LOCUS       WP_235135492              71 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6500 family protein [Lelliottia amnigena].
ACCESSION   WP_235135492
VERSION     WP_235135492.1
KEYWORDS    RefSeq.
SOURCE      Lelliottia amnigena
  ORGANISM  Lelliottia amnigena
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Lelliottia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039799.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20110.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Lelliottia amnigena"
                     /db_xref="taxon:61646"
     Protein         1..71
                     /product="DUF6500 family protein"
                     /calculated_mol_wt=8174
     Region          16..68
                     /region_name="DUF6500"
                     /note="Family of unknown function (DUF6500); pfam20110"
                     /db_xref="CDD:437942"
ORIGIN      
        1 mrqemkekii rvcdakiask ggnvglsfya ffanknddpe llmevahwwi memkldhfek
       61 aekirnlvsa m
//
LOCUS       WP_235135463             131 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Lelliottia amnigena].
ACCESSION   WP_235135463
VERSION     WP_235135463.1
KEYWORDS    RefSeq.
SOURCE      Lelliottia amnigena
  ORGANISM  Lelliottia amnigena
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Lelliottia.
REFERENCE   1  (residues 1 to 131)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 131)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Lelliottia amnigena"
                     /db_xref="taxon:61646"
     Protein         1..131
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=15067
     Region          <44..93
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(59,62,85,92)
                     /site_type="active"
                     /db_xref="CDD:271175"
ORIGIN      
        1 mpitlqhref grsetqnlhf vfipqalrgk qiahysvssi nsiwnvavrk pnirhrrpyq
       61 trhtfacwll saeanpafia iqmahehtqr vytlysawih aldgdktafl nkrtdeytta
      121 pivppvvkkf s
//
LOCUS       WP_235135496             120 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Lelliottia amnigena].
ACCESSION   WP_235135496
VERSION     WP_235135496.1
KEYWORDS    RefSeq.
SOURCE      Lelliottia amnigena
  ORGANISM  Lelliottia amnigena
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Lelliottia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Lelliottia amnigena"
                     /db_xref="taxon:61646"
     Protein         1..120
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=13728
     Region          8..>106
                     /region_name="RobA_TF"
                     /note="MDR efflux pump AcrAB transcriptional activator
                     RobA; NF012228"
                     /db_xref="CDD:467958"
ORIGIN      
        1 mntgafmhdl ldwidnnlds rldiesvarr sgyskwhlqr lfkehtgypl agyiraqklq
       61 ksverlthsd epilnvaial gfdsqqsfnr sfkrlygqap gawrrsiggp qtqqlrlqsr
//
LOCUS       WP_235135505             340 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Lelliottia amnigena].
ACCESSION   WP_235135505
VERSION     WP_235135505.1
KEYWORDS    RefSeq.
SOURCE      Lelliottia amnigena
  ORGANISM  Lelliottia amnigena
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Lelliottia.
REFERENCE   1  (residues 1 to 340)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Lelliottia amnigena"
                     /db_xref="taxon:61646"
     Protein         1..340
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=37948
     Region          79..316
                     /region_name="Hydrolase_4"
                     /note="Serine aminopeptidase, S33; pfam12146"
                     /db_xref="CDD:463473"
ORIGIN      
        1 mkkrfvevlk rkivhalrdt lqrqspsstw nyyvidfisf ndrykqlssl lppakevaey
       61 qiagvnirly eptgsveevl lvyhgggvns dagydilarq mghrgsvctc lidirghgrs
      121 sgykgqvshp qqiwldvdtv iehihtkfpa asihllghss gggmlinyft rytptqksds
      181 lillapefgp fsptemrrsv svpfasveqw pfilnalsag llcgnrfavt lnfpdevlli
      241 kpefvkrysv nmanaltprq parqvaalpl pvtvllaend elfdarimae fiegcgnpni
      301 rsliiershh ldcifnvsee ihhhlkrvvk pacvhtdsgh
//
LOCUS       WP_235135532             343 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase [Lelliottia amnigena].
ACCESSION   WP_235135532
VERSION     WP_235135532.1
KEYWORDS    RefSeq.
SOURCE      Lelliottia amnigena
  ORGANISM  Lelliottia amnigena
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Lelliottia.
REFERENCE   1  (residues 1 to 343)
  AUTHORS   Keller,N.P., Dischinger,H.C. Jr., Bhatnagar,D., Cleveland,T.E. and
            Ullah,A.H.
  TITLE     Purification of a 40-kilodalton methyltransferase active in the
            aflatoxin biosynthetic pathway
  JOURNAL   Appl Environ Microbiol 59 (2), 479-484 (1993)
   PUBMED   8434913
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013087.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00891.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Lelliottia amnigena"
                     /db_xref="taxon:61646"
     Protein         1..343
                     /product="methyltransferase"
                     /GO_function="GO:0008171 - O-methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=37963
     Region          119..322
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
ORIGIN      
        1 mltqtnlsev erkdavylle qsmgfvwqas lraaaelgva drlldgnkta gqlgdelnvd
       61 gvflqrvmri lssrkvfhes pdglfsltpa arflctnhsh slraavlmlt dktfwqpaae
      121 isdivagkqv fkdlfgmsfy dywgqdssat kenvfhagms smssvenevl vecydfpega
      181 tvvdiaggfg nlllnvlrrn pslngilfdq envlagnrlh llgddtrwat vagsffeacp
      241 qadiyllkyi lmdwpdaqas kilqtcrksm kpnsrllile pvikdnnnep gryeidllll
      301 tsfdggrart eqeyadmlad aglklnrvih tpsylsiiea vla
//
LOCUS       WP_235135557             441 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [Lelliottia].
ACCESSION   WP_235135557
VERSION     WP_235135557.1
KEYWORDS    RefSeq.
SOURCE      Lelliottia
  ORGANISM  Lelliottia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Lelliottia"
                     /db_xref="taxon:1330545"
     Protein         1..441
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47233
     Region          30..435
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(38..39,42..43,46,84,142..143,145..147,150,170,
                     173..174,177,260,263..264,267..269,272,300,304,356..357,
                     361,365,381,384..385,388..389,392)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mnnsaqqsld nvtsdreipv vrklrkvlla tgighfvewf dfglygtlaa iigvqffqae
       61 spavallssf avfgagfimr plgglyfgsl gdrigrqkvl atvilltsga tfvmgllptf
      121 sqigiaatvl lvitrliqgf aaggessgat tflaeyapta rrgyftcwid nfgfmafvag
      181 sglvflltat lgeatmsdwg wripfliagp lglvglylrk hledtpefle mvksgkteas
      241 plrtavttaw gallfcvgfv vikavghwtl qtfmpsylst elhyskldsy aittvglfsi
      301 avmvpfmgyl sdkfgrkplm lagcagfilf typammvmar gdmlsailam lllgafiaaf
      361 dgacsaamae lfptsirygg maiaynvava ffggitpwfs aylitstgnp fspayyvmga
      421 alitfltvlr aketagqplr r
//
LOCUS       WP_235135580             137 aa            linear   BCT 02-MAR-2025
DEFINITION  rhodanese-like domain-containing protein [Lelliottia amnigena].
ACCESSION   WP_235135580
VERSION     WP_235135580.1
KEYWORDS    RefSeq.
SOURCE      Lelliottia amnigena
  ORGANISM  Lelliottia amnigena
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Lelliottia.
REFERENCE   1  (residues 1 to 137)
  AUTHORS   Gliubich,F., Gazerro,M., Zanotti,G., Delbono,S., Bombieri,G. and
            Berni,R.
  TITLE     Active site structural features for chemically modified forms of
            rhodanese
  JOURNAL   J Biol Chem 271 (35), 21054-21061 (1996)
   PUBMED   8702871
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00581.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Lelliottia amnigena"
                     /db_xref="taxon:61646"
     Protein         1..137
                     /product="rhodanese-like domain-containing protein"
                     /calculated_mol_wt=15105
     Region          18..128
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            89
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238089"
ORIGIN      
        1 msyvtefpaa dpqesvahfl rrlsvetdca dvhhaitqqe qdfvllhvvg qpeqfarrhl
       61 pgaihlpwsa inaetmaqwp egtlfvvyca gphcngadra alklsriglp vkimiggitg
      121 wedehfafas dersqde
//
LOCUS       WP_235135631             338 aa            linear   BCT 02-MAR-2025
DEFINITION  LacI family DNA-binding transcriptional regulator [Lelliottia
            amnigena].
ACCESSION   WP_235135631
VERSION     WP_235135631.1
KEYWORDS    RefSeq.
SOURCE      Lelliottia amnigena
  ORGANISM  Lelliottia amnigena
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Lelliottia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012576.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00356.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Lelliottia amnigena"
                     /db_xref="taxon:61646"
     Protein         1..338
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=37738
     Region          8..334
                     /region_name="fruct_sucro_rep"
                     /note="D-fructose-responsive transcription factor;
                     TIGR02417"
                     /db_xref="CDD:131470"
ORIGIN      
        1 mrktkritik dvaelagvsk ataslvlngr skelrvaeet rdrvlaiakq hhyqpsihar
       61 slrdnrshti glvvpeitny gfadfshele tlcreagvql lisctdenpg qetvvvnnmv
      121 srqvdgliva ssmlndtdyq klseqlpivl fdrhmndssl pqvitdsitp trelvadiar
      181 qhpdeiyflg gqprlsptrd rlegfkqgla qagvslrpew iihgnyhpss gyemfaalca
      241 qlgrppkavf taacgllegv lrymgqhnll qsdmrlasfd dhylydslai pidtirqdnr
      301 qlawhcfdli gkliegdvpd plqrkldatl qrrhktag
//
LOCUS       WP_235135464             111 aa            linear   BCT 02-MAR-2025
DEFINITION  GlpM family protein [Lelliottia amnigena].
ACCESSION   WP_235135464
VERSION     WP_235135464.1
KEYWORDS    RefSeq.
SOURCE      Lelliottia amnigena
  ORGANISM  Lelliottia amnigena
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Lelliottia.
REFERENCE   1  (residues 1 to 111)
  AUTHORS   Schweizer,H.P., Po,C. and Bacic,M.K.
  TITLE     Identification of Pseudomonas aeruginosa glpM, whose gene product
            is required for efficient alginate biosynthesis from various carbon
            sources
  JOURNAL   J Bacteriol 177 (16), 4801-4804 (1995)
   PUBMED   7642508
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018628.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06942.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Lelliottia amnigena"
                     /db_xref="taxon:61646"
     Protein         1..111
                     /product="GlpM family protein"
                     /calculated_mol_wt=12370
     Region          13..111
                     /region_name="GlpM"
                     /note="Dual-topology membrane protein YdgC, GlpM family
                     [Function unknown]; COG3136"
                     /db_xref="CDD:442370"
ORIGIN      
        1 malllkaalg alvvvligll aktknyyiag liplfptfal iahyivaser giealrttiv
       61 fgmwsiipyf iyllslwyft ammrlplalg gavvcwslsa wvliffwsrf h
//
LOCUS       WP_235135632             185 aa            linear   BCT 02-MAR-2025
DEFINITION  histidine phosphatase family protein [Lelliottia amnigena].
ACCESSION   WP_235135632
VERSION     WP_235135632.1
KEYWORDS    RefSeq.
SOURCE      Lelliottia amnigena
  ORGANISM  Lelliottia amnigena
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Lelliottia.
REFERENCE   1  (residues 1 to 185)
  AUTHORS   Rigden,D.J.
  TITLE     The histidine phosphatase superfamily: structure and function
  JOURNAL   Biochem J 409 (2), 333-348 (2008)
   PUBMED   18092946
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012521.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00300.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Lelliottia amnigena"
                     /db_xref="taxon:61646"
     Protein         1..185
                     /product="histidine phosphatase family protein"
                     /calculated_mol_wt=20468
     Region          1..171
                     /region_name="PhoE"
                     /note="Broad specificity phosphatase PhoE [Carbohydrate
                     transport and metabolism]; COG0406"
                     /db_xref="CDD:440175"
ORIGIN      
        1 meiilmrhgk pvfegisrvt sremadwirh ydssdigrdm ppecsqilas sasriisspl
       61 pralssvntl grepdviddv freaglpilh lpgfrlspvv waaffrvmwl cgisrdvepl
      121 gtakqravqa agilvtvaka sngpvllmgh gvmnrliare lislgmkeyr rqgkkywdag
      181 iyklk
//
LOCUS       WP_235135639              83 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Lelliottia amnigena].
ACCESSION   WP_235135639
VERSION     WP_235135639.1
KEYWORDS    RefSeq.
SOURCE      Lelliottia amnigena
  ORGANISM  Lelliottia amnigena
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Lelliottia.
REFERENCE   1  (residues 1 to 83)
  AUTHORS   Ren,J., Sainsbury,S., Nettleship,J.E., Saunders,N.J. and Owens,R.J.
  TITLE     The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals
            a novel protein fold incorporating a helix-turn-helix motif
  JOURNAL   Proteins 78 (7), 1798-1802 (2010)
   PUBMED   20196080
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013540.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01381.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Lelliottia amnigena"
                     /db_xref="taxon:61646"
     Protein         1..83
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=9227
     Region          1..>62
                     /region_name="HTH_XRE"
                     /note="Helix-turn-helix XRE-family like proteins.
                     Prokaryotic DNA binding proteins belonging to the
                     xenobiotic response element family of transcriptional
                     regulators; cl22854"
                     /db_xref="CDD:473980"
     Site            order(14,18,43)
                     /site_type="other"
                     /note="non-specific DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238045"
     Site            order(17,42)
                     /site_type="active"
                     /note="salt bridge [active]"
                     /db_xref="CDD:238045"
     Site            order(24..25,36,39,43..44)
                     /site_type="other"
                     /note="sequence-specific DNA binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238045"
ORIGIN      
        1 mkittstmla namrdqrkal eltqaeaaer vgmkqttvsg feqnpdtskl etlfrllsal
       61 dlelhvvprg halekdsgwt qew
//
LOCUS       WP_235135819             236 aa            linear   BCT 02-MAR-2025
DEFINITION  YnfC family lipoprotein [Lelliottia amnigena].
ACCESSION   WP_235135819
VERSION     WP_235135819.1
KEYWORDS    RefSeq.
SOURCE      Lelliottia amnigena
  ORGANISM  Lelliottia amnigena
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Lelliottia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018494.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06788.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Lelliottia amnigena"
                     /db_xref="taxon:61646"
     Protein         1..236
                     /product="YnfC family lipoprotein"
                     /GO_component="GO:0005886 - plasma membrane [Evidence
                     IEA]"
                     /calculated_mol_wt=26685
     Region          17..215
                     /region_name="UPF0257"
                     /note="Uncharacterized protein family (UPF0257); cl23914"
                     /db_xref="CDD:420089"
ORIGIN      
        1 mkarlllsll llaisfnvaa ftqfkpavln aallfehdat tgnvkhsiqw irdvngklqa
       61 mtevrydrng cftninmvdk andhefhlvn kdgvltsfkg qritgkiner ceitelenek
      121 gnyvlsynvr glleiiadkn tgevvkryey hnsqfpvrir nykdqkdtri fypsgsaqfa
      181 dseivsktgd ltvrvkqsca ytadgnadkc sliastkddy rgsiliwisn heteyf
//
LOCUS       WP_235135851             346 aa            linear   BCT 02-MAR-2025
DEFINITION  TerY-C metal binding domain-containing protein [Lelliottia
            amnigena].
ACCESSION   WP_235135851
VERSION     WP_235135851.1
KEYWORDS    RefSeq.
SOURCE      Lelliottia amnigena
  ORGANISM  Lelliottia amnigena
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Lelliottia.
REFERENCE   1  (residues 1 to 346)
  AUTHORS   Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Ter-dependent stress response systems: novel pathways related to
            metal sensing, production of a nucleoside-like metabolite, and
            DNA-processing
  JOURNAL   Mol Biosyst 8 (12), 3142-3165 (2012)
   PUBMED   23044854
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026953.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15616.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Lelliottia amnigena"
                     /db_xref="taxon:61646"
     Protein         1..346
                     /product="TerY-C metal binding domain-containing protein"
                     /calculated_mol_wt=38060
     Region          1..191
                     /region_name="TerY"
                     /note="Uncharacterized conserved protein YegL, contains
                     vWA domain of TerY type [Function unknown]; COG4245"
                     /db_xref="CDD:443387"
     Region          217..346
                     /region_name="TerY_C"
                     /note="TerY-C metal binding domain; pfam15616"
                     /db_xref="CDD:406130"
ORIGIN      
        1 mrrlpvffvl dcsesmigen lkkmndglqm ivgdlrkdph aletawvsvi afagiartiv
       61 plheiasfyp prlpvgggts lgaalreltv qidtqvrktt heakgdwkpv vylltdgrpt
      121 ddttaevkrw kdryaskvnl iavglgpsad lnilrqlten vmlftesqeg dftrfikwit
      181 asvtahsrsv gdekqpelsq teyivrlakd eavkaydenc vtltgrcskt rrpylmkyer
      241 pparvsgldf slnlnsfnia gcypidedyf awsdatatgl qvntselhgv pgcphcgnas
      301 afamcscgkl lcidghddvi cpwcekglsf sneggntdfd vnrgrg
//
LOCUS       WP_235135900            1444 aa            linear   BCT 02-MAR-2025
DEFINITION  CotH kinase family protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235135900
VERSION     WP_235135900.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 1444)
  AUTHORS   Nguyen,K.B., Sreelatha,A., Durrant,E.S., Lopez-Garrido,J.,
            Muszewska,A., Dudkiewicz,M., Grynberg,M., Yee,S., Pogliano,K.,
            Tomchick,D.R., Pawlowski,K., Dixon,J.E. and Tagliabracci,V.S.
  TITLE     Phosphorylation of spore coat proteins by a family of atypical
            protein kinases
  JOURNAL   Proc Natl Acad Sci U S A 113 (25), E3482-E3491 (2016)
   PUBMED   27185916
REFERENCE   2  (residues 1 to 1444)
  AUTHORS   Zilhao,R., Naclerio,G., Henriques,A.O., Baccigalupi,L., Moran,C.P.
            Jr. and Ricca,E.
  TITLE     Assembly requirements and role of CotH during spore coat formation
            in Bacillus subtilis
  JOURNAL   J Bacteriol 181 (8), 2631-2633 (1999)
   PUBMED   10198031
REFERENCE   3  (residues 1 to 1444)
  AUTHORS   Naclerio,G., Baccigalupi,L., Zilhao,R., De Felice,M. and Ricca,E.
  TITLE     Bacillus subtilis spore coat assembly requires cotH gene expression
  JOURNAL   J Bacteriol 178 (15), 4375-4380 (1996)
   PUBMED   8755863
  REMARK    Erratum:[J Bacteriol. 1996 Nov;178(21):6407. doi:
            10.1128/jb.178.21.6407-6407.1996.. PMID: 8991897]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020337.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08757.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1444
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..1444
                     /product="CotH kinase family protein"
                     /calculated_mol_wt=154697
     Region          132..471
                     /region_name="CotH"
                     /note="CotH kinase protein; cl26696"
                     /db_xref="CDD:474846"
     Region          <619..694
                     /region_name="CBM6-CBM35-CBM36_like"
                     /note="Carbohydrate Binding Module 6 (CBM6) and CBM35_like
                     superfamily; cl14880"
                     /db_xref="CDD:449372"
     Region          <719..891
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
     Region          <937..1012
                     /region_name="CBM6-CBM35-CBM36_like"
                     /note="Carbohydrate Binding Module 6 (CBM6) and CBM35_like
                     superfamily; cl14880"
                     /db_xref="CDD:449372"
     Region          <1037..1216
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
     Region          <1254..1326
                     /region_name="CBM6-CBM35-CBM36_like"
                     /note="Carbohydrate Binding Module 6 (CBM6) and CBM35_like
                     superfamily; cl14880"
                     /db_xref="CDD:449372"
     Region          1367..1442
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     pfam18962"
                     /db_xref="CDD:436869"
ORIGIN      
        1 mrnlfyltlf wlqclcvhaq ipadnyrfyi degrkmivcn qlpnpsqitg spiqmqfgak
       61 vftfpsnvst lshgvkylit nggqqyslyf tqlplvnlev pdpsqinlee eipggisiae
      121 stttplisnm airirgnsss ffpkknyrvq fkdaqgknkd esilglrsdk rwlffgmwne
      181 elrstnnvsh nlwidmhkly yaasepsafs sirtkyvevf mnksykgvym igedmdrkql
      241 qlkkndgdvt rgelfkaddw slsaawegig vakpapgaed wqsweleypd ysdwnnhhnl
      301 lkaviessda dfkaniwnlf kqenvidyfi flnllsvedn meknyfigry dqgqpwffip
      361 wdldgawgyf pdgvrsnktk gdrqnglfkk lfrtnpdgfk nklatryfql rqnllteanl
      421 knrfqsnynl lnsnliyerd aavsqdnygg pnrsgglayv nnyitqrlaw ldtyfcpmmd
      481 ggcngqssca yeitanasni spacaanvtl ssgctgadca gvtytwsgng inqtgssini
      541 tapgangsyt ytvkasksgc adktatvtln itnctppvgn dpfsacleae sqngngaitg
      601 dpnasngstr gekdnynhyv dyaingvkat gphqvkvryy angaaqgsfs vngnvvlpsa
      661 nfpptyswni vwreetfnvt lnqgnntlri qglpgysirq dkicvtgpgg qnpqeptcnf
      721 niapsankgt yapqeqisfn anctggdcgs vsyawtgnga nasgatanin apaapgsyty
      781 tltaskngca sktvnvtiqv ansqptcafd itasasntap acsanvtlss gctgadcagv
      841 tytwsgngin qtgssinita pgangsytyt vkasksgcad ktatvtlnit nctppvgndp
      901 fsacleaesq ngngaitgdp nasngstrge kdnynhyvdy aingvkatgp hqvkvryyan
      961 gaaqgsfsvn gnvvlpsanf pptyswnivw reetfnvtln qgnntlriqg lpgysirldk
     1021 icvtgpggqn pqeptcnfni apsankgtya pqeqisfnan ctggdcgsvs yawtgngana
     1081 sgataninap aapgsytytl taskngcask tvnvniqvan sqptcafdit asasntapac
     1141 sanvtlssgc tgadcagvty twsgnginqt gssinitapg angsytytvk askggcadkt
     1201 atvtltitnc nppvggnfsl clesenqsgn gaitgdpnas ngstrgvked ynhyvdyavn
     1261 gvpsagvyql klrysasstp niaisvngnt aiastnvpat htwnivfree vfnvtlaagn
     1321 ntvriqglng psirqdklcv tnsgsnarmg vpenlfklag pderlnvfpn pspgefnakf
     1381 slssddegti tvtdirgrvw htskvkgngt hdekiklpna pagiyliqik ngkttdvrkl
     1441 liaq
//
LOCUS       WP_235135911             295 aa            linear   BCT 02-MAR-2025
DEFINITION  class I SAM-dependent methyltransferase [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235135911
VERSION     WP_235135911.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 295)
  AUTHORS   Martin,J.L. and McMillan,F.M.
  TITLE     SAM (dependent) I AM: the S-adenosylmethionine-dependent
            methyltransferase fold
  JOURNAL   Curr Opin Struct Biol 12 (6), 783-793 (2002)
   PUBMED   12504684
  REMARK    Erratum:[Curr Opin Struct Biol. 2003 Feb;13(1):142]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022137.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10672.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..295
                     /product="class I SAM-dependent methyltransferase"
                     /EC_number="2.1.1.-"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=33604
     Region          <128..234
                     /region_name="RlmK"
                     /note="23S rRNA G2069 N7-methylase RlmK or C1962
                     C5-methylase RlmI [Translation, ribosomal structure and
                     biogenesis]; COG1092"
                     /db_xref="CDD:440709"
ORIGIN      
        1 millapeqht dyelidtggf eklerfgpyi lsrpepqaiw dkslseaewe krsnavfkrd
       61 knsqekgqwi akdgmpdkwv fqyrtnalhl rsklalssfk hvgvfpeqat nwdyiaktlk
      121 qipetkpsvl nlfaytgias laakasgadv thvdsvkqvi swsrenmels gldnirwvve
      181 dalkfvqrev rrgnqyngii ldppaygrgp dgekwllees lneilrlcal llkkenfffi
      241 inlyslgfsa livenlikah fgtqihhefg elyipdsfgk nlplgvfsrf sdqnv
//
LOCUS       WP_235135956             435 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Dyadobacter fanqingshengii].
ACCESSION   WP_235135956
VERSION     WP_235135956.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..435
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=46146
     Region          11..418
                     /region_name="PLN00028"
                     /note="nitrate transmembrane transporter; Provisional"
                     /db_xref="CDD:177665"
ORIGIN      
        1 mettnkplek lnifsfkgvq mrtfhltwma fflcffgwfg laplmtvikt dlgltksqig
       61 niiiasvaat vvariaigkl cdtwgprkty aalmgicsip vmsvglvhsy egfllfrlai
      121 gvigasfvit qyhtsvmfdk kivgtanava ggwgnlgggi tnmvmplvfa gfvgmgylpe
      181 sawriamvip gvflfifafv yyrftkdtpa gnfedleitn pkavktkgtl aiamkdprtw
      241 glflaygacf gieitfdnva alyffenfet slatagilag afgfmnifar avggivadkv
      301 gnkygmigkg kllalllace gigialfaqs gsivaavvtm lcfamflkma ngvtyaivpf
      361 inqkaigsvs givgaggnvg avlagflfks seisysqafm yigvaiacia avvalinfdk
      421 trsvitegal epaea
//
LOCUS       WP_235135981             613 aa            linear   BCT 02-MAR-2025
DEFINITION  exo-alpha-sialidase [Dyadobacter fanqingshengii].
ACCESSION   WP_235135981
VERSION     WP_235135981.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13088.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..613
                     /product="exo-alpha-sialidase"
                     /EC_number="3.2.1.18"
                     /calculated_mol_wt=68765
     Region          <266..356
                     /region_name="BNR_2"
                     /note="BNR repeat-like domain; pfam13088"
                     /db_xref="CDD:463781"
ORIGIN      
        1 mpdiklkitt lvavlcmqls haqdtirytg ktlvnvdyhh galtpaigvh syqtlrvnrd
       61 dpgkdsaitw tynhapnlay wnetfylnyl snpvgehipp gqtllqtskd grtwskpvvl
      121 fppykipdgt tkkthsgtak dlyavmhqrm gfyvsknkkl ltlayygial dakddpndgn
      181 gigrvvreik kdgsfgpiyf irpnaswkqk sdyplftesr dkefvnacee llanklvtqq
      241 wveeadrddp lislkgeyka lsayhlpdgr vvglwknalt smskdngatw lykpkrapgf
      301 vnsnakiwgq ktsdgkyati ynpsefrwpl avsvsddgin yknlllvnge itamryggny
      361 ksygpqyprg isegdgtppd gklwvsysmn kediwissip vpiksvaekh aadrfndlpv
      421 gkelsewniy splwaavsie kgedraklls lkdsdpfdya kaervipatk qliaeisvep
      481 kqsdhglldi efqdakgtpg vrlsfdstgn frakagyrnk slmpykpgek yeirvqlnte
      541 trlysvtvng knlgnnilfa plesisritf rtgdthrfpn adtptdqmyd lpnagrkdre
      601 avyniryvts kad
//
LOCUS       WP_235135291             164 aa            linear   BCT 02-MAR-2025
DEFINITION  surface-adhesin E family protein [Lelliottia amnigena].
ACCESSION   WP_235135291
VERSION     WP_235135291.1
KEYWORDS    RefSeq.
SOURCE      Lelliottia amnigena
  ORGANISM  Lelliottia amnigena
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Lelliottia.
REFERENCE   1  (residues 1 to 164)
  AUTHORS   Singh,B., Al-Jubair,T., Morgelin,M., Thunnissen,M.M. and
            Riesbeck,K.
  TITLE     The unique structure of Haemophilus influenzae protein E reveals
            multiple binding sites for host factors
  JOURNAL   Infect Immun 81 (3), 801-814 (2013)
   PUBMED   23275089
REFERENCE   2  (residues 1 to 164)
  AUTHORS   Ronander,E., Brant,M., Eriksson,E., Morgelin,M., Hallgren,O.,
            Westergren-Thorsson,G., Forsgren,A. and Riesbeck,K.
  TITLE     Nontypeable Haemophilus influenzae adhesin protein E:
            characterization and biological activity
  JOURNAL   J Infect Dis 199 (4), 522-531 (2009)
   PUBMED   19125675
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028057.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16747.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Lelliottia amnigena"
                     /db_xref="taxon:61646"
     Protein         1..164
                     /product="surface-adhesin E family protein"
                     /calculated_mol_wt=18291
     Region          45..143
                     /region_name="Adhesin_E"
                     /note="Surface-adhesin protein E; pfam16747"
                     /db_xref="CDD:407016"
ORIGIN      
        1 mkkltwmvll mltgctgttk pqpqtpakap aglikilede sitsyvdfrv istyqgnshl
       61 rrfyfinnya ertliiknpp vyvsssraid vincdknqra vmgrslfskp faegdlvhag
      121 ldvgqwetyp kdslfgiiae smcsipvekl kpepakenrk plld
//
LOCUS       WP_235136002             519 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase [Dyadobacter fanqingshengii].
ACCESSION   WP_235136002
VERSION     WP_235136002.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025938.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14587.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..519
                     /product="glycoside hydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /calculated_mol_wt=56227
     Region          37..399
                     /region_name="Glyco_hydro_30"
                     /note="Glycosyl hydrolase family 30 TIM-barrel domain;
                     cl23815"
                     /db_xref="CDD:451560"
     Region          428..513
                     /region_name="Glyco_hydro_30C"
                     /note="Glycosyl hydrolase family 30 beta sandwich domain;
                     pfam17189"
                     /db_xref="CDD:465376"
ORIGIN      
        1 mnptkqllst llfaltltsc ssatpgtvng pggkaepiti tinpaktfqt iehfgasdaw
       61 scqfvgnwpd vkrngiadll fssdtlgngk pkgiglslwr fnigagtaeq gdasgikdew
      121 rraesflnnd gtynwnkqag qiwflkaake rgvseflafp nsppvqytvn kkgyanggkp
      181 nltaehfdkf gdfmanvvsg vrektgitfn hispvnepqw dwsdggqegt pffnneiagi
      241 akslsaslik nklptkidia eagqidylys efnkqgrgnq ihaffdktsp dyignlpnlt
      301 qtisghsyft tspyskaask rqeiakalqt tpglkywmse ycilgdnege ingsgrdlgi
      361 gagiyiakvi hndlvnasas awhwwiaisp ynykdgliyi dknktdgsyq sskmlwalgn
      421 ysrfvrpgav rtevsassas egllissykn tdnllvtvii ndqqtaadia ldlpgyklsn
      481 mkiyktsats dlesspvsag spvtveaksi vtivgrlaq
//
LOCUS       WP_235135986             783 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5703 domain-containing protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235135986
VERSION     WP_235135986.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039200.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18961.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..783
                     /product="DUF5703 domain-containing protein"
                     /calculated_mol_wt=89086
     Region          35..326
                     /region_name="DUF5703_N"
                     /note="Domain of unknown function (DUF5703); pfam18961"
                     /db_xref="CDD:465933"
ORIGIN      
        1 msilsrslis fflylcliks alaqtlspet ynvkwtsqsk nsgesmpvgg gdmglnvwve
       61 kgdvlfylsr sgafdennif pklgrvrvtl spnpftdgat frqelklqeg sveiagksgn
      121 qevvlkiwvd vfnpvvhvdv agnkpvqvna wyeswrtqdr elqgreknas sfkwlkdkvi
      181 askdivnahe ngilfyhqnk dstlfdlavk qqqlepvksq lwnplkgmvy ggwmqgenmv
      241 pdvangqlkt vsgkyvntpf lgfglksraa arahhlnvfl hieensdaek wkngltkivs
      301 kaesekktar qktldwwnay wrrshiainv ekpdpaspiw qvgrnyqifr ymlgcnafga
      361 yptkfngglf thdpvfidst ltfgpdyrsw gggtftaqnq rlvywpmlks gdfdmmssqf
      421 dfylrilsna etrtrhywgh qgasfteqie nfglpnyaey gqkrpkdfds gveynawley
      481 lwdtslefcl mmldierftg sdiskylpli esctvffdqh yqylaekrga kkldqnghlv
      541 ifpgsaaety kmtynsvttv aglktvlsrm lalpakygtd tqrkewatrl grvpplsfrq
      601 mqghqtiapa raweriqnte ipqlypvfpf gmygiglpdl evavntwkyd teaiknrnht
      661 swhqdnifca rlglteeaaa lavkklqdsg rrfpafwgpg hdwvpdhnwg gsgmiglqem
      721 lmqtvgdsic lfpawpkdwn vkfklhapyk ttvegelqng elvhlkvtpe srrkdlviae
      781 lfk
//
LOCUS       WP_235136020             209 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome c biogenesis protein CcdA [Dyadobacter fanqingshengii].
ACCESSION   WP_235136020
VERSION     WP_235136020.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 209)
  AUTHORS   Missiakas,D., Schwager,F. and Raina,S.
  TITLE     Identification and characterization of a new disulfide
            isomerase-like protein (DsbD) in Escherichia coli
  JOURNAL   EMBO J 14 (14), 3415-3424 (1995)
   PUBMED   7628442
REFERENCE   2  (residues 1 to 209)
  AUTHORS   Crooke,H. and Cole,J.
  TITLE     The biogenesis of c-type cytochromes in Escherichia coli requires a
            membrane-bound protein, DipZ, with a protein disulphide
            isomerase-like domain
  JOURNAL   Mol Microbiol 15 (6), 1139-1150 (1995)
   PUBMED   7623667
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014713.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02683.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..209
                     /product="cytochrome c biogenesis protein CcdA"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /calculated_mol_wt=22969
ORIGIN      
        1 mvnillldsl llgvqhsfep dhmaavsvla sedtrspaqr wkliwrsshw alghsftlil
       61 favlvlllks tvtldvsekv ellvgplmiw lgvmairrnf lkdrtlhlyn pqqkfsrsfw
      121 vgmvhglagt ggacavaltl aasdaltavw iiilqsvgii lsmsaygyff atsvnrfagk
      181 retflkiiny vvgifsiiig aitlyesfa
//
LOCUS       WP_235135615             270 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: BsuBI/PstI family type II restriction endonuclease,
            partial [unclassified Enterobacter].
ACCESSION   WP_235135615
VERSION     WP_235135615.1
KEYWORDS    RefSeq.
SOURCE      unclassified Enterobacter
  ORGANISM  unclassified Enterobacter
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter.
REFERENCE   1  (residues 1 to 270)
  AUTHORS   Steczkiewicz,K., Muszewska,A., Knizewski,L., Rychlewski,L. and
            Ginalski,K.
  TITLE     Sequence, structure and functional diversity of PD-(D/E)XK
            phosphodiesterase superfamily
  JOURNAL   Nucleic Acids Res 40 (15), 7016-7045 (2012)
   PUBMED   22638584
REFERENCE   2  (residues 1 to 270)
  AUTHORS   Xu,G.L., Kapfer,W., Walter,J. and Trautner,T.A.
  TITLE     BsuBI--an isospecific restriction and modification system of PstI:
            characterization of the BsuBI genes and enzymes
  JOURNAL   Nucleic Acids Res 20 (24), 6517-6523 (1992)
   PUBMED   1480472
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018339.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06616.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="unclassified Enterobacter"
                     /db_xref="taxon:2608935"
     Protein         <1..270
                     /product="BsuBI/PstI family type II restriction
                     endonuclease"
                     /GO_function="GO:0000287 - magnesium ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0009036 - type II site-specific
                     deoxyribonuclease activity [Evidence IEA]"
                     /GO_process="GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
     Region          100..258
                     /region_name="BsuBI_PstI_RE"
                     /note="BsuBI/PstI restriction endonuclease domain;
                     pfam06616"
                     /db_xref="CDD:429034"
ORIGIN      
        1 rplmagssps lpdgsnpsaa ivqsasdvqc srllkttpvt tplpkyamsk afaalfnvdl
       61 igddlealir swqnshlnaa alsrirllga hataaasdqi tatlpnsglv mlesgpsgvi
      121 gkavieqfar kflktpavlw lsqsgekvgi dlasrlklki dpsktlpdvi lvdlgtktdg
      181 sdmlfvfiei vasdgpinsm rkqklteiai eagfsaqnla fvtafqdrsa apfkkamsel
      241 awgtyawfcs epdnlielrd gssiilsell
//
LOCUS       WP_235136091             214 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2306 domain-containing protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235136091
VERSION     WP_235136091.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021576.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10067.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..214
                     /product="DUF2306 domain-containing protein"
                     /calculated_mol_wt=24149
     Region          63..208
                     /region_name="DUF2306"
                     /note="Predicted membrane protein (DUF2306); cl02232"
                     /db_xref="CDD:470499"
ORIGIN      
        1 mmdnqisnkp vlsldrsdiv pvllwavvvf ltwlfmhgad hflaltpaal gkyfelrwvl
       61 iahitaggga lvmglvqfwp klrsfswklh rvigllylma illssicavi lafstayevn
      121 wayafslqiw vgvwisstai ayyaalkrkf qlhqewmvrs ylvtlafiis glavklpyiq
      181 slgsfaeisp slfwmgwsvp lyiyqvilsg rark
//
LOCUS       WP_235136092             256 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Dyadobacter fanqingshengii].
ACCESSION   WP_235136092
VERSION     WP_235136092.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..256
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=26634
     Region          1..251
                     /region_name="PRK06500"
                     /note="SDR family oxidoreductase"
                     /db_xref="CDD:235816"
ORIGIN      
        1 mnrlenkvav itggnsgigf giaeafrneg avgaitgrnq ttldksveal gtgfigikgn
       61 vtnvedlent fkqtsdafgk idvlvvnagg vvdgvplgsi gdvteqgydl ymdlnlksay
      121 ftvqkalpym ndgasiilig ssaahraapg maiysaakaa iislakglsl dllsrkirvn
      181 alspgsidtp vfeklvpeeq leqvkqiwid itpvarqglp sdignaavfl asddssfivg
      241 teilsdggmt nislmk
//
LOCUS       WP_235136109             171 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235136109
VERSION     WP_235136109.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 171)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 171)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13669.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..171
                     /product="VOC family protein"
                     /calculated_mol_wt=18803
     Region          15..152
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 megiddiisk lefaqicwvv keidaaadff skslgiptfp apelvraqdl gmtyygevva
       61 gewlttqayn gltfvelvqp lsgqsmfhdy lnqypaggaq hfayrlsvsd feevveklra
      121 sgysiisevd hpiarmaffd tyqtigavte imgitpegws aveqmkngng q
//
LOCUS       WP_235136113             216 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235136113
VERSION     WP_235136113.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..216
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=24674
     Region          2..206
                     /region_name="PRK15369"
                     /note="two component system response regulator"
                     /db_xref="CDD:185267"
ORIGIN      
        1 mnialidehy ilidalkrll vqlpdvtkvt tytqseafls ensinppdil vldlglkgwk
       61 gmellsycrt nlgkdmkviv istatdtqti rqsirrgans flsktttfae fkesiyqvrc
      121 gnqyiekalr ddlingifvd divvlhlspr ekqvlqkicd gqtikeiafe lrlsihtiqy
      181 yhrnvmdklq vrrttdlivy amqhglylpk enclpv
//
LOCUS       WP_235136123             272 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Dyadobacter fanqingshengii].
ACCESSION   WP_235136123
VERSION     WP_235136123.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12697.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..272
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=29008
     Region          35..270
                     /region_name="PLN02211"
                     /note="methyl indole-3-acetate methyltransferase"
                     /db_xref="CDD:215128"
     Region          36..>134
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
ORIGIN      
        1 mkfvnlpiwa tslllsllli scsedhapqa stktyllvhg ashgawawkk vvpllqaqgh
       61 rvvaidlpgh gddktpperv tledyvnrvv dvanaqagpv ilvghsaggv siaqaaerlq
      121 agkveklifl daflpksges vfslaakflp psttgepnfs dsflfdptga tftldtarva
      181 nflyqdcsaa dvlfakanlg rqpvapfatp vqltdtkygt ipkyfiicsk akngdmtama
      241 knvamnkvvt lstshspffs qpkaltelil sl
//
LOCUS       WP_235136134              94 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235136134
VERSION     WP_235136134.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..94
                     /product="phosphopantetheine-binding protein"
                     /calculated_mol_wt=10544
     Region          21..85
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; cl09936"
                     /db_xref="CDD:447865"
ORIGIN      
        1 mdqlissytf rllsnaefpy nmdiefvird ilikkfnvag dvinanaefk kdlgldsldv
       61 mdlvielevv sdpeaenifl fsdavacvqr iink
//
LOCUS       WP_235136142             169 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF892 family protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235136142
VERSION     WP_235136142.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 169)
  AUTHORS   Hindupur,A., Liu,D., Zhao,Y., Bellamy,H.D., White,M.A. and Fox,R.O.
  TITLE     The crystal structure of the E. coli stress protein YciF
  JOURNAL   Protein Sci 15 (11), 2605-2611 (2006)
   PUBMED   17001035
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017758.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05974.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..169
                     /product="DUF892 family protein"
                     /calculated_mol_wt=19487
     Region          15..157
                     /region_name="Ferritin_like"
                     /note="Ferritin-like superfamily of diiron-containing
                     four-helix-bundle proteins; cl00264"
                     /db_xref="CDD:469698"
     Site            order(29,59,62,118,151,153)
                     /site_type="other"
                     /note="dinuclear metal binding motif [ion binding]"
                     /db_xref="CDD:153097"
ORIGIN      
        1 mqesdsinvd kgdleeffah hlnkiytakt llvselpqll dnahftdlre aidhtiedvk
       61 qqilrmdkiy ellpiafskv hsngmngmme dsfsdiklhs dnpelrdmsi lfylqtieci
      121 ematfqvlem vfvklkndqv kklirqnyea skadrtlfll isakyistv
//
LOCUS       WP_235136173             513 aa            linear   BCT 02-MAR-2025
DEFINITION  M12 family metallopeptidase [Dyadobacter fanqingshengii].
ACCESSION   WP_235136173
VERSION     WP_235136173.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 513)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013559.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01400.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..513
                     /product="M12 family metallopeptidase"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=57178
     Region          101..273
                     /region_name="ZnMc"
                     /note="Zinc-dependent metalloprotease. This super-family
                     of metalloproteases contains two major branches, the
                     astacin-like proteases and the adamalysin/reprolysin-like
                     proteases. Both branches have wide phylogenetic
                     distribution, and contain sub-families, which...; cl00064"
                     /db_xref="CDD:469599"
     Site            order(176..177,180,186)
                     /site_type="active"
                     /db_xref="CDD:238124"
ORIGIN      
        1 mktnhlpiwa tcsllilfll nsckddlndk spvavsdvvk dssaygfkng nfrgmpivyn
       61 evdgqaifeg dimisdedll rdsnartsga gmankiyrwk nyvipyevgp gldedklwlv
      121 mgdieektpi qfvkrtsetd yirfekysrn csnvgriggk qfvklasdtd vaaithalgh
      181 viglfhehtr qdrdnyitin wnniwenkre yfnrwpvgqg fdlgpfdyys amifnyneys
      241 qngkptitek ggniiipsky ftkgdidail smysniyivk ngslfglnpk dggmvnlgag
      301 wdgalkslaq ddeyiwgiqg gklwktnrfn gayeqvgtdd wtgtkcltgr dglgnfyavy
      361 qnrlykvnkn gqrtqlgsre wpavktiyyh kdklyvawgl llnkvnattg eieqtfgklq
      421 wadtrsiaam dassneiyvl rgdalfrvnt itgevaggek fpgasmmtgt snklylvtgd
      481 yltsvtayse kkivakglsg ttsigsigna min
//
LOCUS       WP_235136185             245 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235136185
VERSION     WP_235136185.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..245
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=28459
     Region          52..>116
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cl21578"
                     /db_xref="CDD:473914"
     Region          <189..245
                     /region_name="CitB"
                     /note="DNA-binding response regulator, NarL/FixJ family,
                     contains REC and HTH domains [Signal transduction
                     mechanisms, Transcription]; COG2197"
                     /db_xref="CDD:441799"
ORIGIN      
        1 mktffdgsve dsnevnsltl npkssvsnei ikyletlfpg rvilwcskea gfwlysenta
       61 qfygltpeel grktyldyrn mihpddlegy dlcnrkirqi lesdinpehw gqyrfvihyr
      121 vwrkseyfql reeriipppg qkpgghhslm sdatedypfv cvqlewyrvg plgytkinny
      181 tpknqestls greseiikll aegfnskqia dqlfisvntv rnhranllrk tnsrnliqvl
      241 ktasq
//
LOCUS       WP_235136196             272 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Dyadobacter fanqingshengii].
ACCESSION   WP_235136196
VERSION     WP_235136196.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12697.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..272
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=29068
     Region          35..270
                     /region_name="PLN02211"
                     /note="methyl indole-3-acetate methyltransferase"
                     /db_xref="CDD:215128"
     Region          36..>134
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
ORIGIN      
        1 mkfvnlpiwa tslllsllli scsedhapqa stktyllvhg ashgawawkk vvpllqaqgh
       61 rvvaidlpgh gddktpaerv tlddyvnkvv nvanaqagpv ilvghsaggv siaqaaerle
      121 tgkveklifl daflpksges vfslaakflp psttgepnfs dnflfdptga tftldtarva
      181 nflyhdcsaa dvlfakanlg rqpvapfatp vqltdtkygt ipkyfiicsq akngdmtama
      241 knvvmnkvvt lstshspffs qpkaltelil sf
//
LOCUS       WP_235136216             259 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: SDR family NAD(P)-dependent oxidoreductase
            [Dyadobacter].
ACCESSION   WP_235136216
VERSION     WP_235136216.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
REFERENCE   1  (residues 1 to 259)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 259)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..259
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=28001
     Region          1..246
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(8,10..11,13,32..34,89..91,148,152,176..179)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187654"
ORIGIN      
        1 marvfitgfv dglgqltana lvhkghsvvl harnrersky glamvpgaea vltgdlssie
       61 etinlaaqvn rlgnfdavih nagvyqvqes kltqdglppl faintiapyi ltclikepkh
      121 liytssgmhk qadpnltgln keslniaysd skfhnlilam avarlrpaiy anavdpgwvp
      181 tklggtgapd nldkgfatqv wlavssdeqa kisgkylhhq kpdrylrqad qvvvqekfls
      241 fcqnltsiai pfgakdvts
//
LOCUS       WP_235136224             404 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [Dyadobacter].
ACCESSION   WP_235136224
VERSION     WP_235136224.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..404
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=43138
     Region          1..365
                     /region_name="nepI"
                     /note="purine ribonucleoside efflux pump NepI; PRK10213"
                     /db_xref="CDD:182309"
ORIGIN      
        1 mkeeksitti qepkwvavys islavaglit seflpvsilt piardlhvte gvagqaisvt
       61 alvamfsslf tamltkkidr rwvllsfsvl qiisnilvsq assfgilmag rvllgiavgg
      121 fwamstattm rlvpqhlisk alsivfaavs fatvlaaplg sfldgmigwr nvfllvsgig
      181 viafiwqalv lppmppsspp qlrtlisvvr repvkrgmlg vtfsfagyai fftylrpfle
      241 nithvpvpil ttilliygaa nffgaiiarf midknfsltm vamsfsmsiv talliflggn
      301 milaslfiav wgfafgsvqv gwptwitlav pdeaesggsv lvattqlait lgaglgglvf
      361 dhvgiegtfg mgslvwlcag waiwramkgr vwkaasssgs mvhl
//
LOCUS       WP_235136074             310 aa            linear   BCT 02-MAR-2025
DEFINITION  heme-binding domain-containing protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235136074
VERSION     WP_235136074.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 310)
  AUTHORS   Yamada,H., Takashima,E. and Konishi,K.
  TITLE     Molecular characterization of the membrane-bound quinol peroxidase
            functionally connected to the respiratory chain
  JOURNAL   FEBS J 274 (3), 853-866 (2007)
   PUBMED   17288564
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025734.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14376.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..310
                     /product="heme-binding domain-containing protein"
                     /calculated_mol_wt=34524
     Region          18..143
                     /region_name="Haem_bd"
                     /note="Haem-binding domain; pfam14376"
                     /db_xref="CDD:464158"
     Region          176..310
                     /region_name="cyt_P460_Mc-like"
                     /note="cytochrome P460 from Methylococcus capsulatus
                     (Bath) and similar proteins; cd20753"
                     /db_xref="CDD:410960"
     Site            order(184..186,188..189,192..197,201,203,232,241..243,245,
                     248,296,305,307,309..310)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:410960"
     Site            order(193,195,202,227,229,252..254,269..271,289..290,
                     293..294,303..306)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410960"
ORIGIN      
        1 mkkpgftfyr gaaimvvvif lglqtssppi enppvtseia vpaevkqile racydchsne
       61 akvewfdkia pasflvghdi eearsrfnfs ewdknpagvq elllwqmvna ieqgkmplkr
      121 yqlahpggkv seselavlkk yvntlpgrhk vdtarivaqt ssiekvsaqk tpvslngipy
      181 sedyknwkii svtdkfdggs mrivygndim vkaiekrelp fpdgarivkv vwgkqaedkd
      241 gnvlpgnfqn aqfmikdskk ysategwgfa kfdgldlkpa gktilfeqtc anchrllape
      301 ndfvfniptk
//
LOCUS       WP_235136235             282 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235136235
VERSION     WP_235136235.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..282
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=31646
     Region          <115..275
                     /region_name="PRK10572"
                     /note="arabinose operon transcriptional regulator AraC"
                     /db_xref="CDD:236717"
     Region          197..275
                     /region_name="HTH_18"
                     /note="Helix-turn-helix domain; pfam12833"
                     /db_xref="CDD:432818"
ORIGIN      
        1 misipnasle svikdsfsin mlngqmhiak crlayhriim vqsgsgsisv deqayelnsp
       61 qlllvakgqi ltgadlritg yelsfgdcfw erapqsannc kavlfnnasa nqfillnemt
      121 saelsplfea iyqehrrvdy inkldamaay lkiimikian inaallhgyd dydkqlyrrf
      181 veqvsqhyqg lhdvnyyaal lnvtprrlsd vcksscgkga kqiingqlva eakrrlqfst
      241 lpvkeiayql sfstpeqfss ffkknvsasp tdyrayfvni gr
//
LOCUS       WP_235136242             141 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA-directed RNA polymerase subunit alpha C-terminal
            domain-containing protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235136242
VERSION     WP_235136242.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   Murakami,K., Kimura,M., Owens,J.T., Meares,C.F. and Ishihama,A.
  TITLE     The two alpha subunits of Escherichia coli RNA polymerase are
            asymmetrically arranged and contact different halves of the DNA
            upstream element
  JOURNAL   Proc Natl Acad Sci U S A 94 (5), 1709-1714 (1997)
   PUBMED   9050843
REFERENCE   2  (residues 1 to 141)
  AUTHORS   Jeon,Y.H., Negishi,T., Shirakawa,M., Yamazaki,T., Fujita,N.,
            Ishihama,A. and Kyogoku,Y.
  TITLE     Solution structure of the activator contact domain of the RNA
            polymerase alpha subunit
  JOURNAL   Science 270 (5241), 1495-1497 (1995)
   PUBMED   7491496
REFERENCE   3  (residues 1 to 141)
  AUTHORS   Ebright,R.H. and Busby,S.
  TITLE     The Escherichia coli RNA polymerase alpha subunit: structure and
            function
  JOURNAL   Curr Opin Genet Dev 5 (2), 197-203 (1995)
   PUBMED   7613089
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015102.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03118.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..141
                     /product="DNA-directed RNA polymerase subunit alpha
                     C-terminal domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA]"
                     /GO_process="GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /calculated_mol_wt=16350
     Region          <86..131
                     /region_name="RpoA"
                     /note="DNA-directed RNA polymerase, alpha subunit/40 kD
                     subunit [Transcription]; COG0202"
                     /db_xref="CDD:439972"
ORIGIN      
        1 maknkietee ilkasyrvel firkfekqiq taliyepsds irqdiqvlne fvknqkmlie
       61 darkslsrny dykgnyldte ivstplstrt slclksadii tvkdlieakn kyglshfknf
      121 rnfgktayde vvrfinives l
//
LOCUS       WP_235136271             184 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4833 domain-containing protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235136271
VERSION     WP_235136271.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027443.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16117.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..184
                     /product="DUF4833 domain-containing protein"
                     /calculated_mol_wt=21115
     Region          42..176
                     /region_name="DUF4833"
                     /note="Domain of unknown function (DUF4833); pfam16117"
                     /db_xref="CDD:465027"
ORIGIN      
        1 mkshptnkvv eylvilfltt yvlpgyaqeg ypvppfnknr lfyiqhsknh ntfvydafiq
       61 dgniqadkpv nvykiayten gkrtpltliq rkfafgiksk hlsanvyemq laaskkvtfy
      121 lnlvksgmpk vyvtvnnrkm fldriflkik egtsgikvkl dyalfygkdf dtgqniiert
      181 vpke
//
LOCUS       WP_235136275             298 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235136275
VERSION     WP_235136275.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024554.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13155.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..298
                     /product="toprim domain-containing protein"
                     /calculated_mol_wt=34066
     Region          203..289
                     /region_name="Toprim_2"
                     /note="Toprim-like; pfam13155"
                     /db_xref="CDD:463793"
ORIGIN      
        1 mserergsrg lltlaeirei dligylselg fepvkvhsad hwylsplrde rtasfkvnrr
       61 lnrwydrgis lggnlidfat ifyqcsvgev ikifsdywsf hrpkillpst ekaaancpiq
      121 vlytgqltsk tlldyivsrs vspdiarqyc rqvnyqigdr ryfeigllnn sggyelrnsy
      181 sklasspkdi ttinvgaltv smfegmfdfl syktlmrkmt eqpenyviln sislfdrarp
      241 fleshynidl yfdrdtagvr ststvkdise kyndasgmyt gykdfnewla stsssqks
//
LOCUS       WP_235136280              99 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxypeptidase regulatory-like domain-containing protein
            [Dyadobacter fanqingshengii].
ACCESSION   WP_235136280
VERSION     WP_235136280.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13620.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..99
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /calculated_mol_wt=11183
     Region          19..>58
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
ORIGIN      
        1 mtqikraair spflfvravr dadtglplvg atvslspaea gtitdpqgtf rfdvlpvgrc
       61 wknidveyse tlkttlyeaq shysvkrkdy frpdlrwef
//
LOCUS       WP_235136288             407 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Dyadobacter fanqingshengii].
ACCESSION   WP_235136288
VERSION     WP_235136288.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 407)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..407
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=43780
     Region          30..300
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     Region          <339..406
                     /region_name="cpPDZ_Deg_HtrA-like"
                     /note="permuted PDZ domain of Deg/high-temperature
                     requirement factor A (HtrA) family of housekeeping serine
                     proteases and related domains; cl49614"
                     /db_xref="CDD:483954"
ORIGIN      
        1 mkyllllvla ctsllssaqq fqaaairkhi eflasdemeg rgtgslgeir sanyiatifg
       61 elglkpagsd aaffqpfqvk ysiegnlhqv tgrnvagfld ngakktivig ahydhlgkgf
      121 qgsslspdsr nkihngaddn asgttgllel akyftknnit ekhnylflaf sgeelgllgs
      181 khftesptvp ltaiscminm dmigrlsdek giivsgwgts pvwgklipgl akaqnlkytv
      241 dssgvgasdh tsfylknipv vqfftgghgd yhkvsddier infdgeakil siiagllenl
      301 dketvdpqfv aaanphtgdk ttdfkvtlgv mpdysysgkg lkidgvskar paekagiqag
      361 diikklagke itsiydymev lgkhekgekv eaeflrgset kkvsvtf
//
LOCUS       WP_235136332             563 aa            linear   BCT 02-MAR-2025
DEFINITION  GH39 family glycosyl hydrolase [Dyadobacter fanqingshengii].
ACCESSION   WP_235136332
VERSION     WP_235136332.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013400.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01229.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..563
                     /product="GH39 family glycosyl hydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=63777
     Region          28..563
                     /region_name="XynB"
                     /note="Beta-xylosidase [Carbohydrate transport and
                     metabolism]; COG3664"
                     /db_xref="CDD:442881"
ORIGIN      
        1 msfqkllvya liifgshlve aqetkqkpvt ievnlsaekg pakpiwawfg ydepnytymk
       61 dgkkllteis qlskvpvyvr ahsmlvtgdg vaalkwgstn vytedkkgnp vydwtvvdki
      121 fdtyiergmr piaqigfmpe alsskpqpyr hfwkpgdnyn diytgwaypp ndykkfaelv
      181 fqwvkhsier ygkaeveswy welwnepnis ywkgtteeyi klydysadav kralptakig
      241 gpevtgpnwd vsakffrtfl dhvvsgknyv tgktgspldf itfhakgspk vvdgivrmdm
      301 gtqlrdidkg feivasypsl knlpiiiges dpegcaacse dlhpqnayrn gtmyssytaa
      361 sfarkhelad argvnllgav twafefedqp wfrgfrdlat ngvdkpvlnv frmfgmmdgn
      421 rvevkqnlay nfeklkkesv rgerdinafa tknaqeaavm vwnyhddnki vgaspirlqi
      481 nglaakrvqv qhyridqehs nsyevwkkmg spqkptaeqi avlesagqlq tltspqwvnv
      541 ekgkiqldfa lpaqgvsllk iiw
//
LOCUS       WP_235136365             765 aa            linear   BCT 02-MAR-2025
DEFINITION  PAS domain-containing protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235136365
VERSION     WP_235136365.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 765)
  AUTHORS   Hefti,M.H., Francoijs,K.J., de Vries,S.C., Dixon,R. and Vervoort,J.
  TITLE     The PAS fold. A redefinition of the PAS domain based upon
            structural prediction
  JOURNAL   Eur J Biochem 271 (6), 1198-1208 (2004)
   PUBMED   15009198
REFERENCE   2  (residues 1 to 765)
  AUTHORS   Ponting,C.P. and Aravind,L.
  TITLE     PAS: a multifunctional domain family comes to light
  JOURNAL   Curr Biol 7 (11), R674-R677 (1997)
   PUBMED   9382818
REFERENCE   3  (residues 1 to 765)
  AUTHORS   Zhulin,I.B., Taylor,B.L. and Dixon,R.
  TITLE     PAS domain S-boxes in Archaea, Bacteria and sensors for oxygen and
            redox
  JOURNAL   Trends Biochem Sci 22 (9), 331-333 (1997)
   PUBMED   9301332
REFERENCE   4  (residues 1 to 765)
  AUTHORS   Borgstahl,G.E., Williams,D.R. and Getzoff,E.D.
  TITLE     1.4 A structure of photoactive yellow protein, a cytosolic
            photoreceptor: unusual fold, active site, and chromophore
  JOURNAL   Biochemistry 34 (19), 6278-6287 (1995)
   PUBMED   7756254
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020036.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08447.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..765
                     /product="PAS domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=86866
     Region          33..118
                     /region_name="PAS_3"
                     /note="PAS fold; pfam08447"
                     /db_xref="CDD:430001"
     Site            order(33,37,43,59..62,88,93)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(56,60,68,71..72,100,102)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          114..629
                     /region_name="KinE"
                     /note="Sporulation sensor histidine kinase E [Cell cycle
                     control, cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG5809"
                     /db_xref="CDD:444511"
     Region          <380..749
                     /region_name="PRK11107"
                     /note="hybrid sensory histidine kinase BarA; Provisional"
                     /db_xref="CDD:236848"
ORIGIN      
        1 mrseftiesl emvisginag iwdwdfdtdk qiwsdrffel leyqpneftp gyenftqllv
       61 hpddkeival avkaqleqni pynvqvrlrt kysgyryfec rgnakfidgk parmvgsitd
      121 iheryslrek lsvvfehstd ahlliddsgi ldcneaavkm lrcknknell lihpakfspe
      181 vqpdgrrsde kslemdrray etgynrfewt hrrlngeefp vevtlnpvhi enkkvllvvw
      241 hdishrknae evirrneaml aesqqlthsg sweadlvtgq nywsdeafri fglepdstgp
      301 ntelfskmih pddmhlynsh ikdainnlsp asfdlrivla dgkikfihai gkpfvdqtgr
      361 vvklygaimd idaqkkneqe likakeeaem agvaksqfls tmsheirtpm navigfthll
      421 lqqdprpqqm eylnilkfsa enllvlindi ldfskieagk iefeevdfni fsllenirsg
      481 nihkanekgi llkldidkql dltvigdpvr lgqiltnlvs navkftevge vtvsasvanr
      541 dkesvtvdfe iadtgigipt ektgnifdsf tqatsdttrk yggsglglti tkrllelqns
      601 tinlrskqge gsvfyfsltf klsetqiask engsiannqs lkgmkvlive dnavniflmk
      661 nfmkqwdiey dvaengliay eivqqndydl vlmdlqmpem dgyeatakir flpdpkyatl
      721 piialtasam ldikdiafqv gmndyiskpf tpielytkia ayrkk
//
LOCUS       WP_235136400            1052 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 9 protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235136400
VERSION     WP_235136400.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012961.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00759.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..1052
                     /product="glycoside hydrolase family 9 protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=118161
     Region          291..381
                     /region_name="CelD_N"
                     /note="Cellulase N-terminal ig-like domain; pfam02927"
                     /db_xref="CDD:427058"
     Region          394..798
                     /region_name="Glyco_hydro_9"
                     /note="Glycosyl hydrolase family 9; pfam00759"
                     /db_xref="CDD:459928"
ORIGIN      
        1 mckilfflma vvatpcfsqt ktlwdgeanp ancnkaygsv isgadaydgn acfraepdqf
       61 htskigfncs nawradisgf delrfyiksn qngqttsirf ttyfaqsnwv dlvpyiqsgg
      121 gistdykevr iplnvlkkqg ydlssieyle fatttvnqlf ffvdniqvvd lqspnlavqp
      181 vsdqvlkiri serfdttgcy kvrnyglksq tdpdyqvlrn pvkvgrhhqv aallspsgap
      241 ivdyelflif nepinigsvy nltvndikdl sgnaadldtt ftfndteiyg nvkanqvgyl
      301 pagpklgklg nflgdawfmp vdtvntpvfq vrnesdqivf sgtsqflkad stfsgelvfd
      361 ldfsdfntpg tyylyvegyg rsetfviaed vydnlykqta ralyyqrtgk ldgpyaenwq
      421 rgalpattak ihashasssl nnasdfpvgt nipmtsgwld agdygryvpt aasalfilft
      481 ahelypqkfp dnyynipesg nnipdildei kyetdwlkqm qapdggvyfr vtpatwstgl
      541 peeelnalyv sekttqstal faaamamasr nfkkylpdya nnclslakka waflqqhpet
      601 spvvnvpgis agpypdpidl dnrawaaael ykttgeqpyn taflnyyaqi phqfhatmsw
      661 sqhtfkaawa yattkflvdn vpvtefkakl neevlmnynk rtmdihayhg ayhpfkgyvg
      721 ygtfgmaqsy afdyimfsfl lskpelldla kiqldiplgn nplsktmitg fgqnspnlpl
      781 hwstvkdkft tpvpgipvfg paaslvmnrp ssfaiqdsln rypygfkked pypvlrrytd
      841 areavemsef tvqeiavtia pfaffstatn dvlpvrfesf earaeqcqvd llwttseetn
      901 aayftvqrsl dgvtfedigr vtasgasrmr qqyafsdslp gphnyyrlkq vdfdgkyelt
      961 rtvhtadpcn gvkikvlqkq qnfyeihtks lekgntltge lidkrgmrrr qfdlksneit
     1021 rfdtsglped lyilqisnqs gyrlythkll vq
//
LOCUS       WP_235136366             164 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Dyadobacter fanqingshengii].
ACCESSION   WP_235136366
VERSION     WP_235136366.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 164)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..164
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=19144
     Region          5..139
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(115..118,120)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 mdkkeiylvd dsadhrylvr tifnkflpny yvrffqgghe lyqflilqss pdytgrrpgl
       61 iildlkmpai nglellkllr qtpdnadtqw ktipivilsn nssneiisrc yfagansffk
      121 kpvefeelrf mletichywl dynklpavtq kepeqksael dlde
//
LOCUS       WP_235136429             725 aa            linear   BCT 02-MAR-2025
DEFINITION  PKD domain-containing protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235136429
VERSION     WP_235136429.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040138.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18911.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..725
                     /product="PKD domain-containing protein"
                     /calculated_mol_wt=77092
     Region          <55..>261
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          122..194
                     /region_name="PKD"
                     /note="polycystic kidney disease I (PKD) domain; similar
                     to other cell-surface modules, with an IG-like fold;
                     domain probably functions as a ligand binding site in
                     protein-protein or protein-carbohydrate interactions; a
                     single instance of the repeat is...; cd00146"
                     /db_xref="CDD:238084"
     Region          124..439
                     /region_name="COG3291"
                     /note="Uncharacterized conserved protein, PKD repeat
                     domain [Function unknown]"
                     /db_xref="CDD:442520"
     Region          289..626
                     /region_name="NHL"
                     /note="NHL repeat unit of beta-propeller proteins;
                     cl18310"
                     /db_xref="CDD:302697"
     Region          293..354
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          358..413
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          425..465
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          473..546
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          552..604
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
ORIGIN      
        1 mkriliqlsf isiifgchee lppqpvakft ftnggciapc dvtftsgseh antlewdfnd
       61 gtpiekgvti thkfakgkny svkliakskd ggssgaqqmv evkpepatpp eadfkhtmsn
      121 dsiapskvtf dnqsgnatry ewdfgdpnat tdnpnkstde npshtyskpg kykvtltayn
      181 adgkvstkti eieiksvkav adftftggdc qapcevtftn kstsakthsw dfgddspksn
      241 epspkhtyak dgtytvtltv tgeggqtsvk eekvvikkgd vnavsiksef nqpsdiiada
      301 sgniyvcgqt qgetifgdgk syssgpnrkn dffiakynsa gqviwahvdg saendngram
      361 alddrgnvyl tgyvggamri nnitpqgnsd gfvakfnaag erqwftlfgg pnsddgaala
      421 ffntpegprv ylagnvtgdp rrnninffng epatsavded ivfvfldand gvirqptilr
      481 sngnqrvnal kvdadgnaym vgtfsgtlif pgadpgleai gqsdafvakw ilnpgrfqwa
      541 rragspneds gydvvidngr nvyatgtyig pltplgvgsr gdvnvflgrw nadgstnnai
      601 pwgrsgfnng nndfpgglai spggnilisg sypgtgsfpf etktfesqgs tdmivaevgv
      661 gdglatgrfq vtgggrgedt grkicvspdg hvystgyfsg aatlngtels tasampntyi
      721 vkyky
//
LOCUS       WP_235136461             150 aa            linear   BCT 02-MAR-2025
DEFINITION  PH domain-containing protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235136461
VERSION     WP_235136461.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 150)
  AUTHORS   Xu,Q., Bateman,A., Finn,R.D., Abdubek,P., Astakhova,T.,
            Axelrod,H.L., Bakolitsa,C., Carlton,D., Chen,C., Chiu,H.J.,
            Chiu,M., Clayton,T., Das,D., Deller,M.C., Duan,L., Ellrott,K.,
            Ernst,D., Farr,C.L., Feuerhelm,J., Grant,J.C., Grzechnik,A.,
            Han,G.W., Jaroszewski,L., Jin,K.K., Klock,H.E., Knuth,M.W.,
            Kozbial,P., Krishna,S.S., Kumar,A., Marciano,D., McMullan,D.,
            Miller,M.D., Morse,A.T., Nigoghossian,E., Nopakun,A., Okach,L.,
            Puckett,C., Reyes,R., Rife,C.L., Sefcovic,N., Tien,H.J.,
            Trame,C.B., van den Bedem,H., Weekes,D., Wooten,T., Hodgson,K.O.,
            Wooley,J., Elsliger,M.A., Deacon,A.M., Godzik,A., Lesley,S.A. and
            Wilson,I.A.
  TITLE     Bacterial pleckstrin homology domains: a prokaryotic origin for the
            PH domain
  JOURNAL   J Mol Biol 396 (1), 31-46 (2010)
   PUBMED   19913036
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022338.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10882.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..150
                     /product="PH domain-containing protein"
                     /calculated_mol_wt=17051
     Region          63..150
                     /region_name="bPH_4"
                     /note="Bacterial PH domain; cl19751"
                     /db_xref="CDD:388627"
ORIGIN      
        1 mnyktswdnl tkivtacvtv lyigiflqif fgeseltqgs tyviaailil sygityafrp
       61 idyrvtpdkv iirrplneiv iersniakve alqadqlrws frtfgvgglf gyfgkfynfk
      121 ignmtwyatr rnnavliktt kgkniiitpd
//
LOCUS       WP_235136470             702 aa            linear   BCT 02-MAR-2025
DEFINITION  family 10 glycosylhydrolase [Dyadobacter fanqingshengii].
ACCESSION   WP_235136470
VERSION     WP_235136470.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 702)
  AUTHORS   Naumov,D.G.
  TITLE     [GHL1-GHL15: new families of hypothetical glycoside hydrolases]
  JOURNAL   Mol Biol (Mosk) 45 (6), 1073-1083 (2011)
   PUBMED   22295578
REFERENCE   2  (residues 1 to 702)
  AUTHORS   Naumoff,D.G.
  TITLE     GH101 family of glycoside hydrolases: subfamily structure and
            evolutionary connections with other families
  JOURNAL   J Bioinform Comput Biol 8 (3), 437-451 (2010)
   PUBMED   20556855
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014675.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02638.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..702
                     /product="family 10 glycosylhydrolase"
                     /calculated_mol_wt=79988
     Region          50..178
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
     Region          395..>482
                     /region_name="GAT_1"
                     /note="Type 1 glutamine amidotransferase (GATase1)-like
                     domain; cl00020"
                     /db_xref="CDD:469582"
ORIGIN      
        1 mkkfaalfcl ifftnslcaq kttvndlwwk rnnlrviqmn lpsyeaatin adsivadlit
       61 ysantllina ggimafyptk ldfhytnpfm kenvlgdvik kchqnnikvi vrfdfsrvhe
      121 siykahpdwc yisskgerii ntdmyvvsin apyvqekafk iieevidmfp idgiflnmpg
      181 yqvnnpyegk yhgidqndfd kkafaayahg kvlpteenka dtlyqkylef kkhtvenwse
      241 rmhklvksrn eqiaictysd kfvdiirhes qsmttlpywp ytasdnvgna vnsfpdhiis
      301 nasiqqisfq srynavepqe vqirlyenia ngsgldlsmm gdmrgyeder nyevirkvya
      361 fhkkheqyfg kykslakiai vapgawpnge pmqeyrgiql mlreahipfd iiedgqignl
      421 sekvkaykli ilpeitylkp eavqvlkeas kagtnliatn rtlfdspetl qelfgakiek
      481 kdndgagnyl vpdnrsifks fpgqkmlfwk fnlglydlsg adqkllpvls kgrpgppeii
      541 ggheptgyya lgiknhaksk alifpvnlgr iyymhgyqeh knllldaihy vlpeapldiq
      601 tnapqrvevi lkefvknnvs nkekinsdgl ilhlvnltgf sgntyfeplp vynlnfkiks
      661 akkparifsl ssgqpikfty dntfinltis kldgfegvvm ey
//
LOCUS       WP_235136488             107 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5615 family PIN-like protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235136488
VERSION     WP_235136488.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 107)
  AUTHORS   Matelska,D., Steczkiewicz,K. and Ginalski,K.
  TITLE     Comprehensive classification of the PIN domain-like superfamily
  JOURNAL   Nucleic Acids Res 45 (12), 6995-7020 (2017)
   PUBMED   28575517
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037832.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18480.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..107
                     /product="DUF5615 family PIN-like protein"
                     /calculated_mol_wt=12269
     Region          1..74
                     /region_name="DUF5615"
                     /note="Domain of unknown function (DUF5615); cl41957"
                     /db_xref="CDD:477881"
ORIGIN      
        1 mkllldenlp krlkedfpdh eiftirdmgw ngvkdsqlla llqehnfhal ltfdknmryq
       61 qnfkaypvtv fvltahinsy seltklsplv kgylkksrlp lgpvais
//
LOCUS       WP_235136528             418 aa            linear   BCT 02-MAR-2025
DEFINITION  TolC family protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235136528
VERSION     WP_235136528.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 418)
  AUTHORS   Johnson,J.M. and Church,G.M.
  TITLE     Alignment and structure prediction of divergent protein families:
            periplasmic and outer membrane proteins of bacterial efflux pumps
  JOURNAL   J Mol Biol 287 (3), 695-715 (1999)
   PUBMED   10092468
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02321.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..418
                     /product="TolC family protein"
                     /GO_function="GO:0015562 - efflux transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47411
     Region          15..>151
                     /region_name="tolC"
                     /note="outer membrane channel protein; Reviewed; cl30340"
                     /db_xref="CDD:357216"
     Region          99..417
                     /region_name="TolC"
                     /note="Outer membrane protein TolC [Cell
                     wall/membrane/envelope biogenesis]; COG1538"
                     /db_xref="CDD:441147"
ORIGIN      
        1 mlgwitlpta faqdhvltin dsyvlarrny plikqfelir ktedfsvena akgylpqvsv
       61 lgqatyqsav tefklpiaip gaefpsiskd qykvyaevnq tiydggavrt qiesqkqnai
      121 veaqrvevev yklnervnql ffgvlmldeq lkqnellkkd idlgirkika fidngtafks
      181 ngntlkaell ktqqraiela snrkayldml glligqdlae stvlakpekl sltgeisrpe
      241 lrlfdyqrqn ldiqdqllkv knrpklnfff qggygrpaln ilnngfdpyy mtgvrlnwsl
      301 sglytakndr aliannresi qvqqalflyn tnlslkqqna dliklqklle sddeiialre
      361 svkttaaaql engvintndy lrevnaedqa rlnrilheiq llmsnynvrt trgqnidq
//
LOCUS       WP_235136565            1147 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4347 domain-containing protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235136565
VERSION     WP_235136565.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025611.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14252.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1147
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..1147
                     /product="DUF4347 domain-containing protein"
                     /calculated_mol_wt=123419
     Region          34..195
                     /region_name="DUF4347"
                     /note="Domain of unknown function (DUF4347); pfam14252"
                     /db_xref="CDD:433811"
     Region          340..410
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          399..463
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          454..524
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          540..636
                     /region_name="Big_5"
                     /note="Bacterial Ig-like domain; pfam13205"
                     /db_xref="CDD:463809"
     Region          545..>916
                     /region_name="AidA"
                     /note="Autotransporter adhesin AidA [Cell
                     wall/membrane/envelope biogenesis, Intracellular
                     trafficking, secretion, and vesicular transport]; COG3468"
                     /db_xref="CDD:442691"
     Region          1077..1147
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mmkttftlyl cllslltfsi vcykklrsss tgdlviides lkdyrsladg ldpksqviyv
       61 snspeglqnl tkqlasrgka ervhimthgt dgnfvlgqtq lnnanfsehe sfwqslgnvl
      121 vagrsslliy scqltasrtg eqfvqrlhsm lgvpvaasdd qtgserrggd wdleyvagki
      181 lrqhvlklmd fngllvptft qltggsspfn gmtiatddql iygdfdadgd idihsydgts
      241 aindfwqnng sgsfakvtga aspfenvfen avfyfalnaf vadwdndgdd diyvpmrnsg
      301 qneknfyyrn dngkyvllsg asspfnginv sgnnemiigd fdtdgdidih sypgsqldne
      361 fwrnngsgaf skvtgeqnpf dnlsgkaafs saryaflgdw dndgdvdilv srrgntsvrd
      421 yhrndngiyt iqtgaanpfd gmaiandnqi ifgdfdadgd idlqtsdgss tlvfwrnngs
      481 gnftqvtgae npfntlpnsg afynnalksf vadwdndgdv dvfttnytaa nqkyffrqnd
      541 appritsttp anvatgvsvs snisltfsrt vtgaagkniq irrsdnnsvf adipansaqv
      601 tgggsntiti dpptdldgat gyyitideaa fvdsegrife gvsnnatlrf ttgtppttvt
      661 sitpqddnpt nsssvayevv faqsvtgvda sdftltssdv sgaavsgvsg sgttytvtin
      721 tgsgngtirl dfsgltgtvp nvsaefttas aytiykvsna sdyyrsanvd anwntvgdwi
      781 ssadnsfwit ataipggaaa stlittgqtm rmptglsltv rnltidgtlh sgdsqfsvng
      841 scinngtltg sgtfivamft nvgvlspges pgfpaftndm ttsgtllmei ggterfmdyd
      901 ivqtfgftag gtlsvsfing ftpklgdaft lveagnitga fesvnlpdis plvwettsad
      961 gkftiravnn pmpvtlvnfn asmnesavdl vwstsseins shfeiqrske gkiweniglv
     1021 ntrnenageq hyqytdmlpl qaenfyrlrm vdadgtfafs kiehvrflds kaqlrsypnp
     1081 vtdrifldvt nvesiqsvei ysasgvlhyt ggyspegidv kalpsgifll ktiganrtts
     1141 tfkfakh
//
LOCUS       WP_235136446             282 aa            linear   BCT 02-MAR-2025
DEFINITION  TssN family type VI secretion system protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235136446
VERSION     WP_235136446.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 282)
  AUTHORS   Abby,S.S., Cury,J., Guglielmini,J., Neron,B., Touchon,M. and
            Rocha,E.P.
  TITLE     Identification of protein secretion systems in bacterial genomes
  JOURNAL   Sci Rep 6, 23080 (2016)
   PUBMED   26979785
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 282)
  AUTHORS   Coyne,M.J., Roelofs,K.G. and Comstock,L.E.
  TITLE     Type VI secretion systems of human gut Bacteroidales segregate into
            three genetic architectures, two of which are contained on mobile
            genetic elements
  JOURNAL   BMC Genomics 17, 58 (2016)
   PUBMED   26768901
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036941.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17555.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..282
                     /product="TssN family type VI secretion system protein"
                     /calculated_mol_wt=32453
     Region          44..274
                     /region_name="TssN"
                     /note="Type VI secretion system, TssN; pfam17555"
                     /db_xref="CDD:435934"
ORIGIN      
        1 melfykilpa llallsglaf tgilmyekgs amsilrwaiw liwtfllfai lgfvnsktds
       61 iitgfivlla msflmgilyl ilapmtlsww sndslldvfi aglslyfvgi agyiitynll
      121 dhenpfqyll lsgspafllp alifvsyelw mkipalrykt wtypvnepvp rlvpvetvrv
      181 mmnftpvpgk nepfegyeve ypgnttlgql fhyfisfhnk hreyrkkpiq flsdnqlple
      241 wmlfkyspqr kkiildtekt lfendvkgnd iiyaistnpi rs
//
LOCUS       WP_235136634             498 aa            linear   BCT 02-MAR-2025
DEFINITION  sialate O-acetylesterase [Dyadobacter fanqingshengii].
ACCESSION   WP_235136634
VERSION     WP_235136634.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 498)
  AUTHORS   Surolia,I., Pirnie,S.P., Chellappa,V., Taylor,K.N., Cariappa,A.,
            Moya,J., Liu,H., Bell,D.W., Driscoll,D.R., Diederichs,S.,
            Haider,K., Netravali,I., Le,S., Elia,R., Dow,E., Lee,A.,
            Freudenberg,J., De Jager,P.L., Chretien,Y., Varki,A.,
            MacDonald,M.E., Gillis,T., Behrens,T.W., Bloch,D., Collier,D.,
            Korzenik,J., Podolsky,D.K., Hafler,D., Murali,M., Sands,B.,
            Stone,J.H., Gregersen,P.K. and Pillai,S.
  TITLE     Functionally defective germline variants of sialic acid
            acetylesterase in autoimmunity
  JOURNAL   Nature 466 (7303), 243-247 (2010)
   PUBMED   20555325
REFERENCE   2  (residues 1 to 498)
  AUTHORS   Bitto,E., Bingman,C.A., McCoy,J.G., Allard,S.T., Wesenberg,G.E. and
            Phillips,G.N. Jr.
  TITLE     The structure at 1.6 Angstroms resolution of the protein product of
            the At4g34215 gene from Arabidopsis thaliana
  JOURNAL   Acta Crystallogr D Biol Crystallogr 61 (Pt 12), 1655-1661 (2005)
   PUBMED   16301800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015585.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03629.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..498
                     /product="sialate O-acetylesterase"
                     /calculated_mol_wt=55286
     Region          28..99
                     /region_name="Ca_tandemer"
                     /note="Ca2+-stabilized adhesin repeat; NF033510"
                     /db_xref="CDD:411149"
     Region          110..391
                     /region_name="SASA"
                     /note="Carbohydrate esterase, sialic acid-specific
                     acetylesterase; pfam03629"
                     /db_xref="CDD:427409"
ORIGIN      
        1 mmvrmlflll lnvlaldfsk aqyaldstlt lapifsdhmv lqrskpiriy gkaasgsnvn
       61 vqflnkaltt kadqsgkwnv vfpaskeggp yaisvsandq kitvsdvlig dvwlcsgqsn
      121 mefalqdaqt gpeelraekf dskmrllkme givstgdvaw dsaslskvnr yeyfsgswqt
      181 lnkasaasfs avayyfgkki kqeanvpigl iqvavggspt eswiehslle qnqqfagmlg
      241 dwphstlvmd wcreraakni snaqsadqkh pyqpgynfqs giapltdfpi tgviwyqges
      301 nvfnvplhaq lfemlvkswr qkwghafpfy yvqlsgiera nwpefrdsqr lmlakipnsg
      361 mavsydlgds lnvhpirkke vgerlallal rntykknvva ngpvparaml kdgviriqfa
      421 eneklstpgn kpligfemit qdgkrmpana siqgnevvld ipkdslitti myayqpftra
      481 nlynetglpa ptfsmkvk
//
LOCUS       WP_235136636             313 aa            linear   BCT 02-MAR-2025
DEFINITION  dihydrodipicolinate synthase family protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235136636
VERSION     WP_235136636.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 313)
  AUTHORS   Mirwaldt,C., Korndorfer,I. and Huber,R.
  TITLE     The crystal structure of dihydrodipicolinate synthase from
            Escherichia coli at 2.5 A resolution
  JOURNAL   J Mol Biol 246 (1), 227-239 (1995)
   PUBMED   7853400
REFERENCE   2  (residues 1 to 313)
  AUTHORS   Izard,T., Lawrence,M.C., Malby,R.L., Lilley,G.G. and Colman,P.M.
  TITLE     The three-dimensional structure of N-acetylneuraminate lyase from
            Escherichia coli
  JOURNAL   Structure 2 (5), 361-369 (1994)
   PUBMED   8081752
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012904.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00701.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..313
                     /product="dihydrodipicolinate synthase family protein"
                     /GO_function="GO:0016829 - lyase activity [Evidence IEA]"
                     /calculated_mol_wt=34076
     Region          5..286
                     /region_name="TIM-like beta/alpha barrel domains"
                     /note="A large family of domains similar to triose
                     phosphate isomerase (TIM) which, in general, share an
                     eight beta/alpha closed barrel structure; cl21457"
                     /db_xref="CDD:473867"
     Site            170
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:188641"
ORIGIN      
        1 mnlhlkglia apftpmqadg slnldlipdy yqflkqngvn gaficgstge gvsltisekk
       61 qvaeawasca sddqsftimp llggtciadc ielakhaqqi gldavsftsp fyfkpanvem
      121 laeciiaiae tvpempfyyy hipvltgvgl pmfdllkvld grlpnfagik ythedfmdfq
      181 sclnfqngky dmlwgrdenm lsalavgakg avgstfnyaa plyhelieaf eqndmekaga
      241 lqqksidmir llgkyggisv gkaymkvvgl dcgtfrlpvk nmsdaqfqsf qsdvavldfd
      301 sfksglptak tth
//
LOCUS       WP_235136666             395 aa            linear   BCT 02-MAR-2025
DEFINITION  PKD domain-containing protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235136666
VERSION     WP_235136666.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040138.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18911.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..395
                     /product="PKD domain-containing protein"
                     /calculated_mol_wt=42168
     Region          36..112
                     /region_name="PKD"
                     /note="Repeats in polycystic kidney disease 1 (PKD1) and
                     other proteins; smart00089"
                     /db_xref="CDD:214510"
     Region          124..199
                     /region_name="PKD"
                     /note="Repeats in polycystic kidney disease 1 (PKD1) and
                     other proteins; smart00089"
                     /db_xref="CDD:214510"
     Region          137..>326
                     /region_name="COG3291"
                     /note="Uncharacterized conserved protein, PKD repeat
                     domain [Function unknown]"
                     /db_xref="CDD:442520"
ORIGIN      
        1 mkkklpyllt rilfaaflvv gcddeeakpl elgppvayfs yepnvnltap vtidftngsl
       61 nadeyvwtfd gtgrslkskd ivldfnlagt yvitleaige ggtdvyskti vvsesgsnnk
      121 pepvadftya pnqnlvapav vaftntslns ssyqwdfgdg ttstltnptk qftnegvypv
      181 kltatgngss gtasksivvg kpvtatgqvv fwtdkssgwn sidvivsgtp agtingyfas
      241 epscgsnvti trapgtyayt aqsntgvkws gnitvtsnqc gkfrlkfpat dntscdlnqw
      301 tqflketkyt fdpnggctng ksyvsirnvs nvnfgikicl qspngkwtcg leniapgkea
      361 snwtcgrala ykvwgipssk talygdgscr fpifp
//
LOCUS       WP_235136680             185 aa            linear   BCT 02-MAR-2025
DEFINITION  antirestriction protein ArdA [Dyadobacter fanqingshengii].
ACCESSION   WP_235136680
VERSION     WP_235136680.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 185)
  AUTHORS   Nekrasov,S.V., Agafonova,O.V., Belogurova,N.G., Delver,E.P. and
            Belogurov,A.A.
  TITLE     Plasmid-encoded antirestriction protein ArdA can discriminate
            between type I methyltransferase and complete
            restriction-modification system
  JOURNAL   J Mol Biol 365 (2), 284-297 (2007)
   PUBMED   17069852
REFERENCE   2  (residues 1 to 185)
  AUTHORS   Thomas,A.T., Brammar,W.J. and Wilkins,B.M.
  TITLE     Plasmid R16 ArdA protein preferentially targets restriction
            activity of the type I restriction-modification system EcoKI
  JOURNAL   J Bacteriol 185 (6), 2022-2025 (2003)
   PUBMED   12618468
REFERENCE   3  (residues 1 to 185)
  AUTHORS   Belogurov,A.A., Delver,E.P. and Rodzevich,O.V.
  TITLE     IncN plasmid pKM101 and IncI1 plasmid ColIb-P9 encode homologous
            antirestriction proteins in their leading regions
  JOURNAL   J Bacteriol 174 (15), 5079-5085 (1992)
   PUBMED   1321121
REFERENCE   4  (residues 1 to 185)
  AUTHORS   Delver,E.P., Kotova,V.U., Zavilgelsky,G.B. and Belogurov,A.A.
  TITLE     Nucleotide sequence of the gene (ard) encoding the antirestriction
            protein of plasmid colIb-P9
  JOURNAL   J Bacteriol 173 (18), 5887-5892 (1991)
   PUBMED   1653225
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018926.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07275.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..185
                     /product="antirestriction protein ArdA"
                     /calculated_mol_wt=21776
     Region          1..182
                     /region_name="ArdA"
                     /note="Antirestriction protein ArdA [Defense mechanisms];
                     COG4734"
                     /db_xref="CDD:443768"
ORIGIN      
        1 mkslenapri yvgtygmyns gslfgkwfdl tdyadakefy qdcyeyhrne fdpelmfqdw
       61 enipdflmse cslddkafey fqaldemddy taeafklyse qisnwpsngk slheqvesfq
      121 esyrgyfggt mkdakieyay qyvdetgmla dapsvleryf dyeaftrdlf legytevdgy
      181 vfddn
//
LOCUS       WP_235136706             119 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase large subunit domain-containing protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235136706
VERSION     WP_235136706.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 119)
  AUTHORS   Baumann,R.G. and Black,L.W.
  TITLE     Isolation and characterization of T4 bacteriophage gp17 terminase,
            a large subunit multimer with enhanced ATPase activity
  JOURNAL   J Biol Chem 278 (7), 4618-4627 (2003)
   PUBMED   12466275
REFERENCE   2  (residues 1 to 119)
  AUTHORS   Lang,A.S., Taylor,T.A. and Beatty,J.T.
  TITLE     Evolutionary implications of phylogenetic analyses of the gene
            transfer agent (GTA) of Rhodobacter capsulatus
  JOURNAL   J Mol Evol 55 (5), 534-543 (2002)
   PUBMED   12399927
REFERENCE   3  (residues 1 to 119)
  AUTHORS   Mitchell,M.S., Matsuzaki,S., Imai,S. and Rao,V.B.
  TITLE     Sequence analysis of bacteriophage T4 DNA packaging/terminase genes
            16 and 17 reveals a common ATPase center in the large subunit of
            viral terminases
  JOURNAL   Nucleic Acids Res 30 (18), 4009-4021 (2002)
   PUBMED   12235385
REFERENCE   4  (residues 1 to 119)
  AUTHORS   Lang,A.S. and Beatty,J.T.
  TITLE     The gene transfer agent of Rhodobacter capsulatus and 'constitutive
            transduction' in prokaryotes
  JOURNAL   Arch Microbiol 175 (4), 241-249 (2001)
   PUBMED   11382219
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015211.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03237.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..119
                     /product="terminase large subunit domain-containing
                     protein"
                     /calculated_mol_wt=13522
     Region          <27..105
                     /region_name="Terminase_6N"
                     /note="Terminase large subunit, T4likevirus-type,
                     N-terminal; pfam03237"
                     /db_xref="CDD:427210"
ORIGIN      
        1 mktekarqaw rkiiarmryn vpglknqidv tttpegfkfv yeqfvkqird npslgemygh
       61 iqastyenel nlpadyipsl lasyppqlin aylrgqfvnl avavfmrist glritatrp
//
LOCUS       WP_235136710             227 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4055 domain-containing protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235136710
VERSION     WP_235136710.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024661.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13264.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..227
                     /product="DUF4055 domain-containing protein"
                     /calculated_mol_wt=25083
     Region          126..>226
                     /region_name="DUF4055"
                     /note="Domain of unknown function (DUF4055); pfam13264"
                     /db_xref="CDD:433070"
ORIGIN      
        1 mvdipraset ltvaqanaqq irpylhfykt eailnwelar vnnayrlinl vlseffknke
       61 gkqeqqirql tlegvvykqi vwrkgnaadw sihetiipmk sgqsfgeipf ypvscrrptm
      121 niiappiesl vdvnishymn sadlengahv sgsptpyitg iddtnvtlal gtgtawllpn
      181 aeskvgfahv gedgfstlek lldrkekqma slgarmlape kngaeav
//
LOCUS       WP_235136789             664 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235136789
VERSION     WP_235136789.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 664)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..664
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=75901
     Region          19..318
                     /region_name="WcaG"
                     /note="Nucleoside-diphosphate-sugar epimerase [Cell
                     wall/membrane/envelope biogenesis]; COG0451"
                     /db_xref="CDD:440220"
     Region          344..523
                     /region_name="DPM1_like_bac"
                     /note="Bacterial DPM1_like enzymes are related to
                     eukaryotic DPM1; cd04187"
                     /db_xref="CDD:133030"
     Site            order(346,348,432)
                     /site_type="active"
                     /note="Ligand binding site [active]"
                     /db_xref="CDD:133030"
     Site            order(379,431..432)
                     /site_type="active"
                     /note="Putative Catalytic site [active]"
                     /db_xref="CDD:133030"
     Site            430..432
                     /site_type="active"
                     /note="DXD motif [active]"
                     /db_xref="CDD:133030"
ORIGIN      
        1 mldqlpvfrd kieslkgpvf vfgasgfiga nlfneifkir kdcyalthda tkawrlklln
       61 ipfenivhcd ilsnnsvqev fekykpqtif nlaaygaysk qnnvnltyet nvigtvnilq
      121 ncttemvyih agssseygfn ctspketdrv epnshyavsk vsaaylleyy akvfnlktln
      181 lrlysiygyw eepdrlipkl ienarkkqlp slvspdisrd fvfiedcvea fldaalkigt
      241 etsgksynia tgrkttmgdl vntskrtfni tqepqwgsms nrkwdlaewf gdpsafetdf
      301 gwkartplet glskysewqa qikyedrvip afenpklnpv itaiiacykd aqaipfmyer
      361 ivktcndlkv ryeiifvndn spdnqeevis kicdkdpnvv gishsrnfgs qsaflsgmei
      421 atgdcvvlmd gdlqdppeii pafyekwmeg fdvvygvrvq remkphihff yksfykvfqg
      481 lsyisiprda gdfsmidrkv vkelvdlpet eqflrglraw vgfkqtgvpy vrpermfgvs
      541 tnnwtkniww akkaifsfsf aplelmsyag faltgfsilg iiwqilakfv ffrdtpqgis
      601 tvivlvvffg gltilgisfl geyiakifee tkkrpkyirt rirrgsksyk tadeirtlvk
      661 qlrk
//
LOCUS       WP_235136774             212 aa            linear   BCT 02-MAR-2025
DEFINITION  SatD family protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235136774
VERSION     WP_235136774.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 212)
  AUTHORS   Kremer,B.H., van der Kraan,M., Crowley,P.J., Hamilton,I.R.,
            Brady,L.J. and Bleiweis,A.S.
  TITLE     Characterization of the sat operon in Streptococcus mutans:
            evidence for a role of Ffh in acid tolerance
  JOURNAL   J Bacteriol 183 (8), 2543-2552 (2001)
   PUBMED   11274114
REFERENCE   2  (residues 1 to 212)
  AUTHORS   Gutierrez,J.A., Crowley,P.J., Cvitkovitch,D.G., Brady,L.J.,
            Hamilton,I.R., Hillman,J.D. and Bleiweis,A.S.
  TITLE     Streptococcus mutans ffh, a gene encoding a homologue of the 54 kDa
            subunit of the signal recognition particle, is involved in
            resistance to acid stress
  JOURNAL   Microbiology (Reading) 145 (Pt 2), 357-366 (1999)
   PUBMED   10075418
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16264.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..212
                     /product="SatD family protein"
                     /calculated_mol_wt=23592
     Region          4..188
                     /region_name="SatD"
                     /note="SatD family (SatD); pfam16264"
                     /db_xref="CDD:435244"
ORIGIN      
        1 mkkyyavita dmvnstlftr ekttewlsem idllrensaf dwalkpeiyr gdsfqgvlkn
       61 sneamhaail arasmrthar ntdlrvaigi gkteqltdra gtsdgeafrl sghladnirk
      121 qkarigials tpseplnatl dlletlienw ttsqseviva lllkkninqi seqlgisqpa
      181 asqrvasskw waienflatf pkhlslytkt kl
//
LOCUS       WP_235136796             577 aa            linear   BCT 02-MAR-2025
DEFINITION  M14 family metallopeptidase [Dyadobacter fanqingshengii].
ACCESSION   WP_235136796
VERSION     WP_235136796.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 577)
  AUTHORS   Makarova,K.S. and Grishin,N.V.
  TITLE     The Zn-peptidase superfamily: functional convergence after
            evolutionary divergence
  JOURNAL   J Mol Biol 292 (1), 11-17 (1999)
   PUBMED   10493853
REFERENCE   2  (residues 1 to 577)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10154684
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..577
                     /product="M14 family metallopeptidase"
                     /EC_number="3.4.17.-"
                     /GO_function="GO:0004181 - metallocarboxypeptidase
                     activity [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=67105
     Region          88..302
                     /region_name="M14-like"
                     /note="Peptidase M14-like domain; uncharacterized
                     subgroup; cd06241"
                     /db_xref="CDD:349460"
     Site            order(98,101,161,170..171,200..201,206,288)
                     /site_type="active"
                     /db_xref="CDD:349460"
ORIGIN      
        1 mrllffllll fsltfsvkaq yktrfeisgg ketptyeegi eyykllaknf peiqitekgl
       61 tdsgkplhlv lysksktfei qklksqhkai llvnnaihpg esdgvdasmm llrdiamnpq
      121 kfpeldnvil aiipfynigg alnrnsttrt nqagpeeygf rgnarnydln rdfiksdtrn
      181 arsfaaifhe ldpdlfadth vsngadyqyv mtldyaqkdk lggklgyfnd kvflpymykh
      241 lkaagfeatp yvnswgqtpd kgfvqfpdwp rystgyaalf htigvmteth mlkpydkrva
      301 styayllgni kflsrnrrel lklrkdtkea vktqekfavt wevnkvkntq iefkgyepey
      361 itskvsgaqr lyynrskpft kkipfydtys pvdevtrpva yiipqgwhnv idlmklngve
      421 vkqlekdtdm evetyyienl etpkqpfegh ywhtsvttkt vkqqitfkkg dwyipvnqwt
      481 nryivetlep kgvdsffkwn ffdtilqske hysayvfedl aaellakdvs lrikledkrk
      541 ndpefakngs aqldfiydns pyrekeymry pvfrlmk
//
LOCUS       WP_235136819             262 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4905 domain-containing protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235136819
VERSION     WP_235136819.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027573.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16248.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..262
                     /product="DUF4905 domain-containing protein"
                     /calculated_mol_wt=30473
     Region          21..102
                     /region_name="DUF4905"
                     /note="Domain of unknown function (DUF4905); pfam16248"
                     /db_xref="CDD:435235"
ORIGIN      
        1 mqkvfsqkfs qniwrilpnp dlqsdlwiie lrdseskqvs fammdtaqmk qlwhysppea
       61 dwwssltafs hnniflhnyr ypevpeptdl lafsaingqf lwalpghlmv ksldnryiev
      121 agksgeqfiy kacdaetgal splkesyade fekvilqepv ryrkdsvyfe klaifiqnit
      181 nghtavsidy lekrpyimfs yyiyeqdksv qyllivtdqk qlvlheqlse eregmgrstm
      241 mlkastlvyl knnnefsslt ls
//
LOCUS       WP_235136821             378 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleotidyltransferase family protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235136821
VERSION     WP_235136821.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026257.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14907.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..378
                     /product="nucleotidyltransferase family protein"
                     /calculated_mol_wt=43519
     Region          39..294
                     /region_name="NT_Pol-beta-like"
                     /note="Nucleotidyltransferase (NT) domain of DNA
                     polymerase beta and similar proteins; cl11966"
                     /db_xref="CDD:472251"
ORIGIN      
        1 mpdlkvspel amlieaalgg kskspsalnq keinsarttr lanwhqvrpl lldylqnseg
       61 qieisakhla glkefamgqa vtnmaflgis vklykqlidd nvkaflmkga lwawllyekp
      121 nqrefgdidf fvaqsdidks litlkrngfv pdayrnylfd kdalrssyld tdyqlplepi
      181 sdhtlqslei qwrpsypryc ydltweelsq nmisvsmags svqipgmenq llmmvihhgg
      241 veqwdklkym adfvrllrkh sntmdwahiq dvstrkgfnr llneslgmvr lltgegfasn
      301 dssnastlps dnfsnailqh wenerpalks kswriflynm rhrdslavkf sillahlryl
      361 tnfrllwhka lwyknhrs
//
LOCUS       WP_235136588             656 aa            linear   BCT 02-MAR-2025
DEFINITION  YjbH domain-containing protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235136588
VERSION     WP_235136588.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 656)
  AUTHORS   Sathiyamoorthy,K., Mills,E., Franzmann,T.M., Rosenshine,I. and
            Saper,M.A.
  TITLE     The crystal structure of Escherichia coli group 4 capsule protein
            GfcC reveals a domain organization resembling that of Wza
  JOURNAL   Biochemistry 50 (24), 5465-5476 (2011)
   PUBMED   21449614
REFERENCE   2  (residues 1 to 656)
  AUTHORS   Ferrieres,L., Aslam,S.N., Cooper,R.M. and Clarke,D.J.
  TITLE     The yjbEFGH locus in Escherichia coli K-12 is an operon encoding
            proteins involved in exopolysaccharide production
  JOURNAL   Microbiology (Reading) 153 (Pt 4), 1070-1080 (2007)
   PUBMED   17379715
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017857.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06082.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..656
                     /product="YjbH domain-containing protein"
                     /calculated_mol_wt=74473
     Region          44..596
                     /region_name="YjbH"
                     /note="Exopolysaccharide biosynthesis protein YbjH;
                     pfam06082"
                     /db_xref="CDD:428757"
ORIGIN      
        1 mkavtikvee ikhrffglli rvgilstlil vicskviaqs nisgkpgliy iptaryvpdg
       61 nmeiglhffp gnygfnsdnq npgrvlslnl tvlprfdini nvlqlfstaa npvklglgdr
      121 qldfryllmk esksrpslaf itstptsisp tllthalvat khfnvakewe aevtagygsp
      181 yhvyrkgstl dnyglfanma fekkedyayh krylegpfgg vsftfrskvg lmleydsqni
      241 nagvyvralk nwviqaavln geqitfgsay nfsllkqsrr mlslgkkqsq dnvqtpgkse
      301 tdiidpgyrk lrgnfenvgt dsagiityeq rlnrnpfpal yqlkklfads pntsfvplfq
      361 gipigqyklg dklefsqvsd emrerlkqkn rfplhrngys ldfwiqpyfn anfgnydkpi
      421 qsntsvalqs qifllpgmsl dfgilfpivn dldnrpkkir papvflnqfy sknhnhisas
      481 agffqndqyg vniqyrranl krpwsfgvea gltgdyyypn kgiyygnmek lllvldaayl
      541 lsnpditfkv sggrylagdt gvrldmlrqf snieigfyam ttsngstigf nfaiplfpgk
      601 llngkhvrlr tasefpweyn ytrgyriger yrtgyqldqk lrqyhsqyln rqyqak
//
LOCUS       WP_235136936              80 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma factor [Dyadobacter fanqingshengii].
ACCESSION   WP_235136936
VERSION     WP_235136936.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 80)
  AUTHORS   Campbell,E.A., Muzzin,O., Chlenov,M., Sun,J.L., Olson,C.A.,
            Weinman,O., Trester-Zedlitz,M.L. and Darst,S.A.
  TITLE     Structure of the bacterial RNA polymerase promoter specificity
            sigma subunit
  JOURNAL   Mol Cell 9 (3), 527-539 (2002)
   PUBMED   11931761
REFERENCE   2  (residues 1 to 80)
  AUTHORS   Malhotra,A., Severinova,E. and Darst,S.A.
  TITLE     Crystal structure of a sigma 70 subunit fragment from E. coli RNA
            polymerase
  JOURNAL   Cell 87 (1), 127-136 (1996)
   PUBMED   8858155
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04542.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..80
                     /product="sigma factor"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=8818
     Region          10..>61
                     /region_name="PRK09641"
                     /note="RNA polymerase sigma factor SigW; Provisional"
                     /db_xref="CDD:182012"
ORIGIN      
        1 mknpggqihi dnvkkgdlgp ftflvekykn laytiaikil gnaedaedaa qesfvkaylq
       61 inallfdyfl rlktgrlaks
//
LOCUS       WP_235136964             331 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase [Dyadobacter fanqingshengii].
ACCESSION   WP_235136964
VERSION     WP_235136964.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 331)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 331)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..331
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=36810
     Region          3..320
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     Site            order(19..21,52,57,83,140,170..171,190,218..224,275,
                     292..295,300,303..304)
                     /site_type="active"
                     /db_xref="CDD:381296"
     Site            order(52,57,83,140)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381296"
ORIGIN      
        1 mqyrklgnsd levsvitfga waaggwmwgg terteavkai qasynagvts idtapvygqg
       61 lseeivgeai kdlprdkvqi ltkygmrwdl tqgdfamhsk nnagedidiy kyaakdsiik
      121 ecedslkrlg tdyidlyqih whdkttpiee tmeavtelik qgkvrhagvc nydvalmrea
      181 aqyidlvsdq vpysmvkrei epelvpycie nnksivaysp lerglltgkm kpghqfaadd
      241 hrasiyfykd enlervnafl dkikpiadsk natigqlvlr wtveqpgvsi alvgardatq
      301 alqnaaamdi tispeeikti tgeldklelv k
//
LOCUS       WP_235137067             357 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235137067
VERSION     WP_235137067.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..357
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /calculated_mol_wt=39718
     Region          6..351
                     /region_name="PucG"
                     /note="Archaeal aspartate aminotransferase or a related
                     aminotransferase, includes purine catabolism protein PucG
                     [Amino acid transport and metabolism, Nucleotide transport
                     and metabolism]; COG0075"
                     /db_xref="CDD:439845"
ORIGIN      
        1 msltyftpgp aqlyptfeqh lqsfvsgqlg sishrsqqyr dlhkftvdql rillnvpdth
       61 aimflgsase awerilfscv elesfhlvng sfskkfceys talnkyahky ekpmgegfta
      121 deievpeyae licvthnets sgvqmpvsei hklkqknpdk fiavdmvssa pypnldynli
      181 dtaffsvqka fglpaglgvw ivsekcleka kqiksqysig ahndlptlwk nalnnetpat
      241 pnvmgiyllg kiaedfnkig vveirkateq kaaliydfie ktngfssfvk eienrsqtvv
      301 vanveapagd iikkikekgm vigsgygefk ssqlrianfp atsydaverl vyelgna
//
LOCUS       WP_235137041             413 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Dyadobacter fanqingshengii].
ACCESSION   WP_235137041
VERSION     WP_235137041.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..413
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44614
     Region          19..398
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(29..30,33..34,37,73,123..124,126..128,131,151,
                     154..155,158,231,234..235,238..240,243,271,275,326..327,
                     331,335,351,354..355,358..359,362)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340874"
ORIGIN      
        1 matitaersd vshlfsapvi vaalgyfvdi ydlllfgivr lpslaslgls eteisltgas
       61 ilnwqmtgll lggilwgvlg dkkgrlsvlf gsiityslan iacgfvqdpt tykllrfiag
      121 iglagelgag itlvseilpk hlraigtslv agigllgavv ayftveyfdw ryayfigggl
      181 gisllllrig vfesgifkdi knqkhvekgn ffalftnrdr lvrylkcigi glptwfvigi
      241 latfsnefgk alglsevvkp glsimwcyvg lsmgdlcsgf lshwlesrkk avfylmiftl
      301 iwsvvylyag iksvstfygv aallgfgigy wamfvtigae qfgtnlrata attvpnmvrg
      361 tvvlmttlfa tfknsfsvin sgamvgvicf aiglfcilti pethgrdldf lee
//
LOCUS       WP_235137096             346 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Dyadobacter fanqingshengii].
ACCESSION   WP_235137096
VERSION     WP_235137096.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024698.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13302.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..346
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=38934
     Region          5..162
                     /region_name="RimL"
                     /note="Protein N-acetyltransferase, RimJ/RimL family
                     [Translation, ribosomal structure and biogenesis,
                     Posttranslational modification, protein turnover,
                     chaperones]; COG1670"
                     /db_xref="CDD:441276"
     Region          196..346
                     /region_name="SRPBCC_1"
                     /note="Ligand-binding SRPBCC domain of an uncharacterized
                     subfamily of proteins; cd07818"
                     /db_xref="CDD:176860"
     Site            order(199,201,203,212..214,216..217,228,242,244,246,248,
                     250,263,265,274,276,290..291,293,295,304,306,308,310,
                     325..329,331..333,335..337,340)
                     /site_type="other"
                     /note="putative hydrophobic ligand binding site [chemical
                     binding]"
                     /db_xref="CDD:176860"
ORIGIN      
        1 mkvktisten fvltkmtaad gdkyfrlsnn dnvmkyvtgh aldrqesdkm lrtflaeygn
       61 dtylgrylie grysgeligt akldmdgsev eigyrileeh wgkgiateia rgligfakqt
      121 llakqviayv nvgnaasirv lekagmvnie riedldeiky kfiyspqnsp lmkkvlyiil
      181 giiavvliaa fimpkdyave reviinrpks qvfeyikslk nqdnwsvwmg kdpnikknyt
      241 gtdgtvgfts mwegnkevgk geqeitkite gervdtqlrf iepfessnda ymiteevdps
      301 atkvkwgfsg smpipmnvml pfmgmeesvg kdfqdglnnl kgilek
//
LOCUS       WP_235137121             349 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235137121
VERSION     WP_235137121.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 349)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..349
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /calculated_mol_wt=39130
     Region          1..>289
                     /region_name="GumC"
                     /note="Exopolysaccharide export protein/domain GumC/Wzc1
                     [Cell wall/membrane/envelope biogenesis]; COG3206"
                     /db_xref="CDD:442439"
ORIGIN      
        1 maeiqsdknt dtleisffev lgffkkyllv liaaavlsai igvafsflla krytaqtill
       61 pelgssrnss ffsmalgggs dpsgklvpel ypnilstipf gqyllkipvv dennvsypsl
      121 esymnrdssq sflsslmsfg rtpkedtkak spnpnikila ftskqermvn aaknlvqatv
      181 gttdgiitie semtdpvvaa mvvdasekyl idyvsdytis kttqqvdflq krvqearkrq
      241 qsaeyalqay rdthrntfln varieeqrlq aeyvlsqaiy sdlstkmeqf kirekeekpv
      301 fkvlepvrvp laksspkrlf igiifsvlgv fstltyiiff keklhkqlv
//
LOCUS       WP_235137185             415 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6786 family protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235137185
VERSION     WP_235137185.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042839.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20583.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..415
                     /product="DUF6786 family protein"
                     /calculated_mol_wt=45500
     Region          40..414
                     /region_name="DUF6786"
                     /note="Family of unknown function (DUF6786); pfam20583"
                     /db_xref="CDD:466732"
ORIGIN      
        1 mqkhlsvsll ilavfalnac rsnnqsdqkt leqtnheakg tfgydvaflk khnsalilqa
       61 pdnadaqaii ipeyqgrvmt stangsegns ygwinyklie sgvnqphina fggeerfwls
      121 peggqfsvyf kkgqtfdfan wqtpaiidtv iyeavetdss svsfradati enysgtvfvi
      181 einrkismld kaaiiselni aslegcksva yesvnaltnk gtdwkaetgm lgiwllgmfk
      241 ptektvivap fsthlskkpl ltddyfgeip adriavkgsa vylkadgkfr skigiapksa
      301 rnvagsydae kgiltiiqyd lkakekylks tweihkdpyd gdalnayndg kladgtqmgp
      361 fyelesnspa kalkngemlt hrqrtyhfeg sketlgaisq kvlgvgledi asafh
//
LOCUS       WP_235137237             500 aa            linear   BCT 02-MAR-2025
DEFINITION  RagB/SusD family nutrient uptake outer membrane protein
            [Dyadobacter fanqingshengii].
ACCESSION   WP_235137237
VERSION     WP_235137237.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 500)
  AUTHORS   Goulas,T., Garcia-Ferrer,I., Hutcherson,J.A., Potempa,B.A.,
            Potempa,J., Scott,D.A. and Gomis-Ruth,F.X.
  TITLE     Structure of RagB, a major immunodominant outer-membrane surface
            receptor antigen of Porphyromonas gingivalis
  JOURNAL   Mol Oral Microbiol 31 (6), 472-485 (2016)
   PUBMED   26441291
REFERENCE   2  (residues 1 to 500)
  AUTHORS   Bolam,D.N. and Koropatkin,N.M.
  TITLE     Glycan recognition by the Bacteroidetes Sus-like systems
  JOURNAL   Curr Opin Struct Biol 22 (5), 563-569 (2012)
   PUBMED   22819666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07980.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..500
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /calculated_mol_wt=55414
     Region          66..459
                     /region_name="SusD"
                     /note="starch binding outer membrane protein SusD;
                     cl21747"
                     /db_xref="CDD:451378"
ORIGIN      
        1 mksklinkfs iltvfsllvl sgcsdfldre plgryvekdi pagsfdsqvf gvyakmrsfg
       61 vssmpylaih nfrsddadkg ssttdgvaqe sfydnfqytq dewllnsyws dhyaliiaan
      121 aviadidsvg atdagtlvnk aeakfmraya yfnlartygd ipkidfkvie ssqanipksp
      181 vgeifalidt dlteasallp vswdskyigr ltsgaayalh akthlwrknw paalaaakqv
      241 issakyslvs dyagifretg ennsesvfel qafysitqts lgienamhqg vrgsgawdlg
      301 wgwntpnksl adafekgdpr kdatllysgq vntpynenvp pastsipray wnkkaytnpa
      361 treatasrfg qwmnvriiry advllmaaea aneaggeqni tdalawlemv rgrargtnaa
      421 vlpkivtrnq aqlreairke rrvelgmene rffdivrwgi aadvlraagk nlyqnrnryl
      481 piprpeidks ggvlvqnpey
//
LOCUS       WP_235137303             327 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleoside hydrolase [Dyadobacter fanqingshengii].
ACCESSION   WP_235137303
VERSION     WP_235137303.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 327)
  AUTHORS   Degano,M., Gopaul,D.N., Scapin,G., Schramm,V.L. and
            Sacchettini,J.C.
  TITLE     Three-dimensional structure of the inosine-uridine nucleoside
            N-ribohydrolase from Crithidia fasciculata
  JOURNAL   Biochemistry 35 (19), 5971-5981 (1996)
   PUBMED   8634238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01156.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..327
                     /product="nucleoside hydrolase"
                     /GO_function="GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA]"
                     /calculated_mol_wt=35756
     Region          28..305
                     /region_name="nuc_hydro_2"
                     /note="NH_2: A subgroup of nucleoside hydrolases. This
                     group contains eukaryotic and bacterial proteins similar
                     to nucleoside hydrolases. Nucleoside hydrolases cleave the
                     N-glycosidic bond in nucleosides generating ribose and the
                     respective base. These enzymes...; cd02652"
                     /db_xref="CDD:239118"
     Site            order(33,39..40,67,147,192,194,262)
                     /site_type="active"
                     /db_xref="CDD:239118"
ORIGIN      
        1 mrkillivcl ltcshvysqt gsrlpktlil dtdigpdydd vgamavmhal adkgevrpla
       61 viasnknelv vptidilnty fgrpelptga pkgvaapsyg atqkwpemli ekyphkikks
      121 aeaddavtvy rkilakqpdq svtivtvgfl tnlanlldsk pdehsqlsgl nlvrkkvsgl
      181 vsmagrfpag reynvyvdsl asqkvftewp teiifsgfei gqeirtgvnv ignerlkspv
      241 kdayqmamsk sqgdangrqs wdqtavlvgv rgvqpyfglk rgkiiikdgn ntwqddamgp
      301 hayltpnmpt pqltaliegl mmwegkk
//
LOCUS       WP_235137325            1280 aa            linear   BCT 02-MAR-2025
DEFINITION  hydantoinase B/oxoprolinase family protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235137325
VERSION     WP_235137325.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 1280)
  AUTHORS   Watabe,K., Ishikawa,T., Mukohara,Y. and Nakamura,H.
  TITLE     Cloning and sequencing of the genes involved in the conversion of
            5-substituted hydantoins to the corresponding L-amino acids from
            the native plasmid of Pseudomonas sp. strain NS671
  JOURNAL   J Bacteriol 174 (3), 962-969 (1992)
   PUBMED   1732229
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014585.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02538.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1280
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..1280
                     /product="hydantoinase B/oxoprolinase family protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=138546
     Region          13..1280
                     /region_name="PLN02666"
                     /note="5-oxoprolinase"
                     /db_xref="CDD:215358"
ORIGIN      
        1 mgkinalfwk lwvdtggtft dclavdpegn ktrlkvlssg cvrgriigki dektfqfaas
       61 wsfdaglleg ytlrllengl iskvisvdss nqtfkleddl pfsqntdfei fsgdeapvla
      121 arlltktrls etlpalemrl gttkgtnall erkgaktllv vtkgfkdlly ignqqrpslf
      181 qldipeprvl ysevlevdar ldasgnviqd ltadilatls pakninsiav sllhsyqnna
      241 hellvekafr engakyisvs sklfpfshyl rrtqtavvna yldpvldqyl sniknqlggs
      301 plggnqlggs plgecslkvm tstgslsevn gflakdslls gpaggmvaaa nagkrlgfpk
      361 titfdmggts tdtaliagrp elkyiteidg iefhnptlai etvaagggsi cwfdgfslqv
      421 gpesagaspg pacygaggpl titdvnlllg kldaskfgip vraeaamaal talqnnietq
      481 tgnwlsfqel lsglesiane kmsdairkis vekginpadf alitfggagg lhscqladll
      541 diqiviipyd aglfsavgmg ealistivsk qillpwreae dqiehwktel lqegaenlqn
      601 qgvnvfetaf cyvylrfagq entievsyeg aetlnayekl ytaqfgyypa nltveleslk
      661 lmvqeraapi vpetiikegl pvnalrtikp lfqtdlskse liktknfdse naanlfewdq
      721 ldagdqiigp aillnststa yipngwklii qnskdaiafk tsetpvtaer qseevalqlf
      781 tnrfksiade mgvqlqrtaf svnvkerldf scalldqdge llvnaqhipv hlgsmgicgr
      841 lvkdaieisp gdviitnhpk yggshlpdit lisgiftpdn icigyvinra hhaevggktp
      901 gsmppnatcl aeegviilpq ylikknvfqw dairslfteg pfptrhflsn eadiiaalsa
      961 lrkgseqmlk lvdlhgldtv qkymtllken avaqletalm plhgqtfeat elmdddhriq
     1021 vvvsispekq vfdftgtskv hpnnlnanis ilysavlyvl rllvnkeipl ndglmknvdi
     1081 vlpensflhp dfsddpfqcp avvggntevs qrlvdtllka fglaacsqgt mnnflfgdeq
     1141 fgyyetiggg tgagpgfhgr savhqhmtnt ritdpeqler kypvrllefg irknsggkgt
     1201 fnggdgigrk feflkplqvt lmgqhrkfap yglnggedgk cgvhtlisgd etsllpgics
     1261 lkaeegdilv ietpggggfg
//
LOCUS       WP_235137333             516 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Dyadobacter fanqingshengii].
ACCESSION   WP_235137333
VERSION     WP_235137333.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 516)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..516
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=57139
     Region          116..>169
                     /region_name="PA"
                     /note="Protease-associated (PA) domain. The PA domain is
                     an insert domain in a diverse fraction of proteases. The
                     significance of the PA domain to many of the proteins in
                     which it is inserted is undetermined. It may be a
                     protein-protein interaction domain. At...; cl28883"
                     /db_xref="CDD:333703"
     Region          285..505
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mkkifyslmf cpglllaqei dqaalakirk egmenskvke iahqltdvsg prltnspgfq
       61 raaewsviel kkwglqnsri edwgefgkgw qveksylamt kpyympfiai pkawtsgtag
      121 pikgevvvvn iqneedlkky adgkltgkiv lvkgpadtdp tfkpdavryt tedldkmtns
      181 qpfgqsnftp eqaermrtmr sfrsrvdstm kaqkislela gragkhgtff tsngasykgd
      241 aplagpafem apehaglvar liesgipvtl eaesqtsffd kklttgnvia eipgtdpklk
      301 devvmlgghl dswhsatgat dnaagctvml eavrilqasg lkprrtiria lwsgeeqglh
      361 gsrnytknif gdyetmkllp aheklsayyn idngtgrirg iylqgnegpr alfekwfapf
      421 ndiidhptit srntggtdhl afdvlglpgf qfiqdgieyg trthhtnvdt yerlvmddlk
      481 qmavvvatfv yntaqldqki prkelpkpkt paevrk
//
LOCUS       WP_235137343             688 aa            linear   BCT 02-MAR-2025
DEFINITION  sialate O-acetylesterase [Dyadobacter fanqingshengii].
ACCESSION   WP_235137343
VERSION     WP_235137343.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 688)
  AUTHORS   Surolia,I., Pirnie,S.P., Chellappa,V., Taylor,K.N., Cariappa,A.,
            Moya,J., Liu,H., Bell,D.W., Driscoll,D.R., Diederichs,S.,
            Haider,K., Netravali,I., Le,S., Elia,R., Dow,E., Lee,A.,
            Freudenberg,J., De Jager,P.L., Chretien,Y., Varki,A.,
            MacDonald,M.E., Gillis,T., Behrens,T.W., Bloch,D., Collier,D.,
            Korzenik,J., Podolsky,D.K., Hafler,D., Murali,M., Sands,B.,
            Stone,J.H., Gregersen,P.K. and Pillai,S.
  TITLE     Functionally defective germline variants of sialic acid
            acetylesterase in autoimmunity
  JOURNAL   Nature 466 (7303), 243-247 (2010)
   PUBMED   20555325
REFERENCE   2  (residues 1 to 688)
  AUTHORS   Bitto,E., Bingman,C.A., McCoy,J.G., Allard,S.T., Wesenberg,G.E. and
            Phillips,G.N. Jr.
  TITLE     The structure at 1.6 Angstroms resolution of the protein product of
            the At4g34215 gene from Arabidopsis thaliana
  JOURNAL   Acta Crystallogr D Biol Crystallogr 61 (Pt 12), 1655-1661 (2005)
   PUBMED   16301800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015585.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03629.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..688
                     /product="sialate O-acetylesterase"
                     /calculated_mol_wt=75205
     Region          <256..344
                     /region_name="SASA"
                     /note="Carbohydrate esterase, sialic acid-specific
                     acetylesterase; pfam03629"
                     /db_xref="CDD:427409"
     Region          610..684
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mtrklrehcf qvspgdsfdf ryfclallll fsicangqla lttptnnqiv qrdnagsali
       61 aitayafqpy asiqghltpi egnihkaktw vfeeeqlrqg fltasieaet gwynlkisav
      121 lpngnidsvl idrvgvgevf lvagnsnamg lpglgaksas nqvisinavn kalnadnitv
      181 apnepmrqld fsilekdnfi fpsgetawyw gelgdliskr lktpvlflna awaaansdsy
      241 rdaatgkdaf npyvgkswpn rqpysnivnt irhlnsrlgi ravlwshgen daqlkfteqd
      301 yfnniqtlit naradagyhv pwviarnsas nivkdpylpv inaqnrlssl ngfntfpgpn
      361 ldtiqiprpv sehfenvpgg iqgltlaasa wnraltdslf kkiipvqpan sihsgivpst
      421 afpgssfyvg ykvngenetg lalraelfde sgkfvdtvgi gsenpllikl ptnladgqyn
      481 irlagtspnl agstsslfyv nnayksvqvv ntisavkmnq tihvtwlvaa npgmqrmvle
      541 kttngdiytd lqqysipdng kssgiyaftd sdadakiify rvrmeyadgt tsyspivtil
      601 epgalprlva fpnpvtrqaf yletdqarpa prlslfdisg sahpffvsdr eiigllsvrp
      661 iyplpagiyv lrivteagts tqrmtfvd
//
LOCUS       WP_235137347             851 aa            linear   BCT 02-MAR-2025
DEFINITION  PspC domain-containing protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235137347
VERSION     WP_235137347.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 851)
  AUTHORS   Brissette,J.L., Weiner,L., Ripmaster,T.L. and Model,P.
  TITLE     Characterization and sequence of the Escherichia coli
            stress-induced psp operon
  JOURNAL   J Mol Biol 220 (1), 35-48 (1991)
   PUBMED   1712397
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015957.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04024.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..851
                     /product="PspC domain-containing protein"
                     /calculated_mol_wt=92895
     Region          138..219
                     /region_name="PspC"
                     /note="Phage shock protein PspC (stress-responsive
                     transcriptional regulator) [Transcription, Signal
                     transduction mechanisms]; COG1983"
                     /db_xref="CDD:441586"
     Region          224..287
                     /region_name="PspC"
                     /note="Phage shock protein PspC (stress-responsive
                     transcriptional regulator) [Transcription, Signal
                     transduction mechanisms]; COG1983"
                     /db_xref="CDD:441586"
     Region          669..849
                     /region_name="DUF2807"
                     /note="Putative auto-transporter adhesin, head GIN domain;
                     pfam10988"
                     /db_xref="CDD:431583"
ORIGIN      
        1 mkktisinig giifhieedg yeklkgylss iqkyfssfad skeilsdieg riaerflnkq
       61 kaeakqvisl sdvdeliaam gtvadfeaie qaediladpl esaaskgytp keeayaasas
      121 sssysapkte pvnaggprkl yrdlrrkllg gvaaglahyf tidpiwvrla flfmviglpa
      181 gsgmmdlnme defgplsgfm vlvyiamwva fpgsttleed aqikkfyrdp drkvvggvaa
      241 gvasyfgvdl gvvrflwvls illfgtgvlv yiilwviapv antltekmem qgepitlsni
      301 esnikqslnl eektgeehil tkvllfpfra ialiigalgr vlrglgpiir iligasliam
      361 avmalltlvi ggavalgvtn svpfdnlpip flifqelpdt lilsgllata ipfitflllg
      421 ltllsnkrvv gssvwltllg lwivgiigst iggisyqrnf arrgevlqst fyafpqgtlt
      481 fdhnytdded nvdvhismeg yntadsikld krlvsrgatt adakknaqal tydievkdsv
      541 fvfndgpvfg kggrfrdqqi dvtvnlpynk pfymtrdfyh nlshwesrhh mlkrydvdns
      601 eiswnkllwm vksdsglvci nlpakfilde erdnndnseg ftfdinddns nvelgergny
      661 ikqfpvgsft kidiggaysi lvrqgaefnv sadseteeav ddlkvtveng tlrvksssft
      721 ifdqnnwkri glvitmptve glslsgankt rvvgftglek ldvdiagask meinlevkel
      781 nldiagasra flkgsansat ldahgacklt atemsiqnan veasgaskie lgripnlskn
      841 angaskinae e
//
LOCUS       WP_235137398             235 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235137398
VERSION     WP_235137398.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 235)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 235)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 235)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 235)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..235
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=25962
     Region          1..>220
                     /region_name="GldA_ABC_ATP"
                     /note="gliding motility-associated ABC transporter
                     ATP-binding subunit GldA; TIGR03522"
                     /db_xref="CDD:132561"
ORIGIN      
        1 msiqvtnltk lygtqraidg isfslkkgei vgflgpngag ksttmkiltg ylkasegsak
       61 vsdydvaqep mparrtigyl pehnplyldm yvsefllfsg klygmksael rtrvyevial
      121 cgleaekrkk igqlskgyrq rvglaqsflh npsvlildep ttgldpnqiq eirdvirnag
      181 kdktvlfsth imqevealcd rviiinkgkv vsdssldelr ktgdsleeif rsltk
//
LOCUS       WP_235137429             282 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma factor [Dyadobacter fanqingshengii].
ACCESSION   WP_235137429
VERSION     WP_235137429.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 282)
  AUTHORS   Campbell,E.A., Muzzin,O., Chlenov,M., Sun,J.L., Olson,C.A.,
            Weinman,O., Trester-Zedlitz,M.L. and Darst,S.A.
  TITLE     Structure of the bacterial RNA polymerase promoter specificity
            sigma subunit
  JOURNAL   Mol Cell 9 (3), 527-539 (2002)
   PUBMED   11931761
REFERENCE   2  (residues 1 to 282)
  AUTHORS   Malhotra,A., Severinova,E. and Darst,S.A.
  TITLE     Crystal structure of a sigma 70 subunit fragment from E. coli RNA
            polymerase
  JOURNAL   Cell 87 (1), 127-136 (1996)
   PUBMED   8858155
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04542.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..282
                     /product="sigma factor"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=32083
     Region          10..280
                     /region_name="PRK08241"
                     /note="RNA polymerase subunit sigma-70; cl30683"
                     /db_xref="CDD:357559"
ORIGIN      
        1 miltseilnl haylfriayn mlgvveeaed ivqdvyekwl saqrvrepka ylgrmavnss
       61 inrlnelkkh resyigpwlp epyitlepdp sptieygllf llerlnpfer avfilresfl
      121 eeytaiaelt glsvdncrql lhraheklgr fknqtlepas qrarteafll alqqqdrpal
      181 dqllksdiel fsdgggkraa alkpllglek vlkflfgvaq lpenhesefe yrpafanglp
      241 aallfrrstg nldsmsyvvg dtsgiarlly vrnpdklhir dk
//
LOCUS       WP_235137446             390 aa            linear   BCT 02-MAR-2025
DEFINITION  AIR synthase-related protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235137446
VERSION     WP_235137446.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 390)
  AUTHORS   Li,C., Kappock,T.J., Stubbe,J., Weaver,T.M. and Ealick,S.E.
  TITLE     X-ray crystal structure of aminoimidazole ribonucleotide synthetase
            (PurM), from the Escherichia coli purine biosynthetic pathway at
            2.5 A resolution
  JOURNAL   Structure 7 (9), 1155-1166 (1999)
   PUBMED   10508786
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014788.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02769.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..390
                     /product="AIR synthase-related protein"
                     /calculated_mol_wt=42609
     Region          34..371
                     /region_name="PurM-like"
                     /note="AIR (aminoimidazole ribonucleotide) synthase
                     related protein. This family includes Hydrogen
                     expression/formation protein HypE, AIR synthases, FGAM
                     (formylglycinamidine ribonucleotide) synthase and
                     Selenophosphate synthetase (SelD). The N-terminal
                     domain...; cl10019"
                     /db_xref="CDD:471963"
     Site            order(50..53,55,92,103,106,109,147,158..159,163)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:100032"
     Site            order(88,92,145..147)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:100032"
ORIGIN      
        1 mkttdrylqr gvsaskedvh kaiekidkgl fpkafckivp dtlagdpeyc timhadgagt
       61 ktslaylywk etgdisvwkg iaqdaivmnt ddllcvgatg pmlysstidr nknripgevi
      121 aevingaeev lemlrsygve iystggetad vgdlvrtvtv nstviarmkr sevvdnanit
      181 agdvivglas cgqatyeqvy nggmgsnglt sarhdvlgky laakypesfd pevsqdliys
      241 gtkkltdpve gtplnvgqlv lsptrtyapv akalldemrt aihgmvhcsg gaqtkilhfv
      301 dnlhiikdnl lpvpplfkmi qeesgtdwee mykvfnmghr leiylpqqha drvieisrsf
      361 gieaqvvgrv easetkrlti tsefgqfqys
//
LOCUS       WP_235137527             295 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5777 family beta-barrel protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235137527
VERSION     WP_235137527.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040196.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19089.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..295
                     /product="DUF5777 family beta-barrel protein"
                     /calculated_mol_wt=33084
     Region          42..284
                     /region_name="DUF5777"
                     /note="Membrane bound beta barrel domain (DUF5777);
                     pfam19089"
                     /db_xref="CDD:436955"
ORIGIN      
        1 mkllrlmmml tcsttvlyaq ddllselskq dsmvtvpvsa tfkstrvvng hsvetmkkkh
       61 ldfrishrfg rlnsgayqff gldqatmrmg feygitddfm igvgrstsqk vydffgklkv
      121 lkqsegvrni pvsvtlfggt gvatvnkele fqdklyysaq vliarkfger lslqlsptfl
      181 hrnkpevlgd ekvllalgig grfklskrvs lngeyfytar ekntvtapyy dsmsfgvdie
      241 tgghvfqlhf tnslgmiekq figetagtwg kgdihygfnl srtfsfdkkn kkvan
//
LOCUS       WP_235137545             487 aa            linear   BCT 02-MAR-2025
DEFINITION  M28 family peptidase [Dyadobacter fanqingshengii].
ACCESSION   WP_235137545
VERSION     WP_235137545.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016289.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04389.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..487
                     /product="M28 family peptidase"
                     /calculated_mol_wt=53199
     Region          40..450
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     Region          250..453
                     /region_name="Iap"
                     /note="Zn-dependent amino- or carboxypeptidase, M28 family
                     [Posttranslational modification, protein turnover,
                     chaperones, Amino acid transport and metabolism]; COG2234"
                     /db_xref="CDD:441835"
ORIGIN      
        1 mkkivhvvlm ggfialfagf splekkwekp fsrldnevrk nskayqtlge atktighrlt
       61 gsvngekaee yafqllksyg ftdvsfqpfe veawmrdtvt lsiapgssdn frevpvvsla
      121 hspveanlqg eivdvgngle edfeaikeri kgkvalanin lvgapgkknl hrsektalai
      181 kygasgvimv ngapgkillt gtasvtgaii sipavcisnd sggelrkwlk eegpleahid
      241 mhniskpika rnvvatlkgk sdekviiggh ldswdlatga idngigsfav mdiartfkal
      301 kvkpertiqf vlfmgeeqgl lgskhfvsel kksgeinkvs ymmnldmtnd pkgvnafgrd
      361 emneffagvg saiqhvdrsf knessnragl hsdhqpfmle gvpiaglsgh ldpnvlqcyh
      421 adcddfslvn knqfentvri asmylyalan tetiavskls daktrdylis qglkeelvig
      481 qewrweq
//
LOCUS       WP_235137603             560 aa            linear   BCT 02-MAR-2025
DEFINITION  RagB/SusD family nutrient uptake outer membrane protein
            [Dyadobacter fanqingshengii].
ACCESSION   WP_235137603
VERSION     WP_235137603.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 560)
  AUTHORS   Goulas,T., Garcia-Ferrer,I., Hutcherson,J.A., Potempa,B.A.,
            Potempa,J., Scott,D.A. and Gomis-Ruth,F.X.
  TITLE     Structure of RagB, a major immunodominant outer-membrane surface
            receptor antigen of Porphyromonas gingivalis
  JOURNAL   Mol Oral Microbiol 31 (6), 472-485 (2016)
   PUBMED   26441291
REFERENCE   2  (residues 1 to 560)
  AUTHORS   Bolam,D.N. and Koropatkin,N.M.
  TITLE     Glycan recognition by the Bacteroidetes Sus-like systems
  JOURNAL   Curr Opin Struct Biol 22 (5), 563-569 (2012)
   PUBMED   22819666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07980.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..560
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /calculated_mol_wt=62455
     Region          40..513
                     /region_name="SusD"
                     /note="starch binding outer membrane protein SusD;
                     cl21747"
                     /db_xref="CDD:451378"
     Region          314..559
                     /region_name="SusD_RagB"
                     /note="SusD family; pfam07980"
                     /db_xref="CDD:429768"
ORIGIN      
        1 mkikitallm afslagltsc edylsetnks gltqdpffqt elgitaavna sysgtrlwyg
       61 kefpsafaet gtdlflrggd nkanqisdyt vdlngaqtnl kdywghlyka lntcntalkl
      121 lpapilseam nkqyegevrf lrahylwlit etwgdvvlqt eptagavtta nrssvedfyk
      181 vifadldiai anlapakstn gritqdvaka fkarmaltra sstnnaemya taatlakevi
      241 asgrytlfsd fkslwdmkns eggansevvy yvnytnddtm ngdydaaagk gnnshlhfim
      301 vydkqpgmer svaygrpyqr yvptlhlldl fnekvdqrya gsfqtvwlan vpnlkagtvn
      361 gypkmafgdt smvfmktvat paqvanaagr ykifdrntmy kedgslllrs qfiqmsklmd
      421 ptrltanqew ssrdgfviri aelyliaaea lmktnpaeal tyindlrkkr aipgkeasma
      481 itakdlnidf ilderarela gelfrwydlk rtgklvsyvq kynadakani kethnvrpip
      541 qvqldaitnk eefkqnpgyn
//
LOCUS       WP_235137648             373 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Dyadobacter fanqingshengii].
ACCESSION   WP_235137648
VERSION     WP_235137648.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..373
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=43190
     Region          4..364
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mkrrilllst vhpatdpril ykiapslake yhvfcalpna ksnaangtft miwlpefrsl
       61 flrllfshiv vlykclrirp dlvhifvpel ipiafvckwl ganviyevqe nlfkkfsikt
      121 ynnawlyrrl fwffdhcarq hfalifteda ylieydrlah paaivrnyal psfidtypah
      181 rpltgmspei vymgvisler sfdvivvala tlkkcypdfk mhlfgslria qneieklpgy
      241 deiaenltfy gytdqkkifg yarnaiagia llkpvadype syttklfeym slnlpvitsd
      301 fplygnvveq sgcgfcispy radllseklq wlienpeeri rmgvcgrksv eetynwksee
      361 gtllsfyrtw lkn
//
LOCUS       WP_235137658             290 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Dyadobacter fanqingshengii].
ACCESSION   WP_235137658
VERSION     WP_235137658.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 290)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 290)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..290
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=32985
     Region          3..290
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(131,145..146,215,217,236,271)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:271175"
     Site            order(145,236,239,262,271)
                     /site_type="active"
                     /db_xref="CDD:271175"
ORIGIN      
        1 mitlfidflk fekrasvhti ksyqtdldqf qkyllfqyel dkpqeakapm lrswvvslme
       61 egmnpssinr kiaslrtffg flkrknaisq dptkilsalk trkklpafve eksmemlfqp
      121 dtftedfegv rdrtimelly gsgirlaelv sleindlslp artirvfgkr skervvpist
      181 slanllfqyl tlrapeedtn vliltnsgka vypvfvqrtv gkylsavttl sqksphvlrh
      241 tyathllnrg adlnaikell ghanlaatqi ythnsieklk kthqqahpka
//
LOCUS       WP_235137750             411 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleoside recognition domain-containing protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235137750
VERSION     WP_235137750.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 411)
  AUTHORS   Hantke,K.
  TITLE     Is the bacterial ferrous iron transporter FeoB a living fossil?
  JOURNAL   Trends Microbiol 11 (5), 192-195 (2003)
   PUBMED   12781516
REFERENCE   2  (residues 1 to 411)
  AUTHORS   Loewen,S.K., Ng,A.M., Yao,S.Y., Cass,C.E., Baldwin,S.A. and
            Young,J.D.
  TITLE     Identification of amino acid residues responsible for the
            pyrimidine and purine nucleoside specificities of human
            concentrative Na(+) nucleoside cotransporters hCNT1 and hCNT2
  JOURNAL   J Biol Chem 274 (35), 24475-24484 (1999)
   PUBMED   10455109
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019292.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07670.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..411
                     /product="nucleoside recognition domain-containing
                     protein"
                     /calculated_mol_wt=44312
     Region          2..204
                     /region_name="SpmA"
                     /note="Spore maturation protein SpmA (function unknown)
                     [General function prediction only]; COG2715"
                     /db_xref="CDD:442028"
     Region          237..411
                     /region_name="SpmB"
                     /note="Spore maturation protein SpmB (function unknown)
                     [Function unknown]; COG0700"
                     /db_xref="CDD:440464"
ORIGIN      
        1 malnyifvgf fviafviafl kfiltgdvqt fkaitegmle makvavmdia lpltgvmaff
       61 lgilnvgeka giinalarfi gpffnklfpe vpkdhpangq mimnfsanfl gldnaatpfg
      121 lkamqslqel npskdtasna qimflvlhts glqiiplsii aqrailgaes psdvfipcvv
      181 gtyittvvsm litaawqkin lfnrtvmlgl gsittiiali lwylsslpke qietvsifvg
      241 nsvllgvvag flfwgmyrkv nvfetfiega kagfttsvti ipylvgllva isafracgam
      301 dylidglkwm faltgmntdf tdalpvalmk plsgsgaral midamkefgp dsfigrlvci
      361 fqgsadttly ivalyfgsvg ikntryaiva gliadligvl agiwlgylff h
//
LOCUS       WP_235137761             516 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Dyadobacter fanqingshengii].
ACCESSION   WP_235137761
VERSION     WP_235137761.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 516)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..516
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=56979
     Region          277..493
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mkrisflfll fsiiqiqhgf sqskdpiven ivkeatensq leklahelmd vigprlvgsp
       61 qmqqahewav akykgwnita knekwgewrg wergvshidm vaprvksleg mqlawspgtg
      121 gktvtaevii lpdvadslaf qkwlqtakgk fvmismnqpt grpdynwqef atkesfekmk
      181 kerdvqteaw adrlkksgyt artlplalek agaagvvmsy wskgfganki fgaytktipt
      241 vdisledygl lyrlsesght pkisvradak etgvsqtfnt igeikgsekp neyvilsahf
      301 dswdggtgat dngtgtivmm eamrilkkvy pnpkrtilvg hwgseeqgln gsrafvedhp
      361 eivqniqavf nqdngtgrvi nlsgqgflns yeylsrwlak vpdnikapie skfpgapgag
      421 gsdfasfvaa gapafslssl nwsygtytwh tnrdtydkiv fddvrsnail aaimayqase
      481 dpaktsreks vlpldakgep gvwpeprkpt rrggld
//
LOCUS       WP_235137779             347 aa            linear   BCT 02-MAR-2025
DEFINITION  LiaF transmembrane domain-containing protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235137779
VERSION     WP_235137779.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046770.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22570.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..347
                     /product="LiaF transmembrane domain-containing protein"
                     /calculated_mol_wt=38571
ORIGIN      
        1 mknsrgivwg gllvilgmlw llrnlnllni nwdevlpywp vllilagall latgnesrgf
       61 ggviallitl avfggivnkt deafdrhagn wdwnwddddd drnfgyndhd nndhdeddng
      121 ehdenyendr knrdgkrpin gnykyemedf iqkanfhleg gagsftlngn tqklfeantk
      181 stmvgflsnt sinkldnsat vnlkmeegnv kinegeisnq akiqlnekpi wnidlgigag
      241 kgdfdfsnyk veklkvstgv admdikmgdk mttsnidiea gvasitlelp rsvgcemhmd
      301 galnaknmdd ldkisnglyr spdfdnaskk iiihfegglt svnikry
//
LOCUS       WP_235137837             524 aa            linear   BCT 02-MAR-2025
DEFINITION  SusD/RagB family nutrient-binding outer membrane lipoprotein
            [Dyadobacter fanqingshengii].
ACCESSION   WP_235137837
VERSION     WP_235137837.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 524)
  AUTHORS   Koropatkin,N., Martens,E.C., Gordon,J.I. and Smith,T.J.
  TITLE     Structure of a SusD homologue, BT1043, involved in mucin O-glycan
            utilization in a prominent human gut symbiont
  JOURNAL   Biochemistry 48 (7), 1532-1542 (2009)
   PUBMED   19191477
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024181.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12771.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..524
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /calculated_mol_wt=56992
     Region          30..498
                     /region_name="SusD-like_2"
                     /note="Starch-binding associating with outer membrane;
                     pfam12771"
                     /db_xref="CDD:463695"
ORIGIN      
        1 mkryniswml vllvtvlssc sdyldinnnp nqatsvqpll vlpaaitgta svssqfnsyg
       61 ahfggymana ggfsgfgnlf nyqlipdnyn alwvnaydnl ndykyvidqt egdntqayan
      121 aaanimvayn fqklvdafgd vpytealqnn anltpkydda atiyqdlitk ldaamalida
      181 aefptalnss sdpmfggdme ewkkfantik lrilirisgv paltafattq faaldktlgf
      241 itddamvnpg yvkdkpnplw ntwgyqstgt lanssrlpte fafgfyggqk lsdegrgsvt
      301 yvnfdggtpv nqlgneveap tiitnysswy sgefnsassi snalgvlkgp sqgqvlmlla
      361 eaqflqaear lkgfitgdyi asfdagiaas ytylykdvtn vvaagknvaa dvaayktgna
      421 arylvnikla ttpaqrleai itqkwiavnm inseegynef rrtgypvtvp ngdgyhnias
      481 llststradk lpsrilypts eqsynagnyr vinpftdlif wdpn
//
LOCUS       WP_235137844            1001 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 N-terminal domain-containing protein
            [Dyadobacter fanqingshengii].
ACCESSION   WP_235137844
VERSION     WP_235137844.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 1001)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00933.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..1001
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=111448
     Region          49..446
                     /region_name="BglX"
                     /note="Periplasmic beta-glucosidase and related
                     glycosidases [Carbohydrate transport and metabolism];
                     COG1472"
                     /db_xref="CDD:441081"
     Region          413..601
                     /region_name="Glyco_hydro_3_C"
                     /note="Glycosyl hydrolase family 3 C-terminal domain;
                     pfam01915"
                     /db_xref="CDD:396478"
     Region          608..991
                     /region_name="AmpC"
                     /note="CubicO group peptidase, beta-lactamase class C
                     family [Defense mechanisms]; COG1680"
                     /db_xref="CDD:441286"
ORIGIN      
        1 mkhpylllll iilfssknsq sqiaappafl qqnaasesrq wvdsvfatlt pderiaqlim
       61 vaavsdvkra vidpktsnpa vveklirenk vggivffqgg pvpqaqltnf yqsiskvpll
      121 iamdaefgla mridstvryp yqmtlgaiqg sndliyemga qlakqarrlg mhinfapvad
      181 vnnnpdnpvi sfrsfgenky kvadkavaym kgmqdngllt sakhfpghgd tgvdshydlp
      241 lishntdrld slelypfkal iangisgmmi ahlsipaldk tpnlpstlsk pivsdllrkq
      301 lgfdgliysd amnmkgvtky fpngradamg leagmdllef tedvsksiae ikksiaegki
      361 tqadidarck kvlqakawag lnhykpidln nlykdlnpks aeltnrllte kaltilkndk
      421 dllplrdldt lkiasvslga dtittfqktl glyttiehfy ipakatetqv telreklkaf
      481 nlllvgvhlg sisprtnygl teqmnavlqe liasnkavvs ifgnpyslnk iqkpenaral
      541 lmayqltpyt qdlsaqlifg aipaqgklpv tvnaqfpyns gietpaigrl kytipeelgl
      601 dseiltyrid siannaltqk atpgcvvqla kdgkvffrka ygkhtyegna nvkltdlydl
      661 asvtkitast lalmslwdqk kfdldatmed ylpdfgksnk adlpwrrvlt hsarlkafiv
      721 lwkeaqnadg swkkktfstk qskryptsvv gdslfifkny dkkifeaird splnekegyv
      781 ysdlsfilyp qivktlsgen fedylknhyy hklgantltf npkrfykled ivpterdtff
      841 rmtqlhgqvh deaaamlggl sghaglfgda ndvmkvwqmy lqqgyyggqq llskdalief
      901 tryqypelgs rrgigfdkpt fkysgnapky aspssfghtg ytgimtwadp awklnyvfls
      961 nrvyptrenn kisqlnirta imdvvyeell kkvnpeatag l
//
LOCUS       WP_235137872             309 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Dyadobacter fanqingshengii].
ACCESSION   WP_235137872
VERSION     WP_235137872.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 309)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..309
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=33904
     Region          32..295
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mkkyiillcf vcqnafaqlp tpdhiskhiy klasdkmqgr gtgskenkka akyvakqfkq
       61 yglqpkgtdg fyqpftakvr rvvvpdslre tnnvigfldn gaentiiiga hfdhlglgrq
      121 gsskaekpeg qihngaddna sgvagllela ryfsqnnvke pynflfiafg aeelgllgsr
      181 hfvnnptlpl dkinfmsnmd migrydasrg vgiggfgtse ewpdifkgvk setkfftdka
      241 gsggsdhgsf yakkipvlff htgghddyhk ptddsekidy kaaagilgiq iqlienamkl
      301 pklkfttvl
//
LOCUS       WP_235137898             387 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235137898
VERSION     WP_235137898.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 387)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 387)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02771.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..387
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=42595
     Region          5..386
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(101,131,133,164,166,364..366,368,370)
                     /site_type="active"
                     /db_xref="CDD:173840"
ORIGIN      
        1 mptpdffniy dlltteqqli astikdftdr eikpiiedya qkaafplhli kkfgeiglfg
       61 atipaeyggg gldyisyglm cqeiergdsg mrstisvqss lvmwpifafg seeqkrkylp
      121 glasgemigc fgltepdhgs npagmqtris ktekgyllng skmwisnapf aniaivward
      181 eegkvrglia ergmegfstp eihhkwslra satgelvfdn vlipeenilp dasglkaplq
      241 cldkarygis wgvigaamdc yetavryaae riqfdkpiaa fqltqkklae mlteitkaql
      301 lawrlgtlmn egkasttqis makrnnvama lntarecrqi lgamgisgey pimrhmmnle
      361 svityegtnd ihllilgaei tgiqafk
//
LOCUS       WP_235137962             304 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase [Dyadobacter fanqingshengii].
ACCESSION   WP_235137962
VERSION     WP_235137962.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..304
                     /product="PfkB family carbohydrate kinase"
                     /calculated_mol_wt=33694
     Region          6..271
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
     Site            order(33,237,240)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238177"
     Site            order(176,207,235,238..239,242)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238177"
ORIGIN      
        1 mkmydictig hitldkvvta qsvkympggt sfyfskalrh fdvdymlvta laekenhivs
       61 alrdeniqvf sqpsehtvyf eniysanqdh reqnvlhkaa pfttaqmpdi earifhlgpl
      121 lsdditvdll kslaqkgtvs ldiqgylryv kdqkvlykdw adkkealphv silkanefem
      181 evvtgtsdvr kgaeyladlg vkeviitlgs kgsliykdnd ffripaykpt aivdatgcgd
      241 tymagylskk iqgadiqeag efgaamatlk iqssgpfsgn aamveevlqy gecdremiaq
      301 aiyq
//
LOCUS       WP_235137964             416 aa            linear   BCT 02-MAR-2025
DEFINITION  Pycsar system effector family protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235137964
VERSION     WP_235137964.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 416)
  AUTHORS   Tal,N., Morehouse,B.R., Millman,A., Stokar-Avihail,A., Avraham,C.,
            Fedorenko,T., Yirmiya,E., Herbst,E., Brandis,A., Mehlman,T.,
            Oppenheimer-Shaanan,Y., Keszei,A.F.A., Shao,S., Amitai,G.,
            Kranzusch,P.J. and Sorek,R.
  TITLE     Cyclic CMP and cyclic UMP mediate bacterial immunity against phages
  JOURNAL   Cell 184 (23), 5728-5739 (2021)
   PUBMED   34644530
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040152.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18967.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..416
                     /product="Pycsar system effector family protein"
                     /calculated_mol_wt=47437
     Region          8..196
                     /region_name="COG4339"
                     /note="Predicted metal-dependent phosphohydrolase, HD
                     superfamily [General function prediction only]"
                     /db_xref="CDD:443480"
     Region          288..399
                     /region_name="DUF5706"
                     /note="Family of unknown function (DUF5706); pfam18967"
                     /db_xref="CDD:465934"
ORIGIN      
        1 mnynhrldkv rhhvhhffgt kelaqlsyhn lvhteavvsn avkianhyrl edketfiavt
       61 aawfhdtgys tgeaagheqr gaalaadflr seeieesvia evegcilati wpqnpqnflq
      121 qvvcdadlfh fgtpefsdwn klvrkeaeqr sgkkmdkaqw rkstialles htfqtdycrd
      181 lldkqkrkni dklkekelen sgipeetlsi aenpvvesga qpfipatape imdikkiknd
      241 rpdkgietmf rissnnhqrl sdmadnkahi mitttsiiis vllsilirkl edntylivpt
      301 mllltvcmvt mvfsilstrp tiphgtftqe didtkdvnll ffgnfyrmsy tdysngmqrm
      361 mndreflygs ltkdvysqgv vlgrkyrllr iaynvfmfgi vvsviafvta saifeh
//
LOCUS       WP_235137966             286 aa            linear   BCT 02-MAR-2025
DEFINITION  SdiA-regulated domain-containing protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235137966
VERSION     WP_235137966.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 286)
  AUTHORS   Ahmer,B.M., van Reeuwijk,J., Timmers,C.D., Valentine,P.J. and
            Heffron,F.
  TITLE     Salmonella typhimurium encodes an SdiA homolog, a putative quorum
            sensor of the LuxR family, that regulates genes on the virulence
            plasmid
  JOURNAL   J Bacteriol 180 (5), 1185-1193 (1998)
   PUBMED   9495757
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018659.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06977.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..286
                     /product="SdiA-regulated domain-containing protein"
                     /calculated_mol_wt=32111
     Region          1..283
                     /region_name="YjiK"
                     /note="Uncharacterized Ca-binding beta-propeller protein
                     YjiK [General function prediction only]; COG3204"
                     /db_xref="CDD:442437"
ORIGIN      
        1 mttflqqlgm lamlgfslgg cdstkkeqvi ykdynldepd kfnmpeslfe isgialkqgn
       61 pdtlyaiqde dgrvyrlgwd hpkqlnvkfs kkgdyedvti lkssvfilks ngvmfsfpls
      121 eavyeeveqi reykkilpkg eyegmfgdea sgkiyvlckn ceqdnskssv tgyifepdkd
      181 stqatgtfai nvdqikaitg kvergfrpsg laknpltndw yiisavnklm ivtdsewkvk
      241 eaytlngntf iqpegitfdk qgnlyisneg ddlfsgnilk fkkmgr
//
LOCUS       WP_235138028             168 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6265 family protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235138028
VERSION     WP_235138028.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039391.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19780.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..168
                     /product="DUF6265 family protein"
                     /calculated_mol_wt=19124
     Region          43..151
                     /region_name="DUF6265"
                     /note="Domain of unknown function (DUF6265); pfam19780"
                     /db_xref="CDD:466183"
ORIGIN      
        1 mtkqagfltn garkclivll lastsmiqne gytksdfekl naivgswkmq rtggdmyetw
       61 hrvspsefsg vsyklengdt vkletvrlyl snrrviyapv tfgqndekev lfdlksiqgk
      121 kfifenpkhd fpqrigyafl padslhayie gtidskprhi dykysklk
//
LOCUS       WP_235138003             486 aa            linear   BCT 02-MAR-2025
DEFINITION  arginine deiminase family protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235138003
VERSION     WP_235138003.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 486)
  AUTHORS   Shirai,H. and Mizuguchi,K.
  TITLE     Prediction of the structure and function of AstA and AstB, the
            first two enzymes of the arginine succinyltransferase pathway of
            arginine catabolism
  JOURNAL   FEBS Lett 555 (3), 505-510 (2003)
   PUBMED   14675764
REFERENCE   2  (residues 1 to 486)
  AUTHORS   Shirai,H., Blundell,T.L. and Mizuguchi,K.
  TITLE     A novel superfamily of enzymes that catalyze the modification of
            guanidino groups
  JOURNAL   Trends Biochem Sci 26 (8), 465-468 (2001)
   PUBMED   11504612
REFERENCE   3  (residues 1 to 486)
  AUTHORS   D'Hooghe,I., Vander Wauven,C., Michiels,J., Tricot,C., de Wilde,P.,
            Vanderleyden,J. and Stalon,V.
  TITLE     The arginine deiminase pathway in Rhizobium etli: DNA sequence
            analysis and functional study of the arcABC genes
  JOURNAL   J Bacteriol 179 (23), 7403-7409 (1997)
   PUBMED   9393705
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014344.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02274.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..486
                     /product="arginine deiminase family protein"
                     /calculated_mol_wt=55253
     Region          9..482
                     /region_name="ArcA"
                     /note="Arginine deiminase [Amino acid transport and
                     metabolism]; COG2235"
                     /db_xref="CDD:441836"
ORIGIN      
        1 mhtkitagtt ihvasetgtl krllihspdr glgkvvpska qdwlfedivh ldtmrrgeyd
       61 yyvklllyfl dpgkikgkla gidndptrsf fipgsenyfs sdcvvdiqkl lgeilennev
      121 rvkltaaicg iercsyntqe elnqydphel akifisgsys dkrmlfaplp nlifmrdigi
      181 vindyillnk paknartres ilaqfvffyh pmfakikdri ieipenerhf llpddekasd
      241 yhrctleggd vmmvapnhlv igcsertsly aaqqvmkllf ekeivtkiti vkipkkrdym
      301 hidtiftqvk knvwvllgsl arlgdeakkq dvlhffgppd thkefrilqf vkgkerkpte
      361 ienledllss isindlgvte pvkfiysgdn efpygereqw tdscnllalk dgvvvgydrn
      421 dktldafrkh gynvisardl iqkleddels vetltdtfit lpsaelsrar ggshcmsmpi
      481 lrvaap
//
LOCUS       WP_235138072             373 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1972 domain-containing protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235138072
VERSION     WP_235138072.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020874.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09314.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..373
                     /product="DUF1972 domain-containing protein"
                     /calculated_mol_wt=42611
     Region          3..358
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mnigiigtrg ipnhyggfeq faeylakglv erghevtvyn snshpyqess wngvnlvhcr
       61 dpedkwgtag qfvydlncil dsrkksfdii lqlgytsstv wgwllprknc vittnmdgle
      121 wsrskyskpv raflkqaeyl atvfsdywis dsigiqdylr ekydipstyi pygaftfdna
      181 dtaalidykv epyrynmlia rlepennvet ildgvaqadv ktpflvignh nttfgeylkk
      241 kftgieyikf iggvydinal nhlryysniy fhghsvggtn pslleamasq slicahknnf
      301 nstilgqdal yfsthgevss hinsvnkqsy akfvdanfek iskiynwnii idqyenhfne
      361 iyyarnkfsk qvl
//
LOCUS       WP_235138081             538 aa            linear   BCT 02-MAR-2025
DEFINITION  MATE family efflux transporter [Dyadobacter fanqingshengii].
ACCESSION   WP_235138081
VERSION     WP_235138081.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01554.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..538
                     /product="MATE family efflux transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=59057
     Region          36..421
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 mqilkgcffq asfglvklfw vlltenlkas dkvilntgil ygrmlitvgi slystrliln
       61 algstdfgif nlvagviaml sflnnamats tqrflsfyqg kndlsaqrkv fsnslllhil
      121 igivivgcle iagkflfedf lnipatrmes aktvyhfmsl svfftivtvp ftgslvanen
      181 mlwvavvsii evifklliai sltavstdrl ifygilmaav namnlflyaa fcfkkydqct
      241 ivgifkpdls fckellsftg wnlfgavcgl artqglavif nlffgavvna aygianqvas
      301 qltffsstll rainpqimks egagqrerml rlamtaskfg fflvavvsip cifemnailn
      361 vwlddvpant vvfcqlilvg alvnqltigv qsaiqatgki kfyqmitgti illnlpityi
      421 llavgksayi glvsytviel aacssrlyfl khlagmsiae yskrvfarel ipvstiitsc
      481 ylittlidip nrfiltsavs gilfivslyf tglereekgl ltnllkkipk ikkiavis
//
LOCUS       WP_235138088             242 aa            linear   BCT 02-MAR-2025
DEFINITION  pseudouridine synthase [Dyadobacter fanqingshengii].
ACCESSION   WP_235138088
VERSION     WP_235138088.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 242)
  AUTHORS   Wrzesinski,J., Nurse,K., Bakin,A., Lane,B.G. and Ofengand,J.
  TITLE     A dual-specificity pseudouridine synthase: an Escherichia coli
            synthase purified and cloned on the basis of its specificity for
            psi 746 in 23S RNA is also specific for psi 32 in tRNA(phe)
  JOURNAL   RNA 1 (4), 437-448 (1995)
   PUBMED   7493321
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013045.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00849.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..242
                     /product="pseudouridine synthase"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /GO_process="GO:0001522 - pseudouridine synthesis
                     [Evidence IEA]"
                     /GO_process="GO:0009451 - RNA modification [Evidence IEA]"
                     /calculated_mol_wt=27689
     Region          9..219
                     /region_name="PseudoU_synth"
                     /note="Pseudouridine synthases catalyze the isomerization
                     of specific uridines in an RNA molecule to pseudouridines
                     (5-ribosyluracil, psi); cl00130"
                     /db_xref="CDD:469624"
     Site            order(58..61,161)
                     /site_type="active"
                     /db_xref="CDD:211324"
ORIGIN      
        1 mtdsthlplq ivyqdeelva inkpngllvh rspiaadadv favqllrdql gqkvfpvhrl
       61 drktsgvllf alneemnslm qqqfqdgkve ktyhaivrgy tpdvldidyp lkkedgaiqe
      121 aftslrtlar tevdfaigkh stsryslvel kpttgrmhql rkhmahifhp iigdrphgcn
      181 kqnryfkerf emnemmlhas eiefqhsltg rhitirapfr kgfaammdll sfvknaenli
      241 ch
//
LOCUS       WP_235138104             582 aa            linear   BCT 02-MAR-2025
DEFINITION  RagB/SusD family nutrient uptake outer membrane protein
            [Dyadobacter fanqingshengii].
ACCESSION   WP_235138104
VERSION     WP_235138104.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 582)
  AUTHORS   Goulas,T., Garcia-Ferrer,I., Hutcherson,J.A., Potempa,B.A.,
            Potempa,J., Scott,D.A. and Gomis-Ruth,F.X.
  TITLE     Structure of RagB, a major immunodominant outer-membrane surface
            receptor antigen of Porphyromonas gingivalis
  JOURNAL   Mol Oral Microbiol 31 (6), 472-485 (2016)
   PUBMED   26441291
REFERENCE   2  (residues 1 to 582)
  AUTHORS   Bolam,D.N. and Koropatkin,N.M.
  TITLE     Glycan recognition by the Bacteroidetes Sus-like systems
  JOURNAL   Curr Opin Struct Biol 22 (5), 563-569 (2012)
   PUBMED   22819666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07980.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..582
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /calculated_mol_wt=65124
     Region          <431..582
                     /region_name="SusD_RagB"
                     /note="SusD family; pfam07980"
                     /db_xref="CDD:429768"
ORIGIN      
        1 mknirfykil pvvvlllgfl gctnleedil desltgtgqa elvsgsiapv ygllrqgvwl
       61 htanfglqev asdegilpyr ggtdwydggk fiaihqhlmt psnslvgdtw tnitltlsra
      121 viaaerlkle aekgntgaqe aynemvamka ylnmmaldnw gvvfkkalss erseilrkqe
      181 aidyiesell svvdlikkdr dpgrlnqnav rallarlyln aavyrdpygt pafskgdmdk
      241 viqytssiia epyslapeyf dlfsdnnhan pelifaldqr gvletehqrw aywpisgdqi
      301 prpefpntrg tdavaatpdf yqtwvdaygn vdpadadarf fkkntiipee lkdltgvtpl
      361 ndaehyycid atkfemdrgi lrgiiwgprk dgggniltcs dgkvriypvi nrrtsganlt
      421 yvnhtrnvdf tgpgslhntg yrfskyqfsh tapnccsyss vdlvlirlge iylmraeakl
      481 rngdnagala dvnalrtsrk arpdqtpdal ksisldilfr esgfelywea frrnyqirfg
      541 kyegswtgkt dtdvnkrlfp ipqravdgas seegfliqnq gy
//
LOCUS       WP_235138131             149 aa            linear   BCT 02-MAR-2025
DEFINITION  FixH family protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235138131
VERSION     WP_235138131.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 149)
  AUTHORS   Kahn,D., David,M., Domergue,O., Daveran,M.L., Ghai,J., Hirsch,P.R.
            and Batut,J.
  TITLE     Rhizobium meliloti fixGHI sequence predicts involvement of a
            specific cation pump in symbiotic nitrogen fixation
  JOURNAL   J Bacteriol 171 (2), 929-939 (1989)
   PUBMED   2536685
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017559.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05751.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..149
                     /product="FixH family protein"
                     /calculated_mol_wt=17010
     Region          2..137
                     /region_name="FixH"
                     /note="cl46415"
                     /db_xref="CDD:480755"
ORIGIN      
        1 mkinwgvgit alymgfvami lvlvsmsirq kidlvtehyy eeelgfqeki dkkqrsaala
       61 dpvkwevqne ginivfpgnv tekdlsgeik lycpsndknd rkfkistqnh aqfipvtnip
      121 agsyhlqidw knkeqaywne dvivighkk
//
LOCUS       WP_235138133             341 aa            linear   BCT 02-MAR-2025
DEFINITION  cbb3-type cytochrome c oxidase N-terminal domain-containing protein
            [Dyadobacter fanqingshengii].
ACCESSION   WP_235138133
VERSION     WP_235138133.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 341)
  AUTHORS   Buschmann,S., Warkentin,E., Xie,H., Langer,J.D., Ermler,U. and
            Michel,H.
  TITLE     The structure of cbb3 cytochrome oxidase provides insights into
            proton pumping
  JOURNAL   Science 329 (5989), 327-330 (2010)
   PUBMED   20576851
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026065.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14715.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..341
                     /product="cbb3-type cytochrome c oxidase N-terminal
                     domain-containing protein"
                     /calculated_mol_wt=37253
     Region          158..>180
                     /region_name="FixP_N"
                     /note="N-terminal domain of cytochrome oxidase-cbb3, FixP;
                     pfam14715"
                     /db_xref="CDD:464278"
     Region          <235..320
                     /region_name="CccA"
                     /note="Cytochrome c, mono- and diheme variants [Energy
                     production and conversion]; COG2010"
                     /db_xref="CDD:441613"
ORIGIN      
        1 mkfrtyleti agigiyplis liiffvffls livfvigidk kslqkmermp lndgvikkgl
       61 lsvlfffmlg gsafaqdqva epiraisgte lillillgii ffaallvvia lvntvtllqk
      121 isappkteah tdpvvswwkk fagmsvmpsq ehhliieghd ydgiqeldnr mppwlqslfv
      181 gtiiigigyg ayyfsgigdy qlaelekeva qaeidkkaym akvgasmden tvtlvseeas
      241 igqgkaifqe kctachgpdg ggsvgpnltd gywlhgagik nlfkvikygv pekgmiswek
      301 qlsptdiqkv asyvyslkdt kpanpkepqg ellsddkvaa n
//
LOCUS       WP_235138139             497 aa            linear   BCT 02-MAR-2025
DEFINITION  c-type cytochrome domain-containing protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235138139
VERSION     WP_235138139.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019262.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07635.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..497
                     /product="c-type cytochrome domain-containing protein"
                     /calculated_mol_wt=53394
     Region          1..158
                     /region_name="COG4244"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:443386"
     Region          196..255
                     /region_name="PSCyt1"
                     /note="Planctomycete cytochrome C; pfam07635"
                     /db_xref="CDD:429568"
     Region          302..>455
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          345..370
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          371..394
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          395..418
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          419..442
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          443..467
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
ORIGIN      
        1 mhyillqdss watfigrfhp aivhfpigfl ligallelgr rwgkvavsen vivfilllsa
       61 vsatfacaag yllslsggyd anllnnhmwk gigvavfawm awavksdnlq rimpsgkviy
      121 lpafliatvl tlstghdggs lthgegyltq ytpepfrgla glppmqqkpt eikpitdvqq
      181 aivytdivqp ileakctqch saskskgdlr mdqlallakg gengpafvag kgaesdmikr
      241 cllpenedeh mppkgkpqlt adqiallsww idqgapaekk vaqltvseav kpalaslgke
      301 apanaenake pavlslkvpk andeaienlr ktglivstls qdqnlleisa vnlpgfsdkq
      361 mellqpvaqq itwlklggta itdaalpqia kfpnlsklhl ehtvitdngi vslkplahlg
      421 yinivdtkvg dkglkaiagm kalrsvyvwq savtdsavsq igrknpdllv mngfneatva
      481 qfvkaggidd kkelknk
//
LOCUS       WP_235138141             523 aa            linear   BCT 02-MAR-2025
DEFINITION  RagB/SusD family nutrient uptake outer membrane protein
            [Dyadobacter fanqingshengii].
ACCESSION   WP_235138141
VERSION     WP_235138141.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 523)
  AUTHORS   Goulas,T., Garcia-Ferrer,I., Hutcherson,J.A., Potempa,B.A.,
            Potempa,J., Scott,D.A. and Gomis-Ruth,F.X.
  TITLE     Structure of RagB, a major immunodominant outer-membrane surface
            receptor antigen of Porphyromonas gingivalis
  JOURNAL   Mol Oral Microbiol 31 (6), 472-485 (2016)
   PUBMED   26441291
REFERENCE   2  (residues 1 to 523)
  AUTHORS   Bolam,D.N. and Koropatkin,N.M.
  TITLE     Glycan recognition by the Bacteroidetes Sus-like systems
  JOURNAL   Curr Opin Struct Biol 22 (5), 563-569 (2012)
   PUBMED   22819666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07980.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..523
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /calculated_mol_wt=58556
     Region          42..468
                     /region_name="SusD"
                     /note="starch binding outer membrane protein SusD;
                     cl21747"
                     /db_xref="CDD:451378"
     Region          263..522
                     /region_name="SusD_RagB"
                     /note="SusD family; pfam07980"
                     /db_xref="CDD:429768"
ORIGIN      
        1 mkniqlhhvr iftlvmlmlt gagcsdlkek pdfinpetfy ktanelklgv navyddlnsg
       61 gfgffydryv fecliggyqv gwekgplqfn lgnvnpadey ieaywgicyr sinranaiie
      121 taeamkdpnn qalidrlkge tlflrafyyy gllsyfddap lsvkstqnit elptnsggnr
      181 aiidqiyadt kaaaellpas ytgadlgrst kwaaksvlmk aqlwdekwad akataediin
      241 nsgitlyadf afnfdlahen qgerifeaqv sataspneys qhsahfnped fpselggsgw
      301 swisttqefr saydpkdkri agtfiesypt grfgkingvy ptvtwspkad ynlsrfggvv
      361 ksdanpkdpa qmifgkawsn kiaeldrrns atekntiyir lsdillghse acnesgqgna
      421 ftsinkvrer aglaalkglt qatlrdaiiq ermqefvfeq vmypelrrks kfggpidyls
      481 keikhfaqky nvdrvpkakd yvlplpvkel lgnpnvkqna twq
//
LOCUS       WP_235138192             721 aa            linear   BCT 02-MAR-2025
DEFINITION  2'-5' RNA ligase family protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235138192
VERSION     WP_235138192.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024952.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13563.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..721
                     /product="2'-5' RNA ligase family protein"
                     /calculated_mol_wt=82619
     Region          223..486
                     /region_name="COG3177"
                     /note="Fic family protein [Transcription]"
                     /db_xref="CDD:442410"
     Region          533..695
                     /region_name="2_5_RNA_ligase2"
                     /note="2'-5' RNA ligase superfamily; pfam13563"
                     /db_xref="CDD:433312"
ORIGIN      
        1 msgdsnfskg dgdpfskrik vihgrqapee allvgygaii ealnlqlpmp aklalisdkh
       61 rqssnddwli ltprhnpadn lyghlvfalk yegvnllffk klfeslgder vkfvisiepk
      121 gqysrriwfl fewlmrrqld ipdlkdgnyv alideeiqya vspavnfarq rirnnlpgtk
      181 dfcplifrts klerfieanl selthtilnn vhrdvilras aflllkdska sfsiegenpt
      241 pnramrwgka mgqagsiqlg eeellrlqqi viensrfvem gfrtdggfvg vhdrtsgtpm
      301 pehisakped lpvllnglfa tasllehqnf hpvlaaasia fgfvfihpfv dgngrlhryl
      361 ihhllaktkf spqgiifpis aaileriddy rksleqyshp lldliewtpt annnvkvlne
      421 tidyyryfda tkqaeflfec vdqtvekiip keveylqryd smkdwldeef empdktvall
      481 irfleqnngr lpnraldref aelskeevea ieeqfyeiml kpplsqysla impsaaisle
      541 vvemkqqlra aigrsygsan aeahisldgf eadendypyi laeyrrivse lnpfeisfsg
      601 fddfdkanys afyikpttes sleirrrsea vmkafdknlk kqytrkwade sqkphmsigr
      661 rltrewvala yatltayeag flcdtfvirk fnekrrqydv idvlpllgts eppvqldlfq
      721 p
//
LOCUS       WP_235138202             513 aa            linear   BCT 02-MAR-2025
DEFINITION  SusD/RagB family nutrient-binding outer membrane lipoprotein
            [Dyadobacter fanqingshengii].
ACCESSION   WP_235138202
VERSION     WP_235138202.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 513)
  AUTHORS   Koropatkin,N., Martens,E.C., Gordon,J.I. and Smith,T.J.
  TITLE     Structure of a SusD homologue, BT1043, involved in mucin O-glycan
            utilization in a prominent human gut symbiont
  JOURNAL   Biochemistry 48 (7), 1532-1542 (2009)
   PUBMED   19191477
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024181.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12771.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..513
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /calculated_mol_wt=56750
     Region          34..481
                     /region_name="SusD-like_2"
                     /note="Starch-binding associating with outer membrane;
                     pfam12771"
                     /db_xref="CDD:463695"
ORIGIN      
        1 mkaiskylla avlslclitg cdegfddint nkvdptslap slilnkaiis ttyldgvstl
       61 gmltynfgiv qqiitpygss lsggnynqfn nantplvwvn fyrnvikqvv avtdqtkddp
      121 mqaniyhaar iwkayafmil tdtygdipyf eagqgyisev irpkydpqea iykdilkeld
      181 easgaldaaq pavttdilyg gnvakwkklg yslmlraamr ltkvdqttak tyvtkavagg
      241 lfesnadnsi irhtaiynny ianhlaarek tnfylaapfv nylkenndpr lavmavryvg
      301 akggpeqvaa rassdpklqi gmpmgyndvt intvlaqngv aslwdftqvn lttvlkldap
      361 efhityaqnq lllaeaavrg wvsgtaatyf angvrahleq malydpsaai kedviqaylk
      421 thpldaskal dqintqywva sfldgnelfa nfrrsgfpal kknpypgsei kedfirrmpy
      481 pdseiivnlq nvndantrqg pndlntrvww dkk
//
LOCUS       WP_235138203             451 aa            linear   BCT 02-MAR-2025
DEFINITION  enolase C-terminal domain-like protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235138203
VERSION     WP_235138203.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 451)
  AUTHORS   Thoden,J.B., Taylor Ringia,E.A., Garrett,J.B., Gerlt,J.A.,
            Holden,H.M. and Rayment,I.
  TITLE     Evolution of enzymatic activity in the enolase superfamily:
            structural studies of the promiscuous o-succinylbenzoate synthase
            from Amycolatopsis
  JOURNAL   Biochemistry 43 (19), 5716-5727 (2004)
   PUBMED   15134446
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024771.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13378.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..451
                     /product="enolase C-terminal domain-like protein"
                     /calculated_mol_wt=49802
     Region          53..451
                     /region_name="enolase_like"
                     /note="Enolase-superfamily, characterized by the presence
                     of an enolate anion intermediate which is generated by
                     abstraction of the alpha-proton of the carboxylate
                     substrate by an active site residue and is stabilized by
                     coordination to the essential Mg2+ ion; cl40480"
                     /db_xref="CDD:477366"
     Site            order(259,285,311)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:238188"
     Site            order(334,388)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:238188"
ORIGIN      
        1 mdhsnmnrre tmkalgltgs agilglfggt anakareeke tpnyatamkp vtiksvraia
       61 tapqgsnliv vkvetsepgl yglgcatftq raavvlvain tylnefcagk dvdniedmwh
      121 gayvssywrn gpvlnnalsg ldqalwdikg kragmplyql lggkvrfavp cythangntp
      181 eatvesvksi qergfkyiri qqggygavgs taeqpdfkke nfggptdsfm nensylkaip
      241 klfeavrksc geeiellhdi hervqpmnai nmikkleefn pffiedpfsp enqkwfkilr
      301 enttvpiamg elfnnvnefv epmvnqwfdf irihvsqigg vtpamkvarl gewfniktaw
      361 hgpgdvspvg hsahahidla vwnfgiqeav sfnektqevf sgcptmkngy msvnevpgig
      421 vdidekaaak ypittksnwq vrkfdgtlir p
//
LOCUS       WP_235138245             617 aa            linear   BCT 02-MAR-2025
DEFINITION  YfbK domain-containing protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235138245
VERSION     WP_235138245.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023459.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12034.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..617
                     /product="YfbK domain-containing protein"
                     /calculated_mol_wt=68183
     Region          24..110
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
     Region          147..461
                     /region_name="YfbK"
                     /note="Secreted protein containing bacterial Ig-like
                     domain and vWFA domain [General function prediction only];
                     COG2304"
                     /db_xref="CDD:441879"
     Region          423..607
                     /region_name="DUF3520"
                     /note="Domain of unknown function (DUF3520); pfam12034"
                     /db_xref="CDD:432277"
ORIGIN      
        1 mkskialllf faltaftllq nrkisgvvkd enqkplanvi vmvkntiisa ktdslgryti
       61 qvpdyaktli fsmphyaake vrlgtantln vtlaisridl tdalsesnqv hrkvsgsyvq
      121 mesaaqtfma pmprhqplet enynpineng fqfasqtpvt tfsvdvdras ysntrrflns
      181 gqmppvdavr ieeminyfdy nytepsgehp iavsgemtds pwnpglkllh iglqaktvpt
      241 knlpasnlvf lidvsgsmsd qnklpllkqa fkllvdqlrp qdkisivvya gaageilkpt
      301 sgsekmtike aldgleaggs taggagiela yklakdnfmk dgnnrvilat dgdfnvgiss
      361 egelqrliee krkegiflsi mgfgmgnykd shietladkg ngnyayidni qearkefvqe
      421 fggtlftiak dvkvqiefnp rhvqayrlig yenralknee fhddkkdage mgsghsvtal
      481 yeivpagans pylskndalk yqktdasdlg ktdemltlki rykkpdsdks ilfdmpiknt
      541 skpladcsen lrfasavaef glllrnsefk gkasyrevva raktafgkde egyrsefvql
      601 vktaetldnr ketaqkd
//
LOCUS       WP_235138309             393 aa            linear   BCT 02-MAR-2025
DEFINITION  fibronectin type III domain-containing protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235138309
VERSION     WP_235138309.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 393)
  AUTHORS   Little,E., Bork,P. and Doolittle,R.F.
  TITLE     Tracing the spread of fibronectin type III domains in bacterial
            glycohydrolases
  JOURNAL   J Mol Evol 39 (6), 631-643 (1994)
   PUBMED   7528812
REFERENCE   2  (residues 1 to 393)
  AUTHORS   Bazan,J.F.
  TITLE     Structural design and molecular evolution of a cytokine receptor
            superfamily
  JOURNAL   Proc Natl Acad Sci U S A 87 (18), 6934-6938 (1990)
   PUBMED   2169613
REFERENCE   3  (residues 1 to 393)
  AUTHORS   Kornblihtt,A.R., Umezawa,K., Vibe-Pedersen,K. and Baralle,F.E.
  TITLE     Primary structure of human fibronectin: differential splicing may
            generate at least 10 polypeptides from a single gene
  JOURNAL   EMBO J 4 (7), 1755-1759 (1985)
   PUBMED   2992939
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012271.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00041.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..393
                     /product="fibronectin type III domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=42380
     Region          32..120
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(32,93,108)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          <95..>301
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Site            order(109..110,112..113)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          326..390
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mkfiytkafs frsifiiill lcqlvakavv ipkapsalsa taisatqinl awvdnaldet
       61 gfelersvdg lkfvkiadlg vniktfsntg lpastkywyr ilakntagks aysniatatt
      121 fliapnapan lvavsvstvq invswednal nesgfqlers lngtvftkia dlgpniesyq
      181 ntglipatqy yyrlravnaa gasaysnvgs attdnipvpa mpenftavpi apdvvqlrws
      241 avsanarevi ierskgvttq fvqigkvaan vlqfqdkdsl astdyfyrik avnaggsspy
      301 slisivlans iitgneplps gpiiytfqkt lfialsrtas aqlqlynvng akqletriga
      361 sfqvnlahla mgiyivrilt dkevisrriv lfd
//
LOCUS       WP_235138313             273 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF481 domain-containing protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235138313
VERSION     WP_235138313.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016241.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04338.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..273
                     /product="DUF481 domain-containing protein"
                     /calculated_mol_wt=30535
     Region          67..271
                     /region_name="DUF481"
                     /note="Protein of unknown function, DUF481; pfam04338"
                     /db_xref="CDD:427876"
ORIGIN      
        1 mivglnfskl tasflficst lahaqqpssn spqavpldsv lavkpdsavk pppplfdtir
       61 yrfigdgnfa rgnvnrslvv lraeltfsgp ainvatnprf tygkqsgila erdsyidlfv
      121 dvfkkrktya fglgvletsn lrrinlrqma gagvgyrlir tksnemsltn ailyestnfq
      181 eistvttirn sfrvkgkhsl lqdkfrinhl tflqpalndf snlrwntils felplnkwvt
      241 lrtsfensye svveatrkrn dtritfgvsv gnk
//
LOCUS       WP_235138372             510 aa            linear   BCT 02-MAR-2025
DEFINITION  tail fiber domain-containing protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235138372
VERSION     WP_235138372.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 510)
  AUTHORS   Schwarzer,D., Stummeyer,K., Gerardy-Schahn,R. and Muhlenhoff,M.
  TITLE     Characterization of a novel intramolecular chaperone domain
            conserved in endosialidases and other bacteriophage tail spike and
            fiber proteins
  JOURNAL   J Biol Chem 282 (5), 2821-2831 (2007)
   PUBMED   17158460
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025253.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13884.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..510
                     /product="tail fiber domain-containing protein"
                     /calculated_mol_wt=55373
     Region          <191..266
                     /region_name="LbR-like"
                     /note="Left-handed beta-roll, including virulence factors
                     and various other proteins; cl17507"
                     /db_xref="CDD:248061"
     Region          385..437
                     /region_name="Peptidase_S74"
                     /note="Chaperone of endosialidase; pfam13884"
                     /db_xref="CDD:404724"
ORIGIN      
        1 mksktlqlhm rtnnplsdfr tliiaiilll lcllakaqap qqfsfqgvar daagkviank
       61 tisiqalink ntpsgenvfy qqldniqtds hgifniaigs nfsnvdwksd kfflnillnl
      121 gdgnfvdigt tqllsvpyal yssesgrwks ddpiiqigti nsgkllpnvg sgsrliwypr
      181 mgafrvgthd gqweeakvgl rsfatgente avsqhsvamg ketkangsas falgtqttaq
      241 gerslalgnn vvakassgia lgafnnlsdd pigisqaddr ifqigngvga dsrsnvmtil
      301 rngniglgns vlnpqylldi ggrarithng netagiyfda sqnaaegfvg mktnneigly
      361 intawrfwvn nqgngylngn liqtsdrrlk tniqpfknsl gkvnslqgyh ynwedktrdq
      421 tmqtgliaqe veqifpelvs tnkdgfksvn yiglvphlve svkelksktd eiavlrkele
      481 giremgkrle lleaslnkga gvaeiktaak
//
LOCUS       WP_235138373             237 aa            linear   BCT 02-MAR-2025
DEFINITION  T9SS type A sorting domain-containing protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235138373
VERSION     WP_235138373.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 237)
  AUTHORS   Veith,P.D., Nor Muhammad,N.A., Dashper,S.G., Likic,V.A.,
            Gorasia,D.G., Chen,D., Byrne,S.J., Catmull,D.V. and Reynolds,E.C.
  TITLE     Protein substrates of a novel secretion system are numerous in the
            Bacteroidetes phylum and have in common a cleavable C-terminal
            secretion signal, extensive post-translational modification, and
            cell-surface attachment
  JOURNAL   J Proteome Res 12 (10), 4449-4461 (2013)
   PUBMED   24007199
REFERENCE   2  (residues 1 to 237)
  AUTHORS   Glew,M.D., Veith,P.D., Peng,B., Chen,Y.Y., Gorasia,D.G., Yang,Q.,
            Slakeski,N., Chen,D., Moore,C., Crawford,S. and Reynolds,E.C.
  TITLE     PG0026 is the C-terminal signal peptidase of a novel secretion
            system of Porphyromonas gingivalis
  JOURNAL   J Biol Chem 287 (29), 24605-24617 (2012)
   PUBMED   22593568
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039201.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18962.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..237
                     /product="T9SS type A sorting domain-containing protein"
                     /GO_component="GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /calculated_mol_wt=25649
     Region          162..234
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     cl46851"
                     /db_xref="CDD:481191"
ORIGIN      
        1 mkrflmiigf ccsaywagaq sispsgiyga sntstgggvs vswvlgsltp eamsalpvkl
       61 idfkcaltda atvsltwsts eetssdyfqi qystngkhwa gigqvkange snavktyafe
      121 hsnpatgenl yrlkmvdqdg tyaysrvrnv vfeaisglsf hpnpvsdwlt vdakdwvsmk
      181 elkitnaaga tvgafrdeql qklpgkainf rdfpsgiyii sitrkdgsvh sekifkn
//
LOCUS       WP_235138388             347 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-ketoacyl synthase chain length factor [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235138388
VERSION     WP_235138388.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13723.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..347
                     /product="beta-ketoacyl synthase chain length factor"
                     /calculated_mol_wt=38117
     Region          2..>210
                     /region_name="cond_enzymes"
                     /note="Condensing enzymes; Family of enzymes that catalyze
                     a (decarboxylating or non-decarboxylating) Claisen-like
                     condensation reaction. Members are share strong structural
                     similarity, and are involved in the synthesis and
                     degradation of fatty acids, and the...; cl09938"
                     /db_xref="CDD:447866"
ORIGIN      
        1 myitdsacis pqrtfdnafl egeitvhygn rynaiepgyg tlipagllrr mgkavrmgvg
       61 aglpliqkfd mdgiilgtan ggledclkfl nqivdydegt ltptnfvqst pnavagnlal
      121 mskvtgyntt hvhkglafea alldammlle erefkrvlvg svdeisdynh nidflnghfk
      181 ieelssenll ssdspgsvng egatmfvves srsestlahi kdvdqmnsps edelemkldh
      241 fltkngltrk dvdtlilgvs gdnrtdhlyk dfqnkffpds sgytyknmvg dyptasafat
      301 wmavqmlsgh paplpcihnn ptaqkannvl iynhfkemqh sfillta
//
LOCUS       WP_235138171             433 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleoside hydrolase-like domain-containing protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235138171
VERSION     WP_235138171.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 433)
  AUTHORS   Hehemann,J.H., Marsters,C. and Boraston,A.B.
  TITLE     Ab initio phasing of a nucleoside hydrolase-related hypothetical
            protein from Saccharophagus degradans that is associated with
            carbohydrate metabolism
  JOURNAL   Proteins 79 (10), 2992-2998 (2011)
   PUBMED   21905122
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019260.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07632.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..433
                     /product="nucleoside hydrolase-like domain-containing
                     protein"
                     /calculated_mol_wt=48674
     Region          37..279
                     /region_name="DUF1593"
                     /note="Protein of unknown function (DUF1593); pfam07632"
                     /db_xref="CDD:462219"
     Region          299..361
                     /region_name="DUF5060"
                     /note="Domain of unknown function (DUF5060); pfam16586"
                     /db_xref="CDD:435443"
ORIGIN      
        1 mvistvmegk lkhlgslfia illalgsfaa haqqktrifi stdiggtdpd dfqsmihllm
       61 yadlfqiegl vstsfqtgrk kdildmidly ekdlpklkkh ssgfpepvsl rnvckqgata
      121 wapyagfrks tegsewlisc akksvdqplw vlvwggiedv aqalhdapei kdkirvywig
      181 gpnkkwgvna ydyiaqnhpd lwmiecnaty rgwfmdpesp kditaesfyp nyikgrgemg
      241 kdfiryykgn ikmgdtpsla yvmhgkpenp sgeswggtft pitrssktif nrnsttadtv
      301 atygviewrf ngpkinvsad stvfslstgg qqwsgyyigd gkyavryspk qveigeyiti
      361 spiaelngqk gkyvstapwp gkpepndykl gkhwygdlpn pelflgqqqg aktvakhrke
      421 flmdwakrwr wle
//
LOCUS       WP_235138399              85 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235138399
VERSION     WP_235138399.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..85
                     /product="phosphopantetheine-binding protein"
                     /calculated_mol_wt=9341
     Region          1..80
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; cl09936"
                     /db_xref="CDD:447865"
ORIGIN      
        1 mdnlkedlkn qiieqlnled itpadiadda llfdggglgl dsidaleliv llekyhgiqv
       61 vnpeegkvaf ksidtmaeyi rkrks
//
LOCUS       WP_235138427             139 aa            linear   BCT 02-MAR-2025
DEFINITION  plasmid mobilization protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235138427
VERSION     WP_235138427.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 139)
  AUTHORS   Rehman,S., Li,Y.G., Schmitt,A., Lassinantti,L., Christie,P.J. and
            Berntsson,R.P.
  TITLE     Enterococcal PcfF Is a Ribbon-Helix-Helix Protein That Recruits the
            Relaxase PcfG Through Binding and Bending of the oriT Sequence
  JOURNAL   Front Microbiol 10, 958 (2019)
   PUBMED   31134011
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046164.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21983.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..139
                     /product="plasmid mobilization protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=16370
     Region          22..>97
                     /region_name="MobC_2"
                     /note="MobC-like protein; cl44929"
                     /db_xref="CDD:479920"
ORIGIN      
        1 mskrendnvm kkdksnrtkw lnirltpeef qqlirkvqrt tcrktseyar kvllsepviv
       61 nhrnqsfdev mieltrlrre lstagsnlnq avkrlhalsq iadfrswled yeadkdhlie
      121 lvneiniyis kaskiwlqs
//
LOCUS       WP_235138404             384 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2062 domain-containing protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235138404
VERSION     WP_235138404.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021363.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09835.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..384
                     /product="DUF2062 domain-containing protein"
                     /calculated_mol_wt=43003
     Region          10..187
                     /region_name="DPM_DPG-synthase_like"
                     /note="DPM_DPG-synthase_like is a member of the
                     Glycosyltransferase 2 superfamily; cd04179"
                     /db_xref="CDD:133022"
     Site            order(13,15,95)
                     /site_type="active"
                     /note="Ligand binding site [active]"
                     /db_xref="CDD:133022"
     Site            order(42,94..95)
                     /site_type="active"
                     /note="Putative Catalytic site [active]"
                     /db_xref="CDD:133022"
     Site            93..95
                     /site_type="active"
                     /note="DXD motif [active]"
                     /db_xref="CDD:133022"
     Region          <267..384
                     /region_name="COG3216"
                     /note="Uncharacterized conserved protein, DUF2062 family
                     [Function unknown]"
                     /db_xref="CDD:442449"
ORIGIN      
        1 mtlkdinccv ivptynnikt idrileslll fsgdqdiiav ndgstdrtpy qlmkygsrlt
       61 vidyilntgk ghalragfkq aiamgyanai tidsdgqhqv sdipifleaa aknpgavimg
      121 srdmeqegvp gkssfgnkfs nfwfkvetgi slpdtqtgfr lyplaeiakm klyttkfete
      181 ievlvrlawr nvpiipvkin viydkeervt hfrpfkdfar isvlntvlvv ltllyflpkr
      241 ligkvkkkgl wkiikeeavk peesnlskak sigfgffmgi vpvwgfqlli giplsiyfrm
      301 nkvlflaaan isippfipii iygsykfggl fyrngvqlts fenltlssih vnfvqyfigg
      361 sllamaaglv gfmitylflv ifrr
//
LOCUS       WP_235138432              82 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235138432
VERSION     WP_235138432.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 82)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 82)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 82)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 82)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..82
                     /product="ATP-binding protein"
                     /calculated_mol_wt=8766
     Region          <2..82
                     /region_name="COG4251"
                     /note="Bacteriophytochrome (light-regulated signal
                     transduction histidine kinase) [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443393"
ORIGIN      
        1 mivvriaaeg nhtilsvqdn gmgiekrhld tifnkyarlq tdgegygigl yltskivnas
       61 ggritvesep gngskfmisl nk
//
LOCUS       WP_235138434             141 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Dyadobacter fanqingshengii].
ACCESSION   WP_235138434
VERSION     WP_235138434.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..141
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=16191
     Region          18..131
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(107..110,112)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 mnrngeiiii eddeddhfll eevftilnyp nkrvyfhdgf salehlhdps tvpflvlsdi
       61 nmpqidgfel reklkndadi hlkcipylff stamsqqmvi daysmsvqgf fikpgsipel
      121 tdtikaiiey wkkcasptnf q
//
LOCUS       WP_235138449             330 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235138449
VERSION     WP_235138449.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020251.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08667.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..330
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=38255
     Region          28..>72
                     /region_name="HTH_XRE"
                     /note="Helix-turn-helix XRE-family like proteins.
                     Prokaryotic DNA binding proteins belonging to the
                     xenobiotic response element family of transcriptional
                     regulators; cl22854"
                     /db_xref="CDD:473980"
ORIGIN      
        1 mnaeqiqlsl fqeirakvpr hisladsiae ileisadsay rrirgekpvt leelqklssh
       61 fnlsvdrlln lsnkafvfqg hlmddndydi anwllnlsqi vqfvklqpnh hiyylakdvp
      121 fvyplqfpal asfkdffrrr slmspnetrg qkfsvkdvnp afeetaativ riyntipste
      181 iwssesfnsi ikqiqfyqyt sqfasqrdah alyeivevmi dhlehqaeig irytygekpd
      241 kqavgynlyn nelfigedti lvdlgetkmt flnhsfinym ttvdetfcny tfkalkniis
      301 rstlvswage kdrkiffngl rkkleqawsk
//
LOCUS       WP_235138450             334 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235138450
VERSION     WP_235138450.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020251.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08667.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..334
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=38512
     Region          31..>78
                     /region_name="HTH_XRE"
                     /note="Helix-turn-helix XRE-family like proteins.
                     Prokaryotic DNA binding proteins belonging to the
                     xenobiotic response element family of transcriptional
                     regulators; cl22854"
                     /db_xref="CDD:473980"
ORIGIN      
        1 mieldkpsvq seffnqiran lpsnitlvda vadflgisnd sayrrirgdt pisfdeigkl
       61 skhfkvsidk llnlkadsyi fsgklantqd hildkwlanv lsqfefmcny pncrlfylak
      121 dvpiahffqt pelaafkfff wqksilqyde mrgirfeigq idaacrqlsq liietynkid
      181 tveiwnaesi nstirqiefy rasdmfyskt eldllwdile dlvnhlerqa eygvkfafgg
      241 tpesglapys mynnelilgn ntvladfgsf kltylnhsvi nyistqdtrf ndymfagvqn
      301 mirkseqlnn vnekgrlsff nrlrskiaka rraa
//
LOCUS       WP_235138488             873 aa            linear   BCT 02-MAR-2025
DEFINITION  GH39 family glycosyl hydrolase [Dyadobacter fanqingshengii].
ACCESSION   WP_235138488
VERSION     WP_235138488.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013400.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01229.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..873
                     /product="GH39 family glycosyl hydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=96967
     Region          265..421
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
     Region          493..>657
                     /region_name="XynB"
                     /note="Beta-xylosidase [Carbohydrate transport and
                     metabolism]; COG3664"
                     /db_xref="CDD:442881"
ORIGIN      
        1 mkcsyiklli mmamvpmani sdsraqtsdl kagngvvkia sgriihrffd tspispsgky
       61 malfhmpyed htpapgdage vvlvdlqsgv ervvatsrgw emqlgaqvqw gasdqelyfn
      121 dvdisswkaf avklnpltgv srrldgtvfm vsrdgkklas hnliksryaq igygviipke
      181 kavrnvgipk ddgvfitdtd sgkskllvsi rdiyeksaps iaisnpqdfe yycfqvkwnp
      241 qgtrllttvq wspvgggark ravitmkadg sdlktaitpd qwakgghhvn wmpdgdhism
      301 nlelggktgl elitarydga dlktvfqpgs ghpsyhpkgl plivtdaypg dmvtagdgtv
      361 pirllntetg veqklasifl skaegefrid ahpawdntgk yvvfngladg trsvfmasvt
      421 gseptplypw kvlgqlktrd akqigkssws iggetldrdy tdyqsyktyl gplgakrirl
      481 qggwskceki kgvydfkwld avipdaasrg vfpwvelsyg npiyegggda rlaghiptsp
      541 ealqawdnwv raivtrykeq vpeweiwnep dlnpthtgre igafylrtar ivksvqpkak
      601 lialgmasvt rldfmkefmd hlkendglqy idlltyhgya ynpdesypki eklrelvwry
      661 kpsivfmqge ngapstpkev tigalrdqdw teltqakwdl rrmlgdhgrg iatnlftisd
      721 ihyapgdhmv gvntkgilkt npdktierpk maykaaqhvf slfddqlelq pghpevnqen
      781 lyafqykskk ggnlltlwsg earpaenyna rmaditvtge fkepvladli sgkiyavpke
      841 rifkkgnqtt fknipvpdyp vvladrsvia vqe
//
LOCUS       WP_235138490             497 aa            linear   BCT 02-MAR-2025
DEFINITION  GH39 family glycosyl hydrolase [Dyadobacter fanqingshengii].
ACCESSION   WP_235138490
VERSION     WP_235138490.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013400.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01229.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..497
                     /product="GH39 family glycosyl hydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=55880
     Region          90..>267
                     /region_name="XynB"
                     /note="Beta-xylosidase [Carbohydrate transport and
                     metabolism]; COG3664"
                     /db_xref="CDD:442881"
ORIGIN      
        1 mkylkiisaf flvsictqan tlraqdqpvg aqipfkkvge iktkstseii ssnwilgcet
       61 ldrdmadyeq ykeyiaplgi krlrmqagwa ktervkgqyd wawldkiidd aasrgfqpwl
      121 etsygnpvya gggginlsag ipsseealka wdkwvaalvt rykdkvkdwe vwnepnfgdn
      181 einapekvad lnirtaeiik riqpgarisg lamghidlky advffkyiht kgkmslfdnm
      241 tyhdyvynpd snyghvgelr rvldkyapqv klrqgengsp sfsgggrgal gdydwtelsq
      301 akwntrrmlg dlghdiessi lgiidmnyav tagpikklnv kgliesdssk rairpkmayy
      361 amqhiaaifd dtlvrlknln qtfnsnakta vgeirfskst drsisvygye hattrkqift
      421 iwsdeaipvn tnqlrnitft fvnaeitkpv yvdvitgsiy eipqsqwske gnkmtfsnip
      481 vydapiliad aslihik
//
LOCUS       WP_235138571             126 aa            linear   BCT 02-MAR-2025
DEFINITION  tautomerase family protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235138571
VERSION     WP_235138571.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025903.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14552.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..126
                     /product="tautomerase family protein"
                     /calculated_mol_wt=14015
     Region          2..51
                     /region_name="4Oxalocrotonate_Tautomerase"
                     /note="4-Oxalocrotonate Tautomerase: Catalyzes the
                     isomerization of unsaturated ketones. The structure is a
                     homohexamer that is arranged as a trimer of dimers. The
                     hexamer contains six active sites, each formed by residues
                     from three monomers, two from one...; cl00235"
                     /db_xref="CDD:444774"
     Region          37..119
                     /region_name="4Oxalocrotonate_Tautomerase"
                     /note="4-Oxalocrotonate Tautomerase: Catalyzes the
                     isomerization of unsaturated ketones. The structure is a
                     homohexamer that is arranged as a trimer of dimers. The
                     hexamer contains six active sites, each formed by residues
                     from three monomers, two from one...; cl00235"
                     /db_xref="CDD:444774"
ORIGIN      
        1 mplvtitlvk grstpekhli adkvhaalvn tgvpgddrfq rmielepenf iynrnfpelh
       61 qartpafili eivwsagrsv kikrkllgdl mgglkaagqd pndvmvafie tawenwafan
      121 geqihi
//
LOCUS       WP_235138577             224 aa            linear   BCT 02-MAR-2025
DEFINITION  outer membrane beta-barrel protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235138577
VERSION     WP_235138577.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024895.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13505.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..224
                     /product="outer membrane beta-barrel protein"
                     /calculated_mol_wt=24806
     Region          19..179
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mkklpflavl iliinlsana qqfkkfgagv yggsqlfgkm ysnddlskis gftagvdlry
       61 sfskqpegfs lhfqpgfntf rqitesgdns qvemetiwkw rafhlpvllr ytfssgkvrp
      121 faeigpmlrf rqalkvntsn nicgiagcyf qetnsdlhpl ttkdaiglta gagvevdlwk
      181 vtipvsiriq egfgtyetnv tfyesagyqn lktrviqata ginf
//
LOCUS       WP_235138632             613 aa            linear   BCT 02-MAR-2025
DEFINITION  alkaline phosphatase [Dyadobacter fanqingshengii].
ACCESSION   WP_235138632
VERSION     WP_235138632.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012470.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00245.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..613
                     /product="alkaline phosphatase"
                     /EC_number="3.1.3.1"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=66882
     Region          26..242
                     /region_name="PI-PLCc_GDPD_SF_unchar3"
                     /note="Uncharacterized hypothetical proteins similar to
                     the catalytic domains of Phosphoinositide-specific
                     phospholipaseand Glycerophosphodiester phosphodiesterases;
                     cd08577"
                     /db_xref="CDD:176519"
     Site            order(31,52,54,107,143,219)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176519"
     Site            order(31,66)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176519"
     Region          270..602
                     /region_name="PhoA"
                     /note="Alkaline phosphatase [Inorganic ion transport and
                     metabolism, General function prediction only]; COG1785"
                     /db_xref="CDD:441391"
ORIGIN      
        1 mkrllflicc vaalpvlgqq vnapfpqghs hndylqpapf alayheqfgs ieadvflind
       61 tlfvahdktq inrartfdkl ylqpiletaa knegrvyrdq slqllvdlkt qgdpallals
      121 kllapyeavf gkkgsvkvvv sgnvpapetf drypsfiffd grpgvkytpe qlnriglisq
      181 nfgslskwng kgipveedri kliaavkgah dqqkpfrfwa spdninawkq lvnlgadyin
      241 tdkvaalgaf lngrakaefr aqsfhevykp tylnndskgt vkniilligd gmglaqihag
      301 itgnagklnl tqflnigfsk tassdnyitd saagatafat gkktrnraig vdsnlvpaks
      361 iikdfqaagk kvalissgdi tdatpasfya hrpersmqds iakdylsnwv diaigggmeh
      421 fqltgvskql avkgvnvsek wgdlsglktp fllldphnak siqngrgsfl sdsfkktiqe
      481 fkthkpgffm maegaqidyg ghanivsytv lemldfdklv gealrfadsn gqtlvivtad
      541 hetggltlld gnlktgyvdg hfstddhtgv mvpvfaygph sldfrgvyen teiynkiral
      601 igrfnnsitt plh
//
LOCUS       WP_235138668             410 aa            linear   BCT 02-MAR-2025
DEFINITION  enolase C-terminal domain-like protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235138668
VERSION     WP_235138668.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 410)
  AUTHORS   Thoden,J.B., Taylor Ringia,E.A., Garrett,J.B., Gerlt,J.A.,
            Holden,H.M. and Rayment,I.
  TITLE     Evolution of enzymatic activity in the enolase superfamily:
            structural studies of the promiscuous o-succinylbenzoate synthase
            from Amycolatopsis
  JOURNAL   Biochemistry 43 (19), 5716-5727 (2004)
   PUBMED   15134446
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024771.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13378.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..410
                     /product="enolase C-terminal domain-like protein"
                     /calculated_mol_wt=45619
     Region          2..405
                     /region_name="enolase_like"
                     /note="Enolase-superfamily, characterized by the presence
                     of an enolate anion intermediate which is generated by
                     abstraction of the alpha-proton of the carboxylate
                     substrate by an active site residue and is stabilized by
                     coordination to the essential Mg2+ ion; cl40480"
                     /db_xref="CDD:477366"
     Site            order(243,269,296)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:238188"
     Site            order(319,373)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:238188"
ORIGIN      
        1 miykiavqda ryqldgsags daihrdpiys yavtqlidds gitgtgfaft lgegndlvck
       61 aaqyyaqklv gkdieemmad fgtlfrqlad dqqfrwlgph kgvvhlalas vtnacydlwa
      121 kkrgvplwkl ltdlspeaii ntldfsyled eltkeqalil ltqeqagkvs resilqtgyp
      181 gydtsigwfn ysdekvrenc kkalaegfta mklkvgsvdp erdirrahiv revagesvkv
      241 mldanqqwnl pnaiticrql atmnpywiee pthpddvlah qtlarqiapv klalgehvpn
      301 kvifknylqa nsaafiqvda vrvggvsefl tisllckkfg ipvvphvgdm gqlhqhlvly
      361 nhiamgheal flehiphlqk hfvhpacirn gvyetpqepg sscdlialrn
//
LOCUS       WP_235138695             889 aa            linear   BCT 02-MAR-2025
DEFINITION  sialate O-acetylesterase [Dyadobacter fanqingshengii].
ACCESSION   WP_235138695
VERSION     WP_235138695.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 889)
  AUTHORS   Surolia,I., Pirnie,S.P., Chellappa,V., Taylor,K.N., Cariappa,A.,
            Moya,J., Liu,H., Bell,D.W., Driscoll,D.R., Diederichs,S.,
            Haider,K., Netravali,I., Le,S., Elia,R., Dow,E., Lee,A.,
            Freudenberg,J., De Jager,P.L., Chretien,Y., Varki,A.,
            MacDonald,M.E., Gillis,T., Behrens,T.W., Bloch,D., Collier,D.,
            Korzenik,J., Podolsky,D.K., Hafler,D., Murali,M., Sands,B.,
            Stone,J.H., Gregersen,P.K. and Pillai,S.
  TITLE     Functionally defective germline variants of sialic acid
            acetylesterase in autoimmunity
  JOURNAL   Nature 466 (7303), 243-247 (2010)
   PUBMED   20555325
REFERENCE   2  (residues 1 to 889)
  AUTHORS   Bitto,E., Bingman,C.A., McCoy,J.G., Allard,S.T., Wesenberg,G.E. and
            Phillips,G.N. Jr.
  TITLE     The structure at 1.6 Angstroms resolution of the protein product of
            the At4g34215 gene from Arabidopsis thaliana
  JOURNAL   Acta Crystallogr D Biol Crystallogr 61 (Pt 12), 1655-1661 (2005)
   PUBMED   16301800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015585.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03629.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..889
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..889
                     /product="sialate O-acetylesterase"
                     /calculated_mol_wt=100269
     Region          <36..>76
                     /region_name="Ca_tandemer"
                     /note="Ca2+-stabilized adhesin repeat; NF033510"
                     /db_xref="CDD:411149"
     Region          248..>371
                     /region_name="LacZ"
                     /note="Beta-galactosidase/beta-glucuronidase [Carbohydrate
                     transport and metabolism]; COG3250"
                     /db_xref="CDD:442481"
     Region          <411..528
                     /region_name="SASA"
                     /note="Carbohydrate esterase, sialic acid-specific
                     acetylesterase; pfam03629"
                     /db_xref="CDD:427409"
     Region          657..867
                     /region_name="CE4_GLA_like_6s"
                     /note="Putative catalytic NodB homology domain of gellan
                     lyase and similar proteins; cd10967"
                     /db_xref="CDD:200589"
     Site            order(664..665,716,720,771..773,843)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:200589"
ORIGIN      
        1 mrsvpfllll iffsgytvgq vrlprliadn mvlqrdqpit iwgwaapkek vtvtfknksr
       61 svvtgadgkw tiqlpaqtag sgyemilkgk nqirlkniaf gdvwlcngqs nmvinmervk
      121 erfpddiasa sypdirnffi qtltdlnapq adfpngewkm anskdvlsfg avayffardl
      181 hdqykvpigi inssvggtpi eawisedgyr dfadiqkvin qnkdtayvqa rkqnnlnnap
      241 kppkstdfgq sehweseeyq pkgwrnfnip gywedqglkn ldgvvwfrre fevpeswigk
      301 pvklymgriv dadqmfvngk signvtyqyp prryeipagl lkagkntfai rvtntagkgg
      361 fvpdkpyfmt andqqidlkg twqykvgqvf ptmkiadpnn ipfaaqnqpa slynamiapv
      421 lpmklkgflw yqgesnvdep daynvllpal indrrrlwnd enlpfllvql pnfqdidftp
      481 aesnmallre aqnqaltlkn tavivtldlg ewndihplnk kdigkrlals arnlaygekn
      541 ivhsgptlks qsirgnkill tfdnvadgik smdgealrwf smadddqkfv wanakivgkd
      601 qielssesvk tpkymryawq dnpeginfys sanlpaspfr tdgeqldetk pwkgkkcavv
      661 ltyddalnvh ldnavpalds lslkgsfylt assdaarnri kdwraaaang helgnhtvyh
      721 pcdatrpgms wvkpeydlsk yslariqdei kmcnaflksi dgqskrtfaf tcghkkvaeg
      781 efiqtlsdef iaaravrhem hsideqnlmd idcyamsget gedlielvkq aqqrgkllvf
      841 lfhgvggeha lnvsneahsk llhylkehek diyidtmrnv aehiqnvkk
//
LOCUS       WP_235138732             129 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3244 domain-containing protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235138732
VERSION     WP_235138732.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 129)
  AUTHORS   Faralla,C., Bastounis,E.E., Ortega,F.E., Light,S.H., Rizzuto,G.,
            Gao,L., Marciano,D.K., Nocadello,S., Anderson,W.F., Robbins,J.R.,
            Theriot,J.A. and Bakardjiev,A.I.
  TITLE     Listeria monocytogenes InlP interacts with afadin and facilitates
            basement membrane crossing
  JOURNAL   PLoS Pathog 14 (5), e1007094 (2018)
   PUBMED   29847585
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023021.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11589.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..129
                     /product="DUF3244 domain-containing protein"
                     /calculated_mol_wt=14867
ORIGIN      
        1 mktilkvfac yfflqsaaha ktsddvdnks aksfesviyp lkdgrlrini tnarlermvv
       61 imkneegvii qknfidkkce kagitydvsn lergkykiyi rnkkdaeikd fnieevkaqh
      121 rfitmnvvd
//
LOCUS       WP_235138733            1026 aa            linear   BCT 02-MAR-2025
DEFINITION  PA14 domain-containing protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235138733
VERSION     WP_235138733.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 1026)
  AUTHORS   Rigden,D.J., Mello,L.V. and Galperin,M.Y.
  TITLE     The PA14 domain, a conserved all-beta domain in bacterial toxins,
            enzymes, adhesins and signaling molecules
  JOURNAL   Trends Biochem Sci 29 (7), 335-339 (2004)
   PUBMED   15236739
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07691.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..1026
                     /product="PA14 domain-containing protein"
                     /calculated_mol_wt=112350
     Region          272..357
                     /region_name="CytC552"
                     /note="Cytochrome c551/c552 [Energy production and
                     conversion]; COG4654"
                     /db_xref="CDD:443692"
     Region          429..546
                     /region_name="PA14"
                     /note="domain in bacterial beta-glucosidases other
                     glycosidases, glycosyltransferases, proteases, amidases,
                     yeast adhesins, and bacterial toxins; smart00758"
                     /db_xref="CDD:214807"
     Region          573..884
                     /region_name="YliI"
                     /note="Glucose/arabinose dehydrogenase, beta-propeller
                     fold [Carbohydrate transport and metabolism]; COG2133"
                     /db_xref="CDD:441736"
ORIGIN      
        1 mkfrkfmvgp rlvgprlavl saaiivavlg sayrgsastf ylkpgtspgf sdvkrpreaw
       61 vlrsvldarp rilsialhdn lwlayntkta slykawagki nfsgpvytss hgpqpvsegt
      121 tymeepdenp writadskev tpeisykght ildnqvtlky eldyqgkkis veekpeffda
      181 gngkagferv ftvsnapadi llsvnvhlns lsvdtdyktn gkflgvkske kagnqsfiam
      241 ngklilnnng ktnfsvnltk kpaqpqtalq eskadmvagl faksdcntch nqevktvgpa
      301 ykaiakryen ndknknalvt kvikggagnw gqiamsphpd lkkedaetmv syileldadk
      361 eraqaasklm pkpaypiilk sivpakvata seqpglarpg larpgiarpg iavniyqfas
      421 giggvpeind emlpvksgsi nalhlddqdf gdlkdnfaiy asgyinikkt tnivfrlvcd
      481 dggklfiddk lvidngvnha lqptdgeiil kpgrhpfkve yyqgafgkgl slqwrpygsk
      541 efvvvppsif tykgadikrt gqtpvdvtke dipgdrsplv avhpsftlaq arpdnfqprv
      601 ggmdfladgr mvvstwdslg svyivdgrka atpndikvkr iayglaeplg lkvvddeiyi
      661 mqkqeltklv dlnndelide yqticngwkv sanfhefafg lvykdgyfyg tlatainpgg
      721 astkpqipdr gkvvkiskkd gsftfvasgl rtpngiglgv dneifiadnq gdwlpankii
      781 hlqegawygs rsvdfegtan rketppvvwl tqdeignsps qparlnvgpy qnqmihgdvt
      841 hggikrvfae kvngayqgav frftqgleag vnrlawspdg slylggvgst gnwghagkfg
      901 yglqkltfnn kvafemlavr aksdgleief tepmkegvge taadyeirqw wfkptgdygg
      961 pkldeenlav kavkvsadrk kvslqltgmk pkhmvyihln rknitsqngs nlwsteawyn
     1021 mneipk
//
LOCUS       WP_235138752             223 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6766 family protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235138752
VERSION     WP_235138752.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042831.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20554.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..223
                     /product="DUF6766 family protein"
                     /calculated_mol_wt=25158
     Region          8..223
                     /region_name="DUF6766"
                     /note="Domain of unknown function (DUF6766); pfam20554"
                     /db_xref="CDD:466703"
ORIGIN      
        1 mststkqhsf lyrnglgllf salfvvtlia qaftgfhkhn selaqdhapq isfvaylntg
       61 hfisatfenf eseflqmaly viltvglrqk gsaeskslde peevdrepqp gpdapwpvrk
      121 ggiilklyen slftvfailf liswwlhlyg swldhneqqv lngqptdtma nyltqanfwf
      181 etfqnwqsef lsiasivllt iflrqkgspe skpvdaphsk tgk
//
LOCUS       WP_235138814             744 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Dyadobacter fanqingshengii].
ACCESSION   WP_235138814
VERSION     WP_235138814.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 744)
  AUTHORS   Tavladoraki,P., Schinina,M.E., Cecconi,F., Di Agostino,S.,
            Manera,F., Rea,G., Mariottini,P., Federico,R. and Angelini,R.
  TITLE     Maize polyamine oxidase: primary structure from protein and cDNA
            sequencing
  JOURNAL   FEBS Lett 426 (1), 62-66 (1998)
   PUBMED   9598979
REFERENCE   2  (residues 1 to 744)
  AUTHORS   Tsugeno,Y. and Ito,A.
  TITLE     A key amino acid responsible for substrate selectivity of monoamine
            oxidase A and B
  JOURNAL   J Biol Chem 272 (22), 14033-14036 (1997)
   PUBMED   9162023
REFERENCE   3  (residues 1 to 744)
  AUTHORS   Schilling,B. and Lerch,K.
  TITLE     Cloning, sequencing and heterologous expression of the monoamine
            oxidase gene from Aspergillus niger
  JOURNAL   Mol Gen Genet 247 (4), 430-438 (1995)
   PUBMED   7770050
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..744
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=85062
     Region          6..>97
                     /region_name="COG3349"
                     /note="Uncharacterized protein, contains NAD-binding
                     domain and a Fe-S cluster [General function prediction
                     only]"
                     /db_xref="CDD:442577"
     Region          <679..731
                     /region_name="COG3349"
                     /note="Uncharacterized protein, contains NAD-binding
                     domain and a Fe-S cluster [General function prediction
                     only]"
                     /db_xref="CDD:442577"
ORIGIN      
        1 metkkkkiai lgggmaslsa aheltdyegw qdqyeitlyq tgwrlggkta tgrgecdrie
       61 ehgihilqgw ydttfrllrd vyaerkqhnl apgsplqdlf kdglvannst lltefvpelg
      121 kwtnwplvlp eteeqpgage plpmwalvrk glsvmaemll gspysstgsw fsrwvlnhff
      181 pkfvdgveqk rqekkgflhw llkplfseng ffgrlikrem shiseaikll aqesgdnhkh
      241 hsfilnller eirhierqgl pyredqqekr hqaiavcfay ynikgilkdv ydrkteifdf
      301 dkidkydyre wlamqgapqw lvdsvivrff ytgtfanlvn enggavaagt alqffakssg
      361 ykgsfvyqmv ygtgdvmvmp iyevlksrgv kfkffhkieq vhydankiie tisyaeqvkl
      421 qvpeydpvkk ingelrvwpg aplydqldae hvvrlqaekv nledpwtdwp dyrkgqlkkg
      481 idfdevvlgi pigtlktics eiiekeprwk amaanivttp tqsaqlwflp tlqelgfels
      541 ewglapglsa pnvvvyqnpm yswldstial psenwpknqq prflayytgp yllrkplpea
      601 pdtayqaien erlknafeqw lqdnsawfwp kagtylypqg lnfqlladvk dskdgyarfs
      661 sqffranvrp tdhytlsvpn saihrlkada sgfenlflcg dwidfggnvg yidgtiqsgq
      721 qaaqalrsrm hlgghkeiws eiks
//
LOCUS       WP_235138815             207 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4468 domain-containing protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235138815
VERSION     WP_235138815.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14730.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..207
                     /product="DUF4468 domain-containing protein"
                     /calculated_mol_wt=23248
     Region          33..164
                     /region_name="Bacova_04320_like"
                     /note="Uncharacterized proteins similar to Bacteroides
                     ovatus 4320; cl17095"
                     /db_xref="CDD:450153"
ORIGIN      
        1 mkrflfsttf ifslhlitpg faqkpglpyn rftgeitqtq vvktdqsrdk afsaikawis
       61 ktypnyrevv raedmssgri iiqdrepins nrfksfsyrv tidvkdghyt ctinnvktls
      121 lgsaayasad mdfsnmgmyg qdiddisrqi sitknkkala klyknrsvlk sllsdydksh
      181 ykmsaqfnmi qtglleavsg tsslavn
//
LOCUS       WP_235138827             343 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235138827
VERSION     WP_235138827.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 343)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 343)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..343
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=37043
     Region          15..337
                     /region_name="PRK06196"
                     /note="oxidoreductase; Provisional"
                     /db_xref="CDD:235736"
ORIGIN      
        1 meqvtisgny ngalqqpiqs gftaystaae viegidlsgk tavvtggyag igletvktfv
       61 eagakvvvpa rdinkavknl eglpnvtiek mdlmnpdsid afaekflltg splhllinna
      121 gimwvplqrd argyesqlat nhlghfqltq rlwpalkkag sarvvnvssy ghqmapfnfe
      181 dpnfehrdyd tlsgygqskt annlftield rrgknvgvra fslhpgsvng tdlgrvapie
      241 lfqqmgthda ngniypevas klktiaqgas ttvwcatspq lanlgglyce nadvaeldeg
      301 niqqnyddpl tlrgvqpysl daenakrlwk lseeltglqf aan
//
LOCUS       WP_235138851             334 aa            linear   BCT 02-MAR-2025
DEFINITION  T9SS type A sorting domain-containing protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235138851
VERSION     WP_235138851.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 334)
  AUTHORS   Veith,P.D., Nor Muhammad,N.A., Dashper,S.G., Likic,V.A.,
            Gorasia,D.G., Chen,D., Byrne,S.J., Catmull,D.V. and Reynolds,E.C.
  TITLE     Protein substrates of a novel secretion system are numerous in the
            Bacteroidetes phylum and have in common a cleavable C-terminal
            secretion signal, extensive post-translational modification, and
            cell-surface attachment
  JOURNAL   J Proteome Res 12 (10), 4449-4461 (2013)
   PUBMED   24007199
REFERENCE   2  (residues 1 to 334)
  AUTHORS   Glew,M.D., Veith,P.D., Peng,B., Chen,Y.Y., Gorasia,D.G., Yang,Q.,
            Slakeski,N., Chen,D., Moore,C., Crawford,S. and Reynolds,E.C.
  TITLE     PG0026 is the C-terminal signal peptidase of a novel secretion
            system of Porphyromonas gingivalis
  JOURNAL   J Biol Chem 287 (29), 24605-24617 (2012)
   PUBMED   22593568
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039201.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18962.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..334
                     /product="T9SS type A sorting domain-containing protein"
                     /GO_component="GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /calculated_mol_wt=36785
     Region          258..330
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     cl46851"
                     /db_xref="CDD:481191"
ORIGIN      
        1 mrakcitilt fvlsfqldvq aqftvndngf flapettltv sglsitpsgp fsfsnneisy
       61 atkpvsgnpn esikrvyamg npiafkgnil isyyenelnm nsenllqltk aglngeflvp
      121 tnksvvnsqe nfvsedvdwt niqyltltns gnilpvtlid fealvrenei vlawstshes
      181 ncdffevqhs gdgkewqtvg hvaavqqsne vndyayvhks psagsnfyrl rivdqdgtfa
      241 fssirnatwk sqlsvvffpn pvsdwlsiel egsssvrsia ivnakgqsvy hksnsaighn
      301 senridfknf psgiytiivm lkdgslstgk iskk
//
LOCUS       WP_235138714             782 aa            linear   BCT 02-MAR-2025
DEFINITION  lanthionine synthetase LanC family protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235138714
VERSION     WP_235138714.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 782)
  AUTHORS   Xie,L., Chatterjee,C., Balsara,R., Okeley,N.M. and van der
            Donk,W.A.
  TITLE     Heterologous expression and purification of SpaB involved in
            subtilin biosynthesis
  JOURNAL   Biochem Biophys Res Commun 295 (4), 952-957 (2002)
   PUBMED   12127987
REFERENCE   2  (residues 1 to 782)
  AUTHORS   Mayer,H., Bauer,H., Breuss,J., Ziegler,S. and Prohaska,R.
  TITLE     Characterization of rat LANCL1, a novel member of the lanthionine
            synthetase C-like protein family, highly expressed in testis and
            brain
  JOURNAL   Gene 269 (1-2), 73-80 (2001)
   PUBMED   11376939
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05147.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..782
                     /product="lanthionine synthetase LanC family protein"
                     /GO_process="GO:0031179 - peptide modification [Evidence
                     IEA]"
                     /calculated_mol_wt=87829
     Region          125..>393
                     /region_name="SPS1"
                     /note="Serine/threonine protein kinase [Signal
                     transduction mechanisms]; COG0515"
                     /db_xref="CDD:440281"
     Region          439..782
                     /region_name="LanC_like"
                     /note="Cyclases involved in the biosynthesis of
                     lantibiotics, and similar proteins; cl04955"
                     /db_xref="CDD:471159"
ORIGIN      
        1 masnqlyilp edvqvlpvea lpeqalakfe yeaddfiity tharntskii dassasllqe
       61 frkpkslpeg vltyallnnl daqkilegsy tfltrlrseg flvsyddafg kerqffkagd
      121 rfkdyeivsk legvadteiy kikkngqlya lkllktskkt pqllenfhne idilnalddv
      181 inpsltehge yetdhylime wvdgetclqa aeqyqnlhdq snvlalldis srilnayrhl
      241 hsqgiihsdv hpaniivsgs gelkiidfgl srmvskdqnp vrgglgfffe peyaqsvlds
      301 rpappstfag eqyalgally qiftgkqyln fsydkktmft qivneapvpf enldiiinpd
      361 iektifkala kqkedrfeni edfylammkv qesfpdrfae hkkmsvqifr dsilkdygfa
      421 ghllktglqm apkssvnfga agiaymflrr alvnsnpetl aladvwsdra ashihdpesg
      481 fyskdmdltp siiglssiyh tpsgvdlvqa lvsqasgdyg syynavrnfl mhasqpcenl
      541 dltlgksaal igcslilenm psydkfiknd llvfgkgmme eiwsivdsya aigeknpiny
      601 rgiahgwagi lyatlkwcri sgqdlpfnff trveqlvhlg ieengnvrwe isntepvswt
      661 gwchgsagyt flwtslfqft sdayylelak ktaghfldaa pagmngslcc grsgecyall
      721 svynatkdsl ylteakriak qmlphiysgq mrnhslykgn igaavlfeel drpefarmpl
      781 fe
//
LOCUS       WP_235138857             629 aa            linear   BCT 02-MAR-2025
DEFINITION  heparinase II/III domain-containing protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235138857
VERSION     WP_235138857.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 629)
  AUTHORS   Meier,E.L., Razavi,S., Inoue,T. and Goley,E.D.
  TITLE     A novel membrane anchor for FtsZ is linked to cell wall hydrolysis
            in Caulobacter crescentus
  JOURNAL   Mol Microbiol 101 (2), 265-280 (2016)
   PUBMED   27028265
REFERENCE   2  (residues 1 to 629)
  AUTHORS   Dong,W., Lu,W., McKeehan,W.L., Luo,Y. and Ye,S.
  TITLE     Structural basis of heparan sulfate-specific degradation by
            heparinase III
  JOURNAL   Protein Cell 3 (12), 950-961 (2012)
   PUBMED   23011846
REFERENCE   3  (residues 1 to 629)
  AUTHORS   Shaya,D., Tocilj,A., Li,Y., Myette,J., Venkataraman,G.,
            Sasisekharan,R. and Cygler,M.
  TITLE     Crystal structure of heparinase II from Pedobacter heparinus and
            its complex with a disaccharide product
  JOURNAL   J Biol Chem 281 (22), 15525-15535 (2006)
   PUBMED   16565082
REFERENCE   4  (residues 1 to 629)
  AUTHORS   Pojasek,K., Shriver,Z., Hu,Y. and Sasisekharan,R.
  TITLE     Histidine 295 and histidine 510 are crucial for the enzymatic
            degradation of heparan sulfate by heparinase III
  JOURNAL   Biochemistry 39 (14), 4012-4019 (2000)
   PUBMED   10747789
REFERENCE   5  (residues 1 to 629)
  AUTHORS   Su,H., Blain,F., Musil,R.A., Zimmermann,J.J., Gu,K. and
            Bennett,D.C.
  TITLE     Isolation and expression in Escherichia coli of hepB and hepC,
            genes coding for the glycosaminoglycan-degrading enzymes heparinase
            II and heparinase III, respectively, from Flavobacterium heparinum
  JOURNAL   Appl Environ Microbiol 62 (8), 2723-2734 (1996)
   PUBMED   8702264
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019552.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07940.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..629
                     /product="heparinase II/III domain-containing protein"
                     /GO_function="GO:0016829 - lyase activity [Evidence IEA]"
                     /calculated_mol_wt=70324
     Region          <37..346
                     /region_name="DUF4962"
                     /note="Domain of unknown function (DUF4962); pfam16332"
                     /db_xref="CDD:435283"
     Region          388..>542
                     /region_name="Hepar_II_III"
                     /note="Heparinase II/III-like protein; pfam07940"
                     /db_xref="CDD:429747"
ORIGIN      
        1 mkkifaclfl laavsgfaqq saphaqqatn aiqsirkahp rllllkgeeq ilvnqikkha
       61 ewanvhaqll gecdklmdlp pverikigrr lldksreclr rvfmlsyayr ttkddkylkr
      121 aekellavaa fedwnpthfl dvaemtmava igydwlfdql saesrkiikd ailkkgieps
      181 ldskynyfvt aehnwnqvcn agisfgalai aedepalanq iieravesip ramiksykpd
      241 gaypegfsyw gygtsfnvll isamqkalgt dfglsqspgf lktagflenl igptgmahnw
      301 gdsglregln ptlfwfaekn knpsllwsqk kllagtsdef lrnriipall vwgvktdlda
      361 ikpptqkvwv gqgpspvamm rtswtdqnai fvgfkagspa vnhahmdvgs fvldalgerw
      421 amdfgmqdyn sleakgvdlw naaqnsqrwq vfrlnnfahs tlifnsqlqn akgyaqidtw
      481 sdqgdqlaai sdlsqvyenq vksvkrgisi iqekfvlvrd eiatlekpvt mrwnlltaat
      541 ariidektve lsqngkkmfl ifdtkakini qtwstepphd ydepnpntqf igfettipan
      601 seasfnayfs tstdapatkp ladwpgklk
//
LOCUS       WP_235138747            1059 aa            linear   BCT 02-MAR-2025
DEFINITION  M64 family metallopeptidase [Dyadobacter fanqingshengii].
ACCESSION   WP_235138747
VERSION     WP_235138747.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 1059)
  AUTHORS   Kosowska,K., Reinholdt,J., Rasmussen,L.K., Sabat,A., Potempa,J.,
            Kilian,M. and Poulsen,K.
  TITLE     The Clostridium ramosum IgA proteinase represents a novel type of
            metalloendopeptidase
  JOURNAL   J Biol Chem 277 (14), 11987-11994 (2002)
   PUBMED   11815614
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021021.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09471.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..1059
                     /product="M64 family metallopeptidase"
                     /calculated_mol_wt=112936
     Region          14..293
                     /region_name="Peptidase_M64"
                     /note="IgA Peptidase M64; pfam09471"
                     /db_xref="CDD:430630"
     Region          300..391
                     /region_name="choice_anch_D"
                     /note="choice-of-anchor D domain; NF012200"
                     /db_xref="CDD:467954"
     Region          453..699
                     /region_name="YfbK"
                     /note="Secreted protein containing bacterial Ig-like
                     domain and vWFA domain [General function prediction only];
                     COG2304"
                     /db_xref="CDD:441879"
ORIGIN      
        1 maasdgeifg ltkildngpd nqrfniviva egflganaaa qtdfntrcqe ivdafrdepw
       61 fsegllaain ihrlnvrsdd agadnpatca dmstatavsa dtyfdasycs sgirrclacd
      121 wtlvrdtlta qlpqwhaaav lvnsserggc asgnvfatal stdwldvvmh elghaafrla
      181 deysywqgcs sgetdrdnap ggepadpnit assglaglkw ahlvgpltpv ptmqnpdcsa
      241 cdnrtnvrpd dheiglyega gyyhcgyfrp aytcrmrnsf epfcrvcaea vqdrlrpfft
      301 apalaasvsa ldfdsvgsgs tltltfnisn vgsvpvtgis lssdspnfsv apnsfasmap
      361 getqlisvtf gpaftigart gtilvtsnaa tlsieldafv ctpsarmdiq tadgsttlnf
      421 gdvgrrltmy rwfevrnlqr pcasqlhvtl ggppagfeya pgtnlnftla aptpaqpfts
      481 rrvyvafssp avggpdfngn ltittpddav tpsvtlnlia ravdpppvds vlvidrsgsm
      541 septgvpgas kmdlaiqaan lyiallkdnd rigvvrfnha annpgdvlqt lvvagdpetg
      601 agrasarsvl taanlsptga tsigggtilg stvldtavan aravvvltdg iqntnpdipa
      661 asaavaakip rqrvfavglg lnqledklvq lasvnngvaq itgelagdre fllqklyvqi
      721 lsdvadeafv qdptnvlfpg teqatdiyig evdvavdfii vyrkasaypa ielwleapdg
      781 tivrpgdags tfpnfmfvtg dghvyfrcqf pafpdrpqah igrwrvwmas rrgkpvlthg
      841 ysqgssvnfy ysvmakarsd mrlngflsqs syepgspmll vleptlygqp vkldapvear
      901 ftrpdgtiri itleetaygq ysgtfgdthq lgvypvstmv mattpagavv tryrlftgli
      961 fkpgqsggdp nggdpnggdp ngggkdpecr kaaavekqlr alllrlaekh peereeivsl
     1021 lgwlklfiad cckskrsked lqklqaimek arqlldeqe
//
LOCUS       WP_235139025             168 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Klebsiella pneumoniae].
ACCESSION   WP_235139025
VERSION     WP_235139025.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..168
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=19155
     Region          <1..148
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mvsgnrwqkn ivralraldn yfdkiadcdl kviitgsksp liklrndkrf ifidyvegst
       61 ldwlyknafc fiypslnegy gypplqamry gtpviascts sipevcadnv lyfdprnise
      121 ienrilqlst dgelynklal kgsehykkil qsqdkdlskl lrgifdar
//
LOCUS       WP_235139028             664 aa            linear   BCT 02-MAR-2025
DEFINITION  plastocyanin/azurin family copper-binding protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235139028
VERSION     WP_235139028.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012355.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00127.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..664
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /GO_function="GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /calculated_mol_wt=72485
     Region          47..351
                     /region_name="YliI"
                     /note="Glucose/arabinose dehydrogenase, beta-propeller
                     fold [Carbohydrate transport and metabolism]; COG2133"
                     /db_xref="CDD:441736"
     Region          543..662
                     /region_name="Auracyanin"
                     /note="Auracyanins A and B and similar proteins; cd04233"
                     /db_xref="CDD:259895"
ORIGIN      
        1 mknillttli slgcvsayaq skqnkeddfy rivtipipen ikmevggmqv lpdgrlatst
       61 rrgevwmign pylkgdgqps fhrfasglhe plgllyrgkd flisqrgevt rlvdtdndgi
      121 advydsfakw plsgnyhqys ygpvpmpnge llvtlnldwv grgasqskwr gwmlklgedg
      181 kltpfatglr spsgfgsykg difytenqgd wvgsgrmthl ekgdfagnpa glrwskeegs
      241 pvkltpsdvp nageplydva kklpglkapa vwfphtlvgi stsdfkedvt ngafgpfsgq
      301 mfvgdqghsi itrvdlekvn gvwqgtvfpf regfmsgilr mewgldgsmf vgqtsrgwsa
      361 tgkqefgiqr lvwtgkmpfe mknvrsmpdg feitftspvd kkaaadqeay klnsftykyh
      421 qtygspivnt qevplkgivv sedglkvrlv ldpallrkgy iheikadgvk gadgnpllha
      481 tgyytlneia sgnpvnasaf tttvkavavd hsahtmpvae tansapsakr vvempaswtn
      541 gpdqtitigt vpglkfdise iqvkagsrik ivfnnnddml hnlvitkpgt anavgeagln
      601 lglkgselny vpktndvlfh snivepekse siyfvapkqa gtyqyvctfp ghytlmqgkl
      661 kvtk
//
LOCUS       WP_235139061             429 aa            linear   BCT 02-MAR-2025
DEFINITION  M43 family zinc metalloprotease [Dyadobacter fanqingshengii].
ACCESSION   WP_235139061
VERSION     WP_235139061.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 429)
  AUTHORS   Chen,B.K., Overgaard,M.T., Bale,L.K., Resch,Z.T., Christiansen,M.,
            Oxvig,C. and Conover,C.A.
  TITLE     Molecular regulation of the IGF-binding protein-4 protease system
            in human fibroblasts: identification of a novel inducible inhibitor
  JOURNAL   Endocrinology 143 (4), 1199-1205 (2002)
   PUBMED   11897673
REFERENCE   2  (residues 1 to 429)
  AUTHORS   Mazerbourg,S., Overgaard,M.T., Oxvig,C., Christiansen,M.,
            Conover,C.A., Laurendeau,I., Vidaud,M., Tosser-Klopp,G., Zapf,J.
            and Monget,P.
  TITLE     Pregnancy-associated plasma protein-A (PAPP-A) in ovine, bovine,
            porcine, and equine ovarian follicles: involvement in IGF binding
            protein-4 proteolytic degradation and mRNA expression during
            follicular development
  JOURNAL   Endocrinology 142 (12), 5243-5253 (2001)
   PUBMED   11713222
REFERENCE   3  (residues 1 to 429)
  AUTHORS   Chelius,D., Conover,C.A., Baldwin,M.A. and Spencer,E.M.
  TITLE     Characterization of the enzymatic specificity of the IGF-dependent
            insulin-like growth factor binding protein-4 (IGFBP-4) protease
  JOURNAL   Growth Horm IGF Res 10 (6), 360-366 (2000)
   PUBMED   11161967
REFERENCE   4  (residues 1 to 429)
  AUTHORS   Overgaard,M.T., Haaning,J., Boldt,H.B., Olsen,I.M., Laursen,L.S.,
            Christiansen,M., Gleich,G.J., Sottrup-Jensen,L., Conover,C.A. and
            Oxvig,C.
  TITLE     Expression of recombinant human pregnancy-associated plasma
            protein-A and identification of the proform of eosinophil major
            basic protein as its physiological inhibitor
  JOURNAL   J Biol Chem 275 (40), 31128-31133 (2000)
   PUBMED   10913121
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017393.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05572.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..429
                     /product="M43 family zinc metalloprotease"
                     /calculated_mol_wt=47880
     Region          99..335
                     /region_name="ZnMc_pappalysin_like"
                     /note="Zinc-dependent metalloprotease, pappalysin_like
                     subfamily. The pregnancy-associated plasma protein A
                     (PAPP-A or pappalysin-1) cleaves insulin-like growth
                     factor-binding proteins 4 and 5, thereby promoting cell
                     growth by releasing bound growth factor; cd04275"
                     /db_xref="CDD:239802"
     Site            order(252..253,256,262)
                     /site_type="active"
                     /db_xref="CDD:239802"
     Region          358..428
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     pfam18962"
                     /db_xref="CDD:436869"
ORIGIN      
        1 mtnlssklll vfllfiiskt fvlaqesdal lnrcasterd almiskfpal qnlrikseea
       61 iqkrikankt slranadeii tipvvvhvvh seegktiggq gnanitdaqv qsqidvlned
      121 ygnasgykgf ytdslgidtg irfklvtivr tfnekeqfsp itdadqlaei spawltnryl
      181 niwvcrlsdr ylgtsqfpvv telndltagl staedeavrs ltdgviidfr yfgrnspait
      241 ssvynlgrtt thevghwlgl ihiwgdrncg tdhcedtpta ftknettdis ctpvfsecrg
      301 vttrnmieny mdyspdvcms vftndqkerm havlelsprr aklveyskit gedllvelyp
      361 npvsetltan vftpnfqlft vevinqrgqr mvsgatnlny ldvekfpsgl ynykvssggq
      421 tvtkrfvvr
//
LOCUS       WP_235139107             253 aa            linear   BCT 02-MAR-2025
DEFINITION  5'-nucleotidase C-terminal domain-containing protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235139107
VERSION     WP_235139107.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 253)
  AUTHORS   Knofel,T. and Strater,N.
  TITLE     X-ray structure of the Escherichia coli periplasmic 5'-nucleotidase
            containing a dimetal catalytic site
  JOURNAL   Nat Struct Biol 6 (5), 448-453 (1999)
   PUBMED   10331872
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014871.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02872.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..253
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /GO_process="GO:0009166 - nucleotide catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=28386
     Region          <40..228
                     /region_name="UshA"
                     /note="2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or
                     3'-nucleotidase, 5'-nucleotidase family [Nucleotide
                     transport and metabolism, Defense mechanisms]; COG0737"
                     /db_xref="CDD:440500"
ORIGIN      
        1 mtpslrqfry lawiaaiafc ascqrhlavt kneykqygid aqagedssvv kyylpykekm
       61 qaemskvigq tdqeltkpai petlmgnyfa damlteglkk datiqftlst kgglrttfpk
      121 gditvsnvfe lmpfenemvt lklsgenvqq vidfiakkeg episgmrmki kngvaydvti
      181 agqpfdktkt ynlltydyla dggdeleclr kpierkeink kvrealldni ndltrqgkki
      241 taqldgrivi vke
//
LOCUS       WP_235139191             103 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Dyadobacter fanqingshengii].
ACCESSION   WP_235139191
VERSION     WP_235139191.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 103)
  AUTHORS   Mullin,D.A., Zies,D.L., Mullin,A.H., Caballera,N. and Ely,B.
  TITLE     Genetic organization and transposition properties of IS511
  JOURNAL   Mol Gen Genet 254 (4), 456-463 (1997)
   PUBMED   9180700
REFERENCE   2  (residues 1 to 103)
  AUTHORS   Fischer,J., Maier,H., Viell,P. and Altenbuchner,J.
  TITLE     The use of an improved transposon mutagenesis system for DNA
            sequencing leads to the characterization of a new insertion
            sequence of Streptomyces lividans 66
  JOURNAL   Gene 180 (1-2), 81-89 (1996)
   PUBMED   8973350
REFERENCE   3  (residues 1 to 103)
  AUTHORS   Zekri,S. and Toro,N.
  TITLE     Identification and nucleotide sequence of Rhizobium meliloti
            insertion sequence ISRm6, a small transposable element that belongs
            to the IS3 family
  JOURNAL   Gene 175 (1-2), 43-48 (1996)
   PUBMED   8917074
  REMARK    Erratum:[Gene 1997 Mar 25;188(1):149]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01527.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..103
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=11536
     Region          9..99
                     /region_name="InsE"
                     /note="Transposase InsE and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2963"
                     /db_xref="CDD:442203"
ORIGIN      
        1 mgvqkgimtr ksydadfkqe vtrllasgri akeisetfgi aenllyrwkr matmktkskn
       61 gqsedinagk laaenarlra enerlktdre ilkkalglfs ksd
//
LOCUS       WP_235139212             438 aa            linear   BCT 02-MAR-2025
DEFINITION  BNR-4 repeat-containing protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235139212
VERSION     WP_235139212.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 438)
  AUTHORS   Roggentin,P., Rothe,B., Kaper,J.B., Galen,J., Lawrisuk,L.,
            Vimr,E.R. and Schauer,R.
  TITLE     Conserved sequences in bacterial and viral sialidases
  JOURNAL   Glycoconj J 6 (3), 349-353 (1989)
   PUBMED   2562507
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027224.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15892.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..438
                     /product="BNR-4 repeat-containing protein"
                     /calculated_mol_wt=49756
     Region          51..321
                     /region_name="BNR_4"
                     /note="BNR repeat-containing family member; pfam15892"
                     /db_xref="CDD:435002"
ORIGIN      
        1 mkisfllval vcltgklsaq nvstltedga wcwfsdprai ytndkngqvv tgwvtrsgdi
       61 vaasldpesg ktaqktlytk leiddhdnpa flqlpdktil tqytwhggsk dgmgviqntt
      121 lkpldittfs dsiifrpqte allakfkret ytyanpfils aennkvysfg rwvgfkpnfi
      181 tstnngktws dpvvvitska ldtnnqpyvk yysdgkskih liftdghpna eplnsvyycy
      241 yekgafwrad gskianldql pfnpsdativ ykatpetgka wifdivvdqk grpvvaytry
      301 ptnenhqyyy tvfdgkkwnd hhlidsgkwf pqtpegkker eenysgglti dpldpsivyf
      361 shevndvfei skgetkdlgk twkitpvtsn skldnvrpvv prykkkgdkt vllwmqnrky
      421 vhytdydtri vwkeltsp
//
LOCUS       WP_235139214             296 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-binding protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235139214
VERSION     WP_235139214.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13460.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..296
                     /product="NAD(P)H-binding protein"
                     /calculated_mol_wt=32044
     Region          3..263
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(7,9..10,12,31..33,71..73,107..109,120,124,144..147)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187542"
     Site            order(85,109,120,124)
                     /site_type="active"
                     /db_xref="CDD:187542"
ORIGIN      
        1 mkyiitgslg nisrpvtknl vaaghevtvi sssadkksei eslgataaig svtdvaflkn
       61 tfqnadvayl mipsdfsltd yakfqlevan kylealkgsn ikhvvllssl gahmrkgagp
      121 idalgyleek lleipdlnln flrpsyffsn lfslagmikh agiagnnfgd ndeklvltht
      181 dhiaevatdt llhlftgkni ttianderhp seiatilgna vgkentpwit fsdedaykgm
      241 lgaglnesfa nlylamgqal rsgqmqeeyw knrpeklgny kledfakefa gayaga
//
LOCUS       WP_235139255             177 aa            linear   BCT 02-MAR-2025
DEFINITION  5' nucleotidase, NT5C type [Dyadobacter fanqingshengii].
ACCESSION   WP_235139255
VERSION     WP_235139255.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 177)
  AUTHORS   Rampazzo,C., Kost-Alimova,M., Ruzzenente,B., Dumanski,J.P. and
            Bianchi,V.
  TITLE     Mouse cytosolic and mitochondrial deoxyribonucleotidases: cDNA
            cloning of the mitochondrial enzyme, gene structures, chromosomal
            mapping and comparison with the human orthologs
  JOURNAL   Gene 294 (1-2), 109-117 (2002)
   PUBMED   12234672
REFERENCE   2  (residues 1 to 177)
  AUTHORS   Rampazzo,C., Johansson,M., Gallinaro,L., Ferraro,P., Hellman,U.,
            Karlsson,A., Reichard,P. and Bianchi,V.
  TITLE     Mammalian 5'(3')-deoxyribonucleotidase, cDNA cloning, and
            overexpression of the enzyme in Escherichia coli and mammalian
            cells
  JOURNAL   J Biol Chem 275 (8), 5409-5415 (2000)
   PUBMED   10681516
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018627.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06941.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..177
                     /product="5' nucleotidase, NT5C type"
                     /GO_function="GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009264 - deoxyribonucleotide catabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=20297
     Region          1..176
                     /region_name="YorC"
                     /note="5'(3')-deoxyribonucleotidase [Nucleotide transport
                     and metabolism]; COG4502"
                     /db_xref="CDD:443586"
ORIGIN      
        1 mlrltldmdd vlanthkklv sivhndfsti yneqqlsksa frdilhpkqq aklhkiidtp
       61 gffadievmg gavetvykls kfyeifvata cmefptsfnd kfawlkkhfp fipwtnvvfc
      121 gyksiiqsdy liddhvrnln afkgtgilft aphniketsy krvsnwkdvs elflpia
//
LOCUS       WP_235139261             340 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA reductase [Dyadobacter fanqingshengii].
ACCESSION   WP_235139261
VERSION     WP_235139261.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 340)
  AUTHORS   Lee,C.Y. and Meighen,E.A.
  TITLE     Cysteine-286 as the site of acylation of the Lux-specific fatty
            acyl-CoA reductase
  JOURNAL   Biochim Biophys Acta 1338 (2), 215-222 (1997)
   PUBMED   9128139
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017686.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05893.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..340
                     /product="acyl-CoA reductase"
                     /GO_function="GO:0003995 - acyl-CoA dehydrogenase activity
                     [Evidence IEA]"
                     /GO_process="GO:0008218 - bioluminescence [Evidence IEA]"
                     /calculated_mol_wt=38074
     Region          19..>158
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
ORIGIN      
        1 misriqrina finlgkfitn pqnepvieew iaransknnw ftpenvarsl nalahqflna
       61 dklnawvary pepassqkig vvmagnipav gfhdalsvii sghillakps sddqmlihsl
      121 lgtlvelepg lsehirfver lneadayiat gsdntaryfh yyfakkpnii rknrtsvavl
      181 tghesseela algrdalqyf glgcrnvskl fvpagydftk fyesiqdldk tylhhhkyfn
      241 nyeynksifl vnrvphydng flllteskal vsaisvlhye tyesisdiea plkeqaekiq
      301 cvvtnadidl pglipfgktq epgltdyada vdtmaflaef
//
LOCUS       WP_235139288            1200 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Dyadobacter fanqingshengii].
ACCESSION   WP_235139288
VERSION     WP_235139288.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 1200)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1200
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..1200
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=135670
     Region          29..523
                     /region_name="CHASE3"
                     /note="Extracytoplasmic sensor domain CHASE3 (specificity
                     unknown) [Signal transduction mechanisms]; COG5278"
                     /db_xref="CDD:444089"
     Region          45..171
                     /region_name="HK9-like_sensor"
                     /note="ligand binding sensor domain of Rhodopseudomonas
                     palustris histidine kinase HK9 and similar proteins;
                     cd19410"
                     /db_xref="CDD:438628"
     Site            order(45,48,58..59,62..63,65..66,69..70,149..150,153,156)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:438628"
     Region          <489..1195
                     /region_name="PRK11107"
                     /note="hybrid sensory histidine kinase BarA; Provisional"
                     /db_xref="CDD:236848"
ORIGIN      
        1 mrktsnsiiq qlqivfsfsi lllifsllas yystqklinn selvnhtnqv lieaesiisy
       61 vkdaetgqrg ylitneqifl dpysdaytkt tisynnlsel tadnpnqqkn lrevkalyea
      121 kfgqmqniid qtrrnptfad dqdgrlkemi kgkkimddlr lvverikfde nkilqdrieq
      181 qqiyirytpv llviaalisi litvfaymri kndmdkrlaa qlleeqkyae terrisrieq
      241 itrqvsdgdy tvrsqdesdd dlgrisaaln tmtasleqtf ndlttknwlq tgaveisdai
      301 rgerilkkla tnlintvtry skaqlgtiyi qdndwnfrla ssyaaehapd sitpgaglag
      361 qvieskkpli vydvpenylk itstigetkp vtlailpliy ayecigiiel gflnkpdknd
      421 iqflegnlea iatginsald ylklqnflee tqaqseelqt qhnelenlna eleaqsqklq
      481 aseeelrvqq eelqqtneel eersglleek nieiqkkaee lelttrykse flanmshelr
      541 tplnsillls rllaendekn lsgeqveyat viqssgngll glideildls kieagkmeld
      601 yvsvsvkeiv ddlkglfspv arekgldfki niensaplvi etdkmrleqi lknlisnalk
      661 ftsqgsvqid iqrkpgmenm isfvvsdtgi gvapekqqhi feafqqadgs tkrkyggtgl
      721 glsisrelvk llggeislts kldegsvftl cipiakaysa qvseqqnyfl nhneeslktk
      781 pegidkrfis tvipqsiddd rdniesadkt iliieddttf akslldytrk lgykgivavr
      841 gdeglelaqt ftpmgilldi qlpiisgwdv mdelksrpet rhipvhimss hrmknesllk
      901 gavdfidkpv afekmeeifk kiefvvnrqs kkvlivedns mhakalayyl ssfninsqlk
      961 sdigegletl qnnevdcvil dmgipdkkay emlemakmnp gfehipiivf tgkslsmtee
     1021 lrikqyadsi ivktahsyqr mldevslflh vveenkkspq kmsdrqklgg lseilkgktv
     1081 liadddvrni fslskslenf kmnvltaldg kealqrleen pnvdvvlldm mmpqmdgyet
     1141 arrirenhkw rnlpviavta kamtgdrekc inagasdyit kpvdidqlms llrvwlyeks
//
LOCUS       WP_235139344             398 aa            linear   BCT 02-MAR-2025
DEFINITION  putative sugar nucleotidyl transferase [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235139344
VERSION     WP_235139344.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024951.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13562.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..398
                     /product="putative sugar nucleotidyl transferase"
                     /calculated_mol_wt=43591
     Region          4..387
                     /region_name="alt_bact_glmU"
                     /note="UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase; TIGR03991"
                     /db_xref="CDD:274907"
ORIGIN      
        1 mptiilfddp airlqllpft ytrpvsairc giskisekws lwldtavsyq tsnylaaafp
       61 mltsydsiyi ngalcpdagl veaienlplq salisgddil aircnelwkp dmgissyepq
      121 hysgsftlir nvwdifafng eqietdfaki tankisepli dpfthcynle nifiekgavi
      181 kasilnaekg piyigkdali qegsmiqgpf sigegsvlaq gtkirpnttv gpfsklggev
      241 sncvlfgysn kghdgylgns vlgewcnlga ntnnsnlknd hgnvklhsya tndlidtglr
      301 fcglmmgdys kagistmfnt gsvvgvsvnv fgagfqakht psfswggnve gfteyrfqka
      361 ldvakdtvsr rnltfgehde qilrsvfeqt qqqrdfec
//
LOCUS       WP_235139041             277 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6216 family protein [Klebsiella pneumoniae].
ACCESSION   WP_235139041
VERSION     WP_235139041.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 277)
  AUTHORS   Hejnova,J., Pages,D., Rusniok,C., Glaser,P., Sebo,P. and
            Buchrieser,C.
  TITLE     Specific regions of genome plasticity and genetic diversity of the
            commensal Escherichia coli A0 34/86
  JOURNAL   Int J Med Microbiol 296 (8), 541-546 (2006)
   PUBMED   17049458
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040027.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19723.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..277
                     /product="DUF6216 family protein"
                     /calculated_mol_wt=31650
     Region          11..265
                     /region_name="DUF6216"
                     /note="Family of unknown function (DUF6216); pfam19723"
                     /db_xref="CDD:437555"
ORIGIN      
        1 meslissiwn fdglinsali fvtfgllgvf iwkragsays llnrlwefcl ggktfhdgki
       61 nayfnerndv erfnvlfnvg arnkeeiksl inwtkkknid irhvtaakgw feistlkaik
      121 plfianvgvf vscvltmlll snfmllalkp salvrlgddk swvwindhia essiwtnnyl
      181 plnwtewkld kkqcesedfd ktvfsekagi svrsvdrice nfssgslsdt inniiknqkl
      241 awvlaiypfi ftiicffrll rrgaasklyn evhnsqn
//
LOCUS       WP_235139368             316 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Dyadobacter fanqingshengii].
ACCESSION   WP_235139368
VERSION     WP_235139368.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024118.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12706.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..316
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=34733
     Region          17..315
                     /region_name="PDE1"
                     /note="cAMP phosphodiesterase [Signal transduction
                     mechanisms]; COG5212"
                     /db_xref="CDD:444071"
ORIGIN      
        1 mrillssflv fivsicfcaa qdgfrvvplg vrgggddgnl saymvapvns nafvcldggt
       61 vtngiakava nkvfpvpaev vlrkyikayl ishphldhls gmvinsvedt tkniygteyc
      121 ietlksnyfn weswpnltne gaspalkkys ykmlgedqev nieqtemsvk ifklshsnpy
      181 estaflikkg gsyllyfgdt gpdeveksdk matiwkavap lvkskqlagi flevsypnkq
      241 ldrqlyghlt pkwfmkelnv laalsgvesm kglnvvithm kptadneski kaelasdnal
      301 glnlifpeqg kafelk
//
LOCUS       WP_235139371             123 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235139371
VERSION     WP_235139371.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 123)
  AUTHORS   Ren,J., Sainsbury,S., Nettleship,J.E., Saunders,N.J. and Owens,R.J.
  TITLE     The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals
            a novel protein fold incorporating a helix-turn-helix motif
  JOURNAL   Proteins 78 (7), 1798-1802 (2010)
   PUBMED   20196080
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013540.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01381.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..123
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=14209
     Region          13..122
                     /region_name="HigA"
                     /note="Antitoxin component HigA of the HigAB
                     toxin-antitoxin module, contains an N-terminal HTH domain
                     [Defense mechanisms]; COG5499"
                     /db_xref="CDD:444250"
ORIGIN      
        1 menyeyktee eyeaamvvie rlmdkgeaql sseeletirt malsaqayek khyyvepprt
       61 fqgmielrmy elklkqkdla eklgvsnakl slimngkqrp dvpfikavht eldipadfil
      121 qhi
//
LOCUS       WP_235139374             448 aa            linear   BCT 02-MAR-2025
DEFINITION  D-arabinono-1,4-lactone oxidase [Dyadobacter fanqingshengii].
ACCESSION   WP_235139374
VERSION     WP_235139374.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 448)
  AUTHORS   Huh,W.K., Lee,B.H., Kim,S.T., Kim,Y.R., Rhie,G.E., Baek,Y.W.,
            Hwang,C.S., Lee,J.S. and Kang,S.O.
  TITLE     D-Erythroascorbic acid is an important antioxidant molecule in
            Saccharomyces cerevisiae
  JOURNAL   Mol Microbiol 30 (4), 895-903 (1998)
   PUBMED   10094636
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015963.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04030.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..448
                     /product="D-arabinono-1,4-lactone oxidase"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0003885 - D-arabinono-1,4-lactone oxidase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=50061
     Region          32..441
                     /region_name="bact_FAD_ox"
                     /note="FAD-linked oxidoreductase; TIGR01679"
                     /db_xref="CDD:130740"
ORIGIN      
        1 mnkrtfikls salmtaplft pltgwaradk lknwagnley sterldqakt lgqvqeivrk
       61 yprlkvlgtr hcfnniadtk dqfislvnae ehivldeknk tvtvnsgmky gqlspylhkk
      121 gfalhnlasl phisvagaca tathgsgdkn gnlatavsam emvtaagevv qlsrqndgek
      181 fnaavvnlga lgvvtkvtld mvptfmmgqf vyenlpldql kdnfekiess gysvslftnw
      241 qskditevwv kqkiegetpl kaekeffgak latknlhpip elsaencteq mgvsgpwyer
      301 mphfkmgftp ssgvelqsef fvprknavda ilaisklgnq vgphlltsei rtiaaddfwl
      361 spcykqdsva ihftwkqewd avskllpiie relapydvrp hwgklfsvsp dllakryvkm
      421 eefitlaiem dpkgkfrndf lnlnifrv
//
LOCUS       WP_235139435             469 aa            linear   BCT 02-MAR-2025
DEFINITION  CDP-glycerol glycerophosphotransferase family protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235139435
VERSION     WP_235139435.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 469)
  AUTHORS   Fitzgerald,S.N. and Foster,T.J.
  TITLE     Molecular analysis of the tagF gene, encoding
            CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase of
            Staphylococcus epidermidis ATCC 14990
  JOURNAL   J Bacteriol 182 (4), 1046-1052 (2000)
   PUBMED   10648531
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016357.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04464.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..469
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0047355 - CDP-glycerol
                     glycerophosphotransferase activity [Evidence IEA]"
                     /calculated_mol_wt=53730
     Region          <207..387
                     /region_name="Glyphos_transf"
                     /note="CDP-Glycerol:Poly(glycerophosphate)
                     glycerophosphotransferase; cl42225"
                     /db_xref="CDD:478041"
ORIGIN      
        1 measgiasgs lqqrtkkpiv ilitnsfaai niihsglikk laveyhvyll stmirsaevn
       61 qindqfgldl klvnldlpcq pawlallrkv ekaffaecfs ivtqkikyqs rkewqwmpkm
      121 lrlinqksft ksilkvirks iisltsfsik lkpllsfhfh gvissspldl renrivnflr
      181 rrhvkslamv iswdnltskg vinadhdvtl vwndfmknef lrfysifnvt epkviatgip
      241 rfdcyfqkts enqnaearkr fnvpsgnqvi liatsalrhf pnqlevikdv lrfakvegnl
      301 hvivrchpad nvdaynqlse eefisiwhpg nlpkssddrf ynwfpeldfl dslsqtlric
      361 dvcvqfastm kldaaacgkr visiaydgnn plpyhqsvkr lydynhqvpl nalqfdefvt
      421 srdqlytalk aslykqksqn alsvikpfth ftdpksvdft fntiaawlt
//
LOCUS       WP_235139493             740 aa            linear   BCT 02-MAR-2025
DEFINITION  outer membrane beta-barrel protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235139493
VERSION     WP_235139493.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026255.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14905.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..740
                     /product="outer membrane beta-barrel protein"
                     /calculated_mol_wt=83635
     Region          60..301
                     /region_name="BtuB"
                     /note="Outer membrane cobalamin receptor protein BtuB
                     [Coenzyme transport and metabolism]; COG4206"
                     /db_xref="CDD:443355"
     Region          307..714
                     /region_name="OMP_b-brl_3"
                     /note="Outer membrane protein beta-barrel family;
                     pfam14905"
                     /db_xref="CDD:434300"
ORIGIN      
        1 mktsslllfi tlltmpamaq tpatqnppae kapekakdin lneviitkkk plivqeidkt
       61 vvnvesmisa aasntlevle ktpgisinsn geislngrsg vlvlidgknt ylsgqdlaay
      121 lkslpggnld kielidnpsa kydasgnaii nirlkknrig gltgsvslga slgryarnnd
      181 avnlnynhkk lnlfanlgyn eeknyredhf drrffsegga listvdlqnn lvykdrgfna
      241 nigmdyaata ktvygfifnv nkgrrngvfn yesndfdakn rlertgegdt rardtrtnlg
      301 fnfnlqhkfd skgkelsadi nylnynsngn qalqnftyap egeligqetf ryvipagidi
      361 ytakadyvhp lknkarieag fkssivdndn lnkfynvrga eetidnrqsn hfkyhenina
      421 vylnsqkswk rlgvqiglra entlvrgnql gndevrgssf tknytglfps ayisykldtl
      481 gkntlglmav rritrpnyql lnpfvfyrdq ysytsgnpml npqyqsriel kfqhkqflnm
      541 glsyntfsdl ifqtteavnd ifttrpknia ggfmlllntt vstsptkwwy lnytarlski
      601 gmngrvyten lhfdvnilrl einnyftisp swnaelggyy asrdmngqtl tkgmyrvnga
      661 vqkkiwkgkg slrvafddif hswiynnrsl slkqseyfqt sesdtqrisf amtyrfgket
      721 farkrrhnnn asdeekgrid
//
LOCUS       WP_235139548             966 aa            linear   BCT 02-MAR-2025
DEFINITION  putative LPS assembly protein LptD [Dyadobacter fanqingshengii].
ACCESSION   WP_235139548
VERSION     WP_235139548.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040057.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19838.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..966
                     /product="putative LPS assembly protein LptD"
                     /calculated_mol_wt=106723
     Region          258..756
                     /region_name="LptD_2"
                     /note="LptD protein; pfam19838"
                     /db_xref="CDD:466203"
ORIGIN      
        1 mlelkrkaii issvvaafli fstvscvqqr tkrtgknqdk pnvtrsakqt adsllavknq
       61 agadttgagk natsksgsvt lgdtsltnng ltdstavdsl snpddlqntv qytaedstim
      121 davlkqvhly gnaevtygti nlkaayirln wvtnevyaig ipdpadstsk ktigdpifqd
      181 gpetyntkei rynfkskkal iqgivtqegd gnirgekvkk daegnfyirh siyttcnlth
      241 phyfinapki kmvnkkqvis gpfnlvisdv plpialpfgf fpfpkkkeng tsgilfptyg
      301 eepngrgfyl reggyyfais eyinasvtgq iystgswglg vastysrryq yngnfalrfn
      361 knkssdevdr dlgrgqtndf siiwshaprp rgnsqfsanv nvssnsynql qefdtqkyis
      421 nvasssvqyn rtfgqfmraa aslrvnqnfg qidptdgikk ggktnistdf sfgvnqiapf
      481 alkggrgrwy esfrlgmdfs gnyaltnslt aidtsssslg fsiinnvdpt rantakvvaf
      541 nldnlpemlk daqftgrysl pislpnfkil rfvnvtpsls lqgevftkqy aysveknqvr
      601 idtlrqagte ysynfgagvn trfygtffvr gkrleairht vipslsftyt pdftgdafgf
      661 yqkvniknrg ldreyslsrf rgvgtgvsng rassvisfsl nnsfemklkt ksdtaaqqfe
      721 kislldnlsl ggnynllads lnlsnitvna narigknlnl nfnmnldpya yeanprilsn
      781 qvgtkvnrya itqgqglanl qnlgftlgts fapkssdkak tvppaangnp tvteeqrefi
      841 aqnpelyvdf nipwnvslny nfgltkpgls kaqliqavqv tgdlslsknf kvsvntgfdf
      901 tafeptitsl tlyrdlhcwd msfswtpfag sasrvsnynf tlkvkssilq dlkvtrrrsf
      961 ydrsay
//
LOCUS       WP_235139593             604 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235139593
VERSION     WP_235139593.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 604)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 604)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 604)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..604
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=66073
     Region          22..432
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(121,151,153,186,188,411..413,415,417)
                     /site_type="active"
                     /db_xref="CDD:173850"
ORIGIN      
        1 mavaeankts ikggeflike tsssqifipe efteeqrmia dtcreflgke iwpildeidh
       61 akspdlisgl mdkagelgll gtavpeeygg fgmnfntsml vaeatgagns fsvalsahtg
      121 igtlpilyyg ndeqkskylp klatgewkaa ycltepdsgs dansgktkai ltsdgqhyai
      181 tgqkmwitng gfadvfivfa kieengqgdk nlsafiieks fggitmnape hkmgikgsdt
      241 rqiffndclv pvenmlserg ngfkiavnil nigriklaaa alggakkvtq qaiayanerk
      301 qfgtsiaqfg aikhklaema tqmfatesaa yrvgqniddl istfqekgms daesklkale
      361 elaiecaimk vhgsevldyv vdegvqiygg mgfsadapmd rayrdsrinr ifegtneinr
      421 llvvdmllkr amkgqidlmg pamavgkeim sipdfsmsed etlfapekkv iqnlkkaalm
      481 vagaavqkfm mklseeqeii mnladmviei yaaesvllrv ekridllgae anklhedmai
      541 iylhravekv nnagraaits faesdelrvm lmglkrftki epvnlkdarr rladeliakn
      601 dyif
//
LOCUS       WP_235139611             324 aa            linear   BCT 02-MAR-2025
DEFINITION  1-acyl-sn-glycerol-3-phosphate acyltransferase [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235139611
VERSION     WP_235139611.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 324)
  AUTHORS   Neuwald,A.F.
  TITLE     Barth syndrome may be due to an acyltransferase deficiency
  JOURNAL   Curr Biol 7 (8), R465-R466 (1997)
   PUBMED   9259571
REFERENCE   2  (residues 1 to 324)
  AUTHORS   Bione,S., D'Adamo,P., Maestrini,E., Gedeon,A.K., Bolhuis,P.A. and
            Toniolo,D.
  TITLE     A novel X-linked gene, G4.5. is responsible for Barth syndrome
  JOURNAL   Nat Genet 12 (4), 385-389 (1996)
   PUBMED   8630491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013702.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01553.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..324
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /GO_function="GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=36529
     Region          7..206
                     /region_name="LPLAT"
                     /note="Lysophospholipid acyltransferases (LPLATs) of
                     glycerophospholipid biosynthesis; cl17185"
                     /db_xref="CDD:473073"
     Site            order(40,43,46,62..65,120..122)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153244"
ORIGIN      
        1 mffyfsrflv rlalpiylkk lcvkgfdklh kgpvllasnh sgsffdavvi gaiirqpift
       61 ltrgdvfkkk aaafwlrqik lipvfrgseg rqyvknhdvt vqegyeamkg ggaviifseg
      121 vcvnewrlrp lgkgtarmay htwygdnalk nmgvvptgvn yehfrgpgkr vslrfgdail
      181 indiktdple yerwlrefne ilerkmsaev wsipaelske ekvanlnalf adctvpatgn
      241 afqnalgwig rtihrpfynf lerktaklta rsvfydsvlf gmlmylypva vvllsliiga
      301 lvgwqaglal ffalpilawf gshy
//
LOCUS       WP_235139777             513 aa            linear   BCT 02-MAR-2025
DEFINITION  Fic family protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235139777
VERSION     WP_235139777.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 513)
  AUTHORS   Garcia-Pino,A., Christensen-Dalsgaard,M., Wyns,L., Yarmolinsky,M.,
            Magnuson,R.D., Gerdes,K. and Loris,R.
  TITLE     Doc of prophage P1 is inhibited by its antitoxin partner Phd
            through fold complementation
  JOURNAL   J Biol Chem 283 (45), 30821-30827 (2008)
   PUBMED   18757857
REFERENCE   2  (residues 1 to 513)
  AUTHORS   Lehnherr,H., Maguin,E., Jafri,S. and Yarmolinsky,M.B.
  TITLE     Plasmid addiction genes of bacteriophage P1: doc, which causes cell
            death on curing of prophage, and phd, which prevents host death
            when prophage is retained
  JOURNAL   J Mol Biol 233 (3), 414-428 (1993)
   PUBMED   8411153
REFERENCE   3  (residues 1 to 513)
  AUTHORS   Komano,T., Utsumi,R. and Kawamukai,M.
  TITLE     Functional analysis of the fic gene involved in regulation of cell
            division
  JOURNAL   Res Microbiol 142 (2-3), 269-277 (1991)
   PUBMED   1656497
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014691.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02661.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..513
                     /product="Fic family protein"
                     /calculated_mol_wt=58866
     Region          211..>390
                     /region_name="COG3177"
                     /note="Fic family protein [Transcription]"
                     /db_xref="CDD:442410"
ORIGIN      
        1 metqgltrlt vnfqgratpe pgyiagygai isayglkvpi pevlaiislk hvkyetknwr
       61 vlttrhtppd tllghltfam kyegielgvl kalfltvpaa dithevlkep ngqysrriwf
      121 lyewlmdrkl eipdlpfsny vdlvddtlqf aannaensmr hrirnnlpgv refcpmirkt
      181 tllkrfigln lsqvakdlvs klhpavkgrm gtilayqeak ssydiesvee rntradrwar
      241 vlrhagdfsi snqelirlqq qlienprfik lgfrekegfi geqerrhgtl lithfpakak
      301 didqlmsgli etarrlegde afdavlatai vsfgfvfihp fidgngrihr yllhnllsrk
      361 gfvpkditfp isatildkal eyqdilqqfs yprisiidwk ptsnyhfnid setidlyryf
      421 datsyaefly gcveetlnvk fpkevdyldk ydrmkqfldd yfempdqlvg tlirllnqaq
      481 gklgnhankt dlgkltkeea qtieskyaei fgd
//
LOCUS       WP_235139784             382 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Dyadobacter fanqingshengii].
ACCESSION   WP_235139784
VERSION     WP_235139784.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024872.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13481.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..382
                     /product="AAA family ATPase"
                     /calculated_mol_wt=43839
     Region          99..>303
                     /region_name="RepA"
                     /note="RecA-family ATPase [Replication, recombination and
                     repair]; COG3598"
                     /db_xref="CDD:442817"
     Region          <345..377
                     /region_name="HTH_CRP"
                     /note="helix_turn_helix, cAMP Regulatory protein
                     C-terminus; DNA binding domain of prokaryotic regulatory
                     proteins belonging to the catabolite activator protein
                     family; cl46859"
                     /db_xref="CDD:481199"
ORIGIN      
        1 mevsqnlple feqpsgnktt kviqalnpkf epllgrtlla dsrrelnksa tfvehinrir
       61 eprtskglfi vqtasqwieq akerpipkml fgqfwfefei cilfadtnlg ksilavqign
      121 siskgehirg fpleaekqmi lyfdfelndk qfesrysmny qqhytfddnf irieidpdat
      181 vpedrtfdef lrdsiessll atnakvliid nltylsnete kardalplmk hlkalkskyn
      241 lsilviahtp krdlskpitr ndlagskmli nftdscftvg esasdknlry lkqikvrqne
      301 fiydgenvcv cqlhkpnnfv efelinygse rehlkivtek drenqtaeik elkaqgksyr
      361 digaslgish mtvcrllkgt qa
//
LOCUS       WP_235139820             913 aa            linear   BCT 02-MAR-2025
DEFINITION  TIM-barrel domain-containing protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235139820
VERSION     WP_235139820.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 913)
  AUTHORS   Henrissat,B.
  TITLE     Glycosidase families
  JOURNAL   Biochem Soc Trans 26 (2), 153-156 (1998)
   PUBMED   9649738
REFERENCE   2  (residues 1 to 913)
  AUTHORS   Henrissat,B.
  TITLE     A classification of glycosyl hydrolases based on amino acid
            sequence similarities
  JOURNAL   Biochem J 280 (Pt 2) (Pt 2), 309-316 (1991)
   PUBMED   1747104
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01055.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..913
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..913
                     /product="TIM-barrel domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=101888
     Region          25..116
                     /region_name="AGL_N"
                     /note="Alpha-glucosidase, N-terminal; pfam16338"
                     /db_xref="CDD:465098"
     Region          129..250
                     /region_name="GH31_N"
                     /note="N-terminal domain of glycosyl hydrolase family 31
                     (GH31); cd14752"
                     /db_xref="CDD:270212"
     Site            168
                     /site_type="active"
                     /db_xref="CDD:270212"
     Region          231..667
                     /region_name="Glyco_hydro_31"
                     /note="Glycosyl hydrolases family 31; pfam01055"
                     /db_xref="CDD:460044"
     Region          686..759
                     /region_name="DUF5110"
                     /note="Domain of unknown function (DUF5110); pfam17137"
                     /db_xref="CDD:465360"
     Region          834..912
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     cl46851"
                     /db_xref="CDD:481191"
ORIGIN      
        1 miykyflall fvvvgklsfg qgagnyvsfe kgkgsiiiqg trgailiqaf speifkiqll
       61 psknapalds sfsvilppss aaqnivetnn nieirsekct lvidkfplnv alksgkdiki
      121 ketrgfvqtk dsvsflfnin pkdvfhgagg rpfgpdlsrk afdfynswey eyfdqstgls
      181 qslnvpfivs shkygllfds dkpgsmrmyv gavdstllrv esastgkway ylihgnnnde
      241 ilanytlltg rqplpprwaf gyiqsksgyn nvseatvait klqdqgfpvd alalnqhwyg
      301 dqnargnmdw daknwpnaag mvkslsakgv ktilvtdpyi stkstnyksa etlslfakkp
      361 ngtetytqdv gsataglldi fkpaaqtwlw ekhkkmavqg iagwwsekte pdphptdavh
      421 elgnafqihn lyalfwsktf ynnftkdfpe krifhmtrsg wagsqrygal pwsgdvsryw
      481 aglklqipii lqagmsglgy mhsdvggait msdkvdkdee ldlrwfqfgt ftpilrnagq
      541 rdniepfnls epfysavkky atvryqllpy iyslawknsv sgrpiclpmd yfnnvralgn
      601 lsdqyffgen lliapvllhg mpsrkvvlpp gkwfnfwnne vyngnanifp kltvdhipvy
      661 akggsfipls tsttkkstdn ynsdsltvkf yqdisvpsss ftmfhddgld psslaklkye
      721 lvdfvgkvsn dqvnvtiqrt ksfdksldkr hltfeiknft tnptavtlng qsfpvvylsa
      781 efknntayyd llgkqlkvqf dwdcnttani svtraglevi tgsepnvndh vltvfpnpsr
      841 spvsvkvtvp etgfyelevy nvvgnavynk algqhskgkv lhlnldlkvs sgaylvrlrn
      901 gqgqfftkki viq
//
LOCUS       WP_235139864             166 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6691 family protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235139864
VERSION     WP_235139864.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042761.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20398.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..166
                     /product="DUF6691 family protein"
                     /calculated_mol_wt=17887
     Region          58..>162
                     /region_name="Sulf_transp"
                     /note="Sulphur transport; pfam04143"
                     /db_xref="CDD:461192"
ORIGIN      
        1 mmeklenasa stlleedkdg sntqksaegf aanfkyliig vlfgivfvka eivswfriqe
       61 mfrfdsfhmy gvigsavlvg llsvqvikrf sikttsgeev vipdktfsqg qiyggllfgv
      121 gwaitgacpg plfaqigsgy laviitllsa iagtwtygll rpklph
//
LOCUS       WP_235139868             398 aa            linear   BCT 02-MAR-2025
DEFINITION  L,D-transpeptidase family protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235139868
VERSION     WP_235139868.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 398)
  AUTHORS   Biarrotte-Sorin,S., Hugonnet,J.E., Delfosse,V., Mainardi,J.L.,
            Gutmann,L., Arthur,M. and Mayer,C.
  TITLE     Crystal structure of a novel beta-lactam-insensitive peptidoglycan
            transpeptidase
  JOURNAL   J Mol Biol 359 (3), 533-538 (2006)
   PUBMED   16647082
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015679.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03734.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..398
                     /product="L,D-transpeptidase family protein"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=45111
     Region          <161..391
                     /region_name="YcbB"
                     /note="Murein L,D-transpeptidase YcbB/YkuD [Cell
                     wall/membrane/envelope biogenesis]; COG2989"
                     /db_xref="CDD:442228"
ORIGIN      
        1 mqmlsglgrt ryiplvilft lailqsckkn pqemsreele shlsserhyk kllefsknig
       61 invekfaatg ekapvfalle eagfghkpal ryteksikad tlilreaaea lvkgesvekv
      121 meklepvfpi ynnlkvhyar likenkpdsa avvaetlnay rwikrqskga prfvmvnirg
      181 ayltamdsag knvlsmrtvv gksdtqtptm dtyatsivth pywnvpksia ikemfpkaas
      241 dpeylsrnri qiidnkgqav npeeidweel taekfpyrfr qdtgednslg llkveiknpl
      301 aiylhdtnar ylfksnsrwr shgcvrvqqp tdlanymagt klldndfmte pdtvstppkw
      361 hklkaripvf llylgadcne kgdllyfedv ykkgspkv
//
LOCUS       WP_235139887             569 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235139887
VERSION     WP_235139887.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 569)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..569
                     /product="AMP-binding protein"
                     /calculated_mol_wt=63246
     Region          10..567
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(216,219..224,226..227)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341259"
     Site            order(219,342..343,364..369,451,463,466,477,556)
                     /site_type="other"
                     /note="putative AMP binding site [chemical binding]"
                     /db_xref="CDD:341259"
     Site            order(219,266..267,315,317..318,321,342..343,364..369,451,
                     463,466,474..477,537)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:341259"
     Site            order(266,317..318,321,342,474..476,531,537)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341259"
ORIGIN      
        1 miaisketyp wlknypegip yeinpdayvs lvemmeisfr enadkpaytn mdmqltfgqv
       61 delsknfaay lqglglvqgd riaiqmpnll qypvammgal raglvivntn plytpremqh
      121 qfkdsgakav vilanfavnl ekiiantniq hiiiteigdl lgfpkklivn avvkyvkkmv
      181 pkyhvpeavs fskalsigag reytrpnvsg idiafiqytg gttgvskgam lthrnlianv
      241 eginewlmsk irrspatgql tivgalplyh vfaltinglc gikwgalnil itnpkdlpaf
      301 vkelkkfkfh ifpglntlfn gllnnpdfss idfselkiti aggmalqkvv aerwekitgc
      361 plvegyglse tspvlsvnpl ddhhksgtig lpfpstemri lkddetwapl gekgeicarg
      421 pqimlgyynr pdetvkvife deggrwfktg digyededgf fkivdrkkdm ilvsgfnvyp
      481 neieevvsqc pgvlevacvg vpdeksgemv kifivkkdpe lteekvkafc kenltgykip
      541 rriefrselp ktnvgkilrr alreeemat
//
LOCUS       WP_235139898             642 aa            linear   BCT 02-MAR-2025
DEFINITION  c-type cytochrome [Dyadobacter fanqingshengii].
ACCESSION   WP_235139898
VERSION     WP_235139898.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012264.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00034.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..642
                     /product="c-type cytochrome"
                     /GO_function="GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=70969
     Region          7..379
                     /region_name="YliI"
                     /note="Glucose/arabinose dehydrogenase, beta-propeller
                     fold [Carbohydrate transport and metabolism]; COG2133"
                     /db_xref="CDD:441736"
     Region          558..642
                     /region_name="CytC552"
                     /note="Cytochrome c551/c552 [Energy production and
                     conversion]; COG4654"
                     /db_xref="CDD:443692"
ORIGIN      
        1 mkkiaqiafa llatmsmlqa qespkeedfy kiitppipeg iilevggltt mpngslaist
       61 rrgevwivdn ptsrtpyfrk fatglheilg laykegalyc aqrgeltkli dkngdgkadv
      121 yetvyawpls ghyheysfgp klapdgsffv sgnvafgdee wwrgesrvpg rgwifhitnd
      181 gkyepyatgv rspagismln gelfytdnqg dwmgtggifq vkkgsfmghp aglkwaansp
      241 vkltekqffa erdnrqnkdd kgraikpent gnetpqflyq lkekydmvql pavwlpygvh
      301 gvstselild ntqgnfgpft gqvfvgdqgq snimrivlek vkgeyqgasi gfrsgfqsgv
      361 lrmafdkdgs mfvgetnrgw gsagdanqgl qrlvwngkmp femytvkaqp dgfeieftmp
      421 vdrksaedld synvssylyk hypvygsppi ntetvkvvgv kvsddakkvr ivldgmrqyy
      481 vhkiqlegvr aatnswslvh tdayytlnni pdgeklkvsd lktarsgkta asvaapekeh
      541 vspdgkgkat tdnagkvptf aevkpllekn tclachaaek kvvgpsyldv akrkysndki
      601 vdliyhpkpe nwpdyatpmp pmpqvskada mkiaswinsl ak
//
LOCUS       WP_235139905             474 aa            linear   BCT 02-MAR-2025
DEFINITION  BamA/TamA family outer membrane protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235139905
VERSION     WP_235139905.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 474)
  AUTHORS   Heinz,E. and Lithgow,T.
  TITLE     A comprehensive analysis of the Omp85/TpsB protein superfamily
            structural diversity, taxonomic occurrence, and evolution
  JOURNAL   Front Microbiol 5, 370 (2014)
   PUBMED   25101071
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013283.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01103.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..474
                     /product="BamA/TamA family outer membrane protein"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /calculated_mol_wt=55371
     Region          <35..474
                     /region_name="BamA"
                     /note="Outer membrane protein assembly factor BamA [Cell
                     wall/membrane/envelope biogenesis]; COG4775"
                     /db_xref="CDD:443807"
ORIGIN      
        1 mnlkrrykti yfplfvllfi qtayaqtvet dttgkvvvgd ilvegnhrtr agiilremav
       61 ktgdtlqags laetleidrr kivntnlfit vdllpkrnpd sirtdirivv kerwyliivp
      121 vfqladrnfn ewwyerkrdl srttygvyms ygnvtgradk lrflaefgfi pkfevaytlp
      181 yidkaqktgi tigssysvnk ttafrtwrdk lqyfnsedin rnrfysyvsi srrnkyytfh
      241 tadlrwsysk isdtiatlnp nyllngrtiq ryfqltytfs ydkrdnvqya lrgqslalql
      301 skigllptdd vnmtyfygsy rkyipiskrw ffntgvrgrv slpkrqpylq tiglgyrndl
      361 vrgyelyvvd gqdyallkne lkyklfsfqk hfsfipvkqf ntlplaayin tfadagyvkn
      421 sypefsntrl gnsmlygaga gldivtfyni larfnltlng kgerrfffnv sref
//
LOCUS       WP_235139795             380 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3179 domain-containing (seleno)protein [Dyadobacter
            fanqingshengii].
ACCESSION   WP_235139795
VERSION     WP_235139795.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 380)
  AUTHORS   Zhang,Y. and Gladyshev,V.N.
  TITLE     High content of proteins containing 21st and 22nd amino acids,
            selenocysteine and pyrrolysine, in a symbiotic deltaproteobacterium
            of gutless worm Olavius algarvensis
  JOURNAL   Nucleic Acids Res 35 (15), 4952-4963 (2007)
   PUBMED   17626042
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022818.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11376.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..380
                     /product="DUF3179 domain-containing (seleno)protein"
                     /calculated_mol_wt=42985
     Region          114..373
                     /region_name="DUF3179"
                     /note="Protein of unknown function (DUF3179); pfam11376"
                     /db_xref="CDD:431852"
ORIGIN      
        1 mrkllylgia giilfeiakv yfimpmpgsq rmnsieiayf lhswrwafri vfwlmiiagc
       61 ttalsgnkkw vtlillffag avtygtnyem aadtmfyqps qvilhnasqn kvkddrlvig
      121 veangeakay piqfigyhhq vrdvlggkpv ivtyctvcrt grvfepiveg kpdefrlvgm
      181 dhfnamfedk ntgswwrqan geaiagplkg qmlpelptaq ttvsqwfklh pnskimqpdp
      241 tyqakydsms ryesgkgkst ltktdttawk ekswvvgvqa gkdskafdwn klvkqrvind
      301 hvgvtpvavv iaadnksffa fqkpagqeia vrndtlyaqn aaynllgkrv sgdgedlkrv
      361 nayqefwhsw rtfhphtqqy
//
LOCUS       WP_235139921             162 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6036 family nucleotidyltransferase [Dyadobacter fanqingshengii].
ACCESSION   WP_235139921
VERSION     WP_235139921.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039330.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19502.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..162
                     /product="DUF6036 family nucleotidyltransferase"
                     /calculated_mol_wt=18560
ORIGIN      
        1 mdlennefvq ftkcaqeqkl eyiviggfal flnglnratn dvdiwinptk engarlvsvf
       61 rcmdldesal aklelldftq pqvfgfegqi diltsihrlf dfsqvfgrsr kfesphgati
      121 hflhlndlre vkllarrpqd irdvimiddf lklqndadsq nd
//
LOCUS       WP_235140070             362 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF551 domain-containing protein [Klebsiella quasipneumoniae].
ACCESSION   WP_235140070
VERSION     WP_235140070.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016343.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04448.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..362
                     /product="DUF551 domain-containing protein"
                     /calculated_mol_wt=39555
     Region          299..357
                     /region_name="DUF551"
                     /note="Protein of unknown function (DUF551); pfam04448"
                     /db_xref="CDD:427954"
ORIGIN      
        1 mtskfsidnk ellqrissge avvgidfgnl ivrelaafrl aamdssesve lpldylqghk
       61 dglewaaklv eanhpetgdw lyddpielak airkgpdmpp vqpaqvvped vrqalskmdd
      121 eiiaeldaee sacraamlha gnspgqsdcc paqncihsaq gvdrpvawhh sakskegnhg
      181 tccfsyassh dfgpryekpq sqphylperl dydralhfls teprkvtpet viggnspvip
      241 egsasmlrrw lafgcgmqna gsqlprnlia eteamladap hdtpalnsvq svvtvpgkwi
      301 pvseripedr tqvilwdaei gevtsghysh kthtfyhcgd aieneithwm appaapqevs
      361 da
//
LOCUS       WP_235140090             229 aa            linear   BCT 02-MAR-2025
DEFINITION  bacteriophage antitermination protein Q [Klebsiella
            quasipneumoniae].
ACCESSION   WP_235140090
VERSION     WP_235140090.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Goliger,J.A. and Roberts,J.W.
  TITLE     Bacteriophage 82 gene Q and Q protein. Sequence, overproduction,
            and activity as a transcription antiterminator in vitro
  JOURNAL   J Biol Chem 262 (24), 11721-11725 (1987)
   PUBMED   3624233
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018074.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06323.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..229
                     /product="bacteriophage antitermination protein Q"
                     /calculated_mol_wt=25990
     Region          5..220
                     /region_name="Phage_antiter_Q"
                     /note="Phage antitermination protein Q; pfam06323"
                     /db_xref="CDD:428887"
ORIGIN      
        1 mtaqylefvr qqlivatadl sgatkgqlva faenaqftat arsrgrkkvy sevkqkmvnp
       61 dgppmsgsqs rakgssialv lpveystasw rrallsleeh qkawllwnys enirwehqet
      121 iarwaweqfs kklagvriak ktvdrlrqli wlaaqdvkae lagretyeyq klaalvgvtp
      181 knwsetfter weemkttlrr ldsdsllqvt rsrsqqkatn ldgslakld
//
LOCUS       WP_235140194             405 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Klebsiella quasipneumoniae].
ACCESSION   WP_235140194
VERSION     WP_235140194.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..405
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=41955
     Region          9..387
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(16..17,20..21,24,56,107..108,110..112,115,135,
                     138..139,142,219,222..223,226..228,231,257,261,314..315,
                     319,323,340,343..344,347..348,351)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mslrslralc ltsffiadvr dglgpflgif ltqrhwqaed igllmtvggv agllatlpag
       61 fitdtsrhkr vllagvclai tlttlllwfs qktsvvalsq vasgicaafv gpliagitlg
      121 ltrqrgfsaq mgkneafnha gnfftaliag aiawywgigg ifilmacttl ftliallair
      181 ssdidddaar glesavtpav pgfailfrht plliagvtlm lfhlanaall pmlsmriaaa
      241 pghlnpglfa aatviisqvv mipvairaag sidkygywrc illallimpi raalaaasda
      301 pammvpvqil dglaagilgv avpsfivsll rgsghvnagq svvmlmqgag aamspaltga
      361 iagrysfata fgvlsvialv alivwwrsap lltnsvsppi gesgq
//
LOCUS       WP_235140199             427 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Klebsiella quasipneumoniae].
ACCESSION   WP_235140199
VERSION     WP_235140199.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019581.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07969.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..427
                     /product="amidohydrolase family protein"
                     /calculated_mol_wt=45594
     Region          16..414
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
     Site            order(76,78,225,257,325)
                     /site_type="active"
                     /db_xref="CDD:238617"
ORIGIN      
        1 mtfssscapl tgisrarlpa walpegwptq angeplladl afrdgriaal tptdqpapgl
       61 wdlagaltlp glvephahld ktftiercrp aqagllpaih amhedrrhwt gadiqrrasa
      121 alaraaangv thlrshidwf ttdapdawqe iarldtggit lervalvplp lfqdpadaea
      181 iaravansge rcllggfihs snwdaaaman llhsaarwkl dldlhideel sevsqgltwl
      241 adhlsrhpfp ghiccshgca laagsdaqaa qilrqlaahg itlialpmtn lllqdatfgr
      301 tprqrgitll heaqaagvat llgcdnvqda fcpagsydpl dtlacglfsa qlsdpfdqqs
      361 rlicdraalt gspadaapfa vgaaasvvif pgsnrytwpl nsaarlvvnh grlthrrvwq
      421 eemahes
//
LOCUS       WP_235140379            1408 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA translocase FtsK 4TM domain-containing protein [Klebsiella
            quasipneumoniae].
ACCESSION   WP_235140379
VERSION     WP_235140379.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 1408)
  AUTHORS   Lowe,J., Ellonen,A., Allen,M.D., Atkinson,C., Sherratt,D.J. and
            Grainge,I.
  TITLE     Molecular mechanism of sequence-directed DNA loading and
            translocation by FtsK
  JOURNAL   Mol Cell 31 (4), 498-509 (2008)
   PUBMED   18722176
REFERENCE   2  (residues 1 to 1408)
  AUTHORS   Sivanathan,V., Allen,M.D., de Bekker,C., Baker,R.,
            Arciszewska,L.K., Freund,S.M., Bycroft,M., Lowe,J. and
            Sherratt,D.J.
  TITLE     The FtsK gamma domain directs oriented DNA translocation by
            interacting with KOPS
  JOURNAL   Nat Struct Mol Biol 13 (11), 965-972 (2006)
   PUBMED   17057717
REFERENCE   3  (residues 1 to 1408)
  AUTHORS   Massey,T.H., Mercogliano,C.P., Yates,J., Sherratt,D.J. and Lowe,J.
  TITLE     Double-stranded DNA translocation: structure and mechanism of
            hexameric FtsK
  JOURNAL   Mol Cell 23 (4), 457-469 (2006)
   PUBMED   16916635
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024882.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13491.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1408
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..1408
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /calculated_mol_wt=153201
     Region          1..1408
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
ORIGIN      
        1 msqeytedke vkltklssgr rlleamlilc slfaiwlmaa llsfnpsdps wsqtawhepi
       61 hnlggapgaw ladtlffifg vmaytipvii iggcwfawrh qendeyidyf avslrligal
      121 aliltscgla ainaddiwyf asggvigsll sttlqpllhs sggtiallci waagltlftg
      181 wswvsiaekl gggilsvltf asnrtrrddt wvdegeyedd deeyddeeaa tpqesrrari
      241 lrsalarrkr laekftnpmg rktdaalfsg krmddgeeav qysasgapva addvlfsgas
      301 aarpaendvl fsgasaarpg dfdlydplln gqsiaepvga aaaataapqp waespaghqg
      361 aapvyqpeag yppqpyqpep apyqqpayap hagqpapqay qpepvqyqqp vydpyagqpa
      421 pqgyqpepap yqqpvydpya gqpapqgyqp epapyqqpvy dphagqpapq ayqpepvqyq
      481 qpvydphavq papqgyqpep apyqqpvydp hvaqpapqgy qpepapyqqp vydphvaqpa
      541 pqgyqpepap yqqpaydpha gqpapqayqp epapvpaaqp epevvqeevk rpplyyfeev
      601 eekrarerel laswyqpipe pespiatkpl tppaspskpp vestvvsava agvhqataas
      661 ggaaaaktat aasaataplf spassgprvq vkegigpklp rpnrvrvptr relasygikl
      721 psqreaeqra rqaerdphyd dellsdeead ameqdelarq faatqqqryg hrwedenatd
      781 dddadaaaea elarqfaatq qqryaseqpp ganpfspady efspmktlvn egpseplftp
      841 tpevqpqqpa qhyqqpaaap qqgyqpaqhq pvhpqpvpqq pvapqghqpa apapqeslih
      901 pllmrngdsr plqkpttplp sldlltppps evepvdtfal eqmarlvear ladfrikadv
      961 vnyspgpvit rfelnlapgv kaarisnlsr dlarslstva vrvvevipgk pyvglelpnk
     1021 krqtvylrev ldnskfrdnp spltvvlgkd iagdpvvadl akmphllvag ttgsgksvgv
     1081 namilsmlyk aqpedvrfim idpkmlelsv yegiphllte vvtdmkdaan alrwsvneme
     1141 rryklmsalg vrnlagynek iaeaarmgrp ipdpywkpgd smdavhpvle klpyivvlvd
     1201 efadlmmtvg kkveeliarl aqkaraagih lvlatqrpsv dvitglikan iptriaftvs
     1261 skidsrtild qggaesllgm gdmlysgpns ttpvrvhgaf vrdqevhavv qdwkargrpq
     1321 yvdgitsdse segggggfdg geeldplfdq avsfvtekrk asisgvqrqf rigynraari
     1381 ieqmeaqgiv seqghngnre vlapppfe
//
LOCUS       WP_235140447             494 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein [Klebsiella quasipneumoniae].
ACCESSION   WP_235140447
VERSION     WP_235140447.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 494)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..494
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=52931
     Region          19..494
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     Site            order(165..169,177,192,194..195,243..246,249,252..253,
                     267..269,301,398,400,426,464)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143395"
     Site            order(169,267,298,301)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143395"
ORIGIN      
        1 mseitllaev taflrqphgq fiagereagr gapfavinpa tgraiaevta adsdqadrav
       61 esarqafnqw remptlargt lllkladala ehrealaqle slcsgktitl armleldqsv
      121 aflryfagwa gkvtgetlnv slpsmageky taftrrqplg vvvgivpwnf simiavwkle
      181 aalvcgctiv lkpseytplt llrvaelaka vgipdgvinv vngaggeiaq rlithpacak
      241 vsftgsvatg ekvqrsasas gkrvtlelgg knaalflddl tpeamvngil eagylnqgqi
      301 caaaerfylp qgkldavlal lkdklsafap gspldertlm gplanrqqyd kvlrliqtar
      361 degdtivcgg ealpgegyfl qptavkvrse estlmreetf gpvcsfigyh sedealarin
      421 aspyglaasv wsdnirlalr yseaieagiv wvnmhtfldp avpfggmkgs gigrefgsaf
      481 iddytelksv mvry
//
LOCUS       WP_235140456              91 aa            linear   BCT 02-MAR-2025
DEFINITION  phage baseplate plug family protein [Klebsiella quasipneumoniae].
ACCESSION   WP_235140456
VERSION     WP_235140456.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 91)
  AUTHORS   Yang,F., Jiang,Y.L., Zhang,J.T., Zhu,J., Du,K., Yu,R.C., Wei,Z.L.,
            Kong,W.W., Cui,N., Li,W.F., Chen,Y., Li,Q. and Zhou,C.Z.
  TITLE     Fine structure and assembly pattern of a minimal myophage Pam3
  JOURNAL   Proc Natl Acad Sci U S A 120 (4), e2213727120 (2023)
   PUBMED   36656854
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046292.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22479.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..91
                     /product="phage baseplate plug family protein"
                     /calculated_mol_wt=9828
ORIGIN      
        1 mttdtytfts neresvaftp tldgtvyncq vkwniaaqrw yilitdnsgn tmlntpavgs
       61 tngtginlia gvfsgttmiw reqngvievt s
//
LOCUS       WP_235140468             129 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2570 family protein [Klebsiella quasipneumoniae].
ACCESSION   WP_235140468
VERSION     WP_235140468.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022284.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10828.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..129
                     /product="DUF2570 family protein"
                     /calculated_mol_wt=13396
     Region          7..>94
                     /region_name="YidC_periplas"
                     /note="YidC periplasmic domain; cl24006"
                     /db_xref="CDD:474124"
ORIGIN      
        1 msrltaiisa iviclvvflg wlamhyhnaa aeqktradga eqqvnaaqai tsnvlttmti
       61 fntiveanqh akeqialdas gasadirvav anddctnrpv pagavkrlqq fanglrqsag
      121 gpvtgepdg
//
LOCUS       WP_235139420             595 aa            linear   BCT 02-MAR-2025
DEFINITION  NRDE family protein [Dyadobacter fanqingshengii].
ACCESSION   WP_235139420
VERSION     WP_235139420.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter fanqingshengii
  ORGANISM  Dyadobacter fanqingshengii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 595)
  AUTHORS   Hovav,R., Chehanovsky,N., Moy,M., Jetter,R. and Schaffer,A.A.
  TITLE     The identification of a gene (Cwp1), silenced during Solanum
            evolution, which causes cuticle microfissuring and dehydration when
            expressed in tomato fruit
  JOURNAL   Plant J 52 (4), 627-639 (2007)
   PUBMED   17877702
REFERENCE   2  (residues 1 to 595)
  AUTHORS   Bard,F., Casano,L., Mallabiabarrena,A., Wallace,E., Saito,K.,
            Kitayama,H., Guizzunti,G., Hu,Y., Wendler,F., Dasgupta,R.,
            Perrimon,N. and Malhotra,V.
  TITLE     Functional genomics reveals genes involved in protein secretion and
            Golgi organization
  JOURNAL   Nature 439 (7076), 604-607 (2006)
   PUBMED   16452979
REFERENCE   3  (residues 1 to 595)
  AUTHORS   Halford,S., Wilson,D.I., Daw,S.C., Roberts,C., Wadey,R., Kamath,S.,
            Wickremasinghe,A., Burn,J., Goodship,J., Mattei,M.G. et al.
  TITLE     Isolation of a gene expressed during early embryogenesis from the
            region of 22q11 commonly deleted in DiGeorge syndrome
  JOURNAL   Hum Mol Genet 2 (10), 1577-1582 (1993)
   PUBMED   8268909
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017551.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05742.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Dyadobacter fanqingshengii"
                     /db_xref="taxon:2906443"
     Protein         1..595
                     /product="NRDE family protein"
                     /calculated_mol_wt=67802
     Region          1..>130
                     /region_name="TANGO2"
                     /note="Transport and Golgi organization 2; cl01315"
                     /db_xref="CDD:470157"
     Region          <329..529
                     /region_name="LysX"
                     /note="Glutathione synthase, LysX or RimK-type ligase,
                     ATP-grasp superfamily [Amino acid transport and
                     metabolism, Coenzyme transport and metabolism,
                     Translation, ribosomal structure and biogenesis, Secondary
                     metabolites biosynthesis, transport and catabolism];
                     COG0189"
                     /db_xref="CDD:439959"
ORIGIN      
        1 mctvtyipae nsifltsnrd eridrapavp pecycvnkie miypkdaqag gtwivlngdr
       61 saavllnggf knhfyqtpyr ksrglimldi mstnspadhf qamdlkaiep ftiilltqgr
      121 lrrctwdgdh khlteldatk phiwasvtly drdmqlqren aliqwlketr qvkpeavadf
      181 hlganmryet snaphnanir tvsvtmlals tdrrasvlhh dlhsgevaak rmqtqapgtp
      241 llfnsfywkt rrfwirlrhw eywpfaclyl plvplwlwls lrarsllffs aanpgiaysg
      301 fiqerksdiy pllpeglypk gvlcktgmsa geinsvlres sldfpliakp digergiqve
      361 llrkpadlaa yrsrskvdfl lqeyidyshe igifyyripg nkngqlsgiv gkeflsvtgd
      421 gqtsllsllm qndravlqlh alaavfgdqf dnipdsgeil tlvpygnhsr gsrfidlhsr
      481 itpgltdmid kvctqvpgfy fgrldirfkn weeleagrhf siielngtgs epthiydpah
      541 slffawkeiy rhwkivfkis minahngkqp lmslkeglem krahdkhlnl mqalh
//
LOCUS       WP_235140638             242 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Klebsiella
            quasipneumoniae].
ACCESSION   WP_235140638
VERSION     WP_235140638.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025107.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13730.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..242
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=26570
     Region          18..65
                     /region_name="HTH_36"
                     /note="Helix-turn-helix domain; pfam13730"
                     /db_xref="CDD:463970"
     Region          160..216
                     /region_name="DnaT"
                     /note="DnaT DNA-binding domain; cl46275"
                     /db_xref="CDD:480615"
ORIGIN      
        1 mslmakamgv kvgnslrklv likladnand kgecwpsyqh iadqcecsks avrnhidale
       61 dmgllkrenr vgvnngkgnt snvyylnlda tpmtskstgv cheiappmps dgtppmppdg
      121 trtshsfepv tepdslsarg qfiseaakrr igvspngeip fppafkpsad hiaiasekgi
      181 nietellnfr dyhqargtkl idwnsafrvw lrnarvnpls ghqrsepdsp hwnspegwkd
      241 fi
//
LOCUS       WP_235140781             235 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Klebsiella pneumoniae].
ACCESSION   WP_235140781
VERSION     WP_235140781.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 235)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 235)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..235
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=25608
     Region          8..235
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(13,15..16,18,37..39,88..90,139..141,157,161,
                     187..190)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187586"
     Site            order(115,141,157,161)
                     /site_type="active"
                     /db_xref="CDD:187586"
ORIGIN      
        1 mksdqhntil ivgasrglgh amaatflqhg wevigtvrdl sshtplhdla kthplrlrla
       61 tldirdeaql aalqatlppa sldmlfvnag ttnrdpsqii gdvsteefyq vmltnaqapm
      121 rvierlqqav kpqgllgvms sgqgsltnnl tgqrelyrgs kaalnmfmrs faarpssash
      181 plvvmapgwi rtelggadap ltieetiprl vnvlldkrqr pgleyldyqg rtvpw
//
LOCUS       WP_235140787             210 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Klebsiella
            pneumoniae].
ACCESSION   WP_235140787
VERSION     WP_235140787.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 210)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 210)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 210)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 210)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..210
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=23200
     Region          1..210
                     /region_name="YnjD"
                     /note="ABC-type uncharacterized transport system YnjBCD,
                     ATPase component [General function prediction only];
                     COG4136"
                     /db_xref="CDD:443311"
ORIGIN      
        1 mltvnhltls vrrqpllrev afsvapgevl tlmgpsgsgk stlfawmiga lsgdfrarge
       61 lwlnerrcdt lptehrrigi lfqapllfdh fsvgqnlqla lpenvrgear kaaveealsr
      121 aglagfaprd patlsggqra rvsllralla rpeallldep fsrldaslra gfrrwvfeel
      181 drqaipailv thdredcppt grclamerwq
//
LOCUS       WP_235140911             304 aa            linear   BCT 02-MAR-2025
DEFINITION  ROK family protein [Klebsiella pneumoniae].
ACCESSION   WP_235140911
VERSION     WP_235140911.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..304
                     /product="ROK family protein"
                     /calculated_mol_wt=32239
     Region          3..293
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mlhlgidigg tkmeavlqdp agecvqrlrr pthkesydaf mrqlltliad iravspqpft
       61 lgiglpgaid pqsgrikncn clvlnghdlr rdimqqlgqp vwmandadcf tlseavdgag
      121 agattvfgvi igtgcgggia vhqqllsgpn aiagewghnp lpgytperdg ppqpcycgkt
      181 nciesflsgt gfarrygeqa raeaivaaaq ngdpralahw rhfidafars lasvinildp
      241 qvivlgggls nvsqiyrdlp aaivpwifsd tcrtqikpar fgdasgvrga awlprlpgaa
      301 qgqr
//
LOCUS       WP_235140645             148 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome c-type biogenesis protein [Klebsiella quasipneumoniae].
ACCESSION   WP_235140645
VERSION     WP_235140645.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 148)
  AUTHORS   Thony-Meyer,L., Ritz,D. and Hennecke,H.
  TITLE     Cytochrome c biogenesis in bacteria: a possible pathway begins to
            emerge
  JOURNAL   Mol Microbiol 12 (1), 1-9 (1994)
   PUBMED   8057830
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10511314
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..148
                     /product="cytochrome c-type biogenesis protein"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /calculated_mol_wt=16358
     Region          3..142
                     /region_name="CcmH"
                     /note="Cytochrome C biogenesis protein; pfam03918"
                     /db_xref="CDD:461092"
     Site            order(40,43)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:319866"
ORIGIN      
        1 mgillalmlt gqawaaidtw qfkdeaqeqa freitsqlrc pkcqnnsiad snamiaadmr
       61 qkvyelmqqg ktkgqivdym varygnfvsy eppltagtvl lwlgpglfvl agagviiara
      121 rrrdipdaal saeerqrlae llkegker
//
LOCUS       WP_235140948             268 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2950 family protein [Klebsiella pneumoniae].
ACCESSION   WP_235140948
VERSION     WP_235140948.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022892.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11453.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..268
                     /product="DUF2950 family protein"
                     /calculated_mol_wt=29394
     Region          22..265
                     /region_name="DUF2950"
                     /note="Protein of unknown function (DUF2950); pfam11453"
                     /db_xref="CDD:431889"
ORIGIN      
        1 mrnplsvalf tlmlsplaaf aqqqfatpeq aatalaeais qpneaalsev lgdnwqqflp
       61 tdgidpaavd rfqrdwqvkh viiqqggkaw ldvgseswrl pvpivktseg wrfdmaagee
      121 eiltraigrn elsaiaamha yvdaqqdyyh lnhrwaqkii ssegkkdgly wptspgeaps
      181 plgpafsptv pgsgyhgyrf riiagrddqs vallawpiaw getgvmsfmi dqqdrvyqan
      241 lgeesaakaq eitrftpdad agwqvaep
//
LOCUS       WP_235140660             396 aa            linear   BCT 02-MAR-2025
DEFINITION  FKBP-type peptidyl-prolyl cis-trans isomerase N-terminal
            domain-containing protein [Klebsiella quasipneumoniae].
ACCESSION   WP_235140660
VERSION     WP_235140660.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 396)
  AUTHORS   Saul,F.A., Arie,J.P., Vulliez-le Normand,B., Kahn,R., Betton,J.M.
            and Bentley,G.A.
  TITLE     Structural and functional studies of FkpA from Escherichia coli, a
            cis/trans peptidyl-prolyl isomerase with chaperone activity
  JOURNAL   J Mol Biol 335 (2), 595-608 (2004)
   PUBMED   14672666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013509.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01346.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..396
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase
                     N-terminal domain-containing protein"
                     /GO_process="GO:0006457 - protein folding [Evidence IEA]"
                     /calculated_mol_wt=42781
     Region          <17..>173
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          180..395
                     /region_name="PRK10902"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     Provisional"
                     /db_xref="CDD:236791"
ORIGIN      
        1 mtnrlaaaek tqqtafdqvk alnadkqslt nrlaatektq qtaldqvkal nadkqslvnr
       61 laaaektqqt aldqvkvlna dkqtlanrla aaektqqtal dqvkalnadk qllanrlaav
      121 ekapssrada avavkdepse taaivaayrl qadkdnaqlr mkedeiqllr tqltvpprnt
      181 tgktaaklsa pgeqqayaig asmgtealnv lttrrtqgvn vdaglvlqgi edafsgqlrl
      241 geqernkalf disqqvfqnl nkieqknisa gkkyqqafar kkdvvfkegv ysridypgkg
      301 kisgndlvtv vikemltdgt vindmetkdq altqkldayp pvfrgplkrl qnhgsvtlvv
      361 ppdkaygskg lppkippgat mvysvrivds qpapak
//
LOCUS       WP_235141031             162 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Klebsiella pneumoniae].
ACCESSION   WP_235141031
VERSION     WP_235141031.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 162)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07883.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..162
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=18555
     Region          27..131
                     /region_name="cupin_SPO2919-like"
                     /note="Silicibacter pomeroyi SPO2919 and related proteins,
                     uncharacterized sugar phosphate isomerase with a cupin
                     domain; cd02224"
                     /db_xref="CDD:380353"
     Site            order(34,39..41,43,45,65..66,68,70,80,90..96,101,116,118,
                     120)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:380353"
     Site            order(56..57,60,62,67,103..105)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380353"
ORIGIN      
        1 mkrpdcichw relegpddat ypdsperfsi gaplgrglrl nrlgihherl ppgrrtsyph
       61 aesdeeefiy vlegypevwi ngylwklepg dsvgfpagtg ichtflnnte qevrllvvge
      121 ankkynriyy plnpgyaatr qdrwvdhppq ffgphdgkpr kk
//
LOCUS       WP_235141073             302 aa            linear   BCT 02-MAR-2025
DEFINITION  BapA/Bap/LapF family prefix-like domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_235141073
VERSION     WP_235141073.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 302)
  AUTHORS   Yoshida,K., Toyofuku,M., Obana,N. and Nomura,N.
  TITLE     Biofilm formation by Paracoccus denitrificans requires a type I
            secretion system-dependent adhesin BapA
  JOURNAL   FEMS Microbiol Lett 364 (4) (2017)
   PUBMED   28158695
REFERENCE   2  (residues 1 to 302)
  AUTHORS   Latasa,C., Roux,A., Toledo-Arana,A., Ghigo,J.M., Gamazo,C.,
            Penades,J.R. and Lasa,I.
  TITLE     BapA, a large secreted protein required for biofilm formation and
            host colonization of Salmonella enterica serovar Enteritidis
  JOURNAL   Mol Microbiol 58 (5), 1322-1339 (2005)
   PUBMED   16313619
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046917.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22783.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>302
                     /product="BapA/Bap/LapF family prefix-like
                     domain-containing protein"
     Region          4..66
                     /region_name="biofilm_BapA_N"
                     /note="BapA prefix-like domain; NF033677"
                     /db_xref="CDD:411274"
ORIGIN      
        1 mkninitakd tgvkytvdgn qvnlntqsvv vlhikredis sfsrqgndlv lkindgstlt
       61 lkdffvndan ghhsdlvlqd ddsgalwwle gagtsdahys lisdisglla agssggsiap
      121 wvmagaallg igamiagssd kdhsshspnd dtdsdadsds dsdsdsdtdp ggsesdadad
      181 sdtdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd
      241 sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsesdsdsa sgsdsdsdsd sdsdsdsdsd
      301 ad
//
LOCUS       WP_235141130             166 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6702 family protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141130
VERSION     WP_235141130.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042765.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20420.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..166
                     /product="DUF6702 family protein"
                     /calculated_mol_wt=19525
     Region          16..156
                     /region_name="DUF6702"
                     /note="Domain of unknown function (DUF6702); pfam20420"
                     /db_xref="CDD:466569"
ORIGIN      
        1 mqklllaftl flfslspakn lhpyhvgsve fnynvksktf qitgkffldd lenalkekyg
       61 kavhfndiry kqqindylkk ycgeylklka dnqqlkinyl gfeedsesvn iflesdpsnt
      121 pkkvetavsf lynyfddqmn iihiivdgkr qsdrlnypnr ylfkmf
//
LOCUS       WP_235141138             279 aa            linear   BCT 02-MAR-2025
DEFINITION  CsgG/HfaB family protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141138
VERSION     WP_235141138.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 279)
  AUTHORS   Loferer,H., Hammar,M. and Normark,S.
  TITLE     Availability of the fibre subunit CsgA and the nucleator protein
            CsgB during assembly of fibronectin-binding curli is limited by the
            intracellular concentration of the novel lipoprotein CsgG
  JOURNAL   Mol Microbiol 26 (1), 11-23 (1997)
   PUBMED   9383186
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03783.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..279
                     /product="CsgG/HfaB family protein"
                     /GO_component="GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA]"
                     /calculated_mol_wt=30922
     Region          <25..>152
                     /region_name="CsgG"
                     /note="Curli biogenesis system outer membrane secretion
                     channel CsgG [Cell wall/membrane/envelope biogenesis];
                     COG1462"
                     /db_xref="CDD:441071"
ORIGIN      
        1 mrlrfflltv fflilkinaq hnddrmvvgv saftcdennr fvglvtekvv emltntkrfr
       61 vvdrtsmekv neelelqkse afidsknlve qganlaaekl itghitkipv yamknsvgti
      121 ngykasvafq mkvvdvssgl stdatsfegk asdlmlspes avqqamrsvq neihqyfkin
      181 falvgkivki lpiddknklk vllnvgknsg ikvgdkftve svemienqky pqkigvleiv
      241 nlagenlsea lisdkksiaq itadfeakkl vectlilkn
//
LOCUS       WP_235141272             132 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5675 family protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141272
VERSION     WP_235141272.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040141.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18925.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..132
                     /product="DUF5675 family protein"
                     /calculated_mol_wt=15118
     Region          5..120
                     /region_name="DUF5675"
                     /note="Family of unknown function (DUF5675); pfam18925"
                     /db_xref="CDD:465915"
ORIGIN      
        1 mevqlirtyh pegangilff egkqlcrtie lpwqdnrprv scipegryil rkrqsprfhw
       61 hfevmgvpqr syilfhaane akkelrgcia pvlqhtgagr gsgsrpaler mkdclypild
      121 sgyevtliik ke
//
LOCUS       WP_235141277             163 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141277
VERSION     WP_235141277.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024898.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13508.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..163
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=18295
     Region          <78..161
                     /region_name="yhbS"
                     /note="Predicted N-acetyltransferase YhbS [General
                     function prediction only]; COG3153"
                     /db_xref="CDD:442387"
ORIGIN      
        1 miellnkkhn redfncgkdl ltnylraqag qdikrklsac fvlsengtgi qgyytlsnns
       61 islssfsehi qkklprsyna vpttllgrla idkkhqgkgl gkiflidalk rcyeiskeig
      121 sfavvvdpid eeaekfykky dfiklptsqk vfiaaktlqe lfg
//
LOCUS       WP_235141284              83 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6520 family protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141284
VERSION     WP_235141284.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039804.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20130.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..83
                     /product="DUF6520 family protein"
                     /calculated_mol_wt=8697
     Region          1..>62
                     /region_name="DUF6520"
                     /note="Family of unknown function (DUF6520); pfam20130"
                     /db_xref="CDD:466297"
ORIGIN      
        1 mkkfilpval fvfgagaafa tntakpgeaa tengyritsn pmepcqktev kcstipsqel
       61 ctdgsvtlhr igetscgsdl fkl
//
LOCUS       WP_235141285             501 aa            linear   BCT 02-MAR-2025
DEFINITION  MauE/DoxX family redox-associated membrane protein [Kaistella sp.
            97-N-M2].
ACCESSION   WP_235141285
VERSION     WP_235141285.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 501)
  AUTHORS   van der Palen,C.J., Reijnders,W.N., de Vries,S., Duine,J.A. and van
            Spanning,R.J.
  TITLE     MauE and MauD proteins are essential in methylamine metabolism of
            Paracoccus denitrificans
  JOURNAL   Antonie Van Leeuwenhoek 72 (3), 219-228 (1997)
   PUBMED   9403107
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018942.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07291.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..501
                     /product="MauE/DoxX family redox-associated membrane
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0030416 - methylamine metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=57316
ORIGIN      
        1 mkataarwas yfftllfvya afsklldfen fqtqmaqspl lsayagwasi gilalelmtv
       61 lllvwdktrr vglyasfglm taftlyiyli lnyaenipcs cggifekmsw dqhllfnitg
      121 vllallgivf irkedargwi rsavatvlta vvsggsiial ffsseylmkr enafirrfpq
      181 hpvteertfd vkvnsyyfag fdrnylylgn ltspfrlrki nfqlnaertm fikpkmtvqf
      241 hqpprlhvmn qhfffydgsa pviyrgktda peaellmykn ayfnqlvvld sahfafrtiv
      301 pqskhfavgt lgfnsqqgmi ihknflpgkv sslfetdgql ltdpvnqdvv ylysyqnryt
      361 vgnrylqktq tyntivkagl qhmkyrtmkn gdkrletppl klsgtaavyg nvlftvsalm
      421 gryeprkawk eanivdmyst agqeylgsiy lyhhgqgkit dmvitgdylf vlrdalitry
      481 rlntaitkhf rtgevenlkk e
//
LOCUS       WP_235141291            1751 aa            linear   BCT 02-MAR-2025
DEFINITION  PA14 domain-containing protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141291
VERSION     WP_235141291.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 1751)
  AUTHORS   Rigden,D.J., Mello,L.V. and Galperin,M.Y.
  TITLE     The PA14 domain, a conserved all-beta domain in bacterial toxins,
            enzymes, adhesins and signaling molecules
  JOURNAL   Trends Biochem Sci 29 (7), 335-339 (2004)
   PUBMED   15236739
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07691.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1751
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..1751
                     /product="PA14 domain-containing protein"
                     /calculated_mol_wt=185449
     Region          71..1297
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          456..>673
                     /region_name="Chi1"
                     /note="Chitinase [Carbohydrate transport and metabolism];
                     COG3469"
                     /db_xref="CDD:442692"
     Region          708..831
                     /region_name="PA14"
                     /note="PA14 domain; pfam07691"
                     /db_xref="CDD:400161"
     Region          1687..1751
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mkkidllikk gidflknsat vlfeipkktn kniflafvll iafntsvysq csytaltnpn
       61 pkvgedytfc idnvntiatp avhagqyvvv nvvqgfnytf svgdiftsqe nltlfnaenn
      121 snnglgttsy nsgnigayin wtstfsgkvk iqlsrascdn tindrngslt lklnnignkk
      181 ddqtltntdk wighvynlss gtgippggns setptasdpf vnsnyvgyys taneeinegf
      241 ggdnacflvt saattiytek favryrmnsk rpagyyfinv tgddgvrayv dgvlvvnewr
      301 eqgatsycdn liylngnsnl ildyyenggq nvvkftlkpf vennnpniit gstsynlcsg
      361 sspgtlsanp ytpscganps rpnvgyqwqt ssdnvlwtdi nsagnlqnyd vpalspltnt
      421 vryyrrlvks rgsndatggv vsniitvntn aatvggavng gtticsgvss gvltlsgqtg
      481 nvvrwesapn asgpwspipn tnstyisgpl tqttlfravv qngacavats ssttvtvnpa
      541 pllttqptal ticentsgsf svvtsatnpt yqwqyskdnt nwtnisatlg pnatnyttat
      601 vtfsntpfay ngyyirclvs astscttisn avlltvnpkl saptigtvtq ptcstatgst
      661 vlnglpvgsw lltrnpgnvt iagtgtsati tglvagtsyt fsvnsftngl kadyfknitl
      721 ggpptltrtd ptinfdwgng spdtvipvdg fsarwsglvq piysenytfs tlsddgirlw
      781 vngvklidnw ndhspitntg silltagvky diileyyena ggavsklsws stsqslqiip
      841 taqlftvsgc dsppsanvvi npqpatpdap tvttttptcs iqgtakinny iatnsyifsp
      901 tgptvgnggv isglvpgtsy tvtttdgnct svasasfsva aklttpeapt vtttaptcsi
      961 qgtakinnyi atnsyifspt gptvgnggvi sglevgtnyt vttgngscis ptsspfkvea
     1021 qlaassasvs ivsstsdavc agssvtftal ptnggtlpiy qwqlnntdii gansstyttt
     1081 dltnndkinv vmisnaspcs igspatsnvv tivvkpimia svsisvptni icegtpssft
     1141 ftaspthggt apsyqwkvng nnkgdnssvf attellkgdv itvemtsndt scllnthvts
     1201 esitietktt lyknitgwti eptptlsaei qanysssvnl evcalkitnn avvkintgny
     1261 fkiqndldvs tgtltvesda nliqvnpiav nkgiitvkrd lkfsaarqqy nylispvknv
     1321 sltdiyknae ggpvkvpfvl yhneannkfy nssgayiagr alavkeataa afpvgagpim
     1381 katftgepvn gnlpytlvns kpedsnrgfn lignpypsnl dldafynena ehlsptfnfw
     1441 dstandtyiq agdgypgqay aqwnaatppg egsgtkatgd itstkeptgf vkvgqgfmar
     1501 ttaaskiitf kntmrskevs qgffgkgarg avpfdrywln mtspsnitsq iamvyfeggd
     1561 ngytkedsrs lggsdaiysi vegqqising knscvntdvq plgskhfvsg nytialgeql
     1621 dgvfangqsi ylkdkqvgii tnlsqgsytf aanagestgr feiiyqpetv latdgvtken
     1681 llvyrdgsdf vvksstkkit siqvldtsgr lilslqpnei marikadsls ngiyflrieq
     1741 gnqvsakkii k
//
LOCUS       WP_235141299             389 aa            linear   BCT 02-MAR-2025
DEFINITION  right-handed parallel beta-helix repeat-containing protein
            [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141299
VERSION     WP_235141299.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024627.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13229.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..389
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /calculated_mol_wt=43683
     Region          <164..>271
                     /region_name="Pgu1"
                     /note="Polygalacturonase [Carbohydrate transport and
                     metabolism]; COG5434"
                     /db_xref="CDD:444185"
ORIGIN      
        1 mtkisrklnl iillfiisnv naqvfsnknv penilktyrt qrcddkvdsq iltsatdiik
       61 ylpqgfsqkg didytdylqk gidnhsvvll pnfpiavnpn giklksnskv ifqtntllkl
      121 lpnnkntyhi llidgvknid iynaniegdr dqhldtqgew gmgiwikhse ninlyspkvt
      181 ncwgdgiyig nqknitskni finyafvdnn rrngisiisg enitiknaiv sntngtepea
      241 gvdiepntnn ddvkniiien lytfnnakrg llmvfdnlig dkqkninvlv nkhkdygsdi
      301 aleffvdrgf kkipdnklsg niivndlnyq nnskapiatn pgkrsnvnlg lknvvfvdkk
      361 nkkyklttkk nkelseslkk gekliisgl
//
LOCUS       WP_235141337             153 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141337
VERSION     WP_235141337.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 153)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025054.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13673.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..153
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=17579
     Region          4..134
                     /region_name="PhnO"
                     /note="N-acetyltransferase, GNAT superfamily (includes
                     histone acetyltransferase HPA2) [Transcription, General
                     function prediction only]; COG0454"
                     /db_xref="CDD:440222"
ORIGIN      
        1 mehiiieraa aadhsvltpi sfeskafwgy staqletwke dliitpeyis qnhvykmvln
       61 shiigfysfi risddhiile hlfvrpehig kgfgknlldh flkiaedlks ksitleadph
      121 aesfykkfgf ttfgfkessv agrflpemiy hfk
//
LOCUS       WP_235141347             262 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141347
VERSION     WP_235141347.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 262)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..262
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=29818
     Region          14..245
                     /region_name="PRK10673"
                     /note="esterase"
                     /db_xref="CDD:182637"
ORIGIN      
        1 meilhskiyg qdysgtpllv fhglfgmldn wgsfgkemsa lfpvhlidlr nhgksfhspe
       61 mshddlahdi lhymefhkle kcnllghslg gkavmqfaik yplkvekliv vdiapkaypp
      121 hhqgilkalq svdfekittr qeaeevleqy ipeksviqfl akslywtedk slnwrfnlkt
      181 laekysefvs naikfgvftg ptlfisggns nyilpqdefq ikqqfpnasi vtvknaghwv
      241 qaenptdfne lvkdflsepk dh
//
LOCUS       WP_235141453             524 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4270 family protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141453
VERSION     WP_235141453.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025458.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14092.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..524
                     /product="DUF4270 family protein"
                     /calculated_mol_wt=57130
     Region          39..472
                     /region_name="DUF4270"
                     /note="Domain of unknown function (DUF4270); pfam14092"
                     /db_xref="CDD:433711"
ORIGIN      
        1 minniqrlfk itaalvigsv mlwscepdad qlgsqffqng aqgtealfpv iaynvnngds
       61 irtdavrlns aalgafsepq fglqkaayvt qvrlssyapn fgtnpvidsa vmvikpvyaa
      121 dslttttved yiypdgavpa kkvvvsypvt kygntklnnr tifnikvnev neflgssadq
      181 vrsnkivttg evigskvfng ditsititkd sdnstlfera aslripldst ffqnkivnaa
      241 annlsdaatf iryfkglkis vdendgyifn idpnsiqvnl yykkdkvdgt tttresaiya
      301 ldlgsanahf sqitfdrast psaaalasan lqtgdarifa qgmggpgigi rvplqtvnti
      361 kdlykndkag iisakiriyt akdnwdnsyk kpdnfvvrqr dltpetgepv ylndfltdms
      421 tlaytglynl vkaydldknp ahydigitqt fkdiiekeak nndlvlnvgn yttdpagnll
      481 gfqysalgqq nfnsrsftpy ravfvgtdag nenaaqlilt ygkk
//
LOCUS       WP_235141457             307 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-dependent oxidoreductase [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141457
VERSION     WP_235141457.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Dengler,U., Niefind,K., Kiess,M. and Schomburg,D.
  TITLE     Crystal structure of a ternary complex of D-2-hydroxyisocaproate
            dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate
            at 1.9 A resolution
  JOURNAL   J Mol Biol 267 (3), 640-660 (1997)
   PUBMED   9126843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02826.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..307
                     /product="NAD(P)-dependent oxidoreductase"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
                     /calculated_mol_wt=34027
     Region          3..301
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(154..156,158,176..178,207..208,232)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:240631"
ORIGIN      
        1 mkfkklvale plnlipsaek slhsfaenvi iyndrpanve eivarigdad avlvsytttl
       61 gresleqcsl lkyigmccsl yspesanvdi pfansrgitv tgirdygdeg vveyvvseli
      121 rclhgfgnnk dgtsrkpwre ipreitglkv giiglgksgg miadalqffg aeisyfsrtr
      181 kaeqekkgfk flplnvlleq nevlvtclnk ntvllheaef khlgirkilf ntglspawee
      241 epfvkwllkd nlvycdtvga lgseklvdhp nvvcmevssg rtqqafirls ekvlanithh
      301 lkkqlat
//
LOCUS       WP_235141476             322 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4861 family protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141476
VERSION     WP_235141476.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027479.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16153.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..322
                     /product="DUF4861 family protein"
                     /calculated_mol_wt=36080
     Region          <31..319
                     /region_name="DUF4861"
                     /note="Domain of unknown function (DUF4861); pfam16153"
                     /db_xref="CDD:435173"
ORIGIN      
        1 mkiysaafia iiftqitsct aqksvssevq kthaeisike ggkwngrkye ggtwksvqsh
       61 tlnplhtdhs fdiryegpgw esnkiayrly ldwrnaidif gktsekivlp qvgldgfesy
      121 hlkqewgsdi lkvgkgqglg siarivdgkm yhfetvektt aaventskss svnihykgwk
      181 tlddkidlna klsifpderf teytftpsae iegiatgivk lknldviqkn sangkwgyia
      241 tygnqsmfdd glgmalfyet stvsevkdgp fdhlvvfkpt tkavtyyfla awekeqnaik
      301 tkaefqnyid tklaelnsks kl
//
LOCUS       WP_235141478             323 aa            linear   BCT 02-MAR-2025
DEFINITION  pectinesterase family protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141478
VERSION     WP_235141478.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013276.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01095.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..323
                     /product="pectinesterase family protein"
                     /GO_function="GO:0030599 - pectinesterase activity
                     [Evidence IEA]"
                     /GO_process="GO:0042545 - cell wall modification [Evidence
                     IEA]"
                     /calculated_mol_wt=36267
     Region          6..309
                     /region_name="PemB"
                     /note="Pectin methylesterase and related acyl-CoA
                     thioesterases [Carbohydrate transport and metabolism,
                     Lipid transport and metabolism]; COG4677"
                     /db_xref="CDD:443713"
ORIGIN      
        1 mmktflvafs llisvlnfaq dksfytvskd gsgdfvtiqd ainntkafpg eritifikng
       61 iykakvklhe wnstlslige skdstiityd dhfkkiglgr nstfftptll vegndailkn
      121 ltiensagdi gqaialtina nrvaiinckl lgnqdtlylt gegkqyfknc fiegttdfif
      181 gsataffenc eilskkdsyi taastpknte fgfvfqqcrf taakdiskvl lgrpwriyak
      241 tailnstlen hilpvawenw akkeaektsf yaefnnsgkg sdlknrvkws hqltkkeakm
      301 ytkenvlkds khpfwfknae nin
//
LOCUS       WP_235141323             300 aa            linear   BCT 02-MAR-2025
DEFINITION  LpxD N-terminal domain-containing protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141323
VERSION     WP_235141323.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 300)
  AUTHORS   Kelly,T.M., Stachula,S.A., Raetz,C.R. and Anderson,M.S.
  TITLE     The firA gene of Escherichia coli encodes
            UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase. The
            third step of endotoxin biosynthesis
  JOURNAL   J Biol Chem 268 (26), 19866-19874 (1993)
   PUBMED   8366125
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016494.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04613.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..300
                     /product="LpxD N-terminal domain-containing protein"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /GO_process="GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=32645
     Region          6..299
                     /region_name="LpxD"
                     /note="UDP-3-O-[3-hydroxymyristoyl] glucosamine
                     N-acyltransferase [Cell wall/membrane/envelope
                     biogenesis]; COG1044"
                     /db_xref="CDD:440666"
ORIGIN      
        1 mtfnqpqtlr siaeiigakm igdedfpvfg tneihrvkag eivfvnhpky yekalnsaat
       61 iilidkevdc ppgkallisd dpfrdfnkin thfkrifnft kelhdievgd gthihpsavi
      121 gnevqigknc lifpnvvigd gtiigdnvti qsgtvlggda fyyrkhngef drlisvgnvi
      181 iqnrveignn ctidrgvtds tiigegsvld nqiqighdtv igkrcmiasl tgiagccile
      241 devtvwgqvg masgvrvasg tvllgktgvn kdlkkgtyfg plaeefkdyl kkeiklknlq
//
LOCUS       WP_235141482             219 aa            linear   BCT 02-MAR-2025
DEFINITION  TrmH family RNA methyltransferase [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141482
VERSION     WP_235141482.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 219)
  AUTHORS   Persson,B.C., Jager,G. and Gustafsson,C.
  TITLE     The spoU gene of Escherichia coli, the fourth gene of the spoT
            operon, is essential for tRNA (Gm18) 2'-O-methyltransferase
            activity
  JOURNAL   Nucleic Acids Res 25 (20), 4093-4097 (1997)
   PUBMED   9321663
REFERENCE   2  (residues 1 to 219)
  AUTHORS   Koonin,E.V. and Rudd,K.E.
  TITLE     SpoU protein of Escherichia coli belongs to a new family of
            putative rRNA methylases
  JOURNAL   Nucleic Acids Res 21 (23), 5519 (1993)
   PUBMED   8265370
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012797.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00588.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..219
                     /product="TrmH family RNA methyltransferase"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006396 - RNA processing [Evidence IEA]"
                     /calculated_mol_wt=24891
     Region          17..178
                     /region_name="SpoU-like_TrmH"
                     /note="SAM-dependent tRNA methylase related to TrmH;
                     cd18092"
                     /db_xref="CDD:349965"
     Site            order(109,111,131..134,137,151..152,154,160..161,163,166)
                     /site_type="other"
                     /note="SAM binding site [chemical binding]"
                     /db_xref="CDD:349965"
     Region          <172..>199
                     /region_name="BACK"
                     /note="BACK (BTB and C-terminal Kelch) domain; cl28903"
                     /db_xref="CDD:475122"
ORIGIN      
        1 mkdlqtfeyl qqfltperlq kinhfapess dfvlpviedv yqfrnaaaiv rsveacgfhk
       61 ivamesknef npnlrvtkga etwveverlp hsieslsqik drgyqilavs peknatllpd
      121 yqitqpvalv fgtekegvtp eildfadetl aipmygftrs ynvsvaaaic vyelkqkllr
      181 sdinyklsed klwqlkvrwa ansiksgeqi lakylrdns
//
LOCUS       WP_235141508             464 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141508
VERSION     WP_235141508.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..464
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=51115
     Region          15..460
                     /region_name="PRK10504"
                     /note="putative transporter; Provisional"
                     /db_xref="CDD:182502"
ORIGIN      
        1 mpnsqssvkk flplilatsi fmqmldstil ntslpsiakd lqesplnmqn aiisyvltla
       61 lfmpvsgfla dkfgtrkifi fslvifmlgs lfcalsqdlt qlvisrviqg lggslmtpvg
      121 rlaliktfek nelmkamnya iipaligpil gplvggymvd yfswhwifli nipigllgll
      181 lslkympdyr sdqitfdlkg flifasasll lsvslemfgs sqhttlilli ftfgflmiyy
      241 yyihakktkn pifplnlfqv rtfrvgivgn latrlgissi plllplmiqi aygesavvsg
      301 wivapmalta mlgkssviki ldyfgyrrtl mtntfiigil isclgipgmn tsiywfipii
      361 ailgffnsiq ftsmntiaia dlrtshtssg nsllavnqql avgfgiafgl ialkifennt
      421 svtggsthla frytfyivgf ltvlsgfvfr rlhssdgenm kshv
//
LOCUS       WP_235140586             224 aa            linear   BCT 02-MAR-2025
DEFINITION  LysM-like peptidoglycan-binding domain-containing protein
            [Klebsiella quasipneumoniae].
ACCESSION   WP_235140586
VERSION     WP_235140586.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Jorgenson,M.A. and Young,K.D.
  TITLE     YtfB, an OapA Domain-Containing Protein, Is a New Cell Division
            Protein in Escherichia coli
  JOURNAL   J Bacteriol 200 (13), e00046-18 (2018)
   PUBMED   29686141
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 224)
  AUTHORS   Burke,C., Liu,M., Britton,W., Triccas,J.A., Thomas,T., Smith,A.L.,
            Allen,S., Salomon,R. and Harry,E.
  TITLE     Harnessing single cell sorting to identify cell division genes and
            regulators in bacteria
  JOURNAL   PLoS One 8 (4), e60964 (2013)
   PUBMED   23565292
REFERENCE   3  (residues 1 to 224)
  AUTHORS   Moxon,E.R., Gewurz,B.E., Richards,J.C., Inzana,T., Jennings,M.P.
            and Hood,D.W.
  TITLE     Phenotypic switching of Haemophilus influenzae
  JOURNAL   Mol Microbiol 19 (5), 1149-1150 (1996)
   PUBMED   8830271
REFERENCE   4  (residues 1 to 224)
  AUTHORS   Weiser,J.N., Chong,S.T., Greenberg,D. and Fong,W.
  TITLE     Identification and characterization of a cell envelope protein of
            Haemophilus influenzae contributing to phase variation in colony
            opacity and nasopharyngeal colonization
  JOURNAL   Mol Microbiol 17 (3), 555-564 (1995)
   PUBMED   8559074
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016140.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04225.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..224
                     /product="LysM-like peptidoglycan-binding
                     domain-containing protein"
                     /GO_function="GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /calculated_mol_wt=24062
     Region          24..>224
                     /region_name="OapA"
                     /note="Cell division protein YtfB/OapA (opacity-associated
                     protein A) [Cell cycle control, cell division, chromosome
                     partitioning]; COG3061"
                     /db_xref="CDD:442295"
     Region          139..224
                     /region_name="OapA"
                     /note="Opacity-associated protein A LysM-like domain;
                     pfam04225"
                     /db_xref="CDD:427799"
ORIGIN      
        1 mpgrfeltst lakiwhapdh frlldplppm hrrgiiagfl lviigillps ddsqnpatts
       61 reanlnlqsq sqpqaggnqa vplppitntp tvsdadqmap vapepiqdeq pdqaqtqqpa
      121 asqpyqsssq qsapgieqqw rtyriesgkt laqlfrdhgl patdvyamaq vegagkplst
      181 lqsgqtlqir qnangvvtgl tidtgngqqv lftrqsngsf vrar
//
LOCUS       WP_235141537             586 aa            linear   BCT 02-MAR-2025
DEFINITION  discoidin domain-containing protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141537
VERSION     WP_235141537.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 586)
  AUTHORS   Baumgartner,S., Hofmann,K., Chiquet-Ehrismann,R. and Bucher,P.
  TITLE     The discoidin domain family revisited: new members from prokaryotes
            and a homology-based fold prediction
  JOURNAL   Protein Sci 7 (7), 1626-1631 (1998)
   PUBMED   9684896
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012956.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00754.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..586
                     /product="discoidin domain-containing protein"
                     /calculated_mol_wt=67753
     Region          48..362
                     /region_name="GH43-like"
                     /note="Glycosyl hydrolase family 43 protein;
                     uncharacterized; cd08982"
                     /db_xref="CDD:350096"
     Region          357..477
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
ORIGIN      
        1 mktslsfsvf flflfaisys qqktycnpin idygytpfes fssqgkhrat adpvivnfqn
       61 klflfstnqe gywysddmld wkfvsrkflr ekkyihdlna pavwaikdtl yvygstwesd
      121 fpiwkstnpt kddwkiavdt lkvgawdpaf hydedknkly lywgssnewp llgteintkt
      181 mqsegyvkpi iklkpedhgw erfgeyndnv flqpfvegaw vtkhngkyym qygapatefs
      241 gyadgvyvsk nplegyeyqq hnpfsykpgg fargaghgst fqdnfgtwwh vstifisvkn
      301 nferrlgiwp agfdkddvmy sntsygdypt llpkfakdkd ftkglftgwm llnyekpvta
      361 sstlggyhpn favdedikty wsaksgnsge wfqtdlgems tihaiqinya dqdvefmgkt
      421 lgkmhqykiy ssndgknwkv lvdksrntkd vphdyielek paktrylkme nlkmptgkfa
      481 lsgfrvfgkg sgekpgkvqn fvplradpkk fgerrsiwmk wqqnekadgy viyfgktpdk
      541 lygsimvygk neyfftgadr tdayyfqiea fnnngisers eifkse
//
LOCUS       WP_235141550             483 aa            linear   BCT 02-MAR-2025
DEFINITION  YitT family protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141550
VERSION     WP_235141550.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014627.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02588.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..483
                     /product="YitT family protein"
                     /calculated_mol_wt=54746
     Region          8..196
                     /region_name="COG4339"
                     /note="Predicted metal-dependent phosphohydrolase, HD
                     superfamily [General function prediction only]"
                     /db_xref="CDD:443480"
     Region          196..482
                     /region_name="YitT"
                     /note="Uncharacterized membrane-anchored protein YitT,
                     contains DUF161 and DUF2179 domains [Function unknown];
                     COG1284"
                     /db_xref="CDD:440895"
ORIGIN      
        1 mqyirlysyv iskleqeipg hityhnfqht ltvlenavai aekenmtede killktaall
       61 hdvgfiknhl nhemlscefa kthlpdfdys akeivlicem imatklpqtp knkmseilcd
      121 adlyylggee yelyanqlfe efkntgilkt rdawqrrqid fmkehryftk svqeernrkk
      181 nenttileek ikqlpknlrt aenfqeifsa vcgiiiaafa lnsflvpnhf fdggitglsl
      241 lvhelyhlnl alviilfnlp liiisyftig snfakktfls vlflgiylwq lpsfhithdk
      301 livavfggtf lgigvgmvmr agaaldgiev lalytlkrts ftiteiilgi niiifsiaal
      361 qfgietslys vltyfcatrt idyvvegira ytgvtiisak seeikhqlvn slgrgitvyk
      421 gergflpgry dvssdcdiif tvitrlemrk lknliseidp eafvfantik easggiiktr
      481 akh
//
LOCUS       WP_235141551             121 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6799 domain-containing protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141551
VERSION     WP_235141551.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042904.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20606.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..121
                     /product="DUF6799 domain-containing protein"
                     /calculated_mol_wt=13119
     Region          50..107
                     /region_name="DUF6799"
                     /note="Domain of unknown function (DUF6799); pfam20606"
                     /db_xref="CDD:466755"
ORIGIN      
        1 mkklifavfa ffsiiacktq psqstppppp pkevneittd aniaagterg vlmkngvmmt
       61 mqngesvpmt sdmtlengdk vlmngeiihk dgsktkmqeg miinnsgtrm dqngkmmepn
      121 r
//
LOCUS       WP_235141552             524 aa            linear   BCT 02-MAR-2025
DEFINITION  RagB/SusD family nutrient uptake outer membrane protein [Kaistella
            sp. 97-N-M2].
ACCESSION   WP_235141552
VERSION     WP_235141552.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 524)
  AUTHORS   Goulas,T., Garcia-Ferrer,I., Hutcherson,J.A., Potempa,B.A.,
            Potempa,J., Scott,D.A. and Gomis-Ruth,F.X.
  TITLE     Structure of RagB, a major immunodominant outer-membrane surface
            receptor antigen of Porphyromonas gingivalis
  JOURNAL   Mol Oral Microbiol 31 (6), 472-485 (2016)
   PUBMED   26441291
REFERENCE   2  (residues 1 to 524)
  AUTHORS   Bolam,D.N. and Koropatkin,N.M.
  TITLE     Glycan recognition by the Bacteroidetes Sus-like systems
  JOURNAL   Curr Opin Struct Biol 22 (5), 563-569 (2012)
   PUBMED   22819666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07980.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..524
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /calculated_mol_wt=57580
     Region          5..524
                     /region_name="SusD"
                     /note="starch-binding outer membrane lipoprotein SusD;
                     NF033071"
                     /db_xref="CDD:467962"
ORIGIN      
        1 mirknfkilt vigflalgsi tscvsdleqe prigmtsasi fadyanypna lakvyggfan
       61 ggqesnggns dvngidgnfs qytrmlftmq eiptdeavia wndgnlhtih kmtwdssnef
      121 isglyyrift qiatsneflr nvtdeklaan nitgdnltea kymraearyl ralsyfyald
      181 lygnvpfvde tylpgsvtpp ariaradlfk fvetellais eelkaprtna yaradqaaaw
      241 sllarlylns kvytgternn dvitycnkvi gagyslkgky edlfladndq nnpevifpia
      301 fdgvhiqtsg gstymvhaav ggtmpaesmf giaggwgglr ttsafvglfn sndkrgnfyk
      361 dgqtleindl gnfndgyafv kyknltsagn fgsdnaknfc dadipifrla diylmyaeat
      421 lrggngnist algyvnslrt ragassvgsl nldfilderg relgwemtrr sdlvrygkft
      481 taaylwpwkg nvkdgaavge yrnlfpipak divanpnliq npgy
//
LOCUS       WP_235141458             276 aa            linear   BCT 02-MAR-2025
DEFINITION  aspartate dehydrogenase domain-containing protein [Kaistella sp.
            97-N-M2].
ACCESSION   WP_235141458
VERSION     WP_235141458.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 276)
  AUTHORS   Yang,Z., Savchenko,A., Yakunin,A., Zhang,R., Edwards,A.,
            Arrowsmith,C. and Tong,L.
  TITLE     Aspartate dehydrogenase, a novel enzyme identified from structural
            and functional studies of TM1643
  JOURNAL   J Biol Chem 278 (10), 8804-8808 (2003)
   PUBMED   12496312
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014063.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01958.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..276
                     /product="aspartate dehydrogenase domain-containing
                     protein"
                     /GO_function="GO:0033735 - aspartate dehydrogenase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=30050
     Region          14..276
                     /region_name="AspD"
                     /note="L-aspartate dehydrogenase, NAD(P)-dependent [Amino
                     acid transport and metabolism]; COG1712"
                     /db_xref="CDD:441318"
ORIGIN      
        1 mvkykyyvrr metktlaivg cgklanivld afikgllpdy rligtysrtf ekaeniakki
       61 qslnfgydct pchslnellh lqpdyiveta spsslkelav palkngssiv tlsigafade
      121 efyklvakta aenetrvhla sgaiggfdvl rtvslmekse vsfetkkgpn slknteiyee
      181 glqtearqvf egnaaeaial fptrvnvava aalastgpen ikvsinsvpn fvgdnhriel
      241 kseqinavie vysqtaqiag wsvvntlrni tspivf
//
LOCUS       WP_235141569             218 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141569
VERSION     WP_235141569.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 218)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 218)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..218
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=25388
     Region          45..217
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(52,76,105,197,200)
                     /site_type="active"
                     /db_xref="CDD:239946"
     Site            order(52,197,200)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:239946"
     Site            order(52,76,105)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:239946"
ORIGIN      
        1 mkkifslfll lvvsysalaq erpvfwddiq nfkksdadhp ppksatllig sssftkwtdv
       61 gtyfpnktfi nrgfggstlk dlnfysddll kpyspkqiii ycgendfaed qnvapkevfn
      121 rfkkfyaair kyypkipvdy isikfspsrk nlwpkmaatn qlienfmkrk pnadyiditk
      181 smetpdgkir kdlfledmlh mkpegyelwk kemepylk
//
LOCUS       WP_235141631             309 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-grasp fold amidoligase family protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141631
VERSION     WP_235141631.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 309)
  AUTHORS   Iyer,L.M., Abhiman,S., Maxwell Burroughs,A. and Aravind,L.
  TITLE     Amidoligases with ATP-grasp, glutamine synthetase-like and
            acetyltransferase-like domains: synthesis of novel metabolites and
            peptide modifications of proteins
  JOURNAL   Mol Biosyst 5 (12), 1636-1660 (2009)
   PUBMED   20023723
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025663.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14305.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..309
                     /product="ATP-grasp fold amidoligase family protein"
                     /calculated_mol_wt=36133
     Region          64..302
                     /region_name="CPSase_L_D2"
                     /note="Carbamoyl-phosphate synthase L chain, ATP binding
                     domain; cl17255"
                     /db_xref="CDD:473076"
ORIGIN      
        1 mslrnylvgl knrnaflyyl wsknqqqkgi enlknvsdle aikklfhsca gkfpeleqpk
       61 tfsdkmqwlk lnyhnelttv cadkyevrky ltekgysail aeiigvytkv daipfqtlpq
      121 kfvikathgs gwnlictdks kinwfwwkkt fdiwlnsnif wpgrewpykn mparilvekf
      181 ltdksgllmd yklfcfngkv hfvqankgrd tanhaqnfyd ldwqilpfgk dlkprpdidi
      241 eppaqlsemv riaedlahdf pfvrvdfyev eekivfgemt fypksglpdf tppeydqilg
      301 elltlptki
//
LOCUS       WP_235141737             389 aa            linear   BCT 02-MAR-2025
DEFINITION  M28 family peptidase [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141737
VERSION     WP_235141737.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016289.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04389.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..389
                     /product="M28 family peptidase"
                     /calculated_mol_wt=42517
     Region          58..300
                     /region_name="Iap"
                     /note="Zn-dependent amino- or carboxypeptidase, M28 family
                     [Posttranslational modification, protein turnover,
                     chaperones, Amino acid transport and metabolism]; COG2234"
                     /db_xref="CDD:441835"
     Region          318..382
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     cl46851"
                     /db_xref="CDD:481191"
ORIGIN      
        1 mkkallsiit lfsvfwsaqt ftqayqdran qitqtninty ltefasygvk ktgsvanana
       61 lawlknkyas fgytasqive dpwtgggyts knlvitktgt lyptkfvivc ghfdtiagpg
      121 vndngsgtsi ileiarilkd vptdysikfi nfsgeeqgly gsqhyvqnvv nattpkmdik
      181 vvfnidevgg vagmvndtvf cdrdqsspss nnsasqaitq qlancvglys plftefdpay
      241 asdyvpfqqn geiitgfyeh nisnyphtan dtyvnmdpvy vfnvgkaalg avqhfagast
      301 itlavdcppe rmleslkisp npaknfvqie mvnlnrkdfs ftisdlsgrt iiatknesri
      361 dvsklengvy lgtmsvedqk vtkkiiikk
//
LOCUS       WP_235141666             204 aa            linear   BCT 02-MAR-2025
DEFINITION  WbqC family protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141666
VERSION     WP_235141666.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 204)
  AUTHORS   Holm,L., Laiho,A., Toronen,P. and Salgado,M.
  TITLE     DALI shines a light on remote homologs: One hundred discoveries
  JOURNAL   Protein Sci 32 (1), e4519 (2023)
   PUBMED   36419248
REFERENCE   2  (residues 1 to 204)
  AUTHORS   Feng,L., Tao,J., Guo,H., Xu,J., Li,Y., Rezwan,F., Reeves,P. and
            Wang,L.
  TITLE     Structure of the Shigella dysenteriae 7 O antigen gene cluster and
            identification of its antigen specific genes
  JOURNAL   Microb Pathog 36 (2), 109-115 (2004)
   PUBMED   14687563
REFERENCE   3  (residues 1 to 204)
  AUTHORS   Fratamico,P.M., Briggs,C.E., Needle,D., Chen,C.Y. and DebRoy,C.
  TITLE     Sequence of the Escherichia coli O121 O-antigen gene cluster and
            detection of enterohemorrhagic E. coli O121 by PCR amplification of
            the wzx and wzy genes
  JOURNAL   J Clin Microbiol 41 (7), 3379-3383 (2003)
   PUBMED   12843098
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020463.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08889.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..204
                     /product="WbqC family protein"
                     /calculated_mol_wt=24247
     Region          10..197
                     /region_name="WbqC"
                     /note="WbqC-like protein family; pfam08889"
                     /db_xref="CDD:430289"
ORIGIN      
        1 mkkvllpvfy lppiswfsvf lredseivfe qfesfpkqty rnrttiygan grlsliipmn
       61 hngkrtmhei evshrdnwln ihwksikiay qgspyfefye dklreiftfq tnsllefnln
      121 alrilqkilk tekpytlnke yfkipseeny resfsakkes efdtaeyyqt fsdkygflpd
      181 lsivdlicnk gpealtylkn iqtk
//
LOCUS       WP_235141750             113 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141750
VERSION     WP_235141750.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..113
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=12974
     Region          11..108
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(12..14,28,45..47)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133389"
ORIGIN      
        1 mklnlpdkly ysigevakaf dvnasliryw eqefpiikpk knkkgnryft pediknlkii
       61 fhlvkekgyt ldgarialtt nskisetvsm idrlefvkae llklkdslvd kpe
//
LOCUS       WP_235141781             292 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141781
VERSION     WP_235141781.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024554.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13155.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..292
                     /product="toprim domain-containing protein"
                     /calculated_mol_wt=34244
     Region          189..274
                     /region_name="Toprim_2"
                     /note="Toprim-like; pfam13155"
                     /db_xref="CDD:463793"
ORIGIN      
        1 mnckqfnsis leevllslgh lptkqsekea wylnpfates qasfkiikri nywylfsegi
       61 ggtntdfmkk ylnasvnevl vwaedqnfss fqkqnipdqk fenpsknyei lnvneiqhpa
      121 lleylrerkv gnqtqflhei hyrmndknyf gigskndsgg yeirnkyski clgkkdisti
      181 kngseslrif egffdflsfk nvenflekep vdylilnsvs mihnikssig nyenielyfd
      241 ndeagnrave mirnenqnae dcrilysdfk dlndwmirkn plperqvklr rr
//
LOCUS       WP_235141844             363 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141844
VERSION     WP_235141844.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..363
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=41311
     Region          15..358
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mkteassrgg astydmivfc hlrwdfvyqr pqhilsrlsk eykilvveep vhfesmkkst
       61 feireinsqi hvcqphvsdm eeigpylkkh lkntvfsvgw fysaafvsvl dtlecetvvy
      121 dcmdeltlfk gasqklvdqe nlllsaadvv ytggkslyes kklkhhnvfc fpssvdiahf
      181 sgakdkvstm pedlkgistp ivgyygvide ridlrllkna aakspnysfv migpickiee
      241 sdlpraknih ylgmksyeel pnylqyfdva mmpfalndst kfisptktle ymaagkpiis
      301 trikdverdy sdcvmlvnss deftlalkfp mqnfeekyks ilektswnat vekmnsmikk
      361 via
//
LOCUS       WP_235141848             197 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6766 family protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141848
VERSION     WP_235141848.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042831.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20554.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..197
                     /product="DUF6766 family protein"
                     /calculated_mol_wt=22489
     Region          2..197
                     /region_name="DUF6766"
                     /note="Domain of unknown function (DUF6766); pfam20554"
                     /db_xref="CDD:466703"
ORIGIN      
        1 mlgqiifglq eynkdlqewg gsavgygayl ksghfleatf enleseflqm allvwltifl
       61 rqkgsseskk cdepnevdre psplregapw pvrkggfylk lyqnsltftl filfilsfll
      121 hvygslkdan tenlllgkpl ekwsdyivds rlwfesfqnw qseflsifai iilsiylrqk
      181 gssqskpvda sysetge
//
LOCUS       WP_235141581             128 aa            linear   BCT 02-MAR-2025
DEFINITION  SRPBCC domain-containing protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141581
VERSION     WP_235141581.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 128)
  AUTHORS   Santiago,B., Schubel,U., Egelseer,C. and Meyer,O.
  TITLE     Sequence analysis, characterization and CO-specific transcription
            of the cox gene cluster on the megaplasmid pHCG3 of Oligotropha
            carboxidovorans
  JOURNAL   Gene 236 (1), 115-124 (1999)
   PUBMED   10433972
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017999.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06240.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..128
                     /product="SRPBCC domain-containing protein"
                     /calculated_mol_wt=14389
ORIGIN      
        1 mnlegrkivv nksadelvnl lknpedyksl mpeslqsfev rdngfkfslk gmpeialkie
       61 evtesqvilk sasssldftl kgamnainet qtevqllfeg kfnpfikmmv ekplqnfmns
      121 ltdnieki
//
LOCUS       WP_235141870            1116 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome c biogenesis protein CcsA [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141870
VERSION     WP_235141870.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 1116)
  AUTHORS   Sawyer,E.B. and Barker,P.D.
  TITLE     Continued surprises in the cytochrome c biogenesis story
  JOURNAL   Protein Cell 3 (6), 405-409 (2012)
   PUBMED   22723177
REFERENCE   2  (residues 1 to 1116)
  AUTHORS   Stevens,J.M., Mavridou,D.A., Hamer,R., Kritsiligkou,P.,
            Goddard,A.D. and Ferguson,S.J.
  TITLE     Cytochrome c biogenesis System I
  JOURNAL   FEBS J 278 (22), 4170-4178 (2011)
   PUBMED   21958041
REFERENCE   3  (residues 1 to 1116)
  AUTHORS   Sanders,C., Turkarslan,S., Lee,D.W. and Daldal,F.
  TITLE     Cytochrome c biogenesis: the Ccm system
  JOURNAL   Trends Microbiol 18 (6), 266-274 (2010)
   PUBMED   20382024
REFERENCE   4  (residues 1 to 1116)
  AUTHORS   Page,M.D., Pearce,D.A., Norris,H.A.C. and Ferguson,S.J.
  TITLE     The Paracoccus denitrificans ccmA, B and C genes: cloning and
            sequencing, and analysis of the potential of their products to form
            a haem or apo- c-type cytochrome transporter
  JOURNAL   Microbiology (Reading) 143 (Pt 2), 563-576 (1997)
   PUBMED   9043133
REFERENCE   5  (residues 1 to 1116)
  AUTHORS   Delgado,M.J., Yeoman,K.H., Wu,G., Vargas,C., Davies,A.E.,
            Poole,R.K., Johnston,A.W. and Downie,J.A.
  TITLE     Characterization of the cycHJKL genes involved in cytochrome c
            biogenesis and symbiotic nitrogen fixation in Rhizobium
            leguminosarum
  JOURNAL   J Bacteriol 177 (17), 4927-4934 (1995)
   PUBMED   7665469
REFERENCE   6  (residues 1 to 1116)
  AUTHORS   Thony-Meyer,L., Fischer,F., Kunzler,P., Ritz,D. and Hennecke,H.
  TITLE     Escherichia coli genes required for cytochrome c maturation
  JOURNAL   J Bacteriol 177 (15), 4321-4326 (1995)
   PUBMED   7635817
REFERENCE   7  (residues 1 to 1116)
  AUTHORS   Bonnard,G. and Grienenberger,J.M.
  TITLE     A gene proposed to encode a transmembrane domain of an ABC
            transporter is expressed in wheat mitochondria
  JOURNAL   Mol Gen Genet 246 (1), 91-99 (1995)
   PUBMED   7529870
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013725.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01578.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     gene            1..1116
                     /gene="ccsA"
     Protein         1..1116
                     /product="cytochrome c biogenesis protein CcsA"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /GO_process="GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /calculated_mol_wt=125722
     Region          <66..>261
                     /region_name="ResB"
                     /note="Cytochrome c biogenesis protein ResB [Energy
                     production and conversion, Posttranslational modification,
                     protein turnover, chaperones]; COG1333"
                     /db_xref="CDD:440944"
     Region          <345..>427
                     /region_name="ResB"
                     /note="Cytochrome c biogenesis protein ResB [Energy
                     production and conversion, Posttranslational modification,
                     protein turnover, chaperones]; COG1333"
                     /db_xref="CDD:440944"
     Region          844..1084
                     /region_name="CcmC"
                     /note="ABC-type transport system involved in cytochrome c
                     biogenesis, permease component [Posttranslational
                     modification, protein turnover, chaperones]; COG0755"
                     /db_xref="CDD:440518"
ORIGIN      
        1 mkkiqhvlis trtmavlllv fafamayatf lendfgtpta kaliyeakwf eavmllliln
       61 fignisryrl wrrekwptlv fhlsfilifi ggavtryisy egimhirega tsnevvtdkn
      121 ffkiqieekg dilnyqdvpf tmipdearek kliakltakd fkagydyhgk qinvkqvqfi
      181 qrkkdslvvg nggteylhlv stgqtgreni yikagdsklv ngtlvsfnra idgavefnnt
      241 ngtlliktpv danfmtmatq atgttkkdey qplvlrslyt indlklvvpe glkkgkliay
      301 egdrkkdkdv sdqltvevqg pktkmlvdlp vekgnpnafk qisldgmnii lgfgpkvynt
      361 pfslkldkfv metypgstsp sayeshvkii degketpyki ymnhvlnhgg yrffqasfdp
      421 drkgtvlsvn hdfwgtiisy lgyaflflgm fvtffwkgsh fwklnknlks vnhkraatvi
      481 llllsmsfna qyidthgtdg sdqkhsaadg hghedadavl mqeeapkekp npmslkspkm
      541 isadeiinrn kiseehadkf gsllvqnreg rivpintqal dvlrklyksd kfkgtngksl
      601 tvnqwflain tdtaswtmvp likivnggee llkktkanae gyttlmnmfp adengqlhyv
      661 leddfriafa kkpaaqskyd lavidlndrv qafneffsgq flrivpvqnd pnstwhswld
      721 qnfepdansq kvmgpyfssv ldaqqtgnws kadaelknls ayqqkwgknv ipseskvkle
      781 vfmnkvnlnf kllifytiig alllllgfve lfkpnkilnr vikgiialgv igyiahflgl
      841 isrwylsgha pwsngyeaii fiswvgisag lmfyfgfgkp sfkkkdksvk inrnnvsnal
      901 ipaagfmvav immgfahggs aldpqitplv pvlksywliv hvavivssyg ffglsmviav
      961 itlvfyiish kksyhfhhdt tlkeltivse msltiglfal tvgnflggiw aneswgryws
     1021 wdpketwafi simvyafvlh mrlvpglrsr wfyhtatmfa ycsmvmtyfg vnyylsglhs
     1081 yaagdpvpvp awvyiglgsm illatvsfvr fralkk
//
LOCUS       WP_235141872             116 aa            linear   BCT 02-MAR-2025
DEFINITION  type II toxin-antitoxin system RelE/ParE family toxin [Kaistella
            sp. 97-N-M2].
ACCESSION   WP_235141872
VERSION     WP_235141872.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05973.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..116
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /calculated_mol_wt=13974
     Region          2..112
                     /region_name="Gp49"
                     /note="Phage derived protein Gp49-like (DUF891); cl46407"
                     /db_xref="CDD:480747"
ORIGIN      
        1 mkrfnvifls earefllrvd eksrhkiifn idksqvkndt elfkklqgni wefrtlynkt
       61 yfrifafwdk tekintfvla thgiikktgk tpeneiikae nirlryfelk nklnen
//
LOCUS       WP_235141906             397 aa            linear   BCT 02-MAR-2025
DEFINITION  methylmalonyl-CoA mutase family protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141906
VERSION     WP_235141906.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 397)
  AUTHORS   Mancia,F., Keep,N.H., Nakagawa,A., Leadlay,P.F., McSweeney,S.,
            Rasmussen,B., Bosecke,P., Diat,O. and Evans,P.R.
  TITLE     How coenzyme B12 radicals are generated: the crystal structure of
            methylmalonyl-coenzyme A mutase at 2 A resolution
  JOURNAL   Structure 4 (3), 339-350 (1996)
   PUBMED   8805541
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013781.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01642.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..397
                     /product="methylmalonyl-CoA mutase family protein"
                     /GO_function="GO:0016866 - intramolecular transferase
                     activity [Evidence IEA]"
                     /GO_function="GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /calculated_mol_wt=45041
     Region          2..370
                     /region_name="MM_CoA_mutase"
                     /note="Coenzyme B12-dependent-methylmalonyl coenzyme A
                     (CoA) mutase (MCM)-like family; contains proteins similar
                     to MCM, and the large subunit of Streptomyces coenzyme
                     B12-dependent isobutyryl-CoA mutase (ICM). MCM catalyzes
                     the isomerization of...; cl00817"
                     /db_xref="CDD:469938"
ORIGIN      
        1 mfknitlrdw enivqkqlkt ddiyavlske nlegiqvkpy yasvakplnn lpkieesthl
       61 vsnyhessee nvfafllnnn venltekvif vnnkdlaehi svvetnryfs lidifsedes
      121 geireqlgke llaknfekni cidialhqna gatitqqlav glakakdite ifgaeiltki
      181 ifkvalggny ffeiakiral kllynqfske fgldeipyif aetslrnkst adaennlirs
      241 tlelsagmig gadavytnny kienssslse eisfkqqivl ayesiinvfd dagngsyyie
      301 dltqqfaeka wkvflkmeee ggycellksg kiqktiyeqa lkeqiwveeg kikiigvnly
      361 ptlekrrlpr kcttavrlsp cgwrkcsnkf itnahiy
//
LOCUS       WP_235141927             137 aa            linear   BCT 02-MAR-2025
DEFINITION  SRPBCC domain-containing protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141927
VERSION     WP_235141927.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 137)
  AUTHORS   Stark,J.L., Mercier,K.A., Mueller,G.A., Acton,T.B., Xiao,R.,
            Montelione,G.T. and Powers,R.
  TITLE     Solution structure and function of YndB, an AHSA1 protein from
            Bacillus subtilis
  JOURNAL   Proteins 78 (16), 3328-3340 (2010)
   PUBMED   20818668
REFERENCE   2  (residues 1 to 137)
  AUTHORS   Lotz,G.P., Lin,H., Harst,A. and Obermann,W.M.
  TITLE     Aha1 binds to the middle domain of Hsp90, contributes to client
            protein activation, and stimulates the ATPase activity of the
            molecular chaperone
  JOURNAL   J Biol Chem 278 (19), 17228-17235 (2003)
   PUBMED   12604615
REFERENCE   3  (residues 1 to 137)
  AUTHORS   Panaretou,B., Siligardi,G., Meyer,P., Maloney,A., Sullivan,J.K.,
            Singh,S., Millson,S.H., Clarke,P.A., Naaby-Hansen,S., Stein,R.,
            Cramer,R., Mollapour,M., Workman,P., Piper,P.W., Pearl,L.H. and
            Prodromou,C.
  TITLE     Activation of the ATPase activity of hsp90 by the stress-regulated
            cochaperone aha1
  JOURNAL   Mol Cell 10 (6), 1307-1318 (2002)
   PUBMED   12504007
REFERENCE   4  (residues 1 to 137)
  AUTHORS   Sevier,C.S. and Machamer,C.E.
  TITLE     p38: A novel protein that associates with the vesicular stomatitis
            virus glycoprotein
  JOURNAL   Biochem Biophys Res Commun 287 (2), 574-582 (2001)
   PUBMED   11554768
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08327.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..137
                     /product="SRPBCC domain-containing protein"
                     /calculated_mol_wt=16345
     Region          4..136
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(4,6,8,17..19,21..22,33,50,52,54,56,69,71,73,80,82,
                     89..90,92,94,104,106,108,110,115..119,121..122,125..127,
                     130)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176906"
ORIGIN      
        1 mepitiniti lkpinqvwdy fyipkhivkw nfttpkwhcp kavidfregg kfdyrleckd
       61 ksfgynfsgn iteikdqehv ksqlddgrli evhfraidpn ttevtqifep eeqysrqmqr
      121 dawyailnnf hkyvenn
//
LOCUS       WP_235141974             463 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141974
VERSION     WP_235141974.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..463
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=54552
     Region          91..227
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          156..192
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          197..224
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <361..457
                     /region_name="AraC"
                     /note="AraC-type DNA-binding domain and AraC-containing
                     proteins [Transcription]; COG2207"
                     /db_xref="CDD:441809"
ORIGIN      
        1 mseefyekal ddilvankls qnsgndyifn ktiyyiaqnk iylgqyedan keliiclkff
       61 kenlnstksl gknyemyyiy slmslidsnt klgkftanks llkeafnylk dnqlpqyipy
      121 fissegtnay yskdydtaia klseairlyn dqwdhntevf ylglsywntg kkklaikyle
      181 eidkhydktk kldpqfrsay eilikyynst gntakqleyi nklmfldrsy eknykylyqr
      241 ivkeydtkkl vaeknrient letqriifia vflilvggfl ffglqiyrek qnykkrfdei
      301 faqqsdakhl devkptpdsa dyedqqktdy efynkiagln plfvenilkq leifenenky
      361 ldtqisqksl seelgtnsty fskiintykg knfalyisdl rlnyiidhlk sdvkylnmdv
      421 kelaaiagfs saenfsanfs rkfdlkpsvf ikmmkdklkp ehs
//
LOCUS       WP_235141989             104 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4286 family protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141989
VERSION     WP_235141989.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025479.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14114.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..104
                     /product="DUF4286 family protein"
                     /calculated_mol_wt=12252
     Region          1..97
                     /region_name="DUF4286"
                     /note="Domain of unknown function (DUF4286); pfam14114"
                     /db_xref="CDD:464087"
ORIGIN      
        1 msvlsltfht tetirtdwer ylakdlfemv enlidvqkyi lsevesdmid egsntnllli
       61 fddtekrqdf veiellnitd riekkfgqha mifttylnpk kvrf
//
LOCUS       WP_235142031            1154 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235142031
VERSION     WP_235142031.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..1154
                     /product="helicase-related protein"
                     /calculated_mol_wt=134452
     Region          16..189
                     /region_name="PLDc_SF"
                     /note="Catalytic domain of phospholipase D superfamily
                     proteins; cl15239"
                     /db_xref="CDD:472788"
     Site            order(125,127,147,149,164)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197200"
     Site            125
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197200"
     Region          <267..918
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
ORIGIN      
        1 mqlsiskqyp qnfnmlidnh stdkkvhhwi ekytsegdfs ivtgyftiga lvyfskfsrq
       61 kikdykfilg ditqrdsnlv ksldllnadl siekalslkk lameavdflk ldnvsvktle
      121 pnfchaklyl fkgddedpqk dfyvtgssnl teagiglkds hnielnvans gfdrqfkdle
      181 iwfkdlwsnk kafdekiiin vggkeskipf kqylieeisk lfqdyvpkdi yykilfelfs
      241 qdilididnp efakkigrle nteiyqslye fqkkgaisli kkldkydgai ladavglgkt
      301 wsalavmkyy qnagreivlf cpkklennwr kykkdqdsrf erdeleyyir yhtdlvetlm
      361 gkdeylkerr ntnfdnkkpk lfvideshnl rndksnrfiy lleemikkne dikvlllsat
      421 pinnsfkdvr nqvkliskdv ndafdesldv knlhglfsta srhfndwqkk dkspvkelvs
      481 kmddsffrlt dallvartrk mivgqqndlf fpqkhrpdnr yvtpkvmedv dnledllklf
      541 ppmlcgyqpi rytmtakeke irtkkinkgn revdiledev qrdmflvkmm yilllkrles
      601 swfsfestvs kilnhhqnal nkvelfkink deklaegfkl ndfdeedfed ltlgkreisi
      661 teifksgnle mferdlkrdi kamnkmaegm kvfsesiede lgtenkknsa dtklenlisv
      721 ietkrdsknn ggnpkvlift sytdtanyly khlnhrgfkn vamvsgagak ingedeiikr
      781 fepvlerfap ftklfmerkw dhfqpesksl dkqfkewkkw vsgiddqvad qlknpidili
      841 atdtlsegqn lqdcdmviny dihwnpvrti qrvgridrlg spnkeiftvn fwpaenlney
      901 lnlqsriekr mmamklmgse dikdftdhya dmsideelet rhtdrmleqm qnsvddldge
      961 ksfgfddlsl etfrqdlase lnerrehyen lpnaifsgvk hqsldilkdg rglisllgsp
     1021 pknpkdklpy kslrlihide dgaelllndk eilqylnavk deerygckkl digdkaevrk
     1081 ysdalakwfe nqtteteina dgtqsktagk esisfleklk kgkkeamsam rsnekiseky
     1141 khenwdliaw ltvn
//
LOCUS       WP_235142042             194 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1989 domain-containing protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235142042
VERSION     WP_235142042.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020905.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09347.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..194
                     /product="DUF1989 domain-containing protein"
                     /calculated_mol_wt=21564
     Region          6..193
                     /region_name="YcgI"
                     /note="Uncharacterized conserved protein YcgI, DUF1989
                     family [Function unknown]; COG3665"
                     /db_xref="CDD:442882"
ORIGIN      
        1 msnintidkq sgaafyvkkd qiltvidpeg mqvsdmvlfk sedfgekiss gktldfeesi
       61 litkgnflws nrsrkmmeil edtngrndfl lapcsketfe lmydykgyhp sclenlsknl
      121 apmgieqddi ptafnvfmnv qfdangklsv lpptskagdh vkfqaqmdll vcltacsaed
      181 snggsfkpiq ykid
//
LOCUS       WP_235142123             217 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-binding protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235142123
VERSION     WP_235142123.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13460.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..217
                     /product="NAD(P)H-binding protein"
                     /calculated_mol_wt=24143
     Region          1..195
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(7,9..10,12,33..35,69..71,109..111,122,126,146..149)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187560"
     Site            order(87,111,122,126)
                     /site_type="active"
                     /db_xref="CDD:187560"
ORIGIN      
        1 mkalvigatg atgkdlvkql lndpdyeevn vfvrkplete npklknhlvd fdkpaewrdl
       61 vqgdvafscl gttlknagsk eeqrkvdydy qynfaktake ngvedyilvs sygaspkski
      121 fyskmkgdle esvknlhfnk itifqpgmle rkdtertgev lggkiikfan kfgilthqkp
      181 lptdvlaqam inaskiksng yskiklgnif sfaekgk
//
LOCUS       WP_235142133             882 aa            linear   BCT 02-MAR-2025
DEFINITION  MGH1-like glycoside hydrolase domain-containing protein [Kaistella
            sp. 97-N-M2].
ACCESSION   WP_235142133
VERSION     WP_235142133.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 882)
  AUTHORS   Ndeh,D., Rogowski,A., Cartmell,A., Luis,A.S., Basle,A., Gray,J.,
            Venditto,I., Briggs,J., Zhang,X., Labourel,A., Terrapon,N.,
            Buffetto,F., Nepogodiev,S., Xiao,Y., Field,R.A., Zhu,Y.,
            O'Neil,M.A., Urbanowicz,B.R., York,W.S., Davies,G.J., Abbott,D.W.,
            Ralet,M.C., Martens,E.C., Henrissat,B. and Gilbert,H.J.
  TITLE     Complex pectin metabolism by gut bacteria reveals novel catalytic
            functions
  JOURNAL   Nature 544 (7648), 65-70 (2017)
   PUBMED   28329766
  REMARK    Erratum:[Nature. 2017 Aug 31;548(7669):612. doi:
            10.1038/nature23659.. PMID: 29411780]
REFERENCE   2  (residues 1 to 882)
  AUTHORS   Bianchetti,C.M., Elsen,N.L., Fox,B.G. and Phillips,G.N. Jr.
  TITLE     Structure of cellobiose phosphorylase from Clostridium thermocellum
            in complex with phosphate
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 67 (Pt 11),
            1345-1349 (2011)
   PUBMED   22102229
REFERENCE   3  (residues 1 to 882)
  AUTHORS   Kurakata,Y., Uechi,A., Yoshida,H., Kamitori,S., Sakano,Y.,
            Nishikawa,A. and Tonozuka,T.
  TITLE     Structural insights into the substrate specificity and function of
            Escherichia coli K12 YgjK, a glucosidase belonging to the glycoside
            hydrolase family 63
  JOURNAL   J Mol Biol 381 (1), 116-128 (2008)
   PUBMED   18586271
  REMARK    Erratum:[J Mol Biol. 2008 Nov 14;383(3):745]
REFERENCE   4  (residues 1 to 882)
  AUTHORS   Cui,Z., Maruyama,Y., Mikami,B., Hashimoto,W. and Murata,K.
  TITLE     Crystal structure of glycoside hydrolase family 78
            alpha-L-Rhamnosidase from Bacillus sp. GL1
  JOURNAL   J Mol Biol 374 (2), 384-398 (2007)
   PUBMED   17936784
REFERENCE   5  (residues 1 to 882)
  AUTHORS   Gibson,R.P., Gloster,T.M., Roberts,S., Warren,R.A., Storch de
            Gracia,I., Garcia,A., Chiara,J.L. and Davies,G.J.
  TITLE     Molecular basis for trehalase inhibition revealed by the structure
            of trehalase in complex with potent inhibitors
  JOURNAL   Angew Chem Int Ed Engl 46 (22), 4115-4119 (2007)
   PUBMED   17455176
REFERENCE   6  (residues 1 to 882)
  AUTHORS   Hidaka,M., Honda,Y., Kitaoka,M., Nirasawa,S., Hayashi,K.,
            Wakagi,T., Shoun,H. and Fushinobu,S.
  TITLE     Chitobiose phosphorylase from Vibrio proteolyticus, a member of
            glycosyl transferase family 36, has a clan GH-L-like
            (alpha/alpha)(6) barrel fold
  JOURNAL   Structure 12 (6), 937-947 (2004)
   PUBMED   15274915
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046269.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22422.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..882
                     /product="MGH1-like glycoside hydrolase domain-containing
                     protein"
                     /calculated_mol_wt=103436
     Region          412..857
                     /region_name="GDB1"
                     /note="Glycogen debranching enzyme (alpha-1,6-glucosidase)
                     [Carbohydrate transport and metabolism]; COG3408"
                     /db_xref="CDD:442634"
ORIGIN      
        1 mteeskripn vawkkwgpyv snrewglvre dysangdawn ftnhdtaeak tyrwgeegic
       61 gvcddkqllv fslglwnkkd kmvkerffgl tngqgnhged vkeyyyyldn tpthsymkml
      121 ykypqnafpy ddllrknaar grleaeyeli dtgifddney fdvfieyakn sptdilvkit
      181 vinrgkndap lilmptvwfr ntwnwgyddy kpkmtsdrad hikierkeld iknfyaknsl
      241 ktlfcnnetn dvrlyhslne tpftkdginr fvttgkdngi nkenfgtkat flldetipae
      301 stqifefrls eenlddpfkd fdeiflsrqk eadefyayiq kgipsddekn vqrqafagml
      361 wnkmfyhynv akwlkgdpae ikppksreki rncewkhlnn fdiismpdkw eypwyatwdl
      421 afhtlsfali dpdfakqqik lftldwymhp ngqlpayewn fsdvnppvha walfrifkid
      481 etlkgkpdld fletvfqkll lnftwwvnkk dsngnnifeg gflgldnvgv fdrsdtlpng
      541 qrleqadgts wmamfalnmm risielaqyn hiyeematkf fehflyiana ldnmgdnnfs
      601 lwddedeffy daiatnkgdn mflklrtvvg lipmfavevi edemleklpv fkarmhwime
      661 nkpelaslvs ywevkgqdsk hllsllrghr lkrllvrmld ekeflsdygv ralskiyedn
      721 pfeihlndid ysikytpaes dsglfggnsn wrgpiwfpin fliieslqrf ffyyspdfmv
      781 eyptgsgnys nldeiadalg krlskiflkd engkravngq yprfqedenf kdyilfyeyf
      841 hgdngrgvga shqtgwtgli skilqprlsk fkmakdetet pn
//
LOCUS       WP_235142241             206 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235142241
VERSION     WP_235142241.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 206)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07883.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..206
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=22441
     Region          37..157
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 mkrnqfigal lplsavpvlg fsrvilpafr pkkvfkissg egrihgsikl kgvnsnildv
       61 kvsgkdtegd laifeqtsls pgkgtpyhvh pdqdeifhvt dgsyrfkvgd dlfdltvgds
      121 iflpravpha wtqisakgkm tvtvqpagkl enffvtmaal dheptpseia kifsdnemqv
      181 vgpslknllt ilpgkfrsvp hfisyd
//
LOCUS       WP_235142232             237 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase-fold protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235142232
VERSION     WP_235142232.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 237)
  AUTHORS   Goins,C.M., Dajnowicz,S., Smith,M.D., Parks,J.M. and Ronning,D.R.
  TITLE     Mycolyltransferase from Mycobacterium tuberculosis in covalent
            complex with tetrahydrolipstatin provides insights into antigen 85
            catalysis
  JOURNAL   J Biol Chem 293 (10), 3651-3662 (2018)
   PUBMED   29352107
REFERENCE   2  (residues 1 to 237)
  AUTHORS   van Straaten,K.E., Gonzalez,C.F., Valladares,R.B., Xu,X.,
            Savchenko,A.V. and Sanders,D.A.
  TITLE     The structure of a putative S-formylglutathione hydrolase from
            Agrobacterium tumefaciens
  JOURNAL   Protein Sci 18 (10), 2196-2202 (2009)
   PUBMED   19653299
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012958.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00756.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..237
                     /product="alpha/beta hydrolase-fold protein"
                     /calculated_mol_wt=27866
     Region          1..236
                     /region_name="COG4947"
                     /note="Esterase/lipase superfamily enzyme [General
                     function prediction only]"
                     /db_xref="CDD:443974"
ORIGIN      
        1 mpriehtdfy shllgmslkv evtghyghpi lmfptsqgqy tqnhdfklne sinwfvdqgk
       61 vklynietid kfsfydknis paerirnyem yvqfliqefv pylqslhseh riavagasfg
      121 gyhaanfafr fpdvvshmfc lsgafsirnf mdgyssdlvy fncprefvrn deawkyshmh
      181 ivlstsdedi cleqtkemag ilaskgidhw yderkwinhd wplwrmvfpm fmgkffs
//
LOCUS       WP_235142415             157 aa            linear   BCT 02-MAR-2025
DEFINITION  sterol desaturase family protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235142415
VERSION     WP_235142415.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Zhu,G., Koszelak-Rosenblum,M., Connelly,S.M., Dumont,M.E. and
            Malkowski,M.G.
  TITLE     The Crystal Structure of an Integral Membrane Fatty Acid
            alpha-Hydroxylase
  JOURNAL   J Biol Chem 290 (50), 29820-29833 (2015)
   PUBMED   26515067
REFERENCE   2  (residues 1 to 157)
  AUTHORS   Lagarde,D. and Vermaas,W.
  TITLE     The zeaxanthin biosynthesis enzyme beta-carotene hydroxylase is
            involved in myxoxanthophyll synthesis in Synechocystis sp. PCC 6803
  JOURNAL   FEBS Lett 454 (3), 247-251 (1999)
   PUBMED   10431816
REFERENCE   3  (residues 1 to 157)
  AUTHORS   Husselstein,T., Schaller,H., Gachotte,D. and Benveniste,P.
  TITLE     Delta7-sterol-C5-desaturase: molecular characterization and
            functional expression of wild-type and mutant alleles
  JOURNAL   Plant Mol Biol 39 (5), 891-906 (1999)
   PUBMED   10344195
REFERENCE   4  (residues 1 to 157)
  AUTHORS   Mitchell,A.G. and Martin,C.E.
  TITLE     Fah1p, a Saccharomyces cerevisiae cytochrome b5 fusion protein, and
            its Arabidopsis thaliana homolog that lacks the cytochrome b5
            domain both function in the alpha-hydroxylation of
            sphingolipid-associated very long chain fatty acids
  JOURNAL   J Biol Chem 272 (45), 28281-28288 (1997)
   PUBMED   9353282
REFERENCE   5  (residues 1 to 157)
  AUTHORS   Bard,M., Bruner,D.A., Pierson,C.A., Lees,N.D., Biermann,B.,
            Frye,L., Koegel,C. and Barbuch,R.
  TITLE     Cloning and characterization of ERG25, the Saccharomyces cerevisiae
            gene encoding C-4 sterol methyl oxidase
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 186-190 (1996)
   PUBMED   8552601
REFERENCE   6  (residues 1 to 157)
  AUTHORS   Aarts,M.G., Keijzer,C.J., Stiekema,W.J. and Pereira,A.
  TITLE     Molecular characterization of the CER1 gene of arabidopsis involved
            in epicuticular wax biosynthesis and pollen fertility
  JOURNAL   Plant Cell 7 (12), 2115-2127 (1995)
   PUBMED   8718622
REFERENCE   7  (residues 1 to 157)
  AUTHORS   Arthington,B.A., Bennett,L.G., Skatrud,P.L., Guynn,C.J.,
            Barbuch,R.J., Ulbright,C.E. and Bard,M.
  TITLE     Cloning, disruption and sequence of the gene encoding yeast C-5
            sterol desaturase
  JOURNAL   Gene 102 (1), 39-44 (1991)
   PUBMED   1864507
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016041.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04116.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..157
                     /product="sterol desaturase family protein"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_process="GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=18511
     Region          <1..143
                     /region_name="FA_hydroxylase"
                     /note="Fatty acid hydroxylase; cl01132"
                     /db_xref="CDD:412761"
ORIGIN      
        1 meilgyilit igifvamegv twlthrfvmh gmgwyfhedh hqpgyphvfe kndaffvvfa
       61 ipsillfyfg tvgginwmff vglgilfygi ayftvhdvli hrrfkwfdkt nnwylrglrk
      121 ahkmhhkhlg kedgecfgml yvplkyfrea rtsiskk
//
LOCUS       WP_235142448             259 aa            linear   BCT 02-MAR-2025
DEFINITION  HipA family kinase [Kaistella sp. 97-N-M2].
ACCESSION   WP_235142448
VERSION     WP_235142448.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042851.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20613.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..259
                     /product="HipA family kinase"
                     /calculated_mol_wt=29401
     Region          17..232
                     /region_name="HipA_2"
                     /note="HipA-like kinase; pfam20613"
                     /db_xref="CDD:466762"
ORIGIN      
        1 mndlclrtvt vmryilplre ggslpalaea dddfkyvlkf rgaghgvkml isellggiia
       61 qklglpvpel vfanldvdfg rmeadeeiqd llkfseglnl glhflsgaia ydssvkvddl
      121 laskivwlda fitnidrtfk ntnllmwhke lwvidngasf yfhhswqnfe aaaktpfkyv
      181 kdhvllpqat klaeadefak eklddkffrs lvnlipedwl qwndaeespa eireiyfqfl
      241 ktrlanseif lneaqnarg
//
LOCUS       WP_235141553             369 aa            linear   BCT 02-MAR-2025
DEFINITION  SusE domain-containing protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235141553
VERSION     WP_235141553.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 369)
  AUTHORS   Reeves,A.R., Wang,G.R. and Salyers,A.A.
  TITLE     Characterization of four outer membrane proteins that play a role
            in utilization of starch by Bacteroides thetaiotaomicron
  JOURNAL   J Bacteriol 179 (3), 643-649 (1997)
   PUBMED   9006015
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025650.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14292.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..369
                     /product="SusE domain-containing protein"
                     /calculated_mol_wt=39811
     Region          23..130
                     /region_name="SusE"
                     /note="SusE outer membrane protein; pfam14292"
                     /db_xref="CDD:433843"
     Region          163..265
                     /region_name="CBM_SusE-F_like"
                     /note="carbohydrate-binding modules from Bacteroides
                     thetaiotaomicron SusE, SusF and similar proteins; cl28889"
                     /db_xref="CDD:475118"
     Site            order(174,211,213,221,224)
                     /site_type="other"
                     /note="starch binding site [chemical binding]"
                     /db_xref="CDD:240562"
     Region          290..366
                     /region_name="CBM_SusE-F_like"
                     /note="carbohydrate-binding modules from Bacteroides
                     thetaiotaomicron SusE, SusF and similar proteins; cl28889"
                     /db_xref="CDD:475118"
     Site            order(314,316,323,326)
                     /site_type="other"
                     /note="starch binding site [chemical binding]"
                     /db_xref="CDD:240562"
ORIGIN      
        1 mktnilnkii fafiaiigli acsdrelvta nntgapmvmd lstdhlfldq nfpnnaalti
       61 twtaaeysip vavnysvems adeafstpae igivtesmrn itfttkqmne aakkiglvpn
      121 vvqnmyfrvt ayvgaddlpa vsnvtrlsit pylasptyey edlfiignat pggwdnladn
      181 dfllpllkts vasqytytgf fkaksgvdaa gfkmikvkgs wdaqfgkgaa egqlstdggs
      241 gnlsvpadgy ykltvdtaal tytlepvsvs pttytsisii gtvngnfdnd tqmtqstfdp
      301 hvwvlmgetl sggefkfran nswdtnwggn seyfgtatqg gdniplaaew dydiyfndat
      361 gaytiipvk
//
LOCUS       WP_235142484             948 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase [Kaistella sp. 97-N-M2].
ACCESSION   WP_235142484
VERSION     WP_235142484.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..948
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=105891
     Region          88..284
                     /region_name="eMpr"
                     /note="V8-like Glu-specific endopeptidase
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG3591"
                     /db_xref="CDD:442810"
     Region          <576..>791
                     /region_name="AprE"
                     /note="Serine protease, subtilisin family
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1404"
                     /db_xref="CDD:441014"
ORIGIN      
        1 msstkiindl ayerfqeats kiehvkkgiq etrmgeaslt diqtdsdkls kriarenmpi
       61 saaleringv pnfqdinily kilkisesva ritiktrygn sgygtgflva pgilitnnhv
      121 fpdaetakns mvqfyyelde nneankiqty gfapeklflt styeaqkdnp nsgldftiva
      181 itekskegky igdiphtvld etfgkiiege ncviiqhpkg dykktvmkdi rmltlkddfl
      241 iyesdtlpgs sgavviglgt gevvalhhss ipnknpqgqw lrkdggvykd gdadetidwl
      301 gnegirvssl ircirnmtlp pemsllrnti lgkhteikne pkttkprkek pqddmknsne
      361 svlnqavnmi qnapsrdnls lqyfeielsn islmqddwke nykklvpeiv tseplfplst
      421 ipsqkiiqyv tlssnenpwe iaaklealpq iktatpdlem etdlqkktrn nnqltesdml
      481 esmktsnaag reddfktkws aspfftldds dvvnqrlwnr tavglnlknk kgtnvtslld
      541 elfkakksaa gdaeqdenpd enaiienlkk inlvqldtgy tdhakvkgrf nfdcdedfid
      601 gsdarddmrt gllrhpghgt rtasiitggd mssvfkndgn ygilcdedkn slvniipyri
      661 sesvvlinrg knvvdavnqa vhtnadvmfm cmgsyprpmi aeaakvaydn gviwvcaagn
      721 evemvvapal cpgtiavsai npnqkpwrgs sygrevdisa pgedvyvpsm dekfneimvy
      781 gsgtsyatph vaaaaalwka trreeifeky kfpwqiveaf rkcvkssatk pavwdtenyg
      841 agilniydll kcelpdiekk dyayandtrq ewdlgvreav hflwntllrk tisaqessqe
      901 mqltersria iaamtgnpvs tvfesdsita ltdtekilkm yfdsyqkd
//
LOCUS       WP_235142564             680 aa            linear   BCT 02-MAR-2025
DEFINITION  endonuclease [Kaistella sp. 97-N-M2].
ACCESSION   WP_235142564
VERSION     WP_235142564.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 680)
  AUTHORS   Jekel,M. and Wackernagel,W.
  TITLE     The periplasmic endonuclease I of Escherichia coli has amino-acid
            sequence homology to the extracellular DNases of Vibrio cholerae
            and Aeromonas hydrophila
  JOURNAL   Gene 154 (1), 55-59 (1995)
   PUBMED   7867949
REFERENCE   2  (residues 1 to 680)
  AUTHORS   Nakamura,A., Koide,Y., Miyazaki,H., Kitamura,A., Masaki,H.,
            Beppu,T. and Uozumi,T.
  TITLE     Gene cloning and characterization of a novel extracellular
            ribonuclease of Bacillus subtilis
  JOURNAL   Eur J Biochem 209 (1), 121-127 (1992)
   PUBMED   1396690
REFERENCE   3  (residues 1 to 680)
  AUTHORS   Focareta,T. and Manning,P.A.
  TITLE     Extracellular proteins of Vibrio cholerae: molecular cloning,
            nucleotide sequence and characterization of the deoxyribonuclease
            (DNase) together with its periplasmic localization in Escherichia
            coli K-12
  JOURNAL   Gene 53 (1), 31-40 (1987)
   PUBMED   3036665
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016146.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04231.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..680
                     /product="endonuclease"
                     /GO_function="GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /calculated_mol_wt=72364
     Region          32..262
                     /region_name="Endonuclease_1"
                     /note="Endonuclease I; pfam04231"
                     /db_xref="CDD:398077"
     Region          <272..628
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          610..679
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     cl46851"
                     /db_xref="CDD:481191"
ORIGIN      
        1 mkkittllla fvfsfglaqa panyyngtdg ltgaalktkl gqiitagaqd hgygglydgy
       61 pttdrdhfye ndgsildiys enptgtdpyn yqhgikkcgn ysnegdcynr ehvvpqslfn
      121 skapmvsdin firptdgkvn gmrsnypfga vaspsftskn gtkvgpsssa gyggtvcepi
      181 defkgdiarm ifyfvtryep llstfstgnm lggskypglq twerdvlmaw atqdpvspte
      241 iernnasyvf qgnrnpfidh pewvqqvwgt qvvdnqapst ptnlavlsts tasanlswta
      301 stdnigvsyy kiyvngtfhs nsptttatvs glaqgttfnf yviavdaagn mspqsntasg
      361 ttltdnenpg aptnlavlsv gtnniavqwt aatdnvgvas ydiyvngall gstndtttni
      421 anldpstsyt iyivakdaag nvspqsnsvt attlaigvnc gdenfdsipa sasiystynw
      481 tsngiswtse dsrtdqtlng kaitirngfl talsvpngig dltvttklif ngtagtlkif
      541 ingtdtgktv pysstatttt vtglntegvv eislvnsstt nrviiddmkw tcyalaavne
      601 sgitknalti ypnpvkngql nvkgtnlsev amaqifdftg klvqtvaqpf knstqivlkn
      661 lpkgiyilka gsstakfivd
//
LOCUS       WP_235142593             366 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease [Kaistella sp. 97-N-M2].
ACCESSION   WP_235142593
VERSION     WP_235142593.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 366)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024110.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12698.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..366
                     /product="ABC transporter permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=40987
     Region          <4..358
                     /region_name="ABC2_perm_RbbA"
                     /note="ribosome-associated ATPase/putative transporter
                     RbbA; NF033858"
                     /db_xref="CDD:468210"
ORIGIN      
        1 mkqlltfvkk efwhvlrdrr illilfgmpv vqillfgfal stevkdtrig vldqdksqns
       61 meliskigan qyfdiyenla svseaedafk sgkikmivvi paqfaqnlns dckakiqlit
      121 dgadlnlanq iysfmsniil dfygeqnfnq rsgvqpeirm lynpqlkgap nfvpgvmafi
      181 lliicvlmta iaivrekesg tmevllvspm kpyiiilaka ipyfilsvli lisililsvt
      241 vldlpirgnl lllfgisiif iitnlligiv isiltntqqt amlislvgtm lptlmlsgfm
      301 fpvenmpvpl qvvgniipak wyyeivknim ikgtglevlw khvlvlfgmm iilfviavkk
      361 fkirle
//
LOCUS       WP_235142566             697 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF349 domain-containing protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235142566
VERSION     WP_235142566.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 697)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015926.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03993.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..697
                     /product="DUF349 domain-containing protein"
                     /calculated_mol_wt=80997
     Region          <18..>138
                     /region_name="PHA03169"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:223003"
     Region          210..278
                     /region_name="DUF349"
                     /note="Domain of Unknown Function (DUF349); pfam03993"
                     /db_xref="CDD:427636"
     Region          286..351
                     /region_name="DUF349"
                     /note="Domain of Unknown Function (DUF349); pfam03993"
                     /db_xref="CDD:427636"
     Region          363..440
                     /region_name="DUF349"
                     /note="Domain of Unknown Function (DUF349); pfam03993"
                     /db_xref="CDD:427636"
     Region          448..517
                     /region_name="DUF349"
                     /note="Domain of Unknown Function (DUF349); pfam03993"
                     /db_xref="CDD:427636"
     Region          523..591
                     /region_name="DUF349"
                     /note="Domain of Unknown Function (DUF349); pfam03993"
                     /db_xref="CDD:427636"
ORIGIN      
        1 mitedsisdq pekkprteev spennsdest qtstehstdv fpsdpapakv adensdelta
       61 enktsentts apeenssepe ipseddqaev lqekpehqvd vdtqksvgip peekvlseid
      121 pekadhgepe aaqtedsemd essnlslpev lnemeklinq enagshfrtf nqlkeranhl
      181 isdetedqks efvaagnsee tfsfhhpmqa klsglihvfr ekndeytkkq eenhsknlee
      241 rqgiienlkn lytnteagtn lfkairvike ewknagqvak sefkilnnny fhhlnqfyqm
      301 ldmnkeymeq eyahnlekrq hiierakelq tepavqkaln elqylhklwk eeaepvaeef
      361 rektwdefke isnkihdrks elsaqideeq tenlakknki ieeikkitsp ekepnhnywq
      421 nsikkiedlr seflklgsvp rkvsnqnwnd fkqhlrnfnt sknqfykglk nsqqanldek
      481 lkliatakdn mlsedwetvv plfkklqedw kkighvprtm tnkvwddfre acntffnnyr
      541 ekndavndnw kenfkhkkql ldelkeitae dgsvekieqi ktswnnigkv prekininte
      601 fnktlreklk lnkiseyslk eeglsenqvt dkarkiknqi gdleaeivkm ennlgffsns
      661 srenpllket yekiddkksq lesmkqslhg ilsgenq
//
LOCUS       WP_235142633             578 aa            linear   BCT 02-MAR-2025
DEFINITION  OstA-like protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235142633
VERSION     WP_235142633.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 578)
  AUTHORS   Aono,R., Negishi,T. and Nakajima,H.
  TITLE     Cloning of organic solvent tolerance gene ostA that determines
            n-hexane tolerance level in Escherichia coli
  JOURNAL   Appl Environ Microbiol 60 (12), 4624-4626 (1994)
   PUBMED   7811102
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024500.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13100.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..578
                     /product="OstA-like protein"
                     /calculated_mol_wt=65519
     Region          44..196
                     /region_name="LptD_N"
                     /note="LptA/(LptD N-terminal domain) LPS transport
                     protein; cl21541"
                     /db_xref="CDD:451300"
     Region          171..276
                     /region_name="LptA"
                     /note="Lipopolysaccharide export system protein LptA [Cell
                     wall/membrane/envelope biogenesis]; COG1934"
                     /db_xref="CDD:441537"
     Region          234..>326
                     /region_name="LptD"
                     /note="LPS assembly outer membrane protein LptD (organic
                     solvent tolerance protein OstA) [Cell
                     wall/membrane/envelope biogenesis]; COG1452"
                     /db_xref="CDD:441061"
     Region          357..>461
                     /region_name="LptA"
                     /note="Lipopolysaccharide export system protein LptA [Cell
                     wall/membrane/envelope biogenesis]; COG1934"
                     /db_xref="CDD:441537"
ORIGIN      
        1 mkgffvvflf wsitifaqip tqpkdpavkd pffnqtaana qgekvqlihs dtfgivkgky
       61 ddnpffsgnv qffhqgstlt adevifyreq nfvraignvk lqnadgsvit sgemeydgnt
      121 qkgiakknvv ltdpgqtikt etlyynrlsn nayfntggti skdgnimytk sanydlnsri
      181 idftgsvkid npeytvegvn iiqnqntnta tfngattitn kknpsnliyt ekgtynmnsk
      241 evylkknsri nyngkiltgd dmyfnqitgf gtakgnvtlr dpqeqrymkg gygeifekkd
      301 sammtdrpya vkilekdsmy fsaerilayq kpdaenpvkk ksflraykks rmfktniqvr
      361 adslsfnetd gimhldgnpi awsgekqvtg dkieayfdte nefidslrvi enafaiskad
      421 slnmkdefnq ikgklmivyy nqnqvnlakv ignaqaitya ddqnektkev erigvslstc
      481 gtieaefedk kvqiiscnig antdiypmsl isrekrffpd fnwntkdrlr kwedifldsp
      541 ayeevkyesd dalynaaqks iddakakdea rkpkrvrk
//
LOCUS       WP_235142648             302 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6427 family protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235142648
VERSION     WP_235142648.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040411.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19992.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..302
                     /product="DUF6427 family protein"
                     /calculated_mol_wt=34530
     Region          1..300
                     /region_name="DUF6427"
                     /note="Family of unknown function (DUF6427); pfam19992"
                     /db_xref="CDD:437824"
ORIGIN      
        1 mfrllskesn ifsipvyigi lllivigfnf ldfntldvvs aiftfagial gyfcfnaial
       61 nyqthlplfl ytviifslyl gdldigiavs iftnsiilll lsnidmvvrk nsyilvgail
      121 alnfiflptt wpmslfvilh iigtsdkval hifrlfygil lvalsyfgia yflgmnswnp
      181 ayfpftplkp skdllnlvwl lpvalmlvha lmdhfknfnk ksptskfkyt ftlifslaql
      241 itivlymgnh yeyllllalp asiilsrmlr flpkywmkei glwliifsll lfklanyfkf
      301 ni
//
LOCUS       WP_235142703             148 aa            linear   BCT 02-MAR-2025
DEFINITION  KTSC domain-containing protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235142703
VERSION     WP_235142703.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025005.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13619.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..148
                     /product="KTSC domain-containing protein"
                     /calculated_mol_wt=17271
     Region          7..>73
                     /region_name="DnaJ"
                     /note="DnaJ-class molecular chaperone with C-terminal Zn
                     finger domain [Posttranslational modification, protein
                     turnover, chaperones]; COG0484"
                     /db_xref="CDD:440252"
     Region          <92..137
                     /region_name="KTSC"
                     /note="KTSC domain; pfam13619"
                     /db_xref="CDD:433353"
ORIGIN      
        1 mkrigehrkl lgvdktatlk dlktiyrntm kdahpdkfvd deagkleaee ksksvieayh
       61 flvsinpetq ekykeeytet isnsiiqdfy leksilkvqh fngkmfeyig vprniylkmv
      121 nsdspsrfar rhiygkfiyr kngevmae
//
LOCUS       WP_235142710             400 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Kaistella sp. 97-N-M2].
ACCESSION   WP_235142710
VERSION     WP_235142710.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 400)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 400)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..400
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=43983
     Region          16..378
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(84..85,88,152,181,184,202,205)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:99738"
     Site            205
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99738"
ORIGIN      
        1 mekfdaanni qdlqyfgefg gvnpsisdss tytflsaktm fdtfegnteg cylysrhssp
       61 snlylgeala qmegtesanv tasgmgaits allqlcksgd hlissrtiyg gtyafmknfl
      121 pgfqiktsfv ditdlnsven alteqtkvlf cetvsnplle iadlrelakl akkhnikliv
      181 dntfsplsvs pqtlgtditi hsltkfings sdavagvvca ssefindlkd vnsgacmllg
      241 ptldsfraas ilknlrtlhi rikkhsenaq ylaekfeedg livkypglks hkqhnlfksm
      301 mnveygfggl mtldvktvek anelmelmqr enlgylavsl gfyktlfsas gsstsseipe
      361 eeqkemglsp glirmsigld hdikrtyekm kwcmqqvnil
//
LOCUS       WP_235142790             243 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA-formamidopyrimidine glycosylase family protein [Kaistella sp.
            97-N-M2].
ACCESSION   WP_235142790
VERSION     WP_235142790.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 243)
  AUTHORS   Gilboa,R., Zharkov,D.O., Golan,G., Fernandes,A.S., Gerchman,S.E.,
            Matz,E., Kycia,J.H., Grollman,A.P. and Shoham,G.
  TITLE     Structure of formamidopyrimidine-DNA glycosylase covalently
            complexed to DNA
  JOURNAL   J Biol Chem 277 (22), 19811-19816 (2002)
   PUBMED   11912217
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013328.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01149.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..243
                     /product="DNA-formamidopyrimidine glycosylase family
                     protein"
                     /GO_function="GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /calculated_mol_wt=27631
     Region          1..98
                     /region_name="FpgNei_N"
                     /note="N-terminal domain of Fpg (formamidopyrimidine-DNA
                     glycosylase, MutM)_Nei (endonuclease VIII) base-excision
                     repair DNA glycosylases; cl03119"
                     /db_xref="CDD:470740"
     Region          2..240
                     /region_name="Nei"
                     /note="Formamidopyrimidine-DNA glycosylase [Replication,
                     recombination and repair]; COG0266"
                     /db_xref="CDD:440036"
     Site            order(2..3,49,63,65..67,76..77)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176808"
     Site            2
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:176808"
     Site            order(3..6,8..9,12,46..50)
                     /site_type="other"
                     /note="H2TH interface [polypeptide binding]"
                     /db_xref="CDD:176808"
     Site            order(3,49)
                     /site_type="active"
                     /note="putative catalytic residues [active]"
                     /db_xref="CDD:176808"
ORIGIN      
        1 mpegpsilfl knklqrykgk tvseasgyge mdkskivnik lvdietygkn llfvfkdffv
       61 gvhlglfgsm lvnkrkkvna sfslhfadge infyvaktkl yegkpsdhfn fktdilkpef
      121 dpefilkele nhgdemigdv lmdqhifagv gniirietly hakihpqsiv keipekklvf
      181 llkmvvdyae eflallktgg vkeaamvygk ktcpkhktel viaemgkikr ktyvcekcqk
      241 lyq
//
LOCUS       WP_235142877             128 aa            linear   BCT 02-MAR-2025
DEFINITION  barstar family protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235142877
VERSION     WP_235142877.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 128)
  AUTHORS   Buckle,A.M., Schreiber,G. and Fersht,A.R.
  TITLE     Protein-protein recognition: crystal structural analysis of a
            barnase-barstar complex at 2.0-A resolution
  JOURNAL   Biochemistry 33 (30), 8878-8889 (1994)
   PUBMED   8043575
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013500.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01337.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..128
                     /product="barstar family protein"
                     /calculated_mol_wt=14911
     Region          4..91
                     /region_name="Barstar_like"
                     /note="Barstar is an intracellular inhibitor of barnase,
                     an extracellular ribonuclease of Bacillus
                     amyloliquefaciens. Barstar binds tightly to the barnase
                     active site and sterically blocks it, thus inhibiting its
                     potentially lethal RNase activity inside the...; cl01048"
                     /db_xref="CDD:470045"
     Site            order(32,34,36..38,42,82)
                     /site_type="other"
                     /note="RNAase interaction site [polypeptide binding]"
                     /db_xref="CDD:240166"
ORIGIN      
        1 mkeftiegkk irdiktfyve inrvfmpded wklgesldal ndllyggfge iegkeniiiw
       61 knfeenrkil gfettlqfye aklkspqifn tnfiqekidd lkkgngqtyf eiileiigah
      121 snikliek
//
LOCUS       WP_235142903             106 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6660 family protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235142903
VERSION     WP_235142903.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042493.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20365.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..106
                     /product="DUF6660 family protein"
                     /calculated_mol_wt=11370
     Region          1..104
                     /region_name="DUF6660"
                     /note="Family of unknown function (DUF6660); pfam20365"
                     /db_xref="CDD:466514"
ORIGIN      
        1 mkfislflsl ffailvtvpc ndevsqfsgs sttavekksg dsqhsdfdac svfctcsccg
       61 ivkvldqkla eisevkiaap stkisdfqlf tlskiplgiw qppkls
//
LOCUS       WP_235142914            1136 aa            linear   BCT 02-MAR-2025
DEFINITION  methylmalonyl-CoA mutase family protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235142914
VERSION     WP_235142914.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 1136)
  AUTHORS   Mancia,F., Keep,N.H., Nakagawa,A., Leadlay,P.F., McSweeney,S.,
            Rasmussen,B., Bosecke,P., Diat,O. and Evans,P.R.
  TITLE     How coenzyme B12 radicals are generated: the crystal structure of
            methylmalonyl-coenzyme A mutase at 2 A resolution
  JOURNAL   Structure 4 (3), 339-350 (1996)
   PUBMED   8805541
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013781.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01642.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1136
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..1136
                     /product="methylmalonyl-CoA mutase family protein"
                     /GO_function="GO:0016866 - intramolecular transferase
                     activity [Evidence IEA]"
                     /GO_function="GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /calculated_mol_wt=127022
     Region          2..141
                     /region_name="Sbm"
                     /note="Methylmalonyl-CoA mutase, C-terminal domain/subunit
                     (cobalamin-binding) [Lipid transport and metabolism];
                     COG2185"
                     /db_xref="CDD:441788"
     Region          165..482
                     /region_name="ArgK"
                     /note="GTPase of the G3E family (not a periplasmic protein
                     kinase) [Posttranslational modification, protein turnover,
                     chaperones]; COG1703"
                     /db_xref="CDD:441309"
     Region          512..1059
                     /region_name="MM_CoA_mutase"
                     /note="Coenzyme B12-dependent-methylmalonyl coenzyme A
                     (CoA) mutase (MCM)-like family; contains proteins similar
                     to MCM, and the large subunit of Streptomyces coenzyme
                     B12-dependent isobutyryl-CoA mutase (ICM). MCM catalyzes
                     the isomerization of...; cl00817"
                     /db_xref="CDD:469938"
ORIGIN      
        1 mnqekytpkn kvrvvtaasl fdghdaaini mrrmiqatga evihlghdks aeevvdcaiq
       61 edanaialts yqgghneyfk yiydllrqkg apqikifggg ggvilpeeir elmdygidri
      121 yspddgremg lqgmindlvq ksdfatgeki evrdldkikf ensksiaevi savenfseek
      181 pdlvaeihkr asaplssgeg pgvrkipiig itgtggagks sltdelvrrf lrsnpdqkia
      241 ivsvdpskkk tggallgdri rmnsindprv ymrsmatren nvsvskfihs tldvlklakp
      301 niiiletsgi gqsgseitdi advsmyvmtp eygastqlek idmldyadli alnksdkrga
      361 ldalqavrkt yqrnhtafdq pleampvfst kasqfndygt telynalink vnsklkqtqg
      421 enapkfkefv eqnvsdditv ipakrvryls eivesnhayd keveqqalva kkmyllegak
      481 vlitddqntv dklekvflkt kkelseenia flkgwhhfke emagdsfsyf vrgkeikvet
      541 kyeslshlki pklslpkfqd wgdllrwkgq envpgqfpyt aglfpfkrtg edptrmfage
      601 ggpertnrrf hyvsadmdak rlstafdsvt lygqdpafpp difgkignag vsiatlddak
      661 klysgfdlvn amtsvsmtin gpapmllaff mnaaidqnve kylsennlwe aveaqlkakf
      721 ddkglkrpay egelpkgnng lglkllgitg devidreiyn kikadtiatv rgtvqadilk
      781 edqaqntcif stefalrlmg dvqqyfidqk vrnfysvsis gyhiaeagan pisqlaftla
      841 ngftyveyyl srgmnindfa pnlsfffsng ldpeyavigr varriwakam klkyhaners
      901 qmlkyhiqts grslhaqeid fndirttlqa lyaiydncns lhtnaydeai ttptedsvrr
      961 amaiqliink elglaknenp lqgsfiieel tdlveeavyt efdritergg vlgametmyq
     1021 rskiqeesmh yemlkhtgef piigvntflg kdgsptvrpg evirsteeek qlqiqnlenf
     1081 qkshadksgq ilkdlqtaai nqenlfekmm eavkycslgq itnalfevgg myrrnm
//
LOCUS       WP_235142918             214 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6759 domain-containing protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235142918
VERSION     WP_235142918.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042797.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20545.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..214
                     /product="DUF6759 domain-containing protein"
                     /calculated_mol_wt=23874
     Region          107..198
                     /region_name="DUF6759"
                     /note="Domain of unknown function (DUF6759); pfam20545"
                     /db_xref="CDD:466694"
ORIGIN      
        1 mkkaaliltv fsalhlsaqk kksdilkstn ikeienflrv ahpddprrsv lkpklislrn
       61 stwmkagkts faslkpvvte iprsvvqqkh naeaeefrkl ldensgnhqk ktvkllnqlf
      121 nndvsnkeai lllqnnsdcn mivriqgeyy ynlavpahge nsvvikkgdy qlssnvcdar
      181 ysstkniakn mlvilnnpvv qlqsyaqgrn gasn
//
LOCUS       WP_235142922             978 aa            linear   BCT 02-MAR-2025
DEFINITION  reprolysin-like metallopeptidase [Kaistella sp. 97-N-M2].
ACCESSION   WP_235142922
VERSION     WP_235142922.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024972.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13583.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..978
                     /product="reprolysin-like metallopeptidase"
                     /GO_function="GO:0008237 - metallopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=103409
     Region          199..402
                     /region_name="ZnMc"
                     /note="Zinc-dependent metalloprotease. This super-family
                     of metalloproteases contains two major branches, the
                     astacin-like proteases and the adamalysin/reprolysin-like
                     proteases. Both branches have wide phylogenetic
                     distribution, and contain sub-families, which...; cl00064"
                     /db_xref="CDD:469599"
     Region          454..938
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          656..739
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(728..729,731..732)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          910..978
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mkkiftslll glmstaaiaq wsptsmkgek iratfnvtsy ysldlnalrs tlanaqetgn
       61 gavpveiklp tldgkierfa vysapvvvks ladryqlgsy igvgiddpaa yvrfsiapnd
      121 fqsmtfrkga yefiepqntd ksvygvhpkt nkseedkafv cstseapltk kqidqmymsg
      181 ksfannpsdf skasdkkyrt mrlvmttnge ytqyhgglag amaainatvt rcngvfekdf
      241 glhlilqdfp aliyldpatd pysttlsswn laaqkaitav ageanydigh mfgasggggn
      301 agcigcvcis pplngsgvpt gngkgsgits padgipmgdn fdidfvahem ghqlggnhtf
      361 smslegtgqn vepgsgstim gyagitgatd vqqhsdayfh insiiqvqnn ltaktcdiet
      421 pvtndppvit pmaditipks tafvltaqat dpqgdpityn weevddatvt isktnlgntt
      481 sgasfrslns ttspvryfpk fatvlagsvk nvneweaast varasnfrvt vrdnnanvaq
      541 qqtqqalqkv tvsangpfki tstkvynnat apltwdvvgt dvapfnspnv kidytadnga
      601 twvvlaastp ndgtedfnfs afatntvlkv risaignvfy tiapvtvsai vpcdgsapag
      661 ltvstvttes aavswdpivg atyvvrykkt tdatwtsvpv avnsytitgl eegtpydvqv
      721 asvctgttgt fsatvnftts miayctlsst nsgdeyisnv sisaegasgg tstsgasnyt
      781 nysadparlm klakgttnnt isvtkawtgt qyseavtvwi dfdrsgtyea semvmsstps
      841 tvnpatqtfa vpataysgdk tvgmrvalrf ntaqttpcgt ytygevedya vsisptlgvn
      901 dsaasqsvqv ypnpavdvln vtkvsnnady aiynaagqlv skgkvsnnqv qvsklvkgvy
      961 vitvdnngev nkvkfikk
//
LOCUS       WP_235142924             159 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6452 family protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235142924
VERSION     WP_235142924.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040109.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20050.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..159
                     /product="DUF6452 family protein"
                     /calculated_mol_wt=17418
ORIGIN      
        1 mkflkiflip lflcflfscg sdddicigge atprmkikfk tkatgklktl dslyinvdyg
       61 sgpvsvvatk sktdsvlipl rvddaaftkm fvgtskaait seikinyttn ssyvspacgi
      121 kkiyenvsal levpnpvldv eknqnqivde skthfyllf
//
LOCUS       WP_235142999             873 aa            linear   BCT 02-MAR-2025
DEFINITION  MGH1-like glycoside hydrolase domain-containing protein [Kaistella
            sp. 97-N-M2].
ACCESSION   WP_235142999
VERSION     WP_235142999.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 873)
  AUTHORS   Ndeh,D., Rogowski,A., Cartmell,A., Luis,A.S., Basle,A., Gray,J.,
            Venditto,I., Briggs,J., Zhang,X., Labourel,A., Terrapon,N.,
            Buffetto,F., Nepogodiev,S., Xiao,Y., Field,R.A., Zhu,Y.,
            O'Neil,M.A., Urbanowicz,B.R., York,W.S., Davies,G.J., Abbott,D.W.,
            Ralet,M.C., Martens,E.C., Henrissat,B. and Gilbert,H.J.
  TITLE     Complex pectin metabolism by gut bacteria reveals novel catalytic
            functions
  JOURNAL   Nature 544 (7648), 65-70 (2017)
   PUBMED   28329766
  REMARK    Erratum:[Nature. 2017 Aug 31;548(7669):612. doi:
            10.1038/nature23659.. PMID: 29411780]
REFERENCE   2  (residues 1 to 873)
  AUTHORS   Bianchetti,C.M., Elsen,N.L., Fox,B.G. and Phillips,G.N. Jr.
  TITLE     Structure of cellobiose phosphorylase from Clostridium thermocellum
            in complex with phosphate
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 67 (Pt 11),
            1345-1349 (2011)
   PUBMED   22102229
REFERENCE   3  (residues 1 to 873)
  AUTHORS   Kurakata,Y., Uechi,A., Yoshida,H., Kamitori,S., Sakano,Y.,
            Nishikawa,A. and Tonozuka,T.
  TITLE     Structural insights into the substrate specificity and function of
            Escherichia coli K12 YgjK, a glucosidase belonging to the glycoside
            hydrolase family 63
  JOURNAL   J Mol Biol 381 (1), 116-128 (2008)
   PUBMED   18586271
  REMARK    Erratum:[J Mol Biol. 2008 Nov 14;383(3):745]
REFERENCE   4  (residues 1 to 873)
  AUTHORS   Cui,Z., Maruyama,Y., Mikami,B., Hashimoto,W. and Murata,K.
  TITLE     Crystal structure of glycoside hydrolase family 78
            alpha-L-Rhamnosidase from Bacillus sp. GL1
  JOURNAL   J Mol Biol 374 (2), 384-398 (2007)
   PUBMED   17936784
REFERENCE   5  (residues 1 to 873)
  AUTHORS   Gibson,R.P., Gloster,T.M., Roberts,S., Warren,R.A., Storch de
            Gracia,I., Garcia,A., Chiara,J.L. and Davies,G.J.
  TITLE     Molecular basis for trehalase inhibition revealed by the structure
            of trehalase in complex with potent inhibitors
  JOURNAL   Angew Chem Int Ed Engl 46 (22), 4115-4119 (2007)
   PUBMED   17455176
REFERENCE   6  (residues 1 to 873)
  AUTHORS   Hidaka,M., Honda,Y., Kitaoka,M., Nirasawa,S., Hayashi,K.,
            Wakagi,T., Shoun,H. and Fushinobu,S.
  TITLE     Chitobiose phosphorylase from Vibrio proteolyticus, a member of
            glycosyl transferase family 36, has a clan GH-L-like
            (alpha/alpha)(6) barrel fold
  JOURNAL   Structure 12 (6), 937-947 (2004)
   PUBMED   15274915
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046269.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22422.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..873
                     /product="MGH1-like glycoside hydrolase domain-containing
                     protein"
                     /calculated_mol_wt=101932
     Region          412..858
                     /region_name="GDB1"
                     /note="Glycogen debranching enzyme (alpha-1,6-glucosidase)
                     [Carbohydrate transport and metabolism]; COG3408"
                     /db_xref="CDD:442634"
ORIGIN      
        1 mterqrmqdd qwktwgpyvs nrqwgtvred yshngnawgh ttyneaisrt yrwsedgiag
       61 icdtkqrlcf alsfwnrkdk mikerffgls nhegnhgedl keiyyyldnt pthsymkmvy
      121 kypigefpyd rliaenarrn kqeeeyelvd tgifeennyf difieyakin hddilvrvtv
      181 snrsaekapl vllptlwfrn nwswgygdyi pqlkssasge ieihheslpi iklysrqent
      241 eaifcnnesn pavvkganpd akyfkdgvnn fvvhgnensv npekvgtkas fmleaeigag
      301 etktfdfrls phdmenaffd fdeiiqlrke eaedfyadiq egltdpeekn iqrqafagll
      361 wnkqfyhynv skwlngdpkl didrdptlfa rnaewehmqn kdvismpdkw eypwfatwdl
      421 afhcvpfail dagfakhqlk lltkewyihp ngqlpayewd fsdvnppvha wstfrvfkid
      481 erlngkadvp flesvfqkll lnftwwvnrk dkngnnvfgg gflgldniga fdrnmefkng
      541 dhleqadgts wmamfalnmm rismelalyn piyedmaikf fehylyiaea menlgdakng
      601 lwneddgffy dvlqlndgds kslklrsivg liplfaveiv ehsllqklpn flermewilr
      661 nkprlaelvs hwevegqggk hlmsilrktr lkrvlcrmvd ekeflsdygi rslskvyene
      721 pyefnvdgkn ftvkytpaes dssmfggnsn wrgpiwfpin fliveslqrf hyyygdnlqv
      781 eypsnsgemr nldfvatdls krlysifked engnrafngg ndllnhneff knyimfheyf
      841 ngdtgkgiga shqtgwtati akliqprmgs rpr
//
LOCUS       WP_235143036             740 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4838 domain-containing protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235143036
VERSION     WP_235143036.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027452.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16126.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..740
                     /product="DUF4838 domain-containing protein"
                     /calculated_mol_wt=84818
     Region          <48..127
                     /region_name="Glyco_hydro_20b"
                     /note="Glycosyl hydrolase family 20, domain 2; cl03741"
                     /db_xref="CDD:446174"
     Region          190..446
                     /region_name="DUF4838"
                     /note="Domain of unknown function (DUF4838); pfam16126"
                     /db_xref="CDD:406516"
     Region          <635..711
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
ORIGIN      
        1 mryiflflmi famfspsktd aqvvqlaksg vsayeillae nvssteikaa evlqnyfyev
       61 trvklpiark peeaklyial kknstledeg saegftiknd gkqivikggt etgmlygvyy
      121 fvrtllhckk wapnekaecp kildlkiqfp lniveipafa yrevystaen dqeymdwygl
      181 hrlddlwglw ghsfsklvpt yffsthpeyf alvdgqrrtd qlclsnkevl kitlenlsqh
      241 fkdnpaakyw svspndnnnf cecelcrktd eeeggpqgsl irfvnkiaah ypektfttla
      301 ygatleppqh tkpranviif lsnidlyrnq pvatepsaar frnilkgwln qtsrifiwdy
      361 ytqftnylap fpdarnigvn idyykklgvt gvfaqmggns yvdqnelkty llsrklwnat
      421 lndeqlleef lqgyygnaap likdymlrlk kslgesrrrl diygnpvney nsylspnkme
      481 dfsnqfdaae klaensvirq riqklrlafd ftylqqarfy glekhgafte nrsgklsvrk
      541 dlplrvkrfv kkaeaagvka lseggiapae ylqewkkvfe ngliknkalg akvqfhkpfv
      601 pefpakeeat ltdgmygfkd fsynwllfen gfsatldlsa ekqvekvtid fledqrhwif
      661 lpasviihvs tdgnafqevk qpvffslkek dtaethkarf svgskvrfik isaeplqtlp
      721 awkpsrskkp liaiaeiwve
//
LOCUS       WP_235143073             254 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxypeptidase-like regulatory domain-containing protein
            [Kaistella sp. 97-N-M2].
ACCESSION   WP_235143073
VERSION     WP_235143073.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 254)
  AUTHORS   Cho,K.H. and Salyers,A.A.
  TITLE     Biochemical analysis of interactions between outer membrane
            proteins that contribute to starch utilization by Bacteroides
            thetaiotaomicron
  JOURNAL   J Bacteriol 183 (24), 7224-7230 (2001)
   PUBMED   11717282
REFERENCE   2  (residues 1 to 254)
  AUTHORS   Shipman,J.A., Berleman,J.E. and Salyers,A.A.
  TITLE     Characterization of four outer membrane proteins involved in
            binding starch to the cell surface of Bacteroides thetaiotaomicron
  JOURNAL   J Bacteriol 182 (19), 5365-5372 (2000)
   PUBMED   10986238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025092.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13715.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..254
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /calculated_mol_wt=29250
     Region          21..104
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
ORIGIN      
        1 mrryfvllfl nfsafllsqn vsgvvtdede ntlpavivfn mqtgekaytd tggkfsikaa
       61 aetelrfvrk gfernfrvvn qsdfknvfnv vltrrpeeie eveishiptg vldqdlknvg
      121 dkkptaklkg etakyirsds apevlaakpg efvqpvgsgf fvgkidnqwd dvdfmnflva
      181 nihpsffled lkltpseiqp fiyyifrnfd rkeilfrgyc tsydlsrfmr ecyrkieayr
      241 knlpnepskk ksrk
//
LOCUS       WP_235143214             208 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class IV [Kaistella sp. 97-N-M2].
ACCESSION   WP_235143214
VERSION     WP_235143214.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 208)
  AUTHORS   Okada,K., Hirotsu,K., Sato,M., Hayashi,H. and Kagamiyama,H.
  TITLE     Three-dimensional structure of Escherichia coli branched-chain
            amino acid aminotransferase at 2.5 A resolution
  JOURNAL   J Biochem 121 (4), 637-641 (1997)
   PUBMED   9163511
REFERENCE   2  (residues 1 to 208)
  AUTHORS   Sugio,S., Petsko,G.A., Manning,J.M., Soda,K. and Ringe,D.
  TITLE     Crystal structure of a D-amino acid aminotransferase: how the
            protein controls stereoselectivity
  JOURNAL   Biochemistry 34 (30), 9661-9669 (1995)
   PUBMED   7626635
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013247.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01063.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..208
                     /product="aminotransferase class IV"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=24443
     Region          1..185
                     /region_name="PLPDE_IV"
                     /note="PyridoxaL 5'-Phosphate Dependent Enzymes class IV
                     (PLPDE_IV). This D-amino acid superfamily, one of five
                     classes of PLPDE, consists of branched-chain amino acid
                     aminotransferases (BCAT), D-amino acid transferases
                     (DAAT), and 4-amino-4-deoxychorismate...; cl00224"
                     /db_xref="CDD:444764"
ORIGIN      
        1 msqfiesikv edqkiflldl hqsrvnktfe hfgkqgsldl aavfknldhn edglyklkit
       61 ydldknvrtq mipyaiseid kislvennvy dysfkfedrk elermkqkak adeiiivknn
      121 hitdtsysni lfkkgkdwyt pstyllngvq rqhllknkki keaeittqnl keyshfqiin
      181 amndfddmfi yplskitnlp etseylqv
//
LOCUS       WP_235143318             706 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxy terminal-processing peptidase [Kaistella sp. 97-N-M2].
ACCESSION   WP_235143318
VERSION     WP_235143318.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023246.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11818.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..706
                     /product="carboxy terminal-processing peptidase"
                     /EC_number="3.4.21.102"
                     /calculated_mol_wt=80551
     Region          48..655
                     /region_name="PRK11186"
                     /note="carboxy terminal-processing peptidase"
                     /db_xref="CDD:236873"
ORIGIN      
        1 mfkklklntl llfipltslv fcfnspkndd dkmstimvsv kntlsylhys pktindayse
       61 dvykhyfemv daskryflqs dmdefakhet klddylnqgd ltfykltvdr lyqrvdeidk
      121 itqdilskpi nlneeetlil epkvkknakn qaelaaewkk yikynilqem esltakeemq
      181 kekkdsvqkf nlkdtiklei ltpeqkrika tsevkdlvtd tfrrfkkrnk mdwftvymna
      241 ytevfdphtn yyspknkedf dtqftgkvig igaiiqekkg flylgalslg apawkskqls
      301 egdkilkvks kpgedavnvv gmlsdeavrl irgekgtkvt ltvekkdkti kevtmvreev
      361 aiedtfarsi ivnsadgkky glinlpsfna dfadakgrna sddvkneiik lktqnvegii
      421 ldlrnngggs ltevgdimgl fmnagpyvqv kdgngkiqtl knktnaplwt gpvvimqnel
      481 sasaseilag amqdygravi igspqsfgkg tvqtfvdlnr flntnddfgs lkltiqkfyr
      541 itgestqrkg iesdikmkdf ftyaeigery ddyalawdki pavafqpvny fsvqalqkgi
      601 esrlannkny qlmqesaewk enldkeetis lnqekfnevm karkaqiekf kalekfnngl
      661 kftlntdeva rekndeaftk ktqnwtknlq rdlylqeavt vaaemk
//
LOCUS       WP_235143346             559 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6909 family protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235143346
VERSION     WP_235143346.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047038.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21850.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..559
                     /product="DUF6909 family protein"
                     /calculated_mol_wt=63550
ORIGIN      
        1 mvnsrarett eaierlyvsm rhlfyrgffk psgisgeslr sllttinpei ygtmgvpnki
       61 eldglmyvld rlpegieecs fihltsdegf ekgsfevivp kkrrrncyri dehqmnievl
      121 lgrseiydil thltflyiea dkirqlafis dendkptraw kiieevakge kkfsrkekev
      181 alihlssllg rtfdetlnay nsfgddnnpd rlfkiiyhlg eesfndskki rerevhfsai
      241 lrervghhff gekwankvkq vlaendlhmr plhiisanmh svknmlyand avskkatkev
      301 dyklyeeisn kkslqekvlt hsqnagliyi ddqsgsnidv qiidlaktdl kntpfsglkf
      361 agddvvmvfd yafgeqayev mdellrpydy ngeiytmkvk sisimgkagi lmggkgdimi
      421 ptshvfegta dnypfenalk ladfeddelq afeggmvtvl gtslqnkdil ryfmdtswka
      481 iglemegahy qkaiqvaski rhhisedlfv myayyasdnp letgstlssg glgltgvkpt
      541 ylitlrilek ilssseskk
//
LOCUS       WP_235143364             319 aa            linear   BCT 02-MAR-2025
DEFINITION  ion channel [Kaistella sp. 97-N-M2].
ACCESSION   WP_235143364
VERSION     WP_235143364.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 319)
  AUTHORS   Choe,S.
  TITLE     Potassium channel structures
  JOURNAL   Nat Rev Neurosci 3 (2), 115-121 (2002)
   PUBMED   11836519
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019500.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07885.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..319
                     /product="ion channel"
                     /calculated_mol_wt=36271
     Region          28..156
                     /region_name="IRK"
                     /note="Inward rectifier potassium channel transmembrane
                     domain; pfam01007"
                     /db_xref="CDD:460023"
     Region          160..>291
                     /region_name="IRK_C"
                     /note="Inward rectifier potassium channel C-terminal
                     domain; pfam17655"
                     /db_xref="CDD:465439"
ORIGIN      
        1 makmkgrfsr lksredsgfs snatgrfvnk ngtpnirrag lshpfekysw yhtlldlpsw
       61 kfilflifgy ilanlgfali yfsigiehlt gidkstplne ftdvfffssq tfttvgygri
      121 apvgflasmv atfeaflgll gfaiatglfy grfsrprafl kfsrialivp fqettalmfr
      181 mapyknnllt danivltcav edveedgtsk skfftletel skintlslnw tvvhkidens
      241 pffdlteedf ktldieifah vrafdevfsn tvvqrtsyvs reneilfaek fnlmyapsrd
      301 qkttilnldl idsyrprsl
//
LOCUS       WP_235143389             886 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Kaistella sp.
            97-N-M2].
ACCESSION   WP_235143389
VERSION     WP_235143389.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 886)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..886
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=99098
     Region          26..87
                     /region_name="CopZ"
                     /note="Copper chaperone CopZ [Inorganic ion transport and
                     metabolism]; COG2608"
                     /db_xref="CDD:442020"
     Region          257..838
                     /region_name="FepA"
                     /note="Outer membrane receptor for ferrienterochelin and
                     colicins [Inorganic ion transport and metabolism];
                     COG4771"
                     /db_xref="CDD:443803"
ORIGIN      
        1 mkillksfll fstlffslps aqtlskakft vrgecdmcke rietsakktg astaywsaet
       61 qnlqiefdag ktsadeilkn iagdghdnek hkapnsaydn lpscchyere nppakmaean
      121 hqiqesqyfv rgncdecker ietaaksaga tgalweaetq kislefdpak tsadlilkki
      181 aevghdnekf lttnqvyrnl pgcclydrdl pfgekgsgvh sdnpapkkdf srngdhydks
      241 ieevrlekfk datalnkksa gltfniggke llkaaccnls esfetnatvd vsfsnavtgt
      301 kqlkmlgldq kytaltkell psirglaapy glnlipgrwi ggiqltkggs tvvngyesit
      361 gqintellkv qekpetalni fadangrvet nitttsqlnd hwnqsvllhg natlgktdsn
      421 ndgfldqptg nqinaaylln yndlehsglg shfgisfvkd erfggqtafd pkeeqsqqta
      481 ygvgidlsrf eiwnktgyvf kdkpyqsigw mnqftthqqd sffgnrnywg nqntfysnlv
      541 fesiigntnn kfktgasfly dkydedylak nyqrtetvpg vffeytltgl kytlvagirs
      601 dfhnlagtqf tprlnfkydl fpktilrlsa grgfrtanif aesqqyfasn reieilengg
      661 ktyglkpeia wnygaslqqe fklfnrkatl vadffrtdfq nqvltdldvs pqkivfynle
      721 gnsfanslqt qldfaparnl eirlaykyyd vradfigger eipfmaknrg ffnasystsk
      781 tgkgafwnld ttlqligrqk lpnlnlnpse yrlpayskgy atlnaqisrn ftknmrvylg
      841 genltgytqk npildaqnpf gnyfdagmvy apimsanvyv gvdftl
//
LOCUS       WP_235143416             187 aa            linear   BCT 02-MAR-2025
DEFINITION  LPS assembly lipoprotein LptE [Kaistella sp. 97-N-M2].
ACCESSION   WP_235143416
VERSION     WP_235143416.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
REFERENCE   1  (residues 1 to 187)
  AUTHORS   Sperandeo,P., Lau,F.K., Carpentieri,A., De Castro,C., Molinaro,A.,
            Deho,G., Silhavy,T.J. and Polissi,A.
  TITLE     Functional analysis of the protein machinery required for transport
            of lipopolysaccharide to the outer membrane of Escherichia coli
  JOURNAL   J Bacteriol 190 (13), 4460-4469 (2008)
   PUBMED   18424520
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016290.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04390.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     gene            1..187
                     /gene="lptE"
     Protein         1..187
                     /product="LPS assembly lipoprotein LptE"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /GO_process="GO:0043165 - Gram-negative-bacterium-type
                     cell outer membrane assembly [Evidence IEA]"
                     /calculated_mol_wt=20961
ORIGIN      
        1 mkrfqvfnfq lqpprirlla lvlaalfsfl lqscysftgs slspetktiq irdfpnnsal
       61 mnpnlaqqfs tdiqnrflqr ttlkgstevp diliegeitd yiispttiss tvnapggniq
      121 aaqnkltitv kvhyenrvep dksfdrtysd eavfssdldi naieatqvkl vneriinkif
      181 ndivanw
//
LOCUS       WP_235143507              64 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2683 family protein [Kaistella sp. 97-N-M2].
ACCESSION   WP_235143507
VERSION     WP_235143507.1
KEYWORDS    RefSeq.
SOURCE      Kaistella sp. 97-N-M2
  ORGANISM  Kaistella sp. 97-N-M2
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Chryseobacterium group; Kaistella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022340.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10884.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..64
                     /organism="Kaistella sp. 97-N-M2"
                     /db_xref="taxon:2908645"
     Protein         1..64
                     /product="DUF2683 family protein"
                     /calculated_mol_wt=7458
ORIGIN      
        1 meslivhpkn qmelnalkdv mkdmgiryek fhtrntktqp fltkntvkkd kparnfkdkp
       61 ktdl
//
LOCUS       WP_235143727             323 aa            linear   BCT 02-MAR-2025
DEFINITION  CBS domain-containing protein [Bifidobacterium moukalabense].
ACCESSION   WP_235143727
VERSION     WP_235143727.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium moukalabense
  ORGANISM  Bifidobacterium moukalabense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 323)
  AUTHORS   Scott,J.W., Hawley,S.A., Green,K.A., Anis,M., Stewart,G.,
            Scullion,G.A., Norman,D.G. and Hardie,D.G.
  TITLE     CBS domains form energy-sensing modules whose binding of adenosine
            ligands is disrupted by disease mutations
  JOURNAL   J Clin Invest 113 (2), 274-284 (2004)
   PUBMED   14722619
REFERENCE   2  (residues 1 to 323)
  AUTHORS   Kemp,B.E.
  TITLE     Bateman domains and adenosine derivatives form a binding contract
  JOURNAL   J Clin Invest 113 (2), 182-184 (2004)
   PUBMED   14722609
REFERENCE   3  (residues 1 to 323)
  AUTHORS   Janosik,M., Kery,V., Gaustadnes,M., Maclean,K.N. and Kraus,J.P.
  TITLE     Regulation of human cystathionine beta-synthase by
            S-adenosyl-L-methionine: evidence for two catalytically active
            conformations involving an autoinhibitory domain in the C-terminal
            region
  JOURNAL   Biochemistry 40 (35), 10625-10633 (2001)
   PUBMED   11524006
REFERENCE   4  (residues 1 to 323)
  AUTHORS   Zhang,R., Evans,G., Rotella,F.J., Westbrook,E.M., Beno,D.,
            Huberman,E., Joachimiak,A. and Collart,F.R.
  TITLE     Characteristics and crystal structure of bacterial
            inosine-5'-monophosphate dehydrogenase
  JOURNAL   Biochemistry 38 (15), 4691-4700 (1999)
   PUBMED   10200156
REFERENCE   5  (residues 1 to 323)
  AUTHORS   Ponting,C.P.
  TITLE     CBS domains in CIC chloride channels implicated in myotonia and
            nephrolithiasis (kidney stones)
  JOURNAL   J Mol Med (Berl) 75 (3), 160-163 (1997)
   PUBMED   9106071
REFERENCE   6  (residues 1 to 323)
  AUTHORS   Bateman,A.
  TITLE     The structure of a domain common to archaebacteria and the
            homocystinuria disease protein
  JOURNAL   Trends Biochem Sci 22 (1), 12-13 (1997)
   PUBMED   9020585
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012780.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00571.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Bifidobacterium moukalabense"
                     /db_xref="taxon:1333651"
     Protein         1..323
                     /product="CBS domain-containing protein"
                     /calculated_mol_wt=35283
     Region          89..148
                     /region_name="DUF2798"
                     /note="Protein of unknown function (DUF2798); pfam11391"
                     /db_xref="CDD:463268"
     Region          174..306
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
     Site            order(175,177..179,201..203,290,302,304,306)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:341358"
     Region          175..263
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
     Site            order(201,213,218..219,222,268,290..292,306)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:341358"
     Region          268..306
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
ORIGIN      
        1 mprngkegil fsfimsaimi yvmaalnygv rtgdvgataw syaffnwpla yvvgmicdlc
       61 ictpssraim nrfcaqtdra vwkgitvkfl mvvlmtvfmt ifgaimafgf sggavagffr
      121 mfpynftial piqmlvvapl sgvivhavgd kagwnraarq rtpkldvetv advmqrevyt
      181 vsdtatvrda ievmldrntg glpvvdgtga vvgfvsdsdv lrrfaqdnlp vsdvstlitg
      241 margefpqls haelmqrnvm eiaankvttv nvdasiaevc qmfgyqqykk lpvvdggrlv
      301 gvinrghltr rsfetcleyr qsa
//
LOCUS       WP_235143748            1058 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 N-terminal domain-containing protein
            [Bifidobacterium moukalabense].
ACCESSION   WP_235143748
VERSION     WP_235143748.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium moukalabense
  ORGANISM  Bifidobacterium moukalabense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 1058)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00933.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Bifidobacterium moukalabense"
                     /db_xref="taxon:1333651"
     Protein         1..1058
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=116428
     Region          <107..502
                     /region_name="PRK15098"
                     /note="beta-glucosidase BglX"
                     /db_xref="CDD:185053"
     Region          723..>948
                     /region_name="BglX"
                     /note="Periplasmic beta-glucosidase and related
                     glycosidases [Carbohydrate transport and metabolism];
                     COG1472"
                     /db_xref="CDD:441081"
ORIGIN      
        1 mndrfhsqml kvfvssrrrs sqkkdmmdqs kkraltvriv ktviavvlaa vivvamvlvn
       61 pqlstnkiis nlmgynhqsv dngggdagga dtnyytadyt kenirkaedk lydqiasegt
      121 vllknddnel paqkgttfsf fsansvdgss ltqgylgtpe tvtlksafta agfkvnetlw
      181 nyyesgaskd yglatgsvny gdgedfrine aplsalrkes glldsvkgtt pvyvlnrvvg
      241 egrdmprsmy nhadkqedke ksyieldste telikylnds ykdvvllvks saameldwlk
      301 eypnikavvy sqnvtnalak vfsgevnpsg ktvdtfaada laspaaqnfg syqyydesgn
      361 atkynyvdya egiyvgykyy etryedkvlg qgsagdydyt kevvypfgyg lsytdfewsd
      421 fsvtadgddf vatvtvrntg dtagkdvvel yaqtpytdyd rrnavekaav nlvgygktae
      481 lepgasetvk itfgrdqlks ydykgartyi ldagqyrfta atdanqainn iladkgkgva
      541 dgmtaegdka mvsswtpent dvdtttfatd aatgkaianl fdaasdpevt yltrsdwtgt
      601 fpkhygesss eintwgnein ckdsdgnnas ctwmktasde likqldgnds gstvdrstit
      661 dtptfgrnng lkvsdmrgld yddeqwnkil dqlteddynq lvyfsgygvd yiksvekpfq
      721 tdadaatgwf yggtgkafps immltqtwna slaedlgvmm gneallggan gwyapamnih
      781 rtpfsgrnge yysedgfmsg smaslevkga atkgvysyik hfalndqenh rgdrpgnfsv
      841 atwsneqair etylkpfdmc mhlgdmdmka vtkksdgtye nttvktpiak gvmtsfnrlg
      901 atwtggnyal iqqllrdewg fngliitdna ntgkfmspyq mleagadikl lnvsedptge
      961 qldfndaaty hyarqamhrl lytvansncm ngalpgagfr fynqmkilql afnvtcgvil
     1021 allaffsvwr wlpgtirrvt arkearaakk aarkaakg
//
LOCUS       WP_235143752             193 aa            linear   BCT 02-MAR-2025
DEFINITION  HTH domain-containing protein [Bifidobacterium moukalabense].
ACCESSION   WP_235143752
VERSION     WP_235143752.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium moukalabense
  ORGANISM  Bifidobacterium moukalabense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042545.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20310.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Bifidobacterium moukalabense"
                     /db_xref="taxon:1333651"
     Protein         1..193
                     /product="HTH domain-containing protein"
                     /calculated_mol_wt=21045
     Region          8..>69
                     /region_name="HTH_Tnp_2"
                     /note="Transposon related HTH domain protein; pfam20310"
                     /db_xref="CDD:466460"
ORIGIN      
        1 magsqglftl keaaylrslp avkevsatri tysdqfkiec vrrylkgesa rkifrdagld
       61 psligakrie rcvarwkttk yivdeaarid andggensad atsserngci daksvldsyn
      121 ianaafaais tskscreifd vrdliiyqqv qqiaalqekv aelqrrieql ggaadvtgml
      181 gvddtaltad wkd
//
LOCUS       WP_235143835             549 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleoside recognition domain-containing protein [Klebsiella
            pneumoniae].
ACCESSION   WP_235143835
VERSION     WP_235143835.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 549)
  AUTHORS   Hantke,K.
  TITLE     Is the bacterial ferrous iron transporter FeoB a living fossil?
  JOURNAL   Trends Microbiol 11 (5), 192-195 (2003)
   PUBMED   12781516
REFERENCE   2  (residues 1 to 549)
  AUTHORS   Loewen,S.K., Ng,A.M., Yao,S.Y., Cass,C.E., Baldwin,S.A. and
            Young,J.D.
  TITLE     Identification of amino acid residues responsible for the
            pyrimidine and purine nucleoside specificities of human
            concentrative Na(+) nucleoside cotransporters hCNT1 and hCNT2
  JOURNAL   J Biol Chem 274 (35), 24475-24484 (1999)
   PUBMED   10455109
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019292.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07670.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..549
                     /product="nucleoside recognition domain-containing
                     protein"
                     /calculated_mol_wt=60438
     Site            8..15
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(10..16,56,111..112,114,139..140)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Region          13..517
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            36
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            38..40
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            53..56
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(55..56,77..78)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            111..114
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
ORIGIN      
        1 mqsfvlmgle sagkstlfni ltesaasder nfrgstvvcr eglindagic lvdtpgirfq
       61 sdsettklal dalnqhdgil vvlrathaqq ewqtlchlip pqakhvvill tfadkirkgl
      121 levteylset sgapvlavna reagsnvrqg ivqlllqdkp apsavslprq kipvinllae
      181 fpqqtifehr wcgkvaaivc lfllfavpvw gawllsdfiq pvidsaviqp lknittswpd
      241 vlktlfvgny glfslglysf vwafpvvvli glslsltdds glkeritatl dpwlrklgls
      301 gqdlipvlsg fgcnvvavfq srscsrctrh acismisfgs acsyqtgatl slfnaahqpw
      361 lfipylsllf itgaihtrlw ngslkpsedq rlteptwlqw prwrnvtwml knilrqfitq
      421 amplfliics vagmldyagi trwvsettap llhlfklpae lmpgiifsll rkdglmvlnq
      481 dggsliqsls tsqllllvwl astlmaclvt vftiareinw rfavavagkq vlsslvvalv
      541 isqlfihea
//
LOCUS       WP_235143846             307 aa            linear   BCT 02-MAR-2025
DEFINITION  TIM barrel protein [Klebsiella pneumoniae].
ACCESSION   WP_235143846
VERSION     WP_235143846.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Fry,J., Wood,M. and Poole,P.S.
  TITLE     Investigation of myo-inositol catabolism in Rhizobium leguminosarum
            bv. viciae and its effect on nodulation competitiveness
  JOURNAL   Mol Plant Microbe Interact 14 (8), 1016-1025 (2001)
   PUBMED   11497462
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013429.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01261.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..307
                     /product="TIM barrel protein"
                     /calculated_mol_wt=34147
     Region          2..303
                     /region_name="VpdB_C"
                     /note="C-terminal fragment of effector protein VpdB;
                     cl30226"
                     /db_xref="CDD:421976"
ORIGIN      
        1 mihpianapc swgvddpknp nlpawatvlk eaaqagyrsi elgpwgylpt dpaslraale
       61 qhqlslvagt ifddlvseah fptlvalthq icrnlsqvaa aepipgrpfq ppylviidfg
      121 nperarfagr galaprlndk dwqrmmehii alstlawqey gvravihpha ggsiefadei
      181 erlandiphd vaglcldtgh lyytgmdpld wldryyhrld ylhfkdvdpq vyqraihegi
      241 dfftacaegv mcplgsgaid ypaikdflar rgyqgwitle qerdprhaag slqavteslr
      301 ylrdvgf
//
LOCUS       WP_235143898             270 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase [Enterobacter hormaechei].
ACCESSION   WP_235143898
VERSION     WP_235143898.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 270)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..270
                     /product="PfkB family carbohydrate kinase"
                     /calculated_mol_wt=29281
     Region          2..264
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
     Site            order(28,224,227)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238177"
     Site            order(168,195,222,225..226,229)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238177"
ORIGIN      
        1 mkvigigdnv vdkyehrrvr ypggnalnfs lyaamldasa aylgifgnda aadhvmrala
       61 kfgidirhcr qvagengyar ltieqgervf lgsnlggvrq tesmdfilqq mdwlndfsli
      121 htssysyida qlpalatlsg wlsydfsddf viaqalplcr wldaaffsca gwslvetrel
      181 lvqavqagsg lavatrgeqg allfdgkdwy qqepetvtpv dtlgagdafi tafllhlrqh
      241 gnitaalqaa ahfaariclv dgafgegeay
//
LOCUS       WP_235143902             385 aa            linear   BCT 02-MAR-2025
DEFINITION  DDE-type integrase/transposase/recombinase [Enterobacter
            hormaechei].
ACCESSION   WP_235143902
VERSION     WP_235143902.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 385)
  AUTHORS   Dyda,F., Hickman,A.B., Jenkins,T.M., Engelman,A., Craigie,R. and
            Davies,D.R.
  TITLE     Crystal structure of the catalytic domain of HIV-1 integrase:
            similarity to other polynucleotidyl transferases
  JOURNAL   Science 266 (5193), 1981-1986 (1994)
   PUBMED   7801124
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012870.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00665.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..385
                     /product="DDE-type integrase/transposase/recombinase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=44241
     Region          10..302
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 mpwtetrpmq rldfiracha gtdsfsalcr ifgisrktgy kwlqrfdpsd lsslsdrsra
       61 phshsrtvpd ditgqltalr qkhpdwgpkk lrmwllnhhv dftvpaasti gdilkreglv
      121 pdkkrkrrtp gnrqplaiis ennqvwsadf kgkfrllsre ychpftltdn hsryllscrg
      181 tdresepfvr qcltdafley glpevlrtdn gqpfagtgia glsrlavwli klgirperir
      241 kghpeengrh ermhrslksa vkqgntfmtm eeqqrwfsdy reefnyerph ealagatpgt
      301 vwqpsgrhwd grvpeyaype ggtvyrvksr gtlymgkkgt vflsealtde yimleeqddg
      361 leaiifngit layydrktqs vlrid
//
LOCUS       WP_235143957             176 aa            linear   BCT 02-MAR-2025
DEFINITION  Kiwa anti-phage protein KwaB-like domain-containing protein
            [Enterobacter hormaechei].
ACCESSION   WP_235143957
VERSION     WP_235143957.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 176)
  AUTHORS   Doron,S., Melamed,S., Ofir,G., Leavitt,A., Lopatina,A., Keren,M.,
            Amitai,G. and Sorek,R.
  TITLE     Systematic discovery of antiphage defense systems in the microbial
            pangenome
  JOURNAL   Science 359 (6379) (2018)
   PUBMED   29371424
REFERENCE   2  (residues 1 to 176)
  AUTHORS   Cuozzo,S.A., Sesma,F., Palacios,J.M., de Ruiz Holgado,A.P. and
            Raya,R.R.
  TITLE     Identification and nucleotide sequence of genes involved in the
            synthesis of lactocin 705, a two-peptide bacteriocin from
            Lactobacillus casei CRL 705
  JOURNAL   FEMS Microbiol Lett 185 (2), 157-161 (2000)
   PUBMED   10754241
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16162.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..176
                     /product="Kiwa anti-phage protein KwaB-like
                     domain-containing protein"
                     /calculated_mol_wt=20083
     Region          <27..153
                     /region_name="DUF4868"
                     /note="Domain of unknown function (DUF4868); cl24669"
                     /db_xref="CDD:474373"
ORIGIN      
        1 mgqrvfalfd ksdkelrafd gsavnfddki dciyiqnqfy vfhkksfesi vgldaeftea
       61 aqktlntike fdlvdgldii eqailhkpsl rktlahiaek gnhttlnkde vqsmngvlkm
      121 fqdeeftind egkivieder qgrnflrlln dyykqgmttk kyygtdsgnl ispvkn
//
LOCUS       WP_235143985             368 aa            linear   BCT 02-MAR-2025
DEFINITION  phage minor head protein [Enterobacter hormaechei].
ACCESSION   WP_235143985
VERSION     WP_235143985.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 368)
  AUTHORS   Vinga,I., Droge,A., Stiege,A.C., Lurz,R., Santos,M.A.,
            Daugelavicius,R. and Tavares,P.
  TITLE     The minor capsid protein gp7 of bacteriophage SPP1 is required for
            efficient infection of Bacillus subtilis
  JOURNAL   Mol Microbiol 61 (6), 1609-1621 (2006)
   PUBMED   16899078
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016148.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04233.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..368
                     /product="phage minor head protein"
                     /calculated_mol_wt=41162
     Region          153..273
                     /region_name="Phage_Mu_F"
                     /note="Phage Mu protein F like protein; cl10072"
                     /db_xref="CDD:447890"
ORIGIN      
        1 marsvndrlq detiahglyv trygtgvarr mvtllnrmda elaarllvll egkradnysa
       61 rrlaslldgv rdlnqqayep vnaalmrelt ryadyetgyq fdlfsslipg qvlkhvplqs
      121 ivpeqvyaaa vaqpfqgrll kewgkklesd rqekitsavr tgflqgetve qivkrvagtp
      181 qlkrqdgvin asrrdlavvt rtavnhvaat arqefaqans divkakqwss tldthtsqwc
      241 iirdrklysl dgkplghaip ylrgpgkihf ccrsceilit ksweelqias gelssatras
      301 mdgqvpshts yaewlvrqpy arqeqvlgvt rarmlrdgki tvpemfndag efltldelrr
      361 vdasafeg
//
LOCUS       WP_235144124            1122 aa            linear   BCT 02-MAR-2025
DEFINITION  tape measure protein [Klebsiella pneumoniae].
ACCESSION   WP_235144124
VERSION     WP_235144124.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040129.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20155.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..1122
                     /product="tape measure protein"
                     /calculated_mol_wt=118298
     Region          68..256
                     /region_name="TMP_3"
                     /note="Tape measure protein; pfam20155"
                     /db_xref="CDD:466312"
     Region          402..>549
                     /region_name="Phage_HK97_TLTM"
                     /note="Tail length tape measure protein; pfam06120"
                     /db_xref="CDD:428779"
     Region          478..1003
                     /region_name="COG5281"
                     /note="Phage-related minor tail protein [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:444092"
ORIGIN      
        1 maenaggiyy diemdvrgll taqqrvnqrl dlmergfdkt srsidtters msslsrvava
       61 ltaalsvqqv aeyadawatv nnklsnslrp seqladvter vfditqqtrs sldataslya
      121 rleratrqyg tsagdlaklt tiinqgfvvs gataqeaena iiqlsqglas galrgeefns
      181 vneqgnrliv aladsmgvsi gqmrnmaaqg klttdvvvng llsqgsviga efanttttis
      241 qalqvagnni tkffgenstv ktgaaifsda vvtisenigg lsalltgvaa ilgsryvgal
      301 tmataakika aaasrtlsae eslaaqasan kaaadlraaa vakqraldei rlaemmrlta
      361 isetnaaaae qrlsvarvaa agavdnynra laanraaqma lssgaslasr algliggpag
      421 aamlaasail yfsqrakear ndanaladsv ndlsskfqtm shtelaatig klsqslpels
      481 davsdaqkkf ndatsavqrq qreianwgtn ttrgrqaaea lsgaqdnlai atlelekaqn
      541 rlsqtqnain igratlngtm kqgidllrrd gqeagiaagm msklgdminf aakakdkfns
      601 sslmvkrpkd vqeyldnlqd qvtlqselnd rkraqlraeq dirklggsea dvnlardraa
      661 aefdaqqaqq nnkkatkeae seakklanqq esvnqklenl rqqselaags tqelsreqav
      721 lqaqqslgkg atqeqialag kyrgeiwdta nalkaqaaae kllpearena syqqdvkdlq
      781 talaakkitq qqynqtseql eaqhqvnlak iraqqtvspm qeargqidpv qqlanqhaqe
      841 laliqqfetq kgqitqrgle lmnaantqye qqriaaqwei wrqqnagyev aaaafdsfag
      901 nasnaltgil tgsmsvseam sslgstvlns vinsfvqmgv ewlksvimgq agmtaasgma
      961 iaqgqliaas mapaaamtsl ataganaipa qagiastvgm aqalsiagar ynggpvsagg
     1021 lyqvgekgkp eiyqastgkq ymipgdngkv isnkdmqsgg gvsvqvnvin qstgatvqsa
     1081 ngymqdgsav vdllitdmer ggpvssqmqq tfglsrkaqg ay
//
LOCUS       WP_235144180             136 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4431 domain-containing protein [Klebsiella pneumoniae].
ACCESSION   WP_235144180
VERSION     WP_235144180.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025838.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14485.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..136
                     /product="DUF4431 domain-containing protein"
                     /calculated_mol_wt=15012
     Region          <17..>43
                     /region_name="Replication protein A, class 2b
                     aminoacyl-tRNA synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold."
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     cl09930"
                     /db_xref="CDD:471953"
     Region          85..127
                     /region_name="DUF4431"
                     /note="Domain of unknown function (DUF4431); pfam14485"
                     /db_xref="CDD:373092"
ORIGIN      
        1 maaspsifcf mivfsrfsts atclkegdkv sltgvvsekl yygppgwgen kandeklhew
       61 ilhlkqpltc vtdadtdnqn wnhdvqlimr dsndykanks llgkivsidg viflaetgyh
      121 mtpvllddak fevagk
//
LOCUS       WP_235144195             257 aa            linear   BCT 02-MAR-2025
DEFINITION  chemotaxis protein CheW [Photobacterium carnosum].
ACCESSION   WP_235144195
VERSION     WP_235144195.1
KEYWORDS    RefSeq.
SOURCE      Photobacterium carnosum
  ORGANISM  Photobacterium carnosum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
REFERENCE   1  (residues 1 to 257)
  AUTHORS   Bilwes,A.M., Alex,L.A., Crane,B.R. and Simon,M.I.
  TITLE     Structure of CheA, a signal-transducing histidine kinase
  JOURNAL   Cell 96 (1), 131-141 (1999)
   PUBMED   9989504
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013731.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01584.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Photobacterium carnosum"
                     /db_xref="taxon:2023717"
     Protein         1..257
                     /product="chemotaxis protein CheW"
                     /GO_process="GO:0006935 - chemotaxis [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=28843
     Region          <18..92
                     /region_name="Trypan_PARP"
                     /note="Procyclic acidic repetitive protein (PARP);
                     pfam05887"
                     /db_xref="CDD:368653"
     Region          108..245
                     /region_name="CheW"
                     /note="Chemotaxis signal transduction protein CheW [Signal
                     transduction mechanisms]; COG0835"
                     /db_xref="CDD:440597"
ORIGIN      
        1 mnkkpltseq alddyfgdll letdpqpive ikptvfceps asqqlqqlla qipsqldvep
       61 lvvavidaep epepepepep epepepepep epepepepef vawqhhgqqq pfqslffevn
      121 gmmfavalte lgaiyqlgel nhivgrpawy lglaplpqyn vdvvdtahwv madkltndhy
      181 rdnyrymvml gnsqwglacd klhgtqtlmt tdirwreqag krpwlagmvk qkmcalihvd
      241 aliqmlnkgl dvnsgas
//
LOCUS       WP_235144207             794 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Photobacterium carnosum].
ACCESSION   WP_235144207
VERSION     WP_235144207.1
KEYWORDS    RefSeq.
SOURCE      Photobacterium carnosum
  ORGANISM  Photobacterium carnosum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
REFERENCE   1  (residues 1 to 794)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 794)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 794)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 794)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..794
                     /organism="Photobacterium carnosum"
                     /db_xref="taxon:2023717"
     Protein         1..794
                     /product="ATP-binding protein"
                     /calculated_mol_wt=89299
     Region          6..790
                     /region_name="COG4192"
                     /note="Signal transduction histidine kinase regulating
                     phosphoglycerate transport system [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443346"
ORIGIN      
        1 mircvknnti gnrltsaiil mafltisvsv iaaltwqqls qqigtitndn mptlrssyrl
       61 erstaelqaa ltaldmntnp lkhktikkni vsilnairqs idnisslyyy pkiksgqqll
      121 ianidsyial lqqrntlrfs lkqtentikw lhqdlidelq plrleiewqm mqllntpqql
      181 qlkhdtnikn imaefsviqt itvnvnelhq liedsilhrq qndintsfda iakkilqlnk
      241 iskqlnnyps tityrqlqqe ftqlvtpngh lqklliqdni nnikitqtqr nirnqltqqe
      301 niiqtlvgha dnalaklngk trrsiwignl ilfgvvfiti ilsvilsiyl vgrgivkrln
      361 llgqdlqaia sgnlnaniqt tgvdeigilg dnlryfcqqm qeiqnsnaln linntqasii
      421 tcdlngaves vnpqalkqln fcnvtkkhqv wnlfnsstlt tlqhlftang plmtngaynm
      481 tvklvakngh glylrldfrt ftqgnddkvi itmtditeqe nttrwlestv aektqsltir
      541 nqqlrdeied rkriegdlie tqdeliqaak mavvgqtmts lahelnqpls aistrifsak
      601 laldhkkyen lptnltkidd lvtrmsklii nfrnfakkqs atkplskvdi qdsikqalil
      661 vesrakvqkt tmvntidypl yaladqvqle qilinllvns cdavanckqr eitiiqlnsp
      721 snkirlavyd sgdgfdaaii nklfipfttt kdvglglgls icgsimtrlk geiflasnlt
      781 ggamvvleln kydk
//
LOCUS       WP_235144242             265 aa            linear   BCT 02-MAR-2025
DEFINITION  aspartate dehydrogenase domain-containing protein [Jeotgalibaca sp.
            MA1X17-3].
ACCESSION   WP_235144242
VERSION     WP_235144242.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 265)
  AUTHORS   Yang,Z., Savchenko,A., Yakunin,A., Zhang,R., Edwards,A.,
            Arrowsmith,C. and Tong,L.
  TITLE     Aspartate dehydrogenase, a novel enzyme identified from structural
            and functional studies of TM1643
  JOURNAL   J Biol Chem 278 (10), 8804-8808 (2003)
   PUBMED   12496312
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014063.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01958.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..265
                     /product="aspartate dehydrogenase domain-containing
                     protein"
                     /GO_function="GO:0033735 - aspartate dehydrogenase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=28758
     Region          6..265
                     /region_name="AspD"
                     /note="L-aspartate dehydrogenase, NAD(P)-dependent [Amino
                     acid transport and metabolism]; COG1712"
                     /db_xref="CDD:441318"
ORIGIN      
        1 mdyekkrlal lgcgylnqiv anavidgtlp eyeivgvlar nskkakvfad hfgcvaysni
       61 eqlmdlkpdf vaeaasgqav tdyaetilsg gsniiilsaa pladtkffeq ikktaeennv
      121 kiylpggatg aynllqtaal msktpidvti tskksphfin rtlfnseklm eitkpervft
      181 gsakdilein pyvfnvifst syasagledt kfnidatpqf sgddyrievi gddvqldlni
      241 lsqdysiagw sivailknaa stvvf
//
LOCUS       WP_235144265             176 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing protein [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235144265
VERSION     WP_235144265.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 176)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01966.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..176
                     /product="HD domain-containing protein"
                     /calculated_mol_wt=20487
     Region          22..>142
                     /region_name="RnaY"
                     /note="HD superfamily phosphodieaserase, includes HD
                     domain of RNase Y [Translation, ribosomal structure and
                     biogenesis, General function prediction only]; COG1418"
                     /db_xref="CDD:441028"
ORIGIN      
        1 msmndwkkde efllyvtdll ereevkklee itqhyhstrl ehsisvsyhs fciarkfkld
       61 kraiaragll hdlfyydwrt tkfdegthay mhpriacana ekltvlsdle kdiiikhmwg
      121 atmalpkyke sfvvtmvdky cacheamapt lvkskknfrs kwasikssil ansitf
//
LOCUS       WP_235144396            1092 aa            linear   BCT 02-MAR-2025
DEFINITION  prophage tail fiber N-terminal domain-containing protein
            [Escherichia coli].
ACCESSION   WP_235144396
VERSION     WP_235144396.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019996.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08400.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1092
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..1092
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
                     /calculated_mol_wt=108492
     Region          1..124
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
     Region          <460..537
                     /region_name="COG5301"
                     /note="Phage-related tail fiber protein [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:444101"
     Region          462..499
                     /region_name="Phage_fiber_2"
                     /note="Phage tail fibre repeat; pfam03406"
                     /db_xref="CDD:427282"
     Region          866..913
                     /region_name="Collar"
                     /note="Phage Tail Collar Domain; pfam07484"
                     /db_xref="CDD:429485"
ORIGIN      
        1 mavkisgvlk dgtgkpvqnc tiqlkakrns tavvvntlas enpdeagrys mdveygqysv
       61 illvegfpps hagtitvyed srpgtlndfl gamteddarp ealrrfelmv eevarnasav
      121 aqntaaakks asdastsase aathatdaag saraastsag qaassaqsas ssagtasaka
      181 teasksaaaa essksaaats asaaktsetn aaasqqsaat sastattkas eaatsardas
      241 askvaaksse tnasssassa assataagns akaaktsetn arssetaagq sasaaagskt
      301 aaassasaas tsagqasaca saagksaesa assastattk ageateqasa aarsasaakt
      361 setnakaset saessktaaa ssassaassa ssasaskdea trqasaakgs aatastkate
      421 aagsataasq sktaaesaat raeaaadrae eiagavamed aslttkgvvk lssavdstse
      481 slaatpkavk aandnansrv psnrkvngka ltaditltpk digtlnsvtm sfsggdgwfk
      541 latvtmpqas sivyialigg agynvgsphq agiselvlra gngnpkgitg alwkrtavgl
      601 tnfawintsg dtydiyveig nyatsvnihw dctanasvsv ytsptysask pssvtygvvy
      661 tmysshqkpt psdigalptt ggtvsgplsv tggltgslng nastatklqt arsiggvvfd
      721 gsaninlpgv nttgnqnttg naatatklqt arkisgvpfd gstditltaa hvaafarrat
      781 dtyadadggv pwnaesgayn vtrsgdsyil vnfytgvgsc rtlqmkahyr ngglfyrssr
      841 dgygfeedwa evytsknlpp esypvgapip wpsdtvpsgy almqgqtfdk saypklaaay
      901 psgvipdmrg wtikgkpasg ravlsqeqdg ikshthsasa sstdlgtktt ssfdygtkst
      961 nntgahthsi sgtansagah qhkssgafgg tntsifpngy taisnlsagi msttsgsgqt
     1021 rnagktssdg ahthslsgta asagahahtv gigahthsva igshghtitv naagnaentv
     1081 kniafnyivr la
//
LOCUS       WP_235143739             931 aa            linear   BCT 02-MAR-2025
DEFINITION  X2-like carbohydrate binding domain-containing protein
            [Bifidobacterium moukalabense].
ACCESSION   WP_235143739
VERSION     WP_235143739.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium moukalabense
  ORGANISM  Bifidobacterium moukalabense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 931)
  AUTHORS   Kosugi,A., Amano,Y., Murashima,K. and Doi,R.H.
  TITLE     Hydrophilic domains of scaffolding protein CbpA promote glycosyl
            hydrolase activity and localization of cellulosomes to the cell
            surface of Clostridium cellulovorans
  JOURNAL   J Bacteriol 186 (19), 6351-6359 (2004)
   PUBMED   15375114
REFERENCE   2  (residues 1 to 931)
  AUTHORS   Mosbah,A., Belaich,A., Bornet,O., Belaich,J.P., Henrissat,B. and
            Darbon,H.
  TITLE     Solution structure of the module X2 1 of unknown function of the
            cellulosomal scaffolding protein CipC of Clostridium cellulolyticum
  JOURNAL   J Mol Biol 304 (2), 201-217 (2000)
   PUBMED   11080456
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015407.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03442.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..931
                     /organism="Bifidobacterium moukalabense"
                     /db_xref="taxon:1333651"
     Protein         1..931
                     /product="X2-like carbohydrate binding domain-containing
                     protein"
                     /calculated_mol_wt=99720
     Region          736..822
                     /region_name="CBM_X2"
                     /note="Carbohydrate binding domain X2; pfam03442"
                     /db_xref="CDD:427295"
     Region          <815..909
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
ORIGIN      
        1 mhvkirraai aavaacsmll pvgvtsatet pgltvnqgag ytatkishpn adlgendgiv
       61 nvdangtstv adgdadrgqn yswasvgygd wmyvgtcysa mgstlklman tmgttykklk
      121 aaldvafnge mfldngenhs lllkintktg kvkivvdpiq katgadlnvn gyraaiefhd
      181 klyfaaaaqg spyllevdpt tdktqivyqa tgvasgisvg irglavlngq liasmigteg
      241 ayivsssnps agadsfttia tqqdlldypa yhytdnifgg aiwdmvafng klyitvvtgk
      301 gsnkqsfalf rgeqnadesw tytplvgdpk dgahyeygfg adrsgaanlv vykdhlyigg
      361 yndpmvalpd alefnfesly ddlsspvnlw rmdadenfel vagesnnkyf gepvgtidge
      421 tmraglgsds dmsrhlnqyv wrmqaydgkm yagtfdisdl aypvtqfang dvlkrtpeqw
      481 kkqieyikef lkllkadgng ssttaesssl eatkpedgnv dgdadatagd daedgaaaqs
      541 qdnaadeqrm adniasegkt sevianltem rklldnmrnd leskqtdvdi deasaqsddy
      601 tlddrfqfqr wlnkllalyn snkqylpesi taeldkwltq dnvdnftyfv gvcnylhyat
      661 sdkrgcdlvv tsdglnfqti trngfgdnnn hglrvfavtn sglsigtanp yhgtqiwkld
      721 dgkgdavnae ladgdaytyd kydtqakaan qqglsvgitf ngntvedvqy dyaslkaged
      781 yvvnedgsgi tltsaflnak etgstgsvvv ffnrgararf tveikdgtpg asqpakpses
      841 ttkpadqakp sdqtkpadrt esaestakps esakpsesak tagqttqsaa ksaanvanti
      901 astgsnvwgm vlavavlala ggvmlvlrrr g
//
LOCUS       WP_235144482             274 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235144482
VERSION     WP_235144482.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 274)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..274
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=31896
     Region          2..249
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Site            order(8,10,45,74..75,185,229)
                     /site_type="active"
                     /db_xref="CDD:277317"
     Site            order(8,10,45,74,185,229)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277317"
ORIGIN      
        1 mkigvlsdlh idmnekklei gqkydrllad llynneidll llagdissdy hdslkfldqm
       61 aehdvseilf vpgnhdfwsi rngetntkei ykafqdrees pvrnpfiind qtaivgnpgw
      121 ydygfasdky stvefenkkl kvggwndrlf vhwnepdqvv aqqmldqien diqlvgdrei
      181 ilmthvvthp qfvvplpnri ydyynaflga ksyyslyeky pikhsimghv hfrktlieng
      241 iqyycsclgn gkhwytnday telsytletf line
//
LOCUS       WP_235144475             228 aa            linear   BCT 02-MAR-2025
DEFINITION  SatD family protein [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235144475
VERSION     WP_235144475.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 228)
  AUTHORS   Kremer,B.H., van der Kraan,M., Crowley,P.J., Hamilton,I.R.,
            Brady,L.J. and Bleiweis,A.S.
  TITLE     Characterization of the sat operon in Streptococcus mutans:
            evidence for a role of Ffh in acid tolerance
  JOURNAL   J Bacteriol 183 (8), 2543-2552 (2001)
   PUBMED   11274114
REFERENCE   2  (residues 1 to 228)
  AUTHORS   Gutierrez,J.A., Crowley,P.J., Cvitkovitch,D.G., Brady,L.J.,
            Hamilton,I.R., Hillman,J.D. and Bleiweis,A.S.
  TITLE     Streptococcus mutans ffh, a gene encoding a homologue of the 54 kDa
            subunit of the signal recognition particle, is involved in
            resistance to acid stress
  JOURNAL   Microbiology (Reading) 145 (Pt 2), 357-366 (1999)
   PUBMED   10075418
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16264.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..228
                     /product="SatD family protein"
                     /calculated_mol_wt=25846
     Region          10..201
                     /region_name="SatD"
                     /note="SatD family (SatD); pfam16264"
                     /db_xref="CDD:435244"
ORIGIN      
        1 mtkkeqeply aaiigdikds rkildrknvq ekfhsvlqki nekyaedias eflitlgdsf
       61 qgllknkkvi fniifeiela mapvsfrfgi glgtisteiq rdnsmemdgs ayhrarkmie
      121 tveenekkyt qsetntmils gegnqqtdql lntilslata lkskwserqr eiiyayfiqe
      181 enqyktaetl gigqssvnka lniakyytyk tallnasnfl spnckegd
//
LOCUS       WP_235144506             548 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphoenolpyruvate carboxykinase (ATP) [Jeotgalibaca sp.
            MA1X17-3].
ACCESSION   WP_235144506
VERSION     WP_235144506.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 548)
  AUTHORS   Tari,L.W., Matte,A., Pugazhenthi,U., Goldie,H. and Delbaere,L.T.
  TITLE     Snapshot of an enzyme reaction intermediate in the structure of the
            ATP-Mg2+-oxalate ternary complex of Escherichia coli PEP
            carboxykinase
  JOURNAL   Nat Struct Biol 3 (4), 355-363 (1996)
   PUBMED   8599762
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013461.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01293.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..548
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /EC_number="4.1.1.49"
                     /GO_function="GO:0004612 - phosphoenolpyruvate
                     carboxykinase (ATP) activity [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /calculated_mol_wt=62143
     Region          49..527
                     /region_name="PEPCK_HprK"
                     /note="Phosphoenolpyruvate carboxykinase (PEPCK), a
                     critical gluconeogenic enzyme, catalyzes the first
                     committed step in the diversion of tricarboxylic acid
                     cycle intermediates toward gluconeogenesis. It catalyzes
                     the reversible decarboxylation and...; cl22860"
                     /db_xref="CDD:473983"
ORIGIN      
        1 matierfeks dlkksnplls kfrttietaf ygnnmvelld vakayhlslh sdntivtdlp
       61 vlhtkelglp ddakilveng gkifgrtaqa rrivgenkee dnllegiird viyhnshkky
      121 ykttgyvgld pdfmvkahia fpegyennly swllnfqstn pqynamykds isypdgdiyi
      181 yadpdwthpd ypmglayfep drnvacilgm qyfgefkkgt ltlawatghr nhyvachggq
      241 ksfhiddgst yvasffglsg sgkstlthak henkyeikvl hddaflinlk dgssialeps
      301 yfdktqdypa dhpeqnyfvt vqnvgvtldv dgnkvlvted irngngrtvk srystpnrvd
      361 kftdpinavy wimkdesmpp lvkisdpvvg atfgatlatk rtsaenikkg esadqlviep
      421 yanpfrvypl sedfkdftel lnrknmecyi intgyfldkk ipkeitlqai eemvektgef
      481 lpfgevkgms ylsmegfqpd ftdstykklv kermdmrlef letfnkshpd eplpieaiqs
      541 vkeiidsl
//
LOCUS       WP_235144568             232 aa            linear   BCT 02-MAR-2025
DEFINITION  PHP domain-containing protein [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235144568
VERSION     WP_235144568.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 232)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014826.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02811.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..232
                     /product="PHP domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=26405
     Region          2..>230
                     /region_name="DnaE"
                     /note="DNA polymerase III, alpha subunit [Replication,
                     recombination and repair]; COG0587"
                     /db_xref="CDD:440352"
ORIGIN      
        1 msfvhlqtis vysllqsttq leklvqnakq kgyqaialtd ynylhgqvdf yklclqegik
       61 piiglqleip gvfyknqkfp lvmiaknyrg yqklmalstl ytsdkndeal lsglkdgled
      121 iiaitpgekg eierlllsge qeeaeaitrh wkeifseeqf ylgvqvhqkm qpiidslrrl
      181 gtvvevplta mhdvqylepd drfscrvlqa ignseqidte qeekkesttf ll
//
LOCUS       WP_235144574              80 aa            linear   BCT 02-MAR-2025
DEFINITION  YlbF family regulator [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235144574
VERSION     WP_235144574.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 80)
  AUTHORS   Carabetta,V.J., Tanner,A.W., Greco,T.M., Defrancesco,M.,
            Cristea,I.M. and Dubnau,D.
  TITLE     A complex of YlbF, YmcA and YaaT regulates sporulation, competence
            and biofilm formation by accelerating the phosphorylation of Spo0A
  JOURNAL   Mol Microbiol 88 (2), 283-300 (2013)
   PUBMED   23490197
REFERENCE   2  (residues 1 to 80)
  AUTHORS   Hamze,K., Julkowska,D., Autret,S., Hinc,K., Nagorska,K.,
            Sekowska,A., Holland,I.B. and Seror,S.J.
  TITLE     Identification of genes required for different stages of dendritic
            swarming in Bacillus subtilis, with a novel role for phrC
  JOURNAL   Microbiology (Reading) 155 (Pt 2), 398-412 (2009)
   PUBMED   19202088
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017902.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06133.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..80
                     /product="YlbF family regulator"
                     /calculated_mol_wt=9483
     Region          <6..76
                     /region_name="YmcA"
                     /note="Cell fate regulator YmcA, YheA/YmcA/DUF963 family
                     (controls sporulation, competence, biofilm development)
                     [Signal transduction mechanisms]; cl42632"
                     /db_xref="CDD:478348"
ORIGIN      
        1 mihnvieqik ekqkelvhfe yfekpmayqk tlkqlttlne lldenisvqa ykeslweane
       61 lvqmlfeqiq davverekns
//
LOCUS       WP_235144598             119 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Jeotgalibaca sp.
            MA1X17-3].
ACCESSION   WP_235144598
VERSION     WP_235144598.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024776.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13384.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..119
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=13519
     Region          79..>118
                     /region_name="HTH_40"
                     /note="Helix-turn-helix domain; pfam14493"
                     /db_xref="CDD:464189"
ORIGIN      
        1 melwmiviil laiaiillfi sffsknkdsa mtaeitdftl qmtkdlrslk krvveleeas
       61 gitvpqeevt gpkkineltk qqtirlyeqg ntfdeiaekl eipettvqli vdnhlenlq
//
LOCUS       WP_235144603             262 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1189 family protein [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235144603
VERSION     WP_235144603.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018406.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06691.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..262
                     /product="DUF1189 family protein"
                     /calculated_mol_wt=29708
     Region          9..250
                     /region_name="DUF1189"
                     /note="Protein of unknown function (DUF1189); cl23976"
                     /db_xref="CDD:474120"
ORIGIN      
        1 miiislytll fnsfldpshl wkatelkrkk tvylflltsl ivgipffisn mnavatiekd
       61 isrvttkipa fviedgtvnv kdplekalvv rtdslnfifd ihnqydelek ekdventiln
      121 llftedsftl ltnqvpinip yenadgftde fftsllsrfs tkntitvitm ivlsflsgmf
      181 eaairlllft iignlvsalf rirlpfsvnw kimmvasfvp tilfsllnsv lifpygqtgi
      241 igvisaflyy kgikifiekq ik
//
LOCUS       WP_235144461             209 aa            linear   BCT 02-MAR-2025
DEFINITION  YkyA family protein [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235144461
VERSION     WP_235144461.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 209)
  AUTHORS   Wei,W., Cao,Z., Zhu,Y.L., Wang,X., Ding,G., Xu,H., Jia,P., Qu,D.,
            Danchin,A. and Li,Y.
  TITLE     Conserved genes in a path from commensalism to pathogenicity:
            comparative phylogenetic profiles of Staphylococcus epidermidis
            RP62A and ATCC12228
  JOURNAL   BMC Genomics 7, 112 (2006)
   PUBMED   16684363
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021854.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10368.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..209
                     /product="YkyA family protein"
                     /calculated_mol_wt=23829
     Region          21..199
                     /region_name="YkyA"
                     /note="Putative cell-wall binding lipoprotein; pfam10368"
                     /db_xref="CDD:431235"
ORIGIN      
        1 mkknfkwliv vgsillagct nqiqnvqkev dlvssekeei vvslntiqnk emeiqgdfde
       61 slltdaelkn fqdesalvfe nvesreeevq klkkvleevq tdvedlnafe eeslpleqis
      121 sltqtieein kimdayisty enqlseekvv fqslgeeead fdtlyngvds lnemsdqnle
      181 slrpladlfn qfdeqvnqls eslteetek
//
LOCUS       WP_235144665             196 aa            linear   BCT 02-MAR-2025
DEFINITION  energy-coupled thiamine transporter ThiT [Jeotgalibaca sp.
            MA1X17-3].
ACCESSION   WP_235144665
VERSION     WP_235144665.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021062.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09515.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..196
                     /product="energy-coupled thiamine transporter ThiT"
                     /GO_component="GO:0005886 - plasma membrane [Evidence
                     IEA]"
                     /GO_function="GO:0015234 - thiamine transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0015888 - thiamine transport [Evidence
                     IEA]"
                     /calculated_mol_wt=21262
     Region          22..178
                     /region_name="ECF_trnsprt"
                     /note="ECF transporter, substrate-specific component;
                     cl21488"
                     /db_xref="CDD:473881"
ORIGIN      
        1 mgsnslrgwm evvvfavvat visffpvtig eyslvlaglp lifislrrgl lqgliaggla
       61 gilfllfkeg spdlsenivt qfgplafigi tglfakytqr tlnnkrysna alnivtasfi
      121 gmllyfvwvi vgslffttev sssesnlfsm yglsfllsvv gtavvlllla kfapklfipr
      181 dtsflsrkek srllnd
//
LOCUS       WP_235144674             225 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-hairpin-helix domain-containing protein [Jeotgalibaca sp.
            MA1X17-3].
ACCESSION   WP_235144674
VERSION     WP_235144674.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 225)
  AUTHORS   Witte,G., Hartung,S., Buttner,K. and Hopfner,K.P.
  TITLE     Structural biochemistry of a bacterial checkpoint protein reveals
            diadenylate cyclase activity regulated by DNA recombination
            intermediates
  JOURNAL   Mol Cell 30 (2), 167-178 (2008)
   PUBMED   18439896
REFERENCE   2  (residues 1 to 225)
  AUTHORS   Doherty,A.J., Serpell,L.C. and Ponting,C.P.
  TITLE     The helix-hairpin-helix DNA-binding motif: a structural basis for
            non-sequence-specific recognition of DNA
  JOURNAL   Nucleic Acids Res 24 (13), 2488-2497 (1996)
   PUBMED   8692686
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12836.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..225
                     /product="helix-hairpin-helix domain-containing protein"
                     /calculated_mol_wt=25207
     Region          <82..>117
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          101..223
                     /region_name="comE"
                     /note="comEA protein; TIGR01259"
                     /db_xref="CDD:213597"
ORIGIN      
        1 mmgewrsris ehkqlirlgi iivqffviif ilgkwmmgty lsannheidp nllvgslvps
       61 sselvsvsdm veteettkkw mvdikgevqf pgiyevdqdm rindvifmag glssdadigs
      121 lnlaqlvqdq mvihvfhqkd qmideetlvv qtpvmetnke nlinintaps adlqqlngig
      181 emkaekiisy reenglfksi eelmevsgig ektfetikdk vtvsp
//
LOCUS       WP_235144681              98 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1507 family protein [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235144681
VERSION     WP_235144681.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019054.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07408.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..98
                     /product="DUF1507 family protein"
                     /calculated_mol_wt=11139
     Region          2..91
                     /region_name="DUF1507"
                     /note="Protein of unknown function (DUF1507); cl26898"
                     /db_xref="CDD:474865"
ORIGIN      
        1 memvskdivm kilkedtqki ytlidsqkeh lcfatcpafd evvdtqlfgl skqiefaikl
       61 gvlekdegyq iiseleysln dmyssyyqqt napqakge
//
LOCUS       WP_235144679             345 aa            linear   BCT 02-MAR-2025
DEFINITION  CAP-associated domain-containing protein [Jeotgalibaca sp.
            MA1X17-3].
ACCESSION   WP_235144679
VERSION     WP_235144679.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 345)
  AUTHORS   Ivanciuc,O., Garcia,T., Torres,M., Schein,C.H. and Braun,W.
  TITLE     Characteristic motifs for families of allergenic proteins
  JOURNAL   Mol Immunol 46 (4), 559-568 (2009)
   PUBMED   18951633
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025857.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14504.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..345
                     /product="CAP-associated domain-containing protein"
                     /calculated_mol_wt=40136
     Region          61..201
                     /region_name="CAP_assoc_N"
                     /note="CAP-associated N-terminal; pfam14504"
                     /db_xref="CDD:433999"
ORIGIN      
        1 mkkivfvlsi fflfvlyyfp ivydevlknp lqetkqlste mtqkeeddvh plpvtgfehy
       61 iglpiedyve rhgpplrtgp snfgaewwtf avhpeeyvqi evkngivrsi fvmgedvntg
      121 pirigmtqen iydeteltdy fsfqsegiey elsltkddle vfpliyfenn sfvmlffhpe
      181 rdnvyglryl saeallqtny ysimseeedp sfiypltnek nklvlsekee qllalfsimr
      241 qqsgaaslsq vaqmeqpdes tpqinmenyf ssekemsesi qsieeldrhd kakeveyvng
      301 hgvfdtpiqf gifmrdshnr elllneawke lsikameddf vilfn
//
LOCUS       WP_235144705             381 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235144705
VERSION     WP_235144705.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 381)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 381)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..381
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=44011
     Region          13..57
                     /region_name="Arm-DNA-bind_4"
                     /note="Arm DNA-binding domain; pfam14657"
                     /db_xref="CDD:464242"
     Region          65..375
                     /region_name="XerD"
                     /note="Site-specific recombinase XerD [Replication,
                     recombination and repair]; COG4974"
                     /db_xref="CDD:443999"
     Region          178..362
                     /region_name="INT_ICEBs1_C_like"
                     /note="C-terminal catalytic domain of integrases from
                     bacterial phages and conjugate transposons; cd01189"
                     /db_xref="CDD:271189"
     Site            order(181..182,185,202,257,259,333..334,337..338,347)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:271189"
     Site            order(209,324,327..328,360)
                     /site_type="active"
                     /db_xref="CDD:271189"
ORIGIN      
        1 mikeylkkdg skafmftayl gvdpltgkqr rttrrgfstr keaslaksrl lvdveengiq
       61 kqnkttfqel yvlwyesayk dtvkestrvk tkelfdlhil pafgtskidk isikacqlvv
      121 nqwckrfvky rsmkaytskv ldyavtlemi rdnpmkkivm pkkieevdee vienyytkee
      181 lqtfliccke dlasewftff rllafsglrk seafaltwkd idfkgktvsi skalargeqn
      241 rliiqspknk ssvrtismda ttlailkewr keqaitmlky ghntmndtql vfststnkfi
      301 dpnasfrhie kviqlnglsk itthglrhth csllfesdap iqvvkerlgh sdiqttmniy
      361 thvteksked taekfaqyvn f
//
LOCUS       WP_235144762             145 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1617 family protein [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235144762
VERSION     WP_235144762.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019381.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07761.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..145
                     /product="DUF1617 family protein"
                     /calculated_mol_wt=16975
ORIGIN      
        1 mkkmvlqkqe akplveflqg lvlknkisrl rnkliknlst itqeleeerv elvkehsekd
       61 eqgepiiene qykvfdmeal neqvqelfae evaietgeys snfqplfehl dsedfdmels
      121 gieanrydrl ldiwenaqtq teeel
//
LOCUS       WP_235144796             233 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235144796
VERSION     WP_235144796.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024118.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12706.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..233
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=26362
     Region          6..132
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(48,50,52..53,108..109,131)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 mitidvigss skgnayline gersllleag mnlkgidlst tdgclitheh gdhskyamdi
       61 ikktgmdiyl smgtqealql pkhrikmvqa fkefkvgswl vlpfptehdv neplgffiqs
      121 kegecilfat dtfyirytfp gvthmliecn yaldilnenv hsgrignylk kriltshfel
      181 nnvknfllsn dlshlkevwl lhlsnnnade grfkkeiqei tgipvyiase rke
//
LOCUS       WP_235144798             676 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235144798
VERSION     WP_235144798.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024867.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13476.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..676
                     /product="AAA family ATPase"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /GO_process="GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /calculated_mol_wt=78458
     Region          8..213
                     /region_name="AAA_23"
                     /note="AAA domain; pfam13476"
                     /db_xref="CDD:463890"
     Region          30..>523
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
ORIGIN      
        1 mkiklmkmki rnfkavkefd fnpegenasi ygqmgtgkst iydafwfalf gknslgdskf
       61 qwkpkdknne sihhleteiq lvlevngeev tlsrmvsenw vrktgssnee yqgdvttcri
      121 nglkkkvsdy kkyidslide etfkqltnvy yfsdvmkdke rrkmlfelvg nlddnavihs
      181 kksleplkef lkgisvddkr eqlieerskt nadikewdir ideadrnipi iddlnedelk
      241 kekeeslqke dslyqelstl knggfiskkr selsecdsqi mvmkndyqln irnaaselie
      301 kkqtvysqfl eaknkvqgly tsirdiqgdk dwtrkqlvmn ekqveelrne ykkihskqie
      361 pfdehvlvct ycnrpfdeee qediqatyee eaktfntkka enlesinetg kavsekttqf
      421 kediegfdek ieklekqsee seqeadrlyi elkklerqie ekktsitpfe eteayiemiq
      481 kkkmiqseid neqqsiatst vgiqeeikev keniarined lskftslgks kerkddlise
      541 qkektirage iekwlfllde ftrtkvsllt erinsefeit qfklfeplqn gslkevcepl
      601 fkgleftgai sngervnvgi diintisrlk gvhvpifidn aesvtvwhie psnqaiklia
      661 qegqtklnik ndkgaa
//
LOCUS       WP_235144863             232 aa            linear   BCT 02-MAR-2025
DEFINITION  DsbA family protein [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235144863
VERSION     WP_235144863.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025119.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13743.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..232
                     /product="DsbA family protein"
                     /calculated_mol_wt=27359
     Region          22..199
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 myrqqkknat pisssqqiye lylfvnpigl kcyrteqevl rfiedredik ihfrfitfhn
       61 fntvtqymkr lnlppnnlql rnqmyhsiyd aslaykaalm qgkkrgrnfl lllqkelttn
      121 preygndllr evaidarldv emffedkksg fvkssyeadq hiaqemniqc npslvifdny
      181 nqqygvlled titydlieea fnhsdalsks kdlllmnenv rmigkeylrv ik
//
LOCUS       WP_235144894             122 aa            linear   BCT 02-MAR-2025
DEFINITION  PepSY domain-containing protein [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235144894
VERSION     WP_235144894.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 122)
  AUTHORS   McIver,K.S., Kessler,E. and Ohman,D.E.
  TITLE     Identification of residues in the Pseudomonas aeruginosa elastase
            propeptide required for chaperone and secretion activities
  JOURNAL   Microbiology (Reading) 150 (Pt 12), 3969-3977 (2004)
   PUBMED   15583150
REFERENCE   2  (residues 1 to 122)
  AUTHORS   Yeats,C., Rawlings,N.D. and Bateman,A.
  TITLE     The PepSY domain: a regulator of peptidase activity in the
            microbial environment?
  JOURNAL   Trends Biochem Sci 29 (4), 169-172 (2004)
   PUBMED   15124630
REFERENCE   3  (residues 1 to 122)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015378.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03413.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..122
                     /product="PepSY domain-containing protein"
                     /calculated_mol_wt=13659
     Region          7..122
                     /region_name="COG5584"
                     /note="Uncharacterized conserved protein YtzB [Function
                     unknown]"
                     /db_xref="CDD:444323"
ORIGIN      
        1 mfeklcmkkk nlnlsdkeqi cagilfasgi aigasvtali yenqkrvdgd eiletvkkmf
       61 lvdgpiegsw ielhpvpltr fssetevyyg gisrkekend dlvqyefiad sytgtildiy
      121 kl
//
LOCUS       WP_235144909             320 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidylprolyl isomerase [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235144909
VERSION     WP_235144909.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025002.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13616.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..320
                     /product="peptidylprolyl isomerase"
                     /EC_number="5.2.1.8"
                     /calculated_mol_wt=34973
     Region          1..287
                     /region_name="prsA"
                     /note="peptidylprolyl isomerase; Provisional; PRK04405"
                     /db_xref="CDD:235295"
ORIGIN      
        1 mkkltlstvt lltavtlagc stsenvvtsa gnqtitkdef yeamkdsvge ttlqrmilin
       61 ifeneagtne fakeadaevt esmasvggee afkgfiqemg fasiedykqq illnkllpea
      121 iknrteitde dlaaayesye pqinaahilv ddedvakdli kqinegadfa elakenstdg
      181 saenggdlgf fgkgqmvpef eevaytldeg evtdtpvese ygyhiikmle kpekgtleee
      241 teqlkdiiiq ekiqdaaffn gklaeivkda dvkvndsdfk dimapflvee eaveaqdsat
      301 teteesatte stpeteesae
//
LOCUS       WP_235144959             537 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235144959
VERSION     WP_235144959.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 537)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..537
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=61455
     Region          5..533
                     /region_name="RocB"
                     /note="Arginine utilization protein RocB [Amino acid
                     transport and metabolism]; COG4187"
                     /db_xref="CDD:443341"
ORIGIN      
        1 msepkwqtkt qlqellsklv gwgsvtlseg erlfphrlre ellaldyfse hpdqislval
       61 sekrsslsal ylhpeatktv vvfghfdtvp iedfgeqqsl atqpelltaf fekniehapk
      121 evqediksge ylfgrgvmdm kmgvalnmqt lekaileqwk lnivflavcd eevnsegmra
      181 atphllalke kynldyqmgi ltepvfrndp rdnhftiytg tvgkvllgal vygkethage
      241 plsgitspyl asfltqemew neaflesdlg ekmqppvvlq qkdmllsysv qtplrtsilf
      301 nvfqmkrsia eiyslyeqta qtavekanhh yeekckqydi qpmgevrvir ydellryakn
      361 kmgeaaieri eadivqnsdw dvrekslria dslmmackel apavvlllap pyypavsfsg
      421 defieecnek lleiagevvh fpaqrvhyfn glcdmsytay qgdeseykvf eenapilgde
      481 ysipfkqmqe lnlptmvvgp ygkdphkyye rlnkknafee mpilferffh ylmdtak
//
LOCUS       WP_235145035             454 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235145035
VERSION     WP_235145035.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012371.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00144.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..454
                     /product="serine hydrolase"
                     /calculated_mol_wt=50636
     Region          59..423
                     /region_name="Transpeptidase"
                     /note="Penicillin binding protein transpeptidase domain;
                     cl21491"
                     /db_xref="CDD:473882"
ORIGIN      
        1 mklrmatgai lagavfltgc qttdqtdses qssiiensst essvmesqss eeqvadnqlk
       61 dgsaeeanmd eetlaeidqi veaameekii pgavvliakd nmivketayg yaqkydmgee
      121 lnepiemttd tifdlasvtk vmattqgimk lvsegeisvd dqvamylpdf skngkeevtv
      181 adllthtsgl tpweptylta knreevldyi ndlpleyetg tdrkysdfsf mtlafilesv
      241 tdkrldeylq deiygplqme dtlfnaadnt eqpiaatswg npyeykmied defgytveed
      301 pemfdgwrey tlvgeindgn gfyanegiag haglfstakd lavlgqtmln ggtyedvely
      361 sqevlqtfis pqrfeqgygw elnkewymgd qhsdqtfsht gftgtqvifd peynvqiiil
      421 tnkqnngqke dssyastgql sqdisnkvye sikk
//
LOCUS       WP_235145103             293 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein
            [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235145103
VERSION     WP_235145103.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 293)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..293
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=31926
     Region          51..277
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mifnkkkllg giavlssfml aacgnstdgn stegtdlsvs etqwdkieek gvwkvatsgt
       61 lfpssyhged neltgyeiev vkkiadrldv eiefmemgvd gmltavqsgq vdaaangfdi
      121 takreedylf adpykysfgg lvvrtsddsg iktmedwegk kaaggattty mtlakqlgae
      181 pvtydnatnd iffrdvaser tdfipndyyv sntavqkfad lgvkmsdlky npseqgivls
      241 kddssvkeki dpviaelnee gilaelskqf fggedvsqpl dnvddlpvie ike
//
LOCUS       WP_235144968             332 aa            linear   BCT 02-MAR-2025
DEFINITION  competence protein ComK [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235144968
VERSION     WP_235144968.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 332)
  AUTHORS   Nanamiya,H., Shiomi,E., Ogura,M., Tanaka,T., Asai,K. and
            Kawamura,F.
  TITLE     Involvement of ClpX protein in the post-transcriptional regulation
            of a competence specific transcription factor, ComK protein, of
            Bacillus subtilis
  JOURNAL   J Biochem 133 (3), 295-302 (2003)
   PUBMED   12761164
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018087.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06338.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..332
                     /product="competence protein ComK"
                     /GO_process="GO:0030420 - establishment of competence for
                     transformation [Evidence IEA]"
                     /calculated_mol_wt=39167
     Region          <172..230
                     /region_name="ComK"
                     /note="ComK protein; cl11560"
                     /db_xref="CDD:472221"
ORIGIN      
        1 mrndseaenq mekdspqlln kekqekltre kilipenega yyydsremmv hkiqesylns
       61 qgysetrhai ipfiirgred vqlyldaavy aeeipidsgl fciihipeyn isscfqtlaf
      121 yqdglilksn essnsvtnri fsklglkyeh mrnlisileg ktchcqpyiy gnacfmpvng
      181 pskqavswin lshligyekv pkenekiklf fdnrhtfnmh iryktfdknl rsavesyskq
      241 hhyyfkisha lgyevvkkqt fnpdsilnqq vvkyesnkya lpwvewfdhv qkfslktflk
      301 eqiikenpay ddikesfnqn yflikkkkrm hd
//
LOCUS       WP_235145146             228 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1361 domain-containing protein [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235145146
VERSION     WP_235145146.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018766.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07099.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..228
                     /product="DUF1361 domain-containing protein"
                     /calculated_mol_wt=27329
     Region          8..225
                     /region_name="DUF1361"
                     /note="Protein of unknown function (DUF1361); cl01784"
                     /db_xref="CDD:470341"
ORIGIN      
        1 mferykelll fmfgywalcv mtllltnkli yiglawnlfl aflplffiek aisasrqewa
       61 riwgilwfif fpnalypiss fihlsietfy wvegnypted vvygddifiw lklfmigigf
      121 fasiivglys lyifewmirm dyskrkgqkv vllvtfltgi avywgrflrl nswdiilrpw
      181 lllkeifsai nffmlefvfa ftiyavvsyg ifklfrkmmi hqqnrfen
//
LOCUS       WP_235145251             312 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235145251
VERSION     WP_235145251.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..312
                     /product="helicase-related protein"
                     /calculated_mol_wt=35869
     Region          <1..307
                     /region_name="ComFA"
                     /note="Superfamily II DNA/RNA helicase required for DNA
                     uptake (late competence protein) [Replication,
                     recombination and repair]; COG4098"
                     /db_xref="CDD:443274"
ORIGIN      
        1 mifqgiaetl vrkgrvcias pridvclela priqaafpei pqillygdsp dsyrytplvi
       61 atthqllrfr eafdlliide vdsfpyhnda mlhfgaeksr kkdgallylt atpprklldq
      121 vkdhsllati lparyhgypl peatciwlgd wrqdilmkrk rakflkiiek efslnrrfll
      181 flphiglmks leewlhivyp hkkftsvsaq dasrvekvkq mrneefdflm tttilergvt
      241 frdidvfvlg aedsvfteas lvqiagragr hkdfptgnvw yghfgytkam kkavqqikym
      301 nqearkrgll da
//
LOCUS       WP_235145255              70 aa            linear   BCT 02-MAR-2025
DEFINITION  Mur ligase domain-containing protein [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235145255
VERSION     WP_235145255.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 70)
  AUTHORS   Bertrand,J.A., Auger,G., Fanchon,E., Martin,L., Blanot,D., van
            Heijenoort,J. and Dideberg,O.
  TITLE     Crystal structure of UDP-N-acetylmuramoyl-L-alanine:D-glutamate
            ligase from Escherichia coli
  JOURNAL   EMBO J 16 (12), 3416-3425 (1997)
   PUBMED   9218784
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013396.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01225.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..70
                     /product="Mur ligase domain-containing protein"
                     /GO_function="GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=7581
     Region          27..>70
                     /region_name="MurE"
                     /note="UDP-N-acetylmuramyl tripeptide synthase [Cell
                     wall/membrane/envelope biogenesis]; COG0769"
                     /db_xref="CDD:440532"
ORIGIN      
        1 meakelfnsi kvknikgtlp dlsinkitqd trevetgdvf lciegsdfdg hlyakdavek
       61 gatvivaqkk
//
LOCUS       WP_235145305             297 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235145305
VERSION     WP_235145305.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 297)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 297)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..297
                     /product="VOC family protein"
                     /calculated_mol_wt=33468
     Region          7..128
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
     Region          141..295
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mepikrihhi saivgdpnen lkfyrdvlgl rlikqtvnfd dpgvyhlyfs nhqvtpgtvi
       61 tffpwtnnny gtkgsgqvgr iafripkgsf nywkehlasq nlkveitqlf gkdtlefddi
      121 hglelamveg eksadrpdii gfhgsvllse hpnatkkllv dsmglkeldy ndqnihvetv
      181 geekhhiits vppqpvgrfg igtvhhiaws vpdldalkew qnllfeenig atvvkdrnyf
      241 nsvysiekgk ivfefatdgp gftidedias lgttlqlpkq yeqnrptyet llpkldi
//
LOCUS       WP_235145145             374 aa            linear   BCT 02-MAR-2025
DEFINITION  DHHW family protein [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235145145
VERSION     WP_235145145.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 374)
  AUTHORS   Sychantha,D., Little,D.J., Chapman,R.N., Boons,G.J., Robinson,H.,
            Howell,P.L. and Clarke,A.J.
  TITLE     PatB1 is an O-acetyltransferase that decorates secondary cell wall
            polysaccharides
  JOURNAL   Nat Chem Biol 14 (1), 79-85 (2018)
   PUBMED   29083419
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025644.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14286.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..374
                     /product="DHHW family protein"
                     /calculated_mol_wt=43728
     Region          51..346
                     /region_name="AlgX_N_like"
                     /note="N-terminal catalytic domain of putative alginate
                     O-acetyltranferase and similar proteins; cl16774"
                     /db_xref="CDD:450039"
ORIGIN      
        1 mnykrksiyf iiifllfsll nllspvrsfs pkenrylqtf pdlnqkdffs gkfgrsievf
       61 lsdqfiqrdt wtgiktisdl allkkdngrv yfgkdgylfe vptafkekqf eknmnsiqaf
      121 ientsvdnhh isfqailvps kesvlsdklp fsapildeeh vlerihssls nsitfidllp
      181 vlkneesfyy rtdhhwtteg afvayqtyrn qldksllkee qfvkeevsnh fygtlyrkan
      241 fythlpdsif ryqpledwvy qitlneqtkl ssfyqesfle ktdqyayflg gnhavveiet
      301 tnkngqtigv ikdsfannfi pflslhyeki ividprhfgg nvqeylldqk vneilflfti
      361 qdfaqettlh klgi
//
LOCUS       WP_235144868             216 aa            linear   BCT 02-MAR-2025
DEFINITION  adaptor protein MecA [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235144868
VERSION     WP_235144868.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 216)
  AUTHORS   Nakano,M.M., Nakano,S. and Zuber,P.
  TITLE     Spx (YjbD), a negative effector of competence in Bacillus subtilis,
            enhances ClpC-MecA-ComK interaction
  JOURNAL   Mol Microbiol 44 (5), 1341-1349 (2002)
   PUBMED   12028382
REFERENCE   2  (residues 1 to 216)
  AUTHORS   Borezee,E., Msadek,T., Durant,L. and Berche,P.
  TITLE     Identification in Listeria monocytogenes of MecA, a homologue of
            the Bacillus subtilis competence regulatory protein
  JOURNAL   J Bacteriol 182 (20), 5931-5934 (2000)
   PUBMED   11004200
REFERENCE   3  (residues 1 to 216)
  AUTHORS   Kong,L., Siranosian,K.J., Grossman,A.D. and Dubnau,D.
  TITLE     Sequence and properties of mecA, a negative regulator of genetic
            competence in Bacillus subtilis
  JOURNAL   Mol Microbiol 9 (2), 365-373 (1993)
   PUBMED   8412687
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017226.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05389.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..216
                     /product="adaptor protein MecA"
                     /calculated_mol_wt=24930
     Region          1..216
                     /region_name="MecA"
                     /note="Negative regulator of genetic competence (MecA);
                     cl02022"
                     /db_xref="CDD:470438"
ORIGIN      
        1 memeninent irvliensdl eergitfldl lgnqkqienf fysileevdv ddqfhetdai
       61 tfqvlpngng lelfiskghg edldsfeged salehvidym kkqsqlsekd kklnkdendl
      121 gpleimlkfs dfeyflevsk rfflesglst lyyyeeayyl sivffidkmt etnleneiai
      181 alefaeesdi atevlgeygk vimkgnalet arhffk
//
LOCUS       WP_235145343             232 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF624 domain-containing protein [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235145343
VERSION     WP_235145343.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016726.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04854.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..232
                     /product="DUF624 domain-containing protein"
                     /calculated_mol_wt=26515
     Region          50..226
                     /region_name="DUF624"
                     /note="Protein of unknown function, DUF624; cl02369"
                     /db_xref="CDD:470552"
ORIGIN      
        1 mdfqyhamvv tkyiyaivrg ticfwlgnip yiflllnlfq aensdeigtl litglalipf
       61 ilapsitacl avtrkfliqe dssfplfrtf ittykkeykk sveigigfav ilglflfswq
      121 yytrilgtag niflvfsgll syiflmvlnl indqflsird yirnsfylti gypflsltgm
      181 ievalvfyit yllspsllil vtpgtilllt tylfrnlmkl erekqqinng kd
//
LOCUS       WP_235145345             310 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235145345
VERSION     WP_235145345.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 310)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..310
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=36321
     Region          18..284
                     /region_name="GH43_CtGH43-like"
                     /note="Glycosyl hydrolase family 43 protein such as
                     Clostridium thermocellum exo-beta-1,3-galactanase
                     (Ct1,3Gal43A or CtGH43); cd18822"
                     /db_xref="CDD:350143"
ORIGIN      
        1 mnklkngelw kdtegnpiha hgghilkkdn yyywygedrr dniyvscyrs kdlvnwefrn
       61 hilttdskme eyrvrtvckl inedgkkvnl erpkvlynks tntfvlwthy engndytdaa
      121 cavatcdtpd gdftyhghfn pfgymsrdct lyqdkddvay fisaardngd lhvyrlsedy
      181 lnidklvhrl wqgeyreapa vvekegvyyl lssfctgwyp nqgkyasskg ieedwsslqe
      241 fgdettyhsq psfilktydd qflyfgdrwn adhyfesgyv alplklegen vemsfydsvq
      301 lddtqvitfk
//
LOCUS       WP_235145441             357 aa            linear   BCT 02-MAR-2025
DEFINITION  type I phosphomannose isomerase catalytic subunit [Jeotgalibaca sp.
            MA1X17-3].
ACCESSION   WP_235145441
VERSION     WP_235145441.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 357)
  AUTHORS   Cleasby,A., Wonacott,A., Skarzynski,T., Hubbard,R.E., Davies,G.J.,
            Proudfoot,A.E., Bernard,A.R., Payton,M.A. and Wells,T.N.
  TITLE     The x-ray crystal structure of phosphomannose isomerase from
            Candida albicans at 1.7 angstrom resolution
  JOURNAL   Nat Struct Biol 3 (5), 470-479 (1996)
   PUBMED   8612079
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042587.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20511.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..357
                     /product="type I phosphomannose isomerase catalytic
                     subunit"
                     /GO_function="GO:0004476 - mannose-6-phosphate isomerase
                     activity [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=41048
     Region          1..338
                     /region_name="ManA"
                     /note="Mannose-6-phosphate isomerase, class I
                     [Carbohydrate transport and metabolism]; COG1482"
                     /db_xref="CDD:441091"
ORIGIN      
        1 mkilkfkdnr vrrnytggkg idelknrtpa kdseqpeewi astveannkg llevekegis
       61 hvvhhqsfie mierdpisyl gskhyeqygl nlgfliklld ssmrlhtqah ptrefakdfm
      121 nsdwgkfeay yilkirdsek gyirlgfqqa ptkeewkeii qsqdlekmdq cfeeipiqqg
      181 divyipggvp haigenvlmv eimepsdlvv rceferegiv vpegarfmgk dldfcldifd
      241 yeeysvedvq qkfflekekl leesnftvdr lvpasiarsf evfsvkiknk ktiqldekfy
      301 aglcvegaik ivsdqeelei qqgesffiss mtstievesl nnsyselcvv snvltke
//
LOCUS       WP_235145394            1610 aa            linear   BCT 02-MAR-2025
DEFINITION  bacterial Ig-like domain-containing protein [Jeotgalibaca sp.
            MA1X17-3].
ACCESSION   WP_235145394
VERSION     WP_235145394.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019161.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07523.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1610
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..1610
                     /product="bacterial Ig-like domain-containing protein"
                     /calculated_mol_wt=177377
     Region          479..543
                     /region_name="Big_3"
                     /note="Bacterial Ig-like domain (group 3); pfam07523"
                     /db_xref="CDD:400072"
     Region          557..626
                     /region_name="Big_3"
                     /note="Bacterial Ig-like domain (group 3); pfam07523"
                     /db_xref="CDD:400072"
     Region          639..705
                     /region_name="Big_3"
                     /note="Bacterial Ig-like domain (group 3); pfam07523"
                     /db_xref="CDD:400072"
     Region          718..771
                     /region_name="Big_3"
                     /note="Bacterial Ig-like domain (group 3); pfam07523"
                     /db_xref="CDD:400072"
ORIGIN      
        1 mtrkhfvkqs kiflstllll qpvlpltvla tetestdein teeiiseenv tdtiealmdd
       61 kegpitsiss nwngnifgdv ggqdkinsen feitenedgs vrmrssnnrg kissstdgia
      121 yyfqdipeda nfefsvtasv vsfdsnnqvs fgmmlrdevy edlhgteyan gnhlsigald
      181 ktlkafarqg talekielsq mfnmpengst yelkmkkmgs liileiddeq imiedytgei
      241 hyaglftsrn tevvysnisl eieeeiipei gdwqfsafgs ntssnknepp vfhedgsitm
      301 vatggkisss degisyyfdt lpaeanfevk akaivkqfnq tagistpnqk sfgimlrdev
      361 aehgdsmtss snyiavgald tvmkgfykqa dgqtkldaid ginmpstgee ydlsikklge
      421 vyvlnvngve etvsmdelfs gnvhaglfva rdaevtfqdf siqvdtrtis slevntdqmk
      481 ttylvnekld iegfnvtahy sdgtienvdv sdiiitgfns sqagenvitv hyggktrqvp
      541 itidaltvvd mnivylpart nyylgdqfee dglvveatyn ngetailere lykfeveeff
      601 tkagkqnvvi tstetpeaki sfsievhdas ltkleitqkp eitvyylgde idldglviya
      661 hysdgtkvrl mkgdfttsel dtttagnkti sfmykgkevq leltvkekem igitvtsypk
      721 ttytvgesfd keglvlakey dngdteelpe seyslevptl dkkgtyaiki hakdkyikpi
      781 elqvsvidpv tlewktirfg qssnqeknyv evqnngtikv valegggkit gdhdgisfyy
      841 teidakednf vlsanidvkn yakdphdgqe sfgimardai gnandssvfa sniaaiggfs
      901 gstrnpngiq lfartgvdtp dgagsqgikn imleeskptg mhrltlkktn sgyvgslnng
      961 eeeiifepei lqtqdsklyv gfytarlati evsdinftvt kaatdapkvn ppaiavepnv
     1021 titsldktpl ndyqlrflan vdgtvtvkks qevlkadlev lagnevnipv eiqkgftnfs
     1081 isflpedtqf ltsydkvvkn ftvenrtyqg dihvspegky gstgtiedpl sldtavefvl
     1141 pgqkiivhdg vylrsshlni ekyndgtkea mkyliaaeea npvldfdrkt egvilsgdyw
     1201 hikgidfrrs apntrgfivg gshnvieqan fyengdtglq isrtdqsani edwpshnlil
     1261 ncnsfdnrdp sdnnadgfaa kltsgvgnvf rgcmaynnid dgwdlytkag sgkigavlie
     1321 dsiafdngfv sydydgrgdg ngfklggegi hvphvirnsm afgnladgft snsnpgveay
     1381 dnisfnnlgr nlsfttyphi pvdftidgfv syqkdydgkd sypthliann nyffdgeksv
     1441 nqtgielsdk nfesleyipf erdkegniiw gpflafiape leepvgpekp ekpekpeepk
     1501 dpidpeapeg eevpdkgndl pseaegsekp getpseeqkp eeapsssddk neessengms
     1561 keedkeekek keehlpdtgi vtsfakiagt lllvggalal ffskrkevek
//
LOCUS       WP_235145443             230 aa            linear   BCT 02-MAR-2025
DEFINITION  ECF transporter S component [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235145443
VERSION     WP_235145443.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 230)
  AUTHORS   Iyer,L.M., Zhang,D., Rogozin,I.B. and Aravind,L.
  TITLE     Evolution of the deaminase fold and multiple origins of eukaryotic
            editing and mutagenic nucleic acid deaminases from bacterial toxin
            systems
  JOURNAL   Nucleic Acids Res 39 (22), 9473-9497 (2011)
   PUBMED   21890906
REFERENCE   2  (residues 1 to 230)
  AUTHORS   Rodionov,D.A., Hebbeln,P., Eudes,A., ter Beek,J., Rodionova,I.A.,
            Erkens,G.B., Slotboom,D.J., Gelfand,M.S., Osterman,A.L.,
            Hanson,A.D. and Eitinger,T.
  TITLE     A novel class of modular transporters for vitamins in prokaryotes
  JOURNAL   J Bacteriol 191 (1), 42-51 (2009)
   PUBMED   18931129
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024231.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12822.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..230
                     /product="ECF transporter S component"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /calculated_mol_wt=25798
     Region          52..223
                     /region_name="ECF-S"
                     /note="ECF-type riboflavin transporter, membrane (S)
                     component [Coenzyme transport and metabolism]; COG4720"
                     /db_xref="CDD:443755"
ORIGIN      
        1 marskqilig ittvifvgll afpmwiqqhy lafslllmaa sfvpfmirfs hqkltsrelv
       61 mlailgaias vsrvpfaslp svqpstfvvi vsgivlgpqs gfvigtltai vsnlflgqgp
      121 wtpwqmfawg migllaglfr nkwimknivg rciygfimgf ffgwlmnlwv ilglgltfsw
      181 evialyytss fffdlahals nvffillfsn swikilnrfk lkyglfstih
//
LOCUS       WP_235145553             368 aa            linear   BCT 02-MAR-2025
DEFINITION  GerMN domain-containing protein [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235145553
VERSION     WP_235145553.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 368)
  AUTHORS   Setlow,P.
  TITLE     Spore germination
  JOURNAL   Curr Opin Microbiol 6 (6), 550-556 (2003)
   PUBMED   14662349
REFERENCE   2  (residues 1 to 368)
  AUTHORS   Slynn,G.M., Sammons,R.L., Smith,D.A., Moir,A. and Corfe,B.M.
  TITLE     Molecular genetical and phenotypical analysis of the gerM spore
            germination gene of Bacillus subtilis 168
  JOURNAL   FEMS Microbiol Lett 121 (3), 315-320 (1994)
   PUBMED   7926687
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022112.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10646.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..368
                     /product="GerMN domain-containing protein"
                     /calculated_mol_wt=40874
     Region          206..352
                     /region_name="GerM"
                     /note="Spore germination protein GerM [Cell cycle control,
                     cell division, chromosome partitioning]; COG5401"
                     /db_xref="CDD:444160"
ORIGIN      
        1 mkkykivsgl alvtllatgc vntdpnsdss sstgslesse esslvssess iesssidene
       61 mtienyfpfd esvqysylge gnefapfdry pqyiegnriq yteknpgtth tfvleykdgk
      121 ltelfsrpet yfrenmlekt sdgageillk eplevgnnwe npsgvtseit svdfsvetpl
      181 gvfsaievtk tqedsvtksy ytknmglikq eftanddsyv vsstletrse eapevvvita
      241 yypdanamgl etsdvnvsfy tndvtrktma dllkqvpgve ygklisdnte inslylnedg
      301 rvyvdfskel vedmnagssg eslilqgivn tignyysvee vvltvenqpy esghysmmed
      361 esfrveme
//
LOCUS       WP_235145589             449 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235145589
VERSION     WP_235145589.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 449)
  AUTHORS   Urbach,C., Evrard,C., Pudzaitis,V., Fastrez,J., Soumillion,P. and
            Declercq,J.P.
  TITLE     Structure of PBP-A from Thermosynechococcus elongatus, a
            penicillin-binding protein closely related to class A
            beta-lactamases
  JOURNAL   J Mol Biol 386 (1), 109-120 (2009)
   PUBMED   19100272
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024748.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13354.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..449
                     /product="serine hydrolase"
                     /GO_function="GO:0008800 - beta-lactamase activity
                     [Evidence IEA]"
                     /GO_process="GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=49576
     Region          7..428
                     /region_name="strep_PBP3"
                     /note="streptococcal D-alanyl-D-alanine carboxypeptidase
                     PBP3; NF038273"
                     /db_xref="CDD:468443"
ORIGIN      
        1 meikmmkkwt iklltvglvv spfaaipeva aaeepievda kaafiiepet nkvlfsqnpd
       61 eslgiasmtk listyvilda ieqgelswdq kvtlsdyaqn isqdyelsnv pmrfdfdyti
      121 kdlyeamliy sgngaviama etlagseqkf vdrmiaqlde wgiedydiyn stglpnsyan
      181 efgqlypgap vdqenhmtar gvaivadhll ndypevlett kitektfmeg sgdeiqmsty
      241 nlmlpgepyy ragvdglktg ttdesgasft gtavegdmri itvliglenq enyaerfset
      301 krmmdyafkn yekvqiiekd svvesnptip iakgkqeeig lvysedltvv tkkaeertvd
      361 anlnlnselm nedglieapi ekgtevgkmt isiegddlgy ldgskgeevn vavaetveka
      421 niltigwrwv sgafvsgwtt vtefisgff
//
LOCUS       WP_235145603             181 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2975 domain-containing protein [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235145603
VERSION     WP_235145603.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022636.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11188.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..181
                     /product="DUF2975 domain-containing protein"
                     /calculated_mol_wt=19916
     Region          71..181
                     /region_name="DUF2975"
                     /note="Protein of unknown function (DUF2975); pfam11188"
                     /db_xref="CDD:463239"
ORIGIN      
        1 mnikkfrris rgsslllkif aifsitlviy glytilfgdg nfwftykgps iplfsmggss
       61 gsvgitdaee klasmiivpf tvvvfsfill kgsqiftwlg kgetpfsekf anaikrlslv
      121 liifdllvpi ifysvlslis vdgynytigf gsafiigiil fivseifkyg ielqsladet
      181 v
//
LOCUS       WP_235145612             223 aa            linear   BCT 02-MAR-2025
DEFINITION  general stress protein [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235145612
VERSION     WP_235145612.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 223)
  AUTHORS   Periago,P.M., van Schaik,W., Abee,T. and Wouters,J.A.
  TITLE     Identification of proteins involved in the heat stress response of
            Bacillus cereus ATCC 14579
  JOURNAL   Appl Environ Microbiol 68 (7), 3486-3495 (2002)
   PUBMED   12089032
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022629.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11181.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..223
                     /product="general stress protein"
                     /calculated_mol_wt=24978
     Region          9..>51
                     /region_name="YflT"
                     /note="Heat induced stress protein YflT domain; cl46343"
                     /db_xref="CDD:480683"
ORIGIN      
        1 mgkfvrgpft tidevkealn hlhnegyssk dvtvvanhkq dldalkssts adiskedgdh
       61 lndtenqsyw nelsdqfsgf ffnshltgtp dspivgyvpt pnrmadteml neqhvieded
      121 ptellatfkd dledgkivil vedtknidak fnldaiddyk dtlivedege vnadpsevmn
      181 etvterdshp didndeevle qettyvptds vddeetnrnh ptl
//
LOCUS       WP_235145646             434 aa            linear   BCT 02-MAR-2025
DEFINITION  colicin-like pore-forming protein, partial [Enterobacter
            hormaechei].
ACCESSION   WP_235145646
VERSION     WP_235145646.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 434)
  AUTHORS   Parker,M.W., Postma,J.P., Pattus,F., Tucker,A.D. and Tsernoglou,D.
  TITLE     Refined structure of the pore-forming domain of colicin A at 2.4 A
            resolution
  JOURNAL   J Mol Biol 224 (3), 639-657 (1992)
   PUBMED   1373773
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013211.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01024.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..>434
                     /product="colicin-like pore-forming protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0140911 - pore-forming activity [Evidence
                     IEA]"
                     /GO_process="GO:0019835 - cytolysis [Evidence IEA]"
                     /GO_process="GO:0031640 - killing of cells of another
                     organism [Evidence IEA]"
                     /GO_process="GO:0050829 - defense response to
                     Gram-negative bacterium [Evidence IEA]"
     Region          <126..238
                     /region_name="Surf_Exclu_PgrA"
                     /note="SEC10/PgrA surface exclusion domain; TIGR04320"
                     /db_xref="CDD:275124"
     Region          264..423
                     /region_name="Colicin"
                     /note="Colicin pore forming domain; pfam01024"
                     /db_xref="CDD:425995"
ORIGIN      
        1 mpgfnyggns vgdgtnwsse rgsdpttpgg gdnghagdhs ssgsssstve htpwgdlttd
       61 aagyaymngi kltadnsqla yvspthlvrv lnslldrsym kpepgehsgv tgvpatspsr
      121 vtladnalkn aqskaqdaaa alskanaais qaqtrlntak akipsleanv ntkqqasdka
      181 tarahelahf lndmggpgry nalnagyqse vaqseldnak kalanghsei taaqkaldda
      241 kkalpnatan kqkadsavas aadmkdaitt ttaffesisk kfgeraarla qelaaqarsa
      301 kirsvpeava lfdkhkgtav nklnaadkaa ianafksldq aamakqlaay skvlghfnka
      361 mdfadlgaav kkgietgnwn dainklesia ltntagqlaa iafaaagapl givgfgivmt
      421 lsgvlfsnek vlsa
//
LOCUS       WP_235145712             491 aa            linear   BCT 02-MAR-2025
DEFINITION  family 1 glycosylhydrolase [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235145712
VERSION     WP_235145712.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012457.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00232.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..491
                     /product="family 1 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=56435
     Region          1..490
                     /region_name="Glycosyl hydrolases"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     cl23725"
                     /db_xref="CDD:474034"
ORIGIN      
        1 mnefpngflw ggataanqce gawniggrgl tkadvitggs kseerkityi dkdgnpgvla
       61 nkrssipkga thavldgyyy pshesvdfyh rykedialla emgfkvfrls iswtrifpng
      121 deetankegl dfyhkvfeec kkygieplvt lshfdtpiyl eenyggwnnr klitlyerya
      181 etcfkeykgl vkywitfnei nhplmiaelf kenkskdvyq svyqqlhhkf vasaravkka
      241 haidientvg cmisgitfyp gtpdpddill nqykweniiy ycgdvqcrge ypsfakrlwd
      301 lhhvqleite qdkkdlkegc vdiytfsyym stivtthpne dvvsgnyssg vrnpyltysq
      361 wgwaldpkgl ryyiekiydr ykiplmiten glgamdhvea dgsihdtyri dylrehikei
      421 kvainhgadv igytswgcid lissstgems krygfiyvdr dnqgrgtlnr srkdsfywyq
      481 kviqsngsnl l
//
LOCUS       WP_235145730             489 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235145730
VERSION     WP_235145730.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 489)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024091.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12679.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..489
                     /product="ABC transporter permease subunit"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=53485
     Region          14..>148
                     /region_name="NosY"
                     /note="ABC-type transport system involved in multi-copper
                     enzyme maturation, permease component [Posttranslational
                     modification, protein turnover, chaperones]; COG1277"
                     /db_xref="CDD:440888"
ORIGIN      
        1 mfskpifkqs iqanwklwai itivastils gfimnydaag yasiaaaakg tafsnflssm
       61 tsllgslenf ykliavilgi vyvvftannl vvnevdsgsm aytlstpikr ssviftksly
      121 lilsvvlmym iislsglgas qlqynnvtgy aitddikaas etlnqkeryl serlyliqdd
      181 dqamreaaaa rdmdtdaysi ylrnvidtns yekaaniitd ergdtyendd dmededieit
      241 tkelienptm ilasndalva garvqgisvn eyrqlimdei emleaegkdt eeqesqlevv
      301 vtennterll ktviessama lnissdqing nltliknsta lkasieatgl tekqiitman
      361 qamvsaarsv dtalefdiet yfwlslgllt lilvmssisf ftstlfnrtg lslaigggip
      421 fafflitmiq qlmedstsal eyltitslfd tdailaggef gwglaalgii aivlytasnv
      481 ifikkdlpl
//
LOCUS       WP_235145741             303 aa            linear   BCT 02-MAR-2025
DEFINITION  SMR family transporter [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235145741
VERSION     WP_235145741.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 303)
  AUTHORS   Yerushalmi,H., Lebendiker,M. and Schuldiner,S.
  TITLE     EmrE, an Escherichia coli 12-kDa multidrug transporter, exchanges
            toxic cations and H+ and is soluble in organic solvents
  JOURNAL   J Biol Chem 270 (12), 6856-6863 (1995)
   PUBMED   7896833
REFERENCE   2  (residues 1 to 303)
  AUTHORS   Parent,R. and Roy,P.H.
  TITLE     The chloramphenicol acetyltransferase gene of Tn2424: a new breed
            of cat
  JOURNAL   J Bacteriol 174 (9), 2891-2897 (1992)
   PUBMED   1314803
REFERENCE   3  (residues 1 to 303)
  AUTHORS   Sasatsu,M., Shima,K., Shibata,Y. and Kono,M.
  TITLE     Nucleotide sequence of a gene that encodes resistance to ethidium
            bromide from a transferable plasmid in Staphylococcus aureus
  JOURNAL   Nucleic Acids Res 17 (23), 10103 (1989)
   PUBMED   2602117
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013089.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00893.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..303
                     /product="SMR family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /calculated_mol_wt=33940
     Region          <66..160
                     /region_name="TMEM234"
                     /note="Putative transmembrane family 234; cl46810"
                     /db_xref="CDD:481150"
     Region          <203..303
                     /region_name="TMEM234"
                     /note="Putative transmembrane family 234; cl46810"
                     /db_xref="CDD:481150"
ORIGIN      
        1 mfyltlaiic sasialifky tensnanrmv itsanyfiaf sislfmifyk gllsnfsrei
       61 sfakdfslls tnpehilsps ssiiwglivg gifgsfffls ftyyqksike ngvgisgtia
      121 klgilipmif siviwkefps viqwigiils lvsilivnls qkslekfdvk ptiiflfvfg
      181 gmaefsskiy qkyalndykd vflfaiffta flvsifytvk ekrkitkkdi ltgfvvgipn
      241 lfssyflils latlktsvvf piysaasivl iniggyflfk ekitrknqva ivltvlalil
      301 inl
//
LOCUS       WP_235145753             397 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-dependent oxidoreductase [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235145753
VERSION     WP_235145753.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 397)
  AUTHORS   van Der Ploeg,J.R., Iwanicka-Nowicka,R., Bykowski,T.,
            Hryniewicz,M.M. and Leisinger,T.
  TITLE     The Escherichia coli ssuEADCB gene cluster is required for the
            utilization of sulfur from aliphatic sulfonates and is regulated by
            the transcriptional activator Cbl
  JOURNAL   J Biol Chem 274 (41), 29358-29365 (1999)
   PUBMED   10506196
REFERENCE   2  (residues 1 to 397)
  AUTHORS   Kertesz,M.A., Schmidt-Larbig,K. and Wuest,T.
  TITLE     A novel reduced flavin mononucleotide-dependent methanesulfonate
            sulfonatase encoded by the sulfur-regulated msu operon of
            Pseudomonas aeruginosa
  JOURNAL   J Bacteriol 181 (5), 1464-1473 (1999)
   PUBMED   10049377
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015325.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03358.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..397
                     /product="NAD(P)H-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=44158
     Region          1..163
                     /region_name="SsuE"
                     /note="NAD(P)H-dependent FMN reductase [Energy production
                     and conversion]; COG0431"
                     /db_xref="CDD:440200"
     Region          244..354
                     /region_name="PAS_10"
                     /note="PAS domain; pfam13596"
                     /db_xref="CDD:404482"
ORIGIN      
        1 mkivgivgsn aelsynrkll qfiekqfgsm fdfevieikd iplfnqsndq tnsapiqnih
       61 rkilnadgvi iatpehnhti paalksvlew lsfnihslde kpvmivgasy ydqgssraql
      121 hlrqildapg vnamvmpgne fllgkvkeaf dekdrlkdqg tidflktcle kfvkfinvvt
      181 vleapkkeaa kpedlhatgk vdttiegvdm eaddwleqaa elvdavegnt yvkldrgllt
      241 vdqlnyflss mpmeltyads nnqflyynht kpmeemlagr tpgqvgnpla kchpeksfkg
      301 vewvlqqlrs gamdsvrvnv pthgpdkfvv hnyqamhdpe gnyvgvneyi ldfkpivdwy
      361 leqtgmkleg nvdavssasv kdegetvdav sgasesy
//
LOCUS       WP_235145762             261 aa            linear   BCT 02-MAR-2025
DEFINITION  aspartate dehydrogenase domain-containing protein [Jeotgalibaca sp.
            MA1X17-3].
ACCESSION   WP_235145762
VERSION     WP_235145762.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 261)
  AUTHORS   Yang,Z., Savchenko,A., Yakunin,A., Zhang,R., Edwards,A.,
            Arrowsmith,C. and Tong,L.
  TITLE     Aspartate dehydrogenase, a novel enzyme identified from structural
            and functional studies of TM1643
  JOURNAL   J Biol Chem 278 (10), 8804-8808 (2003)
   PUBMED   12496312
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014063.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01958.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..261
                     /product="aspartate dehydrogenase domain-containing
                     protein"
                     /GO_function="GO:0033735 - aspartate dehydrogenase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=28777
     Region          4..261
                     /region_name="AspD"
                     /note="L-aspartate dehydrogenase, NAD(P)-dependent [Amino
                     acid transport and metabolism]; COG1712"
                     /db_xref="CDD:441318"
ORIGIN      
        1 mkkkklallg ygylnqhvah avksgilegy elvgvlgrnp ektqviashy nckpcstiee
       61 lmnlepdfvv eaasrtalld ygktvlkgga nlvilsasil sdleffqslk etaqennsri
      121 ylpggavggf dlirtaalmg pvdvtmtskk vpqhlyhspf frnellhite tetvfegsit
      181 klmqefpyiy nvamasalat vgpdhihfki havpnfrgde yhihvkgqev eidlniftin
      241 yniaawsvvt ilrnavstvv f
//
LOCUS       WP_235145870             197 aa            linear   BCT 02-MAR-2025
DEFINITION  5' nucleotidase, NT5C type [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235145870
VERSION     WP_235145870.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 197)
  AUTHORS   Rampazzo,C., Kost-Alimova,M., Ruzzenente,B., Dumanski,J.P. and
            Bianchi,V.
  TITLE     Mouse cytosolic and mitochondrial deoxyribonucleotidases: cDNA
            cloning of the mitochondrial enzyme, gene structures, chromosomal
            mapping and comparison with the human orthologs
  JOURNAL   Gene 294 (1-2), 109-117 (2002)
   PUBMED   12234672
REFERENCE   2  (residues 1 to 197)
  AUTHORS   Rampazzo,C., Johansson,M., Gallinaro,L., Ferraro,P., Hellman,U.,
            Karlsson,A., Reichard,P. and Bianchi,V.
  TITLE     Mammalian 5'(3')-deoxyribonucleotidase, cDNA cloning, and
            overexpression of the enzyme in Escherichia coli and mammalian
            cells
  JOURNAL   J Biol Chem 275 (8), 5409-5415 (2000)
   PUBMED   10681516
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018627.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06941.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..197
                     /product="5' nucleotidase, NT5C type"
                     /GO_function="GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009264 - deoxyribonucleotide catabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=22980
     Region          3..173
                     /region_name="YorC"
                     /note="5'(3')-deoxyribonucleotidase [Nucleotide transport
                     and metabolism]; COG4502"
                     /db_xref="CDD:443586"
ORIGIN      
        1 mgkkisiaid mddvladttg klitvynhlf nenyisedfv gvdtdalfpk ealhelhkef
       61 nkpgftrdlt vkshapkvve elnerydvyi ataamevpgt fkdkydwlke hfpflnenyf
      121 ifcgnkkvvq adyliddnfq qlkqfqgtgi lytatvnkgk dipfirmdnw ldvhhhfvds
      181 yqdrmieaee rrfktfh
//
LOCUS       WP_235145701             571 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF927 domain-containing protein [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235145701
VERSION     WP_235145701.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 571)
  AUTHORS   Mir-Sanchis,I., Roman,C.A., Misiura,A., Pigli,Y.Z., Boyle-Vavra,S.
            and Rice,P.A.
  TITLE     Staphylococcal SCCmec elements encode an active MCM-like helicase
            and thus may be replicative
  JOURNAL   Nat Struct Mol Biol 23 (10), 891-898 (2016)
   PUBMED   27571176
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017826.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06048.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..571
                     /product="DUF927 domain-containing protein"
                     /calculated_mol_wt=64298
     Region          80..>410
                     /region_name="COG5519"
                     /note="Predicted ATPase domain of Cch-like helicases,
                     DUF927 family [General function prediction only]"
                     /db_xref="CDD:444270"
     Region          434..530
                     /region_name="HTH_56"
                     /note="Cch helix turn helix domain; pfam18662"
                     /db_xref="CDD:436653"
ORIGIN      
        1 msentiqidh fifsfkdgiq mrtseginti amyaritrvf intntneqsf eltfrhkilk
       61 dihvipisyk slqpnsivsl mrfgldatnm nrnhlcnali tslseakvvy vnhnygfdtf
      121 dnqpifvtnr fhssfpikee ihinhdrydl kpsgqldewl hmfetyvegr telelatmig
      181 lsspilaylk rshvdlkslm ihlsgdstsg ktsalslavs vagspnsgek sllrhwngtl
      241 tsvmasledi hgipiafdel stntnanlts liysltegvg rsranidgsl kevgswstvi
      301 lssgelsiyn rlshnvglrv rvfdfenvsw tesaeqaeai kqvtannygh llpafmdylf
      361 evglsvidsc yenqveqllt llpdsrtkqr vasklavila tadlanqsgl vsvniekmtq
      421 mlveyernhl sernlgeval dklmqhlivn qrsltkfghn tlgylegktv ciyreqlgat
      481 lkqlgfedsq iivkrwihsk viilsekdrn ttrkliqgkr misyklqipe iyvreglcek
      541 pgpptspnen lineklakyt sqsplfddif k
//
LOCUS       WP_235146015             986 aa            linear   BCT 02-MAR-2025
DEFINITION  SIR2 family protein [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235146015
VERSION     WP_235146015.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024685.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13289.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..986
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..986
                     /product="SIR2 family protein"
                     /calculated_mol_wt=115986
     Region          17..249
                     /region_name="SIR2"
                     /note="SIR2 superfamily of proteins includes silent
                     information regulator 2 (Sir2) enzymes which catalyze
                     NAD+-dependent protein/histone deacetylation, where the
                     acetyl group from the lysine epsilon-amino group is
                     transferred to the ADP-ribose moiety of NAD+; cl00195"
                     /db_xref="CDD:444738"
ORIGIN      
        1 mkmkqyidei nkasrqgklv ffvgagvstl sgyprwaelv dvfykrlygk eregvltsdd
       61 ylripqifyd vleehekdqy dkilkeifdv qkkpnsvhyk ilslnpahii ttnyddllek
      121 tcwqrgkyyt kisaekdvsg atssrylvkv hgdfsrgfna dnvvlkesdy msydqnypli
      181 snlmktimat htivfigygl gdyninllln wvkqlqkdgy nkpffirtdq epikdsdaky
      241 fknkglriid saslikskgd eylkrynavm dvlvdyrnnt vsledseiie llykkvqplf
      301 alksirktdl kyvfdndyff nvdgsiisns stgegymerf yniqiksneg inedtrekyn
      361 aileffsknn ilgmaneiet ksisiinsvt npifhanfde vdqsidsdkd gaefhykkaf
      421 ylaclgewee syklyskiis rtiesnnlwi yylsqinryh lyqsikqtkr hmdtigilty
      481 gvhyqpfsqq fieqieselk nfnlndlfls mpnefqddyr ileflgdskf lyddtvklfe
      541 ltnkvrnain kgsvsfglts eneimlrvye tirflfdnhl wstsfgefkk yvksaiilqf
      601 ekaeydltrd vdnfgflemi nrsgfyidyf dfiiiaktfn vddikyiera cdisrisfke
      661 vdkieeyllr lvremedhyt edtlrmnilf ynffineiks avyfakyvsl spqcitklik
      721 aiiylipnre ldngqkylwc erltrnnslp eeaiqliesf llkearnrid idysemtsnn
      781 lfshnfalli hqyypnyvse nlskyaiain kestkeidyl yklskiltpe srkylfdnkn
      841 isnikdvidc lrandinsit eydsivvsyv sdriseiksn tekgvtvltt gdylvelasq
      901 ffmgelknke leeykgvvde ydmfidpdgf dyakfdpvwl krysddllmk isenkymrnn
      961 ilkilkerii nskdhtylsm llkhfv
//
LOCUS       WP_235146020            1855 aa            linear   BCT 02-MAR-2025
DEFINITION  polysaccharide lyase family 7 protein [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235146020
VERSION     WP_235146020.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020367.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08787.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1855
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..1855
                     /product="polysaccharide lyase family 7 protein"
                     /calculated_mol_wt=206363
     Region          44..145
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
     Region          217..>388
                     /region_name="Pectate_lyase_3"
                     /note="Pectate lyase superfamily protein; pfam12708"
                     /db_xref="CDD:403800"
     Region          <402..628
                     /region_name="NosD"
                     /note="Nitrous oxide reductase accessory protein NosD,
                     contains tandem CASH domains [Inorganic ion transport and
                     metabolism]; COG3420"
                     /db_xref="CDD:442646"
     Region          652..863
                     /region_name="Alginate_lyase2"
                     /note="Alginate lyase; pfam08787"
                     /db_xref="CDD:400923"
     Region          <1752..1855
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          1813..1854
                     /region_name="Gram_pos_anchor"
                     /note="LPXTG cell wall anchor motif; pfam00746"
                     /db_xref="CDD:366278"
ORIGIN      
        1 mrqkigrvll vlmlmlssfn faalvhgeen kkrydivdvw asgddgnvie ntldnisstr
       61 waskadkepq wavydlgeek nvakvgisfn ngdvrrtifd ievsndkkew vklldqtstp
      121 eekatndlvg fdvkdttary vrftgygyef ydeskgsgdw isifdfhiyg ndsdpldptl
      181 nieqeqrsal tytqpglvna dgsdhaepva nvatttidvt kngvdtsend qstaiqklid
      241 eaevgtelyf pngtytivey lkmkdgvnlr gesregtifm atpsdsgynd mlilmlgved
      301 vvisditita dlvvdyevdh tvnnpnadgl kvpirirdre gyldldtgiq lnkpsknili
      361 knvliekyqt mgirvenssd vvidaaifqn amdlggvgag ygvsiqgagn nrdrtgfsnd
      421 skhnvvknsq figpylrhgv ilqyythnna iynnvltetk ldaidihged eylneiygnt
      481 ikdiktgagi aagntgathd ksgpgnyihd ntisnsregi kihlgtedti ienntiigst
      541 vpnakgiylq napgtrvtgn tikdnqsagf ysvymdydng taatgqqarg fgipydiiie
      601 dntfdnntng vyissgrkie ydnntftnis dqkivdtrtk dykesmlpte ildltnwkin
      661 tarydesgtk pvevkqpele effdedfyyv naeqtgvvfn apvdgattpn snyprtelre
      721 mknggtehad wstaegkhtm vidqmvtslp avknevtvgq ihdadddvvm irleaerlfv
      781 qaegvdlgtl esnyqlgtrf qvkieamnni vyvyyngelk veypvekhgn yfkagmytqs
      841 nlskgdikga ygevvifgvt lehdydnvpt epekeielpe tdptgtinav mdtfieltee
      901 edtdgvkqpv ansepknssn qlelktsgsq kyirmpiiqf nvanydkdva saelvlskks
      961 ldkqdttisv yattevlped itwanteglg vdsrinkgnt dvldwlksiq aekvgemefa
     1021 ldenimehkm nvskfvnkdl eeenitfill deagvntylk lysmeeeyap tlniwdtvgg
     1081 sdedeseegn lgvadeevda tqdtyielss kvgnsetyna kktldlktsg gqttirmpii
     1141 efdlmnsesi kagklglsla sldqdisvav yatnqslpad itwesiegln ndsrvtenkg
     1201 ntdvldwits vggtkvgnid flaagateyt ldasevlnee fngdqvtfil ideeasngyl
     1261 klnsiesgns aklsiwnadp seepgegtpe aknytltfkv kdendtynef htadyegsee
     1321 aalehgegla akfadkygey tyeavdngfv fnfegleiev pevevytltf kvkdedgvyn
     1381 efhttdyesn eetaleyges latefvalyg eytykaveng fvfnfeglei etpevelytl
     1441 tfkvkdesdv ynefyvvnye gneetaldyg eklavkfaei ygdyiyetad ngfvfnfeal
     1501 enqvpeveys tltfrvkdkn giynefyvvd yeakeetala ygeklavlfa etngeymyee
     1561 vengyvfnfe glevekytlt fkvkdenedy nefytaiyeg seeaaleyge slailfaevn
     1621 gdynyerven gyifnfegle ieipeveiyt ltfkvknkdg iynefyvfdy egsvekaley
     1681 getladlfae tngkytsekv engyvfnfeg qsaeiplipl epsipvdped dvdpdgdtdp
     1741 edetdadadd esnigggadi ddesniggga daddksntgg eadlddesdt nassnkkpes
     1801 sekpgkiedk ekpsnskees lpetgtkrni ysllgmmvlv igaaivvynk ksske
//
LOCUS       WP_235146126             602 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Jeotgalibaca sp.
            MA1X17-3].
ACCESSION   WP_235146126
VERSION     WP_235146126.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..602
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=66542
     Region          <40..174
                     /region_name="DdpA"
                     /note="ABC-type transport system, periplasmic component
                     [Amino acid transport and metabolism]; COG0747"
                     /db_xref="CDD:440510"
     Region          218..>590
                     /region_name="DdpA"
                     /note="ABC-type transport system, periplasmic component
                     [Amino acid transport and metabolism]; COG0747"
                     /db_xref="CDD:440510"
ORIGIN      
        1 mlpfitaaaa lvlgacsvqt edqannpgtd atqspettek vsieilgmsa netdmnivrd
       61 qlikngfdve lntqpdyasf tsqqdagnfd lavtgwttvt gnpdyavrsl fstggdyssm
      121 snddvdrlin eaalqtpedy vetykeledv lvtenayivp lfnslkaqaf nkellnpeti
      181 rlsksrafaw epvsfideam ndtetvmytq tisdltsldp ikandgsinq lntnmyvrlv
      241 nladddqvvs egslsynhai aegneeyyfv lrddinfakv endeavdtge mvsgqdvifs
      301 lnrakdpnsv pdhrtfslhe hineislvtd vseletlels ngsgnvldal ekdldnpiqt
      361 lvedteevdn aagnyqvvkl tttepfpqvl nylghqsagi vsqkqvesvn tydmdsfdln
      421 ndipygdqra vteggtydnh lyasgpyiml kkndyettfq knpgymtnge haaniknvtv
      481 rfisdadsal salradeihl lyglnetkyd iveessnlel qnipsnavty mifntegrev
      541 sdsadlrksi lysinqdein aaydgnklka ystlsplvdt gnelvadpqk veefynayle
      601 sk
//
LOCUS       WP_235146038             518 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Jeotgalibaca sp.
            MA1X17-3].
ACCESSION   WP_235146038
VERSION     WP_235146038.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 518)
  AUTHORS   Kreikemeyer,B., Beckert,S., Braun-Kiewnick,A. and Podbielski,A.
  TITLE     Group A streptococcal RofA-type global regulators exhibit a
            strain-specific genomic presence and regulation pattern
  JOURNAL   Microbiology (Reading) 148 (Pt 5), 1501-1511 (2002)
   PUBMED   11988525
REFERENCE   2  (residues 1 to 518)
  AUTHORS   McIver,K.S. and Myles,R.L.
  TITLE     Two DNA-binding domains of Mga are required for virulence gene
            activation in the group A streptococcus
  JOURNAL   Mol Microbiol 43 (6), 1591-1601 (2002)
   PUBMED   11952907
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016901.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05043.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..518
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=61396
     Region          15..>515
                     /region_name="BglG"
                     /note="Transcriptional antiterminator [Transcription];
                     COG3711"
                     /db_xref="CDD:442925"
ORIGIN      
        1 mwdlvpsnel rkykildaiy ysndwmtist lakktssser sikydlkele nyieylngev
       61 itsskgirlt lppnigidyf qrnlyknipa fklleyiffn keisdheaee llfisssslk
      121 rlvvkvkdal apyglvlstn pfqihgderl irsffsayfn erysleewsf pnihlllida
      181 lndylhhyfk tssdnvdyhf lkiqlavnit rerqsfptil pysiifehrn llyketvsei
      241 trmmqpfnls lqesqaylnq lmnwkfyfst fflddptpey eltleyksmq telkqikkmi
      301 eklssifslp kadhihliyk lnnvitnyll fpstiigndy ilfnptdffl nrkfkeeypv
      361 fyslvqqnil nickkrglsl krgqlielty tllsnwehli pnmysifdrl kilvfshyhs
      421 ihafnistel sselndsiti eiykestlnq yslkdytfdi lfstrtllfd ikqpviylkr
      481 vngkldiqhf niiisetike nkkplkkrkk qlsiksfl
//
LOCUS       WP_235146240             350 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Jeotgalibaca sp.
            MA1X17-3].
ACCESSION   WP_235146240
VERSION     WP_235146240.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 350)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 350)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 350)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 350)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..350
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=40252
     Region          1..111
                     /region_name="YhcF"
                     /note="DNA-binding transcriptional regulator YhcF, GntR
                     family [Transcription]; COG1725"
                     /db_xref="CDD:441331"
     Region          123..334
                     /region_name="CcmA"
                     /note="ABC-type multidrug transport system, ATPase
                     component [Defense mechanisms]; COG1131"
                     /db_xref="CDD:440746"
ORIGIN      
        1 mefnrrspvy eqiityfker iangeykpgs dvpsrrelav lfkinpntaq raykemeeqg
       61 liytegnsps ritedrstiq mlrkdmihta lddfiavikp mgleiqdiip llqkkygeek
      121 kmielrdvhk sfknknvlkg isfsikpnev tcitglngtg kttlmnsimq lnpidkgeil
      181 ldgkklthqs fekisyipdt lkmpgnmniq eamnfmeiyy qnwnkdkate lisffklnpd
      241 eklkdyskgn qakinfllgl sldadyflmd eplsgvdmfa reqilevfts nlitnkgvll
      301 athhieevef lldrvvmlqm gaiqkdfyae eiretegksi idvmrevyqs
//
LOCUS       WP_235146495             670 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235146495
VERSION     WP_235146495.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 670)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..670
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=74626
     Region          30..>153
                     /region_name="FrsA"
                     /note="Fermentation-respiration switch esterase FrsA,
                     DUF1100 family [Signal transduction mechanisms]; COG1073"
                     /db_xref="CDD:440691"
ORIGIN      
        1 mkrrtlvlli tslllifvgs fiasmsnsss gdvdisrisf etdngelsgl lylpegakde
       61 prptivathg ylnsaemqaa qaiemskrgy vvlaldlydh ghsvgemdks ipffsfwlta
      121 mydavnymye qdfvlkdenn ngviavsghs mggfssthav lldekfyeqs gfrkissslt
      181 mgsdysniyv lgyelndivn aygprtsgai agkydefffs peaaalgktv vekdyistke
      241 aqsflgnpen psvgefykas ggkrviyqpk ethpwnhfsm nttdhvidfy desfseysdi
      301 ikvgnanqsw mykewfsfla ligfflmfvp vvkillkvpf lskaivdrpk slpvpntnse
      361 ktsnlimiif gsfmpallft tfysgvevgl rlmtqinyii iaislitlvf ayfkdkhsdi
      421 kkvsiavlit siaqfiliky rgtlievsdf lgaptgntia ywainialit lmvlivnyfi
      481 yqkpkgvtie nyglkvnvkt vlaslavaai aiavsylmlf ivdalfktdf rlwtlavktf
      541 ethhlvallk yaplffvfyf ivglsinsnt aderfdgikg ylvsifmfvg glifyliyqy
      601 gslfvmgqaa fpsealssiv viglvpvlii aaifnryfyr ltgnvylgtf invflmtlvl
      661 lantalyatl
//
LOCUS       WP_235146499             182 aa            linear   BCT 02-MAR-2025
DEFINITION  TetR/AcrR family transcriptional regulator C-terminal
            domain-containing protein [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235146499
VERSION     WP_235146499.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 182)
  AUTHORS   Ramos,J.L., Martinez-Bueno,M., Molina-Henares,A.J., Teran,W.,
            Watanabe,K., Zhang,X., Gallegos,M.T., Brennan,R. and Tobes,R.
  TITLE     The TetR family of transcriptional repressors
  JOURNAL   Microbiol Mol Biol Rev 69 (2), 326-356 (2005)
   PUBMED   15944459
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025636.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14278.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..182
                     /product="TetR/AcrR family transcriptional regulator
                     C-terminal domain-containing protein"
                     /calculated_mol_wt=21848
     Region          6..176
                     /region_name="DHAK_reg"
                     /note="probable dihydroxyacetone kinase regulator;
                     TIGR02366"
                     /db_xref="CDD:274100"
ORIGIN      
        1 miqnnitkei iscsfkqltn ekaidkisit dimnqtdyrr qtfyhhfndk ydlvtwifsc
       61 evselidlis nweqrenvll fllqyleenk iyykkiflni kldsfkdyfv yyikqevkki
      121 tndylktltv cdithtsvva ttdfytygls emlyrwvled cnpnannyhk lliqaipykf
      181 qs
//
LOCUS       WP_235146501              37 aa            linear   BCT 02-MAR-2025
DEFINITION  IS3 family transposase [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235146501
VERSION     WP_235146501.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024729.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13333.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..37
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..37
                     /product="IS3 family transposase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=4633
     Region          <4..30
                     /region_name="transpos_IS3"
                     /note="IS3 family transposase; NF033516"
                     /db_xref="CDD:468052"
ORIGIN      
        1 mwyaieeyie fynhrsyqkk lkkmtpiayr dhllwvv
//
LOCUS       WP_235146534             337 aa            linear   BCT 02-MAR-2025
DEFINITION  type VII secretion protein EssB/YukC [Jeotgalibaca sp. MA1X17-3].
ACCESSION   WP_235146534
VERSION     WP_235146534.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalibaca sp. MA1X17-3
  ORGANISM  Jeotgalibaca sp. MA1X17-3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Jeotgalibaca.
REFERENCE   1  (residues 1 to 337)
  AUTHORS   Sutcliffe,I.C.
  TITLE     New insights into the distribution of WXG100 protein secretion
            systems
  JOURNAL   Antonie Van Leeuwenhoek 99 (2), 127-131 (2011)
   PUBMED   20852931
REFERENCE   2  (residues 1 to 337)
  AUTHORS   Desvaux,M., Hebraud,M., Talon,R. and Henderson,I.R.
  TITLE     Outer membrane translocation: numerical protein secretion
            nomenclature in question in mycobacteria
  JOURNAL   Trends Microbiol 17 (8), 338-340 (2009)
   PUBMED   19674902
REFERENCE   3  (residues 1 to 337)
  AUTHORS   Desvaux,M., Hebraud,M., Talon,R. and Henderson,I.R.
  TITLE     Secretion and subcellular localizations of bacterial proteins: a
            semantic awareness issue
  JOURNAL   Trends Microbiol 17 (4), 139-145 (2009)
   PUBMED   19299134
REFERENCE   4  (residues 1 to 337)
  AUTHORS   Burts,M.L., Williams,W.A., DeBord,K. and Missiakas,D.M.
  TITLE     EsxA and EsxB are secreted by an ESAT-6-like system that is
            required for the pathogenesis of Staphylococcus aureus infections
  JOURNAL   Proc Natl Acad Sci U S A 102 (4), 1169-1174 (2005)
   PUBMED   15657139
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021643.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10140.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Jeotgalibaca sp. MA1X17-3"
                     /db_xref="taxon:2908211"
     Protein         1..337
                     /product="type VII secretion protein EssB/YukC"
                     /calculated_mol_wt=39175
     Region          41..>319
                     /region_name="YukC"
                     /note="WXG100 protein secretion system (Wss), protein
                     YukC; cl01868"
                     /db_xref="CDD:470378"
ORIGIN      
        1 mkknfkvyaf efgtvieeen qvkiemehsl ftpdiekert nlptkedplf lklgnvqese
       61 asfsflyeks sqlknltqik teaypvklsi aqeileqdiq dqytrsdlyi slnpstiyyh
      121 pmqtirytyv anrfmpkdth tsmeryrali vsllsdlpye kclnspkdvr kegnelikel
      181 yqqptvpdll alikqsndfi tygyienrkk senkikrnyr ywlggvials lvgfsllgvr
      241 vsgqatqlta nyhqqldkkd tllqaneqfy kgnynkavgl yekidydkkq latdliekeq
      301 yqqaltvdpt slesvienly ereqketlld lngkkak
//
LOCUS       WP_235146755             210 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DotU family type IV/VI secretion system protein
            [Franconibacter].
ACCESSION   WP_235146755
VERSION     WP_235146755.1
KEYWORDS    RefSeq.
SOURCE      Franconibacter
  ORGANISM  Franconibacter
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae.
REFERENCE   1  (residues 1 to 210)
  AUTHORS   Filloux,A.
  TITLE     The rise of the Type VI secretion system
  JOURNAL   F1000Prime Rep 5, 52 (2013)
   PUBMED   24381728
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021377.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09850.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Franconibacter"
                     /db_xref="taxon:1649295"
     Protein         1..210
                     /product="DotU family type IV/VI secretion system protein"
                     /calculated_mol_wt=23693
     Region          1..210
                     /region_name="DotU"
                     /note="Type VI protein secretion system component
                     TssL/VasF/DotU [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3455"
                     /db_xref="CDD:442678"
ORIGIN      
        1 mqdtylfvmd ihhqpalvrd ealynramtl vetvqdrlka akesddfihh viyaqcamld
       61 davlnsasse dnhvwlhgpl qsvfvhqlra gevmpertra llrevvpdpr llvlyqrlyg
      121 mgysqrwmdk ypdharrekt aelaeslnal vpagdrplsa plvverrptv rgrllhtrma
      181 hitlallvta glilglqssl qhllrsvlpg
//
LOCUS       WP_235146839             281 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: transporter substrate-binding domain-containing
            protein [Franconibacter].
ACCESSION   WP_235146839
VERSION     WP_235146839.1
KEYWORDS    RefSeq.
SOURCE      Franconibacter
  ORGANISM  Franconibacter
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae.
REFERENCE   1  (residues 1 to 281)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Franconibacter"
                     /db_xref="taxon:1649295"
     Protein         1..281
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=29733
     Region          35..263
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 maagidlkan etpihtpanp aaiakipsgy rfvepgtltv aisalnsppl allasdnrtr
       61 igsdpdiaql ladslglkvk lvptawedwp lgisagkydv alvniavteq rkmkfdfaty
      121 rvdtlgfsvk stseiqsint ppdvagkrvi vgsgtnqeki llkwdkenqa nglkpvqpiy
      181 ltddasgnly lqsgradaif gphsvgayka altgktrlvg kgplkayvat ttkkgnglvy
      241 alqegingai hsgayqqvla rwgeqeerve asvvnppgia y
//
LOCUS       WP_235146871             276 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Franconibacter
            pulveris].
ACCESSION   WP_235146871
VERSION     WP_235146871.1
KEYWORDS    RefSeq.
SOURCE      Franconibacter pulveris
  ORGANISM  Franconibacter pulveris
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Franconibacter.
REFERENCE   1  (residues 1 to 276)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 276)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Franconibacter pulveris"
                     /db_xref="taxon:435910"
     Protein         1..276
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=29149
     Region          32..273
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(39,41..42,44,63..65,120..121,162..164,171,175,
                     199..202)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(132,164,171,175)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mvvrslyggg vpsstgllac paaalnsnev vmsrifitgs adglgyaaae nlladghevv
       61 ahvrspqrle avkplidqga qvvvgdlahl namqdvaaqv nklgqmdavi hnagvysgps
      121 vvpvnvvapy vltsliakpa rliylssgmh lngqprlegv dwsgaresat ysdsklfitt
      181 ltmalarrwp dilcnavdpg wvptkmggan apgdlqlghl tqewlavsdd seartsggyw
      241 hhqkrrtpha aardeafqha lleslarttg itlppr
//
LOCUS       WP_235146981             151 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6879 family protein [Amycolatopsis].
ACCESSION   WP_235146981
VERSION     WP_235146981.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis
  ORGANISM  Amycolatopsis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF045158.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21806.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Amycolatopsis"
                     /db_xref="taxon:1813"
     Protein         1..151
                     /product="DUF6879 family protein"
                     /calculated_mol_wt=17774
ORIGIN      
        1 metfdqydat yeneslrkfl agepddlpwm qswldmirea kakgrifsrv rivsmpltdy
       61 srfgvwcsqf tggagediry lprgladrlp khdywlfdsr klvrmhfddd mgflggevve
      121 dpeqvvhhny wrdaawhhai rrddfakqqs l
//
LOCUS       WP_235147417             799 aa            linear   BCT 02-MAR-2025
DEFINITION  carbohydrate-binding protein [Escherichia coli].
ACCESSION   WP_235147417
VERSION     WP_235147417.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 799)
  AUTHORS   Hirano,T., Sugiyama,K., Sakaki,Y., Hakamata,W., Park,S.Y. and
            Nishio,T.
  TITLE     Structure-based analysis of domain function of chitin
            oligosaccharide deacetylase from Vibrio parahaemolyticus
  JOURNAL   FEBS Lett 589 (1), 145-151 (2015)
   PUBMED   25479092
REFERENCE   2  (residues 1 to 799)
  AUTHORS   Mine,S., Nakamura,T., Sato,T., Ikegami,T. and Uegaki,K.
  TITLE     Solution structure of the chitin-binding domain 1 (ChBD1) of a
            hyperthermophilic chitinase from Pyrococcus furiosus
  JOURNAL   J Biochem 155 (2), 115-122 (2014)
   PUBMED   24272751
REFERENCE   3  (residues 1 to 799)
  AUTHORS   Kezuka,Y., Ohishi,M., Itoh,Y., Watanabe,J., Mitsutomi,M.,
            Watanabe,T. and Nonaka,T.
  TITLE     Structural studies of a two-domain chitinase from Streptomyces
            griseus HUT6037
  JOURNAL   J Mol Biol 358 (2), 472-484 (2006)
   PUBMED   16516924
REFERENCE   4  (residues 1 to 799)
  AUTHORS   Akagi,K., Watanabe,J., Hara,M., Kezuka,Y., Chikaishi,E.,
            Yamaguchi,T., Akutsu,H., Nonaka,T., Watanabe,T. and Ikegami,T.
  TITLE     Identification of the substrate interaction region of the
            chitin-binding domain of Streptomyces griseus chitinase C
  JOURNAL   J Biochem 139 (3), 483-493 (2006)
   PUBMED   16567413
REFERENCE   5  (residues 1 to 799)
  AUTHORS   Ikegami,T., Okada,T., Hashimoto,M., Seino,S., Watanabe,T. and
            Shirakawa,M.
  TITLE     Solution structure of the chitin-binding domain of Bacillus
            circulans WL-12 chitinase A1
  JOURNAL   J Biol Chem 275 (18), 13654-13661 (2000)
   PUBMED   10788483
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014853.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02839.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..799
                     /product="carbohydrate-binding protein"
                     /GO_component="GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_function="GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=86609
     Region          27..70
                     /region_name="ChtBD3"
                     /note="Chitin-binding domain type 3; smart00495"
                     /db_xref="CDD:197760"
     Region          128..173
                     /region_name="ChtBD3"
                     /note="Chitin-binding domain type 3; smart00495"
                     /db_xref="CDD:197760"
     Region          363..411
                     /region_name="ChiC_BD"
                     /note="Chitin-binding domain of chitinase C; cd12215"
                     /db_xref="CDD:213178"
     Region          489..794
                     /region_name="GH18_PF-ChiA-like"
                     /note="PF-ChiA is an uncharacterized chitinase found in
                     the hyperthermophilic archaeon Pyrococcus furiosus with a
                     glycosyl hydrolase family 18 (GH18) catalytic domain as
                     well as a cellulose-binding domain. Members of this domain
                     family are found not only in...; cd06543"
                     /db_xref="CDD:119360"
     Site            order(494,521,562,598,600,602,672..673,726,760)
                     /site_type="active"
                     /db_xref="CDD:119360"
ORIGIN      
        1 mklniftksm igmglvcsal palameawnn qqggnkyqvi fdgkiyenaw wvsstncpgk
       61 akandatnpw rlkrtataae isqfgntlsc eksgsssssn sntpasntpa nggsatpaqg
      121 tvpsnssvva wnkqqggqtw yvvfngavyk nawwvassnc pgdakgndas npwryvraat
      181 ateitqygnp gscsvkpdnn ggavtpvdpt petpetpvtp tpdnnepstp adssndyslq
      241 awsgqegsei yhvifngnvy qnawwvgsed cprgtsvens nnpwrlvrta taaemsqygn
      301 pttceidngg viiadgfqas kaysassivd yndahyktsv dqdawgfvpg gdnpwkkyep
      361 akawsastvy vkgdrvvvdg qayealfwtq sdnpalianq natgsnsrpw kplgktqsys
      421 neelnnapqf npetlyasdt lirfngenyi sqskvqkvsp sdsnpwrvfv dwtgtkervg
      481 tpkkawpkhv yapyvdftln tipdlaalak nhnvnhftla fvvskdantc lptwgtaygm
      541 qnyaqyskik alreaggdvm lsiggannap laascknvdd lmqhyydivd nlnlrvldfd
      601 iegtwvadqa sierrnlavk kvqdkwkseg kdiaiwytlp ilptgltpeg mnvlsdakak
      661 gvelagvnvm tmdygnaicq santegqnih gkcatsaian lhaqlkglyg nksdaeidam
      721 mdttpmvgvn dvqgevfyls darlvmqdaq krnlgmvgiw siardlpggt nlspefhglt
      781 keqapkyafs eifapftkq
//
LOCUS       WP_235147421             128 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5906 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235147421
VERSION     WP_235147421.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040238.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19263.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>128
                     /product="DUF5906 domain-containing protein"
     Region          <1..>128
                     /region_name="COG3378"
                     /note="DNA primase, phage- or plasmid-associated
                     [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442605"
ORIGIN      
        1 ggraekrdvi laalfmvlan rydwqlflev tgpggsgksi maeiatllag ednatsatie
       61 tlespreraa ltgfslirlp dqekwsgdga glkaitggda vsvdpkyrda ysthipavil
      121 avnnnpmr
//
LOCUS       WP_235147435             153 aa            linear   BCT 02-MAR-2025
DEFINITION  PerC family transcriptional regulator, partial [Escherichia coli].
ACCESSION   WP_235147435
VERSION     WP_235147435.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Gomez-Duarte,O.G. and Kaper,J.B.
  TITLE     A plasmid-encoded regulatory region activates chromosomal eaeA
            expression in enteropathogenic Escherichia coli
  JOURNAL   Infect Immun 63 (5), 1767-1776 (1995)
   PUBMED   7729884
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06069.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>153
                     /product="PerC family transcriptional regulator"
     Region          100..>147
                     /region_name="PerC"
                     /note="PerC transcriptional activator; pfam06069"
                     /db_xref="CDD:310570"
ORIGIN      
        1 mimsllnevq kfieahpgct sgdiadafag ysrqrvlqsa sklrqsgrva hrcegdtrrh
       61 fprlteraqe pepqpvretr pvrhfyvgtn dprvilcltr qaeelesrgl yrraatvwma
      121 afreshsqpe rnnflarrer clrksskrva sge
//
LOCUS       WP_235147458              43 aa            linear   BCT 02-MAR-2025
DEFINITION  DinI-like family protein, partial [Escherichia coli].
ACCESSION   WP_235147458
VERSION     WP_235147458.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 43)
  AUTHORS   Yoshimasu,M., Aihara,H., Ito,Y., Rajesh,S., Ishibe,S., Mikawa,T.,
            Yokoyama,S. and Shibata,T.
  TITLE     An NMR study on the interaction of Escherichia coli DinI with
            RecA-ssDNA complexes
  JOURNAL   Nucleic Acids Res 31 (6), 1735-1743 (2003)
   PUBMED   12626715
REFERENCE   2  (residues 1 to 43)
  AUTHORS   Ramirez,B.E., Voloshin,O.N., Camerini-Otero,R.D. and Bax,A.
  TITLE     Solution structure of DinI provides insight into its mode of RecA
            inactivation
  JOURNAL   Protein Sci 9 (11), 2161-2169 (2000)
   PUBMED   11152126
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017947.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06183.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..43
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..43
                     /product="DinI-like family protein"
     Region          <1..41
                     /region_name="DinI"
                     /note="DinI-like family; cl11630"
                     /db_xref="CDD:448327"
ORIGIN      
        1 vivkatsndg lsvsrtadkd saktfvqetl kdtwesadew fvh
//
LOCUS       WP_235147562             277 aa            linear   BCT 02-MAR-2025
DEFINITION  TraX family protein [Franconibacter pulveris].
ACCESSION   WP_235147562
VERSION     WP_235147562.1
KEYWORDS    RefSeq.
SOURCE      Franconibacter pulveris
  ORGANISM  Franconibacter pulveris
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Franconibacter.
REFERENCE   1  (residues 1 to 277)
  AUTHORS   Maneewannakul,K., Maneewannakul,S. and Ippen-Ihler,K.
  TITLE     Characterization of traX, the F plasmid locus required for
            acetylation of F-pilin subunits
  JOURNAL   J Bacteriol 177 (11), 2957-2964 (1995)
   PUBMED   7768788
REFERENCE   2  (residues 1 to 277)
  AUTHORS   Moore,D., Hamilton,C.M., Maneewannakul,K., Mintz,Y., Frost,L.S. and
            Ippen-Ihler,K.
  TITLE     The Escherichia coli K-12 F plasmid gene traX is required for
            acetylation of F pilin
  JOURNAL   J Bacteriol 175 (5), 1375-1383 (1993)
   PUBMED   8444800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017655.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05857.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Franconibacter pulveris"
                     /db_xref="taxon:435910"
     Protein         1..277
                     /product="TraX family protein"
                     /calculated_mol_wt=31201
     Region          43..270
                     /region_name="TraX"
                     /note="TraX protein; cl05434"
                     /db_xref="CDD:414418"
ORIGIN      
        1 msytdrlqpf vserplpisg lsgnkkammn dplslklspg aidmakllal lamvidhant
       61 iflspsrpel fafgrmafpl faliwalnlh rqpsrlqara nrlwlwsfit qpvfwlafre
      121 ihygyalnil fvfagvtqlf awayryqqrg vaagtvllcl lvwplnfasy gpqgiiltls
      181 lavlfspelq rwralsltga vvallmlngm yrvaqqpldt ltyyilptlv lpfaglylaa
      241 rlrpegsprf lprqffyyay aghlliygvl ltileka
//
LOCUS       WP_235147505             121 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA-packaging protein FI [Escherichia coli].
ACCESSION   WP_235147505
VERSION     WP_235147505.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 121)
  AUTHORS   Smith,M.P. and Feiss,M.
  TITLE     Sites and gene products involved in lambdoid phage DNA packaging
  JOURNAL   J Bacteriol 175 (8), 2393-2399 (1993)
   PUBMED   8468297
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025366.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14000.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     gene            1..121
                     /gene="gpFI"
     Protein         1..121
                     /product="DNA-packaging protein FI"
                     /calculated_mol_wt=12938
     Region          2..118
                     /region_name="Packaging_FI"
                     /note="DNA packaging protein FI; pfam14000"
                     /db_xref="CDD:290707"
ORIGIN      
        1 mlgeqlnrdv sltgtkeela lrvaeleeel ddsddtsgqd tpvspenalt ghenevvsep
       61 pdtviqdtad lvtvvalvtl htdalhatrd epvdfvlpgt efrvsagvav emterglarm
      121 q
//
LOCUS       WP_235147598             378 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: helix-turn-helix domain-containing protein
            [Exiguobacterium].
ACCESSION   WP_235147598
VERSION     WP_235147598.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium
  ORGANISM  Exiguobacterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Exiguobacterium"
                     /db_xref="taxon:33986"
     Protein         1..378
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=42935
     Region          <200..373
                     /region_name="adjacent_YSIRK"
                     /note="YSIRK-targeted surface antigen transcriptional
                     regulator; TIGR04094"
                     /db_xref="CDD:274977"
ORIGIN      
        1 mtqiaehlfg mtgffisyqd qehvsielrp sapkhpanll iedtwptlkn hrpllhtlkd
       61 gtaylfvdvp dqgmyrigpv llqsalfrah iqdetyhqfy kvlprttenr lidcahllyr
      121 llhgeglssr didhvsdiqe eeiplvseap shtgvtayrk awqreqqiid wissgqserl
      181 attyslpayg efgtlarhqp lraeknlllg tvllsaraai rgglepdeaf slsdrmieti
      241 eaatsiaelr nrhvritvsf aeavkeiqal rhsphvlaai ryiqqhlydp lsvssisqai
      301 hvssnylsvl fkdetglpla ryvirerire akrllrssdd slltisnrlh fssqshfsqa
      361 fkqitgetpt hyrqktdf
//
LOCUS       WP_235147506             122 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA-packaging protein FI, partial [Escherichia coli].
ACCESSION   WP_235147506
VERSION     WP_235147506.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 122)
  AUTHORS   Smith,M.P. and Feiss,M.
  TITLE     Sites and gene products involved in lambdoid phage DNA packaging
  JOURNAL   J Bacteriol 175 (8), 2393-2399 (1993)
   PUBMED   8468297
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025366.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14000.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     gene            <1..122
                     /gene="gpFI"
     Protein         <1..122
                     /product="DNA-packaging protein FI"
     Region          1..119
                     /region_name="Packaging_FI"
                     /note="DNA packaging protein FI; pfam14000"
                     /db_xref="CDD:290707"
ORIGIN      
        1 lqvlgeqlnr dvsltgtkee lvlrvaelee elddtddaag qdtsvspena ltghenevvs
       61 aqpdtvtdta dlvtvvalvt lhtdalhatr deavafvlpg tafrvsagvs aemterglar
      121 mq
//
LOCUS       WP_235147445              58 aa            linear   BCT 02-MAR-2025
DEFINITION  Rop family plasmid primer RNA-binding protein [Escherichia coli].
ACCESSION   WP_235147445
VERSION     WP_235147445.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 58)
  AUTHORS   Banner,D.W., Kokkinidis,M. and Tsernoglou,D.
  TITLE     Structure of the ColE1 rop protein at 1.7 A resolution
  JOURNAL   J Mol Biol 196 (3), 657-675 (1987)
   PUBMED   3681971
REFERENCE   2  (residues 1 to 58)
  AUTHORS   Cesareni,G., Muesing,M.A. and Polisky,B.
  TITLE     Control of ColE1 DNA replication: the rop gene product negatively
            affects transcription from the replication primer promoter
  JOURNAL   Proc Natl Acad Sci U S A 79 (20), 6313-6317 (1982)
   PUBMED   6183660
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013937.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01815.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..58
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..58
                     /product="Rop family plasmid primer RNA-binding protein"
                     /calculated_mol_wt=6447
     Region          <9..51
                     /region_name="Rop"
                     /note="Rop protein; pfam01815"
                     /db_xref="CDD:426451"
ORIGIN      
        1 mtfhpsltik sqsltllekl daldadeqaa mceklhelae elqnsmqtrf eaenrtgi
//
LOCUS       WP_235147632             537 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase [Exiguobacterium sp. MH3].
ACCESSION   WP_235147632
VERSION     WP_235147632.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium sp. MH3
  ORGANISM  Exiguobacterium sp. MH3
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis; Exiguobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06028.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Exiguobacterium sp. MH3"
                     /db_xref="taxon:1399115"
     Protein         1..537
                     /product="alpha/beta hydrolase"
                     /calculated_mol_wt=60315
     Region          <113..235
                     /region_name="DUF3153"
                     /note="Protein of unknown function (DUF3153); pfam11353"
                     /db_xref="CDD:402797"
     Region          251..529
                     /region_name="COG4814"
                     /note="Uncharacterized conserved protein with an
                     alpha/beta hydrolase fold [Function unknown]"
                     /db_xref="CDD:443842"
ORIGIN      
        1 mstkkkgill sflmltlllg gciriqydat ihtdqsvnlk ttyaakehpv arllnlnpnw
       61 nsyvkqaekn gyaaktfktk ddyegirmqk tfanfkdmts ikdewktgig gilippdtkf
      121 dmkksdgfwf dtyrldtnid lsidrlnikg yqptgqvkkl adryirqadi eiklhgpkvi
      181 glqngekidw snyhdvswkl ygtkanqlql iayvpnptgw iitsivllig vglflywvfh
      241 rvrrlrrqql ktisisllvc livgggawwv faedtssapp ptrqivtqgk seivptflvh
      301 glfgtertfv pmiqnftnkk vaddggrcdv trsgkatcsv kpsstgyplv rivfaddeas
      361 ladqqkwlna aiaaydakqk atfadiqlvg hsmggvdvva ytvqeempyh vrkvvtldsp
      421 iagsdyaklg ltlaplgtnt nspairdlak gspamnnltq rletwprdvl vysfgakggd
      481 fnlislnssf alenytdniq tksykydhft ihrrepvfre irnflfkenr vteeeps
//
LOCUS       WP_235147680             114 aa            linear   BCT 02-MAR-2025
DEFINITION  winged helix-turn-helix transcriptional regulator [Enterobacter
            cloacae].
ACCESSION   WP_235147680
VERSION     WP_235147680.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter cloacae
  ORGANISM  Enterobacter cloacae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024804.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13412.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Enterobacter cloacae"
                     /db_xref="taxon:550"
     Protein         1..114
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /calculated_mol_wt=12332
     Region          1..>74
                     /region_name="pheS"
                     /note="phenylalanine--tRNA ligase subunit alpha; PRK04172"
                     /db_xref="CDD:235239"
ORIGIN      
        1 mtitireqvl aalrnnpgls naklagligm dtkkisgtvs tlladglisc egkygqrlys
       61 ltsygmrfap dtipgmkqgk skliqrtdtn vicqecrnsp amrrvlmvwg regv
//
LOCUS       WP_235147736             238 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1627 domain-containing protein [Enterobacter cloacae].
ACCESSION   WP_235147736
VERSION     WP_235147736.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter cloacae
  ORGANISM  Enterobacter cloacae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019406.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07789.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Enterobacter cloacae"
                     /db_xref="taxon:550"
     Protein         1..238
                     /product="DUF1627 domain-containing protein"
                     /calculated_mol_wt=25710
     Region          94..233
                     /region_name="DUF1627"
                     /note="Protein of unknown function (DUF1627); pfam07789"
                     /db_xref="CDD:429660"
ORIGIN      
        1 mesvidalka mkkatyreva arldiepvea lnmlrehkqq glcdffdgsw svgtakeqak
       61 elakapavap vhkapqlkge ipttvdpdvv rqllgkngsm ttaalaaavn rnargmvsvm
      121 laferqgvvi kngkgkgvtw slpvtgqtet dnteavqpep gtldnelass pdskslneii
      181 gdipaftarp ddliipssrf isneirrtka klsnlqrlqg avrelrrhkh llqgmgnd
//
LOCUS       WP_235147760              75 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: FimD/PapC C-terminal domain-containing protein
            [Salmonella].
ACCESSION   WP_235147760
VERSION     WP_235147760.1
KEYWORDS    RefSeq.
SOURCE      Salmonella
  ORGANISM  Salmonella
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae.
REFERENCE   1  (residues 1 to 75)
  AUTHORS   Ford,B., Rego,A.T., Ragan,T.J., Pinkner,J., Dodson,K.,
            Driscoll,P.C., Hultgren,S. and Waksman,G.
  TITLE     Structural homology between the C-terminal domain of the PapC usher
            and its plug
  JOURNAL   J Bacteriol 192 (7), 1824-1831 (2010)
   PUBMED   20118254
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025319.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13953.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Salmonella"
                     /db_xref="taxon:590"
     Protein         1..75
                     /product="FimD/PapC C-terminal domain-containing protein"
                     /calculated_mol_wt=7691
     Region          <1..70
                     /region_name="PRK15235"
                     /note="outer membrane fimbrial usher protein SefC;
                     Provisional"
                     /db_xref="CDD:185150"
ORIGIN      
        1 mgtnalirit rtngkplalg tvlslknndg viqstsivge dgqayvsgls gvqkliaswg
       61 nkpsdtctvf llssr
//
LOCUS       WP_235147814            1062 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Enterobacter cloacae].
ACCESSION   WP_235147814
VERSION     WP_235147814.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter cloacae
  ORGANISM  Enterobacter cloacae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 1062)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 1062)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 1062)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 1062)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Enterobacter cloacae"
                     /db_xref="taxon:550"
     Protein         1..1062
                     /product="ATP-binding protein"
                     /calculated_mol_wt=117137
     Region          1..1008
                     /region_name="PRK09959"
                     /note="acid-sensing system histidine kinase EvgS"
                     /db_xref="CDD:182169"
ORIGIN      
        1 mravtfillf ciaftvcaaq qeeslrllar shekviepgl sgsewrwvre hrkirlavwe
       61 pmmppyditt glndyggina dftglvaenl gleievvryp tyedalsalr agkadfmpqa
      121 gdsqqqqglm lsvpysdnip vevlntdasp depvkriavs pvysssdvla rypgadivnf
      181 sstrhaleal afreidlffs daitarylas qsnlsnlsir pvadtfeasg fsfaampkma
      241 vwiailnkml talpenagve ihrrwsggip lslseeppry tslehkwike hsrirvavaq
      301 dnapiaffne rgqlrgilad lltalrlrtg ftfeirryps qaaafrainr geaeliagvt
      361 qegiwqadll ttrtwlynsw vmvgralpgk ealqprvvsl rgeapdgwlg rqnsgqtakv
      421 dtwwqgfnsv vkdkndmmvv pliianaqlt rkefaslkil asidaeplrf afgasrqawp
      481 litilnkali nippedlhal trgsntgnaf asvstsalsi twlvtftaag lallalvagw
      541 iyrrrriqqa rirkliqtlr aakhraerar rgksaflatm sheirtpvsa iigmlelvmk
      601 rpdhapqnpq sirvawdaaq sllllignil dvermasgrl vlrperaslr nliegtvsqf
      661 eglaaqkslk lllemdtalk gdvlidvmrf rqivtnllgn aikftdhgqv mlraqpqwqd
      721 gefmllelai adtgegidia tqqrlfqpfs qgesrtraqg sglglyicrq ladmmdgdlt
      781 lnsvpgegtt vtvtlrlpvm aalpeketka cvppgkraal timvvddnpv grmlltqqle
      841 wlghavtqhd spakllesla irqpdavitd cnmpemsgya lsriineyyp dvtvfgitad
      901 aresvrdear eagmrdcivk pvtlvalenl lapltpsgks pvaspysitl ppalldgehl
      961 atfldlqmtv leetlgdial wrkdpgtplk dalhrlrggi qllgmpalea rcleqeraad
     1021 sggirqleee iqalraalqr wretglqpge tvlqqnedgr ta
//
LOCUS       WP_235147940             649 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase, partial [Fischerella muscicola].
ACCESSION   WP_235147940
VERSION     WP_235147940.1
KEYWORDS    RefSeq.
SOURCE      Fischerella muscicola
  ORGANISM  Fischerella muscicola
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 649)
  AUTHORS   Tavladoraki,P., Schinina,M.E., Cecconi,F., Di Agostino,S.,
            Manera,F., Rea,G., Mariottini,P., Federico,R. and Angelini,R.
  TITLE     Maize polyamine oxidase: primary structure from protein and cDNA
            sequencing
  JOURNAL   FEBS Lett 426 (1), 62-66 (1998)
   PUBMED   9598979
REFERENCE   2  (residues 1 to 649)
  AUTHORS   Tsugeno,Y. and Ito,A.
  TITLE     A key amino acid responsible for substrate selectivity of monoamine
            oxidase A and B
  JOURNAL   J Biol Chem 272 (22), 14033-14036 (1997)
   PUBMED   9162023
REFERENCE   3  (residues 1 to 649)
  AUTHORS   Schilling,B. and Lerch,K.
  TITLE     Cloning, sequencing and heterologous expression of the monoamine
            oxidase gene from Aspergillus niger
  JOURNAL   Mol Gen Genet 247 (4), 430-438 (1995)
   PUBMED   7770050
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Fischerella muscicola"
                     /db_xref="taxon:92938"
     Protein         <1..649
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
     Region          <47..236
                     /region_name="YobN"
                     /note="Monoamine oxidase [Amino acid transport and
                     metabolism]; COG1231"
                     /db_xref="CDD:440844"
     Region          <241..>649
                     /region_name="Ferritin_like"
                     /note="Ferritin-like superfamily of diiron-containing
                     four-helix-bundle proteins; cl00264"
                     /db_xref="CDD:469698"
ORIGIN      
        1 esdlssklmd elerldlqpy fnedgqtidl hnfikanpsl rarcskaldm flsdilvets
       61 hdllqleggm dqlinhlaaa ikapiacnqk vvaldvqqdh vqvswleagq lhtrrcdyvl
      121 ctipfsivrq mdlsgfddek laaihntfyc patkvlfhca qpfwqkdgit ggasfsdesi
      181 rqiyypsvqg kpskvstlla sytigddady lgmmseterh tfvknavskl hpeieapgmv
      241 ldmvtavpcv gravkpgpgp thaiaakldl gelelrtvts qrlvariptk ayqseahqlt
      301 sgvvdvplae pfenlhheie qqglcivdgr gqilvqeqei nlqiddaclf lefpdwkrgk
      361 dyieeieirs fvrgrpapve tvylrqfynp kglpqlryef erdsgnvgqi fhfppsteln
      421 ivhfkpgkre eindfaptcv vstnsegrgw vtlhgvqpgt trvllsaqpd elpcdpnqpd
      481 eamiaydndd llgfwsgags favrvlpddw hlediedeav dfnliyehil ayyelcfsfm
      541 kaevfsladr ckvetyarlm wqmcdprnrn ktyympptrd lsqpkamllr kflhnqqqvg
      601 yiptsqplpk rtqrtiqtrd elvtalrhaa elevavmlqy iyaaysipn
//
LOCUS       WP_235147941             453 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: cytochrome c peroxidase [Fischerella].
ACCESSION   WP_235147941
VERSION     WP_235147941.1
KEYWORDS    RefSeq.
SOURCE      Fischerella
  ORGANISM  Fischerella
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae.
REFERENCE   1  (residues 1 to 453)
  AUTHORS   Gak,E.R., Tsygankov,Y.D. and Chistoserdov,A.Y.
  TITLE     Organization of methylamine utilization genes (mau) in
            'Methylobacillus flagellatum ' KT and analysis of mau mutants
  JOURNAL   Microbiology (Reading) 143 (Pt 6), 1827-1835 (1997)
   PUBMED   9202457
REFERENCE   2  (residues 1 to 453)
  AUTHORS   Fulop,V., Ridout,C.J., Greenwood,C. and Hajdu,J.
  TITLE     Crystal structure of the di-haem cytochrome c peroxidase from
            Pseudomonas aeruginosa
  JOURNAL   Structure 3 (11), 1225-1233 (1995)
   PUBMED   8591033
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015131.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03150.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Fischerella"
                     /db_xref="taxon:1190"
     Protein         1..453
                     /product="cytochrome c peroxidase"
                     /EC_number="1.11.1.5"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=49791
     Region          44..>436
                     /region_name="MauG"
                     /note="Cytochrome c peroxidase [Posttranslational
                     modification, protein turnover, chaperones]; COG1858"
                     /db_xref="CDD:441463"
ORIGIN      
        1 mtaavicght vsaqvtpapa iaslktvsvp epdnigdfir dktaaiklgk slfwdmqlgs
       61 dgittcasch fhagadnrsk nqinpgvera niddpivqda tfqvggaany qlkpedfpfh
      121 klsnpddans tvisdsndiv ssqgvfysef vevvpgqaed kvnpkedlif nvggtqvrrv
      181 eprnaptvid avfnfrnfwd graqnifngv npwglrdpna fvgkasdpnq lelvkvslkn
      241 sslasqalap pvstfemsad grtfenigdk lgrvhkyrqi qeesetetle tghkllplrp
      301 lgkqvvhped svlgaesrfp epglksitye klikdafnpe wwrsskwvqv nadgsqtiid
      361 qpnsseknqy rlieynfplf fglaiqsyes tlisdqtpfd sfmegnttal seqqqrglqt
      421 fqdqgcvgch fgaeftiasv shireqgria pnr
//
LOCUS       WP_235148002             670 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: Eco57I restriction-modification methylase
            domain-containing protein [Fischerella].
ACCESSION   WP_235148002
VERSION     WP_235148002.1
KEYWORDS    RefSeq.
SOURCE      Fischerella
  ORGANISM  Fischerella
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae.
REFERENCE   1  (residues 1 to 670)
  AUTHORS   Schluckebier,G., Kozak,M., Bleimling,N., Weinhold,E. and Saenger,W.
  TITLE     Differential binding of S-adenosylmethionine S-adenosylhomocysteine
            and Sinefungin to the adenine-specific DNA methyltransferase M.TaqI
  JOURNAL   J Mol Biol 265 (1), 56-67 (1997)
   PUBMED   8995524
REFERENCE   2  (residues 1 to 670)
  AUTHORS   Janulaitis,A., Vaisvila,R., Timinskas,A., Klimasauskas,S. and
            Butkus,V.
  TITLE     Cloning and sequence analysis of the genes coding for Eco57I type
            IV restriction-modification enzymes
  JOURNAL   Nucleic Acids Res 20 (22), 6051-6056 (1992)
   PUBMED   1334261
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019291.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07669.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Fischerella"
                     /db_xref="taxon:1190"
     Protein         1..670
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=75525
     Region          13..214
                     /region_name="HsdM"
                     /note="Type I restriction-modification system, DNA
                     methylase subunit [Defense mechanisms]; COG0286"
                     /db_xref="CDD:440055"
     Region          512..650
                     /region_name="BsuBI_PstI_RE_N"
                     /note="BsuBI/PstI restriction endonuclease HTH domain;
                     pfam17728"
                     /db_xref="CDD:435996"
ORIGIN      
        1 mfltdsadit riyfssrlnl kqrselgqfl tpapiarfma gqfsslsdhi slldpgagvg
       61 sltaafverl lanpnevksc fitacevesa flsslkqcli eccaalkskg iqanyclree
      121 sfieafpqin lplfttssin fthailnppy kkihsqsvek kilskigiet vnlysafvwl
      181 tilqlaegge ivaitprsfc ngsyfrpfrk aflesmglkk ihifesrsaa faedevlqen
      241 iifhaiktks kpdyveiasn sgteldkfse lrhvpysevv eandsesfih ivtnsledcl
      301 rvqmdkfsst ldeiglevst gpvvdfrlks alrtyldeqs vpllypeamk agkvlfppsn
      361 prkaiaieqn qqtskwlvqs gwyvlikrfs akeekrrvva avcspldapa igienhlnyy
      421 hakgkgmnad larglaafln stlfdhyfrq fsghtqvnat dlrrikypck ddlirlgsqi
      481 gdfhfdqeql dqvvhktlsi mteainavqa skrieealai lknisapreq qnersalcll
      541 aladirpetp wnqataprrg itemmdwfrd hygkqyapnt retvrrqtmh qfvqmgivve
      601 npdrpdrpin spkwcyqlhq qalsllksyg seqweearrn yvvsvtnllq arnrnipmip
      661 vtlpdgqaiq
//
LOCUS       WP_235148004              28 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: pentapeptide repeat-containing protein [Fischerella].
ACCESSION   WP_235148004
VERSION     WP_235148004.1
KEYWORDS    RefSeq.
SOURCE      Fischerella
  ORGANISM  Fischerella
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae.
REFERENCE   1  (residues 1 to 28)
  AUTHORS   Bateman,A., Murzin,A.G. and Teichmann,S.A.
  TITLE     Structure and distribution of pentapeptide repeats in bacteria
  JOURNAL   Protein Sci 7 (6), 1477-1480 (1998)
   PUBMED   9655353
REFERENCE   2  (residues 1 to 28)
  AUTHORS   Kieselbach,T., Mant,A., Robinson,C. and Schroder,W.P.
  TITLE     Characterisation of an Arabidopsis cDNA encoding a thylakoid lumen
            protein related to a novel 'pentapeptide repeat' family of proteins
  JOURNAL   FEBS Lett 428 (3), 241-244 (1998)
   PUBMED   9654141
REFERENCE   3  (residues 1 to 28)
  AUTHORS   Black,K., Buikema,W.J. and Haselkorn,R.
  TITLE     The hglK gene is required for localization of heterocyst-specific
            glycolipids in the cyanobacterium Anabaena sp. strain PCC 7120
  JOURNAL   J Bacteriol 177 (22), 6440-6448 (1995)
   PUBMED   7592418
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013003.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00805.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..28
                     /organism="Fischerella"
                     /db_xref="taxon:1190"
     Protein         1..28
                     /product="pentapeptide repeat-containing protein"
                     /calculated_mol_wt=2830
ORIGIN      
        1 mkdanlsgay lenvklsgai mpdgtihd
//
LOCUS       WP_235148006              73 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: BsuBI/PstI family type II restriction endonuclease
            [Fischerella].
ACCESSION   WP_235148006
VERSION     WP_235148006.1
KEYWORDS    RefSeq.
SOURCE      Fischerella
  ORGANISM  Fischerella
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae.
REFERENCE   1  (residues 1 to 73)
  AUTHORS   Steczkiewicz,K., Muszewska,A., Knizewski,L., Rychlewski,L. and
            Ginalski,K.
  TITLE     Sequence, structure and functional diversity of PD-(D/E)XK
            phosphodiesterase superfamily
  JOURNAL   Nucleic Acids Res 40 (15), 7016-7045 (2012)
   PUBMED   22638584
REFERENCE   2  (residues 1 to 73)
  AUTHORS   Xu,G.L., Kapfer,W., Walter,J. and Trautner,T.A.
  TITLE     BsuBI--an isospecific restriction and modification system of PstI:
            characterization of the BsuBI genes and enzymes
  JOURNAL   Nucleic Acids Res 20 (24), 6517-6523 (1992)
   PUBMED   1480472
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018339.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06616.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Fischerella"
                     /db_xref="taxon:1190"
     Protein         1..73
                     /product="BsuBI/PstI family type II restriction
                     endonuclease"
                     /GO_function="GO:0000287 - magnesium ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0009036 - type II site-specific
                     deoxyribonuclease activity [Evidence IEA]"
                     /GO_process="GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /calculated_mol_wt=8519
     Region          <1..59
                     /region_name="BsuBI_PstI_RE"
                     /note="BsuBI/PstI restriction endonuclease domain;
                     pfam06616"
                     /db_xref="CDD:429034"
ORIGIN      
        1 mtvkpfselk qlfqssrkgl vfvtafpsrk emtrylaeis wetevwladq pdhmihfnge
       61 rflgpyedpk nrs
//
LOCUS       WP_235148036             529 aa            linear   BCT 02-MAR-2025
DEFINITION  GMC oxidoreductase [Fischerella muscicola].
ACCESSION   WP_235148036
VERSION     WP_235148036.1
KEYWORDS    RefSeq.
SOURCE      Fischerella muscicola
  ORGANISM  Fischerella muscicola
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05199.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Fischerella muscicola"
                     /db_xref="taxon:92938"
     Protein         1..529
                     /product="GMC oxidoreductase"
                     /GO_function="GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /calculated_mol_wt=57250
     Region          30..>132
                     /region_name="BetA"
                     /note="Choline dehydrogenase or related flavoprotein
                     [Lipid transport and metabolism, General function
                     prediction only]; COG2303"
                     /db_xref="CDD:441878"
     Region          31..>60
                     /region_name="COG1233"
                     /note="Phytoene dehydrogenase-related protein [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:440846"
     Region          117..314
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Region          <452..505
                     /region_name="GMC_oxred_C"
                     /note="GMC oxidoreductase; pfam05199"
                     /db_xref="CDD:398739"
ORIGIN      
        1 mlqatmfsig laaplyysyy tyanasdelv daivigsgfg gavaalrlge agietivler
       61 glawpitsaq dtfatyrkpd grstwlspkt imfepvpidi ytgvlerkde ygisvlcgag
      121 vgggslvyng vtyqpphklf yqslpraisy eemdkiyypr vrailqpsvi pedilassfy
      181 qsprvfmeqa sraglpnhll dialdwdivr qeingtkvas tiigeiwygi nsgskksldq
      241 nylpraeatg yvkilplhiv tliteapsns gyrfrvlsnq indsgevirr ksfacrylfm
      301 aagsmgtsal lvkskalgtl prlnsniglf wgdngdasgn rtgmppnnpg eggpavavie
      361 hydnpispta lvttpiwnap egtlpslsmg ippavgkfsy eaatdsvrlf wpseflevqk
      421 vkqaaeftys lldranttss sqpttmvtpg ltahplggav lgkacdfygr vlgyrglyvv
      481 dgaliagsag ctnpsftiaa laercmdkfl teiperrfqn tpiqvkrnl
//
LOCUS       WP_235148049             149 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: transposase [Fischerella].
ACCESSION   WP_235148049
VERSION     WP_235148049.1
KEYWORDS    RefSeq.
SOURCE      Fischerella
  ORGANISM  Fischerella
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae.
REFERENCE   1  (residues 1 to 149)
  AUTHORS   Davies,D.R., Mahnke Braam,L., Reznikoff,W.S. and Rayment,I.
  TITLE     The three-dimensional structure of a Tn5 transposase-related
            protein determined to 2.9-A resolution
  JOURNAL   J Biol Chem 274 (17), 11904-11913 (1999)
   PUBMED   10207011
REFERENCE   2  (residues 1 to 149)
  AUTHORS   DasSarma,S.
  TITLE     Identification and analysis of the gas vesicle gene cluster on an
            unstable plasmid of Halobacterium halobium
  JOURNAL   Experientia 49 (6-7), 482-486 (1993)
   PUBMED   8335077
REFERENCE   3  (residues 1 to 149)
  AUTHORS   Ferrante,A.A. and Lessie,T.G.
  TITLE     Nucleotide sequence of IS402 from Pseudomonas cepacia
  JOURNAL   Gene 102 (1), 143-144 (1991)
   PUBMED   1650732
REFERENCE   4  (residues 1 to 149)
  AUTHORS   De Meirsman,C., Van Soom,C., Verreth,C., Van Gool,A. and
            Vanderleyden,J.
  TITLE     Nucleotide sequence analysis of IS427 and its target sites in
            Agrobacterium tumefaciens T37
  JOURNAL   Plasmid 24 (3), 227-234 (1990)
   PUBMED   1963949
REFERENCE   5  (residues 1 to 149)
  AUTHORS   Sato,S., Nakada,Y. and Shiratsuchi,A.
  TITLE     IS421, a new insertion sequence in Escherichia coli
  JOURNAL   FEBS Lett 249 (1), 21-26 (1989)
   PUBMED   2542093
REFERENCE   6  (residues 1 to 149)
  AUTHORS   Kroger,M. and Hobom,G.
  TITLE     Structural analysis of insertion sequence IS5
  JOURNAL   Nature 297 (5862), 159-162 (1982)
   PUBMED   6281654
REFERENCE   7  (residues 1 to 149)
  AUTHORS   Klaer,R., Kuhn,S., Tillmann,E., Fritz,H.J. and Starlinger,P.
  TITLE     The sequence of IS4
  JOURNAL   Mol Gen Genet 181 (2), 169-175 (1981)
   PUBMED   6268937
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01609.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Fischerella"
                     /db_xref="taxon:1190"
     Protein         1..149
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=16972
     Region          <1..>149
                     /region_name="transpos_IS4_2"
                     /note="IS4 family transposase; NF033591"
                     /db_xref="CDD:468100"
ORIGIN      
        1 maeqkklirp llqlfkgyrm lvlgdrefhs iklanwlhsk gidfvlrqkq gtyirqenqs
       61 hqrlqslglt pgisffltgi qatkqkgfak fnlagyykrk yrgvvepagw flltnldnlp
      121 daikafklrs gieamfkdck tggynlest
//
LOCUS       WP_235147872              79 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: excisionase family protein [Enterobacter cloacae
            complex].
ACCESSION   WP_235147872
VERSION     WP_235147872.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter cloacae complex
  ORGANISM  Enterobacter cloacae complex
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter.
REFERENCE   1  (residues 1 to 79)
  AUTHORS   Liu,X., Li,Y., Guo,Y., Zeng,Z., Li,B., Wood,T.K., Cai,X. and
            Wang,X.
  TITLE     Physiological Function of Rac Prophage During Biofilm Formation and
            Regulation of Rac Excision in Escherichia coli K-12
  JOURNAL   Sci Rep 5, 16074 (2015)
   PUBMED   26530864
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018511.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06806.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Enterobacter cloacae complex"
                     /db_xref="taxon:354276"
     gene            1..79
                     /gene="xisR"
     Protein         1..79
                     /product="excisionase family protein"
                     /calculated_mol_wt=9244
     Region          1..69
                     /region_name="DUF1233"
                     /note="Putative excisionase (DUF1233); pfam06806"
                     /db_xref="CDD:399649"
ORIGIN      
        1 miqlvpnkwv teelltattg mskhmiqhar rstwmegkhy rhvapdmapk qnspimynrd
       61 einhwiehqs pakrrrisa
//
LOCUS       WP_235148095             516 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein [Enterobacter hormaechei].
ACCESSION   WP_235148095
VERSION     WP_235148095.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..516
                     /product="helicase-related protein"
                     /calculated_mol_wt=58423
     Region          <11..>263
                     /region_name="BRR2"
                     /note="Replicative superfamily II helicase [Replication,
                     recombination and repair]; COG1204"
                     /db_xref="CDD:440817"
ORIGIN      
        1 mlylivgagh fvldefykid lgnspdestr avdlslafhk laktgaqfym lgphiqkisg
       61 lddyeyhfip sdystvavdi qnfnlemrse erkekllelv ttldsptliy cqappsanrv
      121 aeyliqeagl kpvpetqeia awvskhyhpe wnvakalslg igihhggvpr alqqyivklf
      181 ndgiikriic tstmiegvnt saenviiydr rlntskfdyf tyknisgrag rmnkyfigkv
      241 fmleappleq gltveypigh qdenspigli mqleneyltd isrgrlqday anpilspstl
      301 ienrhvpier qvevaemiir dlpdgsklld wkgipetnql nylcelvysl eggnlmdygi
      361 ssslqlmwhi nelrtqknlp aylrdavenr reehtpseai nlrlkfirnm vcfrlprdim
      421 avsniqadvl akigiepgdf sffaeqlenm fldplltald eygiptqist qiknlilpse
      481 hlndllaklr alaprveslq ltgfekslms wavsem
//
LOCUS       WP_235148145             101 aa            linear   BCT 02-MAR-2025
DEFINITION  phage protein NinX family protein, partial [Enterobacter
            hormaechei].
ACCESSION   WP_235148145
VERSION     WP_235148145.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022224.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10765.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..>101
                     /product="phage protein NinX family protein"
     Region          2..101
                     /region_name="Phage_P22_NinX"
                     /note="Bacteriophage P22, NinX; cl11584"
                     /db_xref="CDD:448317"
ORIGIN      
        1 mdysklsdfe inkrvsicih pdiknwncyd vsgracfvin egtpkrvqyg fsftsdpada
       61 wqiitankis iyamseadkr ggwgaeafhp ndaysfndnp l
//
LOCUS       WP_235148191             398 aa            linear   BCT 02-MAR-2025
DEFINITION  FUSC family protein [Providencia rettgeri].
ACCESSION   WP_235148191
VERSION     WP_235148191.1
KEYWORDS    RefSeq.
SOURCE      Providencia rettgeri
  ORGANISM  Providencia rettgeri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Providencia.
REFERENCE   1  (residues 1 to 398)
  AUTHORS   Utsumi,R., Yagi,T., Katayama,S., Katsuragi,K., Tachibana,K.,
            Toyoda,H., Ouchi,S., Obata,K., Shibano,Y. and Noda,M.
  TITLE     Molecular cloning and characterization of the fusaric
            acid-resistance gene from Pseudomonas cepacia
  JOURNAL   Agric Biol Chem 55 (7), 1913-1918 (1991)
   PUBMED   1370369
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016513.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04632.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Providencia rettgeri"
                     /db_xref="taxon:587"
     Protein         1..398
                     /product="FUSC family protein"
                     /GO_component="GO:0005886 - plasma membrane [Evidence
                     IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=46179
     Region          <97..>269
                     /region_name="FUSC"
                     /note="Fusaric acid resistance protein family; pfam04632"
                     /db_xref="CDD:428044"
     Region          264..>354
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
ORIGIN      
        1 mtsyeeilet nrigwhyhrk qvakarqklm fqsqillhld kyqsiapfyf paqeptntqw
       61 khilslcpng vlktllvply yatfgtsikr inkidklklh qnkisawqaf arsfiaiavv
      121 gllwlwtqwq alayltlgms vmlalfasld yparfmrnif tgqlfgaiaa lictwylwpf
      181 assswqmtff iipviisgvv ifshnrlili afdyimvsli llqpsypftl sltqsignai
      241 aivsgplvam aafawvypts pkkryqqliy lseqqfkqgi taliqshkps ttqfihrlfs
      301 glllakkanf spspifdffi trqsiwlyll ilqkqfahha skkraliale kriqqnrfdl
      361 kkistlfrhl qrnesdneel eqlekyvkly mkkeycqk
//
LOCUS       WP_235148202             170 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Providencia rettgeri].
ACCESSION   WP_235148202
VERSION     WP_235148202.1
KEYWORDS    RefSeq.
SOURCE      Providencia rettgeri
  ORGANISM  Providencia rettgeri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Providencia.
REFERENCE   1  (residues 1 to 170)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 170)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Providencia rettgeri"
                     /db_xref="taxon:587"
     Protein         1..170
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=19839
     Region          <1..166
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
ORIGIN      
        1 mahlpcfkgq kwrwgiltfe vlwpeklapi shnndscviq ltdgyhkill tgdiekqgek
       61 slvemyknrl rstllfaphh gsstsstdll lrnvqpsmvv vssarysawk ipspkvyfry
      121 knsnikwlnt aedgqltlwf kkgkiqvsry ryeiqprwyh lwfglplfpe
//
LOCUS       WP_235148241             854 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase family protein [Helicobacter pylori].
ACCESSION   WP_235148241
VERSION     WP_235148241.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter pylori
  ORGANISM  Helicobacter pylori
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04851.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..854
                     /organism="Helicobacter pylori"
                     /db_xref="taxon:210"
     Protein         1..854
                     /product="DEAD/DEAH box helicase family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=99939
     Region          36..845
                     /region_name="ResIII"
                     /note="Type III restriction endonuclease [Defense
                     mechanisms]; COG3421"
                     /db_xref="CDD:442647"
ORIGIN      
        1 mkgfyarfih sklpppqsai kdhaqnnapn tpnngeielp thitsnlkne lrnyqkqaih
       61 nylekrqsnp fqkhfmfema tgsgktlvma glilecykqg yqnfiffvns tsilektkln
      121 fidsvsskyl fsenitinde nteiksinnl nesqtsaini yfstiqglfs lftkakenti
      181 siedlkdqkl vfladeahhl ntetkkklsn aessekhnwe svvklaleqn kdnlllefsa
      241 tipkeksved kyknlkvity tlkefsedkf ckniyslsye nkeletrflg acvsslykel
      301 laqhhnienf kpcilfkser iedskenqer fnaflenlsp ldlenffnhs rnaffkdakn
      361 ffdkqhytpn laallqtkfk ksvqintnne keleksmlll nsledrqnpk rvifsvdkln
      421 egwdvlnlfd ivrlknkanq kdttkdaqli grgaryypfs yndlkpsqie fyqrkfdlfn
      481 plsalerldy haiydsefia klkkelqdlg lgfvnekqti pltptknlkc yyasntknkn
      541 knlfnkdytd svkvklqslh vplfafgvre kkvdfkeenk gdttyyipht ldeiplnyfl
      601 kalnlknldf ktlkkafkkh afnnkvgfie ryisplktnf hknqkfddnk illklavyii
      661 enlkdtllke qdkydvsale lkefethnks lsaselekdi pfyewllfkd mrkldsdler
      721 gfldfinnhk evldkkfkew cvlrndrfte lkvfcniens pyyaqgfepd filfaqthsd
      781 eflgftcyie akgehlepsn awkeefleml enatlkshnk kldlkglpff tlhnkvlkse
      841 fatafhqifk dqec
//
LOCUS       WP_235147472              79 aa            linear   BCT 02-MAR-2025
DEFINITION  RusA family crossover junction endodeoxyribonuclease, partial
            [Escherichia coli].
ACCESSION   WP_235147472
VERSION     WP_235147472.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 79)
  AUTHORS   Mahdi,A.A., Sharples,G.J., Mandal,T.N. and Lloyd,R.G.
  TITLE     Holliday junction resolvases encoded by homologous rusA genes in
            Escherichia coli K-12 and phage 82
  JOURNAL   J Mol Biol 257 (3), 561-573 (1996)
   PUBMED   8648624
REFERENCE   2  (residues 1 to 79)
  AUTHORS   Sharples,G.J., Chan,S.N., Mahdi,A.A., Whitby,M.C. and Lloyd,R.G.
  TITLE     Processing of intermediates in recombination and DNA repair:
            identification of a new endonuclease that specifically cleaves
            Holliday junctions
  JOURNAL   EMBO J 13 (24), 6133-6142 (1994)
   PUBMED   7813450
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017663.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05866.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>79
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /EC_number="3.1.21.10"
                     /GO_function="GO:0000287 - magnesium ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006281 - DNA repair [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
     Region          1..>79
                     /region_name="RusA"
                     /note="Endodeoxyribonuclease RusA; cl01885"
                     /db_xref="CDD:470382"
ORIGIN      
        1 mntyhitlpw ppsnnryyrh nrgrthvsae gqayrdnvar iiknamldig lampvkirie
       61 chmpdrrrrd ldnlqkaaf
//
LOCUS       WP_235148275             140 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Dyadobacter sp. CY345].
ACCESSION   WP_235148275
VERSION     WP_235148275.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 140)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..140
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=15984
     Region          6..131
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(107..110,112)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 mnndgpiivi eddledqfli getfknlayt npvlffedgv kalnylnetd akpllilsdi
       61 nlpringmev rdqvkqndqi dvkcipylff ttspnhkivv daycssvqgf fqkpasfqdf
      121 ektiqiivdy wkvcirpdec
//
LOCUS       WP_235148379             705 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxy terminal-processing peptidase [Dyadobacter sp. CY345].
ACCESSION   WP_235148379
VERSION     WP_235148379.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023246.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11818.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..705
                     /product="carboxy terminal-processing peptidase"
                     /EC_number="3.4.21.102"
                     /calculated_mol_wt=79507
     Region          50..696
                     /region_name="PRK11186"
                     /note="carboxy terminal-processing peptidase"
                     /db_xref="CDD:236873"
ORIGIN      
        1 mkkylitlip vvllgwqrgp vqqnaivtte tslaedikpt vaqykaeels trilsnyhyr
       61 kiklndslss aifdkyidgi dhgrlyflas dmaefekyry sfddflqkre ldvpfnmynl
      121 frkryqerse yiqtllktpk pfdytvdesl ntdrekvawa ksndelndtw rkylkseald
      181 lklagkadss vvktmsdryk nrdrglsrir teqvfqmfmn ayaesmdpht symaptsadr
      241 fkqemsqsve gigallreed nyikivevip ggpafkgkql kkedkiigva qgddgkfvdl
      301 vgwfvddavk likgtkgtvv rlqilsadal sstppkeirl vrekikleds rakkeivsvn
      361 tgnkdykigv idiplfyrdf egaqqkekef ssttrdvqkl iaelqaesvd gividlrnng
      421 ggslteavsl tglfinkgpv vqvkegqgei qvetdndpmi ayngpmavmv nrfsasasei
      481 faaaiqdykr giivgeqtyg kgtvqtlidl nqwapketdq lgqvkltvak fyringsstq
      541 lkgvvpdmel psafkvneyg egsqpsalpw dqiasskyes anninekivg qlrdkykqrl
      601 ksdeelktlv ktlddfkkar enkmvslqet krkverdeae kkraamkqlg edaeeededa
      661 dpkvateapk dvkkkkdiyi tetgriladl ivaskepsla gakkk
//
LOCUS       WP_235148398             179 aa            linear   BCT 02-MAR-2025
DEFINITION  5' nucleotidase, NT5C type [Dyadobacter sp. CY345].
ACCESSION   WP_235148398
VERSION     WP_235148398.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 179)
  AUTHORS   Rampazzo,C., Kost-Alimova,M., Ruzzenente,B., Dumanski,J.P. and
            Bianchi,V.
  TITLE     Mouse cytosolic and mitochondrial deoxyribonucleotidases: cDNA
            cloning of the mitochondrial enzyme, gene structures, chromosomal
            mapping and comparison with the human orthologs
  JOURNAL   Gene 294 (1-2), 109-117 (2002)
   PUBMED   12234672
REFERENCE   2  (residues 1 to 179)
  AUTHORS   Rampazzo,C., Johansson,M., Gallinaro,L., Ferraro,P., Hellman,U.,
            Karlsson,A., Reichard,P. and Bianchi,V.
  TITLE     Mammalian 5'(3')-deoxyribonucleotidase, cDNA cloning, and
            overexpression of the enzyme in Escherichia coli and mammalian
            cells
  JOURNAL   J Biol Chem 275 (8), 5409-5415 (2000)
   PUBMED   10681516
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018627.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06941.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..179
                     /product="5' nucleotidase, NT5C type"
                     /GO_function="GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009264 - deoxyribonucleotide catabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=20519
     Region          1..172
                     /region_name="YorC"
                     /note="5'(3')-deoxyribonucleotidase [Nucleotide transport
                     and metabolism]; COG4502"
                     /db_xref="CDD:443586"
ORIGIN      
        1 mkktvaidmd nviadietnw inlyeqefgv rvdkkdllgk pedfafpdpd karsllykpg
       61 ffrnapiieg avealkeiqk dfeiyivsaa mefpnsllek hdwlaehfsf iswkniifcg
      121 dksvigtdfl iddhlknldf hkgmpilfta ghninvtkht rvnnwieavk llrenievv
//
LOCUS       WP_235148430             416 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Dyadobacter sp. CY345].
ACCESSION   WP_235148430
VERSION     WP_235148430.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..416
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44764
     Region          21..406
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(31..32,35..36,39,78,128..129,131..133,136,156,
                     159..160,233,236..237,240..242,245,276,280,335..336,340,
                     356,359..360,363..364,367)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 metlelqkak shvlsrnwia fglcmvsyil sgtvstlmsv ylpvaipdll krnvseaelg
       61 eigayvnatf lygwmlggll fglisdkigr vktlalatal sglgtclvvi vpdwyilmgl
      121 rfltgmgvgg vllvstvyis eiwekrtrpv mlgilavsfp igivatgsln ilfaewrpaf
      181 glgiipivia vlilltlkes tswqltrtqv sqkpesifdk tnrpnliags vifgsvligl
      241 wgifswlptw vqtllaaged gqkqrgltmv llglggitgg ilsgflirnf gsrkilmmtf
      301 sgcivmcgil fitnhtfntv iygeiaalal ffgisqgals syipelfpvv iratatgfcf
      361 nigrfftata vffigalvai lggfgnalmv fsipflialt aawfsrdtdt niknls
//
LOCUS       WP_235148493             741 aa            linear   BCT 02-MAR-2025
DEFINITION  LysM peptidoglycan-binding domain-containing protein [Dyadobacter
            sp. CY345].
ACCESSION   WP_235148493
VERSION     WP_235148493.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 741)
  AUTHORS   Bateman,A. and Bycroft,M.
  TITLE     The structure of a LysM domain from E. coli membrane-bound lytic
            murein transglycosylase D (MltD)
  JOURNAL   J Mol Biol 299 (4), 1113-1119 (2000)
   PUBMED   10843862
REFERENCE   2  (residues 1 to 741)
  AUTHORS   Joris,B., Englebert,S., Chu,C.P., Kariyama,R., Daneo-Moore,L.,
            Shockman,G.D. and Ghuysen,J.M.
  TITLE     Modular design of the Enterococcus hirae muramidase-2 and
            Streptococcus faecalis autolysin
  JOURNAL   FEMS Microbiol Lett 70 (3), 257-264 (1992)
   PUBMED   1352512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01476.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..741
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=81441
     Region          53..433
                     /region_name="mltD"
                     /note="membrane-bound lytic murein transglycosylase D;
                     Provisional; PRK10783"
                     /db_xref="CDD:182727"
     Region          85..209
                     /region_name="MltD-like"
                     /note="Membrane-bound lytic murein transglycosylase D and
                     similar proteins; cd16894"
                     /db_xref="CDD:381615"
     Site            order(101,119..121,124,152,170..171)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:381615"
     Region          <395..>540
                     /region_name="PRK13914"
                     /note="invasion associated endopeptidase"
                     /db_xref="CDD:237555"
     Region          <588..740
                     /region_name="PRK06347"
                     /note="1,4-beta-N-acetylmuramoylhydrolase"
                     /db_xref="CDD:180536"
     Region          <679..741
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
ORIGIN      
        1 mnripsayfk lttlillifv qvnlakaqtp eippsvlfgg itvkfdrnaq nlieedirsl
       61 msnkkfweek ldrailyfpi vesilmdeev pidfkylavq essfkpdvvs ssnavgfwqf
      121 kpetaielnl rvdkdvderk nisssthaaa wylkknnqql nnwvsalysy yqgvggvrkl
      181 vpanwayare vvltgktdry mlrffahkia leagldryrs annmvliese ygkgktfaei
      241 akyleisegd lksynrwvsd nkiptdreyl ltvpvatnqv afvrsklslp eqtettqttp
      301 tlastsstsd atgfpslkks gapsndkggy sffeinglpg iearagdtdk slasagklrt
      361 akfrrfndlt admpvipgni yylakknkka atpfhtaktg dswqsisqqy glrlvnllky
      421 nrtisktypi qtgqvvwlnk krpknqpvei ikqkpeeqvt epaiasapsk tqpsatndip
      481 anaagrkkyt pvlvdkness iakenqafqp gvtpaapats apaktvevpv vaskpstntn
      541 drvviitqdg ndgsfkpade pkeptarpaa kpaqkpvarr sadadlfstp senasrtpan
      601 tqpvafdnpl ppvkekpavt saresnvfht veqgqtfysi srmnnltvke llalnnlndv
      661 vklsvgqkli vkkasgvaat sksgaevers antsgprtht vaagetlfri sqnyqvsvee
      721 iqklnklsgn tvkvgqklki p
//
LOCUS       WP_235148525             485 aa            linear   BCT 02-MAR-2025
DEFINITION  SusD/RagB family nutrient-binding outer membrane lipoprotein
            [Dyadobacter sp. CY345].
ACCESSION   WP_235148525
VERSION     WP_235148525.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 485)
  AUTHORS   Koropatkin,N., Martens,E.C., Gordon,J.I. and Smith,T.J.
  TITLE     Structure of a SusD homologue, BT1043, involved in mucin O-glycan
            utilization in a prominent human gut symbiont
  JOURNAL   Biochemistry 48 (7), 1532-1542 (2009)
   PUBMED   19191477
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024181.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12771.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..485
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /calculated_mol_wt=51864
     Region          33..458
                     /region_name="SusD-like_2"
                     /note="Starch-binding associating with outer membrane;
                     pfam12771"
                     /db_xref="CDD:463695"
ORIGIN      
        1 mkrakliraa glflmagmls cesmvdnlnt dlnnptdasa nliltgaqlg nisvqeghla
       61 rvaamwsgyf tgtdrqykdi ysynvtgasf ndvwkftyqg vveqtklvie kseatnnrlv
      121 qgiakvvqan algtaaacfg dipfseasdi tnfpnpafep qiqvygklqt lldeaiadle
      181 sglgtspgaa dihfagdatk wkdaaytlks rfyletkeya laataaekgi ssaarslvmt
      241 hgttlnvnen lmyafiarsr vgdinaslal aptllnpasa tykgntktde tarfnhhfit
      301 vsttgvvipv spntnssats rglfgqsapy platysenvl tsaealartt gfaaglakln
      361 vyraylntgg dldatyktgt fkykyepyta edfasggmln ttgltadqal lkeilmeryi
      421 tfngqiigfn dlrrtrsetv gvkltpsaga tlpermlyse aevnsntsap npvpgvfvkt
      481 avnak
//
LOCUS       WP_235148532             517 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Dyadobacter sp. CY345].
ACCESSION   WP_235148532
VERSION     WP_235148532.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 517)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..517
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=57051
     Region          49..515
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mffklnkksk tvvamllvfa aaasaplsaq kipaeksdal iakamypale elkdyvaipn
       61 daliaediek nlvwsekafa krgfktailk tgkmplfsae ktypkntkiv lfyfhldgqa
      121 vrpnewfqkd pymtvlkeks adgtfkeidw ellkkekind ewrifarsts ddkgpivmll
      181 qaldilagqn qqppfnvkvv ldceeekgsp glkaslaqyk kelmadyliv mdgpmhssni
      241 ptltfgcrgg tgfglttyga itqqhsghfg nyspdptfil skiiatmkdd dgrvlidgfy
      301 dgikfdaeae kimaavpdnm keindrlqia ekekvgknyq esmqypslni rglkaavvgk
      361 gggsiipeea laefgirlvp etegtrmtnl vkahiekqgy kvfdhvptkq ermankklvf
      421 msgggagspa frtevnspig nwlrksvtdn fkqdpiviri mggsvpvvpf iqtlgvpavi
      481 vplvnmdnnq hspnenlrlg nlrmgiktcl silttpi
//
LOCUS       WP_235148537             988 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235148537
VERSION     WP_235148537.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 988)
  AUTHORS   Gao,G., Nara,T., Nakajima-Shimada,J. and Aoki,T.
  TITLE     Novel organization and sequences of five genes encoding all six
            enzymes for de novo pyrimidine biosynthesis in Trypanosoma cruzi
  JOURNAL   J Mol Biol 285 (1), 149-161 (1999)
   PUBMED   9878395
REFERENCE   2  (residues 1 to 988)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
REFERENCE   3  (residues 1 to 988)
  AUTHORS   Nygaard,P., Duckert,P. and Saxild,H.H.
  TITLE     Role of adenine deaminase in purine salvage and nitrogen metabolism
            and characterization of the ade gene in Bacillus subtilis
  JOURNAL   J Bacteriol 178 (3), 846-853 (1996)
   PUBMED   8550522
REFERENCE   4  (residues 1 to 988)
  AUTHORS   Lollier,M., Jaquet,L., Nedeva,T., Lacroute,F., Potier,S. and
            Souciet,J.L.
  TITLE     As in Saccharomyces cerevisiae, aspartate transcarbamoylase is
            assembled on a multifunctional protein including a
            dihydroorotase-like cryptic domain in Schizosaccharomyces pombe
  JOURNAL   Curr Genet 28 (2), 138-149 (1995)
   PUBMED   8590465
REFERENCE   5  (residues 1 to 988)
  AUTHORS   Jabri,E., Carr,M.B., Hausinger,R.P. and Karplus,P.A.
  TITLE     The crystal structure of urease from Klebsiella aerogenes
  JOURNAL   Science 268 (5213), 998-1004 (1995)
   PUBMED   7754395
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01979.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..988
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=109261
     Region          57..>471
                     /region_name="COG4946"
                     /note="Uncharacterized N-terminal domain of tricorn
                     protease, contains WD40 repeats [Function unknown]"
                     /db_xref="CDD:443973"
     Region          81..121
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          164..202
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          254..310
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          317..340
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <507..>566
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
     Region          592..977
                     /region_name="HutI"
                     /note="Imidazolonepropionase or related amidohydrolase
                     [Secondary metabolites biosynthesis, transport and
                     catabolism]; COG1228"
                     /db_xref="CDD:440841"
ORIGIN      
        1 mnkkfkllii fislislfel kamtsdsvkv iltegtnmai alspdkknla mdiqgtiwlm
       61 pvaggkakal tdalgdcrqp twsadgnqia fqsyrdgnfh iwkvnkdgtg ltqltfgvyh
      121 drephwspng keivfssdrs gnydiwkiel ekgilaqltk dtgndyfpsy ssdgsklayv
      181 serntaagly llegnsepkl lvhskeklfs pvwhpngkqv tfntllpgas qlefvsvggg
      241 dwqtlsekte dvfpfkvswl setdylytsd gqikhgilgq kktasipfqa evildrkkyv
      301 tkardfdskk aqpvqgirsp ivspdgksvi ftalgdlwif kkgtekpaqv tndifidvdp
      361 vwspdgkkva ytsdkngnmd lyikdlltgk dtclldapdn lkfpswspdg skiafyqadp
      421 kaysrnvlni ldlksgeiit aygslfegsq pgwtpdgkfi vissldsyst rfreglskfl
      481 iipldkspak fispvpersl atrgkngpvv spdgnmiayi ldntlwvvpv dkecniigpp
      541 krltnelaed pswtadskti vflatdvlke vsvidgkvep inmnftwqvk qpsgqlviha
      601 gklfngrsek ylenvdvlie gnrikkitph raaaygnakv idaskqviip glfemhthqn
      661 aqlgekggrl wlaygitsir epgtdpydal erkeswtsgk rlgprtfftg ghmegnriyy
      721 nrntsnvgga qldmelnrav klgydmikty vglpdnlqkr vtefahtngi pvasheiypa
      781 vgygvdgveh mgatsrrgys pkltamnnty qdvvqlitks gmyitptisl hggftslakn
      841 dpeffnhwqf ksfyseklka ellgsvtrms estysnvekt tlnlirsgar vtpgtdspii
      901 psgfsyhael qswvkagisp fetlraatlw caqeigvekd lgtietgkla divivdgdpl
      961 tnikdllnvq gvikngeyln vkdlkren
//
LOCUS       WP_235148556             152 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1569 domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235148556
VERSION     WP_235148556.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019238.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07606.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..152
                     /product="DUF1569 domain-containing protein"
                     /calculated_mol_wt=17736
ORIGIN      
        1 mplpdifcka vsrevinrie kldsqrqplw gkmnaaqmla hccvsyeyvy edkhkppglv
       61 mklilkmfvk nqvvsekpys kntrtapdfi isderdfqne kqrligyilk tqelgkmhfk
      121 gkeshsfgkl sctewnnmfy khldhhltqf gv
//
LOCUS       WP_235148590             475 aa            linear   BCT 02-MAR-2025
DEFINITION  SusD/RagB family nutrient-binding outer membrane lipoprotein
            [Dyadobacter sp. CY345].
ACCESSION   WP_235148590
VERSION     WP_235148590.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 475)
  AUTHORS   Koropatkin,N., Martens,E.C., Gordon,J.I. and Smith,T.J.
  TITLE     Structure of a SusD homologue, BT1043, involved in mucin O-glycan
            utilization in a prominent human gut symbiont
  JOURNAL   Biochemistry 48 (7), 1532-1542 (2009)
   PUBMED   19191477
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024181.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12771.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..475
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /calculated_mol_wt=52059
     Region          35..451
                     /region_name="SusD-like_2"
                     /note="Starch-binding associating with outer membrane;
                     pfam12771"
                     /db_xref="CDD:463695"
ORIGIN      
        1 mknifskkig ialltmqfli sceqsfdqpd iqsnpnavtd vniptllagt mlgvsmlhed
       61 tdvriasmwa gelaglsrah qgfgqyivss qsfswnvlyp vasqarliqv kadavgdkwt
      121 kgvgqvleal viakatslyg dvpysqafde tnfptpvfdk qadvykalqv tldngilnls
      181 apaglaftqq dflykgdvnk wkaaantlka rlylhtaeyd naiasaakgi ktqtadmlip
      241 hgtslgvdqn qnydffrvnr agdtgfdgay lpklmqsria spnsktdeta lynhyfktgi
      301 vatgsldant tdgafmanaf hpiltyyene liiaeaqark nvtnealisl navrvalasg
      361 yfhgatlpta grkyepysls dfaatgianp trkatiqeam lyeiiaqryi iflmqyeafn
      421 dyrrlakaip vvqlpiplyv gnrkpqrfiy pqseiatnpn vpaplpdqft nvpif
//
LOCUS       WP_235148613             352 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Dyadobacter sp. CY345].
ACCESSION   WP_235148613
VERSION     WP_235148613.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..352
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=39589
     Region          2..338
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mnillvsgpg islkepfnsg ieafivsfan qlvdeghavd vvadeaeesa kfmlvnpfae
       61 sssektnffk rfkekrqfkn lnvdsydvih ynmfyphlln egfhfnktsf ltlhspadsk
      121 risaykklsk qgdltfvais ervklqydqa ldmdiplinn ginmnlwptk sssdreyllw
      181 sarineeknv aaaisvakhm qlplkiagri vdqhyfdeqv kphlnnqiqy ighvtqreln
      241 slakkasayl atatwqepfg lavlemlasg vpvvgfntav ppdwehesvl ttaslrwqdl
      301 vdlvkmssdi rpdtcknfas nmniqnmtan yvklyrkvll kegigkeais ai
//
LOCUS       WP_235148625             683 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6402 family protein [Helicobacter fennelliae].
ACCESSION   WP_235148625
VERSION     WP_235148625.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter fennelliae
  ORGANISM  Helicobacter fennelliae
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 683)
  AUTHORS   Zhou,Q., Grundmann,F., Kaiser,M., Schiell,M., Gaudriault,S.,
            Batzer,A., Kurz,M. and Bode,H.B.
  TITLE     Structure and biosynthesis of xenoamicins from entomopathogenic
            Xenorhabdus
  JOURNAL   Chemistry 19 (49), 16772-16779 (2013)
   PUBMED   24203528
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039427.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19940.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Helicobacter fennelliae"
                     /db_xref="taxon:215"
     Protein         1..683
                     /product="DUF6402 family protein"
                     /calculated_mol_wt=80962
     Region          <443..652
                     /region_name="DUF6402"
                     /note="Family of unknown function (DUF6402); pfam19940"
                     /db_xref="CDD:437772"
ORIGIN      
        1 melflfkmgs ksrflaktde kgladfkisg lnkfqlylvy lneqsnykit pmydrflisy
       61 naideiqelr fykytdvfrv nlyskigryc fqkedivnfk ayypeyiqee dikwaytfis
      121 knlalkdilq dkkltqgdee elkqypakcl nnakyytlkd knnqaylgke vkdyeinnii
      181 ndskmivfay tkeplenvya eiilgdiiqi sidcsmqeal nakdevsklg wttsyvlqrl
      241 whdnpkdatk iselkyknti elcqsiedek mksliyqyal dielkpfeik qvlkpkidpc
      301 nfyveldwee fylqfplvke rskelldiss pflsyfnfnp hlsdnvkthi iqklfnqqrl
      361 crnnpkencl ddtgisntkq dlkyysqlkn iadieeldli vhteniknak teteltfsvy
      421 pkdkflsihd eykridtlrp ydidkatmqq gvgisdedfg wklassdeqt saqalslyac
      481 tgkfsvyyip skfllkkehn ktyvyikely ayiwdtfdfd deehkykkde eakdeniiel
      541 gqpvgtwnyk emrfdfnhsv rqmakytnnt fkwnelnsyv ksggarvfsd vknfkenwkk
      601 flegniseid ivmdideipt lkqnqiyply nqdyqnykkt fnkglnfrvf skdktndkih
      661 kgfyilkvpe dkatqtyfkv ell
//
LOCUS       WP_235148714             570 aa            linear   BCT 02-MAR-2025
DEFINITION  GMC oxidoreductase [Dyadobacter sp. CY345].
ACCESSION   WP_235148714
VERSION     WP_235148714.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05199.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..570
                     /product="GMC oxidoreductase"
                     /GO_function="GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /calculated_mol_wt=64274
     Region          13..560
                     /region_name="BetA"
                     /note="Choline dehydrogenase or related flavoprotein
                     [Lipid transport and metabolism, General function
                     prediction only]; COG2303"
                     /db_xref="CDD:441878"
ORIGIN      
        1 manfnidsek artydaivig sgisggwsak elterglktl vlergrdvqh ikdypttnmq
       61 pwefdhrerl pkavtdanpi asrcynfkes sqhffvkdne hpyiqekpfd wlrgyqvggk
      121 sllwarqtqr wsqfdfdgpa rdkfavewpi gyndiapwys hvekfagitg nkdgidtlpd
      181 geflkphdln cvekyfketv akqykdrhii igraahltdp kqihldqgra qcqhraicer
      241 gcpfggyfss nastipwamk tgnmtlrphs vvhsviyddk kqkvtgvrvi dantkemmef
      301 yaniifvnaa alntnlilmn sissrfpngl gndsgvlgky vafhnyrasv sgeyegflds
      361 ttdgkrpnsg yiprfrnvyk qetdflrgya agfganrmty sdrgdigesl kaslldtkyg
      421 nwsvgshmmg etipkessyv aldkelkday gmpllkinvg yddndekmik dyieqvtemf
      481 tnagfknirs hdghrnpgnd ihemggarmg kdpktsvlnk wnqmhaaknv fvtdgasmts
      541 tstqnpslty mafsarsvdy avkqmkaknl
//
LOCUS       WP_235148811             210 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Dyadobacter sp. CY345].
ACCESSION   WP_235148811
VERSION     WP_235148811.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 210)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..210
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=23534
     Region          4..202
                     /region_name="PRK15369"
                     /note="two component system response regulator"
                     /db_xref="CDD:185267"
ORIGIN      
        1 mkhiliaedh avvrigtkhl lkslipesqi tgvdtfqkvl lelgsqnfdl lildinipgg
       61 nntkmietir ikrpeirilm fssydeqlyg llylqagadg ylskdaaede fktavlsvld
      121 nkkymsadmq qininrlinp keflpdpivs lsprekdvmn llkegfgtak iaeklslqls
      181 tvstykarif ekmgvknive litkiklids
//
LOCUS       WP_235148882             308 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase [Dyadobacter sp. CY345].
ACCESSION   WP_235148882
VERSION     WP_235148882.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 308)
  AUTHORS   Urbach,C., Evrard,C., Pudzaitis,V., Fastrez,J., Soumillion,P. and
            Declercq,J.P.
  TITLE     Structure of PBP-A from Thermosynechococcus elongatus, a
            penicillin-binding protein closely related to class A
            beta-lactamases
  JOURNAL   J Mol Biol 386 (1), 109-120 (2009)
   PUBMED   19100272
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024748.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13354.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..308
                     /product="serine hydrolase"
                     /GO_function="GO:0008800 - beta-lactamase activity
                     [Evidence IEA]"
                     /GO_process="GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=34710
     Region          21..292
                     /region_name="PenP"
                     /note="Beta-lactamase class A [Defense mechanisms];
                     COG2367"
                     /db_xref="CDD:441934"
ORIGIN      
        1 mkkliiitll clnaqifaqp fsnsshktdr qlvaklekat agfkgnvgvy vrnlktnkta
       61 svnqdsifpt asmvkipimv glfdkiqkge ikfdqtliyr dslkyddgiv gslkdstkip
      121 mpkvvhlmis lsdntgslwl qalagggaai nqwmdnngfe ytrvnsrtpg rkqaqatygw
      181 gqttpremae lmvmiregka isadasermy rylgmqfwdg ealsqipsni ktsaksgavn
      241 qaksevvmvh aphgdyvfci ttknqlderw ersnegyvli rkvseiiwnh fepkskwkpv
      301 enyekwwf
//
LOCUS       WP_235148884             672 aa            linear   BCT 02-MAR-2025
DEFINITION  T9SS type A sorting domain-containing protein [Dyadobacter sp.
            CY345].
ACCESSION   WP_235148884
VERSION     WP_235148884.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 672)
  AUTHORS   Veith,P.D., Nor Muhammad,N.A., Dashper,S.G., Likic,V.A.,
            Gorasia,D.G., Chen,D., Byrne,S.J., Catmull,D.V. and Reynolds,E.C.
  TITLE     Protein substrates of a novel secretion system are numerous in the
            Bacteroidetes phylum and have in common a cleavable C-terminal
            secretion signal, extensive post-translational modification, and
            cell-surface attachment
  JOURNAL   J Proteome Res 12 (10), 4449-4461 (2013)
   PUBMED   24007199
REFERENCE   2  (residues 1 to 672)
  AUTHORS   Glew,M.D., Veith,P.D., Peng,B., Chen,Y.Y., Gorasia,D.G., Yang,Q.,
            Slakeski,N., Chen,D., Moore,C., Crawford,S. and Reynolds,E.C.
  TITLE     PG0026 is the C-terminal signal peptidase of a novel secretion
            system of Porphyromonas gingivalis
  JOURNAL   J Biol Chem 287 (29), 24605-24617 (2012)
   PUBMED   22593568
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039201.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18962.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..672
                     /product="T9SS type A sorting domain-containing protein"
                     /GO_component="GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /calculated_mol_wt=72173
     Region          43..164
                     /region_name="NTTRR-F1"
                     /note="NTTRR-F1 domain; NF033675"
                     /db_xref="CDD:468135"
     Region          602..666
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mktfkniaal cmallctsga ssfankavtn ahapttdncn cdnnvlknps fedsktfdgw
       61 kgdgewqvst tydvcgnrav aldgkgkiyq dvpvapgtkv dfsvyggvhv nkdqefrllf
      121 ynssneslag adgenidftv gngsslrkyf lsavapagta yarvearsvk ggdwikmdga
      181 cvqltipapv cctvnklsng sfeeyklvgd rkvpkdwnys nnsnfswdga favcgkqsgl
      241 ltgagsfwqd vaitagssat lsiwggyhek nsqvfklqfv lsngdvvegd skaltksvsd
      301 lpktsnvglt qydlsaiaps gakyvrvfgs sngnylkvda acltisvpvc etcndnkmtd
      361 psfeagtsew tkaggtfets ndyvvcgtks gkltgkstls leksadpaat vtfsiyagvs
      421 svngqklrlr flnadrgeis sketpvtkiy sapavglqkf tvserapqnt rfvsvelvsn
      481 getfifdlgc lsiaggtplp vtltefgvkk egisaslvwk ttmetnskef evqhssngkq
      541 weilgvvaaq gessvtksyn flhttpangn nlyrlrmidq dltfaysriv nenfvteesa
      601 vlypnpssnf mklktvekia siqiydvkgi kvkdfspsgt didisslaqg tyivtfkqts
      661 glvtkqriqv vr
//
LOCUS       WP_235148919             873 aa            linear   BCT 02-MAR-2025
DEFINITION  M1 family aminopeptidase [Dyadobacter sp. CY345].
ACCESSION   WP_235148919
VERSION     WP_235148919.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 873)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01433.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..873
                     /product="M1 family aminopeptidase"
                     /GO_function="GO:0008237 - metallopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=99628
     Region          56..673
                     /region_name="PepN"
                     /note="Aminopeptidase N, contains DUF3458 domain [Amino
                     acid transport and metabolism]; COG0308"
                     /db_xref="CDD:440077"
     Region          633..>734
                     /region_name="HEAT"
                     /note="HEAT repeat [General function prediction only];
                     COG1413"
                     /db_xref="CDD:441023"
     Region          650..674
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          681..712
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
ORIGIN      
        1 mskpqagmtg kkmnvsmrng fckffgiall faafsvdakd hhsqidtlyr rnpgviskqg
       61 pyrpartlkh dlihtrldve fdwlrqqvhg savisfkphf ypqntielda kgfdikgisq
      121 ldtlhdfgsa stkditkrtl kkldytydkr kitiklgkey tskdtlyiki dyvakpndlp
      181 rdqpddnpnd kglyfinadg qeegkpkqiw tqgetagssc wfptidspnv kftqdvyitv
      241 dstyktlsng llisqepdqs gqrtdhwkqt iphapylaml avgdyaiatd mmpnglelsy
      301 yvepkyggda haifgrtpem maffsnifgv eypwekyaqi vvrdfvagam enttatvhee
      361 gvqtdarsil dgnsdaviah elahhwfgdy vtaeewgqlp lnesfanyse ylwseyyigk
      421 neadwqnlqe lkqylteaet kqvpliryfy kdaenmfdsh syakggrilh mlrkyvgdea
      481 ffkslqnylk thalgtaein dlrmsfekvt gedlnwffdq wflrpghpil kikqdystat
      541 nkvqlkvtqa qdtlattvyr lplkvdvwtg gkrnrydvvi dkvnqtlefp sakkpdlvif
      601 daesqllani eqdkdrpelv yqynhsqqfl pkyealaale gklqdstarn vlikamtdpf
      661 wklrqmaisn faeydgegfa diekiiqsra rsdrhpqvra eaiitlasfg dnnndpvfre
      721 alsdssyqvv svaldkylvg qpadandvaa qfedspndai vtsvgnyyag laqperydwf
      781 lekmkrmkps ekynflqvfg kylikskqdv qrqsipvleg marnspsyfv rfgayqalgl
      841 ltdiqgvpai rkdirakete pklkemytqf gef
//
LOCUS       WP_235148956             313 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Dyadobacter sp. CY345].
ACCESSION   WP_235148956
VERSION     WP_235148956.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 313)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..313
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=34344
     Region          35..297
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mkylfstlfl fsiinvsaqt ispspeiisk hiyklasdkm kgrgtggken akaasyveke
       61 fkkyklkplg tdgfrqefia kvrrvvvpds lrktqnvigf ldngaeftiv igahfdhlgl
      121 gnqgsskddh pegkihngad dnasgvagll elaryfsgnd tkepynflfi afgaeelgll
      181 gskhfvnnpt lplskisfmc nmdmigrynp drgvgiggfg tsdqwpeifk pvksdikfft
      241 daagsggsdh gsfyakqipv lffhtgghdd yhkptddaek vdfkaeagil niefqiiqsa
      301 mmlpklkfte vkn
//
LOCUS       WP_235148607             342 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Dyadobacter sp. CY345].
ACCESSION   WP_235148607
VERSION     WP_235148607.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 342)
  AUTHORS   Mengin-Lecreulx,D., Texier,L., Rousseau,M. and van Heijenoort,J.
  TITLE     The murG gene of Escherichia coli codes for the
            UDP-N-acetylglucosamine: N-acetylmuramyl-(pentapeptide)
            pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
            involved in the membrane steps of peptidoglycan synthesis
  JOURNAL   J Bacteriol 173 (15), 4625-4636 (1991)
   PUBMED   1649817
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016027.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04101.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..342
                     /product="glycosyltransferase"
                     /GO_function="GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=38409
     Region          16..306
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mmkpaifyfv hahgnghrat fnmlypalsv ffeviavttn neitrylhkk hdvqvlelpp
       61 kypvdyeipe htfskafevt pyavepagra kalaeaiacy kpkafycdgv pelaimvrgm
      121 gvpvvlvhlp gnvmndptqv faheladhiv ahfpstleqa nyrfasktyy sgylsqyawe
      181 vfnpnnlsdi dnvtiilgyd nideavlkni tqdqniqfti ignkrnydln knckllgpvk
      241 direaivgev visaagqnti aellslnkrl illpeprpyd eqvvhanvlg nqniallaqe
      301 tfsaeqwqnv lqkakiftps yknlvnasap eeiaqkmknw yv
//
LOCUS       WP_235149043             406 aa            linear   BCT 02-MAR-2025
DEFINITION  THUMP-like domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235149043
VERSION     WP_235149043.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037043.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18096.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..406
                     /product="THUMP-like domain-containing protein"
                     /calculated_mol_wt=45831
     Region          335..402
                     /region_name="Thump_like"
                     /note="THUMP domain-like; pfam18096"
                     /db_xref="CDD:465646"
ORIGIN      
        1 mdenllnnni pnigfseael dfiqkykhed vtklvlksaq fkeldvkkla aqilsrqkas
       61 kklpewsavd klifppalsv eqcsseatak ykssiisgkt lvditggmgv dsfylsknfe
      121 ethyfeqqee vaktafynfn llnakgisvh nqdsiaslsn tfdkvdwiya dparrdanrq
      181 kvvllsdctp dikfhlptlf ehtsnillkt splldidlaa qelkfvkeih vmgydhecke
      241 llfnidknfg qedlviksqi inaegkviss vaftrkqere aeielcepla ylyephpavl
      301 kagafkylga lfgvkklavh shlytsdklv sdfpgrifei igvskpdake intyvtdnka
      361 nltlrnfpak iddlrkkwrl keggniylfa ttlfnqkktv vvtkkl
//
LOCUS       WP_235149102            1123 aa            linear   BCT 02-MAR-2025
DEFINITION  ThuA domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235149102
VERSION     WP_235149102.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 1123)
  AUTHORS   Ampomah,O.Y., Avetisyan,A., Hansen,E., Svenson,J., Huser,T.,
            Jensen,J.B. and Bhuvaneswari,T.V.
  TITLE     The thuEFGKAB operon of rhizobia and agrobacterium tumefaciens
            codes for transport of trehalose, maltitol, and isomers of sucrose
            and their assimilation through the formation of their 3-keto
            derivatives
  JOURNAL   J Bacteriol 195 (17), 3797-3807 (2013)
   PUBMED   23772075
REFERENCE   2  (residues 1 to 1123)
  AUTHORS   Ampomah,O.Y., Jensen,J.B. and Bhuvaneswari,T.V.
  TITLE     Lack of trehalose catabolism in Sinorhizobium species increases
            their nodulation competitiveness on certain host genotypes
  JOURNAL   New Phytol 179 (2), 495-504 (2008)
   PUBMED   19086182
REFERENCE   3  (residues 1 to 1123)
  AUTHORS   Jensen,J.B., Peters,N.K. and Bhuvaneswari,T.V.
  TITLE     Redundancy in periplasmic binding protein-dependent transport
            systems for trehalose, sucrose, and maltose in Sinorhizobium
            meliloti
  JOURNAL   J Bacteriol 184 (11), 2978-2986 (2002)
   PUBMED   12003938
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018038.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06283.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..1123
                     /product="ThuA domain-containing protein"
                     /calculated_mol_wt=123886
     Region          27..240
                     /region_name="ThuA"
                     /note="Trehalose utilization; pfam06283"
                     /db_xref="CDD:461867"
     Region          252..698
                     /region_name="YliI"
                     /note="Glucose/arabinose dehydrogenase, beta-propeller
                     fold [Carbohydrate transport and metabolism]; COG2133"
                     /db_xref="CDD:441736"
     Region          706..781
                     /region_name="PKD"
                     /note="Repeats in polycystic kidney disease 1 (PKD1) and
                     other proteins; smart00089"
                     /db_xref="CDD:214510"
     Region          860..944
                     /region_name="CytC552"
                     /note="Cytochrome c551/c552 [Energy production and
                     conversion]; COG4654"
                     /db_xref="CDD:443692"
     Region          996..1118
                     /region_name="CBM6_xylanase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); many are
                     appended to glycoside hydrolase (GH) family 11 and GH43
                     xylanase domains; cd04084"
                     /db_xref="CDD:271150"
     Site            order(1012,1022..1023,1082,1112)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:271150"
ORIGIN      
        1 mnylsaffla scvcfaaiaq kvtsekrilv fsktagfrht sipagrvalv klgkengfgv
       61 dttenasvft eknlkkysav vflnttgnil ndtqqeafeh yiqagggylg ihaatdteyd
      121 wqwynklaga yfashpgnpn vqegeafvvn knhpsmegfp dhwkikdefy dfktfnpqvt
      181 vlvnideksy kdgkmgdnhp mswfheydgg kafytnfghe datflnpvfl khltgglnyv
      241 mastldyska rpeenrftkk vlvskldept elvvlddqrv lvaerkgklk lynpktgkmk
      301 iaaeipvyvk qeyglmglni dpnfktnklv ylyysplsse adtaqhlsrf kyddvkdtll
      361 lsteetlltv pvkrtdccht ggsiawdakg nlylstgddv npfqsngygp idgrpgregw
      421 dgrhsssntn slrgkilrik prygdrranm pggtnlydip egnlfsagtd ktrpeiyvmg
      481 trnpyrisvd qhtgyvywgd vgpdasnddp krgprgydev nqakksgyfg yplfiadnkp
      541 yvefnfadst sgkpfdpaap indsphntgl kklppaqpaf iyypyadspe fgpivgkggr
      601 namagpvfys ndyqeskskf pnyyngkffa ydwirdyinv vtmdkegnlv nmerfmpngk
      661 fshpidmqfa sdgslytley gpnwfaqnde aslsrityna gnrvpvaaak atnttgavpl
      721 kvtfsskgsi dydgdpvkye wsfgkglgks alpnptftyt kageytailk vtdnagnsnt
      781 sevmikagna ipqvdvaikg nktfywndkp vnyevavidk edgslvkksi peeevtltin
      841 ylegydktvl aqghqantgf dtgkrliels dckachsvdk ksigpayiev akryekerns
      901 lktltdkvik ggggvwgeqa maahpqhkpe eveemvkyil slskkqvvek kplrssyvte
      961 akkkdgsyif tasytdkgng amgpltgski valrpakiqa ntlddgkgfm kfktpagpev
     1021 vlgsadgsfi afddidltgi ssmsvavvss drtaggtlea rldspsglki geakvetsgt
     1081 inlattvqad nkkhkvvfvy knpqangkpl faidsiefke nam
//
LOCUS       WP_235149126             705 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5916 domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235149126
VERSION     WP_235149126.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039587.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19313.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..705
                     /product="DUF5916 domain-containing protein"
                     /calculated_mol_wt=80780
     Region          10..194
                     /region_name="CBM9_like_2"
                     /note="DOMON-like type 9 carbohydrate binding module;
                     cd09618"
                     /db_xref="CDD:187676"
     Site            order(98,117,119,176)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:187676"
     Region          220..>374
                     /region_name="DUF5916"
                     /note="Domain of unknown function (DUF5916); pfam19313"
                     /db_xref="CDD:466036"
ORIGIN      
        1 maqkpneefq yhihpapspv nvdgdpddpa wesaetatnf fmvtpmdtsy sraqttvkms
       61 ydanniyilv vnyktvknsi iveslkrdfn fgkndnfllf mdtfddrtng fsfganaaga
      121 pwdgqmgdgg tvdlswdnrw vsevkndpdk wvweasipfk siryksgiar wginfsrqdl
      181 tiseksawap vprqfpsaal aytgvlvwdq pppspgpnis vipyaatrlt rdfqndqsnk
      241 yktniggdvk iglspslnld ltvnpdfsqv dvdvqqtnln rfelffperr qfflenadlf
      301 anfgyatirp ffsrriglgv piqfgarmsg klnknwrigv ldvqtgsqdt ipknnyavfa
      361 lqrqvfarsn vrfifinrda vnysleknqy tnrynrniga eynlasvnnl wtgkvmflks
      421 ftpgrssddf vhaadlkfsr anffwqwqhe yvganynaev gyvpnatrng yykisptvgy
      481 lffiknpkii shgpkfvsni ywdkqmslsd reltfsynln fitratisay ltsnytrllr
      541 pfdptnlgke rlatgtehnw tsggfeiisg pqkqftytfa glfggyynng trtnlrtelg
      601 yrvqpyvaia lagnyndihl napwnrtqlw lvgpridvtf rnnlyfttfa qynnqadnin
      661 lnsrlqwryk pasdlfivyt dnylpenfmv ksraivlklt ywwnl
//
LOCUS       WP_235149144             452 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235149144
VERSION     WP_235149144.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 452)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 452)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 452)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..452
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=50042
     Region          69..451
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(164,194,196,228,230,429..431,433,435)
                     /site_type="active"
                     /db_xref="CDD:173840"
ORIGIN      
        1 msffesfaqi rgilksidln avgklakrvd lnkliglvmk msdadlakmv rlmqagegkq
       61 keapevsgdf yqldntltee dreiqlkvrs fmdseirpia neywnkahfp mhiiplmakl
      121 nicgltyqgy gcagksalle gfiamemarv dssistffgv hsglamgsiy mcgseeqkey
      181 wlpkmqrmem igafgltepe vgsgvagglt ttckkvgdew ilngqkkwig natfsditii
      241 warnlddnqv kgfivkkdnp gfkaekmedk malrivqnal itltdckvpe mdrlqnansf
      301 kdtanvlrmt ragvawqavg cgrgayelal nytlkrkqfg rpiagfqlvq dllvtmlgdl
      361 tamqtmvyrl sqlqdggdla dehaslakvf ctlrmrsivd harelfggng illeydiarf
      421 vadaeaiysy egtkeinsli vgraitgesa fv
//
LOCUS       WP_235149153             612 aa            linear   BCT 02-MAR-2025
DEFINITION  alkaline phosphatase [Dyadobacter sp. CY345].
ACCESSION   WP_235149153
VERSION     WP_235149153.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012470.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00245.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..612
                     /product="alkaline phosphatase"
                     /EC_number="3.1.3.1"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=67774
     Region          30..247
                     /region_name="PI-PLCc_GDPD_SF_unchar3"
                     /note="Uncharacterized hypothetical proteins similar to
                     the catalytic domains of Phosphoinositide-specific
                     phospholipaseand Glycerophosphodiester phosphodiesterases;
                     cd08577"
                     /db_xref="CDD:176519"
     Site            order(34,55,57,112,148,224)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176519"
     Site            order(34,69)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176519"
     Region          271..606
                     /region_name="PhoA"
                     /note="Alkaline phosphatase [Inorganic ion transport and
                     metabolism, General function prediction only]; COG1785"
                     /db_xref="CDD:441391"
ORIGIN      
        1 mkyilfislf vvfskttlya qtphryttgq ahshndyeqn ipflrayyqq fgsieadifl
       61 rndsifvdhd ekyitskntf snlylkpila qieknngsiy pdktlglqll idlktpgitt
      121 ipalvrelqp yasilapkgs vkivlsgntp ppaqfnqypd yiffdgrpei qytkaqleri
      181 glisqsftny tkwngkgvlv kkekealeev ikhvhgqgkk irfwatpdev nawkmlmnmg
      241 ldylntdkve elgpylrnra naeytapkpq avykptyknn dklskvknii lligdgmgla
      301 qiyagltanh gelnlsqfln igfsktaaad syitdsaaga tamatgqkar nraigvdtnn
      361 iplknlpdii kplgiktgli sagnitdatp aafyahqper smdstialdf lkstvdimig
      421 ggtmvfnkhk vsdslrtkgf qvsnqwkdla slkapfvlld dsktvsmlsg rgnfltesfa
      481 ktqqtlsksg kgffimaega qidygghank vpyvvtemld fdqligealk fadsngetlv
      541 ivtadhetgg ltlldgdlkk gyvdgsfstn dhtaimvpvf aygphaldfr giyenteifn
      601 kmlniftkyn kk
//
LOCUS       WP_235149215             371 aa            linear   BCT 02-MAR-2025
DEFINITION  S41 family peptidase [Dyadobacter sp. CY345].
ACCESSION   WP_235149215
VERSION     WP_235149215.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015531.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03572.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..371
                     /product="S41 family peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=41739
     Region          91..349
                     /region_name="Peptidase_S41"
                     /note="C-terminal processing peptidase family S41;
                     cl02526"
                     /db_xref="CDD:470603"
     Site            279
                     /site_type="active"
                     /note="Active site serine [active]"
                     /db_xref="CDD:143475"
ORIGIN      
        1 mktkiipflt lifaltytfv qaqessgqna vssddcscsr aleevidkvt riyagfddkv
       61 taktrpaydk liknlrskas svnsplacqt vlqtytgffk dshvssvwmr gtkqavsnme
      121 anknrtdlvt fmklnddfly vklavfdqre vgkmdsmlaa nrellaktpy limdlrgngg
      181 gntstsdema rliytnpivy pawdyrssee firskerelk aykdttepyn krvvnllhaa
      241 kanpgkmvkd sgdlvrtldv npqsyprqia flidkgsgsa tefyifegkq skkvtlfgtn
      301 sygvmdygsd qdfricdgiy nlatpwgrng wvkdfridnv gfkpdvsipe gekdwigfvq
      361 ryyakgntak k
//
LOCUS       WP_235149232             130 aa            linear   BCT 02-MAR-2025
DEFINITION  plasmid mobilization protein [Dyadobacter sp. CY345].
ACCESSION   WP_235149232
VERSION     WP_235149232.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 130)
  AUTHORS   Rehman,S., Li,Y.G., Schmitt,A., Lassinantti,L., Christie,P.J. and
            Berntsson,R.P.
  TITLE     Enterococcal PcfF Is a Ribbon-Helix-Helix Protein That Recruits the
            Relaxase PcfG Through Binding and Bending of the oriT Sequence
  JOURNAL   Front Microbiol 10, 958 (2019)
   PUBMED   31134011
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046164.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21983.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..130
                     /product="plasmid mobilization protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=15259
     Region          15..120
                     /region_name="MobC_2"
                     /note="MobC-like protein; cl44929"
                     /db_xref="CDD:479920"
ORIGIN      
        1 mgnqksnktr ivalrlspqe ftllerkfkg stcrklseyi rkvilekpvv vyyrnssldd
       61 avkevvrlrn elnnignnfn qavkklhtld qitefkswif syeldkrrll sqideikkqi
      121 dktadqwlqs
//
LOCUS       WP_235149243             398 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 88 protein [Dyadobacter sp. CY345].
ACCESSION   WP_235149243
VERSION     WP_235149243.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 398)
  AUTHORS   Mori,S., Akao,S., Miyake,O., Nankai,H., Hashimoto,W., Mikami,B. and
            Murata,K.
  TITLE     Crystallization and preliminary X-ray analysis of a novel
            unsaturated glucuronyl hydrolase from Bacillus sp. GL1
  JOURNAL   Acta Crystallogr D Biol Crystallogr 59 (Pt 5), 946-949 (2003)
   PUBMED   12777820
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019113.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07470.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..398
                     /product="glycoside hydrolase family 88 protein"
                     /calculated_mol_wt=45102
     Region          69..>317
                     /region_name="LanC_like"
                     /note="Cyclases involved in the biosynthesis of
                     lantibiotics, and similar proteins; cl04955"
                     /db_xref="CDD:471159"
ORIGIN      
        1 mkkipvliif lcllhpaysq skkaldvdke lsycltqvkk tlaekqpynr lprriskads
       61 nwnyvgiedw tsgfwpgtlw yayeyskdnt ikdaaagytn altpvldeke hdhdlgfmfy
      121 tsagngyrlt rdsvyrqtil rasdslallf npkvgtilsw prmisqmgwp hntimdnmin
      181 lemlfwaakn ggdkklrdia ekhaettmkn hfrpdwtsyh vavyddksge fikgvthqgy
      241 adnslwargq awaiygftms aretgrryfl etaqktadvy iknlpaghvp ywdfndpkip
      301 dapkdasaaa ivasgllels tlvkdkkvaq hyraeaerml tslassayks gdqnhafllh
      361 stghhpngte idvsinyady yyiealtrlk klragksl
//
LOCUS       WP_235149310             432 aa            linear   BCT 02-MAR-2025
DEFINITION  relaxase/mobilization nuclease domain-containing protein
            [Dyadobacter sp. CY345].
ACCESSION   WP_235149310
VERSION     WP_235149310.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 432)
  AUTHORS   Meyer,R.
  TITLE     Identification of the mob genes of plasmid pSC101 and
            characterization of a hybrid pSC101-R1162 system for conjugal
            mobilization
  JOURNAL   J Bacteriol 182 (17), 4875-4881 (2000)
   PUBMED   10940031
REFERENCE   2  (residues 1 to 432)
  AUTHORS   Bravo-Angel,A.M., Gloeckler,V., Hohn,B. and Tinland,B.
  TITLE     Bacterial conjugation protein MobA mediates integration of complex
            DNA structures into plant cells
  JOURNAL   J Bacteriol 181 (18), 5758-5765 (1999)
   PUBMED   10482518
REFERENCE   3  (residues 1 to 432)
  AUTHORS   Byrd,D.R. and Matson,S.W.
  TITLE     Nicking by transesterification: the reaction catalysed by a
            relaxase
  JOURNAL   Mol Microbiol 25 (6), 1011-1022 (1997)
   PUBMED   9350859
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015397.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03432.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..432
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /calculated_mol_wt=48467
     Region          54..234
                     /region_name="Relaxase"
                     /note="Relaxase/mobilization nuclease domain; cl21589"
                     /db_xref="CDD:451322"
ORIGIN      
        1 mvaiiktghs iqrsfyynen kisqadaqci maanypkdls dlnqmqrlnm llktaalnen
       61 vkrnsvhisl nfdpseklsk dqlteiagvy mdkigfkdqp flvyehydag hphihivsvk
      121 irpdgsriet nnigrnesek arkqieidfg lvkaeahkrq lfelkpvnvt kaqygksqtk
      181 qaisnvlntv lnaykyssva elnavlkqfn vladagskds rinknkglvy rilddkgqpv
      241 gvpikasdfh fnpglkylge rfalneiarq phkarvknai dlalmgtskp dlqglasdld
      301 kqgikmvlrq ndsgiiygit yvdhrsksvf ngsslgkqys anaiqercrp dllsqtskqe
      361 gqqeqanrkv nhegepfknk dhittfktns dssygqneml dslldpvkdd splpfglrkk
      421 kkrrqknisn gl
//
LOCUS       WP_235149335              78 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase family protein [Dyadobacter sp.
            CY345].
ACCESSION   WP_235149335
VERSION     WP_235149335.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 78)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00725.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..78
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=8561
     Region          <1..67
                     /region_name="PRK08293"
                     /note="3-hydroxyacyl-CoA dehydrogenase"
                     /db_xref="CDD:181359"
ORIGIN      
        1 mktvgadlgp mamadlvgmn taynvttsya eltgeqvwkd rrdflrenfi aknelgistg
       61 egfysypnpg yqnadflk
//
LOCUS       WP_235149354             976 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase 115 family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235149354
VERSION     WP_235149354.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027309.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15979.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..976
                     /product="glycosyl hydrolase 115 family protein"
                     /calculated_mol_wt=111258
     Region          176..519
                     /region_name="Glyco_hydro_115"
                     /note="Glycosyl hydrolase family 115; pfam15979"
                     /db_xref="CDD:435050"
     Region          792..961
                     /region_name="GH115_C"
                     /note="Gylcosyl hydrolase family 115 C-terminal domain;
                     pfam17829"
                     /db_xref="CDD:436074"
ORIGIN      
        1 mekkilmfva awilnafvvp ytvkaskfel vtqqnkvsiy ypkgesrlds iaahllasdi
       61 klvsgylpmv ssdlsyargn iivigradsk liasfgnkav danmkgkwec yslrllskpt
      121 nnisnaliis gsdirgtayg ifsisekigv tpwywwadat pkmqkslsin ienftskips
      181 vkfrgifind edwglqpwaa ktfepetkdi gpktyakvfe lllrlkanli wpamhpstka
      241 fyhypgnika aedyqivvgs shaepmlrnn vsewneksmg pfnyltnrqk vndywesrik
      301 esskvngiyt tgmrgihdge iqgvktmket vplldtiige qrsmlkkyvn kditkvaqvf
      361 tpykevleiy daglkvpddi tlvwpddnyg yiqrlsnrde nkrsggsgvy yhasywgrph
      421 dylwlgtshp ahireemtka yemnarqlwm lnvgdikpge yttqlfldma ydikpfekss
      481 fsithlqnwf atifgskqsa plagilwkyy dlaferkpey mgwsrteptt aidfteynht
      541 yyndqaqlri daynklvakv eainanidtr nkaafyelve ypvkgaalin kkflyrdkay
      601 lyarqgrlsa qtyallsnev ydkiakethy yntelaagkw kgmmnmfprk lpvfnltifd
      661 mpktnnlpaf ralpegnkns dsasnlhqft lpeydkwnkq kyfidiflcq dvtmnfaist
      721 seswitvsav kgelvpegll sqqriwveid werapvqkkl kgnlvikadn dqytfgisan
      781 nsqpdelksf agyieanryl sinateysav nntklrywst vdglglqgks lesfplnerp
      841 angdlntlnl kdnpalvydf ytftqspadi iitslptypl nknfevrygv siddgpvsif
      901 nfrtfgrsde wksnvlsnsa krtfkvsdlk agkhklkiym idpgvilnhi fidlgssqpf
      961 ygaitpthyn tiikdk
//
LOCUS       WP_235149367             272 aa            linear   BCT 02-MAR-2025
DEFINITION  MbnP family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235149367
VERSION     WP_235149367.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 272)
  AUTHORS   Kenney,G.E., Dassama,L.M.K., Manesis,A.C., Ross,M.O., Chen,S.,
            Hoffman,B.M. and Rosenzweig,A.C.
  TITLE     MbnH is a diheme MauG-like protein associated with microbial copper
            homeostasis
  JOURNAL   J Biol Chem 294 (44), 16141-16151 (2019)
   PUBMED   31511324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042462.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20243.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..272
                     /product="MbnP family protein"
                     /calculated_mol_wt=29828
     Region          36..248
                     /region_name="MbnP"
                     /note="pfam20243"
                     /db_xref="CDD:466394"
ORIGIN      
        1 mykyfatama vcavfllfsc stpaspspkp dtpaggklrl efdnvvgdkn lvlgsvtykn
       61 asnedfvvtk fnyfisnikl tkadgnvfvv pqdssyflvk edtktsqfvt lnnvpfgdyt
      121 aaefmigvds irntapiekr pgvldpsgsm mddgmywawn sgyifvkleg tsskgnpvng
      181 kfyyhiglfn gynertannt rvvkmdfgql kasvtesavp evhflvdvqk vfdgpaanis
      241 iaaynsimgg qpdksqqiad nyvkmfsldh ih
//
LOCUS       WP_235149412             919 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1553 domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235149412
VERSION     WP_235149412.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019223.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07587.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..919
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..919
                     /product="DUF1553 domain-containing protein"
                     /calculated_mol_wt=104808
     Region          44..100
                     /region_name="PSCyt1"
                     /note="Planctomycete cytochrome C; pfam07635"
                     /db_xref="CDD:429568"
     Region          163..374
                     /region_name="PSCyt2"
                     /note="Protein of unknown function (DUF1549); pfam07583"
                     /db_xref="CDD:429550"
     Region          431..537
                     /region_name="CBM6_xylanase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); many are
                     appended to glycoside hydrolase (GH) family 11 and GH43
                     xylanase domains; cd04084"
                     /db_xref="CDD:271150"
     Site            order(433,443..444,500,531)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:271150"
     Region          614..871
                     /region_name="PSD1"
                     /note="Protein of unknown function (DUF1553); pfam07587"
                     /db_xref="CDD:429553"
ORIGIN      
        1 mkkyifigli gitvslsafs wkeslfgrkv dyntevkpil nkncmgchgg vkkagdvsfl
       61 fehemlepgk sgkipvvrgd adasemirri lsedadekmp qkgnplteee vktlkdwine
      121 gaewekhwsy rriekpdvps lnnlwnlygl ietdekkfak neidnfvikk lkkeglnvsp
      181 eadritlirr vsldlsglpp mekevndfvn dkssdayekv vdrllkssay gerwasmwmd
      241 laryadtkgy esdgartmwr yrdyvvkafn qdkpfdkfti eqlggdllpg gkdgfpdknn
      301 liatgfhrnt mtnneggted eefrtsaqid rvnttwevwq gttfaciqch shpydpiphe
      361 dyykymayfn nsrdedlade spklrfykgn dsarvervks wiekynpsqt kevtqflnvm
      421 epkinshsfa kgdqstvlgv syfgvknkgn aripkvnler agsilmsvst kaenavltlh
      481 ldkidgavls qikipekgkd tviiapiskm agkhdiylsl nspkspeewv kiswisfqpe
      541 lpgsnqpeyk nivtdyatal tkstesipvi wegrgdfark thvfvrgnwm vkgaevkpdv
      601 pkllapmpke fsrdrlglak wivnrenplt grvivnrfwe qlfgkgivet vedfgsqgse
      661 pthpelldwl avrfmeddqw svkkllktiv msgtyrqssk tnkeklekdp yniwlsrgpr
      721 vrlsaeqvrd qalacsglis rkmygpgvmp pqpdkiwqsp ysgekwvlse gedkyrrgiy
      781 tywkrtapyp smvtfdapsr elcqsrrmlt ntplqalvtl ndpvyleaae klasrmkkrg
      841 ktpeqqlteg yrmltfqsie kenlnvllri ykealeiykr kpadadsili ygnehspela
      901 altisanvml nldnvvtke
//
LOCUS       WP_235149414             495 aa            linear   BCT 02-MAR-2025
DEFINITION  c-type cytochrome domain-containing protein [Dyadobacter sp.
            CY345].
ACCESSION   WP_235149414
VERSION     WP_235149414.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019262.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07635.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..495
                     /product="c-type cytochrome domain-containing protein"
                     /calculated_mol_wt=53588
     Region          1..155
                     /region_name="COG4244"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:443386"
     Region          196..255
                     /region_name="PSCyt1"
                     /note="Planctomycete cytochrome C; pfam07635"
                     /db_xref="CDD:429568"
     Region          348..373
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <358..>478
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          374..397
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          398..421
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          422..445
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
ORIGIN      
        1 mtltvivasd ftnfigrfhp vlvhapigfl liaalleagr rmgkisvses tvtfilfwsa
       61 vsatfacfag ymlslgggyd ekllsdhmwq gigvaafawi awllkseffq nsktllakfy
      121 fpafclatil tmtaghdggs lthgegyltq ytpepfrsla gmdpikkeis giqpiadiqq
      181 alvyqdivqp ilemkcvqch nekkqkgdlr vdqfvslqkg gkegpvfipg kgaessmitr
      241 cllpeddddh mppkgkpqls tdqitlisww idqgapvdkk vsdikvteqi ktalaglgss
      301 ggaskselpk saesaiaklt vsepsekdie alrkagllvn rlsqdqnlie vsavnaanfg
      361 daqislllpl aeqitwlklg ktkitdaglk evsklknltr lhlehtavgd aglanlkslk
      421 yleylnlvdt kvsdrglknv adnksvksvy vwgsavsdsa iavvtskypg lvitnglnke
      481 lmarfaqknd tltsk
//
LOCUS       WP_235149446             141 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235149446
VERSION     WP_235149446.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018663.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06983.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..141
                     /product="VOC family protein"
                     /calculated_mol_wt=15796
     Region          5..134
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mlrtspfllf dgncaeamrf yhkclggelt ltktsdtpmk dqfpiekher iiyaqlkgdt
       61 inisatdwma spvfvpeqgn ttaiyltgss ynelkpvfds lsdgadkder tfmelrevpf
      121 gvfgqftdky gvswvfrget a
//
LOCUS       WP_235149487             651 aa            linear   BCT 02-MAR-2025
DEFINITION  M12 family metallo-peptidase [Dyadobacter sp. CY345].
ACCESSION   WP_235149487
VERSION     WP_235149487.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13688.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..651
                     /product="M12 family metallo-peptidase"
                     /calculated_mol_wt=71133
     Region          209..363
                     /region_name="ZnMc"
                     /note="Zinc-dependent metalloprotease. This super-family
                     of metalloproteases contains two major branches, the
                     astacin-like proteases and the adamalysin/reprolysin-like
                     proteases. Both branches have wide phylogenetic
                     distribution, and contain sub-families, which...; cl00064"
                     /db_xref="CDD:469599"
     Site            order(337..338,341,347)
                     /site_type="active"
                     /db_xref="CDD:238124"
     Region          563..649
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     cl46851"
                     /db_xref="CDD:481191"
ORIGIN      
        1 mknlllvfcf lsqvahaqia sqlnvpaklt nteiqkldgl vkvlnviqle psalnsfvkr
       61 nplqaklkla vsnnltldlt lqqteirtad yksvmstkng evtdnsvavc ntysgyannd
      121 psqfvrlyid ndqikgivsd gkegfyaiep lsditntqdt dnryvvfnva dvqdidgkcg
      181 leepisqavs kaqaaartse tfnsecrile vatdadfeyf knngkntnar ilndmnivag
      241 iymstfnirl mvnyqhvytt andpytstdp skllmeftny wnknktdvkr dvahlftskf
      301 leaftlgiah kgvigktpnm aysltygtsn eyltvaheig hnfnashptd aksgcsttsk
      361 timcsgldka lafsdfsqge ikdwiaangk alltseyafe vlgdstlcsa tstyrmnllg
      421 vparwtssne svltinettg lakrigtesg ettitaaidv cgkplifskv iyvgipsvtt
      481 sltaidtygi vavntteiih stynwlldgt lvksgfendv kvnggmcgts hfiqgnitna
      541 cgttplsekl eyswkctntg aiiypnpatn iisidfeset aetelpkeil lynekstlvr
      601 sisnsgdtas aiasrktqfd vatlprgtyy vyviptkdsg qktevkrvvl r
//
LOCUS       WP_235149504             279 aa            linear   BCT 02-MAR-2025
DEFINITION  MbnP family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235149504
VERSION     WP_235149504.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 279)
  AUTHORS   Kenney,G.E., Dassama,L.M.K., Manesis,A.C., Ross,M.O., Chen,S.,
            Hoffman,B.M. and Rosenzweig,A.C.
  TITLE     MbnH is a diheme MauG-like protein associated with microbial copper
            homeostasis
  JOURNAL   J Biol Chem 294 (44), 16141-16151 (2019)
   PUBMED   31511324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042462.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20243.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..279
                     /product="MbnP family protein"
                     /calculated_mol_wt=30299
     Region          36..251
                     /region_name="MbnP"
                     /note="pfam20243"
                     /db_xref="CDD:466394"
ORIGIN      
        1 mkkliylssm lfigacliva cqysgpevgp pliipegrmv lkfdniagne dlvldnktys
       61 nsfgedltis kfnyfvsnfk lleeggdsyt ipqdssyfri veadpktqtv ilngipqgky
      121 tgieyiigvd slrsvsgiek rggaldpsgd magdgmywaw tsgyifvkle gtsskssssn
      181 gkfyyhigfy ggfdsenktv nniknvkinf agekavvtgd svpevrltad vlkvfngpdp
      241 vsveknpgim fdftlssgva nnyksmfgfg eikqnslak
//
LOCUS       WP_235149513             422 aa            linear   BCT 02-MAR-2025
DEFINITION  aspartyl protease family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235149513
VERSION     WP_235149513.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025034.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13650.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..422
                     /product="aspartyl protease family protein"
                     /calculated_mol_wt=47068
     Region          58..156
                     /region_name="Asp_protease_2"
                     /note="Aspartyl protease; pfam13650"
                     /db_xref="CDD:433378"
     Site            order(73,75,78,102..104,152)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     Site            73..75
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     Site            73
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     Site            order(102..105,109..112)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
     Region          201..>276
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(220,222,224,249..251)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133137"
     Site            220..222
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133137"
     Site            220
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133137"
     Site            order(249..252,256..259)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133137"
     Region          326..>408
                     /region_name="CtpA"
                     /note="C-terminal processing protease CtpA/Prc, contains a
                     PDZ domain [Posttranslational modification, protein
                     turnover, chaperones]; COG0793"
                     /db_xref="CDD:440556"
ORIGIN      
        1 mkkikwlifv ltifyihfpa cvnaekkpsk etasgffltg nrkydripfk frsnliiipi
       61 qingsdtlnf ildtgvanti vtdptaldks kldlkrkmmi eglgdgnmis ghtaignsls
      121 mqhmqvnqhn mlvldepits lsgyagipih giigyeifns fvvtldfark ellltlptry
      181 kystkngdkl pilvenakpy istdakisgk dfrdlrlmld tgagnallid htaqnkitlp
      241 esviepregl glngavrgsl gridaiklgs nelanvltsf pdsitygikl edrnnrqgsi
      301 gcdmlrrfki tfnypekyvl fkpiksrike gfeynmsgld ilaageklda yfidhvkens
      361 pgekaglkkg dqimfidgts vkemninevy qlmkkgdgka ldimvtreqk tffalvklqr
      421 ii
//
LOCUS       WP_235149591             285 aa            linear   BCT 02-MAR-2025
DEFINITION  SdiA-regulated domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235149591
VERSION     WP_235149591.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 285)
  AUTHORS   Ahmer,B.M., van Reeuwijk,J., Timmers,C.D., Valentine,P.J. and
            Heffron,F.
  TITLE     Salmonella typhimurium encodes an SdiA homolog, a putative quorum
            sensor of the LuxR family, that regulates genes on the virulence
            plasmid
  JOURNAL   J Bacteriol 180 (5), 1185-1193 (1998)
   PUBMED   9495757
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018659.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06977.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..285
                     /product="SdiA-regulated domain-containing protein"
                     /calculated_mol_wt=31642
     Region          1..285
                     /region_name="YjiK"
                     /note="Uncharacterized Ca-binding beta-propeller protein
                     YjiK [General function prediction only]; COG3204"
                     /db_xref="CDD:442437"
ORIGIN      
        1 msgqkiifri lfvfsllgmg cnsdgnksnt pkeydlsrpe tfnmpeslke isgiafnkgk
       61 gnvvytvqde egkvfrlnwq nqkhnqtkfs gkgdyeditl vreqvviles ngslftfpvs
      121 eaqfvetgks mewknllpkg eyesifgdea tgkiyvlcka csvdnpekkv sgyilsvgnt
      181 iektgnvsln vdeikalgvk vkrgfqpsal aknpvsgdwy ilsslnktli vvdknwkskl
      241 ayplssnnfn qpegiafdqs gnlyisnegd dmkdgnilkf krltk
//
LOCUS       WP_235149610             229 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Dyadobacter sp.
            CY345].
ACCESSION   WP_235149610
VERSION     WP_235149610.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..229
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=25161
     Region          6..104
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Region          <97..214
                     /region_name="PRK09483"
                     /note="response regulator; Provisional"
                     /db_xref="CDD:236538"
     Site            order(99..102,104)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
     Region          163..216
                     /region_name="HTH_ARSR"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; cl46857"
                     /db_xref="CDD:481197"
     Site            order(165..167,180..182,190..191,193..194,196..200,211)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:99777"
ORIGIN      
        1 mtnfkilfid nsfvvragle kitkdyvsla tsfkslsskt snlskikfds fdlviigavs
       61 tvttdvieyv kqpssktril ifsrdmkysd aldcllagan gfltqnagce eiaesivsvl
      121 gghqylcral meqmaqetlt enirrsktlt gnpkkwsasp vytlsrrqfq iaqgiiqgqs
      181 tstiayslgi anstlathks ilfkklgvnn lpelvdkyyd elnstitks
//
LOCUS       WP_235149613             142 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Dyadobacter sp. CY345].
ACCESSION   WP_235149613
VERSION     WP_235149613.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 142)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..142
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=16150
     Region          6..130
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(106..109,111)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 mgkdailyvg gdlddkflvs talsdigces kvvnfdngyq lleylrntee rpffilcdln
       61 ipqitglelk ekinaddelk krsipfifls dsvnprdvde aylslvqgfy lkpptydalk
      121 eqlsyicgyw erailpgrnn wd
//
LOCUS       WP_235149634             235 aa            linear   BCT 02-MAR-2025
DEFINITION  phage antirepressor KilAC domain-containing protein [Dyadobacter
            sp. CY345].
ACCESSION   WP_235149634
VERSION     WP_235149634.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 235)
  AUTHORS   Iyer,L.M., Koonin,E.V. and Aravind,L.
  TITLE     Extensive domain shuffling in transcription regulators of DNA
            viruses and implications for the origin of fungal APSES
            transcription factors
  JOURNAL   Genome Biol 3 (3), RESEARCH0012 (2002)
   PUBMED   11897024
REFERENCE   2  (residues 1 to 235)
  AUTHORS   Heinrich,J., Velleman,M. and Schuster,H.
  TITLE     The tripartite immunity system of phages P1 and P7
  JOURNAL   FEMS Microbiol Rev 17 (1-2), 121-126 (1995)
   PUBMED   7669337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015340.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03374.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..235
                     /product="phage antirepressor KilAC domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=27297
     Region          25..226
                     /region_name="KilAC"
                     /note="Phage antirepressor protein YoqD, KilAC domain
                     [Mobilome: prophages, transposons]; COG3645"
                     /db_xref="CDD:442862"
     Region          136..226
                     /region_name="ANT"
                     /note="Phage antirepressor protein KilAC domain;
                     pfam03374"
                     /db_xref="CDD:460903"
ORIGIN      
        1 mkqvayqeqv vvpgailsek lgcsndtlsd nfknnesryi egvhyfvlqg eelkafrlrp
       61 enfwlqispk trrlilwtek gafnhvkslg tdqawdafqq lvdtyfrlrm vvevlsdiks
      121 qeqkifsdee vkhaselllq tkevieiivf akligwgpnk ffkklredgy liksgqrknd
      181 pisayngkff klnkkeyknk vtsevrpyyq tyvtpegqih lankygvsfe tklik
//
LOCUS       WP_235149692             193 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1572 family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235149692
VERSION     WP_235149692.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019241.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07609.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..193
                     /product="DUF1572 family protein"
                     /calculated_mol_wt=22706
     Region          3..162
                     /region_name="MDMPI_N"
                     /note="Mycothiol maleylpyruvate isomerase N-terminal
                     domain; cl21506"
                     /db_xref="CDD:473890"
ORIGIN      
        1 mitaylesvr kqfeyykllg emtfrqlsdd qlfwkfneds nsiasivkhl hgnmlsrwtd
       61 fltldgekdw rnqdsefdnd lkdrkeilek wndgwqclfn aldssneenf dtvvyirnqg
      121 htiteainrq lshypyhvgq ivfigkmlkd yhweslsipr gesgkynaek fakpkgkqhf
      181 tdeytgkesg qnt
//
LOCUS       WP_235149695             555 aa            linear   BCT 02-MAR-2025
DEFINITION  alkaline phosphatase family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235149695
VERSION     WP_235149695.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 555)
  AUTHORS   Jin-Hua,P., Goding,J.W., Nakamura,H. and Sano,K.
  TITLE     Molecular cloning and chromosomal localization of PD-Ibeta (PDNP3),
            a new member of the human phosphodiesterase I genes
  JOURNAL   Genomics 45 (2), 412-415 (1997)
   PUBMED   9344668
REFERENCE   2  (residues 1 to 555)
  AUTHORS   Peiffer,W.E., Desrosiers,M.G. and Menick,D.R.
  TITLE     Cloning and expression of the unique Ca2+-ATPase from
            Flavobacterium odoratum
  JOURNAL   J Biol Chem 271 (9), 5095-5100 (1996)
   PUBMED   8617788
REFERENCE   3  (residues 1 to 555)
  AUTHORS   Deissler,H., Lottspeich,F. and Rajewsky,M.F.
  TITLE     Affinity purification and cDNA cloning of rat neural
            differentiation and tumor cell surface antigen gp130RB13-6 reveals
            relationship to human and murine PC-1
  JOURNAL   J Biol Chem 270 (17), 9849-9855 (1995)
   PUBMED   7730366
REFERENCE   4  (residues 1 to 555)
  AUTHORS   Murata,J., Lee,H.Y., Clair,T., Krutzsch,H.C., Arestad,A.A.,
            Sobel,M.E., Liotta,L.A. and Stracke,M.L.
  TITLE     cDNA cloning of the human tumor motility-stimulating protein,
            autotaxin, reveals a homology with phosphodiesterases
  JOURNAL   J Biol Chem 269 (48), 30479-30484 (1994)
   PUBMED   7982964
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01663.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..555
                     /product="alkaline phosphatase family protein"
                     /calculated_mol_wt=60869
     Region          32..281
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cd00016"
                     /db_xref="CDD:293732"
     Site            order(40,76,187,234..235)
                     /site_type="active"
                     /db_xref="CDD:293732"
     Site            order(40,76,187,235)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293732"
     Region          332..398
                     /region_name="CHB_HEX_C_1"
                     /note="Chitobiase/beta-hexosaminidase C-terminal domain;
                     pfam13290"
                     /db_xref="CDD:433091"
     Region          410..550
                     /region_name="PA14"
                     /note="domain in bacterial beta-glucosidases other
                     glycosidases, glycosyltransferases, proteases, amidases,
                     yeast adhesins, and bacterial toxins; smart00758"
                     /db_xref="CDD:214807"
ORIGIN      
        1 mtfnsqtlkf lflialfasc kkdgekapsg iehvivigid glspdgiqka ktpvihdmia
       61 ngsvkwnvrt vltssssqnw asmimgagpe qhgiisndwe mddhtlppiv qeadgrfpti
      121 fsvfhkakpe aeigtvyhwd gfgrlfqkna lnydknfste dstatdfiry ikdkkpalgf
      181 vhfdhvdhag hhgghgsqey yqsvakadsl vgqilkgikd agieentsvi iwadhggigy
      241 ghggatpqea eiagifygkd vkkgykieqq vytydlaati afalditppy awtgrpvksa
      301 fdgfsepenl wlgekmvtpp viyperklyq qagglfttet atvkidtkae kgitryttdg
      361 kdpdeaspey kapftvnktt vvkaksfdek gnasllstay frlvkpgsgn gltttfyqgk
      421 elsklpvfgt lkkgsswisp efninrdqin gilekgnesf alqfsgfiqi dtpgkytfst
      481 qsddgsklfi dgkefvdndg nhgvmeetgs ieltagrhpi rveyynnggg fwldafykgp
      541 gitkqlipan klfak
//
LOCUS       WP_235149732             372 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Dyadobacter sp. CY345].
ACCESSION   WP_235149732
VERSION     WP_235149732.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024118.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12706.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..372
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=42431
     Region          1..>60
                     /region_name="fliL"
                     /note="flagellar basal body-associated protein FliL;
                     Reviewed; cl00681"
                     /db_xref="CDD:469875"
     Region          103..347
                     /region_name="UlaG"
                     /note="L-ascorbate lactonase UlaG, metallo-beta-lactamase
                     superfamily [Carbohydrate transport and metabolism];
                     COG2220"
                     /db_xref="CDD:441822"
ORIGIN      
        1 mkkriikmlf iiialiavva vsiyifihqp kfgkmpsgar qakiekssnf kngqfqnlsf
       61 tpdlaegvsy fqvlkefifn kskrvkpest lpsvksdllh lnpeedilvw fghssyfmqi
      121 dgktmlvdpv lsgaaspvsf ttnsfpgsdv yvvedfpeid flfishdhwd hldfetimkl
      181 ktkvrkiitg lgtgehfetw gfdmskveer dwyeavnlgd gfsvnltpgr hfsgrglsrn
      241 ramwvsfvlq tptkklflgg dsgydthfkt igekfgpfdl allecgqynk nwkyihmmpe
      301 evaqaaedlk arklmpvhwa kfqlaqhdwd epiirvsaas klkniplvtp migevvklne
      361 drtypawwek ik
//
LOCUS       WP_235149756             470 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleoside hydrolase-like domain-containing protein [Dyadobacter
            sp. CY345].
ACCESSION   WP_235149756
VERSION     WP_235149756.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 470)
  AUTHORS   Hehemann,J.H., Marsters,C. and Boraston,A.B.
  TITLE     Ab initio phasing of a nucleoside hydrolase-related hypothetical
            protein from Saccharophagus degradans that is associated with
            carbohydrate metabolism
  JOURNAL   Proteins 79 (10), 2992-2998 (2011)
   PUBMED   21905122
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019260.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07632.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..470
                     /product="nucleoside hydrolase-like domain-containing
                     protein"
                     /calculated_mol_wt=53084
     Region          29..296
                     /region_name="DUF1593"
                     /note="Protein of unknown function (DUF1593); pfam07632"
                     /db_xref="CDD:462219"
     Region          <361..466
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
     Region          364..>413
                     /region_name="PKD_4"
                     /note="PKD domain; pfam18911"
                     /db_xref="CDD:436824"
ORIGIN      
        1 mklskilill fvnllcticq aqentvkkrv lvltdienep ddtqslirfl tysnqwdieg
       61 liattsihqk nkiavskike iitaygkvrk nlllhekgyp eieyllsvtk asfpefgmna
      121 vgkgkdsegs dwiisvvdkk ddrpvwipvw gganclaqal wkvsmtrspe dlkrfiskir
      181 vysisdqddt gpwlrknfpd lffvaspgyh aagayhyatw sgisgdkfhg rfsgadfeiv
      241 dnpwldenvr nhgplgaeyp ftkflmegdt psflglinng lndpekpnfg swggryeyyt
      301 prtqkwflep etrplwtdav devigkdgsy qtsnkatiwr wrsafqndfa armdwtikpf
      361 keanhppiaa lkhdnalkan sgdkvvlsae gstdpdgdel hyqwiyypep gsyadkeplk
      421 ildvkaants flapkvlkpe tihiilavtd ngkpaltryq rviltvfpek
//
LOCUS       WP_235149789             187 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4468 domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235149789
VERSION     WP_235149789.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14730.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..187
                     /product="DUF4468 domain-containing protein"
                     /calculated_mol_wt=20846
     Region          44..>113
                     /region_name="Bacova_04320_like"
                     /note="Uncharacterized proteins similar to Bacteroides
                     ovatus 4320; cl17095"
                     /db_xref="CDD:450153"
ORIGIN      
        1 mkrilvafll ltsvnylsfg qegilpldsk nnavysdvga vqhtrdvlft naqkwvvktf
       61 gnyenavvte drsngklvln tyapissaay eylrltitid cqdnkysvlm tdlegiaksq
      121 tikrlgkrqn deiqeksvlv ktesnrkqka laenelnemk sdnnsvnnav ygllaslkqm
      181 mlaesen
//
LOCUS       WP_235149824             714 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin cofactor-binding domain-containing protein
            [Dyadobacter sp. CY345].
ACCESSION   WP_235149824
VERSION     WP_235149824.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 714)
  AUTHORS   Dobbek,H., Gremer,L., Meyer,O. and Huber,R.
  TITLE     Crystal structure and mechanism of CO dehydrogenase, a molybdo
            iron-sulfur flavoprotein containing S-selanylcysteine
  JOURNAL   Proc Natl Acad Sci U S A 96 (16), 8884-8889 (1999)
   PUBMED   10430865
REFERENCE   2  (residues 1 to 714)
  AUTHORS   Romao,M.J., Archer,M., Moura,I., Moura,J.J., LeGall,J., Engh,R.,
            Schneider,M., Hof,P. and Huber,R.
  TITLE     Crystal structure of the xanthine oxidase-related aldehyde
            oxido-reductase from D. gigas
  JOURNAL   Science 270 (5239), 1170-1176 (1995)
   PUBMED   7502041
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014758.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02738.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..714
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=77808
     Region          8..>26
                     /region_name="TAT_signal"
                     /note="TAT (twin-arginine translocation) pathway signal
                     sequence; pfam10518"
                     /db_xref="CDD:463131"
     Region          <55..>181
                     /region_name="CoxL"
                     /note="Aldehyde, CO or xanthine dehydrogenase, Mo-binding
                     subunit [Energy production and conversion]; COG1529"
                     /db_xref="CDD:441138"
     Region          188..677
                     /region_name="CoxL"
                     /note="Aldehyde, CO or xanthine dehydrogenase, Mo-binding
                     subunit [Energy production and conversion]; COG1529"
                     /db_xref="CDD:441138"
ORIGIN      
        1 mqsveqssrr nflkiaaatg gglflgfncs naaalpsivn pealaagavn fnsfltignd
       61 niitifspnp eigqgiktaf pmivaeelda dwtlvktvqa nldtnkyerq vtggsgavph
      121 swerlrkaga taryllveaa skrwnvptse ittekgkvlh kssgksltyg eladeaskia
      181 ipkevklkde ksftligqsv rnvdnkniit gkplfgldfy regmlfaliq rpkafglklk
      241 svdsdaakkm pgivdvvtfg nsvavvgkst wqvkkarevl kidyekefdl essadhnrif
      301 kqllengeat vrrkngnvee afknaakvit aeyqcpflph splepmnffa hvredgvelv
      361 gptqtpdrar neaakitgfp pekvtveitr qgggfgrrls adyaieathv skmvkapvkv
      421 vwtreddmtg gtyrpavryr feaaldksgq migyklrgvg mnsgnptred nfpsgavdnl
      481 lidsvehksp ittgpwrapi tnflayaeqs fldevaeaag kdpiqfrlel fekakkspag
      541 evkydvdrmi avtklaaeks nwgkkkgvhq gfsvyfshrs yvaqvgevvv ekgkpvlknv
      601 iaavdcgivi nksgslqqvr ggvvdgvgha mygnmtfkdg apdqtnfngf rlirmseipe
      661 vdvhfvdngi sptglgepal ppagaaaana fykatkkrlr nqpfieeeaf ksis
//
LOCUS       WP_235149845             394 aa            linear   BCT 02-MAR-2025
DEFINITION  putative sensor domain DACNV-containing protein [Dyadobacter sp.
            CY345].
ACCESSION   WP_235149845
VERSION     WP_235149845.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF044863.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21751.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..394
                     /product="putative sensor domain DACNV-containing protein"
                     /calculated_mol_wt=43445
ORIGIN      
        1 magifneevk idskvsgstt yqaaqavakt veehflyhhe sakqhsiddf aprpsaevie
       61 aiidttfwas lrreeghsps vslaflpper sgqplifeqr lnfspailtk lapaversgi
      121 hlgiwienge lyiwgttrii pnlcfvlevi epgmlvikhr ridgfgkfvn vavlkgdqik
      181 ivddisgkip dcpnlvtsli gfnssslwnd slnvmvqlav smrdhkrggt llvvpsgket
      241 wrdsiihpis ysvtptftel adlykqhete sehpvwlnki tsavnhiagl tavdgatiin
      301 drfellafgv kigrsafssr vdkimvtepi vgnvasvvhp vqnggtrhls aaqfvydqrd
      361 slslvasqdg rftifswspc dnivqshrvd tllf
//
LOCUS       WP_235149990             296 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase [Dyadobacter sp. CY345].
ACCESSION   WP_235149990
VERSION     WP_235149990.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 296)
  AUTHORS   Urbach,C., Evrard,C., Pudzaitis,V., Fastrez,J., Soumillion,P. and
            Declercq,J.P.
  TITLE     Structure of PBP-A from Thermosynechococcus elongatus, a
            penicillin-binding protein closely related to class A
            beta-lactamases
  JOURNAL   J Mol Biol 386 (1), 109-120 (2009)
   PUBMED   19100272
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024748.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13354.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..296
                     /product="serine hydrolase"
                     /GO_function="GO:0008800 - beta-lactamase activity
                     [Evidence IEA]"
                     /GO_process="GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=32837
     Region          20..296
                     /region_name="PenP"
                     /note="Beta-lactamase class A [Defense mechanisms];
                     COG2367"
                     /db_xref="CDD:441934"
ORIGIN      
        1 mkhlclwvvl icfvkisala qpkqnicdlr qkistelqkh tgtyavafkd latgesllin
       61 esesfhaast mktpvmvevf kqaaegkfal tdsiiiknef ksivdgslys ldsiqdsdhl
      121 lyrkigqkra ikdlvyemii vssnfatnii idlvgaenvs ktmkelgakd iqilrgveda
      181 kayqkglnnt ttandlrilf egiaagkivd qkscdamiki lldqkfndvi pgklpkevkv
      241 ahktgsiskv yhdsgiiflp dgkkyvlvll skgwdeektt knmlaeisem iylhlk
//
LOCUS       WP_235150056              69 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2683 family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235150056
VERSION     WP_235150056.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022340.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10884.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..69
                     /product="DUF2683 family protein"
                     /calculated_mol_wt=7627
ORIGIN      
        1 mtilaieted kevikavkal lkgfkvsfne rsespydpef vemvkagdke iaegkgikvt
       61 aeelrslwn
//
LOCUS       WP_235150087             467 aa            linear   BCT 02-MAR-2025
DEFINITION  RagB/SusD family nutrient uptake outer membrane protein
            [Dyadobacter sp. CY345].
ACCESSION   WP_235150087
VERSION     WP_235150087.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 467)
  AUTHORS   Goulas,T., Garcia-Ferrer,I., Hutcherson,J.A., Potempa,B.A.,
            Potempa,J., Scott,D.A. and Gomis-Ruth,F.X.
  TITLE     Structure of RagB, a major immunodominant outer-membrane surface
            receptor antigen of Porphyromonas gingivalis
  JOURNAL   Mol Oral Microbiol 31 (6), 472-485 (2016)
   PUBMED   26441291
REFERENCE   2  (residues 1 to 467)
  AUTHORS   Bolam,D.N. and Koropatkin,N.M.
  TITLE     Glycan recognition by the Bacteroidetes Sus-like systems
  JOURNAL   Curr Opin Struct Biol 22 (5), 563-569 (2012)
   PUBMED   22819666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07980.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..467
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /calculated_mol_wt=51416
     Region          40..434
                     /region_name="SusD"
                     /note="starch binding outer membrane protein SusD;
                     cl21747"
                     /db_xref="CDD:451378"
ORIGIN      
        1 mkfkhiylip flaialascs edftdlnpvs qrnvngfylt andmntaina aykvlqntga
       61 ynqsywimqe mrsdntdqgp dgtglgadlt vidnfseiat seiitaaytd sylgiarsni
      121 vldriepitm dgalkeriks ealflrslfy ynlaisfgni pmplnepasv seggalpqlp
      181 aseiykqita dlikaeaglp ikytttadig ratkgaaaal lakiyltmgd ktaaipvlqr
      241 iitsygysll pnyanlwgia nknnaesife vqykgggtgt gntftnafsp llrqttgayk
      301 nrptvnmmra yepgddrflk smdssyvnaq gvlisssknd mrfitkygke nafnendasy
      361 nfvvlryadv llmlaealge seeaygyinq vraraklspi naatagtfed kllqerrvel
      421 afenhrwadl lrfgkaaeil kaqgktarll ylipqreldi ngsfkqn
//
LOCUS       WP_235150096             323 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase [Dyadobacter sp. CY345].
ACCESSION   WP_235150096
VERSION     WP_235150096.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 323)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 323)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..323
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=35615
     Region          6..303
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     Site            order(22..24,56,61,86,128,158..159,178,206..212,261,
                     278..281,286,289..290)
                     /site_type="active"
                     /db_xref="CDD:381296"
     Site            order(56,61,86,128)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381296"
ORIGIN      
        1 mknitkiqlg qngpfvsklg lgcmrmssiw ggtrpdetes iatiqealdn ginflntgdf
       61 ygaghnemli akaikgrrkd afisvkfgai fhngqplgmd lrpiaiknfi nysmtrlgie
      121 tidlyqpsrm dnsvpvedii gtvadlikeg kvrnigvsei taeqlrians iypisaleig
      181 ysladrqiei ellpvakelg isiiafanta eglltgeitt plsendyrnh fsrfqgdnli
      241 nnlkkvealk qlasdkgyts tqiaiawvnh qgnhivplvs msrrsrlpen ikamdiiftp
      301 eemnflntkf aigeilgsty lqr
//
LOCUS       WP_235148555            1769 aa            linear   BCT 02-MAR-2025
DEFINITION  S6 family peptidase [Helicobacter fennelliae].
ACCESSION   WP_235148555
VERSION     WP_235148555.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter fennelliae
  ORGANISM  Helicobacter fennelliae
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 1769)
  AUTHORS   Maldonado-Contreras,A., Birtley,J.R., Boll,E., Zhao,Y., Mumy,K.L.,
            Toscano,J., Ayehunie,S., Reinecker,H.C., Stern,L.J. and
            McCormick,B.A.
  TITLE     Shigella depends on SepA to destabilize the intestinal epithelial
            integrity via cofilin activation
  JOURNAL   Gut Microbes 8 (6), 544-560 (2017)
   PUBMED   28598765
REFERENCE   2  (residues 1 to 1769)
  AUTHORS   Johnson,T.A., Qiu,J., Plaut,A.G. and Holyoak,T.
  TITLE     Active-site gating regulates substrate selectivity in a
            chymotrypsin-like serine protease the structure of haemophilus
            influenzae immunoglobulin A1 protease
  JOURNAL   J Mol Biol 389 (3), 559-574 (2009)
   PUBMED   19393662
REFERENCE   3  (residues 1 to 1769)
  AUTHORS   Henderson,I.R., Czeczulin,J., Eslava,C., Noriega,F. and Nataro,J.P.
  TITLE     Characterization of pic, a secreted protease of Shigella flexneri
            and enteroaggregative Escherichia coli
  JOURNAL   Infect Immun 67 (11), 5587-5596 (1999)
   PUBMED   10531204
REFERENCE   4  (residues 1 to 1769)
  AUTHORS   Benjelloun-Touimi,Z., Si Tahar,M., Montecucco,C., Sansonetti,P.J.
            and Parsot,C.
  TITLE     SepA, the 110 kDa protein secreted by Shigella flexneri: two-domain
            structure and proteolytic activity
  JOURNAL   Microbiology (Reading) 144 (Pt 7), 1815-1822 (1998)
   PUBMED   9695914
REFERENCE   5  (residues 1 to 1769)
  AUTHORS   Stein,M., Kenny,B., Stein,M.A. and Finlay,B.B.
  TITLE     Characterization of EspC, a 110-kilodalton protein secreted by
            enteropathogenic Escherichia coli which is homologous to members of
            the immunoglobulin A protease-like family of secreted proteins
  JOURNAL   J Bacteriol 178 (22), 6546-6554 (1996)
   PUBMED   8932311
REFERENCE   6  (residues 1 to 1769)
  AUTHORS   Bachovchin,W.W., Plaut,A.G., Flentke,G.R., Lynch,M. and
            Kettner,C.A.
  TITLE     Inhibition of IgA1 proteinases from Neisseria gonorrhoeae and
            Hemophilus influenzae by peptide prolyl boronic acids
  JOURNAL   J Biol Chem 265 (7), 3738-3743 (1990)
   PUBMED   2105953
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014452.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02395.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1769
                     /organism="Helicobacter fennelliae"
                     /db_xref="taxon:215"
     Protein         1..1769
                     /product="S6 family peptidase"
                     /GO_function="GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=190932
     Region          27..721
                     /region_name="Peptidase_S6"
                     /note="Immunoglobulin A1 protease; pfam02395"
                     /db_xref="CDD:396804"
     Region          1508..1746
                     /region_name="Autotransporter"
                     /note="Autotransporter beta-domain; pfam03797"
                     /db_xref="CDD:461054"
ORIGIN      
        1 mrrfaysvlf iaviaqaqsi nignfyyrdy ldfgqnkgaf sgngsttimg kdgkeftipq
       61 tpnfsassny gsltsvgrgf avtanhvtsp esvdelrqwg ltkydianet vtdskgndin
      121 giskpygrde kflrfnkyiv egqtsmlnia nstkqgdtas tasetqnlkn fkaeleklkd
      181 ssgnvyiyqa gsgimdlrws dnpikninlp qdgsmkgggf gilnidssgy qnlvqvdasg
      241 dsrgiwyfyn pnsdfnnrit sgdsgsgiya ydstnqkwil lgvtsratsg vnraevsfvs
      301 nkdfvdyqkn feqkidlqnk lwtlngnald nntlsvdqti qgnkdiifsg ggtiqvekdi
      361 drtqsgyagg fvfvagdtat stnpttykft nangkthsfk gsgldigqnv vvewalgtqk
      421 gdslhkigkg elkitdskgd ngtlkigegk vtldtntkaf dniyitsgrg elalkagkae
      481 algatkngtt santinsgat satsytlaqd stdkmgfyfg kgggkfdlag nslvlntiaa
      541 ndsgaiitst satkatleiq glgydssgnk kttkentiih asigdsnstn sanqanidii
      601 hngdtkndsa hlifdgnint sgklsanktn ialqghatah atisnetirn qitnaengtq
      661 kgmpdymdls kpstlnqpdw ddrifkiaqg itltdstltl grnatlesni nasgnstikf
      721 ggnvkhfidn kdganingsg fgyyqkvevg nlseemqkia netihykgki tatggtiesh
      781 ildfnasldl knsakltady ltltntdsvs ldstssattk tlklqnvsds nlntiftnsn
      841 ttnsvklkvt ealwfnsvgs adspfdltkl dsanvkieqn ydirgvkssi tgntkdlsan
      901 vslfeeanlt lqsltlkntk anevtsgatn aiknsvylgn nttestftkl slteslkaen
      961 ldkaqiqldg kseiiapkit fnnvkdgila ldkdskltsa ngnanievsg ansslkisil
     1021 gdknfdinaq ggskitlgll esrdktqtps anfsgtitak dssvvatale sitasvdlsg
     1081 saklnamdiv lqnshnsikl sdtatltaqt itaksvanlt lqqnggtani gkfifdggtt
     1141 tltgnlignn ielknstikt tdltfnnkqn ttleldkdsk lditnlkven anlmlnfvns
     1201 atstanltni nlnnnanlni nswdfgnktt fssngnsrvt fenatymqns taknisvdst
     1261 isqmltlsnv gkdstksddr fktltfdknl tfsenakvqv kldssvkkge ssitlgtyyt
     1321 lisagsifdn rtdsridfif dsvkesdklf vvskydndkk nllikflesa pntfnelnkq
     1381 ishassryse ilkaltevrp ndeaidtatr tdnysvldkr iqtidsdlne iaqgnktrqt
     1441 rnllfsndqt intrisqvrl aqsgrnkhlr faqndtmyri qslmqgavrs dampsyarer
     1501 eldlsnsvwl nvgggyfggd skmgfgatni gydrliyags sdillgamfg fggsnaytgd
     1561 mtdsamfyni glylhsifds qggkygghei qsnisfsind nhktiesksa kntafgtlfa
     1621 lyykynfila qnntishalk pvvvlalgyn rngafeiney kqatynsvnf syglgveyna
     1681 vmsesfysla ltlkdmaysg gervfmslsg aqnfigysle saprfsaein ligshkltda
     1741 lylqygiagm vdsgtnygak gdikigykf
//
LOCUS       WP_235150155             304 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5777 family beta-barrel protein [Dyadobacter sp. CY345].
ACCESSION   WP_235150155
VERSION     WP_235150155.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040196.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19089.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..304
                     /product="DUF5777 family beta-barrel protein"
                     /calculated_mol_wt=34202
     Region          41..291
                     /region_name="DUF5777"
                     /note="Membrane bound beta barrel domain (DUF5777);
                     pfam19089"
                     /db_xref="CDD:436955"
ORIGIN      
        1 mkirlaiamv mmsswayaqe dllkqldqvq dsatvysaat fkgtriingh svetvgknnm
       61 dfiishrfga vnsgannffg ldesqirlal eyglsdrlmi gigrssyqkt idvfakyrll
      121 rqssgfknmp vsitlfasda hnastsstel pfytivqrqt ytfkaliark fseklslqlt
      181 ptivhrnlae nqidannlya lglggryklt krtsfnveyw ytpknfagtv qrdprftntl
      241 slgfdietgg hvfqlhltns rgmiekqfig qttgkwnngd ifygfnvart fsfdkskkrk
      301 ssgy
//
LOCUS       WP_235150164             604 aa            linear   BCT 02-MAR-2025
DEFINITION  RagB/SusD family nutrient uptake outer membrane protein
            [Dyadobacter sp. CY345].
ACCESSION   WP_235150164
VERSION     WP_235150164.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 604)
  AUTHORS   Goulas,T., Garcia-Ferrer,I., Hutcherson,J.A., Potempa,B.A.,
            Potempa,J., Scott,D.A. and Gomis-Ruth,F.X.
  TITLE     Structure of RagB, a major immunodominant outer-membrane surface
            receptor antigen of Porphyromonas gingivalis
  JOURNAL   Mol Oral Microbiol 31 (6), 472-485 (2016)
   PUBMED   26441291
REFERENCE   2  (residues 1 to 604)
  AUTHORS   Bolam,D.N. and Koropatkin,N.M.
  TITLE     Glycan recognition by the Bacteroidetes Sus-like systems
  JOURNAL   Curr Opin Struct Biol 22 (5), 563-569 (2012)
   PUBMED   22819666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07980.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..604
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /calculated_mol_wt=66433
     Region          48..>250
                     /region_name="SusD"
                     /note="starch binding outer membrane protein SusD;
                     cl21747"
                     /db_xref="CDD:451378"
     Region          301..604
                     /region_name="SusD_RagB"
                     /note="SusD family; pfam07980"
                     /db_xref="CDD:429768"
ORIGIN      
        1 mksikilita gliaafstgc ekvleehpqs qivpsyfnsp agvlggiagv yndirgqwgt
       61 egftvemqag tdefiqgvna gtgnaytyng lnssnfgsaw gvafqdintl ngvlqygqti
      121 dlneatrkqy laqakflraf wyfylvqtwg dvplhtefit vpsqaasrqp aaavyeliik
      181 dlteaaadlp nqptapflgk aatkpvaqfl lakayltrgw lnntvsdfta aaklcdeiia
      241 nksaygldlw qdygdafvpa ndygketmfv sdhvldpkyg yytvggaagg gaaqnlspwf
      301 tnwnypnnsg insiknaagv ftnsgtsgmi rdsyygrpyv rmrpnsdkqt tgtrtgknyf
      361 ldqaftnrdv dsrfansfyt vyisntavtn tpttanntrg igyttvpgvd tavwlpdyev
      421 pgapqfvgsr pfkgivvpps lwnngiypal kkymdpsrga nfndpstrpa vlyrfsdvyl
      481 tgaeayfkag daskaatmin vlrqraafrk tnttaqntaa atamnitaad vtldfilder
      541 sreffgewqr whdlvrtrsl vrrvqewnke aapyikdfhm lrpipqsqid rvvegpkfpq
      601 ntgy
//
LOCUS       WP_235150171             710 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-glucuronidase family glycosyl hydrolase [Dyadobacter sp.
            CY345].
ACCESSION   WP_235150171
VERSION     WP_235150171.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 710)
  AUTHORS   Nurizzo,D., Nagy,T., Gilbert,H.J. and Davies,G.J.
  TITLE     The structural basis for catalysis and specificity of the
            Pseudomonas cellulosa alpha-glucuronidase, GlcA67A
  JOURNAL   Structure 10 (4), 547-556 (2002)
   PUBMED   11937059
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03648.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..710
                     /product="alpha-glucuronidase family glycosyl hydrolase"
                     /GO_function="GO:0046559 - alpha-glucuronidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0045493 - xylan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=80334
     Region          30..693
                     /region_name="AguA2"
                     /note="Alpha-glucuronidase [Carbohydrate transport and
                     metabolism]; COG3661"
                     /db_xref="CDD:442878"
ORIGIN      
        1 mttriyklll fsyilisapt isadtlstdg ddgyrlwlky epvtdpaika dylkytvfis
       61 esgkgdimqs aarelqtglk dllgknvsvn npvgnksggi vlrlepnadi kqeegyriql
      121 lagnivissk sesgilygtf allrhmqiql siktlnltss pkvryrmlnh wdnpdgtver
      181 gyagsslwkw yelpervdpr yqdyaranas lgingtvlnn vnasarfmsq eyivkvaava
      241 nvmrkygikt ylsvyfaapk tigglptsdp ldpkvrawwk ekvaqiykei pdfggflvka
      301 nsegepgpqd ygrthadgan mlaeafqpye giviwrafvy kadpnadrfk aayeefvpld
      361 gkfdpkvivq vkngpidfqp repfsplfgn mpktplgvef qltqeylgfa thavyeapif
      421 kenldsdtyv ngkgstvakv vdgslhgysr tlmagvantg naknwtghpl aqanwyafgr
      481 lswdhtlsse qiakewtelt ltrnkkaqen ivglmmksre iyvdyntpig lsrpwmgvhf
      541 apepwqnkgs rpdwtavyyh radstglgfd rtasgsnalg qyrpevqqqw nnpdktplry
      601 llwfhhvawd kkissertlw eelctrfytg adsvvwmqqq wdlakpnldp qvytdvaarl
      661 kvqhreaiww rdswvlylqt fanqpipkgf eppkqtleev kksvniylmk
//
LOCUS       WP_235150247             255 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235150247
VERSION     WP_235150247.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 255)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..255
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=27951
     Region          29..101
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); cl02708"
                     /db_xref="CDD:445894"
ORIGIN      
        1 mrklslflll avlsvacskd edaepatvls dsnltlrfdd thqytltkgt etvnatnfkw
       61 tssdtlvgri dqsgkfsgrr igqtivkavs tdgkttvesk vtidpystlc tepvldfnan
      121 qaavkakekr tlvgedtsai eysgenaklr gvaylftkna lthsllafte tqavadeavq
      181 flaerydyvg edqsiyyftn nkvvvgflee eqlglvaiyv pfssgglrts atyeqnmkaa
      241 fknelkkika nfkgi
//
LOCUS       WP_235150333             181 aa            linear   BCT 02-MAR-2025
DEFINITION  outer membrane beta-barrel protein [Dyadobacter sp. CY345].
ACCESSION   WP_235150333
VERSION     WP_235150333.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024895.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13505.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..181
                     /product="outer membrane beta-barrel protein"
                     /calculated_mol_wt=18973
     Region          8..168
                     /region_name="OMP_b-brl"
                     /note="Outer membrane protein beta-barrel domain;
                     pfam13505"
                     /db_xref="CDD:463903"
ORIGIN      
        1 mkkyllgvml acaglssyaq sntvlvygnl ginssksamd iktssfefsp gvgyqwndhw
       61 tggvnlktts aktgspeikt tsfgagpfvr yayplsdifa vygqlntnfl agktagvkmn
      121 gfestlfpai gvnlkngfal nfnfgslgfa tgkvkgqnkt nsfglnfgsg vgfgmsknfg
      181 l
//
LOCUS       WP_235150303             392 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Dyadobacter sp. CY345].
ACCESSION   WP_235150303
VERSION     WP_235150303.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..392
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=44695
     Region          18..391
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mdiiitgqqa wdveigsnck nialefsktn rvlyvnsald rislmkngnd pkiakrkrvi
       61 nkqesgleei qenlwvlnpd qmiesvnwis sdlifnflnk rnnrifaqsi raaadklgfq
      121 ncihfndndm frsfylkeyl kprlsiyysr dfmlavdywk khgtalepql iaksdlcvan
      181 styladycrk fneksyyvgq gcdldifmng tndptpkdmi ainsprigyv galqslrldl
      241 dllrhiaisr ptwnivlvgp ednefressl hmlpnvvftg sktfdqlpay insfdvclnp
      301 qllnevtign yprkideyla vgkptvatkt damsvfskhv ylgetkedyv ilieqalaen
      361 stsksaerre fasshtwens vaeiykaiek sl
//
LOCUS       WP_235150338             234 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5683 domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235150338
VERSION     WP_235150338.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040144.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18935.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..234
                     /product="DUF5683 domain-containing protein"
                     /calculated_mol_wt=26098
     Region          56..232
                     /region_name="DUF5683"
                     /note="Family of unknown function (DUF5683); pfam18935"
                     /db_xref="CDD:465918"
ORIGIN      
        1 mkkwfligiv lfisgrgnaq tvrpdgekga avkivvsdta aivkgdtsll ktnkkwvpnp
       61 kkatklaail pgsgqiynrd ywkvplvyaa faggtwtaiy wnvryqdfvr gyktfydlne
      121 gsakygqlkd gvtsdtrlpv fyrggilnge rvdslaltvd qvrreknryr rfretaivft
      181 valyalsiie anvaahlktf dlsedlslnv apkvqqpnmt rptpgislvf nfkr
//
LOCUS       WP_235150363             137 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF983 domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235150363
VERSION     WP_235150363.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017935.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06170.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..137
                     /product="DUF983 domain-containing protein"
                     /calculated_mol_wt=15827
     Region          33..115
                     /region_name="DUF983"
                     /note="Protein of unknown function (DUF983); cl02211"
                     /db_xref="CDD:470495"
ORIGIN      
        1 mfkgtklysi ftntcpkcqt grffqtnnpy nlkkfdklne kceyckesft repgfyigsm
       61 yvsyalsvgl mvaffvgfvl ildldmyyvl tglvisyvil ipvmfrlarl iwinifvkyd
      121 pekgrvakee kktvigk
//
LOCUS       WP_235150472             548 aa            linear   BCT 02-MAR-2025
DEFINITION  RagB/SusD family nutrient uptake outer membrane protein
            [Dyadobacter sp. CY345].
ACCESSION   WP_235150472
VERSION     WP_235150472.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 548)
  AUTHORS   Goulas,T., Garcia-Ferrer,I., Hutcherson,J.A., Potempa,B.A.,
            Potempa,J., Scott,D.A. and Gomis-Ruth,F.X.
  TITLE     Structure of RagB, a major immunodominant outer-membrane surface
            receptor antigen of Porphyromonas gingivalis
  JOURNAL   Mol Oral Microbiol 31 (6), 472-485 (2016)
   PUBMED   26441291
REFERENCE   2  (residues 1 to 548)
  AUTHORS   Bolam,D.N. and Koropatkin,N.M.
  TITLE     Glycan recognition by the Bacteroidetes Sus-like systems
  JOURNAL   Curr Opin Struct Biol 22 (5), 563-569 (2012)
   PUBMED   22819666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07980.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..548
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /calculated_mol_wt=61916
     Region          61..507
                     /region_name="SusD"
                     /note="starch binding outer membrane protein SusD;
                     cl21747"
                     /db_xref="CDD:451378"
     Region          <328..547
                     /region_name="SusD_RagB"
                     /note="SusD family; pfam07980"
                     /db_xref="CDD:429768"
ORIGIN      
        1 minikkafki aamalplfat tactdldeni ydqlvtdnfy nnknevisav lrpythanaw
       61 atpgqdgwwr lnelsadqla wpvkgrhgqd ggkwlrlhyh twtadedavw gawrlmwwgl
      121 glctdpieal egrtpasmgi tdtekaayvs elkllrafhy lkimslfgni ptvtkvgdpv
      181 spptqpraev fkfiekeild ninaapklsq amigrmtqag gyamlvelyl naeawtgtar
      241 wddcvaaank lingeaggln gapvldanlt dtykpanfes keilfqlaye fkkatfqpqw
      301 tsdfyhfqqr fiyggarngn dgvvvipgvy ttfkatdkrk kewilegtqy qyadptkpvl
      361 atggneydnq plvfvdnirk nktlqagqdp nslpsdmtqg eensgvrfnk yklgaledpn
      421 yngsdwaiyr lswvmfakae almrkngkva taeavdlvnq vkqraytada wttekyttst
      481 ltmdellaer grefifegfr rddlirfdkf ttgswwdhkp tesykklfpi prrqitlnan
      541 lkqnegyn
//
LOCUS       WP_235150522             196 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxymuconolactone decarboxylase family protein [Dyadobacter sp.
            CY345].
ACCESSION   WP_235150522
VERSION     WP_235150522.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 196)
  AUTHORS   Ito,K., Arai,R., Fusatomi,E., Kamo-Uchikubo,T., Kawaguchi,S.,
            Akasaka,R., Terada,T., Kuramitsu,S., Shirouzu,M. and Yokoyama,S.
  TITLE     Crystal structure of the conserved protein TTHA0727 from Thermus
            thermophilus HB8 at 1.9 A resolution: A CMD family member distinct
            from carboxymuconolactone decarboxylase (CMD) and AhpD
  JOURNAL   Protein Sci 15 (5), 1187-1192 (2006)
   PUBMED   16597838
REFERENCE   2  (residues 1 to 196)
  AUTHORS   Eulberg,D., Lakner,S., Golovleva,L.A. and Schlomann,M.
  TITLE     Characterization of a protocatechuate catabolic gene cluster from
            Rhodococcus opacus 1CP: evidence for a merged enzyme with
            4-carboxymuconolactone-decarboxylating and 3-oxoadipate
            enol-lactone-hydrolyzing activity
  JOURNAL   J Bacteriol 180 (5), 1072-1081 (1998)
   PUBMED   9495744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014664.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02627.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..196
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /GO_function="GO:0051920 - peroxiredoxin activity
                     [Evidence IEA]"
                     /calculated_mol_wt=21531
     Region          29..188
                     /region_name="ahpD"
                     /note="alkylhydroperoxidase, AhpD family; TIGR00777"
                     /db_xref="CDD:129859"
ORIGIN      
        1 mypfaatgnt qdslykeinl paefesvlmn klaaldhryl kdlkinignv lksqninrke
       61 allialsvai neknaalisa ieelavaega dekeiaevta cvslmnannv fyrfrhfmdk
      121 efynnapagi kmsimvnpvl gkeffellsl vvsalngcem cvtsheqsvi nhggtqarif
      181 davrigaifk sftvli
//
LOCUS       WP_235150598             260 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF268 domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235150598
VERSION     WP_235150598.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015241.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03269.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..260
                     /product="DUF268 domain-containing protein"
                     /calculated_mol_wt=29589
     Region          57..214
                     /region_name="COG4976"
                     /note="Predicted methyltransferase, contains TPR repeat
                     [General function prediction only]"
                     /db_xref="CDD:444001"
     Region          <136..>204
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
ORIGIN      
        1 mikvisrtvl glgfnpiqff nslkgipsfi sdyikiskai sqypkfgkis ispflgdrye
       61 qggdmksiyf qqdlfvaqqv ykynpvrhld igsrtdgfva hiatfreidv vdirainsiv
      121 pniqfqqsdm mkkpdqslyg kydsisslha iehfglgryg dpidldghik aienihgllt
      181 dkgifyfsvp igtqriefna hrvfdvryll dvfkdkfvve sftyiddnkn ifrhqaltad
      241 qvqtnfgcty gcgifilrkv
//
LOCUS       WP_235150628             496 aa            linear   BCT 02-MAR-2025
DEFINITION  RagB/SusD family nutrient uptake outer membrane protein
            [Dyadobacter sp. CY345].
ACCESSION   WP_235150628
VERSION     WP_235150628.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 496)
  AUTHORS   Goulas,T., Garcia-Ferrer,I., Hutcherson,J.A., Potempa,B.A.,
            Potempa,J., Scott,D.A. and Gomis-Ruth,F.X.
  TITLE     Structure of RagB, a major immunodominant outer-membrane surface
            receptor antigen of Porphyromonas gingivalis
  JOURNAL   Mol Oral Microbiol 31 (6), 472-485 (2016)
   PUBMED   26441291
REFERENCE   2  (residues 1 to 496)
  AUTHORS   Bolam,D.N. and Koropatkin,N.M.
  TITLE     Glycan recognition by the Bacteroidetes Sus-like systems
  JOURNAL   Curr Opin Struct Biol 22 (5), 563-569 (2012)
   PUBMED   22819666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07980.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..496
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /calculated_mol_wt=54228
     Region          44..459
                     /region_name="SusD"
                     /note="starch binding outer membrane protein SusD;
                     cl21747"
                     /db_xref="CDD:451378"
ORIGIN      
        1 mktshiykll vlsaslatlt sctdlineek dsvvnevveg gfapvnvpea lasaykdlst
       61 ysdqagiyal gehttaemip ptrgvdwgdn gvwrtldaht wdashsyils awnalnqray
      121 kateiiasnp tpvqkaeaqf lraynmywvm dywgvvpvre vtqgvndlpr vlsrseafdy
      181 ivkdleealp nlvksgpsat ngtatkaaan fllaklylnk siykgttpgg pytfdkadmd
      241 kvvtyvdait adgyalekdy fstfssaakt epillvmegt aqnrwmmtlh ygqnpsgwng
      301 fstladfydt fetqdkrigs pakkdgteys giglgfligl qyddkgapvi dvrnqkplsf
      361 trdvplagas pekgirviky hpansgkyil mryaeaylmk aeaqfrggsa adaltqintl
      421 rttrgatalg slteqnlfde igrelywegg krttevrfgk fttgegtsvt dayttlypip
      481 saalvsnanl vqnpgy
//
LOCUS       WP_235150661             262 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Dyadobacter sp. CY345].
ACCESSION   WP_235150661
VERSION     WP_235150661.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..262
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=27894
     Region          7..257
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(14,16..17,19,38..40,92..94,142..144,157,161,
                     187..190)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187602"
     Site            order(116,144,157,161)
                     /site_type="active"
                     /db_xref="CDD:187602"
ORIGIN      
        1 mnldltekta ivcgstqgig lasaielalm ganvtlmarn eeslrqaves ldtslnqlhr
       61 yivadfsdne nvkeainnyl rlcpevhilv nntggpsggp iieaeteqfi ktfqmhlvny
      121 qiltqavvps mkkagfgriv nitstsvkqp ivglgvsnti rgavaswskt mslelgpfgi
      181 tsnnvlpgft ktarlnavle mrsqaqeksv qeiseqmqat ipirrfseae evaaavaflc
      241 spaagsisgv nlpvdggkte sm
//
LOCUS       WP_235150667              67 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1482 family protein [Escherichia coli].
ACCESSION   WP_235150667
VERSION     WP_235150667.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07358.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..67
                     /product="DUF1482 family protein"
                     /calculated_mol_wt=7058
     Region          5..61
                     /region_name="DUF1482"
                     /note="Protein of unknown function (DUF1482); pfam07358"
                     /db_xref="CDD:369331"
ORIGIN      
        1 mntvfalvlt vflntgepvd lvigihdsmk ecmaaaaeqk ipgscypvdk virmdnneip
       61 aglktap
//
LOCUS       WP_235150704             118 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein, partial [Escherichia coli].
ACCESSION   WP_235150704
VERSION     WP_235150704.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06763.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>118
                     /product="phage tail protein"
     Region          3..>118
                     /region_name="Minor_tail_Z"
                     /note="Prophage minor tail protein Z (GPZ); pfam06763"
                     /db_xref="CDD:284235"
ORIGIN      
        1 maikgleqav enlsrisrta vpgaaamain rvassaisqs asqvaretkv rrklvkerar
       61 lkratvknpq arikvnrgdl pviklgnari vlsrrrrrkk gqrsalkggg svlvvgnr
//
LOCUS       WP_235150710              62 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1187 family protein [Escherichia coli].
ACCESSION   WP_235150710
VERSION     WP_235150710.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018403.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06688.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..62
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..62
                     /product="DUF1187 family protein"
                     /calculated_mol_wt=6918
     Region          1..62
                     /region_name="DUF1187"
                     /note="Protein of unknown function (DUF1187); cl23874"
                     /db_xref="CDD:305031"
ORIGIN      
        1 mykitatiek egdsptswtr ysttkltkse cekmlsgkke agvsreqkvk linfnceklq
       61 ss
//
LOCUS       WP_235150750             527 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase [Dyadobacter sp. CY345].
ACCESSION   WP_235150750
VERSION     WP_235150750.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025938.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14587.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..527
                     /product="glycoside hydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /calculated_mol_wt=59314
     Region          30..385
                     /region_name="Glyco_hydro_30"
                     /note="Glycosyl hydrolase family 30 TIM-barrel domain;
                     cl23815"
                     /db_xref="CDD:451560"
ORIGIN      
        1 mqisikaial ifcsfgifqk svaqpkkekp vvftidsqnk aqlienfgaa gcwfsegigk
       61 ywpeekkeqi aewlfsksfd kngnpkgigl sawrfniggg taeqgessgi kdfrkrvesf
      121 qnpdgtydwn kqagyvwfvk kaksygvenl iafsntppvh ftqngygfkt ekdyksnlka
      181 dkysayagfl advikhfdae nlhfnyispv nepqwdwsnk pgqasqegtp wkneeiykvt
      241 taldsaltsk rltskimlve agmlnylyag sgmanrqiqn ffgkdsklev rnlknmsdfi
      301 gghsyfteng dsslvqirks vadtaqkyni kfwqteysml adgfregtkg krsaidcalf
      361 lakvihndlv vgnasawqlw nsyepgspdf dtryflialk pnekhtdgey fktkglwsfg
      421 nfsrfirpgm qrihtersdk ltdlqaaqhv mfsaytddkg kvvvvainyt gvekpvkldl
      481 knsgkaskik kyitsaaend nlkpypeqki tdtivlpars vttmvid
//
LOCUS       WP_235150764             207 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Dyadobacter sp.
            CY345].
ACCESSION   WP_235150764
VERSION     WP_235150764.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..207
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=23637
     Region          <49..198
                     /region_name="PRK15369"
                     /note="two component system response regulator"
                     /db_xref="CDD:185267"
ORIGIN      
        1 mtrillfikn dffrlgitas iqenvsdasi eetdnwenaq aalkksyydi limdirlsnl
       61 snlqsfdsir riqpnikilv mgeenekvwa ipylkkgvdg iclktmtkye fqsalstvik
      121 gkkyifdgit dflleglmdq nlmtllstre seilqfllkg srtaeiakel klapstistm
      181 kfkiyrkmqv knvvdlvnkv esyqsra
//
LOCUS       WP_235150804             595 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1420 family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235150804
VERSION     WP_235150804.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018876.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07220.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..595
                     /product="DUF1420 family protein"
                     /calculated_mol_wt=66855
     Region          <114..590
                     /region_name="DUF1420"
                     /note="Protein of unknown function (DUF1420); pfam07220"
                     /db_xref="CDD:115849"
ORIGIN      
        1 mhtlnsylip aplstlltii lglsvaivad fagkkivkdh tpvfqamyff agllvlswtt
       61 wiicllslat ifvfqgliwt imlaaaflli tkrsaldvsl nlrsapypkp afsylryili
      121 fiffcyllls lsvptdadsl syhlalpvei lknhsiyynp dnihfrmggf gemlnligva
      181 ngcpqfgafi qiiglgffln asvscidsgq ksdlitiflg ipvllflipn qkhqltgilc
      241 tslcflylcs tnnftsgklt lflsvlffaa gikysfllsf aslvlllilk npvgvnpfgm
      301 lvklfflgav ilgpqlvfkw fylgdplspl lelfmpnadp ivvklyqyik aysdssypfp
      361 islvytnsig klstlvgisa itlgllpflf ryykfevisi saliflilig gqvssrflle
      421 pvlwsvplai stfykskiyk yfilaarlql fcilplllig iynlapsifs dsgrekvmlk
      481 asngyaenkw idevlppdar icmtsrsraf iarnyfpwey lyftsmenkk eaeeldrklk
      541 iqykteylil pstgfdalrn kyageiiagp kkfhlatrnp fnssdyemvi yrmkk
//
LOCUS       WP_235150853             777 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase family 28 protein [Dyadobacter sp. CY345].
ACCESSION   WP_235150853
VERSION     WP_235150853.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 777)
  AUTHORS   Petersen,T.N., Kauppinen,S. and Larsen,S.
  TITLE     The crystal structure of rhamnogalacturonase A from Aspergillus
            aculeatus: a right-handed parallel beta helix
  JOURNAL   Structure 5 (4), 533-544 (1997)
   PUBMED   9115442
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012516.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00295.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..777
                     /product="glycosyl hydrolase family 28 protein"
                     /GO_function="GO:0004650 - polygalacturonase activity
                     [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=85738
     Region          22..230
                     /region_name="Rhamnogalacturan_acetylesterase_like"
                     /note="Rhamnogalacturan_acetylesterase_like subgroup of
                     SGNH-hydrolases. Rhamnogalacturan acetylesterase removes
                     acetyl esters from rhamnogalacturonan substrates, and
                     renders them susceptible to degradation by
                     rhamnogalacturonases. Rhamnogalacturonans are...; cd01821"
                     /db_xref="CDD:238859"
     Site            order(30,66,98,215)
                     /site_type="active"
                     /db_xref="CDD:238859"
     Site            order(30,212,215)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238859"
     Region          260..694
                     /region_name="Pgu1"
                     /note="Polygalacturonase [Carbohydrate transport and
                     metabolism]; COG5434"
                     /db_xref="CDD:444185"
ORIGIN      
        1 mkkllflsfl iitgfkpdqd kiqvfligds tlankapgda petgwgmvfq efftdkikve
       61 nhaqngrstk sfinegrwak vtknlksgdw vliqfghnds kdkdtsryaa antdykknli
      121 rfinetrakg gnpvlitpvm rrrfdekgtf fdthgnypaa vkavakeqkv pmidlhalsq
      181 evivqhgleg skalfmhvea ghypkfpkgl vddthftvyg akimaglvak svheldldlk
      241 khlkhfgdtd kfvydlpvvq qpsfrkdtfn visygakndg lvlnsaaink aieacaekgg
      301 gtvlipegfw lsgpitlksn inlhlakgal lqfsdnykdy plvktnwegl daircqspvs
      361 atdavniait gggiidgagq awrsvkkekl tdsqwqklva sggvldqaqr iwypsegskl
      421 gnttpgagni aagytmetvt kfqeylrpnm irfsnckkil legvtfqnsp awnlhpmlcd
      481 hitlknltvr npwyaqngdg vdlescrfal idnctfdvgd dgiciksgrd eegrkrgvpt
      541 envivqnstv fhghggfvig semsggvknl finncnflgt dvglrfktar grggvvenif
      601 isninmtnip geailfdmyy makdpvpkag eknelpvmka epvnagtpqf qnfnirnivc
      661 kraetaimvr glpemsikni tienavlqsn kgfvciegen inlknvsfft kdktvmqiqn
      721 stnvtmdkis yaddrdlllk vigdrskgir llntddkkak kniefsgnas skaltrn
//
LOCUS       WP_235150881             208 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235150881
VERSION     WP_235150881.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>208
                     /product="DUF6531 domain-containing protein"
     Region          1..>208
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
ORIGIN      
        1 lgakvlpget dlalpgplpf ilsrtyssyr tktpapvgif gpgwkapsdi rlqlrddalv
       61 lndnggrsih fepllpgeav ysrseslwlv rggkatqpdg htlarlwasl ppdirlsphl
      121 ylatnsaqgp wwilgwserv pgaedvlpap lppyrvltgm adrfgrtlty rreaagdlag
      181 eitgvtdgag refrlvlttq aqraeear
//
LOCUS       WP_235150999             495 aa            linear   BCT 02-MAR-2025
DEFINITION  SusD/RagB family nutrient-binding outer membrane lipoprotein
            [Dyadobacter sp. CY345].
ACCESSION   WP_235150999
VERSION     WP_235150999.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 495)
  AUTHORS   Koropatkin,N., Martens,E.C., Gordon,J.I. and Smith,T.J.
  TITLE     Structure of a SusD homologue, BT1043, involved in mucin O-glycan
            utilization in a prominent human gut symbiont
  JOURNAL   Biochemistry 48 (7), 1532-1542 (2009)
   PUBMED   19191477
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024181.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12771.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..495
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /calculated_mol_wt=53749
     Region          30..453
                     /region_name="SusD-like_2"
                     /note="Starch-binding associating with outer membrane;
                     pfam12771"
                     /db_xref="CDD:463695"
ORIGIN      
        1 mksilknsll llgalslgsc enwldvnedp nnptnvapqy vlpvaqasvm avtggsfaii
       61 ggmwsqhwtq anvstqykti dsydlqpady nnawtemyag glndfedvkr kaaaagnnnm
      121 vlqavagqty gyqiladwfd kiplsealqi evtktpkydd gpavyaelik rldaalaldf
      181 nnvtstqvss dlvfgklsga eqiaqwkrfa ntlklkmylr qtsspnsaaa laaikamlaa
      241 nteflttaas vtsfvdepsr snplyesnvr qlntgtnlrl sktlqsflea nndqarlnay
      301 ftpgssgqfg laqgnydvst tvvgpnvpsv tklsatdpff ffsldevdfm laeahlrsgn
      361 daqakafydk gvadayakfn vtfdaskiaa ggvyafptag tteaklkaii vqkwvamykq
      421 gyesfwdqar tgypeispva ttdasyipgq wtyaingvtg kvfpkrilyt sasrdvnpgn
      481 tpapakvtdk iwwmk
//
LOCUS       WP_235151014             122 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF7009 family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235151014
VERSION     WP_235151014.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046888.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22668.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..122
                     /product="DUF7009 family protein"
                     /calculated_mol_wt=13765
ORIGIN      
        1 mkiriqgnsi rirlsksevn qlanegmvee ktsflnssfg yclrsiagik elsasyddnq
       61 iimfvpesll enwpannivg feanmpiset dflylllekd fkcldntsed qsdnfenpnk
      121 nc
//
LOCUS       WP_235151061             490 aa            linear   BCT 02-MAR-2025
DEFINITION  SusD/RagB family nutrient-binding outer membrane lipoprotein
            [Dyadobacter sp. CY345].
ACCESSION   WP_235151061
VERSION     WP_235151061.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 490)
  AUTHORS   Koropatkin,N., Martens,E.C., Gordon,J.I. and Smith,T.J.
  TITLE     Structure of a SusD homologue, BT1043, involved in mucin O-glycan
            utilization in a prominent human gut symbiont
  JOURNAL   Biochemistry 48 (7), 1532-1542 (2009)
   PUBMED   19191477
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024181.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12771.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..490
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /calculated_mol_wt=53856
     Region          34..457
                     /region_name="SusD-like_2"
                     /note="Starch-binding associating with outer membrane;
                     pfam12771"
                     /db_xref="CDD:463695"
ORIGIN      
        1 mrkiaykplv laltaamfsm nsctkdfeel nsnpndptlv kaqylltsgl essidrywgh
       61 rdrferinid aaelymqhlt rniysnegdd ytvsvavtnn nwkgfyndaq vnfqriitis
      121 spdgatpnan yvgvamvmrt wvfslltdmy gpipyseaiq gtaatpiytp kydsqeavya
      181 amladlktan slltvggpav agdivyngdv lkwkkfansl rlrlanrqak kkpgeskavf
      241 aeilgdatty pifttnadna qlncsavlps nnewnqiiiq ggrtdwnlsk tlvdqmnsmg
      301 dtritvygnp nkdgvyqghp nglpdaiatt flsssstign yftratapev imtfaelnfi
      361 laeaaidgdi tgdadayfkt avnasftqya ltpsaafldk lgtatkekim eqkwvalfgq
      421 gieawaewrr tglpkfpapd aravlnndgv lptrftystn eyslnkesve ggvallggkd
      481 dmktklwwae
//
LOCUS       WP_235151095             308 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2279 domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235151095
VERSION     WP_235151095.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021554.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10043.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..308
                     /product="DUF2279 domain-containing protein"
                     /calculated_mol_wt=35412
     Region          82..160
                     /region_name="DUF2279"
                     /note="Predicted periplasmic lipoprotein (DUF2279);
                     cl11574"
                     /db_xref="CDD:448313"
ORIGIN      
        1 mkyfykikvl ffllilafcr isangqtdsi afiqedsvre irpnykmlrg ifaaqstlyl
       61 gtiyglsksw yknpltnfrv kddtyewlqm dkmghvytsy qiarhtaeiy kktgiskkqm
      121 miygaisgvi fqtpieildg fspeygfspg dmvanltgsa iylgqialwd evriqpkfsf
      181 hftslakerp nllgskpter wlkdyngqty wysgspksff kgsswpawlc fsigygiqdm
      241 vaseksksie mgfrpyrqyy lsmdidltki ktrskfvrtv aflanslkip apalqfskng
      301 idfkplyf
//
LOCUS       WP_235151112             354 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Dyadobacter sp. CY345].
ACCESSION   WP_235151112
VERSION     WP_235151112.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 354)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..354
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=40518
     Region          3..>119
                     /region_name="PleD"
                     /note="Two-component response regulator, PleD family,
                     consists of two REC domains and a diguanylate cyclase
                     (GGDEF) domain [Signal transduction mechanisms,
                     Transcription]; COG3706"
                     /db_xref="CDD:442920"
     Region          167..352
                     /region_name="Crp"
                     /note="cAMP-binding domain of CRP or a regulatory subunit
                     of cAMP-dependent protein kinases [Signal transduction
                     mechanisms]; COG0664"
                     /db_xref="CDD:440428"
ORIGIN      
        1 meakrillie dnpemrenta eilelanyhv ltaqngkegv qvahhekpdl iicdimmpel
       61 dgygvlhmlg kddqtanipf vfltakaekn dyrkgmtmga ddyltkpydd vellnaveir
      121 lkkserlkgq ftrtaeglde fiheaksfdl itkladdkki kvlkkketvy tegsfpsnvf
      181 flqkgkvkay ksndngkeyi tdlykegdff gyldllqges yqetaislek sevamipkdd
      241 ffnllqgnre vatkfikmls neikdreerl lqlaynsvrk rvaqalvmlv qryqedkskp
      301 fsmaitredi asmvgtatet virtlsdfke eklvdmkgsl itvleydkli rmrn
//
LOCUS       WP_235151134             123 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF983 domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235151134
VERSION     WP_235151134.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017935.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06170.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..123
                     /product="DUF983 domain-containing protein"
                     /calculated_mol_wt=14213
     Region          8..100
                     /region_name="DUF983"
                     /note="Protein of unknown function (DUF983); cl02211"
                     /db_xref="CDD:470495"
ORIGIN      
        1 mskivnvirm kcprchrgml ftkqnpysln dglkmpdncp vcgqdfkiep gfyigalwts
       61 fpiviflmtl lsvfflvfvk mqlewffvti tvilfslqpi iirlgraiwi nifvdfdqda
      121 enk
//
LOCUS       WP_235151168             185 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6932 family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235151168
VERSION     WP_235151168.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046172.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22014.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..185
                     /product="DUF6932 family protein"
                     /calculated_mol_wt=21483
ORIGIN      
        1 mipdfdynnv lpphkgdpri asdlspyvct tldmvqkfat skerieiltk finfrkairq
       61 fgmqgsafqw idgsfvenie ileqraprdi dvitfffgyt pnfldnfvqn mpefqdpiis
      121 klnykvdhyp veidadplst lyavkywtml fthnrigiwk gileleintp nededalvym
      181 qnlqs
//
LOCUS       WP_235151277              83 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6814 family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235151277
VERSION     WP_235151277.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF044889.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20664.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..83
                     /product="DUF6814 family protein"
                     /calculated_mol_wt=9061
ORIGIN      
        1 mnalkrilgi vwivlgptli lflvmqalek inaaadgiar tnttlqwsii iiifipicag
       61 lvifgyygvk geydrlprss ddl
//
LOCUS       WP_235151263             521 aa            linear   BCT 02-MAR-2025
DEFINITION  SusD/RagB family nutrient-binding outer membrane lipoprotein
            [Dyadobacter sp. CY345].
ACCESSION   WP_235151263
VERSION     WP_235151263.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 521)
  AUTHORS   Koropatkin,N., Martens,E.C., Gordon,J.I. and Smith,T.J.
  TITLE     Structure of a SusD homologue, BT1043, involved in mucin O-glycan
            utilization in a prominent human gut symbiont
  JOURNAL   Biochemistry 48 (7), 1532-1542 (2009)
   PUBMED   19191477
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024181.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12771.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..521
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /calculated_mol_wt=57031
     Region          31..489
                     /region_name="SusD-like_2"
                     /note="Starch-binding associating with outer membrane;
                     pfam12771"
                     /db_xref="CDD:463695"
ORIGIN      
        1 mkkflrllyl apmalfftac dngfeemnvn pnastavvpg flftrtqlat vsnnftgaay
       61 ltiggsmqhf atykevpaag dkyfnysyst aswglyggtd mttqgavidi eqviasvntl
      121 padvnklsva riwkaymyhr ltdlygdvpy seagkaltek nytpkydeqs aiyadmlkel
      181 eqaiaafdpa qatfgtsdli yggditkwkk fgyslmlrlg mrltqvdaal aktwvqkaia
      241 ggviisdedi atiayvdgsv tasrnfissg lmstdyvtpg gdnveggkla ktlidylktt
      301 kdprlnvisv vwvkptatsa yvadtatalq kgmpnaafns lpadfdsyse pnpntilkyn
      361 apllvftaae thlllaeaav rgwytatsae aeyksavtsg mkhwalfgsp giisdarina
      421 yiaanpykts gsveeqfeqi gtqkwvalfl edeyeifsnw rrtgypkltp tnypgnltgg
      481 kiptrfvvpd seesynkdnf lesrtrqggt ntlssvvwwd k
//
LOCUS       WP_235151312             577 aa            linear   BCT 02-MAR-2025
DEFINITION  M14 family metallopeptidase [Dyadobacter sp. CY345].
ACCESSION   WP_235151312
VERSION     WP_235151312.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 577)
  AUTHORS   Makarova,K.S. and Grishin,N.V.
  TITLE     The Zn-peptidase superfamily: functional convergence after
            evolutionary divergence
  JOURNAL   J Mol Biol 292 (1), 11-17 (1999)
   PUBMED   10493853
REFERENCE   2  (residues 1 to 577)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10154684
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..577
                     /product="M14 family metallopeptidase"
                     /EC_number="3.4.17.-"
                     /GO_function="GO:0004181 - metallocarboxypeptidase
                     activity [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=66912
     Region          87..301
                     /region_name="M14-like"
                     /note="Peptidase M14-like domain; uncharacterized
                     subgroup; cd06241"
                     /db_xref="CDD:349460"
     Site            order(97,100,160,169..170,199..200,205,287)
                     /site_type="active"
                     /db_xref="CDD:349460"
ORIGIN      
        1 mqkfllslll listvslaqy qtrfeksggk etptyeegia yykllaknfp eiqitekglt
       61 dsgkplslvl ysknksfdik klktqgkail finnaihpge pdgvdasmll lrdiathpek
      121 fpeldsvvla iipfynigga lnrnsttrtn qdgpveygfr gnarhydlnr dfikndtrna
      181 ksfaaifhel dpdlfadthv sngadyqyvm tldyaqqdkl ggslgkfhke tflpfmyqfl
      241 kdagfeatpy vntfgqtpdk gftqfpdwpr ystgyaalfh tigvmtethm lkpydqrvka
      301 tyaylhgnlk vlakyrkqil qmrnetkeav ktqekfavtw qnnkekftei dfkgyqpeyf
      361 pskisgkdrl hynrskplnv kvpfydtyep ldivskptay iipqgwfnvi ellklnqvrm
      421 tpiekdgele vevyyiqsyd apktpyeghy whtntelrte kkkvkfrkgd wyipvnqwtn
      481 ryivetlepk avdsffkwnf fdsilqakeg yssyvfedla aellskspel qqkleekrks
      541 ddafaksgda qlrfiyensp hrekeymryp vfrvvek
//
LOCUS       WP_235151332             354 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme [Dyadobacter sp.
            CY345].
ACCESSION   WP_235151332
VERSION     WP_235151332.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..354
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /calculated_mol_wt=39632
     Region          6..342
                     /region_name="PucG"
                     /note="Archaeal aspartate aminotransferase or a related
                     aminotransferase, includes purine catabolism protein PucG
                     [Amino acid transport and metabolism, Nucleotide transport
                     and metabolism]; COG0075"
                     /db_xref="CDD:439845"
ORIGIN      
        1 mitfypgpsk vypqveqyls dayqsgilsv nhrsepfmvm lketievmks kldipeayei
       61 yfcssatecw eiiaqsliat kslhlhngaf gekwleytqk ikpkskgfsf dknslpiisd
      121 iisdqedevi clthnetsng talpfsffte lreqtsqvia vdatssiagv efpweaadvw
      181 yasvqkcfgl paglsvlias praiklaeki gdrdfynsfl fvrdnflkyq tpytpnalgi
      241 ylagrvmrqv epiasiskqt kkraaewyef laengysili deqevrsdtv iavsgskdqv
      301 anlkksaken gillgngyga wkettfrian fpaitqneid qlknflksea nrla
//
LOCUS       WP_235151357             442 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235151357
VERSION     WP_235151357.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 442)
  AUTHORS   Gao,G., Nara,T., Nakajima-Shimada,J. and Aoki,T.
  TITLE     Novel organization and sequences of five genes encoding all six
            enzymes for de novo pyrimidine biosynthesis in Trypanosoma cruzi
  JOURNAL   J Mol Biol 285 (1), 149-161 (1999)
   PUBMED   9878395
REFERENCE   2  (residues 1 to 442)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
REFERENCE   3  (residues 1 to 442)
  AUTHORS   Nygaard,P., Duckert,P. and Saxild,H.H.
  TITLE     Role of adenine deaminase in purine salvage and nitrogen metabolism
            and characterization of the ade gene in Bacillus subtilis
  JOURNAL   J Bacteriol 178 (3), 846-853 (1996)
   PUBMED   8550522
REFERENCE   4  (residues 1 to 442)
  AUTHORS   Lollier,M., Jaquet,L., Nedeva,T., Lacroute,F., Potier,S. and
            Souciet,J.L.
  TITLE     As in Saccharomyces cerevisiae, aspartate transcarbamoylase is
            assembled on a multifunctional protein including a
            dihydroorotase-like cryptic domain in Schizosaccharomyces pombe
  JOURNAL   Curr Genet 28 (2), 138-149 (1995)
   PUBMED   8590465
REFERENCE   5  (residues 1 to 442)
  AUTHORS   Jabri,E., Carr,M.B., Hausinger,R.P. and Karplus,P.A.
  TITLE     The crystal structure of urease from Klebsiella aerogenes
  JOURNAL   Science 268 (5213), 998-1004 (1995)
   PUBMED   7754395
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01979.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..442
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=48402
     Region          66..422
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
     Site            order(101,103,259,285,341)
                     /site_type="active"
                     /db_xref="CDD:238617"
ORIGIN      
        1 mkinnyikql aslsslavmf cltfsvqaqn papakaqakp tvltggtihl gngqviengv
       61 iafdkglith vgaagsntsn anaevidikg khvfpgiism nttvgiqeia svratldyae
      121 vgdinphvrs lvayntdsev iptlrnagil lsqavpqggi vsgsssvfys dgwnwedavl
      181 kkddgiwinw ppflatsfny edfstsvkrn ekrqetidlf rttfadakgy yetgkpatvn
      241 mrleamkdlf ngkanlyira eyakdiiesv kfaqefglkk ivivggdqan kitgflkehn
      301 ipvvlnaahr lpngtdenvy lpyempgilh kagvkvaity aeewwrtrni aylagtssgf
      361 sdvtpeqalq fitknpaeim gidqyvgtle kgkhasfvvt sgdmldmrgn avqmafikgg
      421 kvnlddkqkr lyekykekyg qr
//
LOCUS       WP_235151439             466 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase RNA specificity domain-containing
            protein [Dyadobacter sp. CY345].
ACCESSION   WP_235151439
VERSION     WP_235151439.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 466)
  AUTHORS   Roux,C.M., DeMuth,J.P. and Dunman,P.M.
  TITLE     Characterization of components of the Staphylococcus aureus mRNA
            degradosome holoenzyme-like complex
  JOURNAL   J Bacteriol 193 (19), 5520-5526 (2011)
   PUBMED   21764917
REFERENCE   2  (residues 1 to 466)
  AUTHORS   Nishida,Y., Ishikawa,H., Baba,S., Nakagawa,N., Kuramitsu,S. and
            Masui,R.
  TITLE     Crystal structure of an archaeal cleavage and polyadenylation
            specificity factor subunit from Pyrococcus horikoshii
  JOURNAL   Proteins 78 (10), 2395-2398 (2010)
   PUBMED   20544974
REFERENCE   3  (residues 1 to 466)
  AUTHORS   Mandel,C.R., Kaneko,S., Zhang,H., Gebauer,D., Vethantham,V.,
            Manley,J.L. and Tong,L.
  TITLE     Polyadenylation factor CPSF-73 is the pre-mRNA 3'-end-processing
            endonuclease
  JOURNAL   Nature 444 (7121), 953-956 (2006)
   PUBMED   17128255
REFERENCE   4  (residues 1 to 466)
  AUTHORS   Callebaut,I., Moshous,D., Mornon,J.P. and de Villartay,J.P.
  TITLE     Metallo-beta-lactamase fold within nucleic acids processing
            enzymes: the beta-CASP family
  JOURNAL   Nucleic Acids Res 30 (16), 3592-3601 (2002)
   PUBMED   12177301
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019159.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07521.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..466
                     /product="MBL fold metallo-hydrolase RNA specificity
                     domain-containing protein"
                     /calculated_mol_wt=52257
     Region          1..466
                     /region_name="COG1782"
                     /note="Predicted metal-dependent RNase, contains
                     metallo-beta-lactamase and KH domains [General function
                     prediction only]"
                     /db_xref="CDD:441388"
ORIGIN      
        1 mriqffgaar tvtgskhlvt tekgtkilld cglfqgiqtd efnqefgfkp aevdylvlsh
       61 ahidhsglip rlvrkgfsgp ifctaatadl crimlmdsah iqvkdlerin rrrerqgrpl
      121 leelyngeda ekalsllrav qynqtfhlgt dnevavfftd aahilgsaav hlsipdkgtf
      181 kkltftgdig rpedhilrkp drfpqadfii cestygdklh eketdmqahl lrvvhetcve
      241 rkgkviipaf aidrtqeliy aldqlsssgk lpridvyids plairatkim keheecfnpe
      301 ileyiekdgd afafpnlhyi sdvsesialn dskepciiis asgmaeagri khhiknnind
      361 pnstillvgy aspntlagal krgddevnif gemypvkaqv evmdsfsahg dynemlqfls
      421 cqnpehvkkv flvhgeyetq vsfkiklera gfkdihipal yesvei
//
LOCUS       WP_235151481             262 aa            linear   BCT 02-MAR-2025
DEFINITION  NIPSNAP family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235151481
VERSION     WP_235151481.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 262)
  AUTHORS   Seroussi,E., Pan,H.Q., Kedra,D., Roe,B.A. and Dumanski,J.P.
  TITLE     Characterization of the human NIPSNAP1 gene from 22q12: a member of
            a novel gene family
  JOURNAL   Gene 212 (1), 13-20 (1998)
   PUBMED   9661659
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019590.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07978.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..262
                     /product="NIPSNAP family protein"
                     /calculated_mol_wt=29921
     Region          157..260
                     /region_name="NIPSNAP"
                     /note="cl46801"
                     /db_xref="CDD:481141"
ORIGIN      
        1 mnkpqkrtfl lsllmlalsi asiaaapkre fyeikmyhlk dktqeaavea flkdayipal
       61 hragikdvgv fkpvpsdtms gkliyvftpl ssldqlltlp klldkdskyl eagkdyleap
      121 fknppyvrie ttilqaftsm pvhskpklsa pkservyemr syeghterry qnkvkmfndg
      181 geiplfvrlg fnavfygevi agshqpnlmy mttfenkadr dahwksfsdd aewgklkvnp
      241 eyqnnvsknt sfymypteys di
//
LOCUS       WP_235151500             373 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235151500
VERSION     WP_235151500.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024918.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13528.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..373
                     /product="glycosyltransferase family protein"
                     /calculated_mol_wt=42429
     Region          1..329
                     /region_name="Glyco_trans_1_3"
                     /note="Glycosyl transferase family 1; cl26153"
                     /db_xref="CDD:421271"
ORIGIN      
        1 mrilflvqge grghltqais mgqilrnagh eisgvmvgsa vgreipsfft eqikaqvyyf
       61 napsivyngg gmntkktlls lvtnlptyvk slhyihktir giqpdliisf yetysglyni
      121 vfgnkipmvc vahqylilhp dftspkdsrl nralinlnsk aaswkasqrl alsfremesr
      181 pdeklivvpp llrqeiqdlh pvtddfflvy mthhslseqi iswhrthpei rlhcfwdkad
      241 apdelihdst lsfhrinsqk yltklascra lvttagfesv ceamylgkpv mmvpvpnhye
      301 qecnaldgvi sgagvtsktf nlsvlldylp hhidqsqkfr hwyhrgnemf vknvevfdkh
      361 sskkpytetf tfs
//
LOCUS       WP_235151508             508 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Dyadobacter sp. CY345].
ACCESSION   WP_235151508
VERSION     WP_235151508.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 508)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..508
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=54882
     Region          112..221
                     /region_name="PA"
                     /note="Protease-associated (PA) domain. The PA domain is
                     an insert domain in a diverse fraction of proteases. The
                     significance of the PA domain to many of the proteins in
                     which it is inserted is undetermined. It may be a
                     protein-protein interaction domain. At...; cl28883"
                     /db_xref="CDD:333703"
     Region          262..488
                     /region_name="Iap"
                     /note="Zn-dependent amino- or carboxypeptidase, M28 family
                     [Posttranslational modification, protein turnover,
                     chaperones, Amino acid transport and metabolism]; COG2234"
                     /db_xref="CDD:441835"
ORIGIN      
        1 mkkstlllis tsllfnvsaf aqkkaalppe fnikqsetea hirflagdel mgrrtgeqgn
       61 fvaaryiaeq frksgvvpvp gntasgtsgy yqnvpfekig sngageiiad aenlksgedw
      121 ilmngettdl taplvyasyg lenstkgwdd ykgldvkgki vllqsgtpdv qtpseiiass
      181 aekrkiaaek gaiaiielfn apmpwnmvnr yfageriala dsksdlksip hawvngkeak
      241 itralrgaqn vtfkssgrks qlvnsynvag yikgsdpvlk deyvlltahy dhvgvgkqgg
      301 qpftsedsif ngardnafgt valltaaeal aknppkrsvl ivaltaeevg llgsryyaah
      361 pllplnkcil nlnsdgagyn dttivsvmgl nrtgvkteie taskafglgv fadpspeqgl
      421 fdrsdnvnfa kegipaptft pgfkefngdi mknyhqvsdn petvdfgyll kfcqaytytv
      481 rlvadrktap qwiagdkyea aakklygk
//
LOCUS       WP_235151521             327 aa            linear   BCT 02-MAR-2025
DEFINITION  1-acyl-sn-glycerol-3-phosphate acyltransferase [Dyadobacter sp.
            CY345].
ACCESSION   WP_235151521
VERSION     WP_235151521.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 327)
  AUTHORS   Neuwald,A.F.
  TITLE     Barth syndrome may be due to an acyltransferase deficiency
  JOURNAL   Curr Biol 7 (8), R465-R466 (1997)
   PUBMED   9259571
REFERENCE   2  (residues 1 to 327)
  AUTHORS   Bione,S., D'Adamo,P., Maestrini,E., Gedeon,A.K., Bolhuis,P.A. and
            Toniolo,D.
  TITLE     A novel X-linked gene, G4.5. is responsible for Barth syndrome
  JOURNAL   Nat Genet 12 (4), 385-389 (1996)
   PUBMED   8630491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013702.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01553.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..327
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /GO_function="GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=37014
     Region          8..208
                     /region_name="LPLAT"
                     /note="Lysophospholipid acyltransferases (LPLATs) of
                     glycerophospholipid biosynthesis; cl17185"
                     /db_xref="CDD:473073"
     Site            order(42,45,48,64..67,122..124)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153244"
ORIGIN      
        1 myffyfsrfl irlalpiflr rllvinfkqv pnkgplllas nhpdsffdal vigatltqpi
       61 ftlargdafk kpsvafwlrq inlipvfrgs egrlavknid ttmkesldam sagnaviifs
      121 egvcvnewkl rplgkgtarm ahqawfgesn lkemqvipig mnyehyrgtg kraairfgda
      181 ihhtdiktsp ddyekwlref neilyvkmnq eiltipdnat keervsafnn ffgpnsvpsk
      241 gnfllqglgw fgrlihrpiy qifhkkvaki tarsvfydsa lfglllyiyp livllisaiv
      301 gifagfkval avfaalpila wmgnryr
//
LOCUS       WP_235151526             402 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3570 domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235151526
VERSION     WP_235151526.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 402)
  AUTHORS   Meheust,R., Huang,S., Rivera-Lugo,R., Banfield,J.F. and Light,S.H.
  TITLE     Post-translational flavinylation is associated with diverse
            extracytosolic redox functionalities throughout bacterial life
  JOURNAL   Elife 10, e66878 (2021)
   PUBMED   34032212
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023516.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12094.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..402
                     /product="DUF3570 domain-containing protein"
                     /calculated_mol_wt=46644
     Region          <91..390
                     /region_name="DUF3570"
                     /note="Protein of unknown function (DUF3570); pfam12094"
                     /db_xref="CDD:432326"
ORIGIN      
        1 mkrkfllagi lsafllqska qnadssyqks tlsktevelv ynhyiqdghn savtggigte
       61 kltvyspsvr ightfkeynt lrfvggvdiv ssasadnidf vmssaskrda rsygnlnyqr
      121 qlkkrdlklg igsgfsiesd ylsipifasa eytnptktrt ysfdfqayfd dmrwgrldpd
      181 hyrpvkliyp velrnrqwfd tyrrdsynfk lgftqiinpr lvlgifpefs yqkgllstpf
      241 hrvyfkdnsl kvenlpqdry kfpvstrlny fmgsrtilkl nygfyydsfd ilgnslelea
      301 aiktspqwti spffrfykqs gseyfkaykq heisakfyts dydlasfqsy kaginlrylp
      361 sayltkrisf delnlrygyy hrsnglnahm vtlaikfvre kh
//
LOCUS       WP_235151530             136 aa            linear   BCT 02-MAR-2025
DEFINITION  FtsL-like putative cell division protein [Dyadobacter sp. CY345].
ACCESSION   WP_235151530
VERSION     WP_235151530.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039650.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19579.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..136
                     /product="FtsL-like putative cell division protein"
                     /calculated_mol_wt=15974
     Region          50..136
                     /region_name="FtsL_2"
                     /note="Bacteriodetes cell division protein (FtsL-like);
                     pfam19579"
                     /db_xref="CDD:466122"
ORIGIN      
        1 maenkrrpki apekppkppr eyslfnwlnr flpldkifgd kvpgqeervp vkyfyyfgwi
       61 villvvyeri gfqseeyvrn siklkkevdd lraeytsiqa eymksgkqsv viekvkpdgl
      121 eenlnppkki vlkkee
//
LOCUS       WP_235151585             483 aa            linear   BCT 02-MAR-2025
DEFINITION  amino acid permease [Dyadobacter sp. CY345].
ACCESSION   WP_235151585
VERSION     WP_235151585.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..483
                     /product="amino acid permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=52185
     Region          25..473
                     /region_name="2A0306"
                     /note="amino acid transporter; TIGR00909"
                     /db_xref="CDD:129987"
ORIGIN      
        1 manqlwvkkp ieklmlessg egnelkrsls stslialgig aiigaglfsl tgiaaaehag
       61 pavtisfila avgcgfaglc yaefasmipi agsaytysya tmgefvawii gwdlvleyal
      121 gaatvsvsws rylleflssf gihlpsqlvc spyevvklsd gtiidngivn lpailiiwvl
      181 slllirgtqg saflnnilvc vkvavvlvfi algwshidpq nyvpyipent gnyenfgwsg
      241 iatgaavvff afigfdavst aaqeaknpqk gmpigilgsl victllyvlf ahvmtglvky
      301 tefandakpa atafaktgyd tlqtgliiai lagytsvmlv mllgqsrvfy smsrdgllpk
      361 ffsavhpkfs tpwktnlffm ifvslfsglv pvsdlghmvs igtlfafclv cvgvwmlrvk
      421 rpdlkrsfrt plvpfvpimg ivvclylmys lpieswyrla iwlalglavy fgygrknskl
      481 sne
//
LOCUS       WP_235151606             335 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6089 family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235151606
VERSION     WP_235151606.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039345.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19573.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..335
                     /product="DUF6089 family protein"
                     /calculated_mol_wt=37365
     Region          12..232
                     /region_name="DUF6089"
                     /note="Domain of unknown function (DUF6089); pfam19573"
                     /db_xref="CDD:437405"
ORIGIN      
        1 mikdfqmrpi skklvfflil gllvinykte aqvrrgtfip yssagfgigt ssyygdmasy
       61 ttplrstfgm mrwsvtgnyt rhftprlaar asftyarivg ddyemnkkdp tnirfprnls
      121 frndlkefav vgiykltpds rsydrrpqfg aylfggiaav ahnpkakddt tdewvklqal
      181 gtegqgrpgy akaysliqma ipigigvryk insrfdigae lgfrftftdy lddvagtyad
      241 psifaadpla lkfsnrslep tstrkgkdrt pglieyvkaa ynidtndpya alqsqnygsv
      301 gnergfnakg ndnyltgtis vhyiipsqik cpplk
//
LOCUS       WP_235151630             727 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2231 domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235151630
VERSION     WP_235151630.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021505.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09990.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..727
                     /product="DUF2231 domain-containing protein"
                     /calculated_mol_wt=81653
     Region          41..185
                     /region_name="COG4244"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:443386"
     Region          212..271
                     /region_name="PSCyt1"
                     /note="Planctomycete cytochrome C; pfam07635"
                     /db_xref="CDD:429568"
     Region          507..564
                     /region_name="Fn3_assoc"
                     /note="Fn3 associated; pfam13287"
                     /db_xref="CDD:463829"
ORIGIN      
        1 mesasqpngr sfsswkgwiy nfafflngll iflllfenrf vvpvwmqslg rmhplvlhfp
       61 lvvlmlyafw ilivekkess rwnedladil lligivtaai aafsgfvlsr edgyekdalf
      121 whkwlgiais icsiiwysyk kylppwkipa klisvslllm lligghlggn ithgedflta
      181 pmqlavvend kvtfeeanvy tdlvepileq kcischneqk akgnlqmqtk elfakggkeg
      241 tpwdttkadl gvlltrvhlp lddkkhmppr gkapltddei alleawikgg srfdemvksv
      301 spqnpiysya qnvlagaeae ekydfsaasp dkikklnsty rliksvaaes palavnfynr
      361 anfksediaa laplkeqiia mdlskmpvkd edlktisqft elrklilnft dingstlpel
      421 kkltklksls isgtkvklpq iqalseipal knvfvwntdl tkqemltlkk sskisyetgf
      481 agdtvvlnln ppivenedpi lagntlirmk hqipgtviry sldgkepdst tseiynkpfa
      541 vtqntkliak afkkgwygsk pvekfffkst yrpdsvrlit kadlkypaqg nktlndgvks
      601 destssgkwl gylnqdlqay lyfknpvkaq svtlsmlrni gsyifppvrl evwggtdekq
      661 mkllkvitpe mpvkatknse nlvydftfpp qeisclkvva kplaklpswh pgkgqkawvf
      721 mdevfvn
//
LOCUS       WP_235151682             841 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase [Dyadobacter sp. CY345].
ACCESSION   WP_235151682
VERSION     WP_235151682.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 841)
  AUTHORS   Miyata,T., Kashige,N., Satho,T., Yamaguchi,T., Aso,Y. and Miake,F.
  TITLE     Cloning, sequence analysis, and expression of the gene encoding
            Sphingomonas paucimobilis FP2001 alpha-L -rhamnosidase
  JOURNAL   Curr Microbiol 51 (2), 105-109 (2005)
   PUBMED   15991055
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17132.9
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..841
                     /product="glycosyl hydrolase"
                     /calculated_mol_wt=94527
     Region          22..>120
                     /region_name="Glyco_hydro_106"
                     /note="alpha-L-rhamnosidase; pfam17132"
                     /db_xref="CDD:435739"
     Region          <126..632
                     /region_name="Glyco_hydro_106"
                     /note="alpha-L-rhamnosidase; pfam17132"
                     /db_xref="CDD:435739"
     Region          704..>791
                     /region_name="LacZ"
                     /note="Beta-galactosidase/beta-glucuronidase [Carbohydrate
                     transport and metabolism]; COG3250"
                     /db_xref="CDD:442481"
ORIGIN      
        1 mrsilllvlf ffclpghgqt istskpwtyw wwmgsavtqe ditaqlegfs kaglggvhii
       61 piygvkgyen dfvpfltdhw lkvmehtvie akrlglgvdm ttgtgwpfgg pnvtkqmaak
      121 tinfkdgkwk ilptkqevkr aapggeglvf dpfhptamad ylvrfdsafv hakelprsmy
      181 mdsyeaygan wtddflrefk krrgydlqne palltdstgk sesllvkidy hqtlsellre
      241 ryahawtsws kqkgfltryq ahgspgnlle lydeadipet esfgtsrfgi pglridpdys
      301 ikqfgtpnpl amkfassaah fsgkklvsse tgtwlanhfk vslsqvkpqi delftsginh
      361 ifyhgttysp vkeaypgwlf yastnfgpas hfaehfslln qyvercqkll qesqpdndil
      421 vyfpihdlws tpaksaggvh llevhhvdrw llqlpfgqlt tklwkegyaf dyvsdrqfsr
      481 lsatkngdvs sgksiyktil ippstympee tlneltrlak sganiifadh fpanvtgynl
      541 ngtrqkefvt klselkakna gvvvskdwei alqkhgvvqe qwakqgltfi rkksgdhsiy
      601 fianlangfr egwihigklt gkverydplt delitlatrt ekgksevflk llpgescflr
      661 tsgqsmeivp askpekqysi dgnwavdfvk gkpslpasgk lkkagswvsl sdtaryfsgt
      721 aryaldfdvp agllssksii ldlgdvreva avklngeeig tawsipfhlk vipetlkekg
      781 nkieievtnl sanymrlrdk qapewkkfyd inivditykk fnadnwepmp sgllgpirll
      841 y
//
LOCUS       WP_235151742             130 aa            linear   BCT 02-MAR-2025
DEFINITION  barstar family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235151742
VERSION     WP_235151742.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 130)
  AUTHORS   Buckle,A.M., Schreiber,G. and Fersht,A.R.
  TITLE     Protein-protein recognition: crystal structural analysis of a
            barnase-barstar complex at 2.0-A resolution
  JOURNAL   Biochemistry 33 (30), 8878-8889 (1994)
   PUBMED   8043575
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013500.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01337.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..130
                     /product="barstar family protein"
                     /calculated_mol_wt=14931
     Region          7..94
                     /region_name="Barstar_like"
                     /note="Barstar is an intracellular inhibitor of barnase,
                     an extracellular ribonuclease of Bacillus
                     amyloliquefaciens. Barstar binds tightly to the barnase
                     active site and sterically blocks it, thus inhibiting its
                     potentially lethal RNase activity inside the...; cl01048"
                     /db_xref="CDD:470045"
     Site            order(33,35,37..39,43,84)
                     /site_type="other"
                     /note="RNAase interaction site [polypeptide binding]"
                     /db_xref="CDD:238273"
ORIGIN      
        1 mkkeifings svkdiatfye einrifmske dwtlgcslda fndllyggfg iikgkepikl
       61 vwldsnqsre algyqttkly yeeklkpnsr fnkemfqekl aalengtget yfdiilsiis
      121 ehenieldlk
//
LOCUS       WP_235151777             243 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4290 domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235151777
VERSION     WP_235151777.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14123.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..243
                     /product="DUF4290 domain-containing protein"
                     /calculated_mol_wt=28180
     Region          1..158
                     /region_name="DUF4290"
                     /note="Domain of unknown function (DUF4290); pfam14123"
                     /db_xref="CDD:433733"
ORIGIN      
        1 mkeygsnvqk ladhivkmed kvkrnlyahi lielmrqihp nmrdnqdytn klwddlyiis
       61 gfkldvdspf pppspeslgk kpltvgynqh nlmyrhygrn idlllqkaiq teneedrlaf
      121 vsyvfrlmrs ffntwnkdnp edhvligqle lltkgqlkee idyirkngpv daapkdrnsn
      181 qdrnrgnhsg ggfkaqpsqe rqgpnnqnnn nrnrpnnkfa grnnnnntnn nrnnnnnrkk
      241 pgi
//
LOCUS       WP_235151808             486 aa            linear   BCT 02-MAR-2025
DEFINITION  SusD/RagB family nutrient-binding outer membrane lipoprotein
            [Dyadobacter sp. CY345].
ACCESSION   WP_235151808
VERSION     WP_235151808.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 486)
  AUTHORS   Koropatkin,N., Martens,E.C., Gordon,J.I. and Smith,T.J.
  TITLE     Structure of a SusD homologue, BT1043, involved in mucin O-glycan
            utilization in a prominent human gut symbiont
  JOURNAL   Biochemistry 48 (7), 1532-1542 (2009)
   PUBMED   19191477
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024181.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12771.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..486
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /calculated_mol_wt=53771
     Region          32..450
                     /region_name="SusD-like_2"
                     /note="Starch-binding associating with outer membrane;
                     pfam12771"
                     /db_xref="CDD:463695"
ORIGIN      
        1 mkkissyilc lgllgfsaqs ctnefedint npnspveapi tnvlayviqd faanyfdawg
       61 nmnepetysg hlgkiqyvde arymyrsgti sdlwkkvyrd lknaqavidq adktqatnmk
      121 aagmtiqayi gqiatdrwrd mpyteaikgd qgfitpkydk qediypllia qlktaadlfa
      181 aggtdplgeg dllyagnvan wqkfcnslrl rvairisgin palsksiiee iaanptkypv
      241 fssntdnaff nwvgtspyie pwnndfrsrd dhgpsaplin tlttlndprl pvyakpapdd
      301 nvyrgveigp issptisrfs rigvrfrena agfspfmrys evlfimseaa lkgwnvggqt
      361 aeklyesavt aslqengitd aavitkylng tgvkwdgttt klytqkwlal fkdgheawae
      421 srrtdvpllp aasgspfpgh trppfrypyp aeettlngan saasvadvkd nlwgkqmwwd
      481 trtgvn
//
LOCUS       WP_235151857             235 aa            linear   BCT 02-MAR-2025
DEFINITION  thioredoxin domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235151857
VERSION     WP_235151857.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012314.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00085.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..235
                     /product="thioredoxin domain-containing protein"
                     /calculated_mol_wt=26136
     Region          22..120
                     /region_name="PspE"
                     /note="Rhodanese-related sulfurtransferase [Inorganic ion
                     transport and metabolism]; COG0607"
                     /db_xref="CDD:440372"
     Region          137..235
                     /region_name="CnoX"
                     /note="Chaperedoxin CnoX, contains thioredoxin-like and
                     TPR-like domains, YbbN/TrxSC family [Posttranslational
                     modification, protein turnover, chaperones]; COG3118"
                     /db_xref="CDD:442352"
ORIGIN      
        1 mksilisflg illtasmava qtqlstndfq nklnatkqaq lldvrtpeef sqghlesaen
       61 fdyknaafkd qiekldknkp vfvyclsggr ssaaakvlse kgftdvyemq ggfmkwtssg
      121 klidapkdag avnkgmssad fkelinsdkl vmvdfyapwc apcikmlptv hklaeeyksk
      181 anietihydq nkalakelgi deipaflfyk kgklilrkng lmeeaefkkl ieeni
//
LOCUS       WP_235151881             364 aa            linear   BCT 02-MAR-2025
DEFINITION  chorismate mutase [Dyadobacter sp. CY345].
ACCESSION   WP_235151881
VERSION     WP_235151881.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 364)
  AUTHORS   Schnappauf,G., Krappmann,S. and Braus,G.H.
  TITLE     Tyrosine and tryptophan act through the same binding site at the
            dimer interface of yeast chorismate mutase
  JOURNAL   J Biol Chem 273 (27), 17012-17017 (1998)
   PUBMED   9642265
REFERENCE   2  (residues 1 to 364)
  AUTHORS   Zhang,S., Pohnert,G., Kongsaeree,P., Wilson,D.B., Clardy,J. and
            Ganem,B.
  TITLE     Chorismate mutase-prephenate dehydratase from Escherichia coli.
            Study of catalytic and regulatory domains using genetically
            engineered proteins
  JOURNAL   J Biol Chem 273 (11), 6248-6253 (1998)
   PUBMED   9497350
REFERENCE   3  (residues 1 to 364)
  AUTHORS   Xue,Y., Lipscomb,W.N., Graf,R., Schnappauf,G. and Braus,G.
  TITLE     The crystal structure of allosteric chorismate mutase at 2.2-A
            resolution
  JOURNAL   Proc Natl Acad Sci U S A 91 (23), 10814-10818 (1994)
   PUBMED   7971967
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013939.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01817.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..364
                     /product="chorismate mutase"
                     /EC_number="5.4.99.5"
                     /GO_process="GO:0046417 - chorismate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=40689
     Region          17..259
                     /region_name="AroGA"
                     /note="3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP)
                     synthase [Amino acid transport and metabolism]; COG2876"
                     /db_xref="CDD:442123"
     Region          269..>364
                     /region_name="PheA"
                     /note="Chorismate mutase [Amino acid transport and
                     metabolism]; COG1605"
                     /db_xref="CDD:441213"
ORIGIN      
        1 mnasldilpl sswintegkp lviagpcsae teeqmletas qikkegfahv lragiwkprt
       61 rpgsfegmge aalpwlqaak ketglpvaie vanpqhiela lkygvdilwv garttvnpfn
      121 vqelaealrg vdvpvlvknp vnpdlqlwig alerlnqagv kklgaihrgf snaqetkyrn
      181 spmwniaiel ktlfpelpvi gdpshmagkr sllfeiaqra ldlnydglii eshrdpdkaw
      241 sdasqqltpp alaemlhelh vrkesyptdy qsqlevvrgk idnldrelle nlanrmslve
      301 klaeykrdnn vaayqvdrfr evldtraawg kslnlypalv delfklvhme sirkqtevmn
      361 qina
//
LOCUS       WP_235151899             517 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase HerA-like domain-containing protein [Dyadobacter sp.
            CY345].
ACCESSION   WP_235151899
VERSION     WP_235151899.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 517)
  AUTHORS   Huang,Q., Liu,L., Liu,J., Ni,J., She,Q. and Shen,Y.
  TITLE     Efficient 5'-3' DNA end resection by HerA and NurA is essential for
            cell viability in the crenarchaeon Sulfolobus islandicus
  JOURNAL   BMC Mol Biol 16, 2 (2015)
   PUBMED   25880130
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 517)
  AUTHORS   Rzechorzek,N.J., Blackwood,J.K., Bray,S.M., Maman,J.D.,
            Pellegrini,L. and Robinson,N.P.
  TITLE     Structure of the hexameric HerA ATPase reveals a mechanism of
            translocation-coupled DNA-end processing in archaea
  JOURNAL   Nat Commun 5, 5506 (2014)
   PUBMED   25420454
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 517)
  AUTHORS   Constantinesco,F., Forterre,P., Koonin,E.V., Aravind,L. and Elie,C.
  TITLE     A bipolar DNA helicase gene, herA, clusters with rad50, mre11 and
            nurA genes in thermophilic archaea
  JOURNAL   Nucleic Acids Res 32 (4), 1439-1447 (2004)
   PUBMED   14990749
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017669.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05872.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..517
                     /product="helicase HerA-like domain-containing protein"
                     /calculated_mol_wt=56123
     Region          36..504
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 mskreqfiaa iqksyktdkp aihlgsaild geiiteakvn lplrmmnrhg lvagatgsgk
       61 trtlqvlaeq lsaagvpvfm sdikgdlsgi akpgtsnaai eersailgtp feakgfpvel
      121 yslsgekgaq mratilefgp illskifeln dtqsgvlail fkyaddkklp mvdlndlkkv
      181 lsylsegpga aeiksdygsi ssstagtilr kivaleqqgv gtifgeksfd isdlinkvdg
      241 qgiisllnis dvqdkpalfs tfmlsllael yqtlpeagdl dkpklvffld eahllfkdap
      301 kafldqieqv vrlirskgvg iffctqmaqd ipvsvlsqlg nrvqhvlraf tpqdadalkq
      361 tvktyprsdy ysidqvlttl gigqalitvl ndkgipteva athllpptsv mgpltqadye
      421 nhvrqsdvyl kykdpidpes ayeiltkrle eqtrqeaelk eqttvaktgg kqekgmfeea
      481 lasplakqig revvrgvfgm lfgkstsrsk kgglfgf
//
LOCUS       WP_235151947             952 aa            linear   BCT 02-MAR-2025
DEFINITION  triple tyrosine motif-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235151947
VERSION     WP_235151947.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019136.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07495.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..952
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..952
                     /product="triple tyrosine motif-containing protein"
                     /calculated_mol_wt=110310
     Region          58..885
                     /region_name="COG3292"
                     /note="Periplasmic ligand-binding sensor domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:442521"
     Region          896..945
                     /region_name="HTH_CRP"
                     /note="helix_turn_helix, cAMP Regulatory protein
                     C-terminus; DNA binding domain of prokaryotic regulatory
                     proteins belonging to the catabolite activator protein
                     family; cl46859"
                     /db_xref="CDD:481199"
ORIGIN      
        1 miflvekgeg fftpfyyhil khkhrlngvl llllvlfsga faqetpplvn fpntiykahn
       61 qnwaidqskd hivytansdg lleydgaawk lypfpnrqiv ravlcdtmpn gesriyvggy
      121 sefgywkktt ngqliyhsls kaanfkslqt eeiwhilkdg kniyfqsfar iyrydgkrit
      181 elktkdnfmf mrnvrgrlyv hflnkgiyel ignkfvilkg seffastvvs silpfsgnkv
      241 litttrhglf iyengkftew kiplaeelkq niinkavils idssyafgti skglyvvdkn
      301 gnlkfhfrke nglqnntils lfedrsqhlw lgldqgidli klaspfisyq tndnplgsty
      361 aaavwkgnly vgsnngvfvk kwmsiepfra irglegqtwt lkvvngqllc ghndatfrie
      421 engitkisav nggwqflpvv tktdtillqg sytglhiykk drtglwtyqf pikgfppvpa
      481 kqivrtqdgs fwiahayrgl yhvilnpald sviswkayka ptdipsefat eitpwqenvl
      541 vrsgnnfftp nkqdklipyk nlggkedeef kirsgvdndw fkiypnriif hgnndprtlq
      601 lslvrnseti iplanhyyff cldngyalyn rrqdeqpfli plrpvirkvl nlrnlgemfk
      661 ttdettlpid vrsvrivyal pvfgqdvqyk yrlkglseqw sewtdksyve ytnlssdkyt
      721 feiktslnde vtayhftvtp ywyetvwarl ifvllaaall tgiiifqekr lvrhrqklle
      781 eqeeklrqqk linerriiei rnenlqseik nksqqlsnva invvkkneil qeirdelqqv
      841 kqelgqqlpn ihyqkllhsi ernvagkddw vlfeenfnev hdeffkrlkn vcpaispsel
      901 rlaaclrmnl sskemapvmg isvrgieikr yrlrkklnld ndlnlteymm dv
//
LOCUS       WP_235152051             214 aa            linear   BCT 02-MAR-2025
DEFINITION  TatD family hydrolase [Dyadobacter sp. CY345].
ACCESSION   WP_235152051
VERSION     WP_235152051.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 214)
  AUTHORS   Wexler,M., Sargent,F., Jack,R.L., Stanley,N.R., Bogsch,E.G.,
            Robinson,C., Berks,B.C. and Palmer,T.
  TITLE     TatD is a cytoplasmic protein with DNase activity. No requirement
            for TatD family proteins in sec-independent protein export
  JOURNAL   J Biol Chem 275 (22), 16717-16722 (2000)
   PUBMED   10747959
REFERENCE   2  (residues 1 to 214)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013213.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01026.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..214
                     /product="TatD family hydrolase"
                     /GO_function="GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /calculated_mol_wt=24022
     Region          <36..213
                     /region_name="TatD"
                     /note="3'->5' ssDNA/RNA exonuclease TatD [Cell motility];
                     COG0084"
                     /db_xref="CDD:439854"
ORIGIN      
        1 myynvhthph sesddvflie nlykhfdlet dgrklsmglh pwyldkdnls mqfddlaaya
       61 gkaevlaige cgldklsstd wglqlkafql qiklagdlnk pliihcvkaf nevlaelksv
      121 kvpvifhgin nklsivqpvi dagfylsfgk sllggnaail ntfkktpleq vfletddadi
      181 nireiyksaa eikeisekei vlqleknfln vfhn
//
LOCUS       WP_235152085             403 aa            linear   BCT 02-MAR-2025
DEFINITION  polysaccharide biosynthesis protein [Dyadobacter sp. CY345].
ACCESSION   WP_235152085
VERSION     WP_235152085.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 403)
  AUTHORS   Fallarino,A., Mavrangelos,C., Stroeher,U.H. and Manning,P.A.
  TITLE     Identification of additional genes required for O-antigen
            biosynthesis in Vibrio cholerae O1
  JOURNAL   J Bacteriol 179 (7), 2147-2153 (1997)
   PUBMED   9079898
REFERENCE   2  (residues 1 to 403)
  AUTHORS   Lin,W.S., Cunneen,T. and Lee,C.Y.
  TITLE     Sequence analysis and molecular characterization of genes required
            for the biosynthesis of type 1 capsular polysaccharide in
            Staphylococcus aureus
  JOURNAL   J Bacteriol 176 (22), 7005-7016 (1994)
   PUBMED   7961465
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014740.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02719.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..403
                     /product="polysaccharide biosynthesis protein"
                     /calculated_mol_wt=45509
     Region          55..335
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(59,61..64,84..85,112..114,135..137,139,154,177,193,
                     217..220,223..224)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187548"
     Site            order(85,87,91,95,110..113,116,119,137..140,143,147,150,
                     153,224..225,230)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187548"
     Site            order(139,179..181,189,218..219,225..227,230..231,
                     242..244,248,250,285,312,315)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:187548"
     Site            order(155,179,189,193)
                     /site_type="active"
                     /db_xref="CDD:187548"
ORIGIN      
        1 mtdfssneip qfnedfrksr yhqnllnfkl edlldreain ldnknisefi knkrilitga
       61 agsigrnlvk qiilfkpkrl ilidksesai yeldeeirem risgieivsf igdvsddkrm
      121 kplfqknqpq iifhaaankh vpllernaye aiktnifgtk vladlsvefw vekfilistd
      181 kavnpsnvmg vtkrfaeiil qnlnktnnst qfivtrfgnv lgtkgsvipa fkkqidkggp
      241 veithadvkr yfitmneacq lvleagatgh aneiftldmg elvllkalae kmirltglqp
      301 nddieiiyig lrpgeklvee rsgideedtp ahhpklrisr lavvdgfevg hvltqlekal
      361 dtgednemiq ilkdtipeyi shnsefekld ilravkaekn ite
//
LOCUS       WP_235152091             367 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Dyadobacter sp. CY345].
ACCESSION   WP_235152091
VERSION     WP_235152091.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 367)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 367)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..367
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=40774
     Region          18..367
                     /region_name="BioF"
                     /note="7-keto-8-aminopelargonate synthetase or related
                     enzyme [Coenzyme transport and metabolism]; COG0156"
                     /db_xref="CDD:439926"
ORIGIN      
        1 msiypashlp nrkvllnngk eylwfsgtdy lgmghhegfl nylhegilty gthygssrnn
       61 slrltvydet etalakfsga paalttssgm wagqlvvkel qgiikscfst envisprvhy
      121 hyaprvhpal wgesyevdns twedwgkktv ldiqesnhed ihilfsdsvg spfvehfnfs
      181 ifdnlpfdcq illvvddshg fgvlgqngtg iyrelsairq vqlivvssln kalgipggvi
      241 lceeriilgi rqspffagas paapayiyal kklletnayt pvhqrlleni hdvtarltgt
      301 nlfvcknnyp vfcsldsnlf dfletngila scfsypqptd ppvtrlvisa lhqkedldrl
      361 aevcikf
//
LOCUS       WP_235152116             250 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Dyadobacter sp. CY345].
ACCESSION   WP_235152116
VERSION     WP_235152116.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 250)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 250)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..250
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=26417
     Region          4..249
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(9,11..12,14,33..35,85..87,136..138,151,155,181..184)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187604"
     Site            order(110,138,151,155)
                     /site_type="active"
                     /db_xref="CDD:187604"
ORIGIN      
        1 msrialitga tsgigkatae afadagidli lcgrrqekle slvaelsdkv kvttllfdvr
       61 nkkavldava slpeewknid ilvnnagnah glgtldegdt edwdsmidgn vkgllyvska
      121 iiptliangk ghivnissva gkqtyingav ycaskaavev lsegmrlelt qhgikvtnva
      181 pgavetefsl vrfkgdeeka ekvyqgfdpl qasdiadmil yavkaparvt iadvtilaaa
      241 qsaattiyrk
//
LOCUS       WP_235152123             861 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphoenolpyruvate carboxylase [Dyadobacter sp. CY345].
ACCESSION   WP_235152123
VERSION     WP_235152123.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012532.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00311.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..861
                     /product="phosphoenolpyruvate carboxylase"
                     /EC_number="4.1.1.31"
                     /GO_function="GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /GO_process="GO:0015977 - carbon fixation [Evidence IEA]"
                     /calculated_mol_wt=98501
     Region          3..861
                     /region_name="PEPcase"
                     /note="Phosphoenolpyruvate carboxylase; cl21521"
                     /db_xref="CDD:451287"
ORIGIN      
        1 mnnsfqdvvv tkynifnslf lslpyrgifq tgsllplltq hsevgfqegk spkqiielff
       61 eellvtatak ertdllfafi qyierqvvlf dsvedaafdq thelngkgsv tyltdrldne
      121 slkqkllnkl edfsvrivlt ahptqfysgk vlgiindled sikvndftev nqlllqlgkt
      181 afinhekptp fdeavslcwf lenvyydaip ailvklingl gmsvhdwpyp nvfrlgfwpg
      241 gdrdgnpfvn adttiqvadr lretllrsyy rdirnlkrrl tfkgvedtis vaerkmnsti
      301 fgpteegynn aqelidelll arvvlvdkhq glfvelldnf ilklnlfgff fasldvrqds
      361 rkhgkawedi lkrlekkipl lkysdyenwe eskqidllls lniplrvedy edeltkdilg
      421 sikaiktiqg ingeqgahry visnntsaln vmqvvalakn liadesgylp ldvvplfetv
      481 ddlanapeim rtlytneyyk nhlskrenhq timvgfsdgt kdggylranw siyrakeelt
      541 kvsrefgikv tffdgrggpp argggnnhnf ysslgkdied keiqltvqgq tissnygtvt
      601 tamynlerlf taglenhlfr gdrkeeelsp edkelleema taaynsyldl knhpmfvkyl
      661 dkktplrfyg qtnigsrptk rgnddeglkf edlraipfvg swaqmkqnvp gfygfgtaiq
      721 elskngkkee ikdlykkslf frtliensmq slskaffpat kylrdeedyk efwdkmyaef
      781 kltldsllev seqkelldsn nvtkvsikir erivlpliti qqyalqmlae dpktlpvdve
      841 tynqlimram fgiinaarns a
//
LOCUS       WP_235152155             667 aa            linear   BCT 02-MAR-2025
DEFINITION  T9SS type A sorting domain-containing protein [Dyadobacter sp.
            CY345].
ACCESSION   WP_235152155
VERSION     WP_235152155.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 667)
  AUTHORS   Veith,P.D., Nor Muhammad,N.A., Dashper,S.G., Likic,V.A.,
            Gorasia,D.G., Chen,D., Byrne,S.J., Catmull,D.V. and Reynolds,E.C.
  TITLE     Protein substrates of a novel secretion system are numerous in the
            Bacteroidetes phylum and have in common a cleavable C-terminal
            secretion signal, extensive post-translational modification, and
            cell-surface attachment
  JOURNAL   J Proteome Res 12 (10), 4449-4461 (2013)
   PUBMED   24007199
REFERENCE   2  (residues 1 to 667)
  AUTHORS   Glew,M.D., Veith,P.D., Peng,B., Chen,Y.Y., Gorasia,D.G., Yang,Q.,
            Slakeski,N., Chen,D., Moore,C., Crawford,S. and Reynolds,E.C.
  TITLE     PG0026 is the C-terminal signal peptidase of a novel secretion
            system of Porphyromonas gingivalis
  JOURNAL   J Biol Chem 287 (29), 24605-24617 (2012)
   PUBMED   22593568
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039201.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18962.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..667
                     /product="T9SS type A sorting domain-containing protein"
                     /GO_component="GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /calculated_mol_wt=74718
     Region          <496..666
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          594..665
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mkknllsfff llllipgskp tfsqtigvaa fdklptdkql fardinkead itiagkiqaa
       61 gysyvsvvky rnkiragyqk galaysgsna pfsltskika elaeyafevy acksatdstl
      121 ivrrddvvag dfyiiygqsn avawevdyty rnefcrtfgs tangngfels navtprvgif
      181 giefqrrvae kykiptcvin galagasild ltnrnpnnha dastgygill nyaqqtgllp
      241 nlkgifywqg eaeaasddps vwaprfdklm vnlqedypmi ekmyvfqlpl fgggpyddri
      301 gafreqqrll nkkypiiqpy aalgapdwng fhyglegylq vgrdlaemag fyhygekeka
      361 tspsfqkafy stpnrdeitm vfedyqqmvy pndtinaniq gsqeafstys vkdffylnke
      421 wqklksgrae anrvivslkt vgndtlikyl pskyhhsglv sapwvyigpf lkntrgfraf
      481 afhhntinpy vdlgtltltg sepknnivln wnklpnvtgy ilerlhgkds lqtheiiyls
      541 kdqteysdps arkgeeytyq irgytdkses piaylkmikg sddvideama tinvypnpti
      601 dvinvvsasd kidrvdifss sgvkmetrty sgnewvslht nnlstgtyvl kihsgeksss
      661 hrvvvvk
//
LOCUS       WP_235152197             218 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleotidyltransferase [Dyadobacter sp. CY345].
ACCESSION   WP_235152197
VERSION     WP_235152197.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 218)
  AUTHORS   Kuchta,K., Knizewski,L., Wyrwicz,L.S., Rychlewski,L. and
            Ginalski,K.
  TITLE     Comprehensive classification of nucleotidyltransferase fold
            proteins: identification of novel families and their
            representatives in human
  JOURNAL   Nucleic Acids Res 37 (22), 7701-7714 (2009)
   PUBMED   19833706
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021487.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09970.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..218
                     /product="nucleotidyltransferase"
                     /calculated_mol_wt=24653
ORIGIN      
        1 mvyieisitl yyhqfskgms hsdlhtksqy senienfsrl nrlagklyrs nplnkklicm
       61 dissedvqql lkslndfkvk ylliggmagv vhghirttqd mdlwikndla ntkalvnals
      121 endvvgsdll lnmplifgyt svrfgmsgfe ldlghslkaf sesdfdacye ralqadldgi
      181 lfpviqlrdl itekeatgrs kdladieelq riweehns
//
LOCUS       WP_235152289             121 aa            linear   BCT 02-MAR-2025
DEFINITION  glyoxalase superfamily protein [Dyadobacter sp. CY345].
ACCESSION   WP_235152289
VERSION     WP_235152289.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040323.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19581.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..121
                     /product="glyoxalase superfamily protein"
                     /GO_process="GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /calculated_mol_wt=13879
     Region          5..120
                     /region_name="Glyoxalase_7"
                     /note="Glyoxalase superfamily protein; pfam19581"
                     /db_xref="CDD:437413"
ORIGIN      
        1 measkvipli rifdeakale fyvdwlgfti dwthrfgdnf plylqvsrdg ivlhltehhg
       61 dctpgskvfi ectglteyht ellemnyrfn rpgledapwn aktmevidpf gnkllfnesk
      121 g
//
LOCUS       WP_235152310             753 aa            linear   BCT 02-MAR-2025
DEFINITION  T9SS type A sorting domain-containing protein [Dyadobacter sp.
            CY345].
ACCESSION   WP_235152310
VERSION     WP_235152310.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 753)
  AUTHORS   Veith,P.D., Nor Muhammad,N.A., Dashper,S.G., Likic,V.A.,
            Gorasia,D.G., Chen,D., Byrne,S.J., Catmull,D.V. and Reynolds,E.C.
  TITLE     Protein substrates of a novel secretion system are numerous in the
            Bacteroidetes phylum and have in common a cleavable C-terminal
            secretion signal, extensive post-translational modification, and
            cell-surface attachment
  JOURNAL   J Proteome Res 12 (10), 4449-4461 (2013)
   PUBMED   24007199
REFERENCE   2  (residues 1 to 753)
  AUTHORS   Glew,M.D., Veith,P.D., Peng,B., Chen,Y.Y., Gorasia,D.G., Yang,Q.,
            Slakeski,N., Chen,D., Moore,C., Crawford,S. and Reynolds,E.C.
  TITLE     PG0026 is the C-terminal signal peptidase of a novel secretion
            system of Porphyromonas gingivalis
  JOURNAL   J Biol Chem 287 (29), 24605-24617 (2012)
   PUBMED   22593568
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039201.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18962.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..753
                     /product="T9SS type A sorting domain-containing protein"
                     /GO_component="GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /calculated_mol_wt=84844
     Region          431..>671
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          680..752
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mdrkknfikp lstsiffkky ylillffill gtdlfaqtel iinttgygfn kseanginte
       61 qwdyikkfvn ishngqdasv tavrlhiewh qyeptpgnyq rkqiveavka iialkpgmkf
      121 alhfpyqrpg ywndsyfstn diaqtrlgaf vrneiayacp smysdyattr fyafvddvlt
      181 qisayypqll yvqmgnspae efampfnngn pepglyeqaa vkawrekflp lrfpnkttak
      241 wgnqeyviqn apqpmdgnwt sdmgkdlhrf agwgllkkfe gfyrivknhs qsikvlyfis
      301 dfgsqqgnlr hlhnstipla lqladgiyss dgtnpwdlwr kisvpdiikg tdpnkiaave
      361 fdpedlgepr ggngiegnip mewfpraykh gtnyvhiamh ftdleiaqlk palakcraef
      421 vnnayiapir ttttpvniyp nvfteaylfe ewrnggldwg ttdvrpksik msddgywdnl
      481 wdsynllpct ftisativdn kpkpgakttl svscagrecd garftwngqg ivnaagssve
      541 itapsnpgty aytvkssrsg cmpktatatl lsenplpvtl vnfaatkenk vsqltwqtts
      601 etnsdrfeie rsmdgkvwnk igfvksngdt yqsvsnysfs dnnpvngenl yrlkmidrde
      661 tfafsairsv tfkneasiav ypnpvsnklm itsenwpdik kvqiiettgn llydsgnkpe
      721 peidvtsfnq giylirliss dgssetlkfv kkg
//
LOCUS       WP_235152324             195 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6702 family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235152324
VERSION     WP_235152324.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042765.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20420.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..195
                     /product="DUF6702 family protein"
                     /calculated_mol_wt=22447
     Region          49..187
                     /region_name="DUF6702"
                     /note="Domain of unknown function (DUF6702); pfam20420"
                     /db_xref="CDD:466569"
ORIGIN      
        1 mfgklfskni pnrslkqrpv vltnftssyt falkifflpf livifclssa fapkheyhvs
       61 vtqmqydkpg ksfqisirif tddlekgise dnnkkiftik nndlnnpfve ryirkhfilt
      121 naqkkaevqy lgkeeeadat wvyleipftd npvgwklqns ilmdvfddqv nmtnvkslag
      181 pktflfkkgq tvqsl
//
LOCUS       WP_235152364             390 aa            linear   BCT 02-MAR-2025
DEFINITION  AIR synthase related protein [Dyadobacter sp. CY345].
ACCESSION   WP_235152364
VERSION     WP_235152364.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 390)
  AUTHORS   Li,C., Kappock,T.J., Stubbe,J., Weaver,T.M. and Ealick,S.E.
  TITLE     X-ray crystal structure of aminoimidazole ribonucleotide synthetase
            (PurM), from the Escherichia coli purine biosynthetic pathway at
            2.5 A resolution
  JOURNAL   Structure 7 (9), 1155-1166 (1999)
   PUBMED   10508786
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00586.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..390
                     /product="AIR synthase related protein"
                     /calculated_mol_wt=42426
     Region          34..371
                     /region_name="PurM-like"
                     /note="AIR (aminoimidazole ribonucleotide) synthase
                     related protein. This family includes Hydrogen
                     expression/formation protein HypE, AIR synthases, FGAM
                     (formylglycinamidine ribonucleotide) synthase and
                     Selenophosphate synthetase (SelD). The N-terminal
                     domain...; cl10019"
                     /db_xref="CDD:471963"
     Site            order(50..53,55,92,103,106,109,147,158..159,163)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:100032"
     Site            order(88,92,145..147)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:100032"
ORIGIN      
        1 mettdrylqr gvsaskedvh kaiekidkgl ypkafckivp dtlagdpeyc timhadgagt
       61 ktslaylywk etgdisvwkg iaqdaivmnt ddllcvgatg pmlysstidr nknripgevi
      121 aevingaeei lemlrsygve iystggetad vgdlvrtvtv nstviarmkr sevvdnanik
      181 agdvivglas ygqstyetsy nggmgsnglt sarhdvlgky laekygesfd pevnsdliys
      241 gskkltdpve gtplnvgqli lsptrtyapv akalldelrp hihgmvhcsg gaqtkilhfi
      301 dnlhiikdnl lpvpplfkli qeesgtswqe mykvfnmghr leiylaeeha arvialsqsf
      361 gieaqivgrv easpvkklti sseagtflye
//
LOCUS       WP_235152399             463 aa            linear   BCT 02-MAR-2025
DEFINITION  S41 family peptidase [Dyadobacter sp. CY345].
ACCESSION   WP_235152399
VERSION     WP_235152399.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015531.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03572.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..463
                     /product="S41 family peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=51391
     Region          24..414
                     /region_name="Peptidase_S41_CPP_like"
                     /note="C-terminal processing peptidase-like; serine
                     protease family S41; cd07561"
                     /db_xref="CDD:143477"
     Region          121..169
                     /region_name="PDZ_6"
                     /note="PDZ domain; pfam17820"
                     /db_xref="CDD:436067"
     Site            order(331,356)
                     /site_type="active"
                     /note="Catalytic dyad [active]"
                     /db_xref="CDD:143477"
ORIGIN      
        1 mrkvlpivlv lvgflsacre knvdpatdve tskwiveqmk twyywndkmp anpdltlape
       61 alfnsllyky datarpdgdr fswiesdada lkaelsgstk ttglefrlfy yptggtnimg
      121 lvtyalpgsp aaiagfkrgd iitriddkql tasnyydlvy sdaakkytlg alneqdaiie
      181 tsetksvtpv sfqedpvffd ttfqygsntv gylvyhqfia sksgsekkey dqkvdnvfad
      241 fksknvnsli ldlrynpggy vssatnlasl igkgitnndi fyykeynttl tpafekrygk
      301 dyflekfssk sqnigsglkn liiltsnrta sasellingl kpfmtvtvig dqtvgknvgs
      361 itisddskkv kwglqpivtk sfnslkqsdy skgftpdvtv reglrlypyg nikdpllaea
      421 lskitgsqfv rkkaeqlrta efaedfssti enkaggsnmf fdk
//
LOCUS       WP_235152455             363 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Dyadobacter sp. CY345].
ACCESSION   WP_235152455
VERSION     WP_235152455.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..363
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=42264
     Region          12..298
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mthtyfrkil ilpdagtknp fqyllidflr knglnvfvaq klklfsiysa vnktnpdvvy
       61 fdwvhsfilg ksllttllks ivflleiiyl hyikaipiih tvhniqnhkg lslklekviy
      121 cfflsrctki rvyseavkre iiqifnispe rifviqdvpf hhyypntstk rdsrlnlgfk
      181 ekdflylffg riepykgied lirafleiik hndyliiage nldkeyllkl knlsaihpni
      241 iwhnefiekd svqyffnaad ivvlpftrid hsgsidlsls fakpvitlat eaissllahq
      301 hfllfedstq ladlmcrakq ldldsignqn fkiadsayyf dlltlfqkvk ipanedtfrh
      361 eyi
//
LOCUS       WP_235152492             276 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Dyadobacter sp. CY345].
ACCESSION   WP_235152492
VERSION     WP_235152492.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024870.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13479.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..276
                     /product="AAA family ATPase"
                     /calculated_mol_wt=31456
     Region          11..186
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 mqlhrakrqn tkvkigiqgp sgsgktkssl llafgltndw skiaiidten qsselyshig
       61 nfnvlplyyp ftperfneai htcisagmea iiidsisaew qnilsehtlm tgntytnwsk
      121 ltprhqkfve sliqtdvhii ctlrskqayi ltekngkqvp ekvgmkpiqr edldyelslv
      181 fqlsmkhkat vikdrteifa dkpeflinae tgriikewcn qdlpteqkli sqisacndip
      241 slktifeshp lyqdllrnqf nlrreqilst ngksty
//
LOCUS       WP_235152491             319 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3871 family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235152491
VERSION     WP_235152491.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 319)
  AUTHORS   Sonnenburg,E.D., Sonnenburg,J.L., Manchester,J.K., Hansen,E.E.,
            Chiang,H.C. and Gordon,J.I.
  TITLE     A hybrid two-component system protein of a prominent human gut
            symbiont couples glycan sensing in vivo to carbohydrate metabolism
  JOURNAL   Proc Natl Acad Sci U S A 103 (23), 8834-8839 (2006)
   PUBMED   16735464
REFERENCE   2  (residues 1 to 319)
  AUTHORS   Sonnenburg,J.L., Xu,J., Leip,D.D., Chen,C.H., Westover,B.P.,
            Weatherford,J., Buhler,J.D. and Gordon,J.I.
  TITLE     Glycan foraging in vivo by an intestine-adapted bacterial symbiont
  JOURNAL   Science 307 (5717), 1955-1959 (2005)
   PUBMED   15790854
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024389.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12987.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..319
                     /product="DUF3871 family protein"
                     /calculated_mol_wt=36105
     Region          2..318
                     /region_name="DUF3871"
                     /note="Domain of unknown function, B. Theta Gene
                     description (DUF3871); pfam12987"
                     /db_xref="CDD:432921"
ORIGIN      
        1 menllidnpv lqtkaseafi eanttsvslh dmmtshiipv ftkdneplis htdfisiaee
       61 vssivfrdev iipanirvsh pikgripdak dkpanqllek ektiyyermm flieipsire
      121 tidgntlnlt iggvksytqd nlynrkgsde hfkifigfkn qvctnlcvst dglqanvkvk
      181 namqlmqeiq klitdfrfek qlemlkqfps yslsehqfat lvgkcklyqy lpvsdkkdlp
      241 ilsfgdyqis aiakdyytdq sfcrkpdgsi nlwkvynlft gankssyidg flprsanass
      301 fvsdlvntmd sgntswfln
//
LOCUS       WP_235152510             196 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Dyadobacter sp. CY345].
ACCESSION   WP_235152510
VERSION     WP_235152510.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 196)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 196)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..196
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=22578
     Region          <107..178
                     /region_name="RimI"
                     /note="Ribosomal protein S18 acetylase RimI and related
                     acetyltransferases [Translation, ribosomal structure and
                     biogenesis]; COG0456"
                     /db_xref="CDD:440224"
ORIGIN      
        1 msltfitkqg naiasvfddl aklriavfrd fpylyegsld yekeylkiys kseraflfav
       61 yddekmvgat tciplsdetn dvqapfknag sdiekifyfg esilltqyrr lglghrffde
      121 reehaasfgt fkttcfcsve rinhpaqpad yrpndafwik rgyhkvpelt ttmewpdige
      181 pistpktmif wmkeiv
//
LOCUS       WP_235152539             564 aa            linear   BCT 02-MAR-2025
DEFINITION  GMC oxidoreductase [Dyadobacter sp. CY345].
ACCESSION   WP_235152539
VERSION     WP_235152539.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05199.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..564
                     /product="GMC oxidoreductase"
                     /GO_function="GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /calculated_mol_wt=63094
     Region          4..554
                     /region_name="BetA"
                     /note="Choline dehydrogenase or related flavoprotein
                     [Lipid transport and metabolism, General function
                     prediction only]; COG2303"
                     /db_xref="CDD:441878"
ORIGIN      
        1 msqnentfda ivigsgisgg waakelcekg mktlvlergr nvehnkdypt ahlnpwdfeh
       61 rgnltkkfln enpliskaag fgddtkhffv qdkdhpyvqe kpfdwirgyq vggksltwgr
      121 acqrwsefef taperfgygi gwpigyqdva pwyshveefi gvcgnkdgle smpdgeylpp
      181 felncvqqvv qqkikenykd rhlvharwah ltkpkeihlk qgrggcqarn lcmrgcpygg
      241 yfssvsstlp waektgnltv rphsvvhsit fdeksgkasg vkiidantke viefsariif
      301 lnasalnsnl illnsksnrf paglgndsgv lgkyvafhny rasvaadidg yedkyyfgrn
      361 ptepilanyr nlhkqdtdyv ggfttfmgay rtrgndsaqt eigsalkenm skpggwkvym
      421 ymqgetipkv tnqvslsldk kdqwgipllv tsvgyddnde kmirdflkes admleksgck
      481 nisqhdnkqa pgldihemgg crmgkdpkts mlnewnqlhh cknvfvtdga cmtstgnqsp
      541 sllymalaar avdfavqeik kgdl
//
LOCUS       WP_235152558             248 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA-formamidopyrimidine glycosylase family protein [Dyadobacter sp.
            CY345].
ACCESSION   WP_235152558
VERSION     WP_235152558.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 248)
  AUTHORS   Gilboa,R., Zharkov,D.O., Golan,G., Fernandes,A.S., Gerchman,S.E.,
            Matz,E., Kycia,J.H., Grollman,A.P. and Shoham,G.
  TITLE     Structure of formamidopyrimidine-DNA glycosylase covalently
            complexed to DNA
  JOURNAL   J Biol Chem 277 (22), 19811-19816 (2002)
   PUBMED   11912217
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013328.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01149.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..248
                     /product="DNA-formamidopyrimidine glycosylase family
                     protein"
                     /GO_function="GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /calculated_mol_wt=28827
     Region          1..100
                     /region_name="BaFpgNei_N_2"
                     /note="Uncharacterized bacterial subgroup of the
                     N-terminal domain of Fpg (formamidopyrimidine-DNA
                     glycosylase, MutM)_Nei (endonuclease VIII) base-excision
                     repair DNA glycosylases; cd08974"
                     /db_xref="CDD:176808"
     Region          2..241
                     /region_name="Nei"
                     /note="Formamidopyrimidine-DNA glycosylase [Replication,
                     recombination and repair]; COG0266"
                     /db_xref="CDD:440036"
     Site            order(2..3,51,65,67..69,78..79)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176808"
     Site            2
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:176808"
     Site            order(3..6,8..9,12,48..52)
                     /site_type="other"
                     /note="putative H2TH interface [polypeptide binding]"
                     /db_xref="CDD:176808"
     Site            order(3,51)
                     /site_type="active"
                     /note="putative catalytic residues [active]"
                     /db_xref="CDD:176808"
ORIGIN      
        1 mpegpsivil rqaieelnlk gekiefaegt aaidmerlig qevidfrswg khflvcletf
       61 tlrihfmlfg sylinerkkm nvrlslqfek aemnfyacsv kileeiaaei ydwegdimse
      121 ewnskkalqk lknaptmlac dalldqnifs gsgniiknev lfrirvhpls vlgeipaakl
      181 kelvkearay sfdflewkke nmlkkhwlah tkkicprcqi pfhkeylgka krrsyycinc
      241 qvlynrkt
//
LOCUS       WP_235152611             588 aa            linear   BCT 02-MAR-2025
DEFINITION  discoidin domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235152611
VERSION     WP_235152611.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 588)
  AUTHORS   Baumgartner,S., Hofmann,K., Chiquet-Ehrismann,R. and Bucher,P.
  TITLE     The discoidin domain family revisited: new members from prokaryotes
            and a homology-based fold prediction
  JOURNAL   Protein Sci 7 (7), 1626-1631 (1998)
   PUBMED   9684896
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012956.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00754.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..588
                     /product="discoidin domain-containing protein"
                     /calculated_mol_wt=67802
     Region          50..365
                     /region_name="GH43-like"
                     /note="Glycosyl hydrolase family 43 protein;
                     uncharacterized; cd08982"
                     /db_xref="CDD:350096"
     Region          360..472
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
     Region          500..588
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(500,562,577)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(578..579,581..582)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
ORIGIN      
        1 mltktrllll ltiffciqsi pnlaqqqtty cnpmdidyky nfeqlndkis yrsgadpvii
       61 nhkseyflfv tisggywhsk dmlnwkyita nrwpfedmca paaasvndtl flfqstfdsr
      121 pilysvapek giwefynrwt prlpkdigpw dpaffhdpdt nrwfmywgss nvypifgael
      181 dhskklafkd qykamfwlnq yehgwerfgp nhsdpfkpft egawmtkhkg kyylqygapg
      241 teynvyangt yvaddplgpf tyapynpvsy kpggfatgag hgntfqdnyg nywntgtswi
      301 glnwamerri vqhpagfdkd gqmfantrfg dfphkmttkk wdgkgdelft gwmllsykkp
      361 vtassmldtm saakitdenp rtfwaakqnk agetltidlq keqevkaiqi nytdyksnif
      421 dndsekvytq fkiftstdgk kwnlatdltt qpkrdrpcay ielskpvkar yilyehihva
      481 spilaisefr vfgngfgelp stpkkltair qkdqrnvdlt wekvagavgy nilwgitpdk
      541 lyqtyqfwnd epnnfelral nvgvpyyfai eafdengvsa pseivnik
//
LOCUS       WP_235152663             207 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6134 family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235152663
VERSION     WP_235152663.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040005.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19630.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..207
                     /product="DUF6134 family protein"
                     /calculated_mol_wt=23824
     Region          37..206
                     /region_name="DUF6134"
                     /note="Domain of unknown function (DUF6134); pfam19630"
                     /db_xref="CDD:466133"
ORIGIN      
        1 mkgrnkqtyi qnaikqvcvi llflaasnsy gqqhrnysvi wrgkevgslk atsqtqpqgq
       61 mystisemni qmllsfhiqs nitnlfsnsh lkeaqvqrfv nkkkkltstt hfnqnhyelk
      121 kdkddiiklk snipatvtwl yfnepiqkte ifsetfltfl kfkqiaasvy kttlpdgdvm
      181 tytyqsgilq rveiesgygd fvfklki
//
LOCUS       WP_235152667             152 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1572 family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235152667
VERSION     WP_235152667.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019241.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07609.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..152
                     /product="DUF1572 family protein"
                     /calculated_mol_wt=17893
     Region          26..151
                     /region_name="DinB_2"
                     /note="DinB superfamily; cl46334"
                     /db_xref="CDD:480674"
ORIGIN      
        1 melqeyiily krdlnrlkke isayateell wvklpgtins ggnicqhlig nlrtyiglqi
       61 ggfsyirdre aefdlrlftk eqllleidfl leiipesilk mnekmmsdey phdvveinsq
      121 qsyafilthl yqhlawhtgq inyhrrivnh ei
//
LOCUS       WP_235152677              95 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6364 family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235152677
VERSION     WP_235152677.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039417.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19891.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..95
                     /product="DUF6364 family protein"
                     /calculated_mol_wt=10649
     Region          8..>56
                     /region_name="DUF6364"
                     /note="Family of unknown function (DUF6364); pfam19891"
                     /db_xref="CDD:466224"
ORIGIN      
        1 maankepkvk ltltvkksvi eeakryasls eisisnlved ylatyskkns qptteiedfk
       61 eslpyklmgf akdgplskmt ddeirsmrvk ekfgl
//
LOCUS       WP_235152710             133 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3224 domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235152710
VERSION     WP_235152710.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022963.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11528.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..133
                     /product="DUF3224 domain-containing protein"
                     /calculated_mol_wt=14340
     Region          9..129
                     /region_name="DUF3224"
                     /note="Protein of unknown function (DUF3224); pfam11528"
                     /db_xref="CDD:431921"
ORIGIN      
        1 mtlsasavfh itdgyeesfs kiengqkltt gkffifyege lsgesvimel knylndkkat
       61 vyglerftgt lagkngsfvl ehsgvfengv itstrkvvag sgtnelaglr geaiftsges
      121 kefhltlnys fta
//
LOCUS       WP_235152761             444 aa            linear   BCT 02-MAR-2025
DEFINITION  M43 family zinc metalloprotease [Dyadobacter sp. CY345].
ACCESSION   WP_235152761
VERSION     WP_235152761.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 444)
  AUTHORS   Chen,B.K., Overgaard,M.T., Bale,L.K., Resch,Z.T., Christiansen,M.,
            Oxvig,C. and Conover,C.A.
  TITLE     Molecular regulation of the IGF-binding protein-4 protease system
            in human fibroblasts: identification of a novel inducible inhibitor
  JOURNAL   Endocrinology 143 (4), 1199-1205 (2002)
   PUBMED   11897673
REFERENCE   2  (residues 1 to 444)
  AUTHORS   Mazerbourg,S., Overgaard,M.T., Oxvig,C., Christiansen,M.,
            Conover,C.A., Laurendeau,I., Vidaud,M., Tosser-Klopp,G., Zapf,J.
            and Monget,P.
  TITLE     Pregnancy-associated plasma protein-A (PAPP-A) in ovine, bovine,
            porcine, and equine ovarian follicles: involvement in IGF binding
            protein-4 proteolytic degradation and mRNA expression during
            follicular development
  JOURNAL   Endocrinology 142 (12), 5243-5253 (2001)
   PUBMED   11713222
REFERENCE   3  (residues 1 to 444)
  AUTHORS   Chelius,D., Conover,C.A., Baldwin,M.A. and Spencer,E.M.
  TITLE     Characterization of the enzymatic specificity of the IGF-dependent
            insulin-like growth factor binding protein-4 (IGFBP-4) protease
  JOURNAL   Growth Horm IGF Res 10 (6), 360-366 (2000)
   PUBMED   11161967
REFERENCE   4  (residues 1 to 444)
  AUTHORS   Overgaard,M.T., Haaning,J., Boldt,H.B., Olsen,I.M., Laursen,L.S.,
            Christiansen,M., Gleich,G.J., Sottrup-Jensen,L., Conover,C.A. and
            Oxvig,C.
  TITLE     Expression of recombinant human pregnancy-associated plasma
            protein-A and identification of the proform of eosinophil major
            basic protein as its physiological inhibitor
  JOURNAL   J Biol Chem 275 (40), 31128-31133 (2000)
   PUBMED   10913121
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017393.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05572.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..444
                     /product="M43 family zinc metalloprotease"
                     /calculated_mol_wt=50829
     Region          84..341
                     /region_name="ZnMc_pappalysin_like"
                     /note="Zinc-dependent metalloprotease, pappalysin_like
                     subfamily. The pregnancy-associated plasma protein A
                     (PAPP-A or pappalysin-1) cleaves insulin-like growth
                     factor-binding proteins 4 and 5, thereby promoting cell
                     growth by releasing bound growth factor; cd04275"
                     /db_xref="CDD:239802"
     Site            order(260..261,264,270)
                     /site_type="active"
                     /db_xref="CDD:239802"
     Region          368..443
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     pfam18962"
                     /db_xref="CDD:436869"
ORIGIN      
        1 mknrkfnrht flfiallglf fpgsvfaqia dsllircvth ereiykekks pglyqdrint
       61 enaiqeylns nrvnlrvgat neviripvvv hilhnrrdgv vggpnnpnit neqirsqiev
      121 lnedyrrkan trgfnsdpvg vdtgiefyla eydengkstt gitrtqylar dlfnpitddq
      181 llsdiaywps dkylniwvcr lldsylgisq fpsvegidgl ntrnenyert dgviidfrff
      241 grdatvntsk iynlgrttth evghwlglih iwgdafcgdd fcddtppaes rnqtsvcvdk
      301 ysncsgfptr nmienymdys pdscmnifta dqlarmkavl elsprrkkmi esakegrlep
      361 senlalevfp npaseevnan vrfadfqnfs lsiydikgnr lenqtytdvw srrvtldink
      421 ldtglyffkv ttdketvtkr fvik
//
LOCUS       WP_235152771             130 aa            linear   BCT 02-MAR-2025
DEFINITION  START-like domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235152771
VERSION     WP_235152771.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039344.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19569.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..130
                     /product="START-like domain-containing protein"
                     /calculated_mol_wt=15044
     Region          2..130
                     /region_name="START_2"
                     /note="START-like superfamily domain; pfam19569"
                     /db_xref="CDD:437401"
ORIGIN      
        1 mekfkfttef elrsspkvlf pyistpsgle qwfaekvivm pnqrfdfqwd gdshiarqtg
       61 lrinkgvkfe fentsdddld nnhleiklev seltqttflr vtdysanrde aelislwngf
      121 mdnlkeivgs
//
LOCUS       WP_235152878             659 aa            linear   BCT 02-MAR-2025
DEFINITION  histidine kinase dimerization/phosphoacceptor domain -containing
            protein [Dyadobacter sp. CY345].
ACCESSION   WP_235152878
VERSION     WP_235152878.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 659)
  AUTHORS   Herrou,J., Crosson,S. and Fiebig,A.
  TITLE     Structure and function of HWE/HisKA2-family sensor histidine
            kinases
  JOURNAL   Curr Opin Microbiol 36, 47-54 (2017)
   PUBMED   28193573
REFERENCE   2  (residues 1 to 659)
  AUTHORS   Grebe,T.W. and Stock,J.B.
  TITLE     The histidine protein kinase superfamily
  JOURNAL   Adv Microb Physiol 41, 139-227 (1999)
   PUBMED   10500846
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019205.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07568.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..659
                     /product="histidine kinase dimerization/phosphoacceptor
                     domain -containing protein"
                     /calculated_mol_wt=75826
     Region          6..>197
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          88..116
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(89,92..93,96..97,99,128,131..132,135..136,138..139,
                     165,171..172,175..176,179)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          126..156
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          141..>347
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          164..195
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <445..654
                     /region_name="COG3920"
                     /note="Two-component sensor histidine kinase, HisKA and
                     HATPase domains [Signal transduction mechanisms]"
                     /db_xref="CDD:443125"
ORIGIN      
        1 myrsklllrl hdkavyyfen gnteegeklf kelidrtsrq gneatqaalw qelallippr
       61 dssgitrlyc fekmvflykk agieameies lksiadlnmv qgrldlaekq llnvlhryks
      121 igypklfyvy dllavtnryk gdfskgifys lkaiesmeaa kdfspavvfy srlanmyrel
      181 gqteksvewy rkvfekreyt etvnlymfrd agflarglik lkkekealaf ildisaknkp
      241 ngvhaqasll aslaycykvi nqeqrannyy aklvkltgrl gednevntdv hyelgqyfme
      301 khqfrnalff lqkalnapag tnsiadtkei ylmlfksdsa lgnyrsatqy llkhmalkds
      361 ifsetksrqi eelqvryeia erkkdielln nknqqahrik nialagaall liivllllns
      421 fhakqrsnrr yeahqkevdq knifleklta kqekllkeke wlidevhhrv knnlqlvtsl
      481 lntqtvylkd qsavsavkds lrrvqtmsii hqklyedhns stiamqdyik dlvnylqesl
      541 dtdmqisfkq niepiyldvs qavplgliin esvvnamkyg fpkrqeaiir isltrdgvdy
      601 mvlgiqdngi glpagfelkk hqsqglnlvq glskqlkgef siennngvri kvrfialnn
//
LOCUS       WP_235152939             161 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Dyadobacter sp. CY345].
ACCESSION   WP_235152939
VERSION     WP_235152939.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 161)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..161
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=18524
     Region          4..138
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(114..117,119)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 mqkeiflved sadfrqivrv ifdkflpeyk irsfqgahel ykymvlqsde nfrgrrpvli
       61 ildlkmltls glevvkmlrk tpsnavtqwq tipiimlsal anqedinncy lagatsffsk
      121 pvelddlkql lirichywvd hnklatvstq stsatvmkfh p
//
LOCUS       WP_235153024             553 aa            linear   BCT 02-MAR-2025
DEFINITION  sodium:solute symporter family transporter [Dyadobacter sp. CY345].
ACCESSION   WP_235153024
VERSION     WP_235153024.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012686.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00474.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..553
                     /product="sodium:solute symporter family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /note="Members of the Solute:Sodium Symporter (SSS), TC
                     2.A.21 as described in tcdb.org, catalyze solute:Na+
                     symport. Known solutes for members of the family include
                     sugars, amino acids, nucleosides, inositols, vitamins,
                     urea or anions, depending on the system.; Members of the
                     Solute:Sodium Symporter (SSS), TC 2.A.21 as described in
                     tcdb.org, catalyze solute:Na+ symport. Known solutes for
                     members of the family include sugars, amino acids,
                     nucleosides, inositols, vitamins, urea or anions,
                     depending on the system."
                     /calculated_mol_wt=60731
     Region          7..459
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     Site            order(54,57,321,324..325)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271356"
ORIGIN      
        1 mnklqtldya aiilymiims gigifmgrlv knindyfkgg sgvswiaggi snfmtkfstv
       61 ifvafggiay sdglvaitvl watifpslia ifffakrwkr agimspvefl etrynapirq
      121 ifswsgvvfk llddmiklys iglfvtaasg isfetavisc giivtlytvi ggfwavivtd
      181 vvqfvilffa tlilvplays aagglenmqa vipqnmtwfn gkkgmplwli ayyvlliiry
      241 lgnwtfiqrf ysaktetdgq klaglsafff fifpfiflfp pvaarvilpd lenpemayva
      301 lclkllpkgi mglmmaamfs atmsvlsaey nvtasvltrd iyqrvfrpna sskesllvgr
      361 lmtfavgsvv tigaffvgsf ggafeankll ggifavpmiv pvifgillrk prpwgalatl
      421 flgvmvgfil nankaiswev atlieivfci iifiasgffp skdkiynekv gaffhkltip
      481 fvplketnad dkfidtlklm ygiafgltga mfvimgfpsr glisgqlala agilcmsvtt
      541 ylyfsktksv qne
//
LOCUS       WP_235153027             684 aa            linear   BCT 02-MAR-2025
DEFINITION  heparinase II/III domain-containing protein [Dyadobacter sp.
            CY345].
ACCESSION   WP_235153027
VERSION     WP_235153027.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 684)
  AUTHORS   Meier,E.L., Razavi,S., Inoue,T. and Goley,E.D.
  TITLE     A novel membrane anchor for FtsZ is linked to cell wall hydrolysis
            in Caulobacter crescentus
  JOURNAL   Mol Microbiol 101 (2), 265-280 (2016)
   PUBMED   27028265
REFERENCE   2  (residues 1 to 684)
  AUTHORS   Dong,W., Lu,W., McKeehan,W.L., Luo,Y. and Ye,S.
  TITLE     Structural basis of heparan sulfate-specific degradation by
            heparinase III
  JOURNAL   Protein Cell 3 (12), 950-961 (2012)
   PUBMED   23011846
REFERENCE   3  (residues 1 to 684)
  AUTHORS   Shaya,D., Tocilj,A., Li,Y., Myette,J., Venkataraman,G.,
            Sasisekharan,R. and Cygler,M.
  TITLE     Crystal structure of heparinase II from Pedobacter heparinus and
            its complex with a disaccharide product
  JOURNAL   J Biol Chem 281 (22), 15525-15535 (2006)
   PUBMED   16565082
REFERENCE   4  (residues 1 to 684)
  AUTHORS   Pojasek,K., Shriver,Z., Hu,Y. and Sasisekharan,R.
  TITLE     Histidine 295 and histidine 510 are crucial for the enzymatic
            degradation of heparan sulfate by heparinase III
  JOURNAL   Biochemistry 39 (14), 4012-4019 (2000)
   PUBMED   10747789
REFERENCE   5  (residues 1 to 684)
  AUTHORS   Su,H., Blain,F., Musil,R.A., Zimmermann,J.J., Gu,K. and
            Bennett,D.C.
  TITLE     Isolation and expression in Escherichia coli of hepB and hepC,
            genes coding for the glycosaminoglycan-degrading enzymes heparinase
            II and heparinase III, respectively, from Flavobacterium heparinum
  JOURNAL   Appl Environ Microbiol 62 (8), 2723-2734 (1996)
   PUBMED   8702264
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019552.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07940.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..684
                     /product="heparinase II/III domain-containing protein"
                     /GO_function="GO:0016829 - lyase activity [Evidence IEA]"
                     /calculated_mol_wt=76457
     Region          373..>431
                     /region_name="Hepar_II_III"
                     /note="Heparinase II/III-like protein; pfam07940"
                     /db_xref="CDD:429747"
ORIGIN      
        1 maiflndtek dilgreigkq dslisifyaa lqkrvnrrva wgnllgpdat tiwwhsaaey
       61 lsdaamcyai nsspeladwl haitldivrk payewigppf rdhlepltgh letahicwgi
      121 savydlaknv fseieqteir dalrekgigl crqwietnnh lanwrsimvs galvsavvle
      181 dektvaallp elklchnamq ddgsygeslq ygnylllals fakeavfrky psiaqdvlps
      241 fdssaawfvt smfytkpltg wgdepraraa nfndsaatfr psgdlllhma vrghsesakg
      301 lskwlfekyy tivpeqgphd latlgmrndw gfltlpllty psktispeea dlplttnfsn
      361 gsafirdawh gktiiatngg seplnglghl hgdlnsfilv hnnerlladp ghscyrnlih
      421 glesssqthn tctfliekes lglqedlaka tlleqksvfp rriivngkgg ekiergdkrl
      481 icekndvisv igsevgkayg qpiqefsrfw ilagsnvlfv idsitagypv ntvwnwvvnn
      541 rdgkaiwhke nncltvqknn agiklfhggn gsfsfpvygf lhdayhpepn qlgegrsgdg
      601 yvfrftekek sasrtvvhai aldepdllin wnlevnrnny tlksdtkswt lkindddsfs
      661 lisghgrtwn lkrneekygl erid
//
LOCUS       WP_235153033             644 aa            linear   BCT 02-MAR-2025
DEFINITION  T9SS type A sorting domain-containing protein [Dyadobacter sp.
            CY345].
ACCESSION   WP_235153033
VERSION     WP_235153033.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 644)
  AUTHORS   Veith,P.D., Nor Muhammad,N.A., Dashper,S.G., Likic,V.A.,
            Gorasia,D.G., Chen,D., Byrne,S.J., Catmull,D.V. and Reynolds,E.C.
  TITLE     Protein substrates of a novel secretion system are numerous in the
            Bacteroidetes phylum and have in common a cleavable C-terminal
            secretion signal, extensive post-translational modification, and
            cell-surface attachment
  JOURNAL   J Proteome Res 12 (10), 4449-4461 (2013)
   PUBMED   24007199
REFERENCE   2  (residues 1 to 644)
  AUTHORS   Glew,M.D., Veith,P.D., Peng,B., Chen,Y.Y., Gorasia,D.G., Yang,Q.,
            Slakeski,N., Chen,D., Moore,C., Crawford,S. and Reynolds,E.C.
  TITLE     PG0026 is the C-terminal signal peptidase of a novel secretion
            system of Porphyromonas gingivalis
  JOURNAL   J Biol Chem 287 (29), 24605-24617 (2012)
   PUBMED   22593568
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039201.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18962.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..644
                     /product="T9SS type A sorting domain-containing protein"
                     /GO_component="GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /calculated_mol_wt=69013
     Region          45..363
                     /region_name="NosD"
                     /note="Nitrous oxide reductase accessory protein NosD,
                     contains tandem CASH domains [Inorganic ion transport and
                     metabolism]; COG3420"
                     /db_xref="CDD:442646"
     Region          408..458
                     /region_name="choice_anch_Q"
                     /note="choice-of-anchor Q domain; NF041518"
                     /db_xref="CDD:469403"
     Region          570..643
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     cl46851"
                     /db_xref="CDD:481191"
ORIGIN      
        1 mtgfkkcafl ialfitvnaf grdifvatdg ndnlndgsts qpyltinkaa svaiagdivt
       61 irsgtympat ritaansgts vapiiyraev qgsviidgsm sasptsgdrl glftilgada
      121 atpkswivvd glriinstwa gfyanrssni ifrncstfnt gssgiigaas snitvlnntv
      181 qlacqfpsaa qgtnecitma svngfevayn svsdrmtdin nggegidakn eckngsihhn
      241 ivfdlvrlgi yidayqrnls nvdvyankvy dcskgivaai eaggtstgvk ihdnivydnp
      301 nggiqaagyl vggvmrdlsi yqntvvrcgg magstrfenf gimidadnas nsnfvvrnni
      361 vancpmqikt rtqnyltvdn nllfgpnssp ssgnnvfgnp gtnailsdpl fedavnnnfr
      421 lmdgspaidk aegtplstvd fydfqrtglp dlgaieyvsg vlpvtlvsft grqeksmeke
      481 mitlhwstvs einvseyvie kgnnpmmfea igsvsannti qansykfidw nlvkglqyyr
      541 lkmidldntf eyskiiavnv naekldkvvv fpnpatnsii vrhessadan gliqiissgg
      601 nfiskcsvlq nttetkvdvs slakgsyviv fersgvktsr vfik
//
LOCUS       WP_235153104             975 aa            linear   BCT 02-MAR-2025
DEFINITION  PAS domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235153104
VERSION     WP_235153104.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 975)
  AUTHORS   Hefti,M.H., Francoijs,K.J., de Vries,S.C., Dixon,R. and Vervoort,J.
  TITLE     The PAS fold. A redefinition of the PAS domain based upon
            structural prediction
  JOURNAL   Eur J Biochem 271 (6), 1198-1208 (2004)
   PUBMED   15009198
REFERENCE   2  (residues 1 to 975)
  AUTHORS   Ponting,C.P. and Aravind,L.
  TITLE     PAS: a multifunctional domain family comes to light
  JOURNAL   Curr Biol 7 (11), R674-R677 (1997)
   PUBMED   9382818
REFERENCE   3  (residues 1 to 975)
  AUTHORS   Zhulin,I.B., Taylor,B.L. and Dixon,R.
  TITLE     PAS domain S-boxes in Archaea, Bacteria and sensors for oxygen and
            redox
  JOURNAL   Trends Biochem Sci 22 (9), 331-333 (1997)
   PUBMED   9301332
REFERENCE   4  (residues 1 to 975)
  AUTHORS   Borgstahl,G.E., Williams,D.R. and Getzoff,E.D.
  TITLE     1.4 A structure of photoactive yellow protein, a cytosolic
            photoreceptor: unusual fold, active site, and chromophore
  JOURNAL   Biochemistry 34 (19), 6278-6287 (1995)
   PUBMED   7756254
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020037.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08448.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..975
                     /product="PAS domain-containing protein"
                     /calculated_mol_wt=109774
     Region          18..307
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          57..131
                     /region_name="PAS_3"
                     /note="PAS fold; pfam08447"
                     /db_xref="CDD:430001"
     Region          303..567
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          487..973
                     /region_name="COG4251"
                     /note="Bacteriophytochrome (light-regulated signal
                     transduction histidine kinase) [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443393"
ORIGIN      
        1 mngnikpfst dnvketsrlq lalrsagigt wqfdfltdsf lwcdqsklly hfqgqtediv
       61 sfekviglvy fedqnrfrea fhapfkvddd naheiefrvt siiegqtrwl lskgqiyfdd
      121 ngnpekiigt vqnitreild rkipletdna eetaecgdqa lilatevekr vnatqvlras
      181 eekfrslvee apvatclfvg tdhkievans kmlgywgkdk silskpviea ipeikgqpfe
      241 dlldevyntg ityeaksapa dlvvngvldt yyfdytykpl rnsqgevyai mnmahdvtre
      301 vhakrsleas eeklrsvfan asaamglfvg rdlhiqlanq afieiigkgp diigkalndv
      361 ipelhdqasi rilgevfdtg kprqrfesqv nllrdgvmts nyynitytpl fdsegkvyai
      421 ldigidvtet vlarqklees elfarniiyn spvakmvfig ndmvirtvne nmlemlgktd
      481 siigkpfmea vpelletqlm drlrevlrtg isynqpeeki dllhngvpys gyynynykal
      541 qntagenygv lvtaievtaq vlvrqkieea eqvlrdavel aelatwsinp etgdigyger
      601 mkewvgvmed frnfddgidf ipdkdrerir lalqealkpe gggiyeeehm ieniesgkkr
      661 yihsraktff dkdnkpykli giaqditeqr eiqdtleqlv qqrteeletm neelaainee
      721 ymatnedlaq snhlliqsnq slqqfayvas hdlqeplrki qsfgnllinr yseplgdgan
      781 lilrmqtaav rmsgliedll afsrisnqpd vsksislssv lqnvlsdlei kiqeteavit
      841 veklpsimgd dsqlgqlfqn llsnalkfsq kdkapiitvn cktissselp lsvnpaqvsp
      901 tyyqidvadn gigfeqkyse rifqlfqrlh grsefegtgi glsicervas nhggaisavs
      961 epgkgstfsi ffpfs
//
LOCUS       WP_235153190             346 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase-fold protein [Dyadobacter sp. CY345].
ACCESSION   WP_235153190
VERSION     WP_235153190.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 346)
  AUTHORS   Goins,C.M., Dajnowicz,S., Smith,M.D., Parks,J.M. and Ronning,D.R.
  TITLE     Mycolyltransferase from Mycobacterium tuberculosis in covalent
            complex with tetrahydrolipstatin provides insights into antigen 85
            catalysis
  JOURNAL   J Biol Chem 293 (10), 3651-3662 (2018)
   PUBMED   29352107
REFERENCE   2  (residues 1 to 346)
  AUTHORS   van Straaten,K.E., Gonzalez,C.F., Valladares,R.B., Xu,X.,
            Savchenko,A.V. and Sanders,D.A.
  TITLE     The structure of a putative S-formylglutathione hydrolase from
            Agrobacterium tumefaciens
  JOURNAL   Protein Sci 18 (10), 2196-2202 (2009)
   PUBMED   19653299
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012958.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00756.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..346
                     /product="alpha/beta hydrolase-fold protein"
                     /calculated_mol_wt=38425
     Region          28..92
                     /region_name="E_set"
                     /note="Early set domain associated with the catalytic
                     domain of sugar utilizing enzymes at either the N or C
                     terminus; cl28984"
                     /db_xref="CDD:475140"
     Region          <113..346
                     /region_name="Fes"
                     /note="Enterochelin esterase or related enzyme [Inorganic
                     ion transport and metabolism]; COG2382"
                     /db_xref="CDD:441948"
ORIGIN      
        1 maasnaqppg tpaqtlkyip fevnadssat frfyapnakt vtlggdlkav ksergadsvw
       61 tittspglnp svyrynflvd gnkvndpknp mvadfrpmve vvpknktlfw qqkevphgll
      121 sivyypskat kttrrmfvwt pptyfadnkk lpvlylmhgg gdndtnwpgq gkagwildnl
      181 faegkivpmi vvmpdgsipt etfaedlgns iipfvehnfr altdvphrai aglsmgglet
      241 letilkfpdn fayvnvmssg wfanrhgtfe kydpivkaaa ptlkktvkyf ifttggasdi
      301 adknndltra lfekyglkse lskmegghsm yvwrhdlynf sqkifk
//
LOCUS       WP_235153276             487 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Dyadobacter sp. CY345].
ACCESSION   WP_235153276
VERSION     WP_235153276.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 487)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024091.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12679.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..487
                     /product="ABC transporter permease subunit"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=56414
     Region          <154..275
                     /region_name="NosY"
                     /note="ABC-type transport system involved in multi-copper
                     enzyme maturation, permease component [Posttranslational
                     modification, protein turnover, chaperones]; COG1277"
                     /db_xref="CDD:440888"
     Region          297..447
                     /region_name="DUF3526"
                     /note="Domain of unknown function (DUF3526); pfam12040"
                     /db_xref="CDD:432281"
ORIGIN      
        1 mklsvfnilf nheikilsrn kvlvslfsli ililisslwi gssmlqkqqe tigkitqtet
       61 amtdslktri krieanqmvy pgfiwddptf ayntarnegp kyavkkpfal qalnvgqsdv
      121 qpfyykvyin kkqyltyese iensflqfig nfdfafvviy lfplliivfs ynvlssekeq
      181 gtwvllktsn hsiarmilwr iviryilftv ffwlivtpfl isqiggsfli ttnwawlmaf
      241 vslyfafwfa isflvnsfsm ssnvnamvli fiwlftgiiv pnllqvglsk typipsridm
      301 lteernaink yfekdgqelt kdvfsspram irqasivtpe mvygygvivy ksqeikdaat
      361 avaegklytq iqkqqdaisr fqllspalmm qeelsaltgt hwhqfnqfsl dvdkfrketq
      421 qfyypkmahe ntcrtfsldd adaipqfksk dyrdfswtnl rqtfftylgi iaivvfagyr
      481 rmldstk
//
LOCUS       WP_235153277             465 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Dyadobacter sp. CY345].
ACCESSION   WP_235153277
VERSION     WP_235153277.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 465)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024091.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12679.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..465
                     /product="ABC transporter permease subunit"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=52750
     Region          115..259
                     /region_name="NosY"
                     /note="ABC-type transport system involved in multi-copper
                     enzyme maturation, permease component [Posttranslational
                     modification, protein turnover, chaperones]; COG1277"
                     /db_xref="CDD:440888"
     Region          294..426
                     /region_name="DUF3526"
                     /note="Domain of unknown function (DUF3526); pfam12040"
                     /db_xref="CDD:432281"
ORIGIN      
        1 mirlliekel kelfrtskvi wmlgailslm flalyngyay yvshssllre sqevtykqfi
       61 sqgdknphlg ahfgfyaykp tadmamvdng iedytgnsfy lephkrgvvk fkeisdatgl
      121 rsfgflnigy laqfilplfi flithnifsk ewengtikll lsskatthqi fagklfacll
      181 lvlsmivvia lafmvllwke ndqgsfarll pacgfyilgl tlfsimitai gtsvslltks
      241 stlslillsg fwlvgvfllp rlagevsknv ypsitslefe nktfdekqyg vgneghkdir
      301 rekllketma kynvkkiedl pvyfipitie ffeesdgvvm drayqavden eslqdhfvla
      361 sawlspflaf rdfsmritat dmsthndftr kaenhrrkig eivddfyqkn tvagndfwkt
      421 vpqfsyqapg igwrlgnath sililtgwml fsiglmvfss rkmtv
//
LOCUS       WP_235153325             130 aa            linear   BCT 02-MAR-2025
DEFINITION  VanZ family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235153325
VERSION     WP_235153325.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 130)
  AUTHORS   Arthur,M., Depardieu,F., Molinas,C., Reynolds,P. and Courvalin,P.
  TITLE     The vanZ gene of Tn1546 from Enterococcus faecium BM4147 confers
            resistance to teicoplanin
  JOURNAL   Gene 154 (1), 87-92 (1995)
   PUBMED   7867956
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016763.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04892.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..130
                     /product="VanZ family protein"
                     /calculated_mol_wt=14457
     Region          14..129
                     /region_name="VanZ"
                     /note="VanZ-like family protein (function unknown)
                     [Function unknown]; cl42358"
                     /db_xref="CDD:478153"
ORIGIN      
        1 mlryliyill ltgaglvfyf swlpdpdign epyfpgwlge wtnkygnlrt avpfvflgal
       61 sefglvrapd qwkkrfiila llfglvvvae igqlfltdrh fdyqdilwgi agsiagllag
      121 ytakkllavg
//
LOCUS       WP_235153366             258 aa            linear   BCT 02-MAR-2025
DEFINITION  NIPSNAP family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235153366
VERSION     WP_235153366.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 258)
  AUTHORS   Seroussi,E., Pan,H.Q., Kedra,D., Roe,B.A. and Dumanski,J.P.
  TITLE     Characterization of the human NIPSNAP1 gene from 22q12: a member of
            a novel gene family
  JOURNAL   Gene 212 (1), 13-20 (1998)
   PUBMED   9661659
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019590.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07978.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..258
                     /product="NIPSNAP family protein"
                     /calculated_mol_wt=29186
     Region          154..256
                     /region_name="NIPSNAP"
                     /note="cl46801"
                     /db_xref="CDD:481141"
ORIGIN      
        1 mktnlaryft vllfvmaafa qtsalaekre lyqlkvyhlk dekqrdclen ylkqayipal
       61 hragigkvgv fkpagnadsl iyvlipfksa kqffslsdni aadknyltag ddylntsfdn
      121 pvfksiesil mesisgmpvl svptlksdaa driyelrrye aateklhenk isqfnngeld
      181 ifkrlgfntv fcgkvkagsk lpslvymtsf enkaerdahw kafsadsewi klnsqpkyah
      241 nflradiyll npvsysei
//
LOCUS       WP_235153373             491 aa            linear   BCT 02-MAR-2025
DEFINITION  SusD/RagB family nutrient-binding outer membrane lipoprotein
            [Dyadobacter sp. CY345].
ACCESSION   WP_235153373
VERSION     WP_235153373.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 491)
  AUTHORS   Koropatkin,N., Martens,E.C., Gordon,J.I. and Smith,T.J.
  TITLE     Structure of a SusD homologue, BT1043, involved in mucin O-glycan
            utilization in a prominent human gut symbiont
  JOURNAL   Biochemistry 48 (7), 1532-1542 (2009)
   PUBMED   19191477
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024181.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12771.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..491
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /calculated_mol_wt=54122
     Region          32..460
                     /region_name="SusD-like_2"
                     /note="Starch-binding associating with outer membrane;
                     pfam12771"
                     /db_xref="CDD:463695"
ORIGIN      
        1 mkktkqyiii lvaalfllpa ctddfveknt dpnaitdvtp dlllpgiirt avnemvnqsw
       61 gigniviqht akiqfvsedr ytwgdrdglw nnmynnlrnv qllielsdkn nsknykgisl
      121 imrawmysll tdaygdvpyt eatkgisgtf tpkyetqevi yagilndlkt andllgpget
      181 vvgdliyngd vqqwkklans lrlryllris dvkdvkadmq ailanptatp ifseenknsd
      241 natlryltsa pnqfpmytar qgsfdefrls knlgdkltal sdpritvfaq ptdasvaaga
      301 pkytgvpngl nevaaldyag gpnnvsraga lfykgsiter gldvakgyim gypelqfvla
      361 eavkkglvts tktaqmyyee gvrsafdfvd vtmpanylts pgvaysdada ltvvgtqkwi
      421 alfftgleaw fdwrrtgipt itagpdnvng gkvpvrfayp rseqvlnats lneavarqga
      481 dtyntkvwwd k
//
LOCUS       WP_235153389             487 aa            linear   BCT 02-MAR-2025
DEFINITION  T9SS type A sorting domain-containing protein [Dyadobacter sp.
            CY345].
ACCESSION   WP_235153389
VERSION     WP_235153389.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 487)
  AUTHORS   Veith,P.D., Nor Muhammad,N.A., Dashper,S.G., Likic,V.A.,
            Gorasia,D.G., Chen,D., Byrne,S.J., Catmull,D.V. and Reynolds,E.C.
  TITLE     Protein substrates of a novel secretion system are numerous in the
            Bacteroidetes phylum and have in common a cleavable C-terminal
            secretion signal, extensive post-translational modification, and
            cell-surface attachment
  JOURNAL   J Proteome Res 12 (10), 4449-4461 (2013)
   PUBMED   24007199
REFERENCE   2  (residues 1 to 487)
  AUTHORS   Glew,M.D., Veith,P.D., Peng,B., Chen,Y.Y., Gorasia,D.G., Yang,Q.,
            Slakeski,N., Chen,D., Moore,C., Crawford,S. and Reynolds,E.C.
  TITLE     PG0026 is the C-terminal signal peptidase of a novel secretion
            system of Porphyromonas gingivalis
  JOURNAL   J Biol Chem 287 (29), 24605-24617 (2012)
   PUBMED   22593568
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039201.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18962.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..487
                     /product="T9SS type A sorting domain-containing protein"
                     /GO_component="GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /calculated_mol_wt=51798
     Region          141..309
                     /region_name="choice_anch_E"
                     /note="choice-of-anchor E domain-containing protein;
                     NF033208"
                     /db_xref="CDD:467998"
     Region          418..485
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     cl46851"
                     /db_xref="CDD:481191"
ORIGIN      
        1 mmrtttltlk lilfvflslq lkaqtypvlp apdhnsdhna fitgsvtvtg sdqklagvvv
       61 klsrvvqgsa nvavaytltd adgnfsiagq sgvnyvlqye fptsgftspt gnpsstftav
      121 agsslapngg lelqrttnti tncnvlaptm tnwtqtiavd kavpltgaal qnisvftstl
      181 athpvisvtn dsdsesrirt liigasisil gpgdvetymd avktfattps ppardivlta
      241 rqtltyydis sgqaansivt gdktaylgtg nvvfdteakg sktisttsgn ttsteqtiag
      301 agvcltytyd edplpvtlis fevtaeskta nlnwattset nsesfeiqrs adakiwnkls
      361 svnaqgesnt ranyhftdtn plsgqnfyrl kmidrdgtfa ysrinsikfk gelslvkmyp
      421 npaanvlnvd aegnqiqrve iynqagklik gsknsavdvs dfangiysvr avyangqadq
      481 rkvviah
//
LOCUS       WP_235153462            2148 aa            linear   BCT 02-MAR-2025
DEFINITION  N,N-dimethylformamidase beta subunit family domain-containing
            protein [Dyadobacter sp. CY345].
ACCESSION   WP_235153462
VERSION     WP_235153462.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 2148)
  AUTHORS   Arya,C.K., Yadav,S., Fine,J., Casanal,A., Chopra,G., Ramanathan,G.,
            Vinothkumar,K.R. and Subramanian,R.
  TITLE     A 2-Tyr-1-carboxylate Mononuclear Iron Center Forms the Active Site
            of a Paracoccus Dimethylformamidase
  JOURNAL   Angew Chem Int Ed Engl 59 (39), 16961-16966 (2020)
   PUBMED   32452120
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042648.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20254.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..2148
                     /product="N,N-dimethylformamidase beta subunit family
                     domain-containing protein"
                     /calculated_mol_wt=229893
     Region          61..466
                     /region_name="DUF6605"
                     /note="Domain of unknown function (DUF6605); pfam20254"
                     /db_xref="CDD:466405"
     Region          <486..591
                     /region_name="SO_family_Moco"
                     /note="Sulfite oxidase (SO) family, molybdopterin binding
                     domain. This molybdopterin cofactor (Moco) binding domain
                     is found in a variety of oxidoreductases, main members of
                     this family are nitrate reductase (NR) and sulfite oxidase
                     (SO). SO catalyzes the...; cl00199"
                     /db_xref="CDD:469652"
     Region          615..761
                     /region_name="DUF4082"
                     /note="Domain of unknown function (DUF4082); pfam13313"
                     /db_xref="CDD:433109"
     Region          772..881
                     /region_name="Big_5"
                     /note="Bacterial Ig-like domain; pfam13205"
                     /db_xref="CDD:463809"
     Region          <1467..1699
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          1478..1570
                     /region_name="Pur_ac_phosph_N"
                     /note="Purple acid Phosphatase, N-terminal domain;
                     pfam16656"
                     /db_xref="CDD:465220"
     Region          <1724..1775
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cl22861"
                     /db_xref="CDD:473984"
     Region          1882..1966
                     /region_name="He_PIG"
                     /note="Putative Ig domain; pfam05345"
                     /db_xref="CDD:398814"
     Region          2074..2146
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mqihaqsnai vaenalpgsp asvwdisgsg slsiqgfatd isynkgeiar fkikttasgy
       61 tvkvyrlgyy gglgarfqgd givtatlpqs qspctsdfvd aanpgtglld cgnwaesanw
      121 pipadavsgi yiakltrndd ltasshiafi vrddasnsdl lfqtsdatwq ayniygdtet
      181 ngkslyrgvs ggkaskvsyn rpfytragng gggamedwlf nseypmlrfl ekngydvtyt
      241 tdidsdrrgn lianhkvfms vghdeywskg mrnnvtvard agthlaffsg nevywktrye
      301 nsistgnapf rtlvcykegs qgenqcngkc detttewtgl wrsgcefpgs dgcnpenkls
      361 gqlswdgftg tmevpsdykn lrfwrntsva alnngqtatl tantlgyewn peqesyrsty
      421 pagrvilskt ivngkthhls lyksasgalv fgagtvqwsw glddvhdrgs epvspamqqa
      481 tvnlfadmnv qpkslqsnll aaikstdiev pallitspts gasfpanavy tisgtasdna
      541 tvsgieistd ggttwrlaag tlnwtyawtp tspgaatima rvvddsgnls pvtslnvtvg
      601 aavaqvcpct vflptdvpgs qvfndgqsiq lgmkfssdvs glvtgvrfyk nvqnigthtg
      661 qlysaggall aqivfsnets egwqqanfss pipisantty iisyhsssgy yssvnpyftt
      721 ektnghlkgl adtdavpngv ykysaiptfp nenfqssnyy vdvvfelgtq sdvtppaivs
      781 tlpasgttnv nispeikitf nealdagtvs antvrllngt tvvpasiayd vstlsatiip
      841 tvalsyatty tieiiggnad prikditgna laanysatft traapvmlps pndgpggpil
      901 vissttnpfs rytveilrae glnefaakdi seiganpall nnydvillge filtpeivta
      961 ltnwvnaggt liafkpdaql nsllglttvs gllsdkylkv ntatapgtgi vsetiqfhgq
     1021 anlytlsgat siatlysnag latenpavts revgsnggka vaftydlaks ivytrqgnpa
     1081 wagqkrdgqs gpirsddlff pdwidfekvs ipqadeqqrl laniilqgnl hkkplprfwy
     1141 lprklkaavi mtgddhasgg tigrfddyla ksssndqaav dnwtavrgts yiypntpitn
     1201 eqaanfqakg feialhlntn cdnyteagis sllatqlnnf atqfpsllep ttnrthciaw
     1261 sdwatqpkve lqngirldan yyywpqawil drpgmftgsg mpmrfadldg smidvyqaat
     1321 qltdesginy athinslldn aigikgyygv ftanmhtdln ggnstdgsna iitsaqsrnv
     1381 pvisakqmlt wldgrnnsaf gnmswagnvl nfsittasgs nnmfamlpvr aidgelssit
     1441 vngspvtfvn etikgilyaf fpaasgnyva tytsdnippq ilnivatqsd pgsvviswtt
     1501 nepadskvvy gtspddlsqn iatatlvtnh sltitgllpg tiyyykvtsa dakansttep
     1561 gisgplsftt pvaacfddqt asdfnagnvg antvvttagv slkpkteeft tlppvsewqs
     1621 fpwnnggtst ivdgqiavdg aryntepeta tfgpgtsief ratfgatpfq higfgagnnv
     1681 dmynntaiwa mfstnntste lqarvanssf dnftipnivl gvphtyridw nvnsieffid
     1741 gvsvrtvnin lstpmrigms dynvggpals mdwirvtpst ypasgsfmsr vydagtqkew
     1801 qqaswtadip agtsvqlfqr qgnsadpadn swttftpias sgatvggvsr yiqyradlts
     1861 snsnvtpvlt svsidcakpa cpdiiftpat gatlaagtvs inysqtisls stgftfsasg
     1921 lpaglsinqs sgeitgkpte lgpfnvtvta tqgtcvksaa ytltispnpl pvtlvsftvv
     1981 kdeksallkw stsqetnses fsiehslnak nwnrigtvls kgessvlrky sftdknaang
     2041 enfyrlkmfd kdgtftfski qsvtfdnlpd kllvfpnpat dvltinvgdl akvksvrmhn
     2101 qkgntvysay gnnvnktidi kslvsgnyil vvvrkdgevm tskvviik
//
LOCUS       WP_235153468             113 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6249 domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235153468
VERSION     WP_235153468.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039701.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19762.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..113
                     /product="DUF6249 domain-containing protein"
                     /calculated_mol_wt=12263
     Region          7..108
                     /region_name="DUF6249"
                     /note="Domain of unknown function (DUF6249); pfam19762"
                     /db_xref="CDD:466175"
ORIGIN      
        1 msatsmsvmi algafsgifg ivyvflmtry keriamierg vdasifvsnn ksisptlkfg
       61 mlfvgialgi iigdvmhqfy glskgtsfls mvflfgglsl vinffierkl adq
//
LOCUS       WP_235153591             242 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF481 domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235153591
VERSION     WP_235153591.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016241.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04338.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..242
                     /product="DUF481 domain-containing protein"
                     /calculated_mol_wt=27110
     Region          35..239
                     /region_name="DUF481"
                     /note="Protein of unknown function, DUF481; pfam04338"
                     /db_xref="CDD:427876"
ORIGIN      
        1 madsatlapi qkdsivappi lfkldtityr figdgnftsg nvnrslmvlr aeiitsgpvl
       61 siatnprfty gkqngilaer dsyvdlfvdv fkkrktyvfg lgtletsnlr gitmrimgga
      121 gigyrllntd knkilltnal vhestnfrel ptksiqrnsf rvkgkhsfak drfrinhitf
      181 vqpavtdisn lrwntvisve fpvnkwvalr tsyensyenl veagrkrnds ritfgvsvgn
      241 rq
//
LOCUS       WP_235153569             118 aa            linear   BCT 02-MAR-2025
DEFINITION  efflux RND transporter permease subunit [Dyadobacter sp. CY345].
ACCESSION   WP_235153569
VERSION     WP_235153569.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 118)
  AUTHORS   Murakami,S., Nakashima,R., Yamashita,E. and Yamaguchi,A.
  TITLE     Crystal structure of bacterial multidrug efflux transporter AcrB
  JOURNAL   Nature 419 (6907), 587-593 (2002)
   PUBMED   12374972
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00873.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..118
                     /product="efflux RND transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=12112
     Region          <12..83
                     /region_name="AcrB"
                     /note="Multidrug efflux pump subunit AcrB [Defense
                     mechanisms]; COG0841"
                     /db_xref="CDD:440603"
ORIGIN      
        1 msylnikccf aaltasldsa glslrpvlmt sfamvagmip malgtgeage qvaplghavi
       61 ggliastlaa lyivpqvyvw lqgsvnfqdp sllpdnqdss qsivhsngst qsrsitsi
//
LOCUS       WP_235153632             332 aa            linear   BCT 02-MAR-2025
DEFINITION  T9SS type A sorting domain-containing protein [Dyadobacter sp.
            CY345].
ACCESSION   WP_235153632
VERSION     WP_235153632.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 332)
  AUTHORS   Veith,P.D., Nor Muhammad,N.A., Dashper,S.G., Likic,V.A.,
            Gorasia,D.G., Chen,D., Byrne,S.J., Catmull,D.V. and Reynolds,E.C.
  TITLE     Protein substrates of a novel secretion system are numerous in the
            Bacteroidetes phylum and have in common a cleavable C-terminal
            secretion signal, extensive post-translational modification, and
            cell-surface attachment
  JOURNAL   J Proteome Res 12 (10), 4449-4461 (2013)
   PUBMED   24007199
REFERENCE   2  (residues 1 to 332)
  AUTHORS   Glew,M.D., Veith,P.D., Peng,B., Chen,Y.Y., Gorasia,D.G., Yang,Q.,
            Slakeski,N., Chen,D., Moore,C., Crawford,S. and Reynolds,E.C.
  TITLE     PG0026 is the C-terminal signal peptidase of a novel secretion
            system of Porphyromonas gingivalis
  JOURNAL   J Biol Chem 287 (29), 24605-24617 (2012)
   PUBMED   22593568
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039201.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18962.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..332
                     /product="T9SS type A sorting domain-containing protein"
                     /GO_component="GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /calculated_mol_wt=35088
     Region          <84..153
                     /region_name="CshA_repeat"
                     /note="Surface adhesin CshA repetitive domain; pfam19076"
                     /db_xref="CDD:436944"
     Region          262..330
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mvptdgtgsp tvpilvdpti dgtpvgitfv sidnagkesa ntgtaaittt tpptasndng
       61 tttpgvevli ptldndtqgs askdptsvll idpadglkkt svtipgegty tvnsttgvvt
      121 ftpeatfnna kstitytykd ingnesnvat itvnmgplpv tlvsftaake gvtallswst
      181 tmetnserfd iehslsgknw eiigsvashg esaqqvnytf thatlsigen lyrlkmvdrd
      241 gtfaysriqg vksdsnveli sypnpvserl minnfglvkd itlysntgqm vihsnaltaq
      301 gidltkleag lymvklnltd grlitqkivv ik
//
LOCUS       WP_235153647             244 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6962 family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235153647
VERSION     WP_235153647.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046230.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22285.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..244
                     /product="DUF6962 family protein"
                     /calculated_mol_wt=27882
ORIGIN      
        1 mneiaidfdk vhqiklfgit ilepstviss llmaivcfya fvhlgklsrk hvmyrqiqyf
       61 flfmgiatvi ggvlghgfly vtgqrgkipg wfasmiaval feraaiwhik pllrpkfgsw
      121 lgylnyfelt tffvltfitl nfviveihav yglflmlcsi eiyvykkkkd pgskyifias
      181 flgavaagfh alkfsfgpwf nyndishipm glsiwyyyqa arnmiyygdp viepekviks
      241 even
//
LOCUS       WP_235153668             495 aa            linear   BCT 02-MAR-2025
DEFINITION  OstA-like protein [Dyadobacter sp. CY345].
ACCESSION   WP_235153668
VERSION     WP_235153668.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 495)
  AUTHORS   Aono,R., Negishi,T. and Nakajima,H.
  TITLE     Cloning of organic solvent tolerance gene ostA that determines
            n-hexane tolerance level in Escherichia coli
  JOURNAL   Appl Environ Microbiol 60 (12), 4624-4626 (1994)
   PUBMED   7811102
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024500.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13100.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..495
                     /product="OstA-like protein"
                     /calculated_mol_wt=55693
     Region          16..172
                     /region_name="LptD_N"
                     /note="LptA/(LptD N-terminal domain) LPS transport
                     protein; cl21541"
                     /db_xref="CDD:451300"
     Region          226..366
                     /region_name="LptA"
                     /note="Lipopolysaccharide export system protein LptA [Cell
                     wall/membrane/envelope biogenesis]; COG1934"
                     /db_xref="CDD:441537"
ORIGIN      
        1 maqqvtpssq qgptsdivel lksdelelis engvdsrrvv ngifkhkgal lysnlaiqnv
       61 stniieaygn vrivqgdtit vtgdtlhyfg nsrlaivsgk ktvlkdkvkt lttrkmeynm
      121 asgvayyrvp grtvdvenvl tsnegfyntn tkeftyykkv klvnkkytlt tdtllynsvt
      181 kwsyfngpsk ivnkdgtlls nkgaynsqtg esvfatrttv dnetytltad slsvdgqknn
      241 gqgkgnvviv akkdntilng dhgfyrkaeg fskiyghayv rnviskdtlf iradtlysfe
      301 nardstrrlv gdrnvfiyks dfqgkcdsis ydtadstilf fkkpilwsnq hyqmegdtis
      361 aflvnnainr mllkskafvi tedtlvqqfn qvkgrtinay faaesklrqv lvdgngesvy
      421 yaiddkekmi glnrvecgrm nllfvdnrvn riafigkpdg rlipprqikp ierqldgfnw
      481 rvsdkptrlk tlwle
//
LOCUS       WP_235153699            1376 aa            linear   BCT 02-MAR-2025
DEFINITION  PAS domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235153699
VERSION     WP_235153699.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 1376)
  AUTHORS   Hefti,M.H., Francoijs,K.J., de Vries,S.C., Dixon,R. and Vervoort,J.
  TITLE     The PAS fold. A redefinition of the PAS domain based upon
            structural prediction
  JOURNAL   Eur J Biochem 271 (6), 1198-1208 (2004)
   PUBMED   15009198
REFERENCE   2  (residues 1 to 1376)
  AUTHORS   Ponting,C.P. and Aravind,L.
  TITLE     PAS: a multifunctional domain family comes to light
  JOURNAL   Curr Biol 7 (11), R674-R677 (1997)
   PUBMED   9382818
REFERENCE   3  (residues 1 to 1376)
  AUTHORS   Zhulin,I.B., Taylor,B.L. and Dixon,R.
  TITLE     PAS domain S-boxes in Archaea, Bacteria and sensors for oxygen and
            redox
  JOURNAL   Trends Biochem Sci 22 (9), 331-333 (1997)
   PUBMED   9301332
REFERENCE   4  (residues 1 to 1376)
  AUTHORS   Borgstahl,G.E., Williams,D.R. and Getzoff,E.D.
  TITLE     1.4 A structure of photoactive yellow protein, a cytosolic
            photoreceptor: unusual fold, active site, and chromophore
  JOURNAL   Biochemistry 34 (19), 6278-6287 (1995)
   PUBMED   7756254
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020036.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08447.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1376
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..1376
                     /product="PAS domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=158724
     Region          11..132
                     /region_name="PAS_4"
                     /note="PAS fold; pfam08448"
                     /db_xref="CDD:312075"
     Region          140..395
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          260..>580
                     /region_name="GAF"
                     /note="GAF domain [Signal transduction mechanisms];
                     COG2203"
                     /db_xref="CDD:441805"
     Region          <615..837
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          <904..1007
                     /region_name="GAF_2"
                     /note="GAF domain; pfam13185"
                     /db_xref="CDD:433019"
     Region          <982..1372
                     /region_name="COG4251"
                     /note="Bacteriophytochrome (light-regulated signal
                     transduction histidine kinase) [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443393"
ORIGIN      
        1 mvdqnfsnsv fkalptptiv llpdaptftv vcandaylem vqlgesdleg kgffdafpnh
       61 pyvkppewks lfekllqdkl pnktpvfefp vpdkathllq irnlissntp ifddnnevky
      121 iirsvsdite lvkteinekt saasldknek flietqriak vgswevdmes rllkwtdvar
      181 eihevesgne idfdtvssfy sqgkdweals fviqraaqqg effdlevsmi sakgnlrwvr
      241 ttglgelkdg rfarlygtmq ditdrkviee elleaknkfe sliqtvdgiv wetdvvthef
      301 tfvsnqvkti lgyspqewmd tphfwenhih vddreeairf ciekskisrn ydfdyrmiha
      361 ngslvwikdm vsviqeggkn tklrgvmidi teakrftele rlektvleln sqknstitev
      421 lttyilgieq ifpkmlcsil qvknrqlynw aspslpavyi esiegipale nvgscgtaaf
      481 lkeiviasdi endsrwagfk qlalpfqlra cwshpvinse gevmatfgiy yneirspqse
      541 evetidrfta ilriilenrh nsdlleentq lmkqgqelah fgnwqwdfyn dkatwsdslf
      601 aiygldkvnf kasfqsyqei lhpddrqnvv dkikgvlntr kdivfeervi rptgeirhlk
      661 swgrlktdln gmpvkmigac lditegkkvq rdlkasesrl ltlveelkss naryeyvnka
      721 trdaiydwnm atdhiawgdg fnrlfgyevn rerypvnkwa slihesdvdf vgkslsaalq
      781 nrtqhnwrae yqfrkadgty afvqengyii rnpegdvirm igvlrdvsqr kktqlklvrk
      841 sallaaiaev nssllqydnw lnaidhsfai vgaainvdrv yyfenftdpv sgkiycnqrl
      901 ewnsgrfesq annpelqnvp hetladlvsp leknkpyigi vsnlpdsefk ssliaqeiks
      961 llifpvfakn kfygyigfdd cqnerkwded ersflktiav nlakaietde adkalvsafe
     1021 eknrilesiq dgffavskdw ivtywnkeae sltgikreei vgksiwktyy rniplrfynl
     1081 ylkatqenip vrfeeqllrl dkwfevnayp ttdgltvyfk diterkitea qlkemhqele
     1141 khikvlavsn aeleqfayva shdlqeplrm vtsfltllek kygesldeka rvyiyyavdg
     1201 akrmrqiild lldfsrvgkn kenpekvnvd eviceiltly qkkikdkkak ieysempqim
     1261 afkaplrqvf qnlisnalky qrkdqsphvk ivsidtpthw kfsvtdnglg inneyfekif
     1321 vifqrlhnre dysgtgmgla itkkivesld geiwveseeg kgstfyftia khfttl
//
LOCUS       WP_235153718             211 aa            linear   BCT 02-MAR-2025
DEFINITION  sterol desaturase family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235153718
VERSION     WP_235153718.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 211)
  AUTHORS   Zhu,G., Koszelak-Rosenblum,M., Connelly,S.M., Dumont,M.E. and
            Malkowski,M.G.
  TITLE     The Crystal Structure of an Integral Membrane Fatty Acid
            alpha-Hydroxylase
  JOURNAL   J Biol Chem 290 (50), 29820-29833 (2015)
   PUBMED   26515067
REFERENCE   2  (residues 1 to 211)
  AUTHORS   Lagarde,D. and Vermaas,W.
  TITLE     The zeaxanthin biosynthesis enzyme beta-carotene hydroxylase is
            involved in myxoxanthophyll synthesis in Synechocystis sp. PCC 6803
  JOURNAL   FEBS Lett 454 (3), 247-251 (1999)
   PUBMED   10431816
REFERENCE   3  (residues 1 to 211)
  AUTHORS   Husselstein,T., Schaller,H., Gachotte,D. and Benveniste,P.
  TITLE     Delta7-sterol-C5-desaturase: molecular characterization and
            functional expression of wild-type and mutant alleles
  JOURNAL   Plant Mol Biol 39 (5), 891-906 (1999)
   PUBMED   10344195
REFERENCE   4  (residues 1 to 211)
  AUTHORS   Mitchell,A.G. and Martin,C.E.
  TITLE     Fah1p, a Saccharomyces cerevisiae cytochrome b5 fusion protein, and
            its Arabidopsis thaliana homolog that lacks the cytochrome b5
            domain both function in the alpha-hydroxylation of
            sphingolipid-associated very long chain fatty acids
  JOURNAL   J Biol Chem 272 (45), 28281-28288 (1997)
   PUBMED   9353282
REFERENCE   5  (residues 1 to 211)
  AUTHORS   Bard,M., Bruner,D.A., Pierson,C.A., Lees,N.D., Biermann,B.,
            Frye,L., Koegel,C. and Barbuch,R.
  TITLE     Cloning and characterization of ERG25, the Saccharomyces cerevisiae
            gene encoding C-4 sterol methyl oxidase
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 186-190 (1996)
   PUBMED   8552601
REFERENCE   6  (residues 1 to 211)
  AUTHORS   Aarts,M.G., Keijzer,C.J., Stiekema,W.J. and Pereira,A.
  TITLE     Molecular characterization of the CER1 gene of arabidopsis involved
            in epicuticular wax biosynthesis and pollen fertility
  JOURNAL   Plant Cell 7 (12), 2115-2127 (1995)
   PUBMED   8718622
REFERENCE   7  (residues 1 to 211)
  AUTHORS   Arthington,B.A., Bennett,L.G., Skatrud,P.L., Guynn,C.J.,
            Barbuch,R.J., Ulbright,C.E. and Bard,M.
  TITLE     Cloning, disruption and sequence of the gene encoding yeast C-5
            sterol desaturase
  JOURNAL   Gene 102 (1), 39-44 (1991)
   PUBMED   1864507
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016041.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04116.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..211
                     /product="sterol desaturase family protein"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_process="GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=24857
     Region          9..201
                     /region_name="FA_hydroxylase"
                     /note="Fatty acid hydroxylase; cl01132"
                     /db_xref="CDD:412761"
ORIGIN      
        1 mpknyvsnsk esarmfksdl lesvskvhys vplfifvpvi iyfawkaise qqlstlqfsg
       61 fyllglfvwt lteyvmhrfi fhwepkkgnk iferihfifh gvhhdypsda hrlvmppsvs
      121 iplsaafyfl fslfletgql aaffsafmtg ylfydmthym lhhanfknkf wkklkkhhml
      181 hhyddatkgy gvssplwdki fssdflnkkn d
//
LOCUS       WP_235153721             297 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Dyadobacter sp. CY345].
ACCESSION   WP_235153721
VERSION     WP_235153721.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025089.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13712.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..297
                     /product="glycosyltransferase"
                     /calculated_mol_wt=33993
     Region          3..195
                     /region_name="Glyco_tranf_2_5"
                     /note="Glycosyltransferase like family; pfam13712"
                     /db_xref="CDD:463964"
ORIGIN      
        1 misivicsan andlrlvsrn ieqtigvpfe iisfdnsdgk kgicelynig akkakfdiic
       61 fmhediridt pdwgknvldk fagradigvv gvagggyksl tpsgwycley ksvdryfqnl
      121 lqgfkldekd eihayhnpye qkvsevicvd glwfcvrkei leekpfdeel lkgfhgydvd
      181 fclniygkhk ivvvydvlmk hasegnfnkn wldeilkvhk kwtkslplti sdvadielyd
      241 teeaalknlv eqmiewkysf yqihrmlltv gksgkmplrl ffkgyahlve qklgigk
//
LOCUS       WP_235153783             524 aa            linear   BCT 02-MAR-2025
DEFINITION  NFACT RNA binding domain-containing protein [Dyadobacter sp.
            CY345].
ACCESSION   WP_235153783
VERSION     WP_235153783.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 524)
  AUTHORS   Burroughs,A.M. and Aravind,L.
  TITLE     A highly conserved family of domains related to the DNA-glycosylase
            fold helps predict multiple novel pathways for RNA modifications
  JOURNAL   RNA Biol 11 (4), 360-372 (2014)
   PUBMED   24646681
REFERENCE   2  (residues 1 to 524)
  AUTHORS   Courtney,H.S., Li,Y., Dale,J.B. and Hasty,D.L.
  TITLE     Cloning, sequencing, and expression of a
            fibronectin/fibrinogen-binding protein from group A streptococci
  JOURNAL   Infect Immun 62 (9), 3937-3946 (1994)
   PUBMED   8063411
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017482.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05670.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..524
                     /product="NFACT RNA binding domain-containing protein"
                     /calculated_mol_wt=60473
     Region          <193..524
                     /region_name="RqcH"
                     /note="Ribosome quality control (RQC) protein RqcH,
                     Rqc2/NEMF/Tae2 family, contains fibronectin-(FbpA) and
                     RNA- (NFACT) binding domains [Translation, ribosomal
                     structure and biogenesis, Posttranslational modification,
                     protein turnover, chaperones]; COG1293"
                     /db_xref="CDD:440904"
ORIGIN      
        1 mhhnyyflkq laprlnqelt gkkfieafsq ekdeivlvfa eseideelkk pffikatlrs
       61 dfaclsfpdk fdrarrnsvn lftdlyqqqi ihvrvfvner aieiifksge vlvlklfgnr
      121 snlisfskeg svlqlfnnkl atdqtlsldn mdrqldqsyd afvkneyhfe plfptfgklv
      181 nnhlkkllne tgepekrwvi vqdvlkkleq ptfyltkiel vpilsllplg evvdsykdpi
      241 ealnayyyaf irltgiekek aeilrilrkr isqtdnylen tfkklvalee gtkndeiani
      301 lmanlhlipe raesvelydf yrdqpikirl kkdltpqkta egyyrkskne kieiarlhds
      361 learenerek mlgyvksies iemlrelrtf iksnglaggn tvsveqadlf kkvifsgyti
      421 ligknaknnd lltkqyahke dlwlhardvt gshvviknqs gkkfpspvie raaqlaawhs
      481 krktdslcpv ivtpkkyvrk pkglpegavv idkedvimvv ptpe
//
LOCUS       WP_235153885             662 aa            linear   BCT 02-MAR-2025
DEFINITION  maltotransferase domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235153885
VERSION     WP_235153885.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 662)
  AUTHORS   Syson,K., Stevenson,C.E.M., Rejzek,M., Fairhurst,S.A., Nair,A.,
            Bruton,C.J., Field,R.A., Chater,K.F., Lawson,D.M. and Bornemann,S.
  TITLE     Structure of Streptomyces maltosyltransferase GlgE, a homologue of
            a genetically validated anti-tuberculosis target
  JOURNAL   J Biol Chem 286 (44), 38298-38310 (2011)
   PUBMED   21914799
REFERENCE   2  (residues 1 to 662)
  AUTHORS   MacGregor,E.A., Janecek,S. and Svensson,B.
  TITLE     Relationship of sequence and structure to specificity in the
            alpha-amylase family of enzymes
  JOURNAL   Biochim Biophys Acta 1546 (1), 1-20 (2001)
   PUBMED   11257505
REFERENCE   3  (residues 1 to 662)
  AUTHORS   Janecek,S., Svensson,B. and Henrissat,B.
  TITLE     Domain evolution in the alpha-amylase family
  JOURNAL   J Mol Evol 45 (3), 322-331 (1997)
   PUBMED   9302327
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023324.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11896.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..662
                     /product="maltotransferase domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /calculated_mol_wt=76442
     Region          18..195
                     /region_name="GlgE_dom_N_S"
                     /note="Alpha-1,4-glucan:maltose-1-phosphate
                     maltosyltransferase, domain N/S; pfam11896"
                     /db_xref="CDD:463388"
     Region          204..557
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
     Site            order(318,386,388,417,474..475)
                     /site_type="active"
                     /db_xref="CDD:200451"
     Site            order(388,417,475)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:200451"
ORIGIN      
        1 mnndtgiagl ailhndpvvi envipqidhg kfpvkviegd tffvqadifa ngnnslaari
       61 lykhesennw retylkpivn drwegqfpve ktgsykykik awidpiatwq semvrrvhhy
      121 lsltdllstg vsllesmagk askedktlvk eairifkdqk radeagqlam sfrftewlnr
      181 ypdttlstet fdfeiisnhk kvefsswytm fprsaspfkg rhgtfqdvvn llprianmgf
      241 dvlnfppihp ignekrkgkn ggkklehddp gspyatgnsy gghetvhpel gtfddfkdlv
      301 aeakkhdisi aldfalqfsp dhpwltghpd wfekqssgss dltaspnstq pdflrlkint
      361 gnseeiknav lqilqvwidc gvqifriaep dfypvgwwqe iihevntksp eiifyagtvt
      421 rpkvmnylak sgfalsdsyf mwrnsgyelq qyineiayse qkdffrpifr inspdlnpyn
      481 lqsghepqql irfflaatls gcygiygpvf eqlvyeafpg kedywnseky eikhwdweke
      541 tkitylitmi nkirkenqal qqtnrihtca vqndqilayy kshdngnkil cvvnlnahhr
      601 qsgmvqvplh linknhdeif iahdlitdar yewrgewnyv eldphilpfh llriedyyge
      661 yy
//
LOCUS       WP_235153907             223 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235153907
VERSION     WP_235153907.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..223
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=25293
     Region          <55..193
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mseklvdshk ynlwkgnlek ngldihgiee vysrrngnge ilfsllmtda ttpegdkipp
       61 icflkgevvc vlicfieket rekflllvrq rricdgslty ehpagmldse sdaasvaare
      121 vfeetgisip keelvelnkd pffpstgtsd eamylfysei eltseqiasy hnqtqglisd
      181 hefitthvvp fteghklitn vngilldymy lkhvedwelm kki
//
LOCUS       WP_235153603             174 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF892 family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235153603
VERSION     WP_235153603.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 174)
  AUTHORS   Hindupur,A., Liu,D., Zhao,Y., Bellamy,H.D., White,M.A. and Fox,R.O.
  TITLE     The crystal structure of the E. coli stress protein YciF
  JOURNAL   Protein Sci 15 (11), 2605-2611 (2006)
   PUBMED   17001035
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017758.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05974.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..174
                     /product="DUF892 family protein"
                     /calculated_mol_wt=20045
     Region          11..161
                     /region_name="YciE"
                     /note="Ferritin-like metal-binding protein YciE [Inorganic
                     ion transport and metabolism]; COG3685"
                     /db_xref="CDD:442901"
ORIGIN      
        1 mdkdqkkiry qelflselrn shfgekkied alremetktn meklasalks iwkktdenik
       61 eletvfpkse iktpvpvnhs tdneevkvtf eplkiksgkt emekkhhttt dmtnfqvvsy
      121 dhllalveel didqvkeils svtieekssh qylsklaetl lkdsevkkvp dskp
//
LOCUS       WP_235153968             501 aa            linear   BCT 02-MAR-2025
DEFINITION  RagB/SusD family nutrient uptake outer membrane protein
            [Dyadobacter sp. CY345].
ACCESSION   WP_235153968
VERSION     WP_235153968.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 501)
  AUTHORS   Goulas,T., Garcia-Ferrer,I., Hutcherson,J.A., Potempa,B.A.,
            Potempa,J., Scott,D.A. and Gomis-Ruth,F.X.
  TITLE     Structure of RagB, a major immunodominant outer-membrane surface
            receptor antigen of Porphyromonas gingivalis
  JOURNAL   Mol Oral Microbiol 31 (6), 472-485 (2016)
   PUBMED   26441291
REFERENCE   2  (residues 1 to 501)
  AUTHORS   Bolam,D.N. and Koropatkin,N.M.
  TITLE     Glycan recognition by the Bacteroidetes Sus-like systems
  JOURNAL   Curr Opin Struct Biol 22 (5), 563-569 (2012)
   PUBMED   22819666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07980.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..501
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /calculated_mol_wt=55400
     Region          <128..461
                     /region_name="SusD"
                     /note="starch binding outer membrane protein SusD;
                     cl21747"
                     /db_xref="CDD:451378"
ORIGIN      
        1 mkkiiiasil aaslsitsce knfdpvitgv lspanfpkte ddfklytlqa ykpfgskwgy
       61 sdvayqnmff speyghlamf dlptdqmnif tewggfweff skgdftflrt qgkqshfekv
      121 ryvtrmtqvi adiekatisd aaknkfiaea rmgrawtmyy llhmygpvpv ifdaskintd
      181 aesdltrpsr etyvsliadd lnfaaanldl spseygrfnk glalgmltrl ylneknwaea
      241 eksaratial gkyslvsdya glfreptevn tetiwavncd piaptngegg gnfnamalyc
      301 lpgdfksikl gggwgnpsgi fcptwafydt fdeadkrrnl liatytdktg karnrtnmrg
      361 pvlrkypdes spgadvqgnd mpvlryadvl lmlaeavnqi sgptaeaial vnevrtkhgg
      421 vaalsatata sktafndail lergfefyfe girkidlvrh gkwasaleaa gkvnhgpsel
      481 fpipqyvinv gegkieqtpg y
//
LOCUS       WP_235153985              53 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235153985
VERSION     WP_235153985.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024908.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13518.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..53
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..53
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=6040
     Region          3..>45
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 mgnisvtarr cgiarstlqr wrsaarlkrq neeklvdrsh rpkrlgcqkf snc
//
LOCUS       WP_235153993             224 aa            linear   BCT 02-MAR-2025
DEFINITION  VTT domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235153993
VERSION     WP_235153993.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Morita,K., Hama,Y., Izume,T., Tamura,N., Ueno,T., Yamashita,Y.,
            Sakamaki,Y., Mimura,K., Morishita,H., Shihoya,W., Nureki,O.,
            Mano,H. and Mizushima,N.
  TITLE     Genome-wide CRISPR screen identifies TMEM41B as a gene required for
            autophagosome formation
  JOURNAL   J Cell Biol 217 (11), 3817-3828 (2018)
   PUBMED   30093494
REFERENCE   2  (residues 1 to 224)
  AUTHORS   Inadome,H., Noda,Y., Kamimura,Y., Adachi,H. and Yoda,K.
  TITLE     Tvp38, Tvp23, Tvp18 and Tvp15: novel membrane proteins in the
            Tlg2-containing Golgi/endosome compartments of Saccharomyces
            cerevisiae
  JOURNAL   Exp Cell Res 313 (4), 688-697 (2007)
   PUBMED   17178117
REFERENCE   3  (residues 1 to 224)
  AUTHORS   Inadome,H., Noda,Y., Adachi,H. and Yoda,K.
  TITLE     Immunoisolaton of the yeast Golgi subcompartments and
            characterization of a novel membrane protein, Svp26, discovered in
            the Sed5-containing compartments
  JOURNAL   Mol Cell Biol 25 (17), 7696-7710 (2005)
   PUBMED   16107716
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020893.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09335.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..224
                     /product="VTT domain-containing protein"
                     /calculated_mol_wt=24954
     Region          1..204
                     /region_name="SNARE_assoc"
                     /note="SNARE associated Golgi protein; cl00429"
                     /db_xref="CDD:469768"
ORIGIN      
        1 meffngildi ffhldkhlgh iieqygawty filfliifie tgvvfmpflp gdsllfaagi
       61 maakysdsln iwlivgllil aailgdscny ligrrfggki qqirlfgksm ikpehlahtq
      121 gfydkygast iviarfvpiv rtlapfvggi aamnysvffk fniigailwv vsltfagyfl
      181 gniplvrdnf ekvvlgival svlpiiwqll kgklrsfsrp kaiv
//
LOCUS       WP_235154048             928 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6797 domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235154048
VERSION     WP_235154048.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042902.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20601.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..928
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..928
                     /product="DUF6797 domain-containing protein"
                     /calculated_mol_wt=102295
     Region          91..201
                     /region_name="DUF6797"
                     /note="Domain of unknown function (DUF6797); pfam20601"
                     /db_xref="CDD:466750"
     Region          357..679
                     /region_name="YliI"
                     /note="Glucose/arabinose dehydrogenase, beta-propeller
                     fold [Carbohydrate transport and metabolism]; COG2133"
                     /db_xref="CDD:441736"
     Region          830..926
                     /region_name="Cyc7"
                     /note="Cytochrome c2 [Energy production and conversion];
                     COG3474"
                     /db_xref="CDD:442697"
ORIGIN      
        1 mfsilgfskk yigvvmllag flvsalmlta ytdkktelya spdslilnpf vepdfpfist
       61 sldarklgph fpednisars lalqlgdsay acfdtdllrw svgwtgkflp mvlmaqisyk
      121 dffnknnkvt tvtgspkiat glyagwsegk pdfidpreep eianeikwgs mpaekgrwng
      181 vfvygekavl nysvgkasvy elpesirfed qtvfvrkfqi enagkelyln aaevtnasgs
      241 evkgkiayvy qgankdtvta iavlgkatln mqpevtknqy mtvriapsnk rgegtilvwk
      301 gpankksafe klckkkhitl pdfrkggesh wgqavitsge lapdtaayvt dkltlplnnp
      361 wkrnvrvadi sfykngrata vtfegdvwmi dgidknlksi rwkrfasglh eplsievvrd
      421 tvyvfgregi vrlhdlnedg eadfyenfsn vvtqspesre waadmvyapd gsfyvakggt
      481 qsngpgvtsq vtkgfragsk hngtilkisp dgrsyeviat glrgpyigih pekgtltasd
      541 qqgnfvpstp iylikkgdyy gvpasahrkd nppiappltw iphrvdrssi sqawvtgnkm
      601 gplngdlihf sfahpglfrv lidsaasipq ggisfiqady paptskgamn pidgqlyitg
      661 fnlwgssssg isalmrlryt gkqmylpnqf qaakqgivlg fdteldgtgl nvsdfavkrw
      721 nykrteeygs ghfkldgtsg eetlevagay lstdrkkill lvpdmqdvmq mevaykikaa
      781 dgknindrfw ftinnlsqlk sqsdfskvdf svlekkkvqs eskpetelaa saekgkdifq
      841 kmacagchsa glvtkgmygp pfqnlykser rfednstaia denyiresil tpsakivkgy
      901 neempsfvgi lsetdiasvt lyikslkk
//
LOCUS       WP_235154072             176 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF892 family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235154072
VERSION     WP_235154072.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 176)
  AUTHORS   Hindupur,A., Liu,D., Zhao,Y., Bellamy,H.D., White,M.A. and Fox,R.O.
  TITLE     The crystal structure of the E. coli stress protein YciF
  JOURNAL   Protein Sci 15 (11), 2605-2611 (2006)
   PUBMED   17001035
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017758.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05974.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..176
                     /product="DUF892 family protein"
                     /calculated_mol_wt=20397
     Region          25..161
                     /region_name="Ferritin_like"
                     /note="Ferritin-like superfamily of diiron-containing
                     four-helix-bundle proteins; cl00264"
                     /db_xref="CDD:469698"
     Site            order(37,67,70,126,159)
                     /site_type="other"
                     /note="dinuclear metal binding motif [ion binding]"
                     /db_xref="CDD:153097"
ORIGIN      
        1 mktdsprsef dqhyeiannp etfhfflsni qhvywaeniq lktfskwall vnsqelrksv
       61 ldymlvtagq vqhiehifei laqktkgkid ttlsdlirdi eiitentkta asaadsvivk
      121 alceiasyqi evyeklnsla krlkhykise liektlkeeh eifryfqnfg trltns
//
LOCUS       WP_235154121             218 aa            linear   BCT 02-MAR-2025
DEFINITION  dual OB domain-containing protein [Dyadobacter sp. CY345].
ACCESSION   WP_235154121
VERSION     WP_235154121.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 218)
  AUTHORS   Burroughs,A.M. and Aravind,L.
  TITLE     New biochemistry in the Rhodanese-phosphatase superfamily: emerging
            roles in diverse metabolic processes, nucleic acid modifications,
            and biological conflicts
  JOURNAL   NAR Genom Bioinform 5 (1), lqad029 (2023)
   PUBMED   36968430
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047206.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22557.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..218
                     /product="dual OB domain-containing protein"
                     /calculated_mol_wt=24690
ORIGIN      
        1 mtirfvclan sikeggrcla gielnnnnep iigkngpkwi rpicntqhgk iythwvthik
       61 lldiveiest gipvkpsyqs eniffkdeql nvvgrfnrng lnklvdnryy ifgnwgkals
      121 tdeivfldhs lvllrvnefq vtekinpddp gkkkirlqfs ynetkydfpv tdpvfsqlyt
      181 nnpailnvig slylcvsigi nfngwyyklv agiipgpp
//
LOCUS       WP_235154189             887 aa            linear   BCT 02-MAR-2025
DEFINITION  TcfC E-set like domain-containing protein [Escherichia coli].
ACCESSION   WP_235154189
VERSION     WP_235154189.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028277.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16967.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..887
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..887
                     /product="TcfC E-set like domain-containing protein"
                     /calculated_mol_wt=99964
     Region          28..869
                     /region_name="PRK15310"
                     /note="fimbrial outer membrane usher protein TcfC;
                     Provisional"
                     /db_xref="CDD:185210"
ORIGIN      
        1 mkktffilfg lslsplslga pealnvipna vpkefrtlwa gqdeivevyf ygsslgmfri
       61 qsmpdsirfy epikivdkln vkpeirekvq rllstplsrn gnlscpkgtl dnekgcgfir
      121 tdgaavifne ndetlnlfvn rnfllstann enqfretteg dnafihsqsl nvsdnrqyqs
      181 lfasgigtlg itqdsyvtad wqfsylrnkg kqndtmdlrd tsirniyyry diarryyiqs
      241 grmdstelfk nsggnfsfsl lpvpsidgmr igttqsylrp rnsatatpvt vllshfsrie
      301 ayrdnqligt fyldsgikel dtqmfpegsy tldlrffegn hlvrterlpf skwngltgss
      361 lwnfflqggk insetsttam kknkdllltg irfplgnssi fqqgiaflsn kqyaessldw
      421 ggaiwdgsfn ariawlwgsd nvtgnsenis yndgfslsfy hqqqrgsvyn sersdylnwt
      481 gnnetysvlf svplfswqts lgynyninns nvysycynnc dqynpvwqiy hgksrtwqin
      541 isrsflwdkw slmpslgihn shqetsftsq tdrgiyftlt msrndtiahs sqrnitagys
      601 mnhsstggsq nniyvasqwv rdtdlqhqel etringrddn yegmirarmn nrfgdlngsl
      661 svsrnksfgn drsftllyds slalnhqglt wggnasgien lagdiitvda epqgiplvqi
      721 rgeqtlaldg gqrslipvta ltetelnlne ivtgqmnvhl sqtqnrkqfl vpghvyshti
      781 kartswtytg raldslgkpl snaavlnigs vrldsdggfs fehdrkdnai yvlkdkmiyr
      841 cpvkatprnd aliflgtmic ekssennlps yithvttdde gttagrq
//
LOCUS       WP_235153914             492 aa            linear   BCT 02-MAR-2025
DEFINITION  diadenylate cyclase [Dyadobacter sp. CY345].
ACCESSION   WP_235153914
VERSION     WP_235153914.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 492)
  AUTHORS   He,J., Yin,W., Galperin,M.Y. and Chou,S.H.
  TITLE     Cyclic di-AMP, a second messenger of primary importance: tertiary
            structures and binding mechanisms
  JOURNAL   Nucleic Acids Res 48 (6), 2807-2829 (2020)
   PUBMED   32095817
REFERENCE   2  (residues 1 to 492)
  AUTHORS   Witte,G., Hartung,S., Buttner,K. and Hopfner,K.P.
  TITLE     Structural biochemistry of a bacterial checkpoint protein reveals
            diadenylate cyclase activity regulated by DNA recombination
            intermediates
  JOURNAL   Mol Cell 30 (2), 167-178 (2008)
   PUBMED   18439896
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014510.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02457.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..492
                     /product="diadenylate cyclase"
                     /calculated_mol_wt=54994
     Region          380..489
                     /region_name="DAC"
                     /note="DisA bacterial checkpoint controller
                     nucleotide-binding; pfam02457"
                     /db_xref="CDD:460563"
ORIGIN      
        1 msnlhwnrqk scqksiesaa gkffslldpg llpqvsllgv dpekpvnets lfleqadsil
       61 eindfiqihv larqlgistg tsrikssrkk vtgsqidrar frgyklavqk llialpafed
      121 kqlhvsapce igpylvfiil tlpreviary ftlqrsendg qtspshsvie saisvflsec
      181 rghlqesqfr krfidrsaee llksagrdfm ttiedsiefr pdqislfdai dnvsmlryeg
      241 rdaigkilla keghtnivft lrlskpipln dsrkvrklle lgdqnscvvc dgqhllglgr
      301 argnynpkqn slycinfkgh ykwellhdes pllsvchglp kirmegidhs yftaqvnqvf
      361 kglnaseier lweitlsatk qkagtmivis dhakseskrl anqcfkvepl vltqelvnqi
      421 taidgavlld qdcvchaigv ildgivsdkq gdasrgaryn sairyfstnr pkhsiliiii
      481 sedgminlip ne
//
LOCUS       WP_235154341             736 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-hairpin-helix domain-containing protein [Pseudomonas
            nitroreducens].
ACCESSION   WP_235154341
VERSION     WP_235154341.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas nitroreducens
  ORGANISM  Pseudomonas nitroreducens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 736)
  AUTHORS   Ramos,C., Hernandez-Tamayo,R., Lopez-Sanz,M., Carrasco,B.,
            Serrano,E., Alonso,J.C., Graumann,P.L. and Ayora,S.
  TITLE     The RecD2 helicase balances RecA activities
  JOURNAL   Nucleic Acids Res 50 (6), 3432-3444 (2022)
   PUBMED   35234892
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025843.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14490.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..736
                     /organism="Pseudomonas nitroreducens"
                     /db_xref="taxon:46680"
     Protein         1..736
                     /product="helix-hairpin-helix domain-containing protein"
                     /calculated_mol_wt=80214
     Region          161..238
                     /region_name="HHH_4"
                     /note="Helix-hairpin-helix containing domain; pfam14490"
                     /db_xref="CDD:464187"
     Region          <402..481
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 mtpqqdngae slnrergtlv divfrdpagp wsvctfrrdd ntsftgtgnf gnailyedyi
       61 lygkrvpdld gadfdvsqft smppakvesl vgylsdltkv prsvtskavq hfgenlipil
      121 dqsptrlvea gisvpeaqal gqawatqrse qlalahidve gippaklatl qrrlgytanl
      181 sevlkedpyl lyvhfedilf ssaqnlakrf gvtsntvsav kgavigvlrr eawlghsyve
      241 grplieavmk mlrltkdeir pliaqavtdl amakvvhasn gqlqllslhd aekslatlvq
      301 kwaglgcsdl edlvptdkma akllkpleld aqatkslsag lrsllserfa lvqcetlddq
      361 mavirgldlf lsgfgadavy saytsemade vsrlitddtv vftysaligi dpktgvpaqh
      421 gkrpinadvl iiagadslgv eemvnilrav petsrvymlg avkdlpahsi gqpfselaqa
      481 gpsrtfqasf wlsarthqre asrriwsgtl kansesfdpc qaiswlpvpt dllnetlplv
      541 lrefaqqlei dplqdirvva psargsaged llgpmaaaia reftgeerlv efhgkglfkg
      601 lpfvvrqsva stnhppfsvf taadlnperl davdrlgnqf rlnlaqrldv fqgavmtpkl
      661 frgrvyevvv lvvregqqal instllstll nsarttlliv galdglltgy tereptmars
      721 llikrmnpdv dqistt
//
LOCUS       WP_235154346             361 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Pseudomonas nitroreducens].
ACCESSION   WP_235154346
VERSION     WP_235154346.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas nitroreducens
  ORGANISM  Pseudomonas nitroreducens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Pseudomonas nitroreducens"
                     /db_xref="taxon:46680"
     Protein         1..361
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=37562
     Region          1..351
                     /region_name="MFS_ArsK"
                     /note="arsenite efflux MFS transporter ArsK; NF033733"
                     /db_xref="CDD:468156"
ORIGIN      
        1 mlaspiardt gwslsavvgg lswgmlvagl cspvagrlle rhggrvvlaf sslmlsvgll
       61 vmstasslwv yylswsilgl gmasglydsa fatlgtllga rargaitglt liggfastag
      121 wpamaalesw cgwretcwvl aavhaviglp ihwlavpkpv nvakevpkqr qialaedrst
      181 rqlfwlvagl ltviafvmas lsvhlltslq qlgiptvtvl aigmvigpaq vvarvlefsl
      241 arhlhptwsa rvgvlislig icllipgtpw lafvaaalyg agvgiltiar gtlplvlfga
      301 egygarmgvl arpmllaqaa gpfaaafvls gqrasvmlel mavlvaialf aslklptrsl
      361 v
//
LOCUS       WP_235154383             224 aa            linear   BCT 02-MAR-2025
DEFINITION  fimbria/pilus periplasmic chaperone [Escherichia coli].
ACCESSION   WP_235154383
VERSION     WP_235154383.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Holmgren,A. and Branden,C.I.
  TITLE     Crystal structure of chaperone protein PapD reveals an
            immunoglobulin fold
  JOURNAL   Nature 342 (6247), 248-251 (1989)
   PUBMED   2478891
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012565.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00345.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..224
                     /product="fimbria/pilus periplasmic chaperone"
                     /GO_component="GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA]"
                     /GO_process="GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /calculated_mol_wt=24735
     Region          1..224
                     /region_name="PRK15253"
                     /note="putative fimbrial assembly chaperone protein StcB;
                     Provisional"
                     /db_xref="CDD:185165"
ORIGIN      
        1 mkgllsllif smvlpahagi viygtriiyp aenkevmvql mnqgnrssll qawiddgdts
       61 lppekiqvpf mltppvakig ansgqqvkik impnklptnk esifylnvld ippnspeqeg
      121 knalkfamqn riklfyrpag iapvnkatfk kllvsrsgng lvikndsanw vtisdvkann
      181 vkvnyetimi aplesqsvnv ksnntnnwyl tiiddhgnyi sdki
//
LOCUS       WP_235154389             219 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4145 domain-containing protein [Escherichia coli].
ACCESSION   WP_235154389
VERSION     WP_235154389.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025027.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13643.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..219
                     /product="DUF4145 domain-containing protein"
                     /calculated_mol_wt=24390
     Region          88..162
                     /region_name="DUF4145"
                     /note="Domain of unknown function (DUF4145); pfam13643"
                     /db_xref="CDD:433374"
ORIGIN      
        1 maeyypavfe aeafncpycn vyarqrwrrm ygtsntlpsr asefrmssca hcdedafwyh
       61 gsmiipaagn velpnpdmpd dcksdymear sivnlspkga aallrlslqk lmvhlgepgk
      121 hidtdikslv akglsplvqr aadicrivgn qavhpgqinl dddpqlahgl fkllniivte
      181 qitrpkevea mfnsmpegql kgiedrdrka reqqqaane
//
LOCUS       WP_235154446              86 aa            linear   BCT 02-MAR-2025
DEFINITION  protein rep, partial [Escherichia coli].
ACCESSION   WP_235154446
VERSION     WP_235154446.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 86)
  AUTHORS   Marsin,S. and Forterre,P.
  TITLE     A rolling circle replication initiator protein with a
            nucleotidyl-transferase activity encoded by the plasmid pGT5 from
            the hyperthermophilic archaeon Pyrococcus abyssi
  JOURNAL   Mol Microbiol 27 (6), 1183-1192 (1998)
   PUBMED   9570403
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013603.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01446.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..86
                     /product="protein rep"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
     Region          <1..74
                     /region_name="Rep_1"
                     /note="Replication protein; cl02412"
                     /db_xref="CDD:470569"
ORIGIN      
        1 stkpadmvad pewfleltrq thkrrfvatg gvlkdvlkld qetdadmvig ddisegdddg
       61 sriafewkte vrkyrrsptk dktese
//
LOCUS       WP_235153737             483 aa            linear   BCT 02-MAR-2025
DEFINITION  arginine deiminase family protein [Dyadobacter sp. CY345].
ACCESSION   WP_235153737
VERSION     WP_235153737.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 483)
  AUTHORS   Shirai,H. and Mizuguchi,K.
  TITLE     Prediction of the structure and function of AstA and AstB, the
            first two enzymes of the arginine succinyltransferase pathway of
            arginine catabolism
  JOURNAL   FEBS Lett 555 (3), 505-510 (2003)
   PUBMED   14675764
REFERENCE   2  (residues 1 to 483)
  AUTHORS   Shirai,H., Blundell,T.L. and Mizuguchi,K.
  TITLE     A novel superfamily of enzymes that catalyze the modification of
            guanidino groups
  JOURNAL   Trends Biochem Sci 26 (8), 465-468 (2001)
   PUBMED   11504612
REFERENCE   3  (residues 1 to 483)
  AUTHORS   D'Hooghe,I., Vander Wauven,C., Michiels,J., Tricot,C., de Wilde,P.,
            Vanderleyden,J. and Stalon,V.
  TITLE     The arginine deiminase pathway in Rhizobium etli: DNA sequence
            analysis and functional study of the arcABC genes
  JOURNAL   J Bacteriol 179 (23), 7403-7409 (1997)
   PUBMED   9393705
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014344.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02274.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..483
                     /product="arginine deiminase family protein"
                     /calculated_mol_wt=55152
     Region          8..483
                     /region_name="ArcA"
                     /note="Arginine deiminase [Amino acid transport and
                     metabolism]; COG2235"
                     /db_xref="CDD:441836"
ORIGIN      
        1 mksdksisst invssevgtl rrllihspdr glgkvipska qdwlfedivh ldtmrkgeyd
       61 fyvklllyfl dpekikgklr eidsdisrsf yipgsenyfn sdkvvdiqkl laeilqdenv
      121 rikltaaicg iercsyqtqn elntfdpiel akifisgsls dkrmlfaplp nlifmrdigi
      181 vindhillnk paksartres ilaqfvffhh pmfadmkeni ieipengrhf llpddekgse
      241 fhrctleggd vmmvaprhll igcsertsvy aaqevmkilf eknvvdtiti ikipkkrdym
      301 hidtiftqvk knvwvllssl grlgdeakkk dvlhffapke tnpqfqilqf ikglehkpie
      361 ienledllad isrndlgsre evqfiysgnn qfpygereqw tdscnllalk dgvvigydrn
      421 dktldafrnk gfriikakdl lekfesgels petltdtfit lpsaelsrar ggshcmsmpi
      481 lrd
//
LOCUS       WP_235154537              39 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-ketoacyl synthase N-terminal-like domain-containing protein,
            partial [Escherichia coli].
ACCESSION   WP_235154537
VERSION     WP_235154537.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 39)
  AUTHORS   Huang,W., Jia,J., Edwards,P., Dehesh,K., Schneider,G. and
            Lindqvist,Y.
  TITLE     Crystal structure of beta-ketoacyl-acyl carrier protein synthase II
            from E.coli reveals the molecular architecture of condensing
            enzymes
  JOURNAL   EMBO J 17 (5), 1183-1191 (1998)
   PUBMED   9482715
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012337.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00109.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..39
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>39
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
     Region          3..>39
                     /region_name="cond_enzymes"
                     /note="Condensing enzymes; Family of enzymes that catalyze
                     a (decarboxylating or non-decarboxylating) Claisen-like
                     condensation reaction. Members are share strong structural
                     similarity, and are involved in the synthesis and
                     degradation of fatty acids, and the...; cl09938"
                     /db_xref="CDD:447866"
ORIGIN      
        1 mskrrvvvtg lgmlspvgnt vestwkalla gqsgislid
//
LOCUS       WP_235154563              97 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4942 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235154563
VERSION     WP_235154563.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025085.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13708.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>97
                     /product="DUF4942 domain-containing protein"
     Region          <4..95
                     /region_name="DUF4942"
                     /note="Domain of unknown function (DUF4942); pfam13708"
                     /db_xref="CDD:433419"
ORIGIN      
        1 lvrwdrwgfh litgqqadrl adlermlhlf sgkpipdnre nitirlddhi qsvqgkesye
       61 demfsiryfk kgsahitfrk pelvdrlndi iakrypg
//
LOCUS       WP_235154566              45 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4942 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235154566
VERSION     WP_235154566.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025085.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13708.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..45
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..45
                     /product="DUF4942 domain-containing protein"
     Region          <2..38
                     /region_name="DUF4942"
                     /note="Domain of unknown function (DUF4942); pfam13708"
                     /db_xref="CDD:433419"
ORIGIN      
        1 syedemfsir yfkkgsahit frkpelvdrl ndiiakrypg qlsai
//
LOCUS       WP_235154622             303 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase, partial [Escherichia coli].
ACCESSION   WP_235154622
VERSION     WP_235154622.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 303)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 303)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..303
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          27..105
                     /region_name="Phage_int_SAM_1"
                     /note="Phage integrase, N-terminal SAM-like domain;
                     cl12235"
                     /db_xref="CDD:472283"
     Region          130..298
                     /region_name="INT_Lambda_C"
                     /note="C-terminal catalytic domain of Lambda integrase, a
                     tyrosine-based site-specific recombinase; cd00800"
                     /db_xref="CDD:271181"
     Site            order(130,133..134,136..137,147)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:271181"
     Site            order(159,255,258,280,289)
                     /site_type="active"
                     /db_xref="CDD:271181"
ORIGIN      
        1 lrefslqdsr ggsrinsdns vtlhswldry ekilasrgik qktlinymsk ikairrglpd
       61 apledittke iaamlngyid egkaasakli rstlsdafre aiaeghittn pvaatraaks
      121 evrrsrltad eylkiyqaae sspcwlrlam elavvtgqrv gdlcemkwsd ivdgylyveq
      181 sktgvkiaip ttlhvdalgi smketldkck eilggetiia strreplssg tvsryfmrar
      241 kasglsfegd pptfhelrsl sarlyekqis dkfaqhllgh ksdtmasqyr ddrgrewdki
      301 eik
//
LOCUS       WP_235154641             108 aa            linear   BCT 02-MAR-2025
DEFINITION  Ail/Lom family outer membrane beta-barrel protein, partial
            [Escherichia coli].
ACCESSION   WP_235154641
VERSION     WP_235154641.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 108)
  AUTHORS   Miller,V.L., Beer,K.B., Heusipp,G., Young,B.M. and Wachtel,M.R.
  TITLE     Identification of regions of Ail required for the invasion and
            serum resistance phenotypes
  JOURNAL   Mol Microbiol 41 (5), 1053-1062 (2001)
   PUBMED   11555286
REFERENCE   2  (residues 1 to 108)
  AUTHORS   Barondess,J.J. and Beckwith,J.
  TITLE     A bacterial virulence determinant encoded by lysogenic coliphage
            lambda
  JOURNAL   Nature 346 (6287), 871-874 (1990)
   PUBMED   2144037
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06316.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..108
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /GO_component="GO:0044384 - host outer membrane [Evidence
                     IEA]"
     Region          <1..108
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 vrnrwfsvma gpsvrvnewf sayamagmay srvstfsgdy lrvtdnkgkt hdvltgsddg
       61 rhsntslawg agvqvnptes vaidiayecs gsgdwrtdgf ivgvgykf
//
LOCUS       WP_235154675              72 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1737 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235154675
VERSION     WP_235154675.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08410.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>72
                     /product="DUF1737 domain-containing protein"
     Region          5..50
                     /region_name="DUF1737"
                     /note="Domain of unknown function (DUF1737); cl10503"
                     /db_xref="CDD:471980"
ORIGIN      
        1 msikhydvvr aaspsdlaek lthkrnegwq pyggpvaitp ytlrqavaie gepqvgpsse
       61 pdwyyvivla gq
//
LOCUS       WP_235154677             219 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1627 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235154677
VERSION     WP_235154677.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019406.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07789.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>219
                     /product="DUF1627 domain-containing protein"
     Region          2..>48
                     /region_name="MntR"
                     /note="Mn-dependent transcriptional regulator MntR, DtxR
                     family [Transcription]; COG1321"
                     /db_xref="CDD:440932"
     Region          88..219
                     /region_name="DUF1627"
                     /note="Protein of unknown function (DUF1627); pfam07789"
                     /db_xref="CDD:429660"
ORIGIN      
        1 metvfdalka mgkatsvela arldisreev lnelwelrka gfvdksvytw rvaynnvqqe
       61 qpapaelsee tttatvakis ecdltatveq rgpqtadela tlfgttsrkv astlamaisk
      121 grlirvnqng kfrycmpgdk lpaepksvpv tendgkafpq sagvalpvqe aatqedikte
      181 tvadivqslp sftetraddl vlpslhmanr elrrakshv
//
LOCUS       WP_235154043             279 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase family 92 protein [Dyadobacter sp. CY345].
ACCESSION   WP_235154043
VERSION     WP_235154043.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY345
  ORGANISM  Dyadobacter sp. CY345
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 279)
  AUTHORS   Hansen,S.F., Harholt,J., Oikawa,A. and Scheller,H.V.
  TITLE     Plant Glycosyltransferases Beyond CAZy: A Perspective on DUF
            Families
  JOURNAL   Front Plant Sci 3, 59 (2012)
   PUBMED   22629278
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 279)
  AUTHORS   Suzuki,N. and Yamamoto,K.
  TITLE     Molecular cloning of pigeon UDP-galactose:beta-D-galactoside
            alpha1,4-galactosyltransferase and UDP-galactose:beta-D-galactoside
            beta1,4-galactosyltransferase, two novel enzymes catalyzing the
            formation of Gal alpha1-4Gal beta1-4Gal beta1-4GlcNAc sequence
  JOURNAL   J Biol Chem 285 (8), 5178-5187 (2010)
   PUBMED   19959475
REFERENCE   3  (residues 1 to 279)
  AUTHORS   Titz,A., Butschi,A., Henrissat,B., Fan,Y.Y., Hennet,T.,
            Razzazi-Fazeli,E., Hengartner,M.O., Wilson,I.B.H., Kunzler,M. and
            Aebi,M.
  TITLE     Molecular basis for galactosylation of core fucose residues in
            invertebrates: identification of caenorhabditis elegans N-glycan
            core alpha1,6-fucoside beta1,4-galactosyltransferase GALT-1 as a
            member of a novel glycosyltransferase family
  JOURNAL   J Biol Chem 284 (52), 36223-36233 (2009)
   PUBMED   19858195
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013830.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01697.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Dyadobacter sp. CY345"
                     /db_xref="taxon:2909335"
     Protein         1..279
                     /product="glycosyltransferase family 92 protein"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=32439
     Region          37..269
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
ORIGIN      
        1 miiggfriqd liqrftnqek kqsyylticc ivkdeneylk ewmnyhikig iehfyiydne
       61 skiavsetlk mlglenyatv ikiygkakqv tayndclkrr safsqwigfi dadefivpks
      121 tsgdlpgflk dfenvgglgi nwlvfgssgy ikrtlrsqlr sflkrsqasf pinrhvkliv
      181 qprfvkrsig ahlfsykkgh favnehfsqi tssysdtsvd kiqinhyycr sleeyqdkve
      241 rgladtskrt rkmedfhnhd reanavedra ileilnrve
//
LOCUS       WP_235154772              78 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF932 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235154772
VERSION     WP_235154772.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017843.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06067.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>78
                     /product="DUF932 domain-containing protein"
     Region          37..>78
                     /region_name="DUF932"
                     /note="Domain of unknown function (DUF932); cl12129"
                     /db_xref="CDD:472280"
ORIGIN      
        1 mrlanrfghv nqirrdrplt heelmhyvps ifgedrhtsr seryayipti tvleslqreg
       61 fqpffacqtr vrdpgrrg
//
LOCUS       WP_235154698             129 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Escherichia coli].
ACCESSION   WP_235154698
VERSION     WP_235154698.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 129)
  AUTHORS   Curcio,M.J. and Derbyshire,K.M.
  TITLE     The outs and ins of transposition: from mu to kangaroo
  JOURNAL   Nat Rev Mol Cell Biol 4 (11), 865-877 (2003)
   PUBMED   14682279
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016847.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04986.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..129
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <4..110
                     /region_name="transpos_IS91"
                     /note="IS91 family transposase; NF033538"
                     /db_xref="CDD:468069"
ORIGIN      
        1 yagqdeiglr ynshrtkree ylvmsgdefm erfswhvadk gfrmvryysf lspvkrrlle
       61 dvvyvitetv rktamqirwr gmyqrslkvd plkcilcgcq mrftglkrgy rltelvlmhe
      121 plaqqrvcg
//
LOCUS       WP_235154750              91 aa            linear   BCT 02-MAR-2025
DEFINITION  type IV toxin-antitoxin system YeeU family antitoxin, partial
            [Escherichia coli].
ACCESSION   WP_235154750
VERSION     WP_235154750.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 91)
  AUTHORS   Masuda,H., Tan,Q., Awano,N., Wu,K.P. and Inouye,M.
  TITLE     YeeU enhances the bundling of cytoskeletal polymers of MreB and
            FtsZ, antagonizing the CbtA (YeeV) toxicity in Escherichia coli
  JOURNAL   Mol Microbiol 84 (5), 979-989 (2012)
   PUBMED   22515815
REFERENCE   2  (residues 1 to 91)
  AUTHORS   Brown,J.M. and Shaw,K.J.
  TITLE     A novel family of Escherichia coli toxin-antitoxin gene pairs
  JOURNAL   J Bacteriol 185 (22), 6600-6608 (2003)
   PUBMED   14594833
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017921.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06154.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..91
                     /product="type IV toxin-antitoxin system YeeU family
                     antitoxin"
                     /GO_process="GO:0051495 - positive regulation of
                     cytoskeleton organization [Evidence IEA]"
     Region          1..87
                     /region_name="CbeA_antitoxin"
                     /note="type IV, cytoskeleton bundling-enhancing factor A;
                     pfam06154"
                     /db_xref="CDD:399275"
ORIGIN      
        1 arlvqegnrl hyladragir grfsdadayh ldqafpllmk qlelmltsge lnprhqhtvt
       61 lyakgltcka dtlgscgyvy lavyptsetk k
//
LOCUS       WP_235154777             147 aa            linear   BCT 02-MAR-2025
DEFINITION  3'-5' exoribonuclease domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_235154777
VERSION     WP_235154777.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 147)
  AUTHORS   Abendroth,J., Ollodart,A., Andrews,E.S., Myler,P.J., Staker,B.L.,
            Edwards,T.E., Arcus,V.L. and Grundner,C.
  TITLE     Mycobacterium tuberculosis Rv2179c protein establishes a new
            exoribonuclease family with broad phylogenetic distribution
  JOURNAL   J Biol Chem 289 (4), 2139-2147 (2014)
   PUBMED   24311791
REFERENCE   2  (residues 1 to 147)
  AUTHORS   Huang,Y.J., Parker,M.M. and Belfort,M.
  TITLE     Role of exonucleolytic degradation in group I intron homing in
            phage T4
  JOURNAL   Genetics 153 (4), 1501-1512 (1999)
   PUBMED   10581261
REFERENCE   3  (residues 1 to 147)
  AUTHORS   Gruber,H., Kern,G., Gauss,P. and Gold,L.
  TITLE     Effect of DNA sequence and structure on nuclease activity of the
            DexA protein of bacteriophage T4
  JOURNAL   J Bacteriol 170 (12), 5830-5836 (1988)
   PUBMED   3056918
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027788.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16473.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>147
                     /product="3'-5' exoribonuclease domain-containing protein"
     Region          <1..>98
                     /region_name="PRK09709"
                     /note="exodeoxyribonuclease VIII"
                     /db_xref="CDD:236615"
     Region          117..>147
                     /region_name="DnaQ_like_exo"
                     /note="DnaQ-like (or DEDD) 3'-5' exonuclease domain
                     superfamily; cl10012"
                     /db_xref="CDD:447876"
ORIGIN      
        1 nspntqqnep etklpepvvq qevekvctac dqtgggncpd cgavmgdaty qetfdeeyqv
       61 evqeddpeem egaehphken tggnqhhnsd netgetadhs ikvnghhkit stsrtcdhlm
      121 idletmgknp dapiisigai ffdpqtg
//
LOCUS       WP_235154790             224 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GTP-binding protein, partial [Enterobacter].
ACCESSION   WP_235154790
VERSION     WP_235154790.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter
  ORGANISM  Enterobacter
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Enterobacter"
                     /db_xref="taxon:547"
     Protein         1..>224
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>224
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 mskekfertk phvnvgtigh vdhgkttlta aittvlakty ggaarafdqi dnapeekarg
       61 itintshvey dtptrhyahv dcpghadyvk nmitgaaqmd gailvvaatd gpmpqtrehi
      121 llgrqvgvpy iivflnkcdm vddeellelv emevrellsq ydfpgddtpi vrgsalkale
      181 gdaeweakii elagyldsyi peperaidkp fllpiedvfs isgr
//
LOCUS       WP_235154933            1093 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5107 domain-containing protein [Escherichia coli].
ACCESSION   WP_235154933
VERSION     WP_235154933.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028438.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17128.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..1093
                     /product="DUF5107 domain-containing protein"
                     /calculated_mol_wt=123763
     Region          40..343
                     /region_name="DUF5107"
                     /note="Domain of unknown function (DUF5107); pfam17128"
                     /db_xref="CDD:407262"
     Region          468..702
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          495..523
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(496,499..500,503..504,506,536,539..540,543..544,
                     546..547,570,573..574,577..578,581)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          534..564
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          569..597
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          618..>816
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          736..924
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          746..772
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          777..808
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mtpvkvwqer veiptyetgp qdihpmflen rvyqgssgav ypygvtdtls eqktlkswqa
       61 vwlendyikv milpelggrv hrawdkvkqr dfvyhnevik palvgllgpw isggiefnwp
      121 qhhrpttfmp vdftleahed gaqtvwvget epmhglqvmt gftlrpdraa leiasrvyng
      181 natprhflww anpavkggeg hqsvfppdvt avfdhgkrav safpiatgty ykvdysagvd
      241 isryknvpvp tsymaeksqy dfvgawchde dggllhvanh hiapgkkqws wghsefgqaw
      301 dksltdnngp yielmtgifa dnqpdftwld ayeekrfeqy flpyhslgmv qnasrdavie
      361 lqrsergiew glyaisplng yrlaireigk cnallddava lmpataiqgv lhginperlt
      421 ielsdadgni vlsyqehqpq elplpdvaka plsaqditst deawfigqhl eqyhhasrsp
      481 fdyylrgval dpldyrcnla lamleynrad fpqavayatq alkrahalnk npqcgqasli
      541 rasayerqgq yqqaeedfwr avwsgnskag gyyglarlaa rngnfdagld fcqqslracp
      601 tnqevlclhn lllvlsgrqd narlqrakll rdyplnatlw wlnwfdgrse salaqwrglc
      661 qgrdvnalmt agqlinwgmp tlaaemlnal dcqrtlplyl qasllpkaer gelvakaidv
      721 fpqfvrfpnt leevaalesi eecwfarhll acfyynkrsy nkaitlwqrc vemspefadg
      781 wrglaihawn kqhdyelaar yldnayqlap qdarllferd lldklsgatp ekrlarlenn
      841 leialkrddm taellnlwhl mgqadkaadi latrkfhpwe ggegkvtsqf ilnqllrawq
      901 hldarqpqqa sellhaalhy penlsegrlp gqtdndiwfw qaicanaqgd eteatrclrl
      961 aatgdrtini hsyyndqpvd ylfwqgmalr llgeqqiaqq lfsemkqwaq emaktsiead
     1021 ffavsqpdll slygdlqqqh kekclmvaml asaglgevaq yesaraelta inpawpkaal
     1081 fttvmpfifn yvh
//
LOCUS       WP_235154944             114 aa            linear   BCT 02-MAR-2025
DEFINITION  ead/Ea22-like family protein [Escherichia coli].
ACCESSION   WP_235154944
VERSION     WP_235154944.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025303.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13935.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..114
                     /product="ead/Ea22-like family protein"
                     /calculated_mol_wt=12780
     Region          2..>73
                     /region_name="Ead_Ea22"
                     /note="Ead/Ea22-like protein; pfam13935"
                     /db_xref="CDD:379401"
ORIGIN      
        1 mseinyqalr eaaqnyqstl awyqenpdsp naeqdcdaal aafkreirhr evdiiadlld
       61 eleeakqrid eqesrtvklp epfklaksss gltyyyadev naaltaagir iege
//
LOCUS       WP_235154988             335 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1202 family protein [Escherichia coli].
ACCESSION   WP_235154988
VERSION     WP_235154988.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018429.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06717.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..335
                     /product="DUF1202 family protein"
                     /calculated_mol_wt=38341
     Region          14..320
                     /region_name="DUF1202"
                     /note="Protein of unknown function (DUF1202); pfam06717"
                     /db_xref="CDD:284194"
ORIGIN      
        1 mkkqwivgta llmlmtgnaw adgeppteni lkdqfkkqyh gilkldaitl knldakgnqa
       61 twsaegdvss sddlytwvgq ladyelleqt wtkdkpvkfs amltskgtpa sgwsvnfysf
      121 qaaasdrgrv vdniktnnky livnsedfny rfsqlesaln tqknsipale kevkaldkqm
      181 vaaqkaaday wgkdangkqm treeafkkih qqrdefnkqn dseafavkyd kevyqpaiaa
      241 chkqseecye vpiqqkrdfd ineqrrqtfl qsqklsrklq ddwvtlekgq ypltmkvsei
      301 nskkvailmk iddinqaner wkkdteqlrr ngvik
//
LOCUS       WP_235155110             236 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1627 domain-containing protein [Escherichia coli].
ACCESSION   WP_235155110
VERSION     WP_235155110.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019406.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07789.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..236
                     /product="DUF1627 domain-containing protein"
                     /calculated_mol_wt=25896
     Region          76..230
                     /region_name="DUF1627"
                     /note="Protein of unknown function (DUF1627); pfam07789"
                     /db_xref="CDD:429660"
ORIGIN      
        1 metvfdalka lkkassqvva srlgisreda vnelwklkrr geadnkgsmw wltqagesep
       61 vspvpkvtaq mlteaieqhg pqtadelalm fgitsrrans slamaiskgr lirvnqdgkf
      121 rycipgadlp aepetasaae tdgkafpqpa gvalpvreae tqeeiktesv avtvqsqpsf
      181 trkhpdslil pslhvanrel rrakgqvqkw ervcaalrel nkcrdilrdi tatreq
//
LOCUS       WP_235155121             648 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6645 domain-containing protein [Escherichia coli].
ACCESSION   WP_235155121
VERSION     WP_235155121.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042725.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20350.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..648
                     /product="DUF6645 domain-containing protein"
                     /calculated_mol_wt=68876
     Region          5..53
                     /region_name="DUF1737"
                     /note="Domain of unknown function (DUF1737); cl10503"
                     /db_xref="CDD:471980"
     Region          83..>277
                     /region_name="SASA"
                     /note="Carbohydrate esterase, sialic acid-specific
                     acetylesterase; pfam03629"
                     /db_xref="CDD:427409"
     Region          492..610
                     /region_name="DUF6645"
                     /note="Family of unknown function (DUF6645); pfam20350"
                     /db_xref="CDD:466500"
ORIGIN      
        1 mtfkhydvvr aaspsdladt laqkiregwq pyggpfssyt ddgaaliqai vaegdvstpv
       61 vvkptggega visatsdpgy yfvvvlagqs ngmsygeglp lpetydrpdp rikqlarrst
      121 vtpggaacky ndiipadhcl hdvqdmsrln hpkadlskgq ygtvgqglhi akkllpfipa
      181 nagillvpcc rggsafttga dgtysdasga senstrwgvd kplykdligr tkaalkknpk
      241 nvlfavvwmq gefdfdgtpg nhaaqfgalv dkfradltdm agqcvggsag gvpwicgdtt
      301 yfwkqknest yqtvygsykn kteknihfvp fmtdengvnv ptnkpeedpd ipgigyygsk
      361 wrdssatwts qdrsshfstw arrgiisdrl atailihagr ttvkvdapss etgaptpsps
      421 eneavstttl lsyraseseg rlteqgwsag ggkaeivade gatggtamkl sketgvgswy
      481 lehdagtgae llkngglisc rfkasgelva nqyvialywp vsslpqgvtl tgdagnnlla
      541 afyiqtdakd lnvmyhnakv atnnlklgsf gafdnewhtl afrfagnnsl qvtpvidgqd
      601 gtpftltqsp vsafaadklh vtditkgaty pvlidsitve vnnadaaa
//
LOCUS       WP_235155122             484 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_235155122
VERSION     WP_235155122.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>484
                     /product="Ig-like domain-containing protein"
     Region          <1..54
                     /region_name="Big_6"
                     /note="Bacterial Ig domain; pfam17936"
                     /db_xref="CDD:465576"
     Region          <43..484
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 tdgdgqpdtt vvvgpggsfe vplnppltng etvtvivtdp agnsstpvta eapdfpdapq
       61 vnasngsvls gtaeagvtiv itdgngnpig qtsadangnw sftpgsqlpd gtvvnvvard
      121 aagnsspats itvdgvapsa pvvepsngse lsgtaepgss vtltdgngnp igqttadang
      181 nwsftpstpl pdgtvvnvva rdaagnsspp asvtvdavap atptvdpsng ttlsgtaepg
      241 atvtltdgng npigqvtadg sgnwtftpst plpngtvvna tatdpsgnas spasvtvdav
      301 apatpvvnps ngttlsgtae pgatvtltdg ngnpigqvta dgsgnwsftp ttplpngtvv
      361 natatdasgn tsagssvtvd svapatpvin psngttlsgt aepgssvtlt dgngnpigqv
      421 tadgsgnwsf tpstpladgt vvnatatdpa gntsgqgstt vdgvapttpt vnlsngssls
      481 gtae
//
LOCUS       WP_235155136             150 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_235155136
VERSION     WP_235155136.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 150)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>150
                     /product="AMP-binding protein"
     Region          1..>150
                     /region_name="PRK12316"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237054"
ORIGIN      
        1 gvelllsqsh lklplaqgvq ridldrgapw fedyseanpd ihldgenlay viytsgstgk
       61 pkgagnrhsa lsnrlcwmqq ayglgvgdtv lqktpfsfdv svweffwplm sgarlvvaap
      121 gdhrdpaklv klinregvdt lhfvpsmlqa
//
LOCUS       WP_235155139            1483 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235155139
VERSION     WP_235155139.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..1483
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..1483
                     /product="Ig-like domain-containing protein"
     Region          <270..505
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
     Region          583..677
                     /region_name="Ca_tandemer"
                     /note="Ca2+-stabilized adhesin repeat; NF033510"
                     /db_xref="CDD:411149"
     Region          1036..>1376
                     /region_name="AidA"
                     /note="Autotransporter adhesin AidA [Cell
                     wall/membrane/envelope biogenesis, Intracellular
                     trafficking, secretion, and vesicular transport]; COG3468"
                     /db_xref="CDD:442691"
ORIGIN      
        1 weecqpgetq ctavfnvvge ngqvteavlt qdgpvlenft agqsgtlsdd drggfiwlgg
       61 lafggglaam alaagggggs khrhenhead tttpsvptlk aendgsvsat lpgdanqgdn
      121 vdvaftdvpv lkipeavdgv nakelkdgvq aevtlptgtv egavitltvt hpdkttrtet
      181 htvskdeaad gtvsmvvpkg svvdgqnsvs vsltqgsnpa kagnkvefvv dgqvpgdtng
      241 dgvadttpvv tipeaadgvn aeelkdgvqa evtvpagsae gdtltltvsk pdgttdtveh
      301 kltakevedg kanvaipadk vttdgeysvt aeitdpagnt sgqgqaaefa vdrvapsape
      361 ltagdngsvs velpgdankg dtveitfede ngdeqkvtle kgdngwtssn palipdsqgd
      421 tatiapdtvk dnsevtavak dpagnestpv tvtsktdgva dapvltipev adsvanaael
      481 kdglqaevtl pagtvegavi tltvthpdqs tenvthnvtg devtagkvsm dipedavvdg
      541 qnsvsvsltq gsnpakagnk vefvvdgqvp gdtngdgvad vtpavtipea tdgvvnaaeq
      601 kdgvqaevtv pagsaegdtv tltvtkpdgk tetvshelta eevkdgkanv sipadkvtqd
      661 geytvkaeit dpagnssgqg kaaqfgvdtv apsepalkae ndgsvsatlp dgankgdkve
      721 vtftdeegne qkvtlekgdg nwssdkpeli pdstgnkvtv padkvknnte vtatakdpgg
      781 nesdpvsvma kaqkgsvins itftdsltde tddkhdftnt gdlkdstpsi mtfpygesde
      841 ryttnyvgnv qssktkfinl atgltndttp tilisldkel nnnqhieitr ykvdidndni
      901 lyevvdeiip sehvdikgkd iivkdqlert ysqyykyefv ikdnvdgkes vtsekefyfl
      961 ldtdieafdi hkidktkdhi lfsgtgennt qvmikyktes geeknvkvvv ddtgkyeinl
     1021 ngwdikdadg aevkivdsag nvksgnlyni arlyvdmntn kaitldsayn iigsqkegtd
     1081 pakalimsdd ndwvyigggi sphigdqspv sennidmagg ddilssvgav ldganinmgd
     1141 gddklytqdg fassgtrnii mgdgndiiyv eksfggknii slgegnnlfi vgnyvnstae
     1201 nditagsgdd kieistnldg knkidlgggd ntiqvggyit nshtitgnsg ddiiyvatni
     1261 dgsgsfnlge gnnnlivggy iqgkntiemg sgddtvsvst riadnvkiql nagddsvyag
     1321 gllnkaivdl gdgddvvtls gisdngkrnn meelvstnam ltggegndtl kingsfklln
     1381 mknisgfeti dlgessenhl dvgiksdmld issssgvkif timggagntv dlgkgnitsh
     1441 nsveqgnytd swskgdtvdg yttytpvgdk svelhiqqdi lvi
//
LOCUS       WP_235155145             483 aa            linear   BCT 02-MAR-2025
DEFINITION  GA-like domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235155145
VERSION     WP_235155145.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 483)
  AUTHORS   Whelan,F., Lafita,A., Gilburt,J., Degut,C., Griffiths,S.C.,
            Jenkins,H.T., St John,A.N., Paci,E., Moir,J.W.B., Plevin,M.J.,
            Baumann,C.G., Bateman,A. and Potts,J.R.
  TITLE     Periscope Proteins are variable-length regulators of bacterial cell
            surface interactions
  JOURNAL   Proc Natl Acad Sci U S A 118 (23) (2021)
   PUBMED   34074781
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047257.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22775.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..483
                     /product="GA-like domain-containing protein"
ORIGIN      
        1 avkalpdtaa ekgglqgrvd aldgiqvpev ndqdgngkad aeeaaaavaa atekveaaea
       61 adkaakdkla elnadklitp eekaqletak qnadtlkgea dsavkalpdt aaekgglqgr
      121 vdaldgiqvp evndqdgngk adaeeaavaf yeralpsnvs gdlypqpsif gdkvssvskn
      181 wstlldsnpg syvtsqrlds ganqynyngh tgsdvisitd sfggldrtqa srfpvglftg
      241 egndlivtgr dygrntsagy tdhshrtdmg ngddtlvvgv gnndvtlyvn eegqlrattd
      301 syngstsidy tglnssssgg tisgtdivmg agndtvlalg yegnsadaii ntnidlgagn
      361 dfiyangeis tnngtqvnii ggegfdtisl dnttvtsamf sgfehvdlhs tshlilnsdd
      421 fksqdiegei lkisgssgas vdvqnfdwen lssandgdvk yftyqstdip gltlwiqegi
      481 evk
//
LOCUS       WP_235155169             226 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Enterobacter hormaechei].
ACCESSION   WP_235155169
VERSION     WP_235155169.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 226)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..226
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=25621
     Region          16..215
                     /region_name="EAL"
                     /note="EAL domain. This domain is found in diverse
                     bacterial signaling proteins. It is called EAL after its
                     conserved residues and is also known as domain of unknown
                     function 2 (DUF2). The EAL domain has been shown to
                     stimulate degradation of a second...; cl29561"
                     /db_xref="CDD:453023"
ORIGIN      
        1 mytvlpspll qrisglrfqp lvdlhsgqvf ahevlveihn vnlevlfasl psrsalqiff
       61 wqantllqip ardaywlnlp aehllderai rlllalrhqq rltieiqdpl titrlseaeq
      121 rrfhatlvrl keagwqiwld dltrelaeaf arlalpldgv kidrsalrer aplapfvqev
      181 rtgiaqsili egiensrdla rartsgaqsg qgflwpesrt darvtf
//
LOCUS       WP_235155194             528 aa            linear   BCT 02-MAR-2025
DEFINITION  STY4199 family HEPN domain-containing protein [Enterobacter
            hormaechei].
ACCESSION   WP_235155194
VERSION     WP_235155194.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 528)
  AUTHORS   Anantharaman,V., Makarova,K.S., Burroughs,A.M., Koonin,E.V. and
            Aravind,L.
  TITLE     Comprehensive analysis of the HEPN superfamily: identification of
            novel roles in intra-genomic conflicts, defense, pathogenesis and
            RNA processing
  JOURNAL   Biol Direct 8, 15 (2013)
   PUBMED   23768067
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037500.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18729.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..528
                     /product="STY4199 family HEPN domain-containing protein"
                     /calculated_mol_wt=60210
     Region          1..281
                     /region_name="HEPN_STY4199"
                     /note="STY4199-like HEPN; pfam18729"
                     /db_xref="CDD:436696"
ORIGIN      
        1 mmissshhtr eqfehclaai rqasveilll lnvhvsegkd prwfleqlds arlglggwga
       61 varklnlnda emtaftlqlr llqqrvpqye sgqdvsenql iaamrfvtsl eylrlqqpll
      121 tyetgrvpek esqlqaqkqv raielmirgl iqqawpdpvr lnnhlktlfn aervrrwlkn
      181 geindvlsgm lfselaqllv dkkefsryya plfnapdmlt llveprktlq tfledirqir
      241 nsitvqqpls gaqiqlldcy ytqitrsvqr afeegrtrvn paalmavdes elhafwekaq
      301 kmdrttggdl fevrdsiekp tqratrtpeq reqlisgvlw gavgvmviai vvggfwlvts
      361 skpqpavast aspapvqemr etpssretlt rmgvtwdenn frsaisrndt rvallflqgg
      421 mdwkmswtee alsagyddvl evmlryrlqm teqkpcrrfi ntlshamang esltpmrkqy
      481 lkafctvpav vkrqqhdadm atrraktqpd astkkwqsiq taiyevir
//
LOCUS       WP_235155214             395 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 88 protein [Enterobacter hormaechei].
ACCESSION   WP_235155214
VERSION     WP_235155214.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 395)
  AUTHORS   Mori,S., Akao,S., Miyake,O., Nankai,H., Hashimoto,W., Mikami,B. and
            Murata,K.
  TITLE     Crystallization and preliminary X-ray analysis of a novel
            unsaturated glucuronyl hydrolase from Bacillus sp. GL1
  JOURNAL   Acta Crystallogr D Biol Crystallogr 59 (Pt 5), 946-949 (2003)
   PUBMED   12777820
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019113.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07470.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..395
                     /product="glycoside hydrolase family 88 protein"
                     /calculated_mol_wt=44806
     Region          56..360
                     /region_name="LanC_like"
                     /note="Cyclases involved in the biosynthesis of
                     lantibiotics, and similar proteins; cl04955"
                     /db_xref="CDD:471159"
ORIGIN      
        1 mssrikeerl pviaapvdsr tfsdelnsar shvldlisrh ltefgdkfpa etcqkgfypl
       61 tdnvewttsf wtgqlwlawe msgeekfram aekhvrsfgl riagrndtnt hdlgflytls
      121 cvaawrltgn reargfslla aeallerfhe kakiiqawgd lsdpeqagrm iidcnmnlpl
      181 lywateqtgd prfadaakah vmqaatylir ddastfhtyy mdvatgapry gntqqgyadd
      241 scwsrgqawg iygfllsyiy tgdetmials krlanyflnr lpedyvchwd lalvgtdalr
      301 dsssaaiavc gllelvkhlp vtdpdreryl ewakgimstl tkhylmgkee kgngllkhsv
      361 yhlasnkgvd ecaswgdyfy vealvrftqs wklyw
//
LOCUS       WP_235155330             529 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Enterobacter hormaechei].
ACCESSION   WP_235155330
VERSION     WP_235155330.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 529)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..529
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=57946
     Region          21..529
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(314..315,318..319,322,325..326,328..329,332,
                     335..336,339,342..343,346..347,350,353..354,356..357,361,
                     363..364,367,370..371,374..375,378,381,384..385,388,392,
                     395,402,406,409,412..413,416,419..420,423..424,426..427,
                     430..431,444..445,448,451..452,455,458..459,461..462,
                     465..466,469,472..473,476,479..480,482..483,486..487,
                     489..490,493,496..497,500,503)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            384..417
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 mnltqifsrl aprfiprqfg lltgifciig lfsalqlsss flltaslnea qrneqrnqla
       61 wqqqsrldqa risllaasdl lnrsgvyfmq dketgsegsw hslmdeaqks laaskqawqa
      121 wlalnppqde glvnsyqlff gaiseqaegl vktnsidlff avpaqafqtd fndnfaryqq
      181 rsekqaiqgr qslmeqlsgl qrlflfaplv llaiaiavwf gmakwvispl rrliihinql
      241 aagdlsgtpp dvvrfnreis qlcgsitamq lglqqlvtqv seattamven igslaqgnqk
      301 lhqqstrqak eleevtahia dlethvegnt gyaklarsra dearqaavgg eqmmtavngs
      361 mqtivdrsse mrgivamids vafqtnilal naaieaahag eqgrgfavva revgllarks
      421 shstqtiqal inhslqgiee gsqvvnrlee nlqqvtglva nlssllndis latlnqgdsi
      481 hqmtrqlqal nqvsrqtdvl vseasnaser lhqqsdlllq avsrfrlpa
//
LOCUS       WP_235155313             724 aa            linear   BCT 02-MAR-2025
DEFINITION  virulence factor SrfC family protein [Enterobacter hormaechei].
ACCESSION   WP_235155313
VERSION     WP_235155313.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 724)
  AUTHORS   Sun,Y., Zhang,G., Hou,X., Xiao,S., Yang,X., Xie,Y., Huang,X.,
            Wang,F., Mo,X., Ding,X., Xia,L. and Hu,S.
  TITLE     SrfABC Toxin from Xenorhabdus stockiae Induces Cytotoxicity and
            Apoptosis in HeLa Cells
  JOURNAL   Toxins (Basel) 11 (12), 685 (2019)
   PUBMED   31766712
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021642.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10139.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..724
                     /product="virulence factor SrfC family protein"
                     /calculated_mol_wt=80244
     Region          12..723
                     /region_name="Virul_Fac"
                     /note="Putative bacterial virulence factor; cl19867"
                     /db_xref="CDD:473239"
ORIGIN      
        1 mtattattqa ligwinetrq hapmldnead allarlngvs areealdral vsqgsiglyg
       61 hsqaakahlq aalcdsgder lnvtpgqrtf dyfshinpgh aptnmavrfs rasrevadda
      121 fplrlrlvte aelvqlfiar ttldpqirav dksviearle kwralrqpqs vpgmtareva
      181 tiarfwqsvv pgakqhidda lwhqfallvp sldlstrasv wsllwgeqqe ltqqwlkfaq
      241 vlhqtshasa laaplsllvd sfglpcegfl thgaftvpea qetllhpvkn gellnaislp
      301 vdvlasltre vvlpvencvl dnvdvidipa ipeentplmm qakclwlleh yrqhiqpdvl
      361 vicnatahhq qtaktarllq nwvketqpve esalpglvwa itphdarftt kqnldeavqq
      421 llgqpglrwg tlqaldshsm qrviewlsqa tlpaqrqkrl ralkrllqes lstlmrpyva
      481 pltqepgagr amaekmvrtl qgsaarhgel legllpplna fetlltvhqp reeqvnglfn
      541 dvidlfaeet qenpgalqtk dkarlahnvw vnhlrqwsrn daaaarlgld aevlqqiadv
      601 livtsyrldl plqlqriaek dkssaaqlha atgnfiswlg yeltpvserp asrirkgepi
      661 fvtpvvssas prltrlgeqp vhaatayvyd wlvalytrai envdyqcpyd vqpaarkals
      721 alls
//
LOCUS       WP_235155304             510 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Enterobacter hormaechei].
ACCESSION   WP_235155304
VERSION     WP_235155304.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 510)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 510)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..510
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=58617
     Region          324..483
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(345,358..359,432,433,454)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:271175"
     Site            order(358,454,457,481)
                     /site_type="active"
                     /db_xref="CDD:271175"
ORIGIN      
        1 mnqirpfipl vqngtmslee fkrkmqgyra atkqdfdnyl lhalerdiae verlpelgqw
       61 hrnihpncll sasdtveaaq gyseahfqrm vngsdqtane vlaslhmkkl elskgdlpfa
      121 nqvgaaldms ratvaqayea fyskdllryr qliatlqnql eeqklksspq srvetnqafs
      181 tevkdtasqa iklseawtqy veekgqkwra sianenqrff dvliyvigdk pidrvtkqdi
      241 realkvtenl ptrtklpykr lslpecidyd vpeedlissq hvekhlkiwr slfktylvet
      301 kdqleksptd gityevkpnr rghfsntels klktklfsle nndwrkwyfl tliytgarrg
      361 eiasirkrdi rldeetsrwy iyiedgkteh aqrqiplnkv lesgllslad alndgdlifs
      421 dlpnyttatv ewgklmkeig ipdydefglk rrihslrhtf vshclasggv slplmqfvvg
      481 hsrtqslgvt siythrpplk dllcvvdfqn
//
LOCUS       WP_235155340              92 aa            linear   BCT 02-MAR-2025
DEFINITION  biofilm development regulator YmgB/AriR family protein
            [Enterobacter hormaechei].
ACCESSION   WP_235155340
VERSION     WP_235155340.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 92)
  AUTHORS   Lee,J., Page,R., Garcia-Contreras,R., Palermino,J.M., Zhang,X.S.,
            Doshi,O., Wood,T.K. and Peti,W.
  TITLE     Structure and function of the Escherichia coli protein YmgB: a
            protein critical for biofilm formation and acid-resistance
  JOURNAL   J Mol Biol 373 (1), 11-26 (2007)
   PUBMED   17765265
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022255.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10798.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..92
                     /product="biofilm development regulator YmgB/AriR family
                     protein"
                     /GO_process="GO:0071468 - cellular response to acidic pH
                     [Evidence IEA]"
                     /calculated_mol_wt=10136
     Region          34..91
                     /region_name="YmgB"
                     /note="Biofilm development protein YmgB/AriR; cl12389"
                     /db_xref="CDD:472312"
ORIGIN      
        1 mskaimqqty nfealhdkgl aehflnagkh lsgevevlgs aircimltgd nlsnkeiilq
       61 lihtleitee peacdvirnt leivvgftrd di
//
LOCUS       WP_235155387             542 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Enterobacter
            hormaechei].
ACCESSION   WP_235155387
VERSION     WP_235155387.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..542
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=60797
     Region          12..542
                     /region_name="PRK15104"
                     /note="oligopeptide ABC transporter substrate-binding
                     protein OppA; Provisional"
                     /db_xref="CDD:185059"
ORIGIN      
        1 mkpqtrthft lslltagilc astatwaakv pagtqladkq elvrnngsep asldphkves
       61 dvefniisdl fdglvsvspa geiqprlaek wenkdntvwt fhlrpgitws dgtpitaedi
      121 vwswqrlvdp ktaspyasyp gsmrivngtd iaegkkapes lgvkaindtt levtltqpna
      181 aflamlahps lvpidkvlvg rfgdkwtkpe hfvssgaykl sqwvvneriv avrnpkywdn
      241 ehtvinkvty lpisseaadv nrykageidi vytvpinqfa qlkktlgsel dvspqlatyy
      301 yefnttrppf ndarvrkaln laldkdiiad kvlgqgqrpa wlisqpdigg vklqnpdyas
      361 wpmdkriaea kkllaeagfn dshplsfnll yntseshqri aiaassmwkk nlgveaklqn
      421 qewktmldtm hthnfdavry awiadyddaa tflnnfrtgd sqnttqysnp dydralvnaa
      481 ksktaeergk fyqqaedllg rdvpaipvyh yvrthlvkpw vegftpdklg yyytkdmyik
      541 kh
//
LOCUS       WP_235154626             159 aa            linear   BCT 02-MAR-2025
DEFINITION  AIDA repeat-containing protein, partial [Escherichia coli].
ACCESSION   WP_235154626
VERSION     WP_235154626.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 159)
  AUTHORS   Selkrig,J., Mosbahi,K., Webb,C.T., Belousoff,M.J., Perry,A.J.,
            Wells,T.J., Morris,F., Leyton,D.L., Totsika,M., Phan,M.D.,
            Celik,N., Kelly,M., Oates,C., Hartland,E.L., Robins-Browne,R.M.,
            Ramarathinam,S.H., Purcell,A.W., Schembri,M.A., Strugnell,R.A.,
            Henderson,I.R., Walker,D. and Lithgow,T.
  TITLE     Discovery of an archetypal protein transport system in bacterial
            outer membranes
  JOURNAL   Nat Struct Mol Biol 19 (5), 506-510,S1 (2012)
   PUBMED   22466966
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 159)
  AUTHORS   Fang,Y., Ngeleka,M., Middleton,D.M. and Simko,E.
  TITLE     Characterization and immuno-detection of AIDA-I adhesin isolated
            from porcine Escherichia coli
  JOURNAL   Vet Microbiol 109 (1-2), 65-73 (2005)
   PUBMED   15950405
REFERENCE   3  (residues 1 to 159)
  AUTHORS   Sherlock,O., Schembri,M.A., Reisner,A. and Klemm,P.
  TITLE     Novel roles for the AIDA adhesin from diarrheagenic Escherichia
            coli: cell aggregation and biofilm formation
  JOURNAL   J Bacteriol 186 (23), 8058-8065 (2004)
   PUBMED   15547278
REFERENCE   4  (residues 1 to 159)
  AUTHORS   Farthing,M.J.
  TITLE     Bugs and the gut: an unstable marriage
  JOURNAL   Best Pract Res Clin Gastroenterol 18 (2), 233-239 (2004)
   PUBMED   15123066
REFERENCE   5  (residues 1 to 159)
  AUTHORS   Benz,I. and Schmidt,M.A.
  TITLE     AIDA-I, the adhesin involved in diffuse adherence of the
            diarrhoeagenic Escherichia coli strain 2787 (O126:H27), is
            synthesized via a precursor molecule
  JOURNAL   Mol Microbiol 6 (11), 1539-1546 (1992)
   PUBMED   1625582
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027494.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16168.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>159
                     /product="AIDA repeat-containing protein"
     Region          26..>159
                     /region_name="PL_Passenger_AT"
                     /note="Pertactin-like passenger domains (virulence
                     factors) of autotransporter proteins of the type V
                     secretion system. Autotransporters are proteins used by
                     Gram-negative bacteria to transport proteins across their
                     outer membranes. The C-terminal (beta) domain...; cl00185"
                     /db_xref="CDD:469645"
ORIGIN      
        1 gtnasgkfsi dgisgqasgl llenggsftv naggqagntt vgyrgtltla aggslsgrtq
       61 lskgasmvln gdvvstgdiv nageirfdnq ttpdaalsra vakgaspvtf hklttsnltg
      121 qggtinmrvr ldgsnasdql vinggqatgk twlaftnvg
//
LOCUS       WP_235155457             202 aa            linear   BCT 02-MAR-2025
DEFINITION  fimbrial protein [Enterobacter hormaechei].
ACCESSION   WP_235155457
VERSION     WP_235155457.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012635.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00419.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..202
                     /product="fimbrial protein"
                     /GO_component="GO:0009289 - pilus [Evidence IEA]"
                     /GO_process="GO:0007155 - cell adhesion [Evidence IEA]"
                     /calculated_mol_wt=20772
     Region          1..202
                     /region_name="Fimbrial"
                     /note="Fimbrial protein; cl01416"
                     /db_xref="CDD:445401"
ORIGIN      
        1 miskkyglsi alasvlaags avaadsdtgt itfhgmvsnn tcqvsldqki dqngndfdvt
       61 ldtvfvrgfs talgttstlg ekkfslsltg cdtetakkas aqfsswagss steggllvpp
      121 snaqgsaknv nlvlsndgns atdqikidqt nntqkatida tsgagnlyyr vaytqgqgwn
      181 atsnpvsagt vqaqvaftmi ye
//
LOCUS       WP_235155568             381 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3383 family protein [Escherichia coli].
ACCESSION   WP_235155568
VERSION     WP_235155568.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023291.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11863.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..381
                     /product="DUF3383 family protein"
                     /calculated_mol_wt=41229
     Region          7..379
                     /region_name="DUF3383"
                     /note="Protein of unknown function (DUF3383); pfam11863"
                     /db_xref="CDD:432140"
ORIGIN      
        1 maqglpvsnv vnvdvimspr aasgrnfgal lilgpstiip vserirrysa aedigkdfgv
       61 espeykaaqv ffsqspkpqe vfvgrwvktk gdseqatpet leqavnamld ytswyglgia
      121 ddedipdadw lkvaaeiess svsrilaitt gdekclqtas sddlasklkt agysrsfiqy
      181 ssgnkyaals afgraftvnf ngsntaitlk fkqepgvgye tltvsqasal dakncnvfvy
      241 yqndtailqq gvmangdffd erhgldwlqn yvqtnlynll ytsttkvpqt eagitrllsn
      301 veksldqavq ngliapgvwn ggdlgqlssg dtlpkgyyvy aqpldeqaqs erearkapvi
      361 qaaiklagav hyadvlinvv r
//
LOCUS       WP_235155645              70 aa            linear   BCT 02-MAR-2025
DEFINITION  lysis system i-spanin subunit Rz, partial [Escherichia coli].
ACCESSION   WP_235155645
VERSION     WP_235155645.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 70)
  AUTHORS   Zhang,N. and Young,R.
  TITLE     Complementation and characterization of the nested Rz and Rz1
            reading frames in the genome of bacteriophage lambda
  JOURNAL   Mol Gen Genet 262 (4-5), 659-667 (1999)
   PUBMED   10628848
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015218.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03245.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..70
                     /product="lysis system i-spanin subunit Rz"
                     /GO_process="GO:0019835 - cytolysis [Evidence IEA]"
                     /GO_process="GO:0044659 - viral release from host cell by
                     cytolysis [Evidence IEA]"
     Region          <1..69
                     /region_name="Phage_lysis"
                     /note="Bacteriophage Rz lysis protein; cl22701"
                     /db_xref="CDD:451417"
ORIGIN      
        1 vaagrkrlri natcpgsvre apttsgvgnd asvelspvag rnvlgirdgi isdqaalrtl
       61 qeyirtqcln
//
LOCUS       WP_235155708             642 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase family 39 protein [Pseudomonas viridiflava].
ACCESSION   WP_235155708
VERSION     WP_235155708.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas viridiflava
  ORGANISM  Pseudomonas viridiflava
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024629.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13231.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Pseudomonas viridiflava"
                     /db_xref="taxon:33069"
     Protein         1..642
                     /product="glycosyltransferase family 39 protein"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=70815
ORIGIN      
        1 mhkrtqhlmh awgweksvfn nthvekpddq vviryqllla vfyflivafw svgitfhgap
       61 deathfflle ymktfhtlpg atepsqlfvg pisgwpwhpg afwyhglpfp hvlgalvtsy
      121 sfgwllpddl gylavrsfnw llgavfical friahrsgmq kksaafvall ialipqvsfv
      181 fsyfnsdayg ltsialalsa llgfskapsk ltaiylgaal gllllaklyf lpalvfvaim
      241 ffayqhlgnr kptdylatvg vvalivaapm llvtylkfge vtgisgqlkf vamhksnlgl
      301 gfgtcyigca dhffntdtlw pwlslatksy fsvtgwmdty lpppyymgaa llfiifviga
      361 vvqtirlytp ddkkqfllnh llplvmilgl fpsivffsil gsqnslpqpq grylfvtvpf
      421 lalliaiatt ryanvqnsas varvaksnrf hlkflfivti wmvwtnmlaw slntlhptni
      481 qrstlgrpvv ealqdspafg alggvtlnaq qlakllfinq gefllkapln tpiatgnidi
      541 lrptkdgwli ggwtfieqtd glpqyvvave agkvvgavkv drkrpdvaaa lankkalksg
      601 yegsivasss pekcdlklyt ltsnfkifam adacepisrs sh
//
LOCUS       WP_235155834             171 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Escherichia coli].
ACCESSION   WP_235155834
VERSION     WP_235155834.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025107.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13730.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..171
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=19548
ORIGIN      
        1 mintnviltr eqksaiaeal dvslddleel rikasnkrkt sfkddfsmif ktnigtlakm
       61 kltptsfrii iylfsiidyg nilvnfsqsr vakdlglqks nvsrafkelf ekkilirnae
      121 ddhvylnsnl cvkgiphkfn eeqmgkfkss kaetedfdns fsfysvrkkq s
//
LOCUS       WP_235155855             110 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2645 family protein [Escherichia coli].
ACCESSION   WP_235155855
VERSION     WP_235155855.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10840.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..110
                     /product="DUF2645 family protein"
                     /calculated_mol_wt=13143
ORIGIN      
        1 mlkkqllsif eallyimlty wlidsffafn kydwmlesgd nicsipsvsg edrilqamia
       61 afflltplii lilrklfmre mfefwlyvfs lviclscgww lfwgrfifcy
//
LOCUS       WP_235156169             153 aa            linear   BCT 02-MAR-2025
DEFINITION  replication protein P [Escherichia coli].
ACCESSION   WP_235156169
VERSION     WP_235156169.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Mallory,J.B., Alfano,C. and McMacken,R.
  TITLE     Host virus interactions in the initiation of bacteriophage lambda
            DNA replication. Recruitment of Escherichia coli DnaB helicase by
            lambda P replication protein
  JOURNAL   J Biol Chem 265 (22), 13297-13307 (1990)
   PUBMED   2165499
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018671.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06992.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..153
                     /product="replication protein P"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /calculated_mol_wt=17651
     Region          <14..120
                     /region_name="Phage_lambda_P"
                     /note="Replication protein P; pfam06992"
                     /db_xref="CDD:462061"
ORIGIN      
        1 mteqqirlvc rqcmdrcrag etwppdlaef valisesgan pfgltvdavm eeyrrwrnes
       61 wrydgsdkyp wsqpvlyhic lemrskgier qmtegelkrl aerqlakwak hvgdgfsipp
      121 vrrqlaaper psgptpiell kqeyerrkaa gfv
//
LOCUS       WP_235155439             113 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: TA system toxin CbtA family protein
            [Enterobacteriaceae].
ACCESSION   WP_235155439
VERSION     WP_235155439.1
KEYWORDS    RefSeq.
SOURCE      Enterobacteriaceae (enterobacteria)
  ORGANISM  Enterobacteriaceae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales.
REFERENCE   1  (residues 1 to 113)
  AUTHORS   Tan,Q., Awano,N. and Inouye,M.
  TITLE     YeeV is an Escherichia coli toxin that inhibits cell division by
            targeting the cytoskeleton proteins, FtsZ and MreB
  JOURNAL   Mol Microbiol 79 (1), 109-118 (2011)
   PUBMED   21166897
REFERENCE   2  (residues 1 to 113)
  AUTHORS   Brown,J.M. and Shaw,K.J.
  TITLE     A novel family of Escherichia coli toxin-antitoxin gene pairs
  JOURNAL   J Bacteriol 185 (22), 6600-6608 (2003)
   PUBMED   14594833
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018465.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06755.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Enterobacteriaceae"
                     /db_xref="taxon:543"
     Protein         1..113
                     /product="TA system toxin CbtA family protein"
                     /calculated_mol_wt=12628
     Region          1..107
                     /region_name="CbtA_toxin"
                     /note="CbtA_toxin of type IV toxin-antitoxin system;
                     pfam06755"
                     /db_xref="CDD:369065"
ORIGIN      
        1 mktlpatisq aakpclspva vwqmllirll eqhygltlnd tpfsdetvik ehidagisla
       61 navnflveky elvridrrgf nrqeqspyll avdilrarqa igllrqnhpp sip
//
LOCUS       WP_235155258              92 aa            linear   BCT 02-MAR-2025
DEFINITION  ArsC/Spx/MgsR family protein [Enterobacter hormaechei].
ACCESSION   WP_235155258
VERSION     WP_235155258.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 92)
  AUTHORS   Rochat,T., Nicolas,P., Delumeau,O., Rabatinova,A., Korelusova,J.,
            Leduc,A., Bessieres,P., Dervyn,E., Krasny,L. and Noirot,P.
  TITLE     Genome-wide identification of genes directly regulated by the
            pleiotropic transcription factor Spx in Bacillus subtilis
  JOURNAL   Nucleic Acids Res 40 (19), 9571-9583 (2012)
   PUBMED   22904090
REFERENCE   2  (residues 1 to 92)
  AUTHORS   Reder,A., Hoper,D., Weinberg,C., Gerth,U., Fraunholz,M. and
            Hecker,M.
  TITLE     The Spx paralogue MgsR (YqgZ) controls a subregulon within the
            general stress response of Bacillus subtilis
  JOURNAL   Mol Microbiol 69 (5), 1104-1120 (2008)
   PUBMED   18643936
REFERENCE   3  (residues 1 to 92)
  AUTHORS   Martin,P., DeMel,S., Shi,J., Gladysheva,T., Gatti,D.L., Rosen,B.P.
            and Edwards,B.F.
  TITLE     Insights into the structure, solvation, and mechanism of ArsC
            arsenate reductase, a novel arsenic detoxification enzyme
  JOURNAL   Structure 9 (11), 1071-1081 (2001)
   PUBMED   11709171
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015893.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03960.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..92
                     /product="ArsC/Spx/MgsR family protein"
                     /calculated_mol_wt=10303
     Region          5..91
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 mtdavkiyhn prcsksretl nllkmlnmgs ardlmrqked lykslnlndt sltedrliqa
       61 mvdnpklier pivvangkar igrppedvlg iv
//
LOCUS       WP_235156283             183 aa            linear   BCT 02-MAR-2025
DEFINITION  toxin YdaT family protein [Enterobacter hormaechei].
ACCESSION   WP_235156283
VERSION     WP_235156283.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 183)
  AUTHORS   Bindal,G., Krishnamurthi,R., Seshasayee,A.S.N. and Rath,D.
  TITLE     CRISPR-Cas-Mediated Gene Silencing Reveals RacR To Be a Negative
            Regulator of YdaS and YdaT Toxins in Escherichia coli K-12
  JOURNAL   mSphere 2 (6), e00483-17 (2017)
   PUBMED   29205229
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 183)
  AUTHORS   Yamaguchi,Y. and Inouye,M.
  TITLE     Regulation of growth and death in Escherichia coli by
            toxin-antitoxin systems
  JOURNAL   Nat Rev Microbiol 9 (11), 779-790 (2011)
   PUBMED   21927020
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018013.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06254.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..183
                     /product="toxin YdaT family protein"
                     /calculated_mol_wt=20440
     Region          80..158
                     /region_name="YdaT_toxin"
                     /note="Putative bacterial toxin ydaT; pfam06254"
                     /db_xref="CDD:368819"
ORIGIN      
        1 mqtvsfqqss rassnpmifp chqsesaaqd idhrdicsav rawaaaegrv avalqiqdaa
       61 eelqldgvdf sgqadvwnvk lfrwldnked sasyrknveq lvpaimsvlp iryrdrvvkn
      121 dsfayrmarl ekevseakqa lmldapkkek lkelgegife mfrvdpdlta plmamvttml
      181 gam
//
LOCUS       WP_235156370             986 aa            linear   BCT 02-MAR-2025
DEFINITION  prophage tail fiber N-terminal domain-containing protein
            [Escherichia coli].
ACCESSION   WP_235156370
VERSION     WP_235156370.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019996.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08400.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..986
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..986
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
                     /calculated_mol_wt=98522
     Region          1..124
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
     Region          <439..536
                     /region_name="COG5301"
                     /note="Phage-related tail fiber protein [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:444101"
     Region          <548..625
                     /region_name="COG5301"
                     /note="Phage-related tail fiber protein [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:444101"
     Region          550..587
                     /region_name="Phage_fiber_2"
                     /note="Phage tail fibre repeat; pfam03406"
                     /db_xref="CDD:427282"
     Region          761..808
                     /region_name="Collar"
                     /note="Phage Tail Collar Domain; pfam07484"
                     /db_xref="CDD:429485"
ORIGIN      
        1 mavkisgvlk dgtgkpvqnc tiqlkakrns ttvvvntlas enpdeagrys mdveygqysv
       61 illvegfpps hagtitvyed srpgtlndfl gamteddarp ealrrfelmv eevtrnasav
      121 aqntaaakks asdagtsare aathatdavg saraastsag qaatsaqeas ssagtastka
      181 teasksaaaa essksaaats agaaktsetn aaasqksaat sastattkas eaatsardaa
      241 askeaaksse tnastsassa assataagns vkaaktsetn arssetaaeq sasaaadset
      301 aaassareas ikaeeaavsa taagksaesa assastattk ageateqasa aarsasaakt
      361 setnakaset saessktaaa ssassaassa ssasaskdea trqasaargs attastkate
      421 aagsaaaaaq skstaesaat raetaakrae diasavaled asttkkgivq lssatnstse
      481 sqaatpkavk aaydlangky taqdattaqk givqlssatn stsesqaatp kavkaaydla
      541 ngkytaqdat taqkgivqls satnstsetl aatpkavkaa ndnangrvps arkvngkals
      601 aditltpkdi gtlnsttmsf sggagwfkla tvtmpqassv vsitliggag fnvgspqqag
      661 iselvlragn gnpkgitgal wqrtstgftn fawvntsgdt ydiyvaigny atgvniqwdy
      721 tsnasvtiht spaysankpe gltdgtvysl ytpseqfypp gapipwpsdt vpsgyalmqg
      781 qtfdksaypk laaaypsgvi pdmrgwtikg kpasgravls qeqdgiksht hsasasstdl
      841 gtkttssfdy gtkstnntga hthslsgstn aagnhshrdg rrfnpsvfkd tyqygytssg
      901 qntwgvqgsv gmstgwlant stdgnhshsl sgtaasagah ahtvgigaht hsvaigshgh
      961 titvnaagna entvkniafn yivrla
//
LOCUS       WP_235156418             378 aa            linear   BCT 02-MAR-2025
DEFINITION  porin [Escherichia coli].
ACCESSION   WP_235156418
VERSION     WP_235156418.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024996.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13609.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..378
                     /product="porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=42016
     Region          20..378
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
     Site            order(32,34,40,42..44,64..68,74,76..78,80,82..85,96..97,
                     99..103,113..115,148,150..151,338..339,342,374,376,378)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:238208"
     Site            order(39,59,97,128,148)
                     /site_type="active"
                     /note="eyelet of channel [active]"
                     /db_xref="CDD:238208"
ORIGIN      
        1 mrklsmivcs vvsalmlcea tqaaeiynkd gnkldfygrv karhyisdgs mdgdrtfarl
       61 gfkgetqine sltgfgqwey qflgfktese vrndknrlaf agirhnilgs ldygrnygva
      121 ydvgaltdvl pdfggdswty sdnymtgrtt gvltwrntdf fglvdgltfs aqyqgkndrd
      181 nlleangdgy gfsvsydyeg fgivaaytna drtslqekeg rkrfmtskds egkevitprw
      241 iaggkhaefa gvgvkyndnd lylaadyset rnmtpfgsag iadkarniev vaqymfdfgl
      301 rpslayvqsr gmdvkggivn ygdqslveyi dvganyflnk nmsllidyki nlideseftq
      361 kagvatdnii avgmmyqf
//
LOCUS       WP_235156488             410 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC-three component system protein [Escherichia coli].
ACCESSION   WP_235156488
VERSION     WP_235156488.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 410)
  AUTHORS   Krishnan,A., Burroughs,A.M., Iyer,L.M. and Aravind,L.
  TITLE     Comprehensive classification of ABC ATPases and their functional
            radiation in nucleoprotein dynamics and biological conflict systems
  JOURNAL   Nucleic Acids Res 48 (18), 10045-10075 (2020)
   PUBMED   32894288
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042655.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20276.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..410
                     /product="ABC-three component system protein"
                     /calculated_mol_wt=47127
     Region          119..356
                     /region_name="CTD1"
                     /note="C-terminal domain 1 of the ABC-three component
                     (ABC-3C) systems; pfam20276"
                     /db_xref="CDD:466426"
ORIGIN      
        1 msqedddkyp asavsswsgf vyqgkialyh slkiihdgdl dfelqldssd dfaiykngkl
       61 htahqvkaki skyrsgytka leqstliehd kikgttryfh vsvplsntdd hrgasgevvk
      121 fyrygnnyyc glgeiegltk eliknicikq hiivsdnlin ynycllseki stkaihnhkl
      181 nqvggisenr aayegrikar niledllten pyqnrdyytv alkarlqthl eerldqalpt
      241 msdatyerar clcehiretp inelkalcqm ikpserfqdv qtndirrytk liqaisvepi
      301 fnhlphylds enrfyvptal dvdeseecef dmtreiknng dllrllfeyn hliaskaeas
      361 ftfntkftns ddfddkqtte kfesnitksl cisvitkdda ekrlndkath
//
LOCUS       WP_235156547            1063 aa            linear   BCT 02-MAR-2025
DEFINITION  S6 family peptidase, partial [Escherichia coli].
ACCESSION   WP_235156547
VERSION     WP_235156547.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 1063)
  AUTHORS   Maldonado-Contreras,A., Birtley,J.R., Boll,E., Zhao,Y., Mumy,K.L.,
            Toscano,J., Ayehunie,S., Reinecker,H.C., Stern,L.J. and
            McCormick,B.A.
  TITLE     Shigella depends on SepA to destabilize the intestinal epithelial
            integrity via cofilin activation
  JOURNAL   Gut Microbes 8 (6), 544-560 (2017)
   PUBMED   28598765
REFERENCE   2  (residues 1 to 1063)
  AUTHORS   Johnson,T.A., Qiu,J., Plaut,A.G. and Holyoak,T.
  TITLE     Active-site gating regulates substrate selectivity in a
            chymotrypsin-like serine protease the structure of haemophilus
            influenzae immunoglobulin A1 protease
  JOURNAL   J Mol Biol 389 (3), 559-574 (2009)
   PUBMED   19393662
REFERENCE   3  (residues 1 to 1063)
  AUTHORS   Henderson,I.R., Czeczulin,J., Eslava,C., Noriega,F. and Nataro,J.P.
  TITLE     Characterization of pic, a secreted protease of Shigella flexneri
            and enteroaggregative Escherichia coli
  JOURNAL   Infect Immun 67 (11), 5587-5596 (1999)
   PUBMED   10531204
REFERENCE   4  (residues 1 to 1063)
  AUTHORS   Benjelloun-Touimi,Z., Si Tahar,M., Montecucco,C., Sansonetti,P.J.
            and Parsot,C.
  TITLE     SepA, the 110 kDa protein secreted by Shigella flexneri: two-domain
            structure and proteolytic activity
  JOURNAL   Microbiology (Reading) 144 (Pt 7), 1815-1822 (1998)
   PUBMED   9695914
REFERENCE   5  (residues 1 to 1063)
  AUTHORS   Stein,M., Kenny,B., Stein,M.A. and Finlay,B.B.
  TITLE     Characterization of EspC, a 110-kilodalton protein secreted by
            enteropathogenic Escherichia coli which is homologous to members of
            the immunoglobulin A protease-like family of secreted proteins
  JOURNAL   J Bacteriol 178 (22), 6546-6554 (1996)
   PUBMED   8932311
REFERENCE   6  (residues 1 to 1063)
  AUTHORS   Bachovchin,W.W., Plaut,A.G., Flentke,G.R., Lynch,M. and
            Kettner,C.A.
  TITLE     Inhibition of IgA1 proteinases from Neisseria gonorrhoeae and
            Hemophilus influenzae by peptide prolyl boronic acids
  JOURNAL   J Biol Chem 265 (7), 3738-3743 (1990)
   PUBMED   2105953
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014452.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02395.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>1063
                     /product="S6 family peptidase"
                     /GO_function="GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          1..48
                     /region_name="ESPR"
                     /note="Extended Signal Peptide of Type V secretion system;
                     pfam13018"
                     /db_xref="CDD:463773"
     Region          68..668
                     /region_name="Peptidase_S6"
                     /note="Immunoglobulin A1 protease; pfam02395"
                     /db_xref="CDD:396804"
     Region          753..999
                     /region_name="PL1_Passenger_AT"
                     /note="Pertactin-like passenger domains (virulence
                     factors), C-terminal, subgroup 1, of autotransporter
                     proteins of the type V secretion system of Gram-negative
                     bacteria. This subgroup includes the passenger domains of
                     Neisseria and Haemophilus IgA1 proteases; cd01343"
                     /db_xref="CDD:238653"
ORIGIN      
        1 mnkiyslkys hitggliavs elsgrvssrt tgkkkhkril alcflgllps sysfasqmdi
       61 snfyirdymd faqnkgifqa gatnieivkk dgstlklpev pfpdfspvan kgsttsigga
      121 ysitathntk nhhsvatqnw gnstykqtdw ntshpdfavs rldkfvvetr gategadisl
      181 skqqaleryg vnykgekkli afragsgvvs vkkngritpf nevsykpeml ngsfvhiddw
      241 sgwliltnnq fdefnniasq gdsgsalfvy dnqkkkwvva gtvwgiynya ngknhaaysk
      301 wnqttidnlk nkfsykvdms gaqvatieng kltgtgsdtt diknkdlift gggdillkss
      361 fdngagglvf ndkktyrvng ddftfkgagv dtrngstvew nirydnkdnl hkigdgtldv
      421 rktqntnlkt geglvilgae ktfnniyits gdgtvrlnae nalsggeyng iffaknggtl
      481 dlngynqsfn kiaatdsgav itntstkksi lslnntadyi yhgningnld vlqhhetkke
      541 nhrlildggv dttndislrn tqlsmqghat ehaiyrdgaf scslpapmrf lcgsdyvagm
      601 qnteadavkq ngnayktnna vsdlsqpdwe tgtfrfgtlh lensdfsigr nanvigdiqa
      661 sksnitigdt tayidlhagk niigdgfgfr qnivrgnsqg etlftggita edstivikdk
      721 akalfsnyvy llntkatiek gadvttqsgm fstsdisvsg nlsmtgnpdk dnkfepsiyl
      781 ndasylltdd sarlvaknka svvgdihstk sasimfghde sdlsqlsdrt skglalgflg
      841 gfdvsyrgsv napsasatmn ntwwqltgds alktlkstns mvyftdsann kkfhtltvde
      901 latsnsayam rtnlsesdkl evkkhlsgen nillvdflqk ttpekqlnie lvsapkdtnk
      961 nvfkaskqti gfsnvtpvit tqetddkitw sltgyntvan keatrnaaal fsvdykafln
     1021 evnnlnkrmg dlrdingeag awarimsgtg sasggfsdny thv
//
LOCUS       WP_235156548             183 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein, partial [Escherichia coli].
ACCESSION   WP_235156548
VERSION     WP_235156548.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06763.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..183
                     /product="phage tail protein"
     Region          1..183
                     /region_name="Minor_tail_Z"
                     /note="Prophage minor tail protein Z (GPZ); pfam06763"
                     /db_xref="CDD:284235"
ORIGIN      
        1 aienlsrvrk naipaasama inrvattain qsasqvaret kvrrklvker srlkratvrn
       61 pnakiivnrg dlpviklgir mlgcrpdsil kagqhryqra fiqrlnngrw hvmqrlpear
      121 yekgyddkgr kkrnrlpiqv vkipmaaplk qafdenvdri rrerlpkela yalkqqlria
      181 ikr
//
LOCUS       WP_235156549             146 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail length tape measure family protein, partial [Escherichia
            coli].
ACCESSION   WP_235156549
VERSION     WP_235156549.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 146)
  AUTHORS   Pedersen,M., Ostergaard,S., Bresciani,J. and Vogensen,F.K.
  TITLE     Mutational analysis of two structural genes of the temperate
            lactococcal bacteriophage TP901-1 involved in tail length
            determination and baseplate assembly
  JOURNAL   Virology 276 (2), 315-328 (2000)
   PUBMED   11040123
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06791.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>146
                     /product="phage tail length tape measure family protein"
     Region          55..>146
                     /region_name="TMP_2"
                     /note="Prophage tail length tape measure protein;
                     pfam06791"
                     /db_xref="CDD:429120"
ORIGIN      
        1 msqpvgdlvi dlsldavrfd eqmtrvrrhf sgletdarkt ataveqglsr qalaaqkagm
       61 svgqykaamr mlpmqftdva tqlaggqnpw lillqqggqv kdsfggmipm frglagaisl
      121 pmvgvtslav atgalayawy qgdstl
//
LOCUS       WP_235156648            1620 aa            linear   BCT 02-MAR-2025
DEFINITION  zincin-like metallopeptidase toxin domain-containing protein
            [Escherichia coli].
ACCESSION   WP_235156648
VERSION     WP_235156648.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 1620)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026976.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15640.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1620
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..1620
                     /product="zincin-like metallopeptidase toxin
                     domain-containing protein"
                     /calculated_mol_wt=180504
     Region          <252..305
                     /region_name="PAAR_RHS"
                     /note="proline-alanine-alanine-arginine (PAAR) domain,
                     also containing C-terminal Rearrangement hotspot (Rhs)
                     extensions; cd14742"
                     /db_xref="CDD:269827"
     Region          393..465
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
     Region          553..593
                     /region_name="YD_repeat_2x"
                     /note="YD repeat (two copies); TIGR01643"
                     /db_xref="CDD:273728"
     Region          <592..1470
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
     Region          1485..1613
                     /region_name="Tox-MPTase4"
                     /note="Metallopeptidase toxin 4; pfam15640"
                     /db_xref="CDD:406148"
ORIGIN      
        1 msegpggpqg ataggtlamr mlsqqamvas qmkraandka iaqmlaskks gppaarlgde
       61 iqhksflgal agavlgaivt iaegclimaa catgpyalvl vpalmyasyk asdyveekqn
      121 qleswinsfc dtdgaintgs envningkpa araavtlppp pppgaipevp qgepswgdia
      181 tdllesaaek avplakawgn avitltdsna gfmdrvsaga sllfpagpvl mefatmvggr
      241 geikkdvdfp eagedtalcd kenkppriaq gssnvfinnq paarqgdkle csaaivggsp
      301 dvfiggeqvt yldiqpefpp wqrmilggit iasyllppag llgklknlar lgklgnllgk
      361 sgkllgaklg allgktgksl ksiankvirw vtdpvdpvtg aycdertdft lgqtlplsft
      421 rfhssvlplh gltgvgwsds wseyawvreq gnrvdiitqg atlrfafdgd sdtavnpyha
      481 qyilrrrddy lelfdrdals srffydafpg mrlrhpvtdd tsddrlahsp gdrmymlggm
      541 sdtasnritf erdsqyritg vshtdgirlk ltyhasgylk aihrtdngiq tlatyeqdar
      601 grlteadarl dyhlfyeyda adriirwsdn dqtwsrftyd aqgrcvnvtg aegyynatld
      661 ygdgcttvtd gkgihryyyd pdgnilreea pdgstttyew defhhllarh spagrvekfe
      721 ynaahgqlsr ytaadsavwq yryderglls nitdpagqtw tqqcderglp vslvspqgee
      781 trlaytpqgl lsgifrqder rlgieydhhn rpetltdvmg rehhteysgh dlpvkmrgpg
      841 gqsvrlqwqq hhklsgiera gtgaegfryd rhgnllaytd gngvvwtmey gpfdlpvart
      901 dgeghrwqyr ydkdtlqlte vinpqgesyr yildncgrvt eerdwggvvw ryrydadglc
      961 tarvngleet ilysrdaagr laevitpegk tqyaydksgr ltgifspdgt sqrtgyderg
     1021 rvnvttqgrr aieyhypdeh tvircilppe derdrhpdes llkttyryna ageltevilp
     1081 gdetltfsrd eagrevfrhs nrgfaceqgw naasqlvtqr agffpeeatw ggllpslvre
     1141 yrydsagnvs gvtsredygr etrreyrldr ngqvtavtas gtglgygegd esygydscgy
     1201 lkaqsagrhr iseetdqyag ghrlkqagnt qydydaagrm vsrtkhrdgy rpeterfrwd
     1261 srdqltgycs aqgelweyrh dasgrrtekr cdrkkirfty lwdgdsiaei reyrddklys
     1321 vrhlvfngfe lisqqfsrvr qphpsvapqw vtrtnyavsd ltgrplmlfn segktvwrpg
     1381 qtslwglals lpadtdypdp rgeldpeadp gllyagqwqd aesglcynrf ryyepetgmy
     1441 lvsdplgllg geqtyryvpn pcgwvdplgl aasskisslm dyigdgrrvs ghtgfldgvr
     1501 lsrsqinnia kemeklgikv irkadkylpp naraafdygl rniylrknat lyevyhevih
     1561 akqfakigre ayealgrlsr eehvlneilk sknlfneaei ahaikyvegl rekfmmglin
//
LOCUS       WP_235156720             357 aa            linear   BCT 02-MAR-2025
DEFINITION  type I restriction endonuclease [Dyadobacter sp. CY351].
ACCESSION   WP_235156720
VERSION     WP_235156720.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 357)
  AUTHORS   Piekarowicz,A., Klyz,A., Kwiatek,A. and Stein,D.C.
  TITLE     Analysis of type I restriction modification systems in the
            Neisseriaceae: genetic organization and properties of the gene
            products
  JOURNAL   Mol Microbiol 41 (5), 1199-1210 (2001)
   PUBMED   11555298
REFERENCE   2  (residues 1 to 357)
  AUTHORS   Makovets,S., Doronina,V.A. and Murray,N.E.
  TITLE     Regulation of endonuclease activity by proteolysis prevents
            breakage of unmodified bacterial chromosomes by type I restriction
            enzymes
  JOURNAL   Proc Natl Acad Sci U S A 96 (17), 9757-9762 (1999)
   PUBMED   10449767
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016220.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04313.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..357
                     /product="type I restriction endonuclease"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=41607
     Region          1..357
                     /region_name="COG4748"
                     /note="Uncharacterized conserved protein, contains
                     restriction enzyme R protein N terminal (HSDR_N) domain
                     [Function unknown]"
                     /db_xref="CDD:443782"
ORIGIN      
        1 mdfkdqikqf sdrvsklken iyteeatkna fimpflqvlg ydvfnplevv peficdigik
       61 kgekidyaif rdgnpiilve ckhwkqkldv hdgqllryfh vskakfsilt nglifrfytd
      121 lvqpnkmdek pflefnieei kdgqieklke fhkayfdven iyqsasdlky ineirhlvsq
      181 efsepndefv kyfakqvyps vvtskvlesf rslvkrtitn iindtindrl ksaissndtp
      241 iqeeptpgts iaspaqhdke vvttqeeleg fyivrsllrq kvqsnrithr dalsyfaifl
      301 ddnnrkplcr lylnspskky iglfdaekke tkieikslde iynfgkeldd tieiyvk
//
LOCUS       WP_235156723            1018 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 N-terminal domain-containing protein
            [Dyadobacter sp. CY351].
ACCESSION   WP_235156723
VERSION     WP_235156723.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 1018)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00933.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..1018
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=113235
     Region          76..>445
                     /region_name="BglX"
                     /note="Periplasmic beta-glucosidase and related
                     glycosidases [Carbohydrate transport and metabolism];
                     COG1472"
                     /db_xref="CDD:441081"
     Region          606..1012
                     /region_name="AmpC"
                     /note="CubicO group peptidase, beta-lactamase class C
                     family [Defense mechanisms]; COG1680"
                     /db_xref="CDD:441286"
ORIGIN      
        1 mknwllsrfr lvvsvvvlvi ltsmvsvawk rirvftepvt alpetvkqpa kkarkrldpv
       61 lvlpenewvd stlnsltieq kigqlfmvat fsnrdeshyk yidrlisdfh iggliffqgg
      121 pvgqaqltnr yqshsniplf igidgewglg mrldstisfp kqmvlgsiqd delvyrmgsd
      181 iarqcsrlgi qinfapvsdi nsnpgnpvig irsfgedrdn vtrkaiaymk glqhnkiiat
      241 akhfpghgdt dadshftlpv lthsidqlte tdlypyrami adslmgvlng hlfipaldst
      301 pnlasslsek vvtgllrkdl gfrglvftda mnmrgvlktg kaaevnlkal iagndillyp
      361 esiaetvaki kdaidskris ekiiddkvkr ilqakywsgl sqykpidtnn lyadlnteks
      421 kelyrelcea svtvvknnnd llpigsvmdd kmasvsigdg ssvafqkmls tykpmrsytf
      481 yegptsqaqi aemigylsny ntvivdvhgi tsnpksnygv ttgmvdfvnq lklqnkkvil
      541 clfgtpysiq ffpetdalic asqdgkdqqe ivpqiifgal ksqgrlpvsv lsykagsgvt
      601 tttinriafg tpesvgmdgs slkridelat aavndhvfpg cevlvsrkgk iiydkqfgal
      661 syrtpdrvts etiydlaslt kvsatlqavm llydrkqidl dqkastylpe lmgtnkqnft
      721 vrdlllhrsg lvsfypplwd rtktsaggll peyysskadt syylqvapkl fakgamrdsv
      781 wkwvvespmn nrkdrsgsyg ylysdlgflt lqkivekvtg qpldifvsan iyeplglayl
      841 gfnplrrfse kqiapteqdy rfrnqllqgt vhdqmsaivg gvaghaglfg tardlailfq
      901 mnlwkgnyag rryfenatvp lfsrvydesh hrglgwdkap ndgnssyvsp qasvnsfght
      961 gftgtmvwid peedlvfifl snrvnpdpen taittqrtrr kiqdvvyssl ierkselp
//
LOCUS       WP_235156724             235 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Dyadobacter sp.
            CY351].
ACCESSION   WP_235156724
VERSION     WP_235156724.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 235)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 235)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 235)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 235)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..235
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=25968
     Region          1..>220
                     /region_name="GldA_ABC_ATP"
                     /note="gliding motility-associated ABC transporter
                     ATP-binding subunit GldA; TIGR03522"
                     /db_xref="CDD:132561"
ORIGIN      
        1 msiqvtnltk lygtqraidg isfslkkgei vgflgpngag ksttmkiltg ylkasegsak
       61 vsdydvseep mparrtigyl pehnplyldm yvsefllfsg klygmksael rtrvdevial
      121 cgleaekrkk igqlskgyrq rvglaqsflh npsvlildep ttgldpnqiq eirevirnag
      181 kdktvlfsth imqevealcd rviiinkgkv vsdstldelr ktgdsleeif rslth
//
LOCUS       WP_235156815             659 aa            linear   BCT 02-MAR-2025
DEFINITION  sialate O-acetylesterase [Dyadobacter sp. CY351].
ACCESSION   WP_235156815
VERSION     WP_235156815.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 659)
  AUTHORS   Surolia,I., Pirnie,S.P., Chellappa,V., Taylor,K.N., Cariappa,A.,
            Moya,J., Liu,H., Bell,D.W., Driscoll,D.R., Diederichs,S.,
            Haider,K., Netravali,I., Le,S., Elia,R., Dow,E., Lee,A.,
            Freudenberg,J., De Jager,P.L., Chretien,Y., Varki,A.,
            MacDonald,M.E., Gillis,T., Behrens,T.W., Bloch,D., Collier,D.,
            Korzenik,J., Podolsky,D.K., Hafler,D., Murali,M., Sands,B.,
            Stone,J.H., Gregersen,P.K. and Pillai,S.
  TITLE     Functionally defective germline variants of sialic acid
            acetylesterase in autoimmunity
  JOURNAL   Nature 466 (7303), 243-247 (2010)
   PUBMED   20555325
REFERENCE   2  (residues 1 to 659)
  AUTHORS   Bitto,E., Bingman,C.A., McCoy,J.G., Allard,S.T., Wesenberg,G.E. and
            Phillips,G.N. Jr.
  TITLE     The structure at 1.6 Angstroms resolution of the protein product of
            the At4g34215 gene from Arabidopsis thaliana
  JOURNAL   Acta Crystallogr D Biol Crystallogr 61 (Pt 12), 1655-1661 (2005)
   PUBMED   16301800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015585.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03629.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..659
                     /product="sialate O-acetylesterase"
                     /calculated_mol_wt=72289
     Region          <227..324
                     /region_name="SASA"
                     /note="Carbohydrate esterase, sialic acid-specific
                     acetylesterase; pfam03629"
                     /db_xref="CDD:427409"
     Region          581..656
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mlsisangqi iltapannqi vqrnlsgfas iaitayayrp ytsiegrlvp ikgnvhrekv
       61 wdfdeeqvrq gfltasvqae tgwyqlkisa vtengdidsi svdrvgvgev flvagnsnam
      121 glpglgaksa sdqvvsfnav nkqlnaenit vapnepmrkp tfeilkkdnf ifpsgetawy
      181 wgelgdsisk rfktpvlfln aawaaansds yrdaatgkda fnpyvgknwp nrqpysnivn
      241 tirhlnswlg mravlwshge ndaqlkfteq nyfnniqtli tnaradagyn vpwviarnsa
      301 sniikdpylp vinaqkrlst lknfntfpgp nldtiqiprp vsehfenvpg giqgltlaas
      361 awnraltdsl fkkivpiqpt nsihtgvvps talpgasfyl gynihgdhts plslraelfd
      421 eggkfvdtvg igsvnpmlvk lpanlangny sirlagttpn lagststlfy vnnayryvqv
      481 vntisavkmn qvinlkwlva anpgmqrmvl ekttngdiyt dlqqynvpdn gtgsgvyaft
      541 dtntdskiif yrvrmeytdg rtsyspvvti lepgalprlv afpnpvtrqa fyletddidp
      601 ipqlslydvg grahplfvsd reiigllavr tlyplpagiy ilhiksgtgt hvqrmvfvd
//
LOCUS       WP_235156857             626 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase [Dyadobacter sp. CY351].
ACCESSION   WP_235156857
VERSION     WP_235156857.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 626)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..626
                     /product="PfkB family carbohydrate kinase"
                     /calculated_mol_wt=69518
     Region          2..314
                     /region_name="RfaE"
                     /note="ADP-heptose synthase, bifunctional sugar
                     kinase/adenylyltransferase [Cell wall/membrane/envelope
                     biogenesis]; COG2870"
                     /db_xref="CDD:442117"
     Region          357..613
                     /region_name="Gph"
                     /note="Phosphoglycolate phosphatase, HAD superfamily
                     [Energy production and conversion]; COG0546"
                     /db_xref="CDD:440312"
ORIGIN      
        1 mkiavygdfc ldsywimder gsevsietgl qaqavtrhyy tpggaanvva nlsalkpagi
       61 rvigtigndm qgrelrsqle nlgaettalf iqkehfntys ylkriidgke epridfgvyn
      121 ersdetdqkl laaieqalqe sdalifnqqv tgsinnehfi dqanalfary sdkivmldsr
      181 hfndrfenty lkcndreias lngelvnpgd nvpitevkky gravyekykk pvfvtcgerg
      241 iiafdqtgar evhgiqlksk ldtvgagdta isaitlclaa gfpsveaatf gnfaaavtvq
      301 klyttgtana reilsvsqdp dfiynadlae nersavflqd tevelcepgv leklgqirya
      361 vfdhdgtiss lrqgweeime pvmmkailgd hyntidanaf hkvlgqvkef ihkttgiqti
      421 yqmeglvnlv reagyvpeqd ildkfqykal yndglmemvi krmeklaage lgqedytmkg
      481 avaflqelke rgvtmylasg tdaedvkhea emlgyahlfd ggiygalkdy tkfskkmiie
      541 kiikdnnlng nelavfgdgp deiregrrag giavgitsne vqrfghnpak rprlvkagah
      601 llipdfsqyk klitllfqen vkyada
//
LOCUS       WP_235156864             868 aa            linear   BCT 02-MAR-2025
DEFINITION  family 20 glycosylhydrolase [Dyadobacter sp. CY351].
ACCESSION   WP_235156864
VERSION     WP_235156864.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 868)
  AUTHORS   Tews,I., Perrakis,A., Oppenheim,A., Dauter,Z., Wilson,K.S. and
            Vorgias,C.E.
  TITLE     Bacterial chitobiase structure provides insight into catalytic
            mechanism and the basis of Tay-Sachs disease
  JOURNAL   Nat Struct Biol 3 (7), 638-648 (1996)
   PUBMED   8673609
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012931.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00728.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..868
                     /product="family 20 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=97261
     Region          32..182
                     /region_name="CHB_HEX"
                     /note="Putative carbohydrate binding domain; cl03918"
                     /db_xref="CDD:446232"
     Region          195..853
                     /region_name="Chb"
                     /note="N-acetyl-beta-hexosaminidase [Carbohydrate
                     transport and metabolism]; COG3525"
                     /db_xref="CDD:442747"
ORIGIN      
        1 mkriflyqlv alcflvlagc srngdvtkeq aqkigiswkl itnfiepahs fdakftlrng
       61 sdftldgtnw alffnmsprp iqrnktpqpa iiehlngdwy kmvpgkdfkl apgdsiivny
      121 tgtegviket dapmglyfvf ydkegkekei vqvadfkvep fvakeqilrg kddlvplpta
      181 eqrykdnlkf tklgaeqllk iipspvkmsa gtetftldsk anvfyqkgle keakyliekl
      241 ktvtgtdfpi reglptttta eapsivlntg tvsvngiake ayklgvnasg vnitgsdaag
      301 vfygiqsllq lvptesyqkp apsillghiq vedaprfhfr smhldvgrnf qtkesikrvl
      361 dllasykvnh flfyttedeg wrveidglpe ltdvgahrah msgigapalh psygsgpvan
      421 degkygsgyy tradfieilk yandrhikvi pevnfpghal aaiksmeary erlmkegkek
      481 eaneyrlidp edksvylsaq ayknntvsva restyhffek vvdefakmyk eagltmdtfh
      541 tggdevaega wtkspmaikl kaenpeikef rdlqtyffrk llprlekrnl kvhgweeval
      601 tktnagiyna npefvghpvv pyvwnnvydv dlgnrlanag yqvvlcnvtn fyfdmsynnd
      661 pkepglywgg fvdtrdnwaf apfnmfrtte qtalgkpmke efvgkqqlkp earkniigie
      721 aqlwcetvkg rdmmeysilp klmgfaesaw aaerkwenva ddaarkkmid egwnvfansi
      781 aqrhmprmrf vnggynyrlp mpgavveggm lkanvelpgl airyttdgse ptakspvyea
      841 pvkasgtikl ksfdmagras rtsvvaaq
//
LOCUS       WP_235157120             942 aa            linear   BCT 02-MAR-2025
DEFINITION  triple tyrosine motif-containing protein [Dyadobacter sp. CY351].
ACCESSION   WP_235157120
VERSION     WP_235157120.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019136.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07495.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..942
                     /product="triple tyrosine motif-containing protein"
                     /calculated_mol_wt=108194
     Region          5..882
                     /region_name="COG3292"
                     /note="Periplasmic ligand-binding sensor domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:442521"
     Region          882..938
                     /region_name="HTH_CRP"
                     /note="helix_turn_helix, cAMP Regulatory protein
                     C-terminus; DNA binding domain of prokaryotic regulatory
                     proteins belonging to the catabolite activator protein
                     family; cl46859"
                     /db_xref="CDD:481199"
ORIGIN      
        1 mwkalllffa iifaakaqet pplinyssai ykahnqnwai dqtsdqiiya ansdglmeyd
       61 gaawklyplp drqivrtvlc detvpntlmg kvfnqnspke qriyvggfse fgywkkefdg
      121 qlkyhslsks anfaslktee iwhitktpth iyfqsfsriy rydgqnitel stpgnfmflr
      181 fvqnrlflpt igkgiyelkg kkfeklagte plsavivsai lpfsngqili ttfkhglffw
      241 kdgllspwki pfseelktni inravmlrqd sslvfgtiqs gvyviekngk lkyhfnketg
      301 lqnntvlalt edrrnqlwig ldqgidmlkm sspvisyqtn dnplgstyaa aiwrgklyvg
      361 snkgvfvkkw lstepfqpvp glegqtwnlq vfddqllcgh ndatyrineq gitklsnitg
      421 gwvmlpiqsg qetlllqgsy nglhvykkns sqqwayaypi kgispipvkq ivrdekgafw
      481 lghayrglfm akltpaldsa yqckefkapa dlpgefavei mkwrkrlyvr sgsvflqpda
      541 ndklqvstdf aqhsedeafk irtgvngdwf kvfinrityy asdnqvhnlp lalirnseti
      601 ipvskdyyff cldngyalyn rtsgaknvep paspivrkva nlrnlsqsfs ilgkpalpsn
      661 vrslrinfal pvygqstqyk yrlrglsdqw sewtdqnfve ftnlestryt fevksnlndr
      721 vtayqfsvqp ywretliaki vfitliglvf vglilyqeer lrrhrnrlmr eqeeklrqqq
      781 lanerqimqi qneklqsdiq gksqqlsnia invvrkneil eeirdelkqv kaemgqqlpn
      841 ihyqkllnsi ernvagkddw mlfeqnfdev heqffkrlrq iaptispsel rlaaclrmnl
      901 stkemapvlg isirgveikr yrlrkklglg tdgnlvqfmm di
//
LOCUS       WP_235157134             440 aa            linear   BCT 02-MAR-2025
DEFINITION  putative glycoside hydrolase [Rhodococcus ruber].
ACCESSION   WP_235157134
VERSION     WP_235157134.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus ruber
  ORGANISM  Rhodococcus ruber
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 440)
  AUTHORS   Naumov,D.G.
  TITLE     [GHL1-GHL15: new families of hypothetical glycoside hydrolases]
  JOURNAL   Mol Biol (Mosk) 45 (6), 1073-1083 (2011)
   PUBMED   22295578
REFERENCE   2  (residues 1 to 440)
  AUTHORS   Naumov,D.G. and Stepushchenko,O.O.
  TITLE     [Endo-alpha-1-4-polygalactosaminidases and their homologues:
            structure and evolution]
  JOURNAL   Mol Biol (Mosk) 45 (4), 703-714 (2011)
   PUBMED   21954604
REFERENCE   3  (residues 1 to 440)
  AUTHORS   Naumoff,D.G.
  TITLE     GH101 family of glycoside hydrolases: subfamily structure and
            evolutionary connections with other families
  JOURNAL   J Bioinform Comput Biol 8 (3), 437-451 (2010)
   PUBMED   20556855
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14885.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Rhodococcus ruber"
                     /db_xref="taxon:1830"
     Protein         1..440
                     /product="putative glycoside hydrolase"
                     /calculated_mol_wt=49016
     Region          77..386
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
ORIGIN      
        1 mtlavallas vagcstsdgv pppvpsdagl ltfprtatyf lfqhdlptaq elaqydvvvi
       61 dnewghrmpr dffddvraan prtrllayvn lidhpdrlgs eeywrnryrl wqfdshgesq
      121 fpdewlakra dgtvvsewpd tsmsnltdqg prvdglsfgr yaadwvvdtv wsegvwdgif
      181 ldvwgdriys adsdrwdidr ngtdeadaqi ygedmpwgrg ieeaerimrd rmptallvan
      241 gdrtlrdrql dgrawenfad praerdprfd ieqyirltar gdhrepglam tinklgpqps
      301 sereltrarf fltatllqdg ywapmgsdyg epayidemdg gglgsgylgd piapnptlah
      361 veaqysgtag igmvapnvfr rdfdhgivlv nssdepatva lggtfrhltg tadpetndgs
      421 ttdrvtirsy sgvvllrnsq
//
LOCUS       WP_235157204             225 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1016 N-terminal domain-containing protein [Dyadobacter sp.
            CY351].
ACCESSION   WP_235157204
VERSION     WP_235157204.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036995.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17761.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..225
                     /product="DUF1016 N-terminal domain-containing protein"
                     /calculated_mol_wt=25307
     Region          20..187
                     /region_name="HTH_ParB"
                     /note="HTH domain found in ParB protein; cl40613"
                     /db_xref="CDD:477411"
ORIGIN      
        1 mqqfdsline ikglhsvmeq saakainrhi tvrnwligfy iiefeqkgsn raaygdrlle
       61 vlaeklatng lsfrnlklfr qfylaypqig qtvsaqlqyf glqpfiknlp sggtisdnal
      121 apfdniiata dqvdsntlis klsfshfsll lplknaesra fyesecikgn wsvselkrqi
      181 ntlyyersgl sidkqklrlh anetsektnm adliaihirv fgveg
//
LOCUS       WP_235157332             428 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [Rhodococcus].
ACCESSION   WP_235157332
VERSION     WP_235157332.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus
  ORGANISM  Rhodococcus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Rhodococcus"
                     /db_xref="taxon:1827"
     Protein         1..428
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=46075
     Region          1..404
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(6..7,10..11,14,51,109..110,112..114,117,137,
                     140..141,144,230,233..234,237..239,242,270,274,325..326,
                     330,334,350,353..354,357..358,361)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mgnftewfdy gvyaytatyi adsffpgdle satlltlgvf avsflvrplg glvwgplgdr
       61 lgrrqvlalt iilmgtatvl lgaipsyasi gfwaplllvl lrmiqgfstg geyggaatfm
      121 aeyspdrkrg ffgsflefgt lagfsfgali vlsidlvstd afmstwgwrl pffvagplal
      181 vglylrskle dtpvfrelea egeveqdtgt qfrsllsqyw kpivtlmglv valnvcnytl
      241 lsymptylen riglsstasl slvvigqlam mavipfagsl sdrigrkpmw lismggllll
      301 aipmymlmav sfawaivaft vlgllyvlql stisatfpam fpthvrfagf aiaynvstsl
      361 fggtapavne wlvertgndl vpafymmgac vvglvalyfv aetagaslrg rgipgvdtep
      421 hptamaka
//
LOCUS       WP_235157343             404 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase [Dyadobacter sp. CY351].
ACCESSION   WP_235157343
VERSION     WP_235157343.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 404)
  AUTHORS   Urbach,C., Evrard,C., Pudzaitis,V., Fastrez,J., Soumillion,P. and
            Declercq,J.P.
  TITLE     Structure of PBP-A from Thermosynechococcus elongatus, a
            penicillin-binding protein closely related to class A
            beta-lactamases
  JOURNAL   J Mol Biol 386 (1), 109-120 (2009)
   PUBMED   19100272
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024748.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13354.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..404
                     /product="serine hydrolase"
                     /GO_function="GO:0008800 - beta-lactamase activity
                     [Evidence IEA]"
                     /GO_process="GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=47100
     Region          64..>181
                     /region_name="Beta-lactamase2"
                     /note="Beta-lactamase enzyme family; pfam13354"
                     /db_xref="CDD:463854"
ORIGIN      
        1 mllplvslps taqfqadnfi ekllkkhper faellkdpdk yqiqilytki drnrknephf
       61 tthryqvdns kyfypastvk lpavalafek lnklgidkdt pmltgaerpe qiavksdsts
      121 enklpsvahy akkillvsdn dafnrlyefi gqeefndslh kkgftnvrit hrldspigpe
      181 nnrytnpirf ekdgkvvfeq pakyaakelk sptpiligkg ymkdnvlvne pfdfsaknyf
      241 aledqhrllk tlffpeqvpa sqrfnltpdd yrfmyqymsq fpvetsfpeh ytddyydgya
      301 kfllfgatkt rlprhirlfn kvgdaygfll dnayiadfek giefmltavi ycnedqvfnd
      361 dkydydtvgf pfmtnlgkti feyevnrkra nrpdlsrfev eydk
//
LOCUS       WP_235157537             147 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6934 family protein [Dyadobacter].
ACCESSION   WP_235157537
VERSION     WP_235157537.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046175.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22028.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..147
                     /product="DUF6934 family protein"
                     /calculated_mol_wt=16800
ORIGIN      
        1 mqqykaylte snaentrfqf qstgkrgvfe kvilftpltf difnlslvdy daakgnyndi
       61 svtdngdmpe vlvtvistih qfldsnpdkr iffegstptr trlyqiaisk iyhpessdll
      121 isgfkdgqwf afepninfeg fliekkf
//
LOCUS       WP_235157572             477 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6056 family protein [Dyadobacter sp. CY351].
ACCESSION   WP_235157572
VERSION     WP_235157572.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039639.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19528.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..477
                     /product="DUF6056 family protein"
                     /calculated_mol_wt=54904
     Region          13..468
                     /region_name="DUF6056"
                     /note="Family of unknown function (DUF6056); pfam19528"
                     /db_xref="CDD:437360"
ORIGIN      
        1 mnrfyrkyri vgnwinillm vtvlaplfal syfnhpspad dycyidtvfk fgwfeamnyy
       61 ysgwtgryfg iflnhsnpll fhwingfkil pvillsgvvf alyslfrhlt ptlsrmahlg
      121 fagvvfflyi lkiasmseaf ywmaafvtyt ipniftllwi vlvlrwyrqd tqtakvilss
      181 lagflvfaiv gssetnllii vlligawwvy rilfhrkvdg fmiamlavca vscylyfssp
      241 gnqariggnp lggnipfsvi ssfkklavls fdwifrtpli ffslawlvvl srlsagarny
      301 fsipvwyaml lfigvlsaql fpsyygvgie ptprvincvy fffligwfyv igvvfhyfkk
      361 sttspfqfsm vrygilyavl tlsislsfyr sanvrlmysd lingkaaafd kemyarydml
      421 rsskestvyl ppihskpfsi fvdddikdnp dhwwnkcmag yfgrkviimk dsqgeqq
//
LOCUS       WP_235158119             356 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Dyadobacter sp. CY351].
ACCESSION   WP_235158119
VERSION     WP_235158119.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 356)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..356
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=39572
     Region          7..343
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     Site            order(65,177,211..212,234,321)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:349870"
ORIGIN      
        1 msdqsrefly kylnnasptg feangqqiwl dyikpyiedt ivdvygtavg vigggqdykv
       61 vieahsdeis wfvnyitddg yihvrrnggs daiiapsmrv nlhtakgvvk gvfgwpaihv
      121 rdvakdavpk vhelfidvga skkdevfemg ihvgtvatfa dgldelndky ylgraldnrm
      181 ggfmiaevar mlhennvrlp ftlyvvnavq eeiglrgaem iarrlkpnla ivtdvthdtq
      241 spmynkkeqg dlksgggpvi cygpavqnnv rdmliriade kkipfqrqav srstgtdtds
      301 faystegias alislplkym httvemvhke dvqnviqlmy dvllslkgde dfryik
//
LOCUS       WP_235158260             896 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MGH1-like glycoside hydrolase domain-containing
            protein [Dyadobacter].
ACCESSION   WP_235158260
VERSION     WP_235158260.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
REFERENCE   1  (residues 1 to 896)
  AUTHORS   Ndeh,D., Rogowski,A., Cartmell,A., Luis,A.S., Basle,A., Gray,J.,
            Venditto,I., Briggs,J., Zhang,X., Labourel,A., Terrapon,N.,
            Buffetto,F., Nepogodiev,S., Xiao,Y., Field,R.A., Zhu,Y.,
            O'Neil,M.A., Urbanowicz,B.R., York,W.S., Davies,G.J., Abbott,D.W.,
            Ralet,M.C., Martens,E.C., Henrissat,B. and Gilbert,H.J.
  TITLE     Complex pectin metabolism by gut bacteria reveals novel catalytic
            functions
  JOURNAL   Nature 544 (7648), 65-70 (2017)
   PUBMED   28329766
  REMARK    Erratum:[Nature. 2017 Aug 31;548(7669):612. doi:
            10.1038/nature23659.. PMID: 29411780]
REFERENCE   2  (residues 1 to 896)
  AUTHORS   Bianchetti,C.M., Elsen,N.L., Fox,B.G. and Phillips,G.N. Jr.
  TITLE     Structure of cellobiose phosphorylase from Clostridium thermocellum
            in complex with phosphate
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 67 (Pt 11),
            1345-1349 (2011)
   PUBMED   22102229
REFERENCE   3  (residues 1 to 896)
  AUTHORS   Kurakata,Y., Uechi,A., Yoshida,H., Kamitori,S., Sakano,Y.,
            Nishikawa,A. and Tonozuka,T.
  TITLE     Structural insights into the substrate specificity and function of
            Escherichia coli K12 YgjK, a glucosidase belonging to the glycoside
            hydrolase family 63
  JOURNAL   J Mol Biol 381 (1), 116-128 (2008)
   PUBMED   18586271
  REMARK    Erratum:[J Mol Biol. 2008 Nov 14;383(3):745]
REFERENCE   4  (residues 1 to 896)
  AUTHORS   Cui,Z., Maruyama,Y., Mikami,B., Hashimoto,W. and Murata,K.
  TITLE     Crystal structure of glycoside hydrolase family 78
            alpha-L-Rhamnosidase from Bacillus sp. GL1
  JOURNAL   J Mol Biol 374 (2), 384-398 (2007)
   PUBMED   17936784
REFERENCE   5  (residues 1 to 896)
  AUTHORS   Gibson,R.P., Gloster,T.M., Roberts,S., Warren,R.A., Storch de
            Gracia,I., Garcia,A., Chiara,J.L. and Davies,G.J.
  TITLE     Molecular basis for trehalase inhibition revealed by the structure
            of trehalase in complex with potent inhibitors
  JOURNAL   Angew Chem Int Ed Engl 46 (22), 4115-4119 (2007)
   PUBMED   17455176
REFERENCE   6  (residues 1 to 896)
  AUTHORS   Hidaka,M., Honda,Y., Kitaoka,M., Nirasawa,S., Hayashi,K.,
            Wakagi,T., Shoun,H. and Fushinobu,S.
  TITLE     Chitobiose phosphorylase from Vibrio proteolyticus, a member of
            glycosyl transferase family 36, has a clan GH-L-like
            (alpha/alpha)(6) barrel fold
  JOURNAL   Structure 12 (6), 937-947 (2004)
   PUBMED   15274915
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046269.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22422.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..896
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..896
                     /product="MGH1-like glycoside hydrolase domain-containing
                     protein"
                     /calculated_mol_wt=103935
     Region          421..877
                     /region_name="GDB1"
                     /note="Glycogen debranching enzyme (alpha-1,6-glucosidase)
                     [Carbohydrate transport and metabolism]; COG3408"
                     /db_xref="CDD:442634"
ORIGIN      
        1 mahgaekvrl slqkentgwk kwgpylserq wgtvredysg ngdawnyith emalskayrw
       61 gedgiggfsd nkqhicfsfg fwnhkdkilk erifgltnre snhgedvkem yyyldstpth
      121 sytkmlykyp qnafpyeklr qengrrgked peyeimdtgv fendeyfdif iehakadeed
      181 immkvtvfnr sdqdapitvl ptimfrntws wgyeafnykp imngisnrli evthrkhgky
      241 nlyldgadel lfcenetnfk klygtannta ypkdgindyi vsnkksstvn pnnigtkaaa
      301 rftrtikage sttfrlrfvn htisepfggf edlfakrire adefyddlqr dvadadlrsi
      361 qrqayagmlw skqfyyynvy ewlkgdpaqp gpnqgrkwgr nsgwkhlyaa niismpdkwe
      421 ypwfaawdla fhcvplarvd adfakrqlei llreyymhpn gqipayewnf sdvnppvhgw
      481 atwkvyeidr eqnngvgdie flekifhkll lnftwwvnqk ddtgnnifsg gflgldnigv
      541 fdrstpmpfg gklqqadatg wmamytlnml risveialvh pvyqdmaskf fehflhiaga
      601 mesiggknss islwdeedqf yydvihipng qsillkvrsi vgliplfave ildpqnldkm
      661 pvfkrrvewv lanrpdlarl isrwfesgkg enrllsilrg hrmkmimkrm ldeneflsdy
      721 gvralskyhe enpykfying evlqvdytpa ealtdimggn snwrgpiwfp lnylifdslm
      781 kfhayygedf mveyptnsgn latikeaava iacrlidifk kdadgnravy gvdqkmqkdp
      841 nfnehilfye yfhgdngrgc gashqtgwtg lvaelihkta ketakqpeke eleisk
//
LOCUS       WP_235158288             853 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-galactosidase [Dyadobacter sp. CY351].
ACCESSION   WP_235158288
VERSION     WP_235158288.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 853)
  AUTHORS   Shimizu,T., Kobayashi,T., Ba-Thein,W., Ohtani,K. and Hayashi,H.
  TITLE     Sequence analysis of flanking regions of the pfoA gene of
            Clostridium perfringens: beta-galactosidase gene (pbg) is located
            in the 3'-flanking region
  JOURNAL   Microbiol Immunol 39 (9), 677-686 (1995)
   PUBMED   8577281
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014502.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02449.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..853
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..853
                     /product="beta-galactosidase"
                     /EC_number="3.2.1.23"
                     /GO_component="GO:0009341 - beta-galactosidase complex
                     [Evidence IEA]"
                     /GO_function="GO:0004565 - beta-galactosidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=95174
     Region          37..>291
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
     Region          <238..410
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
     Region          779..852
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mrkrifvkwq antlffslsl fvspldlsaq qpryfavsmv nendnaslpt iqaakdigfn
       61 avaltvqwgt iegkisrilk aekggdynvw kqyddqisla tslgmkialn iavstgddvt
      121 nsisdrygvd tgdgwkkeer mlvvnyegqe avfqkqggpi rpninlqfvm tslaaqstrd
      181 risafaakvm qrykylqdqn nllyvnliys rqgegefdmg stkyhyeqql dmvnaltdys
      241 qpmtnayrnw lkgkygyiey lnaawgtnhs sfdqvspkrp sgstftgpdg tdwftfrtli
      301 lketnnlfkn avkgvspntk vithhgsvyd kiarsrgtlh fneigadldg ikindevyyd
      361 hrfaidlvrs nlpgklyvne aayvtgmesv esittesfth gahvvtmfyl enalkspsav
      421 nalktlasnw vtnktvispa psnsntftls smidsdgcrt vrdtywndcd ayirwrntfd
      481 ngggrpinft mqndvvkpgc fykdlslagn gqqsasiipd gkfvhmtdan cklistvkgs
      541 gltngtdnft akvdidnqvn shdgqpyvqr hfkltpggtn ptsanitlyv sqeeltafna
      601 mstvklpena tdsdrfranl rilqwhgdmk pgnpdftidp ndddiqwdgi lnlwrirfnv
      661 ngfstfyisa vnaaplpvnl vnfngkkeen avslhwqtse etnsdhfeiq hgvdgkqwtk
      721 igevdaaaes kvlksyhfvh sfpvngknly rlkmvdqddt faysriisaa fenaekltly
      781 pnpvtsgtif lqysgaaptv tltditgrtv pvttektspd qlnvkaktrl ipglyilnad
      841 ygtkqvrykv vvd
//
LOCUS       WP_235158348             514 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: tail fiber domain-containing protein [Dyadobacter].
ACCESSION   WP_235158348
VERSION     WP_235158348.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
REFERENCE   1  (residues 1 to 514)
  AUTHORS   Schwarzer,D., Stummeyer,K., Gerardy-Schahn,R. and Muhlenhoff,M.
  TITLE     Characterization of a novel intramolecular chaperone domain
            conserved in endosialidases and other bacteriophage tail spike and
            fiber proteins
  JOURNAL   J Biol Chem 282 (5), 2821-2831 (2007)
   PUBMED   17158460
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025253.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13884.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..514
                     /product="tail fiber domain-containing protein"
                     /calculated_mol_wt=55087
     Region          221..>307
                     /region_name="LbR_YadA-like"
                     /note="YadA-like, left-handed beta-roll; cd12820"
                     /db_xref="CDD:240612"
     Region          422..474
                     /region_name="Peptidase_S74"
                     /note="Chaperone of endosialidase; pfam13884"
                     /db_xref="CDD:404724"
ORIGIN      
        1 mkskisfllk heaaknatry lvktlrsali clfclsaips faqvpnlfsf qgvarngegk
       61 ilanksinlr itihsessag psvyqelhna mtspqgifni avgggnvqsg nfstidwkis
      121 ahfiqiemdp dggnslidlg ttqllsvpya qhaneasrwq rsypvvqkfe igsdidindp
      181 ndpdiqkyll phvgegqrli wypakgafra gssngvtwee naignnstaf gssnlalgse
      241 smafglsnqa tgnssiafge ntsasgmasa slgnstnasg yaaiamgvgt vskvegsiaa
      301 giyndvsdnp vsaqlpldri fqigngisiq rsnaltvlrn gfmgigqsak dpkyfldvag
      361 rariqhnget agvffnnsan aaagfvgmvn dneigffvgg gwkyfvnsng natltgtlsq
      421 nsdrrlkrdf npltsslgki ntlkgyqyyw kdgqkdqslq tgliaqevet sfpelvttdt
      481 egfksvnymg liphliesik dlkaeverlk kdre
//
LOCUS       WP_235158352             864 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome c biogenesis protein CcsA [Dyadobacter sp. CY351].
ACCESSION   WP_235158352
VERSION     WP_235158352.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 864)
  AUTHORS   Sawyer,E.B. and Barker,P.D.
  TITLE     Continued surprises in the cytochrome c biogenesis story
  JOURNAL   Protein Cell 3 (6), 405-409 (2012)
   PUBMED   22723177
REFERENCE   2  (residues 1 to 864)
  AUTHORS   Stevens,J.M., Mavridou,D.A., Hamer,R., Kritsiligkou,P.,
            Goddard,A.D. and Ferguson,S.J.
  TITLE     Cytochrome c biogenesis System I
  JOURNAL   FEBS J 278 (22), 4170-4178 (2011)
   PUBMED   21958041
REFERENCE   3  (residues 1 to 864)
  AUTHORS   Sanders,C., Turkarslan,S., Lee,D.W. and Daldal,F.
  TITLE     Cytochrome c biogenesis: the Ccm system
  JOURNAL   Trends Microbiol 18 (6), 266-274 (2010)
   PUBMED   20382024
REFERENCE   4  (residues 1 to 864)
  AUTHORS   Page,M.D., Pearce,D.A., Norris,H.A.C. and Ferguson,S.J.
  TITLE     The Paracoccus denitrificans ccmA, B and C genes: cloning and
            sequencing, and analysis of the potential of their products to form
            a haem or apo- c-type cytochrome transporter
  JOURNAL   Microbiology (Reading) 143 (Pt 2), 563-576 (1997)
   PUBMED   9043133
REFERENCE   5  (residues 1 to 864)
  AUTHORS   Delgado,M.J., Yeoman,K.H., Wu,G., Vargas,C., Davies,A.E.,
            Poole,R.K., Johnston,A.W. and Downie,J.A.
  TITLE     Characterization of the cycHJKL genes involved in cytochrome c
            biogenesis and symbiotic nitrogen fixation in Rhizobium
            leguminosarum
  JOURNAL   J Bacteriol 177 (17), 4927-4934 (1995)
   PUBMED   7665469
REFERENCE   6  (residues 1 to 864)
  AUTHORS   Thony-Meyer,L., Fischer,F., Kunzler,P., Ritz,D. and Hennecke,H.
  TITLE     Escherichia coli genes required for cytochrome c maturation
  JOURNAL   J Bacteriol 177 (15), 4321-4326 (1995)
   PUBMED   7635817
REFERENCE   7  (residues 1 to 864)
  AUTHORS   Bonnard,G. and Grienenberger,J.M.
  TITLE     A gene proposed to encode a transmembrane domain of an ABC
            transporter is expressed in wheat mitochondria
  JOURNAL   Mol Gen Genet 246 (1), 91-99 (1995)
   PUBMED   7529870
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013725.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01578.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     gene            1..864
                     /gene="ccsA"
     Protein         1..864
                     /product="cytochrome c biogenesis protein CcsA"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /GO_process="GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /calculated_mol_wt=97393
     Region          6..>538
                     /region_name="CcmF"
                     /note="Cytochrome c biogenesis protein CcmF [Energy
                     production and conversion, Posttranslational modification,
                     protein turnover, chaperones]; COG1138"
                     /db_xref="CDD:440753"
ORIGIN      
        1 mihstigsag hllviiafvt alvatfayfk astagitidd aktwkkfgra vfyahvaavi
       61 gvvfslywii gnhyfeyhya wknsslslpt gytissfwqd qegsfllwif wnvvlgcvli
      121 ftnrsweapv mtvfalvqaf ltsmilgvvi pgldlkigst pflllkevmp dlpvyqmdan
      181 fipkdgngln pllqnywmvi hpptlflgfa ttlipfsfai aglwtkkiqe wirpalpwal
      241 fsamilcigi lmgaywayet lnfggywnwd pvenssivpw lilvaavhtm iigrknatal
      301 ktsfiltiat fililystfm trsgvlgnas vhsftdlgls gqlliylltf tivaiglliy
      361 rwkdlpsdee evstysqefw ifigatllcl sgfqilatts ipvynkiaea fgtvlnmalp
      421 adqighynkf qlwffslivi ltgvgqffww krtgkdklqa lynpllisli isaaiitiqg
      481 vkeiqyivll tsavfaivan gtiliniirg nynlsggait higvalmlig ilfssaytkv
      541 vsinnsglmi srseeftnnd nkenkenitl wlnkpekmgd ymltwrdvrv eprkipgyip
      601 kswvdiiegd fhavalrdiv vdgkkynvkg dtielfpenf yyeieyreps grifslfprv
      661 qinprmggiv sspdiqrkvd kdlythvnmv tnptaepvws qtenftismr dtffvndyva
      721 ildnvvrteq vegvklgdgd aavkavirvl dkdkeyvvtp sfvirdrmva rkpevnndlg
      781 mriqfqeinp qtgqfsfavn ttqrdfivmk aiekplinil wlgtfvlvig fimatirrfk
      841 dfikmrdken qsadkkpkik vqpv
//
LOCUS       WP_235158361             576 aa            linear   BCT 02-MAR-2025
DEFINITION  M14 family metallopeptidase [Dyadobacter sp. CY351].
ACCESSION   WP_235158361
VERSION     WP_235158361.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 576)
  AUTHORS   Makarova,K.S. and Grishin,N.V.
  TITLE     The Zn-peptidase superfamily: functional convergence after
            evolutionary divergence
  JOURNAL   J Mol Biol 292 (1), 11-17 (1999)
   PUBMED   10493853
REFERENCE   2  (residues 1 to 576)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10154684
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..576
                     /product="M14 family metallopeptidase"
                     /EC_number="3.4.17.-"
                     /GO_function="GO:0004181 - metallocarboxypeptidase
                     activity [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=66591
     Region          87..301
                     /region_name="M14-like"
                     /note="Peptidase M14-like domain; uncharacterized
                     subgroup; cd06241"
                     /db_xref="CDD:349460"
     Site            order(97,100,160,169..170,199..200,205,287)
                     /site_type="active"
                     /db_xref="CDD:349460"
ORIGIN      
        1 mrlffysilf sftlsaqaqy ttrfessggk qtptyeegia fykllakdfs qiqitekglt
       61 dsgyplhlvl ysksktfdik klksqqkail linnaihpge sdgvdasmml lrdiavnpgk
      121 fpeldnviia vipfynigga lnrnsttrtn qagpeeygfr gnarnydlnr dfikndtrna
      181 rsfaaifhel dpdlfadthv sngadyqyvm tldyaqkdkl ggklgyfndk vflpymykhl
      241 kesgfeatpy vnswgqtpdk gfvqfpdwpr ystgyaalfh tigvmtethm lkpydkrvaa
      301 tyayllgnik flarnrrell klrkdtkeav ktqekfavsw evnkvkntqi dfkgfepeyi
      361 tskvsgaqrl synrskpftk kipfydtysp ldevtkpvay iipqgwhnii dlmklngvev
      421 kqlendaeme vetyyiqdle tpkqpfeghy whtsvttktv nqqvkfkkgd wyipvnqwtn
      481 ryivetlepk gvdsffkwnf fdtilqskeh ysayvfedla aellakdvsl rikladrrkn
      541 dpefaksaaa qldfiydnsa yrekeymryp vfrlmk
//
LOCUS       WP_235158384             212 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: SatD family protein [Dyadobacter].
ACCESSION   WP_235158384
VERSION     WP_235158384.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
REFERENCE   1  (residues 1 to 212)
  AUTHORS   Kremer,B.H., van der Kraan,M., Crowley,P.J., Hamilton,I.R.,
            Brady,L.J. and Bleiweis,A.S.
  TITLE     Characterization of the sat operon in Streptococcus mutans:
            evidence for a role of Ffh in acid tolerance
  JOURNAL   J Bacteriol 183 (8), 2543-2552 (2001)
   PUBMED   11274114
REFERENCE   2  (residues 1 to 212)
  AUTHORS   Gutierrez,J.A., Crowley,P.J., Cvitkovitch,D.G., Brady,L.J.,
            Hamilton,I.R., Hillman,J.D. and Bleiweis,A.S.
  TITLE     Streptococcus mutans ffh, a gene encoding a homologue of the 54 kDa
            subunit of the signal recognition particle, is involved in
            resistance to acid stress
  JOURNAL   Microbiology (Reading) 145 (Pt 2), 357-366 (1999)
   PUBMED   10075418
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16264.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..212
                     /product="SatD family protein"
                     /calculated_mol_wt=23583
     Region          5..188
                     /region_name="SatD"
                     /note="SatD family (SatD); pfam16264"
                     /db_xref="CDD:435244"
ORIGIN      
        1 mkkhyavita dmvnstffsr eqttewlsem idllrenpaf dwvlkpeiyr gdsfqgvlkn
       61 pneamyaail aranmrthak ntdlrvaigi gkaeqltdra gtsdgeafrl sghladnirk
      121 qkarigialp tpseplnatl dlletlienw ttaqseviva lllkkninqi seqlgisqpa
      181 asqrvasskw wavenflatf pkhlslytkt ks
//
LOCUS       WP_235158406             312 aa            linear   BCT 02-MAR-2025
DEFINITION  relaxase/mobilization nuclease domain-containing protein
            [Dyadobacter sp. CY351].
ACCESSION   WP_235158406
VERSION     WP_235158406.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 312)
  AUTHORS   Meyer,R.
  TITLE     Identification of the mob genes of plasmid pSC101 and
            characterization of a hybrid pSC101-R1162 system for conjugal
            mobilization
  JOURNAL   J Bacteriol 182 (17), 4875-4881 (2000)
   PUBMED   10940031
REFERENCE   2  (residues 1 to 312)
  AUTHORS   Bravo-Angel,A.M., Gloeckler,V., Hohn,B. and Tinland,B.
  TITLE     Bacterial conjugation protein MobA mediates integration of complex
            DNA structures into plant cells
  JOURNAL   J Bacteriol 181 (18), 5758-5765 (1999)
   PUBMED   10482518
REFERENCE   3  (residues 1 to 312)
  AUTHORS   Byrd,D.R. and Matson,S.W.
  TITLE     Nicking by transesterification: the reaction catalysed by a
            relaxase
  JOURNAL   Mol Microbiol 25 (6), 1011-1022 (1997)
   PUBMED   9350859
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015397.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03432.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..312
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /calculated_mol_wt=35634
     Region          8..241
                     /region_name="Relaxase"
                     /note="Relaxase/mobilization nuclease domain; cl21589"
                     /db_xref="CDD:451322"
ORIGIN      
        1 migkimigss fggairyvmq kekavvlhge girtqdvksa ihdfngqrlm npelgkavgh
       61 lvlswsafdk dklsqkimvh raaeymakmk iqntqylvve hrdtnqphih ilynrvdnag
      121 ksisdqfqkr mnqkvckemt lkhgyyigkg ktlvnrgklr gkdkiryela dqiriasrsa
      181 vdwkqlegal sssgialiyk yksgtnqiqg isfekdgkvl kgskvdrsms fpaidrtlre
      241 nfqhqlavrc rmldrgilpp aqekmqthry glpnypeenl lkdlmdpvnq retinpelnr
      301 khkrkksrgl hl
//
LOCUS       WP_235158422             437 aa            linear   BCT 02-MAR-2025
DEFINITION  neutral/alkaline non-lysosomal ceramidase N-terminal
            domain-containing protein [Dyadobacter sp. CY351].
ACCESSION   WP_235158422
VERSION     WP_235158422.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 437)
  AUTHORS   Inoue,T., Okino,N., Kakuta,Y., Hijikata,A., Okano,H., Goda,H.M.,
            Tani,M., Sueyoshi,N., Kambayashi,K., Matsumura,H., Kai,Y. and
            Ito,M.
  TITLE     Mechanistic insights into the hydrolysis and synthesis of ceramide
            by neutral ceramidase
  JOURNAL   J Biol Chem 284 (14), 9566-9577 (2009)
   PUBMED   19088069
REFERENCE   2  (residues 1 to 437)
  AUTHORS   El Bawab,S., Roddy,P., Qian,T., Bielawska,A., Lemasters,J.J. and
            Hannun,Y.A.
  TITLE     Molecular cloning and characterization of a human mitochondrial
            ceramidase
  JOURNAL   J Biol Chem 275 (28), 21508-21513 (2000)
   PUBMED   10781606
REFERENCE   3  (residues 1 to 437)
  AUTHORS   Tani,M., Okino,N., Mori,K., Tanigawa,T., Izu,H. and Ito,M.
  TITLE     Molecular cloning of the full-length cDNA encoding mouse neutral
            ceramidase. A novel but highly conserved gene family of
            neutral/alkaline ceramidases
  JOURNAL   J Biol Chem 275 (15), 11229-11234 (2000)
   PUBMED   10753931
REFERENCE   4  (residues 1 to 437)
  AUTHORS   Okino,N., Ichinose,S., Omori,A., Imayama,S., Nakamura,T. and Ito,M.
  TITLE     Molecular cloning, sequencing, and expression of the gene encoding
            alkaline ceramidase from Pseudomonas aeruginosa. Cloning of a
            ceramidase homologue from Mycobacterium tuberculosis
  JOURNAL   J Biol Chem 274 (51), 36616-36622 (1999)
   PUBMED   10593963
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016612.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04734.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..437
                     /product="neutral/alkaline non-lysosomal ceramidase
                     N-terminal domain-containing protein"
                     /calculated_mol_wt=47859
     Region          37..>255
                     /region_name="PTZ00487"
                     /note="ceramidase; Provisional"
                     /db_xref="CDD:240437"
ORIGIN      
        1 mryltmrflp vciilahivf tnaafaqnfr asvvkvditp dnsqqllgyq arkstgvhdk
       61 iyhrivamdd gktqfyiist diclispsqy dkltarlqkq lgitpmqvww aaththsape
      121 vgpaglpsvf lgdrykhefd aqytdlveqk ivdgmveakk nlapaklgtg wgssnaninr
      181 rarsiegkts lgmnpdgpvd rrigllrlek adgsllalia nyamhgtvms genllisgdg
      241 pgivseyveq ktgapllyin gaagniapiy svypspaagr lnqfkamlge kiidasktit
      301 atsnqvtlka agtiveiprk eglgwpddlk nytrttkagv nmirlpvrfl kvnddvaiws
      361 aplelfceis nevrdrspfp ytfyfgytng wlgyllaeee lqyggyeptv spyapgaaks
      421 lteavvnylq gdmrsgh
//
LOCUS       WP_235158475             541 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: RagB/SusD family nutrient uptake outer membrane
            protein [Dyadobacter].
ACCESSION   WP_235158475
VERSION     WP_235158475.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
REFERENCE   1  (residues 1 to 541)
  AUTHORS   Goulas,T., Garcia-Ferrer,I., Hutcherson,J.A., Potempa,B.A.,
            Potempa,J., Scott,D.A. and Gomis-Ruth,F.X.
  TITLE     Structure of RagB, a major immunodominant outer-membrane surface
            receptor antigen of Porphyromonas gingivalis
  JOURNAL   Mol Oral Microbiol 31 (6), 472-485 (2016)
   PUBMED   26441291
REFERENCE   2  (residues 1 to 541)
  AUTHORS   Bolam,D.N. and Koropatkin,N.M.
  TITLE     Glycan recognition by the Bacteroidetes Sus-like systems
  JOURNAL   Curr Opin Struct Biol 22 (5), 563-569 (2012)
   PUBMED   22819666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07980.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..541
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /calculated_mol_wt=60028
     Region          68..461
                     /region_name="SusD"
                     /note="starch binding outer membrane protein SusD;
                     cl21747"
                     /db_xref="CDD:451378"
ORIGIN      
        1 mqfkikllaa igtlmlmqgc seefldrppl daltsgnfyk tdaeilagta plynivwfdf
       61 ndkanmsfqe aragnlnsnd rtayvkhaip stdvntllpg yksfykiiaq snnaykaike
      121 atgstasatv kaqglgecrf mratayyylv tnwgavpivy dnvaqlnlpp vrnriedvwk
      181 lliqdyrfaa enlpatadqg rltkysaegm larmylmrag lnqkgtrnqs dldsakyyae
      241 dvitksgrtl aptyaelfes annnssknnp eslfslqwmp vsspwgvnns fqayfaydan
      301 itttgdgwga aqglsadlvk yfvenpadsl rrksiamfds dvypniqkat gglkynrpaq
      361 lsaikkyivg spadngglgg fmaaninsym lrlaevyliy adavlgnaat tndakalqyy
      421 navrkragla aktsltfedi fkerrietvf egnswneivr wyyfnpakai aytaaqrren
      481 ytmtyvpgst npkkytvtys paeyyplsen tlylpfpege lvnapslkge pvpfdfstlv
      541 d
//
LOCUS       WP_235158508            1056 aa            linear   BCT 02-MAR-2025
DEFINITION  CheR family methyltransferase [Dyadobacter sp. CY351].
ACCESSION   WP_235158508
VERSION     WP_235158508.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 1056)
  AUTHORS   Djordjevic,S. and Stock,A.M.
  TITLE     Crystal structure of the chemotaxis receptor methyltransferase CheR
            suggests a conserved structural motif for binding
            S-adenosylmethionine
  JOURNAL   Structure 5 (4), 545-558 (1997)
   PUBMED   9115443
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013867.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01739.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..1056
                     /product="CheR family methyltransferase"
                     /calculated_mol_wt=118618
     Region          <2..164
                     /region_name="CheR"
                     /note="Methylase of chemotaxis methyl-accepting proteins
                     [Signal transduction mechanisms]; COG1352"
                     /db_xref="CDD:440963"
     Region          335..>410
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     Region          407..659
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          720..1052
                     /region_name="BaeS"
                     /note="Signal transduction histidine kinase [Signal
                     transduction mechanisms]; COG0642"
                     /db_xref="CDD:440407"
ORIGIN      
        1 mwvagcstgq eaysmaimtl evlgakassl piqifatdls dsaiakarmg vftkgevldv
       61 sparlerffs kvddhyrvnk lvrdlcvfap hnllsdppfs rmdliscrnl liylddelqk
      121 kvfttfhyal kpdgylllgk sesvggssmy fsqiektqkv fvrknntrak isidmafksn
      181 spslpiktlt tkttelvtvs dldklvdnll laeyvpasvv idqdleiiqf rgvtspflqh
      241 stgkaslnla kmahpslvfe lrnivhkark taerqrkdgl eisypgkpiy vnieavpitn
      301 panqqlflvl feqvsenmah vsrtgdtdqr hrqleaelta lrqdmhsive eqeasneelq
      361 saneeivssn eelqsineel etskeeiesa neelqtinqe lqnrndqlte syeyseails
      421 tineatlvld eymriksanq afyrffstda ertegqliye lgnrqfdfpe frdllhqlga
      481 ynapvsglev nvrisaneqr tmviharklt lhrkqitllg feditvhrre qrllnerkqw
      541 feklvdnapa miwvcaadgn isflnkawln ftgqsvgesq atfyralhpd dltnyqatfs
      601 enlkhqtefs leyrlkrsdg qyrwilenas pmfsddnift gytgsgvdih lqktlteqln
      661 vhvdektvel snanqkltgv atsllavlds spasiaffka iegedgqpvd ftlvvcnqkf
      721 sgdfgksvsd lvgmlasgll slqhqqemrq vyltrnpfye ehlldgnprw latsmtrhdh
      781 giaiteldit dfkeggfket klleqlhssn emveslaamk eyvrhrgafl rssfhdlrgs
      841 fgiivgatal lntmdthher erilemlhrn liqvsemmnp lldysrlesg eeklhiksfn
      901 agslltelca gseqlalekg lsiqfegpgd llvegddvkv rriaqnliln alkytreggv
      961 svrwqaidse naqvalwkfv vsdtgpgltq hllaklngtq tenstsdves ntdghgegig
     1021 lfiikrlcei lgaelsvksq pdvgtsvevt ipqsyp
//
LOCUS       WP_235158539             237 aa            linear   BCT 02-MAR-2025
DEFINITION  HK97 family phage prohead protease [Dyadobacter sp. CY351].
ACCESSION   WP_235158539
VERSION     WP_235158539.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016471.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04586.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..237
                     /product="HK97 family phage prohead protease"
                     /GO_function="GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /GO_process="GO:0019082 - viral protein processing
                     [Evidence IEA]"
                     /calculated_mol_wt=26779
     Region          21..161
                     /region_name="Peptidase_S78"
                     /note="Caudovirus prohead serine protease; cl01521"
                     /db_xref="CDD:470233"
ORIGIN      
        1 myiyksqgqp lsikdidvkn gimtgilsdf hqkdsdgdii kfgaytktiq ewgpksntpr
       61 ikwlidhdks rllgkflvle erqeglyyeg kvgkhadaqd fllkaedeli sehsvyinpv
      121 kqsynkseda niitevkmwe gsslhcwgan satpflgfks eeeligqfak lykalhhgty
      181 sdatmiefqe qynaigkllk smqpdtpget teknlsqsqd knlielfknt slngivh
//
LOCUS       WP_235158579             275 aa            linear   BCT 02-MAR-2025
DEFINITION  MbnP family protein [Dyadobacter sp. CY351].
ACCESSION   WP_235158579
VERSION     WP_235158579.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 275)
  AUTHORS   Kenney,G.E., Dassama,L.M.K., Manesis,A.C., Ross,M.O., Chen,S.,
            Hoffman,B.M. and Rosenzweig,A.C.
  TITLE     MbnH is a diheme MauG-like protein associated with microbial copper
            homeostasis
  JOURNAL   J Biol Chem 294 (44), 16141-16151 (2019)
   PUBMED   31511324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042462.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20243.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..275
                     /product="MbnP family protein"
                     /calculated_mol_wt=29972
     Region          39..251
                     /region_name="MbnP"
                     /note="pfam20243"
                     /db_xref="CDD:466394"
ORIGIN      
        1 mksinqyfat alavcavfll fscstpasps pepdapaggk lrlefdnvvg dknlvlgsvt
       61 yknasnedfv vtkfnyfisn ikltkadgsv fvvpqdssyf lvkedtktsq fvtlynvpfa
      121 dytaaefmvg vdstrntapi ekrqgvldps gsmmddgmyw awnsgyifvk legtsskgsp
      181 vngkfyyhig lfggynertv nntrvvkmsf gqlkasvtes avpevhllvd vlkvfdgpst
      241 nisiaaynsi mggqpdksqq iasnyvnmfs ldhih
//
LOCUS       WP_235158716             429 aa            linear   BCT 02-MAR-2025
DEFINITION  M43 family zinc metalloprotease [Dyadobacter sp. CY351].
ACCESSION   WP_235158716
VERSION     WP_235158716.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 429)
  AUTHORS   Chen,B.K., Overgaard,M.T., Bale,L.K., Resch,Z.T., Christiansen,M.,
            Oxvig,C. and Conover,C.A.
  TITLE     Molecular regulation of the IGF-binding protein-4 protease system
            in human fibroblasts: identification of a novel inducible inhibitor
  JOURNAL   Endocrinology 143 (4), 1199-1205 (2002)
   PUBMED   11897673
REFERENCE   2  (residues 1 to 429)
  AUTHORS   Mazerbourg,S., Overgaard,M.T., Oxvig,C., Christiansen,M.,
            Conover,C.A., Laurendeau,I., Vidaud,M., Tosser-Klopp,G., Zapf,J.
            and Monget,P.
  TITLE     Pregnancy-associated plasma protein-A (PAPP-A) in ovine, bovine,
            porcine, and equine ovarian follicles: involvement in IGF binding
            protein-4 proteolytic degradation and mRNA expression during
            follicular development
  JOURNAL   Endocrinology 142 (12), 5243-5253 (2001)
   PUBMED   11713222
REFERENCE   3  (residues 1 to 429)
  AUTHORS   Chelius,D., Conover,C.A., Baldwin,M.A. and Spencer,E.M.
  TITLE     Characterization of the enzymatic specificity of the IGF-dependent
            insulin-like growth factor binding protein-4 (IGFBP-4) protease
  JOURNAL   Growth Horm IGF Res 10 (6), 360-366 (2000)
   PUBMED   11161967
REFERENCE   4  (residues 1 to 429)
  AUTHORS   Overgaard,M.T., Haaning,J., Boldt,H.B., Olsen,I.M., Laursen,L.S.,
            Christiansen,M., Gleich,G.J., Sottrup-Jensen,L., Conover,C.A. and
            Oxvig,C.
  TITLE     Expression of recombinant human pregnancy-associated plasma
            protein-A and identification of the proform of eosinophil major
            basic protein as its physiological inhibitor
  JOURNAL   J Biol Chem 275 (40), 31128-31133 (2000)
   PUBMED   10913121
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017393.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05572.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..429
                     /product="M43 family zinc metalloprotease"
                     /calculated_mol_wt=47873
     Region          99..335
                     /region_name="ZnMc_pappalysin_like"
                     /note="Zinc-dependent metalloprotease, pappalysin_like
                     subfamily. The pregnancy-associated plasma protein A
                     (PAPP-A or pappalysin-1) cleaves insulin-like growth
                     factor-binding proteins 4 and 5, thereby promoting cell
                     growth by releasing bound growth factor; cd04275"
                     /db_xref="CDD:239802"
     Site            order(252..253,256,262)
                     /site_type="active"
                     /db_xref="CDD:239802"
     Region          360..428
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     pfam18962"
                     /db_xref="CDD:436869"
ORIGIN      
        1 mikpssklll tfllliiska fvlaqdsdsl lkrcasteld altisrfpal qqlrikseqa
       61 iqkriqanrt slrtnadeii tipvvvhvvh seedmsigga nneniteaqi qsqidvlned
      121 ygntsgykgf ytdslgvdtr irfklvtvlr tyneknqfsp iteaddlaei spawatsryl
      181 niwvcrladr ylgtsqfpvv telndlttgl stsedeavra ltdgviidfr yfgrnspait
      241 ssvyslgrtt thevghwlgl ihiwgdrncg tdhcddtpta ftknettdis ctpvfsecrg
      301 vttrnmieny mdyspdgcms vftndqkerm havlelsprr aklvefskis gedllvelsp
      361 npvsetltas vftpnfqlft vevfnqrgql itsgatnlsy ldvqkfpsgl yyyrvssggq
      421 tvtkrfvvr
//
LOCUS       WP_235158746             508 aa            linear   BCT 02-MAR-2025
DEFINITION  SusD/RagB family nutrient-binding outer membrane lipoprotein
            [Dyadobacter sp. CY351].
ACCESSION   WP_235158746
VERSION     WP_235158746.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 508)
  AUTHORS   Koropatkin,N., Martens,E.C., Gordon,J.I. and Smith,T.J.
  TITLE     Structure of a SusD homologue, BT1043, involved in mucin O-glycan
            utilization in a prominent human gut symbiont
  JOURNAL   Biochemistry 48 (7), 1532-1542 (2009)
   PUBMED   19191477
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024181.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12771.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..508
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /calculated_mol_wt=56037
     Region          29..477
                     /region_name="SusD-like_2"
                     /note="Starch-binding associating with outer membrane;
                     pfam12771"
                     /db_xref="CDD:463695"
ORIGIN      
        1 mkhlpkylii ltllatscdk gfeevnvnpv qatsldpiyf fsnaefssai athnyqmqiv
       61 qqintpftgv veggnhnvvs dpnsnanfns lylqngpvnl lttvisqtkd daarsnlynm
      121 sriwkayvfm vlvdtygdvp yfqagkafle ginlpkyddq kliyedilke ltegtkalda
      181 tkpiesgdlf fkgniaqwkk lgnslllraa mrytkldpak akqfvaiavd pangglqdsn
      241 adnayiafns tfnhplagyf qgtergnvym gkafidylkt tadprlkvia vkyeapgnpi
      301 atagaedtnp anqegmpygy nestitsvag fpgkigsafk ysqinrrtvg kidapeffit
      361 ysqtslllae avqrgwatgn vkalyeagvk ahmaqmatyd vsatipeaaq tayltanpfv
      421 pakaleqinw qywvssflng seawanfrrs gfpvlpinmy pgkdpsvkdf ikrlvypvre
      481 rsvneanyke avarmgpdel gtpifwdk
//
LOCUS       WP_235158775             193 aa            linear   BCT 02-MAR-2025
DEFINITION  chemotaxis protein CheB [Dyadobacter sp. CY351].
ACCESSION   WP_235158775
VERSION     WP_235158775.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 193)
  AUTHORS   West,A.H., Martinez-Hackert,E. and Stock,A.M.
  TITLE     Crystal structure of the catalytic domain of the chemotaxis
            receptor methylesterase, CheB
  JOURNAL   J Mol Biol 250 (2), 276-290 (1995)
   PUBMED   7608974
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013502.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01339.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..193
                     /product="chemotaxis protein CheB"
                     /GO_component="GO:0005737 - cytoplasm [Evidence IEA]"
                     /GO_function="GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA]"
                     /GO_function="GO:0008984 - protein-glutamate
                     methylesterase activity [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /GO_process="GO:0006935 - chemotaxis [Evidence IEA]"
                     /calculated_mol_wt=21383
     Region          11..170
                     /region_name="CheB_like"
                     /note="methylesterase CheB domain family; cl03170"
                     /db_xref="CDD:470753"
ORIGIN      
        1 mnsakdesls lvlmggssgs fvilediikl lkvpisfavi fvlhrgryss svlpdlfktk
       61 tdvhmsephh ldpitsntiy falpdyhllv gedhrfyydh tepdffsrps idatfmsaam
      121 sgiplkaaml fsgssqdgae glkllaekgc ptyvqspafa efprmpeeal lkyqkhklle
      181 engfyetisd lls
//
LOCUS       WP_235158777            1109 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Dyadobacter sp. CY351].
ACCESSION   WP_235158777
VERSION     WP_235158777.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 1109)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..1109
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=123965
     Region          3..494
                     /region_name="CHASE3"
                     /note="Extracytoplasmic sensor domain CHASE3 (specificity
                     unknown) [Signal transduction mechanisms]; COG5278"
                     /db_xref="CDD:444089"
     Region          6..141
                     /region_name="CHASE3"
                     /note="CHASE3 domain; pfam05227"
                     /db_xref="CDD:428379"
     Region          <437..1107
                     /region_name="PRK11107"
                     /note="hybrid sensory histidine kinase BarA; Provisional"
                     /db_xref="CDD:236848"
ORIGIN      
        1 mqqentgwvn htrevmaist nvrnklltae snvrgyaltn nvqfennyrq aadnvwqqld
       61 amrklvrdnr iqisrldslm pimqvrldlm dqqyellkag nvkpdtikai vlkgkvlssq
      121 idfvfkrien qeegllaere qlaagsssea tqyivfgtlv flcvvfllyy firrtynaqi
      181 asenetinan kqleklsled qeknwilnna vklaeairge pthrelarkf lnklvevtgs
      241 pvgtmylvnr sgnllqlast ygienagsvp deikfgqgml gqmasdqvel rqvevpaayf
      301 kiasttgstn pamvyiktvs fegavtavie vgylndpgdk vskllemvsd nvavaivaah
      361 arettnelle ktqlqaeele sqqeelrvtn eelmrqtqll qvseeelrvq qeelkqinte
      421 leekafmlee qkstieeard qiqikadele ksgrfksefl anmshelrtp lnsililsri
      481 lgenkgarln eeeqryasvi fnsgndlltl indildlakv esgkielmhe hvstelllse
      541 vrntfqkiae nkglelkiek sescpdtlfl dqvrllqiir nlvsnavkft sapgmvslni
      601 rqeashlffe vsdtgigiap ekqqsifeaf qqadgstsrk yggtglglsi srelanlfkg
      661 sislrseagv gstftlkipv qdqeptseaa amplemveiq kpvakvpedd ngkeyrlllv
      721 eddeifaadm sskardsgfe vvvadtgrka melvqsfrpt aiildmhlpd msgdevlkel
      781 kadpktslip vhtvssgsyl dmdmvkegai gfmqkpvdeq saehiftllk lesgktekqk
      841 illveddqyq skylgdflta nnifvlyafs aaealeilnt ktvdgiildi rlsdmngldl
      901 ldeikkhsvw savpvvinta edldqadltr vmkyahpvvm ktkksnerll devklflkni
      961 qpktfkgpek rdafsnpvvh senvfvgkki lvadddmrni falsavlees gfkieiatng
     1021 reaiekledt peidlvlmdv mmpemdgiea trkirevprw anlpiiavta kamqgdreqc
     1081 laagandyis kpvdvdklla likvwlhsa
//
LOCUS       WP_235158817             493 aa            linear   BCT 02-MAR-2025
DEFINITION  Eco57I restriction-modification methylase domain-containing protein
            [Dyadobacter sp. CY351].
ACCESSION   WP_235158817
VERSION     WP_235158817.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 493)
  AUTHORS   Schluckebier,G., Kozak,M., Bleimling,N., Weinhold,E. and Saenger,W.
  TITLE     Differential binding of S-adenosylmethionine S-adenosylhomocysteine
            and Sinefungin to the adenine-specific DNA methyltransferase M.TaqI
  JOURNAL   J Mol Biol 265 (1), 56-67 (1997)
   PUBMED   8995524
REFERENCE   2  (residues 1 to 493)
  AUTHORS   Janulaitis,A., Vaisvila,R., Timinskas,A., Klimasauskas,S. and
            Butkus,V.
  TITLE     Cloning and sequence analysis of the genes coding for Eco57I type
            IV restriction-modification enzymes
  JOURNAL   Nucleic Acids Res 20 (22), 6051-6056 (1992)
   PUBMED   1334261
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019291.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07669.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..493
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=55952
     Region          9..230
                     /region_name="HsdM"
                     /note="Type I restriction-modification system, DNA
                     methylase subunit [Defense mechanisms]; COG0286"
                     /db_xref="CDD:440055"
     Region          <38..436
                     /region_name="YeeA"
                     /note="Type II restriction/modification system,
                     endonuclease and methylase domains [Defense mechanisms];
                     COG1002"
                     /db_xref="CDD:440626"
ORIGIN      
        1 masqtrtygk kkllgqvytp lhivkkilqd sgfydgdlah kkvldpacgd grflvpiveh
       61 iikttpshql tdrlnqiygw didpdalesc rknldaltep lganinwnlk lcdalkqfrk
      121 rlkfdfifgn ppyiriqhlp iaqrtfiqsh yafckkgstd aymaffelai kllspggicg
      181 fitpngflts etgkplrsyf qqernvkqit nygsvpifgn tatysaivif gnldqaqftf
      241 eqcesadlqy kkrdinfsel aeskpwqlsv krsehingqr lgdmcqisvg lttladayyl
      301 ftiiredsnl vyaqnkngmq vvlekdilrp ivkasklkss adpvteyilf pyqkdaagkq
      361 riipenvlqe qfpqtysyfl kvkpaldrrd ngkvnavawy afgraqglds tfgkkivfsp
      421 mnrapnfvly enpdvtvysg yfikydgdye vlltqlnspr msefidvagr dfqggykgyn
      481 kkiienfiit lte
//
LOCUS       WP_235158839             146 aa            linear   BCT 02-MAR-2025
DEFINITION  PIN domain-containing protein [Dyadobacter sp. CY351].
ACCESSION   WP_235158839
VERSION     WP_235158839.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021634.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10130.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..146
                     /product="PIN domain-containing protein"
                     /calculated_mol_wt=16383
     Region          1..144
                     /region_name="COG5378"
                     /note="Predicted nucleic acid-binding protein, contains
                     PIN domain [General function prediction only]"
                     /db_xref="CDD:444143"
ORIGIN      
        1 mivvidtnil fsacispnnr iseilfsplp nieriscyya maelfkhqsk ivqlskqpve
       61 gvstllytim kqvdflnekm iatehfeead rltagvdsnd lafvalslqk ngmlwtgdkk
      121 ltnhlkslgf drvvntndly elldis
//
LOCUS       WP_235158875             172 aa            linear   BCT 02-MAR-2025
DEFINITION  NUMOD4 domain-containing protein [Escherichia coli].
ACCESSION   WP_235158875
VERSION     WP_235158875.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Sitbon,E. and Pietrokovski,S.
  TITLE     New types of conserved sequence domains in DNA-binding regions of
            homing endonucleases
  JOURNAL   Trends Biochem Sci 28 (9), 473-477 (2003)
   PUBMED   13678957
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019106.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07463.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..172
                     /product="NUMOD4 domain-containing protein"
                     /GO_function="GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /calculated_mol_wt=18996
     Region          3..61
                     /region_name="NUMOD4"
                     /note="NUMOD4 motif; pfam07463"
                     /db_xref="CDD:462171"
     Region          69..112
                     /region_name="HNHc"
                     /note="HNH nucleases; HNH endonuclease signature which is
                     found in viral, prokaryotic, and eukaryotic proteins. The
                     alignment includes members of the large group of homing
                     endonucleases, yeast intron 1 protein, MutS, as well as
                     bacterial colicins, pyocins, and...; cl00083"
                     /db_xref="CDD:469607"
     Region          <87..>145
                     /region_name="PHA00280"
                     /note="putative NHN endonuclease"
                     /db_xref="CDD:106901"
ORIGIN      
        1 mpeawkdisg fegiyqisda gnlrsldrtv lnkgsgctyp ikgkspkpry dadgylitdl
       61 wkagkkvtvk ihrlvaaafi pgsapevdhi ngrrddnrav nlrwaslsqn ranshtrknk
      121 sgvvgvrfse gkknpwqayg rlngkfkslg hfptkqlaaa arrkhiqeim na
//
LOCUS       WP_235158533             139 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail tube protein [Dyadobacter sp. CY351].
ACCESSION   WP_235158533
VERSION     WP_235158533.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 139)
  AUTHORS   Johnsen,M.G., Appel,K.F., Madsen,P.L., Vogensen,F.K., Hammer,K. and
            Arnau,J.
  TITLE     A genomic region of lactococcal temperate bacteriophage TP901-1
            encoding major virion proteins
  JOURNAL   Virology 218 (2), 306-315 (1996)
   PUBMED   8610457
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017961.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06199.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..139
                     /product="phage tail tube protein"
                     /calculated_mol_wt=14480
     Region          1..138
                     /region_name="Phage_TTP_12"
                     /note="Lambda phage tail tube protein, TTP; cl11463"
                     /db_xref="CDD:472191"
ORIGIN      
        1 makfngsllk mfvagapdke ikdtrdisit vntaeidvtt rdsggwkeyl ggvrswtgka
       61 tgivdwatts gkvsfgelia ydiarapvai efstlatgdv syagngyftn vtfsaphege
      121 vtwnadvigt galvpaaia
//
LOCUS       WP_235159004            1244 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4347 domain-containing protein [Dyadobacter sp. CY351].
ACCESSION   WP_235159004
VERSION     WP_235159004.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025611.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14252.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1244
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..1244
                     /product="DUF4347 domain-containing protein"
                     /calculated_mol_wt=132296
     Region          34..195
                     /region_name="DUF4347"
                     /note="Domain of unknown function (DUF4347); pfam14252"
                     /db_xref="CDD:433811"
     Region          <327..1042
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          540..651
                     /region_name="Big_5"
                     /note="Bacterial Ig-like domain; pfam13205"
                     /db_xref="CDD:463809"
     Region          1174..1238
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mkkrtftlsl fllsllafsi vtyqkfsrkt vsdlviides lkdfrsladg lspgseviyv
       61 snsregfrkl tkqltaqgka ervhiithgt dgnfvlgqtq lndaniaehn sfwqslgnvl
      121 evgksslliy sceltasrsg egfvqrihrm lgvpvaasnd qtgsarrggd wdleyvvgki
      181 vkehvftilk fngllvpafs qltggsspfs aitisgddql iygdfdadgd idihsypggt
      241 vnefwqnngs gsfakvtgsa dpfekvnena vfysasgafv adwdndgddd iyvpmrnsnq
      301 neknfyyrnd ngkyellsga sspfsginvs gnnqlifgdf dndgdvdlhn ypgndldnqf
      361 wrnngsgafs nvtgsqnpfd glpgkaafss aqyahvedwd ndgdvdifvs rvggnsvrdy
      421 yrndngvysl ktggenpfng mtiasdnqil sgdfdsdgdi dlhtsdgsvt lvfwqnngsg
      481 aftqvtgagn pfnslpnsga fynnamksfv adwdndgdad vfttnytgan qkyffqqngt
      541 ppritatspt naatgisvss nisltfsqav tgaagkyiqi rrlyddavfa tiaansaqvt
      601 gngsntitid patdleggtt yyvivdkaaf adtegrifeg vsgatwlrft tgipavaptv
      661 ttasaseial ttakvggevt anggaavtdy givwstsaap tielsnkvgi gsgngafstt
      721 vtglpagtri ylrayatnsi gtsygseidf ytqtsvtsvt rlssnptneg tvsyqvvfaq
      781 svtiddasvf tlstsgvsga lvsgisgsgt tydvtintgs gngsiklevt gltgtipnln
      841 aaftsadayt iykvsnagds yrtavtdgtw ntpgdwqssq dnsfwitass fpnasaastv
      901 itsghtmrmp dnisfnvnnf tvngllqsgt gvhsvsgsfd nngeirgnat flhnsftnag
      961 tlapgespgt lafasefant gtllveiggt taitgydqfq sgpftaggti tvsfingftp
     1021 algdafilld agiitgtfat vnlpdiapli wettytdgkf tiraiidpmp vtlvdfkask
     1081 nesavelawt tssevnsshf eiqrsaegkv wekvgsvatr nenseiqryr fidplplhad
     1141 nfyrlrmvdt dstfafskie hvrfadskgq vkgypnpvtd rvfldaptag tiqsvqiyst
     1201 sgllhyagey tsagidvkal ptgifilkat gadnrvstfh fakh
//
LOCUS       WP_235159025             323 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase [Dyadobacter sp. CY351].
ACCESSION   WP_235159025
VERSION     WP_235159025.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 323)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 323)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..323
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=35129
     Region          5..306
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     Site            order(22..24,56,61,86,128,158..159,178,206..212,261,
                     278..281,286,289..290)
                     /site_type="active"
                     /db_xref="CDD:381296"
     Site            order(56,61,86,128)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381296"
ORIGIN      
        1 mknikkiqlg qngpfvsklg lgcmrmssvw ggptpdetes iatihealds ginflntgdf
       61 ygaghnemli gkavkgrrdd afisvkfgai fhngqwlgmd lrpiaiknfi nysltrlgie
      121 tidlyqpsrm ddsvpvedii gtvadlvkeg kvrhigvsei sadqlrkann thpisaleig
      181 yslaerqiet ellptakelg igvvafasta eglltgdlka plaaddyrnh fsrfqgenlv
      241 hnlqkvevlk qlasdkgctp tqlaiawvng qgdhmmplvs msrrsrlpen maamdivfss
      301 eemntlnttf aigailggty lqr
//
LOCUS       WP_235159046             577 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Dyadobacter sp. CY351].
ACCESSION   WP_235159046
VERSION     WP_235159046.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 577)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 577)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 577)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 577)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..577
                     /product="ATP-binding protein"
                     /calculated_mol_wt=64040
     Region          39..>290
                     /region_name="NarQ"
                     /note="Signal transduction histidine kinase NarQ,
                     nitrate/nitrite-specific [Signal transduction mechanisms];
                     COG3850"
                     /db_xref="CDD:443059"
     Region          171..213
                     /region_name="HAMP"
                     /note="Histidine kinase, Adenylyl cyclase,
                     Methyl-accepting protein, and Phosphatase (HAMP) domain;
                     cd06225"
                     /db_xref="CDD:381743"
     Region          252..574
                     /region_name="WalK"
                     /note="Sensor histidine kinase WalK [Signal transduction
                     mechanisms]; COG5002"
                     /db_xref="CDD:444026"
ORIGIN      
        1 mkiktklrlg lgvlflmila lsviaagyiy tlkedtenil qdnyktldys rsmflaldqi
       61 hqgpeagarf eqnlkeqrsn vtepgegevt nkiaghydsl kkdlnnpqmp vlirndlael
      121 trvnmeaira ksdkaldtvh safiwialtg tvcflialtl lvnlpgnvgn pireltesir
      181 aiaaknyaer lhfsgkdefg elassfntma ekleeydnsn lsqilvekkr iealinnmhe
      241 pvigldenkk vlfaneeavk itgiavsdll gksaielaeq ndliraliee keglhansan
      301 aavpslkiya dnkesyfeke ivditivptg erlkkfigqv illknitpfk eldfaktnfi
      361 atvshelktp iasikmslql lesqhtgdln eeqkqlmssi kedsdrllki tgellnmsqv
      421 etgniqlniq ssspyailky avdavktpie qkrielvvqa ehqladvkad mektawvlin
      481 fltnavrysq edskihiqlt ptqqgvkflv rdegkgidsr yrtkifdryf qvpgssktgt
      541 glglaiskef ieaqggsigv tseigmgssf yfelasa
//
LOCUS       WP_235159105             408 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4374 domain-containing protein [Dyadobacter sp. CY351].
ACCESSION   WP_235159105
VERSION     WP_235159105.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14298.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..408
                     /product="DUF4374 domain-containing protein"
                     /calculated_mol_wt=44332
     Region          <252..391
                     /region_name="DUF4374"
                     /note="Domain of unknown function (DUF4374); pfam14298"
                     /db_xref="CDD:433849"
ORIGIN      
        1 mskffslpvk tlmvalaafv lngcsddpgg napveeagky savvcvgswp ntayyiadvp
       61 sltsgqislq gngaemtgkv yaqdiiqrng fyyhanagsg rfgkyhvekg alvvdkevpf
      121 thldwssfvw iddatlvvfg sgenaagvne aryaivkvvd msvtlgklaf qafpsktmdg
      181 faigfaeyrd gkifvgysfa tsdfskwpvv esiqnfnvav vnasdmaves nifesrssvp
      241 ggpivyapvs fqdesgdiyf itdpvynydy kshsavyrik kgattldnsy yldfsaktsn
      301 gmgaamwyig ngkaivrtrv agesidaehs fsiidakngt flkkldlpad kgermvnavv
      361 reddkvyiav naadkdyiwe ydtatekltp gaefvggidy ilrlektk
//
LOCUS       WP_235159121             281 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: chromate resistance protein ChrB domain-containing
            protein [Dyadobacter].
ACCESSION   WP_235159121
VERSION     WP_235159121.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
REFERENCE   1  (residues 1 to 281)
  AUTHORS   Branco,R. and Morais,P.V.
  TITLE     Identification and characterization of the transcriptional
            regulator ChrB in the chromate resistance determinant of
            Ochrobactrum tritici 5bvl1
  JOURNAL   PLoS One 8 (11), e77987 (2013)
   PUBMED   24223748
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 281)
  AUTHORS   Juhnke,S., Peitzsch,N., Hubener,N., Grosse,C. and Nies,D.H.
  TITLE     New genes involved in chromate resistance in Ralstonia
            metallidurans strain CH34
  JOURNAL   Arch Microbiol 179 (1), 15-25 (2002)
   PUBMED   12471500
  REMARK    Erratum:[Arch Microbiol. 2004 May;181(5):390]
REFERENCE   3  (residues 1 to 281)
  AUTHORS   Nies,A., Nies,D.H. and Silver,S.
  TITLE     Nucleotide sequence and expression of a plasmid-encoded chromate
            resistance determinant from Alcaligenes eutrophus
  JOURNAL   J Biol Chem 265 (10), 5648-5653 (1990)
   PUBMED   2180932
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021357.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09828.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..281
                     /product="chromate resistance protein ChrB
                     domain-containing protein"
                     /calculated_mol_wt=32472
     Region          <1..148
                     /region_name="ChrB1"
                     /note="Chromate resistance protein ChrB1 [Inorganic ion
                     transport and metabolism]; COG4275"
                     /db_xref="CDD:443416"
     Region          <190..278
                     /region_name="AraC"
                     /note="AraC-type DNA-binding domain and AraC-containing
                     proteins [Transcription]; COG2207"
                     /db_xref="CDD:441809"
ORIGIN      
        1 mkwitrerpk idriacpwli krfidpdaqi fffpfdqvka kaaelgatpf dipdtefthy
       61 edrctfdffl eryeiedpal kdmaviirga dtddhslaaq ssglwaisag layninddqe
      121 llekgmliyd alyswathlq kqkhtqnpte klllavfnty ldkqksehlk tpkwakelke
      181 iiqdqidtnl slslkeiseg lqihpsyvsr efskyfsnls fgeyirklri ekavdllanp
      241 dhtlseiayl tgfsdqshfn rifkaqtgqn psdfrknlpk k
//
LOCUS       WP_235159170             185 aa            linear   BCT 02-MAR-2025
DEFINITION  DoxX family membrane protein [Dyadobacter sp. CY351].
ACCESSION   WP_235159170
VERSION     WP_235159170.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 185)
  AUTHORS   Muller,F.H., Bandeiras,T.M., Urich,T., Teixeira,M., Gomes,C.M. and
            Kletzin,A.
  TITLE     Coupling of the pathway of sulphur oxidation to dioxygen reduction:
            characterization of a novel membrane-bound thiosulphate:quinone
            oxidoreductase
  JOURNAL   Mol Microbiol 53 (4), 1147-1160 (2004)
   PUBMED   15306018
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07681.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..185
                     /product="DoxX family membrane protein"
                     /calculated_mol_wt=20159
     Region          1..150
                     /region_name="DUF417"
                     /note="Protein of unknown function, DUF417; cl01162"
                     /db_xref="CDD:470100"
ORIGIN      
        1 mknslslfdr fdkldtsink wlvansinil rftmgivfva fgvlkfftgi spieslatrt
       61 tseltlgvft ghsamvfvat lecligfcfl tgmflrvgvw llalqmvgam splflypsel
      121 fsgtmhaptl eaqyiikdii liaagmvias twtgarivar pqgfratlsk rvagvyrdvs
      181 tvpya
//
LOCUS       WP_235159203             233 aa            linear   BCT 02-MAR-2025
DEFINITION  M12 family metallopeptidase [Dyadobacter sp. CY351].
ACCESSION   WP_235159203
VERSION     WP_235159203.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 233)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013559.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01400.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..233
                     /product="M12 family metallopeptidase"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=26190
     Region          109..>210
                     /region_name="ZnMc"
                     /note="Zinc-dependent metalloprotease. This super-family
                     of metalloproteases contains two major branches, the
                     astacin-like proteases and the adamalysin/reprolysin-like
                     proteases. Both branches have wide phylogenetic
                     distribution, and contain sub-families, which...; cl00064"
                     /db_xref="CDD:469599"
     Site            order(185..186,189,195)
                     /site_type="active"
                     /db_xref="CDD:239807"
ORIGIN      
        1 mktilfasrs civiamlifs scselreekv lstalktgpe kyipelaypg itgiekkgkl
       61 fgeeityhqi dgeavfegdi ilskeqlnee aglrtqaagv pskarrwtng ivpytidksl
      121 tnasdiykam ihieyytpir fvqrsnqnny vtfknshgfs ssigmsggqq fvnlglafny
      181 ggvlheicht lglfhehnrd drdqtitvhy gypgfrltqv llyrskrslr qrs
//
LOCUS       WP_235159219             767 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1549 domain-containing protein [Dyadobacter sp. CY351].
ACCESSION   WP_235159219
VERSION     WP_235159219.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019219.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07583.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..767
                     /product="DUF1549 domain-containing protein"
                     /calculated_mol_wt=86018
     Region          1..131
                     /region_name="COG4244"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:443386"
     Region          171..227
                     /region_name="PSCyt1"
                     /note="Planctomycete cytochrome C; pfam07635"
                     /db_xref="CDD:429568"
     Region          283..472
                     /region_name="PSCyt2"
                     /note="Protein of unknown function (DUF1549); pfam07583"
                     /db_xref="CDD:429550"
     Region          508..741
                     /region_name="PSD1"
                     /note="Protein of unknown function (DUF1553); pfam07587"
                     /db_xref="CDD:429553"
ORIGIN      
        1 mmvhfpigll fvalilelid wkrksarlrd avnimtwigv asaalsvtfg lllsdaeqsq
       61 getfeihrwa gfitlglail atislrnanr nvyrsllfvt vfgvslaghy gamithgddy
      121 ltsvmpssve peqeqsnedp adfvltnnga lnpqqvqdln vevrtilahn cyschgeaks
      181 kgdlrldskd aimkggengv vvvpdhpdks eiirrislpk gdkeamptkg krltereikv
      241 lkywvekgal wpdgkqksiy rvaaleprmp vlpaasgdiv lpvdrlvnay fqknkiswkp
      301 avndriyirr vyldiigllp ppekveafva derpdkrell akellnrsdd yaqhwmsfwn
      361 dalrndysgt gyitggrfdi tkwlysslqv nkpynwfvke lispvkgseg fikgikwrgt
      421 inssqrtemq aaqnvsqifl glnlkcasch dsfisdwkla dsyafanifa dtlleinrcd
      481 kptgtiagtk mlfpelgeis vnastekrlr eladflvqpk dgrlyrtavn rvwaqllgrg
      541 ivepvdmmdn mpwsedlldw lssdfvangy dmkkliytiv tsrtyqlpss svkeaadima
      601 ndykftgmvr rrltaeqfsd aistafnpmy adsaivykll pkdikkrlpf araafvkndp
      661 fqtslgrpnr etvstsrtsq anllqalelt ngskftntlk egskiwkeky ptsdslvtal
      721 yqnalgrtpl akelaaakri lgpapneesi qdlvwaialv pefqliy
//
LOCUS       WP_235159228             843 aa            linear   BCT 02-MAR-2025
DEFINITION  LysM peptidoglycan-binding domain-containing protein [Dyadobacter
            sp. CY351].
ACCESSION   WP_235159228
VERSION     WP_235159228.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 843)
  AUTHORS   Bateman,A. and Bycroft,M.
  TITLE     The structure of a LysM domain from E. coli membrane-bound lytic
            murein transglycosylase D (MltD)
  JOURNAL   J Mol Biol 299 (4), 1113-1119 (2000)
   PUBMED   10843862
REFERENCE   2  (residues 1 to 843)
  AUTHORS   Joris,B., Englebert,S., Chu,C.P., Kariyama,R., Daneo-Moore,L.,
            Shockman,G.D. and Ghuysen,J.M.
  TITLE     Modular design of the Enterococcus hirae muramidase-2 and
            Streptococcus faecalis autolysin
  JOURNAL   FEMS Microbiol Lett 70 (3), 257-264 (1992)
   PUBMED   1352512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01476.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..843
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=92011
     Region          50..429
                     /region_name="mltD"
                     /note="membrane-bound lytic murein transglycosylase D;
                     Provisional; PRK10783"
                     /db_xref="CDD:182727"
     Region          82..206
                     /region_name="MltD-like"
                     /note="Membrane-bound lytic murein transglycosylase D and
                     similar proteins; cd16894"
                     /db_xref="CDD:381615"
     Site            order(98,116..118,121,149,167..168)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:381615"
     Region          520..671
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
     Region          <621..840
                     /region_name="PRK06347"
                     /note="1,4-beta-N-acetylmuramoylhydrolase"
                     /db_xref="CDD:180536"
     Region          <769..842
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
ORIGIN      
        1 mnnikyitva wmllliansn viaqaypeip ssisfgginv kldrsaqdii eedvknlmsn
       61 kkfweekmdr avlhfpiveg ilmdeevpid fkylavqess frpdvvsssn avgywqfkpe
      121 tarelnlrvd ndvderknis asthaaawyl kknnqqfnnw vttlysyyqg aggvkkvvpa
      181 dwayarevtl tgktdrymlr ffahkialea giekyktank lvlleadygk gktlddisas
      241 lgvssadlks fnrwltddki pndrqylvti pvpadqlasv reklslppqq tavasvyedt
      301 gypvlkkmpa nssdpngpdl yeinglagaq araddkpktl akagrmsapk fmrfndmvae
      361 mqlipgqvyy lakkhkkast pfhtarpgdt whsvsqqygi rlvsllkynr ttsrnypiqt
      421 gqvlfltkkr pkkqpieiia ppqpspgkkd sviakkedvi aaapaantnv ipdkpsgrkk
      481 ytpvlvekke etasapaian ppvtnapvaa atpaaaniqt nptvktatnv pasvptepvs
      541 qqagdrvvii tqdnadtsfk saeerpvats sspskvvtpn dtratsetsv ymkqraaaee
      601 raareaaaep ktaapekpaa tekasfhtvq sgdtyfsias kynltlreli alnkntpgrl
      661 vvgqrlnvsk gapaetasaa pataaptret pakttqepek itvvrtepae tfktpeeikh
      721 etrtatssgs eyhvvqggqt yysiskaygl svkelydlnd lngasplksg qrlrvrrtas
      781 eapaaapspg srssgtqtht vaagetlfri sqtyhtnved ikrlnnmsgn svmvgqklki
      841 pqq
//
LOCUS       WP_235159285             348 aa            linear   BCT 02-MAR-2025
DEFINITION  LiaF transmembrane domain-containing protein [Dyadobacter sp.
            CY351].
ACCESSION   WP_235159285
VERSION     WP_235159285.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046770.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22570.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..348
                     /product="LiaF transmembrane domain-containing protein"
                     /calculated_mol_wt=38847
     Region          7..51
                     /region_name="DUF5668"
                     /note="Domain of unknown function (DUF5668); pfam18917"
                     /db_xref="CDD:465909"
ORIGIN      
        1 mknsrgivwg gllvifgmlw llrnmnllnv nwdeilpywp vlliiagall iakgnedrgl
       61 ggligllitl avfggivnkt dkafdrhadn wdwnwndddd ddrnfgyndn dnndhendnd
      121 edrdedyend rdnrdgkkpi ngnykyemed fiqkanfhle ggagsftlng ntqklfeakt
      181 kstfvgflsn tsinkldnsa tvnltmeegn vkikegeisn qanihlnerp vwnidlgiga
      241 gkgdfdfsny kveklkvstg vadmdikmgd kmttsnidie agvasvtlel prsvgcemrm
      301 dgalnaknmd dldkisngly rspdfesask kiiihfeggl tsvnikry
//
LOCUS       WP_235159396             455 aa            linear   BCT 02-MAR-2025
DEFINITION  OmpA family protein [Dyadobacter sp. CY351].
ACCESSION   WP_235159396
VERSION     WP_235159396.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012894.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00691.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..455
                     /product="OmpA family protein"
                     /calculated_mol_wt=51498
     Region          67..210
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          194..449
                     /region_name="OmpA"
                     /note="Outer membrane protein OmpA and related
                     peptidoglycan-associated (lipo)proteins [Cell
                     wall/membrane/envelope biogenesis]; COG2885"
                     /db_xref="CDD:442131"
     Region          347..449
                     /region_name="OmpA_C-like"
                     /note="Peptidoglycan binding domains similar to the
                     C-terminal domain of outer-membrane protein OmpA; cd07185"
                     /db_xref="CDD:143586"
     Site            order(352..353,386..387,390,394..395,398,440,444)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:143586"
ORIGIN      
        1 mlvilltgly fpsfsqshwt ydfnngltpi enagpslkvl gqpgkyvkek ipgsddlsrt
       61 iyqfeknsgl qfnnaeakgf lsksftvevy fkmdeldswk rvldfknrks dygsyiydgk
      121 lnfydfaige kapvranqyv hyvysrdfet kiikmyingq sklefkdpgt egmldndqvl
      181 nffqddlian hessagsivl irvydrvmtp vfvrrsyqti srapkaavae keeekqpeek
      241 pavkepakrn tnlavvtgrv ydgknlkpvn dadvtvrksn sdslvastkt vngiynfelr
      301 pyetyrisaq aegfqsksvs vkvsnrfeev kslislsest ydtplstlyf tqstdvledd
      361 alrgldslvs yfqkrdnlri vlkghtdntg dfaknlelsn mrvatvksyl lgkgidenri
      421 sgsgygsaqp srmnqtealk rsnrrveiwa epikr
//
LOCUS       WP_235159400             309 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Dyadobacter sp. CY351].
ACCESSION   WP_235159400
VERSION     WP_235159400.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 309)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..309
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=33880
     Region          32..295
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mknylfffcf vcqsafaqlp apdqlskhvy klasdkmqgr gtgskenqka agyvaaqfkk
       61 yklqpkgtng fyqpftakvr rvvvtdslre tnnvigfldn gaantiviga hfdhlglgrq
      121 gsskaekpeg qihngaddna sgvagllela ryfskndvke pynflfiafg aeelgllgsr
      181 hfvnnptlpl ekinfmtnmd migrydasrg vgiggygtsd awpdifkdvk sdtkfftdka
      241 gsggsdhgsf yakkipvlff htgghddyhk ptddpekidy naaagilrih iqlienamkl
      301 pkltfttvi
//
LOCUS       WP_235159484             302 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase [Dyadobacter sp. CY351].
ACCESSION   WP_235159484
VERSION     WP_235159484.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 302)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..302
                     /product="PfkB family carbohydrate kinase"
                     /calculated_mol_wt=33303
     Region          4..269
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
     Site            order(31,235,238)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238177"
     Site            order(174,205,233,236..237,240)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238177"
ORIGIN      
        1 mydictighi tldkvvtaqs vkfmpggtsf yfskalrqfd vdymlvtala ekenhilsal
       61 reeniqifsq pseftvyfen iysanqdhre qnvlhkaapf ttaqmpdiea rifhlgplls
      121 dditvdllks laakgmvsld iqgylryvkd qkvlykdwad kkealphvsi lkanefemev
      181 vtgtsdvrkg aayladlgvk eviitlgskg sliyvdndff ripaykptai vdatgcgdty
      241 magylskriq gagvqeagef gaamatlkiq ssgpfsgnaa mveevlqyge cdremiaqai
      301 yq
//
LOCUS       WP_235159488             409 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: Pycsar system effector family protein [Dyadobacter].
ACCESSION   WP_235159488
VERSION     WP_235159488.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
REFERENCE   1  (residues 1 to 409)
  AUTHORS   Tal,N., Morehouse,B.R., Millman,A., Stokar-Avihail,A., Avraham,C.,
            Fedorenko,T., Yirmiya,E., Herbst,E., Brandis,A., Mehlman,T.,
            Oppenheimer-Shaanan,Y., Keszei,A.F.A., Shao,S., Amitai,G.,
            Kranzusch,P.J. and Sorek,R.
  TITLE     Cyclic CMP and cyclic UMP mediate bacterial immunity against phages
  JOURNAL   Cell 184 (23), 5728-5739 (2021)
   PUBMED   34644530
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040152.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18967.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..409
                     /product="Pycsar system effector family protein"
                     /calculated_mol_wt=46783
     Region          8..196
                     /region_name="COG4339"
                     /note="Predicted metal-dependent phosphohydrolase, HD
                     superfamily [General function prediction only]"
                     /db_xref="CDD:443480"
     Region          281..392
                     /region_name="DUF5706"
                     /note="Family of unknown function (DUF5706); pfam18967"
                     /db_xref="CDD:465934"
ORIGIN      
        1 mnynhrldkv rhyvhhffgt kelaqlsyhn lvhteavvsn avkianhyrl edketfivvt
       61 aawfhdtgys tgdaagheqr gaalaaeflr seevdesvia evegcilati wpqnpknflq
      121 qvvcdadlfh fgtpefsdwn klvrkeaeqr agkkmdkaqw rkstialles htfqtdycrd
      181 mldkqkrkni eklkekgles lpaaeepvie tvadtftpat apeitdlrki kndrpdkgie
      241 tmfrissnnh qrlsdmadnk ahimitttsi iisvllsvli rkledntyli iptmllltic
      301 mitmvfsils trptiphgtf tqedidtknv nllffgnfyr msyndysngm qrmmndrefl
      361 ygsltkdvys qgvvlgrkyr llriaynvfm fgivvsviaf vfasalfeh
//
LOCUS       WP_235159490             284 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: SdiA-regulated domain-containing protein
            [Dyadobacter].
ACCESSION   WP_235159490
VERSION     WP_235159490.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
REFERENCE   1  (residues 1 to 284)
  AUTHORS   Ahmer,B.M., van Reeuwijk,J., Timmers,C.D., Valentine,P.J. and
            Heffron,F.
  TITLE     Salmonella typhimurium encodes an SdiA homolog, a putative quorum
            sensor of the LuxR family, that regulates genes on the virulence
            plasmid
  JOURNAL   J Bacteriol 180 (5), 1185-1193 (1998)
   PUBMED   9495757
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018659.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06977.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..284
                     /product="SdiA-regulated domain-containing protein"
                     /calculated_mol_wt=31974
     Region          1..284
                     /region_name="YjiK"
                     /note="Uncharacterized Ca-binding beta-propeller protein
                     YjiK [General function prediction only]; COG3204"
                     /db_xref="CDD:442437"
ORIGIN      
        1 matflqhigm lalltlggcd stkkeqvvyk dydlgkpdkf nmpeslfeis gitlnqgnpd
       61 tiyaiqdedg rlyrlgwdep kqlnakfskk gdyedvtiir nnvyvlksng aiynfpltea
      121 vfeeveqire mkkilpkgey egmfgdeasg kiyilcknce qdnskssvtg yilepdkdsa
      181 kisetfsiqv deikaitgkv ergfrpsgla knpvtndwyi isavnkllvv tdnqwkvkea
      241 yalngnqfiq pegiifdkqg nlyisnegdd lfsgnilkfk kknr
//
LOCUS       WP_235159491            1262 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Dyadobacter sp. CY351].
ACCESSION   WP_235159491
VERSION     WP_235159491.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 1262)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1262
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..1262
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=143400
     Region          86..391
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Region          <1010..1262
                     /region_name="BamA"
                     /note="Outer membrane protein assembly factor BamA [Cell
                     wall/membrane/envelope biogenesis]; COG4775"
                     /db_xref="CDD:443807"
ORIGIN      
        1 mkrvlrvipf fvllvgvfsc asyktqfske avnwerdaps pdlvlkhtmy ligdagndsp
       61 esrapvleyl kkkleteskh ssalflgdni yehgmppsed sadrkvaefr iisqletldn
      121 frgtpiflpg nhdwrgwgvk glkrqekfvd kyinekrgvs nkedyqsyfl pldgcsgpev
      181 ielndnvvvi vvdsqwwltd wdkdskindg ceiknreqfr fvfenvvrky rnkqvvfamh
      241 hppytygphg grftikqhif pltelnpdlw iplpvlgsis aifratigsk qdvankhykd
      301 lrtavmagak kngkfifasg hehalqfien dnqefivsgs gsknspvslg kgsqfassrl
      361 gystinfyeg geawtnfwev tadgkeaklv frkkikdkqa velpdstiaf teynqhndst
      421 sryvtsnevk pvggfhrfll gqhnrdlyve kytfpvldln tfkggvtpvk qgggnqtnsl
      481 rlrdkdgkey alrgltkdvs rflpfpfnqm vaakylvedn flstnpfapl cmpvladavq
      541 vyhtnpklyy vpaqpglaty nalfggtmnl leerpdgkrw kqaaffgnpd kivstpelve
      601 sllengknkv deawairtrl fdfivgdwdr hddqwawssv kqqdgttlyr piprdrdqaf
      661 smydglltgv arltlpflrq lqsfspeiqs mkwttwsarl fdrtfltrlt weqweeqakf
      721 iqtnltdevi nnafaswpee arqksaaali qnmksrrdkl liiarthyef vsenvnvigt
      781 eeeervvver lderrtkvsv yetgkdgrik hlnyervfna dvtrtinvyg ngdddefivk
      841 gdagkgikvr ligglgtdvf tdstgtsagk kktliyddlr nntvvagadt kdkrtnlyry
      901 nvydrrsads nydiaipapi lgvnpddgll lgasatwmky gfkkepyasl hafgasyafa
      961 tkgfkvnytg dfinafkkfd fyldtyyhgp tyafnyaglg ndterlvndp dfyrvrqsfl
     1021 hiypalkkrf agtagfitlg ptfelsdiqp tggrfitsae nelsddvfet kmfaggkfqf
     1081 dfnsvdnifa phtgirfnag lnwttnlenk nnfgsfrarf ayytsldare niilatqvgt
     1141 glifgdsyef fqmptlggkq glrghrterf yghssiwhdt dlrirlgssy nptlpltygv
     1201 fgsfdygrvw lddeeskslh ynygggvwfa pvdiltlavg afipkekkee kpriafqigf
     1261 wf
//
LOCUS       WP_235159525             957 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Dyadobacter sp.
            CY351].
ACCESSION   WP_235159525
VERSION     WP_235159525.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 957)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..957
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=104985
     Region          27..120
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
     Region          115..>708
                     /region_name="CirA"
                     /note="Outer membrane receptor protein, Fe transport
                     [Inorganic ion transport and metabolism]; COG1629"
                     /db_xref="CDD:441236"
     Region          452..922
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mkkfasllsl lilfslsafa qdptgritgv vkdsvtnepv vgayvavsrn lpdakpeyvt
       61 tdidgkfsfs glakqavylv kvsylsykda srtvtvqddt qdvgtfqlse avanlkeikv
      121 vgqvtavqqk gdttqfnaaa yktnpdatse dliqkmpgit vangtvtang etvnrvlvdg
      181 kpffgedaal tlkslpaeiv dkievfdkls dqaqftgfdd gngqktiniv tkadrkmgqf
      241 gkvfagygld nryqaggnvs ffkgdqrisv iglsnninmq nfssqdligv sggggggrgg
      301 sgggsagnfl vgnqsgitgt nsfglnyank fgkkvdvtgs yffnrtgnsn lqsmqqrfil
      361 pgdtdstdqi ynensrtnnt nanhrlnfri eyninknnsl ivtprlsfqd nnsastkagl
      421 ntlnglrins ldnsqrnatn aynfnndvlf rhsfekkgrt lsvnlntqln drnglgnlys
      481 ktmffdslgl aargdtldqe sytysngltl ggnliytepi gknsqlqfny gltvsnsdsk
      541 ketynmsfde ntysdldsll sntfdnryvt nragigyryr knswsanfgl dfqntglysq
      601 qlapvnakvd qsftnllpnf mlsyrsktgt qfrtffrsst nqpsisqlqn vidnsnplal
      661 tagnpdlkqe yrnsfnirys lagaerpynl namvfvtqtn naivnstlia qeptkivdgi
      721 ilergakftk pvnvdgswna rtflaygkpi aplklnvnlt tgfnyvrspg linnisnysn
      781 tyavsqglvv ssnvsenldf tvsysgnynm vrntiqpnln nnyytqgitg rvnwifgkgf
      841 vvqsdvsnqs yrglgegynr nftlwnasig kkflknnage lkltvfdilk qnnsitrnvt
      901 etyvqdvtnr vltqyamltf tytlrnfgka papqnnrrrd fesgdmpggg rgarggf
//
LOCUS       WP_235159534             486 aa            linear   BCT 02-MAR-2025
DEFINITION  arginine deiminase family protein [Dyadobacter sp. CY351].
ACCESSION   WP_235159534
VERSION     WP_235159534.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 486)
  AUTHORS   Shirai,H. and Mizuguchi,K.
  TITLE     Prediction of the structure and function of AstA and AstB, the
            first two enzymes of the arginine succinyltransferase pathway of
            arginine catabolism
  JOURNAL   FEBS Lett 555 (3), 505-510 (2003)
   PUBMED   14675764
REFERENCE   2  (residues 1 to 486)
  AUTHORS   Shirai,H., Blundell,T.L. and Mizuguchi,K.
  TITLE     A novel superfamily of enzymes that catalyze the modification of
            guanidino groups
  JOURNAL   Trends Biochem Sci 26 (8), 465-468 (2001)
   PUBMED   11504612
REFERENCE   3  (residues 1 to 486)
  AUTHORS   D'Hooghe,I., Vander Wauven,C., Michiels,J., Tricot,C., de Wilde,P.,
            Vanderleyden,J. and Stalon,V.
  TITLE     The arginine deiminase pathway in Rhizobium etli: DNA sequence
            analysis and functional study of the arcABC genes
  JOURNAL   J Bacteriol 179 (23), 7403-7409 (1997)
   PUBMED   9393705
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014344.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02274.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..486
                     /product="arginine deiminase family protein"
                     /calculated_mol_wt=55319
     Region          9..482
                     /region_name="ArcA"
                     /note="Arginine deiminase [Amino acid transport and
                     metabolism]; COG2235"
                     /db_xref="CDD:441836"
ORIGIN      
        1 mhteiiagta invasetgtl krllihspdr glgkvvpska qdwlfedivh ldtmrrgeyd
       61 yyvklllyfl dpekikgrla didsdptrsf fipgsekyfn sdcvvdiqkl lgeilengev
      121 rvkltaaicg iercsyhtqe elnqydphel akifisgsys dkrmlfaplp nlifmrdigi
      181 vindhillnk paknartres ilaqfvffyh pmfadirsri ieipenerhf llpddekasd
      241 yhrctleggd vmmvapnhlv igssertsly aaqqvmkllf ekevvtkiti vkipkkrdym
      301 hidtiftqvk knvwvllgsl arlgdeakkq dvlhffgpqd tnkefrilqf vkgeehnpte
      361 ienledllas isvndlgvte pvrfiysgdn efpygereqw tdscnllalk dgvvvgydrn
      421 dktldafrkh gyqvisakdl iqkleddels vetltdtfit lpsaelsrar ggshcmsmpi
      481 lrsatr
//
LOCUS       WP_235159572             227 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2490 domain-containing protein [Dyadobacter sp. CY351].
ACCESSION   WP_235159572
VERSION     WP_235159572.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022142.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10677.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..227
                     /product="DUF2490 domain-containing protein"
                     /calculated_mol_wt=26053
     Region          26..204
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 myryalnclf lvmlplavlg qrnfrtgtlp qinvninlap gwklntklea rqifferepe
       61 talsrrlrye rtdlstvitk kisadntvga gylarwdgne fthrliqqfs nvqnlevisl
      121 ahrvvtdetf spsespefra ryrlglelpl sgrqidpref yskvnneylg iwsegdadle
      181 irgllalgyn atdnnkielg veyrvnefdn pskaqqfwlt igwfvsi
//
LOCUS       WP_235159578             438 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4270 family protein [Dyadobacter sp. CY351].
ACCESSION   WP_235159578
VERSION     WP_235159578.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025458.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14092.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..438
                     /product="DUF4270 family protein"
                     /calculated_mol_wt=47869
     Region          15..433
                     /region_name="DUF4270"
                     /note="Domain of unknown function (DUF4270); pfam14092"
                     /db_xref="CDD:433711"
ORIGIN      
        1 msgceptgdq ieaivqpnvd dfsvvfsdta svslssvgtd svftggpgrl llgrnidpyf
       61 gkfqatpffq ptiqtalvvp elavydslvl slrydnytyg dttiamniav hkllanmldk
      121 nayyntdatp yeatplgkvk vvptprssgr iriklsdvlg kqifsmsknn qlpsntewid
      181 lvkglvlvpg ssdngplvgf rlfddhtsiq lhyhlteddg vkrdstiiks gigynqilsd
      241 rkgtqlvklp ntkrislpse qsgnmsfvqa glgvmtrvdf ptimdlkinp ytvvnkaflh
      301 vtplagsvtn fyrapdtlya ylvdknneyf qgstgfpepa rtlagtpvfg kyqvdllnnt
      361 afylfdvggy issvlaagge nttglifrts pfntsetaaq ptydteftks aqrlvignqr
      421 qsnkgvklql yytsvntr
//
LOCUS       WP_235159593              88 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Dyadobacter sp. CY351].
ACCESSION   WP_235159593
VERSION     WP_235159593.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017416.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05598.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..88
                     /product="transposase"
                     /calculated_mol_wt=10223
     Region          1..>85
                     /region_name="COG3666"
                     /note="Transposase, IS1182 family [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:442883"
ORIGIN      
        1 mlqlsdrvpk dnfyrglres ldlnsiykdt relygstgnp sidpvvfrpa arfrlmltgy
       61 lenitsdrkl vehcsmrmdi lylfgiry
//
LOCUS       WP_235159631             245 aa            linear   BCT 02-MAR-2025
DEFINITION  L,D-transpeptidase family protein [Dyadobacter sp. CY351].
ACCESSION   WP_235159631
VERSION     WP_235159631.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 245)
  AUTHORS   Biarrotte-Sorin,S., Hugonnet,J.E., Delfosse,V., Mainardi,J.L.,
            Gutmann,L., Arthur,M. and Mayer,C.
  TITLE     Crystal structure of a novel beta-lactam-insensitive peptidoglycan
            transpeptidase
  JOURNAL   J Mol Biol 359 (3), 533-538 (2006)
   PUBMED   16647082
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015679.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03734.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..245
                     /product="L,D-transpeptidase family protein"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=27525
     Region          <94..234
                     /region_name="YcbB"
                     /note="Murein L,D-transpeptidase YcbB/YkuD [Cell
                     wall/membrane/envelope biogenesis]; COG2989"
                     /db_xref="CDD:442228"
ORIGIN      
        1 mrslaliltl llascanqsl iaqgysswky arltaagmdt lailsdsvel srtlymiayg
       61 spdkrfpnql lktidstkmg qvvgrilkdt sqwnlqvisp qgklispemi dwksltaknl
      121 pyrlrqstgc nnalgvikfd ldspydvylh dtnhrellsk kyrflghgci rvaepaklan
      181 flmekewlsd aftearyhnl psksyplpht ipvvitytlv eadaglvyyq diynalankp
      241 itftr
//
LOCUS       WP_235159666             243 aa            linear   BCT 02-MAR-2025
DEFINITION  outer membrane beta-barrel protein [Dyadobacter sp. CY351].
ACCESSION   WP_235159666
VERSION     WP_235159666.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024957.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13568.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..243
                     /product="outer membrane beta-barrel protein"
                     /calculated_mol_wt=26125
     Region          21..205
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mkkqliltav ffaffqiaar aqndmsifig gggggnlsty sytadyadty tsssakpgln
       61 ggfvfgmefg kmaivsgvnf iqkgtkaetd nyriendyvg flkarentsf isipllfryr
      121 ilgekiglia sagpsfnvav ggnsrlelev vgvgsrsqsg dinfgsgind tykrfqpgfm
      181 lgpgmlmpvs ekgklavnml fdlgfdavnk rnatarging kvmnvsailn vtythhfvfg
      241 dky
//
LOCUS       WP_235159668             252 aa            linear   BCT 02-MAR-2025
DEFINITION  MotA/TolQ/ExbB proton channel family protein [Dyadobacter sp.
            CY351].
ACCESSION   WP_235159668
VERSION     WP_235159668.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 252)
  AUTHORS   Braun,T.F., Poulson,S., Gully,J.B., Empey,J.C., Van Way,S.,
            Putnam,A. and Blair,D.F.
  TITLE     Function of proline residues of MotA in torque generation by the
            flagellar motor of Escherichia coli
  JOURNAL   J Bacteriol 181 (11), 3542-3551 (1999)
   PUBMED   10348868
REFERENCE   2  (residues 1 to 252)
  AUTHORS   Higgs,P.I., Myers,P.S. and Postle,K.
  TITLE     Interactions in the TonB-dependent energy transduction complex:
            ExbB and ExbD form homomultimers
  JOURNAL   J Bacteriol 180 (22), 6031-6038 (1998)
   PUBMED   9811664
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013760.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01618.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..252
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /calculated_mol_wt=28422
ORIGIN      
        1 mnskrlyhls vslivavsiw falillssls lshginrflq afggsfggfv haiiytafif
       61 gvleivsyrk firkqnegfg lnvlpvedql vlspdevari kmsvldlekh gfsfmltdfi
      121 kractqyrnn qsisetlqvl nvqidnskte legrleiarf linaiaslgf igtilhlags
      181 iglfhlakte egmplvtqsl niafdttfia lflglilsyf yhryleeidt fysrmkahii
      241 dnlisriykq qs
//
LOCUS       WP_235159671             206 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: response regulator [Dyadobacter].
ACCESSION   WP_235159671
VERSION     WP_235159671.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
REFERENCE   1  (residues 1 to 206)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..206
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=22280
     Region          2..206
                     /region_name="PRK15369"
                     /note="two component system response regulator"
                     /db_xref="CDD:185267"
ORIGIN      
        1 mkvfiiddhp ivldglrnll esreemevsg myqtgsavld alettvpdam lmdinlpdin
       61 gvtlchkikq kfpaakiial svhnertvim gmlqsgasgy vlknaigkdi italhaamdg
      121 qiylcqgtqa vlnssppsdq keiprltrre keilqligtg httqqiaaal fisthtvesh
      181 rknliekfga pntatvikia tdlglt
//
LOCUS       WP_235159707             265 aa            linear   BCT 02-MAR-2025
DEFINITION  6-hydroxymethylpterin diphosphokinase MptE-like protein
            [Dyadobacter sp. CY351].
ACCESSION   WP_235159707
VERSION     WP_235159707.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 265)
  AUTHORS   de Crecy-Lagard,V., Phillips,G., Grochowski,L.L., El Yacoubi,B.,
            Jenney,F., Adams,M.W., Murzin,A.G. and White,R.H.
  TITLE     Comparative genomics guided discovery of two missing archaeal
            enzyme families involved in the biosynthesis of the pterin moiety
            of tetrahydromethanopterin and tetrahydrofolate
  JOURNAL   ACS Chem Biol 7 (11), 1807-1816 (2012)
   PUBMED   22931285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014075.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01973.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..265
                     /product="6-hydroxymethylpterin diphosphokinase MptE-like
                     protein"
                     /calculated_mol_wt=30736
     Region          41..185
                     /region_name="TPK"
                     /note="Thiamine pyrophosphokinase; cl21552"
                     /db_xref="CDD:473909"
ORIGIN      
        1 mielerlnpt rlipgigrrl seiphsiawe sskkgianrk nlesfkgryk geklfliang
       61 pslkdmdlsv lkneytmcmn rfymyfdrln ftptfltcvq dlvleqfkdd feklecitff
      121 nwrfrnefsk aiflkesysi npffqtdltk atqiggtvtf aslqlayylg fkeviiigmd
      181 hsfaekgtpn klevrtheed kshfdpnyfp kgikwklpdl kkseysydla riafeqdgrk
      241 iidatvgghc mvfekgvlkd yltak
//
LOCUS       WP_235159776             719 aa            linear   BCT 02-MAR-2025
DEFINITION  FN3 associated domain-containing protein [Dyadobacter sp. CY351].
ACCESSION   WP_235159776
VERSION     WP_235159776.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024683.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13287.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..719
                     /product="FN3 associated domain-containing protein"
                     /calculated_mol_wt=80208
     Region          38..181
                     /region_name="COG4244"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:443386"
     Region          205..264
                     /region_name="PSCyt1"
                     /note="Planctomycete cytochrome C; pfam07635"
                     /db_xref="CDD:429568"
     Region          <359..>463
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          500..559
                     /region_name="Fn3_assoc"
                     /note="Fn3 associated; pfam13287"
                     /db_xref="CDD:463829"
ORIGIN      
        1 mrrfvsdwkg lifnaalfln gllvfllife srfavpfwmq avgrmhplvl hfplvvlily
       61 siwvvaierp dstrwnaeia dtllaigaft aavaafsgfv lsredgyesd tlqwhkwlgv
      121 aislmsigwy glrqylmpwk llsklvagif llvlfvgghl ggnlthgedf lisplgpsae
      181 erpkvaleqa evyehlvkpv leqkcischn qekskgnlqm qtqallvkgg ksgalwdttk
      241 adlgllisrl hlplddkkhm pprgkvqlte eevvllaawv kagsrfdqkv stlsgqdpiy
      301 ayaqntlggd rteeqydfsa adadevkkln styrliksls aespalyvnf ynsanftsee
      361 iagltplknq ivsmdlskmp lkdadlkslt qftelrklil nftditgatl gelkkleklr
      421 elslsgtavk mehvksletf pslkkvfiws tglttdelas lrkgqkiafe tgfrsdtvil
      481 plspptivne sqilaadglv slkhqipqtt irytldgsep dstqslvykk piqlsenkll
      541 karaykdgwy gskpvsrrff kasmkidsvr lvkpadqrya gkagatlidg vksedeqnsg
      601 kwlgynedfq gylyfkkpvq arrvtlsmlr nlngsifppt rievwggade nslkllkvit
      661 pqmpvkdipg vetilyeapf eqqqlscikv iakhlpklpa whsgkgnkaw vfvdevfvn
//
LOCUS       WP_235159807            1295 aa            linear   BCT 02-MAR-2025
DEFINITION  Eco57I restriction-modification methylase domain-containing protein
            [Dyadobacter sp. CY351].
ACCESSION   WP_235159807
VERSION     WP_235159807.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 1295)
  AUTHORS   Schluckebier,G., Kozak,M., Bleimling,N., Weinhold,E. and Saenger,W.
  TITLE     Differential binding of S-adenosylmethionine S-adenosylhomocysteine
            and Sinefungin to the adenine-specific DNA methyltransferase M.TaqI
  JOURNAL   J Mol Biol 265 (1), 56-67 (1997)
   PUBMED   8995524
REFERENCE   2  (residues 1 to 1295)
  AUTHORS   Janulaitis,A., Vaisvila,R., Timinskas,A., Klimasauskas,S. and
            Butkus,V.
  TITLE     Cloning and sequence analysis of the genes coding for Eco57I type
            IV restriction-modification enzymes
  JOURNAL   Nucleic Acids Res 20 (22), 6051-6056 (1992)
   PUBMED   1334261
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019291.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07669.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1295
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..1295
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=148453
     Region          <465..1262
                     /region_name="YeeA"
                     /note="Type II restriction/modification system,
                     endonuclease and methylase domains [Defense mechanisms];
                     COG1002"
                     /db_xref="CDD:440626"
ORIGIN      
        1 mnfpsidiqg silstdllak irgeqatfqq gkdfnadltn aklkdeisla wqdakgqwti
       61 yksklgrlke geagttetrn fwisplltnl gynltfnrqs eelngksfpi gfrdssldnf
      121 pvyvggyhes ldkrpenkql rvsphalvqe ylnysehlyg matngrqlrl lrdasritrl
      181 sylefnlekm meedlysdfv ilyrvlhasr mpkkidagae simekyhqeg leagstirnk
      241 lgeavkgaik nlangfinhp nnaalreava agnvntdeyy rhqlriiyrl lflfvieern
      301 liysdsktpe tkrfnqiyfn yysllrlrkl akklpppean rhydlwqslv stfslfeqke
      361 igeklgimsl qgdlfgyhai snsqydlhqc ylsnsvllni lkslsyfend ngvliavnyg
      421 gldveefgsv yegllelkle fnkvegsdny svnwqkqagg refqshytpe elvqplikhs
      481 leyliedill lytqkkvske stinallklk vcdvacgsgh illsaarria lavarmqtee
      541 eqpnplsirk amkdvvrnci ygvdknplav elckialwle aynpgeplnf ldhhikcgda
      601 ivglahrsel ekgiadeafk tltvdnkdia ktwrdknvke rkervakslq lkaefektte
      661 nsvqeamaey ktfnqlpett pdetkhkaka ykkfidgkgf tflkamadtq iaqffipktd
      721 ankeylmtda dfrlilsgyk gwqdrkvaka tavaleqrff hwfiefpevf neggfdcvlg
      781 nppflggkki sgnygddyls iikyyyfpve ggvdlvgyff rriyyiikne gfqslistnt
      841 iaqgdtkkas leyissksgt infaikstkw pgvatlevsl vcifkgnwkk kiflgstevi
      901 sitpflddnk snnenpfcly snqkksfqgt ivlgtgfild kdeattllkn smsnakvilp
      961 ylngddlnst sdatatrqii nfynweedyc kknyfdcyti vqnkvkpqrd ilkdkgyrek
     1021 wwqygrravd mydsiknktk viaiaqvtkp vafefvntnq vldaklivfd lhefnsfavl
     1081 qssmhnswcw nycttletrl syaptslfet fpfppninse qkwqletige ayhehrrqlm
     1141 mnmqlgltkt ynlfhcnait tqgindkdkq vaslqkhfek tantisfdea ikgilklrei
     1201 hvqmdeavld aygwndialk hdfyevdylp endrvrftih pdarkevlkr llelnhkihe
     1261 eevkaglwnk kktskkqpmp lskkelgyvs dllge
//
LOCUS       WP_235159827             451 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase [Dyadobacter sp. CY351].
ACCESSION   WP_235159827
VERSION     WP_235159827.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017773.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05990.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..451
                     /product="alpha/beta hydrolase"
                     /calculated_mol_wt=51453
     Region          <116..>257
                     /region_name="COG4782"
                     /note="Esterase/lipase superfamily enzyme [General
                     function prediction only]"
                     /db_xref="CDD:443812"
ORIGIN      
        1 migiikndlr petqkpkgkg ffekgnlvqi nggkfhddvl wyqvddgiei nsfevevdly
       61 sglperhqsq fyicyrklna qnapiesevs dapdklyfsh lsspsvkvnn wlpnifanav
      121 aqsvvgkaek dvfvyihgyd wqpglkldla arfvqsymnh pdstvakvly fgwpsyggrr
      181 daddrsiefg ksftqkglfr yfkllsealq kqgqslnliv hsyghqllng minpgegsrh
      241 llpgkifqni flmapdithl siqkngvllr npkktrkgrh yhydlsplkd lgarvhiyhn
      301 sadyllyvss kqsygidhvf fdnrpdsmgi ttdyrtlgny gkdifdeads vltleqgfnf
      361 vnvqqlvsea geaprnlaff pfrnntnsal aeawkgnyrn iktleglfkg dlllphhqyl
      421 ftckavvddv lrklrhdhre fqpeedrdii v
//
LOCUS       WP_235159641             217 aa            linear   BCT 02-MAR-2025
DEFINITION  carotenoid biosynthesis protein [Dyadobacter sp. CY351].
ACCESSION   WP_235159641
VERSION     WP_235159641.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 217)
  AUTHORS   Yang,Y., Yatsunami,R., Ando,A., Miyoko,N., Fukui,T., Takaichi,S.
            and Nakamura,S.
  TITLE     Complete biosynthetic pathway of the C50 carotenoid bacterioruberin
            from lycopene in the extremely halophilic archaeon Haloarcula
            japonica
  JOURNAL   J Bacteriol 197 (9), 1614-1623 (2015)
   PUBMED   25712483
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016155.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04240.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..217
                     /product="carotenoid biosynthesis protein"
                     /calculated_mol_wt=24496
     Region          8..>176
                     /region_name="Caroten_synth"
                     /note="Carotenoid biosynthesis protein; cl00991"
                     /db_xref="CDD:470023"
ORIGIN      
        1 mnnelsfsav ksntsifaiw lvtisgmigi wlgygawflp ktpfnlllgv allywnfplk
       61 nvwpgiliws lvyiigmgve migvntglvf gdywygenmg pklanvplli ginwvvltfi
      121 tatiakrfig npwmapvcga almvaldffi epvasvfdyw hwnvgyaplr nyidwfvvsl
      181 vlqvlvknyv pqakyplplh hfasqvlffv ffylisk
//
LOCUS       WP_235159838             130 aa            linear   BCT 02-MAR-2025
DEFINITION  type VI secretion system tube protein TssD [Dyadobacter sp. CY351].
ACCESSION   WP_235159838
VERSION     WP_235159838.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 130)
  AUTHORS   Coyne,M.J., Roelofs,K.G. and Comstock,L.E.
  TITLE     Type VI secretion systems of human gut Bacteroidales segregate into
            three genetic architectures, two of which are contained on mobile
            genetic elements
  JOURNAL   BMC Genomics 17, 58 (2016)
   PUBMED   26768901
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037603.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17642.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     gene            1..130
                     /gene="tssD"
     Protein         1..130
                     /product="type VI secretion system tube protein TssD"
                     /GO_component="GO:0033104 - type VI protein secretion
                     system complex [Evidence IEA]"
                     /calculated_mol_wt=14078
     Region          2..130
                     /region_name="TssD"
                     /note="Hemolysin coregulated protein Hcp (TssD);
                     pfam17642"
                     /db_xref="CDD:435939"
ORIGIN      
        1 mafeatvsid ggtarrlhhc sysvsqsady vtgkttsevf agnlslvveg ikesefwkla
       61 ihptkrskgk ivfkdpsdie kdfktvefee gavvgysesm dagttgtmte nvtisckkit
      121 vdgvafekkw
//
LOCUS       WP_235159852             704 aa            linear   BCT 02-MAR-2025
DEFINITION  PKD domain-containing protein [Dyadobacter sp. CY351].
ACCESSION   WP_235159852
VERSION     WP_235159852.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040138.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18911.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..704
                     /product="PKD domain-containing protein"
                     /calculated_mol_wt=75118
     Region          <16..>340
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          110..194
                     /region_name="PKD"
                     /note="polycystic kidney disease I (PKD) domain; similar
                     to other cell-surface modules, with an IG-like fold;
                     domain probably functions as a ligand binding site in
                     protein-protein or protein-carbohydrate interactions; a
                     single instance of the repeat is...; cd00146"
                     /db_xref="CDD:238084"
     Region          203..498
                     /region_name="COG3291"
                     /note="Uncharacterized conserved protein, PKD repeat
                     domain [Function unknown]"
                     /db_xref="CDD:442520"
ORIGIN      
        1 mrriliqlll laivfgchqe lppqpvakft ftnggctapc svtftsdsen atslewdfnd
       61 rseiqsgktv thefvdgkny yvkliaksad ggshgetqtv vieakpaapp vadfdmtpkn
      121 ggvaplkvsf dnqsknaaty kwrfgdkyas padpdsstiq spshtysvpg tytvtltayn
      181 aegkphqktk tfevkaegpt asftmdktec eapcevtftn tstkadsykw dfsdgstsie
      241 kspkhtfntp gtyvivltak gpggedpetk tltvkaklsn aiaikgtyny pthmlsdavg
      301 niyvcgamtg tadfgngkvl stgysngnld ffiakyntvg eclwaysdgs ssddiangig
      361 fddsgnvylt gslngiprks qgfrggfvak ltrdgsvtwf qsfggpgnis aegksvgfyq
      421 ttdgpriyma gtikgvtgdk dilfgnrsya addqdvvlvf ldadngsfgt plivggpnaq
      481 fvsamvidne gsayitgtfd gamsfsgrqs rlsgsgrlda fvakwnlarg dwewaidygf
      541 reddygydia inqqkelcfa mtetssgdpa lhyakinang qyelngssfg ldgwqvpggi
      601 titpagqvvl assftgkgtl rgatfdsrgn sdvliaelkv edpyvgklya hgggagedrs
      661 irvclapdgt vyntgwftgt atfnntelvg asasrntyiv kyky
//
LOCUS       WP_235159861             274 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Dyadobacter sp. CY351].
ACCESSION   WP_235159861
VERSION     WP_235159861.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 274)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..274
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=30717
     Region          7..127
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(107..110,112)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
     Region          151..264
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(258..261,263)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 mmlakktvyi vdddsddrml lrealenviq dievqefvdg qllldalann lpeqpalilm
       61 dmnmprltgl ealkriksdp lckhipviiv stssnaelir lcydqgvnay ivkpvvfqgy
      121 ieiaqsvsic fldsypefeg qvvaknfsnk tilviednqd hwqmmraalk tgmpdikvih
      181 rssqdstidf lengyaalnp pvemilldly lpnrdqglsl laqirnfias rnlppvpvii
      241 lshsdhprdi sesyaglana ylvkreklsn hfpa
//
LOCUS       WP_235159882             919 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1553 domain-containing protein [Dyadobacter sp. CY351].
ACCESSION   WP_235159882
VERSION     WP_235159882.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019223.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07587.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..919
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..919
                     /product="DUF1553 domain-containing protein"
                     /calculated_mol_wt=104904
     Region          46..102
                     /region_name="PSCyt1"
                     /note="Planctomycete cytochrome C; pfam07635"
                     /db_xref="CDD:429568"
     Region          165..376
                     /region_name="PSCyt2"
                     /note="Protein of unknown function (DUF1549); pfam07583"
                     /db_xref="CDD:429550"
     Region          425..537
                     /region_name="CBM6_xylanase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); many are
                     appended to glycoside hydrolase (GH) family 11 and GH43
                     xylanase domains; cd04084"
                     /db_xref="CDD:271150"
     Site            order(435,445..446,531)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:271150"
     Region          614..871
                     /region_name="PSD1"
                     /note="Protein of unknown function (DUF1553); pfam07587"
                     /db_xref="CDD:429553"
ORIGIN      
        1 mlsnrifiga giliiavssf fwlsgslaps svdyntevkp ilnkhcmgch ggvkkagdvs
       61 flfehemlep gksgkipvvr gdadasemir rilsddpdek mpkngtplke eeidilekwi
      121 nqgakwethw sykkiekpdv pslngfsnlf glfdneekkw atneidhfvl dklkdkglhv
      181 saeadratli rrvsldltgl pptekqvadf indksenayg kvvdrllksp aygerwtsmw
      241 mdlaryadtk gyesdggrtm wryrdyvvks fnedkpfdqf tieqlagdll qkdkdgfple
      301 enmiatgyhr ntmtnneggt ddeefrtaaq idrvnttwev wqgttfaciq chshpydpip
      361 hedyykymaf fnntrdedvw dewpkmrfyk gedsvrverv kswirqnkpe qlpqvtqfmk
      421 vmepkinahn fvkgdqstvl lisyygvknn gnariaqvdl seadnvvmnv stkaqnavls
      481 lhldkldgpv isqikvpard sviiapltkt pgkhdiflsl kspnnpeewv ritwmsfqka
      541 lpgkdkpeyn nivadyatvl trqtesmpvi wegkgdfark tnvfvrgnwm vkgaevkpdv
      601 pkllapmpkd aprdrvglak wivsrdnalt srvivnrfwe qlfgkgivet vedfgsqgae
      661 pthpelldwl avkfmeedkw sikkmlktiv msstyrqssk tdenklekdp yniwisrgpr
      721 vrlsaeqvrd qalacsglis dkmygpgvmp pqpdkiwqsp ysgekwvlse gedryrrgvy
      781 tywkrtapyp smvtfdapsr efcqsrrilt ntplqalvtl ndpvyleaae klatrmqqrg
      841 ktpeqqlkeg yrmltfqnie qknlnvlvkv ykqaldaykk kpveadsila ygkertpela
      901 altisanvml nldnvitke
//
LOCUS       WP_235159875             340 aa            linear   BCT 02-MAR-2025
DEFINITION  c-type cytochrome [Dyadobacter sp. CY351].
ACCESSION   WP_235159875
VERSION     WP_235159875.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024834.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13442.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..340
                     /product="c-type cytochrome"
                     /GO_function="GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=36905
     Region          157..>324
                     /region_name="DHOR"
                     /note="Di-haem oxidoreductase, putative peroxidase;
                     cl21467"
                     /db_xref="CDD:473872"
ORIGIN      
        1 mkfrtyleti agigiyplis liiffvffvs livfvigidk kslqkmesmp lndgvikkal
       61 lsllffftmg gpafaqetae piraisgnel illvllailf faallvvial vntvtllrki
      121 sapakaetqd apviswwkkf agmsilpsqe hqliiqghdy dgiqeldnrm ppwlqslfla
      181 tvvigvgyga yyfsgigdyq laelekevaq aeidkkayma kvgasmdent vtligeeaai
      241 gqgkaifqek ctachgadgg gsvgpnltda ywlhgagikn lfkvikygvp ekgmiswekq
      301 lsptdiqkva syvhslqgtk paspkepqge lvssnqvaen
//
LOCUS       WP_235159786             233 aa            linear   BCT 02-MAR-2025
DEFINITION  MCP four helix bundle domain-containing protein [Dyadobacter sp.
            CY351].
ACCESSION   WP_235159786
VERSION     WP_235159786.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 233)
  AUTHORS   Ulrich,L.E. and Zhulin,I.B.
  TITLE     Four-helix bundle: a ubiquitous sensory module in prokaryotic
            signal transduction
  JOURNAL   Bioinformatics 21 Suppl 3 (Suppl 3), iii45-iii48 (2005)
   PUBMED   16306392
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024140.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12729.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..233
                     /product="MCP four helix bundle domain-containing protein"
                     /calculated_mol_wt=25841
     Region          5..184
                     /region_name="chemoreceptor_sensor"
                     /note="4-helix bundle ligand binding sensor domain of
                     chemoreceptors such as Tar or Tsr; cl00144"
                     /db_xref="CDD:444710"
ORIGIN      
        1 mkwsfviqqk lkaamllggi maliilatll srrnmdgidk sfssiyqdrl ipattiiylt
       61 enlygkrlsl eeylltngtg nkneirvqls thnknidsli kafeqtylvd eeaksltafk
      121 nevhrytale ksilglynag aqeegkrlfa gvgantfknt itnlneltni qssigkdlmk
      181 esksdiasfg iisflqiala vviglmllvl iqnssivnkp kisgqknqyf nln
//
LOCUS       WP_235159916             357 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Dyadobacter sp. CY351].
ACCESSION   WP_235159916
VERSION     WP_235159916.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 357)
  AUTHORS   Mengin-Lecreulx,D., Texier,L., Rousseau,M. and van Heijenoort,J.
  TITLE     The murG gene of Escherichia coli codes for the
            UDP-N-acetylglucosamine: N-acetylmuramyl-(pentapeptide)
            pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
            involved in the membrane steps of peptidoglycan synthesis
  JOURNAL   J Bacteriol 173 (15), 4625-4636 (1991)
   PUBMED   1649817
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016027.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04101.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..357
                     /product="glycosyltransferase"
                     /GO_function="GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=38849
     Region          1..350
                     /region_name="COG4671"
                     /note="Predicted glycosyl transferase [General function
                     prediction only]"
                     /db_xref="CDD:443708"
ORIGIN      
        1 msanfafyih hhgsghlmra lsiasqlrda qvtflgsdlt rfaaiipati qcihlphdvp
       61 gpedpfasrm hlgflhyapv nvekvakraa visaalhalf pvilivdvsv evtllatlcg
      121 tptvvirqng drddlahlha yesaqlliap speelmnpsp qdwvnqktff sggfskysgk
      181 ekyvqktenp aigvlvgsgg tsingkvina laaqcsersi lvigniadhe hiaahnvifh
      241 gqmndpasvl aqcrvvigna ghntvmemad lgkkfvcipe drpfqeqlrk aglleqhgma
      301 vlvqpeeldq tdwkiiiqka enlpddcwkg vikdsaladv alrlhelwda nfpdrla
//
LOCUS       WP_235159953             252 aa            linear   BCT 02-MAR-2025
DEFINITION  oxygenase MpaB family protein [Dyadobacter sp. CY351].
ACCESSION   WP_235159953
VERSION     WP_235159953.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 252)
  AUTHORS   Zhang,W., Du,L., Qu,Z., Zhang,X., Li,F., Li,Z., Qi,F., Wang,X.,
            Jiang,Y., Men,P., Sun,J., Cao,S., Geng,C., Qi,F., Wan,X., Liu,C.
            and Li,S.
  TITLE     Compartmentalized biosynthesis of mycophenolic acid
  JOURNAL   Proc Natl Acad Sci U S A 116 (27), 13305-13310 (2019)
   PUBMED   31209052
REFERENCE   2  (residues 1 to 252)
  AUTHORS   Ilcu,L., Rother,W., Birke,J., Brausemann,A., Einsle,O. and
            Jendrossek,D.
  TITLE     Structural and Functional Analysis of Latex Clearing Protein (Lcp)
            Provides Insight into the Enzymatic Cleavage of Rubber
  JOURNAL   Sci Rep 7 (1), 6179 (2017)
   PUBMED   28733658
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 252)
  AUTHORS   Birke,J., Rother,W. and Jendrossek,D.
  TITLE     Latex Clearing Protein (Lcp) of Streptomyces sp. Strain K30 Is a
            b-Type Cytochrome and Differs from Rubber Oxygenase A (RoxA) in Its
            Biophysical Properties
  JOURNAL   Appl Environ Microbiol 81 (11), 3793-3799 (2015)
   PUBMED   25819959
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021509.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09995.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..252
                     /product="oxygenase MpaB family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=29164
     Region          <49..>152
                     /region_name="MPAB_Lcp_cat"
                     /note="ER-bound oxygenase mpaB/B'/Rubber oxygenase,
                     catalytic domain; cl01472"
                     /db_xref="CDD:470218"
ORIGIN      
        1 mkwfvkedsv vreiwgnadt ilfifagasa efavnksvdw lyftgklpad plarlfstvt
       61 ysrrivfsey haalqaidqi taihqkveke rgaqipdway rdvlfmlidy sirsfeller
      121 kltkvekaev fevfyqvgsr mgigglptdy eawlvmrnqq ldenfvksaf sidlykqykk
      181 hlglpryvml kevqvrlvpq hinqllslgs wsvlkmvlpa ykiarsfrlh qfvkdlilpa
      241 kykmeiagld ar
//
LOCUS       WP_235159966             729 aa            linear   BCT 02-MAR-2025
DEFINITION  catalase [Dyadobacter sp. CY351].
ACCESSION   WP_235159966
VERSION     WP_235159966.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012425.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00199.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..729
                     /product="catalase"
                     /EC_number="1.11.1.6"
                     /GO_function="GO:0004096 - catalase activity [Evidence
                     IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=81315
     Region          16..729
                     /region_name="katE"
                     /note="hydroperoxidase II; Provisional; PRK11249"
                     /db_xref="CDD:236886"
ORIGIN      
        1 midnkesegs nanqenekta nlapnttdst gefmttntgl rvnddqnslk agdrgatlle
       61 dfilrekith fdheriperv vhargsgahg vfkvyepmsa vtkagflndt sietpvfvrf
      121 stvagskgst dlardvrgfa vkfytqegnf dlvgnnmpvf fiqdaikfpd lvhavkpepd
      181 nempqaasah dtfwdfislm pesahmimwl msdraiprsy rmmegfgvht frfineegvs
      241 hfvkfhwkpl lgvhsvawde aqkisgkdpd fhrrdlwdai esgnfpewel gvqivpeede
      301 fkfdfdlldp tkiipeelvp vqrigkmtln rnpdnffaet eqvayhlghi vpgidftndp
      361 llqgrlfsyt dtqllrlggp nfqeipinrp ivrvdnnqrd ghmrqtinrg kssynpntlg
      421 ggfpaqakas eggftsyper idakkirars ksffdhfsqa klffdsqsdp eknhivdals
      481 felgkvktve irqrmvgils lidkglaaev afalrvhvpq dpelpinhsi padgdpadyd
      541 svmqesvvti sdalsmvntp kdsiqtrkia flaadgvdek sittvrdalv sagavveiis
      601 trhnyimtes dtklpvdhtf ltaasvlyda vyvpggtnsv asieaeadav hflneafkhc
      661 kpiasdlsai qvleatyfsk klpadyddat ilkeglvvld dvdqladkfi laisqhrfwe
      721 rekprkipa
//
LOCUS       WP_235159967             338 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Dyadobacter sp. CY351].
ACCESSION   WP_235159967
VERSION     WP_235159967.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 338)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 338)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..338
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=36015
     Region          11..327
                     /region_name="PRK06196"
                     /note="oxidoreductase; Provisional"
                     /db_xref="CDD:235736"
ORIGIN      
        1 mgqnndqgal qqpigsgfha tstandvikg idltgkiaiv tggntgigle ttrvlataga
       61 tvivpardie karknlagip nvelgkidfm dpasidafae sfmatnrplh ilinnagimw
      121 vplrrdvrgi esqlatnylg qyqltarlwp alkkangarv vnvsslghqm apfdfedpnf
      181 vhreyqtlqa ygqsktasnl ftvalnslge qfnvrayslh pgsihgtelg reaslelfqq
      241 mgfmdsagnl lpevlaalkt ipqgaattvw catspmlknm ggvycedadi arlspkgdtg
      301 qsgvqaysld lesarklwvw sqqvtgipfg agaslvqs
//
LOCUS       WP_235159977             725 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-glucuronidase family glycosyl hydrolase [Dyadobacter sp.
            CY351].
ACCESSION   WP_235159977
VERSION     WP_235159977.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 725)
  AUTHORS   Nurizzo,D., Nagy,T., Gilbert,H.J. and Davies,G.J.
  TITLE     The structural basis for catalysis and specificity of the
            Pseudomonas cellulosa alpha-glucuronidase, GlcA67A
  JOURNAL   Structure 10 (4), 547-556 (2002)
   PUBMED   11937059
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03648.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..725
                     /product="alpha-glucuronidase family glycosyl hydrolase"
                     /GO_function="GO:0046559 - alpha-glucuronidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0045493 - xylan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=81442
     Region          39..708
                     /region_name="AguA2"
                     /note="Alpha-glucuronidase [Carbohydrate transport and
                     metabolism]; COG3661"
                     /db_xref="CDD:442878"
ORIGIN      
        1 mtkspflmlf sclligfkll aadlsgaeas gaeasdaepl asdgndgyrl wlnyepvrna
       61 smkseylkya afigrpasgq imqsasqelq lglgklldks vnitnsfagk sggivfkiet
      121 sastaqpveg yriqlsggnv iisskseqgi lygtfallrh mqmqlpvkgl nlassprvry
      181 rmlnhwdnpd gtiergyagq slwkwyelpe rvdpryadya ranaslging tvlnnvnasa
      241 rfmsqeyivk vaavanvmrk ygiktylsvy faapktlggl ktsdpldpqv rawwkekvaq
      301 iykeipdfgg flvkansege pgpqdygrth adganmlaea fkpydgiviw rafvykadpn
      361 adrfkaahee fvpldgkfdq kvivqvkngp idfqprepfs plfgnmpktp lgiefqitqe
      421 ylgfathavy eapifeecld sdtyvngags tvakivdgsl hgyertlmag vantgnsrnw
      481 tghplaqanw yafgrlswdh qltseqiare wialtltqna kasehitalm lrsreiyvdy
      541 ntplglsrpw mgvhfapepw qnkgsrpdwt avyyhradsi glgfdrtasg snalaqyrpe
      601 vqkqwnnpdq tplpyllwfh hvrwdkklst grtlweelct rfytgadsvv wmqqqwdlak
      661 psldpqiytd vaerlkvhrr eaiwwrdawv lylqtftkqp vpagfeppkq tledvkksvn
      721 vylmr
//
LOCUS       WP_235160000             386 aa            linear   BCT 02-MAR-2025
DEFINITION  glycan-binding surface protein [Dyadobacter sp. CY351].
ACCESSION   WP_235160000
VERSION     WP_235160000.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 386)
  AUTHORS   Tauzin,A.S., Kwiatkowski,K.J., Orlovsky,N.I., Smith,C.J.,
            Creagh,A.L., Haynes,C.A., Wawrzak,Z., Brumer,H. and Koropatkin,N.M.
  TITLE     Molecular Dissection of Xyloglucan Recognition in a Prominent Human
            Gut Symbiont
  JOURNAL   mBio 7 (2), e02134-e02115 (2016)
   PUBMED   27118585
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037325.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18329.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..386
                     /product="glycan-binding surface protein"
                     /GO_function="GO:0030247 - polysaccharide binding
                     [Evidence IEA]"
                     /calculated_mol_wt=42628
     Region          140..219
                     /region_name="IPT"
                     /note="Immunoglobulin-like fold, Plexins, Transcription
                     factors (IPT). IPTs are also known as Transcription factor
                     ImmunoGlobin (TIG) domains. They are present in
                     intracellular transcription factors, cell surface
                     receptors (such as plexins and scatter factor...; cd00102"
                     /db_xref="CDD:238050"
     Region          205..381
                     /region_name="SGBP_B_XBD"
                     /note="Surface glycan-binding protein B xyloglucan binding
                     domain; pfam18329"
                     /db_xref="CDD:465713"
ORIGIN      
        1 mknryrsalm fallalmaaf qisckeddvd thgepsityi rvtnpassds llvgafqsnl
       61 iaivgenlqd vteiwfndqk avltptyitn ksilvsvpam vpkeisnkmr mifsngrtle
      121 hdfevqisep eltgmnceyv atggiating nyfyppltvt faggvtgelv svtdqiiqvr
      181 vpqgalpgqv tvktafgetk sdfwfrdnrn iflsndpftg wwnqayvvtk pgagdpvain
      241 gnyirvkevv sgwqwkevag gppdamgpis knipdeailr padynlkfev ntlkpynnnl
      301 lkinvglakd fvtdayqwap pydtkgewrt vtipfneiaa syeslgvkma vnpngyytrl
      361 lfhgggdlda dismdnfrvv pkilkk
//
LOCUS       WP_235160097             140 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Dyadobacter sp. CY351].
ACCESSION   WP_235160097
VERSION     WP_235160097.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 140)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..140
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=15974
     Region          21..131
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(107..110,112)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 mdkngpiiii eddaddqyvl eevfnelgyp nqriyfsdgq saldylyssq erpfiiisdi
       61 nlpqlnglel rrklqtdael slkcipyvyf ttainqqvvi daystsaqgf fvkpgkfgei
      121 ketikvmidy wkrcaapnnf
//
LOCUS       WP_235160100             144 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Dyadobacter sp. CY351].
ACCESSION   WP_235160100
VERSION     WP_235160100.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 144)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..144
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=16842
     Region          6..131
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(107..110,112)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 mnkkgpivii eddmddqdil seifkelnyk nelvffgdgv qaleylthin iepflvlsdi
       61 nmpklngmel yekihnnedl rlksipylff stsaeqkhvi eaysrsiqgf fikpsnydrl
      121 kkmivkivey wqecespnyi knaq
//
LOCUS       WP_235160029             130 aa            linear   BCT 02-MAR-2025
DEFINITION  plasmid mobilization protein [Dyadobacter sp. CY351].
ACCESSION   WP_235160029
VERSION     WP_235160029.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 130)
  AUTHORS   Rehman,S., Li,Y.G., Schmitt,A., Lassinantti,L., Christie,P.J. and
            Berntsson,R.P.
  TITLE     Enterococcal PcfF Is a Ribbon-Helix-Helix Protein That Recruits the
            Relaxase PcfG Through Binding and Bending of the oriT Sequence
  JOURNAL   Front Microbiol 10, 958 (2019)
   PUBMED   31134011
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046164.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21983.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..130
                     /product="plasmid mobilization protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=15117
     Region          13..>88
                     /region_name="MobC_2"
                     /note="MobC-like protein; cl44929"
                     /db_xref="CDD:479920"
ORIGIN      
        1 mkkdknnrtk llnvrltpee fqqllrkvqk ttcrktseya rkvllsepvi vnhrnqsfde
       61 vmveltrlrs elskagsnln qavkrlhals qiadfrswle ayegdknrli emvneintyi
      121 skaskiwlqs
//
LOCUS       WP_235160116             117 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Dyadobacter sp. CY351].
ACCESSION   WP_235160116
VERSION     WP_235160116.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 117)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..117
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=13581
     Region          2..112
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(95..98,100)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 msilyidhei nnlnsfkasf rrdatiylad tldkglkvle eeqidvifvd hqmpdmtgle
       61 flkmaskqyp esirvlltgq aynaefkhae vkgylhnfvt kpwdeqdlrr liitnmm
//
LOCUS       WP_235160123             449 aa            linear   BCT 02-MAR-2025
DEFINITION  MutS-related protein [Dyadobacter sp. CY351].
ACCESSION   WP_235160123
VERSION     WP_235160123.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 449)
  AUTHORS   Obmolova,G., Ban,C., Hsieh,P. and Yang,W.
  TITLE     Crystal structures of mismatch repair protein MutS and its complex
            with a substrate DNA
  JOURNAL   Nature 407 (6805), 703-710 (2000)
   PUBMED   11048710
REFERENCE   2  (residues 1 to 449)
  AUTHORS   Tachiki,H., Kato,R., Masui,R., Hasegawa,K., Itakura,H., Fukuyama,K.
            and Kuramitsu,S.
  TITLE     Domain organization and functional analysis of Thermus thermophilus
            MutS protein
  JOURNAL   Nucleic Acids Res 26 (18), 4153-4159 (1998)
   PUBMED   9722634
  REMARK    Erratum:[Nucleic Acids Res 1998 Oct 15;26(20):following 4789]
REFERENCE   3  (residues 1 to 449)
  AUTHORS   Jiricny,J.
  TITLE     Colon cancer and DNA repair: have mismatches met their match?
  JOURNAL   Trends Genet 10 (5), 164-168 (1994)
   PUBMED   8036718
REFERENCE   4  (residues 1 to 449)
  AUTHORS   New,L., Liu,K. and Crouse,G.F.
  TITLE     The yeast gene MSH3 defines a new class of eukaryotic MutS
            homologues
  JOURNAL   Mol Gen Genet 239 (1-2), 97-108 (1993)
   PUBMED   8510668
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012700.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00488.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..449
                     /product="MutS-related protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0030983 - mismatched DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006298 - mismatch repair [Evidence IEA]"
                     /calculated_mol_wt=51320
     Region          29..254
                     /region_name="MUTSd"
                     /note="DNA-binding domain of DNA mismatch repair MUTS
                     family; smart00533"
                     /db_xref="CDD:214710"
     Region          245..442
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            274..281
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213250"
     Site            order(277..278,280..282,318,355..356,390)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:213250"
     Site            315..318
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213250"
     Site            323..336
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213250"
     Site            351..356
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213250"
     Site            359..362
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213250"
     Site            386..392
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213250"
ORIGIN      
        1 mkiieifkmh pidpqtlqel qilpkssrdp silhffdyta teggrdclre mllkpkrsld
       61 eihsfqellk afiqmpdafk vdiprtyvsa aeayyasnia ysmsqdvfqh wfdtwifswr
      121 spsefyivrs gftatfrllk aieemiselp ealpelladd ilfvkallnk kgmnsllkiq
      181 dskltrrtif fwdyflrisn kkdfrrildi fykldalrsi altatihnlq fpifvanaeq
      241 vhftaeqlwh plienavpns lalhsqtpvc mltgantsgk ttflktcgia vylahagfpv
      301 paamlqltfa drlftsihls dnialgyshf fgevmrikvi aealhaqesc fviidelfrg
      361 tnqedslhcs mtvidgfark kqslflvsth lepllkhyes nvqlcfrcfr tniagddfvn
      421 tyqiengisk erlgqvilrk agvkellhg
//
LOCUS       WP_235160132             536 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme [Dyadobacter sp.
            CY351].
ACCESSION   WP_235160132
VERSION     WP_235160132.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..536
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /calculated_mol_wt=58165
     Region          41..405
                     /region_name="SelA"
                     /note="Seryl-tRNA(Sec) selenium transferase [Translation,
                     ribosomal structure and biogenesis]; COG1921"
                     /db_xref="CDD:441524"
ORIGIN      
        1 mkrrdaikdl smlplagsim lpqkksaetv srnadvaagk eiyqaigvep iincrgtfti
       61 iggsierpev raamdaaaqv fvqydelafg agkrlaeltg aewglvsagc aagmkhvtva
      121 cvtggnpekl irvpnlagfd kteviiprys rnvydhalrn vgvtlitvds ieelsnaiss
      181 rtamiylmag desmsgpmsl eaisklakpk nipvmvdaaa edltipnvhl kmgadvviys
      241 ggkalcgpqc aglvlgrkdl lmsawqasap hhgpgrdnkv greetmgmva aveawikrdh
      301 agewkkwlsw ldniskkvst idsvkttvve pkqlsnrtpq lriswdpakl nitgeeiael
      361 fgrtkprial gggtrdgatf vsittgqmqp gddkvvsdrl fevlsqkrtp qkaemtapsv
      421 slkghweadv effsskskqt liieqdgnwl egshkgefsv remqgtvegn efkmrstdrq
      481 pgdaitfmfs gtvkddvmtg siymgeymta kftakkqkfk mkrekimips gpplat
//
LOCUS       WP_235160135             665 aa            linear   BCT 02-MAR-2025
DEFINITION  T9SS type A sorting domain-containing protein [Dyadobacter sp.
            CY351].
ACCESSION   WP_235160135
VERSION     WP_235160135.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 665)
  AUTHORS   Veith,P.D., Nor Muhammad,N.A., Dashper,S.G., Likic,V.A.,
            Gorasia,D.G., Chen,D., Byrne,S.J., Catmull,D.V. and Reynolds,E.C.
  TITLE     Protein substrates of a novel secretion system are numerous in the
            Bacteroidetes phylum and have in common a cleavable C-terminal
            secretion signal, extensive post-translational modification, and
            cell-surface attachment
  JOURNAL   J Proteome Res 12 (10), 4449-4461 (2013)
   PUBMED   24007199
REFERENCE   2  (residues 1 to 665)
  AUTHORS   Glew,M.D., Veith,P.D., Peng,B., Chen,Y.Y., Gorasia,D.G., Yang,Q.,
            Slakeski,N., Chen,D., Moore,C., Crawford,S. and Reynolds,E.C.
  TITLE     PG0026 is the C-terminal signal peptidase of a novel secretion
            system of Porphyromonas gingivalis
  JOURNAL   J Biol Chem 287 (29), 24605-24617 (2012)
   PUBMED   22593568
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039201.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18962.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..665
                     /product="T9SS type A sorting domain-containing protein"
                     /GO_component="GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /calculated_mol_wt=72785
     Region          126..>333
                     /region_name="SASA"
                     /note="Carbohydrate esterase, sialic acid-specific
                     acetylesterase; pfam03629"
                     /db_xref="CDD:427409"
     Region          350..>579
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          600..665
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     cl46851"
                     /db_xref="CDD:481191"
ORIGIN      
        1 mkknlltifs llllllsqsv faqvtvtfpt eravfqrnna neanvyiggy itepfehiea
       61 rfvprvtgeg eaapagggwt iidasfssgh fygmmtvkgg wyrlevraik agsepklssv
      121 ervgigeifv vagqsnatgg danpngpgas ndqvnsvnfq nvsdgavtey nnvqlpcpef
      181 vhldagtkts pfgnyawcwg sfgdkiyeky hvpvmifnag wsstgieewr qtidpdaitt
      241 gpfgytfprg lpfghlrlal nnyvaqlgir avlwhqgetd nfiessivgs akdryrdklw
      301 evinasrnls gknnlawvva rasrftfdga trvsanviaa qnelidndat yahvyqgpdt
      361 dpyysieyra devhfrgdgv tqspdgnvys glislagfwn dritsdflsq stpypalppv
      421 evtatqaagt tdltfagpgi psgsvynwls adncnqveat sqqwtagtgf yklkiidank
      481 ntifsprlyv sgtalpvtwk yfnvrntgns rpliqwatse etnashfele rsenavvfts
      541 intvaaaghs natnayayqe eflpsgiyyy rikqvdldgk fnftrvvstn iaessiikay
      601 pnpvtdllni esekvlgive vfnvagtkly tskqnlntms ldmskfptgl ytvttngksa
      661 kvikk
//
LOCUS       WP_235160193              77 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: type II toxin-antitoxin system HicB family antitoxin
            [Dyadobacter].
ACCESSION   WP_235160193
VERSION     WP_235160193.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
REFERENCE   1  (residues 1 to 77)
  AUTHORS   Winter,A.J., Williams,C., Isupov,M.N., Crocker,H., Gromova,M.,
            Marsh,P., Wilkinson,O.J., Dillingham,M.S., Harmer,N.J.,
            Titball,R.W. and Crump,M.P.
  TITLE     The molecular basis of protein toxin HicA-dependent binding of the
            protein antitoxin HicB to DNA
  JOURNAL   J Biol Chem 293 (50), 19429-19440 (2018)
   PUBMED   30337369
REFERENCE   2  (residues 1 to 77)
  AUTHORS   Hall,A.M., Gollan,B. and Helaine,S.
  TITLE     Toxin-antitoxin systems: reversible toxicity
  JOURNAL   Curr Opin Microbiol 36, 102-110 (2017)
   PUBMED   28279904
REFERENCE   3  (residues 1 to 77)
  AUTHORS   Bibi-Triki,S., Li de la Sierra-Gallay,I., Lazar,N., Leroy,A., Van
            Tilbeurgh,H., Sebbane,F. and Pradel,E.
  TITLE     Functional and structural analysis of HicA3-HicB3, a novel
            toxin-antitoxin system of Yersinia pestis
  JOURNAL   J Bacteriol 196 (21), 3712-3723 (2014)
   PUBMED   25112480
REFERENCE   4  (residues 1 to 77)
  AUTHORS   Makarova,K.S., Grishin,N.V. and Koonin,E.V.
  TITLE     The HicAB cassette, a putative novel, RNA-targeting toxin-antitoxin
            system in archaea and bacteria
  JOURNAL   Bioinformatics 22 (21), 2581-2584 (2006)
   PUBMED   16895922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10003996
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..77
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /GO_component="GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA]"
                     /calculated_mol_wt=8577
     Region          2..61
                     /region_name="HicB"
                     /note="Antitoxin component HicB of the HicAB
                     toxin-antitoxin system [Defense mechanisms]; COG1598"
                     /db_xref="CDD:441206"
ORIGIN      
        1 mkftvliskg eefligrike ipsvmtqget inevmenisd alslyaqdsf eslpqddqfi
       61 edeiygaiis tkelefa
//
LOCUS       WP_235160267             253 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: SDR family NAD(P)-dependent oxidoreductase
            [Dyadobacter].
ACCESSION   WP_235160267
VERSION     WP_235160267.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
REFERENCE   1  (residues 1 to 253)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 253)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..253
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=27425
     Region          1..250
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(8,10..11,13,32..34,89..91,148,152,176..179)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
ORIGIN      
        1 marifitgsv dglgqlaana lvhkghsvvl harnrersky glamvpgaea vltgdlssie
       61 etknladqvn algqfdaiih nagvyqmhen kltldglppl favntiapyv ltclikqphr
      121 liytssgmhk qadpnlsgln qeklsitysd skfhnlilam avarlrpdiy anavdpgwvp
      181 tkmggpgapd nlqkgfatqv wlavssdeqa kisgmylhhq kpdrylrqad qgavqekfls
      241 fcenltgial pfv
//
LOCUS       WP_235160281             141 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: response regulator [Dyadobacter].
ACCESSION   WP_235160281
VERSION     WP_235160281.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..141
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=15389
     Region          17..126
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(106..109,111)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 mrrsttffla dddaddrllm ieaikaidpn iaivesengq elltvlesqt afdrcliild
       61 mnmpkmngle tlsnlriipr laslptvmls tsgnpnmidf akklgaldyy ikpstmdglv
      121 nlcrqlvfgk agqpdvgpgm l
//
LOCUS       WP_235160286             387 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein [Dyadobacter sp. CY351].
ACCESSION   WP_235160286
VERSION     WP_235160286.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 387)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..387
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=44125
     Region          5..194
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(12..18,163)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350690"
     Region          <157..359
                     /region_name="HelD"
                     /note="DNA helicase IV [Replication, recombination and
                     repair]; COG3973"
                     /db_xref="CDD:443173"
ORIGIN      
        1 mqkenrlvla cagsgkttfl vrraleessg siiittftea nkneikqkfv qlnggvpghv
       61 timtwftfll khgvkpfqgs fnhellniri kgmifcqqas gqyknlngev ryvgeqqfkr
      121 yyftqdykiy sdklskfvcq adgvvggevv sricriythi fidevqdlag ydlefikllf
      181 kntsnillvg dprqvtylth herkhsgykg glikqfllke ikkvryiide ttliashrnn
      241 kpicdfsskl ypefkasipc dctecrgtty qhtgiflvkp edvktyvqqy spvllrdnss
      301 ihpdwnfgks kglsfdrvli yptqpmtkyl rdgkltkivs gvekpafeis nfyvaitrar
      361 isvgivckfe keesfidgvq ffdpsgl
//
LOCUS       WP_235160296             383 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Dyadobacter sp. CY351].
ACCESSION   WP_235160296
VERSION     WP_235160296.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..383
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=42514
     Region          2..379
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mkiihvvsgm dpkaggisqa irtmiggltd qgiysevvsv gpetanpetd dpfpihftgp
       61 gksawqfsag lqswlknnlr hydavlvhgl wqyhtyavye avsnmlnppk iyvmphgmld
      121 pwfqqakgre ikslrnwliw kffehriinm adgifftcet erklarhtfs syypksemvv
      181 glgvhrpply siemqeafsr acdvkgggyl lflgridakk gvnllvdayl slkseghdlp
      241 plviagpgmd tpfgmgikkq arydqeiyfp gmlsgpakwg afygceafll pshqenfgia
      301 vveamacsrp vlisdqvniw reiehngggl vekdtsdgir nllvnwlsls qidrarmstq
      361 arkaflgdfs vekaagklgk vls
//
LOCUS       WP_235160340             223 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6766 family protein [Dyadobacter].
ACCESSION   WP_235160340
VERSION     WP_235160340.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042831.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20554.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..223
                     /product="DUF6766 family protein"
                     /calculated_mol_wt=24951
     Region          8..223
                     /region_name="DUF6766"
                     /note="Domain of unknown function (DUF6766); pfam20554"
                     /db_xref="CDD:466703"
ORIGIN      
        1 mgqankqhsf lyrnglgllf valfiitlga qavtgwyehn seleqeqaaa itflsylqtg
       61 hfisatfenf eseflqmaly viltvglrqq gsaeskslde peevdrepkp gpdapwpvrk
      121 ggfvlklyen slslvfgilf iiswglhlyg swvdhneqqv llgkakdsig dyllqanfwf
      181 etfqnwqsef lsiasivilt iflrqkgspe skpvdapnse tgk
//
LOCUS       WP_235160392             498 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Dyadobacter sp.
            CY351].
ACCESSION   WP_235160392
VERSION     WP_235160392.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 498)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 498)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 498)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 498)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..498
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=55371
     Region          5..492
                     /region_name="PRK10938"
                     /note="putative molybdenum transport ATP-binding protein
                     ModF; Provisional"
                     /db_xref="CDD:182852"
     Region          275..497
                     /region_name="ModF"
                     /note="ABC-type molybdenum transport system, ATPase
                     component ModF/photorepair protein PhrA [Inorganic ion
                     transport and metabolism]; COG1119"
                     /db_xref="CDD:440736"
ORIGIN      
        1 malvsllgvs arkfnttvls didwnvepgt hwavigpngs gktilldvia gkwpvakgki
       61 synlqtqlrq aielvsndys fnrivsagae yyqqrfhaye serapsvrai ltdqlkpvgt
      121 vnensvqlap atvsdaelnn vasllsithl ldhpfvtlsn getrrmllak sllkkpeili
      181 ldnafsgldv hsrevlrnal telaqsgvti imattateip lcithvmeln egqitvqrei
      241 rdyktasath ihnpkpdpek lahfglpqhi dfnyaidmrd ihvryhdqli ldhvnwkiak
      301 gekwalsgpn gsgkstllsi itadnpqrfa ndydlfdqkr ggagasiwdi kqkighvspe
      361 lhlyfprets vfktiasgff datgvffkkl teqqiervhe vaallhvdhl iekkfselsk
      421 gqqrmvllar alvknpplli ldepcqglda daieyfkavv daicdtpert liyvshypne
      481 ipscvtktlr lekgkvle
//
LOCUS       WP_235160410             248 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxypeptidase-like regulatory domain-containing protein
            [Dyadobacter sp. CY351].
ACCESSION   WP_235160410
VERSION     WP_235160410.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 248)
  AUTHORS   Cho,K.H. and Salyers,A.A.
  TITLE     Biochemical analysis of interactions between outer membrane
            proteins that contribute to starch utilization by Bacteroides
            thetaiotaomicron
  JOURNAL   J Bacteriol 183 (24), 7224-7230 (2001)
   PUBMED   11717282
REFERENCE   2  (residues 1 to 248)
  AUTHORS   Shipman,J.A., Berleman,J.E. and Salyers,A.A.
  TITLE     Characterization of four outer membrane proteins involved in
            binding starch to the cell surface of Bacteroides thetaiotaomicron
  JOURNAL   J Bacteriol 182 (19), 5365-5372 (2000)
   PUBMED   10986238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025092.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13715.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..248
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /calculated_mol_wt=27504
     Region          32..118
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
ORIGIN      
        1 mkrslfifll ilagvtgvrd sfaqgeqsai vfsgmvvggk tteilpgati fivnagrgtl
       61 srsdgsftik vfpgdsivfg yvgfkkqyhv iprsynsdiy saivalredv vtlsgvtiyp
      121 ysteeefkka fldlklpdqa drdalarstd pdyinrmaaq vpnnaqtnyr ysmdqllfgr
      181 estgnkgfat tfpflnpfaw anfiksvkkg dlkqkdwrkd lnaaprenit kqdfippmpd
      241 ndikkngq
//
LOCUS       WP_235160413             178 aa            linear   BCT 02-MAR-2025
DEFINITION  biotin/lipoyl-containing protein [Dyadobacter sp. CY351].
ACCESSION   WP_235160413
VERSION     WP_235160413.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012584.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00364.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..178
                     /product="biotin/lipoyl-containing protein"
                     /calculated_mol_wt=19224
     Region          <81..140
                     /region_name="Biotinyl_lipoyl_domains"
                     /note="Biotinyl_lipoyl_domains are present in
                     biotin-dependent carboxylases/decarboxylases, the
                     dihydrolipoyl acyltransferase component (E2) of 2-oxo acid
                     dehydrogenases, and the H-protein of the glycine cleavage
                     system (GCS). These domains transport CO2, acyl; cl11404"
                     /db_xref="CDD:448245"
     Site            100
                     /site_type="other"
                     /note="lipoyl-biotinyl attachment site [posttranslational
                     modification]"
                     /db_xref="CDD:133456"
     Region          112..177
                     /region_name="biotinyl_domain"
                     /note="The biotinyl-domain or biotin carboxyl carrier
                     protein (BCCP) domain is present in all biotin-dependent
                     enzymes, such as acetyl-CoA carboxylase, pyruvate
                     carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA
                     carboxylase, geranyl-CoA carboxylase; cd06850"
                     /db_xref="CDD:133459"
     Site            order(134,143..145,152)
                     /site_type="active"
                     /note="carboxyltransferase (CT) interaction site [active]"
                     /db_xref="CDD:133459"
     Site            144
                     /site_type="other"
                     /note="biotinylation site [posttranslational
                     modification]"
                     /db_xref="CDD:133459"
ORIGIN      
        1 mlkiavsdap atehgddast ghvfeinkeq nnlsisgetf dgdittlgnn hfhaiwknks
       61 ynievlernv aektfhllvn gqhihtkakd eldlllegmg lqntsiakin nvkapmpgli
      121 qsvavaegdt iqkgdtllvl vamkmentik ssgngvvktl kvvageivek nqvllefq
//
LOCUS       WP_235160423             573 aa            linear   BCT 02-MAR-2025
DEFINITION  sialate O-acetylesterase [Dyadobacter sp. CY351].
ACCESSION   WP_235160423
VERSION     WP_235160423.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 573)
  AUTHORS   Surolia,I., Pirnie,S.P., Chellappa,V., Taylor,K.N., Cariappa,A.,
            Moya,J., Liu,H., Bell,D.W., Driscoll,D.R., Diederichs,S.,
            Haider,K., Netravali,I., Le,S., Elia,R., Dow,E., Lee,A.,
            Freudenberg,J., De Jager,P.L., Chretien,Y., Varki,A.,
            MacDonald,M.E., Gillis,T., Behrens,T.W., Bloch,D., Collier,D.,
            Korzenik,J., Podolsky,D.K., Hafler,D., Murali,M., Sands,B.,
            Stone,J.H., Gregersen,P.K. and Pillai,S.
  TITLE     Functionally defective germline variants of sialic acid
            acetylesterase in autoimmunity
  JOURNAL   Nature 466 (7303), 243-247 (2010)
   PUBMED   20555325
REFERENCE   2  (residues 1 to 573)
  AUTHORS   Bitto,E., Bingman,C.A., McCoy,J.G., Allard,S.T., Wesenberg,G.E. and
            Phillips,G.N. Jr.
  TITLE     The structure at 1.6 Angstroms resolution of the protein product of
            the At4g34215 gene from Arabidopsis thaliana
  JOURNAL   Acta Crystallogr D Biol Crystallogr 61 (Pt 12), 1655-1661 (2005)
   PUBMED   16301800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015585.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03629.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..573
                     /product="sialate O-acetylesterase"
                     /calculated_mol_wt=61633
     Region          87..359
                     /region_name="SASA"
                     /note="Carbohydrate esterase, sialic acid-specific
                     acetylesterase; pfam03629"
                     /db_xref="CDD:427409"
     Region          492..568
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     cl46851"
                     /db_xref="CDD:481191"
ORIGIN      
        1 mlqrniqnka tatvsgqlis nnlavslsyr irtvsatgil gaagpstnls latngmfytt
       61 lvvdkgwylt eillngvvya sakfgigdvf iiagqsnaqg tgndkdalps ntnipewvvg
      121 tfedktctkn fpasftsmfs lntsdqakqy grlgpsgnsv wayatlgkli sdvnggmpva
      181 ffnaasggtt itqwkqgsag veakhpytgv qicvghkqgs mipsdyygqp yttlknalny
      241 ygslfgvrav lwhqgeadad lsinasykat ssadyqtklq aviaksradf gapnltwyvs
      301 kasiskfgpl nsmirtgqgn vatglpnlng setdyvsgss gtttasdggd eyrsdsthfy
      361 egagsikglt wlankwfsti galvnpvapg wvpqltyskn adwrtltaqg gavqymwskv
      421 gingpaapgg nasvyttdek ylgircymkd angnwhassa invgkydnqr vaayveeetp
      481 eseepgfdln typnpftahf tiafevpenn sqvrleivnm qgeivktvvd nphakgkwqy
      541 evqnlpdqst eilfcrlkin ehstikkllq ltk
//
LOCUS       WP_235160454             262 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Dyadobacter sp. CY351].
ACCESSION   WP_235160454
VERSION     WP_235160454.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..262
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=27667
     Region          7..259
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(14,16..17,19,38..40,92..94,142..144,157,161,
                     187..190)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(116,144,157,161)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mnldltgkta lvcgstqgig lasalelall ganvtlvarn eeklreavdt ldtsagqlhr
       61 yvvadfadpe nvkeaienyl rlvpdvhilv nntggpsggp iidadpdqfl ktfqmhvinn
      121 qflaqavvps mkrahygriv niistsvkqp ivglgvsnti rgavaswskt lslelgpfgi
      181 tsnnvlpgyt vtsrldsvld mrsknsgksk devaqelqss ipirrfseak evaaavaflc
      241 tpaaasisgi nlpvdggrte sm
//
LOCUS       WP_235160451             539 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: sodium:solute symporter family transporter
            [Dyadobacter].
ACCESSION   WP_235160451
VERSION     WP_235160451.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012686.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00474.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..539
                     /product="sodium:solute symporter family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /note="Members of the Solute:Sodium Symporter (SSS), TC
                     2.A.21 as described in tcdb.org, catalyze solute:Na+
                     symport. Known solutes for members of the family include
                     sugars, amino acids, nucleosides, inositols, vitamins,
                     urea or anions, depending on the system.; Members of the
                     Solute:Sodium Symporter (SSS), TC 2.A.21 as described in
                     tcdb.org, catalyze solute:Na+ symport. Known solutes for
                     members of the family include sugars, amino acids,
                     nucleosides, inositols, vitamins, urea or anions,
                     depending on the system."
                     /calculated_mol_wt=59147
     Region          10..539
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     Site            order(58,61,353,356..357)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271360"
ORIGIN      
        1 mqqlqsldyi vfffyfivvs gygywiyqrk rstvestkdf flaegsltww aigasliasn
       61 isaeqfigms gngfsmglgi styewmaaat lvivavffmp iylknkiytm pqflsqrynp
      121 tvslimavfw lalyilvnlt silylgalav sgisgldfqf cmialavfai iitiggmkvi
      181 gftdviqvff lvigglatty lainlvsgea gidgvmtgik mmrenhddhf hmifpktspf
      241 ymqlpgltvl lggmwivnln ywgcnqyitq ralgadlkta rngilfaafl kllmpvivvl
      301 pgiaayalys kgmfqaemld adgqinadka ypvllnllpa glkglsfaal taavvaslag
      361 kansistift ldifknyigk nsdektlvri grivvvvsmi laivvspymg idkkggfqfi
      421 qemtgllspg ifasfimgff wkrtnsagal faivggflia lamhnnyfpf adwtqvpfld
      481 rmglvflicv vvmvilglvm pdekkglaid tamfiphrsf ivgaavvigi ivflyayfw
//
LOCUS       WP_235160485             175 aa            linear   BCT 02-MAR-2025
DEFINITION  DinB family protein [Dyadobacter sp. CY351].
ACCESSION   WP_235160485
VERSION     WP_235160485.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 175)
  AUTHORS   Cheo,D.L., Bayles,K.W. and Yasbin,R.E.
  TITLE     Cloning and characterization of DNA damage-inducible promoter
            regions from Bacillus subtilis
  JOURNAL   J Bacteriol 173 (5), 1696-1703 (1991)
   PUBMED   1847907
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017015.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05163.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..175
                     /product="DinB family protein"
                     /calculated_mol_wt=19844
     Region          1..168
                     /region_name="MDMPI_N"
                     /note="Mycothiol maleylpyruvate isomerase N-terminal
                     domain; cl21506"
                     /db_xref="CDD:473890"
ORIGIN      
        1 mtdrkypigp fvlkenytte dvaqflqiia tsaseyrklv eglgdddlak tyregswnir
       61 qlihhvgdia ilhyfrmkka vtepdydapt linmdawaat sdslqmpiad slnildgtnq
      121 ryvffaaald eevlskayfh sirqiwinqk aalamsvwhl qhhlahikla lgqel
//
LOCUS       WP_235160511             130 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: HEPN domain-containing protein [Dyadobacter].
ACCESSION   WP_235160511
VERSION     WP_235160511.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
REFERENCE   1  (residues 1 to 130)
  AUTHORS   Grynberg,M., Erlandsen,H. and Godzik,A.
  TITLE     HEPN: a common domain in bacterial drug resistance and human
            neurodegenerative proteins
  JOURNAL   Trends Biochem Sci 28 (5), 224-226 (2003)
   PUBMED   12765831
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017020.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05168.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..130
                     /product="HEPN domain-containing protein"
                     /calculated_mol_wt=14944
     Region          7..123
                     /region_name="HEPN"
                     /note="HEPN domain protein, predicted toxin of MNT-HEPN
                     system [Defense mechanisms]; COG1895"
                     /db_xref="CDD:441499"
ORIGIN      
        1 msevklykii rkvdecldta rdslegahfe avvnrsyyai fhsiqallhv qgvetkthlg
       61 ahnkfrelyi kselmemslt dmlqrtsdkr qfgdydyeev dgaqaeeala daeyftkaai
      121 hylkqnnhlk
//
LOCUS       WP_235160518            1452 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: efflux RND transporter permease subunit
            [Dyadobacter].
ACCESSION   WP_235160518
VERSION     WP_235160518.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
REFERENCE   1  (residues 1 to 1452)
  AUTHORS   Murakami,S., Nakashima,R., Yamashita,E. and Yamaguchi,A.
  TITLE     Crystal structure of bacterial multidrug efflux transporter AcrB
  JOURNAL   Nature 419 (6907), 587-593 (2002)
   PUBMED   12374972
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00873.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1452
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..1452
                     /product="efflux RND transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=157698
     Region          4..1050
                     /region_name="AcrB"
                     /note="Multidrug efflux pump subunit AcrB [Defense
                     mechanisms]; COG0841"
                     /db_xref="CDD:440603"
     Region          1130..1452
                     /region_name="AcrA"
                     /note="Multidrug efflux pump subunit AcrA (membrane-fusion
                     protein) [Cell wall/membrane/envelope biogenesis, Defense
                     mechanisms]; COG0845"
                     /db_xref="CDD:440606"
ORIGIN      
        1 myqlirtalr qpisivvvvi gilffsilsi rsipvdifpn ldlptiyvvq pyggmapdqm
       61 dgfiatryqd hflyvsgird vdvktiqgls liklsfypgt dmaqaaaeva nnvsrakaym
      121 pegtvppqvv rfdassvpig qmvfesssrs lneiqdfass rvrpmfsrie gvsspppfgg
      181 nqrtivirvd perirsyhlt peeiiksivt nnqpspagni rmgdktlmtp vnslikqped
      241 flnipiriga gptvfvrdvg tvedgadvtv syalingrra vyipvvkksd astldvvnni
      301 raalpqlrna vpedvkisye fdqsvyvtns lkslitegil galltglmvl lflrdwrsvi
      361 ivivtipisi lsavilmnlf gqtinimtls glalaigvlv dqatvtieni hqhqemgkpk
      421 eqaiwdacke iafpeflill ailavfapsf vmsgiprsmf lplslavgfa miasfllsqt
      481 lvpvlanwll kdhphheapt laldqkeidd vieegahpsl ppkgfekfkl kyidflsgim
      541 rkgklvvpvy ligavalivg gffligtdil pkanshqfqm rlriadgtrv erteqatlkv
      601 lnliksevgk ehveissayv gtvpssygts nifvfnsgph eavlqvslre dfpvkmdalk
      661 eklrerigke ipalkisfep ielvdkimsq gastpievsv aakdveeagr fakkiqkemq
      721 hiaflrdvei aqpleypvln veinreragq lgitstqvar smvaatsssr ftdknlwldd
      781 akglayqvqv qipeyqmtsv edigtiplkt gvsnplladv atfsektapg eydragpnrl
      841 vtvtanihkk dlgaatkavq taiknagepp rgvlvelkgq snlltetlgs lqvglviaiv
      901 imflllsaty qsfklslvvl stipavvvgs iglllitgat lnlqsymgli msvgvsvana
      961 ilmvtnaenl rlqlndshka vilaagsrir pilmtsiami agmipmasgm geggdqiapl
     1021 gqavigglia stlasllilp avftmvqkka siqslsldpe dpesnffrkq lqtslsmntl
     1081 ksfliigmls fsimscssea ettehkeqka ekepavemaa vqslkpakhl tlpgelkpwn
     1141 kvsihpkvkg fvktvhvdrg tmvlkgqila tleapevlse lsqakaqlla seaalhesqt
     1201 kfqtssmtyn rllrtnktqg avslneldva karsitdssa vamaqgnvqa arsymetksq
     1261 lakyltvtap fdgiiterni spgalvgpge sgakplfile dntklrltla ipenlsnaip
     1321 skgeiaftvs aspekqykgi yarssrtlse enrsmmtefd vdnrsnelka gmyaqvslns
     1381 arttntlfvp tsavvysseq vfvirekdkk aewvpvkrgt vvdslvevfg dlhagdpivk
     1441 kaseefrnge al
//
LOCUS       WP_235160522             150 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6932 family protein [Dyadobacter].
ACCESSION   WP_235160522
VERSION     WP_235160522.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046172.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22014.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..150
                     /product="DUF6932 family protein"
                     /calculated_mol_wt=17710
ORIGIN      
        1 msildfddng ylvpydiiev dwthleeffv fsmkradifi efkklvaeis aigvrhlevw
       61 idgsfastkt npndmdlicf legadyqrhe vnlavlrqnf plldvyfvkv yphddpnyfl
      121 tnfdkldwqf ffsrdrqnrk kgilkisiel
//
LOCUS       WP_235160654             435 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Dyadobacter sp. CY351].
ACCESSION   WP_235160654
VERSION     WP_235160654.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..435
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=46267
     Region          11..418
                     /region_name="PLN00028"
                     /note="nitrate transmembrane transporter; Provisional"
                     /db_xref="CDD:177665"
ORIGIN      
        1 mettnkplek lhifsfkgvq mrtfhltwma fflcffgwfg laplmtvvkt dlgltkgqig
       61 niiiasvaat vvariaigkl cdtwgprkty aalmgicsip vmtvglvhsy egfllfrlai
      121 gvigasfvit qyhtsvmfdk kivgtanava ggwgnlgggi tnmvmplvfa gfvsmgylpe
      181 sawriamvip gvllfvfafv yyrftkdtpa gnfedleitn pkavktkgtl klamkdprtw
      241 alflaygacf gieitfdnva alyffenfet slatagilag tfgfmnifar avggivadkv
      301 gnkygmigkg kllalllace gigialfaqs gsivaavvtm lcfamflkma ngvtyaivpf
      361 inqkaigsvs givgaggnvg avlagflfks sdityseafm yigvaiacia avvalinfdk
      421 trsvvtegtl epvea
//
LOCUS       WP_235160633             593 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: PA14 domain-containing protein [Dyadobacter].
ACCESSION   WP_235160633
VERSION     WP_235160633.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
REFERENCE   1  (residues 1 to 593)
  AUTHORS   Rigden,D.J., Mello,L.V. and Galperin,M.Y.
  TITLE     The PA14 domain, a conserved all-beta domain in bacterial toxins,
            enzymes, adhesins and signaling molecules
  JOURNAL   Trends Biochem Sci 29 (7), 335-339 (2004)
   PUBMED   15236739
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07691.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..593
                     /product="PA14 domain-containing protein"
                     /calculated_mol_wt=66713
     Region          <267..330
                     /region_name="PA14"
                     /note="PA14 domain; cl08459"
                     /db_xref="CDD:471833"
ORIGIN      
        1 mmpipifakk llsavlilya plafaksdmq slpfdtlkld nleqfgspdn ktwhiagnvs
       61 adrkqtgnld etkgkgilvy kplkqnhplt skaqfgnsdi eldfllskga sfqillhdry
      121 gikitddwmk evnpgakapg lwqhlaiqfq apvldkdgke kqparfkkil lngqefvnra
      181 ekrsintrgk nsnysltfig ndlpfairni ryktyngdli risdtkfkvy qglhknpdtl
      241 vslqpkrtga tdtlshlvgd rksqlamegi mdiprdgdyl fkmiagggaw fyldgkriid
      301 nkgtrdfera fyakhplkkg kypfkiiysn sdeclvlhye gpqipwqslt tpasmrvser
      361 fepleyevkn rpamqrgfmm hrneinpyta svgipastsa keksgnnyay dmkrynllsa
      421 whgrfidvsn mwtergekql eiplgaklel aqkpllanls spkapwpdsa qtaegvftnr
      481 gykltnsglp iyfytlngtt vedliraaid nagltreikt vskpgsnayl llaegrvieq
      541 tngggyavdd ksyyienlet ggvkpilrld ngrqqlilpv qkdtltikyn iiw
//
LOCUS       WP_235160681             948 aa            linear   BCT 02-MAR-2025
DEFINITION  HEAT repeat domain-containing protein [Dyadobacter sp. CY351].
ACCESSION   WP_235160681
VERSION     WP_235160681.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025030.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13646.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..948
                     /product="HEAT repeat domain-containing protein"
                     /calculated_mol_wt=108378
     Region          7..428
                     /region_name="TlcC"
                     /note="ATP/ADP translocase [Energy production and
                     conversion]; COG3202"
                     /db_xref="CDD:442435"
     Region          451..479
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          467..601
                     /region_name="HEAT"
                     /note="HEAT repeat [General function prediction only];
                     COG1413"
                     /db_xref="CDD:441023"
     Region          486..516
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          526..555
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          566..597
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
ORIGIN      
        1 mkkikdisrm lnirkdeesl vsllmaysff mggatalfyt vvassflmsf drlmlpqvyv
       61 vggvfvyllg lgltriqkri pfnrlgenal lflivsiavf lviyhltgsk wvffflfiwn
      121 rifvlvngvt fwavvvklfn fqqskrlssl insgevfssv imylavpalv kilpidslli
      181 lavgflivca vllrkihkrh vttdhtriei kpkpaehvat davdpkyfrn ifllallpvf
      241 alfyveyiff tesrnvfpnk eslasflgff fgisaileff iktffynkli skyglklgil
      301 ilplslvfsf avsviyglgy dtaaiffaci alsrffmsav rkaiaepayq vlyqpiqarf
      361 rlnvqgrieg rakamgglaa gvllfvlvni srmdalqlai lflvvavcwt fvafvgensy
      421 kkmvrdkifn fpekskknas ytpgqaisek pfeqlinqif spkeedriea alglgstnrf
      481 lsykylipll qdpnkrvrea aiytagelkr aelwpflmeq meadryftva fdalvksgpp
      541 llkyieksfl snednryrql hllkiveqig gpeairflrr nlenpnrfvk dkvlealrnl
      601 rytcntteqt fmlneldehl ktfawllsaq hdlsdayepe sqlmlnlere rmrimrkafi
      661 vleavygsrf havtllkgdq atdardylte icdlllpeni knkvlpylds dsldemrrry
      721 aeiyplatls veerlidiin kdytrisrwt kavaikelrh fdagivtpvl vanavsrski
      781 isetsfyvlr ivnparfrsl meamtrknda fhieimkple wlsteedllv sklrrlreth
      841 alggllsgel qkvlltsayf qeesgevvdl rkhlsdgdvs ilvtygklff skigaleagn
      901 irnvaeltam gvamipnvle dtefyiienf llkdlnirqn veesveih
//
LOCUS       WP_235160669             311 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GAF domain-containing protein [Dyadobacter].
ACCESSION   WP_235160669
VERSION     WP_235160669.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
REFERENCE   1  (residues 1 to 311)
  AUTHORS   Hughes,J.
  TITLE     Phytochrome three-dimensional structures and functions
  JOURNAL   Biochem Soc Trans 38 (2), 710-716 (2010)
   PUBMED   20298248
REFERENCE   2  (residues 1 to 311)
  AUTHORS   Heikaus,C.C., Pandit,J. and Klevit,R.E.
  TITLE     Cyclic nucleotide binding GAF domains from phosphodiesterases:
            structural and mechanistic insights
  JOURNAL   Structure 17 (12), 1551-1557 (2009)
   PUBMED   20004158
REFERENCE   3  (residues 1 to 311)
  AUTHORS   Aravind,L. and Ponting,C.P.
  TITLE     The GAF domain: an evolutionary link between diverse
            phototransducing proteins
  JOURNAL   Trends Biochem Sci 22 (12), 458-459 (1997)
   PUBMED   9433123
REFERENCE   4  (residues 1 to 311)
  AUTHORS   Santero,E., Hoover,T.R., North,A.K., Berger,D.K., Porter,S.C. and
            Kustu,S.
  TITLE     Role of integration host factor in stimulating transcription from
            the sigma 54-dependent nifH promoter
  JOURNAL   J Mol Biol 227 (3), 602-620 (1992)
   PUBMED   1404379
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013736.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01590.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..311
                     /product="GAF domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=34223
     Region          1..>131
                     /region_name="AmiR"
                     /note="Two-component response regulator, AmiR/NasT family,
                     consists of REC and RNA-binding antiterminator (ANTAR)
                     domains [Signal transduction mechanisms, Transcription];
                     COG3707"
                     /db_xref="CDD:442921"
     Region          <162..>290
                     /region_name="GAF"
                     /note="GAF domain [Signal transduction mechanisms];
                     COG2203"
                     /db_xref="CDD:441805"
ORIGIN      
        1 mkplnlliva iqkeylalle dslgyagykf sirqvaskql aieafyesky dllisncllp
       61 dgkitdlanv lgsqlpclvm teghcpvtae rvlavtetsy yincsnklgw ipalentlak
      121 wknnarkkid qhnqnhesly kkvlarcede lasdslsnaf slllevmdls riylyiknqp
      181 atgdaqdltl kievtapgvp akhsgktiki pgfnrwnalf dakkpvleps anmtgaeiqw
      241 lsqqdalsll avpiqgnvgw lgfigledtl nsrewtqaei gliesvasli qkknttsakt
      301 srnsklltsl a
//
LOCUS       WP_235160686             401 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5009 domain-containing protein [Dyadobacter sp. CY351].
ACCESSION   WP_235160686
VERSION     WP_235160686.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027716.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16401.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..401
                     /product="DUF5009 domain-containing protein"
                     /calculated_mol_wt=44298
     Region          10..388
                     /region_name="COG4299"
                     /note="Predicted acyltransferase, DUF1624 domain [General
                     function prediction only]"
                     /db_xref="CDD:443440"
ORIGIN      
        1 mkpllpaslr ldsidifrav tmlimifvnd fwtlkgvpew mqhskgpeda mglsdvvfpv
       61 flfivglsip faianrkskg dsngtilyhi aertfalllm gifivnyena vssgmivsky
      121 vweilmviaf fliwnvypdr pekkplytgl kvlgylllvg laviykggda anpswmgthw
      181 ygilgligwa ylvcaviyfl agdnltlnva gwlflilfnl adfagmlsfl dpvrdyvwiv
      241 gsgampaftm agvvasviyr lyskkngvna tylailvvlg ivcllygfgt rpfwgiskir
      301 atpawvgics giafivfaml fwlvdlkkvk twatiikpag tatltcylvp yiwyavltlv
      361 gfslpeflrt giigliksfc fallviivtg iinrggirlk i
//
LOCUS       WP_235160695             361 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Dyadobacter sp. CY351].
ACCESSION   WP_235160695
VERSION     WP_235160695.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 361)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..361
                     /product="AMP-binding protein"
                     /calculated_mol_wt=39776
     Region          45..356
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(47,159..160,180..185,237,248,251,262,345)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(47,87..88,133,135..136,139,159..160,180..185,237,
                     248,251,259..262,326)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(47..52,54..55)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(87,135..136,139,159,259..261,320,326)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
ORIGIN      
        1 mnnfpmlwnt sisaiktqer pehsyfaeay dfmqswlsgq qtftlqtsgs tgtpkpiqih
       61 rsqliasaqm tgkalglhag tralvclnvh yiaglmmlvr gmeldwdltv iepsanplld
      121 vngldafdft alvplqlgai lenpktenqv nrlgtvllgg atvnvslqrk ieslsvpvyq
      181 sygmtetvsh ialrklngen fsedyqflpn ivfgtdgrgc lhisgpvtng evvqtndlve
      241 iagdtfkwig radnvinsgg vkivldkvda tvgkvfydlk ignaffnwfv sdeklgqkli
      301 lvvegtantf qakdmieeir kslsayetpk hvyfvqhfnk tttdkvdkrr tvqqllasqn
      361 g
//
LOCUS       WP_235160739            1200 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Dyadobacter sp. CY351].
ACCESSION   WP_235160739
VERSION     WP_235160739.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 1200)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1200
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..1200
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=135256
     Region          29..523
                     /region_name="CHASE3"
                     /note="Extracytoplasmic sensor domain CHASE3 (specificity
                     unknown) [Signal transduction mechanisms]; COG5278"
                     /db_xref="CDD:444089"
     Region          45..171
                     /region_name="HK9-like_sensor"
                     /note="ligand binding sensor domain of Rhodopseudomonas
                     palustris histidine kinase HK9 and similar proteins;
                     cd19410"
                     /db_xref="CDD:438628"
     Site            order(45,48,58..59,62..63,65..66,69..70,150..151,153,156)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:438628"
     Region          <489..1195
                     /region_name="PRK11107"
                     /note="hybrid sensory histidine kinase BarA; Provisional"
                     /db_xref="CDD:236848"
     Region          811..>877
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
ORIGIN      
        1 mkktsnsiiq qlqivfsfsi lllifsllas yystqklinn selvnhtnqv lieaesiisf
       61 vkdaetgqrg ylitsdatfl dpyndayakt tnsynnlsel tadnpaqqkn lreikalyea
      121 kfgqmqyiid qtrrnsnfad dqngrlremv kgkkimddlr ltteriksee nkilqtrleq
      181 qqiyiqytpi llvvaalisi litvfaymri kndmdkrlal qlleeekyrt terrinrieq
      241 itrqvsegdy avrsqdesdd digrisaaln kmtasleqtf ndlntrnwmq tgmveisdai
      301 rgerilkkla anlietitry skahlgtiyi qdndwnfkla ssyatenape titpgaglag
      361 qvihskkpiv vydvpenylk vtstlgetkp aalailpliy ayecigviel aflskpdkle
      421 iqflegsles iatgvnsald ylrlqnflee tqaqseelqt qhnelenlna eleaqsqklq
      481 aseeelrvqq eelqqtneel eersglleek naeiqkkaee lelttrykse flanmshelr
      541 tplnsillls rllsendekn lsteqveyat viqssgngll glideildls kieagkmeld
      601 yvnvtvkeiv ddlkglfapv arekgldfvv diengvplvi etdkmrleqi lknlisnalk
      661 ftsqgsvrid ikrksgsenm lsfavtdtgi gvapekqlhi feafqqadgs tkrkyggtgl
      721 glsisrelvk llggeielss klnegsvftl sipvakafag nnsepktyfl nhseealktk
      781 pegndarfis tvipasiadd rdniqaadkt iliveddtmf akslldytrk qgykgivavr
      841 gdeglelaqt fkpmgilldi qlpilsgwev mdelkskpet rhipvhimss hrmknesllk
      901 gavdfidkpv afekmeeifk kiefvvskqs kkvlivedns mhakalayyl ssfninsqlk
      961 sdideglqal qnnevdcvil dmgipdkkay emlemakmnp sfehipiivf tgkslsmtee
     1021 lrikqyadsi vvktahsyqr mldevslflh vveeskkapq kasdrqklgg lseilqgktv
     1081 liadddvrni fslsksleny kmnvltaldg kealqrleen pdvdvvlldm mmpqmdgyet
     1141 arrirenyqw rnlpviavta kamtgdrekc inagasdyit kpvdidqlms llrvwlyeks
//
LOCUS       WP_235160704            1268 aa            linear   BCT 02-MAR-2025
DEFINITION  CotH kinase family protein [Dyadobacter sp. CY351].
ACCESSION   WP_235160704
VERSION     WP_235160704.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 1268)
  AUTHORS   Nguyen,K.B., Sreelatha,A., Durrant,E.S., Lopez-Garrido,J.,
            Muszewska,A., Dudkiewicz,M., Grynberg,M., Yee,S., Pogliano,K.,
            Tomchick,D.R., Pawlowski,K., Dixon,J.E. and Tagliabracci,V.S.
  TITLE     Phosphorylation of spore coat proteins by a family of atypical
            protein kinases
  JOURNAL   Proc Natl Acad Sci U S A 113 (25), E3482-E3491 (2016)
   PUBMED   27185916
REFERENCE   2  (residues 1 to 1268)
  AUTHORS   Zilhao,R., Naclerio,G., Henriques,A.O., Baccigalupi,L., Moran,C.P.
            Jr. and Ricca,E.
  TITLE     Assembly requirements and role of CotH during spore coat formation
            in Bacillus subtilis
  JOURNAL   J Bacteriol 181 (8), 2631-2633 (1999)
   PUBMED   10198031
REFERENCE   3  (residues 1 to 1268)
  AUTHORS   Naclerio,G., Baccigalupi,L., Zilhao,R., De Felice,M. and Ricca,E.
  TITLE     Bacillus subtilis spore coat assembly requires cotH gene expression
  JOURNAL   J Bacteriol 178 (15), 4375-4380 (1996)
   PUBMED   8755863
  REMARK    Erratum:[J Bacteriol. 1996 Nov;178(21):6407. doi:
            10.1128/jb.178.21.6407-6407.1996.. PMID: 8991897]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020337.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08757.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1268
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..1268
                     /product="CotH kinase family protein"
                     /calculated_mol_wt=136472
     Region          133..472
                     /region_name="CotH"
                     /note="CotH kinase protein; cl26696"
                     /db_xref="CDD:474846"
     Region          483..1096
                     /region_name="COG4935"
                     /note="Regulatory P domain of the subtilisin-like
                     proprotein convertases and other proteases
                     [Posttranslational modification, protein turnover,
                     chaperones]"
                     /db_xref="CDD:443962"
     Region          <620..695
                     /region_name="CBM6-CBM35-CBM36_like"
                     /note="Carbohydrate Binding Module 6 (CBM6) and CBM35_like
                     superfamily; cl14880"
                     /db_xref="CDD:449372"
     Region          <849..924
                     /region_name="CBM6-CBM35-CBM36_like"
                     /note="Carbohydrate Binding Module 6 (CBM6) and CBM35_like
                     superfamily; cl14880"
                     /db_xref="CDD:449372"
     Region          <1077..1149
                     /region_name="CBM6-CBM35-CBM36_like"
                     /note="Carbohydrate Binding Module 6 (CBM6) and CBM35_like
                     superfamily; cl14880"
                     /db_xref="CDD:449372"
     Region          1191..1266
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mmknlfyltl lwvvslgaha qipadnyrfy vdegrkmivc nqvptasqit gspiqmqfga
       61 kvftfsgsvt tltygvkylv tnggqqysly ftqlplvnld vpdpaqinle eeipggisia
      121 eatnsplisn mairirgnss sffpkknyrv qfkdaqgknk desilglrsd krwlffgmwn
      181 eelrstnnvs hnlwidmhkl yyassepsav ssirtryvev fmnksykgvy migedmdrkq
      241 lqlkkndgdv irgelfkadd wslsaawegi gvarpspgae ewqnweleyp dysdwnshqn
      301 llkgviessd defraniwtl fkqenvidyf iflnllsved nmeknyfigr ydkgqpwffi
      361 pwdldgawgy fpdgvrsnkt qgdrqnglfk klfrtnpdgf knklatryfe lrqnilaead
      421 lknrfqanyn llnsnliyer daavsqdnyg ganrsgglay vnnyitqrls wldayfcpmk
      481 dggcngqptc afditanasn tspacaanvs lstnctgtdc sgvtytwtgn ginqtgssin
      541 iaapgangsy vytvkasksg cadktatvtl nisncnppvg ndpfsaclea enqsgngpit
      601 gdpnasngst rgdkdnynhy vdyaingvka tgahqvkvry yanasaqasf svngnvvips
      661 asfpptyswn ivwreetfnv tlnqgnntlr iqglpgasir qdkicvtgpg gqnpqqptca
      721 fditanasnt npacsanvtl ssgctgadcs gvtytwtgng inqtgssini aapgangsyv
      781 ytvkaskngc adktatvtln itnctppvgg dpfsacleae nqsgngpitg dpnasngstr
      841 gdkdnynhyv dyavngvkat gshqvkvryy anaaaqasis vngnvilssa sfpptyswni
      901 vwreetfnvs lnqgnntlri qglpgasirq dkicvtgpgg qnpqqptcaf dvtanasntn
      961 pacsanvtls sgctgadcsg vtytwtgngi nqtgssinia apgangsyty tvkalkngca
     1021 dktatvtlni snctppvggd falcleselq agngaisgdp nasggstrgl kensnhyvdy
     1081 avngvpsagt yqlklrysas snpnisisvn sataiaaanl patyswnivf reevfnvtla
     1141 agnntvriqg lngpsirqdk acftssgqnn arlgapetml npggaderln vfpnpapgef
     1201 nakfnlsspd gatitvtdir grvwhtakik gtgkqeakik lpdapagvyl lqikngette
     1261 tkklvith
//
LOCUS       WP_235160785             107 aa            linear   BCT 02-MAR-2025
DEFINITION  type II toxin-antitoxin system RelE/ParE family toxin [Dyadobacter
            sp. CY351].
ACCESSION   WP_235160785
VERSION     WP_235160785.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 107)
  AUTHORS   Shinohara,M., Guo,J.X., Mori,M., Nakashima,T., Takagi,H.,
            Nishimoto,E., Yamashita,S., Tsumoto,K., Kakuta,Y. and Kimura,M.
  TITLE     The structural mechanism of the inhibition of archaeal RelE toxin
            by its cognate RelB antitoxin
  JOURNAL   Biochem Biophys Res Commun 400 (3), 346-351 (2010)
   PUBMED   20728434
REFERENCE   2  (residues 1 to 107)
  AUTHORS   Francuski,D. and Saenger,W.
  TITLE     Crystal structure of the antitoxin-toxin protein complex RelB-RelE
            from Methanococcus jannaschii
  JOURNAL   J Mol Biol 393 (4), 898-908 (2009)
   PUBMED   19712680
REFERENCE   3  (residues 1 to 107)
  AUTHORS   Li,G.Y., Zhang,Y., Inouye,M. and Ikura,M.
  TITLE     Inhibitory mechanism of Escherichia coli RelE-RelB toxin-antitoxin
            module involves a helix displacement near an mRNA interferase
            active site
  JOURNAL   J Biol Chem 284 (21), 14628-14636 (2009)
   PUBMED   19297318
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06296.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..107
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /calculated_mol_wt=12425
     Region          <45..>100
                     /region_name="COG4737"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:443771"
ORIGIN      
        1 mieitythef lreykrlakk yasletdvks lietlsanpt tgtplgsqif kirwqvkskr
       61 kgksggmrii tyfkilnnel flldiydkse retvslkdir ffvesik
//
LOCUS       WP_235160816             100 aa            linear   BCT 02-MAR-2025
DEFINITION  pyridoxal-phosphate dependent enzyme, partial [Pseudomonas
            viridiflava].
ACCESSION   WP_235160816
VERSION     WP_235160816.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas viridiflava
  ORGANISM  Pseudomonas viridiflava
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012512.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00291.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Pseudomonas viridiflava"
                     /db_xref="taxon:33069"
     Protein         <1..>100
                     /product="pyridoxal-phosphate dependent enzyme"
     Region          1..>100
                     /region_name="PRK09224"
                     /note="threonine ammonia-lyase IlvA"
                     /db_xref="CDD:236417"
ORIGIN      
        1 arelgikati vmprttpeik vegvrsrgat vvlhgdsfpe alayslklvd eqgfvyihpy
       61 ddpdtiagqg tvameilrqq pgqldaifvp vggggliagi
//
LOCUS       WP_235160887             201 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Pseudomonas viridiflava].
ACCESSION   WP_235160887
VERSION     WP_235160887.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas viridiflava
  ORGANISM  Pseudomonas viridiflava
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 201)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Pseudomonas viridiflava"
                     /db_xref="taxon:33069"
     Protein         1..201
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=21297
     Region          9..>194
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(27..28,31..32,35,38..39,41..42,45,48..49,52,55..56,
                     59..60,63,66..67,69..70,74,76..77,80,83..84,87..88,91,94,
                     97..98,101,105,108,115,119,122,125..126,129,132..133,
                     136..137,139..140,143..144,157..158,161,164..165,168,
                     171..172,174..175,178..179,182,185..186,189,192..193)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            97..130
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 mhdssgrlhr ivkfasvvtr qvaretevre aaglaydvsl qtdvsaerga svvqqtvqtm
       61 hkiawqmqaa tksiealgkq sliissivqt isgiaaqinl lalnaaieaa rageqgrgfa
      121 vvadevrqla srtssateei vsvvlqnrkl adqaieemas sqeqaeqgfa lasqageviv
      181 eiqggakevv tavrrfvnev s
//
LOCUS       WP_235160929             152 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2569 family protein [Escherichia coli].
ACCESSION   WP_235160929
VERSION     WP_235160929.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022214.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10754.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..152
                     /product="DUF2569 family protein"
                     /calculated_mol_wt=17794
ORIGIN      
        1 mmkenaemlq kekrpkfsiv lfiillsvvh ifitrlslag tfyslymslh egsqvkeyfi
       61 isigvfiils vlcmyfilsf frrkrhvnrl llyiyliyiv yyavsyvycf yvvggdytpd
      121 gsienifidg viavlfilyi ylskraksif ih
//
LOCUS       WP_235160968             617 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3300 domain-containing protein [Escherichia coli].
ACCESSION   WP_235160968
VERSION     WP_235160968.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023165.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11737.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..617
                     /product="DUF3300 domain-containing protein"
                     /calculated_mol_wt=69205
     Region          74..373
                     /region_name="DUF3300"
                     /note="Protein of unknown function (DUF3300); pfam11737"
                     /db_xref="CDD:463336"
     Region          396..>617
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     Region          <465..544
                     /region_name="DUF3106"
                     /note="Protein of unknown function (DUF3106); pfam11304"
                     /db_xref="CDD:463257"
ORIGIN      
        1 mkmtlpfkph vlalicsagl caastglyik srtveapvep qstqlavsda aavtfpatvs
       61 appvtpavvk safstaqidq wvapvalypd allsqvlmas typtnvaqav qwshdnplkq
      121 gdaaiqavsd qpwdasvksl vafpqlmalm genpqwvqnl gdaflaqpqd vmdsvqrlrq
      181 laqqtgslks steqkvittt kkavpvkqtv tapvipsntv ltanpvitep attvisiepa
      241 npdvvyipny nptvvygnwa ntayppvylp paagepfvds fvrgfgysmg vattyalfss
      301 idwddddhdh hhhdnddyhh hdgghrdgng wqhngdnini dvnnfnritg ehltdknmaw
      361 rhnpnyrngv pyhdqdmakr fhqtdvnggm satqlpaptr dsqrqaaanq fqqrthaapv
      421 itrdtqrqaa aqrfneaehy gsyddfhdfs rrqpltqqqk daarqryqsa speqrqavre
      481 rmqtnpkiqq rreaareriq saspeqrqav rekmqtnpqn qqrrdaarer iqsaspeqrq
      541 vfkekvqqrp lnqqqrdnar qrvqsaspeq rqvfrekvqe srpqrlndsn htvrlnneqr
      601 savcerlser garrler
//
LOCUS       WP_235161003             963 aa            linear   BCT 02-MAR-2025
DEFINITION  putative Ig domain-containing protein [Dyadobacter sp. CY351].
ACCESSION   WP_235161003
VERSION     WP_235161003.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 963)
  AUTHORS   Bentley,S.D., Maiwald,M., Murphy,L.D., Pallen,M.J., Yeats,C.A.,
            Dover,L.G., Norbertczak,H.T., Besra,G.S., Quail,M.A., Harris,D.E.,
            von Herbay,A., Goble,A., Rutter,S., Squares,R., Squares,S.,
            Barrell,B.G., Parkhill,J. and Relman,D.A.
  TITLE     Sequencing and analysis of the genome of the Whipple's disease
            bacterium Tropheryma whipplei
  JOURNAL   Lancet 361 (9358), 637-644 (2003)
   PUBMED   12606174
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017183.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05345.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..963
                     /product="putative Ig domain-containing protein"
                     /calculated_mol_wt=108408
     Region          65..>119
                     /region_name="GH113-like"
                     /note="Glycoside hydrolase family 113 beta-mannosidase and
                     similar proteins; cl16298"
                     /db_xref="CDD:449734"
     Region          490..575
                     /region_name="CA_like"
                     /note="Cadherin repeat-like domain; cl46864"
                     /db_xref="CDD:481204"
     Site            order(497..498,541,572,574..575)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206636"
     Region          583..664
                     /region_name="CADG"
                     /note="Dystroglycan-type cadherin-like domains;
                     smart00736"
                     /db_xref="CDD:214795"
     Region          688..759
                     /region_name="CADG"
                     /note="Dystroglycan-type cadherin-like domains;
                     smart00736"
                     /db_xref="CDD:214795"
     Region          883..960
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     cl46851"
                     /db_xref="CDD:481191"
ORIGIN      
        1 mhhstygskf ltklffvvla wtisfqtlha qtspgttead nqrylalmll nvldkdekgp
       61 eldlirsaha yglnavylti pwdkiyytsp tdkplwdkfd qqiktatdlg mkvalrihlg
      121 rhstrikgfw epsdshmsst gkpvisgyqd tsfgfdndai sakaqafvke tvtrykylqt
      181 nkqllfvsit ttgtqegeyp gsliengkes pavydysrsm itgfreflis hykklqrlny
      241 lwginhknfe evlppatpwe psesfrqrag kdwyiyrhlv lkrfteqmit avksvdpnvk
      301 fvsdygsvfd rissvrgtlg frslneksng ikinddlath dhrwsvdiik stapanfiia
      361 nelfintvfd nnahlrqine nfahganvva vvasvqstms raepflrqaa qtwlnqpmkp
      421 ivytdsvsyr lsaaveksgp mnvvydewrk rayadpnnpk pvyiglnedi lapeywddas
      481 nyppyvfkpv pmqiiavnkd fayklpidtf sdvdgtvvrm evgtlpswlk fengqlrgrp
      541 atlgdyriqv kgiddeggvt eafltvrvdt renankpptv dasfsnqtia vnepfslpin
      601 dgafedadge vtkieaselp gwlkfsngvl tgtppslgef rislkayddl nafvetyfti
      661 kvvekqflna ppyaagslpv kygqlnmpfn yilpteifgd pdgyissitl qnrpswlnfa
      721 lntfsgtpte egeyrliira ydnagayvev pfiliveipk frfelvqggs kvdqrvirkl
      781 tgddvlahsd lpsslniyah gnfdydkvdf sltgpynrks qtknfpfaly enasgfapyi
      841 grytltvtat kedsaivtns iqfsisygds initkdledw rffpnpvesv fnvklpagld
      901 andisyelit vsgkkidfpk efvtvsddla nidlsrlyis sgiyvvrlhs ngtvlkqfki
      961 fkk
//
LOCUS       WP_235161060             375 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Dyadobacter sp. CY351].
ACCESSION   WP_235161060
VERSION     WP_235161060.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 375)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 375)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..375
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=40956
     Region          5..355
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(58..59,161,164,185,189..190,321)
                     /site_type="active"
                     /note="inhibitor-cofactor binding pocket [active]"
                     /db_xref="CDD:99740"
     Site            order(58..59,83,161,164,185,190)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:99740"
     Site            190
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99740"
ORIGIN      
        1 mekkiwlspp hmggtemsyi qqafdtnwia pvganvdafe kqidefmgyg hvaalssgta
       61 alhlalvllg vtrgdfvicq sltfaasanp iiyqgatpif vdsepltwnl cpdalesaik
      121 hcvrkgrklk aiiivhlygm parmdeiltv chhhnipiie daaealgsay kgqkagslcr
      181 fgifsfngnk ilttsgggal wsedpmviqk akflatqard paphyahsvt gynyslsnic
      241 agigrgqmev leeriaqrra nyafyqqtls tlpglkfqne ppeclsnrwl taltldfqqt
      301 gispqtlvaa leckniesrh lwkpmhlqpl fkdapyfggt iagdlfrsgi clpsgsslae
      361 ddlqrvtqvi tnlfa
//
LOCUS       WP_235161079             250 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: polysaccharide deacetylase family protein
            [Dyadobacter].
ACCESSION   WP_235161079
VERSION     WP_235161079.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
REFERENCE   1  (residues 1 to 250)
  AUTHORS   Freiberg,C., Fellay,R., Bairoch,A., Broughton,W.J., Rosenthal,A.
            and Perret,X.
  TITLE     Molecular basis of symbiosis between Rhizobium and legumes
  JOURNAL   Nature 387 (6631), 394-401 (1997)
   PUBMED   9163424
REFERENCE   2  (residues 1 to 250)
  AUTHORS   Mishra,C., Semino,C.E., McCreath,K.J., de la Vega,H., Jones,B.J.,
            Specht,C.A. and Robbins,P.W.
  TITLE     Cloning and expression of two chitin deacetylase genes of
            Saccharomyces cerevisiae
  JOURNAL   Yeast 13 (4), 327-336 (1997)
   PUBMED   9133736
REFERENCE   3  (residues 1 to 250)
  AUTHORS   Millward-Sadler,S.J., Poole,D.M., Henrissat,B., Hazlewood,G.P.,
            Clarke,J.H. and Gilbert,H.J.
  TITLE     Evidence for a general role for high-affinity non-catalytic
            cellulose binding domains in microbial plant cell wall hydrolases
  JOURNAL   Mol Microbiol 11 (2), 375-382 (1994)
   PUBMED   8170399
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013672.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01522.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..250
                     /product="polysaccharide deacetylase family protein"
                     /GO_function="GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=28162
     Region          14..235
                     /region_name="CE4_SF"
                     /note="Catalytic NodB homology domain of the carbohydrate
                     esterase 4 superfamily; cl15692"
                     /db_xref="CDD:472828"
ORIGIN      
        1 mthcrrdaet hekagiaisf ddhfinewfa lrpmfrkyna kvtffitcpd sltadeiskl
       61 kilqadghei gfhgtihgks teliatgpds yknielapgl ahmaeagfkp tsyahpggnh
      121 narvdsvlla sgfkilrdva isrrkimgfq myalaprlmp wiyynfdner ivdallided
      181 sgltdpemqe alekakndnt almlfghepl ygkpqngeyg fhvpflekil keaarqnlkf
      241 ytmselpdrn
//
LOCUS       WP_235161192             585 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Dyadobacter sp. CY351].
ACCESSION   WP_235161192
VERSION     WP_235161192.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 585)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..585
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=66387
     Region          <194..566
                     /region_name="TMAO_torS"
                     /note="TMAO reductase sytem sensor TorS; TIGR02956"
                     /db_xref="CDD:274362"
ORIGIN      
        1 mnkstytnef nelwkkesel ksrwgniifc vaylvgypat silyflrkdp afpevlaael
       61 vlsgviifll tlhftgrlsa qkasfytnla lvpvhayila evphasydra slnmtlglmf
      121 sffvlrwpvh ysiiltvcvm tifppalyyr hpgylynffs qgglffflgq mlfpfmmyfh
      181 esrnkheffy lfslaeqndl lekqkqiaed atlaksefls tmsheirtpl ngivgivhll
      241 eenksrseee melietlkfs sihlmavvnd ildfnkinsn hvklhpvtfd ieelfknlyn
      301 sflprarekg lelsadlspn lpqlrgdqvr lsqvinnlih naikftdsgf vkfsvkeler
      361 tndgiiklef avsdtgigis edqqsnvfei ftqvrslvkr qdggtglgla isrelvrlfg
      421 gelrlksklg dgsvfsfqia lpysvtvedp aksekvstpa lnkgskvlvv ddnatnlifa
      481 tsllkrknip fdlasdgkqa vdkyfsdrfd lifmdlrmpv mdgfeatsmi rerdpqipiv
      541 altasafede reralangft dylvkpflpp dfykivyahi gienq
//
LOCUS       WP_235161262             487 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: M28 family peptidase [Dyadobacter].
ACCESSION   WP_235161262
VERSION     WP_235161262.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016289.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04389.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..487
                     /product="M28 family peptidase"
                     /calculated_mol_wt=53347
     Region          40..450
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     Region          250..453
                     /region_name="Iap"
                     /note="Zn-dependent amino- or carboxypeptidase, M28 family
                     [Posttranslational modification, protein turnover,
                     chaperones, Amino acid transport and metabolism]; COG2234"
                     /db_xref="CDD:441835"
ORIGIN      
        1 mkkivqvvli ggfivmfagf rpiekkwekp fsrldsevrk nskayqtlge atktighrlt
       61 gsvngekaee yafqllksyg ftdvafqpfe veawmrdtvt lsiapsssdn frevpvvsla
      121 hspvesklqg eivdvgngle edfeaikerv kgkvalanin lvgspgkknl hrsektalai
      181 kygatgvimv ngapgkillt gtasvtgaii sipavcisne sggelrkwlk eegpleahid
      241 mhniskpika rnviatlrgk tdekviiggh ldswdlatga idngigsfav mdiartfkal
      301 kvkpertiqf vlfmgeeqgl lgskhfvgel kksgeinkvs ymmnldmtnd pkgvnafgrd
      361 emneffagvg saiqhvdqsf knessnragl hsdhqpfmle gvpiaglsgh ldpnvlqcyh
      421 adcddfslvn kdqfentvri asmylyalan tetiavskls dtktrdflis qglkeelvig
      481 qewrweq
//
LOCUS       WP_235161280             295 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5777 family beta-barrel protein [Dyadobacter sp. CY351].
ACCESSION   WP_235161280
VERSION     WP_235161280.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040196.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19089.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..295
                     /product="DUF5777 family beta-barrel protein"
                     /calculated_mol_wt=33092
     Region          42..284
                     /region_name="DUF5777"
                     /note="Membrane bound beta barrel domain (DUF5777);
                     pfam19089"
                     /db_xref="CDD:436955"
ORIGIN      
        1 mkllrlmmml tcsttvlyaq ddllselskq dsmvtvpvsa tfkstrvvng hsietmkkkh
       61 ldfrishrfg rlnsgayqff gldqatmrmg feygvtddfm igvgrstsqk vydffgklkv
      121 lkqsdgarni pvsvtlfggt gvatvnkele fqdklyysaq vliarkfgdr lslqlsptfl
      181 hrnkpevfgd ekvllalgig grfklskrvs lngeyfytar ekntvtapyy dsmsfgvdie
      241 tgghvfqlhf tnslgmiekq figettgtwg kgdihygfni srtfsfdkkn kkvan
//
LOCUS       WP_235161375             868 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Dyadobacter sp. CY351].
ACCESSION   WP_235161375
VERSION     WP_235161375.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 868)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 868)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 868)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 868)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..868
                     /product="ATP-binding protein"
                     /calculated_mol_wt=97315
     Region          67..595
                     /region_name="KinA"
                     /note="Sporulation sensor histidine kinase A (Stage II
                     sporulation protein SpoIIF/SpoIIJ) [Cell cycle control,
                     cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG5805"
                     /db_xref="CDD:444507"
     Region          <347..824
                     /region_name="TMAO_torS"
                     /note="TMAO reductase sytem sensor TorS; TIGR02956"
                     /db_xref="CDD:274362"
ORIGIN      
        1 mltspatkyf rlyyagiylg lalifgsqyf tyrnvkdlsl nnerlnvtig vlnqtanfgl
       61 vtkdfqsnmr gflitenkdl ladnynkkvq lveisdtlfn lvksnpvqtq rvqellkisg
      121 divaytqnii tiyrtvsads afseikkgeg irlnsllnnq irqieqhehy nlnkrrqlvs
      181 ttqknseffi fatsgvgfll tlfaifflnr dkrkqhllqk elnekerlln qyleaipdgv
      241 mvvnqqkeiv llnqsgmeil giksrkietl eeevqqlvlr dptnyhvqft aetlpvargl
      301 agekltgnki dlikantiyh lesnvqpvvg idgeitsait vfrditeran yeatlekari
      361 laeksvrvkd iflsnvshei rtplnaitgf tnllvseltd pksleflgyi qyanknllel
      421 indildfski eagqvhlekg sasirdliks isaimrqrag ekgisyeail adnvpefiet
      481 dklrltqill nvcgnaikft etggvklrvt pvsdlvngvq tirfqvedtg igiekdklas
      541 vfnrfvqate sttrifggtg lglsivkslv elfdgkltlq sevgkgsvft ieiplriaeh
      601 aapeaeienv ddisktvssl hilaaednll nqkllsaife rmkipltivn ngleaiqsle
      661 kggfdivlmd iqmpvmdgyt aikeirqsis ktipiitmta hamigekeec lsigansyis
      721 kpfkeselly tiahlgnken nkktapahdq pltnntmtns ilnleylaei tggdrelrde
      781 lismfendsk iqlsaireas ktrdleqmrq aihkfrsslf svgllttanq ykdyeaklkq
      841 giwdeednrk llqleadstq glaelkml
//
LOCUS       WP_235161376             391 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Dyadobacter sp. CY351].
ACCESSION   WP_235161376
VERSION     WP_235161376.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..391
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=44358
     Region          18..389
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mdivitgqqa wdveigsnck nialefsksh rvlyvnapld ritamrhsad pkivrrlrvl
       61 qkqeggleev eknlwvlypd rmiesinwis fddifkmfna rnnrifvdsi aralkklgfe
      121 nvihfndndi frsfyikdyl kprlsvyysr dymigveywa khgaklepel iaksdicvan
      181 stylaayckq ynpntfyvgq gcdlelfssg igadepadia sipgprigyv galqnlrldl
      241 ellhyiavsr pawqlvlvgp eddvfkestl hqldnviftg sknaetlpay insfdvclnp
      301 qllnqltign yprkideyla lgkpvvatrt namdvfsdyv ylaenkeeyi vmiekalaed
      361 sgakaekrqa fahshswens vaeiykaina l
//
LOCUS       WP_235161378             393 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: glycosyltransferase [Dyadobacter].
ACCESSION   WP_235161378
VERSION     WP_235161378.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
REFERENCE   1  (residues 1 to 393)
  AUTHORS   Zhang,Y.L., Arakawa,E. and Leung,K.Y.
  TITLE     Novel Aeromonas hydrophila PPD134/91 genes involved in O-antigen
            and capsule biosynthesis
  JOURNAL   Infect Immun 70 (5), 2326-2335 (2002)
   PUBMED   11953367
  REMARK    Erratum:[Infect Immun 2002 Jun;70(6):3308]
REFERENCE   2  (residues 1 to 393)
  AUTHORS   Swartley,J.S., Liu,L.J., Miller,Y.K., Martin,L.E., Edupuganti,S.
            and Stephens,D.S.
  TITLE     Characterization of the gene cassette required for biosynthesis of
            the (alpha1-->6)-linked N-acetyl-D-mannosamine-1-phosphate capsule
            of serogroup A Neisseria meningitidis
  JOURNAL   J Bacteriol 180 (6), 1533-1539 (1998)
   PUBMED   9515923
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025025.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13641.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..393
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=44147
     Region          47..267
                     /region_name="Glyco_tranf_2_3"
                     /note="Glycosyltransferase like family 2; pfam13641"
                     /db_xref="CDD:433372"
ORIGIN      
        1 mmiigyiwll iqcvigfnli fpvtllliyt vrrsvkgrsk ntvttspdya vivtayeqtq
       61 qlpavvsafl kvrypnfhiy vvadkcdisn lhfgsdkvsl lrpetvlgsn trshfyairn
      121 firphshlti idsdnltdpg yldelnvyfs rgfhavqgvr daknldstya cldaardiyy
      181 hfydgkvlfg agssatlags gmaftvplyr eclehldvtg agfdkvlqea ivrrkyriaf
      241 aeravvydek ttgtdqlvkq rarwintwfk yfalgfgvff rglanfnwnq tlfglvllrp
      301 plfiflllsv lfmlinlfia pgialawfaa lctfvigfyi slkssatdpr iyqslvnipk
      361 fisfqilall kagkanqisv atkhgsgsqe rtl
//
LOCUS       WP_235161384             617 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: YfbK domain-containing protein [Dyadobacter].
ACCESSION   WP_235161384
VERSION     WP_235161384.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023459.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12034.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..617
                     /product="YfbK domain-containing protein"
                     /calculated_mol_wt=67777
     Region          24..92
                     /region_name="CarboxypepD_reg"
                     /note="Carboxypeptidase regulatory-like domain; pfam13620"
                     /db_xref="CDD:433354"
     Region          147..461
                     /region_name="YfbK"
                     /note="Secreted protein containing bacterial Ig-like
                     domain and vWFA domain [General function prediction only];
                     COG2304"
                     /db_xref="CDD:441879"
     Region          423..607
                     /region_name="DUF3520"
                     /note="Domain of unknown function (DUF3520); pfam12034"
                     /db_xref="CDD:432277"
ORIGIN      
        1 mkikivllli aalsafsmlq trkisgvvtn engipladvm vmvektlpht ktdslgryei
       61 qvpayaaslt fvipgytskk vtlgtsnvvn itfatgktdl tdvltksryp khkvtgivan
      121 memstatfav paqrhqplet enynpvneng fqiasqtpvt afsvdvdras ysntrrflns
      181 gqmppvdavr ieeminyfdy eyvgpsgahp iavstemtes pwnpglkllh iglqakhipm
      241 kelpasnlvf lidvsgsmsd qnklpllkqa fkllvdqlrp qdkvsivvya gaageilkpt
      301 sgsekmtike aldgleaggs taggegiela yklakdnflk ngnnrvilat dgdfnvgvss
      361 eaalqrliee krkegiflsi mgfgmgnykd shietladkg ngnyayidni qearkefiqe
      421 fggtlftvak dvkiqiefnp rhvkayrlig yenralknee fhddkkdage mgsghtvtal
      481 yeivpagses hylakndplk yqktdaseig ktdemltlki rykkpdsevs tlfdlpvkna
      541 skpfascsen lrfasavaef glllrnsefk gkadykdvla raktalgkde egyraefiql
      601 vktaealdgr kevvrrd
//
LOCUS       WP_235161399             571 aa            linear   BCT 02-MAR-2025
DEFINITION  GMC oxidoreductase [Dyadobacter sp. CY351].
ACCESSION   WP_235161399
VERSION     WP_235161399.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05199.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..571
                     /product="GMC oxidoreductase"
                     /GO_function="GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /calculated_mol_wt=63911
     Region          13..561
                     /region_name="BetA"
                     /note="Choline dehydrogenase or related flavoprotein
                     [Lipid transport and metabolism, General function
                     prediction only]; COG2303"
                     /db_xref="CDD:441878"
ORIGIN      
        1 manlnidavk eitydaivig sgvsggwaak eltekglkvl mlekgknleh vtgydnalka
       61 pwetqyngrl tvkqkethpf lsrdypynem tekywmndmd spyeekkrfd wfrpnivggk
      121 simwgrqsyr lsdidfeanl kdgiavdwpi rykdiapwys yvekhvgisg eklglpqlpd
      181 sdfippmdmy fvekevrkrl ekqfpgrtmt igrvanlsqp tkiqleggrs pcqyrnkcsl
      241 gcpygayfst qsstlppavk tglltlrpds vvreitydak sskatgvkvv dsvtlqekey
      301 faglifvcas algstavlln stsdrfpngm gndsgelghn lmdhhfrtga sgvwegdldk
      361 yyfgrrangi yvpryrnigs dkrdylrgfg yqggggrqgw qrnvaelafg adfkeelttp
      421 gnwtmgfggf getlpyheny mylnkdnkdk fgmpavvfda elrenekkmr vdmmndaaem
      481 leksglknvk thdngsylgm aihemgtarm grdpktsvln gnnqlhsvkn vfvtdgaamt
      541 sascvnpslt ymaltaravd favkeskkkn i
//
LOCUS       WP_235161503             527 aa            linear   BCT 02-MAR-2025
DEFINITION  SusD/RagB family nutrient-binding outer membrane lipoprotein
            [Dyadobacter sp. CY351].
ACCESSION   WP_235161503
VERSION     WP_235161503.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 527)
  AUTHORS   Koropatkin,N., Martens,E.C., Gordon,J.I. and Smith,T.J.
  TITLE     Structure of a SusD homologue, BT1043, involved in mucin O-glycan
            utilization in a prominent human gut symbiont
  JOURNAL   Biochemistry 48 (7), 1532-1542 (2009)
   PUBMED   19191477
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024181.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12771.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..527
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /calculated_mol_wt=57783
     Region          32..499
                     /region_name="SusD-like_2"
                     /note="Starch-binding associating with outer membrane;
                     pfam12771"
                     /db_xref="CDD:463695"
ORIGIN      
        1 mknlkkyiky glavalvtgc dtkqlhdlni npqalnevnl nfiftsaelg iasngttgdn
       61 ryidwrtnig mfsyaiqhla nsgggiapgd kytvnaetna apfeftyndq lkniaeilkq
      121 sgpggfaegk ykntreasri lrafsfarlt dlygnipyse ankgiegiff pkydtqdviy
      181 adllkeldea taalstsnpd egfkaadfiy ngdiarwkkw gyslmlrlam risnvdaaka
      241 atyvtkaaag gvftsnadnv wvkmadgpse wvnqngisra fdagdggqpt ylsatlvnfl
      301 kgsnpavatd ddprlmiisg gigsgtvitd pvkqkgmpng ydlamlekle nkkpvdvstt
      361 ysrinskmlq dsdpyqimny gevefllaea ierkigtgia gtakshyqag vkasmqmytp
      421 fdasltvsda aaakylttyp ygvtkpalem igeqmwvnkf fnwweawsdw rrtgfpkltp
      481 tnypgnvtgg tipvrlrypt nevagnpnyq tgatlpddft tkvwwdk
//
LOCUS       WP_235161425             452 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: acyl-CoA dehydrogenase family protein [Dyadobacter].
ACCESSION   WP_235161425
VERSION     WP_235161425.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
REFERENCE   1  (residues 1 to 452)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 452)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 452)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..452
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=49822
     Region          69..451
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(164,194,196,228,230,429..431,433,435)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mgflesfsdi rtllknidld algklskkvd lnrmmgvvsk mseedlgkml kfmeagsgkk
       61 kappvvngdf yelsatltge dreiqlkvrd fmeteirpia neywnkahfp mhiiplmakl
      121 nisgltykgy gcagksalle gfvamemarv dssistffgv hsglamgsiy lcgseeqkqh
      181 wlpimqrmei igafgltepe vgsgvagglt ttcerigdew vingqkkwig natfsditii
      241 wardladnqv kgfivkkenp gfvaekmqdk malrtvqnal itltdckvpe tdrlqnansf
      301 kdtanvlrmt ragvawqavg cgrgayelal kytlerkqfg rpiagfqlvq dllvtmlgdl
      361 tamqtlvyrl sqlqdsgvlt dehaslakvf stlrmrsivd harelfggng illeydiarf
      421 vadaeaiysy egtkeinsli vgraitgesa fv
//
LOCUS       WP_235161505             314 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Dyadobacter sp. CY351].
ACCESSION   WP_235161505
VERSION     WP_235161505.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024118.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12706.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..314
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=34675
     Region          11..313
                     /region_name="PDE1"
                     /note="cAMP phosphodiesterase [Signal transduction
                     mechanisms]; COG5212"
                     /db_xref="CDD:444071"
ORIGIN      
        1 mrilaflllt cfvsvcsaqn sfrvvplgvr gggddgnlsa ymvapvnsna yvcldagtvt
       61 ngiskalinr vfsvaadvvl rkyikaylis hphldhvsgm vinsvedtak niygteycie
      121 tlkshyfnwk swpnltnega spalkkysyk mlgedqevdi eqtemsvkif klshsnpyes
      181 taflirkgek yvlyfgdtgp deieksdkmq qvwkavaplv kakqlagvfl evsypnkqpd
      241 rqlyghltpk wlmkelnvls eisgagslkg lnviithmkp tadnesqiqa elasnnalgl
      301 nlifpeqgka felk
//
LOCUS       WP_235161556             442 aa            linear   BCT 02-MAR-2025
DEFINITION  CDP-glycerol glycerophosphotransferase family protein [Dyadobacter
            sp. CY351].
ACCESSION   WP_235161556
VERSION     WP_235161556.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 442)
  AUTHORS   Fitzgerald,S.N. and Foster,T.J.
  TITLE     Molecular analysis of the tagF gene, encoding
            CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase of
            Staphylococcus epidermidis ATCC 14990
  JOURNAL   J Bacteriol 182 (4), 1046-1052 (2000)
   PUBMED   10648531
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016357.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04464.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..442
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0047355 - CDP-glycerol
                     glycerophosphotransferase activity [Evidence IEA]"
                     /calculated_mol_wt=51312
     Region          <183..419
                     /region_name="Glyphos_transf"
                     /note="CDP-Glycerol:Poly(glycerophosphate)
                     glycerophosphotransferase; cl42225"
                     /db_xref="CDD:478041"
ORIGIN      
        1 mniihsglik rlgikydvyi mstmtrtael aeinkhfnlh lkliqvdfpr esawlcylrk
       61 iekalfayhf niitqtikyq neekwkglli rkllwilsll hitktalctl rrviitlssf
      121 sirlkpllay hfkgvisssp ldlresqvvn flgrhhvksl amiiswdnlt skglinadhn
      181 ctlvwndfmk neflhfysif klkppkvvat giprfdcyfq hrseayyera rrlfnvksgk
      241 fiiliatsan rhfpnqleii edvlqfarge nnvhvimrch paddanayah iareqfvtlw
      301 hpenlpatnh klfynwfpel dflhslaqml ricdvcvqfa stmkldaaac kkpvisiayd
      361 gkiplpyhqs vqrlydyahq vplnalqidk vvtnrqqlyn alktclqdtd hqeklaaiap
      421 fthftesesv dftakiiaew ld
//
LOCUS       WP_235161574             454 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor plug domain-containing protein [Dyadobacter
            sp. CY351].
ACCESSION   WP_235161574
VERSION     WP_235161574.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 454)
  AUTHORS   Oke,M., Sarra,R., Ghirlando,R., Farnaud,S., Gorringe,A.R.,
            Evans,R.W. and Buchanan,S.K.
  TITLE     The plug domain of a neisserial TonB-dependent transporter retains
            structural integrity in the absence of its transmembrane
            beta-barrel
  JOURNAL   FEBS Lett 564 (3), 294-300 (2004)
   PUBMED   15111112
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07715.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..454
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /calculated_mol_wt=51554
     Region          15..249
                     /region_name="Peptidase_M56"
                     /note="BlaR1 peptidase M56; pfam05569"
                     /db_xref="CDD:428523"
     Region          141..375
                     /region_name="MecR1"
                     /note="Signal transducer regulating beta-lactamase
                     production, contains metallopeptidase domain [Signal
                     transduction mechanisms]; COG4219"
                     /db_xref="CDD:443363"
     Region          386..>454
                     /region_name="OMP_RagA_SusC"
                     /note="TonB-linked outer membrane protein, SusC/RagA
                     family; TIGR04056"
                     /db_xref="CDD:274948"
ORIGIN      
        1 metllylakv nlfwvlfylt yrlllrnhtf fiwnriylvg slliafllpl vsfpeavvts
       61 kpaiyaaasl pymespepvs wlttwspilf alcavgslyl rsafvrsird vfvmirkddv
      121 mdlndvklvl lphnevgsfs ffkwlvmnrr dyeenfepil rhesvhihqm hsldivfiel
      181 lkivfwfnpv lwfykrslqe vheyladeha pdrdgyarfl vayafnapaa altnhffngp
      241 llksrikmiy knrngewlrs kylivlplic ivlvttaare rvvesieklt pavigqmive
      301 haklddlkaf dtpmeqpvae iaapkskksk vskkakvnfp ttsytsqipd tlpqtpakaa
      361 tfsnyryaan igpiakmdsf tkvggtisir gyngpgsnal iivdgvkqeq rgsmghhhik
      421 peqiesinvl knqsaidiyg negkdgviii ntkk
//
LOCUS       WP_235161607            1032 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Dyadobacter sp. CY351].
ACCESSION   WP_235161607
VERSION     WP_235161607.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024867.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13476.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..1032
                     /product="AAA family ATPase"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /GO_process="GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /calculated_mol_wt=118199
     Region          1..1025
                     /region_name="sbcc"
                     /note="exonuclease SbcC; TIGR00618"
                     /db_xref="CDD:129705"
ORIGIN      
        1 mipiylkikg lysyqteqei hfnaltdasl fgifgavgsg kssileaitf alygdterln
       61 skgddrtynm mnlrsdelai dfeciagkng dryrftvrgk rnsknfkdvk tfdrrgyvwq
      121 denwvplaen enaetiigls ydnfrrtiii pqgrfqefie lrdadrtrmm kelfqlekyd
      181 lsrnvgsltk qndlamsnvd gqltgvgevt gemvaaeekr reevrleiqk vseelriqte
      241 letafqklkl taekvrllqt qlqtleaerp vmlereamlk ifetcsihfk sildqkntln
      301 agiardqkiv ennkirldel trlaekqqgl ltrlqpqyek reelldtade lekiiqildn
      361 rvsaekrkea ltrgneqlke keasitrltk qkqekesene qrknalsdiq eiseikawft
      421 tcdaliekrq svkteaetlq aditaqqqml iakiddinak fqlnlaenat leafqqsiqt
      481 flthseaetr dknrellslh tklalhqyag aivdgepcpl cgsahhpavl hadhvvsehi
      541 kivesalatl saqekairts qapveriynq idnleklkat ikqrwtdakv qieaheklfv
      601 wnkfdkndra gfekhfteit knqseikead aaikalslki etenlektek iekplqslkd
      661 eilrfentvl tlagqlqkvn lrefedqpka ailekitafk ssykeitslf eksekdldgv
      721 qkekdvlsga qqtlkttlds sqrdlaelqi sveaqlrafn fesedqvksi lqkpiqiese
      781 rkaietfkya ldttsrdldn llkenteqqy dpeqhetvik aretltesln afrkeeggld
      841 rllkkmaedl akkaalltek arlqlrkehl ddltklfrss gfvdyassiy lqnliqaanh
      901 rfhqmthqql hlelgegnsf wvrdllnggh lrllktlsgg qkfqaalsla laladhihvr
      961 ngskhnfffl degfgsldkn alqtvfetlk slrkenrivg iishvedlqq eiqtylsiqe
     1021 teegsrivps wk
//
LOCUS       WP_235161609             463 aa            linear   BCT 02-MAR-2025
DEFINITION  S41 family peptidase [Dyadobacter sp. CY351].
ACCESSION   WP_235161609
VERSION     WP_235161609.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015531.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03572.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..463
                     /product="S41 family peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=51659
     Region          25..414
                     /region_name="Peptidase_S41_CPP_like"
                     /note="C-terminal processing peptidase-like; serine
                     protease family S41; cd07561"
                     /db_xref="CDD:143477"
     Region          <126..185
                     /region_name="cpPDZ_Deg_HtrA-like"
                     /note="permuted PDZ domain of Deg/high-temperature
                     requirement factor A (HtrA) family of housekeeping serine
                     proteases and related domains; cl49614"
                     /db_xref="CDD:483954"
     Site            order(331,356)
                     /site_type="active"
                     /note="Catalytic dyad [active]"
                     /db_xref="CDD:143477"
ORIGIN      
        1 mkiklflail ltsaavisck eknvdpatet etnqwiyenm kywyywnddm ttkpdytkdp
       61 asffesllyk ydatlrpdgd rfswiqesae eleaslggqs kasgmeyklt yfptgsqnvi
      121 gvvlyvlpes paakagfkrg difnsindqk ltgsnyskll nsqekltytl atlsaggvlt
      181 dgttkrditp vvlqedpvff dtlynigahr igyvvyhqfi pepyqadnkq ydkkldaift
      241 kfkdanvnal ivdlrynpgg yvssatnfas liakatasdi fyykeyntev tetnmkkfge
      301 tyfydkfask sqnignqlnd vvflvssrsa sasellingl kpymnvtlvg gktvgknvgs
      361 vtltdskkkv kwglqpivsk slnkdkksdy svgftpdiaa segnllypyg npkdpllgea
      421 lfkitgnriv rqknartvqe eedqeiisti srkaggsnmf ydk
//
LOCUS       WP_235161639            1052 aa            linear   BCT 02-MAR-2025
DEFINITION  prophage tail fiber N-terminal domain-containing protein
            [Escherichia coli].
ACCESSION   WP_235161639
VERSION     WP_235161639.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019996.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08400.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..1052
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
                     /calculated_mol_wt=104886
     Region          1..124
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
     Region          <439..537
                     /region_name="COG5301"
                     /note="Phage-related tail fiber protein [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:444101"
     Region          462..499
                     /region_name="Phage_fiber_2"
                     /note="Phage tail fibre repeat; pfam03406"
                     /db_xref="CDD:427282"
     Region          826..873
                     /region_name="Collar"
                     /note="Phage Tail Collar Domain; pfam07484"
                     /db_xref="CDD:429485"
ORIGIN      
        1 mavkisgvlk dgagkpvqnc tiqlkakrns ttvvvntlas enpdeagrys mdveygqysv
       61 illvegfpps hagtitvyed srpgtlndfl gamteddarp ealrrfelmv eevarnasav
      121 aqntaaakks asdagtsare aathatdaag saraastsag qaatsaqsas ssagtastka
      181 teasksaaaa essksaaats asaaktsetn aaasqksaat sasaattkas eaatsardaa
      241 askeaaksse tnasssassa assataagns akaaktsetn arssetaagq sasaaagskt
      301 aaassasaas tsagqasasa taagksaesa assastattk ageateqasa aarsasaakt
      361 setnakaset raessktaaa ssassaassa ssasaskdea trqasaakgs attasakate
      421 aavsataaaq skstaesaat raetaakrae diasavaled asttkkgivq lssatnstse
      481 tlaatpkavk aandnangrv psnrkvngka ltaditltpk digtlnsvti sfsggagwfk
      541 latvtmpqas sivyialigg agynvgsphq agiselvlra gngnpkgitg alwkrtavgl
      601 tnfawintsg dtydiyveig nyatsvnihw dctanasvsi ytsptysask pssvtggvvy
      661 tmysshqkpt psdigalptt ggtisgplsv tdgitgalkg nadtatklaa apkingvkfd
      721 gsadinltpe nigafarrst gayadsngav pwnaesgayn varsgdsyil vnfytgvgsc
      781 rtlqmkahyr nrglfyrssr dgygfeedwa evytsknlpp esypvgapip wpsdtvpsgy
      841 almqgqtfnk saypklaaay psgvipdmrg wtikgkpasg ravlsqeqdg ikshthsasa
      901 sstdlgtktt ssfdygtkst nntgahthsi sgtansagah qhkssgafgg pntsifpngy
      961 taisnpspwi msttsgsgqt rnagktssdg ahthslsgta assgahahtv gigahthsva
     1021 igshghtitv naagnaentv kniafnyivr la
//
LOCUS       WP_235161721            1864 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Dyadobacter sp. CY351].
ACCESSION   WP_235161721
VERSION     WP_235161721.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13191.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1864
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..1864
                     /product="AAA family ATPase"
                     /calculated_mol_wt=209855
     Region          84..>797
                     /region_name="COG3899"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443106"
     Region          1312..1461
                     /region_name="GAF"
                     /note="Domain present in phytochromes and cGMP-specific
                     phosphodiesterases; smart00065"
                     /db_xref="CDD:214500"
     Region          <1458..1861
                     /region_name="TMAO_torS"
                     /note="TMAO reductase sytem sensor TorS; TIGR02956"
                     /db_xref="CDD:274362"
ORIGIN      
        1 misipgyeiv seiykgtsha lykavrtvds spvtlkvatf qetsdlifga ferefstgyq
       61 rffnsvlnyt qktrfenkli lemepfdgla lehwlvrqrp lsqrieicia lvktleelhy
      121 aniihcdlqp ahflikpetl eikltnlspk seteleymsp eqsgrmnike dyrsdyyalg
      181 vafyriftgr lpfahsdpne lvhshiakqp ilpsvidpei pavvselvmr llekkpeary
      241 qttkgirhdl kasldfcpsg ratpfqarrf dtpgrfeipg rlygrepeiq nvlnafqras
      301 sknemvlvyg nsgigksslv aevqdiltcr galfatgkfe qyvenipfea vieafdqlit
      361 qisavdpeal rgwkcdimqa vgaygqvivd vipklefiig kqadvpplap veaqnrfinv
      421 ftnfinvftk kehplvifld dlqwadassl rflsrvmgsv egkylfiigs yrdnevpvnh
      481 plavtireme esganfrqlg lfplttgqis slisdtfscp rhiadtlaep issrtlgnpf
      541 finetlrsly kdglihfdqq drkwlwdaqs iidyadsgss qelltnkinr lsehakqalt
      601 caacigkefn lemlsalndk tpqetgedlk eaitenlvlv smekpktdrd rylfktrytf
      661 vhdqvqqaay allsdgrkqe lhldigyfml erlspheidn qlfsivnhln fgaeiidsds
      721 qkykiaqlnf dagkkakisa aysvaleyfr tgmrflsekd wndpemllrn lhteyaecay
      781 ltgdiaater ltatlldhak sveermnasq lriqalifsk nldgairlsl tvlaelgikf
      841 psvpnnfhil tayakskwhl rgmatedlan lpqmqdnrml aamrilqnit aiafvripll
      901 yplmvlkmvg msvrygnape saltyityga ivnaietrnp acyrfgktgl kllegvsnia
      961 ikertmlvfn ivsrssgehi shsleplkra fkvgielgdi eyctyassty sfflllsgkn
     1021 lnwvkdemiq fnhlpksisi dhisnqnepl iqivsnllge nndptllsgd yfnegnnysn
     1081 iltlsdktri facflykmil cyltrdhdkg lahaekaliy sqnvkgllfq plfcyyyall
     1141 nyavagnkss avthritgnk ykkmleewaq qvpvnfqhry tlvqaeharv ngkseqaavl
     1201 ydtavrlske ndysqdeala nelcgnfwme ksqpriglvy iqsaiecyqk wgceikvrql
     1261 keqfgeqlrl spdlsehgqp aktaggsigs sldistlmka staissevvf arlmeklmkf
     1321 aienagaqsg ffildwggkl yieasqsvsn dksdirqipl dgsglvpesi iehvfrtktd
     1381 vilndaksde qfsqdsiisg ndirsvlcip amnqgkivgv lylennlttg afthertell
     1441 kllsgqiavs iensilyenl ekkvavrtte iqvqkeeier qkmlveeksk fkeqffanms
     1501 heirtpmtai igmselifdt plsprqleya kgiryssenl laiindildy skieagkfsf
     1561 vqkpfhirdr mnrlgyilkv iaeekgigld isvaedvsdq lvgdplrlhq illnlagnav
     1621 kftdfgsvki evkrisaarg veellftvkd tgigiakekl qyifetftrl dedlnskqtg
     1681 tglglfiakr lveeqggemt vssqvqqgte fsfnlsfevc ggseaddned rddgvslsgt
     1741 rillvednlf nqvvaeetlk klipdvqivi adngqialqk lqehtfdivl mdvkmpvmdg
     1801 ykatraireg ekgrripila ftsnanpaea qkckeagmdd yitkpieakk lkarirrlla
     1861 gevv
//
LOCUS       WP_235161728             261 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF4097 family beta strand repeat-containing protein
            [Dyadobacter].
ACCESSION   WP_235161728
VERSION     WP_235161728.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024743.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13349.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..261
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /calculated_mol_wt=27592
     Region          <140..261
                     /region_name="YvlB"
                     /note="Uncharacterized conserved protein YvlB, contains
                     DUF4097 and DUF4098 domains [Function unknown]; COG3595"
                     /db_xref="CDD:442814"
ORIGIN      
        1 mkkillismg cllclaesia qtpeykakla nskdkkvtie maasqvkieg yagdeiviqt
       61 tsgyeapper akglkplyya gvdntgmgls vttdasgikv ekvtrkeaky tiriprqvsv
      121 lfqevnwqgg skiaisnmdg dleiktngan iqltsvtgpv vanttsgdvd vvfsalnqtk
      181 ptaissisge vdvtlpatak stmklrsing emytdfdlgt rntkdglskv gggsniegst
      241 ngggvemqln tisgniyirk k
//
LOCUS       WP_235161739             428 aa            linear   BCT 02-MAR-2025
DEFINITION  M1 family aminopeptidase [Dyadobacter sp. CY351].
ACCESSION   WP_235161739
VERSION     WP_235161739.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 428)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01433.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..428
                     /product="M1 family aminopeptidase"
                     /GO_function="GO:0008237 - metallopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=48134
     Region          <3..228
                     /region_name="PepN"
                     /note="Aminopeptidase N, contains DUF3458 domain [Amino
                     acid transport and metabolism]; COG0308"
                     /db_xref="CDD:440077"
     Region          <239..>330
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          352..421
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     cl46851"
                     /db_xref="CDD:481191"
ORIGIN      
        1 mgenliahel ahhwfgdkit cgnwehiwln egfathmasi yienkfpana tvyrnaqina
       61 itadpggsvr vddvnnpnri fsqrlsyykg shllymlrwi lsdavffsgv knylqdpala
      121 ygfattndlk shleavsgkd ltyfidqwfi gegypsykvq wfpegnnvqi kvsqttshas
      181 vgffklplpi lfqntgtgqq klvvvdhttn dqvflenlgf epnlvtfdpe kwlisknnvi
      241 tkssdplpvt fetvkvqclg dqpqliwtts eelnadhfei qkssnavnws kigsveaagn
      301 stdlkhytyt dyttqangdy yriaeqdmdg kvqysrilrn tcgtlqksdl iispnpvadl
      361 lhfrtngenr ggmnvsiyna dghlerlehv sqtnsnsinv samqhgvyil qvedvvsksi
      421 kavrfmke
//
LOCUS       WP_235161740             289 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ThuA domain-containing protein [Dyadobacter].
ACCESSION   WP_235161740
VERSION     WP_235161740.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
REFERENCE   1  (residues 1 to 289)
  AUTHORS   Ampomah,O.Y., Avetisyan,A., Hansen,E., Svenson,J., Huser,T.,
            Jensen,J.B. and Bhuvaneswari,T.V.
  TITLE     The thuEFGKAB operon of rhizobia and agrobacterium tumefaciens
            codes for transport of trehalose, maltitol, and isomers of sucrose
            and their assimilation through the formation of their 3-keto
            derivatives
  JOURNAL   J Bacteriol 195 (17), 3797-3807 (2013)
   PUBMED   23772075
REFERENCE   2  (residues 1 to 289)
  AUTHORS   Ampomah,O.Y., Jensen,J.B. and Bhuvaneswari,T.V.
  TITLE     Lack of trehalose catabolism in Sinorhizobium species increases
            their nodulation competitiveness on certain host genotypes
  JOURNAL   New Phytol 179 (2), 495-504 (2008)
   PUBMED   19086182
REFERENCE   3  (residues 1 to 289)
  AUTHORS   Jensen,J.B., Peters,N.K. and Bhuvaneswari,T.V.
  TITLE     Redundancy in periplasmic binding protein-dependent transport
            systems for trehalose, sucrose, and maltose in Sinorhizobium
            meliloti
  JOURNAL   J Bacteriol 184 (11), 2978-2986 (2002)
   PUBMED   12003938
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018038.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06283.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..289
                     /product="ThuA domain-containing protein"
                     /calculated_mol_wt=31304
     Region          <71..265
                     /region_name="COG3828"
                     /note="Type 1 glutamine amidotransferase (GATase1)-like
                     domain [General function prediction only]"
                     /db_xref="CDD:443040"
ORIGIN      
        1 mkrilkitll lalvsghifa qkivfiagpd shgkgehehq ggstllvksi qeglpgvnav
       61 llqsgwpkds avlndadaiv iyadgggdhl liphlaemdr ltkkgiglvm lhfslevpag
      121 evgnhvrdwi ggyfeinwsv npvweaafst fpdhpiangv kpfsitdewy yhmrfadgme
      181 nitpilqalp pestlkgkdg thsnnpgvre avltkkelqp vawalerpdg grgfgfsggh
      241 mhknwgndnf rkivlnaiaw takakipeqg ipsatpteaa lnaltkkld
//
LOCUS       WP_235161745             652 aa            linear   BCT 02-MAR-2025
DEFINITION  UbiA family prenyltransferase [Dyadobacter sp. CY351].
ACCESSION   WP_235161745
VERSION     WP_235161745.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013226.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01040.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..652
                     /product="UbiA family prenyltransferase"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /calculated_mol_wt=73286
     Region          18..270
                     /region_name="UbiA"
                     /note="UbiA prenyltransferase family; pfam01040"
                     /db_xref="CDD:460038"
     Region          293..652
                     /region_name="BH0617"
                     /note="Predicted naringenin-chalcone synthase [Secondary
                     metabolites biosynthesis, transport and catabolism];
                     COG3424"
                     /db_xref="CDD:442650"
ORIGIN      
        1 mgidgntikl lripfsfflm plflfaysqa dtvvhhhalf afliihlliy pasngynsyv
       61 dkdeesvggl ekppmptaal fyltmfldft aivlaflfvn tlfafclvly iaasrayssr
      121 qirlkrypvi gfltvvifqg aftyymsiag vsesalmlsr ehiyvllacs fqiagayplt
      181 qvyqhqqdlk dgvvtlsykl gyrgtflfta amfllcnvfy ylyftskglg mvfyiiqvff
      241 lpivlyfgyw fylvlkdrse anfrntmrmn wiaaicmnsc fiilivinri plsyisaiet
      301 avpehcysqe tltsfymnst editnkrkik ivagktgian rysviadfdk apedyqffnk
      361 tatllpeptl tqrmqlyqqh atklsisaik kidgfaemkg rlthlitvtc tglfapgldv
      421 elmreldlnp aiqrssvnfm gcnaaiialk nadaicrsqp rakvlivcte lctihfqkry
      481 nddyllsnli fgdgaaavlv taeagsdyah hveidafnsl ilhngyadma wqlsetgfim
      541 nltsyvpdli rknikpmlek iglapdafkh wavhpggkri vddfvaalel dkgclaatyd
      601 vlrnfgnmss ptvlfvlkqv letakpenig nrifaaafgp glsietmqlr yv
//
LOCUS       WP_235161783             321 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: beta-ketoacyl synthase chain length factor
            [Dyadobacter].
ACCESSION   WP_235161783
VERSION     WP_235161783.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13723.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..321
                     /product="beta-ketoacyl synthase chain length factor"
                     /calculated_mol_wt=34609
     Region          41..>168
                     /region_name="Ketoacyl-synt_2"
                     /note="Beta-ketoacyl synthase, N-terminal domain;
                     pfam13723"
                     /db_xref="CDD:433431"
ORIGIN      
        1 myyisaasti shqptfrnvg fsasieplqe ssallspdyk gfidagllrr mskilrmsva
       61 cakdcigqak ieqpdgiiig tglgclldte kflnnvitie gllpptafiq sthntmagqi
      121 slsignhgyn mthtqntisf enalvdamll ldenegnilv gaadeaidfl tnisenlhln
      181 ianpitsgas ffmlssnrne esvagikdsr aiglvkdits eindflrene lsaaeldlvl
      241 vsdvhrhdsd gvlsliqnlg idkskcvdyl tysgiyptts afavhlavdr mkadkslrnv
      301 lvcntliqsn lgltllqsie a
//
LOCUS       WP_235161810             142 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Dyadobacter sp. CY351].
ACCESSION   WP_235161810
VERSION     WP_235161810.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 142)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 142)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..142
                     /product="VOC family protein"
                     /calculated_mol_wt=15612
     Region          8..132
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 megningile salyfpdles asefykdlfg fevlisserl valsvagkqv lllfqeegsl
       61 kevqlptggf ipahdgkgpv hiafsidsgs igywkerlts rnidieseis fnqgyslyfy
      121 dtnkhlvela tpgiwnglge tf
//
LOCUS       WP_235161848             145 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: NUDIX domain-containing protein [Dyadobacter].
ACCESSION   WP_235161848
VERSION     WP_235161848.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..145
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=16358
     Region          1..118
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mnvrpsaiil qdervltlry cygdqevyal pggnpdpges lqaaldreln eelgvmsdin
       61 emvicgeviw keieketlhm ifhtkitgdp klnpvhttae emvwlpihel dkklmypnvg
      121 kqiqdfvtml tksghigvid qpyik
//
LOCUS       WP_235161853             252 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5672 family protein [Dyadobacter sp. CY351].
ACCESSION   WP_235161853
VERSION     WP_235161853.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039190.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18922.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..252
                     /product="DUF5672 family protein"
                     /calculated_mol_wt=28545
     Region          60..234
                     /region_name="DUF5672"
                     /note="Protein of unknown function (DUF5672); pfam18922"
                     /db_xref="CDD:465913"
ORIGIN      
        1 mksskskssv avvipvyksv mneneklslk qcmkvlgnyp vkivkpasld lnavteaypn
       61 ielvsfndaf fkdiaaynrl misidfyktf layeyiliyq ldayvfqdll lawcakgfdy
      121 vgapslhmpa ldalgagayq qfadalsthr vvfngglslr ripaiirylk iynavypawv
      181 gnedmlfsqe atrlipmklf lklpswheal gfafekspaa tyeimqhklp fgchaweryd
      241 pqfwsafisd nq
//
LOCUS       WP_235161720             416 aa            linear   BCT 02-MAR-2025
DEFINITION  styrene monooxygenase/indole monooxygenase family protein
            [Dyadobacter sp. CY351].
ACCESSION   WP_235161720
VERSION     WP_235161720.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 416)
  AUTHORS   Ukaegbu,U.E., Kantz,A., Beaton,M., Gassner,G.T. and Rosenzweig,A.C.
  TITLE     Structure and ligand binding properties of the epoxidase component
            of styrene monooxygenase
  JOURNAL   Biochemistry 49 (8), 1678-1688 (2010)
   PUBMED   20055497
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037663.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17885.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..416
                     /product="styrene monooxygenase/indole monooxygenase
                     family protein"
                     /calculated_mol_wt=45645
     Region          1..>62
                     /region_name="UbiH"
                     /note="2-polyprenyl-6-methoxyphenol hydroxylase and
                     related FAD-dependent oxidoreductases [Coenzyme transport
                     and metabolism, Energy production and conversion];
                     COG0654"
                     /db_xref="CDD:440419"
     Region          146..255
                     /region_name="Smoa_sbd"
                     /note="Styrene monooxygenase A putative substrate binding
                     domain; pfam17885"
                     /db_xref="CDD:436116"
ORIGIN      
        1 mrkiaimgag qsglhlairl lksgydvtii sersageifn gpptgatylf ndtlqlekel
       61 gldlwsdtay hstgfninfg mpdgnlalsi nsktskpgvs idqrlkfyqw iklfernggk
      121 fivsdttpsd llacteqfdl vvvssgkgpl aklfqrdeak strdkparkl lqlhinnfeh
      181 pgktkftsit ldavmgagei itapfyqkdd iqcsfmlves vpggpmdvfd dvksgseqlk
      241 kakkmirevl pwryeafana eiirddaflk gsfapvvrkp vvqlnstaav lgigdtviln
      301 dpivgqggnn atkmanayak aiiargdkpf dvawmnqtfd dfweyskhvn rfcdiflspp
      361 sphafdilaa asqnseiasd fvngfnhpps lfpwlddade arkyitskta slesva
//
LOCUS       WP_235161933             102 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6787 family protein [Dyadobacter sp. CY351].
ACCESSION   WP_235161933
VERSION     WP_235161933.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042899.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20584.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..102
                     /product="DUF6787 family protein"
                     /calculated_mol_wt=12029
     Region          19..97
                     /region_name="DUF6787"
                     /note="Family of unknown function (DUF6787); pfam20584"
                     /db_xref="CDD:466733"
ORIGIN      
        1 mieklkarwn vkngwdvivi livfactgfs vlyvkrglfy ilgvtedspa wlrwginiii
       61 ilplyqvill awgwiwgkfn ffwefekrmf srigsifkrk na
//
LOCUS       WP_235161957             153 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: glycine zipper domain-containing protein
            [Dyadobacter].
ACCESSION   WP_235161957
VERSION     WP_235161957.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024879.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13488.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..153
                     /product="glycine zipper domain-containing protein"
                     /calculated_mol_wt=15788
ORIGIN      
        1 mnklpisiis aaifmascns gtnkeaallk ekqfaidsmk hvmekkaivd smntvmanre
       61 aekkaeearv aeaknteava tstaapaerr kkgwnhtakg avvgagtgai tgalvnkkrg
      121 egalvgtlig agvgagtgal vdnsqkkkrr nnn
//
LOCUS       WP_235161961              89 aa            linear   BCT 02-MAR-2025
DEFINITION  SymE family type I addiction module toxin [Dyadobacter sp. CY351].
ACCESSION   WP_235161961
VERSION     WP_235161961.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 89)
  AUTHORS   Kawano,M., Aravind,L. and Storz,G.
  TITLE     An antisense RNA controls synthesis of an SOS-induced toxin evolved
            from an antitoxin
  JOURNAL   Mol Microbiol 64 (3), 738-754 (2007)
   PUBMED   17462020
REFERENCE   2  (residues 1 to 89)
  AUTHORS   Gerdes,K. and Wagner,E.G.
  TITLE     RNA antitoxins
  JOURNAL   Curr Opin Microbiol 10 (2), 117-124 (2007)
   PUBMED   17376733
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020421.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08845.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..89
                     /product="SymE family type I addiction module toxin"
                     /GO_component="GO:0005737 - cytoplasm [Evidence IEA]"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /GO_process="GO:0016070 - RNA metabolic process [Evidence
                     IEA]"
                     /calculated_mol_wt=10309
     Region          2..>79
                     /region_name="SymE_toxin"
                     /note="Toxin SymE, type I toxin-antitoxin system; cl07446"
                     /db_xref="CDD:385023"
ORIGIN      
        1 mtqeikstpp terhltvysk hvprawhqyv impeirlrgk wlldagfecg devtvrcfgn
       61 kleitlnplp epepapvrkr rfrrsevls
//
LOCUS       WP_235161973             409 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Dyadobacter sp. CY351].
ACCESSION   WP_235161973
VERSION     WP_235161973.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 409)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 409)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..409
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=45623
     Region          40..232
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(49,82,122,213,216)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(49,213,216)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(49,82,122)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
ORIGIN      
        1 mrktriaavf gyilflfstl pipslyaqtk pataftlkdg drvvflgssi fendfqygyl
       61 elalttrfad kgvtfrnlgw tgdnvwgegr stytnpptpy ehlmeditka qptvvflgyg
      121 gveaqdgqag lphfkeglnk lldkiealga qaillstipv vssdtaqrig qrnadlelys
      181 kaisevaaqr kkqfidiynp ilnaskkdsi ientvhlnel gyyhlattle kalgldaaka
      241 stavsiadnk advsngrslt pdkegvlarf avdnkylplp spksadwitd nartvrisgl
      301 kkgyyalfse ndqvasasak dwekgveikq gpqfakvaei rnmilkknel hffqyrplnq
      361 tyiigfrrye qgrhvkglee qnilikwleg qiilnsepke vvyelrkmd
//
LOCUS       WP_235161992             565 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Dyadobacter sp. CY351].
ACCESSION   WP_235161992
VERSION     WP_235161992.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024573.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13175.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..565
                     /product="AAA family ATPase"
                     /calculated_mol_wt=65689
     Region          5..>50
                     /region_name="COG4938"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443965"
     Region          10..489
                     /region_name="AAA_15"
                     /note="AAA ATPase domain; pfam13175"
                     /db_xref="CDD:433011"
     Region          309..559
                     /region_name="COG4938"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443965"
ORIGIN      
        1 mqthlkgfgl qnfrvfknyt wfdfapitil tgpnssgkss lnkalllmkd nlnkeselle
       61 kyitypithk fwfdynggdh nlssannsis qdsddpyisy ciplrnvfdr nhllvkfhqi
      121 vkekfvakyk endeiarlla msnfleilhl ngqvilgvnt nhsssiycdl pllldickni
      181 kielksivad nihyydysfs ditkilddft ntfcnirwtt knvnfndlyn nsgpfiqedi
      241 vydnlteevi hydknidqsm fvslvdgdfh kkigfllcqn derfqyykdi dsqfsnitss
      301 aiesfcnflk ivfgsndsks ivnlhlpnfr sihylpsikg anersyrskd nhilnslfrq
      361 yleryqvsei veeddlqrkf yykwfgkfgi slamnrndql dansylvngm shvdvgygit
      421 qiiaiiiril siaesgylhf fnpghvlile epeanlhpky qslladmffe aaetfniqfv
      481 iethseylir kvqyltakrq intedtviyy fhdpngipkd ekqvkkiqil edgslsddfg
      541 pgffdeaanw elelirlkns kyrnn
//
LOCUS       WP_235162015             671 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: fibronectin type III domain-containing protein
            [Dyadobacter].
ACCESSION   WP_235162015
VERSION     WP_235162015.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter
  ORGANISM  Dyadobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae.
REFERENCE   1  (residues 1 to 671)
  AUTHORS   Little,E., Bork,P. and Doolittle,R.F.
  TITLE     Tracing the spread of fibronectin type III domains in bacterial
            glycohydrolases
  JOURNAL   J Mol Evol 39 (6), 631-643 (1994)
   PUBMED   7528812
REFERENCE   2  (residues 1 to 671)
  AUTHORS   Bazan,J.F.
  TITLE     Structural design and molecular evolution of a cytokine receptor
            superfamily
  JOURNAL   Proc Natl Acad Sci U S A 87 (18), 6934-6938 (1990)
   PUBMED   2169613
REFERENCE   3  (residues 1 to 671)
  AUTHORS   Kornblihtt,A.R., Umezawa,K., Vibe-Pedersen,K. and Baralle,F.E.
  TITLE     Primary structure of human fibronectin: differential splicing may
            generate at least 10 polypeptides from a single gene
  JOURNAL   EMBO J 4 (7), 1755-1759 (1985)
   PUBMED   2992939
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012271.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00041.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Dyadobacter"
                     /db_xref="taxon:120831"
     Protein         1..671
                     /product="fibronectin type III domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=72982
     Region          72..>528
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          498..585
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(498,554,575)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(576..577,579..580)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          607..669
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mknrtfrhtf llllvcigtv llfpktslaq ramlranvvs yqqvdlswdr lpssvevfvv
       61 erkedgfgqr ftaisgnlsg ttfsyqdktv qenrtyiyrv tascdkscgg elnevrvttp
      121 lappanpsnl eafyisgrgm aitwvgnnsd gttfllerse ngggfnlltr vpysrslsyn
      181 dgtttvgnny cyrvkavnag gesgysnesc vsralpkpaa psglsatavs ssqidltwld
      241 nadnetgfel erssdgnnfs kladipanat sysntslptl tkfwyrilak naigssgfsn
      301 vaeattfdvp pgaptsltak tisssqinls wkdqatnear felerstdgt nfskiadiea
      361 nkttyentgl qpatkywyrv rsvngsgpsg fsniadattl dvapnapgrl satavshdqi
      421 nlewedvsgn etgfqidrst ngttftkiad laanvksyqn kdlssetkyh yriravnaig
      481 psaysnvada ttrkapipdk pknltatpvd ydlvqlkwat lssnattvii ersrkpdadf
      541 kqigsqaant tqfpdreild vydyyyrika vnsagaspys dvvkvaasqi itgtepqaqa
      601 nlifiydkil hitldrpstg qmtlyntrgm avksaalsqn mildlsqlpa giyiavlnge
      661 ktlvkqkvll y
//
LOCUS       WP_235162031            2113 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase [Escherichia coli].
ACCESSION   WP_235162031
VERSION     WP_235162031.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 2113)
  AUTHORS   de la Cruz,J., Kressler,D. and Linder,P.
  TITLE     Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and
            related families
  JOURNAL   Trends Biochem Sci 24 (5), 192-198 (1999)
   PUBMED   10322435
REFERENCE   2  (residues 1 to 2113)
  AUTHORS   Aubourg,S., Kreis,M. and Lecharny,A.
  TITLE     The DEAD box RNA helicase family in Arabidopsis thaliana
  JOURNAL   Nucleic Acids Res 27 (2), 628-636 (1999)
   PUBMED   9862990
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012492.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00270.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2113
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..2113
                     /product="DEAD/DEAH box helicase"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=238178
     Region          81..288
                     /region_name="DEXHc_Hrq1-like"
                     /note="DEAH-box helicase domain of Hrq1 and similar
                     proteins; cd17923"
                     /db_xref="CDD:350681"
     Site            order(105..112,148,234..235)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350681"
     Region          <998..>1126
                     /region_name="YprA"
                     /note="ATP-dependent helicase YprA, contains C-terminal
                     metal-binding DUF1998 domain [Replication, recombination
                     and repair]; COG1205"
                     /db_xref="CDD:440818"
     Region          1548..1638
                     /region_name="MZB"
                     /note="MrfA Zn-binding domain; pfam09369"
                     /db_xref="CDD:462776"
ORIGIN      
        1 mlpsvvsrqv adsvaaflra afplnsplfn genndnvsml eqflaqpetl lkgpylsaql
       61 pfrksdlpln ffpnltlpfp phahqarafq rlgsdapqpt lvatgtgsgk tecfmfplln
      121 hcagashagv kaiiiypmna latdqasrfa ktiasdpqlh gkvtvglfvg dseiepskkm
      181 saekvitckh tlresppdil ltnykmldyl lmrpgdqplw rynqpgslry lvvdelhtfd
      241 gaqgsdlacl vrrlkhhigv dnqrfacvgt satvgdelgq lldyaktifd qpftddavir
      301 edrytaaeyl qdyaiaysqy pgpeaasald pqsystpvay lngqiplwfp dsdlqlpddl
      361 esddgrekri algsllrrhs vmhvllhdlq ggilserecl enlqvmlaes adharrvlqs
      421 ilaliaqarl evpetehdrq krlqakkarp vlpfvqlrsq lwlremrrlv asvaktprlv
      481 faddvavedr ehylpvihcr dchatgwasl rhgqsvqlet dldgiyrqff ekgrsivlaf
      541 pdnnekavsg ahqklcptcl klnrqssvqc ghcghtellq vlipdmlker kdelefanec
      601 pycnskqgis ilgsraasls avmihqlygs qfnehkklit fsdsvqdaah rasfftartw
      661 plmirgqias vlgeketlpl dafaarvcqq trerspddah faanfiapnm qwlndyqtlk
      721 negklaensd lpelvslrld wevyseftlr arigrtleat gyavagvdkd rfnpaitalh
      781 qqlceelgde msgvsveqva hlalgviwyq rqagavmhpa fesyrrdgtt fmmtqkerts
      841 rympsigpkt rkpayasfek ingfhrliga ksnpswyqhw inrtlsngnn lfissvaetv
      901 lrrlftalki agvvkdfdtk greawglvps alvvsrdvvq lnfsccrevv rapadqgwqw
      961 rnapclslrc egrylevdnm atwrwenmdi arvqgaehtg llsredreat eksfyrgnqp
     1021 wninllsatp tlemgidvgd lstvllcsvp paqanylqri gragrkdgna lnitvaegnp
     1081 hdqfffeepl emmqgqvqap gvflnatail erqlaafcmd nwvktgvpes aicknvkqml
     1141 delefgrksg fpynllryie qhhaeiaaqf taifpdlaae trqqllsylq gapgqrslvq
     1201 rieealkllv edrkslrsri dklkrsidkl enaprdqnfd sdmreltser qalmalvnqi
     1261 nnkqtlnflt degllpnyaf peagitlrsv lwrrkeggea reyqnttfey erpastalae
     1321 laplnnfyag ghkveieqid lkvsepenwr icshcnysen idqtgdqhky cpkcgtpgwa
     1381 dagqkttllk lrqvyarasa rdsqisdesd srepaffqrq llvsfekedv saayaieege
     1441 vpfgfeflsk vtlrdinfgk maddanelmi ageakkrtgf kvclgcgmvq rprdheprhd
     1501 lsckyrtepe kakfedylyl yrqlesealr illpvssysn drvveaslga aiqlglkhyf
     1561 kgnvdhlkgv vyrepenege swrqylviyd tvpggtgslk elmrtpdnll kllelayqai
     1621 vecscnndth kdgcyrcvya yrdrgrmkyv srdqarllla kilqardsir vidsiknisl
     1681 eammgselek rfisclqenk nlivsrsyah qgagwiintr sepmmswhlk aqvdlgakea
     1741 vgipcrpdyv lyplmqsdai kpvvifldgf afhknsvaed vqkrqairds gnfwvwtvtw
     1801 adlkepglkh vqdvlglghn pdmkqpkfyn lfhdtnfaal easfrernsf allldyladp
     1861 ggrtqlwqrm aaahawvwld vkksqdagtk qkyayemqen apawrlaell pdepfvfggl
     1921 ldscnssqqf ielasvlpqq aikpttsvaq mrswlrlhic fddrytqddg yeaglngfwr
     1981 lvnllqflpd mtftsrkavh lpqesvdtkv satpeavpet deswaeiief gllsaeeial
     2041 lqshslsapt lgyelqndeg eiiaeadlaw psqkwaliid nqefiplftt rgwhvafgpi
     2101 dentlqhlsg gdk
//
LOCUS       WP_235162090             111 aa            linear   BCT 02-MAR-2025
DEFINITION  cysteine peptidase family C39 domain-containing protein
            [Escherichia coli].
ACCESSION   WP_235162090
VERSION     WP_235162090.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 111)
  AUTHORS   Havarstein,L.S., Diep,D.B. and Nes,I.F.
  TITLE     A family of bacteriocin ABC transporters carry out proteolytic
            processing of their substrates concomitant with export
  JOURNAL   Mol Microbiol 16 (2), 229-240 (1995)
   PUBMED   7565085
REFERENCE   2  (residues 1 to 111)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015377.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03412.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..111
                     /product="cysteine peptidase family C39 domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=12382
     Region          1..109
                     /region_name="Peptidase_C39_like"
                     /note="Peptidase family C39 mostly contains
                     bacteriocin-processing endopeptidases from bacteria. The
                     cysteine peptidases in family C39 cleave the
                     'double-glycine' leader peptides from the precursors of
                     various bacteriocins (mostly non-lantibiotic). The
                     cleavage...; cd02259"
                     /db_xref="CDD:239073"
ORIGIN      
        1 mllrdryifv tqnvigtelt smtslankln kfdvgwegna vsesslyals ntvswgamiw
       61 dsgskvghwv lvkgvddagn viiydpyqgs rylmteqefk evwnghsvyk p
//
LOCUS       WP_235162203              53 aa            linear   BCT 02-MAR-2025
DEFINITION  AraC family transcriptional regulator, partial [Escherichia coli].
ACCESSION   WP_235162203
VERSION     WP_235162203.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 53)
  AUTHORS   Saviola,B., Seabold,R. and Schleif,R.F.
  TITLE     Arm-domain interactions in AraC
  JOURNAL   J Mol Biol 278 (3), 539-548 (1998)
   PUBMED   9600837
REFERENCE   2  (residues 1 to 53)
  AUTHORS   Seabold,R.R. and Schleif,R.F.
  TITLE     Apo-AraC actively seeks to loop
  JOURNAL   J Mol Biol 278 (3), 529-538 (1998)
   PUBMED   9600836
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012392.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00165.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..53
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..53
                     /product="AraC family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
     Region          <1..53
                     /region_name="PRK13500"
                     /note="HTH-type transcriptional activator RhaR"
                     /db_xref="CDD:184091"
ORIGIN      
        1 vchaqyllqh srllisdist ecgfedsnyf svvftretgm tpsqwrhlns qkd
//
LOCUS       WP_235162215            1008 aa            linear   BCT 02-MAR-2025
DEFINITION  prophage tail fiber N-terminal domain-containing protein
            [Escherichia coli].
ACCESSION   WP_235162215
VERSION     WP_235162215.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019996.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08400.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..1008
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
                     /calculated_mol_wt=100578
     Region          1..134
                     /region_name="phage_tail_N"
                     /note="Prophage tail fibre N-terminal; pfam08400"
                     /db_xref="CDD:285585"
     Region          <439..538
                     /region_name="COG5301"
                     /note="Phage-related tail fiber protein [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:444101"
     Region          798..845
                     /region_name="Collar"
                     /note="Phage Tail Collar Domain; pfam07484"
                     /db_xref="CDD:429485"
ORIGIN      
        1 mavkisgvlk dgtgkpvqnc tiqlkakrns ttvvvntlas enpdeagrys mdveygqysv
       61 illvegfpps hagtitvyed sqpgtlndfl gamteddarp ealrrfelmv eevarnasvv
      121 aqntaaakks agdastsare aathatdaad saraastsag qaassaqsas ssagtastka
      181 teasksaaaa essksvaats agaaktsetn aaaseqsaat sastattkas eaatsardaa
      241 askeaaksse tnaslsassa assataagns akaaktsetn arssetaagq sasaaagskt
      301 aaassasaas tsagqasasa taagksaesa assastattk ageateqata aarsasaakt
      361 setnakaset raessktaaa ssassaassa ssasaskdea trqasaakgs attastkate
      421 aagsakaaaq skstaesaat raetaakrae diasavaled asttkkgivq lssatnstse
      481 slaatpkavk aaydlangky taqdattaqk giiqlssatn stsetlaatp kavkaandna
      541 ekrlqkdqng adipgkdtft knigacrafg gsvstttgnw ttaqfiewld sqgafnhpyw
      601 mckgscsygn nkiitdtgcg nihlagavie vmgiksamti rittpttssg ggttnaqfty
      661 inhgtdyspg wrrdynsrnk ptaseigalp sggtavssvn laskgrvaal tdntqgaagl
      721 elyevynngy pttygniihl kgmtavgege lligwsgtsg ahapafirsr rdttdanwsp
      781 waqlytsahp paefypvgap ipwpsdtvps gyalmqgqtf dksaypklaa aypsgvipdm
      841 rgwtikgkpa sgravlsqeq dgikshthsa sasstdlgtk ttssfdygtk stnnigahth
      901 svsgtaasag nhthsvtgas avsqwsqngs vhkvvsaasv ntsaagahth svsgtaasag
      961 ahahtvgiga hthsvaigsh ghtitvnaag naentvknia fnyivrla
//
LOCUS       WP_235162268              82 aa            linear   BCT 02-MAR-2025
DEFINITION  phage portal protein, partial [Escherichia coli].
ACCESSION   WP_235162268
VERSION     WP_235162268.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016991.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05136.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>82
                     /product="phage portal protein"
                     /GO_function="GO:0005198 - structural molecule activity
                     [Evidence IEA]"
                     /GO_process="GO:0019068 - virion assembly [Evidence IEA]"
     Region          <13..>82
                     /region_name="Phage_portal_2"
                     /note="Phage portal protein, lambda family; cl19194"
                     /db_xref="CDD:473148"
ORIGIN      
        1 linilekfss wydtnsvtlg gvkiphlfpg ddlklqtaqd sdngfsaleq allryiaagl
       61 gvsyeqlsrd yskvsyssar as
//
LOCUS       WP_235162272             124 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4113 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235162272
VERSION     WP_235162272.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024830.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13438.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..124
                     /product="DUF4113 domain-containing protein"
     Region          <1..122
                     /region_name="PolY"
                     /note="Y-family of DNA polymerases; cl28996"
                     /db_xref="CDD:452909"
ORIGIN      
        1 kepcysnaav eklslptqds rdiiaaacra lnhvwregyr ymkagvmlad ftpsgiaqpg
       61 lfdeiqphkn seklmktlde lnqsgkgkvw fagrgtapew qmkremlsqc yttkwrdipl
      121 arlg
//
LOCUS       WP_235162296             240 aa            linear   BCT 02-MAR-2025
DEFINITION  phage antirepressor KilAC domain-containing protein [Escherichia
            coli].
ACCESSION   WP_235162296
VERSION     WP_235162296.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 240)
  AUTHORS   Iyer,L.M., Koonin,E.V. and Aravind,L.
  TITLE     Extensive domain shuffling in transcription regulators of DNA
            viruses and implications for the origin of fungal APSES
            transcription factors
  JOURNAL   Genome Biol 3 (3), RESEARCH0012 (2002)
   PUBMED   11897024
REFERENCE   2  (residues 1 to 240)
  AUTHORS   Heinrich,J., Velleman,M. and Schuster,H.
  TITLE     The tripartite immunity system of phages P1 and P7
  JOURNAL   FEMS Microbiol Rev 17 (1-2), 121-126 (1995)
   PUBMED   7669337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015340.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03374.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..240
                     /product="phage antirepressor KilAC domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=26771
     Region          5..235
                     /region_name="KilAC"
                     /note="Phage antirepressor protein YoqD, KilAC domain
                     [Mobilome: prophages, transposons]; COG3645"
                     /db_xref="CDD:442862"
ORIGIN      
        1 mnelinsnvi kmtsieisel tgkrhdnvkr tiemlakngv irhpqiedcg ringlglnqs
       61 frvyvfegeq gkrdsiivva qlspeftarl vdrwreleda avnipktlpe alrlaadlae
      121 qkmqlenqla iaapkvefad rvgeasgili gnyakvvgig pnklfawmre hkiliasgsr
      181 rnvpmqeymd rgyftvkete vntnhgiqis fttkitgrgq qwltrklldn gmlkvtgeaa
//
LOCUS       WP_235161540             281 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase family 92 protein [Dyadobacter sp. CY351].
ACCESSION   WP_235161540
VERSION     WP_235161540.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter sp. CY351
  ORGANISM  Dyadobacter sp. CY351
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 281)
  AUTHORS   Hansen,S.F., Harholt,J., Oikawa,A. and Scheller,H.V.
  TITLE     Plant Glycosyltransferases Beyond CAZy: A Perspective on DUF
            Families
  JOURNAL   Front Plant Sci 3, 59 (2012)
   PUBMED   22629278
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 281)
  AUTHORS   Suzuki,N. and Yamamoto,K.
  TITLE     Molecular cloning of pigeon UDP-galactose:beta-D-galactoside
            alpha1,4-galactosyltransferase and UDP-galactose:beta-D-galactoside
            beta1,4-galactosyltransferase, two novel enzymes catalyzing the
            formation of Gal alpha1-4Gal beta1-4Gal beta1-4GlcNAc sequence
  JOURNAL   J Biol Chem 285 (8), 5178-5187 (2010)
   PUBMED   19959475
REFERENCE   3  (residues 1 to 281)
  AUTHORS   Titz,A., Butschi,A., Henrissat,B., Fan,Y.Y., Hennet,T.,
            Razzazi-Fazeli,E., Hengartner,M.O., Wilson,I.B.H., Kunzler,M. and
            Aebi,M.
  TITLE     Molecular basis for galactosylation of core fucose residues in
            invertebrates: identification of caenorhabditis elegans N-glycan
            core alpha1,6-fucoside beta1,4-galactosyltransferase GALT-1 as a
            member of a novel glycosyltransferase family
  JOURNAL   J Biol Chem 284 (52), 36223-36233 (2009)
   PUBMED   19858195
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013830.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01697.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Dyadobacter sp. CY351"
                     /db_xref="taxon:2909337"
     Protein         1..281
                     /product="glycosyltransferase family 92 protein"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=32134
     Region          37..267
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
ORIGIN      
        1 mfsikklisk frgadqhpqv hqydlslcci vkdennylee wigyhrkigv qhfyiydngs
       61 kvpirtalaa inapadvtvi dmpgknkhvk ayqhcldrfg gsstwigfid idefivpkta
      121 ssnlpeflkn yenygglgvs wlifgsnghv qkpggpqlen ftkrsevtfp pnrhiksivq
      181 prfvksayks hcfhykpgyf cvnehyiaid gatadvsvdk iqlnhyycrs leeyhekver
      241 gisdtkrkrk leefhnhdiq anviedttil evveklnnsv n
//
LOCUS       WP_235162322              96 aa            linear   BCT 02-MAR-2025
DEFINITION  complement resistance protein TraT, partial [Escherichia coli].
ACCESSION   WP_235162322
VERSION     WP_235162322.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 96)
  AUTHORS   Chang,H.J., Sheu,S.Y. and Lo,S.J.
  TITLE     Expression of foreign antigens on the surface of Escherichia coli
            by fusion to the outer membrane protein traT
  JOURNAL   J Biomed Sci 6 (1), 64-70 (1999)
   PUBMED   9933744
REFERENCE   2  (residues 1 to 96)
  AUTHORS   Jalajakumari,M.B., Guidolin,A., Buhk,H.J., Manning,P.A., Ham,L.M.,
            Hodgson,A.L., Cheah,K.C. and Skurray,R.A.
  TITLE     Surface exclusion genes traS and traT of the F sex factor of
            Escherichia coli K-12. Determination of the nucleotide sequence and
            promoter and terminator activities
  JOURNAL   J Mol Biol 198 (1), 1-11 (1987)
   PUBMED   3323526
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017619.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05818.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     gene            <1..>96
                     /gene="traT"
     Protein         <1..>96
                     /product="complement resistance protein TraT"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
     Region          <1..>96
                     /region_name="TraT"
                     /note="Enterobacterial TraT complement resistance protein;
                     cl19728"
                     /db_xref="CDD:450348"
ORIGIN      
        1 davkakgyqv vtspdkayyw iqanvlkadk mdlresqgwl nrgyegaavg aalgagitgy
       61 nsnsagatlg vglaaglvgm aadamvedvn ytmitd
//
LOCUS       WP_235162308             534 aa            linear   BCT 02-MAR-2025
DEFINITION  RecE family exodeoxyribonuclease, partial [Escherichia coli].
ACCESSION   WP_235162308
VERSION     WP_235162308.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 534)
  AUTHORS   Mahajan,S.K., Chu,C.C., Willis,D.K., Templin,A. and Clark,A.J.
  TITLE     Physical analysis of spontaneous and mutagen-induced mutants of
            Escherichia coli K-12 expressing DNA exonuclease VIII activity
  JOURNAL   Genetics 125 (2), 261-273 (1990)
   PUBMED   2199308
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018353.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06630.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>534
                     /product="RecE family exodeoxyribonuclease"
                     /GO_function="GO:0051908 - double-stranded DNA 5'-3' DNA
                     exonuclease activity [Evidence IEA]"
                     /GO_process="GO:0090304 - nucleic acid metabolic process
                     [Evidence IEA]"
     Region          1..>532
                     /region_name="PRK09709"
                     /note="exodeoxyribonuclease VIII"
                     /db_xref="CDD:236615"
ORIGIN      
        1 mstdkeefal yceakndkvr krlgikggfy wttakklsva isrcitamdd ndydeddfkk
       61 pvrvhlpvvn dlppegvfdt efcnryekgg edgitmvfia pspsvqekpa stdntnvnge
      121 dmteieenml lpvsgqelpi rwlaqhgsek pvthvareel qalhiaraee lpavtalais
      181 hntklldple irdlhklard tdkvfpnpgn sdlglitaff eayldadytd rglltkewmk
      241 gnrvsritrt asganagggn ktdrnpnlvh tfdtldveia aatlpmdfni yeipgsvyrr
      301 akeivlkres pfkewsaalr atpgildysr aaifalirsa hpefyhypgr lqgyinaylt
      361 etdhenpske tltaarhtpe kdileevnre laakqeteee endeekpqps camadeqata
      421 etvepdateh hqdtqpldaq sqvnsvdaky qklraelhea rknippqnpv dadkllaasr
      481 gefvegisdp ndpkwikgiq trdsvyqnqp eteqndqkae qnspntqqne petk
//
LOCUS       WP_235162340              21 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF551 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235162340
VERSION     WP_235162340.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016343.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04448.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..21
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..21
                     /product="DUF551 domain-containing protein"
     Region          <2..17
                     /region_name="DUF551"
                     /note="Protein of unknown function (DUF551); pfam04448"
                     /db_xref="CDD:427954"
ORIGIN      
        1 tqsrnvtdwm plpeppqevr q
//
LOCUS       WP_235162363              42 aa            linear   BCT 02-MAR-2025
DEFINITION  bacteriophage antitermination protein Q, partial [Escherichia
            coli].
ACCESSION   WP_235162363
VERSION     WP_235162363.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 42)
  AUTHORS   Goliger,J.A. and Roberts,J.W.
  TITLE     Bacteriophage 82 gene Q and Q protein. Sequence, overproduction,
            and activity as a transcription antiterminator in vitro
  JOURNAL   J Biol Chem 262 (24), 11721-11725 (1987)
   PUBMED   3624233
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018074.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06323.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..42
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..42
                     /product="bacteriophage antitermination protein Q"
ORIGIN      
        1 trhwvamkhi fhrldseall fvmrtrskqk aafskqsvak vd
//
LOCUS       WP_235162386              56 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF987 family protein, partial [Escherichia coli].
ACCESSION   WP_235162386
VERSION     WP_235162386.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017938.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06174.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..56
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..56
                     /product="DUF987 family protein"
     Region          <1..48
                     /region_name="DUF987"
                     /note="Protein of unknown function (DUF987); pfam06174"
                     /db_xref="CDD:368775"
ORIGIN      
        1 asrlfpfctg kyrwhgstea ytgrevqdip gvlavfaerh kdsfgpyvrl msvtln
//
LOCUS       WP_235162407             106 aa            linear   BCT 02-MAR-2025
DEFINITION  Tn3 family transposase, partial [Escherichia coli].
ACCESSION   WP_235162407
VERSION     WP_235162407.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 106)
  AUTHORS   Yurieva,O. and Nikiforov,V.
  TITLE     Catalytic center quest: comparison of transposases belonging to the
            Tn3 family reveals an invariant triad of acidic amino acid residues
  JOURNAL   Biochem Mol Biol Int 38 (1), 15-20 (1996)
   PUBMED   8932514
REFERENCE   2  (residues 1 to 106)
  AUTHORS   Fennewald,M.A., Gerrard,S.P., Chou,J., Casadaban,M.J. and
            Cozzarelli,N.R.
  TITLE     Purification of the Tn3 transposase and analysis of its binding to
            DNA
  JOURNAL   J Biol Chem 256 (10), 4687-4690 (1981)
   PUBMED   6262296
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013676.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01526.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..106
                     /product="Tn3 family transposase"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <1..94
                     /region_name="DDE_Tnp_Tn3"
                     /note="Tn3 transposase DDE domain; cl46769"
                     /db_xref="CDD:481109"
ORIGIN      
        1 araiflhqlg efrnraaetm ahrasglnlv vnaiilwntv ylsravdyir sqgiiipeel
       61 lssvsplpwg hisltgdylw neidhplery rplrtnrfnp knftfp
//
LOCUS       WP_235162408             113 aa            linear   BCT 02-MAR-2025
DEFINITION  S49 family peptidase, partial [Escherichia coli].
ACCESSION   WP_235162408
VERSION     WP_235162408.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013506.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01343.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>113
                     /product="S49 family peptidase"
                     /GO_function="GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          <1..78
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
ORIGIN      
        1 shkvdgnpys hlpgdvretl qsrmdatrrm faqkvsaytg lsvqavldte aavysgqeai
       61 dagladelvn stdaitvmrd aldarksrls ggrmtketqs ttvsatasqa dvt
//
LOCUS       WP_235162411              98 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Escherichia coli].
ACCESSION   WP_235162411
VERSION     WP_235162411.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 98)
  AUTHORS   Vertes,A.A., Inui,M., Kobayashi,M., Kurusu,Y. and Yukawa,H.
  TITLE     Isolation and characterization of IS31831, a transposable element
            from Corynebacterium glutamicum
  JOURNAL   Mol Microbiol 11 (4), 739-746 (1994)
   PUBMED   8196545
REFERENCE   2  (residues 1 to 98)
  AUTHORS   van der Zee,A., Agterberg,C., van Agterveld,M., Peeters,M. and
            Mooi,F.R.
  TITLE     Characterization of IS1001, an insertion sequence element of
            Bordetella parapertussis
  JOURNAL   J Bacteriol 175 (1), 141-147 (1993)
   PUBMED   8093238
REFERENCE   3  (residues 1 to 98)
  AUTHORS   Johansen,E. and Kibenich,A.
  TITLE     Isolation and characterization of IS1165, an insertion sequence of
            Leuconostoc mesenteroides subsp. cremoris and other lactic acid
            bacteria
  JOURNAL   Plasmid 27 (3), 200-206 (1992)
   PUBMED   1325060
REFERENCE   4  (residues 1 to 98)
  AUTHORS   Cirillo,J.D., Barletta,R.G., Bloom,B.R. and Jacobs,W.R. Jr.
  TITLE     A novel transposon trap for mycobacteria: isolation and
            characterization of IS1096
  JOURNAL   J Bacteriol 173 (24), 7772-7780 (1991)
   PUBMED   1660454
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013753.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01610.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..98
                     /product="transposase"
     Region          <1..94
                     /region_name="transpos_ISL3"
                     /note="ISL3 family transposase; NF033550"
                     /db_xref="CDD:468079"
ORIGIN      
        1 elkiaqqlal efyrilktqn ksqlsswfnr vhesgsaefr rvaagmeada aaiceaissr
       61 wsngvveghv nrlkmlkrqm ygragfellr qrvmspla
//
LOCUS       WP_235162437             245 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: transglycosylase SLT domain-containing protein
            [Sediminibacillus].
ACCESSION   WP_235162437
VERSION     WP_235162437.1
KEYWORDS    RefSeq.
SOURCE      Sediminibacillus
  ORGANISM  Sediminibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 245)
  AUTHORS   Koraimann,G.
  TITLE     Lytic transglycosylases in macromolecular transport systems of
            Gram-negative bacteria
  JOURNAL   Cell Mol Life Sci 60 (11), 2371-2388 (2003)
   PUBMED   14625683
REFERENCE   2  (residues 1 to 245)
  AUTHORS   Mushegian,A.R., Fullner,K.J., Koonin,E.V. and Nester,E.W.
  TITLE     A family of lysozyme-like virulence factors in bacterial pathogens
            of plants and animals
  JOURNAL   Proc Natl Acad Sci U S A 93 (14), 7321-7326 (1996)
   PUBMED   8692991
REFERENCE   3  (residues 1 to 245)
  AUTHORS   Thunnissen,A.M., Rozeboom,H.J., Kalk,K.H. and Dijkstra,B.W.
  TITLE     Structure of the 70-kDa soluble lytic transglycosylase complexed
            with bulgecin A. Implications for the enzymatic mechanism
  JOURNAL   Biochemistry 34 (39), 12729-12737 (1995)
   PUBMED   7548026
REFERENCE   4  (residues 1 to 245)
  AUTHORS   Koonin,E.V. and Rudd,K.E.
  TITLE     A conserved domain in putative bacterial and bacteriophage
            transglycosylases
  JOURNAL   Trends Biochem Sci 19 (3), 106-107 (1994)
   PUBMED   8203016
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013618.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01464.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Sediminibacillus"
                     /db_xref="taxon:482460"
     Protein         1..245
                     /product="transglycosylase SLT domain-containing protein"
                     /calculated_mol_wt=28055
     Region          11..>66
                     /region_name="FtsB"
                     /note="Cell division protein FtsB [Cell cycle control,
                     cell division, chromosome partitioning]; COG2919"
                     /db_xref="CDD:442163"
     Region          <95..223
                     /region_name="MltE"
                     /note="Soluble lytic murein transglycosylase or regulatory
                     protein s (may contain LysM/invasin domain) [Cell
                     wall/membrane/envelope biogenesis]; COG0741"
                     /db_xref="CDD:440504"
ORIGIN      
        1 mnfwsnsgsk alsflfical llflfdgfae dnqeidaisq ekeeikaqiv kleqenkqlq
       61 sekeylqsqq skspdkngyl twpkieqiad tfveesegrf kkswalylvk esqkfdvdpk
      121 ivyellkvet ggtfdaklvg petkygkayg mgqfmtntap wvaemaglpy ekellydpyy
      181 smqlsivyld ylhneygnwe ealtayhrgm sgmkkfvren gdakswyave ilsnaenhkt
      241 vvtan
//
LOCUS       WP_235162446             206 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF4879 domain-containing protein [Sediminibacillus].
ACCESSION   WP_235162446
VERSION     WP_235162446.1
KEYWORDS    RefSeq.
SOURCE      Sediminibacillus
  ORGANISM  Sediminibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027544.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16219.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Sediminibacillus"
                     /db_xref="taxon:482460"
     Protein         1..206
                     /product="DUF4879 domain-containing protein"
                     /calculated_mol_wt=23123
     Region          90..205
                     /region_name="DUF4879"
                     /note="Domain of unknown function (DUF4879); pfam16219"
                     /db_xref="CDD:435226"
ORIGIN      
        1 mrkmisitlt allfiplfig tdtasaasrq gkiinppsel skkesfkqhv lenlkddypn
       61 aqfldknfre geryqkqemi lggsdftiaa pappltslev yaaissnype yeyfssnqls
      121 svqdhggeel yivtaelgyg fqrnaafngs qlseidreni dlegdsivdg wfiwwdasgn
      181 englftyent stnspwntmf drmnik
//
LOCUS       WP_235162536            1001 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235162536
VERSION     WP_235162536.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014428.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02369.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..1001
                     /product="Ig-like domain-containing protein"
     Region          <17..499
                     /region_name="Ve_IatC_Nterm"
                     /note="inverse autotransporter adhesin IatC N-terminal
                     domain; NF040978"
                     /db_xref="CDD:468908"
     Region          <312..801
                     /region_name="Ve_IatC_Nterm"
                     /note="inverse autotransporter adhesin IatC N-terminal
                     domain; NF040978"
                     /db_xref="CDD:468908"
ORIGIN      
        1 irtaqiadlv vikdgsvadg amanmlrarv tdafgnalag qtvsvfagng attaptvite
       61 pdgtveisvt sqtagtsavt asinsssqsr dvtfiadvrt akiadlvvik dgsvadgama
      121 nmlqvkvtda ngnvlagqtv smmagngatv aptvitepdg tveipvtsqt agasavtasi
      181 nssnasrnvt fvadvrtakl adlvvikdgs vadgamantl qvkvtdafgn alggqtvsvt
      241 agnsatvtpt vttqsdgtve fsvtsqtagv savtatinnh slsqnvtfvp gdasqltstv
      301 etnksnytvg etititvtlr dafdnlvtga asqlaansvl tvdgtdpset gswvesggvy
      361 tttrmatiag tdqhanlqlq twsdgvtsdr ydiqsgspaq atstiatdkn aytagetitv
      421 avtlkdahgn lveggeslls gdnvtvegav rsgewsetag vytatwsaqm agdshhatlt
      481 lpewgsskqs esysihsgap vqansairtd ksayiagepl tvtitlrdef gnpalgltse
      541 viesyidnfa vggatpdsmq wveqnngeyt ivwtawvaee nlvaslklkt wateikssly
      601 giqpgaaaqt qstivtdktk yiagdsitvt vvlkdaqgnf itdgvaqlne envqvrnads
      661 iqgnnwvyng ngqyqrqyma hfaeanlnaq lkmagwsdan ysknytinrg evsmlrsqlr
      721 irevlvvaga dipvsvllsd efgnpvndgl dlltddavyl qnvekkhwss wtfvgdgrye
      781 rtymaykege nlnsylhing wyvggqpsyt ilpfvevesl svngakfraa dgfpktgfdg
      841 akftlilthn mkntdynwts giqgiqvdsn gmvtlefiin kevtitgtpk snkgnkvtyk
      901 fslqkwfipq giiqeswsem nsycigngyi lpsstdlvgs stsgavprkv gslwgeygnl
      961 tsydgifrae hywldsgmif ypgdghlsia prssplcmkt f
//
LOCUS       WP_235162554              71 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF977 family protein, partial [Escherichia coli].
ACCESSION   WP_235162554
VERSION     WP_235162554.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017929.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06163.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..71
                     /product="DUF977 family protein"
     Region          <23..67
                     /region_name="DUF977"
                     /note="Bacterial protein of unknown function (DUF977);
                     pfam06163"
                     /db_xref="CDD:310626"
ORIGIN      
        1 rkdwqnarkk lsrakvkkta vvdpdlirsl pdgeirrydr rqniicrecr ksevmqrvla
       61 fyrgnfqevm l
//
LOCUS       WP_235162560             208 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235162560
VERSION     WP_235162560.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>208
                     /product="DUF6531 domain-containing protein"
     Region          1..>208
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
ORIGIN      
        1 lgakvlpget dlalpgplpf ilsrtyssyr tktpapvgif gpgwkapsdi rlqirddalv
       61 lndnggrsih fepllpgeav ysrseslwlv rggkatqpdg htlarlwasl ppdirlsphl
      121 ylatnsaqgp wwilgwserv pgaedvlpap lppyrvltgl adrfgrtlty rreaagdlag
      181 eitgvtdgag refrlvlttq aqraeear
//
LOCUS       WP_235162545             790 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235162545
VERSION     WP_235162545.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>790
                     /product="DUF6531 domain-containing protein"
     Region          1..>790
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
ORIGIN      
        1 mggkpaarqg dmtrkgldiv qgsagvliga ptgvacsvcp nspieeqkgn pvnpllgakv
       61 lpgetdlals gplpfilsra yssyrtrtpa pvgvfgpgwk apfdirlqvh erelilndng
      121 grsihfeplf pgeisysrse sfwlarggva eqhssqplsa lwqvlpedvr lsphvylatn
      181 slqgpwwiln wpervpeade vlpppppayr vltgvvdgfg rsltfhheaa gelageitgv
      241 tdgagrrfhl vlttqaqrae afrkqratsl sspagprsvs sssafpdtlp agteygadng
      301 irleavwlth dpaypdeqpt aplarytyta sgellavydr sgmqvrgfty dvqhagrmva
      361 hhyagrpesr yryddtgrvt eqvnpegldy rfeygqdrvt itdslnrrev lytegegglk
      421 rvvkkehadg sitrseydea grlkaqtdaa grrteyslhm asgavtavtg pdgrtvrygy
      481 nsqrqvtsvt ypdglrssre ydekgrlaae tsrsgettsy syddpaselp tgiedatgst
      541 kqmawsrygq llaftdcsgy ttryeydryg qqiavhreeg istyssynpr gqlvsqkdaq
      601 greiryeysa agdltatisp dgkrstieyd krgrpvsvte ggltrsmeyn sagritvltn
      661 engsqstfry dpvdrlteqr gfdgrtqryh ydltgkltqs edeglitlwh ydasdrithr
      721 tvngdpaeqw qydehgwltt lshtseghrv svhygyddkg rltderqtve npetgemlwe
      781 hetghayseq
//
LOCUS       WP_235162552             149 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase, partial [Escherichia coli].
ACCESSION   WP_235162552
VERSION     WP_235162552.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 149)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..149
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
     Region          <1..>95
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
ORIGIN      
        1 tvflkkgsfa srktddmqll qeteraladt sspkviflhm mgshpnpcdr lnswpnnyqe
       61 qfprkiacyl asiskldnfl gqldgilrrh srhfagifqw ltgirtenip pfnplinedn
      121 etvmvfngek ivpadglksq pvilpgkgk
//
LOCUS       WP_235162584            1386 aa            linear   BCT 02-MAR-2025
DEFINITION  carbohydrate-binding protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235162584
VERSION     WP_235162584.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015387.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03422.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1386
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..1386
                     /product="carbohydrate-binding protein"
                     /GO_function="GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /calculated_mol_wt=152072
     Region          24..145
                     /region_name="CBM6_cellulase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); appended to
                     glycoside hydrolase (GH) domains, including GH5
                     (cellulase); cd04080"
                     /db_xref="CDD:271146"
     Site            order(35,59,61,63,93..94,133)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:271146"
     Site            order(42,50..56,109..116,140)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:271146"
     Region          152..273
                     /region_name="CBM6_cellulase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); appended to
                     glycoside hydrolase (GH) domains, including GH5
                     (cellulase); cd04080"
                     /db_xref="CDD:271146"
     Site            order(170,178..184,235..242,266)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:271146"
     Site            order(187,189,191,219..220,259)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:271146"
     Region          284..405
                     /region_name="CBM6_cellulase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); appended to
                     glycoside hydrolase (GH) domains, including GH5
                     (cellulase); cd04080"
                     /db_xref="CDD:271146"
     Site            order(302,310..316,369..376,400)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:271146"
     Site            order(319,321,323,353..354,393)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:271146"
     Region          412..534
                     /region_name="CBM6_cellulase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); appended to
                     glycoside hydrolase (GH) domains, including GH5
                     (cellulase); cd04080"
                     /db_xref="CDD:271146"
     Site            order(430,438..444,496..503,527)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:271146"
     Site            order(447,449,451,480..481,520)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:271146"
     Region          <564..605
                     /region_name="BID_2"
                     /note="Bacterial Ig-like domain 2; smart00635"
                     /db_xref="CDD:214752"
     Region          838..>904
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
     Region          1307..1382
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     pfam18962"
                     /db_xref="CDD:436869"
ORIGIN      
        1 mkkillsyfl fasfliqaqs ykalpgrvea edyaamnsvg teatsdadgg qnvgwiqdgs
       61 wmdysvtvtv agyytfrfrv angyspeaal slksangdkl gqrvlpqtgg mqnyhtvkfv
      121 vflpqgnqtl rvyaekggfn lnwfeaaasr nvsgrieaed fdavsdvrte ttsdtdgnln
      181 vgyiddgdfl dyninlaggt ytanfrians ygsgiieikn aagtllgqln vpqtggwqnw
      241 atistqltlp sgsqvihlat pqgafnfnwf elvpqaaaas gtalpakiea esfdasnnvg
      301 tettaddggg envgwiqeds wmeyqvntde sgiytmsyrv sngyspeasf alkksdgtel
      361 grttvpqtgg mqvyktvnml vslpagnetl rvqalktgwn fnwfeakasr plagkmeaet
      421 fdlssdvrle sttdtdggtt vgyiddgdwl dynvkiaaag aytigfrvsn sygngnievk
      481 ngagtvlgsi nvpqtggwnn yntirttvnl pagsqilriy anrgafnlnw feisagsvqe
      541 qstitfneig dkglnigtfd lvassnnnes pitftssnta vatvsnatgs wkatlvgagq
      601 ttitasqtgs ehflaaenvs rnltvtgqsn ptnptagaki aldpkrwyqv tnattgldkl
      661 fdgdtqtevl tgwgkvvnyy dayyplldge qitlegvkff dyvgstvdrp mvlsvindqw
      721 qripvatftg tvyngwvgpy pdrasnnqfn ldapvsniry lvltlpdvlp teiefygsht
      781 paapsngptr aknirlkdmm gvngyewnfq dgahieslve pkvtaaksfs gfrhymdwek
      841 leadegvfsf nptrsgswny dliyqrlkqe nievlaclkt lppwmlqsyp enerdsenvp
      901 vrygkdfkdp lsyieqakva fqyvarygsn lnvdpsllsv stiprwtndp pnevkigmdl
      961 ikyiecdner dkwwkgrkgy qtareyaanm safydghknt mgtavgvkna dpnmkvviag
     1021 mvtgpdylrg mvdwckefrg yradgsvnlc wdvvnfhlyt ddasssqggn strgaapevt
     1081 nanvildnfv kasrevsqdm pvwiteagyd lhqssplkai pignksaqqt qadwilrtsl
     1141 fsarhgiekv ffyqmyddnp aydwmfgtsg minddfsrrp vtdyfiqtkn lfgdyvyket
     1201 ihadpvvdry elngkslfil avpdevgrtt eytlnlgesg iakvytptag sdymavqekg
     1261 ivdgkvtvtv tetpifvias napnartaas papelipelp lhedvnvfpn patdfvnvel
     1321 anessanvev kvfdaktgrl ykndvvnksa nklshklnlt hmpigayiie vkqgnqstfr
     1381 kvakvh
//
LOCUS       WP_235162665             707 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxy terminal-processing peptidase [Dyadobacter chenhuakuii].
ACCESSION   WP_235162665
VERSION     WP_235162665.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023246.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11818.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..707
                     /product="carboxy terminal-processing peptidase"
                     /EC_number="3.4.21.102"
                     /calculated_mol_wt=79659
     Region          5..698
                     /region_name="PRK11186"
                     /note="carboxy terminal-processing peptidase"
                     /db_xref="CDD:236873"
ORIGIN      
        1 mkkylitlip vvllgwqkgp vqekaaiipa aevsmdedik pipaqfkaee lttrilssyh
       61 yrktrlsdsl sqaifdkyid gidhgklyyl asdladfdky knsfddylqk reldvpfamy
      121 nvfrkryker sdyiqgllke ekpfdftade smntdrekaa wakstdelnd twrkylksea
      181 ldlklsgkad tavistlkdr yknrdralgr irteqvfqmf mnayaesmdp htsymaptsa
      241 drfkqemsqs legigallre ednyikivev ipggpafkgk qlkkedkiia vaqgdegkmv
      301 divgwfvdda vklikgpkst vvrlqvisad aisgtppkey rlvrekikle eqrakseivs
      361 vnnankeyki gvidiplfyr dfegaqhkek efssttrdvq klitelqtsn vdgividlrn
      421 ngggslteav sltglfinrg pvvqvkegqg evevqsdndp tiaydgpmav mvnrfsasas
      481 eifaaaiqdy krgiivgeqt ygkgtvqtli dlnqwvpket dqlgqvkltv akfyringss
      541 tqlkgvmpdl elptafkvne fgegsqpsal pwdqiassry eptnninakv vdqlkgkynq
      601 rlktdeelkt lvktlndfke arenkivslq eskrkverae aekkrlamkq lgednadgee
      661 eeedgkavea pkevkkkkdi yltetsrmla dliviskeps lagtkkk
//
LOCUS       WP_235162668             336 aa            linear   BCT 02-MAR-2025
DEFINITION  thioredoxin domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235162668
VERSION     WP_235162668.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024853.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13462.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..336
                     /product="thioredoxin domain-containing protein"
                     /calculated_mol_wt=38024
     Region          <32..108
                     /region_name="SurA_N_3"
                     /note="SurA N-terminal domain; cl21568"
                     /db_xref="CDD:473912"
     Region          191..335
                     /region_name="DsbG"
                     /note="Protein thiol-disulfide isomerase DsbC
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1651"
                     /db_xref="CDD:441257"
ORIGIN      
        1 mqttsllkml gmfciglvai cscekqaekr ivavvegeai sleevdnlik nslyeylfai
       61 ydvrrialne linsrmiske akalhvsvds vtslriaemk qkltkdqyvs dnalqhgvvd
      121 eenpfklipl htdegqrile ksyvkflnqm lnkelsakyk vkisleppet pkldlrgtit
      181 yarrnmqsln vvtivsdfdc pvcqskvpvf kqlfkkysdr vrfeyvhlsp sisksilfsa
      241 caakqgkfwe ahdllfrmgq ngsqeieslm tslnldpkac ktcmesdkva deinasmeql
      301 ralgikvtpt iiinnriyyg eiseevmgqf iekslk
//
LOCUS       WP_235162681             175 aa            linear   BCT 02-MAR-2025
DEFINITION  5' nucleotidase, NT5C type [Dyadobacter chenhuakuii].
ACCESSION   WP_235162681
VERSION     WP_235162681.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 175)
  AUTHORS   Rampazzo,C., Kost-Alimova,M., Ruzzenente,B., Dumanski,J.P. and
            Bianchi,V.
  TITLE     Mouse cytosolic and mitochondrial deoxyribonucleotidases: cDNA
            cloning of the mitochondrial enzyme, gene structures, chromosomal
            mapping and comparison with the human orthologs
  JOURNAL   Gene 294 (1-2), 109-117 (2002)
   PUBMED   12234672
REFERENCE   2  (residues 1 to 175)
  AUTHORS   Rampazzo,C., Johansson,M., Gallinaro,L., Ferraro,P., Hellman,U.,
            Karlsson,A., Reichard,P. and Bianchi,V.
  TITLE     Mammalian 5'(3')-deoxyribonucleotidase, cDNA cloning, and
            overexpression of the enzyme in Escherichia coli and mammalian
            cells
  JOURNAL   J Biol Chem 275 (8), 5409-5415 (2000)
   PUBMED   10681516
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018627.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06941.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..175
                     /product="5' nucleotidase, NT5C type"
                     /GO_function="GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009264 - deoxyribonucleotide catabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=20188
     Region          1..172
                     /region_name="YorC"
                     /note="5'(3')-deoxyribonucleotidase [Nucleotide transport
                     and metabolism]; COG4502"
                     /db_xref="CDD:443586"
ORIGIN      
        1 mrksiaidmd nvivdietnw inwyekefgv kiereellgk pedeafpdpa aalsliyktg
       61 ffrhapiieg aqeallklqe hydifivsaa mefpnslpek ydwlnehfpf iswknivfcg
      121 dkriidtdyl iddhlknldf ckgtpilfta shnvnvtkhk rvnnwneala llglh
//
LOCUS       WP_235162757             515 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5723 family protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235162757
VERSION     WP_235162757.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040164.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18990.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..515
                     /product="DUF5723 family protein"
                     /calculated_mol_wt=57748
     Region          42..465
                     /region_name="DUF5723"
                     /note="Family of unknown function (DUF5723); pfam18990"
                     /db_xref="CDD:465943"
ORIGIN      
        1 mfkyslpaia lilglaqaak aqhlpgvamg nyagtnalyh npafvadsry sfyvnvvgtq
       61 fytannhvry eapysflslv tntvsdeyrn ergvlqfprs ylgeklngnq kylnaggdar
      121 lpsvmfnlfk gkigvgistr vrymlntsgv teplarlisk ttqleelqgp ffdnqagrlh
      181 lngmgevaft lggtvydnet dflkvgftvk rliglynaha iidnssydiq pdetwenkrq
      241 firveeinmr ygitrdegfq nikpspawli ggappgsgwg fdlgavyeyr pdinkfsyte
      301 kgerkrdask nkylyrvavs ltdigrvhfk npayvlqqei httnkelryd sfqklegseg
      361 ifnainssld ggaplapnfk svlptafqas vdyhvqqrvy vsglwvqnli pqsafgmkae
      421 saisvtprye hkwyeisvpl tlmnryrspa iglagrigpl wlgtdhltgl lnignpksfn
      481 lyfgisaglf rrppesqnqc wppedswirr ifskr
//
LOCUS       WP_235162847             355 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6973 domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235162847
VERSION     WP_235162847.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046734.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22322.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..355
                     /product="DUF6973 domain-containing protein"
                     /calculated_mol_wt=40017
ORIGIN      
        1 mklnlgkaas llifgftils cndpkleqts apnasekaet iefkgervii piyfpkelfg
       61 qtqeefdayy ekaaqdanvr ssgerality eellrilvtq nakyptinse egvlekdler
      121 iyrdfpdiet hleanekrav ifdyyqtlck rdvvaevial enaknartng pspgsltkpe
      181 knhlllnpgl aqhyiqaakd vefltpsifg nndddnkana fkhatwnals iryilkgspv
      241 senqaidftq dgtskheqdd ngnqvhtqke amdlhnnmsa rvwmesetkw gfgpfrsipk
      301 ndeiintfvs ranssskhtm tdilnlhggn vqntwnnlyn nlygpyqhlv nlnsn
//
LOCUS       WP_235162881             392 aa            linear   BCT 02-MAR-2025
DEFINITION  endonuclease/exonuclease/phosphatase family protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235162881
VERSION     WP_235162881.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 392)
  AUTHORS   Dlakic,M.
  TITLE     Functionally unrelated signalling proteins contain a fold similar
            to Mg2+-dependent endonucleases
  JOURNAL   Trends Biochem Sci 25 (6), 272-273 (2000)
   PUBMED   10838565
REFERENCE   2  (residues 1 to 392)
  AUTHORS   Mol,C.D., Kuo,C.F., Thayer,M.M., Cunningham,R.P. and Tainer,J.A.
  TITLE     Structure and function of the multifunctional DNA-repair enzyme
            exonuclease III
  JOURNAL   Nature 374 (6520), 381-386 (1995)
   PUBMED   7885481
REFERENCE   3  (residues 1 to 392)
  AUTHORS   Lahm,A. and Suck,D.
  TITLE     DNase I-induced DNA conformation. 2 A structure of a DNase
            I-octamer complex
  JOURNAL   J Mol Biol 222 (3), 645-667 (1991)
   PUBMED   1748997
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015338.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03372.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..392
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=43750
ORIGIN      
        1 mkhlvitial llprmlfaqn nnpseltfat ynvsmeaeny vpkgtkdise qvlvkelasg
       61 tnpqirniar iiktvrpdvi llnefdyiad pqqgvlqfvk aylnvdsdga kaidypyyyy
      121 gtsntgqpsp fdldnngkte rfgadawgfg vypgqyamvl lskypietdq vrtfqhfkwk
      181 dmpqalqtkk pdgsdwyape awqqfplssk shwdvpvkvg aktihflash ptppsfdgae
      241 drngkrnhde irfwkdyisg eqgayiyddk etrgalapda sfvilgdqna spdegnaige
      301 giksllshpk inndatpask ggfehsssnp fakthtavwr mradyvlpsr aglkfidsgv
      361 fwpakgepla elvekresss dhrlvwvkvs ld
//
LOCUS       WP_235162928            1135 aa            linear   BCT 02-MAR-2025
DEFINITION  ThuA domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235162928
VERSION     WP_235162928.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 1135)
  AUTHORS   Ampomah,O.Y., Avetisyan,A., Hansen,E., Svenson,J., Huser,T.,
            Jensen,J.B. and Bhuvaneswari,T.V.
  TITLE     The thuEFGKAB operon of rhizobia and agrobacterium tumefaciens
            codes for transport of trehalose, maltitol, and isomers of sucrose
            and their assimilation through the formation of their 3-keto
            derivatives
  JOURNAL   J Bacteriol 195 (17), 3797-3807 (2013)
   PUBMED   23772075
REFERENCE   2  (residues 1 to 1135)
  AUTHORS   Ampomah,O.Y., Jensen,J.B. and Bhuvaneswari,T.V.
  TITLE     Lack of trehalose catabolism in Sinorhizobium species increases
            their nodulation competitiveness on certain host genotypes
  JOURNAL   New Phytol 179 (2), 495-504 (2008)
   PUBMED   19086182
REFERENCE   3  (residues 1 to 1135)
  AUTHORS   Jensen,J.B., Peters,N.K. and Bhuvaneswari,T.V.
  TITLE     Redundancy in periplasmic binding protein-dependent transport
            systems for trehalose, sucrose, and maltose in Sinorhizobium
            meliloti
  JOURNAL   J Bacteriol 184 (11), 2978-2986 (2002)
   PUBMED   12003938
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018038.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06283.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1135
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..1135
                     /product="ThuA domain-containing protein"
                     /calculated_mol_wt=125433
     Region          38..251
                     /region_name="ThuA"
                     /note="Trehalose utilization; pfam06283"
                     /db_xref="CDD:461867"
     Region          263..694
                     /region_name="YliI"
                     /note="Glucose/arabinose dehydrogenase, beta-propeller
                     fold [Carbohydrate transport and metabolism]; COG2133"
                     /db_xref="CDD:441736"
     Region          716..796
                     /region_name="PKD_4"
                     /note="PKD domain; pfam18911"
                     /db_xref="CDD:436824"
     Region          871..955
                     /region_name="CytC552"
                     /note="Cytochrome c551/c552 [Energy production and
                     conversion]; COG4654"
                     /db_xref="CDD:443692"
     Region          1011..1130
                     /region_name="CBM6_xylanase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); many are
                     appended to glycoside hydrolase (GH) family 11 and GH43
                     xylanase domains; cd04084"
                     /db_xref="CDD:271150"
     Site            order(1023,1033..1034,1088,1124)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:271150"
ORIGIN      
        1 msnflnqilp kqlrkigiva macfcvnata qtvtpekrvl vfsktagfrh asipagrtal
       61 iklgkekgfa vdttenssvf neknlqkysa vvflnttgdi lndkqqdafe ryiqagggyl
      121 gihastdtey ewpwynklag aqflshpgnp nvqegeayvv ndkhesmtdf pkkwkikdef
      181 ydfknfnpkv nvlvkideks ykdgkmgddh pmswyheydg gkafytnfgh edatfvnpvf
      241 vkhltgglny vmaskldysk srpeenrftk kvlatkldep telvvlddqr vllserkgkl
      301 klynpktgki kvvadvpvyi kqeyglmgln idpnfktnkl vylyysppst ekdtaqhlsr
      361 fkyddvkdtl llsteevllt vpvkrndcch tggsiawdak gnlylstgdd vnpfqsngyg
      421 pidgrpgreg wdgrhtssnt nslrgkvlri kprygdrran mpggtnlydi pegnlfppgd
      481 pkarpeiyvm gtrnpyrisv dqhtgylywg dvgpdasndd pkrgprgyde vnqarkagyf
      541 gyplfiadnk pyvefnfads tsgkpfdpak pinnsphntg lqelppaqpa yiyypyadsp
      601 dfgaivgkgg rnamagpvyy aadfqdsksk fpgyysgkff sydwirdyin vvtmneqgdl
      661 qnierflpnt kfshpidmqf andgslytle ygpnwfaqnd easlshityn agnrvpvala
      721 tatntvgavp lkvnfsskgs idhdgdavky ewtfgkgfpk stvanpsfty akpgeyiail
      781 kvtdsagnsn tsevtvkagn aipkvdvaik gnktfywndk pvnyevsvad kedgsladkk
      841 ipedevtlti nylegfdktq laqghvantg fetgkrliel sdckachsid kksigpayie
      901 vakryekern svktladkvi rggggvwgeq amaahpqhkp eeaeemvkyi lslakekvvd
      961 kkplkssyvt eakkkdgsyi ftasytdkgs aamgpltgsk tialrpatll anaadstsni
     1021 fkfkneksge mvigtkngsf itfddidlsg isnlsvavts vaertaggil eihldgvagp
     1081 kvgegkvdka etiniaikap adnkmhklff vfrnssagpk plfgiewikf dsaam
//
LOCUS       WP_235162948             576 aa            linear   BCT 02-MAR-2025
DEFINITION  M14 family metallopeptidase [Dyadobacter chenhuakuii].
ACCESSION   WP_235162948
VERSION     WP_235162948.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 576)
  AUTHORS   Makarova,K.S. and Grishin,N.V.
  TITLE     The Zn-peptidase superfamily: functional convergence after
            evolutionary divergence
  JOURNAL   J Mol Biol 292 (1), 11-17 (1999)
   PUBMED   10493853
REFERENCE   2  (residues 1 to 576)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10154684
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..576
                     /product="M14 family metallopeptidase"
                     /EC_number="3.4.17.-"
                     /GO_function="GO:0004181 - metallocarboxypeptidase
                     activity [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=66642
     Region          87..301
                     /region_name="M14-like"
                     /note="Peptidase M14-like domain; uncharacterized
                     subgroup; cd06241"
                     /db_xref="CDD:349460"
     Site            order(97,100,160,169..170,199..200,205,287)
                     /site_type="active"
                     /db_xref="CDD:349460"
ORIGIN      
        1 mrlffysilf sftlsaqaqy ttrfessggk qtptyeegia fykllakdfp qiqitekglt
       61 dsgyplhlvl ysksktfdik klksqqkail linnaihpge sdgvdasmml lrdiavnpgk
      121 fpeldnviia vipfynigga lnrnsttrtn qagpkeygfr gnarnydlnr dfikndtrna
      181 rsfaaifhel dpdlfadthv sngadyqyvm tldyaqkdkl ggklgyfndk vflpymykhl
      241 kesgfeatpy vnswgqtpdk gfvqfpdwpr ystgyaalfh tigvmtethm lkpydkrvaa
      301 tyayllgnik flarnrrell klrkdtkeav ktqekfavsw evnkvkntqi dfkgfepeyv
      361 tskvsgtqrl synrskpftk kipfydtysp ldevtkpvay iipqgwhnii dlmklngvev
      421 kqlendgeme vetyyiqele tpkqpfeghy whtsvttktv kqqvkfkkgd wyipvnqwtn
      481 ryivetlepk gvdsffkwnf fdtilqskeh ysayvfedla aellakdvsl rikladrrkn
      541 dpefaksaaa qldfiydnsp yrekeymryp vfrvmk
//
LOCUS       WP_235162351             307 aa            linear   BCT 02-MAR-2025
DEFINITION  conjugal transfer protein TraH, partial [Escherichia coli].
ACCESSION   WP_235162351
VERSION     WP_235162351.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Lawley,T.D., Gilmour,M.W., Gunton,J.E., Standeven,L.J. and
            Taylor,D.E.
  TITLE     Functional and mutational analysis of conjugative transfer region 1
            (Tra1) from the IncHI1 plasmid R27
  JOURNAL   J Bacteriol 184 (8), 2173-2180 (2002)
   PUBMED   11914349
REFERENCE   2  (residues 1 to 307)
  AUTHORS   Maneewannakul,S., Maneewannakul,K. and Ippen-Ihler,K.
  TITLE     Characterization, localization, and sequence of F transfer region
            products: the pilus assembly gene product TraW and a new product,
            TrbI
  JOURNAL   J Bacteriol 174 (17), 5567-5574 (1992)
   PUBMED   1355084
REFERENCE   3  (residues 1 to 307)
  AUTHORS   Ham,L.M., Firth,N. and Skurray,R.
  TITLE     Nucleotide sequence of the F plasmid transfer gene, traH:
            identification of a new gene and a promoter within the transfer
            operon
  JOURNAL   Gene 75 (1), 157-165 (1989)
   PUBMED   2656408
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017892.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06122.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>307
                     /product="conjugal transfer protein TraH"
     Region          <10..304
                     /region_name="TraH"
                     /note="Conjugative relaxosome accessory transposon
                     protein; cl05580"
                     /db_xref="CDD:446722"
ORIGIN      
        1 qikhspgnpg rftrtqvsqq kvcqdiages nifadwaasr qgctvggksd svrdkasdkd
       61 kervtknini mwnalsknrm fdgnkelkef vmtltgslvf gpngeitpls arttdrsiir
      121 ammeggtaki yhcndsdkcl kvvadtpvti srdnalksqi tkllasiqnk avsdtplddk
      181 ekgfisstti pvfkylvdpq mlgvsnsmiy qltdyigydi llqyiqeliq qaramvatgn
      241 ydeaviehin dnmndatrqi aafqsqvqvq qdallvvdrq msymrqqlsa rmlsryqnny
      301 hfggstl
//
LOCUS       WP_235162974             437 aa            linear   BCT 02-MAR-2025
DEFINITION  neutral/alkaline non-lysosomal ceramidase N-terminal
            domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235162974
VERSION     WP_235162974.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 437)
  AUTHORS   Inoue,T., Okino,N., Kakuta,Y., Hijikata,A., Okano,H., Goda,H.M.,
            Tani,M., Sueyoshi,N., Kambayashi,K., Matsumura,H., Kai,Y. and
            Ito,M.
  TITLE     Mechanistic insights into the hydrolysis and synthesis of ceramide
            by neutral ceramidase
  JOURNAL   J Biol Chem 284 (14), 9566-9577 (2009)
   PUBMED   19088069
REFERENCE   2  (residues 1 to 437)
  AUTHORS   El Bawab,S., Roddy,P., Qian,T., Bielawska,A., Lemasters,J.J. and
            Hannun,Y.A.
  TITLE     Molecular cloning and characterization of a human mitochondrial
            ceramidase
  JOURNAL   J Biol Chem 275 (28), 21508-21513 (2000)
   PUBMED   10781606
REFERENCE   3  (residues 1 to 437)
  AUTHORS   Tani,M., Okino,N., Mori,K., Tanigawa,T., Izu,H. and Ito,M.
  TITLE     Molecular cloning of the full-length cDNA encoding mouse neutral
            ceramidase. A novel but highly conserved gene family of
            neutral/alkaline ceramidases
  JOURNAL   J Biol Chem 275 (15), 11229-11234 (2000)
   PUBMED   10753931
REFERENCE   4  (residues 1 to 437)
  AUTHORS   Okino,N., Ichinose,S., Omori,A., Imayama,S., Nakamura,T. and Ito,M.
  TITLE     Molecular cloning, sequencing, and expression of the gene encoding
            alkaline ceramidase from Pseudomonas aeruginosa. Cloning of a
            ceramidase homologue from Mycobacterium tuberculosis
  JOURNAL   J Biol Chem 274 (51), 36616-36622 (1999)
   PUBMED   10593963
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016612.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04734.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..437
                     /product="neutral/alkaline non-lysosomal ceramidase
                     N-terminal domain-containing protein"
                     /calculated_mol_wt=47831
     Region          37..>255
                     /region_name="PTZ00487"
                     /note="ceramidase; Provisional"
                     /db_xref="CDD:240437"
ORIGIN      
        1 mryltmrflp vciilahivf tnaafaqnfr asvvkvditp dnsqqllgyq arkstgvhdk
       61 iyhriaamdd gktqfyiist diclispsqy dkltarlqkq lgitpmqvww aaththsape
      121 vgpaglpsvf lgdrykhefd aqytdlveqk ivdgmveakk nlapaklgtg wgssnaninr
      181 rarsiegkts lgmnpdgpvd rrigllrlek adgsllalia nyamhgtvms genllisgdg
      241 pgivseyveq ktgapllyin gaagniapiy svypspaagr lnqfkamlge kiidasktit
      301 atsnqvtlka agtiveiprk eglgwpddlk nytrttkagv nmirlpvrfl kvnddvaiws
      361 aplelfceis nevrdrspfp ytfyfgytng wlgyllaeee lqyggyeptv spyapgaaks
      421 lteavvnylq gdmrsgh
//
LOCUS       WP_235163010             335 aa            linear   BCT 02-MAR-2025
DEFINITION  T9SS type A sorting domain-containing protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235163010
VERSION     WP_235163010.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 335)
  AUTHORS   Veith,P.D., Nor Muhammad,N.A., Dashper,S.G., Likic,V.A.,
            Gorasia,D.G., Chen,D., Byrne,S.J., Catmull,D.V. and Reynolds,E.C.
  TITLE     Protein substrates of a novel secretion system are numerous in the
            Bacteroidetes phylum and have in common a cleavable C-terminal
            secretion signal, extensive post-translational modification, and
            cell-surface attachment
  JOURNAL   J Proteome Res 12 (10), 4449-4461 (2013)
   PUBMED   24007199
REFERENCE   2  (residues 1 to 335)
  AUTHORS   Glew,M.D., Veith,P.D., Peng,B., Chen,Y.Y., Gorasia,D.G., Yang,Q.,
            Slakeski,N., Chen,D., Moore,C., Crawford,S. and Reynolds,E.C.
  TITLE     PG0026 is the C-terminal signal peptidase of a novel secretion
            system of Porphyromonas gingivalis
  JOURNAL   J Biol Chem 287 (29), 24605-24617 (2012)
   PUBMED   22593568
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039201.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18962.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..335
                     /product="T9SS type A sorting domain-containing protein"
                     /GO_component="GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /calculated_mol_wt=36458
     Region          260..333
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     cl46851"
                     /db_xref="CDD:481191"
ORIGIN      
        1 mkakhtlial lgftavfaea qaqlktgans ffispgttvt vsslsltpte atnlnnneit
       61 hsdvaiagkp tgsinrvynl aspltfkgkv liayleseln gnnenvlqia hagpdhiyti
      121 ptnkstpdpi lnnvsesgdw tnistltate sgsglpvtlv dfvaaqkend vvltwstsfe
      181 ansdffeiqh stdgknwlvl gdvnsngdsk iertysyvhe rplaavhyyr lrmvdndgkf
      241 afsrirnirv annfavafhp npvadwltie mpdarqpenv kivsksgsvv yeankselqk
      301 lpdgainlkq ltagiyviqv reqdgtlhss klikn
//
LOCUS       WP_235163079             146 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235163079
VERSION     WP_235163079.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 146)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07883.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..146
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=15823
     Region          42..142
                     /region_name="COG3837"
                     /note="Uncharacterized conserved protein, cupin
                     superfamily [Function unknown]"
                     /db_xref="CDD:443048"
ORIGIN      
        1 myitkrdlgi aaftacltvt cifaaspkai ldssifdwnd meakttktga vrtvfrsqta
       61 tlgelechit tlnpgdsshp phkhpeeeii iikegtveal vngkmkqvgp gsvifqasnq
      121 mhsiknvgkt pttyhvfswh sagirk
//
LOCUS       WP_235163085             484 aa            linear   BCT 02-MAR-2025
DEFINITION  S41 family peptidase [Dyadobacter chenhuakuii].
ACCESSION   WP_235163085
VERSION     WP_235163085.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015531.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03572.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..484
                     /product="S41 family peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=52930
     Region          45..429
                     /region_name="Peptidase_S41_CPP_like"
                     /note="C-terminal processing peptidase-like; serine
                     protease family S41; cd07561"
                     /db_xref="CDD:143477"
     Region          <131..190
                     /region_name="cpPDZ_Deg_HtrA-like"
                     /note="permuted PDZ domain of Deg/high-temperature
                     requirement factor A (HtrA) family of housekeeping serine
                     proteases and related domains; cl49614"
                     /db_xref="CDD:483954"
     Site            order(343,368)
                     /site_type="active"
                     /note="Catalytic dyad [active]"
                     /db_xref="CDD:143477"
ORIGIN      
        1 mlnlkklnll falalgmlva gckdkdvepd vlasadttsv sdrkainawl yevmddayfw
       61 ykelpteasl dasaspydyf ekliyqrqtv drfsavtddi dalqnefngv skifgisysl
      121 sflddgqsni gaflnyvvkg spaaaaglkr gdiilkvngt qltqgnyasl lsgnetvklt
      181 mgalqdgkii atnttysitk aevtedpvaf stviskptag ktigylvytq fvpgneadkn
      241 kydnelrqvf adfkakgvne lvldlrlnsg gyissantla sligknitas kifykeqwnd
      301 kyiaywqkqn ganalnynfq aepnnigssl nrvfvltsng tasaselvin glkpymnvvt
      361 igentagknl fgslidddkd rwkwgvyvml gqtanandes dygtvdgitp nyivedskvp
      421 ysafgdenet lfrkalevmg vpavansria aaktvepfrk llrddlqtrk nlmikdgslk
      481 avnq
//
LOCUS       WP_235163099             564 aa            linear   BCT 02-MAR-2025
DEFINITION  RagB/SusD family nutrient uptake outer membrane protein
            [Dyadobacter chenhuakuii].
ACCESSION   WP_235163099
VERSION     WP_235163099.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 564)
  AUTHORS   Goulas,T., Garcia-Ferrer,I., Hutcherson,J.A., Potempa,B.A.,
            Potempa,J., Scott,D.A. and Gomis-Ruth,F.X.
  TITLE     Structure of RagB, a major immunodominant outer-membrane surface
            receptor antigen of Porphyromonas gingivalis
  JOURNAL   Mol Oral Microbiol 31 (6), 472-485 (2016)
   PUBMED   26441291
REFERENCE   2  (residues 1 to 564)
  AUTHORS   Bolam,D.N. and Koropatkin,N.M.
  TITLE     Glycan recognition by the Bacteroidetes Sus-like systems
  JOURNAL   Curr Opin Struct Biol 22 (5), 563-569 (2012)
   PUBMED   22819666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07980.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..564
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /calculated_mol_wt=62251
     Region          97..522
                     /region_name="SusD"
                     /note="starch binding outer membrane protein SusD;
                     cl21747"
                     /db_xref="CDD:451378"
     Region          272..564
                     /region_name="SusD_RagB"
                     /note="SusD family; pfam07980"
                     /db_xref="CDD:429768"
ORIGIN      
        1 mkkklslifa vasllfvtna ctdleeqvld etlkanlspd eaangliapv yallpnlfqh
       61 ttyfalneis tdeailpyrg gtdwgdngiy lalhqhntta tdpnvtstwn tlsqsisrsi
      121 taitglkdsk sttaalyaae argmrayynm imldmygvvf vkddpnvasv iirgdeavky
      181 iesellaiep ivqpksvvgp grlnqvavwg llarlnlnaa vyrniyaptf tfspadmdkv
      241 iqytdkiias gqaklspdyf aifgnqnhtn qelifavdqr sdlnghnrla yfsisgdqfp
      301 laafpaangt dgpaitsdfy qswvqaygav dpkrdprfyq enmsvysnta dtcvkdsdyk
      361 inrgilrgqq ygalrvngaf vrcpdgklkv gklayitrnr adlpvsfgel vdfttagsny
      421 ntgfrvakye fgsesntgrn kgdadivilr ladiymmrae aklrksndaa aaladvnivr
      481 asrtattppp alttmnldll frergfefyw emlrrsdmir fgkyegkwte ksnadvkkri
      541 fpipqgaidg asntpgylvq negy
//
LOCUS       WP_235163126             401 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Dyadobacter chenhuakuii].
ACCESSION   WP_235163126
VERSION     WP_235163126.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..401
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=45480
     Region          <138..397
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mklkghqiiv fglprfdsti estnyttarl larenkvyyv enpftvrdyf klrkgpefkv
       61 rknhlsvwsg klidtdtpnl kivippllls inflpesgff rsilkinesm irrklrtiie
      121 ahnikdyifi nsfnfhyptl vnglspaltv yhcldpmilp fnqrhgvvse dilvrksdvv
      181 icssralyle kkqfnpksyf vpnaadvths skalrpdlpv fpklleikkp iigylgaier
      241 ridyellkev ithnadksfv fvgpvakefv pdwfftapnv fflgaidyad mpavikgfdv
      301 alipfkkdev sssifplklf eylgagkpvv aidfnpdlke ftedivpfct daqgftaaie
      361 ealatdskal qsrrlaiaae ntwekrvdti adiifqnlkp a
//
LOCUS       WP_235163122             868 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235163122
VERSION     WP_235163122.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 868)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 868)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 868)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 868)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..868
                     /product="ATP-binding protein"
                     /calculated_mol_wt=97311
     Region          67..595
                     /region_name="KinA"
                     /note="Sporulation sensor histidine kinase A (Stage II
                     sporulation protein SpoIIF/SpoIIJ) [Cell cycle control,
                     cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG5805"
                     /db_xref="CDD:444507"
     Region          <347..824
                     /region_name="TMAO_torS"
                     /note="TMAO reductase sytem sensor TorS; TIGR02956"
                     /db_xref="CDD:274362"
ORIGIN      
        1 mltspatkyf rlyyagiylg lalifgsqyf tyrnvkdlsl nnerlnvtig vlnqtanfgl
       61 vtkdfqsnmr gflitenkdl ladnynkkvq lveisdtlfn lvksnpvqtq rvqellkisg
      121 divaytqnii tiyrtvsads afseikkgeg irlnsllnnq irqieqhehy nlnkrrqlvs
      181 ttqknseffi fatsgvgfll tlfaifflnr dkrkqhllqk elnekerlln qyleaipdgv
      241 mvvnqqkeiv llnqsgmeil giksrkietl eeevqqlvlr dptnyhvqft aetlpvargl
      301 ageklignki dlikantifh lesnvqpvvg idgeitsait vfrditeran yeatlekari
      361 laeksvrvkd iflsnvshei rtplnaitgf tnllvseltd pksleflgyi qyanknllel
      421 indildfski eagqvhlekg sasirdliks isaimrqrag ekgisyeail adnvpefiet
      481 dklrltqill nvcgnaikft etggvklrvt pvsdlvngvq tirfqvedtg igiekdklas
      541 vfnrfvqate sttrifggtg lglsivkslv elfdgkltlq sevgkgsvft ieiplriaeh
      601 aapeaeienv ddisktvssl hilaaednll nqkllsaife rmkipltivn ngleaiqsle
      661 kggfdivlmd iqmpvmdgyt aikeirqsis ktipiitmta hamigekeec lsigansyis
      721 kpfkeselly tiahlgnken nkktapahdq pltnntmtns ilnleylaei tggdrelrde
      781 lismfendsk iqlsaireas ktrdleqmrq aihkfrsslf svgllttanq ykdyeaklkq
      841 giwdeednrk llqleadstq glaelkml
//
LOCUS       WP_235163142             426 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-propeller fold lactonase family protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235163142
VERSION     WP_235163142.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 426)
  AUTHORS   Kajander,T., Merckel,M.C., Thompson,A., Deacon,A.M., Mazur,P.,
            Kozarich,J.W. and Goldman,A.
  TITLE     The structure of Neurospora crassa 3-carboxy-cis,cis-muconate
            lactonizing enzyme, a beta propeller cycloisomerase
  JOURNAL   Structure 10 (4), 483-492 (2002)
   PUBMED   11937053
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021778.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10282.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..426
                     /product="beta-propeller fold lactonase family protein"
                     /calculated_mol_wt=44043
     Region          <201..373
                     /region_name="Pgl"
                     /note="6-phosphogluconolactonase, cycloisomerase 2 family
                     [Carbohydrate transport and metabolism]; COG2706"
                     /db_xref="CDD:442025"
ORIGIN      
        1 mkkvalfagl aalgavpaia qspinfnarg lvvvsdadma asalvdgkll rdntakdllt
       61 tikfpvergs kglgsaivsn svlassktla vpangtlayv ldsrlrpedg vseykdafte
      121 fpageklfvv ditnlaapka kfgfsvgrkp naidvnknel ilttndvgke lvfieagpdg
      181 kparflnlpa aidtankiid itwhpsgdfi aftldnsnev glykvireag klknvemvgk
      241 pvkvgaepsf gkfsadgrhy fvldtkaasp gkgtgageih vvnfsmdgai ehkvaaqvpa
      301 gtntgsfavs pdgsmlvtvn agksgapwte agsgagaslt lykvaaptga ltkvadypfe
      361 giypqsvafd kdgsnvavsv feylaygtgn ggvefwtvak gdspslkkqg avisvgkgah
      421 tlrvip
//
LOCUS       WP_235163145             167 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235163145
VERSION     WP_235163145.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..167
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=18726
     Region          17..136
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mqtlndevkn lyggnvrvrv sgiyivrdri llvnhslygk eqsfwsppgg gilfgetaea
       61 alkreireet glnaeigdll fvnehvrppl haielffeik avqgkmdkga dpeisaanqi
      121 ieevkflrld eiksfpsdas hsifsrvrsl eellrldkfl pqpetli
//
LOCUS       WP_235163188             416 aa            linear   BCT 02-MAR-2025
DEFINITION  styrene monooxygenase/indole monooxygenase family protein
            [Dyadobacter chenhuakuii].
ACCESSION   WP_235163188
VERSION     WP_235163188.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 416)
  AUTHORS   Ukaegbu,U.E., Kantz,A., Beaton,M., Gassner,G.T. and Rosenzweig,A.C.
  TITLE     Structure and ligand binding properties of the epoxidase component
            of styrene monooxygenase
  JOURNAL   Biochemistry 49 (8), 1678-1688 (2010)
   PUBMED   20055497
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037663.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17885.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..416
                     /product="styrene monooxygenase/indole monooxygenase
                     family protein"
                     /calculated_mol_wt=45646
     Region          1..>62
                     /region_name="UbiH"
                     /note="2-polyprenyl-6-methoxyphenol hydroxylase and
                     related FAD-dependent oxidoreductases [Coenzyme transport
                     and metabolism, Energy production and conversion];
                     COG0654"
                     /db_xref="CDD:440419"
     Region          146..255
                     /region_name="Smoa_sbd"
                     /note="Styrene monooxygenase A putative substrate binding
                     domain; pfam17885"
                     /db_xref="CDD:436116"
ORIGIN      
        1 mrkiaimgag qsglhlairl lksgydvtii sersageifn gpptgatylf ndtlqlekel
       61 gldlwsdtay hstgfninfg mpdgnlalsi nsktskpgvs idqrlkfyqw iklfernggk
      121 fivsdttpsd llacteqfdl vvvssgkgpl aklfqrdeak strdkparkl lqlhinnfeh
      181 pgktkftsit ldavmgagei itapfyqkdd iqcsfmlves vpggpmdvfd dvksgseqle
      241 kakkmirevl pwryeafana eiirddaflk gsfapvvrkp vvqlnstaav lgigdtviln
      301 dpivgqggnn atkmanayak aiiargdkpf dvawmnqtfd dfweyskhvn rfcdiflspp
      361 sphafdilaa asqnseiasd fingfnhpps lfpwlddade arkyisskta slesva
//
LOCUS       WP_235163218             138 aa            linear   BCT 02-MAR-2025
DEFINITION  DKNYY domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235163218
VERSION     WP_235163218.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025028.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13644.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..138
                     /product="DKNYY domain-containing protein"
                     /calculated_mol_wt=15443
     Region          <49..124
                     /region_name="DKNYY"
                     /note="DKNYY family; pfam13644"
                     /db_xref="CDD:404523"
ORIGIN      
        1 mryllgilvv iclvwicskc igcsykkgvf kpgaltpagy hvrdhrvyyy gglmndsike
       61 lvdvdaatfe ivrldtdvpg yvsssyyard hkqvyyrgyt vpgadpgsfk atgqysgrdk
      121 nhvydqtrvl pddpenen
//
LOCUS       WP_235163226             523 aa            linear   BCT 02-MAR-2025
DEFINITION  NFACT RNA binding domain-containing protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235163226
VERSION     WP_235163226.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 523)
  AUTHORS   Burroughs,A.M. and Aravind,L.
  TITLE     A highly conserved family of domains related to the DNA-glycosylase
            fold helps predict multiple novel pathways for RNA modifications
  JOURNAL   RNA Biol 11 (4), 360-372 (2014)
   PUBMED   24646681
REFERENCE   2  (residues 1 to 523)
  AUTHORS   Courtney,H.S., Li,Y., Dale,J.B. and Hasty,D.L.
  TITLE     Cloning, sequencing, and expression of a
            fibronectin/fibrinogen-binding protein from group A streptococci
  JOURNAL   Infect Immun 62 (9), 3937-3946 (1994)
   PUBMED   8063411
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017482.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05670.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..523
                     /product="NFACT RNA binding domain-containing protein"
                     /calculated_mol_wt=59354
     Region          98..519
                     /region_name="RqcH"
                     /note="Ribosome quality control (RQC) protein RqcH,
                     Rqc2/NEMF/Tae2 family, contains fibronectin-(FbpA) and
                     RNA- (NFACT) binding domains [Translation, ribosomal
                     structure and biogenesis, Posttranslational modification,
                     protein turnover, chaperones]; COG1293"
                     /db_xref="CDD:440904"
ORIGIN      
        1 mhqnyyflkq lapalhqqla gktfieafsq ekdeiilvfd ssvsdenlva pffikatlrs
       61 nfaclsfpds fdrarrnsvn lftdfqnqkv dlvqvylner aiqisfqdgk klvfklfgnr
      121 snlialneag aatqlfnnkl padksitses lnrdidqtye afiqnnerfe tlfptfgklv
      181 nayltekisg indaaekwni iqqtltklna ppyyltkiel vptlsllpag divseyndpi
      241 ealngfylay irlsgiekek adiirmlkkr lsqtdnylen tfkklvelee atkndeigni
      301 imanlhaipe rtekielfdf yrdqpitikl kkdltaqkna egyyrkakne kielgrlnds
      361 laareterqn larhltaiea ieslrelrgy ikthgldqtk avatatdlfk kvefmgytil
      421 igrnaknndv ltkqfaskdd lwlhakdvtg shvvvknqpg rnfpalvier aaelaafysk
      481 rkndslcpvi ytpkkfvrkp kglpegavvi dkesvvmvea kge
//
LOCUS       WP_235163234             384 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2062 domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235163234
VERSION     WP_235163234.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021363.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09835.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..384
                     /product="DUF2062 domain-containing protein"
                     /calculated_mol_wt=43037
     Region          10..187
                     /region_name="DPM_DPG-synthase_like"
                     /note="DPM_DPG-synthase_like is a member of the
                     Glycosyltransferase 2 superfamily; cd04179"
                     /db_xref="CDD:133022"
     Site            order(13,15,95)
                     /site_type="active"
                     /note="Ligand binding site [active]"
                     /db_xref="CDD:133022"
     Site            order(42,94..95)
                     /site_type="active"
                     /note="Putative Catalytic site [active]"
                     /db_xref="CDD:133022"
     Site            93..95
                     /site_type="active"
                     /note="DXD motif [active]"
                     /db_xref="CDD:133022"
     Region          <267..384
                     /region_name="COG3216"
                     /note="Uncharacterized conserved protein, DUF2062 family
                     [Function unknown]"
                     /db_xref="CDD:442449"
ORIGIN      
        1 mtlqdlncci ivptynnint lgrvidsllp ysqnrdiivi ndgstdgtaa llaqygdqlt
       61 ildnginrgk gyalragfae alrqhydnai sidsdgqhla sdiplfleaa kqnpgavimg
      121 srdmeqegvp gkssfgnkfs nfwfkfetgi slpdtqtgfr lyplreigki rlftmkfete
      181 ievlvklawr nvpivpvkih viydkdervt hfrpfkdftr isilntflvi ltllyylpkr
      241 lirqinkkgv wkiirdeavk sdesnlskak sigfgffmgi vpvwgfqlli giplsiyfkm
      301 nkvlfltaan isippfipfi ifgsykfggl fyqngvqlts fenltlssih vnfvqyfigg
      361 tllavaagla gfaitylllt ifrk
//
LOCUS       WP_235163245              87 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Serratia fonticola].
ACCESSION   WP_235163245
VERSION     WP_235163245.1
KEYWORDS    RefSeq.
SOURCE      Serratia fonticola
  ORGANISM  Serratia fonticola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 87)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Serratia fonticola"
                     /db_xref="taxon:47917"
     Protein         1..87
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=10475
     Region          <5..70
                     /region_name="EAL"
                     /note="EAL domain. This domain is found in diverse
                     bacterial signaling proteins. It is called EAL after its
                     conserved residues and is also known as domain of unknown
                     function 2 (DUF2). The EAL domain has been shown to
                     stimulate degradation of a second...; cl29561"
                     /db_xref="CDD:453023"
ORIGIN      
        1 mhnsrfrfvk ldrqllwdfm kkpggdglmr allrffhlnh yrviiegvet reqkkwldem
       61 pyyalqgklw qessikdlnq llaaeyf
//
LOCUS       WP_235163266             411 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Serratia fonticola].
ACCESSION   WP_235163266
VERSION     WP_235163266.1
KEYWORDS    RefSeq.
SOURCE      Serratia fonticola
  ORGANISM  Serratia fonticola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Serratia fonticola"
                     /db_xref="taxon:47917"
     Protein         1..411
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45023
     Region          19..401
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(29..30,33..34,36,69,120..121,123..125,128,148,
                     151..152,155,234,237..238,241..243,246,275,279,328..329,
                     333,337,353,356..357,360..361,364)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mparlfnpva myqglpndvy fialarfvlg lgnfiipfmv llltqklgys ttmagglamg
       61 vtafyllgnl vggkmsdsfg hknmmiwgei igsiilvvsg fftdwhsllp allfvsyfff
      121 gvalpasnal vadlstpanr navmslsyla ynlgsgvgpv lagylfwhyt awifwgngla
      181 gligvvivlf yvanpadnra tndrehtele kateasvwqv fkqrprllvf gvlcmllwfs
      241 lnqmtmttpl ylshifgqqg pvlfgqlmtf asilvvvmtp liirmtinic dikslaisaf
      301 alalgygitl lsplvtmqfi awffltigei llvtkegiyl annsprshrg risgiittir
      361 slglmptyil mgayiqsygy pdawkliigi slitglmlva lsaqqrkvge k
//
LOCUS       WP_235163344             223 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: thermostable hemolysin [Serratia].
ACCESSION   WP_235163344
VERSION     WP_235163344.1
KEYWORDS    RefSeq.
SOURCE      Serratia
  ORGANISM  Serratia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae.
REFERENCE   1  (residues 1 to 223)
  AUTHORS   Fallarino,A., Attridge,S.R., Manning,P.A. and Focareta,T.
  TITLE     Cloning and characterization of a novel haemolysin in Vibrio
            cholerae O1 that does not directly contribute to the virulence of
            the organism
  JOURNAL   Microbiology (Reading) 148 (Pt 7), 2181-2189 (2002)
   PUBMED   12101305
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023682.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12261.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Serratia"
                     /db_xref="taxon:613"
     Protein         1..223
                     /product="thermostable hemolysin"
                     /calculated_mol_wt=24646
     Region          17..183
                     /region_name="T_hemolysin"
                     /note="Thermostable hemolysin; pfam12261"
                     /db_xref="CDD:432434"
ORIGIN      
        1 mhkqqcgdil stqieiigrh deqaeksrey isrvyhdnyk atanpdpdii itckdkdsge
       61 llactgisfs algqclfser yldapldvli sqqtdhvlsr hqvveigsla sdnpnaaadf
      121 irivpiiawl mgskailcts trrlrkllaf hqipftmlae assarlspee kvawgsyydq
      181 apqtgville qcghlfnhfc grlvfsefeh lvrsalgssq vaa
//
LOCUS       WP_235163424             408 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4374 domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235163424
VERSION     WP_235163424.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14298.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..408
                     /product="DUF4374 domain-containing protein"
                     /calculated_mol_wt=44305
     Region          <252..391
                     /region_name="DUF4374"
                     /note="Domain of unknown function (DUF4374); pfam14298"
                     /db_xref="CDD:433849"
ORIGIN      
        1 mskffnlpvk tlmvalaafv lngcsddpgg napveesgky savvcvgswp ntayyiadvp
       61 sltsgqislq gngaemtgkv yaqdiiqrdg fyyhanagsg rfgkyhvekg alvvdkevpf
      121 thldwssfvw iddatlvvfg sgenaagvne aryaivkvad msvtlgklaf qafpsktmdg
      181 faigfaeyrd gkifvgysfa tsdfskwpvv esiqnfnvav vnasdmaves nifesrssvp
      241 ggpivyapvs fqdesgdiyf itdpvynydy kshsavyrik kgattldnsy yldfsaktsn
      301 gmgaamwyig ngkaivrtrv agesidaehs fsiidakngt flkkldlpad kgermvnavv
      361 leddkvyiav naadkdyiwe ydtatekltp gaefvggidy ilrlektk
//
LOCUS       WP_235163406             184 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase [Dyadobacter chenhuakuii].
ACCESSION   WP_235163406
VERSION     WP_235163406.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 184)
  AUTHORS   Shields,D.J., Niessen,S., Murphy,E.A., Mielgo,A.,
            Desgrosellier,J.S., Lau,S.K., Barnes,L.A., Lesperance,J.,
            Bouvet,M., Tarin,D., Cravatt,B.F. and Cheresh,D.A.
  TITLE     RBBP9: a tumor-associated serine hydrolase activity required for
            pancreatic neoplasia
  JOURNAL   Proc Natl Acad Sci U S A 107 (5), 2189-2194 (2010)
   PUBMED   20080647
REFERENCE   2  (residues 1 to 184)
  AUTHORS   Vorobiev,S.M., Su,M., Seetharaman,J., Huang,Y.J., Chen,C.X.,
            Maglaqui,M., Janjua,H., Proudfoot,M., Yakunin,A., Xiao,R.,
            Acton,T.B., Montelione,G.T. and Tong,L.
  TITLE     Crystal structure of human retinoblastoma binding protein 9
  JOURNAL   Proteins 74 (2), 526-529 (2009)
   PUBMED   19004028
REFERENCE   3  (residues 1 to 184)
  AUTHORS   Janda,I., Devedjiev,Y., Cooper,D., Chruszcz,M., Derewenda,U.,
            Gabrys,A., Minor,W., Joachimiak,A. and Derewenda,Z.S.
  TITLE     Harvesting the high-hanging fruit: the structure of the YdeN gene
            product from Bacillus subtilis at 1.8 angstroms resolution
  JOURNAL   Acta Crystallogr D Biol Crystallogr 60 (Pt 6), 1101-1107 (2004)
   PUBMED   15159570
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018525.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06821.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..184
                     /product="alpha/beta hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=20571
     Region          <48..165
                     /region_name="YdeN"
                     /note="Predicted esterase of the alpha/beta hydrolase fold
                     [General function prediction only]; COG3545"
                     /db_xref="CDD:442766"
ORIGIN      
        1 manriiffhg ggskedydad kklvesleds lgapysihyp flpndgspdl grrnqikeai
       61 sesedgvilv ahslgasmll aclsefnier riagifliat pfwagsedwv vpfklrqdfa
      121 etidkniplf lyhcqddeev pfiqlanyqr elpwatfrei psgghqlnnd lhvvakdlls
      181 lkla
//
LOCUS       WP_235163431             455 aa            linear   BCT 02-MAR-2025
DEFINITION  MATE family efflux transporter [Dyadobacter chenhuakuii].
ACCESSION   WP_235163431
VERSION     WP_235163431.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01554.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..455
                     /product="MATE family efflux transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=48459
     Region          11..437
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 mtatkqlgea pirtlffqny gpaiisllss iihqvingii lgqqvgkdgl aavglygpvk
       61 ivlvalslpi migggvligk sigagdfkqa qqvfqfatti villgtcvsi tapftavpla
      121 qflagaanvt laentadyaf wqlvglpfff lgmiwgnfvr annapkvsrn asilaagvnv
      181 vldlilivac gmgvkgasia tavalatgaa ylfvyikkgn thlsfstfrf tlklpqwkdy
      241 fkiglpsfas eiafssglll inqsligfga tavaafglvn ylsfllirpf taamiaalpi
      301 msfnigakqp qrvletlrfa lgftlllgiv vtaigffvsd qlimlfsgae nmayrkiasq
      361 amglyfllfl aagpnyllaa ffqstgktvi slvinllkgf lliapalmil peylglpgiw
      421 lsrslaeilt liivaaytfy ykdryfavna ivpnt
//
LOCUS       WP_235163449             605 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Dyadobacter chenhuakuii].
ACCESSION   WP_235163449
VERSION     WP_235163449.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 605)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..605
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=68575
     Region          <201..587
                     /region_name="TMAO_torS"
                     /note="TMAO reductase sytem sensor TorS; TIGR02956"
                     /db_xref="CDD:274362"
ORIGIN      
        1 maatifqnai kgdphgltnl wneafearal wgnrifcltf lvcypstsil yylngnpnyr
       61 sifliqlacs glvagiiflh frgklnsqha sfysrillii fhsfilarfq tlyyydlsin
      121 ltlqlifsiw vlhwkfsyal issvatilff slalyikgad vlvhflkegg ffyflgqsvf
      181 plvlqmrynk qyrefiyfns lqrqnkelek qnqlareamq aksdflstms heirtplngi
      241 vgvihlmlqe elrtdfqrel vgtlkfssdh lmavvndvld fnkinsnhvk larepfdlyv
      301 llknlektfi praqekglnl ifdidpalpa qltgdqvrln qvftnlihna vkftekgfvk
      361 lavkeqkrde trislhfeis dsgvgiased qssifeifiq ssseakrgnr gtgiglaitr
      421 ellrlfgsei kleseeglgs nfsfdiefdy snqqlvvekp arvtvaipda rilvvddnav
      481 nllfatnllk kiglqydkaq ngceaverfn nqhydlvlmd lkmpvmngfe atqliraqgs
      541 ttpivaltas aftderdkal angfsgylak pyvpgdlydi lftflktedd sslpkpqaqv
      601 laqdh
//
LOCUS       WP_235163477             525 aa            linear   BCT 02-MAR-2025
DEFINITION  RagB/SusD family nutrient uptake outer membrane protein
            [Dyadobacter chenhuakuii].
ACCESSION   WP_235163477
VERSION     WP_235163477.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 525)
  AUTHORS   Goulas,T., Garcia-Ferrer,I., Hutcherson,J.A., Potempa,B.A.,
            Potempa,J., Scott,D.A. and Gomis-Ruth,F.X.
  TITLE     Structure of RagB, a major immunodominant outer-membrane surface
            receptor antigen of Porphyromonas gingivalis
  JOURNAL   Mol Oral Microbiol 31 (6), 472-485 (2016)
   PUBMED   26441291
REFERENCE   2  (residues 1 to 525)
  AUTHORS   Bolam,D.N. and Koropatkin,N.M.
  TITLE     Glycan recognition by the Bacteroidetes Sus-like systems
  JOURNAL   Curr Opin Struct Biol 22 (5), 563-569 (2012)
   PUBMED   22819666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07980.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..525
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /calculated_mol_wt=59017
     Region          1..519
                     /region_name="NanU"
                     /note="SusD family outer membrane lipoprotein NanU;
                     NF033072"
                     /db_xref="CDD:333750"
ORIGIN      
        1 mkkiriyicw allsvlgssc qdalelvpqd yfgdsnfwqn esqvsnfmvg lhkqfrdnqf
       61 qflrlgemrg gnystvdrqa tslnelpvie qrleetssgv nnwagfygpi lqlnlfiqkv
      121 eaitflsetr ksyllaqaya mrayyyfhll rtyggvplvl eadvlngttd avilrkaraa
      181 eadvlaavka dvnksislfg vqaavtdksq wspnaalmlk gevflwsakv ygatadlaea
      241 kkalnavtga allpnfanvf aynqknnnei ifairfrvge aemsgvaayt ystfnfnglh
      301 ykdstvsagv gnflvdplvl aapnsqqviq ryaytfelfq sydvadsrrn atfydyykvn
      361 tdvkpnvtti kntalvkflg tidankryfs ddwpvyread rllmlaeitn aeggdptqfi
      421 qpvrdrafap akdpkpfkna gkdanelaif eertkefvhe gkrwydlrrm kyaaeplifk
      481 stnhpygvld kttqayrilw pieaaiwtnd plvaqtpgyt tarpn
//
LOCUS       WP_235163489             782 aa            linear   BCT 02-MAR-2025
DEFINITION  protein kinase domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235163489
VERSION     WP_235163489.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 782)
  AUTHORS   Hunter,T. and Plowman,G.D.
  TITLE     The protein kinases of budding yeast: six score and more
  JOURNAL   Trends Biochem Sci 22 (1), 18-22 (1997)
   PUBMED   9020587
REFERENCE   2  (residues 1 to 782)
  AUTHORS   Hanks,S.K. and Hunter,T.
  TITLE     Protein kinases 6. The eukaryotic protein kinase superfamily:
            kinase (catalytic) domain structure and classification
  JOURNAL   FASEB J 9 (8), 576-596 (1995)
   PUBMED   7768349
REFERENCE   3  (residues 1 to 782)
  AUTHORS   Hanks,S.K. and Quinn,A.M.
  TITLE     Protein kinase catalytic domain sequence database: identification
            of conserved features of primary structure and classification of
            family members
  JOURNAL   Methods Enzymol 200, 38-62 (1991)
   PUBMED   1956325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00069.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..782
                     /product="protein kinase domain-containing protein"
                     /GO_function="GO:0004672 - protein kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006468 - protein phosphorylation
                     [Evidence IEA]"
                     /calculated_mol_wt=87054
     Region          125..>393
                     /region_name="SPS1"
                     /note="Serine/threonine protein kinase [Signal
                     transduction mechanisms]; COG0515"
                     /db_xref="CDD:440281"
     Region          436..779
                     /region_name="LanC_like"
                     /note="Cyclases involved in the biosynthesis of
                     lantibiotics, and similar proteins; cl04955"
                     /db_xref="CDD:471159"
ORIGIN      
        1 masnqlyilp edvqvlpvea lpeqalakfe yeaddfivty kqarntskii dassasllqe
       61 frkpkslpeg vltyalmnnl daqkilegsy tflaklrneg flvsyddtfg agnqflnagd
      121 rfkdyeivsk ldgvadteiy kikrngqyya lkllktskkt pqllanfyne idilnaldga
      181 inpalaehge hgtdhylime wvdgetclqa aekyhnlhde snalalldic crilqaythl
      241 hsqgiihsdv hpaniivaas gelkiidfgl srkvandqip argglgfffe peyaqavlda
      301 kpappstfag eqyalgally qiftgkqyln fsydkktlft qivtetpvpf ssldiiindn
      361 iektifkals krkedryeri edfylammkv qesfpdgfae dkkmsvqvfr dsilkdygft
      421 gnlvktglql apkssvnfga agiaymllrk alvnsgaetl aladvwsdra agythdpeng
      481 fyskdmdltp sivglssiyh tpsgvdlvqa lisqaagdyg syynavrnfl vhasqpcenl
      541 dltlgksaal igsslilenm psydrftknd llafgkntme eiwsaidaya aigeknpiny
      601 rgiahgwagi fyatlkwckt sgqhlpvrff erveqlvslg iaedghlrwe isntepvswt
      661 gwchgsagyt flwtalfhft shenyldlat ktanhflnaa qpgmngslcc gksgecyall
      721 svynatkndf ylteakriak qmlphiysgq mrnhslykgn igaavlfeel erpefarmpl
      781 fe
//
LOCUS       WP_235163501             102 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6916 family protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235163501
VERSION     WP_235163501.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047043.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21880.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..102
                     /product="DUF6916 family protein"
                     /calculated_mol_wt=11180
ORIGIN      
        1 metydlsklt aqdfkdhlgq mlniefange avaanvekit eletyspler gafsvvlqtp
       61 gdqnprqqgi ykllhpqsgp levflvpiar dkggvkyeav fs
//
LOCUS       WP_235163510             144 aa            linear   BCT 02-MAR-2025
DEFINITION  antitoxin Xre-like helix-turn-helix domain-containing protein
            [Dyadobacter chenhuakuii].
ACCESSION   WP_235163510
VERSION     WP_235163510.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 144)
  AUTHORS   Freire,D.M., Gutierrez,C., Garza-Garcia,A., Grabowska,A.D.,
            Sala,A.J., Ariyachaokun,K., Panikova,T., Beckham,K.S.H., Colom,A.,
            Pogenberg,V., Cianci,M., Tuukkanen,A., Boudehen,Y.M., Peixoto,A.,
            Botella,L., Svergun,D.I., Schnappinger,D., Schneider,T.R.,
            Genevaux,P., de Carvalho,L.P.S., Wilmanns,M., Parret,A.H.A. and
            Neyrolles,O.
  TITLE     An NAD+ Phosphorylase Toxin Triggers Mycobacterium tuberculosis
            Cell Death
  JOURNAL   Mol Cell 73 (6), 1282-1291 (2019)
   PUBMED   30792174
REFERENCE   2  (residues 1 to 144)
  AUTHORS   Skjerning,R.B., Senissar,M., Winther,K.S., Gerdes,K. and
            Brodersen,D.E.
  TITLE     The RES domain toxins of RES-Xre toxin-antitoxin modules induce
            cell stasis by degrading NAD+
  JOURNAL   Mol Microbiol 111 (1), 221-236 (2019)
   PUBMED   30315706
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042861.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20432.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..144
                     /product="antitoxin Xre-like helix-turn-helix
                     domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=16178
     Region          23..141
                     /region_name="COG5642"
                     /note="Uncharacterized conserved protein, DUF2384 family
                     [Function unknown]"
                     /db_xref="CDD:444366"
ORIGIN      
        1 mkvsgnqpyh slkakftyld lgsnfaivis arkglqpkvf ydfaeaikmp eknlaalinl
       61 ssrtisnyke sqkkldplyg ehllklialf ekgeqifgnv defnywlqkp fwnsdekpad
      121 wlgtgggvdf laeeldklaq gypv
//
LOCUS       WP_235163517            1009 aa            linear   BCT 02-MAR-2025
DEFINITION  PA14 domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235163517
VERSION     WP_235163517.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 1009)
  AUTHORS   Rigden,D.J., Mello,L.V. and Galperin,M.Y.
  TITLE     The PA14 domain, a conserved all-beta domain in bacterial toxins,
            enzymes, adhesins and signaling molecules
  JOURNAL   Trends Biochem Sci 29 (7), 335-339 (2004)
   PUBMED   15236739
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07691.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..1009
                     /product="PA14 domain-containing protein"
                     /calculated_mol_wt=110362
     Region          267..352
                     /region_name="CytC552"
                     /note="Cytochrome c551/c552 [Energy production and
                     conversion]; COG4654"
                     /db_xref="CDD:443692"
     Region          409..526
                     /region_name="PA14"
                     /note="domain in bacterial beta-glucosidases other
                     glycosidases, glycosyltransferases, proteases, amidases,
                     yeast adhesins, and bacterial toxins; smart00758"
                     /db_xref="CDD:214807"
     Region          577..864
                     /region_name="YliI"
                     /note="Glucose/arabinose dehydrogenase, beta-propeller
                     fold [Carbohydrate transport and metabolism]; COG2133"
                     /db_xref="CDD:441736"
ORIGIN      
        1 mkfqkpsvgp rlaglsaail lavlgsayrg pattftpkpa tiagfsdvkr preawvlrsv
       61 ldarprilsi alhdnlwlay ntktaslyka wagkinlggp vytsshgpqp vsqgttymee
      121 pdenpwrlti dgkevtpeis ykghailnnq vtlkydldyq gkkisveekp effeagngka
      181 gfervftvan vpagselfln vhlnslssdt dykadgkflg vigqetvagk sffyingkli
      241 lnnngkttls vsltkkpaqp qtaqqeskae mvaglfaksd cntchnqevk tvgpaykaia
      301 eryenndnnk nalvtkvikg gagnwgqiam sphpdlkked aetmvsyile ldsdkeraqa
      361 asklmprpay pivlksivpa kvatatekpg iavnvyrfss gigavpeind emlpvksgsi
      421 nalhldeqdf gglkdnfaif asgyinikkt tnivfrlvcd dggklfiddk mvidngvnhp
      481 lqptdgeiil kpgkhpfkve yyqgafgkgl slqwrpygtk efvvvppsvf tykgadikrt
      541 gqtpvdvkke dipgdrsplv dvhpsftlaq arpdnfqprv ggmdfladgr mvvstwdslg
      601 svyivdgrka tapndikvkr iayglaeplg lkvvddeiyi mqkqeltklv dlnndelide
      661 yqticngwkv sanfhefafg lvykdgyfyg tlatainpgg astkpqipdr gkvvkiskkd
      721 gsftfaasgl rtpngiglgv dneifiadnq gdwlpankii hlqegawygs rsvdfegtan
      781 ktetppvvwl tqdeignsps qparlnvgpy qnqmihgdvt hggikrvfae kvngayqgav
      841 frftqgleag vnrlvwspdg slyiggvgst gnwghagklg yglqkltfnn kvafemlavr
      901 aksdgveief teplkegvge taadyqirqw wfkptgdygg pkldeedlav ksvkvspdrk
      961 katlqltgmk skhmvyihln rktiisqsgn nlwsteawyn mneipknln
//
LOCUS       WP_235163562             276 aa            linear   BCT 02-MAR-2025
DEFINITION  carcinine hydrolase/isopenicillin-N N-acyltransferase family
            protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235163562
VERSION     WP_235163562.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 276)
  AUTHORS   True,J.R., Yeh,S.D., Hovemann,B.T., Kemme,T., Meinertzhagen,I.A.,
            Edwards,T.N., Liou,S.R., Han,Q. and Li,J.
  TITLE     Drosophila tan encodes a novel hydrolase required in pigmentation
            and vision
  JOURNAL   PLoS Genet 1 (5), e63 (2005)
   PUBMED   16299587
REFERENCE   2  (residues 1 to 276)
  AUTHORS   Tobin,M.B., Cole,S.C., Miller,J.R., Baldwin,J.E. and
            Sutherland,J.D.
  TITLE     Amino-acid substitutions in the cleavage site of acyl-coenzyme
            A:isopenicillin N acyltransferase from Penicillium chrysogenum:
            effect on proenzyme cleavage and activity
  JOURNAL   Gene 162 (1), 29-35 (1995)
   PUBMED   7557412
REFERENCE   3  (residues 1 to 276)
  AUTHORS   Tobin,M.B., Fleming,M.D., Skatrud,P.L. and Miller,J.R.
  TITLE     Molecular characterization of the acyl-coenzyme A:isopenicillin N
            acyltransferase gene (penDE) from Penicillium chrysogenum and
            Aspergillus nidulans and activity of recombinant enzyme in
            Escherichia coli
  JOURNAL   J Bacteriol 172 (10), 5908-5914 (1990)
   PUBMED   2120195
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03417.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..276
                     /product="carcinine hydrolase/isopenicillin-N
                     N-acyltransferase family protein"
                     /calculated_mol_wt=31374
     Region          <23..232
                     /region_name="C45_proenzyme"
                     /note="C45 family autoproteolytic
                     acyltransferase/hydolase; NF040521"
                     /db_xref="CDD:468523"
ORIGIN      
        1 mynfkllrll alafflctpt factvftasd grttlvgnne dsspslktfl wfypgkkqkn
       61 gfvtwgvkek lpeggmndkg lfwdaaalmq eipikrdaak pdfegyfvnk alaecatvde
      121 virlvkrfnl vwqeraqvlv adasgdyali hanyiirksd qrrnyqavtn fslhygtanq
      181 epcqryntae mllgknlvsv plfkeilskt aqraidnati ysqiadlkng rfylyqhhdf
      241 eeelvislay elkkgkhqte ikklfkadrk isgtrs
//
LOCUS       WP_235163583             207 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4468 domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235163583
VERSION     WP_235163583.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14730.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..207
                     /product="DUF4468 domain-containing protein"
                     /calculated_mol_wt=23359
ORIGIN      
        1 mkyplfstlf ivalnlstps faqksglpyd rftgeitqtk svqtgqsrdk afsaarawir
       61 rtypnyrevi rvedaglgri vfqdqepivs esfksfsyrv qvdikdgfyn ctinnvktrn
      121 avsadytsad adfsnigmyg khiddigrei sitkskkaka klyqqrrnik svlqdyhksh
      181 ylmdlqftmi qnglreavlg pgslaak
//
LOCUS       WP_235163622             575 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase [Dyadobacter chenhuakuii].
ACCESSION   WP_235163622
VERSION     WP_235163622.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012371.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00144.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..575
                     /product="serine hydrolase"
                     /calculated_mol_wt=64580
     Region          34..354
                     /region_name="AmpC"
                     /note="CubicO group peptidase, beta-lactamase class C
                     family [Defense mechanisms]; COG1680"
                     /db_xref="CDD:441286"
     Region          390..465
                     /region_name="DUF3471"
                     /note="Domain of unknown function (DUF3471); pfam11954"
                     /db_xref="CDD:432217"
ORIGIN      
        1 mrpllylitt allsvahist ifaqsdklsp klsaradslf sewnkpgspg aavgvvhqgk
       61 liyakgfges dvetgakngp qtifhvasvs kqftaygivl laqqgkisld ddirkhipev
      121 pdfgktitir hlihhtsglr dqwnllvmag wqlddvitkq hvfnlikrqk elnfepgsaf
      181 aycntgytll aevvsrvgkk pfaewmqqev fkplgmkntl fydnqeqivk graysfhksq
      241 ekdgrfekai lsygnvgats lfttvndllf wmnnfrtsql ggpavmkqml ergritkgdt
      301 lpyafglahg tyrglayygh ngadagfrss ityfpkedyg fivlsnqaef apekkafdva
      361 giymgslfke dksvakksae spknenykfd stlfrqyags yelteapgfi lnfrkegdry
      421 mtqatgqqav emfpssdstf ylkvveasiv fhkpkegkvt kitlrqngeh pgnrvepkqd
      481 kdiskadfag qyyspeletl ytisfkddkl klvhvhhgev dlnvvnkdrl napwwfvqni
      541 emvrgkagei tglrmtngrv anlwfkklpe nfake
//
LOCUS       WP_235163631             165 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6934 family protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235163631
VERSION     WP_235163631.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046175.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22028.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..165
                     /product="DUF6934 family protein"
                     /calculated_mol_wt=19117
ORIGIN      
        1 mniesyttel vgerefkffs egkngrfemr irfdyldddl ynlafgvwde daqklddcie
       61 vrngdmnkil gtvaskaldf lennpessvf atgrtlpgkl avrnrkyqmg inmyyaelid
      121 ryhiygfkaa initgnnlrs ltewvgdwep frknanydaf linfk
//
LOCUS       WP_235163668              93 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6364 family protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235163668
VERSION     WP_235163668.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039417.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19891.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..93
                     /product="DUF6364 family protein"
                     /calculated_mol_wt=10270
     Region          8..>52
                     /region_name="DUF6364"
                     /note="Family of unknown function (DUF6364); pfam19891"
                     /db_xref="CDD:466224"
ORIGIN      
        1 mkttkepkvk ltlsvkksai dnakkyaqld gsslssived ylveysksnk aenqsdfkns
       61 layqlmgcak ggpldnmtdd eikdirmkdr ygl
//
LOCUS       WP_235163642             406 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase [Dyadobacter chenhuakuii].
ACCESSION   WP_235163642
VERSION     WP_235163642.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012371.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00144.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..406
                     /product="serine hydrolase"
                     /calculated_mol_wt=44548
     Region          57..404
                     /region_name="AmpC"
                     /note="CubicO group peptidase, beta-lactamase class C
                     family [Defense mechanisms]; COG1680"
                     /db_xref="CDD:441286"
ORIGIN      
        1 mknhlfktvs cglmlgavlf stsckdqeil senekveldg sdesaklgvp tkfdevafan
       61 rietylenkv agfgysiikd gkefyvnngg dgyarkkies nfefhganar qeivaatqyv
      121 tavavmrvle kynltlghtv hnylpkgwvp sasfkaltfe rllahrtgli dyanlndlek
      181 tvegpinttv fnekayqfsd anyellalil pyvhakelak qgdsgllntl nsqptnssvy
      241 yvattiygnf vrtyvfgaag lehadkiewr awsptgplsa ekatkgypsr sgsepgllke
      301 dnlinggatg lyisasqfak lqyavktfkv ikmesvfamk nkllgfdgkl ngskgayywk
      361 rgngkncetm vidfgsvqva vfanspesei sdpvvlakmf esslhp
//
LOCUS       WP_235163540             411 aa            linear   BCT 02-MAR-2025
DEFINITION  M14-type cytosolic carboxypeptidase [Dyadobacter chenhuakuii].
ACCESSION   WP_235163540
VERSION     WP_235163540.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 411)
  AUTHORS   Rimsa,V., Eadsforth,T.C., Joosten,R.P. and Hunter,W.N.
  TITLE     High-resolution structure of the M14-type cytosolic
            carboxypeptidase from Burkholderia cenocepacia refined exploiting
            PDB_REDO strategies
  JOURNAL   Acta Crystallogr D Biol Crystallogr 70 (Pt 2), 279-289 (2014)
   PUBMED   24531462
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037031.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18027.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..411
                     /product="M14-type cytosolic carboxypeptidase"
                     /calculated_mol_wt=46432
     Region          53..153
                     /region_name="Pepdidase_M14_N"
                     /note="Cytosolic carboxypeptidase N-terminal domain;
                     pfam18027"
                     /db_xref="CDD:407865"
     Region          162..411
                     /region_name="Peptidase_M14_like"
                     /note="M14 family of metallocarboxypeptidases and related
                     proteins; cl11393"
                     /db_xref="CDD:472171"
     Site            order(211,214,261,270..271,309..310,317,382)
                     /site_type="active"
                     /db_xref="CDD:349427"
ORIGIN      
        1 mflknafksl avfifclfki vsaaigqtpq dnkpapdvfi htgfenaspl nweadsagri
       61 iislvydher fslnrannhw hfkveapvgk evtlilqnfd niwnnihasp iskqspavis
      121 fdgktwesrp teyiegnrml irlkmtapsa yiasiepyri sdldkllari knhklvtitp
      181 igktaegrsl eiikigneka pkriflrgra hafeaggnwt leglidrllk ddadmklylk
      241 rycvyilpmt nkdgvargkt rfnangydln rkwdkaadsl iapenyylek wltkmgaagk
      301 kpdlgidvhn daggnlhisr pdgditayra nmarldsllr kytwytegst kpgfrnpgtl
      361 gegfmerfgi ealvyelnye wveglkkapl aadwlslggk lpevfyhyfe k
//
LOCUS       WP_235163691             193 aa            linear   BCT 02-MAR-2025
DEFINITION  chemotaxis protein CheB [Dyadobacter chenhuakuii].
ACCESSION   WP_235163691
VERSION     WP_235163691.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 193)
  AUTHORS   West,A.H., Martinez-Hackert,E. and Stock,A.M.
  TITLE     Crystal structure of the catalytic domain of the chemotaxis
            receptor methylesterase, CheB
  JOURNAL   J Mol Biol 250 (2), 276-290 (1995)
   PUBMED   7608974
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013502.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01339.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..193
                     /product="chemotaxis protein CheB"
                     /GO_component="GO:0005737 - cytoplasm [Evidence IEA]"
                     /GO_function="GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA]"
                     /GO_function="GO:0008984 - protein-glutamate
                     methylesterase activity [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /GO_process="GO:0006935 - chemotaxis [Evidence IEA]"
                     /calculated_mol_wt=21282
     Region          11..170
                     /region_name="CheB_like"
                     /note="methylesterase CheB domain family; cl03170"
                     /db_xref="CDD:470753"
ORIGIN      
        1 mnsakdesls lvlmggssgs fvilediikl lkgpisfavi fvlhrgryss svlpdlfktk
       61 tdvhmsephh ldpitsntiy falpdyhllv gedhrfyydh tepdffsrps idatfmsaam
      121 sgiplkaaml fsgssqdgaa glkllaekgc ptyvqspafa efprmpeeal lkyqkhklle
      181 engfyetisd lls
//
LOCUS       WP_235163695             279 aa            linear   BCT 02-MAR-2025
DEFINITION  zf-HC2 domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235163695
VERSION     WP_235163695.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024881.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13490.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..279
                     /product="zf-HC2 domain-containing protein"
                     /calculated_mol_wt=31490
     Region          7..>64
                     /region_name="RsiW"
                     /note="Transmembrane transcriptional regulator RsiW
                     (anti-sigma-W factor) [Transcription]; COG5662"
                     /db_xref="CDD:444381"
     Region          186..276
                     /region_name="HEAT_2"
                     /note="HEAT repeats; pfam13646"
                     /db_xref="CDD:433376"
ORIGIN      
        1 mkddkdmrce hakdkledwl hndldkvdrl nverhlaecv hcqeefasdk qlweslgkmk
       61 vpepseeirv nfyamldnfk ateetstpfs rqtfiqklrd fvlpqwsvqv afslllvglg
      121 wvighktskn nvsasayqeq ietlatqveq mkstmmlali dnpsaterlr avsytsdith
      181 adekvidalf stlnndanvn vrlvalealt qfatnavvre glvkslavqd spmvqvalad
      241 vmvklqekgs vkelrkllnr eglndlvknk ieqsikdls
//
LOCUS       WP_235163785             651 aa            linear   BCT 02-MAR-2025
DEFINITION  sialate O-acetylesterase [Dyadobacter chenhuakuii].
ACCESSION   WP_235163785
VERSION     WP_235163785.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 651)
  AUTHORS   Surolia,I., Pirnie,S.P., Chellappa,V., Taylor,K.N., Cariappa,A.,
            Moya,J., Liu,H., Bell,D.W., Driscoll,D.R., Diederichs,S.,
            Haider,K., Netravali,I., Le,S., Elia,R., Dow,E., Lee,A.,
            Freudenberg,J., De Jager,P.L., Chretien,Y., Varki,A.,
            MacDonald,M.E., Gillis,T., Behrens,T.W., Bloch,D., Collier,D.,
            Korzenik,J., Podolsky,D.K., Hafler,D., Murali,M., Sands,B.,
            Stone,J.H., Gregersen,P.K. and Pillai,S.
  TITLE     Functionally defective germline variants of sialic acid
            acetylesterase in autoimmunity
  JOURNAL   Nature 466 (7303), 243-247 (2010)
   PUBMED   20555325
REFERENCE   2  (residues 1 to 651)
  AUTHORS   Bitto,E., Bingman,C.A., McCoy,J.G., Allard,S.T., Wesenberg,G.E. and
            Phillips,G.N. Jr.
  TITLE     The structure at 1.6 Angstroms resolution of the protein product of
            the At4g34215 gene from Arabidopsis thaliana
  JOURNAL   Acta Crystallogr D Biol Crystallogr 61 (Pt 12), 1655-1661 (2005)
   PUBMED   16301800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015585.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03629.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..651
                     /product="sialate O-acetylesterase"
                     /calculated_mol_wt=72814
     Region          <44..88
                     /region_name="Ca_tandemer"
                     /note="Ca2+-stabilized adhesin repeat; NF033510"
                     /db_xref="CDD:411149"
     Region          <408..531
                     /region_name="SASA"
                     /note="Carbohydrate esterase, sialic acid-specific
                     acetylesterase; pfam03629"
                     /db_xref="CDD:427409"
ORIGIN      
        1 mkhiflflfl llntsvfaqv kfarlfsdhv vlqrqkpipv wgwakpgekv kvtlaqqtlq
       61 gkadasgkwm vkfnpmeagg phtlnvsaks gqaavndili gevwllsgqs niewpvsaak
      121 dfeiekqnad fpqirhfrve hnvtlqpetd ltsgewkiss setvggfsai gfffarevfq
      181 klnipigllh sswggsqveg wiskegmlgd delktyaqnl pktwqeadlm mdaklrktlf
      241 ksdsftpnaa deqkytsgna dfsiwiktad pvgqwdwkgv mgyrgkaymg kevtmpadmi
      301 gketslslae ndspnkiyin gklvgetqsi gvrkinvpan twkegknqlv iahgsmvgtp
      361 wfgpgmmgka tdifvedgtn kiplakdwfl mpsfaekhey ahlmnnvgts iynamivpli
      421 pfairgslwy qgeantmray qyrksfplli ndwrklwndd fsfywvqlss fgkdedsnkg
      481 sywaelreaq nmtlslpktg mavstdvgnp ndihptnkqd vahrlatqal kndygqnipy
      541 asplydkvqf sdgkavvtfk haenglmvkn rygylkgfei agddkvfyya kaeikgntve
      601 ishpkvpqpa svryawsdap eeanlfstdg fpassfrtdd wtgrsvngkf q
//
LOCUS       WP_235163816             254 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Dyadobacter chenhuakuii].
ACCESSION   WP_235163816
VERSION     WP_235163816.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..254
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=27613
     Region          5..251
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(12,14..15,17,36..38,96..98,144..146,159,163,
                     189..192)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(120,146,159,163)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 meqgnkialv tgasrglgkn malnlaqqgt diiviyrske qeaievvkti eamgrkavam
       61 qldtantklf dtfftdlqsv lettwnrktf dflinnagid anskftdtte edfdalmnvh
      121 fkgvyfltqk alpyiadngr iinlstgltr fatpgyaaya smkgaievlt kylakelghr
      181 gitvnivapg iihtdftera fkahegleaq insitalgrv gepqdigavv aflctegarw
      241 inaqrieasg gmnl
//
LOCUS       WP_235163841             275 aa            linear   BCT 02-MAR-2025
DEFINITION  MbnP family protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235163841
VERSION     WP_235163841.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 275)
  AUTHORS   Kenney,G.E., Dassama,L.M.K., Manesis,A.C., Ross,M.O., Chen,S.,
            Hoffman,B.M. and Rosenzweig,A.C.
  TITLE     MbnH is a diheme MauG-like protein associated with microbial copper
            homeostasis
  JOURNAL   J Biol Chem 294 (44), 16141-16151 (2019)
   PUBMED   31511324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042462.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20243.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..275
                     /product="MbnP family protein"
                     /calculated_mol_wt=29978
     Region          39..251
                     /region_name="MbnP"
                     /note="pfam20243"
                     /db_xref="CDD:466394"
ORIGIN      
        1 mksinqyfat alavcavfll fscstpvsps pepdapaggk lrlefdnvvg dknlvlgsvt
       61 yknasnedfv vtkfnyfisn vkltkadgsi fvvpqdssyf lvkedtktsq fvtlnnvpfa
      121 dytaaefmvg vdstrntapi ekrqgvldps gsmmddgmyw awnsgyifvk legtsskgnp
      181 vngkfyyhig lfggynertv nntrvvkmsf gqlkasvtes avpevhllvd vlkvfdgpst
      241 nisiaaynsi mggqpdksqq iasnyvnmfs ldhih
//
LOCUS       WP_235163928             332 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235163928
VERSION     WP_235163928.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 332)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 332)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..332
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=36538
     Region          3..323
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(7,9..10,12,31..33,73..75,113..115,150,154,176..179)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(91,115,150,154)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mkilitgatg lvgsatarkf laenhevfal arpdsdrsll advaskihwv egdildisal
       61 esavenmdmv vhtaavvsfi pkerksmykv nvegtanvvn vclkykigel chvssiaaig
      121 rpdarkaipg kdvvldenhr wedspensey akskhlaele vwrgiaegln avivnptlil
      181 gegdwsksst qifgyvfkek pfytegiany vdvkdvadii fqlmlsdisg erfllnggsi
      241 syqnlfntia damhkkrpsf kvgtglagii wrfeavrtwl lgtkplitke taksaarkis
      301 ydngkirkal nfefqpiert varvsesllg ki
//
LOCUS       WP_235163952             844 aa            linear   BCT 02-MAR-2025
DEFINITION  LysM peptidoglycan-binding domain-containing protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235163952
VERSION     WP_235163952.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 844)
  AUTHORS   Bateman,A. and Bycroft,M.
  TITLE     The structure of a LysM domain from E. coli membrane-bound lytic
            murein transglycosylase D (MltD)
  JOURNAL   J Mol Biol 299 (4), 1113-1119 (2000)
   PUBMED   10843862
REFERENCE   2  (residues 1 to 844)
  AUTHORS   Joris,B., Englebert,S., Chu,C.P., Kariyama,R., Daneo-Moore,L.,
            Shockman,G.D. and Ghuysen,J.M.
  TITLE     Modular design of the Enterococcus hirae muramidase-2 and
            Streptococcus faecalis autolysin
  JOURNAL   FEMS Microbiol Lett 70 (3), 257-264 (1992)
   PUBMED   1352512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01476.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..844
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..844
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=91910
     Region          50..429
                     /region_name="mltD"
                     /note="membrane-bound lytic murein transglycosylase D;
                     Provisional; PRK10783"
                     /db_xref="CDD:182727"
     Region          82..206
                     /region_name="MltD-like"
                     /note="Membrane-bound lytic murein transglycosylase D and
                     similar proteins; cd16894"
                     /db_xref="CDD:381615"
     Site            order(98,116..118,121,149,167..168)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:381615"
     Region          520..671
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
     Region          <621..841
                     /region_name="PRK06347"
                     /note="1,4-beta-N-acetylmuramoylhydrolase"
                     /db_xref="CDD:180536"
ORIGIN      
        1 mnnikyitva wmllliansn viaqaypeip ssisfgginv kldrsaqdii eedvknlmsn
       61 kkfweekmdr avlhfpiveg ilmdeevpid fkylavqess frpdvvsssn avgywqfkpe
      121 tarelnlrvd ndvderknis asthaaawyl kknnqqfnnw vttlysyyqg aggvkkvvpa
      181 dwayarevtl tgktdrymlr ffahkialea giekyktank lvlleadygk gktlddisas
      241 lgvssadlks fnrwltddki pndrqylvti pvpadqlasv reklslppqq tavasvyedt
      301 gypvlkkmpa nssdpngpdl yeinglagaq aragdkpktl akagrmsapk fmrfndmvae
      361 mqlipgqvyy lakkhkkast pfhtarpgdt whsvsqqygi rlvsllkynr ttsrnypiqt
      421 gqvlfltkkr pkkqpieiia ppqpspgkkd sviakkedvi aaapaantnv ipdkpsgrkk
      481 ytpvlvekke etasapaian ppvtnapvaa atpaaaniqt nptvktatnv pasvptepvs
      541 qqagdrvvii tqdnadtsfk saeerpvats sspskvvtpn dtraasetsv ymkqraaaee
      601 raareaaaep ktaapekpaa tekasfhtvq sgdtyfsias kysltlreli alnkntpgrl
      661 vvgqrlnvsk gapaetasaa pasaaparet pakatqepek itvvrtepae tfktpeeikh
      721 etrtatssgs eyhvvqggqt yysiskaygl svkelydlnd lngasplksg qrlrvrrtas
      781 eapaaaapst gsrssatqth tvaagetlfr isqtyhtnve dikrlnnmsg nsvmvgqklk
      841 ipqq
//
LOCUS       WP_235163961             125 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5618 family protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235163961
VERSION     WP_235163961.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036886.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18498.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..125
                     /product="DUF5618 family protein"
                     /calculated_mol_wt=13926
     Region          2..120
                     /region_name="DUF5618"
                     /note="Domain of unknown function (DUF5618); pfam18498"
                     /db_xref="CDD:436546"
ORIGIN      
        1 mssiqeakry idnakeilrd kagkedgyyq dskyvkmagh taytgilval ddllgkkgkg
       61 rkdvdwyqqh lsqldkkvln aflttyqvlh ldmaydgaks arlaaiglne aekiiswvet
      121 rseaa
//
LOCUS       WP_235163992              85 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2442 domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235163992
VERSION     WP_235163992.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10387.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..85
                     /product="DUF2442 domain-containing protein"
                     /calculated_mol_wt=9830
     Region          7..84
                     /region_name="DUF2442"
                     /note="Protein of unknown function (DUF2442); pfam10387"
                     /db_xref="CDD:431248"
ORIGIN      
        1 mtlhihviaa eylsgykilv kfsdgtqqvv dfedflvsnp hpqhnqfkvn erfknfkiek
       61 gtlvwgedwd lifpveqlha gyien
//
LOCUS       WP_235164062             102 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2683 family protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235164062
VERSION     WP_235164062.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022340.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10884.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..102
                     /product="DUF2683 family protein"
                     /calculated_mol_wt=11643
ORIGIN      
        1 mttlfinted qkvlqavkdl lknahvsfee qaespynpef iekikngkkd iqdgkrvkit
       61 ldeiiynsef vamiedgeqq ikegrttelk egenlwdlvt sk
//
LOCUS       WP_235164094             314 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Dyadobacter chenhuakuii].
ACCESSION   WP_235164094
VERSION     WP_235164094.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 314)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..314
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=34381
     Region          37..300
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 milrsmknyl fffcfvcqsa faqlpapdql skhvyklasd kmqgrgtgsk enqkaagyva
       61 aqfkkyklqp kgtngfyqpf takvrrvvvt dslretnnvi gfldngaant ivigahfdhl
      121 glgrqgsska ekpegqihng addnasgvag llelaryfsk ndvkepynfl fiafgaeelg
      181 llgsrhfvnn ptlplekinf mtnmdmigry dasrgvgigg ygtsdawpdi fkdvksdtkf
      241 ftdkagsggs dhgsfyakki pvlffhtggh ddyhkptddp ekidynaaag ilgihiqlie
      301 namklpkltf ttvi
//
LOCUS       WP_235164111             387 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235164111
VERSION     WP_235164111.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 387)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 387)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02771.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..387
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=42665
     Region          5..386
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(101,131,133,164,166,364..366,368,370)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mltpdfynin dlltpeqqli astvrdfsdr eikpiiedya qraefplhli kkfgelgvfg
       61 ptipaeyggg gldyisyglm cqeiergdsg mrstvsvqss lvmwpiyefg seeqkqkyls
      121 rlasgelvgc fgltepdhgs npagmktris ktengyllng akmwisnapf adiavaward
      181 ekgkvrgliv ergmagfttp eihnkwslra satgelvfdh vfipeknilp nasglkaplq
      241 cldkarygia wgvigaamdc yetavkyaae riqfdkpiga fqltqkklae mlteitkaql
      301 lawrlgtlmn dgratttqis makrnnvama lnvarecrqi lgamgisgey pimrhmmnle
      361 svityegthd ihllilgaei tgipafk
//
LOCUS       WP_235164116             492 aa            linear   BCT 02-MAR-2025
DEFINITION  SusD/RagB family nutrient-binding outer membrane lipoprotein
            [Dyadobacter chenhuakuii].
ACCESSION   WP_235164116
VERSION     WP_235164116.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 492)
  AUTHORS   Koropatkin,N., Martens,E.C., Gordon,J.I. and Smith,T.J.
  TITLE     Structure of a SusD homologue, BT1043, involved in mucin O-glycan
            utilization in a prominent human gut symbiont
  JOURNAL   Biochemistry 48 (7), 1532-1542 (2009)
   PUBMED   19191477
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024181.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12771.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..492
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /calculated_mol_wt=54018
     Region          35..459
                     /region_name="SusD-like_2"
                     /note="Starch-binding associating with outer membrane;
                     pfam12771"
                     /db_xref="CDD:463695"
ORIGIN      
        1 mrnilnhkti wmtalagilt assctkdfde mntspnspta igpqyllptg ietaidrywg
       61 hrtrferini daaelyvqhl trniysnegd dytvspalva nnwkgfynds qlnfqriitm
      121 sgegsanphs nyegvalvmr twvfslltdl ygaipytdai ngtadspvyt pkydamevvy
      181 agmlndlkma neklvvggpa vagdimyggd ilkwkkfans lrlrlanrqa akkpaeskai
      241 mteivgdakk fpiftsnadn aqlnctavlp snnewnqvmk qdgrtdwnis ktladkmnal
      301 ddsrikvyan pnkdgkyegh pnglpdaiat tylatsstig daftkmdape vimtfaelnf
      361 ilaeaaldge itgspktyfd agiaasfaqy gltppasfit klgavtrekv leqkwvalfa
      421 qgveawaewr rtgipvfpap dpravlqngg ilptrfpypn seyslnaesv kageglnggp
      481 ndmktklwwv ek
//
LOCUS       WP_235164155             302 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase [Dyadobacter chenhuakuii].
ACCESSION   WP_235164155
VERSION     WP_235164155.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 302)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..302
                     /product="PfkB family carbohydrate kinase"
                     /calculated_mol_wt=33259
     Region          4..269
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
     Site            order(31,235,238)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238177"
     Site            order(174,205,233,236..237,240)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238177"
ORIGIN      
        1 mydictighi tldkvvtaqs vkfmpggtsf yfskalrqfd vdymlvtala ekenhilsal
       61 rdeniqifsq pseftvyfen iysanqdhre qnvlhkaapf ttaqmpdiea rifhlgplls
      121 dditvdllks laakgtvsld iqgylryvkd qkvlykdwad kkealphvsi lkanefemev
      181 vtgtsdvrkg aayladlgvk eviitlgskg sliyvdndff ripaykptai vdatgcgdty
      241 magylskriq gagvqeagef gaamatlkiq ssgpfsgnaa mveevlqyge cdremiaqai
      301 yq
//
LOCUS       WP_235164167             182 aa            linear   BCT 02-MAR-2025
DEFINITION  YfbU family protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235164167
VERSION     WP_235164167.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015824.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03887.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..182
                     /product="YfbU family protein"
                     /calculated_mol_wt=21150
     Region          9..175
                     /region_name="YfbU"
                     /note="YfbU domain; cl01137"
                     /db_xref="CDD:470092"
ORIGIN      
        1 mtnnttipes iplierqlli nqckilsiic dekereinek rieilekgyt glypkvfnsl
       61 yeevpisvyd eissimkmyg rinesikmls neekelldla kiefegfded sgmhyymmsy
      121 lvdrmdehge ykgrqlkshn sscmikynkm lsvyselant adshfalsdl qrfiesvldt
      181 ne
//
LOCUS       WP_235164281              90 aa            linear   BCT 02-MAR-2025
DEFINITION  alcohol dehydrogenase catalytic domain-containing protein
            [Dyadobacter chenhuakuii].
ACCESSION   WP_235164281
VERSION     WP_235164281.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 90)
  AUTHORS   Taneja,B. and Mande,S.C.
  TITLE     Conserved structural features and sequence patterns in the GroES
            fold family
  JOURNAL   Protein Eng 12 (10), 815-818 (1999)
   PUBMED   10556240
REFERENCE   2  (residues 1 to 90)
  AUTHORS   Murzin,A.G.
  TITLE     Structural classification of proteins: new superfamilies
  JOURNAL   Curr Opin Struct Biol 6 (3), 386-394 (1996)
   PUBMED   8804825
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08240.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..90
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /calculated_mol_wt=9820
     Region          6..>61
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
     Region          <49..86
                     /region_name="PRK09422"
                     /note="ethanol-active dehydrogenase/acetaldehyde-active
                     reductase; Provisional"
                     /db_xref="CDD:181842"
ORIGIN      
        1 mlpkimkaav vrqfgkplqi eempverpgn hqilvkvvas gvchtdlhaa egdwpvkpks
       61 tarledindv ftymkageiq grvvmkiada
//
LOCUS       WP_235164285             288 aa            linear   BCT 02-MAR-2025
DEFINITION  universal stress protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235164285
VERSION     WP_235164285.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 288)
  AUTHORS   Sousa,M.C. and McKay,D.B.
  TITLE     Structure of the universal stress protein of Haemophilus influenzae
  JOURNAL   Structure 9 (12), 1135-1141 (2001)
   PUBMED   11738040
REFERENCE   2  (residues 1 to 288)
  AUTHORS   Zarembinski,T.I., Hung,L.W., Mueller-Dieckmann,H.J., Kim,K.K.,
            Yokota,H., Kim,R. and Kim,S.H.
  TITLE     Structure-based assignment of the biochemical function of a
            hypothetical protein: a test case of structural genomics
  JOURNAL   Proc Natl Acad Sci U S A 95 (26), 15189-15193 (1998)
   PUBMED   9860944
REFERENCE   3  (residues 1 to 288)
  AUTHORS   Nystrom,T. and Neidhardt,F.C.
  TITLE     Expression and role of the universal stress protein, UspA, of
            Escherichia coli during growth arrest
  JOURNAL   Mol Microbiol 11 (3), 537-544 (1994)
   PUBMED   8152377
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012791.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00582.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..288
                     /product="universal stress protein"
                     /calculated_mol_wt=31992
     Region          1..140
                     /region_name="UspA"
                     /note="Nucleotide-binding universal stress protein, UspA
                     family [Signal transduction mechanisms]; COG0589"
                     /db_xref="CDD:440354"
     Region          169..270
                     /region_name="UspA"
                     /note="Nucleotide-binding universal stress protein, UspA
                     family [Signal transduction mechanisms]; COG0589"
                     /db_xref="CDD:440354"
ORIGIN      
        1 mktilvpidf senadkalaa akqiaaktga kllimyayqp yvgdfmipes ivtapiyqql
       61 kddyrtklne rvsraqqegy ladaiwetgs vetavlkqak ensadlivvg rtghaafldk
      121 ligsaatgia lqahcpvlii ppnnevirfd qfvyatqlef dekeilldvi altkqlkskl
      181 rlvkvnsdeq ldiqpdgqyi deiehelgig rgeitilnsd hvmdrlekyc gqikadlliv
      241 snrrrgflek llnpsmtkkl tmdtqvpllv yhkesvkdgl kapmvilg
//
LOCUS       WP_235164316             243 aa            linear   BCT 02-MAR-2025
DEFINITION  outer membrane beta-barrel protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235164316
VERSION     WP_235164316.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024957.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13568.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..243
                     /product="outer membrane beta-barrel protein"
                     /calculated_mol_wt=26069
     Region          21..205
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mkkqliltav ffaffqiaar aqndmsifig gggggnlsty sytadyadty tsssakpgln
       61 ggfvfgmefg kmaivsgvnf iqkgtkaetd nyriendyvg fvkarentsf isipllfryr
      121 ilgekiglva sagpsfnvav sgnsrlelev agvgsrsqsg dinfgsgind tykrfqpgfm
      181 lgpgmlmpvg ekgklavnml fdlgfdavnk rnatarging kvmnvsailn vtythhfvfg
      241 dky
//
LOCUS       WP_235164329             327 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4466 family protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235164329
VERSION     WP_235164329.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026075.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14725.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..327
                     /product="DUF4466 family protein"
                     /calculated_mol_wt=35714
     Region          25..326
                     /region_name="DUF4466"
                     /note="Domain of unknown function (DUF4466); pfam14725"
                     /db_xref="CDD:434160"
ORIGIN      
        1 mkntclyyfl vligcltlss ckeeeyaipt lkqelqndvi krtlgpnlvg mdiefayama
       61 lpksmgklvs aeveatiagg estylesrsf ytngsgedvg ievgsksvns ggkttvtftk
      121 dtsaatlryf yripgaakgk evsfkfsaqa sngqsvsysm gpykvaemdl vldldvvdst
      181 kafisiedma vytaatagan askidlvyly rsipnitfsh glvapsakty lpsvilpaga
      241 trntkvqkvw nlrdfhlarl qygvyiddld fqqlnistap nyainmraea gvwvetedgk
      301 yrayvyvnsv nnsgrsakis ikryqmk
//
LOCUS       WP_235164367             506 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1501 domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235164367
VERSION     WP_235164367.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019040.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07394.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..506
                     /product="DUF1501 domain-containing protein"
                     /calculated_mol_wt=54795
     Region          1..440
                     /region_name="COG4102"
                     /note="Uncharacterized conserved protein, DUF1501 family
                     [Function unknown]"
                     /db_xref="CDD:443278"
     Region          456..>496
                     /region_name="G8"
                     /note="G8 domain; pfam10162"
                     /db_xref="CDD:462971"
ORIGIN      
        1 mkrrqfltta sasllpialn gfslrsvskn sgliqsilkt naiaddkvlv iiylnggndg
       61 lntvipiehy snyyslrsni aipesnvlrl qgnletglhp amtgmrkmyd egklaivhsv
      121 sypnpnqshn rsadiymtgv esnqfatsgw agrfleknyp gypqgypnsn medplalqig
      181 yvatttllgs qqstainikt pgnfyqivgs ptqqssdlpc cdpgdliayv reqqllsvgy
      241 aseikaasda gtnlaayppa aeandlaeql kivaklihgg lrtkvyyvel egfdthsgqv
      301 gttsvegtha kllkklsdav aafqndlklq gtenkviglt fsdfgrrats naskgtdhgi
      361 aapmfvfgtg ikrqiigtnp dlvngllpel pgpseinrdi kmqidfrrvy sdilndwfgn
      421 asssteqvly rnfnttslfs dlvqsissgs winpstwsng rvpaaadair inrghivevg
      481 hniiakkihv egelkflgny svktts
//
LOCUS       WP_235164405             719 aa            linear   BCT 02-MAR-2025
DEFINITION  FN3 associated domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235164405
VERSION     WP_235164405.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024683.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13287.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..719
                     /product="FN3 associated domain-containing protein"
                     /calculated_mol_wt=80204
     Region          38..181
                     /region_name="COG4244"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:443386"
     Region          205..264
                     /region_name="PSCyt1"
                     /note="Planctomycete cytochrome C; pfam07635"
                     /db_xref="CDD:429568"
     Region          <358..517
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          500..559
                     /region_name="Fn3_assoc"
                     /note="Fn3 associated; pfam13287"
                     /db_xref="CDD:463829"
ORIGIN      
        1 mrrfvsdwkg lifnaalfln gllvfllife srfavpfwmq avgrmhplvl hfplvvlily
       61 siwvvaierp dstrwnaeia dtllaigaft aavaafsgfv lsredgyesd tlqwhkwlgv
      121 aislmsvgwy glrqylmpwk llsklvagif llvlfvgghl ggnlthgedf lisplgpsae
      181 erpkvaleqa evyehlvkpv leqkcischn qekskgnlqm qtqallvkgg ksgalwdttk
      241 adlgllisrl hlplddkkhm pprgkvqlte eevvllaawv kagsrfdqkv stlsgqdpiy
      301 ayaqntlggd rteeqydfsa adadevkkln styrliksls aespalyvnf ynsanftsee
      361 iagltplknq ivsmdlskmp lkdadlkslt qftelrklil nftditgatl gelkkleklr
      421 elslsgtavk mqhvrsletf pslkkvfiws tglttnelaa lrkgqkiafe tgfrsdtvil
      481 plspptivne sqilaadglv slkhqipqtt irytldgsep dstqslvykk piqlsenkll
      541 karaykdgwy gskpvsrrff kasmkidsvr lvkpadqrya gkagatlidg vksedeqnsg
      601 kwlgynedfq gylyfkkpvq arrvtlsmlr nlngsifppt rievwggade nslkllkvit
      661 pqmpvkdipg vetilyeapf eqqqlscikv iakhlpklpa whsgkgnkaw vfvdevfvn
//
LOCUS       WP_235164459             281 aa            linear   BCT 02-MAR-2025
DEFINITION  relaxase/mobilization nuclease domain-containing protein
            [Dyadobacter chenhuakuii].
ACCESSION   WP_235164459
VERSION     WP_235164459.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 281)
  AUTHORS   Meyer,R.
  TITLE     Identification of the mob genes of plasmid pSC101 and
            characterization of a hybrid pSC101-R1162 system for conjugal
            mobilization
  JOURNAL   J Bacteriol 182 (17), 4875-4881 (2000)
   PUBMED   10940031
REFERENCE   2  (residues 1 to 281)
  AUTHORS   Bravo-Angel,A.M., Gloeckler,V., Hohn,B. and Tinland,B.
  TITLE     Bacterial conjugation protein MobA mediates integration of complex
            DNA structures into plant cells
  JOURNAL   J Bacteriol 181 (18), 5758-5765 (1999)
   PUBMED   10482518
REFERENCE   3  (residues 1 to 281)
  AUTHORS   Byrd,D.R. and Matson,S.W.
  TITLE     Nicking by transesterification: the reaction catalysed by a
            relaxase
  JOURNAL   Mol Microbiol 25 (6), 1011-1022 (1997)
   PUBMED   9350859
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015397.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03432.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..281
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /calculated_mol_wt=32203
     Region          57..256
                     /region_name="Relaxase"
                     /note="Relaxase/mobilization nuclease domain; cl21589"
                     /db_xref="CDD:451322"
ORIGIN      
        1 migkvglgnf akgilsycyy ekeltakqlk evtiddvrge liyiqhlgin tmpdgrldld
       61 ylakqmldnr dknrnlnkyv whqsfsflpg edpsieklts lvvefakefg faenqmlafk
      121 hndtkhkhih ivanrinyng kntsdhfkny artgefsrrm elelgltits dmslnqkgkq
      181 haprqdtaii nlrslvdqvl akassidefg kqmqthgfkt yigrgiaffn mqnrmkvkgs
      241 dlgkdyslqn leqrmgmems qafvplkrkk ksrrkqqgls v
//
LOCUS       WP_235164493             340 aa            linear   BCT 02-MAR-2025
DEFINITION  c-type cytochrome [Dyadobacter chenhuakuii].
ACCESSION   WP_235164493
VERSION     WP_235164493.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024834.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13442.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..340
                     /product="c-type cytochrome"
                     /GO_function="GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=36909
     Region          157..>324
                     /region_name="DHOR"
                     /note="Di-haem oxidoreductase, putative peroxidase;
                     cl21467"
                     /db_xref="CDD:473872"
ORIGIN      
        1 mkfrtyleti agigiyplis liiffvffvs livfvigidk kslqkmesmp lndgvikkal
       61 lsllffftmg gsafaqetae piraisgnel illvllailf faallvvial vntvtllrki
      121 sapakaetqd apviswwkkf agmsilpsqe hqliiqghdy dgiqeldnrm ppwlqslfla
      181 tvvigigyga yyfsgigdyq laelekevaq aeidkkayma kvgasmdent vtligeeaai
      241 gqgkaifqek ctachgadgg gsvgpnltda ywlhgagikn lfkvikygvp ekgmiswekq
      301 lsptdiqkva syvhslqgtk paspkepqge lvssnqvaen
//
LOCUS       WP_235164535             523 aa            linear   BCT 02-MAR-2025
DEFINITION  MutS-related protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235164535
VERSION     WP_235164535.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 523)
  AUTHORS   Obmolova,G., Ban,C., Hsieh,P. and Yang,W.
  TITLE     Crystal structures of mismatch repair protein MutS and its complex
            with a substrate DNA
  JOURNAL   Nature 407 (6805), 703-710 (2000)
   PUBMED   11048710
REFERENCE   2  (residues 1 to 523)
  AUTHORS   Tachiki,H., Kato,R., Masui,R., Hasegawa,K., Itakura,H., Fukuyama,K.
            and Kuramitsu,S.
  TITLE     Domain organization and functional analysis of Thermus thermophilus
            MutS protein
  JOURNAL   Nucleic Acids Res 26 (18), 4153-4159 (1998)
   PUBMED   9722634
  REMARK    Erratum:[Nucleic Acids Res 1998 Oct 15;26(20):following 4789]
REFERENCE   3  (residues 1 to 523)
  AUTHORS   Jiricny,J.
  TITLE     Colon cancer and DNA repair: have mismatches met their match?
  JOURNAL   Trends Genet 10 (5), 164-168 (1994)
   PUBMED   8036718
REFERENCE   4  (residues 1 to 523)
  AUTHORS   New,L., Liu,K. and Crouse,G.F.
  TITLE     The yeast gene MSH3 defines a new class of eukaryotic MutS
            homologues
  JOURNAL   Mol Gen Genet 239 (1-2), 97-108 (1993)
   PUBMED   8510668
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012700.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00488.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..523
                     /product="MutS-related protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0030983 - mismatched DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006298 - mismatch repair [Evidence IEA]"
                     /calculated_mol_wt=59155
     Region          314..504
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            342..349
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213250"
     Site            order(345..346,348..350,385,422..423,456)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:213250"
     Site            382..385
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213250"
     Site            390..403
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213250"
     Site            418..423
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213250"
     Site            426..429
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213250"
     Site            452..458
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213250"
ORIGIN      
        1 mssktssdkd hiaqikkgff nfgqiekyfv ndkrdgvfqv isdrtfqdld ledvfkfidr
       61 tvscvgqqyl yyfmrviplg darkerlenv isifqadpal raattteisk lnktdayyit
      121 slfhgkytpr pgwywliqll savsvlavim afflpqilif livllpvnlg ihywnknnly
      181 qygssipqll iltqtarsil knpefaaqnn alqaqvsmld qlglpmsifk ieaklqgeig
      241 mfvdyvfelf kalflvepvl lftilkilds krqhiedvfr fvaetdials tlalresvpy
      301 acqpdfhlel khlqirdvyh plifdgvand ltlqtksall tgsnmsgktt firtvginal
      361 lgqtintcfa hafamtamki hssirisddl lgdksyyfee vltiknllee srsgysnlfl
      421 ldelfkgtns veriaigksv lsyltqgsnl alasthdrel snfladtfdl yhftevihqd
      481 avifdyklkp gklvttnair ilelndypst vvqealtlaa gnr
//
LOCUS       WP_235164579             132 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235164579
VERSION     WP_235164579.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 132)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 132)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..132
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=14405
     Region          3..>131
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mtktifitga stgigratak lfaakgwkvi atmrkpenet elhalnnvtv lpldvtntrq
       61 iheitqqala lgdidvvfnn agyglfgale amtdeqlvqq metnffgvvr vtqaflpyfr
      121 erkaglfitt gl
//
LOCUS       WP_235164618            1684 aa            linear   BCT 02-MAR-2025
DEFINITION  T9SS type A sorting domain-containing protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235164618
VERSION     WP_235164618.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 1684)
  AUTHORS   Veith,P.D., Nor Muhammad,N.A., Dashper,S.G., Likic,V.A.,
            Gorasia,D.G., Chen,D., Byrne,S.J., Catmull,D.V. and Reynolds,E.C.
  TITLE     Protein substrates of a novel secretion system are numerous in the
            Bacteroidetes phylum and have in common a cleavable C-terminal
            secretion signal, extensive post-translational modification, and
            cell-surface attachment
  JOURNAL   J Proteome Res 12 (10), 4449-4461 (2013)
   PUBMED   24007199
REFERENCE   2  (residues 1 to 1684)
  AUTHORS   Glew,M.D., Veith,P.D., Peng,B., Chen,Y.Y., Gorasia,D.G., Yang,Q.,
            Slakeski,N., Chen,D., Moore,C., Crawford,S. and Reynolds,E.C.
  TITLE     PG0026 is the C-terminal signal peptidase of a novel secretion
            system of Porphyromonas gingivalis
  JOURNAL   J Biol Chem 287 (29), 24605-24617 (2012)
   PUBMED   22593568
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039201.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18962.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1684
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..1684
                     /product="T9SS type A sorting domain-containing protein"
                     /GO_component="GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /calculated_mol_wt=174190
     Region          275..>1412
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          1606..1675
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     cl46851"
                     /db_xref="CDD:481191"
ORIGIN      
        1 mkllqklifa sgllglmaat sddalrknql avasqvycgi kpgtneplkw thdeflgnvg
       61 gkpvytiihq nriyirwdgn pdqsrkneaf entaillhmd nnkfpnnteg nrvvnacins
      121 idpstmgnny lgtqqgnmip cnnkpitdgl mlgtykggdg vrtfqyaiik dgllrvnfhr
      181 etngysrdai smglirqtle gengsfmnpn mgfslnynev lscfwnelpk npdsvvnpep
      241 ncpggptlgt itnisqtalr fsysgngipn idwriksgnn vlrsgktgnl sstnvdisfg
      301 smaagnytle ieggdcassv ssqaftinqa ncpsgpsisn vrnvsptgit vdfngsgvpn
      361 ltwrvkqsgn vvrngktgnl ssnsasisfn slgagtysie ieggdclssv stsnftvvpg
      421 scpggpslgt isnisasglr fqfdgngvpn itwriksgad vvrngktpgl tsslvdisfa
      481 tlgggtytle ieggdcistv ssktfsigst ncasgpsisg itnvsatglt fnfngvgvst
      541 vtwrvkqngn tvasgktgtl ssnsaaitfg slgaggytle ieggnctsav sssnftvstp
      601 ncasgpaisg lrnvsasglt vdfnavgvsn itwrvkqsgn virngktgnl gsnsaalsfa
      661 tlgagtysle ieggdcvssv sssnftinpg tcpggptlgt isnisasglr fqfdgngvpn
      721 itwriksgad vvrngktpgl tsslvdisfa tlaggnytle ieggdcistv ssrtfsvgst
      781 ncasgpsisg itgvsatglt fnfngvgvst vtwrvklngn tvangktgtl ssnsaaitfa
      841 slaagnysle ieggnctsav sasnftiaip ncasgpaisg lrnvsasglt vdfnavgvsn
      901 itwrvkqsgn iirngktgnl tsnsaalsfa tlgagtysle ieggncissv sssnftinag
      961 tcpggptlgt isnisasglr fqfdgngvpn itwriksgad vvrngktpgl tsslvdisfa
     1021 tlgggtytle ieggdcvstv ssktfsigst ncasgpsisg itnvsatslt fnfngvgvst
     1081 vtwrvklsgn vvasgktgtl ssnsaaitfa slaagnysle ieggnctstv stsnftvatp
     1141 ncasgpsisg lrnvsasglt vdfngvgvpn itwrvkqsgn virngktgnl tsnsaaltfa
     1201 tlgagtysle iqggdcvstv stsnftinag tcpggptlgt isnisasglr fqfdgngvpn
     1261 itwriksgad vvrngktpgl tsslvdisfa algggtytle ieggdcistv ssktfsigst
     1321 ncasgptisg ianvsatglt vnfngvgvss vtwrikqgga ivangttgnl ssnsaaitfa
     1381 alnagsysle iqggncvstv ssstfnvttv dnrlpceygp ilksvynqte tglifnfhgn
     1441 nvssidwkim qgntvmrsar vnltsdrpqi sfaalergdy tlqieggsck stvqtmafki
     1501 davlpiyiar faaapaeegv elswnvtdeq ngkgfeviry dnqvkvpnvi gelplsdkrv
     1561 geykfvdksp vygnnyyqlk mvdrdgkfls srivtvryea itgafvspnp vrdvvnvefi
     1621 sksagkgrve tynisgikln saeqdvvegk ntlplnvtgl neghyflkvy ygnqemnmrf
     1681 fkvr
//
LOCUS       WP_235164054             301 aa            linear   BCT 02-MAR-2025
DEFINITION  BT_3987 domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235164054
VERSION     WP_235164054.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 301)
  AUTHORS   Li,M., Li,S., Guo,X., Guo,C., Wang,Y., Du,Z., Zhang,Z., Xie,C. and
            Ding,K.
  TITLE     Discrete genetic loci in human gut Bacteroides thetaiotaomicron
            confer pectin metabolism
  JOURNAL   Carbohydr Polym 272, 118534 (2021)
   PUBMED   34420703
REFERENCE   2  (residues 1 to 301)
  AUTHORS   Trastoy,B., Du,J.J., Li,C., Garcia-Alija,M., Klontz,E.H.,
            Roberts,B.R., Donahue,T.C., Wang,L.X., Sundberg,E.J. and
            Guerin,M.E.
  TITLE     GH18 endo-beta-N-acetylglucosaminidases use distinct mechanisms to
            process hybrid-type N-linked glycans
  JOURNAL   J Biol Chem 297 (2), 101011 (2021)
   PUBMED   34324829
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020111.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08522.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..301
                     /product="BT_3987 domain-containing protein"
                     /calculated_mol_wt=32108
     Region          44..158
                     /region_name="DUF1735"
                     /note="Domain of unknown function (DUF1735); pfam08522"
                     /db_xref="CDD:430052"
     Region          165..298
                     /region_name="DUF4361"
                     /note="Domain of unknown function (DUF4361); pfam14274"
                     /db_xref="CDD:433828"
ORIGIN      
        1 mnysikiagl flfgmavtsc lkdeisldpd tstnvvefkn pssfvspsgs tyslysqsfd
       61 ladeadypvt vsysgadvap editvtlgvd taavtqynte qeeafdaitp dlytipasvv
      121 ipkgqrraev viklkpskfd faksyvlpiq iksvssgivs gnfgtillav kakniydaty
      181 aatgyvyhpt apravakdkp mvtvspttvs velgdlggsg ynanltidpk tnkvtitpaa
      241 gaagapytqf dkelpapyks awagaskann tydpatktfy lrygymggng wrvteeilvr
      301 k
//
LOCUS       WP_235164640             340 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA reductase [Dyadobacter chenhuakuii].
ACCESSION   WP_235164640
VERSION     WP_235164640.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 340)
  AUTHORS   Lee,C.Y. and Meighen,E.A.
  TITLE     Cysteine-286 as the site of acylation of the Lux-specific fatty
            acyl-CoA reductase
  JOURNAL   Biochim Biophys Acta 1338 (2), 215-222 (1997)
   PUBMED   9128139
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017686.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05893.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..340
                     /product="acyl-CoA reductase"
                     /GO_function="GO:0003995 - acyl-CoA dehydrogenase activity
                     [Evidence IEA]"
                     /GO_process="GO:0008218 - bioluminescence [Evidence IEA]"
                     /calculated_mol_wt=38378
     Region          19..>153
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
ORIGIN      
        1 misraqrina finlgkfitn pqnesvieew iaransrnnw ftpenvarsl naiahqflnp
       61 dklnvwtaqy pepvsfqkig vvmagnipav gfhdalsvii sghilmakps sddqmlihal
      121 ldklmeiepg lkehiqfver lndadayiat gsdntaryfh yyfakkpnii rrnrtsvail
      181 tgkesteela algrdvlqyf glgcrnvskl fvpvgydftk fyesiqdldk tylhhhkyfn
      241 nyeynksifl vnrvphydng flllteskal vsaisvlhye tyesvtdiea plndqaekiq
      301 cvvtnadial pglipfgktq epglydyada vdtmaflaef
//
LOCUS       WP_235164466             278 aa            linear   BCT 02-MAR-2025
DEFINITION  caspase family protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235164466
VERSION     WP_235164466.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 278)
  AUTHORS   Wilson,K.P., Black,J.A., Thomson,J.A., Kim,E.E., Griffith,J.P.,
            Navia,M.A., Murcko,M.A., Chambers,S.P., Aldape,R.A., Raybuck,S.A.
            et al.
  TITLE     Structure and mechanism of interleukin-1 beta converting enzyme
  JOURNAL   Nature 370 (6487), 270-275 (1994)
   PUBMED   8035875
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012862.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00656.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..278
                     /product="caspase family protein"
                     /GO_function="GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=30805
     Region          1..>228
                     /region_name="Raptor_N"
                     /note="Raptor N-terminal CASPase like domain; cl46306"
                     /db_xref="CDD:480646"
ORIGIN      
        1 masayslsig lnkvdpahyn gwdgalnape ndardihmlt kslgysgdll igneatrenv
       61 isaingaatn lkegdmfvlf ysghggqlpd ldgdefdred etwclydael mddhlrllwh
      121 kfaanvrilv lsdschsgtv iklrpdggrn sftdylprig vktipvelal styivnkgfy
      181 deyirqvdmq kadlkdhein atvrlisgcq dnqssydgtf nssftgalki vwnggkfsgn
      241 ytrfhseiqq slpsyqspnh lvegrsnaay dhqvpfti
//
LOCUS       WP_235164687            1361 aa            linear   BCT 02-MAR-2025
DEFINITION  FG-GAP-like repeat-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235164687
VERSION     WP_235164687.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13517.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1361
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..1361
                     /product="FG-GAP-like repeat-containing protein"
                     /calculated_mol_wt=143342
     Region          274..>317
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          338..388
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          377..>847
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          397..448
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          459..507
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          521..569
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          707..755
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          829..882
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          893..940
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          955..997
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          1013..1059
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          1024..1101
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          1289..1360
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mkqhykkgly lilfmlwaaa yilkmselvt gthipdlptq ikakdipdqs nvvhdstvsn
       61 iqqslakrey nisfddekks lqspnrkqgl rayykpgelm vnnrvdsagh nfsfklineg
      121 iyadgqkilg pqtdatlhha dnklqirhhg fteefinnee gvrqnfivsf apkatielqv
      181 rlsakglkvk dlqnnqlqfy aenkrgevvs sliykdikcw dakgdtlpat lsyknglvml
      241 svavedasyp vtidpivvng npanansvle snqagaqagy avssagdvng dgysdvivga
      301 pffdkgesne gaafiyhgsa sgiassaait legnqneaqf gisaasagdi nkdgfsdiii
      361 gapfyskgen kegvamvfyg salgiksngt imevnqpdak fgraveglgd vngdgysdvi
      421 vgapmydkgq adegagfiyh gsaggiglaa amileadqag aqygyslaga gdvngdgynd
      481 viigayaydn gqtnegaafv yhgsaigiak naaiffesnq inaqfgwava tagdvngdgy
      541 sdiiigsyly dygqanegaa fiyqgsaqgi ktgairlesn qaearlgisv acagdvngdg
      601 ysdimigiwq ydkgesnega vvvhhgsang itttaastle snqadaglgw aaksagdvng
      661 dgysdiiiga ngydkgqade gvafvwlgma egvaatpill emnqghalfg wsvsnagdvn
      721 gdgfsdiiig adgfdngqsd egaafifhgs ttgininatt qlesnrthal lgksvssagd
      781 ingdgygdvi vgaigysnge ayegaafify gsttgidkns avilesnqad almgrsatsa
      841 gdvngdgygd viigaeafdn slfnegaafv yhgskngiis qyhirmesdq etaymgysva
      901 sagdvngdgy sdvligipwy tngqiregva ylhygsangl tdlnkvlles dqdesqfgws
      961 vsgagdvngd gfediiigsp tevskdrvhi yygsvtgvsp anhsslkiad etaffgacvr
     1021 sagdingdgy tdiiigaphy tgsilyqgaa fifsgsvngi pdgslpsnil ttpqlqtasf
     1081 tgeavsgagd ingdgysdii lgsykysngs adegialtfy gnsnnnlqnn lrlynsdltt
     1141 pinqsqkakn nfgislyaks flgrskgklv wetkakgqgf skgannvitn stmssgswig
     1201 yaslgltgve mksliakqgt stkvrvrvky dpalaltgql ygpwrylpay llgnsaapvp
     1261 esvvddmset vrrkvgetma ekegelvyvy pnpasdrlml ksddfdkiks iqmltvtgrs
     1321 vyrssapfte idvrnfaagn yillithadg svstrkvvie k
//
LOCUS       WP_235164715             401 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5009 domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235164715
VERSION     WP_235164715.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027716.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16401.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..401
                     /product="DUF5009 domain-containing protein"
                     /calculated_mol_wt=44342
     Region          10..388
                     /region_name="COG4299"
                     /note="Predicted acyltransferase, DUF1624 domain [General
                     function prediction only]"
                     /db_xref="CDD:443440"
ORIGIN      
        1 mkpllpaslr ldsidifrav tmlimifvnd fwtlkgvpew mqhskgpeda mglsdvvfpv
       61 flfivglsip faianrkskg dsngtilyhi aertfalllm gifivnyena vssgmivsky
      121 vweilmvvaf fliwnvypdr pekkplytgl kvlgylllvg laviykggda anpswmgthw
      181 ygilgligwa ylvcaviyfl agdnltlnva gwlflilfnl adfegmlsfl dpvrdyvwiv
      241 gsgampaftm agvvasviyr lyskkngvna tylailvvlg ivcllygfgt rpfwgiskir
      301 atpawvgics giafivfaml fwlvdlqkvk twatiikpag tatltcylvp yiwyavltlv
      361 gfslpeflrt giigliksfc fallviivtg iinrggirlk i
//
LOCUS       WP_235164719             948 aa            linear   BCT 02-MAR-2025
DEFINITION  HEAT repeat domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235164719
VERSION     WP_235164719.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025030.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13646.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..948
                     /product="HEAT repeat domain-containing protein"
                     /calculated_mol_wt=108415
     Region          7..428
                     /region_name="TlcC"
                     /note="ATP/ADP translocase [Energy production and
                     conversion]; COG3202"
                     /db_xref="CDD:442435"
     Region          451..479
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          467..601
                     /region_name="HEAT"
                     /note="HEAT repeat [General function prediction only];
                     COG1413"
                     /db_xref="CDD:441023"
     Region          486..516
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          526..555
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          566..597
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
ORIGIN      
        1 mkkikdisrm lnirkdeesl vsllmaysff mggatalfyt vvassflmsf drlmlpqvyv
       61 vggvfvyllg lgltriqkri pfnrlgenal lflivsiavf lviyhltgsk wvffflfiwn
      121 rifvlvngvt fwavvvklfn fqqskrlssl insgevfssv imylavpalv kilpidslli
      181 lavgflivca vllrkihkrh vttdhtriei kpkpaehlat davdpkyfrn ifllallpvf
      241 alfyveyiff tesrnvfpnk eslasflgff fgisaileff iktffynkli skyglklgil
      301 ilplslvfsf avsviyglgy dtaaiffaci alsrffmsav rkaiaepayq vlyqpiqarf
      361 rlnvqgrieg rakamgglaa gvllfvlvni srmdalqlai lflvvavcwt fvafvgensy
      421 kkmvrdkifn fpekskknas ytpgqaisek pfeqlinqif spkeedriea alglgatnrf
      481 lsykylipll qdpnkrvrea aiytagelkr aelwpflmeq metdryftva fdalvksgpp
      541 llkyieksfl snednryrql hllkiveqig gpeairflrr nlenpnrfvk dkvlealrnl
      601 rytcntteqt fmlneldehl ktfawllsaq hdlsdayepe sqlmlnlere rmrimrkafi
      661 vleavygsrf havtllkgdq atdardylte icdlllpeni knkvlpylds dsldemrrry
      721 aeiyplatls veerlidiin kdytrisrwt kavaikelrh fdagivtpvl vanavsrski
      781 isetsfyvlr ivnparfrsl meamtrknda fhieimkple wlsteedllv sklrrlreth
      841 alggllsgel qkvlltsayf qeesgevvdl rkqlsdgdvs ilvtygklff skigameagn
      901 irnvaeltam gvamipnvle dtefyiienf llkdlnirqn veesveih
//
LOCUS       WP_235164759             649 aa            linear   BCT 02-MAR-2025
DEFINITION  plastocyanin/azurin family copper-binding protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235164759
VERSION     WP_235164759.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012355.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00127.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..649
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /GO_function="GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /calculated_mol_wt=71099
     Region          47..351
                     /region_name="YliI"
                     /note="Glucose/arabinose dehydrogenase, beta-propeller
                     fold [Carbohydrate transport and metabolism]; COG2133"
                     /db_xref="CDD:441736"
     Region          530..648
                     /region_name="Auracyanin"
                     /note="Auracyanins A and B and similar proteins; cd04233"
                     /db_xref="CDD:259895"
ORIGIN      
        1 mvrcaivall ficavnalaq nvleneskfy kistvpvpds imlevgglaf tdddklgvat
       61 rrgeiwvidd pyqkrsrtpg yslfasglhe plwlaykkga fyttqrselt kmsdsngdgl
      121 adlfqtvysw pisgnyheys ygplilpnge mlvtlnlswv grgesltkwr gwmlkitedg
      181 kmtpfatgmr spaafglnay gdifvaenqg dwigsgrith lnagdfaghp aglkwasepg
      241 spidlerssf tdsigimydy amgkphfkvp siwfphtvmg istsaivsmd seeagpfkgq
      301 llvgdqghsk imraflekvn gqyqgacfpf regfasgilr mawgsdhslf vgmtsrgwas
      361 tgkelfglqr lifpeqfple ikamritttg feleftkpid kavagateny kmtgftysyh
      421 kkygspvins gnchvekaei sedgtkvklt vnglragyih elkianlatp kgekllhpea
      481 yytinsfpeg tshthhamah sqapasatgc gtdptksihe qpsewktgad vtinmatkpg
      541 lkfdkeilev kagskvklvf dnnddmlhnl vvitpgkgee vgqlamdmgl ngtnagyipd
      601 tksvlfhtcl iqpetsqtiy ftapkpgdyp ficsfpghsf vmkgvmkvr
//
LOCUS       WP_235164768             753 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5703 domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235164768
VERSION     WP_235164768.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039200.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18961.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..753
                     /product="DUF5703 domain-containing protein"
                     /calculated_mol_wt=86021
     Region          3..294
                     /region_name="DUF5703_N"
                     /note="Domain of unknown function (DUF5703); pfam18961"
                     /db_xref="CDD:465933"
ORIGIN      
        1 mkwtsqskns gesmpcgggd iglnvwveng dvlfylsrsg afdennifpk lgrvrvrisp
       61 npfekgaefr qelklqegyv eiagksgnqe vilkvwidvf npvvhvdvsg nkpvtvnawy
      121 eswrtedrev qareknassf kwlkdkvias kdivhthqng ilfyhqnkds tlfdlavkqq
      181 qleplkpalw nplkgmvygg wmqgenmvpd ldkgklkavs gkyvnapfqg fglrskaaar
      241 thqlnvflhi ddnshvgkwk sglaavvskv kkeeqtarkk tldwwkaywq rshiavnark
      301 pdaaspiwqv grnyqifrym lgcnaygsyp tkfngglfty dpvfidstlk fgpdyrswgg
      361 gtftaqnqrl vywpmlksgd fdmmssqfnf ylrtlgnaea rtkhywghkg asfteqienf
      421 glpnyaeygq krpkdfdpgl eynawleylw dtslefclmm ldierftgsd iskylplies
      481 ctvffdehyq ylaekrgakk vnqnghliif pgsaaemykm tynsvttisg lktvlsrlla
      541 lpeiygtpdq rkdwesrlsr vpplsfrqmq ghqtiapaqa weriqnteip qlypvfpfsm
      601 ygvglpdlev avntwkydte aiknrnytsw hqdnifcarl glteeaaalt ikklqdsgrr
      661 fpafwgpghd wvpdhnwggs gmiglqemlm qtvgdsihlf pawpqdwdvh fklhaphntt
      721 vegelkngkv hnlkvipear kkdvvmaewa ksy
//
LOCUS       WP_235164800             195 aa            linear   BCT 02-MAR-2025
DEFINITION  DsbA family protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235164800
VERSION     WP_235164800.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025119.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13743.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..195
                     /product="DsbA family protein"
                     /calculated_mol_wt=21878
     Region          16..173
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 myvtnsfsqp ikivyytypl cqiswgmqes wrrlvktygd risfqfclar endkssdvel
       61 ssysaclavk aaglqsptaa dlflnklrea ameekrdisr vdvlvevare vnkqhrglld
      121 lhrfgkdfda katrqalhad lekihrnrid sfptitmtla gkglklaghc syqrlttalh
      181 kllgasdsts qvsyg
//
LOCUS       WP_235164551              71 aa            linear   BCT 02-MAR-2025
DEFINITION  antitoxin AF2212-like protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235164551
VERSION     WP_235164551.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 71)
  AUTHORS   Makarova,K.S., Wolf,Y.I. and Koonin,E.V.
  TITLE     Comprehensive comparative-genomic analysis of type 2
            toxin-antitoxin systems and related mobile stress response systems
            in prokaryotes
  JOURNAL   Biol Direct 4, 19 (2009)
   PUBMED   19493340
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 71)
  AUTHORS   Pandey,D.P. and Gerdes,K.
  TITLE     Toxin-antitoxin loci are highly abundant in free-living but lost
            from host-associated prokaryotes
  JOURNAL   Nucleic Acids Res 33 (3), 966-976 (2005)
   PUBMED   15718296
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014059.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01954.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..71
                     /product="antitoxin AF2212-like protein"
                     /calculated_mol_wt=7964
     Region          <38..70
                     /region_name="DUF2281"
                     /note="Protein of unknown function (DUF2281); cl02355"
                     /db_xref="CDD:470547"
ORIGIN      
        1 mltviegtye ngqvildhkp kienktkvvv ifeetempae tlirrpfgis ngnitlspdf
       61 ndplddlkdy m
//
LOCUS       WP_235164806             416 aa            linear   BCT 02-MAR-2025
DEFINITION  alkaline phosphatase family protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235164806
VERSION     WP_235164806.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 416)
  AUTHORS   Jin-Hua,P., Goding,J.W., Nakamura,H. and Sano,K.
  TITLE     Molecular cloning and chromosomal localization of PD-Ibeta (PDNP3),
            a new member of the human phosphodiesterase I genes
  JOURNAL   Genomics 45 (2), 412-415 (1997)
   PUBMED   9344668
REFERENCE   2  (residues 1 to 416)
  AUTHORS   Peiffer,W.E., Desrosiers,M.G. and Menick,D.R.
  TITLE     Cloning and expression of the unique Ca2+-ATPase from
            Flavobacterium odoratum
  JOURNAL   J Biol Chem 271 (9), 5095-5100 (1996)
   PUBMED   8617788
REFERENCE   3  (residues 1 to 416)
  AUTHORS   Deissler,H., Lottspeich,F. and Rajewsky,M.F.
  TITLE     Affinity purification and cDNA cloning of rat neural
            differentiation and tumor cell surface antigen gp130RB13-6 reveals
            relationship to human and murine PC-1
  JOURNAL   J Biol Chem 270 (17), 9849-9855 (1995)
   PUBMED   7730366
REFERENCE   4  (residues 1 to 416)
  AUTHORS   Murata,J., Lee,H.Y., Clair,T., Krutzsch,H.C., Arestad,A.A.,
            Sobel,M.E., Liotta,L.A. and Stracke,M.L.
  TITLE     cDNA cloning of the human tumor motility-stimulating protein,
            autotaxin, reveals a homology with phosphodiesterases
  JOURNAL   J Biol Chem 269 (48), 30479-30484 (1994)
   PUBMED   7982964
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01663.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..416
                     /product="alkaline phosphatase family protein"
                     /calculated_mol_wt=47010
     Region          4..>252
                     /region_name="AtaC"
                     /note="c-di-AMP phosphodiesterase AtaC or nucleotide
                     pyrophosphatase, AlkP superfamily [Signal transduction
                     mechanisms]; COG1524"
                     /db_xref="CDD:441133"
     Region          <197..314
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
ORIGIN      
        1 mspkqaitii ltlflfhqta aqtknkslfv ivdgisyeql kkvatpnlda iakvggmtra
       61 yvggekktys qtptisavgy nslltgtwvn khnvwdndik apnyhywtvf rffreaypak
      121 ktaifstwld nrtkligtgl petgkmkmdy ffdgfeldti nfphdkgaqy iskidgkvvd
      181 eaaaniksea pdlswvylef tddmghrygn spqffdavkr mdaqmgqlwe avkereskhg
      241 enwqlfittd hgrgepagkd hggqsdaers twivtnakel nhyftkseqn kqipaivdim
      301 ptmarhldlk ipkeqrfeld gipltgkisi tdlavkkesd nilvswlpqe kdgevkiwla
      361 vtnkfetggs dlymlmkqlp vsegkasldi skfpkgfykv vvegkynavn rwiveq
//
LOCUS       WP_235164814             432 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4932 domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235164814
VERSION     WP_235164814.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027610.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16286.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..432
                     /product="DUF4932 domain-containing protein"
                     /calculated_mol_wt=49273
     Region          94..420
                     /region_name="DUF4932"
                     /note="Domain of unknown function (DUF4932); pfam16286"
                     /db_xref="CDD:406648"
ORIGIN      
        1 myldgqrdef nginklgrhf syafvvpqds svfklvsesd sismvlkpkk nsvfkivrea
       61 qgdtvtctfs iqklvkpasl ndaykikneg ktsieipevy eliniiialt rygetnaiyk
      121 dtdyfkkvit hfttykqeaa vrsvdsllql speffylhlk mdsyvyifsg dkiingaiyn
      181 riasgeknel dpyipvletf agksgfrafy kkqlpyytsl kkdytdnidv sgmknwltre
      241 fpaiknsavk vifsplvgwn qsassltdng fteaqahvnf pfinekdkaq pagvlkgqrm
      301 miafteinha ylnpeaekhe kaihnsfkdl skwitpgkps agynnalvcf eeymnyglvt
      361 lfysdifdqk tfaslndrie nnmtesrgfq qfktfnqell rlyrnrkpgq tvadlypdii
      421 nwasghadar dr
//
LOCUS       WP_235164914             158 aa            linear   BCT 02-MAR-2025
DEFINITION  AIDA repeat-containing protein, partial [Escherichia coli].
ACCESSION   WP_235164914
VERSION     WP_235164914.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 158)
  AUTHORS   Selkrig,J., Mosbahi,K., Webb,C.T., Belousoff,M.J., Perry,A.J.,
            Wells,T.J., Morris,F., Leyton,D.L., Totsika,M., Phan,M.D.,
            Celik,N., Kelly,M., Oates,C., Hartland,E.L., Robins-Browne,R.M.,
            Ramarathinam,S.H., Purcell,A.W., Schembri,M.A., Strugnell,R.A.,
            Henderson,I.R., Walker,D. and Lithgow,T.
  TITLE     Discovery of an archetypal protein transport system in bacterial
            outer membranes
  JOURNAL   Nat Struct Mol Biol 19 (5), 506-510,S1 (2012)
   PUBMED   22466966
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 158)
  AUTHORS   Fang,Y., Ngeleka,M., Middleton,D.M. and Simko,E.
  TITLE     Characterization and immuno-detection of AIDA-I adhesin isolated
            from porcine Escherichia coli
  JOURNAL   Vet Microbiol 109 (1-2), 65-73 (2005)
   PUBMED   15950405
REFERENCE   3  (residues 1 to 158)
  AUTHORS   Sherlock,O., Schembri,M.A., Reisner,A. and Klemm,P.
  TITLE     Novel roles for the AIDA adhesin from diarrheagenic Escherichia
            coli: cell aggregation and biofilm formation
  JOURNAL   J Bacteriol 186 (23), 8058-8065 (2004)
   PUBMED   15547278
REFERENCE   4  (residues 1 to 158)
  AUTHORS   Farthing,M.J.
  TITLE     Bugs and the gut: an unstable marriage
  JOURNAL   Best Pract Res Clin Gastroenterol 18 (2), 233-239 (2004)
   PUBMED   15123066
REFERENCE   5  (residues 1 to 158)
  AUTHORS   Benz,I. and Schmidt,M.A.
  TITLE     AIDA-I, the adhesin involved in diffuse adherence of the
            diarrhoeagenic Escherichia coli strain 2787 (O126:H27), is
            synthesized via a precursor molecule
  JOURNAL   Mol Microbiol 6 (11), 1539-1546 (1992)
   PUBMED   1625582
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027494.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16168.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>158
                     /product="AIDA repeat-containing protein"
     Region          1..>158
                     /region_name="auto_Ag43"
                     /note="Ag43/Cah family autotransporter adhesin; NF033177"
                     /db_xref="CDD:467980"
ORIGIN      
        1 gitistgley gpdneantgg qwvqdggtas nttissgglq fvgaggkatd tiinegggqs
       61 lkglalnttl nggeqwmheg aiatgtvind kgwqvvkpga vatdtvvntg aeggpdaena
      121 dtgqfvrgna vrttinkngr qivavegtan ttvvyagg
//
LOCUS       WP_235164982             132 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Dyadobacter chenhuakuii].
ACCESSION   WP_235164982
VERSION     WP_235164982.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 132)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..132
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=14464
     Region          6..122
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(106..109,111)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 mkeqktiyla dddqddrffl rqaiqaanas teiievengl elikamkqls gqqaslilmd
       61 mnmpkmngle tiaairadad lsavpvvmis tssntlliek ayqagadsfi tkpstfeefn
      121 qlgielteqf ls
//
LOCUS       WP_235164987             449 aa            linear   BCT 02-MAR-2025
DEFINITION  MutS-related protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235164987
VERSION     WP_235164987.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 449)
  AUTHORS   Obmolova,G., Ban,C., Hsieh,P. and Yang,W.
  TITLE     Crystal structures of mismatch repair protein MutS and its complex
            with a substrate DNA
  JOURNAL   Nature 407 (6805), 703-710 (2000)
   PUBMED   11048710
REFERENCE   2  (residues 1 to 449)
  AUTHORS   Tachiki,H., Kato,R., Masui,R., Hasegawa,K., Itakura,H., Fukuyama,K.
            and Kuramitsu,S.
  TITLE     Domain organization and functional analysis of Thermus thermophilus
            MutS protein
  JOURNAL   Nucleic Acids Res 26 (18), 4153-4159 (1998)
   PUBMED   9722634
  REMARK    Erratum:[Nucleic Acids Res 1998 Oct 15;26(20):following 4789]
REFERENCE   3  (residues 1 to 449)
  AUTHORS   Jiricny,J.
  TITLE     Colon cancer and DNA repair: have mismatches met their match?
  JOURNAL   Trends Genet 10 (5), 164-168 (1994)
   PUBMED   8036718
REFERENCE   4  (residues 1 to 449)
  AUTHORS   New,L., Liu,K. and Crouse,G.F.
  TITLE     The yeast gene MSH3 defines a new class of eukaryotic MutS
            homologues
  JOURNAL   Mol Gen Genet 239 (1-2), 97-108 (1993)
   PUBMED   8510668
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012700.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00488.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..449
                     /product="MutS-related protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0030983 - mismatched DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006298 - mismatch repair [Evidence IEA]"
                     /calculated_mol_wt=51432
     Region          29..254
                     /region_name="MUTSd"
                     /note="DNA-binding domain of DNA mismatch repair MUTS
                     family; smart00533"
                     /db_xref="CDD:214710"
     Region          244..442
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            274..281
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213250"
     Site            order(277..278,280..282,318,355..356,390)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:213250"
     Site            315..318
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213250"
     Site            323..336
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213250"
     Site            351..356
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213250"
     Site            359..362
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213250"
     Site            386..392
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213250"
ORIGIN      
        1 mkiieifkmh pidpqtlqel qilpkssrdp silhffdhta teggrdclre mllkpkrsld
       61 eihsfqellk afiqmpdafk vdiprtyvsa aeayyasnia ysmsqdvfqh wfdtwifswr
      121 spsefyivrs gftatfrllk aieemiselp ealpelladd ilfvkallnk kgmnsllkiq
      181 dskltrrtvf fwdyflrisn kkdfrrildi fykldalrsi altatihhlq fpifvanaeq
      241 vhfkaeqlwh plienavpns ltlhsqtpvc mltgantsgk ttflktcgia vylahagfpv
      301 paamlrltfa drlftsihls dnialgyshf fgevmrikvi aealhaqesc fviidelfrg
      361 tnqedslycs mtvidgfark kqslfmvsth lepllkhyes nvqlcfrcfr tniagddfvn
      421 tyqiengisk erlgqvilrk agvkellhg
//
LOCUS       WP_235165004             140 aa            linear   BCT 02-MAR-2025
DEFINITION  STAS domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235165004
VERSION     WP_235165004.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 140)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The STAS domain - a link between anion transporters and
            antisigma-factor antagonists
  JOURNAL   Curr Biol 10 (2), R53-R55 (2000)
   PUBMED   10662676
REFERENCE   2  (residues 1 to 140)
  AUTHORS   Kovacs,H., Comfort,D., Lord,M., Campbell,I.D. and Yudkin,M.D.
  TITLE     Solution structure of SpoIIAA, a phosphorylatable component of the
            system that regulates transcription factor sigmaF of Bacillus
            subtilis
  JOURNAL   Proc Natl Acad Sci U S A 95 (9), 5067-5071 (1998)
   PUBMED   9560229
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013868.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01740.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..140
                     /product="STAS domain-containing protein"
                     /calculated_mol_wt=15767
     Region          <27..90
                     /region_name="STAS"
                     /note="Sulphate Transporter and Anti-Sigma factor
                     antagonist domain found in the C-terminal region of
                     sulphate transporters as well as in bacterial and archaeal
                     proteins involved in the regulation of sigma factors;
                     cl00604"
                     /db_xref="CDD:445002"
ORIGIN      
        1 mnyklekkeq fvyieleepa fagdvpaafe etareifreg yhnlivnmqp vksvdaagta
       61 ilkkinwlca ndlgllvivt rdddfmdlle dlkipdmevl pskeeaidav fmhslenefg
      121 tgddgydded ydnvseskep
//
LOCUS       WP_235165030             386 aa            linear   BCT 02-MAR-2025
DEFINITION  glycan-binding surface protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235165030
VERSION     WP_235165030.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 386)
  AUTHORS   Tauzin,A.S., Kwiatkowski,K.J., Orlovsky,N.I., Smith,C.J.,
            Creagh,A.L., Haynes,C.A., Wawrzak,Z., Brumer,H. and Koropatkin,N.M.
  TITLE     Molecular Dissection of Xyloglucan Recognition in a Prominent Human
            Gut Symbiont
  JOURNAL   mBio 7 (2), e02134-e02115 (2016)
   PUBMED   27118585
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037325.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18329.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..386
                     /product="glycan-binding surface protein"
                     /GO_function="GO:0030247 - polysaccharide binding
                     [Evidence IEA]"
                     /calculated_mol_wt=42529
     Region          140..219
                     /region_name="IPT"
                     /note="Immunoglobulin-like fold, Plexins, Transcription
                     factors (IPT). IPTs are also known as Transcription factor
                     ImmunoGlobin (TIG) domains. They are present in
                     intracellular transcription factors, cell surface
                     receptors (such as plexins and scatter factor...; cd00102"
                     /db_xref="CDD:238050"
     Region          205..381
                     /region_name="SGBP_B_XBD"
                     /note="Surface glycan-binding protein B xyloglucan binding
                     domain; pfam18329"
                     /db_xref="CDD:465713"
ORIGIN      
        1 mknkyrsavl fallafmaaf qisckeddld nngepsityv rvtnpassds llvgalqsnl
       61 iaivgenlqd vteiwfndqk avltptyits ksilvsvpam vpkeisnkmr mifsngrtln
      121 hdfevqisep eltgmnceyv atggiating nyfyppltvt faggatgelv svtdqiiqvr
      181 vpqgalpgqv tvktafgetk sdfwfrdnrn iflsndpftg wwnqayvvtk pgagdpvain
      241 gnyirvkevv sgwqwkevag gppdamgpis knipdeailr padynlkfev ntlkpynnnl
      301 lkinvglakd fitdayqwap pydtkgewrt vtipfneiaa syenlgvkma vnpngyytrl
      361 lfhgggdlda dismdnfrvv pkilkk
//
LOCUS       WP_235165056             889 aa            linear   BCT 02-MAR-2025
DEFINITION  sialate O-acetylesterase [Dyadobacter chenhuakuii].
ACCESSION   WP_235165056
VERSION     WP_235165056.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 889)
  AUTHORS   Surolia,I., Pirnie,S.P., Chellappa,V., Taylor,K.N., Cariappa,A.,
            Moya,J., Liu,H., Bell,D.W., Driscoll,D.R., Diederichs,S.,
            Haider,K., Netravali,I., Le,S., Elia,R., Dow,E., Lee,A.,
            Freudenberg,J., De Jager,P.L., Chretien,Y., Varki,A.,
            MacDonald,M.E., Gillis,T., Behrens,T.W., Bloch,D., Collier,D.,
            Korzenik,J., Podolsky,D.K., Hafler,D., Murali,M., Sands,B.,
            Stone,J.H., Gregersen,P.K. and Pillai,S.
  TITLE     Functionally defective germline variants of sialic acid
            acetylesterase in autoimmunity
  JOURNAL   Nature 466 (7303), 243-247 (2010)
   PUBMED   20555325
REFERENCE   2  (residues 1 to 889)
  AUTHORS   Bitto,E., Bingman,C.A., McCoy,J.G., Allard,S.T., Wesenberg,G.E. and
            Phillips,G.N. Jr.
  TITLE     The structure at 1.6 Angstroms resolution of the protein product of
            the At4g34215 gene from Arabidopsis thaliana
  JOURNAL   Acta Crystallogr D Biol Crystallogr 61 (Pt 12), 1655-1661 (2005)
   PUBMED   16301800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015585.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03629.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..889
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..889
                     /product="sialate O-acetylesterase"
                     /calculated_mol_wt=100171
     Region          258..>371
                     /region_name="LacZ"
                     /note="Beta-galactosidase/beta-glucuronidase [Carbohydrate
                     transport and metabolism]; COG3250"
                     /db_xref="CDD:442481"
     Region          <412..528
                     /region_name="SASA"
                     /note="Carbohydrate esterase, sialic acid-specific
                     acetylesterase; pfam03629"
                     /db_xref="CDD:427409"
     Region          657..867
                     /region_name="CE4_GLA_like_6s"
                     /note="Putative catalytic NodB homology domain of gellan
                     lyase and similar proteins; cd10967"
                     /db_xref="CDD:200589"
     Site            order(664..665,716,720,771..773,843)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:200589"
ORIGIN      
        1 mrftrfllfl iflstnsvaq vrlpklisdn mvlqrdqpit vwgwakpkek vtvtfknkkq
       61 stltgedgkw kiqlpaqpag tgsemvikgk sqltirniaf gdvwlcngqs nmvinmervk
      121 erypddiata sypdirnffi ptltdlkgpq qdfpnaewka anpkdvlgfg avsyffardl
      181 ydqykvpigi inssvggtpi eawiseggyk dfadiqkvin enkdtayvqe rkqstlanap
      241 kpskstdpgl tehweidsyq pkgwrnfnip gywedqglkd lngvvwfrre fdlpeswigk
      301 pvklymgriv dademfvngk sigrvtyqyp prryeipagl lkagkntfvi rvtntagkgg
      361 fvpdkpyfmt asdqeidlkg twqykvgqvf epakrsddsp apfiaqnqpa alynamiapv
      421 lpmklkgflw yqgetnvhdp epynvllpal indrrklwnd dnlpflvvql pnfqdidflp
      481 aesnmallre aqnraltlkn tavavtldlg ewndihplsk keigqrlals aknlaygdkn
      541 vvhsgptlks qsiaadkivl tfdnvadgik sideqtlrwf amagddkkfv wanakilgkd
      601 qielssemvk tpkdiryawq dnpeginfyn sanlpaspfr tdgeqpdesk pwkgkkcavv
      661 ltyddalnvh ldnvipalds lslkgsfylt assdaarnri kdwravatsg helgnhtlyh
      721 pcdatgpgms wvkpeydlsk ysmgriqdev rmcnaflksi dgldkrtfaf tcghkkvaeg
      781 efiqtlssef iaaravrhem htfeeqklmd idcysmveqs gkdmielvkq aqqsgkllvf
      841 lfhgvggeha lnvsnqahse llhylkenek eiyvdtmrnv aehiqslkk
//
LOCUS       WP_235165132             443 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3748 domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235165132
VERSION     WP_235165132.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023980.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12566.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..443
                     /product="DUF3748 domain-containing protein"
                     /calculated_mol_wt=48537
     Region          82..198
                     /region_name="DUF3748"
                     /note="Protein of unknown function (DUF3748); pfam12566"
                     /db_xref="CDD:432640"
     Region          294..441
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
ORIGIN      
        1 mlscqtesyl qekqvtqdyg yhhdldnndn fspdgkwlvy dtrtdsggia esakiekvni
       61 etgekkvlfe iknnqiwgpg agavsyspvr qavvfihgla nstkenpyqq wrrtgviied
      121 anpnvpiymd ardvtfpftp galrggthrh ewsgdgkwig ftyndailka ledasgqkrn
      181 lrtigvstki rqvnvdknee nvsgewfsal vvrvvpnpep gsdqishaag dswvgtngyl
      241 lkngekqlar afigvvknkn gqdvsevfiv dipnditqpg elgplegtkd dfpmppkgas
      301 qrrvtftaet efpgctgivr sspdgtslay lakdkngveq iflisplgge prqltahgsn
      361 vsgnvrwrpd gkavgyiheg sisickigda pfeqrfvkit qptnpapsnl vwspdgktla
      421 fnrlvqkegk pasqqifvie vkm
//
LOCUS       WP_235165147            1282 aa            linear   BCT 02-MAR-2025
DEFINITION  hydantoinase B/oxoprolinase family protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235165147
VERSION     WP_235165147.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 1282)
  AUTHORS   Watabe,K., Ishikawa,T., Mukohara,Y. and Nakamura,H.
  TITLE     Cloning and sequencing of the genes involved in the conversion of
            5-substituted hydantoins to the corresponding L-amino acids from
            the native plasmid of Pseudomonas sp. strain NS671
  JOURNAL   J Bacteriol 174 (3), 962-969 (1992)
   PUBMED   1732229
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014585.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02538.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1282
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..1282
                     /product="hydantoinase B/oxoprolinase family protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=138538
     Region          136..1282
                     /region_name="PLN02666"
                     /note="5-oxoprolinase"
                     /db_xref="CDD:215358"
ORIGIN      
        1 mggsfwkiwv dtggtftdcl avdfagnktr lkvlssgcvr grivgkladk tfqyaaswaf
       61 dagllegytl rllendltsk visfdssnqt ftlendlpfa qntdfeifsg eeapvlaarl
      121 ltktkltetl pplemrlgtt rgtnallerk gaktllvvtk gfkdllyign qqrpslfqid
      181 ipeprllyse vleiderlda sgnviqelna aelttlasaa nadsiaisll hsyqnnahel
      241 maekafleng akyisvsskl fpfshflrrt qtavvnayld pvldqyltni knslgdtplg
      301 giplgdtplg dnslggnpls tgslkvmtst gslsevsgfr akdsllsgpa ggmvaaanag
      361 krlgfpklit fdmggtstdt alidgrpelk yiteidgief hnptlaietv aagggsvcwf
      421 dgfslqvgpe sagaspgpac ygtggpltit dvnlllgkld askfgipvra daalaalhnl
      481 qkgiesqtgn vlsfselltg lerianekma dairkisvek ginpadfali tfggagglhs
      541 cqlaelldiq tviipydagl fsavgmgeal istivskqil lpwkesadki ehwknellqe
      601 gaanlqdqgv tafetafcyv ylrfagqent ievsyegaet lnafeklyta qfgyfpanlt
      661 ieleslklmi qektapiale tiikegnsad airsvtplfe tkssetekpe ardaanlfew
      721 dklaagdqlt gpaillnnts tayipknwkl iiqnskdaia fktsethmta ekqseevalq
      781 lftnrfksia demgvqlqrt afsvnvkerl dfscalldqd gellvnaqhi pvhlgsmgic
      841 grlvkdaiei gpgdviitnh pkyggshlpd itlisgiyte dktcigyvin rahhaevggk
      901 tpgsmppdat claeegvvil pqyliknnvf qwetiralft egpyptrhfl sneadiiaal
      961 salrkgseqm lrlvdlhgle tvrkymrllk enavaqlqta liplqnkife ateflddghr
     1021 iqvkvsitae kqvfdftgts dvhpnnlnan isilysaily vlrllankei plndglmkhv
     1081 diilpdnsfl hpnfsddpfq cpavvggnte vsqrlvdtll kafglaacsq gtmnnflfgd
     1141 eqfgyyetig ggtgagpgfh grsavhqhmt ntritdpeql erkypvhlle fgirknsggk
     1201 gtfnggdgiv rqfeflkplq ltllgqhrky apyglngged gkcgihtlvs ngettslpgi
     1261 csleaqkgdi liietpgggg fg
//
LOCUS       WP_235165156             157 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6934 family protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235165156
VERSION     WP_235165156.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046175.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22028.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..157
                     /product="DUF6934 family protein"
                     /calculated_mol_wt=17778
ORIGIN      
        1 mkhnkyisra ndsfllyhft skgpkgsiqk sviysktave niynlafgdy npisdeindl
       61 sisnngdsvr vlatvaatly tftekypeaw itatgstkar trlyrmgian nlaeiieefa
      121 ifgynckghw eqfvvgedye vflltrkety tswkean
//
LOCUS       WP_235165168             659 aa            linear   BCT 02-MAR-2025
DEFINITION  sialate O-acetylesterase [Dyadobacter chenhuakuii].
ACCESSION   WP_235165168
VERSION     WP_235165168.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 659)
  AUTHORS   Surolia,I., Pirnie,S.P., Chellappa,V., Taylor,K.N., Cariappa,A.,
            Moya,J., Liu,H., Bell,D.W., Driscoll,D.R., Diederichs,S.,
            Haider,K., Netravali,I., Le,S., Elia,R., Dow,E., Lee,A.,
            Freudenberg,J., De Jager,P.L., Chretien,Y., Varki,A.,
            MacDonald,M.E., Gillis,T., Behrens,T.W., Bloch,D., Collier,D.,
            Korzenik,J., Podolsky,D.K., Hafler,D., Murali,M., Sands,B.,
            Stone,J.H., Gregersen,P.K. and Pillai,S.
  TITLE     Functionally defective germline variants of sialic acid
            acetylesterase in autoimmunity
  JOURNAL   Nature 466 (7303), 243-247 (2010)
   PUBMED   20555325
REFERENCE   2  (residues 1 to 659)
  AUTHORS   Bitto,E., Bingman,C.A., McCoy,J.G., Allard,S.T., Wesenberg,G.E. and
            Phillips,G.N. Jr.
  TITLE     The structure at 1.6 Angstroms resolution of the protein product of
            the At4g34215 gene from Arabidopsis thaliana
  JOURNAL   Acta Crystallogr D Biol Crystallogr 61 (Pt 12), 1655-1661 (2005)
   PUBMED   16301800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015585.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03629.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..659
                     /product="sialate O-acetylesterase"
                     /calculated_mol_wt=72259
     Region          <227..324
                     /region_name="SASA"
                     /note="Carbohydrate esterase, sialic acid-specific
                     acetylesterase; pfam03629"
                     /db_xref="CDD:427409"
     Region          581..656
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mlsisangqi iltapannqi vqrnlsgfas iaitayayrp ytsvagrlvp ikgnvhrekv
       61 wdfeeeqvrq gfltasvqae tgwyklkisa vaengdidsi svdrvgvgev flvagnsnam
      121 glpglgakst sdqvvsfnav nkqlnaenit vapnepmrkp tfevlkkdnf ifpsgetawy
      181 wgelgdsisk rfktpvlfln aawaaansds yydaatgkda fnpyvgknwp nrqpysnivn
      241 tirhlnswlg iravlwshge ndaqlkfteq nyfnniqtli tnaradagyn lpwviarnsa
      301 sniikdpylp vinaqkrlsa lknfntfpgp nldtiqiprp vsehfenvpg giqgltlaas
      361 awnraltdsl frkiipiqpt nsihtgvvps tafpgasfyl gynihgqqaw plslraelfd
      421 eggkfidtvg igsanpmlvk lpanlangny sirlagttpn lagststlfy vnnayrsvqv
      481 vnaisavkan qvfnlkwlva snpgmqrmvl ekttngdiyt dlqqynvpdn gtgsgvyayt
      541 dtntdskiif yrvrmeytdg rnsyspvvti lepgalprlv afpnpvtrqa fyletddidp
      601 vpqlslydag grahplfvsd reiigllavr tlyplpagiy ilriatetgt htqrmvfin
//
LOCUS       WP_235165175             851 aa            linear   BCT 02-MAR-2025
DEFINITION  PspC domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235165175
VERSION     WP_235165175.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 851)
  AUTHORS   Brissette,J.L., Weiner,L., Ripmaster,T.L. and Model,P.
  TITLE     Characterization and sequence of the Escherichia coli
            stress-induced psp operon
  JOURNAL   J Mol Biol 220 (1), 35-48 (1991)
   PUBMED   1712397
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015957.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04024.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..851
                     /product="PspC domain-containing protein"
                     /calculated_mol_wt=92797
     Region          140..221
                     /region_name="PspC"
                     /note="Phage shock protein PspC (stress-responsive
                     transcriptional regulator) [Transcription, Signal
                     transduction mechanisms]; COG1983"
                     /db_xref="CDD:441586"
     Region          226..289
                     /region_name="PspC"
                     /note="Phage shock protein PspC (stress-responsive
                     transcriptional regulator) [Transcription, Signal
                     transduction mechanisms]; COG1983"
                     /db_xref="CDD:441586"
     Region          667..849
                     /region_name="DUF2807"
                     /note="Putative auto-transporter adhesin, head GIN domain;
                     pfam10988"
                     /db_xref="CDD:431583"
ORIGIN      
        1 mkktisinig giifhieedg yeklkgylss iqkyfssfad skeilsdieg riaerflnkq
       61 kaeakqvisl sdvdeliaam gtvadfeaie qaediladpl esaaskgyap reetyssass
      121 sssssysapk tepapfaapk klyrdlkrkl lggvaaglah yftidplwvr laflffvigl
      181 pagsgmmnln medefgpfsg fmvlvyiamw vafpgsttle edtkikkfyr dpdrkvvggv
      241 aagvasyfgv dlgvvrflwv lsillfgtgv lvyiilwvia pvantltekm emqgepitls
      301 niesnikhgl nldektgeeh ivtkiflfpf raialvigal grmlkglgpi iriligaflv
      361 atavmgllgl iiaggvalgv tssaafdnlp lpflifqelp svlilsgflv saiplvtfll
      421 lgltlisnkr ivggsvwltl lglwivgiig atiggisyqr nfakrgevvq svsypapsgt
      481 ltldynyind eenvdvgirl vgytatsdsi rldktlyarg rsrqdaekna selaydidvk
      541 dsvfifkegp ilaghgpfrd qridlalhip fnkpfvmkrd fyftmnrwdq kttdrydldn
      601 devdfntlkw emrqdsglic vnlpakflks dteennenag ysfdyednsd lelgergnys
      661 kqfpvgdfnk idiggaysii irqgneynvt adseepadvd dlkvyvengt lrvtrnkefs
      721 lfdsdkwkri glvitmpkie nlslsgankt lvsgftglgk lavdisgask seinveadql
      781 evsisgaska tlkgsarsvn ldasgackld avglniqtad vdasgaskve lgripsirrh
      841 tsgaskinvq e
//
LOCUS       WP_235165191             757 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235165191
VERSION     WP_235165191.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 757)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 757)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 757)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 757)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..757
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=82492
     Region          8..753
                     /region_name="UvrA"
                     /note="Excinuclease UvrABC ATPase subunit [Replication,
                     recombination and repair]; COG0178"
                     /db_xref="CDD:439948"
ORIGIN      
        1 mnykqkamyq efieirgare nnlknvslri pkrkitiftg vsgsgkssiv fdtiateaqr
       61 qlnenfsmfi rnflpkyaqp hadaienlsm aivvdqrrlg gnshstlgti tdispvlrll
      121 fsrigkphig nsnafsfndp qgmcpecngi gkkmgvvads fldmskslne gavqvpvfat
      181 wekssyassg ffdndkklsd ftdeemklll ygkdlkyklq vgggtmnaty lgviekfeks
      241 yikrdiktls ertqksvapy ialkpcpsch garlsqaaln ckidgrniae msamevselv
      301 sliskikdpl aasmvatlse rlqhlvdigl eylsldrett tlsggesqrv kmvkhlsssl
      361 idvmyifdep svglhprdvh rlnellgklr dkgntvivve hdpdvikvad hivdvgphag
      421 skggnivfeg tyaelvkadt ltgrhikqsl plkeksrkas gklsvknakv nnlhnvsvdi
      481 pggvltvvtg vagsgkssli nhvflkqhpk aividqsavg tstrsnpaty tgvmddvrka
      541 fakengvsas lfsfnsqgac pncqglgviy tdlafmdgik tpceiwqgkr fkeevlaykl
      601 dgksisdile mtvlqaldyf tqkdilhklq amsdvgldyl tlgqplstls ggecqrikla
      661 selhkkgsiy vldepttglh msdithllsi mnrlvdagnt miviehnldv iknadwiidm
      721 gpdggtkggk vvfegtpvdl lsaegsitsl ylknata
//
LOCUS       WP_235165236             424 aa            linear   BCT 02-MAR-2025
DEFINITION  relaxase/mobilization nuclease domain-containing protein
            [Dyadobacter chenhuakuii].
ACCESSION   WP_235165236
VERSION     WP_235165236.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 424)
  AUTHORS   Meyer,R.
  TITLE     Identification of the mob genes of plasmid pSC101 and
            characterization of a hybrid pSC101-R1162 system for conjugal
            mobilization
  JOURNAL   J Bacteriol 182 (17), 4875-4881 (2000)
   PUBMED   10940031
REFERENCE   2  (residues 1 to 424)
  AUTHORS   Bravo-Angel,A.M., Gloeckler,V., Hohn,B. and Tinland,B.
  TITLE     Bacterial conjugation protein MobA mediates integration of complex
            DNA structures into plant cells
  JOURNAL   J Bacteriol 181 (18), 5758-5765 (1999)
   PUBMED   10482518
REFERENCE   3  (residues 1 to 424)
  AUTHORS   Byrd,D.R. and Matson,S.W.
  TITLE     Nicking by transesterification: the reaction catalysed by a
            relaxase
  JOURNAL   Mol Microbiol 25 (6), 1011-1022 (1997)
   PUBMED   9350859
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015397.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03432.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..424
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /calculated_mol_wt=47763
     Region          7..>190
                     /region_name="Relaxase"
                     /note="Relaxase/mobilization nuclease domain; cl21589"
                     /db_xref="CDD:451322"
ORIGIN      
        1 mvavihtssr fravmqynek kleqghaeci sainypkdad alsfdqklnr iqrqlalnkr
       61 tkvntvhvsl nfdpseklsk eqlteiskay lkgigfekqp alvyehrdag hphvhivttn
      121 ikadgsrisl hnlgknqsek trkeieidfg lvkaqdrkaq efnlkpvsik aeygksetkk
      181 aianvldkvl neykfttmge lnaalnhynv aadigsegsr irknngilyr vldkdgnrig
      241 vpikasdfhf kpthrnlkvr flynemnpnr tkdslrvkns idftlyrkqn vslprlinil
      301 qkdgidtvir kneegklygi tyldhrtkcv fngsalgkqy sakgiterci edpfslqqqk
      361 sqkmgldvgq vagagnvyhv gngsslendk sldsllspvk dgeytphqlk kpkrkkqkgf
      421 sigf
//
LOCUS       WP_235165302             186 aa            linear   BCT 02-MAR-2025
DEFINITION  YceI family protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235165302
VERSION     WP_235165302.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Handa,N., Terada,T., Doi-Katayama,Y., Hirota,H., Tame,J.R.,
            Park,S.Y., Kuramitsu,S., Shirouzu,M. and Yokoyama,S.
  TITLE     Crystal structure of a novel polyisoprenoid-binding protein from
            Thermus thermophilus HB8
  JOURNAL   Protein Sci 14 (4), 1004-1010 (2005)
   PUBMED   15741337
REFERENCE   2  (residues 1 to 186)
  AUTHORS   Stancik,L.M., Stancik,D.M., Schmidt,B., Barnhart,D.M.,
            Yoncheva,Y.N. and Slonczewski,J.L.
  TITLE     pH-dependent expression of periplasmic proteins and amino acid
            catabolism in Escherichia coli
  JOURNAL   J Bacteriol 184 (15), 4246-4258 (2002)
   PUBMED   12107143
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016176.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04264.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..186
                     /product="YceI family protein"
                     /calculated_mol_wt=20447
     Region          5..>67
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(29..31,34..37)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350701"
     Region          <61..186
                     /region_name="YceI"
                     /note="Polyisoprenoid-binding periplasmic protein YceI
                     [General function prediction only]; COG2353"
                     /db_xref="CDD:441920"
ORIGIN      
        1 mkmhlsamvf vtvlasalps gpllaqgkfg tstgntkfss vtplenvnae nkksqvilnt
       61 anneiairmn mrefvfpnkl mqehfnenyi esekyptatf sgkvdnapdy tkdgqydvsa
      121 tgkftvhgvt kertikgkmk iesgkitins dfevpltdhk ievpqvvfvk iaqvisvkaq
      181 yvltak
//
LOCUS       WP_235165303             295 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5777 family beta-barrel protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235165303
VERSION     WP_235165303.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040196.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19089.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..295
                     /product="DUF5777 family beta-barrel protein"
                     /calculated_mol_wt=33092
     Region          42..284
                     /region_name="DUF5777"
                     /note="Membrane bound beta barrel domain (DUF5777);
                     pfam19089"
                     /db_xref="CDD:436955"
ORIGIN      
        1 mkllrlmmml tcsttvlyaq ddllselskq dsmvtvpvsa tfkstrvvng hsietmkkkh
       61 ldfrishrfg rlnsgayqff gldqatmrmg feygvtddfm igvgrstsqk vydffgklkv
      121 lkqsdgarni pvsvtlfggt gvatvnkele fqdklyysaq vliarkfger lslqlsptfl
      181 hrnkpevfgd ekvllalgvg grfklskrvs lngeyfytar ekntvtapyy dsmsfgvdie
      241 tgghvfqlhf tnslgmiekq figettgtwg kgdihygfni srtfsfdkkn kkvan
//
LOCUS       WP_235165414             513 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6973 domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235165414
VERSION     WP_235165414.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046734.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22322.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..513
                     /product="DUF6973 domain-containing protein"
                     /calculated_mol_wt=55843
ORIGIN      
        1 mqklslfrri ascisfllvf vfafsnqscr ddldtksspe kspaekflat edrmlsydqf
       61 lgqvkgfedk emydhfrssa ekslrsseki visfpilpst tdsvrkltin nhttytipvy
      121 rrshtgtvfr niiidstdag vkaylawyfp dkkwiqeykk drkrsfygtv imnnydglps
      181 sgrpegranl vpvcasvmvl ssivehlcch nsqhtscgcp tgskyyfeyq ystvttcids
      241 yidafggygg sgggtgggsg ggtvpnpggg ydpcvqpktg tgktpctpnt pdpgpvvvpn
      301 aaaaplvsla kakgiiftst eiavlneldq pmlaritdlf ssfadkvtkn ygelmliltg
      361 eafnakenea ldaladnves fkrimrfmya anayaaqkft stkynafgst cnnckgnafk
      421 halfiilnae tfskesaltl aaghengqld mdtqmdnknn aagvsifdkf ngsgtafqwa
      481 drvkeatnlg qyglvfvkns vlvstsnvdp tcp
//
LOCUS       WP_235165463             109 aa            linear   BCT 02-MAR-2025
DEFINITION  plasmid mobilization protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235165463
VERSION     WP_235165463.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 109)
  AUTHORS   Rehman,S., Li,Y.G., Schmitt,A., Lassinantti,L., Christie,P.J. and
            Berntsson,R.P.
  TITLE     Enterococcal PcfF Is a Ribbon-Helix-Helix Protein That Recruits the
            Relaxase PcfG Through Binding and Bending of the oriT Sequence
  JOURNAL   Front Microbiol 10, 958 (2019)
   PUBMED   31134011
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046164.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21983.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..109
                     /product="plasmid mobilization protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=12365
     Region          20..109
                     /region_name="MbpA"
                     /note="mobilization protein MbpA; NF041418"
                     /db_xref="CDD:469309"
ORIGIN      
        1 mqensqddfr alnsikrenk nrtiplrvtn heyasikska tlaglsvsey lrklgtghpv
       61 qarfdkdekr nlqgigtnln qlaafankgy fyqksitevl eelkrilkk
//
LOCUS       WP_235165473             993 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6270 domain-containing protein [Pseudomonas].
ACCESSION   WP_235165473
VERSION     WP_235165473.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039710.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19786.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..993
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..993
                     /product="DUF6270 domain-containing protein"
                     /calculated_mol_wt=111760
     Region          8..227
                     /region_name="DUF6270"
                     /note="Family of unknown function (DUF6270); pfam19786"
                     /db_xref="CDD:466185"
     Region          749..939
                     /region_name="Hepar_II_III"
                     /note="Heparinase II/III-like protein; pfam07940"
                     /db_xref="CDD:429747"
ORIGIN      
        1 mnpfriliag scvsrdilny dtehafelsa yyarssfasa fatvktddrf sqnikskfqa
       61 avvnadlekh lqqslaqtef dillvdlide rfnifcesrg giftlsnelf sggfnsdsgs
      121 gaiikafsdd fynkwvcgwr rfisqmkttn qlhkviihkt fwstftqtgn tyaphftdvq
      181 intanhflqr lynraaedvp dtqfieplst llqgadehkw gvspfhyidd yysfmlekik
      241 slasilrtvk tepsmdsrav tllnpdrsie ssllftnsvd nnhryalrpd lfkgnarttk
      301 tasglkfife nasethqvrf klpiacvvdg lnvrfkisew qslnylaigy vvgsdyhhvk
      361 ivhtlrdqwv dfslgysdla fgiqnnwqrp pasealevkl ffkgrplpqg stleieeiac
      421 wkessefpfw ldappnypag nvnaaaglek nlvhstytyl gkcfrdvgaq vtsflsdgtc
      481 plygnknlpw psdnrlpdtl gdvgtyrfsw halhpatmmm mharttgnla tvfsardfin
      541 qwldhsyfsn dpdkkfawyd hgtaerllsl ilmcdlgaky qfdtrfmtrl rgaifkhaql
      601 lssemfyssh qvsryhnhaw fqdvallaaa lalpelpcaq lwtttalkrl edqlekliir
      661 dngyavfien sigyhqgvqr llsfagelal lsgrptdipa ianelirfse llkypdnrap
      721 aqgdtfrrkn pggrpsfppk pykennvtll pkagyaiikg nhedraymls vfatslcqth
      781 khednlsftl fmdgiewlid psfysheyak plqkflrsaw ahnnvvavgh tysilpgkae
      841 lsgtsnescf tlagrhtaye nlevsrrisg didqlnftit dcvtgnthgn tlslfhcgdg
      901 vtvntlgnvi qlshpasdyh ilitsecevr vvngwlderd inavtglgfm edvptsvvay
      961 tlpqaqassf sitaskvgst ynpqhalqse skk
//
LOCUS       WP_235165486             818 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: AAA family ATPase [Pseudomonas].
ACCESSION   WP_235165486
VERSION     WP_235165486.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
REFERENCE   1  (residues 1 to 818)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 818)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019348.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07728.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..818
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=92704
     Region          <92..>425
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          283..>665
                     /region_name="McrB"
                     /note="5-methylcytosine-specific restriction endonuclease
                     McrBC, GTP-binding regulatory subunit McrB [Defense
                     mechanisms]; COG1401"
                     /db_xref="CDD:441011"
ORIGIN      
        1 maknnrnapy sapiggasap aktanrvqle kqvpmwsasf gnasklysgv slapdfsvde
       61 aflsklvahi sdddskafst wierfaqfck dlgkradtll eeyeerwelt nqagrecdar
      121 mqqlderqav levqheaqal rqaefervrq rqaqadgela qrerevklre vnaeagfaeq
      181 nrlalvvlee rqrmlgeqhd seigllqeek qalnqelrql arqladvkfr cteaeaarad
      241 vldtredala qreqqvedrt rrldrewaav keakatqqdq varemeqern gfareverve
      301 trerkawamv dksanelsel qllkaqlgdq satvlldels alrednrall trleqsdaae
      361 lqgendklrq hvadlgmqia dimpkyekan revgmtrvaa tdlewserkr rvlethatvl
      421 darindlatt veqltnaqkt qtpfpamslm dthkdyraga eleevqdlgp favelqhria
      481 taeasvklfy piedirvllg glamsqlhvf qgisgtgkts lakafakamg gfctdiavqa
      541 gwrdrddllg hynaferrfy ekdclqalyk aqtprwddac nvvlldemnl srpeqyfsef
      601 lsalekndpr erlislseva lsgaplnlkn grkilvpnnv wfigtanhde stseladkty
      661 drahvmtlpk qdagfviqpy ekkrysffsl qkafnracll hempvkdllg rltrdeftqq
      721 lashfdlgwg nrfekqalrf ipvmletgas egqaldhlls trvmrkgkvt grydvgttdv
      781 telmsalesf wikanlkgdp vksldlltad ikrreghr
//
LOCUS       WP_235164779             221 aa            linear   BCT 02-MAR-2025
DEFINITION  dihydrodipicolinate reductase C-terminal domain-containing protein
            [Dyadobacter chenhuakuii].
ACCESSION   WP_235164779
VERSION     WP_235164779.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 221)
  AUTHORS   Scapin,G., Reddy,S.G., Zheng,R. and Blanchard,J.S.
  TITLE     Three-dimensional structure of Escherichia coli dihydrodipicolinate
            reductase in complex with NADH and the inhibitor
            2,6-pyridinedicarboxylate
  JOURNAL   Biochemistry 36 (49), 15081-15088 (1997)
   PUBMED   9398235
REFERENCE   2  (residues 1 to 221)
  AUTHORS   Reddy,S.G., Scapin,G. and Blanchard,J.S.
  TITLE     Interaction of pyridine nucleotide substrates with Escherichia coli
            dihydrodipicolinate reductase: thermodynamic and structural
            analysis of binary complexes
  JOURNAL   Biochemistry 35 (41), 13294-13302 (1996)
   PUBMED   8873595
REFERENCE   3  (residues 1 to 221)
  AUTHORS   Scapin,G., Blanchard,J.S. and Sacchettini,J.C.
  TITLE     Three-dimensional structure of Escherichia coli dihydrodipicolinate
            reductase
  JOURNAL   Biochemistry 34 (11), 3502-3512 (1995)
   PUBMED   7893645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017024.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05173.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..221
                     /product="dihydrodipicolinate reductase C-terminal
                     domain-containing protein"
                     /GO_function="GO:0008839 -
                     4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]"
                     /GO_process="GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /calculated_mol_wt=24409
     Region          <92..196
                     /region_name="DapB_C"
                     /note="Dihydrodipicolinate reductase, C-terminus; cl42082"
                     /db_xref="CDD:477943"
ORIGIN      
        1 mkvfvvgsgk lasailsaaa tfqncglipw epefqqttek amilhcgsgr qiaecikfcq
       61 qtgsafiels tgletehmtp nfpliicpnt smlmlrtmam lgqfgrhfkd yqisiteshq
      121 aakqtepgta ynfanslafp vdqivsvrep etqsieigip deflgkhayh kitiqddnda
      181 ltietkvlgh asyaagvrqi idlilktdle nrrynvlelm q
//
LOCUS       WP_235165535             585 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Dyadobacter chenhuakuii].
ACCESSION   WP_235165535
VERSION     WP_235165535.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 585)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..585
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=66373
     Region          <194..566
                     /region_name="TMAO_torS"
                     /note="TMAO reductase sytem sensor TorS; TIGR02956"
                     /db_xref="CDD:274362"
ORIGIN      
        1 mnkstytnef nelwkkesel ksrwgniifc vaylvgypat silyflrkdp afpevlaael
       61 vlsgviifll tlhftgrlsa qkasfytnla lvpvhayila evphasydra slnmtlglmf
      121 sffvlrwpvq ysiiltvcvm tifppalyyr hpgylynffs qgglffflgq mlfpfmmyfh
      181 esrnkheffy lfslaeqndl lekqkqiaed atlaksefls tmsheirtpl ngivgivhll
      241 eenksrseee melietlkfs sihlmavvnd ildfnkinsn hvklhpvtfd ieelfknlyn
      301 sflprarekg lelsadlspn lpqlrgdqvr lsqvinnlih naikftdsgf vkfsvkeler
      361 tndgiiklef avsdtgigis edqqsnvfei ftqvrslvkr qdggtglgla isrelvrlfg
      421 gelrlksklg dgsvfsfqia lpysvtvedp aksekvptpa lnkgskvlvv ddnatnlifa
      481 tsllkrknip fdlasdgkqa vdkyfsdrfd lifmdlrmpv mdgfeatsmi rkrdpqipiv
      541 altasafede reralangft dylvkpflpp dfykivyahi gvenq
//
LOCUS       WP_235165603             663 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase domain-containing protein [Escherichia coli].
ACCESSION   WP_235165603
VERSION     WP_235165603.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 663)
  AUTHORS   Rice,P. and Mizuuchi,K.
  TITLE     Structure of the bacteriophage Mu transposase core: a common
            structural motif for DNA transposition and retroviral integration
  JOURNAL   Cell 82 (2), 209-220 (1995)
   PUBMED   7628012
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014911.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02914.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..663
                     /product="transposase domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=74886
     Region          8..143
                     /region_name="HTH_Tnp_Mu_1"
                     /note="Mu DNA-binding domain; pfam02316"
                     /db_xref="CDD:367032"
     Region          149..256
                     /region_name="HTH_Tnp_Mu_2"
                     /note="Mu DNA binding, I gamma subdomain; pfam09039"
                     /db_xref="CDD:370256"
     Region          257..473
                     /region_name="DDE_2"
                     /note="Bacteriophage Mu transposase; pfam02914"
                     /db_xref="CDD:397179"
     Region          486..556
                     /region_name="Mu-transpos_C"
                     /note="Mu transposase, C-terminal; pfam09299"
                     /db_xref="CDD:430512"
ORIGIN      
        1 melwvspkec anlpglpkts agviyvakkq gwqnrtragv kggkaieyna nslpveakaa
       61 lllrqgeiet slgrfeiarp tleahdydre alwskwdnas dsqrrlaekw lpavqaadem
      121 lnqgistkta fatvaghyqv sastlrdkyy qvqkfaksdw aaalvdgrga srrnvhksef
      181 dedawqflia dylrpekpaf rkcyerlela arehdwnips ratvfrriqq ldeamvvacr
      241 egehalmhli paqqrtvehl damqwingdg ylhnvfvrwf ngdvirpktw fwqdvktrki
      301 lgwrcdvsen idsirlsfmd vvtrygiped fhitidntrg aankwltgga pnryrfkvke
      361 ddpkglfllm gakmhwtsvv agkgwgqakp verafgvggl eeyvdkhpal agaytgpnpq
      421 akpdnygdra vdaelflktl aegvamfnar tgretemcgg klsfddvfer eyartivrkp
      481 teeqkrmlll paeavnvsrk geftlkvggs lkgaknvyyn malmnagvkk vvvrfdpqql
      541 hstvycytld grficeaecl apvafndaaa greyrrrqkq lksatkaaik aqkqmdalei
      601 aellpqiaep aapesrvvgi frpsgntvqv kyqepddeye tdrdeylnhs ldileqnrrk
      661 kai
//
LOCUS       WP_235165663             307 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1376 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235165663
VERSION     WP_235165663.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018785.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07120.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>307
                     /product="DUF1376 domain-containing protein"
     Region          19..131
                     /region_name="YdaU"
                     /note="Uncharacterized conserved protein YdaU, DUF1376
                     family [Function unknown]; COG3756"
                     /db_xref="CDD:442970"
     Region          <204..276
                     /region_name="DnaT"
                     /note="DnaT DNA-binding domain; cl46275"
                     /db_xref="CDD:480615"
ORIGIN      
        1 mlfvlivshr aasygaimaa lpymqlyiad yladtmhlsa eehgaylllm fnywqtgkpi
       61 pknrlakisr ltnerwadve pslreffcdn gdewvhlrie edlasvrekl tkksaagkas
      121 vqarrsrkea diqkkqerdl tgvqtnvgvv fehdantkat nkdtdtdlke lnpthsarvr
      181 esaptsesng lplqaaepdy leglsepigk fpmtdgwnps pdfrrraalw gaappepeft
      241 paelaafrdy waaegkvftq vqweqkfarh vnhvraqvkp vskgvnhaak pggtasravq
      301 eiraare
//
LOCUS       WP_235165752             117 aa            linear   BCT 02-MAR-2025
DEFINITION  phage GP46 family protein, partial [Escherichia coli].
ACCESSION   WP_235165752
VERSION     WP_235165752.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019055.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07409.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..117
                     /product="phage GP46 family protein"
     Region          <1..113
                     /region_name="gp46"
                     /note="Mu-like prophage protein gp46 [Mobilome: prophages,
                     transposons]; COG4381"
                     /db_xref="CDD:443507"
ORIGIN      
        1 liclftdara ddddvipdgs gdprgwpgdt ysdfswgsrl wllereklte dvrlrvedya
       61 qlsmqpllra gyarnatvta riivpdciaf qvvltrpdkt tltieitrrw eatinav
//
LOCUS       WP_235165764             871 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235165764
VERSION     WP_235165764.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024554.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13155.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..871
                     /product="toprim domain-containing protein"
     Region          156..249
                     /region_name="Toprim_2"
                     /note="Toprim-like; pfam13155"
                     /db_xref="CDD:463793"
ORIGIN      
        1 fkeennylry gvcpqcgkke lftslerpyi vhcgrenkcg adlltkelyp dvfsswsdry
       61 istkddpyaa avaylqearn iaveplkgaf tqeryqdkes geqaatvrft ladgvwweri
      121 idrperfark anfsgsykgl wwaypgadls kakeiwiceg ifdaislnqn giaavsvmsa
      181 vnypdkslee laklcgdnpr pvivwaldng rageryakkh aersaedgwr taaalpgkns
      241 nkrdwndlhi agklrghdvk ryryygdlll aksprdkali mfsfrerkef yfpfdnrifw
      301 fkldierhmk avervinern vdenearkia lkesgavkei ancnpvplyy irnndtdeaw
      361 yyfrvtfpdg atvkntftsg qltsasefkk rllhvakggi ytgttahlda likndlpaik
      421 nvigqdfigy nkeigawlfn dvavcngkty eineedyfei dginakplnk kpilqinykk
      481 pdefttswve dlwlafgekg iitlafwlgs lfseqirqkn asypfleitg epgtgkttli
      541 dfcwrlcgrd nyegvdptkg sesgwkrtfg qvaglpvvli eadrgdnaqk rgafdfdnlk
      601 slyngggigv rgvktndnat ydpvfkgavv iaqnatvnas saiierlvri ytdkkrhspd
      661 srlaakrlel ypveqvsgfi hravsqerai mdlfmalsdp etarlyscen irhqriaknh
      721 aqlialvrvl kcvidipdew ldatcleler maeeqakavm ddlpevmafw eafdyldgit
      781 aygvnhfgkg rqnefavsip qleqvaavhh vkiqtnpemi kllkagrsrs ligykpvrse
      841 vsrqanagrg iaearekevl kcwifsnkeg a
//
LOCUS       WP_235165760             498 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail sheath subtilisin-like domain-containing protein
            [Escherichia coli].
ACCESSION   WP_235165760
VERSION     WP_235165760.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 498)
  AUTHORS   Xue,Q. and Egan,J.B.
  TITLE     Tail sheath and tail tube genes of the temperate coliphage 186
  JOURNAL   Virology 212 (1), 218-221 (1995)
   PUBMED   7676633
REFERENCE   2  (residues 1 to 498)
  AUTHORS   Temple,L.M., Forsburg,S.L., Calendar,R. and Christie,G.E.
  TITLE     Nucleotide sequence of the genes encoding the major tail sheath and
            tail tube proteins of bacteriophage P2
  JOURNAL   Virology 181 (1), 353-358 (1991)
   PUBMED   1825255
REFERENCE   3  (residues 1 to 498)
  AUTHORS   Arisaka,F., Ishimoto,L., Kassavetis,G., Kumazaki,T. and Ishii,S.
  TITLE     Nucleotide sequence of the tail tube structural gene of
            bacteriophage T4
  JOURNAL   J Virol 62 (3), 882-886 (1988)
   PUBMED   2963141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04984.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..498
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
                     /calculated_mol_wt=53288
     Region          1..491
                     /region_name="gpL"
                     /note="Mu-like prophage tail sheath protein gpL [Mobilome:
                     prophages, transposons]; COG4386"
                     /db_xref="CDD:443512"
ORIGIN      
        1 mtisfsavps ntlvplfyae mdnsaantav tsapalligh asndaaievn slvlmpsady
       61 arqicgagsq larmvdvyrq tdpfgelyvi avpeakgaaa tvrvtvtgea eesgtlslyv
      121 grsrvqvpvv ngddatavat aikeavngvi tlpfaassda gvvtltarhk glygnelpvc
      181 lnyygsggge ilpaglqvvt eagtagsgap dltaavaamg deafdfiglp fndtasinmm
      241 mtemndssgr wsyarqlygh vytaklgtls elvdagdmhn qqhitlagye ketqspvdel
      301 vasrlareav firndparpt qtgelvgmlp apkgkrfimt eqqtllshgv atayveggtl
      361 riqrsvttyk knaygvadns yldsetlhts ayvlrklksv itskygrhkl andgtrfgpg
      421 qaivtpavik gellatyrqm eragivenyd lfkqyliver dadnpnrlnt lfppdyvnql
      481 rvfavvnqfr lqyseesa
//
LOCUS       WP_235165676              96 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase gpP N-terminus-related DNA-binding protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235165676
VERSION     WP_235165676.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 96)
  AUTHORS   Catalano,C.E.
  TITLE     The terminase enzyme from bacteriophage lambda: a DNA-packaging
            machine
  JOURNAL   Cell Mol Life Sci 57 (1), 128-148 (2000)
   PUBMED   10949585
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017834.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06056.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..96
                     /product="terminase gpP N-terminus-related DNA-binding
                     protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0019069 - viral capsid assembly [Evidence
                     IEA]"
                     /calculated_mol_wt=10813
     Region          <15..38
                     /region_name="FliA"
                     /note="DNA-directed RNA polymerase specialized sigma
                     subunit [Transcription]; COG1191"
                     /db_xref="CDD:440804"
     Region          <30..92
                     /region_name="PRK06930"
                     /note="positive control sigma-like factor; Validated"
                     /db_xref="CDD:180757"
ORIGIN      
        1 makktltike rafnyhvkgl tfseigklld lsprtverys qvdewkaran qvvlpqrake
       61 lrgrgfsctt iaqmigvsks tvsnylrrae vknkak
//
LOCUS       WP_235165231             539 aa            linear   BCT 02-MAR-2025
DEFINITION  carbamoyltransferase C-terminal domain-containing protein
            [Dyadobacter chenhuakuii].
ACCESSION   WP_235165231
VERSION     WP_235165231.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 539)
  AUTHORS   Parthier,C., Gorlich,S., Jaenecke,F., Breithaupt,C., Brauer,U.,
            Fandrich,U., Clausnitzer,D., Wehmeier,U.F., Bottcher,C., Scheel,D.
            and Stubbs,M.T.
  TITLE     The O-carbamoyltransferase TobZ catalyzes an ancient enzymatic
            reaction
  JOURNAL   Angew Chem Int Ed Engl 51 (17), 4046-4052 (2012)
   PUBMED   22383337
REFERENCE   2  (residues 1 to 539)
  AUTHORS   Jabbouri,S., Fellay,R., Talmont,F., Kamalaprija,P., Burger,U.,
            Relic,B., Prome,J.C. and Broughton,W.J.
  TITLE     Involvement of nodS in N-methylation and nodU in 6-O-carbamoylation
            of Rhizobium sp. NGR234 nod factors
  JOURNAL   J Biol Chem 270 (39), 22968-22973 (1995)
   PUBMED   7559434
REFERENCE   3  (residues 1 to 539)
  AUTHORS   Coque,J.J., Perez-Llarena,F.J., Enguita,F.J., Fuente,J.L.,
            Martin,J.F. and Liras,P.
  TITLE     Characterization of the cmcH genes of Nocardia lactamdurans and
            Streptomyces clavuligerus encoding a functional
            3'-hydroxymethylcephem O-carbamoyltransferase for cephamycin
            biosynthesis
  JOURNAL   Gene 162 (1), 21-27 (1995)
   PUBMED   7557411
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028171.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16861.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..539
                     /product="carbamoyltransferase C-terminal
                     domain-containing protein"
                     /calculated_mol_wt=60520
     Region          2..320
                     /region_name="ASKHA_NBD_CmcH_N"
                     /note="N-terminal nucleotide-binding domain (NBD) of
                     3'-hydroxymethylcephem-O-carbamoyltransferase (CmcH) and
                     similar proteins; cd24102"
                     /db_xref="CDD:466952"
     Region          356..515
                     /region_name="Carbam_trans_C"
                     /note="Carbamoyltransferase C-terminus; pfam16861"
                     /db_xref="CDD:435610"
ORIGIN      
        1 mkilsfnpgh dgaftyledg hlitsieaek hsryrhspls ipdvfsvlge lkevpdvlcr
       61 ggwwpsdthl seqrfhagyh gvknrdiivd qqrflgktvk yfssshersh llcafgmsnl
      121 pkgtpcyall wegvigsfyk idaalnitkl advmpepghr yallyaladp tfnkstaefs
      181 rfsdagklma lasfskrska sdeeekiiaf lmqnclhltp kecealkycq hynigvedqe
      241 frnfagifsd rifdrfyqya esnltrgvpl licggcglnc dwntkwretn ffseifvppv
      301 andsgsaigt aidaqfhftg npkinwnvys glefaaddaf daslfdvhet nytmiadmla
      361 nnlivgwvng kyeigpralg nrsilaspfh ektrvrlnei kqreqfrpia pvcleedaks
      421 wfgciypspf mlytqlvstn alaavthvnr tarlqtvssl tnshlhellt afkvrtgygv
      481 lcntslnfkg rgfinnitdl saytiehnld gfvigrrgym lkssknyqay laitnqvas
//
LOCUS       WP_235165826             523 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-isopropylmalate synthase regulatory domain-containing protein
            [Dyadobacter chenhuakuii].
ACCESSION   WP_235165826
VERSION     WP_235165826.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 523)
  AUTHORS   Koon,N., Squire,C.J. and Baker,E.N.
  TITLE     Crystal structure of LeuA from Mycobacterium tuberculosis, a key
            enzyme in leucine biosynthesis
  JOURNAL   Proc Natl Acad Sci U S A 101 (22), 8295-8300 (2004)
   PUBMED   15159544
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020091.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08502.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..523
                     /product="alpha-isopropylmalate synthase regulatory
                     domain-containing protein"
                     /GO_function="GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=58057
     Region          9..289
                     /region_name="DRE_TIM_CMS"
                     /note="Leptospira interrogans citramalate synthase (CMS)
                     and related proteins, N-terminal catalytic TIM barrel
                     domain; cd07945"
                     /db_xref="CDD:163683"
     Site            order(14..15,18,46,81,142,144,175,177,205,207)
                     /site_type="active"
                     /db_xref="CDD:163683"
     Site            order(14..15,46)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:163683"
     Site            order(205,207,241)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:163683"
     Region          370..503
                     /region_name="LeuA_dimer"
                     /note="LeuA allosteric (dimerisation) domain; smart00917"
                     /db_xref="CDD:214910"
ORIGIN      
        1 mnsryieimd ttlrdgeqts gvsfsasekl tiaqillqev kvdrieiasa rvsegefqav
       61 rkitewaran gfldkievlt fvdgdasinw mlesgarvmn lltkgslnhl khqlkkspae
      121 hfedirkvie laenqgidcn vyledwsngm rdspeyvfqs ldflvtqpvk rillpdtlgi
      181 ltpsesytfv ksivdrypds hfefhahndy dlsvanvmea lragahglhl tvngmgertg
      241 naplastiav indlmpefkt svnerslytv sklvetfsgv ripsnkpivg esvftqtagi
      301 hadgdkknnl yfsklmperf grqrlyalgk tsgkanienn lrdlgislsd sdlkkvtqri
      361 ielgdrkeav tpedlpyiis dilasnaiee kvvivnyvlt hsknlkpsat lqirfedeif
      421 eenaqgdgqy dafmnalkki ycrkgislpm ltdyavripp ggktdalcet iitweingkd
      481 vktrgldsdq tvsaimatqk mlnligipan peligeiplv sai
//
LOCUS       WP_235165846             333 aa            linear   BCT 02-MAR-2025
DEFINITION  1-acyl-sn-glycerol-3-phosphate acyltransferase [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235165846
VERSION     WP_235165846.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 333)
  AUTHORS   Neuwald,A.F.
  TITLE     Barth syndrome may be due to an acyltransferase deficiency
  JOURNAL   Curr Biol 7 (8), R465-R466 (1997)
   PUBMED   9259571
REFERENCE   2  (residues 1 to 333)
  AUTHORS   Bione,S., D'Adamo,P., Maestrini,E., Gedeon,A.K., Bolhuis,P.A. and
            Toniolo,D.
  TITLE     A novel X-linked gene, G4.5. is responsible for Barth syndrome
  JOURNAL   Nat Genet 12 (4), 385-389 (1996)
   PUBMED   8630491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013702.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01553.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..333
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /GO_function="GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=37821
     Region          16..215
                     /region_name="LPLAT"
                     /note="Lysophospholipid acyltransferases (LPLATs) of
                     glycerophospholipid biosynthesis; cl17185"
                     /db_xref="CDD:473073"
     Site            order(49,52,55,71..74,129..131)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153254"
ORIGIN      
        1 mqvnftiyil ffyfsrflvr lalpiylkkl cvkgfeklhk gpvllasnhs gsffdavvig
       61 simtqpiftl trgdvfkkka aafwlrqikl ipvfrgsegr qyvknhditv kegydamkgg
      121 gaviifsegv cvnewnlrpl gkgtarmayq twygddplkn mgvvptgvny ehfrgpgkrv
      181 slrfgeaili hdiktdpqey erwlrefnei lerkmsaevw sipadiskae rtqrlnalfg
      241 dcplppggna iqkaigwfgr aihrplyhff erktakltar svfydsvlfg llmylyptiv
      301 vllsliagli fgwamglalf filpilawfa ary
//
LOCUS       WP_235165856             174 aa            linear   BCT 02-MAR-2025
DEFINITION  Ail/Lom family outer membrane beta-barrel protein, partial
            [Escherichia coli].
ACCESSION   WP_235165856
VERSION     WP_235165856.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 174)
  AUTHORS   Miller,V.L., Beer,K.B., Heusipp,G., Young,B.M. and Wachtel,M.R.
  TITLE     Identification of regions of Ail required for the invasion and
            serum resistance phenotypes
  JOURNAL   Mol Microbiol 41 (5), 1053-1062 (2001)
   PUBMED   11555286
REFERENCE   2  (residues 1 to 174)
  AUTHORS   Barondess,J.J. and Beckwith,J.
  TITLE     A bacterial virulence determinant encoded by lysogenic coliphage
            lambda
  JOURNAL   Nature 346 (6287), 871-874 (1990)
   PUBMED   2144037
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06316.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>174
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /GO_component="GO:0044384 - host outer membrane [Evidence
                     IEA]"
     Region          1..174
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mrkvcaails aaiclavsga pawasehqst lsagylhart napgsdnlng invkyryeft
       61 dtlglitsfs yanaedeqkt hysdtrwhed svrnrwfsvm agpsvrvnew fsayamagva
      121 ysrvstfsgd ylrvtdnkgk thdvltgsdd grhsnmslaw gagvqfnpte svai
//
LOCUS       WP_235165870              80 aa            linear   BCT 02-MAR-2025
DEFINITION  Ail/Lom family outer membrane beta-barrel protein, partial
            [Escherichia coli].
ACCESSION   WP_235165870
VERSION     WP_235165870.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 80)
  AUTHORS   Miller,V.L., Beer,K.B., Heusipp,G., Young,B.M. and Wachtel,M.R.
  TITLE     Identification of regions of Ail required for the invasion and
            serum resistance phenotypes
  JOURNAL   Mol Microbiol 41 (5), 1053-1062 (2001)
   PUBMED   11555286
REFERENCE   2  (residues 1 to 80)
  AUTHORS   Barondess,J.J. and Beckwith,J.
  TITLE     A bacterial virulence determinant encoded by lysogenic coliphage
            lambda
  JOURNAL   Nature 346 (6287), 871-874 (1990)
   PUBMED   2144037
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06316.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>80
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /GO_component="GO:0044384 - host outer membrane [Evidence
                     IEA]"
     Region          <1..>80
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 tlglvtsfsy agdknrqlth ysdtrwheds vrnrwfsvma gpsvrvnewf sayamagvay
       61 srvstfsgdy lrvtdnkgkt
//
LOCUS       WP_235165874             963 aa            linear   BCT 02-MAR-2025
DEFINITION  putative Ig domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235165874
VERSION     WP_235165874.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 963)
  AUTHORS   Bentley,S.D., Maiwald,M., Murphy,L.D., Pallen,M.J., Yeats,C.A.,
            Dover,L.G., Norbertczak,H.T., Besra,G.S., Quail,M.A., Harris,D.E.,
            von Herbay,A., Goble,A., Rutter,S., Squares,R., Squares,S.,
            Barrell,B.G., Parkhill,J. and Relman,D.A.
  TITLE     Sequencing and analysis of the genome of the Whipple's disease
            bacterium Tropheryma whipplei
  JOURNAL   Lancet 361 (9358), 637-644 (2003)
   PUBMED   12606174
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017183.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05345.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..963
                     /product="putative Ig domain-containing protein"
                     /calculated_mol_wt=108343
     Region          65..>119
                     /region_name="GH113-like"
                     /note="Glycoside hydrolase family 113 beta-mannosidase and
                     similar proteins; cl16298"
                     /db_xref="CDD:449734"
     Region          490..575
                     /region_name="CA_like"
                     /note="Cadherin repeat-like domain; cl46864"
                     /db_xref="CDD:481204"
     Site            order(497..498,541,572,574..575)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206636"
     Region          583..664
                     /region_name="CADG"
                     /note="Dystroglycan-type cadherin-like domains;
                     smart00736"
                     /db_xref="CDD:214795"
     Region          688..759
                     /region_name="CADG"
                     /note="Dystroglycan-type cadherin-like domains;
                     smart00736"
                     /db_xref="CDD:214795"
     Region          883..960
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     cl46851"
                     /db_xref="CDD:481191"
ORIGIN      
        1 mhhstygskl ltklffvvla wtisfqtlya qtspgttead nqrylalmll nvldkdekgp
       61 eldlirsaha yglnavylti pwdkiyytsp tdkplwdkfd qqiktatdlg mkvalrihlg
      121 rhstrikgfw epsdshmsst gkpvisgyqd tsfgfdndai sakaqafvke tvtrykylqt
      181 nkqllfvsit ttgtqegeyp gsliengkes pavydysrsm itgfreflis hykklqrlny
      241 lwginhknfe evlppatpwe psesfrqrag kdwyiyrhlv lkrfteqmit avksvdpnvk
      301 fvsdygsvfd rissvrgtlg frslneksng ikinddlath dhrwsvdiik stapanfiia
      361 nelfintvfd nnahlrqine nfahganvva vvasvqstms raepflrqaa qtwlsqpmkp
      421 ivytdsvsyr lsaaveksgp mnvvydewrk rayadpnnpk pvyiglnedi lapeywddas
      481 nyppyvfkpv pmqiiavnkd fayklpidtf sdvdgtvvrm evgtlpswlk fengqlrgrp
      541 atlgdyriqv kgiddeggvt eafltvrvdt renankpptv dasfsnqtia vnepfslpin
      601 dgafedadge vtkieaselp gwlkfsngvl tgtppslgef rislkayddl nafvetyfti
      661 kvvekqflna ppyaagslpv kygqlnmpfn yilpteifgd pdgyissitl qnrpswlnfa
      721 lntfsgtptv egeyrliira ydnagayvev pfiliveipk frfelvqggs kvdqrvirkl
      781 tgddvlahsd lpsslniyah gnfdydkvdf sltgpynrks qtknfpfaly enasgfapyi
      841 grytltvtat kedsaivtns iqfsisygds initkdledw rffpnpvesv fnvklpagld
      901 andisyelit vsgkkidfpk efvtvsddla nidlsrlyis sgiyvvrlhs ngtvlkqfki
      961 fkk
//
LOCUS       WP_235165903             486 aa            linear   BCT 02-MAR-2025
DEFINITION  amino acid permease [Dyadobacter chenhuakuii].
ACCESSION   WP_235165903
VERSION     WP_235165903.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..486
                     /product="amino acid permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=52436
     Region          25..473
                     /region_name="2A0306"
                     /note="amino acid transporter; TIGR00909"
                     /db_xref="CDD:129987"
ORIGIN      
        1 manqlwakkp iekllqestg eanqlkrsls stslvalgig aiigaglfsl tgiaaaehsg
       61 pavtisfila avgcgfaglc yaefasmipi agsaytysya tmgefvawii gwdlvleyal
      121 gaatvsvsws rylleflskf dihlptqlvc spfevvklsd gtiidngivn lpaifivcml
      181 slllirgteg saflnnmlvv lkvavvlvfi algwshidpq nyvpyipent gnyenfgwtg
      241 iatgaavvff afigfdavst aaqeaknpqk gmpigilgsl vvctilyvlf ahvmtglvky
      301 tefandakpa atafaktgyd slqtaliiai lagytsvmlv mllgqsrvfy smskdgllpr
      361 ffsdvhskfa tpwktnlffm gfvsifaglv pvsdlghmvs igtlfafclv cvgvwmlrvk
      421 rpdlkrsfkt plvpfvpimg ivvclylmys lpveswyrla vwlalglavy fgygkknski
      481 gregni
//
LOCUS       WP_235165933             952 aa            linear   BCT 02-MAR-2025
DEFINITION  putative LPS assembly protein LptD [Dyadobacter chenhuakuii].
ACCESSION   WP_235165933
VERSION     WP_235165933.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040057.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19838.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..952
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..952
                     /product="putative LPS assembly protein LptD"
                     /calculated_mol_wt=105139
     Region          244..742
                     /region_name="LptD_2"
                     /note="LptD protein; pfam19838"
                     /db_xref="CDD:466203"
ORIGIN      
        1 maaflifstv acvqqrtkrt gknqgkpnvt tsakqtadsl lavkkqagid ttgagknaas
       61 vngaiaggdt sltnkglads tavdslsnqd dlqntvkyts edstitdavl kqvhlygnae
      121 vtygtinlka syirlnwitn evyavgtpdp adstskktig dpifqdgpet yntkeirynf
      181 ktkkaliqgi vtqegdgnir gekvkkdaeg nfyirhsmyt tcnlthphyy inapkikmvn
      241 kkqvisgpfn lvisdvplpi alpfgffpfp kkkengtsgi lfptygeepn grgfylregg
      301 yyfaiseyin asvtgqiyst gswglgvast ysrryqyngn falrfnknks sdevdrdlgr
      361 gqtndfsiiw shaprprgns qfsanvnvss nsynqlqefe tnkyisnvas ssvqynrtfg
      421 qfmraaaslr vnqnfgqidp adgrkkngkt nvstdfsfgv nqiapfalkg grgrwyesfr
      481 lgldfsgnya ltnsltaidt sssslgfsii nnvdptrank tkvvefnlnn lpqmlkdaqf
      541 tgryslpisl pnfkvlrfvn vtpslslqge vftkqyaysv eknqvridtl rqagteysyn
      601 fgagvntrfy gtffvkgkrl eairhtvips lsftytpdft gdafgfyqkv niknrgldre
      661 yslsrfrgvg tgvsngqass vvsfslnnsf emklktksdt aaqqfekvsl ldnlslggny
      721 nlladslnls nitvnanari gknlnlnfnm nldpyayean prvlsnqvgt rvnkyavtqg
      781 qglanlqnlg ftlgtsfapk ssdktkpvvp pangnptvte eqrefiaqnp elyvdfnipw
      841 nvslnynfgl tkpglsraql iqavqvtgdl slsknfkvsv ntgfdftafe ptitsltlyr
      901 dlhcwdmsfs wtpfagsasr vsnynftlkv kssilqdlkv trrrsfydrs ay
//
LOCUS       WP_235166012             319 aa            linear   BCT 02-MAR-2025
DEFINITION  type IV secretion system DNA-binding domain-containing protein,
            partial [Escherichia coli].
ACCESSION   WP_235166012
VERSION     WP_235166012.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 319)
  AUTHORS   Gomis-Ruth,F.X., Moncalian,G., de la Cruz,F. and Coll,M.
  TITLE     Conjugative plasmid protein TrwB, an integral membrane type IV
            secretion system coupling protein. Detailed structural features and
            mapping of the active site cleft
  JOURNAL   J Biol Chem 277 (9), 7556-7566 (2002)
   PUBMED   11748238
REFERENCE   2  (residues 1 to 319)
  AUTHORS   Gomis-Ruth,F.X., Moncalian,G., Perez-Luque,R., Gonzalez,A.,
            Cabezon,E., de la Cruz,F. and Coll,M.
  TITLE     The bacterial conjugation protein TrwB resembles ring helicases and
            F1-ATPase
  JOURNAL   Nature 409 (6820), 637-641 (2001)
   PUBMED   11214325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021897.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10412.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>319
                     /product="type IV secretion system DNA-binding
                     domain-containing protein"
     Region          <1..319
                     /region_name="PRK13700"
                     /note="conjugal transfer protein TraD; Provisional"
                     /db_xref="CDD:184256"
ORIGIN      
        1 tkedpfwqgs grtifaeaay lmrndpnrsy sklvdtllsi kieklrtflr nspaanlvee
       61 kiektaisir avltnyvkai rylqgiehng esftirdwmr gvredqkngw lfissnadth
      121 aslkpvismw lsiairglla mgenrnrrvw ffcdelptlh klpdlveilp earkfggcyv
      181 fgiqsyaqle diygekaaat lfdvmntraf frspshkiae faageigeke hlkaseqysy
      241 gadpvrdgvs tgkdmerqtl vsysdiqslp dltcyvtlpg pypavklslk yqtrpkvape
      301 fiprdinpem enrlsavla
//
LOCUS       WP_235166013             309 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235166013
VERSION     WP_235166013.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024554.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13155.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..309
                     /product="toprim domain-containing protein"
                     /calculated_mol_wt=35013
     Region          8..>146
                     /region_name="DnaG"
                     /note="DNA primase (bacterial type) [Replication,
                     recombination and repair]; COG0358"
                     /db_xref="CDD:440127"
     Region          198..285
                     /region_name="Toprim_2"
                     /note="Toprim-like; pfam13155"
                     /db_xref="CDD:463793"
ORIGIN      
        1 mtceqarens ivellqncni hphyvrgqdh wylsplrdek tpsfkvnakl nlyydhgsgq
       61 ggdiidlgrq lfqcdtkall qklgsehllf hpqqsverna yidrnvtpet kqsaiqitst
      121 kdldsnvais qylqnrgidl siareyckev yyqvgdksyy aagfenrsgg yelrsshfkg
      181 ssspkdithi nsghksvcvl egfmdflsll tlrkhmpvqs dflvlnsvsl adrsldilkd
      241 yrtafiypdr deagkklmek yqdaglncvd ssgiyhnhkd lnellmasks pekqikkqqi
      301 fkksgglhl
//
LOCUS       WP_235166041             214 aa            linear   BCT 02-MAR-2025
DEFINITION  fimbrial protein, partial [Escherichia coli].
ACCESSION   WP_235166041
VERSION     WP_235166041.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012635.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00419.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..214
                     /product="fimbrial protein"
                     /GO_component="GO:0009289 - pilus [Evidence IEA]"
                     /GO_process="GO:0007155 - cell adhesion [Evidence IEA]"
     Region          <13..214
                     /region_name="Fimbrial"
                     /note="Fimbrial protein; cl01416"
                     /db_xref="CDD:445401"
ORIGIN      
        1 ehktlsisws hypqnlpfgv mdsrlifrlk virpfinmve iprqvmftvy vtstpydplv
       61 tpvytisfgg rvevpqncel nagqivefdf gdigaslfsa agpgnrpagv mpqtksiavk
      121 ctnvaaqayl tmrleasavs gqamvsdnqd lgfivadqnd tpitpndlns vipfrldaaa
      181 aanvtlrawp isitgqkpte gpfsalgylr vdyq
//
LOCUS       WP_235166081             530 aa            linear   BCT 02-MAR-2025
DEFINITION  M28 family peptidase [Dyadobacter chenhuakuii].
ACCESSION   WP_235166081
VERSION     WP_235166081.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016289.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04389.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..530
                     /product="M28 family peptidase"
                     /calculated_mol_wt=58551
     Region          130..256
                     /region_name="PA"
                     /note="Protease-associated (PA) domain. The PA domain is
                     an insert domain in a diverse fraction of proteases. The
                     significance of the PA domain to many of the proteins in
                     which it is inserted is undetermined. It may be a
                     protein-protein interaction domain. At...; cl28883"
                     /db_xref="CDD:333703"
     Site            216..218
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:240126"
     Region          286..524
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mnknllagml lsistltfaq ddaakyaesi tpddlkkhlv iiasdslegr dtgspgqkka
       61 aeyvssyykq ygltpaataa dgsksylqky nlhkrswgev yvkagskkye fnkefylngi
      121 lnvpqetsse vilvgygidd paytdynnld ikgkavvmfe gepksadgky lvsgtgektk
      181 wsgpvswqak arvaldrgat yvfivndktg ddldkeirqr avmarrfsap tlkpvveapn
      241 slaafavpas iaaqilntst skllkekasi dksgkplskq msgnvavkae rvsetieten
      301 vaafmegsdk kdevlvisah ldhigisdng einngadddg sgtvsllela eafskakaeg
      361 kgprrsilfl nvtgeekglf gseyysenpl fplkntiadl nidmigrvdk ahendhkyvy
      421 ligsdklssk lhaiseeank kyinynldyt fndpkdpnrf yyrsdhynfa kmgvpvifyf
      481 tgvhedyhkp gddvekilfd kqapivklvf htawelvnre erievdsnke
//
LOCUS       WP_235166080              73 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF927 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235166080
VERSION     WP_235166080.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 73)
  AUTHORS   Mir-Sanchis,I., Roman,C.A., Misiura,A., Pigli,Y.Z., Boyle-Vavra,S.
            and Rice,P.A.
  TITLE     Staphylococcal SCCmec elements encode an active MCM-like helicase
            and thus may be replicative
  JOURNAL   Nat Struct Mol Biol 23 (10), 891-898 (2016)
   PUBMED   27571176
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017826.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06048.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>73
                     /product="DUF927 domain-containing protein"
     Region          <2..>73
                     /region_name="COG5519"
                     /note="Predicted ATPase domain of Cch-like helicases,
                     DUF927 family [General function prediction only]"
                     /db_xref="CDD:444270"
ORIGIN      
        1 slagpllwll dvdsggfhfm gdsssgksvg alvacsvwge prnfkrnwna tstgleglat
       61 mrndtalild eig
//
LOCUS       WP_235166099             229 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase TerL endonuclease subunit, partial [Escherichia coli].
ACCESSION   WP_235166099
VERSION     WP_235166099.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Xu,R.G., Jenkins,H.T., Chechik,M., Blagova,E.V., Lopatina,A.,
            Klimuk,E., Minakhin,L., Severinov,K., Greive,S.J. and Antson,A.A.
  TITLE     Viral genome packaging terminase cleaves DNA using the canonical
            RuvC-like two-metal catalysis mechanism
  JOURNAL   Nucleic Acids Res 45 (6), 3580-3590 (2017)
   PUBMED   28100693
REFERENCE   2  (residues 1 to 229)
  AUTHORS   Hilbert,B.J., Hayes,J.A., Stone,N.P., Duffy,C.M., Sankaran,B. and
            Kelch,B.A.
  TITLE     Structure and mechanism of the ATPase that powers viral genome
            packaging
  JOURNAL   Proc Natl Acad Sci U S A 112 (29), E3792-E3799 (2015)
   PUBMED   26150523
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042863.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20441.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>229
                     /product="terminase TerL endonuclease subunit"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
     Region          <1..216
                     /region_name="YmfN"
                     /note="Phage terminase-like protein, large subunit,
                     contains N-terminal HTH domain [Mobilome: prophages,
                     transposons]; COG4626"
                     /db_xref="CDD:443665"
ORIGIN      
        1 tpwmgngawt ecagtfaead lygqecyagl dlsstsdiss vcyafpvgkk imlvsrhylp
       61 efqlqnpank nraiyrqwvk agwirttpgd cidydrirdd imadaenfni rlvgfdtwna
      121 thlrtqlqga gfevepfpqt ylrfspaaks fevfvnrkvi vhrgdpvlaw smsnvvmqsd
      181 ananikpnkk kssnkidpsv aalmafgtfq aeheefafdm sdshkerla
//
LOCUS       WP_235166109             228 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase large subunit domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_235166109
VERSION     WP_235166109.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 228)
  AUTHORS   Xu,R.G., Jenkins,H.T., Chechik,M., Blagova,E.V., Lopatina,A.,
            Klimuk,E., Minakhin,L., Severinov,K., Greive,S.J. and Antson,A.A.
  TITLE     Viral genome packaging terminase cleaves DNA using the canonical
            RuvC-like two-metal catalysis mechanism
  JOURNAL   Nucleic Acids Res 45 (6), 3580-3590 (2017)
   PUBMED   28100693
REFERENCE   2  (residues 1 to 228)
  AUTHORS   Hilbert,B.J., Hayes,J.A., Stone,N.P., Duffy,C.M., Sankaran,B. and
            Kelch,B.A.
  TITLE     Structure and mechanism of the ATPase that powers viral genome
            packaging
  JOURNAL   Proc Natl Acad Sci U S A 112 (29), E3792-E3799 (2015)
   PUBMED   26150523
REFERENCE   3  (residues 1 to 228)
  AUTHORS   Schouler,C., Ehrlich,S.D. and Chopin,M.C.
  TITLE     Sequence and organization of the lactococcal prolate-headed bIL67
            phage genome
  JOURNAL   Microbiology (Reading) 140 (Pt 11), 3061-3069 (1994)
   PUBMED   7812447
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015321.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03354.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>228
                     /product="terminase large subunit domain-containing
                     protein"
     Region          1..>228
                     /region_name="YmfN"
                     /note="Phage terminase-like protein, large subunit,
                     contains N-terminal HTH domain [Mobilome: prophages,
                     transposons]; COG4626"
                     /db_xref="CDD:443665"
ORIGIN      
        1 prknakstva ailanwflvm engqqdiyta avsrdqariv fddarqmcll srplrkrvni
       61 qahkvihpkt nsllkplaak aatiegtnps laivdeyhlh pdngvysale lgmgarpegl
      121 lfaittsgsn vvsackqhyd yccqildgee vnesmfvliy elddesevdd pamwikanpn
      181 idvsvdrekl astiqkargi psqwvemltk rfniwcqgat pwmgngaw
//
LOCUS       WP_235166112             422 aa            linear   BCT 02-MAR-2025
DEFINITION  CDP-glycerol glycerophosphotransferase family protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235166112
VERSION     WP_235166112.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 422)
  AUTHORS   Fitzgerald,S.N. and Foster,T.J.
  TITLE     Molecular analysis of the tagF gene, encoding
            CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase of
            Staphylococcus epidermidis ATCC 14990
  JOURNAL   J Bacteriol 182 (4), 1046-1052 (2000)
   PUBMED   10648531
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016357.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04464.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..422
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0047355 - CDP-glycerol
                     glycerophosphotransferase activity [Evidence IEA]"
                     /calculated_mol_wt=48972
     Region          <163..388
                     /region_name="Glyphos_transf"
                     /note="CDP-Glycerol:Poly(glycerophosphate)
                     glycerophosphotransferase; cl42225"
                     /db_xref="CDD:478041"
ORIGIN      
        1 mstmirtael aeinkhfnlq lklihvdfpr esawlcylrk iekalfayhf niitqtikyq
       61 neekwkglli rkllwilsll hitktalcal rrviitltsl sirlkpllay hfkgvisssp
      121 ldlrenqvvn flgrhhvksl amiiswdnlt skglinadhn ctlvwndfmk neflhfysif
      181 klkrpkvvat giprfdcyfq hrseayyera rrlfnvksgk fiiliatsan rhfpnqleii
      241 edvlqfarge nnvhvimrch pgddanayah iareqfvtlw hpknlpatnh elfynwfpel
      301 dflhslaqml ricdvcvqfa stmkldaaac kkpvisiayd gkmplpyhqs vqrlydyahq
      361 vplnalqidk vvtnrqqlyn alktslqdig hqeklaaiap fthftesesv nftakiiaew
      421 ld
//
LOCUS       WP_235166180             126 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail sheath subtilisin-like domain-containing protein,
            partial [Escherichia coli].
ACCESSION   WP_235166180
VERSION     WP_235166180.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 126)
  AUTHORS   Xue,Q. and Egan,J.B.
  TITLE     Tail sheath and tail tube genes of the temperate coliphage 186
  JOURNAL   Virology 212 (1), 218-221 (1995)
   PUBMED   7676633
REFERENCE   2  (residues 1 to 126)
  AUTHORS   Temple,L.M., Forsburg,S.L., Calendar,R. and Christie,G.E.
  TITLE     Nucleotide sequence of the genes encoding the major tail sheath and
            tail tube proteins of bacteriophage P2
  JOURNAL   Virology 181 (1), 353-358 (1991)
   PUBMED   1825255
REFERENCE   3  (residues 1 to 126)
  AUTHORS   Arisaka,F., Ishimoto,L., Kassavetis,G., Kumazaki,T. and Ishii,S.
  TITLE     Nucleotide sequence of the tail tube structural gene of
            bacteriophage T4
  JOURNAL   J Virol 62 (3), 882-886 (1988)
   PUBMED   2963141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04984.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>126
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
     Region          <1..126
                     /region_name="gpL"
                     /note="Mu-like prophage tail sheath protein gpL [Mobilome:
                     prophages, transposons]; COG4386"
                     /db_xref="CDD:443512"
ORIGIN      
        1 gtfgetrndw liscigtnls phpawmwaas ygataayhla idparplqtl vltgilppar
       61 nvrwdmpern lllhdgiath mvdagdnvci ereitmyrvn qygdadvsyl dvqspatlgr
      121 iryiik
//
LOCUS       WP_235166139             110 aa            linear   BCT 02-MAR-2025
DEFINITION  phage protein GemA/Gp16 family protein, partial [Escherichia coli].
ACCESSION   WP_235166139
VERSION     WP_235166139.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 110)
  AUTHORS   Abbes,C., Joseleau-Petit,D., Liebart,J.C., D'Ari,R. and Sezonov,G.
  TITLE     The GemA protein of phage Mu and the GyrB gyrase subunit of
            Escherichia coli: the search for targets and interactions leading
            to the reversion of Mu-induced mutations
  JOURNAL   Biochimie 83 (2), 261-267 (2001)
   PUBMED   11278077
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018011.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06252.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..110
                     /product="phage protein GemA/Gp16 family protein"
     Region          <4..67
                     /region_name="GemA"
                     /note="Bacteriophage Mu, GemA protein; cl01815"
                     /db_xref="CDD:470357"
ORIGIN      
        1 prekiykiwq qmfldgfvsd isdaaldkyv erltarrngg qgvstlawch geslqvvlet
       61 lkqwhmrcir eafarhgvpl pvsetgrelr gydaltsaya rarnsgrivl
//
LOCUS       WP_235166189              97 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA circularization N-terminal domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_235166189
VERSION     WP_235166189.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018818.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07157.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>97
                     /product="DNA circularization N-terminal domain-containing
                     protein"
     Region          20..>97
                     /region_name="COG4228"
                     /note="Mu-like prophage DNA circulation protein [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443372"
ORIGIN      
        1 mdfpslpsls slfssssgtt wrdnlydasf rgvpfsvesd egsfgrrvqv heypnrdkpy
       61 tedlgratrr ltinaylvgd dyaeqrdrli taietag
//
LOCUS       WP_235166190             323 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Dyadobacter chenhuakuii].
ACCESSION   WP_235166190
VERSION     WP_235166190.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024118.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12706.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..323
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=35646
     Region          20..322
                     /region_name="PDE1"
                     /note="cAMP phosphodiesterase [Signal transduction
                     mechanisms]; COG5212"
                     /db_xref="CDD:444071"
ORIGIN      
        1 mptnfltktm rilafllltc fvsvcsaqns frvvplgvrg ggddgnlsay mvapvnsnay
       61 vcldagtvtn giskaltnka fsvaadvvlr kyikaylish phldhvsgmv insvedtakn
      121 vygteyciet lkshyfnwks wpnltnegas palkkysykm lgedqevdie qtemsvkifk
      181 lshsnpyest aflirkgeky vlyfgdtgpd eieksdkmqq vwkavaplvk akqlagifle
      241 vsytnkqpdr qlyghltpkw lmkelnvlse isgagslkgl nviithmkpt adnesqikae
      301 lasdnalgln lifpeqgkaf elk
//
LOCUS       WP_235166194             527 aa            linear   BCT 02-MAR-2025
DEFINITION  SusD/RagB family nutrient-binding outer membrane lipoprotein
            [Dyadobacter chenhuakuii].
ACCESSION   WP_235166194
VERSION     WP_235166194.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 527)
  AUTHORS   Koropatkin,N., Martens,E.C., Gordon,J.I. and Smith,T.J.
  TITLE     Structure of a SusD homologue, BT1043, involved in mucin O-glycan
            utilization in a prominent human gut symbiont
  JOURNAL   Biochemistry 48 (7), 1532-1542 (2009)
   PUBMED   19191477
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024181.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12771.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..527
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /calculated_mol_wt=57782
     Region          32..499
                     /region_name="SusD-like_2"
                     /note="Starch-binding associating with outer membrane;
                     pfam12771"
                     /db_xref="CDD:463695"
ORIGIN      
        1 mknlkkyiky glavalvtgc dtkqlhdlni npqalnevnl nfiftsaelg iasngttgdn
       61 ryidwrtnig mfsyaiqhla nsgggiapgd kytvnaetna apfeftyndq lkniaeilkq
      121 sgpggfaegk ykntreasri lrafsfarlt dlygnipyse ankgiegiff pkydtqdviy
      181 adllkeldea taalstsnpd egfkaadfiy ngdiarwkkw gyslmlrlam risnvdaaka
      241 atyvtkaaag gvftsnadnv wvkmadgpse wvnqngisra fdagdggqpt ylsatlvnfl
      301 kganpavatd ddprlmiisg gigsgtvitd pvkqkgmpng ydlamlekle nkkpidvstt
      361 ysrinskmlq dsdpyqimny gevefllaea ierkigtgia gtakshyeag vkasmqmytp
      421 fdasltvsda aaakylttyp ygvtkpalem igeqmwvnkf fnwweawsdw rrtgfpkltp
      481 tnypgnvtgg tipvrlrypt nevagnpnyq tgatlpddft tkvwwdk
//
LOCUS       WP_235166212              24 aa            linear   BCT 02-MAR-2025
DEFINITION  Hok/Gef family protein, partial [Escherichia coli].
ACCESSION   WP_235166212
VERSION     WP_235166212.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013968.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01848.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..24
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..24
                     /product="Hok/Gef family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
     Region          <1..20
                     /region_name="HOK_GEF"
                     /note="Hok/gef family; cl27487"
                     /db_xref="CDD:452751"
ORIGIN      
        1 dlcevrirtg qtevavfvdy esek
//
LOCUS       WP_235166279             572 aa            linear   BCT 02-MAR-2025
DEFINITION  SusD/RagB family nutrient-binding outer membrane lipoprotein
            [Dyadobacter chenhuakuii].
ACCESSION   WP_235166279
VERSION     WP_235166279.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 572)
  AUTHORS   Koropatkin,N., Martens,E.C., Gordon,J.I. and Smith,T.J.
  TITLE     Structure of a SusD homologue, BT1043, involved in mucin O-glycan
            utilization in a prominent human gut symbiont
  JOURNAL   Biochemistry 48 (7), 1532-1542 (2009)
   PUBMED   19191477
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024181.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12771.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..572
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /calculated_mol_wt=64071
     Region          38..525
                     /region_name="SusD-like_2"
                     /note="Starch-binding associating with outer membrane;
                     pfam12771"
                     /db_xref="CDD:463695"
ORIGIN      
        1 mkilkyipgl vfmlsllmvt sckesltein enpngvdpnr anpnlimptv mtgvanqyvk
       61 lgygriagvi qhtqedawkd gfndynwnee ddewkswygf lrnnnllykr avetkvkfhe
      121 avaltmrafi fgtisdlwgd apytqalkgd egtmlpvfds qeviykgiie dlkaasaifa
      181 ssgderdapa ydvyyngsaq kwqkfantll lryymrissk lpdiakpgie avyasgiyfk
      241 dasddavmdf igtdsnnswp nataydvses nwrrrrpast linnlvtned prlkvwfqpv
      301 hvrwvadptl argmdefire dgkiltgvks lteqelrvki aaghkytrhf npntykpsrp
      361 eqfngpintg eyvgvppgmi dptyynenpt tgqqvqnqha sqlsytyqgn kggilkarla
      421 saaeasfila eaaqkgwaag saaahynngi kqslqtwgva dkydtfikqk gvayngtlaq
      481 imeqkwvssw taategwfdy rrtglpalip gvaptsralp lrfiysnnel nnngesvksa
      541 iekleetkfs gprkknsqws kpwlvqgtgk pw
//
LOCUS       WP_235166405             140 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Dyadobacter chenhuakuii].
ACCESSION   WP_235166405
VERSION     WP_235166405.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 140)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..140
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=15920
     Region          21..131
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(107..110,112)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 mdkngpiiii eddpddkfvl eevfcelgyp nprmyftdgq saldylytsk dlpfiiisdi
       61 nlpqlnglel rrkvqtdael slkcipyvyf ttainqqvvi daystsaqgf fvkpgeydev
      121 katikvmidy wkrcaapnnf
//
LOCUS       WP_235165648             186 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235165648
VERSION     WP_235165648.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Moore,T.C. and Escalante-Semerena,J.C.
  TITLE     The EutQ and EutP proteins are novel acetate kinases involved in
            ethanolamine catabolism: physiological implications for the
            function of the ethanolamine metabolosome in Salmonella enterica
  JOURNAL   Mol Microbiol 99 (3), 497-511 (2016)
   PUBMED   26448059
REFERENCE   2  (residues 1 to 186)
  AUTHORS   Pitts,A.C., Tuck,L.R., Faulds-Pain,A., Lewis,R.J. and
            Marles-Wright,J.
  TITLE     Structural insight into the Clostridium difficile ethanolamine
            utilisation microcompartment
  JOURNAL   PLoS One 7 (10), e48360 (2012)
   PUBMED   23144756
REFERENCE   3  (residues 1 to 186)
  AUTHORS   Serventi,F., Ramazzina,I., Lamberto,I., Puggioni,V., Gatti,R. and
            Percudani,R.
  TITLE     Chemical basis of nitrogen recovery through the ureide pathway:
            formation and hydrolysis of S-ureidoglycine in plants and bacteria
  JOURNAL   ACS Chem Biol 5 (2), 203-214 (2010)
   PUBMED   20038185
REFERENCE   4  (residues 1 to 186)
  AUTHORS   Werner,A.K., Romeis,T. and Witte,C.P.
  TITLE     Ureide catabolism in Arabidopsis thaliana and Escherichia coli
  JOURNAL   Nat Chem Biol 6 (1), 19-21 (2010)
   PUBMED   19935661
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017690.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05899.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>186
                     /product="cupin domain-containing protein"
     Region          1..>176
                     /region_name="PRK11171"
                     /note="(S)-ureidoglycine aminohydrolase"
                     /db_xref="CDD:183011"
ORIGIN      
        1 mgylnnvtgy rddllanrai vkhgnfallt pdglvkniip gfencdatil stpklgasfv
       61 dylvtlhqng gnqqgfggeg ietflyvisg nitakaegkt falseggyly cppgslmtfv
      121 naqaedsqif lykrryvpve ghapwlvsgn aselerihye gmddvilldf lpkelgkvri
      181 sgeill
//
LOCUS       WP_235166522             263 aa            linear   BCT 02-MAR-2025
DEFINITION  replication protein [Pseudomonas putida].
ACCESSION   WP_235166522
VERSION     WP_235166522.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas putida
  ORGANISM  Pseudomonas putida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 263)
  AUTHORS   Zylicz,M., Gorska,I., Taylor,K. and Georgopoulos,C.
  TITLE     Bacteriophage lambda replication proteins: formation of a mixed
            oligomer and binding to the origin of lambda DNA
  JOURNAL   Mol Gen Genet 196 (3), 401-406 (1984)
   PUBMED   6239082
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016381.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04492.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Pseudomonas putida"
                     /db_xref="taxon:303"
     Protein         1..263
                     /product="replication protein"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /calculated_mol_wt=29200
     Region          7..101
                     /region_name="Phage_rep_O"
                     /note="Bacteriophage replication protein O; cl04545"
                     /db_xref="CDD:471049"
ORIGIN      
        1 msnvttiqpk cgftrmdndl yealiaaels grelrvalai hrqtagynld saciaasyia
       61 qmsgirredv sraisellrq gvihreggsr spigfapvge wkidkknthp nkpkeapqcg
      121 vsntsnvafl phnkdrntnt tpdgvvgdae rqpaqtktrr qkpamdscpy qaivdlfhna
      181 lpelpgvail ndarkralqa rwresdvhrd lgfwedyffq vstsaflmgk vegrygtkpf
      241 ratfdwliap snfvkvvegn yha
//
LOCUS       WP_235166536             189 aa            linear   BCT 02-MAR-2025
DEFINITION  fimbrial protein [Escherichia coli].
ACCESSION   WP_235166536
VERSION     WP_235166536.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012635.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00419.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..189
                     /product="fimbrial protein"
                     /GO_component="GO:0009289 - pilus [Evidence IEA]"
                     /GO_process="GO:0007155 - cell adhesion [Evidence IEA]"
                     /calculated_mol_wt=20206
     Region          10..189
                     /region_name="Fimbrial"
                     /note="Fimbrial protein; cl01416"
                     /db_xref="CDD:445401"
ORIGIN      
        1 mikitphkia ilmgillsps vfatdinvef tatvkattcn itltgnnvtn dgnnnytlri
       61 pkmgldkian kttesqadfk lvasgcssgi swidttltgn asssspklii pqsgdssstt
      121 snigmgfkkr ttddatflkp nsaekirwst demqpdkcle mtvalretda gqgvpgnfra
      181 latfnfiyq
//
LOCUS       WP_235166591             491 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail sheath subtilisin-like domain-containing protein
            [Escherichia coli].
ACCESSION   WP_235166591
VERSION     WP_235166591.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 491)
  AUTHORS   Xue,Q. and Egan,J.B.
  TITLE     Tail sheath and tail tube genes of the temperate coliphage 186
  JOURNAL   Virology 212 (1), 218-221 (1995)
   PUBMED   7676633
REFERENCE   2  (residues 1 to 491)
  AUTHORS   Temple,L.M., Forsburg,S.L., Calendar,R. and Christie,G.E.
  TITLE     Nucleotide sequence of the genes encoding the major tail sheath and
            tail tube proteins of bacteriophage P2
  JOURNAL   Virology 181 (1), 353-358 (1991)
   PUBMED   1825255
REFERENCE   3  (residues 1 to 491)
  AUTHORS   Arisaka,F., Ishimoto,L., Kassavetis,G., Kumazaki,T. and Ishii,S.
  TITLE     Nucleotide sequence of the tail tube structural gene of
            bacteriophage T4
  JOURNAL   J Virol 62 (3), 882-886 (1988)
   PUBMED   2963141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04984.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..491
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
                     /calculated_mol_wt=52970
     Region          1..491
                     /region_name="gpL"
                     /note="Mu-like prophage tail sheath protein gpL [Mobilome:
                     prophages, transposons]; COG4386"
                     /db_xref="CDD:443512"
ORIGIN      
        1 mslgsipddi rvplvwidid nsqaldgasa qsrkilvmgh avsagsadal sltritsdsq
       61 adqlygkgsm laemlkmlrr antytetwam pvaapegaaa katltvlgta teagtvalli
      121 ngvsvqvsvs agatkeniak aiadavtkkp atqvtaavke datdtveltv nwhgvtgnga
      181 dvrlnyytge afpagvkvta taftggtgtp emadavaaig pewftdiiap ftdtkslntl
      241 rdellnrwgp lkmmeaqlwt afrgthgetg tfgenrndwl iscigtnlsp hpawmwaasy
      301 gataayhlai dparplqtlv ltgilpparn vrwdmpernl llhdgiathm vdagdnvcie
      361 reitmyrvnq ygdadvsyld vqspatlgri ryiiknrftn ryprhkladd dvldsldagq
      421 pvmtpklcta elldicqtel ipaglvenfs dykdtlqvtr dssdknrlnf ichpnlvnql
      481 rvlagliqfk l
//
LOCUS       WP_235166629              62 aa            linear   BCT 02-MAR-2025
DEFINITION  TA system toxin CbtA family protein, partial [Escherichia coli].
ACCESSION   WP_235166629
VERSION     WP_235166629.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 62)
  AUTHORS   Tan,Q., Awano,N. and Inouye,M.
  TITLE     YeeV is an Escherichia coli toxin that inhibits cell division by
            targeting the cytoskeleton proteins, FtsZ and MreB
  JOURNAL   Mol Microbiol 79 (1), 109-118 (2011)
   PUBMED   21166897
REFERENCE   2  (residues 1 to 62)
  AUTHORS   Brown,J.M. and Shaw,K.J.
  TITLE     A novel family of Escherichia coli toxin-antitoxin gene pairs
  JOURNAL   J Bacteriol 185 (22), 6600-6608 (2003)
   PUBMED   14594833
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018465.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06755.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..62
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..62
                     /product="TA system toxin CbtA family protein"
     Region          <1..46
                     /region_name="CbtA_toxin"
                     /note="CbtA_toxin of type IV toxin-antitoxin system;
                     pfam06755"
                     /db_xref="CDD:369065"
ORIGIN      
        1 vnflvekyal vrtdqpgfsa gassqlinsi dilrarratg lmtrhnyrtv nnitlgkype
       61 ak
//
LOCUS       WP_235166634             181 aa            linear   BCT 02-MAR-2025
DEFINITION  fimbria/pilus outer membrane usher protein, partial [Escherichia
            coli].
ACCESSION   WP_235166634
VERSION     WP_235166634.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 181)
  AUTHORS   Huang,Y., Smith,B.S., Chen,L.X., Baxter,R.H. and Deisenhofer,J.
  TITLE     Insights into pilus assembly and secretion from the structure and
            functional characterization of usher PapC
  JOURNAL   Proc Natl Acad Sci U S A 106 (18), 7403-7407 (2009)
   PUBMED   19380723
REFERENCE   2  (residues 1 to 181)
  AUTHORS   Remaut,H., Tang,C., Henderson,N.S., Pinkner,J.S., Wang,T.,
            Hultgren,S.J., Thanassi,D.G., Waksman,G. and Li,H.
  TITLE     Fiber formation across the bacterial outer membrane by the
            chaperone/usher pathway
  JOURNAL   Cell 133 (4), 640-652 (2008)
   PUBMED   18485872
REFERENCE   3  (residues 1 to 181)
  AUTHORS   Jacob-Dubuisson,F., Striker,R. and Hultgren,S.J.
  TITLE     Chaperone-assisted self-assembly of pili independent of cellular
            energy
  JOURNAL   J Biol Chem 269 (17), 12447-12455 (1994)
   PUBMED   7909802
REFERENCE   4  (residues 1 to 181)
  AUTHORS   Schifferli,D.M. and Alrutz,M.A.
  TITLE     Permissive linker insertion sites in the outer membrane protein of
            987P fimbriae of Escherichia coli
  JOURNAL   J Bacteriol 176 (4), 1099-1110 (1994)
   PUBMED   7906265
REFERENCE   5  (residues 1 to 181)
  AUTHORS   Van Rosmalen,M. and Saier,M.H. Jr.
  TITLE     Structural and evolutionary relationships between two families of
            bacterial extracytoplasmic chaperone proteins which function
            cooperatively in fimbrial assembly
  JOURNAL   Res Microbiol 144 (7), 507-527 (1993)
   PUBMED   7906046
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012786.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00577.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..181
                     /product="fimbria/pilus outer membrane usher protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015473 - fimbrial usher porin activity
                     [Evidence IEA]"
                     /GO_process="GO:0009297 - pilus assembly [Evidence IEA]"
     Region          <9..181
                     /region_name="FimD"
                     /note="Outer membrane usher protein FimD/PapC [Cell
                     motility, Extracellular structures]; COG3188"
                     /db_xref="CDD:442421"
ORIGIN      
        1 sreefprlfa pslgetialv kalgaaglei dnmrgaatdw rgytvktqln pydenrvais
       61 dnyfsksnie ldntvvtmvp trgavvkaef vthvgyrvlf rvlnangkpv pfgaiaaiqd
      121 asladsgivg drgelylsgl pekgqvtlsw genastkcif nyslstpese sglieqgvtc
      181 h
//
LOCUS       WP_235166692             166 aa            linear   BCT 02-MAR-2025
DEFINITION  ogr/Delta-like zinc finger family protein [Escherichia coli].
ACCESSION   WP_235166692
VERSION     WP_235166692.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 166)
  AUTHORS   Julien,B., Lefevre,P. and Calendar,R.
  TITLE     The two P2 Ogr-like domains of the delta protein from bacteriophage
            P4 are required for activity
  JOURNAL   Virology 230 (2), 292-299 (1997)
   PUBMED   9143285
REFERENCE   2  (residues 1 to 166)
  AUTHORS   Slettan,A., Gebhardt,K., Kristiansen,E., Birkeland,N.K. and
            Lindqvist,B.H.
  TITLE     Escherichia coli K-12 and B contain functional bacteriophage P2 ogr
            genes
  JOURNAL   J Bacteriol 174 (12), 4094-4100 (1992)
   PUBMED   1597424
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016487.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04606.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..166
                     /product="ogr/Delta-like zinc finger family protein"
                     /calculated_mol_wt=18827
     Region          1..>44
                     /region_name="Zn_ribbon_recom"
                     /note="Recombinase zinc beta ribbon domain; cl19592"
                     /db_xref="CDD:450334"
     Region          87..>135
                     /region_name="Zn_ribbon_recom"
                     /note="Recombinase zinc beta ribbon domain; cl19592"
                     /db_xref="CDD:450334"
ORIGIN      
        1 miycpscghv ahtrrahfmd dgtkimiaqc rniycsgtfe asesffsdck dsgmeyisgk
       61 qryrdsltsa sgsmkrpkrm lvtgyccrrc kglalsrtsr rlsqevterf yvctdpgcgl
      121 vfktlqtinr fivrpvtpde laeslhekqe lppvrlktqs yslrle
//
LOCUS       WP_235166707             182 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter, partial [Bacteria].
ACCESSION   WP_235166707
VERSION     WP_235166707.1
KEYWORDS    RefSeq.
SOURCE      Bacteria (bacteria)
  ORGANISM  Bacteria
            Unclassified.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Bacteria"
                     /db_xref="taxon:2"
     Protein         <1..182
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <1..174
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mvpymmktiy hvnvatigns vifpgtmsvi vfgyfggflv drkgslfvfi lgslsisisf
       61 ltiaffvefs mwlttfmfif vmgglsftkt viskivsssl seeevasgms llnftsflse
      121 gtgiaivggl lslqlinrkl vlefinyssg vysnilvama iliilccllt iivfkrsekq
      181 fe
//
LOCUS       WP_235166733              35 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: replication/maintenance protein RepL, partial
            [Bacteria].
ACCESSION   WP_235166733
VERSION     WP_235166733.1
KEYWORDS    RefSeq.
SOURCE      Bacteria (bacteria)
  ORGANISM  Bacteria
            Unclassified.
REFERENCE   1  (residues 1 to 35)
  AUTHORS   Hefford,M.A., Kobayashi,Y., Allard,S.E., Forster,R.J. and
            Teather,R.M.
  TITLE     Sequence analysis and characterization of pOM1, a small cryptic
            plasmid from Butyrivibrio fibrisolvens, and its use in construction
            of a new family of cloning vectors for Butyrivibrios
  JOURNAL   Appl Environ Microbiol 63 (5), 1701-1711 (1997)
   PUBMED   9143105
REFERENCE   2  (residues 1 to 35)
  AUTHORS   Lampson,B.C. and Parisi,J.T.
  TITLE     Nucleotide sequence of the constitutive
            macrolide-lincosamide-streptogramin B resistance plasmid pNE131
            from Staphylococcus epidermidis and homologies with Staphylococcus
            aureus plasmids pE194 and pSN2
  JOURNAL   J Bacteriol 167 (3), 888-892 (1986)
   PUBMED   3091582
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017542.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05732.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..35
                     /organism="Bacteria"
                     /db_xref="taxon:2"
     Protein         <1..35
                     /product="replication/maintenance protein RepL"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /GO_process="GO:0006276 - plasmid maintenance [Evidence
                     IEA]"
     Region          <1..24
                     /region_name="HTH_ARSR"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; cl46857"
                     /db_xref="CDD:481197"
ORIGIN      
        1 ddqkqkylll efgnfeqean ekqenalsdy ysfkd
//
LOCUS       WP_235166746             229 aa            linear   BCT 02-MAR-2025
DEFINITION  bacteriophage antitermination protein Q [Enterobacter hormaechei].
ACCESSION   WP_235166746
VERSION     WP_235166746.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Goliger,J.A. and Roberts,J.W.
  TITLE     Bacteriophage 82 gene Q and Q protein. Sequence, overproduction,
            and activity as a transcription antiterminator in vitro
  JOURNAL   J Biol Chem 262 (24), 11721-11725 (1987)
   PUBMED   3624233
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018074.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06323.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..229
                     /product="bacteriophage antitermination protein Q"
                     /calculated_mol_wt=25563
     Region          5..220
                     /region_name="Phage_antiter_Q"
                     /note="Phage antitermination protein Q; pfam06323"
                     /db_xref="CDD:428887"
ORIGIN      
        1 mnsqqleyvr qqlivatadl sgatkgqlva faenaqftat arsrgrkkit dpvtgrkvnp
       61 dgpamsgsqs rakgssialv gpvefvtasw rravlsledh qkawllwnys enirfeyqva
      121 itqwawaefr eqlgakkvag ktmerlkkli wlaaqdvkae lagretyeyq alaslvgvtp
      181 knwsetftdr wvemrriflr ldggallqvt rsrsqqkatn ldsslakld
//
LOCUS       WP_235166786             164 aa            linear   BCT 02-MAR-2025
DEFINITION  T6SS effector amidase Tae4 family protein [Enterobacter
            hormaechei].
ACCESSION   WP_235166786
VERSION     WP_235166786.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 164)
  AUTHORS   Zhang,H., Zhang,H., Gao,Z.Q., Wang,W.J., Liu,G.F., Xu,J.H., Su,X.D.
            and Dong,Y.H.
  TITLE     Structure of the type VI effector-immunity complex (Tae4-Tai4)
            provides novel insights into the inhibition mechanism of the
            effector by its immunity protein
  JOURNAL   J Biol Chem 288 (8), 5928-5939 (2013)
   PUBMED   23288853
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025478.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14113.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..164
                     /product="T6SS effector amidase Tae4 family protein"
                     /calculated_mol_wt=18500
     Region          46..161
                     /region_name="Tae4"
                     /note="Type VI secretion system (T6SS), amidase effector
                     protein 4; pfam14113"
                     /db_xref="CDD:433727"
ORIGIN      
        1 mrplyeqlkr qhyssnhtra gfasgeqvfs eigydystii kqqpaykntc avrmslallk
       61 cnveftgrlp iktgpykgkt iepgakllad qlykshvfgk aeifkdreag arsmlgrkgv
      121 vffnkidgyg gghidliepl snnsficnsd cfpycqeiwf welk
//
LOCUS       WP_235166921              59 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GTP-binding protein, partial [Enterobacterales].
ACCESSION   WP_235166921
VERSION     WP_235166921.1
KEYWORDS    RefSeq.
SOURCE      Enterobacterales
  ORGANISM  Enterobacterales
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (residues 1 to 59)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..59
                     /organism="Enterobacterales"
                     /db_xref="taxon:91347"
     Protein         1..>59
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>59
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 mskekfersk phvnvgtigh vdhgkttlta aittvlakty ggsarafdqi dnapeekar
//
LOCUS       WP_235166939             256 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase domain-containing protein [Serratia
            fonticola].
ACCESSION   WP_235166939
VERSION     WP_235166939.1
KEYWORDS    RefSeq.
SOURCE      Serratia fonticola
  ORGANISM  Serratia fonticola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 256)
  AUTHORS   Xiong,Y. and Eickbush,T.H.
  TITLE     Origin and evolution of retroelements based upon their reverse
            transcriptase sequences
  JOURNAL   EMBO J 9 (10), 3353-3362 (1990)
   PUBMED   1698615
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00078.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Serratia fonticola"
                     /db_xref="taxon:47917"
     Protein         1..256
                     /product="reverse transcriptase domain-containing protein"
                     /calculated_mol_wt=30116
     Region          <54..>247
                     /region_name="YkfC"
                     /note="Retron-type reverse transcriptase [Mobilome:
                     prophages, transposons]; COG3344"
                     /db_xref="CDD:442573"
ORIGIN      
        1 mqwsahdalv lkwvamciea hlprprdchh lrghggvsgs tqqvssawrn gewryvyrtd
       61 irgyyrhilk pqvagqlqwh vhnrvcrdlc lqwlhysied ggeihtpekg icrgsalspl
      121 iggsllrhvd hyfggredlf yarymddfii ftqtrwhlrk aikrlheffd lggfeahpnk
      181 tqlgriengf dwlgvwyape gpwiapraie nyreriarly eqaryrklsk tetelrvrey
      241 earwstwakh llqnag
//
LOCUS       WP_235166946             235 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: type II secretion system F family protein [Serratia].
ACCESSION   WP_235166946
VERSION     WP_235166946.1
KEYWORDS    RefSeq.
SOURCE      Serratia
  ORGANISM  Serratia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae.
REFERENCE   1  (residues 1 to 235)
  AUTHORS   Peabody,C.R., Chung,Y.J., Yen,M.R., Vidal-Ingigliardi,D.,
            Pugsley,A.P. and Saier,M.H.
  TITLE     Type II protein secretion and its relationship to bacterial type IV
            pili and archaeal flagella
  JOURNAL   Microbiology (Reading) 149 (Pt 11), 3051-3072 (2003)
   PUBMED   14600218
REFERENCE   2  (residues 1 to 235)
  AUTHORS   Py,B., Loiseau,L. and Barras,F.
  TITLE     An inner membrane platform in the type II secretion machinery of
            Gram-negative bacteria
  JOURNAL   EMBO Rep 2 (3), 244-248 (2001)
   PUBMED   11266368
REFERENCE   3  (residues 1 to 235)
  AUTHORS   Stathopoulos,C., Hendrixson,D.R., Thanassi,D.G., Hultgren,S.J., St
            Geme,J.W. 3rd and Curtiss,R. 3rd.
  TITLE     Secretion of virulence determinants by the general secretory
            pathway in gram-negative pathogens: an evolving story
  JOURNAL   Microbes Infect 2 (9), 1061-1072 (2000)
   PUBMED   10967286
REFERENCE   4  (residues 1 to 235)
  AUTHORS   Salmond,G.P. and Reeves,P.J.
  TITLE     Membrane traffic wardens and protein secretion in gram-negative
            bacteria
  JOURNAL   Trends Biochem Sci 18 (1), 7-12 (1993)
   PUBMED   8438237
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11449670
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Serratia"
                     /db_xref="taxon:613"
     Protein         1..235
                     /product="type II secretion system F family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /calculated_mol_wt=26092
     Region          72..230
                     /region_name="TadC"
                     /note="Flp pilus assembly protein TadC [Extracellular
                     structures]; COG2064"
                     /db_xref="CDD:441667"
ORIGIN      
        1 mttidhrlli innnlwlsrl dlldkkvslk lrlcgavggg alllkftgaw nlsmqelami
       61 llivlviiiv tpgilvnmgv ktrmkllida ipyyidlvav cvqsgmtves alrfvcdnfh
      121 eidpnlaslm livvkkadvs glqsgleely rsmeetemrm fcstlqqsvf ygtslyenll
      181 eisreirelq lldteekvgs lsakmsipli vfimfpivvl iaapgilrim ksavf
//
LOCUS       WP_235166749             161 aa            linear   BCT 02-MAR-2025
DEFINITION  phage baseplate assembly protein domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_235166749
VERSION     WP_235166749.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 161)
  AUTHORS   Harada,K., Yamashita,E., Nakagawa,A., Miyafusa,T., Tsumoto,K.,
            Ueno,T., Toyama,Y. and Takeda,S.
  TITLE     Crystal structure of the C-terminal domain of Mu phage central
            spike and functions of bound calcium ion
  JOURNAL   Biochim Biophys Acta 1834 (1), 284-291 (2013)
   PUBMED   22922659
REFERENCE   2  (residues 1 to 161)
  AUTHORS   Suzuki,H., Yamada,S., Toyama,Y. and Takeda,S.
  TITLE     The C-terminal domain is sufficient for host-binding activity of
            the Mu phage tail-spike protein
  JOURNAL   Biochim Biophys Acta 1804 (9), 1738-1742 (2010)
   PUBMED   20478417
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018585.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06890.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..161
                     /product="phage baseplate assembly protein
                     domain-containing protein"
     Region          2..156
                     /region_name="gp45"
                     /note="Mu-like prophage protein gp45 [Mobilome: prophages,
                     transposons]; COG4384"
                     /db_xref="CDD:443510"
ORIGIN      
        1 avdsarkcqs vglkmiagdq kqhvehlepy gftsvaqnga egvalfpagd rshgvvvvva
       61 drryrlkglk rgevalyddq gqsvvltrsg ivvngggkpi ifqnapkarf empvestadi
      121 tdncdsggls mqqmrqtyna hkhtengdgg gitdtpdqpm g
//
LOCUS       WP_235167021             864 aa            linear   BCT 02-MAR-2025
DEFINITION  CS1-pili formation C-terminal domain-containing protein
            [Enterobacter hormaechei].
ACCESSION   WP_235167021
VERSION     WP_235167021.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 864)
  AUTHORS   Froehlich,B.J., Karakashian,A., Melsen,L.R., Wakefield,J.C. and
            Scott,J.R.
  TITLE     CooC and CooD are required for assembly of CS1 pili
  JOURNAL   Mol Microbiol 12 (3), 387-401 (1994)
   PUBMED   7915003
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027306.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15976.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..864
                     /product="CS1-pili formation C-terminal domain-containing
                     protein"
                     /calculated_mol_wt=95507
     Region          286..353
                     /region_name="TcfC"
                     /note="E-set like domain; pfam16967"
                     /db_xref="CDD:435681"
     Region          <510..826
                     /region_name="FimD"
                     /note="Outer membrane usher protein FimD/PapC [Cell
                     motility, Extracellular structures]; COG3188"
                     /db_xref="CDD:442421"
     Region          749..840
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
ORIGIN      
        1 mvknklvlpv mmacasgtlp alahaasssv vianyrfpds lyalleqgik ipvylvntrp
       61 hsaqqgnheg taseyvrigd vtlfakdlkl glrdvqvqes dngirlskem rtllqsindk
      121 qfddqmripv stgsafeldq kkmrlllnls qsdygvnirp revdidapes ddlsgtfsyn
      181 lgayhtesgy gdswssgyln arnwismgvd hvlidgsgyv nesssdtqmn avmwerdyqg
      241 mryaagmlng wamqslasvs gisggevygv smgnqansrk rdntlsltpv vvyfptagea
      301 rirrdgqlig iqrfdvgnhe idtsslpygi ysievevvsg srtvsrsmyt vnkpfssnvs
      361 etlrwqmwgg mysrdksvvn ykkyakrine qdntyyydyd tkhkdtmslv gasfskrsgm
      421 vdwnastymm rehivselwa slnltgyfsv ntqtmaasdg tyranyganl slpwqigsvw
      481 ysheqlssgk fldiyeskgn twgasfslps fglpsagnls lmrqeddlyr ykryqldysq
      541 glyagrygta rlrvgmsrnk ydgyyeekdr yvmldfaipl gntvsvgvsh nrdtgtalnv
      601 sasrqfegdy lksatanvsk afnsrqdrsv sgggsvnfdt pwnsnilsvq sgmskgwnst
      661 ltsdgsvgws keaiaagkgt esagvivstg lksdealtlk lngraerikg dktwlslpay
      721 qaydlevmns etgtesyeig anarrhitvy pgntvvmkpq vkkivtlfgr lvdangapig
      781 amqiknhvgl trtendgrfv idvdknnpvl siatpddsvc evrldiesnr galwlgdisc
      841 dkgdfvwqea kgtqerddek dirs
//
LOCUS       WP_235167035             245 aa            linear   BCT 02-MAR-2025
DEFINITION  capsule biosynthesis GfcC family protein [Enterobacter hormaechei].
ACCESSION   WP_235167035
VERSION     WP_235167035.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 245)
  AUTHORS   Sathiyamoorthy,K., Mills,E., Franzmann,T.M., Rosenshine,I. and
            Saper,M.A.
  TITLE     The crystal structure of Escherichia coli group 4 capsule protein
            GfcC reveals a domain organization resembling that of Wza
  JOURNAL   Biochemistry 50 (24), 5465-5476 (2011)
   PUBMED   21449614
REFERENCE   2  (residues 1 to 245)
  AUTHORS   Burroughs,A.M., Balaji,S., Iyer,L.M. and Aravind,L.
  TITLE     A novel superfamily containing the beta-grasp fold involved in
            binding diverse soluble ligands
  JOURNAL   Biol Direct 2, 4 (2007)
   PUBMED   17250770
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 245)
  AUTHORS   Peleg,A., Shifrin,Y., Ilan,O., Nadler-Yona,C., Nov,S., Koby,S.,
            Baruch,K., Altuvia,S., Elgrably-Weiss,M., Abe,C.M., Knutton,S.,
            Saper,M.A. and Rosenshine,I.
  TITLE     Identification of an Escherichia coli operon required for formation
            of the O-antigen capsule
  JOURNAL   J Bacteriol 187 (15), 5259-5266 (2005)
   PUBMED   16030220
REFERENCE   4  (residues 1 to 245)
  AUTHORS   Whitfield,C. and Roberts,I.S.
  TITLE     Structure, assembly and regulation of expression of capsules in
            Escherichia coli
  JOURNAL   Mol Microbiol 31 (5), 1307-1319 (1999)
   PUBMED   10200953
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018010.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06251.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..245
                     /product="capsule biosynthesis GfcC family protein"
                     /calculated_mol_wt=26744
     Region          26..142
                     /region_name="Caps_syn_GfcC_N"
                     /note="Capsule biosynthesis GfcC, N-terminal; pfam20616"
                     /db_xref="CDD:466765"
     Region          155..244
                     /region_name="Caps_syn_GfcC_C"
                     /note="Capsule biosynthesis GfcC C-terminal; pfam06251"
                     /db_xref="CDD:461862"
ORIGIN      
        1 mnrlrkwlpg vglslfslsa lcasvvtvhq pgktwsaepa dtlsrlvtqp qlnnvwwqga
       61 viatpsatlr aqqtqqqvla slsawqnrad deriatirav aaqirslriv grqfvsldpd
      121 avrtdargdr slegrydlwl spaprtvtlm gavvtpgkra wrpgasirdy lqgqlrlaga
      181 drnnvtvidp dgstvvapva ywnarhieae pgavlwvgfd pravlddftg lneqivallt
      241 rripd
//
LOCUS       WP_235167094             105 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein, partial [Serratia fonticola].
ACCESSION   WP_235167094
VERSION     WP_235167094.1
KEYWORDS    RefSeq.
SOURCE      Serratia fonticola
  ORGANISM  Serratia fonticola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 105)
  AUTHORS   Wang,J., Hofnung,M. and Charbit,A.
  TITLE     The C-terminal portion of the tail fiber protein of bacteriophage
            lambda is responsible for binding to LamB, its receptor at the
            surface of Escherichia coli K-12
  JOURNAL   J Bacteriol 182 (2), 508-512 (2000)
   PUBMED   10629200
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024939.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13550.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Serratia fonticola"
                     /db_xref="taxon:47917"
     Protein         1..>105
                     /product="phage tail protein"
     Region          <1..>105
                     /region_name="COG4733"
                     /note="Phage-related protein, tail protein J [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443767"
ORIGIN      
        1 myiqsqqday tvlrdiaaif rgitywgndq lfayadmprd vdfvysranv iggefayasg
       61 syknrytsal vkwgdpanhy adaveaaydn elvkrygvnq teita
//
LOCUS       WP_235167041             586 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase domain-containing protein [Serratia
            fonticola].
ACCESSION   WP_235167041
VERSION     WP_235167041.1
KEYWORDS    RefSeq.
SOURCE      Serratia fonticola
  ORGANISM  Serratia fonticola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 586)
  AUTHORS   Xiong,Y. and Eickbush,T.H.
  TITLE     Origin and evolution of retroelements based upon their reverse
            transcriptase sequences
  JOURNAL   EMBO J 9 (10), 3353-3362 (1990)
   PUBMED   1698615
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00078.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Serratia fonticola"
                     /db_xref="taxon:47917"
     Protein         1..586
                     /product="reverse transcriptase domain-containing protein"
                     /calculated_mol_wt=64973
     Region          <55..252
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            order(69..74,122..123,153,155..156,202..203)
                     /site_type="active"
                     /db_xref="CDD:238185"
     Site            order(69..74,122,155)
                     /site_type="other"
                     /note="NTP binding site [chemical binding]"
                     /db_xref="CDD:238185"
     Site            123
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:238185"
ORIGIN      
        1 mnvvgnqrqv mwsaedalvl kwvalnvmpl lplhpkcehv rghgggrtsl trmqqailre
       61 gyswvcrtdi qgyyasinkk vllgqlarhv khpvlinllt qyihycvedg gefytpergi
      121 argcalsplm galhlwaldh hfsqqeniyy arymddvvim tktrwslrrh vkalnghfek
      181 lsfhqhpdkt yvgqlakgfd wmgaqlgrag lqgiapralt nhrtkvrrly eqtrslpvae
      241 rarrvsnylr rweiwrrclv gslcmwcgtl laetvqmshd vrtydlrgtg pssreyraek
      301 rsnstitiyt phtknvsmgs pkylqlafrl edwatpgdyc ditvnasigg nlsatnatik
      361 sapgngfcvt dsnplvsmva ndgieilfkl gqnrdrfyvk rfktiseptv lvhdvyspas
      421 agykvlindn lgnppltqad inllpapvsc tatlsskhva fgdvswsdag dpvttevttv
      481 crskdgvdar lkvssalpns prglsllgtt qpdwyvhaai grptcspdeg ldlrpggaah
      541 gffvspgkps aqsivwnlcy lpdgrnrsrs qgggletsal vdvtwd
//
LOCUS       WP_235167137             144 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3828 domain-containing protein [Enterobacter hormaechei].
ACCESSION   WP_235167137
VERSION     WP_235167137.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024287.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12883.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..144
                     /product="DUF3828 domain-containing protein"
                     /calculated_mol_wt=16530
ORIGIN      
        1 mnkliflvlf staalgaedf qipmqrdlef nrwyvkqvnn drypiqqgne idefvtastm
       61 kklrhaadpr yadaefyead ffmksqyige dwaenvaids ydsdpvcvnv nitfgkktqh
      121 tvidcmined gvwkiqsvaa rdnn
//
LOCUS       WP_235167233             411 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Enterobacter hormaechei].
ACCESSION   WP_235167233
VERSION     WP_235167233.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..411
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44594
     Region          20..405
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(28..29,32..33,36,67,121..122,124..126,129,147,
                     150..151,154,228,231..232,235..237,240,265,269,321..322,
                     326,330,346,349..350,353..354,357)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mvstesseka itqhrllvpr lslmmllqff iwgswsvtlg lvmtrhnmsl ligdafsagp
       61 iasilspfvl gmlvdrffas qkvmavmhla gavilwfvpg aliaengall igllfgytlc
      121 ymptlaltnn iafhslanvd ktfpvvrvfg tigwiaagif igvtgvassv tifqvaavss
      181 vllavysltl phtpapakgl pvkvrdlfca dafallktrh ffvfsvcaml isvplgtyya
      241 ytasyladag iadvstamsf gqmseivfml vipllfrrlg vkvmlligml awfvryamfa
      301 lgvseegril lylgillhgv cydfffvvgf iytdrvagek vkgqaqsmiv mftygigmll
      361 gsqisgalyn rlvagqtvpq awvtfwwipa vaaaaialif lltfkydddk a
//
LOCUS       WP_235167381             111 aa            linear   BCT 02-MAR-2025
DEFINITION  capsid cement protein [Enterobacter hormaechei].
ACCESSION   WP_235167381
VERSION     WP_235167381.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 111)
  AUTHORS   Yang,F., Jiang,Y.L., Zhang,J.T., Zhu,J., Du,K., Yu,R.C., Wei,Z.L.,
            Kong,W.W., Cui,N., Li,W.F., Chen,Y., Li,Q. and Zhou,C.Z.
  TITLE     Fine structure and assembly pattern of a minimal myophage Pam3
  JOURNAL   Proc Natl Acad Sci U S A 120 (4), e2213727120 (2023)
   PUBMED   36656854
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021473.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09956.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..111
                     /product="capsid cement protein"
                     /calculated_mol_wt=11127
     Region          2..110
                     /region_name="DUF2190"
                     /note="Uncharacterized conserved protein (DUF2190);
                     cl02289"
                     /db_xref="CDD:470520"
ORIGIN      
        1 maknyqqdgk tldfqntgat dihtgdavls galvgvahdd ipaglwgvlh ttgvfvlpka
       61 aeavtvgqkl yladgkltae ageaaapnpl agtawaeaaa dadsvpvrlg y
//
LOCUS       WP_235167388             474 aa            linear   BCT 02-MAR-2025
DEFINITION  TIM-barrel domain-containing protein [Enterobacter hormaechei].
ACCESSION   WP_235167388
VERSION     WP_235167388.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 474)
  AUTHORS   Henrissat,B.
  TITLE     Glycosidase families
  JOURNAL   Biochem Soc Trans 26 (2), 153-156 (1998)
   PUBMED   9649738
REFERENCE   2  (residues 1 to 474)
  AUTHORS   Henrissat,B.
  TITLE     A classification of glycosyl hydrolases based on amino acid
            sequence similarities
  JOURNAL   Biochem J 280 (Pt 2) (Pt 2), 309-316 (1991)
   PUBMED   1747104
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01055.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..474
                     /product="TIM-barrel domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=54135
     Region          27..>386
                     /region_name="PRK10658"
                     /note="putative alpha-glucosidase; Provisional"
                     /db_xref="CDD:236731"
     Region          236..>461
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
     Site            order(281..282,387,389..390,442,454,457)
                     /site_type="active"
                     /db_xref="CDD:269891"
     Site            order(389,457)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:269891"
ORIGIN      
        1 mseliqhsns iewrferqil riepwgensl rvratcspaf edalqallpa apcqaeiiae
       61 aesltlrngn itatlnlkgq lafynqrgel lleemwrqrs tvgigaseks qdkyvsalkl
      121 dgrefkplmg gkyqltvrfe srpderiygm gqyqqpwldl kgctlelaqr nsqasvpfmq
      181 sslgygllwn npaigeasfa knqtewrarv tgemdywita adtvaditrq yvkatgtppa
      241 apafisglwq cklryrtqqe vlevareyrr rnlplsvmvi dffhwpnqgt wcfdpvdwpd
      301 pegmvdelre mgialmvsvw ptvearsply plmkakgwlv ssergvqvnl dfmgnttffd
      361 athpearkfv wdtvkknyyd mgiklfwlde aepeyraydf dnyryhagpv levgnryprd
      421 faqgfydglq angetdivnl vrcawaaasd svcwrgrvms tphsmlfain sprd
//
LOCUS       WP_235166616              58 aa            linear   BCT 02-MAR-2025
DEFINITION  type II toxin-antitoxin system MqsR family toxin, partial
            [Escherichia coli].
ACCESSION   WP_235166616
VERSION     WP_235166616.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 58)
  AUTHORS   Brown,B.L., Grigoriu,S., Kim,Y., Arruda,J.M., Davenport,A.,
            Wood,T.K., Peti,W. and Page,R.
  TITLE     Three dimensional structure of the MqsR:MqsA complex: a novel TA
            pair comprised of a toxin homologous to RelE and an antitoxin with
            unique properties
  JOURNAL   PLoS Pathog 5 (12), e1000706 (2009)
   PUBMED   20041169
REFERENCE   2  (residues 1 to 58)
  AUTHORS   Shah,D., Zhang,Z., Khodursky,A., Kaldalu,N., Kurg,K. and Lewis,K.
  TITLE     Persisters: a distinct physiological state of E. coli
  JOURNAL   BMC Microbiol 6, 53 (2006)
   PUBMED   16768798
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 58)
  AUTHORS   Gonzalez Barrios,A.F., Zuo,R., Hashimoto,Y., Yang,L., Bentley,W.E.
            and Wood,T.K.
  TITLE     Autoinducer 2 controls biofilm formation in Escherichia coli
            through a novel motility quorum-sensing regulator (MqsR, B3022)
  JOURNAL   J Bacteriol 188 (1), 305-316 (2006)
   PUBMED   16352847
REFERENCE   4  (residues 1 to 58)
  AUTHORS   Ren,D., Bedzyk,L.A., Thomas,S.M., Ye,R.W. and Wood,T.K.
  TITLE     Gene expression in Escherichia coli biofilms
  JOURNAL   Appl Microbiol Biotechnol 64 (4), 515-524 (2004)
   PUBMED   14727089
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027059.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15723.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..58
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>58
                     /product="type II toxin-antitoxin system MqsR family
                     toxin"
                     /GO_process="GO:0009372 - quorum sensing [Evidence IEA]"
                     /GO_process="GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /GO_process="GO:0044010 - single-species biofilm formation
                     [Evidence IEA]"
     Region          2..>45
                     /region_name="MqsR"
                     /note="Motility quorum-sensing regulator (MqsR); cl18942"
                     /db_xref="CDD:450239"
ORIGIN      
        1 mekrtphtrl sqvkklvnag qvrttrsall nadelgldfd gmcnvgndsn llivfyvq
//
LOCUS       WP_235167422             791 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 N-terminal domain-containing protein
            [Enterobacter hormaechei].
ACCESSION   WP_235167422
VERSION     WP_235167422.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 791)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00933.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..791
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=85697
     Region          16..762
                     /region_name="PRK15098"
                     /note="beta-glucosidase BglX"
                     /db_xref="CDD:185053"
ORIGIN      
        1 mtaiykdagr pvhervadll armtpeekfa qmhaywlild ehgnhrersd lsdefagvse
       61 qaslnerlkl gvgqitrplg thivnaktgv caanrlqrmm meetrlgipa lfheeclvgl
      121 lckdatlfps slnygstwdp alvqraaeqi gkearsvgcq qglapvldvs rdvrwgrtee
      181 tfgedpwlvg vmatayvkgl qgdkrdllat lkhyvghsfs egarnhapvh lgfselndtf
      241 llpfemavkl anagsvmpay hdidnqpghs dhfllttvlr eqwgfdgiiv adyggvsllh
      301 qhhgishdpa esaalafnag ldvelpkddc arhlaeaver glismakvde ivarvlsekf
      361 rlglfekpya dedgidlqse atrqvareva tksitllenn gilplggkpr vavvgptadd
      421 plallsgysf pvhliisdmv eetsqvttpr aaleqylgas liryakgchi iekrmagapv
      481 fpgdsggkpi qqspvsqrmd lipdavsaak esdvviacvg dlaglfqsgt vgegsdtdsl
      541 nlpgvqqqll ealvatgkpv ivvmtggrpy nlqgleekva almmawapgq eggwaiadvl
      601 tgraepqgrl vvsvpknaga mpyyynhklk sggtpfafhf galypfgygl gwtqfrwgaa
      661 rlaesrvpid gevalsvdit ntgersgsev vqvyvrdkva tqvrplqelk afqrvtlspg
      721 etatltftlp vemfnftrrd gkrivepgef elqvgassad iravvnvqvs gktrvlagdw
      781 rmlsrcditl a
//
LOCUS       WP_235167475             563 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Enterobacter hormaechei].
ACCESSION   WP_235167475
VERSION     WP_235167475.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 563)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..563
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=59900
     Region          16..563
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(316..317,320..321,324,327..328,330..331,334,
                     337..338,341,344..345,348..349,352,355..356,358..359,363,
                     365..366,369,372..373,376..377,380,383,386..387,390,394,
                     397,404,408,411,414..415,418,421..422,425..426,428..429,
                     432..433,446..447,450,453..454,457,460..461,463..464,
                     467..468,471,474..475,478,481..482,484..485,488..489,
                     491..492,495,498..499,502)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            386..419
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 mdnttsmqaq hklsflhhir lvplfssilg giillfalss glagyfllqa dndqqdvtve
       61 iqvrtglsns snhlrtarin mihagaasri aemeamkqni aeaetrirqs qdgfaaymkr
      121 tirtpadeal dgdlkaryda yiagmqpmlk yakngmfeai inhenetarp lddaynavll
      181 kaikirtera naltaqahtr trlglmfmfg afglalalav itfvvlrrtv inplqraatr
      241 ieniakgdlt mpdeptgrse igrltrdlqt mqhalvttvg tvrqgaeeiy rgtseisagn
      301 tdlssrteqq aaaieqtaas meqltatvkq nadnahhask laedasgkas rggqmvsgvv
      361 ktmgnistss kkiseitavi nsiafqtnil alnaaveaar ageqgrgfav vasevrtlas
      421 rsanaakeie slinesvsli dqgsgevvaa gntmneivea vkrvtdimle iaaasdeqsr
      481 givqvsqais emdkvtqqna slveeasaaa asleeqgarl teavgafrln garagrapaa
      541 anaakpaplt paavvsgdnw etf
//
LOCUS       WP_235167520             294 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Enterobacter
            hormaechei].
ACCESSION   WP_235167520
VERSION     WP_235167520.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 294)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..294
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=32256
     Region          4..291
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(97,105,108..109,111..112,115,123,125,127,173,
                     207..208,227..228,234..235,237..238,256)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176106"
     Site            order(98,148,197..198,205)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:176106"
ORIGIN      
        1 mqfrlmrnfi vvaeelhmhr aaerlnmaqp alsqqiktle drlgvmlfsr anrrltltpa
       61 geaflskarv ailmtdqail darqtargeq gvlnlgcvss aifdsklpaa lrllhekwpa
      121 islsmmtgnv qtlytgvqnn qldvaiirap lpllpddlqs rpfttekavl alprqhslag
      181 saaltlasvk eekwialrdp egmgleqyfy dachsagiqp dvvqnatdvp tvislvsagf
      241 giamlpasak aicvqnvvfv dildrlrese ltlvchriir sevlkklmsi ldht
//
LOCUS       WP_235167557             149 aa            linear   BCT 02-MAR-2025
DEFINITION  DMT family transporter [Enterobacter hormaechei].
ACCESSION   WP_235167557
VERSION     WP_235167557.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 149)
  AUTHORS   Jack,D.L., Yang,N.M. and Saier,M.H. Jr.
  TITLE     The drug/metabolite transporter superfamily
  JOURNAL   Eur J Biochem 268 (13), 3620-3639 (2001)
   PUBMED   11432728
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10007109
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..149
                     /product="DMT family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=15521
     Region          1..148
                     /region_name="ydcZ"
                     /note="Uncharacterized membrane protein YdcZ, DUF606
                     family [Function unknown]; COG3238"
                     /db_xref="CDD:442470"
ORIGIN      
        1 mnqsltlafl vaagiglvvq ntlmvritqs sstiliamll nslvgivlfv smllvkngma
       61 gfnelastvr wwtlipgllg sffvfasisg yqnvgaatti avlvasqlig glvmdilksn
      121 gvplraqvgp vcgavmlvvg awlvarrqf
//
LOCUS       WP_235167633             146 aa            linear   BCT 02-MAR-2025
DEFINITION  DcrB-related protein [Enterobacter hormaechei].
ACCESSION   WP_235167633
VERSION     WP_235167633.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 146)
  AUTHORS   Samsonov,V.V., Samsonov,V.V. and Sineoky,S.P.
  TITLE     DcrA and dcrB Escherichia coli genes can control DNA injection by
            phages specific for BtuB and FhuA receptors
  JOURNAL   Res Microbiol 153 (10), 639-646 (2002)
   PUBMED   12558182
REFERENCE   2  (residues 1 to 146)
  AUTHORS   Likhacheva,N.A., Samsonov,V.V., Samsonov,V.V. and Sineoky,S.P.
  TITLE     Genetic control of the resistance to phage C1 of Escherichia coli
            K-12
  JOURNAL   J Bacteriol 178 (17), 5309-5315 (1996)
   PUBMED   8752353
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020366.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08786.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..146
                     /product="DcrB-related protein"
                     /calculated_mol_wt=16456
     Region          3..140
                     /region_name="COG5435"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:444186"
ORIGIN      
        1 mkytlqegsf tlfpaawqdn smniirddes glsvvvsrgv ipdgsdyeqe fhrqwevlrp
       61 qmgeiaqsef qhvkagpdgn isglevettf drngqrlwqk qlavqtpgkp vlmiftlsal
      121 kafteedear wsvlkqsltl ndnrnv
//
LOCUS       WP_235167711             308 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Enterobacter
            hormaechei].
ACCESSION   WP_235167711
VERSION     WP_235167711.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 308)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..308
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=34908
     Region          3..286
                     /region_name="PRK11139"
                     /note="DNA-binding transcriptional activator GcvA;
                     Provisional"
                     /db_xref="CDD:182990"
ORIGIN      
        1 mslpplyalr afevaarlns fskaaetlni tpgavsrhvr tlelwfdcel fkrqgprvev
       61 teagrvlagq lnesftsiew acrafrsenh llrlkapstl tmrwlldvlr sfrnnhakpq
      121 veiasvwmdi dtvdfnlepy dcaillgngr fgdttesqll fhewlipvct pslieparqr
      181 lpqcdlihps pdrrdwrrwl rrtglfpgld mssgmvfdtl eqgciaamng hgiaiadlhl
      241 tldalksgll glpfreaiat gdgyylvwpk nslkresiqh llawlqnhtp vvpaldilyl
      301 eydesrvy
//
LOCUS       WP_235167724             245 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF726 domain-containing protein [Enterobacter hormaechei].
ACCESSION   WP_235167724
VERSION     WP_235167724.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017121.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05277.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..245
                     /product="DUF726 domain-containing protein"
                     /calculated_mol_wt=27677
ORIGIN      
        1 mkkcpvllvv sgfltendis wfnrikagcg ldvryykwes anllsilssd iankwglytl
       61 fplrtsplls sisisfkarq awynatkaav nnreklahvi neiyvkekrn viimghslgt
      121 rlinntlpyi kndnilltis magatpitsy tenimkmayg skmghlniys ehdkvlntiy
      181 plvesvtpig vrevrfrpar iinwkwnvgh teyitsnrid slthwlnvtc adladpavel
      241 tdddi
//
LOCUS       WP_235167940             155 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6130 family protein [Enterobacter hormaechei].
ACCESSION   WP_235167940
VERSION     WP_235167940.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039665.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19625.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..155
                     /product="DUF6130 family protein"
                     /calculated_mol_wt=16447
     Region          16..154
                     /region_name="DUF6130"
                     /note="Family of unknown function (DUF6130); pfam19625"
                     /db_xref="CDD:437457"
ORIGIN      
        1 mirryfllpv faltsfagal aapldglsaa dvngpaavap qekpqppakl ivdpplagpl
       61 skgavftqyr venlriepvf gpdalkvtpr ighihvvvdd apwhwadtsg epvilvglpa
      121 gkhkvtiiva dpthkpidhk tveftvppha avhhf
//
LOCUS       WP_235168051             784 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Enterobacter
            hormaechei].
ACCESSION   WP_235168051
VERSION     WP_235168051.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..784
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..784
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=90730
     Region          <72..268
                     /region_name="AraC"
                     /note="AraC-type DNA-binding domain and AraC-containing
                     proteins [Transcription]; COG2207"
                     /db_xref="CDD:441809"
     Region          180..263
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
     Region          <466..769
                     /region_name="XynB"
                     /note="Beta-xylosidase [Carbohydrate transport and
                     metabolism]; COG3664"
                     /db_xref="CDD:442881"
ORIGIN      
        1 maqrgdefwi eiqdirhcve degdtltllw vlegraelnt dagrdtlean tlaiinrhrr
       61 wqftsetanv tlrvtlsgrw vvqlcndffa hdyavpaeag gvwpqcdalr dllrqllvvt
      121 lindphryrl eayrwlseil llltsrfqqp armlsrelss ahskriarvi erinasysrr
      181 itlaeiaase yvseawlsrl frkevgisfm qyithlrlek aadalrltnr plhqialeqg
      241 fastrmmsdr frrvhnmspg efrkarrqhp eaarirtdrr eqrypvavdk lfsllnepva
      301 rgwgaspliv hpqqeqrldl eqlnplsasl rrmrvvitlr elddllredv rqnleainqa
      361 ipiegidiae pflssrlfat gwddpqmagy acwynlhqlf twlakkqwtv llhtgvttrr
      421 dlltrflqqs vnhfapeita gwhfvmhwst qaseetreqv wlaqqkairt ylpqakfglw
      481 hrfapvsagv sddtlfssai lmqadflacs adanelldpa qlevtplsst enypilkvrq
      541 ilaalrlrkc slpvwllswn tltgntratn gwffrgallm qnllglseqv wlagfwlnsg
      601 lqgearannt idtsslalqy nhglprpvyw vlwlwqrlrg evlvndkrvl ltrhrngyql
      661 llrnvvvfnp llsseeafiq rfrqqyhlhl kgmrgkwrik chlfdqhnga lypllegvgs
      721 esgpdeemwr wiahkarptl svrderlydg wqlseslesn alvlyeftpl vpreaeteei
      781 hspr
//
LOCUS       WP_235168147             515 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Enterobacter hormaechei].
ACCESSION   WP_235168147
VERSION     WP_235168147.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 515)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..515
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=54946
     Region          3..515
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(300..301,304..305,308,311..312,314..315,318,
                     321..322,325,328..329,332..333,336,339..340,342..343,347,
                     349..350,353,356..357,360..361,364,367,370..371,374,378,
                     381,388,392,395,398..399,402,405..406,409..410,412..413,
                     416..417,430..431,434,437..438,441,444..445,447..448,
                     451..452,455,458..459,462,465..466,468..469,472..473,
                     475..476,479,482..483,486,489..490)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            370..403
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 mkmlrnftir fvmltilgif cvmwagvgly stwslsrvsd gndvdrllvr qmtvlsqgnd
       61 qyfrfvtrls ramevkaagg tpdlapaqqa ldnmskklae mkaispgpmd ekvsaqvist
      121 wqalldqgvt pqmaqakqat legyrqhann vtpplsrafg saaenfnnta akaldstrvv
      181 vdgltsmtrt viitativgl lillftdsyl vailvkpldr irqqfrqiaq gdlsqpiesl
      241 grncvgqlvp llsamqdslr eavstirsgs eniwrgatei ssgnndlssr teeqaaalee
      301 taasmeqlta tvklnaesar qasqladvas stasrggslv edvvttmsgi sdsskkiaei
      361 ttvinsiafq tnilalnaav eaarageqgr gfavvagevr nlasrsanaa keiegliads
      421 varveqgaql vndtgttmea ilrdvtevtv imkqiatase eqskgisqvg vaitqmdgvt
      481 qqnaslveqv saaaaalerq teelqrsvqk frlta
//
LOCUS       WP_235168215             548 aa            linear   BCT 02-MAR-2025
DEFINITION  dihydroxyacetone kinase subunit DhaK [Enterobacter hormaechei].
ACCESSION   WP_235168215
VERSION     WP_235168215.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014753.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02733.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..548
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /EC_number="2.7.1.121"
                     /GO_function="GO:0004371 - glycerone kinase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006071 - glycerol metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=57464
     Region          3..541
                     /region_name="PRK14479"
                     /note="dihydroxyacetone kinase; Provisional; cl29418"
                     /db_xref="CDD:475197"
ORIGIN      
        1 msrfffndrk qlvndaiegi llsaphgnlv kldidpairv vargdwdksr vavisgggsg
       61 hepahagfvg kgmltaavcg dlfaspsvda vlnaivavtg drgcllivkn ytgdrlnfgl
      121 aaekakrygl kvemvivadd ialpdnkqpr giagtalvhk iagyaaeqgk slndvrdiaq
      181 qacdnlwslg vamqtcnlpg sddeegrikq ghvelglgih gepgasvvdt qnskaiidtl
      241 vtplkaqagd grfavlinnl ggvsalemal ltkelahsal keniayligp aplvsaldmk
      301 gfsltllkln dffekaihae vetlgwqkpv afaplrtvph salhdrveya psdntevsea
      361 vasvtktliq lenrlnalda kvgdgdtgst faqgardiaq rleennlpln dvptllllvg
      421 erlatvmggs sgvlmsifft aagqklhdgq plpeallsgl aqmkqyggad lgdrtlidal
      481 qpalealqkg niqaaaqaaq qgaeatakma kagagrssyv nkenldgvmd pgavavaevf
      541 ktmvdakr
//
LOCUS       WP_235168086             391 aa            linear   BCT 02-MAR-2025
DEFINITION  oligogalacturonate lyase family protein [Enterobacter hormaechei].
ACCESSION   WP_235168086
VERSION     WP_235168086.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 391)
  AUTHORS   Abbott,D.W., Gilbert,H.J. and Boraston,A.B.
  TITLE     The active site of oligogalacturonate lyase provides unique
            insights into cytoplasmic oligogalacturonate beta-elimination
  JOURNAL   J Biol Chem 285 (50), 39029-39038 (2010)
   PUBMED   20851883
REFERENCE   2  (residues 1 to 391)
  AUTHORS   Garron,M.L. and Cygler,M.
  TITLE     Structural and mechanistic classification of uronic acid-containing
            polysaccharide lyases
  JOURNAL   Glycobiology 20 (12), 1547-1573 (2010)
   PUBMED   20805221
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025934.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14583.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..391
                     /product="oligogalacturonate lyase family protein"
                     /GO_function="GO:0047487 - oligogalacturonide lyase
                     activity [Evidence IEA]"
                     /GO_process="GO:0045490 - pectin catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=44259
     Region          1..384
                     /region_name="Pectate_lyase22"
                     /note="Oligogalacturonate lyase; cl44632"
                     /db_xref="CDD:457977"
ORIGIN      
        1 makgmrvkln yevsrdpdtg vevtrltppe vtchrnyfyq kcffndgshl lfagefdghw
       61 nyylldlkda eavqltegag dntfggflsp ddkslyyvkn drtllevdlq tlaerevyrv
      121 peewvgygtw vansdctklv gieiarrdwt plndwkifhd ffhkgphcrl lrvdlktges
      181 ttihdekiwl ghpiyrpfdd ntvafchegp hdlvdarmwl vnedgsnvrk vkthaegesc
      241 thefwvpdgs aliyvsylkg qqgrtisrfn pdtgvneavm nmpacshlms nvdgsmlvgd
      301 gsgtpvdvkd tggytidndp ylyafdvakk ayyriarhdt swatvansrq vthphpsftp
      361 yekavlyssd kdgkpalyia klpeqpemlh a
//
LOCUS       WP_235168506              15 aa            linear   BCT 02-MAR-2025
DEFINITION  his operon leader peptide [Enterobacter hormaechei].
ACCESSION   WP_235168506
VERSION     WP_235168506.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 15)
  AUTHORS   Delorme,C., Ehrlich,S.D. and Renault,P.
  TITLE     Regulation of expression of the Lactococcus lactis histidine operon
  JOURNAL   J Bacteriol 181 (7), 2026-2037 (1999)
   PUBMED   10094678
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019659.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08047.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..15
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     gene            1..15
                     /gene="hisL"
     Protein         1..15
                     /product="his operon leader peptide"
                     /GO_process="GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=1759
ORIGIN      
        1 mtrvpfknhh hhhpd
//
LOCUS       WP_235169285             207 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Enterobacter
            hormaechei].
ACCESSION   WP_235169285
VERSION     WP_235169285.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15977.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..207
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=24024
     Region          37..207
                     /region_name="PRK11832"
                     /note="hydrogen peroxide resistance inhibitor IprA"
                     /db_xref="CDD:183332"
     Region          138..205
                     /region_name="HTH_46"
                     /note="Winged helix-turn-helix DNA binding; pfam15977"
                     /db_xref="CDD:435049"
ORIGIN      
        1 mlsiygkklr pqyemeriis esagveektl kkwqkisttd sgyihvivsg evefrresde
       61 lcmftvtgqc lfglssmyyn athmyglvrt ntvvrsikke vfaqlmtekn lwpdltkvls
      121 wyicvmskrd dvlvarsays vvreflyein dltvhqqrdi nvydyiqeyt nlarstiiki
      181 lsdlkkgqyi vvekgrllnl talpeky
//
LOCUS       WP_235169307             135 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease subunit S, partial [Photobacterium
            iliopiscarium].
ACCESSION   WP_235169307
VERSION     WP_235169307.1
KEYWORDS    RefSeq.
SOURCE      Photobacterium iliopiscarium
  ORGANISM  Photobacterium iliopiscarium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
REFERENCE   1  (residues 1 to 135)
  AUTHORS   Janscak,P. and Bickle,T.A.
  TITLE     The DNA recognition subunit of the type IB restriction-modification
            enzyme EcoAI tolerates circular permutions of its polypeptide chain
  JOURNAL   J Mol Biol 284 (4), 937-948 (1998)
   PUBMED   9837717
REFERENCE   2  (residues 1 to 135)
  AUTHORS   Bickle,T.A. and Kruger,D.H.
  TITLE     Biology of DNA restriction
  JOURNAL   Microbiol Rev 57 (2), 434-450 (1993)
   PUBMED   8336674
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01420.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Photobacterium iliopiscarium"
                     /db_xref="taxon:56192"
     Protein         <1..135
                     /product="restriction endonuclease subunit S"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
     Region          <1..127
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
     Site            order(46,49..50,52..53,81,83,89,93,96..97,122,124..125)
                     /site_type="other"
                     /note="TRD-CR/TRD-CR interface [polypeptide binding]"
                     /db_xref="CDD:341131"
ORIGIN      
        1 pesgdliftr eapvgecgvl kdakgvflgq rtmmyrankt ktssgylmys lmseygqkql
       61 enfsggstvp hmrvpdcski liklpslkeq riivdslnsl dfsrqkkeqk vsklsslkka
      121 lmqdlltgkv rvnve
//
LOCUS       WP_235169313             303 aa            linear   BCT 02-MAR-2025
DEFINITION  replication initiation protein [Photobacterium iliopiscarium].
ACCESSION   WP_235169313
VERSION     WP_235169313.1
KEYWORDS    RefSeq.
SOURCE      Photobacterium iliopiscarium
  ORGANISM  Photobacterium iliopiscarium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
REFERENCE   1  (residues 1 to 303)
  AUTHORS   Giraldo,R. and Diaz-Orejas,R.
  TITLE     Similarities between the DNA replication initiators of
            Gram-negative bacteria plasmids (RepA) and eukaryotes
            (Orc4p)/archaea (Cdc6p)
  JOURNAL   Proc Natl Acad Sci U S A 98 (9), 4938-4943 (2001)
   PUBMED   11296251
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015076.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03090.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Photobacterium iliopiscarium"
                     /db_xref="taxon:56192"
     Protein         1..303
                     /product="replication initiation protein"
                     /calculated_mol_wt=34333
     Region          30..157
                     /region_name="Replicase"
                     /note="Replicase family; pfam03090"
                     /db_xref="CDD:427129"
     Region          168..243
                     /region_name="PriCT_1"
                     /note="Primase C terminal 1 (PriCT-1); cl07362"
                     /db_xref="CDD:447340"
ORIGIN      
        1 mktnqlnlfk sdfieslptk pyctdelgvt firpkltain kkyiqvnrps tdlylvfdld
       61 yeysalawsd lnlpapawaa knpinghshl gyalsvgvct ssmarlaplk ylaaiqsayt
      121 eilkadrsya rlltknplhd awqttwwtde kytldyladf vdltghplrg keshglgrnc
      181 elfenvahwa ykevreywsp dykskwqeav vshtealnaq fieplpysev ksisksianf
      241 virhfspekf resqaikgrk ggqkskgggr pvgtvkpksl sqtkpweelg isratyyrnk
      301 nss
//
LOCUS       WP_235169320             203 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase, partial [Photobacterium
            iliopiscarium].
ACCESSION   WP_235169320
VERSION     WP_235169320.1
KEYWORDS    RefSeq.
SOURCE      Photobacterium iliopiscarium
  ORGANISM  Photobacterium iliopiscarium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
REFERENCE   1  (residues 1 to 203)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Photobacterium iliopiscarium"
                     /db_xref="taxon:56192"
     Protein         <1..203
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
     Region          <1..197
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 vkarkgmary rlsfhgkaah agnepqngrs aitemahwil aintltdfds gttlnagvvs
       61 ggaganivpd faevvvdvrf wdndeyaavd aqirtltetp fvdgvtitve qeahkpsmvp
      121 spqtevlmaq veavgkelgi ditwqavggg sdanltavlg iptldglgpi gagfhsadew
      181 ldlasiepri rllqqvlvki sqq
//
LOCUS       WP_235169339             127 aa            linear   BCT 02-MAR-2025
DEFINITION  protein phosphatase 2C domain-containing protein [Helicobacter
            pylori].
ACCESSION   WP_235169339
VERSION     WP_235169339.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter pylori
  ORGANISM  Helicobacter pylori
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 127)
  AUTHORS   Das,A.K., Helps,N.R., Cohen,P.T. and Barford,D.
  TITLE     Crystal structure of the protein serine/threonine phosphatase 2C at
            2.0 A resolution
  JOURNAL   EMBO J 15 (24), 6798-6809 (1996)
   PUBMED   9003755
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025053.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13672.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Helicobacter pylori"
                     /db_xref="taxon:210"
     Protein         1..127
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /calculated_mol_wt=13908
     Region          12..>126
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cl00120"
                     /db_xref="CDD:469621"
ORIGIN      
        1 mrdfkafgas irgtyhayar lpnqdaflir knqkglllvl cdglgskkdl qtgakklces
       61 vekdlnaidi qgcdlvlfnk vifsiwecll yplevynals tlqlvfigke kafigkvgdg
      121 llavlgk
//
LOCUS       WP_235169491             832 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase family protein [Helicobacter pylori].
ACCESSION   WP_235169491
VERSION     WP_235169491.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter pylori
  ORGANISM  Helicobacter pylori
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04851.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Helicobacter pylori"
                     /db_xref="taxon:210"
     Protein         1..832
                     /product="DEAD/DEAH box helicase family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=97468
     Region          1..828
                     /region_name="ResIII"
                     /note="Type III restriction endonuclease [Defense
                     mechanisms]; COG3421"
                     /db_xref="CDD:442647"
ORIGIN      
        1 mkdrapnnap nngeielpth itsnlknelr dyqkqainny lekrqsnpfq khfmfematg
       61 sgktlvmagl ilecykqgyq nfiffvnsts ilektklnfi dsvsskylfs enitindent
      121 eiksinnlne sqtsainiyf stiqglfslf tkakenaitl edlkdqklvf ladeahhlnt
      181 etkkklsdae snekhnwesv vklaleqnkd nlllefsati pneksvedky knlkvitytl
      241 kefsedkfck niyslsyenk eletrflgac vsslykella qhhnvesfkp cilfkserie
      301 dskenqerfn aflenlspld lenffnhsrn tffkdaknff dkqhytpnla allqtkfkks
      361 vqintnneke leksmlllns ledrdnpkrv ifsvdklneg wdvlnlfdiv rlknkasqkd
      421 ttkdaqligr garyypfsyn dlkpnqiefy qrkfdlfnpl salerldyha iydsefiakl
      481 keelqdlglg fanekqtipl tptkrfkyyy asntkdknkn lfnkdytdpv kvklqslhvp
      541 lfafgvrekk vdfkeenkgd ttyyiphtld kipinyflka lnlknldfkt lkkafkkhaf
      601 nnkvgfiecy isplktnfhk nqkfddnkil lklavyiien lkdtllkeqd kydvsalelk
      661 efethnksls aselekdipl yewllfkdmr kldsdlerdf ldfindhkev ldkkfkewcv
      721 lrndhftelk vfcniensph yaqgfepdfi lfaqthsdef lgftcymeak gehlehsnvw
      781 keeflemlen aalkshnkkl dlkglpfftl hnsvvnseft tafdqifkdq ec
//
LOCUS       WP_235169496             210 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Rhodococcus erythropolis].
ACCESSION   WP_235169496
VERSION     WP_235169496.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..210
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=22545
     Region          11..180
                     /region_name="NUDIX_ADPRase_Rv1700"
                     /note="ADP-ribose pyrophosphatase from Mycobacterium
                     tuberculosis (Mt-ADPRase), and similar proteins; cd24158"
                     /db_xref="CDD:467606"
ORIGIN      
        1 mndpgrhefd tldsktvytg aiialrvdtv ampggqradr evvehhgava vvaldehdnl
       61 vlihqyrhpl ghrlweipag lldaagespv eaaarelgee tglgadrwsv lvdvalspgf
      121 tdeavrvfla eglheverdd peheeadlei srvpladavd malrgdivna tavsgilaia
      181 tarstgkplr padapwpdrp rafgerksra
//
LOCUS       WP_235169357             145 aa            linear   BCT 02-MAR-2025
DEFINITION  Bbp16 family capsid cement protein [Escherichia coli].
ACCESSION   WP_235169357
VERSION     WP_235169357.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 145)
  AUTHORS   Zhang,X., Guo,H., Jin,L., Czornyj,E., Hodes,A., Hui,W.H.,
            Nieh,A.W., Miller,J.F. and Zhou,Z.H.
  TITLE     A new topology of the HK97-like fold revealed in Bordetella
            bacteriophage by cryoEM at 3.5 A resolution
  JOURNAL   Elife 2, e01299 (2013)
   PUBMED   24347545
  REMARK    Erratum:[Elife. 2015 Mar 18;4. doi: 10.7554/eLife.07482.. PMID:
            25785908]
            Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF045314.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21190.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..145
                     /product="Bbp16 family capsid cement protein"
                     /calculated_mol_wt=15136
     Region          1..144
                     /region_name="PHA00664"
                     /note="hypothetical protein"
                     /db_xref="CDD:106973"
ORIGIN      
        1 mitdkllmfs eaqavtntaa stdvidlgpi dgnrrdigvg yplefwvlvn eaaaasvdat
       61 vniqlqtsen nsswttiyds galaktalta gkrvvsakvp agvqrylrvn ysvatgplta
      121 geftagisld vdantpypir skvtg
//
LOCUS       WP_235169578             297 aa            linear   BCT 02-MAR-2025
DEFINITION  dihydrodipicolinate synthase family protein [Rhodococcus
            erythropolis].
ACCESSION   WP_235169578
VERSION     WP_235169578.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 297)
  AUTHORS   Mirwaldt,C., Korndorfer,I. and Huber,R.
  TITLE     The crystal structure of dihydrodipicolinate synthase from
            Escherichia coli at 2.5 A resolution
  JOURNAL   J Mol Biol 246 (1), 227-239 (1995)
   PUBMED   7853400
REFERENCE   2  (residues 1 to 297)
  AUTHORS   Izard,T., Lawrence,M.C., Malby,R.L., Lilley,G.G. and Colman,P.M.
  TITLE     The three-dimensional structure of N-acetylneuraminate lyase from
            Escherichia coli
  JOURNAL   Structure 2 (5), 361-369 (1994)
   PUBMED   8081752
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012904.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00701.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..297
                     /product="dihydrodipicolinate synthase family protein"
                     /GO_function="GO:0016829 - lyase activity [Evidence IEA]"
                     /calculated_mol_wt=30725
     Region          8..294
                     /region_name="TIM-like beta/alpha barrel domains"
                     /note="A large family of domains similar to triose
                     phosphate isomerase (TIM) which, in general, share an
                     eight beta/alpha closed barrel structure; cl21457"
                     /db_xref="CDD:473867"
     Site            169
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:188634"
ORIGIN      
        1 mtttrvdlag ihvplitpfe sdgrvatnal eqlahqvldd gavglvalgt taetatltew
       61 eretvldica svcrargatl ivgagsndta ssaqalgrla rwpevsaalv pvpsftrpsk
      121 agvvahfahl qssspvpliv yhvpyrtacd ldsgtlwelg tlpgvvgvky aaggidsaav
      181 elfadlphdf avlagddlfl apllalgasg gilasahvst aefvrlvkaw dsgdvdgard
      241 lgrrlstlsg alfsepnptv ikgvlhalgq iptphvrlpl laashesvar alevyrs
//
LOCUS       WP_235169358              74 aa            linear   BCT 02-MAR-2025
DEFINITION  LeoA/HP0731 family dynamin-like GTPase [Helicobacter pylori].
ACCESSION   WP_235169358
VERSION     WP_235169358.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter pylori
  ORGANISM  Helicobacter pylori
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 74)
  AUTHORS   Michie,K.A., Boysen,A., Low,H.H., Moller-Jensen,J. and Lowe,J.
  TITLE     LeoA, B and C from enterotoxigenic Escherichia coli (ETEC) are
            bacterial dynamins
  JOURNAL   PLoS One 9 (9), e107211 (2014)
   PUBMED   25203511
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037494.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18709.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Helicobacter pylori"
                     /db_xref="taxon:210"
     Protein         1..74
                     /product="LeoA/HP0731 family dynamin-like GTPase"
                     /calculated_mol_wt=8590
ORIGIN      
        1 mtikkkeild lindetkfkq tcfpsalele eslqkikeai ektqecdqef ekwikagedl
       61 ikgedfieve peee
//
LOCUS       WP_235169582             191 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2567 domain-containing protein [Rhodococcus erythropolis].
ACCESSION   WP_235169582
VERSION     WP_235169582.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022278.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10821.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..191
                     /product="DUF2567 domain-containing protein"
                     /calculated_mol_wt=19572
     Region          19..166
                     /region_name="DUF2567"
                     /note="Protein of unknown function (DUF2567); pfam10821"
                     /db_xref="CDD:431511"
ORIGIN      
        1 mislrqtrlr taiviaatsa gvsvivgvlw aflapaehll vvsegrgval tgeslhqfda
       61 savfiwlali vgvlsavaaw larlsrgpya lgglivgsav gaglmalvgs gvtklrfpaa
      121 dnpavgeiva rapnigtllv llfqplaacv vtlvlavlnp yddlgvgdhp esedpaaeve
      181 rtddevqpkl p
//
LOCUS       WP_235169610             254 aa            linear   BCT 02-MAR-2025
DEFINITION  sensor domain-containing protein [Rhodococcus erythropolis].
ACCESSION   WP_235169610
VERSION     WP_235169610.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 254)
  AUTHORS   Molle,V., Kremer,L., Girard-Blanc,C., Besra,G.S., Cozzone,A.J. and
            Prost,J.F.
  TITLE     An FHA phosphoprotein recognition domain mediates protein EmbR
            phosphorylation by PknH, a Ser/Thr protein kinase from
            Mycobacterium tuberculosis
  JOURNAL   Biochemistry 42 (51), 15300-15309 (2003)
   PUBMED   14690440
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14032.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..254
                     /product="sensor domain-containing protein"
                     /calculated_mol_wt=25107
ORIGIN      
        1 mtrrslalgl tataalfvvt gcgsddspsa dtttqvsapq vglapftaap aaplsgapld
       61 rdalqraalt lselpadfdv vpdpvddlgl apapessead ksstdpavca qvlapiatqa
      121 agsvadlsdm ftgpdftsid qdsasyadga aaaaafeklq ttlagcaeys gtdadgttit
      181 yrvggasdpn vgdasfafri itesggftlv adaivaavgt tltqvsatap spiapdvlhs
      241 masaaadrlr aqtp
//
LOCUS       WP_235169621             183 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: SAV_6107 family HEPN domain-containing protein
            [Rhodococcus].
ACCESSION   WP_235169621
VERSION     WP_235169621.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus
  ORGANISM  Rhodococcus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae.
REFERENCE   1  (residues 1 to 183)
  AUTHORS   Anantharaman,V., Makarova,K.S., Burroughs,A.M., Koonin,E.V. and
            Aravind,L.
  TITLE     Comprehensive analysis of the HEPN superfamily: identification of
            novel roles in intra-genomic conflicts, defense, pathogenesis and
            RNA processing
  JOURNAL   Biol Direct 8, 15 (2013)
   PUBMED   23768067
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037499.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18726.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Rhodococcus"
                     /db_xref="taxon:1827"
     Protein         1..183
                     /product="SAV_6107 family HEPN domain-containing protein"
                     /calculated_mol_wt=19043
     Region          71..169
                     /region_name="HEPN_SAV_6107"
                     /note="SAV_6107-like HEPN; pfam18726"
                     /db_xref="CDD:436694"
ORIGIN      
        1 mservkperv kcqrtlpael sspsdaaisr lpmsarrsfg atdashrtar agksgvawgl
       61 lrkadallee aigagdpadr frcaylaalr gagavlaaap agagskrkrs gnawvlmdaa
      121 apafgawskf fagwsatraa vetgvsivit dsdsdaffae vgrfltaved figqdtsehl
      181 ras
//
LOCUS       WP_235169683             172 aa            linear   BCT 02-MAR-2025
DEFINITION  DinB family protein [Rhodococcus erythropolis].
ACCESSION   WP_235169683
VERSION     WP_235169683.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Cooper,D.R., Grelewska,K., Kim,C.Y., Joachimiak,A. and
            Derewenda,Z.S.
  TITLE     The structure of DinB from Geobacillus stearothermophilus: a
            representative of a unique four-helix-bundle superfamily
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 66 (Pt 3), 219-224
            (2010)
   PUBMED   20208147
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024273.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12867.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..172
                     /product="DinB family protein"
                     /calculated_mol_wt=19235
ORIGIN      
        1 mpitpdtknw twvlerpcae cgfdsstvaf tdvpdlvrgn atswvevler envterpdse
       61 twsaleysah vrdvfrifkv rleqmlqfdd ptfenwdqda taeaerysdq dpatvasela
      121 daaaevanaf etvpegsrqr qglrsdgsaf tveslaayfi hdpihhlhdv sa
//
LOCUS       WP_235169723             740 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 C-terminal domain-containing protein
            [Rhodococcus erythropolis].
ACCESSION   WP_235169723
VERSION     WP_235169723.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 740)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014026.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01915.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..740
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=78122
     Region          9..734
                     /region_name="alph_arabinopyran"
                     /note="exo-alpha-(1->6)-L-arabinopyranosidase; NF041610"
                     /db_xref="CDD:469494"
ORIGIN      
        1 mtenyvngls leekasltsg sdfwhsqsvp giesilltdg phgvrkqpeg gdalglghsi
       61 patcfppavg lgsswnldli rrvgealgde akaeqvsvll gpginikrsp lcgrnfeyvs
      121 edpflsgrva aalitgiqsr gvgtslkhfa annqehdrmr vsadvdertl reiylagfey
      181 avktaapttv mcsynkingv yssqnhwllt evlreqwgfd glvvsdwgav ndrvaalaag
      241 ldlempptgt dtqivdavrg gdldesvltt aaerlstlaq rtaaartegh tydaerhhel
      301 artaaaesav llandgellp ltpggqtvav igefacspry qgagssqvvp tkldnaldai
      361 ldlegadrvt fapgftfdgt pdddmvteav daarradvav lflglpsate segfdrtdie
      421 lpadqialle avhganpntv vvlanggvvs iaswkdhaaa ilegwllgqa ggsaiadllf
      481 gitnpsgrlt etiplrlqdn psylhfpgsq qhvrygegly vgyryydsal revaypfgfg
      541 lsyttfditd tsveagensa evtvtvrnsg drsgstvvqv yvhdasesid rpeqelkgfa
      601 kvhldpdesa tvnitldtra faywsvaaqd waiepgdyei rvgfssrdia rtdtitlagn
      661 vgvgtldams tigewlahpv gsavlgaams aaagegaqsv spemmalags mplgklatfg
      721 lgiteeqveq lvaaaaqpas
//
LOCUS       WP_235169767             311 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Rhodococcus
            erythropolis].
ACCESSION   WP_235169767
VERSION     WP_235169767.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020897.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09339.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..311
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=33033
     Region          14..>196
                     /region_name="IclR"
                     /note="DNA-binding transcriptional regulator, IclR family
                     [Transcription]; COG1414"
                     /db_xref="CDD:441024"
ORIGIN      
        1 mggpekaped grprgrqspp tervvqvldy lvgrpdqrfg lselaralei skptclgilt
       61 aladrgyltr devsktyglg paliaagraa qrgfavgpia rthlekvsae fgttctasgv
      121 igdqisvlev tgpigarrsa kvgqvypfap pvglmyvlwg sdhdmdswlt kepslpvrld
      181 rerlwnvvre craagylves ldpvgqrlht lmagvathdl ppevrellge mvsslgervy
      241 lgrdissdde hpvsliaapt ydaeghqalv ltlyvggait gaeierraaa lvaaadavta
      301 evggrspvrg l
//
LOCUS       WP_235169784             524 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin-dependent oxidoreductase [Rhodococcus erythropolis].
ACCESSION   WP_235169784
VERSION     WP_235169784.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 524)
  AUTHORS   Kisker,C., Schindelin,H., Pacheco,A., Wehbi,W.A., Garrett,R.M.,
            Rajagopalan,K.V., Enemark,J.H. and Rees,D.C.
  TITLE     Molecular basis of sulfite oxidase deficiency from the structure of
            sulfite oxidase
  JOURNAL   Cell 91 (7), 973-983 (1997)
   PUBMED   9428520
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012401.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00174.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..524
                     /product="molybdopterin-dependent oxidoreductase"
                     /calculated_mol_wt=56100
     Region          241..523
                     /region_name="SO_family_Moco"
                     /note="Sulfite oxidase (SO) family, molybdopterin binding
                     domain. This molybdopterin cofactor (Moco) binding domain
                     is found in a variety of oxidoreductases, main members of
                     this family are nitrate reductase (NR) and sulfite oxidase
                     (SO). SO catalyzes the...; cl00199"
                     /db_xref="CDD:469652"
     Site            order(243,245,247,293,337,367,372,380,383,386..387)
                     /site_type="active"
                     /note="Moco binding site [active]"
                     /db_xref="CDD:238198"
     Site            293
                     /site_type="other"
                     /note="metal coordination site [ion binding]"
                     /db_xref="CDD:238198"
ORIGIN      
        1 mvtqnidehp stesrpprrr waahaisgvl aaavvlgvge lvalpinpda spfyavgatt
       61 vdrtpaware faidtfgtnd kpalfigmsi livllgavag llerrrrpig slilvllgav
      121 gvyaalqrpt adamyvfptl vgvvagvatl rllitqlevp lspgvadswl prrqflllag
      181 aalavaaaag aagkfvgqri agavanredf vvptaadpap pipagadiai agastyitpn
      241 ddfyridtal lvpqlttdsw elrihgmvdr emtlsfddlv artpiervit ltcvsnevgg
      301 vlagnakwig ypmkdlldev gvhpdadmll stsvdgftvg tpveivtdgr dailavamng
      361 eplpfehgyp vrqvvpglyg fvsatkwvte weltrfdkve aywtqrgwga qapiktssri
      421 evpaalapie pgqvlvagta waqhrgiekv evrvdngewq patlaqeysi dtwrqwswmw
      481 dagsglhtvq vratdldgnv qveertppip ggatgwhtrs ftvk
//
LOCUS       WP_235169795             207 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: Type 1 glutamine amidotransferase-like
            domain-containing protein [Rhodococcus].
ACCESSION   WP_235169795
VERSION     WP_235169795.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus
  ORGANISM  Rhodococcus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae.
REFERENCE   1  (residues 1 to 207)
  AUTHORS   Hakansson,K., Wang,A.H. and Miller,C.G.
  TITLE     The structure of aspartyl dipeptidase reveals a unique fold with a
            Ser-His-Glu catalytic triad
  JOURNAL   Proc Natl Acad Sci U S A 97 (26), 14097-14102 (2000)
   PUBMED   11106384
REFERENCE   2  (residues 1 to 207)
  AUTHORS   Lassy,R.A. and Miller,C.G.
  TITLE     Peptidase E, a peptidase specific for N-terminal aspartic
            dipeptides, is a serine hydrolase
  JOURNAL   J Bacteriol 182 (9), 2536-2543 (2000)
   PUBMED   10762256
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015534.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03575.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Rhodococcus"
                     /db_xref="taxon:1827"
     Protein         1..207
                     /product="Type 1 glutamine amidotransferase-like
                     domain-containing protein"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=21693
     Region          <62..206
                     /region_name="GAT_1"
                     /note="Type 1 glutamine amidotransferase (GATase1)-like
                     domain; cl00020"
                     /db_xref="CDD:469582"
     Site            123
                     /site_type="active"
                     /note="conserved cys residue [active]"
                     /db_xref="CDD:153222"
ORIGIN      
        1 mklflssyrf gdhrgafvdl vgrgariavi aaaadswpln arssavtsel tplraagfta
       61 eevdvrdfag apealearlr efdclwvrgg ntfvlraqla rsgadrviem lvrsgvvaya
      121 gysagacvat ptligldasd dpaevmptcg idpiwsglal idfaivphgg dslledpqvt
      181 artvaaltta gaqftvltdq eaivver
//
LOCUS       WP_235169812             693 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GmrSD restriction endonuclease domain-containing
            protein [Rhodococcus].
ACCESSION   WP_235169812
VERSION     WP_235169812.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus
  ORGANISM  Rhodococcus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae.
REFERENCE   1  (residues 1 to 693)
  AUTHORS   Gao,H., Gong,X., Zhou,J., Zhang,Y., Duan,J., Wei,Y., Chen,L.,
            Deng,Z., Wang,J., Chen,S., Wu,G. and Wang,L.
  TITLE     Nicking mechanism underlying the DNA phosphorothioate-sensing
            antiphage defense by SspE
  JOURNAL   Nat Commun 13 (1), 6773 (2022)
   PUBMED   36351933
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 693)
  AUTHORS   Picton,D.M., Luyten,Y.A., Morgan,R.D., Nelson,A., Smith,D.L.,
            Dryden,D.T.F., Hinton,J.C.D. and Blower,T.R.
  TITLE     The phage defence island of a multidrug resistant plasmid uses both
            BREX and type IV restriction for complementary protection from
            viruses
  JOURNAL   Nucleic Acids Res 49 (19), 11257-11273 (2021)
   PUBMED   34657954
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015210.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03235.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Rhodococcus"
                     /db_xref="taxon:1827"
     Protein         1..693
                     /product="GmrSD restriction endonuclease domain-containing
                     protein"
                     /calculated_mol_wt=77704
     Region          4..535
                     /region_name="GmrSD"
                     /note="DNAse/DNA nickase specific for phosphorothioated or
                     glycosylated phage DNA, GmrSD/DndB/SspE family, contains
                     DUF262 and HNH nuclease domains [Defense mechanisms];
                     COG1479"
                     /db_xref="CDD:441088"
     Region          583..665
                     /region_name="Atl1"
                     /note="Alkylated DNA nucleotide flippase Atl1,
                     participates in nucleotide excision repair, Ada-like
                     DNA-binding domain [Transcription]; COG3695"
                     /db_xref="CDD:442910"
ORIGIN      
        1 mvaarevsvq kllegtsqyl vplyqrpyqw gpdnfkvlwn dvlqlvedrp ddplathfmg
       61 slvlapvpdn iagsvtrylv vdgqqrlttv tlllaairdh lrenepasqr vfdrihnqll
      121 tnqyeddpyr lklvptqadr hvysavidas ptaggddavg gayrffrarl sdlsaideql
      181 taiqiydavt cglsvvsist dprdnvhrif qslnntglql tqgdllrnyl fmrmpdrgee
      241 ihrkfwrple ealdsndqie tlfwldlvhr rpiakrtqtf tgqqaridrf tdeaavvsev
      301 eriarlggly rlmlhpseet dpavrerlar laewdsttpa plvlhllvlr dqgeasseqv
      361 arallciesl lvrrflvgra tqglnrlfpa avqeldsslp vdealhryls egrkhyatdd
      421 qllaailtsp lfvtgraahr ktmltwierl fgskeivdda klsiehvmpq tlsrewceql
      481 aalhgadnid eihdrlvhtl gnltltgyne nmgnrefdyk rkilrassir mnqriasgse
      541 wgpeqieqrg rdlaariita wpgpvitgka spedsplwhs lnqllallpa grwttygdla
      601 kaigtgpqav gsriatspap kahrvlnvqg qvsegfrwle pertddprkv leqeglrfsa
      661 agkadptqrl stadleqlra aaddeievgs rae
//
LOCUS       WP_235169820             366 aa            linear   BCT 02-MAR-2025
DEFINITION  LLM class flavin-dependent oxidoreductase [Rhodococcus
            erythropolis].
ACCESSION   WP_235169820
VERSION     WP_235169820.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012517.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00296.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..366
                     /product="LLM class flavin-dependent oxidoreductase"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /calculated_mol_wt=40440
     Region          1..347
                     /region_name="Flavin_utilizing_monoxygenases"
                     /note="Flavin-utilizing monoxygenases; cl19096"
                     /db_xref="CDD:450250"
ORIGIN      
        1 mrfqvldiif npphpvtgee vapsdrlnrv velavlaeel gidsfsvger hagpvlssap
       61 tvvlgaiaqa tdrillstgv tvlslldpir vaedfgtidq lsrgrleivi gkgnevlqyp
      121 llgldidkqy eyltenyell klliseenvk wvgthrpslk dattlprpyd gpfriwhgsa
      181 tsfeavelaa kwgdpivtan afqprenykv lidhyreqyl ayghdpskay vgsgsgglfl
      241 adtteqaiee frpiyegava qadkrkhdpk avgkstsfrt ieeavdrgpa lvgsservae
      301 kivdyhetyg hdfqsvsvnh vldfehqkdt lrrfaeevip lvkaelsttl wtsadkdrak
      361 gftavd
//
LOCUS       WP_235169824             447 aa            linear   BCT 02-MAR-2025
DEFINITION  LLM class flavin-dependent oxidoreductase [Rhodococcus
            erythropolis].
ACCESSION   WP_235169824
VERSION     WP_235169824.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012517.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00296.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..447
                     /product="LLM class flavin-dependent oxidoreductase"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /calculated_mol_wt=48964
     Region          48..427
                     /region_name="Flavin_utilizing_monoxygenases"
                     /note="Flavin-utilizing monoxygenases; cl19096"
                     /db_xref="CDD:450250"
ORIGIN      
        1 msqaavatrt vsrvltvsav gtvrsrvvle qeyapmtstp srlaplhlav aldgagwhpa
       61 awrephsrps elfsasywtd vvttaergll dfvtiedsls vpanplepvd davdrvrarl
      121 dahlvaarla pitsniglip tittihtepf hvskavatld ytsrgragwq vkvsvsepea
      181 aqfgrrdipa ltdadrqsiv sgvlpdfvrd lfdeaaeaad vvrrlwdswe ddaeirdveq
      241 rrfidrdklh yidfegkyls vrgpsvtprp pqghpvvtal ahqrvayela artadlvfvt
      301 pfddeqvtai lgevraaeeh vqrtgealrv ftdivvffdt teetgkerla rldaqagaey
      361 rsdaltftgs aaeladlvlr wqqlgiggfr lrpgvvvddl daiagelvpe lqrrsafrte
      421 ypqtnlrgll glpidvpnry aagtpaa
//
LOCUS       WP_235169848             229 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GNAT family N-acetyltransferase [Rhodococcus].
ACCESSION   WP_235169848
VERSION     WP_235169848.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus
  ORGANISM  Rhodococcus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 229)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Rhodococcus"
                     /db_xref="taxon:1827"
     Protein         1..229
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=24355
     Region          105..>176
                     /region_name="MnaT"
                     /note="L-amino acid N-acyltransferase MnaT [Amino acid
                     transport and metabolism]; COG1247"
                     /db_xref="CDD:440860"
     Region          145..228
                     /region_name="COG3393"
                     /note="Predicted acetyltransferase, GNAT family [General
                     function prediction only]"
                     /db_xref="CDD:442620"
ORIGIN      
        1 mddhhldiir lawarelglg dsalrpahta rvvgddihvl elagsgaivg pqwfiertad
       61 isvdallqpa rlleiagdhg gritgpvdla flgdytdtpp deqllishei ddalavaslc
      121 ppddsttadl errtrwftal tdsdevlgca aysefqgfva dlttltapah rrrgigcavt
      181 llaaedalds glipqlrtsr gsavgatlpr kakfdvlgay arvhvhlps
//
LOCUS       WP_235169882             318 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6542 domain-containing protein [Rhodococcus erythropolis].
ACCESSION   WP_235169882
VERSION     WP_235169882.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042451.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20177.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..318
                     /product="DUF6542 domain-containing protein"
                     /calculated_mol_wt=34740
     Region          24..143
                     /region_name="DUF6542"
                     /note="Domain of unknown function (DUF6542); pfam20177"
                     /db_xref="CDD:466328"
     Region          <146..272
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
ORIGIN      
        1 msatqrarsg vpldkrsliv tvpglpwwgv illaagvtav gvlidatggg geltavfstf
       61 yflgclfavv aasnkalfta maqpplllfa avpightlig kdnstalrdi ainiayplvn
      121 rfpimlaatv vvliiggfry fllnqrptgp arstrsrrsa aatrdssaat treqsapetg
      181 rrrrvsdapv pgpprrrape vdeqpayrsa prrepieder plpprrspvp prvdrahqpp
      241 trrpqpdsrp vadddypsyg rrrapeptps prreermepf fasgddvspp lpprrrppgv
      301 dlpayppprv ryrdreep
//
LOCUS       WP_235169911             860 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase 2 galactose-binding domain-containing protein
            [Rhodococcus erythropolis].
ACCESSION   WP_235169911
VERSION     WP_235169911.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 860)
  AUTHORS   Skalova,T., Dohnalek,J., Spiwok,V., Lipovova,P., Vondrackova,E.,
            Petrokova,H., Duskova,J., Strnad,H., Kralova,B. and Hasek,J.
  TITLE     Cold-active beta-galactosidase from Arthrobacter sp. C2-2 forms
            compact 660 kDa hexamers: crystal structure at 1.9A resolution
  JOURNAL   J Mol Biol 353 (2), 282-294 (2005)
   PUBMED   16171818
REFERENCE   2  (residues 1 to 860)
  AUTHORS   Juers,D.H., Hakda,S., Matthews,B.W. and Huber,R.E.
  TITLE     Structural basis for the altered activity of Gly794 variants of
            Escherichia coli beta-galactosidase
  JOURNAL   Biochemistry 42 (46), 13505-13511 (2003)
   PUBMED   14621996
REFERENCE   3  (residues 1 to 860)
  AUTHORS   Juers,D.H., Heightman,T.D., Vasella,A., McCarter,J.D.,
            Mackenzie,L., Withers,S.G. and Matthews,B.W.
  TITLE     A structural view of the action of Escherichia coli (lacZ)
            beta-galactosidase
  JOURNAL   Biochemistry 40 (49), 14781-14794 (2001)
   PUBMED   11732897
REFERENCE   4  (residues 1 to 860)
  AUTHORS   Juers,D.H., Jacobson,R.H., Wigley,D., Zhang,X.J., Huber,R.E.,
            Tronrud,D.E. and Matthews,B.W.
  TITLE     High resolution refinement of beta-galactosidase in a new crystal
            form reveals multiple metal-binding sites and provides a structural
            basis for alpha-complementation
  JOURNAL   Protein Sci 9 (9), 1685-1699 (2000)
   PUBMED   11045615
REFERENCE   5  (residues 1 to 860)
  AUTHORS   Jain,S., Drendel,W.B., Chen,Z.W., Mathews,F.S., Sly,W.S. and
            Grubb,J.H.
  TITLE     Structure of human beta-glucuronidase reveals candidate lysosomal
            targeting and active-site motifs
  JOURNAL   Nat Struct Biol 3 (4), 375-381 (1996)
   PUBMED   8599764
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046887.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22666.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..860
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..860
                     /product="glycosyl hydrolase 2 galactose-binding
                     domain-containing protein"
                     /calculated_mol_wt=92693
     Region          14..>494
                     /region_name="LacZ"
                     /note="Beta-galactosidase/beta-glucuronidase [Carbohydrate
                     transport and metabolism]; COG3250"
                     /db_xref="CDD:442481"
     Region          759..>818
                     /region_name="Ig_mannosidase"
                     /note="Ig-fold domain; cl38983"
                     /db_xref="CDD:476840"
ORIGIN      
        1 mtrssadvla garwrcaate pgsvthpdal dtvtewvtas vpgtvvgalr esqsdagrak
       61 qfaspsvsss vessdwwfvt taattgegsw llqfdgltaf advwidgvlv assesmfapg
      121 evsipagvgv gervrvaihf hslaatlkar rprgrwrssm vreqglrwir ttmlgmapvf
      181 sgvpvpvgpw rgirlldkrv aavtsvstqa svhgttgrva isarltglpa sldyvtvrvg
      241 ehsqrlaaia gpdgfhdvsg vvevadaqlw wphthgapct ypvtletdgv sehlgsvgfr
      301 tvevdrsdgg frlsvngigv ycrgsvwvpt dpislqgeag ttrvleklae aglnmvripg
      361 tmfyesdhfw vecarlgilv wqdmmlatld ppdtdeffel vaaevtaylr rvrgnpalav
      421 fcggseteqq ptmlglvdqh iplihsrlpe listvapele yvssspsapr ggeqltthvg
      481 sgvahyfgvg ayrrpladvl sarvrfates lafsippsna vienefgslt vaghhpawka
      541 avprdngssw dfedvrdhyv halfgedare vrwsdperyl dlgraavcea fastlgywrr
      601 pdsrcdgalt lalrdlepgp gwgvldwngd pkapwfvlrr sakpiallvt ddgmdglrld
      661 ainetaepvv geirfrahsr sgvvpvdval pvkveahssl twsvdslvgr ftdlthvfrf
      721 gartydavtv tlegedgemv devvhllgsp arplersvgl vataraigdd ewvvdvttda
      781 aaqyvalelq gfepedswfh lapngrrtvh lrrtgqatkv igrvralnsh tsvavtppsv
      841 patrssptkr ttkktsvagn
//
LOCUS       WP_235169912             328 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1839 family protein [Rhodococcus erythropolis].
ACCESSION   WP_235169912
VERSION     WP_235169912.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020467.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08893.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..328
                     /product="DUF1839 family protein"
                     /calculated_mol_wt=36402
     Region          9..314
                     /region_name="DUF1839"
                     /note="Domain of unknown function (DUF1839); pfam08893"
                     /db_xref="CDD:430293"
ORIGIN      
        1 msrlidispd ryrphslhed drvwaqtncy tdlwievlhs lgldpvpala cafssrfdgn
       61 qwtflklkae diyalygiev aemnvwrapl ihvednlavg mlstvevdgy wlpdtlgtsy
      121 qeghtkttiv pnridrvage leyfhnsgyy mlrgedfsgv fdldrsslps fvpyveqirl
      181 npvhatnagn iaevarrnva vraagnpvre lgrkviadle wvqgagmdaf hlwsfgllrq
      241 cgasaelaad asefldtsgf sgmveaaadf rkvasgaksv qfqmaraarg ravdpreqld
      301 emavswkram dvvadtvgvd shrhlrlv
//
LOCUS       WP_235169953            1047 aa            linear   BCT 02-MAR-2025
DEFINITION  type ISP restriction/modification enzyme [Rhodococcus
            erythropolis].
ACCESSION   WP_235169953
VERSION     WP_235169953.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 1047)
  AUTHORS   Chand,M.K., Nirwan,N., Diffin,F.M., van Aelst,K., Kulkarni,M.,
            Pernstich,C., Szczelkun,M.D. and Saikrishnan,K.
  TITLE     Translocation-coupled DNA cleavage by the Type ISP
            restriction-modification enzymes
  JOURNAL   Nat Chem Biol 11 (11), 870-877 (2015)
   PUBMED   26389736
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037202.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18135.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..1047
                     /product="type ISP restriction/modification enzyme"
                     /calculated_mol_wt=118736
     Region          <303..1020
                     /region_name="COG4889"
                     /note="Predicted helicase [General function prediction
                     only]"
                     /db_xref="CDD:443917"
     Region          707..1038
                     /region_name="Type_ISP_C"
                     /note="Type ISP C-terminal specificity domain; pfam18135"
                     /db_xref="CDD:465663"
ORIGIN      
        1 mvtahdvsey mdqiksqlkg gvatelsyrp alaqlmrqfk dveasndpkh sehgapdfif
       61 qrnsnraitl gyaetkdigv nldkimkteq mlrysgyqnl fltdnlefrf ltdgeltssv
      121 rigtvsdgri iadldsyqll itelesflhq ppqkitsgkr laeimgaktr rirdeildlf
      181 stetnqsadl tkifnlmrqm lvhdlnhakf admyaqtlvy glfvarysds spatfdrhea
      241 rrlvpktnpf llhffdyivg psfdeslara vdelcavfri sdvkvivhrh lskvgdaega
      301 dpiihfyedf lkaydpkirk qmgafytplp vvrymvqhvd hllksefgls kgltdkskit
      361 knhrsyltdp rtgektkkyl dekhryhkvq ildpavgtat flnetikfiy qgfkgqegqw
      421 psyvnehllp ringfelmma pytiahlklg mtleeteags ldkrlgvylt ntleegipha
      481 pdlfslpltd aitgesavas sikserpvmi vignppyage ssnktlyadg lldkyrvepg
      541 gqskldeqns kwitddyvkf iafaedmisr ngegimamit nhgylnnptf rgmrwrlakt
      601 fdsiqildlh gnktkretsa dgtiddnvfd iktgvaiifa vkrrdsgktg vadvsfaelw
      661 gkrqtkfsal esgvdfsplq lnprsyvfsp idtdgadvye dgvlltdlfl vhatgvvtkn
      721 dkvstsfned elwakvkdfg tltaaelksk ydlkpdsrdw ildkaiidae dhqsrdyird
      781 fsyrpfdkrk ifftgktkgm vaytqmkvma hmaggtntai isgrqgqavg mmpwnlafvt
      841 dtisdlnmfy rgggtvfpvr qfhedgtets nlhpthrkkl vgslgpvddd mdvfdyvygv
      901 lysqsyreky raflksdfpr ipvpkshaef drvrkfggkl rtmhllvdqg ladystqfpk
      961 vgtgrvtsis renpriwind sqyfdnvade twnfyvggyk paqkwlkdrr dqtlsndaid
     1021 eyqrilealk rsselmaefe qdppswa
//
LOCUS       WP_235169928             330 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ABC transporter substrate-binding protein
            [Rhodococcus erythropolis group].
ACCESSION   WP_235169928
VERSION     WP_235169928.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis group
  ORGANISM  Rhodococcus erythropolis group
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 330)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 330)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 330)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Rhodococcus erythropolis group"
                     /db_xref="taxon:2840174"
     Protein         1..330
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=34557
     Region          42..297
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(123..124,127,149)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238566"
ORIGIN      
        1 mrqqwvlrat alaatatalv gcsvggddad asetgessav papqkllald efaalnaltl
       61 gvrpdtvfat lqshaakeil qsegievidk ptffqspdve qiaavhpdri llsdvgslts
      121 itsqaneiap ttvlayaapw revlntaata lgresearei vsrletkfae vsgtvevqpq
      181 tlsvlvgfsg giytvipesp mssiieeagf grpqaeldak igpntgvats svsgeevgqh
      241 aadamvvtsg niydgalvha nplfneiaav kagrtadvsg elwfgsypfa vywiledlqa
      301 ladrtltgae lqgriasdtd avtrwkafsk
//
LOCUS       WP_235169989             210 aa            linear   BCT 02-MAR-2025
DEFINITION  MT-A70 family methyltransferase [Rhodococcus erythropolis].
ACCESSION   WP_235169989
VERSION     WP_235169989.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 210)
  AUTHORS   Bujnicki,J.M., Feder,M., Radlinska,M. and Blumenthal,R.M.
  TITLE     Structure prediction and phylogenetic analysis of a functionally
            diverse family of proteins homologous to the MT-A70 subunit of the
            human mRNA:m(6)A methyltransferase
  JOURNAL   J Mol Evol 55 (4), 431-444 (2002)
   PUBMED   12355263
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016921.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05063.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..210
                     /product="MT-A70 family methyltransferase"
                     /calculated_mol_wt=23774
     Region          12..189
                     /region_name="MT-A70"
                     /note="cl01947"
                     /db_xref="CDD:470404"
ORIGIN      
        1 mitnptehhr ppgeltkpda pttyrtilad ppwdiqqkgg rgasrhynlm gldriknmpi
       61 adladdnahl wlwvtnatlr dgfdvmeawg ftprspltwv kpriqlgnyl rnatehllfg
      121 trgrapvnyr sqptwmfapl qdhshkpeeq yaviervspg pylelfarra qpgwdawgnq
      181 idsavtipgy pvpsdaeatr qqprshprvt
//
LOCUS       WP_235169995             248 aa            linear   BCT 02-MAR-2025
DEFINITION  SAF domain-containing protein [Rhodococcus erythropolis].
ACCESSION   WP_235169995
VERSION     WP_235169995.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 248)
  AUTHORS   Iyer,L.M. and Aravind,L.
  TITLE     The emergence of catalytic and structural diversity within the
            beta-clip fold
  JOURNAL   Proteins 55 (4), 977-991 (2004)
   PUBMED   15146494
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020250.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08666.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..248
                     /product="SAF domain-containing protein"
                     /calculated_mol_wt=25873
     Region          64..>186
                     /region_name="CpaB"
                     /note="Flp pilus assembly protein CpaB [Intracellular
                     trafficking, secretion, and vesicular transport,
                     Extracellular structures]; COG3745"
                     /db_xref="CDD:442959"
ORIGIN      
        1 mpsarsrspr rsdplrsqld ltpstldrvv eltrgtrfrt atvrkiaava laalgvvlff
       61 rgdpatdtva vvvssrdltp gqviansdve ireidskqlp egvvsdtelv vgrtvagpir
      121 tgetvtdvrv lsprlaglsv gtddarivpv rladaavadi lrsgdvvdvl tvgpdtsrtd
      181 tsrpdtpnes iadkapqila agavvalvtt sestrnqqeq villalptpa anvvaaasls
      241 naitvtfr
//
LOCUS       WP_235170059             342 aa            linear   BCT 02-MAR-2025
DEFINITION  P-loop NTPase fold protein [Helicobacter pylori].
ACCESSION   WP_235170059
VERSION     WP_235170059.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter pylori
  ORGANISM  Helicobacter pylori
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 342)
  AUTHORS   Aravind,L., Iyer,L.M., Leipe,D.D. and Koonin,E.V.
  TITLE     A novel family of P-loop NTPases with an unusual phyletic
            distribution and transmembrane segments inserted within the NTPase
            domain
  JOURNAL   Genome Biol 5 (5), R30 (2004)
   PUBMED   15128444
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019313.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07693.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Helicobacter pylori"
                     /db_xref="taxon:210"
     Protein         1..342
                     /product="P-loop NTPase fold protein"
                     /calculated_mol_wt=40141
     Region          12..>117
                     /region_name="KAP_NTPase"
                     /note="KAP family P-loop domain; cl46386"
                     /db_xref="CDD:480726"
ORIGIN      
        1 msensiieik ereilkekii ellkkskdqn kpvaiainge wgigktylwk nglapliree
       61 lkknpiytsv fgkkdeqaii edlvaqflsa ekqktnsirn iingilsfls vhfgvkinvn
      121 vdflfkmlkk ehmentivci deferlsdki pvqdilglis elkehkgccv ivicnyfklf
      181 tdetqkifda ycekvfdrmf nfspcakeqi evmgghpikt dfeaypymkd tfniddnttn
      241 lrtfqklnni ydelqlkkyp dddefkkiyq yllysivyac yfdlydkyyt sfnsfpiklp
      301 ielkgntidl lspnstifke vmeqtstnnk kwyreyknkr fl
//
LOCUS       WP_235170077             947 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Rhodococcus erythropolis].
ACCESSION   WP_235170077
VERSION     WP_235170077.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 947)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 947)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 947)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 947)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..947
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..947
                     /product="ATP-binding protein"
                     /calculated_mol_wt=99774
     Region          320..375
                     /region_name="HAMP"
                     /note="Histidine kinase, Adenylyl cyclase,
                     Methyl-accepting protein, and Phosphatase (HAMP) domain;
                     cd06225"
                     /db_xref="CDD:381743"
     Region          412..608
                     /region_name="KdpD"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; COG2205"
                     /db_xref="CDD:441807"
     Region          <553..767
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <681..897
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
ORIGIN      
        1 mkhdshttts wwsigewrlg wkviavlalp mivavvlgal rvqteleeaa qlsssseral
       61 avpaainles alyelaeaas artdtgpatq avsdamdqlv daarafqsdd tlndqvtsal
      121 aesrsiteei sagavaparl vsrvgevsra lsstftsvve hsqrpalree ggrlaalwda
      181 rralaeqril fgsgdpdqqa rtsmvsaaga elvalnnila idgsndtvqt lsnsaqnrin
      241 algstpstsp lgsrvgadlk sgndqynslt dttvtefgdt vtaesnaart aalrdtaivl
      301 gavllalaia lvisrslidp irrlrfaalq aarrglpdai eriragastd eldfarvpir
      361 theeigelar avddmhgqai tlageqatlr rqvndmfetl srrnkslvdq qlglieqleq
      421 deddprrlen lfrldhiaar mrrngdnllv lagtdvrrar tapvalgdtl raavsgveey
      481 rrvelgqipp gvvtghaapd vvhliaelld nslrysppet tvsinaarti dgsmiveiad
      541 lgigmspadi ldanerlaag gemsadtarr mglfvvsris rrytisvrlr ptatssthsg
      601 itatvllpts ildssrapei rtprtgpvat vertpppapp apvwsqpvpt asappqpatr
      661 sfadlprrtp gistdrtetf apitpestpt atpsglprrt pgtsgvpqvs tsttpapaap
      721 vstfapqldp aganastslp vrtpspesns saqgpeipvg pqpsttpapr hrlsaptptn
      781 taaffssrtr dgmsartsar tdsssnnngg anggtsapst mpifarmvse wlvdptaess
      841 tastggswtt dadqgwlaar tsfempvtki adsglpirdr garlvpgavg gggtaqrqas
      901 npadvqrgws syqsgvqrgr rhaavhqsdg gqsfesstml hndegeq
//
LOCUS       WP_235170098             758 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: SulP family inorganic anion transporter [Rhodococcus
            erythropolis group].
ACCESSION   WP_235170098
VERSION     WP_235170098.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis group
  ORGANISM  Rhodococcus erythropolis group
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00916.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Rhodococcus erythropolis group"
                     /db_xref="taxon:2840174"
     Protein         1..758
                     /product="SulP family inorganic anion transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:1902358 - sulfate transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=78214
     Region          30..505
                     /region_name="SUL1"
                     /note="Sulfate permease or related transporter, MFS
                     superfamily [Inorganic ion transport and metabolism];
                     COG0659"
                     /db_xref="CDD:440424"
     Region          551..753
                     /region_name="CynT"
                     /note="Carbonic anhydrase [Inorganic ion transport and
                     metabolism]; COG0288"
                     /db_xref="CDD:440057"
ORIGIN      
        1 mstqsvvhaq ssadesvvgd ssppgggsrr yleqlirydv paslvvflva lplslgiaia
       61 sgapimagli aaivggvvag avggsplqvs gpaagltvvv aeligkfgwk vtclitvgag
      121 llqivfglsr iaraalaiap vvvhamlagi gitialqqvh vllggssass aldnlrqlpa
      181 qigalhvedl miglvviatl lgwrylpagv rkvpaalvgi vlatlaslvl pidveriald
      241 gslldsiglp alpdgqwlgv atgiltiali asvesllsav avdkmhsgpr snfdremlgq
      301 gtanmvsgai gglpvtgviv rsatnveaga ksrassimhg lwillfsaal aglvqqipks
      361 alagllivig iqlvklahir larrtgdlwv ygitvvgvvf lnllegvlig lalaiallvw
      421 rviratvtae elgdndsgkw rvlvegsctf lvlpkltsvl agipprsdvt velsvdfldh
      481 avfdvieewa rqyelaggsv iidevgsvsm esattgppkr gaavtdlrgl lapwgswqpq
      541 asgrnlsspp alrpildgvs nyhrhraeai rphmdqlrdg qnpdslfltc adsrvvpnii
      601 tssgpgdlft vrnvgnlvpa ggrdtsveaa lafgidelgv ssvivcghsg cgamqalltn
      661 sssesgvvge wlrhaetslq aytsghpvar aaaeagfsev dqlgmvnvav qlqtlerhpl
      721 vgqarvdgrl riaglffdig sarvievtas gigqliet
//
LOCUS       WP_235170111             317 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Rhodococcus
            erythropolis].
ACCESSION   WP_235170111
VERSION     WP_235170111.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 317)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 317)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 317)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 317)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..317
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=33865
     Region          15..307
                     /region_name="drrA"
                     /note="daunorubicin resistance ABC transporter ATP-binding
                     subunit; TIGR01188"
                     /db_xref="CDD:130256"
ORIGIN      
        1 msgtipaisv rglrkrygdq qvldgldlsv pagsvyallg angagkttav riltalipfd
       61 agevtvaghs lpddpqnvrr risvtgqyaa vdtlltgsen ltllgelnhl grrrsrrrad
      121 elldqfhltd fgdkragdys ggmlrrldia mslvakpdiv fldepttgld prsrhemwsi
      181 vrdltasgvt iflttqylde adeladtvgv lsdgrlvaeg tpeelkrlvp gghvalqfen
      241 ltqldlaaas lpqahanaet ltlhipsdga vpsikailds iddpsitvek fsvhtpdldd
      301 vffaltgsge peiasvr
//
LOCUS       WP_235169887             141 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: limonene-1,2-epoxide hydrolase family protein
            [Actinomycetes].
ACCESSION   WP_235169887
VERSION     WP_235169887.1
KEYWORDS    RefSeq.
SOURCE      Actinomycetes (high G+C Gram-positive bacteria)
  ORGANISM  Actinomycetes
            Bacteria; Bacillati; Actinomycetota.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   Arand,M., Hallberg,B.M., Zou,J., Bergfors,T., Oesch,F., van der
            Werf,M.J., de Bont,J.A., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Rhodococcus erythropolis limonene-1,2-epoxide
            hydrolase reveals a novel active site
  JOURNAL   EMBO J 22 (11), 2583-2592 (2003)
   PUBMED   12773375
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019473.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07858.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Actinomycetes"
                     /db_xref="taxon:1760"
     Protein         1..141
                     /product="limonene-1,2-epoxide hydrolase family protein"
                     /calculated_mol_wt=15398
     Region          1..118
                     /region_name="LimA"
                     /note="Limonene-1,2-epoxide hydrolase LimA/EphG [Secondary
                     metabolites biosynthesis, transport and catabolism];
                     COG4308"
                     /db_xref="CDD:443449"
ORIGIN      
        1 mssstatvna mfaaltdfdv daaaelmtdd ivwqnvslpt lrgkktvvra lrlvtkpslk
       61 feaemhhivg dettvltert diltvgplri efwvcgtfel rdgkvcvwrd yfslrdvawg
      121 vvtavgravv gngtrsrlap a
//
LOCUS       WP_235170226             223 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-binding protein [Rhodococcus erythropolis].
ACCESSION   WP_235170226
VERSION     WP_235170226.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13460.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..223
                     /product="NAD(P)H-binding protein"
                     /calculated_mol_wt=24243
     Region          1..217
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(7,9..10,12,33..35,71..73,111..113,126,130,149..152)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187560"
     Site            order(88,113,126,130)
                     /site_type="active"
                     /db_xref="CDD:187560"
ORIGIN      
        1 mkvvifgatg mvgnsvmrec lddprigtvv tvgrnpagtt dpkivdivhr dlldfsaiet
       61 dlsgadacff clgvssagmn eadytritrd itlaaattls rvnpqmvfvy vsgesadste
      121 tsktmwkrvr gatenvllal pletyilrpg firprpgsps ktwwykvfyq vsvplypllr
      181 kvwpssvtts enigkamial aanapdlpdr vlrsdkinel aqa
//
LOCUS       WP_235170263            1119 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase [Rhodococcus erythropolis].
ACCESSION   WP_235170263
VERSION     WP_235170263.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012371.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00144.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1119
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..1119
                     /product="serine hydrolase"
                     /calculated_mol_wt=118345
     Region          62..233
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
     Region          174..334
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
     Region          406..654
                     /region_name="DAP2"
                     /note="Dipeptidyl aminopeptidase/acylaminoacyl peptidase
                     [Amino acid transport and metabolism]; COG1506"
                     /db_xref="CDD:441115"
     Region          672..999
                     /region_name="AmpC"
                     /note="CubicO group peptidase, beta-lactamase class C
                     family [Defense mechanisms]; COG1680"
                     /db_xref="CDD:441286"
ORIGIN      
        1 mttpttlesp aavpraeerr sarihdyasv vtptgiavsa sgriayvrte snpgadtneh
       61 siwlaspqrq ltvgpadtsp awhpvstllv fvrpdssgtp qlwkvdaggg pavqmttaeq
      121 lplgagapvf spdgariafs apvdrtaags shllvakrln ykvdgsgvrg svrahlfefd
      181 latgslrqlt dgdwdashpa yspdgtelaf taamdgdadl trassawtvs ltdlaaaprm
      241 lghargiagp lawtpagdav vavgwhtpii hnsellvlhr dqrmedrslt seldrnvmpg
      301 gtgypggaps ftadgnivfc irnhgstelh kvdfgsgsls plligeqavv sglaltsgra
      361 vvalatatsf gevavidlet raveivteln telttsvafp vaterwfdis dgtrvqgwil
      421 rdpnltgtgp lvldvhggph nawtgtptlm hayhaelval gytvlminpr gsdgygndff
      481 dgvrdgwgea dradllepve tlvaegvadp kqlvltgysy ggfmtcalts vtdrfavava
      541 gglvcdiant agpsdegill qtiefdpqss rvqelsplgr vsqvttptli lhggsdvrcp
      601 vnqaeqwfgg lrlagtptel vvfpdashaf vltgqpshrl gystrlvdwi erhlsptsal
      661 ttvdpdywqy rldtlsakyg vpgaslgilt ttrsgfdrtv vtsgvvstrt gvaatpdtlf
      721 qmgsiskvwt atlimqlvee glldldapvr nilpdfavdd avatatvttr qllthtsgid
      781 gdvfidggrg ddcveryvaa lkstvqlfap gtdwsycntg fviagriiev lrgkswdavl
      841 reriieplgl aktttlpeet alhraavghv gggdnlaqtp qfliprsmgp aglinstaed
      901 lllfaqdsmr edpillqrst hlamleerrq igdvssadim gttwllhnwn gvvahghngg
      961 tlgqqsflrv vpscgiavvl manggamdal sgdllaevig siggvavtpa fspgdphtrt
     1021 tsspeeldal cglyrdaaad fvlertggsl tarrtdhidp sinaesaesi slslievhpg
     1081 vfatqlpqsa gwiritfsdt gstqllhvgs rayprvnnr
//
LOCUS       WP_235170267             534 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Rhodococcus erythropolis].
ACCESSION   WP_235170267
VERSION     WP_235170267.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 534)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..534
                     /product="AMP-binding protein"
                     /calculated_mol_wt=57622
     Region          11..532
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(187,190..195,197..198)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341283"
     Site            order(190,301..302,322..327,418,430,433,444,524)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341283"
     Site            order(190,230..231,277,279..280,283,301..302,322..327,418,
                     430,433,441..444,505)
                     /site_type="active"
                     /db_xref="CDD:341283"
     Site            order(230,279..280,283,301,441..443,499,505)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341283"
ORIGIN      
        1 msvskalaan ntplsplrfl ersaavfpdr tavvhgdrty tyrefgdeva alarvlreri
       61 qpgdrvayla pnvpemlfah favplaggvl ialnsrlagp eleyildhsg tailfvdsef
      121 vgsvsssktn vaslreiiei pdstvpypev paaivtgqya dliaeaeala dqplhwgvdd
      181 eqqciainyt sgttgkpkgv myshrgayln slgetfhngf dgstkylwtl pmfhcngwct
      241 pwavtqaagt hiclravrad aiwdaidnlg vthlcgaptv cstiadaeqa hkvdalritt
      301 agappsptii gkledigvtv vhvygltevy gpyticeyqe awddkpqser aallsrqgvg
      361 mvqaenarvv daemndvpad grtmgeivlr gnnvmlgyyr detataeafa ggwfhsgdlg
      421 vmhpdgyiql kdrakdiiis ggenistvev eqaimshpav vdvavvgvpd ekwgerpkaf
      481 vvlgkglqas aeeivehtrt llagykvprd ivfpldlprt ptgkvlkfel rask
//
LOCUS       WP_235170314             289 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MaoC/PaaZ C-terminal domain-containing protein
            [Rhodococcus erythropolis group].
ACCESSION   WP_235170314
VERSION     WP_235170314.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis group
  ORGANISM  Rhodococcus erythropolis group
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 289)
  AUTHORS   Fukui,T., Shiomi,N. and Doi,Y.
  TITLE     Expression and characterization of (R)-specific enoyl coenzyme A
            hydratase involved in polyhydroxyalkanoate biosynthesis by
            Aeromonas caviae
  JOURNAL   J Bacteriol 180 (3), 667-673 (1998)
   PUBMED   9457873
REFERENCE   2  (residues 1 to 289)
  AUTHORS   Steinebach,V., Benen,J.A., Bader,R., Postma,P.W., De Vries,S. and
            Duine,J.A.
  TITLE     Cloning of the maoA gene that encodes aromatic amine oxidase of
            Escherichia coli W3350 and characterization of the overexpressed
            enzyme
  JOURNAL   Eur J Biochem 237 (3), 584-591 (1996)
   PUBMED   8647101
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013722.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01575.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Rhodococcus erythropolis group"
                     /db_xref="taxon:2840174"
     Protein         1..289
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /calculated_mol_wt=30041
     Region          2..282
                     /region_name="PLN02864"
                     /note="enoyl-CoA hydratase"
                     /db_xref="CDD:178455"
ORIGIN      
        1 maidlevals aeptvreasw tdrdvmlyql glgaganald paeltwvyek glkvlptfam
       61 vagqgvsagv lpapsmsmpg ididlrkilh ggqsltlhap ipstgaaris srvadvwdkg
      121 kaavivleta ahdldgnplw ttgmqiwarg eggfggsagp evvagvpdqa pdkvltssts
      181 psqalvyrls gdmnplhadp afakmagfda pilhglasyg ivckavvdgi ldgdptrvkn
      241 ysvrfagslf pgesittsvw qdgntltlaa tcperenspv lthatmein
//
LOCUS       WP_235170325             168 aa            linear   BCT 02-MAR-2025
DEFINITION  ClbS/DfsB family four-helix bundle protein [Rhodococcus
            erythropolis].
ACCESSION   WP_235170325
VERSION     WP_235170325.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019632.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08020.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..168
                     /product="ClbS/DfsB family four-helix bundle protein"
                     /calculated_mol_wt=18592
     Region          6..166
                     /region_name="DfsB"
                     /note="Uncharacterized conserved protein DfsB/IRC4,
                     DUF1706 (PF08020) domain [General function prediction
                     only]; COG4283"
                     /db_xref="CDD:443424"
ORIGIN      
        1 maqtlsreel aseldtaysk ldallesaae advfdvvavd awtvhdvlav rvwwaeavve
       61 wigaglrdet pqtpaagykw tqtpalnqsv veasagtsvr elrdrlraav aalrryvetl
      121 dedqllsvgv fswtrtwpvs rwiavntitq yaslskmirr vlksnnqs
//
LOCUS       WP_235170341             180 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Rhodococcus erythropolis].
ACCESSION   WP_235170341
VERSION     WP_235170341.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 180)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 180)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13669.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..180
                     /product="VOC family protein"
                     /calculated_mol_wt=20122
     Region          8..148
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 msryfgplrq lgfvvndids alkhwidvvg vgpfffvedq plndfvfrgk ssaprfsval
       61 ahsggaqiel iqqhndepsa frefadrgle glqhvaywtt dfdrymeesk nrglvelqsg
      121 rsgsgapder fvyyedgpyp gtvieisevs grkgdlfrav eaaskewdgs npirdmrkvl
//
LOCUS       WP_235170343             253 aa            linear   BCT 02-MAR-2025
DEFINITION  enoyl-CoA hydratase-related protein [Rhodococcus erythropolis].
ACCESSION   WP_235170343
VERSION     WP_235170343.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012596.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00378.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..253
                     /product="enoyl-CoA hydratase-related protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=26986
     Region          1..249
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     Site            order(23,25,57,61..65,97,99..101,123..124,127)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(63,101)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(89,110..113,125..128,134,136..138,140..141,146..147,
                     149..150,152..153,156,167,170,185,188..189)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
ORIGIN      
        1 mstvstdrhd rvlivriere errnainret aegieaalnl ldddpdlwvg iitgtpsifc
       61 agtdirerad lrmprggeyg virrrrnkpl iaavegyalg ggfeialacd livasataqf
      121 glpetkrglv atsgalfrap ralpinvare llitgrtldp erakdlgvvn avtaegkald
      181 ealvmaaeic essptsvsls lkaidalyad adavgwevtd dakdavlrsp diaegidafa
      241 srrtprwsgl ppa
//
LOCUS       WP_235170382             313 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1214 domain-containing protein [Rhodococcus erythropolis].
ACCESSION   WP_235170382
VERSION     WP_235170382.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018452.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06742.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..313
                     /product="DUF1214 domain-containing protein"
                     /calculated_mol_wt=34147
     Region          26..308
                     /region_name="COG5361"
                     /note="Uncharacterized conserved protein [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:444136"
ORIGIN      
        1 msaiavnvln fnraesdlmf arlaagvglg twnhtrdlgs ldnqpiirqn rdtlyssaii
       61 dvrenvtitv pdtgkryisv wvvsqdhygp vilrdpgehl ltrelvgtdy aalivrilvd
      121 pnspedvtev nrlqdaltid gggtgefpmp dydeqsqtet rdallalarg ittydhsfgt
      181 aaevdpirhl lgtasgwggl peyeatyvnf degfpvgeyr lrltdvpvda fwsvslynaa
      241 gyfeenalgv nsinsltaal dadgsttirf gvhldgvana lpimpgwnyv lrlyrphpsv
      301 ldgswtaprp eal
//
LOCUS       WP_235170473             245 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Rhodococcus erythropolis].
ACCESSION   WP_235170473
VERSION     WP_235170473.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..245
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=25395
     Region          4..245
                     /region_name="PRK12937"
                     /note="short chain dehydrogenase; Provisional"
                     /db_xref="CDD:171821"
ORIGIN      
        1 mtdtttrvai vtgasggigr ataeklaadg mavavhysgn lqraqqtvds ivtaggraia
       61 vhadvadege vaalfdtvee efggidvvvh aagimilstv aelnfddfdr mhrtnvrgtf
      121 vvdqqaarcv rrggaiinfs tsvkklafpt yaayaatkga vdaitlvlak elrgrditvn
      181 avapgptatd lfldgkdeat venlsklapl erlgtpvdia eavaflagpa rwvngqviyv
      241 nggvi
//
LOCUS       WP_235170435             340 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Rhodococcus
            erythropolis].
ACCESSION   WP_235170435
VERSION     WP_235170435.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 340)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 340)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 340)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..340
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=35232
     Region          12..314
                     /region_name="FecB"
                     /note="ABC-type Fe3+-citrate transport system, periplasmic
                     component [Inorganic ion transport and metabolism];
                     COG4594"
                     /db_xref="CDD:443650"
ORIGIN      
        1 mklktrpgyl sklgasllvs vvaltaaacs sseagqatel aegthavthe fgetsvpddl
       61 grivsldeya algllavgit pdvvftswgs eigqdilasa gtevvtvppl gappieqvla
      121 qdpglvifts mgdrsyydsi estvptvpvp avttpwrenl affgrafdrq svadkltgal
      181 egkiadvsar srgeantvsv lmsssgilat tteqappsll laesgfgrpe sqranaaggl
      241 pyaplsdeai paqdarivav fdegvyefgk vasvpgfssl saaqenrvak vngdmwlath
      301 pfatfwmied mdamaggnla gtgtesvaan ryqeftalta
//
LOCUS       WP_235170478             327 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Rhodococcus
            erythropolis].
ACCESSION   WP_235170478
VERSION     WP_235170478.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 327)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 327)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 327)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..327
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=34475
     Region          25..300
                     /region_name="FecB"
                     /note="ABC-type Fe3+-citrate transport system, periplasmic
                     component [Inorganic ion transport and metabolism];
                     COG4594"
                     /db_xref="CDD:443650"
ORIGIN      
        1 mrairsssfg srviaataaa vvgamlmtgc ssssadseqt dvrtvasayg dievpvsper
       61 vvaasydtpw qlmslgvkpa avqdygkwis eftqeqqafv dglptigpfg emnfeaiaaa
      121 dpdiivgdad evdqaafdrl sgiaptvivk gesrgdwkti tteiaeaigk tdvlestrtt
      181 yetnlervrg eyadviannk wihislgdap gafsvqqptg aignlvvnel glaygpgvpt
      241 nytdagyesy pmeqladimn gvtvvlypln adgstsaavq avlddnlftr lpaaqaghvy
      301 glqssvtdfv tangwlneve tkvfatl
//
LOCUS       WP_235170514             483 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rhodococcus erythropolis].
ACCESSION   WP_235170514
VERSION     WP_235170514.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..483
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=48891
     Region          30..421
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(34..35,38..39,42,73,123..124,126..128,131,151,
                     154..155,158,228,231..232,235..237,290,318,322,378..379,
                     383,387,404,407..408,411..412,415)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mhsptdapag twrqllsgry lgtatvlagg valyatnvyl ttsllptaid diggqqyyaw
       61 tatvfliasv issmlvtnvl aargprgayl iglaifalgt vvcavsptme lllvgrtiqg
      121 sgggllaglg yavinaalpr hlwtrgaalv samwgvgtfa gpaiggvfaq fdawrwafgv
      181 lviatiavaa lvpgalpahe pgsttsspvp vlslalltaa allvsvagil sniavtaamv
      241 laavlllvaf vaadrrsrhg vlppstfnas slkwvyltiv vlavastvet fiplfgqrla
      301 gmaplaagfl gaalalgwtl geipsasata prmvrrivvg gpilvaiglg imaaflteha
      361 gagaivawvi gllvagvgig iawphlavga mtsvtdpgeg arasaaintv qlianafgaa
      421 lagvlvnige pstlrsaqll lvtfaaiaiv giavavralp rrldkidrse saldrpdivh
      481 dtr
//
LOCUS       WP_235170543             728 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5682 family protein [Rhodococcus erythropolis].
ACCESSION   WP_235170543
VERSION     WP_235170543.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040143.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18934.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..728
                     /product="DUF5682 family protein"
                     /calculated_mol_wt=78550
     Region          26..724
                     /region_name="DUF5682"
                     /note="Family of unknown function (DUF5682); pfam18934"
                     /db_xref="CDD:436841"
ORIGIN      
        1 mtiaipdlrv rvfgirhhgp gsarsvrqgl eefspdvlli egpsdadplv mlaasesmep
       61 piallayatg epskaafwpf avfspewqal kwaasngvqa rfcdlpafnv ladqgirttr
      121 egdplaelas aagfddterw wdsviesssg adsfdaitea mealretvpi deetahreay
      181 mrqvlrktlk ggaervavvc gawhapalvg algpaapdar ilkgmskvkt sltwvpwths
      241 rlssasgyga gitspgwyhh lftandktit rwltkvarvl rdedlpissa hvieavrlad
      301 tlaalrsrpl aglsevteat rsvmcdgndv lldlitrrlv vgealgsvpe etptvplead
      361 lrarsktlrl kqqagaknld ldlrrdidve rshllhrlgi ldidwgtpad sevrstgtfr
      421 etwalqwkpe fsvsvieasl wgttvaeaaa srvvskihep ditlasligl lensllanlp
      481 aalsavlesv ktvaaldhdv shlmaalptl trtlrygdvr gtdvsalidv adsllirict
      541 glavavtgld dpsaeefrdh ldkvhaavmv rddrdasarw lqamagvidr ddvngllvgr
      601 mvrllrdsgs itetaaaqrl sralsvgsvp takagwvdgf lgggglvlvh dralltlidt
      661 wvrhlreqdf idtlpllrrt fgafesgerr aigqavrggr rvettvetda rrgsaamvvv
      721 aqilgvra
//
LOCUS       WP_235170548             615 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3556 domain-containing protein [Rhodococcus erythropolis].
ACCESSION   WP_235170548
VERSION     WP_235170548.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023500.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12077.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..615
                     /product="DUF3556 domain-containing protein"
                     /calculated_mol_wt=68100
     Region          1..580
                     /region_name="DUF3556"
                     /note="Transmembrane protein of unknown function
                     (DUF3556); pfam12077"
                     /db_xref="CDD:432313"
ORIGIN      
        1 mgfkegnfpp vdpatfmdkp flerlrdmst hwvdygfgtp kmvhtvyimk llflylaagt
       61 avatltsgls wfdvgswwnq pivyqkliiw tmmlemlgla gswgplaghf kpmtggvlyw
      121 irpgtirlpp wpgkvpltsg dsrsvfdvfi yvaavanllv aavlpgvhtt gldsafadsa
      181 glvrptvlys flvlmvilgl rdkvpfiaar seqylpaiff ftflpfvdmi lalkllivmv
      241 wigagvskfg rhfslvvppm lsntpwipsk kikrahyrnf pedlrpshlg ggvahvagtm
      301 veivtplill fstnktltil avilmvgfhl fiastfplav plewnllfay asvflflgfp
      361 awdgyglgam sspwitagii aalaffpilg nlrpdlvsfl psmrqyagnw asatwafapg
      421 aeakidqyik rpspdtrnql mtmypedvsd vvlhqllgwr smhsqgralf slmirhlgdd
      481 intyslreae fmcnsivafn fgdghlhdak liaaiqrrcn fapgeflvtw iesqpihkgt
      541 qeyqvidaal gviergtfkv adavaeqpwl pngpipfdvq wtldvradra atdpqvvsep
      601 kmrtrasgse qevsk
//
LOCUS       WP_235170570              85 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: WhiB family transcriptional regulator [Rhodococcus
            erythropolis group].
ACCESSION   WP_235170570
VERSION     WP_235170570.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis group
  ORGANISM  Rhodococcus erythropolis group
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 85)
  AUTHORS   Kormanec,J. and Homerova,D.
  TITLE     Streptomyces aureofaciens whiB gene encoding putative transcription
            factor essential for differentiation
  JOURNAL   Nucleic Acids Res 21 (10), 2512 (1993)
   PUBMED   8506145
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014520.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02467.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Rhodococcus erythropolis group"
                     /db_xref="taxon:2840174"
     Protein         1..85
                     /product="WhiB family transcriptional regulator"
                     /calculated_mol_wt=9358
     Region          22..75
                     /region_name="Whib"
                     /note="Transcription factor WhiB; pfam02467"
                     /db_xref="CDD:426788"
ORIGIN      
        1 mstdeisnla ellpisdgrt wwqaecrgdp epdrwfpfps egydyatdvc nrcpivtscr
       61 efasvtgqtg iwggvkfeqg rivaa
//
LOCUS       WP_235170648             359 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Rhodococcus
            erythropolis].
ACCESSION   WP_235170648
VERSION     WP_235170648.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024945.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13556.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..359
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=38163
     Region          87..357
                     /region_name="CdaR"
                     /note="Sugar diacid utilization regulator CdaR
                     [Transcription, Signal transduction mechanisms]; COG3835"
                     /db_xref="CDD:443046"
ORIGIN      
        1 mqglmyrlae ldadsaglvr vidyfdslvr hgadtasllr asaqladcva gieivehgrs
       61 kknlrrcdpr grwspepqlp psmardiavd ddvlgtvwie ragtslplde mlvdrmalta
      121 aiilqprrlp tvaehsrnll fpmdelavlt scaglgieph tpvrvvatka vsdtadssar
      181 lvisqdctpg kaagieadge ylnlvagsfa ptpelseaal sssvragisl aaaasevhti
      241 vatarfartq asattpivna ddlgalnlla pgaridhsri pdlvlakeig strqgfelle
      301 tlrtylrsgt lraaadamhl hhssvahrls klsqhvgfhv dtlenrarat ammlvldsg
//
LOCUS       WP_235170731             385 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Rhodococcus erythropolis].
ACCESSION   WP_235170731
VERSION     WP_235170731.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 385)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 385)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 385)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..385
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=41662
     Region          15..385
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(99,129,131,162,164,368..370,372,374)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mnsvsgyisd weddetralg dladkffase vvphrerfes qhfvdpqvwt kagdlgllcc
       61 sipeefgggg gtfahdlavv qaqaraldtg fgntvhsgiv ahyilaygtd dqkrrwlpkm
      121 asgeviaava mtepgagsdl kairtradre gdhyvingsk tfisngstan lfvvvaktdp
      181 tagakgvsli vvetddcpgf vrgrildkvg qqaadtsels fedvrvpidn lvggvegqgf
      241 gqlmtqlaqe rlligvtava tmeaavaetv syvkerrafg naifdfqntk fvlaecataa
      301 haarvfidsc ierhlrgeld tttaamakww lteqqvtvvd rcvqlfggyg ymreypvarm
      361 yadarvqkiy gganeimkdl iarsl
//
LOCUS       WP_235170764             391 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome P450 [Rhodococcus erythropolis].
ACCESSION   WP_235170764
VERSION     WP_235170764.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 391)
  AUTHORS   Werck-Reichhart,D. and Feyereisen,R.
  TITLE     Cytochromes P450: a success story
  JOURNAL   Genome Biol 1 (6), REVIEWS3003 (2000)
   PUBMED   11178272
REFERENCE   2  (residues 1 to 391)
  AUTHORS   Graham-Lorence,S., Amarneh,B., White,R.E., Peterson,J.A. and
            Simpson,E.R.
  TITLE     A three-dimensional model of aromatase cytochrome P450
  JOURNAL   Protein Sci 4 (6), 1065-1080 (1995)
   PUBMED   7549871
REFERENCE   3  (residues 1 to 391)
  AUTHORS   Degtyarenko,K.N. and Archakov,A.I.
  TITLE     Molecular evolution of P450 superfamily and P450-containing
            monooxygenase systems
  JOURNAL   FEBS Lett 332 (1-2), 1-8 (1993)
   PUBMED   8405421
REFERENCE   4  (residues 1 to 391)
  AUTHORS   Nelson,D.R., Kamataki,T., Waxman,D.J., Guengerich,F.P.,
            Estabrook,R.W., Feyereisen,R., Gonzalez,F.J., Coon,M.J.,
            Gunsalus,I.C., Gotoh,O. et al.
  TITLE     The P450 superfamily: update on new sequences, gene mapping,
            accession numbers, early trivial names of enzymes, and nomenclature
  JOURNAL   DNA Cell Biol 12 (1), 1-51 (1993)
   PUBMED   7678494
REFERENCE   5  (residues 1 to 391)
  AUTHORS   Guengerich,F.P.
  TITLE     Reactions and significance of cytochrome P-450 enzymes
  JOURNAL   J Biol Chem 266 (16), 10019-10022 (1991)
   PUBMED   2037557
REFERENCE   6  (residues 1 to 391)
  AUTHORS   Nebert,D.W. and Gonzalez,F.J.
  TITLE     P450 genes: structure, evolution, and regulation
  JOURNAL   Annu Rev Biochem 56, 945-993 (1987)
   PUBMED   3304150
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00067.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..391
                     /product="cytochrome P450"
                     /GO_function="GO:0004497 - monooxygenase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=41668
     Region          20..385
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(88,92,99,143,226..227,230..231,234..235,238,271,280,
                     282,305,332..334,338..342,345..346)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(164..165,226,229..230,234,278..281)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
ORIGIN      
        1 mpnspatstv dlfaddvltd pypiyaelre lgaavhlttn dvyaltryda irdaladpgt
       61 fssrsigfnp mvnealqgts lasdppvhte lratltenls pralrglagq iqtkadalva
      121 dlvtqgsfda idalarafpl eivadligft gsvrndmlrw gqaamevigp mnqrtaenfp
      181 iagelygwca qvraedlape svgrgifdae argaippdta gkiihqylga gvdttiaaig
      241 nivalfsafp dqfdlvhqnp elapaafnet lrfwvpvhaw grfvtkdvei dgtlvpagsq
      301 vailfgagnr dsrhyenpda fsvarnpvdh lsfgygshgc agqglarleg qaairalakh
      361 arrivaadpi llpsnitrsi nqldvlkvip a
//
LOCUS       WP_235170770             553 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rhodococcus erythropolis].
ACCESSION   WP_235170770
VERSION     WP_235170770.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..553
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=56611
     Region          38..417
                     /region_name="efflux_EmrB"
                     /note="drug resistance transporter, EmrB/QacA subfamily;
                     TIGR00711"
                     /db_xref="CDD:129794"
ORIGIN      
        1 msnptalpsr yvatlvaacl avmvaqvays lpgtlngtfq qdfnisgael twisaafatt
       61 mvvfeltfgv lgdmfgrkrl llggallivv gaalcasaqe vhlmwigqai agigagalyp
      121 islamiaaaa pdaqararai alwagflslg aalspmmaav ltelgswrwa fgaviaaali
      181 sfvvslgaqd ssspqgrkld lpgqaalavg liallwaltq gseigwgntt ivvgfvigvv
      241 slaafvviel rtevpllhln lfanrvyais gitavvgmfa flglcfsmsi wlgavqhvsp
      301 lkigvlflvi qgpafllvpl vsrlihsvsp rwvltsgfal iaiagficsq fdvqtstwtd
      361 fivpmlllgv gfaftvasit avaintvplr lagmasattn llrdfgfalg pvlvaaians
      421 vannevrdgl gaavgesdlg qahagavmgi geqggamaln smpvipvptd pslapgpdnp
      481 mlampssisd lafsslgsgy slaflvcalc aaasgaltlf glfgsrpese aavdlgtdvl
      541 heianvaddv nvr
//
LOCUS       WP_235170776             313 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Rhodococcus erythropolis].
ACCESSION   WP_235170776
VERSION     WP_235170776.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 313)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 313)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..313
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=33790
     Region          17..223
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(65,67,69..70,164..165,183,223)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 mtddvkihpl vspwgrfgly sflidapela ivdtgiassp aqgmapalea igrriedvrw
       61 illthghidh iggahalwel tgrraqvvih eadahllrsr qahvdeyltg rgqylddpqg
      121 vekqmasaka visgemepsi lvrggetlsl gggvtvsvhs ipghtagsva yvvdgqndvf
      181 vgdavqvhga angfpgyedp layrsslqyl rdeirpnhly lghpyrradg vaygveldrd
      241 qasealresv dievgvrgaa hqclcgglpe tdsayspfap vaeelgyegd ptlepspfft
      301 tmhgyrtqyd eee
//
LOCUS       WP_235170807             458 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase domain-containing protein [Rhodococcus
            erythropolis].
ACCESSION   WP_235170807
VERSION     WP_235170807.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040438.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20091.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..458
                     /product="alpha/beta hydrolase domain-containing protein"
                     /calculated_mol_wt=48656
     Region          34..444
                     /region_name="Abhydrolase_10"
                     /note="Alpha/beta hydrolase domain; pfam20091"
                     /db_xref="CDD:437923"
ORIGIN      
        1 miarwavatl vvvavltgtg saqseplplg navvdgpips ravgsqsrdy pfgasipdia
       61 drgyteeeff fsgetlagpy tsrmlvrrpt dpekfsgtvv tewtnvsnnf dfdclwarsa
      121 dhlihsgday vavdaqtvgi enpdtglkaw npqryarlel psvgtfvaep aayeifgqal
      181 qqirtpteva plgeleprqq iatgcsqsag alsvfantvg plygavdgyl laalssasig
      241 pdrpsiaipq pvaeatnipv lqlntetdls qfrspdsdsy rlwevagtth sdldaqtyle
      301 niarrdlgle lgpyrcavep lsripfknaq naalealkkw adggsaptsq ptllyaadga
      361 pvrdeygnal ggirlpefav ptatnsrens gpdvcgtlfg ssvpfttelv rflyptasdy
      421 msqfenatta avdagvllpd darageitag ltaqsrmk
//
LOCUS       WP_235170942             406 aa            linear   BCT 02-MAR-2025
DEFINITION  GA-like domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235170942
VERSION     WP_235170942.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 406)
  AUTHORS   Whelan,F., Lafita,A., Gilburt,J., Degut,C., Griffiths,S.C.,
            Jenkins,H.T., St John,A.N., Paci,E., Moir,J.W.B., Plevin,M.J.,
            Baumann,C.G., Bateman,A. and Potts,J.R.
  TITLE     Periscope Proteins are variable-length regulators of bacterial cell
            surface interactions
  JOURNAL   Proc Natl Acad Sci U S A 118 (23) (2021)
   PUBMED   34074781
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047257.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22775.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..406
                     /product="GA-like domain-containing protein"
ORIGIN      
        1 nqavtdaknp aeaavnalpe gdvkaelkgr ldavdgisvp evndqnsngk pdaeeaaear
       61 vfyekafsnv yqtddlyari dttslfapaa tklakstaqw atileknaga qmsqdknagg
      121 etryiyngis gsdvitvgks lggtglnmta trndmkvmtg dgddiiitgq dygrlasagq
      181 wdykyltemg ngndtlivga snsnlnvimf ndgsiaavkk dgaqlgsvip fdsaydtadg
      241 ghisgttidm gsgndtvlal ghenggtaii nstiklgagn dtiqingdvk ggyspsvitg
      301 dagmdtliis ngsvysehfs gfenielgsk gevkivaadl vgkdsnsiqg gmlkitgnsd
      361 skvdldgsdw ikgeiknegd itynvythas apnisvlied kitqvi
//
LOCUS       WP_235170947             226 aa            linear   BCT 02-MAR-2025
DEFINITION  prophage tail fiber N-terminal domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_235170947
VERSION     WP_235170947.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019996.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08400.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>226
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
     Region          2..>90
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
     Region          <129..>183
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          188..224
                     /region_name="Phage_fiber_2"
                     /note="Phage tail fibre repeat; pfam03406"
                     /db_xref="CDD:427282"
ORIGIN      
        1 mlkdgtgkpv pgctielkar rttetvivtt vaygqpgetg sysmdvepgl yrvtlntegy
       61 apsyvgdilv kadsapgtln kflmdledaq yypkalaele avaaeilkra easaasaeea
      121 kkraenargp kgdkgdtgpq gipgpkgdtg ergpkgerge tgpqglqgvk gergekgekg
      181 epggpdatta qkgivqlssa tdsddetkaa tpkavkaamd kadgcl
//
LOCUS       WP_235170969             565 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Rhodococcus erythropolis].
ACCESSION   WP_235170969
VERSION     WP_235170969.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 565)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..565
                     /product="AMP-binding protein"
                     /calculated_mol_wt=61429
     Region          5..565
                     /region_name="PRK06178"
                     /note="acyl-CoA synthetase; Validated"
                     /db_xref="CDD:235724"
ORIGIN      
        1 maeqdvleaa laeisalqqa hwpagiprav eypleggglv dylrhwaver pdtpaivfyg
       61 rvvtyseyde lsdrfagwll slgvergdrv gvhlvncpqf hiamlgilkv gavhvpinpl
      121 frehelihel ndagvtvllt qntfsklvkk irsqtplehv aktavsdmlt aiptvelpfe
      181 vddprlsdwq siitseratp vateldslaa lnytggttgm pkgcehtqrh mvytaatatl
      241 aggdqvganp pvslvflpif wiagedfgil vplvnggtvv llnrwdaett ldavetygvt
      301 slvgtvdnyv elmdtsgfse rnlstlqnam avsfvlkldp atrqrwreat ggvlreasyg
      361 mtethtadti tlgfqdgdyd lksepvfcgi pvpgtdvliv dhdgrpvpvg ehgqiivrsp
      421 silsayyrne aatadairdg wlqtgdvgkf sergglhyla rnkemiktng msvfpsevea
      481 llmlhpaiek aavvpkpdqd kgqvafafvq lvegsdtaad eivswakenm atykvpevev
      541 lealpmtatg kvrkgdlfer tqgek
//
LOCUS       WP_235170979             320 aa            linear   BCT 02-MAR-2025
DEFINITION  AIDA repeat-containing protein, partial [Escherichia coli].
ACCESSION   WP_235170979
VERSION     WP_235170979.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 320)
  AUTHORS   Selkrig,J., Mosbahi,K., Webb,C.T., Belousoff,M.J., Perry,A.J.,
            Wells,T.J., Morris,F., Leyton,D.L., Totsika,M., Phan,M.D.,
            Celik,N., Kelly,M., Oates,C., Hartland,E.L., Robins-Browne,R.M.,
            Ramarathinam,S.H., Purcell,A.W., Schembri,M.A., Strugnell,R.A.,
            Henderson,I.R., Walker,D. and Lithgow,T.
  TITLE     Discovery of an archetypal protein transport system in bacterial
            outer membranes
  JOURNAL   Nat Struct Mol Biol 19 (5), 506-510,S1 (2012)
   PUBMED   22466966
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 320)
  AUTHORS   Fang,Y., Ngeleka,M., Middleton,D.M. and Simko,E.
  TITLE     Characterization and immuno-detection of AIDA-I adhesin isolated
            from porcine Escherichia coli
  JOURNAL   Vet Microbiol 109 (1-2), 65-73 (2005)
   PUBMED   15950405
REFERENCE   3  (residues 1 to 320)
  AUTHORS   Sherlock,O., Schembri,M.A., Reisner,A. and Klemm,P.
  TITLE     Novel roles for the AIDA adhesin from diarrheagenic Escherichia
            coli: cell aggregation and biofilm formation
  JOURNAL   J Bacteriol 186 (23), 8058-8065 (2004)
   PUBMED   15547278
REFERENCE   4  (residues 1 to 320)
  AUTHORS   Farthing,M.J.
  TITLE     Bugs and the gut: an unstable marriage
  JOURNAL   Best Pract Res Clin Gastroenterol 18 (2), 233-239 (2004)
   PUBMED   15123066
REFERENCE   5  (residues 1 to 320)
  AUTHORS   Benz,I. and Schmidt,M.A.
  TITLE     AIDA-I, the adhesin involved in diffuse adherence of the
            diarrhoeagenic Escherichia coli strain 2787 (O126:H27), is
            synthesized via a precursor molecule
  JOURNAL   Mol Microbiol 6 (11), 1539-1546 (1992)
   PUBMED   1625582
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027494.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16168.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>320
                     /product="AIDA repeat-containing protein"
     Region          <2..>320
                     /region_name="auto_Ag43"
                     /note="Ag43/Cah family autotransporter adhesin; NF033177"
                     /db_xref="CDD:467980"
     Region          115..301
                     /region_name="PL2_Passenger_AT"
                     /note="Pertactin-like passenger domains (virulence
                     factors), C-terminal, subgroup 2, of autotransporter
                     proteins of the type V secretion system of Gram-negative
                     bacteria. This subgroup includes the passenger domains of
                     the nonprotease autotransporters, Ag43; cd01344"
                     /db_xref="CDD:238654"
ORIGIN      
        1 tafrigggqa dalmlekgss ftlnagdtat dttvngglft arggtlagtt tlnngatltl
       61 sgktvnndtl tiregdallq ggaltgngrv eksgsgtltv snttltqktv nlnegtltln
      121 dstvttdvia qrgtalkltg stvlngaidp tnvtltsgat wnipdnatvq svvddlshag
      181 qihftsartg kfvpatlqvk nlngqngtis lrvrpdiaqn nadrlvidgg ratgktilnl
      241 vnagnsgtgl attgkgiqvv eaingattee gafvqgnrlq agafnytlnr dsdeswylrs
      301 eeryraevpl yasmltqamd
//
LOCUS       WP_235170987             291 aa            linear   BCT 02-MAR-2025
DEFINITION  MaoC/PaaZ C-terminal domain-containing protein [Rhodococcus
            erythropolis].
ACCESSION   WP_235170987
VERSION     WP_235170987.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 291)
  AUTHORS   Fukui,T., Shiomi,N. and Doi,Y.
  TITLE     Expression and characterization of (R)-specific enoyl coenzyme A
            hydratase involved in polyhydroxyalkanoate biosynthesis by
            Aeromonas caviae
  JOURNAL   J Bacteriol 180 (3), 667-673 (1998)
   PUBMED   9457873
REFERENCE   2  (residues 1 to 291)
  AUTHORS   Steinebach,V., Benen,J.A., Bader,R., Postma,P.W., De Vries,S. and
            Duine,J.A.
  TITLE     Cloning of the maoA gene that encodes aromatic amine oxidase of
            Escherichia coli W3350 and characterization of the overexpressed
            enzyme
  JOURNAL   Eur J Biochem 237 (3), 584-591 (1996)
   PUBMED   8647101
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013722.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01575.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..291
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /calculated_mol_wt=31506
     Region          18..135
                     /region_name="hot_dog"
                     /note="The hotdog fold was initially identified in the E.
                     coli FabA (beta-hydroxydecanoyl-acyl carrier protein
                     (ACP)-dehydratase) structure and subsequently in 4HBT
                     (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A
                     number of other seemingly unrelated...; cl00509"
                     /db_xref="CDD:469797"
     Region          164..289
                     /region_name="hot_dog"
                     /note="The hotdog fold was initially identified in the E.
                     coli FabA (beta-hydroxydecanoyl-acyl carrier protein
                     (ACP)-dehydratase) structure and subsequently in 4HBT
                     (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A
                     number of other seemingly unrelated...; cl00509"
                     /db_xref="CDD:469797"
     Site            order(212..213,243..246)
                     /site_type="active"
                     /note="active site 2 [active]"
                     /db_xref="CDD:239524"
     Site            order(218,221..222,225,235..237)
                     /site_type="active"
                     /note="active site 1 [active]"
                     /db_xref="CDD:239524"
ORIGIN      
        1 mttpkinave fdtsgldvwt dpehfevtae riaeyaaatn dpierhlkge iappvfavvp
       61 vfmsmapaal svapvellmk lvhgeqdflf hrpiypgdhl varakpigfe grdngstvvi
      121 yietktgkge lvneqwmtaf frkvdagpgl gekapehrfd dalragspaa vvnqhidedq
      181 tfryspasgd pmpihldeei armsglpgii nhglctmaft swgaltelag geterlrrla
      241 vrfakpvlpt qdietvfyks gsadgatsys yetsavgdlv ikdglaviad k
//
LOCUS       WP_235170932             311 aa            linear   BCT 02-MAR-2025
DEFINITION  replication initiation protein [Escherichia coli].
ACCESSION   WP_235170932
VERSION     WP_235170932.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 311)
  AUTHORS   Giraldo,R. and Diaz-Orejas,R.
  TITLE     Similarities between the DNA replication initiators of
            Gram-negative bacteria plasmids (RepA) and eukaryotes
            (Orc4p)/archaea (Cdc6p)
  JOURNAL   Proc Natl Acad Sci U S A 98 (9), 4938-4943 (2001)
   PUBMED   11296251
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015076.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03090.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..311
                     /product="replication initiation protein"
                     /calculated_mol_wt=34929
     Region          26..153
                     /region_name="Replicase"
                     /note="Replicase family; pfam03090"
                     /db_xref="CDD:427129"
     Region          166..238
                     /region_name="PriCT_1"
                     /note="Primase C terminal 1 (PriCT-1); smart00942"
                     /db_xref="CDD:214926"
     Region          287..>311
                     /region_name="VC1465_fam"
                     /note="VC1465 family Xer recombination activation factor;
                     NF040522"
                     /db_xref="CDD:439737"
ORIGIN      
        1 msaalqyfde nlphrpyhtd dlafglrisg kgrallaryi qqnqphaqfw lvfdvdrvga
       61 aidwsdrnap apnitvknpv nghahllyal niavrtapds svkalkyaaa ierslceklc
      121 advnysglic knpfhlewqv mewreeaytl deladyldls asarrsidkh ygmgrnchlf
      181 emtrkwayra irqgwpafsq wldaviqrve mynaslpvpl sppecraigk siakythrnf
      241 tpetfaqyva tthtpeiqaa rgrkggiakg agyedkrsta lemlangctq kaiaemlgvs
      301 drsirnwksg k
//
LOCUS       WP_235170998              28 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6404 family protein, partial [Escherichia coli].
ACCESSION   WP_235170998
VERSION     WP_235170998.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 28)
  AUTHORS   Hejnova,J., Pages,D., Rusniok,C., Glaser,P., Sebo,P. and
            Buchrieser,C.
  TITLE     Specific regions of genome plasticity and genetic diversity of the
            commensal Escherichia coli A0 34/86
  JOURNAL   Int J Med Microbiol 296 (8), 541-546 (2006)
   PUBMED   17049458
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040085.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19942.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..28
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..28
                     /product="DUF6404 family protein"
     Region          <2..27
                     /region_name="DUF6404"
                     /note="Family of unknown function (DUF6404); pfam19942"
                     /db_xref="CDD:437774"
ORIGIN      
        1 ggflfglcma sfhwwrrkvn rlppwddv
//
LOCUS       WP_235171067             231 aa            linear   BCT 02-MAR-2025
DEFINITION  Imm52 family immunity protein [Rhodococcus erythropolis].
ACCESSION   WP_235171067
VERSION     WP_235171067.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 231)
  AUTHORS   Wen,H., Liu,G., Geng,Z., Zhang,H., Li,Y., She,Z. and Dong,Y.
  TITLE     Structure and SAXS studies unveiled a novel inhibition mechanism of
            the Pseudomonas aeruginosa T6SS TseT-TsiT complex
  JOURNAL   Int J Biol Macromol 188, 450-459 (2021)
   PUBMED   34371041
REFERENCE   2  (residues 1 to 231)
  AUTHORS   She,Z., Geng,Z., Xu,J.H., Li,Y.H. and Dong,Y.H.
  TITLE     Structural characterization of the Imm52 family protein TsiT in
            Pseudomonas aeruginosa
  JOURNAL   Protein Sci 28 (5), 971-975 (2019)
   PUBMED   30834616
REFERENCE   3  (residues 1 to 231)
  AUTHORS   Burkinshaw,B.J., Liang,X., Wong,M., Le,A.N.H., Lam,L. and Dong,T.G.
  TITLE     A type VI secretion system effector delivery mechanism dependent on
            PAAR and a chaperone-co-chaperone complex
  JOURNAL   Nat Microbiol 3 (5), 632-640 (2018)
   PUBMED   29632369
REFERENCE   4  (residues 1 to 231)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026917.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15579.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..231
                     /product="Imm52 family immunity protein"
                     /calculated_mol_wt=25406
ORIGIN      
        1 msffgrrptv agywgtrvqs sqevaqtmra flddletidp elalslvsta efdkvpadls
       61 vdglvrifeh srskemgysd tpgpgydidl spedgtarrv gawvgglets apnsvrvslp
      121 tekqladstr qlldpdigda imrvivkhwe perarwsigd yrhlqkrskg evevgwetyf
      181 hsgvrfdrsa lpqsavveel stgtlirlgd kpmevaaadi vavraaldyp v
//
LOCUS       WP_235171115             429 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rhodococcus erythropolis].
ACCESSION   WP_235171115
VERSION     WP_235171115.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..429
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45319
     Region          30..416
                     /region_name="2A0106"
                     /note="metabolite-proton symporter; TIGR00883"
                     /db_xref="CDD:273320"
ORIGIN      
        1 mstattptsg tvtperlaaa rkavissslg aalewfdviv yasfavviah nffpggdntl
       61 gliltfatfa isyvirplgg mvlgsyadrr grknaltltm mlmmigtlim avapttsmig
      121 pwagvvilvs rliqgfsagg efgtattflv etaphkkafh sswqvasqga svflaslfgy
      181 mlnthlshea lyswgwrvpf ffgiivgpvg lyirakldet ddfktsvpek aplkttltrh
      241 lgrvltgaav vgvatisiyl ilymptfavk nlgvsasagy lggivaglvt litvplighl
      301 adrvgparvm twasvaaivl awplfklmvd hpstltlvlv vsvlgvimaf afgplpalms
      361 slfpaeirat gmslsynlgv tllggiaplv ltwlisttgs ldapsyyymt vavlslgglw
      421 sartlfsqk
//
LOCUS       WP_235171159             588 aa            linear   BCT 02-MAR-2025
DEFINITION  cholesterol oxidase substrate-binding domain-containing protein
            [Rhodococcus erythropolis].
ACCESSION   WP_235171159
VERSION     WP_235171159.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 588)
  AUTHORS   Coulombe,R., Yue,K.Q., Ghisla,S. and Vrielink,A.
  TITLE     Oxygen access to the active site of cholesterol oxidase through a
            narrow channel is gated by an Arg-Glu pair
  JOURNAL   J Biol Chem 276 (32), 30435-30441 (2001)
   PUBMED   11397813
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020693.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09129.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..588
                     /product="cholesterol oxidase substrate-binding
                     domain-containing protein"
                     /calculated_mol_wt=63381
     Region          84..226
                     /region_name="FAD_binding_4"
                     /note="FAD binding domain; pfam01565"
                     /db_xref="CDD:426326"
     Region          268..586
                     /region_name="Chol_subst-bind"
                     /note="Cholesterol oxidase, substrate-binding; pfam09129"
                     /db_xref="CDD:401173"
ORIGIN      
        1 mvhraepkae hssgvdgvsr rgflaasaga aalagiswap agavpwgsas tiapppgfps
       61 diplsqqaya nwsreimlds vwtatarhsg dvvtlanwaf dngytvrakg tmhgwspltv
      121 vpgapsdrvl lvdtmanlns vvvqhgtpat vtagagasie ailtalereg lgwanspaig
      181 elsiagalai gahgatypav getitpgqsy gslsnlitei tvvawdegsn ryglktfrrs
      241 ddeitaflth lgrtfvtsvt lqagenyrlr cqsftdipwq elfaapgspg rtyesfveks
      301 grveaiwfpf tqtpwlkvwt ptpvkptesr evsgpynyff sdaipeevtt plgmvaqglq
      361 aatplfgasq fgavaaglvl tdtddlwgws kdvlfylrht tlrvvaggga vitkrsnigr
      421 vvhemtswln ermthyaslg qypvnmpfev rlcgvddnge vlvdsagvpd lsavrlradr
      481 qdwdtaiwmn vvsipgtagl paflremerw mvanysgdya tfrpewskgw aftdqaayqd
      541 defltstvpa tfraggdgnw dfaiatldeh dphrvfsnmf ldrvlpps
//
LOCUS       WP_235170881             153 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6301 family protein [Rhodococcus erythropolis].
ACCESSION   WP_235170881
VERSION     WP_235170881.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Chiu,H.T., Weng,C.P., Lin,Y.C. and Chen,K.H.
  TITLE     Target-specific identification and characterization of the putative
            gene cluster for brasilinolide biosynthesis revealing the
            mechanistic insights and combinatorial synthetic utility of
            2-deoxy-l-fucose biosynthetic enzymes
  JOURNAL   Org Biomol Chem 14 (6), 1988-2006 (2016)
   PUBMED   26754528
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040049.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19818.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..153
                     /product="DUF6301 family protein"
                     /calculated_mol_wt=16799
     Region          12..130
                     /region_name="DUF6301"
                     /note="Family of unknown function (DUF6301); pfam19818"
                     /db_xref="CDD:437650"
ORIGIN      
        1 mhvdiegatr iarlaaefdw twavddlepf ctqagwelve lrqgggsirt nlhvcrpkan
       61 mfgrqhrmdw isifvtdvad datpmtvvrp lrnagfanlt aaltsvlpip tysepgpeat
      121 irwdlpksgr rtrdepprdp patdesevsg mgg
//
LOCUS       WP_235171170             430 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxylesterase family protein [Rhodococcus erythropolis].
ACCESSION   WP_235171170
VERSION     WP_235171170.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012363.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00135.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..430
                     /product="carboxylesterase family protein"
                     /calculated_mol_wt=46447
     Region          1..424
                     /region_name="PnbA"
                     /note="Carboxylesterase type B [Lipid transport and
                     metabolism]; COG2272"
                     /db_xref="CDD:441873"
ORIGIN      
        1 mlssetvias tasgkirgrk hdgsyyfgai pyaragrfek prpverfsdv fdatalgtvf
       61 pqppsrleri mgpplpepel sedsftvtvt tpslngrrpv mvwlhgggys sgggslpwyd
      121 ggalsaegdv vvvsvnyrvg vlgyllldgv segnlgvhdq iaalewvren ieafggdpds
      181 vtvfgqsaga hsivnllgsn nsrtlfrrai lqstprpdln ftqaaaieng etfarlldgd
      241 prtaplshil dafrgtaief srrspnvvqp pfapiselep vtrtfdaapd vivgytrdeg
      301 saflrdvaga pdpervaeka ltqnmfaepa meladaftta gasvytyrfd waptedvfga
      361 thcielpfvl gteqswqgsp mlgssdwqsi dalgrrirrh wtsfahtgsp dnsetwekyt
      421 saqpigitfs
//
LOCUS       WP_235171194             424 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [Rhodococcus erythropolis group].
ACCESSION   WP_235171194
VERSION     WP_235171194.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis group
  ORGANISM  Rhodococcus erythropolis group
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Rhodococcus erythropolis group"
                     /db_xref="taxon:2840174"
     Protein         1..424
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=43563
     Region          31..417
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(38..39,42..43,46,78,129..130,132..134,137,162,
                     165..166,169,245,248..249,252..254,257,285,289,341..342,
                     346,350,366,369..370,373..374,377)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mstqtmgagt aavprldsar adggkwlwlt vaasmfaaaw ggneftpllv myrldhgysp
       61 vmvdfflfay vvgivpalll ggplsdrlgr rpimlpapii aiagstllaf gadsaavlil
      121 grilcgialg igmavggswv kelstqpwds aasegagarr aamsltagfa lgagaagila
      181 qwapmpsala yvlhivitvv agvalwrape trpaqekser rrliddlkip saghrrflyv
      241 vvplapwvfg aasvayavip slmtghsgda pvafsallcm valtcgfaiq slgrkidtdr
      301 sargalvalv flvvgmaaaa lvastltvav aivaaailgc gygmalvsgl leiqriagpd
      361 dlagltavfy sityigfavp allamlsesi palsytvtll fgsvaaaacl vlilfksrsh
      421 lpal
//
LOCUS       WP_235171197             243 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Rhodococcus erythropolis].
ACCESSION   WP_235171197
VERSION     WP_235171197.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..243
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=25158
     Region          26..242
                     /region_name="PRK07041"
                     /note="SDR family oxidoreductase"
                     /db_xref="CDD:235914"
ORIGIN      
        1 mtttlsllsg ktvvligggt giglrvaqla vdagaqvvlg grtaskleaa asqlgeaahw
       61 ftvdtsddds vtafftnips vdalfttaad yqvgsfreqs vedaaspfts kfwgqyrvvh
      121 aaldkltpta svvlmsgaas vrppaaaaay vaanaaiegl grglavelsp irvntvapgt
      181 idghlwaqrp aevreaaftw saennvlgrv gnedeiaqav fylftntytt gstlypdggy
      241 alr
//
LOCUS       WP_235171231             597 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: alpha/beta fold hydrolase [Rhodococcus].
ACCESSION   WP_235171231
VERSION     WP_235171231.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus
  ORGANISM  Rhodococcus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12697.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Rhodococcus"
                     /db_xref="taxon:1827"
     Protein         1..597
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=63633
     Region          11..267
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(14,16..17,19,38..40,89..91,129..131,159,163,
                     186..189)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187573"
     Site            order(106,131,159,163)
                     /site_type="active"
                     /db_xref="CDD:187573"
     Region          352..597
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
ORIGIN      
        1 mtprdvprha lifgasglvg rhlvltlaea gtnvtaavrt aesgarverw vrehgltrsi
       61 sttivdfdap eivaggpsaf pfiteihnca gsyrfgmtaq earsanvgiv eklidfakdl
      121 pnlqrvihvs gyrvggqdpt tvpwpddhrt avykdlgaye askvesdaif qaralkhgvp
      181 wtivnpssvi gdsatgesdq higlastveq iwngtaaalp gnestflpiv tvdylaafmt
      241 aaavdpaaeg maywvlhddt ppladllthv grhlgakvpr vripigvikr lpqqitkadp
      301 etltfmsadr yptesavefa drhgilmpdv lvslerwady laahrfgavm sadrrfvdvg
      361 glrtfelgvr gssrvilpgm pvnadtwaev aagiegrvvd lpglglssga gvqdwdewlp
      421 avvagepadl vghsigaaaa vvaadrfpaq vksltliapf flqapmgssa rlkplvrayl
      481 rhadparlsr kltgseasad slvsslsdle rsssksvadh lararskrwr aelqealrrf
      541 sgpvriitgs kdpidpaava qleslpnikl islpgaghhp qlthtdalvd llegsla
//
LOCUS       WP_235171240             359 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6779 domain-containing protein [Rhodococcus erythropolis].
ACCESSION   WP_235171240
VERSION     WP_235171240.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042604.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20570.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..359
                     /product="DUF6779 domain-containing protein"
                     /calculated_mol_wt=38212
     Region          45..152
                     /region_name="DUF6779"
                     /note="Domain of unknown function (DUF6779); pfam20570"
                     /db_xref="CDD:466719"
ORIGIN      
        1 mtnsgrsksa rrskrsasqm iiaallalav iaslflifsn svqllrvglv valwaatlga
       61 iamtkyrres aldkakvadl qtvyelqler eisarreyel svegrvrrev tadaeelagl
      121 raelvalrrn lealfeggll peqtalktds trvpelggss ygayqpapsg lyvpgagqsg
      181 psqptpnvgg laspnddpvt aettvvfaet swrdssfvap rviptqksqe tqkpqsgnqa
      241 psspvsssps rtvkdvpvkk dpepvapvep evkapaqapk iedaviedav veevhevvae
      301 gepepaaepd aeprrrrraa pedaasgahs ngltvaeima nlssnnpseg sgrrrrred
//
LOCUS       WP_235171280             285 aa            linear   BCT 02-MAR-2025
DEFINITION  MaoC/PaaZ C-terminal domain-containing protein [Rhodococcus
            erythropolis].
ACCESSION   WP_235171280
VERSION     WP_235171280.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 285)
  AUTHORS   Fukui,T., Shiomi,N. and Doi,Y.
  TITLE     Expression and characterization of (R)-specific enoyl coenzyme A
            hydratase involved in polyhydroxyalkanoate biosynthesis by
            Aeromonas caviae
  JOURNAL   J Bacteriol 180 (3), 667-673 (1998)
   PUBMED   9457873
REFERENCE   2  (residues 1 to 285)
  AUTHORS   Steinebach,V., Benen,J.A., Bader,R., Postma,P.W., De Vries,S. and
            Duine,J.A.
  TITLE     Cloning of the maoA gene that encodes aromatic amine oxidase of
            Escherichia coli W3350 and characterization of the overexpressed
            enzyme
  JOURNAL   Eur J Biochem 237 (3), 584-591 (1996)
   PUBMED   8647101
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013722.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01575.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..285
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /calculated_mol_wt=30292
     Region          2..282
                     /region_name="PLN02864"
                     /note="enoyl-CoA hydratase"
                     /db_xref="CDD:178455"
ORIGIN      
        1 mpidpkialg aelapqefsw tpsdvqhyhl algagarpld pselryldde kpqvlptfat
       61 vaanfhatea pkvsfpgvei dlakvvhgsq evtvhqpipa sgsgrttpri aevwdkgkaa
      121 vivqesvtvd aegnplwtar ssifargegg fggergpses islpdrepde tvvtpvlpqq
      181 allyrmcgdr nplhsdpqfa saagfpapil hglctygmvc ktavdtmldg dssrvagfra
      241 rfagvvfpge nlsiqiwkdn grllisasvl ereapaladv vltlv
//
LOCUS       WP_235171322             473 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase [Rhodococcus erythropolis].
ACCESSION   WP_235171322
VERSION     WP_235171322.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 473)
  AUTHORS   Zheng,M., Ginalski,K., Rychlewski,L. and Grishin,N.V.
  TITLE     Protein domain of unknown function DUF1023 is an alpha/beta
            hydrolase
  JOURNAL   Proteins 59 (1), 1-6 (2005)
   PUBMED   15688435
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018018.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06259.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..473
                     /product="alpha/beta hydrolase"
                     /calculated_mol_wt=51201
     Region          227..410
                     /region_name="Abhydrolase_8"
                     /note="Alpha/beta hydrolase; pfam06259"
                     /db_xref="CDD:283837"
ORIGIN      
        1 mdltdidvwd vealdqlsag legvlvahrv rdirrrlttl rkeavaddlh irqdgtvsav
       61 apiadghplh vhaqllevav religeallv sadlhhalsl rsqvgtdlrd kavrvgeewr
      121 afspdrqrqm lrhapdlian ldgipaalrs panldriqte rarlqddsvr isqelhreff
      181 ggrlsntgag qwyaerkled ldaldelfha epcrrlllmd mhsgergfaa iaigdpdtad
      241 hisvtipgln tnvkdsmrgm vgeatrlrae amrqlelagr resvatiawi gydapqvigp
      301 gkfdigrasf dvsrsskagi aadalgsffh glraasvndr vhitvlghsy gslatslalq
      361 rgasaavddv vfygspgvra kvesdlgiad rhvyvmkaeg dsiagfgrfg gdptrtefhr
      421 lstaegvtpd gvkherafgh aeyartgdng elrmsgynla vvvaglpela vma
//
LOCUS       WP_235171352             297 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase [Rhodococcus erythropolis].
ACCESSION   WP_235171352
VERSION     WP_235171352.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 297)
  AUTHORS   Urbach,C., Evrard,C., Pudzaitis,V., Fastrez,J., Soumillion,P. and
            Declercq,J.P.
  TITLE     Structure of PBP-A from Thermosynechococcus elongatus, a
            penicillin-binding protein closely related to class A
            beta-lactamases
  JOURNAL   J Mol Biol 386 (1), 109-120 (2009)
   PUBMED   19100272
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024748.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13354.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..297
                     /product="serine hydrolase"
                     /GO_function="GO:0008800 - beta-lactamase activity
                     [Evidence IEA]"
                     /GO_process="GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=31764
     Region          2..295
                     /region_name="PenP"
                     /note="Beta-lactamase class A [Defense mechanisms];
                     COG2367"
                     /db_xref="CDD:441934"
ORIGIN      
        1 mtetatyves aqqeiaavla eaktdafvha rdidsgeefg ygadegvila svfkipvvlq
       61 yarevaagtl dptehatvta efrsggigig gcaddvtasw rdlallmmsf sdnaatdfly
      121 erlgldniva tlrglglekt nlvrdcrglf ktvyddlgvd kgtllemppi eilrtisvmd
      181 parsnsstpr eitmllaaiw kdeagpasac eevrtimskq vwphrlssgf pdevtvaakt
      241 gtlglvrnea gvvaypdgkr yavgvftksh elthrapkid asigtvgria vealrns
//
LOCUS       WP_235171366            1122 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: serine hydrolase [Rhodococcus].
ACCESSION   WP_235171366
VERSION     WP_235171366.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus
  ORGANISM  Rhodococcus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012371.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00144.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Rhodococcus"
                     /db_xref="taxon:1827"
     Protein         1..1122
                     /product="serine hydrolase"
                     /calculated_mol_wt=118952
     Region          29..206
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
     Region          161..330
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
     Region          398..649
                     /region_name="DAP2"
                     /note="Dipeptidyl aminopeptidase/acylaminoacyl peptidase
                     [Amino acid transport and metabolism]; COG1506"
                     /db_xref="CDD:441115"
     Region          650..1010
                     /region_name="AmpC"
                     /note="CubicO group peptidase, beta-lactamase class C
                     family [Defense mechanisms]; COG1680"
                     /db_xref="CDD:441286"
ORIGIN      
        1 mtdrpfvldd lhrvvtptet alspdgtvvv fvrseivagk attslwaisr gsqarrlttg
       61 padsaprfsp dgtsiaflrk vgdsaqlhli pltggeaetl ttaaslplga gaaawspdgk
      121 aiafaavvsr sdstdpnapi vtdrlgykvd gagwlgtfrr hlhtvdletk avrrltdgdw
      181 nadvpswspd gtalaftanl epdsdlnltf sayrilvddl svppqrlgha tgvqgstlwh
      241 pngdsvvaig tpevrvgtad lirlsvpgpt etpvdvtlta hldrnvmpga pgypggtpal
      301 sntrdeivfc lrdrgwthly aadietgtsr slvanpnevv salsvardar vasviittqq
      361 sfgevalvdl dsgdvttlte ftaealpevt lfaaeereft isdgrtvhgw llsapetsga
      421 apllldihgg phnawtgvad tyhpahqvla aqgwriltln prgsdgygad fmyavngawg
      481 tsdqadflep idalvaeglv dgdrlaitgy syggystchl tsatdrfaaa vagglicdfn
      541 amagvcdfgp hlaslatgtt vpensaglla asplaavknv vtptlilhgk sdercplgqa
      601 eawfaalrqq hvptrlvayp gashgflvng sishridyst rliewvkryt saklpktgla
      661 nasagadawk rsldvlcery gvtgaqfgil tldsngkeit rttvasgvin adtgvevstd
      721 slfqigsitk vwtamlvmql vdeglldlda tvrsilpdfa lqdeetaari tvrallnhrn
      781 gidgdlfidk grgddvvery veglrdfrqv hpledgfays nsayvlaari vevlrggiwd
      841 dilkeriidp lglahtltlt gdtprysvaa ghtgnsvvmp vwpitrsmgp agcitasigd
      901 lltfaelgll egqsvdgvri vseksaaamr tpeidiself pdksgwglgw fhetwsgeei
      961 fghdgstigq haylrifprh nvaialltsg gkadglyrdl fteaaaalvg leppqalapn
     1021 pasvesipds vlgkyssggi aiefrrgesa deavitvigd vipnpeedet apkkpatvat
     1081 lvpsqipgtw ttrqpgaagw ttvrphrdgv yvgfrflprv na
//
LOCUS       WP_235171459             443 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [Rhodococcus].
ACCESSION   WP_235171459
VERSION     WP_235171459.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus
  ORGANISM  Rhodococcus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Rhodococcus"
                     /db_xref="taxon:1827"
     Protein         1..443
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=46439
     Region          17..429
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(30..31,34..35,38,78,136..137,139..141,144,164,
                     167..168,171,259,262..263,266..268,271,299,303,357..358,
                     362,366,382,385..386,389..390,393)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mgitvqtrnd gaqlkrrral vagsvgnfie wyefgvygff atiiasnffs adgsgdlesl
       61 iktyasfala fffrpvgaal fgrlgdrigr rptlvivlll msgattligv lptyesvgil
      121 apllltvlri lqglsaggef ggavsvmtef appgrrglyg swqsftvalg llagagiaal
      181 latvldsgql sdwgwripfl lalpmglval wlrlrleetp sferarsvqs eptaetavpi
      241 vqpsvgetar aillgigrlm gwsaagytfl vvmptylqss lnatfhqalv asvlanagfa
      301 vtipiaggls drigrravml tgtviilvla lpllnvlqne qtsltakgfa vfaagaavgl
      361 vagpgpamls emfptsvryt glglayslsn avfsgcagli itwliketsn ldipayfvma
      421 tcavsaials tlrgnahkra lvd
//
LOCUS       WP_235171477             490 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rhodococcus erythropolis].
ACCESSION   WP_235171477
VERSION     WP_235171477.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..490
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=49877
     Region          26..462
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(33..34,37..38,41,73,123..124,126..128,131,210,
                     213..214,217,280,283..284,287..289,292,327,331,381..382,
                     386,390,406,409..410,413..414,417)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mtepnvqsss visprqaggl aavgflafse vtsgmlqswy iplipkigqr ldvnpaqlnw
       61 vlaayllstv icvpllaklg dkyghrrmvm vvlgsvalgt iltatapsfg ifllgraiqg
      121 tlgallplel ailreragas sgraigilvg clgaggaagt llvgllgtna sltlvlfvpa
      181 alvlaslati alfvpetstr atgsidwtga allgiglaif lvgisngskl gwtsattlma
      241 vggglallaa fvalekkist plvdltlltk ggvgfllglt slfglqfyga atvsalyfas
      301 kpevagygfg ldsmgialai tpvpiavmia ssladsvaqr fgtrttlqms ailistwfag
      361 livfrdtlsg fiamglvggt giglfvallp alvisrarpe dsaiagalyn tsrtvagava
      421 gavftaimsg mlisgsklpt esafvaiwav cigvgvlifv lapflnklgg kayqpetieq
      481 lvhlpvress
//
LOCUS       WP_235171478              89 aa            linear   BCT 02-MAR-2025
DEFINITION  WS/DGAT domain-containing protein [Rhodococcus erythropolis].
ACCESSION   WP_235171478
VERSION     WP_235171478.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 89)
  AUTHORS   Petronikolou,N. and Nair,S.K.
  TITLE     Structural and Biochemical Studies of a Biocatalyst for the
            Enzymatic Production of Wax Esters
  JOURNAL   ACS Catal 8 (7), 6334-6344 (2018)
   PUBMED   31559109
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018657.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06974.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..89
                     /product="WS/DGAT domain-containing protein"
                     /GO_function="GO:0004144 - diacylglycerol
                     O-acyltransferase activity [Evidence IEA]"
                     /calculated_mol_wt=9207
     Region          <18..84
                     /region_name="WS_DGAT_C"
                     /note="WS/DGAT C-terminal domain; pfam06974"
                     /db_xref="CDD:462057"
ORIGIN      
        1 maettrdvpi spvdavhgph gplaldgaal velwplgpla gnvrvgftaa syneyfwigi
       61 qadaehlppa skiahavera ldeiastai
//
LOCUS       WP_235171528             811 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Rhodococcus
            erythropolis].
ACCESSION   WP_235171528
VERSION     WP_235171528.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..811
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=85394
     Region          23..807
                     /region_name="reg_ATPase_IniR"
                     /note="isoniazid response ATPase/transcriptional regulator
                     IniR; NF038181"
                     /db_xref="CDD:468399"
ORIGIN      
        1 mnrdsgaess yiagllrgid ltasplrlfv tgtdasarpq vtravrkrie sgdkpvvtav
       61 tldapvdaiv viadaqalts deiralnelv hrddlgvvia sdridpplap iysnissfgt
      121 vlhlnplnrs dirkiaaerr vplddravla lehlaggsfg aveayfaaas agrpematav
      181 rthilhqvta lhpiereile vslavpdida feldlgqekf sltaafdral atglfgsrsp
      241 lvasvlaest starirseli rivesrahar tldvdtarkl fdsgirhrdl tavlrdavdg
      301 stpavaadll rrvnsiealg ladtllyaqv sarsgdldta crladsviae pdpgnaqlaa
      361 avriraassa acgqlgaaad lytwlgpert gtespfaait flgigkvdda naaltgitgs
      421 pssstvgaat langlmqsvt gvaptalntm sralslpgga dtsafqpdsa palvalallh
      481 ngaheraatv vsaaiaavda sshtwarlhi lrawiamvrg qdavleglpd evvrgplrer
      541 dslflhaliv glarrtgdla qlrrawsgaa galsscsvdl fnllpvgelw laavrldete
      601 qvehlvddar sllralgepp lwssplhwyg vqasilaqsp adllphahal aesakthtya
      661 aglatagrqw llllqgsvda ddveaaartl sriglpwdaa rlageaalrt pdtksatall
      721 hvarslrtas taetngtdsa dnaappsvlt ereqevaelv vvgltyreig erlyisaktv
      781 ehhvarikrr vgaqsrsell tilrsmtpan k
//
LOCUS       WP_235171575             369 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Rhodococcus erythropolis].
ACCESSION   WP_235171575
VERSION     WP_235171575.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 369)
  AUTHORS   Todone,F., Vanoni,M.A., Mozzarelli,A., Bolognesi,M., Coda,A.,
            Curti,B. and Mattevi,A.
  TITLE     Active site plasticity in D-amino acid oxidase: a crystallographic
            analysis
  JOURNAL   Biochemistry 36 (19), 5853-5860 (1997)
   PUBMED   9153426
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013434.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01266.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..369
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=38655
     Region          2..358
                     /region_name="solA"
                     /note="N-methyl-L-tryptophan oxidase; PRK11259"
                     /db_xref="CDD:236887"
ORIGIN      
        1 mseildvivi ggglvgssaa wrlaargrsv vqleqfgpgh khgashgtsr iyrqaydnhl
       61 ytglaadalp lwreleattd igfleltgav dhglpqavqs kaqillgagi kgeiltpaea
      121 sarwpglrfd ttvlhhpdag rlhadravta lkagavfaga evrhdvrvla larasygvdv
      181 vtdggtlaar qvviaagawt edliadsglg seivlptlrt tqeqpahfap ldpgvewpsf
      241 vhhtgaqlet agiyglgseg gikigehatg pvvtpqtrdy tpdsageqrl veyaeswlpg
      301 vdstrvesit clytstpdsn fvvdrvgavt vaagfsghgf kfgpalgelv sdlvdgttla
      361 pevfrlger
//
LOCUS       WP_235171626             190 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2231 domain-containing protein [Rhodococcus erythropolis].
ACCESSION   WP_235171626
VERSION     WP_235171626.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021505.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09990.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..190
                     /product="DUF2231 domain-containing protein"
                     /calculated_mol_wt=19839
     Region          44..>138
                     /region_name="DUF2231"
                     /note="Predicted membrane protein (DUF2231); cl01730"
                     /db_xref="CDD:470316"
ORIGIN      
        1 mdigtlyrgi esargldgps tglrrrilei tersdrsrti aallrgaavg hplhpalvav
       61 pagawtasli fdtvlrdpkt arrlvglgli stppvlltgw ldwsergdva rrvglvhaas
      121 navgiwsfaa syrlrgkdsl alarvfsvlg laavgvggal gghivfklmd dpaveaaatp
      181 vldpildvvn
//
LOCUS       WP_235171610             268 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Rhodococcus
            erythropolis].
ACCESSION   WP_235171610
VERSION     WP_235171610.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 268)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 268)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..268
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=27772
     Region          18..244
                     /region_name="PRK05872"
                     /note="short chain dehydrogenase; Provisional"
                     /db_xref="CDD:235633"
ORIGIN      
        1 mgkseagkae sgkssgddlt grrilitgaa rnigsslarr lydrgasvgl lglepelleq
       61 vatscgrapw qlcdvadpeq vsrgvdyiae klggidvvva nagveanssi lggdvedmrr
      121 avevnlmgty ftlraagphi shengyalvv asahgaakhp frgpfgasra gvealgdalr
      181 lemkhlgtkv gvayigdidt dttalsfdga rgtlasagtt tvadavdafe rgivgrksrv
      241 haprrsaavr hiaqraidlr pshirgva
//
LOCUS       WP_235171638             334 aa            linear   BCT 02-MAR-2025
DEFINITION  tocopherol cyclase family protein [Rhodococcus erythropolis].
ACCESSION   WP_235171638
VERSION     WP_235171638.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 334)
  AUTHORS   Porfirova,S., Bergmuller,E., Tropf,S., Lemke,R. and Dormann,P.
  TITLE     Isolation of an Arabidopsis mutant lacking vitamin E and
            identification of a cyclase essential for all tocopherol
            biosynthesis
  JOURNAL   Proc Natl Acad Sci U S A 99 (19), 12495-12500 (2002)
   PUBMED   12213958
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025608.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14249.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..334
                     /product="tocopherol cyclase family protein"
                     /GO_function="GO:0009976 - tocopherol cyclase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=36342
     Region          <131..316
                     /region_name="Tocopherol_cycl"
                     /note="Tocopherol cyclase; cl14571"
                     /db_xref="CDD:472689"
ORIGIN      
        1 mklpayrasg atlpygnlla shdvamegyf wrftmpasgr vvialagink sdsgnwstlg
       61 laahpggflr taehpsgsad phtlgayadn vfrgnadrlq vdfgdshldv risnqrfwph
      121 hrfggssyfq svpalnqywh pwllggrveg savidgqrwd ltgaqvygek nwgkggfpes
      181 wwwgqaqgft dpracvafag gqvsagplrt evtavvaalp dgtvlrlgnp ltsqvettvs
      241 ddrwtirgys rkwsvdidgt apiadahilp vpipaerrnv pgalehlggt msvivrrrgt
      301 ivwkdrsrla alehggldra qaeltrreql sqdr
//
LOCUS       WP_235171780             180 aa            linear   BCT 02-MAR-2025
DEFINITION  holin [Rhodococcus erythropolis].
ACCESSION   WP_235171780
VERSION     WP_235171780.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 180)
  AUTHORS   van Sinderen,D., Karsens,H., Kok,J., Terpstra,P., Ruiters,M.H.,
            Venema,G. and Nauta,A.
  TITLE     Sequence analysis and molecular characterization of the temperate
            lactococcal bacteriophage r1t
  JOURNAL   Mol Microbiol 19 (6), 1343-1355 (1996)
   PUBMED   8730875
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028255.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16945.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..180
                     /product="holin"
                     /calculated_mol_wt=18362
     Region          83..152
                     /region_name="Phage_r1t_holin"
                     /note="Putative lactococcus lactis phage r1t holin;
                     pfam16945"
                     /db_xref="CDD:407168"
ORIGIN      
        1 maesdntitv gvelvgansi dskafwldll drtgktfiqt lliflaggat ivsvswvtal
       61 ssaalaalvs flialststa ltsgnflidt vdrvgrtfvs alvgaipatg tlsdinwrda
      121 ltlaataali svltslassn fgptkglpsl apvkpdlial dpienaddie ydgdggsyls
//
LOCUS       WP_235171378             280 aa            linear   BCT 02-MAR-2025
DEFINITION  sucrase ferredoxin [Rhodococcus erythropolis].
ACCESSION   WP_235171378
VERSION     WP_235171378.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 280)
  AUTHORS   Machray,G.C., Burch,L., Hedley,P.E., Davies,H.V. and Waugh,R.
  TITLE     Characterisation of a complementary DNA encoding a novel plant
            enzyme with sucrolytic activity
  JOURNAL   FEBS Lett 354 (1), 123-127 (1994)
   PUBMED   7957893
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06999.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..280
                     /product="sucrase ferredoxin"
                     /calculated_mol_wt=30422
     Region          1..277
                     /region_name="COG4759"
                     /note="Uncharacterized conserved protein, contains
                     thioredoxin-like domain [General function prediction
                     only]"
                     /db_xref="CDD:443792"
ORIGIN      
        1 mvgragtthl wvliehpgpw pasapddvlp valtekiyaa qgrirlvvir rprnrrvltp
       61 tcvlawtdgt rqwmregsvd ryedlsvlpf esmaagvepd fgrsrteplf avcthgkkda
      121 ccaelgrpvv saldvagiad vwecshiggd rfaanmiawp aavyfsrldg dsatdaveky
      181 lngelaathl rgraalsqaa qaaehavrra tdivatdale sitesvdggr ttvdlrleer
      241 dfrvvvrpgp pgqpfrhdcg sggtvewsgw tvehlleqph
//
LOCUS       WP_235171800             483 aa            linear   BCT 02-MAR-2025
DEFINITION  phage portal protein [Rhodococcus erythropolis].
ACCESSION   WP_235171800
VERSION     WP_235171800.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 483)
  AUTHORS   Chaban,Y., Lurz,R., Brasiles,S., Cornilleau,C., Karreman,M.,
            Zinn-Justin,S., Tavares,P. and Orlova,E.V.
  TITLE     Structural rearrangements in the phage head-to-tail interface
            during assembly and infection
  JOURNAL   Proc Natl Acad Sci U S A 112 (22), 7009-7014 (2015)
   PUBMED   25991862
REFERENCE   2  (residues 1 to 483)
  AUTHORS   Lebedev,A.A., Krause,M.H., Isidro,A.L., Vagin,A.A., Orlova,E.V.,
            Turner,J., Dodson,E.J., Tavares,P. and Antson,A.A.
  TITLE     Structural framework for DNA translocation via the viral portal
            protein
  JOURNAL   EMBO J 26 (7), 1984-1994 (2007)
   PUBMED   17363899
REFERENCE   3  (residues 1 to 483)
  AUTHORS   Lurz,R., Orlova,E.V., Gunther,D., Dube,P., Droge,A., Weise,F., van
            Heel,M. and Tavares,P.
  TITLE     Structural organisation of the head-to-tail interface of a
            bacterial virus
  JOURNAL   J Mol Biol 310 (5), 1027-1037 (2001)
   PUBMED   11501993
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016988.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05133.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..483
                     /product="phage portal protein"
                     /calculated_mol_wt=53172
     Region          35..466
                     /region_name="Phage_prot_Gp6"
                     /note="Phage portal protein, SPP1 Gp6-like; cl19531"
                     /db_xref="CDD:418597"
ORIGIN      
        1 mnvtaqtlvt dqgsterdyl ieglaklada tpvrikrqda yegrhdlpfa pegssteyma
       61 lrqmaplpli rlavrtacqr lraggvrtsk gqefdrdlwr iwdrnnlgsr qripytdglv
      121 hdcgimsvwp nkadkttpii rpespasvhv esdpadpfrs iwavktwver rnkkeitvam
      181 lylpkeviry egegsqqlae vpdsrttnpl grvpfvtfvp eidavgngvs lvdalmpaqr
      241 sidtmrfnll laaqfaafrq rvttgydpvl rdgngdpivk rgedgepild adgqeqpivr
      301 spgrvgvdrl lafpgeltkv fdleesdlkn yvaaldmlva tfaaiaqvpp qyligdfknv
      361 sgdlmvatea tlrslitdlq tgygesikev trlveiargg danelsdlev dwsdadpkni
      421 nqlasaaaqm vpngaplkmf leqwpgatpr tverwmkdas eamarivagd yaaiemgpkp
      481 daq
//
LOCUS       WP_235171820             281 aa            linear   BCT 02-MAR-2025
DEFINITION  PD-(D/E)XK nuclease-like domain-containing protein [Rhodococcus
            erythropolis].
ACCESSION   WP_235171820
VERSION     WP_235171820.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024096.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12684.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..281
                     /product="PD-(D/E)XK nuclease-like domain-containing
                     protein"
                     /calculated_mol_wt=31140
     Region          <6..268
                     /region_name="PRK09709"
                     /note="exodeoxyribonuclease VIII"
                     /db_xref="CDD:236615"
ORIGIN      
        1 mtaptepgvy egipdtvyha drnslsssga rsllppsspa kfrhnqdhpi fkdefdfgha
       61 vhkevlgvgm kilevkandw rtkaardake aahqsgkipl ltkdlekvha matavrehpt
      121 aaqllsngkp eqslywrdqa tgimrrarpd wmpnptgsrm ilvdyksavs adkddfaksa
      181 gdygyhcqap wyldgvrelg ldpnpaflfv vqekeapylv nvvelapdal elgsqlnria
      241 iesyatcmqt giwpgygddi klvdlppwiy nrneeltnvq s
//
LOCUS       WP_235171858             288 aa            linear   BCT 02-MAR-2025
DEFINITION  TIM barrel protein [Rhodococcus erythropolis].
ACCESSION   WP_235171858
VERSION     WP_235171858.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 288)
  AUTHORS   Fry,J., Wood,M. and Poole,P.S.
  TITLE     Investigation of myo-inositol catabolism in Rhizobium leguminosarum
            bv. viciae and its effect on nodulation competitiveness
  JOURNAL   Mol Plant Microbe Interact 14 (8), 1016-1025 (2001)
   PUBMED   11497462
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013429.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01261.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..288
                     /product="TIM barrel protein"
                     /calculated_mol_wt=30655
     Region          5..288
                     /region_name="VpdB_C"
                     /note="C-terminal fragment of effector protein VpdB;
                     cl30226"
                     /db_xref="CDD:421976"
ORIGIN      
        1 mntpriagap iswgvcevpg wgyqldpaqv lremrevgla ateigpegfl ptapaemarv
       61 ladhdlsavg gfapvllhdh ehdpvpgisp ildgfvasga evlvlaaatg sdgydsrpel
      121 deqswktllh nldrladaaa ergiravvhp hvgtmieqrd evlrvldgsa iplcldtghl
      181 liggtdpvdl arqapervth vhlkdvddal asrvrsgelt ytdgvkagmy rplgggdvdi
      241 agvtailqrh gfdgwyvleq dtilteapsd egpvrdvras veylrsvl
//
LOCUS       WP_235171922             212 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Rhodococcus erythropolis].
ACCESSION   WP_235171922
VERSION     WP_235171922.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 212)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..212
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=22524
     Region          3..210
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 misvlivddq rlvraglrml caaaedmtva geasngvdav alaaeldpdv ilmdlrmpgl
       61 dgigatqqiv kagrrarilv lttfddddhl ypalaagasg ffvkdtepae llgairriae
      121 gemvftpell rrvvdravig giadtavtek vpltdresqv lalvaegksn qeiadtlhlg
      181 vttvkthaan lmsktgcdnr vrlavyhlqn vq
//
LOCUS       WP_235171930             326 aa            linear   BCT 02-MAR-2025
DEFINITION  alkaline phosphatase family protein [Rhodococcus erythropolis].
ACCESSION   WP_235171930
VERSION     WP_235171930.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 326)
  AUTHORS   Jin-Hua,P., Goding,J.W., Nakamura,H. and Sano,K.
  TITLE     Molecular cloning and chromosomal localization of PD-Ibeta (PDNP3),
            a new member of the human phosphodiesterase I genes
  JOURNAL   Genomics 45 (2), 412-415 (1997)
   PUBMED   9344668
REFERENCE   2  (residues 1 to 326)
  AUTHORS   Peiffer,W.E., Desrosiers,M.G. and Menick,D.R.
  TITLE     Cloning and expression of the unique Ca2+-ATPase from
            Flavobacterium odoratum
  JOURNAL   J Biol Chem 271 (9), 5095-5100 (1996)
   PUBMED   8617788
REFERENCE   3  (residues 1 to 326)
  AUTHORS   Deissler,H., Lottspeich,F. and Rajewsky,M.F.
  TITLE     Affinity purification and cDNA cloning of rat neural
            differentiation and tumor cell surface antigen gp130RB13-6 reveals
            relationship to human and murine PC-1
  JOURNAL   J Biol Chem 270 (17), 9849-9855 (1995)
   PUBMED   7730366
REFERENCE   4  (residues 1 to 326)
  AUTHORS   Murata,J., Lee,H.Y., Clair,T., Krutzsch,H.C., Arestad,A.A.,
            Sobel,M.E., Liotta,L.A. and Stracke,M.L.
  TITLE     cDNA cloning of the human tumor motility-stimulating protein,
            autotaxin, reveals a homology with phosphodiesterases
  JOURNAL   J Biol Chem 269 (48), 30479-30484 (1994)
   PUBMED   7982964
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01663.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..326
                     /product="alkaline phosphatase family protein"
                     /calculated_mol_wt=32761
     Region          9..>254
                     /region_name="AtaC"
                     /note="c-di-AMP phosphodiesterase AtaC or nucleotide
                     pyrophosphatase, AlkP superfamily [Signal transduction
                     mechanisms]; COG1524"
                     /db_xref="CDD:441133"
     Region          <209..308
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
ORIGIN      
        1 mtkkiartsa aitlllagav sagtataaai pgssdlnpsa aektvvigld gtmlshikta
       61 daprlqklia egtsgessil ghttisgpsw stiltgvwdt khgvkdntya garfdlypsv
      121 ftrletaqps lltesistwg gidniassgt pkadvvvttt dagsgaatda atadavardi
      181 tdkgpdlift qldqvdgagh sggtngaaye esiasvdaqv gkiidavdqr aaktgekwtv
      241 lvtadhghkp agghggqtpa eattfviarg agyaagkttd sytiaditpt ilqslgvalp
      301 adldgkpltk dapgfvgsid lgffgs
//
LOCUS       WP_235171953             385 aa            linear   BCT 02-MAR-2025
DEFINITION  THUMP-like domain-containing protein [Rhodococcus erythropolis].
ACCESSION   WP_235171953
VERSION     WP_235171953.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037043.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18096.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..385
                     /product="THUMP-like domain-containing protein"
                     /calculated_mol_wt=41194
     Region          81..>178
                     /region_name="COG2263"
                     /note="Predicted RNA methylase [General function
                     prediction only]"
                     /db_xref="CDD:441864"
     Region          311..383
                     /region_name="Thump_like"
                     /note="THUMP domain-like; pfam18096"
                     /db_xref="CDD:465646"
ORIGIN      
        1 mgydftlgdv aylgsdsgva alaevdqlel strtrladig rartrfgdhm palvdtvllr
       61 rkaaaklpgs dqwlftddam qqatpgvvaa hraqrligrd vhdvtcsiga elhaltgvah
      121 rvigsdidsv rlamaqrnvp saallradal rpttretvvl adparrsggr rthdpaalmp
      181 plpdlieays grdlavkcap gldfdnlgwa gevevvsldg gvkeaclwst glaesgvtrr
      241 asvlrsdgsg waitdaeddv ipeqapgewi idpdgavvra glvrhyaarh glwqldpria
      301 yltgdsvpeg vrgfrileqi kysekllkqt lskrdcgvae ilvrgvdvdp avlrprlklk
      361 gslalsvviv rigrsasafi ceasr
//
LOCUS       WP_235171959             220 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Rhodococcus erythropolis].
ACCESSION   WP_235171959
VERSION     WP_235171959.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 220)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..220
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=23598
     Region          2..213
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mpitvfiadd qamvrqgfga llsaqpdisv igdapdgkia vaevarlrpd vvlmdvrmpe
       61 mngldaarqi lsagweppvr vlmlttfdid dyvyealsvg asgfmlkdap aeeliravrv
      121 vaegqallap tvtrrliadv tsrraaphar paaldaltpr erevleliar glsnveiaer
      181 lfvaeqtvkt hvgkvlskld lrdraqavvl ayesglvtpg
//
LOCUS       WP_235172008             540 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: AMP-binding protein [Rhodococcus].
ACCESSION   WP_235172008
VERSION     WP_235172008.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus
  ORGANISM  Rhodococcus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae.
REFERENCE   1  (residues 1 to 540)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Rhodococcus"
                     /db_xref="taxon:1827"
     Protein         1..540
                     /product="AMP-binding protein"
                     /calculated_mol_wt=57937
     Region          50..539
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(189,192..197,199..200)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(192,307..308,329..334,422,434,437,448,531)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(192,232..233,281,283..284,287,307..308,329..334,422,
                     434,437,445..448,512)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(232,283..284,287,307,445..447,506,512)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
ORIGIN      
        1 mstdptarvr elldqydtph asaaellcdr hpadgvaftv veadlssvdl tyghlreqsa
       61 rfaaaladlg vepgdnvatl mgksadlvva llgiwrrgav hvplftafas paiafrltas
      121 gakvvisdan qleklapged ipadaawqvv vaggaagdel dfdalvaaqd aedpkgaaqa
      181 vggnapmvql ftsgttgtpk gvpvpvrala sfhayqefgl dvrdddvfwn aadpgwaygl
      241 yyallgplaa gtrsillhag fsapltwqii ekfgvtnfaa aptvyrslra dkapvpegis
      301 lrrassagep ltpdvvawsk nslgvevrdh ygqtehgmfi vnawadglre dvrpgsmgrp
      361 lpgwsaavle dnsddiapar tqgrvaidth nsplmwftgy vdapektkqr fsedgrwyit
      421 gdagmtdedg ffffssrddd viimagyrig pfdvesvlvm hehvieaavv gmpdelrgev
      481 leafvvlreg vdgddeleke lqtlvkkkfa ahayprtvhf vpnlpktpsg kvqryilrkg
//
LOCUS       WP_235172114             557 aa            linear   BCT 02-MAR-2025
DEFINITION  putative PEP-binding protein [Rhodococcus erythropolis].
ACCESSION   WP_235172114
VERSION     WP_235172114.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 557)
  AUTHORS   Lim,K., Read,R.J., Chen,C.C., Tempczyk,A., Wei,M., Ye,D., Wu,C.,
            Dunaway-Mariano,D. and Herzberg,O.
  TITLE     Swiveling domain mechanism in pyruvate phosphate dikinase
  JOURNAL   Biochemistry 46 (51), 14845-14853 (2007)
   PUBMED   18052212
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014895.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02896.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..557
                     /product="putative PEP-binding protein"
                     /GO_function="GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA]"
                     /GO_process="GO:0016310 - phosphorylation [Evidence IEA]"
                     /calculated_mol_wt=56759
     Region          10..545
                     /region_name="PtsA"
                     /note="Phosphoenolpyruvate-protein kinase (PTS system EI
                     component in bacteria) [Carbohydrate transport and
                     metabolism]; COG1080"
                     /db_xref="CDD:440698"
ORIGIN      
        1 mteqlnritv hgtpvvpgia ygpaiwpssr pelvtdapal geadreaaad tfvaaakvve
       61 nrllgraaea tgaaaevlqa naamaadrgw igaakksiag gvppvqaaia ateqfvvlft
      121 kvggvmaerv tdledirdrv iaelsglpep gvpmpetpsv lcaddlapad tagldatkii
      181 glvtiyggpt shtaiiarql gipcivaake lesisagtpi lidgttgdvi aepdpeqare
      241 lveqsridre rvstwtgpgq tadgrpvdvl anvqdgagar aaastaaggi glfrtelcfl
      301 greteptvde qaaiyaevle afagkkviir tldagsdkpl kfanhqeean palgvrgvri
      361 awqdmgildr qldaiaaaaa stnsspwvma pmiatpaeak rfadavrard lvpgvmveip
      421 aaalladqil ehveflsigt ndlaqytmaa drmsseladl tdpwqpavla lvartaqagq
      481 aagkrvgvcg eaaadpllac vlaglgvssl scaaasvagv gakvgsvtma qceaaaaavl
      541 atgdpvaark aaadals
//
LOCUS       WP_235172180             477 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: putative nucleotidyltransferase substrate binding
            domain-containing protein [Rhodococcus erythropolis group].
ACCESSION   WP_235172180
VERSION     WP_235172180.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis group
  ORGANISM  Rhodococcus erythropolis group
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021824.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10335.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Rhodococcus erythropolis group"
                     /db_xref="taxon:2840174"
     Protein         1..477
                     /product="putative nucleotidyltransferase substrate
                     binding domain-containing protein"
                     /calculated_mol_wt=50941
     Region          21..133
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
     Site            order(23,25..27,49..51,113,126,128,130..131)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:341363"
     Region          23..86
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341363"
     Site            order(49,60,65..66,69,91,113..115,130)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:341363"
     Region          91..133
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341363"
     Region          158..313
                     /region_name="NT_GlnE_GlnD_like"
                     /note="Nucleotidyltransferase (NT) domain of Escherichia
                     coli adenylyltransferase (GlnE), Escherichia coli uridylyl
                     transferase (GlnD), and similar proteins; cd05401"
                     /db_xref="CDD:143391"
     Site            order(226,228,263)
                     /site_type="metal-binding"
                     /note="metal binding triad"
                     /db_xref="CDD:143391"
     Region          330..465
                     /region_name="DUF294_C"
                     /note="Putative nucleotidyltransferase substrate binding
                     domain; pfam10335"
                     /db_xref="CDD:463050"
ORIGIN      
        1 mtghsagqgm qspamrrvrd llrgpaivcd gratirdaak lmtdagrrav viptettgfg
       61 iftegdlrar vvvggidsnq pvstvmtpsa vtvdpdrlga davtdmleyg lrhlpvvtea
      121 galmgvlels dlltsatnqg felraalata qddshlieta ravpvlvtel vasrvspldi
      181 gatlavlidv tvrraielvv ggderpdfaw lslgsvarre alpssdidsa lvwggeshhe
      241 gadaaktihd ildlcgfprd tknavatqar fartlpqwrt alrkwvsnpy qdqalvmlsm
      301 ladarvvagd paldprpaal dqlrlhpavm rlllreavgd kaklhsfkdv mtrrtgtvdl
      361 kasavqpivn iarwagisvg artsstlerl kaaagsgfll dddaqvlies fevlqqirvr
      421 hqtdqfsagr pptdevviae ltplsrslls navrevagvq rrleyaasas alpdidp
//
LOCUS       WP_235172152             159 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-isopropylmalate synthase regulatory domain-containing protein
            [Rhodococcus erythropolis].
ACCESSION   WP_235172152
VERSION     WP_235172152.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 159)
  AUTHORS   Koon,N., Squire,C.J. and Baker,E.N.
  TITLE     Crystal structure of LeuA from Mycobacterium tuberculosis, a key
            enzyme in leucine biosynthesis
  JOURNAL   Proc Natl Acad Sci U S A 101 (22), 8295-8300 (2004)
   PUBMED   15159544
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020091.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08502.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..159
                     /product="alpha-isopropylmalate synthase regulatory
                     domain-containing protein"
                     /GO_function="GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=16864
     Region          <36..157
                     /region_name="PRK03739"
                     /note="2-isopropylmalate synthase; Validated"
                     /db_xref="CDD:235154"
ORIGIN      
        1 mtynfafasd ssstaadpfa arhgkslpag lraecsamsw tefestyaam sgpirlgaws
       61 sekiapgrwt featlglger iqkasatstg aisamtsmlh dagisleils fhqhqighrt
      121 atfiftecdg srswamgiae sstesslram tsaanrfsh
//
LOCUS       WP_235172318             400 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rhodococcus erythropolis].
ACCESSION   WP_235172318
VERSION     WP_235172318.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..400
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=41703
     Region          4..362
                     /region_name="2A0121"
                     /note="H+ Antiporter protein; TIGR00900"
                     /db_xref="CDD:162098"
ORIGIN      
        1 mvnlatlfsa igngiaivvl pwlvlertgr atdaaivaga aavpllvssl fsgtfvdkfg
       61 rrrtsmisda lsamsvaaip iiaataglti pviaalaalg avfdpagmaa resmlpaatr
      121 takwkldrtn svyeanfnva yligpgiggv liatigavnt lwvtaagfvf sivvvafirl
      181 pgagvpeheh rpksiwhgtl dglrfvwnnr llrtlalidm avvalympve svvfpvyfte
      241 ldqpaqlgsv lmalaiggii gslayaplap imsrrlimif avavlgtaml amallpplwv
      301 ilvlaglqgl vygpvgpian yamqthspeh mrgrvvgvmt stayaagplg ylavgplldq
      361 lgiastfval sipiiliaav caslpvlrel drprhstdvs
//
LOCUS       WP_235172348             363 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Rhodococcus
            erythropolis].
ACCESSION   WP_235172348
VERSION     WP_235172348.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..363
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=37787
     Region          <4..356
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 maripimcea glkdptaank ttfgsgmfqm teavandhys yvrrdgynwg pdgttsdtag
       61 vpknvvasii tnnstaanqv lsgdlnaaav sgpdqdrmna anldtvkqpa pagemffnhs
      121 pgnptsdpav rkalvqalnl ddlaeiftag rgtrsttmvs iepraciyds vagnlpdfdt
      181 saaaatlesa gwkagadgkr skdgtplrir mvyetfgdat daaadvavna wndlgatvel
      241 tsgdsnkild valsgkdnta wdvawepinv alpsmlvpfl sgpvpaagmn fasisnpayd
      301 aavekasglt gedacaawad aeseiikans avpfadkitt lyfnnaglaf grnfigsalr
      361 lyq
//
LOCUS       WP_235172359              97 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: Ada metal-binding domain-containing protein
            [Rhodococcus].
ACCESSION   WP_235172359
VERSION     WP_235172359.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus
  ORGANISM  Rhodococcus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae.
REFERENCE   1  (residues 1 to 97)
  AUTHORS   Sakashita,H., Sakuma,T., Ohkubo,T., Kainosho,M., Sakumi,K.,
            Sekiguchi,M. and Morikawa,K.
  TITLE     Folding topology and DNA binding of the N-terminal fragment of Ada
            protein
  JOURNAL   FEBS Lett 323 (3), 252-256 (1993)
   PUBMED   8500619
REFERENCE   2  (residues 1 to 97)
  AUTHORS   Myers,L.C., Terranova,M.P., Nash,H.M., Markus,M.A. and Verdine,G.L.
  TITLE     Zinc binding by the methylation signaling domain of the Escherichia
            coli Ada protein
  JOURNAL   Biochemistry 31 (19), 4541-4547 (1992)
   PUBMED   1581309
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014821.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02805.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Rhodococcus"
                     /db_xref="taxon:1827"
     Protein         1..97
                     /product="Ada metal-binding domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006281 - DNA repair [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=10278
     Region          1..>78
                     /region_name="PRK15435"
                     /note="bifunctional DNA-binding transcriptional
                     regulator/O6-methylguanine-DNA methyltransferase Ada"
                     /db_xref="CDD:185333"
ORIGIN      
        1 mpsktyilrd arnkpyesst pgalgghrkt kiygrldcrg aaqaiarggy lasrvffade
       61 ptaiaagyrp cavcmpegya awkaatthrs grgtpse
//
LOCUS       WP_235172385             316 aa            linear   BCT 02-MAR-2025
DEFINITION  proline dehydrogenase family protein [Rhodococcus erythropolis].
ACCESSION   WP_235172385
VERSION     WP_235172385.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 316)
  AUTHORS   Ling,M., Allen,S.W. and Wood,J.M.
  TITLE     Sequence analysis identifies the proline dehydrogenase and delta
            1-pyrroline-5-carboxylate dehydrogenase domains of the
            multifunctional Escherichia coli PutA protein
  JOURNAL   J Mol Biol 243 (5), 950-956 (1994)
   PUBMED   7966312
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013761.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01619.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..316
                     /product="proline dehydrogenase family protein"
                     /calculated_mol_wt=34666
     Region          35..>274
                     /region_name="PutA"
                     /note="Proline dehydrogenase [Amino acid transport and
                     metabolism]; COG0506"
                     /db_xref="CDD:440272"
ORIGIN      
        1 mdlqaqaadv lrrlaldesl kertmadaat aalarkvaar yiggetidda fdrlpsifar
       61 ghkasieytg esvrdpelan aetdvfvela erigtsgvds tvsfdlshig lvidpeqcfr
      121 nvvrlaette rvgaeliisa easdrtdlvl dmharlaehf thvgitvqar lhrtakdlaa
      181 lldrpgrirl vkgafleaes vayprgsael rgayldyaar ivdsghqvsi athdrdilea
      241 lraehdsklr aehvefemll glgteqldal raagfttrey vifgtqwwly vlnriaeepe
      301 rvytalidaa lgstan
//
LOCUS       WP_235172448             297 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4231 domain-containing protein [Rhodococcus erythropolis].
ACCESSION   WP_235172448
VERSION     WP_235172448.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025381.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14015.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..297
                     /product="DUF4231 domain-containing protein"
                     /calculated_mol_wt=32557
     Region          15..177
                     /region_name="DUF4231"
                     /note="Protein of unknown function (DUF4231); cl16538"
                     /db_xref="CDD:472963"
     Region          169..290
                     /region_name="SLATT_1"
                     /note="SMODS and SLOG-associating 2TM effector domain 1;
                     pfam18181"
                     /db_xref="CDD:436331"
ORIGIN      
        1 mttvdavsdt dmpqlfqaad qasleaqkay vggtrnrlll lgsaavlgif twrvgagrid
       61 vfgligmgif vvailiegtl wrdrpdkswy dgravaestk tlawkfavcg lpfpnslahv
      121 davkalverm esvrnqfgel eltplaapli sewmiqqres sledrrrsyl aarikdqmgw
      181 yarkakynkk rskqwrfalv tlelagaass lwaafsesvt alapaiaalv vgavawtetk
      241 qhdanaraya aavadlanae tklqlattee swatevddae eaisrehviw latrsrl
//
LOCUS       WP_235172500             552 aa            linear   BCT 02-MAR-2025
DEFINITION  S-type pyocin domain-containing protein [Enterobacter cloacae].
ACCESSION   WP_235172500
VERSION     WP_235172500.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter cloacae
  ORGANISM  Enterobacter cloacae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 552)
  AUTHORS   Michel-Briand,Y. and Baysse,C.
  TITLE     The pyocins of Pseudomonas aeruginosa
  JOURNAL   Biochimie 84 (5-6), 499-510 (2002)
   PUBMED   12423794
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018642.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06958.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Enterobacter cloacae"
                     /db_xref="taxon:550"
     Protein         1..552
                     /product="S-type pyocin domain-containing protein"
                     /calculated_mol_wt=60308
     Region          10..84
                     /region_name="PAAR_CT_2"
                     /note="proline-alanine-alanine-arginine (PAAR) domain with
                     uncharacterized C-terminal extension; cd14744"
                     /db_xref="CDD:269829"
     Site            order(10..13,38..41,71..74)
                     /site_type="other"
                     /note="PAAR motifs"
                     /db_xref="CDD:269829"
     Region          290..421
                     /region_name="Pyocin_S"
                     /note="S-type Pyocin; pfam06958"
                     /db_xref="CDD:399737"
     Region          <508..549
                     /region_name="HNHc"
                     /note="HNH nucleases; HNH endonuclease signature which is
                     found in viral, prokaryotic, and eukaryotic proteins. The
                     alignment includes members of the large group of homing
                     endonucleases, yeast intron 1 protein, MutS, as well as
                     bacterial colicins, pyocins, and...; cd00085"
                     /db_xref="CDD:238038"
     Site            order(518,520..522,524,536..537,541..542,545,549)
                     /site_type="active"
                     /db_xref="CDD:238038"
ORIGIN      
        1 mgyrstnygr gqalhgdrtt tgaiccstlp nctehgrgvi rvgdkttacp kcgkqgvvad
       61 geprvnwmgq tsavdgsvvi cgcphgtnrv iapsgewlgs gpspeqiaqe khqamlaarr
      121 keqeaeaqrq aeerdrnrvf aksclrgegc ndagtgseph tnfaemafyq aipnnalqha
      181 qaakrkalpk pkqrsalylw wnghheemdy qaavaaeera wtarnaiada selalvggrt
      241 itsgtwavrg aalgeiatgg lgapvaglli gmypgklndg eqdfidrmra eqmreaptrv
      301 rftlendasg nptprgwhtp pgkdsvrvrr mewdsrrqay tftteedpci tliwtpdrtg
      361 eskpwdtgnh npvripnpvv vdplpvdtgi gattsptpee ktfadyilil pvggvppiyv
      421 yirhnpgqvt gkgqkisgiw lsdanagngs pipsqiadrl rgqtftdfdq frkafwlevs
      481 rdpglleqfi snnrasmrkg napytrtpds vgkreryeih hiqpisqggk vydvdnmgit
      541 tpkhhikihk ge
//
LOCUS       WP_235172477             315 aa            linear   BCT 02-MAR-2025
DEFINITION  HipA domain-containing protein [Xanthomonas citri].
ACCESSION   WP_235172477
VERSION     WP_235172477.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas citri
  ORGANISM  Xanthomonas citri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 315)
  AUTHORS   Black,D.S., Irwin,B. and Moyed,H.S.
  TITLE     Autoregulation of hip, an operon that affects lethality due to
            inhibition of peptidoglycan or DNA synthesis
  JOURNAL   J Bacteriol 176 (13), 4081-4091 (1994)
   PUBMED   8021189
REFERENCE   2  (residues 1 to 315)
  AUTHORS   Black,D.S., Kelly,A.J., Mardis,M.J. and Moyed,H.S.
  TITLE     Structure and organization of hip, an operon that affects lethality
            due to inhibition of peptidoglycan or DNA synthesis
  JOURNAL   J Bacteriol 173 (18), 5732-5739 (1991)
   PUBMED   1715862
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019421.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07804.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Xanthomonas citri"
                     /db_xref="taxon:346"
     Protein         1..315
                     /product="HipA domain-containing protein"
                     /calculated_mol_wt=34835
     Region          <6..309
                     /region_name="HipA-like"
                     /note="serine/threonine-protein kinases similar to HipA
                     and CtkA; cl28916"
                     /db_xref="CDD:355792"
     Site            order(42..46,48,70,72,100,115..119,132,190,192,195,
                     212..213)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:341493"
ORIGIN      
        1 mlsgasdgie pltdgelear lrrlrqdiga arqvddvgqf slagaqakia llhdglqwai
       61 pagriptthi lkppsgeydg fvenelfclr larsfglpta hcqalrvgae taicverydr
      121 ilidgallri hqedicqalg vmphikyqnq ggpgveaisq llwthssqpr qdvetlfqal
      181 vfnyliggtd ahaknyslll gvgrqvrlap lydissalpy pqlqrrrikl amkmgshyrw
      241 wdirpsdwiq vastlrldas eclawmrgav sdmpdrahdl laslaredva hpildalved
      301 ianacsrirk llqpd
//
LOCUS       WP_235172541             914 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase family 18 protein [Enterobacter cloacae].
ACCESSION   WP_235172541
VERSION     WP_235172541.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter cloacae
  ORGANISM  Enterobacter cloacae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 914)
  AUTHORS   Perrakis,A., Tews,I., Dauter,Z., Oppenheim,A.B., Chet,I.,
            Wilson,K.S. and Vorgias,C.E.
  TITLE     Crystal structure of a bacterial chitinase at 2.3 A resolution
  JOURNAL   Structure 2 (12), 1169-1180 (1994)
   PUBMED   7704527
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00704.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Enterobacter cloacae"
                     /db_xref="taxon:550"
     Protein         1..914
                     /product="glycosyl hydrolase family 18 protein"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=97741
     Region          23..153
                     /region_name="X25_BaPul_like"
                     /note="X25 domain of Bacillus acidopullulyticus
                     pullulanase and similar proteins; cl46869"
                     /db_xref="CDD:481209"
     Region          139..559
                     /region_name="ChiA"
                     /note="Chitinase, GH18 family [Carbohydrate transport and
                     metabolism]; COG3325"
                     /db_xref="CDD:442554"
     Region          <565..791
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
     Region          819..860
                     /region_name="ChiC_BD"
                     /note="Chitin-binding domain of chitinase C; cd12215"
                     /db_xref="CDD:213178"
     Region          868..904
                     /region_name="ChiC_BD"
                     /note="Chitin-binding domain of chitinase C; cd12215"
                     /db_xref="CDD:213178"
ORIGIN      
        1 mkfmkptyla lfvaavsgsa faaapgtpsi ssgndkfaiv evdqavvdyg nlvkvhndgv
       61 dvkvewnvws gdaptsgkvl ldgktvwsga agasgsatfk vkkggryqeq velcnnsgct
      121 ksaskliiva dtdgshllpl naplqennkt fakhtdkvva ayfpewgvyg rnfpvdkipa
      181 anlnhilygf ipicggdgin dglktvengn sfanlqkaca grpdytvaih dpwaalqkpq
      241 sgvfnwddpy kgnfgqlmal kkahpdlkil psiggwtmsd pfyhmndsai rarfvasvkd
      301 flktwkffdg vdidwefpgg ggvneslgnp qvdkatytal mhdlrtmlne lsaetgrtye
      361 ltsaigagkd kiedvdytta qqyldhiflm sydfygawsm tdlghqaalh apawrpdtny
      421 ttengvnall eqgvqpgkiv vgtgmygrgw tgvhgytgnn pftgtatdgv kgtwepgvvd
      481 yrqivneykg kpgweygyda daeapyvfnk stgelisyed arsatakgky vlaknlgglf
      541 awsidsdngd ilnamnesll gsstpdpvvt nhapvasaad qtvtgpatvt ldgsastdpd
      601 gdaltykwtq isgpsvtltn stkakatfsv gavtsnqtla frltvtdpkg lsstadvqvl
      661 nkapkanqap vvnqmqnvtl eagqtyalnv qaadpdgdal tyawsvpsdm hatgtdtssv
      721 qitapdvttd stytlsvvvs dgktsvqsnv qvtvtpkatp vvpdedntps degntpsdeg
      781 ntpsdegntp sdegntpsde gtatgscdnp vdanaskyaa wesskiynng dmvssdnlvw
      841 kakywtqgnk pgfnadawel vsqvkmnwrs dmvynggdkt tyqgfeyrak wwtkgdkpgn
      901 sdvwvkegas adck
//
LOCUS       WP_235172567             101 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family protein [Enterobacter cloacae].
ACCESSION   WP_235172567
VERSION     WP_235172567.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter cloacae
  ORGANISM  Enterobacter cloacae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 101)
  AUTHORS   Heinz,D.W. and Matthews,B.W.
  TITLE     Rapid crystallization of T4 lysozyme by intermolecular disulfide
            cross-linking
  JOURNAL   Protein Eng 7 (3), 301-307 (1994)
   PUBMED   8177878
REFERENCE   2  (residues 1 to 101)
  AUTHORS   Blaber,M., Lindstrom,J.D., Gassner,N., Xu,J., Heinz,D.W. and
            Matthews,B.W.
  TITLE     Energetic cost and structural consequences of burying a hydroxyl
            group within the core of a protein determined from Ala-->Ser and
            Val-->Thr substitutions in T4 lysozyme
  JOURNAL   Biochemistry 32 (42), 11363-11373 (1993)
   PUBMED   8218201
REFERENCE   3  (residues 1 to 101)
  AUTHORS   Weaver,L.H. and Matthews,B.W.
  TITLE     Structure of bacteriophage T4 lysozyme refined at 1.7 A resolution
  JOURNAL   J Mol Biol 193 (1), 189-199 (1987)
   PUBMED   3586019
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013152.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00959.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Enterobacter cloacae"
                     /db_xref="taxon:550"
     Protein         1..101
                     /product="glycoside hydrolase family protein"
                     /GO_function="GO:0003796 - lysozyme activity [Evidence
                     IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /GO_process="GO:0016998 - cell wall macromolecule
                     catabolic process [Evidence IEA]"
                     /calculated_mol_wt=11408
     Region          32..>101
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
ORIGIN      
        1 madikerlrl yegsldyqkh lgyykngkfw vykdslgypt igyghlvqkg edfsngitpi
       61 eadillahdi ekaktglrtl nlgtlpkdie dylvimifql g
//
LOCUS       WP_235172573             184 aa            linear   BCT 02-MAR-2025
DEFINITION  toxin YdaT family protein [Enterobacter cloacae].
ACCESSION   WP_235172573
VERSION     WP_235172573.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter cloacae
  ORGANISM  Enterobacter cloacae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 184)
  AUTHORS   Bindal,G., Krishnamurthi,R., Seshasayee,A.S.N. and Rath,D.
  TITLE     CRISPR-Cas-Mediated Gene Silencing Reveals RacR To Be a Negative
            Regulator of YdaS and YdaT Toxins in Escherichia coli K-12
  JOURNAL   mSphere 2 (6), e00483-17 (2017)
   PUBMED   29205229
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 184)
  AUTHORS   Yamaguchi,Y. and Inouye,M.
  TITLE     Regulation of growth and death in Escherichia coli by
            toxin-antitoxin systems
  JOURNAL   Nat Rev Microbiol 9 (11), 779-790 (2011)
   PUBMED   21927020
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018013.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06254.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Enterobacter cloacae"
                     /db_xref="taxon:550"
     Protein         1..184
                     /product="toxin YdaT family protein"
                     /calculated_mol_wt=20262
     Region          71..154
                     /region_name="YdaT_toxin"
                     /note="Putative bacterial toxin ydaT; pfam06254"
                     /db_xref="CDD:368819"
ORIGIN      
        1 mqyityehhi nmtnaslkse nhfhmkrrgq iscrrifeav rewestlpgq aqekiallva
       61 eqwtkeggrg iainkqnlfr ylkneggsek ytayimqlsg aivaampiei srkhglsnar
      121 teaelvasai kecseahqak llgaplqkle keirgaaial fnmlpadaag pllasisava
      181 pqff
//
LOCUS       WP_235172574             352 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaT-like ssDNA-binding domain-containing protein [Enterobacter
            cloacae].
ACCESSION   WP_235172574
VERSION     WP_235172574.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter cloacae
  ORGANISM  Enterobacter cloacae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 352)
  AUTHORS   Fujiyama,S., Abe,Y., Tani,J., Urabe,M., Sato,K., Aramaki,T.,
            Katayama,T. and Ueda,T.
  TITLE     Structure and mechanism of the primosome protein DnaT-functional
            structures for homotrimerization, dissociation of ssDNA from the
            PriB.ssDNA complex, and formation of the DnaT.ssDNA complex
  JOURNAL   FEBS J 281 (23), 5356-5370 (2014)
   PUBMED   25265331
REFERENCE   2  (residues 1 to 352)
  AUTHORS   Liu,Z., Chen,P., Wang,X., Cai,G., Niu,L., Teng,M. and Li,X.
  TITLE     Crystal structure of DnaT84-153-dT10 ssDNA complex reveals a novel
            single-stranded DNA binding mode
  JOURNAL   Nucleic Acids Res 42 (14), 9470-9483 (2014)
   PUBMED   25053836
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037684.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17948.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Enterobacter cloacae"
                     /db_xref="taxon:550"
     Protein         1..352
                     /product="DnaT-like ssDNA-binding domain-containing
                     protein"
                     /calculated_mol_wt=38569
     Region          20..67
                     /region_name="HTH_36"
                     /note="Helix-turn-helix domain; pfam13730"
                     /db_xref="CDD:463970"
     Region          <202..270
                     /region_name="DnaT"
                     /note="DnaT DNA-binding domain; cl46275"
                     /db_xref="CDD:480615"
ORIGIN      
        1 msidamrwak kvktgksssk ailtwladmc gadlcaypsv aalaeatemd rktvlaglqh
       61 lqeiglvvdt gerrgrtkqi pvyklvgvee sipdaeqtqn rnslkdskng tvnlndteng
      121 tvntnsaing tisgdkgtkt givngsdfnq rvpffplnsp kngtrnlprn hkdlnpthre
      181 lvepvipdyp dqpgigigqq qpfgkfrmfk nwnptadfar qanlwgmpik aginieaels
      241 sfiaywqaeg kvfhqiqweq kfarhldrak vlkapqtggt enasvrtqpa asrvvqqiqs
      301 ahaewrrrng ldgdgdsvav vagyggnlle pldaeewgrt hgpvdssdrf dd
//
LOCUS       WP_235172626             304 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-grasp fold amidoligase family protein [Enterobacter cloacae].
ACCESSION   WP_235172626
VERSION     WP_235172626.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter cloacae
  ORGANISM  Enterobacter cloacae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   Iyer,L.M., Abhiman,S., Maxwell Burroughs,A. and Aravind,L.
  TITLE     Amidoligases with ATP-grasp, glutamine synthetase-like and
            acetyltransferase-like domains: synthesis of novel metabolites and
            peptide modifications of proteins
  JOURNAL   Mol Biosyst 5 (12), 1636-1660 (2009)
   PUBMED   20023723
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025663.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14305.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Enterobacter cloacae"
                     /db_xref="taxon:550"
     Protein         1..304
                     /product="ATP-grasp fold amidoligase family protein"
                     /calculated_mol_wt=35577
     Region          51..295
                     /region_name="CPSase_L_D2"
                     /note="Carbamoyl-phosphate synthase L chain, ATP binding
                     domain; cl17255"
                     /db_xref="CDD:473076"
ORIGIN      
        1 mnkttyylkh leyllrkcrs ylisdinfhl srlkathgdt fdikspatln ekichrlvyd
       61 hnahytmlad klavreyvls rtqrlkivpl igvyrrvehi dmtklphkfv lkcnhdsgsa
      121 iictnkaefd lkksqnklrl alkrnlyytt rewqyknipp vilcekyidl fndtdknttp
      181 emlrihcfhg vaqfveadft desgngfinv ydrhwqlqpf qmeypntlqd ipkpasyqea
      241 llaaqelalg idycrvdlml trdeiyfsei tlspkrgkla itppewdarl gemwqmtpva
      301 nrli
//
LOCUS       WP_235172388            1091 aa            linear   BCT 02-MAR-2025
DEFINITION  arabinosyltransferase domain-containing protein [Rhodococcus
            erythropolis].
ACCESSION   WP_235172388
VERSION     WP_235172388.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 1091)
  AUTHORS   Belanger,A.E., Besra,G.S., Ford,M.E., Mikusova,K., Belisle,J.T.,
            Brennan,P.J. and Inamine,J.M.
  TITLE     The embAB genes of Mycobacterium avium encode an arabinosyl
            transferase involved in cell wall arabinan biosynthesis that is the
            target for the antimycobacterial drug ethambutol
  JOURNAL   Proc Natl Acad Sci U S A 93 (21), 11919-11924 (1996)
   PUBMED   8876238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016484.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04602.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1091
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..1091
                     /product="arabinosyltransferase domain-containing protein"
                     /GO_function="GO:0052636 - arabinosyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0071766 - Actinobacterium-type cell wall
                     biogenesis [Evidence IEA]"
                     /calculated_mol_wt=115566
     Region          43..194
                     /region_name="Arabino_trans_N"
                     /note="Arabinosyltransferase concanavalin like domain;
                     pfam17689"
                     /db_xref="CDD:435976"
     Region          198..655
                     /region_name="Arabinose_trans"
                     /note="Mycobacterial cell wall arabinan synthesis protein;
                     pfam04602"
                     /db_xref="CDD:377388"
     Region          701..1088
                     /region_name="Arabino_trans_C"
                     /note="EmbC C-terminal domain; pfam14896"
                     /db_xref="CDD:434294"
ORIGIN      
        1 mptgpdapre sdsqrvrtar liaivtgllg lllalatpfl pvkqeaasid wpqggtvnsv
       61 ssplisyspt sldisipcst fgqlgerggt llstmpngap drnargltvr atadrlealt
      121 rdsvlisapl dqlsgctalt ittnseqtva avtgidgvga tltgdyrpqv vgiftdlqga
      181 apaglsahmd vdsrfssspt llklfamiva alstivslya lhridgvdgr rarrflparw
      241 wkftgidalv igtlalwhvf gantsddgyl lgmarvsehs gymanyfrwf gvpeapfgwy
      301 ydvlalfakv stasmwmrlp aliagilcwm visreviprl gvavrrnkva iwtgglvfla
      361 fwlpynnglr pepiialgal ltwcsierai atgrllpaam avliaafsla agpsgliaig
      421 aliagarpil qiliargkrv gflsqimpil aagtvvlvav fadqtlatvl estrvrtavg
      481 pnvpwfeerl rwdalmtisp dgslarrfgm fvmivglvfc vmmilrkgri pgtaigpsrr
      541 ilgivfasll lmqftptkwt hhfgvyagla atvavlaavg vsassmrskr nralfaagil
      601 filavaftss ngwwyvssyg vpwwdkppsi agkgfstafl gltilallla awyhvmepre
      661 rngtedgvek tdsiektrrl rllapsplti aagavvlfev lsllkgavaq ypaysigksn
      721 iesvfggscg lagevlvesd pnagvlqlvd rptdlagaga fgasestgfs pdgvagdlta
      781 daedstagsa nsldtttsqs gttttpgtgs gtaggsqsta gvngsnvalp fgldpaktpv
      841 lgsygapqna slttgwyslp erndaapllt vaaagriryv nsdgivtpga vlqveygkkq
      901 adgsvdalgr vdpidigpsp swrnlrvpmd qlpadadtvr lvasdtdisa dqwlavtppr
      961 vptmrtlqdv vgstdpvlmd wavglafpcq rpvdhlygva eipewrilpd rigaestnaw
     1021 qdhygggplg wtsellsara lptyldndwd rdwgsleqyt pldsdavpaq mnvttetrsg
     1081 twtpgpiryq s
//
LOCUS       WP_235172397             224 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6338 family protein [Rhodococcus erythropolis].
ACCESSION   WP_235172397
VERSION     WP_235172397.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus erythropolis
  ORGANISM  Rhodococcus erythropolis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Liu,Y., Li,M., Mu,H., Song,S., Zhang,Y., Chen,K., He,X., Wang,H.,
            Dai,Y., Lu,F., Yan,Z. and Zhang,H.
  TITLE     Identification and characterization of the ficellomycin
            biosynthesis gene cluster from Streptomyces ficellus
  JOURNAL   Appl Microbiol Biotechnol 101 (20), 7589-7602 (2017)
   PUBMED   28894917
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039733.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19865.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Rhodococcus erythropolis"
                     /db_xref="taxon:1833"
     Protein         1..224
                     /product="DUF6338 family protein"
                     /calculated_mol_wt=24344
     Region          5..219
                     /region_name="DUF6338"
                     /note="Family of unknown function (DUF6338); pfam19865"
                     /db_xref="CDD:466212"
ORIGIN      
        1 mtlntwfsvl affvlaapgl lydqlsarka vrrkesafte igrialvstv csavafvvll
       61 vvaglarcvh whpmpdlsam irsgssyite hiisvsiaav lgltvsmlaa wgafefvnrk
      121 npakityasa waklireelp tpttavhvra tvesgaiwyg rvshfspdme vadreivlcp
      181 plyvqnphgd lselpakwqr vvlrgseitt lavryenppa asng
//
LOCUS       WP_235172640             351 aa            linear   BCT 02-MAR-2025
DEFINITION  phage baseplate assembly protein [Enterobacter cloacae].
ACCESSION   WP_235172640
VERSION     WP_235172640.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter cloacae
  ORGANISM  Enterobacter cloacae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF044847.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21683.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Enterobacter cloacae"
                     /db_xref="taxon:550"
     Protein         1..351
                     /product="phage baseplate assembly protein"
                     /calculated_mol_wt=37773
     Region          2..349
                     /region_name="COG4379"
                     /note="Mu-like prophage tail protein gpP [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443505"
ORIGIN      
        1 mnntvflrvn grewggwtsa risagidrva rdfnvsitrq wpgndgvpqi kngdlvevmi
       61 gddlvitgwv ealplrydaa aitmgivgrs ktadlidcsa apaqhngknl friasalakp
      121 fgidvvdaga patavidaqp ehgetvvdcl nrllgqvqal ayddaqgrlv lgkpgsekas
      181 talvlgenil scdtersvre rfssyqvtgq rpgtdddfge atiaairqst tdsgvtryrp
      241 htvqqsgtat tdsckarcef earqraaktr ettytvqgwr qgngelwrpn lsvivydpln
      301 gfdnellvia evtysqdnng ttteirvgpa daylpepaap kkkktsggte f
//
LOCUS       WP_235172714             403 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Enterobacter cloacae].
ACCESSION   WP_235172714
VERSION     WP_235172714.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter cloacae
  ORGANISM  Enterobacter cloacae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Enterobacter cloacae"
                     /db_xref="taxon:550"
     Protein         1..403
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=42180
     Region          20..390
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(27..28,31..32,35,67,129..130,132..134,137,157,
                     160..161,164,231,234..235,238..240,243,271,275,322..323,
                     327,331,344,347..348,351..352,355)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mrslsdtltd nltpkanwpl alcagllgig qngllvmlpq lvtmtglsls vwagllmfgs
       61 mlflpaspww grqserhgck svmlaslsgy lasffvmalv vwamangmln aawglaglil
      121 srtlygltvs glvpaaqtwa iqraglekrm aalatissgl scgrllgppl aalmlsvnpv
      181 aplclmaiap liallmvlre vadpplppva qqatrlqasm lpylmlalll aalvslmqlg
      241 lsphlsplld gnaaqishhv alllslaala tlaaqflvvr pqhfrpmtll claavlmvvg
      301 lgvmcladvv lfyvgivits lgaamatpgy qlllndrltt gkgagviats htlgyglsal
      361 lvplvtrmfg etflivaawa mallflalsl gvrsverppv grp
//
LOCUS       WP_235172709             177 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4234 domain-containing protein [Enterobacter cloacae].
ACCESSION   WP_235172709
VERSION     WP_235172709.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter cloacae
  ORGANISM  Enterobacter cloacae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025384.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14018.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Enterobacter cloacae"
                     /db_xref="taxon:550"
     Protein         1..177
                     /product="DUF4234 domain-containing protein"
                     /calculated_mol_wt=19835
ORIGIN      
        1 mvdintlsqr lntrtlhlil lsmatcgvwp llwlykkqdi isdttgyply gkmfiiwltv
       61 cfglsrqlga maapdpygyd stgdillals gllsmasgim yvvwafkart alrhyalntf
      121 rfdlkmnafy tvlfnvfyit ycindmhqal akhmiihgtp atsnvpapar teqtnlp
//
LOCUS       WP_235172776             375 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3150 domain-containing protein [Enterobacter cloacae].
ACCESSION   WP_235172776
VERSION     WP_235172776.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter cloacae
  ORGANISM  Enterobacter cloacae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11348.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Enterobacter cloacae"
                     /db_xref="taxon:550"
     Protein         1..375
                     /product="DUF3150 domain-containing protein"
                     /calculated_mol_wt=42654
     Region          29..261
                     /region_name="DUF3150"
                     /note="Protein of unknown function (DUF3150); pfam11348"
                     /db_xref="CDD:431832"
ORIGIN      
        1 mtlntsmlnk vsakqisenf aksypdlleg avitkieisg cqgsrrtdki dlsydgddit
       61 dqksvsksev rwidikalsf kstitsrist lcsrlcirys nmwilpvssm eeflegarei
      121 erefqagiqn vvdnyemhie aeknrsprms slidqlkltk ddfiksfrfn iahfipftpi
      181 svegdetqdy yqeqlitdla eeamrvyeki sknnnlrsst idrlkqmqnk iisfmfihke
      241 aavlaeaikh imnnlpkgai seprdvavlq qwfyfmsdas mlkriisgeq kvtdwlesit
      301 rsfnqssqte pnalqntgie aildstnvfq vepvvendik nstfsntdsv aepeksvsqq
      361 ednaengfdi elkgw
//
LOCUS       WP_235172799             194 aa            linear   BCT 02-MAR-2025
DEFINITION  dihydrofolate reductase [Trueperella pyogenes].
ACCESSION   WP_235172799
VERSION     WP_235172799.1
KEYWORDS    RefSeq.
SOURCE      Trueperella pyogenes
  ORGANISM  Trueperella pyogenes
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Actinomycetales; Actinomycetaceae; Trueperella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012413.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00186.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Trueperella pyogenes"
                     /db_xref="taxon:1661"
     Protein         1..194
                     /product="dihydrofolate reductase"
                     /EC_number="1.5.1.3"
                     /GO_function="GO:0004146 - dihydrofolate reductase
                     activity [Evidence IEA]"
                     /GO_process="GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /calculated_mol_wt=20871
     Region          1..177
                     /region_name="DHFR"
                     /note="Dihydrofolate reductase (DHFR). Reduces
                     7,8-dihydrofolate to 5,6,7,8-tetrahydrofolate with NADPH
                     as a cofactor. This is an essential step in the
                     biosynthesis of deoxythymidine phosphate since
                     5,6,7,8-tetrahydrofolate is required to regenerate 5;
                     cl17279"
                     /db_xref="CDD:473077"
     Site            order(2,19,24,57,111,117)
                     /site_type="other"
                     /note="folate binding site [chemical binding]"
                     /db_xref="CDD:238127"
     Site            order(4,11,41..43,64,112..115)
                     /site_type="other"
                     /note="NADP+ binding site [chemical binding]"
                     /db_xref="CDD:238127"
ORIGIN      
        1 miwaqghdra igrggqmpwh lpedlaffrk mtsghpvimg rktwqslpqr yrplpgrtnv
       61 vvtrdpgfva dgallassve eavrlaeeaa ragadcagda aekadplvwi mggaqlyaag
      121 mefaegvvvt dvdvdvagad afapeitvdw evagvdpdrg whvgadgtry rmsvyrrrhs
      181 gfavnfpprp asqs
//
LOCUS       WP_235172806             478 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Trueperella
            pyogenes].
ACCESSION   WP_235172806
VERSION     WP_235172806.1
KEYWORDS    RefSeq.
SOURCE      Trueperella pyogenes
  ORGANISM  Trueperella pyogenes
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Actinomycetales; Actinomycetaceae; Trueperella.
REFERENCE   1  (residues 1 to 478)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 478)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 478)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 478)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Trueperella pyogenes"
                     /db_xref="taxon:1661"
     Protein         1..478
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=52206
     Region          6..>451
                     /region_name="Uup"
                     /note="ATPase components of ABC transporters with
                     duplicated ATPase domains [General function prediction
                     only]; COG0488"
                     /db_xref="CDD:440254"
ORIGIN      
        1 mpvikldnis fsylstplle svslhigdge raclvgpngc gkttllrias gdlppdsgvv
       61 svegvsrvpi idkfsgtvgd yldaalhplr iiaiqfdevs armgagaylg elgsnydrll
      121 aqmiahdiwm learaaqvla elgleeltea rrnrslntls pgqrgrlqla atlivkpevl
      181 imdeptnhld teavsfltqt vnnwggavlm ashdrafied tatviydmdv dawnaltkad
      241 gsdgvvglyr cagdysnylv ekasarrqha elhatqqtek rklhkhrqsa gkisrggvrl
      301 ataegkakkf fadraaatak rrmqnddkrl etltdqevrk prsydlsfhf eqplnrtgia
      361 vsarraavqq rlapisfdla hgehllvtsa ngsgkttlln wiftekppad arasgtimrg
      421 kpvslvpqhl pkntirdsph tsgetesekr gkasctrqcg rlpfqsyqqv tnaehksr
//
LOCUS       WP_235172598              95 aa            linear   BCT 02-MAR-2025
DEFINITION  GlpM family protein [Enterobacter cloacae].
ACCESSION   WP_235172598
VERSION     WP_235172598.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter cloacae
  ORGANISM  Enterobacter cloacae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 95)
  AUTHORS   Schweizer,H.P., Po,C. and Bacic,M.K.
  TITLE     Identification of Pseudomonas aeruginosa glpM, whose gene product
            is required for efficient alginate biosynthesis from various carbon
            sources
  JOURNAL   J Bacteriol 177 (16), 4801-4804 (1995)
   PUBMED   7642508
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018628.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06942.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Enterobacter cloacae"
                     /db_xref="taxon:550"
     Protein         1..95
                     /product="GlpM family protein"
                     /calculated_mol_wt=10221
     Region          1..95
                     /region_name="GlpM"
                     /note="Dual-topology membrane protein YdgC, GlpM family
                     [Function unknown]; COG3136"
                     /db_xref="CDD:442370"
ORIGIN      
        1 mglaikaalg alvvlligvl aktknyyiag liplfptfal iahyivaser gtealrttiv
       61 fgmwsiipyf lyllslwyft gflrlplalg gavvc
//
LOCUS       WP_235172887             288 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase [Rahnella perminowiae].
ACCESSION   WP_235172887
VERSION     WP_235172887.1
KEYWORDS    RefSeq.
SOURCE      Rahnella perminowiae
  ORGANISM  Rahnella perminowiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Rahnella.
REFERENCE   1  (residues 1 to 288)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Rahnella perminowiae"
                     /db_xref="taxon:2816244"
     Protein         1..288
                     /product="PfkB family carbohydrate kinase"
                     /calculated_mol_wt=30511
     Region          2..276
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
     Site            order(42,229,232)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238177"
     Site            order(182,200,227,230..231,234)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238177"
ORIGIN      
        1 mcvyvvgnit vdetwaiadi pakgssvhgn kisqdiggkg anqaillsrc ginttliaai
       61 gndlngrwiy ekihheplhh apeylfpcns dtslifncad gdnaiitttt aadslsieii
      121 tralvravpg dilllqgnfs fektrdllll gkkrgmttvf npspvrdgfs qlwpwvdiav
      181 lnqpeaeklq ptgvsnlvit qgargamlin asqqqfcpat palavdttga gdtflavmla
      241 sallrkteid alslthasla aaitvsrpgt csafpdvael ktllshrg
//
LOCUS       WP_235173142             222 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Rahnella
            perminowiae].
ACCESSION   WP_235173142
VERSION     WP_235173142.1
KEYWORDS    RefSeq.
SOURCE      Rahnella perminowiae
  ORGANISM  Rahnella perminowiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Rahnella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Rahnella perminowiae"
                     /db_xref="taxon:2816244"
     Protein         1..222
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=25855
     Region          1..181
                     /region_name="rcsA"
                     /note="transcriptional regulator RcsA; PRK15411"
                     /db_xref="CDD:185309"
     Region          134..183
                     /region_name="HTH_ARSR"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; cl46857"
                     /db_xref="CDD:481197"
     Site            order(135..137,150..152,160..161,163..164,166..170,181)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:99777"
ORIGIN      
        1 mkvciiepcg ftrlgifsyl vennsldiid tvnishslnl ipefepdiil vnmtinchta
       61 elseelktff efrhsariyc yvdahypnte tpiavtrevs ilnkqsltvl lqqiaedpea
      121 fmpinniglp ktllsdqeil vmsywmsemp nyriarklni ssrtvyvhkr hlaqkirvrn
      181 rlefcfiynl ikylfwpidd isatpisrqi kddlqmiykn ys
//
LOCUS       WP_235173291             337 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Rahnella perminowiae].
ACCESSION   WP_235173291
VERSION     WP_235173291.1
KEYWORDS    RefSeq.
SOURCE      Rahnella perminowiae
  ORGANISM  Rahnella perminowiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Rahnella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13407.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Rahnella perminowiae"
                     /db_xref="taxon:2816244"
     Protein         1..337
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=34709
     Region          27..314
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mkiscvfava atlftsatla gsnqnitigl itktdtnpff lkmkegamlg atvhgvrllt
       61 aagkedsdyp sqiiaiqsmv sagattllit psdakaivpa ldevrakgvq vialdsptdp
      121 isavdalfat dnykagelig qyaqaamplt fpgqplkiam ldlspghlvg arrhngfmkg
      181 lglpaagaet selsatpeiv csgysegaek qgyevmancl kthpdinlvy tvnepaaaga
      241 ykalqeagkq knalilsvdg gcagvnyvre gkiaataqqy pltmaamgvd aavayarhgk
      301 kvsgyvdtgv tliadkpmqg lpskdtqagl dacfgak
//
LOCUS       WP_235173413             268 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: inositol monophosphatase family protein [Rahnella].
ACCESSION   WP_235173413
VERSION     WP_235173413.1
KEYWORDS    RefSeq.
SOURCE      Rahnella
  ORGANISM  Rahnella
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae.
REFERENCE   1  (residues 1 to 268)
  AUTHORS   York,J.D., Ponder,J.W., Chen,Z.W., Mathews,F.S. and Majerus,P.W.
  TITLE     Crystal structure of inositol polyphosphate 1-phosphatase at 2.3-A
            resolution
  JOURNAL   Biochemistry 33 (45), 13164-13171 (1994)
   PUBMED   7947723
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012673.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00459.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Rahnella"
                     /db_xref="taxon:34037"
     Protein         1..268
                     /product="inositol monophosphatase family protein"
                     /calculated_mol_wt=28751
     Region          23..228
                     /region_name="FIG"
                     /note="FBPase/IMPase/glpX-like domain. A superfamily of
                     metal-dependent phosphatases with various substrates.
                     Fructose-1,6-bisphospatase (both the major and the
                     glpX-encoded variant) hydrolyze fructose-1,6,-bisphosphate
                     to fructose-6-phosphate in...; cl00289"
                     /db_xref="CDD:469707"
     Site            order(50,73..74,88..92,213)
                     /site_type="active"
                     /db_xref="CDD:238814"
ORIGIN      
        1 mmtnttmsar laiagqiaaq aaelalgffn rrdaievssk rtqdfvsead vaveqfirsq
       61 laqhfpqdav igeemggvlt dapcwvidpi dgtsnflrgs plwgvslglv enkkpligiv
      121 alpvlndlfa aesgkgifln gkpfrrddrf edvqivslgd ssddkldeas afyqglraad
      181 wsvhcyrctt vgmvfaakgi igghlqrrtt lwdiaggtvl cqeagldtvv kfastadgie
      241 dyrhmsvaag tadllsavip lwpgfepk
//
LOCUS       WP_235173733             498 aa            linear   BCT 02-MAR-2025
DEFINITION  PTS transporter subunit EIIC [Rahnella perminowiae].
ACCESSION   WP_235173733
VERSION     WP_235173733.1
KEYWORDS    RefSeq.
SOURCE      Rahnella perminowiae
  ORGANISM  Rahnella perminowiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Rahnella.
REFERENCE   1  (residues 1 to 498)
  AUTHORS   Reizer,J., Paulsen,I.T., Reizer,A., Titgemeyer,F. and Saier,M.H.
            Jr.
  TITLE     Novel phosphotransferase system genes revealed by bacterial genome
            analysis: the complete complement of pts genes in mycoplasma
            genitalium
  JOURNAL   Microb Comp Genomics 1 (3), 151-164 (1996)
   PUBMED   9689210
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02378.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Rahnella perminowiae"
                     /db_xref="taxon:2816244"
     Protein         1..498
                     /product="PTS transporter subunit EIIC"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /calculated_mol_wt=53859
     Region          7..489
                     /region_name="PTS-II-BC-glcB"
                     /note="PTS system, glucose-specific IIBC component;
                     TIGR02002"
                     /db_xref="CDD:273923"
ORIGIN      
        1 mnpltsfvks lsklsmigra lmlpisllpa aglllafgdr fhlplmmnag gvifdnlpll
       61 faigsavgla aesgiaalsa avsvltinvt mgtllhitpe maagggkyam vlgiptlqmg
      121 vfgglisgil aawcynkfnt lqlpeflgff sgkrfvaiat aflsfllgma lpwvwtyiqa
      181 gidglsvvvn gdnqvlstfi fgtveralip lglhhiwyps fwysfgeytt qsgqvihgdq
      241 tiwfkmleeg vktfssgsyq nagkfmqgef plmlfalpaa clamyheant knkkiasgil
      301 fsaaltcflt gitepveftf ifvapvlyvf navmaglsym cmylldahia ksfsaglidy
      361 isfgilpsln hyqthflsav ivgvpmaivy yftfrfvirr fdiktpgrtd vmvscddktd
      421 qeisqeiial lggqenivsv sacitrlrle vanselvnke glnrvgargv vfvgdkgiqv
      481 ifgaraqfia qtlsemav
//
LOCUS       WP_235173751             459 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Rahnella perminowiae].
ACCESSION   WP_235173751
VERSION     WP_235173751.1
KEYWORDS    RefSeq.
SOURCE      Rahnella perminowiae
  ORGANISM  Rahnella perminowiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Rahnella.
REFERENCE   1  (residues 1 to 459)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Rahnella perminowiae"
                     /db_xref="taxon:2816244"
     Protein         1..459
                     /product="AMP-binding protein"
                     /calculated_mol_wt=51226
     Region          62..459
                     /region_name="MenE/FadK"
                     /note="O-succinylbenzoic acid-CoA ligase MenE or related
                     acyl-CoA synthetase (AMP-forming) [Lipid transport and
                     metabolism]; COG0318"
                     /db_xref="CDD:440087"
ORIGIN      
        1 mdsqkasatp mtqrmcewls agradehlva wsesrewcqr dfrhdvlsll thisatshsr
       61 walclednys favallavly sghtpvlpgh frpavlagqr defdalitdl plqidcpilr
      121 fpfsadqplt alpewpenav lilftsgstg ksqkiikpvs clelesqwlc thwgeqcada
      181 rfvatvaphh myglsfafml pltlgrpfat krveyheqlh slarenalvl tsspaflkrl
      241 dmalepanlr hvfsaggpls hdtalrveni cgcrpteiyg ttesgivafr tqhqpeaawt
      301 lfdnlefspl adgnialisp lipqpdgmil sdkiqllnad qrqflllgrk drivkiaeqr
      361 islteieqrl camdllsdas vltlekqgrl yvaavlvlsq vgeqlfqvqg qavllgqirg
      421 ilrdwlspvs mprywrfapa iplnqqgkra taelqemfl
//
LOCUS       WP_235173861             375 aa            linear   BCT 02-MAR-2025
DEFINITION  YbfB/YjiJ family MFS transporter [Rahnella perminowiae].
ACCESSION   WP_235173861
VERSION     WP_235173861.1
KEYWORDS    RefSeq.
SOURCE      Rahnella perminowiae
  ORGANISM  Rahnella perminowiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Rahnella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018485.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06779.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Rahnella perminowiae"
                     /db_xref="taxon:2816244"
     Protein         1..375
                     /product="YbfB/YjiJ family MFS transporter"
                     /calculated_mol_wt=39792
     Region          14..370
                     /region_name="MFS_4"
                     /note="Uncharacterized MFS-type transporter YbfB;
                     pfam06779"
                     /db_xref="CDD:399632"
ORIGIN      
        1 mafrialsgf lafvvamgig rfaftpqvpl miaehqfslt gaglvaafny lgylcgafdg
       61 mraskhlerr lwlgvwggvi ltllsavisg evlhsivrfl igwtsgwamv mvsawcnerl
      121 ahygrpalsa avfagpgagi flsgmlavgi hslqltsaqa wcvygvlali fvaiitpnlp
      181 rkgdlhrshm assplvmtpa lkrlvwsysl agfgyilpat flsqmasarf pdslfaqfvw
      241 pvfggaavtg ivigiltrhc ltthtrlalt lwiqglgilc aevvpgvsgl vlgalltggg
      301 flsvvqlalq ysrelapdhs rymagllttg yavgqlfgpv lsaistalth rlepalyval
      361 agfiiagalv vrhkr
//
LOCUS       WP_235174011             327 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Rahnella
            perminowiae].
ACCESSION   WP_235174011
VERSION     WP_235174011.1
KEYWORDS    RefSeq.
SOURCE      Rahnella perminowiae
  ORGANISM  Rahnella perminowiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Rahnella.
REFERENCE   1  (residues 1 to 327)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Rahnella perminowiae"
                     /db_xref="taxon:2816244"
     Protein         1..327
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=36117
     Region          6..313
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(11,13..14,16,35..37,73..75,107..109,129,133,
                     159..162)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(86,109,129,133)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mksknkvlil gatggigsei arklirekwd vhalrrnapq neehgsmawv sgdalnaeqv
       61 aaaasecsvi vhavnppgyr nweklvlpml qntinaaern galivlpgtv ynygpdafpl
      121 lredspqnpv trkgairvqm ekalfayaqr ggkvlilrag dffgpdagnn wfsqgwikpg
      181 qrpriiknpg kvgtghqway lpdvaetlva llarrdqldp facfhmrghw dadgtamaga
      241 iqrvaqlagv nakvksfpww litamapfnt tlhemlemry lweqaiqmdn aklnyflghe
      301 phtplieavr ttligqgcin halftrm
//
LOCUS       WP_235173950             245 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail tube protein [Rahnella perminowiae].
ACCESSION   WP_235173950
VERSION     WP_235173950.1
KEYWORDS    RefSeq.
SOURCE      Rahnella perminowiae
  ORGANISM  Rahnella perminowiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Rahnella.
REFERENCE   1  (residues 1 to 245)
  AUTHORS   Campbell,P.L., Duda,R.L., Nassur,J., Conway,J.F. and Huet,A.
  TITLE     Mobile Loops and Electrostatic Interactions Maintain the Flexible
            Tail Tube of Bacteriophage Lambda
  JOURNAL   J Mol Biol 432 (2), 384-395 (2020)
   PUBMED   31711962
REFERENCE   2  (residues 1 to 245)
  AUTHORS   Pell,L.G., Cumby,N., Clark,T.E., Tuite,A., Battaile,K.P.,
            Edwards,A.M., Chirgadze,N.Y., Davidson,A.R. and Maxwell,K.L.
  TITLE     A conserved spiral structure for highly diverged phage tail
            assembly chaperones
  JOURNAL   J Mol Biol 425 (14), 2436-2449 (2013)
   PUBMED   23542344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027776.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16461.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Rahnella perminowiae"
                     /db_xref="taxon:2816244"
     Protein         1..245
                     /product="phage tail tube protein"
                     /calculated_mol_wt=25497
     Region          16..150
                     /region_name="Phage_TTP_12"
                     /note="Lambda phage tail tube protein, TTP; pfam16461"
                     /db_xref="CDD:406780"
     Region          161..239
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); cl02708"
                     /db_xref="CDD:445894"
ORIGIN      
        1 mttqleptkg agttlwiytg sgdpyanpls dqdwtrlaki keltpgemta esyddtyldd
       61 adadwngtaq gakssgdtsf tlawkpgesg qqdlvnwfyd gavrgykiry pntavdvfrg
      121 wisslgkavp vkevitrtvk itntgkpala esnqtaavpv tgvtvtpstt svvvgqnavi
      181 tvavlpdgat ngsfnvaaad ptvatltvsg ntvtakglka gttqlivmtn dvqkvaictl
      241 tvtaa
//
LOCUS       WP_235174435              39 aa            linear   BCT 02-MAR-2025
DEFINITION  VWA domain-containing protein [Tomitella biformata].
ACCESSION   WP_235174435
VERSION     WP_235174435.1
KEYWORDS    RefSeq.
SOURCE      Tomitella biformata
  ORGANISM  Tomitella biformata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Tomitella.
REFERENCE   1  (residues 1 to 39)
  AUTHORS   Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Ter-dependent stress response systems: novel pathways related to
            metal sensing, production of a nucleoside-like metabolite, and
            DNA-processing
  JOURNAL   Mol Biosyst 8 (12), 3142-3165 (2012)
   PUBMED   23044854
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021641.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10138.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..39
                     /organism="Tomitella biformata"
                     /db_xref="taxon:630403"
     Protein         1..39
                     /product="VWA domain-containing protein"
                     /calculated_mol_wt=4100
     Region          <3..38
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
ORIGIN      
        1 mlffavdnad aspdsrlygl llseyadwlr aaraagvla
//
LOCUS       WP_235174446             146 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2231 domain-containing protein [Tomitella biformata].
ACCESSION   WP_235174446
VERSION     WP_235174446.1
KEYWORDS    RefSeq.
SOURCE      Tomitella biformata
  ORGANISM  Tomitella biformata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Tomitella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021505.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09990.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Tomitella biformata"
                     /db_xref="taxon:630403"
     Protein         1..146
                     /product="DUF2231 domain-containing protein"
                     /calculated_mol_wt=15489
     Region          50..>146
                     /region_name="DUF2231"
                     /note="Predicted membrane protein (DUF2231); cl01730"
                     /db_xref="CDD:470316"
ORIGIN      
        1 msahkrsfel rdlvepatra serlewldrp syrlehvmal sfnmlggagr pvqsllngtp
       61 vghpvrpvla alpvgswtva laldaadala pyhfgfrega qvavavgvlg sagaavtglt
      121 dwqythdemr raglvhglvn rtalal
//
LOCUS       WP_235174517             200 aa            linear   BCT 02-MAR-2025
DEFINITION  CBS domain-containing protein [Tomitella biformata].
ACCESSION   WP_235174517
VERSION     WP_235174517.1
KEYWORDS    RefSeq.
SOURCE      Tomitella biformata
  ORGANISM  Tomitella biformata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Tomitella.
REFERENCE   1  (residues 1 to 200)
  AUTHORS   Scott,J.W., Hawley,S.A., Green,K.A., Anis,M., Stewart,G.,
            Scullion,G.A., Norman,D.G. and Hardie,D.G.
  TITLE     CBS domains form energy-sensing modules whose binding of adenosine
            ligands is disrupted by disease mutations
  JOURNAL   J Clin Invest 113 (2), 274-284 (2004)
   PUBMED   14722619
REFERENCE   2  (residues 1 to 200)
  AUTHORS   Kemp,B.E.
  TITLE     Bateman domains and adenosine derivatives form a binding contract
  JOURNAL   J Clin Invest 113 (2), 182-184 (2004)
   PUBMED   14722609
REFERENCE   3  (residues 1 to 200)
  AUTHORS   Janosik,M., Kery,V., Gaustadnes,M., Maclean,K.N. and Kraus,J.P.
  TITLE     Regulation of human cystathionine beta-synthase by
            S-adenosyl-L-methionine: evidence for two catalytically active
            conformations involving an autoinhibitory domain in the C-terminal
            region
  JOURNAL   Biochemistry 40 (35), 10625-10633 (2001)
   PUBMED   11524006
REFERENCE   4  (residues 1 to 200)
  AUTHORS   Zhang,R., Evans,G., Rotella,F.J., Westbrook,E.M., Beno,D.,
            Huberman,E., Joachimiak,A. and Collart,F.R.
  TITLE     Characteristics and crystal structure of bacterial
            inosine-5'-monophosphate dehydrogenase
  JOURNAL   Biochemistry 38 (15), 4691-4700 (1999)
   PUBMED   10200156
REFERENCE   5  (residues 1 to 200)
  AUTHORS   Ponting,C.P.
  TITLE     CBS domains in CIC chloride channels implicated in myotonia and
            nephrolithiasis (kidney stones)
  JOURNAL   J Mol Med (Berl) 75 (3), 160-163 (1997)
   PUBMED   9106071
REFERENCE   6  (residues 1 to 200)
  AUTHORS   Bateman,A.
  TITLE     The structure of a domain common to archaebacteria and the
            homocystinuria disease protein
  JOURNAL   Trends Biochem Sci 22 (1), 12-13 (1997)
   PUBMED   9020585
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012780.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00571.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Tomitella biformata"
                     /db_xref="taxon:630403"
     Protein         1..200
                     /product="CBS domain-containing protein"
                     /calculated_mol_wt=21288
     Region          1..114
                     /region_name="CBS"
                     /note="CBS domain [Signal transduction mechanisms];
                     COG0517"
                     /db_xref="CDD:440283"
     Region          129..196
                     /region_name="TrkA_C"
                     /note="TrkA-C domain; pfam02080"
                     /db_xref="CDD:460440"
ORIGIN      
        1 mttprlvldr dgtcgeaaeq mraarvpgap vvhrgqrfvg svrraeveaa dpatalrklv
       61 dptvptvpvd dnlddaldam hqghgwltvl dadrhvigil avrdivngyr aaverdvkrf
      121 dsvgsnvdlr evpvtsdspl vgqplgpesi psgvivltvl rnnevlqgsa llrfeqgdvv
      181 tllgqpdeld kvgrqlagsd
//
LOCUS       WP_235174626             305 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Tomitella biformata].
ACCESSION   WP_235174626
VERSION     WP_235174626.1
KEYWORDS    RefSeq.
SOURCE      Tomitella biformata
  ORGANISM  Tomitella biformata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Tomitella.
REFERENCE   1  (residues 1 to 305)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Tomitella biformata"
                     /db_xref="taxon:630403"
     Protein         1..305
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=34133
     Region          14..>303
                     /region_name="PRK05855"
                     /note="SDR family oxidoreductase"
                     /db_xref="CDD:235628"
ORIGIN      
        1 msqpklhvad npaapirrtv srdgydlavf eqgnpdgeti vmvhgwpdth hlwdgvvpql
       61 adryrvvtyd trghgestvp dkisgfrlee lskdlfavld avspdapvhv lahdwgsvqa
      121 wesvcepdah eriasftsvs gpnldhlgkw vrarfaqrkf lppltqlvss aytaffmtpv
      181 lprlffgavg rpgvwrrflr vlegtpaaqi hlaptfnkds vsglriysan ivqhvlhprd
      241 rhtevpvqll vnrrdiavrp aiyddadqwc tqltridlkt ghwlpfsnpt liahrtaafi
      301 eevks
//
LOCUS       WP_235174633              65 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF559 domain-containing protein [Tomitella biformata].
ACCESSION   WP_235174633
VERSION     WP_235174633.1
KEYWORDS    RefSeq.
SOURCE      Tomitella biformata
  ORGANISM  Tomitella biformata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Tomitella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016370.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04480.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Tomitella biformata"
                     /db_xref="taxon:630403"
     Protein         1..65
                     /product="DUF559 domain-containing protein"
                     /calculated_mol_wt=7400
     Region          <1..60
                     /region_name="MTES_1575"
                     /note="REase_MTES_1575; cl46272"
                     /db_xref="CDD:480612"
ORIGIN      
        1 mvveydgkdh wlsrtqrsrd idryqileel gwvvvrvdak llderpavtl lrirakltaa
       61 gvvlp
//
LOCUS       WP_235174688             174 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Tomitella biformata].
ACCESSION   WP_235174688
VERSION     WP_235174688.1
KEYWORDS    RefSeq.
SOURCE      Tomitella biformata
  ORGANISM  Tomitella biformata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Tomitella.
REFERENCE   1  (residues 1 to 174)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 174)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 174)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Tomitella biformata"
                     /db_xref="taxon:630403"
     Protein         1..174
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=18239
     Region          1..>168
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(62..63,66,93)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238347"
ORIGIN      
        1 mvpvwtgstd tgigvwaess ltgdrptala ngttdfsles vaaadpdvii avdnaidenh
       61 yeqlsgiapt vlhaadqtdw vlpwqdvttr vgaavglpek aaklvadtea gvtraradnp
      121 qfegksavli tvrpdgslra fspdaarfql ltqlgfvppa qlrttsrtar cpsm
//
LOCUS       WP_235174735             403 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome P450 [Tomitella biformata].
ACCESSION   WP_235174735
VERSION     WP_235174735.1
KEYWORDS    RefSeq.
SOURCE      Tomitella biformata
  ORGANISM  Tomitella biformata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Tomitella.
REFERENCE   1  (residues 1 to 403)
  AUTHORS   Werck-Reichhart,D. and Feyereisen,R.
  TITLE     Cytochromes P450: a success story
  JOURNAL   Genome Biol 1 (6), REVIEWS3003 (2000)
   PUBMED   11178272
REFERENCE   2  (residues 1 to 403)
  AUTHORS   Graham-Lorence,S., Amarneh,B., White,R.E., Peterson,J.A. and
            Simpson,E.R.
  TITLE     A three-dimensional model of aromatase cytochrome P450
  JOURNAL   Protein Sci 4 (6), 1065-1080 (1995)
   PUBMED   7549871
REFERENCE   3  (residues 1 to 403)
  AUTHORS   Degtyarenko,K.N. and Archakov,A.I.
  TITLE     Molecular evolution of P450 superfamily and P450-containing
            monooxygenase systems
  JOURNAL   FEBS Lett 332 (1-2), 1-8 (1993)
   PUBMED   8405421
REFERENCE   4  (residues 1 to 403)
  AUTHORS   Nelson,D.R., Kamataki,T., Waxman,D.J., Guengerich,F.P.,
            Estabrook,R.W., Feyereisen,R., Gonzalez,F.J., Coon,M.J.,
            Gunsalus,I.C., Gotoh,O. et al.
  TITLE     The P450 superfamily: update on new sequences, gene mapping,
            accession numbers, early trivial names of enzymes, and nomenclature
  JOURNAL   DNA Cell Biol 12 (1), 1-51 (1993)
   PUBMED   7678494
REFERENCE   5  (residues 1 to 403)
  AUTHORS   Guengerich,F.P.
  TITLE     Reactions and significance of cytochrome P-450 enzymes
  JOURNAL   J Biol Chem 266 (16), 10019-10022 (1991)
   PUBMED   2037557
REFERENCE   6  (residues 1 to 403)
  AUTHORS   Nebert,D.W. and Gonzalez,F.J.
  TITLE     P450 genes: structure, evolution, and regulation
  JOURNAL   Annu Rev Biochem 56, 945-993 (1987)
   PUBMED   3304150
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00067.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Tomitella biformata"
                     /db_xref="taxon:630403"
     Protein         1..403
                     /product="cytochrome P450"
                     /GO_function="GO:0004497 - monooxygenase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=44528
     Region          21..399
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(90,94,101,149,236..237,240..241,244..245,248,281,
                     290,292,315,343..345,349..353,356..357)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410700"
     Site            order(170..171,236,239..240,244,288..291)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410700"
ORIGIN      
        1 mtqalttvyd pfgdafqsnp ypayhelren dpvhrhaepg fwalsrfedi wtavrdnsaf
       61 ssesgltfyp deigqlglap tivmldpprh trlrsliakg ftphrvlsme plirefvrgr
      121 ldemaamiaq getvdlhgdf ssqiptfvla elfdlpeger dqfdpwvral tslqdsgfdi
      181 qaleakdava qmfgyfseli tarranpgdd misvlahael dgerltdwdi lgfcfvlvag
      241 gndttgnlis hgvmlldgdh aqrdrlvaep elipnallef lrlegsaqgl arttlkpvtv
      301 hgieipegek vmmlyasgnr dereygptag elditrripr hlgfssgvhf cigshlarlq
      361 grialeella rhpnvgvdld navrlksaft rgwtklpatg lss
//
LOCUS       WP_235174790             232 aa            linear   BCT 02-MAR-2025
DEFINITION  TrmH family RNA methyltransferase [Tomitella biformata].
ACCESSION   WP_235174790
VERSION     WP_235174790.1
KEYWORDS    RefSeq.
SOURCE      Tomitella biformata
  ORGANISM  Tomitella biformata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Tomitella.
REFERENCE   1  (residues 1 to 232)
  AUTHORS   Persson,B.C., Jager,G. and Gustafsson,C.
  TITLE     The spoU gene of Escherichia coli, the fourth gene of the spoT
            operon, is essential for tRNA (Gm18) 2'-O-methyltransferase
            activity
  JOURNAL   Nucleic Acids Res 25 (20), 4093-4097 (1997)
   PUBMED   9321663
REFERENCE   2  (residues 1 to 232)
  AUTHORS   Koonin,E.V. and Rudd,K.E.
  TITLE     SpoU protein of Escherichia coli belongs to a new family of
            putative rRNA methylases
  JOURNAL   Nucleic Acids Res 21 (23), 5519 (1993)
   PUBMED   8265370
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012797.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00588.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Tomitella biformata"
                     /db_xref="taxon:630403"
     Protein         1..232
                     /product="TrmH family RNA methyltransferase"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006396 - RNA processing [Evidence IEA]"
                     /calculated_mol_wt=25323
     Region          83..221
                     /region_name="SPOUT_MTase"
                     /note="SPOUT superfamily of SAM-dependent RNA
                     methyltransferases; cl38912"
                     /db_xref="CDD:476814"
     Site            order(156..158,178..181,197..199,208,210,213)
                     /site_type="other"
                     /note="SAM binding site [chemical binding]"
                     /db_xref="CDD:349952"
ORIGIN      
        1 mpqpisenpp pvpadpaagp tewnshpvgv gpwgeertdp lptdprydpe lladgdrrnv
       61 vdayrywtrg aivedidsrr hplhigienf ghdanigtvv rtanafaaaa vhivgrrrwn
      121 rrgamvtdry qhlehhedve qlmeyasahg levvavdnvp gsepiervel prnclllfgq
      181 egpgvsaeaq rqaaltvsia qfgstrsina gvaagivmht wvrqhadlaa aw
//
LOCUS       WP_235174905             225 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF559 domain-containing protein [Tomitella biformata].
ACCESSION   WP_235174905
VERSION     WP_235174905.1
KEYWORDS    RefSeq.
SOURCE      Tomitella biformata
  ORGANISM  Tomitella biformata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Tomitella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016370.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04480.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Tomitella biformata"
                     /db_xref="taxon:630403"
     Protein         1..225
                     /product="DUF559 domain-containing protein"
                     /calculated_mol_wt=25130
     Region          <4..101
                     /region_name="AbiEi"
                     /note="Abortive phage infection protein AbiEi, antitoxin
                     conponent of an AbiEi-AbiEii TA system [Defense
                     mechanisms]; COG5340"
                     /db_xref="CDD:444124"
     Region          97..202
                     /region_name="MTES_1575"
                     /note="REase_MTES_1575; cl46272"
                     /db_xref="CDD:480612"
ORIGIN      
        1 maevlrrgrr ksvpginvrs eavlsheivi ldgmrvtsaa rtafdlgrwl ehddavemid
       61 alcnaaklnv vdilevadgh pgvrglrklr svlrvvdgga espaetrtrl vlvraglptp
      121 ntqvsvfdrf gqfvarcdlg wecwrvvvey dgeghwssea rrtrdirryr qlerlgwrvv
      181 rvnsgllres pgdvienvre qllaagadls elqslddlel eraed
//
LOCUS       WP_235174500             318 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA glycosylase AlkZ-like family protein [Tomitella biformata].
ACCESSION   WP_235174500
VERSION     WP_235174500.1
KEYWORDS    RefSeq.
SOURCE      Tomitella biformata
  ORGANISM  Tomitella biformata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Tomitella.
REFERENCE   1  (residues 1 to 318)
  AUTHORS   Bradley,N.P., Washburn,L.A., Christov,P.P., Watanabe,C.M.H. and
            Eichman,B.F.
  TITLE     Escherichia coli YcaQ is a DNA glycosylase that unhooks DNA
            interstrand crosslinks
  JOURNAL   Nucleic Acids Res 48 (13), 7005-7017 (2020)
   PUBMED   32409837
REFERENCE   2  (residues 1 to 318)
  AUTHORS   Mullins,E.A., Warren,G.M., Bradley,N.P. and Eichman,B.F.
  TITLE     Structure of a DNA glycosylase that unhooks interstrand cross-links
  JOURNAL   Proc Natl Acad Sci U S A 114 (17), 4400-4405 (2017)
   PUBMED   28396405
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017984.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06224.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Tomitella biformata"
                     /db_xref="taxon:630403"
     Protein         1..318
                     /product="DNA glycosylase AlkZ-like family protein"
                     /GO_function="GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA]"
                     /GO_process="GO:0036297 - interstrand cross-link repair
                     [Evidence IEA]"
                     /calculated_mol_wt=34558
     Region          26..307
                     /region_name="HTH_42"
                     /note="Winged helix DNA-binding domain; cl19833"
                     /db_xref="CDD:473220"
ORIGIN      
        1 mfpwpgpcaa prtctaphrt aqlsgiaiat apfsepdaak rvfdaskplk aagipvltal
       61 rnvahqmrei aaepivkgam staltaalpa pylrfcrpcd athpyempfr laalhaglrl
      121 qpgtsppvle ripgwtfspy ellaehalap lnvirnylrf ygpatvkqva afidcpakev
      181 kahwprdtvn vavvgesevr salassldll isrpnpegai rlmgpydpyl qlkdraslvq
      241 deplrkslwp vlgrpgaiac daevlgtwrp rtkgksltlr lvlwepeqag palwseletq
      301 gqdladfrgl efagwadk
//
LOCUS       WP_235174944             552 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF222 domain-containing protein [Tomitella biformata].
ACCESSION   WP_235174944
VERSION     WP_235174944.1
KEYWORDS    RefSeq.
SOURCE      Tomitella biformata
  ORGANISM  Tomitella biformata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Tomitella.
REFERENCE   1  (residues 1 to 552)
  AUTHORS   Davis,E.O., Dullaghan,E.M. and Rand,L.
  TITLE     Definition of the mycobacterial SOS box and use to identify
            LexA-regulated genes in Mycobacterium tuberculosis
  JOURNAL   J Bacteriol 184 (12), 3287-3295 (2002)
   PUBMED   12029045
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014741.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02720.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Tomitella biformata"
                     /db_xref="taxon:630403"
     Protein         1..552
                     /product="DUF222 domain-containing protein"
                     /calculated_mol_wt=59531
     Region          65..277
                     /region_name="DUF222"
                     /note="Domain of unknown function (DUF222); pfam02720"
                     /db_xref="CDD:397024"
ORIGIN      
        1 messalppad tvsvaglidn irgrdhrqsr laweiytdie rihaltldrp peldtrvfdh
       61 fanssallga vnhidkshad alvnealalv hripltglcl ydgiinqrqf qllvsvtdlv
      121 dgwpsapdvd kqiakdlqdn gpgstrrlrd ltkraifahd pdavrrraeq ararrtatvr
      181 prpdgmahlg itapaedaql amaavealia aaicphdprk knarrsdaam ntlqgiplvc
      241 qcgredctat prgagmsdlh arivvhvicq dgtlggdshd gggpdeggpq dspdggpgse
      301 dpggdgsddg pgddgpsddg phnsgpecgg daerpgfldg ygvitadhvr aiaqrpdaii
      361 rplnpkpgqa lpthqpgdpy rfsaaldtfi rardgycvfa gcnkpawacd ldhvdefnhd
      421 dpaaggqtsa gganakcryh hliktfgewl ddqfvdadgr trvtvtspdg vtiegrghtn
      481 emlfpalrtv rfqkppprgp ttpaaddpnn gsgprrtrtr tadkharrrr erelnrrfre
      541 lhdfgpppdd rr
//
LOCUS       WP_235175133             236 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase large subunit domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_235175133
VERSION     WP_235175133.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 236)
  AUTHORS   Baumann,R.G. and Black,L.W.
  TITLE     Isolation and characterization of T4 bacteriophage gp17 terminase,
            a large subunit multimer with enhanced ATPase activity
  JOURNAL   J Biol Chem 278 (7), 4618-4627 (2003)
   PUBMED   12466275
REFERENCE   2  (residues 1 to 236)
  AUTHORS   Lang,A.S., Taylor,T.A. and Beatty,J.T.
  TITLE     Evolutionary implications of phylogenetic analyses of the gene
            transfer agent (GTA) of Rhodobacter capsulatus
  JOURNAL   J Mol Evol 55 (5), 534-543 (2002)
   PUBMED   12399927
REFERENCE   3  (residues 1 to 236)
  AUTHORS   Mitchell,M.S., Matsuzaki,S., Imai,S. and Rao,V.B.
  TITLE     Sequence analysis of bacteriophage T4 DNA packaging/terminase genes
            16 and 17 reveals a common ATPase center in the large subunit of
            viral terminases
  JOURNAL   Nucleic Acids Res 30 (18), 4009-4021 (2002)
   PUBMED   12235385
REFERENCE   4  (residues 1 to 236)
  AUTHORS   Lang,A.S. and Beatty,J.T.
  TITLE     The gene transfer agent of Rhodobacter capsulatus and 'constitutive
            transduction' in prokaryotes
  JOURNAL   Arch Microbiol 175 (4), 241-249 (2001)
   PUBMED   11382219
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015211.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03237.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>236
                     /product="terminase large subunit domain-containing
                     protein"
     Region          2..>236
                     /region_name="YjcR"
                     /note="Uncharacterized conserved protein YjcR, contains
                     N-terminal HTH domain [Function unknown]; COG5484"
                     /db_xref="CDD:444235"
ORIGIN      
        1 gkkgrakklk nhftpeqiaa lrekiisrle whqrswfdsl tlcreagirn rmilksrqig
       61 atwyfaqeal lmalrddvaq pyqrnqifls asrrqafqfk siiqkaaaev dvelkggdki
      121 ilsngaelhf lgtsaasaqs ytgnfyfdef fwvsrfaelr kvagamatls glrrtyfstp
      181 stetheayay wngdrwnekk athkrqrfsv dwktlhngli cpdrtwrqiv tledvv
//
LOCUS       WP_235175138             363 aa            linear   BCT 02-MAR-2025
DEFINITION  replication endonuclease, partial [Escherichia coli].
ACCESSION   WP_235175138
VERSION     WP_235175138.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 363)
  AUTHORS   Esposito,D. and Scocca,J.J.
  TITLE     Identification of an HP1 phage protein required for site-specific
            excision
  JOURNAL   Mol Microbiol 13 (4), 685-695 (1994)
   PUBMED   7997180
REFERENCE   2  (residues 1 to 363)
  AUTHORS   Liu,Y., Saha,S. and Haggard-Ljungquist,E.
  TITLE     Studies of bacteriophage P2 DNA replication. The DNA sequence of
            the cis-acting gene A and ori region and construction of a P2
            mini-chromosome
  JOURNAL   J Mol Biol 231 (2), 361-374 (1993)
   PUBMED   8510152
REFERENCE   3  (residues 1 to 363)
  AUTHORS   Hsu,M.Y., Inouye,M. and Inouye,S.
  TITLE     Retron for the 67-base multicopy single-stranded DNA from
            Escherichia coli: a potential transposable element encoding both
            reverse transcriptase and Dam methylase functions
  JOURNAL   Proc Natl Acad Sci U S A 87 (23), 9454-9458 (1990)
   PUBMED   1701261
REFERENCE   4  (residues 1 to 363)
  AUTHORS   van Mansfeld,A.D., van Teeffelen,H.A., Baas,P.D. and Jansz,H.S.
  TITLE     Two juxtaposed tyrosyl-OH groups participate in phi X174 gene A
            protein catalysed cleavage and ligation of DNA
  JOURNAL   Nucleic Acids Res 14 (10), 4229-4238 (1986)
   PUBMED   2940511
REFERENCE   5  (residues 1 to 363)
  AUTHORS   Ikeda,J.E., Yudelevich,A., Shimamoto,N. and Hurwitz,J.
  TITLE     Role of polymeric forms of the bacteriophage phi X174 coded gene A
            protein in phi XRFI DNA cleavage
  JOURNAL   J Biol Chem 254 (19), 9416-9428 (1979)
   PUBMED   158588
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017640.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05840.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>363
                     /product="replication endonuclease"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
     Region          <1..107
                     /region_name="Phage_GPA"
                     /note="Bacteriophage replication gene A protein (GPA);
                     cl15276"
                     /db_xref="CDD:353932"
ORIGIN      
        1 rdssdylvnt ffaavrkkln rdglrwygir tvephhdgtv hwhmmvfahp eeidtivsht
       61 rdiaiqedrh elgdditprf kaeyvdgskg tptsyiatyi gknldsravd gidpktgkpr
      121 vdhetgksma esveraigwa rlhrvrqfqf fgipsrqvwr elrrlasqma rnpegpqrlk
      181 ddamdavlaa adagcfatyi ekqggvlvpr kdylirtayd ladelndyge qsvqiygiws
      241 pligessrvc thpdnwklvr rkpepednah engfdlqggp aaswtrgnnc prvqetdnng
      301 tkqpeerpap wpqlpdgvdv dewmrslkrh erralmrslr dkqaknssde mqswtqsrkq
      361 qrp
//
LOCUS       WP_235175146              91 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4761 family protein, partial [Escherichia coli].
ACCESSION   WP_235175146
VERSION     WP_235175146.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027288.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15958.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>91
                     /product="DUF4761 family protein"
     Region          9..>91
                     /region_name="DUF4761"
                     /note="Domain of unknown function (DUF4761); pfam15958"
                     /db_xref="CDD:318223"
ORIGIN      
        1 mkqqrnsrfr ngaerhanrf atsasrsnir yslsdthatp dgypvkqige hawliekagi
       61 vihkcprnpf tgnrifalss gdnqfgqdft l
//
LOCUS       WP_235175166              26 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1133 family protein, partial [Escherichia coli].
ACCESSION   WP_235175166
VERSION     WP_235175166.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06576.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..26
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>26
                     /product="DUF1133 family protein"
ORIGIN      
        1 miyptntgks gehlrlttle svwiqg
//
LOCUS       WP_235175171             381 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3383 family protein [Escherichia coli].
ACCESSION   WP_235175171
VERSION     WP_235175171.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023291.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11863.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..381
                     /product="DUF3383 family protein"
                     /calculated_mol_wt=41205
     Region          7..379
                     /region_name="DUF3383"
                     /note="Protein of unknown function (DUF3383); pfam11863"
                     /db_xref="CDD:432140"
ORIGIN      
        1 maqglpvsnv vnvdvimspr aasgrnfgal lilgpstiip vserirrysa aedigkdfgv
       61 espeykaaqv ffsqspktqe vfvgrwvktk gdseqatpet leqavnamld ytswyglgia
      121 ddedipnadw lkvaaaiess svsrilaitt sddkclqtas sddlasklkt agysrsfiqy
      181 ssgnkyaals afgraftvnf ngsntaitlk fkqepgvgye tltvsqasal dakncnvfvy
      241 yqndtailqq gvmangdffd erhgldwlqn yvqtnlynll ytsttkvpqt eagitrllsn
      301 veksldqavq ngliapgvwn ggdlgqlssg dtlpkgyyvy aqpldeqaqs erearkapvi
      361 qaaiklagav hyadvqinvv r
//
LOCUS       WP_235175176              76 aa            linear   BCT 02-MAR-2025
DEFINITION  porin, partial [Escherichia coli].
ACCESSION   WP_235175176
VERSION     WP_235175176.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012489.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00267.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..76
                     /product="porin"
                     /GO_component="GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /GO_process="GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
     Region          <1..76
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 fdfglrpsia ytkskakdve gigdvdlvny fevgatyyfn knmstyvdyi inqidsdnkl
       61 gvgsddtvav givyqf
//
LOCUS       WP_235175241              91 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA-packaging protein FI, partial [Escherichia coli].
ACCESSION   WP_235175241
VERSION     WP_235175241.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 91)
  AUTHORS   Smith,M.P. and Feiss,M.
  TITLE     Sites and gene products involved in lambdoid phage DNA packaging
  JOURNAL   J Bacteriol 175 (8), 2393-2399 (1993)
   PUBMED   8468297
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025366.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14000.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     gene            1..>91
                     /gene="gpFI"
     Protein         1..>91
                     /product="DNA-packaging protein FI"
     Region          2..>91
                     /region_name="Packaging_FI"
                     /note="DNA packaging protein FI; pfam14000"
                     /db_xref="CDD:290707"
ORIGIN      
        1 mtkdeliarl rslgeqlnrd vsltgtkeel alrvaeleee lddtddaagq dtsvspenal
       61 tghenevvsa qpdtviqdta alvtvvalvt l
//
LOCUS       WP_235175277             130 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Escherichia coli].
ACCESSION   WP_235175277
VERSION     WP_235175277.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00872.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>130
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          2..>117
                     /region_name="Transposase_mut"
                     /note="Transposase, Mutator family; cl27632"
                     /db_xref="CDD:474953"
ORIGIN      
        1 mdekqlqala neqaknlktp edlsqfdrll kkisveaaln aemshhlgyd knqpkpgans
       61 rngystktvi tgdgplelrt prdrdgsfep qlvkknqtri tgmdnqilsl yakglttvsv
      121 qpepsgqnlt
//
LOCUS       WP_235175322             152 aa            linear   BCT 02-MAR-2025
DEFINITION  ESPR-type extended signal peptide-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_235175322
VERSION     WP_235175322.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 152)
  AUTHORS   Leyton,D.L., Rossiter,A.E. and Henderson,I.R.
  TITLE     From self sufficiency to dependence: mechanisms and factors
            important for autotransporter biogenesis
  JOURNAL   Nat Rev Microbiol 10 (3), 213-225 (2012)
   PUBMED   22337167
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 152)
  AUTHORS   Desvaux,M., Scott-Tucker,A., Turner,S.M., Cooper,L.M., Huber,D.,
            Nataro,J.P. and Henderson,I.R.
  TITLE     A conserved extended signal peptide region directs
            posttranslational protein translocation via a novel mechanism
  JOURNAL   Microbiology (Reading) 153 (Pt 1), 59-70 (2007)
   PUBMED   17185535
REFERENCE   3  (residues 1 to 152)
  AUTHORS   Desvaux,M., Cooper,L.M., Filenko,N.A., Scott-Tucker,A.,
            Turner,S.M., Cole,J.A. and Henderson,I.R.
  TITLE     The unusual extended signal peptide region of the type V secretion
            system is phylogenetically restricted
  JOURNAL   FEMS Microbiol Lett 264 (1), 22-30 (2006)
   PUBMED   17020545
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024418.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13018.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>152
                     /product="ESPR-type extended signal peptide-containing
                     protein"
     Region          1..>152
                     /region_name="auto_Ag43"
                     /note="Ag43/Cah family autotransporter adhesin; NF033177"
                     /db_xref="CDD:467980"
ORIGIN      
        1 mkrhlntcyr lvwnhmtgaf vvaselarar gkrggvaval slaavtslpv laadivvhpg
       61 etvnggtlan hdnqivfgtt ngmtistgle ygpdneantg gqwvqdggta nkttvtsggl
      121 qrvnpggsvs dtvisagggq slqgravntt ln
//
LOCUS       WP_235175326             715 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Xanthomonas arboricola].
ACCESSION   WP_235175326
VERSION     WP_235175326.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 715)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 715)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 715)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 715)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..715
                     /product="ATP-binding protein"
                     /calculated_mol_wt=76622
     Region          <167..698
                     /region_name="TMAO_torS"
                     /note="TMAO reductase sytem sensor TorS; TIGR02956"
                     /db_xref="CDD:274362"
ORIGIN      
        1 mnrpdsehgq aivrivlisl ilsyvlvpsv rhslplhqht gvlvivltgl glglalfgwl
       61 lwrpdrsdar rilgmladyg lmaagmiqmg eplawvyvvv mwvtvgnglr ygnrylylav
      121 amavvsfstt lsmteywqrn qrlgvglavg laavplyfss llrqltrata earraseaks
      181 rflanmshef rtplnglsgm tevlattqld deqreclkti qastrsllal veevldisai
      241 eagklrinas dfavhdtlqa iglilepqak akglryqati aadvpprvhg daghlqqill
      301 nlvgnavkft dhgsvqlkva ateasgragv llrfevldtg igvpvdmrpr lfeafeqadt
      361 glarrfegsg lgttiarglv qsmggaigfe enpeggslfw felpfglata kpaatpspvl
      421 hetesttipg nviafadpfl rhrarvrsmq ilvaddhlan rlvlqrllqk aghrvtcvdg
      481 geavldalae adydaaivdl hmpgvsgldm lkqlrvmqag gkpgtpivvl sadvtpesir
      541 sceqagayaf lakpvaaikl ldtlaeiavn qklrqtdlsi gtrsaapsga vldpavldel
      601 aelgmgnefe refiqqclsd aaacvvqlgk aaadgdwagl rehahavkgv ssnlglvmla
      661 eqggelmrlp eaqlraewsq rleqlknglk lgrealaqra qnksdggvsg ngdrg
//
LOCUS       WP_235175327             451 aa            linear   BCT 02-MAR-2025
DEFINITION  AIDA repeat-containing protein, partial [Escherichia coli].
ACCESSION   WP_235175327
VERSION     WP_235175327.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 451)
  AUTHORS   Selkrig,J., Mosbahi,K., Webb,C.T., Belousoff,M.J., Perry,A.J.,
            Wells,T.J., Morris,F., Leyton,D.L., Totsika,M., Phan,M.D.,
            Celik,N., Kelly,M., Oates,C., Hartland,E.L., Robins-Browne,R.M.,
            Ramarathinam,S.H., Purcell,A.W., Schembri,M.A., Strugnell,R.A.,
            Henderson,I.R., Walker,D. and Lithgow,T.
  TITLE     Discovery of an archetypal protein transport system in bacterial
            outer membranes
  JOURNAL   Nat Struct Mol Biol 19 (5), 506-510,S1 (2012)
   PUBMED   22466966
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 451)
  AUTHORS   Fang,Y., Ngeleka,M., Middleton,D.M. and Simko,E.
  TITLE     Characterization and immuno-detection of AIDA-I adhesin isolated
            from porcine Escherichia coli
  JOURNAL   Vet Microbiol 109 (1-2), 65-73 (2005)
   PUBMED   15950405
REFERENCE   3  (residues 1 to 451)
  AUTHORS   Sherlock,O., Schembri,M.A., Reisner,A. and Klemm,P.
  TITLE     Novel roles for the AIDA adhesin from diarrheagenic Escherichia
            coli: cell aggregation and biofilm formation
  JOURNAL   J Bacteriol 186 (23), 8058-8065 (2004)
   PUBMED   15547278
REFERENCE   4  (residues 1 to 451)
  AUTHORS   Farthing,M.J.
  TITLE     Bugs and the gut: an unstable marriage
  JOURNAL   Best Pract Res Clin Gastroenterol 18 (2), 233-239 (2004)
   PUBMED   15123066
REFERENCE   5  (residues 1 to 451)
  AUTHORS   Benz,I. and Schmidt,M.A.
  TITLE     AIDA-I, the adhesin involved in diffuse adherence of the
            diarrhoeagenic Escherichia coli strain 2787 (O126:H27), is
            synthesized via a precursor molecule
  JOURNAL   Mol Microbiol 6 (11), 1539-1546 (1992)
   PUBMED   1625582
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027494.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16168.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>451
                     /product="AIDA repeat-containing protein"
     Region          <1..>451
                     /region_name="auto_Ag43"
                     /note="Ag43/Cah family autotransporter adhesin; NF033177"
                     /db_xref="CDD:467980"
     Region          247..437
                     /region_name="PL2_Passenger_AT"
                     /note="Pertactin-like passenger domains (virulence
                     factors), C-terminal, subgroup 2, of autotransporter
                     proteins of the type V secretion system of Gram-negative
                     bacteria. This subgroup includes the passenger domains of
                     the nonprotease autotransporters, Ag43; cd01344"
                     /db_xref="CDD:238654"
ORIGIN      
        1 nsdgwqivkn ggvagnttvn qkgrlqvdag gtatnvtlkq ggalvtstaa tvtginrlga
       61 fsvvegkadn vvlenggrld vltghtatnt rvddggtldv rnggtattvs mgnggvllad
      121 sgaavsgtrs dgkafsiggg qadalmlekg ssftlnagdt atdttvnggl ftarggtlag
      181 tttlnngail tlsgktvnnd tltiregdal lqggsltgng sveksgsgtl tvsnttltqk
      241 avnlnegtlt lndstvttdv iaqrgtalkl tgstvlngai dptnvtlasg atwnipdnat
      301 vqsvvddlsh agqihftstr tgkfvpatlk vknlngqngt islrvrpdma qnnadrlvid
      361 ggratgktil nlvnagnsas glatsgkgiq vveaingatt eegafvqgnr lqagafnysl
      421 nrdsdeswyl rsenayrsev plyasmltqa m
//
LOCUS       WP_235175329             251 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Escherichia coli].
ACCESSION   WP_235175329
VERSION     WP_235175329.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 251)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 251)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..251
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          <1..245
                     /region_name="Phage_GPD"
                     /note="Phage tail baseplate hub (GPD); cl42073"
                     /db_xref="CDD:455418"
ORIGIN      
        1 vkrevswhdv tvervvsaia hryglkpqis emlmdieidh adqteesdms fltrmaemlg
       61 aittvksgnl lfimpgggvn aqgqplpsfa itrssgdrhq friadreayt gvraywldln
      121 ygkkkkvsvk rrkppkpkke ksssregdym egaegnvfvl rktyqneqaa rraaaakwqq
      181 lqrgaasfsi tlargraely pemhgtvtgf kseidnqdwi iakaehtidn sgfttqlele
      241 akipewiaet e
//
LOCUS       WP_235175349             384 aa            linear   BCT 02-MAR-2025
DEFINITION  XVIPCD domain-containing protein [Xanthomonas arboricola].
ACCESSION   WP_235175349
VERSION     WP_235175349.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 384)
  AUTHORS   Oka,G.U., Souza,D.P., Cenens,W., Matsuyama,B.Y., Cardoso,M.V.C.,
            Oliveira,L.C., da Silva Lima,F., Cuccovia,I.M., Guzzo,C.R.,
            Salinas,R.K. and Farah,C.S.
  TITLE     Structural basis for effector recognition by an antibacterial type
            IV secretion system
  JOURNAL   Proc Natl Acad Sci U S A 119 (1) (2022)
   PUBMED   34983846
REFERENCE   2  (residues 1 to 384)
  AUTHORS   Souza,D.P., Oka,G.U., Alvarez-Martinez,C.E., Bisson-Filho,A.W.,
            Dunger,G., Hobeika,L., Cavalcante,N.S., Alegria,M.C., Barbosa,L.R.,
            Salinas,R.K., Guzzo,C.R. and Farah,C.S.
  TITLE     Bacterial killing via a type IV secretion system
  JOURNAL   Nat Commun 6, 6453 (2015)
   PUBMED   25743609
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 384)
  AUTHORS   Alegria,M.C., Souza,D.P., Andrade,M.O., Docena,C., Khater,L.,
            Ramos,C.H., da Silva,A.C. and Farah,C.S.
  TITLE     Identification of new protein-protein interactions involving the
            products of the chromosome- and plasmid-encoded type IV secretion
            loci of the phytopathogen Xanthomonas axonopodis pv. citri
  JOURNAL   J Bacteriol 187 (7), 2315-2325 (2005)
   PUBMED   15774874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042736.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20410.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..384
                     /product="XVIPCD domain-containing protein"
                     /calculated_mol_wt=40944
     Region          248..353
                     /region_name="DUF6696"
                     /note="Domain of unknown function (DUF6696); pfam20410"
                     /db_xref="CDD:466559"
ORIGIN      
        1 megneeskip qpkqvgassa gapptsplkd paltpflvqs ptlqaglsql krdgigvvwg
       61 nagggtyivp dkeividqna sgkggrlaas lsheighhrf aeppdysskq ayvnnmlrge
      121 aaatlsnalv rreilnnqgp digiagsgnr pqqyeaiadq qmagritrna alnqiaqifk
      181 teqpsvgpsk tyeqyygdyy dkhivpwklk qgrpepgavs diassdvkqg glgpespltp
      241 pktpllpsqp ghadhtlyqq iksgvmqlda qhgkewdgas qrmtasllal akeeglsrvd
      301 hvvlnnptgq laggekvfvv qgalndpahq rahmptvdav qapenqsfdr vqainqtqaq
      361 areqqqaleq sqqavtqpgp siar
//
LOCUS       WP_235175391             199 aa            linear   BCT 02-MAR-2025
DEFINITION  GPO family capsid scaffolding protein, partial [Escherichia coli].
ACCESSION   WP_235175391
VERSION     WP_235175391.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 199)
  AUTHORS   Chang,J.R., Spilman,M.S., Rodenburg,C.M. and Dokland,T.
  TITLE     Functional domains of the bacteriophage P2 scaffolding protein:
            identification of residues involved in assembly and protease
            activity
  JOURNAL   Virology 384 (1), 144-150 (2009)
   PUBMED   19064277
REFERENCE   2  (residues 1 to 199)
  AUTHORS   Linderoth,N.A., Ziermann,R., Haggard-Ljungquist,E., Christie,G.E.
            and Calendar,R.
  TITLE     Nucleotide sequence of the DNA packaging and capsid synthesis genes
            of bacteriophage P2
  JOURNAL   Nucleic Acids Res 19 (25), 7207-7214 (1991)
   PUBMED   1837355
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017716.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05929.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>199
                     /product="GPO family capsid scaffolding protein"
                     /GO_process="GO:0019069 - viral capsid assembly [Evidence
                     IEA]"
     Region          6..>199
                     /region_name="Phage_GPO"
                     /note="Phage capsid scaffolding protein (GPO) serine
                     peptidase; cl15838"
                     /db_xref="CDD:449598"
ORIGIN      
        1 kktsrkkfrv avsgstvdgr eispvhlrea aenfnpdvya arvnvehyls pcpssefsam
       61 gdvtalsted itegplagrt alyaeiepte rmkqlvadgk kiyssielhp qfsvngrayl
      121 vglamtdtpa slgterlkft aqqrqavmtf nsiqgeapli seaieseiie maeqrqeegt
      181 qwfnrvmgii grgrkadda
//
LOCUS       WP_235175418             301 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2884 family protein [Xanthomonas arboricola].
ACCESSION   WP_235175418
VERSION     WP_235175418.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022551.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11101.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..301
                     /product="DUF2884 family protein"
                     /calculated_mol_wt=33459
     Region          51..263
                     /region_name="DUF2884"
                     /note="Protein of unknown function (DUF2884); cl19726"
                     /db_xref="CDD:450346"
ORIGIN      
        1 mrnasttaar smrillwlal lpavvsphar aqqtdkhdap rhraqvssqq cglgtsfnvl
       61 adsggiwlyr dsdwpreiff hggelsidhk lqqtstadar rlwemeqrtr almpqvagia
      121 yqvidlsyda lggvievmtg salnarkier lrkrarayvd gtlgkgrweq kafggsfany
      181 veheaeqfkg siarhmlwqi vtgrsdgidk raqqmegqld arldaqasti eananalctq
      241 vqalrqlqda lefryqgkrl qlfaplqndt prhdteqaep ksdtgdappn ravklqpatn
      301 s
//
LOCUS       WP_235175432             109 aa            linear   BCT 02-MAR-2025
DEFINITION  AIDA repeat-containing protein, partial [Escherichia coli].
ACCESSION   WP_235175432
VERSION     WP_235175432.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 109)
  AUTHORS   Selkrig,J., Mosbahi,K., Webb,C.T., Belousoff,M.J., Perry,A.J.,
            Wells,T.J., Morris,F., Leyton,D.L., Totsika,M., Phan,M.D.,
            Celik,N., Kelly,M., Oates,C., Hartland,E.L., Robins-Browne,R.M.,
            Ramarathinam,S.H., Purcell,A.W., Schembri,M.A., Strugnell,R.A.,
            Henderson,I.R., Walker,D. and Lithgow,T.
  TITLE     Discovery of an archetypal protein transport system in bacterial
            outer membranes
  JOURNAL   Nat Struct Mol Biol 19 (5), 506-510,S1 (2012)
   PUBMED   22466966
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 109)
  AUTHORS   Fang,Y., Ngeleka,M., Middleton,D.M. and Simko,E.
  TITLE     Characterization and immuno-detection of AIDA-I adhesin isolated
            from porcine Escherichia coli
  JOURNAL   Vet Microbiol 109 (1-2), 65-73 (2005)
   PUBMED   15950405
REFERENCE   3  (residues 1 to 109)
  AUTHORS   Sherlock,O., Schembri,M.A., Reisner,A. and Klemm,P.
  TITLE     Novel roles for the AIDA adhesin from diarrheagenic Escherichia
            coli: cell aggregation and biofilm formation
  JOURNAL   J Bacteriol 186 (23), 8058-8065 (2004)
   PUBMED   15547278
REFERENCE   4  (residues 1 to 109)
  AUTHORS   Farthing,M.J.
  TITLE     Bugs and the gut: an unstable marriage
  JOURNAL   Best Pract Res Clin Gastroenterol 18 (2), 233-239 (2004)
   PUBMED   15123066
REFERENCE   5  (residues 1 to 109)
  AUTHORS   Benz,I. and Schmidt,M.A.
  TITLE     AIDA-I, the adhesin involved in diffuse adherence of the
            diarrhoeagenic Escherichia coli strain 2787 (O126:H27), is
            synthesized via a precursor molecule
  JOURNAL   Mol Microbiol 6 (11), 1539-1546 (1992)
   PUBMED   1625582
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027494.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16168.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>109
                     /product="AIDA repeat-containing protein"
     Region          1..>109
                     /region_name="auto_Ag43"
                     /note="Ag43/Cah family autotransporter adhesin; NF033177"
                     /db_xref="CDD:467980"
ORIGIN      
        1 dtvisagggq slqgqavntt lnggeqwvhe dgiatgtvin ekgwqaiksg avatdtvvnt
       61 gaeggpdaen gdtgqtvygd avrttinkng rqivaaegta nttvvyagg
//
LOCUS       WP_235175433             475 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Xanthomonas arboricola].
ACCESSION   WP_235175433
VERSION     WP_235175433.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 475)
  AUTHORS   Dutta,R. and Inouye,M.
  TITLE     GHKL, an emergent ATPase/kinase superfamily
  JOURNAL   Trends Biochem Sci 25 (1), 24-28 (2000)
   PUBMED   10637609
REFERENCE   2  (residues 1 to 475)
  AUTHORS   Stock,J.
  TITLE     Signal transduction: Gyrating protein kinases
  JOURNAL   Curr Biol 9 (10), R364-R367 (1999)
   PUBMED   10339418
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10612637
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..475
                     /product="ATP-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=53531
     Region          8..142
                     /region_name="HATPase_c_3"
                     /note="Histidine kinase-, DNA gyrase B-, and HSP90-like
                     ATPase; pfam13589"
                     /db_xref="CDD:433332"
     Site            order(14,18,21,42,44,46,48,78..81,94,96)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340408"
     Site            order(55,81)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340408"
ORIGIN      
        1 mrdlgyslet aiadlidnsi sagadridii cdvsgehplv vildngkgmt egellaamrh
       61 gtdnpkrhrs pkdlgrfglg lktasfsqcr sltvvstnda sisgtewnld riaatddwil
      121 slldevdiqa lpyvdrlgkq gtaviwreld rlledesgdr rqeivnekle avgrhlslvf
      181 hrflsgevkg hsriglting hpiaafdpfc rknpatqvlp eeivrigdae vrlqpyvlph
      241 hsrlsaseyd yyqdrsdfis nqggyvyrng rlmawgdwfr lvpkgeatkl arvqidfpns
      301 ldeawtidik ksrarpphav rerlrqiiar itsrsvtvhr grgqklfqet qapfweryad
      361 hdgirfaind qhpiivslae rlspedvdll rtlldsvaas lpvemiysdy sthpreinqr
      421 svdesqtmer lrslrqvlyg egpgdakafl qivrsthlfd gqmelaekfi seafa
//
LOCUS       WP_235175451             217 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6393 family protein [Xanthomonas arboricola].
ACCESSION   WP_235175451
VERSION     WP_235175451.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 217)
  AUTHORS   Hou,J., Robbel,L. and Marahiel,M.A.
  TITLE     Identification and characterization of the lysobactin biosynthetic
            gene cluster reveals mechanistic insights into an unusual
            termination module architecture
  JOURNAL   Chem Biol 18 (5), 655-664 (2011)
   PUBMED   21609846
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039755.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19930.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..217
                     /product="DUF6393 family protein"
                     /calculated_mol_wt=23905
ORIGIN      
        1 mqeylnayiw mwqkmdrlgs pddptqlfin hgklvvrwyr lhggsvdvpa clgrlrtart
       61 fyssdwlyqe iamprivlng waatlaltgl avlplsscan adtartastq edtmksgasp
      121 mleeiyaskk pvrfeqvdvs sivakyvplg ttklvvletf sksptskive dtpgkvvvrd
      181 nkgqamldpd arsvvmtfsl dadgkvthvd avhiknq
//
LOCUS       WP_235175336              67 aa            linear   BCT 02-MAR-2025
DEFINITION  T3SS effector NleG family protein, partial [Escherichia coli].
ACCESSION   WP_235175336
VERSION     WP_235175336.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 67)
  AUTHORS   Tobe,T., Beatson,S.A., Taniguchi,H., Abe,H., Bailey,C.M.,
            Fivian,A., Younis,R., Matthews,S., Marches,O., Frankel,G.,
            Hayashi,T. and Pallen,M.J.
  TITLE     An extensive repertoire of type III secretion effectors in
            Escherichia coli O157 and the role of lambdoid phages in their
            dissemination
  JOURNAL   Proc Natl Acad Sci U S A 103 (40), 14941-14946 (2006)
   PUBMED   16990433
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018156.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06416.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..67
                     /product="T3SS effector NleG family protein"
                     /GO_function="GO:0004842 - ubiquitin-protein transferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0044403 - biological process involved in
                     symbiotic interaction [Evidence IEA]"
     Region          <14..56
                     /region_name="T3SS_NleG"
                     /note="Effector protein NleG; pfam06416"
                     /db_xref="CDD:368893"
ORIGIN      
        1 fnsakvrfiq qsplydkesl khlvntssph plsrekites mivkenscyf dftsgsiknv
       61 rgeitrl
//
LOCUS       WP_235175591            5403 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Enterobacter hormaechei].
ACCESSION   WP_235175591
VERSION     WP_235175591.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..5403
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..5403
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=557019
     Region          <170..613
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          <398..911
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          <938..1437
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          <1259..1759
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          <1778..1856
                     /region_name="Big_13"
                     /note="Bacterial Ig-like domain; pfam19077"
                     /db_xref="CDD:465968"
     Region          <1884..1959
                     /region_name="Big_13"
                     /note="Bacterial Ig-like domain; pfam19077"
                     /db_xref="CDD:465968"
     Region          <1986..2468
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          <2479..3035
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          <2819..3306
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          3323..3422
                     /region_name="Big_13"
                     /note="Bacterial Ig-like domain; pfam19077"
                     /db_xref="CDD:465968"
     Region          3428..3525
                     /region_name="Big_13"
                     /note="Bacterial Ig-like domain; pfam19077"
                     /db_xref="CDD:465968"
     Region          <3551..4075
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          3829..5300
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
ORIGIN      
        1 mtenkvilav nngdgktrll tadagrtvkv klipgnkyll knvnddfape nitlqrvgka
       61 lhiiqegdtq psiiienyfd gdsknptlmg maedgllyay iplsgesydn gylmaeggla
      121 pvalggeplg aggpllsapd dendmlfgml gwfalaaagv gaafalseld kdesdsqpap
      181 ekpsigkavd degsikgplk sgdvtddstp sligkgkpgd tihiidndke igsvivddeg
      241 ewsytpdkpl gdgehdlsvv vedpdgnmsp psdpitivvd tvapdaptie himdkvgkvt
      301 geiledaytd dpkpemsgtg eagatitiyd ngkkigetsv nddgrwyfkp senltdgnhs
      361 itvsqtdkag nvsepsderd fivlteppgk aetpsviddn gpvtgplkpg dvtddtkpsf
      421 sgegtpgnti vikdndkeig svivddegkw tytpekdlse gehnveviee dplgnvgqps
      481 dpiqiivdtt pparpdrvda edntgpitgq lkggdvtdet rpvfsgkgep gdtvtiydgd
      541 evlgstvidd egnwslkpek plgegdhsit vtqtdkagnt sdpsealefe vdttapdasa
      601 dvlkitavad dvgdrqgnva sgeitddskp lisgigeagn tvyvyttdas gkhligsavv
      661 gsdgtwsltp etplteglnq ltletqdpag nrvagdapsy dinllipist qpsinsvvdn
      721 sephvgplqk gdatndttpt lsgsaapgdi vsildngkvi gsvtadsngk wtftpdaala
      781 dgkhtftvta tdaagnsrts gsfpividta apspaenivi ndnvgdkqgp vgsgdttddq
      841 sptlsgeaep gsvvdiydnd ekigsvivdd egkwsytpdk pldkgdheit ttvtdpsgnt
      901 sepspgisft vdpdpnqvtv gevvddqgti vgnlkpgtvt ddvrpelsgk gkpgstvtik
      961 dgddvlgstv vdpdgnwtft peqdladgnh sltvvskdpa gnevtspsfd itvdatapek
     1021 pvlgsatddv gtirgdlsng sttddanptf ngsaepgsrv diydngehig stiaddkgaw
     1081 qftpttplpe gehhitttat deagntgpes ddfvlvtdyt ppvatgdvln itsvmddvgg
     1141 rqgnvasgei tddskpving igeagstvfv ystdangkhl lgsavvnseg twtlaldtpl
     1201 veglnqltle tqdavgnrva geapsyditv lipvstepsi nsvvdnaeph vgpmqkgett
     1261 ndttptlsgs aapgdvvsil dngkvigtak adssgkwsft pdtaladgqh tftvtatdaa
     1321 gnartsgtfp ividtaapsp aenivindnv gdkqgpvgdg dttddqsptl sgeaepgsvv
     1381 diydndekig svivddegkw sytpdkplak gdheitttvt dpsgntseps pgisftvdpd
     1441 pnqvtvgevv ddqgpivgnl rpgnvtddar pelggkgkpg stvtimdgdd vlgstvvdpd
     1501 gnwtftpeqd ladgdhsltv iskdpagndv tspsfdisvd tvapekpvvg latddvgssr
     1561 gdlssgsttd danptfkgsa epgsrvdiyd ngeligstvv denggwqftp ttalpegehh
     1621 itttatdkag ntgpesddfv litdytapda skvaitevyd dvntagvias geetddnrpl
     1681 ikgtgaepgn titvyngdkv igtakvqadg twslepttpl pdgrytltak etdgvgnvsg
     1741 psgeyiinva tvppqaptld tvyddvapha dylqkgdvtn dttptlsgss gvaggtisiy
     1801 dngrligttt vgsngswsft pdtaladgsh sftatvtdgv grtseptggf gividtkapd
     1861 aasdllvtdn vgayqgpvvs gdttddntpt lsgraepgst vniidngqvi gstkvnpdgt
     1921 wsftpdqals ngehdltttv tdpsgntgpe gshvvitvdv vpgkveitav tddagsvtgs
     1981 lsqnavtddt rpqisgtaka gstvtimdgs nvlgtttaga dgtwsftpsv dlgrgdhtft
     2041 atakdpmgne sassswtvti dtdapvkpti daalddvgsv qgnlanggtt ddptptlsgk
     2101 aeagstvkiy dqngllgevt akadgtwsfs pvaklpegeh rfhvtatdra gntsadsddf
     2161 vltldytapd asklaitevy ddvktagvva sggetddnrp likgtgaepg ntitvyngdk
     2221 vigtatvqad gtwslepttp lpdgrytlta ketdgvgnvs gpsgeyiinv atvppqaptl
     2281 dtvyddvaph adylqkgdvt ndttptlsgs sgvaggtisi ydngrligta tvgsngswsf
     2341 tpdtaladgs hsftatvtdg vgrtseptgg fgividtkap daasdllvtd nvgayqgpvv
     2401 sgdttddntp tlsgraepgs tvniidngqv igstkvnpdg twsytpdqpl angahdlttt
     2461 vtdpsgntgp egshvvitvd vvpgkveitg vtddagsvtg slsrnavtdd trpqisgtak
     2521 agstvtimdg snvlgtttag adgtwsftps vdlgrgehtf tatakdpmgn esassswtvt
     2581 idtdapvkpt idaalddvgt vqgalsngss tddptptlsg kaeagstvki ydqngllgev
     2641 takadgtwsf spvaklpege hrfhvtatdk agntssasdd fvltldytap dasklaitev
     2701 yddvntagvi asgeetddnr plikgtgaea gntitvysgd kvigtatvqa dgtwsleptt
     2761 plpdgrytlt aketdgvgnv sgpsgeyiin vatvppqapt ldtvyddvap hadylqkgdv
     2821 tndttptlsg ssgvaggtis iydngrligt ttvgsngsws ftpdtaladg shsftatvtd
     2881 gvgrtseptg gfgividtka pdaasdllvt dnvgayqgpv vsgdttddnt ptlsgraepg
     2941 stvniidngq vigstkvnpd gtwsytpdqp langahdltt tvtdpsgntg pegshvvitv
     3001 dvvpgkveit avtddagsvt gslsqnavtd dtrpqisgta kagstvtimd gsnvlgttta
     3061 gadgtwsftp svdlgrgdht ftatakdpmg nessssswtv tidtdapvkp tidaalddvg
     3121 svqgnlangg stddptptls gkaeagstvk iydqngllge vtakadgtws fsptaklpeg
     3181 ehrfhvtatd ragntsaasd dfvlnldyta pdaskvsitd vvddfgsvtg svtsggktdd
     3241 ntplikgtga eagntitvyn gdkvigtakv qadgtwelqv tkalpdgtyn ltvketdsvg
     3301 nttaaspeyi iqidaggqpl pptlssvedd vaphtgplqk dattndntll ltgtaeanvt
     3361 vriyggpngt tllgetkada qgkwsfntpk ladgvhtfva eaindigqvs pqtggfpitv
     3421 dtsapgevtg fivsdnegpk tgvlangdtt ddatptisgk aepgsvvhvy vngqengtav
     3481 adangnwtyt tgsladgeyt ftaraedsag nlgaenagvt vtldtssvpv tivrvmddkg
     3541 svtgemkand vtddarpeii gkakagstvt imdgnvvlgs vkadasgnwv ftptsdlgdg
     3601 vhnitatakd ltgkedtsst fsfeidskap nrpsidyaed qvgtvkddln sndvtddpqp
     3661 ilhgtaeags tvniytvdgt llgsvtansn gawnfkpgsk lpegkntfyv tatdeagnvs
     3721 dksadfiltt dytapdaskv tidsvtdnvg nvqgivadgg vlddtrpvir gsgaevgnvi
     3781 tvyttdkdgn tkvlgtttvd qngkweltps eslygdsinq ltvtetdrvg nvakpadsyd
     3841 vimsdtpdap ailnvlddtg ttvinlanna ltkddtptlk gtadgaagdt itiyngsqvv
     3901 gkttlnsdgt wsftpspala dgsytftvtn tnsagqesdr sgsftvtids tapnpvsglq
     3961 vsddqgawkg qltdgmttdd nkptftgkae qgstvtiydn gqamgtvtvt npdgswqftp
     4021 stplvdgehq fatqvtdpag nasaivddit vnvstgasyl qllqvvddvq eaggsrvlrd
     4081 gevtndsqvq lvgkatagst iiitdvggvq lgtvkadang nweftptssl sdgahtlrit
     4141 gtdpsnnplt pidfdlvvdt vapvapaitd vlddvnpvqg svahgkptnd ttpeitgtae
     4201 kgstvnvyhq vdattrillg tavadsttgq wtlqitdank laegtwnlva tstdaagnvs
     4261 tpsntwtivv dttvsdavin issvsedrga sdtdfitsdn tllingelnk alqadewvei
     4321 sldngvtwtr astvtgtswt vdmqstplnd gaytiqarvv dnagnvgstd sqalqvasgg
     4381 sdmnglsttt kvttdtshgl ttgdhfshaa tatngdmvtr drtvtisgnl saalqagehl
     4441 qisldngktw ktlalngqsw syelpeatas tthsfklqvi dvagnpgtnt nfadsynvvi
     4501 dldspngitg apdvpqhttt gdsftfssgq ygrveagaii slvsdvnnng tyqegldqvi
     4561 gfvkanadgs wslntslpsg ahnlafvvwd eagnrssmsa ststgvtegg gstlieqtwg
     4621 gttdadsrgl naaavtisqd glwsffqsar gtsgtatana grvydsvtre dydstylaqp
     4681 stengagydv dstsysryvn saafadinrd gyadvmsqis sysnagrtay wlqnadgsys
     4741 akaldqgtln hlggvisydr egdgyldfvl gdseadsisf ikntqgtlsy ednsgfsdgh
     4801 pggalptsls vlhevgavdi dnngtvdita hidyngagnl vgnnsrglgi lynqttgtsk
     4861 tnfgevgyya nvfrddghed ygnlsismty adynndgwld lflsrgskgg snsdesriyl
     4921 ndgtgklnat dsqaqwfgdn vdggtslavd wnhdgkmdii evprsgvtgs pmlytntgsn
     4981 nwgankvslt gsttfnnmtg avaldydwdg smdlvlyrsg adadvvardd agrtmlvknt
     5041 niaadgtslq irivdgngin tfysntvkly nsagelvatq linpqssgss nsmglvsffg
     5101 ldpnevysvq mlritdgead hvgatssigg ytngtvnesw gglttgkahd syvltaesgn
     5161 aanntsgnsg ivgtgyndtf fgsagndtyn ggggwnqivs gkpvwsetag mdvvdysrst
     5221 tainanlwtg tatgngtdkl lniegllgss qqdtftdnsa nnlfdgrggn dafylvnggn
     5281 dtlmynvleg mtndstggng hdtihgfkvg nlvkdsdadl ldmselldyk gsisffeddg
     5341 kleldyssrg vldyvkvevv gsdtvisidr dgqggqhgft qvvtladvqt dlvtllqnnq
     5401 imm
//
LOCUS       WP_235175656             121 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: M20/M25/M40 family metallo-hydrolase
            [Viridibacillus].
ACCESSION   WP_235175656
VERSION     WP_235175656.1
KEYWORDS    RefSeq.
SOURCE      Viridibacillus
  ORGANISM  Viridibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae.
REFERENCE   1  (residues 1 to 121)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Viridibacillus"
                     /db_xref="taxon:496496"
     Protein         1..121
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=13158
     Region          2..>100
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 misllkklii yksdtptgan ealqfcanwl ekqgidvnlh qnngfdilta eigqgadcli
       61 wnghvdvvpa aieqytpfvd gdllygrgaa emkagvaamm fsfvelsnql tscldafnfi
      121 w
//
LOCUS       WP_235175636             148 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family protein [Enterobacter hormaechei].
ACCESSION   WP_235175636
VERSION     WP_235175636.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 148)
  AUTHORS   Heinz,D.W. and Matthews,B.W.
  TITLE     Rapid crystallization of T4 lysozyme by intermolecular disulfide
            cross-linking
  JOURNAL   Protein Eng 7 (3), 301-307 (1994)
   PUBMED   8177878
REFERENCE   2  (residues 1 to 148)
  AUTHORS   Blaber,M., Lindstrom,J.D., Gassner,N., Xu,J., Heinz,D.W. and
            Matthews,B.W.
  TITLE     Energetic cost and structural consequences of burying a hydroxyl
            group within the core of a protein determined from Ala-->Ser and
            Val-->Thr substitutions in T4 lysozyme
  JOURNAL   Biochemistry 32 (42), 11363-11373 (1993)
   PUBMED   8218201
REFERENCE   3  (residues 1 to 148)
  AUTHORS   Weaver,L.H. and Matthews,B.W.
  TITLE     Structure of bacteriophage T4 lysozyme refined at 1.7 A resolution
  JOURNAL   J Mol Biol 193 (1), 189-199 (1987)
   PUBMED   3586019
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013152.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00959.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..148
                     /product="glycoside hydrolase family protein"
                     /GO_function="GO:0003796 - lysozyme activity [Evidence
                     IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /GO_process="GO:0016998 - cell wall macromolecule
                     catabolic process [Evidence IEA]"
                     /calculated_mol_wt=17092
     Region          27..145
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
ORIGIN      
        1 mdiktrlidy egsrayqtrm gyfrnnkyyp ykdsegfltv gfghkvlqgd nfnngitevd
       61 airllekdia iaesqltkln ltipkdwhdf miimifqlgl sgtmkfkkmi qalrdanype
      121 aikqakdslw yrqtpnrvna miaqltnk
//
LOCUS       WP_235175879             154 aa            linear   BCT 02-MAR-2025
DEFINITION  three component ABC system middle component [Pseudomonas
            aeruginosa].
ACCESSION   WP_235175879
VERSION     WP_235175879.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 154)
  AUTHORS   Krishnan,A., Burroughs,A.M., Iyer,L.M. and Aravind,L.
  TITLE     Comprehensive classification of ABC ATPases and their functional
            radiation in nucleoprotein dynamics and biological conflict systems
  JOURNAL   Nucleic Acids Res 48 (18), 10045-10075 (2020)
   PUBMED   32894288
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039805.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20131.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..154
                     /product="three component ABC system middle component"
                     /calculated_mol_wt=17348
     Region          2..153
                     /region_name="MC3"
                     /note="ABC-three component (ABC-3C) system Middle
                     Component 3; pfam20131"
                     /db_xref="CDD:466298"
ORIGIN      
        1 mssvidalyq lkynpfkyge hiasfystiq nveknlllap liiplcthpt fgtsvssavf
       61 gekkkssiwt ifndraklyd lqerisefqs ltekciqfcl tndwlaiddk nlsleyitts
      121 dqkltlqkna anfgklvsgh svielyaflg vkpr
//
LOCUS       WP_235176047             207 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein [Escherichia coli].
ACCESSION   WP_235176047
VERSION     WP_235176047.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06763.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..207
                     /product="phage tail protein"
                     /calculated_mol_wt=23031
     Region          3..206
                     /region_name="Minor_tail_Z"
                     /note="Prophage minor tail protein Z (GPZ); pfam06763"
                     /db_xref="CDD:284235"
ORIGIN      
        1 maikglaqam knldaidrra vprasattln rvagaiiakt assvaralav prrlirarir
       61 lsparpdkvy akvyintgnl paiklgearv rlsrrkrrkk gqraalkggg svlivgkrri
      121 pdafitrlan grwhvmqrmp wassstgads kgrpkrhrlp ievvkiptag plaetferer
      181 drmyreklpa qmmkamthql rlvlkrk
//
LOCUS       WP_235176054             535 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4049 domain-containing protein [Escherichia coli].
ACCESSION   WP_235176054
VERSION     WP_235176054.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024655.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13258.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..535
                     /product="DUF4049 domain-containing protein"
                     /calculated_mol_wt=61302
     Region          209..532
                     /region_name="DUF4049"
                     /note="Domain of unknown function (DUF4049); pfam13258"
                     /db_xref="CDD:289998"
ORIGIN      
        1 mkaidnifky vpsnhkdkhs dkvnnhqhhs kvdkthrski veidkldnds qidndfgmhi
       61 iyflqhghwr vndrshqmek vwfynsepsi diqeynrfad nttdtfifti ipdnnhvlkl
      121 sspitvtvec kggyyfinss gdksditykv nglsiipenf ftllsgnfka dwrwdvsket
      181 fpkdkfagyv ksvfskidfy kqcgvinpqn antayfgdtd grvgavlyal lvsghigire
      241 kgwsllcell nhenmassay khknnkvlye llntrdmiln elhkhvflkd daitpciflg
      301 dhtgdrfsti fgdkyiltll nsmrnmesnk dsrinknvvv lagnheinfn gnytarlanh
      361 klsagdtynl ikaldvchyd serkvltshh giirdeenac yclgalqvpf kqmknptdpe
      421 elanifnkkh kehmndpllh lirsnimkpt avyadyinnt tdfrpkperi ficgetlkce
      481 dpsiyirqky ghhgvgvdqn qqfdngvmgl nstkkvldkn nkiiyssgls cfqsh
//
LOCUS       WP_235176107            1122 aa            linear   BCT 02-MAR-2025
DEFINITION  S6 family peptidase, partial [Escherichia coli].
ACCESSION   WP_235176107
VERSION     WP_235176107.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 1122)
  AUTHORS   Maldonado-Contreras,A., Birtley,J.R., Boll,E., Zhao,Y., Mumy,K.L.,
            Toscano,J., Ayehunie,S., Reinecker,H.C., Stern,L.J. and
            McCormick,B.A.
  TITLE     Shigella depends on SepA to destabilize the intestinal epithelial
            integrity via cofilin activation
  JOURNAL   Gut Microbes 8 (6), 544-560 (2017)
   PUBMED   28598765
REFERENCE   2  (residues 1 to 1122)
  AUTHORS   Johnson,T.A., Qiu,J., Plaut,A.G. and Holyoak,T.
  TITLE     Active-site gating regulates substrate selectivity in a
            chymotrypsin-like serine protease the structure of haemophilus
            influenzae immunoglobulin A1 protease
  JOURNAL   J Mol Biol 389 (3), 559-574 (2009)
   PUBMED   19393662
REFERENCE   3  (residues 1 to 1122)
  AUTHORS   Henderson,I.R., Czeczulin,J., Eslava,C., Noriega,F. and Nataro,J.P.
  TITLE     Characterization of pic, a secreted protease of Shigella flexneri
            and enteroaggregative Escherichia coli
  JOURNAL   Infect Immun 67 (11), 5587-5596 (1999)
   PUBMED   10531204
REFERENCE   4  (residues 1 to 1122)
  AUTHORS   Benjelloun-Touimi,Z., Si Tahar,M., Montecucco,C., Sansonetti,P.J.
            and Parsot,C.
  TITLE     SepA, the 110 kDa protein secreted by Shigella flexneri: two-domain
            structure and proteolytic activity
  JOURNAL   Microbiology (Reading) 144 (Pt 7), 1815-1822 (1998)
   PUBMED   9695914
REFERENCE   5  (residues 1 to 1122)
  AUTHORS   Stein,M., Kenny,B., Stein,M.A. and Finlay,B.B.
  TITLE     Characterization of EspC, a 110-kilodalton protein secreted by
            enteropathogenic Escherichia coli which is homologous to members of
            the immunoglobulin A protease-like family of secreted proteins
  JOURNAL   J Bacteriol 178 (22), 6546-6554 (1996)
   PUBMED   8932311
REFERENCE   6  (residues 1 to 1122)
  AUTHORS   Bachovchin,W.W., Plaut,A.G., Flentke,G.R., Lynch,M. and
            Kettner,C.A.
  TITLE     Inhibition of IgA1 proteinases from Neisseria gonorrhoeae and
            Hemophilus influenzae by peptide prolyl boronic acids
  JOURNAL   J Biol Chem 265 (7), 3738-3743 (1990)
   PUBMED   2105953
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014452.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02395.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>1122
                     /product="S6 family peptidase"
                     /GO_function="GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          1..48
                     /region_name="ESPR"
                     /note="Extended Signal Peptide of Type V secretion system;
                     pfam13018"
                     /db_xref="CDD:463773"
     Region          58..763
                     /region_name="Peptidase_S6"
                     /note="Immunoglobulin A1 protease; pfam02395"
                     /db_xref="CDD:396804"
     Region          809..1058
                     /region_name="PL1_Passenger_AT"
                     /note="Pertactin-like passenger domains (virulence
                     factors), C-terminal, subgroup 1, of autotransporter
                     proteins of the type V secretion system of Gram-negative
                     bacteria. This subgroup includes the passenger domains of
                     Neisseria and Haemophilus IgA1 proteases; cd01343"
                     /db_xref="CDD:238653"
ORIGIN      
        1 mnkiyslkys sltggliavs elskkvkgkt grklmtasva lsvslsalpv eastvsaeip
       61 yqtfrdfaen kgvftpgatg ieikdkngnl tgvlntpmld fsslsrdght tlihpgygvs
      121 akhgrlqslk tatfgynaey kivnnnhasy dftapryskl vtevipvntg dgkyndskky
      181 tafyragvgd qyikdkkgnh tllnryapqn ayltggtvgt pyygrvsnqt vlisssgntf
      241 nqthgplasy gqsgdsgspl yawdniqnkw vlagvtlyne gvngsrnwwl elpnsfinet
      301 iksdskeivv knkkeditws fdktqgtgvi nlerkdhiin ghknnnpdyg dnivfsgeeg
      361 vinikndiaq gagfiqfnnn yivstqnnst wtgsgiivnd gsevywging vkddnlhklg
      421 sgkliingng intgglkvgd gtvllsqhkd aegrvqafss vnissgrpvv vlsddkqinp
      481 dniswgyrgg tldlngnnit ftriqasdyg aiitnnndkk sitnlnistl kdtdinvsvs
      541 dvhvlggkgk pgdlfydrgt grylilkkek yspffqdvnn tsvwqyvgkn rneaiavvks
      601 ekiknsskpy lfhgqlngnm diniqsgmgv ntfaidgsvn ipngtlsnkl gslifqghpv
      661 ihagvgvsae qndwetryft lntlnldgsd fhlsrnavmt gnihatnssk vtlgsssvyv
      721 drndgtgesv nstsatasdi nekdlskftg ditadnsnii innkfeggvs avnksaidih
      781 sqhavinrws disdnskltl kknatltvnt glvnkgtiei genaelnlqg ypiadkfips
      841 lhdlgnvkmt asnatltagn yamfsgeita ddatavrvnl gsetstlsef npnpeltdlm
      901 fdkyntswtg kisalkgdas mvntvwrmtg dsglntlkts ksltvfssdn kfstltvndl
      961 ttsdstfvlr sdstgsdkvv vknklegknn nllvdyvand gkhnslnlel vsapkgtaad
     1021 vfnsqtqnvg fsdvtpvieq kdsgekttwt lkgfnavanq qsaekaenfm sagyknflae
     1081 vnnlnkrmgd lrdingeaga warimsgtgs asggfsdnyt hv
//
LOCUS       WP_235176108            1063 aa            linear   BCT 02-MAR-2025
DEFINITION  S6 family peptidase, partial [Escherichia coli].
ACCESSION   WP_235176108
VERSION     WP_235176108.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 1063)
  AUTHORS   Maldonado-Contreras,A., Birtley,J.R., Boll,E., Zhao,Y., Mumy,K.L.,
            Toscano,J., Ayehunie,S., Reinecker,H.C., Stern,L.J. and
            McCormick,B.A.
  TITLE     Shigella depends on SepA to destabilize the intestinal epithelial
            integrity via cofilin activation
  JOURNAL   Gut Microbes 8 (6), 544-560 (2017)
   PUBMED   28598765
REFERENCE   2  (residues 1 to 1063)
  AUTHORS   Johnson,T.A., Qiu,J., Plaut,A.G. and Holyoak,T.
  TITLE     Active-site gating regulates substrate selectivity in a
            chymotrypsin-like serine protease the structure of haemophilus
            influenzae immunoglobulin A1 protease
  JOURNAL   J Mol Biol 389 (3), 559-574 (2009)
   PUBMED   19393662
REFERENCE   3  (residues 1 to 1063)
  AUTHORS   Henderson,I.R., Czeczulin,J., Eslava,C., Noriega,F. and Nataro,J.P.
  TITLE     Characterization of pic, a secreted protease of Shigella flexneri
            and enteroaggregative Escherichia coli
  JOURNAL   Infect Immun 67 (11), 5587-5596 (1999)
   PUBMED   10531204
REFERENCE   4  (residues 1 to 1063)
  AUTHORS   Benjelloun-Touimi,Z., Si Tahar,M., Montecucco,C., Sansonetti,P.J.
            and Parsot,C.
  TITLE     SepA, the 110 kDa protein secreted by Shigella flexneri: two-domain
            structure and proteolytic activity
  JOURNAL   Microbiology (Reading) 144 (Pt 7), 1815-1822 (1998)
   PUBMED   9695914
REFERENCE   5  (residues 1 to 1063)
  AUTHORS   Stein,M., Kenny,B., Stein,M.A. and Finlay,B.B.
  TITLE     Characterization of EspC, a 110-kilodalton protein secreted by
            enteropathogenic Escherichia coli which is homologous to members of
            the immunoglobulin A protease-like family of secreted proteins
  JOURNAL   J Bacteriol 178 (22), 6546-6554 (1996)
   PUBMED   8932311
REFERENCE   6  (residues 1 to 1063)
  AUTHORS   Bachovchin,W.W., Plaut,A.G., Flentke,G.R., Lynch,M. and
            Kettner,C.A.
  TITLE     Inhibition of IgA1 proteinases from Neisseria gonorrhoeae and
            Hemophilus influenzae by peptide prolyl boronic acids
  JOURNAL   J Biol Chem 265 (7), 3738-3743 (1990)
   PUBMED   2105953
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014452.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02395.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>1063
                     /product="S6 family peptidase"
                     /GO_function="GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          1..48
                     /region_name="ESPR"
                     /note="Extended Signal Peptide of Type V secretion system;
                     pfam13018"
                     /db_xref="CDD:463773"
     Region          68..668
                     /region_name="Peptidase_S6"
                     /note="Immunoglobulin A1 protease; pfam02395"
                     /db_xref="CDD:396804"
     Region          753..999
                     /region_name="PL1_Passenger_AT"
                     /note="Pertactin-like passenger domains (virulence
                     factors), C-terminal, subgroup 1, of autotransporter
                     proteins of the type V secretion system of Gram-negative
                     bacteria. This subgroup includes the passenger domains of
                     Neisseria and Haemophilus IgA1 proteases; cd01343"
                     /db_xref="CDD:238653"
ORIGIN      
        1 mnkiyslkys hitggliavs elsgrvssrt tgkkkhkril alcflgllps sysfasqmdi
       61 snfyirdymd faqnkgifqa gatnieivkk dgstlklpev pfpdfspvan kgsttsigga
      121 ysitathntk nhhsvatqnw gnstykqtdw ntshpdfavs rldkfvvetr gategadisl
      181 skqqaleryg vnykgekkli afragsgvvs vkkngritpf nevsykpeml ngsfvhiddw
      241 sgwliltnnq fdefnniasq gdsgsalfvy dnqkkkwvva gtvwgiynya ngknhaaysk
      301 wnqttidnlk nkfsykvdms gaqvatieng kltgtgsdtt diknkdlift gggdillkss
      361 fdngagglvf ndkktyrvng ddftfkgagv dtrngstvew nirydnkdnl hkigdgtldv
      421 rktqntnlkt geglvilgae ktfnniyits gdgtvrlnae nalsggeyng iffaknggtl
      481 dlngynqsfn kiaatdsgav itntstkksi lslnntadyi yhgningnld vlqhhetkke
      541 nhrlildggv dttndislrn tqlsmqghat ehaiyrdgaf scslpapmrf lcgsdyvagm
      601 qnteadavkq ngnayktnna vsdlsqpdwe tgtfrfgtlh lensdfsigr nanvigdiqa
      661 sksnitigdt tayidlhagk nitgdgfgfr qnivrgnsqg etlftggita edstivikdk
      721 akalfsnyvy llntkatiek gadvttqsgm fstsdisvsg nlsmtgnpdk dnkfepsiyl
      781 ndasylltdd sarlvaknka svvgdihstk sasimfghde sdlsqlsdrt skglalgflg
      841 gfdvsyrgsv napsasatmn ntwwqltgds alktlkstns mvyftdsann kkfhtltvde
      901 latsnsayam rtnlsesdkl evkkhlsgen nillvdflqk ptpekqlnie lvsapkdtnk
      961 nvfkaskqti gfsnvtpvit tqetddkitw sltgyntvan keatrnaaal fsvdykafln
     1021 evnnlnkrmg dlrdingeag awarimsgtg sasggfsdny thv
//
LOCUS       WP_235176129             183 aa            linear   BCT 02-MAR-2025
DEFINITION  pyridoxal-dependent decarboxylase, partial [Escherichia coli].
ACCESSION   WP_235176129
VERSION     WP_235176129.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 183)
  AUTHORS   Viguera,E., Trelles,O., Urdiales,J.L., Mates,J.M. and
            Sanchez-Jimenez,F.
  TITLE     Mammalian L-amino acid decarboxylases producing 1,4-diamines:
            analogies among differences
  JOURNAL   Trends Biochem Sci 19 (8), 318-319 (1994)
   PUBMED   7940675
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012503.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00282.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>183
                     /product="pyridoxal-dependent decarboxylase"
                     /GO_function="GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA]"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0019752 - carboxylic acid metabolic
                     process [Evidence IEA]"
     Region          <1..>183
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            104
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99743"
ORIGIN      
        1 wdvelreipm rpgqlfmdpk rmieacdent igvvptfgvt ytgnyefpqp lhdaldkfqa
       61 dtgididmhi daasggflap fvapdivwdf rlprvksisa sghkfglapl gcgwviwrde
      121 ealpqelvfn vdylggqigt fainfsrpag qviaqyyefl rlgregytkv qnasyqvaay
      181 lad
//
LOCUS       WP_235176161             137 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1627 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235176161
VERSION     WP_235176161.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019406.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07789.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>137
                     /product="DUF1627 domain-containing protein"
     Region          1..137
                     /region_name="DUF1627"
                     /note="Protein of unknown function (DUF1627); pfam07789"
                     /db_xref="CDD:429660"
ORIGIN      
        1 qtadelatlf gttsrkvast lamaiskgrl lrvnqggkfr ycipgdnlpa epkaasvaet
       61 agkafpqpag valpvqeaat qediktetva divqslpsft etraddlvlp slhmanrelr
      121 raknhvqkwe rvcaalr
//
LOCUS       WP_235176148             173 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4329 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235176148
VERSION     WP_235176148.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025581.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14220.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..173
                     /product="DUF4329 domain-containing protein"
     Region          <1..26
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
     Region          41..159
                     /region_name="DUF4329"
                     /note="Domain of unknown function (DUF4329); pfam14220"
                     /db_xref="CDD:433783"
ORIGIN      
        1 piglkggwnl ytyplspvng mdplglyefk skniddigif alamcngesi neikeyggli
       61 ckkqgeyfpm npissndnds vdlrnikcpe gservgdyht hgfysddkgn kvtkendvyd
      121 slnfsskdlt nsymngmgkk eyssylgtpn ntylkynpka kgngvtiirq gsn
//
LOCUS       WP_235176165             230 aa            linear   BCT 02-MAR-2025
DEFINITION  ESPR-type extended signal peptide-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_235176165
VERSION     WP_235176165.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 230)
  AUTHORS   Leyton,D.L., Rossiter,A.E. and Henderson,I.R.
  TITLE     From self sufficiency to dependence: mechanisms and factors
            important for autotransporter biogenesis
  JOURNAL   Nat Rev Microbiol 10 (3), 213-225 (2012)
   PUBMED   22337167
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 230)
  AUTHORS   Desvaux,M., Scott-Tucker,A., Turner,S.M., Cooper,L.M., Huber,D.,
            Nataro,J.P. and Henderson,I.R.
  TITLE     A conserved extended signal peptide region directs
            posttranslational protein translocation via a novel mechanism
  JOURNAL   Microbiology (Reading) 153 (Pt 1), 59-70 (2007)
   PUBMED   17185535
REFERENCE   3  (residues 1 to 230)
  AUTHORS   Desvaux,M., Cooper,L.M., Filenko,N.A., Scott-Tucker,A.,
            Turner,S.M., Cole,J.A. and Henderson,I.R.
  TITLE     The unusual extended signal peptide region of the type V secretion
            system is phylogenetically restricted
  JOURNAL   FEMS Microbiol Lett 264 (1), 22-30 (2006)
   PUBMED   17020545
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024418.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13018.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>230
                     /product="ESPR-type extended signal peptide-containing
                     protein"
     Region          1..>230
                     /region_name="auto_Ag43"
                     /note="Ag43/Cah family autotransporter adhesin; NF033177"
                     /db_xref="CDD:467980"
ORIGIN      
        1 rlvwnhitgt lvvaselvrs rgkrtgvala lslatatsvp alaadsvvqa geivnggtlv
       61 nhdnqivfgt tngitistgl eygpdneant ggqwvqdggt asnttissgg lqfvgaggka
      121 tdtiineggg qslkglalnt tlnggeqwmh egaiatgtvi ndkgwqvvkp gavatdtvvn
      181 tgaeggpdae nadtgqfvrg navrttinkn grqivavegt anttvvyagg
//
LOCUS       WP_235176247             436 aa            linear   BCT 02-MAR-2025
DEFINITION  SMODS domain-containing nucleotidyltransferase [Pseudomonas
            aeruginosa].
ACCESSION   WP_235176247
VERSION     WP_235176247.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 436)
  AUTHORS   Burroughs,A.M., Zhang,D., Schaffer,D.E., Iyer,L.M. and Aravind,L.
  TITLE     Comparative genomic analyses reveal a vast, novel network of
            nucleotide-centric systems in biological conflicts, immunity and
            signaling
  JOURNAL   Nucleic Acids Res 43 (22), 10633-10654 (2015)
   PUBMED   26590262
REFERENCE   2  (residues 1 to 436)
  AUTHORS   Davies,B.W., Bogard,R.W., Young,T.S. and Mekalanos,J.J.
  TITLE     Coordinated regulation of accessory genetic elements produces
            cyclic di-nucleotides for V. cholerae virulence
  JOURNAL   Cell 149 (2), 358-370 (2012)
   PUBMED   22500802
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037736.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18144.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..436
                     /product="SMODS domain-containing nucleotidyltransferase"
                     /calculated_mol_wt=50158
     Region          1..158
                     /region_name="SMODS"
                     /note="Second Messenger Oligonucleotide or Dinucleotide
                     Synthetase domain; pfam18144"
                     /db_xref="CDD:436305"
     Region          300..428
                     /region_name="AGS_C"
                     /note="Adenylyl/Guanylyl and SMODS C-terminal sensor
                     domain; pfam18134"
                     /db_xref="CDD:436297"
ORIGIN      
        1 msvaemfsef ignlaisnae tismrygelt aalnkqfrdt esktantlqv gsfgrrtgin
       61 gisdldmlyi mpqtkwddyd kiggqlkllq dtkdailkry pstkvrvdrl vvtvtytnfh
      121 vevqpvfeqd dksykypdtk nggswkvtkp reemdavanl davknsnlrr lckmvcawkn
      181 khgigiggll idtlaynfln stsdydeksy lyydwlsrdf fkyiselpdq seyaapgsrq
      241 rvkvkkkfqr rakkayelcl kaieaegkes anekwkavyg rpfpaaqkks aeasaaqtwk
      301 dteefiedkf qvdiryqlki dcevmqrgfr kfllrnmlgl kiplrsdkkl kfwvselpqi
      361 ngpfliywkv lnrgdearrr dcvrgqitld ggwrtkeess nfrgdhivec ylvenetvva
      421 kdrihvpiva dgsdyd
//
LOCUS       WP_235176255             906 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein [Pseudomonas aeruginosa].
ACCESSION   WP_235176255
VERSION     WP_235176255.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024554.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13155.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..906
                     /product="toprim domain-containing protein"
                     /calculated_mol_wt=103176
     Region          178..260
                     /region_name="TOPRIM_primases"
                     /note="The topoisomerase-primase (TOPRIM) nucleotidyl
                     transferase/hydrolase domain found in the active site
                     regions of bacterial DnaG-type primases and their
                     homologs. Primases synthesize RNA primers for the
                     initiation of DNA replication. DnaG type primases are...;
                     cd01029"
                     /db_xref="CDD:173779"
     Site            order(184..185,188,232,234,236)
                     /site_type="active"
                     /db_xref="CDD:173779"
     Site            order(184,232)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:173779"
     Site            order(186..187,193..194,204)
                     /site_type="other"
                     /note="interdomain interaction site"
                     /db_xref="CDD:173779"
     Region          498..>717
                     /region_name="primase_Cterm"
                     /note="phage/plasmid primase, P4 family, C-terminal
                     domain; TIGR01613"
                     /db_xref="CDD:273716"
ORIGIN      
        1 mkemdrelka dvlrrlqdqy gltpikgtky mrkgecptcg kkelytlvds pwfircgrgk
       61 cgdtwhikei ypelfddwsk rspatdkepa asaraylaha rgfdltlidg wysqenywdr
      121 dleigsatvr fplkkggywe rlidrpsrfg kkkarfkpgd sprgvwwcpp svdlqevkel
      181 wivegifdai allhhgidav samssnafpe qslrelatac ggklpkliwa ldnepgahry
      241 trrwvteara lgyvceaaql pqrnnrkfdw ndlhqrwmfi ddaaervaqi ekdlktarhe
      301 galliaesaa ekallmydwg krgefhfrfa nrlywfkldi ekfnkamqsl edsdnhddql
      361 lnqkqmrdka lqqaggvvei ancfpqalyf qrnevtdesw yyfridrpdd envkntftsa
      421 qvaaasefkk rllgvaagai ftgsgaqldq imklqltglk tvatidylgy srehacyvlg
      481 dvavrggvie kanaedffef qklrlktlqr siklqiatda kdyrpewldw lwtcfgakgl
      541 valafwfgsl faeqiraefq sfpfleatge agagkstlit flwkllgrad eegqdpskmt
      601 kaglrrwltq lsnmpmvmle adrsdnsrag gaaksfdwde fkplfngral gvtgqktagn
      661 etyeppfrgt lvmsqnatvq aseaimtriv klhfirpeit resqaaadnl nhldvlevsh
      721 fllmairaea rvlecfrerl kvhsatlrgl kqirierlil nhaqmmalvd alrlvvplse
      781 hqlacaqqtl mtmalerqda vnadapevae fwevydylen lseepvlnhs knpgtiainl
      841 nefvklaadh rqkvadaatl rdllkesrrh kfieykavds avraaharqn pftnrpstvk
      901 cwifqa
//
LOCUS       WP_235176260             184 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6160 family protein [Pseudomonas aeruginosa].
ACCESSION   WP_235176260
VERSION     WP_235176260.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039674.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19657.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..184
                     /product="DUF6160 family protein"
                     /calculated_mol_wt=18976
     Region          26..>99
                     /region_name="DUF6160"
                     /note="Family of unknown function (DUF6160); pfam19657"
                     /db_xref="CDD:437489"
ORIGIN      
        1 mlptrsllpf flapallasa asqaameald ndslsqvtgq agislrldlr agaarvawvd
       61 dggslslrnl vidngcvkag dcpdgrggni plgatqlgls lpifgveqpt laldvttgsg
      121 ggqqlaislp dlatindqli asglpaqrir lrvasdlyig dnsigrielr ditdlrgtir
      181 vwgh
//
LOCUS       WP_235176266             129 aa            linear   BCT 02-MAR-2025
DEFINITION  Mu-like prophage major head subunit gpT family protein [Pseudomonas
            aeruginosa].
ACCESSION   WP_235176266
VERSION     WP_235176266.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021628.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10124.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..129
                     /product="Mu-like prophage major head subunit gpT family
                     protein"
                     /calculated_mol_wt=14032
     Region          <1..54
                     /region_name="Mu-like_gpT"
                     /note="Mu-like prophage major head subunit gpT; cl01826"
                     /db_xref="CDD:470363"
     Region          <60..>127
                     /region_name="Mu-like_gpT"
                     /note="Mu-like prophage major head subunit gpT; cl01826"
                     /db_xref="CDD:470363"
ORIGIN      
        1 mkkfkdeegr slnvspnvll vgpaledvak mlltnpklad ntpnpyvgta elvvdgries
       61 dtawflldtt kpvkpfifqp rkqpefvsqv nldsddvfnl rklkfgaear aaagygfwql
      121 aygstgtga
//
LOCUS       WP_235176271             273 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: phage BR0599 family protein [Bacteria].
ACCESSION   WP_235176271
VERSION     WP_235176271.1
KEYWORDS    RefSeq.
SOURCE      Bacteria (bacteria)
  ORGANISM  Bacteria
            Unclassified.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020913.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09356.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Bacteria"
                     /db_xref="taxon:2"
     Protein         1..273
                     /product="phage BR0599 family protein"
                     /calculated_mol_wt=30127
     Region          18..272
                     /region_name="phg_TIGR02218"
                     /note="phage conserved hypothetical protein BR0599;
                     TIGR02218"
                     /db_xref="CDD:274038"
     Region          188..257
                     /region_name="Phage_BR0599"
                     /note="Phage conserved hypothetical protein BR0599;
                     pfam09356"
                     /db_xref="CDD:430554"
ORIGIN      
        1 msfnsrersl adgqpvrlyq fsrgairwsy nssdrdityq nqifrtvqgg itdngiicsg
       61 dpqsdqfvit aptdldvall yktrspsgai dlvvydmhyg daeaavswvg qigdvdwptv
      121 dscritcvse delmdqpgli dtycrtctav lgdhrckvnl vphrvtltpq svsdwmissg
      181 vvagyadgwf tagyvewqvd gdnydrrhie rhagadlyil ggtqgipaga qlrvypgcdf
      241 laetcdakfd nllnfrgink lqgkspfdgd qvw
//
LOCUS       WP_235176321             129 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding enzyme [Pseudomonas aeruginosa].
ACCESSION   WP_235176321
VERSION     WP_235176321.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024591.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13193.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..129
                     /product="AMP-binding enzyme"
                     /calculated_mol_wt=14332
     Region          <1..119
                     /region_name="AFD_class_I"
                     /note="Adenylate forming domain, Class I superfamily;
                     cl17068"
                     /db_xref="CDD:473059"
ORIGIN      
        1 mgfieirdri kdviktggew lssleledli srhpavreva vvgvpdpqwg erpfallvvr
       61 egqqldargl kehlkpfveq gninkwaips qiavvtdipk tsvgkldkkr irieiaqwqe
      121 agsaflstv
//
LOCUS       WP_235176355              97 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Dyadobacter chenhuakuii].
ACCESSION   WP_235176355
VERSION     WP_235176355.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 97)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..97
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=11122
     Region          17..>86
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
ORIGIN      
        1 mnkdgdiiii eddqgdqlli eqafqelgyt nkriyfpdgl ealtyldgqt plpfiilsdi
       61 nlpkldglel rrrlkenasl nlkcipylyl rlhstrm
//
LOCUS       WP_235176360             358 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235176360
VERSION     WP_235176360.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 358)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 358)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 358)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 358)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..358
                     /product="ATP-binding protein"
                     /calculated_mol_wt=39470
     Region          <4..109
                     /region_name="GAF_2"
                     /note="GAF domain; cl21515"
                     /db_xref="CDD:473894"
     Region          <86..349
                     /region_name="COG4251"
                     /note="Bacteriophytochrome (light-regulated signal
                     transduction histidine kinase) [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443393"
ORIGIN      
        1 mlsetlyhts qlsavypdaa afkdvacgil isvlsrddas ylmwfkpevi qtvnwagdpn
       61 kpvvtgdnml siisprnsfe vwsqsvagas alwnseelrs vtrlreeilf finqkaaeli
      121 alndklkvay eeldifshti ahdlknplss vlgyahllkm edndpdtshs idriiaagkr
      181 msrmiteilq hskagqteln fcsvnvrpmi edfivdlaia yepgrvvfti gelpliqgdp
      241 vmlcqvfenl lgnavkysqg adiirisvta tvqgpeiifr isdngqgidh gqehkifdlf
      301 qrasnvgtie gtgvglaivr kimdrhggki qvkstfgigt tfflhfkqni igqhqaat
//
LOCUS       WP_235176363             295 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235176363
VERSION     WP_235176363.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 295)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 295)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..295
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=31574
     Region          1..218
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(7,9..10,12,31,78..80,131,137..138,161,165,192..195)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(101,138,161,165)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 miivmtgata gigaealkyf tklsdtiiyv gargsgralp egsealaldl sslksvrsfa
       61 dtikqrlgnt kidvlvlnag iqaannhvrs eegfeltfat nhlshyllvr llepnladgg
      121 riiittsdah dpavipfgpk tlnidklrns tehspkgmal yaatklcnml tarslekefg
      181 ahknidviaf npgltgdtsl mgkqpailkl lipairplfy lismfkpaff igtakrsgea
      241 laqlamgkvv mpagkiyasl vrgkltfpep sklaqsdlnm dllwkesakm vglpa
//
LOCUS       WP_235176371             646 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma 54-interacting transcriptional regulator [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235176371
VERSION     WP_235176371.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 646)
  AUTHORS   Studholme,D.J. and Dixon,R.
  TITLE     Domain architectures of sigma54-dependent transcriptional
            activators
  JOURNAL   J Bacteriol 185 (6), 1757-1767 (2003)
   PUBMED   12618438
REFERENCE   2  (residues 1 to 646)
  AUTHORS   Chaney,M., Grande,R., Wigneshweraraj,S.R., Cannon,W., Casaz,P.,
            Gallegos,M.T., Schumacher,J., Jones,S., Elderkin,S., Dago,A.E.,
            Morett,E. and Buck,M.
  TITLE     Binding of transcriptional activators to sigma 54 in the presence
            of the transition state analog ADP-aluminum fluoride: insights into
            activator mechanochemical action
  JOURNAL   Genes Dev 15 (17), 2282-2294 (2001)
   PUBMED   11544185
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00158.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..646
                     /product="sigma 54-interacting transcriptional regulator"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008134 - transcription factor binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=71788
     Region          2..114
                     /region_name="REC_DC-like"
                     /note="phosphoacceptor receiver (REC) domain of modulated
                     diguanylate cyclase and similar domains; cd17534"
                     /db_xref="CDD:381089"
     Site            order(6..8,30..31,52,54..55,78..79,99)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381089"
     Region          <323..638
                     /region_name="RocR"
                     /note="RocR-type transcriptional regulator, contains PAS,
                     AAA-type ATPase, and DNA-binding Fis domains
                     [Transcription, Signal transduction mechanisms]; COG3829"
                     /db_xref="CDD:443041"
ORIGIN      
        1 mlivedefiv andlgiilqq agyevcgvaa saeeadellq kvnpdlvlld irlggkrsgi
       61 diarklktkn vpfvfisans dqetleeakr tdpygfivkp frkkdllvai dialyrhkhv
      121 iesrskqegl lesqlaelhk snlesvekll kiaklvqphi pfdliafatw sadleseayl
      181 rvgfdeyqfi gkqqlitvsg lkdatvtsvl htskpllnav iydessstsv esastlqnly
      241 lksfklnscl vypialqeas lanylflnrr egvynqqhia llerigayma dsptsakgnk
      301 sisahnfqen plnstakvfs pgfkgiignh pllltaldqt tqvapyntav lilgesgtgk
      361 enialaihsl sprkdkpfvk vncaaipaql ieselfghek gaftgasekr kgkfeqadgg
      421 tifldeigel plemqvkllr iiqekefeyv gssatkkvni rivaatnrnl ekevangsfr
      481 ldlyyrlnaf pislpalrer rsdieeltly fagkfcmefg ktfhgiqesm feemkaydwp
      541 gnirelinvi eqavilnngn sklelrrrll dvstqaagef tiktlsdlkh vqietereyi
      601 tsiliktngv vrgalgaael mnikpttles rmaklgikke dfgkkf
//
LOCUS       WP_235176375             283 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase fold domain-containing protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235176375
VERSION     WP_235176375.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 283)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019474.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07859.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..283
                     /product="alpha/beta hydrolase fold domain-containing
                     protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=31753
     Region          <112..252
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 mdkeiiykqr qllneahadt ealsqmgtts itkvttfdgy sfsltiirpf sivreirvlp
       61 vflfvphkpy dttcirfqeq iaselvknsg haaaildykg ensvgfqlfe mfaamkwlac
      121 hgsdeginas kmaivglqlg anitsvltqm amsnncpevs lqilidpqfy ispkntyqrp
      181 gtckiqpnfv dpewlnieri ydlpldskva eligipptli qlsgdtglhc eleyyctkll
      241 hagtnvtyin yearneksqe gsilhlnrtl iadtatelrr lhy
//
LOCUS       WP_235176404             431 aa            linear   BCT 02-MAR-2025
DEFINITION  relaxase/mobilization nuclease domain-containing protein
            [Dyadobacter chenhuakuii].
ACCESSION   WP_235176404
VERSION     WP_235176404.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 431)
  AUTHORS   Meyer,R.
  TITLE     Identification of the mob genes of plasmid pSC101 and
            characterization of a hybrid pSC101-R1162 system for conjugal
            mobilization
  JOURNAL   J Bacteriol 182 (17), 4875-4881 (2000)
   PUBMED   10940031
REFERENCE   2  (residues 1 to 431)
  AUTHORS   Bravo-Angel,A.M., Gloeckler,V., Hohn,B. and Tinland,B.
  TITLE     Bacterial conjugation protein MobA mediates integration of complex
            DNA structures into plant cells
  JOURNAL   J Bacteriol 181 (18), 5758-5765 (1999)
   PUBMED   10482518
REFERENCE   3  (residues 1 to 431)
  AUTHORS   Byrd,D.R. and Matson,S.W.
  TITLE     Nicking by transesterification: the reaction catalysed by a
            relaxase
  JOURNAL   Mol Microbiol 25 (6), 1011-1022 (1997)
   PUBMED   9350859
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015397.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03432.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..431
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /calculated_mol_wt=48283
     Region          <67..229
                     /region_name="Relaxase"
                     /note="Relaxase/mobilization nuclease domain; cl21589"
                     /db_xref="CDD:451322"
ORIGIN      
        1 mvavihtsss lravltyner kveegqavcl aaekymkeas dltfdqklyt lqrqaslnlr
       61 akvnsvhvsl nfdpserhdv dtlrsiaasy iekigfkeqp clvyqhmdag hphihlvttn
      121 iradgsripl hnlgknqsek arkeieiefn lvkadgrkqq npelkpamvs anygkvetkr
      181 aianvlsgvi gqykftsipe lnavlkqynv madrgseqsr tyqkgglhyh llnpkgepvg
      241 vpikasdfhq kptlkslqsr feineqlrqp dktrvknaid falygdanvs larlsktler
      301 dgidtvlrkn esgliygity vdhrtksvfn gsslgknysa kaiqercspa dnprqdpiin
      361 eqkigrnkid lddrsssrsn dftisdgrsf neniitdsad alfdpvkqdg ympsqlrstr
      421 rkkkkglsqs l
//
LOCUS       WP_235176415             260 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA-formamidopyrimidine glycosylase family protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235176415
VERSION     WP_235176415.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 260)
  AUTHORS   Gilboa,R., Zharkov,D.O., Golan,G., Fernandes,A.S., Gerchman,S.E.,
            Matz,E., Kycia,J.H., Grollman,A.P. and Shoham,G.
  TITLE     Structure of formamidopyrimidine-DNA glycosylase covalently
            complexed to DNA
  JOURNAL   J Biol Chem 277 (22), 19811-19816 (2002)
   PUBMED   11912217
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013328.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01149.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..260
                     /product="DNA-formamidopyrimidine glycosylase family
                     protein"
                     /GO_function="GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /calculated_mol_wt=29035
     Region          2..>205
                     /region_name="Nei"
                     /note="Formamidopyrimidine-DNA glycosylase [Replication,
                     recombination and repair]; COG0266"
                     /db_xref="CDD:440036"
ORIGIN      
        1 mpevpelniv gitlekhfkg qkfkslevlw kkwvkaseee fnealkggkl qsvgrngkel
       61 hlkfdngtvl gihmmltgkm illptdhnlk npifeltfen gagiivldgm gqakpilnpe
      121 ipsipdimgd dfteeylrki laktggkikq viqkqewirg igsayadeil waakispysv
      181 aknipsakvk dlyeairnvt veataelekl ktssdvfeme nkdhryvhnp kkthspdgee
      241 iivgklgsgk tyytesqtly
//
LOCUS       WP_235176441             791 aa            linear   BCT 02-MAR-2025
DEFINITION  prolyl oligopeptidase family serine peptidase [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235176441
VERSION     WP_235176441.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012546.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00326.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..791
                     /product="prolyl oligopeptidase family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=89354
     Region          110..>168
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
     Region          <236..505
                     /region_name="DPPIV_N"
                     /note="Dipeptidyl peptidase IV (DPP IV) N-terminal region;
                     pfam00930"
                     /db_xref="CDD:395744"
     Region          545..791
                     /region_name="DAP2"
                     /note="Dipeptidyl aminopeptidase/acylaminoacyl peptidase
                     [Amino acid transport and metabolism]; COG1506"
                     /db_xref="CDD:441115"
ORIGIN      
        1 mlpffrftll avclftglsk aqtlgpltve kimrdpktwi gtspsdihws edsktiyfnw
       61 npdkhaadsl ygydltskki skiapairkt lpgksdvfnk qktqrlyekn gdiylisttd
      121 ykirqltntv eresnpafsg ddqrvvftrg mnlfsiapdn gllsqltdfk sgtkkadskp
      181 egqekflkdd qlamfevlke rkekkdagkk itdaekaayp keiylgeknv ssqqispdgq
      241 fityrltqpn ksakstivpn yvtesgfted idartkvgap asqsefwvyn ikkdttlkva
      301 vknipgigdk pdylkdypkl dsawkkdker dviingpfws dnsknavvvv rsldgkdrwi
      361 maldpetatl klldrqrdea wiggpgiggy pmssgeigfi ddnsiyfqse etgyshlysl
      421 dvvsgkktal tsgkfevqnv vfsknkksfy litnevhpge qhfykmsvtg gprtritqqt
      481 gahevtlspd etklavrssq snipwelfvm dnpdantksi nseqvtrsts peflsypwrk
      541 akvvtikatd gqdiyarvye pkrsngkavi fvhgagylqn ahkwwsqyfr eymfnnmlvd
      601 kgytvldldy rassgygrdw rtgiyrfmgg kdltdntdga kwlvknygin pkkigiyggs
      661 yggfitlmgl fttpdifvag aalrpvtdwa aynhpytani lnepqsdsla yrksspiyha
      721 aglknhllmc hgmvdvnvhy qdvvrlsqrl ielgknnwel asypmedhaf veasswtdey
      781 krilklfeek l
//
LOCUS       WP_235176447             199 aa            linear   BCT 02-MAR-2025
DEFINITION  class I SAM-dependent methyltransferase [Dyadobacter chenhuakuii].
ACCESSION   WP_235176447
VERSION     WP_235176447.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024967.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13578.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..199
                     /product="class I SAM-dependent methyltransferase"
                     /EC_number="2.1.1.-"
                     /calculated_mol_wt=23096
     Region          58..161
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
ORIGIN      
        1 mglrtyiren fiadikpykp knfrkpekml eivsawkgle mivediidqf dlkrdrcief
       61 gvefgystvv fsnyfksvtg vdtfegdvht vnknehfeet skrlagyani qlvksdykdw
      121 iatdnqhynl ahvdivhnya etfecglwaa qhsdctifhd tesfpevrra vkdlakktgq
      181 klynypqhyg lgilvarkr
//
LOCUS       WP_235176210             371 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA-binding protein [Salmonella enterica].
ACCESSION   WP_235176210
VERSION     WP_235176210.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 371)
  AUTHORS   Macartney,D.P., Williams,D.R., Stafford,T. and Thomas,C.M.
  TITLE     Divergence and conservation of the partitioning and global
            regulation functions in the central control region of the IncP
            plasmids RK2 and R751
  JOURNAL   Microbiology (Reading) 143 (Pt 7), 2167-2177 (1997)
   PUBMED   9245806
REFERENCE   2  (residues 1 to 371)
  AUTHORS   Jagura-Burdzy,G. and Thomas,C.M.
  TITLE     kfrA gene of broad host range plasmid RK2 encodes a novel
            DNA-binding protein
  JOURNAL   J Mol Biol 225 (3), 651-660 (1992)
   PUBMED   1602476
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023168.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11740.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         1..371
                     /product="DNA-binding protein"
                     /calculated_mol_wt=41333
     Region          <67..>360
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
ORIGIN      
        1 mrpatyepeq iieaglalqa egrnitgfal rnqvgggnpt rlrqiwdeyq asqstvvtep
       61 vaelpvevae evkavsaals eritqlatel ndkavraaer rvaevtraag eqtaqaerel
      121 adaaqtvddp eekldelqdr ydsltlales erslrqqhdv emaqlkerla aaeentrqre
      181 eryqeqktvl qdalnaeqaq hkntredlqk rleqisaean arteelkser dkvntlltrl
      241 esqenalase rqqhlatret lqqrleqaia dtqarageia lerdrvsslt arlesqekas
      301 seqlvrmgse iaslterctq lenqrddarl etmgeketva alrgeaealk rqnqslmaal
      361 sgnkqtggqn a
//
LOCUS       WP_235176473             138 aa            linear   BCT 02-MAR-2025
DEFINITION  DKNYY domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235176473
VERSION     WP_235176473.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025028.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13644.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..138
                     /product="DKNYY domain-containing protein"
                     /calculated_mol_wt=15442
     Region          <49..124
                     /region_name="DKNYY"
                     /note="DKNYY family; pfam13644"
                     /db_xref="CDD:404523"
ORIGIN      
        1 mryllgilvv iclvwicskc igcsykkgvf kpgaltpagy hvrdhrvyyy gglmndsike
       61 lvdvdaatfe ivrldtdipg yvsssyyahd hkqvyyrgyt vpgadpgsfk atgqysgqdk
      121 nhvydqtrvl pndpynkn
//
LOCUS       WP_235176481             652 aa            linear   BCT 02-MAR-2025
DEFINITION  UbiA family prenyltransferase [Dyadobacter chenhuakuii].
ACCESSION   WP_235176481
VERSION     WP_235176481.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013226.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01040.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..652
                     /product="UbiA family prenyltransferase"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /calculated_mol_wt=73342
     Region          18..270
                     /region_name="UbiA"
                     /note="UbiA prenyltransferase family; pfam01040"
                     /db_xref="CDD:460038"
     Region          293..652
                     /region_name="BH0617"
                     /note="Predicted naringenin-chalcone synthase [Secondary
                     metabolites biosynthesis, transport and catabolism];
                     COG3424"
                     /db_xref="CDD:442650"
ORIGIN      
        1 mgidgntikl lripfsfflm plflfaysqa dtvvhhhalf afliihlliy pasngynsyv
       61 drdeesvggl ekppmptaal fyltmfldft aivlaflfvn tlfafclvly iaasrayssr
      121 qirlkrypvi gfltvvifqg aftyymsiag vsesalmlsr ehiyvllacs fqiagayplt
      181 qvyqhqqdlk dgvvtlsykl gyrgtflfta amfllcnvfy ylyftskglg mvfyiiqvff
      241 lpivlyfgyw fylvlkdrse anfrntmrmn wtaaicmnsc fiilivinri plsylsaiet
      301 avpehcysqe tltsfymnst editnkrkik ivagktgian rysviadfdk apedyqffnk
      361 tatllpeptl tqrmqlyqqh atelsisair kingfaeiks rlthlitvtc tglfapgldv
      421 elmreldlnp aiqrssvnfm gcnaaiialk nadaicrsqp rakvlivcte lctihfqkry
      481 nddyllsnli fgdgaaavlv taeagsdyah hveidafnsl ilhngyadma wqlsetgfim
      541 nltsyvpdli rknikpmlek iglapdafkh wavhpggkri vddfvaalel dkgclaatyd
      601 vlrnfgnmss ptvlfvlkqv letakpenig nrifaaafgp glsietmqlr yv
//
LOCUS       WP_235176486             289 aa            linear   BCT 02-MAR-2025
DEFINITION  ThuA domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235176486
VERSION     WP_235176486.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 289)
  AUTHORS   Ampomah,O.Y., Avetisyan,A., Hansen,E., Svenson,J., Huser,T.,
            Jensen,J.B. and Bhuvaneswari,T.V.
  TITLE     The thuEFGKAB operon of rhizobia and agrobacterium tumefaciens
            codes for transport of trehalose, maltitol, and isomers of sucrose
            and their assimilation through the formation of their 3-keto
            derivatives
  JOURNAL   J Bacteriol 195 (17), 3797-3807 (2013)
   PUBMED   23772075
REFERENCE   2  (residues 1 to 289)
  AUTHORS   Ampomah,O.Y., Jensen,J.B. and Bhuvaneswari,T.V.
  TITLE     Lack of trehalose catabolism in Sinorhizobium species increases
            their nodulation competitiveness on certain host genotypes
  JOURNAL   New Phytol 179 (2), 495-504 (2008)
   PUBMED   19086182
REFERENCE   3  (residues 1 to 289)
  AUTHORS   Jensen,J.B., Peters,N.K. and Bhuvaneswari,T.V.
  TITLE     Redundancy in periplasmic binding protein-dependent transport
            systems for trehalose, sucrose, and maltose in Sinorhizobium
            meliloti
  JOURNAL   J Bacteriol 184 (11), 2978-2986 (2002)
   PUBMED   12003938
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018038.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06283.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..289
                     /product="ThuA domain-containing protein"
                     /calculated_mol_wt=31324
     Region          <71..265
                     /region_name="COG3828"
                     /note="Type 1 glutamine amidotransferase (GATase1)-like
                     domain [General function prediction only]"
                     /db_xref="CDD:443040"
ORIGIN      
        1 mkrilkitll lalvsghifa qkivfiagpd shgkgehehq ggstllvksi qeglpgvnav
       61 llqsgwpkds avlndadaiv iyadgggdhl liphlaemdr ltkkgiglvm lhfslevpag
      121 evgnhfkdwi ggyfeinwsv npvweaafst fpdhpiangv kpfsitdewy yhmrfadgmk
      181 nitpilqalp pestlkgkdg thsnnpavre avltkkelqp vawalerpdg grgfgfsggh
      241 mhknwgndnf rkivlnaiaw takakipeeg ipsatpteag lnaltkkld
//
LOCUS       WP_235176537             167 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235176537
VERSION     WP_235176537.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..167
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=18671
     Region          17..136
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mqtlndevkn lyggnvrvrv sgiyivrdri llvnhslygk eqsfwsppgg gilfgetaea
       61 alkreikeet gldaeigdll fvnehvrppl haielffeik aaqgkmdkga dpeisaanqi
      121 ieevkflrld eiksfpsdas hsifsrvrsl eellrldkfl pqpetli
//
LOCUS       WP_235176573             391 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Dyadobacter chenhuakuii].
ACCESSION   WP_235176573
VERSION     WP_235176573.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..391
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=44490
     Region          18..389
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mdivitgqqa wdveigsnck nialefsksh rvlyvnapld ritamrhsad pkivrrlrvl
       61 hkqedgleev eknlwvlypd rmiesinwis fddifkmfna rnnrifvdsi aralkrlgfe
      121 nvihfndndi frsfyikdyl kprlsvyysr dymigveywa khgaklepel iaksdicvan
      181 stylaayckq ynpntfyvgq gcdlelfnsg igaaepadia sipgprigyv galqnlrldl
      241 ellhyiavsr pawqlvlvgp eddvfkestl hqfdnviftg sknaetlpay insfdvclnp
      301 qllnqltign yprkideyla lgkpvvatrt namdvfsdyv ylaenkeeyi vmiekalaed
      361 sgakaeerqa farshswens vaeiykaina l
//
LOCUS       WP_235176606             484 aa            linear   BCT 02-MAR-2025
DEFINITION  S41 family peptidase [Dyadobacter chenhuakuii].
ACCESSION   WP_235176606
VERSION     WP_235176606.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015531.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03572.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..484
                     /product="S41 family peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=53078
     Region          45..429
                     /region_name="Peptidase_S41_CPP_like"
                     /note="C-terminal processing peptidase-like; serine
                     protease family S41; cd07561"
                     /db_xref="CDD:143477"
     Region          <131..190
                     /region_name="cpPDZ_Deg_HtrA-like"
                     /note="permuted PDZ domain of Deg/high-temperature
                     requirement factor A (HtrA) family of housekeeping serine
                     proteases and related domains; cl49614"
                     /db_xref="CDD:483954"
     Site            order(343,368)
                     /site_type="active"
                     /note="Catalytic dyad [active]"
                     /db_xref="CDD:143477"
ORIGIN      
        1 mldikklnll falalgmlvv gckdkdvepd vlaaadttsv sdrkainawl yevmddayfw
       61 ykelptetsl ddsaspydyf ekliyqrqtv drfsavtddi dalqnefngv skifgisysl
      121 sflddgqsni gaflnyvvkg spaaaaglkr gdiilkvngt qltqgnyasl lsgnetvklt
      181 mgalqdgkii atnttysitk aevtedpvaf stviskptag ktigylvytq fvpgneadkn
      241 kydnelrqvf adfkakgvne lvldlrlnsg gyissantla sligknitas kifykeqwnd
      301 kyiaywqkqn ganalnynfq aepnnigsnl nrvfvltsng tasaselvin glkpymnvvt
      361 igentagknl fgslidddkd rwkwgvyvml gqtanandes dygtvdgitp nyivedskvp
      421 ysafgdenet lfrkalevmg vpavansria aaktvepfrk flrddlqtrk nlmikdgslk
      481 avnq
//
LOCUS       WP_235176684             731 aa            linear   BCT 02-MAR-2025
DEFINITION  PepSY domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235176684
VERSION     WP_235176684.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03929.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..731
                     /product="PepSY domain-containing protein"
                     /calculated_mol_wt=80925
     Region          1..333
                     /region_name="PiuB"
                     /note="PepSY-associated TM region [Function unknown];
                     COG3182"
                     /db_xref="CDD:442415"
     Region          343..>447
                     /region_name="Flavodoxin_1"
                     /note="pfam00258"
                     /db_xref="CDD:425562"
     Region          453..731
                     /region_name="FNR_like"
                     /note="Ferredoxin reductase (FNR), an FAD and NAD(P)
                     binding protein, was intially identified as a chloroplast
                     reductase activity, catalyzing the electron transfer from
                     reduced iron-sulfur protein ferredoxin to NADP+ as the
                     final step in the electron transport...; cl06868"
                     /db_xref="CDD:447143"
     Site            order(532,544..547,558..560,565..568,606)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99798"
     Site            order(544,546..547)
                     /site_type="other"
                     /note="conserved FAD binding motif [chemical binding]"
                     /db_xref="CDD:99798"
     Site            order(565,568,571,577)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99798"
     Site            order(601,605..608,610)
                     /site_type="other"
                     /note="beta-alpha-beta structure motif"
                     /db_xref="CDD:99798"
     Site            order(606..607,629..631,693..694)
                     /site_type="other"
                     /note="NAD binding pocket [chemical binding]"
                     /db_xref="CDD:99798"
ORIGIN      
        1 mtislwrysh lalavssfll ltlaavtgii lafqplsekv lpyrtdhfse ttlagtlpvl
       61 rkqypgisel tvdknqfvqi kgsdaegkkl qayidpqtgt llgypapkse ffewvtalhr
      121 slfihetgrf figltaflll litvsgtmli iqrqrglkrf fsrivrdnfa qyyhvvlgrl
      181 slipifiial sgtylslarf gliespvvsa evdfdaiksg pvrdpadfev fkkinlsevq
      241 tiefpfsedp edyytlkltd reitvnqing dilsevrypt aalltelnld lhtgrthaiw
      301 avilaiascn ilffiysgfa mtwkrranrv knkytadese fiilvgseng stfgfanaih
      361 kqliaggrsa yvtelnnyrv ypkasniivm aatyglgnpp tnaahfaahl ekhkqprpvr
      421 fsvvgfgshg ypdfckfafe vdnllakqdw avpaleihtv ndkspdefgq waaswsqhag
      481 valaissdsl ttrhepvqql tvvdkttvst pgeaflislr annptdftsg dllaiypang
      541 hrerlysigk vgsniqlsvk lhegglgsdy lyrlnagsei garivgnphf hfpenassvi
      601 misngtgiap flgmidqqia svdcrlycgf rddasfllyk tsiqtnlkng klnslhvays
      661 regareyvkd llardeafva etlsnngvim lcgslamqnn vvalldhicq trlgknisyf
      721 qshgqvlmdc y
//
LOCUS       WP_235176714             511 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235176714
VERSION     WP_235176714.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024816.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13424.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..511
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=57966
     Region          <244..>486
                     /region_name="PEP_TPR_lipo"
                     /note="putative PEP-CTERM system TPR-repeat lipoprotein;
                     TIGR02917"
                     /db_xref="CDD:274350"
     Region          420..450
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          455..488
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mnwksirhis vtaflgqaml alllacafsv qaedlqydvi ftpklqkayf diqklrlpsa
       61 ralinaernt ektnafipyl dnyadlhyll isedkkayke lsqlenprlq aignlpdnsp
      121 ykrflqaeir lhwafaklkf gnevsgswei ikayklleen rkrfpdflpt lkslgllhvl
      181 igsipenygw vakilglkgn iqnginelri vekevpffkq eaelidlllh aytlqlspaq
      241 qtrlrqwpkq qpdnllihff attvlmkegk sdeaaqflad apsgdpyisf pfleylkgei
      301 slqkgnykqa gehytlflkq yngfnyikds nlklfmshwl ndedqqanvy ikkvkaagsa
      361 iieadqlaer iaaeflsgki sprqkilyka ryatdggylk tasslmetvt eksfisteek
      421 aeynyrkgri lqksgqaasa isyynralti aqqeaagfga asalqlgyif lerndkpnai
      481 ahfkkamafk kheyknsidn karaalttlg q
//
LOCUS       WP_235176722             192 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: rod shape-determining protein MreD
            [Commensalibacter].
ACCESSION   WP_235176722
VERSION     WP_235176722.1
KEYWORDS    RefSeq.
SOURCE      Commensalibacter
  ORGANISM  Commensalibacter
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016019.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04093.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Commensalibacter"
                     /db_xref="taxon:1079922"
     gene            1..192
                     /gene="mreD"
     Protein         1..192
                     /product="rod shape-determining protein MreD"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /calculated_mol_wt=21748
     Region          40..179
                     /region_name="MreD"
                     /note="Cell shape-determining protein MreD [Cell
                     wall/membrane/envelope biogenesis]; COG2891"
                     /db_xref="CDD:442136"
ORIGIN      
        1 mnkkdntynf ndqkspgirp slskfqcidm airsfvpmgf tifvvlflsi pfdipgknel
       61 lpavvvasvy fwsiyrpksm pavgvfcigf lidllnfspp gvvifillit ygigvtqrfr
      121 lakynflliw lifafiaigm fmlqwvltsl fslklmpyts flfeiifaig cypllsvlft
      181 wahrtianpa kv
//
LOCUS       WP_235176723             212 aa            linear   BCT 02-MAR-2025
DEFINITION  SatD family protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235176723
VERSION     WP_235176723.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 212)
  AUTHORS   Kremer,B.H., van der Kraan,M., Crowley,P.J., Hamilton,I.R.,
            Brady,L.J. and Bleiweis,A.S.
  TITLE     Characterization of the sat operon in Streptococcus mutans:
            evidence for a role of Ffh in acid tolerance
  JOURNAL   J Bacteriol 183 (8), 2543-2552 (2001)
   PUBMED   11274114
REFERENCE   2  (residues 1 to 212)
  AUTHORS   Gutierrez,J.A., Crowley,P.J., Cvitkovitch,D.G., Brady,L.J.,
            Hamilton,I.R., Hillman,J.D. and Bleiweis,A.S.
  TITLE     Streptococcus mutans ffh, a gene encoding a homologue of the 54 kDa
            subunit of the signal recognition particle, is involved in
            resistance to acid stress
  JOURNAL   Microbiology (Reading) 145 (Pt 2), 357-366 (1999)
   PUBMED   10075418
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16264.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..212
                     /product="SatD family protein"
                     /calculated_mol_wt=23583
     Region          5..188
                     /region_name="SatD"
                     /note="SatD family (SatD); pfam16264"
                     /db_xref="CDD:435244"
ORIGIN      
        1 mkkhyavita dmvnstffsr ekttewlsem idllrenpaf dwvlkpeiyr gdsfqgvlkn
       61 pneamyaail aranmrthak ntdlrvaigi gkaeqltdra gtsdgeafrl sghladnirk
      121 qkarigialp tpseplnatl dlletlienw ttaqseviva lllkkninqi seqlgisqpa
      181 asqrvasskw wavenflatf pkhlslytkt ks
//
LOCUS       WP_235176758             576 aa            linear   BCT 02-MAR-2025
DEFINITION  M14 family metallopeptidase [Dyadobacter chenhuakuii].
ACCESSION   WP_235176758
VERSION     WP_235176758.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 576)
  AUTHORS   Makarova,K.S. and Grishin,N.V.
  TITLE     The Zn-peptidase superfamily: functional convergence after
            evolutionary divergence
  JOURNAL   J Mol Biol 292 (1), 11-17 (1999)
   PUBMED   10493853
REFERENCE   2  (residues 1 to 576)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10154684
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..576
                     /product="M14 family metallopeptidase"
                     /EC_number="3.4.17.-"
                     /GO_function="GO:0004181 - metallocarboxypeptidase
                     activity [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=66615
     Region          87..301
                     /region_name="M14-like"
                     /note="Peptidase M14-like domain; uncharacterized
                     subgroup; cd06241"
                     /db_xref="CDD:349460"
     Site            order(97,100,160,169..170,199..200,205,287)
                     /site_type="active"
                     /db_xref="CDD:349460"
ORIGIN      
        1 mrlffysilf sftlsaqaqy ttrfessggk qtptyeegia fykllakdfp qiqitekglt
       61 dsgyplhlvl ysksktfdik klksqqkail linnaihpge sdgvdasmml lrdiavnpgk
      121 fpeldnviia vipfynigga lnrnsttrtn qagpeeygfr gnarnydlnr dfikndtrna
      181 rsfaaifhel dpdlfadthv sngadyqyvm tldyaqkdkl ggklgyfndk vflpymykhl
      241 kesgfeatpy vnswgqtpdk gfvqfpdwpr ystgyaalfh tigvmtethm lkpydkrvaa
      301 tyayllgnik flarnrrell klrkdtkeav ktqekfavsw evnkvkntqi dfkgfepeyi
      361 tskvsgaqrl synrskpftk kipfydtysp ldevtkpvay iipqgwhnii dlmklngvev
      421 kqlendaeme vetyyiqdle tpkqpfeghy whtsvttktv kqqvkfkkgd wyipvnqwtn
      481 ryivetlepk gvdsffkwnf fdtilqskeh ysayvfedla aellakdvsl rikladrrkn
      541 dpefaksaaa qldfiydnsa yrekeymryp vfrlmk
//
LOCUS       WP_235176865             197 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3826 domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235176865
VERSION     WP_235176865.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024281.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12875.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..197
                     /product="DUF3826 domain-containing protein"
                     /calculated_mol_wt=22139
     Region          32..191
                     /region_name="DUF3826"
                     /note="Protein of unknown function (DUF3826); pfam12875"
                     /db_xref="CDD:432846"
ORIGIN      
        1 mnlksfllsi alltpalana qsnpdndkay iktvtkrsde ilaglqiads akykqvkeim
       61 vqqyvnlndl ekdnnseqaa qkrtdlhkqy maklsaqltp aqvekikdgm tygvlpityk
      121 aytdmiptlk daekaqimsw ltearelamd ggsseekhkv fgkykgrinn ylssrgydiq
      181 qerknwearq kasksng
//
LOCUS       WP_235176168             157 aa            linear   BCT 02-MAR-2025
DEFINITION  AIDA repeat-containing protein, partial [Escherichia coli].
ACCESSION   WP_235176168
VERSION     WP_235176168.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Selkrig,J., Mosbahi,K., Webb,C.T., Belousoff,M.J., Perry,A.J.,
            Wells,T.J., Morris,F., Leyton,D.L., Totsika,M., Phan,M.D.,
            Celik,N., Kelly,M., Oates,C., Hartland,E.L., Robins-Browne,R.M.,
            Ramarathinam,S.H., Purcell,A.W., Schembri,M.A., Strugnell,R.A.,
            Henderson,I.R., Walker,D. and Lithgow,T.
  TITLE     Discovery of an archetypal protein transport system in bacterial
            outer membranes
  JOURNAL   Nat Struct Mol Biol 19 (5), 506-510,S1 (2012)
   PUBMED   22466966
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 157)
  AUTHORS   Fang,Y., Ngeleka,M., Middleton,D.M. and Simko,E.
  TITLE     Characterization and immuno-detection of AIDA-I adhesin isolated
            from porcine Escherichia coli
  JOURNAL   Vet Microbiol 109 (1-2), 65-73 (2005)
   PUBMED   15950405
REFERENCE   3  (residues 1 to 157)
  AUTHORS   Sherlock,O., Schembri,M.A., Reisner,A. and Klemm,P.
  TITLE     Novel roles for the AIDA adhesin from diarrheagenic Escherichia
            coli: cell aggregation and biofilm formation
  JOURNAL   J Bacteriol 186 (23), 8058-8065 (2004)
   PUBMED   15547278
REFERENCE   4  (residues 1 to 157)
  AUTHORS   Farthing,M.J.
  TITLE     Bugs and the gut: an unstable marriage
  JOURNAL   Best Pract Res Clin Gastroenterol 18 (2), 233-239 (2004)
   PUBMED   15123066
REFERENCE   5  (residues 1 to 157)
  AUTHORS   Benz,I. and Schmidt,M.A.
  TITLE     AIDA-I, the adhesin involved in diffuse adherence of the
            diarrhoeagenic Escherichia coli strain 2787 (O126:H27), is
            synthesized via a precursor molecule
  JOURNAL   Mol Microbiol 6 (11), 1539-1546 (1992)
   PUBMED   1625582
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027494.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16168.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>157
                     /product="AIDA repeat-containing protein"
     Region          <1..>115
                     /region_name="auto_AIDA-I"
                     /note="autotransporter adhesin AIDA-I; NF033176"
                     /db_xref="CDD:380183"
ORIGIN      
        1 vtmtsggali adsgatvegt nasgkfsidg isgqasglll enggsftvna ggqagnttvg
       61 yrgtltlaag gslsgrtqls kgasmvlngd vvstgdivna geihfdnqtt pdaalsrava
      121 kgdspvtfhk lttsnltgqg gtinmrvrld gsnasdq
//
LOCUS       WP_235176910             192 aa            linear   BCT 02-MAR-2025
DEFINITION  DJ-1/PfpI family protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235176910
VERSION     WP_235176910.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 192)
  AUTHORS   Ohnishi,Y., Yamazaki,H., Kato,J.Y., Tomono,A. and Horinouchi,S.
  TITLE     AdpA, a central transcriptional regulator in the A-factor
            regulatory cascade that leads to morphological development and
            secondary metabolism in Streptomyces griseus
  JOURNAL   Biosci Biotechnol Biochem 69 (3), 431-439 (2005)
   PUBMED   15784968
REFERENCE   2  (residues 1 to 192)
  AUTHORS   Halio,S.B., Blumentals,I.I., Short,S.A., Merrill,B.M. and
            Kelly,R.M.
  TITLE     Sequence, expression in Escherichia coli, and analysis of the gene
            encoding a novel intracellular protease (PfpI) from the
            hyperthermophilic archaeon Pyrococcus furiosus
  JOURNAL   J Bacteriol 178 (9), 2605-2612 (1996)
   PUBMED   8626329
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01965.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..192
                     /product="DJ-1/PfpI family protein"
                     /calculated_mol_wt=21646
     Region          5..187
                     /region_name="YajL"
                     /note="Protein/nucleotide deglycase, PfpI/YajL/DJ-1 family
                     (repair of methylglyoxal-glycated proteins and nucleic
                     acids) [Defense mechanisms]; COG0693"
                     /db_xref="CDD:440457"
ORIGIN      
        1 mklagkkigv lleadyfene ifyykfrfpe egadlhfltr lwgqdkltfl gheyrapmdc
       61 wesfenmsde elrtydamiv psgmvsdrlr ytedvekipp ateflkrvfa epgilkgiic
      121 hglwltapat elvrgrrlvc hnnligdaka ygaiytnedv vvdgdlitgr sgghahlfak
      181 kiietlsaan qn
//
LOCUS       WP_235176913             183 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Dyadobacter chenhuakuii].
ACCESSION   WP_235176913
VERSION     WP_235176913.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 183)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 183)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..183
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=20916
     Region          20..>140
                     /region_name="ElaA"
                     /note="Predicted N-acyltransferase, GNAT family [General
                     function prediction only]; COG2153"
                     /db_xref="CDD:441756"
ORIGIN      
        1 metrfeirns efllikldhp erldemgalr vlawkdeqgi sqdffshkaw lddedllahh
       61 wvilhnktiv aaarmtfhtd yksvphadlf dgsilegfgn gpyaslnrlv vapeyrgngf
      121 stlldeariq yaailgarli laqpvasrik pledlgffyl gkirplyqmp erqiyfmike
      181 lgi
//
LOCUS       WP_235176941            1365 aa            linear   BCT 02-MAR-2025
DEFINITION  FG-GAP-like repeat-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235176941
VERSION     WP_235176941.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13517.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1365
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..1365
                     /product="FG-GAP-like repeat-containing protein"
                     /calculated_mol_wt=143994
     Region          274..>317
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          338..388
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          397..447
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          461..507
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          521..569
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          534..606
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          595..668
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          657..730
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          707..755
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          772..825
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          834..879
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          892..949
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          954..1002
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          1018..1073
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          1293..1364
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mkqhykkgly lilfmlwaaa yilkmselvt gthipdlptq ikaknipdqs nvvhdstvsn
       61 iqqslakrey nisfddekks lqspnrmqgl rayykpgelm vnnrvdsagh nfsfkltneg
      121 iyadgqkilg pqtdaalhha dnklqirhhg fteefinnee gvrqnfivss apkatrelqv
      181 rlsakglkvk dlqnnqlqfy aenkkgevvs sliykdikcw dakgdtlpat lsyknglvml
      241 svavedasyp vtidpivvng npanansvle snqagaqagy avssagdvng dgysdvivga
      301 pffdkgesne gaafiyhgsa sgiaasaait legnqneaqf gisaasagdi nkdgfsdiii
      361 gapfyskgen kegvamvfyg salgiksngt imevnqpdak fgraveglgd vngdgysdvi
      421 vgapmydkgq adegaafiyh gsangispaa atvleadqke sqygyssaga gdvngdgynd
      481 viigayaydn gqtnegaafv yhgsavgvsk iaavvfesnq nfaqfgwsva tagdvngdgy
      541 sdiivgsdyy dfgqnnegaa fiyqgsaqgi kagairlesn qaearmgisv acagdvngdg
      601 ysdvligiwq fdkgennega avihhgsang inikaastle snqadagmgl avksagdvng
      661 dgysdvitga nmydngldne gvafvwlgma sglsntsvle legnqgnalf gwsvaaagdv
      721 ngdgfgdiiv gaslfdngdv degaafiyhg svnglmptft taleinkeqa kfgfsvstag
      781 dvngdgyddv vvgaplfeng qenegavfvy ygsnlgvski gqtkiegnkt gielglsvsn
      841 agdtngdgfg divigvifys nneqeegaaf iyngsaagll insvkvlesn qafawfgyst
      901 sgagdvnsdg fadiivgaqf ydniytdaga atifygslag inansfiqle sdqhnalfgc
      961 svssagdvng dgfsdlviga rgydnisidg gaafiyygsv agilsdkfnk igiaathsnl
     1021 gvtvagagdv nadgyhdviv gadyfskgek eegaafifpg tnagifaepi fevqgqrefy
     1081 flgraldgag dingdgygdi vigtqffdhe sfdegsatiy ygnnfnnnnn lqnnlrlyns
     1141 dlttpinqsq kaknnfgisl yaksflgrsk gklvwetkak gqgfskgann vitnstmssg
     1201 swigyaslgl tgvemksvia kqgtstkvrv rvkydpalal tgqlygpwry lpayllgnst
     1261 apvpenvvdd msetvrrkvg etmaekerel vnvypnpasd rlmlksddfd kvksiqmltv
     1321 tgrsvyrsla pvteidvrnv atgnyillit ladgsvstrk vviek
//
LOCUS       WP_235176944             404 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Dyadobacter chenhuakuii].
ACCESSION   WP_235176944
VERSION     WP_235176944.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..404
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44109
     Region          21..397
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(29..30,33..34,37,70,120..121,123..125,128,148,
                     151..152,155,227,230..231,234..236,239,267,271,323..324,
                     328,332,348,351..352,355..356,359)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340887"
ORIGIN      
        1 mlnkiiesyr vsfsglsret wllslvilvn rcgymavpfm smyitqslhr siadaglvit
       61 lfgagsvlgg maggyltdiw gfrpvqivcl iisgilfilf gmvtdftalc flivllsffv
      121 eafkpansta vaaysspenl trsyalnrla tnigfgfgts vggilaainy sllfwvdgiv
      181 yamagvlilf llpnaklvrs vsredsnaks gqspwkdmlf vrfmvivmly micfvllfrl
      241 vpvywkeqmh iheatigill gmngliialf emvliqnlan rrpdsyymia gtlfsalafs
      301 mlvvpvitpi ilagaavlff tigemlalpy istfvlaras efnrgkysaa ysvsqsvaqi
      361 igpaagayia ahwgynvlwi aliflslvca agfktlfqek mglg
//
LOCUS       WP_235177039             292 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaJ C-terminal domain-containing protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235177039
VERSION     WP_235177039.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 292)
  AUTHORS   Silva,J.C., Borges,J.C., Cyr,D.M., Ramos,C.H. and Torriani,I.L.
  TITLE     Central domain deletions affect the SAXS solution structure and
            function of yeast Hsp40 proteins Sis1 and Ydj1
  JOURNAL   BMC Struct Biol 11, 40 (2011)
   PUBMED   22011374
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 292)
  AUTHORS   Li,J., Qian,X. and Sha,B.
  TITLE     The crystal structure of the yeast Hsp40 Ydj1 complexed with its
            peptide substrate
  JOURNAL   Structure 11 (12), 1475-1483 (2003)
   PUBMED   14656432
REFERENCE   3  (residues 1 to 292)
  AUTHORS   Kelley,W.L.
  TITLE     The J-domain family and the recruitment of chaperone power
  JOURNAL   Trends Biochem Sci 23 (6), 222-227 (1998)
   PUBMED   9644977
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013705.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01556.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..292
                     /product="DnaJ C-terminal domain-containing protein"
                     /calculated_mol_wt=32782
     Region          5..288
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
ORIGIN      
        1 mpfvdyyqil gvdknaqdkd iknayrklar kyhpdvnpdd keaekkfqel neanevlsdp
       61 ekrkkydqyg kdwqhsdefe rarqsrahss rqqgqwqtgg ndfsdffesm fgsssgfggs
      121 rqrtlrgqdy qaelhltlqe ayhtqkktit vngkniritv pagiqngqti kiaghggpga
      181 sggqngdlfi tfniaaddkl rrtgddihqk veldlktall ggeliietls gkvklpvkpe
      241 tqngsvvrlk gkgfpvykka esfgdlyvtf dikipenlne rqkeliaeaf nn
//
LOCUS       WP_235177078             253 aa            linear   BCT 02-MAR-2025
DEFINITION  5'-nucleotidase C-terminal domain-containing protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235177078
VERSION     WP_235177078.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 253)
  AUTHORS   Knofel,T. and Strater,N.
  TITLE     X-ray structure of the Escherichia coli periplasmic 5'-nucleotidase
            containing a dimetal catalytic site
  JOURNAL   Nat Struct Biol 6 (5), 448-453 (1999)
   PUBMED   10331872
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014871.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02872.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..253
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /GO_process="GO:0009166 - nucleotide catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=28365
     Region          <33..228
                     /region_name="UshA"
                     /note="2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or
                     3'-nucleotidase, 5'-nucleotidase family [Nucleotide
                     transport and metabolism, Defense mechanisms]; COG0737"
                     /db_xref="CDD:440500"
ORIGIN      
        1 mtlsprhits lawtiafaff sscqqhlavs kneykqyavd nqtaedssiv kyylpykakm
       61 qaemskvigq taqaltkpsd petlmgnyfa damlteglkk dptiqftlst kgglrttfpe
      121 gditvsnvfe lmpfenemvt lklsgenvqq vidfivkkeg episgmrmki rdgvaydvti
      181 agepfdktkt ynlltydyla dggddleclr hpierkeink kvrealldni ndltrqgkki
      241 taqldgrivi ike
//
LOCUS       WP_235177133             666 aa            linear   BCT 02-MAR-2025
DEFINITION  plastocyanin/azurin family copper-binding protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235177133
VERSION     WP_235177133.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012355.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00127.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..666
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /GO_function="GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /calculated_mol_wt=72620
     Region          47..351
                     /region_name="YliI"
                     /note="Glucose/arabinose dehydrogenase, beta-propeller
                     fold [Carbohydrate transport and metabolism]; COG2133"
                     /db_xref="CDD:441736"
     Region          545..664
                     /region_name="Auracyanin"
                     /note="Auracyanins A and B and similar proteins; cd04233"
                     /db_xref="CDD:259895"
ORIGIN      
        1 mknillttli slgcvsayaq skqnkeddfy riitipipen ikmevggmqv lpdgrlatst
       61 rrgevwmign pylkgdgqps fhrfasglhe plgllyrgkd flisqrgevt rlvdtdndgi
      121 advydsfakw plsgnyhqys ygpvpmpnge llvtlnldwv grgasqskwr gwmlklgedg
      181 kltpyatglr spsgfgsykg difytenqgd wvgsgrmthl ekgdfagnpa glrwskeegs
      241 pvkltpsdvp ntgeplydva kklpglkapa vwfphtlvgi stsdfkedvt ngafgpfagq
      301 mfvgdqghsi itrvdlekvn gvwqgtvfpf regfmsgilr mewgldgsmf vgqtsrgwsa
      361 tgkqefgiqr lvwtgkmpfe mknvrsmpdg feitftspvd kkaaadqday klnsftykyh
      421 qtygspivnt qevplkgivv sedglkvrlv ldpallrkgy iheikaegvk gadgnsllha
      481 tgyytlneia sgnpvnasaf tttvkaaavd hsahtaasas aepansapsa krvvempasw
      541 tngpdqtiti gtvpglkfdi seiqvkagsr vrivfnnndd mlhnlvitkp gtanavgeag
      601 lnlglkgsel nyvprtsdvl fhsnivepek sesiyfvapk qtgtyqyvct fpghytlmqg
      661 rlkvtk
//
LOCUS       WP_235177152             638 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Dyadobacter chenhuakuii].
ACCESSION   WP_235177152
VERSION     WP_235177152.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 638)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..638
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=70843
     Region          2..>142
                     /region_name="RpfG"
                     /note="Response regulator c-di-GMP phosphodiesterase, RpfG
                     family, contains REC and HD-GYP domains [Signal
                     transduction mechanisms]; COG3437"
                     /db_xref="CDD:442663"
     Region          138..256
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cl21578"
                     /db_xref="CDD:473914"
     Site            order(165,169,175,188..191,218,223)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(185,189,197,200..201,230,232)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          <238..636
                     /region_name="TMAO_torS"
                     /note="TMAO reductase sytem sensor TorS; TIGR02956"
                     /db_xref="CDD:274362"
ORIGIN      
        1 mentkillld dreenlislk ailsrddiei ysttsaneal rivweneiav alvdvqmpgm
       61 dgfefaetll snpktkeili vfvtaisket tyavrglktg aidylykpld pyitnakvds
      121 lirlarsqke irdknkllen yatiilnspd iiatvepetg niisinpsve kilgispshl
      181 vgttildllv epgnaslrev lvrksyvgge tivvedrffg rlrqpvwlel rimyknrllf
      241 vnlhdvekrk eheralidaq slaekarkak esflanmshe irtplngiig lgnllsatpl
      301 dasqrdlidm lrqssgslln ilndildisk idegkfsiip tstdlrvlgk giidlmrfka
      361 dekklnlsla idqnlpecvm adgmrlnqil lnlvgnalkf tqeggvvcrv dlisktqfgh
      421 kikfsvddtg igmseehlan ifseygqase ntshqyggtg lgltisqklv rlmgselevn
      481 sksnkgsqff ftlilpdane ksvepkpsva fqdlppftgk tvlvaednpi nalllkkylk
      541 twlldatmvl ngreaidalr ekkydliimd trmpemdgfq aasfarkqlm iqtpilslsa
      601 tvlpeeiqqa lasgmndtls kpfepeklhr kiaallge
//
LOCUS       WP_235177155            1108 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235177155
VERSION     WP_235177155.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 1108)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1108
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..1108
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=128033
     Region          3..1101
                     /region_name="RecB"
                     /note="3#-5# helicase subunit RecB of the DNA repair
                     enzyme RecBCD (exonuclease V) [Replication, recombination
                     and repair]; COG1074"
                     /db_xref="CDD:440692"
     Region          <769..874
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            866
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350194"
ORIGIN      
        1 mfkvysssag sgktytltke ylklalhsns dtyfrhilav tftnaaanem kdrillmlri
       61 fsdffnsnad phpmlrdvvt emypdtlqdq elfqgacqli agraqlvfrq ilhrysdfsv
      121 mtidkftqrl issftdelgi pfifetqlds dllddavdrl larigqdgee vlteiveryy
      181 renaeegksw gtlpmqirgt agtllseqsy mqmkrvedlk mqdwiairnq mrafvrerea
      241 hlaklskhaf eliqstflte kdfhqsgrgi ygyfrdraeg kkiwaepnsy vyktigegvw
      301 ygakapvlik deiekvrtdl enyfhqieni rtsetqkitl ygqldrhiyn lsllgeirke
      361 fdallkqnnq vhisdfnrki veivarepvp fiferlgery nhilvdefqd tsklqfanll
      421 plienalsgg ffnlivgdak qsiyrfrggd mdlilhlats qvmalanvlg nssynaerll
      481 sldnyldvnh lkvnrrsrre itdfnnnffa fvaetvgaen vliqdvydqn fqqeipdnvp
      541 ngghveiefl elheeneete eigatdsivr rslelvnelk nqgydwrdma ilcrkkreat
      601 alastlkeag lplisddals lgysrsvhfi isfmkvllss dhrlaryeaa ylfhhvvrre
      661 npaaseyeqi rilceesgld tfleyfkkwn inlssfrmrq lsvlelseql mqrfglfanh
      721 feneylfrfl dvvmdfgnrk snhlgdflty wesarhklsi tipdetnair ittihkskgl
      781 eypvvivpya hwkvtpnakl drlwldlddv dydelalanq pekklrssmv svvkdlentv
      841 vatqytdert rtlvenlnll yvaftrpvqr lyilakrerk wesgqqvsnw lqsylaqegv
      901 epawnesesk yvianghsep mhahrksdaq pfvlnhilsn drteslrlrr madrifdvet
      961 fepkhdrlqk irylltrlkt isdlplaldr lvgegiftka etaaieaqtr dllsdpelsn
     1021 lyqdtgkvqt nrellipggk llhidrvveq tngefifmsf vggsnadepr rhlrklikty
     1081 dgagkksrgv litlenelve wvttksse
//
LOCUS       WP_235177185             223 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6766 family protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235177185
VERSION     WP_235177185.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042831.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20554.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..223
                     /product="DUF6766 family protein"
                     /calculated_mol_wt=24937
     Region          8..223
                     /region_name="DUF6766"
                     /note="Domain of unknown function (DUF6766); pfam20554"
                     /db_xref="CDD:466703"
ORIGIN      
        1 mgqankqhsf lyrnglgllf valfiitlga qavtgwyehn seleqeqaaa itflsylqsg
       61 hfisatfenf eseflqmaly viltvglrqq gsaeskslde peevdrepkp gpdapwpvrk
      121 ggfvlklyen slslvfgilf iiswglhlyg swvdhneqqv llgkakdsig dyllqanfwf
      181 etfqnwqsef lsiasivilt iflrqkgspe skpvdapnse tgk
//
LOCUS       WP_235177227             407 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Dyadobacter chenhuakuii].
ACCESSION   WP_235177227
VERSION     WP_235177227.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 407)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..407
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=44195
     Region          30..300
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     Region          <339..406
                     /region_name="cpPDZ_Deg_HtrA-like"
                     /note="permuted PDZ domain of Deg/high-temperature
                     requirement factor A (HtrA) family of housekeeping serine
                     proteases and related domains; cl49614"
                     /db_xref="CDD:483954"
ORIGIN      
        1 mkyflllllg casfssyaqk fqapairkhi eflasddmeg rgtgslgeir sanyianifg
       61 elglkpagtd agffqpfpvk yaiegnlhqv tarnvagfld ngarktivig ahydhlgkgf
      121 qgsslttdsr nkihngaddn asgttgllel arhfaknnit ekhnylflaf sgeelgligs
      181 kyytenptip lesvscminm dmigrlsnek giivsgwgts pvwgklipdl vkaqnlkytv
      241 dssgvgasdh tsfylknipv vqfftgvhgd yhkvsddier infegeakil siiaglleni
      301 dkettdpqfi tadnphtgnk tsdfkvtlgv mpdysysgkg lkidgvskar paekagiqag
      361 diitklagke itsiydymdv lsehekgekv eaeflrgaet kkvsitf
//
LOCUS       WP_235177261             519 aa            linear   BCT 02-MAR-2025
DEFINITION  SusD/RagB family nutrient-binding outer membrane lipoprotein
            [Dyadobacter chenhuakuii].
ACCESSION   WP_235177261
VERSION     WP_235177261.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 519)
  AUTHORS   Koropatkin,N., Martens,E.C., Gordon,J.I. and Smith,T.J.
  TITLE     Structure of a SusD homologue, BT1043, involved in mucin O-glycan
            utilization in a prominent human gut symbiont
  JOURNAL   Biochemistry 48 (7), 1532-1542 (2009)
   PUBMED   19191477
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024181.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12771.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..519
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /calculated_mol_wt=56460
     Region          30..487
                     /region_name="SusD-like_2"
                     /note="Starch-binding associating with outer membrane;
                     pfam12771"
                     /db_xref="CDD:463695"
ORIGIN      
        1 mknlikvlyl apalfiascd ngfeemninp nastevvpgf lftraqlvtv snnftgaayl
       61 tiggsmqhfa tykevpgagd kyfnfgysqg swqlyggdpv sqgavidiaq vieavstnpa
      121 dvnklsvsri wkaylfhrlt dlygdipyfd agkalssqnf tpkydtqqai yadmlkelde
      181 sinafdaaqp tfgnadliyg geivkwkkfg yslmlrlgmr ltevdpasae twvkkaiagg
      241 vitsdtdmat iayvdgsita srnfiaaglm atdyvspggd nveggklakt lvdhlkttkd
      301 prlnvisvvw tkasatapyv adtatalqkg mpnaafnslp adfdsysepn pntilkynap
      361 llvftpaevh lllaeaglrg wysattpaae yesavtsgmk qwaafgaggv isdakiaayl
      421 kanpfkatgt laekmeqigt qkwvalfled eyeiwsnwrr tgypkltptn ypgnltggki
      481 ptrfvipdse eqynqanfye artrqggtnt lssmvwwdk
//
LOCUS       WP_235177271             567 aa            linear   BCT 02-MAR-2025
DEFINITION  GH39 family glycosyl hydrolase [Dyadobacter chenhuakuii].
ACCESSION   WP_235177271
VERSION     WP_235177271.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013400.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01229.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..567
                     /product="GH39 family glycosyl hydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=64386
     Region          32..567
                     /region_name="XynB"
                     /note="Beta-xylosidase [Carbohydrate transport and
                     metabolism]; COG3664"
                     /db_xref="CDD:442881"
ORIGIN      
        1 miiknmlrwi lsgfallvfs khcsaqeskq kpvaieinlt vekgpakpiw awfgydepny
       61 tymkdgkkll teisqlskvp vyvrahsmfv tgdgvaalkw gstnvytedk kgnpvydwti
      121 vdkifdtyie rgmkpiaqig fmpealsskp qpyrhhwkpg ddyndiytgw ayppnnyekf
      181 aelvfqwvkh svkrygqaev eswywelwne pnisywkgtt eeyiklydys adavkgalpt
      241 akiggpevtg pnwdvsakff rtfldhvvsg knyvtgktgs pldvitfhak gnpkvvdgiv
      301 rmdmgtqlrd inkgfeivas ypslknlpii igesdpegca acsedlhpqn ayrngtmyss
      361 ytaasfarkh eladahgvnl lgavtwafef edqpwfrgfr dlatngvdkp vlnvfrmfgm
      421 mdgnrvevkq nlaynfeklr kesvrgerdi nafatkndre aavmvwnyhd dnkiveaspv
      481 svqlsgvkak rvqvqhyrid qehsnayevw kkmgspqkpt aeqiatleha gqlqtltspq
      541 wvnvenerin lnfdlpaqgv sllkiiw
//
LOCUS       WP_235176511             547 aa            linear   BCT 02-MAR-2025
DEFINITION  M56 family metallopeptidase [Dyadobacter chenhuakuii].
ACCESSION   WP_235176511
VERSION     WP_235176511.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 547)
  AUTHORS   Lopez-Pelegrin,M., Cerda-Costa,N., Martinez-Jimenez,F.,
            Cintas-Pedrola,A., Canals,A., Peinado,J.R., Marti-Renom,M.A.,
            Lopez-Otin,C., Arolas,J.L. and Gomis-Ruth,F.X.
  TITLE     A novel family of soluble minimal scaffolds provides structural
            insight into the catalytic domains of integral membrane
            metallopeptidases
  JOURNAL   J Biol Chem 288 (29), 21279-21294 (2013)
   PUBMED   23733187
REFERENCE   2  (residues 1 to 547)
  AUTHORS   Archer,G.L. and Bosilevac,J.M.
  TITLE     Signaling antibiotic resistance in staphylococci
  JOURNAL   Science 291 (5510), 1915-1916 (2001)
   PUBMED   11245199
REFERENCE   3  (residues 1 to 547)
  AUTHORS   Zhang,H.Z., Hackbarth,C.J., Chansky,K.M. and Chambers,H.F.
  TITLE     A proteolytic transmembrane signaling pathway and resistance to
            beta-lactams in staphylococci
  JOURNAL   Science 291 (5510), 1962-1965 (2001)
   PUBMED   11239156
REFERENCE   4  (residues 1 to 547)
  AUTHORS   Brakstad,O.G. and Maeland,J.A.
  TITLE     Mechanisms of methicillin resistance in staphylococci
  JOURNAL   APMIS 105 (4), 264-276 (1997)
   PUBMED   9164468
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017390.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05569.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..547
                     /product="M56 family metallopeptidase"
                     /calculated_mol_wt=61460
     Region          131..467
                     /region_name="MecR1"
                     /note="Signal transducer regulating beta-lactamase
                     production, contains metallopeptidase domain [Signal
                     transduction mechanisms]; COG4219"
                     /db_xref="CDD:443363"
     Region          442..>546
                     /region_name="tolA_full"
                     /note="TolA protein; TIGR02794"
                     /db_xref="CDD:274303"
ORIGIN      
        1 mnfnelyfqk svqalsltli hslwqgliaa vlagiilils rkakpalryk llatllcafv
       61 iassytffyl ltsekgvsgt avtgsltasn qtavsiitsg anvvsagdhn vrigylldfs
      121 srnaqliaav wfiifafksf qatagflyvq nikkrnvhpl reswqprfdm llnklkiaql
      181 iqvvesenvl vpmvigfikp vvlipfgifa nlpeaqieai ilhelahikr rdylvnliqi
      241 fcenvfffnp allwlsrlmr eerehccddl aisvmenkts fvhalvsfqg ynlngsafem
      301 afskkrnhll drikriiynn nkplnamekl fvtislltva alsaavsqds ltsapvqvkk
      361 vtassmpapl aaveplpvav vnqdtlpkkk iepkpanaee gvevtenisl nynvdsnsni
      421 niksngisty siningkhye mvkikdkitt lmidgneipk edfpkyqqei nqvldkitee
      481 hkkaeaqrke adkhreeadk qraaadvqrr eademrtqad kqrlqadkqr kqaeenrkva
      541 eelrykk
//
LOCUS       WP_235177206             151 aa            linear   BCT 02-MAR-2025
DEFINITION  SRPBCC domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235177206
VERSION     WP_235177206.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 151)
  AUTHORS   Stark,J.L., Mercier,K.A., Mueller,G.A., Acton,T.B., Xiao,R.,
            Montelione,G.T. and Powers,R.
  TITLE     Solution structure and function of YndB, an AHSA1 protein from
            Bacillus subtilis
  JOURNAL   Proteins 78 (16), 3328-3340 (2010)
   PUBMED   20818668
REFERENCE   2  (residues 1 to 151)
  AUTHORS   Lotz,G.P., Lin,H., Harst,A. and Obermann,W.M.
  TITLE     Aha1 binds to the middle domain of Hsp90, contributes to client
            protein activation, and stimulates the ATPase activity of the
            molecular chaperone
  JOURNAL   J Biol Chem 278 (19), 17228-17235 (2003)
   PUBMED   12604615
REFERENCE   3  (residues 1 to 151)
  AUTHORS   Panaretou,B., Siligardi,G., Meyer,P., Maloney,A., Sullivan,J.K.,
            Singh,S., Millson,S.H., Clarke,P.A., Naaby-Hansen,S., Stein,R.,
            Cramer,R., Mollapour,M., Workman,P., Piper,P.W., Pearl,L.H. and
            Prodromou,C.
  TITLE     Activation of the ATPase activity of hsp90 by the stress-regulated
            cochaperone aha1
  JOURNAL   Mol Cell 10 (6), 1307-1318 (2002)
   PUBMED   12504007
REFERENCE   4  (residues 1 to 151)
  AUTHORS   Sevier,C.S. and Machamer,C.E.
  TITLE     p38: A novel protein that associates with the vesicular stomatitis
            virus glycoprotein
  JOURNAL   Biochem Biophys Res Commun 287 (2), 574-582 (2001)
   PUBMED   11554768
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08327.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..151
                     /product="SRPBCC domain-containing protein"
                     /calculated_mol_wt=16726
     Region          13..150
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(20..22,24..25,39,46,48,50,54,65,67,69,76,78,97..98,
                     100,102,111,113,115,117,128..130,133..134,136..137,
                     140..142,145)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176854"
ORIGIN      
        1 mdqplfvtns itinapapav wdalvnpekt kqymfgceai stwqpgdell wkgvadgqev
       61 vyvkgnvisi dqgkrleytt fdpndasmed vaenhlhviy elreengqti ltasqgdfat
      121 vargkdryee vfngglgwtp mlekikamle s
//
LOCUS       WP_235177291             765 aa            linear   BCT 02-MAR-2025
DEFINITION  PAS domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235177291
VERSION     WP_235177291.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 765)
  AUTHORS   Hefti,M.H., Francoijs,K.J., de Vries,S.C., Dixon,R. and Vervoort,J.
  TITLE     The PAS fold. A redefinition of the PAS domain based upon
            structural prediction
  JOURNAL   Eur J Biochem 271 (6), 1198-1208 (2004)
   PUBMED   15009198
REFERENCE   2  (residues 1 to 765)
  AUTHORS   Ponting,C.P. and Aravind,L.
  TITLE     PAS: a multifunctional domain family comes to light
  JOURNAL   Curr Biol 7 (11), R674-R677 (1997)
   PUBMED   9382818
REFERENCE   3  (residues 1 to 765)
  AUTHORS   Zhulin,I.B., Taylor,B.L. and Dixon,R.
  TITLE     PAS domain S-boxes in Archaea, Bacteria and sensors for oxygen and
            redox
  JOURNAL   Trends Biochem Sci 22 (9), 331-333 (1997)
   PUBMED   9301332
REFERENCE   4  (residues 1 to 765)
  AUTHORS   Borgstahl,G.E., Williams,D.R. and Getzoff,E.D.
  TITLE     1.4 A structure of photoactive yellow protein, a cytosolic
            photoreceptor: unusual fold, active site, and chromophore
  JOURNAL   Biochemistry 34 (19), 6278-6287 (1995)
   PUBMED   7756254
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020036.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08447.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..765
                     /product="PAS domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=86866
     Region          32..118
                     /region_name="PAS_3"
                     /note="PAS fold; pfam08447"
                     /db_xref="CDD:430001"
     Site            order(33,37,43,59..62,88,93)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(56,60,68,71..72,100,102)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          114..626
                     /region_name="KinE"
                     /note="Sporulation sensor histidine kinase E [Cell cycle
                     control, cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG5809"
                     /db_xref="CDD:444511"
     Region          <383..762
                     /region_name="TMAO_torS"
                     /note="TMAO reductase sytem sensor TorS; TIGR02956"
                     /db_xref="CDD:274362"
ORIGIN      
        1 mssvftiesl emvisginag iwdwdfetnk qtwsdrlfel leyqpdeitp gyenftemlv
       61 hpddrvivrt ainaqleqni pynvqvrlrt kfkgyryfec cgnakfidgk pvrmvgsitd
      121 iheryslrek lsvvferstd ahllidsqgv idcnkaavtm lrckdksell sihpakfspe
      181 fqpdgrrsde kslemdriah etgynrfewi hrrldgdefp vevtlnpvhv ddkmvllvvw
      241 hdishrknae elirrneaml aesqqlthsg sweadlvtnq nywsdeafri fglepnstgp
      301 ntelfskmih pddmhlyish ikdavnnlnp asfdlrivlp dgkikfihai gkpfadhtgr
      361 vvklygaimd idaqkkneqe likakeqaem aavaksqfls tmsheirtpm navigfthll
      421 lqhdpkpeqm eylnilkfsa enllvlindi ldfskieagk iefeevdfni lvllenirsg
      481 siqradekgi slelnvdeal nlnvigdpvr lgqiltnlvs navkftefgk vtisatiakr
      541 dpdsvtidfe iqdtgigipp ekldnifdsf tqatsdttrk yggsglglti tkrllelqks
      601 tinlrskpge gsafyfsltf klskkqipaq tshsvtdiks lkgmkvlive dnavniflmk
      661 nfmkqweidy dvaengliac eivqqndydl vlmdlqmpem dgyeatakir ylpdpkyaql
      721 piialtasam ldikdiafkv gmndyiskpf tpnelytkia ayrkk
//
LOCUS       WP_235177371             730 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-glucuronidase family glycosyl hydrolase [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235177371
VERSION     WP_235177371.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 730)
  AUTHORS   Nurizzo,D., Nagy,T., Gilbert,H.J. and Davies,G.J.
  TITLE     The structural basis for catalysis and specificity of the
            Pseudomonas cellulosa alpha-glucuronidase, GlcA67A
  JOURNAL   Structure 10 (4), 547-556 (2002)
   PUBMED   11937059
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03648.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..730
                     /product="alpha-glucuronidase family glycosyl hydrolase"
                     /GO_function="GO:0046559 - alpha-glucuronidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0045493 - xylan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=81819
     Region          44..713
                     /region_name="AguA2"
                     /note="Alpha-glucuronidase [Carbohydrate transport and
                     metabolism]; COG3661"
                     /db_xref="CDD:442878"
ORIGIN      
        1 mtkspflmlf sclligfkll aadpsgaeas gaeasdaeps gaeplasdgn dgyrlwlnye
       61 pvrnasvkse ylkyaafigr pasgeimqsa sqelqlglgk lldksvnitn sfagksggiv
      121 fkietsasta qpvdgyrlql sagnvivssk seqgilygtf allrhmqmql pvkglnlass
      181 prvryrmlnh wdnpdgtier gyagqslwkw yelpervdpr yadyaranas lgingtvlnn
      241 vnasarfmsq eyivkvaava nvmrkygikt ylsvyfaapk tlgglktsdp ldpqvrawwk
      301 ekvaqiykei pdfggflvka nsegepgpqd ygrthadgan mlaeafkpyd giviwrafvy
      361 kadpnadrfk aaheefvpld gkfdpkvivq vkngpidfqp repfsplfgn mpktplgief
      421 qitqeylgfa thavyeapif eecldsdtyv ngagstvaki vdgslhgyer tlmagvantg
      481 nsrnwtghpl aqanwyafgr lswdhqltse qiarewialt ltqnpkasgr italmlrsre
      541 iyvdyntplg lsrpwmgvhf apepwqnkgs rpdwtavyyh radsiglgfd rtasgsnala
      601 qyrpevqkqw nnpdqtplpy llwfhhvrwd kklstgrtlw eelctrfytg adsvvwmqqq
      661 wdlakpsldp qiytdvaerl kvqrreaiww rdswvlylqt ftkqpvpagf eppkqtfeev
      721 kksvnvylmr
//
LOCUS       WP_235177375             604 aa            linear   BCT 02-MAR-2025
DEFINITION  RagB/SusD family nutrient uptake outer membrane protein
            [Dyadobacter chenhuakuii].
ACCESSION   WP_235177375
VERSION     WP_235177375.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 604)
  AUTHORS   Goulas,T., Garcia-Ferrer,I., Hutcherson,J.A., Potempa,B.A.,
            Potempa,J., Scott,D.A. and Gomis-Ruth,F.X.
  TITLE     Structure of RagB, a major immunodominant outer-membrane surface
            receptor antigen of Porphyromonas gingivalis
  JOURNAL   Mol Oral Microbiol 31 (6), 472-485 (2016)
   PUBMED   26441291
REFERENCE   2  (residues 1 to 604)
  AUTHORS   Bolam,D.N. and Koropatkin,N.M.
  TITLE     Glycan recognition by the Bacteroidetes Sus-like systems
  JOURNAL   Curr Opin Struct Biol 22 (5), 563-569 (2012)
   PUBMED   22819666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07980.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..604
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /calculated_mol_wt=66290
     Region          48..>250
                     /region_name="SusD"
                     /note="starch binding outer membrane protein SusD;
                     cl21747"
                     /db_xref="CDD:451378"
     Region          301..604
                     /region_name="SusD_RagB"
                     /note="SusD family; pfam07980"
                     /db_xref="CDD:429768"
ORIGIN      
        1 mksikniita aliaslstgc ekvleehpqs qivptyfnsp agvlggiagv yndirgqwgt
       61 egftvemqag tdefiqgvng gggpaytyng lnssnfgsaw gvafqdintl ngvlqygati
      121 dlpeatrkqy laqakflraf wyfylvqtwg dvplhtefit vpsqaasrqp aadvyaliiq
      181 dlteaaadlp nqptapflgk aatkpvaqll lakayltrgw lnntasdftq aaticddiia
      241 kkadygldlw qdygdafvpa ndygketmfv sdhvldpkyg yyqvggqagg gaaqnlspwf
      301 tnwnypnnsg insiknaaga fvnngtsgmi rdsyygrpyv rmrpnsdkia ngpragknyf
      361 ldqaftnrkv dsryansfyt vyisntavkn eantannlrg isyttvpgvd tavwlpdyev
      421 pgapqfvgtr pfkgivvpps lwnngifpal kkfmdpsrga nfndpstrpa vlyrfsdvym
      481 tgaeayfkag nnakaaalin vvrqraafrk anttaenaaa atamtitaaq vtldfilder
      541 sreffgewqr whdlvrtrsl vrrvqewnqe aaqyvkdfnm lrpipqsqid rvvegpkfpq
      601 nsgy
//
LOCUS       WP_235177383             224 aa            linear   BCT 02-MAR-2025
DEFINITION  outer membrane beta-barrel protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235177383
VERSION     WP_235177383.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024895.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13505.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..224
                     /product="outer membrane beta-barrel protein"
                     /calculated_mol_wt=24708
     Region          6..224
                     /region_name="OMP_b-brl"
                     /note="Outer membrane protein beta-barrel domain;
                     pfam13505"
                     /db_xref="CDD:463903"
ORIGIN      
        1 mkkissivfs iillsfsaka qqfkrvgvgi yggpqlfgki ytssnldkit gftagidlry
       61 alskepegfa ihfqpgfntf rhfkeegkht qlytettwqw savhlplllr ytfssgkvrp
      121 faeigptlrl rqsltlktng ygcgiagcsg retdqdmqsi tskdaialta gaglevdlwk
      181 vtipisvriq egfgtyatkv lfyespgfdn lktrtiqlna gmnf
//
LOCUS       WP_235177408             229 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3823 domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235177408
VERSION     WP_235177408.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024272.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12866.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..229
                     /product="DUF3823 domain-containing protein"
                     /calculated_mol_wt=24971
     Region          33..120
                     /region_name="DUF3823"
                     /note="Protein of unknown function (DUF3823) N-terminal
                     domain; pfam12866"
                     /db_xref="CDD:432840"
     Region          123..225
                     /region_name="DUF3823_C"
                     /note="Domain of unknown function (DUF3823_C); pfam18003"
                     /db_xref="CDD:465612"
ORIGIN      
        1 mkanhihfkf lavlalsall sacekdnrve pksvltgrvv yegqpiglrs ngvqlelwqr
       61 gyqlftkipv hvrqdgtfsa slfdgnyklv rlrgngpwvd ntdtidvaln gsaaldvpvq
      121 pyfvfqneny akgegkvsvt fnlkqintsr tlervnlyig ttsivdpnnn agnaqevaan
      181 ikdiskpitl tatlspalag rdyvyarvgv ktsgvgemlf gmpqkvmlk
//
LOCUS       WP_235177397             157 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6644 family protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235177397
VERSION     WP_235177397.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042488.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20349.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..157
                     /product="DUF6644 family protein"
                     /calculated_mol_wt=17479
     Region          30..157
                     /region_name="DUF6644"
                     /note="Family of unknown function (DUF6644); pfam20349"
                     /db_xref="CDD:466499"
ORIGIN      
        1 mldfldwlek tswavgirqs lwlypileiv hilgivmlvg pafmfdlrll gfskniplas
       61 laehllpwsr rsllliipsg allfitnana lgvdptfwtk msfigigain vfvfhrfvfr
      121 sgstnpdtyf sfqtkitacv siavwiatia cgrllay
//
LOCUS       WP_235177013             438 aa            linear   BCT 02-MAR-2025
DEFINITION  BNR-4 repeat-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235177013
VERSION     WP_235177013.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 438)
  AUTHORS   Roggentin,P., Rothe,B., Kaper,J.B., Galen,J., Lawrisuk,L.,
            Vimr,E.R. and Schauer,R.
  TITLE     Conserved sequences in bacterial and viral sialidases
  JOURNAL   Glycoconj J 6 (3), 349-353 (1989)
   PUBMED   2562507
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027224.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15892.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..438
                     /product="BNR-4 repeat-containing protein"
                     /calculated_mol_wt=50190
     Region          51..321
                     /region_name="BNR_4"
                     /note="BNR repeat-containing family member; pfam15892"
                     /db_xref="CDD:435002"
ORIGIN      
        1 mkirllllaf vclsvklnaq svstltedga wcwfsdprai ytndkngqiv tgwvtklgdi
       61 vaasldlksg ktaqktlytk leiddhdnpa flqlpdnril tqytwhggsk ngmgviqntt
      121 lkpldittfs dsvifkpqtp ellakfkret ytyanpflls sennkiysfg rwigfkpnfi
      181 tstdngktws dpkvvitska ldtnnrpyvk yysdgkskih llftdghpna eplnsvyycy
      241 yekdafwrad gtkiadidql pfhpsdatvv ykatpetgka wifdmvidpk grpvvaytry
      301 ptnenhqyyy tvfdgkkwnd hhlidsgkwf pqtpegkker eenysgglti dsldpsivyf
      361 shevgnvfei skgetrdlgk twkitpvtrn seldnvrpvi prykkkgdkn vllwmqnrky
      421 vhytdydtri vwkdltar
//
LOCUS       WP_235177418             357 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Dyadobacter chenhuakuii].
ACCESSION   WP_235177418
VERSION     WP_235177418.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 357)
  AUTHORS   Mengin-Lecreulx,D., Texier,L., Rousseau,M. and van Heijenoort,J.
  TITLE     The murG gene of Escherichia coli codes for the
            UDP-N-acetylglucosamine: N-acetylmuramyl-(pentapeptide)
            pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
            involved in the membrane steps of peptidoglycan synthesis
  JOURNAL   J Bacteriol 173 (15), 4625-4636 (1991)
   PUBMED   1649817
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016027.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04101.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..357
                     /product="glycosyltransferase"
                     /GO_function="GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=38752
     Region          1..350
                     /region_name="COG4671"
                     /note="Predicted glycosyl transferase [General function
                     prediction only]"
                     /db_xref="CDD:443708"
ORIGIN      
        1 msanfafyih hhgsghlmra lsiasqlkda rvtflgsdlt rfaaiipati qcidlphdvp
       61 gpedpfasrm qlgflhyapv nvekvakrta visaalhalf pvilmvdvsv evtllatlcg
      121 tptvvirqng drddlahlha yesaqlliap speelmnpsp qdwvnqktff sggfskysgn
      181 ekfaektenp aigvlvgsgg tsingkvina laaqcpersi lvignvadhe hiaahsvifh
      241 gqindpasvl aqcrvvigna ghntvmemad lgkkfvcipe drpfqeqlrk aglldqngma
      301 vlvqpeeldr tdwktiiqka enlpddcwkg vikdsaladv alrlhklwda nfperla
//
LOCUS       WP_235177441             398 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4856 domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235177441
VERSION     WP_235177441.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027474.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16148.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..398
                     /product="DUF4856 domain-containing protein"
                     /calculated_mol_wt=42441
     Region          63..396
                     /region_name="DUF4856"
                     /note="Domain of unknown function (DUF4856); pfam16148"
                     /db_xref="CDD:435169"
ORIGIN      
        1 mlqhfnlrnv lfasmlvagl sscsddeerp idpspgpelr tkidyakitp ttpykslfid
       61 tkgdttvdlt sgnarfkmfq alnyylgsav rdstqvtaav mknmyantgn pftdiststi
      121 nvkgadlnas gvqlhdvtas sktaaeadaa rahletsfaa leaasksvkv paakgvagkl
      181 gtylvdskgi ehgqiiqkgl igalqmdyig nvlldkglev dnislvsgkk ytalehnwde
      241 ayglltlnpv ylagatdaar tsnesfigsy iweynkasya kihpafvkgr aaivnmdnae
      301 vktqatfirt emekaiasaa lgylgkwksg ttdaarahai geglgfiysl ryckingada
      361 afsdalllgl mgspngfwdl tndkinaasd aitakfkl
//
LOCUS       WP_235177466             299 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Dyadobacter chenhuakuii].
ACCESSION   WP_235177466
VERSION     WP_235177466.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..299
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=31166
     Region          2..299
                     /region_name="PRK06128"
                     /note="SDR family oxidoreductase"
                     /db_xref="CDD:180413"
ORIGIN      
        1 msettkaslq npltkypkpp fnkqpqqvpg laskmdpkpd hgensykgsg rlagrkalit
       61 ggdsgigraa aiayaregad vainylpqeq sdadeviali eaegrkgyai pgditqesfc
      121 qelvaqavqk lggldilvnn aghqqavdsl lditsegfdt tiktniyapf witkaalphl
      181 aegsviiats svqaydpsen lfdyaqtkaa nvayvkslak qlgpkgirvn gvapgpvwtp
      241 lqvsggqpqd kivefgeatp lgrpgqpael asifvqlada easyatgqiy gaagggghp
//
LOCUS       WP_235177518             142 aa            linear   BCT 02-MAR-2025
DEFINITION  D-Ala-D-Ala carboxypeptidase family metallohydrolase [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235177518
VERSION     WP_235177518.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019896.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08291.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..142
                     /product="D-Ala-D-Ala carboxypeptidase family
                     metallohydrolase"
                     /calculated_mol_wt=15964
     Region          5..128
                     /region_name="Peptidase_M15_3"
                     /note="Peptidase M15; cl42048"
                     /db_xref="CDD:455393"
ORIGIN      
        1 mqltknftle emirsstasr rgfneqfkpg peiisnlqgl ctnilqplrd yimmpifvss
       61 gyrceqlnka vggvknsqhl tgeaadlqav gamencelfe aikkaklpfd qllwefgdgq
      121 npdwvhvsfs pqnrrqvlyi gr
//
LOCUS       WP_235177555             244 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6962 family protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235177555
VERSION     WP_235177555.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046230.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22285.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..244
                     /product="DUF6962 family protein"
                     /calculated_mol_wt=27579
ORIGIN      
        1 mnevaidfsk vhqiqvfgit vlepstviss lmmtviciya fvhlgklgra hrmykqiqyf
       61 fffmgiatai ggvlghgfly ltgqpgkipg wfasmiaval feraaiwhik pllqkrsgli
      121 lgwlnyvela vffaltfitl nfvvveihaf yglflmlfli eiyvyrqrkd pgsinifiat
      181 algavsaglh alkfsfgpwf nyndishism gasiwfyyqg arhmiyygee mikpeeiles
      241 eses
//
LOCUS       WP_235177581             223 aa            linear   BCT 02-MAR-2025
DEFINITION  outer membrane beta-barrel protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235177581
VERSION     WP_235177581.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024895.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13505.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..223
                     /product="outer membrane beta-barrel protein"
                     /calculated_mol_wt=24969
ORIGIN      
        1 mknitiilll liclpcmplr aqetvkneve tadskwkfgv nggygqrvfr srpifdndrk
       61 ryvkdfksgi syggevayfp wkkvgfgvky dryqskasqg nvmtedvaiq flggevihka
      121 imknpknail tslllgyqpy rnhtqvgdna ftfngktmgw gvsvgaehrf srkfalnltg
      181 sammgavfrl qrktdintet lhlskddsvd lsrvsvslgf sff
//
LOCUS       WP_235177756             175 aa            linear   BCT 02-MAR-2025
DEFINITION  5' nucleotidase, NT5C type [Dyadobacter chenhuakuii].
ACCESSION   WP_235177756
VERSION     WP_235177756.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 175)
  AUTHORS   Rampazzo,C., Kost-Alimova,M., Ruzzenente,B., Dumanski,J.P. and
            Bianchi,V.
  TITLE     Mouse cytosolic and mitochondrial deoxyribonucleotidases: cDNA
            cloning of the mitochondrial enzyme, gene structures, chromosomal
            mapping and comparison with the human orthologs
  JOURNAL   Gene 294 (1-2), 109-117 (2002)
   PUBMED   12234672
REFERENCE   2  (residues 1 to 175)
  AUTHORS   Rampazzo,C., Johansson,M., Gallinaro,L., Ferraro,P., Hellman,U.,
            Karlsson,A., Reichard,P. and Bianchi,V.
  TITLE     Mammalian 5'(3')-deoxyribonucleotidase, cDNA cloning, and
            overexpression of the enzyme in Escherichia coli and mammalian
            cells
  JOURNAL   J Biol Chem 275 (8), 5409-5415 (2000)
   PUBMED   10681516
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018627.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06941.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..175
                     /product="5' nucleotidase, NT5C type"
                     /GO_function="GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009264 - deoxyribonucleotide catabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=20151
     Region          1..172
                     /region_name="YorC"
                     /note="5'(3')-deoxyribonucleotidase [Nucleotide transport
                     and metabolism]; COG4502"
                     /db_xref="CDD:443586"
ORIGIN      
        1 mrnsiaidmd nvivdietnw inwyekefgv kierkellgk pedeafpdpa aalsliyktg
       61 ffrhapiieg aqeallklqe hydifivsaa mefpnslpek ydwlnehfpf iswknivfcg
      121 dkriidtdyl iddhlknldf ckgtpilfta shnvnvtkhk rvnnwneala llgve
//
LOCUS       WP_235177769             336 aa            linear   BCT 02-MAR-2025
DEFINITION  thioredoxin domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235177769
VERSION     WP_235177769.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024853.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13462.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..336
                     /product="thioredoxin domain-containing protein"
                     /calculated_mol_wt=38119
     Region          <32..>88
                     /region_name="SurA_N_3"
                     /note="SurA N-terminal domain; cl21568"
                     /db_xref="CDD:473912"
     Region          191..335
                     /region_name="DsbG"
                     /note="Protein thiol-disulfide isomerase DsbC
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1651"
                     /db_xref="CDD:441257"
ORIGIN      
        1 mqttsllkil gmfcivlvai cscekqaekr ivavvegeai sleevdklik nslyeylfai
       61 ydvrrialne linsrmiske akalhvrvds vtslrisemk qkltkdqyvs dnalqhgvvd
      121 eenpfklipl hteegqrile ksyvkflnqm lnkelsakyr vkisleppet pkldlrgtvt
      181 yarrnmqsln vvtivsdfdc pvcqskvpvf kqlfmkygdr vrfeyvhlsp sisksilfsa
      241 caakqgkfwe ahdllfrmgq ngsqeieslm tslnldpkac kacmesdkva deinasmeql
      301 ralgikvtpt iiinnriyyg eiseevmgqf iekslk
//
LOCUS       WP_235177849             334 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Dyadobacter chenhuakuii].
ACCESSION   WP_235177849
VERSION     WP_235177849.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 334)
  AUTHORS   Tavladoraki,P., Schinina,M.E., Cecconi,F., Di Agostino,S.,
            Manera,F., Rea,G., Mariottini,P., Federico,R. and Angelini,R.
  TITLE     Maize polyamine oxidase: primary structure from protein and cDNA
            sequencing
  JOURNAL   FEBS Lett 426 (1), 62-66 (1998)
   PUBMED   9598979
REFERENCE   2  (residues 1 to 334)
  AUTHORS   Tsugeno,Y. and Ito,A.
  TITLE     A key amino acid responsible for substrate selectivity of monoamine
            oxidase A and B
  JOURNAL   J Biol Chem 272 (22), 14033-14036 (1997)
   PUBMED   9162023
REFERENCE   3  (residues 1 to 334)
  AUTHORS   Schilling,B. and Lerch,K.
  TITLE     Cloning, sequencing and heterologous expression of the monoamine
            oxidase gene from Aspergillus niger
  JOURNAL   Mol Gen Genet 247 (4), 430-438 (1995)
   PUBMED   7770050
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..334
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=36155
     Region          <19..330
                     /region_name="Amino_oxidase"
                     /note="Flavin containing amine oxidoreductase; pfam01593"
                     /db_xref="CDD:396255"
ORIGIN      
        1 medkldiiii gaglagltlr qpgalistla spagtfadkv rmlglklklt gksideiftg
       61 setttmaylh dagfsqrmig qffkpfmtgi fledklstss rmfefvfkmf sqgdaavpak
      121 gmgmiplqla sslasneiaf gqkvvsidan nvttsagqvh satsiliatd qleipdpfrk
      181 lpysyhsvtn myftsaakpy dkplialnam ygklvtniav mnqiapaysk ngdalislsl
      241 igdhskadsa qlqgqvlrem ltwfpeamqw khlktyhfgy alpnddqvin vpgndairlt
      301 eqcficgdhl lngsinaamk sgrlaaeaii srqk
//
LOCUS       WP_235177915             678 aa            linear   BCT 02-MAR-2025
DEFINITION  BspA family leucine-rich repeat surface protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235177915
VERSION     WP_235177915.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015347.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03382.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..678
                     /product="BspA family leucine-rich repeat surface protein"
                     /calculated_mol_wt=76426
     Region          <167..268
                     /region_name="DUF285"
                     /note="Mycoplasma protein of unknown function, DUF285;
                     pfam03382"
                     /db_xref="CDD:427272"
     Region          224..343
                     /region_name="DUF285"
                     /note="Mycoplasma protein of unknown function, DUF285;
                     pfam03382"
                     /db_xref="CDD:427272"
     Region          374..493
                     /region_name="DUF285"
                     /note="Mycoplasma protein of unknown function, DUF285;
                     pfam03382"
                     /db_xref="CDD:427272"
     Region          602..676
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     pfam18962"
                     /db_xref="CDD:436869"
ORIGIN      
        1 mrnkwsisii kltvfavkrl hgsaaifima llllqittvh aqkppriplp fittwqtttr
       61 enptskhiif pgwgrnytif wtgrvggrtv ygqlagngat ridfpapgty qvrvgpgsgt
      121 fyrfmmhese rtkllrvdqw gsvvwssmgs afknchnmdv vatdipdlsq vidmssmfea
      181 clvltgnarf ndwntanvkt mkglfntakl fnqpistwnt gnvtdmsnmf qfawrfnkpi
      241 gnwntgkvin msymfaytna fdqpignwnt anvtnmshmf esaqafnqpi gnwntanald
      301 innmfsstkl fnqpinswnt skitdmhslf yfamafnqpm gswdtgnvtk mtamfcynhv
      361 fnqpignwnt rnvtdmnlmf smasafnqpi ggwdtgkvtn mrsmfygnkv fnqplgnwnt
      421 aavtnmaymf ygnasfnqsl enwntsrvad msnmfdhats fnqpvknwnt aavtsmaymf
      481 rsafafdqhl gnwqvgnvqs mymmldstdm skdnydqmyi nwerqtlqpr vvlgattlty
      541 ckgstfrnli vyrygwvilg dkkdcsdcsg crtesddvaa isneqdldgf skseimtdad
      601 fvypnpasdk lyiknnsgtv hslsitdavg rtrltqnttn nnpggaeist thlpsgvyli
      661 tmfqkngssk sqkiiirk
//
LOCUS       WP_235177904             281 aa            linear   BCT 02-MAR-2025
DEFINITION  chromate resistance protein ChrB domain-containing protein
            [Dyadobacter chenhuakuii].
ACCESSION   WP_235177904
VERSION     WP_235177904.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 281)
  AUTHORS   Branco,R. and Morais,P.V.
  TITLE     Identification and characterization of the transcriptional
            regulator ChrB in the chromate resistance determinant of
            Ochrobactrum tritici 5bvl1
  JOURNAL   PLoS One 8 (11), e77987 (2013)
   PUBMED   24223748
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 281)
  AUTHORS   Juhnke,S., Peitzsch,N., Hubener,N., Grosse,C. and Nies,D.H.
  TITLE     New genes involved in chromate resistance in Ralstonia
            metallidurans strain CH34
  JOURNAL   Arch Microbiol 179 (1), 15-25 (2002)
   PUBMED   12471500
  REMARK    Erratum:[Arch Microbiol. 2004 May;181(5):390]
REFERENCE   3  (residues 1 to 281)
  AUTHORS   Nies,A., Nies,D.H. and Silver,S.
  TITLE     Nucleotide sequence and expression of a plasmid-encoded chromate
            resistance determinant from Alcaligenes eutrophus
  JOURNAL   J Biol Chem 265 (10), 5648-5653 (1990)
   PUBMED   2180932
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021357.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09828.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..281
                     /product="chromate resistance protein ChrB
                     domain-containing protein"
                     /calculated_mol_wt=32459
     Region          <1..148
                     /region_name="ChrB1"
                     /note="Chromate resistance protein ChrB1 [Inorganic ion
                     transport and metabolism]; COG4275"
                     /db_xref="CDD:443416"
     Region          <190..278
                     /region_name="AraC"
                     /note="AraC-type DNA-binding domain and AraC-containing
                     proteins [Transcription]; COG2207"
                     /db_xref="CDD:441809"
ORIGIN      
        1 mkwitrerpk idriacpwli krfidpdaqi fffpfdqvka kaaelgatpf dipdtefthy
       61 edrctfdffl eryeiedpal kdmaviirga dtddhslaaq ssglwaisag laynitddqe
      121 llekgmliyd alyswathlq kqkhtqnpte klllavfnty ldkqksehlk tpkwakelke
      181 iiqdqidtnl slslkeiseg lqihpsyvsr efskyfsnls fgeyirklri ekavdllanp
      241 dhtlseiayl tgfsdqshfn rifkaqtgqn psdfrknlpk k
//
LOCUS       WP_235177981             782 aa            linear   BCT 02-MAR-2025
DEFINITION  protein kinase domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235177981
VERSION     WP_235177981.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 782)
  AUTHORS   Hunter,T. and Plowman,G.D.
  TITLE     The protein kinases of budding yeast: six score and more
  JOURNAL   Trends Biochem Sci 22 (1), 18-22 (1997)
   PUBMED   9020587
REFERENCE   2  (residues 1 to 782)
  AUTHORS   Hanks,S.K. and Hunter,T.
  TITLE     Protein kinases 6. The eukaryotic protein kinase superfamily:
            kinase (catalytic) domain structure and classification
  JOURNAL   FASEB J 9 (8), 576-596 (1995)
   PUBMED   7768349
REFERENCE   3  (residues 1 to 782)
  AUTHORS   Hanks,S.K. and Quinn,A.M.
  TITLE     Protein kinase catalytic domain sequence database: identification
            of conserved features of primary structure and classification of
            family members
  JOURNAL   Methods Enzymol 200, 38-62 (1991)
   PUBMED   1956325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00069.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..782
                     /product="protein kinase domain-containing protein"
                     /GO_function="GO:0004672 - protein kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006468 - protein phosphorylation
                     [Evidence IEA]"
                     /calculated_mol_wt=87203
     Region          125..>393
                     /region_name="SPS1"
                     /note="Serine/threonine protein kinase [Signal
                     transduction mechanisms]; COG0515"
                     /db_xref="CDD:440281"
     Region          436..779
                     /region_name="LanC_like"
                     /note="Cyclases involved in the biosynthesis of
                     lantibiotics, and similar proteins; cl04955"
                     /db_xref="CDD:471159"
ORIGIN      
        1 masnqlyilp edvqvlpvea lpeqalakfe yeaddfivty kqarntskii dassasllqe
       61 frkpkslpeg vltyalmnnl daqkilegsy tflaklrneg flvsyddtfg agnqflkadd
      121 rfkdyeivsk ldgvadteiy kikrngqyya lkllktskkt pqllanfyne idilnaldga
      181 inpalaehge ygtdhylime wvdgetclqa aekyhnlhdq snvlalidic crilhaythl
      241 hsqgiihsdv hpaniivaas gelkiidfgl srmvandqvp argglgfffe peyaqavlda
      301 kpappstfag eqyalgally qiftgkqyln fsfdkktlft qiasetpvpf ssldiiindn
      361 iektifkals krkedryeri edfylammkv qesfpdgfae dkkmsvqvfr dsilkdyglt
      421 gnlvktglql apkssvnfga agiaymllrk alvnsgaetl aladvwsdra sgykhdpeng
      481 fyskdmdltp sivglssiyh tpsgvdlvqa lisqaagdyg syynavrnfl vhasqpcenl
      541 dltlgksaal igsslilenm psydrftknd llafgkntme eiwsaidaya aiseknpiny
      601 rgiahgwagi lyatlkwckt seqhlpvrff erveqlvslg iaeaghlrwe isntepvswt
      661 gwchgsagyt flwtalfhft shehyldlat ktanhflnaa qpgmngslcc grsgecyall
      721 svynatkndf ylteakriak qmlphiysgq mrnhslykgn igaavlfeel erpefarmpl
      781 fe
//
LOCUS       WP_235178005            1244 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4347 domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235178005
VERSION     WP_235178005.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025611.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14252.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1244
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..1244
                     /product="DUF4347 domain-containing protein"
                     /calculated_mol_wt=132426
     Region          34..195
                     /region_name="DUF4347"
                     /note="Domain of unknown function (DUF4347); pfam14252"
                     /db_xref="CDD:433811"
     Region          339..409
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          398..462
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          453..523
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          513..>990
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          540..651
                     /region_name="Big_5"
                     /note="Bacterial Ig-like domain; pfam13205"
                     /db_xref="CDD:463809"
     Region          1174..1238
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mkkrtftlsf fllsllafsi vtyqkfsrkt vsdlviides lkdfrsladg lspgseviyv
       61 snsregfqkl tkqlaargka ervhimthgt dgnfvlgqtq lndaniaehn sfwqslgnvl
      121 evgksslliy sceltasrsg egfvqrihrm lgvpvaasdd qtgsarrggd wdleyvvgki
      181 vkehvftilk fngllvpafs qltggsspfs aitisgddql iygdfdadgd idihsypggt
      241 vnefwqnngs gsfakvtgfa dpfekvnena vfysasgafv adwdndgddd iyvpmrnsnq
      301 neknfyyrnd ngkyellsga sspfsginvs gnnqlifgdf dndgdvdlhn ypgnnldnqf
      361 wrnngsgafs nvtgsqnpfd glpgkaafss aqyahvedwd ndgdvdifvs rvggnsvrdy
      421 yrndngvysl ktggenpfng mtiasdnqil sgdfdsdgdi dlhtsdgsvt lvfwqnngsg
      481 vftqvtgagn pfnslpnsga fynnamkafv adwdndgdad vfttnytgan qkyffqqngt
      541 ppritatspt naatgisvss nisltfsqav tgaagkyiqi rrlyddavfa tiaansaqvt
      601 gngsntitid pttdleggtt yyviidkaaf adtegrifeg vsgatwlrft tgipavaptv
      661 ttasaseial ttakvggevt anggaavtdy givwstsaap tielsnkvgi gsgngafstt
      721 vtglpagtri ylrayatnsi gtsygseidf ytqtsvtsvt rlssnptneg tvsyqvvfaq
      781 svtiddasvf tmstsgvsga svsgisgsgt tydvsintgs gngsiklevt gltgtipnln
      841 aaftsadayt iykvsnagds yrtavtdgtw ntpgdwqssq dnsfwitass fpnasaastv
      901 itsghtmrmp dnisfnvnnf tvngllqsgt gvhsvsgsfd nngeirgnat flhnsftnag
      961 tlapgespgt lafasefant gtllveiggt taitdydqfq sgpftaggti tvsfingftp
     1021 algdafilld agiitgtfat vnlpdiapli wettytdgkf tiraiidpmp vtlvdfkask
     1081 nesavelawt tssevnsshf eiqrsaegkv wekvgsvatr nenseiqryr fidplplhad
     1141 nfyrlrmvdt dgtfafskie hvrfadskgq vkgypnpvtd rvfldaptag tiqsvqiyst
     1201 sgllhyagdy tsagidvkal ptgifilkat gadnrvstfh fakh
//
LOCUS       WP_235178007             575 aa            linear   BCT 02-MAR-2025
DEFINITION  RagB/SusD family nutrient uptake outer membrane protein
            [Dyadobacter chenhuakuii].
ACCESSION   WP_235178007
VERSION     WP_235178007.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 575)
  AUTHORS   Goulas,T., Garcia-Ferrer,I., Hutcherson,J.A., Potempa,B.A.,
            Potempa,J., Scott,D.A. and Gomis-Ruth,F.X.
  TITLE     Structure of RagB, a major immunodominant outer-membrane surface
            receptor antigen of Porphyromonas gingivalis
  JOURNAL   Mol Oral Microbiol 31 (6), 472-485 (2016)
   PUBMED   26441291
REFERENCE   2  (residues 1 to 575)
  AUTHORS   Bolam,D.N. and Koropatkin,N.M.
  TITLE     Glycan recognition by the Bacteroidetes Sus-like systems
  JOURNAL   Curr Opin Struct Biol 22 (5), 563-569 (2012)
   PUBMED   22819666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07980.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..575
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /calculated_mol_wt=65373
     Region          61..535
                     /region_name="SusD"
                     /note="starch binding outer membrane protein SusD;
                     cl21747"
                     /db_xref="CDD:451378"
     Region          <428..575
                     /region_name="SusD_RagB"
                     /note="SusD family; pfam07980"
                     /db_xref="CDD:429768"
ORIGIN      
        1 mkrhniskyi lrfaacalls vtagctnlde elydritsen flqtrddvtr dflrafehsy
       61 wsiqggstfm lqenssdemm tinrqgdwfd ggqfqrvhyh twtaqdgfts dpwnalyggv
      121 tlatnsledl egitdpskfd mtreeldgmi aelkvlrawl nirlldfyrn ivivtkvkgq
      181 tegglqvppq eafafieqel kealpklstn ttlgnnvsgr wtkggaaall vrlylnakvy
      241 tgtdrfkdce tmaqeiidgk ygdyaletrw dapfdytnpt sketmfgfpg sfaqthwqyd
      301 ggmyfwmlpn lapsyfgftd fgnanpkyam qpgrdvdsve ysftlgkpfi kfqkykddlr
      361 lkkyknlgns kregmflygy lpyknasgka dtvkgfkgpy plflrdqvge fldakpgtki
      421 adkvsnmnng dnnsglypvk ypyypsddqn kissayaeir faeiyyslae ckyragnkaa
      481 aatllnavrk rnypagspsl ykangaeltd qemldewmre flaegrrrtd lirwgvfntg
      541 swwdkkpdad nhteifpigq nvlnsspqlk qnpgy
//
LOCUS       WP_235178055             415 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4374 domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235178055
VERSION     WP_235178055.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14298.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..415
                     /product="DUF4374 domain-containing protein"
                     /calculated_mol_wt=43815
     Region          29..401
                     /region_name="DUF4374"
                     /note="Domain of unknown function (DUF4374); pfam14298"
                     /db_xref="CDD:433849"
ORIGIN      
        1 mksaiksitl glglgiflaa ctsddnnvnp tpgggdggkt kyvisalpvg stgiadyllt
       61 aesltsgtvs tvgngkeqdg tyryyvthkn rffsllygqg npgavttynl dgkgelnkvs
      121 dfqaetvqvf apvaddvlti kvprsgnesa sfyridaaqs kivgeaqvni vklagngera
      181 hftwatqvgd kvyapymsik gvapdafgta ypdsawiavl sypaltvekv ikdnrigfig
      241 ryfnnglavd eqgdvyaysa svgtnagkit stkpsaivri kagttefdks ylfnveqaag
      301 gynissqlyv gkgnfiltmt spaekgayai gkrfaavnvy eqtfkwiegm pdaanianvt
      361 ttnytpkdgk agyigitqtd gasyvyevda vaakgtrglk veggvitain vlnye
//
LOCUS       WP_235178120             406 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase [Dyadobacter chenhuakuii].
ACCESSION   WP_235178120
VERSION     WP_235178120.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012371.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00144.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..406
                     /product="serine hydrolase"
                     /calculated_mol_wt=44578
     Region          57..404
                     /region_name="AmpC"
                     /note="CubicO group peptidase, beta-lactamase class C
                     family [Defense mechanisms]; COG1680"
                     /db_xref="CDD:441286"
ORIGIN      
        1 mknhlfktvs cglmlgavlf stsckdqeil senekveldg sdesaklgvp tkfdevafan
       61 rietylenkv agfgysiikd gkefyvnngg dgyarkkies nfefhganar qeivattqyv
      121 tavavmrvle kynltlghtv hnylpkgwvp sasfkaltfe rllahrtgli dyanlndlek
      181 tvegpinttv fnekayqfsd anyellalil pyvhakelak qgdsgllntl nsqptnssvy
      241 yvattiygnf vrtyvfgaag lehadkiewr awsptgplsa ekatkgypsr sgsepgllke
      301 dnlinggatg lyisasqfak lqyavktfkv ikmesvfamk nkllgfdgkl ngskgayywk
      361 rgngkncetm vidfgsvqva vfanspesei sdpvvlakmf esslhp
//
LOCUS       WP_235178127             138 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6157 family protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235178127
VERSION     WP_235178127.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039673.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19654.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..138
                     /product="DUF6157 family protein"
                     /calculated_mol_wt=15428
     Region          3..138
                     /region_name="DUF6157"
                     /note="Family of unknown function (DUF6157); pfam19654"
                     /db_xref="CDD:437486"
ORIGIN      
        1 mkthttnyfd tfiqvaedsq akagevpptk gaeksvaniq feiisahpyq ytsddvlfqt
       61 yavrqgldet eleaerekff skgqpclras pltkrygwgv hsnaegkval ygleskeynk
      121 lssdeklktv kamrskra
//
LOCUS       WP_235178128             146 aa            linear   BCT 02-MAR-2025
DEFINITION  PIN domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235178128
VERSION     WP_235178128.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021634.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10130.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..146
                     /product="PIN domain-containing protein"
                     /calculated_mol_wt=16394
     Region          1..144
                     /region_name="COG5378"
                     /note="Predicted nucleic acid-binding protein, contains
                     PIN domain [General function prediction only]"
                     /db_xref="CDD:444143"
ORIGIN      
        1 mivvidtnil fsacispnnr iseilfsplp nieriscyya maelfkhqak ivqlskqpie
       61 avstllytim kqvdflnekm iatehfeead rltagvdsnd lafvalslqk ngmlwtgdkk
      121 ltnhlkslgf nrvvntndly elldis
//
LOCUS       WP_235178171             336 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-binding dehydrogenase [Dyadobacter chenhuakuii].
ACCESSION   WP_235178171
VERSION     WP_235178171.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00107.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..336
                     /product="zinc-binding dehydrogenase"
                     /calculated_mol_wt=35969
     Region          1..336
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
     Site            order(38..40,43,140,144,165..168,170..171,189..190,194,
                     209,236..237,258..259,283..285)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176227"
ORIGIN      
        1 mkaaviknlh eplvieevek pqagsgeviv qlkaaslnhr dvwiqkglyp kittpiipgs
       61 dgagivsevg egvdpawigk evlinpshnw gdnpafygad hkilglpdng tfaefvkvea
      121 rylvkkpayl sfeqaatlpl galtawralh tranfqsgdk vlvtgagggv alfviqfaia
      181 agaevwvtsg sdqkiqkaie lgvkgginyk nptwfrdllv kargpklgyf nviidsagga
      241 gfaklidiaa pgaricfygg gtgnitdivp akvffkqlni igttmgtese fqemisfvee
      301 keiipiidti fpldqaekal rlmdsgqqfg kivlki
//
LOCUS       WP_235178187             509 aa            linear   BCT 02-MAR-2025
DEFINITION  M28 family peptidase [Dyadobacter chenhuakuii].
ACCESSION   WP_235178187
VERSION     WP_235178187.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016289.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04389.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..509
                     /product="M28 family peptidase"
                     /calculated_mol_wt=55481
     Region          118..>199
                     /region_name="PA"
                     /note="Protease-associated (PA) domain. The PA domain is
                     an insert domain in a diverse fraction of proteases. The
                     significance of the PA domain to many of the proteins in
                     which it is inserted is undetermined. It may be a
                     protein-protein interaction domain. At...; cl28883"
                     /db_xref="CDD:333703"
     Region          264..489
                     /region_name="Iap"
                     /note="Zn-dependent amino- or carboxypeptidase, M28 family
                     [Posttranslational modification, protein turnover,
                     chaperones, Amino acid transport and metabolism]; COG2234"
                     /db_xref="CDD:441835"
ORIGIN      
        1 mkfnknfllf icclpllnqt ayaqkktnsl pefqikkadt eahmrflaad ellgrrtgeq
       61 gnlvaaryia eqfrklgvvp vpgngtnnst yfqnvpfekm gangsgeiia daevmksgvd
      121 wilmngdemt vkapiayasf glvnaaknqd dykdldvkgk ivlvesgtae tqtpreiint
      181 snekrktamd kgaiavielf napipwnvvt knfsgeklsl iegtgaeksi phvwingkea
      241 kyaralraak evefktsgrk sqnvnsynvv gyiagtdpkl keeyvllsah ydhigigkqg
      301 gqpytaedsi fngardnafg tvalltaaea ltksppkrsv livaltgeei gllgskyyas
      361 hplmplnkci fninsdgagy ndttivsvmg ldrtgaraei eaackafglg ifadpspeqg
      421 lfdrsdnvnf akegipaptf tpgfkefngd imknyhqvsd npetidfnyl lkfsqayaya
      481 trliadrkva pqwiagdkye aagkklygk
//
LOCUS       WP_235178290             463 aa            linear   BCT 02-MAR-2025
DEFINITION  S41 family peptidase [Dyadobacter chenhuakuii].
ACCESSION   WP_235178290
VERSION     WP_235178290.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015531.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03572.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..463
                     /product="S41 family peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=51683
     Region          25..414
                     /region_name="Peptidase_S41_CPP_like"
                     /note="C-terminal processing peptidase-like; serine
                     protease family S41; cd07561"
                     /db_xref="CDD:143477"
     Region          <87..149
                     /region_name="degP_htrA_DO"
                     /note="periplasmic serine protease, Do/DeqQ family;
                     TIGR02037"
                     /db_xref="CDD:273938"
     Region          <126..185
                     /region_name="cpPDZ_Deg_HtrA-like"
                     /note="permuted PDZ domain of Deg/high-temperature
                     requirement factor A (HtrA) family of housekeeping serine
                     proteases and related domains; cl49614"
                     /db_xref="CDD:483954"
     Site            order(331,356)
                     /site_type="active"
                     /note="Catalytic dyad [active]"
                     /db_xref="CDD:143477"
ORIGIN      
        1 mkiklflail ltsaavisck eknvdpatet etnqwiyenm kywyywnddm ttkpdytkdp
       61 asffesllyk ydatlrpdgd rfswiqesae eleaslggqs kasgmeyklt ylptgtqnvi
      121 gvvlyvlpds paakagfkrg difnsindqk ltgsnyskll nsqekltytl atlsadgvlt
      181 dgttkrevtp vvlqedpvff dtlynigahr igyvvyhqfi pepyqadnkq ydkkldaift
      241 kfkdanvnal ivdlrynpgg yvssatnfas liakatasdi fyykeyntev tetnmkkfge
      301 tyfydkfask sqnignqlnd vvflvssrsa sasellingl kpymnvtlvg gktvgknvgs
      361 vtltdskkkv kwglqpivsk slnkdkksdy svgftpdiaa segnllypyg npkdpllgea
      421 lfkitgnriv rqknartvqe eedqeiisti srkaggsnmf ydk
//
LOCUS       WP_235178309             530 aa            linear   BCT 02-MAR-2025
DEFINITION  M28 family peptidase [Dyadobacter chenhuakuii].
ACCESSION   WP_235178309
VERSION     WP_235178309.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016289.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04389.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..530
                     /product="M28 family peptidase"
                     /calculated_mol_wt=58508
     Region          130..256
                     /region_name="PA"
                     /note="Protease-associated (PA) domain. The PA domain is
                     an insert domain in a diverse fraction of proteases. The
                     significance of the PA domain to many of the proteins in
                     which it is inserted is undetermined. It may be a
                     protein-protein interaction domain. At...; cl28883"
                     /db_xref="CDD:333703"
     Site            216..218
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:238300"
     Region          286..524
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mtknllagml lsistltfaq ddaakyaesi tpddlkkhlv iiasdslegr dtgspgqkka
       61 aeyvssyykq ygltpaataa dgsksylqky nlhkrswgev yvkagskkye fnkefylngi
      121 lnvpeetsse vilvgygidd paytdynnld ikgkavvvfe gepksadgky lvsgtgektk
      181 wsgpvswqak arvaldrgat yvfivtdktg ddldkeirqr avmarrfsap tlkpvveapn
      241 slaafavpas iaaqilntst skllkekasi dksgkplskq msgnvavkae rvsetieten
      301 vaafmegsdk kdevllisah ldhigisdng einngadddg sgtvsllela eafskakaeg
      361 kgprrsilfl nvtgeekglf gseyysenpl fplkntiadl nidmigrvdk ahendhkyvy
      421 ligsdklssk lhaiseeank kyinynldyt fndpkdpnrf yyrsdhynfa kmgvpvifyf
      481 tgvhedyhkp gddvekilfd kqapivklvf htawelvnre erievdsnke
//
LOCUS       WP_235178374             527 aa            linear   BCT 02-MAR-2025
DEFINITION  SusD/RagB family nutrient-binding outer membrane lipoprotein
            [Dyadobacter chenhuakuii].
ACCESSION   WP_235178374
VERSION     WP_235178374.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 527)
  AUTHORS   Koropatkin,N., Martens,E.C., Gordon,J.I. and Smith,T.J.
  TITLE     Structure of a SusD homologue, BT1043, involved in mucin O-glycan
            utilization in a prominent human gut symbiont
  JOURNAL   Biochemistry 48 (7), 1532-1542 (2009)
   PUBMED   19191477
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024181.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12771.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..527
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /calculated_mol_wt=57786
     Region          32..499
                     /region_name="SusD-like_2"
                     /note="Starch-binding associating with outer membrane;
                     pfam12771"
                     /db_xref="CDD:463695"
ORIGIN      
        1 mknlkkyiky glavalvtgc dtkqlhdlni npqalnevnl nfiftsaelg iasngttgdn
       61 ryidwrtnig mfsyaiqhla nsgggiapgd kytvnaetna apfeftyndq lkniaeilkq
      121 sgpggfaegk ykntreasri lrafsfarlt dlygnipyse ankgiegiff pkydtqdviy
      181 adllkeldea taalstsnpd egfkaadfiy ngdiarwkkw gyslmlrlam risnvdaaka
      241 atyvtkaaag gvftsnadnv wvkmadgpse wvnqngisra fdagdggqpt ylsatlvnfl
      301 kgantavatd ddprlmiisg gigsgtvitd pvkqkgmpng ydlamlekle nkkpidvstt
      361 ysrinskmlq dsdpyqimny gevefllaea ierkigtgia gtakshyeag vkasmqmytp
      421 fdasltvsda aaakylttyp ygvtkpalem igeqmwvnkf fnwweawsdw rrtgfpkltp
      481 tnypgnvtgg tipvrlrypt nevagnpnyq tgatlpddft tkvwwdk
//
LOCUS       WP_235178006            1009 aa            linear   BCT 02-MAR-2025
DEFINITION  PA14 domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235178006
VERSION     WP_235178006.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 1009)
  AUTHORS   Rigden,D.J., Mello,L.V. and Galperin,M.Y.
  TITLE     The PA14 domain, a conserved all-beta domain in bacterial toxins,
            enzymes, adhesins and signaling molecules
  JOURNAL   Trends Biochem Sci 29 (7), 335-339 (2004)
   PUBMED   15236739
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07691.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..1009
                     /product="PA14 domain-containing protein"
                     /calculated_mol_wt=110294
     Region          267..352
                     /region_name="CytC552"
                     /note="Cytochrome c551/c552 [Energy production and
                     conversion]; COG4654"
                     /db_xref="CDD:443692"
     Region          409..526
                     /region_name="PA14"
                     /note="domain in bacterial beta-glucosidases other
                     glycosidases, glycosyltransferases, proteases, amidases,
                     yeast adhesins, and bacterial toxins; smart00758"
                     /db_xref="CDD:214807"
     Region          553..864
                     /region_name="YliI"
                     /note="Glucose/arabinose dehydrogenase, beta-propeller
                     fold [Carbohydrate transport and metabolism]; COG2133"
                     /db_xref="CDD:441736"
ORIGIN      
        1 mkfqkpsvgp rlaglsaail lavlgsayrg pattftpkpa tiagfsdvkr preawvlrsv
       61 ldarprilsi alhdnlwlay ntktaslyka wagkinfggp vytsshgpqp vsqgttymee
      121 pdenpwrlti dgkevtpeis ykghailnnq vtlkydldyq gkkisveekp effeagngka
      181 gfervftvan vpagselfln vhlnslssdt dykadgkflg vigqetvagk sffyingkli
      241 lnnngkttls vsltkkpaqp qtaqqeskae mvaglfaksd cntchnqevk tvgpaykaia
      301 eryenndnnk nalvtkvikg gagnwgqiam sphpdlkked aetmvsyile ldadkeraqa
      361 asklmprpay pivlksivpa kvatatekpg iavnvyqfss gigavpeind emlpvksgsi
      421 nalhldeqdf gdlkdnfaif asgyinikkt tnivfrlvcd dggklfidgk mvidngvnhp
      481 lqptdgeiil kpgkhpfkve yyqgafgkgl slqwrpygtk efvvvppsvf tykgadikrt
      541 gqtpvdvkke dipgdrsplv avhpsftlaq arpdnfqprv ggmdfladgr mvvstwdslg
      601 svyivdgrka tapndikvkr iayglaeplg lkvvddeiyi mqkqeltklv dlnndelide
      661 yqticngwkv sanfhefafg lvykdgyfyg tlatainpgg astkpqipdr gkvvkiskkd
      721 gsftfaasgl rtpngiglgv dneifiadnq gdwlpankii hlqegawygs rsvdfegtan
      781 ktetppvvwl tqdeignsps qpgrlnvgpy qnqmihgdvt hggikrvfae kvngayqgav
      841 frftqgleag vnrlvwspdg slyiggvgst gnwghagklg yglqkltfnn kvafemlavr
      901 aksdgveief teplkegvge taadyqirqw wfkptgdygg pkldeedlav ksvkvspdrk
      961 katlqltgmk skhmvyihln rktiisqsgn nlwsteawyn mneipknln
//
LOCUS       WP_235178492             585 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Dyadobacter chenhuakuii].
ACCESSION   WP_235178492
VERSION     WP_235178492.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 585)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..585
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=66415
     Region          <194..566
                     /region_name="TMAO_torS"
                     /note="TMAO reductase sytem sensor TorS; TIGR02956"
                     /db_xref="CDD:274362"
ORIGIN      
        1 mnkstytnef nelwkkesel ksrwgniifc vaylvgypat silyflrkdp afpevlaael
       61 vlsgviifll tlhftgrlsa qkasfytnla lvpvhayila evphasydra slnmtlglmf
      121 sffvlrwpvq ysiiltvcvm tifppalyyr hpgylynffs qgglffflgq mlfpfmmyfh
      181 esrnkheffy lfslaeqndl lekqkqiaed atlaksefls tmsheirtpl ngivgivhll
      241 eenksrseee melietlkfs sihlmavvnd ildfnkinsn hvklhpvtfd ieelfknlyn
      301 sflprarekg lelsadlspn lpqlrgdqvr lsqvinnlih naikftdsgf vkfsvkeler
      361 tndgiiklef avsdtgigis edqqsnvfei ftqvrslvkr qdggtglgla isrelvrlfg
      421 gelrlrsklg dgsvfsfqia lpysvtvedp aksekvptpa lnkgskvlvv ddnatnlifa
      481 tsllkrknip fdlasdgkqa vdkyfsdrfd lifmdlrmpv mdgfeatsmi rkrdpqipiv
      541 altasafede reralangft dylvkpflpp dfykivyahi gienq
//
LOCUS       WP_235178520             148 aa            linear   BCT 02-MAR-2025
DEFINITION  DMT family transporter [Dyadobacter chenhuakuii].
ACCESSION   WP_235178520
VERSION     WP_235178520.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 148)
  AUTHORS   Jack,D.L., Yang,N.M. and Saier,M.H. Jr.
  TITLE     The drug/metabolite transporter superfamily
  JOURNAL   Eur J Biochem 268 (13), 3620-3639 (2001)
   PUBMED   11432728
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10007109
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..148
                     /product="DMT family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=15961
     Region          1..147
                     /region_name="ydcZ"
                     /note="Uncharacterized membrane protein YdcZ, DUF606
                     family [Function unknown]; COG3238"
                     /db_xref="CDD:442470"
ORIGIN      
        1 mhwiflflaf ligisnavqs gvnvqlresf nnpilaalts ffvgfivlli afacfnqnpi
       61 psisdirqvs wtrfmggvlg afyvltvifi vrnigpanmi clvvagqmia aiaidhyglq
      121 gfavhpitlp riagaillva gvylilkn
//
LOCUS       WP_235178606             671 aa            linear   BCT 02-MAR-2025
DEFINITION  fibronectin type III domain-containing protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235178606
VERSION     WP_235178606.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 671)
  AUTHORS   Little,E., Bork,P. and Doolittle,R.F.
  TITLE     Tracing the spread of fibronectin type III domains in bacterial
            glycohydrolases
  JOURNAL   J Mol Evol 39 (6), 631-643 (1994)
   PUBMED   7528812
REFERENCE   2  (residues 1 to 671)
  AUTHORS   Bazan,J.F.
  TITLE     Structural design and molecular evolution of a cytokine receptor
            superfamily
  JOURNAL   Proc Natl Acad Sci U S A 87 (18), 6934-6938 (1990)
   PUBMED   2169613
REFERENCE   3  (residues 1 to 671)
  AUTHORS   Kornblihtt,A.R., Umezawa,K., Vibe-Pedersen,K. and Baralle,F.E.
  TITLE     Primary structure of human fibronectin: differential splicing may
            generate at least 10 polypeptides from a single gene
  JOURNAL   EMBO J 4 (7), 1755-1759 (1985)
   PUBMED   2992939
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012271.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00041.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..671
                     /product="fibronectin type III domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=72831
     Region          72..>528
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          498..585
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(498,554,575)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(576..577,579..580)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          607..669
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mknrtfrhti plfvlcignv llfsktslaq ramlranvvs yqqvdlswdr lpssvevfvv
       61 erkedgfgqr ftaisgnlsg ttfsyqdktv qenrtyiyrv tascdkscgg elnevrvttp
      121 lappanpsnl eafyisgrgm aitwvgnnsd gttfllerse ngggfnlltr vpyarslsyn
      181 dgtttagnsy cyrvkavsag gesgysnesc vsralpkpaa psglsatavs ssqidltwsd
      241 nadnetgfel erssdgnnfs kladlpanat sysntslptl tkfwyrilak naigssgfsn
      301 vaeattfdvp pgaptsltak tisssqinls wkdqatnear felerstdgt sfskiadiea
      361 nkttyentgl qpatkywyrv rsvngsgpsg fsniadattl dvapnapgrl satavshdqi
      421 nlewedvsgn etgfqierst ngttftkiad laanvksyqn kdlssetkyy yriravnaig
      481 psaysnvada ttrkapipdk pknltatpvd ydlvqlkwat lssnattvii ersrkpdadf
      541 kqigsqaant tqfpdreild vydyyyrika vnsagaspys dvakvaanqi itgtepqaqa
      601 nlifiydkil hitldrpstg qmtlyntrgm avksaalsqt mtldlsqlpa giyiavlnge
      661 ktlvkqkvll y
//
LOCUS       WP_235178657             438 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter associated domain-containing protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235178657
VERSION     WP_235178657.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015436.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03471.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..438
                     /product="transporter associated domain-containing
                     protein"
                     /calculated_mol_wt=49832
     Region          <146..435
                     /region_name="GldE"
                     /note="gliding motility-associated protein GldE;
                     TIGR03520"
                     /db_xref="CDD:274626"
ORIGIN      
        1 mketadsddp lartrtgitv pqrctqtlfa gviiptdfla pydlilvifl flvslflsgv
       61 raayaasgal enpwerksdt estlpnriqq lalsliqrgi tmlalllaar iawihiqddp
      121 nnvykwisig cialwiwlda mvrynaarra lefipkisgv tnflikicqp laqpimklgy
      181 sfgvltpega eitterleak aeseeetdll rglanfrqtn skkamqarlh itafdieldf
      241 helmdkinks gysrvpvyrd dldhiegiln vkdllphihl dehfnwqkll rpvyfipesk
      301 hlddlmkefq nrrvhmaivv deyggtsgli tlediieeif gdindeyded devnytqvdd
      361 ntyvfegkvs isdlcrllnl etdyfdevrg nneslaglll elfsrlprtg emathrevtf
      421 kvqsadkkri kkvrvlvg
//
LOCUS       WP_235178667              78 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2281 domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235178667
VERSION     WP_235178667.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021558.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10047.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..78
                     /product="DUF2281 domain-containing protein"
                     /calculated_mol_wt=9478
     Region          9..63
                     /region_name="DUF2281"
                     /note="Protein of unknown function (DUF2281); cl02355"
                     /db_xref="CDD:470547"
ORIGIN      
        1 mtkielqsqi qrkaqelpld llqevydyme filekrkrkp yskiedlenw wqnisnfsgd
       61 fmekriqppl dknenlfe
//
LOCUS       WP_235178675             450 aa            linear   BCT 02-MAR-2025
DEFINITION  neutral/alkaline non-lysosomal ceramidase N-terminal
            domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235178675
VERSION     WP_235178675.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 450)
  AUTHORS   Inoue,T., Okino,N., Kakuta,Y., Hijikata,A., Okano,H., Goda,H.M.,
            Tani,M., Sueyoshi,N., Kambayashi,K., Matsumura,H., Kai,Y. and
            Ito,M.
  TITLE     Mechanistic insights into the hydrolysis and synthesis of ceramide
            by neutral ceramidase
  JOURNAL   J Biol Chem 284 (14), 9566-9577 (2009)
   PUBMED   19088069
REFERENCE   2  (residues 1 to 450)
  AUTHORS   El Bawab,S., Roddy,P., Qian,T., Bielawska,A., Lemasters,J.J. and
            Hannun,Y.A.
  TITLE     Molecular cloning and characterization of a human mitochondrial
            ceramidase
  JOURNAL   J Biol Chem 275 (28), 21508-21513 (2000)
   PUBMED   10781606
REFERENCE   3  (residues 1 to 450)
  AUTHORS   Tani,M., Okino,N., Mori,K., Tanigawa,T., Izu,H. and Ito,M.
  TITLE     Molecular cloning of the full-length cDNA encoding mouse neutral
            ceramidase. A novel but highly conserved gene family of
            neutral/alkaline ceramidases
  JOURNAL   J Biol Chem 275 (15), 11229-11234 (2000)
   PUBMED   10753931
REFERENCE   4  (residues 1 to 450)
  AUTHORS   Okino,N., Ichinose,S., Omori,A., Imayama,S., Nakamura,T. and Ito,M.
  TITLE     Molecular cloning, sequencing, and expression of the gene encoding
            alkaline ceramidase from Pseudomonas aeruginosa. Cloning of a
            ceramidase homologue from Mycobacterium tuberculosis
  JOURNAL   J Biol Chem 274 (51), 36616-36622 (1999)
   PUBMED   10593963
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016612.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04734.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..450
                     /product="neutral/alkaline non-lysosomal ceramidase
                     N-terminal domain-containing protein"
                     /calculated_mol_wt=49245
     Region          70..>258
                     /region_name="Ceramidase_alk"
                     /note="Neutral/alkaline non-lysosomal ceramidase,
                     N-terminal; cl38166"
                     /db_xref="CDD:476609"
ORIGIN      
        1 mrflriflri igvivlllil tiatmittmd dtpykempyy gqwkkqitnv kkdtasasgq
       61 lragwakvni tppsptptag ygkrkgklyt avhdsvyvra mvidnggtqa aiiaadlliv
      121 pptviklvqa rltekeipfn qvffgathsh nsvggwgtgi sslffsgeyn patverlada
      181 ifqaivqaka klepvsltym esidkvdirn rlvgeegevd peirsaafvt nsgkkailss
      241 yaahstilns gnivlsrdyp gilvdslekg rydfamymag avgsmgpiek gsddfdelkn
      301 qaygvqkall snsaikekss gamlqaitlp lplrdpsprl tmsinlrswv fkkafgdypv
      361 fvkalrigni lmvgmpcdfs gelvaglday aktkglnlmv tsfnggyigy ithdkhfdkd
      421 lyetktmswy gpyngaylqe vikdiidkls
//
LOCUS       WP_235178678             317 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235178678
VERSION     WP_235178678.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 317)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..317
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=35585
     Region          6..305
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(10,12..13,15,36..38,73..75,114..116,140,144,
                     167..170)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(92,116,140,144)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mksecilvig angqigsvlv eylreiygve kvvasdirlp gfktglfekl datdgnalaa
       61 lvkkykvtqi yhlaailsak geqeplktwh inmqtyfnvl evarennvak vfypssiavf
      121 gdnvdtkaeq wsyldpatvy giskaagenw snyyfqrygm dirslrypgi igyqsmpggg
      181 ttdyavdiyh kavqgeafec fleakttlpm iyisdamdat vrlmeapkdk itvrtsynla
      241 gisfspeeva asigkiipdf kvsykpdfrq kiaeswpaqi ddsqarkdwg wrpaynldkm
      301 teemifelrk kyqsvks
//
LOCUS       WP_235178703             868 aa            linear   BCT 02-MAR-2025
DEFINITION  family 20 glycosylhydrolase [Dyadobacter chenhuakuii].
ACCESSION   WP_235178703
VERSION     WP_235178703.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 868)
  AUTHORS   Tews,I., Perrakis,A., Oppenheim,A., Dauter,Z., Wilson,K.S. and
            Vorgias,C.E.
  TITLE     Bacterial chitobiase structure provides insight into catalytic
            mechanism and the basis of Tay-Sachs disease
  JOURNAL   Nat Struct Biol 3 (7), 638-648 (1996)
   PUBMED   8673609
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012931.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00728.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..868
                     /product="family 20 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=97182
     Region          32..182
                     /region_name="CHB_HEX"
                     /note="Putative carbohydrate binding domain; cl03918"
                     /db_xref="CDD:446232"
     Region          195..853
                     /region_name="Chb"
                     /note="N-acetyl-beta-hexosaminidase [Carbohydrate
                     transport and metabolism]; COG3525"
                     /db_xref="CDD:442747"
ORIGIN      
        1 mkriflyqlv afcflilagc srsgdvtkeq aqkigiswkl itnfiepahs fdakftlrng
       61 sdftldgtnw alffnmsprp iqrnktpqpa iiehlngdwy kmvpgkdfkl apgdsiivny
      121 tgtegviket dapmglyfvf ydkegkekei vqvadfkvep fvakeqilrg kddlvplpta
      181 eqrykdnlkf tklgaeqllk iipspvkmsa gtetftldsk anvfyqkgle keakyliekl
      241 ktvtgtdfpi reglptttta dapsivlntg tvsvngiake ayklgvnasg vnitgsdaag
      301 vfygiqsllq lvptesyqkp apsillghiq vedaprfhfr smhldvgrnf qtkesikrvl
      361 dllasykvnh flfyttedeg wrveidglpe ltdvgahrah msgigapalh psygsgpvan
      421 degkygsgyy tradfieilk yandrhikvi pevnfpghal aaiksmeary erlmkegkek
      481 eaneyrlidp edksvylsaq ayknntvsva restyhffek vvdefakmyk eagltmdtfh
      541 tggdevaega wtkspmaikl kaenpeikef rdlqtyffrk llprlekrnl kvhgweeval
      601 tktnagiyna npefvghpvv pyvwnnvydv dlgnrlanag yqvvlcnvtn fyfdmsynnd
      661 pkepglywgg fvdtrdnwaf apfnmfrtte qtalgkpmke efvgkqqlkp earkniigie
      721 aqlwcetvkg rdmmeysilp klmgfaesaw aaerkwenva ddaarkkmid egwnvfansi
      781 aqrhmprmsf vnggynyrlp mpgavveggm lkanvelpgl airyttdgse ptakspvyea
      841 pvkaagtikl ksfdmagras rtsvvaaq
//
LOCUS       WP_235178702             415 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Dyadobacter chenhuakuii].
ACCESSION   WP_235178702
VERSION     WP_235178702.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..415
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45047
     Region          19..399
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(19,22..23,26,58,108..109,111..113,116,136,139..140,
                     143,235,238..239,242..244,247,276,280,328..329,333,337,
                     352,355..356,359..360,363)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mqrnifivil illiffvisf ltnilgpiip divksfrlsi glagflpfaf fvaygvmsip
       61 aglmvekyge kpvlllaffl aflgallfai ipsfaialgs lfligigmam lqvvinpllr
      121 vaggeekfaf fsvlaqlffg gasflspmly sylvlnvhsg nsgflidtln nlvpenlkwv
      181 slywvfavia llmvvvislv kfpkvdlled ermdvghsfn elvanksvwl fflgifayvg
      241 teqgianwis qflqtyhnvd patngaavis yfwglltigc flglillkif dsrkvlvfft
      301 sgailslafa lfgskavavn afpitgffas vmysvifsla lnsvprhhgt fsgilcagia
      361 ggavvplivg glgelfglqm amlflfvpla yifsigiwak plvnndtiss ikdif
//
LOCUS       WP_235178725            1282 aa            linear   BCT 02-MAR-2025
DEFINITION  hydantoinase B/oxoprolinase family protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235178725
VERSION     WP_235178725.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 1282)
  AUTHORS   Watabe,K., Ishikawa,T., Mukohara,Y. and Nakamura,H.
  TITLE     Cloning and sequencing of the genes involved in the conversion of
            5-substituted hydantoins to the corresponding L-amino acids from
            the native plasmid of Pseudomonas sp. strain NS671
  JOURNAL   J Bacteriol 174 (3), 962-969 (1992)
   PUBMED   1732229
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014585.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02538.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1282
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..1282
                     /product="hydantoinase B/oxoprolinase family protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=138588
     Region          136..1282
                     /region_name="PLN02666"
                     /note="5-oxoprolinase"
                     /db_xref="CDD:215358"
ORIGIN      
        1 mgssfwkiwv dtggtftdcl avdlagnktr lkvlssgcvr grivgkvadn tfqyaaswaf
       61 dagllegytl rllengltsk visfdssnqt ftlendlpfa qntdfeifsg eeapvlaarl
      121 ltqtkltetl pplemrlgtt rgtnallerk gaktllvvtk gfkdllyign qqrpslfqld
      181 ipeprllyfe vleieerlda sgnvirglna adlttlasaa nadsiaisll hsyqnnahel
      241 ltekaflgng akyisvsskl fpfshylrrt qtavvnayld pvldqyltni knslggnplg
      301 gtplggtplg dnslgdnpls pgnlkvmtst gslsevsgfr akdsllsgpa ggmvaaanag
      361 krlgfsklit fdmggtstdt alidgrpelk yiteidgief hnptlaietv aagggsvcwf
      421 dgfslqvgpe sagaspgpac ygaggpltit dvnlllgkld askfgipvra daalaalrdl
      481 qksiesqtgn vlsfselltg lerianekma dairkisvek ginpgdfali tfggagglhs
      541 cqlaelldiq tviipydagl fsavgmgeal istivskqil ltwkesedki ehwkneflqe
      601 gaaklqnqgv nafetafcyv ylrfagqent ievsyegaet lnvfeklyta qfgyfpanlt
      661 ieleslklmi qertvpiale tiikegnsad airsvtplfe tksfetekpd ahhaanlfew
      721 dklaagdqlt gpaillnnts tayipknwnl iiqhskdaia fktsetnlia ekqseevalq
      781 lftnrfksia demgvqlqrt afsvnvkerl dfscalldqd gellvnaqhi pvhlgsmgic
      841 grlvkdaiei gpgdviitnh pkyggshlpd itlisgiftd vktcigyvin rahhaevggk
      901 tpgsmppdat claeegvvil pqyliknnvf qwetiralft qgpyptrhfl sneadiiaal
      961 salrkgseqm lrlvdlhgle tvrkymrllk enavaqlqta liplqdktfk atellddghr
     1021 iqvkvsitae kqvfdftgts dvhpnnlnan isilysaily vlrllvnkei plndglmkhv
     1081 diilpdnsfl hpnfsddpfq cpavvggnte vsqrlvdtll kafglaacsq gtmnnflfgd
     1141 kqfgyyetig ggtgagpgfh grsavhqhmt ntritdpeql erkypvrlle fgirknsggk
     1201 gtfnggngiv rkfeflkplq ltllgqhrky apyglngged gkcgvhtlis ngettslpgi
     1261 csleaqkgdi lmietpgggg fg
//
LOCUS       WP_235178786             188 aa            linear   BCT 02-MAR-2025
DEFINITION  DapH/DapD/GlmU-related protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235178786
VERSION     WP_235178786.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025953.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14602.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..188
                     /product="DapH/DapD/GlmU-related protein"
                     /calculated_mol_wt=20150
     Region          20..185
                     /region_name="LbetaH"
                     /note="Left-handed parallel beta-Helix (LbetaH or LbH)
                     domain: The alignment contains 5 turns, each containing
                     three imperfect tandem repeats of a hexapeptide repeat
                     motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing
                     hexapeptide repeats are often enzymes...; cl00160"
                     /db_xref="CDD:469633"
     Site            order(88,90,94,96,108,114,116,142,147..148,150,160,164,
                     166,168)
                     /site_type="other"
                     /note="putative trimer interface [polypeptide binding]"
                     /db_xref="CDD:100047"
     Site            order(142,144..145,150,162,168)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:100047"
ORIGIN      
        1 mstekdifar lqagellrkd dpeygkfaev vartirlcvq mnatateldq vrtqlseiig
       61 teidesttif ppfytnfgks vklgknvfin hacsfldigg itiednvqig prvnltsenh
      121 pldpddrttl ipkpviikrn awigagatil pgvtigenav vaagavvsrd vpantvvagi
      181 pakvvkqi
//
LOCUS       WP_235178840             349 aa            linear   BCT 02-MAR-2025
DEFINITION  aminopeptidase [Dyadobacter chenhuakuii].
ACCESSION   WP_235178840
VERSION     WP_235178840.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 349)
  AUTHORS   Lenart,A., Dudkiewicz,M., Grynberg,M. and Pawlowski,K.
  TITLE     CLCAs - a family of metalloproteases of intriguing phylogenetic
            distribution and with cases of substituted catalytic sites
  JOURNAL   PLoS One 8 (5), e62272 (2013)
   PUBMED   23671590
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021535.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10023.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..349
                     /product="aminopeptidase"
                     /EC_number="3.4.11.-"
                     /calculated_mol_wt=39881
     Region          25..329
                     /region_name="Aminopep"
                     /note="Putative aminopeptidase; cl17720"
                     /db_xref="CDD:473090"
ORIGIN      
        1 mfkkifiaii vlcllagiyy rdllsygwmq asgqvkilmn veevtdvlad psfpdslkar
       61 irlieeikkf gvdslgltps knyttfynqh gkpliwlita sekykiepyk whfpiigsfp
      121 ykgffdstra vseerelmkq gldtdigdvs awstlgylkd pilssmlnrr vgslanlilh
      181 elthgtlfvk nnlelnenla sfigdqgair flkfkyglds pelrtyeysk kyndaysrhm
      241 lrgigrldsl yktfgtnpva sahydslkta lianifedad tllsgkrtlt nknrgagrwp
      301 dgklpnnayf isyqtykskq difkfefeqk fggnikkylt ylkekypsl
//
LOCUS       WP_235178842             396 aa            linear   BCT 02-MAR-2025
DEFINITION  methylmalonyl-CoA mutase family protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235178842
VERSION     WP_235178842.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 396)
  AUTHORS   Mancia,F., Keep,N.H., Nakagawa,A., Leadlay,P.F., McSweeney,S.,
            Rasmussen,B., Bosecke,P., Diat,O. and Evans,P.R.
  TITLE     How coenzyme B12 radicals are generated: the crystal structure of
            methylmalonyl-coenzyme A mutase at 2 A resolution
  JOURNAL   Structure 4 (3), 339-350 (1996)
   PUBMED   8805541
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013781.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01642.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..396
                     /product="methylmalonyl-CoA mutase family protein"
                     /GO_function="GO:0016866 - intramolecular transferase
                     activity [Evidence IEA]"
                     /GO_function="GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /calculated_mol_wt=43532
     Region          9..381
                     /region_name="MM_CoA_mutase"
                     /note="Coenzyme B12-dependent-methylmalonyl coenzyme A
                     (CoA) mutase (MCM)-like family; contains proteins similar
                     to MCM, and the large subunit of Streptomyces coenzyme
                     B12-dependent isobutyryl-CoA mutase (ICM). MCM catalyzes
                     the isomerization of...; cl00817"
                     /db_xref="CDD:469938"
ORIGIN      
        1 mavldfsefs psdknaweqr adkelkgrlk tlsdwtigad lhmqpyvtrs eiapekmasm
       61 qacqkktpgw qnlpmvkfse pratnaamkh alengadaim ldlrnasiah cefpkllhgi
      121 rlsdtaiyfq tqenaadvfk eisknagyyl kggiafdpva hqmrtgksig nsidaivsvl
      181 nqsrnmrefr aymveghffh nngatpvqel amlisatvny vdlltdkgis pltafnralf
      241 tisigtnfls eiaklrafrf llrkisnayq lpaelctpfi qaqtstfnda asepytnmir
      301 saseamsavm ggcnaltvrp ydesankqsd fsariarnvs silahesala hvadpaagsy
      361 mlekmsldma arawelflem eesegskasv ltaskp
//
LOCUS       WP_235178870             957 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235178870
VERSION     WP_235178870.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 957)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..957
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=104936
     Region          27..120
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
     Region          131..>270
                     /region_name="BtuB"
                     /note="Outer membrane cobalamin receptor protein BtuB
                     [Coenzyme transport and metabolism]; COG4206"
                     /db_xref="CDD:443355"
     Region          452..922
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mkkfasllsl lilfslsafa qeptgritgm vkdsvtnepv vgayvavsrn lpdakpeyvt
       61 tdidgkfsfs glakqavylv kvsylsfkda srtvtvqddt qdvgtfqlse avanlkeikv
      121 vgqvtavqqk gdttqfnaaa yktnpdatse dliqkmpgit vangtvtahg etvnrvlvdg
      181 kpffgedaal tlkslpaeiv dkievfdkls dqaqftgfdd gngqktiniv tkadrkmgqf
      241 gkvfagygld nryqaggnvs ffkgdqrisv iglsnninmq nfssqdligv sggggggrgg
      301 sgggsagnfl vgnqsgitgt nsfglnyank fgkkvdvtgs yffnrtgnsn vqsmqqrfil
      361 pgdtdstdqi ynensrtnnt nanhrlnfri eyninknnsl ivtprlsfqd nnsastkagl
      421 ntlnglrins ldnsqrnatn aynfnndvlf rhsfekkgrt lsvnlntqln drnglgnlys
      481 ktmffdslgl aargdtldqe sytysngltl ggnliytepi gknsqlqfny gltvsnsdsk
      541 ketynmsfde ntysdldsll sntfdnryvt nragigyryr knswsanlgl dfqntglysq
      601 qlapvnakvd qsftnllpnf mlsyrsktgt qfrtffrsst nqpsisqlqn vidnsnplal
      661 tagnpdlkqe yrnsfnirys lagaerpynl namvfvtqtn naivnstlia qepteivdgi
      721 ilergakftk pvnvdgswna rtflaygkpi aplklnvnlt tgfnyvrspg linnisnysn
      781 tyavsqglvv ssnvsenldf tvsysgnynm vrntiqpnln nnyytqgitg rvnwifgkgf
      841 vvqsdvsnqs yrglgegynr nftlwnasig kkflknnage lkltvfdilk qnnsitrnvt
      901 etyvqdvtnr vltqyamltf sytlrnfgka papqsnrrrd fesgdmpggg rggrggf
//
LOCUS       WP_235178931             326 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2279 domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235178931
VERSION     WP_235178931.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021554.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10043.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..326
                     /product="DUF2279 domain-containing protein"
                     /calculated_mol_wt=37020
     Region          98..176
                     /region_name="DUF2279"
                     /note="Predicted periplasmic lipoprotein (DUF2279);
                     cl11574"
                     /db_xref="CDD:448313"
ORIGIN      
        1 madikrrfls cflllilaic lshsvsaqtd slqkgnwqtd ssridtlktv akdsvpadvr
       61 pnyrmlrgif aaqsalylgt iyglskswyk npltkftfkd dtgewlqmdk mghvytsyqi
      121 arhtaelyrk tgiskrqmlv ygaisgiifq tpieildgfs pdygfspgdm vgniagsviy
      181 lgqialwdev riqpkfsfhy tslarvrpel lgstrseswl kdyngqtywf sgspgtffkn
      241 sgwpawlcls igygihdmvs aekeksierg yrpyrqyyls ldinltkikt kskfvrtigf
      301 fansikipap alqfskkgid fkpfyf
//
LOCUS       WP_235179020             455 aa            linear   BCT 02-MAR-2025
DEFINITION  OmpA family protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235179020
VERSION     WP_235179020.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012894.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00691.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..455
                     /product="OmpA family protein"
                     /calculated_mol_wt=51479
     Region          67..210
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          194..449
                     /region_name="OmpA"
                     /note="Outer membrane protein OmpA and related
                     peptidoglycan-associated (lipo)proteins [Cell
                     wall/membrane/envelope biogenesis]; COG2885"
                     /db_xref="CDD:442131"
     Region          347..449
                     /region_name="OmpA_C-like"
                     /note="Peptidoglycan binding domains similar to the
                     C-terminal domain of outer-membrane protein OmpA; cd07185"
                     /db_xref="CDD:143586"
     Site            order(352..353,386..387,390,394..395,398,440,444)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:143586"
ORIGIN      
        1 mlvilltgly fpsfsqsqwt ydfnngltpi enagpslkvl gqpgkyvkek ipgsddlsrt
       61 iyqfeknsgl qfnnaeakgf lsksftvevy fkmdeldswk rvldfknrks dygsyiydgk
      121 lnfydfaige kapvranqyv hyvysrdfet kiikmyingq sklefkdpgt egmldndqvl
      181 nffqddlian hessagsivl irvydrvmtp vfvrrsyqti sraskaavae keeekqpeek
      241 pavkepakrn tnlavvtgrv ydgknlkpvn dadvtvrksn sdslvastkt vngiynfelr
      301 pyetyrisaq aegfqsksvs vkvsnrfeev kslislsest ydtplstlyf tqstdvledd
      361 alrgldslvs yfqkrdnlri vlkghtdntg dfaknlelsn mrvatvksyl lgkgidenri
      421 sgsgygsaqp srmnqtealk rsnrrveiwa epikr
//
LOCUS       WP_235179062             122 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphatase PAP2 family protein [Bacillus cihuensis].
ACCESSION   WP_235179062
VERSION     WP_235179062.1
KEYWORDS    RefSeq.
SOURCE      Bacillus cihuensis
  ORGANISM  Bacillus cihuensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 122)
  AUTHORS   Neuwald,A.F.
  TITLE     An unexpected structural relationship between integral membrane
            phosphatases and soluble haloperoxidases
  JOURNAL   Protein Sci 6 (8), 1764-1767 (1997)
   PUBMED   9260289
REFERENCE   2  (residues 1 to 122)
  AUTHORS   Stukey,J. and Carman,G.M.
  TITLE     Identification of a novel phosphatase sequence motif
  JOURNAL   Protein Sci 6 (2), 469-472 (1997)
   PUBMED   9041652
REFERENCE   3  (residues 1 to 122)
  AUTHORS   Messerschmidt,A. and Wever,R.
  TITLE     X-ray structure of a vanadium-containing enzyme: chloroperoxidase
            from the fungus Curvularia inaequalis
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 392-396 (1996)
   PUBMED   8552646
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013718.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01569.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Bacillus cihuensis"
                     /db_xref="taxon:1208599"
     Protein         1..122
                     /product="phosphatase PAP2 family protein"
                     /calculated_mol_wt=13799
     Region          <26..104
                     /region_name="PAP2_like"
                     /note="PAP2_like proteins, a super-family of histidine
                     phosphatases and vanadium haloperoxidases, includes type 2
                     phosphatidic acid phosphatase or lipid phosphate
                     phosphatase (LPP), Glucose-6-phosphatase,
                     Phosphatidylglycerophosphatase B and bacterial acid...;
                     cl00474"
                     /db_xref="CDD:469784"
ORIGIN      
        1 myeesirgif helsplnhsf tdqlfysfps eqalmalviy gfvvfilvht trkfwiytyv
       61 piaglvilfl tatsrlflev qlpsdvaagy vfggvwlgin illlvilclm rsvdnhsnrq
      121 lv
//
LOCUS       WP_235179087              87 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Bacillus cihuensis].
ACCESSION   WP_235179087
VERSION     WP_235179087.1
KEYWORDS    RefSeq.
SOURCE      Bacillus cihuensis
  ORGANISM  Bacillus cihuensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 87)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 87)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Bacillus cihuensis"
                     /db_xref="taxon:1208599"
     Protein         1..87
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=10061
     Region          <2..78
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(33,36,62,71)
                     /site_type="active"
                     /db_xref="CDD:271175"
ORIGIN      
        1 mknnkqfnpc vlhkifkeil eraglpahrf slhhlrhtia tlllqeikdk vdvrtlqqlf
       61 gheslastsk ythidfeqnk sylvvii
//
LOCUS       WP_235178754             851 aa            linear   BCT 02-MAR-2025
DEFINITION  PspC domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235178754
VERSION     WP_235178754.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 851)
  AUTHORS   Brissette,J.L., Weiner,L., Ripmaster,T.L. and Model,P.
  TITLE     Characterization and sequence of the Escherichia coli
            stress-induced psp operon
  JOURNAL   J Mol Biol 220 (1), 35-48 (1991)
   PUBMED   1712397
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015957.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04024.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..851
                     /product="PspC domain-containing protein"
                     /calculated_mol_wt=92806
     Region          140..221
                     /region_name="PspC"
                     /note="Phage shock protein PspC (stress-responsive
                     transcriptional regulator) [Transcription, Signal
                     transduction mechanisms]; COG1983"
                     /db_xref="CDD:441586"
     Region          226..289
                     /region_name="PspC"
                     /note="Phage shock protein PspC (stress-responsive
                     transcriptional regulator) [Transcription, Signal
                     transduction mechanisms]; COG1983"
                     /db_xref="CDD:441586"
     Region          667..849
                     /region_name="DUF2807"
                     /note="Putative auto-transporter adhesin, head GIN domain;
                     pfam10988"
                     /db_xref="CDD:431583"
ORIGIN      
        1 mkktisinig giifhieedg yeklkgylss iqkyfssfad skeilsdieg riaerflnkq
       61 kaeakqvisl sdvdeliaam gtvadfeaie qaediladpl esaaskgyap reetyssass
      121 sssssysapk tepapfaapk klyrdlkrkl lggvaaglah yftidplwvr laflffvigl
      181 pagsgmmnln medefgpfsg fmvlvyiamw vafpgsttle edtkikkfyr dpdrkvvggv
      241 aagvasyfgv dlgvvrflwv lsillfgtgv lvyiilwvia pvantltekm emqgepitls
      301 niesnikhgl nldektgeeh ivtkiflfpf raialvigal grmlkglgpi iriligaflv
      361 atavmgllgl iiaggvalgv tssaafdnlp lpflifqelp svlilsgflv saiplvtfll
      421 lgltlisnkr ivggsvwltl lglwivgiig atiggisyqr nfakrgevvq svsyvapsgt
      481 ltldydyind eenvdvdirl vgytatsdsi rldktlyarg rsredaekna sglaydidvk
      541 dsvfifkegp ilagrgpfrd qridlalhip fnkpfvmkrd fyfsmnrwdq kttdrydldn
      601 devdfntlkw emrqdsglic vnlpakflks dteennenag ysfdyednsd lelgergnys
      661 kqfpvgdfnk idiggaysii irqgneynvt adseepadvd dlkvyvengt lrvtrnkefs
      721 lfdsdkwkri glvitmpkie nlslsgankt lvtgftglgk lavdisgask seinveadql
      781 evsisgaska tlkgsarsvn ldasgackld avglniqtad vdasgaskve lgripsirrh
      841 tsgaskinvq e
//
LOCUS       WP_235179199             304 aa            linear   BCT 02-MAR-2025
DEFINITION  UbiA family prenyltransferase [Dyadobacter chenhuakuii].
ACCESSION   WP_235179199
VERSION     WP_235179199.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013226.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01040.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..304
                     /product="UbiA family prenyltransferase"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /calculated_mol_wt=34717
     Region          3..286
                     /region_name="PT_UbiA"
                     /note="UbiA family of prenyltransferases (PTases);
                     cl00337"
                     /db_xref="CDD:469727"
ORIGIN      
        1 mvrkivsfvf fanyfvglla valsletmfq lrlpfnavpy yilifcatvf yytiaysipp
       61 gtafssnprt ewyrthynft risqyvlfti ctgisgwfli rdftkllhlp lanwllllsi
      121 pgaailyygl lpkslisfnl rntgwlkafv igfvwagfvn vfpitmlrie qgivvhepif
      181 mfwlfvknwm fctvnaimfd mkdyeddani qlktfavrig lsntivyvlv pllligllsf
      241 lsfaffqrls tptlmlnllp fvcllgvafa lqkpksvlfy lividglllv kaicgitgsf
      301 ftyh
//
LOCUS       WP_235179091             109 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5661 family protein [Bacillus cihuensis].
ACCESSION   WP_235179091
VERSION     WP_235179091.1
KEYWORDS    RefSeq.
SOURCE      Bacillus cihuensis
  ORGANISM  Bacillus cihuensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039818.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18905.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Bacillus cihuensis"
                     /db_xref="taxon:1208599"
     Protein         1..109
                     /product="DUF5661 family protein"
                     /calculated_mol_wt=12528
     Region          30..102
                     /region_name="DUF5661"
                     /note="Protein of unknown function (DUF5661); pfam18905"
                     /db_xref="CDD:408675"
ORIGIN      
        1 mhyfhptkyp nriqtnnfni vktsfskeea aaialllgid fdkskfdlde fwmgvntele
       61 hgkqssqtnv tgddpimtgk ialahlnefp dyykrlkile eeakaywnk
//
LOCUS       WP_235179280             114 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Bacillus cihuensis].
ACCESSION   WP_235179280
VERSION     WP_235179280.1
KEYWORDS    RefSeq.
SOURCE      Bacillus cihuensis
  ORGANISM  Bacillus cihuensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 114)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 114)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Bacillus cihuensis"
                     /db_xref="taxon:1208599"
     Protein         1..114
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=13485
     Region          2..>86
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
ORIGIN      
        1 mdqdyviflq laytglrvge lcalkwrdid mndhtisvsn tyynptnnrk eyklltpkte
       61 tsirivdvdd nvinelkrhq glqktimmry ryiyhdqgff llvlmirlpv irsi
//
LOCUS       WP_235179300             178 aa            linear   BCT 02-MAR-2025
DEFINITION  biotin/lipoyl-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235179300
VERSION     WP_235179300.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012584.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00364.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..178
                     /product="biotin/lipoyl-containing protein"
                     /calculated_mol_wt=19133
     Region          <81..140
                     /region_name="Biotinyl_lipoyl_domains"
                     /note="Biotinyl_lipoyl_domains are present in
                     biotin-dependent carboxylases/decarboxylases, the
                     dihydrolipoyl acyltransferase component (E2) of 2-oxo acid
                     dehydrogenases, and the H-protein of the glycine cleavage
                     system (GCS). These domains transport CO2, acyl; cl11404"
                     /db_xref="CDD:448245"
     Site            100
                     /site_type="other"
                     /note="lipoyl-biotinyl attachment site [posttranslational
                     modification]"
                     /db_xref="CDD:133456"
     Region          112..177
                     /region_name="biotinyl_domain"
                     /note="The biotinyl-domain or biotin carboxyl carrier
                     protein (BCCP) domain is present in all biotin-dependent
                     enzymes, such as acetyl-CoA carboxylase, pyruvate
                     carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA
                     carboxylase, geranyl-CoA carboxylase; cd06850"
                     /db_xref="CDD:133459"
     Site            order(134,143..145,152)
                     /site_type="active"
                     /note="carboxyltransferase (CT) interaction site [active]"
                     /db_xref="CDD:133459"
     Site            144
                     /site_type="other"
                     /note="biotinylation site [posttranslational
                     modification]"
                     /db_xref="CDD:133459"
ORIGIN      
        1 mlkiavsdap atehgddast gdvfeinkeq nnlsiggetf dgdittlgnn hfhaiwknks
       61 ynievlecnv aektfhllin gqhihtkakd eldlllegmg lqntsiakin nvkapmpgli
      121 qsvvvaegdt iqkgdtllvl vamkmentik ssgngvvktl kvaageivek nqvllefq
//
LOCUS       WP_235179426             139 aa            linear   BCT 02-MAR-2025
DEFINITION  nitrilase-related carbon-nitrogen hydrolase [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235179426
VERSION     WP_235179426.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 139)
  AUTHORS   Pace,H.C. and Brenner,C.
  TITLE     The nitrilase superfamily: classification, structure and function
  JOURNAL   Genome Biol 2 (1), REVIEWS0001 (2001)
   PUBMED   11380987
REFERENCE   2  (residues 1 to 139)
  AUTHORS   Bork,P. and Koonin,E.V.
  TITLE     A new family of carbon-nitrogen hydrolases
  JOURNAL   Protein Sci 3 (8), 1344-1346 (1994)
   PUBMED   7987228
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012993.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00795.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..139
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /GO_process="GO:0008152 - metabolic process [Evidence
                     IEA]"
                     /calculated_mol_wt=15376
     Region          <12..132
                     /region_name="Nit2"
                     /note="Omega-amidase YafV/Nit2, hydrolyzes
                     alpha-ketoglutaramate [Energy production and conversion];
                     COG0388"
                     /db_xref="CDD:440157"
ORIGIN      
        1 mlvfipnqpr qvyskqylha deepyfipgr kpvlirwker tisfaicyev fvpehacnvi
       61 qngadiyias vaksakgvvr aykrlaqiag dfgitvlman svgyqdnfqs agfsaswskd
      121 gelagqlgde adklllfnl
//
LOCUS       WP_235179437             478 aa            linear   BCT 02-MAR-2025
DEFINITION  S41 family peptidase [Dyadobacter chenhuakuii].
ACCESSION   WP_235179437
VERSION     WP_235179437.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015531.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03572.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..478
                     /product="S41 family peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=52798
     Region          38..420
                     /region_name="Peptidase_S41_CPP_like"
                     /note="C-terminal processing peptidase-like; serine
                     protease family S41; cd07561"
                     /db_xref="CDD:143477"
     Region          114..192
                     /region_name="PDZ"
                     /note="Domain present in PSD-95, Dlg, and ZO-1/2;
                     smart00228"
                     /db_xref="CDD:214570"
     Site            order(334,359)
                     /site_type="active"
                     /note="Catalytic dyad [active]"
                     /db_xref="CDD:143477"
ORIGIN      
        1 mktfqkigfk lafltlacia gcrekdvntl gdllgdknsv newvyatmqd gyfwykempa
       61 kskldaraep dayfenlvfn rkthdrfsmi tpdfeatqqq fngvtkafgi hymlgfidsg
      121 ksniaaflsh vsngspaqra glkrgdiiik vngtqltdan yadllgaesi rvtmgkvnge
      181 viesvgqevt ltrgqitesp iafskiitkq nrkigylvyn qfvpgtdadk vkydnelrni
      241 fadfnkagiq elvldlrlng ggylssavtl gslivsnysa skvfykeqwn dkyikywqek
      301 ngpdaltykf akepsnignr lnrifvltsn gtasaselii nglkphmsvi tigdntagkn
      361 lfgsligdek krwkyglyvm lgqtvnangd sdygtvegik pthavddsnv pflpfgdene
      421 tllhaaltqm gittrnpahm agrlqvqrtv rqtlrdtpaa wnglmvrdtg eamplpid
//
LOCUS       WP_235179438             252 aa            linear   BCT 02-MAR-2025
DEFINITION  MotA/TolQ/ExbB proton channel family protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235179438
VERSION     WP_235179438.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 252)
  AUTHORS   Braun,T.F., Poulson,S., Gully,J.B., Empey,J.C., Van Way,S.,
            Putnam,A. and Blair,D.F.
  TITLE     Function of proline residues of MotA in torque generation by the
            flagellar motor of Escherichia coli
  JOURNAL   J Bacteriol 181 (11), 3542-3551 (1999)
   PUBMED   10348868
REFERENCE   2  (residues 1 to 252)
  AUTHORS   Higgs,P.I., Myers,P.S. and Postle,K.
  TITLE     Interactions in the TonB-dependent energy transduction complex:
            ExbB and ExbD form homomultimers
  JOURNAL   J Bacteriol 180 (22), 6031-6038 (1998)
   PUBMED   9811664
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013760.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01618.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..252
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /calculated_mol_wt=28438
ORIGIN      
        1 mnskrlyhls vslivavsiw falillssls lspginrflq afggsfggfv haiiytafif
       61 gvleivsyrk firkqnegfg lnvlpvedql llspdevari kmsvldlerh gfsfmltdfi
      121 kractqyrnn qsisetlqvl nvqidnskte legrleiarf linaiaslgf igtilhlags
      181 iglfhlakte egmplitqsl niafdttfia lflglilsyf yhryleeidt fysrmkahii
      241 dnlisriykq qs
//
LOCUS       WP_235179447             241 aa            linear   BCT 02-MAR-2025
DEFINITION  AraC family ligand binding domain-containing protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235179447
VERSION     WP_235179447.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 241)
  AUTHORS   Soisson,S.M., MacDougall-Shackleton,B., Schleif,R. and Wolberger,C.
  TITLE     Structural basis for ligand-regulated oligomerization of AraC
  JOURNAL   Science 276 (5311), 421-425 (1997)
   PUBMED   9103202
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02311.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..241
                     /product="AraC family ligand binding domain-containing
                     protein"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=27748
     Region          15..>68
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     Region          <192..239
                     /region_name="AraC"
                     /note="AraC-type DNA-binding domain and AraC-containing
                     proteins [Transcription]; COG2207"
                     /db_xref="CDD:441809"
ORIGIN      
        1 mevnkmenvv vqhnilyaqg hqktqssehy fpehalgiml sgesyyysse gtfvmkegti
       61 clmrrnelfk klkkagpngd ppalisifld qktlhqyate ndvakqaayk gkammeltgd
      121 tllkgffdsl vpyaqrpekl takiaelktl eaielllqsg dvyrqllfdf qqphkidlem
      181 ymnhnfiyni plptfakltg rslstfkrdf tkifetspek wlqqkrleqa hyliskramr
      241 p
//
LOCUS       WP_235179475             116 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4907 domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235179475
VERSION     WP_235179475.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027575.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16250.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..116
                     /product="DUF4907 domain-containing protein"
                     /calculated_mol_wt=12430
     Region          44..109
                     /region_name="DUF4907"
                     /note="Domain of unknown function (DUF4907); pfam16250"
                     /db_xref="CDD:435236"
ORIGIN      
        1 msskkklili isvlafaavt yiflykgdig adgkglrrls veafkvesgw gyrildngtp
       61 iieqrsipgi agnkgfqner salktgnlve rklqsgifpp svsaseldsl giqygq
//
LOCUS       WP_235179516             108 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA-directed RNA polymerase subunit alpha C-terminal
            domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235179516
VERSION     WP_235179516.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 108)
  AUTHORS   Murakami,K., Kimura,M., Owens,J.T., Meares,C.F. and Ishihama,A.
  TITLE     The two alpha subunits of Escherichia coli RNA polymerase are
            asymmetrically arranged and contact different halves of the DNA
            upstream element
  JOURNAL   Proc Natl Acad Sci U S A 94 (5), 1709-1714 (1997)
   PUBMED   9050843
REFERENCE   2  (residues 1 to 108)
  AUTHORS   Jeon,Y.H., Negishi,T., Shirakawa,M., Yamazaki,T., Fujita,N.,
            Ishihama,A. and Kyogoku,Y.
  TITLE     Solution structure of the activator contact domain of the RNA
            polymerase alpha subunit
  JOURNAL   Science 270 (5241), 1495-1497 (1995)
   PUBMED   7491496
REFERENCE   3  (residues 1 to 108)
  AUTHORS   Ebright,R.H. and Busby,S.
  TITLE     The Escherichia coli RNA polymerase alpha subunit: structure and
            function
  JOURNAL   Curr Opin Genet Dev 5 (2), 197-203 (1995)
   PUBMED   7613089
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015102.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03118.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..108
                     /product="DNA-directed RNA polymerase subunit alpha
                     C-terminal domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA]"
                     /GO_process="GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /calculated_mol_wt=12199
     Region          <86..107
                     /region_name="RpoA"
                     /note="DNA-directed RNA polymerase, alpha subunit/40 kD
                     subunit [Transcription]; COG0202"
                     /db_xref="CDD:439972"
ORIGIN      
        1 maknnieted ilkasyrvel firklekqiq taliyepsgs ikkdiqvlne fvknqkmlie
       61 darkslsgny dykgnyldte ivstplstrt slclksanik tvkdliea
//
LOCUS       WP_235179496             701 aa            linear   BCT 02-MAR-2025
DEFINITION  cbb3-type cytochrome c oxidase subunit I [Dyadobacter chenhuakuii].
ACCESSION   WP_235179496
VERSION     WP_235179496.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 701)
  AUTHORS   Gopalasingam,C.C., Johnson,R.M., Chiduza,G.N., Tosha,T.,
            Yamamoto,M., Shiro,Y., Antonyuk,S.V., Muench,S.P. and Hasnain,S.S.
  TITLE     Dimeric structures of quinol-dependent nitric oxide reductases
            (qNORs) revealed by cryo-electron microscopy
  JOURNAL   Sci Adv 5 (8), eaax1803 (2019)
   PUBMED   31489376
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 701)
  AUTHORS   Tsukihara,T., Aoyama,H., Yamashita,E., Tomizaki,T., Yamaguchi,H.,
            Shinzawa-Itoh,K., Nakashima,R., Yaono,R. and Yoshikawa,S.
  TITLE     The whole structure of the 13-subunit oxidized cytochrome c oxidase
            at 2.8 A
  JOURNAL   Science 272 (5265), 1136-1144 (1996)
   PUBMED   8638158
REFERENCE   3  (residues 1 to 701)
  AUTHORS   Castresana,J., Lubben,M., Saraste,M. and Higgins,D.G.
  TITLE     Evolution of cytochrome oxidase, an enzyme older than atmospheric
            oxygen
  JOURNAL   EMBO J 13 (11), 2516-2525 (1994)
   PUBMED   8013452
REFERENCE   4  (residues 1 to 701)
  AUTHORS   Papa,S., Capitanio,N., Glaser,P. and Villani,G.
  TITLE     The proton pump of heme-copper oxidases
  JOURNAL   Cell Biol Int 18 (5), 345-355 (1994)
   PUBMED   8049679
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012343.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00115.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..701
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /GO_process="GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /calculated_mol_wt=78422
     Region          251..678
                     /region_name="Heme_Cu_Oxidase_I"
                     /note="Heme-copper oxidase subunit I. Heme-copper oxidases
                     are transmembrane protein complexes in the respiratory
                     chains of prokaryotes and mitochondria which catalyze the
                     reduction of O2 and simultaneously pump protons across the
                     membrane. The superfamily is...; cl00275"
                     /db_xref="CDD:469701"
     Site            order(253,257..258,262,312,568,575,578..579,636..637,658)
                     /site_type="other"
                     /note="Low-spin heme binding site [chemical binding]"
                     /db_xref="CDD:238185"
     Site            order(422,427..428,561,565..566,636)
                     /site_type="other"
                     /note="Putative water exit pathway"
                     /db_xref="CDD:238185"
     Site            order(435,485..486,573)
                     /site_type="active"
                     /note="Binuclear center (active site) [active]"
                     /db_xref="CDD:238185"
     Site            order(435,439,450,485..486,511,514)
                     /site_type="active"
                     /note="K-pathway [active]"
                     /db_xref="CDD:238185"
     Site            order(486,565..566,636..637)
                     /site_type="other"
                     /note="Putative proton exit pathway"
                     /db_xref="CDD:238185"
ORIGIN      
        1 mmtvskckia sglclciylv aipahaetqf geavalslgi vtlvmalgll sililvkdvv
       61 qnyflskinp grkdyskylh nlssrqvsll ldrivkkqhl gfilltilsl vslpsfaqss
      121 qptadslmsq ggilitivli aipvlagaif lffkitntln ryrnqqrvee agrvaayldg
      181 ievevlaatl qqrkdaldfa lshnelsggl aandhkglin nveheaslpf varkrkahvr
      241 pkvdpqlsrl iawfvitatf wlvfgttvge yigikfvspd adqvswlsfg rlrpvhtnav
      301 fwgwaslaml glgnyvvprv snaklfsikl gwyslilint avllgtlclm aginngggey
      361 reyiwpvmll fgigllltli nyfktvasrt tkeiyisnwy ivssvifgiv ivvvayvplw
      421 qnglgetiiq gyymhqgvgm wfmlftlgiv yyflpqqlnk piysyslgil afwtqilfyt
      481 ligthhfvfs aipwwlqtva ivgsvgmiip vvagttnfll tfkgawykit dsytlpfflt
      541 gilfyftgsm qgtaeafrst nliwhftdft vahshltmyg iicfllwagi yalmpritgh
      601 eppqvtvgah fwlaligllf ytiplmygst mrglmwmeak pfidsvsfma pfwlwraigg
      661 slmwlshlff aynlyrmvvv pgtvdiketa feklrsmdrv s
//
LOCUS       WP_235179519             216 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235179519
VERSION     WP_235179519.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 216)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01966.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..216
                     /product="HD domain-containing protein"
                     /calculated_mol_wt=23912
     Region          5..164
                     /region_name="HDc"
                     /note="Metal dependent phosphohydrolases with conserved
                     'HD' motif; cl21469"
                     /db_xref="CDD:473873"
     Site            70
                     /site_type="other"
                     /note="Mg2+ binding site [ion binding]"
                     /db_xref="CDD:238032"
ORIGIN      
        1 msvnriksla gitipdsaia tqatellleh gtefiynhsl rvflfsslng krvnlqydae
       61 llyvssvfhd lgltphyssp dkrfevdgan aardflkshg lpgeslqlvw dtialhttig
      121 iaehkeaeva lmysgvgldv mgegyehlsp enreaiiaaf prsgfkqsii ptffsgfehk
      181 tdttfgnika dvcaymlpdf krknfcdcil hspwse
//
LOCUS       WP_235179520             246 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Dyadobacter chenhuakuii].
ACCESSION   WP_235179520
VERSION     WP_235179520.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..246
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=25880
     Region          7..244
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(13,15..16,18,37..39,91..93,139..141,154,158,
                     184..187)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(115,141,154,158)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mknlidkvil vtgasrgiga aiaralaaag akvivnyags qqaadqtvse itshggeaia
       61 iradvssaad vktlfdtaia lygkidvlvn nagimitkll kdttdedftr qfdinvrgtf
      121 ntmreaatrl sdkgsiinfs ssvnriilpt ystyvatkaa veqltrvfsk evgarginvn
      181 sispgptnte lftkgkpqev idklsslsaf nrigepddia kivvflasde akwinaqnig
      241 anggma
//
LOCUS       WP_235179521             127 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Dyadobacter chenhuakuii].
ACCESSION   WP_235179521
VERSION     WP_235179521.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..127
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=13483
     Region          <1..126
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mqqaarnved ngriiyiass ttsfpvpgma vyggskttpr ylvdilskei ghrgvtvnti
       61 ipfavdhsgi faepgsypel rkqlldscpm grlaevedva nvaeffasdl ssfvngqhll
      121 vnggatn
//
LOCUS       WP_235179591            1386 aa            linear   BCT 02-MAR-2025
DEFINITION  carbohydrate-binding protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235179591
VERSION     WP_235179591.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015387.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03422.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1386
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..1386
                     /product="carbohydrate-binding protein"
                     /GO_function="GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /calculated_mol_wt=152003
     Region          24..145
                     /region_name="CBM6_cellulase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); appended to
                     glycoside hydrolase (GH) domains, including GH5
                     (cellulase); cd04080"
                     /db_xref="CDD:271146"
     Site            order(35,59,61,63,93..94,133)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:271146"
     Site            order(42,50..56,109..116,140)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:271146"
     Region          152..273
                     /region_name="CBM6_cellulase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); appended to
                     glycoside hydrolase (GH) domains, including GH5
                     (cellulase); cd04080"
                     /db_xref="CDD:271146"
     Site            order(170,178..184,235..242,266)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:271146"
     Site            order(187,189,191,219..220,259)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:271146"
     Region          284..405
                     /region_name="CBM6_cellulase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); appended to
                     glycoside hydrolase (GH) domains, including GH5
                     (cellulase); cd04080"
                     /db_xref="CDD:271146"
     Site            order(302,310..316,369..376,400)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:271146"
     Site            order(319,321,323,353..354,393)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:271146"
     Region          412..534
                     /region_name="CBM6_cellulase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); appended to
                     glycoside hydrolase (GH) domains, including GH5
                     (cellulase); cd04080"
                     /db_xref="CDD:271146"
     Site            order(430,438..444,496..503,527)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:271146"
     Site            order(447,449,451,480..481,520)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:271146"
     Region          <564..605
                     /region_name="BID_2"
                     /note="Bacterial Ig-like domain 2; smart00635"
                     /db_xref="CDD:214752"
     Region          838..>904
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
     Region          1307..1382
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     pfam18962"
                     /db_xref="CDD:436869"
ORIGIN      
        1 mkkillsyfl fasfliqaqs ykalpgrvea edyaamnsvg teatsdadgg qnvgwiqdgs
       61 wmdysvtatv agyytfrfrv angyspeaal slksangdkl gervlpqtgg mqnyhtvnfv
      121 vflpqgnqtl rvyaekggfn lnwfeaaasr nvsgrieaed fdavsdvrte ttsdtdgnln
      181 vgyiddgdfl dyninlaggt ytatfrians ygsgiieikn aagtllgqln vpqtggwqnw
      241 atistqltlp sgsqvihlat phgafnfnwf elvpqaaaas gtalpakiea esfdasnnvg
      301 tettaddsgg envgwiqeds wmeyqvntae sgiytmsyrv sngyspeasf alkksdgtel
      361 grttvpqtgg mqvyktvnml vslpagnetl rvqalqtgwn fnwfeakasr plagkmeaet
      421 fdlssdvrle sttdtdggtt vgyiddgdwl dynvkiaaag aytigfrvsn sygngnievk
      481 ngagtvlgsi nvpqtggwnn yntirttvnl pagsqilriy anrgafnlnw feisagsvqe
      541 qstitfneig dkglnigtfd lvassnnnes pitftssnta vatvsnatgs wkatlvgagq
      601 ttitasqtgs ehflaaenvs rnltvtgqsn ptnptagaki tldpkrwyqv tnattgldkl
      661 fdgdtqtevl tgwgkvvnyy dayyplldge qitlegvkff dyvgstvdrp milsvindqw
      721 qripvatftg tvyngwvgpy pdrasnnqfn ldasvsniry lvltlpdvlp teiefygsht
      781 paapsngptr aknirlkdmm gvngyewnfq dgahieslve pkvaaaksfs gfrhymdwek
      841 leadegvfsf nptrsgswny dliyqrlkqe nievlaclkt lppwmlqsyp enerdsenvp
      901 vrygkdfkdp lsyieqakva fqyvarygsn lnvdpsllsv stiprwtndp pnevkigmdl
      961 ikyiecdner dkwwkgrkgy qtareyaanm safydghknt mgtavgvkna dpnmkvviag
     1021 mvtgpdylrg mvdwckefrg yradgsvnlc wdvvnfhlyt ddasssqggn strgaapevt
     1081 nanvildnfv kasrevsqdm pvwiteagyd lhqssplkai pignksaqqt qadwilrtsl
     1141 fsarhgiekv ffyqmyddnp aydwmfgtsg minddfsrrp vtdyfiqtkn lfgdyvyret
     1201 ihadpvvdry elngkslfil avpdevgrta eytlnlgesg iakvytptag sdymavqekg
     1261 ivdgkvtvtv tetpifvias napnartaas papeltpelp lhedvnvfpn patdfvnvel
     1321 anessanvev kvfdaktgrl ykndvvnksa nklshklnlt hmpigayiie vkqgnqstfr
     1381 kvakvh
//
LOCUS       WP_235179638             385 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Dyadobacter chenhuakuii].
ACCESSION   WP_235179638
VERSION     WP_235179638.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..385
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=44867
     Region          199..340
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mlpklkaqna krkitwvtpd yfvdcdfnid ifkhilntfd vhwivllpak narfseadfq
       61 elmeldglri eflyssyrqr dprrlgyyln llrkinrdgs dinyfncvpd pysmplfwll
      121 nknrtifcah dgevtgafnf aaitkiafky sysfarfvnm fsksqagkfk inyphseift
      181 tylalksfga ykpidtdqdk itflsfgvin yskniellie aacniyeqgy dnfkisings
      241 canweyyqsf irypelfecq irmidngeip alfsnasyfv qpyrqvsqsg amkvafyynl
      301 pvlasdfpgf rdevvegvng ylfdpsdvkn leklmierle khnrdygqlk skmqehitrr
      361 yankelaqny itmfnqvins shaaa
//
LOCUS       WP_235179702              62 aa            linear   BCT 02-MAR-2025
DEFINITION  IS3 family transposase, partial [Dyadobacter chenhuakuii].
ACCESSION   WP_235179702
VERSION     WP_235179702.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024729.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13333.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..62
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         <1..62
                     /product="IS3 family transposase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <1..61
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 navienffgt ikselfylkk yksiqqlake ikeyityynk erirlnlngm spaqyrahht
       61 nr
//
LOCUS       WP_235179690             405 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Dyadobacter chenhuakuii].
ACCESSION   WP_235179690
VERSION     WP_235179690.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..405
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=43593
     Region          18..402
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(24..25,28..29,32,78,128..129,131..133,136,156,
                     159..160,232,235..236,239..241,244,275,279,329..330,334,
                     339,355,358..359,362..363,366)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 metleltnle ekkigskwla fglcgvsyml sgtvstlmsv ylpvaipelk gqavsqaelg
       61 eigayvnaif lygwmvggll fgfvsdrigr vrsltlvigl ygistclvti vpdwysllal
      121 rffagmgigg vlllttvyis eiwqdknrav mlgilavffp vgivttgsln lifsdwrsaf
      181 gvgfipvvvs vlvlfllpes dkwrstrthv dqpeglfnkn nranllsgsl ifgsvliglw
      241 gifswlptwv qtlltagqdg qkerglvmil lgaggitggv fsgmlinkfg kkatlmftfg
      301 tcllmccilf ltnstfsnii yvetavlafc fgisqgalss yipelfpvsi rgtatgfcfn
      361 vgrfftatav ffigslvavl ggfgnallvf tvpflvaflv tarsk
//
LOCUS       WP_235179712             810 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor plug domain-containing protein [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235179712
VERSION     WP_235179712.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 810)
  AUTHORS   Oke,M., Sarra,R., Ghirlando,R., Farnaud,S., Gorringe,A.R.,
            Evans,R.W. and Buchanan,S.K.
  TITLE     The plug domain of a neisserial TonB-dependent transporter retains
            structural integrity in the absence of its transmembrane
            beta-barrel
  JOURNAL   FEBS Lett 564 (3), 294-300 (2004)
   PUBMED   15111112
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07715.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..810
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /calculated_mol_wt=89545
     Region          49..133
                     /region_name="MG2"
                     /note="MG2 domain; pfam01835"
                     /db_xref="CDD:426464"
     Region          <345..>395
                     /region_name="YfaS"
                     /note="Uncharacterized conserved protein YfaS,
                     alpha-2-macroglobulin family [General function prediction
                     only]; COG2373"
                     /db_xref="CDD:441940"
     Region          590..>809
                     /region_name="OMP_RagA_SusC"
                     /note="TonB-linked outer membrane protein, SusC/RagA
                     family; TIGR04056"
                     /db_xref="CDD:274948"
ORIGIN      
        1 mpwtnntvkk clipafllll tgfqwldddf tqriaarlsn yrtvfpqeka ylhldkpyyv
       61 tgdtlwfksy lvegslhlad sasnllyvdl iehrtgknva lrrvqlsggi ghgeivlads
      121 igqgaytira ytnwmrnfse dyffqkdiyl fdpetvsepa aaggldlkff peggqlvagv
      181 ntrvafkala dnglgqdvng filnksndtv afytsshlgm grfafepksg evyrafvkak
      241 dgqvsrfdfp kvmesgytmv vdnlssplkm rvivygvlpg kseslihivg hargivafva
      301 kgkvtskglm lnlpttglpd githltlfde qnkpvserlv finhdrnlkv sispgktayk
      361 prekaeieis vtdsagkpve tnlsvavtda gqilqqpyde tiasylllss dlkgfieqps
      421 yyfdpnktek kihmdmlmmt qgwsrflwed vltdslaapq rfveqgitle gevkrnnkkl
      481 sekvmlsmyl sndslntflt aetdpngrfg vynlvftdsl kirlqgmnkk gnaslsfrld
      541 pfaapkatlv kapfspvtvd akqlleylkr aeqdqeiark iresrerllq evtikgkkev
      601 qrdsrkiygs adasikvtnq masagrsild ilagrvagvq vvgsginasv yirgnrgepl
      661 fvldgmpvdk dmisslntfd vesidvlkgp gaaifgsrgg ngvisiltkr gnenydysqd
      721 ivpgvlvski agfnvpkefy apkyevskqq sttpdyrstl fwapmlrtnk dgkvkfeyfn
      781 tdavtnidir adalslsgtp gsgkatyavd
//
LOCUS       WP_235179732            1106 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4175 family protein [Dyadobacter chenhuakuii].
ACCESSION   WP_235179732
VERSION     WP_235179732.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025152.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13779.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..1106
                     /product="DUF4175 family protein"
                     /calculated_mol_wt=127801
     Region          <498..1056
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
ORIGIN      
        1 meglllriqe yrqkyyqnql lkgiifsagl lltvflffnt ieyfgrfssg vrgmlffgfl
       61 avlvfsffqw viqpiihlsg lkkpisdeqa alqigeyfpe igdklvntlq lrsltgtqsd
      121 lieasirqks gqllivkfsd airfnenkkr ikyaiyplaa iaaillfnps fftssserii
      181 hfqknytyap fsfilenknl kafrnedftl klelkgealp aaaylvlngs rfklnndgnq
      241 tysytfknlq rdvkfsfdaa gfaseeyrin vserpsllsf dvnlrypayl nkpaeglnnv
      301 gnlsvpegtt vewnfntsst kslaikfedd sslyrakgsd gehfeikktv krssqyqvnl
      361 qndettnsdk igyfinvvpd kfpvmnlenf qdttlynylv lggsisddyg fsqlkmfysv
      421 kradqkeasp akgipvpfnk tvntqsfyfq wyvdslklap ddkieyyaqv wdndgvngpk
      481 saksraiqft vpskdqleae ikkseketed qmqsamkkaq slqkdlnnld nklksnkeld
      541 fkeqkqieev lkkreelmke lralqeknqn anekskqfnq qspelqskld qlqklmnelm
      601 dkdteklyqe lkklleqkqs drmssmmekl knkennleke lertmklfkq mqleqkmenl
      661 veklddlank edqladksqe ndknknaddk kgkneelkke qekiqeefek akedskevek
      721 mseeleqpvd tqkeeqknas eqmeegkkql dkqqntkase sqkkaaksmk qmsqsmeesm
      781 eaaemeqmqe nldalrdile nlitlsfdqe tlmkdfrgvs lqdprfiklg qqqlklkdda
      841 kivedslyal anrviqiqsf itrelndmks ymdesvksik drqinqatak qqfamtsmnn
      901 lalmlsdvfn qmqqqmamam pgsgkgkkgk qkseqkgmge mqeklngemk klgegkegqg
      961 nnseklarma aeqamirkmi qdlmesqkgt evgkqmskel qeiaekmdet etdlvnkrit
     1021 pelikrnqei ttrlleseka mkeqdedeqr kaqtakqlpr qppaafekyi rekekqtell
     1081 rtipptfspf ykrevdtyfr kyqakn
//
LOCUS       WP_235179767             517 aa            linear   BCT 02-MAR-2025
DEFINITION  SusD/RagB family nutrient-binding outer membrane lipoprotein
            [Dyadobacter chenhuakuii].
ACCESSION   WP_235179767
VERSION     WP_235179767.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 517)
  AUTHORS   Koropatkin,N., Martens,E.C., Gordon,J.I. and Smith,T.J.
  TITLE     Structure of a SusD homologue, BT1043, involved in mucin O-glycan
            utilization in a prominent human gut symbiont
  JOURNAL   Biochemistry 48 (7), 1532-1542 (2009)
   PUBMED   19191477
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024181.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12771.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..517
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /calculated_mol_wt=57058
     Region          37..486
                     /region_name="SusD-like_2"
                     /note="Starch-binding associating with outer membrane;
                     pfam12771"
                     /db_xref="CDD:463695"
ORIGIN      
        1 mqksifhksl lplaigalaf lascsdshfe einkdhnrpg ntttttills aekqlidnir
       61 nensslrgtq lfaqyysqni ysdqsrydip rsysdtywsn aykalnnlne iiilnsdpak
      121 kdvaaagvag tnanqiaiar ilkayafqgl tdvfgnvpyq sygnpdpefq alqqtpenls
      181 payasqqkiy qdilnelkaa gdtlikykaa ntfgnydviy kgknelwakf anslrlriat
      241 rirtklpaes nahfedalak gvftsnadna vfkyqalapn eaplfratvt anrkdfavsh
      301 vlinvlkgel gtvkvqdprl pvyatknaag eyvgqpyglp vaaaglltat dvslpgaavn
      361 aanygevlqe yaevsflise yknwdqqayi ngvtaslqkw gvapaditty vaalpkadka
      421 nvlnqkylal ytqgdeawse irrtgyptfl vksgdvvwrr tangqttdyk fqplfgegvp
      481 lrlyyppkeq svnlanyqna vksqgnddit tllwwnk
//
LOCUS       WP_235179824             217 aa            linear   BCT 02-MAR-2025
DEFINITION  DDE-type integrase/transposase/recombinase, partial [Dyadobacter
            chenhuakuii].
ACCESSION   WP_235179824
VERSION     WP_235179824.1
KEYWORDS    RefSeq.
SOURCE      Dyadobacter chenhuakuii
  ORGANISM  Dyadobacter chenhuakuii
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Spirosomataceae; Dyadobacter.
REFERENCE   1  (residues 1 to 217)
  AUTHORS   Dyda,F., Hickman,A.B., Jenkins,T.M., Engelman,A., Craigie,R. and
            Davies,D.R.
  TITLE     Crystal structure of the catalytic domain of HIV-1 integrase:
            similarity to other polynucleotidyl transferases
  JOURNAL   Science 266 (5193), 1981-1986 (1994)
   PUBMED   7801124
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012870.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00665.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Dyadobacter chenhuakuii"
                     /db_xref="taxon:2909339"
     Protein         1..>217
                     /product="DDE-type integrase/transposase/recombinase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <16..212
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 mhlstgvfyy ktvkndlpvi dmlnelaeeh ptrgfdwyyg nlrnrglpwn rkrvlriyrs
       61 mdlklrrkrk rrilkrpkqp lieaktlnet wsmdfvsdal ssgrrvrtli vmddasreal
      121 aahadysica gkviqilqql elerglplsi rtdngpefis kklakwceek qieqkfiqpg
      181 kpmqngyner lnrtyredil dayffdsleq lrilsdk
//
LOCUS       WP_235179911             875 aa            linear   BCT 02-MAR-2025
DEFINITION  tape measure protein [Pseudomonas aeruginosa].
ACCESSION   WP_235179911
VERSION     WP_235179911.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040129.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20155.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..875
                     /product="tape measure protein"
                     /calculated_mol_wt=92478
     Region          306..>619
                     /region_name="HI1514"
                     /note="Phage tail tape-measure protein, controls tail
                     length [Mobilome: prophages, transposons]; COG3941"
                     /db_xref="CDD:443141"
     Region          <609..>862
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
ORIGIN      
        1 manrdleial rlradmkdgq aavealaaai rdvgskasea gtglqkvgat gavdqaqgai
       61 dklghsldgv sakaseagkg lqkvgttggv dqaqapidkl ghsldgvsdk aseaskdlqk
      121 vgatgavdqa qasvdrlgqs ldstgkragd asrqitqvgg saeqqaarik amvaaslqqk
      181 saqdeaadst qrlntavqag ntawrdsaqa qsnamntfhn aerarvqqva aekraaeaaa
      241 aaaaetsrqe aaarkllgai dptyrslaql adqerqlteh fragrieata yasaldrira
      301 rrdvlngign dartstvaln smgaairrvq gllvagvagy gvasfskevv ntnlqwqqal
      361 ytmeaatgsa akarqeleyv revserlgle llntsqaysr lvaaaketpe lggslrtife
      421 gvasattalh ltrqetngil laleqmvskg kvqtqelvlq lgqrvpgafs laakaldtnt
      481 kqlsewlekg mipaaeflpr fgaalqeayg pasqkaatgl qaelnrlena ftdlkiqage
      541 sgfidtftqa vrdlrdvlkd pavveglnll ikglgtaigy aakgaagvvn vtkfvaeeia
      601 arvngpagdd vprlddaiar eteymarvqs alddayeknd qkriqryeea lskaqaqiqq
      661 wqdqrdavln gagqvaalpa ttvtgtgptt ktpftpsgge dkaaarlakq nedwvkqlek
      721 eaatygkgra alreyeldqr nltgaleara raawatldaa ekqkkadeqa kkdattlkql
      781 nldylratgq tveaagaeie kkygdlqkrl latgdtegag lvsklmgiek akaelqqlqd
      841 qvdrifgeqs rqessiqaaq qaglvaanwp rgsnc
//
LOCUS       WP_235179933             442 aa            linear   BCT 02-MAR-2025
DEFINITION  shufflon system plasmid conjugative transfer pilus tip adhesin PilV
            [Pseudomonas aeruginosa].
ACCESSION   WP_235179933
VERSION     WP_235179933.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 442)
  AUTHORS   Komano,T.
  TITLE     Shufflons: multiple inversion systems and integrons
  JOURNAL   Annu Rev Genet 33, 171-191 (1999)
   PUBMED   10690407
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016785.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04917.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     gene            1..442
                     /gene="pilV"
     Protein         1..442
                     /product="shufflon system plasmid conjugative transfer
                     pilus tip adhesin PilV"
                     /calculated_mol_wt=46920
     Region          1..>62
                     /region_name="PulG"
                     /note="Type II secretory pathway, pseudopilin PulG [Cell
                     motility, Intracellular trafficking, secretion, and
                     vesicular transport, Extracellular structures]; COG2165"
                     /db_xref="CDD:441768"
     Region          52..350
                     /region_name="Shufflon_N"
                     /note="Bacterial shufflon protein, N-terminal constant
                     region; pfam04917"
                     /db_xref="CDD:309860"
ORIGIN      
        1 mrskrssgfi sielmialvv iaiataggis vlmsyldgld eqhaaqqqqq vtkaaekylk
       61 dnfstvlasa gatapavitv pmlrntrylp agfrdtniyg qqyqvlarkp aanqletliv
      121 ttggqvasel sirriaqlmg atggyisktn tsiaqgaawq valsnfgsap gaghlatalf
      181 fqdgaianey lyrnavpghp elnrmnttld mggnniaaag aitasgnitt sadisarnvt
      241 atgtvkagta dvagetytgg wfrtrgdtgw ynekwgggwy msdstwvrsw mnknvytgge
      301 mkagkltaeg rtevgeylql kgvategadc spnglagits tglwlscqng kwgrtaasmr
      361 mnttagvikd wctlhgqdsg mmyydyvrya itcggrfcav gfnqtfgtny sfgliteigp
      421 gfnypephkt pdstnvtvtc vn
//
LOCUS       WP_235179993              93 aa            linear   BCT 02-MAR-2025
DEFINITION  winged helix-turn-helix domain-containing protein
            [Acidithiobacillus thiooxidans].
ACCESSION   WP_235179993
VERSION     WP_235179993.1
KEYWORDS    RefSeq.
SOURCE      Acidithiobacillus thiooxidans
  ORGANISM  Acidithiobacillus thiooxidans
            Bacteria; Pseudomonadati; Pseudomonadota; Acidithiobacillia;
            Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024980.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13592.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Acidithiobacillus thiooxidans"
                     /db_xref="taxon:930"
     Protein         1..93
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /calculated_mol_wt=10559
     Region          <1..38
                     /region_name="HTH_33"
                     /note="Winged helix-turn helix; pfam13592"
                     /db_xref="CDD:433335"
ORIGIN      
        1 malstiyrml arhgwqklap dtyhpqgdke rrevwektar sqsdadlpyt yayaavppqd
       61 grmdslvlpe esskcmqifl nevayvipmk isp
//
LOCUS       WP_235180042             403 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [Acidithiobacillus].
ACCESSION   WP_235180042
VERSION     WP_235180042.1
KEYWORDS    RefSeq.
SOURCE      Acidithiobacillus
  ORGANISM  Acidithiobacillus
            Bacteria; Pseudomonadati; Pseudomonadota; Acidithiobacillia;
            Acidithiobacillales; Acidithiobacillaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Acidithiobacillus"
                     /db_xref="taxon:119977"
     Protein         1..403
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=43787
     Region          11..388
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(18..19,22..23,26,56,110..111,113..115,118,134,
                     137..138,141,221,224..225,228..230,233,261,265,322..323,
                     327,331,347,350..351,354..355,358)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 maikfkklsw iastyyaegl pyslvqqvsv qfftyagasl qvigllsffg lpwnlklfws
       61 pvidlfgnkk rwlvvmelil gavaalliwp aqhlnldlaa kifilmafms athdmsvdgy
      121 yiqtldtadq agfsglrvaa yrvamlvgng alvilagwis wtvcfltaaf mmwglaafhk
      181 wilpepppan tqhqghrwaa vreafqtyla qpgivwalaf illfragdam mfamvtpfln
      241 hlgygliarg iltgsvgtvt giggallggl iisrwglkra lfpltliqsl aipayawlaw
      301 adpsiwwvgv tiafeqgsag lgtavlmvfl mqrcqenyqa thfaigsalm svaatvvggf
      361 sgflaakvgf veffllafva aipslllaig mpdklyqdkk spi
//
LOCUS       WP_235180152             319 aa            linear   BCT 02-MAR-2025
DEFINITION  type IV secretion system DNA-binding domain-containing protein,
            partial [Acidithiobacillus thiooxidans].
ACCESSION   WP_235180152
VERSION     WP_235180152.1
KEYWORDS    RefSeq.
SOURCE      Acidithiobacillus thiooxidans
  ORGANISM  Acidithiobacillus thiooxidans
            Bacteria; Pseudomonadati; Pseudomonadota; Acidithiobacillia;
            Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.
REFERENCE   1  (residues 1 to 319)
  AUTHORS   Gomis-Ruth,F.X., Moncalian,G., de la Cruz,F. and Coll,M.
  TITLE     Conjugative plasmid protein TrwB, an integral membrane type IV
            secretion system coupling protein. Detailed structural features and
            mapping of the active site cleft
  JOURNAL   J Biol Chem 277 (9), 7556-7566 (2002)
   PUBMED   11748238
REFERENCE   2  (residues 1 to 319)
  AUTHORS   Gomis-Ruth,F.X., Moncalian,G., Perez-Luque,R., Gonzalez,A.,
            Cabezon,E., de la Cruz,F. and Coll,M.
  TITLE     The bacterial conjugation protein TrwB resembles ring helicases and
            F1-ATPase
  JOURNAL   Nature 409 (6820), 637-641 (2001)
   PUBMED   11214325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021897.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10412.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Acidithiobacillus thiooxidans"
                     /db_xref="taxon:930"
     Protein         1..>319
                     /product="type IV secretion system DNA-binding
                     domain-containing protein"
     Region          1..310
                     /region_name="TrwB_AAD_bind"
                     /note="Type IV secretion-system coupling protein
                     DNA-binding domain; pfam10412"
                     /db_xref="CDD:431268"
ORIGIN      
        1 mlggsgsgkt silwpminqa vsrgdrclif sfkgdfqqkg dfpfsllapw dkrsvrwqlg
       61 kdirtrlhae slaktliptp ekdpiwaqga qglltaiise vqskygenwg ffrlaqacsv
      121 alsdydslve tvmqesplar sflmgkdskt tasylaqmas nlsdvvnlgv adfsnangsp
      181 wsvrdwlagk gpaaailgyl pesetlssay casvieqtvk qilgfpdapp earriwlfld
      241 evpqagkips itsaleaars kgcrvvlgmq gvaqleehgy skntlriwag qcgvkivanl
      301 sdpddqkwas nrflvissg
//
LOCUS       WP_235180154             524 aa            linear   BCT 02-MAR-2025
DEFINITION  alkaline phosphatase family protein [Acidithiobacillus
            thiooxidans].
ACCESSION   WP_235180154
VERSION     WP_235180154.1
KEYWORDS    RefSeq.
SOURCE      Acidithiobacillus thiooxidans
  ORGANISM  Acidithiobacillus thiooxidans
            Bacteria; Pseudomonadati; Pseudomonadota; Acidithiobacillia;
            Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.
REFERENCE   1  (residues 1 to 524)
  AUTHORS   Wimalasekera,R., Pejchar,P., Holk,A., Martinec,J. and Scherer,G.F.
  TITLE     Plant phosphatidylcholine-hydrolyzing phospholipases C NPC3 and
            NPC4 with roles in root development and brassinolide signaling in
            Arabidopsis thaliana
  JOURNAL   Mol Plant 3 (3), 610-625 (2010)
   PUBMED   20507939
REFERENCE   2  (residues 1 to 524)
  AUTHORS   Saleh,M.T. and Belisle,J.T.
  TITLE     Secretion of an acid phosphatase (SapM) by Mycobacterium
            tuberculosis that is similar to eukaryotic acid phosphatases
  JOURNAL   J Bacteriol 182 (23), 6850-6853 (2000)
   PUBMED   11073936
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016101.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04185.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Acidithiobacillus thiooxidans"
                     /db_xref="taxon:930"
     Protein         1..524
                     /product="alkaline phosphatase family protein"
                     /GO_function="GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /calculated_mol_wt=58429
     Region          6..33
                     /region_name="TAT_signal_seq"
                     /note="Tat (twin-arginine translocation) pathway signal
                     sequence; TIGR01409"
                     /db_xref="CDD:273604"
     Region          45..500
                     /region_name="AcpA"
                     /note="acid phosphatase A; cd16013"
                     /db_xref="CDD:293737"
     Site            order(55,225,403,439..440)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293737"
     Site            order(55,225,403,440)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293737"
     Site            order(110..111,114,116,150..151,153,216,447,449,451..454,
                     475..478,480)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:293737"
ORIGIN      
        1 mmerqnrrqf lkqlglggaa vvtapklmgi ahaagvdekt ilrkkiehvv vifqenrsfd
       61 hyfgtfqpkn gqkvinllds sgnldprfng lqknpagipy gnlplpldip gfqnvqldnk
      121 pfhlapyipa kgtvhwdpkh rffrmmaevn ngkmdrfval aggskthlhr defrkmsaeq
      181 mafdlarpsg pvlghytged lpfyhrvahq ytlfdrfyqa msggstgnal ylvaarscin
      241 pdatadicap fdpreagleh gffdlpydhr kimvndlapi qgptdagrmk elkispppaa
      301 qtydnigdrl daakvswawy nenwnkvkpw alktafgpgd gsaiidtnql fvahhspfqy
      361 yprwpdyvka ghirdsddfl adaragklps vsflkatash dehpadsapa ygmewveqlv
      421 raaadgpawd ktaifityde gggfwdslpp kvvddygfgt ripamlispw arsglvdhhl
      481 astasilkfi etrfglnpln hrdrdaydll gafdwdqqpk dfsv
//
LOCUS       WP_235180168              68 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF202 domain-containing protein [Acidithiobacillus thiooxidans].
ACCESSION   WP_235180168
VERSION     WP_235180168.1
KEYWORDS    RefSeq.
SOURCE      Acidithiobacillus thiooxidans
  ORGANISM  Acidithiobacillus thiooxidans
            Bacteria; Pseudomonadati; Pseudomonadota; Acidithiobacillia;
            Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014687.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02656.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Acidithiobacillus thiooxidans"
                     /db_xref="taxon:930"
     Protein         1..68
                     /product="DUF202 domain-containing protein"
                     /calculated_mol_wt=8026
ORIGIN      
        1 mrttldfnvs glvfirffdy gwimtvgwif lgisvllggy gltryfevkk hywkflresp
       61 kpkvlnrf
//
LOCUS       WP_235180253             158 aa            linear   BCT 02-MAR-2025
DEFINITION  UTRA domain-containing protein [Escherichia coli].
ACCESSION   WP_235180253
VERSION     WP_235180253.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 158)
  AUTHORS   Aravind,L. and Anantharaman,V.
  TITLE     HutC/FarR-like bacterial transcription factors of the GntR family
            contain a small molecule-binding domain of the chorismate lyase
            fold
  JOURNAL   FEMS Microbiol Lett 222 (1), 17-23 (2003)
   PUBMED   12757941
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019322.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07702.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..158
                     /product="UTRA domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=18281
     Region          1..158
                     /region_name="PRK10079"
                     /note="phosphonate metabolism transcriptional regulator
                     PhnF; Provisional"
                     /db_xref="CDD:182227"
ORIGIN      
        1 mhlsthptsy ptryqeiaak leqelrqhyr cgdylpaeqq laarfevnrh tlrrvngial
       61 clidhyfadl tlwptlqrfd sgslhdflre qtgialrrsq trisarraqa kecqrleipn
      121 mspllcvrtl nhrdgesspa eysvsltrad mieftmeh
//
LOCUS       WP_235180280             141 aa            linear   BCT 02-MAR-2025
DEFINITION  Mor transcription activator family protein [Escherichia coli].
ACCESSION   WP_235180280
VERSION     WP_235180280.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   Kumaraswami,M., Howe,M.M. and Park,H.W.
  TITLE     Crystal structure of the Mor protein of bacteriophage Mu, a member
            of the Mor/C family of transcription activators
  JOURNAL   J Biol Chem 279 (16), 16581-16590 (2004)
   PUBMED   14729670
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020345.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08765.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..141
                     /product="Mor transcription activator family protein"
                     /calculated_mol_wt=16119
     Region          33..140
                     /region_name="Mor"
                     /note="Mor transcription activator family; pfam08765"
                     /db_xref="CDD:400902"
ORIGIN      
        1 maetqmsmfg gdseqlhali drlddipddv lkknwprtls elvevtgael qrqgiepvla
       61 gklarkvaaa qaaymggrgy ylpvgeslfa elrnneifsr wdrgekiesf rrhyrmsetq
      121 iytvireqrr lhlartqppl f
//
LOCUS       WP_235180398             191 aa            linear   BCT 02-MAR-2025
DEFINITION  integrase core domain-containing protein, partial [Bordetella
            pertussis].
ACCESSION   WP_235180398
VERSION     WP_235180398.1
KEYWORDS    RefSeq.
SOURCE      Bordetella pertussis
  ORGANISM  Bordetella pertussis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025063.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13683.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Bordetella pertussis"
                     /db_xref="taxon:520"
     Protein         <1..191
                     /product="integrase core domain-containing protein"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <2..73
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
     Region          <101..170
                     /region_name="CitB"
                     /note="DNA-binding response regulator, NarL/FixJ family,
                     contains REC and HTH domains [Signal transduction
                     mechanisms, Transcription]; COG2197"
                     /db_xref="CDD:441799"
ORIGIN      
        1 helgikhrft rpyrpqtngk aerfiqsalr ewayahtyqn sqhradamks wlhhynwhrp
       61 hqgigravpi srlnldeynl ltvhsypsam rvtndgvkpt mpistgaqll qitprqyevl
      121 vllargypik tvsrmlnisv atakthactl yqrlhvknkg eavytalqrg atlewaeaga
      181 reverptyvc r
//
LOCUS       WP_235180412             256 aa            linear   BCT 02-MAR-2025
DEFINITION  replication initiation protein, partial [Photobacterium
            phosphoreum].
ACCESSION   WP_235180412
VERSION     WP_235180412.1
KEYWORDS    RefSeq.
SOURCE      Photobacterium phosphoreum
  ORGANISM  Photobacterium phosphoreum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
REFERENCE   1  (residues 1 to 256)
  AUTHORS   Giraldo,R. and Diaz-Orejas,R.
  TITLE     Similarities between the DNA replication initiators of
            Gram-negative bacteria plasmids (RepA) and eukaryotes
            (Orc4p)/archaea (Cdc6p)
  JOURNAL   Proc Natl Acad Sci U S A 98 (9), 4938-4943 (2001)
   PUBMED   11296251
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015076.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03090.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Photobacterium phosphoreum"
                     /db_xref="taxon:659"
     Protein         1..>256
                     /product="replication initiation protein"
     Region          2..129
                     /region_name="Replicase"
                     /note="Replicase family; pfam03090"
                     /db_xref="CDD:427129"
     Region          <215..243
                     /region_name="GsiB"
                     /note="General stress protein YciG, contains tandem KGG
                     domains [General function prediction only]; COG3729"
                     /db_xref="CDD:442943"
ORIGIN      
        1 mtfirpkata itkkyiqvnr pstdfylvfd ldyeysalaw sflnlpppaw itknpknghc
       61 hlayalsagv ctssrarlap lkylaaiqsa ytqalkadrs yarlltknpl heawqttwwt
      121 dekytldyla dfvdltghpl kgkechglgr ncelfecvsn waykaireyw spnyqskwqe
      181 avlshtealn sqfvvplpys evksisksia nfvirnfspe rfresqavkg rkggriskgg
      241 grptkkadll pivmel
//
LOCUS       WP_235180416             535 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxyl transferase domain-containing protein [Pseudomonas
            aeruginosa].
ACCESSION   WP_235180416
VERSION     WP_235180416.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 535)
  AUTHORS   Zhang,H., Yang,Z., Shen,Y. and Tong,L.
  TITLE     Crystal structure of the carboxyltransferase domain of
            acetyl-coenzyme A carboxylase
  JOURNAL   Science 299 (5615), 2064-2067 (2003)
   PUBMED   12663926
REFERENCE   2  (residues 1 to 535)
  AUTHORS   Thornton,C.G., Kumar,G.K., Haase,F.C., Phillips,N.F., Woo,S.B.,
            Park,V.M., Magner,W.J., Shenoy,B.C., Wood,H.G. and Samols,D.
  TITLE     Primary structure of the monomer of the 12S subunit of
            transcarboxylase as deduced from DNA and characterization of the
            product expressed in Escherichia coli
  JOURNAL   J Bacteriol 175 (17), 5301-5308 (1993)
   PUBMED   8366018
REFERENCE   3  (residues 1 to 535)
  AUTHORS   Toh,H., Kondo,H. and Tanabe,T.
  TITLE     Molecular evolution of biotin-dependent carboxylases
  JOURNAL   Eur J Biochem 215 (3), 687-696 (1993)
   PUBMED   8102604
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013225.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01039.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..535
                     /product="carboxyl transferase domain-containing protein"
                     /calculated_mol_wt=57322
     Region          3..535
                     /region_name="Carboxyl_trans"
                     /note="Carboxyl transferase domain; cl47203"
                     /db_xref="CDD:481543"
ORIGIN      
        1 mailhtqinp rsaefaanaa tmleqvnalr tllgrihegg gsaaqarhsa rgkllvreri
       61 nrlldpgspf lelsalaahe vygeevaaag ivagigrveg vecmivgnda tvkggtyypl
      121 tvkkhlraqa ialenrlpci ylvdsgganl prqdevfpdr ehfcriffnq anmsargipq
      181 iavvmgscta ggayvpamsd etvmvreqat iflagpplvk aatgevvsae elggadvhck
      241 vsgvadhyae dddhalaiar rcvanlnwrk qgqlqcrapr aplypaeely gvipadskqp
      301 ydvreviarl vdgsefdefk alfgttlvcg fahlhgypia ilanngilfa eaaqkgahfi
      361 elacqrgipl lflqnitgfm vgqkyeaggi akhgaklvta vacarvpkft vliggsfgag
      421 nygmcgrayd prflwmwpna rigvmggeqa agvlaqvkre qaeragqqlg veeeakikap
      481 ileqyehqgh pyyssarlwd dgvidpaqtr evlalalsaa lsapieptaf gvfrm
//
LOCUS       WP_235180417            2335 aa            linear   BCT 02-MAR-2025
DEFINITION  LPD23 domain-containing protein [Pseudomonas aeruginosa].
ACCESSION   WP_235180417
VERSION     WP_235180417.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 2335)
  AUTHORS   Iyer,L.M., Burroughs,A.M., Anand,S., de Souza,R.F. and Aravind,L.
  TITLE     Polyvalent Proteins, a Pervasive Theme in the Intergenomic
            Biological Conflicts of Bacteriophages and Conjugative Elements
  JOURNAL   J Bacteriol 199 (15), e00245-17 (2017)
   PUBMED   28559295
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037424.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18838.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2335
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..2335
                     /product="LPD23 domain-containing protein"
                     /calculated_mol_wt=252637
     Region          1962..2133
                     /region_name="HsdM"
                     /note="Type I restriction-modification system, DNA
                     methylase subunit [Defense mechanisms]; COG0286"
                     /db_xref="CDD:440055"
     Region          2148..2204
                     /region_name="LPD23"
                     /note="Large polyvalent protein associated domain 23;
                     pfam18838"
                     /db_xref="CDD:465885"
ORIGIN      
        1 madtwgendk ivdtadfgan devvgkgeeg rgvighardl glsvvkgvig vpeaavglad
       61 iptegrvgkf lenqdgmlgf rpreakdfls dlhtdqykqq qqdfqdadgv vdktlhavqn
      121 psmvvntvae slpsmlagga vgrgvralap alapvaagaa gegavmagqq aeqirqetdd
      181 glltpaqsga avatgvlgsl fslaggslak klgigdadtl lagganpgql agelasmpak
      241 siprkviega isegfleelp qsaseqvlqn lalgrdwasg ldeamvmgtl agmamggpaa
      301 vlhggqpaas rgltdadatf estpdlegqt ettaplalpg pvyeagsdgq vrttvdqnsa
      361 tqvqrqqeae rldrirrgev tdvtpvpaap krseqmgldp atgplsgaaa qavdsgatdq
      421 mvqqaalqqa aeeaqksgrk geqvnpetge itaeqgdlla sdpvtdlqgr lefvrrqara
      481 tgwdakkiae rdrlqeeldk lspapdagym qrvgervkri eaaqspdeia ailaedqqde
      541 qrhqnaagrv elaarargfa ldqavqqqap tpigvqddiq qaqgkadaqq aqaaqpavsl
      601 apaaksvpaa pateakannl kdaiskvrqa kqkpeqpaal qavrrgevgg klgsgevvtt
      661 ssgrqttpfp kvsvdtnrka tgtikgvdlw lmqnaldear srgdefnarq feanlakpqr
      721 adkdaaeeyl fgqqpavqpr vlkplapkpt atdnsaswvi rnketgevia etfdrkkvda
      781 lntekyeavp iqqhlaslnk pkapsiegkd igegwaefsk esgtvgipra dmpqikaehr
      841 gamvnflhar gvqhqeetvp adslkptqae fsrdkvakak gfeggnrsil vsrdghvldg
      901 hhqwmaardn geevrvirld apirdlvkla hefpssttda ssgqgatvda rqvrpkpepa
      961 apdvpkkrpr gvlakrfqae aqaraeyftp gnvvrgygan ydrvisynpt esgswtvtvr
     1021 svrkegdtwv dvpgeserth mtapdardmk rgpagriatl gaptadefpl keaaasysgi
     1081 snsssqraks dadefqtyid vardagavva rtdaqqaave qatrelrady laqyrrlmnv
     1141 ragtysgyvv grsglnskqa drrnsaydra idtfvawqka nqdrvrqaal dartdeekaa
     1201 drqaaeqara dkaqrkedgd rslmrrilsw kkgsepvait ktahlagvnf gkdgyptsik
     1261 ltptdgsvlt sdkfdlatlf rergmsvpes krrvrelvdf vraedaarpq sepaeapkpd
     1321 paqpsdsktp tldehvalmq rarsgeatad efrqafertq nardalvael gtmkkdellk
     1381 sggysffhry rnekkaaivd alagrvleef algrsygpss yvmsaaglea hrqakasala
     1441 elvanttddd ikahaaevae aqqeiqarra aqqkavanpq tlaefrqavs ynmethgesl
     1501 reafmrltpe qrirydelea estkalreqa kaqaktrvas agqttagdii etkhtkhghd
     1561 lfvvqlaerv sredydtlnn sakrlggsys syrgngavpg fqfrtreaae afrklvtgdt
     1621 adaqavaear rdafeddrsq gaaerlrtma qalneradea lnrerkqnte rrarmaarae
     1681 asarsdkala atmnnladai eggkakfldt vrqkvqvefl arelrnakda qirakyptyg
     1741 eqekhrgepv daetvdystf psytamrsdl aslarqmadv dglkklaarl ekvaddvtea
     1801 ytdwakqnll svsrftrgdq fadfksreda erairrsglt gkaivlpvkr gqnrivmaps
     1861 eamklglwqg dgdkritlsg efggelvqal grrsgskitv pwalesahek rkrlesmgil
     1921 tgseyrsalr efvalreapa epdkikqmer amigrrndgl dffptsaavt eeaidaadiq
     1981 ggmevlepsa gmghmadair eqtgvepevv elsgerrell eakgynlvgs dfmevsgkqy
     2041 drivmnppfs kgrdiqhvqh aysllkpggr lvaimsegaf fqsnkaaenf rawldglgat
     2101 serlpegsfm dpalpvntgv narmvvidkp aaeesaapqp geqppvqysf agrnavganl
     2161 yalstaqqri amgenaeavr rdtgwhrgtd gkwrfeisdh qasiavaget agaiidmahl
     2221 naindersrp tvgdvlshpq lfaaypdlqr ipvavmpegg tavsllvtkl rfrptcrapr
     2281 wprrsctnss mryrsgkvsp waarpglssa tsirlvrrpi vvwlerwrra trrlg
//
LOCUS       WP_235180272             238 aa            linear   BCT 02-MAR-2025
DEFINITION  oligogalacturonate-specific porin KdgM family protein [Escherichia
            coli].
ACCESSION   WP_235180272
VERSION     WP_235180272.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 238)
  AUTHORS   Blot,N., Berrier,C., Hugouvieux-Cotte-Pattat,N., Ghazi,A. and
            Condemine,G.
  TITLE     The oligogalacturonate-specific porin KdgM of Erwinia chrysanthemi
            belongs to a new porin family
  JOURNAL   J Biol Chem 277 (10), 7936-7944 (2002)
   PUBMED   11773048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017942.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06178.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..238
                     /product="oligogalacturonate-specific porin KdgM family
                     protein"
                     /calculated_mol_wt=27784
     Region          24..236
                     /region_name="KdgM"
                     /note="Oligogalacturonate-specific porin protein (KdgM);
                     cl11629"
                     /db_xref="CDD:416341"
ORIGIN      
        1 mkkakilsgv lllcfsspli sqaatldvrg gyrsgshaye trlkvsegwq ngwwasmesn
       61 twntihdnkk enaalndvqv evnyaikldd qwtvrpgmlt hfssngtryg pyvklswdat
      121 kdlnfgiryr ydwkayrqqd lsgdmsrdnv hrwdgyvtyh insdftfawq ttlynkqndy
      181 ryanhkkwat enafvlqyhm tpditpyiey dyldrqgvyn grdnlsensy rigvsfkl
//
LOCUS       WP_235180707             405 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: TrbI/VirB10 family protein [Ralstonia].
ACCESSION   WP_235180707
VERSION     WP_235180707.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia
  ORGANISM  Ralstonia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
REFERENCE   1  (residues 1 to 405)
  AUTHORS   Alt-Morbe,J., Stryker,J.L., Fuqua,C., Li,P.L., Farrand,S.K. and
            Winans,S.C.
  TITLE     The conjugal transfer system of Agrobacterium tumefaciens
            octopine-type Ti plasmids is closely related to the transfer system
            of an IncP plasmid and distantly related to Ti plasmid vir genes
  JOURNAL   J Bacteriol 178 (14), 4248-4257 (1996)
   PUBMED   8763954
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015688.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03743.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Ralstonia"
                     /db_xref="taxon:48736"
     Protein         1..405
                     /product="TrbI/VirB10 family protein"
                     /calculated_mol_wt=41971
     Region          <41..367
                     /region_name="T4SS_IcmE_DotG"
                     /note="type IVB secretion system protein DotG/IcmE;
                     NF033900"
                     /db_xref="CDD:468233"
     Region          209..389
                     /region_name="VirB10"
                     /note="VirB10 forms part of core complex in Type IV
                     secretion system (T4SS); cd16429"
                     /db_xref="CDD:319755"
     Site            order(211..214,218..219,221..224,228,230..231,236..238,
                     240,253,255,257,259,265,270,272,274,277,279,281,284..289,
                     292,298..300,310,312,315,318,320,323,360..369,375,377,
                     379..381,383,386,389)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:319755"
ORIGIN      
        1 mryfthpret adqrarreql eqlakeqpas gdalaqklen qftraqtehp apvapaapkt
       61 ppsgpvpngm vggasspagl pggapgfqeg ltpeqrlalq rasqendama vvsygdreqg
      121 aaasagtnpi sdyiaalqrq hadkrtapge agtpaiqaql aalaaansqs qntpgsatna
      181 rhvawqgqqt nqgqsatltp qaaespfmvm pgtpipvvln qgvnsdmpgq ysatvdrdiy
      241 dsisgscrli akgtrivgas nsdvaigqer mqmgaalmif rngasmvldg lngadpngea
      301 gvsadvnnhf fkifgstfli agiaqyigrn qsqptgttln inggggatgl tsaagqavsq
      361 ttqtilqrns niqptlrldp gqklvfitka pirippntva gecyq
//
LOCUS       WP_235180749             314 aa            linear   BCT 02-MAR-2025
DEFINITION  T6SS immunity protein Tli4 family protein [Ralstonia
            pseudosolanacearum].
ACCESSION   WP_235180749
VERSION     WP_235180749.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia pseudosolanacearum
  ORGANISM  Ralstonia pseudosolanacearum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Ralstonia; Ralstonia
            solanacearum species complex.
REFERENCE   1  (residues 1 to 314)
  AUTHORS   Lu,D., Zheng,Y., Liao,N., Wei,L., Xu,B., Liu,X. and Liu,J.
  TITLE     The structural basis of the Tle4-Tli4 complex reveals the
            self-protection mechanism of H2-T6SS in Pseudomonas aeruginosa
  JOURNAL   Acta Crystallogr D Biol Crystallogr 70 (Pt 12), 3233-3243 (2014)
   PUBMED   25478841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037813.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18426.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Ralstonia pseudosolanacearum"
                     /db_xref="taxon:1310165"
     Protein         1..314
                     /product="T6SS immunity protein Tli4 family protein"
                     /calculated_mol_wt=34529
     Region          7..135
                     /region_name="Tli4_N"
                     /note="Tle cognate immunity protein 4 N-terminal domain;
                     pfam18443"
                     /db_xref="CDD:436506"
     Region          142..303
                     /region_name="Tli4_C"
                     /note="Tle cognate immunity protein 4 C-terminal domain;
                     pfam18426"
                     /db_xref="CDD:436493"
ORIGIN      
        1 mshagwktfc fgrylvdlpq qakvsaiyki rgkniefvpg eepaklksri drreaelrta
       61 rhetsgamfv rriplnngse ilfswsspys kvmlrsdvyl vaagaarvfr yggdvstdre
      121 naaiqnaadl aaniqsladk kipvepgfci dkgfiagsdy rsegfqvgit lpqhpnalit
      181 idastgaeqd rllervdkff atavaaqlsg lkilrkrqrd vgpieaeeya taasgngqrv
      241 yafawesqgk dkslseqniv aalkvleqsv vtehtpyrpa fksdeealql wdtiidsirl
      301 rpgavqpmra lasp
//
LOCUS       WP_235180789             295 aa            linear   BCT 02-MAR-2025
DEFINITION  SMI1/KNR4 family protein [Escherichia albertii].
ACCESSION   WP_235180789
VERSION     WP_235180789.1
KEYWORDS    RefSeq.
SOURCE      Escherichia albertii
  ORGANISM  Escherichia albertii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 295)
  AUTHORS   Zhang,D., Iyer,L.M. and Aravind,L.
  TITLE     A novel immunity system for bacterial nucleic acid degrading toxins
            and its recruitment in various eukaryotic and DNA viral systems
  JOURNAL   Nucleic Acids Res 39 (11), 4532-4552 (2011)
   PUBMED   21306995
REFERENCE   2  (residues 1 to 295)
  AUTHORS   Enderlin,C.S. and Selitrennikoff,C.P.
  TITLE     Cloning and characterization of a Neurospora crassa gene required
            for (1,3) beta-glucan synthase activity and cell wall formation
  JOURNAL   Proc Natl Acad Sci U S A 91 (20), 9500-9504 (1994)
   PUBMED   7937796
REFERENCE   3  (residues 1 to 295)
  AUTHORS   Hong,Z., Mann,P., Brown,N.H., Tran,L.E., Shaw,K.J., Hare,R.S. and
            DiDomenico,B.
  TITLE     Cloning and characterization of KNR4, a yeast gene involved in
            (1,3)-beta-glucan synthesis
  JOURNAL   Mol Cell Biol 14 (2), 1017-1025 (1994)
   PUBMED   8289782
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020904.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09346.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Escherichia albertii"
                     /db_xref="taxon:208962"
     Protein         1..295
                     /product="SMI1/KNR4 family protein"
                     /calculated_mol_wt=34412
     Region          46..175
                     /region_name="SMI1_KNR4"
                     /note="SMI1 / KNR4 family (SUKH-1); cl01747"
                     /db_xref="CDD:445532"
ORIGIN      
        1 mqltneeqaq iarikekipr iaaldpeckl fgsegwkyqw pkpareakia swekkhgvtl
       61 preyriflry ianggpahay glksldstyv ygditkespi plymtqqdvd vlnagrteed
      121 deftffdgal tiltlgctyd iclvvtgqyr grlmltdgde eypfdfiydk nfldwyerwl
      181 ddfiagmsmk gfdrslpgtq iqlcewflte kipdlrrpil fslcrfpqte petlalwehv
      241 crtendkelc eeafirlrqk kllvlqiffd silqcqvnyv illlkifvlp veivw
//
LOCUS       WP_235180809             150 aa            linear   BCT 02-MAR-2025
DEFINITION  HEAT repeat domain-containing protein [Escherichia albertii].
ACCESSION   WP_235180809
VERSION     WP_235180809.1
KEYWORDS    RefSeq.
SOURCE      Escherichia albertii
  ORGANISM  Escherichia albertii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025030.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13646.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Escherichia albertii"
                     /db_xref="taxon:208962"
     Protein         1..150
                     /product="HEAT repeat domain-containing protein"
                     /calculated_mol_wt=16836
     Region          <1..150
                     /region_name="PRK09687"
                     /note="putative lyase; Provisional"
                     /db_xref="CDD:170047"
     Site            order(27..28,31,34..35,64..65,68,71..72,75,95..96,99,
                     104..105,108,128..129,132,135..136)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          47..75
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          77..109
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          110..136
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
ORIGIN      
        1 mtqtqlfksf dlaesilqre sfasvktatv naighfcrkd kkltnraikl lskttydqse
       61 ktccataaaf ssvdsndtip flltllndcd gdvryravft infnqygste fresfirmlt
      121 dkndcvriea isglaerkdn rvitiiinel
//
LOCUS       WP_235180830             129 aa            linear   BCT 02-MAR-2025
DEFINITION  phage protease [Pseudomonas aeruginosa].
ACCESSION   WP_235180830
VERSION     WP_235180830.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021627.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10123.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..129
                     /product="phage protease"
                     /calculated_mol_wt=14405
     Region          1..>116
                     /region_name="COG4388"
                     /note="Mu-like prophage I protein [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:443514"
ORIGIN      
        1 mslavlriss qlpkafriip vgrfhahdgr egghwylmpe rgrqiaalan qnsqgllidf
       61 eheslkkada peagratvle wrddglyvad aswtaeakaq iasgkkrfis pvfrfngqpg
      121 kcwhwralr
//
LOCUS       WP_235180821             140 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-dependent oxidoreductase [Escherichia albertii].
ACCESSION   WP_235180821
VERSION     WP_235180821.1
KEYWORDS    RefSeq.
SOURCE      Escherichia albertii
  ORGANISM  Escherichia albertii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 140)
  AUTHORS   van Der Ploeg,J.R., Iwanicka-Nowicka,R., Bykowski,T.,
            Hryniewicz,M.M. and Leisinger,T.
  TITLE     The Escherichia coli ssuEADCB gene cluster is required for the
            utilization of sulfur from aliphatic sulfonates and is regulated by
            the transcriptional activator Cbl
  JOURNAL   J Biol Chem 274 (41), 29358-29365 (1999)
   PUBMED   10506196
REFERENCE   2  (residues 1 to 140)
  AUTHORS   Kertesz,M.A., Schmidt-Larbig,K. and Wuest,T.
  TITLE     A novel reduced flavin mononucleotide-dependent methanesulfonate
            sulfonatase encoded by the sulfur-regulated msu operon of
            Pseudomonas aeruginosa
  JOURNAL   J Bacteriol 181 (5), 1464-1473 (1999)
   PUBMED   10049377
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015325.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03358.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Escherichia albertii"
                     /db_xref="taxon:208962"
     Protein         1..140
                     /product="NAD(P)H-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=15257
     Region          3..>80
                     /region_name="FMN_red"
                     /note="NADPH-dependent FMN reductase; cl00438"
                     /db_xref="CDD:469770"
ORIGIN      
        1 mkriviings pkktasatdk lasemqvllp teyvchtvna lqlsvsrgaa hteggyqqic
       61 radvllfifp vyadalpasl lqmmhqitpp asptppqvya itqcgfyese htrtalrima
      121 hfcaqygfcw qgawgsavvr
//
LOCUS       WP_235180934             216 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-binding dehydrogenase [Nesterenkonia sp. AN1].
ACCESSION   WP_235180934
VERSION     WP_235180934.1
KEYWORDS    RefSeq.
SOURCE      Nesterenkonia sp. AN1
  ORGANISM  Nesterenkonia sp. AN1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Nesterenkonia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00107.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Nesterenkonia sp. AN1"
                     /db_xref="taxon:652017"
     Protein         1..216
                     /product="zinc-binding dehydrogenase"
                     /calculated_mol_wt=23075
     Region          <7..214
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
     Site            order(35,39,59..64,82..83,87,112,116..117,139..140,
                     164..166)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176178"
ORIGIN      
        1 mgrrwsfady atvpasytyp lgpeadpvrt apllcagiig yrafmrsrlp pggrlglygf
       61 gssghltaql amafgaqvcv mtrgqtnrrl arqlgvdfvs dafaeppgpl daaiifapag
      121 elvpaalrat arggtvtiag ihmsdipqmp yqqtlfyerd lrtvtantrt dgieflrlaq
      181 hlgiaaevtv yrfdalptal edlrasrvsg slvlsd
//
LOCUS       WP_235181002             714 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3418 domain-containing protein [Nesterenkonia sp. AN1].
ACCESSION   WP_235181002
VERSION     WP_235181002.1
KEYWORDS    RefSeq.
SOURCE      Nesterenkonia sp. AN1
  ORGANISM  Nesterenkonia sp. AN1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Nesterenkonia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023326.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11898.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Nesterenkonia sp. AN1"
                     /db_xref="taxon:652017"
     Protein         1..714
                     /product="DUF3418 domain-containing protein"
                     /calculated_mol_wt=79014
     Region          <1..46
                     /region_name="OB_NTP_bind"
                     /note="Oligonucleotide/oligosaccharide-binding (OB)-fold;
                     pfam07717"
                     /db_xref="CDD:400182"
     Region          59..709
                     /region_name="DUF3418"
                     /note="Domain of unknown function (DUF3418); pfam11898"
                     /db_xref="CDD:463389"
ORIGIN      
        1 mfpgshlfkk nhdwvmasel vetsrlwars vakidpawve elaphlvkts hseprwssrq
       61 gavvatekvt lfgvpviadr qvlyskvdpe ysrelfiqra lvdgdwstrh hfdrrnrarf
      121 aeldelenrt rrkdlrasde elfnffaari penivsqrhf dswwknqrla tpelldltdv
      181 elmaqaaeel didaypehfd hdglalelqy efnptrytae sgtsptaaad gvtvrvpvvf
      241 lnqlqperfd wlipglrtel italirnmpk pvrknfvpap dvagkartal eqdftpgvds
      301 ltgslaavlr qlkghvldpe vfdtsalpeh lrftfavise rgrvldsgfd lrelqvrfsg
      361 enrqaigrsl aaegdtdapr qtpqpgrpgs aarsqppaaq saagadarsq tsrgkqqqas
      421 assaaagkqq qtswtfgdlp reittvvsgr qitgypalap assgvsytiq dsaaeqsrvh
      481 ragvvallre vlpspqryvl dhlsnrerla fsqsphgtve slvsdattaa lahlvpaqlp
      541 fgeaefevia rscraeliet vlrltdvlaq vlslstelgs rlervssaal kaarsdltaq
      601 lqqlvypgfv tatgqaqlqh mprylqavrt rldrlesgqn ltrdaqdmat vqeledeyda
      661 aleavpaqlp vpaelaavkw mieefrvnlf aqqlgtaqtv svkrirraik tssr
//
LOCUS       WP_235181082             281 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ATP-binding cassette domain-containing protein
            [Nesterenkonia].
ACCESSION   WP_235181082
VERSION     WP_235181082.1
KEYWORDS    RefSeq.
SOURCE      Nesterenkonia
  ORGANISM  Nesterenkonia
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae.
REFERENCE   1  (residues 1 to 281)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 281)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 281)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 281)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Nesterenkonia"
                     /db_xref="taxon:57494"
     Protein         1..281
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=30391
     Region          <11..268
                     /region_name="GsiA"
                     /note="ABC-type glutathione transport system ATPase
                     component, contains duplicated ATPase domain
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1123"
                     /db_xref="CDD:440740"
ORIGIN      
        1 msqtrhldqg apeglleavg varvfpagrg gspvvavrda nisiqsgqrr aligssgsgk
       61 stllslllaa drptrgfvrf egtavhprrt sqmrafrrqv qfipqdcaas ldprmsveql
      121 vtdplrrlkl pgdhqlrard aleqvhlpas lmakkraeis ggqaqrvaia raiaigpktl
      181 ladepvsgld lplrdqvlsl lrelssvrgl gvllvthdld aaralchdav vmdhgslver
      241 geisrlmdhp ehaatarlvh smpriapelr dahrehrgrh s
//
LOCUS       WP_235181088             388 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase [Nesterenkonia sp. AN1].
ACCESSION   WP_235181088
VERSION     WP_235181088.1
KEYWORDS    RefSeq.
SOURCE      Nesterenkonia sp. AN1
  ORGANISM  Nesterenkonia sp. AN1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Nesterenkonia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Nesterenkonia sp. AN1"
                     /db_xref="taxon:652017"
     Protein         1..388
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=39413
     Region          121..385
                     /region_name="Peptidases_S8_S53"
                     /note="Peptidase domain in the S8 and S53 families;
                     cl10459"
                     /db_xref="CDD:415849"
     Site            order(164,228,349)
                     /site_type="active"
                     /db_xref="CDD:173787"
     Site            order(164,349)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:173787"
ORIGIN      
        1 mgryvvtfdt adsqmlehda pgllsaqgfs tdsyfprlgv gvvdgeagdl eafsgrcrdr
       61 rapmsyspel tyyaiggraa dlpavelpsa vgsveapftd taeltwglqa vevgraqeag
      121 ltgagvriav ldtgfdlehp dflgravtae sfipgegpad vhghgthcvg sacgpwapps
      181 grgfgvasrv eifsgkvlga dgsgsdasil agidwalqnd cqivsmslga dvrevhppyv
      241 tagrralerg slliaaagnn agrsagdpgf vgapanspyv mavaaldagl qvadfsarsl
      301 phdggevdia gpgvdiyssw pgpahhrsis gtsmaaphvs gvaallsast glrgqplwde
      361 lirtarqlsg admedvgagl avipaqgg
//
LOCUS       WP_235181154             375 aa            linear   BCT 02-MAR-2025
DEFINITION  GTPase [Helicobacter pylori].
ACCESSION   WP_235181154
VERSION     WP_235181154.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter pylori
  ORGANISM  Helicobacter pylori
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 375)
  AUTHORS   Shields,M.J., Fischer,J.J. and Wieden,H.J.
  TITLE     Toward understanding the function of the universally conserved
            GTPase HflX from Escherichia coli: a kinetic approach
  JOURNAL   Biochemistry 48 (45), 10793-10802 (2009)
   PUBMED   19824612
REFERENCE   2  (residues 1 to 375)
  AUTHORS   Dutta,D., Bandyopadhyay,K., Datta,A.B., Sardesai,A.A. and
            Parrack,P.
  TITLE     Properties of HflX, an enigmatic protein from Escherichia coli
  JOURNAL   J Bacteriol 191 (7), 2307-2314 (2009)
   PUBMED   19181811
REFERENCE   3  (residues 1 to 375)
  AUTHORS   Jain,N., Dhimole,N., Khan,A.R., De,D., Tomar,S.K., Sajish,M.,
            Dutta,D., Parrack,P. and Prakash,B.
  TITLE     E. coli HflX interacts with 50S ribosomal subunits in presence of
            nucleotides
  JOURNAL   Biochem Biophys Res Commun 379 (2), 201-205 (2009)
   PUBMED   19109926
REFERENCE   4  (residues 1 to 375)
  AUTHORS   Bassler,J., Kallas,M. and Hurt,E.
  TITLE     The NUG1 GTPase reveals and N-terminal RNA-binding domain that is
            essential for association with 60 S pre-ribosomal particles
  JOURNAL   J Biol Chem 281 (34), 24737-24744 (2006)
   PUBMED   16803892
REFERENCE   5  (residues 1 to 375)
  AUTHORS   Vernet,C., Ribouchon,M.T., Chimini,G. and Pontarotti,P.
  TITLE     Structure and evolution of a member of a new subfamily of
            GTP-binding proteins mapping to the human MHC class I region
  JOURNAL   Mamm Genome 5 (2), 100-105 (1994)
   PUBMED   8180467
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014036.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01926.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Helicobacter pylori"
                     /db_xref="taxon:210"
     Protein         1..375
                     /product="GTPase"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
                     /calculated_mol_wt=43372
     Region          21..>183
                     /region_name="YeeP"
                     /note="Predicted GTPase [General function prediction
                     only]; COG3596"
                     /db_xref="CDD:442815"
ORIGIN      
        1 mkniyldvka nieklqnifr ntnnenerlk ksnqealevf qklefeslke leslknneew
       61 enftiafyge tnagkstlie clrlffkers kmdqqerfrr lyaeknhrgs ghallelekf
      121 qdgaiigdgr sdfttetksy tlkhgnktft lldipgiegd ekkviqqisn atqkahaify
      181 vtkkptppqk geekkegtie kiqkqldsqt eiytlynksi nnpralkdgl idgsekeslk
      241 ilnkemknil gkhcmghqiv saqmafygls salipesdfy knkqkfldfk aeelllykch
      301 fkqlggfiar tllensrkki iesncnkalk vveqlqkaik ttiekridpm ikeaqehqqe
      361 arynldrste kfiln
//
LOCUS       WP_235181253             549 aa            linear   BCT 02-MAR-2025
DEFINITION  rhodanese-like domain-containing protein [Bordetella
            bronchiseptica].
ACCESSION   WP_235181253
VERSION     WP_235181253.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
REFERENCE   1  (residues 1 to 549)
  AUTHORS   Gliubich,F., Gazerro,M., Zanotti,G., Delbono,S., Bombieri,G. and
            Berni,R.
  TITLE     Active site structural features for chemically modified forms of
            rhodanese
  JOURNAL   J Biol Chem 271 (35), 21054-21061 (1996)
   PUBMED   8702871
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00581.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..549
                     /product="rhodanese-like domain-containing protein"
                     /calculated_mol_wt=58531
     Region          5..102
                     /region_name="PspE"
                     /note="Rhodanese-related sulfurtransferase [Inorganic ion
                     transport and metabolism]; COG0607"
                     /db_xref="CDD:440372"
     Region          118..224
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            189
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238089"
     Region          262..360
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            327
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238089"
     Region          390..485
                     /region_name="PspE"
                     /note="Rhodanese-related sulfurtransferase [Inorganic ion
                     transport and metabolism]; COG0607"
                     /db_xref="CDD:440372"
     Region          <459..>513
                     /region_name="SseA"
                     /note="3-mercaptopyruvate sulfurtransferase SseA, contains
                     two rhodanese domains [Inorganic ion transport and
                     metabolism]; COG2897"
                     /db_xref="CDD:442142"
ORIGIN      
        1 melstvselr dlratsdeya lfdvresaqa hqghifgatf lprrmlaari aslvprrstl
       61 ivlydeggpd prarlaaqtl arfgytgvrv ldgglrtwla qgeapcrgsn vpskwfgetv
      121 hahaatpalp iatlqawret gsahricdir speeygrari pgaagafgsd lawhaddlrr
      181 agqpvvvhcs grtrsiiace slrllgvqda yalengtmgw rlaglalerg pgsgslaasa
      241 asrrdgarrt qalaraagva sveaamlarw lderdagrtn lyvldirqva eyraghlpga
      301 ialpgglavq rtdeflpvra aqvvlvddde araalagywl ramglprvav lagglpawna
      361 agyalghgrg rprpadhada maarpcpahd vheagarmqr vyvdtqarfl agrpdaaewv
      421 pfggleawla arakrqdera vvlmahdesl arsaalnarl agfdaavlag gvtawqaqgl
      481 plasgpgggv tqaadvvvqp ydaglqamrd yleweqaltr qaiptlplyt ayrvprppaa
      541 dmeqdqeap
//
LOCUS       WP_235180775             685 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA-binding protein [Pseudomonas aeruginosa].
ACCESSION   WP_235180775
VERSION     WP_235180775.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 685)
  AUTHORS   Ilangovan,U., Wojciak,J.M., Connolly,K.M. and Clubb,R.T.
  TITLE     NMR structure and functional studies of the Mu repressor
            DNA-binding domain
  JOURNAL   Biochemistry 38 (26), 8367-8376 (1999)
   PUBMED   10387082
REFERENCE   2  (residues 1 to 685)
  AUTHORS   Harshey,R.M., Getzoff,E.D., Baldwin,D.L., Miller,J.L. and
            Chaconas,G.
  TITLE     Primary structure of phage mu transposase: homology to mu repressor
  JOURNAL   Proc Natl Acad Sci U S A 82 (22), 7676-7680 (1985)
   PUBMED   2999776
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014380.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02316.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..685
                     /product="DNA-binding protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=76906
     Region          3..121
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Region          <213..462
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
     Region          475..535
                     /region_name="Mu-transpos_C"
                     /note="Mu transposase, C-terminal; pfam09299"
                     /db_xref="CDD:430512"
ORIGIN      
        1 mptklaglpg lpttdrgvrk laeregwkkq khsgrgggye yhvsalpket raallnaalg
       61 evatkvvrqe tqlalvetnr qqlvadarqg vlhaldlmma rtgysrkrsi tlmldmarlg
      121 qvepqllaml kmardprgrp sadglpsvrs lerfldqaer galvpkvrrp dmsvpdwapa
      181 fmtiyqgpek rsaraahall ekhwqgqmps ldqvyaflrk vgnvsrevgr mgeheikalr
      241 pfirrdfskl lptdvyscdg htfdaevqhp mhgrpfrpei ttiidirtrr ipgwstglae
      301 salvvvdalr dactkggipa ifyvdngsgy vnhmmrdeav glmgrlgidm knslpynsqa
      361 rgviervhqs lwiraakelp gyigadmdrq aklatfkltr raiakggtmp lmswesfvaf
      421 ceqqiaeynd rphsslpriv dpntgrrrhm tpneawalhe aegfspmrvt ddearplfrp
      481 qvlrtvrrce lefignryfa releefhgdq vavgydihda skvwvydgeg rflctaelng
      541 nsrdympasy verarekrae arekralahl deiraerdgg yalemdapls ipglgtitpe
      601 qlrsrsaatl emqaeridep rpaaataqat taqvftlpta paqryrqwce laerqrsglp
      661 iepgaaqwfe vypkskefaa qqrqa
//
LOCUS       WP_235181388             175 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF443 family protein, partial [Staphylococcus aureus].
ACCESSION   WP_235181388
VERSION     WP_235181388.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016186.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04276.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>175
                     /product="DUF443 family protein"
     Region          11..>152
                     /region_name="DUF443"
                     /note="Protein of unknown function (DUF443); cl04467"
                     /db_xref="CDD:414061"
ORIGIN      
        1 mlceskiink npkyriikyn deylmidiis twislffpfi nwfipkryvk isreefenln
       61 ivkpakknvf wpvagistlf avtlrkythl ldtqldrklv iaiccitfig iltfyvrlik
      121 ksslniyntk nkrskiilip tlknfcltlf ryesspdscv kcytmflpfl likid
//
LOCUS       WP_235181497             862 aa            linear   BCT 02-MAR-2025
DEFINITION  HEAT repeat domain-containing protein [Limnospira platensis].
ACCESSION   WP_235181497
VERSION     WP_235181497.1
KEYWORDS    RefSeq.
SOURCE      Limnospira platensis
  ORGANISM  Limnospira platensis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Oscillatoriophycideae; Oscillatoriales; Sirenicapillariaceae;
            Limnospira.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025030.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13646.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Limnospira platensis"
                     /db_xref="taxon:118562"
     Protein         1..862
                     /product="HEAT repeat domain-containing protein"
                     /calculated_mol_wt=94266
     Region          196..221
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          212..359
                     /region_name="HEAT"
                     /note="HEAT repeat [General function prediction only];
                     COG1413"
                     /db_xref="CDD:441023"
     Region          230..255
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          263..291
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          296..327
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          314..461
                     /region_name="HEAT"
                     /note="HEAT repeat [General function prediction only];
                     COG1413"
                     /db_xref="CDD:441023"
     Region          334..357
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          436..459
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          450..597
                     /region_name="HEAT"
                     /note="HEAT repeat [General function prediction only];
                     COG1413"
                     /db_xref="CDD:441023"
     Region          468..494
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          501..530
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          570..662
                     /region_name="HEAT_2"
                     /note="HEAT repeats; pfam13646"
                     /db_xref="CDD:433376"
     Region          572..595
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          654..800
                     /region_name="HEAT"
                     /note="HEAT repeat [General function prediction only];
                     COG1413"
                     /db_xref="CDD:441023"
     Region          672..697
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          705..734
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          774..862
                     /region_name="HEAT_2"
                     /note="HEAT repeats; pfam13646"
                     /db_xref="CDD:433376"
     Region          776..799
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
ORIGIN      
        1 mprqrfrlsq alveehlgee sdqtswaylv lrlgwlnrvg rdgrgdsifa fyhatfqeyf
       61 aalavedwdy flprnhvdsp vagrryrife kqwkqvilcw lgrkdiqaqk kedliralve
      121 fedgvrdfye yktyllaaae inqfkacsla tdivrqvvkw gfgylntekq ewqtflepie
      181 eaarevipqt irplamsali eliencpekd srmqaaeslg kidpgnpdai avlveiirtt
      241 edkytryqaa eslgkigqvn pdaiavlvei irttedkytr yqaaeslgki gqvnpdaiav
      301 lveiirtted kytryqaaes lgkigqvnpd aiaglleiir ttedqdtrgl vayslgeigq
      361 gnpdaiagll eiirttedqd trglvayslg eigqgnpdai aglleiirtt edektrreav
      421 eslgkigqgn pdaiagllei irttedektr reaveslgki gqgnpdaiav lveiirtted
      481 kytryqaaes lgkigqgnpd aiaglleiir ttedqdtrgl vayslgeidp gnpdaiagll
      541 eiirttedqd trglvayslg eidpgnpdai aglleiirtt edektrreav eslgkigqgn
      601 pdaiagllei irttedqdtr glvayslgei dpgnpdaiag lleiirtted qdtrglvays
      661 lgeigqgnpd aiaglleiir ttedqdtrgl vayslgeigq gnpdaiagll eiirttedqd
      721 trglvayslg eigqgnpdai aglleiirtt edektrreav eslgkigqgn pdaiagllei
      781 irttedqdtr glvayslgei dpgnpdaiag lleiirtted qdtrglvays lgeigqgnpe
      841 aiaglleviq ntqdedtrrl aa
//
LOCUS       WP_235181542             383 aa            linear   BCT 02-MAR-2025
DEFINITION  YadA-like family protein [Pasteurella multocida].
ACCESSION   WP_235181542
VERSION     WP_235181542.1
KEYWORDS    RefSeq.
SOURCE      Pasteurella multocida
  ORGANISM  Pasteurella multocida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Pasteurella.
REFERENCE   1  (residues 1 to 383)
  AUTHORS   Sandt,C.H. and Hill,C.W.
  TITLE     Nonimmune binding of human immunoglobulin A (IgA) and IgG Fc by
            distinct sequence segments of the EibF cell surface protein of
            Escherichia coli
  JOURNAL   Infect Immun 69 (12), 7293-7303 (2001)
   PUBMED   11705900
REFERENCE   2  (residues 1 to 383)
  AUTHORS   Hoiczyk,E., Roggenkamp,A., Reichenbecher,M., Lupas,A. and
            Heesemann,J.
  TITLE     Structure and sequence analysis of Yersinia YadA and Moraxella
            UspAs reveal a novel class of adhesins
  JOURNAL   EMBO J 19 (22), 5989-5999 (2000)
   PUBMED   11080146
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015831.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03895.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Pasteurella multocida"
                     /db_xref="taxon:747"
     Protein         1..383
                     /product="YadA-like family protein"
                     /calculated_mol_wt=39161
     Region          <29..382
                     /region_name="Hia"
                     /note="Autotransporter adhesin [Intracellular trafficking,
                     secretion, and vesicular transport, Extracellular
                     structures]; COG5295"
                     /db_xref="CDD:444098"
     Region          325..383
                     /region_name="YadA_anchor"
                     /note="YadA-like membrane anchor domain; pfam03895"
                     /db_xref="CDD:427576"
ORIGIN      
        1 msptskdavn gsqlhsvket aeagwhltan gadssnvkpr ntvdlnntdg nivisktnta
       61 dshnvtfgla dninvkdsvv vgpkgadgkp gegavvinak dgangkdgis ivgkdgkdav
      121 aisgkdgvgt igltgpagad gknanaiigv kdsvkgldgn dgkdgnsktr ivytkpngee
      181 eqvatmndgl vfgadkgteh kaklgttvkv kgddkniete vagdtirarl kdnidvkgin
      241 vtenltvkeg akinmgnnvi dgvadgevsa tskqavngsq lhkvqqqvnn qatainklgd
      301 hinkvdkdlr agiagatava flqrpneagk sivslgvgsy rsesaiavgy arnsdnnkis
      361 iklgggmnsr gdvnfggsig yqw
//
LOCUS       WP_235181543              47 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GTP-binding protein, partial [Pasteurellaceae].
ACCESSION   WP_235181543
VERSION     WP_235181543.1
KEYWORDS    RefSeq.
SOURCE      Pasteurellaceae
  ORGANISM  Pasteurellaceae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales.
REFERENCE   1  (residues 1 to 47)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..47
                     /organism="Pasteurellaceae"
                     /db_xref="taxon:712"
     Protein         1..>47
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>47
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 mskekfertk phvnvgtigh vdhgkttlta aittvlakhy ggaaraf
//
LOCUS       WP_235181604             282 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-1,2-fucosyltransferase [Chlorogloeopsis fritschii].
ACCESSION   WP_235181604
VERSION     WP_235181604.1
KEYWORDS    RefSeq.
SOURCE      Chlorogloeopsis fritschii
  ORGANISM  Chlorogloeopsis fritschii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Chlorogloeopsidaceae; Chlorogloeopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013681.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01531.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Chlorogloeopsis fritschii"
                     /db_xref="taxon:1124"
     Protein         1..282
                     /product="alpha-1,2-fucosyltransferase"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0008107 - galactoside
                     2-alpha-L-fucosyltransferase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=33912
     Region          22..242
                     /region_name="O-FucT_like"
                     /note="GDP-fucose protein O-fucosyltransferase and related
                     proteins; cl16914"
                     /db_xref="CDD:450121"
ORIGIN      
        1 mennlivinp afedyaaffe gtsrdvlccy ptpqfsvfgn kllrnlyykv nrylvdskyf
       61 rvidvkrdkp fnwstfnlve klqpgkltff qgwlfrdgwf vaevdklrkh keairtyfqp
      121 lkkyqvnisk lisvvrqetd ivigihirhg dyrqhqdsry ffeveqyvkv mesaqalfpn
      181 qkvtflicsn eqqphhhfqk lsyvfgnnhi iedlyslaec dyiigppssy tmwasfyger
      241 plymirdvnk nidikdfvqf yewqgifhyh edwsksywew th
//
LOCUS       WP_235181613             331 aa            linear   BCT 02-MAR-2025
DEFINITION  D-Ala-D-Ala carboxypeptidase family metallohydrolase
            [Chlorogloeopsis fritschii].
ACCESSION   WP_235181613
VERSION     WP_235181613.1
KEYWORDS    RefSeq.
SOURCE      Chlorogloeopsis fritschii
  ORGANISM  Chlorogloeopsis fritschii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Chlorogloeopsidaceae; Chlorogloeopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019896.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08291.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Chlorogloeopsis fritschii"
                     /db_xref="taxon:1124"
     Protein         1..331
                     /product="D-Ala-D-Ala carboxypeptidase family
                     metallohydrolase"
                     /calculated_mol_wt=36894
     Region          100..>139
                     /region_name="PGRP"
                     /note="Peptidoglycan-binding (PGRP) domain of
                     peptidoglycan hydrolases [Cell wall/membrane/envelope
                     biogenesis]; COG3409"
                     /db_xref="CDD:442635"
     Region          207..320
                     /region_name="Peptidase_M15_3"
                     /note="Peptidase M15; pfam08291"
                     /db_xref="CDD:429903"
ORIGIN      
        1 mitdnlvsrs tivlivicdr miwkkleeky ppsqtevlvg ykeeavyqgf wrqkekpswq
       61 iyssvglvev kephywaeiq plplpittmk ypnleglnkt ikladadset ikeiqsllli
      121 gnfyngeidg iydnntvaaf akwkesiwlg speligekaa lslleiaenh iateehtvpt
      181 kptlidagsk tgrvlflptg etvfehefiv pgipltwgem tkgcdrvpet klvvgnivkt
      241 akafgkirdv fggpigitsg yrtekinrav ggainsqhvk glgldiypld snfsrlfqvc
      301 rssdaiglgr gmhrgfihvd wrdgirvefs y
//
LOCUS       WP_235181715             144 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6884 domain-containing protein [Sphingobium indicum].
ACCESSION   WP_235181715
VERSION     WP_235181715.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium indicum
  ORGANISM  Sphingobium indicum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF045163.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21818.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Sphingobium indicum"
                     /db_xref="taxon:332055"
     Protein         1..144
                     /product="DUF6884 domain-containing protein"
                     /calculated_mol_wt=15776
ORIGIN      
        1 mpainpapsp apvflvacva akldrpapar dlyaspwfrk arayverqeg qwfilsakhg
       61 liapetviap ydetlgamka sarrlwgvrv ieamadqida aaplivlagr hyrdplwpqi
      121 errasapmeg lgigqqlawl aqkw
//
LOCUS       WP_235181739             285 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: sulfotransferase domain-containing protein
            [Sphingobium].
ACCESSION   WP_235181739
VERSION     WP_235181739.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium
  ORGANISM  Sphingobium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae.
REFERENCE   1  (residues 1 to 285)
  AUTHORS   Kakuta,Y., Pedersen,L.G., Carter,C.W., Negishi,M. and Pedersen,L.C.
  TITLE     Crystal structure of estrogen sulphotransferase
  JOURNAL   Nat Struct Biol 4 (11), 904-908 (1997)
   PUBMED   9360604
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012888.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00685.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Sphingobium"
                     /db_xref="taxon:165695"
     Protein         1..285
                     /product="sulfotransferase domain-containing protein"
                     /GO_function="GO:0015016 - [heparan sulfate]-glucosamine
                     N-sulfotransferase activity [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=31693
     Region          31..265
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; cl21551"
                     /db_xref="CDD:473908"
ORIGIN      
        1 mmslkgvara mrrrlrdepp lrlaaarada flvsypksgr twlryllscy faesaklgfe
       61 pdltstfril pnfdrdpvrg idafigrtge aglplilvsh lpyrerlfld rpvlflvrdp
      121 rdvivsayfh atrhkksfsg dmaafldepk ygmaaliayl ngwaaglagr phhlisyehm
      181 laepmpavag ilaflgvepq pemlaravaa aqfdrmrdke rdggipghdy drnddqslrm
      241 rsgkagafge wlrpdqadlv lercrsdlsp ralallaatg vdlar
//
LOCUS       WP_235181773             165 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta, partial
            [Sphingobium indicum].
ACCESSION   WP_235181773
VERSION     WP_235181773.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium indicum
  ORGANISM  Sphingobium indicum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (residues 1 to 165)
  AUTHORS   Ahmad,S., Glavas,N.A. and Bragg,P.D.
  TITLE     A mutation at Gly314 of the beta subunit of the Escherichia coli
            pyridine nucleotide transhydrogenase abolishes activity and affects
            the NADP(H)-induced conformational change
  JOURNAL   Eur J Biochem 207 (2), 733-739 (1992)
   PUBMED   1633824
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02233.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Sphingobium indicum"
                     /db_xref="taxon:332055"
     Protein         1..>165
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
ORIGIN      
        1 megvnatlla gwslaallfa aallaplggg lrrgahlasa amtvaaavtl yshdvmalpq
       61 icaaliagsa vglalgrgvp rsalpsllgg fgglaglaav flagaawrdp hafglldemt
      121 drlrmeaaaa igaalacgam acagaaailr rgaawhsrrd istpq
//
LOCUS       WP_235181808             316 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: chromate resistance protein ChrB domain-containing
            protein [Sphingobium].
ACCESSION   WP_235181808
VERSION     WP_235181808.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium
  ORGANISM  Sphingobium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae.
REFERENCE   1  (residues 1 to 316)
  AUTHORS   Branco,R. and Morais,P.V.
  TITLE     Identification and characterization of the transcriptional
            regulator ChrB in the chromate resistance determinant of
            Ochrobactrum tritici 5bvl1
  JOURNAL   PLoS One 8 (11), e77987 (2013)
   PUBMED   24223748
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 316)
  AUTHORS   Juhnke,S., Peitzsch,N., Hubener,N., Grosse,C. and Nies,D.H.
  TITLE     New genes involved in chromate resistance in Ralstonia
            metallidurans strain CH34
  JOURNAL   Arch Microbiol 179 (1), 15-25 (2002)
   PUBMED   12471500
  REMARK    Erratum:[Arch Microbiol. 2004 May;181(5):390]
REFERENCE   3  (residues 1 to 316)
  AUTHORS   Nies,A., Nies,D.H. and Silver,S.
  TITLE     Nucleotide sequence and expression of a plasmid-encoded chromate
            resistance determinant from Alcaligenes eutrophus
  JOURNAL   J Biol Chem 265 (10), 5648-5653 (1990)
   PUBMED   2180932
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021357.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09828.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Sphingobium"
                     /db_xref="taxon:165695"
     Protein         1..316
                     /product="chromate resistance protein ChrB
                     domain-containing protein"
                     /calculated_mol_wt=35042
     Region          68..316
                     /region_name="ChrB1"
                     /note="Chromate resistance protein ChrB1 [Inorganic ion
                     transport and metabolism]; COG4275"
                     /db_xref="CDD:443416"
ORIGIN      
        1 mtdatpwlal lhqlpakppy lrvkiwrrlq sigavplkna vhvlphsqes aaafgslmae
       61 ivdnggeatl iearllagqs dadvralfda arredyeeia raarrlletg pasgtdiarl
      121 qkrledvgrl dffgaperrr aeaalaeldr qrhrhpdvsr aesaahaepi dladrtwvtr
      181 sgvhvdriac awlirrfidp qarfkfvdsr hyqpgegelr fdmadaefth egdrcsfetl
      241 llradllddp alvaigeiih dldigdgrfg rpetsglgai lsgvcastdd dlqriamasd
      301 alnqfhaffs nrrtdr
//
LOCUS       WP_235181857             187 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: prepilin-type N-terminal cleavage/methylation
            domain-containing protein [Exiguobacterium].
ACCESSION   WP_235181857
VERSION     WP_235181857.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium
  ORGANISM  Exiguobacterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019575.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07963.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Exiguobacterium"
                     /db_xref="taxon:33986"
     Protein         1..187
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /calculated_mol_wt=20660
ORIGIN      
        1 mrhcanrslk rlsrqltemk kredgftlve llvtvvvasi lsgviitafi tgtlgfqmtn
       61 etselrsead yliasvlsdv nrtefdavte vggtfqfyrl sapgiseagm iyreagyvpt
      121 dlvlsedsft psnpqitver ltiqlkdpvf dprrptymtg glieiemdlt qtndsdsvtt
      181 fessipf
//
LOCUS       WP_235181871             518 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Exiguobacterium
            marinum].
ACCESSION   WP_235181871
VERSION     WP_235181871.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium marinum
  ORGANISM  Exiguobacterium marinum
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis; Exiguobacterium.
REFERENCE   1  (residues 1 to 518)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 518)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 518)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 518)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 518)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 518)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 518)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 518)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 518)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Exiguobacterium marinum"
                     /db_xref="taxon:273528"
     Protein         1..518
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=59771
     Region          153..>515
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mfiylavyll psfllgflal dvfqrnpnkv ehrllslfvf gysmlflaef vrhlspieys
       61 palitywfgn agilififsi hfilnitgvg akaprwlypw vvylplipiv ltyvqrenit
      121 nsqrfeqvgi wiypefnssy lvtltvgnif htliiflify alrrterreh qrvlrmlfwt
      181 alvilvwdiv fgyfqfrgfi ppysymyggl vwavalviam nrldfltsyv krygtlynln
      241 psaillidpd grvesanpaa rtlfhtvrvv nerfvdllpe kkkaewmehy tkhfrtrkkf
      301 iefetkimtk sgqeryvvid gdfvdidrti hgmiiirdvh sfkeaeqtir ffayhdpltk
      361 lanrrafyeq adhallsasr lsllvidldg fkavndtygh qigdhflthl gglleasard
      421 vglasrvggd efyiylvdlt dsevlafihe lqltlnqnpy qtsdvtipir asigvshapd
      481 qgtdldtlih kadqamyqik qdgkndyavy dealhgpt
//
LOCUS       WP_235181905             510 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Bordetella bronchiseptica].
ACCESSION   WP_235181905
VERSION     WP_235181905.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
REFERENCE   1  (residues 1 to 510)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..510
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=55031
     Region          9..509
                     /region_name="YjcC"
                     /note="Redox-sensing c-di-GMP phosphodiesterase, contains
                     CSS-motif and EAL domains [Signal transduction
                     mechanisms]; COG4943"
                     /db_xref="CDD:443970"
ORIGIN      
        1 mtirylpvrh rllffvvpvl acglvaaaig yawkgmhaas tvehdnahfl arsldiareq
       61 ldivlesgvt paacseadla alrqrvfrsk yvadiariad galrcsavwg vwrhphvlpr
      121 ggrivrdgvl lwqnmenpiq pelsgdvlas erlavftipg ifddivrrag gqkttlysrk
      181 qghvykefga paaggaepap gaagwfqlvr taaacapvgg pdicvettar vdargaaava
      241 glggmalgag vglvvflwwr rsfglraslv dalrkgkiev ayqplrvlds grmagveala
      301 rwthdevgai spitflgwve amglrqpftr yivqaaldgm ktrmagdasf ylsinvfped
      361 ledesfldfl tqsvrerglg pgsvvlevte savfstasps alfrrfraag friflddfgv
      421 gysnlgniir wavdgikldr ifmqslgdfd saapvldqvi eiarqldlhl viegievqsq
      481 adyifkraph avgqgwlfgr pgpasalpaa
//
LOCUS       WP_235181921             167 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MauE/DoxX family redox-associated membrane protein
            [Dermacoccus].
ACCESSION   WP_235181921
VERSION     WP_235181921.1
KEYWORDS    RefSeq.
SOURCE      Dermacoccus
  ORGANISM  Dermacoccus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Dermacoccaceae.
REFERENCE   1  (residues 1 to 167)
  AUTHORS   van der Palen,C.J., Reijnders,W.N., de Vries,S., Duine,J.A. and van
            Spanning,R.J.
  TITLE     MauE and MauD proteins are essential in methylamine metabolism of
            Paracoccus denitrificans
  JOURNAL   Antonie Van Leeuwenhoek 72 (3), 219-228 (1997)
   PUBMED   9403107
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018942.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07291.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Dermacoccus"
                     /db_xref="taxon:57495"
     Protein         1..167
                     /product="MauE/DoxX family redox-associated membrane
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0030416 - methylamine metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=17811
     Region          21..>124
                     /region_name="DoxX"
                     /note="cl21527"
                     /db_xref="CDD:451291"
ORIGIN      
        1 mstsmdtstt kptaersnrw pwialvlrlv lagvflyagl pklthldasr rsvraydlfs
       61 ydvanvigti lplaevalgv illvglfarf aaiisalllv ifiagiasaw argisidcgc
      121 fseggavaas qtkypqeigr divflilagl lawrprsrfs adgalwg
//
LOCUS       WP_235181966             161 aa            linear   BCT 02-MAR-2025
DEFINITION  type 1 glutamine amidotransferase domain-containing protein
            [Dermacoccus nishinomiyaensis].
ACCESSION   WP_235181966
VERSION     WP_235181966.1
KEYWORDS    RefSeq.
SOURCE      Dermacoccus nishinomiyaensis
  ORGANISM  Dermacoccus nishinomiyaensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Dermacoccaceae; Dermacoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028434.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17124.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Dermacoccus nishinomiyaensis"
                     /db_xref="taxon:1274"
     Protein         1..161
                     /product="type 1 glutamine amidotransferase
                     domain-containing protein"
                     /calculated_mol_wt=17190
     Region          4..>141
                     /region_name="GAT_1"
                     /note="Type 1 glutamine amidotransferase (GATase1)-like
                     domain; cl00020"
                     /db_xref="CDD:469582"
     Site            139
                     /site_type="active"
                     /note="conserved cys residue [active]"
                     /db_xref="CDD:153235"
ORIGIN      
        1 mtkvlfvvta atgwtlkdgs vhptgywaee laephrlfre agwgttiatp ggvaptldel
       61 slgvaggmpk rrkeirayld sikqeldhpl aldtvdesdy dlvfypgghg pmedlavdpv
      121 sgtllvrrld sgqplallch arppssppra ttvpthssva r
//
LOCUS       WP_235182005             138 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF2530 domain-containing protein [Dermacoccus].
ACCESSION   WP_235182005
VERSION     WP_235182005.1
KEYWORDS    RefSeq.
SOURCE      Dermacoccus
  ORGANISM  Dermacoccus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Dermacoccaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022205.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10745.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Dermacoccus"
                     /db_xref="taxon:57495"
     Protein         1..138
                     /product="DUF2530 domain-containing protein"
                     /calculated_mol_wt=15096
ORIGIN      
        1 mspdqrqpkr apradgatpr sieraremre raehsmsyea gvvlpaegea rleespyekl
       61 ftggdtvipk pqplhvdtpk vilvgvacwv vmlvvtllvp alhtgerdww pwtcvagavl
      121 glmgwayvrr grgnaeaa
//
LOCUS       WP_235182061             507 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: aldehyde dehydrogenase family protein [Dermacoccus].
ACCESSION   WP_235182061
VERSION     WP_235182061.1
KEYWORDS    RefSeq.
SOURCE      Dermacoccus
  ORGANISM  Dermacoccus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Dermacoccaceae.
REFERENCE   1  (residues 1 to 507)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Dermacoccus"
                     /db_xref="taxon:57495"
     Protein         1..507
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=53591
     Region          51..500
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     Site            order(176..180,188,203,205..206,254..257,260,263..264,
                     278..280,311,409,411,437,475)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143395"
     Site            order(180,278,308,311)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143395"
ORIGIN      
        1 mritapanla rsvmvtapqp ekitvegvev dtrhwigger vtsadgatft dvspidesvi
       61 geisagaeae vdaavaaark afpawagmpv aeraallrkv adgvearvee lahvetrdng
      121 allrshlrgv mprvamnfrf fadylendla hpdmtvpgrg hreritydpa gvvaiitpwn
      181 aplmlatwri gpalaagntv vvkppewapl taslladimr daglpdgvfn vvqgtgvdag
      241 apltrhpgin rlcftgsvpt agviaaaaap nivplsfelg gkspllvldd admdlavdia
      301 veqfdnagqv clkgarllvd akiaeeftqr vldkartlkq gdprdltsdv salitrkhfd
      361 tvdgfvqrak adgarvlmgg gpndelgglf ysptiladcp egseilteev fgpvltietf
      421 dgdeagvama ndtrfglaat lvtsdperae rvsaqlragt vwvncffvrd lgapfggsgr
      481 sgigreggiw sfdfycdvkn svfapsn
//
LOCUS       WP_235182094             397 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Oenococcus oeni].
ACCESSION   WP_235182094
VERSION     WP_235182094.1
KEYWORDS    RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Oenococcus oeni"
                     /db_xref="taxon:1247"
     Protein         1..397
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=43942
     Region          6..389
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(50..51,53..55,58,78,81..82,85,209,212..213,216..218,
                     221,249,253,305..306,310,314,330,333..334,337..338,341)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:341046"
ORIGIN      
        1 mkkdlflkrf ifkkiffwag llfiigvics alapnflill igrliqalst glaipllite
       61 imqqipqkkq gsymgiggmv ialasslgpt yggvitqdls wrlifrfvlp idliawligl
      121 sfieqkssps kipfawkqfi slilallsit vavnnagiyg wtsikfygfl liavillivf
      181 iklstnsrqa lisisifkkw efvcplliyf liqfiqlslt fllpnyaqli lkkgvtisgi
      241 mllcgslisa ilqpltgrml dsfsvkiplv igafflitst isftifqryl svfliaalyv
      301 iymigfsfvf nnsltyalqk lplklisdgn avfntlqqya gslgtsvasa llangigtdg
      361 kqsnytgsrh ifilnfisca ivvilifsiq rkknkyn
//
LOCUS       WP_235182307             334 aa            linear   BCT 02-MAR-2025
DEFINITION  POTRA domain-containing protein [Fischerella thermalis].
ACCESSION   WP_235182307
VERSION     WP_235182307.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 334)
  AUTHORS   Sanchez-Pulido,L., Devos,D., Genevrois,S., Vicente,M. and
            Valencia,A.
  TITLE     POTRA: a conserved domain in the FtsQ family and a class of
            beta-barrel outer membrane proteins
  JOURNAL   Trends Biochem Sci 28 (10), 523-526 (2003)
   PUBMED   14559180
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08479.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..334
                     /product="POTRA domain-containing protein"
                     /calculated_mol_wt=37010
     Region          40..>299
                     /region_name="FhaC"
                     /note="Hemolysin activation/secretion protein
                     [Intracellular trafficking, secretion, and vesicular
                     transport]; COG2831"
                     /db_xref="CDD:442079"
ORIGIN      
        1 mgiwerkdik iqgqkfssst tlsllsllpl lplipllsnt ssawgqpinp vtptpeqpsp
       61 tplpplekpl qvppttpltp eelqnvpgti vvqkyefigs tvfsqqeleq atadfvgkpi
      121 tfaellqaan qvtqlylqqg yitsgayips qeiqlgivki qvlegsvedi kvnivkgrlh
      181 pnyvrdriav agyeplninr lqealqllql nprierlnae ltagtkpgtn slevtvvsad
      241 tfntrlildn hrnpsigsfe rgidiseasl lglgdeftfg yrntdgrkif rslglgysln
      301 rysqfagrhl arkrhvfsir iqtilkrrqr sqsp
//
LOCUS       WP_235182335              22 aa            linear   BCT 02-MAR-2025
DEFINITION  SAV1978 family virulence-associated passenger protein, partial
            [Staphylococcus aureus].
ACCESSION   WP_235182335
VERSION     WP_235182335.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 22)
  AUTHORS   Bae,T., Baba,T., Hiramatsu,K. and Schneewind,O.
  TITLE     Prophages of Staphylococcus aureus Newman and their contribution to
            virulence
  JOURNAL   Mol Microbiol 62 (4), 1035-1047 (2006)
   PUBMED   17078814
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017956.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06194.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..22
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..22
                     /product="SAV1978 family virulence-associated passenger
                     protein"
ORIGIN      
        1 eleiyikqhg leyeeqkqlt lf
//
LOCUS       WP_235182397             156 aa            linear   BCT 02-MAR-2025
DEFINITION  PRD domain-containing protein [Lactococcus cremoris].
ACCESSION   WP_235182397
VERSION     WP_235182397.1
KEYWORDS    RefSeq.
SOURCE      Lactococcus cremoris
  ORGANISM  Lactococcus cremoris
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Lactococcus.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Graille,M., Zhou,C.Z., Receveur-Brechot,V., Collinet,B.,
            Declerck,N. and van Tilbeurgh,H.
  TITLE     Activation of the LicT transcriptional antiterminator involves a
            domain swing/lock mechanism provoking massive structural changes
  JOURNAL   J Biol Chem 280 (15), 14780-14789 (2005)
   PUBMED   15699035
REFERENCE   2  (residues 1 to 156)
  AUTHORS   Declerck,N., Dutartre,H., Receveur,V., Dubois,V., Royer,C.,
            Aymerich,S. and van Tilbeurgh,H.
  TITLE     Dimer stabilization upon activation of the transcriptional
            antiterminator LicT
  JOURNAL   J Mol Biol 314 (4), 671-681 (2001)
   PUBMED   11733988
REFERENCE   3  (residues 1 to 156)
  AUTHORS   van Tilbeurgh,H. and Declerck,N.
  TITLE     Structural insights into the regulation of bacterial signalling
            proteins containing PRDs
  JOURNAL   Curr Opin Struct Biol 11 (6), 685-693 (2001)
   PUBMED   11751049
REFERENCE   4  (residues 1 to 156)
  AUTHORS   van Tilbeurgh,H., Le Coq,D. and Declerck,N.
  TITLE     Crystal structure of an activated form of the PTS regulation domain
            from the LicT transcriptional antiterminator
  JOURNAL   EMBO J 20 (14), 3789-3799 (2001)
   PUBMED   11447120
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013070.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00874.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Lactococcus cremoris"
                     /db_xref="taxon:1359"
     Protein         1..156
                     /product="PRD domain-containing protein"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=18097
     Region          <3..>156
                     /region_name="BglG"
                     /note="Transcriptional antiterminator [Transcription];
                     COG3711"
                     /db_xref="CDD:442925"
ORIGIN      
        1 mfpeefalcl etlqkvkekl nislpedeag flamhivngt lgsgheyate ltklmeeilt
       61 tlkytlqvnf neqdiyfqrf ithlkffter ilsntksdes tdedlfllit gkyprayigt
      121 kkvseflkqt rsyevsqneq iymtvhlari lekiqd
//
LOCUS       WP_235182506             956 aa            linear   BCT 02-MAR-2025
DEFINITION  bacterial Ig-like domain-containing protein [Lactococcus cremoris].
ACCESSION   WP_235182506
VERSION     WP_235182506.1
KEYWORDS    RefSeq.
SOURCE      Lactococcus cremoris
  ORGANISM  Lactococcus cremoris
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Lactococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019161.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07523.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..956
                     /organism="Lactococcus cremoris"
                     /db_xref="taxon:1359"
     Protein         1..956
                     /product="bacterial Ig-like domain-containing protein"
                     /calculated_mol_wt=105228
     Region          <167..411
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          171..271
                     /region_name="DUF285"
                     /note="Mycoplasma protein of unknown function, DUF285;
                     pfam03382"
                     /db_xref="CDD:427272"
     Region          209..234
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          235..260
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          261..286
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          287..319
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          402..462
                     /region_name="MucBP"
                     /note="MucBP domain; pfam06458"
                     /db_xref="CDD:461917"
     Region          471..535
                     /region_name="Big_3"
                     /note="Bacterial Ig-like domain (group 3); pfam07523"
                     /db_xref="CDD:400072"
     Region          665..731
                     /region_name="Big_3"
                     /note="Bacterial Ig-like domain (group 3); pfam07523"
                     /db_xref="CDD:400072"
     Region          739..805
                     /region_name="Big_3"
                     /note="Bacterial Ig-like domain (group 3); pfam07523"
                     /db_xref="CDD:400072"
     Region          813..879
                     /region_name="Big_3"
                     /note="Bacterial Ig-like domain (group 3); pfam07523"
                     /db_xref="CDD:400072"
ORIGIN      
        1 mkkitcgfvl stmllgtlsp tirvisetss vitketstie ssestnnllp qssplsttyn
       61 stisdsttne nqvlhqsked tqkellttta qaqrdtstls eesitsddia sgsfgtsawr
      121 idsngtlyig agefsdtpln pngstssspw fqwrsqiksi hldgpiiasd slnnlfdyls
      181 nvtdiegieq ldtskttkmq rvfggcsslt sldltswdvs kvvdifslfn gatnmqslnv
      241 snwdtssmtn ityafstmsk lknldlsrwr vtplnatqgv fmgdssleel dltgfdmtkl
      301 psssynkyvm tlffqntnsl kslklsdkfr iwgtddtnve lpeilpnney sgkwenigsg
      361 tnenpngkdv wtskeltqnf nlnpkndtyv wqpisnkaad ltvkyldtng nkisadvvks
      421 gdigdpytte qksiagyvfk nvqgnvtgtl tdqtqtvtyi ykvdqstlni kdstiytgdk
      481 wkpqdnfvsa tdvdgndldf sqvtvdasni dtnkegtyev iysyggltqk akitvklnqt
      541 nvesaninpi tsqdvvitgt lpaygetntg qkieliyssa amfslnnkvy nqntvsgnqm
      601 fnysitrlnk dyytftftlp ngevfasgdk ldwfiipatl ptgspqlsqk lsteitvgel
      661 kavvnvhnss iyvgdtwkae dnfdsaldkd gnkvdfsqmt vddskvditt tgvyditytf
      721 dgvtsnakvs vkdrqtavnv hdstlyvgdt wkaeenfdsa fdkdghkvdf sqltvddskl
      781 dlntpgiydv tytydgmast akvsvknrqt ainvhdssiy vgdnwkaeen fdsafdkdgh
      841 kvdfsqltvd dskvhtskas vydvsytydg vtsitkvtvk dkestilpse ddknkekase
      901 kndekitiek iqsenpasen qlpetgesql sliatmvtgl aillisvlma kkqvkk
//
LOCUS       WP_235182556             126 aa            linear   BCT 02-MAR-2025
DEFINITION  YqhR family membrane protein [Gracilibacillus boraciitolerans].
ACCESSION   WP_235182556
VERSION     WP_235182556.1
KEYWORDS    RefSeq.
SOURCE      Gracilibacillus boraciitolerans
  ORGANISM  Gracilibacillus boraciitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Gracilibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022536.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11085.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Gracilibacillus boraciitolerans"
                     /db_xref="taxon:307521"
     Protein         1..126
                     /product="YqhR family membrane protein"
                     /calculated_mol_wt=14660
     Region          <4..118
                     /region_name="YqhR"
                     /note="Conserved membrane protein YqhR; pfam11085"
                     /db_xref="CDD:314111"
ORIGIN      
        1 mtgyfnftti tpksfvlrsw lhtewsdrwm gqilsilvis llsigiacly ylllkkydgv
       61 mpgiivgiii wfilfwlmep ifpnipefyr ldgntivtti clfilysvfi sysisfaylq
      121 hidkkq
//
LOCUS       WP_235182584             433 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Gracilibacillus
            boraciitolerans].
ACCESSION   WP_235182584
VERSION     WP_235182584.1
KEYWORDS    RefSeq.
SOURCE      Gracilibacillus boraciitolerans
  ORGANISM  Gracilibacillus boraciitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Gracilibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Gracilibacillus boraciitolerans"
                     /db_xref="taxon:307521"
     Protein         1..433
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=49872
     Region          2..420
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 memygpylel mkrddgniyi ipsgashgfv kpanleqggw wikrdvlrel dypqpktldd
       61 yfdiieeytv anpqidggan tigftalthd wrffalsnqp nhlagypndg gvmvdletld
      121 vnvygnkpet erwlkklnev naaglfdqea ftqnydeyla kitsgrvvgf fdyrwqvgqa
      181 ldtlyqdenf yndymafpvv feegikdqyl dpvgfaaspg mgitagtsee dqvriikyld
      241 hiakeetqkl itwggieget yeveddgryy rteeqivetr ntefrdefgf syfewgwprm
      301 nglyadgnav eppkqpevat mmydegdkef leaygietft elfsepderp wfpawdtpie
      361 tgtpaqlyeq qlddlmkrky peiifadpge fdtlweaylg efeglpyeey eqviqesver
      421 kveiaeksae aae
//
LOCUS       WP_235182603             233 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Gracilibacillus
            boraciitolerans].
ACCESSION   WP_235182603
VERSION     WP_235182603.1
KEYWORDS    RefSeq.
SOURCE      Gracilibacillus boraciitolerans
  ORGANISM  Gracilibacillus boraciitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Gracilibacillus.
REFERENCE   1  (residues 1 to 233)
  AUTHORS   Swint-Kruse,L. and Matthews,K.S.
  TITLE     Allostery in the LacI/GalR family: variations on a theme
  JOURNAL   Curr Opin Microbiol 12 (2), 129-137 (2009)
   PUBMED   19269243
REFERENCE   2  (residues 1 to 233)
  AUTHORS   Fukami-Kobayashi,K., Tateno,Y. and Nishikawa,K.
  TITLE     Parallel evolution of ligand specificity between LacI/GalR family
            repressors and periplasmic sugar-binding proteins
  JOURNAL   Mol Biol Evol 20 (2), 267-277 (2003)
   PUBMED   12598694
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13377.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Gracilibacillus boraciitolerans"
                     /db_xref="taxon:307521"
     Protein         1..233
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=25836
     Region          10..226
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 milsvdeent amdtfkkfqv dgmivfaess htisqgnipl vaygvsrktn vnypiidanh
       61 eksmeiavth lydfghrdia yvglldteda lqiekvegyq kamkklklkt rtfdtgglnw
      121 fdgyravdnl lsdnkrptai iggsydisgg ilralqekni eipkdislvs ydnipqmetm
      181 evpmtcigvp vdelaeeivd aiierievde eielvkkltp sltvrqsagp spk
//
LOCUS       WP_235182637             426 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Gracilibacillus boraciitolerans].
ACCESSION   WP_235182637
VERSION     WP_235182637.1
KEYWORDS    RefSeq.
SOURCE      Gracilibacillus boraciitolerans
  ORGANISM  Gracilibacillus boraciitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Gracilibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Gracilibacillus boraciitolerans"
                     /db_xref="taxon:307521"
     Protein         1..426
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=50239
     Region          15..420
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mkrvgmfvwn hftndarvmr egtslaqngy dveliciddp ddpnvkqyee inehfrvyrm
       61 krypslllfm qdsyrfvvgk rwplvplaii waflvyifpw vilpltviai lllktkvrvl
      121 wirgslilrm iwkghrgnyd iyhsndlntm pqgyisakwr inkkpliyds hevqtsrtgy
      181 dspwyekfer ffiqrmdamm venatrakyn edlygfypyv lhnypteeis iekekadlha
      241 ildlpkdeki llyqggiqmg rgleniieaf pqfkegtlvf igdgkikekl kqmvkernle
      301 dkikfipkvp lkelpkytkn gylgfqvlnn vcfnhysass nklfeymmae vpvvacdfpe
      361 ikkvvdenqi gvtidphlpd qiakgvnyll enpdkreafs kncisarkqy nwereqhkll
      421 elyqqf
//
LOCUS       WP_235182665             191 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Gracilibacillus boraciitolerans].
ACCESSION   WP_235182665
VERSION     WP_235182665.1
KEYWORDS    RefSeq.
SOURCE      Gracilibacillus boraciitolerans
  ORGANISM  Gracilibacillus boraciitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Gracilibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Gracilibacillus boraciitolerans"
                     /db_xref="taxon:307521"
     Protein         1..191
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=21293
     Region          <3..179
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mkysikerfi ltyagrlape knvellaeia nnlptalqdn ihwiiigdgp skmslqqkcn
       61 qnvtftgflp qrevakliav sdlfvfpset etfgnvvlea laagtpvvaa raggvqdiiq
      121 qdftgwlcea nnstsfiqai esilgnvewr hqlaenairy aqkqrwedrf ndlseayqai
      181 ideikkqqkp a
//
LOCUS       WP_235182722             237 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-dependent oxidoreductase [Gracilibacillus boraciitolerans].
ACCESSION   WP_235182722
VERSION     WP_235182722.1
KEYWORDS    RefSeq.
SOURCE      Gracilibacillus boraciitolerans
  ORGANISM  Gracilibacillus boraciitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Gracilibacillus.
REFERENCE   1  (residues 1 to 237)
  AUTHORS   Dengler,U., Niefind,K., Kiess,M. and Schomburg,D.
  TITLE     Crystal structure of a ternary complex of D-2-hydroxyisocaproate
            dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate
            at 1.9 A resolution
  JOURNAL   J Mol Biol 267 (3), 640-660 (1997)
   PUBMED   9126843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02826.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Gracilibacillus boraciitolerans"
                     /db_xref="taxon:307521"
     Protein         1..237
                     /product="NAD(P)-dependent oxidoreductase"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
                     /calculated_mol_wt=26777
     Region          <1..237
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(67..69,71,90..92,122..123,149)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:240631"
ORIGIN      
        1 mhdnkwpedv iltrmicsfg eriseyclsy ilkdlqshdq fqalqshkew qsitpkmlse
       61 skiliygtge igqkiaqais ffggvnvygv slsgkqkdff kkvfslddhy plleemdfii
      121 ntlpltsdte nmlnkdifsy lsdavlinvg rggkslsegd lihaikngki rlavldvlae
      181 eplpkyhelw nhpqviitph isavttaeea vesfvdtlsr ieknqplynr vdiekgy
//
LOCUS       WP_235182753             153 aa            linear   BCT 02-MAR-2025
DEFINITION  BMP family ABC transporter substrate-binding protein
            [Gracilibacillus boraciitolerans].
ACCESSION   WP_235182753
VERSION     WP_235182753.1
KEYWORDS    RefSeq.
SOURCE      Gracilibacillus boraciitolerans
  ORGANISM  Gracilibacillus boraciitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Gracilibacillus.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Deka,R.K., Brautigam,C.A., Biddy,B.A., Liu,W.Z. and Norgard,M.V.
  TITLE     Evidence for an ABC-type riboflavin transporter system in
            pathogenic spirochetes
  JOURNAL   mBio 4 (1), e00615-e00612 (2013)
   PUBMED   23404400
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 153)
  AUTHORS   Prabhu,Y., Muller,R., Anjard,C. and Noegel,A.A.
  TITLE     GrlJ, a Dictyostelium GABAB-like receptor with roles in
            post-aggregation development
  JOURNAL   BMC Dev Biol 7, 44 (2007)
   PUBMED   17501984
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 153)
  AUTHORS   Deka,R.K., Brautigam,C.A., Yang,X.F., Blevins,J.S., Machius,M.,
            Tomchick,D.R. and Norgard,M.V.
  TITLE     The PnrA (Tp0319; TmpC) lipoprotein represents a new family of
            bacterial purine nucleoside receptor encoded within an ATP-binding
            cassette (ABC)-like operon in Treponema pallidum
  JOURNAL   J Biol Chem 281 (12), 8072-8081 (2006)
   PUBMED   16418175
REFERENCE   4  (residues 1 to 153)
  AUTHORS   Roessler,D., Hauser,U. and Wilske,B.
  TITLE     Heterogeneity of BmpA (P39) among European isolates of Borrelia
            burgdorferi sensu lato and influence of interspecies variability on
            serodiagnosis
  JOURNAL   J Clin Microbiol 35 (11), 2752-2758 (1997)
   PUBMED   9350727
REFERENCE   5  (residues 1 to 153)
  AUTHORS   Ogura,M., Ohshiro,Y., Hirao,S. and Tanaka,T.
  TITLE     A new Bacillus subtilis gene, med, encodes a positive regulator of
            comK
  JOURNAL   J Bacteriol 179 (20), 6244-6253 (1997)
   PUBMED   9335269
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014647.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02608.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Gracilibacillus boraciitolerans"
                     /db_xref="taxon:307521"
     Protein         1..153
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /GO_component="GO:0005886 - plasma membrane [Evidence
                     IEA]"
                     /calculated_mol_wt=17045
     Region          37..>150
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mkkqmsmlim iflifsnalf lltgcqtnas vekiesvgml iehtihdqtw gnkgyrglld
       61 iqeefnvdvy fregvqtqqq vniaveefan kgvqviighs stygeyfnqi qdsypdiffi
      121 yvnggysaqn lislnfnsla mgffagmvag gnd
//
LOCUS       WP_235182760             394 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase family protein [Gracilibacillus
            boraciitolerans].
ACCESSION   WP_235182760
VERSION     WP_235182760.1
KEYWORDS    RefSeq.
SOURCE      Gracilibacillus boraciitolerans
  ORGANISM  Gracilibacillus boraciitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Gracilibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04851.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Gracilibacillus boraciitolerans"
                     /db_xref="taxon:307521"
     Protein         1..394
                     /product="DEAD/DEAH box helicase family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=45491
     Region          2..>373
                     /region_name="ResIII"
                     /note="Type III restriction endonuclease [Defense
                     mechanisms]; COG3421"
                     /db_xref="CDD:442647"
ORIGIN      
        1 matvqrvaad iytqkenamg kedyarnkvv ilgdeahhys astksekeae qswekaisti
       61 lnankdnrll eftatidlen knvyekykdk vlyryaldrf iqdkysknvk riqssntdld
      121 hmmnvvllse yrrryaleeh gtyikpvimf ksqridasne aheqfnelid tltaeslkaf
      181 lnrqaqitse ddsetltfah eyyrereddl seivrdikre lapsriinan dtsqsgilek
      241 ghyealnsle spmnlyrvif avarltegwd vlnlfdivrl sddpkvkgtk attmseaqli
      301 grgaryypfl ldgersytrr fnddskesli letihyhtin epqylknlvs aldemnlptg
      361 edkknplidv kvklhlngrt ygnmakfitm kplk
//
LOCUS       WP_235182830             544 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Gracilibacillus boraciitolerans].
ACCESSION   WP_235182830
VERSION     WP_235182830.1
KEYWORDS    RefSeq.
SOURCE      Gracilibacillus boraciitolerans
  ORGANISM  Gracilibacillus boraciitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Gracilibacillus.
REFERENCE   1  (residues 1 to 544)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Gracilibacillus boraciitolerans"
                     /db_xref="taxon:307521"
     Protein         1..544
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=63229
     Region          4..124
                     /region_name="REC_YesN-like"
                     /note="phosphoacceptor receiver (REC) domain of YesN and
                     related helix-turn-helix containing response regulators;
                     cd17536"
                     /db_xref="CDD:381091"
     Site            order(9..12,15..17,20,106..107)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381091"
     Region          172..291
                     /region_name="GGDEF_2"
                     /note="GGDEF-like domain; pfam17853"
                     /db_xref="CDD:465533"
     Region          436..514
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
ORIGIN      
        1 mikvmlvdde piereglkmi lsknrsnyqi vadaqngkea vefafthkpd lifmdikipe
       61 fdgiaaikki tpklpdtkfi ivsafdtfdy arqamkfgik eyllkpskis evleafdrvv
      121 deietkkqei ikrkqinhrl esvssfveme yivsfmmdhv hefnqkewde wldldhkqgf
      181 vsvfsfesdk khpsreeksr wyqilkrsfq qqnstslvgp ltggfqvpvl tlfsdnqeln
      241 remrgnivra iihqiqnkle dchvtvgvgr svadvnlfsd syneaiyale lvynhpsasy
      301 mvysdqlkqk raqlvpfeve rellttikkg diqkgmqmfe syfssiqqas dfrvsviqka
      361 medffivltr amkelgynen iqtnlgqfdt siqikevska ylimiierie ewrsngiqsi
      421 llqaknymdk yydssislgd vaqkvgissy ylsklfkdtf qitfidyltn trlqkakell
      481 ldqdislkei aimigykdpp nyfsrylkkq teltlvnigq nivnektdes ktlkrnrkin
      541 qehn
//
LOCUS       WP_235182796              82 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-glucosidase C-terminal domain-containing protein
            [Gracilibacillus boraciitolerans].
ACCESSION   WP_235182796
VERSION     WP_235182796.1
KEYWORDS    RefSeq.
SOURCE      Gracilibacillus boraciitolerans
  ORGANISM  Gracilibacillus boraciitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Gracilibacillus.
REFERENCE   1  (residues 1 to 82)
  AUTHORS   Kim,J.S., Cha,S.S., Kim,H.J., Kim,T.J., Ha,N.C., Oh,S.T., Cho,H.S.,
            Cho,M.J., Kim,M.J., Lee,H.S., Kim,J.W., Choi,K.Y., Park,K.H. and
            Oh,B.H.
  TITLE     Crystal structure of a maltogenic amylase provides insights into a
            catalytic versatility
  JOURNAL   J Biol Chem 274 (37), 26279-26286 (1999)
   PUBMED   10473583
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027968.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16657.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Gracilibacillus boraciitolerans"
                     /db_xref="taxon:307521"
     Protein         1..82
                     /product="alpha-glucosidase C-terminal domain-containing
                     protein"
                     /calculated_mol_wt=9412
     Region          2..70
                     /region_name="Malt_amylase_C"
                     /note="Maltogenic Amylase, C-terminal domain; cl02706"
                     /db_xref="CDD:445893"
ORIGIN      
        1 mlnsensiis yerkfeqssf miilnfaddd aeyntrdlve keiehvyssq rfemeegsvl
       61 nsfrllpyea ivikmnkggp la
//
LOCUS       WP_235182876             191 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Gracilibacillus
            boraciitolerans].
ACCESSION   WP_235182876
VERSION     WP_235182876.1
KEYWORDS    RefSeq.
SOURCE      Gracilibacillus boraciitolerans
  ORGANISM  Gracilibacillus boraciitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Gracilibacillus.
REFERENCE   1  (residues 1 to 191)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 191)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Gracilibacillus boraciitolerans"
                     /db_xref="taxon:307521"
     Protein         1..191
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=22380
     Region          5..181
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(24,57,162,165)
                     /site_type="active"
                     /db_xref="CDD:239601"
ORIGIN      
        1 mgiledrlde qnydvtfdnf gkrgnrtdhl lkrlheepei tkaledadiv lmtigandim
       61 qimkdnfmnl tvepfveare pygnrlseif dyilsvqpea evyllgffnp fekyfgdiep
      121 lrqiltrwnh kslevtnqyd qvtyipmqdi yqneaqdvfa ednfhpnskg yeliaervin
      181 ylendideaq n
//
LOCUS       WP_235182902             350 aa            linear   BCT 02-MAR-2025
DEFINITION  M28 family peptidase [Gracilibacillus boraciitolerans].
ACCESSION   WP_235182902
VERSION     WP_235182902.1
KEYWORDS    RefSeq.
SOURCE      Gracilibacillus boraciitolerans
  ORGANISM  Gracilibacillus boraciitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Gracilibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016289.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04389.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Gracilibacillus boraciitolerans"
                     /db_xref="taxon:307521"
     Protein         1..350
                     /product="M28 family peptidase"
                     /calculated_mol_wt=39949
     Region          205..>333
                     /region_name="PepD2"
                     /note="Di- or tripeptidase [Amino acid transport and
                     metabolism]; COG2195"
                     /db_xref="CDD:441798"
ORIGIN      
        1 mktwnqlfir hgwnvqkneg nvfdcqmetk enveflqknl ealgvsywme gsnliladkp
       61 vaecewikil dfpnrgrgeg lwfepgqedp kveeldtyic givrqfnrlg fhtkgscdgh
      121 gkrsphvmvk kekdidqlag mllalglkrv yyreqrnsyc iylhaqknel ldlaekmsli
      181 eehwlelgle yikeqmfyls legglltipg tsgdeslvre fvkeklqpfv dnistdrhgn
      241 llaektynsg ngptillnah ldtvveinad rkiskidsiw tssegilgad dragvailln
      301 iaeslvhssf sgkvkyifti eeergligar nlddyflwgn rccnrrrskr
//
LOCUS       WP_235182949             182 aa            linear   BCT 02-MAR-2025
DEFINITION  radical SAM protein [Gracilibacillus boraciitolerans].
ACCESSION   WP_235182949
VERSION     WP_235182949.1
KEYWORDS    RefSeq.
SOURCE      Gracilibacillus boraciitolerans
  ORGANISM  Gracilibacillus boraciitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Gracilibacillus.
REFERENCE   1  (residues 1 to 182)
  AUTHORS   Benjdia,A., Leprince,J., Guillot,A., Vaudry,H., Rabot,S. and
            Berteau,O.
  TITLE     Anaerobic sulfatase-maturating enzymes: radical SAM enzymes able to
            catalyze in vitro sulfatase post-translational modification
  JOURNAL   J Am Chem Soc 129 (12), 3462-3463 (2007)
   PUBMED   17335281
REFERENCE   2  (residues 1 to 182)
  AUTHORS   Berteau,O., Guillot,A., Benjdia,A. and Rabot,S.
  TITLE     A new type of bacterial sulfatase reveals a novel maturation
            pathway in prokaryotes
  JOURNAL   J Biol Chem 281 (32), 22464-22470 (2006)
   PUBMED   16766528
REFERENCE   3  (residues 1 to 182)
  AUTHORS   Sofia,H.J., Chen,G., Hetzler,B.G., Reyes-Spindola,J.F. and
            Miller,N.E.
  TITLE     Radical SAM, a novel protein superfamily linking unresolved steps
            in familiar biosynthetic pathways with radical mechanisms:
            functional characterization using new analysis and information
            visualization methods
  JOURNAL   Nucleic Acids Res 29 (5), 1097-1106 (2001)
   PUBMED   11222759
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015983.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04055.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Gracilibacillus boraciitolerans"
                     /db_xref="taxon:307521"
     Protein         1..182
                     /product="radical SAM protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0051539 - 4 iron, 4 sulfur cluster
                     binding [Evidence IEA]"
                     /calculated_mol_wt=21367
     Region          9..>140
                     /region_name="rSAM_YfkAB"
                     /note="radical SAM/CxCxxxxC motif protein YfkAB;
                     TIGR04478"
                     /db_xref="CDD:275271"
ORIGIN      
        1 mtfveeakrl itpefdpwea ymdveqygem tltniefttt hlcnmrcahc avgytlsdkd
       61 pdalpfdllk krldeiphlr tlsitggepm mskksvreyv vpllryaher gvrtqinsnl
      121 tlpysryqai vpyldvlhis iiggerkrsl qlqvlriwne nqvrkiarnt fqewwtihkd
      181 wr
//
LOCUS       WP_235182979             317 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar filament capping protein FliD [Gracilibacillus
            boraciitolerans].
ACCESSION   WP_235182979
VERSION     WP_235182979.1
KEYWORDS    RefSeq.
SOURCE      Gracilibacillus boraciitolerans
  ORGANISM  Gracilibacillus boraciitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Gracilibacillus.
REFERENCE   1  (residues 1 to 317)
  AUTHORS   Tasteyre,A., Karjalainen,T., Avesani,V., Delmee,M., Collignon,A.,
            Bourlioux,P. and Barc,M.C.
  TITLE     Molecular characterization of fliD gene encoding flagellar cap and
            its expression among Clostridium difficile isolates from different
            serogroups
  JOURNAL   J Clin Microbiol 39 (3), 1178-1183 (2001)
   PUBMED   11230454
REFERENCE   2  (residues 1 to 317)
  AUTHORS   Arora,S.K., Ritchings,B.W., Almira,E.C., Lory,S. and Ramphal,R.
  TITLE     The Pseudomonas aeruginosa flagellar cap protein, FliD, is
            responsible for mucin adhesion
  JOURNAL   Infect Immun 66 (3), 1000-1007 (1998)
   PUBMED   9488388
REFERENCE   3  (residues 1 to 317)
  AUTHORS   Chen,L. and Helmann,J.D.
  TITLE     The Bacillus subtilis sigma D-dependent operon encoding the
            flagellar proteins FliD, FliS, and FliT
  JOURNAL   J Bacteriol 176 (11), 3093-3101 (1994)
   PUBMED   8195064
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07195.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Gracilibacillus boraciitolerans"
                     /db_xref="taxon:307521"
     gene            1..317
                     /gene="fliD"
     Protein         1..317
                     /product="flagellar filament capping protein FliD"
                     /GO_component="GO:0009288 - bacterial-type flagellum
                     [Evidence IEA]"
                     /GO_process="GO:0007155 - cell adhesion [Evidence IEA]"
                     /calculated_mol_wt=35612
     Region          <19..314
                     /region_name="fliD"
                     /note="flagellar hook-associated protein 2; PRK07737"
                     /db_xref="CDD:236082"
ORIGIN      
        1 mrrtetgkfs etgqdmkisg sfmsdalqfn vatnytegkn aiftinglet erntnnfqid
       61 gvtfnlkqtf aaadgpvtvg vtndsdavfe nikkfvetyn tlideingkv teeyhrdykp
      121 ltddqresls ekqqedwekm aksgllrrdt mlqgalstmr tdfyspvnng esagsfnqla
      181 qigitttkny msggkleine aklkeaiegd pagvenlfrg dgegygekgi arrltdsvns
      241 tmdsiyerag ratatnqqft igrnlndvee qiqrfqdrlt qiedrywrqf tvmekamqqa
      301 nqqasymmqq fggmgmq
//
LOCUS       WP_235182985             192 aa            linear   BCT 02-MAR-2025
DEFINITION  BCCT family transporter [Gracilibacillus boraciitolerans].
ACCESSION   WP_235182985
VERSION     WP_235182985.1
KEYWORDS    RefSeq.
SOURCE      Gracilibacillus boraciitolerans
  ORGANISM  Gracilibacillus boraciitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Gracilibacillus.
REFERENCE   1  (residues 1 to 192)
  AUTHORS   Jung,H., Buchholz,M., Clausen,J., Nietschke,M., Revermann,A.,
            Schmid,R. and Jung,K.
  TITLE     CaiT of Escherichia coli, a new transporter catalyzing
            L-carnitine/gamma -butyrobetaine exchange
  JOURNAL   J Biol Chem 277 (42), 39251-39258 (2002)
   PUBMED   12163501
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02028.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Gracilibacillus boraciitolerans"
                     /db_xref="taxon:307521"
     Protein         1..192
                     /product="BCCT family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0071705 - nitrogen compound transport
                     [Evidence IEA]"
                     /calculated_mol_wt=21426
     Region          <1..139
                     /region_name="BetT"
                     /note="Choline-glycine betaine transporter [Cell
                     wall/membrane/envelope biogenesis]; COG1292"
                     /db_xref="CDD:440903"
ORIGIN      
        1 memygaggla elinseveia lfamlaelpl smitntlail liliffitsa dsasfvlgsm
       61 tsngdlepkt wiklvwgfli agaasvllfs gggglnalqt asiiaalpfa iimvlmivsv
      121 litlskdwki drklrrrkre drvkgefkee fvddfkeeiy nemkdelydd fkekihkeik
      181 deivkeiske dk
//
LOCUS       WP_235183023             184 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5819 family protein [Gracilibacillus boraciitolerans].
ACCESSION   WP_235183023
VERSION     WP_235183023.1
KEYWORDS    RefSeq.
SOURCE      Gracilibacillus boraciitolerans
  ORGANISM  Gracilibacillus boraciitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Gracilibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040205.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19136.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Gracilibacillus boraciitolerans"
                     /db_xref="taxon:307521"
     Protein         1..184
                     /product="DUF5819 family protein"
                     /calculated_mol_wt=21675
     Region          8..173
                     /region_name="DUF5819"
                     /note="Family of unknown function (DUF5819); pfam19136"
                     /db_xref="CDD:465980"
ORIGIN      
        1 mkfkpftdky vdnffrqswh lfapepltnn ytmfvqvklr nnntesewyn itdplvrann
       61 dsvftpynrm lrvglgyins ynlgvtdvlt vkimnkslek sddtsrydel aeitqsevek
      121 vlyryassya kkiydekdid kirilinste avpyskrndk eyqpeenftt lewkelnnnv
      181 vafp
//
LOCUS       WP_235183024             262 aa            linear   BCT 02-MAR-2025
DEFINITION  DCC1-like thiol-disulfide oxidoreductase family protein
            [Gracilibacillus boraciitolerans].
ACCESSION   WP_235183024
VERSION     WP_235183024.1
KEYWORDS    RefSeq.
SOURCE      Gracilibacillus boraciitolerans
  ORGANISM  Gracilibacillus boraciitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Gracilibacillus.
REFERENCE   1  (residues 1 to 262)
  AUTHORS   Zhang,H., Zhang,T.T., Liu,H., Shi,Y., Wang,M., Bie,X.M., Li,X.G.
            and Zhang,X.S.
  TITLE     Thioredoxin-Mediated ROS Homeostasis Explains Natural Variation in
            Plant Regeneration
  JOURNAL   Plant Physiol 176 (3), 2231-2250 (2018)
   PUBMED   28724620
  REMARK    Erratum:[Plant Physiol. 2018 Mar;176(3):2570-2582. doi:
            10.1104/pp.18.00085.. PMID: 29630500]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016056.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04134.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Gracilibacillus boraciitolerans"
                     /db_xref="taxon:307521"
     Protein         1..262
                     /product="DCC1-like thiol-disulfide oxidoreductase family
                     protein"
                     /GO_function="GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=30376
     Region          <2..98
                     /region_name="HTTM"
                     /note="Horizontally Transferred TransMembrane Domain;
                     cl02773"
                     /db_xref="CDD:275778"
     Region          134..241
                     /region_name="YuxK"
                     /note="Predicted thiol-disulfide oxidoreductase YuxK, DCC
                     family [General function prediction only]; COG3011"
                     /db_xref="CDD:442248"
ORIGIN      
        1 mgevwqngta iyyisqvsef srsilqnlte nylwvtivis ylsiliklaf pfcllnkaik
       61 pyivlsmilf hvgigigmgl lsfslvmimf ellvftdsey lrfkhkfkyq yrkiatnvkr
      121 ktrsfgtkhl vkyqilvffd gwcpmcrqvm ktinkmdlfn lvksasirnq kvlnenqlvk
      181 eeveirmhsk sviegemkrg fdsilqictr lvplyvlipf llvgkflrlg dliydyiakr
      241 rlivpvnhcd dsgcdiniqs ks
//
LOCUS       WP_235182613              87 aa            linear   BCT 02-MAR-2025
DEFINITION  deoxynucleoside kinase [Gracilibacillus boraciitolerans].
ACCESSION   WP_235182613
VERSION     WP_235182613.1
KEYWORDS    RefSeq.
SOURCE      Gracilibacillus boraciitolerans
  ORGANISM  Gracilibacillus boraciitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Gracilibacillus.
REFERENCE   1  (residues 1 to 87)
  AUTHORS   Johansson,M. and Karlsson,A.
  TITLE     Cloning of the cDNA and chromosome localization of the gene for
            human thymidine kinase 2
  JOURNAL   J Biol Chem 272 (13), 8454-8458 (1997)
   PUBMED   9079672
REFERENCE   2  (residues 1 to 87)
  AUTHORS   Johansson,M. and Karlsson,A.
  TITLE     Cloning and expression of human deoxyguanosine kinase cDNA
  JOURNAL   Proc Natl Acad Sci U S A 93 (14), 7258-7262 (1996)
   PUBMED   8692979
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013843.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01712.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Gracilibacillus boraciitolerans"
                     /db_xref="taxon:307521"
     Protein         1..87
                     /product="deoxynucleoside kinase"
                     /calculated_mol_wt=10201
     Region          <16..75
                     /region_name="Dck"
                     /note="Deoxyadenosine/deoxycytidine kinase [Nucleotide
                     transport and metabolism]; COG1428"
                     /db_xref="CDD:441037"
ORIGIN      
        1 mkyqrkkrfv gltvggrsye vatenaywer lnkeyreyfe aynaspvlki nvdqldfenn
       61 padrdyvlsl irnelealys iesklak
//
LOCUS       WP_235183113             175 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase family protein [Corynebacterium
            pseudotuberculosis].
ACCESSION   WP_235183113
VERSION     WP_235183113.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium pseudotuberculosis
  ORGANISM  Corynebacterium pseudotuberculosis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04851.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Corynebacterium pseudotuberculosis"
                     /db_xref="taxon:1719"
     Protein         1..175
                     /product="DEAD/DEAH box helicase family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=19115
     Region          1..>173
                     /region_name="PRK15483"
                     /note="type III restriction-modification system
                     endonuclease"
                     /db_xref="CDD:237972"
ORIGIN      
        1 mqirlqtleh qqraltaitr vfhgvdfdsg glmeanptfd ladsqlahni selqngavag
       61 vsaiprawrg rvddgvlgid vkmetgtgkt lvytqmmyel nrlygftkfi vvvpstaikl
      121 gtrsfitsey acnyfddtyg gsikleldvl dpqkrskgrk ffpsavanfv saspg
//
LOCUS       WP_235183122              48 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GTP-binding protein, partial [Pasteurellaceae].
ACCESSION   WP_235183122
VERSION     WP_235183122.1
KEYWORDS    RefSeq.
SOURCE      Pasteurellaceae
  ORGANISM  Pasteurellaceae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales.
REFERENCE   1  (residues 1 to 48)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..48
                     /organism="Pasteurellaceae"
                     /db_xref="taxon:712"
     Protein         1..>48
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>48
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 mskekfertk phvnvgtigh vdhgkttlta aittvlakhy ggaarafd
//
LOCUS       WP_235183125             209 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Deinococcus phoenicis].
ACCESSION   WP_235183125
VERSION     WP_235183125.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus phoenicis
  ORGANISM  Deinococcus phoenicis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
REFERENCE   1  (residues 1 to 209)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Deinococcus phoenicis"
                     /db_xref="taxon:1476583"
     Protein         1..209
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=21927
     Region          74..>167
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     Site            136..140
                     /site_type="active"
                     /note="nucleophilic elbow [active]"
                     /db_xref="CDD:238382"
ORIGIN      
        1 mrrpshfrta lvvvlaflag gavgrlsplv lrpplvlgqd aappgvdaaa rswlerepqp
       61 fidirprngm adillilypg glvrpqayew lgkalaargv qtvipvfpld lavlganrae
      121 gliarfgpgk rvviaghslg gvmaaqyaar hpaqlsglil laaypaenvd lraagwtvcp
      181 rtppsrscpv psmpfsggma rkgttvsrp
//
LOCUS       WP_235183163             567 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Deinococcus phoenicis].
ACCESSION   WP_235183163
VERSION     WP_235183163.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus phoenicis
  ORGANISM  Deinococcus phoenicis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024816.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13424.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Deinococcus phoenicis"
                     /db_xref="taxon:1476583"
     Protein         1..567
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=61322
     Region          <169..554
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
ORIGIN      
        1 mprppvlsvt deelaasvaa lleegqdala lrtltlaagd vqltarltfl ldlltrlpad
       61 llgsepgvrl hlqllsglrr hdrvlevtaa ahaaglsapf ldvyrgwals qqdlfpeala
      121 alapalqtgp daldltpved tlawrvrars larqgqdgwr eayararrra agrplalvwl
      181 eegatlgrrg dvvdalaaya qalplvegdp yyraltlhnm glvclracrf eeaetyfqrv
      241 rqvrrraaaf qaraqcgeaa vrralgewer aeaayraald ldpddddrrq awrglghtlr
      301 lagrplsale wltraanvta gqrqtgrswv fvdlaaahaa lrdpraaqaa ldrtgplsge
      361 dadreqivra elarqagdag talallqpld rrtlwareea hafpalfall grgrpaplar
      421 pacphvlvra agpldvrvng rrvplaptal agvllvalle aggqagtgql alavsgheer
      481 rerhgkqavs rlarelrral gwegsvrasa gayfldpqad wrydvreaqa agqpveafls
      541 gvtlpwvldr etelrqqgsg sfspdsg
//
LOCUS       WP_235183249            1083 aa            linear   BCT 02-MAR-2025
DEFINITION  GAF domain-containing protein [Deinococcus phoenicis].
ACCESSION   WP_235183249
VERSION     WP_235183249.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus phoenicis
  ORGANISM  Deinococcus phoenicis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
REFERENCE   1  (residues 1 to 1083)
  AUTHORS   Heikaus,C.C., Pandit,J. and Klevit,R.E.
  TITLE     Cyclic nucleotide binding GAF domains from phosphodiesterases:
            structural and mechanistic insights
  JOURNAL   Structure 17 (12), 1551-1557 (2009)
   PUBMED   20004158
REFERENCE   2  (residues 1 to 1083)
  AUTHORS   Ho,Y.S., Burden,L.M. and Hurley,J.H.
  TITLE     Structure of the GAF domain, a ubiquitous signaling motif and a new
            class of cyclic GMP receptor
  JOURNAL   EMBO J 19 (20), 5288-5299 (2000)
   PUBMED   11032796
  REMARK    Erratum:[EMBO J 2001 Mar 15;20(6):1483]
REFERENCE   3  (residues 1 to 1083)
  AUTHORS   Aravind,L. and Ponting,C.P.
  TITLE     The GAF domain: an evolutionary link between diverse
            phototransducing proteins
  JOURNAL   Trends Biochem Sci 22 (12), 458-459 (1997)
   PUBMED   9433123
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024583.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13185.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Deinococcus phoenicis"
                     /db_xref="taxon:1476583"
     Protein         1..1083
                     /product="GAF domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=119044
     Region          15..192
                     /region_name="PtsP"
                     /note="Signal transduction protein containing GAF and PtsI
                     domains [Signal transduction mechanisms]; COG3605"
                     /db_xref="CDD:442824"
     Region          <183..317
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          <241..765
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          595..1083
                     /region_name="COG4251"
                     /note="Bacteriophytochrome (light-regulated signal
                     transduction histidine kinase) [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443393"
ORIGIN      
        1 mspvlppfps lgdhlqdvte alaaartqad vfgivlrpal ealgalagav llvggtgetl
       61 slaatqghpd gappfwqagp ldrrfpagda larhealffe hagamtqayp elssrsggtp
      121 pvasavlpmf ldgaplgvlv ldfrepheft vderrflril taqcavalgr aqllgtlsae
      181 lrqrrhteen lrvsearfrr lvesspvsia agdltgtlfl vngtylkllg ytraefeagl
      241 idwaaltppe yreaderafa qafehgasdr yekemltrtg ervpltvlll ryeehgqqyv
      301 vgylqdlrpf raaervlreh gaelarqvea rtakleerta aldafvafte aigsetdvla
      361 larqatqvvr anldhvsaas yeleegrwka rvwsedvlpd vaaqmqvgvp qdapnyaeav
      421 qsraavfvdg wdaeanhlps aavygaaafi pifvggevrr ifavgtrdar awterekavv
      481 ravgrslgla lerteaarrl keqnaelaar tralegfaal trdlslhsdp tllvrlaqev
      541 vlpllpegya ayyepdggrw rlrsqvgdrq dadfqtlveg glpldsthsl ltpwttrqay
      601 yldeydqhad gleayrerrg glaalpvlvn gqphgvfgva lrqrqpwgaa eravletvvh
      661 slglalerae aarklqaqna elearsrale sfsdllgdlt lqsepnklig raldrvmtll
      721 pegygafwel rgerwyataq ardvgsaalq atidaglpag qtptldipyr trapyfqdvy
      781 aqgadtapev vshvnavatl pvlvrgevlg ifnvplfhqr rwsaedravl ettvrslgla
      841 leraegvadl arrteelars naeleqfayi ashdlqapir avtsfagmie rkyggqlder
      901 grlylrqivd sgehmkrlvd dllafsrvht qqrdlrptds gavfdhvvrr lqpdiealga
      961 vvtrtalpsv ladpqqldql lqnlisnalk yrregvpprv qvtaerdgew qrfavtdngi
     1021 giepeyferi fvifqrlhgr eayegtgigl avckkiverh ggqlwlestp gqgstffftl
     1081 pae
//
LOCUS       WP_235183302             907 aa            linear   BCT 02-MAR-2025
DEFINITION  putative LPS assembly protein LptD [Nonlabens ulvanivorans].
ACCESSION   WP_235183302
VERSION     WP_235183302.1
KEYWORDS    RefSeq.
SOURCE      Nonlabens ulvanivorans
  ORGANISM  Nonlabens ulvanivorans
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Nonlabens.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040057.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19838.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Nonlabens ulvanivorans"
                     /db_xref="taxon:906888"
     Protein         1..907
                     /product="putative LPS assembly protein LptD"
                     /calculated_mol_wt=103062
     Region          222..697
                     /region_name="LptD_2"
                     /note="LptD protein; pfam19838"
                     /db_xref="CDD:466203"
ORIGIN      
        1 mkryiilsiv fltaslicha qelpnnstpi paekpvened kkpqqpvaet ieidldtlql
       61 nkpkdstkrk pilehkliss atdykeidri nntitlynea kiiygditle agkiimnmnt
      121 gdifaygvid tagvyvqkpi ftqgqnvvkp dsiifnkdtr kaltynsita qgefnvkaev
      181 tkrvndsvyy mkraifttsk dpnnpdyyfl arkikfvpge kivtglvnmy iadvptpigl
      241 pfayfpmttd rksgviipsf gnnnnqgyfl qnggyyfain dyvdltvlgd yftngswgsr
      301 iessyrkrya fngsfrflye nqiqsergfs dfqqtnryni nwqhsqdaks npnsrfsasv
      361 nlgssqffrq sfnqvnqsat lvnnlsssis ysktfpgepq vnvtttvshn qntntdvvnl
      421 tlptlqasvs rvfpfapkeg akkglihnin lqynlrgenr iattdddflt skmfdgaisg
      481 lrhtipistn fkianyfsvg lnasydeswv fetyrqfled ngsggfntvr dtvsgfdayr
      541 tynygasigt tvygnwkstd keskiqairh vmrpsvtysa npsfeqyydr lldeqgldvs
      601 eeerfysrfe gtlynapgrv yssslgiglq ntleakvrdr dstktelkki sliksfnvnt
      661 synlagdsln wsplqlrgvi piyknidlnl danldpyald ntnqridrfn innggslfrl
      721 tragarfnfr lsntdfekqt dkkddkpddp lqnrnlqngg reddlfgasi dyadgttydq
      781 repekenvdi dktryrfkip wnlnfaytmt ynnaqrqnei nnqslmvsgd ielsprwsvg
      841 gntgydfank gvsfttlrfn rdleswrlsf nwtpigpqns wfffigiksg alsdikwdqr
      901 kqpdpqf
//
LOCUS       WP_235183304             125 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4844 domain-containing protein [Nonlabens ulvanivorans].
ACCESSION   WP_235183304
VERSION     WP_235183304.1
KEYWORDS    RefSeq.
SOURCE      Nonlabens ulvanivorans
  ORGANISM  Nonlabens ulvanivorans
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Nonlabens.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027459.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16133.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Nonlabens ulvanivorans"
                     /db_xref="taxon:906888"
     Protein         1..125
                     /product="DUF4844 domain-containing protein"
                     /calculated_mol_wt=14393
     Region          5..118
                     /region_name="DUF4844"
                     /note="Domain of unknown function (DUF4844); pfam16133"
                     /db_xref="CDD:406522"
ORIGIN      
        1 mktpenanek faefiakkkf vaenhypgia deqmqpvfte kinqiasdfk tvaeskkptd
       61 kkyqekirig lsnfvdvyle ldtedrervc syieelmdiv elessnglln kfmygfdpne
      121 lskkn
//
LOCUS       WP_235183312             702 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Nonlabens
            ulvanivorans].
ACCESSION   WP_235183312
VERSION     WP_235183312.1
KEYWORDS    RefSeq.
SOURCE      Nonlabens ulvanivorans
  ORGANISM  Nonlabens ulvanivorans
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Nonlabens.
REFERENCE   1  (residues 1 to 702)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Nonlabens ulvanivorans"
                     /db_xref="taxon:906888"
     Protein         1..702
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=79138
     Region          70..702
                     /region_name="TonB-copper"
                     /note="TonB-dependent copper receptor; TIGR01778"
                     /db_xref="CDD:273801"
ORIGIN      
        1 mkmkqlalic alipmslfaq ettkkvqdtt gtkpvalntv ivtgqgatdp vlttvrtdlv
       61 kkvvqpknva dlfrdfngfs likrgnyaid psfrasqyeq lniqfdggtk amhacpnrmd
      121 pitthvvped ierievikgp ytvrygatfg giinlvtekp ihlgngfqgs vssgyetngn
      181 alvsslklhq itdryditan agyrdfgnye dgdgteipss fksldyglrl gynikdnqri
      241 qahwrqsygr dvlhaglpmd tdednssils idykiskvnd fieeinakay ysyvdhimsn
      301 nrrpsfmmte aistidatta ggkvefkmkp tekwilyggl dalliardgv rtrtvkrnmm
      361 gdllpepmvf qdkvwqdsyv ndyglfaenk yafsnktmlt agvrydlvvs diqdpeadfq
      421 alyndlgqre ehnvsatvsv khklsgnntl eiaygrgvrs anmieryinh fsvgqdpfey
      481 vgnpnldaev nnqfeigfkg krtfekgida irygisgyys iyenyivpmv dptldrkfnp
      541 taqpqevkrf iniddayktg feaeasiefa nyfnfntafs yvytrnndld eslpltppfi
      601 trlglgfeke kfwanldyti tskqdeists freietagye tldlrlgvkp yknvqlgvav
      661 lnifdatynn hlnfsftnqa dfgrvpindp grnfsvfany qf
//
LOCUS       WP_235183334            1831 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA domain-containing protein [Nonlabens ulvanivorans].
ACCESSION   WP_235183334
VERSION     WP_235183334.1
KEYWORDS    RefSeq.
SOURCE      Nonlabens ulvanivorans
  ORGANISM  Nonlabens ulvanivorans
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Nonlabens.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024487.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13087.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1831
                     /organism="Nonlabens ulvanivorans"
                     /db_xref="taxon:906888"
     Protein         1..1831
                     /product="AAA domain-containing protein"
                     /calculated_mol_wt=212286
     Region          266..421
                     /region_name="DUF4011"
                     /note="Protein of unknown function (DUF4011); pfam13195"
                     /db_xref="CDD:463806"
     Region          630..>687
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Region          632..>785
                     /region_name="AAA_11"
                     /note="AAA domain; pfam13086"
                     /db_xref="CDD:404072"
     Site            652..658
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          843..1575
                     /region_name="DNA2"
                     /note="Superfamily I DNA and/or RNA helicase [Replication,
                     recombination and repair]; COG1112"
                     /db_xref="CDD:440729"
     Region          1615..1703
                     /region_name="MTES_1575"
                     /note="REase_MTES_1575; cl46272"
                     /db_xref="CDD:480612"
     Region          1767..1831
                     /region_name="WGR"
                     /note="WGR domain, predicted DNA-binding domain in MolR
                     [Transcription]; COG3831"
                     /db_xref="CDD:443043"
ORIGIN      
        1 mkikitasti msdykasffs lldevkdhgg sttadfiarv lpliekahfl rsrnlvlgvy
       61 siediyfngr iisidsegke frtgehkifk kpkqryavev sgnyseiski egddydqhiy
      121 ddeaiqedfe kpitkpvyla rykswdletg hydpiteift lgfilasvay gidfrdidel
      181 krfienrerl yfynkdlhpt ihhviremtp lyredrapsl eeiiaklkny rdfnpenyid
      241 ltdtegfrnl nlsdrgsyil dklkrrlfdi srrnkllyfn drggflnlte asvpmlldyk
      301 nitekdlifw nahiqtqfis kkkvnlnryl eldknrflsp alnkirlear kstneygfdq
      361 lrvvvaflhw ynfkeseder isspllllpv slvkkkgvkd rfelnvndse aeinpvlsyy
      421 lkdlygielp dfidletssi eelvqsiknq islggtgidl rwrdkpkiql ihklakrnfk
      481 lkkrklsnrn sglstrsydy sydaqnvkpl glaifnnlia kkhneleyii nedinpysdl
      541 avaerrrsfy htdndgdvnp lvwevdtcnm tignfkyrkm slvrdyseil kadikdevfd
      601 elfseqpkkm nldgyqksgl adlypiiqsd ptqsqavlra rsgenyiiqg ppgtgksqti
      661 tnliadyvar dqkvlfvcek raaldvvfhr lknkkldelc clihdsqtdk kafimnlkdt
      721 yeafmkkdms tstlsrkrek iinqiethlg klehfhdtmr dgmpplfelf qelityyqtk
      781 eklsdneliy vpfykewken etwitemiaq iklnnhghni sdyalnglsq glldvpnskg
      841 vvlekieatv slldrlnell deqevtvrtq svaawrlefd faskvskiva qnalgvfdts
      901 tiaasnldnl nrriekqrkl ylrlvdenkn wtqkldatda kiaqeqwqrl dgsffkflnp
      961 swyriknqlk aaynfrahni apsiesvlkt lneeyaales leqqreeaan kfgledfvsd
     1021 yewikqqqld pddiikswma tdhtsyvnsl lgfkldfdqf denlnqlftn cdhhllsqie
     1081 dklqrgkasi htiglftpyi mqlqstskem qdnlrrkpwq tgdiafhtay kslkevydke
     1141 pvfsqtsedi lassvrsvda lldsyyesnv afirskirdk flnkvrites vaaqltpeek
     1201 ilkkkynasr rvlenefgks mryksirela tgeaqeimtt lkpvwlmspl svsdsmpidt
     1261 sifdvviyde asqitveegv pslfrthqti ivgdemqmpp tnffssnttd qeedeeetee
     1321 ktgimldads llnqgarkls svmlgwhyrs rreslisfsn aafykrnllt ipdsripnag
     1381 ieplepiitp dqeidaqdvl krsisfhyme navyhkrvnk deatyianmv rtflmkdvkk
     1441 sigivafsma qqseieeald klaqedphfg klleeeyqrt eedqfvglfv knlenvqgde
     1501 rdiiimsicy gfnnqgkmfm nfgpinrrgg ekrlnvifsr akrnmiivss ilaanikndy
     1561 neganyfkrf layakfisdg qlesangild slhldddeee rtkrlpiinq lktvlekdgy
     1621 ivdraigqsh fkcdlalrks dsesyelail idrsthyatd dileqysqkp avlkafgwkl
     1681 qhiyskdwle qpervlekir qklegkeedp edpeelesel erenqidave eiksndessn
     1741 tlipevlete lepetaqrpq gnltfkryef vegssnkywe iavdgfdiit rygrignkpq
     1801 enrkslddqv avlkeemrli gvktrkgyrp v
//
LOCUS       WP_235183382             308 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4427 domain-containing protein, partial [Ralstonia
            solanacearum].
ACCESSION   WP_235183382
VERSION     WP_235183382.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia solanacearum
  ORGANISM  Ralstonia solanacearum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Ralstonia; Ralstonia
            solanacearum species complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025823.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14468.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Ralstonia solanacearum"
                     /db_xref="taxon:305"
     Protein         <1..308
                     /product="DUF4427 domain-containing protein"
     Region          177..306
                     /region_name="DUF4427"
                     /note="Protein of unknown function (DUF4427); pfam14468"
                     /db_xref="CDD:291157"
ORIGIN      
        1 ieaslpqsek prwhdsrfhs ptslisgslg ggprifprev lpepeqyryv tynpsgpykv
       61 dwmherewrw pysgslasve heleeyglis daadipgfdf adprlkgigi ivksaedark
      121 lkhdvlalid rgvvhrnhfd hilvqdllpd tssligpddv qaaingalid fssyfnlpga
      181 dvkqivsdfs grvqrlegra pemtsppler ggcwlwlhdn thpyvralvq agrvtvnkeg
      241 ryvasldeld sgrdlrerqq ltlelarelq vefcihsgyf lvlnsfdsdg ipfyidslpe
      301 ddlynncg
//
LOCUS       WP_235183480             431 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease subunit S [Geobacillus genomosp. 3].
ACCESSION   WP_235183480
VERSION     WP_235183480.1
KEYWORDS    RefSeq.
SOURCE      Geobacillus genomosp. 3
  ORGANISM  Geobacillus genomosp. 3
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Anoxybacillaceae; Geobacillus.
REFERENCE   1  (residues 1 to 431)
  AUTHORS   Janscak,P. and Bickle,T.A.
  TITLE     The DNA recognition subunit of the type IB restriction-modification
            enzyme EcoAI tolerates circular permutions of its polypeptide chain
  JOURNAL   J Mol Biol 284 (4), 937-948 (1998)
   PUBMED   9837717
REFERENCE   2  (residues 1 to 431)
  AUTHORS   Bickle,T.A. and Kruger,D.H.
  TITLE     Biology of DNA restriction
  JOURNAL   Microbiol Rev 57 (2), 434-450 (1993)
   PUBMED   8336674
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01420.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Geobacillus genomosp. 3"
                     /db_xref="taxon:1921421"
     Protein         1..431
                     /product="restriction endonuclease subunit S"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=49144
     Region          14..203
                     /region_name="RMtype1_S_EcoKI-TRD1-CR1_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR), similar to S.EcoKI TRD1-CR1, S.StySPI TRD1-CR1,
                     S.Ara36733II TRD1-CR1, and S.Eco3722I TRD1-CR1; cd17252"
                     /db_xref="CDD:341141"
     Site            order(27..30,47..48,52,72..74,84,86,107..109,150,153..154)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:341141"
     Site            order(126,130,163,168..169,173,176..177,180,184,187,
                     190..191,198,201)
                     /site_type="other"
                     /note="TRD-CR/TRD-CR interface [polypeptide binding]"
                     /db_xref="CDD:341141"
     Site            order(138..139,141..147)
                     /site_type="other"
                     /note="HsdM interface [polypeptide binding]"
                     /db_xref="CDD:341141"
     Region          227..416
                     /region_name="RMtype1_S_SonII-TRD2-CR2_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR), similar to Shewanella oneidensis MR-1 S subunit
                     (S.SonII) TRD2-CR2; cd17246"
                     /db_xref="CDD:341135"
     Site            order(337..338,340..341,370,372,378,382,385..386,389,
                     403..404,407..408,411,413..414)
                     /site_type="other"
                     /note="putative TRD-CR/TRD-CR interface [polypeptide
                     binding]"
                     /db_xref="CDD:341135"
ORIGIN      
        1 msrtklanef pkdweirkly eigstysglt nknkedfeng nskfitykni ynntfidine
       61 lesvrinpge kqnevkygdv fftgssetpd evgissvlle diknvylnsf cfgfrfndin
      121 ltipefygyy frgpifrrev yplaqgstrf nlskselikl kipippvpeq rkiaailssv
      181 deaiekteti ieqtekvkkg lmqqlltkgi ghtkfkktei geipeewdik rleelsdrif
      241 vgiatstteh ycetgipiir nqnikenfld sndmmfiteh fdmenrnkkl kpgdiltvrt
      301 gypgtscvvp dsfegaqtft tlvtrpkhsi idaeflcryi nshigkkyvl ggqvggaqkn
      361 lnvsvmaklp vpvppmneqk kirdilisfe nkilcekhql etlenlkksl mqslltgkvr
      421 vkvdedevms s
//
LOCUS       WP_235183177              86 aa            linear   BCT 02-MAR-2025
DEFINITION  HNH endonuclease [Deinococcus phoenicis].
ACCESSION   WP_235183177
VERSION     WP_235183177.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus phoenicis
  ORGANISM  Deinococcus phoenicis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
REFERENCE   1  (residues 1 to 86)
  AUTHORS   Krishna,S.S., Majumdar,I. and Grishin,N.V.
  TITLE     Structural classification of zinc fingers: survey and summary
  JOURNAL   Nucleic Acids Res 31 (2), 532-550 (2003)
   PUBMED   12527760
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024784.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13392.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Deinococcus phoenicis"
                     /db_xref="taxon:1476583"
     Protein         1..86
                     /product="HNH endonuclease"
                     /calculated_mol_wt=9681
     Region          1..43
                     /region_name="HNHc"
                     /note="HNH nucleases; HNH endonuclease signature which is
                     found in viral, prokaryotic, and eukaryotic proteins. The
                     alignment includes members of the large group of homing
                     endonucleases, yeast intron 1 protein, MutS, as well as
                     bacterial colicins, pyocins, and...; cl00083"
                     /db_xref="CDD:469607"
ORIGIN      
        1 malhrqiaae rlgrsllpge ivhhrngdst nntpenllvl psqrfhahve yhlrcekrgm
       61 pflfpellqg vqeerpgtlw ggilpq
//
LOCUS       WP_235183539             252 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Bordetella bronchiseptica].
ACCESSION   WP_235183539
VERSION     WP_235183539.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
REFERENCE   1  (residues 1 to 252)
  AUTHORS   Gao,G., Nara,T., Nakajima-Shimada,J. and Aoki,T.
  TITLE     Novel organization and sequences of five genes encoding all six
            enzymes for de novo pyrimidine biosynthesis in Trypanosoma cruzi
  JOURNAL   J Mol Biol 285 (1), 149-161 (1999)
   PUBMED   9878395
REFERENCE   2  (residues 1 to 252)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
REFERENCE   3  (residues 1 to 252)
  AUTHORS   Nygaard,P., Duckert,P. and Saxild,H.H.
  TITLE     Role of adenine deaminase in purine salvage and nitrogen metabolism
            and characterization of the ade gene in Bacillus subtilis
  JOURNAL   J Bacteriol 178 (3), 846-853 (1996)
   PUBMED   8550522
REFERENCE   4  (residues 1 to 252)
  AUTHORS   Lollier,M., Jaquet,L., Nedeva,T., Lacroute,F., Potier,S. and
            Souciet,J.L.
  TITLE     As in Saccharomyces cerevisiae, aspartate transcarbamoylase is
            assembled on a multifunctional protein including a
            dihydroorotase-like cryptic domain in Schizosaccharomyces pombe
  JOURNAL   Curr Genet 28 (2), 138-149 (1995)
   PUBMED   8590465
REFERENCE   5  (residues 1 to 252)
  AUTHORS   Jabri,E., Carr,M.B., Hausinger,R.P. and Karplus,P.A.
  TITLE     The crystal structure of urease from Klebsiella aerogenes
  JOURNAL   Science 268 (5213), 998-1004 (1995)
   PUBMED   7754395
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01979.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..252
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=27657
     Region          <4..199
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
ORIGIN      
        1 maagrrldss aftyeefkii adethrlgrl csvharsrda alyaaqagfd nlfhasyidd
       61 egieaclkng cvitptltll vnlveakqsh agassaqafr qeieaasvnl rraydagvpl
      121 lagsesgwsp vpyghwhare meifvkllgl tplqaihant lactrllarh ghevgkleag
      181 rladvlvlpg npleditllq rpsrfdyifk ggtpvdrtap aprvrkwyer tkiflagvye
      241 ydqenacgrl vq
//
LOCUS       WP_235183552             174 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein [Bordetella bronchiseptica].
ACCESSION   WP_235183552
VERSION     WP_235183552.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
REFERENCE   1  (residues 1 to 174)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..174
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=18653
     Region          <8..173
                     /region_name="AdhE"
                     /note="Acyl-CoA reductase or other NAD-dependent aldehyde
                     dehydrogenase [Lipid transport and metabolism]; COG1012"
                     /db_xref="CDD:440636"
ORIGIN      
        1 mlcgpvlphq eesclaplis arqrdllvda iaqarergar lieggapieq apyahgnyls
       61 paliqvhdld dplwtdeyfg pvlalrvcdd ldqaiaevna tryglgaalf shdaraigrf
      121 tdqvqagvvk indvppglyp hvstggwkas glgpnelsed gvdfflhkks vyla
//
LOCUS       WP_235183560             366 aa            linear   BCT 02-MAR-2025
DEFINITION  enoyl-CoA hydratase-related protein, partial [Bordetella
            bronchiseptica].
ACCESSION   WP_235183560
VERSION     WP_235183560.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012596.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00378.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..>366
                     /product="enoyl-CoA hydratase-related protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          3..275
                     /region_name="CaiD"
                     /note="Enoyl-CoA hydratase/carnithine racemase [Lipid
                     transport and metabolism]; COG1024"
                     /db_xref="CDD:440647"
     Region          287..>328
                     /region_name="FadB"
                     /note="3-hydroxyacyl-CoA dehydrogenase [Lipid transport
                     and metabolism]; COG1250"
                     /db_xref="CDD:440862"
     Region          <313..>366
                     /region_name="Crp"
                     /note="cAMP-binding domain of CRP or a regulatory subunit
                     of cAMP-dependent protein kinases [Signal transduction
                     mechanisms]; COG0664"
                     /db_xref="CDD:440428"
ORIGIN      
        1 msvaiamrgd igvvtldspp vnalgrtlrh glaqcleqay arpdvralll vsarpgifsa
       61 gadikefdqa gsdqdaglae lidrienapv pvvalldgaa lggalelalg chyrlaspra
      121 slglpeiklg llpgaggtqr lprlvgarha vemvlggepv ggetalrykl adallsaddt
      181 leqalawmrn apgglarrrv aslpalapas iaeaaraaai rpvgsaaare aalaclaaaq
      241 gpfdagrale resfarlrdg aearalryaf faerprppag dvsarrieqv avvgagtmgt
      301 givicladag lpdvvalrds vvarlpagtf dwlldtsipf nryllhqlne rvaqfigkae
      361 ydrlld
//
LOCUS       WP_235183594             344 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4238 domain-containing protein, partial [Cellulophaga
            geojensis].
ACCESSION   WP_235183594
VERSION     WP_235183594.1
KEYWORDS    RefSeq.
SOURCE      Cellulophaga geojensis
  ORGANISM  Cellulophaga geojensis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Cellulophaga.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025388.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14022.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Cellulophaga geojensis"
                     /db_xref="taxon:935699"
     Protein         <1..344
                     /product="DUF4238 domain-containing protein"
     Region          25..309
                     /region_name="DUF4238"
                     /note="Protein of unknown function (DUF4238); pfam14022"
                     /db_xref="CDD:464067"
ORIGIN      
        1 pvtsviptvv lniqnctmpe elvkrqhfvp rtylkhfgia eggecfihal pesetekkai
       61 fksnitnval ekhlytlpge tiaqkmaiek fyseeieqhy dsiyqiltdp sitevtseqr
      121 eliistvvtm yyrttkwina srnlkrrvle safqlckqtg kdyfmfedek isikgrelee
      181 ftaewnktrq pgmvliqlet alnlikirla ndgicvvrie ddnlelvtsd npviaennkp
      241 erfapfdpsn ilklpldskh ilmlmpenve glenrifrrn svrpfselek ltsnysqmqn
      301 serfmfgskp alesyldtkq eserpleegd stadifaklk glgl
//
LOCUS       WP_235183623             238 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: alpha/beta fold hydrolase [Bacillus].
ACCESSION   WP_235183623
VERSION     WP_235183623.1
KEYWORDS    RefSeq.
SOURCE      Bacillus
  ORGANISM  Bacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12697.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Bacillus"
                     /db_xref="taxon:1386"
     Protein         1..238
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=26623
     Region          7..232
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 mislntflfv hgafqggwcw dqitpalqqk ghkvvaidlp gsgedvtppq dvslksyvkk
       61 vvsaiekidq pvilvghsms gmvisqaaee ipekikklvy vcafvpengq avsdiasggp
      121 kaalnekdqt ltlieefiae nmlnesseed lrlfkrnirp qpvqpfedkv sltnirfghv
      181 psvyiettkd rsipidlqrq myatrsferi ytldadhfpf ysrkkefvec lvdiaqpq
//
LOCUS       WP_235183627             117 aa            linear   BCT 02-MAR-2025
DEFINITION  T7SS effector LXG polymorphic toxin, partial [Bacillus safensis].
ACCESSION   WP_235183627
VERSION     WP_235183627.1
KEYWORDS    RefSeq.
SOURCE      Bacillus safensis
  ORGANISM  Bacillus safensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 117)
  AUTHORS   Zhang,D., Iyer,L.M. and Aravind,L.
  TITLE     A novel immunity system for bacterial nucleic acid degrading toxins
            and its recruitment in various eukaryotic and DNA viral systems
  JOURNAL   Nucleic Acids Res 39 (11), 4532-4552 (2011)
   PUBMED   21306995
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016617.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04740.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Bacillus safensis"
                     /db_xref="taxon:561879"
     Protein         1..>117
                     /product="T7SS effector LXG polymorphic toxin"
     Region          1..>117
                     /region_name="YeeF"
                     /note="Predicted ribonuclease, toxin component of the
                     YeeF-YezG toxin-antitoxin module [Defense mechanisms];
                     COG5444"
                     /db_xref="CDD:444195"
ORIGIN      
        1 mdtrakhyqe lreqmvdlkk alqgvanlgd dftgkgadni ksfykelagn vdmfisfidk
       61 qkafhegvsg ilddtsfggd tfveehfldn avhmgiknak sivkdqkkal ktifqdi
//
LOCUS       WP_235183665             315 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: 3-hydroxyacyl-CoA dehydrogenase NAD-binding
            domain-containing protein [Sulfitobacter].
ACCESSION   WP_235183665
VERSION     WP_235183665.1
KEYWORDS    RefSeq.
SOURCE      Sulfitobacter
  ORGANISM  Sulfitobacter
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae.
REFERENCE   1  (residues 1 to 315)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02737.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Sulfitobacter"
                     /db_xref="taxon:60136"
     Protein         1..315
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /GO_function="GO:0070403 - NAD+ binding [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=33329
     Region          12..303
                     /region_name="PRK07066"
                     /note="L-carnitine dehydrogenase"
                     /db_xref="CDD:168796"
ORIGIN      
        1 mtdttsmmpp ctvavigcgl igaswaalfq haghtvrawd pdtgardgfa arvagplaql
       61 qeisagaarq galstheslq dalqdvvliq enapenvplk hqlyaqiegi vapdviiass
      121 tsahpwsdlv pgmqhpdrli tahpfnpphl vplvevygpd pqvldwaerf yrslgsapvr
      181 lkkdavghia nrlssalwre avhivaegia dvdavdqalv ngpglrwsvl gahmayhlgg
      241 gaggmagyla hlgpsqqkrw dnlgaptlda dtcarlvdgv sieaagrsia qleaerdaal
      301 ielaqmrkrl adrka
//
LOCUS       WP_235183721             202 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: Hpt domain-containing protein [Sulfitobacter].
ACCESSION   WP_235183721
VERSION     WP_235183721.1
KEYWORDS    RefSeq.
SOURCE      Sulfitobacter
  ORGANISM  Sulfitobacter
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae.
REFERENCE   1  (residues 1 to 202)
  AUTHORS   Porter,S.W., Xu,Q. and West,A.H.
  TITLE     Ssk1p response regulator binding surface on histidine-containing
            phosphotransfer protein Ypd1p
  JOURNAL   Eukaryot Cell 2 (1), 27-33 (2003)
   PUBMED   12582120
REFERENCE   2  (residues 1 to 202)
  AUTHORS   Kato,M., Mizuno,T., Shimizu,T. and Hakoshima,T.
  TITLE     Insights into multistep phosphorelay from the crystal structure of
            the C-terminal HPt domain of ArcB
  JOURNAL   Cell 88 (5), 717-723 (1997)
   PUBMED   9054511
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013767.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01627.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Sulfitobacter"
                     /db_xref="taxon:60136"
     Protein         1..202
                     /product="Hpt domain-containing protein"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=23005
     Region          <44..154
                     /region_name="HPtr"
                     /note="HPt (histidine-containing phosphotransfer) domain
                     [Signal transduction mechanisms]; COG2198"
                     /db_xref="CDD:441800"
ORIGIN      
        1 mqraivdnhs cfdrakplrr lwsgnffnlv lqhtqafdnf tpslandrlr fgeaqkflsd
       61 drparfvknf aphwpekege svidweqvat lqtavgrddf stimcvffke veeanaqltm
      121 dvttdqfrdi lhfvkgsals vgfvelseqc aqaegnfags hqitsiwkei ltsyekskeh
      181 flsntgtcia pieqieprfr hs
//
LOCUS       WP_235182864              97 aa            linear   BCT 02-MAR-2025
DEFINITION  thiolase C-terminal domain-containing protein [Gracilibacillus
            boraciitolerans].
ACCESSION   WP_235182864
VERSION     WP_235182864.1
KEYWORDS    RefSeq.
SOURCE      Gracilibacillus boraciitolerans
  ORGANISM  Gracilibacillus boraciitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Gracilibacillus.
REFERENCE   1  (residues 1 to 97)
  AUTHORS   Brown,A.K., Sridharan,S., Kremer,L., Lindenberg,S., Dover,L.G.,
            Sacchettini,J.C. and Besra,G.S.
  TITLE     Probing the mechanism of the Mycobacterium tuberculosis
            beta-ketoacyl-acyl carrier protein synthase III mtFabH: factors
            influencing catalysis and substrate specificity
  JOURNAL   J Biol Chem 280 (37), 32539-32547 (2005)
   PUBMED   16040614
REFERENCE   2  (residues 1 to 97)
  AUTHORS   Kursula,P., Ojala,J., Lambeir,A.M. and Wierenga,R.K.
  TITLE     The catalytic cycle of biosynthetic thiolase: a conformational
            journey of an acetyl group through four binding modes and two
            oxyanion holes
  JOURNAL   Biochemistry 41 (52), 15543-15556 (2002)
   PUBMED   12501183
REFERENCE   3  (residues 1 to 97)
  AUTHORS   Scarsdale,J.N., Kazanina,G., He,X., Reynolds,K.A. and Wright,H.T.
  TITLE     Crystal structure of the Mycobacterium tuberculosis
            beta-ketoacyl-acyl carrier protein synthase III
  JOURNAL   J Biol Chem 276 (23), 20516-20522 (2001)
   PUBMED   11278743
REFERENCE   4  (residues 1 to 97)
  AUTHORS   Modis,Y. and Wierenga,R.K.
  TITLE     Crystallographic analysis of the reaction pathway of Zoogloea
            ramigera biosynthetic thiolase
  JOURNAL   J Mol Biol 297 (5), 1171-1182 (2000)
   PUBMED   10764581
REFERENCE   5  (residues 1 to 97)
  AUTHORS   Mathieu,M., Modis,Y., Zeelen,J.P., Engel,C.K., Abagyan,R.A.,
            Ahlberg,A., Rasmussen,B., Lamzin,V.S., Kunau,W.H. and Wierenga,R.K.
  TITLE     The 1.8 A crystal structure of the dimeric peroxisomal
            3-ketoacyl-CoA thiolase of Saccharomyces cerevisiae: implications
            for substrate binding and reaction mechanism
  JOURNAL   J Mol Biol 273 (3), 714-728 (1997)
   PUBMED   9402066
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047238.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22691.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Gracilibacillus boraciitolerans"
                     /db_xref="taxon:307521"
     Protein         1..97
                     /product="thiolase C-terminal domain-containing protein"
                     /calculated_mol_wt=10329
     Region          <1..94
                     /region_name="cond_enzymes"
                     /note="Condensing enzymes; Family of enzymes that catalyze
                     a (decarboxylating or non-decarboxylating) Claisen-like
                     condensation reaction. Members are share strong structural
                     similarity, and are involved in the synthesis and
                     degradation of fatty acids, and the...; cl09938"
                     /db_xref="CDD:447866"
ORIGIN      
        1 mdllslydcy tsvvatqles igicaqgqfs kfvrdhtfdh tgdfplnthg gqlgfgqadl
       61 aggmshviea vvqlrgeage rqipnighal vtgmvrr
//
LOCUS       WP_235183138              98 aa            linear   BCT 02-MAR-2025
DEFINITION  V-type ATPase subunit subunit G family protein [Deinococcus
            phoenicis].
ACCESSION   WP_235183138
VERSION     WP_235183138.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus phoenicis
  ORGANISM  Deinococcus phoenicis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
REFERENCE   1  (residues 1 to 98)
  AUTHORS   Stewart,A.G., Lee,L.K., Donohoe,M., Chaston,J.J. and Stock,D.
  TITLE     The dynamic stator stalk of rotary ATPases
  JOURNAL   Nat Commun 3, 687 (2012)
   PUBMED   22353718
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 98)
  AUTHORS   Lau,W.C. and Rubinstein,J.L.
  TITLE     Subnanometre-resolution structure of the intact Thermus
            thermophilus H+-driven ATP synthase
  JOURNAL   Nature 481 (7380), 214-218 (2011)
   PUBMED   22178924
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 98)
  AUTHORS   Lee,L.K., Stewart,A.G., Donohoe,M., Bernal,R.A. and Stock,D.
  TITLE     The structure of the peripheral stalk of Thermus thermophilus
            H+-ATPase/synthase
  JOURNAL   Nat Struct Mol Biol 17 (3), 373-378 (2010)
   PUBMED   20173764
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028309.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16999.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Deinococcus phoenicis"
                     /db_xref="taxon:1476583"
     Protein         1..98
                     /product="V-type ATPase subunit subunit G family protein"
                     /calculated_mol_wt=10506
     Region          1..98
                     /region_name="V-ATPase_G_2"
                     /note="Vacuolar (H+)-ATPase G subunit; pfam16999"
                     /db_xref="CDD:339878"
ORIGIN      
        1 mselasreaa ldaqieaare earrsveaae aeaarilaqa qtqaqalqae hdqqlaaetq
       61 rirdearara eegaqatrar agsrvqqaae yilravlp
//
LOCUS       WP_235183764             150 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6497 family protein [Sulfitobacter].
ACCESSION   WP_235183764
VERSION     WP_235183764.1
KEYWORDS    RefSeq.
SOURCE      Sulfitobacter
  ORGANISM  Sulfitobacter
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040445.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20107.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Sulfitobacter"
                     /db_xref="taxon:60136"
     Protein         1..150
                     /product="DUF6497 family protein"
                     /calculated_mol_wt=15947
     Region          40..150
                     /region_name="DUF6497"
                     /note="Family of unknown function (DUF6497); pfam20107"
                     /db_xref="CDD:437939"
ORIGIN      
        1 mvtdhpslsa slpfglhpag aalkwlavca afatasaaaq pvevpsgesi elqevlidev
       61 gvqtwlrfrf vapyiardtg avdfaqvgad mtylcdalai pymaqhaldg evivisladr
      121 vtefgvsdpd atqffeafrl sndtciwegl
//
LOCUS       WP_235183677             681 aa            linear   BCT 02-MAR-2025
DEFINITION  HAD family hydrolase [Sulfitobacter sp. CB2047].
ACCESSION   WP_235183677
VERSION     WP_235183677.1
KEYWORDS    RefSeq.
SOURCE      Sulfitobacter sp. CB2047
  ORGANISM  Sulfitobacter sp. CB2047
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Sulfitobacter.
REFERENCE   1  (residues 1 to 681)
  AUTHORS   Lunn,J.E., Ashton,A.R., Hatch,M.D. and Heldt,H.W.
  TITLE     Purification, molecular cloning, and sequence analysis of
            sucrose-6F-phosphate phosphohydrolase from plants
  JOURNAL   Proc Natl Acad Sci U S A 97 (23), 12914-12919 (2000)
   PUBMED   11050182
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016972.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05116.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Sulfitobacter sp. CB2047"
                     /db_xref="taxon:1525218"
     Protein         1..681
                     /product="HAD family hydrolase"
                     /calculated_mol_wt=73349
     Region          1..413
                     /region_name="sucr_P_syn_N"
                     /note="sucrose-phosphate synthase, putative,
                     glycosyltransferase domain; TIGR02472"
                     /db_xref="CDD:131525"
     Region          442..671
                     /region_name="S6PP"
                     /note="Sucrose-6F-phosphate phosphohydrolase; pfam05116"
                     /db_xref="CDD:428314"
ORIGIN      
        1 mrimhislgg clsappvkyg mtedtgghia yvlgaamaqa klpeveevti vtrlfdapel
       61 gvvfaqaeer iapkcrvvrl asdwaeylek gdlvgelpsl qnalletlea mgaarpdvih
      121 ahfadaaela laarerfgip vlytahslga eklgpgevas aelkariare tralaeadai
      181 iassrdever qipklvpaae grahrigpgv cveaqgdaar aremldgflr dvskpiilai
      241 arpirkknlr rlvdayasdr tlqeranlvi iaglrdglgq gcterdavia dlfdgvdrhd
      301 lwgkvalprq hsaqdisdly alaaeggvfc npafhepfgl tlieaaqvgv plvatqsggp
      361 sdilpelgfg alidpydtas larglrdvlt aperelatrr aqrvarhtyd wtawakrtqv
      421 vmegvvrgpq vqsvavqqqe hllacdidnt ltgcrngara faqwlgrege scaftaatgr
      481 siaeaqrvla ewdlptpdti isstgteiwr rsgsgfalce eyvamipqdw daaavraale
      541 gttvrfqpvy dqrrwkvslf gtisdvpaie arlhqagvla riipshekfi diipvqagka
      601 aairfeaarr gmsddsviva gdsgndldml srfenavlpa nalaeldgla svyrsslkha
      661 agvldgvqyy rtpqpmlmag e
//
LOCUS       WP_235183834            3023 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF637 domain-containing protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_235183834
VERSION     WP_235183834.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04830.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..3023
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..3023
                     /product="DUF637 domain-containing protein"
     Region          1..>1259
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          10..28
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          30..49
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          51..70
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          72..91
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          93..112
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          114..131
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          134..153
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          155..174
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          176..195
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          197..216
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          221..259
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          262..282
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          284..302
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          304..323
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          325..366
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          368..386
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          388..408
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          410..427
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          430..448
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          450..469
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          471..489
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          491..511
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          518..532
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          535..554
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          556..575
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          577..594
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          621..639
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          641..661
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          663..682
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          684..702
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          704..723
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          726..743
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          746..764
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          767..787
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          790..809
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          811..830
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          853..873
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          875..893
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          895..914
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          916..934
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          936..960
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          962..979
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          982..1003
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1005..1024
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1026..1046
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1068..1084
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1106..1144
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1146..1165
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1167..1184
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1186..1205
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1243..1259
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1960..1985
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1986..2003
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2005..2024
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2026..2046
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2048..2068
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2070..2089
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2091..2105
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2197..2332
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          2446..2603
                     /region_name="DUF637"
                     /note="Possible hemagglutinin (DUF637); pfam04830"
                     /db_xref="CDD:428148"
ORIGIN      
        1 adtldnsqsg liaanggiai earqvdnrag eisstskvav nareqldnrg gkvigdsglr
       61 ltvqrllnqa kgvlagrdgl sldggelfng dggrldsqns lsvslggvld nqggalvseg
      121 sltaraarld nrggtfssag alaltsqaal dnqggrllsd agvtlqgasl dnsrsgvisa
      181 kgavdirtgv ldnsrnggig snagitlvaa rldngqqgrv sakglldanl kgldqrgggv
      241 lvsetgvtld lnggtlvnrd ggliatpgal llrqlgavdn gaggeissdr aftlaaasld
      301 nrggrligaa sltlriaqal dnslggvisg aagldiaaar ldnsakgtla sragidlrvd
      361 galdnhaegt vsgarltlas asldnsgkgl lsgnaglsvv tgaldnaegg qlisqgvldv
      421 ssadldnrgg alsgkqslrl saanldnrgg lltsdgelel tagrvdsadg geisargdlr
      481 ltverlvqrq grligergvs ldlrggdldn qgglisargp lsierlnvld nrqggeissq
      541 qgfellarri dngqqgriis agklrldada lgnagaglls gwqgltvtgg sldnsaggtl
      601 sskdgelais lggaldnhgq galvskgaqr idaasldnaq givsgesdvt lsiagkldng
      661 qgglvsaqra lsferddtll nnaggringg slllkgasld nsdgqlisqg rldailggal
      721 vnagaarlas ggdlllrsas vdnrggklvs qglleisags ldnsasgtla sqagmslrlg
      781 ggalrnqqdg lifsqagald vqagsldnrq gtlqaqgdnq lriggaldnq ggrldsragn
      841 ldlqsgsldn gaggvlnsak gwlklvtglf dnsagvtqaq sleiragqgv rnqqghlsal
      901 ggdnrivtad fdnqggglya sgllsldgqr flnqgaaagq ggkvgagrid fslagalanr
      961 fgqlesesel hlraaaidns ggslralgrs gstrlvagdl nnaygvlesa nqdldlqlgs
     1021 lanaggrilh tgngtfglds gqviraggel ttnglldira sewtnssvlq agrlnldigt
     1081 frqtaegkll avqsftgrgg dwsndgllas dgslrlelsg gyrgngrats lgdfalnaas
     1141 ldlgnaasla gganvtlgag nllvnrgrit aagdlvasaa slnnygtlgg ggnlrlnapa
     1201 llnergllfs gadmtlragd itnlygdvys lgrldiardd ssgkvssfkn isasvessnd
     1261 lrllaevven kkeifdvsse flsgaigvrc fdcsavggke dkfashlvll enyktqllkd
     1321 spssnitsgg nifilggrlk nqgstiaaag disisaqdfa negyvlgeys vrkaldfnys
     1381 yearvevwrk imeynsindl aydngkieys nfggaihfwn knwdesivds vyfrtggrdg
     1441 ywhagfgtiv iddiardkfd yisvapaydp srgalppdfl rnakvfdelt isksdvapva
     1501 navvqaggkv sinaerslqn sivregqpis rgveknlltg lsgntsnvvv lsqalppdla
     1561 rkqinpltlp gfslpqgqng lfrlasqgaq vnqasgalks asdltqsghg vsvsaqagsd
     1621 asgwstqarr vgddrvtsla gsayqgrvae aidalrasap isgdggntgr fqagehqatt
     1681 glgglvegna sghsgngvil adlrgglpsf sslpaadrvq gtvpghdgng tilanwqgaq
     1741 atvqaspstv rvegvvsspg gngsilaglp aeqssvqalp savraqgslp rleersavla
     1801 eppvgqpalq tlpsvarveg vpsnatpsns hkylietnpa ltelkqflns dyllgglgin
     1861 pddskkrlgd glyeqrlvre aivqrtgqrf iaglnsdeam frylmdnaia skdvlgltpg
     1921 vtlsaaqvaa lthdivwlee vevngekvla pvvylaqaeg rlgpngaliq grdvnlitgg
     1981 dlrnagtlra qndlsatagn idnsglieag nrldllasgs irndqggiia grevslsalt
     2041 gdvinertvt qhqssyrgtg tteafadsaa rieaaqkltv sagrdvanig gvidskgdla
     2101 lqggrdvlvs aavaergwta gsqayqtqtt qmgaevvagr disvsagrdi svagsridar
     2161 rdvtfeagrd vglvaaanee haygktkkvt fqddkitqqa trvdaggdla inagqdlrlv
     2221 asqasagdea ylvagdklel laandssyyl ydkkskgsfg skktrrdeit dvtavgsqis
     2281 sggdltllsg gdqtyqgakl esgndlaivs ggavtfdavk dlhqesheks kgdlawqssk
     2341 gkgqtdetvr qsqlvaqgnl aikaveglki dlkhidqktv sqtidamvqa dpqlawlkea
     2401 eqrgdvdwrm vqevhdswky snsglgaaps laiaivavay lgpvygamas nlaigtinng
     2461 gdlgkglqqa tsadslkgya iaaataylvs pqldkafgvs sdninkvtkg fklstvegig
     2521 gfaaysiaqg faqsvmqqaa yggsyidnlg namagqarnl gmavgfnfig dsvkypdgsp
     2581 pkimahalmg gllaeasgsd fktgaaaaga neaminllgk mvggdqnlel masqlvgvaa
     2641 asavngdvsl gaeiaksgta ynrqlhpdei kfasdvkrvk ryaqenglse dtarkellst
     2701 aammvdngws qalagtdina araaqylrte lgtgpdsnlf qvtqadyyne rvgltalfkn
     2761 kealtsvlen ialanpasyt rdpanraevl nakgegsqag fglalegivs apsktalwlm
     2821 galtcsscae rdiqnawnsv aslpedirmk gyldalhtmq gqgasvvrdn aasstalgve
     2881 vglaidggla gagkgvvtdg pkeipkdlgk vsfdasngvg tiysprvtln sgeiifdgfs
     2941 vgtskgligv gadgaaelvg plrkmlsysq sqgaqtitlk ghyaseqgsm lgtgsvnnvn
     3001 qkfsfsfpat tdglkaflke lgk
//
LOCUS       WP_235183851             234 aa            linear   BCT 02-MAR-2025
DEFINITION  glucosaminidase domain-containing protein [Campylobacter
            iguaniorum].
ACCESSION   WP_235183851
VERSION     WP_235183851.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter iguaniorum
  ORGANISM  Campylobacter iguaniorum
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 234)
  AUTHORS   Nambu,T., Minamino,T., Macnab,R.M. and Kutsukake,K.
  TITLE     Peptidoglycan-hydrolyzing activity of the FlgJ protein, essential
            for flagellar rod formation in Salmonella typhimurium
  JOURNAL   J Bacteriol 181 (5), 1555-1561 (1999)
   PUBMED   10049388
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013954.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01832.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Campylobacter iguaniorum"
                     /db_xref="taxon:1244531"
     Protein         1..234
                     /product="glucosaminidase domain-containing protein"
                     /GO_function="GO:0004040 - amidase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=26865
     Region          4..233
                     /region_name="Bax"
                     /note="Uncharacterized FlgJ-related protein [General
                     function prediction only]; cl27488"
                     /db_xref="CDD:474928"
ORIGIN      
        1 mirlfisfif vvslafggfp qsyyrldike qkaqfattia rltqnanqst sqkrqfalty
       61 lnfiykqsfr dldsqnlsrl lqiakeykiv nlfdeneyik klsnvpisla iaqgavesgw
      121 gksrfakean nifghwtwgq kglvplnrde nkthkirifn slqdsvdayv lnlnshpaya
      181 sfrdarlena knglkyggle aaqtmekysq mgriyvkqle ktinlydltk fded
//
LOCUS       WP_417281871             329 aa            linear   BCT 02-MAR-2025
DEFINITION  c-type cytochrome biogenesis protein CcsB [Amnibacterium
            endophyticum].
ACCESSION   WP_417281871
VERSION     WP_417281871.1
KEYWORDS    RefSeq.
SOURCE      Amnibacterium endophyticum
  ORGANISM  Amnibacterium endophyticum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Amnibacterium.
REFERENCE   1  (residues 1 to 329)
  AUTHORS   Feissner,R.E., Beckett,C.S., Loughman,J.A. and Kranz,R.G.
  TITLE     Mutations in cytochrome assembly and periplasmic redox pathways in
            Bordetella pertussis
  JOURNAL   J Bacteriol 187 (12), 3941-3949 (2005)
   PUBMED   15937156
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: TIGR03144.1
            Evidence Source    :: JCVI
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Amnibacterium endophyticum"
                     /db_xref="taxon:2109337"
     gene            1..329
                     /gene="ccsB"
     Protein         1..329
                     /product="c-type cytochrome biogenesis protein CcsB"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /GO_process="GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /calculated_mol_wt=35506
     Region          85..323
                     /region_name="Cytochrom_C_asm"
                     /note="Cytochrome C assembly protein; cl00504"
                     /db_xref="CDD:444942"
ORIGIN      
        1 mpvnpldqls elllvsaiav yamafiafal dlarrsaaaq avsaplvree sraergggta
       61 vlvaeppaap pseprrtsar vglaltvval vlhagavvlr gvaagrvpwa nmyefsmtgt
      121 lvmvlvflgv ltridlrflg svitgfvvll lgiatvgfhv evsplqpalq sywlvlhvlv
      181 ailgtgfftl aaalsavqll qvrrqrqvda grperlklla tvptadrlen layrisvvgf
      241 ilwtftliag aiwadhawgr ywgwdtkevw tfiiwvvyag ylharatlgw rgtgsawlnl
      301 igyacilfnf gvvnvffkgl htysglptg
//
LOCUS       WP_235183901             406 aa            linear   BCT 02-MAR-2025
DEFINITION  NTP transferase domain-containing protein [Hymenobacter sp.
            IS2118].
ACCESSION   WP_235183901
VERSION     WP_235183901.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter sp. IS2118
  ORGANISM  Hymenobacter sp. IS2118
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024214.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12804.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Hymenobacter sp. IS2118"
                     /db_xref="taxon:1505605"
     Protein         1..406
                     /product="NTP transferase domain-containing protein"
                     /calculated_mol_wt=43815
     Region          <112..404
                     /region_name="PRK14490"
                     /note="putative bifunctional molybdopterin-guanine
                     dinucleotide biosynthesis protein MobB/MobA; Provisional"
                     /db_xref="CDD:237728"
ORIGIN      
        1 mdssptptak rskhaalarp dlgefgrhel ailgapcgdi qalvahllph lapalrmayv
       61 dadhaairaa deaaataaag vplhlaapat sptlgengls aelvdyvayr elrtrrpldr
      121 fsqpellahe svvlvngnhf rarqqvvivd prkpldkkld rltdvrlill adgqtdlpag
      181 laqhlsaapl ppvlrlsdta giaafirqwy llavpvlrgl vlaggrserm qtdkgalhyh
      241 aldqrqhtaa llgefcpdvr vsvrpdqaaa lpaglkplpd tflnlgplgg llsafqadpn
      301 aawlvlacdl pfltrttldf lvtnrqpara atalrspwnd fpeplvtiwe prsygqllrf
      361 lglgyscprk alinsdiell tppvpeelrn vntpeeraaa erelig
//
LOCUS       WP_235183910             153 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6970 domain-containing protein [Hymenobacter sp. IS2118].
ACCESSION   WP_235183910
VERSION     WP_235183910.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter sp. IS2118
  ORGANISM  Hymenobacter sp. IS2118
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047150.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22311.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Hymenobacter sp. IS2118"
                     /db_xref="taxon:1505605"
     Protein         1..153
                     /product="DUF6970 domain-containing protein"
                     /calculated_mol_wt=16308
ORIGIN      
        1 mknllafaac allaaacapn qvsvttpttp pssgyasgpd tpvptsantv dpvparvavs
       61 dttarpawlk ariaevlser krnpitrmls ytydgqqvyy isapccdqys qvfdakgrlv
      121 cqpdggitgk gdgqcpdfek nktneklvwq dpr
//
LOCUS       WP_235183926             370 aa            linear   BCT 02-MAR-2025
DEFINITION  outer membrane beta-barrel protein [Hymenobacter sp. IS2118].
ACCESSION   WP_235183926
VERSION     WP_235183926.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter sp. IS2118
  ORGANISM  Hymenobacter sp. IS2118
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024957.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13568.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Hymenobacter sp. IS2118"
                     /db_xref="taxon:1505605"
     Protein         1..370
                     /product="outer membrane beta-barrel protein"
                     /calculated_mol_wt=40263
     Region          <221..351
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mllfgglnva satslttsap vakdtivirl pnqatitlvv rdaaqlrqmk tyqldsltsr
       61 lagyitqaet aaknatsdqv tvqfypdkdq pgqnlpeqir itthkktasr sssngvvvll
      121 nkkfglditt dddgntavks tkskarkiae sdsirlhnie kdrsnfifdl glnalvnqqn
      181 ggatgsdasv dlrtggsryv nigfnyetrl ggkrspvgll igpefafnnf mlngnnkwvn
      241 adgrtsvvke idgrefqksk lttasinvpl mlqlkfrdsh hqptfhvaag gfvgyrlgah
      301 tklkyiedgn tdkekdagsy nlenflygaq gtigfgslef fgkynmndlf knnagpkaqv
      361 vsfgirffgn
//
LOCUS       WP_235183954              76 aa            linear   BCT 02-MAR-2025
DEFINITION  protein YvfG [Exiguobacterium undae].
ACCESSION   WP_235183954
VERSION     WP_235183954.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium undae
  ORGANISM  Exiguobacterium undae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis; Exiguobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021167.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09628.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Exiguobacterium undae"
                     /db_xref="taxon:169177"
     gene            1..76
                     /gene="yvfG"
     Protein         1..76
                     /product="protein YvfG"
                     /calculated_mol_wt=8814
ORIGIN      
        1 mrpvneqlft terlmsnfre ytrqneahmt tiqalnayyk vvagsiladr iaknadlivr
       61 mrhleeayqk vaqetr
//
LOCUS       WP_235183967             288 aa            linear   BCT 02-MAR-2025
DEFINITION  nitrilase-related carbon-nitrogen hydrolase [Hymenobacter sp.
            IS2118].
ACCESSION   WP_235183967
VERSION     WP_235183967.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter sp. IS2118
  ORGANISM  Hymenobacter sp. IS2118
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 288)
  AUTHORS   Pace,H.C. and Brenner,C.
  TITLE     The nitrilase superfamily: classification, structure and function
  JOURNAL   Genome Biol 2 (1), REVIEWS0001 (2001)
   PUBMED   11380987
REFERENCE   2  (residues 1 to 288)
  AUTHORS   Bork,P. and Koonin,E.V.
  TITLE     A new family of carbon-nitrogen hydrolases
  JOURNAL   Protein Sci 3 (8), 1344-1346 (1994)
   PUBMED   7987228
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012993.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00795.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Hymenobacter sp. IS2118"
                     /db_xref="taxon:1505605"
     Protein         1..288
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /GO_process="GO:0008152 - metabolic process [Evidence
                     IEA]"
                     /calculated_mol_wt=32727
     Region          3..288
                     /region_name="ML_beta-AS_like"
                     /note="mammalian-like beta-alanine synthase (beta-AS) and
                     similar proteins (class 5 nitrilases); cd07568"
                     /db_xref="CDD:143592"
     Site            order(53,126,130,137,163..164,166..167,188)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:143592"
     Site            order(53,126,163)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:143592"
     Site            order(62..65,67,70,101,105,107,115,117,119,121,127..129,
                     131..133,136,138..152,157,164,167..171,173..174,177..178,
                     191,193,195..197,199..201,203..204,207..208,241,265..266,
                     268..280,282..283,285..287)
                     /site_type="other"
                     /note="multimer interface [polypeptide binding]"
                     /db_xref="CDD:143592"
     Site            order(115,117,119,121,127..129,131..132,143..144,146..152,
                     157,164,167..171,173..174,177..178,191,193,195..197,
                     199..201,203..204,207..208,241,270..273,276..280,282..283,
                     285..287)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143592"
ORIGIN      
        1 mprmiksgli qmslpmtege gtieeikaam eakhipliee agrqgvqilc lqeifntpyf
       61 cpgqdknwya saeavpgptt drmaeyakky nmvmivpvye reaagflynt aavidadgty
      121 lgkyrknhip httgfwekff fkpgnlgypv fqtkyakvgv yicydrhfpd garvlglnga
      181 eivynpsatv aglsqylwkl eqpahaaang yfmgcinrvg eekpwnlgrf ygtsyfvdpr
      241 gqiiaqadey kdelliadfd ldmieevrnt wqffrdrrpe tyeklvel
//
LOCUS       WP_235183980             163 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Exiguobacterium
            undae].
ACCESSION   WP_235183980
VERSION     WP_235183980.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium undae
  ORGANISM  Exiguobacterium undae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis; Exiguobacterium.
REFERENCE   1  (residues 1 to 163)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 163)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 163)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 163)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Exiguobacterium undae"
                     /db_xref="taxon:169177"
     Protein         1..163
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=18453
     Region          1..163
                     /region_name="L_ocin_972_ABC"
                     /note="putative bacteriocin export ABC transporter,
                     lactococcin 972 group; TIGR03608"
                     /db_xref="CDD:188353"
ORIGIN      
        1 mniigllenc egdvilkgkt yndihsksar kvlekeigyl fqnfaliddf tvyenlnivf
       61 nkkskkerrd vmdqelkklg lehvldkpiy qlsggeqqrv alvrlilses eiiladeptg
      121 sldrensdli lnqlktlnae gktiimvshd knafsycsri vnl
//
LOCUS       WP_235183991             369 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Exiguobacterium undae].
ACCESSION   WP_235183991
VERSION     WP_235183991.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium undae
  ORGANISM  Exiguobacterium undae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis; Exiguobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Exiguobacterium undae"
                     /db_xref="taxon:169177"
     Protein         1..369
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=40349
     Region          35..348
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(44,94..95,97..99,102,126,129..130,133,204,207..208,
                     211..213,216,238,242,291..292,296,300,316,319..320,
                     323..324,327)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mirfatacip ayvierlfwe qrgmtiqdvi yaeivfaltl vvleipfgli vdrfgrkmgm
       61 iigtsfecls flvllhafsl ssflfamvla gigtaaisgt edallyesmq qtgasdrfeq
      121 tvgrmnavgl gtaggaallg awlaqsfdli thyylsfgfl vcavlascll sdthsarpat
      181 ertndsgwnr llkipafvri vlftvmfgtt itfldefwql yvrdqgiavs wfgiilislm
      241 taqgmgnllp kptrpytvlc ywlllymsgi illaviegrw svllligifl iygwsepvlt
      301 tflqdclpdg rratgsstvs fveslatmaa glgfghisqt iglngayfyl gltglllglg
      361 mmfvlrirg
//
LOCUS       WP_235184100             231 aa            linear   BCT 02-MAR-2025
DEFINITION  Tn3 family transposase [Hymenobacter sp. IS2118].
ACCESSION   WP_235184100
VERSION     WP_235184100.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter sp. IS2118
  ORGANISM  Hymenobacter sp. IS2118
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 231)
  AUTHORS   Yurieva,O. and Nikiforov,V.
  TITLE     Catalytic center quest: comparison of transposases belonging to the
            Tn3 family reveals an invariant triad of acidic amino acid residues
  JOURNAL   Biochem Mol Biol Int 38 (1), 15-20 (1996)
   PUBMED   8932514
REFERENCE   2  (residues 1 to 231)
  AUTHORS   Fennewald,M.A., Gerrard,S.P., Chou,J., Casadaban,M.J. and
            Cozzarelli,N.R.
  TITLE     Purification of the Tn3 transposase and analysis of its binding to
            DNA
  JOURNAL   J Biol Chem 256 (10), 4687-4690 (1981)
   PUBMED   6262296
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013676.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01526.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Hymenobacter sp. IS2118"
                     /db_xref="taxon:1505605"
     Protein         1..231
                     /product="Tn3 family transposase"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=25413
     Region          <74..231
                     /region_name="transpos_Tn3"
                     /note="Tn3 family transposase; NF033527"
                     /db_xref="CDD:468061"
ORIGIN      
        1 mlehlarlva wqqvglpael arrvhqnrll knspgrrtey trrpgqvrag aspshaggpg
       61 pgrhghqrgr tarpaqlfwl qgwhirndiy tlalaelvna qlrhpfaahw atvpprrrmg
      121 sgfalgagpk apgtsilqyg aepgllfyth vsdqyapvss qvlnvgvrda tyvldgllyh
      181 esdlriaehy tdtagftdhl favmpllsyr fasrirdlsd tklylspgsa a
//
LOCUS       WP_235183942             397 aa            linear   BCT 02-MAR-2025
DEFINITION  glutathionylspermidine synthase family protein [Exiguobacterium
            undae].
ACCESSION   WP_235183942
VERSION     WP_235183942.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium undae
  ORGANISM  Exiguobacterium undae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis; Exiguobacterium.
REFERENCE   1  (residues 1 to 397)
  AUTHORS   Pai,C.H., Chiang,B.Y., Ko,T.P., Chou,C.C., Chong,C.M., Yen,F.J.,
            Chen,S., Coward,J.K., Wang,A.H. and Lin,C.H.
  TITLE     Dual binding sites for translocation catalysis by Escherichia coli
            glutathionylspermidine synthetase
  JOURNAL   EMBO J 25 (24), 5970-5982 (2006)
   PUBMED   17124497
REFERENCE   2  (residues 1 to 397)
  AUTHORS   Bollinger,J.M. Jr., Kwon,D.S., Huisman,G.W., Kolter,R. and
            Walsh,C.T.
  TITLE     Glutathionylspermidine metabolism in Escherichia coli.
            Purification, cloning, overproduction, and characterization of a
            bifunctional glutathionylspermidine synthetase/amidase
  JOURNAL   J Biol Chem 270 (23), 14031-14041 (1995)
   PUBMED   7775463
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015683.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03738.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Exiguobacterium undae"
                     /db_xref="taxon:169177"
     Protein         1..397
                     /product="glutathionylspermidine synthase family protein"
                     /calculated_mol_wt=45096
     Region          5..386
                     /region_name="GSP_synth"
                     /note="Glutathionylspermidine synthase preATP-grasp;
                     cl23821"
                     /db_xref="CDD:474069"
ORIGIN      
        1 mesfwdvldg evyalteamp vpketidnlr taardaysif ekvipilwtm ddeglielgf
       61 pkvalpflrl qtmrplsiis rfdfivsgek isvmewnadt ptfikesfev ndriaekvgl
      121 dsindgqskq laesvrrave aaehrmnqvp hvvftshgdn iedrwtteyl qrfvagatyc
      181 plneleirae dglydqqgrr idilyrqtfp iemalldrde ngrelgvlll qlvemgllei
      241 inppsaflmq aksvlaliwl lhetsheylt aaehdiiery flptylepta flerhqafve
      301 kpifgregdt vtihqgngav mysneqrsfa dqsavyqqyq plptwqlqdg aevaymfgvf
      361 vlggrpsavg vrageritgn rsyflpigqh knqeedg
//
LOCUS       WP_235184177             119 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Agrilactobacillus composti].
ACCESSION   WP_235184177
VERSION     WP_235184177.1
KEYWORDS    RefSeq.
SOURCE      Agrilactobacillus composti
  ORGANISM  Agrilactobacillus composti
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Agrilactobacillus.
REFERENCE   1  (residues 1 to 119)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Agrilactobacillus composti"
                     /db_xref="taxon:398555"
     Protein         1..119
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=13253
     Region          <5..119
                     /region_name="YdeN"
                     /note="Predicted esterase of the alpha/beta hydrolase fold
                     [General function prediction only]; COG3545"
                     /db_xref="CDD:442766"
ORIGIN      
        1 mnltinenti lighsagtni ilalleqlks pvravylvag ysqpngmeht tlkatydwat
       61 iktnskdfym lnsfndpfnc denqgrilfd hlggtlilrn dghftseqlp llhtllsqy
//
LOCUS       WP_235184244             173 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Agrilactobacillus
            composti].
ACCESSION   WP_235184244
VERSION     WP_235184244.1
KEYWORDS    RefSeq.
SOURCE      Agrilactobacillus composti
  ORGANISM  Agrilactobacillus composti
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Agrilactobacillus.
REFERENCE   1  (residues 1 to 173)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 173)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 173)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 173)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Agrilactobacillus composti"
                     /db_xref="taxon:398555"
     Protein         1..173
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=18958
     Region          2..>147
                     /region_name="NatA"
                     /note="ABC-type Na+ transport system, ATPase component
                     NatA [Energy production and conversion, Inorganic ion
                     transport and metabolism]; COG4555"
                     /db_xref="CDD:443618"
ORIGIN      
        1 mltgpngagk ttllnllttt lvpdageitf tneaqdyfiv phepffydyl tggefldlil
       61 ktrhvfdrlp aaqqlcvqtn lanaldyqii tyslgmrkkl iliagllsga ktifldealn
      121 gvdveatgil maqmlqtsrt sliilishet elrpypytgi lslqngqlqq lpt
//
LOCUS       WP_235184275             785 aa            linear   BCT 02-MAR-2025
DEFINITION  family 78 glycoside hydrolase catalytic domain [Agrilactobacillus
            composti].
ACCESSION   WP_235184275
VERSION     WP_235184275.1
KEYWORDS    RefSeq.
SOURCE      Agrilactobacillus composti
  ORGANISM  Agrilactobacillus composti
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Agrilactobacillus.
REFERENCE   1  (residues 1 to 785)
  AUTHORS   Zverlov,V.V., Hertel,C., Bronnenmeier,K., Hroch,A., Kellermann,J.
            and Schwarz,W.H.
  TITLE     The thermostable alpha-L-rhamnosidase RamA of Clostridium
            stercorarium: biochemical characterization and primary structure of
            a bacterial alpha-L-rhamnoside hydrolase, a new type of inverting
            glycoside hydrolase
  JOURNAL   Mol Microbiol 35 (1), 173-179 (2000)
   PUBMED   10632887
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017410.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05592.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Agrilactobacillus composti"
                     /db_xref="taxon:398555"
     Protein         1..785
                     /product="family 78 glycoside hydrolase catalytic domain"
                     /calculated_mol_wt=86986
     Region          239..336
                     /region_name="Bac_rhamnosid"
                     /note="Bacterial alpha-L-rhamnosidase concanavalin-like
                     domain; pfam05592"
                     /db_xref="CDD:336149"
     Region          343..681
                     /region_name="Bac_rhamnosid6H"
                     /note="Bacterial alpha-L-rhamnosidase 6 hairpin
                     glycosidase domain; cl46875"
                     /db_xref="CDD:481215"
     Region          690..755
                     /region_name="Bac_rhamnosid_C"
                     /note="Bacterial alpha-L-rhamnosidase C-terminal domain;
                     pfam17390"
                     /db_xref="CDD:379972"
ORIGIN      
        1 msqpnhflta idhftapgiw aqnqsttpdg rpalgnfafl rspefklpra kidsvyirvl
       61 argnevtlaq sfdlyvnghc vgvgsarphe yyddqdqtay fyqtfeisdq vqsqgnqisv
      121 iatgasklra ffaqvvafes dgtlvellvs daswraldgs safgdfgaki asqyfempqe
      181 nvdmnfypqg fsepdfadka wpaavvtapt vpldgglllp ygaentqrfk taeptkavtk
      241 lapttylvdl gkeiigsltv altspvaqkv niyageqlqa dghvrhhlac gpdyvetwql
      301 iagenqfttl qmknfryvev vgfhgdlsvd aisgwaerqa fddqlgtfes dqpllnqeyd
      361 lskytikatn qdiyvdsqar errayegdll vnanssyvis dnyalarhsa nylldnptwp
      421 edyklfnvem lwydylytgd atllaarydv ikeklkrgat ktdnanaswr pakqadnyde
      481 dlhlvtnngl idwpirerdg yvegtyntpf naiyvgiyqi maqiaavvgq kadqaiyakr
      541 sadlkaamia rlydqkagkf ydslqadltp nthfshhasa yalcygvyds kamadqlaef
      601 vanngefigs iyfiyfmlrg llnsghaqaa srlllndddq kdaktfaail nqlkatiape
      661 awsnyykpnl tlshpwgatp gltivqgiag implepafkr fsvrvqagkv krftlqtpcc
      721 kgliklnyqr ldtmatltlt apanttavit lpdtaqavtv ddqtqtpikn tltvtsgqhi
      781 iryql
//
LOCUS       WP_235184281             369 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Agrilactobacillus composti].
ACCESSION   WP_235184281
VERSION     WP_235184281.1
KEYWORDS    RefSeq.
SOURCE      Agrilactobacillus composti
  ORGANISM  Agrilactobacillus composti
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Agrilactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Agrilactobacillus composti"
                     /db_xref="taxon:398555"
     Protein         1..369
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=40256
     Region          1..342
                     /region_name="glpT"
                     /note="glycerol-3-phosphate transporter; PRK11273"
                     /db_xref="CDD:236889"
ORIGIN      
        1 mgmvsdhsna rvflplglvl aalvnlalgf ipvltssiti mfialfvlgw fqgmgwppsg
       61 rvlvhwysin erggktaiwn vahnvgggfm apiatggial vgsyfaldgf ksyhgafilp
      121 aiiglvvafi afllirdtpe svglppieay rndypnkdhk lfetelttre ilfkyvlnnk
      181 wiwliavani fvylvrygve nwaptyltev khitlasssw syfwyeiagi pgtliagwvs
      241 dkvfkgrrgp agfvfmlvvs afvllymnat nivvinfali migfwiygpv mliglqaldl
      301 vpkkaagtaa gltglfgyff gsfsanaiig ytvdwfgwqa gfglilgasl laaalfaltw
      361 hvrgqtltd
//
LOCUS       WP_235184321             437 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramoyl-L-alanine amidase [Agrilactobacillus composti].
ACCESSION   WP_235184321
VERSION     WP_235184321.1
KEYWORDS    RefSeq.
SOURCE      Agrilactobacillus composti
  ORGANISM  Agrilactobacillus composti
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Agrilactobacillus.
REFERENCE   1  (residues 1 to 437)
  AUTHORS   Kuroda,A., Sugimoto,Y., Funahashi,T. and Sekiguchi,J.
  TITLE     Genetic structure, isolation and characterization of a Bacillus
            licheniformis cell wall hydrolase
  JOURNAL   Mol Gen Genet 234 (1), 129-137 (1992)
   PUBMED   1495475
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013670.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01520.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Agrilactobacillus composti"
                     /db_xref="taxon:398555"
     Protein         1..437
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /EC_number="3.5.1.28"
                     /GO_function="GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=47338
     Region          32..157
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          186..>263
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          252..437
                     /region_name="AmiC"
                     /note="N-acetylmuramoyl-L-alanine amidase [Cell
                     wall/membrane/envelope biogenesis]; COG0860"
                     /db_xref="CDD:440621"
ORIGIN      
        1 mnvnrhffkk yfnmlliava lifassaavv ladqnkievk asivnvrtgp glaydvldkv
       61 ksgtqldimg ekngwyqvrl nmdkigwvas wlvdnteigl ntshqvakln tsnvpiyqqa
      121 danstvlgtg svnasvtvly ttngwtqiky nqsvgwvrst qlnvssastt qaqsaastsd
      181 sgqtvtmltt nqddtklrst pnangtivtv lsndtpltyi ktsgqwyqak tstgqtgyva
      241 nwvvtkrdvn tapivkptsl skativldpg hggsdsgavs asgkfektyt lkvvemvaak
      301 lreaganvvl trstdttvdl akrpkiansi nadafvsfhf dstqtnndas gittyyyntk
      361 kdsalaktms qnlsrlplpn kgtmygnfqv lrdndrpail melgyintak dfkaisseqy
      421 qeavaeavyk glnqyfq
//
LOCUS       WP_235184334             381 aa            linear   BCT 02-MAR-2025
DEFINITION  SLC13 family permease [Agrilactobacillus composti].
ACCESSION   WP_235184334
VERSION     WP_235184334.1
KEYWORDS    RefSeq.
SOURCE      Agrilactobacillus composti
  ORGANISM  Agrilactobacillus composti
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Agrilactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015557.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03600.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Agrilactobacillus composti"
                     /db_xref="taxon:398555"
     Protein         1..381
                     /product="SLC13 family permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=41119
     Region          1..374
                     /region_name="CitM"
                     /note="Mg2+/citrate symporter [Energy production and
                     conversion]; COG2851"
                     /db_xref="CDD:442099"
ORIGIN      
        1 mivvlailmi tvfivllakn klsilgalvl vplffgsiiv iftkatfsdm frwiydalfy
       61 avspdngaat igvvspglli lfaviyfdlm lniglfdplc affirkakgd plkvtmatvl
      121 tativtmngd ttttiiicaa aflelwramh mklmylaili vtpigifnql pwggptiaas
      181 tamgvsvshl fkallpgmla aevfaiglay ylgrkerkrl qwaaemrnei dddflekmvd
      241 airnknpelk rpqyywfnll ltlfilylli advchgailf migtaiiltv nyrdvntinq
      301 qleavagdal gpaaatfgag vfsgiltgsg maaglaggia aiipadlgah iaplyaiisa
      361 paivflpqda fyfaspkllp r
//
LOCUS       WP_235184336             391 aa            linear   BCT 02-MAR-2025
DEFINITION  SpaA isopeptide-forming pilin-related protein, partial
            [Agrilactobacillus composti].
ACCESSION   WP_235184336
VERSION     WP_235184336.1
KEYWORDS    RefSeq.
SOURCE      Agrilactobacillus composti
  ORGANISM  Agrilactobacillus composti
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Agrilactobacillus.
REFERENCE   1  (residues 1 to 391)
  AUTHORS   Kang,H.J., Paterson,N.G., Gaspar,A.H., Ton-That,H. and Baker,E.N.
  TITLE     The Corynebacterium diphtheriae shaft pilin SpaA is built of tandem
            Ig-like modules with stabilizing isopeptide and disulfide bonds
  JOURNAL   Proc Natl Acad Sci U S A 106 (40), 16967-16971 (2009)
   PUBMED   19805181
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2009 Oct 27;106(43):18427]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037639.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17802.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Agrilactobacillus composti"
                     /db_xref="taxon:398555"
     Protein         1..>391
                     /product="SpaA isopeptide-forming pilin-related protein"
     Region          36..>98
                     /region_name="Big_8"
                     /note="Bacterial Ig domain; pfam17961"
                     /db_xref="CDD:465589"
     Region          135..>379
                     /region_name="ClfA"
                     /note="Clumping factor A-related surface protein, MSCRAMM
                     (microbial surface components recognizing adhesive matrix
                     molecules) family, DEv-IgG fold [Cell
                     wall/membrane/envelope biogenesis]; COG4932"
                     /db_xref="CDD:443959"
     Region          285..351
                     /region_name="SpaA"
                     /note="Prealbumin-like fold domain; pfam17802"
                     /db_xref="CDD:465513"
     Region          369..>391
                     /region_name="Cna_B"
                     /note="Cna protein B-type domain; pfam05738"
                     /db_xref="CDD:461726"
ORIGIN      
        1 mtqsvtgvga gdakittasg qdvthepqld lytnytltyn waipdnvain agdtvqitlp
       61 dtvatasdtk inltdstgkv igtvalangq qqgiltfnqn fkaynrhgai vlnvsgkhtd
      121 sghsnpwfvg kngwladndp nkvtdpteii wdiavnpdnk tvnnvvltdt lgpgqtykag
      181 slsattdngd pkttipatvk vngnqltidl gnittrvmvl yrttitnlnp dtgntwtnev
      241 asssagggag tgvattaksq viwgghgsaq gyngsaqltk vdaatntpla gavfalkqgd
      301 kviqanlttd aqgllkvtnl nvgdysfvet kaptgyllda tpinfaitkt nntysnikvt
      361 akdakavtin gtktwddand qakqrptsik v
//
LOCUS       WP_235183808             265 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: protein-disulfide reductase DsbD domain-containing
            protein [Sulfitobacter].
ACCESSION   WP_235183808
VERSION     WP_235183808.1
KEYWORDS    RefSeq.
SOURCE      Sulfitobacter
  ORGANISM  Sulfitobacter
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae.
REFERENCE   1  (residues 1 to 265)
  AUTHORS   Bushweller,J.H.
  TITLE     Protein Disulfide Exchange by the Intramembrane Enzymes DsbB, DsbD,
            and CcdA
  JOURNAL   J Mol Biol 432 (18), 5091-5103 (2020)
   PUBMED   32305461
REFERENCE   2  (residues 1 to 265)
  AUTHORS   Smith,R.P., Whitten,A.E., Paxman,J.J., Kahler,C.M., Scanlon,M.J.
            and Heras,B.
  TITLE     Production, biophysical characterization and initial
            crystallization studies of the N- and C-terminal domains of DsbD,
            an essential enzyme in Neisseria meningitidis
  JOURNAL   Acta Crystallogr F Struct Biol Commun 74 (Pt 1), 31-38 (2018)
   PUBMED   29372905
REFERENCE   3  (residues 1 to 265)
  AUTHORS   Goulding,C.W., Sawaya,M.R., Parseghian,A., Lim,V., Eisenberg,D. and
            Missiakas,D.
  TITLE     Thiol-disulfide exchange in an immunoglobulin-like fold: structure
            of the N-terminal domain of DsbD
  JOURNAL   Biochemistry 41 (22), 6920-6927 (2002)
   PUBMED   12033924
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022853.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11412.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Sulfitobacter"
                     /db_xref="taxon:60136"
     Protein         1..265
                     /product="protein-disulfide reductase DsbD
                     domain-containing protein"
                     /calculated_mol_wt=27715
     Region          34..>262
                     /region_name="COG4233"
                     /note="Thiol-disulfide interchange protein, contains DsbC
                     and DsbD domains [Posttranslational modification, protein
                     turnover, chaperones, Energy production and conversion]"
                     /db_xref="CDD:443377"
ORIGIN      
        1 mtrkilglma aaliaplpas amdvihgeil qgwvlpdgnr maairmtvep gwktywrapg
       61 dmgippsfdw sgsrnlsava vewpaptvfr epnlttigyk dqvvlplris vpdkgapvtv
      121 qttidlgvcs dicvpaslel sgvidttttr adpaiaasla qrpfsakear vkdvtctigm
      181 agadltldaa itlppaggqe lvvietgnpd lwvseadttr kgnvlharvd vghvsggpva
      241 lnrshirmtv lgskqavdiv gcnag
//
LOCUS       WP_235184350             353 aa            linear   BCT 02-MAR-2025
DEFINITION  agmatine deiminase family protein [Agrilactobacillus composti].
ACCESSION   WP_235184350
VERSION     WP_235184350.1
KEYWORDS    RefSeq.
SOURCE      Agrilactobacillus composti
  ORGANISM  Agrilactobacillus composti
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Agrilactobacillus.
REFERENCE   1  (residues 1 to 353)
  AUTHORS   Shirai,H., Blundell,T.L. and Mizuguchi,K.
  TITLE     A novel superfamily of enzymes that catalyze the modification of
            guanidino groups
  JOURNAL   Trends Biochem Sci 26 (8), 465-468 (2001)
   PUBMED   11504612
REFERENCE   2  (residues 1 to 353)
  AUTHORS   McGraw,W.T., Potempa,J., Farley,D. and Travis,J.
  TITLE     Purification, characterization, and sequence analysis of a
            potential virulence factor from Porphyromonas gingivalis,
            peptidylarginine deiminase
  JOURNAL   Infect Immun 67 (7), 3248-3256 (1999)
   PUBMED   10377098
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016274.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04371.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Agrilactobacillus composti"
                     /db_xref="taxon:398555"
     Protein         1..353
                     /product="agmatine deiminase family protein"
                     /GO_function="GO:0004668 - protein-arginine deiminase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009446 - putrescine biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=39207
     Region          <109..342
                     /region_name="PAD_porph"
                     /note="Porphyromonas-type peptidyl-arginine deiminase;
                     pfam04371"
                     /db_xref="CDD:461280"
ORIGIN      
        1 mklirkshgi lrptkqleen imskktgfla aiicagcllv ggskttvara atesaptiyt
       61 alpslnntyy rpfnkslqsf gnqlaqndpa nvvtitkqsl thktsgftyd diwlrdvapv
      121 ittkmvkfry dpsylkkadr qyldqrfrtw lnqenfnydt sdlvldggnl iwnnsdtvil
      181 tshvfkdnpd wskadivael kgklavdhvi iipsepgdvl ghadgmvkfi sarklyvsdf
      241 sgdtklvkkv qqkikaelpn akfvvlpsay tekgqydpki asakglyinm letpdtiyvp
      301 hyglkadtkv lkivkqhttk kvvpidvaki sttggsvhcl twdvpqafmp shn
//
LOCUS       WP_235184386             292 aa            linear   BCT 02-MAR-2025
DEFINITION  alcohol dehydrogenase catalytic domain-containing protein
            [Agrilactobacillus composti].
ACCESSION   WP_235184386
VERSION     WP_235184386.1
KEYWORDS    RefSeq.
SOURCE      Agrilactobacillus composti
  ORGANISM  Agrilactobacillus composti
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Agrilactobacillus.
REFERENCE   1  (residues 1 to 292)
  AUTHORS   Taneja,B. and Mande,S.C.
  TITLE     Conserved structural features and sequence patterns in the GroES
            fold family
  JOURNAL   Protein Eng 12 (10), 815-818 (1999)
   PUBMED   10556240
REFERENCE   2  (residues 1 to 292)
  AUTHORS   Murzin,A.G.
  TITLE     Structural classification of proteins: new superfamilies
  JOURNAL   Curr Opin Struct Biol 6 (3), 386-394 (1996)
   PUBMED   8804825
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08240.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Agrilactobacillus composti"
                     /db_xref="taxon:398555"
     Protein         1..292
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /calculated_mol_wt=30246
     Region          1..>240
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
     Site            order(40..42,45,121,125,147..152,171..172,174,188,
                     208..209,231..232)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176191"
ORIGIN      
        1 mlafgyrhsg gpdvfealdi ptpkpganel lldtvavgln nrerteraqg sfagttyqis
       61 grdavgrvae vganlkndfk vgqlvathse htyaaavlae pansalvpag vdpvvaagli
      121 ttgitaykav hyfakvktgq tvivkgasgg vgalvaqllh qlgvtvigva aaknealvtd
      181 lgidnfvayd qvnladalke kgdivfnlam ngnggaddva mtktggaivs vahetpeltr
      241 gisfthirpt salsdqealk allpllaqdk lsvnigytch fpwraslkam sy
//
LOCUS       WP_235184405             500 aa            linear   BCT 02-MAR-2025
DEFINITION  lyase family protein [Bacillus manliponensis].
ACCESSION   WP_235184405
VERSION     WP_235184405.1
KEYWORDS    RefSeq.
SOURCE      Bacillus manliponensis
  ORGANISM  Bacillus manliponensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00206.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Bacillus manliponensis"
                     /db_xref="taxon:574376"
     Protein         1..500
                     /product="lyase family protein"
                     /calculated_mol_wt=57280
     Region          1..458
                     /region_name="ArgH"
                     /note="Argininosuccinate lyase [Amino acid transport and
                     metabolism]; COG0165"
                     /db_xref="CDD:439935"
ORIGIN      
        1 mmqeqvtgri qkppheayvq gvllpqfqye lenyvnhyln iekvllkayk kmnllsetda
       61 hrvwesikkv nedsilnisk ynmtdialsi ervieqhlde pvvnwhidrs rndfqacaql
      121 mytrekwiql iekvdafaql mlekakkhiy mimpgythyq saqiisvgfy ltavsrhvld
      181 tmkkmigvle nmnnqcplgs gamsgqeynw dcdqmandlg fqsyvghals gvasrdwale
      241 vaeclsffas nmsrfltdfi qwgsseyqfi dlpdeltgis ssmpqkrnfp ilerlrgkts
      301 hlisyhidfl lgqrntsysn lvevskeagr nlstlfneae slldllllvf enisfkeenm
      361 kqccaleyyg gftlanlltq knnipyrkaq vvagkfvtks lenhiapqya sielldevcl
      421 dngcvntvtq kelenifgve ralefkktkg stnpeavadi liyqsekeef lrkkfnsite
      481 sirnkisvle ngdsiyeenv
//
LOCUS       WP_235184442             410 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Bacillus manliponensis].
ACCESSION   WP_235184442
VERSION     WP_235184442.1
KEYWORDS    RefSeq.
SOURCE      Bacillus manliponensis
  ORGANISM  Bacillus manliponensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Bacillus manliponensis"
                     /db_xref="taxon:574376"
     Protein         1..410
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45041
     Region          1..392
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(3..4,7..8,11,43,93..94,96..98,101,121,124..125,128,
                     212,215..216,219..221,224,252,256,314..315,319,323,339,
                     342..343,346..347,350)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 minqvdkiii glvsvplmke fhlspsqwgl vgssffwcft fssiilggma dsrntkkmlt
       61 wmsliwlavq fvtpfvssls llvltrmilg agegpapals taimgkwfpk hrhgigfgav
      121 llgttggsai aspllislid qygwrsafia mgivglivlv lwvifgkesp qeiglpsfhq
      181 eeqhastlsk vswrqfllyl lsknfvfivl cggcaywlls vqaiwfpayf tkvqqfdgqt
      241 lklavslpfl faaisqigfs mlsdwlyrkt gdirksrinl agsmmvlsal cvyvanivns
      301 saisilfftl apgfayvils lapailmdff spqnigkaqg tfialassts iiaplvfgyf
      361 iqyaateamg yrygfqvtal gmfvigllfw vivrpekqnh itikeeqvni
//
LOCUS       WP_235184443             411 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Bacillus manliponensis].
ACCESSION   WP_235184443
VERSION     WP_235184443.1
KEYWORDS    RefSeq.
SOURCE      Bacillus manliponensis
  ORGANISM  Bacillus manliponensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Bacillus manliponensis"
                     /db_xref="taxon:574376"
     Protein         1..411
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45045
     Region          1..392
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(3..4,7..8,11,43,93..94,96..98,101,121,124..125,128,
                     212,215..216,219..221,224,252,256,314..315,319,323,339,
                     342..343,346..347,350)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 minqvdkiii glvsvplmke fhlspsqwgl vgssffwcft fssiilggma dsrntkkmlt
       61 wmsliwlavq fvtpfvssls llvltrmilg agegpapals taivgkwlpk hrhgigfgav
      121 lcgatigpai aspllislid qygwrsafia mgivglivlv lwvifgkesp qeiglpsfhq
      181 eeqhastlsk vswrqflpyl lsknfvftvl cggcaywlls vqaiwfpayf tkiqhfdgqt
      241 lklavslpfl faaisqigfs mlsdwlyrkt gdirksrinl agsmmvlsal cvyvanivns
      301 saisilffil apgfayvils lapaifmdff spknigkaqg ayvalassts iiaplifgyf
      361 iqyaateemg yrygfqvtal gmfvigllfw ivvrpakqsh itikaeeqvs i
//
LOCUS       WP_235184574             540 aa            linear   BCT 02-MAR-2025
DEFINITION  alginate export family protein [Pseudomonas chlororaphis].
ACCESSION   WP_235184574
VERSION     WP_235184574.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas chlororaphis
  ORGANISM  Pseudomonas chlororaphis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 540)
  AUTHORS   Whitney,J.C., Hay,I.D., Li,C., Eckford,P.D., Robinson,H.,
            Amaya,M.F., Wood,L.F., Ohman,D.E., Bear,C.E., Rehm,B.H. and
            Howell,P.L.
  TITLE     Structural basis for alginate secretion across the bacterial outer
            membrane
  JOURNAL   Proc Natl Acad Sci U S A 108 (32), 13083-13088 (2011)
   PUBMED   21778407
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024765.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13372.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Pseudomonas chlororaphis"
                     /db_xref="taxon:587753"
     Protein         1..540
                     /product="alginate export family protein"
                     /calculated_mol_wt=59431
     Region          76..535
                     /region_name="Alginate_exp"
                     /note="Alginate export; cl16257"
                     /db_xref="CDD:472886"
ORIGIN      
        1 mkftpsshan pvaaaagcdr arsarqpgdr dpllrsrsqp aaaatgklfs lsklgvalgf
       61 alvwsnptla aitesknfgl evkitgqsed drdlgtlggg dvngvgldlr pwvygesgnw
      121 sayamgqavt stdiietdtl qqsdgastes snnsdrkskk nylamrefwi gysgltpypg
      181 eqlkfgrqrl rnddgqwrdt niealnwtfd ttllranvgi aerfseyrtd lkelapedkd
      241 rlhvygdvay qwtpghwagv rahhshddgk ldypvpgeat dsldkrqngd ltwlgleans
      301 daynwrntnt vnywasitgm sgdrdkvnal ntdgtrpaqa ksgenldgwa tdlgvrlrld
      361 pkwqvgaaya rasgdyeqng lesnrsnytg trsrvhrfge afrgemnnmq tatlfgswml
      421 adeydasliy hkfwrvdgnk pvgsnginav ennyddatga llsssslplr dgekdlgqev
      481 dlvvtkyfkq gllpaalsqs idepsalvrf rggvfkpgda ygknvdsymh rafvdviwrf
//
LOCUS       WP_235184582             863 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Pseudomonas chlororaphis].
ACCESSION   WP_235184582
VERSION     WP_235184582.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas chlororaphis
  ORGANISM  Pseudomonas chlororaphis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 863)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..863
                     /organism="Pseudomonas chlororaphis"
                     /db_xref="taxon:587753"
     Protein         1..863
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=94708
     Region          23..857
                     /region_name="EAL"
                     /note="EAL domain. This domain is found in diverse
                     bacterial signaling proteins. It is called EAL after its
                     conserved residues and is also known as domain of unknown
                     function 2 (DUF2). The EAL domain has been shown to
                     stimulate degradation of a second...; cl29561"
                     /db_xref="CDD:453023"
ORIGIN      
        1 mirdddrdgm havaamdmsv gsttgeeaad ffaqtleqan davviiddrn qvvffnaaae
       61 rfwgcqrhev lgsevgtlvp ipirsrndge tginkiigts rdvcitrkdg eerwgamais
      121 kitlqgrily aaffkdvtqt rlkdieqcll smsvnvsssa tcivdadgrl iyindglvrl
      181 lgysreelle rspqmffvad tpgaaqadel hlesilsgqp heacgliskr ngqrlwvqvc
      241 sapvfdakgr ignivivftd itrsrlpevl qdkvigallq eqalenvltl lcqeierlap
      301 evvvsilrvd eqgllhhlas pglpadyara meglpigpaa gscgtaafrg epvlvtdidt
      361 dplwadyrwl aqqagvracw smpvrnsggr vcatfalyfr esrkpdttha hlimtgtylc
      421 mlalereear qsiqrmalsd altglpnrss llaeanrsla evaleqgela vlyvdldrfk
      481 qvndalghas gdellkvmaq rlrsvlresd ivgrlsgdef vlvlprmnaa rvtafierlm
      541 ltlgapadiv gtamvpsasv gvslypsdgq dmesllhcad iamyqakrte rggfrfflee
      601 mdqlaqqrlq letalrqalt sdglhlvyqp qidlrtnglv gvealarweh pslgtiapaq
      661 fialaeecgl inylsqwvlc eaceqlarwr rsgirvpsis vnlspinfhn fnlaaliarq
      721 lqrcglqpad lcvevtegvf lcsnptteqt lqdlhtlgvr laiddfgagy sslgylrrlp
      781 iselkldqsf veelehdatc ralseavigi gkglslrvva egiehaaqrd ilqargydvg
      841 qgqlfsspmp arvlgqwfvg wqr
//
LOCUS       WP_235184595             153 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6392 family protein [Pseudomonas chlororaphis].
ACCESSION   WP_235184595
VERSION     WP_235184595.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas chlororaphis
  ORGANISM  Pseudomonas chlororaphis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040077.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19929.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Pseudomonas chlororaphis"
                     /db_xref="taxon:587753"
     Protein         1..153
                     /product="DUF6392 family protein"
                     /calculated_mol_wt=17284
     Region          2..145
                     /region_name="DUF6392"
                     /note="Family of unknown function (DUF6392); pfam19929"
                     /db_xref="CDD:437761"
ORIGIN      
        1 middlvkslg rtypqmiasg mylpgeppkg mfedvdtmvm wpeagielef wastqrfeal
       61 yislqksfpe esiykgslpy qlmprmsqaw vrsrfgsple sgapyripvl gmtggwdvyr
      121 lpgvpkstqv afkynvemdv emvvfelnek sha
//
LOCUS       WP_235184633             296 aa            linear   BCT 02-MAR-2025
DEFINITION  MazG nucleotide pyrophosphohydrolase domain-containing protein
            [Exiguobacterium undae].
ACCESSION   WP_235184633
VERSION     WP_235184633.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium undae
  ORGANISM  Exiguobacterium undae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis; Exiguobacterium.
REFERENCE   1  (residues 1 to 296)
  AUTHORS   Zhang,J. and Inouye,M.
  TITLE     MazG, a nucleoside triphosphate pyrophosphohydrolase, interacts
            with Era, an essential GTPase in Escherichia coli
  JOURNAL   J Bacteriol 184 (19), 5323-5329 (2002)
   PUBMED   12218018
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015758.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03819.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Exiguobacterium undae"
                     /db_xref="taxon:169177"
     Protein         1..296
                     /product="MazG nucleotide pyrophosphohydrolase
                     domain-containing protein"
                     /calculated_mol_wt=33285
     Region          7..85
                     /region_name="NTP-PPase"
                     /note="Nucleoside Triphosphate Pyrophosphohydrolase (EC
                     3.6.1.8) MazG-like domain superfamily; cl16941"
                     /db_xref="CDD:473051"
ORIGIN      
        1 mqemirlqqk vdetiralgg yfrplsglar lieevgevge aletadhqal kaeivdvlmi
       61 stclsnqyvt dlagqhrelg teydqeqgsf yrlvheagqv arvmngyegd kppkktedii
      121 pigtslarlq relfrlarpl eldllteidq tnaknrqrdr arfaltrdpv teltidhfrs
      181 atgnterlwg apaheadlpl eahieaalps lrrfvrcari egiagfviea piersdslis
      241 vkeqadeigr likeqtplaf keapyridvy apqlgpvspy haeddhrmfl vlhvde
//
LOCUS       WP_235184639             295 aa            linear   BCT 02-MAR-2025
DEFINITION  outer membrane protein OmpK [Photorhabdus temperata].
ACCESSION   WP_235184639
VERSION     WP_235184639.1
KEYWORDS    RefSeq.
SOURCE      Photorhabdus temperata
  ORGANISM  Photorhabdus temperata
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Photorhabdus.
REFERENCE   1  (residues 1 to 295)
  AUTHORS   Inoue,T., Matsuzaki,S. and Tanaka,S.
  TITLE     Cloning and sequence analysis of Vibrio parahaemolyticus ompK gene
            encoding a 26-kDa outer membrane protein, OmpK, that serves as
            receptor for a broad-host-range vibriophage, KVP40
  JOURNAL   FEMS Microbiol Lett 134 (2-3), 245-249 (1995)
   PUBMED   8586275
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015466.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03502.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Photorhabdus temperata"
                     /db_xref="taxon:574560"
     Protein         1..295
                     /product="outer membrane protein OmpK"
                     /GO_component="GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /calculated_mol_wt=34213
     Region          94..294
                     /region_name="Channel_Tsx"
                     /note="Nucleoside-specific channel-forming protein, Tsx;
                     cl04114"
                     /db_xref="CDD:446279"
ORIGIN      
        1 mllagkahhp kscppffftl glsspfscaa ylamawywis trlkqrelss illllpvinq
       61 aqasdfvnfq svdtslyiqf enrvdprkti spileafgdy sigdmyvysi wqnslqsdyt
      121 gdkstyyykf vprvsfskvt ghdisfgplk dilfaqwvak tkgmdydyfp gisidwqadw
      181 iswlrtifyf enndkgswnd qrihvdygip fnnrlgdfrv vgtfdytlgl hgqpetidfk
      241 pelhydlgkf lgnqpghlwt givlnpiknk ykikdtpyyr tdqfsygifi rysff
//
LOCUS       WP_235184628             504 aa            linear   BCT 02-MAR-2025
DEFINITION  SdrD B-like domain-containing protein [Exiguobacterium undae].
ACCESSION   WP_235184628
VERSION     WP_235184628.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium undae
  ORGANISM  Exiguobacterium undae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis; Exiguobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028519.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17210.9
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Exiguobacterium undae"
                     /db_xref="taxon:169177"
     Protein         1..504
                     /product="SdrD B-like domain-containing protein"
                     /calculated_mol_wt=55315
     Region          164..273
                     /region_name="SdrD_B"
                     /note="SdrD B-like domain; pfam17210"
                     /db_xref="CDD:435789"
ORIGIN      
        1 mnrmkklgmy ilacllvfgv itpaqaetal twdvkgtgtn pytltftgeg vvnlesettl
       61 vfeegvtgqe idiaktpivt ftaetapvvk ivsadqtktv liefgrevke eptpeepvte
      121 eppaeepike dppaeepvee epvkeepvke epkpeteqpv attgtisgti wydenedgir
      181 qeketrisdv pvyllnadyd vvdeaytkdg lysfkdlkpg tyyidvygmd igyystspqh
      241 egtdptidsd ldeddmakvk ltagenvqid aglygydeea emdfsnlllv tnffdanadk
      301 ipgyseqtlp atytvtdait gndvytekvg kddalmielt pgtytvktev asgytveamh
      361 hislddlmds fefemtkasv kalavgmade eeeefpeyde flklferkat tdsitltedt
      421 mgyflvaeiv kakpvvapkp tptptktpvk tveapatnla dqqttnttsn erlpqagedk
      481 pfpyaatgag faviglwlll rrag
//
LOCUS       WP_235184647             117 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Photorhabdus
            temperata].
ACCESSION   WP_235184647
VERSION     WP_235184647.1
KEYWORDS    RefSeq.
SOURCE      Photorhabdus temperata
  ORGANISM  Photorhabdus temperata
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Photorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024949.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13560.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Photorhabdus temperata"
                     /db_xref="taxon:574560"
     Protein         1..117
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=13276
ORIGIN      
        1 mlytesella elghrlrehr lrrnmlqtel ahrsgisvsa lkklegsgqg tlenfmkvvf
       61 alrlenevks lfvpqqisia qleamkkpvr qrarrtlrpa rklsynvrah qsggskk
//
LOCUS       WP_235184742             185 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Photorhabdus temperata].
ACCESSION   WP_235184742
VERSION     WP_235184742.1
KEYWORDS    RefSeq.
SOURCE      Photorhabdus temperata
  ORGANISM  Photorhabdus temperata
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Photorhabdus.
REFERENCE   1  (residues 1 to 185)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 185)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Photorhabdus temperata"
                     /db_xref="taxon:574560"
     Protein         1..185
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=20415
     Region          2..169
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(13..14,100,102,131,166)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:271175"
     Site            order(13,131,134,157,166)
                     /site_type="active"
                     /db_xref="CDD:271175"
ORIGIN      
        1 maflfiaynt llrisniarl qvkdlifnrd gsvmlnigyt ktivdgqgit kalsprasas
       61 llrwlnvagl idhhdayifc kvhrvnkaii ttakpltrpn lerifsaawa vvqgdkkgve
      121 nkgryttwtg hsarvgaaqd mtesgyslaq imhegtwtka etvlgyirhi eakksvmidl
      181 vegks
//
LOCUS       WP_235184855             657 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Cupriavidus sp. SK-3].
ACCESSION   WP_235184855
VERSION     WP_235184855.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-3
  ORGANISM  Cupriavidus sp. SK-3
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
REFERENCE   1  (residues 1 to 657)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Cupriavidus sp. SK-3"
                     /db_xref="taxon:1470558"
     Protein         1..657
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=69281
     Region          <332..655
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(441..442,445..446,449,452..453,455..456,459,
                     462..463,466,469..470,473..474,477,480..481,483..484,488,
                     490..491,494,497..498,501..502,505,508,511..512,515,519,
                     522,529,533,536,539..540,543,546..547,550..551,553..554,
                     557..558,571..572,575,578..579,582,585..586,588..589,
                     592..593,596,599..600,603,606..607,609..610,613..614,
                     616..617,620,623..624)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            511..544
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 mqvlflgsfv vtflspamrl marltitrkl lllailflip lsgslyavls lsvqsirssq
       61 delrglaivd raldfmretq vrrgaanavl agnaafratf dgadakaath ldglmqqaga
      121 aagfdvmpda kklgeswrrm hetglnttag plfdmhsalv kqtrlfigdv adrsslaldp
      181 dsgsyylvtl mvgpmprlae lsalargrga aiisqggysd aaqqaelaal geqiqdgles
      241 vrrdigrvtr gapayrarve saqaqlsavd afyrtlkerm lgssginiea kayfdeataa
      301 inavssvnke fsalaramle qriaadklel evlggvalla vgaafylfag fscgmredvr
      361 qvadmvgrin agdlgirlev hgsdelshvk rhllslvdtw rvligdtkeg aqnvlvaage
      421 iaqgnldlsq rteeqasslq qtaasmeqlt aivqqnagsa dqasalasea sgiavaggas
      481 vgrvlqtmge ieadskrivd iiavidgiaf qtnilalnaa veaarageyg rgfavvaaev
      541 rnlaqragss akeirtlisq svqrveagsa lagdatatme sivgavgrvt ammdeisras
      601 reqssgiaqv nqavtqmdqv tqqnaalveq aaaaadalre qaqrmersva vfrlevv
//
LOCUS       WP_235184865              88 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase, partial [Cupriavidus sp. SK-3].
ACCESSION   WP_235184865
VERSION     WP_235184865.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-3
  ORGANISM  Cupriavidus sp. SK-3
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024698.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13302.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Cupriavidus sp. SK-3"
                     /db_xref="taxon:1470558"
     Protein         <1..88
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
     Region          <2..82
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
ORIGIN      
        1 gappsqgrgy agtatrlamd yafmvlnlhk lflivdvqna kaihiyekcg fqregellee
       61 ffsygayhna lrmcafqrdy laardarr
//
LOCUS       WP_235184886             177 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Cupriavidus sp. SK-3].
ACCESSION   WP_235184886
VERSION     WP_235184886.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-3
  ORGANISM  Cupriavidus sp. SK-3
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
REFERENCE   1  (residues 1 to 177)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Cupriavidus sp. SK-3"
                     /db_xref="taxon:1470558"
     Protein         1..>177
                     /product="AMP-binding protein"
     Region          30..>124
                     /region_name="MenE/FadK"
                     /note="O-succinylbenzoic acid-CoA ligase MenE or related
                     acyl-CoA synthetase (AMP-forming) [Lipid transport and
                     metabolism]; COG0318"
                     /db_xref="CDD:440087"
ORIGIN      
        1 msstpmpgah apaaapstsf trlhqtigpw vqshperval mdaerslryg eldsaiaeta
       61 ralaaqgvrg gdrvvlvten svgcavlila lsaldawavp vnarlsarei dnivehcgar
      121 ialyldsahp earehglarg aqpaewphvg rlllgatdqa avaepveaaa rgpgaap
//
LOCUS       WP_235184894             113 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein, partial [Cupriavidus
            sp. SK-3].
ACCESSION   WP_235184894
VERSION     WP_235184894.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-3
  ORGANISM  Cupriavidus sp. SK-3
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024776.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13384.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Cupriavidus sp. SK-3"
                     /db_xref="taxon:1470558"
     Protein         1..>113
                     /product="helix-turn-helix domain-containing protein"
     Region          25..>110
                     /region_name="transpos_IS630"
                     /note="IS630 family transposase; NF033545"
                     /db_xref="CDD:468076"
ORIGIN      
        1 mltdeertkl trlvrsklts vrlaqrariv llaangmqnk diaeqlgigr vqvarwrery
       61 aqsgltgier dlprgapplk vdtarlvelt tqgkpvatth wstrkmaael gvs
//
LOCUS       WP_235184901             319 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1254 domain-containing protein [Cupriavidus sp. SK-3].
ACCESSION   WP_235184901
VERSION     WP_235184901.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-3
  ORGANISM  Cupriavidus sp. SK-3
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018561.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06863.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Cupriavidus sp. SK-3"
                     /db_xref="taxon:1470558"
     Protein         1..319
                     /product="DUF1254 domain-containing protein"
                     /calculated_mol_wt=34893
     Region          30..319
                     /region_name="COG5361"
                     /note="Uncharacterized conserved protein [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:444136"
ORIGIN      
        1 mappplavtp dnfvraetdl nfagivrkeg fgrfehdrei tpinrqnvir lnrdtlysaa
       61 ifdldagpvt itlpdpgkrf lsmqvldedq ytpfvaygag rhvltrqsig tryvlagvri
      121 lvdpndpadv qrvhalqdai gvdhkargtf evpnwdpasq kivrdallvl astlpdtnra
      181 fgpkgqvdpv rrligaasaw ggnpqkdaiy lnvvparndg stvhrlvvgk vpvdgfwsvs
      241 vynakgyyea nplnaytins vtgkkgedgs vtvqfggceg qvanclpvmq gwnymvrlyr
      301 praeaqsgkw qfpkaqpvq
//
LOCUS       WP_235184910              80 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF1266 domain-containing protein [Cupriavidus].
ACCESSION   WP_235184910
VERSION     WP_235184910.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus
  ORGANISM  Cupriavidus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018584.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06889.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Cupriavidus"
                     /db_xref="taxon:106589"
     Protein         1..80
                     /product="DUF1266 domain-containing protein"
                     /calculated_mol_wt=8852
     Region          <3..69
                     /region_name="DUF1266"
                     /note="Protein of unknown function (DUF1266); cl14673"
                     /db_xref="CDD:472703"
ORIGIN      
        1 maawrvllln aqraqdcfas weefglafia grrqwvaafr adpmgktfde aslhrllapp
       61 kgvwatlawp dlpafspepl
//
LOCUS       WP_235184916             136 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Cupriavidus sp.
            SK-3].
ACCESSION   WP_235184916
VERSION     WP_235184916.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-3
  ORGANISM  Cupriavidus sp. SK-3
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
REFERENCE   1  (residues 1 to 136)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Cupriavidus sp. SK-3"
                     /db_xref="taxon:1470558"
     Protein         1..136
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=14907
     Region          <32..114
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mpigqatlph plelapglsi stgawdvpic pagkrrftlp darfrvnvpd amavalqegm
       61 gigalptltv raafragtlv hvlpeyhlqr ldiyvlyasr qyldtkiktr iafirewipd
      121 alradeilvq gvdrpv
//
LOCUS       WP_235184929             348 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleoside recognition domain-containing protein, partial
            [Cupriavidus sp. SK-3].
ACCESSION   WP_235184929
VERSION     WP_235184929.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-3
  ORGANISM  Cupriavidus sp. SK-3
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
REFERENCE   1  (residues 1 to 348)
  AUTHORS   Hantke,K.
  TITLE     Is the bacterial ferrous iron transporter FeoB a living fossil?
  JOURNAL   Trends Microbiol 11 (5), 192-195 (2003)
   PUBMED   12781516
REFERENCE   2  (residues 1 to 348)
  AUTHORS   Loewen,S.K., Ng,A.M., Yao,S.Y., Cass,C.E., Baldwin,S.A. and
            Young,J.D.
  TITLE     Identification of amino acid residues responsible for the
            pyrimidine and purine nucleoside specificities of human
            concentrative Na(+) nucleoside cotransporters hCNT1 and hCNT2
  JOURNAL   J Biol Chem 274 (35), 24475-24484 (1999)
   PUBMED   10455109
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019292.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07670.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Cupriavidus sp. SK-3"
                     /db_xref="taxon:1470558"
     Protein         1..>348
                     /product="nucleoside recognition domain-containing
                     protein"
     Region          2..208
                     /region_name="SpmA"
                     /note="Spore maturation protein SpmA (function unknown)
                     [General function prediction only]; COG2715"
                     /db_xref="CDD:442028"
     Region          241..>348
                     /region_name="SpmB"
                     /note="Spore maturation protein SpmB (function unknown)
                     [Function unknown]; COG0700"
                     /db_xref="CDD:440464"
ORIGIN      
        1 malnlvwlsf fllafvvaci rlaagdtavf pamlaslfdn artafeislg lagvmslwlg
       61 mmrigeragv vdvfaravnp llrhffpgip qghpaqgamm mnvsanmlgl dnaatplgln
      121 amrelqslnp rpdtasnaqi mfivlntagl tliptsviam rqaiavkqgl tgfnaadifl
      181 ptllatcvsc vagllavawa qrlnllkpvv laafgllavg vcglflwlrh appeqvstat
      241 alagsgfilt livvflvcga irginvydaf idgakegfgv avqiipylia ilvaiglfrv
      301 tgcmdvlmkg ltasfawlgl dtafvpalpv glmkilsgag argpmidv
//
LOCUS       WP_235185065             199 aa            linear   BCT 02-MAR-2025
DEFINITION  group II intron maturase-specific domain-containing protein
            [Cupriavidus sp. SK-3].
ACCESSION   WP_235185065
VERSION     WP_235185065.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-3
  ORGANISM  Cupriavidus sp. SK-3
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
REFERENCE   1  (residues 1 to 199)
  AUTHORS   Centron,D. and Roy,P.H.
  TITLE     Presence of a group II intron in a multiresistant Serratia
            marcescens strain that harbors three integrons and a novel gene
            fusion
  JOURNAL   Antimicrob Agents Chemother 46 (5), 1402-1409 (2002)
   PUBMED   11959575
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019984.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08388.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Cupriavidus sp. SK-3"
                     /db_xref="taxon:1470558"
     Protein         1..199
                     /product="group II intron maturase-specific
                     domain-containing protein"
                     /calculated_mol_wt=23355
     Region          <2..162
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 mqsvrfcrya ddgvvhcksl aqaklaldri gkrfgecgle lhpgktrivy crdvnrreph
       61 pdvqftflay tfrprkavdk yqriyvnfap avsrdalkam rqtirgwhlq lmcdrelgdl
      121 aarfnpilrg wqqyygrfhg samsviwkhm ndylvrwmmr kykplarrkt rarhalgrla
      181 rrfptafvhw rmgclpavg
//
LOCUS       WP_235184648             158 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar biosynthetic protein FliO [Exiguobacterium undae].
ACCESSION   WP_235184648
VERSION     WP_235184648.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium undae
  ORGANISM  Exiguobacterium undae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis; Exiguobacterium.
REFERENCE   1  (residues 1 to 158)
  AUTHORS   Fabiani,F.D., Renault,T.T., Peters,B., Dietsche,T., Galvez,E.J.C.,
            Guse,A., Freier,K., Charpentier,E., Strowig,T., Franz-Wachtel,M.,
            Macek,B., Wagner,S., Hensel,M. and Erhardt,M.
  TITLE     A flagellum-specific chaperone facilitates assembly of the core
            type III export apparatus of the bacterial flagellum
  JOURNAL   PLoS Biol 15 (8), e2002267 (2017)
   PUBMED   28771474
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 158)
  AUTHORS   Minamino,T. and Macnab,R.M.
  TITLE     Components of the Salmonella flagellar export apparatus and
            classification of export substrates
  JOURNAL   J Bacteriol 181 (5), 1388-1394 (1999)
   PUBMED   10049367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016250.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04347.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Exiguobacterium undae"
                     /db_xref="taxon:169177"
     Protein         1..158
                     /product="flagellar biosynthetic protein FliO"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0044781 - bacterial-type flagellum
                     organization [Evidence IEA]"
                     /calculated_mol_wt=17077
     Region          <62..157
                     /region_name="FliO"
                     /note="Flagellar biosynthesis protein, FliO; cl01247"
                     /db_xref="CDD:445331"
ORIGIN      
        1 mtcllllllt nrvgaetvee nlnpsknnep ttqqvdgsst vvtvvkvvva lvvliggfll
       61 avrfinertk gvrhssrlsh lggvplgkdr svqlvkvhgk iyvvgvgqnv elldtiedde
      121 ewtssadlpd spdpssaspf lesfkqqleq fqknrgqs
//
LOCUS       WP_235185096             344 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: VOC family protein [Cupriavidus].
ACCESSION   WP_235185096
VERSION     WP_235185096.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus
  ORGANISM  Cupriavidus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
REFERENCE   1  (residues 1 to 344)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 344)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Cupriavidus"
                     /db_xref="taxon:106589"
     Protein         1..344
                     /product="VOC family protein"
                     /calculated_mol_wt=38195
     Region          3..111
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
     Region          149..300
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 melaflrwek rdlaaterfw rdfgmhpvsv sadritargi gtapciavae rsavsrfvgp
       61 afrmsddtdl nryidrfgat wlskqqipgg grgvelfdps grsvwlvqgq qhvealpmrp
      121 pmtltntaqh aprvnrtvrt piepasivrl ghvvfqtvdf atmaawymtv lgviptdvqy
      181 ladgspnlaf crldlgqapa dhhtlvlvgg ieekyehsay evidldalgq gqqvlraqgh
      241 shmwgigrhl lgsqlfdywr dpdgfelehy tdgdlftadf etayspldfg giwawgadap
      301 asmkprktlr nvlkvlrlvq rkaiaparlk lietalgapa rpwl
//
LOCUS       WP_235185107             265 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein, partial [Cupriavidus sp. SK-3].
ACCESSION   WP_235185107
VERSION     WP_235185107.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-3
  ORGANISM  Cupriavidus sp. SK-3
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
REFERENCE   1  (residues 1 to 265)
  AUTHORS   Gao,G., Nara,T., Nakajima-Shimada,J. and Aoki,T.
  TITLE     Novel organization and sequences of five genes encoding all six
            enzymes for de novo pyrimidine biosynthesis in Trypanosoma cruzi
  JOURNAL   J Mol Biol 285 (1), 149-161 (1999)
   PUBMED   9878395
REFERENCE   2  (residues 1 to 265)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
REFERENCE   3  (residues 1 to 265)
  AUTHORS   Nygaard,P., Duckert,P. and Saxild,H.H.
  TITLE     Role of adenine deaminase in purine salvage and nitrogen metabolism
            and characterization of the ade gene in Bacillus subtilis
  JOURNAL   J Bacteriol 178 (3), 846-853 (1996)
   PUBMED   8550522
REFERENCE   4  (residues 1 to 265)
  AUTHORS   Lollier,M., Jaquet,L., Nedeva,T., Lacroute,F., Potier,S. and
            Souciet,J.L.
  TITLE     As in Saccharomyces cerevisiae, aspartate transcarbamoylase is
            assembled on a multifunctional protein including a
            dihydroorotase-like cryptic domain in Schizosaccharomyces pombe
  JOURNAL   Curr Genet 28 (2), 138-149 (1995)
   PUBMED   8590465
REFERENCE   5  (residues 1 to 265)
  AUTHORS   Jabri,E., Carr,M.B., Hausinger,R.P. and Karplus,P.A.
  TITLE     The crystal structure of urease from Klebsiella aerogenes
  JOURNAL   Science 268 (5213), 998-1004 (1995)
   PUBMED   7754395
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01979.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Cupriavidus sp. SK-3"
                     /db_xref="taxon:1470558"
     Protein         <1..265
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
     Region          <1..263
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
ORIGIN      
        1 rapgggrlgl aphslravpp qsladavagl haldaqapvh ihiaeqqrev decitltgtr
       61 pvawlldhae vdarwclvha thldwderrr lahsgavagi cptteanlgd gvfdaapylg
      121 qggvwgigsd shasvsvaee lrlfeygqrl alqkrnvlas dahkqvadrl yldaaaggar
      181 asgrpigala pgqqadfvvl dgahpalagl sgsqalavhv ftnhghetla evrtagrtrv
      241 qhgahalqaq agkgfaaara slltd
//
LOCUS       WP_235185120             503 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Cupriavidus sp.
            SK-3].
ACCESSION   WP_235185120
VERSION     WP_235185120.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-3
  ORGANISM  Cupriavidus sp. SK-3
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
REFERENCE   1  (residues 1 to 503)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Cupriavidus sp. SK-3"
                     /db_xref="taxon:1470558"
     Protein         1..>503
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          1..489
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(306..307,310..311,314,317..318,320..321,324,
                     327..328,331,334..335,338..339,342,345..346,348..349,353,
                     355..356,359,362..363,366..367,370,373,376..377,380,384,
                     387,394,398,401,404..405,408,411..412,415..416,418..419,
                     422..423,436..437,440,443..444,447,450..451,453..454,
                     457..458,461,464..465,468,471..472,474..475,478..479,
                     481..482,485,488..489)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            376..409
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 mfrnttigtr lwiltvvsnm lllvvgavgw lgmsrsndat rqiyqqqlaa avnlaearsn
       61 qllvrvlldq atfaadpada raraataegf arqsdaawka ylalprspee tkaaeevaar
      121 realftqgvs pmiaalhqgd reavmravld tipkldiaft avntelgrlq vasaeavyhg
      181 sqeryttlrs lsigvlalgl cfstvvawrl rrsivgplda aiarferiaa gdlgaksgga
      241 glsaegerse tgrmlamlgr mqaslaamvs dvrggadsia aaskqiasgn sdlsqrteqq
      301 aasleetass meqltgtvrq nadsareand lasdatglae rgsdavarva stmqaidasa
      361 nkivdiidvi ekiafqtnil alnaaveaar agehgrgfav vagdvrdlsq rcagaskeir
      421 tligdsvsrv raggemvdqa gqvmqemvna vrrvsgimgg issasdeqsr gieqvnqava
      481 qmdgmtqqna alveqaaaaa asl
//
LOCUS       WP_235185130             683 aa            linear   BCT 02-MAR-2025
DEFINITION  RICIN domain-containing protein [Cupriavidus sp. SK-3].
ACCESSION   WP_235185130
VERSION     WP_235185130.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-3
  ORGANISM  Cupriavidus sp. SK-3
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025563.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14200.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Cupriavidus sp. SK-3"
                     /db_xref="taxon:1470558"
     Protein         1..683
                     /product="RICIN domain-containing protein"
                     /calculated_mol_wt=71260
     Region          81..205
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cd00161"
                     /db_xref="CDD:467293"
     Site            order(85..87,98,100,107..108)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(131..132,144,146,155..156)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(179..181,193,195,202..203)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Region          283..323
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          290..559
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          437..481
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          485..536
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          584..682
                     /region_name="E_set_GO_C"
                     /note="C-terminal Early set domain associated with the
                     catalytic domain of galactose oxidase; cd02851"
                     /db_xref="CDD:199882"
ORIGIN      
        1 mswnawprld gsgtgqstta eqqhqttnpp anfamtlisl qsngftrall kwigaclvll
       61 awtfsapaaa qtgamslsgk nlcadvsgas tangapvivw acsgdpnqrw tftadgtgyk
      121 itvghtgdcl dinnvstang aaaiqwpcqv paannqrftl kqqnggyavv avhsgkclsa
      181 tgkanaqqgq avaqytcdgs vsqtwllpnl nittlpskwt apkalslvpv aaanlpsgkv
      241 lvwsaydrft fggdngqtyt alfdpvamts teklvtntah dmfcpgianl pdgrifvngg
      301 ssstktsiyd patakwsvap emnrgrgyeg svtlsnggvf tvggswsgai gdkdgetwmp
      361 nnpwrlnsai wddyiltgds aglyrsdnha wlfasangrv fhagpskqmn widttgdgsv
      421 tpvgtraadg damngnavmy digkiltvgg apdyenttst anahvidits gtpvvrklas
      481 mayarafgns vvlpngqvvv iggqtvpvpf sddgavltpe lwdpatekfq klaamatprt
      541 yhsvalllpd grvlsggggl cgdcttnhpn veilsppyll nadgtaatrp tissapgdal
      601 lgttisvttn tpvakfalvr mssvthsvnn eqrrvpvtft vgtagenlik ipsdpgvavp
      661 gyyylfamns agvpsvakvi rvh
//
LOCUS       WP_235185135             262 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6884 domain-containing protein [Cupriavidus sp. SK-3].
ACCESSION   WP_235185135
VERSION     WP_235185135.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-3
  ORGANISM  Cupriavidus sp. SK-3
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF045163.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21818.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Cupriavidus sp. SK-3"
                     /db_xref="taxon:1470558"
     Protein         1..262
                     /product="DUF6884 domain-containing protein"
                     /calculated_mol_wt=28691
ORIGIN      
        1 mqpdsmlmls ttqlplfpla ptlcndtaep alllmacsgs kldrdaraid lyrgvmyqsy
       61 rahlrtdaap svlilsarhg flhpdteiap ydermtrqra demmadlssy lrprawptrv
      121 gsvmlaggae yrrvmraala rrygptlpvl qesyggigmq rsqlgaflag lkpafrdqig
      181 qhangtpifr aygrivagdv atlryraapa lpprqarvls vfngpsgpta dvevedlvrg
      241 rtricprwvs vadlhtstke pa
//
LOCUS       WP_235185141             283 aa            linear   BCT 02-MAR-2025
DEFINITION  SNF2 helicase-associated domain-containing protein, partial
            [Cupriavidus sp. SK-3].
ACCESSION   WP_235185141
VERSION     WP_235185141.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-3
  ORGANISM  Cupriavidus sp. SK-3
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023835.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12419.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Cupriavidus sp. SK-3"
                     /db_xref="taxon:1470558"
     Protein         <1..>283
                     /product="SNF2 helicase-associated domain-containing
                     protein"
     Region          4..>278
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          161..>278
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            192..198
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
ORIGIN      
        1 pklesagivv rmpgvwqagr parpvvkasv garpptllgk dalldfsmev sldgerlsas
       61 evrdllkgad glqlirgrwi evdkkklsrl mkrfeameka aqtglpfnea lrlltgvsld
      121 esadpaerdw sqlvagpwla dilqelrqpe glaqispgpe lkanlrpyqq vgvrwlyllt
      181 rlglgaclad dmglgktmqv lslllvlkre saevrpsllv apasllanwa aeaerfapgl
      241 rlliahpsvm paadlraldp arladidlvi tsygsllrqp glg
//
LOCUS       WP_235185194              62 aa            linear   BCT 02-MAR-2025
DEFINITION  hydantoinase/oxoprolinase N-terminal domain-containing protein,
            partial [Cupriavidus sp. SK-3].
ACCESSION   WP_235185194
VERSION     WP_235185194.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-3
  ORGANISM  Cupriavidus sp. SK-3
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
REFERENCE   1  (residues 1 to 62)
  AUTHORS   Ye,G.J., Breslow,E.B. and Meister,A.
  TITLE     The amino acid sequence of rat kidney 5-oxo-L-prolinase determined
            by cDNA cloning
  JOURNAL   J Biol Chem 271 (50), 32293-32300 (1996)
   PUBMED   8943290
  REMARK    Erratum:[J Biol Chem 1997 Feb 14;272(7):4646. Guo-jie GE [corrected
            to Ye GJ]]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017215.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05378.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..62
                     /organism="Cupriavidus sp. SK-3"
                     /db_xref="taxon:1470558"
     Protein         1..>62
                     /product="hydantoinase/oxoprolinase N-terminal
                     domain-containing protein"
     Region          18..>62
                     /region_name="HyuA"
                     /note="N-methylhydantoinase A/oxoprolinase/acetone
                     carboxylase, beta subunit [Amino acid transport and
                     metabolism, Secondary metabolites biosynthesis, transport
                     and catabolism]; COG0145"
                     /db_xref="CDD:439915"
ORIGIN      
        1 mslpfsaahv sdrrrwqfwi drggtftdvv glrpdgtvvt hkllsenpeq ysdaavagir
       61 hl
//
LOCUS       WP_235185227             378 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Cupriavidus sp. SK-3].
ACCESSION   WP_235185227
VERSION     WP_235185227.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-3
  ORGANISM  Cupriavidus sp. SK-3
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Cupriavidus sp. SK-3"
                     /db_xref="taxon:1470558"
     Protein         1..378
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=41659
     Region          81..332
                     /region_name="PRK09685"
                     /note="DNA-binding transcriptional activator FeaR;
                     Provisional"
                     /db_xref="CDD:236612"
ORIGIN      
        1 mtayrlaqpq pppepaagis htrfeagtat gtrssagqil awrdrvghvi dldltkeqva
       61 rpfaaaidry lvedmvftdc rcdgvnlnrt varistdamr hyvfqvfigg naglvegrrr
      121 nptprhggil ltdlgqparm vrdpshalsf fvprplmdai fpdaesahgs ivetntpmtm
      181 lavehvtvla gelphmtpeq aapalreaih llvaafrqaa rlegdarsat rnamlararr
      241 lidhsahqpd isptgllaam nisrpslyrl feheggvhay irkrklraaa selvrfpnlp
      301 vieiayglgf ssasdftraf rraygmspsd lrieaasprr ealmraalkv qgqdyerwlr
      361 rhltshersa ndsayrgp
//
LOCUS       WP_235185233             344 aa            linear   BCT 02-MAR-2025
DEFINITION  FecR domain-containing protein [Cupriavidus sp. SK-3].
ACCESSION   WP_235185233
VERSION     WP_235185233.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-3
  ORGANISM  Cupriavidus sp. SK-3
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
REFERENCE   1  (residues 1 to 344)
  AUTHORS   Van Hove,B., Staudenmaier,H. and Braun,V.
  TITLE     Novel two-component transmembrane transcription control: regulation
            of iron dicitrate transport in Escherichia coli K-12
  JOURNAL   J Bacteriol 172 (12), 6749-6758 (1990)
   PUBMED   2254251
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04773.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Cupriavidus sp. SK-3"
                     /db_xref="taxon:1470558"
     Protein         1..344
                     /product="FecR domain-containing protein"
                     /calculated_mol_wt=36531
     Region          26..341
                     /region_name="PRK09774"
                     /note="fec operon regulator FecR; Reviewed"
                     /db_xref="CDD:236622"
ORIGIN      
        1 mtdpagpagk spapespipa rivdqaitwt iqldfgepta streafaqwl aadplhelaw
       61 qrmqalrddf sgmppalald tlqtagarrg asglrrrqal kvlalagisv vavqgvrela
      121 pwqrlladts tatgeqrtvr lddgstivln tdtaistglg gerrlvtlrr geilvttgyd
      181 drfaaasgaa rpfwvqtpfg slralgtrfv vrigdgrarv svqegavaly pstggtgdva
      241 qagtswwlan ggsapapaqt fdadgwasgv iagkdmrlad vlaelaryrt grivcdprva
      301 dlrisgayhl rdtdqtlrfl aqsqpvavvy rtrfwvtvep aggs
//
LOCUS       WP_235185234              74 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Cupriavidus sp.
            SK-3].
ACCESSION   WP_235185234
VERSION     WP_235185234.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-3
  ORGANISM  Cupriavidus sp. SK-3
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Cupriavidus sp. SK-3"
                     /db_xref="taxon:1470558"
     Protein         1..74
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=8001
     Region          <9..65
                     /region_name="CitB"
                     /note="DNA-binding response regulator, NarL/FixJ family,
                     contains REC and HTH domains [Signal transduction
                     mechanisms, Transcription]; COG2197"
                     /db_xref="CDD:441799"
ORIGIN      
        1 meqseawklt paekdvvlll vkglsleeia glresraktv rqhaanvyak aqlegrhqla
       61 ayfledlmap aavg
//
LOCUS       WP_235185288             331 aa            linear   BCT 02-MAR-2025
DEFINITION  ChbG/HpnK family deacetylase [Cupriavidus sp. SK-3].
ACCESSION   WP_235185288
VERSION     WP_235185288.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-3
  ORGANISM  Cupriavidus sp. SK-3
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
REFERENCE   1  (residues 1 to 331)
  AUTHORS   Lai,X. and Ingram,L.O.
  TITLE     Cloning and sequencing of a cellobiose phosphotransferase system
            operon from Bacillus stearothermophilus XL-65-6 and functional
            expression in Escherichia coli
  JOURNAL   J Bacteriol 175 (20), 6441-6450 (1993)
   PUBMED   8407820
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016668.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04794.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Cupriavidus sp. SK-3"
                     /db_xref="taxon:1470558"
     Protein         1..331
                     /product="ChbG/HpnK family deacetylase"
                     /calculated_mol_wt=36219
     Region          81..311
                     /region_name="GH38-57_N_LamB_YdjC_SF"
                     /note="Catalytic domain of glycoside hydrolase (GH)
                     families 38 and 57, lactam utilization protein LamB/YcsF
                     family proteins, YdjC-family proteins, and similar
                     proteins; cl49606"
                     /db_xref="CDD:483946"
ORIGIN      
        1 mstddrilgs rsfrfgalsh tgrgvaprgr nrdrvwaaar igavalgslr agachgsglp
       61 sgrafslpat rlalektmrs liinaddfgy dedtvkatis cfegglltsa tilagcpasr
      121 laydyarqhr kqlsfglhfn ivegrlaaqa gksslsggdg mlrpckaqrv ramagllaek
      181 direafrqql telrdhgvqv thvdghghlh kypaviraik qemlqagikw arrpqncyfq
      241 knairgalnv wllhhfsglr htdyyiaadp repgwalrlp ailrdgvtem svhpgftepw
      301 rrdesaplle paelaaklks agialrrygd l
//
LOCUS       WP_235185322             363 aa            linear   BCT 02-MAR-2025
DEFINITION  M30 family zinc metallopeptidase [Staphylococcus agnetis].
ACCESSION   WP_235185322
VERSION     WP_235185322.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus agnetis
  ORGANISM  Staphylococcus agnetis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021943.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10460.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Staphylococcus agnetis"
                     /db_xref="taxon:985762"
     Protein         1..363
                     /product="M30 family zinc metallopeptidase"
                     /EC_number="3.4.24.-"
                     /calculated_mol_wt=41340
     Region          <122..333
                     /region_name="Peptidase_M30"
                     /note="Peptidase M30; pfam10460"
                     /db_xref="CDD:431298"
ORIGIN      
        1 mfkapkektp itertrkseq slsnsklddv rsfttvnlrt nanertaakl kyngkntnvw
       61 vadnyitdkq aknigeefdn kidplvkekf gepsdvdhdg kvnilvydik ddfettgsyt
      121 ggyfhprdly dvphsnkaev fymdtypsmg tdknnlnekk vystlaheyq hmvnanqkll
      181 keqkedgmdv wldeafamas ehmylqkpld hrieyynnst sianghslik wnhrgdvlsn
      241 yalsylfsqy lsaqsdngdk ifkeilqdpa dtsealenai hkhvdpkmsl gefmtnfrvs
      301 lekkeatglh gfkgepgfns ispkpvrelp qtlapqgsvm fettspiqip kdkdenieyv
      361 kvk
//
LOCUS       WP_235185352             275 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Staphylococcus agnetis].
ACCESSION   WP_235185352
VERSION     WP_235185352.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus agnetis
  ORGANISM  Staphylococcus agnetis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 275)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 275)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Staphylococcus agnetis"
                     /db_xref="taxon:985762"
     Protein         1..275
                     /product="VOC family protein"
                     /calculated_mol_wt=31327
     Region          6..129
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
     Region          156..>275
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mskiighhhi smytknitrn kafyidvlgl dliketvnqd netmphifyg nasgdpgtll
       61 tffeiplagt vhkgtnmiar igllvqdrnm ldlfevklek hgistqrgky lhqdvlyfdd
      121 petlsfvmia negyklpahw hisneetstt satimgmgpi eihvediast ahyltehlgy
      181 rkregfeeav ytlneqgfys divliqqdgp qvrpgkgyvh hhafaikkad mpaildihdh
      241 lphqhsgvin rqwfeslyyr qnfityefat iepgf
//
LOCUS       WP_235185419             415 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaA ATPase domain-containing protein [Desulfonatronum
            thiodismutans].
ACCESSION   WP_235185419
VERSION     WP_235185419.1
KEYWORDS    RefSeq.
SOURCE      Desulfonatronum thiodismutans
  ORGANISM  Desulfonatronum thiodismutans
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfonatronaceae;
            Desulfonatronum.
REFERENCE   1  (residues 1 to 415)
  AUTHORS   Erzberger,J.P., Pirruccello,M.M. and Berger,J.M.
  TITLE     The structure of bacterial DnaA: implications for general
            mechanisms underlying DNA replication initiation
  JOURNAL   EMBO J 21 (18), 4763-4773 (2002)
   PUBMED   12234917
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012529.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00308.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Desulfonatronum thiodismutans"
                     /db_xref="taxon:159290"
     Protein         1..415
                     /product="DnaA ATPase domain-containing protein"
                     /calculated_mol_wt=46286
     Region          72..406
                     /region_name="dnaA"
                     /note="chromosomal replication initiator protein DnaA;
                     cl42516"
                     /db_xref="CDD:455861"
ORIGIN      
        1 masstipvnv sgtsigrdgr versvpqral rhsvsadrqh alplpvsapv pmvrmtgnst
       61 edgagfdtgr wrfsfrdfvv gpsnelafsa arsicrhqlv tdqfylcsap glgkthllqa
      121 igqeltangg tkqgrvrlay ltaedfacrm vmalkqreme sfkagfrdgv dvllledihf
      181 lqgkektqee llatvkslrg agkkvvftss flpkelpkld sllasqfcdg fmavidkpdf
      241 etrmrileak arvfqvqiph dvnelfansi qsdirllenc lqnlvikarl mnqrithgla
      301 levlknyaph tpkpdlekii aficrsfnls hgslrtksrk kenvlarnti fylarkhtdl
      361 slknigeafn rkhstvikgi tqveremsrq spvgrqmdrl vqtletqttg cntih
//
LOCUS       WP_235185093             158 aa            linear   BCT 02-MAR-2025
DEFINITION  TcpQ domain-containing protein, partial [Cupriavidus sp. SK-3].
ACCESSION   WP_235185093
VERSION     WP_235185093.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-3
  ORGANISM  Cupriavidus sp. SK-3
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
REFERENCE   1  (residues 1 to 158)
  AUTHORS   Bose,N. and Taylor,R.K.
  TITLE     Identification of a TcpC-TcpQ outer membrane complex involved in
            the biogenesis of the toxin-coregulated pilus of Vibrio cholerae
  JOURNAL   J Bacteriol 187 (7), 2225-2232 (2005)
   PUBMED   15774863
REFERENCE   2  (residues 1 to 158)
  AUTHORS   Ogierman,M.A. and Manning,P.A.
  TITLE     TCP pilus biosynthesis in Vibrio cholerae O1: gene sequence of tcpC
            encoding an outer membrane lipoprotein
  JOURNAL   FEMS Microbiol Lett 76 (1-2), 179-184 (1992)
   PUBMED   1358749
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022136.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10671.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Cupriavidus sp. SK-3"
                     /db_xref="taxon:1470558"
     Protein         1..>158
                     /product="TcpQ domain-containing protein"
     Region          99..>158
                     /region_name="TcpQ"
                     /note="Toxin co-regulated pilus biosynthesis protein Q;
                     pfam10671"
                     /db_xref="CDD:431425"
ORIGIN      
        1 msalcacvaa haavptaspf giestgnfep aaplkgdgwq rlaagkkgrs laaveparsv
       61 tsdiapasvp papaasqlaa tpagiapvva sapaapaawt vspadgtfrq lieawaprag
      121 wtvapwelek dvpivgndsi pgdfkaavrr ilsstemt
//
LOCUS       WP_235185536             557 aa            linear   BCT 02-MAR-2025
DEFINITION  FmdE family protein [Desulfonatronum thiodismutans].
ACCESSION   WP_235185536
VERSION     WP_235185536.1
KEYWORDS    RefSeq.
SOURCE      Desulfonatronum thiodismutans
  ORGANISM  Desulfonatronum thiodismutans
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfonatronaceae;
            Desulfonatronum.
REFERENCE   1  (residues 1 to 557)
  AUTHORS   Hochheimer,A., Linder,D., Thauer,R.K. and Hedderich,R.
  TITLE     The molybdenum formylmethanofuran dehydrogenase operon and the
            tungsten formylmethanofuran dehydrogenase operon from
            Methanobacterium thermoautotrophicum. Structures and
            transcriptional regulation
  JOURNAL   Eur J Biochem 242 (1), 156-162 (1996)
   PUBMED   8954165
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014693.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02663.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Desulfonatronum thiodismutans"
                     /db_xref="taxon:159290"
     Protein         1..557
                     /product="FmdE family protein"
                     /calculated_mol_wt=60130
     Region          20..201
                     /region_name="FwdE"
                     /note="Formylmethanofuran dehydrogenase subunit E [Energy
                     production and conversion]; COG2191"
                     /db_xref="CDD:441794"
     Region          223..541
                     /region_name="MoeA_like"
                     /note="This domain is similar to a domain found in a
                     variety of proteins involved in biosynthesis of
                     molybdopterin cofactor, like MoaB, MogA, and MoeA. There
                     this domain is presumed to bind molybdopterin. The exact
                     function of this subgroup is unknown; cd03522"
                     /db_xref="CDD:239599"
     Site            order(457..459,504..505,509,512)
                     /site_type="active"
                     /note="putative MPT binding site [active]"
                     /db_xref="CDD:239599"
ORIGIN      
        1 mtaeeigkea ledqsvyvgs rsfedfvllv rdfhgsaapg lvlggfmvee arrclpedtl
       61 fdaisetthc lpdavqlltp ctigngwlrv inlgryaltl fdkysgsgvr iyldpekvad
      121 wsairtwymk llpkkeqdsa alfaeikaag asvcsletiq vaphllqrkg rggivvcpvc
      181 keaypqldgr icracqgeap yvesmaasva plpravpvdq avgrkvlhdm triepgktkd
      241 avfvkgqein vgdicrlqqm grmrvyvqes eaesgegadw vheneaaeaf aramagegve
      301 lrlppregkv dllavrdgll nverdrleaf nlvpevmcas rhdavlvkqg mtiagtraip
      361 lylsrhlflr amsvlgaepl fsvsplrkak vgvlvtgtev fqglvedkfv pivgskvqal
      421 gsevlasriv pdsreaivaa vrelldlgad mlittaglsv dpddvtrqal qeagaedlly
      481 gapilpgtmt lfgrigsvqv lgipacalff kttsldlflp rllagrsvsr gelarmgags
      541 lcmqcrtcsf pkcpfgk
//
LOCUS       WP_235185689             376 aa            linear   BCT 02-MAR-2025
DEFINITION  hemagglutinin repeat-containing protein, partial [Ralstonia
            pseudosolanacearum].
ACCESSION   WP_235185689
VERSION     WP_235185689.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia pseudosolanacearum
  ORGANISM  Ralstonia pseudosolanacearum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Ralstonia; Ralstonia
            solanacearum species complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024728.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13332.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Ralstonia pseudosolanacearum"
                     /db_xref="taxon:1310165"
     Protein         <1..>376
                     /product="hemagglutinin repeat-containing protein"
     Region          26..159
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          247..>376
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
ORIGIN      
        1 vrdehflaek gflstkttht idsagqtnav gttlsgdtvs vaagrdmtah aatiagtgdv
       61 nlsagrdlti atadtatses hykdvkksgl gsagagisyg thqttdssnd tvrgsqgslv
      121 gstdgsvhmq agrnlhltgs dvvatqnvtg vgqnvtidas stdrhhdeth etkssgftla
      181 vkspvldafq nvmqesdaag nsqngraaal haiaavdgmg gvfgsmggaa tnmgkgqkpe
      241 akielswgst sskntftens tqhngsnika ggtaafvatg dgtpgsgnvt iqgsdvnaqn
      301 vllhaknqvn lvnstdtdst rstnesksvs vgvsygtggw gvsasmskah gdansdastq
      361 nnthvnargt ativsg
//
LOCUS       WP_235185814             281 aa            linear   BCT 02-MAR-2025
DEFINITION  SNF2-related protein [Methylomarinum vadi].
ACCESSION   WP_235185814
VERSION     WP_235185814.1
KEYWORDS    RefSeq.
SOURCE      Methylomarinum vadi
  ORGANISM  Methylomarinum vadi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylomarinum.
REFERENCE   1  (residues 1 to 281)
  AUTHORS   Rowbotham,S.P., Barki,L., Neves-Costa,A., Santos,F., Dean,W.,
            Hawkes,N., Choudhary,P., Will,W.R., Webster,J., Oxley,D.,
            Green,C.M., Varga-Weisz,P. and Mermoud,J.E.
  TITLE     Maintenance of silent chromatin through replication requires
            SWI/SNF-like chromatin remodeler SMARCAD1
  JOURNAL   Mol Cell 42 (3), 285-296 (2011)
   PUBMED   21549307
REFERENCE   2  (residues 1 to 281)
  AUTHORS   Linder,B., Cabot,R.A., Schwickert,T. and Rupp,R.A.
  TITLE     The SNF2 domain protein family in higher vertebrates displays
            dynamic expression patterns in Xenopus laevis embryos
  JOURNAL   Gene 326, 59-66 (2004)
   PUBMED   14729263
REFERENCE   3  (residues 1 to 281)
  AUTHORS   Eisen,J.A., Sweder,K.S. and Hanawalt,P.C.
  TITLE     Evolution of the SNF2 family of proteins: subfamilies with distinct
            sequences and functions
  JOURNAL   Nucleic Acids Res 23 (14), 2715-2723 (1995)
   PUBMED   7651832
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012403.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00176.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Methylomarinum vadi"
                     /db_xref="taxon:438855"
     Protein         1..281
                     /product="SNF2-related protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0140658 - ATP-dependent chromatin
                     remodeler activity [Evidence IEA]"
                     /calculated_mol_wt=31645
     Region          16..>279
                     /region_name="DISARM_DrmD"
                     /note="DISARM system SNF2-like helicase DrmD, long form;
                     NF038317"
                     /db_xref="CDD:468471"
ORIGIN      
        1 mdelyqtssn hfitsvpepg qlvevrrrqw vvsdvqgqsf eangeqhvvt lssldedalg
       61 eelqvvwqie pgaqvlekag mpritgidse dksdafldav rwgavtnadr sflqapfrsg
      121 itiedyqldp lvraidmarv nlliaddvgl gktieaglvv qellvrhrar tvfivcpasl
      181 qvkwqvemwe kfglefrivd tdyikrlrre rgihanpwts fprlitsmdw mksgeglrlv
      241 kdclpptity prkfdiliid eahnvapsta skyalesqri g
//
LOCUS       WP_235185824             188 aa            linear   BCT 02-MAR-2025
DEFINITION  nitrogenase component 1 [Methylomarinum vadi].
ACCESSION   WP_235185824
VERSION     WP_235185824.1
KEYWORDS    RefSeq.
SOURCE      Methylomarinum vadi
  ORGANISM  Methylomarinum vadi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylomarinum.
REFERENCE   1  (residues 1 to 188)
  AUTHORS   Tezcan,F.A., Kaiser,J.T., Mustafi,D., Walton,M.Y., Howard,J.B. and
            Rees,D.C.
  TITLE     Nitrogenase complexes: multiple docking sites for a nucleotide
            switch protein
  JOURNAL   Science 309 (5739), 1377-1380 (2005)
   PUBMED   16123301
REFERENCE   2  (residues 1 to 188)
  AUTHORS   Lawson,D.M. and Smith,B.E.
  TITLE     Molybdenum nitrogenases: a crystallographic and mechanistic view
  JOURNAL   Met Ions Biol Syst 39, 75-119 (2002)
   PUBMED   11913144
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012375.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00148.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Methylomarinum vadi"
                     /db_xref="taxon:438855"
     Protein         1..188
                     /product="nitrogenase component 1"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=20347
     Region          <6..160
                     /region_name="Oxidoreductase_nitrogenase"
                     /note="The nitrogenase enzyme system catalyzes the
                     ATP-dependent reduction of dinitrogen to ammonia. This
                     group contains both alpha and beta subunits of component 1
                     of the three known genetically distinct types of
                     nitrogenase systems: a molybdenum-dependent...; cl02775"
                     /db_xref="CDD:445915"
ORIGIN      
        1 msgwlfssal heisgqevpa kierqrmqlq damldthfml gqlrvavasd pdqlnafahl
       61 lsemgaevva avapssaacl aamplaqvki gdledleiia rdngaqllig nshatdtaer
      121 lnvpilragf pqydiiggyq ktwvgyrgsr qalfdlanlv infaheeipv fhsvyaqkpa
      181 devkpsch
//
LOCUS       WP_235185828             107 aa            linear   BCT 02-MAR-2025
DEFINITION  PIN domain-containing protein [Methylomarinum vadi].
ACCESSION   WP_235185828
VERSION     WP_235185828.1
KEYWORDS    RefSeq.
SOURCE      Methylomarinum vadi
  ORGANISM  Methylomarinum vadi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylomarinum.
REFERENCE   1  (residues 1 to 107)
  AUTHORS   Arcus,V.L., Rainey,P.B. and Turner,S.J.
  TITLE     The PIN-domain toxin-antitoxin array in mycobacteria
  JOURNAL   Trends Microbiol 13 (8), 360-365 (2005)
   PUBMED   15993073
REFERENCE   2  (residues 1 to 107)
  AUTHORS   Gerdes,K., Christensen,S.K. and Lobner-Olesen,A.
  TITLE     Prokaryotic toxin-antitoxin stress response loci
  JOURNAL   Nat Rev Microbiol 3 (5), 371-382 (2005)
   PUBMED   15864262
REFERENCE   3  (residues 1 to 107)
  AUTHORS   Clissold,P.M. and Ponting,C.P.
  TITLE     PIN domains in nonsense-mediated mRNA decay and RNAi
  JOURNAL   Curr Biol 10 (24), R888-R890 (2000)
   PUBMED   11137022
REFERENCE   4  (residues 1 to 107)
  AUTHORS   Makarova,K.S., Aravind,L., Galperin,M.Y., Grishin,N.V.,
            Tatusov,R.L., Wolf,Y.I. and Koonin,E.V.
  TITLE     Comparative genomics of the Archaea (Euryarchaeota): evolution of
            conserved protein families, the stable core, and the variable shell
  JOURNAL   Genome Res 9 (7), 608-628 (1999)
   PUBMED   10413400
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013970.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01850.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Methylomarinum vadi"
                     /db_xref="taxon:438855"
     Protein         1..107
                     /product="PIN domain-containing protein"
                     /calculated_mol_wt=11710
     Region          7..>107
                     /region_name="PIN_SF"
                     /note="PIN (PilT N terminus) domain: Superfamily; cl28905"
                     /db_xref="CDD:475124"
ORIGIN      
        1 mggvtylldt nilseparkk pndnvmqhfa ekdgqyataa ivwhelcygc eclpdskrks
       61 qlqsylamle engliilpyd qaaaewfagq raalksqgnt payadge
//
LOCUS       WP_235185838             603 aa            linear   BCT 02-MAR-2025
DEFINITION  transglycosylase SLT domain-containing protein [Methylomarinum
            vadi].
ACCESSION   WP_235185838
VERSION     WP_235185838.1
KEYWORDS    RefSeq.
SOURCE      Methylomarinum vadi
  ORGANISM  Methylomarinum vadi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylomarinum.
REFERENCE   1  (residues 1 to 603)
  AUTHORS   Koraimann,G.
  TITLE     Lytic transglycosylases in macromolecular transport systems of
            Gram-negative bacteria
  JOURNAL   Cell Mol Life Sci 60 (11), 2371-2388 (2003)
   PUBMED   14625683
REFERENCE   2  (residues 1 to 603)
  AUTHORS   Mushegian,A.R., Fullner,K.J., Koonin,E.V. and Nester,E.W.
  TITLE     A family of lysozyme-like virulence factors in bacterial pathogens
            of plants and animals
  JOURNAL   Proc Natl Acad Sci U S A 93 (14), 7321-7326 (1996)
   PUBMED   8692991
REFERENCE   3  (residues 1 to 603)
  AUTHORS   Thunnissen,A.M., Rozeboom,H.J., Kalk,K.H. and Dijkstra,B.W.
  TITLE     Structure of the 70-kDa soluble lytic transglycosylase complexed
            with bulgecin A. Implications for the enzymatic mechanism
  JOURNAL   Biochemistry 34 (39), 12729-12737 (1995)
   PUBMED   7548026
REFERENCE   4  (residues 1 to 603)
  AUTHORS   Koonin,E.V. and Rudd,K.E.
  TITLE     A conserved domain in putative bacterial and bacteriophage
            transglycosylases
  JOURNAL   Trends Biochem Sci 19 (3), 106-107 (1994)
   PUBMED   8203016
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013618.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01464.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Methylomarinum vadi"
                     /db_xref="taxon:438855"
     Protein         1..603
                     /product="transglycosylase SLT domain-containing protein"
                     /calculated_mol_wt=71465
     Region          16..588
                     /region_name="PRK11619"
                     /note="lytic murein transglycosylase; Provisional"
                     /db_xref="CDD:183236"
ORIGIN      
        1 mqaekyirlh knseyqqlae qlrdyplypy lryqwlkthl dhneeiesfi lkyrttryag
       61 llqnrwlrql aknknwkali khyrssssae lqcdyhwaky nagqkttalk aarklwvvgh
      121 sqpsncdslf nrlikskyft rdmlwqrfqa algndkvqla syieslmstk drdvaelwlk
      181 vhrnpqlvsn gtnwsqggsq aglifahavd riargnsata aeiwdrykdq yiipqhraeq
      241 ierrlalgla frrdkqayar ldklnksdke vrewqirtal reqnwqhvek slkklneqek
      301 rdipwrywla rsyeefgnqe qanklftqls edrsfygfls aykldhkiqi nhrpvpisae
      361 eidkleqrdd frmvaefrai grneeakrqw wyavsrletn dilvaaklae kwqwnqeaif
      421 tiarakywdd mslrfpikys dqvklnaerq eldpaivfgl irresafkqd arspvgargl
      481 mqimpktgrq iarelkekwr svrslydpdv nvkygtfyyk klleqfdgny alaaaaynag
      541 phrvkrwlpe draiaadiwi etipfretra yvsavltyal iyqqrlqrnv lkikdfmrdi
      601 lpg
//
LOCUS       WP_235185911             136 aa            linear   BCT 02-MAR-2025
DEFINITION  prepilin-type N-terminal cleavage/methylation domain-containing
            protein [Methylomarinum vadi].
ACCESSION   WP_235185911
VERSION     WP_235185911.1
KEYWORDS    RefSeq.
SOURCE      Methylomarinum vadi
  ORGANISM  Methylomarinum vadi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylomarinum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019575.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07963.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Methylomarinum vadi"
                     /db_xref="taxon:438855"
     Protein         1..136
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /calculated_mol_wt=14280
     Region          9..>64
                     /region_name="PilV"
                     /note="Type IV pilus assembly protein PilV [Cell motility,
                     Extracellular structures]; COG4967"
                     /db_xref="CDD:443993"
     Region          16..115
                     /region_name="gspI"
                     /note="type II secretion system protein I; TIGR01707"
                     /db_xref="CDD:273767"
ORIGIN      
        1 mnaknglgpg pnrqqgfsll eilvafsima islgillqif ssgvntavia eeytvatqia
       61 eglmattgve tplsigdreg veedkyrwrv siselaplpd veqseavlln vnvtvewgsa
      121 arqielntik aagpaa
//
LOCUS       WP_235185966             144 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2750 domain-containing protein [Methylomarinum vadi].
ACCESSION   WP_235185966
VERSION     WP_235185966.1
KEYWORDS    RefSeq.
SOURCE      Methylomarinum vadi
  ORGANISM  Methylomarinum vadi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylomarinum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022495.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11042.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Methylomarinum vadi"
                     /db_xref="taxon:438855"
     Protein         1..144
                     /product="DUF2750 domain-containing protein"
                     /calculated_mol_wt=16518
     Region          30..127
                     /region_name="DUF2750"
                     /note="Protein of unknown function (DUF2750); pfam11042"
                     /db_xref="CDD:431623"
ORIGIN      
        1 mlkvngftmr yepyedeyaa ipamtdaqll eyfisrvyet eevwglkegg aywmtygrdg
       61 reiqplfayk ryaeeaavgd wevmipvaes leffmertlt rleqndvvle vmpretgrgs
      121 lvtprqlfgi legiidagey tmeg
//
LOCUS       WP_235185962             519 aa            linear   BCT 02-MAR-2025
DEFINITION  PAS domain-containing protein [Methylomarinum vadi].
ACCESSION   WP_235185962
VERSION     WP_235185962.1
KEYWORDS    RefSeq.
SOURCE      Methylomarinum vadi
  ORGANISM  Methylomarinum vadi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylomarinum.
REFERENCE   1  (residues 1 to 519)
  AUTHORS   Hefti,M.H., Francoijs,K.J., de Vries,S.C., Dixon,R. and Vervoort,J.
  TITLE     The PAS fold. A redefinition of the PAS domain based upon
            structural prediction
  JOURNAL   Eur J Biochem 271 (6), 1198-1208 (2004)
   PUBMED   15009198
REFERENCE   2  (residues 1 to 519)
  AUTHORS   Ponting,C.P. and Aravind,L.
  TITLE     PAS: a multifunctional domain family comes to light
  JOURNAL   Curr Biol 7 (11), R674-R677 (1997)
   PUBMED   9382818
REFERENCE   3  (residues 1 to 519)
  AUTHORS   Zhulin,I.B., Taylor,B.L. and Dixon,R.
  TITLE     PAS domain S-boxes in Archaea, Bacteria and sensors for oxygen and
            redox
  JOURNAL   Trends Biochem Sci 22 (9), 331-333 (1997)
   PUBMED   9301332
REFERENCE   4  (residues 1 to 519)
  AUTHORS   Borgstahl,G.E., Williams,D.R. and Getzoff,E.D.
  TITLE     1.4 A structure of photoactive yellow protein, a cytosolic
            photoreceptor: unusual fold, active site, and chromophore
  JOURNAL   Biochemistry 34 (19), 6278-6287 (1995)
   PUBMED   7756254
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020036.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08447.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Methylomarinum vadi"
                     /db_xref="taxon:438855"
     Protein         1..519
                     /product="PAS domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=59296
     Region          2..515
                     /region_name="KinE"
                     /note="Sporulation sensor histidine kinase E [Cell cycle
                     control, cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG5809"
                     /db_xref="CDD:444511"
ORIGIN      
        1 mrnkveseyr nkethlravi nvsptaiyil spredndsps fftdpnchlh lafisaaiek
       61 itgftvreyl vdpklwmsrv hpedvanvme syglcqsqna vnnqyrclhk ngeyrwlher
      121 lvvqrgrnge ivqvigslmd vsdivktheq lhilssaveq spcpifitnt kgtieyansk
      181 lleitgfseq evlghtprif ssgctevsiy adlwntitag kkwygtirnk kkngqhfwvk
      241 esiapikncn detthfvaiq edvstmvnas eeleqqlkdh tekiklleqq rseqrksvai
      301 grmaawvahe innplagikn sfqllksaip dthkffryvd lidkeidris litkqlysly
      361 kqedararef dcnmmieeii llstlgkkqv nidhisadkt cyvklqenlv rqilfnlikn
      421 avdhspgqst ikidaqrrna elyvmieneg tfitdeqlek lfepfystks dsqscslglg
      481 ltivdnfvkl mhgemkltnk mtggliselt ipldyyknk
//
LOCUS       WP_235185803             135 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF302 domain-containing protein [Methylomarinum vadi].
ACCESSION   WP_235185803
VERSION     WP_235185803.1
KEYWORDS    RefSeq.
SOURCE      Methylomarinum vadi
  ORGANISM  Methylomarinum vadi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylomarinum.
REFERENCE   1  (residues 1 to 135)
  AUTHORS   Kishishita,S., Tatsuguchi,A., Ushikoshi-Nakayama,R., Terada,T.,
            Kuramitsu,S., Park,S.Y., Tame,J.R., Shirouzu,M. and Yokoyama,S.
  TITLE     Crystal structure of a conserved hypothetical protein TT1751 from
            Thermus thermophilus HB8
  JOURNAL   Proteins 57 (4), 883-887 (2004)
   PUBMED   15481054
REFERENCE   2  (residues 1 to 135)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015581.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03625.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Methylomarinum vadi"
                     /db_xref="taxon:438855"
     Protein         1..135
                     /product="DUF302 domain-containing protein"
                     /calculated_mol_wt=15339
     Region          7..130
                     /region_name="COG3439"
                     /note="Uncharacterized conserved protein, DUF302 family
                     [Function unknown]"
                     /db_xref="CDD:442664"
ORIGIN      
        1 mqqspnsqfi hyyqaetlkp yddvlaelev aiaehnfrit ghsrvgkvir ergaenfpef
       61 dtiqfcnlth artlleisph lvsympcnvv tyqfqgktvi kthllpedsd nqslnafaak
      121 mnkklkqivd faaee
//
LOCUS       WP_235186027             273 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4328 domain-containing protein [Microbacterium oleivorans].
ACCESSION   WP_235186027
VERSION     WP_235186027.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium oleivorans
  ORGANISM  Microbacterium oleivorans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025580.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14219.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Microbacterium oleivorans"
                     /db_xref="taxon:273677"
     Protein         1..273
                     /product="DUF4328 domain-containing protein"
                     /calculated_mol_wt=29051
     Region          20..50
                     /region_name="DUF2510"
                     /note="Protein of unknown function (DUF2510); pfam10708"
                     /db_xref="CDD:431450"
     Region          119..265
                     /region_name="DUF4328"
                     /note="Domain of unknown function (DUF4328); pfam14219"
                     /db_xref="CDD:433782"
ORIGIN      
        1 mdrarnvggd amtegtstpa gwypaphagn elrywngvdw tehaapaapg seqtptsigy
       61 pgaypaaats avvrplrgia gatrililvs aatsfltvlv eawglnaidg fsrgtaplsa
      121 lelydtlssf valasaasll aagicwvvwq yraavrvraa npmstrrtpv whvvswfipv
      181 iafwfpfqnm kdlivasrad vratllgwww glwiasttfv tvssrmsiaa dslpgysaam
      241 nvslfaellt iasaplavmv ltrttnalep apr
//
LOCUS       WP_235186089             180 aa            linear   BCT 02-MAR-2025
DEFINITION  septum formation family protein [Microbacterium oleivorans].
ACCESSION   WP_235186089
VERSION     WP_235186089.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium oleivorans
  ORGANISM  Microbacterium oleivorans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 180)
  AUTHORS   Slayden,R.A., Knudson,D.L. and Belisle,J.T.
  TITLE     Identification of cell cycle regulators in Mycobacterium
            tuberculosis by inhibition of septum formation and global
            transcriptional analysis
  JOURNAL   Microbiology (Reading) 152 (Pt 6), 1789-1797 (2006)
   PUBMED   16735741
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025215.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13845.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Microbacterium oleivorans"
                     /db_xref="taxon:273677"
     Protein         1..180
                     /product="septum formation family protein"
                     /calculated_mol_wt=19042
     Region          <59..159
                     /region_name="Septum_form"
                     /note="Septum formation; pfam13845"
                     /db_xref="CDD:433522"
ORIGIN      
        1 mstrrlrsia lgavglvvaa pllsgcseav lyqlsgavyr dasgeitvgg eldvfdlvag
       61 dcfdesdavs pratedsvfv vqaipcvdph tyevyhvfvl pngdypgede aaeaadqgcl
      121 pafedfvgqp wedstleysf ytpaesgwdg idkdrmvqcf igdegvivkg saaddgrqss
//
LOCUS       WP_235186026             255 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Microbacterium
            oleivorans].
ACCESSION   WP_235186026
VERSION     WP_235186026.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium oleivorans
  ORGANISM  Microbacterium oleivorans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 255)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 255)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 255)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 255)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Microbacterium oleivorans"
                     /db_xref="taxon:273677"
     Protein         1..255
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=26888
     Region          14..231
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            45..52
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213179"
     Site            order(48..49,51..53,99,180..181,213)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:213179"
     Site            96..99
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213179"
     Site            156..165
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213179"
     Site            176..181
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213179"
     Site            184..187
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213179"
     Site            209..215
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213179"
ORIGIN      
        1 mprvtdpdaa iytsdlsiar asadtrvvdg vslrvlpget iavmgatgsg ksslasclag
       61 adhrdlrvvg gmgevagisl raggrarrir ayrtghlaqg vnstlpsrlt iseivaepit
      121 ardrkvnera lalrvaslld elqlpigase kypyelssgm rqrvaiarsl vldpkvliad
      181 eplanldvdv rpavrdallr rtadgmallv vtnerdlvtd lgaqvlvlra ghpvgvgprl
      241 ddvlwtpdea triag
//
LOCUS       WP_235186170             492 aa            linear   BCT 02-MAR-2025
DEFINITION  phospholipase D-like domain-containing protein [Lysobacter
            antibioticus].
ACCESSION   WP_235186170
VERSION     WP_235186170.1
KEYWORDS    RefSeq.
SOURCE      Lysobacter antibioticus
  ORGANISM  Lysobacter antibioticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Lysobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13091.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Lysobacter antibioticus"
                     /db_xref="taxon:84531"
     Protein         1..492
                     /product="phospholipase D-like domain-containing protein"
                     /calculated_mol_wt=53920
     Region          76..275
                     /region_name="PLDc_SF"
                     /note="Catalytic domain of phospholipase D superfamily
                     proteins; cl15239"
                     /db_xref="CDD:472788"
     Site            order(221,223,239,241,249)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197200"
     Site            221
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197200"
     Region          304..457
                     /region_name="PLDc_unchar2_2"
                     /note="Putative catalytic domain, repeat 2, of
                     uncharacterized phospholipase D-like proteins; cd09130"
                     /db_xref="CDD:197228"
     Site            order(397,399,416,418,430)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197228"
     Site            397
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197228"
ORIGIN      
        1 mnieldppap rrrrwlrsaf avfalawlat gvyhvykplp pgisqhwplr sadnvelltd
       61 vswvdgakqr laeqhifdet lrligqaqrg vvadlflfnd fgadagnlrh rrlsnelsaa
      121 liarkravpq lravlitdpi ntvygglesp qlqalraagv evvitdlrrl rtpnptwsgl
      181 wnlccswagn daqggwlanp fgsgkvtlrs wfalfnlnan hrktlvvdeg dgwtalvssa
      241 nphdgssrhg nialrfrgaa aldvlmsera vvamshghwp qglpvaappp tivdttsapr
      301 vqllteakir dgllaaidga rggdridiav fyfshrdlvh avvaahkrgv alrvlldpne
      361 dafgrkkdgv pnrqvaselq aagvplrwcd thgeqchakl llktardgri eliagsanyt
      421 rrnlddynle ssvrvvaesd apvarqaagy feqswgngdh rgisvdyaay adesgwrklw
      481 yrfgeasgls sy
//
LOCUS       WP_235186268              42 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6290 family protein [Enterococcus].
ACCESSION   WP_235186268
VERSION     WP_235186268.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus
  ORGANISM  Enterococcus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039402.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19807.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..42
                     /organism="Enterococcus"
                     /db_xref="taxon:1350"
     Protein         1..42
                     /product="DUF6290 family protein"
                     /calculated_mol_wt=4607
     Region          1..>40
                     /region_name="DUF6290"
                     /note="Family of unknown function (DUF6290); cl46766"
                     /db_xref="CDD:481106"
ORIGIN      
        1 mseitirvse eeksfilama dlkgltitel artmivgrle kn
//
LOCUS       WP_235186355             980 aa            linear   BCT 02-MAR-2025
DEFINITION  lysozyme family protein [Enterococcus mundtii].
ACCESSION   WP_235186355
VERSION     WP_235186355.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus mundtii
  ORGANISM  Enterococcus mundtii
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13702.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..980
                     /organism="Enterococcus mundtii"
                     /db_xref="taxon:53346"
     Protein         1..980
                     /product="lysozyme family protein"
                     /calculated_mol_wt=112799
     Region          <530..623
                     /region_name="NlpD"
                     /note="Murein DD-endopeptidase MepM and murein hydrolase
                     activator NlpD, contains LysM domain [Cell
                     wall/membrane/envelope biogenesis]; COG0739"
                     /db_xref="CDD:440502"
     Region          685..838
                     /region_name="CwlT-like"
                     /note="CwlT-like N-terminal lysozyme domain and similar
                     domains; cd16891"
                     /db_xref="CDD:381612"
     Site            order(712,725..727,730,749,771..772)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:381612"
     Region          876..957
                     /region_name="CHAP"
                     /note="CHAP domain; pfam05257"
                     /db_xref="CDD:461605"
ORIGIN      
        1 mkllngnnpr ikrnsqqasf qrkqrkndkn nvnpepsdst nkgksvntqs ihrrkrvres
       61 rrdelkqqqh dsmmrpnkvd ptiapapvtn nntdqkkeka ntqaifnqkn rhqqireqqk
      121 knttykgyts kaklekqqgq qekissnttn irhknqkral hlskneqlek kkrnnkrkeg
      181 kkkvavkrdm rtkldnmlkn qispknpfkn kikdliidkv grdeegnlnl vgmiitvllm
      241 lqlplllkli iiilivavvi aiisifvsfw ttilslfvvk tesmmiteay nyvtwldtyk
      301 nkevydtynr lvddsehdev yfevngiesd peqfmyisng dnyiyylnak fedydignia
      361 iatyrkrvae ktdvwipwsl rnrtyavfhd aphplssepi kvftvkdeih alhdmvynyt
      421 tviekdkeve tivitadket geehtevkre kknvatvkin vqtigemfds epevevyvsr
      481 rysgdddyyg rviafdddei dkyypimekd rfedkifman pfgkmnyanv vdnfgyrrrd
      541 pntqhyqial eaepgtpvya ttfeevesin ygyyaghtdg sgarttaiet dtgqyyayyv
      601 nidpvvrpgr nleagdligy trnqfngnll vamkeyrfwh kdpdvypaiy idnlafstdt
      661 nlaymrnggg lhgnlinppl avtkwqnrva eqtskhgiea ytnailsmiw vesggneaiq
      721 pdiinaqlal sslekittpe esiekgveyf ayllkkaqsn nlnglaavqa ynygeayldd
      781 likrnapysf edarlyaqmk snnqtmpfnh ivaqglgynw ryafgnmfyt tmvtrnimad
      841 tgrlaelark elgnpngeky wrwagfnnrm ewsavfvswl aneagyleqg rvlntanvld
      901 mkewfeandk fkthdenyvp qsgdlvffdw sgertgkdhv giveysggni iqviegnsdn
      961 lvrrrtyaig snvisgyglp
//
LOCUS       WP_235186375             414 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [Enterococcus].
ACCESSION   WP_235186375
VERSION     WP_235186375.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus
  ORGANISM  Enterococcus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Enterococcus"
                     /db_xref="taxon:1350"
     Protein         1..414
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47591
     Region          34..401
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(37..38,41..42,45,77,130..131,133..135,138,155,
                     158..159,162,238,241..242,245..247,250,277,281,330..331,
                     335,339,360,363..364,367..368,371)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340893"
ORIGIN      
        1 mpliknerdr lgeilqsiil kvdmvvknkf qfiyffqyal mailmtqivp fltgqgydav
       61 qrgwflasys vttiifqifi gyysdrskql kkvsmvvsil fvcfaitfyl lvkdvwmihl
      121 ivlaiaggls ntgatvldnw vlsesemrnn laaikaigsl gwsvisvcip ffifnnnyqw
      181 livpflffli sylyiaktvp qtpqdkneyk eqkseefnls dmyqlcknre flchtllffl
      241 lyltivannt ividklflmd sgnmyvglkw aiqafceipa ylllnhsvtk wknerllfis
      301 gfflvlqflv yatsrtplvl laasflqfft vpaftigsrm iiseitpknv fssgqllsis
      361 vymglssfvs pllggilaqq lsldqalyff smlpifafic yycyrkyqrn krki
//
LOCUS       WP_235186430              58 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Vibrio cholerae].
ACCESSION   WP_235186430
VERSION     WP_235186430.1
KEYWORDS    RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024573.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13175.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..58
                     /organism="Vibrio cholerae"
                     /db_xref="taxon:666"
     Protein         1..58
                     /product="AAA family ATPase"
                     /calculated_mol_wt=6184
     Region          1..>57
                     /region_name="COG4637"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443675"
ORIGIN      
        1 miqtlsilny rsikrlslsl dvlnvitgsn asgktnlyna lrllsrscyg nvnsalai
//
LOCUS       WP_235186432              54 aa            linear   BCT 02-MAR-2025
DEFINITION  RepB family protein [Vibrio cholerae].
ACCESSION   WP_235186432
VERSION     WP_235186432.1
KEYWORDS    RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 54)
  AUTHORS   Khan,S.A.
  TITLE     Rolling-circle replication of bacterial plasmids
  JOURNAL   Microbiol Mol Biol Rev 61 (4), 442-455 (1997)
   PUBMED   9409148
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022183.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10723.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..54
                     /organism="Vibrio cholerae"
                     /db_xref="taxon:666"
     Protein         1..54
                     /product="RepB family protein"
                     /GO_process="GO:0006276 - plasmid maintenance [Evidence
                     IEA]"
                     /calculated_mol_wt=6301
ORIGIN      
        1 mkrswsqqky rlsvkdkksi nlrvdneiek kinklcadsk ltksqliell lknk
//
LOCUS       WP_235186504             292 aa            linear   BCT 02-MAR-2025
DEFINITION  type II secretion system F family protein [Micrococcus luteus].
ACCESSION   WP_235186504
VERSION     WP_235186504.1
KEYWORDS    RefSeq.
SOURCE      Micrococcus luteus
  ORGANISM  Micrococcus luteus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Micrococcus.
REFERENCE   1  (residues 1 to 292)
  AUTHORS   Peabody,C.R., Chung,Y.J., Yen,M.R., Vidal-Ingigliardi,D.,
            Pugsley,A.P. and Saier,M.H.
  TITLE     Type II protein secretion and its relationship to bacterial type IV
            pili and archaeal flagella
  JOURNAL   Microbiology (Reading) 149 (Pt 11), 3051-3072 (2003)
   PUBMED   14600218
REFERENCE   2  (residues 1 to 292)
  AUTHORS   Py,B., Loiseau,L. and Barras,F.
  TITLE     An inner membrane platform in the type II secretion machinery of
            Gram-negative bacteria
  JOURNAL   EMBO Rep 2 (3), 244-248 (2001)
   PUBMED   11266368
REFERENCE   3  (residues 1 to 292)
  AUTHORS   Stathopoulos,C., Hendrixson,D.R., Thanassi,D.G., Hultgren,S.J., St
            Geme,J.W. 3rd and Curtiss,R. 3rd.
  TITLE     Secretion of virulence determinants by the general secretory
            pathway in gram-negative pathogens: an evolving story
  JOURNAL   Microbes Infect 2 (9), 1061-1072 (2000)
   PUBMED   10967286
REFERENCE   4  (residues 1 to 292)
  AUTHORS   Salmond,G.P. and Reeves,P.J.
  TITLE     Membrane traffic wardens and protein secretion in gram-negative
            bacteria
  JOURNAL   Trends Biochem Sci 18 (1), 7-12 (1993)
   PUBMED   8438237
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11449670
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Micrococcus luteus"
                     /db_xref="taxon:1270"
     Protein         1..292
                     /product="type II secretion system F family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /calculated_mol_wt=30624
     Region          133..288
                     /region_name="TadC"
                     /note="Flp pilus assembly protein TadC [Extracellular
                     structures]; COG2064"
                     /db_xref="CDD:441667"
ORIGIN      
        1 mtsaliwaal lgltlgagll lilvtqpvgw rpsleqrvep qlrhhipasr lleeeragas
       61 pwgawgrild pvvqagvgwv qrispggval drklaaagla vtstdfraqq vlsgaagaav
      121 aavlalsltv tgrvpvitgv alviaggmag fllreqllsl rvrrrreail sefpsvaelf
      181 alsvgagesa agaleriagt argelagefr ttladmraga slsaalkamg rrvqlapver
      241 figgvliald rgtpladvlr aqaqdvremg rrelmeaagr keiqmmvphv kr
//
LOCUS       WP_235186505             414 aa            linear   BCT 02-MAR-2025
DEFINITION  trypsin-like serine protease [Micrococcus luteus].
ACCESSION   WP_235186505
VERSION     WP_235186505.1
KEYWORDS    RefSeq.
SOURCE      Micrococcus luteus
  ORGANISM  Micrococcus luteus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Micrococcus.
REFERENCE   1  (residues 1 to 414)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Families of serine peptidases
  JOURNAL   Methods Enzymol 244, 19-61 (1994)
   PUBMED   7845208
REFERENCE   2  (residues 1 to 414)
  AUTHORS   Sprang,S., Standing,T., Fletterick,R.J., Stroud,R.M.,
            Finer-Moore,J., Xuong,N.H., Hamlin,R., Rutter,W.J. and Craik,C.S.
  TITLE     The three-dimensional structure of Asn102 mutant of trypsin: role
            of Asp102 in serine protease catalysis
  JOURNAL   Science 237 (4817), 905-909 (1987)
   PUBMED   3112942
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012318.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00089.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Micrococcus luteus"
                     /db_xref="taxon:1270"
     Protein         1..414
                     /product="trypsin-like serine protease"
                     /EC_number="3.4.21.-"
                     /GO_function="GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=40083
ORIGIN      
        1 mrtrtltgva taalgavvva gagpalaqtt ltqgsaitap agacsltivd dataytaahc
       61 gagqwqigst vrdvdgtaig tvsalpgdsg vdavrvalad dvdvvgdwst rpassigvge
      121 tvythgssvp lgapntvsht qtfeaatvcd dayadqvald tastyagdsg gavydaqqrv
      181 vgvisgiapv tfdaegnvvg cdaqamssim vpvesldald asaapaaeta aaaetaaaae
      241 tapaaetapa iadvagpvad edlptggepa vdeselteft paeeeaiaae lkaraeaaae
      301 eeaaesapaa etpaaeaaap gvtdvvaapa egvaygtqvv aqtdqggfas vtvtaydadg
      361 tvlgqdgldl tgeyrawlpv paevpaggsv vvtvvdaaga atdatvtlgg qlvg
//
LOCUS       WP_235186516             193 aa            linear   BCT 02-MAR-2025
DEFINITION  glycine betaine ABC transporter substrate-binding protein
            [Micrococcus luteus].
ACCESSION   WP_235186516
VERSION     WP_235186516.1
KEYWORDS    RefSeq.
SOURCE      Micrococcus luteus
  ORGANISM  Micrococcus luteus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Micrococcus.
REFERENCE   1  (residues 1 to 193)
  AUTHORS   Fraser,K.R., Harvie,D., Coote,P.J. and O'Byrne,C.P.
  TITLE     Identification and characterization of an ATP binding cassette
            L-carnitine transporter in Listeria monocytogenes
  JOURNAL   Appl Environ Microbiol 66 (11), 4696-4704 (2000)
   PUBMED   11055912
REFERENCE   2  (residues 1 to 193)
  AUTHORS   Kappes,R.M., Kempf,B., Kneip,S., Boch,J., Gade,J., Meier-Wagner,J.
            and Bremer,E.
  TITLE     Two evolutionarily closely related ABC transporters mediate the
            uptake of choline for synthesis of the osmoprotectant glycine
            betaine in Bacillus subtilis
  JOURNAL   Mol Microbiol 32 (1), 203-216 (1999)
   PUBMED   10216873
REFERENCE   3  (residues 1 to 193)
  AUTHORS   Kempf,B. and Bremer,E.
  TITLE     OpuA, an osmotically regulated binding protein-dependent transport
            system for the osmoprotectant glycine betaine in Bacillus subtilis
  JOURNAL   J Biol Chem 270 (28), 16701-16713 (1995)
   PUBMED   7622480
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015995.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04069.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Micrococcus luteus"
                     /db_xref="taxon:1270"
     Protein         1..193
                     /product="glycine betaine ABC transporter
                     substrate-binding protein"
                     /GO_component="GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=20291
     Region          <14..173
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mlsssagvlr ltavvtqtta arlelesitd lngwceslta vapppltaaa dpdaatalra
       61 rldrlagcrp etwladtedp taavvadeaq valltgtdpe idantlvple ddgrvlpegr
      121 ltavgsaatl dddaerriae vmsaldgdgl relerlttga dplpvaeaaq ywlvdqgled
      181 apedwfvprg swf
//
LOCUS       WP_235186520             310 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Micrococcus
            luteus].
ACCESSION   WP_235186520
VERSION     WP_235186520.1
KEYWORDS    RefSeq.
SOURCE      Micrococcus luteus
  ORGANISM  Micrococcus luteus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Micrococcus.
REFERENCE   1  (residues 1 to 310)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Micrococcus luteus"
                     /db_xref="taxon:1270"
     Protein         1..310
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=33248
     Region          3..287
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(97,104,107..108,110..111,114,122,124,127,171,
                     204..205,224..225,231..232,234..235,254)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176106"
     Site            order(98,148,196..197,202)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:176106"
ORIGIN      
        1 meirhlrafv avaeerhfgr aaerlhiaqp plsqqikqle aalgvtller ttrrvdltda
       61 grlmldrsrq lladlgsleh dvrevgrgaa gilrvgfvgs athrlmpaiv raareampgv
      121 rlhitgekit peleeallen rldvavlrpp vraaqlrlap lesgrlvlal paghrlaaed
      181 dpvslgslad edfvsypqds alasvvqeaa rrvgfrprlv qragetstvm afvaaglgva
      241 vvpdevrrsg aapgvtfrpl tdlphvelai agkadvrspl vpafvelarr taaelaagea
      301 dpndpprrpe
//
LOCUS       WP_235186566             209 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing protein [Dyella japonica].
ACCESSION   WP_235186566
VERSION     WP_235186566.1
KEYWORDS    RefSeq.
SOURCE      Dyella japonica
  ORGANISM  Dyella japonica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Rhodanobacteraceae; Dyella.
REFERENCE   1  (residues 1 to 209)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01966.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Dyella japonica"
                     /db_xref="taxon:231455"
     Protein         1..209
                     /product="HD domain-containing protein"
                     /calculated_mol_wt=23448
     Region          17..>106
                     /region_name="RnaY"
                     /note="HD superfamily phosphodieaserase, includes HD
                     domain of RNase Y [Translation, ribosomal structure and
                     biogenesis, General function prediction only]; COG1418"
                     /db_xref="CDD:441028"
ORIGIN      
        1 mianiyvpdt alvaraieyv rdcyepylfn hvmrswlfas riaelqgvpy daeilavstl
       61 lhdlglvkaf dgplrfeveg anaarafahk eglderrtql iwdsvalnst psiglhkese
      121 valctmgisv dwgsgwcyds vdtpamnsiv eafprlrmke rfaraicgiv esrpettydt
      181 fardfgerfv pnyrppslvd slfnspfee
//
LOCUS       WP_235186578             148 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1579 family protein [Dyella japonica].
ACCESSION   WP_235186578
VERSION     WP_235186578.1
KEYWORDS    RefSeq.
SOURCE      Dyella japonica
  ORGANISM  Dyella japonica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Rhodanobacteraceae; Dyella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019247.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07617.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Dyella japonica"
                     /db_xref="taxon:231455"
     Protein         1..148
                     /product="DUF1579 family protein"
                     /calculated_mol_wt=16352
     Region          5..146
                     /region_name="DUF1579"
                     /note="Protein of unknown function (DUF1579); pfam07617"
                     /db_xref="CDD:429561"
ORIGIN      
        1 mssnmlarla gewqgeetia ttrwgqggpa tsrvtaslql ngrilvqdyr eerdgktslq
       61 ahavfvgepe hdqyslywfd sygfvpgtpa pglwngerlt fvrssprgqt rhayvfegdg
      121 aytlklessf dggvswepvm tgtyrrla
//
LOCUS       WP_235186612             193 aa            linear   BCT 02-MAR-2025
DEFINITION  1-acyl-sn-glycerol-3-phosphate acyltransferase [Dyella japonica].
ACCESSION   WP_235186612
VERSION     WP_235186612.1
KEYWORDS    RefSeq.
SOURCE      Dyella japonica
  ORGANISM  Dyella japonica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Rhodanobacteraceae; Dyella.
REFERENCE   1  (residues 1 to 193)
  AUTHORS   Neuwald,A.F.
  TITLE     Barth syndrome may be due to an acyltransferase deficiency
  JOURNAL   Curr Biol 7 (8), R465-R466 (1997)
   PUBMED   9259571
REFERENCE   2  (residues 1 to 193)
  AUTHORS   Bione,S., D'Adamo,P., Maestrini,E., Gedeon,A.K., Bolhuis,P.A. and
            Toniolo,D.
  TITLE     A novel X-linked gene, G4.5. is responsible for Barth syndrome
  JOURNAL   Nat Genet 12 (4), 385-389 (1996)
   PUBMED   8630491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013702.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01553.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Dyella japonica"
                     /db_xref="taxon:231455"
     Protein         1..193
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /GO_function="GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=21858
     Region          21..182
                     /region_name="LPLAT"
                     /note="Lysophospholipid acyltransferases (LPLATs) of
                     glycerophospholipid biosynthesis; cl17185"
                     /db_xref="CDD:473073"
     Site            order(49,52,54,73..76,124..126)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153250"
ORIGIN      
        1 mlppappeap klnsrfwpwf arcllrlsgw kligqlpnep kliiigaphs sywdgyygll
       61 mkiglgvdin imikrevldg plglilrpig mipinrsaal nvvdqmvqrf rdkdrmwlgi
      121 tpegtrkkvk nwksgflria hdanvpiqtl fldypsktft fgpvvratdd pdadmvrira
      181 lftpyrgkhr dan
//
LOCUS       WP_235186630             520 aa            linear   BCT 02-MAR-2025
DEFINITION  MASE1 domain-containing protein [Dyella japonica].
ACCESSION   WP_235186630
VERSION     WP_235186630.1
KEYWORDS    RefSeq.
SOURCE      Dyella japonica
  ORGANISM  Dyella japonica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Rhodanobacteraceae; Dyella.
REFERENCE   1  (residues 1 to 520)
  AUTHORS   Pfiffer,V., Sarenko,O., Possling,A. and Hengge,R.
  TITLE     Genetic dissection of Escherichia coli's master diguanylate cyclase
            DgcE: Role of the N-terminal MASE1 domain and direct signal input
            from a GTPase partner system
  JOURNAL   PLoS Genet 15 (4), e1008059 (2019)
   PUBMED   31022167
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 520)
  AUTHORS   Lacey,M., Agasing,A., Lowry,R. and Green,J.
  TITLE     Identification of the YfgF MASE1 domain as a modulator of bacterial
            responses to aspartate
  JOURNAL   Open Biol 3 (6), 130046 (2013)
   PUBMED   23740576
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 520)
  AUTHORS   Nikolskaya,A.N., Mulkidjanian,A.Y., Beech,I.B. and Galperin,M.Y.
  TITLE     MASE1 and MASE2: two novel integral membrane sensory domains
  JOURNAL   J Mol Microbiol Biotechnol 5 (1), 11-16 (2003)
   PUBMED   12673057
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05231.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Dyella japonica"
                     /db_xref="taxon:231455"
     Protein         1..520
                     /product="MASE1 domain-containing protein"
                     /calculated_mol_wt=57686
     Region          7..516
                     /region_name="UhpB"
                     /note="Signal transduction histidine kinase UhpB,
                     glucose-6-phosphate specific [Signal transduction
                     mechanisms]; COG3851"
                     /db_xref="CDD:443060"
ORIGIN      
        1 mgiavsygll iylvrqvsit hfllltgvhl tvllltryrd wpalvigeva alipitiecl
       61 dqwgygvpwg lfnivpgivv mapvvwlvre rwpimtsrht lnmgsllgca lvlsfvmtgy
      121 niasmtvmnl pagyvahydk lcvewvlgny lgilavtpva lfahqlfnga rlrevgvrll
      181 dnrtvldsif lviptllllv wiglesarvr qiaqvamflp ivwlamrhgw qgaaiggtas
      241 slavvalmpa tydqqtmqae aivafaissm lllgarigal hqhaeqermd vrmalalaqr
      301 nvhigemqlr ttslaleqir etvqasfsmm msrlrhlqpt iedrsyhrqa lvaqdqlfrl
      361 adslypvswr erglpaalre gaipraldet gvgywcdlrg plsrlsqtlh laiyrlvvev
      421 vadacakrni sevivrvrcg ekggrrwalv smifrdtast sgnvrwdell prvmrstsgm
      481 gwagirdram tfegdarehl iangrrvsll lldpitisgv
//
LOCUS       WP_235186679             230 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Geobacillus sp. FW23].
ACCESSION   WP_235186679
VERSION     WP_235186679.1
KEYWORDS    RefSeq.
SOURCE      Geobacillus sp. FW23
  ORGANISM  Geobacillus sp. FW23
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Anoxybacillaceae; Geobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024868.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13477.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Geobacillus sp. FW23"
                     /db_xref="taxon:1048208"
     Protein         1..230
                     /product="glycosyltransferase"
                     /calculated_mol_wt=26430
     Region          3..>222
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mikvahvcts sfshkilvdk ltllkqrgyd ihlvsskegy neklmqnydf klhfihmnrk
       61 ihvlddvvsi fhmvrlfrke kyqivhthta kagiigrvag rlagvpvvih tshglpfyeg
      121 qsklkyytyr flekigawfc daiasqnred mkkieqyapr qrvyyegngv dlsklddrnk
      181 hisceqital knrlgipndq kvilvgarfe pvkdhfflle afplgafpgt
//
LOCUS       WP_235186788             496 aa            linear   BCT 02-MAR-2025
DEFINITION  glucosyltransferase domain-containing protein [Serratia sp. DD3].
ACCESSION   WP_235186788
VERSION     WP_235186788.1
KEYWORDS    RefSeq.
SOURCE      Serratia sp. DD3
  ORGANISM  Serratia sp. DD3
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 496)
  AUTHORS   Mavris,M., Manning,P.A. and Morona,R.
  TITLE     Mechanism of bacteriophage SfII-mediated serotype conversion in
            Shigella flexneri
  JOURNAL   Mol Microbiol 26 (5), 939-950 (1997)
   PUBMED   9426131
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025622.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14264.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Serratia sp. DD3"
                     /db_xref="taxon:1410619"
     Protein         1..496
                     /product="glucosyltransferase domain-containing protein"
                     /calculated_mol_wt=56484
     Region          15..>216
                     /region_name="Glucos_trans_II"
                     /note="Glucosyl transferase GtrII; cl23811"
                     /db_xref="CDD:451558"
ORIGIN      
        1 mnkqisarna fvfvltccml yafpiiladv yyrddfervl npaagwytlg rptadllmrl
       61 fsfnifeltd tapftlllgi lfiswvlwtv akrnetilti gslcpyilll ispfflqnis
      121 ykydslpmia alaisilayf yprdrgvksy lipmaylfla ltlyqpctni figlygvnll
      181 igfnknsrsp lqetlwagvv llsayilyfv iinkmlgmsg grdamvplpe ladylikhtk
      241 ilihyiksai trelkiilyv tslcvvyaff lnvynflqdk qwsvstllsl llmvlspivi
      301 flaflgplfl lregmtdvrv lsgvsatlfl hgyslvvvlr klkpkwmlls lvpvfyftav
      361 sfqyanavkn qhiyedrifs wliydlmavn annhgkifin nypgtapitq tivnhqaiid
      421 lmytpsygwi srrtlysmgl nnvdlgwgdn ygdmlqtvcs ssstplkdnk fytiyavgdn
      481 tlvwfknkfk tlcgkr
//
LOCUS       WP_235186816             829 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Serratia sp. DD3].
ACCESSION   WP_235186816
VERSION     WP_235186816.1
KEYWORDS    RefSeq.
SOURCE      Serratia sp. DD3
  ORGANISM  Serratia sp. DD3
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Serratia sp. DD3"
                     /db_xref="taxon:1410619"
     Protein         <1..>829
                     /product="Ig-like domain-containing protein"
     Region          <123..583
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          <357..>829
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 envtlvrvgk alhviqegdt qasiiiedyf ngeannpvll gmaedgqlya yvplsgegye
       61 hgylftdges spvalggpsq gsgegifvas ddnqdalfgl lgwlaaatai gagaavayhn
      121 rskddnndpe ptppakpaig galdhtgsiq gqiknggqtd eshptlsgkg vagniitvyd
      181 ngsaigsvvi dgngnwtftp dqamgdgshq mvitetdpsg nvsspsdpln ftvdttppdv
      241 pgmqhvmdkt gdvvgeikpg dstddprpvl tgsgqpgdtv tiydngnvig etvvnddgrw
      301 sfqpetpmtd gkhnitvset dpvgneskqs ggwefnvdtq apskpaigsv iddvgavtgp
      361 ltsgtttddt qpelkgmgqp gdviiisdng kpigstvvng qgewsyqvee plaegnhslt
      421 vsevdpagna stpsdpiviv vdttapgqpd vsnaqddvga itgaiknggt tddtqpkfsg
      481 ggqpgdiini ydngekigst vvgdngkwsf tpetpldetn hsitttatdp agneskpsep
      541 lnftvdttsp lvdpehlait svedrvgnet gnvtsgnstd dsqplisgig tagdiiivyt
      601 tdatgnhpig stkvldngtw sltpttplle gnnqltivav daagnkttps tpsydinldi
      661 tipsepaits vlddvepkag alqkgdvtnd ntptlkgsae anslvkvydk geligsttad
      721 gkgewsftpa agaelkdgnh tltitstdaa gnesapsgsf divvdtnvpn sagdivitdn
      781 vgektgevnp gdttddrspn lsgtgepggt vtiydngeei gtakieddg
//
LOCUS       WP_235186835             362 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Frankia sp.
            CeD].
ACCESSION   WP_235186835
VERSION     WP_235186835.1
KEYWORDS    RefSeq.
SOURCE      Frankia sp. CeD
  ORGANISM  Frankia sp. CeD
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 362)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Frankia sp. CeD"
                     /db_xref="taxon:258230"
     Protein         1..362
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=38498
     Region          10..331
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(14,16..17,19,39..41,76..78,115..117,144,148,
                     172..175)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187551"
     Site            order(93,117,144,148)
                     /site_type="active"
                     /db_xref="CDD:187551"
ORIGIN      
        1 mtptxsnlki vvvgatgnvg tsvlaalgrs aevgslvgvs rrtptwtapk trwaqadvvt
       61 ddlaplfqga dvvihlawlf qpthnplttw rtnvlgsirv feavaragvp alvhassvga
      121 yspaaregiv degwpthgwp eaaytrekay lervldtfer dypgirvvrl rpgfifkrea
      181 asqqrrllag pllpgrvvrp aaapthpatv pvlpdlpglr fqvvhssdva dayrlaaltg
      241 argafniaad pvvdvpllad ilnariirmp aglargalat awhlhlvpas pqlfdavlhl
      301 pimdtxrart elgwsprhda raaigsfltg lregaglptp pltpstarsr weevrtgmgq
      361 ra
//
LOCUS       WP_235186895             428 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme [Frankia sp.
            CeD].
ACCESSION   WP_235186895
VERSION     WP_235186895.1
KEYWORDS    RefSeq.
SOURCE      Frankia sp. CeD
  ORGANISM  Frankia sp. CeD
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Frankia sp. CeD"
                     /db_xref="taxon:258230"
     Protein         1..428
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /calculated_mol_wt=44994
     Region          34..423
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(112..113,198,226,229,247,250)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:99742"
     Site            250
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99742"
ORIGIN      
        1 mdtpsihqpr qrrftdsddp gpnedpeqlr lfhrwraars pssvvhldsa gaarpsrati
       61 aaeaaxlere salgayaaev eagsglhatr arlvslmgpg ldaddlsfhh sasaafasll
      121 mawrlpagar igvvpseygs nmlvlaaral rtavslvdlp vdetgvidve tldragvaca
      181 dapgriglad ldlvvfpqvp sqrgivqpaa aigarcaaeg vplvldvaqs lgqvevrqta
      241 asayigtsrk wlcgprgagf lavrkgsvdl ldiavpslhs arfdrndrpv plpglarlgi
      301 geaatvsrig lgqavteltd sgpslvfari arlagqgrrl ldgaggwrxr edpdspcgii
      361 tmqpppgtdp vavrdrlyre drvltsaipv ersrdltgpv lrasahvytd paeferlamg
      421 leriaydr
//
LOCUS       WP_235186961             336 aa            linear   BCT 02-MAR-2025
DEFINITION  CAP domain-containing protein [Frankia sp. CeD].
ACCESSION   WP_235186961
VERSION     WP_235186961.1
KEYWORDS    RefSeq.
SOURCE      Frankia sp. CeD
  ORGANISM  Frankia sp. CeD
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 336)
  AUTHORS   Gibbs,G.M., Roelants,K. and O'Bryan,M.K.
  TITLE     The CAP superfamily: cysteine-rich secretory proteins, antigen 5,
            and pathogenesis-related 1 proteins--roles in reproduction, cancer,
            and immune defense
  JOURNAL   Endocr Rev 29 (7), 865-897 (2008)
   PUBMED   18824526
REFERENCE   2  (residues 1 to 336)
  AUTHORS   Milne,T.J., Abbenante,G., Tyndall,J.D., Halliday,J. and Lewis,R.J.
  TITLE     Isolation and characterization of a cone snail protease with
            homology to CRISP proteins of the pathogenesis-related protein
            superfamily
  JOURNAL   J Biol Chem 278 (33), 31105-31110 (2003)
   PUBMED   12759345
REFERENCE   3  (residues 1 to 336)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
REFERENCE   4  (residues 1 to 336)
  AUTHORS   Fernandez,C., Szyperski,T., Bruyere,T., Ramage,P., Mosinger,E. and
            Wuthrich,K.
  TITLE     NMR solution structure of the pathogenesis-related protein P14a
  JOURNAL   J Mol Biol 266 (3), 576-593 (1997)
   PUBMED   9067611
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012415.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00188.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Frankia sp. CeD"
                     /db_xref="taxon:258230"
     Protein         1..336
                     /product="CAP domain-containing protein"
                     /calculated_mol_wt=34964
     Region          18..150
                     /region_name="TerD_like"
                     /note="Uncharacterized proteins involved in stress
                     response, similar to tellurium resistance terD; cd06974"
                     /db_xref="CDD:132992"
     Region          207..334
                     /region_name="YkwD"
                     /note="Spore germination protein YkwD and related proteins
                     with CAP (CSP/antigen 5/PR1) domain [Cell cycle control,
                     cell division, chromosome partitioning, General function
                     prediction only]; COG2340"
                     /db_xref="CDD:441910"
ORIGIN      
        1 mpgangplpa gpvsvrlagp fdvcalvtga ngkvaadsdf vfynqprapg valsggavtv
       61 dpgrlrlgae rvviaasped gttpfgrlpa lavtihndhd xliarfappp lsretvvtlv
      121 eiyrrgpawk iravgqgyad glaglardfg vdiddgdqgh qghqghqghq ghqghqghqg
      181 qghqgqgqrr dppgypdstg rgtregdltl vlarvvtltn aerareglap ltvddrxaaa
      241 aeahsvdmat rgffahtspe grtvsdrvsa lgyryaqvae niaagqssad evvtgwmnsp
      301 ghranilipr lrqigvgqat ggeygrywtq vfgtll
//
LOCUS       WP_235187026             139 aa            linear   BCT 02-MAR-2025
DEFINITION  site-specific integrase, partial [Frankia sp. CeD].
ACCESSION   WP_235187026
VERSION     WP_235187026.1
KEYWORDS    RefSeq.
SOURCE      Frankia sp. CeD
  ORGANISM  Frankia sp. CeD
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 139)
  AUTHORS   Subramanya,H.S., Arciszewska,L.K., Baker,R.A., Bird,L.E.,
            Sherratt,D.J. and Wigley,D.B.
  TITLE     Crystal structure of the site-specific recombinase, XerD
  JOURNAL   EMBO J 16 (17), 5178-5187 (1997)
   PUBMED   9311978
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014898.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02899.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Frankia sp. CeD"
                     /db_xref="taxon:258230"
     Protein         1..>139
                     /product="site-specific integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          81..>137
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
ORIGIN      
        1 mgvtdgdrvf rlrppaasas gvggssdhrp saprpgpddl agpddlagpd dlagpddppr
       61 padhragsql sqlrgtpagv ierylhhleg erglarnsvl ayrrdlrryc dhlsacglps
      121 ldavgeaeva gfaavlrxx
//
LOCUS       WP_235186823             237 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase family protein [Frankia sp. CeD].
ACCESSION   WP_235186823
VERSION     WP_235186823.1
KEYWORDS    RefSeq.
SOURCE      Frankia sp. CeD
  ORGANISM  Frankia sp. CeD
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 237)
  AUTHORS   Kapitonov,V.V. and Jurka,J.
  TITLE     Harbinger transposons and an ancient HARBI1 gene derived from a
            transposase
  JOURNAL   DNA Cell Biol 23 (5), 311-324 (2004)
   PUBMED   15169610
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13359.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Frankia sp. CeD"
                     /db_xref="taxon:258230"
     Protein         1..237
                     /product="transposase family protein"
                     /calculated_mol_wt=26179
     Region          12..212
                     /region_name="transpos_IS5_4"
                     /note="IS5 family transposase; NF033581"
                     /db_xref="CDD:468098"
ORIGIN      
        1 mladdraqrq twrklsphgq allvlahlrn gdtyerlaeg fgvsvgtvyn yvreavdlla
       61 trgrsrlaav wtfawtqsnf lildgtvvrt trvrahnkly ysgkhkyhgi nlqgltdpyg
      121 rmiwiseglp gsvhdltaar mhdilhvidr selhlfadkg yvggegdhll vpykkppggd
      181 lsdqlkeinr axaaxrarge rgfailknwh ifdrxrgxpr rvgkfalaaf ilteeei
//
LOCUS       WP_235187040             204 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3515 family protein [Frankia sp. CeD].
ACCESSION   WP_235187040
VERSION     WP_235187040.1
KEYWORDS    RefSeq.
SOURCE      Frankia sp. CeD
  ORGANISM  Frankia sp. CeD
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023453.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12028.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Frankia sp. CeD"
                     /db_xref="taxon:258230"
     Protein         1..204
                     /product="DUF3515 family protein"
                     /calculated_mol_wt=20901
     Region          80..198
                     /region_name="DUF3515"
                     /note="Protein of unknown function (DUF3515); pfam12028"
                     /db_xref="CDD:432272"
ORIGIN      
        1 mgapgsrlap tagagppvts varqnrdmat ggeqaergrr parggrrpgr scrypvfvas
       61 wvllalvgcg gpgsirltnv pipaesvrss cvdlvhdlpp slgddldrrt ldppqataaa
      121 ygaapvvltc gapglpasyr pdamlsvvdd vgwfaenlgg ttvrystptr qpqvvlxlpa
      181 dvqafevlvs vapavrahsr stts
//
LOCUS       WP_235187049            1038 aa            linear   BCT 02-MAR-2025
DEFINITION  FtsK/SpoIIIE domain-containing protein [Frankia sp. CeD].
ACCESSION   WP_235187049
VERSION     WP_235187049.1
KEYWORDS    RefSeq.
SOURCE      Frankia sp. CeD
  ORGANISM  Frankia sp. CeD
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 1038)
  AUTHORS   Begg,K.J., Dewar,S.J. and Donachie,W.D.
  TITLE     A new Escherichia coli cell division gene, ftsK
  JOURNAL   J Bacteriol 177 (21), 6211-6222 (1995)
   PUBMED   7592387
REFERENCE   2  (residues 1 to 1038)
  AUTHORS   Wu,L.J. and Errington,J.
  TITLE     Bacillus subtilis SpoIIIE protein required for DNA segregation
            during asymmetric cell division
  JOURNAL   Science 264 (5158), 572-575 (1994)
   PUBMED   8160014
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013727.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01580.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Frankia sp. CeD"
                     /db_xref="taxon:258230"
     Protein         1..1038
                     /product="FtsK/SpoIIIE domain-containing protein"
                     /GO_function="GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=106926
     Region          <442..661
                     /region_name="T7SS_EccC_a"
                     /note="type VII secretion protein EccCa; TIGR03924"
                     /db_xref="CDD:274858"
ORIGIN      
        1 mvvggldaeh gntqcgevdv sgtrrartlv agiqsslgaa laladrldeq adrietevgs
       61 gasgkagasg kaggpgesga grldvagela raaviarsra rgfagaswaa pdwrhgpfgv
      121 apvgdrarfr palwqvgqvi vppddptaqh rtvplaipll dglnlriett rssrpaavdl
      181 vrglltrvla aapagwvrlv vydphefgag lagfaplraa gvatptlttr arleevlael
      241 saevgritvd rlggrfdslr ereeaglprs epwrvlvllg eprlhdegar alaaiaaqgp
      301 scgxxvisiv evrpsgvepv lggsrddpda vtpldpdvgg lgadededsv teplprsvvf
      361 tavelladrp gwrgaaaggw rtsltgllrv eldppphsml vaavaaqvaa aatreaarpp
      421 aisdmlprgl wefdsaagvg vevaqgpdgp vgftfdddtv halvggqags gkstllldvi
      481 ygiaarxgpd qvrfhlldfk eglefaqfaa gptdpfylph adtvgiesdr efgvavlrav
      541 reqmrrrava mravgardlr glraadrssa wpriivvvde fqvmltpmds vareavahle
      601 vlarqgrayg vhlllasqtl sgidaldata gkrgsifgqf alrvalrtsi sesrvllsta
      661 neaagalsgv geaivnrrng hpagnelvrv afpdpaaigv lrgrlaatta rsvpnarppr
      721 vfaghapavl ddnpiyqald grpaptavea vaaeaiigdg getgpsllag gaspgracgs
      781 gsgsgdgaen dvdplalvgv pldlappavg vrlaalpgrh lavlgplrre avgilqaaaa
      841 svaaqvpagg lvveiivaep malaaaevla arvrraghpv rvadvtglrs vlagaadetr
      901 vreesaltgs vgpvapplrl vvvfamdagr agleardpvt rrtglddlrt ltrrgpaqrv
      961 hllgwwrgvs rlaedlgpgn rddiaawvaa gvpgsdlfvl aghrsvtggt mpnrallfdr
     1021 hvqaeprtvv pfapldqg
//
LOCUS       WP_235187083             738 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase [Frankia sp. CeD].
ACCESSION   WP_235187083
VERSION     WP_235187083.1
KEYWORDS    RefSeq.
SOURCE      Frankia sp. CeD
  ORGANISM  Frankia sp. CeD
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 738)
  AUTHORS   de la Cruz,J., Kressler,D. and Linder,P.
  TITLE     Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and
            related families
  JOURNAL   Trends Biochem Sci 24 (5), 192-198 (1999)
   PUBMED   10322435
REFERENCE   2  (residues 1 to 738)
  AUTHORS   Aubourg,S., Kreis,M. and Lecharny,A.
  TITLE     The DEAD box RNA helicase family in Arabidopsis thaliana
  JOURNAL   Nucleic Acids Res 27 (2), 628-636 (1999)
   PUBMED   9862990
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012492.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00270.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Frankia sp. CeD"
                     /db_xref="taxon:258230"
     Protein         1..738
                     /product="DEAD/DEAH box helicase"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=79604
     Region          39..>364
                     /region_name="Lhr"
                     /note="Lhr-like helicase [Replication, recombination and
                     repair]; COG1201"
                     /db_xref="CDD:440814"
ORIGIN      
        1 misrtsaasg asgasgasga pgfaaldpav qyhvvnslrw palrplqeaa irpvldghdv
       61 lllaptaggk teavalplls rmagekwrgl svlyvcplra llnnleprla amcewlgrra
      121 avwhgdvads vrgrlavdpp dlllttpesi eamlvsarvd hrwlfaglrt vvvdevhafa
      181 gddrgwhllg vlarlrglan rpvqriglsa tvgnpdvlld wladgsarpr avvrpsdvta
      241 ttdvtattda tattevgidy vgslrnaalv varlhqgmkr lvfcdsrsqv eeltvalrdl
      301 gvrtyvshss lsrddrrqae aafatstncv ivatstlelg idvgdldrvi qigapatvis
      361 flqrlgrtgr rpgtrrntlf latsqnslwl aaaitllwqr gyvepvvppv lprhivaqqi
      421 lglalqegrl vdrdvwqwlg glartpgavd vlahlassgf vvhtdglvsi gpraekeygr
      481 ryfldltstf agesmvqvww grsllgqlpp ialaarpehg prvvllggra wkvnhvdwrr
      541 rrvqvepsry pgrsrwngga rvmsyplaqa hldvlagqta gieisrraad aldklraqhs
      601 fvsvsvsdep gertyltrdp ekrpiwwtfa gfaansalas glgelvdada pvgdlrlrlr
      661 phvnsaalrt mldvrrddlv dalpaidvea adglkfsaai plelaietla arltdpsavh
      721 atlkaiiree tapppggw
//
LOCUS       WP_235187002             199 aa            linear   BCT 02-MAR-2025
DEFINITION  RyR domain-containing protein [Frankia sp. CeD].
ACCESSION   WP_235187002
VERSION     WP_235187002.1
KEYWORDS    RefSeq.
SOURCE      Frankia sp. CeD
  ORGANISM  Frankia sp. CeD
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 199)
  AUTHORS   Ponting,C.P.
  TITLE     Novel repeats in ryanodine and IP3 receptors and protein
            O-mannosyltransferases
  JOURNAL   Trends Biochem Sci 25 (2), 48-50 (2000)
   PUBMED   10664581
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014124.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02026.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Frankia sp. CeD"
                     /db_xref="taxon:258230"
     Protein         1..199
                     /product="RyR domain-containing protein"
                     /calculated_mol_wt=21822
     Region          <118..>167
                     /region_name="RyR"
                     /note="RyR domain; pfam02026"
                     /db_xref="CDD:460419"
ORIGIN      
        1 mdalrpigas rpawadavgg dggvggtpsv lgdgelveql araihdryle helgkrhaag
       61 xrpglrpwae lsealxeanr dqavhyetvl rnrgwvctpa eqdvdpavdp fslsaaevee
      121 laraehdrwr qhkerqgysy gpvredlgpd krhpsmvdwe elteedrdrd rdairnmpav
      181 laradlcitr rpaaeaair
//
LOCUS       WP_235187100             521 aa            linear   BCT 02-MAR-2025
DEFINITION  FHA domain-containing protein [Frankia sp. CeD].
ACCESSION   WP_235187100
VERSION     WP_235187100.1
KEYWORDS    RefSeq.
SOURCE      Frankia sp. CeD
  ORGANISM  Frankia sp. CeD
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 521)
  AUTHORS   Pallen,M., Chaudhuri,R. and Khan,A.
  TITLE     Bacterial FHA domains: neglected players in the phospho-threonine
            signalling game?
  JOURNAL   Trends Microbiol 10 (12), 556-563 (2002)
   PUBMED   12564991
REFERENCE   2  (residues 1 to 521)
  AUTHORS   Durocher,D., Henckel,J., Fersht,A.R. and Jackson,S.P.
  TITLE     The FHA domain is a modular phosphopeptide recognition motif
  JOURNAL   Mol Cell 4 (3), 387-394 (1999)
   PUBMED   10518219
REFERENCE   3  (residues 1 to 521)
  AUTHORS   Hofmann,K. and Bucher,P.
  TITLE     The FHA domain: a putative nuclear signalling domain found in
            protein kinases and transcription factors
  JOURNAL   Trends Biochem Sci 20 (9), 347-349 (1995)
   PUBMED   7482699
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012708.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00498.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Frankia sp. CeD"
                     /db_xref="taxon:258230"
     Protein         1..521
                     /product="FHA domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=56477
     Region          16..>237
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     Region          422..521
                     /region_name="FHA"
                     /note="Forkhead associated (FHA) domain, binds pSer, pThr,
                     pTyr [Signal transduction mechanisms]; COG1716"
                     /db_xref="CDD:441322"
ORIGIN      
        1 msgqeryexr pedggrapyg adapgrsadg nrrrgpaeqt gpdadgpdgy dplgirrspa
       61 dlpgvtdppr ggdprggday ggxgrxgypd qsrggrgyqe dpygppggyd rapyprgrde
      121 rpapddridh grdpygrdwg tpenrggypv grdsreervp ggypdldprd prdpydrdpy
      181 srghddradr ggyptgrdsr eervpggypd ldprdprdpy drdpysrghd dradrggypt
      241 grdsrtpggy pdprgdldre sdthrrsrrd aeygygadpl gmdasappap agdrvtqsrg
      301 gnprhttdpr httdprharp gadprlsdpr lsdprlgdpr lgdprlgdpr lgdpelggtr
      361 gghvdprdav lddpragagr gagwdrdras agstvweaiv eaereyydsg ddhrvpfptf
      421 yprrvfalag sqmlvgrrse srgihpdidl sgapedpgis rshalfellp dggyavrdpg
      481 stngtrlnde pdpiepgqpv plrdgdrvyl gawtritlra r
//
LOCUS       WP_235187268             833 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Frankia sp. CeD].
ACCESSION   WP_235187268
VERSION     WP_235187268.1
KEYWORDS    RefSeq.
SOURCE      Frankia sp. CeD
  ORGANISM  Frankia sp. CeD
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 833)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Frankia sp. CeD"
                     /db_xref="taxon:258230"
     Protein         1..>833
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..198
                     /region_name="entF"
                     /note="enterobactin non-ribosomal peptide synthetase EntF;
                     PRK10252"
                     /db_xref="CDD:236668"
     Region          195..622
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation domain of nonribosomal
                     peptide synthetases (NRPSs) and similar domains; cd19540"
                     /db_xref="CDD:380463"
     Region          660..>833
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(818,821..826,828..829)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
ORIGIN      
        1 mkirgfriep geieavlsgh pavdqvavla redqpdrkrl vayvvpasgt rfdpgelref
       61 vagrlpeymv pavvvevael pltangkldr aalpapdfga latgrgprta veerlcalfa
      121 evldlxxvga ddgffdlggd sllamrliar vqaelnvgmd iralfaeptp agvaglvgeg
      181 gaaraalvpr prpdviplsy gqarmwflnr lqegsavynt pyalnlsgdl drsalqaalt
      241 dvvrrhealr tvlpdtdgvp rqqilredpe lvivfaaaee lpgllaaeag rgfdvgrepp
      301 lrarlfalse rehvlslvih hvatdawsms vlardlptay aarsrgqaps weplpvqyad
      361 famwqrdllg desdpdslis eqlaywreal adlpaelalp adrprpavas ftggevpiri
      421 spavharltd lvrggrgtlf mvvqsaiavl lsrlgagtdi pigapvagrg dtalddligf
      481 fvntlllrtd vsgdpsfeel larvrernla ayahqdvpfe rlaeefrgra rhpvfqvlla
      541 fqnvpldtpw elpgltvrpv qgdgdavefd lsfsleerrt aagtpagieg vvrysadlfd
      601 rstvrrlaer llgvlervaa dptlrvsqvp vlgaderhrv lqewndtgaa vadgtltgaf
      661 aarvaecpda vavldryvtl ththpdtaan wvaqdryvtl tyarldtaan rvardlvaag
      721 vrsgdrvgvv mersvelvav lvgxvkvgaa yvpvdvewpv vrvgrvlaea gvrvvvaddw
      781 apdlpesvgv vwaggwvdge gecgppavrv gaddvayvmy tsgstgvpkg vav
//
LOCUS       WP_235187273             386 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Frankia sp. CeD].
ACCESSION   WP_235187273
VERSION     WP_235187273.1
KEYWORDS    RefSeq.
SOURCE      Frankia sp. CeD
  ORGANISM  Frankia sp. CeD
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 386)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Frankia sp. CeD"
                     /db_xref="taxon:258230"
     Protein         <1..386
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <31..347
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 vsgvmvqvvw ldrgvgvsgr lllvvhhlvv dgvswrillp dlaaayaacv agggvelepv
       61 gtafrrwall araqaqdpvr vaelpvwqri ltgddvllgd rpldpardva ssmrqlsfsv
      121 slevtaallt tvptlfhagi ndvllaglaa avtewrrrrg dgaseaivid leghgrepla
      181 edvelsrtvg wftrvhpvrl elpdvdladl raggpaagri ikevkeqvra vpgeglgygl
      241 lrhlnpatrp vlaalptpqi afnylgrfag arrtgedtdw qpigldgeag dlpaahvlea
      301 ggavrdgadg peltvslawp pgvlaepavr elgegwvaml tglaehaarp eagghtpsdf
      361 pllelgqrqv eqfeamaaei ekgtss
//
LOCUS       WP_235187291             229 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: fibronectin type III-like domain-contianing protein
            [Paenibacillus].
ACCESSION   WP_235187291
VERSION     WP_235187291.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus
  ORGANISM  Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Pozzo,T., Pasten,J.L., Karlsson,E.N. and Logan,D.T.
  TITLE     Structural and functional analyses of beta-glucosidase 3B from
            Thermotoga neapolitana: a thermostable three-domain representative
            of glycoside hydrolase 3
  JOURNAL   J Mol Biol 397 (3), 724-739 (2010)
   PUBMED   20138890
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025668.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14310.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Paenibacillus"
                     /db_xref="taxon:44249"
     Protein         1..229
                     /product="fibronectin type III-like domain-contianing
                     protein"
                     /calculated_mol_wt=24828
     Region          18..87
                     /region_name="Fn3-like"
                     /note="Fibronectin type III-like domain; pfam14310"
                     /db_xref="CDD:433860"
     Region          111..227
                     /region_name="CBM6_xylanase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); many are
                     appended to glycoside hydrolase (GH) family 11 and GH43
                     xylanase domains; cd04084"
                     /db_xref="CDD:271150"
     Site            order(126,136..137,195,222)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:271150"
ORIGIN      
        1 mtvtlvvkne ghlpgdevvq lyvkadssrv irplktlkgf rrihlqpnas etvsfelkag
       61 dlafwdvtrd rycvesgsyt lmvgpssgqv aetavlqiag etipprslle pvravnyddy
      121 qdvfidecre ggesirmagd sgwiafhdvs fdeaftafea rvsghikgge vivrtgspdg
      181 peagsckvpp tggrqawttv kapltglagr hnvflaftge vqiswfrit
//
LOCUS       WP_235187294             657 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: restriction endonuclease fold toxin [Paenibacillus].
ACCESSION   WP_235187294
VERSION     WP_235187294.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus
  ORGANISM  Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae.
REFERENCE   1  (residues 1 to 657)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026983.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15647.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Paenibacillus"
                     /db_xref="taxon:44249"
     Protein         1..657
                     /product="restriction endonuclease fold toxin"
                     /calculated_mol_wt=73816
     Region          29..234
                     /region_name="PrsW-protease"
                     /note="PrsW family intramembrane metalloprotease; cl23838"
                     /db_xref="CDD:474075"
     Region          <490..>581
                     /region_name="PRK10819"
                     /note="transport protein TonB; Provisional"
                     /db_xref="CDD:236768"
     Region          549..642
                     /region_name="Tox-REase-3"
                     /note="Restriction endonuclease fold toxin 3; pfam15647"
                     /db_xref="CDD:373988"
ORIGIN      
        1 miakvyhlft wlsllvlvis lilieesrtm lvqylwsfyv lvqfwllcrs ktlawkqvsl
       61 fvlsgvllvi pltnwtmqgl hlifggrttd twsfaimtpv ieevyklmpl alflcfsrka
      121 tslslsdyvl lgaapgigfq fmeelsrrlv qnnygvtwlg gktlhweffd lfpgyfeesf
      181 lptmmnvthp vqsamtalgi giairyskql trwvyvfpvl lllwtilnha awngqnrlpd
      241 wllafhdwtg egyrtegffl lllaaglfid yldlhrirer lpvlkgetli npftelwqmt
      301 talftdrkrl gyligfyrdr relgfsllyg ndeaagqrdq vqenvrryaa vlgaigliiv
      361 aagifsnmgi palasesscf aclfdslqnw wdglngweqa aiilgafals ilfvsfwpal
      421 giamtgagia gggheiagyi rdpkkllspq naaaavlavv lsripfgkgl swlsrklgpr
      481 arkwldnlae kvgskprqep dapsggsrdh ppdherppek kpepnkpdde kpdeagntpq
      541 dvprysgglq kvnkpdaaad alaerlgges rmkfdsdpig refdaisdey iaqtkpalqq
      601 vnkkvrdqmk atfeaaeqtg rkvyyhfege paqsvidklh eysqrygiev hidtdpl
//
LOCUS       WP_235187350             296 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme, partial [Paenibacillus sp. FSL R5-808].
ACCESSION   WP_235187350
VERSION     WP_235187350.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL R5-808
  ORGANISM  Paenibacillus sp. FSL R5-808
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 296)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 296)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Paenibacillus sp. FSL R5-808"
                     /db_xref="taxon:1227076"
     Protein         1..>296
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          32..>294
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(103..104,107,170,199,202,221,224)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:99738"
     Site            224
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99738"
ORIGIN      
        1 msinkgpsgl esqvngnslp gkkgregdel rfetkllhfg geidratgas svpiyqastf
       61 hhedifnppl hdysrsgnpt rqaledyial leggargfay asgmaaisss fmllsagdhm
      121 ivtedvyggt yrlltsilsr mgiestfvdm tdldqvkaal kpntkavyme tpsnptlkit
      181 nigavtdwak ehglltlldn tfmtpfyqrp iefgvdivih satkflgghs dvlaglavar
      241 tqelgdqlkq lqnglgtvlg vqdswllmrg mktlstrmah seqsaaklaa wlqgrs
//
LOCUS       WP_235187393             423 aa            linear   BCT 02-MAR-2025
DEFINITION  secretin N-terminal domain-containing protein [Vibrio
            nigripulchritudo].
ACCESSION   WP_235187393
VERSION     WP_235187393.1
KEYWORDS    RefSeq.
SOURCE      Vibrio nigripulchritudo
  ORGANISM  Vibrio nigripulchritudo
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 423)
  AUTHORS   Yin,M., Yan,Z. and Li,X.
  TITLE     Structural insight into the assembly of the type II secretion
            system pilotin-secretin complex from enterotoxigenic Escherichia
            coli
  JOURNAL   Nat Microbiol 3 (5), 581-587 (2018)
   PUBMED   29632366
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015891.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03958.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Vibrio nigripulchritudo"
                     /db_xref="taxon:28173"
     Protein         1..423
                     /product="secretin N-terminal domain-containing protein"
                     /calculated_mol_wt=45903
     Region          30..423
                     /region_name="IV"
                     /note="phage assembly protein; PHA00019"
                     /db_xref="CDD:222772"
ORIGIN      
        1 mnktfrltqs palsakgfcs gfstsskvgl llalsvlitp vqaeesisfe ssntpigdfv
       61 swfsghtgqt ivmakgvtgs vsfsatdlrp neyaaffesv lrshgyqlnq rngfytitid
      121 eeevtelkps kvklyrlnhv rntklvqlmg smlaatqeqa vggqeiknhd veilpttnai
      181 ivtgtdgqie kidaiiagid kpqrqvfiea vitetevgss eeigvnlsvq lgnagfvsnn
      241 mgydkltdnl lffeggdfsa fvkavsnstn tkllsrpnll imdreegyit vgqnvpflvs
      301 revtdggkei qaierkdvgv slrvrphvmg eevileieqq sdsvsnsava adiitntrtl
      361 ktvakvksrq titlgglist eqrisesgvp vlmhvpllga afrwdkdeev kkelsvvikt
      421 tvl
//
LOCUS       WP_235187402             289 aa            linear   BCT 02-MAR-2025
DEFINITION  type II secretion system F family protein [Vibrio
            nigripulchritudo].
ACCESSION   WP_235187402
VERSION     WP_235187402.1
KEYWORDS    RefSeq.
SOURCE      Vibrio nigripulchritudo
  ORGANISM  Vibrio nigripulchritudo
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 289)
  AUTHORS   Peabody,C.R., Chung,Y.J., Yen,M.R., Vidal-Ingigliardi,D.,
            Pugsley,A.P. and Saier,M.H.
  TITLE     Type II protein secretion and its relationship to bacterial type IV
            pili and archaeal flagella
  JOURNAL   Microbiology (Reading) 149 (Pt 11), 3051-3072 (2003)
   PUBMED   14600218
REFERENCE   2  (residues 1 to 289)
  AUTHORS   Py,B., Loiseau,L. and Barras,F.
  TITLE     An inner membrane platform in the type II secretion machinery of
            Gram-negative bacteria
  JOURNAL   EMBO Rep 2 (3), 244-248 (2001)
   PUBMED   11266368
REFERENCE   3  (residues 1 to 289)
  AUTHORS   Stathopoulos,C., Hendrixson,D.R., Thanassi,D.G., Hultgren,S.J., St
            Geme,J.W. 3rd and Curtiss,R. 3rd.
  TITLE     Secretion of virulence determinants by the general secretory
            pathway in gram-negative pathogens: an evolving story
  JOURNAL   Microbes Infect 2 (9), 1061-1072 (2000)
   PUBMED   10967286
REFERENCE   4  (residues 1 to 289)
  AUTHORS   Salmond,G.P. and Reeves,P.J.
  TITLE     Membrane traffic wardens and protein secretion in gram-negative
            bacteria
  JOURNAL   Trends Biochem Sci 18 (1), 7-12 (1993)
   PUBMED   8438237
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11449670
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Vibrio nigripulchritudo"
                     /db_xref="taxon:28173"
     Protein         1..289
                     /product="type II secretion system F family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /calculated_mol_wt=32567
     Region          108..286
                     /region_name="TadC"
                     /note="Flp pilus assembly protein TadC [Extracellular
                     structures]; COG2064"
                     /db_xref="CDD:441667"
ORIGIN      
        1 mkiflslall acgllfgifa lyrrfkkanr lkqfsidvre teqkptlfvq lldqvasmfs
       61 krdsdiegkf yaagfyhfky anlyiptkft lligcsiliy lvgeslnwde lnsfifigiw
      121 vvfcliapda yldskrkglq rklsgqlpyl ldllavcvqt gmtieaamty lskemsgfdk
      181 dlaqllkntn drsrlvgldr aldelyervp tnemrsftmt lkqslhygts iygvlttlaa
      241 dirdvtmlsm eekigklaak msiplilfim mpvviliaap gimrilana
//
LOCUS       WP_235187458             220 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: NAD-dependent epimerase/dehydratase family protein
            [Paenibacillus].
ACCESSION   WP_235187458
VERSION     WP_235187458.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus
  ORGANISM  Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae.
REFERENCE   1  (residues 1 to 220)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Paenibacillus"
                     /db_xref="taxon:44249"
     Protein         1..220
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=23808
     Region          <1..213
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 metfisalrg sgkpflhtsg ssvvgddarg davseqiyde etpftpmdtr edrvainnqv
       61 rragiddavr svvivpsmiy gealglptds dqlpqiirks revgagvhvg kgvnrwsnvh
      121 irdlaqlyll altkapsasy ffaengeesy gdiaiavska lgfggktvsw saedaiaelg
      181 dwarfaiasn srvravharn llgwkpaees lldwieihlk
//
LOCUS       WP_235187466             285 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase [Vibrio nigripulchritudo].
ACCESSION   WP_235187466
VERSION     WP_235187466.1
KEYWORDS    RefSeq.
SOURCE      Vibrio nigripulchritudo
  ORGANISM  Vibrio nigripulchritudo
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 285)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 285)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Vibrio nigripulchritudo"
                     /db_xref="taxon:28173"
     Protein         1..285
                     /product="phosphotransferase"
                     /calculated_mol_wt=32898
     Region          30..280
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31,33..36,38,49,51,81,94..96,98,99,176,178,180..181,
                     183,192..193,196,212)
                     /site_type="active"
                     /db_xref="CDD:270700"
     Site            order(31,36,38,49,51,81,94..96,98,99,180,183,192..193)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270700"
     Site            order(33..35,176,178,181,196,212)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:270700"
     Site            order(65,68..69,72..73,83..86,168)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:270700"
ORIGIN      
        1 mgwqealqld nslnslsdyf dsppeqmell sgglsnrcwk isqdechyvw rpvskstlsf
       61 gisranefhl lnalnnysfs pdpvllnesg llvkwiegep vqdqisqdel lhilasvhkv
      121 kindkpiqkl lfsekvdhyw mqikpefkte slerlykkhr eplylaetdr tlchfdlgay
      181 nlirtdqglg vidweysaig dprmdlamti evsglnpeva vamycqfrgi gfdameewqe
      241 gvkgwlpkir llgllwyllg hqlwgtslyk eraeelqdql mkmrs
//
LOCUS       WP_235187497             537 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ATP-binding protein [Paenibacillus].
ACCESSION   WP_235187497
VERSION     WP_235187497.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus
  ORGANISM  Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae.
REFERENCE   1  (residues 1 to 537)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 537)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 537)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 537)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Paenibacillus"
                     /db_xref="taxon:44249"
     Protein         1..537
                     /product="ATP-binding protein"
                     /calculated_mol_wt=60227
     Region          72..>235
                     /region_name="PRK11388"
                     /note="DNA-binding transcriptional regulator DhaR;
                     Provisional"
                     /db_xref="CDD:183114"
     Region          <179..537
                     /region_name="KinA"
                     /note="Sporulation sensor histidine kinase A (Stage II
                     sporulation protein SpoIIF/SpoIIJ) [Cell cycle control,
                     cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG5805"
                     /db_xref="CDD:444507"
ORIGIN      
        1 mildkplgei tdqeiirqak qqcidkgmnp elvpththrl ndealavrra kyseyieviq
       61 afvnkflssg sgnpvlitit dnegfildfa gdptiietar ylgivegsgy caedgpssid
      121 lclnykrpft ligedhfhqi lhgmacysap fhgesgkeii gtislmtnke fvhphlhall
      181 ctmadslere mvtrkqntql qtlnqvllgt nhygviitda qgqilemneh clsllcpdrs
      241 drdrsnyvsr svfgikpige yyerviqrqe vcigeelsle isgnvnhyil dvqpaydrkg
      301 qimrvvgslr ditemkrtee vlrnteklvf agqvavsiah evrnplttvk gmlqlankda
      361 rlrhydlims eleranlmvg efmilgkpqa avlkqedcge ileevlhlfa iqaelsgiem
      421 tqcfvqnavi lcdrnqikqv flnilkname alpyggnihi rldvqegyqr viftdngsgm
      481 teevlqrige pfhttkpdgn glgimivhri meshhgrivi rseeergtsv eiglplp
//
LOCUS       WP_235187509             452 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF2515 family protein [Paenibacillus].
ACCESSION   WP_235187509
VERSION     WP_235187509.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus
  ORGANISM  Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10720.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Paenibacillus"
                     /db_xref="taxon:44249"
     Protein         1..452
                     /product="DUF2515 family protein"
                     /calculated_mol_wt=52312
     Region          93..430
                     /region_name="DUF2515"
                     /note="Protein of unknown function (DUF2515); pfam10720"
                     /db_xref="CDD:371209"
ORIGIN      
        1 mwawtaaiph alaeswsgtl aswqislklt tnkhelrwdy aavrtirrkl kdilsshpyl
       61 qppgslmsst egyssirihn qlhnltqeeq elilliqeaa ananrsnvtr tqayydcyks
      121 ypelhwalla hmvsrnagwn msdlkgglms dltdsqfknh lyrflercna lifqdaypql
      181 llyihsrkkg aplfhllphf hisafmtpfw eqfwldrgss lltvaliine qnyiegrvar
      241 hpfylehvle qpffrihela rlnqivfplg qvsgpeadmm asqdppdttr plagmtipkf
      301 adlsirikag rtlyallfgy eeifhsvlaf aqstkhrgsr aeywpalftp alesamnnah
      361 esrnliqsew lpeggrlysp hieeiwqdes qepiprydwy qgrvmlrhir kpirpllpdm
      421 thahraalek tsivhdvser ihshenrkrp sr
//
LOCUS       WP_235187512            1081 aa            linear   BCT 02-MAR-2025
DEFINITION  VWA domain-containing protein [Vibrio nigripulchritudo].
ACCESSION   WP_235187512
VERSION     WP_235187512.1
KEYWORDS    RefSeq.
SOURCE      Vibrio nigripulchritudo
  ORGANISM  Vibrio nigripulchritudo
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024909.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13519.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Vibrio nigripulchritudo"
                     /db_xref="taxon:28173"
     Protein         1..1081
                     /product="VWA domain-containing protein"
                     /calculated_mol_wt=117054
     Region          1..>158
                     /region_name="gliding_CglD"
                     /note="adventurous gliding motility lipoprotein CglD;
                     NF033765"
                     /db_xref="CDD:468178"
     Region          <302..489
                     /region_name="YfbK"
                     /note="Secreted protein containing bacterial Ig-like
                     domain and vWFA domain [General function prediction only];
                     COG2304"
                     /db_xref="CDD:441879"
     Region          473..>636
                     /region_name="gliding_CglD"
                     /note="adventurous gliding motility lipoprotein CglD;
                     NF033765"
                     /db_xref="CDD:468178"
     Region          734..812
                     /region_name="FIX_vWA-like"
                     /note="Found in type sIX effector (FIX) domain of unknown
                     function co-occurring with von Willebrand factor type A
                     (vWA) domain or MSCRAMM family adhesin SdrC domain;
                     cd20742"
                     /db_xref="CDD:410940"
ORIGIN      
        1 mqrkilaiai ssvilsacgg gsgdtsdtnk tvsppdpvek vsaeiqskfg aipgkvdtdg
       61 delpddfeit llypfgkpdl sdtdgngvsd anedhdsdgl inliefehgt npldsdsdkd
      121 glsdqfeieq fgtdplivdt dkdglsdkee ydlgldpltv salenlvtst gipgelrvsl
      181 tgdaylakhv kifelglpnn lqppglvgkp yeihlddekv qsmfkahvsf pydesvdpnn
      241 lgiftfdevk elwvpadtse rqivvdeask vvslelehfs kyglfdkqaw esyysnipnv
      301 cepadsnnvr plelafvlds sgsmrwsdpd nirivgskhl vdrlkevdrg avidfdstaq
      361 llqsltdnka viksaldlid asggtdigdg vskaleefan arsasdwavv lltdgsgsyn
      421 halttelvqk nirvlgitmg sganqslird isdstygiyq hvntadelie vferfstisg
      481 dtladtdqdg ltdcqeiqgi rvanstdtff tdpnnpdtdg dglldgievg ervsltenas
      541 lsptqpaall gsrkgyqtls ngtfegsyhk misnptipdt dgdglndare ldgeadpliv
      601 dsdgdgvldg aegffetsfv nvdtdsdvie dsleiahqhy gllsssyayi leldptnerl
      661 aqagftlsne kiakslgyrt elistskfpf vdfntyqnti vipngepstw niaqdyqlsl
      721 gsllfqqgll tkleftkgli vglevegddf mapnstaalm gglvsgflvv gdvrdalina
      781 sqadfgeall nlvamvpgkg dainvakvpa fvhsfirrfp kkraavlsli akspflpddy
      841 kraalvaelg mvadvflsne eqdspasgir stasssnssl tasnllklls gtkpktlenl
      901 aqlvkngkvs tmkirseasq ygavngyfnn atingvkrar grlgefytey malnhlypns
      961 rtfesmnlsk vystsvpskk mpqgsvryid vaietadnrt igleskvgqi rnskfvrnqi
     1021 ekdceiinqp vngqdildei ewhfypsavs nsigfpaalt dmfdcpkfpn gkkikpvihl
     1081 p
//
LOCUS       WP_235187532             178 aa            linear   BCT 02-MAR-2025
DEFINITION  CsiV family protein [Methylobacter tundripaludum].
ACCESSION   WP_235187532
VERSION     WP_235187532.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter tundripaludum
  ORGANISM  Methylobacter tundripaludum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
REFERENCE   1  (residues 1 to 178)
  AUTHORS   Dorr,T., Lam,H., Alvarez,L., Cava,F., Davis,B.M. and Waldor,M.K.
  TITLE     A novel peptidoglycan binding protein crucial for PBP1A-mediated
            cell wall biogenesis in Vibrio cholerae
  JOURNAL   PLoS Genet 10 (6), e1004433 (2014)
   PUBMED   24945690
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022425.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10972.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Methylobacter tundripaludum"
                     /db_xref="taxon:173365"
     Protein         1..178
                     /product="CsiV family protein"
                     /calculated_mol_wt=19426
     Region          7..178
                     /region_name="CsiV"
                     /note="Peptidoglycan-binding protein, CsiV; pfam10972"
                     /db_xref="CDD:431567"
ORIGIN      
        1 mirimaygla amlglfssql laeggayqie liifsqampt tevfeqtasq ikwpsaltel
       61 saykkpdatt lddsyaalsk dstyrpilhv awvqsieggg ltapvhiqga ggkldgylql
      121 qhdqglqmtv dfelgshfdg gsgkaviyrl nekrfiklne lyyldhskfg vvvkiipl
//
LOCUS       WP_235187541             491 aa            linear   BCT 02-MAR-2025
DEFINITION  alkaline phosphatase family protein [Methylobacter tundripaludum].
ACCESSION   WP_235187541
VERSION     WP_235187541.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter tundripaludum
  ORGANISM  Methylobacter tundripaludum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
REFERENCE   1  (residues 1 to 491)
  AUTHORS   Wimalasekera,R., Pejchar,P., Holk,A., Martinec,J. and Scherer,G.F.
  TITLE     Plant phosphatidylcholine-hydrolyzing phospholipases C NPC3 and
            NPC4 with roles in root development and brassinolide signaling in
            Arabidopsis thaliana
  JOURNAL   Mol Plant 3 (3), 610-625 (2010)
   PUBMED   20507939
REFERENCE   2  (residues 1 to 491)
  AUTHORS   Saleh,M.T. and Belisle,J.T.
  TITLE     Secretion of an acid phosphatase (SapM) by Mycobacterium
            tuberculosis that is similar to eukaryotic acid phosphatases
  JOURNAL   J Bacteriol 182 (23), 6850-6853 (2000)
   PUBMED   11073936
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016101.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04185.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Methylobacter tundripaludum"
                     /db_xref="taxon:173365"
     Protein         1..491
                     /product="alkaline phosphatase family protein"
                     /GO_function="GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /calculated_mol_wt=54874
     Region          71..490
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
     Site            order(80,219,377,413..414)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293737"
     Site            order(80,219,377,414)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293737"
     Site            order(131..132,135,137,170..171,173,210,421,423,425,
                     449..452,454)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:293737"
ORIGIN      
        1 matprlklik hcynhaklfd frqsfdlfay titkqqreai mkinhiaall aalatllpaa
       61 artepvglnr iehivviyle nrsfdslfgl fpganglada qnaplqvdes grpyqtlptv
      121 mdvkhkpvil dkrfptdlan spfdiaryak pdekhpdlth rffihqmqid ggrndrfaql
      181 ssaggltmgh ydlsgtalwn yakeftladn ffqaafggsf lnhqwlicac tptfkdapan
      241 lhqwksdpat gkptgdpvlt edgyavntiq phfppfdpah qkdrlpaqyq ttigdrlsek
      301 niswawyagg wddaaagrkt gdkfdyhhqp fvyyanyapd sraraehlkd rsklfadlkg
      361 nfpqvaffkp tgnkdqhpgh ssileadrev kevvdairds aawpstaiii tydeyggfwd
      421 hvappeidrw gpgtripaii vspfakkgyv dhtvydttsi lklietrfgl apltdrdaka
      481 nglqgafefs q
//
LOCUS       WP_235187647              77 aa            linear   BCT 02-MAR-2025
DEFINITION  CBS domain-containing protein [Methylobacter tundripaludum].
ACCESSION   WP_235187647
VERSION     WP_235187647.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter tundripaludum
  ORGANISM  Methylobacter tundripaludum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
REFERENCE   1  (residues 1 to 77)
  AUTHORS   Scott,J.W., Hawley,S.A., Green,K.A., Anis,M., Stewart,G.,
            Scullion,G.A., Norman,D.G. and Hardie,D.G.
  TITLE     CBS domains form energy-sensing modules whose binding of adenosine
            ligands is disrupted by disease mutations
  JOURNAL   J Clin Invest 113 (2), 274-284 (2004)
   PUBMED   14722619
REFERENCE   2  (residues 1 to 77)
  AUTHORS   Kemp,B.E.
  TITLE     Bateman domains and adenosine derivatives form a binding contract
  JOURNAL   J Clin Invest 113 (2), 182-184 (2004)
   PUBMED   14722609
REFERENCE   3  (residues 1 to 77)
  AUTHORS   Janosik,M., Kery,V., Gaustadnes,M., Maclean,K.N. and Kraus,J.P.
  TITLE     Regulation of human cystathionine beta-synthase by
            S-adenosyl-L-methionine: evidence for two catalytically active
            conformations involving an autoinhibitory domain in the C-terminal
            region
  JOURNAL   Biochemistry 40 (35), 10625-10633 (2001)
   PUBMED   11524006
REFERENCE   4  (residues 1 to 77)
  AUTHORS   Zhang,R., Evans,G., Rotella,F.J., Westbrook,E.M., Beno,D.,
            Huberman,E., Joachimiak,A. and Collart,F.R.
  TITLE     Characteristics and crystal structure of bacterial
            inosine-5'-monophosphate dehydrogenase
  JOURNAL   Biochemistry 38 (15), 4691-4700 (1999)
   PUBMED   10200156
REFERENCE   5  (residues 1 to 77)
  AUTHORS   Ponting,C.P.
  TITLE     CBS domains in CIC chloride channels implicated in myotonia and
            nephrolithiasis (kidney stones)
  JOURNAL   J Mol Med (Berl) 75 (3), 160-163 (1997)
   PUBMED   9106071
REFERENCE   6  (residues 1 to 77)
  AUTHORS   Bateman,A.
  TITLE     The structure of a domain common to archaebacteria and the
            homocystinuria disease protein
  JOURNAL   Trends Biochem Sci 22 (1), 12-13 (1997)
   PUBMED   9020585
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012780.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00571.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Methylobacter tundripaludum"
                     /db_xref="taxon:173365"
     Protein         1..77
                     /product="CBS domain-containing protein"
                     /calculated_mol_wt=8434
     Region          <1..51
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
     Region          6..49
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
ORIGIN      
        1 mgpqlvsvqe kdgvfetirl mrtkgvrrip vvnqegglvg imsaddildl laeemtelak
       61 vaprererea ktksllt
//
LOCUS       WP_235187671             867 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Methylobacter
            tundripaludum].
ACCESSION   WP_235187671
VERSION     WP_235187671.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter tundripaludum
  ORGANISM  Methylobacter tundripaludum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
REFERENCE   1  (residues 1 to 867)
  AUTHORS   Coquille,S., Roux,C., Fitzpatrick,T.B. and Thore,S.
  TITLE     The last piece in the vitamin B1 biosynthesis puzzle: structural
            and functional insight into yeast
            4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate (HMP-P)
            synthase
  JOURNAL   J Biol Chem 287 (50), 42333-42343 (2012)
   PUBMED   23048037
REFERENCE   2  (residues 1 to 867)
  AUTHORS   Wightman,R. and Meacock,P.A.
  TITLE     The THI5 gene family of Saccharomyces cerevisiae: distribution of
            homologues among the hemiascomycetes and functional redundancy in
            the aerobic biosynthesis of thiamin from pyridoxine
  JOURNAL   Microbiology (Reading) 149 (Pt 6), 1447-1460 (2003)
   PUBMED   12777485
REFERENCE   3  (residues 1 to 867)
  AUTHORS   Rodriguez-Navarro,S., Llorente,B., Rodriguez-Manzaneque,M.T.,
            Ramne,A., Uber,G., Marchesan,D., Dujon,B., Herrero,E.,
            Sunnerhagen,P. and Perez-Ortin,J.E.
  TITLE     Functional analysis of yeast gene families involved in metabolism
            of vitamins B1 and B6
  JOURNAL   Yeast 19 (14), 1261-1276 (2002)
   PUBMED   12271461
REFERENCE   4  (residues 1 to 867)
  AUTHORS   Maundrell,K.
  TITLE     nmt1 of fission yeast. A highly transcribed gene completely
            repressed by thiamine
  JOURNAL   J Biol Chem 265 (19), 10857-10864 (1990)
   PUBMED   2358444
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020650.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09084.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Methylobacter tundripaludum"
                     /db_xref="taxon:173365"
     Protein         1..867
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=98523
     Region          15..224
                     /region_name="NMT1"
                     /note="NMT1/THI5 like; pfam09084"
                     /db_xref="CDD:430398"
     Region          359..866
                     /region_name="COG4251"
                     /note="Bacteriophytochrome (light-regulated signal
                     transduction histidine kinase) [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443393"
     Region          <613..863
                     /region_name="COG4191"
                     /note="Signal transduction histidine kinase regulating
                     C4-dicarboxylate transport system [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443345"
ORIGIN      
        1 msadpihlql rwhhqfqfag yyaalekgyy kdagldviih egtpekkpvq evlqghaqyg
       61 eanselller lrgaplvala aiyqhspsvl iarkdaeiss pdglvgkkim llnqtvdadf
      121 vamfnnegid idrlhivpss yeirdlidgk adafnsylsn epyllkqqgi efnvlnprny
      181 gvdfysdilf ttedelkqhp ervkafrqas legwyyamdh pqeiidllln kykvtksrdh
      241 lnfeadairp livpdvidlg hmnpwrwrhm aetfikagmv endkflqnfs ydpdpkadke
      301 kllkyiriav titlltgist ltllasyral krknkkasrn ekllrlahet agigyyaidl
      361 atglwesspl ldqifgidan fdrdipnwat lihpehrqrv ldhyqdvirn herfsmeyvi
      421 thpnddktrw viahgyieyd kadnpvqlvg tiqditerkq aeetitclne klkkkvhrqt
      481 neltasnlsl mrkieelrrs khqlmereak lnsifnasve giitidmfni iisanaavda
      541 ifgynpeeli gcsinkliqs spreticcsl lhaaqpvsqi qeidgihkng slvsldlsta
      601 eysidnehyf thivrdvssr kqreqkdkkh lnelahvtrl glmgemasgi ahevnqplsa
      661 issytqvsln linieppdla rlteildktq qqalragrii hrmrefvksh aqkrsvadvn
      721 hlihecaglc vgelkqnnik ltfelknnlp pvyvdqiqie qviinlirns vdalknlpek
      781 qqrqltissr ltlnndiqvk vkdngagide dqkqkiltpf yttkadgmgm glsitrslve
      841 ahegtlnfns kagkgttfyf tlpteki
//
LOCUS       WP_235187714             240 aa            linear   BCT 02-MAR-2025
DEFINITION  P-loop NTPase fold protein [Vibrio cholerae].
ACCESSION   WP_235187714
VERSION     WP_235187714.1
KEYWORDS    RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 240)
  AUTHORS   Aravind,L., Iyer,L.M., Leipe,D.D. and Koonin,E.V.
  TITLE     A novel family of P-loop NTPases with an unusual phyletic
            distribution and transmembrane segments inserted within the NTPase
            domain
  JOURNAL   Genome Biol 5 (5), R30 (2004)
   PUBMED   15128444
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019313.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07693.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Vibrio cholerae"
                     /db_xref="taxon:666"
     Protein         1..240
                     /product="P-loop NTPase fold protein"
                     /calculated_mol_wt=27043
     Region          22..>160
                     /region_name="KAP_NTPase"
                     /note="KAP family P-loop domain; cl46386"
                     /db_xref="CDD:480726"
ORIGIN      
        1 mvkqvnldws qgikigneff pedklgraky atfltkllas qgfdktrnpd eqkrnyvlnl
       61 naewgsgkty flkrwsedlk ehypvvyida wkkdysddpl mtvvssiieq lrkqagkdkd
      121 akefrvprkl igllkaaapg igrglfkryv gidpveimna dddnenlgsi kgengkdlvd
      181 engkpidmsf aaseavkyli dehdaksaai eslktsvfew vtavtgikkr nyplsfllmn
//
LOCUS       WP_235187775             324 aa            linear   BCT 02-MAR-2025
DEFINITION  DMT family transporter, partial [Micrococcus luteus].
ACCESSION   WP_235187775
VERSION     WP_235187775.1
KEYWORDS    RefSeq.
SOURCE      Micrococcus luteus
  ORGANISM  Micrococcus luteus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Micrococcus.
REFERENCE   1  (residues 1 to 324)
  AUTHORS   Jack,D.L., Yang,N.M. and Saier,M.H. Jr.
  TITLE     The drug/metabolite transporter superfamily
  JOURNAL   Eur J Biochem 268 (13), 3620-3639 (2001)
   PUBMED   11432728
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10007109
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Micrococcus luteus"
                     /db_xref="taxon:1270"
     Protein         <1..324
                     /product="DMT family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          26..152
                     /region_name="ydcZ"
                     /note="Uncharacterized membrane protein YdcZ, DUF606
                     family [Function unknown]; COG3238"
                     /db_xref="CDD:442470"
     Region          194..>289
                     /region_name="ydcZ"
                     /note="Uncharacterized membrane protein YdcZ, DUF606
                     family [Function unknown]; COG3238"
                     /db_xref="CDD:442470"
ORIGIN      
        1 advaarpdap spratallfa lavaagsvmp lqgrinsrla hltgdpvlaa lcsfaaglvv
       61 mvlvsvltpr grrglarirp alaagsvrpw yavagviggl lvltqsatig plgvavftva
      121 vvtgqvvggm vvdrlglspa gvqrltprrl tgaalalaav alvvwpklge agggpgwall
      181 allpllagla tagqqvfnar qataygtaip atlvnftagv lflgivwggi vlasghgmpa
      241 lphdwrlylg gplgcvfigv gamvvprlgv faatlglvsg nllgslmvdl vaptdgstvt
      301 tttvlgtlga laavtlaswp arrr
//
LOCUS       WP_235187853             320 aa            linear   BCT 02-MAR-2025
DEFINITION  lactate/malate family dehydrogenase [Metamycoplasma hyosynoviae].
ACCESSION   WP_235187853
VERSION     WP_235187853.1
KEYWORDS    RefSeq.
SOURCE      Metamycoplasma hyosynoviae (Mycoplasma hyosynoviae)
  ORGANISM  Metamycoplasma hyosynoviae
            Bacteria; Bacillati; Mycoplasmatota; Mycoplasmoidales;
            Metamycoplasmataceae; Metamycoplasma.
REFERENCE   1  (residues 1 to 320)
  AUTHORS   Madern,D.
  TITLE     Molecular evolution within the L-malate and L-lactate dehydrogenase
            super-family
  JOURNAL   J Mol Evol 54 (6), 825-840 (2002)
   PUBMED   12029364
REFERENCE   2  (residues 1 to 320)
  AUTHORS   Chapman,A.D., Cortes,A., Dafforn,T.R., Clarke,A.R. and Brady,R.L.
  TITLE     Structural basis of substrate specificity in malate dehydrogenases:
            crystal structure of a ternary complex of porcine cytoplasmic
            malate dehydrogenase, alpha-ketomalonate and tetrahydoNAD
  JOURNAL   J Mol Biol 285 (2), 703-712 (1999)
   PUBMED   10075524
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012286.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00056.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Metamycoplasma hyosynoviae"
                     /db_xref="taxon:29559"
     Protein         1..320
                     /product="lactate/malate family dehydrogenase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=35132
     Region          2..307
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(9..11,32..33,76..77,99,119..121,144,148,176,233)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:133419"
     Site            order(13,17,37,41,43..44,46..48,151..152,154..155,161,235,
                     239)
                     /site_type="other"
                     /note="LDH/MDH dimer interface [polypeptide binding]"
                     /db_xref="CDD:133419"
     Site            order(121,152,176)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:133419"
ORIGIN      
        1 mkigivgvga vgssylyaal nkgveanyil idafekfaea qakdlndaac smancgstfe
       61 agkyadlada qivvitasvk pkegklqdrl ellkdnalli keiaenikks gfkgitiias
      121 npvdimasvy qqvtkfeprk vissgtilet armkkflsqk lkvkassitg fvigehgarc
      181 iipflkmrig lgslkdwlan gtvtkewldd lgkkvkdeaf eiisgkgitn fgigenlaei
      241 tlaiendrqs vyslgvqlsk eyknhgiyfg lpvilgkdgy rhlpkirlee deqklfddys
      301 reiketviei lnnlkikhnl
//
LOCUS       WP_235187876             201 aa            linear   BCT 02-MAR-2025
DEFINITION  collagen-like triple helix repeat-containing protein [Ralstonia
            pseudosolanacearum].
ACCESSION   WP_235187876
VERSION     WP_235187876.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia pseudosolanacearum
  ORGANISM  Ralstonia pseudosolanacearum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Ralstonia; Ralstonia
            solanacearum species complex.
REFERENCE   1  (residues 1 to 201)
  AUTHORS   McElroy,K., Mouton,L., Du Pasquier,L., Qi,W. and Ebert,D.
  TITLE     Characterisation of a large family of polymorphic collagen-like
            proteins in the endospore-forming bacterium Pasteuria ramosa
  JOURNAL   Res Microbiol 162 (7), 701-714 (2011)
   PUBMED   21726633
REFERENCE   2  (residues 1 to 201)
  AUTHORS   Whatmore,A.M.
  TITLE     Streptococcus pyogenes sclB encodes a putative hypervariable
            surface protein with a collagen-like repetitive structure
  JOURNAL   Microbiology (Reading) 147 (Pt 2), 419-429 (2001)
   PUBMED   11158359
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027314.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15984.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Ralstonia pseudosolanacearum"
                     /db_xref="taxon:1310165"
     Protein         1..201
                     /product="collagen-like triple helix repeat-containing
                     protein"
                     /calculated_mol_wt=18157
     Region          <46..132
                     /region_name="Collagen_mid"
                     /note="Bacterial collagen, middle region; pfam15984"
                     /db_xref="CDD:435053"
ORIGIN      
        1 mgtslggsgs qstlsltapd sptwsndsgt tdsssssssa agsttpveqv ktvavtailp
       61 lastltsatq tlgattglga pvssvlttlg salgseggtl tqagkgnalt stlgstvsal
      121 gtltgslaav vtpaasssgg sapggalgna lapvitavgs ltaslsgagt gsplsalgsa
      181 gttlgglvgg glsgvvpdtr h
//
LOCUS       WP_235187898             648 aa            linear   BCT 02-MAR-2025
DEFINITION  Mu transposase C-terminal domain-containing protein [Ralstonia
            pseudosolanacearum].
ACCESSION   WP_235187898
VERSION     WP_235187898.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia pseudosolanacearum
  ORGANISM  Ralstonia pseudosolanacearum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Ralstonia; Ralstonia
            solanacearum species complex.
REFERENCE   1  (residues 1 to 648)
  AUTHORS   Rice,P. and Mizuuchi,K.
  TITLE     Structure of the bacteriophage Mu transposase core: a common
            structural motif for DNA transposition and retroviral integration
  JOURNAL   Cell 82 (2), 209-220 (1995)
   PUBMED   7628012
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020859.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09299.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Ralstonia pseudosolanacearum"
                     /db_xref="taxon:1310165"
     Protein         1..648
                     /product="Mu transposase C-terminal domain-containing
                     protein"
                     /calculated_mol_wt=72737
     Region          97..436
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
     Region          467..530
                     /region_name="Mu-transpos_C"
                     /note="Mu transposase, C-terminal; pfam09299"
                     /db_xref="CDD:430512"
ORIGIN      
        1 msdekalllg stghamerqk ldltpdafva ragtiyrlve vldfdtvvgv dvgtgrtqal
       61 rigelkpvss addalqvvaa rdmeeiaddd wriaetryaa ikplldksvg ragvadraaq
      121 vgvdtatlyr wlkryqslgv vsaliprqrg wrtgesrisa eteavitevl rnkylteqrs
      181 spqktirevl rlceergiqp phpttvrnri aalserhtlh argfkerakn kflpaagrfp
      241 nadyplavvq idhtpadiil vddihrkpig rpwitlaidv hsrmvtgyyl afdppsetsv
      301 amcvahsvlp kdewlalhgv darwdvwgmm ttihtdngpd frsdnfrhac lmhginlefr
      361 pvkqpryggh ierllgtlls eihdlpgttf ssvkvregyd sdkhaaltks efetwlvtli
      421 cklyhqrlhk gigmsparkw eigmfgnaei vgrglpprpt drlsllldfm psyrrtvqty
      481 gvdieglryy advlrswina tdpdtpsakr kfvfrrdprd isvvwfrdpd lgqyfripfa
      541 nqalppmsaw eyeqakarak aegvqsvdep qilraltemr sqvdeakekt rrarrqsqrr
      601 rehekgispa apvaanaana ipvtmmrpld pagiglvdgd idafddia
//
LOCUS       WP_235187928             157 aa            linear   BCT 02-MAR-2025
DEFINITION  dUTP diphosphatase [Metamycoplasma hyosynoviae].
ACCESSION   WP_235187928
VERSION     WP_235187928.1
KEYWORDS    RefSeq.
SOURCE      Metamycoplasma hyosynoviae (Mycoplasma hyosynoviae)
  ORGANISM  Metamycoplasma hyosynoviae
            Bacteria; Bacillati; Mycoplasmatota; Mycoplasmoidales;
            Metamycoplasmataceae; Metamycoplasma.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Moroz,O.V., Harkiolaki,M., Galperin,M.Y., Vagin,A.A.,
            Gonzalez-Pacanowska,D. and Wilson,K.S.
  TITLE     The crystal structure of a complex of Campylobacter jejuni dUTPase
            with substrate analogue sheds light on the mechanism and suggests
            the 'basic module' for dimeric d(C/U)TPases
  JOURNAL   J Mol Biol 342 (5), 1583-1597 (2004)
   PUBMED   15364583
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020341.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08761.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Metamycoplasma hyosynoviae"
                     /db_xref="taxon:29559"
     Protein         1..157
                     /product="dUTP diphosphatase"
                     /EC_number="3.6.1.23"
                     /calculated_mol_wt=18018
     Region          2..157
                     /region_name="NTP-PPase"
                     /note="Nucleoside Triphosphate Pyrophosphohydrolase (EC
                     3.6.1.8) MazG-like domain superfamily; cl16941"
                     /db_xref="CDD:473051"
     Site            order(13..14,29,31..32,34..35,38,41..42,47..53,71)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:212134"
ORIGIN      
        1 mifetqvsld etllkkvidp nekyldtkkv iallvelgef anevksfkyw kkhkeidnek
       61 mqeefadgvh fltslalvyk ldseikiiqk sqdfslqlay vyktfakllk kvtvsslkva
      121 ygaylglgki vgiteeslce ayfkknkinf kriadny
//
LOCUS       WP_235188031             309 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4123 domain-containing protein [Ralstonia pseudosolanacearum].
ACCESSION   WP_235188031
VERSION     WP_235188031.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia pseudosolanacearum
  ORGANISM  Ralstonia pseudosolanacearum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Ralstonia; Ralstonia
            solanacearum species complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024894.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13503.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Ralstonia pseudosolanacearum"
                     /db_xref="taxon:1310165"
     Protein         1..309
                     /product="DUF4123 domain-containing protein"
                     /calculated_mol_wt=35035
     Region          23..154
                     /region_name="DUF4123"
                     /note="Domain of unknown function (DUF4123); pfam13503"
                     /db_xref="CDD:433262"
ORIGIN      
        1 mpldslhrtl geqlqaddne hgyllldpml replearell asgcdifrip vdrpqlhedq
       61 wpklvklrpa avemllasis lamseqssae legeegfvig gwlrssaepr alvrhlqslm
      121 lpseprvgrr ylrladrrvf ewiwpvlspl qrqqwlgpin rwwalnrrne lvlhamtetv
      181 pgephhdpel lttaqwtrlh dcelaqqilr gwssfadplp adyvpqaeha lrsvrslgva
      241 epadivlmsa yqlqihprlc ehprvvelvr taqnsdvplq dalagmpdpe gwdrirhelt
      301 igsppnpla
//
LOCUS       WP_235188039              40 aa            linear   BCT 02-MAR-2025
DEFINITION  recombinase family protein [Ralstonia pseudosolanacearum].
ACCESSION   WP_235188039
VERSION     WP_235188039.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia pseudosolanacearum
  ORGANISM  Ralstonia pseudosolanacearum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Ralstonia; Ralstonia
            solanacearum species complex.
REFERENCE   1  (residues 1 to 40)
  AUTHORS   Yang,W. and Steitz,T.A.
  TITLE     Crystal structure of the site-specific recombinase gamma delta
            resolvase complexed with a 34 bp cleavage site
  JOURNAL   Cell 82 (2), 193-207 (1995)
   PUBMED   7628011
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012464.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00239.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..40
                     /organism="Ralstonia pseudosolanacearum"
                     /db_xref="taxon:1310165"
     Protein         1..40
                     /product="recombinase family protein"
                     /GO_function="GO:0000150 - DNA strand exchange activity
                     [Evidence IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /calculated_mol_wt=4499
     Region          <1..>40
                     /region_name="SpoIVCA"
                     /note="Site-specific DNA recombinase SpoIVCA/DNA invertase
                     PinE [Replication, recombination and repair]; COG1961"
                     /db_xref="CDD:441564"
ORIGIN      
        1 meekrarfrs ftesldtslp agrmllhmvg afaefeleli
//
LOCUS       WP_235188056             374 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: phage portal protein family protein [Vibrio].
ACCESSION   WP_235188056
VERSION     WP_235188056.1
KEYWORDS    RefSeq.
SOURCE      Vibrio
  ORGANISM  Vibrio
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06074.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Vibrio"
                     /db_xref="taxon:662"
     Protein         1..374
                     /product="phage portal protein family protein"
                     /calculated_mol_wt=41407
     Region          50..>341
                     /region_name="DUF935"
                     /note="Protein of unknown function (DUF935); cl19863"
                     /db_xref="CDD:473237"
ORIGIN      
        1 miknltlssl iarlptdviv nhyplptelg naryqssnyy fgairamlld eevasdiemr
       61 hatamtvpyv iegsasdiaf ynevtadfdl emlmeqmlsa tefgfmpvel iwdkdgsllv
      121 ltnseqkrpe dfrllkdgtl vysavdytar tpvtgkvipv lrnatterpy getilesvwp
      181 iwqskwiswa nierlgekya iptaialaen angeadlqai anslapvmng davalsgvke
      241 ivaldangkv dellrtieyi dnkiskritg qtltggnqky gsrslgevhe raamrvskrd
      301 armvhktlnd tlfkwiflan gregnikirv deeaykamle salangsgve pvqgfnqrps
      361 lefsdvpgkh lcll
//
LOCUS       WP_235188075             246 aa            linear   BCT 02-MAR-2025
DEFINITION  polymorphic toxin type 50 domain-containing protein, partial
            [Bacillus thuringiensis].
ACCESSION   WP_235188075
VERSION     WP_235188075.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 246)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026880.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15542.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         <1..246
                     /product="polymorphic toxin type 50 domain-containing
                     protein"
     Region          151..243
                     /region_name="Ntox50"
                     /note="Bacterial toxin 50; pfam15542"
                     /db_xref="CDD:406083"
ORIGIN      
        1 effqgagdaa lenffglqph endklesktt yqagrlagnv isiagsivem feaisliggs
       61 nfltivaevg tgglaspivi pldiaataig aslfvhggfv wnksiqntkd tiqkiqssgg
      121 gkgasnrips ygkdsvpkgp yrevngypik vkagaqekhi pdtpnykqel angknksify
      181 gdnkiaqell dkfagkgell kngrervdfg epigkyydrn tgeyhettkg lihygldgah
      241 ivpsrp
//
LOCUS       WP_235188135             426 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class III-fold pyridoxal phosphate-dependent
            enzyme [Micrococcus luteus].
ACCESSION   WP_235188135
VERSION     WP_235188135.1
KEYWORDS    RefSeq.
SOURCE      Micrococcus luteus
  ORGANISM  Micrococcus luteus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Micrococcus.
REFERENCE   1  (residues 1 to 426)
  AUTHORS   Shen,B.W., Hennig,M., Hohenester,E., Jansonius,J.N. and Schirmer,T.
  TITLE     Crystal structure of human recombinant ornithine aminotransferase
  JOURNAL   J Mol Biol 277 (1), 81-102 (1998)
   PUBMED   9514741
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012428.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00202.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Micrococcus luteus"
                     /db_xref="taxon:1270"
     Protein         1..426
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /calculated_mol_wt=46015
     Region          12..419
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(130..132,158..159,161,231,264,266..267,293)
                     /site_type="active"
                     /note="inhibitor-cofactor binding pocket [active]"
                     /db_xref="CDD:99735"
     Site            order(131..132,158..159,231,264,267,293)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:99735"
     Site            293
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99735"
ORIGIN      
        1 msehqqhvgr rdprisdeai ergrraheld rahvfhswsa qrdlnpmtil daegswvwdg
       61 egrpmvdfsg qlvftnvghr hpkivaaire qaetlatvap qhvndarsea arlitewlpe
      121 sinhvfftna gaeandhavr marlhtgrhk vlsaylsyhg atrltanltg slrrvgsdsa
      181 sdgvvhfqpa ytyrsafgse ndeqeaeral ahlrdviele gpstvaavvl eavpgtagif
      241 mpppgymagv kelcrehgil liidevmvgf grvgewfghq ltgvtpdivt fakgvnsgyv
      301 plggvamsdd vyesfattpy pggltysghp lacaaavaai tameeegmva nakrigeeii
      361 gprlaeiaaa hpsvgdvrga gafwavelvk drqtrerlap lgqvapvmgr mmaeakdrgs
      421 rrptcc
//
LOCUS       WP_235188221             184 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: TMEM165/GDT1 family protein [unclassified
            Sphingomonas].
ACCESSION   WP_235188221
VERSION     WP_235188221.1
KEYWORDS    RefSeq.
SOURCE      unclassified Sphingomonas
  ORGANISM  unclassified Sphingomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 184)
  AUTHORS   Stribny,J., Thines,L., Deschamps,A., Goffin,P. and Morsomme,P.
  TITLE     The human Golgi protein TMEM165 transports calcium and manganese in
            yeast and bacterial cells
  JOURNAL   J Biol Chem 295 (12), 3865-3874 (2020)
   PUBMED   32047108
REFERENCE   2  (residues 1 to 184)
  AUTHORS   Colinet,A.S., Sengottaiyan,P., Deschamps,A., Colsoul,M.L.,
            Thines,L., Demaegd,D., Duchene,M.C., Foulquier,F., Hols,P. and
            Morsomme,P.
  TITLE     Yeast Gdt1 is a Golgi-localized calcium transporter required for
            stress-induced calcium signaling and protein glycosylation
  JOURNAL   Sci Rep 6, 24282 (2016)
   PUBMED   27075443
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 184)
  AUTHORS   Reinhardt,T.A., Lippolis,J.D. and Sacco,R.E.
  TITLE     The Ca(2+)/H(+) antiporter TMEM165 expression, localization in the
            developing, lactating and involuting mammary gland parallels the
            secretory pathway Ca(2+) ATPase (SPCA1)
  JOURNAL   Biochem Biophys Res Commun 445 (2), 417-421 (2014)
   PUBMED   24530912
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013346.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01169.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="unclassified Sphingomonas"
                     /db_xref="taxon:196159"
     Protein         1..184
                     /product="TMEM165/GDT1 family protein"
                     /calculated_mol_wt=18664
     Region          13..183
                     /region_name="Gdt1"
                     /note="Putative Ca2+/H+ antiporter, TMEM165/GDT1 family
                     [General function prediction only]; COG2119"
                     /db_xref="CDD:441722"
ORIGIN      
        1 maalvaaala qvgdrtawla ailsdryrkp rlvilaaala lllagslava ggiavapllt
       61 pnarqlmlal alilqgggal lpvkapdplr gwrtgaiatt mlglfilafg dgiqfivaal
      121 alrsavpmla avgatigslv vivpaammge aawrrwplar lrtgiglifv llgvilglsa
      181 arli
//
LOCUS       WP_235188259             347 aa            linear   BCT 02-MAR-2025
DEFINITION  ROK family protein [Sphingomonas sp. FUKUSWIS1].
ACCESSION   WP_235188259
VERSION     WP_235188259.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas sp. FUKUSWIS1
  ORGANISM  Sphingomonas sp. FUKUSWIS1
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Sphingomonas sp. FUKUSWIS1"
                     /db_xref="taxon:1379701"
     Protein         1..347
                     /product="ROK family protein"
                     /calculated_mol_wt=35346
     Region          47..338
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mrlffelals igmavqrsra wgedivgesg tianigglvc edaapalgid fggtkieavl
       61 lskngaaawr qripnpgsyd saltaisnlv aaaddaggar ctvgigapgs psprtgimrn
      121 snstylngrp fredlaralg rpvrlvndan clalseaidg aaegaqsvfa lvigtgvggg
      181 vvlsgaaidg ahgiageigh lplpwpggre adpppcwcgl sgcieswvsg tgfaraaate
      241 hglalsapdi vaaarsgdpa araaldayvd rlgrvlalvv nlldpevivl gggmsnvtei
      301 yaglpdvvrh htfsdlwdgr ivparwgdas gvrgaarlwt kdpqvgh
//
LOCUS       WP_235188393             147 aa            linear   BCT 02-MAR-2025
DEFINITION  alcohol dehydrogenase catalytic domain-containing protein, partial
            [Sphingomonas sp. FUKUSWIS1].
ACCESSION   WP_235188393
VERSION     WP_235188393.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas sp. FUKUSWIS1
  ORGANISM  Sphingomonas sp. FUKUSWIS1
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 147)
  AUTHORS   Taneja,B. and Mande,S.C.
  TITLE     Conserved structural features and sequence patterns in the GroES
            fold family
  JOURNAL   Protein Eng 12 (10), 815-818 (1999)
   PUBMED   10556240
REFERENCE   2  (residues 1 to 147)
  AUTHORS   Murzin,A.G.
  TITLE     Structural classification of proteins: new superfamilies
  JOURNAL   Curr Opin Struct Biol 6 (3), 386-394 (1996)
   PUBMED   8804825
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08240.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Sphingomonas sp. FUKUSWIS1"
                     /db_xref="taxon:1379701"
     Protein         1..>147
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
     Region          1..>146
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
ORIGIN      
        1 mkaavlfean tplsiedvtv skpgprevli rtvavgvcrs dlhfvdgayp hamptipghe
       61 acgvveavgd evamvkvgdh vvtclsafcg hcefcvtgrm alcvdssvrr pkgapprlml
      121 gdrpiaqmln lsayaemmlv hehacva
//
LOCUS       WP_235188410             564 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: AMP-binding protein [unclassified Sphingomonas].
ACCESSION   WP_235188410
VERSION     WP_235188410.1
KEYWORDS    RefSeq.
SOURCE      unclassified Sphingomonas
  ORGANISM  unclassified Sphingomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 564)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="unclassified Sphingomonas"
                     /db_xref="taxon:196159"
     Protein         1..564
                     /product="AMP-binding protein"
                     /calculated_mol_wt=60452
     Region          13..563
                     /region_name="PRK08315"
                     /note="AMP-binding domain protein; Validated"
                     /db_xref="CDD:236236"
ORIGIN      
        1 mmgsvadrqq alraampvwe prtlhavldd tvratpdrpf vitddrswsy aeiaawskrl
       61 aaglvalgva pgekvalvla nypefvairy avsrigavcv pinilnrcde lrylldqsds
      121 vllvtmdrfr gvdyldmldq iapgwedsgg geglpnlrhv avlptgeapd rgaarmlysl
      181 eagggcaeit vdphavcdii ytsgttgppk gvllthdmlm rtaygsayar afedgrrilf
      241 slpmyhvfgy vegllavpfv ggaivpqlrf daiatlaaia rhhatdalli pamslavlda
      301 agegtydlsr whavlasggr aperlwqglr eglgvdeitt gygmtettas ttvtrpddpv
      361 erllttngrq rdvgvagdpq qggrlvtyrv vdpgtgavld dgetgelvas gygvtqgyyn
      421 kpeataaafd aegwlrtgdl griddngyit llgrtkesyr cggeqvlpte iedlltthad
      481 vvqahvvpip dermgevgva fvvarpgatl drsalqtlia arlarykvpr hillvdaaai
      541 pttasgrark fllteqalqi lelp
//
LOCUS       WP_235188422             434 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Sphingomonas sp. FUKUSWIS1].
ACCESSION   WP_235188422
VERSION     WP_235188422.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas sp. FUKUSWIS1
  ORGANISM  Sphingomonas sp. FUKUSWIS1
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Sphingomonas sp. FUKUSWIS1"
                     /db_xref="taxon:1379701"
     Protein         1..434
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44305
     Region          47..398
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(73,123..124,126..128,131,151,154..155,158,245,
                     248..249,252..254,257,286,290,341..342,346,350,370,
                     373..374,377..378,381)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mtdfarpiea aappfaktll pllalalama vgftmmgafg tvqegakael hlsdytlsli
       61 qglsaalpla vfsipigimv drynrvrmvi alafvwtlgt vltglahsvp llfvarmltg
      121 igttgaltaa lslcadfcvp tqrgramliv nlgkslgval alalsgalfg lfahgrapaw
      181 fagmmpwrsv hlclavvsvl ailplfllre pvrqevaagt hapfkvvage lwarrvflip
      241 lfvgqisvvm adaaagiwvs pvlsrtfhlq pdqfagwmga llfgagvvga ivgglsadrg
      301 qksvrrggll igailaaalg vpaalfpimp svplfgvavg llvtcgavtg vvtsvaltvl
      361 ipnelrglci gafiaiagli gyglaptlva aasgmlggea hlaqglaivg vvtsaisvva
      421 ftiamrrapv sata
//
LOCUS       WP_235188445             518 aa            linear   BCT 02-MAR-2025
DEFINITION  L,D-transpeptidase family protein, partial [Sphingomonas sp.
            FUKUSWIS1].
ACCESSION   WP_235188445
VERSION     WP_235188445.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas sp. FUKUSWIS1
  ORGANISM  Sphingomonas sp. FUKUSWIS1
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 518)
  AUTHORS   Biarrotte-Sorin,S., Hugonnet,J.E., Delfosse,V., Mainardi,J.L.,
            Gutmann,L., Arthur,M. and Mayer,C.
  TITLE     Crystal structure of a novel beta-lactam-insensitive peptidoglycan
            transpeptidase
  JOURNAL   J Mol Biol 359 (3), 533-538 (2006)
   PUBMED   16647082
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015679.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03734.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Sphingomonas sp. FUKUSWIS1"
                     /db_xref="taxon:1379701"
     Protein         1..>518
                     /product="L,D-transpeptidase family protein"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
     Region          <38..84
                     /region_name="Amelogenin"
                     /note="Amelogenins, cell adhesion proteins, play a role in
                     the biomineralisation of teeth; smart00818"
                     /db_xref="CDD:197891"
     Region          94..518
                     /region_name="YcbB"
                     /note="Murein L,D-transpeptidase YcbB/YkuD [Cell
                     wall/membrane/envelope biogenesis]; COG2989"
                     /db_xref="CDD:442228"
ORIGIN      
        1 mqslsktktn apwfgtmlsg aavvalllpv davsarapqe qlvppqlfqt qpqrpvspsn
       61 ppasqpalpa qamtprmavp pvvptvrmpv lsvaqvkqlq kllasdsmgq glalarpalv
      121 ldvdndtlvr ealdharavh agrlseadfq rdwgmrppaf dplpgfadav krdriaawfa
      181 alpppysgyd glkagleryr aiaaaggwsv lasgpdmtig atgprvtalr qrlavedkdv
      241 saggdrfdaa llegvrraqr ryglnpsgiv sgqtlgalnv satdrvrqim anmerwrwlp
      301 qelpkdriqv niaaavltvf dgdrpitsmr avtgrpgdet pmltstihsv vinppwnvpt
      361 siatrelwpk ekanpgylkr ngfkviggtr lqqaagtqsa lgrykfdfdn pysvylhdtp
      421 srakfasfsr lashgcvrle kpaelanlll agdpqwtpet vaatvdkgat vrarlskpvs
      481 vyllywtafa sgngqmnfra dpyswdstla skiearsa
//
LOCUS       WP_235188466             148 aa            linear   BCT 02-MAR-2025
DEFINITION  site-specific integrase, partial [Sphingomonas sp. FUKUSWIS1].
ACCESSION   WP_235188466
VERSION     WP_235188466.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas sp. FUKUSWIS1
  ORGANISM  Sphingomonas sp. FUKUSWIS1
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 148)
  AUTHORS   Subramanya,H.S., Arciszewska,L.K., Baker,R.A., Bird,L.E.,
            Sherratt,D.J. and Wigley,D.B.
  TITLE     Crystal structure of the site-specific recombinase, XerD
  JOURNAL   EMBO J 16 (17), 5178-5187 (1997)
   PUBMED   9311978
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014898.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02899.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Sphingomonas sp. FUKUSWIS1"
                     /db_xref="taxon:1379701"
     Protein         1..>148
                     /product="site-specific integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          1..>148
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
ORIGIN      
        1 mtspdtlpps mlwathlard rmrsvhtvra yravaerlta flvghwagav draalgrtst
       61 adlraylayr rgqglgnasa arelsavrgf lawanadaep prlkgprvqr gvprpispae
      121 avalagevad daaepwigar dwavlmll
//
LOCUS       WP_235187946             702 aa            linear   BCT 02-MAR-2025
DEFINITION  F-box protein [Ralstonia pseudosolanacearum].
ACCESSION   WP_235187946
VERSION     WP_235187946.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia pseudosolanacearum
  ORGANISM  Ralstonia pseudosolanacearum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Ralstonia; Ralstonia
            solanacearum species complex.
REFERENCE   1  (residues 1 to 702)
  AUTHORS   Skowyra,D., Craig,K.L., Tyers,M., Elledge,S.J. and Harper,J.W.
  TITLE     F-box proteins are receptors that recruit phosphorylated substrates
            to the SCF ubiquitin-ligase complex
  JOURNAL   Cell 91 (2), 209-219 (1997)
   PUBMED   9346238
REFERENCE   2  (residues 1 to 702)
  AUTHORS   Bai,C., Sen,P., Hofmann,K., Ma,L., Goebl,M., Harper,J.W. and
            Elledge,S.J.
  TITLE     SKP1 connects cell cycle regulators to the ubiquitin proteolysis
            machinery through a novel motif, the F-box
  JOURNAL   Cell 86 (2), 263-274 (1996)
   PUBMED   8706131
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012853.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00646.38
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Ralstonia pseudosolanacearum"
                     /db_xref="taxon:1310165"
     Protein         1..702
                     /product="F-box protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=72707
     Region          103..>135
                     /region_name="FBOX"
                     /note="A Receptor for Ubiquitination Targets; smart00256"
                     /db_xref="CDD:197608"
     Region          158..178
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          179..224
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          201..218
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          <225..407
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     Region          227..250
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          251..274
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          275..298
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          299..346
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          303..322
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <325..619
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     Region          347..370
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          371..394
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          395..442
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          443..494
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          495..518
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          519..542
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          543..566
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          567..614
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          569..590
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <589..>662
                     /region_name="AMN1"
                     /note="Antagonist of mitotic exit network protein 1;
                     cd09293"
                     /db_xref="CDD:187754"
     Region          615..638
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          639..658
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
ORIGIN      
        1 mqrhrsrrth caerpchrrv caltspffln rkddrtamgn qfsinrnrpa nageahasst
       61 eakpapdaas psrqvrvata psileglrkl rlpfnfgarv pplpeetwae iarrvdtktl
      121 hrmravsktl kaaadteirq ltvntvealq aakryaclet lkmdgyfgda dleglpaslr
      181 eldlfstryv sakglahlsk lplvrlkvra ngiraeaara laasttltal dirgngigda
      241 gaqalaants itsldasfnd igvagarala anttltsldl gfnaigdegl qalatnttlt
      301 sltvgsceig dagaaalann taltsvdltc nhigeegaeg laantvltsl dltrnsisdr
      361 gaaalagntt ltslcvnfnd iygrgarwla enttlttldi synpigdwga lgladnttlr
      421 slsvvagrig vegaralagn ttltaldisv naignegaqa laanatlttl slrscelraa
      481 aaaaaaeafk anttlasldi genrieaaga qaladntalt tlrvtgnqia magaqalaan
      541 rsltklnisq ndirsagaqa laantsltsl dvssasisaa gaqalaants itwlnindnh
      601 igdagaqala ahpaltslya cdnfigtagv qalaantrlt slsiwgnrig dagvkalaan
      661 ttltkltigk rvdkqlgeqi gdlawqelma svdrsgmtfh sl
//
LOCUS       WP_235188512              60 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6950 family protein [Citrobacter amalonaticus].
ACCESSION   WP_235188512
VERSION     WP_235188512.1
KEYWORDS    RefSeq.
SOURCE      Citrobacter amalonaticus
  ORGANISM  Citrobacter amalonaticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046717.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22262.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..60
                     /organism="Citrobacter amalonaticus"
                     /db_xref="taxon:35703"
     Protein         1..60
                     /product="DUF6950 family protein"
                     /calculated_mol_wt=6349
ORIGIN      
        1 miaryldevp vklaqrgdia ivenggakca gvvysgsvwv pgenglvslr vkplsvwrvr
//
LOCUS       WP_235188520             469 aa            linear   BCT 02-MAR-2025
DEFINITION  phospholipid carrier-dependent glycosyltransferase [Catenovulum
            agarivorans].
ACCESSION   WP_235188520
VERSION     WP_235188520.1
KEYWORDS    RefSeq.
SOURCE      Catenovulum agarivorans
  ORGANISM  Catenovulum agarivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Alteromonadaceae; Catenovulum.
REFERENCE   1  (residues 1 to 469)
  AUTHORS   Tavares-Carreon,F., Fathy Mohamed,Y., Andrade,A. and Valvano,M.A.
  TITLE     ArnT proteins that catalyze the glycosylation of lipopolysaccharide
            share common features with bacterial N-oligosaccharyltransferases
  JOURNAL   Glycobiology 26 (3), 286-300 (2016)
   PUBMED   26515403
REFERENCE   2  (residues 1 to 469)
  AUTHORS   Petrou,V.I., Herrera,C.M., Schultz,K.M., Clarke,O.B., Vendome,J.,
            Tomasek,D., Banerjee,S., Rajashankar,K.R., Belcher Dufrisne,M.,
            Kloss,B., Kloppmann,E., Rost,B., Klug,C.S., Trent,M.S., Shapiro,L.
            and Mancia,F.
  TITLE     Structures of aminoarabinose transferase ArnT suggest a molecular
            basis for lipid A glycosylation
  JOURNAL   Science 351 (6273), 608-612 (2016)
   PUBMED   26912703
REFERENCE   3  (residues 1 to 469)
  AUTHORS   Gentzsch,M. and Tanner,W.
  TITLE     The PMT gene family: protein O-glycosylation in Saccharomyces
            cerevisiae is vital
  JOURNAL   EMBO J 15 (21), 5752-5759 (1996)
   PUBMED   8918452
REFERENCE   4  (residues 1 to 469)
  AUTHORS   Martin-Blanco,E. and Garcia-Bellido,A.
  TITLE     Mutations in the rotated abdomen locus affect muscle development
            and reveal an intrinsic asymmetry in Drosophila
  JOURNAL   Proc Natl Acad Sci U S A 93 (12), 6048-6052 (1996)
   PUBMED   8650217
REFERENCE   5  (residues 1 to 469)
  AUTHORS   Lussier,M., Gentzsch,M., Sdicu,A.M., Bussey,H. and Tanner,W.
  TITLE     Protein O-glycosylation in yeast. The PMT2 gene specifies a second
            protein O-mannosyltransferase that functions in addition to the
            PMT1-encoded activity
  JOURNAL   J Biol Chem 270 (6), 2770-2775 (1995)
   PUBMED   7852348
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014425.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02366.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Catenovulum agarivorans"
                     /db_xref="taxon:1172192"
     Protein         1..469
                     /product="phospholipid carrier-dependent
                     glycosyltransferase"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0000030 - mannosyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006493 - protein O-linked glycosylation
                     [Evidence IEA]"
                     /calculated_mol_wt=54303
     Region          23..469
                     /region_name="PMT1"
                     /note="Dolichyl-phosphate-mannose--protein O-mannosyl
                     transferase [Posttranslational modification, protein
                     turnover, chaperones]; COG1928"
                     /db_xref="CDD:441531"
ORIGIN      
        1 mtgkillefq tkmaptryil lyvgiaiaal avrfyqlgdi nkpvfdeiyf pkfayhyiqq
       61 qpffhshppl akytmqgaia lyhalpwvne palgtvdfsq lnpvsyrwgn atlgffaaif
      121 faysawrltk shlftvivfa fvgldgaliv ssrfglsnvh iqfwgglsvf lalltvqtrn
      181 wlyplllgis lgcvacikws glsywamsia lcsliylvkl lqvnlasnsw lksgliissp
      241 mrksllpylf cltlipalty svlwlpdlql ntkfdfvqth qqffsyhnnr vaedahpycs
      301 kwyswplmqr pisyhfeklp ineqaqacyk nvhsfanpll ywwssfavlf mcfytvykir
      361 fdikhriltn elvtcgvill gyfanwlpwa lvsrctflyh yqsaaifsfm slayllcllh
      421 ktnlrltrvl fviilvsifl sfvywlpfql gipleksafy qrmwfnswi
//
LOCUS       WP_235188564             582 aa            linear   BCT 02-MAR-2025
DEFINITION  GH39 family glycosyl hydrolase [Catenovulum agarivorans].
ACCESSION   WP_235188564
VERSION     WP_235188564.1
KEYWORDS    RefSeq.
SOURCE      Catenovulum agarivorans
  ORGANISM  Catenovulum agarivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Alteromonadaceae; Catenovulum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013400.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01229.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Catenovulum agarivorans"
                     /db_xref="taxon:1172192"
     Protein         1..582
                     /product="GH39 family glycosyl hydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=66025
     Region          <170..>294
                     /region_name="XynB"
                     /note="Beta-xylosidase [Carbohydrate transport and
                     metabolism]; COG3664"
                     /db_xref="CDD:442881"
ORIGIN      
        1 mkianlkllh kmllplllla agcstapfqp kadnsqsaqa stqlfadfts kqaqigtiyd
       61 ffdvavrter gnpkgkpatf grkakvntvr mlggwynqdi sgdtyqwdge kyiynfaaat
      121 kridawldnd wdifqivldn ppwafqrgyk fvtepdgkhy lakdrvgvyg nglppkdaqa
      181 wnqyiqafiq hlvtkygket vlswrfrigs eidtrpqhwa atrqaffdhy kntvnavkav
      241 lpnatvgahf reathksqyv dytgnkeday apyfvewakq nqvpydflai syyphithph
      301 emdmqqvyqt qiapilehpd ynpnasfeih eykfivkmlr agfvsvatsh nsaffamlsk
      361 mmlenniqev fqwgnmrags yspeamtqla lhrmvgnkly knaisgapni egniidgifs
      421 qkadksgfdi ltfnfnkenm syqkpepial elttnkpags qfsyrvaqid qtsnldqlfm
      481 aefpkanipq sqggwrkdda hptasithal nktglkvfql tkakygkinq lkwsewqeat
      541 tqvsaesqvn aklqagsgkg slikiynqlp sftvqkyqvr wr
//
LOCUS       WP_235188595             333 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1186 domain-containing protein [Catenovulum agarivorans].
ACCESSION   WP_235188595
VERSION     WP_235188595.1
KEYWORDS    RefSeq.
SOURCE      Catenovulum agarivorans
  ORGANISM  Catenovulum agarivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Alteromonadaceae; Catenovulum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018400.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06685.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Catenovulum agarivorans"
                     /db_xref="taxon:1172192"
     Protein         1..333
                     /product="DUF1186 domain-containing protein"
                     /calculated_mol_wt=37243
     Region          9..>203
                     /region_name="DUF1186"
                     /note="Protein of unknown function (DUF1186); pfam06685"
                     /db_xref="CDD:429070"
     Region          <276..331
                     /region_name="SWIM_PBPRA1643"
                     /note="SWIM/SEC-C metal-binding motif protein, PBPRA1643
                     family; TIGR04102"
                     /db_xref="CDD:200353"
     Region          <310..333
                     /region_name="YecA"
                     /note="Uncharacterized conserved protein YecA, UPF0149
                     family, contains C-terminal Zn-binding SEC-C motif
                     [Function unknown]; COG3318"
                     /db_xref="CDD:442547"
ORIGIN      
        1 mnahqtkqmn leqilqalas tendslpldg ikqakahwsv vcpeilntid kfiadpaqlt
       61 pqqqstlfyg tfllaemkhs qafdkilelf scqdtfltpi esvfgdtlte lipsvfyila
      121 dgnpeilsdy ildshsamyg kgsaievvfa qyeagavsra qlfeyvsywk stfltnlsls
      181 nryllsvlat scidyqldef knefialcsk dvfdedrapk deikawdhak gikqiesgli
      241 ytefnlaevf atwqtadnva gdghqqqqhq qqmddeinql maqatdqlrs ntlfgeeyil
      301 qnsvpvsslt akvgrndpcp cgsgkkykkc clh
//
LOCUS       WP_235188596             715 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Catenovulum agarivorans].
ACCESSION   WP_235188596
VERSION     WP_235188596.1
KEYWORDS    RefSeq.
SOURCE      Catenovulum agarivorans
  ORGANISM  Catenovulum agarivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Alteromonadaceae; Catenovulum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00528.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Catenovulum agarivorans"
                     /db_xref="taxon:1172192"
     Protein         1..715
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=79574
     Region          1..715
                     /region_name="COG4590"
                     /note="ABC-type uncharacterized transport system, permease
                     component [General function prediction only]"
                     /db_xref="CDD:443647"
ORIGIN      
        1 mvlvallmif fyllyvvqpi fedvsieptl tialddehkt lalgtddhve tayrltsepa
       61 leyyqlhgad ktklikqfei nndseitafa kamphvkqfa yafannsvvi ikpsfkigfa
      121 nnrrtiepri dfpfgkagls idsdapidkf afattpendg agvvyqsqtq qavyysrllg
      181 einfmtdeie wsqsnvelpn itgavdqlhl tadlsrafvl qngymyvfdv rnankvklvs
      241 qnrvveygtq vtastllaga ssiviadnqg niaqwfevnt eqgreftkir afksdnkdin
      301 glypeffrrs fvatsqsgal dvfyttseah lyaeqlldqa ildlaispra nayisltsqg
      361 ihlfdveneh pevtwsalwq etwyegysep dyiwqstsas ddfeskfslv pitfgtikaa
      421 fyamlfsvpi alaaaiytay fmpakirtvv kptveimeal ptvilgflag lwlapiieeh
      481 laaiailiil mpvaiiafaf mwhslprkil nrlptgmdsl llipvilima yvlielspwf
      541 ndvffdgdvr lfitdslgis fdqrnslvvg iamgfavipt ifsiaedavf svpkhlshgs
      601 lalgasqwqt lvrvvlltas pgifsavmmg lgravgetmi vlmatgntpi mdwsvfqgmr
      661 tlsaniavem pesevgsthy rilflaafvl fiftfvfnti aefvrqrlrd kyssl
//
LOCUS       WP_235188768             111 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: iron chelate uptake ABC transporter family permease
            subunit [Pantoea].
ACCESSION   WP_235188768
VERSION     WP_235188768.1
KEYWORDS    RefSeq.
SOURCE      Pantoea
  ORGANISM  Pantoea
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae.
REFERENCE   1  (residues 1 to 111)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013219.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01032.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Pantoea"
                     /db_xref="taxon:53335"
     Protein         1..111
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /calculated_mol_wt=11830
     Region          <7..>108
                     /region_name="FepD"
                     /note="ABC-type Fe3+-siderophore transport system,
                     permease component [Inorganic ion transport and
                     metabolism]; COG0609"
                     /db_xref="CDD:440374"
ORIGIN      
        1 mrensgriil agipgtqlfn altayivsts anaeqsrsvm fwllgslsgv rwpdamlahv
       61 vttaglliil cyarsldtlt fgeevsatlg triltvrivl llttalisdi h
//
LOCUS       WP_235188549             223 aa            linear   BCT 02-MAR-2025
DEFINITION  putative glycoside hydrolase [Catenovulum agarivorans].
ACCESSION   WP_235188549
VERSION     WP_235188549.1
KEYWORDS    RefSeq.
SOURCE      Catenovulum agarivorans
  ORGANISM  Catenovulum agarivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Alteromonadaceae; Catenovulum.
REFERENCE   1  (residues 1 to 223)
  AUTHORS   Nakatani,Y., Cutfield,S.M., Cowieson,N.P. and Cutfield,J.F.
  TITLE     Structure and activity of exo-1,3/1,4-beta-glucanase from marine
            bacterium Pseudoalteromonas sp. BB1 showing a novel C-terminal
            domain
  JOURNAL   FEBS J 279 (3), 464-478 (2012)
   PUBMED   22129429
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037461.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18559.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Catenovulum agarivorans"
                     /db_xref="taxon:1172192"
     Protein         1..223
                     /product="putative glycoside hydrolase"
                     /calculated_mol_wt=24833
     Region          47..210
                     /region_name="Exop_C"
                     /note="Galactose-binding domain-like; pfam18559"
                     /db_xref="CDD:436577"
ORIGIN      
        1 mlylsaimrq sknivnflli tsslavasis yannpltdyi vegnpvspwk lglgnafsws
       61 ekvenqqgkt kkgnlsvtpt krnkqgdain vkwrgkyads awfsiltlng hkvdissved
      121 qaalnlevrv hrypnsiaki gmrcnwknec kselplnali knlpkdewsn ltiplncfnq
      181 dgqfdfknlt difmistqgk mefdiaatyl vglpqgntgc kkq
//
LOCUS       WP_235188782             592 aa            linear   BCT 02-MAR-2025
DEFINITION  heparinase II/III domain-containing protein [Pantoea agglomerans].
ACCESSION   WP_235188782
VERSION     WP_235188782.1
KEYWORDS    RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (residues 1 to 592)
  AUTHORS   Meier,E.L., Razavi,S., Inoue,T. and Goley,E.D.
  TITLE     A novel membrane anchor for FtsZ is linked to cell wall hydrolysis
            in Caulobacter crescentus
  JOURNAL   Mol Microbiol 101 (2), 265-280 (2016)
   PUBMED   27028265
REFERENCE   2  (residues 1 to 592)
  AUTHORS   Dong,W., Lu,W., McKeehan,W.L., Luo,Y. and Ye,S.
  TITLE     Structural basis of heparan sulfate-specific degradation by
            heparinase III
  JOURNAL   Protein Cell 3 (12), 950-961 (2012)
   PUBMED   23011846
REFERENCE   3  (residues 1 to 592)
  AUTHORS   Shaya,D., Tocilj,A., Li,Y., Myette,J., Venkataraman,G.,
            Sasisekharan,R. and Cygler,M.
  TITLE     Crystal structure of heparinase II from Pedobacter heparinus and
            its complex with a disaccharide product
  JOURNAL   J Biol Chem 281 (22), 15525-15535 (2006)
   PUBMED   16565082
REFERENCE   4  (residues 1 to 592)
  AUTHORS   Pojasek,K., Shriver,Z., Hu,Y. and Sasisekharan,R.
  TITLE     Histidine 295 and histidine 510 are crucial for the enzymatic
            degradation of heparan sulfate by heparinase III
  JOURNAL   Biochemistry 39 (14), 4012-4019 (2000)
   PUBMED   10747789
REFERENCE   5  (residues 1 to 592)
  AUTHORS   Su,H., Blain,F., Musil,R.A., Zimmermann,J.J., Gu,K. and
            Bennett,D.C.
  TITLE     Isolation and expression in Escherichia coli of hepB and hepC,
            genes coding for the glycosaminoglycan-degrading enzymes heparinase
            II and heparinase III, respectively, from Flavobacterium heparinum
  JOURNAL   Appl Environ Microbiol 62 (8), 2723-2734 (1996)
   PUBMED   8702264
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019552.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07940.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Pantoea agglomerans"
                     /db_xref="taxon:549"
     Protein         1..592
                     /product="heparinase II/III domain-containing protein"
                     /GO_function="GO:0016829 - lyase activity [Evidence IEA]"
                     /calculated_mol_wt=66790
     Region          <2..>54
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          <33..133
                     /region_name="AlgLyase"
                     /note="Alginate Lyase A1-III; enzymatically depolymerizes
                     alginate, a complex copolymer of beta-D-mannuronate and
                     alpha-L-guluronate, by cleaving the beta-(1,4) glycosidic
                     bond; cl00179"
                     /db_xref="CDD:444729"
     Region          258..>396
                     /region_name="Hepar_II_III"
                     /note="Heparinase II/III-like protein; pfam07940"
                     /db_xref="CDD:429747"
ORIGIN      
        1 mstteqhlie gdllremalq avvthakdfd iihnhglwsv aavgicgyvl ndgdlvakal
       61 yglrgdgesg gffaqltqlf spdgyymegp yyhrfairpl lmvaevierr qpelniyqfk
      121 erviartada lmacafpdgt lpalndasks mnindegiii atslcfqryk pddvliamaq
      181 hqnevwvsaa glllsnaaqs vtprpfnwgc rilrdgpdge rggvgilriq deeqdinmal
      241 lafgqhgsds rlhaaldhgh fdglhlslfn rgreylrdyg fgrwvnvepk fggryipend
      301 syckqtvahn tvvvdersqh qgdtataerh wgqlhfcvpn hpygqgvsal ahdyypgidm
      361 qrsvlmlkle gfrtplvvdl frltseeehq ydyvfhhqgq llrtdfdyys fpqlvplgkq
      421 dgyqhlwkqg rariapqesv lvswldgdsy ysyisalpag gevifarsga ndphfnlrse
      481 paliartwgk smlfasvyet hgyfneases stdargqivr velighdddv smvrlhlvde
      541 rqltivvcnr wpsmtqpvse qgawfnwngn rfhwqgafsv qwespdsltr ky
//
LOCUS       WP_235188813             416 aa            linear   BCT 02-MAR-2025
DEFINITION  TcaA 3rd/4th domain-containing protein [Exiguobacterium artemiae].
ACCESSION   WP_235188813
VERSION     WP_235188813.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium artemiae
  ORGANISM  Exiguobacterium artemiae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis; Exiguobacterium.
REFERENCE   1  (residues 1 to 416)
  AUTHORS   Douglas,E.J.A., Palk,N., Brignoli,T., Altwiley,D., Boura,M.,
            Laabei,M., Recker,M., Cheung,G.Y.C., Liu,R., Hsieh,R.C., Otto,M.,
            O'Brien,E., McLoughlin,R.M. and Massey,R.C.
  TITLE     Extensive remodelling of the cell wall during the development of
            Staphylococcus aureus bacteraemia
  JOURNAL   Elife 12, 87026 (2023)
   PUBMED   37401629
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046933.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22820.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Exiguobacterium artemiae"
                     /db_xref="taxon:340145"
     Protein         1..416
                     /product="TcaA 3rd/4th domain-containing protein"
                     /calculated_mol_wt=46129
     Region          19..390
                     /region_name="YvbJ"
                     /note="Uncharacterized protein YvbJ, contains N-terminal
                     Zn ribbon domain [Function unknown]; COG4640"
                     /db_xref="CDD:443678"
ORIGIN      
        1 mnkttkalls alvllliagg ayyglstqwf tveattnevr dairsgdakl laehtefngk
       61 qidqsmaqrf ldalketpeq kksfmeyllm agtslqaene sdvpaqivad grqfgifkdy
      121 rlqlegvrte visnfegtkv tlvnpvgtes skasadgiqm dgiypgltda kiaydgeygk
      181 esseviinpl tldasnrkye itlkgnavsl dqtypdafli vdgkvtskti seldsygpip
      241 kngitlaien qfawgdetse dvlvkpntkk vdfvfqpsea tldqieqvve ehasdwvdaa
      301 nyqdtsyftl vddasyiakq qknyddwsrk dlewdgefms asidrssakf veygdtvgie
      361 lmattyirge lysydsespg kstskslfry lftygvapds dsyeesfriq qatnik
//
LOCUS       WP_235188815             417 aa            linear   BCT 02-MAR-2025
DEFINITION  SH3 domain-containing protein [Exiguobacterium artemiae].
ACCESSION   WP_235188815
VERSION     WP_235188815.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium artemiae
  ORGANISM  Exiguobacterium artemiae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis; Exiguobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019844.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08239.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Exiguobacterium artemiae"
                     /db_xref="taxon:340145"
     Protein         1..417
                     /product="SH3 domain-containing protein"
                     /calculated_mol_wt=45329
     Region          26..153
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          194..>403
                     /region_name="DacC"
                     /note="D-alanyl-D-alanine carboxypeptidase [Cell
                     wall/membrane/envelope biogenesis]; COG1686"
                     /db_xref="CDD:441292"
ORIGIN      
        1 mkslfriglt lvllltlclp alpaqaasyq vivtstigan irskpstsss atitrrapyk
       61 atftavsysn gwykikdgga yrylsnqvak kvgsssvkty kiivystaga nvrtspstas
      121 sknikrhaty kskfnavsys ngwykvkgkt nyyyvsnqva kklttsspap tggsypvasm
      181 ryfklgssgy eltkesfarr ypasttkllt avvaydaaaq kgtldqtftl tysmlsvpsg
      241 sstagfrsgd kvtmrqllng mlirsgndaa kaiavrtags egnfvslmns rasrigmsss
      301 hfmnphgfyh pshyttaadm qklantyaky sylmtvsgrk syqtavkgpy artltwyhtn
      361 tslpgdtrvy asktgytpes aytrvffikk gstryglvtl kgtlpqtett lrsvlnr
//
LOCUS       WP_235188886             181 aa            linear   BCT 02-MAR-2025
DEFINITION  imm11 family protein [Exiguobacterium artemiae].
ACCESSION   WP_235188886
VERSION     WP_235188886.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium artemiae
  ORGANISM  Exiguobacterium artemiae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis; Exiguobacterium.
REFERENCE   1  (residues 1 to 181)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019408.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07791.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Exiguobacterium artemiae"
                     /db_xref="taxon:340145"
     Protein         1..181
                     /product="imm11 family protein"
                     /calculated_mol_wt=21426
ORIGIN      
        1 mnkvrvwseq lmgkgwmatc hhqidryrft tgewflnasl lafsieqdad mlpdvlpnel
       61 riplvsermk qilerltpfs vqclrvqlkt rtglinyyli nilavrrveh lhkteifrtl
      121 rkrqvyfmte riistslgph hilrderter iflsdtlarc fqqlavtgih fdeinrmeei
      181 i
//
LOCUS       WP_235189004             305 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Leuconostoc mesenteroides].
ACCESSION   WP_235189004
VERSION     WP_235189004.1
KEYWORDS    RefSeq.
SOURCE      Leuconostoc mesenteroides
  ORGANISM  Leuconostoc mesenteroides
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Leuconostoc.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Leuconostoc mesenteroides"
                     /db_xref="taxon:1245"
     Protein         1..305
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=33871
     Region          <1..298
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(9..10,12..14,17,37,40..41,44,120,123..124,127..129,
                     132,169,173,222..223,227,231,247,250..251,254..255,258)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mmflgniasg lispaseaml idvstektra fmyainywan nlalmvgmii ggwlferhfl
       61 llttilviin issllltkyl itetheqtin kkshvgfqsv fhsyqivlcd arfviftlgg
      121 illlsvefqr tnfiaihlaq sfihtkwlgi sfdgvkilsl ltsintaiiv lftapisrwi
      181 pnrntkkifv mgtmlftlgy alqayvntlp llifssfils fgelmyvptr qskladlmpe
      241 nkrgaylafn gsifqlgkvi aasmligapf lvsfgiatti mflglgaiil tlwalrlipd
      301 nqnni
//
LOCUS       WP_235188760              40 aa            linear   BCT 02-MAR-2025
DEFINITION  YhfG family protein [Pantoea agglomerans].
ACCESSION   WP_235188760
VERSION     WP_235188760.1
KEYWORDS    RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (residues 1 to 40)
  AUTHORS   Stanger,F.V., Harms,A., Dehio,C. and Schirmer,T.
  TITLE     Crystal Structure of the Escherichia coli Fic Toxin-Like Protein in
            Complex with Its Cognate Antitoxin
  JOURNAL   PLoS One 11 (9), e0163654 (2016)
   PUBMED   27657533
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022288.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10832.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..40
                     /organism="Pantoea agglomerans"
                     /db_xref="taxon:549"
     Protein         1..40
                     /product="YhfG family protein"
                     /calculated_mol_wt=4619
     Region          2..>30
                     /region_name="DUF2559"
                     /note="Protein of unknown function (DUF2559); cl23922"
                     /db_xref="CDD:451608"
ORIGIN      
        1 mankltekqk vtlwrqrrsa syqascrleg wkalrqmkpa
//
LOCUS       WP_235189045             375 aa            linear   BCT 02-MAR-2025
DEFINITION  cellulase family glycosylhydrolase [Vibrio cholerae].
ACCESSION   WP_235189045
VERSION     WP_235189045.1
KEYWORDS    RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012377.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00150.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Vibrio cholerae"
                     /db_xref="taxon:666"
     Protein         1..375
                     /product="cellulase family glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0000272 - polysaccharide catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=41316
     Region          34..279
                     /region_name="Cellulase"
                     /note="Cellulase (glycosyl hydrolase family 5); pfam00150"
                     /db_xref="CDD:395098"
     Region          325..358
                     /region_name="CBM_10"
                     /note="Cellulose or protein binding domain; pfam02013"
                     /db_xref="CDD:251036"
ORIGIN      
        1 mkyfnfcivt llflfsntvf aglyvsgsvl yeyngipfki rginhahawy adkletalqg
       61 isstgantvr ivlsnghrwn ktsaeevgni iqlaksynli tvlevhdttg ygeessaadl
      121 nsaadywiei keklvgeeny viinlgnepf gngiissdwi nahkdainrl rsegmnhvim
      181 vdapnwgqdw qnimldnats ildsdplhni mfsvhmyevy gdystinnyi ssfinkglsl
      241 vvgefaathk gsnvdesaim ertetlslgy igwswsgndd stadldivnn wnndsyttwg
      301 ntlingengi kstsqiatvf tckddcsges tqyptcssss ldpdgdgwgw eneqscivqd
      361 sndtapngya ycsse
//
LOCUS       WP_235189094             174 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxypeptidase-like regulatory domain-containing protein
            [Flavobacterium psychrophilum].
ACCESSION   WP_235189094
VERSION     WP_235189094.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium psychrophilum
  ORGANISM  Flavobacterium psychrophilum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 174)
  AUTHORS   Cho,K.H. and Salyers,A.A.
  TITLE     Biochemical analysis of interactions between outer membrane
            proteins that contribute to starch utilization by Bacteroides
            thetaiotaomicron
  JOURNAL   J Bacteriol 183 (24), 7224-7230 (2001)
   PUBMED   11717282
REFERENCE   2  (residues 1 to 174)
  AUTHORS   Shipman,J.A., Berleman,J.E. and Salyers,A.A.
  TITLE     Characterization of four outer membrane proteins involved in
            binding starch to the cell surface of Bacteroides thetaiotaomicron
  JOURNAL   J Bacteriol 182 (19), 5365-5372 (2000)
   PUBMED   10986238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025092.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13715.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Flavobacterium psychrophilum"
                     /db_xref="taxon:96345"
     Protein         1..174
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /calculated_mol_wt=18895
     Region          30..>125
                     /region_name="OMP_RagA_SusC"
                     /note="TonB-linked outer membrane protein, SusC/RagA
                     family; TIGR04056"
                     /db_xref="CDD:274948"
ORIGIN      
        1 mistkkafas illlsistlf aqlkteskki titgkiieka tslpleyati tlkkpnttqa
       61 lfggitdnkg nfsieinpsi ydlkfefisf ktieikekll kfntnlgqis leddaqklda
      121 veirgektti dikldkkvyn vgkdilvrgg tvsdvldnvp svaisaegav slrg
//
LOCUS       WP_235189096             185 aa            linear   BCT 02-MAR-2025
DEFINITION  N-6 DNA methylase [Flavobacterium psychrophilum].
ACCESSION   WP_235189096
VERSION     WP_235189096.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium psychrophilum
  ORGANISM  Flavobacterium psychrophilum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 185)
  AUTHORS   Schouler,C., Gautier,M., Ehrlich,S.D. and Chopin,M.C.
  TITLE     Combinational variation of restriction modification specificities
            in Lactococcus lactis
  JOURNAL   Mol Microbiol 28 (1), 169-178 (1998)
   PUBMED   9593305
REFERENCE   2  (residues 1 to 185)
  AUTHORS   Schouler,C., Clier,F., Lerayer,A.L., Ehrlich,S.D. and Chopin,M.C.
  TITLE     A type IC restriction-modification system in Lactococcus lactis
  JOURNAL   J Bacteriol 180 (2), 407-411 (1998)
   PUBMED   9440532
REFERENCE   3  (residues 1 to 185)
  AUTHORS   Thorpe,P.H., Ternent,D. and Murray,N.E.
  TITLE     The specificity of sty SKI, a type I restriction enzyme, implies a
            structure with rotational symmetry
  JOURNAL   Nucleic Acids Res 25 (9), 1694-1700 (1997)
   PUBMED   9108149
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02384.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Flavobacterium psychrophilum"
                     /db_xref="taxon:96345"
     Protein         1..185
                     /product="N-6 DNA methylase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=20955
     Region          5..>167
                     /region_name="YtxK"
                     /note="Adenine-specific DNA N6-methylase [Replication,
                     recombination and repair]; COG0827"
                     /db_xref="CDD:440589"
ORIGIN      
        1 mrlienasae klrggfytpe kiaafvlkwa ingsvnsdil epscgdgvfi eqikennyqy
       61 nsitgiefde ieaqksdnim lqnctiined fhkycnnien rfdiivgnpp yiryqyfdve
      121 qqneaikifn ksglkysklt nawvsfvigs sqllkengki gfvlpaenia sflcntierv
      181 fsqvl
//
LOCUS       WP_235189241             112 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF1878 family protein [Exiguobacterium].
ACCESSION   WP_235189241
VERSION     WP_235189241.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium
  ORGANISM  Exiguobacterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020533.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08963.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Exiguobacterium"
                     /db_xref="taxon:33986"
     Protein         1..112
                     /product="DUF1878 family protein"
                     /calculated_mol_wt=13199
     Region          2..96
                     /region_name="DUF1878"
                     /note="Protein of unknown function (DUF1878); pfam08963"
                     /db_xref="CDD:401059"
ORIGIN      
        1 msleekvehl ayqmkillei vdwtdrpfey eviranltkq evesfyqlle eiraqqneql
       61 rygytsiepl lvhfagmldv rldvktilea cvrqgieldv teplyrqvrl ld
//
LOCUS       WP_235189247             187 aa            linear   BCT 02-MAR-2025
DEFINITION  prepilin-type N-terminal cleavage/methylation domain-containing
            protein [Exiguobacterium sp. NG55].
ACCESSION   WP_235189247
VERSION     WP_235189247.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium sp. NG55
  ORGANISM  Exiguobacterium sp. NG55
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis; Exiguobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019575.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07963.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Exiguobacterium sp. NG55"
                     /db_xref="taxon:375477"
     Protein         1..187
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /calculated_mol_wt=20717
ORIGIN      
        1 mrhyanrslk rlsrqliemk kredgftlve llvtvvvasi lsgviitafi tgtlgfqmtn
       61 etsdlrsead yliasvlsdv nrtefdavte vdgsfqfyrl sapgisdagm iyreagyvpt
      121 dlilsedsft psnpqitver mtiqlkdpvs dprrptymtg glieiemdlt qsndpdsvtt
      181 fessipf
//
LOCUS       WP_235189250             518 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase [Exiguobacterium sp. NG55].
ACCESSION   WP_235189250
VERSION     WP_235189250.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium sp. NG55
  ORGANISM  Exiguobacterium sp. NG55
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis; Exiguobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06028.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Exiguobacterium sp. NG55"
                     /db_xref="taxon:375477"
     Protein         1..518
                     /product="alpha/beta hydrolase"
                     /calculated_mol_wt=58868
     Region          232..508
                     /region_name="COG4814"
                     /note="Uncharacterized conserved protein with an
                     alpha/beta hydrolase fold [Function unknown]"
                     /db_xref="CDD:443842"
ORIGIN      
        1 mrinydatvh ydqsvslett yafrdhpvmk llnlrldwdt wkeqaeengy etedysspdd
       61 yegmilkktf knvdelqqik eewktgpagi lvppdiqfdi dqregiwfds ytlqtnldlr
      121 ldrvdlpgve ltgspkklae ryirqadirf nltvptgvfv edgtgldlrs mkhvewqvyg
      181 grqnnvklva hvpnvkawvi tiivlvaaii lsyfiwrkyr rnvgnpkets irsrllglli
      241 vslslaliiv tfrqelaner qseairqasq tnefiptfav hgllgtdrtf lrfsqtmeqs
      301 gqatdgalct vtvkgktdce iydfsstrpi vriefedaea slnnqtkwln aaietykktr
      361 nrsfdrmyii ghsmggvaaa nyilnqetyi vdkfvtfdsp fggtrlanfg lsasnfgvnt
      421 gspairdlsp nsdglqafqs kletwprsvq vlsfsgrgge fnliepassl lleeytnniq
      481 tetvpydhfs lhrksdvlke tgkflyeytn efnpietn
//
LOCUS       WP_235189262             134 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ion channel [Exiguobacterium].
ACCESSION   WP_235189262
VERSION     WP_235189262.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium
  ORGANISM  Exiguobacterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis.
REFERENCE   1  (residues 1 to 134)
  AUTHORS   Choe,S.
  TITLE     Potassium channel structures
  JOURNAL   Nat Rev Neurosci 3 (2), 115-121 (2002)
   PUBMED   11836519
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019500.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07885.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Exiguobacterium"
                     /db_xref="taxon:33986"
     Protein         1..134
                     /product="ion channel"
                     /calculated_mol_wt=14950
     Region          73..125
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
ORIGIN      
        1 mfglntillt iallfislnv fwffkrktyk qtgfdgrlfa qlfvsllgvm lgftliyyal
       61 srdsvilvts lesmnavept wenllyfsgv tllsigfgdl lpigltrlfa iiegaigill
      121 psaffiksmy qkdk
//
LOCUS       WP_235189272             297 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5996 family protein [Exiguobacterium sp. NG55].
ACCESSION   WP_235189272
VERSION     WP_235189272.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium sp. NG55
  ORGANISM  Exiguobacterium sp. NG55
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis; Exiguobacterium.
REFERENCE   1  (residues 1 to 297)
  AUTHORS   Watanabe,K., Hotta,K., Nakaya,M., Praseuth,A.P., Wang,C.C.,
            Inada,D., Takahashi,K., Fukushi,E., Oguri,H. and Oikawa,H.
  TITLE     Escherichia coli allows efficient modular incorporation of newly
            isolated quinomycin biosynthetic enzyme into echinomycin
            biosynthetic pathway for rational design and synthesis of potent
            antibiotic unnatural natural product
  JOURNAL   J Am Chem Soc 131 (26), 9347-9353 (2009)
   PUBMED   19514719
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039315.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19459.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Exiguobacterium sp. NG55"
                     /db_xref="taxon:375477"
     Protein         1..297
                     /product="DUF5996 family protein"
                     /calculated_mol_wt=34237
     Region          7..256
                     /region_name="DUF5996"
                     /note="Family of unknown function (DUF5996); pfam19459"
                     /db_xref="CDD:466096"
ORIGIN      
        1 mqiplhsdwh dtkltlhlis qllgkiklkl appepqwghv slpltvhgft tgllfegert
       61 lqidvdllts clvihvedqt daipieagkt iksyhddvfn rlrthgvnvr inpkpqemsf
      121 kglldtdetp laydatyarr glrlfqraah eqltylsklr crkikpalfw gtfdvsslvi
      181 ypiehpfped kviervafde qliefgfwlg ddvterpsyf vlpypflfrp lptetlkpea
      241 ayydaeksef flpldegtsr evqtflstsf dilmdemdwt trehffiplk leeesge
//
LOCUS       WP_235189320             715 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Borreliella afzelii].
ACCESSION   WP_235189320
VERSION     WP_235189320.1
KEYWORDS    RefSeq.
SOURCE      Borreliella afzelii (Borrelia afzelii)
  ORGANISM  Borreliella afzelii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Spirochaetales; Borreliaceae; Borreliella.
REFERENCE   1  (residues 1 to 715)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 715)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019344.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07724.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Borreliella afzelii"
                     /db_xref="taxon:29518"
     Protein         1..715
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=81698
     Region          135..713
                     /region_name="ClpA"
                     /note="ATP-dependent Clp protease, ATP-binding subunit
                     ClpA [Posttranslational modification, protein turnover,
                     chaperones]; COG0542"
                     /db_xref="CDD:440308"
ORIGIN      
        1 msiittpkks eikfidtktl knikqevlfe idklekilie kneiiipkin keifalikea
       61 kkefkskpli gakeifyqil knkkllkkyk lskstfdfkd qnvleymekn kirlietyke
      121 fdeeirlene hfeiekyvkn ltalaknkkl dpligreaei ktlanillrr nknsamlige
      181 pgvgktaive glassivqkk issklqdkti lmlkvsnlvs gtkyrgefed rlnniikyie
      241 knkntiifid eihtligagn segaldasni lkpslsraei qiigattyne yrkyiskdka
      301 farrfqtitv repnekdtlk iikniaknfe dyhgviyeks altnivklss kylinkrfpd
      361 kaidiidiag aikkeeltkd nvvtsddiqk aineilsikt tnnikeeise lkeieskinq
      421 kvigqkhavs elikeiikvk lglnddskpl tsilligsng cgkttlidel skkiikdqns
      481 vlkldmsdyk eensisklig tnpgyvgysd ggiltnklkh sfetlilfen ienahnsiln
      541 lisrmlenge iidskedkil fkntiiimtt nvgsrmllge knigfnknqq tnaetktfke
      601 einqdlekrf klslldriqk kiilnvltkd nveeicsnyl ntlktkfysk gieieikkdi
      661 nkfittkyyk knsgarsvia aikekieeni itkiaenqni nkitiyleke eiiie
//
LOCUS       WP_235189449             545 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Williamsia sp. D3].
ACCESSION   WP_235189449
VERSION     WP_235189449.1
KEYWORDS    RefSeq.
SOURCE      Williamsia sp. D3
  ORGANISM  Williamsia sp. D3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Williamsia.
REFERENCE   1  (residues 1 to 545)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Williamsia sp. D3"
                     /db_xref="taxon:1313067"
     Protein         1..545
                     /product="AMP-binding protein"
                     /calculated_mol_wt=57808
     Region          8..535
                     /region_name="PRK07788"
                     /note="acyl-CoA synthetase; Validated"
                     /db_xref="CDD:236097"
ORIGIN      
        1 mrrrvsklnh vrtelaavre lrragampgv rqlpqvarlr raageaagpa iyaaihgsrv
       61 alidphgpvt yselaamcna vmnglgeilp gqdrptvgvm crnsrfavig llsgiglgar
      121 vvllntdlga kqmaevtare kvdvilhdae fagvlelvdq gvrryvawtd qaegepgpet
      181 ldhlisssst elprapqhqs slviltsgst gapkgaprdg avsmslpagf vskipirgsd
      241 tvlmsapafh gwgllatmvc lltgatvvmd rrfrapesls llvehrctam mvvptmlrrf
      301 mdldeeqlrr idhgrlrmia sggakldasl vlavaerfgp vlhnlygate asyvtiatpd
      361 dlaaepttag rpplgvevai irdgarvptg esgqifvrsg sqiskytngt sketlhgmln
      421 tgdtgrldaa grlfvegrsd gmiisggenv fpeevelalg khpdivdaav vavpdqdfgq
      481 rlrafvvprd gadvaaadvk tyigtelsrs rvprdvivvp dlprgaqgkv tkttldalae
      541 ehnta
//
LOCUS       WP_235189483             268 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Williamsia sp. D3].
ACCESSION   WP_235189483
VERSION     WP_235189483.1
KEYWORDS    RefSeq.
SOURCE      Williamsia sp. D3
  ORGANISM  Williamsia sp. D3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Williamsia.
REFERENCE   1  (residues 1 to 268)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016777.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04909.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Williamsia sp. D3"
                     /db_xref="taxon:1313067"
     Protein         1..268
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=29595
     Region          <107..262
                     /region_name="LigW"
                     /note="5-carboxyvanillate decarboxylase LigW (lignin
                     degradation), amidohydro domain [Carbohydrate transport
                     and metabolism]; COG2159"
                     /db_xref="CDD:441762"
ORIGIN      
        1 mvfglpvkkk wstaeplkps yylddnapch yhsltdvlvl dslatfdeap gftvaplicg
       61 fdptdrlavd hleavwarsd rwagigevll rhddltnltr getpvadhla mdnvfgfcad
      121 kkvpisvhhd sssagrpseq eyvepfenai rrhrttrivw chagvsrrvh pdgqielver
      181 llsrhhnltv elswvlldsv vhgdggvhpd wrtlickfad rivvgsdsva dpntisdrat
      241 qidqllralp gsvaqavatd tagelwfs
//
LOCUS       WP_235189503             172 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6764 family protein [Williamsia sp. D3].
ACCESSION   WP_235189503
VERSION     WP_235189503.1
KEYWORDS    RefSeq.
SOURCE      Williamsia sp. D3
  ORGANISM  Williamsia sp. D3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Williamsia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042829.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20550.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Williamsia sp. D3"
                     /db_xref="taxon:1313067"
     Protein         1..172
                     /product="DUF6764 family protein"
                     /calculated_mol_wt=15893
     Region          1..160
                     /region_name="DUF6764"
                     /note="Family of unknown function (DUF6764); pfam20550"
                     /db_xref="CDD:466699"
ORIGIN      
        1 mragvaglig taalalagla gaggasadpl tctaanghnv iradgygacg akagpgsfah
       61 aedhsrngta vassntggna naynlqpnts alsgavtggt gysittgpgg mavsqaragg
      121 tsiavagwgg taysgpygtt csgsfaaavd tstgqacigs ggiwlstprp as
//
LOCUS       WP_235189541             140 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6114 domain-containing protein [Williamsia].
ACCESSION   WP_235189541
VERSION     WP_235189541.1
KEYWORDS    RefSeq.
SOURCE      Williamsia
  ORGANISM  Williamsia
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae.
REFERENCE   1  (residues 1 to 140)
  AUTHORS   Wehmeier,U.F. and Piepersberg,W.
  TITLE     Enzymology of aminoglycoside biosynthesis-deduction from gene
            clusters
  JOURNAL   Methods Enzymol 459, 459-491 (2009)
   PUBMED   19362651
REFERENCE   2  (residues 1 to 140)
  AUTHORS   Unwin,J., Standage,S., Alexander,D., Hosted,T. Jr., Horan,A.C. and
            Wellington,E.M.
  TITLE     Gene cluster in Micromonospora echinospora ATCC15835 for the
            biosynthesis of the gentamicin C complex
  JOURNAL   J Antibiot (Tokyo) 57 (7), 436-445 (2004)
   PUBMED   15376556
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039352.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19609.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Williamsia"
                     /db_xref="taxon:85043"
     Protein         1..140
                     /product="DUF6114 domain-containing protein"
                     /calculated_mol_wt=14521
     Region          14..122
                     /region_name="DUF6114"
                     /note="Family of unknown function (DUF6114); pfam19609"
                     /db_xref="CDD:466126"
ORIGIN      
        1 mlttestqtr rarfrnwrtq rpfwgatlii lsglclllpa yttihvgdvl vtistisgvs
       61 tlllgalmll cgvasllrps vklpagvsam iialvalpaa nfggfiigtl lgiigaslvl
      121 awsdaprspv saesaadrha
//
LOCUS       WP_235189568             241 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Williamsia sp. D3].
ACCESSION   WP_235189568
VERSION     WP_235189568.1
KEYWORDS    RefSeq.
SOURCE      Williamsia sp. D3
  ORGANISM  Williamsia sp. D3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Williamsia.
REFERENCE   1  (residues 1 to 241)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Williamsia sp. D3"
                     /db_xref="taxon:1313067"
     Protein         1..241
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=25579
     Region          2..183
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
ORIGIN      
        1 mdaiivsgdl adagspeayr tlrkmlepta arlgatlcya mgnhddragf rigldlsrng
       61 stdlgapyda vhhigglriv vldsttpgrh dgsledvqld wlakvledra prgtllvmhh
      121 ppvrspvatv dflrltdpsa lesviagsdv rmilcghahy tgasaisgip vwigpplsyr
      181 tdpvppqgrh ragvgfgfsr idlfgesava tsvdvvgved vysepqsval erlwsltpna
      241 n
//
LOCUS       WP_235189589             303 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein [Williamsia sp. D3].
ACCESSION   WP_235189589
VERSION     WP_235189589.1
KEYWORDS    RefSeq.
SOURCE      Williamsia sp. D3
  ORGANISM  Williamsia sp. D3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Williamsia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Williamsia sp. D3"
                     /db_xref="taxon:1313067"
     Protein         1..303
                     /product="helicase-related protein"
                     /calculated_mol_wt=34257
     Region          <144..187
                     /region_name="Helicase_C"
                     /note="Helicase conserved C-terminal domain; pfam00271"
                     /db_xref="CDD:459740"
ORIGIN      
        1 mttggrwraa aivasglrsl fnrwesalil dnlygvdppy wqkvlsycad gnlqavldey
       61 lfhlvqvegn sefddealik fawhaagalk lkpavyrakd plqegndidf ssrfalrygv
      121 gtqnddsarp geireafnsp fwpfvlvsts vgqegidfhp wcsnlvhwnv pgnpvdfeqr
      181 dgrvnryrgh avrrniadkh apqilaaenp wleayrlaeq daphtdipgl apdwiypgph
      241 rvirdvmpyq lsvdtarlkr thervalyri afgqprqedl lellqsagvs dveadswrie
      301 lrp
//
LOCUS       WP_235189594             348 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6745 domain-containing protein [Williamsia sp. D3].
ACCESSION   WP_235189594
VERSION     WP_235189594.1
KEYWORDS    RefSeq.
SOURCE      Williamsia sp. D3
  ORGANISM  Williamsia sp. D3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Williamsia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042824.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20530.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Williamsia sp. D3"
                     /db_xref="taxon:1313067"
     Protein         1..348
                     /product="DUF6745 domain-containing protein"
                     /calculated_mol_wt=38709
     Region          130..341
                     /region_name="DUF6745"
                     /note="Domain of unknown function (DUF6745); pfam20530"
                     /db_xref="CDD:466679"
ORIGIN      
        1 maqlyrladr pepefvwvss ppagadliia dglassvpiv hgmrqsahsd vaavitrskg
       61 rmtaridphr rvrrfgwwqa pvpppdpnpa prararreir dslhtsisdg iaaairsltp
      121 piagyvtwyg qhevpwiahc vagpqlgltr yapedveild ihcalaeatg wwwpfdnvcv
      181 maerptalht eptpdaqfgq rrlhhdhepa mqfadrkaly vlhgtvvpew vmhdptveri
      241 arernvevrr caierlgwdv yiseagmtli dqaddpgnsd gtlslyatpp tvrrngrill
      301 vlngsrerdg trrryglpvp dgmssaldaa gwtygisgdd ysrlvrrt
//
LOCUS       WP_235189605             399 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein [Williamsia sp. D3].
ACCESSION   WP_235189605
VERSION     WP_235189605.1
KEYWORDS    RefSeq.
SOURCE      Williamsia sp. D3
  ORGANISM  Williamsia sp. D3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Williamsia.
REFERENCE   1  (residues 1 to 399)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Williamsia sp. D3"
                     /db_xref="taxon:1313067"
     Protein         1..399
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=44456
     Region          4..>289
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mttavnaflr rhdthlswfs iepddsvarr vidpttidfi phhhdvigdp deirelvqre
       61 tpgpfewdcf tfgtiehdcg ftmyaaidhl hsdpisqais lvdaialydn vrlgrdndla
      121 ppgsyidych rertasaqls ldsppvqrwi elvqanggrl ptfpldlgre stenarsahl
      181 tvplfdeqda ktlvricrds ragfiaailt vaglaaheft gdrrylaitp kstrttpaef
      241 savgwftsli pvpidiekss tfktlvrqaq vaylagrkls dvsfhrvlel vcdepdlgir
      301 tepgwsvsmv simdarrlpg vsefesinar fygnrgtsde vytwvnrfad etsmsllfpd
      361 taqarasvdi yvdrvrqifk tiisegdyap spgvrqvtg
//
LOCUS       WP_235189599             570 aa            linear   BCT 02-MAR-2025
DEFINITION  MGH1-like glycoside hydrolase domain-containing protein [Williamsia
            sp. D3].
ACCESSION   WP_235189599
VERSION     WP_235189599.1
KEYWORDS    RefSeq.
SOURCE      Williamsia sp. D3
  ORGANISM  Williamsia sp. D3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Williamsia.
REFERENCE   1  (residues 1 to 570)
  AUTHORS   Ndeh,D., Rogowski,A., Cartmell,A., Luis,A.S., Basle,A., Gray,J.,
            Venditto,I., Briggs,J., Zhang,X., Labourel,A., Terrapon,N.,
            Buffetto,F., Nepogodiev,S., Xiao,Y., Field,R.A., Zhu,Y.,
            O'Neil,M.A., Urbanowicz,B.R., York,W.S., Davies,G.J., Abbott,D.W.,
            Ralet,M.C., Martens,E.C., Henrissat,B. and Gilbert,H.J.
  TITLE     Complex pectin metabolism by gut bacteria reveals novel catalytic
            functions
  JOURNAL   Nature 544 (7648), 65-70 (2017)
   PUBMED   28329766
  REMARK    Erratum:[Nature. 2017 Aug 31;548(7669):612. doi:
            10.1038/nature23659.. PMID: 29411780]
REFERENCE   2  (residues 1 to 570)
  AUTHORS   Bianchetti,C.M., Elsen,N.L., Fox,B.G. and Phillips,G.N. Jr.
  TITLE     Structure of cellobiose phosphorylase from Clostridium thermocellum
            in complex with phosphate
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 67 (Pt 11),
            1345-1349 (2011)
   PUBMED   22102229
REFERENCE   3  (residues 1 to 570)
  AUTHORS   Kurakata,Y., Uechi,A., Yoshida,H., Kamitori,S., Sakano,Y.,
            Nishikawa,A. and Tonozuka,T.
  TITLE     Structural insights into the substrate specificity and function of
            Escherichia coli K12 YgjK, a glucosidase belonging to the glycoside
            hydrolase family 63
  JOURNAL   J Mol Biol 381 (1), 116-128 (2008)
   PUBMED   18586271
  REMARK    Erratum:[J Mol Biol. 2008 Nov 14;383(3):745]
REFERENCE   4  (residues 1 to 570)
  AUTHORS   Cui,Z., Maruyama,Y., Mikami,B., Hashimoto,W. and Murata,K.
  TITLE     Crystal structure of glycoside hydrolase family 78
            alpha-L-Rhamnosidase from Bacillus sp. GL1
  JOURNAL   J Mol Biol 374 (2), 384-398 (2007)
   PUBMED   17936784
REFERENCE   5  (residues 1 to 570)
  AUTHORS   Gibson,R.P., Gloster,T.M., Roberts,S., Warren,R.A., Storch de
            Gracia,I., Garcia,A., Chiara,J.L. and Davies,G.J.
  TITLE     Molecular basis for trehalase inhibition revealed by the structure
            of trehalase in complex with potent inhibitors
  JOURNAL   Angew Chem Int Ed Engl 46 (22), 4115-4119 (2007)
   PUBMED   17455176
REFERENCE   6  (residues 1 to 570)
  AUTHORS   Hidaka,M., Honda,Y., Kitaoka,M., Nirasawa,S., Hayashi,K.,
            Wakagi,T., Shoun,H. and Fushinobu,S.
  TITLE     Chitobiose phosphorylase from Vibrio proteolyticus, a member of
            glycosyl transferase family 36, has a clan GH-L-like
            (alpha/alpha)(6) barrel fold
  JOURNAL   Structure 12 (6), 937-947 (2004)
   PUBMED   15274915
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046269.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22422.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Williamsia sp. D3"
                     /db_xref="taxon:1313067"
     Protein         1..570
                     /product="MGH1-like glycoside hydrolase domain-containing
                     protein"
                     /calculated_mol_wt=63739
     Region          121..563
                     /region_name="GDB1"
                     /note="Glycogen debranching enzyme (alpha-1,6-glucosidase)
                     [Carbohydrate transport and metabolism]; COG3408"
                     /db_xref="CDD:442634"
ORIGIN      
        1 maagktvhar vrlsgrddag csdsdwagdd fgriaalrqs eadefyaaig pdldteqmri
       61 ltqaaagliw skqmysyqva rwldgdpaep lpppghqhgr ntdwrhldaf dilampdpwe
      121 ypwfaawdla fhsiswahld pafakyqliv llrewflhpn galpayewsf ddvnppvhal
      181 aalrvfnidg stdteflerv fqklllnftw wvnrqdphgn nvfgggflgl dnispvdrsh
      241 lppgttleqs dgtgwmafya eamlgialal adhdpvyedm vikflehftl iaqslkesgl
      301 ydvedgfyyd rltdpdgtce sikvqslvgl ipalaaaeip arnaqrmsrl rnrftrrfaa
      361 lgiggaqswr irsdgdkpri llsvlsadql rslmrtvfde damlsdhglr slskkyrepy
      421 tlpgatgavi dyepaesrta myggnsnwrg pvwfpinyla iralvqygrf fgtevtmayp
      481 tgadadsdff eiaqdladrl vsiwlpdadg rrpvyggtei fqtdpawkdn llfneyfhgd
      541 ngaglgashq tgwtalvidl llhppkhsrh
//
LOCUS       WP_235189661             303 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Williamsia sp. D3].
ACCESSION   WP_235189661
VERSION     WP_235189661.1
KEYWORDS    RefSeq.
SOURCE      Williamsia sp. D3
  ORGANISM  Williamsia sp. D3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Williamsia.
REFERENCE   1  (residues 1 to 303)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 303)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 303)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 303)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Williamsia sp. D3"
                     /db_xref="taxon:1313067"
     Protein         1..303
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=31239
     Region          6..300
                     /region_name="drrA"
                     /note="daunorubicin resistance ABC transporter ATP-binding
                     subunit; TIGR01188"
                     /db_xref="CDD:130256"
ORIGIN      
        1 msqlikrfgd vlavdhvdld vpagtvlall gpngagkttv vrmistlikp tsgsitvagi
       61 dgvsnphdar srmgvsgqnv avddmltgle qltmvarlag fnraaakrra aelldqfdia
      121 hagkrrvgsy sggtrrrldl agaivakppv vildeptagl dpvsrtvlwk avrdltndgt
      181 svllttqyle eadqladqvt vllrgkvaar gtpdelkqsv gssvvrltla dvgaadravg
      241 vmasagvtda vvdggvvsfs aqegssamat miatltgegv aivdasvqtp tlddvfvslt
      301 eer
//
LOCUS       WP_235189680             133 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Williamsia sp. D3].
ACCESSION   WP_235189680
VERSION     WP_235189680.1
KEYWORDS    RefSeq.
SOURCE      Williamsia sp. D3
  ORGANISM  Williamsia sp. D3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Williamsia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00528.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Williamsia sp. D3"
                     /db_xref="taxon:1313067"
     Protein         1..133
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=14535
     Region          <1..114
                     /region_name="HisM"
                     /note="ABC-type amino acid transport system, permease
                     component [Amino acid transport and metabolism]; COG0765"
                     /db_xref="CDD:440528"
ORIGIN      
        1 maeilrsall svddgqhiaa ralglpphkv lfkvvlpqai kvaippsgne fiamlkytsl
       61 asvislrell ttaqaevsvt fryaeyysaa lvyylvivsv amviqyfiea ryrwiskghn
      121 tsgitptvqk vpv
//
LOCUS       WP_235189687             131 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4145 domain-containing protein [Williamsia sp. D3].
ACCESSION   WP_235189687
VERSION     WP_235189687.1
KEYWORDS    RefSeq.
SOURCE      Williamsia sp. D3
  ORGANISM  Williamsia sp. D3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Williamsia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025027.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13643.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Williamsia sp. D3"
                     /db_xref="taxon:1313067"
     Protein         1..131
                     /product="DUF4145 domain-containing protein"
                     /calculated_mol_wt=14229
     Region          10..102
                     /region_name="DUF4145"
                     /note="Domain of unknown function (DUF4145); pfam13643"
                     /db_xref="CDD:433374"
ORIGIN      
        1 mdenvagays eavrclgvqa phaaaamlrt alahivedkg seaakskktl ydrieqmvid
       61 ktlwesfgvw athirktgna gahaekfepi tmgqaselqr fvrqliefly lvpgrlakam
      121 ppipkaantn p
//
LOCUS       WP_235189694              88 aa            linear   BCT 02-MAR-2025
DEFINITION  translation initiation factor IF-2 N-terminal domain-containing
            protein, partial [Williamsia sp. D3].
ACCESSION   WP_235189694
VERSION     WP_235189694.1
KEYWORDS    RefSeq.
SOURCE      Williamsia sp. D3
  ORGANISM  Williamsia sp. D3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Williamsia.
REFERENCE   1  (residues 1 to 88)
  AUTHORS   Laursen,B.S., Mortensen,K.K., Sperling-Petersen,H.U. and
            Hoffman,D.W.
  TITLE     A conserved structural motif at the N terminus of bacterial
            translation initiation factor IF2
  JOURNAL   J Biol Chem 278 (18), 16320-16328 (2003)
   PUBMED   12600987
REFERENCE   2  (residues 1 to 88)
  AUTHORS   Nyengaard,N.R., Mortensen,K.K., Lassen,S.F., Hershey,J.W. and
            Sperling-Petersen,H.U.
  TITLE     Tandem translation of E. coli initiation factor IF2 beta:
            purification and characterization in vitro of two active forms
  JOURNAL   Biochem Biophys Res Commun 181 (3), 1572-1579 (1991)
   PUBMED   1764105
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016635.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04760.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Williamsia sp. D3"
                     /db_xref="taxon:1313067"
     Protein         1..>88
                     /product="translation initiation factor IF-2 N-terminal
                     domain-containing protein"
     Region          3..51
                     /region_name="IF2_N"
                     /note="Translation initiation factor IF-2, N-terminal
                     region; pfam04760"
                     /db_xref="CDD:428110"
ORIGIN      
        1 magkarvhel akelgvtske vlarlseqge fvksasstve apvarrlrqs fpgkdapaan
       61 ggapsskrrr qrpgsktiss qagcrahp
//
LOCUS       WP_235189708            1076 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Methylotenera sp.
            L2L1].
ACCESSION   WP_235189708
VERSION     WP_235189708.1
KEYWORDS    RefSeq.
SOURCE      Methylotenera sp. L2L1
  ORGANISM  Methylotenera sp. L2L1
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Nitrosomonadales; Methylophilaceae; Methylotenera.
REFERENCE   1  (residues 1 to 1076)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 1076)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 1076)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 1076)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 1076)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 1076)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 1076)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 1076)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 1076)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Methylotenera sp. L2L1"
                     /db_xref="taxon:1502770"
     Protein         1..1076
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=120463
     Region          <8..>325
                     /region_name="GAF"
                     /note="GAF domain [Signal transduction mechanisms];
                     COG2203"
                     /db_xref="CDD:441805"
     Region          172..442
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          <408..1005
                     /region_name="GAF"
                     /note="GAF domain [Signal transduction mechanisms];
                     COG2203"
                     /db_xref="CDD:441805"
     Region          768..>1075
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mispkvtide ltrlqtltdy qildsapeev fdnltklase icgtpislit fvdssrqwfk
       61 ssyglastet srdvsfcgha ilddalfevr dahqderfkd nplvtsdphi rfyagfplta
      121 nngsklgtlc vidnvprkld qsqrtslkri akqvmseleh rkvlletadi skklanstif
      181 ydallnsade siisttpdgv itsfnqgaek mlgyrademv gkstpeifhe htevieyakt
      241 lshefgetie pgfevfvlra krgycdsrrw tyirkdglki tvnlsvtali ddsgvllgym
      301 gvarditsei etqnslrnlt sileitgema kvggwqldlh nnqikwtkev fkiheldtma
      361 pppleqaiaf ypsearatil aavkdsidng stwdlelpfi taknkplwvr sqgspvmvdg
      421 rvvkligalq ditsrkkfel dlawlnrall mlskanhait qindekrlmi eicriavemg
      481 gygmawvgya ehdesksisp qaffgdsgks yletinlswa ddgsthqgpa gkvirtgkpy
      541 vaedllldes fhfkvlakqh gyrglvvlpl kdrqetigml alystevrrf sdgevellqe
      601 ltdnlgtgis niraerqrqr lsdamikvai tvtssissdf fkklvasmte tlgadagyia
      661 qlqsrkplka smlavsvgqe fkenfeydvp davaktffgd sdliiiknha dkdfpnlslm
      721 rfhpfhafag lclydskgnd igllfvffkq aiqaqsedli ksilkifaar taselerlnd
      781 dliiqeqasl ldrtndaivi hdmnlmvkyw nkgaealygw sseeivnhpi hkllhqdqni
      841 lknalevlle kgewkgevte rhkggnklii eshwtlmrda ngkpksifsi nsditmrina
      901 eeevrklafy daltalpnrr llldrieqal ssarrkaqfg avvfidldnf kqlndtlghd
      961 kgdallqeva qrlkkcvrdh dtvarlggde fvilvedlsv eleqaksyve aigqkilqal
     1021 nntfdfdgyl htstpsmgva ifskhtnsvd evlkqadiam yqsknagrnr ltffsg
//
LOCUS       WP_235189860             401 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Porticoccus hydrocarbonoclasticus].
ACCESSION   WP_235189860
VERSION     WP_235189860.1
KEYWORDS    RefSeq.
SOURCE      Porticoccus hydrocarbonoclasticus
  ORGANISM  Porticoccus hydrocarbonoclasticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cellvibrionales; Porticoccaceae; Porticoccus.
REFERENCE   1  (residues 1 to 401)
  AUTHORS   Todone,F., Vanoni,M.A., Mozzarelli,A., Bolognesi,M., Coda,A.,
            Curti,B. and Mattevi,A.
  TITLE     Active site plasticity in D-amino acid oxidase: a crystallographic
            analysis
  JOURNAL   Biochemistry 36 (19), 5853-5860 (1997)
   PUBMED   9153426
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013434.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01266.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Porticoccus hydrocarbonoclasticus"
                     /db_xref="taxon:1073414"
     Protein         1..401
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=44261
     Region          59..>395
                     /region_name="GlpA"
                     /note="Glycerol-3-phosphate dehydrogenase [Energy
                     production and conversion]; COG0578"
                     /db_xref="CDD:440343"
ORIGIN      
        1 madnnpseph pgnqfdvvvi gggimgagvv qaaqaagyhc lvleknswgs gtssksskli
       61 hgglrylqsw efslvreslr ertrllslap qlvygnwfyi plyegsrlrs wqlragltly
      121 wllsgcrtda rfnvvppaew pelaglkttg lkkvyryrda qtddakltsa viqsaeslga
      181 evgspaevia aestpegyrv lmktasrera vhcrflvnaa gpwanqmarr itpepghldm
      241 dlvqgthlll drkisdrcfy lespsdgrav fvlpwynttl lgttetgfdg dpdqvlptaa
      301 erdyllgilk hyfpdydgrv cgemaglrvl pkaaegfhhr srevefvens hylaiyggkl
      361 tgyrataekv lkriqkklgp asagrrgdtr rlplppakeq s
//
LOCUS       WP_235189861             262 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase domain-containing protein [Porticoccus
            hydrocarbonoclasticus].
ACCESSION   WP_235189861
VERSION     WP_235189861.1
KEYWORDS    RefSeq.
SOURCE      Porticoccus hydrocarbonoclasticus
  ORGANISM  Porticoccus hydrocarbonoclasticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cellvibrionales; Porticoccaceae; Porticoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019846.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08241.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Porticoccus hydrocarbonoclasticus"
                     /db_xref="taxon:1073414"
     Protein         1..262
                     /product="methyltransferase domain-containing protein"
                     /GO_function="GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /calculated_mol_wt=29679
     Region          2..251
                     /region_name="PRK11036"
                     /note="tRNA uridine 5-oxyacetic acid(34) methyltransferase
                     CmoM"
                     /db_xref="CDD:182918"
ORIGIN      
        1 miqdrnfddl aerfqrkvyg glkgeirlav lwrdleqylp qihgaepltv ldvgaglgql
       61 airlaslghr vvvndvsaem lsvaqvaarq agvyeqitwh hcpfqalveq qpgrfdlvlc
      121 havvewlarp elllpqlqgf lapegclsft yynrhsfeyr nllrgnfnll krdrfvpdtg
      181 sltpvnslyp eqvkqwvnda glaemaatgv rvfhdyvtnp rggntvteav iemelaysrr
      241 dpyrwlgryi hlllahgrqr ac
//
LOCUS       WP_235189931             858 aa            linear   BCT 02-MAR-2025
DEFINITION  CshA/CshB family fibrillar adhesin-related protein
            [Stenotrophomonas sp. RIT309].
ACCESSION   WP_235189931
VERSION     WP_235189931.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas sp. RIT309
  ORGANISM  Stenotrophomonas sp. RIT309
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (residues 1 to 858)
  AUTHORS   Back,C.R., Sztukowska,M.N., Till,M., Lamont,R.J., Jenkinson,H.F.,
            Nobbs,A.H. and Race,P.R.
  TITLE     The Streptococcus gordonii Adhesin CshA Protein Binds Host
            Fibronectin via a Catch-Clamp Mechanism
  JOURNAL   J Biol Chem 292 (5), 1538-1549 (2017)
   PUBMED   27920201
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037482.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18651.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..858
                     /organism="Stenotrophomonas sp. RIT309"
                     /db_xref="taxon:1470590"
     Protein         1..858
                     /product="CshA/CshB family fibrillar adhesin-related
                     protein"
                     /calculated_mol_wt=88566
     Region          67..339
                     /region_name="CshA_NR2"
                     /note="Surface adhesin CshA non-repetitive domain 2;
                     pfam18651"
                     /db_xref="CDD:436648"
     Region          392..466
                     /region_name="GEVED"
                     /note="GEVED domain; pfam20009"
                     /db_xref="CDD:466256"
     Region          638..723
                     /region_name="RrgB_K2N_iso_D2"
                     /note="fimbrial isopeptide formation D2 domain; TIGR04226"
                     /db_xref="CDD:275067"
ORIGIN      
        1 mwqsttsris aggesvhpek sahpgrtgrw laagllllll svvlpssawa aayatggtsp
       61 yrntvlwltw gggtdlgtag vtlnngdtss ismpvaagin lsvscslani sgggllqsyr
      121 pgnfsgdsld dlynvggtgg anqliagisr stgtssfein cvstlggapy rlrgvvmada
      181 esinnsgefv easalgtwnv vemrknlsag aynvtksssg gnsvirfgpg ndnntaavtf
      241 lnfdnaahap gnlavnmgfs mrgggttaia igllvpyadf gdapqsygda mhvvddlqfr
      301 pdglpvnatp tnintagytp gglappltdf lgtmgpdteq kssysadakg ddnfpsgnpn
      361 eenawpasyv ltvmqagtqi sqpvacvgsg svagwidfnr ngtfdpgers niaacsggga
      421 nlswtvpaqv sagssyvrlr yatnaaqiqq ptgvaddgev edhlititap alkvvksnna
      481 tggiwnygqa gtqytltisn ttnvptgnpp nvpagvitvr dqlpagivpn wtgtlssgsw
      541 sctasgqavs ctssqvlsaa gtagdsssft lpvtvsasas gllrnhasvg ggydpfnggn
      601 ppapgeactd anhctrsdvt vpvtrvsyak rsniagpvav gatvsytvdv tiadgnsrdv
      661 ltltdtlgtg ldfasvtnag gftcnaanpl vctlpagtvp gtysltyaat vnaqasgqvv
      721 ntvvgtgtds hlqqqlhhhh agggaahlgv qgkhygrpgr sgrqrclhge rgrgrcahhr
      781 crhidrypgh wpglrqhdqc rrlhlrarqs agvhaarrhr arqlrvllyr rrqrtggwpg
      841 aqcrsaersg qsvvrrql
//
LOCUS       WP_235190041             109 aa            linear   BCT 02-MAR-2025
DEFINITION  dUTP diphosphatase [Bacillus gaemokensis].
ACCESSION   WP_235190041
VERSION     WP_235190041.1
KEYWORDS    RefSeq.
SOURCE      Bacillus gaemokensis
  ORGANISM  Bacillus gaemokensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 109)
  AUTHORS   Moroz,O.V., Harkiolaki,M., Galperin,M.Y., Vagin,A.A.,
            Gonzalez-Pacanowska,D. and Wilson,K.S.
  TITLE     The crystal structure of a complex of Campylobacter jejuni dUTPase
            with substrate analogue sheds light on the mechanism and suggests
            the 'basic module' for dimeric d(C/U)TPases
  JOURNAL   J Mol Biol 342 (5), 1583-1597 (2004)
   PUBMED   15364583
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020341.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08761.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Bacillus gaemokensis"
                     /db_xref="taxon:574375"
     Protein         1..109
                     /product="dUTP diphosphatase"
                     /EC_number="3.6.1.23"
                     /calculated_mol_wt=12312
     Region          <1..95
                     /region_name="Dut2"
                     /note="Dimeric dUTPase, all-alpha-NTP-PPase (MazG)
                     superfamily [Nucleotide transport and metabolism];
                     COG4508"
                     /db_xref="CDD:443588"
ORIGIN      
        1 mhfvtslgnk yghvdlilgs drhfrlaskf lasgigshel fkymykadys cifhyakalg
       61 aliaigyklg msqqdmmdsy faknkvnyer lssgyeynln fikkgmlds
//
LOCUS       WP_235190057             319 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Bacillus gaemokensis].
ACCESSION   WP_235190057
VERSION     WP_235190057.1
KEYWORDS    RefSeq.
SOURCE      Bacillus gaemokensis
  ORGANISM  Bacillus gaemokensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024870.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13479.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Bacillus gaemokensis"
                     /db_xref="taxon:574375"
     Protein         1..319
                     /product="AAA family ATPase"
                     /calculated_mol_wt=35672
     Region          11..>141
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 mfrkpstkql glkvlamgqk gsgksvfals fprvfaidae tgmafyedhp qfgqnlegvl
       61 ntqnfnevqe aidevmdmgv eevgslvids etkiyqnltd aslqveekra rkngkdvnds
      121 svsmrgygri klvatrlqnl kidlsakgvn iisisqiddi kqkvgenfvk igekpvmqkn
      181 seydydivik qftektptge eiykgeilkd rtgvtkvgqi vdnpsydiwk kfiesrkgad
      241 kiksnlaqds dkakkaleee daeaektvvd kfrevmqkde akkkapelik qygiknplap
      301 anakelqdls kiveelekl
//
LOCUS       WP_235190164             656 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase domain-containing protein, partial [Bacillus
            gaemokensis].
ACCESSION   WP_235190164
VERSION     WP_235190164.1
KEYWORDS    RefSeq.
SOURCE      Bacillus gaemokensis
  ORGANISM  Bacillus gaemokensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 656)
  AUTHORS   Dang,G., Chen,L., Li,Z., Deng,X., Cui,Y., Cao,J., Yu,S., Pang,H.
            and Liu,S.
  TITLE     Expression, Purification and Characterisation of Secreted Esterase
            Rv2525c from Mycobacterium tuberculosis
  JOURNAL   Appl Biochem Biotechnol 176 (1), 1-12 (2015)
   PUBMED   25869294
REFERENCE   2  (residues 1 to 656)
  AUTHORS   Bellinzoni,M., Haouz,A., Miras,I., Magnet,S., Andre-Leroux,G.,
            Mukherjee,R., Shepard,W., Cole,S.T. and Alzari,P.M.
  TITLE     Structural studies suggest a peptidoglycan hydrolase function for
            the Mycobacterium tuberculosis Tat-secreted protein Rv2525c
  JOURNAL   J Struct Biol 188 (2), 156-164 (2014)
   PUBMED   25260828
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08924.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Bacillus gaemokensis"
                     /db_xref="taxon:574375"
     Protein         <1..>656
                     /product="glycoside hydrolase domain-containing protein"
     Region          14..67
                     /region_name="PG_binding_1"
                     /note="Putative peptidoglycan binding domain; pfam01471"
                     /db_xref="CDD:460223"
     Region          148..210
                     /region_name="PGRP"
                     /note="Peptidoglycan-binding (PGRP) domain of
                     peptidoglycan hydrolases [Cell wall/membrane/envelope
                     biogenesis]; COG3409"
                     /db_xref="CDD:442635"
     Region          209..420
                     /region_name="GH25_BacA-like"
                     /note="BacA is a bacterial lysin from Enterococcus
                     faecalis that degrades bacterial cell walls by catalyzing
                     the hydrolysis of 1,4-beta-linkages between
                     N-acetylmuramic acid and N-acetyl-D-glucosamine residues.
                     BacA is homologous to the YbfG and YkuG lysins of...;
                     cd06418"
                     /db_xref="CDD:119380"
     Site            order(224,248,280,282,321,323,358,377,398,417)
                     /site_type="active"
                     /db_xref="CDD:119380"
ORIGIN      
        1 cpisttsntn anivkiiqaa lyckgygpgg itgtyapgtq saiasmqkdl gctpndgavt
       61 pkllkalltm dayvlvnngs akirsiqqwl nskyikradf fympcdghys rdvqkalmfa
      121 iqyeeglqdg tangnfgptt qdkiksvvlk egstgafvyl fqaslifngy dvpfdgkfst
      181 avttqlkqfq nfsllkatgv sdyqtwasll vstgdperqg kacdciteit peraktlvaa
      241 gyetvgrylt nakvknaknk kiqggemhni fraglsifpi yqtnggdkny fnasqgkgda
      301 idafqaalny gfpygttiyf avdfdatgdd iknkilphfk aineqmkelg syykigvygs
      361 rnvciqvsdq kyatysfvsg mstgfsgnlg fplpknwafd qikeyaigsg ngsiaidkdi
      421 ksgrdsgyki sekefnqyec ivvsakegpe rgfrynfiep aikkirdlkq kydnhkthvt
      481 wiiernlysn eeifnfgeta thwsvdvvfv dnkdqlinyi ntqstngtgk rlnkiidfsw
      541 fghghrgyld fgaqyqadak ykghfhkedi qrlqtdafap gniadsyacn tgtnvegisf
      601 aqlwanktkg imtacadgqt vynyitvcak tspiqwlkeh daadknrart gyseyg
//
LOCUS       WP_235190167            1055 aa            linear   BCT 02-MAR-2025
DEFINITION  2Fe-2S iron-sulfur cluster-binding protein [Sulfitobacter
            mediterraneus].
ACCESSION   WP_235190167
VERSION     WP_235190167.1
KEYWORDS    RefSeq.
SOURCE      Sulfitobacter mediterraneus
  ORGANISM  Sulfitobacter mediterraneus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Sulfitobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012339.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00111.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Sulfitobacter mediterraneus"
                     /db_xref="taxon:83219"
     Protein         1..1055
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /GO_function="GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /calculated_mol_wt=114272
     Region          67..>255
                     /region_name="Dehalogenase"
                     /note="Reductive dehalogenase subunit; cl46879"
                     /db_xref="CDD:481219"
     Region          386..604
                     /region_name="Dehalogenase"
                     /note="Reductive dehalogenase subunit; cl46879"
                     /db_xref="CDD:481219"
     Region          748..959
                     /region_name="PDR_like"
                     /note="Phthalate dioxygenase reductase (PDR) is an
                     FMN-dependent reductase that mediates electron transfer
                     from NADH to FMN to an iron sulfur cluster. PDR has an an
                     N-terminal ferrredoxin reductase (FNR)-like NAD(H) binding
                     domain and a C-terminal iron-sulfur...; cd06185"
                     /db_xref="CDD:99782"
     Site            order(789..790,792,806..808,814,816..817,858,958)
                     /site_type="other"
                     /note="FMN-binding pocket [chemical binding]"
                     /db_xref="CDD:99782"
     Site            order(789,791..792)
                     /site_type="active"
                     /note="flavin binding motif [active]"
                     /db_xref="CDD:99782"
     Site            order(814,817,820,827)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99782"
     Site            order(850,854..857,859)
                     /site_type="other"
                     /note="beta-alpha-beta structure motif"
                     /db_xref="CDD:99782"
     Site            order(855..856,879..881,931..932)
                     /site_type="other"
                     /note="NAD binding pocket [chemical binding]"
                     /db_xref="CDD:99782"
     Region          975..1055
                     /region_name="Fdx"
                     /note="Ferredoxin [Energy production and conversion];
                     COG0633"
                     /db_xref="CDD:440398"
ORIGIN      
        1 mgtyplerlr rlsapltqlp dlpfptlsfd rpedpasivn amgpfqammd vvrsgkvnpa
       61 raaipddpla rsqhlksfgy yndasmigic alpdaarlar prhnpatdal ardlrerqtk
      121 tlaagvdvim anlrdaaeap aqplgdhrha mviltafprd pnadepgsdw imdaqaerac
      181 lrasenatvl aeyirqlgfd arvhsattsd vhlgklaiaa glavweggtl qapwigdrfg
      241 lavvttdmsl addlplaplr eqpwaalkgp hwqfgthggt sardhdpyan rgyaqgphpf
      301 etlkrvddpt tyidaanvpr vpkradlfar gqfgdmgpkv qnamkgghhv vksapaaaqr
      361 rllgalillq dgavhpdpaq hdatrnaanl kaasyflgad aagisacpdw twyshdatgt
      421 pidpphdqsl smiidqgfdt megssgddwi avsqsmrayl rfsmlggvla qhlrnlgyps
      481 kahtvmdgdv lqppllllag mgevsrigev ilnpflgprl ksgvvtttlp vthdkpidfg
      541 lqkfceacnk carecpsgai tagpkkmfng yeiwksdsqk catyritnqg gamcgrcmkt
      601 cpwnleglfa eapfrwaath ipqaapmlak lddkvgrgrl npvkkwwwdv elqddgsydt
      661 paapvnardl qtdldlkfed qtlavypapl aahpwpypdp mnreagikah aelitadehr
      721 aksargetdh lhlydvgsda pvldlrivna ekmsdgvtly dfahpeghdl pewtagahld
      781 lvvapeflrp ysllgdpadr sryriavlre dqgrggsall hrvftkgrrv fvskpvnhfg
      841 lvedaaktll mgggigvtpm iafahrlhtl gkpfalhyss strasaafla flsqmpwkdr
      901 vhlhlsdegs ranlpalmsa lpagshvytc gpdaymqsvm daaeaagvpe darhleyfst
      961 pelpeyvntp ftlrlstgrd iavaadqsas daliaagvpv dikcsdgicg vckcgvssge
     1021 vehrdfvlsa kqretsmilc qsraaqegat leidl
//
LOCUS       WP_235190185             204 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Sulfitobacter mediterraneus].
ACCESSION   WP_235190185
VERSION     WP_235190185.1
KEYWORDS    RefSeq.
SOURCE      Sulfitobacter mediterraneus
  ORGANISM  Sulfitobacter mediterraneus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Sulfitobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024635.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13238.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Sulfitobacter mediterraneus"
                     /db_xref="taxon:83219"
     Protein         1..204
                     /product="AAA family ATPase"
                     /calculated_mol_wt=22033
     Region          14..204
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Site            order(29,34..37)
                     /site_type="active"
                     /db_xref="CDD:238977"
ORIGIN      
        1 mtpqgiadla iqiaaqndgk srrmiaiaga pgsgkstive tlrnripqsa ivpmdgfhld
       61 ndtltakgrl hrkgapdtfd taemlrvlrk vaaggavsvp ifdrtadavv pdgaliapea
      121 qiilvegnyl lldapgwrem hkiwdltvll dvpeaelqrr lvqrwtdhdl plqqaqdraa
      181 sndlpnaqtv maqsiepdir vqsa
//
LOCUS       WP_235190189             246 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4344 domain-containing metallopeptidase [Sulfitobacter
            mediterraneus].
ACCESSION   WP_235190189
VERSION     WP_235190189.1
KEYWORDS    RefSeq.
SOURCE      Sulfitobacter mediterraneus
  ORGANISM  Sulfitobacter mediterraneus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Sulfitobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025606.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14247.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Sulfitobacter mediterraneus"
                     /db_xref="taxon:83219"
     Protein         1..246
                     /product="DUF4344 domain-containing metallopeptidase"
                     /calculated_mol_wt=26503
     Region          <17..159
                     /region_name="DUF4344"
                     /note="Putative metallopeptidase; pfam14247"
                     /db_xref="CDD:433808"
     Region          193..>244
                     /region_name="DUF4344"
                     /note="Putative metallopeptidase; pfam14247"
                     /db_xref="CDD:433808"
ORIGIN      
        1 miwlrgfslf aamalngpaa aqspeeaqay veanlisify helghalidv malpvfgqee
       61 daadtasill idalfeedta qsiardaafg fldeaaateg eeplwwdvhg pdlqrhynlv
      121 clfygadpdl radiaadldl pqdraescae efdlalaswg pvldditqng ggaslvfeda
      181 gasplqdvia tevaalndll tlpypvtira epcgeanafy dpadqtitmc leleshlfer
      241 avqnie
//
LOCUS       WP_235190074             145 aa            linear   BCT 02-MAR-2025
DEFINITION  outer membrane protein assembly factor BamE domain-containing
            protein [Bacillus gaemokensis].
ACCESSION   WP_235190074
VERSION     WP_235190074.1
KEYWORDS    RefSeq.
SOURCE      Bacillus gaemokensis
  ORGANISM  Bacillus gaemokensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 145)
  AUTHORS   Ochsner,U.A., Vasil,A.I., Johnson,Z. and Vasil,M.L.
  TITLE     Pseudomonas aeruginosa fur overlaps with a gene encoding a novel
            outer membrane lipoprotein, OmlA
  JOURNAL   J Bacteriol 181 (4), 1099-1109 (1999)
   PUBMED   9973334
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016258.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04355.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Bacillus gaemokensis"
                     /db_xref="taxon:574375"
     gene            1..145
                     /gene="bamE"
     Protein         1..145
                     /product="outer membrane protein assembly factor BamE
                     domain-containing protein"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /calculated_mol_wt=17062
     Region          71..137
                     /region_name="SmpA_OmlA"
                     /note="SmpA / OmlA family; cl46449"
                     /db_xref="CDD:480789"
ORIGIN      
        1 mlpfivllli qwviwkisln knnekhkrel kiitgvgmsl flccavqlgi neynskfhrd
       61 awleeeskrv yivddllekh klvgkskeev lqllgnptet grfketnqii yylgdergfi
      121 ridserlvly fndndkvmky kiqkd
//
LOCUS       WP_235190296             460 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: transporter substrate-binding domain-containing
            protein [unclassified Pseudoalteromonas].
ACCESSION   WP_235190296
VERSION     WP_235190296.1
KEYWORDS    RefSeq.
SOURCE      unclassified Pseudoalteromonas
  ORGANISM  unclassified Pseudoalteromonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE   1  (residues 1 to 460)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="unclassified Pseudoalteromonas"
                     /db_xref="taxon:194690"
     Protein         1..460
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=52057
     Region          297..>460
                     /region_name="PBP2_BvgS_HisK_like"
                     /note="The type 2 periplasmic ligand-binding protein
                     domain of the sensor-kinase BvgS and histidine kinase
                     receptors, and related proteins; cd01007"
                     /db_xref="CDD:270228"
ORIGIN      
        1 mifkalkklt ktvrfsirlt vvavfvlats itaiiatslq yyfsekmale snvqhfnmtt
       61 qsvadyltri neksentlym mvkntslvge nlsdktelrn vlsemmdlnp lfyafymgyn
      121 ngdffevinl essamvrqrl gakdndrwvv iqikseegqr iqqtlyfdas fslrektkkp
      181 tyfdpreqaw fkqansqqvn ktkpylfthl qtsgqtysik iagknhvlgl giivdnmsny
      241 lieqqqrlem hsstqlliyn regeiiasnq pfsstvearl nrlildeqqq kivakyptit
      301 vsnetnwapm dfsvsgkpkg ysveyinait ellgikvnyi nglswqelln lfenkqidvi
      361 hpvlntasnn algmlstpmv slplsivnqq nnppithmqq lagksvavge gwsivkilra
      421 qfpeinlvev pntkallmhi angdtyagid skavlqyiqq
//
LOCUS       WP_235190386             273 aa            linear   BCT 02-MAR-2025
DEFINITION  YDG domain-containing protein [Lysinibacillus sp. BF-4].
ACCESSION   WP_235190386
VERSION     WP_235190386.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus sp. BF-4
  ORGANISM  Lysinibacillus sp. BF-4
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037374.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18657.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Lysinibacillus sp. BF-4"
                     /db_xref="taxon:1473546"
     Protein         1..273
                     /product="YDG domain-containing protein"
                     /calculated_mol_wt=26712
     Region          17..84
                     /region_name="YDG"
                     /note="YDG domain; pfam18657"
                     /db_xref="CDD:436651"
     Region          92..170
                     /region_name="YDG"
                     /note="YDG domain; pfam18657"
                     /db_xref="CDD:436651"
ORIGIN      
        1 mwedensglt iaaptfnatk vydgantvat vaageltgva egdivtvnat atydnadvgn
       61 gktitvsytl sgadagkysa paptllttge itakaltiav pavaskeydg tttatvtaga
      121 ltgvvgsdtv tvsatgtfad anvgagktva vaytlagaqa gnytlandta taditaiaiv
      181 gaelgltapv igeapvtssi tgtgytgtvn wtgtldgdgk fqsgqvytat vtltpatgyt
      241 ltgllensft ntsggtvtna vdsatvtvtf ttl
//
LOCUS       WP_235190396              27 aa            linear   BCT 02-MAR-2025
DEFINITION  winged helix-turn-helix domain-containing protein, partial
            [Lysinibacillus sp. BF-4].
ACCESSION   WP_235190396
VERSION     WP_235190396.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus sp. BF-4
  ORGANISM  Lysinibacillus sp. BF-4
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 27)
  AUTHORS   Wietzorrek,A. and Bibb,M.
  TITLE     A novel family of proteins that regulates antibiotic production in
            streptomycetes appears to contain an OmpR-like DNA-binding fold
  JOURNAL   Mol Microbiol 25 (6), 1181-1184 (1997)
   PUBMED   9350875
REFERENCE   2  (residues 1 to 27)
  AUTHORS   Martinez-Hackert,E. and Stock,A.M.
  TITLE     The DNA-binding domain of OmpR: crystal structures of a winged
            helix transcription factor
  JOURNAL   Structure 5 (1), 109-124 (1997)
   PUBMED   9016718
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012698.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00486.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..27
                     /organism="Lysinibacillus sp. BF-4"
                     /db_xref="taxon:1473546"
     Protein         1..>27
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
     Region          <1..>27
                     /region_name="HTH_ARSR"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; cl46857"
                     /db_xref="CDD:481197"
ORIGIN      
        1 mqylcenagq vlskeqmynq vwgdpiy
//
LOCUS       WP_235189987             193 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DMP19 family protein [Stenotrophomonas].
ACCESSION   WP_235189987
VERSION     WP_235189987.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas
  ORGANISM  Stenotrophomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae.
REFERENCE   1  (residues 1 to 193)
  AUTHORS   Huang,M.F., Lin,S.J., Ko,T.P., Liao,Y.T., Hsu,K.C. and Wang,H.C.
  TITLE     The monomeric form of Neisseria DNA mimic protein DMP19 prevents
            DNA from binding to the histone-like HU protein
  JOURNAL   PLoS One 12 (12), e0189461 (2017)
   PUBMED   29220372
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 193)
  AUTHORS   Wang,H.C., Ko,T.P., Wu,M.L., Ku,S.C., Wu,H.J. and Wang,A.H.
  TITLE     Neisseria conserved protein DMP19 is a DNA mimic protein that
            prevents DNA binding to a hypothetical nitrogen-response
            transcription factor
  JOURNAL   Nucleic Acids Res 40 (12), 5718-5730 (2012)
   PUBMED   22373915
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025658.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14300.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Stenotrophomonas"
                     /db_xref="taxon:40323"
     Protein         1..193
                     /product="DMP19 family protein"
                     /calculated_mol_wt=21800
     Region          65..187
                     /region_name="DUF4375"
                     /note="Domain of unknown function (DUF4375); pfam14300"
                     /db_xref="CDD:433851"
ORIGIN      
        1 millataarn dglcmpcgng trqsmemare rdreireerk rfeesaegry whwlieqvhg
       61 ggcgfaglsv hdqryfaina lisdvyrggl dayfhnsagg yiaealagle eierldvrdi
      121 vlaaqrllfg neamedhhaq rrlqiyradg ylgdeletal daldgrfyal vddgqleell
      181 kayaerhrly aaf
//
LOCUS       WP_235190447            1055 aa            linear   BCT 02-MAR-2025
DEFINITION  Calx-beta domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_235190447
VERSION     WP_235190447.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 1055)
  AUTHORS   Schwarz,E. and Benzer,S.
  TITLE     The recently reported NIbeta domain is already known as the
            Calx-beta motif
  JOURNAL   Trends Biochem Sci 24 (7), 260 (1999)
   PUBMED   10390612
REFERENCE   2  (residues 1 to 1055)
  AUTHORS   Schwarz,E.M. and Benzer,S.
  TITLE     Calx, a Na-Ca exchanger gene of Drosophila melanogaster
  JOURNAL   Proc Natl Acad Sci U S A 94 (19), 10249-10254 (1997)
   PUBMED   9294196
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015140.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03160.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..1055
                     /product="Calx-beta domain-containing protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007154 - cell communication [Evidence
                     IEA]"
                     /calculated_mol_wt=108900
     Region          8..120
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          <87..978
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
ORIGIN      
        1 mervtfgslm snivvigldg eirtleqgql pkpgelvine vsdtselvie qvtpqgssin
       61 vtgditalie aiaagqdptq lgqefetaag eaigsspqtt gnvartgtel lastnfetvg
      121 tegagfsttq iltlldilpp tqapaptgtp ipvtitvqdi sspavdegqq vsfdvtlnqp
      181 teeettieft lndgsavgga asdvgadyvn ttvlitlsdg ttqeiqvndd gsftvslpig
      241 eesftvrldt iddnlaegse tfslsgstpd qptlvtgvat itdeaeqgpe dtvtvnmtgp
      301 nsvsegetts eytvtlsepa pvgsivtlay sytsasgddi tettqaiiga dgvtatftid
      361 tvddvyaegd evfrvsvsgi vdsdsnpife alnldnafvd ttisdetdpg pedtvtvtmt
      421 gpanvvegdt ttdytvtlsd papvgsivtl aysyttasgd ditettqaii gadgvtatft
      481 idtvddvyae gdevfrvsvs givdsdsnpi fealnldnaf vdttisdetd pgpedtvtvt
      541 mtgpanvveg dtttdytvtl sdpapvgsiv tlaysyttas gdditettqa iigadgvtat
      601 ftidtvddvy aegdevfrvs vsgivdsdsn pifealnldn afvdttisde tdpgpedtvt
      661 mtgpanvveg dtttdytvtl sdpapvgsiv tlaysyttas gdditettqa vigadgvtat
      721 ftidtvddvy aegdevfrvs vsgivdsdsn pifealnldn afvdttisde tdpgpedtvt
      781 vtmtgpanvv egdttteytv tlsdpapvgs ivtlaysytt asgdditett qavigadgvt
      841 atftidtvdd vyaegdevfr vsvsgivdsd snpifealnl dnafvdttis detdpgpedt
      901 vtvtmtgpan vvegdtttdy tvtlsdpapv gsivtlaysy ttasgddite ttqaiigadg
      961 vtatftidtv ddvyaegdev frvsvsgivd gdsnpifeal dvsnafvdtt isdetdpgpe
     1021 dtvtvtmtgp anvvegdttt dytvtlsdpa pvvas
//
LOCUS       WP_235190479             223 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Leuconostoc
            mesenteroides].
ACCESSION   WP_235190479
VERSION     WP_235190479.1
KEYWORDS    RefSeq.
SOURCE      Leuconostoc mesenteroides
  ORGANISM  Leuconostoc mesenteroides
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Leuconostoc.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Leuconostoc mesenteroides"
                     /db_xref="taxon:1245"
     Protein         1..223
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=25774
     Region          4..>213
                     /region_name="SgrR"
                     /note="DNA-binding transcriptional regulator SgrR of sgrS
                     sRNA, contains a MarR-type HTH domain and a
                     periplasmic-type solute-binding domain [Transcription];
                     COG4533"
                     /db_xref="CDD:443600"
     Region          121..>216
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 midqtyfdlr mtyqqfgqkl tisiselakf wsistkqvkr rlrayeeqkl lhyypgqgrg
       61 hltqiifqss frdevimgmk qaivtedtit ifyllklsvp aswlasfrgn lpnflgiqty
      121 senkrvlrql atrpittlds vqvairreyq lvlqlgdtlv qfdeglkagl ahhwqsnnda
      181 tvwtfylrke vrfhngetmt avdvkrtfer vrnevggivl atc
//
LOCUS       WP_235190485             196 aa            linear   BCT 02-MAR-2025
DEFINITION  isocitrate/isopropylmalate family dehydrogenase [Leuconostoc
            mesenteroides].
ACCESSION   WP_235190485
VERSION     WP_235190485.1
KEYWORDS    RefSeq.
SOURCE      Leuconostoc mesenteroides
  ORGANISM  Leuconostoc mesenteroides
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Leuconostoc.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012407.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00180.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Leuconostoc mesenteroides"
                     /db_xref="taxon:1245"
     Protein         1..196
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /GO_function="GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /calculated_mol_wt=21686
     Region          1..>118
                     /region_name="Iso_dh"
                     /note="Isocitrate/isopropylmalate dehydrogenase; cl00445"
                     /db_xref="CDD:444908"
ORIGIN      
        1 mknydgvlvg alnqevgtds llsvqeslva lrkylnitla ckavqisdnn vdasplknqi
       61 vrdtdfiivq sakrandhvd gnisvddfaq dtityeqpev eqvitagfer amnrtsldvv
      121 apkwvdeiln eesqkitglp etvplcmknn sgqmlyqlpq invddknlmm svgkdtakli
      181 lkecfnhydn lqklgv
//
LOCUS       WP_235190494             118 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Leuconostoc mesenteroides].
ACCESSION   WP_235190494
VERSION     WP_235190494.1
KEYWORDS    RefSeq.
SOURCE      Leuconostoc mesenteroides
  ORGANISM  Leuconostoc mesenteroides
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Leuconostoc.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Leuconostoc mesenteroides"
                     /db_xref="taxon:1245"
     Protein         1..118
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=13000
     Region          1..>103
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 msiylfhayn aqitgvlmmi niiisflagt yggyltdvfg rrrlllfgef ikllasigiv
       61 canlpvyhfp wltfvmmflg niasglispa seamlidvst ekhvpscmps iigritwh
//
LOCUS       WP_235190504             166 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6678 family protein [Vibrio parahaemolyticus].
ACCESSION   WP_235190504
VERSION     WP_235190504.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042561.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20383.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..166
                     /product="DUF6678 family protein"
                     /calculated_mol_wt=19323
     Region          35..157
                     /region_name="DUF6678"
                     /note="Family of unknown function (DUF6678); pfam20383"
                     /db_xref="CDD:466532"
ORIGIN      
        1 mftaqwfrfg ggvvhplmrr yvywefmrld lksniiklid snglfgvmnn tkwnnllaal
       61 sdidellsyr vtyidgstwp esdssyqyts elaqiwgnfr aihfididar ishsrgvlle
      121 pevrdhrdkv iaickeqnak isltecgvri wgyfqhgkdv emykyt
//
LOCUS       WP_235190572             554 aa            linear   BCT 02-MAR-2025
DEFINITION  alkaline phosphatase PhoX, partial [Amycolatopsis mediterranei].
ACCESSION   WP_235190572
VERSION     WP_235190572.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis mediterranei
  ORGANISM  Amycolatopsis mediterranei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
REFERENCE   1  (residues 1 to 554)
  AUTHORS   Yong,S.C., Roversi,P., Lillington,J., Rodriguez,F., Krehenbrink,M.,
            Zeldin,O.B., Garman,E.F., Lea,S.M. and Berks,B.C.
  TITLE     A complex iron-calcium cofactor catalyzing phosphotransfer
            chemistry
  JOURNAL   Science 345 (6201), 1170-1173 (2014)
   PUBMED   25190793
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017591.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05787.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Amycolatopsis mediterranei"
                     /db_xref="taxon:33910"
     Protein         <1..554
                     /product="alkaline phosphatase PhoX"
ORIGIN      
        1 ggfemrpsrr tkartvlvaa gglalaatvv agapaqgmgq hgagrglalt gvpanakvag
       61 ltvanalspe lagwvaaqgs nrlenpvadi pffgyrgdgp llpapgdlpa aghlveaskt
      121 epdkntylvl hgqrgadphy dygthfvfqg heagatgfit rvnldadtah rvtllatatt
      181 dgkplpnfdg stwdpwarrl lftaelgagg gvwqstldgs rtedisgalg rggyegiqnd
      241 sagnlwvved sggatvpgtn aklpnsfvyr yvpgdrgdlt qgklqvlqvf srrtgapiaf
      301 qpidaahpqg nafsddtkdl htyglsfgtk wvtihdtatd pasagfdana lakaagatpf
      361 krpengqfrp gsgfrefyfd etgdtnatst andgyggwga vlklsqadpk adtgtlslvy
      421 ngdkehtgld nvtfldndhv afvedagdsl htqrglldsa ylfdlradya hgaqpvrfla
      481 egrdpsatld salsgrtgfq ndgdneitgi hasngdpspq gvlgaqrptp fgggwrlfwt
      541 qqhgdnvlwe itrr
//
LOCUS       WP_235190600            1259 aa            linear   BCT 02-MAR-2025
DEFINITION  YadA-like family protein [Xylella fastidiosa].
ACCESSION   WP_235190600
VERSION     WP_235190600.1
KEYWORDS    RefSeq.
SOURCE      Xylella fastidiosa
  ORGANISM  Xylella fastidiosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xylella.
REFERENCE   1  (residues 1 to 1259)
  AUTHORS   Sandt,C.H. and Hill,C.W.
  TITLE     Nonimmune binding of human immunoglobulin A (IgA) and IgG Fc by
            distinct sequence segments of the EibF cell surface protein of
            Escherichia coli
  JOURNAL   Infect Immun 69 (12), 7293-7303 (2001)
   PUBMED   11705900
REFERENCE   2  (residues 1 to 1259)
  AUTHORS   Hoiczyk,E., Roggenkamp,A., Reichenbecher,M., Lupas,A. and
            Heesemann,J.
  TITLE     Structure and sequence analysis of Yersinia YadA and Moraxella
            UspAs reveal a novel class of adhesins
  JOURNAL   EMBO J 19 (22), 5989-5999 (2000)
   PUBMED   11080146
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015831.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03895.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1259
                     /organism="Xylella fastidiosa"
                     /db_xref="taxon:2371"
     Protein         1..1259
                     /product="YadA-like family protein"
                     /calculated_mol_wt=124107
     Region          5..620
                     /region_name="Hia"
                     /note="Autotransporter adhesin [Intracellular trafficking,
                     secretion, and vesicular transport, Extracellular
                     structures]; COG5295"
                     /db_xref="CDD:444098"
     Region          429..1258
                     /region_name="Hia"
                     /note="Autotransporter adhesin [Intracellular trafficking,
                     secretion, and vesicular transport, Extracellular
                     structures]; COG5295"
                     /db_xref="CDD:444098"
ORIGIN      
        1 mntmagtnai aigsaqssaa dalkaslatk atgaraiaig akasadgtdt valgsgatag
       61 tgassvaigl nasavngava vgggalvtvp dgavalglns vastgkglsg ydpktktist
      121 dasaawkstl aavsigdvss snfktrqlsg laagtsntda vnvaqlkvvd eiaskgwnlt
      181 asgansgnvg pgssvdlknt dknltitkai gsndvefnln kdvkvttlav gdallntdgi
      241 algtdvalgt tgltiangpa vtasgidags kvishvaage vsetstdavn gsqlnavqvq
      301 asqpvtfsgn egsvkrslgq avvisgesst agtysggnlk svvdeaagai hlqladspkf
      361 gnvvinnggk isgltagted tdavnlsqlk sisdtvdkgw mltasgangs kvvsggavdl
      421 kntdgnltis ksddsndvvf nlskdfkvdg mtsgttvvnn dgvkvgsdva lgttgltitn
      481 gpavtasgid agskvishva agevsetstd avngsqlnav qvqasqpvtf sgnegsvkrs
      541 lgqavvisge sstagtysgg nlksvvdeaa gaihlqlads pkfgnvvinn ggkisgltag
      601 tedtdavnls qlksisdtvd kgwmltasga ngskvvsgga vdlkntdgnl tisksddsnd
      661 vvfnlsqdlk ensvtvgntq vnkdgvkvsn dvllsskelv itshsstssv rtlangesva
      721 nrtvvngdgv niddvvvvnd lglsivggas vtlsginags hkitnvtagt edtdavnfsq
      781 lksvseavdk gwtltasgan gskvvsggtv dlkntdgnlt iskssdsndv vfnlskdfkv
      841 devtagntvv ntdgvkvgsd vslgamglfi angpsvtasg fnagdkvish vavgmadtda
      901 vnvsqlkqav qnvsvkatry ystndggtqg gnydgdgatg skavaagvgt qasgegatav
      961 gsgaassgkg staigrnaia sadgsvalgd gakdggrgae sytgkysgvq nntmgtvsvg
     1021 daakgetrsi snvadakeat davnlrqlda vaqksnlqtd dmrheinnie dvfkvtkgds
     1081 tpsvkgmgvn amaigtnaav sgtdsvalgk ntnvsadnav aigndsvadr ansvsvgsag
     1141 sqrqvtnvaa gtadtdavnv sqlnqglita kqytdgmvgn lrretsggva aaiatanlpq
     1201 ayvqgrgmts vgvssyqgqs aiavgvsavs esghwvfkfs gsantrshvg vgagvgyqw
//
LOCUS       WP_235190603             255 aa            linear   BCT 02-MAR-2025
DEFINITION  multicopper oxidase domain-containing protein [Xylella fastidiosa].
ACCESSION   WP_235190603
VERSION     WP_235190603.1
KEYWORDS    RefSeq.
SOURCE      Xylella fastidiosa
  ORGANISM  Xylella fastidiosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xylella.
REFERENCE   1  (residues 1 to 255)
  AUTHORS   Page,C.C., Moser,C.C., Chen,X. and Dutton,P.L.
  TITLE     Natural engineering principles of electron tunnelling in biological
            oxidation-reduction
  JOURNAL   Nature 402 (6757), 47-52 (1999)
   PUBMED   10573417
REFERENCE   2  (residues 1 to 255)
  AUTHORS   Grossmann,J.G., Ingledew,W.J., Harvey,I., Strange,R.W. and
            Hasnain,S.S.
  TITLE     X-ray absorption studies and homology modeling define the
            structural features that specify the nature of the copper site in
            rusticyanin
  JOURNAL   Biochemistry 34 (26), 8406-8414 (1995)
   PUBMED   7599131
REFERENCE   3  (residues 1 to 255)
  AUTHORS   Messerschmidt,A., Ladenstein,R., Huber,R., Bolognesi,M.,
            Avigliano,L., Petruzzelli,R., Rossi,A. and Finazzi-Agro,A.
  TITLE     Refined crystal structure of ascorbate oxidase at 1.9 A resolution
  JOURNAL   J Mol Biol 224 (1), 179-205 (1992)
   PUBMED   1548698
REFERENCE   4  (residues 1 to 255)
  AUTHORS   Messerschmidt,A. and Huber,R.
  TITLE     The blue oxidases, ascorbate oxidase, laccase and ceruloplasmin.
            Modelling and structural relationships
  JOURNAL   Eur J Biochem 187 (2), 341-352 (1990)
   PUBMED   2404764
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019351.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07731.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Xylella fastidiosa"
                     /db_xref="taxon:2371"
     Protein         1..255
                     /product="multicopper oxidase domain-containing protein"
                     /GO_function="GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=29015
     Region          96..246
                     /region_name="CuRO_3_Tth-MCO_like"
                     /note="The third cupredoxin domain of the bacterial
                     laccases similar to Tth-MCO from Thermus Thermophilus;
                     cd13900"
                     /db_xref="CDD:259967"
     Site            order(108,110,143..144,146,185..191,193,195,231..235,
                     237..238)
                     /site_type="other"
                     /note="Domain 2 interface [polypeptide binding]"
                     /db_xref="CDD:259967"
     Site            order(117,148,150..151,153,190..191,220..221,224..225,227,
                     229,231,233..234,236..237,241)
                     /site_type="other"
                     /note="Domain 1 interface [polypeptide binding]"
                     /db_xref="CDD:259967"
ORIGIN      
        1 malslfldkd niptneitsv lvnkliksae kfmpenvree vikdiahveg kdnhheillr
       61 kftphpidia dnevqgqskq kllffvgqds dkhnifalsh dfsvknvngv yipskpfiyn
      121 pnklglnlpl gkaqewelrs ysvshpfhih vnpfqivaiy dpqgrdvsap gvveadgdtq
      181 fsglkgqwkd tilvktnllp gdlknnpknf yrfiirtryq ryigefvlhc hildhedqgm
      241 mekiavslqd nvdvh
//
LOCUS       WP_235190628             144 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2326 domain-containing protein [Xylella fastidiosa].
ACCESSION   WP_235190628
VERSION     WP_235190628.1
KEYWORDS    RefSeq.
SOURCE      Xylella fastidiosa
  ORGANISM  Xylella fastidiosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xylella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021594.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10088.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Xylella fastidiosa"
                     /db_xref="taxon:2371"
     Protein         1..144
                     /product="DUF2326 domain-containing protein"
                     /calculated_mol_wt=16357
     Region          <1..144
                     /region_name="YydB"
                     /note="Uncharacterized conserved protein YydD, contains
                     DUF2326 domain [Function unknown]; COG5293"
                     /db_xref="CDD:444096"
ORIGIN      
        1 mirevidcyg slrvttnkhg hlefhaeitd aagkptsadl gntyrrlmci afdlavlray
       61 lndpfprfvy hdgvfesldd rkkenllrvi rqyasfgiqs vitlidsdlp ersvndlpvf
      121 spdeivltlh degelgrlfk mqsw
//
LOCUS       WP_235190632             840 aa            linear   BCT 02-MAR-2025
DEFINITION  hemagglutinin repeat-containing protein [Xylella fastidiosa].
ACCESSION   WP_235190632
VERSION     WP_235190632.1
KEYWORDS    RefSeq.
SOURCE      Xylella fastidiosa
  ORGANISM  Xylella fastidiosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xylella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024728.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13332.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Xylella fastidiosa"
                     /db_xref="taxon:2371"
     Protein         1..840
                     /product="hemagglutinin repeat-containing protein"
                     /calculated_mol_wt=85508
     Region          214..386
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          316..479
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
ORIGIN      
        1 msstlsgtkv lvkgnnitvt gshllsdagt ymqaehdltl qaatnttqst ysqhtkqsgl
       61 irnggasltl gnqsqrtdst ttattttgsl igatngnvtl lagghyqqig sdvlspngdi
      121 dihakkvdii qahhtshttq htatrqsglt vglsnpliag vqtaqqmqha aarsgdprlh
      181 alaglttalg akntidavrq dpralgglna sltvgssthd stttttttta agsnvkaggn
      241 vrisatgdge astltiqgsh vrgdnmtylk adgdiallaa antttsdrqs rgrsagvgva
      301 vnlgssgtsa gltahastst gsgqstdltw tnshvgggnl ltieaggdll mkgaigtakh
      361 viadiagnlt iqslqdthhy rskdrslggs ltvgagvsgs anlnnqtirs dyasvtqqsg
      421 lftgdggydi tvggqthlig gaitsnstai hnglnsldtg tlilqnienr anytatqvnl
      481 gggysrnggt vgtdqqghaa tatqvpgttl pnhnglsasp psamtashss hsttysgisq
      541 galtirdpaa qhaltghtaa qtiaglnrdi ltdtatsnal ipifdeqrin agfdivtalq
      601 retgtfinnr aaeadlktrq ataadqaahd psnglndqqr qtlrdqaitl tneaqaikda
      661 wgpggtyrqi ttalaagasg nvsaassdla khmivnyvqq qgataighwv atgqltegsp
      721 lhavlhalla cagaaasqqs cssgaqgaaa ssvltglfsd prpedtaqdr eakrnlitsi
      781 vtgiasttht daatatnaai aavdnnwlat qqvvqmkkdi saaknnleml kviakwgafi
//
LOCUS       WP_235190652             397 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein, partial [Xylella fastidiosa].
ACCESSION   WP_235190652
VERSION     WP_235190652.1
KEYWORDS    RefSeq.
SOURCE      Xylella fastidiosa
  ORGANISM  Xylella fastidiosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xylella.
REFERENCE   1  (residues 1 to 397)
  AUTHORS   Aravind,L., Leipe,D.D. and Koonin,E.V.
  TITLE     Toprim--a conserved catalytic domain in type IA and II
            topoisomerases, DnaG-type primases, OLD family nucleases and RecR
            proteins
  JOURNAL   Nucleic Acids Res 26 (18), 4205-4213 (1998)
   PUBMED   9722641
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025044.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13662.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Xylella fastidiosa"
                     /db_xref="taxon:2371"
     Protein         <1..397
                     /product="toprim domain-containing protein"
     Region          <17..39
                     /region_name="DUF5710"
                     /note="Domain of unknown function (DUF5710); cl46755"
                     /db_xref="CDD:481095"
     Region          44..>367
                     /region_name="COG4643"
                     /note="Uncharacterized domain associated with
                     phage/plasmid primase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:443681"
ORIGIN      
        1 vkeiggkppn gnnavdwdna akcwyanpga dldklkpwia teimsrqvpa lspekefaet
       61 lrslgclvsg ehpimdakkh rievegdkkg ekagfyvayl dghpsgyikn nrtgielkwk
      121 skgylldaeq kaamqaeaaa klaaraeqqq qeqeavtqrv vkqmddlvtv ieptpylkak
      181 gitpqagiyt dsdgqktyip aidsdgkqwt mqyiqedgtk rfakggrkeg cfhpigglaa
      241 iaaapvivig egyatvaqvs qalgygtvva fdagnlegva kalhksfpdk piliagdddq
      301 slpnnpgktk aqeaaravdg taffpifapg eqadnpkgft dfndlatksa lgieaverqv
      361 haavskaidn hqkrvqqqtq qqgqheqkqe rrrlrvr
//
LOCUS       WP_235190794             553 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Amycolatopsis rifamycinica].
ACCESSION   WP_235190794
VERSION     WP_235190794.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis rifamycinica
  ORGANISM  Amycolatopsis rifamycinica
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
REFERENCE   1  (residues 1 to 553)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Amycolatopsis rifamycinica"
                     /db_xref="taxon:287986"
     Protein         1..553
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=58420
     Region          <178..>265
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     Region          401..498
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 maataalfaa avpaaaadpl tpyttqqltw ggcpfepaad ekpaqcarvt vprdwadpaa
       61 gpelevsisr vaatgerrga illnpggpgg qgtplagqla alqpsvnqly dfvgmdprgt
      121 ghagtddrgf qcqvpvgrlp qgpldardrs aasiaahqqt pravaeacqs dalapyvttw
      181 qtahdmdlir vllgdeklny lgysygtwlg akyaslfpgh tgktvldssv dfegrlqadf
      241 eafpvidqrq fddvylpwla rnapaqlggt paevkakwer vrayygthgl apdtydsifv
      301 gngsafrwal galifllgaq aldgttapap aalagdldav srtafgvpaa elttdrvaas
      361 slapdyrqts gtryavacgd qptrsaawyk rlsdrqgpsy plfgwayglt epcafwsdkp
      421 qhelppripa eaaanilvvq gefdpqtgye qatsgarsag vplvsvddsp fhgqyalggn
      481 pcvdglvnvf lvknsrprst tcpgvplpge eqvypvagpv rsaaqsvraq sfrgvtalpa
      541 rvqdeistln rkr
//
LOCUS       WP_235190798              69 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-binding dehydrogenase [Amycolatopsis rifamycinica].
ACCESSION   WP_235190798
VERSION     WP_235190798.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis rifamycinica
  ORGANISM  Amycolatopsis rifamycinica
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024989.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13602.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Amycolatopsis rifamycinica"
                     /db_xref="taxon:287986"
     Protein         1..69
                     /product="zinc-binding dehydrogenase"
                     /calculated_mol_wt=6948
     Region          <1..66
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
ORIGIN      
        1 mvfsrivagg dvgsqgrila raaddvaagr lrpivtttle gltaesmkta halaesgrti
       61 gktvirvtg
//
LOCUS       WP_235190824             531 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Amycolatopsis rifamycinica].
ACCESSION   WP_235190824
VERSION     WP_235190824.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis rifamycinica
  ORGANISM  Amycolatopsis rifamycinica
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
REFERENCE   1  (residues 1 to 531)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Amycolatopsis rifamycinica"
                     /db_xref="taxon:287986"
     Protein         1..531
                     /product="AMP-binding protein"
                     /calculated_mol_wt=54468
     Region          1..522
                     /region_name="PRK07529"
                     /note="AMP-binding domain protein; Validated"
                     /db_xref="CDD:236043"
ORIGIN      
        1 maphcadlip atlaaqlagi aaplngglsr ahlgellrrs garvlitagp elapevwdta
       61 relaagldai lvlrptgaag epaalpvldg vrvaylaela aghdpagfag eppaaadlaa
      121 lfptggttga pklaahthan evadawmiav gsplddgsvv faalplfhvn alvvtllapl
      181 fkgqqavwag plgyrepaly gqfwkivehh riaamsavpt vyavlarcpv dadiaglrya
      241 migasplpaa vraefeahtg vtlvegyglt eatcasargf pgaprpgtvg qrlpyqrmkv
      301 vhpetgeelp cgqtgvlais gpavfagyvv grdengplld glgklrdgwl dtgdlarlda
      361 dgfvhlagra kdliirgghn idpamiedal lshpdvtaag avgrpdehag evpvgyvtla
      421 pgatvtedal lawaadhvpe raavpkavtv ldtlpstdig kpskltlrad atrraiaeal
      481 apfdgvtvda viedgtvvaa vtlpsevdep gvratlgryt vparltfrgn s
//
LOCUS       WP_235190860             188 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphatase PAP2 family protein [Amycolatopsis rifamycinica].
ACCESSION   WP_235190860
VERSION     WP_235190860.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis rifamycinica
  ORGANISM  Amycolatopsis rifamycinica
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
REFERENCE   1  (residues 1 to 188)
  AUTHORS   Neuwald,A.F.
  TITLE     An unexpected structural relationship between integral membrane
            phosphatases and soluble haloperoxidases
  JOURNAL   Protein Sci 6 (8), 1764-1767 (1997)
   PUBMED   9260289
REFERENCE   2  (residues 1 to 188)
  AUTHORS   Stukey,J. and Carman,G.M.
  TITLE     Identification of a novel phosphatase sequence motif
  JOURNAL   Protein Sci 6 (2), 469-472 (1997)
   PUBMED   9041652
REFERENCE   3  (residues 1 to 188)
  AUTHORS   Messerschmidt,A. and Wever,R.
  TITLE     X-ray structure of a vanadium-containing enzyme: chloroperoxidase
            from the fungus Curvularia inaequalis
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 392-396 (1996)
   PUBMED   8552646
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013718.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01569.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Amycolatopsis rifamycinica"
                     /db_xref="taxon:287986"
     Protein         1..188
                     /product="phosphatase PAP2 family protein"
                     /calculated_mol_wt=18967
     Region          30..178
                     /region_name="PAP2_like"
                     /note="PAP2_like proteins, a super-family of histidine
                     phosphatases and vanadium haloperoxidases, includes type 2
                     phosphatidic acid phosphatase or lipid phosphate
                     phosphatase (LPP), Glucose-6-phosphatase,
                     Phosphatidylglycerophosphatase B and bacterial acid...;
                     cl00474"
                     /db_xref="CDD:469784"
ORIGIN      
        1 mrtirvpaav cgllalllgl pfaggttpga vdgavagava hlspgvvral vlptepsvvl
       61 algllgvylc lragrrleag lalaapvlai lltgwvlkpl ydrwkngtlv ypsghtvslv
      121 avltvlvlvt rrvvvavlsa vallaaaagl vgmgyhyltd vvggtlfavs vvlfswparr
      181 papapstg
//
LOCUS       WP_235190862             376 aa            linear   BCT 02-MAR-2025
DEFINITION  Cys-Gln thioester bond-forming surface protein [Amycolatopsis
            rifamycinica].
ACCESSION   WP_235190862
VERSION     WP_235190862.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis rifamycinica
  ORGANISM  Amycolatopsis rifamycinica
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
REFERENCE   1  (residues 1 to 376)
  AUTHORS   Pointon,J.A., Smith,W.D., Saalbach,G., Crow,A., Kehoe,M.A. and
            Banfield,M.J.
  TITLE     A highly unusual thioester bond in a pilus adhesin is required for
            efficient host cell interaction
  JOURNAL   J Biol Chem 285 (44), 33858-33866 (2010)
   PUBMED   20729215
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019941.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08341.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Amycolatopsis rifamycinica"
                     /db_xref="taxon:287986"
     Protein         1..376
                     /product="Cys-Gln thioester bond-forming surface protein"
                     /calculated_mol_wt=38681
     Region          68..188
                     /region_name="TED"
                     /note="Thioester domain; pfam08341"
                     /db_xref="CDD:462437"
     Region          <201..>352
                     /region_name="PRK12373"
                     /note="NADH-quinone oxidoreductase subunit E"
                     /db_xref="CDD:237082"
ORIGIN      
        1 mrggiavlaa aaatmvgapa aladdgaarg rvieatsttg yrvnldhgdp yaklfdfkls
       61 dgkslklycv qisvhmrtdv dmverpwnky pdasspftkn sdkinwvlhh gypgvkldai
      121 eaalgkqgvk vhdglspqea itatqaavwh fsdgvnldlk kplkednpae anadvaalys
      181 ylvgdlnkgi geqpkptlni agpkaegkag tkigpfevat sgdvtsltte lpegvkvtda
      241 dgkelkaadv kdgsklfvdv pagtkpgngs fslkasgeld tgrlfvaeny arqpaqsliv
      301 adsektqvta kaaaswteag apatspaptt paggapsggg elantgvdaa vpfgigglll
      361 gggalmllln rrrsra
//
LOCUS       WP_235190914             137 aa            linear   BCT 02-MAR-2025
DEFINITION  SAV_6107 family HEPN domain-containing protein [Amycolatopsis
            rifamycinica].
ACCESSION   WP_235190914
VERSION     WP_235190914.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis rifamycinica
  ORGANISM  Amycolatopsis rifamycinica
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
REFERENCE   1  (residues 1 to 137)
  AUTHORS   Anantharaman,V., Makarova,K.S., Burroughs,A.M., Koonin,E.V. and
            Aravind,L.
  TITLE     Comprehensive analysis of the HEPN superfamily: identification of
            novel roles in intra-genomic conflicts, defense, pathogenesis and
            RNA processing
  JOURNAL   Biol Direct 8, 15 (2013)
   PUBMED   23768067
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037499.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18726.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Amycolatopsis rifamycinica"
                     /db_xref="taxon:287986"
     Protein         1..137
                     /product="SAV_6107 family HEPN domain-containing protein"
                     /calculated_mol_wt=13864
     Region          25..122
                     /region_name="HEPN_SAV_6107"
                     /note="SAV_6107-like HEPN; pfam18726"
                     /db_xref="CDD:436694"
ORIGIN      
        1 malrppaspa aagllaqarr glaeaaqetr paerfigayl aalrgaaavl aargrphrgr
       61 arpastwvll dsvapelrew saffasnsat raaaqagitg kvtaesaagl vgaatpflel
      121 vrrlvhglpi tggahva
//
LOCUS       WP_235190915             436 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Amycolatopsis rifamycinica].
ACCESSION   WP_235190915
VERSION     WP_235190915.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis rifamycinica
  ORGANISM  Amycolatopsis rifamycinica
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Amycolatopsis rifamycinica"
                     /db_xref="taxon:287986"
     Protein         1..436
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47197
     Region          22..342
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(24..25,28..29,32,64,114..115,117..119,122,142,
                     145..146,149,229,232..233,236..238,241,269,273,321..322,
                     326,330)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mlglrlpakp avqravrlty gfqfffglll wvpifysyqk liglsdgeif giqsiyyivf
       61 clleiptgmi adrfdyrtsl tagagvlvaa nlvpvflssy pgflvhfvli alarslvsga
      121 qsaylyeylh asgagehylr vegvgraysl vgkivfwpvi gllmswslps pywltainag
      181 ialafalklp pipggrrvtd ktaslvaglg galwtlrssr wlvllmvqgv amftlvricq
      241 vnlfqpiles ktlsvnwygt vlaamtvfea lgaarphrlr raigpvgsvf tltivmalcl
      301 gvivfvgafp avvllcvfav atgiafpiqk qllndsitds ryratllsme sivdravcal
      361 vavalgayla agqlneflll taivtcgamg llavlllavr khrsdrrvpa arrpgttfpp
      421 adpqlrtrhe vgevrh
//
LOCUS       WP_235190920             238 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF742 domain-containing protein [Amycolatopsis rifamycinica].
ACCESSION   WP_235190920
VERSION     WP_235190920.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis rifamycinica
  ORGANISM  Amycolatopsis rifamycinica
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017170.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05331.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Amycolatopsis rifamycinica"
                     /db_xref="taxon:287986"
     Protein         1..238
                     /product="DUF742 domain-containing protein"
                     /calculated_mol_wt=24470
     Region          124..238
                     /region_name="HTH_CRP"
                     /note="helix_turn_helix, cAMP Regulatory protein
                     C-terminus; DNA binding domain of prokaryotic regulatory
                     proteins belonging to the catabolite activator protein
                     family; cl46859"
                     /db_xref="CDD:481199"
ORIGIN      
        1 mstgsgfdge ppaghssagr gddgtfadvl ngftldsgra rrkrkkskes pqppaagaya
       61 aadppapaps adqgdrvtsl vsppgstdgd sprpgglfdp gppsgefvmp avfeqppape
      121 eltaivrpya ltggrtrany aleletlisa kdyaatggfp evaaeqieci simeecrtpr
      181 svaeivsalr vplgvarvli sdaadaglvt vhktitgndg aeahlvlmer vlsglrrl
//
LOCUS       WP_235191038             376 aa            linear   BCT 02-MAR-2025
DEFINITION  YbfB/YjiJ family MFS transporter [Amycolatopsis rifamycinica].
ACCESSION   WP_235191038
VERSION     WP_235191038.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis rifamycinica
  ORGANISM  Amycolatopsis rifamycinica
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018485.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06779.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Amycolatopsis rifamycinica"
                     /db_xref="taxon:287986"
     Protein         1..376
                     /product="YbfB/YjiJ family MFS transporter"
                     /calculated_mol_wt=37092
     Region          13..337
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(23..24,27..28,31,63,112..113,115..117,120,136,
                     139..140,143,208,211..212,215..217,220,247,251,296..297,
                     301,305,324,327..328,331..332,335)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mrtktdtwas taavgavvia lcygfaryay gpfvprfset fglttlgvgv lgglstagyg
       61 vglllaprts arsargtvlv aaaaatlglg lmalaphvav fgagiavaga gaglvspgva
      121 qligetvgtr trdraqtwan tgtglglaas aftpllafgw pviwaafaal gvavtslawr
      181 alprsagped vpapagpvrg mgpllansvl igvtsapywt fstsrlaetg lgpvaatwcw
      241 atigvagllg glagraagra glrtvnlatw tlaaagiall alphpgvava llssalfgvt
      301 ymaltglcil waarlvpdrp argitwsfag lgvgqtvasp lagaaaaglg saavfgvaal
      361 valtawsqlh prlgpp
//
LOCUS       WP_235191049            1611 aa            linear   BCT 02-MAR-2025
DEFINITION  toxin glutamine deamidase domain-containing protein [Amycolatopsis
            rifamycinica].
ACCESSION   WP_235191049
VERSION     WP_235191049.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis rifamycinica
  ORGANISM  Amycolatopsis rifamycinica
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
REFERENCE   1  (residues 1 to 1611)
  AUTHORS   Nishide,A., Kim,M., Takagi,K., Himeno,A., Sanada,T., Sasakawa,C.
            and Mizushima,T.
  TITLE     Structural basis for the recognition of Ubc13 by the Shigella
            flexneri effector OspI
  JOURNAL   J Mol Biol 425 (15), 2623-2631 (2013)
   PUBMED   23542009
REFERENCE   2  (residues 1 to 1611)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 1611)
  AUTHORS   Sanada,T., Kim,M., Mimuro,H., Suzuki,M., Ogawa,M., Oyama,A.,
            Ashida,H., Kobayashi,T., Koyama,T., Nagai,S., Shibata,Y., Gohda,J.,
            Inoue,J., Mizushima,T. and Sasakawa,C.
  TITLE     The Shigella flexneri effector OspI deamidates UBC13 to dampen the
            inflammatory response
  JOURNAL   Nature 483 (7391), 623-626 (2012)
   PUBMED   22407319
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026980.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15644.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1611
                     /organism="Amycolatopsis rifamycinica"
                     /db_xref="taxon:287986"
     Protein         1..1611
                     /product="toxin glutamine deamidase domain-containing
                     protein"
                     /calculated_mol_wt=176411
     Region          <4..534
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          <4..221
                     /region_name="PspC_subgroup_2"
                     /note="pneumococcal surface protein PspC, LPXTG-anchored
                     form; NF033839"
                     /db_xref="CDD:468202"
     Region          638..730
                     /region_name="Gln_amidase"
                     /note="Papain fold toxin 1, glutamine deamidase;
                     pfam15644"
                     /db_xref="CDD:434830"
     Region          1138..1240
                     /region_name="Gln_amidase"
                     /note="Papain fold toxin 1, glutamine deamidase;
                     pfam15644"
                     /db_xref="CDD:434830"
     Region          <1478..1559
                     /region_name="RelA_SpoT"
                     /note="Region found in RelA / SpoT proteins; smart00954"
                     /db_xref="CDD:214934"
     Site            order(1480,1483,1540)
                     /site_type="metal-binding"
                     /note="metal binding triad [ion binding]"
                     /db_xref="CDD:143387"
ORIGIN      
        1 mrerpveqpt pageptqqpa aeqspvrerp veqptppgep tqqpaaeqsp vrerpaeqrt
       61 papteqapaq epsaerrtpt derpaderaa erpdqstptp aeqtpapehp aelgapgner
      121 padesttter epaqegpaeg pdqhapeqnr tseptqerrd eqptptekpp tdqdrpaers
      181 asestperep aqdrpaerpd qtaghhqade papaheraad enapaaghea ghdrpteqpg
      241 ddpnptdage vpgeaggtar erdygqsdld epyltdpgfh tddpagirri edtfmdsgka
      301 shqdgewrhe qvhrearakr dewhpgmsda gavavhaytr temvgplnha lrmgspelvh
      361 lapqaaalvs glnelppheg vvsrrvdfkg dlsrlqafla rfhdgahite psflssskvd
      421 aqhprssfpg evemriqskt grdveklasl gherevlfka gtqfkitgve egpghpnhkp
      481 epvrgephyv vhaeeiapge pghlgeadar daieqrrase radedrfqre adeelakfye
      541 enpkyapgnd lasklnpfde pgaeplperr ppatgepagg wsqlaepltp ggppvlhags
      601 vetpqqharl lrdavpelgg vntrnayspg glengyrtna aesmvaferr mngedvvagp
      661 arqqslaqis eqlggqwssr dsfdgvarel gerpvgarta vafetpqges rlvaavhteh
      721 gvlfadpvtg rlaelpadat gihtlplggg dapqhheapq hhetpqhhea psqhegisdr
      781 lnpqpervph denylfdgeh rgtpadhesi rravgdediy qqihdhalak rdaagnlahl
      841 tdegavalhg ytrgeyaydv nealrrgtdh pgfdlaqqnt raimdglnqi apesgetira
      901 ydvggdprla elvtkpyepg svvvepafss asiktgefst skfgddielh vrsnnlrdis
      961 klaenpgere slsppgtqll iherrletvd grrkwiivae eigpghpryl dpetakqkma
     1021 erraenehna peferrkqaa imerlgglge pehvapqpdq psvhdvqdgp aepppppvsv
     1081 hdysrlarat nppfepaiha ggtteseraa yvhdrhphlr dvnpgfrepg afengyltnc
     1141 trgpraymdq lrgvdttaep ilphemgsrg tlehlegefg qtfsargsyd dviremrgmp
     1201 vdhhavvavk ypgpngveyg hvamvvhtre gvafidpqsg dlmhlpqpan siklmhlgtp
     1261 devhvqtghd agdthggygs aaphdaflar ddvaaaldgh adadyirahl gehpglvrvl
     1321 sdpandyltr slldnpktla sllhhpeaip iledavhevn ergysviddv erqgvepfdp
     1381 tpeqaeisad variadvvqp dalrhgsfdq grvgdpeycr qwvaeererw petqgtlnri
     1441 teriagetdg hpgfrpepkd svralakiek hgwdgsllhd lvgakiqfeq vadlyralda
     1501 vrrdpelkiv dftdrlvdpk esgyrdlqln vrlpnghvae lrlhlthidg vasyehalye
     1561 vrrdfetlsr kegrggffsp eeaalvaalt eqvrgrfgea frrgltsees g
//
LOCUS       WP_235191095             296 aa            linear   BCT 02-MAR-2025
DEFINITION  YhjD/YihY/BrkB family envelope integrity protein [Amycolatopsis
            rifamycinica].
ACCESSION   WP_235191095
VERSION     WP_235191095.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis rifamycinica
  ORGANISM  Amycolatopsis rifamycinica
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
REFERENCE   1  (residues 1 to 296)
  AUTHORS   Ezraty,B., Dahlgren,B. and Deutscher,M.P.
  TITLE     The RNase Z homologue encoded by Escherichia coli elaC gene is
            RNase BN
  JOURNAL   J Biol Chem 280 (17), 16542-16545 (2005)
   PUBMED   15764599
REFERENCE   2  (residues 1 to 296)
  AUTHORS   Callahan,C. and Deutscher,M.P.
  TITLE     Identification and characterization of the Escherichia coli rbn
            gene encoding the tRNA processing enzyme RNase BN
  JOURNAL   J Bacteriol 178 (24), 7329-7332 (1996)
   PUBMED   8955422
REFERENCE   3  (residues 1 to 296)
  AUTHORS   Fernandez,R.C. and Weiss,A.A.
  TITLE     Cloning and sequencing of a Bordetella pertussis serum resistance
            locus
  JOURNAL   Infect Immun 62 (11), 4727-4738 (1994)
   PUBMED   7927748
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015587.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03631.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Amycolatopsis rifamycinica"
                     /db_xref="taxon:287986"
     Protein         1..296
                     /product="YhjD/YihY/BrkB family envelope integrity
                     protein"
                     /calculated_mol_wt=30771
     Region          7..>191
                     /region_name="Virul_fac_BrkB"
                     /note="Virulence factor BrkB; cl46492"
                     /db_xref="CDD:480832"
ORIGIN      
        1 msarevirra gvvlrdagre lrgrdlslwa agvtffavla vvplalvalr gaaflgspef
       61 vrhgvsrwad alpdphgpgp alsalttaal gtpwtallvt llpatfygeg llrglvqvag
      121 qpagalvgwr grlmfvpvlv lsptlaiapl atadtvagly trggwptfwg itlsfhidwl
      181 iiasvtaivf agsaprgvrr gplvagafav aavlagffhg fllflaipld wsvpfgglvv
      241 vgavsalilw lyllhvllll gyrltlsaer tqlgaggida easktptrsp asgqvh
//
LOCUS       WP_235191121             236 aa            linear   BCT 02-MAR-2025
DEFINITION  rhomboid-like protein [Amycolatopsis rifamycinica].
ACCESSION   WP_235191121
VERSION     WP_235191121.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis rifamycinica
  ORGANISM  Amycolatopsis rifamycinica
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042501.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20401.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Amycolatopsis rifamycinica"
                     /db_xref="taxon:287986"
     Protein         1..236
                     /product="rhomboid-like protein"
                     /calculated_mol_wt=25460
     Region          35..226
                     /region_name="Rhomboid_2"
                     /note="Rhomboid-like protein; pfam20401"
                     /db_xref="CDD:466550"
ORIGIN      
        1 mttearpmll radrpvtvar rwsllryvpn pkttpftfgy livllgttll lefadpavtt
       61 rllelsstda hnlgrrplts lltsaiwlsg eswfayalif avavaplerr fgarraalvf
      121 faghvvatlv telpvmalis ahvlphsagh wldlgvsygf fttagalvfl apgyvrllal
      181 aateafiavi wlsddpgslg svvtllghaf aahfgllvcg pwlrerirrp spdsag
//
LOCUS       WP_235191166             441 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Amycolatopsis rifamycinica].
ACCESSION   WP_235191166
VERSION     WP_235191166.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis rifamycinica
  ORGANISM  Amycolatopsis rifamycinica
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
REFERENCE   1  (residues 1 to 441)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Amycolatopsis rifamycinica"
                     /db_xref="taxon:287986"
     Protein         1..441
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=46066
     Region          15..431
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mieqlqewvr grdlvgelad wislpsvsrt gegmteaaah glgllrasgl daravetggw
       61 paligtadgp gphvliyghy dvqpagplel wttppfepti rdgrmygrgt gdnkgqnlaq
      121 llglralrdl tggfpcrvtv lldgeeeigs pnlatavrev grpdlvvwsd gpvhdsgrac
      181 vvlgmrgilm felrarganr plhsghwggv apnpawalvq llatmrtadg tvtvpgfadd
      241 vapltdgqra aladlpvdva gtldaigatg meppaglgfh erlvvptltv nslscedsgd
      301 hravipdvai arcearlvag qtpaqvaeal rrhvakyapd vefvpdaava psttlpetpy
      361 tatilqaved alghrpllvp siggslpiav lsdglacpcy gvplanvdea nhapdenldl
      421 dwfhrgivaa atiqlalaah a
//
LOCUS       WP_235191207             106 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_235191207
VERSION     WP_235191207.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..106
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=12209
     Region          5..103
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mqrlqrasli lvnhqqelll iqrfqndrhy wvfpggsvev geqpveaakr eaetslelnr
       61 vqkvfeienq grletyflsy vgnskvklgv gpeqtrqsdv nqyhlk
//
LOCUS       WP_235191223             446 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: extracellular solute-binding protein
            [Corynebacterium].
ACCESSION   WP_235191223
VERSION     WP_235191223.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium
  ORGANISM  Corynebacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae.
REFERENCE   1  (residues 1 to 446)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 446)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 446)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 446)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Corynebacterium"
                     /db_xref="taxon:1716"
     Protein         1..446
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=47830
     Region          29..419
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 msavslatla agcgseaqqd sapvlrimgp adgsdqyaqa aqkcsdasgg kyrleydisa
       61 kqtddqrlql arrivggdss fdimgldvtw tpefaeagwa lplpedmaer vtegtlsgpl
      121 dtatwqdqly gaplntntql lwyrkslvdg ppktwddlia tgerladegk psmigvqaaq
      181 fegsvvwlns mtasaggqlv apdgqsvtia dndaaerals tmhrvatakg hdpsisqsde
      241 nqarlafdrg dafaqvnypf vyagakekae sgnqvakevf edmawttypa mdegtpaqvt
      301 igglnlavps tskhpelafe aidclrneqn qlnnalkggl pptlaklytq atdefkeeyp
      361 fyreiyeqln tleeadsael sqeerallps prtagvvtrp kspayqslsi lmasrisppe
      421 dvdakslvgt ldeelqaavn seglvp
//
LOCUS       WP_235191291             186 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ATP-binding cassette domain-containing protein
            [Corynebacterium].
ACCESSION   WP_235191291
VERSION     WP_235191291.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium
  ORGANISM  Corynebacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 186)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 186)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 186)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Corynebacterium"
                     /db_xref="taxon:1716"
     Protein         1..186
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=19643
     Region          1..169
                     /region_name="DppF"
                     /note="ABC-type dipeptide/oligopeptide/nickel transport
                     system, ATPase component [Amino acid transport and
                     metabolism, Inorganic ion transport and metabolism];
                     COG1124"
                     /db_xref="CDD:440741"
ORIGIN      
        1 mgrsgagkss lislltgqlc pdsgtvtmaq gpigyipqnp dttllphrpv idsicefatg
       61 dvramleslg lnpefayrrp helsggqrqr maiaraligk peliiadeaf saldrdtaam
      121 leevllstea tvllvshdis sllrlcnhii vmsageavfs gpvgelhktd ipevvellsa
      181 aeelas
//
LOCUS       WP_235191299             297 aa            linear   BCT 02-MAR-2025
DEFINITION  BamA/TamA family outer membrane protein [Vibrio parahaemolyticus].
ACCESSION   WP_235191299
VERSION     WP_235191299.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 297)
  AUTHORS   Heinz,E. and Lithgow,T.
  TITLE     A comprehensive analysis of the Omp85/TpsB protein superfamily
            structural diversity, taxonomic occurrence, and evolution
  JOURNAL   Front Microbiol 5, 370 (2014)
   PUBMED   25101071
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013283.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01103.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..297
                     /product="BamA/TamA family outer membrane protein"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /calculated_mol_wt=33143
     Region          <103..270
                     /region_name="BamA"
                     /note="Outer membrane protein assembly factor BamA [Cell
                     wall/membrane/envelope biogenesis]; COG4775"
                     /db_xref="CDD:443807"
ORIGIN      
        1 mtrllpivcl flseatlaea anqksemqel tsyqqyqawl enlllelgad gqfdpkkgid
       61 wsvmpgpfyt pekkfgigvs avglykpdin didsqpssit vngfgsinga ygvsinnany
      121 lnndkyrlfv daeltdspdv fhglgvdagm hnervnydrr sysasitgmt rvlpftylgl
      181 glsffhneas nakqenthip wigddfaefp stqrniggml nltydsrdfa lnaskgrlie
      241 leyqhfstel gsdndfervr lnysdyrsls sipgvlawqi rsesnfgdvs wdqmaml
//
LOCUS       WP_235191302             566 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase [Vibrio parahaemolyticus].
ACCESSION   WP_235191302
VERSION     WP_235191302.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..566
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=60046
     Region          136..485
                     /region_name="Peptidases_S8_S53"
                     /note="Peptidase domain in the S8 and S53 families;
                     cl10459"
                     /db_xref="CDD:415849"
     Site            order(238,318,433)
                     /site_type="active"
                     /db_xref="CDD:173787"
     Site            order(238,433)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:173787"
ORIGIN      
        1 mhhslslpil llssaivqaa vpeslaipqa yldshphpvh tapppayavd rilvkfrpga
       61 aasdvgelmr esrakslkvi sgidvhvlqv pvgtveaqla rfnqnpnvly aepdinhivq
      121 yvpneglggs iyasdyfseq walnntgqvh stvvndplfg pyldeasglp gadinapeaw
      181 dmtkgssavk iaildsgidc rmagdsvssi efgngkcveq qkfvtdyqsd tledvvghgt
      241 hvagiaaaqt dngigiagvg fnssvgnlkt cyeyliyscd pffgcflvaa tgvcplsssi
      301 daityaadng yhvinmsygs deideegnpi slvgysqaen davnyawgkg vllvsaagna
      361 gdpiknypaa ydnviavgat ddddnrasfs sfgsdwvslm apgdsilstm pneqcgtfdy
      421 dndaclhwqs gtsmasphva gaaallwayk yaeqlsdpat cqdasgvpcn qmirmmleqg
      481 adpigadgqd lqsisqygrl nlvgaltatp sepppppplv vkapealsis innsivflnw
      541 nylgdkdaia gfrvereswn akrnrw
//
LOCUS       WP_235191364             237 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-binding protein [Palleronia rufa].
ACCESSION   WP_235191364
VERSION     WP_235191364.1
KEYWORDS    RefSeq.
SOURCE      Palleronia rufa
  ORGANISM  Palleronia rufa
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Palleronia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13460.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Palleronia rufa"
                     /db_xref="taxon:1530186"
     Protein         1..237
                     /product="NAD(P)H-binding protein"
                     /calculated_mol_wt=25414
     Region          12..217
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(16,18..19,21,40..42,78..80,117..119,143,147,
                     166..169)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(95,119,143,147)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mrsgtmvdtl tlaifgaagk tgkqavrqav srghtvrave kswpdtddlp ervdrrtanv
       61 ieddlapaid gcdaviscig lpltagtals ppplytestk ryldamercg vsrivvisas
      121 fvvtrdrgpm afraaatval epiftqmgem erllrasavd wtavrpgwlm egdatgdatv
      181 tpeviapdli rtrhgdlaaf mldcveagdw ihrtpaigrk eaeeaesaar llreial
//
LOCUS       WP_235190825             642 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 44 protein [Amycolatopsis rifamycinica].
ACCESSION   WP_235190825
VERSION     WP_235190825.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis rifamycinica
  ORGANISM  Amycolatopsis rifamycinica
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
REFERENCE   1  (residues 1 to 642)
  AUTHORS   Ariza,A., Eklof,J.M., Spadiut,O., Offen,W.A., Roberts,S.M.,
            Besenmatter,W., Friis,E.P., Skjot,M., Wilson,K.S., Brumer,H. and
            Davies,G.
  TITLE     Structure and activity of Paenibacillus polymyxa xyloglucanase from
            glycoside hydrolase family 44
  JOURNAL   J Biol Chem 286 (39), 33890-33900 (2011)
   PUBMED   21795708
REFERENCE   2  (residues 1 to 642)
  AUTHORS   Kitago,Y., Karita,S., Watanabe,N., Kamiya,M., Aizawa,T., Sakka,K.
            and Tanaka,I.
  TITLE     Crystal structure of Cel44A, a glycoside hydrolase family 44
            endoglucanase from Clostridium thermocellum
  JOURNAL   J Biol Chem 282 (49), 35703-35711 (2007)
   PUBMED   17905739
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024295.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12891.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Amycolatopsis rifamycinica"
                     /db_xref="taxon:287986"
     Protein         1..642
                     /product="glycoside hydrolase family 44 protein"
                     /calculated_mol_wt=67659
     Region          91..325
                     /region_name="Glyco_hydro_44"
                     /note="Glycoside hydrolase family 44; pfam12891"
                     /db_xref="CDD:432857"
     Region          389..636
                     /region_name="CelA1"
                     /note="Cellulase/cellobiase CelA1 [Carbohydrate transport
                     and metabolism]; COG5297"
                     /db_xref="CDD:444099"
     Region          547..636
                     /region_name="CBM_2"
                     /note="Cellulose binding domain; cl21579"
                     /db_xref="CDD:451319"
ORIGIN      
        1 metarrwrkr ravtaaglat slvavtltap pvsaatgpal svdvsagrhp ispgiyglng
       61 gdpafnaeig qtvarwggna ssrynfknht yntgsdwyfe nivadqehsl egvveshldr
      121 gikpvvtvpl sgwvakdsps shpfacgfpa trfpqqdsfd qwdpncgngk ldqqnltgvp
      181 tdtsvpadaa fdgemvshlv srfgtaaqgg vpiyeldnep vlwssthrdv hpeavsddel
      241 gskgtaaaaa ikaadpsaav lgpsgwgyce wvasgvdgcg pgpdsaahgg lnlsqwylkn
      301 mkdysdahgg kryldyfdqh fypqisgdkt peanalrlrs vrslwdpayv eeswigpsgv
      361 napplqfirt mkswidryyp gtktaiteyn wgalddinga laeadilgvf gregldlatm
      421 wgepkptdpg ayafrmyrny dgagsrfgdv svsataadqg qlavyaaqrs adqaltvmvv
      481 nktggdltsp lsvagfdnag aaqrftyspa dlnaivrgsd vpasnghlda typansitll
      541 vlpaagctas vhvnggwatg hvatvtvtnd rrtaitgwrv gwtwpgdqqv tnswnttltq
      601 saarvvaada gwngpigagg sttfgfqatg tappptltct pa
//
LOCUS       WP_235191374              87 aa            linear   BCT 02-MAR-2025
DEFINITION  phage protein GemA/Gp16 family protein [Palleronia rufa].
ACCESSION   WP_235191374
VERSION     WP_235191374.1
KEYWORDS    RefSeq.
SOURCE      Palleronia rufa
  ORGANISM  Palleronia rufa
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Palleronia.
REFERENCE   1  (residues 1 to 87)
  AUTHORS   Abbes,C., Joseleau-Petit,D., Liebart,J.C., D'Ari,R. and Sezonov,G.
  TITLE     The GemA protein of phage Mu and the GyrB gyrase subunit of
            Escherichia coli: the search for targets and interactions leading
            to the reversion of Mu-induced mutations
  JOURNAL   Biochimie 83 (2), 261-267 (2001)
   PUBMED   11278077
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018011.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06252.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Palleronia rufa"
                     /db_xref="taxon:1530186"
     Protein         1..87
                     /product="phage protein GemA/Gp16 family protein"
                     /calculated_mol_wt=9306
     Region          <1..85
                     /region_name="GemA"
                     /note="Bacteriophage Mu, GemA protein; cl01815"
                     /db_xref="CDD:470357"
ORIGIN      
        1 mgvlawmglr plaktgpngg drpgmarfaq lepirvlwae wtkgagtadg lntwiertfh
       61 asslrfltkg qgrkaitalk amearaa
//
LOCUS       WP_235191383             363 aa            linear   BCT 02-MAR-2025
DEFINITION  FIST N-terminal domain-containing protein [Palleronia rufa].
ACCESSION   WP_235191383
VERSION     WP_235191383.1
KEYWORDS    RefSeq.
SOURCE      Palleronia rufa
  ORGANISM  Palleronia rufa
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Palleronia.
REFERENCE   1  (residues 1 to 363)
  AUTHORS   Borziak,K. and Zhulin,I.B.
  TITLE     FIST: a sensory domain for diverse signal transduction pathways in
            prokaryotes and ubiquitin signaling in eukaryotes
  JOURNAL   Bioinformatics 23 (19), 2518-2521 (2007)
   PUBMED   17855421
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020084.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08495.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Palleronia rufa"
                     /db_xref="taxon:1530186"
     Protein         1..363
                     /product="FIST N-terminal domain-containing protein"
                     /calculated_mol_wt=38443
     Region          4..353
                     /region_name="NosP"
                     /note="nitric oxide-sensing protein NosP; NF041558"
                     /db_xref="CDD:469443"
ORIGIN      
        1 maalarrfag tdlsqlflfv spradfdrva rdaarafpgc htvacstage igpdgyaeda
       61 iiavglpaah fatellvvpd laafdgaala drmvrtridl aaraqafptl fafalidgls
      121 rredalvaal apalghmslf ggstgdgraf grtrmavngd vldgaavvtl vatdcraqvf
      181 sldhltptet rmvvtaadpe trtvkeinaa paareyarvv grdpdqldtf afaahpvvvr
      241 lgdahhvrai qrvtpegdlv ffsaidegmv lsvarsedma ehlerelsal svhtapsdil
      301 gcdcilrrie aeegqqsrav sdvlarhrvv gfstygeqig pihinhtmtg valyppaagg
      361 rrp
//
LOCUS       WP_235191216             426 aa            linear   BCT 02-MAR-2025
DEFINITION  MipA/OmpV family protein [Vibrio parahaemolyticus].
ACCESSION   WP_235191216
VERSION     WP_235191216.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 426)
  AUTHORS   Vollmer,W., von Rechenberg,M. and Holtje,J.V.
  TITLE     Demonstration of molecular interactions between the murein
            polymerase PBP1B, the lytic transglycosylase MltA, and the
            scaffolding protein MipA of Escherichia coli
  JOURNAL   J Biol Chem 274 (10), 6726-6734 (1999)
   PUBMED   10037771
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018352.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06629.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..426
                     /product="MipA/OmpV family protein"
                     /calculated_mol_wt=49047
     Region          5..228
                     /region_name="MipA"
                     /note="MltA-interacting protein MipA; cl46400"
                     /db_xref="CDD:480740"
ORIGIN      
        1 mmlplaaavs tayatdeqtw giaamyrtas ipfytandds tvstfvpmmf fenehlying
       61 leggaflfne edsdwrvsai trlrfvdipk svqnafegdr vdfggqlryd fnenwraeve
      121 lmtddefqfh snyriaanye lgdwefepsf tirykdsdfn seyyafkdvt gerigagada
      181 nlgikaryhv isnlyllget svtrldneay ksgivedryq gevfvgfgff ndkgkerksd
      241 lhnrpylria hgratpsnmg difkfnaekd eydnqltsff yghpltdelf glpldiyltp
      301 glvhhwssdv qsssteyvma ikayytfnwp tqwrfgvaeg msyidnityi egtemeekgy
      361 tpsnllnyld fsldvnvgdl fnqkdwdnmw vgyslhhrsa ifenasqfgr ikggsnynti
      421 yfqyef
//
LOCUS       WP_235191416             230 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Palleronia rufa].
ACCESSION   WP_235191416
VERSION     WP_235191416.1
KEYWORDS    RefSeq.
SOURCE      Palleronia rufa
  ORGANISM  Palleronia rufa
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Palleronia.
REFERENCE   1  (residues 1 to 230)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Palleronia rufa"
                     /db_xref="taxon:1530186"
     Protein         1..230
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=24036
     Region          37..205
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(51..52,54..55,58,62,64..70,153..158,164..165,
                     167..168)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176102"
ORIGIN      
        1 maltvagerf fpgaervlaa hdetlasirq dglrgsivfg cpedyltaff pdllrrygav
       61 hpgveievis aptielrpll qrrridlalv sqpgsagpie virheplvwi astdaptlle
      121 eptlpialsa pgsidhiear caldassrpy rvshasngla gllaiarsgl aisvatraav
      181 pgelsivtrg lpplpeigis layasvglcc aktvnpglpl spdalipqal
//
LOCUS       WP_235191577             884 aa            linear   BCT 02-MAR-2025
DEFINITION  phospholipase effector Tle1 domain-containing protein [Vibrio
            parahaemolyticus].
ACCESSION   WP_235191577
VERSION     WP_235191577.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 884)
  AUTHORS   Hu,H., Zhang,H., Gao,Z., Wang,D., Liu,G., Xu,J., Lan,K. and Dong,Y.
  TITLE     Structure of the type VI secretion phospholipase effector Tle1
            provides insight into its hydrolysis and membrane targeting
  JOURNAL   Acta Crystallogr D Biol Crystallogr 70 (Pt 8), 2175-2185 (2014)
   PUBMED   25084336
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021508.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09994.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..884
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..884
                     /product="phospholipase effector Tle1 domain-containing
                     protein"
                     /calculated_mol_wt=99035
     Region          125..248
                     /region_name="MIX_V"
                     /note="Marker for type sIX effectors domain, clan V;
                     cd20709"
                     /db_xref="CDD:410950"
     Region          274..325
                     /region_name="LysM"
                     /note="Lysin Motif is a small domain involved in binding
                     peptidoglycan; cd00118"
                     /db_xref="CDD:212030"
     Region          398..685
                     /region_name="DUF2235"
                     /note="Uncharacterized alpha/beta hydrolase domain
                     (DUF2235); pfam09994"
                     /db_xref="CDD:462937"
ORIGIN      
        1 mpiefpkpkr ltsagyapvq ddvplapptp ipalepepva gfecrikiya pksdlsslkl
       61 gvfslsksds eesvrrwrse esldsarytv lagechveep kklthefhqn fgistsfevt
      121 prpidsgyfn aefipllpsl eiesklgwal hgfyyyfyeg kllyeldilg dgkwgwritq
      181 sssfdgisst pvsdhvfssl lvpvkvegkd pekqhilysr akltneqlse vsmawldena
      241 tlidtallvs slqqpllprd tpsdindtaa keiqthkvnm kdngqhesws diagyydlsp
      301 kellklnpsf eqdpmalrag dvliveksdv vdeaqetkes psplteikvg esyvlgntwg
      361 kynqpllsps mkhifelqgi sqttpvfnvk kveekilrig vffdgtgqnh lndlyketrg
      421 vksrtnvarl feiyplddns naiyvagvgt vdgawqtptl idegkdevdl aqafgvspnn
      481 lektwtfida aynlvaddtg afykwqnwtk qyfniiqslk dnqlfqgith iefdvfgfsr
      541 gaalarhfvn avkdglpdyd kprdgesfgd vfpnllahqd dvssqskhgy ypdetrtcsv
      601 rfvglfdtvg sfylagnnde gnfelgldtr caervfqisa hheyrknfpl tsllpsdgil
      661 psnfyeevfa gchtdigggy pskeqyakqg lperygmpla atynrelikt esirkdiqaq
      721 qnvygaaays erlykqaqda wnlecntkgl ygvvtlvngi lyyyelqpis nalsalpler
      781 mkqqakvagv nwddeklayp qdfnqlkgcd vvlktlnekl laqplgsiap thwqgeiiqy
      841 gkewihrphd alinagceta mdslvnavtk egnqlkrvvf dnev
//
LOCUS       WP_235191590             575 aa            linear   BCT 02-MAR-2025
DEFINITION  mechanosensitive ion channel domain-containing protein [Vibrio
            parahaemolyticus].
ACCESSION   WP_235191590
VERSION     WP_235191590.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 575)
  AUTHORS   Flegler,V.J., Rasmussen,A., Borbil,K., Boten,L., Chen,H.A.,
            Deinlein,H., Halang,J., Hellmanzik,K., Loffler,J., Schmidt,V.,
            Makbul,C., Kraft,C., Hedrich,R., Rasmussen,T. and Bottcher,B.
  TITLE     Mechanosensitive channel gating by delipidation
  JOURNAL   Proc Natl Acad Sci U S A 118 (33) (2021)
   PUBMED   34376558
REFERENCE   2  (residues 1 to 575)
  AUTHORS   Lai,J.Y., Poon,Y.S., Kaiser,J.T. and Rees,D.C.
  TITLE     Open and shut: crystal structures of the dodecylmaltoside
            solubilized mechanosensitive channel of small conductance from
            Escherichia coli and Helicobacter pylori at 4.4 A and 4.1 A
            resolutions
  JOURNAL   Protein Sci 22 (4), 502-509 (2013)
   PUBMED   23339071
REFERENCE   3  (residues 1 to 575)
  AUTHORS   Zhang,X., Wang,J., Feng,Y., Ge,J., Li,W., Sun,W., Iscla,I., Yu,J.,
            Blount,P., Li,Y. and Yang,M.
  TITLE     Structure and molecular mechanism of an anion-selective
            mechanosensitive channel of small conductance
  JOURNAL   Proc Natl Acad Sci U S A 109 (44), 18180-18185 (2012)
   PUBMED   23074248
REFERENCE   4  (residues 1 to 575)
  AUTHORS   Pliotas,C., Ward,R., Branigan,E., Rasmussen,A., Hagelueken,G.,
            Huang,H., Black,S.S., Booth,I.R., Schiemann,O. and Naismith,J.H.
  TITLE     Conformational state of the MscS mechanosensitive channel in
            solution revealed by pulsed electron-electron double resonance
            (PELDOR) spectroscopy
  JOURNAL   Proc Natl Acad Sci U S A 109 (40), E2675-E2682 (2012)
   PUBMED   23012406
REFERENCE   5  (residues 1 to 575)
  AUTHORS   Kloda,A. and Martinac,B.
  TITLE     Structural and functional differences between two homologous
            mechanosensitive channels of Methanococcus jannaschii
  JOURNAL   EMBO J 20 (8), 1888-1896 (2001)
   PUBMED   11296222
REFERENCE   6  (residues 1 to 575)
  AUTHORS   Kloda,A. and Martinac,B.
  TITLE     Molecular identification of a mechanosensitive channel in archaea
  JOURNAL   Biophys J 80 (1), 229-240 (2001)
   PUBMED   11159397
REFERENCE   7  (residues 1 to 575)
  AUTHORS   Martinac,B.
  TITLE     Mechanosensitive channels in prokaryotes
  JOURNAL   Cell Physiol Biochem 11 (2), 61-76 (2001)
   PUBMED   11275684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013117.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00924.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..575
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=65503
     Region          <62..572
                     /region_name="PRK11281"
                     /note="mechanosensitive channel MscK; cl46976"
                     /db_xref="CDD:481316"
ORIGIN      
        1 mfgnplkdsf ynsiivltvt ffassilpaf fftcvwfldf nwlfypsilf deimvascvl
       61 lwsvgflyhl srkqgmlelh frwskeicht ihhrirviml plfiillsfy ffrlvaqehd
      121 aeimrilylf viallfilyk sllnlgdvna hlpaffqsgv gfyviyysvi gsffvvaama
      181 mlglyvgswk ililqqlnvf aligvflvyq lgerwlileq rqlsyqrfla kreekiaren
      241 egvsedtsil daeeqgldke siseqsmtll kglslillvt vlstiwssql eltnwmddvv
      301 lwqasptann gvevvditlk slmyallalv isfvsirnip gllellvlrr mslapgtgyt
      361 ittllryiil mlgiviaftt igiewdrlqw liaaigvglg fglqeifanf isglillfer
      421 pirigdtvti ndlsgtvski qtrsttiidw dnkeivvpnk vfitdklinw sltdsvtrvv
      481 ipigvaygsd vdlveellyr avedtslvls vpaprvyflt fgdsslefel rlhinsiddr
      541 lptlhlvnkk inrlfkendi eiafpqidvh ikrse
//
LOCUS       WP_235191636             251 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3218 family protein [Pseudomonas aeruginosa].
ACCESSION   WP_235191636
VERSION     WP_235191636.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022944.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11508.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..251
                     /product="DUF3218 family protein"
                     /calculated_mol_wt=27082
     Region          40..251
                     /region_name="DUF3218"
                     /note="Protein of unknown function (DUF3218); pfam11508"
                     /db_xref="CDD:402901"
ORIGIN      
        1 milssslqna wksepsiwqy pstmsnedmd mnnavsetqq iniyqnpgqs isglykglan
       61 qcspgqpfpe vqlveawdip lvlhpefvpn gdvskidkey gtilaaesaq villqlqmaq
      121 dkakacgevt alissvssnl ntiksrhgan ylnllkqspn ryptsvgvei msggspnqds
      181 gievsygasl grltqsqlqs mnlpaslkql ltqgigvkls qpeywpaynn iaagiryttg
      241 vaitlaywat v
//
LOCUS       WP_235191674             231 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_235191674
VERSION     WP_235191674.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>231
                     /product="Ig-like domain-containing protein"
     Region          <1..>231
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 nwsftpgsql pngtvvnvta sdaagntslp atttvdsslp sipqvdpsng svisgtadag
       61 ntiiitdgng npigqvtadg sgnwsftpgi plpdgtvvnv varspsnvds apavitvdgv
      121 apaapvidps ngteisgtae agatviltdg ggnpigqata dgsgnwtftp gtplangtvi
      181 navaqdpagn tsgpasvtvd aiappapvid psngvvisgt aeagatvilt d
//
LOCUS       WP_235191676             114 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_235191676
VERSION     WP_235191676.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>114
                     /product="Ig-like domain-containing protein"
     Region          <1..>114
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 sgnwsftpgt plangtvina vaqdpagnts gptsttvdav apatpvvnps ngsviagtae
       61 agatviltdg ggnpigqata dgsgnwsftp gtplangtvv navaqdaagn tsgp
//
LOCUS       WP_235191697              25 aa            linear   BCT 02-MAR-2025
DEFINITION  putative holin-like toxin [Leuconostoc falkenbergense].
ACCESSION   WP_235191697
VERSION     WP_235191697.1
KEYWORDS    RefSeq.
SOURCE      Leuconostoc falkenbergense
  ORGANISM  Leuconostoc falkenbergense
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Leuconostoc.
REFERENCE   1  (residues 1 to 25)
  AUTHORS   Rajesh,T., Anthony,T., Saranya,S., Pushpam,P.L. and Gunasekaran,P.
  TITLE     Functional characterization of a new holin-like antibacterial
            protein coding gene tmp1 from goat skin surface metagenome
  JOURNAL   Appl Microbiol Biotechnol 89 (4), 1061-1073 (2011)
   PUBMED   20927512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16935.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..25
                     /organism="Leuconostoc falkenbergense"
                     /db_xref="taxon:2766470"
     Protein         1..25
                     /product="putative holin-like toxin"
                     /calculated_mol_wt=2657
     Region          <1..25
                     /region_name="Hol_Tox"
                     /note="Putative Holin-like Toxin (Hol-Tox); pfam16935"
                     /db_xref="CDD:435666"
ORIGIN      
        1 mlgfgtfvlv liglvvelik nqqkk
//
LOCUS       WP_235191760             398 aa            linear   BCT 02-MAR-2025
DEFINITION  FG-GAP-like repeat-containing protein [Paenibacillus sp. FSL
            R7-277].
ACCESSION   WP_235191760
VERSION     WP_235191760.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL R7-277
  ORGANISM  Paenibacillus sp. FSL R7-277
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13517.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Paenibacillus sp. FSL R7-277"
                     /db_xref="taxon:1227352"
     Protein         1..398
                     /product="FG-GAP-like repeat-containing protein"
                     /calculated_mol_wt=43909
     Region          <4..>229
                     /region_name="RGL11"
                     /note="Rhamnogalacturonan lyase of the polysaccharide
                     lyase family 11; cd10318"
                     /db_xref="CDD:199906"
ORIGIN      
        1 mllgdldgdg raelllvqpd nrqdvryiph qvqcltaynl dgrllwqtgk pdsnagsqgs
       61 dypaqiadid gdgalevlcv mkdqlhileg atgkvkavhp lpakeahdci iianlsggsy
      121 psdiilkdry hqlwaldrdf rllwthqgnv ghypwvydld gdgrdevmag ydllsaegkl
      181 lwsckdledh adclwvgdvn gdgvpelvig gsvtvmydrn ghelwryegs vesqhlalgr
      241 frldlpglqi agldrlvred dgkglrgkda mflldqsgre lwkeerttdg wltiveavsr
      301 fwpdapdyil ayrrgeavlp alydgymniv aefaeqgyav hgdllgsgte qviiytdela
      361 avyagevlpl qaahpgqqlp qpkrlysstl ypggeval
//
LOCUS       WP_235191762            1181 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Paenibacillus sp. FSL R7-277].
ACCESSION   WP_235191762
VERSION     WP_235191762.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL R7-277
  ORGANISM  Paenibacillus sp. FSL R7-277
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 1181)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1181
                     /organism="Paenibacillus sp. FSL R7-277"
                     /db_xref="taxon:1227352"
     Protein         1..1181
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=131354
     Region          25..>192
                     /region_name="NtrY"
                     /note="Signal transduction histidine kinase NtrY involved
                     in nitrogen fixation and metabolism regulation [Signal
                     transduction mechanisms]; COG5000"
                     /db_xref="CDD:444024"
     Region          138..254
                     /region_name="GAF_2"
                     /note="GAF domain; pfam13185"
                     /db_xref="CDD:433019"
     Region          <257..>493
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          409..724
                     /region_name="BaeS"
                     /note="Signal transduction histidine kinase [Signal
                     transduction mechanisms]; COG0642"
                     /db_xref="CDD:440407"
     Region          <470..1178
                     /region_name="PRK11107"
                     /note="hybrid sensory histidine kinase BarA; Provisional"
                     /db_xref="CDD:236848"
     Region          794..>922
                     /region_name="OmpR"
                     /note="DNA-binding response regulator, OmpR family,
                     contains REC and winged-helix (wHTH) domain [Signal
                     transduction mechanisms, Transcription]; COG0745"
                     /db_xref="CDD:440508"
ORIGIN      
        1 mitisflfme ggsrllaagl gaggilvsig llysigrnvd rglkqikeis qdiaadrlnp
       61 aaaatvrtde fgqlaasffr laadlhhrta derelrlrae eqawintqvs emalllqgsv
      121 qlrtasrvfi grlatavggs ygavylkqgg qlnfaagyaf ddsagqqesi plgsglvgqc
      181 aldgqmivlq dlpehyikvr sslgeaapas liivpikheq eivavmelaa lrpfsskemq
      241 liertgqnmg vlintladva riedllsetq lqkdeleaqt eeltaqtqel eaqteelmaq
      301 teelrlqtdq lqdqktelea qseslltsne qlqtqmklte aqkdeieaqt eelrqqteel
      361 hasnlelqnq meisrrqtme ikaqadeisa anrdmqkqlq itemqkseia dqaeelqaqt
      421 selleqkeql qaqteelqsq teelqaqtdt lqtqadelli qkeelaashd qlllqvelte
      481 kqkeeiqaqa qeifmaaqyk seflanvshe lrtplnslli lsqilaenkd gnleakqley
      541 vhtifsagkd llqlideild laklevgkmt pviepvspqd lsnhvfrhfe qqakkknlrf
      601 dvhsdnrlpd ylmtdghrlq qvlnnllsna ikftpeqgsv slsirtsgee aifavsdtgi
      661 giaasklesi feafqqadgt tsrkyggtgl glticrelat llggrievds vegkgstfsl
      721 iipavepged aqtlaaaays aaaspeipas epirrenpaf resfvpdisi snpkllqyae
      781 mdddrsnlls gditlliiee daefaarlle larsrgfkai vafqgdqgla lahaykpdai
      841 lldlhlpvld gwsiisrlks rpelrhipvh vistaeenqq slsmgalsfw kkpndyaele
      901 aaflqietyi rrpvkslliv ednkvlrgsl vefiahpdvn iiavgtgrea mehlashhfd
      961 cmvldlglsd isgfdlleqv ktnrklqtlp viiytgkdls ktdeqrlkhy aesiviknvr
     1021 smerlyddta lylhrkhadl pldkqrlien lhnpesafag ksillvdddm rnifalssvl
     1081 egynmeisfa qngrealehl ethpgvelif mdimmpemdg yetmkhirln pdydqiviia
     1141 ltaraleedr vkcleagasd yiskpinttq lvrvlklwli q
//
LOCUS       WP_235191776              84 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding enzyme [Paenibacillus sp. FSL R7-277].
ACCESSION   WP_235191776
VERSION     WP_235191776.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL R7-277
  ORGANISM  Paenibacillus sp. FSL R7-277
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024591.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13193.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Paenibacillus sp. FSL R7-277"
                     /db_xref="taxon:1227352"
     Protein         1..84
                     /product="AMP-binding enzyme"
                     /calculated_mol_wt=8965
     Region          <2..81
                     /region_name="MenE/FadK"
                     /note="O-succinylbenzoic acid-CoA ligase MenE or related
                     acyl-CoA synthetase (AMP-forming) [Lipid transport and
                     metabolism]; COG0318"
                     /db_xref="CDD:440087"
ORIGIN      
        1 maisahpsil eaavvgmplp degeevtavv ilkdkqtlal edlqqfcgqs iaeyklptrl
       61 vitqslarts vgkidkkaik dsiy
//
LOCUS       WP_235191791             487 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase [Paenibacillus sp. FSL R7-277].
ACCESSION   WP_235191791
VERSION     WP_235191791.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL R7-277
  ORGANISM  Paenibacillus sp. FSL R7-277
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014237.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02156.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Paenibacillus sp. FSL R7-277"
                     /db_xref="taxon:1227352"
     Protein         1..487
                     /product="glycosyl hydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /calculated_mol_wt=53970
     Region          30..330
                     /region_name="Glyco_hydro_26"
                     /note="Glycosyl hydrolase family 26; cl21700"
                     /db_xref="CDD:473934"
     Region          346..483
                     /region_name="PA14"
                     /note="PA14 domain; pfam07691"
                     /db_xref="CDD:400161"
ORIGIN      
        1 mlpwgegrsl padakvttla spaaapikpi npsaskeasa llsylhdlsg kgmisgqhdy
       61 lespdefnnk lrtttgryav lhgyelgaig nqskatiakq rqavvdsair whkgggivam
      121 tfhqnlpgta pvwtnvqkpl sqnqfkqyvt pgtpqykali aeldevakyl gelrdagvpv
      181 lwrpyhemng gwfwwgqkdd fvklwdlvyd rmvnthklnn llwvwnpnap nkssepyaay
      241 fpgtakvdil aadiydndfk qsyydsllkl adgkpigige sgelpdpvim sqkqskwvyt
      301 mtwgkmlven nptvkiqsfm nhkytvsred yklaagakth aaavssrngl rgqyygnmdl
      361 sgtplltrnd stiqfnwhgn spasglpkds fsvrwtgtlk plysekytft assddgirvw
      421 iggkllidsw knqssaskeg sitlsagtpy aikveyyenr gdasvslmwr sqsqkqmiip
      481 qsaltlp
//
LOCUS       WP_235191813             888 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase [Paenibacillus sp. FSL R7-277].
ACCESSION   WP_235191813
VERSION     WP_235191813.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL R7-277
  ORGANISM  Paenibacillus sp. FSL R7-277
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025938.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14587.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Paenibacillus sp. FSL R7-277"
                     /db_xref="taxon:1227352"
     Protein         1..888
                     /product="glycoside hydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /calculated_mol_wt=98742
     Region          44..408
                     /region_name="Glyco_hydro_30"
                     /note="Glycosyl hydrolase family 30 TIM-barrel domain;
                     cl23815"
                     /db_xref="CDD:451560"
     Region          613..886
                     /region_name="GH43_Bt3655-like"
                     /note="Glycosyl hydrolase family 43 protein such as
                     Bacteroides thetaiotaomicron VPI-5482 arabinofuranosidase
                     Bt3655; cd08983"
                     /db_xref="CDD:350097"
ORIGIN      
        1 mkrlaamavt gvvlacvvvi lfsnrkeeei pvqhqkppda avtidgnvry qtidnfgasd
       61 awsmdplgke wteenknkva dllfsrtegi glsawrfnig agsvetdqai ipdpwrrtea
      121 fkiteeapyd wsrqagqqwf lraakergve sliafvnspp vwmtrnghaq pdpevgssnl
      181 kegseaafas flievlehfk qegleydyis pvneptwdwn haqqeasryn nddlkrvile
      241 lhaqlrasgl eaqisapdgv eitsllddeh yreftgsgvy ssganslglg kyreyikdll
      301 gdpvlkeavg nkiashsyws dyshsgddrl vklrrllern lkqydpqaky wvteycimgd
      361 ygpgrdlgme palqvartih fdlteadaaa wqwwtavskv dykdgllytd ytqpgdeqni
      421 ltskilwslg nyskfirpga vrialsglsq eagsellgsa yvheeeqsmt avlvndslee
      481 krvqltlsgl glkasdlrsy vtnaqldlar gedvaadvav dgtadgeqvf qalipaksvv
      541 tlvaggpele eeasqpgeva gtqatgtqaa qdipaavdya gylftyftge gigdgeqvyf
      601 alsegndplh wkelnsgkpv lrsslgnkgv rdpfiirspe ggqfyliatd lkingnwdwg
      661 aaqtqgsrsi ivwesdnlvd wsepweakvs peeagntwap eviydqesre yivfwasrmy
      721 adsahtgday qtilysktrd fraftepqvy mdygysiidt tmaayngkiy rftkdereqg
      781 tespfgkmvf qesldsvfap evkllsgsvg glkgiegptl fksntekkwy lfvdefggrg
      841 yipletedld sgkwtvstdy elpssprhgt vipvtrreyd alnakfrq
//
LOCUS       WP_235191833             410 aa            linear   BCT 02-MAR-2025
DEFINITION  YbfB/YjiJ family MFS transporter [Paenibacillus sp. FSL R7-277].
ACCESSION   WP_235191833
VERSION     WP_235191833.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL R7-277
  ORGANISM  Paenibacillus sp. FSL R7-277
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018485.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06779.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Paenibacillus sp. FSL R7-277"
                     /db_xref="taxon:1227352"
     Protein         1..410
                     /product="YbfB/YjiJ family MFS transporter"
                     /calculated_mol_wt=43190
     Region          24..384
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(34..35,38..39,42,74,124..125,127..129,132,147,
                     150..151,154,229,232..233,236..238,241,268,272,317..318,
                     322,326,346,349..350,353..354,357)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mrsknssdsn fnsaslpsfw pfvltgmlmi vtttgfarma yglvlpymqa glglsisqgg
       61 mlgtimflgy lasvglsgil avrwgskavl maggcavvis mfglsgsysf iwvalfmfla
      121 gggsalvftp lmslmlgqfp dkkgivlgml lsgagigmll sgflvpllta qfpvlgwrav
      181 wlgfgiislv vliaallilr npeivgsvke tdkpkwlknk almqvavlyf lvgiaylvpn
      241 lyqsgfmlae gisdraaglv yaiagifsia ggpvwgslsd rfgvnrmfil vwacaaagdi
      301 ipllnhsipg fvsssvlwgs sigglvtliq lkaakqvnpr yvptaigfis ifyavgqmlg
      361 pgmtgwmidh lggygvaygf gavvygfglv aslisgrkqk lleqskkikq
//
LOCUS       WP_235191860             570 aa            linear   BCT 02-MAR-2025
DEFINITION  RICIN domain-containing protein [Paenibacillus sp. FSL R7-277].
ACCESSION   WP_235191860
VERSION     WP_235191860.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL R7-277
  ORGANISM  Paenibacillus sp. FSL R7-277
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025563.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14200.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Paenibacillus sp. FSL R7-277"
                     /db_xref="taxon:1227352"
     Protein         1..570
                     /product="RICIN domain-containing protein"
                     /calculated_mol_wt=63244
     Region          <152..336
                     /region_name="BglC"
                     /note="Aryl-phospho-beta-D-glucosidase BglC, GH1 family
                     [Carbohydrate transport and metabolism]; COG2730"
                     /db_xref="CDD:442036"
     Region          427..564
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cd00161"
                     /db_xref="CDD:467293"
     Site            order(439..441,452,454,461..462)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(490..491,503,505,512..513)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(539..541,552,554,561..562)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
ORIGIN      
        1 mrkrklslsm kllvmlalll tpmqsgggta nawegspvpk lhvsgnqlvn ssgqpvllsg
       61 whqptgaywt yqnsnyylkr nggnrhkatl eylkeitdtf tntsgkygns hgwysnqvrl
      121 fidredmgdv aagtynfagl qaatqnliip yveyaktkgl yvtlgldftl ldnkattqan
      181 ldkfnqiwgy lasqpglksa dnvmfelvne pvlsdvngqw ggnpsqpnfa afwnslknfq
      241 nsmistirsk gadnviwasg lgwdqhyqlt asspltdpln nygyavhwyp gygaydnyns
      301 lqqiwdssik paadaypini tettwfknqp gdsaywdlfn gtnagfgknt kaiftaagnv
      361 siavhmngfl ldpgpkssfa dpdggllydg natrdgmarf ifewyyeraq fnpwngvwng
      421 vtnnakykli nrasgkaidv pngqntnalq lqqwpental aqqwtvtdmg tynniyrlrs
      481 vnssdnkvmd vrngtknnge aiqlmqdlnn taqqfrlikl sngngywsil nvnsnkavev
      541 tgastadgak lqqnlyrgdl hqqwklvqvn
//
LOCUS       WP_235191867              91 aa            linear   BCT 02-MAR-2025
DEFINITION  GH39 family glycosyl hydrolase [Paenibacillus sp. FSL R7-277].
ACCESSION   WP_235191867
VERSION     WP_235191867.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL R7-277
  ORGANISM  Paenibacillus sp. FSL R7-277
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013400.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01229.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Paenibacillus sp. FSL R7-277"
                     /db_xref="taxon:1227352"
     Protein         1..91
                     /product="GH39 family glycosyl hydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=10267
     Region          <5..90
                     /region_name="XynB"
                     /note="Beta-xylosidase [Carbohydrate transport and
                     metabolism]; COG3664"
                     /db_xref="CDD:442881"
ORIGIN      
        1 mkpfmevyit fkgdltgkqa tirvidefha npkakwleqg spvyptqhql qelfqaadmi
       61 stpvelkflp sgewilelav ephsvtaidi w
//
LOCUS       WP_235191938             430 aa            linear   BCT 02-MAR-2025
DEFINITION  NosD domain-containing protein, partial [Paenibacillus sp. FSL
            R7-277].
ACCESSION   WP_235191938
VERSION     WP_235191938.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL R7-277
  ORGANISM  Paenibacillus sp. FSL R7-277
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 430)
  AUTHORS   Holloway,P., McCormick,W., Watson,R.J. and Chan,Y.K.
  TITLE     Identification and analysis of the dissimilatory nitrous oxide
            reduction genes, nosRZDFY, of Rhizobium meliloti
  JOURNAL   J Bacteriol 178 (6), 1505-1514 (1996)
   PUBMED   8626275
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016906.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05048.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Paenibacillus sp. FSL R7-277"
                     /db_xref="taxon:1227352"
     Protein         1..>430
                     /product="NosD domain-containing protein"
     Region          27..396
                     /region_name="NosD_copper_fam"
                     /note="nitrous oxide reductase family maturation protein
                     NosD; TIGR04247"
                     /db_xref="CDD:275079"
ORIGIN      
        1 milgmlicsf nhgtivsadt stgvlplqpi idsaregdfi tlapgaysgp vrldkqvtin
       61 gngeaillht vkdeqaavli tadgvrlenl kiqqsndgea aavrveadrv tlkglvihsa
      121 gygillread ggvisdntis wfiptgeapg trgngidlyn shgavirgnd iaylrdgiyl
      181 ensrntvvdq nklaylrygv hcmyingskv tnntgeynit gamvmgvtgv vvsgnsfrkq
      241 srnvhsqgil lydvrnsaim nnrvegnrvg iymqqssdnk lqqnlvlrny igvqfenaeg
      301 nrferngfva nvieaqatgs rdnemngnyw dafggldltg dgvsdlkyai npfyqqlvtg
      361 naayqlffqs pgmtflsdmy tggsagwstd saplmqldag tvspdqaagg qgtvmvagwl
      421 llflsvitii
//
LOCUS       WP_235191943             547 aa            linear   BCT 02-MAR-2025
DEFINITION  dynamin family protein, partial [Paenibacillus sp. FSL R7-277].
ACCESSION   WP_235191943
VERSION     WP_235191943.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL R7-277
  ORGANISM  Paenibacillus sp. FSL R7-277
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 547)
  AUTHORS   Warnock,D.E. and Schmid,S.L.
  TITLE     Dynamin GTPase, a force-generating molecular switch
  JOURNAL   Bioessays 18 (11), 885-893 (1996)
   PUBMED   8939066
REFERENCE   2  (residues 1 to 547)
  AUTHORS   Obar,R.A., Collins,C.A., Hammarback,J.A., Shpetner,H.S. and
            Vallee,R.B.
  TITLE     Molecular cloning of the microtubule-associated mechanochemical
            enzyme dynamin reveals homology with a new family of GTP-binding
            proteins
  JOURNAL   Nature 347 (6290), 256-261 (1990)
   PUBMED   2144893
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012570.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00350.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Paenibacillus sp. FSL R7-277"
                     /db_xref="taxon:1227352"
     Protein         1..>547
                     /product="dynamin family protein"
     Region          <30..>92
                     /region_name="RsgA_GTPase"
                     /note="RsgA GTPase; pfam03193"
                     /db_xref="CDD:427191"
     Region          62..287
                     /region_name="DLP_2"
                     /note="Dynamin-like protein including dynamins,
                     mitofusins, and guanylate-binding proteins; cd09912"
                     /db_xref="CDD:206739"
     Site            68..75
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206739"
     Site            order(70..76,164,219..220,222,256..258)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206739"
     Site            95
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206739"
     Site            99..101
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206739"
     Site            161..164
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206739"
     Site            order(163..164,184..185)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206739"
     Site            219..222
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206739"
     Site            256..258
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206739"
ORIGIN      
        1 mkeaidrsgg gdvvgaerer vkqvtagssa lrlleerlrq wgeqksaqiv adlkvkeqad
       61 eltlafcghf sagkssmink lcgkavlpsg pvptsanivs irsgapqvll hpvdgstggn
      121 pgvikttpdr lqdycrqgte ysaievwedv pvlgnhgvlm dtpgvdstde ghqaatrsal
      181 hladavfyvm dynhvqsenn lafakslsdw gkplyliinq idkhreqeip leeyrqqves
      241 afrewgihsa gllftslkve ehplnqwkdl lavisglleq rqglleysls rsmhhtadav
      301 ladyreqqee eraalleeag gsaaeaveae iratmqeeas leelpeearl elrsrldall
      361 gntnlmpadl rdaagayies lqpgfrrglf ftaakrekeq garllhwhsl qqreitaqle
      421 whtlqlvrew aeglelwqee aeprlkqafp avsqqwladq vkpgtgasge allnfcrtla
      481 aeikaqfrra vlafgeplld alpplveerr aelarreaal rrqaaahaal aaldraaaar
      541 adalaal
//
LOCUS       WP_235191957             373 aa            linear   BCT 02-MAR-2025
DEFINITION  adenosylcobinamide amidohydrolase [Paenibacillus sp. FSL R7-277].
ACCESSION   WP_235191957
VERSION     WP_235191957.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL R7-277
  ORGANISM  Paenibacillus sp. FSL R7-277
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 373)
  AUTHORS   Woodson,J.D. and Escalante-Semerena,J.C.
  TITLE     CbiZ, an amidohydrolase enzyme required for salvaging the coenzyme
            B12 precursor cobinamide in archaea
  JOURNAL   Proc Natl Acad Sci U S A 101 (10), 3591-3596 (2004)
   PUBMED   14990804
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014060.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01955.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Paenibacillus sp. FSL R7-277"
                     /db_xref="taxon:1227352"
     Protein         1..373
                     /product="adenosylcobinamide amidohydrolase"
                     /calculated_mol_wt=38732
     Region          59..279
                     /region_name="CbiZ"
                     /note="Adenosylcobinamide amidohydrolase [Coenzyme
                     transport and metabolism]; COG1865"
                     /db_xref="CDD:441470"
ORIGIN      
        1 msknggsagc erakranrse rrgakdmkea kevqeakeak vklpfkaedg ektyrskvwp
       61 gltlewregh llvefpaead sissavyggg agrlkravnq yvsrdyecsn pvqdlenklq
      121 ewgyplegca glmtavpleh aavaeedtgs agifccvtaa agnaaragse rsvlaayrpg
      181 tinimlgidg wlsqsamvna imtateakaa aladlgirda englgatgtt tdaiviavsg
      241 srryaaehvy agtatdlgga igrlvysavt eslrsvkaaq sesraeaeal qavhgvnsea
      301 sqakqgvhag alqaahggha evsqvghgvq advlqeaygv qadvlqeayg vhaeasqdar
      361 saqphaaqsg gre
//
LOCUS       WP_235191989             311 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase [Paenibacillus sp. FSL R7-277].
ACCESSION   WP_235191989
VERSION     WP_235191989.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL R7-277
  ORGANISM  Paenibacillus sp. FSL R7-277
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 311)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 311)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Paenibacillus sp. FSL R7-277"
                     /db_xref="taxon:1227352"
     Protein         1..311
                     /product="phosphotransferase"
                     /calculated_mol_wt=34837
     Region          16..303
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(16..18,21,23,34,36,67,91..94,196,200..201,203,
                     216..217)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270702"
ORIGIN      
        1 msqvwpewkg tlrkrsggwn nttyfvesge rravlriydt hkdrnkiefe htvllklaaa
       61 glpfstplpi rtasgetlvq leesgkfacl fayiegesps gqaadyyesf geaagilsaa
      121 laeidtgips vyrpyyelrt syplctreal hdlvtdppes lkellpeltl lvdaydnvad
      181 sleqlqslph qlvhgdlnas nllvdgadta rvtalldfef ctrdvrvmda avilsallsh
      241 edseriirdf wrgynrrvtl tpeelaaipv lmllrkidvf lhfatryweg tdeenvlqqq
      301 vrelaaevaa m
//
LOCUS       WP_235192010             525 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: extracellular solute-binding protein [Paenibacillus].
ACCESSION   WP_235192010
VERSION     WP_235192010.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus
  ORGANISM  Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae.
REFERENCE   1  (residues 1 to 525)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 525)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 525)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 525)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Paenibacillus"
                     /db_xref="taxon:44249"
     Protein         1..525
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=58434
     Region          54..>416
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mnksrsfkiv aaalsmavvl sacggnggnt gqpapsgspd aaaggnapak pgqvkelslf
       61 idaswypvte wkgpvadmit ektgvklkvt vatddkqlpl miasgdlpdl vftssnidrl
      121 sdsklsyswn eliekyapdf kidktriaih tmddgkfytv rnsfatqeem knskyslgsd
      181 gnpgiavred ilkelgnppi ktlddfvkvl gmvkekypem vplimdkdwi eqyflaqfgt
      241 etlldgwyeq dgkveyairq pkmldffkfm nslyrngyil aenfalandq iddqyatggk
      301 afahshtvst adtdnikiks nqgnfsfkml psvlskdakv vssglgfsgt fitkknkdpe
      361 asikflqyla sdegkkltmf gvegvhwtwn eeghpdfkyn psdadfvnsn gikwwylynd
      421 gvtegmlsyv pelqktqalm elkavriykp elgliqtqpd sqektiktki demvknekvk
      481 iylaeseeaa vaayenmlkn aeniglqklt dwanatyqkk kelfk
//
LOCUS       WP_235191991             304 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ABC transporter substrate-binding protein
            [unclassified Paenibacillus].
ACCESSION   WP_235191991
VERSION     WP_235191991.1
KEYWORDS    RefSeq.
SOURCE      unclassified Paenibacillus
  ORGANISM  unclassified Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 304)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 304)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="unclassified Paenibacillus"
                     /db_xref="taxon:185978"
     Protein         1..304
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=33175
     Region          34..282
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(113..114,117,141)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238347"
ORIGIN      
        1 mailltgcsk qnsgrpgnta dhsqdkrils tvkgdvevpa hpsrvvvdwn igdvlavglt
       61 pvgvpgslld ygeflrkple gvedignhne vslekiiqln pdliitwnqe tyeaysriap
      121 tvvfiaddyd smqaevsamg eilnrqeeaq kwnksfgert qaarakaqaa vpagatftit
      181 dfnwlksvgi vgksanrggk avyellgltp aekvktelfd qnkesieiss evfgqyvgdy
      241 llvmktvgas detlpgiwse ldavrngqvy eldihqylss dpytsilqae diaerlaskq
      301 tmlk
//
LOCUS       WP_235192164             272 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ThiF family adenylyltransferase [Pectobacterium].
ACCESSION   WP_235192164
VERSION     WP_235192164.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium
  ORGANISM  Pectobacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae.
REFERENCE   1  (residues 1 to 272)
  AUTHORS   Lee,I. and Schindelin,H.
  TITLE     Structural insights into E1-catalyzed ubiquitin activation and
            transfer to conjugating enzymes
  JOURNAL   Cell 134 (2), 268-278 (2008)
   PUBMED   18662542
REFERENCE   2  (residues 1 to 272)
  AUTHORS   Lois,L.M. and Lima,C.D.
  TITLE     Structures of the SUMO E1 provide mechanistic insights into SUMO
            activation and E2 recruitment to E1
  JOURNAL   EMBO J 24 (3), 439-451 (2005)
   PUBMED   15660128
REFERENCE   3  (residues 1 to 272)
  AUTHORS   Lake,M.W., Wuebbens,M.M., Rajagopalan,K.V. and Schindelin,H.
  TITLE     Mechanism of ubiquitin activation revealed by the structure of a
            bacterial MoeB-MoaD complex
  JOURNAL   Nature 414 (6861), 325-329 (2001)
   PUBMED   11713534
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013094.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00899.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Pectobacterium"
                     /db_xref="taxon:122277"
     Protein         1..272
                     /product="ThiF family adenylyltransferase"
                     /GO_function="GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /calculated_mol_wt=28779
     Region          7..>117
                     /region_name="ThiF"
                     /note="Molybdopterin or thiamine biosynthesis
                     adenylyltransferase [Coenzyme transport and metabolism];
                     COG0476"
                     /db_xref="CDD:440244"
     Region          17..>222
                     /region_name="PRK05597"
                     /note="molybdopterin biosynthesis protein MoeB; Validated"
                     /db_xref="CDD:235526"
ORIGIN      
        1 mldrteilsr dlsgvaqkle gahvvcvgvg slgstvalql arsgvghltl idpdhlvsan
       61 lgrhvlgadd lglskakalq eqirkdlptt evtafatfae vvmyknpevf dkadlvvvtt
      121 adwqsevalw gaksngvswg llqawsepht qvghallaps gafdarglft dngdfkhkft
      181 ewpeggvval pacgesfipg gslgmvnias mvsqtalrvl sgnidspswv ssinrpndvv
      241 tlggkylgpd lpagiqqaql erhwpetler gk
//
LOCUS       WP_235191728             183 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: papain-like cysteine protease family protein
            [unclassified Paenibacillus].
ACCESSION   WP_235191728
VERSION     WP_235191728.1
KEYWORDS    RefSeq.
SOURCE      unclassified Paenibacillus
  ORGANISM  unclassified Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 183)
  AUTHORS   Shindo,T. and Van der Hoorn,R.A.
  TITLE     Papain-like cysteine proteases: key players at molecular
            battlefields employed by both plants and their invaders
  JOURNAL   Mol Plant Pathol 9 (1), 119-125 (2008)
   PUBMED   18705889
REFERENCE   2  (residues 1 to 183)
  AUTHORS   Mudgett,M.B. and Staskawicz,B.J.
  TITLE     Characterization of the Pseudomonas syringae pv. tomato AvrRpt2
            protein: demonstration of secretion and processing during bacterial
            pathogenesis
  JOURNAL   Mol Microbiol 32 (5), 927-941 (1999)
   PUBMED   10361296
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023802.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12385.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="unclassified Paenibacillus"
                     /db_xref="taxon:185978"
     Protein         1..183
                     /product="papain-like cysteine protease family protein"
                     /calculated_mol_wt=19238
     Region          33..170
                     /region_name="Peptidase_C70"
                     /note="Papain-like cysteine protease AvrRpt2; pfam12385"
                     /db_xref="CDD:403550"
ORIGIN      
        1 mklkslsilf ssiisaslfa gsvyaasgar ihdvtsqvqq gsylcwaavs smagqylgks
       61 satqqnivka akgiymdtag tvydaqagla aygvsssasl svpsynslvs nidtysnvla
      121 ftskagssig hafvvkgyyy nttnniqnly yidpadgssn vqgystfksn stykwvntvn
      181 nin
//
LOCUS       WP_235192201             632 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramoyl-L-alanine amidase [Cytobacillus firmus].
ACCESSION   WP_235192201
VERSION     WP_235192201.1
KEYWORDS    RefSeq.
SOURCE      Cytobacillus firmus
  ORGANISM  Cytobacillus firmus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Cytobacillus.
REFERENCE   1  (residues 1 to 632)
  AUTHORS   Cheng,X., Zhang,X., Pflugrath,J.W. and Studier,F.W.
  TITLE     The structure of bacteriophage T7 lysozyme, a zinc amidase and an
            inhibitor of T7 RNA polymerase
  JOURNAL   Proc Natl Acad Sci U S A 91 (9), 4034-4038 (1994)
   PUBMED   8171031
REFERENCE   2  (residues 1 to 632)
  AUTHORS   Wang,X., Wilkinson,B.J. and Jayaswal,R.K.
  TITLE     Sequence analysis of a Staphylococcus aureus gene encoding a
            peptidoglycan hydrolase activity
  JOURNAL   Gene 102 (1), 105-109 (1991)
   PUBMED   1677905
REFERENCE   3  (residues 1 to 632)
  AUTHORS   Potvin,C., Leclerc,D., Tremblay,G., Asselin,A. and Bellemare,G.
  TITLE     Cloning, sequencing and expression of a Bacillus bacteriolytic
            enzyme in Escherichia coli
  JOURNAL   Mol Gen Genet 214 (2), 241-248 (1988)
   PUBMED   3070348
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013661.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01510.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Cytobacillus firmus"
                     /db_xref="taxon:1399"
     Protein         1..632
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /EC_number="3.5.1.28"
                     /GO_function="GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=69883
     Region          49..>172
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
     Region          258..413
                     /region_name="AmpD"
                     /note="N-acetyl-anhydromuramyl-L-alanine amidase AmpD
                     [Cell wall/membrane/envelope biogenesis]; COG3023"
                     /db_xref="CDD:442259"
ORIGIN      
        1 mrfkklssai ltlsltasll aipadftpsa tsaastensi eshhlqkafe kaakefgvpe
       61 svllavaynq srwehheghs evggygimnl adlpadmsar gkhddgiiea sdnenstlkt
      121 aanllnenpe alkkdpeqni ragaallaef arqttgelps daadwygavv kysgtdqevi
      181 akdfadqvfe tiqqgaarkn ldgqrvvlna keitpnktta gtiplrntky tntdcpngld
      241 ctfipaaykq fssstsnygn ydianrpkdd ldiryiiihd iegtaesais hfqnpsyvsa
      301 hyvidsetgk itqmvrpedv pwhagnwyfn mhsigleheg yaaegadwys eqmyrstakl
      361 vrylsdrfni pldrqhiigh deipglttak hrsmhwdpga ywdwghffdl lgasfnpssg
      421 dkdsniltir pnfntnqpdf tyrgikqepe ssslihlyse psfeaplvsd pllhpggtst
      481 knindwgnka aigqsfykag qegdwtaiyy ggqeawfynp nnrnsvpgsg tlitpkegld
      541 sipvygaayp ddaaydeagi aesargkaqv lyqmpagqiy tatepiqsdy yhakyyndpa
      601 tnkvvkgnde yyqifynhrl gfvkksdvev vn
//
LOCUS       WP_235192230             129 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3231 family protein [Cytobacillus firmus].
ACCESSION   WP_235192230
VERSION     WP_235192230.1
KEYWORDS    RefSeq.
SOURCE      Cytobacillus firmus
  ORGANISM  Cytobacillus firmus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Cytobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022986.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11553.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Cytobacillus firmus"
                     /db_xref="taxon:1399"
     Protein         1..129
                     /product="DUF3231 family protein"
                     /calculated_mol_wt=14172
ORIGIN      
        1 mdlwtlytaf heahslyyia lnmttdpell htirssiegs rtdtkmiedf llkegvplpl
       61 tnaekplsnp dsvpegvklt ddeianlisv kiaasitfca qamiktvrtd vglmlfslqv
      121 hlmeiaspp
//
LOCUS       WP_235192260             357 aa            linear   BCT 02-MAR-2025
DEFINITION  Wadjet anti-phage system protein JetD domain-containing protein
            [Cytobacillus firmus].
ACCESSION   WP_235192260
VERSION     WP_235192260.1
KEYWORDS    RefSeq.
SOURCE      Cytobacillus firmus
  ORGANISM  Cytobacillus firmus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Cytobacillus.
REFERENCE   1  (residues 1 to 357)
  AUTHORS   Doron,S., Melamed,S., Ofir,G., Leavitt,A., Lopatina,A., Keren,M.,
            Amitai,G. and Sorek,R.
  TITLE     Systematic discovery of antiphage defense systems in the microbial
            pangenome
  JOURNAL   Science 359 (6379) (2018)
   PUBMED   29371424
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09983.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Cytobacillus firmus"
                     /db_xref="taxon:1399"
     Protein         1..357
                     /product="Wadjet anti-phage system protein JetD
                     domain-containing protein"
                     /calculated_mol_wt=42837
     Region          <203..356
                     /region_name="DUF2220"
                     /note="Uncharacterized protein conserved in bacteria
                     C-term(DUF2220); pfam09983"
                     /db_xref="CDD:462934"
ORIGIN      
        1 mnkiniietr vrsfiediqh pkqkkklnin dlefqlrkll ddyyemdgys lfyeaiqslq
       61 ddgqltpihn hqyngktpsl plyfwvnvka htgkwdrlem mkltdrfdfs fyerhpewqt
      121 keewsrirnl yaflqssger etvsleersl elfghekflq davsfpdgkg flarigvsee
      181 qlkvvkygep fvfwmkqgke indiqrvliv enlsffhtsi qllesdlldy epeliiygeg
      241 tkiersfsff fkifpaksyl fyyagdldaa gygimtrlld kypecciqpa lkiyrkmldc
      301 meqrneqksg qlqnlkyrea ffkwfteeeq ehllqlwqen kripqevlti etwrrwm
//
LOCUS       WP_235192261             686 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4179 domain-containing protein [Cytobacillus firmus].
ACCESSION   WP_235192261
VERSION     WP_235192261.1
KEYWORDS    RefSeq.
SOURCE      Cytobacillus firmus
  ORGANISM  Cytobacillus firmus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Cytobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025159.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13786.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Cytobacillus firmus"
                     /db_xref="taxon:1399"
     Protein         1..686
                     /product="DUF4179 domain-containing protein"
                     /calculated_mol_wt=79477
     Region          <102..157
                     /region_name="RpoE"
                     /note="DNA-directed RNA polymerase specialized sigma
                     subunit, sigma24 family [Transcription]; COG1595"
                     /db_xref="CDD:441203"
     Region          165..199
                     /region_name="zf-HC2"
                     /note="Putative zinc-finger; pfam13490"
                     /db_xref="CDD:463895"
     Region          249..328
                     /region_name="DUF4179"
                     /note="Domain of unknown function (DUF4179); pfam13786"
                     /db_xref="CDD:463985"
ORIGIN      
        1 miliipvknn pilpvtirvk giesiinwfe qqqrsfyavg waclgnqhki eelfyrvilk
       61 vrkevpkfks stffemrvls ifmevcrels vddsfkasgg siflalqqlk eqerevmvla
      121 yikgisreet aqllqvspeq ikellfsgfq llrkelgngd yyqgcneyqk lyvdylerkl
      181 erprkidfem hiyhchncqd dlaslqeail nfseiietfs vpagfmenvk krisqrenfl
      241 kqkkkkwkri glisasvfal fictgfftgi fskiyytlte enqelrvflq edlgerlgle
      301 aeddgikiki ksviadeiqt lifyeiedtn ennqyminid dgifieeemk imvantypry
      361 fppdmesdln kkekniyhgk mslrplkene atiqlninkv mklkpnstds yvnmepeege
      421 wnfdipvtkn psieyaldee veiegaavli dklilaptgt ilqyglnneq pekridminf
      481 knleinnkva eadlygnsyv haqndlrwsk fqahfkplfe ketdevkvrf gsvylsivdn
      541 ktialnaske ypqtfeyags tisidqvemg ppatvvfsnh eiknrayesl hynivseegd
      601 dspmemdheg iivdkngkey dmkkvtpkiy eemeqprhff tvqstkihgk kvtpksldiy
      661 gysttkyldd eveleteliv kdeagt
//
LOCUS       WP_235192309             210 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4912 domain-containing protein [Cytobacillus firmus].
ACCESSION   WP_235192309
VERSION     WP_235192309.1
KEYWORDS    RefSeq.
SOURCE      Cytobacillus firmus
  ORGANISM  Cytobacillus firmus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Cytobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027583.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16258.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Cytobacillus firmus"
                     /db_xref="taxon:1399"
     Protein         1..210
                     /product="DUF4912 domain-containing protein"
                     /calculated_mol_wt=23798
     Region          85..170
                     /region_name="DUF4912"
                     /note="Domain of unknown function (DUF4912); cl46799"
                     /db_xref="CDD:481139"
ORIGIN      
        1 mideiiklrr rglsfrkias eldttvgkvq yqwtkliqnk gkrdsgeslg nliaeenpvq
       61 nqtkdhlilt rsaddkvkvs wrlpiqkekl lslylnepas slrkslriyn vtgvifdgan
      121 gvcdhevils dqsewtfkgl kpgkvycvel gikitdthff pllrsealht seelpchshg
      181 kyesevqpew tvnvstytyy esvsegegke
//
LOCUS       WP_235192327             315 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA/RNA non-specific endonuclease [Cytobacillus firmus].
ACCESSION   WP_235192327
VERSION     WP_235192327.1
KEYWORDS    RefSeq.
SOURCE      Cytobacillus firmus
  ORGANISM  Cytobacillus firmus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Cytobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13930.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Cytobacillus firmus"
                     /db_xref="taxon:1399"
     Protein         1..315
                     /product="DNA/RNA non-specific endonuclease"
                     /calculated_mol_wt=34629
     Region          <155..>223
                     /region_name="NUC"
                     /note="DNA/RNA non-specific endonuclease; prokaryotic and
                     eukaryotic double- and single-stranded DNA and RNA
                     endonucleases also present in phosphodiesterases. They
                     exists as monomers and homodimers; cl00089"
                     /db_xref="CDD:469610"
ORIGIN      
        1 mkkkmnyltl llaiifmvgc tntedvsvte ektdsqvttv ditensdqee tekeetttiv
       61 depvekeapa qqnndgfpgy klievdggdl sgyrqpnvvv digfgdrkyl aftnehgqlv
      121 rviadeiilq dnstepvlss gryysdeakv pgverddmde ghiiadsmgg vsnaynitpq
      181 estlnrhgdq aylensirka ggatdfeaii typntetqip shyqytytlr gnkivdsfdn
      241 vnpdkvnesl gltgskpsns tssnekgdis svdtngngqv tiqeakdagy smpimsdhwl
      301 ypymrdndnd gmvge
//
LOCUS       WP_235192338             236 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphatase PAP2 family protein [Mycobacterium asiaticum].
ACCESSION   WP_235192338
VERSION     WP_235192338.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium asiaticum
  ORGANISM  Mycobacterium asiaticum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 236)
  AUTHORS   Neuwald,A.F.
  TITLE     An unexpected structural relationship between integral membrane
            phosphatases and soluble haloperoxidases
  JOURNAL   Protein Sci 6 (8), 1764-1767 (1997)
   PUBMED   9260289
REFERENCE   2  (residues 1 to 236)
  AUTHORS   Stukey,J. and Carman,G.M.
  TITLE     Identification of a novel phosphatase sequence motif
  JOURNAL   Protein Sci 6 (2), 469-472 (1997)
   PUBMED   9041652
REFERENCE   3  (residues 1 to 236)
  AUTHORS   Messerschmidt,A. and Wever,R.
  TITLE     X-ray structure of a vanadium-containing enzyme: chloroperoxidase
            from the fungus Curvularia inaequalis
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 392-396 (1996)
   PUBMED   8552646
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013718.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01569.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Mycobacterium asiaticum"
                     /db_xref="taxon:1790"
     Protein         1..236
                     /product="phosphatase PAP2 family protein"
                     /calculated_mol_wt=25484
     Region          34..210
                     /region_name="PAP2_like"
                     /note="PAP2_like proteins, a super-family of histidine
                     phosphatases and vanadium haloperoxidases, includes type 2
                     phosphatidic acid phosphatase or lipid phosphate
                     phosphatase (LPP), Glucose-6-phosphatase,
                     Phosphatidylglycerophosphatase B and bacterial acid...;
                     cl00474"
                     /db_xref="CDD:469784"
     Site            order(113,120,135..137,180,186,190)
                     /site_type="active"
                     /db_xref="CDD:238813"
ORIGIN      
        1 magprftfrf staawlalga lalyivlwvg hrqqwgwlat fdwsllnpah digikhsgwv
       61 rfwvivsfvl gpvplrtlgf vlsvlllvrr rvrmallvlc cvtlngfvtl vgkllagrpr
      121 patalvfvge tsfpsghale aaaavpallt lalpllsrra lrviamvvgg lcvfivgvar
      181 valnvhhpsd viagwalgyv yfvlclwvfr papvdtegha gsrprdptgs qalldp
//
LOCUS       WP_235192364             387 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Mycobacterium
            asiaticum].
ACCESSION   WP_235192364
VERSION     WP_235192364.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium asiaticum
  ORGANISM  Mycobacterium asiaticum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Mycobacterium asiaticum"
                     /db_xref="taxon:1790"
     Protein         1..387
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=42639
     Region          <247..379
                     /region_name="GlxA"
                     /note="Transcriptional regulator GlxA, contains an amidase
                     domain and an AraC-type DNA-binding HTH domain
                     [Transcription]; COG4977"
                     /db_xref="CDD:444002"
ORIGIN      
        1 mnsfpsikst ailssvtllp evrlparvcg vchvhavrid ltcrylresc riawphrvga
       61 dpklalvisr sfthsscsht aaaapeniag avgfaphkri tsashavsaa iwrfhgdsvy
      121 elrgparesi dlvslalsgn hhhtyfangr kkwsrphppf hmnlvaageh prgifrserp
      181 fsylhvylph rlvervaaes gvlksagsva lidpmcsrdp fvesigrqiv remsypdays
      241 amtidllaqh lvvrlirehs slsgtiprsa rsvaryrdwr lkrlvdylea hlsddvvldd
      301 laelvglsaa rvatlfregm gepphrwlmn rrvakacell gnpslsigei aqqcgfaspq
      361 hlatvmrrll attpteyras klgaesv
//
LOCUS       WP_235192427             236 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease [Mycobacterium asiaticum].
ACCESSION   WP_235192427
VERSION     WP_235192427.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium asiaticum
  ORGANISM  Mycobacterium asiaticum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 236)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01061.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Mycobacterium asiaticum"
                     /db_xref="taxon:1790"
     Protein         1..236
                     /product="ABC transporter permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=24582
     Region          13..236
                     /region_name="ABC2_membrane"
                     /note="ABC-2 type transporter; cl21474"
                     /db_xref="CDD:473876"
ORIGIN      
        1 mllaqfslea klllrngeql lltmfipitl ligltllplg sfgphraavf vpaimalavi
       61 staftgqaia vafdrrygal krlgatplpv wgiitgkala viftvflqsv vlgaigfalg
      121 wrpafaalal gavvialgta gfaslglllg gtlraeivla lanllwfvfa glgaltlesg
      181 mvptavkwva rvtpsgalte alsqamslsv dwfglavlvv wgvlaalaar rwfrft
//
LOCUS       WP_235192158             258 aa            linear   BCT 02-MAR-2025
DEFINITION  CSS-motif domain-containing protein [Pectobacterium parmentieri].
ACCESSION   WP_235192158
VERSION     WP_235192158.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium parmentieri
  ORGANISM  Pectobacterium parmentieri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 258)
  AUTHORS   Herbst,S., Lorkowski,M., Sarenko,O., Nguyen,T.K.L., Jaenicke,T. and
            Hengge,R.
  TITLE     Transmembrane redox control and proteolysis of PdeC, a novel type
            of c-di-GMP phosphodiesterase
  JOURNAL   EMBO J 37 (8) (2018)
   PUBMED   29514851
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024202.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12792.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Pectobacterium parmentieri"
                     /db_xref="taxon:1905730"
     Protein         1..258
                     /product="CSS-motif domain-containing protein"
                     /calculated_mol_wt=29185
     Region          3..>258
                     /region_name="YjcC"
                     /note="Redox-sensing c-di-GMP phosphodiesterase, contains
                     CSS-motif and EAL domains [Signal transduction
                     mechanisms]; COG4943"
                     /db_xref="CDD:443970"
ORIGIN      
        1 mmifvsfsfl fllnellvsh qenklmlrse klrfqaemla kqalsalndi naidddmcsp
       61 nyieklrvir wrhpniedvt slkgndiycs sfwgeinppl pitvksetgn nkpeligvkn
      121 nnktlynnig lyqghaavfi aretyesils tvvdgyfvmt sadkshkyfe sdpkgyiasg
      181 nsflrkmfta naslcspqwq fcviaqnahs gllllttgll tfvmaaalml ggfltffffk
      241 ifdkrkslkf rlkksink
//
LOCUS       WP_235192440             331 aa            linear   BCT 02-MAR-2025
DEFINITION  FHA domain-containing protein [Mycobacterium asiaticum].
ACCESSION   WP_235192440
VERSION     WP_235192440.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium asiaticum
  ORGANISM  Mycobacterium asiaticum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 331)
  AUTHORS   Pallen,M., Chaudhuri,R. and Khan,A.
  TITLE     Bacterial FHA domains: neglected players in the phospho-threonine
            signalling game?
  JOURNAL   Trends Microbiol 10 (12), 556-563 (2002)
   PUBMED   12564991
REFERENCE   2  (residues 1 to 331)
  AUTHORS   Durocher,D., Henckel,J., Fersht,A.R. and Jackson,S.P.
  TITLE     The FHA domain is a modular phosphopeptide recognition motif
  JOURNAL   Mol Cell 4 (3), 387-394 (1999)
   PUBMED   10518219
REFERENCE   3  (residues 1 to 331)
  AUTHORS   Hofmann,K. and Bucher,P.
  TITLE     The FHA domain: a putative nuclear signalling domain found in
            protein kinases and transcription factors
  JOURNAL   Trends Biochem Sci 20 (9), 347-349 (1995)
   PUBMED   7482699
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012708.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00498.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Mycobacterium asiaticum"
                     /db_xref="taxon:1790"
     Protein         1..331
                     /product="FHA domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=34720
     Region          11..95
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cl00062"
                     /db_xref="CDD:469597"
     Site            order(32..33,47..48,50,68..69)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:438714"
     Region          143..194
                     /region_name="HTH_XRE"
                     /note="Helix-turn-helix XRE-family like proteins.
                     Prokaryotic DNA binding proteins belonging to the
                     xenobiotic response element family of transcriptional
                     regulators; cd00093"
                     /db_xref="CDD:238045"
     Site            order(147,151,176)
                     /site_type="other"
                     /note="non-specific DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238045"
     Site            order(150,175)
                     /site_type="active"
                     /note="salt bridge [active]"
                     /db_xref="CDD:238045"
     Site            order(157..158,169,172,176..177)
                     /site_type="other"
                     /note="sequence-specific DNA binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238045"
ORIGIN      
        1 mtpetpsvpa mavrlgdkvh tldphggvav igrdssaavr laderisrah vrlepghdaw
       61 qaidtstngm yldgvrrssv litgpttlhl gdpegievsl tpagtpavpr dtsgdvtsvi
      121 dlpesdedqw wdaeldpgva ragravanrr nelqitqrgl akdkiinagt liafekgrsw
      181 prratlakle ealqwppgti arirsgtpaa pgvaaapagd ettesltdtv raplmaeave
      241 lamhsisaam sllgepsdpn ftprvtsila dlrklenvaa saarnakgtp sivlalssvr
      301 raynevmara arsphghags aavrragiar s
//
LOCUS       WP_235192490             175 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5994 family protein [Mycobacterium asiaticum].
ACCESSION   WP_235192490
VERSION     WP_235192490.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium asiaticum
  ORGANISM  Mycobacterium asiaticum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 175)
  AUTHORS   Ogasawara,Y. and Liu,H.W.
  TITLE     Biosynthetic studies of aziridine formation in azicemicins
  JOURNAL   J Am Chem Soc 131 (50), 18066-18068 (2009)
   PUBMED   19928906
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039955.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19457.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Mycobacterium asiaticum"
                     /db_xref="taxon:1790"
     Protein         1..175
                     /product="DUF5994 family protein"
                     /calculated_mol_wt=18568
     Region          15..122
                     /region_name="DUF5994"
                     /note="Family of unknown function (DUF5994); pfam19457"
                     /db_xref="CDD:466094"
ORIGIN      
        1 mnravrtrrl aspvrlvlsr dlggplngaw wphtasiage lpeligaisp rlgeicaisi
       61 nwsslagspd ldalnhvtkm attrvvghqr lmtisgaras aallvvpcrt ssplavavmr
      121 qvaelpvlpa eadrrefrta deivcaarae calwfqqlgl ptqtpvgdth psviv
//
LOCUS       WP_235192655             134 aa            linear   BCT 02-MAR-2025
DEFINITION  inner membrane protein YbjM [Pantoea sp. IMH].
ACCESSION   WP_235192655
VERSION     WP_235192655.1
KEYWORDS    RefSeq.
SOURCE      Pantoea sp. IMH
  ORGANISM  Pantoea sp. IMH
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11045.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Pantoea sp. IMH"
                     /db_xref="taxon:1267600"
     gene            1..134
                     /gene="ybjM"
     Protein         1..134
                     /product="inner membrane protein YbjM"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=14910
     Region          20..130
                     /region_name="YbjM"
                     /note="Putative inner membrane protein of
                     Enterobacteriaceae; pfam11045"
                     /db_xref="CDD:431625"
ORIGIN      
        1 mslrhklaee rfivfkeisw tgvvtcfsly civflavrye memegashtq srlgllmfil
       61 pgaiaalnvr rtplivailg allatpacmv llhlhffrai almqemafmt saifwcgsga
      121 lgvmlwrmll tgre
//
LOCUS       WP_235192694              38 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF305 domain-containing protein [Erwinia mallotivora].
ACCESSION   WP_235192694
VERSION     WP_235192694.1
KEYWORDS    RefSeq.
SOURCE      Erwinia mallotivora
  ORGANISM  Erwinia mallotivora
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Erwinia.
REFERENCE   1  (residues 1 to 38)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015658.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03713.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..38
                     /organism="Erwinia mallotivora"
                     /db_xref="taxon:69222"
     Protein         1..38
                     /product="DUF305 domain-containing protein"
                     /calculated_mol_wt=4044
     Region          <3..>36
                     /region_name="COG3544"
                     /note="Uncharacterized conserved protein, DUF305 family
                     [Function unknown]"
                     /db_xref="CDD:442765"
ORIGIN      
        1 mpfargmiad hrraiemakt glkqgkdpem calaqtsi
//
LOCUS       WP_235192721             147 aa            linear   BCT 02-MAR-2025
DEFINITION  Imm26 family immunity protein [Erwinia mallotivora].
ACCESSION   WP_235192721
VERSION     WP_235192721.1
KEYWORDS    RefSeq.
SOURCE      Erwinia mallotivora
  ORGANISM  Erwinia mallotivora
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Erwinia.
REFERENCE   1  (residues 1 to 147)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026766.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15428.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Erwinia mallotivora"
                     /db_xref="taxon:69222"
     Protein         1..147
                     /product="Imm26 family immunity protein"
                     /calculated_mol_wt=17215
     Region          21..>63
                     /region_name="Imm26"
                     /note="Immunity protein 26; pfam15428"
                     /db_xref="CDD:434709"
ORIGIN      
        1 mknfklwawd kkprtmlrfi kpgdifcfql ddkkygfgri iskvsighsa eifdhfsssp
       61 gidesalnln nslfllildt yslfdkkfrv sgelldmgif lklikihils marlgrerkl
      121 mywgmcliyq mrnqknihht cqkmift
//
LOCUS       WP_235192822             111 aa            linear   BCT 02-MAR-2025
DEFINITION  STAS domain-containing protein [Streptomyces viridochromogenes].
ACCESSION   WP_235192822
VERSION     WP_235192822.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces viridochromogenes
  ORGANISM  Streptomyces viridochromogenes
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 111)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The STAS domain - a link between anion transporters and
            antisigma-factor antagonists
  JOURNAL   Curr Biol 10 (2), R53-R55 (2000)
   PUBMED   10662676
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024857.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13466.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Streptomyces viridochromogenes"
                     /db_xref="taxon:1938"
     Protein         1..111
                     /product="STAS domain-containing protein"
                     /calculated_mol_wt=12151
     Region          25..>76
                     /region_name="SpoIIAA"
                     /note="Anti-anti-sigma regulatory factor (antagonist of
                     anti-sigma factor) [Signal transduction mechanisms];
                     COG1366"
                     /db_xref="CDD:440977"
ORIGIN      
        1 mhgsrgvdap avlrvtpltd rtgwraagei tlptrqvweg vlerladrde dvcylelsev
       61 tfvdvagasa laatvqrlpr rrrvvldtpp atlqrmlclf wpdlsaievv a
//
LOCUS       WP_235192838             162 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6230 family protein [Streptomyces viridochromogenes].
ACCESSION   WP_235192838
VERSION     WP_235192838.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces viridochromogenes
  ORGANISM  Streptomyces viridochromogenes
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 162)
  AUTHORS   Feng,Z., Ogasawara,Y., Nomura,S. and Dairi,T.
  TITLE     Biosynthetic Gene Cluster of a d-Tryptophan-Containing Lasso
            Peptide, MS-271
  JOURNAL   Chembiochem 19 (19), 2045-2048 (2018)
   PUBMED   29974638
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039694.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19741.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Streptomyces viridochromogenes"
                     /db_xref="taxon:1938"
     Protein         1..162
                     /product="DUF6230 family protein"
                     /calculated_mol_wt=16876
     Region          9..162
                     /region_name="DUF6230"
                     /note="Family of unknown function (DUF6230); pfam19741"
                     /db_xref="CDD:466168"
ORIGIN      
        1 mpvsfavagn pftvtaqrlt adgatqfaaf rqdatghdha vavvgirear isglcqsava
       61 htplgaatlv vrsdadrpvr ahdmvidlse vtgdmtfesv emgrdaatln rsgvagptgt
      121 yaqqartlti tdmrleawsl tagmfslsda slsvergeqp cp
//
LOCUS       WP_235192704             327 aa            linear   BCT 02-MAR-2025
DEFINITION  conjugal transfer nickase/helicase domain-containing protein
            [Erwinia mallotivora].
ACCESSION   WP_235192704
VERSION     WP_235192704.1
KEYWORDS    RefSeq.
SOURCE      Erwinia mallotivora
  ORGANISM  Erwinia mallotivora
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Erwinia.
REFERENCE   1  (residues 1 to 327)
  AUTHORS   Larbig,K.D., Christmann,A., Johann,A., Klockgether,J., Hartsch,T.,
            Merkl,R., Wiehlmann,L., Fritz,H.J. and Tummler,B.
  TITLE     Gene islands integrated into tRNA(Gly) genes confer genome
            diversity on a Pseudomonas aeruginosa clone
  JOURNAL   J Bacteriol 184 (23), 6665-6680 (2002)
   PUBMED   12426355
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019154.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07515.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Erwinia mallotivora"
                     /db_xref="taxon:69222"
     Protein         1..327
                     /product="conjugal transfer nickase/helicase
                     domain-containing protein"
                     /calculated_mol_wt=36445
     Region          207..325
                     /region_name="TraI_2_C"
                     /note="Putative conjugal transfer nickase/helicase TraI
                     C-term; pfam07515"
                     /db_xref="CDD:429507"
ORIGIN      
        1 mesfavlsag rlltsqavew lsdtplalhn vaysirnhhp emqllqklln eaaaiaespl
       61 qhdiettrst esgsqaellt ssfdhlknke tvtnesltav dftlatsleg vpaeladnps
      121 nkpcdinlse kdddnntetn sllslfdevn ntedatnpvt nethhclvdf teavtdepvi
      181 lkdmdhgcsr dalsdsevkn ssppdipdgq efmnwlskgi nsgelsfneq pdkihtisgy
      241 vflpvpgiff eflksrgena nsreslqlsf ermnihkrhd kkrfyyvlih decdkkgklr
      301 rekgyllkgk svfhqkvpad slyisap
//
LOCUS       WP_235192859             200 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-dependent oxidoreductase [Streptomyces viridochromogenes].
ACCESSION   WP_235192859
VERSION     WP_235192859.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces viridochromogenes
  ORGANISM  Streptomyces viridochromogenes
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 200)
  AUTHORS   Dengler,U., Niefind,K., Kiess,M. and Schomburg,D.
  TITLE     Crystal structure of a ternary complex of D-2-hydroxyisocaproate
            dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate
            at 1.9 A resolution
  JOURNAL   J Mol Biol 267 (3), 640-660 (1997)
   PUBMED   9126843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02826.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Streptomyces viridochromogenes"
                     /db_xref="taxon:1938"
     Protein         1..200
                     /product="NAD(P)-dependent oxidoreductase"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
                     /calculated_mol_wt=22104
     Region          <37..135
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mtmqprwtep eteafiiglp gsgygriara larraagfgl rleqhhprrr egdeldrwvs
       61 fdellrtsdv vsvhtpltae tkgmigaael almkptatlv ntgrggvade galltaprrg
      121 ylhsagldvl tdeprtdrat pcstnrtwwh shtrarqprr ptlpwwnspp atsrqclpat
      181 phppcspapr avseqltrrr
//
LOCUS       WP_235192866             270 aa            linear   BCT 02-MAR-2025
DEFINITION  TetR family transcriptional regulator [Streptomyces
            viridochromogenes].
ACCESSION   WP_235192866
VERSION     WP_235192866.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces viridochromogenes
  ORGANISM  Streptomyces viridochromogenes
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012655.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00440.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Streptomyces viridochromogenes"
                     /db_xref="taxon:1938"
     Protein         1..270
                     /product="TetR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=29400
     Region          23..>138
                     /region_name="mycofact_TetR"
                     /note="mycofactocin system transcriptional regulator;
                     TIGR03968"
                     /db_xref="CDD:188483"
ORIGIN      
        1 msqpakssrt patpdapesa agsraaaqrl kmrrelaaaa melfatkgye attvdeiaaa
       61 agvarrtffr hfrskeeaif pdhddtlira eavlnaapah ehpldtvcrg ikevmrmyaa
      121 rpeisvaryk ltrevptlre aeiasvarye rlftryllgh fdehahddda nddpllaeva
      181 asavvtahnh vlrrwlragg qgdveaqldh afaivrrtfg tgigagrdta prtapasvat
      241 qgevlvtvar tdapldevmr tieqalkers
//
LOCUS       WP_235192957             968 aa            linear   BCT 02-MAR-2025
DEFINITION  RNaseH domain-containing protein [Streptomyces viridochromogenes].
ACCESSION   WP_235192957
VERSION     WP_235192957.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces viridochromogenes
  ORGANISM  Streptomyces viridochromogenes
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 968)
  AUTHORS   Burroughs,A.M., Iyer,L.M. and Aravind,L.
  TITLE     Two novel PIWI families: roles in inter-genomic conflicts in
            bacteria and Mediator-dependent modulation of transcription in
            eukaryotes
  JOURNAL   Biol Direct 8, 13 (2013)
   PUBMED   23758928
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13032.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..968
                     /organism="Streptomyces viridochromogenes"
                     /db_xref="taxon:1938"
     Protein         1..968
                     /product="RNaseH domain-containing protein"
                     /calculated_mol_wt=108338
     Region          16..389
                     /region_name="pPIWI_RE_X"
                     /note="pPIWI_RE module N-terminal domain; pfam13111"
                     /db_xref="CDD:432979"
     Region          649..945
                     /region_name="RNaseH_pPIWI_RE"
                     /note="RNaseH domain of pPIWI_RE; pfam13032"
                     /db_xref="CDD:432943"
ORIGIN      
        1 mtalvwdfgd yhspirtawr elgstatqng kwikgvqdsd pflvpysiav tvlqqitdgy
       61 vyldkylafm vtlnpvepdi lrtvftyleg ivrrvpldei pfmdppalar lvadvaperr
      121 slaknilqeg dgkpaspdsw ayeavkwhia krlaakpfld revepvreah eaadgqvkhr
      181 tvgwepsdnv aavqyrpisn gdliaweqpi gpvfatlahp vdlaeaakar penptrsqvq
      241 yalsrlsvkm atytaepnpv lnldahirri nntvihastv lvdqgtdrpi msvsldgrgl
      301 rqtnrhalei lakmdadrss lnaieervad ersrlnarde ngkridiltp ppgvirptmp
      361 ktdsfavgtg agiyhlsllr ehiqrafgda vslldlkskg nvfgkrshep ataaqekekk
      421 qkkqdgeyvd ligkpspegi rrsieaagyk klrilclwyr datltrmihg lahpygldpe
      481 gidpdpggke cfpladgiea vfcnaealld hgpgtqratd aqritstfte pgvllaawce
      541 teipvrgeeh egmkpaevkt alaendakhq vvrelakaav psqflvgrey dpftktfnii
      601 kkpakafedh rvymglldly rscgvvddrf eralypeddp yalprmafcg ihirkqatdr
      661 kykgqpkrii tasaiipspe pggpwrmigw snihpqwehy alaqsnfhaa nyplhtengd
      721 gemqrwaqag edvrtalqdl hdeldglpya lmidghasrr vwpglhnnkq glgkdpddpr
      781 lwlpasglpp swnpvsiirm ncaqaemprl vavtekqkng ktvtvktssd lyypearpeg
      841 hpwflftepr nygkkrhgqw ktrwradpgk asknaderke nelnspwysm ttreitpmht
      901 rddydretla vaaarlshqa lswsdrtryp aplhaalqmd lghpqyrrsa pkdpesieil
      961 keasgtdv
//
LOCUS       WP_235192967             169 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5994 family protein [Streptomyces viridochromogenes].
ACCESSION   WP_235192967
VERSION     WP_235192967.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces viridochromogenes
  ORGANISM  Streptomyces viridochromogenes
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 169)
  AUTHORS   Ogasawara,Y. and Liu,H.W.
  TITLE     Biosynthetic studies of aziridine formation in azicemicins
  JOURNAL   J Am Chem Soc 131 (50), 18066-18068 (2009)
   PUBMED   19928906
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039955.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19457.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Streptomyces viridochromogenes"
                     /db_xref="taxon:1938"
     Protein         1..169
                     /product="DUF5994 family protein"
                     /calculated_mol_wt=17451
     Region          34..144
                     /region_name="DUF5994"
                     /note="Family of unknown function (DUF5994); pfam19457"
                     /db_xref="CDD:466094"
ORIGIN      
        1 msrsgrdrmm dvtgtsdgsg spegahtyrm plarlalapg agrgpldgaw wprcdllele
       61 lpalvgsldp grgtvarviv davawpdapr tvlapsrvid vtlsavdaea haivldcgav
      121 grwellvipp gesvaaaawl lntaadprna ltaahmlala eagfeddgr
//
LOCUS       WP_235192992             108 aa            linear   BCT 02-MAR-2025
DEFINITION  protein kinase domain-containing protein [Streptomyces
            viridochromogenes].
ACCESSION   WP_235192992
VERSION     WP_235192992.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces viridochromogenes
  ORGANISM  Streptomyces viridochromogenes
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 108)
  AUTHORS   Hunter,T. and Plowman,G.D.
  TITLE     The protein kinases of budding yeast: six score and more
  JOURNAL   Trends Biochem Sci 22 (1), 18-22 (1997)
   PUBMED   9020587
REFERENCE   2  (residues 1 to 108)
  AUTHORS   Hanks,S.K. and Hunter,T.
  TITLE     Protein kinases 6. The eukaryotic protein kinase superfamily:
            kinase (catalytic) domain structure and classification
  JOURNAL   FASEB J 9 (8), 576-596 (1995)
   PUBMED   7768349
REFERENCE   3  (residues 1 to 108)
  AUTHORS   Hanks,S.K. and Quinn,A.M.
  TITLE     Protein kinase catalytic domain sequence database: identification
            of conserved features of primary structure and classification of
            family members
  JOURNAL   Methods Enzymol 200, 38-62 (1991)
   PUBMED   1956325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00069.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Streptomyces viridochromogenes"
                     /db_xref="taxon:1938"
     Protein         1..108
                     /product="protein kinase domain-containing protein"
                     /GO_function="GO:0004672 - protein kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006468 - protein phosphorylation
                     [Evidence IEA]"
                     /calculated_mol_wt=11623
     Region          <3..>67
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 mthrdlkprh vilppqgqll idfgiargaa dtaltqtgla pgtpgytape vlisdqvgaa
       61 advfalgrrr rtprravrps gpgprtrcri gwctrtstst asirnwrr
//
LOCUS       WP_235193025             159 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Streptomyces viridochromogenes].
ACCESSION   WP_235193025
VERSION     WP_235193025.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces viridochromogenes
  ORGANISM  Streptomyces viridochromogenes
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 159)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 159)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Streptomyces viridochromogenes"
                     /db_xref="taxon:1938"
     Protein         1..159
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=17536
     Region          8..141
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
     Site            order(70..72,82..83)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
ORIGIN      
        1 mrgvteadlp ellrvdrevf pddpypyfvl rqhvdvhgdr ilvlddgecl hgyvlfvtts
       61 dgyvcwvlsl avspdqrgrg lgrrlmlevl rqlrrervhe vrltvepana aaimlyrslg
      121 fsaeggvrrd ylgpgedrli mtlgtgpgpa pgpsgllrg
//
LOCUS       WP_235193040             128 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerate kinase [Streptomyces viridochromogenes].
ACCESSION   WP_235193040
VERSION     WP_235193040.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces viridochromogenes
  ORGANISM  Streptomyces viridochromogenes
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 128)
  AUTHORS   Cusa,E., Obradors,N., Baldoma,L., Badia,J. and Aguilar,J.
  TITLE     Genetic analysis of a chromosomal region containing genes required
            for assimilation of allantoin nitrogen and linked glyoxylate
            metabolism in Escherichia coli
  JOURNAL   J Bacteriol 181 (24), 7479-7484 (1999)
   PUBMED   10601204
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014634.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02595.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Streptomyces viridochromogenes"
                     /db_xref="taxon:1938"
     Protein         1..128
                     /product="glycerate kinase"
                     /GO_function="GO:0008887 - glycerate kinase activity
                     [Evidence IEA]"
                     /GO_process="GO:0031388 - organic acid phosphorylation
                     [Evidence IEA]"
                     /calculated_mol_wt=13266
     Region          <2..87
                     /region_name="PRK10342"
                     /note="glycerate kinase I; Provisional; cl00841"
                     /db_xref="CDD:469950"
ORIGIN      
        1 mitaegaldh qtprgkvpae varraklhgr pvlalagtlg egaqevpgvd achgilpapm
       61 alaealvras elltdatera lrmivlgtrl pvvmadevpe aaprtdvagr rrlsqadvag
      121 tqrpssvr
//
LOCUS       WP_235193135             320 aa            linear   BCT 02-MAR-2025
DEFINITION  lactate/malate family dehydrogenase [Metamycoplasma hyosynoviae].
ACCESSION   WP_235193135
VERSION     WP_235193135.1
KEYWORDS    RefSeq.
SOURCE      Metamycoplasma hyosynoviae (Mycoplasma hyosynoviae)
  ORGANISM  Metamycoplasma hyosynoviae
            Bacteria; Bacillati; Mycoplasmatota; Mycoplasmoidales;
            Metamycoplasmataceae; Metamycoplasma.
REFERENCE   1  (residues 1 to 320)
  AUTHORS   Madern,D.
  TITLE     Molecular evolution within the L-malate and L-lactate dehydrogenase
            super-family
  JOURNAL   J Mol Evol 54 (6), 825-840 (2002)
   PUBMED   12029364
REFERENCE   2  (residues 1 to 320)
  AUTHORS   Chapman,A.D., Cortes,A., Dafforn,T.R., Clarke,A.R. and Brady,R.L.
  TITLE     Structural basis of substrate specificity in malate dehydrogenases:
            crystal structure of a ternary complex of porcine cytoplasmic
            malate dehydrogenase, alpha-ketomalonate and tetrahydoNAD
  JOURNAL   J Mol Biol 285 (2), 703-712 (1999)
   PUBMED   10075524
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012286.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00056.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Metamycoplasma hyosynoviae"
                     /db_xref="taxon:29559"
     Protein         1..320
                     /product="lactate/malate family dehydrogenase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=35063
     Region          2..307
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(9..11,32..33,76..77,99,119..121,144,148,176,233)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:133419"
     Site            order(13,17,37,41,43..44,46..48,151..152,154..155,161,235,
                     239)
                     /site_type="other"
                     /note="LDH/MDH dimer interface [polypeptide binding]"
                     /db_xref="CDD:133419"
     Site            order(121,152,176)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:133419"
ORIGIN      
        1 mkigivgvga vgssylyaal nkgveanyil idafekfaea qakdlndaac smancgstfe
       61 agkyadlada qivvitasvk pkegklqdrl ellkdnalli keiaenikks gfkgitiias
      121 npvdimasvy qqvtkfepsk vissgtilet armkkflsqk lkvkassitg fvigehgarc
      181 iipflkmrig lgslkdwlan gtvtkewldd lgkkvkdeaf eiisgkgitn fgigenlaei
      241 tlaiendrqs vyslgvqlsk eyknhgiyfg lpvilgkdgy rhlpkirlee deqklfddys
      301 reiketviei lnnlkikhnl
//
LOCUS       WP_235192749              52 aa            linear   BCT 02-MAR-2025
DEFINITION  antiterminator Q family protein [Erwinia mallotivora].
ACCESSION   WP_235192749
VERSION     WP_235192749.1
KEYWORDS    RefSeq.
SOURCE      Erwinia mallotivora
  ORGANISM  Erwinia mallotivora
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Erwinia.
REFERENCE   1  (residues 1 to 52)
  AUTHORS   Neely,M.N. and Friedman,D.I.
  TITLE     Arrangement and functional identification of genes in the
            regulatory region of lambdoid phage H-19B, a carrier of a
            Shiga-like toxin
  JOURNAL   Gene 223 (1-2), 105-113 (1998)
   PUBMED   9858702
REFERENCE   2  (residues 1 to 52)
  AUTHORS   Greenblatt,J., Nodwell,J.R. and Mason,S.W.
  TITLE     Transcriptional antitermination
  JOURNAL   Nature 364 (6436), 401-406 (1993)
   PUBMED   8332211
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018262.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06530.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..52
                     /organism="Erwinia mallotivora"
                     /db_xref="taxon:69222"
     Protein         1..52
                     /product="antiterminator Q family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0060567 - negative regulation of
                     termination of DNA-templated transcription [Evidence IEA]"
                     /calculated_mol_wt=5939
     Region          <1..46
                     /region_name="Phage_antitermQ"
                     /note="Phage antitermination protein Q; cl29970"
                     /db_xref="CDD:453083"
ORIGIN      
        1 mdhyirdisk ralgrklkls qgiirikfqm aegfidgcls mlevelkmdh sf
//
LOCUS       WP_235193185             140 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: tripartite tricarboxylate transporter TctB family
            protein [Ralstonia].
ACCESSION   WP_235193185
VERSION     WP_235193185.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia
  ORGANISM  Ralstonia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018979.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07331.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Ralstonia"
                     /db_xref="taxon:48736"
     Protein         1..140
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /calculated_mol_wt=14836
ORIGIN      
        1 mfivagaafa ilarsyrmgt assmgpgyfp fwlgvvlvll gvvvvvqsls rkgvvdripr
       61 wdvktllwvl gsvvlfglll qplglvlsiv vlvlvssmas heftlkgaag taivmvvmsl
      121 aafvyglklq fpvwpafign
//
LOCUS       WP_235193342             224 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Pantoea ananatis].
ACCESSION   WP_235193342
VERSION     WP_235193342.1
KEYWORDS    RefSeq.
SOURCE      Pantoea ananatis
  ORGANISM  Pantoea ananatis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Pantoea ananatis"
                     /db_xref="taxon:553"
     Protein         1..224
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=26039
     Region          11..215
                     /region_name="EAL"
                     /note="EAL domain. This domain is found in diverse
                     bacterial signaling proteins. It is called EAL after its
                     conserved residues and is also known as domain of unknown
                     function 2 (DUF2). The EAL domain has been shown to
                     stimulate degradation of a second...; cl29561"
                     /db_xref="CDD:453023"
ORIGIN      
        1 meiqnldnnn rawrfiaepi vnlkseriav evltrfaapg tpflhiskmn keqkirllre
       61 qlylihqkrh ffeshqllcs vnvdvemafa lleerdiyel atahsflrie vsesfpslae
      121 glnnpllrkl ynnytlwldd fgsasshfpc lqkglyeavk idkhffwehh nsplwkttla
      181 qikdycqfii vegvekdtyf qfakphaaaf qgylfeavnf dalg
//
LOCUS       WP_235193081             138 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6207 family protein [Streptomyces viridochromogenes].
ACCESSION   WP_235193081
VERSION     WP_235193081.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces viridochromogenes
  ORGANISM  Streptomyces viridochromogenes
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 138)
  AUTHORS   Liu,B., Ge,B., Ma,J., Wei,Q., Khan,A.A., Shi,L. and Zhang,K.
  TITLE     Identification of wysPII as an Activator of Morphological
            Development in Streptomyces albulus CK-15
  JOURNAL   Front Microbiol 9, 2550 (2018)
   PUBMED   30405594
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039687.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19711.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Streptomyces viridochromogenes"
                     /db_xref="taxon:1938"
     Protein         1..138
                     /product="DUF6207 family protein"
                     /calculated_mol_wt=15063
     Region          <9..>46
                     /region_name="DUF6207"
                     /note="Family of unknown function (DUF6207); pfam19711"
                     /db_xref="CDD:437543"
ORIGIN      
        1 mlrsrvwlve iaacdeetaf avqqllaarc aiapadrttr epgepgcgca aswtcvrrpt
       61 srcrvpstps hkgsltgrdv pagctdqlll asrlrhdhar tpvpatlrda avagrcrkww
      121 wmmravailt gwrkqktg
//
LOCUS       WP_235193366             213 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: homing endonuclease associated repeat-containing
            protein [Exiguobacterium].
ACCESSION   WP_235193366
VERSION     WP_235193366.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium
  ORGANISM  Exiguobacterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis.
REFERENCE   1  (residues 1 to 213)
  AUTHORS   Edgell,D.R.
  TITLE     Selfish DNA: homing endonucleases find a home
  JOURNAL   Curr Biol 19 (3), R115-R117 (2009)
   PUBMED   19211047
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037417.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18780.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Exiguobacterium"
                     /db_xref="taxon:33986"
     Protein         1..213
                     /product="homing endonuclease associated repeat-containing
                     protein"
                     /calculated_mol_wt=24425
     Region          18..71
                     /region_name="HNH_repeat"
                     /note="Homing endonuclease associated repeat; pfam18780"
                     /db_xref="CDD:465866"
ORIGIN      
        1 msqslstksh hlsteqqrmi hcirllgdll kerprrsvyr rfameqnwps pesiirqfgs
       61 waealaiagy ewhgettvdl pdkmpkytrd diietlalys rdmgsiitlk kyqewrklhp
      121 kapshyhivk tfgswhdaca eagleasvty skselsgalr eaihemgfsl sfeayrewak
      181 rnnkpstkai lhrygswsaa ihaveseifs skl
//
LOCUS       WP_235193369             379 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease [Exiguobacterium sp. AB2].
ACCESSION   WP_235193369
VERSION     WP_235193369.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium sp. AB2
  ORGANISM  Exiguobacterium sp. AB2
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis; Exiguobacterium.
REFERENCE   1  (residues 1 to 379)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024110.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12698.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Exiguobacterium sp. AB2"
                     /db_xref="taxon:1484479"
     Protein         1..379
                     /product="ABC transporter permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=42685
     Region          7..309
                     /region_name="permease_SagG"
                     /note="SagG family ABC transporter permease subunit;
                     NF038293"
                     /db_xref="CDD:439593"
ORIGIN      
        1 mktwtfikyd ikqqlrdrst lfwmlifpiv lifglgtmls aifstefslp vtdvayvees
       61 tdayreplet fltsddmref ltltaydtvd raeaavndgd advilhlvgp dvtllyeept
      121 tvevdvleav ltqytdianq qillaeagaf apyepftftd sesvdlsgrt ptsleyftvt
      181 isimtalfga fyitsmlnde rpmrgsylri qaapvrlidy rlartvsryg liflqlvlvf
      241 wfshfvyrsf sldhvrlell ligwvalaty gtafgffiss lprlaystkd aivngfvaii
      301 milsggyvpg fdqvtlayap waryvfmpif mrdgllavll rggdtslfwq slgwltlhvl
      361 vfaalsllfw kgvkrhgav
//
LOCUS       WP_235193404             457 aa            linear   BCT 02-MAR-2025
DEFINITION  barstar family protein [Exiguobacterium sp. AB2].
ACCESSION   WP_235193404
VERSION     WP_235193404.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium sp. AB2
  ORGANISM  Exiguobacterium sp. AB2
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis; Exiguobacterium.
REFERENCE   1  (residues 1 to 457)
  AUTHORS   Buckle,A.M., Schreiber,G. and Fersht,A.R.
  TITLE     Protein-protein recognition: crystal structural analysis of a
            barnase-barstar complex at 2.0-A resolution
  JOURNAL   Biochemistry 33 (30), 8878-8889 (1994)
   PUBMED   8043575
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013500.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01337.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Exiguobacterium sp. AB2"
                     /db_xref="taxon:1484479"
     Protein         1..457
                     /product="barstar family protein"
                     /calculated_mol_wt=53400
     Region          138..220
                     /region_name="Barstar_like"
                     /note="Barstar is an intracellular inhibitor of barnase,
                     an extracellular ribonuclease of Bacillus
                     amyloliquefaciens. Barstar binds tightly to the barnase
                     active site and sterically blocks it, thus inhibiting its
                     potentially lethal RNase activity inside the...; cl01048"
                     /db_xref="CDD:470045"
     Site            order(164,166,168..170,174,211)
                     /site_type="other"
                     /note="RNAase interaction site [polypeptide binding]"
                     /db_xref="CDD:238273"
ORIGIN      
        1 mtlkrpwlhe vdaataffvr rhamhsdafe qktirlsssn dgtlwkvdrn efdrvynqel
       61 ddkyrtvrrq aadifsfhpg diqivegftd atplrylvlh pftrevyvdv apsgvvetvy
      121 vwmhpievck qndrvtrvtl dvsniatgte lhellneqlq fpwhygmnwd afwdvitden
      181 glpdivelhg wtefeqrlpe aadalakcft dyenepdlkp criiyqknem lilprhafkk
      241 geanrliyrh ltgeafplrv erktsvrlpk rhrfsferle eesvtsgivh nhesiapwlt
      301 lsrddqrqdv vtfsnktdwl vsyyregltl hgtniesves idtadyetff rhvtrgaypi
      361 eltfclggtf gpreklyrlm lhdaawekli edrlltqlei pkakkfwqsf fsttpvqtve
      421 tfigefhpnl fgnfvlahda ddvyhfldhv ngsikrf
//
LOCUS       WP_235193397             341 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease [Exiguobacterium sp. AB2].
ACCESSION   WP_235193397
VERSION     WP_235193397.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium sp. AB2
  ORGANISM  Exiguobacterium sp. AB2
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis; Exiguobacterium.
REFERENCE   1  (residues 1 to 341)
  AUTHORS   Bujnicki,J.M. and Rychlewski,L.
  TITLE     Identification of a PD-(D/E)XK-like domain with a novel
            configuration of the endonuclease active site in the
            methyl-directed restriction enzyme Mrr and its homologs
  JOURNAL   Gene 267 (2), 183-191 (2001)
   PUBMED   11313145
REFERENCE   2  (residues 1 to 341)
  AUTHORS   Waite-Rees,P.A., Keating,C.J., Moran,L.S., Slatko,B.E.,
            Hornstra,L.J. and Benner,J.S.
  TITLE     Characterization and expression of the Escherichia coli Mrr
            restriction system
  JOURNAL   J Bacteriol 173 (16), 5207-5219 (1991)
   PUBMED   1650347
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016362.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04471.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Exiguobacterium sp. AB2"
                     /db_xref="taxon:1484479"
     Protein         1..341
                     /product="restriction endonuclease"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_process="GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /calculated_mol_wt=38063
     Region          3..193
                     /region_name="COG4127"
                     /note="Predicted restriction endonuclease, Mrr-cat
                     superfamily [General function prediction only]"
                     /db_xref="CDD:443303"
     Region          199..314
                     /region_name="Mrr_cat"
                     /note="Restriction endonuclease; pfam04471"
                     /db_xref="CDD:461322"
ORIGIN      
        1 mmnkpiwlvr agrtghqena alehnvvaig weelgdlski kdkdelikly esnyselkar
       61 aishkanqiw rfatemeigd yvvlplktep viaigqvtge yefnttiaee vrhirrvkwl
      121 ttdmprtrld qdllyslgaf mtvcriqrnd aetripqalq ryingvdlls tpqnidvdee
      181 eivdleaigr dqiriliere faghrlqdlv aailkvegfq pvvsppgkdg gvdilagkgv
      241 lgleepricv qvkataspag idvinsllgv vssygatygl vvslggftkd arnkakeqff
      301 kvrlwdsddl ieallrvydd ldedmqaslp lkrawvtvpa e
//
LOCUS       WP_235193459             309 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Exiguobacterium sp. AB2].
ACCESSION   WP_235193459
VERSION     WP_235193459.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium sp. AB2
  ORGANISM  Exiguobacterium sp. AB2
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis; Exiguobacterium.
REFERENCE   1  (residues 1 to 309)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Exiguobacterium sp. AB2"
                     /db_xref="taxon:1484479"
     Protein         1..309
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=34196
     Region          28..284
                     /region_name="Hydrolase_4"
                     /note="Serine aminopeptidase, S33; pfam12146"
                     /db_xref="CDD:463473"
ORIGIN      
        1 mnvtahtyad gyrtniftvr atnavadcfl fhgmlehher yhefashlae ngfnvyvcdl
       61 rgagalakeq esyahllpne gfqqmvtdam hvieqygngl ptfvlghsfg sllsrrlgqv
      121 mghrltgvva ispppgsgvi grigrfaida airrkgsdyp srlferllfg rynlkflpak
      181 tesdwissdp eevtsyrndp hcgglptlgy lyevasasld vtslpriheh pktlpllfvv
      241 gaddpvvhdg eglkgmvrny qaadievtvl sydgarhevl retnrtevwn ditawllqtt
      301 siplektsi
//
LOCUS       WP_235193465             489 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA translocase FtsK, partial [Exiguobacterium sp. AB2].
ACCESSION   WP_235193465
VERSION     WP_235193465.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium sp. AB2
  ORGANISM  Exiguobacterium sp. AB2
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis; Exiguobacterium.
REFERENCE   1  (residues 1 to 489)
  AUTHORS   Massey,T.H., Mercogliano,C.P., Yates,J., Sherratt,D.J. and Lowe,J.
  TITLE     Double-stranded DNA translocation: structure and mechanism of
            hexameric FtsK
  JOURNAL   Mol Cell 23 (4), 457-469 (2006)
   PUBMED   16916635
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036827.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17854.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Exiguobacterium sp. AB2"
                     /db_xref="taxon:1484479"
     Protein         1..>489
                     /product="DNA translocase FtsK"
     Region          <273..>487
                     /region_name="FtsK"
                     /note="DNA segregation ATPase FtsK/SpoIIIE or related
                     protein [Cell cycle control, cell division, chromosome
                     partitioning]; COG1674"
                     /db_xref="CDD:441280"
ORIGIN      
        1 mtqkkvapks rktppkrkrp apkarkkqpi pwrtygwsaf vlavtafifs lfefgwvgtr
       61 tsmlavtlfg gwgaltylai gftlliflsd wrpsqrtgif llflafllfg dlvwgaerga
      121 ingalydmnh yllsdfgiif lgiiclvvgi sllsptiwrs agqrllesgr aikqewqere
      181 rperktapvr kkatasvqre skpltepsep epetdavtih dipivgfseq vvaekqeqnq
      241 gtkaaestdq vadmatedmm mtaaqdvsdt yelptftils epvvtdlsge ntrlkanatk
      301 lvqtlksfgv gvkvlkihlg ptvtkyelqp digvkvsrit slsddlalal aakdirieap
      361 ipgkaaigie vpnqevapvc lrevleadtv kreaspllva lgrsisgetv tvalnkmphl
      421 lvagstgsgk svcingmivs ilmrtrpdev rlmmidpkmv elnvyngvph lltpvvtdpk
      481 kaaqalkqv
//
LOCUS       WP_235193496             454 aa            linear   BCT 02-MAR-2025
DEFINITION  S41 family peptidase [Staphylococcus chromogenes].
ACCESSION   WP_235193496
VERSION     WP_235193496.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus chromogenes
  ORGANISM  Staphylococcus chromogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015531.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03572.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Staphylococcus chromogenes"
                     /db_xref="taxon:46126"
     Protein         1..454
                     /product="S41 family peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=50282
     Region          57..384
                     /region_name="CtpA"
                     /note="C-terminal processing protease CtpA/Prc, contains a
                     PDZ domain [Posttranslational modification, protein
                     turnover, chaperones]; COG0793"
                     /db_xref="CDD:440556"
     Region          388..449
                     /region_name="PGRP"
                     /note="Peptidoglycan-binding (PGRP) domain of
                     peptidoglycan hydrolases [Cell wall/membrane/envelope
                     biogenesis]; COG3409"
                     /db_xref="CDD:442635"
ORIGIN      
        1 mlppkekths kekkyvslsh fimgivltfi ltallifggi ylwhqksqnq qvsansekls
       61 kvyetlandy yqtpnkdkll enaingmtkg lkdpyteyis kdkttafned vtgdfvgiga
      121 emqqkgnqim itspmkaspa ekaglkpkdi lkavngkpvk gktlneiipq irgkkgtkvt
      181 ltiqrgsesk dftverdtih vksvevekkd nvtvfkvnkf qegtsgelks aiqkaqqsga
      241 knilidlrnn pgglldeavk msniflkkde pvlylekgkq teavktsnkp lknvndlnis
      301 vlvnegsasa seiftgamkd hkiakiygtk tfgkgivqtt reledgsilk ftemkwltpn
      361 kqyihgkgiq pdvkvagadf enlnvipsdq tfklgdtnth vksikiglda lgyssgtqne
      421 qfdsrlqeti kkfqsthdln itgefdkqtn qkft
//
LOCUS       WP_235193533             255 aa            linear   BCT 02-MAR-2025
DEFINITION  Mu transposase domain-containing protein [Staphylococcus aureus].
ACCESSION   WP_235193533
VERSION     WP_235193533.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 255)
  AUTHORS   Rice,P. and Mizuuchi,K.
  TITLE     Structure of the bacteriophage Mu transposase core: a common
            structural motif for DNA transposition and retroviral integration
  JOURNAL   Cell 82 (2), 209-220 (1995)
   PUBMED   7628012
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046294.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22483.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..255
                     /product="Mu transposase domain-containing protein"
                     /calculated_mol_wt=30453
     Region          <1..>210
                     /region_name="COG4584"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:443641"
ORIGIN      
        1 mkyitltwdr kqdtlfeclk dafeytegvp keiwfdnmrt vvdrprtqyk kvvfnnlfyq
       61 fskdanfepi acrpyrpqtk gsveslakfv eqrlrpydye fydaveligl vndlchelnh
      121 leisqateqr pidvfnyeek ehlnsfnakl ldtyieneci rivskesmin frkgkysvpt
      181 kyigeevqvi fnnstdelli yydgelirrh nlserkfnyi vedmseilks dvfkhkddke
      241 iltyiensll lydei
//
LOCUS       WP_235193557             815 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-ketoacyl synthase N-terminal-like domain-containing protein
            [Paenibacillus polymyxa].
ACCESSION   WP_235193557
VERSION     WP_235193557.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus polymyxa
  ORGANISM  Paenibacillus polymyxa
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 815)
  AUTHORS   Huang,W., Jia,J., Edwards,P., Dehesh,K., Schneider,G. and
            Lindqvist,Y.
  TITLE     Crystal structure of beta-ketoacyl-acyl carrier protein synthase II
            from E.coli reveals the molecular architecture of condensing
            enzymes
  JOURNAL   EMBO J 17 (5), 1183-1191 (1998)
   PUBMED   9482715
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012337.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00109.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Paenibacillus polymyxa"
                     /db_xref="taxon:1406"
     Protein         1..815
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /calculated_mol_wt=90406
     Region          <1..34
                     /region_name="PKS_PP"
                     /note="Phosphopantetheine attachment site; smart00823"
                     /db_xref="CDD:214834"
     Region          75..147
                     /region_name="AcpP"
                     /note="Acyl carrier protein [Lipid transport and
                     metabolism]; COG0236"
                     /db_xref="CDD:440006"
     Region          218..>753
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          <781..>815
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
ORIGIN      
        1 meitdqleet fgslsrtllf eypnirslte yfleshrdel stlfgldqva tvsaiadtas
       61 vanetkslag eerlrdqitg ylkgllssst glpeqrieed knlenygvds iksmeitdql
      121 eetfgslsrt llfeypniqs ltdyfleshr eelnalfgae qelvaaastk smrivehaka
      181 psplfrhspi ssvrvepkee aketktkiet ktetgamdia vigmsgkypg aeniqefwrn
      241 lqegkdcite vpkdrwdhdl yfdkernkpg ktyckwggfl nrinpldssf fhltpyevsl
      301 mdpmeqlfle miwsllesag ytremlqkkh qskvgvyvga tyhkyctcdt ntdapritsf
      361 gsvavanpms hyfnfqgpsi sidtmssssa vavhmacesl irgecqiava gggnlltspk
      421 kyiessqnql igsheesrsf adgdgylpae gvgavllkpl hkaeedgdci lavikstatn
      481 hgghsngytv pnpnaqaqlv eenflkagih prtvsyveaa angstlgdpi elvalkksfq
      541 kftdeqhfca mgsvksnigh aeaasgisql tkailqlwhr klvptikaek lnpnltfsnt
      601 pfylqrelqe wkrpvieleg eerefplrat vssfgaggsn vhfileeymp spkeavqlqg
      661 adqtevvils dinwerlnal asqlleyveq qhelslhdia ftlqtgream kcraaivass
      721 reelrtglre liesvgqgne perasipvfi geggedsnks allsgkvgek vsqilleern
      781 leniamywtq ggritwealh eghtvrripl ptspf
//
LOCUS       WP_235193572              60 aa            linear   BCT 02-MAR-2025
DEFINITION  antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein
            [Paenibacillus polymyxa].
ACCESSION   WP_235193572
VERSION     WP_235193572.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus polymyxa
  ORGANISM  Paenibacillus polymyxa
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 60)
  AUTHORS   Zhang,S.P., Feng,H.Z., Wang,Q., Kempher,M.L., Quan,S.W., Tao,X.,
            Niu,S., Wang,Y., Feng,H.Y. and He,Y.X.
  TITLE     Bacterial type II toxin-antitoxin systems acting through
            post-translational modifications
  JOURNAL   Comput Struct Biotechnol J 19, 86-93 (2020)
   PUBMED   33384857
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 60)
  AUTHORS   Freire,D.M., Gutierrez,C., Garza-Garcia,A., Grabowska,A.D.,
            Sala,A.J., Ariyachaokun,K., Panikova,T., Beckham,K.S.H., Colom,A.,
            Pogenberg,V., Cianci,M., Tuukkanen,A., Boudehen,Y.M., Peixoto,A.,
            Botella,L., Svergun,D.I., Schnappinger,D., Schneider,T.R.,
            Genevaux,P., de Carvalho,L.P.S., Wilmanns,M., Parret,A.H.A. and
            Neyrolles,O.
  TITLE     An NAD+ Phosphorylase Toxin Triggers Mycobacterium tuberculosis
            Cell Death
  JOURNAL   Mol Cell 73 (6), 1282-1291 (2019)
   PUBMED   30792174
REFERENCE   3  (residues 1 to 60)
  AUTHORS   Piscotta,F.J., Jeffrey,P.D. and Link,A.J.
  TITLE     ParST is a widespread toxin-antitoxin module that targets
            nucleotide metabolism
  JOURNAL   Proc Natl Acad Sci U S A 116 (3), 826-834 (2019)
   PUBMED   30598453
REFERENCE   4  (residues 1 to 60)
  AUTHORS   Skjerning,R.B., Senissar,M., Winther,K.S., Gerdes,K. and
            Brodersen,D.E.
  TITLE     The RES domain toxins of RES-Xre toxin-antitoxin modules induce
            cell stasis by degrading NAD+
  JOURNAL   Mol Microbiol 111 (1), 221-236 (2019)
   PUBMED   30315706
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021255.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09722.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..60
                     /organism="Paenibacillus polymyxa"
                     /db_xref="taxon:1406"
     Protein         1..60
                     /product="antitoxin Xre/MbcA/ParS toxin-binding
                     domain-containing protein"
                     /calculated_mol_wt=6671
     Region          <25..58
                     /region_name="COG5642"
                     /note="Uncharacterized conserved protein, DUF2384 family
                     [Function unknown]"
                     /db_xref="CDD:444366"
ORIGIN      
        1 maqshipkei qivllpdmge ylltwmdlkv palghetpsd ylkteegika lkaailrmpr
//
LOCUS       WP_235193649             163 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6386 family protein [Paenibacillus polymyxa].
ACCESSION   WP_235193649
VERSION     WP_235193649.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus polymyxa
  ORGANISM  Paenibacillus polymyxa
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 163)
  AUTHORS   Dejong,C.A., Chen,G.M., Li,H., Johnston,C.W., Edwards,M.R.,
            Rees,P.N., Skinnider,M.A., Webster,A.L. and Magarvey,N.A.
  TITLE     Polyketide and nonribosomal peptide retro-biosynthesis and global
            gene cluster matching
  JOURNAL   Nat Chem Biol 12 (12), 1007-1014 (2016)
   PUBMED   27694801
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039425.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19923.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Paenibacillus polymyxa"
                     /db_xref="taxon:1406"
     Protein         1..163
                     /product="DUF6386 family protein"
                     /calculated_mol_wt=17951
     Region          16..163
                     /region_name="DUF6386"
                     /note="Family of unknown function (DUF6386); pfam19923"
                     /db_xref="CDD:437755"
ORIGIN      
        1 mrkrkfadhd qedrmmnmag spfqfttdta tlclfdtqal khrlndapdw wsieedelge
       61 lnagnaafln lgadgtyevv iadhieqpmv rlflkvpsgn ifigageevt ggelepdcvw
      121 ggsflsvqpg lceclasren nriylsfkkg segsnsftsl irl
//
LOCUS       WP_235192724             331 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase domain-containing protein [Erwinia
            mallotivora].
ACCESSION   WP_235192724
VERSION     WP_235192724.1
KEYWORDS    RefSeq.
SOURCE      Erwinia mallotivora
  ORGANISM  Erwinia mallotivora
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Erwinia.
REFERENCE   1  (residues 1 to 331)
  AUTHORS   Ke,C.J., Lin,X.J., Zhang,B.Y. and Chen,L.Y.
  TITLE     Turgor regulation defect 1 proteins play a conserved role in pollen
            tube reproductive innovation of the angiosperms
  JOURNAL   Plant J 106 (5), 1356-1365 (2021)
   PUBMED   33735469
REFERENCE   2  (residues 1 to 331)
  AUTHORS   Fabrissin,I., Cueff,G., Berger,A., Granier,F., Salle,C.,
            Poulain,D., Ralet,M.C. and North,H.M.
  TITLE     Natural Variation Reveals a Key Role for Rhamnogalacturonan I in
            Seed Outer Mucilage and Underlying Genes
  JOURNAL   Plant Physiol 181 (4), 1498-1518 (2019)
   PUBMED   31591153
REFERENCE   3  (residues 1 to 331)
  AUTHORS   Voiniciuc,C., Engle,K.A., Gunl,M., Dieluweit,S., Schmidt,M.H.,
            Yang,J.Y., Moremen,K.W., Mohnen,D. and Usadel,B.
  TITLE     Identification of Key Enzymes for Pectin Synthesis in Seed Mucilage
  JOURNAL   Plant Physiol 178 (3), 1045-1064 (2018)
   PUBMED   30228108
  REMARK    Erratum:[Plant Physiol. 2021 Apr 2;185(3):1259-1264. doi:
            10.1093/plphys/kiaa037.. PMID: 33615384]
REFERENCE   4  (residues 1 to 331)
  AUTHORS   Chen,L.Y., Shi,D.Q., Zhang,W.J., Tang,Z.S., Liu,J. and Yang,W.C.
  TITLE     The Arabidopsis alkaline ceramidase TOD1 is a key turgor pressure
            regulator in plant cells
  JOURNAL   Nat Commun 6, 6030 (2015)
   PUBMED   25591940
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016640.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04765.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Erwinia mallotivora"
                     /db_xref="taxon:69222"
     Protein         1..331
                     /product="glycosyltransferase domain-containing protein"
                     /calculated_mol_wt=38828
     Region          <24..208
                     /region_name="DUF616"
                     /note="Protein of unknown function (DUF616); pfam04765"
                     /db_xref="CDD:428112"
ORIGIN      
        1 mhfclkeqrv vamqehkssm clytviiggy eelnelpsei aasslakicl tddptltskt
       61 weirvvkpaf pmdtvrsqri lkilphrflp eferslyidn tiylkrnpve iintfcensd
      121 isvplhsfre hvyeefleva rgglddsari feqmnhyqlt hsevlklkpy wsailvrnhm
      181 kkhvidlmes wyrqvlrysr rdqlslnyae aetgvninpi eidnfsstyh qwpiykkrdv
      241 skrlwspgls ggmtlfekme qaknlqlsld nkvrqlvddy aeikekylpk rapegftqer
      301 yyqlnpdvaa agvdavqhyl sfgwredrkw k
//
LOCUS       WP_235193707             243 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3105 domain-containing protein [Paenibacillus sp. FSL R5-192].
ACCESSION   WP_235193707
VERSION     WP_235193707.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL R5-192
  ORGANISM  Paenibacillus sp. FSL R5-192
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022747.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11303.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Paenibacillus sp. FSL R5-192"
                     /db_xref="taxon:1226754"
     Protein         1..243
                     /product="DUF3105 domain-containing protein"
                     /calculated_mol_wt=27284
     Region          114..230
                     /region_name="DUF3105"
                     /note="Protein of unknown function (DUF3105); pfam11303"
                     /db_xref="CDD:463256"
ORIGIN      
        1 mnhmqmehea dtsylwlivg vivllfsiaa yiwasrtqgk ilghmkkker adiqkksrsl
       61 rlaahvmmam siitfglffm qgagktynva dlksnatidv tddkyygadh tedpiqyemt
      121 iptsgphnph dikfgfytdf pgynylvhnl ehgdiiiyyr enasedlkeh lkylakfrea
      181 gagilavpnk dipegsevvv tawtktmkld qfddakvgtf inkyinqgpe kipasvrqgg
      241 gtm
//
LOCUS       WP_235193821             529 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Paenibacillus sp. FSL R5-192].
ACCESSION   WP_235193821
VERSION     WP_235193821.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL R5-192
  ORGANISM  Paenibacillus sp. FSL R5-192
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 529)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Paenibacillus sp. FSL R5-192"
                     /db_xref="taxon:1226754"
     Protein         1..529
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=61082
     Region          1..121
                     /region_name="REC_YesN-like"
                     /note="phosphoacceptor receiver (REC) domain of YesN and
                     related helix-turn-helix containing response regulators;
                     cd17536"
                     /db_xref="CDD:381091"
     Site            order(6..9,12..14,17,103..104)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381091"
     Region          148..272
                     /region_name="GGDEF_2"
                     /note="GGDEF-like domain; pfam17853"
                     /db_xref="CDD:465533"
     Region          425..508
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
ORIGIN      
        1 mmivddeigi renirscidw ekegfhycgd apdgelalpl ihewapdili tdikmpfmng
       61 leltsivrtq qpdikiiims ghdefsyaqe airlgvteyc lkpisaaeli qmlhkvskqm
      121 deehqrmtnr titkekllad lcggligtsd aiesakqlsl plsaryytiv iidvrltdds
      181 rdpeslmkkl lpileetrdp hvellpyirs rtelvlllky hsddsisvyl eqlrgrvrme
      241 lehtfkcnii lgigsqqerl qgihvsylea eedkyinrlt lqnraslhdi nldeqttlfl
      301 drnsfleflk igspnlrdhf vqefaaplqs fdwksssygf yllndltles frlanqlfrm
      361 sdhsdenits lqqtirkitc wedctqylcs llnllwqrra acsgkysdvi dqvkayvsre
      421 ynneqvslkm isahvrisps hlskifsqet gqtiteyltq irigkakell kttnnktfei
      481 aykvgyndsh yfsnifkktt gftpreyrtq gteesqarss dmrkesmye
//
LOCUS       WP_235193827              42 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6254 family protein [Paenibacillus].
ACCESSION   WP_235193827
VERSION     WP_235193827.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus
  ORGANISM  Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040037.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19767.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..42
                     /organism="Paenibacillus"
                     /db_xref="taxon:44249"
     Protein         1..42
                     /product="DUF6254 family protein"
                     /calculated_mol_wt=4850
     Region          1..36
                     /region_name="DUF6254"
                     /note="Family of unknown function (DUF6254); pfam19767"
                     /db_xref="CDD:437599"
ORIGIN      
        1 madqkkrkea awksrkqeqh phgkikslkk lsseyeekpt tn
//
LOCUS       WP_235193900             188 aa            linear   BCT 02-MAR-2025
DEFINITION  HAD hydrolase family protein [Paenibacillus sp. FSL R5-192].
ACCESSION   WP_235193900
VERSION     WP_235193900.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL R5-192
  ORGANISM  Paenibacillus sp. FSL R5-192
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019887.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08282.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Paenibacillus sp. FSL R5-192"
                     /db_xref="taxon:1226754"
     Protein         1..188
                     /product="HAD hydrolase family protein"
                     /calculated_mol_wt=20615
     Region          <14..188
                     /region_name="Cof-subfamily"
                     /note="Cof subfamily of IIB subfamily of haloacid
                     dehalogenase superfamily; TIGR00099"
                     /db_xref="CDD:272905"
ORIGIN      
        1 mrqngqksca qsrnkngidf ylesnsalya ssnlqphler riygdvendp varekkelks
       61 hpfiagltyg eadlykddvn kvcflessai pferikqefe gkfeviqctv pifgegsgel
      121 mipgihkaia iadllkhlgm sqedtcaigd gmndaemlef cniriamgna kpglkaiadv
      181 itgtveed
//
LOCUS       WP_235193912              29 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: putative holin-like toxin [unclassified
            Paenibacillus].
ACCESSION   WP_235193912
VERSION     WP_235193912.1
KEYWORDS    RefSeq.
SOURCE      unclassified Paenibacillus
  ORGANISM  unclassified Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 29)
  AUTHORS   Rajesh,T., Anthony,T., Saranya,S., Pushpam,P.L. and Gunasekaran,P.
  TITLE     Functional characterization of a new holin-like antibacterial
            protein coding gene tmp1 from goat skin surface metagenome
  JOURNAL   Appl Microbiol Biotechnol 89 (4), 1061-1073 (2011)
   PUBMED   20927512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16935.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..29
                     /organism="unclassified Paenibacillus"
                     /db_xref="taxon:185978"
     Protein         1..29
                     /product="putative holin-like toxin"
                     /calculated_mol_wt=3029
ORIGIN      
        1 misfagfivt liglivtivi alnnqnkkk
//
LOCUS       WP_235193978             967 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5704 domain-containing protein [Paenibacillus sp. FSL R5-192].
ACCESSION   WP_235193978
VERSION     WP_235193978.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL R5-192
  ORGANISM  Paenibacillus sp. FSL R5-192
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040151.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18964.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..967
                     /organism="Paenibacillus sp. FSL R5-192"
                     /db_xref="taxon:1226754"
     Protein         1..967
                     /product="DUF5704 domain-containing protein"
                     /calculated_mol_wt=106929
     Region          69..142
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); pfam02368"
                     /db_xref="CDD:396788"
     Region          202..387
                     /region_name="DUF5704"
                     /note="Family of unknown function (DUF5704); pfam18964"
                     /db_xref="CDD:436871"
ORIGIN      
        1 misvdefdgl stkfqmqvgg aiaptasrey nppkwsadyi frtdlywkal aeitkeinlt
       61 aggqlslnqs kqlnatvktk ngdgnfgaet nvnngsggtt twessnpvva tvsnsglvqp
      121 vsrgtttitv lwkkdefqlt tttnigveen pgtgegdgng gggggctpti gppsagtims
      181 mndldpnang viksdnrdne tfnvlkgipt seslytnafa dnylfkqawa kmsgkvtync
      241 nvtisydrew tvpgpeecdd dgctpgppvp andtvpkpyn fqitrdysyw kinnlevyki
      301 akatmnnyal pgetvtmnpt gytpptlesk ndeaveshvr pgqttsisyt ppkltggldq
      361 ppsvpddtsr lkgiaesntp qskvnndlvk fnnttimndv eatkdgpaps nipnpttigr
      421 dvlykpgnmi snsllnkant tssgeiyydl lpdnvnggsn kilpingint vtvhtpvvny
      481 awvsddqphn qktvpdptsa alilerpfiv riptsgqhle aasypgygnr dyakyfrikq
      541 vqfpfdvyna drsqfipamt wvdipvnqld ttfylpvwvn egkyhiafrn iaenapanft
      601 eqqdsntnla hhvaadtvpv dvigrlydfh vtdisdynwe svfrkrlgsp eptgysywtg
      661 insidgdprg nlapfvlpir pgshpvqgfa natvktgyhf kfdlktkgnm fgkqdgirit
      721 ptfafvskdg sshqevdlyy hrgqerliri gsvqdlekrf vvlnsrlrnv pgtelgdtar
      781 yqytyeltae ersqrtlaeh mvrlvdqtsh qktwvgrydw milsapirtl igpktdipsg
      841 vnvdranasi qrwygeyslp advyavpkgt dleplaqqnq ldeksnvflk ngyivvnfnm
      901 eslrngntea phlqyihapl mnqwqmegfn ktptdsqgrn wplkdgdivf yhadqssrnd
      961 fqsqvph
//
LOCUS       WP_235193968              81 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Paenibacillus sp. FSL R5-192].
ACCESSION   WP_235193968
VERSION     WP_235193968.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL R5-192
  ORGANISM  Paenibacillus sp. FSL R5-192
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 81)
  AUTHORS   Gao,G., Nara,T., Nakajima-Shimada,J. and Aoki,T.
  TITLE     Novel organization and sequences of five genes encoding all six
            enzymes for de novo pyrimidine biosynthesis in Trypanosoma cruzi
  JOURNAL   J Mol Biol 285 (1), 149-161 (1999)
   PUBMED   9878395
REFERENCE   2  (residues 1 to 81)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
REFERENCE   3  (residues 1 to 81)
  AUTHORS   Nygaard,P., Duckert,P. and Saxild,H.H.
  TITLE     Role of adenine deaminase in purine salvage and nitrogen metabolism
            and characterization of the ade gene in Bacillus subtilis
  JOURNAL   J Bacteriol 178 (3), 846-853 (1996)
   PUBMED   8550522
REFERENCE   4  (residues 1 to 81)
  AUTHORS   Lollier,M., Jaquet,L., Nedeva,T., Lacroute,F., Potier,S. and
            Souciet,J.L.
  TITLE     As in Saccharomyces cerevisiae, aspartate transcarbamoylase is
            assembled on a multifunctional protein including a
            dihydroorotase-like cryptic domain in Schizosaccharomyces pombe
  JOURNAL   Curr Genet 28 (2), 138-149 (1995)
   PUBMED   8590465
REFERENCE   5  (residues 1 to 81)
  AUTHORS   Jabri,E., Carr,M.B., Hausinger,R.P. and Karplus,P.A.
  TITLE     The crystal structure of urease from Klebsiella aerogenes
  JOURNAL   Science 268 (5213), 998-1004 (1995)
   PUBMED   7754395
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01979.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Paenibacillus sp. FSL R5-192"
                     /db_xref="taxon:1226754"
     Protein         1..81
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=8874
     Region          <1..62
                     /region_name="HutI"
                     /note="Imidazolonepropionase or related amidohydrolase
                     [Secondary metabolites biosynthesis, transport and
                     catabolism]; COG1228"
                     /db_xref="CDD:440841"
ORIGIN      
        1 mtnkqvidmv trtnakilgi dhvtgtvdig knadliimeq nplehieals diamvmvkgn
       61 liqtpsvtri kevddvlysv w
//
LOCUS       WP_235193985             295 aa            linear   BCT 02-MAR-2025
DEFINITION  cell wall hydrolase [Paenibacillus sp. FSL R5-192].
ACCESSION   WP_235193985
VERSION     WP_235193985.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL R5-192
  ORGANISM  Paenibacillus sp. FSL R5-192
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 295)
  AUTHORS   Boland,F.M., Atrih,A., Chirakkal,H., Foster,S.J. and Moir,A.
  TITLE     Complete spore-cortex hydrolysis during germination of Bacillus
            subtilis 168 requires SleB and YpeB
  JOURNAL   Microbiology (Reading) 146 (Pt 1), 57-64 (2000)
   PUBMED   10658652
REFERENCE   2  (residues 1 to 295)
  AUTHORS   Ishikawa,S., Yamane,K. and Sekiguchi,J.
  TITLE     Regulation and characterization of a newly deduced cell wall
            hydrolase gene (cwlJ) which affects germination of Bacillus
            subtilis spores
  JOURNAL   J Bacteriol 180 (6), 1375-1380 (1998)
   PUBMED   9515903
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019128.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07486.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Paenibacillus sp. FSL R5-192"
                     /db_xref="taxon:1226754"
     Protein         1..295
                     /product="cell wall hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=31748
     Region          108..295
                     /region_name="spore_SleB"
                     /note="spore cortex-lytic enzyme; TIGR02869"
                     /db_xref="CDD:213747"
ORIGIN      
        1 mlknnigmdq pneineknmi seldsvsemk emkvvshmns nerttvdstn egldlltfad
       61 nmepitvsrk vthgkgnmag kragrvsmll gacaltlglt vaapsagaqk leqgvrsehv
      121 lqlqeqlsdl gyfdagltgy ygtitkgavr kfqqaqglsa dgvagpatln rlnkkakaeg
      181 etlrqlakli hgeargesfe gqvavgavvl nrvhssefps siskvifqkg qftaiddgqf
      241 ntkptqtsyr aarkalngad ptngalyyyn pkiatsvwsk srptlltigq hdftr
//
LOCUS       WP_235194028             137 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF732 domain-containing protein [Rhodococcus aetherivorans].
ACCESSION   WP_235194028
VERSION     WP_235194028.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus aetherivorans
  ORGANISM  Rhodococcus aetherivorans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017148.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05305.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Rhodococcus aetherivorans"
                     /db_xref="taxon:191292"
     Protein         1..137
                     /product="DUF732 domain-containing protein"
                     /calculated_mol_wt=13685
ORIGIN      
        1 mravwprgrw arilagfgvl attagcagta asedsaaaip vtvpmaaapv eaealdgpal
       61 rfkqalaeag laagvpdetl valvrgtcaq laaglpeeqi lgsvrsvaaf aasvsrtalq
      121 gddaarfyvg aaretyc
//
LOCUS       WP_235194103             357 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4185 domain-containing protein [Rhodococcus aetherivorans].
ACCESSION   WP_235194103
VERSION     WP_235194103.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus aetherivorans
  ORGANISM  Rhodococcus aetherivorans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025182.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13810.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Rhodococcus aetherivorans"
                     /db_xref="taxon:191292"
     Protein         1..357
                     /product="DUF4185 domain-containing protein"
                     /calculated_mol_wt=38571
     Region          28..352
                     /region_name="DUF4185"
                     /note="Domain of unknown function (DUF4185); pfam13810"
                     /db_xref="CDD:433495"
ORIGIN      
        1 mpgrrrdrsr rsppgptrtv awvtgprspn rtdtrfsvsg tdlgimwdng gtgpgrqvla
       61 afgdtfgdcs vegdewrrni lmrsgdtels dgiavpdprp gdrysgapvl ssdpnfarev
      121 lgsvgidgve ttvvptagis vggtqyinfm svrawgepge wwtnasavay stdngetwtv
      181 dpatarmntp vevpgvqqla tgnsnfqqha yvkhegyvyd fgtpdgrfgp ahvsrvpeaq
      241 irdltayefw tgthwilggi daavpvvdap vgemsvhwtg stfvllygne ergqiemrts
      301 arpegpwsap ravvtgaqig glyapyihpw ssgndlyfva srwsdynvml lrttvag
//
LOCUS       WP_235194045             366 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Rhodococcus aetherivorans].
ACCESSION   WP_235194045
VERSION     WP_235194045.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus aetherivorans
  ORGANISM  Rhodococcus aetherivorans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Rhodococcus aetherivorans"
                     /db_xref="taxon:191292"
     Protein         1..366
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=39105
     Region          5..344
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mtllspdgay ggparvaldq srelrcrghd vtlaaatrgf pvvptevndv pvqlfpartl
       61 lpgsgfaglg apglgrwfrr cradfdlvhv hlgrdlvtlp vavtalrhri pyavqthgmv
      121 vpsrhplatp ldaiwtrkvl lsagavfhlt prereqliav agpdlaleql rngipdlpvr
      181 aptasgppev lfaarlhprk rptvfvemar allatgadar ftligpdqge gsavlaaign
      241 esrirwsgpv dpaqmrrrva catvyvlpsv repypmgvle amsvgvpviv gtdcglaplv
      301 ertgsgivta pdvpaltaav rtllvdrtla tdmgerarat vrrelgmapv crhledtysr
      361 ligwka
//
LOCUS       WP_235194141             701 aa            linear   BCT 02-MAR-2025
DEFINITION  HDOD domain-containing protein [Janthinobacterium lividum].
ACCESSION   WP_235194141
VERSION     WP_235194141.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium lividum
  ORGANISM  Janthinobacterium lividum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020252.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08668.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Janthinobacterium lividum"
                     /db_xref="taxon:29581"
     Protein         1..701
                     /product="HDOD domain-containing protein"
                     /calculated_mol_wt=74966
     Region          1..222
                     /region_name="HDOD"
                     /note="HD-like signal output (HDOD) domain, no enzymatic
                     activity [Signal transduction mechanisms]; COG1639"
                     /db_xref="CDD:441246"
     Region          182..679
                     /region_name="COG4251"
                     /note="Bacteriophytochrome (light-regulated signal
                     transduction histidine kinase) [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443393"
     Region          <475..679
                     /region_name="NtrB"
                     /note="Signal transduction histidine kinase NtrB, nitrogen
                     specific [Signal transduction mechanisms]; COG3852"
                     /db_xref="CDD:443061"
ORIGIN      
        1 mpqillklia hlqaddagmp elaaliakda gmtskilgva nssayhrqsk vvsleqslvs
       61 lgtdmiktlv isesvfqtfn sfphsgstdl rafwksslsa avmaralaka mayphaeeay
      121 lagllhnvgr lallatapke yafnftardd aalcaveqrt lqithaeaga wlierwhlds
      181 fladsvlyhh eplarleash plirivrlah llcchaddad eaesitqaas lcaldvetld
      241 dlagsvarqv eqaaqhlgid lagaddiatp payappavdp vqrrlsdevr nmvlvsevgq
      301 tfarqqgess lleaitrsar ilfdfdtavi llqnatghal vgvaagehqq rlagfsipla
      361 kggplaasai ecqlaflkrd mpalgiveeq lfrilgtdsl vcvplasgqr slgvliggva
      421 awqipacqkr egflrayanq aataletais arglarrqld hvaeeyraas rrvvhevnnp
      481 lsiiknylsv ldhklekqep vsgemailne eidrvgqlig gladlqpaea ngvtdcarvv
      541 ddvlrlfrat dflppkievv trmqdapcev eadadmlkqi llnllknave alpdggriev
      601 anrghvnrdr rlylelcvsd ngaglapevl anlfspvrss kegahhglgl sivhdlvtrl
      661 hgvigcrssk sgtsfeillp iplpasaaaa lpapgntals s
//
LOCUS       WP_235194175             173 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Janthinobacterium lividum].
ACCESSION   WP_235194175
VERSION     WP_235194175.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium lividum
  ORGANISM  Janthinobacterium lividum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Janthinobacterium lividum"
                     /db_xref="taxon:29581"
     Protein         1..173
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=18939
     Region          37..167
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(38..40,54,71..73)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133413"
ORIGIN      
        1 mhhhppfdiq agfklivehg vvvtrigkhk kisgevmkig elakrsglaa stirfyesrg
       61 llkavsrqsn gyrdypleav avlsiisdaq qagfsldeik qvlpedsssw khdelmaalk
      121 kkiadiesle vrlaqnkahl lsliqlinak pddvdckdna arvmesmgig skn
//
LOCUS       WP_235194183             694 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Janthinobacterium lividum].
ACCESSION   WP_235194183
VERSION     WP_235194183.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium lividum
  ORGANISM  Janthinobacterium lividum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Janthinobacterium lividum"
                     /db_xref="taxon:29581"
     Protein         1..694
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=77607
     Region          2..280
                     /region_name="EPS_HpsE"
                     /note="hormogonium polysaccharide biosynthesis
                     glycosyltransferase HpsE; NF038302"
                     /db_xref="CDD:439602"
     Region          314..690
                     /region_name="GT4_PimA-like"
                     /note="phosphatidyl-myo-inositol mannosyltransferase;
                     cd03801"
                     /db_xref="CDD:340831"
ORIGIN      
        1 mltvlmatyn gagtlpqvlr aymglrapvg gwrliiadng stdataqvia afrgrlplrs
       61 vyvarrgrsp alngavehal rssgdggelf vfgdddampa sdwlcrlqds arahpgyalf
      121 ggaivpawre qpqdwllrlt pvgltwgits pdlrdapiyp glvwganmai rrrifeagar
      181 ydesigpqga syamgsetrl nlemhaagnp swfcpqakva hiiraqqvqr awilrramlf
      241 grgqcrlatf apsvellgvp rwmlaryvrd slgavrawlr rdhadlflrq werawlrgff
      301 heawrgrrkr lprivissys gelggmelrm aqeakvlgas gydsvlalrr fpgftawvqg
      361 lraqhlqvrv yepplflehw awrrwnwlra rvtgawrlrr lrpdlvhvaf cwtsygasil
      421 wlarqcrlpa visvhnafpl eafsdwqrpr lqeafrtvkg vyavspsamr hflelyrgml
      481 npetrlavip ngvdtdtfia sperrilarr qlgvpadalv lgcvarlsaq krpqallalf
      541 arlakqfpnl ylvlvgtgpl eamlrlqaqq sglqerivfa gfqqhvellm pafdlhvlls
      601 knegfgiati eamacgvpav gtdvpgthdi lhdsegglll piedehaaca avaqllldap
      661 rrarmgrlar eetvqrysmp rlerqlrafy aglv
//
LOCUS       WP_235194234              99 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein [Janthinobacterium lividum].
ACCESSION   WP_235194234
VERSION     WP_235194234.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium lividum
  ORGANISM  Janthinobacterium lividum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (residues 1 to 99)
  AUTHORS   Linderoth,N.A., Julien,B., Flick,K.E., Calendar,R. and
            Christie,G.E.
  TITLE     Molecular cloning and characterization of bacteriophage P2 genes R
            and S involved in tail completion
  JOURNAL   Virology 200 (2), 347-359 (1994)
   PUBMED   8178426
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018586.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06891.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Janthinobacterium lividum"
                     /db_xref="taxon:29581"
     Protein         1..99
                     /product="phage tail protein"
                     /calculated_mol_wt=11177
     Region          21..94
                     /region_name="P2_Phage_GpR"
                     /note="P2 phage tail completion protein R (GpR);
                     pfam06891"
                     /db_xref="CDD:429177"
ORIGIN      
        1 mnvrvvaerr ggahrvdisl armaaaipdl qrnhdrllvf adegnvvali awlkvhqldl
       61 mvneetrkhg iafevdfnnh etvdisikld ltergrqdr
//
LOCUS       WP_235194240             352 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase domain-containing protein [Janthinobacterium
            lividum].
ACCESSION   WP_235194240
VERSION     WP_235194240.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium lividum
  ORGANISM  Janthinobacterium lividum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024880.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13489.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Janthinobacterium lividum"
                     /db_xref="taxon:29581"
     Protein         1..352
                     /product="methyltransferase domain-containing protein"
                     /calculated_mol_wt=37541
     Region          34..94
                     /region_name="dimerization2"
                     /note="dimerization domain; cl06920"
                     /db_xref="CDD:471544"
     Region          184..284
                     /region_name="UbiG"
                     /note="2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,
                     4-benzoquinol methylase [Coenzyme transport and
                     metabolism]; COG2227"
                     /db_xref="CDD:441829"
ORIGIN      
        1 mptsskgstm pftsqhtlqp ywdlavapvq adglaaalel gifdvlatph tpaqlagtls
       61 lhaphtalll ellwsmqlle rdgadadaqr yrctsatlqy fcrnsvafcg dawlyrlhal
      121 rhfatqlstl vrdggkaapy ntanginwaa aaqqqigqeq ravtmraals vmqriapfad
      181 gntplrlldv gggpgwvaia laqahaglhg cvfdwpetva vaaaniahaq lsnrletvgg
      241 dlgcddigsg ydliwcssvl hfvpdmaaal rkmqaalkpg gvlvcvqaei apapgdaarv
      301 lpyylpmrml grtvtrhgel aqllrdtgwk qveqygasdf pmapvqvlia ra
//
LOCUS       WP_235194272             893 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar filament capping protein FliD [Janthinobacterium
            lividum].
ACCESSION   WP_235194272
VERSION     WP_235194272.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium lividum
  ORGANISM  Janthinobacterium lividum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (residues 1 to 893)
  AUTHORS   Tasteyre,A., Karjalainen,T., Avesani,V., Delmee,M., Collignon,A.,
            Bourlioux,P. and Barc,M.C.
  TITLE     Molecular characterization of fliD gene encoding flagellar cap and
            its expression among Clostridium difficile isolates from different
            serogroups
  JOURNAL   J Clin Microbiol 39 (3), 1178-1183 (2001)
   PUBMED   11230454
REFERENCE   2  (residues 1 to 893)
  AUTHORS   Arora,S.K., Ritchings,B.W., Almira,E.C., Lory,S. and Ramphal,R.
  TITLE     The Pseudomonas aeruginosa flagellar cap protein, FliD, is
            responsible for mucin adhesion
  JOURNAL   Infect Immun 66 (3), 1000-1007 (1998)
   PUBMED   9488388
REFERENCE   3  (residues 1 to 893)
  AUTHORS   Chen,L. and Helmann,J.D.
  TITLE     The Bacillus subtilis sigma D-dependent operon encoding the
            flagellar proteins FliD, FliS, and FliT
  JOURNAL   J Bacteriol 176 (11), 3093-3101 (1994)
   PUBMED   8195064
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07195.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..893
                     /organism="Janthinobacterium lividum"
                     /db_xref="taxon:29581"
     gene            1..893
                     /gene="fliD"
     Protein         1..893
                     /product="flagellar filament capping protein FliD"
                     /GO_component="GO:0009288 - bacterial-type flagellum
                     [Evidence IEA]"
                     /GO_process="GO:0007155 - cell adhesion [Evidence IEA]"
                     /calculated_mol_wt=88364
     Region          17..113
                     /region_name="FliD_N"
                     /note="Flagellar hook-associated protein 2 N-terminus;
                     pfam02465"
                     /db_xref="CDD:460566"
     Region          <48..845
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          315..615
                     /region_name="FliD"
                     /note="Flagellar capping protein FliD [Cell motility];
                     COG1345"
                     /db_xref="CDD:440956"
ORIGIN      
        1 maitptissp gigagasgld vnalieklma aeavplngyd kktasyqakl samgtlsgav
       61 safqgsltgl snsanfravs atpadltvmt asagakavag nyninvtqla qsqtltsggl
      121 snklstigsg akttisfqlg slsggtfgla gtalsaatmq ngisngslil ngtaiptdsg
      181 tksaralada inaksnttgv tataqptnsp atlfsgfgnv atgadgtytl svggveittq
      241 gngvgagagl taasldttla gpnavsnala aanitvtgka adgslkftra dgsnleieev
      301 vtgtvsggig hatgaattgs natfgssvtl sssnaspili agsnpaaagl tagsggayig
      361 tsfaqdgtqa tgsvvidstn ntlqgirdai nnaglgvtas ivsdgsdnpy hlvlsstktg
      421 anstmkisla asegqavdpa lanllsydpa gtqnlkqnsa aqntllsvng ipitsssnsi
      481 dsaiegvtln vikvgstsms vakdtstvkn sinsfvkayn dlntaiaklt sydaetkkgg
      541 vllgdstaqs iqsqlrrqls ssitglsggl sslsqvgisf qkdgslaldg tkldkaissn
      601 fgdigglfsa lgkttdstvs fnsstaatkp gtyaliistm asqgslksta plpasttias
      661 dttwsvtlnd tdpsaaknta kvtipagtyt pkqlasllqs singvkafsd tgstvtaave
      721 adgtlkiass rygsvsnfsm asltgtpvad lfgaatsvkg tdvagtlggq pvvgsgqtlt
      781 gapgssaegl kvditggtvg drgtvsfsqg yayqlnnlat sflgtdgilt nrskgindsi
      841 kavatqrdkf serlgdvear yraqftrldv sltklqstqs yltqqlaaia anr
//
LOCUS       WP_235194287            1006 aa            linear   BCT 02-MAR-2025
DEFINITION  PAS domain-containing protein [Janthinobacterium lividum].
ACCESSION   WP_235194287
VERSION     WP_235194287.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium lividum
  ORGANISM  Janthinobacterium lividum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (residues 1 to 1006)
  AUTHORS   Hefti,M.H., Francoijs,K.J., de Vries,S.C., Dixon,R. and Vervoort,J.
  TITLE     The PAS fold. A redefinition of the PAS domain based upon
            structural prediction
  JOURNAL   Eur J Biochem 271 (6), 1198-1208 (2004)
   PUBMED   15009198
REFERENCE   2  (residues 1 to 1006)
  AUTHORS   Ponting,C.P. and Aravind,L.
  TITLE     PAS: a multifunctional domain family comes to light
  JOURNAL   Curr Biol 7 (11), R674-R677 (1997)
   PUBMED   9382818
REFERENCE   3  (residues 1 to 1006)
  AUTHORS   Zhulin,I.B., Taylor,B.L. and Dixon,R.
  TITLE     PAS domain S-boxes in Archaea, Bacteria and sensors for oxygen and
            redox
  JOURNAL   Trends Biochem Sci 22 (9), 331-333 (1997)
   PUBMED   9301332
REFERENCE   4  (residues 1 to 1006)
  AUTHORS   Borgstahl,G.E., Williams,D.R. and Getzoff,E.D.
  TITLE     1.4 A structure of photoactive yellow protein, a cytosolic
            photoreceptor: unusual fold, active site, and chromophore
  JOURNAL   Biochemistry 34 (19), 6278-6287 (1995)
   PUBMED   7756254
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020037.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08448.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Janthinobacterium lividum"
                     /db_xref="taxon:29581"
     Protein         1..1006
                     /product="PAS domain-containing protein"
                     /calculated_mol_wt=112721
     Region          <115..192
                     /region_name="PDC1_DGC_like"
                     /note="first PDC (PhoQ/DcuS/CitA) domain of
                     diguanylate-cyclase and similar domains; cd12914"
                     /db_xref="CDD:350339"
     Region          194..287
                     /region_name="PDC2_DGC_like"
                     /note="second PDC (PhoQ/DcuS/CitA) domain of
                     diguanylate-cyclase and similar domains; cd12915"
                     /db_xref="CDD:350340"
     Region          359..450
                     /region_name="PAS_4"
                     /note="PAS fold; pfam08448"
                     /db_xref="CDD:312075"
     Region          453..712
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          587..>1000
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 miaitrplqr larrlyrisl vplfalilll alwaavyyqv gqerasavrd avaasqslar
       61 tladhtsftl rqtdhatqlf klkyeetdgg lrlneftrrq glldsvlpsk lelpialida
      121 qgnvidsaha ylpenlaaqp ffralaanas dtvlvdtpml dadgkrwtir larrlndarg
      181 rfagaivihv dptyfvddyd rlnldehgal mlvardsglt vgrigeqlil sdridfrmpg
      241 pprhapeell ieppvdatpr iysyrelpry pllavvgvsr avalarfehr rllyvgalla
      301 asvliagfta llmrqsarlr rsirqatetq allraahhgs ldsvlllkaw rpapgkpved
      361 fifadinera admlgkprse llgqrvlahm pllrgerffq rfvlvmetrq pledefeltl
      421 asgatrwlrh qvvpitdgva vtsrdisark hdelalqdnr sflqslidhl pvlvyvksar
      481 penfgqmevw nkaaeditgh laadvigktd cqafppdfgl hdaeddrail aehgvidhte
      541 kplrladgsl rylravsvpv fderqqiehi lciaedisqr rqqelelrqk qaelaavnda
      601 splglvrldr qrrctyvnrt fesitglpra aalgagwtsa lhpddyplmh valeqltrsh
      661 apfqstlrcl qrdgrlvwvs vkiapilidg kiegyvgtld dittlresev allesearlr
      721 tiadtlpami ayidadqvyr flniayeref gltgrqalgk rvrdtvgear yrtvapyier
      781 vlagetlsfe eedekegier cmeviyipqi gedklqvvgf hvmrqditvq krekqrllkl
      841 aqvdaltgls nragfqqkls damhasrqqq hlmavmymdi drfkpvndth ghgtgdallr
      901 afaqrlthtm ratdiiarlg gdeftiimeq itrpddaavl aekivaamqq pfeldgitvr
      961 isasiglafy rdedispavl lqradvllyk akqdgrntyr agalta
//
LOCUS       WP_235194341             324 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Janthinobacterium lividum].
ACCESSION   WP_235194341
VERSION     WP_235194341.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium lividum
  ORGANISM  Janthinobacterium lividum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (residues 1 to 324)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 324)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019348.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07728.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Janthinobacterium lividum"
                     /db_xref="taxon:29581"
     Protein         1..324
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=36368
     Region          18..324
                     /region_name="PD_CobS"
                     /note="cobaltochelatase, CobS subunit; TIGR01650"
                     /db_xref="CDD:130711"
ORIGIN      
        1 mpdsrqhpta aaaqtlqsvr slfdidsdll vpvfterdph vpdidpayrf nkdvtlaila
       61 gfthnrrvmv qglhgtgkst hieqvaarln wpcvrvnldg hisrldlvgk daivlreqqq
      121 vtefqegivp wslqrpvali fdeydagrpd vmfviqrile rdgkftlldq nrvitphphf
      181 rlfatsntvg lgnlngmyhg tqvlnhaqid rwnivatlny lpqeeetqiv larvpamnde
      241 agrqlassmv avasltrhgy aagdlaclms prtvitwaen cqifrdpala frlsflnkcd
      301 eaerpmvaey yqrcfneell asqa
//
LOCUS       WP_235194359             209 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5610 domain-containing protein [Janthinobacterium lividum].
ACCESSION   WP_235194359
VERSION     WP_235194359.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium lividum
  ORGANISM  Janthinobacterium lividum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037817.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18433.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Janthinobacterium lividum"
                     /db_xref="taxon:29581"
     Protein         1..209
                     /product="DUF5610 domain-containing protein"
                     /calculated_mol_wt=21790
     Region          66..184
                     /region_name="DUF5610"
                     /note="Domain of unknown function (DUF5610); pfam18433"
                     /db_xref="CDD:436498"
ORIGIN      
        1 msipiaaggn snpsvtsvst gvagkddkvq qkdgvnaems vndrtklqln asimqaslnv
       61 sigsenepla llyktaitni nealkgqygd daiqnaasqd nsaeatasri vslstgffda
      121 fkkqnpdldd daaltkfmdt isggmekgfk eardileglk vlggdiagni dktyelvqkg
      181 yadfiaahss kkddavkpda tkpadskaa
//
LOCUS       WP_235194127             397 aa            linear   BCT 02-MAR-2025
DEFINITION  Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal
            domain [Rhodococcus aetherivorans].
ACCESSION   WP_235194127
VERSION     WP_235194127.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus aetherivorans
  ORGANISM  Rhodococcus aetherivorans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 397)
  AUTHORS   Baumer,S., Ide,T., Jacobi,C., Johann,A., Gottschalk,G. and
            Deppenmeier,U.
  TITLE     The F420H2 dehydrogenase from Methanosarcina mazei is a
            Redox-driven proton pump closely related to NADH dehydrogenases
  JOURNAL   J Biol Chem 275 (24), 17968-17973 (2000)
   PUBMED   10751389
REFERENCE   2  (residues 1 to 397)
  AUTHORS   Alex,L.A., Reeve,J.N., Orme-Johnson,W.H. and Walsh,C.T.
  TITLE     Cloning, sequence determination, and expression of the genes
            encoding the subunits of the nickel-containing
            8-hydroxy-5-deazaflavin reducing hydrogenase from Methanobacterium
            thermoautotrophicum delta H
  JOURNAL   Biochemistry 29 (31), 7237-7244 (1990)
   PUBMED   2207102
REFERENCE   3  (residues 1 to 397)
  AUTHORS   Shuber,A.P., Orr,E.C., Recny,M.A., Schendel,P.F., May,H.D.,
            Schauer,N.L. and Ferry,J.G.
  TITLE     Cloning, expression, and nucleotide sequence of the formate
            dehydrogenase genes from Methanobacterium formicicum
  JOURNAL   J Biol Chem 261 (28), 12942-12947 (1986)
   PUBMED   3531194
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016328.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04432.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Rhodococcus aetherivorans"
                     /db_xref="taxon:191292"
     Protein         1..397
                     /product="Coenzyme F420 hydrogenase/dehydrogenase, beta
                     subunit C-terminal domain"
                     /calculated_mol_wt=42683
     Region          57..322
                     /region_name="FrhB"
                     /note="Coenzyme F420-reducing hydrogenase, beta subunit
                     [Energy production and conversion]; COG1035"
                     /db_xref="CDD:440658"
ORIGIN      
        1 mtfnddgylr ptwdddvaie iepqavsefs racpgvtvea rlieggsrhs ifgpvisawe
       61 awaidpsirh sgssggtlta ivswlldtgq ytssagvvqs padarvstav alttkeealk
      121 sagsryapva aagccrldsa nesifvgkpc dvsavkqlld argserplll sffcagtpsq
      181 faterliqhl gidtneerve ylryrgngwp gdftvrtdgg rtvtasynds wgrflgpttq
      241 wrckicpdgi gesaditagd fwhadgrgyp dfgdregisv lvartalgds iirraissgv
      301 lgakpadlsq vaavqplqvr rrttlagrma gatlggrrlp ryrgfqllrt arlaplqtlr
      361 savgsfvrvr eeaerrpvkd rrrkvnatst afsgase
//
LOCUS       WP_235194670              73 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2553 family protein [Shouchella xiaoxiensis].
ACCESSION   WP_235194670
VERSION     WP_235194670.1
KEYWORDS    RefSeq.
SOURCE      Shouchella xiaoxiensis
  ORGANISM  Shouchella xiaoxiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Shouchella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022286.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10830.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Shouchella xiaoxiensis"
                     /db_xref="taxon:766895"
     Protein         1..73
                     /product="DUF2553 family protein"
                     /calculated_mol_wt=8432
     Region          2..69
                     /region_name="DUF2553"
                     /note="Protein of unknown function (DUF2553); pfam10830"
                     /db_xref="CDD:371262"
ORIGIN      
        1 mekvnvtqkv vakyeeghlk lyldgawige vietnqglqh tmnagfsfee dqifqmqnes
       61 wnevksfied swh
//
LOCUS       WP_235194794              48 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4351 domain-containing protein [Microcystis aeruginosa].
ACCESSION   WP_235194794
VERSION     WP_235194794.1
KEYWORDS    RefSeq.
SOURCE      Microcystis aeruginosa
  ORGANISM  Microcystis aeruginosa
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Oscillatoriophycideae; Chroococcales; Microcystaceae; Microcystis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025619.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14261.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..48
                     /organism="Microcystis aeruginosa"
                     /db_xref="taxon:1126"
     Protein         1..48
                     /product="DUF4351 domain-containing protein"
                     /calculated_mol_wt=5442
     Region          <1..47
                     /region_name="DUF4351"
                     /note="Domain of unknown function (DUF4351); pfam14261"
                     /db_xref="CDD:433818"
ORIGIN      
        1 mrqlnlklgs iplkveqkik qlnpnqldnl alalldfsdl edlqqwln
//
LOCUS       WP_235194941             105 aa            linear   BCT 02-MAR-2025
DEFINITION  type II toxin-antitoxin system HicB family antitoxin, partial
            [Microcystis aeruginosa].
ACCESSION   WP_235194941
VERSION     WP_235194941.1
KEYWORDS    RefSeq.
SOURCE      Microcystis aeruginosa
  ORGANISM  Microcystis aeruginosa
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Oscillatoriophycideae; Chroococcales; Microcystaceae; Microcystis.
REFERENCE   1  (residues 1 to 105)
  AUTHORS   Winter,A.J., Williams,C., Isupov,M.N., Crocker,H., Gromova,M.,
            Marsh,P., Wilkinson,O.J., Dillingham,M.S., Harmer,N.J.,
            Titball,R.W. and Crump,M.P.
  TITLE     The molecular basis of protein toxin HicA-dependent binding of the
            protein antitoxin HicB to DNA
  JOURNAL   J Biol Chem 293 (50), 19429-19440 (2018)
   PUBMED   30337369
REFERENCE   2  (residues 1 to 105)
  AUTHORS   Hall,A.M., Gollan,B. and Helaine,S.
  TITLE     Toxin-antitoxin systems: reversible toxicity
  JOURNAL   Curr Opin Microbiol 36, 102-110 (2017)
   PUBMED   28279904
REFERENCE   3  (residues 1 to 105)
  AUTHORS   Bibi-Triki,S., Li de la Sierra-Gallay,I., Lazar,N., Leroy,A., Van
            Tilbeurgh,H., Sebbane,F. and Pradel,E.
  TITLE     Functional and structural analysis of HicA3-HicB3, a novel
            toxin-antitoxin system of Yersinia pestis
  JOURNAL   J Bacteriol 196 (21), 3712-3723 (2014)
   PUBMED   25112480
REFERENCE   4  (residues 1 to 105)
  AUTHORS   Makarova,K.S., Grishin,N.V. and Koonin,E.V.
  TITLE     The HicAB cassette, a putative novel, RNA-targeting toxin-antitoxin
            system in archaea and bacteria
  JOURNAL   Bioinformatics 22 (21), 2581-2584 (2006)
   PUBMED   16895922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10003996
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Microcystis aeruginosa"
                     /db_xref="taxon:1126"
     Protein         <1..105
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /GO_component="GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA]"
     Region          44..96
                     /region_name="HicB"
                     /note="Antitoxin component HicB of the HicAB
                     toxin-antitoxin system [Defense mechanisms]; COG1598"
                     /db_xref="CDD:441206"
ORIGIN      
        1 icvmglvrrs dnivtyygdl ekkmillnyc ekalqkaqyk rlndgtwfae iegfqgvwgn
       61 gltveecrqd llevleewii lklqdgdplp iidgleikvt tvaev
//
LOCUS       WP_235194977             366 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Aeromonas
            hydrophila].
ACCESSION   WP_235194977
VERSION     WP_235194977.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas hydrophila
  ORGANISM  Aeromonas hydrophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 366)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Aeromonas hydrophila"
                     /db_xref="taxon:644"
     Protein         1..366
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=41548
     Region          <25..366
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mknenvdtif fsnekfdesy siitpvksee ydisffdqik lssamnlhlg irkdwiahkp
       61 gqskprttgn kehryighny svlsmglgld ykpiesttvs yklgkgfrtp taqelyfdfg
      121 tdgsanrlep nnelkeesai tnevslkiek giinaaingy htkysdfidl kqserltpnp
      181 wyaqwgpefl sqnhlqytni esaqingida sikldanifl sdfsienkis yqhgrasngd
      241 slmavqplkn itvlkysssn gefdidgmlt yskgkklsda irngkewkyv ndsyfvfdli
      301 gkyqitdfvf fragifnvfn reyttwdamr svpefgttnm ideqgkglsr ltspgrnysa
      361 elafif
//
LOCUS       WP_235195015             304 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Aeromonas
            hydrophila].
ACCESSION   WP_235195015
VERSION     WP_235195015.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas hydrophila
  ORGANISM  Aeromonas hydrophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Aeromonas hydrophila"
                     /db_xref="taxon:644"
     Protein         1..304
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=33488
     Region          1..289
                     /region_name="PRK14997"
                     /note="LysR family transcriptional regulator; Provisional"
                     /db_xref="CDD:184959"
ORIGIN      
        1 mndlylfthv vqrqgftaaa ralgvpksri srrirlleer ldarllqrts rqlsltdage
       61 vlyrhcqaml aeaqageaav rqrqqepsgl vrisvpitia dallarllpa fmaqypkvrl
      121 amqasnrqvd lleegldvvi rgvafeqpps slvqvplctv qwgvlatpvw lsrhsalahp
      181 rqlegedall fsslerqadl lrlrhdsges eevavnvllr sdnvqtlkqa alaglgmvgl
      241 plyacvsela dgrlqqllpe wrpkdgklvm lyparrglsp avralidfik aklpallaet
      301 gqpr
//
LOCUS       WP_235195020             165 aa            linear   BCT 02-MAR-2025
DEFINITION  phage regulatory CII family protein [Aeromonas hydrophila].
ACCESSION   WP_235195020
VERSION     WP_235195020.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas hydrophila
  ORGANISM  Aeromonas hydrophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 165)
  AUTHORS   Richardson,H., Puspurs,A. and Egan,J.B.
  TITLE     Control of gene expression in the P2-related temperate coliphage
            186. VI. Sequence analysis of the early lytic region
  JOURNAL   J Mol Biol 206 (1), 251-255 (1989)
   PUBMED   2704042
REFERENCE   2  (residues 1 to 165)
  AUTHORS   Kalionis,B., Dodd,I.B. and Egan,J.B.
  TITLE     Control of gene expression in the P2-related template coliphages.
            III. DNA sequence of the major control region of phage 186
  JOURNAL   J Mol Biol 191 (2), 199-209 (1986)
   PUBMED   3806670
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018587.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06892.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Aeromonas hydrophila"
                     /db_xref="taxon:644"
     Protein         1..165
                     /product="phage regulatory CII family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=17250
     Region          5..145
                     /region_name="Phage_CP76"
                     /note="Phage regulatory protein CII (CP76); cl06105"
                     /db_xref="CDD:471385"
ORIGIN      
        1 mshshfaaac dlfkqahnis qlaeaigmts hvlhnkfnpa cerhnltaqd liaiyqatgd
       61 dtlfdgllfd cgltavrlpg aaqvapeara qqalnasaqi lgvtaqatti lagdrvtknn
      121 rntvvtgiwa giehlvllat evedrfhavp glacaadmar aalga
//
LOCUS       WP_235195063             251 aa            linear   BCT 02-MAR-2025
DEFINITION  GH12 family glycosyl hydrolase domain-containing protein [Lonsdalea
            quercina].
ACCESSION   WP_235195063
VERSION     WP_235195063.1
KEYWORDS    RefSeq.
SOURCE      Lonsdalea quercina
  ORGANISM  Lonsdalea quercina
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Lonsdalea.
REFERENCE   1  (residues 1 to 251)
  AUTHORS   Sulzenbacher,G., Shareck,F., Morosoli,R., Dupont,C. and Davies,G.J.
  TITLE     The Streptomyces lividans family 12 endoglucanase: construction of
            the catalytic cre, expression, and X-ray structure at 1.75 A
            resolution
  JOURNAL   Biochemistry 36 (51), 16032-16039 (1997)
   PUBMED   9440876
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013806.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01670.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Lonsdalea quercina"
                     /db_xref="taxon:71657"
     Protein         1..251
                     /product="GH12 family glycosyl hydrolase domain-containing
                     protein"
                     /GO_function="GO:0008810 - cellulase activity [Evidence
                     IEA]"
                     /GO_process="GO:0000272 - polysaccharide catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=27516
     Region          42..250
                     /region_name="Glyco_hydro_12"
                     /note="Glycosyl hydrolase family 12; cl03302"
                     /db_xref="CDD:413657"
ORIGIN      
        1 mkkkvsfasi avatllasgt alaasssedn aklylpsgid yvynntwgks avpngqqsvy
       61 ansatdmgws wswpsdansv kgypsivhgw hwttgygtnt glpvrlsenk ninttaawsf
      121 snvsgtynvs ydiwfhsdnn anwwstptde lmiwmnstna spagsyvntv tiggipwdvy
      181 kgtvsswnvy sfviksnqts anlniknftd ylvnakqwms ntkyissief gtelykgsgt
      241 fkvskwsvsi k
//
LOCUS       WP_235195042              90 aa            linear   BCT 02-MAR-2025
DEFINITION  SGNH/GDSL hydrolase family protein, partial [Aeromonas hydrophila].
ACCESSION   WP_235195042
VERSION     WP_235195042.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas hydrophila
  ORGANISM  Aeromonas hydrophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 90)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 90)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00657.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Aeromonas hydrophila"
                     /db_xref="taxon:644"
     Protein         1..>90
                     /product="SGNH/GDSL hydrolase family protein"
                     /GO_function="GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
     Region          1..>89
                     /region_name="COG3240"
                     /note="Phospholipase/lecithinase/hemolysin [Lipid
                     transport and metabolism, General function prediction
                     only]"
                     /db_xref="CDD:442472"
ORIGIN      
        1 mkkwfvcllg lfaltvqaad srpafsrivm fgdslsdtgk myskmrgylp ssppyyqgrf
       61 sngpvwleql trqfpgltia neaeggatav
//
LOCUS       WP_235195152             156 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: NUDIX domain-containing protein [Exiguobacterium].
ACCESSION   WP_235195152
VERSION     WP_235195152.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium
  ORGANISM  Exiguobacterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Exiguobacterium"
                     /db_xref="taxon:33986"
     Protein         1..156
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=18538
     Region          7..124
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mkfrrrekva iyitreqpeg wellvfhpqs apdsdwqipa gtiedaeiak eaavretlee
       61 sglslatvqy vgeeemrype rmrvhytyfy hahiecqenr wthcvagdgq dcgdffhfaw
      121 lpldritqle rrhhifldrl ihrlernqpy dcrkhg
//
LOCUS       WP_235195220             371 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Exiguobacterium oxidotolerans].
ACCESSION   WP_235195220
VERSION     WP_235195220.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium oxidotolerans
  ORGANISM  Exiguobacterium oxidotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis; Exiguobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Exiguobacterium oxidotolerans"
                     /db_xref="taxon:223958"
     Protein         1..371
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=41247
     Region          23..361
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(44,94..95,97..99,102,126,129..130,133,205,208..209,
                     212..214,217,244,248,293..294,298,302,318,321..322,
                     325..326,329)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mmrfatafvp ayvierlfwe argmsvldvi yaeivfaltq lslelpfgra tdrfgrkwfl
       61 vfgmvaecls famllnaytl taflgamvla gvgaaaisgt eeaflfetle qvgqverfer
      121 tvgrlnavsl mtaglaalig swltqstafe fhykislisl msatlvsltl retrlvvees
      181 tarplrlvwr elrtrpmlir iflfsvlfgt tinfieefwq lsmrdrgipv tgfglvfili
      241 mvaqgvgnll paltkgsltv nlngmlvvff vsvisfsltg masilflfmv fllygqsepm
      301 tssllqtyas akerativsi aswlesvlii ivglgfgfis ewasldiayv ylclvsfvlw
      361 lcvawlskrr e
//
LOCUS       WP_235195200             181 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: imm11 family protein [Exiguobacterium].
ACCESSION   WP_235195200
VERSION     WP_235195200.1
KEYWORDS    RefSeq.
SOURCE      Exiguobacterium
  ORGANISM  Exiguobacterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis.
REFERENCE   1  (residues 1 to 181)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019408.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07791.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Exiguobacterium"
                     /db_xref="taxon:33986"
     Protein         1..181
                     /product="imm11 family protein"
                     /calculated_mol_wt=21269
ORIGIN      
        1 mnkvqvwseq pmgkgwraqc hhqidrhrft tgewflnasl lafsieqdad mlpdvlpnvl
       61 niplvsermk qaleqftpfs vqclrvqlqt rsgwsnyyli nilavrrveh lhktnifrpi
      121 gkkyvyfmte rlvqdslgvh hllrdeltdr ifvssqlary lerltvtgiq fdeinrmeel
      181 i
//
LOCUS       WP_235195305             344 aa            linear   BCT 02-MAR-2025
DEFINITION  3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal
            domain-containing protein [Pseudomonas brassicacearum].
ACCESSION   WP_235195305
VERSION     WP_235195305.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas brassicacearum
  ORGANISM  Pseudomonas brassicacearum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 344)
  AUTHORS   Abbadi,A., Brummel,M., Schutt,B.S., Slabaugh,M.B., Schuch,R. and
            Spener,F.
  TITLE     Reaction mechanism of recombinant 3-oxoacyl-(acyl-carrier-protein)
            synthase III from Cuphea wrightii embryo, a fatty acid synthase
            type II condensing enzyme
  JOURNAL   Biochem J 345 Pt 1 (Pt 1), 153-160 (2000)
   PUBMED   10600651
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020130.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08541.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Pseudomonas brassicacearum"
                     /db_xref="taxon:930166"
     Protein         1..344
                     /product="3-oxoacyl-[acyl-carrier-protein] synthase III
                     C-terminal domain-containing protein"
                     /calculated_mol_wt=37789
     Region          17..317
                     /region_name="cond_enzymes"
                     /note="Condensing enzymes; Family of enzymes that catalyze
                     a (decarboxylating or non-decarboxylating) Claisen-like
                     condensation reaction. Members are share strong structural
                     similarity, and are involved in the synthesis and
                     degradation of fatty acids, and the...; cl09938"
                     /db_xref="CDD:447866"
     Site            order(128,276)
                     /site_type="active"
                     /db_xref="CDD:238201"
     Region          236..319
                     /region_name="ACP_syn_III_C"
                     /note="3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
                     C terminal; pfam08541"
                     /db_xref="CDD:430060"
ORIGIN      
        1 mlktltmkkg iimlghiesi tlhipeqrks laeaalslgl saldvrmfsr fyglenfprq
       61 pgtvddlira lleqfvaahp divtrirhvv hahtvptlrp fhetgrtlld acgfaddtey
      121 csltmghcat slaaveyacs rlregeyall lvgekafhpk vellddttim geaacavlls
      181 rsgahaqvsa rysvqagefs eqkgnepktn pafaeayfgf vcnamrcamq yfdcapdalg
      241 wiaphnvnls swqkiadele iprsriflqn vpryghcfga dpylnlaali rdrqfspgdk
      301 vmlvsvgmga tfsslllelp agneipvfcn lkqypdsrpn kvsa
//
LOCUS       WP_235195373             107 aa            linear   BCT 02-MAR-2025
DEFINITION  Lar family restriction alleviation protein [Pseudomonas
            aeruginosa].
ACCESSION   WP_235195373
VERSION     WP_235195373.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 107)
  AUTHORS   King,G. and Murray,N.E.
  TITLE     Restriction alleviation and modification enhancement by the Rac
            prophage of Escherichia coli K-12
  JOURNAL   Mol Microbiol 16 (4), 769-777 (1995)
   PUBMED   7476171
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025712.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14354.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..107
                     /product="Lar family restriction alleviation protein"
                     /calculated_mol_wt=11753
     Region          3..61
                     /region_name="Lar_restr_allev"
                     /note="Restriction alleviation protein Lar; cl08047"
                     /db_xref="CDD:471789"
ORIGIN      
        1 mselkpcpfc gcsmhlesnr dwhrivgdha lecvfldset vvvpatkeqr diavsdwnar
       61 avpaghvvvs egllrrllds dgidgifdaq qnyaahqelr allneqa
//
LOCUS       WP_235195432              65 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Priestia flexa].
ACCESSION   WP_235195432
VERSION     WP_235195432.1
KEYWORDS    RefSeq.
SOURCE      Priestia flexa
  ORGANISM  Priestia flexa
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
REFERENCE   1  (residues 1 to 65)
  AUTHORS   Yang,W. and Steitz,T.A.
  TITLE     Crystal structure of the site-specific recombinase gamma delta
            resolvase complexed with a 34 bp cleavage site
  JOURNAL   Cell 82 (2), 193-207 (1995)
   PUBMED   7628011
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014814.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02796.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Priestia flexa"
                     /db_xref="taxon:86664"
     Protein         1..65
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0000150 - DNA strand exchange activity
                     [Evidence IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /calculated_mol_wt=7390
ORIGIN      
        1 makkrgafrg kpkkyhaeak gkdrlaykev vrllgenesv mnihretgla rntiyaikke
       61 feskk
//
LOCUS       WP_235195495             406 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase [Pseudomonas aeruginosa].
ACCESSION   WP_235195495
VERSION     WP_235195495.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025059.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13679.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..406
                     /product="methyltransferase"
                     /calculated_mol_wt=45364
     Region          <32..373
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          113..234
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
ORIGIN      
        1 msetfplltg dalsqrflal dafllehqrl wrprpfsept maweaehael aswlrgrsle
       61 qadaehnqpt rlaapapypq laaqaaalgt vgelplaerp qapnrfnvdv pgrkwqqigl
      121 fagrlqfarp vvhwldwcsg kghlgrllah agqpltcleh dpalvadgqr lsdrlglsah
      181 hlrqdvlaad caerllpght pvalhacgel hlrllrlasq agcrqlavap ccynripgpf
      241 yqplsqaagr sllalslddl rlplsetvta sqrvrrqrdq smarrlgfdl lqrelrgidq
      301 ylsvpslpva wlerpyadyc relaalkglp epaardwqal eaagwkrlam vrnlelvral
      361 frrplelwll ldrclylveq gysvrlgefc ptslsprnll ilaers
//
LOCUS       WP_235195549            1186 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: YadA-like family protein [Pandoraea].
ACCESSION   WP_235195549
VERSION     WP_235195549.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea
  ORGANISM  Pandoraea
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
REFERENCE   1  (residues 1 to 1186)
  AUTHORS   Sandt,C.H. and Hill,C.W.
  TITLE     Nonimmune binding of human immunoglobulin A (IgA) and IgG Fc by
            distinct sequence segments of the EibF cell surface protein of
            Escherichia coli
  JOURNAL   Infect Immun 69 (12), 7293-7303 (2001)
   PUBMED   11705900
REFERENCE   2  (residues 1 to 1186)
  AUTHORS   Hoiczyk,E., Roggenkamp,A., Reichenbecher,M., Lupas,A. and
            Heesemann,J.
  TITLE     Structure and sequence analysis of Yersinia YadA and Moraxella
            UspAs reveal a novel class of adhesins
  JOURNAL   EMBO J 19 (22), 5989-5999 (2000)
   PUBMED   11080146
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015831.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03895.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1186
                     /organism="Pandoraea"
                     /db_xref="taxon:93217"
     Protein         1..1186
                     /product="YadA-like family protein"
                     /calculated_mol_wt=119444
     Region          77..>307
                     /region_name="VOMP_auto_Cterm"
                     /note="Vomp family autotransporter C-terminal domain;
                     NF033870"
                     /db_xref="CDD:411434"
     Region          178..218
                     /region_name="YadA_stalk"
                     /note="Coiled stalk of trimeric autotransporter adhesin;
                     pfam05662"
                     /db_xref="CDD:428572"
     Region          427..1185
                     /region_name="Hia"
                     /note="Autotransporter adhesin [Intracellular trafficking,
                     secretion, and vesicular transport, Extracellular
                     structures]; COG5295"
                     /db_xref="CDD:444098"
ORIGIN      
        1 mgnavsakpv kltnladgrd asdavtvrql svayrgltsl ststaslsdg vmslstglsh
       61 vtslvadten viryddesqe svtfgnllsv kpvkltnvad garlndavtv rqlsqtnsgv
      121 aslstgavat nksvnslstg lrkmvgltag ietsvqyddd tqgvvtfgsr vsarpviltn
      181 vaegvnatda vnvrqmsatn srvgslstgm aalsknvgsl stgavslgqg ltslstgata
      241 lsdrvtslst glskatalat dverfvqydt tqrarltlgg tsarapvklg nvadgetprd
      301 avnfgqlgev srhveslstg avvlgqgvts lstgavslgq gltslstgav vlgqgvtsls
      361 tgavvlgqgl tslstgavsl sqgvtslstg lstvaaltad issfakydsd rrdmltlggk
      421 nptapvaltn ladgvrnsda vtvrqlgvtn snvmrlstsm atfeigvgsl stgmksiggt
      481 veslvsemei avqydnatkt klrlgglsrt pvslgnvadg trpndavnaa qlgttnstva
      541 slsttlsglv apgavvrsan grshrtlvag gvaatgehnq dgavtlanva dgeragdavn
      601 faqlsatnrh vgsistsidk rvgalstrln kierlsqgtg ngvqyddgsh skitlgnivt
      661 stpvtltnva dgknpsdavt frqlsttrss vgvlwkrigt tdeqvgslst gmtkaekrlt
      721 mleanaedyv gydgqtrdtl tlgdtvsrrs vrvrnvskgv elgdavnfaq lsetnrtvgt
      781 lstglvrser klrslavdie nsaryddasr gmltlggtga sspvalanva dgthptdavn
      841 frqlsetnrn vtslstglkq masvtpgdsr avvyddlrre rvklggaaas kpvaltnlaa
      901 gvastdavnv sqlqmtdsrv mslstststg igdmliamns lasrlsasvg sqrpptdgds
      961 ggalkqtaep askqasyvsv ndggsskgna rgegasgsga maigvdasav gqgsaalgar
     1021 aatpganava ighaasakea davamgagav asgagavaig anavaqdpgt vsfgapgser
     1081 rltnlapgrr atdaatvgql agvqagvnqv arraysgiaa atalamipev dpgrrvalgv
     1141 gsatfqgqaa vsigasvrft dnlkarlgag isrqgntyaa gvsyqw
//
LOCUS       WP_235195563             436 aa            linear   BCT 02-MAR-2025
DEFINITION  Wadjet anti-phage system protein JetA family protein [Pandoraea sp.
            E26].
ACCESSION   WP_235195563
VERSION     WP_235195563.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea sp. E26
  ORGANISM  Pandoraea sp. E26
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 436)
  AUTHORS   Doron,S., Melamed,S., Ofir,G., Leavitt,A., Lopatina,A., Keren,M.,
            Amitai,G. and Sorek,R.
  TITLE     Systematic discovery of antiphage defense systems in the microbial
            pangenome
  JOURNAL   Science 359 (6379) (2018)
   PUBMED   29371424
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039513.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18982.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Pandoraea sp. E26"
                     /db_xref="taxon:1427365"
     Protein         1..436
                     /product="Wadjet anti-phage system protein JetA family
                     protein"
                     /calculated_mol_wt=49458
ORIGIN      
        1 madyahnltr dalrelllpv vrqyqsvkaq eggddelsra eaddpqalvg mviralltda
       61 wleqfadrtg lvtafrfsrp gklfaealws ldrpsrsrqr nmrgcrnale aalsdrgdah
      121 dlvdayeyae kviedltdgi dyfqelvrhl mqtasvqtqw sefvefldrf qrdyskqlta
      181 dnamlnrqai vqklerlrlv peakfnrmde qlrdiahwav keyvgtsvyd wlltriediv
      241 daacqskqpg flkametylk rvnglalqsm mlragqtrha ylaaiqqvae askeqqdqll
      301 mhigqflapa evrlldpasf klrtaaqrrk avtisvrprp sreerlaaam araeaeafsi
      361 pneevaqllr rdlrifqhpi rvsalptata retlramqav eavrsevgad lsikklptpl
      421 englysgndy eidlkk
//
LOCUS       WP_235195595             540 aa            linear   BCT 02-MAR-2025
DEFINITION  inorganic phosphate transporter [Pseudomonas aeruginosa].
ACCESSION   WP_235195595
VERSION     WP_235195595.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 540)
  AUTHORS   Versaw,W.K. and Metzenberg,R.L.
  TITLE     Repressible cation-phosphate symporters in Neurospora crassa
  JOURNAL   Proc Natl Acad Sci U S A 92 (9), 3884-3887 (1995)
   PUBMED   7732001
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013543.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01384.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..540
                     /product="inorganic phosphate transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0006817 - phosphate ion transport
                     [Evidence IEA]"
                     /calculated_mol_wt=56866
     Region          68..539
                     /region_name="PHO4"
                     /note="Phosphate transporter family; cl27575"
                     /db_xref="CDD:474944"
ORIGIN      
        1 mtsdvlpava vasaagnahk phleqrpgrl tafvffavla tgllfsaysl mqdvddvgsa
       61 ittwtpflll gvallialgf efvngfhdta navatviyth slpphfavvw sgcfnflgvl
      121 lssgavafgi iallpvelil qvgssagfam vfalliaail wnlgtwwlgl passshtlig
      181 siigvgvana lmhgrdgtsg vdwgqatkvg yslllsplig facaalllla lrllvknral
      241 ykapkgkapp pwwirgllil tctgvsfahg sndgqkgmgl imlilvgtlp mayalnrtmp
      301 adqavqfaav aevtqqalvk sapqpapadp rqvlsdyvrs kqaspelipa laaltgsigq
      361 evkgygafsr vpaqamgnvr ndmyltseai hlmdkddvgr fdadtrgklq afkrkiddat
      421 kfiplwvkia vaialglgtm vgwkrivvtv gekigkthlt yaqgasaetv amltigaadl
      481 yglpvstthv lssgvagtma angsglqwkt irnllmawvl tlpaaillsa slywlltrlf
//
LOCUS       WP_235195636             636 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Pseudomonas aeruginosa].
ACCESSION   WP_235195636
VERSION     WP_235195636.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 636)
  AUTHORS   Li,Y., Bahti,P., Shaw,N., Song,G., Chen,S., Zhang,X., Zhang,M.,
            Cheng,C., Yin,J., Zhu,J.Y., Zhang,H., Che,D., Xu,H., Abbas,A.,
            Wang,B.C. and Liu,Z.J.
  TITLE     Crystal structure of a novel non-Pfam protein AF1514 from
            Archeoglobus fulgidus DSM 4304 solved by S-SAD using a Cr X-ray
            source
  JOURNAL   Proteins 71 (4), 2109-2113 (2008)
   PUBMED   18361456
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024977.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13589.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..636
                     /product="ATP-binding protein"
                     /calculated_mol_wt=70524
     Region          37..600
                     /region_name="PRK14083"
                     /note="HSP90 family protein; Provisional"
                     /db_xref="CDD:237603"
ORIGIN      
        1 maesrtgpla certpfierl drdmqssfpq sntpqirrag vdlngvmsvl skhlystptv
       61 alrelvqnah dsilrrrleq pdwqgpsrie vigdsasntv rivdtgaglt eheihaylat
      121 vgvgytrglr qsghedsgli gmfglgflsa fvlarrvsvr ttsyqqpelg fcyvssnaeq
      181 ysvtpmparp vgteitlelq deysaltqaa rlreileryc vllrepihvg gdaqsinpep
      241 ppwrlaadaa lhplqrqrrd lefaarfehd fepicclpvr pdervdvqgl lwiqdggtyg
      301 tsdnrnlsvf lrgmllddda rdllpswagf vggviesnrl tptasredlq rddhyaaiqh
      361 alaesliagl gevarqqpea wrrvllrhne allgaalcde rlfalmmdsl rvptsqgdlp
      421 asellsrgav hvlldndsgf eemlframgv pvahgnryav vpflrrwaqa kgmrlvelgt
      481 eqgnrqlfrl drlperetgw laehlggaee qlviarfspe elplvvvpdr daelkrrled
      541 deadkrista alrlarqftr kldnrqpsrl yvnldnpavq allaavgeer deaahaalll
      601 rsfkviiagq grgqpatsln qalagladsv krllgq
//
LOCUS       WP_235195653             303 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Pseudomonas aeruginosa].
ACCESSION   WP_235195653
VERSION     WP_235195653.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00528.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..303
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=32162
     Region          18..300
                     /region_name="PRK10913"
                     /note="dipeptide ABC transporter permease DppC"
                     /db_xref="CDD:182833"
ORIGIN      
        1 mnamhnapas dpslvypspl kefwqafahn kgalggllfm llivfcalfa pwvapydpse
       61 qfrdflltpp swleggqarf llgtdelgrd llsrlihgar lslliglssv vislipgill
      121 gllagfspnr agplimrlmd imlalpslll avaivailgp glintviaia ivslpayvrl
      181 traavmteln cdyvtasrla gagtlrlmfv cvlpncmapl ivqatlsfss aildaaalgf
      241 lglgvqpptp ewgtmlasar dyierawwvv slpgltills vlainlmgdg lrdaldpklk
      301 naa
//
LOCUS       WP_235195655             250 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Pseudomonas aeruginosa].
ACCESSION   WP_235195655
VERSION     WP_235195655.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024793.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13401.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..250
                     /product="AAA family ATPase"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=27018
     Region          1..244
                     /region_name="COG2842"
                     /note="Bacteriophage DNA transposition protein, AAA+
                     family ATPase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442090"
ORIGIN      
        1 mttpkttqla sgmadiania lcdialekam artstlpglv cfygptgfgk svsaawvanr
       61 rrayyvqaks vwtrkhtlks ilgemgikpa gtipemadqi aeelaasgrp liidemdhlv
      121 aagqvelird lyessqasil ligeemlptk lkkyerfhgr vlswvpaqpv sledarnlap
      181 vyspgvaiad dllahlvkks lgsvrrvavn leqlaeaatv qgrrelelad lqrlnlelyt
      241 gaapsprtsk
//
LOCUS       WP_235195665             144 aa            linear   BCT 02-MAR-2025
DEFINITION  CopD family protein [Pseudomonas aeruginosa].
ACCESSION   WP_235195665
VERSION     WP_235195665.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 144)
  AUTHORS   Cooksey,D.A.
  TITLE     Molecular mechanisms of copper resistance and accumulation in
            bacteria
  JOURNAL   FEMS Microbiol Rev 14 (4), 381-386 (1994)
   PUBMED   7917425
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017262.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05425.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..144
                     /product="CopD family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=15487
     Region          4..>69
                     /region_name="DUF4149"
                     /note="Domain of unknown function (DUF4149); cl46318"
                     /db_xref="CDD:480658"
ORIGIN      
        1 mrtllflhll gaaiwvgghl vlalgilpga lrrrdpqair afeqvyerig ipalllqvvs
       61 glwlaslwlp fdhwfgatsv aralqlklll laatatlgvh arlrlipnld aeslpklgwh
      121 iaaitlvglg fvavgqsfrf ggaf
//
LOCUS       WP_235195669            2233 aa            linear   BCT 02-MAR-2025
DEFINITION  MBG domain-containing protein [Pseudomonas aeruginosa].
ACCESSION   WP_235195669
VERSION     WP_235195669.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037085.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18676.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2233
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..2233
                     /product="MBG domain-containing protein"
                     /calculated_mol_wt=227653
     Region          40..304
                     /region_name="TPS"
                     /note="TPS secretion domain; pfam05860"
                     /db_xref="CDD:461762"
     Region          356..2035
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          2039..2113
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
ORIGIN      
        1 mvrpdsqrgk rtsskagreg rfvlaasstl mfaiasinaa maaptgaqfn pneikisqqg
       61 kttlidqstq raiinwkgfd vsadeavrfn qpgvtsstln rvtagqesvi agrisapgqv
      121 iiynsngvvf sgsakvdvgs litttanisd ehfrqgklif dqpgnpdari vndgsisvae
      181 kglaafvaps vanngvinar lgtvamaagn aatidlygdg lvsiavtdpv trkpqdaqal
      241 vsnggaiqad ggsvlitaeq asrvvdnavn lsgvilargt evregsvalv sksgdiqvag
      301 kidvsgpksg gdvlvsgqqv alastasida rgaaqggsvr iggdfqgrge lpraknatla
      361 kgasidvsat gkgngglavv wsdgntrmdg rilarggaqg gngglvetsg kvnlsiadsa
      421 yvsvaapygn ggtwlldptt lrivasggts gsvggangas gdatvnasvv tgalaggkvt
      481 lsasdrlsve aplitsnlgg asrgleliat gpagavdisa pilfrngsla iraggninfl
      541 sggtpqtsgi vdlgsgtlwm qtstagkisq qagtaliaan lagragsidl tswdnyagnl
      601 alqtfngtlk yrqsnatgvt tsgtvfdpfi nqsmtgtaqn ivssvgtril eansvgttgn
      661 ytltadgnse fdrlvftalp yrrvsgsasf ptndssdylv tnlryqvngs nvtatpngga
      721 psgftvaagn gsvttwtgnw gtswgvkgfg gvigvtdelq ydvgtgltee lifglggkts
      781 rvdtrldlfm regafnsfae raqvemfktt ttagdilsrq qtatltanda trvygdvnpt
      841 ltatmsgina idayvnsqfn dlyqatastt atqassvgqy aitgnangse yfsqryqlvr
      901 qdgkltvtpa qlivsadakt kvygdadptl tyqvsglkns dtaagvlsgn lgrvagenvg
      961 nygilqgglg lntanytlsy vgndlritpa qlnviadakt kvygdldpal tyqvsglkrg
     1021 dtagavlngg slnrvagenv gvyginqggl glvssnyaln yqgnnltitk allnviadak
     1081 tkvygdadps ltyqvsglkn gdtagavlng gslsrvagen vgvyginqgg lalnsgnydl
     1141 syqgnnltit kallnviada ktkvygdadp sltyqvsglk ngdtagavln ggglvrvsge
     1201 nvgnyaiqqg glglvsgnyd layqgnnlti tkallnviad aktkvygdad psltyqvsgl
     1261 kngdsagsil tgglnraage nvgvyginqg dlalnsgnyd lsyqgnnlti tkallnviad
     1321 aktkvygdad psltyqvsgl kngdsagsil tgglnraage nvgvyginqg dlalnsgnyd
     1381 lsyqgnnlti tkallnviad aktkvygdad psltyqvsgl kngdsvgsil tgglnraage
     1441 nvgvyginqg dlalnsgnyd lsyqgnnlti tkallnviad aktkvygdad paltyqvsgl
     1501 kngdtagavl nggslsrvag envgvyginq gglalnsgny dlsyqgnnlt itkallnvia
     1561 dgktkvygda dpsltyqvsg lkngdtagav lnggslsrva genvgvygin qgglalnsgn
     1621 ydlsyqgnnl titkallnvi adaktkvygd adpsltyqvs glkngdtaga vlnggglvrv
     1681 sgenvgnyai qqgglglvsg nydlayqgnn ltitkallnv iadaktkvyg dadpsltyqv
     1741 sglkngdsag siltgglnra agenvgvygi nqgdlalnsg nydlsyqgnn ltitkallnv
     1801 iadaktkvyg dadpsltyqv sglkngdsag siltgglnra agenvgvygi nqgdlalnsg
     1861 nydlsyqgnn ltitkallnv iadaktkvyg dadpsltyqv sglkngdtag avlnggslsr
     1921 vagenvgvyg inqgglglvs gnydlayqgn nltitkalln viadgktkvy gdadpsltyq
     1981 vsglrngdsa gsiltgglnr dagenvgvyg inqgglvlts gnydlayqgn dltitkalln
     2041 vfadakskqv gtadpaltyq vsglkngdsa gqvlagglgr vggeavgqyd ilqgglalts
     2101 gnyqlnyqgn llsilplpvt pgdlgqlaal sdlrelqkgr dpdtpgdavy rtttlenpfl
     2161 enpflrayal gmdvsdpnll pataagpaed asakrvgqft drplraeaes gagcsnqsyl
     2221 adywscfnkp lnf
//
LOCUS       WP_235195700             397 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramoyl-L-alanine amidase [Pseudomonas aeruginosa].
ACCESSION   WP_235195700
VERSION     WP_235195700.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 397)
  AUTHORS   Kuroda,A., Sugimoto,Y., Funahashi,T. and Sekiguchi,J.
  TITLE     Genetic structure, isolation and characterization of a Bacillus
            licheniformis cell wall hydrolase
  JOURNAL   Mol Gen Genet 234 (1), 129-137 (1992)
   PUBMED   1495475
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013670.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01520.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..397
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /EC_number="3.5.1.28"
                     /GO_function="GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=42756
     Region          35..397
                     /region_name="PRK10431"
                     /note="N-acetylmuramoyl-l-alanine amidase II; Provisional"
                     /db_xref="CDD:236692"
ORIGIN      
        1 mkrrrllqsl laglalqpfl aasanvrirq arawnssesw rlvleldgpp ryrtfslqap
       61 erlildlpda qllatlselp ldgpvrairs gqlggggtri vldlrqavrp rsfalepqgg
      121 kghrlvldly pqalaappep mlalarplps tgrdilvvvd aghggkdpga vgskgerekd
      181 valaiarlla rridrekgfk arlvrngdvf vplrkrpeva rrynadmfvs vhadaaprlt
      241 asgasvyals ehgasstmar wmaerengad lignsgnlpl qgrdkvlagv ildmalssti
      301 assldlghsv lgqlsdvtal hqkrveqagf avlkspdips ilvetgfisn hgdcrrlmde
      361 rhrqrlaeai fagvqgyfrq rppagsylaa lsaqppg
//
LOCUS       WP_235195760             436 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Pseudomonas
            aeruginosa].
ACCESSION   WP_235195760
VERSION     WP_235195760.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 436)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..436
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=47766
     Region          <80..436
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mkpatvreas twratatang patwtwggns nwissllrwr crwvrntggk atastpatrr
       61 pttaagrnpw lasrrsargq wsrhawasyl dlgtsltpaw evdvavrhek fsdfgsttng
      121 kfatryqfdp rvalrasvss gfrapslvqe hytglsvgpt ialgllaans paakmlgade
      181 lqpekstsfn lglvlspwen vglnidayqi sirdrivdsa tysgqeaida laaagislpa
      241 sastvsthyl angadtrtrg vditghylva lgeygqvdwe lsanfnrttl rknhrgange
      301 pllnaqqvaw itsstprsqv slggtwsrqd wevslrltry grtsseldyt vgpdawstek
      361 fnhfvndpky itdiaaryrl sadltltaga dnlfdvrpdk lpaqnttygd vlrydtyasq
      421 igfngafyyl raayrf
//
LOCUS       WP_235195761             377 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease [Pseudomonas aeruginosa].
ACCESSION   WP_235195761
VERSION     WP_235195761.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 377)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024110.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12698.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..377
                     /product="ABC transporter permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=41693
     Region          <2..374
                     /region_name="ABC2_perm_RbbA"
                     /note="ribosome-associated ATPase/putative transporter
                     RbbA; NF033858"
                     /db_xref="CDD:468210"
ORIGIN      
        1 mhhpdsgfrr rlvaltrkel rqllrdrsnl aigvilpivl ilifgyglsl dirntplaiv
       61 ledsspaard vaaklagssy fstvqvasir eaedlmrqrt vdgilripvd fsrrleqgdg
      121 riqlllhgad ansaatlgry vngalrvwhe qrvdrlgger vqggvriver mwfnaansst
      181 wylvpglial iitlvgaflt slvvarewer gtleslfvtp vrsaeillak iipyflvgll
      241 glsmclvsar llfrvpiqgs lvlllfssml ylfvtlgigl lisartrnqf lasqvailss
      301 flpalmlsgf lfdlrnvptf irlvgsilpa tyfmelvktl flagdnwhla lknllilagy
      361 avfllkaarl ctrkkld
//
LOCUS       WP_235195847             247 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Pseudomonas aeruginosa].
ACCESSION   WP_235195847
VERSION     WP_235195847.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 247)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..247
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=27475
     Region          3..232
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Site            order(8,10,33,59..60,172,211)
                     /site_type="active"
                     /db_xref="CDD:277317"
     Site            order(8,10,33,59,172,211)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277317"
ORIGIN      
        1 mkirllsdlh hehfdgrrql peveadvvvl agdihshleg lhwargtfad seivyvagnh
       61 efyssemtdl tqamrniara leihflende arigparflg atlwtdfqly gadgyapahe
      121 lalqsmpdfs cidwfggdft peqsialhqa srdwlaeqla rphdgptlvv shhapsalsi
      181 ppqfvgnpls pafasnldel vaqadywlhg hvhdaldyri grarvlanpg gypherggfr
      241 pefvfev
//
LOCUS       WP_235195844            1245 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Pseudomonas aeruginosa].
ACCESSION   WP_235195844
VERSION     WP_235195844.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 1245)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1245
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..1245
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=139651
     Region          36..255
                     /region_name="PBP2_BvgS_HisK_like"
                     /note="The type 2 periplasmic ligand-binding protein
                     domain of the sensor-kinase BvgS and histidine kinase
                     receptors, and related proteins; cd01007"
                     /db_xref="CDD:270228"
     Region          310..432
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cl21578"
                     /db_xref="CDD:473914"
     Site            order(338,342,348,361,363..365,391,396)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(358,363,371,374..375,403,405)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          430..682
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          565..1236
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mqrlqavlll claccwpgla galtltpeer awlaehpsir lgvdtswppf efrdeqgryq
       61 glaagyvsll qerlgvsltp vepktwtqvl eqakdgrldl lpgimatper qeylsftrpy
      121 ldfpiiilar kngpmpkrid elyglkvavv dhyaphelli aqhpdltllp lpsvaaalqa
      181 latgqadafv gdfassvwnl rqlklnglei sgetpyryql amavprgqpi lagivdkvla
      241 dlsaeeierl qapwvgglld rrpawremat yglpivllil vsvaillamn rrlrrevsrr
      301 rqlerelrds eqhyrglves lnaiawemrl eenrftyvsp haerllgypl sewlqpgfwq
      361 rtlhpmdaey aihycmsesq agrdhsfdyr mlaadgrvvw irdlvtpitq grdlllrglm
      421 iditeaklte qamrlseqkf asvfhhcpdm vvlangadgr flavnstfeq qigiaaddai
      481 gktatelgiw alpglgpqvl eklghgnltn levplrrrng stfsallsaq hvaldqtpal
      541 vvvirdithl vetqellris eekfanafha ypdgllisrl edgtlidvne gftrltgyrr
      601 devisrstle lglwvdtedr krlislvrhh tltqgftapv rdrnggirqc emsahrisid
      661 gedcvltiar diterqlmqe klqqaatvfe staegvmitd trqritavnr afseitgyse
      721 qealgrspsl lssgqhdssf ylamwnqler dghwqgeiwn rrktgelype wltisavhnp
      781 qgeithfvgv fadistlkya qarldyqahh dpltglpnrl lfesrlnhal deareesrpg
      841 avlfidldrf khindslghp igdlllkaia erlrdqlrdv dtvarlggde fiillpglhq
      901 esdaehvark llnafiapfq adgheffvsa svgialfpkd gddaptlvkn adaamyraks
      961 rgrsrieyyt reltylater maletelrra lerdelqlyy qpklslesgl lvgaealvrw
     1021 yhplfgeisp erfiplaedc glilplgdwv lehacqqmge wqklhapfgp lsvnlagaql
     1081 gqpqlierle qlleqsglep srlqleites fimnqteeal avlhglkrlg vqlaiddfgt
     1141 gysslsylkr lpldilkidk sfirglpddp hdaaitraii algrsmqltv iaegvetegq
     1201 qsflthegce qiqgfvlspp lpaelfaskf lkprqpigap reapv
//
LOCUS       WP_235195871             335 aa            linear   BCT 02-MAR-2025
DEFINITION  3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal
            domain-containing protein [Serratia plymuthica].
ACCESSION   WP_235195871
VERSION     WP_235195871.1
KEYWORDS    RefSeq.
SOURCE      Serratia plymuthica
  ORGANISM  Serratia plymuthica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 335)
  AUTHORS   Abbadi,A., Brummel,M., Schutt,B.S., Slabaugh,M.B., Schuch,R. and
            Spener,F.
  TITLE     Reaction mechanism of recombinant 3-oxoacyl-(acyl-carrier-protein)
            synthase III from Cuphea wrightii embryo, a fatty acid synthase
            type II condensing enzyme
  JOURNAL   Biochem J 345 Pt 1 (Pt 1), 153-160 (2000)
   PUBMED   10600651
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020130.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08541.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Serratia plymuthica"
                     /db_xref="taxon:82996"
     Protein         1..335
                     /product="3-oxoacyl-[acyl-carrier-protein] synthase III
                     C-terminal domain-containing protein"
                     /calculated_mol_wt=34635
     Region          13..333
                     /region_name="PRK07204"
                     /note="beta-ketoacyl-ACP synthase III"
                     /db_xref="CDD:235964"
ORIGIN      
        1 mtihsgspal lplkviatgv alppnciass aldsllgkpa gyvekrsgiv hrfhatddas
       61 qaelaaaalh dalarhslha hsidllisas aisvqalpct aahilkvagv apgtpgfdin
      121 sscvsfisal qvaagllnag tyrriaivsa dlasrgidwe heesslifgd gaacaiverg
      181 dgasgilasl vetypegsel ceiraggtrr npragmtasd flfhmqgkql frqasalies
      241 ylarllaagg ltlaqiatvv phqashlsle hmrkrlhvsn evlvdiypyh gnqvaasipt
      301 alhaavtqgr fnpgkpvmli gtaaglslag mvllp
//
LOCUS       WP_235195971             288 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Serratia plymuthica].
ACCESSION   WP_235195971
VERSION     WP_235195971.1
KEYWORDS    RefSeq.
SOURCE      Serratia plymuthica
  ORGANISM  Serratia plymuthica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Serratia plymuthica"
                     /db_xref="taxon:82996"
     Protein         1..288
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=33016
     Region          4..285
                     /region_name="RobA_TF"
                     /note="MDR efflux pump AcrAB transcriptional activator
                     RobA; NF012228"
                     /db_xref="CDD:467958"
ORIGIN      
        1 mgtqenhikd llvwiednlt nplsldivsa ksgyskwylq rlfkkqtgls lasyirarrl
       61 ylaafalrft rksildisve yqfdnqqtfs rcfkkhfaes psvyrharkq dfshlvrsls
      121 agqpgdikvd rvtvdkgqyl lrgknyayhl diehldkshl hlrsgikenf ykllggrpsl
      181 iyalthfrpd gqrvrvdysl gveagssvna dpeleplpdi hgdfcrfcys gkpvalndhv
      241 vqiytqilpe lglarregpd ltmfsyslne reelhlelqh lvpvipld
//
LOCUS       WP_235196063             447 aa            linear   BCT 02-MAR-2025
DEFINITION  SIR2 family protein [Serratia plymuthica].
ACCESSION   WP_235196063
VERSION     WP_235196063.1
KEYWORDS    RefSeq.
SOURCE      Serratia plymuthica
  ORGANISM  Serratia plymuthica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024685.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13289.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Serratia plymuthica"
                     /db_xref="taxon:82996"
     Protein         1..447
                     /product="SIR2 family protein"
                     /calculated_mol_wt=50582
     Region          21..257
                     /region_name="SIR2"
                     /note="SIR2 superfamily of proteins includes silent
                     information regulator 2 (Sir2) enzymes which catalyze
                     NAD+-dependent protein/histone deacetylation, where the
                     acetyl group from the lysine epsilon-amino group is
                     transferred to the ADP-ribose moiety of NAD+; cl00195"
                     /db_xref="CDD:444738"
ORIGIN      
        1 mrfhpegpsi pdillercda grvvflcgag vslpsgmptf vdltryviey fdppvdseim
       61 aafspwlhdq ssanvpldqi fnllhleygk devnalvtkr lgasragiev grehalikri
      121 ssnqsgtpqi vttnfdrlfe vnqgknnltr yvppafpdln fgstiegity lhgrlvnena
      181 vshpyvlssa dfgraylseg watnfiklll eryivvlvgy qaedppvryl lqglnhdgqy
      241 drsrlyafdc glpeeieakw rdrgvtaiay sdhpvlwksm eawaeradnp rrwrasviak
      301 sqqdpkvlap yergqvahil rtaqgaklfs eaiprphpew icvmdanirs aklkkryyel
      361 ddndaetfdp qeaygldddr qdisdderkh gvsndnllew rdeddnpsdy hrlaggfeti
      421 pkrlghlmtw fsesldspvm awcvtvn
//
LOCUS       WP_235196160             314 aa            linear   BCT 02-MAR-2025
DEFINITION  metal ABC transporter substrate-binding protein [Serratia
            plymuthica].
ACCESSION   WP_235196160
VERSION     WP_235196160.1
KEYWORDS    RefSeq.
SOURCE      Serratia plymuthica
  ORGANISM  Serratia plymuthica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10100136
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Serratia plymuthica"
                     /db_xref="taxon:82996"
     Protein         1..314
                     /product="metal ABC transporter substrate-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /calculated_mol_wt=34595
     Region          38..312
                     /region_name="PsaA"
                     /note="Metal binding protein PsaA. These proteins have
                     been shown to function as initial receptors in ABC
                     transport of Mn2+ and as surface adhesins in some
                     eubacterial species. They belong to the TroA superfamily
                     of periplasmic metal binding proteins that...; cd01137"
                     /db_xref="CDD:238557"
     Site            order(79,144,210,285)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:238557"
ORIGIN      
        1 mllkqrafpr lplipaaafy rpfallclll vaglagnpal aekklrvvtt ftiiqdiaqn
       61 vagdaavves itkpgaeihd yqptprdivk aqhadlilwn gmnlerwfqr ffenikqvpa
      121 avvtegitpl piregpyngn pnphawmsas naliyienir kalvqhdpan aetynrnaka
      181 yaakisalda plrerlsrip aaqrwlvtse gafsylakdy qlkevylwpi nadeqgspqq
      241 vrrvidavra nripvvfses tisdkparqv aketgakygg vlyvdslstq ggpvptyidl
      301 lnvtvqtiak gfdq
//
LOCUS       WP_235196252             483 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramoyl-L-alanine amidase [Planococcus sp. 107-1].
ACCESSION   WP_235196252
VERSION     WP_235196252.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 483)
  AUTHORS   Kuroda,A., Sugimoto,Y., Funahashi,T. and Sekiguchi,J.
  TITLE     Genetic structure, isolation and characterization of a Bacillus
            licheniformis cell wall hydrolase
  JOURNAL   Mol Gen Genet 234 (1), 129-137 (1992)
   PUBMED   1495475
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013670.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01520.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..483
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /EC_number="3.5.1.28"
                     /GO_function="GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=51870
     Region          29..70
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          89..130
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          197..>267
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          269..458
                     /region_name="AmiC"
                     /note="N-acetylmuramoyl-L-alanine amidase [Cell
                     wall/membrane/envelope biogenesis]; COG0860"
                     /db_xref="CDD:440621"
ORIGIN      
        1 mkkwimmlcf aliasiivpq sqanasanfk digdthraka eitylvdkgf vngvsnthfv
       61 psrqvtrgea aamlgrslgl ngtkqntefs dvgsgnfasg yinemvkrgv isgypdgtfk
      121 pykvlkrgem ailinrafgy ggnsvsaaat nlmnkgiaqg fpdgtfgtea tiiradfavf
      181 larslnesfr vkpgevsfst tmyvntgsdt lnmrsapsns gavisklksg tavgvgkssn
      241 gwshirvngv igyvatsyls ttkpgsvlps papiggsdlt vvidpghggk dpggvsngfq
      301 ekditlnvgl hmksyfdktp isikmtrstn vfielndrak yaskntgdvf islhtnkfng
      361 sakgqetfyy astaatnpkv qqsralsiyl qarmqeawnl qnrgvkvgnl avlrdntvpa
      421 alvemgfidn atdikylqse aerkvmgkal flgtldyfyn yegridvlty yntvgaspsk
      481 klh
//
LOCUS       WP_235196286             145 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Planococcus sp. 107-1].
ACCESSION   WP_235196286
VERSION     WP_235196286.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 145)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 145)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..145
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=16283
     Region          40..145
                     /region_name="Acetyltransf_10"
                     /note="Acetyltransferase (GNAT) domain; pfam13673"
                     /db_xref="CDD:463953"
ORIGIN      
        1 meikkpndil metilslspq aiydgtmgev mptdekikll vqplldkgcf ylaaaegeql
       61 lgwillgtsk dpfteirngf iyelfvlkef rgkgyskslm eaaftyfqqe gytevrlsak
      121 adnpavklye hlgfktrtvs mslkl
//
LOCUS       WP_235196330             256 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4240 domain-containing protein [Planococcus sp. 107-1].
ACCESSION   WP_235196330
VERSION     WP_235196330.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025390.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14024.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..256
                     /product="DUF4240 domain-containing protein"
                     /calculated_mol_wt=29533
     Region          12..76
                     /region_name="WGR"
                     /note="WGR domain, predicted DNA-binding domain in MolR
                     [Transcription]; COG3831"
                     /db_xref="CDD:443043"
     Region          78..201
                     /region_name="DUF4240"
                     /note="Protein of unknown function (DUF4240); pfam14024"
                     /db_xref="CDD:433652"
ORIGIN      
        1 meksfvcits fsnkfwkikv qgnmfivsyg kigtqgsint kefsseehcl reankliqsk
       61 lkkgyreqee nigqarqmte aefwqlidaa hqkgdfmeeq lewlieqlar ksineivhfd
      121 sqfnrvyqks ytsdlwaaay iimggcsdds fdyfrawlvf agkevyeqai adpesimpyl
      181 deeevpefed llscatiafe ektgleqedf lniynslagd egptpeiefd wdeddeatls
      241 rkfpklwaky gedplg
//
LOCUS       WP_235196337             138 aa            linear   BCT 02-MAR-2025
DEFINITION  sporulation protein [Planococcus sp. 107-1].
ACCESSION   WP_235196337
VERSION     WP_235196337.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 138)
  AUTHORS   Han,W.D., Kawamoto,S., Hosoya,Y., Fujita,M., Sadaie,Y., Suzuki,K.,
            Ohashi,Y., Kawamura,F. and Ochi,K.
  TITLE     A novel sporulation-control gene (spo0M) of Bacillus subtilis with
            a sigmaH-regulated promoter
  JOURNAL   Gene 217 (1-2), 31-40 (1998)
   PUBMED   9795118
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07070.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..138
                     /product="sporulation protein"
                     /calculated_mol_wt=15677
     Region          1..>133
                     /region_name="Spo0M"
                     /note="SpoOM protein; cl22933"
                     /db_xref="CDD:473996"
ORIGIN      
        1 mnfkqflssi gigsmqietv verphldege tlngtvyftg gesdqdidfi elnvlkqied
       61 yredsdfdmi ektvakqtle fagsvksket vmqqfeivpd erwildmpks klilrtvvhi
      121 kngvnaqded eityglqe
//
LOCUS       WP_235196367             219 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Planococcus sp. 107-1].
ACCESSION   WP_235196367
VERSION     WP_235196367.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 219)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 219)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..219
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=24403
     Region          7..208
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(13,53,85,190,193)
                     /site_type="active"
                     /db_xref="CDD:239947"
     Site            order(13,190,193)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:239947"
     Site            order(13,53,85)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:239947"
ORIGIN      
        1 mpqaliital gdslsqgvgd tenlggytgr laeeisdwpg vrgtiventa krgrrsdqll
       61 amfpkgvltg piteadyvtm tiggndimki vkrdlfslni eafkdelvly enryrtifks
      121 irainpsvpi iavgiynpfs litdevaefe eiitnyneam meiteedpla cfvpvedlfv
      181 gndnlvyhtd ffhpnskgye lmteriverm gecglsyqe
//
LOCUS       WP_235196378              66 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: zinc-finger domain-containing protein [unclassified
            Planococcus (in: firmicutes)].
ACCESSION   WP_235196378
VERSION     WP_235196378.1
KEYWORDS    RefSeq.
SOURCE      unclassified Planococcus (in: firmicutes)
  ORGANISM  unclassified Planococcus (in: firmicutes)
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10782.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="unclassified Planococcus (in: firmicutes)"
                     /db_xref="taxon:2662419"
     Protein         1..66
                     /product="zinc-finger domain-containing protein"
                     /calculated_mol_wt=7445
     Region          1..58
                     /region_name="zf-C2HCIx2C"
                     /note="Zinc-finger; pfam10782"
                     /db_xref="CDD:402422"
ORIGIN      
        1 mnklsiinei demmetyceg cfvrkqirke qgktaahrfc ishcsvgtql qflgnelnki
       61 gtehks
//
LOCUS       WP_235196407             263 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Planococcus sp. 107-1].
ACCESSION   WP_235196407
VERSION     WP_235196407.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..263
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=28685
     Region          <1..252
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mndaitqsiq tvmwfiggsl lfwlaandil wlaaglflis slllcclspv aykpdsvrtn
       61 wqqishgwkl vakspflkri awmdfletaa gtvwiaaill ifvqealfkg eawwgfings
      121 fflgliagsl lclsfsrvfe eklswfifvg afissiatfl fglsgfpvla lllsflvgva
      181 gqiknipqqt liqsstaesd lptvfttlga iatgtfgias llmgiiadvf girsvfmlsg
      241 flllvvgliv ykgrvllwrp qql
//
LOCUS       WP_235196410             125 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Planococcus sp. 107-1].
ACCESSION   WP_235196410
VERSION     WP_235196410.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024898.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13508.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..125
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=14582
     Region          22..>112
                     /region_name="ArgA"
                     /note="N-acetylglutamate synthase or related
                     acetyltransferase, GNAT family [Amino acid transport and
                     metabolism]; COG1246"
                     /db_xref="CDD:440859"
ORIGIN      
        1 mlvkykklne kiamgllsfm prehdlqtlq nsmdrytedp nwqlylwkqd edlvgvigie
       61 ldeltftvhh aavnpsfrne gigqqmiera qqlhetlamc sthetkdfle kcwanqyplk
      121 eslek
//
LOCUS       WP_235196411             335 aa            linear   BCT 02-MAR-2025
DEFINITION  GHKL domain-containing protein [Streptococcus mitis].
ACCESSION   WP_235196411
VERSION     WP_235196411.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus mitis
  ORGANISM  Streptococcus mitis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus; Streptococcus mitis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025854.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14501.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Streptococcus mitis"
                     /db_xref="taxon:28037"
     Protein         1..335
                     /product="GHKL domain-containing protein"
                     /calculated_mol_wt=38427
     Region          <103..296
                     /region_name="CitA"
                     /note="Sensor histidine kinase DipB regulating
                     citrate/malate metabolism [Signal transduction
                     mechanisms]; COG3290"
                     /db_xref="CDD:442519"
ORIGIN      
        1 mlsevgngiv nssfsllaiv ltvvmmkrws ldldlffsda fkphyrksff iilpltgfri
       61 fssfmtnrns sfyvrfdtti sllifilffs wlfyirhleq vyrdeqtiqr qedenrslqg
      121 mvdklgylyd evrgfrhdfa givasmepai anqdmtevst iyrdvflktn eklrkadyta
      181 fnlhnihdia irntlakami vadnqgihfs letvgvveel alpmleairi lsilttnale
      241 aasesenpqi rvallasdrs vrfiientrk keelnpsils qkgystkgnh sglglatled
      301 mvfhydlnld tqlgemtfrq dlelpfkdek regee
//
LOCUS       WP_235196414             107 aa            linear   BCT 02-MAR-2025
DEFINITION  YpoC family protein [Planococcus sp. 107-1].
ACCESSION   WP_235196414
VERSION     WP_235196414.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF044560.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21747.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..107
                     /product="YpoC family protein"
                     /calculated_mol_wt=12493
ORIGIN      
        1 mklsqkltke svspffeqwa vlaeeisnlh qnrcnqtaqq mmqgldlfka llthceeqif
       61 pmngherihf ieqrpgnyaa frqldelfse mkkkiaakri qmknell
//
LOCUS       WP_235196722             240 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Planococcus sp. 107-1].
ACCESSION   WP_235196722
VERSION     WP_235196722.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 240)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 240)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 240)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 240)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..240
                     /product="ATP-binding protein"
                     /calculated_mol_wt=26599
     Region          <5..239
                     /region_name="KinE"
                     /note="Sporulation sensor histidine kinase E [Cell cycle
                     control, cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG5809"
                     /db_xref="CDD:444511"
ORIGIN      
        1 matsvisrdi syqkeaekli vqseklklag eiaagvahei rnpmtvisgf vqmmqsdady
       61 pykeytklir seldrinlii seflvlakpq assfkkislr kilddtialf gpelnlhgil
      121 fdycwelddf iiegeehrik qvlinlmkna ieasqdpgei slivelrden svavllqdhg
      181 kgiskeelgq ifepfyttke tgtglglivs qkiiqehggt lkiesepgcg tlativlpin
//
LOCUS       WP_235196771             255 aa            linear   BCT 02-MAR-2025
DEFINITION  prolyl oligopeptidase family serine peptidase [Planococcus sp.
            107-1].
ACCESSION   WP_235196771
VERSION     WP_235196771.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012546.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00326.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..255
                     /product="prolyl oligopeptidase family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=28652
     Region          10..247
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 mkvvheiweg ipllnvaaen rfadalptvv ffhghmsake hnlhyayqla nkgmrvilpd
       61 ahlhgdrdeg ldeiqmslrf weivltsiee latihtvihq kklaegeigi ggtsmggitt
      121 lgaltvypwv kaasvmmgaa nyvqlakaqm aqfeskgfkl pitdderkkm ldtlarfdgt
      181 knravfkqrp lffwhgeqdt tvpfeptfnf yhalkedyae vpdrihfmre kesghavsrp
      241 gmlaatawlv ehvak
//
LOCUS       WP_235196757             113 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3899 domain-containing protein [Planococcus sp. 107-1].
ACCESSION   WP_235196757
VERSION     WP_235196757.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024438.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13038.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..113
                     /product="DUF3899 domain-containing protein"
                     /calculated_mol_wt=12554
     Region          32..106
                     /region_name="DUF3899"
                     /note="Domain of unknown function (DUF3899); pfam13038"
                     /db_xref="CDD:432945"
ORIGIN      
        1 mkkmvisvii vqglilltml irsepfslls yinnsfifgg vlvfiglwvf virtgifdif
       61 tlsmrkffkv kttldddemr apseifslss apllilggvt llcmaislvi yel
//
LOCUS       WP_235196845             391 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Planococcus sp. 107-1].
ACCESSION   WP_235196845
VERSION     WP_235196845.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 391)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 391)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..391
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=42642
     Region          5..384
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(28..31,33..34,45,47,73..74,76..77,99,104,107,195,
                     203,205,222,232,234..235,313)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:99738"
     Site            order(74..76,99,142,171,193,195..196,205)
                     /site_type="active"
                     /note="substrate-cofactor binding pocket [active]"
                     /db_xref="CDD:99738"
     Site            order(74..76,99,171,174,193,195..196)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:99738"
     Site            196
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99738"
ORIGIN      
        1 manhletrfi hstgvdketg avnvpiylss tyhqpnidef gpfdysrsgn ptrqkleeti
       61 aklengtrgf afssgmaais safmllsagd hvlvsedvyg gtyrfvtevl nkfnidytfv
      121 nmtdlsemaa airentkviy ietpsnpvmn itdieiaakl akandcltfv dntfmtplyq
      181 npldlgadiv lhsatkflsg hsdiiaglav tkdeelgsrl afiqntfgsi lgaqdsysli
      241 qgiktlgarm kqssasarii adylhshpvv eevyypgfrf hpgnpiherq argagavlsl
      301 rladkaaaki fvdslqipvf avslgaveti lsypatmsha smpkeqreqr gitdgllrls
      361 vgleyaddll edleqalkkv reaspqpvlt k
//
LOCUS       WP_235196873             342 aa            linear   BCT 02-MAR-2025
DEFINITION  LysM peptidoglycan-binding domain-containing protein [Planococcus
            sp. 107-1].
ACCESSION   WP_235196873
VERSION     WP_235196873.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 342)
  AUTHORS   Bateman,A. and Bycroft,M.
  TITLE     The structure of a LysM domain from E. coli membrane-bound lytic
            murein transglycosylase D (MltD)
  JOURNAL   J Mol Biol 299 (4), 1113-1119 (2000)
   PUBMED   10843862
REFERENCE   2  (residues 1 to 342)
  AUTHORS   Joris,B., Englebert,S., Chu,C.P., Kariyama,R., Daneo-Moore,L.,
            Shockman,G.D. and Ghuysen,J.M.
  TITLE     Modular design of the Enterococcus hirae muramidase-2 and
            Streptococcus faecalis autolysin
  JOURNAL   FEMS Microbiol Lett 70 (3), 257-264 (1992)
   PUBMED   1352512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01476.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..342
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=35716
     Region          42..216
                     /region_name="CE4_NodB_like_6s_7s"
                     /note="Catalytic NodB homology domain of rhizobial
                     NodB-like proteins; cd10917"
                     /db_xref="CDD:213022"
     Site            order(47..50,100..105,139,141..142,164,170..171,194,196)
                     /site_type="other"
                     /note="NodB motif"
                     /db_xref="CDD:213022"
     Site            order(49..50,100,104,141..143,164,194,196)
                     /site_type="active"
                     /db_xref="CDD:213022"
     Region          243..285
                     /region_name="LysM"
                     /note="Lysin Motif is a small domain involved in binding
                     peptidoglycan; cd00118"
                     /db_xref="CDD:212030"
     Region          298..340
                     /region_name="LysM"
                     /note="Lysin Motif is a small domain involved in binding
                     peptidoglycan; cd00118"
                     /db_xref="CDD:212030"
ORIGIN      
        1 mkskllkiaa afllilftal sfspsaeaas skfiskatts skvvaltfdd gsdgtniqki
       61 lntlsankik atffltgsga nnhpqaikni avgghqlanh syshpdftkl tasqikaeld
      121 kteaavkkit gkstkplfra pfgasnaavf aavgnagyth tiqwnidtld wkgvystait
      181 nkvvnnivpg sivlmhtgag asgtpgalqg iitklkakgy sfvtvsqllk lpsapppaag
      241 nkytvkagdt lysiakrynv tvnalasank isspyiirvg qvliipgkaa ppvasvkytv
      301 kagdtlysia rkynstvaki aaankipspy likvgqvlti pr
//
LOCUS       WP_235196911             376 aa            linear   BCT 02-MAR-2025
DEFINITION  right-handed parallel beta-helix repeat-containing protein
            [Planococcus sp. 107-1].
ACCESSION   WP_235196911
VERSION     WP_235196911.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024627.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13229.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..376
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /calculated_mol_wt=41203
     Region          56..351
                     /region_name="NosD"
                     /note="Nitrous oxide reductase accessory protein NosD,
                     contains tandem CASH domains [Inorganic ion transport and
                     metabolism]; COG3420"
                     /db_xref="CDD:442646"
ORIGIN      
        1 mdnakwlrwm vvflgiagis yllymnlnrs evamepedek mledknglvg dgiaddtaal
       61 qaainevptg gtlklpdgiy kvsrnpnlka vtgygeshfa leitnpitie mdevtiktet
      121 dgrygifwih dtadvhlkgg sligdkfpvd aeltsniavl lhetqnstie ntytknhsqg
      181 ihlhdadnnl irnvtseyny gsgiinfssn nniidscvvr nssdghlsly gvgenntvvn
      241 cvvtedrpdh tieqgitves eknsriennt vsgfyygidi kngaesniit snnvfdneyn
      301 iairpgdgge nlltpshdiv itnnfatnpr gnshfgifvd igeghvitgn tvnkgnliit
      361 dpkmfakyek qnsyve
//
LOCUS       WP_235196940             367 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-binding dehydrogenase [Planococcus sp. 107-1].
ACCESSION   WP_235196940
VERSION     WP_235196940.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00107.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..367
                     /product="zinc-binding dehydrogenase"
                     /calculated_mol_wt=39426
     Region          19..366
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
     Site            order(58..60,63,174,178,199..202,204..205,223..224,228,
                     266..267,288..289,313..315)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176227"
ORIGIN      
        1 maekesavns lktnvpekmr avvirehggp evlqleelst prpkagevli qvkavglnhl
       61 dvfareglkg pgvpkltlph isgvdiagrv aaygsgqdac dhrfsigdrv lvnpaygcgn
      121 cracrageps mcrdyqiige hrwgglaefv vvpekniiai pdqisdetaa aipavyttaw
      181 rgvvtvgkvk tsdvvlivga sgglgsaqld iavaagatvi aiagseekrq rclkigakaa
      241 fdshgdwqte vlewtdgrgv dlvldsvgkp tfrkslncld fngrmvlsga tagdfpeisi
      301 reiyqwhrqi lgapmgnwed flqvtdsiwq gklhpqvhav ysleeiaaae eeldqrkhfg
      361 kiiikps
//
LOCUS       WP_235196674              99 aa            linear   BCT 02-MAR-2025
DEFINITION  YkyA family protein [Planococcus sp. 107-1].
ACCESSION   WP_235196674
VERSION     WP_235196674.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 99)
  AUTHORS   Wei,W., Cao,Z., Zhu,Y.L., Wang,X., Ding,G., Xu,H., Jia,P., Qu,D.,
            Danchin,A. and Li,Y.
  TITLE     Conserved genes in a path from commensalism to pathogenicity:
            comparative phylogenetic profiles of Staphylococcus epidermidis
            RP62A and ATCC12228
  JOURNAL   BMC Genomics 7, 112 (2006)
   PUBMED   16684363
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021854.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10368.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..99
                     /product="YkyA family protein"
                     /calculated_mol_wt=11170
     Region          23..>96
                     /region_name="YkyA"
                     /note="Putative cell-wall binding lipoprotein; pfam10368"
                     /db_xref="CDD:431235"
ORIGIN      
        1 mkkvfmatif ssalllsacs gqnaseeldn vlqetfsaek eyrdtqseme klekdeqqlf
       61 esimgltqeq qeevsgqaee amesadqrle llktekrid
//
LOCUS       WP_235196963             272 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein
            [Planococcus sp. 107-1].
ACCESSION   WP_235196963
VERSION     WP_235196963.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 272)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..272
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=29297
     Region          41..259
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mkkrslislv lmgtlslala acgeeetagg ssgdsggeke klrlvtdgay apmeyldgge
       61 vtgfgvdfae avveeagyea dievigwepi fveiegktad lavssitind erketydfsv
      121 pyylstnmim vpedsdvesg edlkgkkiav lngstgqeaa etiagenstd vlkfadnnla
      181 iqellaggad aviadntive yytqmnpeqk lkvvpdedfa defygilfpk gselkadfde
      241 aikaiidngt yteiyqewfg tepdletlka qq
//
LOCUS       WP_235196971             201 aa            linear   BCT 02-MAR-2025
DEFINITION  competence protein ComK [Planococcus sp. 107-1].
ACCESSION   WP_235196971
VERSION     WP_235196971.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 201)
  AUTHORS   Nanamiya,H., Shiomi,E., Ogura,M., Tanaka,T., Asai,K. and
            Kawamura,F.
  TITLE     Involvement of ClpX protein in the post-transcriptional regulation
            of a competence specific transcription factor, ComK protein, of
            Bacillus subtilis
  JOURNAL   J Biochem 133 (3), 295-302 (2003)
   PUBMED   12761164
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018087.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06338.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..201
                     /product="competence protein ComK"
                     /GO_process="GO:0030420 - establishment of competence for
                     transformation [Evidence IEA]"
                     /calculated_mol_wt=23003
     Region          5..154
                     /region_name="ComK"
                     /note="ComK protein; cl11560"
                     /db_xref="CDD:472221"
ORIGIN      
        1 mrmnknyait pdtlmivphy nngdlhslvc gkdgyleadk spyqlidtnf lyrgtslrga
       61 megahdilgk ismypiildy ekeiillpck sparkdciwf slshihatdn lqdkhtlvtl
      121 sngstididi skeifdkkmr kayelqfkma vrrkleelde lasetpyhlf kmvngvnyee
      181 rtmtnlsfta kldykktaak k
//
LOCUS       WP_235195781            1159 aa            linear   BCT 02-MAR-2025
DEFINITION  PAS domain-containing hybrid sensor histidine kinase/response
            regulator [Pseudomonas aeruginosa].
ACCESSION   WP_235195781
VERSION     WP_235195781.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 1159)
  AUTHORS   Stuffle,E.C., Johnson,M.S. and Watts,K.J.
  TITLE     PAS domains in bacterial signal transduction
  JOURNAL   Curr Opin Microbiol 61, 8-15 (2021)
   PUBMED   33647528
REFERENCE   2  (residues 1 to 1159)
  AUTHORS   Gao,R., Bouillet,S. and Stock,A.M.
  TITLE     Structural Basis of Response Regulator Function
  JOURNAL   Annu Rev Microbiol 73, 175-197 (2019)
   PUBMED   31100988
REFERENCE   3  (residues 1 to 1159)
  AUTHORS   Ortet,P., Whitworth,D.E., Santaella,C., Achouak,W. and Barakat,M.
  TITLE     P2CS: updates of the prokaryotic two-component systems database
  JOURNAL   Nucleic Acids Res 43 (Database issue), D536-D541 (2015)
   PUBMED   25324303
REFERENCE   4  (residues 1 to 1159)
  AUTHORS   Attwood,P.V.
  TITLE     Histidine kinases from bacteria to humans
  JOURNAL   Biochem Soc Trans 41 (4), 1023-1028 (2013)
   PUBMED   23863173
REFERENCE   5  (residues 1 to 1159)
  AUTHORS   Galperin,M.Y.
  TITLE     Diversity of structure and function of response regulator output
            domains
  JOURNAL   Curr Opin Microbiol 13 (2), 150-159 (2010)
   PUBMED   20226724
REFERENCE   6  (residues 1 to 1159)
  AUTHORS   Galperin,M.Y.
  TITLE     Structural classification of bacterial response regulators:
            diversity of output domains and domain combinations
  JOURNAL   J Bacteriol 188 (12), 4169-4182 (2006)
   PUBMED   16740923
REFERENCE   7  (residues 1 to 1159)
  AUTHORS   Hefti,M.H., Francoijs,K.J., de Vries,S.C., Dixon,R. and Vervoort,J.
  TITLE     The PAS fold. A redefinition of the PAS domain based upon
            structural prediction
  JOURNAL   Eur J Biochem 271 (6), 1198-1208 (2004)
   PUBMED   15009198
REFERENCE   8  (residues 1 to 1159)
  AUTHORS   Dutta,R. and Inouye,M.
  TITLE     GHKL, an emergent ATPase/kinase superfamily
  JOURNAL   Trends Biochem Sci 25 (1), 24-28 (2000)
   PUBMED   10637609
REFERENCE   9  (residues 1 to 1159)
  AUTHORS   Stock,A.M., Robinson,V.L. and Goudreau,P.N.
  TITLE     Two-component signal transduction
  JOURNAL   Annu Rev Biochem 69, 183-215 (2000)
   PUBMED   10966457
REFERENCE   10 (residues 1 to 1159)
  AUTHORS   Stock,J.
  TITLE     Signal transduction: Gyrating protein kinases
  JOURNAL   Curr Biol 9 (10), R364-R367 (1999)
   PUBMED   10339418
REFERENCE   11 (residues 1 to 1159)
  AUTHORS   Ponting,C.P. and Aravind,L.
  TITLE     PAS: a multifunctional domain family comes to light
  JOURNAL   Curr Biol 7 (11), R674-R677 (1997)
   PUBMED   9382818
REFERENCE   12 (residues 1 to 1159)
  AUTHORS   Alex,L.A. and Simon,M.I.
  TITLE     Protein histidine kinases and signal transduction in prokaryotes
            and eukaryotes
  JOURNAL   Trends Genet 10 (4), 133-138 (1994)
   PUBMED   8029829
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11586208
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1159
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..1159
                     /product="PAS domain-containing hybrid sensor histidine
                     kinase/response regulator"
                     /EC_number="2.7.13.3"
                     /GO_function="GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA]"
                     /GO_function="GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=127366
     Region          7..511
                     /region_name="SLC5sbd"
                     /note="Solute carrier 5 family, sodium/glucose
                     transporters and related proteins; solute-binding domain;
                     cd10322"
                     /db_xref="CDD:271357"
     Site            order(47,50,339,342..343)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271357"
     Region          644..758
                     /region_name="PAS_7"
                     /note="PAS fold; pfam12860"
                     /db_xref="CDD:432837"
     Region          <767..1017
                     /region_name="BaeS"
                     /note="Signal transduction histidine kinase [Signal
                     transduction mechanisms]; COG0642"
                     /db_xref="CDD:440407"
     Region          1035..1157
                     /region_name="CheY"
                     /note="CheY-like REC (receiver) domain, includes
                     chemotaxis protein CheY and sporulation regulator Spo0F
                     [Signal transduction mechanisms]; COG0784"
                     /db_xref="CDD:440547"
ORIGIN      
        1 mslsigliav valvymailf aiafygdrrr tplsprlraw vyslslavyc tswtffgavg
       61 qatdqlwsfl piylgpvllm lfapwvlqkm imiskqenit siadfiaary gksqalavvv
      121 alicmvgvlp yialqlkgiv lgvnlligsg adstgtraqd talivslvla lftivfgtrs
      181 ldvtehhrgm vlaiafeslv kltaflavgi fvtfglydgf adlfsqaraa pqladyweet
      241 vhwpamllqt gvamtaimcl prqfhvtvve nieprdlnla rwvfpiylvl aalfvvpial
      301 agqlhlpagv mpdsfvislp laeahpalal lafiggasaa tgmvivasva lstmvsndml
      361 lpwllrrrek dterpfeafr hwlltvrrvs iavilllayv ayrllgssas latigqiafa
      421 aiaqlgpami galywkqanr rgvfaglaag sllwaytlvl pvvakglgwp leripgltwl
      481 asnpfglpie pltqgvlisl vgnfalfglv svlsrtrvse hwqasrfigq eisqrqnsrf
      541 mlavqvedll mlaarfvgee rarqsfirfa yrqgkgftpn qtannewiah terllagvlg
      601 assaravvka aiegremqve dvvriadeas evlqfnrall qgaienitqg isvvdqslrl
      661 vawnhrylel feypdgliyv grpiadiiry nadrglcgpg dpdmhvakrl ywmrqgtpht
      721 serlfpngrv ielignpmpg ggfvmsftdi tayreaeqgl kganesleqr vqertqelsq
      781 lnqelseaks naeaanqskt rflaavshdl mqplnaarlf saalahqdal pgevrdlvqh
      841 ldsslrsaed litdlldisr lesgrvsaer npfplnnlyd algvefkala qeqglhfrlr
      901 gsqlrvdsdi kllrrilqnf ltnafryakg hvllgvrred gylrlevwdq gpgippdkqk
      961 vifeefkrld shqtraekgl glglaiadrl ckvlghplev rswpgkgsvf svrvplarqa
     1021 ppalsnghka epaqalngaq vlcvdnedsi lagmnsllsr wgcqvwtars reecatllds
     1081 emrpqlalid yhlddgetgt qlmawlrtrl gepvpgvvis adarpelvae ihaagldyls
     1141 kpvkpaalra llsrhlslr
//
LOCUS       WP_235196991             402 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Planococcus sp. 107-1].
ACCESSION   WP_235196991
VERSION     WP_235196991.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..402
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=45466
     Region          15..396
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mkllylgnai kneecdkfag psiagnkmql glikalhkkl gkdltvltey piaayptekk
       61 vfinnksiei apnlrskkvp finiflikqi tkilfatfmi lnwclknrke ekiivcfnsy
      121 pdiatpilwi skiiniqtvc iladlpvnkv vkhkglkfia rnyeeriakk nirkfdllav
      181 lnknaiiefa pnsdyvvldg gfdissvptn rcggqwleke dektkilrvl ysgslteyng
      241 irnlieaakl venkkfslei ygsgelskfv eaeskkneni nfygkvssee ivklqqnasl
      301 lvspllpeds vakvafpski veyllsgtpv vstkvsglne dylqnlytfn dtnpqtfant
      361 ideilieeke vliskavkar efiikeknwd kqvkkvflkl nh
//
LOCUS       WP_235196999             153 aa            linear   BCT 02-MAR-2025
DEFINITION  DegT/DnrJ/EryC1/StrS family aminotransferase [Planococcus sp.
            107-1].
ACCESSION   WP_235196999
VERSION     WP_235196999.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Ahlert,J., Distler,J., Mansouri,K. and Piepersberg,W.
  TITLE     Identification of stsC, the gene encoding the
            L-glutamine:scyllo-inosose aminotransferase from
            streptomycin-producing Streptomycetes
  JOURNAL   Arch Microbiol 168 (2), 102-113 (1997)
   PUBMED   9238101
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013227.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01041.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..153
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /calculated_mol_wt=17812
     Region          <39..150
                     /region_name="WecE"
                     /note="dTDP-4-amino-4,6-dideoxygalactose transaminase
                     [Cell wall/membrane/envelope biogenesis]; COG0399"
                     /db_xref="CDD:440168"
ORIGIN      
        1 mkdkalsqfs eaekninkdf ypyqidrlsf eiinsideee lirkrksnyl ilssglkevs
       61 ylqhtflked dntcpmffpv liekelrnav rgklaeqgiy cpihwpippq igtdvisstk
      121 eiyeqvlsip cdqrydqedi kkvltvfnsi hlr
//
LOCUS       WP_235197030             682 aa            linear   BCT 02-MAR-2025
DEFINITION  S-layer homology domain-containing protein [Planococcus sp. 107-1].
ACCESSION   WP_235197030
VERSION     WP_235197030.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 682)
  AUTHORS   Mesnage,S., Fontaine,T., Mignot,T., Delepierre,M., Mock,M. and
            Fouet,A.
  TITLE     Bacterial SLH domain proteins are non-covalently anchored to the
            cell surface via a conserved mechanism involving wall
            polysaccharide pyruvylation
  JOURNAL   EMBO J 19 (17), 4473-4484 (2000)
   PUBMED   10970841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012613.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00395.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..682
                     /product="S-layer homology domain-containing protein"
                     /calculated_mol_wt=74318
     Region          119..465
                     /region_name="COG2374"
                     /note="Predicted extracellular nuclease [General function
                     prediction only]"
                     /db_xref="CDD:441941"
     Region          499..539
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          558..599
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          625..666
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
ORIGIN      
        1 mktgtaelpa pivigkdvfp ptknidtdgl tqfnpdvdgi dfweslelmr vgvadaqivg
       61 pqsygevivv sknatnnafh kqggiliaed dynperiafd idnekfiaka gdsfdgtpvg
      121 vlgfgfgnyk iwavesdlpt lvdggtapeq twikkqndkl tvasynvenf sadpshtsne
      181 kaeriaesfv edlnspdiiv mvevqdndgp kttgnsdata tyerlisgie aaggptykwt
      241 diapeynqdg gepggnirvg ylynpdrvkl segtkgsate tnswvngela lnpgrvqpip
      301 mpgtrkplaa qfefqgeqvv vigahlnskg gdqplfgknq pptlgsvper ielakaingf
      361 ikeglaqnpn lnvvvagdmn dfeftpalaa lkgdilankv edvpvedrys yyyqgnsqvl
      421 dhvlvtknlk drteidmihi nsmfmeehgr asdhdpvlvq mdlkkpvtip enpsypnppv
      481 epekpvepek pevpepvtfd diqshwakkq iealaskgiv fgksteafep esklsrsefa
      541 vllaralelp lkeyegtfkd vrtskawayq gieaaaragi vfgktdgtyd pdaeitreei
      601 aammiraiey qdasllegid ashkfadakk vgkhaveava kayglgiisg rvhnkfdpka
      661 ditraetivi lyrgldkmdl ld
//
LOCUS       WP_235197177             127 aa            linear   BCT 02-MAR-2025
DEFINITION  alanine--tRNA ligase-related protein [Planococcus sp. 107-1].
ACCESSION   WP_235197177
VERSION     WP_235197177.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013570.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01411.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..127
                     /product="alanine--tRNA ligase-related protein"
                     /GO_function="GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /GO_function="GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /calculated_mol_wt=14399
     Region          1..>124
                     /region_name="AlaX"
                     /note="Ser-tRNA(Ala) deacylase AlaX (editing enzyme)
                     [Translation, ribosomal structure and biogenesis];
                     COG2872"
                     /db_xref="CDD:442119"
ORIGIN      
        1 mteklyyqdp emkkaivrvn rngqnsvgfy avldqtcfyp egggqpadtg rigevqvtnv
       61 qtldgeilhy tespvppgqy eaeidwkrrf dhmqqhagqh vlsaifddfh qmkttsfhlg
      121 eercpli
//
LOCUS       WP_235197048             727 aa            linear   BCT 02-MAR-2025
DEFINITION  5'-nucleotidase C-terminal domain-containing protein [Planococcus
            sp. 107-1].
ACCESSION   WP_235197048
VERSION     WP_235197048.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 727)
  AUTHORS   Knofel,T. and Strater,N.
  TITLE     X-ray structure of the Escherichia coli periplasmic 5'-nucleotidase
            containing a dimetal catalytic site
  JOURNAL   Nat Struct Biol 6 (5), 448-453 (1999)
   PUBMED   10331872
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014871.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02872.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..727
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /GO_process="GO:0009166 - nucleotide catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=77517
     Region          94..130
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          154..193
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          208..706
                     /region_name="UshA"
                     /note="2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or
                     3'-nucleotidase, 5'-nucleotidase family [Nucleotide
                     transport and metabolism, Defense mechanisms]; COG0737"
                     /db_xref="CDD:440500"
ORIGIN      
        1 mtnvlknkkf vasavaiaav atavspasaa emkftdvpdr yteavqflfd lgivkgetat
       61 tygthhsvkr qdaavmiasa lgytsagkya dsgftdvpls akwavdalae kgfidgksak
      121 rfgasdpltr netakilata agleinddlk ktqftdvner fakyvdalvk nklavgktat
      181 qfgsnaavtr geaalflhrt aqflleddtf slsvmhvndt hahlddaakl vtatkefrke
      241 npnslllhag dvfsgtlyfn eykgeadvkl mnlmnfdamt fgnhefdlgs speghkalqe
      301 fvkaanfpfv sanvdfskdp lfdglfqtki ssapekaniy tgivkevnge kvgifglttk
      361 etediaspel vsfdedyike aqdmvdefek mgvnkvialt higyddnpti dndlelakgv
      421 qgidvivggh shtklaapvv agtkeeptvi vqtgqygenl gtldvkfdde gvvmshdgel
      481 ievgklaede aalkvltpyk egvkkvsete tkatataale tprtgenpaa psvrknetal
      541 gniitdgmlt kaktynkdvv mafqngggir agidagpitv geiitvlpfg ntlatmkvtg
      601 aelkdafets vgqypkengg flhvsgaevk fdsskpager ivsislknad gtltaiadat
      661 tytvatnaft akggdgfdgf akayeegrvt dlglsdwenl reelerigsv tpktegritd
      721 vnpaaan
//
LOCUS       WP_235197199             196 aa            linear   BCT 02-MAR-2025
DEFINITION  pilus assembly protein TadG-related protein [Planococcus sp.
            107-1].
ACCESSION   WP_235197199
VERSION     WP_235197199.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 196)
  AUTHORS   Tomich,M., Planet,P.J. and Figurski,D.H.
  TITLE     The tad locus: postcards from the widespread colonization island
  JOURNAL   Nat Rev Microbiol 5 (5), 363-375 (2007)
   PUBMED   17435791
REFERENCE   2  (residues 1 to 196)
  AUTHORS   Kachlany,S.C., Planet,P.J., Bhattacharjee,M.K., Kollia,E.,
            DeSalle,R., Fine,D.H. and Figurski,D.H.
  TITLE     Nonspecific adherence by Actinobacillus actinomycetemcomitans
            requires genes widespread in bacteria and archaea
  JOURNAL   J Bacteriol 182 (21), 6169-6176 (2000)
   PUBMED   11029439
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13400.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..196
                     /product="pilus assembly protein TadG-related protein"
                     /calculated_mol_wt=21477
ORIGIN      
        1 mkkfkfylnn eqgnialfvi gilsvmiilf vlilnlagal ivkeqaists qqaalaataa
       61 lyedlpefis dyemklkeml aeeaeeggea eppeeaapae eedsiaelie kevdnlsgem
      121 adyslneiqn eaidrvlase mdkglgggll kkmmndemey rwinsmkesa rntilangge
      181 lagaqmtvfe krtgcr
//
LOCUS       WP_235197201             469 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: VWA domain-containing protein [unclassified
            Planococcus (in: firmicutes)].
ACCESSION   WP_235197201
VERSION     WP_235197201.1
KEYWORDS    RefSeq.
SOURCE      unclassified Planococcus (in: firmicutes)
  ORGANISM  unclassified Planococcus (in: firmicutes)
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024909.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13519.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="unclassified Planococcus (in: firmicutes)"
                     /db_xref="taxon:2662419"
     Protein         1..469
                     /product="VWA domain-containing protein"
                     /calculated_mol_wt=51497
     Region          153..351
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(173,258,288)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
ORIGIN      
        1 mklgkvlvas llvlglaacq qdepeepkaa eteeqtkaea dkdtaaeste kaeeepglee
       61 aiseedlial petdqdlisq pvgkighldl ssgdeeeiep affeafgevp plkedaseee
      121 mdlyfnylys lvaydfqnpq dvlnqlefal sgtpeaderf afkenynvev ildasgsman
      181 yvggktrmel akesirnfma evpeeanvsl riyghegtgs eedkaascaa idevyergty
      241 dkakfeqaln tfepagwtpv agalesaqas fegldsktnt nliymvsdgi etcegdpvav
      301 akslaasnva piinvigfna daeaqqqlke vakaaegifs nvadgkqlte qfnqseevlk
      361 nwkswkqnse ldvlkasnds wlaiqqfenn wsasalkqel alnrglrylr eagyinwdqk
      421 svlekkvydi sdvansakgp lvselnevke kgldemrkqi sdkypdeae
//
LOCUS       WP_235197203             311 aa            linear   BCT 02-MAR-2025
DEFINITION  type II secretion system F family protein [Planococcus sp. 107-1].
ACCESSION   WP_235197203
VERSION     WP_235197203.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 311)
  AUTHORS   Peabody,C.R., Chung,Y.J., Yen,M.R., Vidal-Ingigliardi,D.,
            Pugsley,A.P. and Saier,M.H.
  TITLE     Type II protein secretion and its relationship to bacterial type IV
            pili and archaeal flagella
  JOURNAL   Microbiology (Reading) 149 (Pt 11), 3051-3072 (2003)
   PUBMED   14600218
REFERENCE   2  (residues 1 to 311)
  AUTHORS   Py,B., Loiseau,L. and Barras,F.
  TITLE     An inner membrane platform in the type II secretion machinery of
            Gram-negative bacteria
  JOURNAL   EMBO Rep 2 (3), 244-248 (2001)
   PUBMED   11266368
REFERENCE   3  (residues 1 to 311)
  AUTHORS   Stathopoulos,C., Hendrixson,D.R., Thanassi,D.G., Hultgren,S.J., St
            Geme,J.W. 3rd and Curtiss,R. 3rd.
  TITLE     Secretion of virulence determinants by the general secretory
            pathway in gram-negative pathogens: an evolving story
  JOURNAL   Microbes Infect 2 (9), 1061-1072 (2000)
   PUBMED   10967286
REFERENCE   4  (residues 1 to 311)
  AUTHORS   Salmond,G.P. and Reeves,P.J.
  TITLE     Membrane traffic wardens and protein secretion in gram-negative
            bacteria
  JOURNAL   Trends Biochem Sci 18 (1), 7-12 (1993)
   PUBMED   8438237
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11449670
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..311
                     /product="type II secretion system F family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /calculated_mol_wt=35607
     Region          116..301
                     /region_name="TadC"
                     /note="Flp pilus assembly protein TadC [Extracellular
                     structures]; COG2064"
                     /db_xref="CDD:441667"
ORIGIN      
        1 mdaliiftii vfwfmvilgi rnwsvyvnek rgvlvhvset tnvdgfdkkk kkqkqkanlf
       61 srlsgyadef selgqrinff sesievadwl kksgnpyelt varfqglkil lfiigffaam
      121 lafiiglpfs kyglvflpli gyfipiylvr sqakkrqekl rmdlpdfldt istsiqagvs
      181 ldqalrevir ffdgplreef mrfnqeidlg vqretayrnl lerndneefq qliksllqgm
      241 klgvpiattf kiqaedmrql rqervkelaa kaspkvtlvt tfvvapvsim miaglmllnm
      301 iygensifni l
//
LOCUS       WP_235197281             130 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2512 family protein [Planococcus sp. 107-1].
ACCESSION   WP_235197281
VERSION     WP_235197281.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022171.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10710.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..130
                     /product="DUF2512 family protein"
                     /calculated_mol_wt=14741
     Region          1..124
                     /region_name="DUF2512"
                     /note="Protein of unknown function (DUF2512); pfam10710"
                     /db_xref="CDD:371204"
ORIGIN      
        1 mryieailmk famvfavlfv ilglvgieli diflislvit ivdfigdlvi yprtsnkiat
       61 ggdlvlvfll vwllgmvwie npdsslvmpa iysaiiiaia ewffhiyltk rvwerketsh
      121 ttthdeprqs
//
LOCUS       WP_235197331             238 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6904 family protein [Planococcus sp. 107-1].
ACCESSION   WP_235197331
VERSION     WP_235197331.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046127.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21845.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..238
                     /product="DUF6904 family protein"
                     /calculated_mol_wt=27501
ORIGIN      
        1 mltlmntpnh tgvkisgdyf dldelnkaiy hvigdenkyy dyagsrmril giayeirhaa
       61 qgdrnvesvf nglhdhmkkq hgfiapdkni yfsteilwpe llyaalalke fsalhrkqak
      121 ltdwdihlpv iqrfqalild clhgqvpeee yqailktfqe appledyaiq yvdflnlkyi
      181 empkvqkekt lpliamkiaa qdkdyaafrn qvlaasnpek rpihevrlqa eypeeivw
//
LOCUS       WP_235197365             233 aa            linear   BCT 02-MAR-2025
DEFINITION  P-II family nitrogen regulator [Planococcus sp. 107-1].
ACCESSION   WP_235197365
VERSION     WP_235197365.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 233)
  AUTHORS   Nichols,C.E., Sainsbury,S., Berrow,N.S., Alderton,D.,
            Saunders,N.J., Stammers,D.K. and Owens,R.J.
  TITLE     Structure of the PII signal transduction protein of Neisseria
            meningitidis at 1.85 A resolution
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 62 (Pt 6), 494-497
            (2006)
   PUBMED   16754965
REFERENCE   2  (residues 1 to 233)
  AUTHORS   Cheah,E., Carr,P.D., Suffolk,P.M., Vasudevan,S.G., Dixon,N.E. and
            Ollis,D.L.
  TITLE     Structure of the Escherichia coli signal transducing protein PII
  JOURNAL   Structure 2 (10), 981-990 (1994)
   PUBMED   7866749
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012753.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00543.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..233
                     /product="P-II family nitrogen regulator"
                     /GO_function="GO:0030234 - enzyme regulator activity
                     [Evidence IEA]"
                     /GO_process="GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA]"
                     /calculated_mol_wt=24548
ORIGIN      
        1 mnlnhrlmia vvkrghsrev iaaakkagad gatilygegi grnekptflg lpathekdvi
       61 fiaidgtlvd pvadavtqsg klgkpghglg ftvhlsqllg vphlsarpnd gkkkkggqsm
      121 raaheqfnli vtivnsgdss kvvkaaakag aeggtiltgr gtgvneqqkf mnftidpekd
      181 vvltlipedy teaviesiqn aidlyapgkg iaflidvekv fgvnhssfds fnq
//
LOCUS       WP_235197415             128 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Planococcus sp. 107-1].
ACCESSION   WP_235197415
VERSION     WP_235197415.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..128
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=14498
     Region          2..128
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(2..4,18,34..36)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133389"
ORIGIN      
        1 mkigeiaqls gvstrtidyy tnrgllsver seknyrlypd salqtlerih qlkkqrlsia
       61 eikelldssr lpetevlaed vyeefdclqk kiirleeqmk dapahvkvqi skalesklva
      121 iasllall
//
LOCUS       WP_235197445             358 aa            linear   BCT 02-MAR-2025
DEFINITION  metal ABC transporter solute-binding protein, Zn/Mn family
            [Planococcus sp. 107-1].
ACCESSION   WP_235197445
VERSION     WP_235197445.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 358)
  AUTHORS   Ilari,A., Alaleona,F., Tria,G., Petrarca,P., Battistoni,A.,
            Zamparelli,C., Verzili,D., Falconi,M. and Chiancone,E.
  TITLE     The Salmonella enterica ZinT structure, zinc affinity and
            interaction with the high-affinity uptake protein ZnuA provide
            insight into the management of periplasmic zinc
  JOURNAL   Biochim Biophys Acta 1840 (1), 535-544 (2014)
   PUBMED   24128931
REFERENCE   2  (residues 1 to 358)
  AUTHORS   Gabbianelli,R., Scotti,R., Ammendola,S., Petrarca,P., Nicolini,L.
            and Battistoni,A.
  TITLE     Role of ZnuABC and ZinT in Escherichia coli O157:H7 zinc
            acquisition and interaction with epithelial cells
  JOURNAL   BMC Microbiol 11, 36 (2011)
   PUBMED   21338480
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 358)
  AUTHORS   Lee,Y.H., Deka,R.K., Norgard,M.V., Radolf,J.D. and Hasemann,C.A.
  TITLE     Treponema pallidum TroA is a periplasmic zinc-binding protein with
            a helical backbone
  JOURNAL   Nat Struct Biol 6 (7), 628-633 (1999)
   PUBMED   10404217
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013465.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01297.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..358
                     /product="metal ABC transporter solute-binding protein,
                     Zn/Mn family"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=39518
     Region          37..358
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(104..105,108,207)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238499"
ORIGIN      
        1 mkkllflvll lalflgacgs tndsstdaan gadtakddkl svyttvyplt yfteqiggdl
       61 vevesiypag snehtyeptq qdmislaead lvfyigmgle gfidkaqttl knenvefvat
      121 aatipeeelg eghshdhege aedghthehe aadehnhehg deehnhdhea deehshdhgh
      181 dhshgsvdph vwispvlsqq laesvknelv kqdsgnakty eanyealiee lkeldqsfqe
      241 tadaaanktf fvshaafgyi adtygleqva vaglnsqdep sqkeltqivd qakeldiryv
      301 afeqnvsskl teviqkeiga eavqlhnlgv lteedvadke tyftlmeenr ktlekiln
//
LOCUS       WP_235197466             333 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA/RNA non-specific endonuclease [Planococcus sp. 107-1].
ACCESSION   WP_235197466
VERSION     WP_235197466.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13930.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..333
                     /product="DNA/RNA non-specific endonuclease"
                     /calculated_mol_wt=35713
     Region          123..241
                     /region_name="NUC"
                     /note="DNA/RNA non-specific endonuclease; prokaryotic and
                     eukaryotic double- and single-stranded DNA and RNA
                     endonucleases also present in phosphodiesterases. They
                     exists as monomers and homodimers; cl00089"
                     /db_xref="CDD:469610"
ORIGIN      
        1 mkkkmnylil llmavflvgc tdiedaasie kvetdveevs tveeekssee vipevaeepa
       61 aeeepatevv eepaveetpa epandlfagy tlievdggdl sghreanvvv digfgdreyw
      121 aftnehgqlv rvvaseiilq ddntepvtsa gryypdeakv pgvesaalde ghviadslgg
      181 vsnaynitpq estlnrygdq aymedvirka ggasdfeavi typdtetqip ssyqytytvn
      241 gnkvvdnydn vnpdevnksl gltggeaaes aeaetesapa patggdvstv dtdgngqvti
      301 keakaagfgm pimsdhwlyp ymrdndndgm vge
//
LOCUS       WP_235197468             248 aa            linear   BCT 02-MAR-2025
DEFINITION  5-methylcytosine restriction system specificity protein McrC
            [Planococcus sp. 107-1].
ACCESSION   WP_235197468
VERSION     WP_235197468.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 248)
  AUTHORS   Zheng,L. and Braymer,H.D.
  TITLE     Overproduction and purification of McrC protein from Escherichia
            coli K-12
  JOURNAL   J Bacteriol 173 (12), 3918-3920 (1991)
   PUBMED   2050643
  REMARK    Erratum:[J Bacteriol 1991 Sep;173(18):5933]
REFERENCE   2  (residues 1 to 248)
  AUTHORS   Dila,D., Sutherland,E., Moran,L., Slatko,B. and Raleigh,E.A.
  TITLE     Genetic and sequence organization of the mcrBC locus of Escherichia
            coli K-12
  JOURNAL   J Bacteriol 172 (9), 4888-4900 (1990)
   PUBMED   2203735
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021622.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10117.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..248
                     /product="5-methylcytosine restriction system specificity
                     protein McrC"
                     /calculated_mol_wt=28516
     Region          1..>239
                     /region_name="McrBC"
                     /note="McrBC 5-methylcytosine restriction system
                     component; cl01737"
                     /db_xref="CDD:470319"
ORIGIN      
        1 mirlkniyhm lsyayrilne egyksiagee fenihdlmat ilvkgvssqc krglhkdyiq
       61 rteitgslkg kidvsnsikg ntlirrsmvc hvdnfsenil lnqiikstmv llirnknvki
      121 girkelksli lffenvdlve pqsinwsavs fhrnnatykl linicqlvik gmlmttesge
      181 lkmkqfiddq qmhqlyerfl lnyykkefpe ysasasyidw nvdngitefl pamktditls
      241 qggeninc
//
LOCUS       WP_235197530             130 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleoside 2-deoxyribosyltransferase [Planococcus sp. 107-1].
ACCESSION   WP_235197530
VERSION     WP_235197530.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 130)
  AUTHORS   Porter,D.J., Merrill,B.M. and Short,S.A.
  TITLE     Identification of the active site nucleophile in nucleoside
            2-deoxyribosyltransferase as glutamic acid 98
  JOURNAL   J Biol Chem 270 (26), 15551-15556 (1995)
   PUBMED   7797550
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016874.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05014.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..130
                     /product="nucleoside 2-deoxyribosyltransferase"
                     /calculated_mol_wt=14158
     Region          4..92
                     /region_name="Nuc_deoxyrib_tr"
                     /note="Nucleoside 2-deoxyribosyltransferase; cl46294"
                     /db_xref="CDD:480634"
ORIGIN      
        1 mkfyiassfr nieavrlvae rlisngfvlt ydwthgaais iaeletigks ekqavmesdv
       61 viimlpagkg shvemgialg tgkqvflysp detvndlalt stfyhlpevf kvigtiedlv
      121 geirskaafy
//
LOCUS       WP_235197550             153 aa            linear   BCT 02-MAR-2025
DEFINITION  immunoglobulin-like domain-containing protein [Planococcus sp.
            107-1].
ACCESSION   WP_235197550
VERSION     WP_235197550.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042533.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20251.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..153
                     /product="immunoglobulin-like domain-containing protein"
                     /calculated_mol_wt=17097
     Region          46..148
                     /region_name="Big_14"
                     /note="Bacterial Ig-like domain; pfam20251"
                     /db_xref="CDD:466402"
ORIGIN      
        1 mkvvlvssil lmicflsacq eesakpasen nlieaktqei pssrdglsle leqndypite
       61 keitgiytnh teqelsygkg fsvekniegt wyylqfnedy gitdeghilp sgkevketys
      121 lnelesavep gryrvikrfg argiaaefny ssp
//
LOCUS       WP_235197544             159 aa            linear   BCT 02-MAR-2025
DEFINITION  YrvL family regulatory protein [Planococcus sp. 107-1].
ACCESSION   WP_235197544
VERSION     WP_235197544.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 159)
  AUTHORS   MacLellan,S.R., Helmann,J.D. and Antelmann,H.
  TITLE     The YvrI alternative sigma factor is essential for acid stress
            induction of oxalate decarboxylase in Bacillus subtilis
  JOURNAL   J Bacteriol 191 (3), 931-939 (2009)
   PUBMED   19047353
REFERENCE   2  (residues 1 to 159)
  AUTHORS   MacLellan,S.R., Wecke,T. and Helmann,J.D.
  TITLE     A previously unidentified sigma factor and two accessory proteins
            regulate oxalate decarboxylase expression in Bacillus subtilis
  JOURNAL   Mol Microbiol 69 (4), 954-967 (2008)
   PUBMED   18573182
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025547.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14184.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..159
                     /product="YrvL family regulatory protein"
                     /calculated_mol_wt=17755
     Region          18..124
                     /region_name="YrvL"
                     /note="Regulatory protein YrvL; pfam14184"
                     /db_xref="CDD:433758"
ORIGIN      
        1 mknkkeaipi kkfipigitl givlviaagf affeyillkl lgfqydsiha lifffviylf
       61 lelpislian avpkalksln mihssrgwla fvlqtastfg liaaidhfme tisiswqgaf
      121 lfalcaglin fiarkdepep laagsrefre ierkfdskr
//
LOCUS       WP_235197609             158 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: flavodoxin domain-containing protein [unclassified
            Planococcus (in: firmicutes)].
ACCESSION   WP_235197609
VERSION     WP_235197609.1
KEYWORDS    RefSeq.
SOURCE      unclassified Planococcus (in: firmicutes)
  ORGANISM  unclassified Planococcus (in: firmicutes)
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012481.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00258.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="unclassified Planococcus (in: firmicutes)"
                     /db_xref="taxon:2662419"
     Protein         1..158
                     /product="flavodoxin domain-containing protein"
                     /GO_function="GO:0010181 - FMN binding [Evidence IEA]"
                     /calculated_mol_wt=17684
     Region          9..149
                     /region_name="FMN_red"
                     /note="NADPH-dependent FMN reductase; cl00438"
                     /db_xref="CDD:469770"
ORIGIN      
        1 mdstnykpki aivyasitgn tkasaemlae icqanglete lwaindfplt ellrcdivlv
       61 gtytwgngei pkelyslfha fetlerkhlv tavfgtgdsf faefcgavnr frdmlfvqta
      121 laatlkielq pqeidkirce kfiesalkkh ielktent
//
LOCUS       WP_235197702             289 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Planococcus sp. 107-1].
ACCESSION   WP_235197702
VERSION     WP_235197702.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..289
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=32576
     Region          21..104
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
     Region          133..280
                     /region_name="GyrI-like"
                     /note="GyrI-like small molecule binding domain; cl41982"
                     /db_xref="CDD:455327"
     Region          166..>210
                     /region_name="CDC6"
                     /note="Cdc6-related protein, AAA superfamily ATPase
                     [Replication, recombination and repair]; COG1474"
                     /db_xref="CDD:441083"
ORIGIN      
        1 mnhyeiieda lmhieenleq plsldsvaas anlskyyfhr lfsamigcsl ndyllarrln
       61 asldfiqnqk dslteiayrl nfgtqssfnr afkrqyqlap galrtgsrri satpvptvvk
      121 ravkningdv vanfsltele hitlsgiafe vdlitdayka eirsyakkll shldesasgp
      181 cyvvysncqp dstrfkvlfg ipsaikidep yyftvdlppl fcakftysgd lldignvlks
      241 dyarflkisk qetedstiel vqvfddvhhl esdyhiyapi kklpidsdf
//
LOCUS       WP_235197997             181 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar phosphate nucleotidyltransferase [Planococcus sp. 107-1].
ACCESSION   WP_235197997
VERSION     WP_235197997.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 181)
  AUTHORS   Jensen,S.O. and Reeves,P.R.
  TITLE     Domain organisation in phosphomannose isomerases (types I and II)
  JOURNAL   Biochim Biophys Acta 1382 (1), 5-7 (1998)
   PUBMED   9507048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012695.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00483.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..181
                     /product="sugar phosphate nucleotidyltransferase"
                     /GO_function="GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=20184
     Region          5..179
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
     Site            order(8,10,55,122,124)
                     /site_type="active"
                     /db_xref="CDD:132997"
ORIGIN      
        1 mrlmavidas vrmsgledlt myrstasipf sgryrlidfa lsnvvnsnin lvgvfpaypf
       61 vslldhigvg kswdlnrrkd glfflpgsqk agnyvsvgaf smlgehrqff akskqehvvi
      121 tncftvaqld fddmldahla sgmditeaic ddgthlksyi lskkllvelm esyeekenhq
      181 h
//
LOCUS       WP_235198000             269 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: SDR family oxidoreductase [unclassified Planococcus
            (in: firmicutes)].
ACCESSION   WP_235198000
VERSION     WP_235198000.1
KEYWORDS    RefSeq.
SOURCE      unclassified Planococcus (in: firmicutes)
  ORGANISM  unclassified Planococcus (in: firmicutes)
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="unclassified Planococcus (in: firmicutes)"
                     /db_xref="taxon:2662419"
     Protein         1..269
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=28763
     Region          10..265
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(29,31..32,34,53..55,107..109,156..158,171,175,
                     201..204)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187613"
     Site            order(132,158,171,175)
                     /site_type="active"
                     /db_xref="CDD:187613"
ORIGIN      
        1 madldfnntd legykasgal egkvaiitga nsgigravai ayvkegakvv igylddedat
       61 aetleviksy ggeakalsgd lgksencdkl vqfalesfgq idilvnnagy qypqtsptdi
      121 tdeqllktfe ikafamfylv raarphlkdg ariintasin ayrghsdlid ysgangamvs
      181 mtralarrfv regiavngia pgpvwtplit ktfgdlnpdv gedfgkdvpa grpaqpyelv
      241 kafvfladpq nsymtgqflh mnggdfmst
//
LOCUS       WP_235198037             327 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-binding dehydrogenase [Planococcus sp. 107-1].
ACCESSION   WP_235198037
VERSION     WP_235198037.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00107.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..327
                     /product="zinc-binding dehydrogenase"
                     /calculated_mol_wt=35687
     Region          1..325
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
     Site            order(36..38,46,137,141,162..165,167..168,186..187,191,
                     225..226,247..248,272..274)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176227"
ORIGIN      
        1 mkafviesge lklkeieepk akrgevvval rtaglnrrdl gltkrwgnkp ealiigsdga
       61 gvieavgegv kdfkvgdevi inpalrwydn saappkgfdi lgmpdhgtfa ekialsaeqv
      121 ekkpvhlswe eagslalagl tgyralftkg gilagqtlfi pgagggvaty liqyannvga
      181 rvivtsqsee krkralelga dlaidsnsdw ekelaeetid lvidsvgrat fnrsldvlkl
      241 ggrivifgat tednvdfnlr kffygqyqlf gstmgsreel rnllvhmekf dmhpivdrvf
      301 qleeaqqafd ylaegkqfgk vvlkins
//
LOCUS       WP_235198055             263 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein
            [Planococcus sp. 107-1].
ACCESSION   WP_235198055
VERSION     WP_235198055.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 263)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..263
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=28009
     Region          42..261
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mkkisllmll mavmlviaac gsddsaddss gssgdggseg tkytvgidtt yppfefeeeg
       61 eytgididli taiaenqgfd iefspmdfsg iipalqagql diaiagmsit derknvvdfs
      121 dpyfeagltl vvssdnmdie tledlegktv avksgttgae faranegeyg ftvsqfedsp
      181 smfqevsngn advliedypv iayaisesgl dlktvgerln gdqygiavlk genadvleqi
      241 naglqelrds geydeilaky iae
//
LOCUS       WP_235198072             268 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Planococcus sp.
            107-1].
ACCESSION   WP_235198072
VERSION     WP_235198072.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 268)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 268)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 268)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 268)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..268
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=29960
     Region          13..>250
                     /region_name="Uup"
                     /note="ATPase components of ABC transporters with
                     duplicated ATPase domains [General function prediction
                     only]; COG0488"
                     /db_xref="CDD:440254"
ORIGIN      
        1 miisqfqqim chfanqklfn qikgdiaegq riglvgrnge gkttllnvla gelqptegav
       61 twkkgcrigl lkqspdepee wtvaellkta faglvqiqee leametqmas aapeemerll
      121 arygtmqedf iqrggyeiea ridqvlnglk ikvlkfeewg hlsggertkv glaklllqep
      181 glllldeptn hldleaiewl gafishykgt ivlvshdryf ldeavthiwe ldqgdliqyk
      241 gnysayvker gspvinrvsa isrpakkd
//
LOCUS       WP_235198137             382 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Planococcus sp. 107-1].
ACCESSION   WP_235198137
VERSION     WP_235198137.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 382)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 382)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 382)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..382
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=42852
     Region          9..381
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(94,124,126,157,159,363..365,367,369)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 makyrfeeee hemfrkslrk flekeaipqy gqwekdhiip ksfwsrlgem gflcpqveeq
       61 yggfgldfry aviigeeler vgtsltgvgl hnditvpyie aygneeqkqr wlpgcvtgey
      121 itaiamtepg agsdlanist tavrdgdnyi vngqktfitn ginsthvvvv vrtdpkaesk
      181 hrgisllmve egmpgftkgr kldkvglhaq dtselyfedc vvpaanlige enkgftylme
      241 klqqerlvva iaaqtaseem lnmtldyvks rkafgksvgs fqntqfklve iateielghs
      301 flesliedhm agkdivskvs makywltdra kkvaaecmql hggygymeey eiarryrdtp
      361 vaaiyagsne imktiiakrm gl
//
LOCUS       WP_235198176             449 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acyltransferase [Planococcus sp. 107-1].
ACCESSION   WP_235198176
VERSION     WP_235198176.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024836.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13444.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..449
                     /product="GNAT family N-acyltransferase"
                     /EC_number="2.3.1.-"
                     /calculated_mol_wt=49220
     Region          19..110
                     /region_name="Acetyltransf_5"
                     /note="Acetyltransferase (GNAT) domain; pfam13444"
                     /db_xref="CDD:463880"
     Region          179..>442
                     /region_name="PucG"
                     /note="Archaeal aspartate aminotransferase or a related
                     aminotransferase, includes purine catabolism protein PucG
                     [Amino acid transport and metabolism, Nucleotide transport
                     and metabolism]; COG0075"
                     /db_xref="CDD:439845"
ORIGIN      
        1 mywckiarse eefqaiaqln yetfveeipq headgsgvrv dpfhaqntyl ivladtllvg
       61 mialrserpf sldlkigeve qylpnsrkic eirlmavrkq hrngrvfflm aralsdycya
      121 egfdaavisg ttrqlklygq lgfkaiadpv gtgdavfvpm attrgqyaes vaarlqtgrk
      181 lflpgpvklt gplaapfted pvshrsstfq avleetkekl kemtgscphf lfgsgtlane
      241 amlaqisrlq srglvlvnge fgrrlkdqas kwkldfevee qewgsafsla siqkrlqqqs
      301 fgwllmvhge tstgmlndig sfaaicdqlq vklcvdavss fgavplsfen iwlatavsgk
      361 aigtssglai vfasysvtpd aalpayldlg hysnkvpftl sfsllksfki aldayperfg
      421 ktggsagfse agycklaeac rrfsdsdyf
//
LOCUS       WP_235198338             347 aa            linear   BCT 02-MAR-2025
DEFINITION  aromatic acid exporter family protein [Planococcus sp. 107-1].
ACCESSION   WP_235198338
VERSION     WP_235198338.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017856.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06081.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..347
                     /product="aromatic acid exporter family protein"
                     /calculated_mol_wt=39073
     Region          8..143
                     /region_name="ArAE_1"
                     /note="Aromatic acid exporter family member 1; pfam06081"
                     /db_xref="CDD:428756"
ORIGIN      
        1 mrpfhfngsr ilktgiaifl taiicewfgw ppvfavitai vtieptvsds ikkglvrfpa
       61 saigsafavl fitlfgnspi tyalaavati lvcsrlklhd gllvatltav amievihdhv
      121 liaffirlgt ttigllvsta vnmlifppny qrdilksiqr isaqagrmle htfhtilfeg
      181 danlqedkel vkrltteiqk aekliqfqrd dfslyakvrn retklqmaer qllflhnlef
      241 hldallripl dnlkwtpaer niimhavael addlqnstsy nhekhqhqlk iitdffwdds
      301 ksastsdalq pvlfppqfki lyelimiydl vdkffnpgtv kaaaeae
//
LOCUS       WP_235198224             255 aa            linear   BCT 02-MAR-2025
DEFINITION  aquaporin [Planococcus sp. 107-1].
ACCESSION   WP_235198224
VERSION     WP_235198224.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 255)
  AUTHORS   Froger,A., Tallur,B., Thomas,D. and Delamarche,C.
  TITLE     Prediction of functional residues in water channels and related
            proteins
  JOURNAL   Protein Sci 7 (6), 1458-1468 (1998)
   PUBMED   9655351
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012455.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00230.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..255
                     /product="aquaporin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015267 - channel activity [Evidence
                     IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=25805
     Region          1..226
                     /region_name="MIP"
                     /note="Major intrinsic protein (MIP) superfamily. Members
                     of the MIP superfamily function as membrane channels that
                     selectively transport water, small neutral molecules, and
                     ions out of and between cells. The channel proteins share
                     a common fold: the N-terminal...; cl00200"
                     /db_xref="CDD:444743"
     Site            order(46,64..66,181..182,185,188)
                     /site_type="active"
                     /note="amphipathic channel [active]"
                     /db_xref="CDD:238204"
     Site            order(66..68,185..187)
                     /site_type="other"
                     /note="Asn-Pro-Ala signature motifs"
                     /db_xref="CDD:238204"
ORIGIN      
        1 mkkylaefig tfilvflgtg aavvlggysg gtdngylgvl aiafafglsi vaaayaighi
       61 sgchvnpavs lavwmsgnlt akefggyvva qivgafagsa flafvaanst tlegygangy
      121 gdlsavglnl lgafgveiil tfifvlailg vtsskatshm ggivigltlv lvhiigiplt
      181 gtsvnparsl apaifaggda laqvwlfiaa pligaalaal vfrsffyike etglevagds
      241 ridgesgplp nrsrr
//
LOCUS       WP_235198372              98 aa            linear   BCT 02-MAR-2025
DEFINITION  aspartate dehydrogenase domain-containing protein [Planococcus sp.
            107-1].
ACCESSION   WP_235198372
VERSION     WP_235198372.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 98)
  AUTHORS   Yang,Z., Savchenko,A., Yakunin,A., Zhang,R., Edwards,A.,
            Arrowsmith,C. and Tong,L.
  TITLE     Aspartate dehydrogenase, a novel enzyme identified from structural
            and functional studies of TM1643
  JOURNAL   J Biol Chem 278 (10), 8804-8808 (2003)
   PUBMED   12496312
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014063.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01958.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..98
                     /product="aspartate dehydrogenase domain-containing
                     protein"
                     /GO_function="GO:0033735 - aspartate dehydrogenase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=10525
     Region          <2..96
                     /region_name="AspD"
                     /note="L-aspartate dehydrogenase, NAD(P)-dependent [Amino
                     acid transport and metabolism]; COG1712"
                     /db_xref="CDD:441318"
ORIGIN      
        1 mifegsafea vekfpkninv alvlaiagig vdktrvriiv dpdierntht ieaegtfgrm
       61 klqvennpmp snpktsllaa lsilsvlqnr gnalrign
//
LOCUS       WP_235198203             389 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Planococcus sp. 107-1].
ACCESSION   WP_235198203
VERSION     WP_235198203.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 389)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 389)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..389
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=45376
     Region          10..54
                     /region_name="Arm-DNA-bind_4"
                     /note="Arm DNA-binding domain; pfam14657"
                     /db_xref="CDD:464242"
     Region          62..378
                     /region_name="XerD"
                     /note="Site-specific recombinase XerD [Replication,
                     recombination and repair]; COG4974"
                     /db_xref="CDD:443999"
ORIGIN      
        1 mahfrekngs weyiisagkd pvtkkytkir ksgfrtktaa knearrieee lkqgtyvkes
       61 kttfgefvpq wlshyekrak issvrarria akrlldeweh yplssitmam yqqrlddlsl
      121 qfsenyldsi hstgrmifnh amklkmikfn ptehfekprm vkdevneeiv emesfldree
      181 lmrflllake hgllgdlvlf ttlaysglri gelislkesd idmntnevnv tktyynptnn
      241 kkefklltpk tkgsvrkfel dpfvisllke hikqhkevkm knrkiykdhg fifadeqgyp
      301 ptvkkvsirl qrllkmmetd khitphsfrh tnislliean vpigeiqrrv ghtditttmn
      361 iythmtkntk sqatqlfssh lsalseklq
//
LOCUS       WP_235198407             339 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Planococcus sp.
            107-1].
ACCESSION   WP_235198407
VERSION     WP_235198407.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 339)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..339
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=38250
     Region          1..257
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(7,9..10,12,31..33,59..61,93..95,137,141,161..164)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187575"
     Site            order(72,95,137,141)
                     /site_type="active"
                     /db_xref="CDD:187575"
ORIGIN      
        1 mnililggtr flgrflteaa lssghevtlf nrgkanpdlf pevekltgdr ygdlqalrgr
       61 rwdavidtsg ylpwsvqesa ellaksvghy tfissasvyi dlespginee havgqisadk
      121 leelktkeae aainehygel kflceqever afpegalnir pglivgpydf tdrftywvnr
      181 vdkggevlap grrdkeiqfi dvgdladwil rlveeqrtgt fnatgpesal tmekfleeck
      241 atlksdadfv wvdeqfllgh kvegwselpl wipdsmymng flgvdirkav qtglrfrpls
      301 dtiratrewe mtretaerka gmdpekeqav lqdwqqral
//
LOCUS       WP_235198421             360 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4179 domain-containing protein [Planococcus sp. 107-1].
ACCESSION   WP_235198421
VERSION     WP_235198421.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025159.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13786.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..360
                     /product="DUF4179 domain-containing protein"
                     /calculated_mol_wt=38819
     Region          1..>75
                     /region_name="DUF3379"
                     /note="Protein of unknown function (DUF3379); pfam11859"
                     /db_xref="CDD:432136"
     Region          41..135
                     /region_name="DUF4179"
                     /note="Domain of unknown function (DUF4179); pfam13786"
                     /db_xref="CDD:463985"
     Region          218..341
                     /region_name="DUF5643"
                     /note="Family of unknown function (DUF5643); pfam18705"
                     /db_xref="CDD:465842"
ORIGIN      
        1 mngkensikq alekievpea rldaiieesf wetaaapvkv krrnrwmpav atvvlvagis
       61 aatlsaapal anymaqlpvi gnvfsifaen khgvaafdqf sedvgliqts ngitisidea
      121 iydgtkltft yqvaseapld ssaylssfpe lleadgptgg mqsevidgvi agiaeithld
      181 edaevvnvvw epqvlfteek aiagdwkfef avkqlaqkpi tldekvssdg vtvhlqelti
      241 tdiavniayq qlvdpaivea gnfveaelia gddlgnvyrm pfnggstpgd altaedfewt
      301 aslrgldpna siltfypfgh isgpaidpkr vefdalefnl kegthrliqd pdipepppfe
//
LOCUS       WP_235198459             403 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Staphylococcus xylosus].
ACCESSION   WP_235198459
VERSION     WP_235198459.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus xylosus
  ORGANISM  Staphylococcus xylosus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Staphylococcus xylosus"
                     /db_xref="taxon:1288"
     Protein         1..403
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=47147
     Region          116..396
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mndlkykfgk tdnivryyds ndsyvlyrky fkdskilefe dfmspiskkr iqrwqynnyg
       61 llhrkiyysp nsykkiaeef fdaneiiyck kffedndann viqiqtytdn rphktfktek
      121 qlfqhyfdnk fsendtvfcd arlldkplln kkintknilv fhsshmnadk vepsykfale
      181 nyhkvskyll ltnkqkndiq nvsnissdki sviphfinsn pysnnvvked rfvfigriae
      241 ekqidhilka yskflesgyn tsldiygrge fsevsvienl ifdlgiqnkv hihgftndps
      301 yefqkskasl ltssfegfgl svmesinvgc pvisydvkyg pseiidhgkn gylveknnie
      361 qltkymldii ekplsnvktk peltfdsakn nykqlfnsig ynl
//
LOCUS       WP_235198513             148 aa            linear   BCT 02-MAR-2025
DEFINITION  putative immunity protein [Planococcus sp. 107-1].
ACCESSION   WP_235198513
VERSION     WP_235198513.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF044575.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21805.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..148
                     /product="putative immunity protein"
                     /calculated_mol_wt=16494
ORIGIN      
        1 masqhfvdsd ikekieeqlg kidhftavrw aadcaehvls yyenlfpkdq rlhkaieaah
       61 lwtkgevkvr earkaafeah aaaretedea aasaaraagq avstahmaeh aihastyavk
      121 svafakdfse davaeerkwq yqrlleme
//
LOCUS       WP_235198547             310 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase [Planococcus sp. 107-1].
ACCESSION   WP_235198547
VERSION     WP_235198547.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 310)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 310)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..310
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=34225
     Region          6..306
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     Site            order(19..21,53,58,84,123,153..154,173,201..207,258,
                     275..278,283,286..287)
                     /site_type="active"
                     /db_xref="CDD:381296"
     Site            order(53,58,84,123)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381296"
ORIGIN      
        1 mkfsvlqktd mqisalglgt navgghnlyk nlneetgkdf vraaldngit fidtadvygk
       61 grseelvgev lkeydrsrfi iatkggsdwr ngtknnapay lrraleesle rlqldyvdly
      121 yihwpdgetp iseavaelsq lkkegkikai gvsnvsleql keanstdeis avqlaynmln
      181 reieqeilpy cvenkisvva ygplafgilg gtytedfvle dgdwrnsvpl fqegnfekni
      241 riveqlkrva dtkgtdvsnl alawlleqpg vdavipggkk peqvlsniaa sdirleaevl
      301 neidqilkgq
//
LOCUS       WP_235198557            1048 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Planococcus sp. 107-1].
ACCESSION   WP_235198557
VERSION     WP_235198557.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 1048)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..1048
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=118174
     Region          1..>238
                     /region_name="MHYT"
                     /note="MHYT domain, NO-binding membrane sensor [Signal
                     transduction mechanisms]; COG3300"
                     /db_xref="CDD:442529"
     Region          <234..>378
                     /region_name="KinE"
                     /note="Sporulation sensor histidine kinase E [Cell cycle
                     control, cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG5809"
                     /db_xref="CDD:444511"
     Region          369..621
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          <607..1045
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 masfspflii lsvfiaifss yillvligkl advakgkrqi fvsaasvfmg lgiftmhlig
       61 msafhfygea gisyhallll aslaisilas fiafqvlyng kttkvnmifs glmlgigiil
      121 ghyiamaavq gdetsrlnlg ffvlsvavaf lfstaaikif mnfkrlnksl srkvmsavll
      181 glaisfmhyt amnanivgvh fsaagpfwis emeimnsifa lsaalvvlam lfayadyrki
      241 vvenrlieen kesenrfrkl velspepiiv hsqgklifvn eaclkmvgve nkelvlgksi
      301 ldfvpasfqp ivkerihhmm qggnaapieq qfikpdgsli dvevtgaqmk fegkpaiqli
      361 lrditlekki rleleaseqr yqslfaynpd gvfsmdpegr mlnvnnaimd ltgytkeefi
      421 gatfhpivap pyleetkmhf eqallgipqn yelqcirkng ewvylhitnl pikidgeiig
      481 vygiaknitk ekealrlmee neekyrslfe nnldavfeia ldgsfknvnk rgeeltgftq
      541 kelrdmpfte livektarvk evfelakqgk alqaeqklid keknelqvdl nvvpirkqgq
      601 vdgmfsitrn vsekkqlemr mndlaftdql tglpnrhwfy enlsaiaara rqydrslavm
      661 lidfddfkgv ndllghqggd lflkkvseri ksclrptdrl srhggdefii afenvteaym
      721 irlakkifqv meqpvelldh emivtisvgi smqdkctnne etlireadfa lysakekgkn
      781 nyqfftedln qkvsrkfeve nalrkaiekn efqlyyqpqv dlrtekmvgl eallrwnpsi
      841 gtvspaefip iaeetglilp igewvleeac rqiceweksg kpkvkvsvnv sarqfrdsqf
      901 nrkveailaa yqidpaylei eitesvmmni eesskvirgl rglgikiaid dfgagysslt
      961 viknieidtl kidksliddi lvnprnlsil kaiievgkgl htlvvvegie kedqvellrn
     1021 fdvigqgyyy srpcpplale nmwenvah
//
LOCUS       WP_235198611              83 aa            linear   BCT 02-MAR-2025
DEFINITION  YfhJ family protein [Planococcus sp. 107-1].
ACCESSION   WP_235198611
VERSION     WP_235198611.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025409.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14043.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..83
                     /product="YfhJ family protein"
                     /calculated_mol_wt=9379
     Region          3..76
                     /region_name="WVELL"
                     /note="WVELL protein; pfam14043"
                     /db_xref="CDD:433668"
ORIGIN      
        1 mnetidqlvt elleknanls eekartwiel lvsdfeasya kagydyqgta vvekvirqwi
       61 ssygdkihef agtnpkyahl lee
//
LOCUS       WP_235198573             576 aa            linear   BCT 02-MAR-2025
DEFINITION  adenine deaminase C-terminal domain-containing protein [Planococcus
            sp. 107-1].
ACCESSION   WP_235198573
VERSION     WP_235198573.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024774.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13382.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..576
                     /product="adenine deaminase C-terminal domain-containing
                     protein"
                     /calculated_mol_wt=65013
     Region          23..>91
                     /region_name="YtcJ"
                     /note="Predicted amidohydrolase YtcJ [General function
                     prediction only]; COG1574"
                     /db_xref="CDD:441182"
     Region          73..563
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
     Site            order(85,87,208,229,281)
                     /site_type="active"
                     /db_xref="CDD:238617"
ORIGIN      
        1 mgnplwrnte irqqlkiidk elapdlllvn atylhgifkk wmtgniwikg drivyagpdm
       61 akvdastevi emegkyivpg yiephvhpyq lynpqtfany aaqggtttfl sdnltlflsl
      121 enekafslld emaelpfnfy wwtrfdsqte lseedrlfts ksvgewlert dvwlggeltg
      181 wpkllagddq mlywiqkakm slkkieghfp gasektlarm rllgadgdhe amtveevemr
      241 llhgygvtlr hssirpdlpe llkgivekel nvfdklmmtt dgstpgfhld gvmdlcikia
      301 leagvpaida ymmasynvar yynvtslhgl iatgrfanln ildslenpvp sgviskgvwl
      361 krdgkkvfdl pkidwsvmpd leldfdlted dfqfsmpfgi emindvitkp ysvsvdthdg
      421 tlsqdheesf lmlldkhgkw rvntlikgfa agvsgfassy sntgdiilig ksrkdmwraf
      481 delkrlkggi vlveegetvc slplpiggvm selpmeelip qemvlkkalk drgytkgdav
      541 ytllflqath lpyvritqrg iydvmnkkil fpafmr
//
LOCUS       WP_235198670             258 aa            linear   BCT 02-MAR-2025
DEFINITION  enoyl-CoA hydratase-related protein [Planococcus sp. 107-1].
ACCESSION   WP_235198670
VERSION     WP_235198670.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012596.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00378.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..258
                     /product="enoyl-CoA hydratase-related protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=28274
     Region          1..258
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     Site            order(23,25,58,62..66,105,107..109,131..132,135)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(64,109)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(89,97,118..121,133..136,142,144..146,148..149,
                     154..155,157..158,160..161,164,175,178,193,196..197)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
ORIGIN      
        1 mntihyeqqg nlafitlnrp eamnafnydm ltelgqvvea irinpdirvv vftgagekaf
       61 svgadlkerk tltdqhvkrn ifkigevftt ienlpqptia mmngfafggg melalacdfr
      121 iiaddtllgl tetslaiipg aggtqrlprl igeskameli ltarrlkspe aldyglvtkv
      181 vprdelieat aqfadmmlan gpialqqaky aikngmnadl qtglnierka yeltiptedr
      241 iealmafgek rkpvfkgk
//
LOCUS       WP_235198667              41 aa            linear   BCT 02-MAR-2025
DEFINITION  protein YhfH [Planococcus sp. 107-1].
ACCESSION   WP_235198667
VERSION     WP_235198667.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 41)
  AUTHORS   Reder,A., Hoper,D., Weinberg,C., Gerth,U., Fraunholz,M. and
            Hecker,M.
  TITLE     The Spx paralogue MgsR (YqgZ) controls a subregulon within the
            general stress response of Bacillus subtilis
  JOURNAL   Mol Microbiol 69 (5), 1104-1120 (2008)
   PUBMED   18643936
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14149.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..41
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     gene            1..41
                     /gene="yhfH"
     Protein         1..41
                     /product="protein YhfH"
                     /calculated_mol_wt=4606
     Region          2..38
                     /region_name="YhfH"
                     /note="YhfH-like protein; pfam14149"
                     /db_xref="CDD:433750"
ORIGIN      
        1 mienvveffk nlppkqcvtc gekieeqhec ygskcdscke l
//
LOCUS       WP_235198682             311 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleoside recognition domain-containing protein [Planococcus sp.
            107-1].
ACCESSION   WP_235198682
VERSION     WP_235198682.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 311)
  AUTHORS   Hantke,K.
  TITLE     Is the bacterial ferrous iron transporter FeoB a living fossil?
  JOURNAL   Trends Microbiol 11 (5), 192-195 (2003)
   PUBMED   12781516
REFERENCE   2  (residues 1 to 311)
  AUTHORS   Loewen,S.K., Ng,A.M., Yao,S.Y., Cass,C.E., Baldwin,S.A. and
            Young,J.D.
  TITLE     Identification of amino acid residues responsible for the
            pyrimidine and purine nucleoside specificities of human
            concentrative Na(+) nucleoside cotransporters hCNT1 and hCNT2
  JOURNAL   J Biol Chem 274 (35), 24475-24484 (1999)
   PUBMED   10455109
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019292.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07670.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..311
                     /product="nucleoside recognition domain-containing
                     protein"
                     /calculated_mol_wt=33334
ORIGIN      
        1 mstlknglka glkttwtlgk vifpitlivt mlqftpvlpf iidlvaplmg lfglsgdaai
       61 plvlgnalnl yagiagilsl eltvkevfil avmlsfshni fietgvalkv gvklwvvlvv
      121 rfglaalsgi iinlvwkggg eiaqygfape aaadpqswig ifllglekat fgvlqlamiv
      181 iplmlmiqil kdkgylqris dgmgpltrll gikknasltl asglifglam gagvmiqavq
      241 edgvskkdat lafiflvach aivedtlifi plgipiwplf lirlitalvl tifvsyvwrk
      301 seanrkevys t
//
LOCUS       WP_235198747             126 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2268 domain-containing putative Zn-dependent protease
            [Planococcus sp. 107-1].
ACCESSION   WP_235198747
VERSION     WP_235198747.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021537.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10026.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..126
                     /product="DUF2268 domain-containing putative Zn-dependent
                     protease"
                     /note="predicted Zn-dependent protease with a strongly
                     conserved HExxH motif; predicted Zn-dependent protease
                     with a strongly conserved HExxH motif; predicted
                     Zn-dependent protease with a strongly conserved HExxH
                     motif; predicted Zn-dependent protease with a strongly
                     conserved HExxH motif; predicted Zn-dependent protease
                     with a strongly conserved HExxH motif"
                     /calculated_mol_wt=14349
     Region          <13..124
                     /region_name="DUF2268"
                     /note="Predicted Zn-dependent protease (DUF2268); cl22923"
                     /db_xref="CDD:473995"
ORIGIN      
        1 mvyeemqknl lftvaertvm egkadvfakm iypeaspkwa nfssesekah avenfkafnq
       61 sadpeiimef hngnpakqip qwahykignd mvqtylsehp emsipewtal eteaflknsg
      121 yqdaeq
//
LOCUS       WP_235198759             171 aa            linear   BCT 02-MAR-2025
DEFINITION  C39 family peptidase [Planococcus sp. 107-1].
ACCESSION   WP_235198759
VERSION     WP_235198759.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024919.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13529.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..171
                     /product="C39 family peptidase"
                     /calculated_mol_wt=20216
     Region          26..138
                     /region_name="Peptidase_C39_like"
                     /note="Peptidase family C39 mostly contains
                     bacteriocin-processing endopeptidases from bacteria. The
                     cysteine peptidases in family C39 cleave the
                     'double-glycine' leader peptides from the precursors of
                     various bacteriocins (mostly non-lantibiotic). The
                     cleavage...; cl00296"
                     /db_xref="CDD:469710"
ORIGIN      
        1 mkvlipfqgm sqydqsiaae lqgsaceptt aaailkhhek qeydvnelyr algttriglf
       61 twrfkrklnr fgqkryrvvk trsidqvkee llqgrpmamk fdryfsfrwh fpssykyhwv
      121 pligfeerpd dlilyihdng krnrpskiqa vsyqqnrkvl tflkiiptqt d
//
LOCUS       WP_235198786             165 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Planococcus sp. 107-1].
ACCESSION   WP_235198786
VERSION     WP_235198786.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..165
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=18364
     Region          10..134
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mkkskrgnvw lgaaglvvns knewlvvkkr ygglhgkwsl pagfvnadet idqaamrevk
       61 eetgidctlf glvgfrsgvi reevsdnmgi fllkpvdeqq rikaqldely eaawrspeel
      121 sadpdasvml hemadfllde gfeaiedvdp gdvfgyssyk lffkk
//
LOCUS       WP_235198818             337 aa            linear   BCT 02-MAR-2025
DEFINITION  metal ABC transporter solute-binding protein, Zn/Mn family
            [Planococcus sp. 107-1].
ACCESSION   WP_235198818
VERSION     WP_235198818.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 337)
  AUTHORS   Ilari,A., Alaleona,F., Tria,G., Petrarca,P., Battistoni,A.,
            Zamparelli,C., Verzili,D., Falconi,M. and Chiancone,E.
  TITLE     The Salmonella enterica ZinT structure, zinc affinity and
            interaction with the high-affinity uptake protein ZnuA provide
            insight into the management of periplasmic zinc
  JOURNAL   Biochim Biophys Acta 1840 (1), 535-544 (2014)
   PUBMED   24128931
REFERENCE   2  (residues 1 to 337)
  AUTHORS   Gabbianelli,R., Scotti,R., Ammendola,S., Petrarca,P., Nicolini,L.
            and Battistoni,A.
  TITLE     Role of ZnuABC and ZinT in Escherichia coli O157:H7 zinc
            acquisition and interaction with epithelial cells
  JOURNAL   BMC Microbiol 11, 36 (2011)
   PUBMED   21338480
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 337)
  AUTHORS   Lee,Y.H., Deka,R.K., Norgard,M.V., Radolf,J.D. and Hasemann,C.A.
  TITLE     Treponema pallidum TroA is a periplasmic zinc-binding protein with
            a helical backbone
  JOURNAL   Nat Struct Biol 6 (7), 628-633 (1999)
   PUBMED   10404217
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013465.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01297.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..337
                     /product="metal ABC transporter solute-binding protein,
                     Zn/Mn family"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=37257
     Region          31..337
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(98..99,102,186)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238499"
ORIGIN      
        1 mkklipllil illlaacgds ttgttseped daklhvyttv ypltyfteri ggeavtvesi
       61 ypagsnehsf eptqqdmial aeadlmfyvg lglegfidsa qktlknenve fvatadaitd
      121 eelvaatshe ehhegdahdd eshdeeahde eardeesheg hdhgstdphv wispvlsqkl
      181 aesikdslae adpenseife snyaelliel eeldrsfael aeqadnktff vshaafgyma
      241 epygleqvai aglnsqdeps qkelteivdl akeknikhii feqnvssnlt eviqkevgae
      301 alemnnlgvl tqenindeet yftlmeknle tlktalq
//
LOCUS       WP_235198868             193 aa            linear   BCT 02-MAR-2025
DEFINITION  general stress protein [Planococcus sp. 107-1].
ACCESSION   WP_235198868
VERSION     WP_235198868.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 193)
  AUTHORS   Periago,P.M., van Schaik,W., Abee,T. and Wouters,J.A.
  TITLE     Identification of proteins involved in the heat stress response of
            Bacillus cereus ATCC 14579
  JOURNAL   Appl Environ Microbiol 68 (7), 3486-3495 (2002)
   PUBMED   12089032
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022629.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11181.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..193
                     /product="general stress protein"
                     /calculated_mol_wt=19481
     Region          5..>53
                     /region_name="YflT"
                     /note="Heat induced stress protein YflT domain; cl46343"
                     /db_xref="CDD:480683"
ORIGIN      
        1 makqrvagsy qseseaiaai edlkrqgyrs edisvlskdk reaenimeet dthveegaaa
       61 galtggalgg lggvlaglga laipgigpiv aagpivaglt gaaagagigg lagaligmgi
      121 pedeaqryes qfnegsilvl vedqedfipd hndrdgfvdn kdpliggnss ttirgdqgld
      181 darsiekrgp agl
//
LOCUS       WP_235198895             282 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Planococcus sp. 107-1].
ACCESSION   WP_235198895
VERSION     WP_235198895.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 282)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 282)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..282
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=31572
     Region          <14..248
                     /region_name="PRK07201"
                     /note="SDR family oxidoreductase"
                     /db_xref="CDD:235962"
ORIGIN      
        1 mgtytllehf lfppvlfnrp klvkalsgkt ilitgassgi grslayllad ipchlilvar
       61 retilleike eiesphtevs vfgadlrnre qlagllkflh klpkgldiav snagisiyrp
      121 iedsldrfhd ftrtmainyf apvelmlsii pllkknsghv vnvstinall vpfpfwaayq
      181 asksafdvwf rsaspemnam giatttiylp lvktpmilpt payqkaaame pdhvakligt
      241 aiykkkkrhm pwwlifgqfg svifrrffet alpriirkge rl
//
LOCUS       WP_235198978             138 aa            linear   BCT 02-MAR-2025
DEFINITION  prepilin-type N-terminal cleavage/methylation domain-containing
            protein [Planococcus sp. 107-1].
ACCESSION   WP_235198978
VERSION     WP_235198978.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019575.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07963.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..138
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /calculated_mol_wt=14944
     Region          1..>62
                     /region_name="PilV"
                     /note="Type IV pilus assembly protein PilV [Cell motility,
                     Extracellular structures]; COG4967"
                     /db_xref="CDD:443993"
     Region          6..128
                     /region_name="type_IV_pilV"
                     /note="type IV pilus modification protein PilV; TIGR02523"
                     /db_xref="CDD:131575"
ORIGIN      
        1 mknekgltlv evlaavvlis ivlmgfmalf gttnkfavtn seklvvinla danlermkad
       61 pvlyfkntgy afppttlksg iditrtdtin gknylinidf tqntsesnls lynvtvtaks
      121 ptsnlsstve gylpyvkp
//
LOCUS       WP_235198984             158 aa            linear   BCT 02-MAR-2025
DEFINITION  prepilin-type N-terminal cleavage/methylation domain-containing
            protein [Planococcus sp. 107-1].
ACCESSION   WP_235198984
VERSION     WP_235198984.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019575.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07963.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..158
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /calculated_mol_wt=16552
ORIGIN      
        1 mkkfiqnklk dqkgltliel laviviiaii aaiavpaign iiensrysav ksdatnaiaa
       61 aniyftenpe gqkktgmtgv hvevkelkdk gyldsqgklk dadfltktgt ginikttaid
      121 ysggktvtfn satnqqitgd aqkgseagpi tvpkasan
//
LOCUS       WP_235198998             170 aa            linear   BCT 02-MAR-2025
DEFINITION  Spo0B domain-containing protein [Planococcus sp. 107-1].
ACCESSION   WP_235198998
VERSION     WP_235198998.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 170)
  AUTHORS   Varughese,K.I., Madhusudan, Zhou,X.Z., Whiteley,J.M. and Hoch,J.A.
  TITLE     Formation of a novel four-helix bundle and molecular recognition
            sites by dimerization of a response regulator phosphotransferase
  JOURNAL   Mol Cell 2 (4), 485-493 (1998)
   PUBMED   9809070
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026040.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14689.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..170
                     /product="Spo0B domain-containing protein"
                     /calculated_mol_wt=19345
     Region          9..150
                     /region_name="Spo0B"
                     /note="Stage 0 sporulation initiation phosphotransferase
                     Spo0B [Cell cycle control, cell division, chromosome
                     partitioning, Signal transduction mechanisms]; COG5802"
                     /db_xref="CDD:444504"
ORIGIN      
        1 mktpmtvaqs lrharhdfln elqlikmnld lgrldevqai irshgeaavq msrlsglkme
       61 kteewlllaq wrfpeirfhl nclaakapvh ldetysktie aliraaleqt dpyeeyecfi
      121 tfsnedsffi aeirltgewt eiavpetele ivkacgpdgl kiairaqmeg
//
LOCUS       WP_235199010             515 aa            linear   BCT 02-MAR-2025
DEFINITION  SH3 domain-containing protein [Planococcus sp. 107-1].
ACCESSION   WP_235199010
VERSION     WP_235199010.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019844.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08239.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..515
                     /product="SH3 domain-containing protein"
                     /calculated_mol_wt=55402
     Region          37..153
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          101..232
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          175..306
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          326..510
                     /region_name="AmiC"
                     /note="N-acetylmuramoyl-L-alanine amidase [Cell
                     wall/membrane/envelope biogenesis]; COG0860"
                     /db_xref="CDD:440621"
ORIGIN      
        1 mnrkwpivli lfillaagsl paakvpaaya agtdmkisas tvnirsgpgl sysvtgslsk
       61 getvnvvsqs dewyevnidg etgwiaswlt tsagnasesg asgetavstv drlnvraqpd
      121 lsssvltqmn ageqativqq tsdwveidfh ntrgfvskqy isvsessvss pspeaaavss
      181 feiavdalnv rtkpdlnsdv kdlvrkgkvf piksmegnwv eielsandsg wvyafhghls
      241 dqsanavsgt dtevvtvltd gtnlrskpst ssevvsrtna gerlsvigqd gdwykvslpg
      301 gqdayiatwv vtsgetetvq qekkekpdrk agtldgltiv idpghggndg gtvgarytee
      361 kdltlktaet lthhlrsaga evvltrqsdv yvdlrkrvst ghqvaadafi slhydatnds
      421 svsgfttyyl hdyqeplaey inaglgkkid lrdrgvqpgn ylvlrenrqp avlvelgfls
      481 nynderivst gkfrdqaalg lyngiiqyfd aqlee
//
LOCUS       WP_235199123             315 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Planococcus sp. 107-1].
ACCESSION   WP_235199123
VERSION     WP_235199123.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 315)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 315)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..315
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=35932
     Region          3..237
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(64,66,68..69,161..162,180,228)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 msihkiiipt pfavgdvnsy llkgdaltli dagpktpeaw eaikaglkev nlrpqdieqv
       61 vlthhhpdha gwvdgfenak lyghpyndlw lrrdeaffqy hdafymerlk eegvpddley
      121 wvkkmkrpln lmgsrpldms inegdvlpgh eewkvmetlg haqshlsfwn aetsemiggd
      181 hviakvssnp lieppldpdq grpksllqyn eslgrllkmp ieviysghge evrnmkelit
      241 arlekqhlra mkvlnmiehe ektvymlake lfphayvkel gltlsetigq idylledgli
      301 terldgdglf yyqka
//
LOCUS       WP_235199124             183 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3221 domain-containing protein [Planococcus sp. 107-1].
ACCESSION   WP_235199124
VERSION     WP_235199124.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022953.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11518.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..183
                     /product="DUF3221 domain-containing protein"
                     /calculated_mol_wt=20337
     Region          45..116
                     /region_name="DUF3221"
                     /note="Protein of unknown function (DUF3221); pfam11518"
                     /db_xref="CDD:431915"
ORIGIN      
        1 mkkftmlmas llflaacsnd eeakpkveep kkeevateqq emteegfitq vtadqilvnn
       61 iyftipeevs ikhddgkeqk dgvisdirtg mkvvvdykgp ladsfpmegk aetvsiqede
      121 asleeakalt afiegeklpr llmlgqpivr eneigflftn mengkmsevk idldtheyti
      181 gge
//
LOCUS       WP_235199136             284 aa            linear   BCT 02-MAR-2025
DEFINITION  site-specific integrase [Planococcus sp. 107-1].
ACCESSION   WP_235199136
VERSION     WP_235199136.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 284)
  AUTHORS   Subramanya,H.S., Arciszewska,L.K., Baker,R.A., Bird,L.E.,
            Sherratt,D.J. and Wigley,D.B.
  TITLE     Crystal structure of the site-specific recombinase, XerD
  JOURNAL   EMBO J 16 (17), 5178-5187 (1997)
   PUBMED   9311978
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014898.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02899.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..284
                     /product="site-specific integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=32882
     Region          6..264
                     /region_name="XerD"
                     /note="Site-specific recombinase XerD [Replication,
                     recombination and repair]; COG4974"
                     /db_xref="CDD:443999"
ORIGIN      
        1 mpygyekfrl kngispntvv hevqliralf aflrntykkp vepheirpid iqkflqqqhe
       61 tgikdstlnr kliyirlwfd ymwqigkipv dfmpkfkfae kldltpadih vnygellekk
      121 dsvlessqls lnakilfily mrglrlrdmt tievddfedv dgglllplek kdgyvcqlef
      181 sgkeipvlme gieravfrnt pyllsskvkd gysmfkmgsl sdytealtdf lgvpirsgdl
      241 rfayvhhlyt vehknleeiq eimgvsldsa srmltesltr lkqd
//
LOCUS       WP_235199147             236 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Planococcus sp. 107-1].
ACCESSION   WP_235199147
VERSION     WP_235199147.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 236)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..236
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=26201
     Region          5..231
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(5,11,20,23..24,27,29..30,54,60,71..72,75,82..91,94,
                     101..109,111,113,116,119..120,123..124)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381152"
ORIGIN      
        1 mkpnihvlii eddfrvagin qelvdqiegf hveaiaktgd eaiaflqqad plpdlvlldv
       61 yipdrsglsl fweirsaypk adilmlsaat dagtieqtmr ggifdylikp vdfnrfqesl
      121 lryrdqktff asktdlkqsd idrlfgrqqs giskeaaqee dlpkgidalt lsdvlevlts
      181 spapgvname tgkavgvsrs tarrylehlv stgdakaqln ygeigrperr yipwtk
//
LOCUS       WP_235199153             313 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Planococcus sp.
            107-1].
ACCESSION   WP_235199153
VERSION     WP_235199153.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 313)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 313)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 313)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 313)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..313
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=33978
     Region          <2..308
                     /region_name="UvrA"
                     /note="Excinuclease UvrABC ATPase subunit [Replication,
                     recombination and repair]; COG0178"
                     /db_xref="CDD:439948"
ORIGIN      
        1 mkhidvsfpi gcfiavtgvs gsgkstllfd llassaeknh qkagyekitg mefiqrmvtv
       61 dqsalsrmqr sniatytdiy tglrnlyanl paakeqqlta khfsfntegg rcehcqglgy
      121 vfvnmhflpd levvcpvcsg krfkvevlav hyegqsisdv ldlsieeslp lfqgqkkivs
      181 tiklllevgl gylkwgqtlt tlsggegqrl klakelnkav kgptlyilde pssglhpndv
      241 kqllllvnkl vdaghtviiv ehntemiqes dwvidmgpeg geaggevvat gtpeqiaanp
      301 tsftgnflnv qpl
//
LOCUS       WP_235199162             168 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Planococcus sp. 107-1].
ACCESSION   WP_235199162
VERSION     WP_235199162.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024635.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13238.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..168
                     /product="AAA family ATPase"
                     /calculated_mol_wt=19525
     Region          1..>101
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 mkiyitgsvg sgkttlakrl aaelgllhfe tdnfvwkrap ggdirnseeq rnahlaealm
       61 qpqwivegvh idwtdaaidq adwiifldlp lkerkrriik rffkqlagve sanykpkfkm
      121 lqkmftwnry yedkmkpefl kkfqvypnkt iisnsseaal ttifekri
//
LOCUS       WP_235199384             172 aa            linear   BCT 02-MAR-2025
DEFINITION  tail fiber assembly protein [Salmonella enterica].
ACCESSION   WP_235199384
VERSION     WP_235199384.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Pell,L.G., Kanelis,V., Donaldson,L.W., Howell,P.L. and
            Davidson,A.R.
  TITLE     The phage lambda major tail protein structure reveals a common
            evolution for long-tailed phages and the type VI bacterial
            secretion system
  JOURNAL   Proc Natl Acad Sci U S A 106 (11), 4160-4165 (2009)
   PUBMED   19251647
REFERENCE   2  (residues 1 to 172)
  AUTHORS   Wang,J., Hofnung,M. and Charbit,A.
  TITLE     The C-terminal portion of the tail fiber protein of bacteriophage
            lambda is responsible for binding to LamB, its receptor at the
            surface of Escherichia coli K-12
  JOURNAL   J Bacteriol 182 (2), 508-512 (2000)
   PUBMED   10629200
REFERENCE   3  (residues 1 to 172)
  AUTHORS   Haggard-Ljungquist,E., Halling,C. and Calendar,R.
  TITLE     DNA sequences of the tail fiber genes of bacteriophage P2: evidence
            for horizontal transfer of tail fiber genes among unrelated
            bacteriophages
  JOURNAL   J Bacteriol 174 (5), 1462-1477 (1992)
   PUBMED   1531648
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014467.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02413.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         1..172
                     /product="tail fiber assembly protein"
                     /calculated_mol_wt=19399
     Region          68..172
                     /region_name="Caudo_TAP"
                     /note="Caudovirales tail fibre assembly protein, lambda
                     gpK; cl17077"
                     /db_xref="CDD:450149"
ORIGIN      
        1 melknvnryi pddpdydsnf lyfrsedgqd fyeslskftk kyklcidsdn iirsvsedvs
       61 rlypagfsvv evnklpagfn iygdwkysng tvlavpvdyq akaettrqkl ldaanstiad
      121 wrtelalgei ndddkasltk wmayiralkt ldlsgvkdaa tftairwpal pq
//
LOCUS       WP_235199450             827 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 9 protein [Sphingomonas sp. RIT328].
ACCESSION   WP_235199450
VERSION     WP_235199450.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas sp. RIT328
  ORGANISM  Sphingomonas sp. RIT328
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012961.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00759.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Sphingomonas sp. RIT328"
                     /db_xref="taxon:1470591"
     Protein         1..827
                     /product="glycoside hydrolase family 9 protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=89604
     Region          262..349
                     /region_name="E_set_Cellulase_N"
                     /note="N-terminal Early set domain associated with the
                     catalytic domain of cellulase; cd02850"
                     /db_xref="CDD:199881"
ORIGIN      
        1 mtrwnrtlll gvasaamlvg ighaqtltvt paetletqgl tvivdqnhfs piffdeknag
       61 iqmvlhgeri atdgavrldr tpeqwapvpe fvsrslgnep nqvvvrsafk qqqlaysvkv
      121 taepggfria vdldqplpaa lagkagfnld flpsayfgkt yltdtapglf prhptgpmak
      181 dgsgdplplg satkaitlsp edpltrvsit sdtgrldlyd araraqngwf vvrsliapga
      241 qkdavvwhvr pnvvknwtrd pvvsfnqagy tpgrakvali eldpnfkapa eaelvrltad
      301 gtqsvlrart qtrghwtryd yaafdfssvr epglyairya grttnpfria pdayqrlwqt
      361 sldtfiaeqm dhvgireqyr vwsspshldd arqappnith fdgykmgpnl dspfkagehi
      421 pglavggwqd agdydiqtpe naavtrdlvw arelfgldwd etsideaark veirrpdgie
      481 davqqirhgt lqllaqykvf ghaivgivdp slrqyahlgd agsqtdnrly daklgkdeir
      541 gnasgtpddr wafttdlpan nlavagglaa asralagsdp kmagealaaa kvlwskqqgg
      601 vvkagdgrdd sssprsaeaa nvvatvelll ttrdrvyadr lrqlqpviaq nfpwlagaav
      661 raiplmdany raalvplvqd mkakadgpmt anpfgvpisd gswagsnqvv sfgttmyllh
      721 kafpeivgta ytlnaidyvl grhpannlsl vstvgtaskl igyghnrady sfipggmvpg
      781 vlivkpdype aktdwpflwf eneytvstts ayilaaraaa vvaaetq
//
LOCUS       WP_235199452             999 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase family 28-related protein [Sphingomonas sp.
            RIT328].
ACCESSION   WP_235199452
VERSION     WP_235199452.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas sp. RIT328
  ORGANISM  Sphingomonas sp. RIT328
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 999)
  AUTHORS   Itoh,T., Panti,N., Hayashi,J., Toyotake,Y., Matsui,D., Yano,S.,
            Wakayama,M. and Hibi,T.
  TITLE     Crystal structure of the catalytic unit of thermostable GH87
            alpha-1,3-glucanase from Streptomyces thermodiastaticus strain
            HF3-3
  JOURNAL   Biochem Biophys Res Commun 533 (4), 1170-1176 (2020)
   PUBMED   33041007
REFERENCE   2  (residues 1 to 999)
  AUTHORS   Chen,D., Li,G., Liu,J., Wisniewski,M., Droby,S., Levin,E., Huang,S.
            and Liu,Y.
  TITLE     Multiple transcriptomic analyses and characterization of
            pathogen-related core effectors and LysM family members reveal
            their differential roles in fungal growth and pathogenicity in
            Penicillium expansum
  JOURNAL   Mol Genet Genomics 295 (6), 1415-1429 (2020)
   PUBMED   32656702
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024120.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12708.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Sphingomonas sp. RIT328"
                     /db_xref="taxon:1470591"
     Protein         1..999
                     /product="glycosyl hydrolase family 28-related protein"
                     /calculated_mol_wt=106994
     Region          41..>430
                     /region_name="GH55-like"
                     /note="glycoside hydrolase family 55 (GH55) family domains
                     and similar proteins; cl49631"
                     /db_xref="CDD:483971"
     Region          <385..663
                     /region_name="GH55-like"
                     /note="glycoside hydrolase family 55 (GH55) family domains
                     and similar proteins; cl49631"
                     /db_xref="CDD:483971"
     Region          719..999
                     /region_name="YvrE"
                     /note="Sugar lactone lactonase YvrE [Carbohydrate
                     transport and metabolism]; COG3386"
                     /db_xref="CDD:442613"
ORIGIN      
        1 mkhiwllgaa alvapapava attsvyltap kderaitvrg vgdgraddsa aiqqaidaaa
       61 esgkggvvfl psgryrvsrt ifvrsavrif gvgatrpeiv lgdnsagfge gvaamlaftg
      121 edqyrvgkap vpprtsvpfd paifdatsst fysaisnvdf rigagnagav avrfrvaqhg
      181 yirhadfhig sglagvyqag nefedlrffg grygimsekt spawqftlid sdfsgqrdaa
      241 irehevdltl vnvairdtpv gieidrgysd slwgkdvrfe nvsqtavlis eeksvftqig
      301 fdnaigintp tfarfrdsga tvagkgaryr vsdfsyglkl aglgtigdya tdvtmaplar
      361 vparprpaia alppvkawan ahdlgvrgdd ttddtaalqr aidthrvvyl pmgryrvtdt
      421 irlrpdsvli alhpslthvy lpdetpafmg vgsakalies akggnaivhg lglwtggvnp
      481 ratallwkag ersmvndvki qggggtvltk gspigfgdpr arfdgqypsi wvtdggggtf
      541 aalwspntla sagfyvsntk tpghvyelsa ehhyrheivl dhvenwefla pqteqevrdg
      601 vnavstefrn srnilfanyh gyrvtrtikp mdtavrlyns geirfrnvhv naesgfascd
      661 akgcgtytra skfpfenaik dmtrqqevrd refarldvpa apasaatapa ipvsagvrkl
      721 adgfysiaga atdangklyf idrffqrihg wsageglttv sdapldpvnl avdrsgsllv
      781 lssagrdgsv ysidprdpaa vrvipptpvr agrkaatllp vnvwangefa dridpktysy
      841 pplsafftgk mgeakaqeyv spdgslvlpa frvwnqgpdd hqgwrwsdtl dsygfvaapq
      901 ggrvtltngs enrtysglvg eggqvtdlkv vadrggesva rdaagnlyva ngqvfvyapd
      961 gtqtrridvp erplqlvigg agqktlfilt hhalyavel
//
LOCUS       WP_235199480             678 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Photobacterium carnosum].
ACCESSION   WP_235199480
VERSION     WP_235199480.1
KEYWORDS    RefSeq.
SOURCE      Photobacterium carnosum
  ORGANISM  Photobacterium carnosum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
REFERENCE   1  (residues 1 to 678)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Photobacterium carnosum"
                     /db_xref="taxon:2023717"
     Protein         1..678
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=76282
     Region          1..385
                     /region_name="CelB"
                     /note="Phosphotransferase system cellobiose-specific
                     component IIC [Carbohydrate transport and metabolism];
                     COG1455"
                     /db_xref="CDD:441064"
     Region          432..661
                     /region_name="EAL"
                     /note="EAL domain. This domain is found in diverse
                     bacterial signaling proteins. It is called EAL after its
                     conserved residues and is also known as domain of unknown
                     function 2 (DUF2). The EAL domain has been shown to
                     stimulate degradation of a second...; cd01948"
                     /db_xref="CDD:238923"
ORIGIN      
        1 msqlsvnkyl vavsnvflma lplvlistfc elialfcdyf dfsdfgqtvh yvgqttrvmi
       61 pilvnfylat ylsavkripk giviatsltv ffiisyqwdl ispliplpns fpmslltayi
      121 sceviaklrk irlfkgktdq sfidismsml agsivtisia lsisflfrki feqlsslipw
      181 sfiprldpts fidgliyevl rglfwaigin ghhilhsykt dlynitlvni tewhnfginl
      241 nilstnfydf ftgiggsgnm lslvlcmlff akskgyklla ktalilclfn vnepilygip
      301 vifnpimiip fllvpsvsfi iaygamyvgl vpplsevhsw lmppflsgym atggaisgav
      361 lqlllvligi viylpffklm dkrslgigvs difsnrlfts deiesktrlt sfipslhnnl
      421 raqkkieklq gdgefilyyq pqvdiennci vgcealirfr nhqgkilppt fisdfnqlgl
      481 mpeldlwvld naikaaekfi iinpkfkisi nispdtillk nfasivieri nnsslsfhhv
      541 elefteelli ldedkvakim telqtlgisi alddfgtgys slaylsrfef dkvkidrslv
      601 lninsqrgke lfkiavqlgk itqadiiveg vekqqeldfi aslgvryiqg fyfykpmaen
      661 elfqrgllks kqcevadn
//
LOCUS       WP_235199504             132 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Sphingomonas sp. RIT328].
ACCESSION   WP_235199504
VERSION     WP_235199504.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas sp. RIT328
  ORGANISM  Sphingomonas sp. RIT328
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Sphingomonas sp. RIT328"
                     /db_xref="taxon:1470591"
     Protein         1..132
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=14361
     Region          3..128
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 meprvgcgaa ivadgrilll rrrrppesgh wglaggkvdl fepaeaamrr evaeelgivv
       61 gavewlcfvd qidraagthw vapiyrvldf tgiprncepd khdgpqwfal dalpealttp
      121 traalaalrr ve
//
LOCUS       WP_235199160             210 aa            linear   BCT 02-MAR-2025
DEFINITION  YIP1 family protein [Planococcus sp. 107-1].
ACCESSION   WP_235199160
VERSION     WP_235199160.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. 107-1
  ORGANISM  Planococcus sp. 107-1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 210)
  AUTHORS   Yang,X., Matern,H.T. and Gallwitz,D.
  TITLE     Specific binding to a novel and essential Golgi membrane protein
            (Yip1p) functionally links the transport GTPases Ypt1p and Ypt31p
  JOURNAL   EMBO J 17 (17), 4954-4963 (1998)
   PUBMED   9724632
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016764.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04893.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Planococcus sp. 107-1"
                     /db_xref="taxon:2908840"
     Protein         1..210
                     /product="YIP1 family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=23552
ORIGIN      
        1 mdelekeqql npftaiwlnt reairwvlat kawpyfffll ylagisvgfi slsqsamlel
       61 plepallfaf vispvlllia aafmsalylw fgkimkgsaa yiaifkavit glipqiwllp
      121 liflfliiap eiflsqtpke gpfrlflyaa yflivlatsl wsiviqskai aeahrmatwk
      181 gfltflvpsa vmwgimtyvi illvfalagf
//
LOCUS       WP_235199544             229 aa            linear   BCT 02-MAR-2025
DEFINITION  MOSC domain-containing protein [Photobacterium galatheae].
ACCESSION   WP_235199544
VERSION     WP_235199544.1
KEYWORDS    RefSeq.
SOURCE      Photobacterium galatheae
  ORGANISM  Photobacterium galatheae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Anantharaman,V. and Aravind,L.
  TITLE     MOSC domains: ancient, predicted sulfur-carrier domains, present in
            diverse metal-sulfur cluster biosynthesis proteins including
            Molybdenum cofactor sulfurases
  JOURNAL   FEMS Microbiol Lett 207 (1), 55-61 (2002)
   PUBMED   11886751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015438.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03473.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Photobacterium galatheae"
                     /db_xref="taxon:1654360"
     Protein         1..229
                     /product="MOSC domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030151 - molybdenum ion binding
                     [Evidence IEA]"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /calculated_mol_wt=26316
     Region          14..227
                     /region_name="PRK11536"
                     /note="6-N-hydroxylaminopurine resistance protein;
                     Provisional"
                     /db_xref="CDD:183182"
ORIGIN      
        1 minpetslll qglyagkvaq hfgittamvk qpvmgqmyls etglaedeca evrfhggker
       61 alhqypqehy afwqqqyper ewvspsmgen lsslgmtedn vrigdryrwg eaiieisqpr
      121 spcfkmnarw dlqgfsevmq tsgrcgwlyr viqpgyvsae eplvliqagd erftvkqvld
      181 wyfndpmnvd klrllqscra lsekwrgtig krletgelen wqfrlkgka
//
LOCUS       WP_235199558             201 aa            linear   BCT 02-MAR-2025
DEFINITION  prepilin-type N-terminal cleavage/methylation domain-containing
            protein [Photobacterium galatheae].
ACCESSION   WP_235199558
VERSION     WP_235199558.1
KEYWORDS    RefSeq.
SOURCE      Photobacterium galatheae
  ORGANISM  Photobacterium galatheae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019575.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07963.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Photobacterium galatheae"
                     /db_xref="taxon:1654360"
     Protein         1..201
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /calculated_mol_wt=21870
ORIGIN      
        1 mmlkfsnrqt gltlielviv ivvvsllsmv aipryldiad eakiaalqgv agsfsaavis
       61 araqweadgk psqqrlnwvn ydgtrfsltt sksghregyp falvtlsrrp lsalsdqdcl
      121 dlidnllqsp ppatpdenea asgqyqyfvr aevvsghqlc ryyqlasasd fgtgmksita
      181 ghsfiytpal grvdmkiehn n
//
LOCUS       WP_235199567             332 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Photobacterium galatheae].
ACCESSION   WP_235199567
VERSION     WP_235199567.1
KEYWORDS    RefSeq.
SOURCE      Photobacterium galatheae
  ORGANISM  Photobacterium galatheae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
REFERENCE   1  (residues 1 to 332)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Photobacterium galatheae"
                     /db_xref="taxon:1654360"
     Protein         1..332
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=37138
     Region          2..313
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 mepnfsenma gpvaecwaqr hqgqfegvsg vpiawmsltg fnpdkaivlv ngrietfhky
       61 qelcweltrq gydvftldhr gqgcsgrmtp dtqlghveef sdyvadlhtf vetvvkpagy
      121 rqhfilghsm ggtvvslyla qhpdffdaaa lsapmhgiki shwmkpiasp larvaeqlqr
      181 qpsyapgqvp yypkpfadnp lsqsrcrydw frqlyeenpn fklggpssrw vwqalaaarq
      241 tvelasqihc pilllqnsed tivdnraqnv fcqrvqqggg hchlkviqga rhevlfeqdr
      301 frspaieail thfthesmgn aepplaansq ag
//
LOCUS       WP_235199658             132 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2170 family protein [Photobacterium galatheae].
ACCESSION   WP_235199658
VERSION     WP_235199658.1
KEYWORDS    RefSeq.
SOURCE      Photobacterium galatheae
  ORGANISM  Photobacterium galatheae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021457.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09938.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Photobacterium galatheae"
                     /db_xref="taxon:1654360"
     Protein         1..132
                     /product="DUF2170 family protein"
                     /calculated_mol_wt=14666
     Region          2..127
                     /region_name="DUF2170"
                     /note="Uncharacterized protein conserved in bacteria
                     (DUF2170); cl01551"
                     /db_xref="CDD:470249"
ORIGIN      
        1 mwqlsdlapl lsehdgwqve lqgqallirn ednieaflav sgeqilvevv lfdaaqvkdt
       61 dalnaeilrt hkmfplstig lnningndyy iafgslssqs kaesvvieva tlfrnveafi
      121 dlyqdyfkeq ta
//
LOCUS       WP_235199663             545 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5597 domain-containing protein [Sphingomonas sp. RIT328].
ACCESSION   WP_235199663
VERSION     WP_235199663.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas sp. RIT328
  ORGANISM  Sphingomonas sp. RIT328
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 545)
  AUTHORS   Larsbrink,J., Thompson,A.J., Lundqvist,M., Gardner,J.G.,
            Davies,G.J. and Brumer,H.
  TITLE     A complex gene locus enables xyloglucan utilization in the model
            saprophyte Cellvibrio japonicus
  JOURNAL   Mol Microbiol 94 (2), 418-433 (2014)
   PUBMED   25171165
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037199.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18120.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Sphingomonas sp. RIT328"
                     /db_xref="taxon:1470591"
     Protein         1..545
                     /product="DUF5597 domain-containing protein"
                     /calculated_mol_wt=59047
     Region          62..>217
                     /region_name="GanA"
                     /note="Beta-galactosidase GanA [Carbohydrate transport and
                     metabolism]; COG1874"
                     /db_xref="CDD:441478"
     Region          404..532
                     /region_name="DUF5597"
                     /note="Domain of unknown function (DUF5597); pfam18120"
                     /db_xref="CDD:465657"
ORIGIN      
        1 mmgrtarwla apllatmlag qpvaaqtaap lpkiiardgr hallvdgapf lmlgiqanns
       61 snyagmlpkv wpmverihan tleipvaweq vepvegqfdf syvdallaga rthdtrlvll
      121 wfgtwkntgp sytpawvksd prrfprmrka dgsthptftp harttleadk rafvalmqhl
      181 kandpdhrvi mvqvenetgv ygqnrdlspt aqalfrqpvp aalakttgkr gdwttvygkl
      241 aeaafngwyv aryvdeiaaa gravldlpmy anaavgspfa tpgedggasg gpnwtiidvw
      301 kaaaphldvv apdlynadpk tyaaflklyg rpdnalmipe tgnavayary lwpvlghggi
      361 gfspfgfddt gyvnyplgsk vidaatvaaf gdkfalmapn argwakmsla hptwgsakpa
      421 dasdetgtmg rwtitaqygq wqfgdrdsqw lksdpnptrd qpvggvavaq lgpdqfllag
      481 sdvrvkfdra savkgensqy lsveegslda agtwttlrvw ngdqtdygln ltkptllrvt
      541 lgtyr
//
LOCUS       WP_235199699             273 aa            linear   BCT 02-MAR-2025
DEFINITION  TolC family protein [Sphingomonas sp. RIT328].
ACCESSION   WP_235199699
VERSION     WP_235199699.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas sp. RIT328
  ORGANISM  Sphingomonas sp. RIT328
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 273)
  AUTHORS   Johnson,J.M. and Church,G.M.
  TITLE     Alignment and structure prediction of divergent protein families:
            periplasmic and outer membrane proteins of bacterial efflux pumps
  JOURNAL   J Mol Biol 287 (3), 695-715 (1999)
   PUBMED   10092468
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02321.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Sphingomonas sp. RIT328"
                     /db_xref="taxon:1470591"
     Protein         1..273
                     /product="TolC family protein"
                     /GO_function="GO:0015562 - efflux transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=28653
     Region          <21..259
                     /region_name="PRK09837"
                     /note="Cu(I)/Ag(I) efflux RND transporter outer membrane
                     protein"
                     /db_xref="CDD:182103"
ORIGIN      
        1 mtlnrdlhdq glvsgadvad aetvlaqaqs dvasyttqva qdqnalellv ghrladdalp
       61 aslaeldtgi atpgaglssa vllsrpdvve aehqlraahy digaaraaff ptisltsllg
      121 fastaltslf sggaslwsgs asasvpllgg tnrgnlayae aqrdyyfaty rkaaqsayrd
      181 vadalarrgt idrqrqaqqr lvtaadrsya iadaryregv dsfltalvaq gtlyaarqtq
      241 tatmladlsn rialyqaiga detlanagem ahr
//
LOCUS       WP_235199727             431 aa            linear   BCT 02-MAR-2025
DEFINITION  TolC family protein [Sphingomonas sp. RIT328].
ACCESSION   WP_235199727
VERSION     WP_235199727.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas sp. RIT328
  ORGANISM  Sphingomonas sp. RIT328
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 431)
  AUTHORS   Johnson,J.M. and Church,G.M.
  TITLE     Alignment and structure prediction of divergent protein families:
            periplasmic and outer membrane proteins of bacterial efflux pumps
  JOURNAL   J Mol Biol 287 (3), 695-715 (1999)
   PUBMED   10092468
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02321.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Sphingomonas sp. RIT328"
                     /db_xref="taxon:1470591"
     Protein         1..431
                     /product="TolC family protein"
                     /GO_function="GO:0015562 - efflux transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45460
     Region          28..426
                     /region_name="tolC"
                     /note="outer membrane channel protein; Reviewed; cl30340"
                     /db_xref="CDD:357216"
ORIGIN      
        1 mrsmrvlvgm aaagllvgaa graasgdalt leaaardava whpsvieaag tlaasdadva
       61 aaragyrptl saglgsgyds rvsgtwrprp qfgasqmlyd fgkvssdvaa aragtrvsra
      121 elllavdtli rdtayaiiel qrasaqrlia qdqlariaei snlvgqrstm gaatqsdalq
      181 aqarveaaqa sltqveaeer rwtsnlvfll ghplppagva sdvpgwldqg cagpppawqg
      241 vpaiaaadaq teraaaelrr sradryptls lggdastdvg spfgdrsiyn fglrvssnif
      301 aggltkarvr sagfrlaaae agarrvrnes saqlaeaqqq idslsrlaat lgsretnmre
      361 tgrlyriqyl emgtrtlvdl lnaeqelqqv rfdavnttqn lrrlhidclf tagrmrdafg
      421 lagtairgvt l
//
LOCUS       WP_235199770             428 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Sphingomonas sp.
            RIT328].
ACCESSION   WP_235199770
VERSION     WP_235199770.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas sp. RIT328
  ORGANISM  Sphingomonas sp. RIT328
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 428)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Sphingomonas sp. RIT328"
                     /db_xref="taxon:1470591"
     Protein         1..428
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=46362
     Region          <84..400
                     /region_name="CirA"
                     /note="Outer membrane receptor protein, Fe transport
                     [Inorganic ion transport and metabolism]; COG1629"
                     /db_xref="CDD:441236"
ORIGIN      
        1 mqaqyraiqt dfystqgdls vtrkldtgfg thdirvgsyg slwgqtmfta yqnyliqvks
       61 qprvldlaay aasgavlgyv tdhgslndav slnagnvdgq lialygtdsw ditdrlrlda
      121 gfrhewysys gydrltgayn fgdpttladn ntrgftgaig tlrlkqqatn wtvggnydls
      181 rhigmylras qldvpqntti aftyptpavv ptkaklyeag vklaaggsyl yvtgfytkfd
      241 plnasfagfn patgradvtt tfigtaetkg meadgrlrlp gpfslagsvt vqhprylnfs
      301 sntgldgsra ngkqivrepr lflnvrptad vafgatkvsl ygrydyvgrr ytdffnstal
      361 paygsfglgg ivsdgawqvq vvgdnitnah gftegntagd rfgqgvptai fgrplfgrnv
      421 rlivsrsw
//
LOCUS       WP_235199690             133 aa            linear   BCT 02-MAR-2025
DEFINITION  RNA 3'-terminal phosphate cyclase [Sphingomonas sp. RIT328].
ACCESSION   WP_235199690
VERSION     WP_235199690.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas sp. RIT328
  ORGANISM  Sphingomonas sp. RIT328
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 133)
  AUTHORS   Palm,G.J., Billy,E., Filipowicz,W. and Wlodawer,A.
  TITLE     Crystal structure of RNA 3'-terminal phosphate cyclase, a
            ubiquitous enzyme with unusual topology
  JOURNAL   Structure 8 (1), 13-23 (2000)
   PUBMED   10673421
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013317.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01137.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Sphingomonas sp. RIT328"
                     /db_xref="taxon:1470591"
     Protein         1..133
                     /product="RNA 3'-terminal phosphate cyclase"
                     /calculated_mol_wt=13662
     Region          1..>123
                     /region_name="RCL1"
                     /note="RNA 3'-terminal phosphate cyclase [RNA processing
                     and modification]; COG0430"
                     /db_xref="CDD:440199"
ORIGIN      
        1 mitidgsege gggqvvrnar alslvtgtpf rivnvrggre kpglmrqhvt aieaacaigr
       61 ggacegvavg areitfrpgt vdageyrfav gtagstglvl qtvlmpllla ngpsrlvleg
      121 gthttcwrhh stl
//
LOCUS       WP_235199863             313 aa            linear   BCT 02-MAR-2025
DEFINITION  TniB family NTP-binding protein [Pseudomonas monteilii].
ACCESSION   WP_235199863
VERSION     WP_235199863.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas monteilii
  ORGANISM  Pseudomonas monteilii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 313)
  AUTHORS   Kholodii,G.Y., Mindlin,S.Z., Bass,I.A., Yurieva,O.V.,
            Minakhina,S.V. and Nikiforov,V.G.
  TITLE     Four genes, two ends, and a res region are involved in
            transposition of Tn5053: a paradigm for a novel family of
            transposons carrying either a mer operon or an integron
  JOURNAL   Mol Microbiol 17 (6), 1189-1200 (1995)
   PUBMED   8594337
REFERENCE   2  (residues 1 to 313)
  AUTHORS   Radstrom,P., Skold,O., Swedberg,G., Flensburg,J., Roy,P.H. and
            Sundstrom,L.
  TITLE     Transposon Tn5090 of plasmid R751, which carries an integron, is
            related to Tn7, Mu, and the retroelements
  JOURNAL   J Bacteriol 176 (11), 3257-3268 (1994)
   PUBMED   8195081
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05621.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Pseudomonas monteilii"
                     /db_xref="taxon:76759"
     Protein         1..313
                     /product="TniB family NTP-binding protein"
                     /calculated_mol_wt=35253
ORIGIN      
        1 mkadherlle qtteermisc mrdvfimrpe amiamgsykr lvalprlidn pcmsitaksg
       61 qgkstigavm aqqscapnsd warkvvyidl vrntanlnlt kllqmeigiq fgerkkpltl
      121 syndiargqr lirennvggv vldeaqlllk gftdrgreln lsavkgfagp ywalnfclla
      181 dkenletllk addtiasrfs lrsahlpelk cdksfiafvk gfvakmplrq ksiidfdfck
      241 kllelsvlkv yrdgveekys plrsvvtilk easrmaiesg leyinlqsls ladlvlrnqm
      301 dtqsyldryt viq
//
LOCUS       WP_235199921             296 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6708 domain-containing protein [Pseudomonas monteilii].
ACCESSION   WP_235199921
VERSION     WP_235199921.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas monteilii
  ORGANISM  Pseudomonas monteilii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042867.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20455.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Pseudomonas monteilii"
                     /db_xref="taxon:76759"
     Protein         1..296
                     /product="DUF6708 domain-containing protein"
                     /calculated_mol_wt=34037
ORIGIN      
        1 matfwifnsl sdsghnpair vqlanisdnt lclrnpwvtd svfmgklyca mtitllmgty
       61 pylypsfldi ynediillil flitpfvftp flayriffik glsticlnrs tqkiyyqrls
      121 kvfvfewsnt ggglfkrtes ggssfstsya lafaprrvdg slhqkdclwv dsneptepdv
      181 rhvaevweyl rhfmahgpdk lpppgepnww hkplhaiclt pteawrhyap wrtgepgemq
      241 gkknwqlpfw avlfpynltv aicwygicrl fnvraapppp aafeeaparl nkrkrk
//
LOCUS       WP_235199932             967 aa            linear   BCT 02-MAR-2025
DEFINITION  2Fe-2S iron-sulfur cluster-binding protein [Pseudomonas monteilii].
ACCESSION   WP_235199932
VERSION     WP_235199932.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas monteilii
  ORGANISM  Pseudomonas monteilii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024900.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13510.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..967
                     /organism="Pseudomonas monteilii"
                     /db_xref="taxon:76759"
     Protein         1..967
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /calculated_mol_wt=105258
     Region          12..965
                     /region_name="gcvT"
                     /note="glycine cleavage system aminomethyltransferase
                     GcvT; cl39066"
                     /db_xref="CDD:476863"
ORIGIN      
        1 mnshtrlpap mgllidrerp vrfqfdgqac egfagdtias allgngrwll srsfkyhrpr
       61 gplsmagqda ntlvqlpeep nvladleavr egqvvegqnf ngslqhdrda ylgkfsrfmp
      121 vgfyyrsfyk pkgmwkvwep lirkkaglgv ldlgfkphyy dkaylfvdva vigagpaglr
      181 aaldaanaga kvllieqqpv lggsltyarf diagtraasl rqellaaveg hpniqvllea
      241 tcngwftdny lpiiqhkrly kvratrclva agsfdqpvvf rnndlpgvml tsaaqrlmkl
      301 yavkpgqrav iltghddgyl aaldlqeqgv avgavvdmra apadaalaae lkrrdipvhl
      361 gstvyealhe agmrhvsgvd irpitgqgkv gphglrlacd llcmsagymp vyqllcqagg
      421 klaydvnrde faishlpagl diagsvngrh alanvladat rgaadavtal glqapalsaf
      481 gaeakvnfpw pifphpkgkd fvdfdedlqv rdivnatrsg yrdvqlvkrf stvgmgpsqg
      541 rhsalptarl vaqatgrsis etgvttarpp fqaeklahva grafdpyrqt pmhrrhlqag
      601 akmmpagiwq rpayygkped rercmqeear hvrekvglid vstlggldvr gpdaaeller
      661 lytfgfakla igrtryalmt nehgvviddg vcarlgeqhf yvtattsgvd riyqqmlkwn
      721 aqwrldvdit nvtaalaavn lagplsrqvl akvchdvels aeafpylgvr qgkvagipar
      781 ilrvgfvgel gyevhvparh aerlwdalmq agaglgirpf gvetqrllrl ekghviisqd
      841 tdgmthpaei dmqwaigrkk pffvgkrsie ileaqplkrk lvgftlpkgs pqpleghlvl
      901 dgpdisgnvt sceysqtlgq iiglayagah qatpgmhipi rveggamvha kvvqlpfhdp
      961 dnlrqel
//
LOCUS       WP_235199940             256 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Pseudomonas monteilii].
ACCESSION   WP_235199940
VERSION     WP_235199940.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas monteilii
  ORGANISM  Pseudomonas monteilii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 256)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 256)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Pseudomonas monteilii"
                     /db_xref="taxon:76759"
     Protein         1..256
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=26905
     Region          13..256
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(17,19..22,44,67..68,96..99,125,151..153,169,173,
                     200..204,206,208..209)
                     /site_type="other"
                     /note="NADP binding site [chemical binding]"
                     /db_xref="CDD:187586"
     Site            order(68,76,119,124,127..129,132,135..136,155..161,167,
                     170..171,174..175,178..179,181..182,185..186,255..256)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187586"
     Site            order(126,153,169,173)
                     /site_type="active"
                     /db_xref="CDD:187586"
ORIGIN      
        1 malipgltgk asvlvcgasr giglalctal larddvsrvw avarhasaad gllalaqahg
       61 ervvlldyda rdelaltala sevgiacthl hlvistlgll hkegakaeks lgqldlaslq
      121 asfatnafap illlkhllpl lrkqpatfaa lsarvgsigd nrlggwysyr askaalnqll
      181 htasielkrv npaatllalh pgttdtelsr pfqgnvpegr lfepafaaqc vieqvgrlgp
      241 aesgsfwgwd gerivw
//
LOCUS       WP_235199775              47 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: aa3-type cytochrome c oxidase subunit IV
            [Sphingomonas].
ACCESSION   WP_235199775
VERSION     WP_235199775.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas
  ORGANISM  Sphingomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae.
REFERENCE   1  (residues 1 to 47)
  AUTHORS   Svensson-Ek,M., Abramson,J., Larsson,G., Tornroth,S., Brzezinski,P.
            and Iwata,S.
  TITLE     The X-ray crystal structures of wild-type and EQ(I-286) mutant
            cytochrome c oxidases from Rhodobacter sphaeroides
  JOURNAL   J Mol Biol 321 (2), 329-339 (2002)
   PUBMED   12144789
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019452.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07835.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..47
                     /organism="Sphingomonas"
                     /db_xref="taxon:13687"
     Protein         1..47
                     /product="aa3-type cytochrome c oxidase subunit IV"
                     /calculated_mol_wt=4998
ORIGIN      
        1 mtdegwmmag ngdlkahest yisvtkmlfw gaiacaviva lviwlia
//
LOCUS       WP_235199947             220 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing protein [Pseudomonas monteilii].
ACCESSION   WP_235199947
VERSION     WP_235199947.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas monteilii
  ORGANISM  Pseudomonas monteilii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 220)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01966.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Pseudomonas monteilii"
                     /db_xref="taxon:76759"
     Protein         1..220
                     /product="HD domain-containing protein"
                     /calculated_mol_wt=23946
     Region          23..211
                     /region_name="HDc"
                     /note="Metal dependent phosphohydrolases with conserved
                     'HD' motif; cl21469"
                     /db_xref="CDD:473873"
ORIGIN      
        1 mtneafapfq hlaadllkhl padhsdsshd lphihrvwvn aqriqhvegg dlevllaavl
       61 lhdcvavekn splrgqastl saqkatsila dmgwptqrid qvahavkths ysagiepftl
      121 earilqdsdr ldaigavgia rcfyvsgrmg aalydfenpt algrdyqdtt yaiehfhtkl
      181 lklasgfktc egarlaaerh arveayladf meevgtggyg
//
LOCUS       WP_235200045             577 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Pseudomonas monteilii].
ACCESSION   WP_235200045
VERSION     WP_235200045.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas monteilii
  ORGANISM  Pseudomonas monteilii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024816.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13424.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Pseudomonas monteilii"
                     /db_xref="taxon:76759"
     Protein         1..577
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=64582
     Region          7..98
                     /region_name="SMEK_N"
                     /note="SMEK domain; NF033859"
                     /db_xref="CDD:411427"
     Region          180..309
                     /region_name="TadD"
                     /note="Flp pilus assembly protein TadD, contains TPR
                     repeats [Intracellular trafficking, secretion, and
                     vesicular transport, Extracellular structures]; COG5010"
                     /db_xref="CDD:444034"
     Region          243..270
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          270..537
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Site            order(280..281,284..285,287,315,318..319,322..323,
                     325..326,349,358..359,362..363,366)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          280..304
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          313..343
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          348..380
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          405..433
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          441..473
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          485..512
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          524..552
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mfernrliae ldayfgvlhy mvaksgkrgr ydlhvhsedf vagilnalhg wklknanekv
       61 snvaavdlid reigvgvqvs sdktsdkvns tikkllkspl rtsinkliif llqskqksyt
      121 infecpgvsf skehiwdydt vvnfasnstt gpelleavha vvvksfgdwp gknwisetsk
      181 aafgarepfp dqtsaesgrl lkrsfedgel ikakvillld kdeafeaqrl ldeyasscta
      241 avaqnfydia slysllksek aevyyarams lepksaakan lyaiglmrqg rfeeaesiyr
      301 ewltdpdlga rdragflgnl gylfknngrf eqsveyfkqs isiaresddl lgviknlngl
      361 gscyinmqey ddarthlnea rdlldeemla cedeatlkty hsikanlltn lgilskykne
      421 pdkarefyrq gidlarsmgd slalyrnygn lansfqgvgd ydrarefgkk ayeiaveled
      481 vrgqcaaltn lgsvdnddek fgsaqgylek allveggnfp klranitanl alsyralgql
      541 dkmqenydea kklyvemglr dslhwlhetf scdtpas
//
LOCUS       WP_235200001             230 aa            linear   BCT 02-MAR-2025
DEFINITION  endonuclease [Pseudomonas monteilii].
ACCESSION   WP_235200001
VERSION     WP_235200001.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas monteilii
  ORGANISM  Pseudomonas monteilii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 230)
  AUTHORS   Jekel,M. and Wackernagel,W.
  TITLE     The periplasmic endonuclease I of Escherichia coli has amino-acid
            sequence homology to the extracellular DNases of Vibrio cholerae
            and Aeromonas hydrophila
  JOURNAL   Gene 154 (1), 55-59 (1995)
   PUBMED   7867949
REFERENCE   2  (residues 1 to 230)
  AUTHORS   Nakamura,A., Koide,Y., Miyazaki,H., Kitamura,A., Masaki,H.,
            Beppu,T. and Uozumi,T.
  TITLE     Gene cloning and characterization of a novel extracellular
            ribonuclease of Bacillus subtilis
  JOURNAL   Eur J Biochem 209 (1), 121-127 (1992)
   PUBMED   1396690
REFERENCE   3  (residues 1 to 230)
  AUTHORS   Focareta,T. and Manning,P.A.
  TITLE     Extracellular proteins of Vibrio cholerae: molecular cloning,
            nucleotide sequence and characterization of the deoxyribonuclease
            (DNase) together with its periplasmic localization in Escherichia
            coli K-12
  JOURNAL   Gene 53 (1), 31-40 (1987)
   PUBMED   3036665
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016146.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04231.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Pseudomonas monteilii"
                     /db_xref="taxon:76759"
     Protein         1..230
                     /product="endonuclease"
                     /GO_function="GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /calculated_mol_wt=26355
     Region          2..221
                     /region_name="HNHc"
                     /note="HNH nucleases; HNH endonuclease signature which is
                     found in viral, prokaryotic, and eukaryotic proteins. The
                     alignment includes members of the large group of homing
                     endonucleases, yeast intron 1 protein, MutS, as well as
                     bacterial colicins, pyocins, and...; cl00083"
                     /db_xref="CDD:469607"
ORIGIN      
        1 mrvsffaaac llltaslaqa daprtfqeak kvawklyarq stefycgcky kgnkvdlasc
       61 gyaprknaqr asriewehiv pawqighqrr cwqdggrkqc sqhdevykra eadlhnlvps
      121 igevngdrsn fsfgwlpeqr gqygscltqv dfkakkvmpr psirgmiart yfymskqynl
      181 rlsrqdrqlf eawnktyppq awerqrnqqv acvmgrgnef vgpvnlkacg
//
LOCUS       WP_235200079            1187 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin cofactor-binding domain-containing protein
            [Pseudomonas monteilii].
ACCESSION   WP_235200079
VERSION     WP_235200079.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas monteilii
  ORGANISM  Pseudomonas monteilii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 1187)
  AUTHORS   Dobbek,H., Gremer,L., Meyer,O. and Huber,R.
  TITLE     Crystal structure and mechanism of CO dehydrogenase, a molybdo
            iron-sulfur flavoprotein containing S-selanylcysteine
  JOURNAL   Proc Natl Acad Sci U S A 96 (16), 8884-8889 (1999)
   PUBMED   10430865
REFERENCE   2  (residues 1 to 1187)
  AUTHORS   Romao,M.J., Archer,M., Moura,I., Moura,J.J., LeGall,J., Engh,R.,
            Schneider,M., Hof,P. and Huber,R.
  TITLE     Crystal structure of the xanthine oxidase-related aldehyde
            oxido-reductase from D. gigas
  JOURNAL   Science 270 (5239), 1170-1176 (1995)
   PUBMED   7502041
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042649.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20256.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1187
                     /organism="Pseudomonas monteilii"
                     /db_xref="taxon:76759"
     Protein         1..1187
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /calculated_mol_wt=127711
     Region          50..>167
                     /region_name="MoCoBD_2"
                     /note="Molybdopterin cofactor-binding domain; pfam20256"
                     /db_xref="CDD:466407"
     Region          182..744
                     /region_name="CoxL"
                     /note="Aldehyde, CO or xanthine dehydrogenase, Mo-binding
                     subunit [Energy production and conversion]; COG1529"
                     /db_xref="CDD:441138"
     Region          807..907
                     /region_name="Cytochrom_C"
                     /note="Cytochrome c; pfam00034"
                     /db_xref="CDD:459641"
     Region          990..1164
                     /region_name="CccA"
                     /note="Cytochrome c, mono- and diheme variants [Energy
                     production and conversion]; COG2010"
                     /db_xref="CDD:441613"
ORIGIN      
        1 mnhsqqvpsr eqllaktgvl livdqitpps gpvakgvtpv vkerelalfi avsddgmvya
       61 fnghvdlgtg irtslaqiva eeldlrmdqv hmvlgdtera pnqgatiasa tlqisavplr
      121 kaaatarrfl lqqaaqrlac apealrieeg aviasngstl sfaelvqgen hqryiaddap
      181 lkaiedyrlv grsaarvdip gkatgeltyv hdmrlpdmlh grvirppyag hdsgdlvgns
      241 llavdetsia hvpgvvavvv irdfvgvvae reeqairaah dlkvswkpft aklpdlsdva
      301 qairdnprvq rtvldkgdvd ggianasqrl srsylwpyql hasigpscal adftegpirv
      361 wsgtqnphll radlawllec aedrieiirm eaagcygrnc addvcadavl lsravqrpvr
      421 vqltreqehv wepkgtaqlm eidgglnadg svaaydfqts ypsngaptla llltgavepv
      481 palfemgdrt sippydyehm rvtindmtpl vraswmrgvs ampnsfahes yidelafaag
      541 vdpveyrlkh lsdpraidli kataeraawq phtqpmqtqa egdvlrgrgf ayaryihskf
      601 pgfgaawaaw vadvavdrrt gevavtrvvi ghdagmmvnp egvrhqihgn viqstsrvlk
      661 eqvsfeestv askewggypi ltfpelpaid vmmlprqhep pmgsgesasv psaaaianai
      721 fdatgirfre lpitaervra alggegqepd aptqehptkk rskwwfgsla gvfgaalgml
      781 atalpwraei apvtppgags wsaamlergr qvaaagdcav chtvsggkvn agglametpf
      841 gtlystnitp dpetgigrws faaferamre gisrdgrhly pafpytsfrn indadmqaly
      901 aylmsqtpvr qaapandmrf pfnqrplmag wnalflqrge yqpdpqrsaq wnrgaylvdg
      961 lghctachsp rnlmgaekgg gsylaggrvd gweapalnal gksatpwsed elftylstgf
     1021 sekhgvaagp mgpvvselat lpksdvraia hylssldgep atlaanaapq adiqvslsng
     1081 ervfkgacla chsdglgpkl lgvspsmavn snvhsdlpdn llrvvlhgip tpatrdlgym
     1141 pgfkdslsdr qvadlaaylr qrfaadkpaw qglaakaahi ranpgsh
//
LOCUS       WP_235200174             336 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4917 family protein [Pseudomonas monteilii].
ACCESSION   WP_235200174
VERSION     WP_235200174.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas monteilii
  ORGANISM  Pseudomonas monteilii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027588.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16263.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Pseudomonas monteilii"
                     /db_xref="taxon:76759"
     Protein         1..336
                     /product="DUF4917 family protein"
                     /calculated_mol_wt=37114
     Region          23..319
                     /region_name="DUF4917"
                     /note="Domain of unknown function (DUF4917); pfam16263"
                     /db_xref="CDD:374458"
ORIGIN      
        1 mpaldatltp wpelaarhpc ealllgngas ravwkpfgyf slfeeaqrag rkkglavsdq
       61 alfkslgtel fepvlsalnt tvranaalai nstaplnryy sikealihav rtvhlpwplm
      121 ppatlatlnq alrgyrsvyt snydlllpwa vqsaphgfad lfdeqgffdv rrtrsegtrv
      181 mhlhgglhll klpdgttrqr sadsaelldg favnipgevp lfvnedrsee klrairhsdy
      241 lswclgqlaq esqglclfgq hldssdqhll eairqarpkq lsiairpvse asvinqkqhf
      301 vdrfgdlsgt qvhfydasth plglpdlaid rpaarr
//
LOCUS       WP_235200177             491 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase HerA-like domain-containing protein [Pseudomonas
            monteilii].
ACCESSION   WP_235200177
VERSION     WP_235200177.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas monteilii
  ORGANISM  Pseudomonas monteilii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 491)
  AUTHORS   Huang,Q., Liu,L., Liu,J., Ni,J., She,Q. and Shen,Y.
  TITLE     Efficient 5'-3' DNA end resection by HerA and NurA is essential for
            cell viability in the crenarchaeon Sulfolobus islandicus
  JOURNAL   BMC Mol Biol 16, 2 (2015)
   PUBMED   25880130
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 491)
  AUTHORS   Rzechorzek,N.J., Blackwood,J.K., Bray,S.M., Maman,J.D.,
            Pellegrini,L. and Robinson,N.P.
  TITLE     Structure of the hexameric HerA ATPase reveals a mechanism of
            translocation-coupled DNA-end processing in archaea
  JOURNAL   Nat Commun 5, 5506 (2014)
   PUBMED   25420454
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 491)
  AUTHORS   Constantinesco,F., Forterre,P., Koonin,E.V., Aravind,L. and Elie,C.
  TITLE     A bipolar DNA helicase gene, herA, clusters with rad50, mre11 and
            nurA genes in thermophilic archaea
  JOURNAL   Nucleic Acids Res 32 (4), 1439-1447 (2004)
   PUBMED   14990749
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017669.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05872.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Pseudomonas monteilii"
                     /db_xref="taxon:76759"
     Protein         1..491
                     /product="helicase HerA-like domain-containing protein"
                     /calculated_mol_wt=52056
     Region          9..491
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 msesstivvg agpdgqpvgq amrlanrhgl vagatgtgkt vtlqhlaevf sdagvavfaa
       61 dvkgdlcglg aagapqgkva eriagmpwlg htpraypvsl wdiagqsghp lrttlsemgp
      121 lllgnllelt dsqqaalyaa fkvadregll lldlkdlkal lahlkdnpql lgedsalmtt
      181 astqallrrl atleqqgaea lfgepalqle dllrpdpdgr grihlldasr lvheapkvya
      241 tfllwllael feqlpergda dkpvlalffd eahllfngtp kalqdrleqv vrlirskgvg
      301 vyfvtqspgd lpdavlaqlg lriqhglraf takeqkslra vadgfrpnpa fdtlavltel
      361 gigealvgtl eekgtpamvq rvlvappqsr igplsaaers aliatsplag rydkpvdres
      421 ayemltqrkg eavepapqpk adeesfadka gdflqgaagq aiksavrqaa nqlgrqlvrg
      481 lmgsllggkk r
//
LOCUS       WP_235200237             272 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6515 family protein [Pseudomonas monteilii].
ACCESSION   WP_235200237
VERSION     WP_235200237.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas monteilii
  ORGANISM  Pseudomonas monteilii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040452.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20125.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Pseudomonas monteilii"
                     /db_xref="taxon:76759"
     Protein         1..272
                     /product="DUF6515 family protein"
                     /calculated_mol_wt=29940
     Region          <105..177
                     /region_name="DUF6515"
                     /note="Family of unknown function (DUF6515); pfam20125"
                     /db_xref="CDD:466293"
ORIGIN      
        1 mksriwqlag vgllglsisl galaeghger gqqmqgeggp grslnsrdev rqtqpprqgy
       61 yqdiphrhgd dhhwqaggpr pggdwqgrpd ghgngwgpgp qyrpghtidh lpdrywkvpy
      121 rgadyfysgg ywyrphggsy ivvappygvr vsylpsyare vwlggalffl vadtyyqyla
      181 dsqeyvvvnp pvgvpapvpv apanggydvv aypmygqgqq qqdqdryqch rwavsqsgfd
      241 patatyappa nlldnyrral gacfsgrgys in
//
LOCUS       WP_235200325             401 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase [Pseudomonas monteilii].
ACCESSION   WP_235200325
VERSION     WP_235200325.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas monteilii
  ORGANISM  Pseudomonas monteilii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025059.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13679.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Pseudomonas monteilii"
                     /db_xref="taxon:76759"
     Protein         1..401
                     /product="methyltransferase"
                     /calculated_mol_wt=45340
     Region          107..233
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
ORIGIN      
        1 mpsylhshhi strfqaldqf liehqqlwkp rpfttlrldw etthpelath lrqcsladae
       61 tdsaadalpa pfpqlaqqaq qltalgslpq tdlppaahrl dvavpgrkwq qieafarhla
      121 fhhqprhwld wcsgkghlgr rllqpgqqlt cleydaelva agqalsahhh lpaqhvhqdv
      181 masdsachla geksvvalha cgdlhvrlmq lasqqgcrql aiapccynri avqhyqplst
      241 aaqasglqls lddlglplse tvtagarvrr qrdtsmarrl gfdllqrqqr qrdeylptps
      301 lpvawlekpf eqycrdlael kqlplngnpd waaleaagwq rlaevrnler vrnlfrrple
      361 vwlvldralf leeqgfevrl glfcdypltp rnllilaerd r
//
LOCUS       WP_235200358             610 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: AAA family ATPase [Pseudomonas putida group].
ACCESSION   WP_235200358
VERSION     WP_235200358.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas putida group
  ORGANISM  Pseudomonas putida group
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024573.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13175.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Pseudomonas putida group"
                     /db_xref="taxon:136845"
     Protein         1..610
                     /product="AAA family ATPase"
                     /calculated_mol_wt=66866
     Region          1..378
                     /region_name="AAA_15"
                     /note="AAA ATPase domain; pfam13175"
                     /db_xref="CDD:433011"
     Region          425..496
                     /region_name="OLD-like_TOPRIM"
                     /note="Overcoming lysogenization defect protein-like,
                     TOPRIM domain; pfam20469"
                     /db_xref="CDD:466618"
ORIGIN      
        1 mrlktvklsh frgystptvi pidssmtgiv grndfgksti lealaiffds adikpdksdm
       61 ncfslaeght qfeiacefdd lpealvlden vhtslsqeyl lnaagvlevv ktfkastgkl
      121 dstaircehp sdkalaslls lkmvdlkklg aqfeiadrva dqrvasqwrk airdaagdva
      181 cqetlldvgk glstegksvw dkieallptf alfkadress dgdaeaknpl qqavkeaqaa
      241 lqeqiseler qiessvldva grtldklrem apelaneltp rfkekpkwsf sftlegengi
      301 pinkrgsgvr rlillnffra eaeknavags prnviyaiee petsqhpnyq mmlmkallel
      361 snqtnrqiiv tthvpalagl mpidgiryvt kdeqgvpivk mptkevltea aeslgvlpet
      421 gmerakgvvl vegksdvtfl rhtsntlkag ghlpssleda givpiliggc gsvkhwvtln
      481 laddlglpwc vfldsdvggs peqvaailkr kqevegqgra fystrkreie nylcpdmida
      541 qsgkrvtftd tcdakkiigk avgmkpddvi dkfwplmtat qiidrstyhd ngvdraelkd
      601 llenllklva
//
LOCUS       WP_235200363             191 aa            linear   BCT 02-MAR-2025
DEFINITION  D-Ala-D-Ala carboxypeptidase family metallohydrolase [Pseudomonas
            monteilii].
ACCESSION   WP_235200363
VERSION     WP_235200363.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas monteilii
  ORGANISM  Pseudomonas monteilii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019896.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08291.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Pseudomonas monteilii"
                     /db_xref="taxon:76759"
     Protein         1..191
                     /product="D-Ala-D-Ala carboxypeptidase family
                     metallohydrolase"
                     /calculated_mol_wt=21033
     Region          <96..178
                     /region_name="YcbK"
                     /note="Uncharacterized conserved protein YcbK, DUF882
                     family [Function unknown]; COG3108"
                     /db_xref="CDD:442342"
ORIGIN      
        1 mkkrllvagl llvgaahade rdlwmfaqwa gdhqtrpfre mlvdarlygv vpihqllrsa
       61 sdwklcqasp favppasnwa avrstlslik tlddqgilrq fevvsayrnp rlnncaggaa
      121 nsahtrafav dillpawadp nplcrfwqqy gqawnmglgr ypsgrihvdt agyrtwggdg
      181 sagssfcikp r
//
LOCUS       WP_235200475             192 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2491 family protein [Pseudomonas monteilii].
ACCESSION   WP_235200475
VERSION     WP_235200475.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas monteilii
  ORGANISM  Pseudomonas monteilii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10679.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Pseudomonas monteilii"
                     /db_xref="taxon:76759"
     Protein         1..192
                     /product="DUF2491 family protein"
                     /calculated_mol_wt=21284
     Region          3..190
                     /region_name="DUF2491"
                     /note="Protein of unknown function (DUF2491); pfam10679"
                     /db_xref="CDD:431431"
ORIGIN      
        1 mspfglfigr lfnpspalkp lldgyselqv pdaqavcalg evdlgeavql krfylddedy
       61 wlqvlmngne agdtvlfgyh saipvrdqah lqqvvgsqss vgmpifehdg ylysrqwgre
      121 qgkapfvslh eqvvnqsary gishlsmlya rdtglperre flllsieede qgsltfttsl
      181 gatlfpsdfh vt
//
LOCUS       WP_235200389             520 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: relaxase/mobilization nuclease domain-containing
            protein [Pseudomonas].
ACCESSION   WP_235200389
VERSION     WP_235200389.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
REFERENCE   1  (residues 1 to 520)
  AUTHORS   Meyer,R.
  TITLE     Identification of the mob genes of plasmid pSC101 and
            characterization of a hybrid pSC101-R1162 system for conjugal
            mobilization
  JOURNAL   J Bacteriol 182 (17), 4875-4881 (2000)
   PUBMED   10940031
REFERENCE   2  (residues 1 to 520)
  AUTHORS   Bravo-Angel,A.M., Gloeckler,V., Hohn,B. and Tinland,B.
  TITLE     Bacterial conjugation protein MobA mediates integration of complex
            DNA structures into plant cells
  JOURNAL   J Bacteriol 181 (18), 5758-5765 (1999)
   PUBMED   10482518
REFERENCE   3  (residues 1 to 520)
  AUTHORS   Byrd,D.R. and Matson,S.W.
  TITLE     Nicking by transesterification: the reaction catalysed by a
            relaxase
  JOURNAL   Mol Microbiol 25 (6), 1011-1022 (1997)
   PUBMED   9350859
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015397.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03432.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..520
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /calculated_mol_wt=58779
     Region          20..257
                     /region_name="Relaxase"
                     /note="Relaxase/mobilization nuclease domain; cl21589"
                     /db_xref="CDD:451322"
ORIGIN      
        1 mirkvcsklp dsasmgrsmn yalkkaalvg gseakfdgts iadyvklgvk kidqvnnkye
       61 aktgrkqevk glhemisfda sddvspekaa elalnvwrdv ldidnhrhrw avhtdtdkih
      121 vhliwnkrdn ggkvyeqlnd yelfekalhk teienglkvv enrkfikpgm ptnpqpsnew
      181 ryekkgeksk ktlfkeavas atdkamtage flefldrdgy tlilngsqgy slekegqifk
      241 asevgasykl lkarfgddpq fsdtlarlgv kkaperemgg isfdmyvtqa dldkyeakkk
      301 ksnrvldtrf dshdghefyf knstkkafey daqrgrvdfn snsptavkag lqkltenvke
      361 ptsfklggsd yakreiwlqf hlmgldkkgh tlsgysptla dkskleqekn kfgnssskst
      421 etdkpndpkk dkkeqqktks savavsdlvd avklesites ktesaavnaf slensfsynk
      481 iedklsemrv idkeikdkse eseseyhrkk krkknmphpd
//
LOCUS       WP_235200480             285 aa            linear   BCT 02-MAR-2025
DEFINITION  CheR family methyltransferase [Polycyclovorans algicola].
ACCESSION   WP_235200480
VERSION     WP_235200480.1
KEYWORDS    RefSeq.
SOURCE      Polycyclovorans algicola
  ORGANISM  Polycyclovorans algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Nevskiales; Nevskiaceae; Polycyclovorans.
REFERENCE   1  (residues 1 to 285)
  AUTHORS   Djordjevic,S. and Stock,A.M.
  TITLE     Crystal structure of the chemotaxis receptor methyltransferase CheR
            suggests a conserved structural motif for binding
            S-adenosylmethionine
  JOURNAL   Structure 5 (4), 545-558 (1997)
   PUBMED   9115443
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013867.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01739.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Polycyclovorans algicola"
                     /db_xref="taxon:616992"
     Protein         1..285
                     /product="CheR family methyltransferase"
                     /calculated_mol_wt=32313
     Region          21..279
                     /region_name="PRK10611"
                     /note="protein-glutamate O-methyltransferase CheR"
                     /db_xref="CDD:236725"
ORIGIN      
        1 mttlaqappg tdardyrftt ahfrfvqqri hqlagialld skqdmvysrl mrrlralrid
       61 dfdqylaivk ndahpeveaf vnalttnlta ffreahhfer lithlrrsna prplkiwcaa
      121 astgeepwsl aitaceafnt lrppveiiat didtdalaaa asgryplsrl aplsvdqkrn
      181 fflrgkgahd gfarvrpelt glirfenwnl lsrqpppwrd vdavfcrnvm iyfdkptqlh
      241 vleqiravir pdglmfaghs esffhaqhlf rslgqtvyap vaahk
//
LOCUS       WP_235200486              99 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6388 family protein [Pseudomonas].
ACCESSION   WP_235200486
VERSION     WP_235200486.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
REFERENCE   1  (residues 1 to 99)
  AUTHORS   Kim,S.Y., Ju,K.S., Metcalf,W.W., Evans,B.S., Kuzuyama,T. and van
            der Donk,W.A.
  TITLE     Different biosynthetic pathways to fosfomycin in Pseudomonas
            syringae and Streptomyces species
  JOURNAL   Antimicrob Agents Chemother 56 (8), 4175-4183 (2012)
   PUBMED   22615277
REFERENCE   2  (residues 1 to 99)
  AUTHORS   Shoji,J., Kato,T., Hinoo,H., Hattori,T., Hirooka,K., Matsumoto,K.,
            Tanimoto,T. and Kondo,E.
  TITLE     Production of fosfomycin (phosphonomycin) by Pseudomonas syringae
  JOURNAL   J Antibiot (Tokyo) 39 (7), 1011-1012 (1986)
   PUBMED   3759643
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040398.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19925.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..99
                     /product="DUF6388 family protein"
                     /calculated_mol_wt=11464
     Region          1..96
                     /region_name="DUF6388"
                     /note="Family of unknown function (DUF6388); pfam19925"
                     /db_xref="CDD:437757"
ORIGIN      
        1 miakearqal alqrfaeanp qlleeireld preqaqqiew afedaaeeqg iepwelalql
       61 iaetpeqlqa mrlethreva ealgmeweey cqfneidpe
//
LOCUS       WP_235200557             191 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphoribosyltransferase family protein [Pseudomonas monteilii].
ACCESSION   WP_235200557
VERSION     WP_235200557.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas monteilii
  ORGANISM  Pseudomonas monteilii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 191)
  AUTHORS   Islam,M.R., Kim,H., Kang,S.W., Kim,J.S., Jeong,Y.M., Hwang,H.J.,
            Lee,S.Y., Woo,J.C. and Kim,S.G.
  TITLE     Functional characterization of a gene encoding a dual domain for
            uridine kinase and uracil phosphoribosyltransferase in Arabidopsis
            thaliana
  JOURNAL   Plant Mol Biol 63 (4), 465-477 (2007)
   PUBMED   17143579
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012383.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00156.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Pseudomonas monteilii"
                     /db_xref="taxon:76759"
     Protein         1..191
                     /product="phosphoribosyltransferase family protein"
                     /GO_process="GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=21180
     Region          6..185
                     /region_name="PyrR"
                     /note="Pyrimidine operon attenuation protein PyrR/uracil
                     phosphoribosyltransferase [Nucleotide transport and
                     metabolism]; COG2065"
                     /db_xref="CDD:441668"
ORIGIN      
        1 mnrpassrvr lydeqdlnsv lrkmahqala fipaqplvlv giqrrgepla rrlqlhlqql
       61 tggaaplply pikvkryadd lsllhahtql tenpelanlk ladttllvid dvlyeghsll
      121 rpcaylaelg arrvlsavlv drhacrqpvh ahfvgihlqv aeqdivechv ppfeadfsve
      181 lirhgragdt v
//
LOCUS       WP_235200584             455 aa            linear   BCT 02-MAR-2025
DEFINITION  erythromycin esterase family protein [Pseudomonas monteilii].
ACCESSION   WP_235200584
VERSION     WP_235200584.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas monteilii
  ORGANISM  Pseudomonas monteilii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 455)
  AUTHORS   Arthur,M., Autissier,D. and Courvalin,P.
  TITLE     Analysis of the nucleotide sequence of the ereB gene encoding the
            erythromycin esterase type II
  JOURNAL   Nucleic Acids Res 14 (12), 4987-4999 (1986)
   PUBMED   3523438
REFERENCE   2  (residues 1 to 455)
  AUTHORS   Ounissi,H. and Courvalin,P.
  TITLE     Nucleotide sequence of the gene ereA encoding the erythromycin
            esterase in Escherichia coli
  JOURNAL   Gene 35 (3), 271-278 (1985)
   PUBMED   3899861
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016994.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05139.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Pseudomonas monteilii"
                     /db_xref="taxon:76759"
     Protein         1..455
                     /product="erythromycin esterase family protein"
                     /GO_process="GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /calculated_mol_wt=51913
     Region          18..440
                     /region_name="YbfO"
                     /note="Erythromycin esterase homolog [Secondary
                     metabolites biosynthesis, transport and catabolism];
                     COG2312"
                     /db_xref="CDD:441886"
ORIGIN      
        1 mngpskklme klygkqyqvd tadiapvlhq yaeplpdldt pafaalfdry adarvillge
       61 ashgssefyr araaitrrli eqhgfnivav eadwpdaghv dqyvrglaha awkrhifsrf
      121 ptwmwrnsev ktfaqwlhgh nrrlpadhrv efrgldvysl rnsihevlay ldrvdphlah
      181 earrrygclt pwqddpalyg hfverggvmp ceqpviqqln vmlaeqlsgl vrndeaffna
      241 tqnarviiaa eqyyraiyrg staswnlrdr hmfdtlhall ehrgphakav vwahnshign
      301 agatemgwkg qfnigqlcrs afghdavlig matdrghvaa addwdgdmki keirpsrsds
      361 wehhfrlagv paclsdwrdp qrkelrhvls talleraigv iyrpeserls hyfeavlaeq
      421 fdallwfeqt spvtalplpk qqhlepedet ypfgv
//
LOCUS       WP_235200609             415 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)/FAD-dependent oxidoreductase [Pseudomonas monteilii].
ACCESSION   WP_235200609
VERSION     WP_235200609.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas monteilii
  ORGANISM  Pseudomonas monteilii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11458465
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Pseudomonas monteilii"
                     /db_xref="taxon:76759"
     Protein         1..415
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /EC_number="1.-.-.-"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=46485
     Region          1..415
                     /region_name="Ppro0129"
                     /note="Predicted flavin-containing amine oxidase [General
                     function prediction only]; COG2907"
                     /db_xref="CDD:442151"
ORIGIN      
        1 mriaiigsgi agltcahlls rkhevtvfea eqwigghtht ldvvwqgqry aidtgfivfn
       61 dwtypnfirl ldqlkvtsqp temsfsvhdp vigleynghd lntlfaqrrn lvspgfwgmi
      121 rdilrfnrqa ladldnrrid qdttlgaylq tqrygqrfid hyivpmgssi wsmsradmlh
      181 fpleffvrfc rnhgllsvnq rpqwrvvqgg srsyiaplcr pfaerirlkc kvsrvsrddg
      241 gvnlvsaagp erfdnvvfac hsdqalalle tptmqeravl gaigyasndv vlhtdtrllp
      301 rrksawaswn yrlggpeqap aaltynmnil qgiqapttfc vslnqtalid paqviarfqy
      361 ahpqysiaas aaqacqaqlq gqlhsyfcga ywgngfhedg vvsalkvaah fgeql
//
LOCUS       WP_235200710             502 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: RICIN domain-containing protein [Paenibacillus].
ACCESSION   WP_235200710
VERSION     WP_235200710.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus
  ORGANISM  Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025563.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14200.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Paenibacillus"
                     /db_xref="taxon:44249"
     Protein         1..502
                     /product="RICIN domain-containing protein"
                     /calculated_mol_wt=54335
     Region          65..327
                     /region_name="GH43_CtGH43-like"
                     /note="Glycosyl hydrolase family 43 protein such as
                     Clostridium thermocellum exo-beta-1,3-galactanase
                     (Ct1,3Gal43A or CtGH43); cd18822"
                     /db_xref="CDD:350143"
     Region          363..499
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cl49609"
                     /db_xref="CDD:483949"
     Site            order(377..379,390,392,399..400)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467324"
     Site            order(424..425,437,439,446..447)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467324"
     Site            order(471..473,484,486,493..494)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467324"
ORIGIN      
        1 mamndgwlkk nthsrrftrr lsyllalvla lqsigmllap gpnasaapls vtngiqfkdt
       61 ngnvvhahgg gmikangyyy wfgenrntng tfkavsvyrs sdlksweyrn dvltsssaae
      121 lnisnierpk viynsatgky vlwmhkengl dygearvava tsntvdgnyt yvgsyrplgy
      181 dsrdmtvynd ngtaylisat rvnadlniyk ltpdflgves lvttlwpgqy reapalfkkd
      241 gvyflitsga tgwnpnqaky atassitgtw sglsnfgdst tygsqstyvv pvegsqttsy
      301 lymgdrwaga wsgpvqdsky vwlplsfpsa tslamnwass itidtatgtv tgvstpdvwd
      361 pnvsyqlisr ksnkllnvig gssangadle qradggmtsq qwqitdaggg yvkiinrssg
      421 kligvengat tdgavieqwn dggwasqqwq lvhvgggyyk lknrstgkvl dissqsladg
      481 aaaiqwtdng gtnqhfqivk vq
//
LOCUS       WP_235200716             369 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: stalk domain-containing protein [unclassified
            Paenibacillus].
ACCESSION   WP_235200716
VERSION     WP_235200716.1
KEYWORDS    RefSeq.
SOURCE      unclassified Paenibacillus
  ORGANISM  unclassified Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 369)
  AUTHORS   Wilmot,C.M., Hajdu,J., McPherson,M.J., Knowles,P.F. and
            Phillips,S.E.
  TITLE     Visualization of dioxygen bound to copper during enzyme catalysis
  JOURNAL   Science 286 (5445), 1724-1728 (1999)
   PUBMED   10576737
REFERENCE   2  (residues 1 to 369)
  AUTHORS   Parsons,M.R., Convery,M.A., Wilmot,C.M., Yadav,K.D., Blakeley,V.,
            Corner,A.S., Phillips,S.E., McPherson,M.J. and Knowles,P.F.
  TITLE     Crystal structure of a quinoenzyme: copper amine oxidase of
            Escherichia coli at 2 A resolution
  JOURNAL   Structure 3 (11), 1171-1184 (1995)
   PUBMED   8591028
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019450.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07833.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="unclassified Paenibacillus"
                     /db_xref="taxon:185978"
     Protein         1..369
                     /product="stalk domain-containing protein"
                     /calculated_mol_wt=39955
     Region          67..>97
                     /region_name="Cu_amine_oxidN1"
                     /note="Copper amine oxidase N-terminal domain; pfam07833"
                     /db_xref="CDD:400265"
ORIGIN      
        1 mmkknmkksv atmmvlgmtl tgatgvfagt qlekisayln hgisfnvdga aysptdgngn
       61 klapitynns tylpvralad alhvpvsydg kkgqviigqa tsnpsaltnv tysaaqkeai
      121 qkafaqfdgf etayapqqmi agdtfksvgv ggdgvsfvfn hmkvdvsprd ysdgytskdv
      181 klsngviakw ytpdqtgmlt fqlddryvtl sspdhklsqv qlqqvavsvq kansnndqgi
      241 tafadvnysk qqldnirkaf akfdgfttay apqhmvagdt fksvgaggdg vnfvfnrmnv
      301 tvspkdysfs ydgktvklpn gvsakwytpd qtdmltfkld dryvtisspn nqlthtqleq
      361 mavsvqkvk
//
LOCUS       WP_235200763             173 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GNAT family N-acetyltransferase [Paenibacillus].
ACCESSION   WP_235200763
VERSION     WP_235200763.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus
  ORGANISM  Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae.
REFERENCE   1  (residues 1 to 173)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 173)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Paenibacillus"
                     /db_xref="taxon:44249"
     Protein         1..173
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=20124
     Region          3..167
                     /region_name="COG5628"
                     /note="Predicted acetyltransferase [General function
                     prediction only]"
                     /db_xref="CDD:444356"
ORIGIN      
        1 mkmnvqitsi laeqkelfln lynlylydls efsgedllee gkydptntyl ylerdelhpf
       61 liqyegkvig fvlvcsppyv pegvdytvqe lflvkkyrgq glaaqtvdlv faqfegtfkv
      121 eqlannatav sfwkkyyeqh qieyteseyn ieidniagsh rilsqtfvre rek
//
LOCUS       WP_235200764             170 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF4275 family protein [Paenibacillus].
ACCESSION   WP_235200764
VERSION     WP_235200764.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus
  ORGANISM  Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025466.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14101.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Paenibacillus"
                     /db_xref="taxon:44249"
     Protein         1..170
                     /product="DUF4275 family protein"
                     /calculated_mol_wt=20324
     Region          33..164
                     /region_name="DUF4275"
                     /note="Domain of unknown function (DUF4275); pfam14101"
                     /db_xref="CDD:316612"
ORIGIN      
        1 mmirdkinel ldalpemeln raywgierih qeyifkknlq dkgvivsely deseeivqkw
       61 dsvfsnnidd vvkesihysq ykwhmfsyeq qkclthdear dafdaepkde vyvmyesggw
      121 vllyenanrv iaadfdseqd iyifdraftw tyvythesmc gpyfykieqa
//
LOCUS       WP_235200796             369 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Paenibacillus sp. FSL H7-689].
ACCESSION   WP_235200796
VERSION     WP_235200796.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL H7-689
  ORGANISM  Paenibacillus sp. FSL H7-689
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 369)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Paenibacillus sp. FSL H7-689"
                     /db_xref="taxon:1227349"
     Protein         1..369
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=42540
     Region          8..128
                     /region_name="REC_YesN-like"
                     /note="phosphoacceptor receiver (REC) domain of YesN and
                     related helix-turn-helix containing response regulators;
                     cd17536"
                     /db_xref="CDD:381091"
     Site            order(13..16,19..21,24,110..111)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381091"
     Region          137..357
                     /region_name="AraC"
                     /note="AraC-type DNA-binding domain and AraC-containing
                     proteins [Transcription]; COG2207"
                     /db_xref="CDD:441809"
     Region          272..354
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
ORIGIN      
        1 mnkelyrvll vddepwnrdi lrnlgdwnel gmtvageaed geqaiqlvkq hqphiiitdm
       61 rmpgtdgvel lhtlsgqypq ikvivvsgyd dfnyakhair hraadyllkp vnpdelngvl
      121 akcakelekv esapeswesy pssfagefsl fqqqarlrfn dlngqslrew fqqlqqkler
      181 ceinrprqlg rvahelqall delcvsngly erpeatalpp aaalasiest iawistpyyq
      241 aleqliaqrk fknklnlnev kqyieqhcme mitleqlaqi ffvskeylsk vfkkeyevnv
      301 tdyviqlrmt rakewvmdeq ipfkhvaema gyedvsyfyr vfkkhfgvsp gemrkgqprm
      361 sgnsasrte
//
LOCUS       WP_235200765             287 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: helix-turn-helix domain-containing protein
            [Paenibacillus].
ACCESSION   WP_235200765
VERSION     WP_235200765.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus
  ORGANISM  Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Paenibacillus"
                     /db_xref="taxon:44249"
     Protein         1..287
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=32927
     Region          <146..287
                     /region_name="GlxA"
                     /note="Transcriptional regulator GlxA, contains an amidase
                     domain and an AraC-type DNA-binding HTH domain
                     [Transcription]; COG4977"
                     /db_xref="CDD:444002"
ORIGIN      
        1 mleiplprpa pfilhessse fdwkgsgsls lktfrngktl yeaghghyav nnenylllne
       61 gqeyslhids stpvesfcif fppgyveeig rnlitsdirl ldepysysss skmewverty
      121 amdnrlgaal nhlrnlyspd tldswaiaeq lhqlavhmld lhrnvqqein eldmirrstr
      181 eelyrrvyig heyisayydq pltleqtasa aqlsvnhflr sykklfgtsp hryltecrll
      241 aakgllldsd rsvtnicydv gfeslgsfss lftrrfhssp sqlrakr
//
LOCUS       WP_235200849             281 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: PRD domain-containing protein [Paenibacillus].
ACCESSION   WP_235200849
VERSION     WP_235200849.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus
  ORGANISM  Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae.
REFERENCE   1  (residues 1 to 281)
  AUTHORS   Graille,M., Zhou,C.Z., Receveur-Brechot,V., Collinet,B.,
            Declerck,N. and van Tilbeurgh,H.
  TITLE     Activation of the LicT transcriptional antiterminator involves a
            domain swing/lock mechanism provoking massive structural changes
  JOURNAL   J Biol Chem 280 (15), 14780-14789 (2005)
   PUBMED   15699035
REFERENCE   2  (residues 1 to 281)
  AUTHORS   Declerck,N., Dutartre,H., Receveur,V., Dubois,V., Royer,C.,
            Aymerich,S. and van Tilbeurgh,H.
  TITLE     Dimer stabilization upon activation of the transcriptional
            antiterminator LicT
  JOURNAL   J Mol Biol 314 (4), 671-681 (2001)
   PUBMED   11733988
REFERENCE   3  (residues 1 to 281)
  AUTHORS   van Tilbeurgh,H. and Declerck,N.
  TITLE     Structural insights into the regulation of bacterial signalling
            proteins containing PRDs
  JOURNAL   Curr Opin Struct Biol 11 (6), 685-693 (2001)
   PUBMED   11751049
REFERENCE   4  (residues 1 to 281)
  AUTHORS   van Tilbeurgh,H., Le Coq,D. and Declerck,N.
  TITLE     Crystal structure of an activated form of the PTS regulation domain
            from the LicT transcriptional antiterminator
  JOURNAL   EMBO J 20 (14), 3789-3799 (2001)
   PUBMED   11447120
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013070.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00874.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Paenibacillus"
                     /db_xref="taxon:44249"
     Protein         1..281
                     /product="PRD domain-containing protein"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=32035
     Region          4..274
                     /region_name="PRK09772"
                     /note="transcriptional antiterminator BglG; Provisional"
                     /db_xref="CDD:170086"
ORIGIN      
        1 mrtlkvikkv nnnvaiaine hneevfvvgk gvgflktpye ltetdlveki fvapknirmy
       61 dllnsipied iylaeevikl gsqilnktfn pnllltlsdh isfaltrtre giriknplew
      121 evrtlypdet rvgeaalkli qektdialpt aettlialhf vnaqvgsgem tdttkvttvt
      181 geilsvikya lkidfqedsi hfmrfathir yfilrqmsgk slkdeneslf lmvkekfpke
      241 lacvekiadf lknnygwtcs ddeklylilh iqrlisnept e
//
LOCUS       WP_235200856             415 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA glycosylase AlkZ-like family protein [Paenibacillus sp. FSL
            H7-689].
ACCESSION   WP_235200856
VERSION     WP_235200856.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL H7-689
  ORGANISM  Paenibacillus sp. FSL H7-689
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 415)
  AUTHORS   Bradley,N.P., Washburn,L.A., Christov,P.P., Watanabe,C.M.H. and
            Eichman,B.F.
  TITLE     Escherichia coli YcaQ is a DNA glycosylase that unhooks DNA
            interstrand crosslinks
  JOURNAL   Nucleic Acids Res 48 (13), 7005-7017 (2020)
   PUBMED   32409837
REFERENCE   2  (residues 1 to 415)
  AUTHORS   Mullins,E.A., Warren,G.M., Bradley,N.P. and Eichman,B.F.
  TITLE     Structure of a DNA glycosylase that unhooks interstrand cross-links
  JOURNAL   Proc Natl Acad Sci U S A 114 (17), 4400-4405 (2017)
   PUBMED   28396405
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017984.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06224.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Paenibacillus sp. FSL H7-689"
                     /db_xref="taxon:1227349"
     Protein         1..415
                     /product="DNA glycosylase AlkZ-like family protein"
                     /GO_function="GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA]"
                     /GO_process="GO:0036297 - interstrand cross-link repair
                     [Evidence IEA]"
                     /calculated_mol_wt=47327
     Region          13..414
                     /region_name="HTH_42"
                     /note="Winged helix DNA-binding domain; cl19833"
                     /db_xref="CDD:473220"
ORIGIN      
        1 mttalhmnkk ivrrfllqtq allgrwpavs lpsgpdqvls lirslgcvqi dpvaavtgnq
       61 hlvlgardpg ytadslntll sdhkvfeyfa naacvipmed yalfepvrar lrerlapslq
      121 glektvqhvl qrlkeegplp srafraverv sgywdsadvp ktkdttlaln llldsavirv
      181 varqgneryf hiteselqqq glpmiddidv laqrqalldk yihayrvvda rdprlgwlks
      241 taaerradia arvsdgrmip lkvedvatpy yiraededll lhmereephy dpsgpvrflp
      301 pldnllwrre rivdlfdfhy kweiytpevk rtygyyampi lhgdrligrm dprldrktgv
      361 ltvrllsmee tappaeewit dfreglqffa smhgarsiti ektvpkelkk llksi
//
LOCUS       WP_235200890             739 aa            linear   BCT 02-MAR-2025
DEFINITION  tape measure protein [Pseudomonas aeruginosa].
ACCESSION   WP_235200890
VERSION     WP_235200890.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040129.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20155.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..739
                     /product="tape measure protein"
                     /calculated_mol_wt=77090
     Region          2..161
                     /region_name="TMP_3"
                     /note="Tape measure protein; pfam20155"
                     /db_xref="CDD:466312"
     Region          <439..>702
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
ORIGIN      
        1 mtadvyriaq ltssaldsta tvyqrfaqna drlnisqrqv asltdtvaks iaisgasaqs
       61 aeaalvqfgq alasgvlrge efnsvseqap allkaiadgl nvnigelrkm anegqltadv
      121 lvdalsnaaa gvndqfatri ktvsmavqel enaftrlvge ftngrgagea lagaisgvan
      181 vmdglsdnae llgtaldavm vtaagravaa itgltttwls naaasraaai aaaqkatade
      241 gaavaaqraa aqelqrakaa vasaeaevaa srarqaaslq nlrdvqaalv aertleqarl
      301 qaqitdigrq qslarlaelr lseaaiirqv qaaeaalast tlassaavta ayqrrtaava
      361 aaasaqqalt vatnnanias aaaaaassfl argmgtvtav ggrllgflgg pigvismiai
      421 aatafldfgs daesgmdraa natesasvri rnasrniiqa lnlgdlktan ydqlgksieq
      481 ikqqlaeaeq iqqraealqd tdvptvpgmd lpsldeaner vqaltgalrr leaeragdrf
      541 knvregkqyl enlerqnerl qnltateeal nylrkegida tselgrkild qaaanqklda
      601 tnkaeaeskr qseaaarksa qtseqlrksq egyvtqlerq aallgmnsae vrayelaekg
      661 ltgalrarae aalaaidade krrqadanas anadlqaeyl ratgapltrd cwrfgrnltr
      721 cvgtskrrat tpawpgsts
//
LOCUS       WP_235200932             295 aa            linear   BCT 02-MAR-2025
DEFINITION  outer membrane protein OmpK [Photorhabdus aegyptia].
ACCESSION   WP_235200932
VERSION     WP_235200932.1
KEYWORDS    RefSeq.
SOURCE      Photorhabdus aegyptia
  ORGANISM  Photorhabdus aegyptia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Photorhabdus.
REFERENCE   1  (residues 1 to 295)
  AUTHORS   Inoue,T., Matsuzaki,S. and Tanaka,S.
  TITLE     Cloning and sequence analysis of Vibrio parahaemolyticus ompK gene
            encoding a 26-kDa outer membrane protein, OmpK, that serves as
            receptor for a broad-host-range vibriophage, KVP40
  JOURNAL   FEMS Microbiol Lett 134 (2-3), 245-249 (1995)
   PUBMED   8586275
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015466.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03502.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Photorhabdus aegyptia"
                     /db_xref="taxon:2805098"
     Protein         1..295
                     /product="outer membrane protein OmpK"
                     /GO_component="GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /calculated_mol_wt=34070
     Region          43..294
                     /region_name="Tsx"
                     /note="Nucleoside-specific outer membrane channel protein
                     Tsx [Cell wall/membrane/envelope biogenesis]; COG3248"
                     /db_xref="CDD:442479"
ORIGIN      
        1 mllatkihnt knypplfftl slssrfygaa ylamawrwig trlkksglpa mllllatinq
       61 aqagnfvnfq sidtslyvqf enrvdpqkti spileafgdy svgdmyvysi wqnslqsdyq
      121 gdkstyyykf vprvslskva gndisfgpvk dilfaqwiak tkgidydyfp gisidwqasw
      181 vswlrtifyf ennakgswnd qrihidygip fnnrlgdfrv vgtfdytlgl hgqsetidfk
      241 pelhydlgkh lghqpghlwt givlnpiknk ykirdtpyyr tdqfsygifi rysff
//
LOCUS       WP_235200937             362 aa            linear   BCT 02-MAR-2025
DEFINITION  histidine kinase [Photorhabdus aegyptia].
ACCESSION   WP_235200937
VERSION     WP_235200937.1
KEYWORDS    RefSeq.
SOURCE      Photorhabdus aegyptia
  ORGANISM  Photorhabdus aegyptia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Photorhabdus.
REFERENCE   1  (residues 1 to 362)
  AUTHORS   Grebe,T.W. and Stock,J.B.
  TITLE     The histidine protein kinase superfamily
  JOURNAL   Adv Microb Physiol 41, 139-227 (1999)
   PUBMED   10500846
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019350.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07730.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Photorhabdus aegyptia"
                     /db_xref="taxon:2805098"
     Protein         1..362
                     /product="histidine kinase"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=42027
     Region          <35..359
                     /region_name="PRK10600"
                     /note="nitrate/nitrite two-component system sensor
                     histidine kinase NarX"
                     /db_xref="CDD:182581"
ORIGIN      
        1 mlsitnvyfl ikvvhnsapv kewqharyka einalkqkng yldflcqshf klqnckllpe
       61 klqeifshln rlipfceaki ifypsqqeys frnphqcpyf dvplitrwnl ddnidnygtl
      121 wikthrnsdl tpdekslvqd vvtlmtnkll renqlqcqhq svlaaeraai srelhdsiaq
      181 slsflkiqvn clyigsdnlp kqsltslnmi kdelniayrq lrellatfrn eqpqcnlqes
      241 lqdlinefnh rlgfniefny rlthqhipds yskhliqiir eclnncykha danwisvriy
      301 piddkiitvv sdngqginld sanknkfgma imqdrvsilg gqlqiknrkh ggteveiqfs
      361 ld
//
LOCUS       WP_235200685             432 aa            linear   BCT 02-MAR-2025
DEFINITION  thrombospondin type 3 repeat-containing protein [Polycyclovorans
            algicola].
ACCESSION   WP_235200685
VERSION     WP_235200685.1
KEYWORDS    RefSeq.
SOURCE      Polycyclovorans algicola
  ORGANISM  Polycyclovorans algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Nevskiales; Nevskiaceae; Polycyclovorans.
REFERENCE   1  (residues 1 to 432)
  AUTHORS   Kvansakul,M., Adams,J.C. and Hohenester,E.
  TITLE     Structure of a thrombospondin C-terminal fragment reveals a novel
            calcium core in the type 3 repeats
  JOURNAL   EMBO J 23 (6), 1223-1233 (2004)
   PUBMED   15014436
REFERENCE   2  (residues 1 to 432)
  AUTHORS   Lawler,J. and Hynes,R.O.
  TITLE     The structure of human thrombospondin, an adhesive glycoprotein
            with multiple calcium-binding sites and homologies with several
            different proteins
  JOURNAL   J Cell Biol 103 (5), 1635-1648 (1986)
   PUBMED   2430973
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014466.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02412.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Polycyclovorans algicola"
                     /db_xref="taxon:616992"
     Protein         1..432
                     /product="thrombospondin type 3 repeat-containing protein"
                     /GO_function="GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0007155 - cell adhesion [Evidence IEA]"
                     /calculated_mol_wt=43687
     Region          13..81
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275366"
     Region          14..>156
                     /region_name="gliding_CglD"
                     /note="adventurous gliding motility lipoprotein CglD;
                     NF033765"
                     /db_xref="CDD:468178"
     Region          82..100
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275366"
     Region          <266..>327
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
ORIGIN      
        1 mlltagtavh aadadrdgdg ipdgfdlcpd trpgtpvdvf gcaaptpetr dsdadgipdi
       61 adlcpdtpan tvidafgcpl qidsdgdgvp dhqdpcpqtp pgaqvdasgc aidsdfdgvp
      121 dgldqcqgtq lglpadrvgc akdgsdrrgv dvrvelpgmp gvparatpta taqpaqpppt
      181 vtpptpslta aptassvpta tpqptfrgli vpspspspsp spspspspsp spspspspsp
      241 spspspspsp spspsptvpp sltptpslaa vtepaaeges pspspqatpg peivpqvsae
      301 svpvvpqatr meparpvkns vvagpapggt rvwrltfeag ndyevspeqv gglrqglepy
      361 reallrsgrg qvqlvgiatq tnevstarra rlsrgllmgl gvpgdriiya vrtaqpgeip
      421 gvievyvrgi eq
//
LOCUS       WP_235200918              98 aa            linear   BCT 02-MAR-2025
DEFINITION  flavodoxin domain-containing protein [Pseudomonas aeruginosa].
ACCESSION   WP_235200918
VERSION     WP_235200918.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 98)
  AUTHORS   Houwman,J.A. and van Mierlo,C.P.M.
  TITLE     Folding of proteins with a flavodoxin-like architecture
  JOURNAL   FEBS J 284 (19), 3145-3167 (2017)
   PUBMED   28380286
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024135.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12724.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..98
                     /product="flavodoxin domain-containing protein"
                     /calculated_mol_wt=10456
     Region          6..>74
                     /region_name="FldA"
                     /note="Flavodoxin [Energy production and conversion];
                     COG0716"
                     /db_xref="CDD:440480"
     Region          <41..>80
                     /region_name="WrbA"
                     /note="Multimeric flavodoxin WrbA, includes
                     NAD(P)H:quinone oxidoreductase [Energy production and
                     conversion]; COG0655"
                     /db_xref="CDD:440420"
ORIGIN      
        1 mskavvvyfs gyghtkrvaq aaaegaqasl ieidsegnip eaawdlldqa qsilfgapty
       61 mgsvpwqfkk fadatsrkwf vrqcgrtrss aasptaqa
//
LOCUS       WP_235201038             422 aa            linear   BCT 02-MAR-2025
DEFINITION  type 4b pilus protein PilO2 [Photorhabdus aegyptia].
ACCESSION   WP_235201038
VERSION     WP_235201038.1
KEYWORDS    RefSeq.
SOURCE      Photorhabdus aegyptia
  ORGANISM  Photorhabdus aegyptia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Photorhabdus.
REFERENCE   1  (residues 1 to 422)
  AUTHORS   Sakai,D. and Komano,T.
  TITLE     Genes required for plasmid R64 thin-pilus biogenesis:
            identification and localization of products of the pilK, pilM,
            pilO, pilP, pilR, and pilT genes
  JOURNAL   J Bacteriol 184 (2), 444-451 (2002)
   PUBMED   11751821
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018562.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06864.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Photorhabdus aegyptia"
                     /db_xref="taxon:2805098"
     gene            1..422
                     /gene="pilO2"
     Protein         1..422
                     /product="type 4b pilus protein PilO2"
                     /calculated_mol_wt=46157
     Region          10..419
                     /region_name="PAP_PilO"
                     /note="Pilin accessory protein (PilO); pfam06864"
                     /db_xref="CDD:429161"
ORIGIN      
        1 mqiklygktl vagiiwrppv tvltrshirr ngiaagftla vrhrvgrsiq vgyvpkeagv
       61 pgcyslaavl akavdkpnwi gafhlpdghy alvavhqgai magrdligtr eeieaklrdt
      121 vqlvegangv wnaiyapkef espwlevpla qllpqsalrk svgqlesltg emskhqikvf
      181 amtagtafll vggwwmwhiy kqnteirvpd lsnevvevpp phpwlaqptm asqfsawnka
      241 lakvplslag wqievimlda naisvsyqrh dgmpinvfqv aainifragp visnggeqaq
      301 vlipfeqsqs hdqennddvl qssdqalvel msyfqalglp pltltegasv lpppppplpe
      361 getrvwanpd wqtynwtlts qlapdalfsg kplpglrvts arivlsdgfp ewklsgvfya
      421 kn
//
LOCUS       WP_235201075              30 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: helix-turn-helix domain-containing protein
            [Photorhabdus].
ACCESSION   WP_235201075
VERSION     WP_235201075.1
KEYWORDS    RefSeq.
SOURCE      Photorhabdus
  ORGANISM  Photorhabdus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024776.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13384.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..30
                     /organism="Photorhabdus"
                     /db_xref="taxon:29487"
     Protein         1..30
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=3281
     Region          1..>30
                     /region_name="COG4584"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:443641"
ORIGIN      
        1 mkdegfgase iarqlginrs tvykilketr
//
LOCUS       WP_235201091              40 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Photorhabdus aegyptia].
ACCESSION   WP_235201091
VERSION     WP_235201091.1
KEYWORDS    RefSeq.
SOURCE      Photorhabdus aegyptia
  ORGANISM  Photorhabdus aegyptia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Photorhabdus.
REFERENCE   1  (residues 1 to 40)
  AUTHORS   Yang,W. and Steitz,T.A.
  TITLE     Crystal structure of the site-specific recombinase gamma delta
            resolvase complexed with a 34 bp cleavage site
  JOURNAL   Cell 82 (2), 193-207 (1995)
   PUBMED   7628011
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014814.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02796.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..40
                     /organism="Photorhabdus aegyptia"
                     /db_xref="taxon:2805098"
     Protein         1..40
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0000150 - DNA strand exchange activity
                     [Evidence IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /calculated_mol_wt=4534
     Region          <2..33
                     /region_name="HTH_CRP"
                     /note="helix_turn_helix, cAMP Regulatory protein
                     C-terminus; DNA binding domain of prokaryotic regulatory
                     proteins belonging to the catabolite activator protein
                     family; cl46859"
                     /db_xref="CDD:481199"
ORIGIN      
        1 mreikallrd pdiqvaevvr rygvsrttly khvgvitprq
//
LOCUS       WP_235201092             547 aa            linear   BCT 02-MAR-2025
DEFINITION  OPT/YSL family transporter [Photorhabdus aegyptia].
ACCESSION   WP_235201092
VERSION     WP_235201092.1
KEYWORDS    RefSeq.
SOURCE      Photorhabdus aegyptia
  ORGANISM  Photorhabdus aegyptia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Photorhabdus.
REFERENCE   1  (residues 1 to 547)
  AUTHORS   Lubkowitz,M.A., Barnes,D., Breslav,M., Burchfield,A., Naider,F. and
            Becker,J.M.
  TITLE     Schizosaccharomyces pombe isp4 encodes a transporter representing a
            novel family of oligopeptide transporters
  JOURNAL   Mol Microbiol 28 (4), 729-741 (1998)
   PUBMED   9643541
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015148.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03169.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Photorhabdus aegyptia"
                     /db_xref="taxon:2805098"
     Protein         1..547
                     /product="OPT/YSL family transporter"
                     /GO_function="GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=57801
     Region          25..534
                     /region_name="OPT"
                     /note="OPT oligopeptide transporter protein; cl14607"
                     /db_xref="CDD:449333"
ORIGIN      
        1 mgkesshqrm tnissphpra fsplmlvvli lvsslgsiig iqtlvtlgvt pstsiigalv
       61 amaiarlpiy qftlfrsvha qnlvqtsmss atfgaaisll aplgiayvme mpelimpilv
      121 gvslamlwda fllyrmfdsp vfpasgawpl gmataevikt tdrggyrtit licgvisgfi
      181 gsllglpmsa agiafiggfa amlsfaagll lapclyivfa ldistlrmpe gilvgagmva
      241 alqiglsmyk rkkrhitipa gghqhqidqp gassfrallg igslgyllla milalgtglf
      301 eqlslpmlig fvvfgtisal lhelivgiaa mntgwmpafg vallslvigi wigfpvkalv
      361 vltaftsatg pafadmgydl kagyilrgdn rdpifeqrgr reqmiagmlg fgiailavll
      421 twqdlfarnl fapvnlayaa aiktsidqsn lmtftgwvil gallqvigga rgqlgimlat
      481 glliakptvg wmvllglicr lwvkrkyrnh pshglesfag gmiagdalcs imlsthspav
      541 gqstdkh
//
LOCUS       WP_235200947            1410 aa            linear   BCT 02-MAR-2025
DEFINITION  TcdA/TcdB pore-forming domain-containing protein [Photorhabdus
            aegyptia].
ACCESSION   WP_235200947
VERSION     WP_235200947.1
KEYWORDS    RefSeq.
SOURCE      Photorhabdus aegyptia
  ORGANISM  Photorhabdus aegyptia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Photorhabdus.
REFERENCE   1  (residues 1 to 1410)
  AUTHORS   Barth,H., Pfeifer,G., Hofmann,F., Maier,E., Benz,R. and Aktories,K.
  TITLE     Low pH-induced formation of ion channels by clostridium difficile
            toxin B in target cells
  JOURNAL   J Biol Chem 276 (14), 10670-10676 (2001)
   PUBMED   11152463
REFERENCE   2  (residues 1 to 1410)
  AUTHORS   Qa'Dan,M., Spyres,L.M. and Ballard,J.D.
  TITLE     pH-induced conformational changes in Clostridium difficile toxin B
  JOURNAL   Infect Immun 68 (5), 2470-2474 (2000)
   PUBMED   10768933
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024322.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12920.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1410
                     /organism="Photorhabdus aegyptia"
                     /db_xref="taxon:2805098"
     Protein         1..1410
                     /product="TcdA/TcdB pore-forming domain-containing
                     protein"
                     /calculated_mol_wt=155082
     Region          116..291
                     /region_name="HopA1"
                     /note="HopA1 effector protein family; pfam17914"
                     /db_xref="CDD:436136"
     Region          772..948
                     /region_name="C58_PaToxP-like"
                     /note="peptidase C58 domain of Photorhabdus asymbiotica
                     toxin PaTox and LifA/Efa1-related large cytotoxin, and
                     similar proteins; cd20495"
                     /db_xref="CDD:410776"
     Site            order(789..792,840,880..882)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:410776"
     Region          1011..>1386
                     /region_name="TcdA_TcdB_pore"
                     /note="TcdA/TcdB pore forming domain; pfam12920"
                     /db_xref="CDD:463749"
ORIGIN      
        1 mpsnsyqsll asaqatfkem kskpkiqmli qeikkgfren grkwspqllq qqktleqtle
       61 gnayrrysnd rpvgissldk seqqafvgyi kalatrattv dilvqgnekt alasqtddal
      121 dnaeafrmlp kdfaqrysar gklgarltin vskvhfnvla raltqlfndd nrgwleqaki
      181 mgpknlgsrt dqaviylsra giehaqtisk klnellpata fvehtptgmy rvgkgisyse
      241 taaggssshg qsraqliaaa gtqslltdip iekalahtlq trgydvhnpa llsqalrdse
      301 lkgklvpmng dseprrgsad ihqfaadpvl faksniinae tlirsgnlpa egnvqlvkig
      361 sglyeldytd rsanndvate gansipayfl gydsanqana spayvdipkh aiagsflftg
      421 tlsggsvvvt nldantyrvy hdgrinssll ydnvvmavdy kdyqaaatte nlavaymqyv
      481 ndewqlalqr qeyrqdgqml rlklrdneep lsiqvadsqv iernqtqfvt yreqihqrlk
      541 kvaaqfgvsv egitdgvyte gefspdhpai aawsklraev ydkmnadtkq ladkrdklye
      601 errtssrhdl idqqikqini tleyykaqyd tilreagfve qswlwqqiks kdgmaavvri
      661 dntpvqnsgp ehtssvgery aiaetyqhrv hgtaftngqr hfrdinipgl ydrmsalemk
      721 slflkgqltp eqqgalsvhi tetsqaeyid kvlkwtavys edfhrigssf drlapqdfyl
      781 slvgdksggr cyplvramav alansgeagi nnlveklfla aadphassst llknsliklh
      841 snnieavqas takgqfklse vvsllkgatk tsmfalntpn hsmmvgstvg peghryyfyd
      901 pnvgifafnd avsfframkn hlvgrklaah ygspggeltp ifnlveidtg kmaevpvgnd
      961 lnvadltrpd elttvieqrr qveqavnaqv riakdarlht alatldaeqw garfaeastq
     1021 laqennldqr wmpvisnted qgegryrvqf inrdqpeetr wvssgdatft efrrfvdehm
     1081 ltlsqhftfe hgqirpknsv geaapvdgln agfaiqtliq wfadknrnda argiaspdla
     1141 talkvhsyln fvqmahgsvq diakvtalvr talrgevmaa etslkdftsi lghtvnegag
     1201 vlfggamvgl dayelahaen dvqkavfgtq lafdsasfvt gtagvgaglm gastagavlg
     1261 gagvilggla vgftalaqaf gavaedakav gryfntldda ykgngyrydn ekkvlvplpg
     1321 aviktldlrk nqidfdsqyi yrthsgstgs grinyffwig dfpkmvhdrs qaievrsgig
     1381 ykdasrciep qvmrnkknre lvkingnsrv
//
LOCUS       WP_235201130             362 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Photorhabdus aegyptia].
ACCESSION   WP_235201130
VERSION     WP_235201130.1
KEYWORDS    RefSeq.
SOURCE      Photorhabdus aegyptia
  ORGANISM  Photorhabdus aegyptia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Photorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Photorhabdus aegyptia"
                     /db_xref="taxon:2805098"
     Protein         1..362
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=41304
     Region          9..353
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mtsvhsrfdi riflkecsal qkehevsliv adgkgnevkn niaiidvgvl lgrlnrifkt
       61 tdkvykkale ldadlyhfhd pelipiglkl kkkgkivifd shedvpkqif skpylnkftr
      121 aiisklfsly ekystpkfdg iitatssird kflklnnnti dinnypilge lynenanwhe
      181 kekqvcyvgg isdirgitem veslsylttn ttmklagnfs dktlenkirs mknwqkidel
      241 gflnrtetke llsqsiagiv lyhplpnhid aqpnkifeym sagipviasn ftlwkdivvk
      301 nhcgicidpl npkeianaid ylsnnpdiae emgrngliai nekynwdieq nklhkfyqhi
      361 gr
//
LOCUS       WP_235201214            1106 aa            linear   BCT 02-MAR-2025
DEFINITION  tape measure protein [Pseudomonas aeruginosa].
ACCESSION   WP_235201214
VERSION     WP_235201214.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040129.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20155.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..1106
                     /product="tape measure protein"
                     /calculated_mol_wt=118069
     Region          <44..>211
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          191..882
                     /region_name="HI1514"
                     /note="Phage tail tape-measure protein, controls tail
                     length [Mobilome: prophages, transposons]; COG3941"
                     /db_xref="CDD:443141"
     Region          <942..>1048
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
ORIGIN      
        1 mttarrlagf fcqriamanp mqrliqfvlr grdelspaaq qstealeglr ttaanlnrql
       61 ddakgarglv talgtterai aqtqtsvqrv drtiadlrea ldrnpgsrgl avslqiaerd
      121 aaglrrtldq ltarhaeqqr aaraagvdtg qlaneerrla svvdntresi aqnsreirel
      181 eraqmraare aaghtsrvta lreamssgvr qaaayaaafv giqaalnlvr rgiglvrdgi
      241 vsmlttgdqf enlqnrltsl mgsvaegera tawiktfakd tplqlsdvtd afallkaygl
      301 dpmdgslkai edqseklggg merlegitta vgqawakqkl qteeilqlve rgvpvwdmla
      361 kvtgknaaql qdlaskgklg rdvikalvde mgrssegaaa kamstltglv snlgdtaadf
      421 lnrianagal dhvknklkel gdtiaqmdqd grldslakgl sdafvqgsew verfikrlad
      481 vdfgtlidkt sawlssfstq lddmasrvql fiapfrtlfn gvtsgisaia lawtgtmslm
      541 vagiekvaer ipaalggeri rssvagvhdl lssmsegfrq qiqqdaqdia dawdtsttat
      601 asaaqqqsqa itdtftdlka gaknaaaesv qavtslqnal dqisaaktte qltalqgeml
      661 kayqagtlsq qeyangagvl nakltelkst asgaalgvsd lstglenlkq vqdaissakt
      721 tvdiqnirta lgrlyndgti sarefnqeqt klsakvkelk aageegakgm qavaessdka
      781 akslsdqrka igesmeatrk gvastkddmg afegffggvl starqgvaql sqealnafda
      841 mrgistvdls idtssldats rslakvseql arikaesgvg msgfgrwamd tqrasleiqa
      901 ayleqkrslq slmddyergt mklgdfvsaa kgarnglsll ndsdmrqles aieaanqkiq
      961 qlkegskstl vslreelagl rgeqeavdrs rfnsrkaelq qqlaeaqgsg dmnavqnlmt
     1021 alatlqqiqa etdakrqree qqkrvdeqna akaaaappas ppassppprv vrfetargav
     1081 dvavaseqde tnllgvleqa smrtgr
//
LOCUS       WP_235201248             549 aa            linear   BCT 02-MAR-2025
DEFINITION  alkaline phosphatase family protein [Microbacterium sp. CH12i].
ACCESSION   WP_235201248
VERSION     WP_235201248.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. CH12i
  ORGANISM  Microbacterium sp. CH12i
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 549)
  AUTHORS   Wimalasekera,R., Pejchar,P., Holk,A., Martinec,J. and Scherer,G.F.
  TITLE     Plant phosphatidylcholine-hydrolyzing phospholipases C NPC3 and
            NPC4 with roles in root development and brassinolide signaling in
            Arabidopsis thaliana
  JOURNAL   Mol Plant 3 (3), 610-625 (2010)
   PUBMED   20507939
REFERENCE   2  (residues 1 to 549)
  AUTHORS   Saleh,M.T. and Belisle,J.T.
  TITLE     Secretion of an acid phosphatase (SapM) by Mycobacterium
            tuberculosis that is similar to eukaryotic acid phosphatases
  JOURNAL   J Bacteriol 182 (23), 6850-6853 (2000)
   PUBMED   11073936
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016101.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04185.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Microbacterium sp. CH12i"
                     /db_xref="taxon:1479651"
     Protein         1..549
                     /product="alkaline phosphatase family protein"
                     /GO_function="GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /calculated_mol_wt=60256
     Region          42..458
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
     Site            order(50,215,325,384..385)
                     /site_type="active"
                     /db_xref="CDD:293732"
     Site            order(50,215,325,385)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293732"
ORIGIN      
        1 mgaaaggaag aaigatagyr sgfaagddef dtlqprskpg fdhivvvmge nrsfdnllgh
       61 lytpdtlpeg qtfdgiafgd ysnvapdgtv ipahvydgpt dhvmglpnpd pgeefphvnt
      121 qlfeavspag nehlwvehmt apynapapgv tptnggfvqd yfinyrrlkk geapatdqle
      181 himggfspqm lpvlstlaqe favfdhwfsa vpsqtfcnrs ffhastshgf vtnkhdggye
      241 kwidapeapt ifnrleeagl swkvyydeiq lvsytgflha pvlekywktd hfatmdqffk
      301 dvkngdlpay afieprmtfn hndfhppfgv lredavdgvd vidsalsdvr agealihsiy
      361 saikdshsse gsnaintmll itfdehggty dhsappaavp phkgekgemg fafdrlgcrv
      421 paiavsaytr rgtvindemh hgsviktlce lhglkplthr dagandlssi vnleqprhpd
      481 dwpeitpqwv pktrkrthrt prthirtsrs arqpavswac frrdsaiqth rfprpsprht
      541 ssctstasa
//
LOCUS       WP_235201252             881 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Microbacterium sp. CH12i].
ACCESSION   WP_235201252
VERSION     WP_235201252.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. CH12i
  ORGANISM  Microbacterium sp. CH12i
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024991.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13604.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Microbacterium sp. CH12i"
                     /db_xref="taxon:1479651"
     Protein         1..881
                     /product="AAA family ATPase"
                     /calculated_mol_wt=95106
     Region          11..284
                     /region_name="TrwC"
                     /note="TrwC relaxase; cl19905"
                     /db_xref="CDD:450409"
     Region          335..827
                     /region_name="RecD"
                     /note="ATPase/5#-3# helicase helicase subunit RecD of the
                     DNA repair enzyme RecBCD (exonuclease V) [Replication,
                     recombination and repair]; COG0507"
                     /db_xref="CDD:440273"
ORIGIN      
        1 mphsavvevl enysgtggst varfvvedgv vssdelsagg lrvwltghdp vtgeqrgtsl
       61 mrpdadllld gtlnhpksys iaallhpdla aefealqdri rnrvialwqr elnarrghgg
      121 liresiarle vvelqhrrsr aldphahrhl wlnvkvrgdd gkwtnvdsrv amkfhtvina
      181 egelaartdp rwitaltrhg ytigadgeia elatavapms rrsaqietnr vrliaqweaa
      241 hsgtrpsvev lqqidrrawa varpnkpsll deqsweatvr eelatidaal ltsrmpraad
      301 lvgvddldld mlaaaavvda dlrstgssgr fshydlraga irvlsrsgvv adradfdavl
      361 rriadrarrl tvslssqpav pehvkslmar etmrlkirvg ealdaiatsg rsllpdelrr
      421 ragsvkaadc ldasqmaaac aiagsiglvt vigpagagkt tmlratlhal tsqrrrmlvv
      481 aptrkaasva sretgaeass vhallydygy rwstdptgsq vwrrleigqv dsatglnydg
      541 sqryslrlgd rivvdeagvl dlqaanalle laleagagva mvgdphqalp vghagamasa
      601 irhapasiel dtvhrfhdad yaaltlqlrn prdgahalel aerlyagrhl qrvdsveaar
      661 eamidgylda egrgqrvaiv cgtnsevdav naliqgrrie cgeldptrva agmgeqrllv
      721 gdavqtrrnd rrtgvdnraq wivsriepdf vdllspsdsg errrvsrdya lehvqlayas
      781 tvhgvqgetv dkaivgpdvd aaglyvgltr grhwnhavvv artdaaakss laatmlrgtt
      841 evtisdslra veaelrraar detmrpqgfg vagvstagms r
//
LOCUS       WP_235201278             271 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase [Microbacterium sp. CH12i].
ACCESSION   WP_235201278
VERSION     WP_235201278.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. CH12i
  ORGANISM  Microbacterium sp. CH12i
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 271)
  AUTHORS   Urbach,C., Evrard,C., Pudzaitis,V., Fastrez,J., Soumillion,P. and
            Declercq,J.P.
  TITLE     Structure of PBP-A from Thermosynechococcus elongatus, a
            penicillin-binding protein closely related to class A
            beta-lactamases
  JOURNAL   J Mol Biol 386 (1), 109-120 (2009)
   PUBMED   19100272
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024748.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13354.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Microbacterium sp. CH12i"
                     /db_xref="taxon:1479651"
     Protein         1..271
                     /product="serine hydrolase"
                     /GO_function="GO:0008800 - beta-lactamase activity
                     [Evidence IEA]"
                     /GO_process="GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=28597
     Region          2..269
                     /region_name="PenP"
                     /note="Beta-lactamase class A [Defense mechanisms];
                     COG2367"
                     /db_xref="CDD:441934"
ORIGIN      
        1 matlraleel tdagaqvsvh vtdldngsdv lvgddhitmp iaglgivpll ievaagfdsg
       61 sldplelvdr sstedvtgag iwrnlwaptl plgdlavlaa tagdpiavna llqrvgherv
      121 snliaalglt htalldrfrd rrgpddaphv avgttrelar lfsalvnska vdaavsaqvs
      181 ewlslnhdls lvaastgldp fahdhdehgl lfinktgrdr gvraeagvla gpragiayam
      241 ivcfddlsit hrlrahdafr vlglelmeya h
//
LOCUS       WP_235201316             503 aa            linear   BCT 02-MAR-2025
DEFINITION  family 20 glycosylhydrolase [Microbacterium sp. CH12i].
ACCESSION   WP_235201316
VERSION     WP_235201316.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. CH12i
  ORGANISM  Microbacterium sp. CH12i
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 503)
  AUTHORS   Tews,I., Perrakis,A., Oppenheim,A., Dauter,Z., Wilson,K.S. and
            Vorgias,C.E.
  TITLE     Bacterial chitobiase structure provides insight into catalytic
            mechanism and the basis of Tay-Sachs disease
  JOURNAL   Nat Struct Biol 3 (7), 638-648 (1996)
   PUBMED   8673609
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012931.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00728.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Microbacterium sp. CH12i"
                     /db_xref="taxon:1479651"
     Protein         1..503
                     /product="family 20 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=55208
     Region          4..126
                     /region_name="Glyco_hydro_20b"
                     /note="Glycosyl hydrolase family 20, domain 2; cl03741"
                     /db_xref="CDD:446174"
     Region          129..479
                     /region_name="GH20_SpHex_like"
                     /note="A subgroup of the Glycosyl hydrolase family 20
                     (GH20) catalytic domain found in proteins similar to the
                     N-acetylhexosaminidase from Streptomyces plicatus (SpHex).
                     SpHex catalyzes the hydrolysis of
                     N-acetyl-beta-hexosaminides. An Asp residue within the...;
                     cd06568"
                     /db_xref="CDD:119336"
     Site            order(140,228,309..310,361,389,391,438,440)
                     /site_type="active"
                     /db_xref="CDD:119336"
ORIGIN      
        1 mvlplvplpt svvespgrfs liagariiva neivdietda aasgladmle ertglrierv
       61 nnaaqagdiv lrrtaesgeh ymlqigdvtq iegsaaglfy giqtlrqllt sdgdrwtlph
      121 vdiddaprfe frgvmldvar tffdvstvka yidrasslkf nrlhlhltdd qgwrlqidsr
      181 llltergstt avlgrpggfy tkddfreive yaatnhmvvv peidlpghth aiglaypeiv
      241 eapvmndell kqstalnqpl pvagepyqgw gvghsivkvr deetwvflrd vltevaelta
      301 gpylhiggde algtphadfd tfitrvtalt lglgktpiaw heagsapgrr ghdrtvlgqh
      361 psrgsqaeda rrfaerggsv imspsntayl dqkydaefpl gldwaalidl etaydweptq
      421 iiaglspdai lgieaplwse tltsladidq lffpraaala evgwskferr ewasfrervg
      481 rlgavwdaag wgmhrpaeid wss
//
LOCUS       WP_235201338             262 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Microbacterium sp. CH12i].
ACCESSION   WP_235201338
VERSION     WP_235201338.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. CH12i
  ORGANISM  Microbacterium sp. CH12i
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Microbacterium sp. CH12i"
                     /db_xref="taxon:1479651"
     Protein         1..262
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=27334
     Region          <12..257
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mkhdrlhdhd qvavtiwdll aweapetlpk stvawqrgml rravryadav vvpshaiahr
       61 lgeiakvgnr vrviagaape gfavptdaag rradltipek yvvlvgtlas lehgfraaaa
      121 agvdavvlda pegsepqlae vasaaglper rahirgalsv edrsavlaga safvatsslg
      181 awpwrameam tlsvpivavd sgvhhdviae ggalvspgel dealtdavgt gakrlsvlag
      241 drsrafswas saervwalha dl
//
LOCUS       WP_235201366             224 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Microbacterium sp. CH12i].
ACCESSION   WP_235201366
VERSION     WP_235201366.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. CH12i
  ORGANISM  Microbacterium sp. CH12i
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Microbacterium sp. CH12i"
                     /db_xref="taxon:1479651"
     Protein         1..224
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=23603
     Region          17..>207
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mrsqraqpit sramlmlvva avgyalnfwa wallsplgpl ykdlltlsgs qqallvaipv
       61 lvgalgripv galtdrfggr imfpaisavs iipvlflgff gqtsyvalvi gafflgvagt
      121 ifavgvpfvn awfppekrgt avglygigmg gtaiaalttv hlwnnlgnas pflitsvala
      181 vyavvswmll rdspdrtvpt tsllsrlstt heapspgkrl sfmr
//
LOCUS       WP_235201387             261 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Microbacterium sp. CH12i].
ACCESSION   WP_235201387
VERSION     WP_235201387.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. CH12i
  ORGANISM  Microbacterium sp. CH12i
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 261)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 261)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Microbacterium sp. CH12i"
                     /db_xref="taxon:1479651"
     Protein         1..261
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=27246
     Region          4..>251
                     /region_name="MET17"
                     /note="O-acetylhomoserine/O-acetylserine sulfhydrylase,
                     pyridoxal phosphate-dependent [Amino acid transport and
                     metabolism]; COG2873"
                     /db_xref="CDD:442120"
ORIGIN      
        1 mtafstrqvq agyvpaavhn savppiyqta ayefaslada adifalrkag nlysrsaspt
       61 qqlleervaa leggtsavav asgqaavavt llalagrggh ivsasqlygg tvdlfqdtfd
      121 dfgisvtfvd qddadawraa irpetralfa esvanpiaqv ldirliadia heagaplvid
      181 ntvgtpylir pgehgadfvv hsatkflsgh gtslggvvvd qgsfdfgaqp ecwpqftaky
      241 prsvisycgt vsvsdrlsrp s
//
LOCUS       WP_235201395             480 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Microbacterium sp. CH12i].
ACCESSION   WP_235201395
VERSION     WP_235201395.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. CH12i
  ORGANISM  Microbacterium sp. CH12i
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Microbacterium sp. CH12i"
                     /db_xref="taxon:1479651"
     Protein         1..480
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=51200
     Region          11..431
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(21..22,25..26,29,67,125..126,128..130,133,153,
                     156..157,160,256,259..260,263..265,268,296,300,352..353,
                     357,361,377,380..381,384..385,388)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340924"
ORIGIN      
        1 mvkksrlrta isgtvvgnfm ewfdfgvygy lavtlttvft gdlegglgll ltlfgfaisf
       61 lvrplggfvl gplgdrigrq kvlfftmamm aaataligvl ptsaqiglwa vvplyllkmi
      121 qgfstggeya gattyvsefs pdrtrgywss fldvgsyigf aagasvvalt twivessaga
      181 dgmvdfgwri pflvaiplgv vaiwfrlkip etpafeaeqa savaedaesn dpmarqgllg
      241 ifrhhwrvil igialvsatn tagyaltsym ptyletevgv snlmaalatv pvlvvmsacl
      301 pligklsdki grrpvyaiav gstlvlmipa fmvmqigeew avlvalmmva ipvafyvais
      361 asalpalfpt asrfgamava ynlavslfgg ttplfsqali eltgntympa fyimffaalg
      421 gvalltmket aqrpllgsfp tvetreeave ivehqdenpf idtntmplpv ieppaepvgr
//
LOCUS       WP_235201403             302 aa            linear   BCT 02-MAR-2025
DEFINITION  type II secretion system F family protein [Microbacterium sp.
            CH12i].
ACCESSION   WP_235201403
VERSION     WP_235201403.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. CH12i
  ORGANISM  Microbacterium sp. CH12i
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 302)
  AUTHORS   Desvaux,M., Hebraud,M., Talon,R. and Henderson,I.R.
  TITLE     Secretion and subcellular localizations of bacterial proteins: a
            semantic awareness issue
  JOURNAL   Trends Microbiol 17 (4), 139-145 (2009)
   PUBMED   19299134
REFERENCE   2  (residues 1 to 302)
  AUTHORS   Desvaux,M., Parham,N.J., Scott-Tucker,A. and Henderson,I.R.
  TITLE     The general secretory pathway: a general misnomer?
  JOURNAL   Trends Microbiol 12 (7), 306-309 (2004)
   PUBMED   15223057
REFERENCE   3  (residues 1 to 302)
  AUTHORS   Peabody,C.R., Chung,Y.J., Yen,M.R., Vidal-Ingigliardi,D.,
            Pugsley,A.P. and Saier,M.H.
  TITLE     Type II protein secretion and its relationship to bacterial type IV
            pili and archaeal flagella
  JOURNAL   Microbiology (Reading) 149 (Pt 11), 3051-3072 (2003)
   PUBMED   14600218
REFERENCE   4  (residues 1 to 302)
  AUTHORS   Py,B., Loiseau,L. and Barras,F.
  TITLE     An inner membrane platform in the type II secretion machinery of
            Gram-negative bacteria
  JOURNAL   EMBO Rep 2 (3), 244-248 (2001)
   PUBMED   11266368
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012694.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00482.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Microbacterium sp. CH12i"
                     /db_xref="taxon:1479651"
     Protein         1..302
                     /product="type II secretion system F family protein"
                     /calculated_mol_wt=31246
     Region          25..129
                     /region_name="T2SSF"
                     /note="Type II secretion system (T2SS), protein F;
                     pfam00482"
                     /db_xref="CDD:425708"
     Region          <89..156
                     /region_name="TadB"
                     /note="Flp pilus assembly protein TadB [Intracellular
                     trafficking, secretion, and vesicular transport,
                     Extracellular structures]; COG4965"
                     /db_xref="CDD:443991"
     Region          <237..295
                     /region_name="TadC"
                     /note="Flp pilus assembly protein TadC [Extracellular
                     structures]; COG2064"
                     /db_xref="CDD:441667"
ORIGIN      
        1 mvklgwmkrq tpagagaeea avavrtlavl lqagavplna wrhlaesgdv haervverca
       61 egvplvaaie aeegawadva aawdvattvg aplaevlrsl aetmrdtasa addvrialae
      121 pagtarlllw mpfaglllgf algfdtvsvl vgnpigtgcl vaglllvlaa rgwtrkllrh
      181 aqpatetpgm haelvavals ggasierslr lvddspardr vsdthtrgvl elsraagvpa
      241 gellrasaaq erhdarvrgr vraaklssql liplgvctlp aflllgvapl mlavlsstpl
      301 pi
//
LOCUS       WP_235201408             297 aa            linear   BCT 02-MAR-2025
DEFINITION  polysaccharide deacetylase family protein [Microbacterium sp.
            CH12i].
ACCESSION   WP_235201408
VERSION     WP_235201408.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. CH12i
  ORGANISM  Microbacterium sp. CH12i
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 297)
  AUTHORS   Freiberg,C., Fellay,R., Bairoch,A., Broughton,W.J., Rosenthal,A.
            and Perret,X.
  TITLE     Molecular basis of symbiosis between Rhizobium and legumes
  JOURNAL   Nature 387 (6631), 394-401 (1997)
   PUBMED   9163424
REFERENCE   2  (residues 1 to 297)
  AUTHORS   Mishra,C., Semino,C.E., McCreath,K.J., de la Vega,H., Jones,B.J.,
            Specht,C.A. and Robbins,P.W.
  TITLE     Cloning and expression of two chitin deacetylase genes of
            Saccharomyces cerevisiae
  JOURNAL   Yeast 13 (4), 327-336 (1997)
   PUBMED   9133736
REFERENCE   3  (residues 1 to 297)
  AUTHORS   Millward-Sadler,S.J., Poole,D.M., Henrissat,B., Hazlewood,G.P.,
            Clarke,J.H. and Gilbert,H.J.
  TITLE     Evidence for a general role for high-affinity non-catalytic
            cellulose binding domains in microbial plant cell wall hydrolases
  JOURNAL   Mol Microbiol 11 (2), 375-382 (1994)
   PUBMED   8170399
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013672.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01522.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Microbacterium sp. CH12i"
                     /db_xref="taxon:1479651"
     Protein         1..297
                     /product="polysaccharide deacetylase family protein"
                     /GO_function="GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=33378
     Region          28..175
                     /region_name="CE4_SF"
                     /note="Catalytic NodB homology domain of the carbohydrate
                     esterase 4 superfamily; cl15692"
                     /db_xref="CDD:472828"
ORIGIN      
        1 mnhiattgfy lptwdelsaf idgrlylpnh svvitdddad qswfdlavpv iekyqvlsts
       61 fmitaarqdp apspfvqrrs hthnmhqaga ngqgqmvnls aeeiaadlnt sgdilgvrev
      121 vaypyghynd takqgvamag yemartiepg yvsigtdkfa lpvvrinygm glealinqia
      181 damvrrqiff erlvrsarrc eaefffqpri rqhrtvpeer hllgavhghs qhpscaqrrr
      241 qecggdrqhr laepsrdlgy gdptitcdve dsrwavgrrp hhgrrdiidp heheegv
//
LOCUS       WP_235201440             332 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase [Microbacterium sp. CH12i].
ACCESSION   WP_235201440
VERSION     WP_235201440.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. CH12i
  ORGANISM  Microbacterium sp. CH12i
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 332)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 332)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Microbacterium sp. CH12i"
                     /db_xref="taxon:1479651"
     Protein         1..332
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=34653
     Region          2..300
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     Site            order(17..19,50,55,80,121,151..152,171,199..205,256,
                     273..276,281,284..285)
                     /site_type="active"
                     /db_xref="CDD:381302"
     Site            order(50,55,80,121)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381302"
ORIGIN      
        1 mtlsmggpra lprmglgcmn lshaygvpps dedglallrt aldegvthld tatlygggrn
       61 eelvgralrg rrdevvlask ggmanvdgsk vidgrpstlr aqvdaslgrl gvdhidlyyl
      121 hrwdktvpig esvgalaslv eegkigaigl sevsvdrlre aqavapiavv qneyslwsrn
      181 pelgmlaata aagialvafs pvargflgds vgdpnalaek dirramprfq psnwpanaal
      241 lpgwralaae agctpaqlal vwllsrgnhv vpipgttsig hlrdnfaaes lsvdsaller
      301 agelidtttv sgpryapgpa aevdaetfed aa
//
LOCUS       WP_235201496             435 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Microbacterium sp. CH12i].
ACCESSION   WP_235201496
VERSION     WP_235201496.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. CH12i
  ORGANISM  Microbacterium sp. CH12i
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 435)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Microbacterium sp. CH12i"
                     /db_xref="taxon:1479651"
     Protein         1..435
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=45848
     Region          10..435
                     /region_name="PRK07906"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:181163"
ORIGIN      
        1 mtpleseale fvrdlirids vntgdlstig dgetraarfv qskledvgia ttfveptpgr
       61 gsvvarisgt dpdaaalivh ahldvvpvqa ddwthppfga eiedgllygr gavdmknfag
      121 vilavarhfa rsgirprrdl ifafladees ggvwgaswlv dnrpelftga seaisevggf
      181 svplvegrra yllataekgv gsvrltarge aghasrplps davpqlagav arigahrfpv
      241 vrtpalarfl qvfghargvv fsdanldael edlgfvgrvi aaaarntaap tvlragdksn
      301 iipasaeaii dyralpdgea ellaelsrls gptvevegfr smdpiaspvd gdlvdaitaa
      361 igeedpdgvv vpyllpastd nkhfarlgvn gygfvplrvp ddfdvygqfh sadecvpvea
      421 lyfsarvtag ilena
//
LOCUS       WP_235201527             105 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding enzyme [Microbacterium sp. CH12i].
ACCESSION   WP_235201527
VERSION     WP_235201527.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. CH12i
  ORGANISM  Microbacterium sp. CH12i
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024591.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13193.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Microbacterium sp. CH12i"
                     /db_xref="taxon:1479651"
     Protein         1..105
                     /product="AMP-binding enzyme"
                     /calculated_mol_wt=11611
     Region          <2..84
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
ORIGIN      
        1 mllehdlvve aavipspdpt rlsvpkayvc lradaatsee daaraiyvfa herlsahlrv
       61 riiefvpelp ktisgkirrv dlrareaerv atgnaagqhl drdyr
//
LOCUS       WP_235201526             446 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Microbacterium sp. CH12i].
ACCESSION   WP_235201526
VERSION     WP_235201526.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. CH12i
  ORGANISM  Microbacterium sp. CH12i
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 446)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Microbacterium sp. CH12i"
                     /db_xref="taxon:1479651"
     Protein         1..446
                     /product="AMP-binding protein"
                     /calculated_mol_wt=48736
     Region          45..>421
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(175,178..183,185..186)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(178,293..294,315..320,400,412,415)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
ORIGIN      
        1 msgfawpeld efnfglewfd vvagenpdrp avqivsadlt lqswtyadls grsdqvaswl
       61 relgigrsdh livmlnntie lwevmlgitk vgavsiptst llsasdlayr vehgearavi
      121 tlgaladrls diddrvirig tgevpagwhd fadstsapte fepdgatpas dtgllyftsg
      181 ttsrpklvqh tqvsypvghl stmwwlglrp gdvhlnissp gwgkhawssf yspflagatv
      241 fvfnydrfda ntlmqvmdth hvstfcappt vwrmliqadl srlthpprel vgageplnpe
      301 visrvreawg gtirdgfgqt emtccvgnsp gqvvkdgsmg ralpgypvvl ldpvtgelae
      361 negeialdla qpplglmagy ygdpektaes raggyhhtgd iasrdsdgyl tyvgraddvf
      421 krrttrsrrl ssnrcclnmt swsrrr
//
LOCUS       WP_235201538             328 aa            linear   BCT 02-MAR-2025
DEFINITION  VWA domain-containing protein [Microbacterium sp. CH12i].
ACCESSION   WP_235201538
VERSION     WP_235201538.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. CH12i
  ORGANISM  Microbacterium sp. CH12i
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 328)
  AUTHORS   Bork,P. and Rohde,K.
  TITLE     More von Willebrand factor type A domains? Sequence similarities
            with malaria thrombospondin-related anonymous protein,
            dihydropyridine-sensitive calcium channel and inter-alpha-trypsin
            inhibitor
  JOURNAL   Biochem J 279 (Pt 3) (Pt 3), 908-910 (1991)
   PUBMED   1659389
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012321.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00092.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Microbacterium sp. CH12i"
                     /db_xref="taxon:1479651"
     Protein         1..328
                     /product="VWA domain-containing protein"
                     /calculated_mol_wt=35242
     Region          99..276
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(106,191,216)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
ORIGIN      
        1 malanwwiil iavavivvav viglliglrr narhralpsa qiaraervra lpsfqhavrr
       61 rtialagvla lgviatvigg vvaarpmsse tiqpvntsrd imlcldvsgs msevdvevls
      121 vfeellngle gerigltifn sspvqvfplt ddydfirthl asiresfdyi eeipehwvgt
      181 lngpgaslvg dglascvmrf dhvddersrs iilatdnevn gdsivslqea adyaasvgvr
      241 vfalnpvqgv ntaiseelit aaqttggeay glrdtttvgd ivadiqeqda tqlrgqaqvv
      301 wtdtpnvwia lllvaglgfl vllwrvrl
//
LOCUS       WP_235201635              39 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ABC transporter permease [unclassified
            Paenibacillus].
ACCESSION   WP_235201635
VERSION     WP_235201635.1
KEYWORDS    RefSeq.
SOURCE      unclassified Paenibacillus
  ORGANISM  unclassified Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 39)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024141.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12730.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..39
                     /organism="unclassified Paenibacillus"
                     /db_xref="taxon:185978"
     Protein         1..39
                     /product="ABC transporter permease"
                     /calculated_mol_wt=4429
     Region          <6..>39
                     /region_name="ABC2_membrane"
                     /note="ABC-2 type transporter; cl21474"
                     /db_xref="CDD:473876"
ORIGIN      
        1 mtswtfgrey sdrtlkdllv lpisrgkiai akyvaiifw
//
LOCUS       WP_235201650             230 aa            linear   BCT 02-MAR-2025
DEFINITION  redoxin family protein [Vibrio fortis].
ACCESSION   WP_235201650
VERSION     WP_235201650.1
KEYWORDS    RefSeq.
SOURCE      Vibrio fortis
  ORGANISM  Vibrio fortis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020123.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08534.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Vibrio fortis"
                     /db_xref="taxon:212667"
     Protein         1..230
                     /product="redoxin family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=25166
     Region          78..225
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 mklnrttitn lsdlfksskn klkltkhnal flmsalaiss tveaaqfstt sdnaptgsnq
       61 tltmfqdttf nlvgeslsvg dklpsvalms ntnqaydtsa enknvrifsv lasvdtpvcd
      121 qqiqdlskfv einkqllani dfvglsadtt faldrfkkek nlsdnlllls dakdhafgfk
      181 tgtqinelgl larttfvvdk nntivylqrv pelttipdle kavevakkhl
//
LOCUS       WP_235201713             282 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Vibrio fortis].
ACCESSION   WP_235201713
VERSION     WP_235201713.1
KEYWORDS    RefSeq.
SOURCE      Vibrio fortis
  ORGANISM  Vibrio fortis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 282)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Vibrio fortis"
                     /db_xref="taxon:212667"
     Protein         1..282
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=32697
     Region          57..264
                     /region_name="EAL"
                     /note="EAL domain. This domain is found in diverse
                     bacterial signaling proteins. It is called EAL after its
                     conserved residues and is also known as domain of unknown
                     function 2 (DUF2). The EAL domain has been shown to
                     stimulate degradation of a second...; cl29561"
                     /db_xref="CDD:453023"
ORIGIN      
        1 mkistqsfvr strlvdekvm hiddtennin slknnmyeyn ytdsgvivrs dasfvklefl
       61 fqpiidlkqr qvrhleilsk vlsdsgeicy netffseidq efikmvalaq ikfcsdlkvh
      121 ipitvnmtls clkdrfflqs llnerdvnfd ieitdidcdv ncgrlqssir llkrsgvgll
      181 lddyyhknnv anislgfidw dyikidksfl hhncddinti nyllrvispy akkgiilegv
      241 etsyqhdvvk nlnvlvqgyf ysppvswtql krkmnimnke hv
//
LOCUS       WP_235201531             394 aa            linear   BCT 02-MAR-2025
DEFINITION  chaplin family protein [Microbacterium sp. CH12i].
ACCESSION   WP_235201531
VERSION     WP_235201531.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. CH12i
  ORGANISM  Microbacterium sp. CH12i
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 394)
  AUTHORS   Dragos,A., Kovacs,A.T. and Claessen,D.
  TITLE     The Role of Functional Amyloids in Multicellular Growth and
            Development of Gram-Positive Bacteria
  JOURNAL   Biomolecules 7 (3), 60 (2017)
   PUBMED   28783117
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 394)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015718.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03777.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Microbacterium sp. CH12i"
                     /db_xref="taxon:1479651"
     Protein         1..394
                     /product="chaplin family protein"
                     /calculated_mol_wt=37060
     Region          128..>348
                     /region_name="Chi1"
                     /note="Chitinase [Carbohydrate transport and metabolism];
                     COG3469"
                     /db_xref="CDD:442692"
ORIGIN      
        1 mrrvlwgvlv aggitllgat aanaaetdge dsilsgtqai ipvsipvdit graiallgts
       61 svdapapepa avaeptatdp vattsgtdgv asgtqavitv dvpvtiqnta vsllgsssts
      121 tppadpqtea pqasapaagv psvttsgtds llggsqallq vnvpvnvsgn aisvlgtsdv
      181 aaseesaapa sstpapltgt tdattpeavt dgtdgvasgt qviapvtapv avlgnaisvl
      241 gtsdvtggga gtpasppaag gdiltsgvgs ilggsqiaap lsipltiggn aisvvgtstv
      301 tdpgpgttpg tdpgtdpgtd pgtdpgtdpg nnpgtdpgtn pnpgtvpsgn gsaimatapr
      361 laatggssdl aptvlaallm llgaglllrr rtmq
//
LOCUS       WP_235201620             229 aa            linear   BCT 02-MAR-2025
DEFINITION  G1 family glutamic endopeptidase [Paenibacillus sp. FSL H8-457].
ACCESSION   WP_235201620
VERSION     WP_235201620.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL H8-457
  ORGANISM  Paenibacillus sp. FSL H8-457
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Jensen,K., Ostergaard,P.R., Wilting,R. and Lassen,S.F.
  TITLE     Identification and characterization of a bacterial glutamic
            peptidase
  JOURNAL   BMC Biochem 11, 47 (2010)
   PUBMED   21122090
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01828.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Paenibacillus sp. FSL H8-457"
                     /db_xref="taxon:1227351"
     Protein         1..229
                     /product="G1 family glutamic endopeptidase"
                     /GO_function="GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=25091
     Region          30..225
                     /region_name="Peptidase_G1"
                     /note="Peptidases of the G1 family, including
                     scytalidoglutamic peptidase and aspergillopepsin; cd13426"
                     /db_xref="CDD:240449"
     Site            order(32..33,37,67,69,74,82,86,99,101,163,165..166,209)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:240449"
     Site            order(69,82,101,163,166)
                     /site_type="active"
                     /db_xref="CDD:240449"
ORIGIN      
        1 mmgisttgqw nhtcqldtsa kprrnigwis snwsgysitg kkgafkrvsa kwnvpfvrps
       61 rgtsyssawi gidgfsnskl iqtgtghdwi dgkayyyaww eilpasvtii plpiqpgdrm
      121 hasiikcsgs nwliclrnvs rnwtfrtlqr yggpqtsaew iveapqinga latmarlspv
      181 vfsccrvngk rpkltaddgg imlqnstvts ipsnpnragd gfvvkgvhq
//
LOCUS       WP_235201772             246 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: Spo0B domain-containing protein [Bacillales].
ACCESSION   WP_235201772
VERSION     WP_235201772.1
KEYWORDS    RefSeq.
SOURCE      Bacillales
  ORGANISM  Bacillales
            Bacteria; Bacillati; Bacillota; Bacilli.
REFERENCE   1  (residues 1 to 246)
  AUTHORS   Varughese,K.I., Madhusudan, Zhou,X.Z., Whiteley,J.M. and Hoch,J.A.
  TITLE     Formation of a novel four-helix bundle and molecular recognition
            sites by dimerization of a response regulator phosphotransferase
  JOURNAL   Mol Cell 2 (4), 485-493 (1998)
   PUBMED   9809070
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026040.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14689.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Bacillales"
                     /db_xref="taxon:1385"
     Protein         1..246
                     /product="Spo0B domain-containing protein"
                     /calculated_mol_wt=27559
     Region          69..244
                     /region_name="Spo0B"
                     /note="Stage 0 sporulation initiation phosphotransferase
                     Spo0B [Cell cycle control, cell division, chromosome
                     partitioning, Signal transduction mechanisms]; COG5802"
                     /db_xref="CDD:444504"
ORIGIN      
        1 mkswkwiaav agltsvipva wvvwkpslaa gavltawava asacgawlvr ksderrqqai
       61 irnmeqtaiq mlnhhrhdwm nelqilygyi qlgkldktvg sverikdrma tesrisklgi
      121 pslvfylhsy rtyssnlqlc vevvdqvqle dkvspqtaes fteaiiqtvr afqlsgtasw
      181 gdtrqltltf mqqeqelivw algegsfgdp eglklqieqs vkgegirveq tepgetsyrl
      241 ylpfvt
//
LOCUS       WP_235201789             514 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF5605 domain-containing protein [Bacillales].
ACCESSION   WP_235201789
VERSION     WP_235201789.1
KEYWORDS    RefSeq.
SOURCE      Bacillales
  ORGANISM  Bacillales
            Bacteria; Bacillati; Bacillota; Bacilli.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036763.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18310.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Bacillales"
                     /db_xref="taxon:1385"
     Protein         1..514
                     /product="DUF5605 domain-containing protein"
                     /calculated_mol_wt=59074
     Region          30..98
                     /region_name="DUF5060"
                     /note="Domain of unknown function (DUF5060); pfam16586"
                     /db_xref="CDD:435443"
     Region          130..406
                     /region_name="DUF4038"
                     /note="Protein of unknown function (DUF4038); pfam13204"
                     /db_xref="CDD:463808"
     Region          439..510
                     /region_name="DUF5605"
                     /note="Domain of unknown function (DUF5605); pfam18310"
                     /db_xref="CDD:465703"
ORIGIN      
        1 myneenshpa glfgglamrk erqrviynkt vgrwavfeta invdetlenp fsgvqleaaf
       61 rsgertvkan gfydgdgvyk irfmpdavgp wtfltssnvp aldaltgkfe ctdagagnhg
      121 pvrvasrdsf eyadgspyip fgttcyawvh qneplqaetl ealrnspfnk irmcvfpkry
      181 tfnvtepalf afpgskedgf dlerfeprff qglerrieql aelgieadvi lfhpydkghw
      241 gfdrmspdrd efylryviar laayrnvwws laneydfmre krkedwdrlf qivqendpyg
      301 hlrsihngtk mydptsldly dhskpwvdhv slqhwdltav dsirraygkp vvvdeccyeg
      361 diprrwgnit geemthrfwe gtvrgayvgh getymhpeni iwwshggelh gtspdrigfl
      421 rkvledaprh ltvidtikdv palgkqedyy llyfgihrpi vrpvqlseda aytaevidtw
      481 nmtiepiegt fsgdcaislp grpylalrir rsmq
//
LOCUS       WP_235201807             411 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: RICIN domain-containing protein [unclassified
            Paenibacillus].
ACCESSION   WP_235201807
VERSION     WP_235201807.1
KEYWORDS    RefSeq.
SOURCE      unclassified Paenibacillus
  ORGANISM  unclassified Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025563.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14200.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="unclassified Paenibacillus"
                     /db_xref="taxon:185978"
     Protein         1..411
                     /product="RICIN domain-containing protein"
                     /calculated_mol_wt=45254
     Region          25..261
                     /region_name="BglS"
                     /note="Beta-glucanase, GH16 family [Carbohydrate transport
                     and metabolism]; COG2273"
                     /db_xref="CDD:441874"
     Region          272..405
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cd00161"
                     /db_xref="CDD:467293"
     Site            order(286..288,299,301,308..309)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(333..334,346,348,355..356)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(380..382,393,395,402..403)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
ORIGIN      
        1 mmlrklicvv llfsllvvll pvnktnaapn wnlvwsdefn gtslnrsnwt peigtgsggw
       61 gnnelqyytd raqnlqvsgg nlvitaqkes yggmnytsar iktqdlksft ygkvearikl
      121 psgqglwpaf wmlgsnistv gwpksgeidi mervnlnpyv ngtvhwdagg haefgrvsgn
      181 ldfsqfhvys iewdskyirw fvdgqqfnef yiengtgnte efqrpfflll nlavggnwpg
      241 spnnstpfps qmlvdyvrvy qdtgasnvis dgiytiaska sgkvmdvvdv stvsgakiqq
      301 wtnyvannqr frvestgdgy ykltavhsgk vldvpnssts tgvqlqqwnd ngtdaqrwri
      361 idvgggyykl vskasglavd vasastadga avqqwtdngt daqkwaftki n
//
LOCUS       WP_235201834              88 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DinB family protein [Bacillales].
ACCESSION   WP_235201834
VERSION     WP_235201834.1
KEYWORDS    RefSeq.
SOURCE      Bacillales
  ORGANISM  Bacillales
            Bacteria; Bacillati; Bacillota; Bacilli.
REFERENCE   1  (residues 1 to 88)
  AUTHORS   Cooper,D.R., Grelewska,K., Kim,C.Y., Joachimiak,A. and
            Derewenda,Z.S.
  TITLE     The structure of DinB from Geobacillus stearothermophilus: a
            representative of a unique four-helix-bundle superfamily
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 66 (Pt 3), 219-224
            (2010)
   PUBMED   20208147
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024273.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12867.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Bacillales"
                     /db_xref="taxon:1385"
     Protein         1..88
                     /product="DinB family protein"
                     /calculated_mol_wt=10096
     Region          <15..78
                     /region_name="DinB_2"
                     /note="DinB superfamily; cl46334"
                     /db_xref="CDD:480674"
ORIGIN      
        1 mnrsiifkas eqamptgils ydeamdklnr vrettkqiit klaerntndl hdphpygfel
       61 naaqwahfia ihetlhirkl grireanq
//
LOCUS       WP_235201836             353 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: S-layer homology domain-containing protein
            [Paenibacillus].
ACCESSION   WP_235201836
VERSION     WP_235201836.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus
  ORGANISM  Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae.
REFERENCE   1  (residues 1 to 353)
  AUTHORS   Mesnage,S., Fontaine,T., Mignot,T., Delepierre,M., Mock,M. and
            Fouet,A.
  TITLE     Bacterial SLH domain proteins are non-covalently anchored to the
            cell surface via a conserved mechanism involving wall
            polysaccharide pyruvylation
  JOURNAL   EMBO J 19 (17), 4473-4484 (2000)
   PUBMED   10970841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012613.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00395.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Paenibacillus"
                     /db_xref="taxon:44249"
     Protein         1..353
                     /product="S-layer homology domain-containing protein"
                     /calculated_mol_wt=40199
ORIGIN      
        1 meyrtktlgr mvtkadltlm vhrlftdfrv eadkkfdipg vpnghpsyqi fkdvygsips
       61 apngligaad rinygdetfk yipekvltrw dllitlntlf ddigyslelp dgediarlra
      121 ikdlpkryfn sykqydkwky ayqplapeig lmqdkkygps lasdldyvka yallgfaeag
      181 imkpdargyf rpnqkvtlae tavvlhriyd yfdggsyvre pspddlipng tryfiykdsp
      241 sahgaspvsd falvnsdalp efylalkate kidlqinvng epsyytyeql snpkqpvrip
      301 lngayyaefi piirskgqka tgennnievm yyyadtfqdf tqaiwyepnl qlk
//
LOCUS       WP_235201853            1251 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: stalk domain-containing protein [unclassified
            Paenibacillus].
ACCESSION   WP_235201853
VERSION     WP_235201853.1
KEYWORDS    RefSeq.
SOURCE      unclassified Paenibacillus
  ORGANISM  unclassified Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 1251)
  AUTHORS   Wilmot,C.M., Hajdu,J., McPherson,M.J., Knowles,P.F. and
            Phillips,S.E.
  TITLE     Visualization of dioxygen bound to copper during enzyme catalysis
  JOURNAL   Science 286 (5445), 1724-1728 (1999)
   PUBMED   10576737
REFERENCE   2  (residues 1 to 1251)
  AUTHORS   Parsons,M.R., Convery,M.A., Wilmot,C.M., Yadav,K.D., Blakeley,V.,
            Corner,A.S., Phillips,S.E., McPherson,M.J. and Knowles,P.F.
  TITLE     Crystal structure of a quinoenzyme: copper amine oxidase of
            Escherichia coli at 2 A resolution
  JOURNAL   Structure 3 (11), 1171-1184 (1995)
   PUBMED   8591028
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019450.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07833.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1251
                     /organism="unclassified Paenibacillus"
                     /db_xref="taxon:185978"
     Protein         1..1251
                     /product="stalk domain-containing protein"
                     /calculated_mol_wt=133647
     Region          26..378
                     /region_name="NHL"
                     /note="NHL repeat unit of beta-propeller proteins;
                     cl18310"
                     /db_xref="CDD:302697"
     Region          50..101
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          114..152
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          168..203
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          232..273
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          302..331
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          353..378
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          413..510
                     /region_name="Cu_amine_oxidN1"
                     /note="Copper amine oxidase N-terminal domain; pfam07833"
                     /db_xref="CDD:400265"
     Region          536..>670
                     /region_name="COG4254"
                     /note="Uncharacterized peptidoglycan binding protein,
                     contains LysM and FecR domains [General function
                     prediction only]"
                     /db_xref="CDD:443396"
     Region          <730..>921
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
ORIGIN      
        1 maastaplps kerlvagngl plgqsttiag gpghaaglss slaseglrqp gsvawlrdgs
       61 vivsdtenhv irkikdgkss ilagaslsyk rdggglpigg lldgqgelaf lnrpsgiavd
      121 gkgqvyiads gnhairkidq agrvttiagn griglkdgka qdalfhepqd vavtedgily
      181 vadtlnhvir rispdgevtt igspstravq vragvialag dykngslaea qfnepaglal
      241 dgkgnlyvsd sgnhairyid fgkgtvstaa gsgpssdgyt kdalyadpgy ldgaagaarf
      301 nsprglawsv edglliadsh nhavrqlkde rvstmaggtr gyadgiesev rfnapadigv
      361 asdsgelfia dqrngavraw ssyktpdawq pgqgiaaayg dqvaqlgdla vmkqgqivvp
      421 vrtlgtllgt rlsydaknke mtltlgedvi tlqagdpymt rdqagkevsr aatevepyia
      481 ngqmmaplra vaelmgkdvq wnastklvii rdlaeretkp gnvsfstsnf tprrmqvvei
      541 tgsaklrygg yaqvdaykgm mlgeddemvt gsgtggaklr ildtedvitl gndttlvveq
      601 lrkigisnvt rlnleagqay ydvtdlarst drfdvrtgya dnsvqgthfi itvnpltgmt
      661 nvvtasgkvs sslvptgteg sllpsgpvti sptqqislgg sqegrppvqf idiedlmgna
      721 spgiiaqiik nkndidrene eflektrqel qsgesgtgtq dlimkspddl akvadnlnnl
      781 igniakeald kkkasqeeld klmkeanpds gkifdlgqvk dldkqagldp aleqarleal
      841 krkqeevqkk qdqqqnqldq lqeklgdmla kieqqkkqqd eanrkaqeem kkkaeeqllq
      901 slnaeekarf lqgkkeaeqe kgvrqpppvs pgggsgsggs vsppvtgppv teppvteppv
      961 tepptteppv tdpfvkviys ddmrselsar pdnyfgsihf etkgydddme vqvrvtltrd
     1021 gipveglpvr hgeqtvesnt egsfalqsvd gtgfklseva spdtplefya ellepggyte
     1081 kielleikeg qltvlgegvr siqvspfsqf efigegpfpa aldmywgfss kayglsedtr
     1141 vgyeltildd hgqpvslgvl gfrmkphepg tiptegyeia tpdregvyrv nagltagdmd
     1201 lggngsdilf rwqqahvgty tlriqlvdin sdmsvpigep lewiievipt s
//
LOCUS       WP_235201941             980 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Bordetella holmesii].
ACCESSION   WP_235201941
VERSION     WP_235201941.1
KEYWORDS    RefSeq.
SOURCE      Bordetella holmesii
  ORGANISM  Bordetella holmesii
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..980
                     /organism="Bordetella holmesii"
                     /db_xref="taxon:35814"
     Protein         1..980
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=102555
     Region          <52..490
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          <321..760
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 msfpngesia akaddqgmfk vrskrevkqg qvvvqathpq tgmrvststh yqppsvqapt
       61 ietvvteakt grvtvtgkad pgarvdvrfp dgssqrtvag kdgmyqvvsa gdmvsgdira
      121 qatgqdgsts pvavqaydda qdttppeape irlittddas grvavngrae rgadvtvnfp
      181 dgtvqrvvaa ddgsyrvvse tdmvagdiqv vaadaagnks avsthryvdv vdktapaapi
      241 itavtenpad grltvagkae pgaqidivfp dgtlaqvvag ddgsyeatst rdmvsggidv
      301 rakdkvgnls evttrhfddr vdktapaept ittvvtdpat grvtvsgkte pkaqvtvsfp
      361 dstvaqgvag ddgmfsvtsa gdmvggdirv qavdqagnqs pqarqrydda pdttppapps
      421 itsvvtdpkt grvtvkgsse agaevtvtfp ggasqkvrag adgsysaksa edvmtgtiqv
      481 eaadlagnks prmtheymdt vdktapdvdi drleedrstg rvtvigtgep garvmvtfpd
      541 dstktgdida sgnfrvesdn dletgyievt sqdkagntsr vsrvlhtdkv dktapaapii
      601 aevttdptsg rvtvkgqter gaqveidfpd gskqtgtadg sgnfsvtsan dqpsgqitat
      661 asdkarnrsa patrqytdtv dkdapdmpti adavtdmttg qvtvtgkaea eatvtvsfpg
      721 ggsktvqagk dgrysvqsdd dvpagtitvt ardaagntsq ptkknytdsf aqthrisrld
      781 tnpqngivtv sgkaqpneal vlrlpngdev slsaqtdgsf tassttdvpa gevqllsran
      841 gqqtvlakra ytdtftkgrs dpslstaiqy rffgvrpqet satlmslyma tfrkgppvvq
      901 ildasqqdke lakraakaft lkivpdynqq kydvqvswpa gtftdadtgr ltnlkvkifd
      961 tgtgnylatr gqiyfepphn
//
LOCUS       WP_235201942             507 aa            linear   BCT 02-MAR-2025
DEFINITION  inverse autotransporter beta domain-containing protein [Bordetella
            holmesii].
ACCESSION   WP_235201942
VERSION     WP_235201942.1
KEYWORDS    RefSeq.
SOURCE      Bordetella holmesii
  ORGANISM  Bordetella holmesii
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
REFERENCE   1  (residues 1 to 507)
  AUTHORS   Leo,J.C., Oberhettinger,P., Schutz,M. and Linke,D.
  TITLE     The inverse autotransporter family: intimin, invasin and related
            proteins
  JOURNAL   Int J Med Microbiol 305 (2), 276-282 (2015)
   PUBMED   25596886
REFERENCE   2  (residues 1 to 507)
  AUTHORS   Fairman,J.W., Dautin,N., Wojtowicz,D., Liu,W., Noinaj,N.,
            Barnard,T.J., Udho,E., Przytycka,T.M., Cherezov,V. and
            Buchanan,S.K.
  TITLE     Crystal structures of the outer membrane domain of intimin and
            invasin from enterohemorrhagic E. coli and enteropathogenic Y.
            pseudotuberculosis
  JOURNAL   Structure 20 (7), 1233-1243 (2012)
   PUBMED   22658748
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023351.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11924.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Bordetella holmesii"
                     /db_xref="taxon:35814"
     Protein         1..507
                     /product="inverse autotransporter beta domain-containing
                     protein"
                     /calculated_mol_wt=54567
     Region          1..>33
                     /region_name="ESPR"
                     /note="Extended Signal Peptide of Type V secretion system;
                     pfam13018"
                     /db_xref="CDD:463773"
     Region          118..381
                     /region_name="IAT_beta"
                     /note="Inverse autotransporter, beta-domain; pfam11924"
                     /db_xref="CDD:432192"
     Region          411..476
                     /region_name="Big_6"
                     /note="Bacterial Ig domain; pfam17936"
                     /db_xref="CDD:465576"
ORIGIN      
        1 mnkniyrlvw srargawvva gewaramgka ggqrrrmrpr lrqttaamis gsllaqallp
       61 vsvaaqgipt lgptrpspqe asaaedrswe hrlaaqaqsl aqaqaerepg arldadylkr
      121 eaqaqandvl rggvslares glpflrnlqg avnvdfdsgr ssvqlntide vfragpatgl
      181 vqvgahnqns rptgnvgavy rhevhealmv gangfldyef gkqhlrgslg ieaiapefsl
      241 hgnvyvpisg wkgakrdnrr eekpasgmdv gvqyspafap glslktsyfr wngahvdyyd
      301 sgrsqagakg fkvgveyrpv pvlslgleqt qvmggggqtr lqlglsvnls eplskqlrrp
      361 dsdapvfsld grrhtlvere nrivlktrrk qivlpltvts vstrqadgri tisglthaga
      421 tvtvrlpdgs tgvagadaag rftylsaedq psglivlrar naegdssrev syqyvdevrp
      481 gslrvavtsl vtqpvvrsle vsgrtep
//
LOCUS       WP_235201959             107 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Bordetella holmesii].
ACCESSION   WP_235201959
VERSION     WP_235201959.1
KEYWORDS    RefSeq.
SOURCE      Bordetella holmesii
  ORGANISM  Bordetella holmesii
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
REFERENCE   1  (residues 1 to 107)
  AUTHORS   Vertes,A.A., Inui,M., Kobayashi,M., Kurusu,Y. and Yukawa,H.
  TITLE     Isolation and characterization of IS31831, a transposable element
            from Corynebacterium glutamicum
  JOURNAL   Mol Microbiol 11 (4), 739-746 (1994)
   PUBMED   8196545
REFERENCE   2  (residues 1 to 107)
  AUTHORS   van der Zee,A., Agterberg,C., van Agterveld,M., Peeters,M. and
            Mooi,F.R.
  TITLE     Characterization of IS1001, an insertion sequence element of
            Bordetella parapertussis
  JOURNAL   J Bacteriol 175 (1), 141-147 (1993)
   PUBMED   8093238
REFERENCE   3  (residues 1 to 107)
  AUTHORS   Johansen,E. and Kibenich,A.
  TITLE     Isolation and characterization of IS1165, an insertion sequence of
            Leuconostoc mesenteroides subsp. cremoris and other lactic acid
            bacteria
  JOURNAL   Plasmid 27 (3), 200-206 (1992)
   PUBMED   1325060
REFERENCE   4  (residues 1 to 107)
  AUTHORS   Cirillo,J.D., Barletta,R.G., Bloom,B.R. and Jacobs,W.R. Jr.
  TITLE     A novel transposon trap for mycobacteria: isolation and
            characterization of IS1096
  JOURNAL   J Bacteriol 173 (24), 7772-7780 (1991)
   PUBMED   1660454
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013753.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01610.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Bordetella holmesii"
                     /db_xref="taxon:35814"
     Protein         <1..107
                     /product="transposase"
     Region          <16..99
                     /region_name="COG3464"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442687"
ORIGIN      
        1 rnscrlirkk vfypwalcrc rtksggqawd hwlqqaqgsg iaalahfalk lkaylhgils
       61 rcrhrlntsi veginntikv ikrraygyrd qeyfflkirs afpgipr
//
LOCUS       WP_235201965             193 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Bordetella holmesii].
ACCESSION   WP_235201965
VERSION     WP_235201965.1
KEYWORDS    RefSeq.
SOURCE      Bordetella holmesii
  ORGANISM  Bordetella holmesii
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13458.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Bordetella holmesii"
                     /db_xref="taxon:35814"
     Protein         1..193
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=20212
     Region          17..>142
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 maasaivact ahaenikiay ngdisgspsa esgqigvmgi aaavedinkr ggvlgrklef
       61 lvrddlgqpp ksiqnmtdli drekvavvfg ptnsgnalaw khianqkkmp vlvssassta
      121 itepagnnpn ylfrismvdr dqaaaliaya akspqakknr vfcrdyglra sgsegygadr
      181 gtarhqaggd rkv
//
LOCUS       WP_235202001             438 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Ralstonia pickettii].
ACCESSION   WP_235202001
VERSION     WP_235202001.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia pickettii
  ORGANISM  Ralstonia pickettii
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Ralstonia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Ralstonia pickettii"
                     /db_xref="taxon:329"
     Protein         1..438
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47104
     Region          1..398
                     /region_name="2A0115"
                     /note="benzoate transport; TIGR00895"
                     /db_xref="CDD:273327"
ORIGIN      
        1 mtsyqrrlfa iiatawffds mdlgimtfvl gsiktefgls tmqtgllass sflgmflgaa
       61 tagmladkfg rkpvfqlsmi fwgvgslmcg lshsanelma yrvllgfgmg meppiglamv
      121 seivparsrg ryiailegfw pigfiaagvt ayfllsiigw rgifialavp avfvfvvrrs
      181 ipesprwled agrhdeadnv msgfeqkvlr asgmkslpav eagvaperai grgaafaelw
      241 kgvygkrtam lwalwlfall gyyglttwlg allqqagyev tksilytvyi slagipgfif
      301 sawllekwgr kptcmlmlvg saasaymygq aaashapiaq lisaglcmqf fmfgmwsvly
      361 aytpelyptr sratgagfas sigrigslmg pyivglvlpv agqsgvfslg aacfvaaalv
      421 vmlfgietkg qsleqlsh
//
LOCUS       WP_235202013             111 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail assembly chaperone [Ralstonia pickettii].
ACCESSION   WP_235202013
VERSION     WP_235202013.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia pickettii
  ORGANISM  Ralstonia pickettii
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Ralstonia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028088.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16778.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Ralstonia pickettii"
                     /db_xref="taxon:329"
     Protein         1..111
                     /product="phage tail assembly chaperone"
                     /calculated_mol_wt=12447
     Region          48..107
                     /region_name="Caudo_TAP"
                     /note="Caudovirales tail fibre assembly protein, lambda
                     gpK; cl17077"
                     /db_xref="CDD:450149"
ORIGIN      
        1 mithdelifc vrqkypnlvh gvdfwvgqnm crdtgkqlea arlhvlgqra reerdrrlma
       61 adamfykamd sgdvskaqqv gqyrqalrev peqpgfpanf tgpdtpgall d
//
LOCUS       WP_235202039             140 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: tripartite tricarboxylate transporter TctB family
            protein [Ralstonia].
ACCESSION   WP_235202039
VERSION     WP_235202039.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia
  ORGANISM  Ralstonia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018979.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07331.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Ralstonia"
                     /db_xref="taxon:48736"
     Protein         1..140
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /calculated_mol_wt=14836
ORIGIN      
        1 mfivagaafa ilarsyrmgt assmgpgyfp fwlgvvlvll gvvvvvqsls rkgvvdripr
       61 wdvktllwvl gsvvlfglll qplglvlslv vlvlvssmas heftlkgaag taivmvvmsl
      121 aafvyglklq fpvwpafign
//
LOCUS       WP_235202051             356 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: replication-relaxation family protein [Ralstonia].
ACCESSION   WP_235202051
VERSION     WP_235202051.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia
  ORGANISM  Ralstonia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
REFERENCE   1  (residues 1 to 356)
  AUTHORS   Zou,X., Caufield,P.W., Li,Y. and Qi,F.
  TITLE     Complete nucleotide sequence and characterization of pUA140, a
            cryptic plasmid from Streptococcus mutans
  JOURNAL   Plasmid 46 (2), 77-85 (2001)
   PUBMED   11591133
  REMARK    Erratum:[Plasmid 2002 May;47(3):251. Zhou X [corrected to Zou X]]
REFERENCE   2  (residues 1 to 356)
  AUTHORS   Nunez,B. and De La Cruz,F.
  TITLE     Two atypical mobilization proteins are involved in plasmid CloDF13
            relaxation
  JOURNAL   Mol Microbiol 39 (4), 1088-1099 (2001)
   PUBMED   11251827
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025186.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13814.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Ralstonia"
                     /db_xref="taxon:48736"
     Protein         1..356
                     /product="replication-relaxation family protein"
                     /calculated_mol_wt=39850
ORIGIN      
        1 mntaaqtdap tptnvrqras qiksrgltse ihptvlqeam wlralstlnr frviravdia
       61 laccperpfk aaltaaqram rgmakaglvr ryrtdrfqhv yglttagarw lddhgiaacp
      121 svrrvadmsn pehrlwmnfi vlacearglr altesealre lnkgtgntgk vkqgfmsvev
      181 wpdtprtlrp dalayepdgv twfeidrskr gndretalsk lvrrigsale ddttlrrvvv
      241 fartdrilqd alavirktak vsnaevinpd ygrhfkevep gvfevwaavw psggggaidv
      301 rvghaivqll ptwlpkvrld stnehslsgw fnenylpyrr pntakpwrqp vsplrl
//
LOCUS       WP_235202060             119 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: TetR family transcriptional regulator C-terminal
            domain-containing protein [Ralstonia].
ACCESSION   WP_235202060
VERSION     WP_235202060.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia
  ORGANISM  Ralstonia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
REFERENCE   1  (residues 1 to 119)
  AUTHORS   Sullivan,M.J., Curson,A.R., Shearer,N., Todd,J.D., Green,R.T. and
            Johnston,A.W.
  TITLE     Unusual regulation of a leaderless operon involved in the
            catabolism of dimethylsulfoniopropionate in Rhodobacter sphaeroides
  JOURNAL   PLoS One 6 (1), e15972 (2011)
   PUBMED   21249136
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16925.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Ralstonia"
                     /db_xref="taxon:48736"
     Protein         1..119
                     /product="TetR family transcriptional regulator C-terminal
                     domain-containing protein"
                     /calculated_mol_wt=12853
ORIGIN      
        1 mpdattrlkg ifdrygtwfr tpefagclfe halaefgntc pevtdvavry rddllammet
       61 llkdvvpant arrlagvyvm rlagvtadar aigdpsaasq awhaaetllh qaraateav
//
LOCUS       WP_235202120              77 aa            linear   BCT 02-MAR-2025
DEFINITION  glutamate cyclase domain-containing protein, partial [Bordetella
            holmesii].
ACCESSION   WP_235202120
VERSION     WP_235202120.1
KEYWORDS    RefSeq.
SOURCE      Bordetella holmesii
  ORGANISM  Bordetella holmesii
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
REFERENCE   1  (residues 1 to 77)
  AUTHORS   Ariyoshi,M., Katane,M., Hamase,K., Miyoshi,Y., Nakane,M.,
            Hoshino,A., Okawa,Y., Mita,Y., Kaimoto,S., Uchihashi,M., Fukai,K.,
            Ono,K., Tateishi,S., Hato,D., Yamanaka,R., Honda,S., Fushimura,Y.,
            Iwai-Kanai,E., Ishihara,N., Mita,M., Homma,H. and Matoba,S.
  TITLE     D-Glutamate is metabolized in the heart mitochondria
  JOURNAL   Sci Rep 7, 43911 (2017)
   PUBMED   28266638
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 77)
  AUTHORS   Sohn,Y.S., Lee,S.G., Lee,K.H., Ku,B., Shin,H.C., Cha,S.S.,
            Kim,Y.G., Lee,H.S., Kang,S.G. and Oh,B.H.
  TITLE     Identification of a Highly Conserved Hypothetical Protein TON_0340
            as a Probable Manganese-Dependent Phosphatase
  JOURNAL   PLoS One 11 (12), e0167549 (2016)
   PUBMED   27907125
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025694.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14336.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Bordetella holmesii"
                     /db_xref="taxon:35814"
     Protein         <1..77
                     /product="glutamate cyclase domain-containing protein"
     Region          <1..>54
                     /region_name="DUF4392"
                     /note="Domain of unknown function (DUF4392); pfam14336"
                     /db_xref="CDD:464140"
ORIGIN      
        1 aicddliavt rpcaaiaier pgrnakglyh glggrpldgl vanldylfdk vkgarsgaar
       61 avqahrhgrv hdaqtrr
//
LOCUS       WP_235202125             600 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial [Bordetella
            holmesii].
ACCESSION   WP_235202125
VERSION     WP_235202125.1
KEYWORDS    RefSeq.
SOURCE      Bordetella holmesii
  ORGANISM  Bordetella holmesii
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
REFERENCE   1  (residues 1 to 600)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 600)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 600)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 600)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Bordetella holmesii"
                     /db_xref="taxon:35814"
     Protein         1..>600
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          6..549
                     /region_name="PRK11147"
                     /note="ABC transporter ATPase component; Reviewed"
                     /db_xref="CDD:236861"
ORIGIN      
        1 maqntlislt nvqlayghhp lldhadfaiq egerigligr ngagkssllr lldgrnqpdd
       61 gdisrssglr vvtveqepil detrsvydvv cdeeanpedw qrparvratl eklglptdal
      121 iaglsggtrk rvalaralvd qpdlllldep tnhldfegia wleellrtwk gaaviithdr
      181 rfldaiatri veldrgrlls fpgnfsqwqe rkaqwleaer leqarfdkll aqeevwirkg
      241 vearrtrneg rvrrlerlrv eradrrermg nvnlavaqgq rsgkivselr dvsktfgdka
      301 vvrdysttil rgdrigiigp ngagkttllk lilgqlapds gtvrtgtnve vayfdqmraq
      361 ldenaaladi inpgsewvei ggtrkhvmsy lgdflfspar agspvrslsg gerarlllar
      421 lfarpanilv ldeptndldi etlelleell qdyagtvllv shdraflnnv vtqtiayegd
      481 ghwrdyvggy dewmlqrpap vasqidsapa tapaapapra kparsakiss welreleelp
      541 dviaaleaeq lrllrrtgqr ggrgtaafdg lrhgvevprt hfalmlyrsk aqfcggklll
//
LOCUS       WP_235202073              48 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MipA/OmpV family protein [Ralstonia].
ACCESSION   WP_235202073
VERSION     WP_235202073.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia
  ORGANISM  Ralstonia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
REFERENCE   1  (residues 1 to 48)
  AUTHORS   Vollmer,W., von Rechenberg,M. and Holtje,J.V.
  TITLE     Demonstration of molecular interactions between the murein
            polymerase PBP1B, the lytic transglycosylase MltA, and the
            scaffolding protein MipA of Escherichia coli
  JOURNAL   J Biol Chem 274 (10), 6726-6734 (1999)
   PUBMED   10037771
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018352.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06629.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..48
                     /organism="Ralstonia"
                     /db_xref="taxon:48736"
     Protein         1..48
                     /product="MipA/OmpV family protein"
                     /calculated_mol_wt=5126
     Region          <1..48
                     /region_name="MipA"
                     /note="MltA-interacting protein MipA; cl46400"
                     /db_xref="CDD:480740"
ORIGIN      
        1 mawthtfsrh ravqtavgts rllgnaaksp ivqnkqsyfg gtglvytf
//
LOCUS       WP_235202138             310 aa            linear   BCT 02-MAR-2025
DEFINITION  GHKL domain-containing protein [Streptococcus mitis].
ACCESSION   WP_235202138
VERSION     WP_235202138.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus mitis
  ORGANISM  Streptococcus mitis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus; Streptococcus mitis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025854.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14501.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Streptococcus mitis"
                     /db_xref="taxon:28037"
     Protein         1..310
                     /product="GHKL domain-containing protein"
                     /calculated_mol_wt=35667
     Region          <78..304
                     /region_name="CitA"
                     /note="Sensor histidine kinase DipB regulating
                     citrate/malate metabolism [Signal transduction
                     mechanisms]; COG3290"
                     /db_xref="CDD:442519"
ORIGIN      
        1 mkrwsldldl ffsdtfkthy rksffiilpl tgfrifssfm tnrnssfyvr fdttisllif
       61 ilffswlfyi rhleqvyrde qtiqrqeeen rslqgmvdkl ghlydevrgf rhdfagivas
      121 mepaianqdm aevstiyqdv flktneklrk adytafnlhn ihdiairntl akamivadnq
      181 gihfsletvg vveelalpml eairilsilt tnaleaasea enpqirvall agdrsvrfii
      241 entrkkeeln psilsqkgys tkgnhsglgl atledmvfhy dlnldtqlge ttfrqdlelp
      301 fkdekrggee
//
LOCUS       WP_235202156             126 aa            linear   BCT 02-MAR-2025
DEFINITION  3'-5' exonuclease [Streptococcus mitis].
ACCESSION   WP_235202156
VERSION     WP_235202156.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus mitis
  ORGANISM  Streptococcus mitis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus; Streptococcus mitis group.
REFERENCE   1  (residues 1 to 126)
  AUTHORS   Ozawa,K., Horan,N.P., Robinson,A., Yagi,H., Hill,F.R., Jergic,S.,
            Xu,Z.Q., Loscha,K.V., Li,N., Tehei,M., Oakley,A.J., Otting,G.,
            Huber,T. and Dixon,N.E.
  TITLE     Proofreading exonuclease on a tether: the complex between the E.
            coli DNA polymerase III subunits alpha, epsilon, theta; and beta
            reveals a highly flexible arrangement of the proofreading domain
  JOURNAL   Nucleic Acids Res 41 (10), 5354-5367 (2013)
   PUBMED   23580545
REFERENCE   2  (residues 1 to 126)
  AUTHORS   Viswanathan,M. and Lovett,S.T.
  TITLE     Exonuclease X of Escherichia coli. A novel 3'-5' DNase and Dnaq
            superfamily member involved in DNA repair
  JOURNAL   J Biol Chem 274 (42), 30094-30100 (1999)
   PUBMED   10514496
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024754.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13361.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Streptococcus mitis"
                     /db_xref="taxon:28037"
     Protein         1..126
                     /product="3'-5' exonuclease"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=14907
     Region          <35..101
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            92
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350194"
ORIGIN      
        1 mtvideffnl disqfikwyn yifddtkqes isyytlhgsk glefdnvvvv lqdnfarknd
       61 yckyyfenyg npdcldkrfs evrnllyvac sraklnlhvi yicslqesil eniesifddi
      121 kyintn
//
LOCUS       WP_235202181             541 aa            linear   BCT 02-MAR-2025
DEFINITION  alginate export family protein [Methylobacter tundripaludum].
ACCESSION   WP_235202181
VERSION     WP_235202181.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter tundripaludum
  ORGANISM  Methylobacter tundripaludum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
REFERENCE   1  (residues 1 to 541)
  AUTHORS   Whitney,J.C., Hay,I.D., Li,C., Eckford,P.D., Robinson,H.,
            Amaya,M.F., Wood,L.F., Ohman,D.E., Bear,C.E., Rehm,B.H. and
            Howell,P.L.
  TITLE     Structural basis for alginate secretion across the bacterial outer
            membrane
  JOURNAL   Proc Natl Acad Sci U S A 108 (32), 13083-13088 (2011)
   PUBMED   21778407
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024765.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13372.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Methylobacter tundripaludum"
                     /db_xref="taxon:173365"
     Protein         1..541
                     /product="alginate export family protein"
                     /calculated_mol_wt=60149
     Region          79..507
                     /region_name="Alginate_exp"
                     /note="Alginate export; cl16257"
                     /db_xref="CDD:472886"
ORIGIN      
        1 mmrrksftgv tvnhtlsliv tgglclgysl ddvhaaeppq sysrapmaay nfmmqdpllg
       61 nsyekpvwnl hdtlslpewl svgveqrtry esvsdtfkas qpapapkvgg gdqqialqsd
      121 lwiqaklgkf rfaaefmdar ttlsddgtnn tpnppnnssv dtldfaqgyv swtdqnlffs
      181 gkgvevkagr qtmdlgsrrl iarpifrntv nnftgvrvrv idydhwqfna fatmpvlrfp
      241 nynsvtpnad llnhhqwdee dtrtwfsggi legsrlykei naevylyhld egdsrlnptr
      301 nrryftpgir iyqkpskgty dftaegmgqf gtvkyaatga fantekqhea wsshieagys
      361 fdlpwsprfy lehdyasgnk nwkdssagae dsrfdplyga sdfdfgpagi ygafqrtnin
      421 spgykldfap rndmsfrlqq rliwlaegqd cwgaaactag ttpglaggng syvgdqigft
      481 grynfnssln fdagwyhlfk gdfaksakqt natgaaqtga afattpgadt dyffvtsqlr
      541 f
//
LOCUS       WP_235202192             469 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma 54-interacting transcriptional regulator [Methylobacter
            tundripaludum].
ACCESSION   WP_235202192
VERSION     WP_235202192.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter tundripaludum
  ORGANISM  Methylobacter tundripaludum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
REFERENCE   1  (residues 1 to 469)
  AUTHORS   Studholme,D.J. and Dixon,R.
  TITLE     Domain architectures of sigma54-dependent transcriptional
            activators
  JOURNAL   J Bacteriol 185 (6), 1757-1767 (2003)
   PUBMED   12618438
REFERENCE   2  (residues 1 to 469)
  AUTHORS   Chaney,M., Grande,R., Wigneshweraraj,S.R., Cannon,W., Casaz,P.,
            Gallegos,M.T., Schumacher,J., Jones,S., Elderkin,S., Dago,A.E.,
            Morett,E. and Buck,M.
  TITLE     Binding of transcriptional activators to sigma 54 in the presence
            of the transition state analog ADP-aluminum fluoride: insights into
            activator mechanochemical action
  JOURNAL   Genes Dev 15 (17), 2282-2294 (2001)
   PUBMED   11544185
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00158.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Methylobacter tundripaludum"
                     /db_xref="taxon:173365"
     Protein         1..469
                     /product="sigma 54-interacting transcriptional regulator"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008134 - transcription factor binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=53517
     Region          <142..462
                     /region_name="RocR"
                     /note="RocR-type transcriptional regulator, contains PAS,
                     AAA-type ATPase, and DNA-binding Fis domains
                     [Transcription, Signal transduction mechanisms]; COG3829"
                     /db_xref="CDD:443041"
ORIGIN      
        1 mqrtvsniql vclrskdyle svvcvfqelg dtlsiidskc wlegqikesn slvililpek
       61 nlmvdrivka ilatpnshyl aifflplndk vspilnacsd cccwpcdpfe lafrldrlss
      121 khsnsfdlsk fdmetvawkn lnligqssif ldtlsfikka secnapvlie getgcgkeva
      181 araihylgcr kdfpfipmnc gaipdqlien elfghergay tdakqsqagl teqadggtlf
      241 ldeiealsak gqvtllrfie dnvikplgai ksrkvnvrii aasnvclsel vaqglfrqdl
      301 ffrlnllhln lpslrnrkad iqplaehfmq kyrckyqqpd krfhpdavtw mndyhwpgnv
      361 relenfvhrs flmsqdveii ptdihhydda qlrsrrklfe rrqnfkfdav fneaknhvin
      421 qfeqhyltwl issskgnvtq aaeiaqkerr algkllkkhd inpiqyrgn
//
LOCUS       WP_235202240             120 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4113 domain-containing protein [Methylobacter tundripaludum].
ACCESSION   WP_235202240
VERSION     WP_235202240.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter tundripaludum
  ORGANISM  Methylobacter tundripaludum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024830.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13438.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Methylobacter tundripaludum"
                     /db_xref="taxon:173365"
     Protein         1..120
                     /product="DUF4113 domain-containing protein"
                     /calculated_mol_wt=13642
     Region          <4..119
                     /region_name="PolY"
                     /note="Y-family of DNA polymerases; cl28996"
                     /db_xref="CDD:452909"
     Region          71..118
                     /region_name="DUF4113"
                     /note="Domain of unknown function (DUF4113); pfam13438"
                     /db_xref="CDD:463876"
ORIGIN      
        1 mrlassstpl prdtraiiat anrrlkeifk sgygyqkcgm qlshiqpess psqnelfdfa
       61 dnnlptenrq lmkavdqinr rfpraisvaa tgfdktwksk sdrvsqrytt dwrelvcvkc
//
LOCUS       WP_235202265             728 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 N-terminal domain-containing protein
            [Methylobacter tundripaludum].
ACCESSION   WP_235202265
VERSION     WP_235202265.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter tundripaludum
  ORGANISM  Methylobacter tundripaludum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
REFERENCE   1  (residues 1 to 728)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00933.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Methylobacter tundripaludum"
                     /db_xref="taxon:173365"
     Protein         1..728
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=79849
     Region          14..718
                     /region_name="PRK15098"
                     /note="beta-glucosidase BglX"
                     /db_xref="CDD:185053"
ORIGIN      
        1 mnaqetnrai eskvknllsq mtleekvgqm tqvdftviga pkeqnaedqi dpakledavl
       61 nhhvgsilnt pftpdnkaqs idiwrkmtrn vqdaaartrl kipviygida ihgatytqns
      121 vlfpqainma atfnselafk egeitarevr asgqqwnfst vmdigrqplw prlwetfged
      181 vhlatvmgta yikghqgddf saadklptcl khyvgysypl ngkdrtpawi germlreyfl
      241 ptfeagvkag aptvmvnsae vdgipghanh yylttilrge lgfkgftvsd wadierlytr
      301 dkmaaspkea vkiavmagid msmvpfdfsf ydllvdlvks gevpmsride avsriltvky
      361 qaglfepkpl lpiegnfata eaieinrqaa resivlaknd hnilplkkda nilvtgptan
      421 llsvmnggwt vtwqgateel ypqekltvle aiqekatgkv tyvggdafda pidvqklvde
      481 akdhdvills lgehpytetp gnietlnldq aqidlanaai atgkpvillt lggrpriits
      541 iaerasgvil gflpgmegge aiadilygdy npngklpisy prntngitpy dykpiesfes
      601 niynplypfg hglsyttfet sglkvekeki nigenihvtv nvkntgaltg kegvlvyind
      661 vaasvtrpnk qlkafkkvel nsgqserlsf iltphdlsfi gvdlkrivep gdfkvmvgne
      721 iagftvtk
//
LOCUS       WP_235202273             166 aa            linear   BCT 02-MAR-2025
DEFINITION  SIMPL domain-containing protein [Methylobacter tundripaludum].
ACCESSION   WP_235202273
VERSION     WP_235202273.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter tundripaludum
  ORGANISM  Methylobacter tundripaludum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
REFERENCE   1  (residues 1 to 166)
  AUTHORS   Vig,E., Green,M., Liu,Y., Yu,K.Y., Kwon,H.J., Tian,J., Goebl,M.G.
            and Harrington,M.A.
  TITLE     SIMPL is a tumor necrosis factor-specific regulator of nuclear
            factor-kappaB activity
  JOURNAL   J Biol Chem 276 (11), 7859-7866 (2001)
   PUBMED   11096118
REFERENCE   2  (residues 1 to 166)
  AUTHORS   Pfeuffer,T., Goebel,W., Laubinger,J., Bachmann,M. and Kuhn,M.
  TITLE     LaXp180, a mammalian ActA-binding protein, identified with the
            yeast two-hybrid system, co-localizes with intracellular Listeria
            monocytogenes
  JOURNAL   Cell Microbiol 2 (2), 101-114 (2000)
   PUBMED   11207567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016300.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04402.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Methylobacter tundripaludum"
                     /db_xref="taxon:173365"
     Protein         1..166
                     /product="SIMPL domain-containing protein"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress.; The SIMPL domain is
                     named for its presence in mouse protein SIMPL (signalling
                     molecule that associates with mouse pelle-like kinase).
                     Bacterial member BP26, from Brucella, was shown to
                     assemble into a channel-like structure, while YggE from E.
                     coli has been associated with resistance to oxidative
                     stress.; The SIMPL domain is named for its presence in
                     mouse protein SIMPL (signalling molecule that associates
                     with mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress.; The SIMPL domain is
                     named for its presence in mouse protein SIMPL (signalling
                     molecule that associates with mouse pelle-like kinase).
                     Bacterial member BP26, from Brucella, was shown to
                     assemble into a channel-like structure, while YggE from E.
                     coli has been associated with resistance to oxidative
                     stress."
                     /calculated_mol_wt=17821
     Region          1..>158
                     /region_name="SIMPL"
                     /note="Outer membrane channel-forming protein BP26/OMP28,
                     SIMPL family [Cell wall/membrane/envelope biogenesis];
                     COG2859"
                     /db_xref="CDD:442106"
ORIGIN      
        1 mnptnranal ilgisiflgl talgyllgra aidvkeyers vsvkglsere lpadvviwpi
       61 aftesgndlg tlynsievsk ksieaflvsk giaapeisys lpsvtdkaaq efnngqkaef
      121 ryvaiqtvtv yssnvsivrk amnelselgk tgiafkgedf qnqvvg
//
LOCUS       WP_235202109             663 aa            linear   BCT 02-MAR-2025
DEFINITION  phage distal tail protein domain-containing protein [Oenococcus
            oeni].
ACCESSION   WP_235202109
VERSION     WP_235202109.1
KEYWORDS    RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
REFERENCE   1  (residues 1 to 663)
  AUTHORS   Spinelli,S., Tremblay,D., Moineau,S., Cambillau,C. and Goulet,A.
  TITLE     Structural Insights into Lactococcal Siphophage p2 Baseplate
            Activation Mechanism
  JOURNAL   Viruses 12 (8), 878 (2020)
   PUBMED   32796652
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 663)
  AUTHORS   Sciara,G., Bebeacua,C., Bron,P., Tremblay,D., Ortiz-Lombardia,M.,
            Lichiere,J., van Heel,M., Campanacci,V., Moineau,S. and
            Cambillau,C.
  TITLE     Structure of lactococcal phage p2 baseplate and its mechanism of
            activation
  JOURNAL   Proc Natl Acad Sci U S A 107 (15), 6852-6857 (2010)
   PUBMED   20351260
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028084.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16774.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Oenococcus oeni"
                     /db_xref="taxon:1247"
     Protein         1..663
                     /product="phage distal tail protein domain-containing
                     protein"
                     /calculated_mol_wt=72069
     Region          1..171
                     /region_name="Baseplate"
                     /note="Baseplate protein; pfam16774"
                     /db_xref="CDD:465267"
ORIGIN      
        1 migsmfqltn aqgktvdiqs ntlraytpig lglymtntys vynssfirtn sqltdptsnp
       61 yevyiqfgdi ssqsyqtfad fasflayppy tlayttdagt wyrkanlqsi tktekggsti
      121 iaadrlneaf ilefytawyq lqseeyvsys ndpnlglygk iyntsikrna tddsvsfpdq
      181 tlinssgidl asihdngsat gtiqvsgsse iqnalvsvkd ndgnivgsqq lntspnpdqt
      241 vaapsdtiii hdnsdgsstl stkvtagqsi qltqntvgli ysqanlgynn ltadsemllg
      301 lqsastagwn santistils gvytdsvgkt hnaiqmasts asasnvvvsk nivptlnsty
      361 ywsvwykvtd tlstaasvhl egrgivsgsd agteaevlis tttavgnwiq ltgsftptss
      421 sttylrlrfq nlgtgtilfs epminsgsql nayisdtvda tqwslkvtdg ylylmeinah
      481 evdftvlpqn tgynfnftfp hasgnyifdn gsetfafilg snlnylfpyt yiesgrnlnq
      541 kaipvsnsse yfglqngspc lititgpttt nvswevlqng itiasdafdv tltdnqqlvv
      601 ssypedqyar iynpdgsyvn isqyqditkt nyilipegds tivfyidkta gvqltykeer
      661 llv
//
LOCUS       WP_235202329            1501 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Bordetella holmesii].
ACCESSION   WP_235202329
VERSION     WP_235202329.1
KEYWORDS    RefSeq.
SOURCE      Bordetella holmesii
  ORGANISM  Bordetella holmesii
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1501
                     /organism="Bordetella holmesii"
                     /db_xref="taxon:35814"
     Protein         1..1501
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=158521
     Region          114..376
                     /region_name="IAT_beta"
                     /note="Inverse autotransporter, beta-domain; pfam11924"
                     /db_xref="CDD:432192"
     Region          <650..1088
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          <1009..>1358
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 msksirhpvr slasgervsg ddagsrrrqt grsgrrgrhr arpsvaatvg tsllvqsllp
       61 gsvlartapa ltpgsdaiap tapptwihkl adelrglaar qregqvaqld grylrlqaqg
      121 elnqalqdsv traresglpf lrrleggvni dvesgrsale lnaieevhra gkrsvlaqvg
      181 ahnendrpta saglvyrhdt aagwllgtna fvdrefgkqh wrasvgmeai apeftllgnv
      241 ylplsgwrgs rheerlqerp asgfdlglsy rpeawrglsl tasyfrwnga qvdvfdsgrg
      301 ryrpagfkyg lqyrpvpmls vgleqtqvsg gqrqlrlqlg lsirlgqpwa kqwrpeaapp
      361 iepsldrqrs alvrretriv lktrrkeiml plsahpiitd avdgrltvag ltqafatvsl
      421 rmpdgsvgtt radaagrfry tsardqpsgn vllravniyg dtsvelnlvy vdevvlgkln
      481 vallalapqp adralalsgk tqpsmevvah fpnsesvsak sdgkglfrvr srravgqgqv
      541 vvraidpqtr qeartaahyq ppvavaptid tvdtdaatgq vtvqgqaepg sdvelifpdg
      601 srqrvrasae gryrltsaad vpsgqlralr vprsgeaeaa slytyvdvsd ktppgapefa
      661 svltaadtgr vsitgraepg sdvdvlftdg shqrvhagkd gafqavshqd ipagpivara
      721 tdaagnvgpq asydytdgvd ktaprtptid vmeaaqdsgr vtvkgaaepg awvqvtfpdg
      781 srqrvqadsq gayhttsdhd vesgtivava vdaagnssqq arqvyvdlvd rtapglpvid
      841 rvqarqdngv vtvegtsepg allsvsfpgg evkqvraqad gryrvtssdh ieagairvea
      901 edeagnrspa aihsyvdtvd rrapdapsil aaqadpatgr vtltgnaepg aavtvrwpdg
      961 tvskavagpd gsyavtsdrd qpageimvsv tdaagnqssa mhqayvdhvd atapaaptvs
     1021 satadahtgr vtvqglaeag stvtvrwpdg trttttagad grytamserd lasgdivlea
     1081 ndaagntsgs arhvytddvd atppaapsid saladsrtgr vtvsgaaesg asvtvhfpdg
     1141 ttvqakadan grytatsngd igsgqitaqa sddagnsssa tphtyrdmvd atppaapvis
     1201 alttdsqtgr vtvtgqaeaa amvtvvfsdg srqtvtagpd grfeaqsakd iptgaisvma
     1261 adaagnqgpq alrqymdead ktapalpsid gldtndsngh vtvrgkaepl awidvtfpgg
     1321 skktaqadgq gryrvtsdkd igtgevlvva rddagnmslp akqqyrdsws gklppsavlf
     1381 elssrqnlsi tksaisggrl wmlyldpkya gkvqvdvqpt nvtnghaavv aqyvkrniek
     1441 tlrydrikrr nvyaigfhdq tsgnksvnkv pagrypnlle lrvtvpgegv yrmtlnvqvh
     1501 d
//
LOCUS       WP_235202334             216 aa            linear   BCT 02-MAR-2025
DEFINITION  tripartite tricarboxylate transporter permease, partial [Bordetella
            holmesii].
ACCESSION   WP_235202334
VERSION     WP_235202334.1
KEYWORDS    RefSeq.
SOURCE      Bordetella holmesii
  ORGANISM  Bordetella holmesii
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
REFERENCE   1  (residues 1 to 216)
  AUTHORS   Winnen,B., Hvorup,R.N. and Saier,M.H. Jr.
  TITLE     The tripartite tricarboxylate transporter (TTT) family
  JOURNAL   Res Microbiol 154 (7), 457-465 (2003)
   PUBMED   14499931
REFERENCE   2  (residues 1 to 216)
  AUTHORS   Sweet,G.D., Kay,C.M. and Kay,W.W.
  TITLE     Tricarboxylate-binding proteins of Salmonella typhimurium.
            Purification, crystallization, and physical properties
  JOURNAL   J Biol Chem 259 (3), 1586-1592 (1984)
   PUBMED   6141166
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014073.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01970.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Bordetella holmesii"
                     /db_xref="taxon:35814"
     Protein         <1..216
                     /product="tripartite tricarboxylate transporter permease"
     Region          <24..204
                     /region_name="TctA"
                     /note="Tripartite tricarboxylate transporter TctA family;
                     cl00772"
                     /db_xref="CDD:469914"
ORIGIN      
        1 sserrsftpg lyvgavlnlg aghtsfiplm aigipenavm almlaafivk giqpgpnmia
       61 thpdlfwglv asmwvgncfl lllnvplvry wlsvfkipyt vlfpsilffc cigtysinns
      121 lddifitaff gaigyifmrl gmepaplmle filgpmleen frramllsrg dfgifvtrpi
      181 sgtllgvial iilfqfrgfl rkrkqteplp shadqa
//
LOCUS       WP_235202281             178 aa            linear   BCT 02-MAR-2025
DEFINITION  CsiV family protein [Methylobacter tundripaludum].
ACCESSION   WP_235202281
VERSION     WP_235202281.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter tundripaludum
  ORGANISM  Methylobacter tundripaludum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
REFERENCE   1  (residues 1 to 178)
  AUTHORS   Dorr,T., Lam,H., Alvarez,L., Cava,F., Davis,B.M. and Waldor,M.K.
  TITLE     A novel peptidoglycan binding protein crucial for PBP1A-mediated
            cell wall biogenesis in Vibrio cholerae
  JOURNAL   PLoS Genet 10 (6), e1004433 (2014)
   PUBMED   24945690
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022425.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10972.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Methylobacter tundripaludum"
                     /db_xref="taxon:173365"
     Protein         1..178
                     /product="CsiV family protein"
                     /calculated_mol_wt=19278
     Region          7..178
                     /region_name="CsiV"
                     /note="Peptidoglycan-binding protein, CsiV; pfam10972"
                     /db_xref="CDD:431567"
ORIGIN      
        1 mirvmaygla amlglfssql laeggayqie liifsqamst tevfeqtasq ikwpsaltel
       61 saykkpdatt lddsyaalak dsayrpilhv gwvqpieggg viapvhiqga ggkldgylql
      121 qhdqglqmtv dlelgsdfdg gsgkaviyrl nekrfiklne lyyldhpkfg vvvkispl
//
LOCUS       WP_235202546             182 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: chalcone isomerase family protein [Vibrio].
ACCESSION   WP_235202546
VERSION     WP_235202546.1
KEYWORDS    RefSeq.
SOURCE      Vibrio
  ORGANISM  Vibrio
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027363.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16036.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Vibrio"
                     /db_xref="taxon:662"
     Protein         1..182
                     /product="chalcone isomerase family protein"
                     /GO_function="GO:0016872 - intramolecular lyase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=20488
     Region          38..180
                     /region_name="Chalcone_3"
                     /note="Chalcone isomerase-like; cl03589"
                     /db_xref="CDD:446143"
ORIGIN      
        1 mhrirwgmla gliasslivs asvkantasd eqwqewrkvg saqltyfifd vyksqlltps
       61 gdyaqgkdvs phplalsiey qrdisqkqlv datieqwekl gysdtsswvt qledifpdik
      121 dgqqltyvsd gdigrfffss hseknqligs itdpqlndaf laiwlspqtq ypklrrelig
      181 ak
//
LOCUS       WP_235202551             304 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ROK family protein [Vibrio].
ACCESSION   WP_235202551
VERSION     WP_235202551.1
KEYWORDS    RefSeq.
SOURCE      Vibrio
  ORGANISM  Vibrio
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Vibrio"
                     /db_xref="taxon:662"
     Protein         1..304
                     /product="ROK family protein"
                     /calculated_mol_wt=31986
     Region          8..300
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mkrktmlvgl diggtkiegv gldkgtyatl vkhreptnte syqgflesvl avikevekhg
       61 eihsigigcc gsvgndglmq ganvtvlngq dfigdlnrsi dvpvalanda dclalsefkd
      121 gaakdaehsc vaiiigtgcg sgvvinnglv tglnklggel ghnplpgydk nkdgqpiecy
      181 cgslnctesf vsgtgfgrsf sekyysadsk qimalcaegd ldaqqhfdly cdqlarvcas
      241 ivnfvdpevi vlgggmsnve aiyplvnekl nlytfnksak trivknvhgd ssgvrgaafl
      301 hsls
//
LOCUS       WP_235202578             563 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: S8 family serine peptidase [Vibrio].
ACCESSION   WP_235202578
VERSION     WP_235202578.1
KEYWORDS    RefSeq.
SOURCE      Vibrio
  ORGANISM  Vibrio
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Vibrio"
                     /db_xref="taxon:662"
     Protein         1..563
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=61547
     Region          27..108
                     /region_name="Inhibitor_I9"
                     /note="Peptidase inhibitor I9; pfam05922"
                     /db_xref="CDD:428674"
     Region          125..378
                     /region_name="Peptidases_S8_PCSK9_ProteinaseK_like"
                     /note="Peptidase S8 family domain in ProteinaseK-like
                     proteins; cd04077"
                     /db_xref="CDD:173790"
     Site            order(128,131..132)
                     /site_type="other"
                     /note="calcium binding site 2 [ion binding]"
                     /db_xref="CDD:173790"
     Site            order(157,190,252..253,282,341,344)
                     /site_type="active"
                     /db_xref="CDD:173790"
     Site            order(157,190,344)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173790"
     Site            order(295,297,320)
                     /site_type="other"
                     /note="calcium binding site 1 [ion binding]"
                     /db_xref="CDD:173790"
     Region          <385..504
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
     Region          507..>538
                     /region_name="ChiC_BD"
                     /note="Chitin-binding domain of chitinase C; cd12215"
                     /db_xref="CDD:213178"
ORIGIN      
        1 mriksrials ilstalyfpa hadvndtyiv vlkdiaaqnn sphtkvkdia qqiidesptr
       61 earnsakskg qisrsfenlr sfsatlsekq aeqlkkhlkv kgvyknvtft sdnatqiqgs
      121 sapswgldrs dqrnlpldgt ydvgqytgkg vsiyivdsgi dlshsdfggr avsgwdfvdn
      181 dgdasdcrgh gthvagtaag nrfgiapead iysvrvlnce gkgngekiln afdwildhak
      241 qqgkpaviny sisrgsrwea mdtavdeivq vhnisfvdsa gnrdkdacnk sphsdysitv
      301 gsstnddyra hssnwgncvs lfapgdhits aadgggskim ngtsmaaphv tghiarllqm
      361 npqatteelk qtlinqtten alfdvgsgsp nrllhtqies nnintapiak atishtevnq
      421 sgyveldgvq sydpngdtls yrwkvispss hdvvitdqys vstrayipet aqdtrytfel
      481 tandsklidt aqvhvdyvaa nespcevwsa tktydlpgnf vswngkfwen hwwtkgdtag
      541 irgewayger ykpqhvtsir nke
//
LOCUS       WP_235202657            3224 aa            linear   BCT 02-MAR-2025
DEFINITION  Calx-beta domain-containing protein [Vibrio sp. B183].
ACCESSION   WP_235202657
VERSION     WP_235202657.1
KEYWORDS    RefSeq.
SOURCE      Vibrio sp. B183
  ORGANISM  Vibrio sp. B183
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 3224)
  AUTHORS   Schwarz,E. and Benzer,S.
  TITLE     The recently reported NIbeta domain is already known as the
            Calx-beta motif
  JOURNAL   Trends Biochem Sci 24 (7), 260 (1999)
   PUBMED   10390612
REFERENCE   2  (residues 1 to 3224)
  AUTHORS   Schwarz,E.M. and Benzer,S.
  TITLE     Calx, a Na-Ca exchanger gene of Drosophila melanogaster
  JOURNAL   Proc Natl Acad Sci U S A 94 (19), 10249-10254 (1997)
   PUBMED   9294196
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015140.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03160.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3224
                     /organism="Vibrio sp. B183"
                     /db_xref="taxon:1526762"
     Protein         1..3224
                     /product="Calx-beta domain-containing protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007154 - cell communication [Evidence
                     IEA]"
                     /calculated_mol_wt=340313
     Region          5..>386
                     /region_name="AidA"
                     /note="Autotransporter adhesin AidA [Cell
                     wall/membrane/envelope biogenesis, Intracellular
                     trafficking, secretion, and vesicular transport]; COG3468"
                     /db_xref="CDD:442691"
     Region          856..939
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          <1836..1898
                     /region_name="MAM"
                     /note="MAM domain, meprin/A5/mu; pfam00629"
                     /db_xref="CDD:459878"
     Region          <2237..3118
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          2477..2543
                     /region_name="Big_11"
                     /note="Bacterial Ig-like domain; pfam18200"
                     /db_xref="CDD:436343"
     Region          2726..>2857
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cd00198"
                     /db_xref="CDD:238119"
     Site            order(2733,2812,2842)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     Region          2948..3173
                     /region_name="COG2931"
                     /note="Ca2+-binding protein, RTX toxin-related [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:442175"
     Region          <3068..>3149
                     /region_name="Peptidase_M10_C"
                     /note="Peptidase M10 serralysin C terminal; cl23859"
                     /db_xref="CDD:451582"
ORIGIN      
        1 mtlsnssela tpvtmalang taesgdytsn qitvnfadgt stvvnavnge fsfnvpagns
       61 sytvsvettd dnnapvyegd etftlsgasg sqtgtvsgea tiqdggegnd ddrpeitsis
      121 sptvdeggtv vfdvtlsnps elgtpvtmtl angtaesddy tanqitvnfa dgtstvvnav
      181 ngefsfevpa gnssytvsve ttddnnapvy egdetftlsg asssqtgtvs gdatiqdggq
      241 ggdddrpqvs isgggdvneg naanftvhls ntatstvsfv ltlnagdtst edlasyqyqt
      301 angtwldvpt sgeisvppgs savnvkvitq qddtyegdes fslsvsagng tvsastdtta
      361 satildfedn ppeaenfdat ldangnasil fnsedaeqdh isdneddatn tpvgvvitel
      421 pesgqlyygd qlidaddlts fnsegevlqq gtifsdpnli ryendaestg fvlgvkeapd
      481 gmgggasqsn flnwgesvqg nagqrvltfd ngdsititss gqaltqyfgq pnaghigygl
      541 avgndgglqq getitidfth rpstsvevgl dglggwfedg hefettaivq aklddgsiie
      601 vpvsketsgn tdlfhvvtid apegrkieel ivttegpgnw elryletssn dtfdyravds
      661 dgnysdehtv tlvegnqapv atddpvafev algtfnsnsw thdgvsisgs yqgqdqsitq
      721 sgvkrgiagd enggpgaqiq ynredgeseq frvdldkpat efsfevsnlf kneggsgnhe
      781 qgkwvaylgd npvasgtfva ndgsnhgsyh fdeqdlggva fdsvvfeatd fsnipargsd
      841 ssdyfltgfk asgdgayaan qgevleiplt ellgndfdpn gdnirithvs evnnasarie
      901 ngvvyidldd afvgnttfdy vitddkggfa eatvsivvnp lpqevavesi smlensvdeg
      961 dslvykvtle egvlqetqys vtfgkldsds adnsdvdlsq viftngvtyd sttqqvvvpv
     1021 gvstfsvlip tvidgvyess edytlilgeq qatgtienvd iplvsvsenv svsegsaaef
     1081 tvslskntae avtinlalah letdasdiss mvveyhdgns wqtlaiapng dvilpagvtq
     1141 arvsvqtsdd dsqpvyegae rfelavsgva gaqgsdssva tivddgsvdp dgegpeiadd
     1201 drpvvtsvsd qnveeggvvs fdvalsakst sdtqvvleln einatspedf ngsvvtvkyg
     1261 dpeqseqvtl qngafefdlp agesdftvsv qtnddqvsdn netftlaakt eyqsnqvsgt
     1321 atiqdnekpt idldgseyqi efvsesagyh nvfgyyvyde ssdtqqlqil msdsydsrqn
     1381 gfdpvlanld smdnveyfli pnganaiena psgstfevds sgkllvngae qsninvflsh
     1441 denshlrise nsdgntvlsf ddqknhvndd ndyndlviki skqdtnvdsa tsftegddai
     1501 sianasidif ddkdaiqsmq vtltnkyagd qltwpstpgf tvsqtvtsns vtllitadtv
     1561 ggvsssefet flkgirfent senpdetgre idihvtdasg qqsetatttv svvevadltv
     1621 qqdasgdeds qialnisvpa nssvteivlt dlpdgsilks geniiaisng eatltpqqla
     1681 qltitppnns denftvnveg ytssnelieq hsidvqvdav tdvplitiae pevvsfhdfd
     1741 sidmgnrswr gnvsaseltq sdgaegiwgt dnrnsynevg ketvyrggvs grdnqiyele
     1801 grhgddqlft qfiaqadqfy tlsfdvvarr lndspltvfl edengdrkvl feyidqqsln
     1861 wqtesinfqa psdgeykvvf esetssnsyg alldditlek adnigyedsf iplsdivvgl
     1921 sdtdgsetls lvlnglpegs virdgnghsi tvvatpdgkn svdlsawsnd ltglevnvpe
     1981 egsyplefvv taqdnapata esvskvinlt vlpvldaesk evtldedeny ilgvsdfgit
     2041 dldaqisise lpssgvlevq tspgvwapvs egdlisvsnv sqgnlrftpe nnesgynqht
     2101 gagegnlnqd yahinfvvek gdaksdamtl tldvtpvadt pvlsittpdt vlpeqhfnva
     2161 twtgvivgnd ngqgvngstl isaidaldpq lassstttna qdtgrwataa dnavlvtglv
     2221 yleagtsydf vgrgddslai tiggvmsdqa ywgsssgqiq gsaftpqvsg yyplaiyhhn
     2281 qsgpgnfnvd vsingatavd ltssalsvvt detqldqsdv raselksvng vevyevygyn
     2341 eglqdteipl sqitsalndn dgsetlqvtl sglpqgatls dggshnvvvg asgevdvttw
     2401 dlsslsvlpp agshddftit vvatasevns tseadsqati dvvvhenkpt vtqsdanvvy
     2461 edhsaignvl tdidgrdsde dnilsvehfs innvsypagg svtlfegtfv mqangayeft
     2521 pnanwsgqlp vityttntga sdtlsiqvvp vadapqismt igemevvnva teqtddgrye
     2581 tsqdktipvs vsveltdids seslgsqivv tgipagvevy vndslivsqp ngsylitldg
     2641 dgdasfdikv phdysgslef piqvqgssve tvnqdtahst aeetlsfrsy vlesgshgdd
     2701 tivgngdhel ivgdvqgiqi iagqdyniaf vldtsgsmgg rvgtakteii evfdqllsta
     2761 nsgdnagtvn illtefatns gvtisvdlss ptaradfvsq lssiedngsg ltnyetsfda
     2821 avewfdsntn dqaenityfi tdgypnasnh lnvtsadfdq lvldydtstk dvvtledilp
     2881 dnysvgtavs ykgeeivsss gavkspltga tlgnlsysgg lrytdgsnas vqarhmyqvl
     2941 alisaveavg igngineatl sqydsdgvvv pninvdklae tilgqevtle qsednieggq
     3001 gndilfgdli dfdnidgqgi aalqkyvase tsspladvsa edvhsyvrqs hsdfdvsrdg
     3061 dqddtlsgga gddilfgqgg ddtldggagn dillggagdd tligglgsdi lsggdgedef
     3121 vwhygdldgg tdvitdfhvs edkidisdll gqdetmeell sdvsanvvds ngieltiqrd
     3181 ngqttqsikl dnvvdqlngi dtshgsitgn dltnllneii kshd
//
LOCUS       WP_235202933             164 aa            linear   BCT 02-MAR-2025
DEFINITION  CoA transferase, partial [Bordetella bronchiseptica].
ACCESSION   WP_235202933
VERSION     WP_235202933.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
REFERENCE   1  (residues 1 to 164)
  AUTHORS   Heider,J.
  TITLE     A new family of CoA-transferases
  JOURNAL   FEBS Lett 509 (3), 345-349 (2001)
   PUBMED   11749953
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014564.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02515.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..>164
                     /product="CoA transferase"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
     Region          <1..>164
                     /region_name="CaiB"
                     /note="Crotonobetainyl-CoA:carnitine CoA-transferase CaiB
                     and related acyl-CoA transferases [Lipid transport and
                     metabolism]; COG1804"
                     /db_xref="CDD:441409"
ORIGIN      
        1 msqaaghdin ylaltgaldm igpaggapvp plnlvgdyag galylalgvv sagleaarsg
       61 vgqvvdaami dgvsslltvf hgfrqagmln perganvldg gapyyttyat ldgrhmavga
      121 iepkffavll selgldqrel paqqdrarwp qlrqaiaarf aqrt
//
LOCUS       WP_235202955             456 aa            linear   BCT 02-MAR-2025
DEFINITION  3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal
            domain-containing protein [Bordetella bronchiseptica].
ACCESSION   WP_235202955
VERSION     WP_235202955.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
REFERENCE   1  (residues 1 to 456)
  AUTHORS   Abbadi,A., Brummel,M., Schutt,B.S., Slabaugh,M.B., Schuch,R. and
            Spener,F.
  TITLE     Reaction mechanism of recombinant 3-oxoacyl-(acyl-carrier-protein)
            synthase III from Cuphea wrightii embryo, a fatty acid synthase
            type II condensing enzyme
  JOURNAL   Biochem J 345 Pt 1 (Pt 1), 153-160 (2000)
   PUBMED   10600651
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020130.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08541.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..456
                     /product="3-oxoacyl-[acyl-carrier-protein] synthase III
                     C-terminal domain-containing protein"
                     /calculated_mol_wt=47556
     Region          19..320
                     /region_name="PksG"
                     /note="3-hydroxy-3-methylglutaryl CoA synthase [Lipid
                     transport and metabolism]; COG3425"
                     /db_xref="CDD:442651"
     Region          339..448
                     /region_name="COG1545"
                     /note="Uncharacterized OB-fold protein, contains Zn-ribbon
                     domain [General function prediction only]"
                     /db_xref="CDD:441154"
ORIGIN      
        1 manalgwlsg gagagkgsrt laywdedsvt mavaaarhal arqaapaida lqfasttppf
       61 aepqnaafvr aalrlpattl tqdvhgtpra gllalhmale sgtrtlvaaa dlptalpgst
      121 aearagdgga avltgdepgl lryldgasls apftdryraa ghdypqewee rwlreagyle
      181 lvhdaigral qaaslrpeqv dhfvlpcpvp gvaaavaaka glgqarlasa laencgdtga
      241 ahafvmlgra ledaapgqkv lvaqfgqgat allfeadeav aglaapvspa lqgglaedny
      301 mkllafrgri awdrglrgrf lvnealstaw rnadallgfv agrcretgqv qfpptrlaat
      361 ggfhldtqep wpladrggri atftadllaf spcppncygl vdidgggrvl meftdpqasq
      421 leagaavafa lrikdldpqt gyrryfwkal aaptad
//
LOCUS       WP_235202960             273 aa            linear   BCT 02-MAR-2025
DEFINITION  PD-(D/E)XK nuclease-like domain-containing protein [Yersinia
            rochesterensis].
ACCESSION   WP_235202960
VERSION     WP_235202960.1
KEYWORDS    RefSeq.
SOURCE      Yersinia rochesterensis
  ORGANISM  Yersinia rochesterensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024096.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12684.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Yersinia rochesterensis"
                     /db_xref="taxon:1604335"
     Protein         1..273
                     /product="PD-(D/E)XK nuclease-like domain-containing
                     protein"
                     /calculated_mol_wt=30930
     Region          <2..242
                     /region_name="PRK09709"
                     /note="exodeoxyribonuclease VIII"
                     /db_xref="CDD:236615"
ORIGIN      
        1 mmepghyqdi sneeyhkdea igsttikais vspanlyfnp fkgsksaqig taihaallep
       61 evferdfilk pdistraske ykallpadae kiligsevgt lekmiesaql nedfmdymtt
      121 sgrsevsmfa tcpitglklk crfdrisdyh sypldvkscr dasqrgfsqa fgqyhyhvqa
      181 afylyvlklv tgrelnqfcf falentppyk ncmyyigeds lelgrkimfe amnklvecld
      241 ddslrtegmv lpsseinvps ylfdeefdde vyi
//
LOCUS       WP_235202977             189 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: LysR substrate-binding domain-containing protein
            [Pseudomonas syringae group].
ACCESSION   WP_235202977
VERSION     WP_235202977.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae group
  ORGANISM  Pseudomonas syringae group
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 189)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Pseudomonas syringae group"
                     /db_xref="taxon:136849"
     Protein         1..189
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=20495
     Region          8..180
                     /region_name="LysR_substrate"
                     /note="LysR substrate binding domain; pfam03466"
                     /db_xref="CDD:460931"
ORIGIN      
        1 msasldflah hypdihlnvl hrgeqspsld slireaadil ivpgtvlneh ylehhhwsdh
       61 yvlavargkp sapqsfadfs qvsryvawrh pgverlhqql aaaqvrlsqr geltcldtll
      121 dlvakrhcit ivpsvllggr lgelepialp lavtrqisvv arpasllssa anaviqalkk
      181 psaaaapny
//
LOCUS       WP_235203004             323 aa            linear   BCT 02-MAR-2025
DEFINITION  multiubiquitin domain-containing protein [Pseudomonas syringae].
ACCESSION   WP_235203004
VERSION     WP_235203004.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 323)
  AUTHORS   Iyer,L.M., Burroughs,A.M. and Aravind,L.
  TITLE     The prokaryotic antecedents of the ubiquitin-signaling system and
            the early evolution of ubiquitin-like beta-grasp domains
  JOURNAL   Genome Biol 7 (7), R60 (2006)
   PUBMED   16859499
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14452.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         1..323
                     /product="multiubiquitin domain-containing protein"
                     /calculated_mol_wt=36171
     Region          48..121
                     /region_name="Multi_ubiq"
                     /note="Multiubiquitin; pfam14452"
                     /db_xref="CDD:433963"
     Region          125..189
                     /region_name="Multi_ubiq"
                     /note="Multiubiquitin; pfam14452"
                     /db_xref="CDD:433963"
     Region          203..319
                     /region_name="Prok-E2_E"
                     /note="Prokaryotic E2 family E; pfam14462"
                     /db_xref="CDD:433971"
ORIGIN      
        1 mstwvsfqsa eepllgqfsv sgnnnripve dvgaairegr plnpahfysi iiadeqlser
       61 hlqlsdpvpt grqiliaagv rqvdeysiya ilpsgefedl rldetydlre rgaekfiifq
      121 tdrsfkfsid dksmewgkpa isgkvlktla gvpaetydvy levrggqdll irdsdlidlg
      181 kpgierfitl irdttegltg lpeadqrylq rhgipaqvvc egphtgvvlq qvqlpenkfd
      241 hpaadilvil ppgypdvapd mffcdpwlkl vtvgryatca dqphvfsgrn wqrwsrhnsa
      301 wrpgvdglht mikriehalm eak
//
LOCUS       WP_235203055             683 aa            linear   BCT 02-MAR-2025
DEFINITION  c-type cytochrome, partial [Bordetella bronchiseptica].
ACCESSION   WP_235203055
VERSION     WP_235203055.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012264.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00034.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         <1..683
                     /product="c-type cytochrome"
                     /GO_function="GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
     Region          <1..527
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          <8..>85
                     /region_name="CoxL"
                     /note="Aldehyde, CO or xanthine dehydrogenase, Mo-binding
                     subunit [Energy production and conversion]; COG1529"
                     /db_xref="CDD:441138"
     Region          476..663
                     /region_name="CccA"
                     /note="Cytochrome c, mono- and diheme variants [Energy
                     production and conversion]; COG2010"
                     /db_xref="CDD:441613"
ORIGIN      
        1 aapadappyr fgavrlaads qgtlppgaar lpgqraaqvf alesfldeaa iragvdpvey
       61 rlrhlddarg aalirqvaqq agwqasgrgg rggrgfayas viddsvdppl rswsawvadv
      121 svdpdsggva ltrvvvghdl eataapgqda prieqhlrdt agrllgppaa yddwsvpaap
      181 iagqlptpev vrpasalatp talawsdtas lpaaaavana ifdatgirlr eppfngaqar
      241 ralsaaapar rgnrgayawl ggiaaaaagl vvaawpwrpa iapvagpepg lysaaaierg
      301 rlvaaagdcv vchtapggap nagglaldtp fgaiyttnit pdvatgigqw syaaferamr
      361 qgihrdgrql ypafpytsfa klseadmqal yaylmaqppv aatppptrlp fpynlrplma
      421 gwnalfhdar pyqpdperst lwnrgaylvq gaghcgacht prnslgaerg gerhflgggv
      481 aegwdapaln alsrapvpwt eqdlyaylrt gfsarhgvaa gpmapvvqsm aqlpdadvra
      541 mahylsslsp aadsagveaa vqalerasep garllppnge rlfqgacavc hetrhtapqf
      601 gvrpslalnt nlhsarpdnl iqvilhgive pangqlgymp afgdsldagq iaelvqymra
      661 rfapgepawq dvaqrvrels rqe
//
LOCUS       WP_235203011             188 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6402 family protein [Pseudomonas syringae].
ACCESSION   WP_235203011
VERSION     WP_235203011.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 188)
  AUTHORS   Zhou,Q., Grundmann,F., Kaiser,M., Schiell,M., Gaudriault,S.,
            Batzer,A., Kurz,M. and Bode,H.B.
  TITLE     Structure and biosynthesis of xenoamicins from entomopathogenic
            Xenorhabdus
  JOURNAL   Chemistry 19 (49), 16772-16779 (2013)
   PUBMED   24203528
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039427.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19940.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         1..188
                     /product="DUF6402 family protein"
                     /calculated_mol_wt=21329
     Region          <38..176
                     /region_name="DUF6402"
                     /note="Family of unknown function (DUF6402); pfam19940"
                     /db_xref="CDD:437772"
ORIGIN      
        1 mfgdlsnppi wqhehwqfrl fkidttqidr gkvflngldd lfgalasfgl ylsasgtvtp
       61 dakivdtgsv fkvvatnyqi eithiaiyar dtydfigdqy lghwnkngve vifnyileek
      121 igtlaprdyq psgdppdmkl pvgnwsfney rkkhskggdl lifsdlktir lkrplrynit
      181 srqvaqls
//
LOCUS       WP_235203094              48 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Vibrio fluvialis].
ACCESSION   WP_235203094
VERSION     WP_235203094.1
KEYWORDS    RefSeq.
SOURCE      Vibrio fluvialis
  ORGANISM  Vibrio fluvialis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 48)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..48
                     /organism="Vibrio fluvialis"
                     /db_xref="taxon:676"
     Protein         1..>48
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>48
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 mskekfertk phvnvgtigh vdhgkttlta aicttlskvy ggaardfa
//
LOCUS       WP_235203141              39 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2474 family protein [Vibrio fluvialis].
ACCESSION   WP_235203141
VERSION     WP_235203141.1
KEYWORDS    RefSeq.
SOURCE      Vibrio fluvialis
  ORGANISM  Vibrio fluvialis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022085.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10617.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..39
                     /organism="Vibrio fluvialis"
                     /db_xref="taxon:676"
     Protein         1..39
                     /product="DUF2474 family protein"
                     /calculated_mol_wt=4196
ORIGIN      
        1 mnhhlkekpr stamdllwmg aiwtgsvltl gvvamgfra
//
LOCUS       WP_235203194             345 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Vibrio fluvialis].
ACCESSION   WP_235203194
VERSION     WP_235203194.1
KEYWORDS    RefSeq.
SOURCE      Vibrio fluvialis
  ORGANISM  Vibrio fluvialis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 345)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Vibrio fluvialis"
                     /db_xref="taxon:676"
     Protein         1..345
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=37781
     Region          <108..318
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            155..188
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 mlsanqiepg kvsapqknva kkavvpaadn aqteqlesvi tlnlnrirdp lqkqhriide
       61 svetlnesff glqtvseqqs aisstlvnnl lanqnseysl ttvlprteai ineyvstlln
      121 vsekstsava sirdmsnkld vvfklldqvr glseqtnlla lnaaieaara geagrgfavv
      181 aqevrnlsvk aselnsqiek eiqiaqqtvk eanktvgema sidmshveas khkvddmlhg
      241 vqqvnteier evqkiqelgk alvkhvsdgv rslqfadivi qqgdyaqdsl nyleeavgll
      301 gvlrrntqel nevteqiqhl qersskrsap aanqscmdeg evelf
//
LOCUS       WP_235203159             184 aa            linear   BCT 02-MAR-2025
DEFINITION  MauE/DoxX family redox-associated membrane protein [Vibrio
            fluvialis].
ACCESSION   WP_235203159
VERSION     WP_235203159.1
KEYWORDS    RefSeq.
SOURCE      Vibrio fluvialis
  ORGANISM  Vibrio fluvialis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 184)
  AUTHORS   van der Palen,C.J., Reijnders,W.N., de Vries,S., Duine,J.A. and van
            Spanning,R.J.
  TITLE     MauE and MauD proteins are essential in methylamine metabolism of
            Paracoccus denitrificans
  JOURNAL   Antonie Van Leeuwenhoek 72 (3), 219-228 (1997)
   PUBMED   9403107
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018942.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07291.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Vibrio fluvialis"
                     /db_xref="taxon:676"
     Protein         1..184
                     /product="MauE/DoxX family redox-associated membrane
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0030416 - methylamine metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=20273
     Region          16..159
                     /region_name="DoxX"
                     /note="cl21527"
                     /db_xref="CDD:451291"
ORIGIN      
        1 mstswitqyh ltimtffalv fiqaalhkga dlrrfsgyis hysrhfeqha yplavlllvg
       61 eiaavvlsit patnmagell mlllligytl amsmqlksgn reidcgcggt pivvsrrtll
      121 rnailitlag smlmtanqpi tslsllmaia ggvilwfgyy lleqlmhnhd lilklaqhdq
      181 ekdi
//
LOCUS       WP_235203247             234 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding enzyme, partial [Pseudomonas syringae].
ACCESSION   WP_235203247
VERSION     WP_235203247.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024591.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13193.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         <1..>234
                     /product="AMP-binding enzyme"
     Region          <42..234
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
ORIGIN      
        1 gselaresds pafpsrknvq tssraseasp sslpqlpcfp qstahsgdpl rsvpvgtplp
       61 gasayvlddv lnpvgtqvag elyiggdsva lgyigqpalt aerfvpdpfa qdgtrvyrsg
      121 drmrrnhqgl lefigraddq vkvrgyrvep aevarvllgl psvaqvsvla lpidddqtrl
      181 qlvaycvaag gadlsidslr eqltaclpdy mvpaqimlld slpltangkl dkra
//
LOCUS       WP_235203254             607 aa            linear   BCT 02-MAR-2025
DEFINITION  phospholipase D-like domain-containing protein [Pseudomonas
            syringae].
ACCESSION   WP_235203254
VERSION     WP_235203254.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13091.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         1..607
                     /product="phospholipase D-like domain-containing protein"
                     /calculated_mol_wt=66863
     Region          439..583
                     /region_name="PLDc_2"
                     /note="PLD-like domain; pfam13091"
                     /db_xref="CDD:463784"
ORIGIN      
        1 mkgnagteek nsfswlknkl stvslnqqkk qaiqnfiaqa shqynvdedv aklavaasgv
       61 yrqprfeetq qqrvhaclqn tealtamidl aarkpltykm vmgldssdcs fdpvarisdh
      121 dilteaeqcq vvrsafasad kvcvvtsygi kplgapksda lsptiasvlq gfaskqhdkd
      181 ftgvffyqks daiqnyyted krtnisiken dwakvvtlfn aavergeleg pkleniqanl
      241 fflagepkgf agshhdkfiv ndnglcvtmg aslgniakpn wmdsgcvtls nslaseqltn
      301 fldnqsetai kgslfnkren hcakldnleg rvvqraaiks rdiysalmpi vvenagkkln
      361 ainttngtaq eqffkdifna qgfdlghskk ksiawiknkg sndtsggfer pigkalktml
      421 tnvapgekvc irngssrrfd egvckllana aqkgaklqil tsladgfnqi nylreqilkn
      481 lkgseadkqs alanidvrif nreshlvdig eqrgwpsrfe dkgfkdhgkl fgvlkadgna
      541 evmtgtynld sqsvrrsfen mqviddkdgs flhagfsqyf asdnppinfg tqspekirqt
      601 iegmwkk
//
LOCUS       WP_235203310             615 aa            linear   BCT 02-MAR-2025
DEFINITION  FG-GAP-like repeat-containing protein [Candidatus Magnetobacterium
            casense].
ACCESSION   WP_235203310
VERSION     WP_235203310.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Magnetobacterium casense
  ORGANISM  Candidatus Magnetobacterium casense
            Bacteria; Pseudomonadati; Nitrospirota; Thermodesulfovibrionia;
            Thermodesulfovibrionales; Candidatus Magnetobacteriaceae;
            Candidatus Magnetobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13517.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Candidatus Magnetobacterium casense"
                     /db_xref="taxon:1455061"
     Protein         1..615
                     /product="FG-GAP-like repeat-containing protein"
                     /calculated_mol_wt=64511
     Region          <16..>218
                     /region_name="PRK08026"
                     /note="FliC/FljB family flagellin"
                     /db_xref="CDD:236140"
     Region          183..261
                     /region_name="Flg_new_2"
                     /note="Divergent InlB B-repeat domain; pfam18998"
                     /db_xref="CDD:436898"
     Region          273..333
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          322..382
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          371..437
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          426..483
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          472..532
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          521..581
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
ORIGIN      
        1 mtispittvg ssptytlnvt kdgtgsgvit astgtltwnd ntgtttyasg tsvtltatad
       61 tgskfdnwtg cdstngnqct vtmsaaknvt atfssqgtya ltvtktgsgt vtdstgtltw
      121 ndntgtatyt sgtsvtltat ptqeskfggw tgcdstsgnq ctitmsaakn itatfssqgq
      181 ttyaltvtks gsgtvtastg tltwndntgt ttyasgtsvt ltatptqesk fggwtgcdst
      241 sgnqctvams snrsvsvsft qgvcllcrip rmdfngngks dilwrnmsng miytwlmngi
      301 niangdspat lgdewqiesm gdfngdgrsd imwrntsngm vyiwlmggtn vagggspatl
      361 ghewqiesig dfngdgrsdi mwrntsngmv ytwfmngani aggaspssls qpssvdsawq
      421 vvssgdfdgd dtsdvlwint stgmtyiwfm ngkaggspgt vgtewqiacv sdfngdgktd
      481 ilwrnistgm vyiwlmngat iagggspati dlewqivnvg dfngdgksdl lwrntendmv
      541 ytwlmngtti tggdltakag tqwqiisvgd fngdgkrdiv wrnsatgeic iwlmdgtqls
      601 lgglpavlgt ewqiq
//
LOCUS       WP_235203282             561 aa            linear   BCT 02-MAR-2025
DEFINITION  FG-GAP-like repeat-containing protein [Candidatus Magnetobacterium
            casense].
ACCESSION   WP_235203282
VERSION     WP_235203282.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Magnetobacterium casense
  ORGANISM  Candidatus Magnetobacterium casense
            Bacteria; Pseudomonadati; Nitrospirota; Thermodesulfovibrionia;
            Thermodesulfovibrionales; Candidatus Magnetobacteriaceae;
            Candidatus Magnetobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13517.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Candidatus Magnetobacterium casense"
                     /db_xref="taxon:1455061"
     Protein         1..561
                     /product="FG-GAP-like repeat-containing protein"
                     /calculated_mol_wt=59718
     Region          <11..63
                     /region_name="BACON"
                     /note="Bacteroidetes-Associated Carbohydrate-binding
                     (putative) Often N-terminal (BACON) domain; cl15232"
                     /db_xref="CDD:449511"
     Region          91..168
                     /region_name="BACON"
                     /note="Bacteroidetes-Associated Carbohydrate-binding
                     (putative) Often N-terminal (BACON) domain; cd14948"
                     /db_xref="CDD:271342"
     Region          266..327
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          316..376
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          365..426
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          415..476
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          465..526
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
ORIGIN      
        1 mtvetsdnmg cawmayanks wiklndnyes avksvfsytv epntttssrt gkivfkniea
       61 vitqdgqtsp tptptpmitp tptpncstta igpssnnfta tggsgsvsvt antgctwnas
      121 snaswitlty glsgsgngtv nytvaantst tsrtgtmtia gqtftvtqgg qqsgqlmltv
      181 tkqgtgdgtv tatnggitwn gktgtasydk dtsvtltaap algstikawt gcdlnigsnq
      241 cmvkmttdks isiefdggsg kkvehdfngd ghsdilwrnt ktgdvyiwlm dgtkitggnf
      301 iakgitadwn vkaigdfngd gksdvmwqnn agdvyiwivn gttittggfa vrgmpgewev
      361 ttlgdfngdg ntdimwrntn sgdiyvwfld attisgggyl irgmmsewvv kavadfngdg
      421 ksdvlwqntt tgdvamwlmd slsmstgnyv vravpnewqi kavndfdgdg kadiiwqntn
      481 tgdvviwlmn gmsissgdfi qrgvprnwqi kvagdyngdg kadilwqett ngdvymyvmd
      541 gknitdggyv afglgtdwqp k
//
LOCUS       WP_235202986             297 aa            linear   BCT 02-MAR-2025
DEFINITION  aspartyl/asparaginyl beta-hydroxylase domain-containing protein
            [Pseudomonas syringae].
ACCESSION   WP_235202986
VERSION     WP_235202986.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 297)
  AUTHORS   Jia,S., McGinnis,K., VanDusen,W.J., Burke,C.J., Kuo,A.,
            Griffin,P.R., Sardana,M.K., Elliston,K.O., Stern,A.M. and
            Friedman,P.A.
  TITLE     A fully active catalytic domain of bovine aspartyl (asparaginyl)
            beta-hydroxylase expressed in Escherichia coli: characterization
            and evidence for the identification of an active-site region in
            vertebrate alpha-ketoglutarate-dependent dioxygenases
  JOURNAL   Proc Natl Acad Sci U S A 91 (15), 7227-7231 (1994)
   PUBMED   8041771
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016974.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05118.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         1..297
                     /product="aspartyl/asparaginyl beta-hydroxylase
                     domain-containing protein"
                     /GO_process="GO:0018193 - peptidyl-amino acid modification
                     [Evidence IEA]"
                     /calculated_mol_wt=33825
     Region          18..281
                     /region_name="Asp_Arg_Hydrox"
                     /note="Aspartyl/Asparaginyl beta-hydroxylase; cl42444"
                     /db_xref="CDD:478204"
ORIGIN      
        1 mryerfsqyl rkswpvfapf ncflyaftha harksvtdtl hfpgtnllre nwqiirneal
       61 aldkqgvfes ivkegspgfy dvgfrtfykh gwskfyltwy ghnhpsaqrl cpqttallek
      121 vpgikgamfs llpagasltl hadplacslr yhlglktpqs dscfinvdgv tttwrdgedf
      181 ifdetrphyv hnhskaprli lmcdierpmy lpgrlfnrly sqlarltvva nteedargaa
      241 salfdrlnpv lkrgkrlkst nkalynilkw aingsllmfi fgslftvsaa vdyltfn
//
LOCUS       WP_235203280             221 aa            linear   BCT 02-MAR-2025
DEFINITION  radical SAM protein [Candidatus Magnetobacterium casense].
ACCESSION   WP_235203280
VERSION     WP_235203280.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Magnetobacterium casense
  ORGANISM  Candidatus Magnetobacterium casense
            Bacteria; Pseudomonadati; Nitrospirota; Thermodesulfovibrionia;
            Thermodesulfovibrionales; Candidatus Magnetobacteriaceae;
            Candidatus Magnetobacterium.
REFERENCE   1  (residues 1 to 221)
  AUTHORS   Benjdia,A., Leprince,J., Guillot,A., Vaudry,H., Rabot,S. and
            Berteau,O.
  TITLE     Anaerobic sulfatase-maturating enzymes: radical SAM enzymes able to
            catalyze in vitro sulfatase post-translational modification
  JOURNAL   J Am Chem Soc 129 (12), 3462-3463 (2007)
   PUBMED   17335281
REFERENCE   2  (residues 1 to 221)
  AUTHORS   Berteau,O., Guillot,A., Benjdia,A. and Rabot,S.
  TITLE     A new type of bacterial sulfatase reveals a novel maturation
            pathway in prokaryotes
  JOURNAL   J Biol Chem 281 (32), 22464-22470 (2006)
   PUBMED   16766528
REFERENCE   3  (residues 1 to 221)
  AUTHORS   Sofia,H.J., Chen,G., Hetzler,B.G., Reyes-Spindola,J.F. and
            Miller,N.E.
  TITLE     Radical SAM, a novel protein superfamily linking unresolved steps
            in familiar biosynthetic pathways with radical mechanisms:
            functional characterization using new analysis and information
            visualization methods
  JOURNAL   Nucleic Acids Res 29 (5), 1097-1106 (2001)
   PUBMED   11222759
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015983.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04055.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Candidatus Magnetobacterium casense"
                     /db_xref="taxon:1455061"
     Protein         1..221
                     /product="radical SAM protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0051539 - 4 iron, 4 sulfur cluster
                     binding [Evidence IEA]"
                     /calculated_mol_wt=24399
     Region          11..215
                     /region_name="rSAM_QueE_gams"
                     /note="putative 7-cyano-7-deazaguanosine (preQ0)
                     biosynthesis protein QueE, gammaproteobacterial type;
                     TIGR04349"
                     /db_xref="CDD:275145"
ORIGIN      
        1 mtsdsgmnet lkvcefftsi qgessyaglp cvfirltgcn lrcnycdtry aytegtdmsv
       61 adlldkvqgt hirlveltgg epliqsatpv lidalvdmgl rtlietngsi nighfnrsav
      121 fivdlkapss gmvdhndlsn lkalsptdev kivlgnrddy rwaseliary rltqrchvll
      181 spvagvlqae tlaawilqda levrlnlqlh kyiygtdrrm v
//
LOCUS       WP_235203376             917 aa            linear   BCT 02-MAR-2025
DEFINITION  protein kinase domain-containing protein [Sulfuriroseicoccus
            oceanibius].
ACCESSION   WP_235203376
VERSION     WP_235203376.1
KEYWORDS    RefSeq.
SOURCE      Sulfuriroseicoccus oceanibius
  ORGANISM  Sulfuriroseicoccus oceanibius
            Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
            Verrucomicrobiales; Verrucomicrobiaceae; Sulfuriroseicoccus.
REFERENCE   1  (residues 1 to 917)
  AUTHORS   Hunter,T. and Plowman,G.D.
  TITLE     The protein kinases of budding yeast: six score and more
  JOURNAL   Trends Biochem Sci 22 (1), 18-22 (1997)
   PUBMED   9020587
REFERENCE   2  (residues 1 to 917)
  AUTHORS   Hanks,S.K. and Hunter,T.
  TITLE     Protein kinases 6. The eukaryotic protein kinase superfamily:
            kinase (catalytic) domain structure and classification
  JOURNAL   FASEB J 9 (8), 576-596 (1995)
   PUBMED   7768349
REFERENCE   3  (residues 1 to 917)
  AUTHORS   Hanks,S.K. and Quinn,A.M.
  TITLE     Protein kinase catalytic domain sequence database: identification
            of conserved features of primary structure and classification of
            family members
  JOURNAL   Methods Enzymol 200, 38-62 (1991)
   PUBMED   1956325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00069.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..917
                     /organism="Sulfuriroseicoccus oceanibius"
                     /db_xref="taxon:2707525"
     Protein         1..917
                     /product="protein kinase domain-containing protein"
                     /GO_function="GO:0004672 - protein kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006468 - protein phosphorylation
                     [Evidence IEA]"
                     /calculated_mol_wt=100979
     Region          12..481
                     /region_name="SPS1"
                     /note="Serine/threonine protein kinase [Signal
                     transduction mechanisms]; COG0515"
                     /db_xref="CDD:440281"
     Region          549..621
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
     Region          <649..858
                     /region_name="YfmG"
                     /note="Formylglycine-generating enzyme, required for
                     sulfatase activity, contains SUMF1/FGE domain
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1262"
                     /db_xref="CDD:440874"
ORIGIN      
        1 msqpaapsip dyqilrrigv gsygdvwlgk gvtgafraik vvhrsnfdde atferefdgi
       61 lqyeqrsren pglvailhvg rntedgfyyy vmelgddver gadvnpidye prtlqsdvrr
      121 agrlpleecl qigmtlagal ehlhvhglah rdikpanvif vngrakladv glvapvgrrs
      181 fvgtmgfvpp egpgtpaadv yslgmvlyei ssgrdrmdfp elpedfddae qwalwrslnd
      241 vlcqacapvl ddrldsaavl gemlsdvaeg revrrvnark rrvrwvgvvg mvafvalvgv
      301 lvstlagwqs agdavgdvdg wrdgqpvisa edaarrggsg gtgvempdva emtsvvkfis
      361 epeaaevyhn geliattpqt vddlgvgpqv fvfrktnhrd evvevdlrdg rrnvvaatlg
      421 kwqppragvp wrnefgmlfa psgdehvsit pvttdvyref vglgpdmlqs tlvevvapdg
      481 gsesvdvvml serkmkpfae wltrhsildg fmseedyyvf aandkvpakt tsggevlray
      541 dlvvrkrvfg gvhlitsppg amvsdsggri lpgvtplvle rlkpgsrvfe fhldgyetrt
      601 vtvdieanev atvnvdlpes rgvvfsrpwt nslemkfvpn gglmwsiwet rvqdwrrfee
      661 etgrealrap lfkqgpthpw grasredaea fcewltrker aeglirnsye yrlptdrews
      721 lvvgldeaph sepveldgvd trqfpwgrqf pppnrvgnya dddappflqr lgvldgyvdg
      781 arftapvgsy apsksglydl ggnvwewvsd pyggrmanha vcrgaswgda rrdtllssmr
      841 nvfspdyrgd glygfrvvia rvpaesfdpf adgpagngre rrgeatdlgg plrdsgadvg
      901 tsifdfdsde myertse
//
LOCUS       WP_235203501             274 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Sulfuriroseicoccus oceanibius].
ACCESSION   WP_235203501
VERSION     WP_235203501.1
KEYWORDS    RefSeq.
SOURCE      Sulfuriroseicoccus oceanibius
  ORGANISM  Sulfuriroseicoccus oceanibius
            Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
            Verrucomicrobiales; Verrucomicrobiaceae; Sulfuriroseicoccus.
REFERENCE   1  (residues 1 to 274)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 274)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Sulfuriroseicoccus oceanibius"
                     /db_xref="taxon:2707525"
     Protein         1..274
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=29411
     Region          93..268
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(138,140,142..143,194..195,215,253)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 mmipledefc dvmgkvlrgt nmtpgilefl tgvpeatiet vldgepdect vrrlapalgl
       61 dgeslvammt gksappaiev pglrafnvaf ddmtvnyyvv wdatskralm fdtganadea
      121 lewmahegls ldavllshsh ldhiadvekv rarypearvl mnayeacegv erflpgqsfq
      181 fggfevgtam vrghspgatv ytvtglsrrl vvvgdalfar smggplisld galegarqai
      241 fslpddtvlc pghgplttva dektnnpffp efkd
//
LOCUS       WP_235203507             666 aa            linear   BCT 02-MAR-2025
DEFINITION  sodium:solute symporter family transporter [Sulfuriroseicoccus
            oceanibius].
ACCESSION   WP_235203507
VERSION     WP_235203507.1
KEYWORDS    RefSeq.
SOURCE      Sulfuriroseicoccus oceanibius
  ORGANISM  Sulfuriroseicoccus oceanibius
            Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
            Verrucomicrobiales; Verrucomicrobiaceae; Sulfuriroseicoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012686.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00474.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Sulfuriroseicoccus oceanibius"
                     /db_xref="taxon:2707525"
     Protein         1..666
                     /product="sodium:solute symporter family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /note="Members of the Solute:Sodium Symporter (SSS), TC
                     2.A.21 as described in tcdb.org, catalyze solute:Na+
                     symport. Known solutes for members of the family include
                     sugars, amino acids, nucleosides, inositols, vitamins,
                     urea or anions, depending on the system.; Members of the
                     Solute:Sodium Symporter (SSS), TC 2.A.21 as described in
                     tcdb.org, catalyze solute:Na+ symport. Known solutes for
                     members of the family include sugars, amino acids,
                     nucleosides, inositols, vitamins, urea or anions,
                     depending on the system."
                     /calculated_mol_wt=72081
     Region          7..666
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     Site            order(57,60,474,477..478)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271360"
ORIGIN      
        1 mnylelvlfv gavigvitlg iwkskgerth dsekgasdyf lagrgltwwl vgfsliaani
       61 steqfvgmsg qaadwlgmai asyewmaavt lvivgfwflp kflkaglyti peflqyrfdg
      121 varmamaipm ivtlvfvtts svifsggkfi seyykdvpvl nnltavcwli aaaaaiyvfi
      181 gglkaaawtd liwgaalivg gaivmflafs hlsdapaeel iktkvansta tvedienaga
      241 idrlillndg kegeavaqng pngsggkmhm irpkedtdip wtalllglwi pnlyywglnq
      301 yivqrtlgsk slaegqkgiv faaglklvvp flvvipgila fnlfsgdlhd saetrnskam
      361 egiketqaik vdrafvtmqp eqvavlvern aklageevev paeatpedlv alvngladka
      421 vekdveangd natiavgpkm vgydydaafp ilvrnlvkdh wyiswfvlaa lcgavissla
      481 smlnsastia tmdlyanfsg qkdqaklvvv grvfvilfvi lagliapaln nfssifayiq
      541 efqgfispgi lavfifgffs prtprwfgav giglnivsya afkwvlgpwi tkngwwysdd
      601 mafldrmglc fiivllagai vtmiapmrkp vempetkeie letssgakla gglvvlatla
      661 lyvifw
//
LOCUS       WP_235203535             307 aa            linear   BCT 02-MAR-2025
DEFINITION  YceI family protein [Sulfuriroseicoccus oceanibius].
ACCESSION   WP_235203535
VERSION     WP_235203535.1
KEYWORDS    RefSeq.
SOURCE      Sulfuriroseicoccus oceanibius
  ORGANISM  Sulfuriroseicoccus oceanibius
            Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
            Verrucomicrobiales; Verrucomicrobiaceae; Sulfuriroseicoccus.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Handa,N., Terada,T., Doi-Katayama,Y., Hirota,H., Tame,J.R.,
            Park,S.Y., Kuramitsu,S., Shirouzu,M. and Yokoyama,S.
  TITLE     Crystal structure of a novel polyisoprenoid-binding protein from
            Thermus thermophilus HB8
  JOURNAL   Protein Sci 14 (4), 1004-1010 (2005)
   PUBMED   15741337
REFERENCE   2  (residues 1 to 307)
  AUTHORS   Stancik,L.M., Stancik,D.M., Schmidt,B., Barnhart,D.M.,
            Yoncheva,Y.N. and Slonczewski,J.L.
  TITLE     pH-dependent expression of periplasmic proteins and amino acid
            catabolism in Escherichia coli
  JOURNAL   J Bacteriol 184 (15), 4246-4258 (2002)
   PUBMED   12107143
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016176.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04264.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Sulfuriroseicoccus oceanibius"
                     /db_xref="taxon:2707525"
     Protein         1..307
                     /product="YceI family protein"
                     /calculated_mol_wt=33391
     Region          6..103
                     /region_name="PspE"
                     /note="Rhodanese-related sulfurtransferase [Inorganic ion
                     transport and metabolism]; COG0607"
                     /db_xref="CDD:440372"
     Region          131..302
                     /region_name="YceI"
                     /note="Polyisoprenoid-binding periplasmic protein YceI
                     [General function prediction only]; COG2353"
                     /db_xref="CDD:441920"
ORIGIN      
        1 mmnqliatda lhelmekpge tmhlidvrlp adyaaahlpg avnacvfemg fgdnikqavp
       61 dvsdlvvvyg ahassyesrv alekllrlgf tnvheyrvgl agwpgevvrd qeapavdded
      121 apqvrdgrhl vdleqsevhw vgrnllnhhe gsirlqngfv hisdgqlvgg efmidmtsmr
      181 csdlagdamh dvliahlesd dffdvekfpt aafcietver lpvtapgrpd lritgdlrir
      241 dvdvpiefda vtgvtadgvm aaqaslkidr tlwgvlygsg sffanlgmhl vndlvaidlk
      301 vviandg
//
LOCUS       WP_235203595             205 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase domain-containing protein [Sulfuriroseicoccus
            oceanibius].
ACCESSION   WP_235203595
VERSION     WP_235203595.1
KEYWORDS    RefSeq.
SOURCE      Sulfuriroseicoccus oceanibius
  ORGANISM  Sulfuriroseicoccus oceanibius
            Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
            Verrucomicrobiales; Verrucomicrobiaceae; Sulfuriroseicoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025033.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13649.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Sulfuriroseicoccus oceanibius"
                     /db_xref="taxon:2707525"
     Protein         1..205
                     /product="methyltransferase domain-containing protein"
                     /calculated_mol_wt=22424
     Region          2..181
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(52..58,76..77,93..95,111)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
ORIGIN      
        1 mepeildgla eddpravrsr gdlrfinlmm ggerwivrav sqfsqattvv dlgagegrla
       61 nrikraypql dvvavdlhar ppgldtgirw lqgdaldgnl hfgrdaivva nlflhhfges
      121 qleqlgqrfs dvggwlchep hrsagalfwg rlllpfvgsv trhdmmvsir agfvpdelrk
      181 vigtsgdwse avstfgglrs kvvcv
//
LOCUS       WP_235203649             225 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1573 domain-containing protein [Sulfuriroseicoccus oceanibius].
ACCESSION   WP_235203649
VERSION     WP_235203649.1
KEYWORDS    RefSeq.
SOURCE      Sulfuriroseicoccus oceanibius
  ORGANISM  Sulfuriroseicoccus oceanibius
            Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
            Verrucomicrobiales; Verrucomicrobiaceae; Sulfuriroseicoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07610.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Sulfuriroseicoccus oceanibius"
                     /db_xref="taxon:2707525"
     Protein         1..225
                     /product="DUF1573 domain-containing protein"
                     /calculated_mol_wt=24393
     Region          27..127
                     /region_name="DUF1573"
                     /note="Protein of unknown function (DUF1573); cl44563"
                     /db_xref="CDD:479786"
ORIGIN      
        1 mcscvigrlf qvllvllvag dvwagaltfe savveipvep dknevsvrfl yenqtggpvd
       61 vvefrtgcga clsvgpkrmv esggkghvda lfkvgsksga veksvtvvma dasgarseqv
      121 ltlravvpel vvvsekklqw rvgeagvtrs vevtmdwesp irvmaatstr knmevrvvev
      181 vagqryridv tpfelqgaql gmirietdcp iekyrkhvif aqvtr
//
LOCUS       WP_235203749             124 aa            linear   BCT 02-MAR-2025
DEFINITION  glutathione S-transferase N-terminal domain-containing protein,
            partial [Bordetella bronchiseptica].
ACCESSION   WP_235203749
VERSION     WP_235203749.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024809.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13417.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..>124
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /GO_process="GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
     Region          1..79
                     /region_name="GST_N_Ure2p_like"
                     /note="GST_N family, Ure2p-like subfamily; composed of the
                     Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is
                     a regulator for nitrogen catabolism in yeast. It represses
                     the expression of several gene products involved in the
                     use of poor nitrogen sources...; cd03048"
                     /db_xref="CDD:239346"
     Site            order(10..11,14,17,20..21,77)
                     /site_type="other"
                     /note="C-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:239346"
     Site            order(11,51..53,71..72)
                     /site_type="other"
                     /note="GSH binding site (G-site) [chemical binding]"
                     /db_xref="CDD:239346"
     Site            order(48..49,51,68,70..71,74)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239346"
ORIGIN      
        1 midlyywttp nghkitlfle etglpyrihp vniskgeqfq peflaiapnn ripaivdqap
       61 adggapiplf esgaillylp ripaarlgvr adaqwqnwag gveyfhvyrq ddiaayesst
      121 pgyd
//
LOCUS       WP_235203766             843 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein [Pseudomonas chlororaphis].
ACCESSION   WP_235203766
VERSION     WP_235203766.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas chlororaphis
  ORGANISM  Pseudomonas chlororaphis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Pseudomonas chlororaphis"
                     /db_xref="taxon:587753"
     Protein         1..843
                     /product="cadherin-like domain-containing protein"
                     /calculated_mol_wt=86727
     Region          352..594
                     /region_name="COG2931"
                     /note="Ca2+-binding protein, RTX toxin-related [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:442175"
     Region          <624..695
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          715..>811
                     /region_name="Peptidases_S8_S53"
                     /note="Peptidase domain in the S8 and S53 families;
                     cl10459"
                     /db_xref="CDD:415849"
ORIGIN      
        1 mannryklye kddaaqvvpr kdlvnidinp spqpqqhiqg eskaqqdvan gfiqnsatns
       61 ifavggilsk tdftstqmas lasggirpge mqldpnarpn tyltqfyqps spnkpdfslr
      121 navtlnglsa mttfntyvdp llldltgngv hmtdirdgvl fdtdhsgtlk rsgwadrstg
      181 mlviddgsgq ikdvsqmfse yyggkagvng aagetkfkdg faalasedan kdgvidqrdp
      241 iwsklrvwvd gthdakvdag elktlaelgi tqinvraats tqtevrdgnr vlatgsftin
      301 gksqealavd flgdpvsntl taqgagtkvt sttngittta yasqsttget ldaaqlgvgn
      361 lyggsgndtl iaapaggwlv ggggsnsyvg gkgddvfvis asddpknihg ngghdtaiiv
      421 gdkgvvlnma qagltiaqgg sgddtlisgg tgsafikggs gnstlvggag sdvlvggsgh
      481 ntiiggsgka viyagpqgdv iyaaeggsii hagggadrif ggagndviev ghgnatidgg
      541 gginlvtlhg nhgdyritrt dsgyevadkv agrdgtvtlk niqklnfsdi savdlqtpna
      601 mpvadvltld kdgkafnrtq ahlisaqsll andqhlnsqg alrianvgda vggtvsltaq
      661 gdvlftpdar ytgllsfkyg vvdaagnlsa svvdlssgqt apmragvtll tpevpldpla
      721 aqerylsdtn vlpvwqdytg kgvrigqfep ggqfatapei fdiahpdlaa nvdkawlqtq
      781 qsngslpglv snhatmvagv mvaakngvhp rphggggdgr gqewrgwggg glwrdagrll
      841 pgq
//
LOCUS       WP_235203526             168 aa            linear   BCT 02-MAR-2025
DEFINITION  CD225/dispanin family protein [Sulfuriroseicoccus oceanibius].
ACCESSION   WP_235203526
VERSION     WP_235203526.1
KEYWORDS    RefSeq.
SOURCE      Sulfuriroseicoccus oceanibius
  ORGANISM  Sulfuriroseicoccus oceanibius
            Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
            Verrucomicrobiales; Verrucomicrobiaceae; Sulfuriroseicoccus.
REFERENCE   1  (residues 1 to 168)
  AUTHORS   Sallman Almen,M., Bringeland,N., Fredriksson,R. and Schioth,H.B.
  TITLE     The dispanins: a novel gene family of ancient origin that contains
            14 human members
  JOURNAL   PLoS One 7 (2), e31961 (2012)
   PUBMED   22363774
REFERENCE   2  (residues 1 to 168)
  AUTHORS   Deblandre,G.A., Marinx,O.P., Evans,S.S., Majjaj,S., Leo,O.,
            Caput,D., Huez,G.A. and Wathelet,M.G.
  TITLE     Expression cloning of an interferon-inducible 17-kDa membrane
            protein implicated in the control of cell growth
  JOURNAL   J Biol Chem 270 (40), 23860-23866 (1995)
   PUBMED   7559564
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016394.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04505.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Sulfuriroseicoccus oceanibius"
                     /db_xref="taxon:2707525"
     Protein         1..168
                     /product="CD225/dispanin family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=17867
     Region          3..52
                     /region_name="GYF_2"
                     /note="GYF domain 2; pfam14237"
                     /db_xref="CDD:464112"
     Region          86..151
                     /region_name="CD225"
                     /note="Interferon-induced transmembrane protein;
                     pfam04505"
                     /db_xref="CDD:461336"
ORIGIN      
        1 mqwyytengt qqgpvsgeqm taliqsgrin sqslvwregm anwlpvaqvp elsahaqsgp
       61 patpqspyqt ptsappqgmh vgadipnylw qsivvtlmcc lpagvvaivy atkvdrlrfa
      121 gdqagaqaas qsaktwcwvs fgvglaglvl yfgfvflavl segrstgy
//
LOCUS       WP_235204072              42 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6396 domain-containing protein, partial [Pseudomonas syringae].
ACCESSION   WP_235204072
VERSION     WP_235204072.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040400.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19933.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..42
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         <1..42
                     /product="DUF6396 domain-containing protein"
     Region          <1..32
                     /region_name="DUF6396"
                     /note="Domain of unknown function (DUF6396); pfam19933"
                     /db_xref="CDD:437765"
ORIGIN      
        1 reanipppkp sealieqlak amvldpktgk plpgspvysk ed
//
LOCUS       WP_235204100             267 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase, partial [Bordetella
            bronchiseptica].
ACCESSION   WP_235204100
VERSION     WP_235204100.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
REFERENCE   1  (residues 1 to 267)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 267)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..>267
                     /product="SDR family NAD(P)-dependent oxidoreductase"
     Region          5..219
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(12,14..15,17,36..38,83..85,143..145,158,162,
                     188..191)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(111,145,158,162)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 meiankvfiv tggasglgag tvrmlvanga kvviadvqde pgqalakeln qryvhcdvtq
       61 eadgkqavaa avelgplfgl vncagvapaa kivgkngahp ldlfqkvvsi nligsfnmmr
      121 laaeamsant pestgergvl intasvaafd gqigqaayaa skagvagmtl piardlsktg
      181 ircmtiapgi fgtpmifgmp qevqdslaas ipfparlgrr tqprgtviar yrtvpaalas
      241 tatrnrpits apgsatgffr alsphlr
//
LOCUS       WP_235204115             165 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)/FAD-dependent oxidoreductase [Bordetella bronchiseptica].
ACCESSION   WP_235204115
VERSION     WP_235204115.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015451.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03486.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..165
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /calculated_mol_wt=17505
     Region          <2..165
                     /region_name="YhiN"
                     /note="Predicted flavoprotein YhiN [General function
                     prediction only]; COG2081"
                     /db_xref="CDD:441684"
ORIGIN      
        1 msgpailqis sywkpgepiv ldlapgrdla aeligakpgn rqqlhtvlag lwprrladtw
       61 ldvagravga dlaaarladv pdrtlralaa lihdwrlvps gtagykkaev mrggvdtral
      121 dqksmqargv pglyfigeav dvtgwlggyn fqwawasgya cgnal
//
LOCUS       WP_235204117             242 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Bordetella
            bronchiseptica].
ACCESSION   WP_235204117
VERSION     WP_235204117.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..>242
                     /product="Ig-like domain-containing protein"
     Region          <21..>235
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 msasdaagnr aaasaeftdq vdktaprapt lqlatdtatg rvtasgkaep gatveitwpd
       61 qtrvtvvadt sgaysatsaa dmsdgaitav aadragntga ptrqryidsv drtaptlgtp
      121 svstaadtgr vsvtgmtepg arvqveipge aprivtadaa grysvvsagd vlqsgtvrvt
      181 atdahgnasa pvhlryqdqv dktapaspsl tvredaasgr atvtgqaepg aavrvvfpng
      241 ea
//
LOCUS       WP_235204131             187 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Bordetella
            bronchiseptica].
ACCESSION   WP_235204131
VERSION     WP_235204131.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
REFERENCE   1  (residues 1 to 187)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         <1..187
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..151
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            8..41
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 vidgiafqtn ilalnaavea arageqgkgf avvagevrsl aqrsaqaake ikvliedsvg
       61 kvgtgsqqve ragatmqeiv asvkrvtdim geisaaseeq ssgieqvnra vsqmdevtqq
      121 naalveeaaa aagslqeqaq rlaeavavfr inagevidlp arqlgsrqap garetalard
      181 dalalgh
//
LOCUS       WP_235204200             332 aa            linear   BCT 02-MAR-2025
DEFINITION  CAP domain-containing protein [Deinococcus sp. RL].
ACCESSION   WP_235204200
VERSION     WP_235204200.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus sp. RL
  ORGANISM  Deinococcus sp. RL
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
REFERENCE   1  (residues 1 to 332)
  AUTHORS   Gibbs,G.M., Roelants,K. and O'Bryan,M.K.
  TITLE     The CAP superfamily: cysteine-rich secretory proteins, antigen 5,
            and pathogenesis-related 1 proteins--roles in reproduction, cancer,
            and immune defense
  JOURNAL   Endocr Rev 29 (7), 865-897 (2008)
   PUBMED   18824526
REFERENCE   2  (residues 1 to 332)
  AUTHORS   Milne,T.J., Abbenante,G., Tyndall,J.D., Halliday,J. and Lewis,R.J.
  TITLE     Isolation and characterization of a cone snail protease with
            homology to CRISP proteins of the pathogenesis-related protein
            superfamily
  JOURNAL   J Biol Chem 278 (33), 31105-31110 (2003)
   PUBMED   12759345
REFERENCE   3  (residues 1 to 332)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
REFERENCE   4  (residues 1 to 332)
  AUTHORS   Fernandez,C., Szyperski,T., Bruyere,T., Ramage,P., Mosinger,E. and
            Wuthrich,K.
  TITLE     NMR solution structure of the pathogenesis-related protein P14a
  JOURNAL   J Mol Biol 266 (3), 576-593 (1997)
   PUBMED   9067611
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012415.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00188.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Deinococcus sp. RL"
                     /db_xref="taxon:1489678"
     Protein         1..332
                     /product="CAP domain-containing protein"
                     /calculated_mol_wt=35243
     Region          40..104
                     /region_name="PKD_4"
                     /note="PKD domain; pfam18911"
                     /db_xref="CDD:436824"
     Region          181..326
                     /region_name="YkwD"
                     /note="Spore germination protein YkwD and related proteins
                     with CAP (CSP/antigen 5/PR1) domain [Cell cycle control,
                     cell division, chromosome partitioning, General function
                     prediction only]; COG2340"
                     /db_xref="CDD:441910"
ORIGIN      
        1 mrtgrwrrgg llagvamlga caaqpvafrv nfsmsearra pltvrfraea paehrvqwhf
       61 gdgqkgegrd tahtyyqpgt ytvraelldt rgrvrsvatg dvrvessgpe raalvvllgl
      121 gevrlsaags vayrpatpqf sldgqaagkg plpvsagehr agvrlpgagg vltrevtfrm
      181 aplvrsvpfe tevlrltnqa rargwncatl reggqslppl krhpelevaa laqsagmalh
      241 gyfdhrsald gstpatriqa aglraaasae niaggqatpq avvdawlrsp ghcrnimgdf
      301 thlgvahver pgtryghfwt qvfatpleag gp
//
LOCUS       WP_235204209             869 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4357 domain-containing protein [Deinococcus sp. RL].
ACCESSION   WP_235204209
VERSION     WP_235204209.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus sp. RL
  ORGANISM  Deinococcus sp. RL
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025625.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14267.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..869
                     /organism="Deinococcus sp. RL"
                     /db_xref="taxon:1489678"
     Protein         1..869
                     /product="DUF4357 domain-containing protein"
                     /calculated_mol_wt=92670
     Region          <47..574
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          57..106
                     /region_name="DUF4357"
                     /note="Domain of unknown function (DUF4357); pfam14267"
                     /db_xref="CDD:433823"
     Region          <374..820
                     /region_name="McrB"
                     /note="5-methylcytosine-specific restriction endonuclease
                     McrBC, GTP-binding regulatory subunit McrB [Defense
                     mechanisms]; COG1401"
                     /db_xref="CDD:441011"
     Region          <549..638
                     /region_name="COG4127"
                     /note="Predicted restriction endonuclease, Mrr-cat
                     superfamily [General function prediction only]"
                     /db_xref="CDD:443303"
ORIGIN      
        1 mttppgpspl feltssgvqa rgqerdggwv vlagstarrd vtesfersaa pgyrsrrqel
       61 iedgtlqlta dgaayeftrd atfrssteaa nvitgrpadg srswvttlpd rsqqthgewl
      121 aaqrgaqafp fsrfaadaaq ytedrvkgnl vldrryappl leamtgdwda leptrspysg
      181 reqlavkvgl gggvktdgga farallfadg sgfeyvpfpa gltleaglpd gagdgprtal
      241 rdagtwgall salnaplpag lgatltlnrd fgplallplg pgqeqeaaqv leryrdglgl
      301 srrlrvgvsl ppallespdf pqvlegalay ldrllgvlnd lmqaggaepe peviavpgte
      361 gprpatftpv pgiplnqily gppgtgktyr vvdealavld paflaahpgp agraarkrry
      421 dellaggqis fvtfhqsfgy edfiegikpv mrggqlfyel qdgvfleavr saggdlppag
      481 ggeapasaep pvrpdaqvwr myvdgtapvs rvrdlalarg elrmgsfgea prdlthrdad
      541 elggrqllfr dslrvgdlvl latgadriga vgvvtgeyrf dphgdpafat dyaharavrw
      601 latglsasas avlgrtfspp tlqrvagvna agvlaalgva ahpaapptpa qrphvlvide
      661 inrgnisrif gelitlless kragapeals atlplsrrtl sippslyvig tmntadrslt
      721 lldaalrrrf vfrpvwpqpe llpvldiggt aldlrkflya ingrierllg reqvighayl
      781 lglpatlggv asavrerilp lleeyffddw skirevlade gkpeeaqfvq rtgsgaevry
      841 rvneqafghl daftgvyagv sdrefpfdg
//
LOCUS       WP_235204228             175 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1800 family protein [Deinococcus sp. RL].
ACCESSION   WP_235204228
VERSION     WP_235204228.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus sp. RL
  ORGANISM  Deinococcus sp. RL
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020390.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08811.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Deinococcus sp. RL"
                     /db_xref="taxon:1489678"
     Protein         1..175
                     /product="DUF1800 family protein"
                     /calculated_mol_wt=19485
     Region          5..>174
                     /region_name="DUF1800"
                     /note="Protein of unknown function (DUF1800); cl22733"
                     /db_xref="CDD:473972"
ORIGIN      
        1 mslkplsrpl tpedaahllk rtafgatdaq iraltgrdar evarellafd qslapgnpfr
       61 paeaatpaag iqltraawlf ellygphplr ellaltwsnh fvigtdkvrn vpmlteylal
      121 lrrhaattdf trftlevaqs pamlryldnd qnrrgrpnen fsrellelft tgigh
//
LOCUS       WP_235204269             449 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing phosphohydrolase [Deinococcus sp. RL].
ACCESSION   WP_235204269
VERSION     WP_235204269.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus sp. RL
  ORGANISM  Deinococcus sp. RL
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
REFERENCE   1  (residues 1 to 449)
  AUTHORS   Galperin,M.Y. and Chou,S.H.
  TITLE     Sequence Conservation, Domain Architectures, and Phylogenetic
            Distribution of the HD-GYP Type c-di-GMP Phosphodiesterases
  JOURNAL   J Bacteriol 204 (4), e0056121 (2022)
   PUBMED   34928179
REFERENCE   2  (residues 1 to 449)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024878.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13487.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Deinococcus sp. RL"
                     /db_xref="taxon:1489678"
     Protein         1..449
                     /product="HD domain-containing phosphohydrolase"
                     /calculated_mol_wt=48020
     Region          124..246
                     /region_name="GAF_2"
                     /note="GAF domain; pfam13185"
                     /db_xref="CDD:433019"
     Region          <252..438
                     /region_name="HDGYP"
                     /note="HD-GYP domain, c-di-GMP phosphodiesterase class II
                     (or its inactivated variant) [Signal transduction
                     mechanisms]; COG2206"
                     /db_xref="CDD:441808"
ORIGIN      
        1 mkgqrwagmw glavggggll waastgqttl magltvalsa ltwplggrwr wvpllgfvat
       61 fllsavwgag lslagllgal llvgglgalg lrdsaltgev tglrqvaaal qggsgrlvea
      121 nraedivrag valvaelgfa phlayvgyvr glpqvlgarg afaeyvhrpi fpagdshsvq
      181 adhaladevl allppearge hlsvpvmggg hdlgllvlsr pgvpfsader glvescaclm
      241 gaqlgqweai celrdandlt lrslgaaler rddetgghtm rvvsasvrla qalgwdeerv
      301 aalrrgaylh dlgklaipdr vlhkrgpldt eerriieshs vigynllqdl hflpaetldl
      361 vrhhherwdg sgyparlrgh dipeaarlfa vvdvydalts arpykpawpr aqalqelraq
      421 agrqldphyv aafirmleae eqddvrlvs
//
LOCUS       WP_235204271             360 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing phosphohydrolase [Deinococcus sp. RL].
ACCESSION   WP_235204271
VERSION     WP_235204271.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus sp. RL
  ORGANISM  Deinococcus sp. RL
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
REFERENCE   1  (residues 1 to 360)
  AUTHORS   Galperin,M.Y. and Chou,S.H.
  TITLE     Sequence Conservation, Domain Architectures, and Phylogenetic
            Distribution of the HD-GYP Type c-di-GMP Phosphodiesterases
  JOURNAL   J Bacteriol 204 (4), e0056121 (2022)
   PUBMED   34928179
REFERENCE   2  (residues 1 to 360)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024878.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13487.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Deinococcus sp. RL"
                     /db_xref="taxon:1489678"
     Protein         1..360
                     /product="HD domain-containing phosphohydrolase"
                     /calculated_mol_wt=39145
     Region          31..152
                     /region_name="GAF"
                     /note="GAF domain; pfam01590"
                     /db_xref="CDD:460259"
     Region          <185..350
                     /region_name="HDGYP"
                     /note="HD-GYP domain, c-di-GMP phosphodiesterase class II
                     (or its inactivated variant) [Signal transduction
                     mechanisms]; COG2206"
                     /db_xref="CDD:441808"
ORIGIN      
        1 msaddraalg illdlsqall saqvrsevea iltrqsvrll gtryalflry lpeldvlrvt
       61 aqagqhaddl grtlprgqga swraalgpdp vlhlrrehlp pwamrragvp pqhvlyaplr
      121 sssgrllgvl tvgredppfl rrdehllatf antgtvtlqr iheaaraaat regallalgl
      181 aleardyetq ghtgrtvals erlgralgle egerehlrqg aylhdigkls vpdgillkpg
      241 pltpderalm qkhvlmgeal vrripgmppe vlgvvrshhe rwdgagypdg rageaiprla
      301 rlfsvvdvfd althvrpyra plsapaaldl lraeagrqfd pevvsafvsl pllgpgsrrv
//
LOCUS       WP_235204294             549 aa            linear   BCT 02-MAR-2025
DEFINITION  rhodanese-like domain-containing protein [Bordetella
            bronchiseptica].
ACCESSION   WP_235204294
VERSION     WP_235204294.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
REFERENCE   1  (residues 1 to 549)
  AUTHORS   Gliubich,F., Gazerro,M., Zanotti,G., Delbono,S., Bombieri,G. and
            Berni,R.
  TITLE     Active site structural features for chemically modified forms of
            rhodanese
  JOURNAL   J Biol Chem 271 (35), 21054-21061 (1996)
   PUBMED   8702871
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00581.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..549
                     /product="rhodanese-like domain-containing protein"
                     /calculated_mol_wt=58484
     Region          5..102
                     /region_name="PspE"
                     /note="Rhodanese-related sulfurtransferase [Inorganic ion
                     transport and metabolism]; COG0607"
                     /db_xref="CDD:440372"
     Region          118..224
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            189
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238791"
     Region          262..360
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            327
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238792"
     Region          390..485
                     /region_name="PspE"
                     /note="Rhodanese-related sulfurtransferase [Inorganic ion
                     transport and metabolism]; COG0607"
                     /db_xref="CDD:440372"
     Region          <459..>513
                     /region_name="SseA"
                     /note="3-mercaptopyruvate sulfurtransferase SseA, contains
                     two rhodanese domains [Inorganic ion transport and
                     metabolism]; COG2897"
                     /db_xref="CDD:442142"
ORIGIN      
        1 melstvselr dlratsdeya lfdvresaqa hqghifgatf lprrmlaari aslvprrstp
       61 ivlydeggpd prarlaaqtl arfgytgvrv ldgglrtwla qgeapcrgsn vpskwfgetv
      121 hahaatpalp iaalqawret gsahricdir speeygrari pgaagafgsd lawhaddlrr
      181 agqpvvvhcs grtrsiiace slrllgvqda yalengtmgw rlaglalerg pgsgslaasa
      241 asrrdgarrt qalaraagva sveaamlarw lderdagrtn lyvldirqva eyraghlpga
      301 ialpgglavq rtdeflpvra aqvvlvddde araalagywl ramglprvav lagglpawna
      361 agyalghgrg rprptdhada maarpcpahd vheagarmqr vyvdtqarfl agrpdaaewv
      421 pfggleawla arakrqdera vvlmahdesl arsaalnarl agfdaavlag gvtawqaqgl
      481 plasgpgggv aqaadvvvqp ydaglqamrd yleweqaltr qaiptlplyt ayrvprppaa
      541 dmeqdqeap
//
LOCUS       WP_235204289             173 aa            linear   BCT 02-MAR-2025
DEFINITION  Mov34/MPN/PAD-1 family protein [Bordetella bronchiseptica].
ACCESSION   WP_235204289
VERSION     WP_235204289.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
REFERENCE   1  (residues 1 to 173)
  AUTHORS   Iyer,L.M., Zhang,D., Rogozin,I.B. and Aravind,L.
  TITLE     Evolution of the deaminase fold and multiple origins of eukaryotic
            editing and mutagenic nucleic acid deaminases from bacterial toxin
            systems
  JOURNAL   Nucleic Acids Res 39 (22), 9473-9497 (2011)
   PUBMED   21890906
REFERENCE   2  (residues 1 to 173)
  AUTHORS   Iyer,L.M., Burroughs,A.M. and Aravind,L.
  TITLE     The prokaryotic antecedents of the ubiquitin-signaling system and
            the early evolution of ubiquitin-like beta-grasp domains
  JOURNAL   Genome Biol 7 (7), R60 (2006)
   PUBMED   16859499
REFERENCE   3  (residues 1 to 173)
  AUTHORS   Burns,K.E., Baumgart,S., Dorrestein,P.C., Zhai,H., McLafferty,F.W.
            and Begley,T.P.
  TITLE     Reconstitution of a new cysteine biosynthetic pathway in
            Mycobacterium tuberculosis
  JOURNAL   J Am Chem Soc 127 (33), 11602-11603 (2005)
   PUBMED   16104727
REFERENCE   4  (residues 1 to 173)
  AUTHORS   Verma,R., Aravind,L., Oania,R., McDonald,W.H., Yates,J.R. 3rd,
            Koonin,E.V. and Deshaies,R.J.
  TITLE     Role of Rpn11 metalloprotease in deubiquitination and degradation
            by the 26S proteasome
  JOURNAL   Science 298 (5593), 611-615 (2002)
   PUBMED   12183636
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025819.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14464.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..173
                     /product="Mov34/MPN/PAD-1 family protein"
                     /calculated_mol_wt=19026
     Region          38..144
                     /region_name="MPN"
                     /note="Mpr1p, Pad1p N-terminal (MPN) domains; cl13996"
                     /db_xref="CDD:472685"
ORIGIN      
        1 mirlftkamp khsivghlad tsqtlsierl alqhvsrhrq stpwateagg qlfgtlnaaq
       61 vcvteasgpy agdersryry rsnpaaaqra iedrhkrgll ylgewhthae dypsasgldd
      121 damrrliass qlnsnallmm ivgrarsaag ltvwsvsska arrwilsenp eet
//
LOCUS       WP_235204325             102 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2514 family protein [Bordetella bronchiseptica].
ACCESSION   WP_235204325
VERSION     WP_235204325.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022181.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10721.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..102
                     /product="DUF2514 family protein"
                     /calculated_mol_wt=10384
     Region          <2..98
                     /region_name="DUF2514"
                     /note="Protein of unknown function (DUF2514); pfam10721"
                     /db_xref="CDD:431455"
ORIGIN      
        1 mekarddaqe laaaaaanav garaerdrlr thanalaraa vardpdaadg sptgasavdl
       61 laymlsrvsg raealagvad rariagltce rayeavrgnv rp
//
LOCUS       WP_235204366             285 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Nocardia otitidiscaviarum].
ACCESSION   WP_235204366
VERSION     WP_235204366.1
KEYWORDS    RefSeq.
SOURCE      Nocardia otitidiscaviarum
  ORGANISM  Nocardia otitidiscaviarum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Nocardia otitidiscaviarum"
                     /db_xref="taxon:1823"
     Protein         1..285
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=30218
     Region          4..68
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(5..7,21,38..40)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133379"
     Region          86..>233
                     /region_name="MtbC1"
                     /note="Methanogenic corrinoid protein MtbC1 [Energy
                     production and conversion]; COG5012"
                     /db_xref="CDD:444036"
ORIGIN      
        1 mteytvgsva kllglpvatl rswnqryglg pqrhrpgrhr hyttedvavv trmvelvrag
       61 aspvsaaraa ktvlgpappl gdvapvvaaa ermdvsalls lvtahlahhg vvetwnrlcr
      121 pafgaiverq rrgdgyidve hvlswalttg lhhtvpaltg tarqrpivla caaaeqhvlp
      181 levlraalae rgrptlmlga avpadallda larragpavv vlwsqtseta rpesmpnadn
      241 pavdlvlagp gwagkefahg vrhvdsleaa lavldelspa drprr
//
LOCUS       WP_235204425             105 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF222 domain-containing protein [Nocardia].
ACCESSION   WP_235204425
VERSION     WP_235204425.1
KEYWORDS    RefSeq.
SOURCE      Nocardia
  ORGANISM  Nocardia
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae.
REFERENCE   1  (residues 1 to 105)
  AUTHORS   Davis,E.O., Dullaghan,E.M. and Rand,L.
  TITLE     Definition of the mycobacterial SOS box and use to identify
            LexA-regulated genes in Mycobacterium tuberculosis
  JOURNAL   J Bacteriol 184 (12), 3287-3295 (2002)
   PUBMED   12029045
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014741.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02720.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Nocardia"
                     /db_xref="taxon:1817"
     Protein         1..105
                     /product="DUF222 domain-containing protein"
                     /calculated_mol_wt=11578
ORIGIN      
        1 mtthstalap napapgwpdl advdllrtlv eterrrrrld aamraavaea errglaadtg
       61 yrdtvelltd llrisatear rrieyaapqv rsrsrkvwrv latag
//
LOCUS       WP_235204483             123 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4352 domain-containing protein [Nocardia otitidiscaviarum].
ACCESSION   WP_235204483
VERSION     WP_235204483.1
KEYWORDS    RefSeq.
SOURCE      Nocardia otitidiscaviarum
  ORGANISM  Nocardia otitidiscaviarum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023043.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11611.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Nocardia otitidiscaviarum"
                     /db_xref="taxon:1823"
     Protein         1..123
                     /product="DUF4352 domain-containing protein"
                     /calculated_mol_wt=13153
     Region          2..120
                     /region_name="DUF4352"
                     /note="Domain of unknown function (DUF4352); cl13117"
                     /db_xref="CDD:448816"
ORIGIN      
        1 mrdgqfefvi tnveqgttrv gggfwgeeak gefvlvsvdi snvgkraqty fgsnqvlidd
       61 qnrefeasfs anaalndygs hedlnpghkv svviafdvpv gvvpvaiefh dsmfsggakv
      121 avr
//
LOCUS       WP_235204488             339 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase domain-containing protein [Nocardia
            otitidiscaviarum].
ACCESSION   WP_235204488
VERSION     WP_235204488.1
KEYWORDS    RefSeq.
SOURCE      Nocardia otitidiscaviarum
  ORGANISM  Nocardia otitidiscaviarum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024880.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13489.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Nocardia otitidiscaviarum"
                     /db_xref="taxon:1823"
     Protein         1..339
                     /product="methyltransferase domain-containing protein"
                     /calculated_mol_wt=36008
     Region          <92..178
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Region          185..336
                     /region_name="NADB_Rossmann"
                     /note="Rossmann-fold NAD(P)(+)-binding proteins; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mpaaddfpml aatpeadesg hplamdlcaa cglaqlaedd thtaeprgve plalreqaad
       61 alarvaaagw lggrtvrefg sphggswlpm laergftetd gpadlvidcf gimhepdqlm
      121 afaqraaata pngvlllqfh slrtiveqgq wnalrhghfa yysltalrrl ldaagmsvat
      181 awefdlyggt ilvaavhapi tpdesvaail atesalgdad avrhlqrdad rqahalrvwl
      241 ereharghrv yaygaasrai sllhlagvhr gllaavadas pakqgrrmsg tdvpiiapae
      301 lvaaqpdqvl ltvadllpev atlwpeldgk wvvdipkpq
//
LOCUS       WP_235204501            1085 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Nocardia
            otitidiscaviarum].
ACCESSION   WP_235204501
VERSION     WP_235204501.1
KEYWORDS    RefSeq.
SOURCE      Nocardia otitidiscaviarum
  ORGANISM  Nocardia otitidiscaviarum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Nocardia otitidiscaviarum"
                     /db_xref="taxon:1823"
     Protein         1..1085
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=112172
     Region          13..1078
                     /region_name="reg_ATPase_IniR"
                     /note="isoniazid response ATPase/transcriptional regulator
                     IniR; NF038181"
                     /db_xref="CDD:468399"
ORIGIN      
        1 magnipiald slpytrdlfr eldsedsvpl lylvrgrsgt gkstllsair nrlrtrgtip
       61 tdnpydgqgg gspvttthpg sgrvartalv vddahtlpda afealcaaae sghrtvviat
      121 rprphdarlr altdlvsrrg rvvdlralav aeiapfarel gmmvprgiaq hihrqtggih
      181 ggvvaalaaa catrldagmg avdsavtswa rarlddadpe lldtlvvaai gagldasela
      241 evlevnlgaa qdlvdraras alitdadlll apavtplrtl vgdrrflgvq rrllrarlda
      301 gllrdhtall laesgvrdpr laeflcaaae kagdeatryy aavaaagadp ntiavrwada
      361 aaragdcdta lrlaepalar ddiapaelaa avricagvwt rrglisraaq lytwlgpqri
      421 gadwavgatv lylagdpava ralsasadrw ppteataraa tiatalatsv epgprtpraa
      481 trppreshga papgaspaad hpessvspva aphsetsapp gaatppaahr hddstrrhfd
      541 ggspsaatvs gaapvrthst tperpglaea ppgsaatrsf ldagttttpe rgaaasetar
      601 tagpfttapp stppavagwp gstgdgsrpg atgdgsqpga tgdssrpvtt ggsrtgttdg
      661 agqgssaggt vaapvrptgt pgyartepad ttasetaalg fphvhadarr gatmaaasal
      721 ihaahsglap seaggdrflp csavsiatll clsigeprra adalrgastd pqrrvlaawv
      781 amlggderaa aeavdqldia aldprdrlla havivglarr ggdhsaltla wqaaaplfde
      841 vgadlltllp igelwlagir lrdesrvsal vddarrllrr lgdppawans fhwyaiqaai
      901 aherpdrllp hahrlkaaae agdtqaaala dagrtwvlvl rgqvervpve aavrrlaglg
      961 lswdaarlas eaaltaddsg tatallklar tvrvqsrppe qpirplptpa prpdpvpdav
     1021 lsererevae lvllgltyre igarlyisak tvehhvarir rrigagsrse llsmlramgh
     1081 gsllv
//
LOCUS       WP_235204523             344 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Nocardia otitidiscaviarum].
ACCESSION   WP_235204523
VERSION     WP_235204523.1
KEYWORDS    RefSeq.
SOURCE      Nocardia otitidiscaviarum
  ORGANISM  Nocardia otitidiscaviarum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12697.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Nocardia otitidiscaviarum"
                     /db_xref="taxon:1823"
     Protein         1..344
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=37399
     Region          <3..326
                     /region_name="PhaC"
                     /note="Poly-beta-hydroxybutyrate synthase [Lipid transport
                     and metabolism]; COG3243"
                     /db_xref="CDD:442475"
ORIGIN      
        1 msladtvtta arnawaltfg agieapeptp stvlddrphr llhrydgata dapavllvpp
       61 laapafcfdl rpdqslvrfl ldsgrapylv dygdigyadr dmgfetwidd ilpeairrvs
      121 adrggrpvdl vgwsiggvle lltaaadptl pirsvtavga plsydhmvgm pqlrqlvkvt
      181 gdraavaavh lvggvpaplt riayrvtawe revkrpwfia rnltdtatla rmetidrfqn
      241 alpgyparfy nqlwkrfmma ndigkgvvrl gerrieladv tvpvllvggp ddaitaaaav
      301 rhgtetltgs pevryetapg shlgillard ttwtyldkfl rdlp
//
LOCUS       WP_235204529             368 aa            linear   BCT 02-MAR-2025
DEFINITION  GAF domain-containing protein [Nocardia otitidiscaviarum].
ACCESSION   WP_235204529
VERSION     WP_235204529.1
KEYWORDS    RefSeq.
SOURCE      Nocardia otitidiscaviarum
  ORGANISM  Nocardia otitidiscaviarum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 368)
  AUTHORS   Abendroth,J., Frando,A., Phan,I.Q., Staker,B.L., Myler,P.J.,
            Edwards,T.E. and Grundner,C.
  TITLE     Mycobacterium tuberculosis Rv3651 is a triple sensor-domain protein
  JOURNAL   Protein Sci 27 (2), 568-572 (2018)
   PUBMED   29119630
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037166.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18007.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Nocardia otitidiscaviarum"
                     /db_xref="taxon:1823"
     Protein         1..368
                     /product="GAF domain-containing protein"
                     /calculated_mol_wt=40624
     Region          2..102
                     /region_name="DUF5593"
                     /note="Domain of unknown function (DUF5593); pfam18007"
                     /db_xref="CDD:465615"
ORIGIN      
        1 metltpdtms vatvggeqra fanvrrvlqr vltrtpavyd sittrgiidv vrtvrgqarq
       61 tdlevptaag qhlvrarpvl gptggvhavq lwigpagavt ppppavgavw dldsqtvhqp
      121 gamttlrgvs adehvptmsv aelfhraaaf drhgevldll ydpgpedklq fdvdigplag
      181 rsagplgrwr vaarprdrga wlliedireq ptppawptle qvglreahrr agthlavvql
      241 ehtsishwlt dpapwvrwef lyrpvdvfhp ddrdrlaavr dnilagesae vtvctlgysg
      301 nylptrlrly pypgysrsql vigelrladd hcespssrag pcripeplgy deqlrrhisr
      361 rdrfdras
//
LOCUS       WP_235204737             310 aa            linear   BCT 02-MAR-2025
DEFINITION  enoyl-CoA hydratase-related protein [Bordetella bronchiseptica].
ACCESSION   WP_235204737
VERSION     WP_235204737.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012596.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00378.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..310
                     /product="enoyl-CoA hydratase-related protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=31757
     Region          4..>186
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     Site            order(21,23,56,60..64,99,101..103,125..126,129)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(62,103)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(83,91,112..115,127..130,136,138..140,142..143,
                     148..149,151..152,154..155,158,169,172,187)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
ORIGIN      
        1 msvaiamrgd igvvtldspp vnalgrtlrh glaqcleqac arpdvralll vsarpgifsa
       61 gadikefdqa gsdqdaglae lidrienapl pvvalldgaa lggalelalg chyrlvspra
      121 slglpeiklg llpgaggtqr lprlvgarha vemvlggepv ggetalrykl adallsaddt
      181 leqalawmrn apgglaprrv aslpalapas iaeaareaai rpvgsaaare aalaclaagr
      241 stpggrwsas rsracatgpr rgpcampflp sgrarqpamr rpgassrsrs wgparwapal
      301 ssawptpacr
//
LOCUS       WP_235204760             418 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase 87 family protein [Amycolatopsis mediterranei].
ACCESSION   WP_235204760
VERSION     WP_235204760.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis mediterranei
  ORGANISM  Amycolatopsis mediterranei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
REFERENCE   1  (residues 1 to 418)
  AUTHORS   Birch,H.L., Alderwick,L.J., Bhatt,A., Rittmann,D., Krumbach,K.,
            Singh,A., Bai,Y., Lowary,T.L., Eggeling,L. and Besra,G.S.
  TITLE     Biosynthesis of mycobacterial arabinogalactan: identification of a
            novel alpha(1-->3) arabinofuranosyltransferase
  JOURNAL   Mol Microbiol 69 (5), 1191-1206 (2008)
   PUBMED   18627460
REFERENCE   2  (residues 1 to 418)
  AUTHORS   Morita,Y.S., Sena,C.B., Waller,R.F., Kurokawa,K., Sernee,M.F.,
            Nakatani,F., Haites,R.E., Billman-Jacobe,H., McConville,M.J.,
            Maeda,Y. and Kinoshita,T.
  TITLE     PimE is a polyprenol-phosphate-mannose-dependent
            mannosyltransferase that transfers the fifth mannose of
            phosphatidylinositol mannoside in mycobacteria
  JOURNAL   J Biol Chem 281 (35), 25143-25155 (2006)
   PUBMED   16803893
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021134.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09594.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Amycolatopsis mediterranei"
                     /db_xref="taxon:33910"
     Protein         1..418
                     /product="glycosyltransferase 87 family protein"
                     /GO_function="GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=44831
     Region          11..384
                     /region_name="PMT_2"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; cl21590"
                     /db_xref="CDD:473917"
ORIGIN      
        1 mtvsqfrlfa rvapwllval aagtavrigl svdqglaals dtriyhagvl awldgkdfyn
       61 ivlsseahpg tytyppfsll pfglvlgwyq lgafvftags vaalfhilvl vlarawpvlp
      121 hrpliaaagt vcavqlepli htfywgqvnv fllwlvaldc lhrnprwprg vlvgvaaaik
      181 ltplvfvlff llgrqvrpal vavagfaact glawaiaphe stfywtravw dparignval
      241 pgnqslrgfa arlvpppdam llwaalaata aalaavvivr frrdggdvpa wlataalgtl
      301 vspvswthhw vwfaplllvt avwagraprl avpalvvvga vavfapaelf paspgapwwt
      361 hllgesyvva gflmlvglav lprrllpsgq rvpdtpewwt dpgdrtraep vpagrdgt
//
LOCUS       WP_235204772              67 aa            linear   BCT 02-MAR-2025
DEFINITION  cellulose binding domain-containing protein [Amycolatopsis
            mediterranei].
ACCESSION   WP_235204772
VERSION     WP_235204772.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis mediterranei
  ORGANISM  Amycolatopsis mediterranei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
REFERENCE   1  (residues 1 to 67)
  AUTHORS   Xu,G.Y., Ong,E., Gilkes,N.R., Kilburn,D.G., Muhandiram,D.R.,
            Harris-Brandts,M., Carver,J.P., Kay,L.E. and Harvey,T.S.
  TITLE     Solution structure of a cellulose-binding domain from Cellulomonas
            fimi by nuclear magnetic resonance spectroscopy
  JOURNAL   Biochemistry 34 (21), 6993-7009 (1995)
   PUBMED   7766609
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012762.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00553.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Amycolatopsis mediterranei"
                     /db_xref="taxon:33910"
     Protein         1..67
                     /product="cellulose binding domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_function="GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=6672
     Region          <10..64
                     /region_name="CBM_2"
                     /note="Cellulose binding domain; cl21579"
                     /db_xref="CDD:451319"
ORIGIN      
        1 mtfswptarq rltggwngtw aqngttvtvs ssappaagvd vgftadysgp nilpsaftln
       61 gvlcaag
//
LOCUS       WP_235204788             316 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Amycolatopsis
            mediterranei].
ACCESSION   WP_235204788
VERSION     WP_235204788.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis mediterranei
  ORGANISM  Amycolatopsis mediterranei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
REFERENCE   1  (residues 1 to 316)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Amycolatopsis mediterranei"
                     /db_xref="taxon:33910"
     Protein         1..316
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=33670
     Region          14..295
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(18,20..21,23,45..47,66..68,108..110,135,139,
                     160..163)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(86,110,135,139)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 msgrvvadga tdtavvigsa gfigrrlsat ldlarvrtac ftrqsrflcd gelaapiaga
       61 gtvfylassi npalgeshpe laradhvlfs tlldrlrrrd npptvvltss ggtvydpafa
      121 ppyaetsplk psgaygraki aleeellsha gelpavilrm snvygpgqpt grgqgvlahw
      181 lsaaldsrpl rligdvtatr dyvyvddvvd vmrrlrgagp aqplilnigs gvrtslsgll
      241 dvvrsvvald lrvefqpsrl fdrqdvwldv geaervlgwr petslkegva atwrswlaga
      301 avtagvnelq tifeti
//
LOCUS       WP_235204803             475 aa            linear   BCT 02-MAR-2025
DEFINITION  CoA-binding protein [Bordetella bronchiseptica].
ACCESSION   WP_235204803
VERSION     WP_235204803.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024773.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13380.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..475
                     /product="CoA-binding protein"
                     /calculated_mol_wt=50424
     Region          20..>469
                     /region_name="PatZN"
                     /note="Acyl-CoA synthetase (NDP forming) [Energy
                     production and conversion]; COG1042"
                     /db_xref="CDD:440664"
ORIGIN      
        1 mksvtqltvn adhlqgaiga lfkartvavv gisadhaklg nvilrnvvkn gfagniygvc
       61 rapvepgvfe agyervrfvq afseieepvd valfavpadm vvtalasvpl grlrlavila
      121 sgftetgerg asletalrqy cletqlpvvg pncqgvvvpg vklqmtfspm ynqmlegkva
      181 ivsqsgamag ymannlmrrg vglccvvssg neavltaady ihaladkpec rvvlcyieqi
      241 kngrhfarsv qrlgpqqriv vvksgrstag vaaasshtga masddrvidg vfrqlgvvra
      301 rdsataidva malangrrmk ggavgilsva gglavelsdl leldgftvpp fdpdtlerlk
      361 akvpefgasr npidlsgail tqeslfeevl nlfararnld gfaiistfir npafahaivr
      421 myrstdkpvv vcwtstpeqt pesleiltrs gipiygdtgr valalrairg dtdis
//
LOCUS       WP_235204833             323 aa            linear   BCT 02-MAR-2025
DEFINITION  S24 family peptidase [Bordetella bronchiseptica].
ACCESSION   WP_235204833
VERSION     WP_235204833.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
REFERENCE   1  (residues 1 to 323)
  AUTHORS   Bell,C.E., Frescura,P., Hochschild,A. and Lewis,M.
  TITLE     Crystal structure of the lambda repressor C-terminal domain
            provides a model for cooperative operator binding
  JOURNAL   Cell 101 (7), 801-811 (2000)
   PUBMED   10892750
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012920.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00717.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..323
                     /product="S24 family peptidase"
                     /calculated_mol_wt=35296
     Region          10..75
                     /region_name="HTH_31"
                     /note="Helix-turn-helix domain; pfam13560"
                     /db_xref="CDD:433309"
     Site            order(15,19,44)
                     /site_type="other"
                     /note="non-specific DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238045"
     Site            order(18,43)
                     /site_type="active"
                     /note="salt bridge [active]"
                     /db_xref="CDD:238045"
     Site            order(25..26,37,40,44,46)
                     /site_type="other"
                     /note="sequence-specific DNA binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238045"
     Region          167..300
                     /region_name="COG2932"
                     /note="Phage repressor protein C, contains Cro/C1-type HTH
                     and peptisase s24 domains [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:442176"
ORIGIN      
        1 mnrptlndvl aanlarlmek tghkqaslak lsgvgqttis lylnparrqp sksgkvpsak
       61 fgevealaga lgvapwdllh peggepaasq lakpspaprs gglvdidaaa defpmriggv
      121 papwepggtt trqmerhsqg lrisqavnvg hvedsgysan dhefipipel dvrlaagklg
      181 ienyqeteig qillrrsfle sfkrpikrmr icygngpsme pvirhrnpml vdvhpvslde
      241 vqprfvyain rggkmivkcl erwkdgrwma istnpapehh pfplatddgg evriigtvlw
      301 spydlrngvd erllqgwhqa sgw
//
LOCUS       WP_235204807             892 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Bordetella bronchiseptica].
ACCESSION   WP_235204807
VERSION     WP_235204807.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..892
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..892
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=99647
     Region          <518..811
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mkatikraer fllvcyfdpn gietvidniq hlktysqfsi eifnlfgsts plsegrmvnl
       61 drydgiilhn tisynpvnle aidqrftpsl kdfdgvkvmf kqdeqyrsga iagfigsrrf
      121 dlilscmwpe erhkmypedq vgnaqfmqml tgyvtpklra rkvgaiardi disyrgslqp
      181 lcfgrlaydk rtigddviaa argkgltldi ssrwedrlmg ddwfnflars kvtlgvesga
      241 sifdfdgeve alcrrleadh erfsneheys ewvlkqlepy egnvyynqis prhfeagaar
      301 alqvmhdgry sdifkpwqhf iplnrdmsnf dqvceyvrde klrgeivdrv ydeiianpry
      361 smqgfvaevd erldqllldk prvsrpvyra apsadknall icahvpkidp rvvwvadhap
      421 agmrihvmgv dtnlaeatfk vkpggtlesv iprvdtarwr elflregmgg vglqamarlq
      481 mlcdrtpael atmlggppds arsadcawlc ayllrtnaal idsvlqargv daivvadfea
      541 lpagavlkea lgvpliydah efwptslgpd aqawevdtwh rfeqellqvv dagytvspgl
      601 aaymaqfygk pfeampncep laaaagvast vsdakagnvc tflfqgnfaa grglellikt
      661 wpattesahl llrgpdrpyk qkmidlarat glldrriffp davdeeqlvg eaakadvgvi
      721 pyepavsvnn kfcspnklsq ymaaqlpila nnlafvgavi aeadagkvvd fadsqalaqa
      781 vdalvadrqm rlecglragr yfrekyhwea vsagfyrave rciddagrkt ggrfemrppm
      841 evlpdatspa nvvaprgaka ylyrvwnklp yrvqdtlrps arallraarr rr
//
LOCUS       WP_235204906             109 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1493 family protein [Pectobacterium brasiliense].
ACCESSION   WP_235204906
VERSION     WP_235204906.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium brasiliense
  ORGANISM  Pectobacterium brasiliense
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019023.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07377.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Pectobacterium brasiliense"
                     /db_xref="taxon:180957"
     Protein         1..109
                     /product="DUF1493 family protein"
                     /calculated_mol_wt=13116
     Region          4..109
                     /region_name="DUF1493"
                     /note="Protein of unknown function (DUF1493); pfam07377"
                     /db_xref="CDD:399982"
ORIGIN      
        1 mnqrdienev iqylmerypi rkhwfksgir qvtkdwslqd dyqflpedah dflldifghf
       61 niehsnfdgr nyfeyeypiw qkkplskalk pltvgmiies akagkwlyd
//
LOCUS       WP_235204949             551 aa            linear   BCT 02-MAR-2025
DEFINITION  alginate lyase family protein [Pectobacterium brasiliense].
ACCESSION   WP_235204949
VERSION     WP_235204949.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium brasiliense
  ORGANISM  Pectobacterium brasiliense
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 551)
  AUTHORS   Yoon,H.J., Mikami,B., Hashimoto,W. and Murata,K.
  TITLE     Crystal structure of alginate lyase A1-III from Sphingomonas
            species A1 at 1.78 A resolution
  JOURNAL   J Mol Biol 290 (2), 505-514 (1999)
   PUBMED   10390348
REFERENCE   2  (residues 1 to 551)
  AUTHORS   Ertesvag,H., Erlien,F., Skjak-Braek,G., Rehm,B.H. and Valla,S.
  TITLE     Biochemical properties and substrate specificities of a
            recombinantly produced Azotobacter vinelandii alginate lyase
  JOURNAL   J Bacteriol 180 (15), 3779-3784 (1998)
   PUBMED   9683471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017263.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05426.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Pectobacterium brasiliense"
                     /db_xref="taxon:180957"
     Protein         1..551
                     /product="alginate lyase family protein"
                     /GO_component="GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /GO_function="GO:0016829 - lyase activity [Evidence IEA]"
                     /calculated_mol_wt=59705
     Region          71..310
                     /region_name="AlgLyase"
                     /note="Alginate Lyase A1-III; enzymatically depolymerizes
                     alginate, a complex copolymer of beta-D-mannuronate and
                     alpha-L-guluronate, by cleaving the beta-(1,4) glycosidic
                     bond; cl00179"
                     /db_xref="CDD:444729"
     Region          459..>526
                     /region_name="beta-trefoil_FSCN-like"
                     /note="fascin-like domain, beta-trefoil fold, found in the
                     fascin-like family; cl49611"
                     /db_xref="CDD:483951"
ORIGIN      
        1 mskkknaffl iiillglfls glrvghtaan dkaflhpgml ytqadlermk agvnnkqapw
       61 ytdwqllqsh ylasstysat pkavvyrndp tngnmgngel qnsasaalsl aiewavtknp
      121 ayanaaikil ngwsttltai kgndaqlaas lygykllnaa eilrytgsgw ssadiaqfsk
      181 mmtnvfyplt itygqvnggw angnwdaadt vfnlslgvwl ndseiynnav tyfkqgegng
      241 svihyvqndn gqlqesgrdq ahaqgglgll vmaaqigynq rqyhtsgadm vsypnnsypl
      301 vkaaeytaky nlgytvpytp ipgkgytlad mgkgrswipg ltissafrge frpiyrgifs
      361 lftaagvpet klpytkdvis rmpigkfyfd hpsyeglina teasssrpms ivlqsvskyr
      421 nqdntgtlat vtgestpiiv ngvnpsvnsg iqavylnqnr fafrsiqtgk yisatadgrl
      481 vasadnitds esfiytdsgn gngtllavsn krflimdpdt yqisatgtgv sndngrwvml
      541 ypdptalgvv k
//
LOCUS       WP_235204973             693 aa            linear   BCT 02-MAR-2025
DEFINITION  ankyrin repeat domain-containing protein [Pectobacterium
            brasiliense].
ACCESSION   WP_235204973
VERSION     WP_235204973.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium brasiliense
  ORGANISM  Pectobacterium brasiliense
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025021.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13637.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Pectobacterium brasiliense"
                     /db_xref="taxon:180957"
     Protein         1..693
                     /product="ankyrin repeat domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=78569
     Region          48..>166
                     /region_name="PHA03095"
                     /note="ankyrin-like protein; Provisional"
                     /db_xref="CDD:222980"
     Region          96..127
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          98..>578
                     /region_name="PHA02876"
                     /note="ankyrin repeat protein; Provisional"
                     /db_xref="CDD:165207"
     Region          129..168
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <453..646
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          509..552
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(553,555,559..560,563..565,567..568,572,575,584,586,
                     588,592,595..597,603..604,608,611,620,622,624,628..629,
                     632..634,636..637,641,644)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          553..584
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          586..620
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
ORIGIN      
        1 mvhkqflpvw gslkdammwg ilsrqqqslh diccsalple kkkrqidrfl aqggsinerq
       61 phnanvlgll tvstdapdte lvrylldkga fieqpggfsa lhnaieffhl dlaelylqyg
      121 advhylnffs nswlnylycp qdrhtytddq rkqmldlllr ygldlnreti fwtsletsfp
      181 ieivlcekdv sllehifqld vpihfaetgi ferifnykse wlplplfqqi vkraggaayr
      241 epgvilsedk kirtdgslle maifycader lceclldtyp dircdlsnys fvldtllnry
      301 slelveriiq ktadidrpys lfissgrkkq sgweadaypd vgssammqfv dnrlikalse
      361 pdyyayfydg mslllqygas plvdkmsggr syemrnwsll ylvcvemvsq nnfrpdlldl
      421 lvahganfnv kksavseplc itllqrgyns thedvllqvm nylyehgmdl qatnaylint
      481 aaaagigsrp qvlqwliarg vdihtlsgfd nspvlhktis lysdealtpe rraetvavll
      541 dnganidefs ideqftplmc aayygeakca evllarganp harsangmtp lrcalhrada
      601 aaarivtllh qygvtitrvd eegndllvrc irnkhdavfk alleilspsl ddmhrlldwl
      661 aqgnrycyfs dqlrqqiarl sagepsshhs lpr
//
LOCUS       WP_235204976             495 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: methyl-accepting chemotaxis protein [Pectobacterium].
ACCESSION   WP_235204976
VERSION     WP_235204976.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium
  ORGANISM  Pectobacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae.
REFERENCE   1  (residues 1 to 495)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Pectobacterium"
                     /db_xref="taxon:122277"
     Protein         1..495
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=53072
     Region          1..167
                     /region_name="chemoreceptor_sensor"
                     /note="4-helix bundle ligand binding sensor domain of
                     chemoreceptors such as Tar or Tsr; cl00144"
                     /db_xref="CDD:444710"
     Region          <161..495
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(282..283,286..287,290,293..294,296..297,300,
                     303..304,307,310..311,314..315,318,321..322,324..325,329,
                     331..332,335,338..339,342..343,346,349,352..353,356,360,
                     363,370,374,377,380..381,384,387..388,391..392,394..395,
                     398..399,412..413,416,419..420,423,426..427,429..430,
                     433..434,437,440..441,444,447..448,450..451,454..455,
                     457..458,461,464..465)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            352..385
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 mallllvvsl iglfgmnntn qsmktlyqdr lialgyldni trqvntvmfe vasvdlsqpg
       61 dvktglehia eaqkiydaqw dlysktyltg deklleeqfa mlykqyndkv vtpainaikk
      121 ndkdaleyii nhtlkseyap lqktadqlik lqsdvgqely sesqssfsni lffvvitlli
      181 giaivalsgw rlilsiavpi knavdlarkv adgdlthria itsndemgql qtalremvln
      241 ltdivervhs nadiiatass qinsgnidls srteqqassl eetaasmeqm tssvkqnath
      301 aahasqlatt asqravdggk mmgdvtnamq qmvssaekit niigvidgia fqtnilalna
      361 aveaarageq grgfavvage vrtlaqrsan aakeikelig tsveqanhgh havidagsmi
      421 qsvvedikrv asivteista sneqslgigq intaisqmet vtqqnaalvn eaaaaagsls
      481 eragelshav aafri
//
LOCUS       WP_235204985              38 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GTP-binding protein, partial [Alcaligenaceae].
ACCESSION   WP_235204985
VERSION     WP_235204985.1
KEYWORDS    RefSeq.
SOURCE      Alcaligenaceae
  ORGANISM  Alcaligenaceae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales.
REFERENCE   1  (residues 1 to 38)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..38
                     /organism="Alcaligenaceae"
                     /db_xref="taxon:506"
     Protein         1..>38
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>37
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 makgkfertk phvnvgtigh vdhgkttlta aittvlsn
//
LOCUS       WP_235204998              44 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: Com family DNA-binding transcriptional regulator
            [Pseudomonas syringae group].
ACCESSION   WP_235204998
VERSION     WP_235204998.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae group
  ORGANISM  Pseudomonas syringae group
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 44)
  AUTHORS   Morgan,G.J., Hatfull,G.F., Casjens,S. and Hendrix,R.W.
  TITLE     Bacteriophage Mu genome sequence: analysis and comparison with
            Mu-like prophages in Haemophilus, Neisseria and Deinococcus
  JOURNAL   J Mol Biol 317 (3), 337-359 (2002)
   PUBMED   11922669
REFERENCE   2  (residues 1 to 44)
  AUTHORS   Kahmann,R.
  TITLE     Methylation regulates the expression of a DNA-modification function
            encoded by bacteriophage Mu
  JOURNAL   Cold Spring Harb Symp Quant Biol 47 Pt 2, 639-646 (1983)
   PUBMED   6345072
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021626.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10122.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..44
                     /organism="Pseudomonas syringae group"
                     /db_xref="taxon:136849"
     Protein         1..44
                     /product="Com family DNA-binding transcriptional
                     regulator"
                     /calculated_mol_wt=4639
     Region          <1..>32
                     /region_name="Mu-like_Com"
                     /note="Mu-like prophage protein Com; cl11540"
                     /db_xref="CDD:472211"
ORIGIN      
        1 mgdytelqik csrcgtlnhv katshelspl sdvnaeptai nhst
//
LOCUS       WP_235204991             114 aa            linear   BCT 02-MAR-2025
DEFINITION  suppressor of fused domain protein [Pseudomonas syringae].
ACCESSION   WP_235204991
VERSION     WP_235204991.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 114)
  AUTHORS   Zhang,D., Iyer,L.M. and Aravind,L.
  TITLE     A novel immunity system for bacterial nucleic acid degrading toxins
            and its recruitment in various eukaryotic and DNA viral systems
  JOURNAL   Nucleic Acids Res 39 (11), 4532-4552 (2011)
   PUBMED   21306995
REFERENCE   2  (residues 1 to 114)
  AUTHORS   Rubin,J.B. and Rowitch,D.H.
  TITLE     Medulloblastoma: a problem of developmental biology
  JOURNAL   Cancer Cell 2 (1), 7-8 (2002)
   PUBMED   12150819
REFERENCE   3  (residues 1 to 114)
  AUTHORS   Taylor,M.D., Liu,L., Raffel,C., Hui,C.C., Mainprize,T.G., Zhang,X.,
            Agatep,R., Chiappa,S., Gao,L., Lowrance,A., Hao,A., Goldstein,A.M.,
            Stavrou,T., Scherer,S.W., Dura,W.T., Wainwright,B., Squire,J.A.,
            Rutka,J.T. and Hogg,D.
  TITLE     Mutations in SUFU predispose to medulloblastoma
  JOURNAL   Nat Genet 31 (3), 306-310 (2002)
   PUBMED   12068298
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016932.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05076.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         1..114
                     /product="suppressor of fused domain protein"
                     /calculated_mol_wt=13270
     Region          <7..66
                     /region_name="SUFU"
                     /note="Suppressor of fused protein (SUFU); pfam05076"
                     /db_xref="CDD:461543"
ORIGIN      
        1 magisipflw ndghfeellf adiqinwlqc faihetekdf iskygsdsfe sllteqeinv
       61 ldmerepvsl pyrysrrafa vksqalsiap yellphrars rrqswrpdsn ghrq
//
LOCUS       WP_235205021             813 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF637 domain-containing protein, partial [Pseudomonas syringae].
ACCESSION   WP_235205021
VERSION     WP_235205021.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04830.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         <1..813
                     /product="DUF637 domain-containing protein"
     Region          169..326
                     /region_name="DUF637"
                     /note="Possible hemagglutinin (DUF637); pfam04830"
                     /db_xref="CDD:428148"
     Region          <554..659
                     /region_name="PRK13875"
                     /note="conjugal transfer protein TrbL; Provisional"
                     /db_xref="CDD:237537"
     Region          679..790
                     /region_name="NUC"
                     /note="DNA/RNA non-specific endonuclease; prokaryotic and
                     eukaryotic double- and single-stranded DNA and RNA
                     endonucleases also present in phosphodiesterases. They
                     exists as monomers and homodimers; cl00089"
                     /db_xref="CDD:469610"
ORIGIN      
        1 tfegvkdlhq esheksdnnt fwvsskgkgn tdetlrqsel vaagevtika vnglqidikq
       61 vdqqtvtqsi damvkadpql awlkdaekrg dvdwrqvkei hdsfkysnsg lgpasqiiia
      121 iimaavvgpm amgavgtstg aavtagtmst gtatflsaga gaiaagaatn atvsvinnrg
      181 nlgavvkdvt ssdaikgyvi sgvtagltaa yfdgltgtht diasgkiigp elstltgvgq
      241 faanqilqng tsailskalg mggsgsdalk talfntlaaa sfnavgdytr gtfadgtppk
      301 iiihamvggl lskatggdfr tgalaagane alvvhlnglv ngnenlltms sqivgalaaa
      361 tqkdadassi ekgrwiakns tqynflndhd tkernsarea yekdqgidaa rklvsleksd
      421 qrsnnllday ktnpesltka dlselqaylq vyayeltknv gqeqaqarlt sllqsttpat
      481 qgfsyagtae aknaysdaar aeldgvfaql swsrtksaee qiyanakgtl lvnneqqgla
      541 niggpaiyal sgplgigirg iaaangaaqi gyglgqaldg dswnaagnmv fgslalvggl
      601 gttkalsggs gvrgaagtve agagakdaas gsvsgetglv gtgkaaanda ssvgakaipe
      661 snypslatps pnapsnvilg eldslgrptg vtavlredsl gggssanpai rppgfegqps
      721 nharghllan slggagddar nlvtlfqrna nhpnmssfer qvrgavqsge tvsyravpiy
      781 tgtnpmptgv tlsargsggf tldvsipnvs gvk
//
LOCUS       WP_235205070             406 aa            linear   BCT 02-MAR-2025
DEFINITION  Rieske 2Fe-2S domain-containing protein [Bordetella
            bronchiseptica].
ACCESSION   WP_235205070
VERSION     WP_235205070.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
REFERENCE   1  (residues 1 to 406)
  AUTHORS   Botelho,H.M., Leal,S.S., Veith,A., Prosinecki,V., Bauer,C.,
            Frohlich,R., Kletzin,A. and Gomes,C.M.
  TITLE     Role of a novel disulfide bridge within the all-beta fold of
            soluble Rieske proteins
  JOURNAL   J Biol Inorg Chem 15 (2), 271-281 (2010)
   PUBMED   19862563
REFERENCE   2  (residues 1 to 406)
  AUTHORS   Iwata,S., Saynovits,M., Link,T.A. and Michel,H.
  TITLE     Structure of a water soluble fragment of the 'Rieske' iron-sulfur
            protein of the bovine heart mitochondrial cytochrome bc1 complex
            determined by MAD phasing at 1.5 A resolution
  JOURNAL   Structure 4 (5), 567-579 (1996)
   PUBMED   8736555
REFERENCE   3  (residues 1 to 406)
  AUTHORS   Brandt,U., Yu,L., Yu,C.A. and Trumpower,B.L.
  TITLE     The mitochondrial targeting presequence of the Rieske iron-sulfur
            protein is processed in a single step after insertion into the
            cytochrome bc1 complex in mammals and retained as a subunit in the
            complex
  JOURNAL   J Biol Chem 268 (12), 8387-8390 (1993)
   PUBMED   8386158
REFERENCE   4  (residues 1 to 406)
  AUTHORS   Huang,J.T., Struck,F., Matzinger,D.F. and Levings,C.S. 3rd.
  TITLE     Functional analysis in yeast of cDNA coding for the mitochondrial
            Rieske iron-sulfur protein of higher plants
  JOURNAL   Proc Natl Acad Sci U S A 88 (23), 10716-10720 (1991)
   PUBMED   1961737
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012575.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00355.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..406
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /GO_function="GO:0051537 - 2 iron, 2 sulfur cluster
                     binding [Evidence IEA]"
                     /calculated_mol_wt=45838
     Region          1..356
                     /region_name="PobA"
                     /note="Chlorophyllide a oxygenase/letal leaf spot protein
                     [Coenzyme transport and metabolism]; COG5749"
                     /db_xref="CDD:444459"
     Region          1..118
                     /region_name="Rieske"
                     /note="Rieske domain; a [2Fe-2S] cluster binding domain
                     commonly found in Rieske non-heme iron oxygenase (RO)
                     systems such as naphthalene and biphenyl dioxygenases, as
                     well as in plant/cyanobacterial chloroplast b6f and
                     mitochondrial cytochrome bc(1) complexes; cl00938"
                     /db_xref="CDD:445190"
     Site            order(40,42..43,59,61..62,64,66)
                     /site_type="other"
                     /note="iron-sulfur cluster [ion binding]"
                     /db_xref="CDD:239550"
     Site            order(40,42..43,59,62,64)
                     /site_type="other"
                     /note="[2Fe-2S] cluster binding site [ion binding]"
                     /db_xref="CDD:239550"
ORIGIN      
        1 mlssqlpegs rapvrlrllg edliafrdgs gqvgithahc lhrgaplffg kveergircs
       61 yhgwlygrdg qclempsekn snlcqkmhlp ayqaqekagi vwiymgagpa pelprfpwid
      121 lpekqrlasv wvqetnwmqg aegeidsshv stlhksdqgv asdrvhrtyt ykdprpelnv
      181 eetpigfmsi arrraderfy wrvtqwmapm fsvipsaawp iggrawvpid dentycwdfn
      241 yvldgelpqa flefvergis fppeyrygpf elnggsiidt wapirnrrnd ylvnreaqkg
      301 tsttgihgvn dqdramqegm griadrtkek lvsadlaivm arrkvldfma spealqkfra
      361 lvrdgtvfsm apvdtvadtr eladflksls ypavpdaeam qeqvpq
//
LOCUS       WP_235205093             101 aa            linear   BCT 02-MAR-2025
DEFINITION  acetate--CoA ligase family protein, partial [Bordetella
            bronchiseptica].
ACCESSION   WP_235205093
VERSION     WP_235205093.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024938.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13549.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         <1..101
                     /product="acetate--CoA ligase family protein"
     Region          <25..101
                     /region_name="ATP-grasp_5"
                     /note="ATP-grasp domain; pfam13549"
                     /db_xref="CDD:463918"
ORIGIN      
        1 paesarsapp scgetahspg tlvypfdqah aeeclrklrv aalfdgvrge nplpvqelah
       61 aatrlgawlh aqqgavasvd inpliagpdg rlyaadalve i
//
LOCUS       WP_235204982             171 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: lipid II-degrading bacteriocin [Pectobacterium].
ACCESSION   WP_235204982
VERSION     WP_235204982.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium
  ORGANISM  Pectobacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae.
REFERENCE   1  (residues 1 to 171)
  AUTHORS   El Ghachi,M., Bouhss,A., Barreteau,H., Touze,T., Auger,G.,
            Blanot,D. and Mengin-Lecreulx,D.
  TITLE     Colicin M exerts its bacteriolytic effect via enzymatic degradation
            of undecaprenyl phosphate-linked peptidoglycan precursors
  JOURNAL   J Biol Chem 281 (32), 22761-22772 (2006)
   PUBMED   16777846
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026209.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14859.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Pectobacterium"
                     /db_xref="taxon:122277"
     Protein         1..171
                     /product="lipid II-degrading bacteriocin"
                     /GO_process="GO:0042742 - defense response to bacterium
                     [Evidence IEA]"
                     /calculated_mol_wt=18554
     Region          <21..171
                     /region_name="Colicin_M"
                     /note="Colicin M; pfam14859"
                     /db_xref="CDD:258996"
ORIGIN      
        1 maetglelfn dlkdslprsg eilsgvtapf eafdhylfgn gversinind vgfninvsqi
       61 ppimsllngk nvgrfdigsd fvrntaldgy svaaylgnit mrtegvlnvk sdgtwqyegv
      121 irsyndiyda npsthrgvlg ewatgvlsnf sgkpyeisip gelkiketgk k
//
LOCUS       WP_235205172             151 aa            linear   BCT 02-MAR-2025
DEFINITION  glutathione binding-like protein [Aeromonas taiwanensis].
ACCESSION   WP_235205172
VERSION     WP_235205172.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas taiwanensis
  ORGANISM  Aeromonas taiwanensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 151)
  AUTHORS   Dixon,D.P., Lapthorn,A. and Edwards,R.
  TITLE     Plant glutathione transferases
  JOURNAL   Genome Biol 3 (3), REVIEWS3004 (2002)
   PUBMED   11897031
REFERENCE   2  (residues 1 to 151)
  AUTHORS   Nishida,M., Harada,S., Noguchi,S., Satow,Y., Inoue,H. and
            Takahashi,K.
  TITLE     Three-dimensional structure of Escherichia coli glutathione
            S-transferase complexed with glutathione sulfonate: catalytic roles
            of Cys10 and His106
  JOURNAL   J Mol Biol 281 (1), 135-147 (1998)
   PUBMED   9680481
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012273.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00043.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Aeromonas taiwanensis"
                     /db_xref="taxon:633417"
     Protein         1..151
                     /product="glutathione binding-like protein"
                     /calculated_mol_wt=17416
     Region          <2..23
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
     Region          35..149
                     /region_name="GST_C_family"
                     /note="C-terminal, alpha helical domain of the Glutathione
                     S-transferase family; cl02776"
                     /db_xref="CDD:470672"
     Site            order(43,50,110,113..114,117,121)
                     /site_type="other"
                     /note="N-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:198291"
     Site            order(43..44,47..48,51,92)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:198291"
     Site            order(50,54..55,118,121)
                     /site_type="other"
                     /note="substrate binding pocket (H-site) [chemical
                     binding]"
                     /db_xref="CDD:198291"
ORIGIN      
        1 mpvlelddgt ylsetlaicr yfeelhpepn lfgrtalera tvemwsrfie fnlwlptgma
       61 frhitgfykd retvfpewge eckqqaltwf akldarlaeh pyvagerfti adilalcsid
      121 fgkvvdiria peqrhlqawh drvssrpsaq a
//
LOCUS       WP_235205223             154 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3310 domain-containing protein [Staphylococcus haemolyticus].
ACCESSION   WP_235205223
VERSION     WP_235205223.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus haemolyticus
  ORGANISM  Staphylococcus haemolyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023181.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11753.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Staphylococcus haemolyticus"
                     /db_xref="taxon:1283"
     Protein         1..154
                     /product="DUF3310 domain-containing protein"
                     /calculated_mol_wt=17836
     Region          86..142
                     /region_name="DUF3310"
                     /note="Protein of unknwon function (DUF3310); pfam11753"
                     /db_xref="CDD:432050"
ORIGIN      
        1 menvriidlk kddivqfqay lkkvkamqta ivnrvyaeef mlktiwkaev enqagykfti
       61 tdnddfmkvn epftrkvdmk egqdmvnepp hyqfgkfsar viielvgkty ksasvfyhvg
      121 nalkylmrap rknglqdlkk akqsvefaie nweg
//
LOCUS       WP_235205258             626 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Oleiagrimonas soli].
ACCESSION   WP_235205258
VERSION     WP_235205258.1
KEYWORDS    RefSeq.
SOURCE      Oleiagrimonas soli
  ORGANISM  Oleiagrimonas soli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Rhodanobacteraceae; Oleiagrimonas.
REFERENCE   1  (residues 1 to 626)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Oleiagrimonas soli"
                     /db_xref="taxon:1543381"
     Protein         1..626
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=70049
     Region          68..404
                     /region_name="GH43-like"
                     /note="Glycosyl hydrolase family 43 protein;
                     uncharacterized; cd08982"
                     /db_xref="CDD:350096"
     Region          400..512
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
     Region          549..621
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(615..616,618..619)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
ORIGIN      
        1 mssrmlvths faplckrlhp llavlllvlt vpqarasadh easarptyan pvdvdyryny
       61 eqmnegisyr tgadpavvyf kgvyylfqtl adgywrstdl ahwtfvkpdk wpfdsevapa
      121 tlvadgklfl mratmrpepl lystdpksgh wdfwsrwlpm vpkttwpgkp ilpgrlpsgp
      181 wdpglfqddd gkvylywgss nvhplygiem nlaldkaaeg egkritypge pvtliklhpd
      241 ehgwerfgrd hsdttiapfi egawmnkhgg ryylqyaapg teynvyatgv ytsdkplgpf
      301 hyapynpigy kpggftqgag hgstfqgahg nwwntgtswi gtnwtferri glypagftad
      361 gqmwvntrfg dfphyvpdhk lqpgestftg wmllsyrkha tassqiadhg palatdenpr
      421 tfwvaaknap gqtltvdlgg prtvravqvn yadykagryg dapdivtrfr llgsvdgthw
      481 htladlsksq rgradaylpl kraqtlryir yvhihvgskh laiadlrvfg neagpppspp
      541 vlvsakrlvd arvaqitwkp vpgavgynlr wglardrlfe tyqrfadqpt tlkltslnkg
      601 vryvvaveaf dergvsrlsk tmvlkp
//
LOCUS       WP_235205275             431 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramoyl-L-alanine amidase [Oleiagrimonas soli].
ACCESSION   WP_235205275
VERSION     WP_235205275.1
KEYWORDS    RefSeq.
SOURCE      Oleiagrimonas soli
  ORGANISM  Oleiagrimonas soli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Rhodanobacteraceae; Oleiagrimonas.
REFERENCE   1  (residues 1 to 431)
  AUTHORS   Kuroda,A., Sugimoto,Y., Funahashi,T. and Sekiguchi,J.
  TITLE     Genetic structure, isolation and characterization of a Bacillus
            licheniformis cell wall hydrolase
  JOURNAL   Mol Gen Genet 234 (1), 129-137 (1992)
   PUBMED   1495475
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013670.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01520.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Oleiagrimonas soli"
                     /db_xref="taxon:1543381"
     Protein         1..431
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /EC_number="3.5.1.28"
                     /GO_function="GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=46329
     Region          6..99
                     /region_name="AMIN"
                     /note="AMIN domain; pfam11741"
                     /db_xref="CDD:463338"
     Region          97..341
                     /region_name="AmiC"
                     /note="N-acetylmuramoyl-L-alanine amidase [Cell
                     wall/membrane/envelope biogenesis]; COG0860"
                     /db_xref="CDD:440621"
     Region          <387..431
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
ORIGIN      
        1 mrmstsdqht ravfelsssl dyklfqlknp drvvldfdda rlasgfqspg angllkdvrt
       61 gkhgkhgvrv vldmkagvqv ksflldpagg nshrlvldly pssdagraiv rrtapvgerk
      121 vliaidpghg gkdsgahgrg gleektvtla iakrlaalvn kqpgmkailt rdddtyiple
      181 rrfeiarqhk admfvsihan scpnhcsarg asvwvlsthg keseagkwla rsenasdlig
      241 vsldnrshtl asvlldlsqg asmqaskqvg hdvlgalkgi iplykpsvqh anfvvlrspd
      301 vpsilvetaf isnrhderll rsssyrqkma dailkgldry ftttppqgtw faaqwakkhg
      361 mqiasttdat asvdapsrad anvqdlhkvs sgetlsgiah qygvsmdaik nannldgnmv
      421 ragsmlaipa g
//
LOCUS       WP_235205290             739 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5916 domain-containing protein [Oleiagrimonas soli].
ACCESSION   WP_235205290
VERSION     WP_235205290.1
KEYWORDS    RefSeq.
SOURCE      Oleiagrimonas soli
  ORGANISM  Oleiagrimonas soli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Rhodanobacteraceae; Oleiagrimonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039587.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19313.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Oleiagrimonas soli"
                     /db_xref="taxon:1543381"
     Protein         1..739
                     /product="DUF5916 domain-containing protein"
                     /calculated_mol_wt=82653
     Region          19..189
                     /region_name="DOMON_like"
                     /note="Domon-like ligand-binding domains; cl14783"
                     /db_xref="CDD:472705"
     Site            order(95,116,176)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:187675"
     Region          215..>310
                     /region_name="DUF5916"
                     /note="Domain of unknown function (DUF5916); pfam19313"
                     /db_xref="CDD:466036"
ORIGIN      
        1 mllllalsla afsacaqvti dghitpgewa garhitdfrd vqplsgkpgs lpteawvmst
       61 pkglavafrl aqpagvtrth qrtrrdeeal vdrvnvmvdf dgdgrtgydf tvalsgsvid
      121 evitnessfn kdwdgdwkha vsedaqgwsv eilipwyiap mrrahggkrt iglyldrvvg
      181 stgermawpt asfmrarfls dfrkvtlpsy tqsllavtpy vsavhdqvhg gssfktgadl
      241 fwkpngqtql tatvnpdfgq vesddlvvnf gaeetffsdk rpfftenqgi fdfgllidns
      301 qliytrrvgg paddgsgpad itgalklngs igdtnygvls aqesgaagrt fdavrvshhf
      361 qtqtlgallt rvdhpfldrd atvlgidhiw qpnakltvts nvvgdtiqqr gttlhgsggs
      421 tiiqyemnpr wtqqwiamhf gktldindfg ylprnnlnyv hwevrrrftd lpadstyash
      481 ewrwriigmn ndqgltlqrq frvisrnerr dggtdylqln ldasghddll trgnhalrth
      541 anatlfaert lprrgawgwd lsanvsgndl tglkrigyei evlptyyfsd alsftpgvsy
      601 tyqpnwliwq rdnlvgsfdg rtleldaaln wnlserqelr vrlqalglna rmrqayqvga
      661 dmrahpdatp iddfslrnlg fqiryryqla plsnlyivyg rggyalepll tstgtqfrqs
      721 fnlrdseqfl vkvayrfel
//
LOCUS       WP_235205294             319 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Oleiagrimonas
            soli].
ACCESSION   WP_235205294
VERSION     WP_235205294.1
KEYWORDS    RefSeq.
SOURCE      Oleiagrimonas soli
  ORGANISM  Oleiagrimonas soli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Rhodanobacteraceae; Oleiagrimonas.
REFERENCE   1  (residues 1 to 319)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Oleiagrimonas soli"
                     /db_xref="taxon:1543381"
     Protein         1..319
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=34683
     Region          10..307
                     /region_name="PRK14997"
                     /note="LysR family transcriptional regulator; Provisional"
                     /db_xref="CDD:184959"
ORIGIN      
        1 menrdgalhd lndlyffaav vehggfsaag ralgvpksrl skrvsqleer lgvrllqrtt
       61 rrfvvtevge rfhahcravl eeaqaaqdai delrseprgv vrvtcpisls qtvmaqllpe
      121 fmeqhpkvqv rlistdrrvd ligegidiav rvrakldada tlvmrsfges rllavasptl
      181 ldrlgrpkaa mdlsklpals pyehdapqvw sltdghgasv dvpmqarlvt gefsvllaaa
      241 cagmgvtilp ewivapamas geleavlpgm gtvpgtmhfv yssrrgllpg vralvdylae
      301 rlpqaaqrnh mdcrkmrag
//
LOCUS       WP_235205386             155 aa            linear   BCT 02-MAR-2025
DEFINITION  pyridoxal-phosphate dependent enzyme, partial [Oleiagrimonas soli].
ACCESSION   WP_235205386
VERSION     WP_235205386.1
KEYWORDS    RefSeq.
SOURCE      Oleiagrimonas soli
  ORGANISM  Oleiagrimonas soli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Rhodanobacteraceae; Oleiagrimonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012512.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00291.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Oleiagrimonas soli"
                     /db_xref="taxon:1543381"
     Protein         <1..155
                     /product="pyridoxal-phosphate dependent enzyme"
     Region          <1..155
                     /region_name="IlvA"
                     /note="Threonine deaminase [Amino acid transport and
                     metabolism]; COG1171"
                     /db_xref="CDD:440784"
ORIGIN      
        1 alellqgvps ldmlltpvgg gglaagcaia aqalrpdltl laaepagadd tarslragrr
       61 vtdfvpdtvc dglratvgap nfavlqacgv avltvtdaqv laamrllwre lrqvvepssa
      121 tvmaavlahp hvfagrevgv vltggnvdld alpfl
//
LOCUS       WP_235205415             549 aa            linear   BCT 02-MAR-2025
DEFINITION  rhodanese-like domain-containing protein [Bordetella
            bronchiseptica].
ACCESSION   WP_235205415
VERSION     WP_235205415.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
REFERENCE   1  (residues 1 to 549)
  AUTHORS   Gliubich,F., Gazerro,M., Zanotti,G., Delbono,S., Bombieri,G. and
            Berni,R.
  TITLE     Active site structural features for chemically modified forms of
            rhodanese
  JOURNAL   J Biol Chem 271 (35), 21054-21061 (1996)
   PUBMED   8702871
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00581.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..549
                     /product="rhodanese-like domain-containing protein"
                     /calculated_mol_wt=58484
     Region          5..102
                     /region_name="PspE"
                     /note="Rhodanese-related sulfurtransferase [Inorganic ion
                     transport and metabolism]; COG0607"
                     /db_xref="CDD:440372"
     Region          118..224
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            189
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238089"
     Region          262..360
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            327
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238089"
     Region          390..485
                     /region_name="PspE"
                     /note="Rhodanese-related sulfurtransferase [Inorganic ion
                     transport and metabolism]; COG0607"
                     /db_xref="CDD:440372"
     Region          <459..>513
                     /region_name="SseA"
                     /note="3-mercaptopyruvate sulfurtransferase SseA, contains
                     two rhodanese domains [Inorganic ion transport and
                     metabolism]; COG2897"
                     /db_xref="CDD:442142"
ORIGIN      
        1 melstvselr dlratsdeya lfdvresaqa hqghifgatf lprrmlaari aslvprrstp
       61 ivlydeggpd prarlaaqtl arfgytgvrv ldgglrtwla qgeapcrgsn vpskwfgetv
      121 hahaatpalp iatlqawret gsahricdir speeygrari pgaagafgsd lawhaddlrr
      181 agqpvvvhcs grtrsiiace slrllgvqda yalengtmgw rlaglalerg pgsgslaasa
      241 asrrdgarrt qalaraagva sveaamlarw lderdagrtn lyvldirqva eyraghlpga
      301 ialpgglavq rtdeflpvra aqvvlvddde araalagywl ramglprvav lagglpawna
      361 agyalghgrg rprpadhada maarpcpahd vheagarmqr vyvdtqarfl agrpdaaewv
      421 pfggleawla arakrqdera vvlmahdesl arsaalnarl agfdaavlag gvtawqaqgl
      481 plasgpgggv aqaadvvvqp ydaglqamrd yleweqaltr qaiptlplyt ayrvprppaa
      541 dmeqdqeap
//
LOCUS       WP_235205440             286 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Bordetella bronchiseptica].
ACCESSION   WP_235205440
VERSION     WP_235205440.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..>286
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          21..>285
                     /region_name="CynX"
                     /note="Cyanate permease [Inorganic ion transport and
                     metabolism]; COG2807"
                     /db_xref="CDD:442057"
ORIGIN      
        1 msrslasalp aapgagaapa rhgrvvalvv gagivsamqv gkvpaalpel raaldaslaq
       61 aswllsafaa igaalgagvg mavdawgarr mavagmlaqg vasllgamag aigwllalrv
      121 aegigflavv vsapslivaa tgtaparara laawstfmpl gvaaamlsap aleylgwsgm
      181 wrlyglalla yacwlawgtr glpgmaaarr ttlaglratl aapgprlyam lfglytaayf
      241 sifgflpsil aerlhvapwa agplaalvva acvagnlggg allarg
//
LOCUS       WP_235205478             197 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4142 domain-containing protein, partial [Bordetella
            bronchiseptica].
ACCESSION   WP_235205478
VERSION     WP_235205478.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025013.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13628.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..>197
                     /product="DUF4142 domain-containing protein"
     Region          34..178
                     /region_name="COG3652"
                     /note="Predicted outer membrane protein, contains DUF4142
                     domain [Function unknown]"
                     /db_xref="CDD:442869"
ORIGIN      
        1 mgrlrslata atggrrlala arwlagllcl giwaaqaspa adeawlrraa qlaqtsaqaa
       61 alarqhgasg dvqayarqaa arlqdlgrel advahaqavt lpagpdvtqr thlqelaqqr
      121 eaafdrmylh wagvalgeet lrhyrqaaee aqaapvrefa vhtlpmlqnl lqdarrlarp
      181 ppqaeprklp pggpgep
//
LOCUS       WP_235205545            4150 aa            linear   BCT 02-MAR-2025
DEFINITION  autotransporter-associated beta strand repeat-containing protein
            [Pseudomonas fluorescens].
ACCESSION   WP_235205545
VERSION     WP_235205545.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas fluorescens
  ORGANISM  Pseudomonas fluorescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 4150)
  AUTHORS   Doyle,M.T., Tran,E.N. and Morona,R.
  TITLE     The passenger-associated transport repeat promotes virulence factor
            secretion efficiency and delineates a distinct autotransporter
            subtype
  JOURNAL   Mol Microbiol 97 (2), 315-329 (2015)
   PUBMED   25869731
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024353.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12951.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4150
                     /organism="Pseudomonas fluorescens"
                     /db_xref="taxon:294"
     Protein         1..4150
                     /product="autotransporter-associated beta strand
                     repeat-containing protein"
                     /calculated_mol_wt=396056
     Region          54..1632
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          856..2543
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          2615..>3836
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          3192..4150
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
ORIGIN      
        1 merrlvagak trvspltlai rlgllglvas laspealaac spgapvqgda vlctgvavip
       61 vapnnfasav nglrvtvdal armntvvgsv lsltgsgvsl tnlgvinpaf lgpigvlssg
      121 vvignsstsg nvsvlnsgti mgtiplvdva sllggaalni tngagfttil nnsgtigass
      181 igvsvlqpad apmvvvqggs qvnmtnsgvv tgrigfeasg svggvgnafi nagtlnggvs
      241 lgagrggntf tavtgslvsa gaglslgglv nvnlsfaptg tvdggaggtq ntlvldnqla
      301 gvnattqtgt assgqyinfn nlqikggnws lqgalvngst lftggtaafd nnaafgsgll
      361 singgtlias agnlslannv aigsggltvq gsngltlggt lsgagtlnms glgvlalnga
      421 ntyfngtfln sgglslgnas algagpltvt gsssldasta lslnnnitln nlatltvpgt
      481 anltlggnvd gvgalrkngt adltlsgnnt ylggttlnvg rlllgsnnal gfgnlvaags
      541 tslvsksqvt lnnnvtllga vslladgnnh ltlggtvtgg gsliktgtgn livngtntyg
      601 ggtqlsagal vlgasgalgs gllstsngts lnastqltlg nlldvtgnlt vggagdltlg
      661 gviggsgglt kngtakltln nantflagtt lnggtltlnn naalgtgnlt vgaastldng
      721 antalangll lnadlslagt nglalggvis gagqllkngg gnlllgvant fqggttlngg
      781 sltlgnggal gsgaltvaga stlnsttavt agnqinlnaa ltvdganalt lggviqgvgg
      841 likagtaslt lngnntyggt talnsgtlvv gsntalgsss lsasagtsls tgtvlgaaia
      901 lgngidllgn ltvigsnalt lggaisgsgg lvkdasgdli lgstnsyqgn talnlgklvv
      961 gangalgsgv lsaaggttld anatatlnnq vdltgavtva gtadlsltgp iigvgsltkn
     1021 gsanlslsgn nlfqgglnln agtltagsnt algvgnltvg gaatldsssa vtlanditln
     1081 agltvagsng ltlggalggt gplikegaan ltlngintyq agtvlnagsl tlgnasalgs
     1141 galtvggaas ldnsaaftlg nditlnanla lagnnnltlg gvisgagglt kngvadltlt
     1201 gnntftgain ilggtvfags aaalgdnagl nigagaslnl agngvlgdls gagvvdvgln
     1261 nsltvggant sttfggsltg sgslikvgsg qldltgvnsl sgntqvnagi lkvssslgsa
     1321 vvdvnaggtl tgggavlgtl ninsgghlal nsgdtlsaas lvvgsganld vnlgapsltp
     1381 lldvggnvsl dgnlnvsngg afgagiyrli nyggsltgqg ltvtgvpqgf nlgdvlvdvs
     1441 tasqvnvvvs vanmlfwdgs qtsgngtveg gngtwsvgas nwtaiggtpn sawaggfavf
     1501 tgaagtvsvd gtqqftgmqf asdgysvvgg aagqltavng stgntairvd ptltatlgvn
     1561 idgagklakl dsgtlvlngn nsytggtald ggalvvgsnt algsgllsaa agttlssnka
     1621 vilgndvala gdlsvagnna lalngvisga gglvkngtsq ltlggvntyl gptalntggl
     1681 ilanggalgn galnaaggtt ldsstavsvg nsinlagnlg iggsadltlg gaingagslt
     1741 kegaanliln sangflggit lnagtltlgn agalglgslt vggastlgnn aalnlgtqav
     1801 qlnadltlag tqdltlgglv sgagglikdg ganltlngln tyqggltlka gtltlgnaaa
     1861 lgtgglivtg natlannapl vlaggltvna gltvggshnl alagvvagng sliktgtsdl
     1921 tlsgnntfsg lldiqagsls tlgngalgnn stlnlaagta lnlgssaslg nlsgagtalv
     1981 glgntlslga nnqsstfggv laglgnvdkl gsgtltlsgs svltgntqvs agtlnvngql
     2041 asagvnvnsg atlggagtll gavniadggh lavksgstlt tgslvlgana nldaglgaps
     2101 tggtellkvl gnltldgtln isdiggfgag iyrlidytgv ltnhglqlgs lpgsilpgsl
     2161 dlqtaignqi nllvngstnv qfwdgsqlag ngaieggngt wnaaatnwtg lnggfnqgwt
     2221 pnslavfqgt agtvtvdgaq avtglqfvtd gynlvggtag gltlfngtgg ttavrvdptv
     2281 tatldvnlng ggtlakldsg tlvlngsnty tggtalnggt lilgnnsalg sgllttangt
     2341 tldtnaaval tngvalngnl tlggsnaltl agtvsgagsl ikngiasltl sgnntyvgpt
     2401 alnagglila snsalgagal ntsagttldt ttavtlangl nltgnlgilg tsdltlngpv
     2461 ngaggliksg ignltlagnn gyvggtqlna gsltvgtgsa lgsgallvns pasldssanv
     2521 tlgnavtlng altvagsngl sldgiidgaa qlikngganl slngansygg gtllnagtlt
     2581 vgsstalgsg nlsvggmatl dnsaplvlan aidlnadlti agshdltlag vlagngalik
     2641 ngtagltlsg nnlltgplnv mggtlttvga galgnasgvt vgsgatldlg ssaafntlag
     2701 ngalqvaagn tltiggnntf ggslggggal dkvgtgtlnl tgnsslsgat svtggtlnva
     2761 gslasssvtv nsgatlsggg tlsgavtvad gghlglssgs altvgslvlg gnanldvglg
     2821 tpvvgggggl lnvggdlvld gnlnvsdlgg fgtgvynlin ysgaltnngl tlgtlpssvi
     2881 addlqlqtai nnkvnlvvia pnttvqfwdg gqsigngaie ggngtwgsgt nwanvdgsln
     2941 qnwsdkfavf qgaagtvtve gsqsltgmqf vsdgynlvag tagqlnlvng gtgntavrvd
     3001 pnvtatlgvt lngsgtlakl dsgtlvlnaa ngytggtaln ggtlvvgnns algtgvltaa
     3061 ngttlasnta vtlgnnalln galtvggana ltldgvlsgn gslvktgtss ltlngvntyn
     3121 ggtglnagql tlgnnaalgs galsvggaaq ldgssalqla naialggqlt llgshdltls
     3181 gaisgsaslv ksgngalllt gsntygggtl lnggsttgst sslqgaiann aaltfeqnad
     3241 gtytgnltgs gsltktgtgd llltgnntft gsthvtaggl vvngtfnsaa iqvasgaslg
     3301 gsgqlagavs madgstltgg aatplsvgal alsagthldf algapgastt vvnvagnltl
     3361 dgtlnvsdag gfgvgvyqlf ryggsltdng lllgtlptsi vpgalslqta lanqlnllvq
     3421 atpgqiqfwn ggttspdgtv hggsgtwgpg tnwtdptgtq gqasnnqfav fggqggtvtv
     3481 agnqaftglq vldsgyalva gtggslsptn aadgslavvr inagvttevs aplvgsggin
     3541 ktdagtllls gantysggtt vsggtlvgnt tslqgaitnn anllfqqdsn gqfngtlagt
     3601 gtvikqgsgs llltgnqpls gavavnqgll qvgnasnpgt vlggqvtvan gaglsgngsv
     3661 gslinhgvvt pdsgklsvag nftnaadgtl nllitpsaag slavggsanl agslnvvnla
     3721 pytgpatytl ltagggvtgt fthtnlenla fldtalnysp nqvalavsrn ttsfasvaat
     3781 gnqravatal gsgaavggsa vqnalltgna agaraafdsl sgeihastas alledsryvr
     3841 davnermrqp gcyrqddprn slapsenrls sagchgemvg wmrvlgtwgh mggdsdtarl
     3901 drnlsgfllg tdkqlddtwr agvaagytrs dldakrrhss adidsyhlma ytayqqeafa
     3961 arlgvgytwh dieskrdvav gaegqrlkad ykarsaqvfg evgytlqagg lavepfagla
     4021 yvnydsdtlk ekggsaalkg dadqditfst lgvrlgktit lgngssitpr gsigwrhafg
     4081 dtqpdadlsf inggasfstq gvpiakdsav veagvdyqis pngklglgys gqlsrndkdh
     4141 amtisfslgf
//
LOCUS       WP_235205593              81 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2790 domain-containing protein [Pseudomonas fluorescens].
ACCESSION   WP_235205593
VERSION     WP_235205593.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas fluorescens
  ORGANISM  Pseudomonas fluorescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022429.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10976.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Pseudomonas fluorescens"
                     /db_xref="taxon:294"
     Protein         1..81
                     /product="DUF2790 domain-containing protein"
                     /calculated_mol_wt=8933
     Region          1..80
                     /region_name="DUF2790"
                     /note="Protein of unknown function (DUF2790); cl12550"
                     /db_xref="CDD:472325"
ORIGIN      
        1 mssvaaaqdl tarapsesiv idgetlplkr pdswfvkdid riisispvse rcevapvrmv
       61 ymdseqkkyv leyrvmgngc n
//
LOCUS       WP_235205678             389 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Cupriavidus sp. SK-4].
ACCESSION   WP_235205678
VERSION     WP_235205678.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-4
  ORGANISM  Cupriavidus sp. SK-4
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Cupriavidus sp. SK-4"
                     /db_xref="taxon:574750"
     Protein         1..389
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=42718
     Region          14..369
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mnpsepsaqp eslrillvtt glrmggaeqq vaalakefia rgnsvalisl tpdcevpmpd
       61 averlmldlr ktplsmvhal lkarrfalew rpdivnshmf hanlfarsls ricrlpplic
      121 aahsfseggr lrmlcyrltd rwctlttqvs qasraemira gavrpdrvrv myngidtekf
      181 kpdvalrert raqlgidsra hliltigrla vekaqdrlid afqrmnrsqt trlfvagdgp
      241 qraalqeris kyglhdavsl lgtrhdipal lnaadlfvls srvegmplai gealacgrpv
      301 vatsapgvke lmgdigtmvp iddtdalala mtqsfaaeag tdgqrdmrrq rivthfgiaa
      361 aadrwlslyr emhceaseha rctrscgda
//
LOCUS       WP_235205685             330 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Cupriavidus sp.
            SK-4].
ACCESSION   WP_235205685
VERSION     WP_235205685.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-4
  ORGANISM  Cupriavidus sp. SK-4
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
REFERENCE   1  (residues 1 to 330)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Cupriavidus sp. SK-4"
                     /db_xref="taxon:574750"
     Protein         1..330
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=34291
     Region          29..284
                     /region_name="PRK11013"
                     /note="DNA-binding transcriptional regulator LysR;
                     Provisional"
                     /db_xref="CDD:236819"
ORIGIN      
        1 mrqrgrsdal agagersgag vaapsggpln lrqievfqti mlagsvsgag rmlhvsqpav
       61 srvlaltesr lgyplferar gkllptpear rlfaeveqvy sgvqrvndla aalrrdgagt
      121 lrvvasaafa qqlvpralaq lraggvptri dyrsvtfdel vgiflsgrad vgvsmvpagh
      181 ptlsstllgr qpmlcvlppd hplagrevvt pedfagsawi gyppdtplgr alagffgdsd
      241 sgapaievhs pvtacafvqq glglalvdaw svtpamraal avrpvlpavg leiwathssl
      301 aplplagrrf lasvgkvlrd iqppaacvqg
//
LOCUS       WP_235205706              65 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Cupriavidus sp. SK-4].
ACCESSION   WP_235205706
VERSION     WP_235205706.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-4
  ORGANISM  Cupriavidus sp. SK-4
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
REFERENCE   1  (residues 1 to 65)
  AUTHORS   Mullin,D.A., Zies,D.L., Mullin,A.H., Caballera,N. and Ely,B.
  TITLE     Genetic organization and transposition properties of IS511
  JOURNAL   Mol Gen Genet 254 (4), 456-463 (1997)
   PUBMED   9180700
REFERENCE   2  (residues 1 to 65)
  AUTHORS   Fischer,J., Maier,H., Viell,P. and Altenbuchner,J.
  TITLE     The use of an improved transposon mutagenesis system for DNA
            sequencing leads to the characterization of a new insertion
            sequence of Streptomyces lividans 66
  JOURNAL   Gene 180 (1-2), 81-89 (1996)
   PUBMED   8973350
REFERENCE   3  (residues 1 to 65)
  AUTHORS   Zekri,S. and Toro,N.
  TITLE     Identification and nucleotide sequence of Rhizobium meliloti
            insertion sequence ISRm6, a small transposable element that belongs
            to the IS3 family
  JOURNAL   Gene 175 (1-2), 43-48 (1996)
   PUBMED   8917074
  REMARK    Erratum:[Gene 1997 Mar 25;188(1):149]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01527.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Cupriavidus sp. SK-4"
                     /db_xref="taxon:574750"
     Protein         1..>65
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
ORIGIN      
        1 mtrygkdfkd ravarllppe saavevvsre lgvavatler wradamsmpa rerawtaaar
       61 feagl
//
LOCUS       WP_235205420             294 aa            linear   BCT 02-MAR-2025
DEFINITION  major capsid protein, partial [Bordetella bronchiseptica].
ACCESSION   WP_235205420
VERSION     WP_235205420.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
REFERENCE   1  (residues 1 to 294)
  AUTHORS   White,H.E., Sherman,M.B., Brasiles,S., Jacquet,E., Seavers,P.,
            Tavares,P. and Orlova,E.V.
  TITLE     Capsid structure and its stability at the late stages of
            bacteriophage SPP1 assembly
  JOURNAL   J Virol 86 (12), 6768-6777 (2012)
   PUBMED   22514336
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039452.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20036.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..>294
                     /product="major capsid protein"
     Region          1..294
                     /region_name="Gp13-like"
                     /note="Major capsid protein 13-like; pfam20036"
                     /db_xref="CDD:466267"
ORIGIN      
        1 mpaiietlgq qiqkfnaasr gafmlttagf egdflqesfy qaihgarrrv dryaangsas
       61 ptdltqlkhs svkvaggfgp iryepsqmtw lekptaegie vasrnfaeal lqdqlntaia
      121 alvaaisnqa tatvnvsakt gltysvlnda hakfgdssgl ivanvmsgqv yhkligqnlv
      181 naqqlfeyga vtvvdilgkt vvvtdapaly atgtpnlqkv lglvagaatv sdggdlitni
      241 etsngkerie ttfqadytfg lglkgytwde atggksptda elatgtnwdk vatd
//
LOCUS       WP_235205763             367 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Cupriavidus sp. SK-4].
ACCESSION   WP_235205763
VERSION     WP_235205763.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-4
  ORGANISM  Cupriavidus sp. SK-4
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Cupriavidus sp. SK-4"
                     /db_xref="taxon:574750"
     Protein         1..367
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=36388
     Region          1..350
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(2..3,6..7,10,42,92..93,95..97,100,120,123..124,127,
                     195,198..199,202..204,207,235,239,290..291,295,299,314,
                     317..318,321..322,325)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mvgaaefmls pmlapladaf attparasgl vsayalsyav aaplmgwfsd ragrrrvlla
       61 alllfaldgi altlvptlha amalrilggl aaaatiptvf aliadlvppa rqagamgsvm
      121 lgmtagiaag pavagvladg fgwrapflvt aggclaafla gchvlphnlp rsgdsqekfr
      181 ntptsssill pliakgawng savagyvlag evlrlryglg vagvgaalsv fglglavgnl
      241 lagrasqcfa reesvlmlat alvavamtlf ttaimglpgs lgcllawgaa lgiaapssta
      301 ilarraaaak gqvlavsesi nnlavlmlmp vaagslavhg tvpaallvgg cclagvaltv
      361 adrrmta
//
LOCUS       WP_235205770              43 aa            linear   BCT 02-MAR-2025
DEFINITION  TorF family putative porin, partial [Cupriavidus sp. SK-4].
ACCESSION   WP_235205770
VERSION     WP_235205770.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-4
  ORGANISM  Cupriavidus sp. SK-4
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
REFERENCE   1  (residues 1 to 43)
  AUTHORS   Bordi,C., Ansaldi,M., Gon,S., Jourlin-Castelli,C., Iobbi-Nivol,C.
            and Mejean,V.
  TITLE     Genes regulated by TorR, the trimethylamine oxide response
            regulator of Shewanella oneidensis
  JOURNAL   J Bacteriol 186 (14), 4502-4509 (2004)
   PUBMED   15231782
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021230.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09694.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..43
                     /organism="Cupriavidus sp. SK-4"
                     /db_xref="taxon:574750"
     Protein         <1..>43
                     /product="TorF family putative porin"
     Region          1..>43
                     /region_name="Gcw_chp"
                     /note="Bacterial protein of unknown function (Gcw_chp);
                     cl09901"
                     /db_xref="CDD:299108"
ORIGIN      
        1 tftanvslvs dyryrgisqt nlrpaiqggf dyahesgfyv gnw
//
LOCUS       WP_235205783              55 aa            linear   BCT 02-MAR-2025
DEFINITION  glutathione S-transferase N-terminal domain-containing protein,
            partial [Cupriavidus sp. SK-4].
ACCESSION   WP_235205783
VERSION     WP_235205783.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-4
  ORGANISM  Cupriavidus sp. SK-4
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024809.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13417.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..55
                     /organism="Cupriavidus sp. SK-4"
                     /db_xref="taxon:574750"
     Protein         1..>55
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /GO_process="GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
     Region          6..>51
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 madiilhqya tspfsekvrl algakglawq aveipailpk pdllaltggy rrtpg
//
LOCUS       WP_235205790             215 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Cupriavidus sp. SK-4].
ACCESSION   WP_235205790
VERSION     WP_235205790.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-4
  ORGANISM  Cupriavidus sp. SK-4
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Cupriavidus sp. SK-4"
                     /db_xref="taxon:574750"
     Protein         1..>215
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          11..>188
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mtmsyqprra wltavllfff lvvnamdkmv vgllaapmmd elgltpaqfg lvgssffwlf
       61 avsgvlggfl anrtptsrll vcmalawslc qiplalsssl avlivsrill gfmegpaapv
      121 aihacykwfp drrrnlpvav ltqgagigiv lagflipava vhwgwranfy vlaalgvlwa
      181 vawlalgreg tlderpaghd aphapaappp ppppp
//
LOCUS       WP_235205795             418 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Cupriavidus sp. SK-4].
ACCESSION   WP_235205795
VERSION     WP_235205795.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-4
  ORGANISM  Cupriavidus sp. SK-4
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Cupriavidus sp. SK-4"
                     /db_xref="taxon:574750"
     Protein         1..418
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=43373
     Region          25..391
                     /region_name="PRK11551"
                     /note="putative 3-hydroxyphenylpropionic transporter MhpT;
                     Provisional"
                     /db_xref="CDD:236927"
ORIGIN      
        1 meaaqadavp fepdgtqrlq whvyilcglv afldgfdtqa igpaadaiaa sigidikdfg
       61 pvfsasqigf ltgamifsal gdrfgrkrll vagtviiafs slgtafagsy helvairila
      121 glglggvtpl fislasefap palrarvvtm lwaavpiggm mgsftssvtl sqfgwqaiff
      181 lgggtplllv palffllpes reiqrgsndn gapqlrvspi galfgegrgl atlwlwlasw
      241 miwmllvvvg vwtpsllqra gwtipmaamm lgllnaggva gtfligaglr yfppqralml
      301 aliaaaaslv mlgtfahsfa vvavaaslag ffssaaggcl lalsaslype rvratgvgws
      361 lgfgktgavl gplcvglllg fqwstasiys aialpgllaa vlvfllsrts tfraaikq
//
LOCUS       WP_235205825             458 aa            linear   BCT 02-MAR-2025
DEFINITION  alginate export family protein [Cupriavidus sp. SK-4].
ACCESSION   WP_235205825
VERSION     WP_235205825.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-4
  ORGANISM  Cupriavidus sp. SK-4
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
REFERENCE   1  (residues 1 to 458)
  AUTHORS   Whitney,J.C., Hay,I.D., Li,C., Eckford,P.D., Robinson,H.,
            Amaya,M.F., Wood,L.F., Ohman,D.E., Bear,C.E., Rehm,B.H. and
            Howell,P.L.
  TITLE     Structural basis for alginate secretion across the bacterial outer
            membrane
  JOURNAL   Proc Natl Acad Sci U S A 108 (32), 13083-13088 (2011)
   PUBMED   21778407
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024765.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13372.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Cupriavidus sp. SK-4"
                     /db_xref="taxon:574750"
     Protein         1..458
                     /product="alginate export family protein"
                     /calculated_mol_wt=49630
     Region          61..446
                     /region_name="Alginate_exp"
                     /note="Alginate export; cl16257"
                     /db_xref="CDD:472886"
ORIGIN      
        1 mllaavggas aqplpsppgv pppfkllrye edyrylrdpa mrtgfwdpak yvplgspgwf
       61 vsfggeirer fedysasnfg vpgprgdgyl mhrallhadl hageslrafv qlgnqlamgk
      121 dvttppyvdq ldvqqafvdl rvplpapaqd pllvrvgrqe mafgaqrlvs irdapnvrra
      181 fdglrlgssl gsarvdafat rpvllkdgsf ddrpnqaqgf wgvyatmpaa flpatsadly
      241 ylgfendral fsdgsgaerr hslggrlsgr hgrwdwdwea lvqfgslasq qirawgfstd
      301 tgytfaasaw rprtgikatm gsgdrnphdg tigtynglfp klayfnqagl igasnvldiq
      361 psltlvpaag ikltfacdfi wratthdavy tssgipvpgt agrsgqysss qlsvdvawqa
      421 srhvlvngga vyvdesrtlk avgghntrfl ylalgytf
//
LOCUS       WP_235205910             990 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein [Cupriavidus sp. SK-4].
ACCESSION   WP_235205910
VERSION     WP_235205910.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-4
  ORGANISM  Cupriavidus sp. SK-4
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..990
                     /organism="Cupriavidus sp. SK-4"
                     /db_xref="taxon:574750"
     Protein         1..990
                     /product="DUF6531 domain-containing protein"
                     /calculated_mol_wt=109324
     Region          28..117
                     /region_name="FIX_RhsA-like"
                     /note="Found in type sIX effector (FIX) domain of unknown
                     function co-occurring with RhsA domains with RHS repeats;
                     cd20743"
                     /db_xref="CDD:410941"
     Region          357..432
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
     Region          <542..>939
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
     Region          720..761
                     /region_name="YD_repeat_2x"
                     /note="YD repeat (two copies); TIGR01643"
                     /db_xref="CDD:273728"
ORIGIN      
        1 mtgptseakr repqtavapl ntiaiedigk gaarfdawlq gasgglvtle riktvagslp
       61 vvgniialvd algdvitlvr tksqdfldwv slginligvl pmppsmaaar mslrptlalv
      121 rqelrqaaka algdglievl vghlnatiig eiddfvqkae tklstilnda gelgekmvle
      181 vagglekval gnlnaagnaq tavsqarega sqllhdpkka ignflsatwn aykaagkava
      241 ntavklgmpe elrqqvaanv gqlrrigpvl raqmtklagp aaahsigwll smlaqavarw
      301 rkkkgtgqaa nvkpkqtsea rktgqhgqle atnhqvpaka sagrkncpap agskrsisfa
      361 tgdetlshtd fslpglfpie wartyrsslg aydggeqgar witpyttrfd vlrkdgqesl
      421 cyhaadgrsh dyplpavgkf hrdpienvtl vrvsehaltl argfesqeay qrhgphfrli
      481 gitlrsgagv alhydhridg dtvlsdviay qgetvtahvr irldehgria elwqiaegnl
      541 vrqlsryhyd eagnlvmaqd enavhwdyay rrhlvtrytd rtgrgmnlqw dgdgpnarav
      601 rewaddgsfd trlewdenir ltyvtdahgh etwhyydilg ytyrikhpdg lsewffrdda
      661 knvvkhvhtd gavdryayde rgnlvehirp ddsvvhyawd dkdqrikird aegglwlrdy
      721 dikgnlteei dplghktaya ynksglpvei tdakggkkql aynatgqlas ytdcsgktsa
      781 wkygergelv kftdaagnat qyhyeagqla svthpdqrve rferdaegrl lvhtdalhrr
      841 tawrynevgl iaertdaagq tlgyrwdrlg rlatltnens astefqydpv grllretgfd
      901 gktteynydp atglldwtvd sgqlmtdfvf damgrltrrr aglidadnrv prvlteafty
      961 ngngrlvlae nadsrlqwfh eggptrpgry
//
LOCUS       WP_235205911             187 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: winged helix DNA-binding protein [Cupriavidus].
ACCESSION   WP_235205911
VERSION     WP_235205911.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus
  ORGANISM  Cupriavidus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024854.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13463.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Cupriavidus"
                     /db_xref="taxon:106589"
     Protein         1..187
                     /product="winged helix DNA-binding protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=21474
     Region          1..183
                     /region_name="COG5631"
                     /note="Predicted transcription regulator, contains HTH
                     domain, MarR family [Transcription]"
                     /db_xref="CDD:444358"
ORIGIN      
        1 mpktpsnstp sakidrtaeq hrwhlatddf sveitdleya vmrayqsflr wqseclaavt
       61 gitlsgqent llhiirmher pktikdllhm tnrqdvpnmq yelrkllkae lvdkygsart
      121 giyyfatdeg irvcdefarl rretlletaq gefgpksgtl kaagqleqle kvyeiatrei
      181 atyhrrr
//
LOCUS       WP_235205953             153 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3300 domain-containing protein, partial [Cupriavidus sp. SK-4].
ACCESSION   WP_235205953
VERSION     WP_235205953.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-4
  ORGANISM  Cupriavidus sp. SK-4
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023165.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11737.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Cupriavidus sp. SK-4"
                     /db_xref="taxon:574750"
     Protein         1..>153
                     /product="DUF3300 domain-containing protein"
     Region          17..>145
                     /region_name="DUF3300"
                     /note="Protein of unknown function (DUF3300); pfam11737"
                     /db_xref="CDD:463336"
ORIGIN      
        1 msregavqaq kepapykaee iealvapial ypdpllsqvl mastypleva laarwskahp
       61 nlkgddavka vqneswdvsv kslvafpqil apmgdkldwt qklgdaflaq qkevfnavqr
      121 lrvraqqagh lksgpqqtvt vetatsgeaa qqt
//
LOCUS       WP_235205990             108 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5372 family protein, partial [Cupriavidus sp. SK-4].
ACCESSION   WP_235205990
VERSION     WP_235205990.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-4
  ORGANISM  Cupriavidus sp. SK-4
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17342.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Cupriavidus sp. SK-4"
                     /db_xref="taxon:574750"
     Protein         <1..108
                     /product="DUF5372 family protein"
     Region          19..95
                     /region_name="DUF5372"
                     /note="Family of unknown function (DUF5372); pfam17342"
                     /db_xref="CDD:435873"
ORIGIN      
        1 grsartaqal nehlgwaeir hpfhplrgqr ypvlktrrva gvdtlllghv ergsfsiare
       61 wtdwgapave ddceipvsrf dlgmllelia lidqlaasss kksstkga
//
LOCUS       WP_235206123             254 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Coxiella burnetii].
ACCESSION   WP_235206123
VERSION     WP_235206123.1
KEYWORDS    RefSeq.
SOURCE      Coxiella burnetii
  ORGANISM  Coxiella burnetii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Coxiellaceae; Coxiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Coxiella burnetii"
                     /db_xref="taxon:777"
     Protein         1..254
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=27590
     Region          <52..241
                     /region_name="UhpC"
                     /note="Sugar phosphate permease [Carbohydrate transport
                     and metabolism]; COG2271"
                     /db_xref="CDD:441872"
ORIGIN      
        1 mlsliasfgv llallilfiv rnkprggeqa liylkrpqgl sqslkllfkn sqmwyiafys
       61 acvyasivvl gaiwgtdyle argltqrlaa dmvslawfgf avacpllgaf sdiarrrkpt
      121 lifcsllgll staiityvpi hehwiygflf fligmaasgq nigfaiiseh sslttrasgl
      181 glnnamiill gaiipplisl fidvshgahl tasdfiigfs flpalsvisf fiaafliket
      241 ygkpqrepiv lktg
//
LOCUS       WP_235206613             182 aa            linear   BCT 02-MAR-2025
DEFINITION  barstar family protein [Paenibacillus tyrphae].
ACCESSION   WP_235206613
VERSION     WP_235206613.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus tyrphae
  ORGANISM  Paenibacillus tyrphae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 182)
  AUTHORS   Buckle,A.M., Schreiber,G. and Fersht,A.R.
  TITLE     Protein-protein recognition: crystal structural analysis of a
            barnase-barstar complex at 2.0-A resolution
  JOURNAL   Biochemistry 33 (30), 8878-8889 (1994)
   PUBMED   8043575
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013500.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01337.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Paenibacillus tyrphae"
                     /db_xref="taxon:1501230"
     Protein         1..182
                     /product="barstar family protein"
                     /calculated_mol_wt=21081
     Region          68..153
                     /region_name="Barstar_like"
                     /note="Barstar is an intracellular inhibitor of barnase,
                     an extracellular ribonuclease of Bacillus
                     amyloliquefaciens. Barstar binds tightly to the barnase
                     active site and sterically blocks it, thus inhibiting its
                     potentially lethal RNase activity inside the...; cl01048"
                     /db_xref="CDD:470045"
     Site            order(95,97,99..101,105,143)
                     /site_type="other"
                     /note="RNAase interaction site [polypeptide binding]"
                     /db_xref="CDD:238273"
ORIGIN      
        1 mnvvlngdlp yvmtseeldi wekwrasypv ainewamlde dhrrawlkiv styqpkrrdd
       61 eeseqrlffl dgtyvtdycs ffcalgeair gpggyygfdf nsfidclhgg fgarapftli
      121 wknvqvaqky ldlqawlkei dykrkrdvkl naeaifeelg nrplfqaive nlqeqgvtvv
      181 fa
//
LOCUS       WP_235206653             372 aa            linear   BCT 02-MAR-2025
DEFINITION  amidase domain-containing protein [Paenibacillus tyrphae].
ACCESSION   WP_235206653
VERSION     WP_235206653.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus tyrphae
  ORGANISM  Paenibacillus tyrphae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024083.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12671.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Paenibacillus tyrphae"
                     /db_xref="taxon:1501230"
     Protein         1..372
                     /product="amidase domain-containing protein"
                     /calculated_mol_wt=41289
     Region          216..366
                     /region_name="Amidase_6"
                     /note="Putative amidase domain; cl18613"
                     /db_xref="CDD:473121"
ORIGIN      
        1 mmlgkkiaag aimlfaltsa vafaddtalk agdakvrdea qkfvvdfvgq aykpyytlnt
       61 idsdiseysv kdnvltarvn islsktlkak svdeipyvkg mksqsavlkq tnaisamese
      121 qvisdrlkdl seyigtateq ndsfrltakv ingnidnqsa kleflnymdw ipaahfvpen
      181 eetmmkhgqm dlleavttnr aftvrsavqp qaaftynria ardyankyts tvtgspyydt
      241 skwnknykfh tesggvdcan yvsqamyagg iptdstwkpe siawvntgrn isngledymv
      301 rtkkyfyktt kattpaggfi saldyshvmf vvandtvtmq ysahtndklk asfanfsdsk
      361 feffyinsay ln
//
LOCUS       WP_235205978             181 aa            linear   BCT 02-MAR-2025
DEFINITION  BBE domain-containing protein [Cupriavidus sp. SK-4].
ACCESSION   WP_235205978
VERSION     WP_235205978.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus sp. SK-4
  ORGANISM  Cupriavidus sp. SK-4
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
REFERENCE   1  (residues 1 to 181)
  AUTHORS   Facchini,P.J., Penzes,C., Johnson,A.G. and Bull,D.
  TITLE     Molecular characterization of berberine bridge enzyme genes from
            opium poppy
  JOURNAL   Plant Physiol 112 (4), 1669-1677 (1996)
   PUBMED   8972604
REFERENCE   2  (residues 1 to 181)
  AUTHORS   Kutchan,T.M. and Dittrich,H.
  TITLE     Characterization and mechanism of the berberine bridge enzyme, a
            covalently flavinylated oxidase of benzophenanthridine alkaloid
            biosynthesis in plants
  JOURNAL   J Biol Chem 270 (41), 24475-24481 (1995)
   PUBMED   7592663
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019643.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08031.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Cupriavidus sp. SK-4"
                     /db_xref="taxon:574750"
     Protein         1..181
                     /product="BBE domain-containing protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=20358
     Region          132..176
                     /region_name="BBE"
                     /note="Berberine and berberine like; pfam08031"
                     /db_xref="CDD:369658"
ORIGIN      
        1 mlaplkdyga paecrfeatp ylqiqragda ifprgrryyw kaqflrelad paidtllnay
       61 anargampll vlqqvggaia rvprtetpyv nrdalydcfp isiwdnpadd eanvrwaret
      121 wdairpfstg gvyannlgee gedrvraayg enfqrlvelk nkydpanffr lnqnvrpgav
      181 a
//
LOCUS       WP_235206682             496 aa            linear   BCT 02-MAR-2025
DEFINITION  esterase-like activity of phytase family protein [Paenibacillus
            tyrphae].
ACCESSION   WP_235206682
VERSION     WP_235206682.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus tyrphae
  ORGANISM  Paenibacillus tyrphae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13449.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Paenibacillus tyrphae"
                     /db_xref="taxon:1501230"
     Protein         1..496
                     /product="esterase-like activity of phytase family
                     protein"
                     /calculated_mol_wt=53977
     Region          <46..89
                     /region_name="Cu_amine_oxidN1"
                     /note="Copper amine oxidase N-terminal domain; pfam07833"
                     /db_xref="CDD:400265"
     Region          114..494
                     /region_name="COG4222"
                     /note="Uncharacterized conserved protein, contains a
                     phytase-like domain [Function unknown]"
                     /db_xref="CDD:443366"
ORIGIN      
        1 mmkrwlkkrk wlvlslaamt iigaqtaaaa eggmeavgtk fgiwsggkev ktdkapvlid
       61 gstyvplral gealgkqvew newtqsirlk empkvaavhe wknpgtlvgs lkegglsglv
      121 hlpgdpadvf ytladrgpng efgkdklrtf pneayvpriy kikaaggtie vletiklhlp
      181 agktdkfskt aeltglpnle asdevpydgs gtkklaydpd gldlegiayn ptddtfwlsd
      241 eyrpsvlqvk rdgmvvgryv pqgakeqlva agaqteiydi lpavyakrip nrgfegvtis
      301 pdgkylyasi qspmavpdkk tgeasrnlri lkmdlaakkv vgeylyiaen adsftnvkqk
      361 dvvisdlsal stdvllvder dknsgkeaqi kriyradfsa atnllgtehs dnlekltlaq
      421 ikekgivpag kelivdvakl gypheklegl avvdkhtiav vndndfgvdg yddqgqlkvn
      481 gnptqmyliq vgeelk
//
LOCUS       WP_235206710             849 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase [Paenibacillus tyrphae].
ACCESSION   WP_235206710
VERSION     WP_235206710.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus tyrphae
  ORGANISM  Paenibacillus tyrphae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Paenibacillus tyrphae"
                     /db_xref="taxon:1501230"
     Protein         1..849
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=93360
     Region          42..299
                     /region_name="Peptidases_S8_S53"
                     /note="Peptidase domain in the S8 and S53 families;
                     cl10459"
                     /db_xref="CDD:415849"
     Site            order(110,173,262)
                     /site_type="active"
                     /db_xref="CDD:173787"
     Site            order(110,262)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:173787"
     Region          680..720
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          738..779
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          799..840
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
ORIGIN      
        1 mpvkkfniiv tlcilllwss wvpfpsiaaa eeardvqisa yptdplvekq aylqqihmse
       61 awdvatgnds iviaivdtgv dlnhpdlmpn lvkginliep gqpprddngh gtnvagiiga
      121 aanndkgiag ilwkaklmpv kavendgtgs eaklgegiry avdhgakivv lslglnkysd
      181 ymseivryae tkgvllvaat gnegnsvkyp aayptvlavg gmaadkkahk lsnsgpevdl
      241 vapwdvftta iggryehkdg tsmaapqvaa vcalawakyp wmkpyqirsl lrqtaedlsg
      301 ngwspgtgyg llradrvlkd pysehmykrn drkeqatpis vsktvsgsfe ngsdpnwftf
      361 eapydgsvkl eleldpkeei avthtdaggg vkdyslsaag pvtmpvkkgk sylklqlkna
      421 aakrklefkl ttsfeiykda yadngkqfka yvlpaqsqtl kgtfhrnndq dwymlpitqt
      481 gklsvrlsvd tnrmdpvlfv qkrgekgkti deggegesey fpvtdvypgd yyirvsnaeg
      541 yippitgeyt laiqykpkll dpngphdkpy satvmqpgtk yqglldksgg anwfsvnine
      601 eslvelrlsg ipqnirmtms ayngtlkpid svtnpdgtse arlsqlwqpg vyyirltadt
      661 afddrfyelk aevkplvggy adikghwaea vikqaserki idgydqyrfm pdrpitraea
      721 aavlvrglkl tkqkevrytd fgpdhwaypf iakaaqaeii dgypdgslap dryltrmema
      781 amlarsmkms gkqrgtspfa dvketdwgvs ilkqlkaegw itgfpdgtfr penqatraef
      841 vtlltrtmn
//
LOCUS       WP_235206713              42 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6254 family protein [Paenibacillus tyrphae].
ACCESSION   WP_235206713
VERSION     WP_235206713.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus tyrphae
  ORGANISM  Paenibacillus tyrphae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040037.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19767.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..42
                     /organism="Paenibacillus tyrphae"
                     /db_xref="taxon:1501230"
     Protein         1..42
                     /product="DUF6254 family protein"
                     /calculated_mol_wt=4856
     Region          1..36
                     /region_name="DUF6254"
                     /note="Family of unknown function (DUF6254); pfam19767"
                     /db_xref="CDD:437599"
ORIGIN      
        1 mshskrrken qwkirkqsqq phgkikslaa ysdeydaqqs gr
//
LOCUS       WP_235206723             681 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5693 family protein [Paenibacillus tyrphae].
ACCESSION   WP_235206723
VERSION     WP_235206723.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus tyrphae
  ORGANISM  Paenibacillus tyrphae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039831.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18949.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Paenibacillus tyrphae"
                     /db_xref="taxon:1501230"
     Protein         1..681
                     /product="DUF5693 family protein"
                     /calculated_mol_wt=76900
     Region          38..668
                     /region_name="DUF5693"
                     /note="Family of unknown function (DUF5693); pfam18949"
                     /db_xref="CDD:465928"
ORIGIN      
        1 mkwnqralkw lwwlvilgml aaipvafern eteqktgrkv efvfdyrnll eisdlqtdpr
       61 kfvleqldem kqhgiqsmav yeatlnelkl srrielftsh easaltqtpi spnenftyll
      121 faekeseqql qpmiqkafae lnvntrawsy knqpgmiiem smedallktm dpdpitlqll
      181 kekgytivir lsnrrafdea rmdellgklq algvkrmiid getvpgfvsd kdlhnlesma
      241 elmkkhqigl astealyqkt pprgfntisk kidynvvrlh pltesdsqkl tenitpeelk
      301 griqdyadrf llavkdrnir miflhakavk stdkgkivhp ldsiyltlkg pdgaipqihk
      361 vgyqtgpata fvpvhsgwqp vakmllsiga ialivltisy fvpeialavf llglvgsagm
      421 yvwnnslfsq alalgagtsa ptlammfair tarnklnrrd ekkwlftvvl llrttllsli
      481 gvlfivglln qityslvleq frgvgilhaa pialtvlywl lfsdetsyrd kvrqiqgflh
      541 anirvlwviv avvvaaagyy yisrtgnegq assferyfrs flentlgvrp rtkeflishp
      601 lfllgaylcy kyrsalllvl igvigqasvv dtfahlhtpl vissirvvyg vafglligvv
      661 livvweiisr swqrwaprls e
//
LOCUS       WP_235206938             549 aa            linear   BCT 02-MAR-2025
DEFINITION  rhodanese-like domain-containing protein [Bordetella
            bronchiseptica].
ACCESSION   WP_235206938
VERSION     WP_235206938.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
REFERENCE   1  (residues 1 to 549)
  AUTHORS   Gliubich,F., Gazerro,M., Zanotti,G., Delbono,S., Bombieri,G. and
            Berni,R.
  TITLE     Active site structural features for chemically modified forms of
            rhodanese
  JOURNAL   J Biol Chem 271 (35), 21054-21061 (1996)
   PUBMED   8702871
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00581.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..549
                     /product="rhodanese-like domain-containing protein"
                     /calculated_mol_wt=58484
     Region          5..102
                     /region_name="PspE"
                     /note="Rhodanese-related sulfurtransferase [Inorganic ion
                     transport and metabolism]; COG0607"
                     /db_xref="CDD:440372"
     Region          118..224
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            189
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238089"
     Region          262..360
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            327
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238089"
     Region          390..485
                     /region_name="PspE"
                     /note="Rhodanese-related sulfurtransferase [Inorganic ion
                     transport and metabolism]; COG0607"
                     /db_xref="CDD:440372"
     Region          <459..>513
                     /region_name="SseA"
                     /note="3-mercaptopyruvate sulfurtransferase SseA, contains
                     two rhodanese domains [Inorganic ion transport and
                     metabolism]; COG2897"
                     /db_xref="CDD:442142"
ORIGIN      
        1 melstvselr dlratsdeya lfdvresaqa hqghifgatf lprrmlaari aslvprrstp
       61 ivlydeggpd prarlaaqtl arfgytgvrv ldgglrtwla qgeapcrgsn vpskwfgetv
      121 hahaatpalp italqawret gsahricdir speeygrari pgaagafgsd lawhaddlrr
      181 agqpvvvhcs grtrsiiace slrllgvqda yalengtmgw rlaglalerg pgsgslaasa
      241 asrrdgarrt qalaraagva sveaamlarw lderdagrtn lyvldirqva eyraghlpga
      301 ialpgglavq rtdeflpvra aqvvlvddde araalagywl ramglprvav lagglpawna
      361 agyalghgrg rprpadhada maarpcpahd vheagarmqr vyvdtqarfl agrpdaaewv
      421 pfggleawla arakrqdera vvlmahdesl arsaalnarl agfdaavlag gvtawqaqgl
      481 plasgpgggv aqaadvvvqp ydaglqamrd yleweqaltr qaiptlplyt ayrvprppaa
      541 dmeqdqeap
//
LOCUS       WP_235206971             302 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6427 family protein [Pedobacter sp. V48].
ACCESSION   WP_235206971
VERSION     WP_235206971.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter sp. V48
  ORGANISM  Pedobacter sp. V48
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040411.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19992.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Pedobacter sp. V48"
                     /db_xref="taxon:509635"
     Protein         1..302
                     /product="DUF6427 family protein"
                     /calculated_mol_wt=35383
ORIGIN      
        1 maifadlpps lqfeflepyt kfflqiplqn tfspagnvff agiiifvqai lfnrvvnnhg
       61 llskpgylpa llyvtasslf mpflilsptl icnflmiwim dkflkmaksl naimtmfdvg
      121 miiaigtliy fpfivmlaml wftlllyrsf swrewisglv gfltifffvg vyyywndnls
      181 mfykiwlplt nkfpsvftin yndylvlvpv vvmivlatlq lrenffrsfi strkafqmlf
      241 fmfiisivsf ytkpdfrlyh fllcvppgav llayyfsnak krwfyeslfl ilvfaiqyfl
      301 fv
//
LOCUS       WP_235206979             130 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxypeptidase-like regulatory domain-containing protein
            [Pedobacter sp. V48].
ACCESSION   WP_235206979
VERSION     WP_235206979.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter sp. V48
  ORGANISM  Pedobacter sp. V48
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
REFERENCE   1  (residues 1 to 130)
  AUTHORS   Cho,K.H. and Salyers,A.A.
  TITLE     Biochemical analysis of interactions between outer membrane
            proteins that contribute to starch utilization by Bacteroides
            thetaiotaomicron
  JOURNAL   J Bacteriol 183 (24), 7224-7230 (2001)
   PUBMED   11717282
REFERENCE   2  (residues 1 to 130)
  AUTHORS   Shipman,J.A., Berleman,J.E. and Salyers,A.A.
  TITLE     Characterization of four outer membrane proteins involved in
            binding starch to the cell surface of Bacteroides thetaiotaomicron
  JOURNAL   J Bacteriol 182 (19), 5365-5372 (2000)
   PUBMED   10986238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025092.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13715.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Pedobacter sp. V48"
                     /db_xref="taxon:509635"
     Protein         1..130
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /calculated_mol_wt=13705
     Region          27..>121
                     /region_name="OMP_RagA_SusC"
                     /note="TonB-linked outer membrane protein, SusC/RagA
                     family; TIGR04056"
                     /db_xref="CDD:274948"
ORIGIN      
        1 mkriftklsv ltflcflfin aasaqditir gvvsdgadkt tlpgvsvlvk gtqigtqtda
       61 tgkyaisapa natlvfsyig ynptemqvnn rtvinvelas ssqqleqvvv vgygtqkkid
      121 vxxicrqckr
//
LOCUS       WP_235207010             525 aa            linear   BCT 02-MAR-2025
DEFINITION  L,D-transpeptidase family protein [Pedobacter sp. V48].
ACCESSION   WP_235207010
VERSION     WP_235207010.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter sp. V48
  ORGANISM  Pedobacter sp. V48
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
REFERENCE   1  (residues 1 to 525)
  AUTHORS   Biarrotte-Sorin,S., Hugonnet,J.E., Delfosse,V., Mainardi,J.L.,
            Gutmann,L., Arthur,M. and Mayer,C.
  TITLE     Crystal structure of a novel beta-lactam-insensitive peptidoglycan
            transpeptidase
  JOURNAL   J Mol Biol 359 (3), 533-538 (2006)
   PUBMED   16647082
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015679.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03734.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Pedobacter sp. V48"
                     /db_xref="taxon:509635"
     Protein         1..525
                     /product="L,D-transpeptidase family protein"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=60697
     Region          64..523
                     /region_name="YcbB"
                     /note="Murein L,D-transpeptidase YcbB/YkuD [Cell
                     wall/membrane/envelope biogenesis]; COG2989"
                     /db_xref="CDD:442228"
ORIGIN      
        1 mkktvllvvl litmlsscnw fkdvpevgvv lsdhfknkly kkfdtavynv vfkkhldslk
       61 skfsnpntlt nyyytneykp elvtkffvng gldslqsyig rseqhgfspn lfrykqiesl
      121 latlhankfk sidevylvia dlelnaaegl ikynnfvyyg sinprklfsr yyvpvkrpds
      181 lsvtavlqtk diqklltsiq psspdyqvfq hklseykads gsksymvkti mvnmerlrwk
      241 lpelgdeyvq vnipdfsltw fknqdtltqm kvcvggkree gyadkikqyl ksgnlddkpk
      301 nhetpllysk lnsiqvnpiw nipvsiaqse iywqavrdpy ylsnsnikvy ykgkqigepd
      361 tiqwgkysre klpfqfkqgs gegnalgkfk fifdngssiy lhdtnnksaf skanraishg
      421 cvrvekplqf aetlvkdkye ydqlrmevnl ppidtnrmav yrkkmakkad tlnvyklkpk
      481 wfgvkkpvpl iinyitawsq ngslqfrpdv ygldetlwda mkkfm
//
LOCUS       WP_235207043             338 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Pedobacter sp.
            V48].
ACCESSION   WP_235207043
VERSION     WP_235207043.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter sp. V48
  ORGANISM  Pedobacter sp. V48
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
REFERENCE   1  (residues 1 to 338)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Pedobacter sp. V48"
                     /db_xref="taxon:509635"
     Protein         1..338
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=36925
     Region          8..330
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(12,14..15,17,36..38,76..78,117..119,144,148,
                     171..174)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(95,119,144,148)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mmtqkklalv sganghlgnn lvrflldkgi pvrasvrkid nktpftgldc evvqaditdk
       61 asfvkalagv etfyavgasf klwakdakke iydvniqgtk ntieaaaeag vkrivyvssi
      121 aaldytklpa kegngynpdr rdmyynsknd gerlafqlak dlgielvavm paamiggeaf
      181 lplnvsygvl klilnrqipv dtkitlnwid vkdvaegcwl aaekgrhger yilaneqcmt
      241 itdttklase lypelklkip gavpklmlfa iagimeclak isnkapvltr kdiamfsglq
      301 qnfdiskark elgfnpkkpe kavtdalayl mghqallk
//
LOCUS       WP_235207044             101 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Pectobacterium brasiliense].
ACCESSION   WP_235207044
VERSION     WP_235207044.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium brasiliense
  ORGANISM  Pectobacterium brasiliense
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 101)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 101)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025054.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13673.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Pectobacterium brasiliense"
                     /db_xref="taxon:180957"
     Protein         1..101
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=11396
     Region          1..>100
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
     Site            order(60..62,72..73)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
ORIGIN      
        1 mevwykvvdt thhflaikdr laiekelssf lstvkltlay epteraigfm ylhnghmeal
       61 fidpdyhvqg igkslvhtal sqysrlttdv neqntlavgf l
//
LOCUS       WP_235207046              64 aa            linear   BCT 02-MAR-2025
DEFINITION  nuclear transport factor 2 family protein [Pedobacter sp. V48].
ACCESSION   WP_235207046
VERSION     WP_235207046.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter sp. V48
  ORGANISM  Pedobacter sp. V48
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024865.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13474.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..64
                     /organism="Pedobacter sp. V48"
                     /db_xref="taxon:509635"
     Protein         1..64
                     /product="nuclear transport factor 2 family protein"
                     /calculated_mol_wt=7045
     Region          5..>50
                     /region_name="YybH"
                     /note="Ketosteroid isomerase homolog YybH [General
                     function prediction only]; COG4319"
                     /db_xref="CDD:443460"
ORIGIN      
        1 mnlpkvitdl ieaqnshdag aysslfsena nvfdegknhi graairkwie nsnqqyqttl
       61 kpis
//
LOCUS       WP_235206814              39 aa            linear   BCT 02-MAR-2025
DEFINITION  Spo0E family sporulation regulatory protein-aspartic acid
            phosphatase [Paenibacillus tyrphae].
ACCESSION   WP_235206814
VERSION     WP_235206814.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus tyrphae
  ORGANISM  Paenibacillus tyrphae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 39)
  AUTHORS   Grenha,R., Rzechorzek,N.J., Brannigan,J.A., de Jong,R.N., Ab,E.,
            Diercks,T., Truffault,V., Ladds,J.C., Fogg,M.J., Bongiorni,C.,
            Perego,M., Kaptein,R., Wilson,K.S., Folkers,G.E. and Wilkinson,A.J.
  TITLE     Structural characterization of Spo0E-like protein-aspartic acid
            phosphatases that regulate sporulation in bacilli
  JOURNAL   J Biol Chem 281 (49), 37993-38003 (2006)
   PUBMED   17001075
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020945.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09388.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..39
                     /organism="Paenibacillus tyrphae"
                     /db_xref="taxon:1501230"
     Protein         1..39
                     /product="Spo0E family sporulation regulatory
                     protein-aspartic acid phosphatase"
                     /GO_process="GO:0043937 - regulation of sporulation
                     [Evidence IEA]"
                     /calculated_mol_wt=4433
ORIGIN      
        1 meeaiqqgks ltcehivrls qeldkyilia qtrkmrcis
//
LOCUS       WP_235207078             263 aa            linear   BCT 02-MAR-2025
DEFINITION  NIPSNAP family protein [Pedobacter sp. V48].
ACCESSION   WP_235207078
VERSION     WP_235207078.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter sp. V48
  ORGANISM  Pedobacter sp. V48
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
REFERENCE   1  (residues 1 to 263)
  AUTHORS   Seroussi,E., Pan,H.Q., Kedra,D., Roe,B.A. and Dumanski,J.P.
  TITLE     Characterization of the human NIPSNAP1 gene from 22q12: a member of
            a novel gene family
  JOURNAL   Gene 212 (1), 13-20 (1998)
   PUBMED   9661659
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019590.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07978.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Pedobacter sp. V48"
                     /db_xref="taxon:509635"
     Protein         1..263
                     /product="NIPSNAP family protein"
                     /calculated_mol_wt=29980
     Region          159..261
                     /region_name="NIPSNAP"
                     /note="cl46801"
                     /db_xref="CDD:481141"
ORIGIN      
        1 mksktlfncc maviiftmgs smqsiaaahq kqfyqitvyh lktkaqeerv dkflseayvp
       61 aahrlgiktv gvfksadidt atdkkiyvfl afqslkqfse vsrlllkdke latkgadyvn
      121 aayndaafvr keniileaft gmptlkkpvf snakseriye lrsyesasek qhvnkvqmfn
      181 neeveifdri gsqavfygev lagsrmpnlm ylttysdkks rdehwkvfga dpkwkrvsal
      241 peyqnnvsrn dtqfivptdy sdf
//
LOCUS       WP_235207198             478 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5723 family protein [Pedobacter sp. V48].
ACCESSION   WP_235207198
VERSION     WP_235207198.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter sp. V48
  ORGANISM  Pedobacter sp. V48
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040164.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18990.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Pedobacter sp. V48"
                     /db_xref="taxon:509635"
     Protein         1..478
                     /product="DUF5723 family protein"
                     /calculated_mol_wt=54174
     Region          58..407
                     /region_name="TraF_2"
                     /note="F plasmid transfer operon, TraF, protein; cl16365"
                     /db_xref="CDD:472910"
ORIGIN      
        1 mrkylilfsf lflfnqlkaq qyglfntktl fdgfenpaqk tfvldssrky asnfflpyfg
       61 inainkgned imhklittgr lsvkdipigt nklnsiyqns niylfnfkif ksykyhkeig
      121 fswqlrsdlh akysneslav mddytrfinn snltanpfdn sgygqsyhqf sltyrenytk
      181 klafgvkvsl lsgisynslr tdnsaiqpgp tkdkialslk gtykasflea kdlekkdlip
      241 tfknpglals fgttytsksg vfimanlkdl giirwsnssy vsnfdkmlnp tiipeqnppl
      301 spkgkdqrir nqitdivkns avnksfytlt nakadflisk tfnfytpsfv lsknlfyngg
      361 daaivnkfyy ngfsvsaipi ynfnnlflfg mqgmyqtpnf efflgsdnll kttrtayati
      421 ktdaspksgy ngasfyiglg ikfgytvehp qnssyipgld dqgtgffkri fsvfskkr
//
LOCUS       WP_235207202              56 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma factor-like helix-turn-helix DNA-binding protein [Pedobacter
            sp. V48].
ACCESSION   WP_235207202
VERSION     WP_235207202.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter sp. V48
  ORGANISM  Pedobacter sp. V48
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
REFERENCE   1  (residues 1 to 56)
  AUTHORS   Campbell,E.A., Muzzin,O., Chlenov,M., Sun,J.L., Olson,C.A.,
            Weinman,O., Trester-Zedlitz,M.L. and Darst,S.A.
  TITLE     Structure of the bacterial RNA polymerase promoter specificity
            sigma subunit
  JOURNAL   Mol Cell 9 (3), 527-539 (2002)
   PUBMED   11931761
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019886.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08281.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..56
                     /organism="Pedobacter sp. V48"
                     /db_xref="taxon:509635"
     Protein         1..56
                     /product="sigma factor-like helix-turn-helix DNA-binding
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0016987 - sigma factor activity [Evidence
                     IEA]"
                     /GO_process="GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=6533
     Region          <1..49
                     /region_name="Sig70_bacteroi1"
                     /note="RNA polymerase sigma-70 factor, Bacteroides
                     expansion family 1; TIGR02985"
                     /db_xref="CDD:274376"
ORIGIN      
        1 mllsdlrqft esalahlppq qqlifrmcry qglsydeiae qvhlsrntvt ihwlqh
//
LOCUS       WP_235207216             138 aa            linear   BCT 02-MAR-2025
DEFINITION  RagB/SusD family nutrient uptake outer membrane protein [Pedobacter
            sp. V48].
ACCESSION   WP_235207216
VERSION     WP_235207216.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter sp. V48
  ORGANISM  Pedobacter sp. V48
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
REFERENCE   1  (residues 1 to 138)
  AUTHORS   Goulas,T., Garcia-Ferrer,I., Hutcherson,J.A., Potempa,B.A.,
            Potempa,J., Scott,D.A. and Gomis-Ruth,F.X.
  TITLE     Structure of RagB, a major immunodominant outer-membrane surface
            receptor antigen of Porphyromonas gingivalis
  JOURNAL   Mol Oral Microbiol 31 (6), 472-485 (2016)
   PUBMED   26441291
REFERENCE   2  (residues 1 to 138)
  AUTHORS   Bolam,D.N. and Koropatkin,N.M.
  TITLE     Glycan recognition by the Bacteroidetes Sus-like systems
  JOURNAL   Curr Opin Struct Biol 22 (5), 563-569 (2012)
   PUBMED   22819666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07980.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Pedobacter sp. V48"
                     /db_xref="taxon:509635"
     Protein         1..138
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /calculated_mol_wt=15600
     Region          <1..137
                     /region_name="SusD_RagB"
                     /note="SusD family; pfam07980"
                     /db_xref="CDD:429768"
ORIGIN      
        1 mfrlsemyln raeaeaklsn tgaalddvdl irknrglens lynkilpsgy saldvvleek
       61 riemafeghr aydiyrnkra mskaywgyhl aglketdidl sktptgyanl svnytnprvi
      121 yfvpidevls ntlatqnq
//
LOCUS       WP_235207230             445 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase [Pedobacter sp. V48].
ACCESSION   WP_235207230
VERSION     WP_235207230.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter sp. V48
  ORGANISM  Pedobacter sp. V48
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
REFERENCE   1  (residues 1 to 445)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Pedobacter sp. V48"
                     /db_xref="taxon:509635"
     Protein         1..445
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=50088
     Region          34..424
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
     Site            order(43,83,224,278..279)
                     /site_type="active"
                     /db_xref="CDD:293732"
     Site            order(43,83,224,279)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293732"
ORIGIN      
        1 mvsfimrkst llktlfsias ftlasfqnis aqqkpnivfv ltddmgyadl gcygnpviet
       61 pfldqmaakg ikatnfalas ptcspsraaf ltgryptryn ipaplgpgsd qglpaseltm
      121 aeilktggyk tnmigkwhlg dkkanlpmeq gfdnyyglly shdyrspyvq tdttiklyrn
      181 ykpevykpad ssltslynne aikyikkqkk gepfflylay nmphlpvyfa ahkknsdlth
      241 ggelgyvvne mdrglsqiwk tleqqgladn tififtsdng pwtnyperms gdgktrqnhv
      301 gyagifrgsk attyeggtrv pfilywkght qaqvqkqlfs svdllptlae wsgtklpdnl
      361 kidgqsvtpl ftkkdvpfqh qpvyyvhygv pevarigdwk lrrtkesgie lfnlaedpse
      421 rvnlnndype eskkllkild nypdk
//
LOCUS       WP_235207232             280 aa            linear   BCT 02-MAR-2025
DEFINITION  outer membrane beta-barrel protein [Pedobacter sp. V48].
ACCESSION   WP_235207232
VERSION     WP_235207232.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter sp. V48
  ORGANISM  Pedobacter sp. V48
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019268.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07642.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Pedobacter sp. V48"
                     /db_xref="taxon:509635"
     Protein         1..280
                     /product="outer membrane beta-barrel protein"
                     /calculated_mol_wt=29894
     Region          1..280
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 midlalkktt gkasfvgels fgprgqyqsi pngpddnsfh iqnlyvnyaf tdkfsmtagy
       61 mgtfigyevi spvanfnyst sylfgagpfq nagikgtyaf sekaslmvgl fndwnvyqdl
      121 ngvshigaql mvapvegwsa ylnflsgysa gaggtgtifd lttayqvtdk fklglnaady
      181 svsndnggyt gvalypqyaf ttavslglrg eyfnykgige lpdasvaait lsgnikaggl
      241 tfipevrfds dkdysqefvk ksgamaksas qfslaavyaf
//
LOCUS       WP_235207251             347 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Pedobacter sp. V48].
ACCESSION   WP_235207251
VERSION     WP_235207251.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter sp. V48
  ORGANISM  Pedobacter sp. V48
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
REFERENCE   1  (residues 1 to 347)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 347)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 347)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 347)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Pedobacter sp. V48"
                     /db_xref="taxon:509635"
     Protein         1..347
                     /product="ATP-binding protein"
                     /calculated_mol_wt=38623
     Region          <4..342
                     /region_name="PRK11091"
                     /note="aerobic respiration control sensor protein ArcB;
                     Provisional"
                     /db_xref="CDD:236842"
ORIGIN      
        1 mertnlteeq remislleis sssllgvind ildlskieag kfkinrtptd iinvcnsvin
       61 llrirakekk lslemeldpe lpahvladsl rlnqilmnli gnaikftsqg svtlrveiln
      121 skgnniqvkf svidtgigia seniekifet feqadeqttv kfggtglgls ivknlaklkg
      181 ghlevfseen rgstfcftnw yeivkealpi qkvakenftp fnnvkilvae dnpinkfliv
      241 kilkdwmida dvvengkdai nklrenhydl ilmdtfmpvl ngldairmir egyakgkeni
      301 piitfsaavm etdtktamda gandviskpf elatlhekit kyataty
//
LOCUS       WP_235207318             172 aa            linear   BCT 02-MAR-2025
DEFINITION  5' nucleotidase, NT5C type [Pedobacter sp. V48].
ACCESSION   WP_235207318
VERSION     WP_235207318.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter sp. V48
  ORGANISM  Pedobacter sp. V48
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Rampazzo,C., Kost-Alimova,M., Ruzzenente,B., Dumanski,J.P. and
            Bianchi,V.
  TITLE     Mouse cytosolic and mitochondrial deoxyribonucleotidases: cDNA
            cloning of the mitochondrial enzyme, gene structures, chromosomal
            mapping and comparison with the human orthologs
  JOURNAL   Gene 294 (1-2), 109-117 (2002)
   PUBMED   12234672
REFERENCE   2  (residues 1 to 172)
  AUTHORS   Rampazzo,C., Johansson,M., Gallinaro,L., Ferraro,P., Hellman,U.,
            Karlsson,A., Reichard,P. and Bianchi,V.
  TITLE     Mammalian 5'(3')-deoxyribonucleotidase, cDNA cloning, and
            overexpression of the enzyme in Escherichia coli and mammalian
            cells
  JOURNAL   J Biol Chem 275 (8), 5409-5415 (2000)
   PUBMED   10681516
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018627.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06941.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Pedobacter sp. V48"
                     /db_xref="taxon:509635"
     Protein         1..172
                     /product="5' nucleotidase, NT5C type"
                     /GO_function="GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009264 - deoxyribonucleotide catabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=20287
     Region          1..172
                     /region_name="YorC"
                     /note="5'(3')-deoxyribonucleotidase [Nucleotide transport
                     and metabolism]; COG4502"
                     /db_xref="CDD:443586"
ORIGIN      
        1 mriaidmdev ladpihkfih lynrdygipl dliiepgnev yqhmpehinn kwfdyinekg
       61 ffrdlplieg sveavkklqe hhdvyivsaa tefrnsledk ldwlaehfpf itwrnimfcg
      121 dkivdvdvmi ddraknfigf kgrkllfssp hnlllkdyer vdtwqqvldk ll
//
LOCUS       WP_235207329            1239 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Pedobacter sp. V48].
ACCESSION   WP_235207329
VERSION     WP_235207329.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter sp. V48
  ORGANISM  Pedobacter sp. V48
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
REFERENCE   1  (residues 1 to 1239)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 1239)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 1239)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 1239)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1239
                     /organism="Pedobacter sp. V48"
                     /db_xref="taxon:509635"
     Protein         1..1239
                     /product="ATP-binding protein"
                     /calculated_mol_wt=141970
     Region          220..>439
                     /region_name="DUF4153"
                     /note="Domain of unknown function (DUF4153); cl24047"
                     /db_xref="CDD:474134"
     Region          756..>1031
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
     Region          935..1239
                     /region_name="NtrY"
                     /note="Signal transduction histidine kinase NtrY involved
                     in nitrogen fixation and metabolism regulation [Signal
                     transduction mechanisms]; COG5000"
                     /db_xref="CDD:444024"
ORIGIN      
        1 msiggkirfl llilgacciv talslkhsit kkellaheag klqknlsine klvadflnda
       61 aqvekakqyh lndqyglnfi nkyrnkgini ltyqdnklkf wsynslvppd peaikegssf
      121 sqfangwfev ikkttgnytl iflievknqf siqnqylend fsrylsnnns lslatfidpe
      181 vqgisnldgk iifevklkst ysrsiygtie lwlwivglfs fclffnsfcg wlakrgnlvp
      241 atvlillffv tirvtdleyg wfnrqfnlpi fspkiyaesf flpslgdfll nviaitwvvl
      301 fvftyndkyk lpgwltrskl gglafhfill lifgalaflf dqvflgliin skinfditni
      361 inldgiswvs iivlclvwfn iylvanifmq qtlqlnvtnr ervilflaaf facliyklgt
      421 gfsiffiaya lfifiiswnf yirnnkfsia vfallffcla fissvkylrf idekehvnrf
      481 amaqklvssd dftvvsaien lertilankv vlnyfkdpdi nspielkksi ekeyierylp
      541 rfeynlyeyn nldssatgiq tiplsyfknl vkagsvkvpe snyfyrlndt fgyqnyfgii
      601 piyeenqilg tlvielksql ynykgqlpei lmdrsikned nyskysialy kdgrlegqsg
      661 nytyklssdg fatrnntvgf fkdslnyshl iyyptpskli viskedvsfi iqlatlsfff
      721 lvfilfsitl ytliwllkni deswsgwfni nrslminank ilyktriqfs ivlsvvatll
      781 ivgwityfyi rneyrrqqqd fikekvrkvq qsyeklilat gvpaptdrav tefnqfadin
      841 aaylnlfdtn glliftstpk mydlgiisrr maskaflhln qlqgsdyinp serisnfiys
      901 sayapirnaq nqtvayigmp yyaneadyqt rigvfintli niyalvfvai gilavflanq
      961 itspltfiqd sikktklgqk nqpigwsrhd eigslikeyn kmiaaleesa vklarseres
     1021 awremakqva heiknpltpl klgvqlleks wkekdpnfqk kferfsksfi eqidslstia
     1081 sefsnfakmp dtkleklqll piigqardvf rntqdaeiyi lnntnidvvv lgdkdqvlrt
     1141 fnnlfknaie aadvntvcii kvnisnnqer vfievedngk gidsslqdki fvpnfttkss
     1201 gtglglafvk qavenaggtv efksfgevgt tfylsfpls
//
LOCUS       WP_235207368             233 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Bordetella bronchiseptica].
ACCESSION   WP_235207368
VERSION     WP_235207368.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..233
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=23463
     Region          <29..203
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mfllafavie srsrdplmpm rlfgngslvv gmiltfifmg tfgalpyflt llfqnvqgys
       61 alqtglafiv pslaiffgtq lgarlanrls arstlvagfv tgiagtlala saafvgapya
      121 lilpglvvsg igqgivwtam wivaasgvah heqgiasgma sttlnvgnai giavlvayan
      181 rgigglhgda lraglaagaq hafylaaagl vlgllvslaf spragagarv gaa
//
LOCUS       WP_235207381             233 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Bordetella
            bronchiseptica].
ACCESSION   WP_235207381
VERSION     WP_235207381.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..>233
                     /product="Ig-like domain-containing protein"
     Region          <21..>233
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 msasdaagnr aaasaeftdq vdktaprapt lqlatdtatg rvtasgkaep gatveitwpd
       61 qtrvtvvadt sgaysatsaa dmpdgaitav aadragntga ptrqryidsv drtaptlgmp
      121 svstaadtgr vsvtgmtepg arvqveipge aprivtadaa grysvvsagd vlqsgtvrvt
      181 atdaygnasa pvhlpyqdqv dktapaspsl tvredaasgr atvtgqaepg aav
//
LOCUS       WP_235207671             202 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Pseudomonas aeruginosa].
ACCESSION   WP_235207671
VERSION     WP_235207671.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024573.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13175.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..202
                     /product="AAA family ATPase"
                     /calculated_mol_wt=22261
     Region          1..>45
                     /region_name="YbjD"
                     /note="Predicted ATP-dependent endonuclease of the OLD
                     family, contains P-loop ATPase and TOPRIM domains
                     [Replication, recombination and repair]; COG3593"
                     /db_xref="CDD:442812"
     Region          3..>117
                     /region_name="RecF"
                     /note="Recombinational DNA repair ATPase RecF
                     [Replication, recombination and repair]; COG1195"
                     /db_xref="CDD:440808"
ORIGIN      
        1 meitsieier fkrvqkaeiq lsdinvlvga nnagkssmlq gihfcagaav aarrldkttf
       61 tqqsllycpa rnfvdlrngd pyqnqsafgy lrvrgvvgnd ddqytvrvyr grnegnvgce
      121 rhgnpgigai vtafippfsv yvpglagipe veeyrsesvv rkgvasgdan lylrnvllli
      181 ktkklltelt qlmglifqkf ly
//
LOCUS       WP_235207687             177 aa            linear   BCT 02-MAR-2025
DEFINITION  Na+/H+ antiporter NhaA [Pseudomonas aeruginosa].
ACCESSION   WP_235207687
VERSION     WP_235207687.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 177)
  AUTHORS   Karpel,R., Alon,T., Glaser,G., Schuldiner,S. and Padan,E.
  TITLE     Expression of a sodium proton antiporter (NhaA) in Escherichia coli
            is induced by Na+ and Li+ ions
  JOURNAL   J Biol Chem 266 (32), 21753-21759 (1991)
   PUBMED   1657980
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06965.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..177
                     /product="Na+/H+ antiporter NhaA"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /GO_process="GO:0006885 - regulation of pH [Evidence IEA]"
                     /calculated_mol_wt=19059
     Region          19..>128
                     /region_name="Na_H_Exchanger"
                     /note="Sodium/hydrogen exchanger family; cl01133"
                     /db_xref="CDD:470090"
ORIGIN      
        1 mpdaslgess asirrrrvar ylhtesgaav llvivtvval awansplsda yfelwhldvg
       61 fdfgplglhm dlhhwvndgl mvvfffligl evrqefahgs lrdrsrarla lvagvagvvl
      121 palvyvlivg lagseglhgw ggggrhrygv hagypgdrrp aairsvarvl ahpdrgr
//
LOCUS       WP_235207542             112 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Pseudoalteromonas
            agarivorans].
ACCESSION   WP_235207542
VERSION     WP_235207542.1
KEYWORDS    RefSeq.
SOURCE      Pseudoalteromonas agarivorans
  ORGANISM  Pseudoalteromonas agarivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE   1  (residues 1 to 112)
  AUTHORS   Fujikawa,N., Kurumizaka,H., Nureki,O., Terada,T., Shirouzu,M.,
            Katayama,T. and Yokoyama,S.
  TITLE     Structural basis of replication origin recognition by the DnaA
            protein
  JOURNAL   Nucleic Acids Res 31 (8), 2077-2086 (2003)
   PUBMED   12682358
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019903.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08299.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Pseudoalteromonas agarivorans"
                     /db_xref="taxon:176102"
     Protein         1..112
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /GO_process="GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /calculated_mol_wt=12604
     Region          <25..111
                     /region_name="dnaA"
                     /note="chromosomal replication initiator protein DnaA;
                     cl42516"
                     /db_xref="CDD:455861"
ORIGIN      
        1 msvlgcedfi enikdyiaks dserklvrkk hsaddviayl akhfnvevdd ivtvkkgrke
       61 knlprwfaik lcqdltglnl qalaavfnve hysaiskavg rlnklmvede kv
//
LOCUS       WP_235207735             370 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF3080 family protein [unclassified Alteromonas].
ACCESSION   WP_235207735
VERSION     WP_235207735.1
KEYWORDS    RefSeq.
SOURCE      unclassified Alteromonas
  ORGANISM  unclassified Alteromonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Alteromonadaceae; Alteromonas/Salinimonas group;
            Alteromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022723.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11279.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="unclassified Alteromonas"
                     /db_xref="taxon:2614992"
     Protein         1..370
                     /product="DUF3080 family protein"
                     /calculated_mol_wt=41557
     Region          58..368
                     /region_name="DUF3080"
                     /note="Protein of unknown function (DUF3080); pfam11279"
                     /db_xref="CDD:431778"
ORIGIN      
        1 mmkfqrftfa mpftramlft rdlpytptfa pasryvfaai aiillsgcfg qetvkdsldn
       61 yqgrlsrvld tplpetvvkp lpkltdgsql kynieglsin lrefyaildc elgrvvaern
      121 tslgksqlps qrlvyeskll svfsacensl retdtkladt laawkeakea dytqswanli
      181 qtskelrlgl nsperllate nnkdalasin slyfldella paalsksids seleaqlkii
      241 lssrlpaslw qtqqtlattl pklteslapq lnaiacpegr asdtakilrn vfylffieei
      301 qpvgslvnny hyklmplwek wqdnpalhss fkryinqqan igfatysnam qehvsmwqqf
      361 lgrcnlspva
//
LOCUS       WP_235207738             317 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF3307 domain-containing protein [unclassified
            Alteromonas].
ACCESSION   WP_235207738
VERSION     WP_235207738.1
KEYWORDS    RefSeq.
SOURCE      unclassified Alteromonas
  ORGANISM  unclassified Alteromonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Alteromonadaceae; Alteromonas/Salinimonas group;
            Alteromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023178.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11750.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="unclassified Alteromonas"
                     /db_xref="taxon:2614992"
     Protein         1..317
                     /product="DUF3307 domain-containing protein"
                     /calculated_mol_wt=34191
     Region          39..182
                     /region_name="DUF3307"
                     /note="Protein of unknown function (DUF3307); pfam11750"
                     /db_xref="CDD:432048"
ORIGIN      
        1 meaigievls igvlsmggig aeqlqlqqla llagllvahv lgdfyfqptg wvksrntkhl
       61 lspalylhal lhgvlaffal lilslfatla tketgaaatg vsitgisttg lsassvtaie
      121 liplflvaig vtvthfiida iksytspttf afvidqaahi tvaiilwall tqqfapllqh
      181 iyainyqhlv lllayliils ptsivikqll spwtqeleel tnpkrtselv qlpvqrtlam
      241 agqrigyler lliltfvlln qfaaigflia aksifrfgdl tksedkklte yvllgtltsv
      301 vitiatglva kwcmgkl
//
LOCUS       WP_235207770             176 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GmrSD restriction endonuclease domain-containing
            protein [unclassified Alteromonas].
ACCESSION   WP_235207770
VERSION     WP_235207770.1
KEYWORDS    RefSeq.
SOURCE      unclassified Alteromonas
  ORGANISM  unclassified Alteromonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Alteromonadaceae; Alteromonas/Salinimonas group;
            Alteromonas.
REFERENCE   1  (residues 1 to 176)
  AUTHORS   Gao,H., Gong,X., Zhou,J., Zhang,Y., Duan,J., Wei,Y., Chen,L.,
            Deng,Z., Wang,J., Chen,S., Wu,G. and Wang,L.
  TITLE     Nicking mechanism underlying the DNA phosphorothioate-sensing
            antiphage defense by SspE
  JOURNAL   Nat Commun 13 (1), 6773 (2022)
   PUBMED   36351933
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 176)
  AUTHORS   Machnicka,M.A., Kaminska,K.H., Dunin-Horkawicz,S. and Bujnicki,J.M.
  TITLE     Phylogenomics and sequence-structure-function relationships in the
            GmrSD family of Type IV restriction enzymes
  JOURNAL   BMC Bioinformatics 16, 336 (2015)
   PUBMED   26493560
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019151.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07510.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="unclassified Alteromonas"
                     /db_xref="taxon:2614992"
     Protein         1..176
                     /product="GmrSD restriction endonuclease domain-containing
                     protein"
                     /calculated_mol_wt=20042
     Region          67..130
                     /region_name="HNHc"
                     /note="HNH nucleases; HNH endonuclease signature which is
                     found in viral, prokaryotic, and eukaryotic proteins. The
                     alignment includes members of the large group of homing
                     endonucleases, yeast intron 1 protein, MutS, as well as
                     bacterial colicins, pyocins, and...; cl00083"
                     /db_xref="CDD:469607"
ORIGIN      
        1 mnkalreavn enrdfvvlye rsdwphwsds dgdcqntrhe lllatslsgv efmstkecnv
       61 itgswhdpys getitdskal dldhivplkf ahghggasws ksrkkqfand vdnlllvkas
      121 lnrqkgakgp dewmppnhsf rcdylkkfnt vmdkyelryi pselrivgkm lkackr
//
LOCUS       WP_235207823             383 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MucB/RseB C-terminal domain-containing protein
            [unclassified Alteromonas].
ACCESSION   WP_235207823
VERSION     WP_235207823.1
KEYWORDS    RefSeq.
SOURCE      unclassified Alteromonas
  ORGANISM  unclassified Alteromonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Alteromonadaceae; Alteromonas/Salinimonas group;
            Alteromonas.
REFERENCE   1  (residues 1 to 383)
  AUTHORS   Kim,D.Y., Jin,K.S., Kwon,E., Ree,M. and Kim,K.K.
  TITLE     Crystal structure of RseB and a model of its binding mode to RseA
  JOURNAL   Proc Natl Acad Sci U S A 104 (21), 8779-8784 (2007)
   PUBMED   17496148
REFERENCE   2  (residues 1 to 383)
  AUTHORS   Martinez-Salazar,J.M., Moreno,S., Najera,R., Boucher,J.C.,
            Espin,G., Soberon-Chavez,G. and Deretic,V.
  TITLE     Characterization of the genes coding for the putative sigma factor
            AlgU and its regulators MucA, MucB, MucC, and MucD in Azotobacter
            vinelandii and evaluation of their roles in alginate biosynthesis
  JOURNAL   J Bacteriol 178 (7), 1800-1808 (1996)
   PUBMED   8606151
REFERENCE   3  (residues 1 to 383)
  AUTHORS   Martin,D.W., Schurr,M.J., Mudd,M.H. and Deretic,V.
  TITLE     Differentiation of Pseudomonas aeruginosa into the
            alginate-producing form: inactivation of mucB causes conversion to
            mucoidy
  JOURNAL   Mol Microbiol 9 (3), 497-506 (1993)
   PUBMED   8412698
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17188.9
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="unclassified Alteromonas"
                     /db_xref="taxon:2614992"
     Protein         1..383
                     /product="MucB/RseB C-terminal domain-containing protein"
                     /calculated_mol_wt=42301
     Region          86..379
                     /region_name="RseB"
                     /note="negative regulator of sigma E activity [Signal
                     transduction mechanisms]; COG3026"
                     /db_xref="CDD:442262"
ORIGIN      
        1 msvlkarkmr cnqfvllitg alsiftpfcv haqsrdsslp tslesnsles nnqaksates
       61 ateretktdt vkqtepaler etnalqtpaq wlqrlqslis sanyqvsfvq ttvgketvpy
      121 lwrhgvlddg teveqlnlqn gpgrelirvd givsvfepdt qpysirsrfi ngpipnillh
      181 npqkllesye fvlvgrarva grsaqqiriv srdntrfgyq lwldeesgml lklnmldlqg
      241 alleqiqisa fsvmaspspy farinpsslp epimmassqs rahgwevnyl pvgmkevkrd
      301 trrlaltgqv veykmysdgl vdvsvyvqpi edalggdial rnevstfltl kagkaqvtvl
      361 geiplqtaka iatsisavnn snd
//
LOCUS       WP_235207871             218 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: chalcone isomerase family protein [unclassified
            Alteromonas].
ACCESSION   WP_235207871
VERSION     WP_235207871.1
KEYWORDS    RefSeq.
SOURCE      unclassified Alteromonas
  ORGANISM  unclassified Alteromonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Alteromonadaceae; Alteromonas/Salinimonas group;
            Alteromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027363.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16036.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="unclassified Alteromonas"
                     /db_xref="taxon:2614992"
     Protein         1..218
                     /product="chalcone isomerase family protein"
                     /GO_function="GO:0016872 - intramolecular lyase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=24257
     Region          91..216
                     /region_name="Chalcone_3"
                     /note="Chalcone isomerase-like; cl03589"
                     /db_xref="CDD:446143"
ORIGIN      
        1 mkpklitkae lvcikhaisd ksqaeksslm gslanklrtv vkraaflslt mmsislmsvs
       61 ftshaalpsp vsesvpnaev vgkdmftyyl fdvyeatlfa pkgeyekgkp ialtlkyqrs
      121 ldgkkiaers idemkkqakl dsekakrwlq dmvdifpdvk egdvltgvan eegnalfyfn
      181 genagevkdp eftqkffdiw lgentsepkf rrallgik
//
LOCUS       WP_235207910             223 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Enterococcus
            faecalis].
ACCESSION   WP_235207910
VERSION     WP_235207910.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 223)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 223)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 223)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 223)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Enterococcus faecalis"
                     /db_xref="taxon:1351"
     Protein         1..223
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=24522
     Region          <5..177
                     /region_name="SunT"
                     /note="ABC-type bacteriocin/lantibiotic exporters, contain
                     an N-terminal double-glycine peptidase domain [Defense
                     mechanisms]; COG2274"
                     /db_xref="CDD:441875"
ORIGIN      
        1 mitlnqlssg vlltfnalla yvtnpilnla nlqsvlvqgk vaqeklynil esqidlygnk
       61 slvienddif infdlvsydy dsnskilkdi sinicgnnia lsgtngvgks tigkliarly
      121 ipdsgsiein gqnlidisee svskniiyvd greslfsssv sdniklgrni kdediydtls
      181 klkansifqn ldfenisdkq lslgqmqiik vlratlsakk iyf
//
LOCUS       WP_235207998              71 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphatase PAP2 family protein [Saccharicrinis fermentans].
ACCESSION   WP_235207998
VERSION     WP_235207998.1
KEYWORDS    RefSeq.
SOURCE      Saccharicrinis fermentans
  ORGANISM  Saccharicrinis fermentans
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia;
            Marinilabiliales; Marinilabiliaceae; Saccharicrinis.
REFERENCE   1  (residues 1 to 71)
  AUTHORS   Neuwald,A.F.
  TITLE     An unexpected structural relationship between integral membrane
            phosphatases and soluble haloperoxidases
  JOURNAL   Protein Sci 6 (8), 1764-1767 (1997)
   PUBMED   9260289
REFERENCE   2  (residues 1 to 71)
  AUTHORS   Stukey,J. and Carman,G.M.
  TITLE     Identification of a novel phosphatase sequence motif
  JOURNAL   Protein Sci 6 (2), 469-472 (1997)
   PUBMED   9041652
REFERENCE   3  (residues 1 to 71)
  AUTHORS   Messerschmidt,A. and Wever,R.
  TITLE     X-ray structure of a vanadium-containing enzyme: chloroperoxidase
            from the fungus Curvularia inaequalis
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 392-396 (1996)
   PUBMED   8552646
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013718.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01569.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Saccharicrinis fermentans"
                     /db_xref="taxon:982"
     Protein         1..71
                     /product="phosphatase PAP2 family protein"
                     /calculated_mol_wt=7981
     Region          <9..40
                     /region_name="PAP2_like"
                     /note="PAP2_like proteins, a super-family of histidine
                     phosphatases and vanadium haloperoxidases, includes type 2
                     phosphatidic acid phosphatase or lipid phosphate
                     phosphatase (LPP), Glucose-6-phosphatase,
                     Phosphatidylglycerophosphatase B and bacterial acid...;
                     cl00474"
                     /db_xref="CDD:469784"
ORIGIN      
        1 mvllwflllv gyyrvramkh fpsdvlvgta igatigvlvp hfhrrkkesn ftwtpvagsr
       61 mtgitarytf k
//
LOCUS       WP_235207945             930 aa            linear   BCT 02-MAR-2025
DEFINITION  SpoIIE family protein phosphatase [Saccharicrinis fermentans].
ACCESSION   WP_235207945
VERSION     WP_235207945.1
KEYWORDS    RefSeq.
SOURCE      Saccharicrinis fermentans
  ORGANISM  Saccharicrinis fermentans
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia;
            Marinilabiliales; Marinilabiliaceae; Saccharicrinis.
REFERENCE   1  (residues 1 to 930)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Saccharicrinis fermentans"
                     /db_xref="taxon:982"
     Protein         1..930
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=106838
     Region          46..>715
                     /region_name="COG3292"
                     /note="Periplasmic ligand-binding sensor domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:442521"
     Region          <629..929
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
ORIGIN      
        1 mgniwatvqn ngllkinkqk nvtpyfqadi fedklyysie svdpfnflmg tseglmhlkl
       61 nqnaeitsvh eignippaki ntivkrraie geywiatede gfylfrydeq takhyannnl
      121 cikfnieyen ildiyeekdg nlllatwgng viklfldaat qsftesfkft tenglnhdfi
      181 raiigdredn ywfatygggv svllsdyfih ydlesigfkq skaksvmath snlwigldng
      241 ilhtdpfcft dheyydkalg ipndeitgfe ydsdstfwva sfesglyfrk kgdlrfkkyp
      301 ytkgvsepki ndmaivnrdi llattsgfyr inpttpkttl lttenqlphn ninfvfiddq
      361 qqiwigpkss giclldstsi evhrlskspl dvsgmttdsk gnfwlstigk gvlkynqdtl
      421 maidisdglt knycydivcd kndrlwiahq pgistidlnt kqirtfgfke dmggdfydiw
      481 kdkeeniwfa ssngiikyfp drdkkntvpp kinlnkanvs ginyplnkpi qlpypynrry
      541 akfrfdftgi sfkdplgvsy qyklirndne esqwidlgtt nfkeyeflpd gkydlkiraf
      601 nadgvpnnnp lsirieiaep iwkkwwfylv lisllglify wiikirerkl rmqkealqre
      661 vnsqtivlre qkdeiqrknk ditasinyak riqssilppv nelknsfaqs fiffaprdiv
      721 sgdfywfskn knkfllccad ctghgvpgaf msmigttlln dinktekvqs padileklds
      781 nikvllqken senakdgmdi svieidvnth kvriasakrp vfvyinnels iyngtrrsig
      841 ddaltqkskf lnyeyncskg dsiylfsdgy tdqfggpkgk kimkvgvknl leeirkkpmd
      901 sqgkiikeyf nnwkgdleqi ddvlfmgikl
//
LOCUS       WP_235207942             399 aa            linear   BCT 02-MAR-2025
DEFINITION  LON peptidase substrate-binding domain-containing protein
            [Saccharicrinis fermentans].
ACCESSION   WP_235207942
VERSION     WP_235207942.1
KEYWORDS    RefSeq.
SOURCE      Saccharicrinis fermentans
  ORGANISM  Saccharicrinis fermentans
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia;
            Marinilabiliales; Marinilabiliaceae; Saccharicrinis.
REFERENCE   1  (residues 1 to 399)
  AUTHORS   Cha,S.S., An,Y.J., Lee,C.R., Lee,H.S., Kim,Y.G., Kim,S.J.,
            Kwon,K.K., De Donatis,G.M., Lee,J.H., Maurizi,M.R. and Kang,S.G.
  TITLE     Crystal structure of Lon protease: molecular architecture of gated
            entry to a sequestered degradation chamber
  JOURNAL   EMBO J 29 (20), 3520-3530 (2010)
   PUBMED   20834233
REFERENCE   2  (residues 1 to 399)
  AUTHORS   Bertonati,C., Punta,M., Fischer,M., Yachdav,G., Forouhar,F.,
            Zhou,W., Kuzin,A.P., Seetharaman,J., Abashidze,M., Ramelot,T.A.,
            Kennedy,M.A., Cort,J.R., Belachew,A., Hunt,J.F., Tong,L.,
            Montelione,G.T. and Rost,B.
  TITLE     Structural genomics reveals EVE as a new ASCH/PUA-related domain
  JOURNAL   Proteins 75 (3), 760-773 (2009)
   PUBMED   19191354
REFERENCE   3  (residues 1 to 399)
  AUTHORS   Li,M., Rasulova,F., Melnikov,E.E., Rotanova,T.V., Gustchina,A.,
            Maurizi,M.R. and Wlodawer,A.
  TITLE     Crystal structure of the N-terminal domain of E. coli Lon protease
  JOURNAL   Protein Sci 14 (11), 2895-2900 (2005)
   PUBMED   16199667
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014269.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02190.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Saccharicrinis fermentans"
                     /db_xref="taxon:982"
     Protein         1..399
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /calculated_mol_wt=45451
     Region          39..>391
                     /region_name="Lon"
                     /note="ATP-dependent Lon protease, bacterial type
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG0466"
                     /db_xref="CDD:440234"
ORIGIN      
        1 mneikisidn lglnedyesd aefipivsde degdvtdfem pdtmailplr ntvlfpgviv
       61 pislgreksm klvkevqrng gvfgavaqke vevedpkeed lykigtvakv ikvlempdgs
      121 tsaiiqgkvr fkveefvtte pylkakvsql qdvtpeddks rdyealvgsl kdlslriiky
      181 sanippeasf avknienssf linficsnte isvkdkqgll gidelrdrgm kllehltrev
      241 qllelkndiq skvkldidqq qreymlhqqm ktiqdelgss pieqevrelk ekakkkkwgk
      301 evselfykel dklerlnpat geysvqynyl qtlldipwne ytkdkfdmds aekildrdhf
      361 gldgvkeril ehlavlklrg dlkspiicly glrglekhl
//
LOCUS       WP_235208104             526 aa            linear   BCT 02-MAR-2025
DEFINITION  iron chelate uptake ABC transporter family permease subunit
            [Saccharicrinis fermentans].
ACCESSION   WP_235208104
VERSION     WP_235208104.1
KEYWORDS    RefSeq.
SOURCE      Saccharicrinis fermentans
  ORGANISM  Saccharicrinis fermentans
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia;
            Marinilabiliales; Marinilabiliaceae; Saccharicrinis.
REFERENCE   1  (residues 1 to 526)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013219.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01032.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Saccharicrinis fermentans"
                     /db_xref="taxon:982"
     Protein         1..526
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /calculated_mol_wt=57857
     Region          1..236
                     /region_name="ZnuC"
                     /note="ABC-type Mn2+/Zn2+ transport system, ATPase
                     component [Inorganic ion transport and metabolism];
                     COG1121"
                     /db_xref="CDD:440738"
     Region          260..511
                     /region_name="ZnuB"
                     /note="ABC-type Mn2+/Zn2+ transport system, permease
                     component [Inorganic ion transport and metabolism];
                     COG1108"
                     /db_xref="CDD:440725"
ORIGIN      
        1 maplislkdi yagyepnkpv lrevnlevnh ldfigiigpn gggkstllkv ilgllkplsg
       61 qltyhletpa sigylpqinl adksfpirvi dvvlsglmgk kgllkrytke eknkalellh
      121 fvnlqkhaqs aigelsggqm qrvylcraii ndpqvlilde pnnfvdkhfe gelydllqdl
      181 nkkmsillvs hdigtissfi ktiacvneel hyhlsnkind qvlqtyncpi elithgkvph
      241 rfctttnsyt mqellsifqy sfftnaiiag lltsilagia gtyivsrkiv fisggithas
      301 fggiglayfl glnpflgaav fgvlsalgie wstskanire dsaiailwsl gmaigiifvf
      361 ltpgytpnlm sflfgniltv tlsdiyymla ltilitacii ifyrpilyta fdaeyakttg
      421 lnvkfikyvt aamvaltivf siriagiilv lslftipqai aaifthdfkk miyysigfgf
      481 mgmilgligs yffnlpsgai iiftlvlvwv llkgsskimk stnhfs
//
LOCUS       WP_235208100             262 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleoside recognition domain-containing protein [Saccharicrinis
            fermentans].
ACCESSION   WP_235208100
VERSION     WP_235208100.1
KEYWORDS    RefSeq.
SOURCE      Saccharicrinis fermentans
  ORGANISM  Saccharicrinis fermentans
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia;
            Marinilabiliales; Marinilabiliaceae; Saccharicrinis.
REFERENCE   1  (residues 1 to 262)
  AUTHORS   Hantke,K.
  TITLE     Is the bacterial ferrous iron transporter FeoB a living fossil?
  JOURNAL   Trends Microbiol 11 (5), 192-195 (2003)
   PUBMED   12781516
REFERENCE   2  (residues 1 to 262)
  AUTHORS   Loewen,S.K., Ng,A.M., Yao,S.Y., Cass,C.E., Baldwin,S.A. and
            Young,J.D.
  TITLE     Identification of amino acid residues responsible for the
            pyrimidine and purine nucleoside specificities of human
            concentrative Na(+) nucleoside cotransporters hCNT1 and hCNT2
  JOURNAL   J Biol Chem 274 (35), 24475-24484 (1999)
   PUBMED   10455109
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019292.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07670.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Saccharicrinis fermentans"
                     /db_xref="taxon:982"
     Protein         1..262
                     /product="nucleoside recognition domain-containing
                     protein"
                     /calculated_mol_wt=28397
     Region          2..203
                     /region_name="SpmA"
                     /note="Spore maturation protein SpmA (function unknown)
                     [General function prediction only]; COG2715"
                     /db_xref="CDD:442028"
ORIGIN      
        1 mvlnyiwiaf fliafvvali rlvfwgdmev fpnlvnavng aaksgfeisl gltgvlslwl
       61 glmkigekgg mvqvisrlia plfnrlfptl pkghpafgtm imnlsanmlg ldnaatpmgl
      121 kameqlqken hdkesasnaq imflvlntsg ltlipisimv yraqydalnp advflpilla
      181 tffstlagll avsyvqkirl adpvvmaylg gmtllvlgti ygvslldkeq vkvisnvgsn
      241 vilftimilf vamatykksk cv
//
LOCUS       WP_235207847             259 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: type III pantothenate kinase [unclassified
            Alteromonas].
ACCESSION   WP_235207847
VERSION     WP_235207847.1
KEYWORDS    RefSeq.
SOURCE      unclassified Alteromonas
  ORGANISM  unclassified Alteromonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Alteromonadaceae; Alteromonas/Salinimonas group;
            Alteromonas.
REFERENCE   1  (residues 1 to 259)
  AUTHORS   Yang,K., Eyobo,Y., Brand,L.A., Martynowski,D., Tomchick,D.,
            Strauss,E. and Zhang,H.
  TITLE     Crystal structure of a type III pantothenate kinase: insight into
            the mechanism of an essential coenzyme A biosynthetic enzyme
            universally distributed in bacteria
  JOURNAL   J Bacteriol 188 (15), 5532-5540 (2006)
   PUBMED   16855243
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015280.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03309.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="unclassified Alteromonas"
                     /db_xref="taxon:2614992"
     Protein         1..259
                     /product="type III pantothenate kinase"
                     /EC_number="2.7.1.33"
                     /GO_function="GO:0004594 - pantothenate kinase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=28385
     Region          19..253
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mvtdsipsek navaseqnvl lvdigntrik ysllcndkee pqsvssiael fkfidsyeki
       61 shiylasvrn nevskeintl clprkinfie khteksafdi knsyenvqkm gvdrwlamvc
      121 aaektkkaff vmdvgtaitv dfvvngqhlg gwivpgfnvm rdalvastkk vsandeipts
      181 fgvgtdteec vatgchaavy gvylsaidyi sskqtdfdii lgggdkkvfa flesavnirp
      241 ahlvvqglar yarkelssi
//
LOCUS       WP_235207938              77 aa            linear   BCT 02-MAR-2025
DEFINITION  fibronectin type III-like domain-contianing protein [Saccharicrinis
            fermentans].
ACCESSION   WP_235207938
VERSION     WP_235207938.1
KEYWORDS    RefSeq.
SOURCE      Saccharicrinis fermentans
  ORGANISM  Saccharicrinis fermentans
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia;
            Marinilabiliales; Marinilabiliaceae; Saccharicrinis.
REFERENCE   1  (residues 1 to 77)
  AUTHORS   Pozzo,T., Pasten,J.L., Karlsson,E.N. and Logan,D.T.
  TITLE     Structural and functional analyses of beta-glucosidase 3B from
            Thermotoga neapolitana: a thermostable three-domain representative
            of glycoside hydrolase 3
  JOURNAL   J Mol Biol 397 (3), 724-739 (2010)
   PUBMED   20138890
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025668.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14310.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Saccharicrinis fermentans"
                     /db_xref="taxon:982"
     Protein         1..77
                     /product="fibronectin type III-like domain-contianing
                     protein"
                     /calculated_mol_wt=8654
     Region          1..66
                     /region_name="Fn3-like"
                     /note="Fibronectin type III-like domain; pfam14310"
                     /db_xref="CDD:433860"
ORIGIN      
        1 mylqdeyasv lqpirsligf kkvtlmpgdt etlrfmiqpe dmsftgvnmq rqieagrfnv
       61 fvggssdtkq mlsyvlk
//
LOCUS       WP_235208147             200 aa            linear   BCT 02-MAR-2025
DEFINITION  nitroreductase family protein [Saccharicrinis fermentans].
ACCESSION   WP_235208147
VERSION     WP_235208147.1
KEYWORDS    RefSeq.
SOURCE      Saccharicrinis fermentans
  ORGANISM  Saccharicrinis fermentans
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia;
            Marinilabiliales; Marinilabiliaceae; Saccharicrinis.
REFERENCE   1  (residues 1 to 200)
  AUTHORS   de Oliveira,I.M., Henriques,J.A. and Bonatto,D.
  TITLE     In silico identification of a new group of specific bacterial and
            fungal nitroreductases-like proteins
  JOURNAL   Biochem Biophys Res Commun 355 (4), 919-925 (2007)
   PUBMED   17331467
REFERENCE   2  (residues 1 to 200)
  AUTHORS   Hecht,H.J., Erdmann,H., Park,H.J., Sprinzl,M. and Schmid,R.D.
  TITLE     Crystal structure of NADH oxidase from Thermus thermophilus
  JOURNAL   Nat Struct Biol 2 (12), 1109-1114 (1995)
   PUBMED   8846223
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013077.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00881.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Saccharicrinis fermentans"
                     /db_xref="taxon:982"
     Protein         1..200
                     /product="nitroreductase family protein"
                     /calculated_mol_wt=23047
     Region          32..177
                     /region_name="nitroreductase"
                     /note="nitroreductase family protein; cd20609"
                     /db_xref="CDD:380330"
     Site            order(37,39,57,59..60,62,65..66,68,70,72,74..79,127,
                     129..130,133..134,137..138,150..151,161)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:380330"
     Site            order(39,41,43,69,150..151)
                     /site_type="other"
                     /note="FMN binding site [chemical binding]"
                     /db_xref="CDD:380330"
ORIGIN      
        1 mkiilmleky kedliyckii sdgsktkiim hfkeliksry avrtyhenkv nptlikqvvn
       61 agrlapsaan rqpwkfiavd ddeilnkiha ayprewfakv pnliivygnh eeswkrsfdg
      121 kdhcdidtai aidhmtlaat elglgtcwvc hfnpqliqev iqnepywepm ailtigypve
      181 lkaphkkrkt ieevlsfngw
//
LOCUS       WP_235208169             195 aa            linear   BCT 02-MAR-2025
DEFINITION  CBS domain-containing protein [Saccharicrinis fermentans].
ACCESSION   WP_235208169
VERSION     WP_235208169.1
KEYWORDS    RefSeq.
SOURCE      Saccharicrinis fermentans
  ORGANISM  Saccharicrinis fermentans
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia;
            Marinilabiliales; Marinilabiliaceae; Saccharicrinis.
REFERENCE   1  (residues 1 to 195)
  AUTHORS   Scott,J.W., Hawley,S.A., Green,K.A., Anis,M., Stewart,G.,
            Scullion,G.A., Norman,D.G. and Hardie,D.G.
  TITLE     CBS domains form energy-sensing modules whose binding of adenosine
            ligands is disrupted by disease mutations
  JOURNAL   J Clin Invest 113 (2), 274-284 (2004)
   PUBMED   14722619
REFERENCE   2  (residues 1 to 195)
  AUTHORS   Kemp,B.E.
  TITLE     Bateman domains and adenosine derivatives form a binding contract
  JOURNAL   J Clin Invest 113 (2), 182-184 (2004)
   PUBMED   14722609
REFERENCE   3  (residues 1 to 195)
  AUTHORS   Janosik,M., Kery,V., Gaustadnes,M., Maclean,K.N. and Kraus,J.P.
  TITLE     Regulation of human cystathionine beta-synthase by
            S-adenosyl-L-methionine: evidence for two catalytically active
            conformations involving an autoinhibitory domain in the C-terminal
            region
  JOURNAL   Biochemistry 40 (35), 10625-10633 (2001)
   PUBMED   11524006
REFERENCE   4  (residues 1 to 195)
  AUTHORS   Zhang,R., Evans,G., Rotella,F.J., Westbrook,E.M., Beno,D.,
            Huberman,E., Joachimiak,A. and Collart,F.R.
  TITLE     Characteristics and crystal structure of bacterial
            inosine-5'-monophosphate dehydrogenase
  JOURNAL   Biochemistry 38 (15), 4691-4700 (1999)
   PUBMED   10200156
REFERENCE   5  (residues 1 to 195)
  AUTHORS   Ponting,C.P.
  TITLE     CBS domains in CIC chloride channels implicated in myotonia and
            nephrolithiasis (kidney stones)
  JOURNAL   J Mol Med (Berl) 75 (3), 160-163 (1997)
   PUBMED   9106071
REFERENCE   6  (residues 1 to 195)
  AUTHORS   Bateman,A.
  TITLE     The structure of a domain common to archaebacteria and the
            homocystinuria disease protein
  JOURNAL   Trends Biochem Sci 22 (1), 12-13 (1997)
   PUBMED   9020585
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012780.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00571.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Saccharicrinis fermentans"
                     /db_xref="taxon:982"
     Protein         1..195
                     /product="CBS domain-containing protein"
                     /calculated_mol_wt=21931
     Region          1..88
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
     Site            order(8,19,24..25,28,46,68..70,85)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:341358"
     Region          46..88
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
     Region          48..>130
                     /region_name="COG3448"
                     /note="CBS-domain-containing membrane protein [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:442671"
ORIGIN      
        1 mevfrvshlp ivnnkellgl vtdtdiydin kpeeplgnlp lsltapfvtq dqhiyaviev
       61 asrlqltvvp vlsdkneylg litqtdllkn fadliavhtp ggiveidvps ydysiseiar
      121 iiedsdtkvl sfylnqnkas dtlkitikln reditpvlra fdrydytvsa sysehntvde
      181 vtkknydali rylni
//
LOCUS       WP_235208170             271 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Saccharicrinis fermentans].
ACCESSION   WP_235208170
VERSION     WP_235208170.1
KEYWORDS    RefSeq.
SOURCE      Saccharicrinis fermentans
  ORGANISM  Saccharicrinis fermentans
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia;
            Marinilabiliales; Marinilabiliaceae; Saccharicrinis.
REFERENCE   1  (residues 1 to 271)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Saccharicrinis fermentans"
                     /db_xref="taxon:982"
     Protein         1..271
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=30639
     Region          3..271
                     /region_name="PRK10673"
                     /note="esterase"
                     /db_xref="CDD:182637"
ORIGIN      
        1 mmmqlffrel gqgsrnliii hglygssdnw ltiarllgde frifiidqrn hgqsphcdem
       61 sytlmaddik hfmlqqnldk aivmghsmgg ktamafalqn pnlveklvil diapksyggf
      121 snyaqitndh raivdallsi dpsqhhsrss vdkalkdkip nnmvrsfllk nigraddkql
      181 ywklnikais dnltkimdgl defdaaeefp aekavilirg aqspyvqded mqqvrkyfps
      241 aqladipdag hwlhaeqpdi fiktvkyfld s
//
LOCUS       WP_235208172              78 aa            linear   BCT 02-MAR-2025
DEFINITION  iron-sulfur cluster assembly protein [Saccharicrinis fermentans].
ACCESSION   WP_235208172
VERSION     WP_235208172.1
KEYWORDS    RefSeq.
SOURCE      Saccharicrinis fermentans
  ORGANISM  Saccharicrinis fermentans
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia;
            Marinilabiliales; Marinilabiliaceae; Saccharicrinis.
REFERENCE   1  (residues 1 to 78)
  AUTHORS   Mashruwala,A.A., Bhatt,S., Poudel,S., Boyd,E.S. and Boyd,J.M.
  TITLE     The DUF59 Containing Protein SufT Is Involved in the Maturation of
            Iron-Sulfur (FeS) Proteins during Conditions of High FeS Cofactor
            Demand in Staphylococcus aureus
  JOURNAL   PLoS Genet 12 (8), e1006233 (2016)
   PUBMED   27517714
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 78)
  AUTHORS   Schwenkert,S., Netz,D.J., Frazzon,J., Pierik,A.J., Bill,E.,
            Gross,J., Lill,R. and Meurer,J.
  TITLE     Chloroplast HCF101 is a scaffold protein for [4Fe-4S] cluster
            assembly
  JOURNAL   Biochem J 425 (1), 207-214 (2009)
   PUBMED   19817716
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 78)
  AUTHORS   Almeida,M.S., Herrmann,T., Peti,W., Wilson,I.A. and Wuthrich,K.
  TITLE     NMR structure of the conserved hypothetical protein TM0487 from
            Thermotoga maritima: implications for 216 homologous DUF59 proteins
  JOURNAL   Protein Sci 14 (11), 2880-2886 (2005)
   PUBMED   16199668
REFERENCE   4  (residues 1 to 78)
  AUTHORS   Ferrandez,A., Minambres,B., Garcia,B., Olivera,E.R., Luengo,J.M.,
            Garcia,J.L. and Diaz,E.
  TITLE     Catabolism of phenylacetic acid in Escherichia coli.
            Characterization of a new aerobic hybrid pathway
  JOURNAL   J Biol Chem 273 (40), 25974-25986 (1998)
   PUBMED   9748275
REFERENCE   5  (residues 1 to 78)
  AUTHORS   Olivera,E.R., Minambres,B., Garcia,B., Muniz,C., Moreno,M.A.,
            Ferrandez,A., Diaz,E., Garcia,J.L. and Luengo,J.M.
  TITLE     Molecular characterization of the phenylacetic acid catabolic
            pathway in Pseudomonas putida U: the phenylacetyl-CoA catabolon
  JOURNAL   Proc Natl Acad Sci U S A 95 (11), 6419-6424 (1998)
   PUBMED   9600981
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013999.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01883.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Saccharicrinis fermentans"
                     /db_xref="taxon:982"
     Protein         1..78
                     /product="iron-sulfur cluster assembly protein"
                     /calculated_mol_wt=8593
     Region          9..>77
                     /region_name="COG5133"
                     /note="Uncharacterized conserved protein [Function
                     unknown]; cl00941"
                     /db_xref="CDD:470001"
ORIGIN      
        1 mnneflskee eivntlktif dpeipvniyd lgliyevnvn degkanivmt ltspncpvae
       61 smpeevfdkv sdidgism
//
LOCUS       WP_235208216              81 aa            linear   BCT 02-MAR-2025
DEFINITION  EF-Tu/IF-2/RF-3 family GTPase [Saccharicrinis fermentans].
ACCESSION   WP_235208216
VERSION     WP_235208216.1
KEYWORDS    RefSeq.
SOURCE      Saccharicrinis fermentans
  ORGANISM  Saccharicrinis fermentans
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia;
            Marinilabiliales; Marinilabiliaceae; Saccharicrinis.
REFERENCE   1  (residues 1 to 81)
  AUTHORS   Nissen,P., Kjeldgaard,M., Thirup,S., Polekhina,G., Reshetnikova,L.,
            Clark,B.F. and Nyborg,J.
  TITLE     Crystal structure of the ternary complex of Phe-tRNAPhe, EF-Tu, and
            a GTP analog
  JOURNAL   Science 270 (5241), 1464-1472 (1995)
   PUBMED   7491491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03144.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Saccharicrinis fermentans"
                     /db_xref="taxon:982"
     Protein         1..81
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
                     /calculated_mol_wt=8867
     Region          <2..81
                     /region_name="InfB"
                     /note="Translation initiation factor IF-2, a GTPase
                     [Translation, ribosomal structure and biogenesis];
                     COG0532"
                     /db_xref="CDD:440298"
ORIGIN      
        1 mgtiagcmvk egkikrnskv rlirdgiviy tgdlaalkrf kddvkevasg yecgvsitny
       61 ndikegdlie afeevevsrk l
//
LOCUS       WP_235208229             368 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor plug domain-containing protein, partial
            [Saccharicrinis fermentans].
ACCESSION   WP_235208229
VERSION     WP_235208229.1
KEYWORDS    RefSeq.
SOURCE      Saccharicrinis fermentans
  ORGANISM  Saccharicrinis fermentans
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia;
            Marinilabiliales; Marinilabiliaceae; Saccharicrinis.
REFERENCE   1  (residues 1 to 368)
  AUTHORS   Oke,M., Sarra,R., Ghirlando,R., Farnaud,S., Gorringe,A.R.,
            Evans,R.W. and Buchanan,S.K.
  TITLE     The plug domain of a neisserial TonB-dependent transporter retains
            structural integrity in the absence of its transmembrane
            beta-barrel
  JOURNAL   FEBS Lett 564 (3), 294-300 (2004)
   PUBMED   15111112
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07715.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Saccharicrinis fermentans"
                     /db_xref="taxon:982"
     Protein         <1..368
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
     Region          66..>358
                     /region_name="OMP_RagA_SusC"
                     /note="TonB-linked outer membrane protein, SusC/RagA
                     family; TIGR04056"
                     /db_xref="CDD:274948"
ORIGIN      
        1 ikisnlktmk mklnktlike vlycgvlstl llfpsrlsaq kanvtqndve vfeirknkld
       61 nlgaasisqv dheeienvns idpsnsffgl lnglqvyqnn gfagqrsasl lirgrsslqd
      121 nsilvlvdgf errlddlttm diekvqvlkd aaavaiygqr gangvllvtt krggregmnv
      181 nvkydvgvsq afrmpdmlna adyaravnea lyydglpmky taheiaayee gnayslypnv
      241 dwanellnks gtvsnlnvef dgggknvkyy vgishqgekg llshdrseed iytaleydrl
      301 gfrsnldidl tkstllrlni ggnivqntrg gkspddifge iygtpsaamp vktangiwev
      361 qifiviip
//
LOCUS       WP_235208301             417 aa            linear   BCT 02-MAR-2025
DEFINITION  RagB/SusD family nutrient uptake outer membrane protein
            [Saccharicrinis fermentans].
ACCESSION   WP_235208301
VERSION     WP_235208301.1
KEYWORDS    RefSeq.
SOURCE      Saccharicrinis fermentans
  ORGANISM  Saccharicrinis fermentans
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia;
            Marinilabiliales; Marinilabiliaceae; Saccharicrinis.
REFERENCE   1  (residues 1 to 417)
  AUTHORS   Larsbrink,J., Rogers,T.E., Hemsworth,G.R., McKee,L.S., Tauzin,A.S.,
            Spadiut,O., Klinter,S., Pudlo,N.A., Urs,K., Koropatkin,N.M.,
            Creagh,A.L., Haynes,C.A., Kelly,A.G., Cederholm,S.N., Davies,G.J.,
            Martens,E.C. and Brumer,H.
  TITLE     A discrete genetic locus confers xyloglucan metabolism in select
            human gut Bacteroidetes
  JOURNAL   Nature 506 (7489), 498-502 (2014)
   PUBMED   24463512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025680.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14322.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Saccharicrinis fermentans"
                     /db_xref="taxon:982"
     Protein         1..417
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /calculated_mol_wt=47452
     Region          84..224
                     /region_name="SusD"
                     /note="starch binding outer membrane protein SusD;
                     cl21747"
                     /db_xref="CDD:451378"
ORIGIN      
        1 mkniyktflf cgilalmavl yscedyldrd pesiiseeva fknftnfqgf ieeiyncips
       61 kqkyywvtsy nwgddeifnv tsdansmmcn qidqgnfwaw qnsehswlda sradptsndk
      121 fdhrlwshaw ycirkanmgl enldrlteat deekkliegq lyffrawwhf elmqffgglp
      181 yvdevlssta slelprlsfq ecadkagadf kkaadllpid wdktsagans tgknqlrink
      241 imalgylgkn ylwvgsplvk ngaqvggant ynydvdycsk aadalgqlln lvesaqsqye
      301 lagfdyediy nhkkagdgys ysdifytrgq sflmpgaaea ifrgpvwssn gsawnflktw
      361 gpkvnglveh dniihhptan yvhnygmang lplddpesgy dpnypfkdrd prfimis
//
LOCUS       WP_235208343             478 aa            linear   BCT 02-MAR-2025
DEFINITION  dipeptidyl-peptidase 3 family protein [Saccharicrinis fermentans].
ACCESSION   WP_235208343
VERSION     WP_235208343.1
KEYWORDS    RefSeq.
SOURCE      Saccharicrinis fermentans
  ORGANISM  Saccharicrinis fermentans
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia;
            Marinilabiliales; Marinilabiliaceae; Saccharicrinis.
REFERENCE   1  (residues 1 to 478)
  AUTHORS   Xu,T., Xie,C., Yao,D., Zhou,C.Z. and Liu,J.
  TITLE     Crystal structures of Aflatoxin-oxidase from Armillariella
            tabescens reveal a dual activity enzyme
  JOURNAL   Biochem Biophys Res Commun 494 (3-4), 621-625 (2017)
   PUBMED   29050944
REFERENCE   2  (residues 1 to 478)
  AUTHORS   Mazzocco,C., Gillibert-Duplantier,J., Neaud,V., Fukasawa,K.M.,
            Claverol,S., Bonneu,M. and Puiroux,J.
  TITLE     Identification and characterization of two dipeptidyl-peptidase III
            isoforms in Drosophila melanogaster
  JOURNAL   FEBS J 273 (5), 1056-1064 (2006)
   PUBMED   16478478
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03571.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Saccharicrinis fermentans"
                     /db_xref="taxon:982"
     Protein         1..478
                     /product="dipeptidyl-peptidase 3 family protein"
                     /calculated_mol_wt=53800
     Region          <1..468
                     /region_name="PLN02791"
                     /note="Nudix hydrolase homolog"
                     /db_xref="CDD:215425"
ORIGIN      
        1 mddlfwqqaw gdkqalmsrv ddpyvkkyle inygpwerln gnssfiegig kkpagaqfyp
       61 hdmtkeefea ledeaknsqy tiierdgegk lkvipyhvay agalkkaadl lkqaavlaed
      121 dgfkdylekr akallnseyf esdlawmsmk nnqidfvvgp ienyedallg aktsfeayil
      181 ikdmewsekl ahfasllpkl qkelpvdaky kaeipgcdsd lgaydvvyyg gdcnagskti
      241 ainlpndpkv hlqkgsrkiq lknsmrakfd killpisell ivdeqqnnvt fdaffentmf
      301 hevahglgik ntlngsgtvr ealketstai eegkadilgl ymvdmltqmn elgedqvlmd
      361 nyvtfmaglf rsirfgasss hgkanmirfn yfkdkgaftk deasgkykvd fdkmriamie
      421 lsreilvlqg dgdyakaqkm iqelgfiqpe lqadldkiae agiprdivfe qgvkmlqw
//
LOCUS       WP_235208401            1090 aa            linear   BCT 02-MAR-2025
DEFINITION  tape measure protein [Pseudomonas aeruginosa].
ACCESSION   WP_235208401
VERSION     WP_235208401.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040129.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20155.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..1090
                     /product="tape measure protein"
                     /calculated_mol_wt=116191
     Region          <28..>195
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          175..866
                     /region_name="HI1514"
                     /note="Phage tail tape-measure protein, controls tail
                     length [Mobilome: prophages, transposons]; COG3941"
                     /db_xref="CDD:443141"
     Region          <926..>1032
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
ORIGIN      
        1 maspmqrliq fvlrgrdels paaqqsteal eglrttaanl nrqlddakga rglvtalgtt
       61 eraiaqtqts vqrvdrtiad lrealdrnpg srglavslqi aerdaaglrr tldqltarha
      121 eqqraaraag vdtgqlanee rrlasvvdnt resiaqnsre ireleraqmr aareaaghts
      181 rvtalreams sgvrqaaaya aafvgiqaal nlvrrgiglv rdgivsmltt gdqfenlqnr
      241 ltslmgsvae geratawikt fakdtplqlg dvtdafallk aygldpmdgs lkaiedqsek
      301 lgggmerleg ittavgqawa kqklqteeil qlvergvpvw dmlakvtgkn aaqlqdlask
      361 gklgrdvika lvdemgrsse gaaakamstl tglvsnlgdt aadflnrian agaldhvknk
      421 lkelgdtiaq mdqdgrldtl akglsdafvq gsewverfik rladvdfgtl idktsawlss
      481 fstqlddmas rvqlfiapfr tlfngvtsgi saialawtgt lslmvagiek vaekipaalg
      541 gerirssvag vhdvlssmse gfrqqiqqda qdiadawdts ttatasaaqq qsqaitdtft
      601 dlkagaksaa aesvqavtsl qnaldqisaa ktteqltalq gemlkayqag tlsqqeyang
      661 agvlnaklte lkstasgaal gvsdlstgle nlkqvqdais sakttvdiqn irtalsrlyn
      721 dgtisarefn qeqtklsakv kelkasgeeg akgmqavaes sdkaakslse qrkaigesme
      781 atrkgvastk ddmgafegff ggvlstarqg vaqlsqealn afdamrgist vdlsidtssl
      841 datsrslakv seqlarikae sgvgmsgfgr wamdtqrasl eiqaayleqk rslqslmddy
      901 ergtmklgdf vsaakgarng lsllndsdmr qlesaieaan qkiqqlkegs kstlvslree
      961 laglrgeqea vdrsrfnsrk aelqqqlaea qgsgdmnavq nlmtalatlq qiqaetdakr
     1021 qreeqqkrvd eqnaakaaaa ppasspassp pprvvrfetp rgavdvavas eqdetnllgv
     1081 leqasmrtgr
//
LOCUS       WP_235208406              58 aa            linear   BCT 02-MAR-2025
DEFINITION  HNH endonuclease [Pseudomonas aeruginosa].
ACCESSION   WP_235208406
VERSION     WP_235208406.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 58)
  AUTHORS   Zhang,L., Huang,Y., Xu,D., Yang,L., Qian,K., Chang,G., Gong,Y.,
            Zhou,X. and Ma,K.
  TITLE     Biochemical characterization of a thermostable HNH endonuclease
            from deep-sea thermophilic bacteriophage GVE2
  JOURNAL   Appl Microbiol Biotechnol 100 (18), 8003-8012 (2016)
   PUBMED   27131500
REFERENCE   2  (residues 1 to 58)
  AUTHORS   Dalgaard,J.Z., Klar,A.J., Moser,M.J., Holley,W.R., Chatterjee,A.
            and Mian,I.S.
  TITLE     Statistical modeling and analysis of the LAGLIDADG family of
            site-specific endonucleases and identification of an intein that
            encodes a site-specific endonuclease of the HNH family
  JOURNAL   Nucleic Acids Res 25 (22), 4626-4638 (1997)
   PUBMED   9358175
REFERENCE   3  (residues 1 to 58)
  AUTHORS   Shub,D.A., Goodrich-Blair,H. and Eddy,S.R.
  TITLE     Amino acid sequence motif of group I intron endonucleases is
            conserved in open reading frames of group II introns
  JOURNAL   Trends Biochem Sci 19 (10), 402-404 (1994)
   PUBMED   7817395
REFERENCE   4  (residues 1 to 58)
  AUTHORS   Gorbalenya,A.E.
  TITLE     Self-splicing group I and group II introns encode homologous
            (putative) DNA endonucleases of a new family
  JOURNAL   Protein Sci 3 (7), 1117-1120 (1994)
   PUBMED   7920259
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013964.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01844.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..58
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..58
                     /product="HNH endonuclease"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=6563
     Region          <2..55
                     /region_name="COG3183"
                     /note="Predicted restriction endonuclease, HNH family
                     [Defense mechanisms]"
                     /db_xref="CDD:442416"
ORIGIN      
        1 mievhhirpl htlepnpktr lddltllcan chrvvhasrh wlslaelksv legarehv
//
LOCUS       WP_235208415             135 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6392 family protein [Pectobacterium brasiliense].
ACCESSION   WP_235208415
VERSION     WP_235208415.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium brasiliense
  ORGANISM  Pectobacterium brasiliense
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040077.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19929.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Pectobacterium brasiliense"
                     /db_xref="taxon:180957"
     Protein         1..135
                     /product="DUF6392 family protein"
                     /calculated_mol_wt=15629
     Region          2..131
                     /region_name="DUF6392"
                     /note="Family of unknown function (DUF6392); pfam19929"
                     /db_xref="CDD:437761"
ORIGIN      
        1 mhdsgllpyk kppsatsgdp nlslvmakeg vhlsfkrddl tfqemtlriq ykkikiwifp
       61 nefplqknms hqwihenige pensitpkvi mkqeicwiek lsiigihipi tmqirydmhe
      121 magtvtyppt sarrw
//
LOCUS       WP_235208448            1119 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Pectobacterium
            brasiliense].
ACCESSION   WP_235208448
VERSION     WP_235208448.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium brasiliense
  ORGANISM  Pectobacterium brasiliense
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..1119
                     /organism="Pectobacterium brasiliense"
                     /db_xref="taxon:180957"
     Protein         1..>1119
                     /product="DUF6531 domain-containing protein"
     Region          <207..271
                     /region_name="FIX_Ntox15_NUC_DUF4112_RhsA-like"
                     /note="Found in type sIX effector (FIX) domain of unknown
                     function co-occurring with Ntox15, endonuclease, or RHS
                     repeat domain; cd20746"
                     /db_xref="CDD:410944"
     Region          578..>1119
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
ORIGIN      
        1 msqdkssala asgdaakrnf atdnkisggc ttcgceilvy yhydsgdpip napfqltdsr
       61 dhkiegktdd ngmffihdmg cgtfellvge gsdtfepqet vknnpvfqsn peymalsgey
      121 fslfiilrek gfleysaaqk avvsklrfwe svpdeykpal krfqklemii rrdngplkqe
      181 irriqhrlsa evaskaasid davllfcevi lgcipvvgqa mdvyflgewc wdsykkpelm
      241 ednmhridgv lcvigfvpga gdalkisgna itkamrkfkg nktqdieeat riirslsngd
      301 vvkwltairg dirkyaqdgk allitmkqal dllvtgasgg rswivalmad tfqllvnvlg
      361 llielfdsvv glieaefaaf ipkimtqiia sslpkgscdl samtmdvqkg asgdyrtdee
      421 idehtkrasa sdgslgimat vlaatmalgr ggghnkgklg vsetgaaggk snstgsthas
      481 qtahtsseqs hstspetpqs akpqseassd qkpqqkseev tskdkgtpqd dketialpkg
      541 tqpitpgaah pskpgddgaa qkkaqeqned tksdpkngkq ngdpvdmatg avvelrtdiq
      601 vssplplslq ryyrstgkrh sgllgtvwrs nwdisltlnd gvatltdgef nqafftlpne
      661 gafsrspsnp qwrltrqqge lvlhhvgglr yrfeyalglq lcltsiddaa ghrvafewvl
      721 gelhwvtlsd grlihvtseh qrittltlct pqrqrlktla sysyddrghl lsvradegrn
      781 fdyryspegw llrwsdlgst wvehdydkkg rairdrtseg ywpghfeydd dtltshyhsg
      841 fggvfsyvrd ernnillert pdggetrfew vdnqlvaeid plggrttyqr ndwghvtevt
      901 lpdgtvhqya yddngqllay tdplgsewry qrnaagqvve vndpegrewl yrygdtgqls
      961 tvigpdgvlq ryhynrrgll sslerdnaps vmfryddldr lterhighea gvqvrrweyd
     1021 gvrespskvv yedgsetrfg ydvegnltav tdalgqryqf rygafdnlle atdplgatvr
     1081 yhynaeaefa gvtnsqgrdw tygfdgsgrl seerhydgr
//
LOCUS       WP_235208467             233 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF2931 family protein [Pectobacterium].
ACCESSION   WP_235208467
VERSION     WP_235208467.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium
  ORGANISM  Pectobacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022602.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11153.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Pectobacterium"
                     /db_xref="taxon:122277"
     Protein         1..233
                     /product="DUF2931 family protein"
                     /calculated_mol_wt=26179
     Region          21..210
                     /region_name="DUF2931"
                     /note="Protein of unknown function (DUF2931); pfam11153"
                     /db_xref="CDD:431686"
ORIGIN      
        1 mmlryfimvm glcisltacs tpnvrtpvsw sygsgsnids fcttkatfyh kgetvfsypg
       61 ggcnagapyk siidkkyywa gggglptegv ptpdkasiem vsfydrkryr itvslpadla
      121 qqmqqryqvg ertdqrswly fglapggyye vllkadrllv kpdlllargi aeevtddwyd
      181 kkvpvarqyg iddfdkeyge lfkqhpiplg mdwapimday ranqpktdqq pvk
//
LOCUS       WP_235208482             821 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Pectobacterium
            brasiliense].
ACCESSION   WP_235208482
VERSION     WP_235208482.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium brasiliense
  ORGANISM  Pectobacterium brasiliense
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 821)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..821
                     /organism="Pectobacterium brasiliense"
                     /db_xref="taxon:180957"
     Protein         <1..>821
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          2..>821
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
ORIGIN      
        1 aqvliggeai spevwsrlqa lsdtrfinvy gptectvdat acvvdhtqpl ptigkplant
       61 rlyildaqgq pvpigvtgel higgagvarg ylhrpdltad rfiadpfsad paarlyktgd
      121 larwqpdgri dylgrndfqi kvrgfrieag eiesrllrcp gvqdavviar edhpgdtrlv
      181 aylcarsdae lhpvalrqql aasladymip safvtldalp ltpngkidrk alpapdqtaf
      241 atrdyeapqg atestlaalw qellglervg rhdqffalgg hsllavqlln rmnkagmdva
      301 laalfahptl cdlaaavtvt ahdvpftlpv adrtqplpls faqqrlwfla qldpaasqay
      361 hlpaalrlsg rldhpaltsa lnglvarhes lrtrftsldg qpaqqidpdt igfslsshdl
      421 reldeaartt rvaelaeqea rapfdlaqgp lirgqllqmd ddthvllltq hhiisdgwsi
      481 gilarelapl yqaaldgsda nlpplpvqya dyavwqrqwl qgdtlndlrd ywrnqlqgap
      541 allelptdrp rpsvqryagd qvpfhldagq lrrlhalnrq qgttlfmtll aawsvvlsrl
      601 sgqddivigt pianrprqel egmvgffant lalrtepgrc hsvadlldqv reraldayah
      661 qalpfeqvve alqparslsy spifqvmlsl nntptqpltl pdltlsaver pqhsthfdlt
      721 lslvetengl dggliyatdl fdrdtiirvv gyveniliai addvaqpvat lpmlpeaerr
      781 qvmvdfnatd adfpqdalih qlvedqavrt peaiavlfed q
//
LOCUS       WP_235208490             178 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Pectobacterium brasiliense].
ACCESSION   WP_235208490
VERSION     WP_235208490.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium brasiliense
  ORGANISM  Pectobacterium brasiliense
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 178)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Pectobacterium brasiliense"
                     /db_xref="taxon:180957"
     Protein         <1..>178
                     /product="AMP-binding protein"
     Region          <2..>178
                     /region_name="EntF"
                     /note="seryl-AMP synthase component of non-ribosomal
                     peptide synthetase [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG1020"
                     /db_xref="CDD:440643"
ORIGIN      
        1 lslgvkpddr valcversle mmvgllgilk agaayvpmdp aypaerlaym lddaapvall
       61 tqsaqvapls stlptvlldt passdypdtn pvvqglnath layviytsgs tgkpkgvmva
      121 hrnvlhlatg lktllalehp srialnasiv fdasvknwiq llsghtlvlv pdairada
//
LOCUS       WP_235208535             407 aa            linear   BCT 02-MAR-2025
DEFINITION  YbfB/YjiJ family MFS transporter [Sulfitobacter pontiacus].
ACCESSION   WP_235208535
VERSION     WP_235208535.1
KEYWORDS    RefSeq.
SOURCE      Sulfitobacter pontiacus
  ORGANISM  Sulfitobacter pontiacus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Sulfitobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018485.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06779.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Sulfitobacter pontiacus"
                     /db_xref="taxon:60137"
     Protein         1..407
                     /product="YbfB/YjiJ family MFS transporter"
                     /calculated_mol_wt=42351
     Region          27..380
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(35..36,39..40,43,75,125..126,128..130,133,151,
                     154..155,159,232,235..236,239..241,244,271,275,320..321,
                     325,329,349,352..353,356..357,360)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 maeilqpdgn pslprpvtrp wlallgltlg vtvtngfarf ayglilpamk teldwtyaqa
       61 gwlntanaig yiigavltll ligriaparl fgfgmvtttl tllatgyeat mgwqtfwria
      121 agvfgamsfs tagvltarlf pgdarrnala iailfgaggg igimlagasl plmiefwgtg
      181 swrygwyiig visvaclpls lwaaarlsvp aqrntaaggi klhliwrela gyvgfamgyi
      241 vyltflsawm tdqqapalli savwiimgva liaspfvwrg vlarhasgkp lamiltgiai
      301 gsalplvlpa ggavvisavv fglcvfmapg aitsfirqnl paeswaaams lftvvfaiaq
      361 tagpfaagal gdltgnigss llaaaaillt gaavvvfqkp lpqqdps
//
LOCUS       WP_235208516             589 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Sulfitobacter pontiacus].
ACCESSION   WP_235208516
VERSION     WP_235208516.1
KEYWORDS    RefSeq.
SOURCE      Sulfitobacter pontiacus
  ORGANISM  Sulfitobacter pontiacus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Sulfitobacter.
REFERENCE   1  (residues 1 to 589)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 589)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 589)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 589)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Sulfitobacter pontiacus"
                     /db_xref="taxon:60137"
     Protein         1..589
                     /product="ATP-binding protein"
                     /calculated_mol_wt=65045
     Region          18..>365
                     /region_name="CHASE4"
                     /note="Extracellular (periplasmic) sensor domain CHASE
                     (specificity unknown) [Signal transduction mechanisms];
                     COG3322"
                     /db_xref="CDD:442551"
     Region          213..582
                     /region_name="WalK"
                     /note="Sensor histidine kinase WalK [Signal transduction
                     mechanisms]; COG5002"
                     /db_xref="CDD:444026"
ORIGIN      
        1 mgvtyrtrsf efdmpsrsnr lslqisaslf vvfglgffgl lvignsamnl sdrealsreq
       61 rlaarnleaa iqtlpeqqrs atvwddavnr tkeldiewmd enlgvwmeey fghnenfvln
      121 eennaiyasa qgevkalgfy ssrsdvvapi arqlrqrlnk aatradfsye tlaeiqavrp
      181 velddqvaiv svvpivtdtg eldqklgsey lhvairyvdd alaaqvaepi elddyrfdkn
      241 rpegslagia lasaggnpla wlvwaprtpg sdlffellpv ftavasagii lllwvirrll
      301 kfsrmledse rqalldidal qkakqeataa draklnfmsv vshelrtplt vilgyarlgk
      361 nidrmpaset llrelktnsr dgdiatkcvn dvlnlattgm ekiersgehl lflvnqlldy
      421 akmetgrlel dtevcdvqel lepvidqmrv ltdqkglnlr ssihrcnlia dvtrtrqili
      481 nllgnaikft dkgtvsvlve etsqrvnisv sdtgpgieig elkkifeafh qadlsqsrna
      541 agtglglsva relaklengt idvtsevgvg stftlslpkd neseleqaa
//
LOCUS       WP_235208631             501 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Halomonas sp. TG39a].
ACCESSION   WP_235208631
VERSION     WP_235208631.1
KEYWORDS    RefSeq.
SOURCE      Halomonas sp. TG39a
  ORGANISM  Halomonas sp. TG39a
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Halomonas.
REFERENCE   1  (residues 1 to 501)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Halomonas sp. TG39a"
                     /db_xref="taxon:1415755"
     Protein         1..501
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=54202
     Region          23..167
                     /region_name="sCache_2"
                     /note="Single Cache domain 2; pfam17200"
                     /db_xref="CDD:435780"
     Region          <176..499
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(286..287,290..291,294,297..298,300..301,304,
                     307..308,311,314..315,318..319,322,325..326,328..329,333,
                     335..336,339,342..343,346..347,350,353,356..357,360,364,
                     367,374,378,381,384..385,388,391..392,395..396,398..399,
                     402..403,416..417,420,423..424,427,430..431,433..434,
                     437..438,441,444..445,448,451..452,454..455,458..459,
                     461..462,465,468..469,472,475..476)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            356..389
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 mlwlilaimi vvnawqsral lytereqrmv tavdiavstm ehfdmlaqqg ditldeaktl
       61 aldtirdvrf geednylfaf sgdlkmlahp krergddlaq vtdpegtrif qaildntrgt
      121 gssfteyysn fargndaqpl vrtyaeaygp wdmyiasgvf mgdvnsaimg qliesvvvgi
      181 lagvlvtiaf wsmislilrr lggepsyaas vvgriaqgdl satvllsqnd tssllhdiqa
      241 mrdklretmq eiqttssavd hnageiasgn qelssrteqq aaalqqtsss meevtatvrq
      301 nadsveqake lvrnagetsq agqqaigeav tsmqainaea akiteivtli dgiafqtnil
      361 alnasveaar agehgrgfav vagevrqlan rsanaaqeik tlidtsntqv sngatlvgta
      421 kermqkidqq iqqvndlftd itaatheqtr gieqinvaia qldqatqdna smvqqtatsa
      481 hdltkrsqsl ndvvshftlt h
//
LOCUS       WP_235208743             215 aa            linear   BCT 02-MAR-2025
DEFINITION  homocysteine S-methyltransferase family protein, partial
            [Thermoanaerobaculum aquaticum].
ACCESSION   WP_235208743
VERSION     WP_235208743.1
KEYWORDS    RefSeq.
SOURCE      Thermoanaerobaculum aquaticum
  ORGANISM  Thermoanaerobaculum aquaticum
            Bacteria; Pseudomonadati; Acidobacteriota; Thermoanaerobaculia;
            Thermoanaerobaculales; Thermoanaerobaculaceae; Thermoanaerobaculum.
REFERENCE   1  (residues 1 to 215)
  AUTHORS   Thanbichler,M., Neuhierl,B. and Bock,A.
  TITLE     S-methylmethionine metabolism in Escherichia coli
  JOURNAL   J Bacteriol 181 (2), 662-665 (1999)
   PUBMED   9882684
REFERENCE   2  (residues 1 to 215)
  AUTHORS   Chen,L.H., Liu,M.L., Hwang,H.Y., Chen,L.S., Korenberg,J. and
            Shane,B.
  TITLE     Human methionine synthase. cDNA cloning, gene localization, and
            expression
  JOURNAL   J Biol Chem 272 (6), 3628-3634 (1997)
   PUBMED   9013615
REFERENCE   3  (residues 1 to 215)
  AUTHORS   Garrow,T.A.
  TITLE     Purification, kinetic properties, and cDNA cloning of mammalian
            betaine-homocysteine methyltransferase
  JOURNAL   J Biol Chem 271 (37), 22831-22838 (1996)
   PUBMED   8798461
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014615.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02574.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Thermoanaerobaculum aquaticum"
                     /db_xref="taxon:1312852"
     Protein         1..>215
                     /product="homocysteine S-methyltransferase family protein"
     Region          1..>215
                     /region_name="MHT1"
                     /note="Homocysteine/selenocysteine methylase
                     (S-methylmethionine-dependent) [Amino acid transport and
                     metabolism]; COG2040"
                     /db_xref="CDD:441643"
ORIGIN      
        1 mgsellrrgv asaatlwgvg alihdpqavl qvhrdylaag cdvltantfr vapyslrrlq
       61 rypnpqelak tavelareaa rsaarrvvvl asmttledcy rpdlvpddat laeehrrtae
      121 vlaaagpdgl lletfntvre araacqaala tglpvivcft cqsggrllsg enageaarav
      181 sipgviavgv nctrlsdlmp altqmacstd lplva
//
LOCUS       WP_235208753              38 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Pseudomonas savastanoi].
ACCESSION   WP_235208753
VERSION     WP_235208753.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas savastanoi
  ORGANISM  Pseudomonas savastanoi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 38)
  AUTHORS   Yeo,C.C. and Poh,C.L.
  TITLE     Characterization of IS1474, an insertion sequence of the IS21
            family isolated from Pseudomonas alcaligenes NCIB 9867
  JOURNAL   FEMS Microbiol Lett 149 (2), 257-263 (1997)
   PUBMED   9141667
REFERENCE   2  (residues 1 to 38)
  AUTHORS   Solinas,F., Marconi,A.M., Ruzzi,M. and Zennaro,E.
  TITLE     Characterization and sequence of a novel insertion sequence,
            IS1162, from Pseudomonas fluorescens
  JOURNAL   Gene 155 (1), 77-82 (1995)
   PUBMED   7698671
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01695.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..38
                     /organism="Pseudomonas savastanoi"
                     /db_xref="taxon:29438"
     Protein         <1..38
                     /product="ATP-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <1..27
                     /region_name="IS21_help_AAA"
                     /note="IS21-like element helper ATPase IstB; NF038214"
                     /db_xref="CDD:439516"
ORIGIN      
        1 tlgdaildrl vhnayrielk gesmrrratk ltaagasd
//
LOCUS       WP_235208803             293 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Pseudomonas
            savastanoi].
ACCESSION   WP_235208803
VERSION     WP_235208803.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas savastanoi
  ORGANISM  Pseudomonas savastanoi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Pseudomonas savastanoi"
                     /db_xref="taxon:29438"
     Protein         1..>293
                     /product="DUF6531 domain-containing protein"
     Region          135..197
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
ORIGIN      
        1 mkskkiffkt flvfiaqaiy lspvradvyk twrtdgnlpd ayfetpeqmc etlyeswphm
       61 tqfykpennr yisqfyyacg fnssypttfg dgvlitlncp egerpnprys actkesakgr
      121 ddhsmscssp stlagnpinf tygnkiqdet dfesktmris rfynssdslw rhnfstylff
      181 sdrsavmvrs dgkenlfsps tenyisktdv gilkkendsw rydglnhevl ffsasgdltq
      241 vndpqgvvyk lvyskrgtgr eivvnnnyge svvlvegarr riksvktttq dit
//
LOCUS       WP_235208805             505 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein [Pseudomonas savastanoi].
ACCESSION   WP_235208805
VERSION     WP_235208805.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas savastanoi
  ORGANISM  Pseudomonas savastanoi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Pseudomonas savastanoi"
                     /db_xref="taxon:29438"
     Protein         1..505
                     /product="DUF6531 domain-containing protein"
                     /calculated_mol_wt=56261
     Region          139..198
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
     Region          <303..>498
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
ORIGIN      
        1 mnnftrffaa litlalvgee saqartykfw wegyippvif qtpeqgceyi yyvelpgiss
       61 yyrpeksfyd pdfkfkrfqc gsdlnqgyfg svdygevtcd dsevldfpsm qckrigaigr
      121 ateistcdvp tstpdvfvgn pvnvisgnkm qqeidltagg ghsikvfrty nslngawvhn
      181 fssrldfasg svvvikgdsg asayteksgv ytsvsdigkl sydgvnsqwi ynsvdrstyf
      241 ysaigklikv snpdggnvtl nyvvgssstr iqlsdeyeni veleedsrhq llsmkskdfm
      301 vnytynssgm lsrvaksngg vemvrsykye spssdkfltg ilnergivya sgeydslgra
      361 vsskhanesq kteitygtgy stvinslgrk siyhyevigg iqkitsiege ptpncpysns
      421 tytyndrglv ltktdakgli ttyeyndrgf eisrteasgt mlarttttew dpdrflpirv
      481 iepnrvtvys ydnqgreltr rstsr
//
LOCUS       WP_235208839             248 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Pseudomonas savastanoi].
ACCESSION   WP_235208839
VERSION     WP_235208839.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas savastanoi
  ORGANISM  Pseudomonas savastanoi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 248)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 248)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Pseudomonas savastanoi"
                     /db_xref="taxon:29438"
     Protein         1..248
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=27458
     Region          <2..233
                     /region_name="integrase_1"
                     /note="site-specific integrase; NF041502"
                     /db_xref="CDD:469389"
ORIGIN      
        1 mlkvgdvrei tkadgateyv lrvprvkqgr aearreqfke rlitpsigkm lidyassvrt
       61 rfgdgdefti gpsqaplfpq kkttkkvrpg fqqhtspkei gnrvrsvfea lrvysertge
      121 hikitskrlr htvatsaare ghgeliiael ldhsdtqnvg iyvkatpeii eridravalr
      181 maplahafag aviisesaat rgddptsriv dprfdetmkp mgncgrdgpc gfmghlrikp
      241 devlfped
//
LOCUS       WP_235208854             402 aa            linear   BCT 02-MAR-2025
DEFINITION  HupE/UreJ family protein [Ralstonia solanacearum].
ACCESSION   WP_235208854
VERSION     WP_235208854.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia solanacearum
  ORGANISM  Ralstonia solanacearum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Ralstonia; Ralstonia
            solanacearum species complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025167.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13795.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Ralstonia solanacearum"
                     /db_xref="taxon:305"
     Protein         1..402
                     /product="HupE/UreJ family protein"
                     /calculated_mol_wt=42921
     Region          168..315
                     /region_name="HupE_UreJ_2"
                     /note="HupE / UreJ protein; cl01011"
                     /db_xref="CDD:470032"
ORIGIN      
        1 mahpmpesrv widttpaglr ltlqlplnrl eygfgqplad fpgtvlarhg ealsryllqh
       61 vgargggqdw qasrpqltvv gadasaelea vidlrapdga arraptllyd aithevrthr
      121 vlvflrndwa ggfasgppll lgelnhghts lliplepaqp gasvlrllre gilhiaegtd
      181 hllfllmllv vaplvagshr wnqvrpvrqa lrhtalvvta ftaghtitlv lgsmglltvp
      241 tqsvevavav tiaiaawhaw rplfahaeaw malifglihg mafsaslsga gltpwqhaqa
      301 llafnlgiea mqlaavvvvm ppllvlvrtq paryatlrrc lsaivgalal awiierlnla
      361 slgalpsiad gwpvlalipg llwlaalasg gqrrfrvaas ed
//
LOCUS       WP_235208857              42 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Pseudomonas savastanoi].
ACCESSION   WP_235208857
VERSION     WP_235208857.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas savastanoi
  ORGANISM  Pseudomonas savastanoi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 42)
  AUTHORS   Yeo,C.C. and Poh,C.L.
  TITLE     Characterization of IS1474, an insertion sequence of the IS21
            family isolated from Pseudomonas alcaligenes NCIB 9867
  JOURNAL   FEMS Microbiol Lett 149 (2), 257-263 (1997)
   PUBMED   9141667
REFERENCE   2  (residues 1 to 42)
  AUTHORS   Solinas,F., Marconi,A.M., Ruzzi,M. and Zennaro,E.
  TITLE     Characterization and sequence of a novel insertion sequence,
            IS1162, from Pseudomonas fluorescens
  JOURNAL   Gene 155 (1), 77-82 (1995)
   PUBMED   7698671
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01695.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..42
                     /organism="Pseudomonas savastanoi"
                     /db_xref="taxon:29438"
     Protein         <1..42
                     /product="ATP-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <1..31
                     /region_name="IS21_help_AAA"
                     /note="IS21-like element helper ATPase IstB; NF038214"
                     /db_xref="CDD:439516"
ORIGIN      
        1 igdptlgdai ldrlvhnayr ielkgesmrr ratkltaaga sd
//
LOCUS       WP_235208897              40 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Pseudomonas savastanoi].
ACCESSION   WP_235208897
VERSION     WP_235208897.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas savastanoi
  ORGANISM  Pseudomonas savastanoi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 40)
  AUTHORS   Yeo,C.C. and Poh,C.L.
  TITLE     Characterization of IS1474, an insertion sequence of the IS21
            family isolated from Pseudomonas alcaligenes NCIB 9867
  JOURNAL   FEMS Microbiol Lett 149 (2), 257-263 (1997)
   PUBMED   9141667
REFERENCE   2  (residues 1 to 40)
  AUTHORS   Solinas,F., Marconi,A.M., Ruzzi,M. and Zennaro,E.
  TITLE     Characterization and sequence of a novel insertion sequence,
            IS1162, from Pseudomonas fluorescens
  JOURNAL   Gene 155 (1), 77-82 (1995)
   PUBMED   7698671
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01695.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..40
                     /organism="Pseudomonas savastanoi"
                     /db_xref="taxon:29438"
     Protein         <1..40
                     /product="ATP-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <1..29
                     /region_name="IS21_help_AAA"
                     /note="IS21-like element helper ATPase IstB; NF038214"
                     /db_xref="CDD:439516"
ORIGIN      
        1 dptlgdaild rlvhnayrie lkgesmrrra tkltaagasd
//
LOCUS       WP_235208913             793 aa            linear   BCT 02-MAR-2025
DEFINITION  ShET2/EspL2 family type III secretion system effector toxin
            [Ralstonia solanacearum].
ACCESSION   WP_235208913
VERSION     WP_235208913.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia solanacearum
  ORGANISM  Ralstonia solanacearum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Ralstonia; Ralstonia
            solanacearum species complex.
REFERENCE   1  (residues 1 to 793)
  AUTHORS   Nataro,J.P., Seriwatana,J., Fasano,A., Maneval,D.R., Guers,L.D.,
            Noriega,F., Dubovsky,F., Levine,M.M. and Morris,J.G. Jr.
  TITLE     Identification and cloning of a novel plasmid-encoded enterotoxin
            of enteroinvasive Escherichia coli and Shigella strains
  JOURNAL   Infect Immun 63 (12), 4721-4728 (1995)
   PUBMED   7591128
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019521.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07906.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..793
                     /organism="Ralstonia solanacearum"
                     /db_xref="taxon:305"
     Protein         1..793
                     /product="ShET2/EspL2 family type III secretion system
                     effector toxin"
                     /calculated_mol_wt=84333
     Region          97..374
                     /region_name="Toxin_15"
                     /note="ShET2 enterotoxin, N-terminal region; pfam07906"
                     /db_xref="CDD:369588"
ORIGIN      
        1 mrhpipsrrl apgplqgeav psdpsrpaqa pgpgpaspak sygslealrt lgkpprrppt
       61 agestlrlan tlprsplanr cnegegaspd gvgregpavs ketpyfpdne rretnlnahi
      121 lfapgtnpit drlwcrhlar ayqrtaeddd ngkvdfnrfa iagephydnf vdrawrdnyl
      181 ppheenlgla pamqrtvidg drfgvflgea fkelasigrn hatailstan fgetpaeaat
      241 ytghalsvsm rikrdgegrd vyvarvydpn rtfthkrvrv tdlqslghlt fhdfldtgvd
      301 ygrpsvltvv spslsleqdp astragdatl kgrlhlamqa nmprevrava qqlrkpatra
      361 dlsdeeltal laakdasgip algaamfwsy aevmaiygel vresglepea qaellaarsa
      421 egvpelqldv lsgrndtlla yealmrrsgl apemqaella arrpadgqpa malallpslr
      481 thdipylggf plqiygamvl rsglpidtqa ellagknqyg vpalqlavll ghqaevvayg
      541 elirgsglpp atqaellaar rtdgvsamel allpppeadd fpylpdslkt ygtmilqsgl
      601 pvetqidllt srnrpefqgv pifhlamags tdgnliagfa smvlrselpe hakvtllaar
      661 mprngppalg qavtlgngta aclfasevlq selaasakve liagkdatgt palavamakg
      721 argtasflvr qilasdlpda mkaellagkn akgvtalega vkagrlgvve scrdiigrse
      781 lppamqaell agt
//
LOCUS       WP_235208924             232 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Pseudomonas savastanoi].
ACCESSION   WP_235208924
VERSION     WP_235208924.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas savastanoi
  ORGANISM  Pseudomonas savastanoi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Pseudomonas savastanoi"
                     /db_xref="taxon:29438"
     Protein         1..>232
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <11..226
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mhissqmklk gffqlvsvrf vqgigytisi igilafavns aqarerasqf sinsifsflg
       61 yalgpalgef viqrlgyart femasamcfl aaaficagre pllnspsgpt istkskkppp
      121 lrstciqlml vaaplgmaea fvpifsrqeg ygsvsaffli facatlairv nmsklscwrs
      181 ftwlaqagal lctlaltvla asnsksmmla assfmglgwg lvfpsligln ae
//
LOCUS       WP_235208929             178 aa            linear   BCT 02-MAR-2025
DEFINITION  MobA/MobL family protein [Pseudomonas savastanoi].
ACCESSION   WP_235208929
VERSION     WP_235208929.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas savastanoi
  ORGANISM  Pseudomonas savastanoi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015354.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03389.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Pseudomonas savastanoi"
                     /db_xref="taxon:29438"
     Protein         1..178
                     /product="MobA/MobL family protein"
                     /calculated_mol_wt=19781
     Region          2..162
                     /region_name="MobQ"
                     /note="MobQ family relaxase; NF041496"
                     /db_xref="CDD:469384"
ORIGIN      
        1 mrtglvhdyt wrdgvfytei mlpdgtsaer nalwnaaesa ekrkdgrtgr ewiialpael
       61 dedarqelas afgvelatry gvavdlaihl pnregdnrnh hafvmtttrq vsrdatgllv
      121 mgekstiels dtkrrsvglg saadevvair qlwermanra legriektek ivlqglph
//
LOCUS       WP_235208948             299 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: LuxR C-terminal-related transcriptional regulator
            [Streptomyces].
ACCESSION   WP_235208948
VERSION     WP_235208948.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..299
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=31994
     Region          2..217
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mtllladeqp lvrgglralf aatpsfrieg eaengdalve larlhapdvv lmdaalpgpr
       61 vlevvrhlar dqphpigvvl lvseqgpadt wvleaaraga rglllksggq eailsgvrdv
      121 aaggiamste fvsqilkalh saylpaaerp frdislltpr emqvfrlvsq gltnqqisnr
      181 lvlseatvks hfnrichkld lrnrvdavil ayetgiagsp gryrvttrhe rtadefphsr
      241 nttteparkg glvthhdvrs dfdsactdpg spfpsgrrrt faggagvdig glsgddgrs
//
LOCUS       WP_235209024             126 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase [Paenibacillus polymyxa].
ACCESSION   WP_235209024
VERSION     WP_235209024.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus polymyxa
  ORGANISM  Paenibacillus polymyxa
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 126)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 126)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Paenibacillus polymyxa"
                     /db_xref="taxon:1406"
     Protein         1..126
                     /product="phosphotransferase"
                     /calculated_mol_wt=14323
     Region          <11..82
                     /region_name="APH"
                     /note="Phosphotransferase enzyme family; pfam01636"
                     /db_xref="CDD:426359"
ORIGIN      
        1 mlntlpegna lchydfhpgn iilsskgpii idwmnvlvgn qaadvtrtsm miqshalpsn
       61 apgwlikrey reffnreylr eylmlsgmnp nfleewmapt laarvcevng edrnevidkl
      121 qtiikn
//
LOCUS       WP_235209100             158 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Paenibacillus polymyxa].
ACCESSION   WP_235209100
VERSION     WP_235209100.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus polymyxa
  ORGANISM  Paenibacillus polymyxa
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Paenibacillus polymyxa"
                     /db_xref="taxon:1406"
     Protein         1..158
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=17881
     Region          11..>85
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mseitgttli lfliakglsl qsanfllvvf fvsiflfeip tgaiadkygr kisvvlglcc
       61 flvysvlfvw tdrmwllvfa qvfggwqyac nqarwnpglw ktvispwkff lqpqtvystf
      121 rdlfvvcwgp ssqhltihfp gqpalsllsy vlfyaafi
//
LOCUS       WP_235209168             327 aa            linear   BCT 02-MAR-2025
DEFINITION  alcohol dehydrogenase catalytic domain-containing protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_235209168
VERSION     WP_235209168.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 327)
  AUTHORS   Taneja,B. and Mande,S.C.
  TITLE     Conserved structural features and sequence patterns in the GroES
            fold family
  JOURNAL   Protein Eng 12 (10), 815-818 (1999)
   PUBMED   10556240
REFERENCE   2  (residues 1 to 327)
  AUTHORS   Murzin,A.G.
  TITLE     Structural classification of proteins: new superfamilies
  JOURNAL   Curr Opin Struct Biol 6 (3), 386-394 (1996)
   PUBMED   8804825
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08240.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>327
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
     Region          1..327
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
     Site            order(33..35,38,155,159,185..190,209..210,214,228,
                     253..254,290..291,326..327)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176178"
ORIGIN      
        1 mkvntfkfpe litpqgksap hgailkivtt nicgsdlhiy rgsfavpkgm tmghemtgev
       61 ievgsdvevv kkgdivsvpf nvgcgrcync khmrsdvcen tnpeidcgay gfnlggwtgg
      121 qgdylfvpya dfnllrfpdk daamekirdl tllsdvlpta fhgfagpdwp aapayvvgen
      181 ilifgagpvg ragaacarll gagaiivady iqerldllkp hgvetinlsd gvpieehler
      241 itghrevdrv idyvgvdcrg fgaeadkive savtnamlky vrfggmtstv gvycanpisk
      301 dpkakkghmd lewsnawiks prmsagq
//
LOCUS       WP_235209184             218 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Methylobacter sp. BBA5.1].
ACCESSION   WP_235209184
VERSION     WP_235209184.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter sp. BBA5.1
  ORGANISM  Methylobacter sp. BBA5.1
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
REFERENCE   1  (residues 1 to 218)
  AUTHORS   Davies,D.R., Mahnke Braam,L., Reznikoff,W.S. and Rayment,I.
  TITLE     The three-dimensional structure of a Tn5 transposase-related
            protein determined to 2.9-A resolution
  JOURNAL   J Biol Chem 274 (17), 11904-11913 (1999)
   PUBMED   10207011
REFERENCE   2  (residues 1 to 218)
  AUTHORS   DasSarma,S.
  TITLE     Identification and analysis of the gas vesicle gene cluster on an
            unstable plasmid of Halobacterium halobium
  JOURNAL   Experientia 49 (6-7), 482-486 (1993)
   PUBMED   8335077
REFERENCE   3  (residues 1 to 218)
  AUTHORS   Ferrante,A.A. and Lessie,T.G.
  TITLE     Nucleotide sequence of IS402 from Pseudomonas cepacia
  JOURNAL   Gene 102 (1), 143-144 (1991)
   PUBMED   1650732
REFERENCE   4  (residues 1 to 218)
  AUTHORS   De Meirsman,C., Van Soom,C., Verreth,C., Van Gool,A. and
            Vanderleyden,J.
  TITLE     Nucleotide sequence analysis of IS427 and its target sites in
            Agrobacterium tumefaciens T37
  JOURNAL   Plasmid 24 (3), 227-234 (1990)
   PUBMED   1963949
REFERENCE   5  (residues 1 to 218)
  AUTHORS   Sato,S., Nakada,Y. and Shiratsuchi,A.
  TITLE     IS421, a new insertion sequence in Escherichia coli
  JOURNAL   FEBS Lett 249 (1), 21-26 (1989)
   PUBMED   2542093
REFERENCE   6  (residues 1 to 218)
  AUTHORS   Kroger,M. and Hobom,G.
  TITLE     Structural analysis of insertion sequence IS5
  JOURNAL   Nature 297 (5862), 159-162 (1982)
   PUBMED   6281654
REFERENCE   7  (residues 1 to 218)
  AUTHORS   Klaer,R., Kuhn,S., Tillmann,E., Fritz,H.J. and Starlinger,P.
  TITLE     The sequence of IS4
  JOURNAL   Mol Gen Genet 181 (2), 169-175 (1981)
   PUBMED   6268937
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01609.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Methylobacter sp. BBA5.1"
                     /db_xref="taxon:1495064"
     Protein         1..218
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=24736
     Region          3..206
                     /region_name="transpos_IS982"
                     /note="IS982 family transposase; NF033520"
                     /db_xref="CDD:468056"
ORIGIN      
        1 mayvqrlnrv tevfapllet iqqeqapash hqawlidsfp valvkqghrf karvakelad
       61 ssyratkkly yygvrvhvig srqpgslpap eyigmrgasi hdgkvldqir pyvhdqdlyg
      121 dkayqrpdad avrqtqnlti ltpvkkqkgq hylepqdqwl stavsrvrqp iealfawiee
      181 ktgiecvskv rsynglmvhv fgklaaalff wnflrtss
//
LOCUS       WP_235209232             888 aa            linear   BCT 02-MAR-2025
DEFINITION  MGH1-like glycoside hydrolase domain-containing protein
            [Methylobacter sp. BBA5.1].
ACCESSION   WP_235209232
VERSION     WP_235209232.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter sp. BBA5.1
  ORGANISM  Methylobacter sp. BBA5.1
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
REFERENCE   1  (residues 1 to 888)
  AUTHORS   Ndeh,D., Rogowski,A., Cartmell,A., Luis,A.S., Basle,A., Gray,J.,
            Venditto,I., Briggs,J., Zhang,X., Labourel,A., Terrapon,N.,
            Buffetto,F., Nepogodiev,S., Xiao,Y., Field,R.A., Zhu,Y.,
            O'Neil,M.A., Urbanowicz,B.R., York,W.S., Davies,G.J., Abbott,D.W.,
            Ralet,M.C., Martens,E.C., Henrissat,B. and Gilbert,H.J.
  TITLE     Complex pectin metabolism by gut bacteria reveals novel catalytic
            functions
  JOURNAL   Nature 544 (7648), 65-70 (2017)
   PUBMED   28329766
  REMARK    Erratum:[Nature. 2017 Aug 31;548(7669):612. doi:
            10.1038/nature23659.. PMID: 29411780]
REFERENCE   2  (residues 1 to 888)
  AUTHORS   Bianchetti,C.M., Elsen,N.L., Fox,B.G. and Phillips,G.N. Jr.
  TITLE     Structure of cellobiose phosphorylase from Clostridium thermocellum
            in complex with phosphate
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 67 (Pt 11),
            1345-1349 (2011)
   PUBMED   22102229
REFERENCE   3  (residues 1 to 888)
  AUTHORS   Kurakata,Y., Uechi,A., Yoshida,H., Kamitori,S., Sakano,Y.,
            Nishikawa,A. and Tonozuka,T.
  TITLE     Structural insights into the substrate specificity and function of
            Escherichia coli K12 YgjK, a glucosidase belonging to the glycoside
            hydrolase family 63
  JOURNAL   J Mol Biol 381 (1), 116-128 (2008)
   PUBMED   18586271
  REMARK    Erratum:[J Mol Biol. 2008 Nov 14;383(3):745]
REFERENCE   4  (residues 1 to 888)
  AUTHORS   Cui,Z., Maruyama,Y., Mikami,B., Hashimoto,W. and Murata,K.
  TITLE     Crystal structure of glycoside hydrolase family 78
            alpha-L-Rhamnosidase from Bacillus sp. GL1
  JOURNAL   J Mol Biol 374 (2), 384-398 (2007)
   PUBMED   17936784
REFERENCE   5  (residues 1 to 888)
  AUTHORS   Gibson,R.P., Gloster,T.M., Roberts,S., Warren,R.A., Storch de
            Gracia,I., Garcia,A., Chiara,J.L. and Davies,G.J.
  TITLE     Molecular basis for trehalase inhibition revealed by the structure
            of trehalase in complex with potent inhibitors
  JOURNAL   Angew Chem Int Ed Engl 46 (22), 4115-4119 (2007)
   PUBMED   17455176
REFERENCE   6  (residues 1 to 888)
  AUTHORS   Hidaka,M., Honda,Y., Kitaoka,M., Nirasawa,S., Hayashi,K.,
            Wakagi,T., Shoun,H. and Fushinobu,S.
  TITLE     Chitobiose phosphorylase from Vibrio proteolyticus, a member of
            glycosyl transferase family 36, has a clan GH-L-like
            (alpha/alpha)(6) barrel fold
  JOURNAL   Structure 12 (6), 937-947 (2004)
   PUBMED   15274915
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046269.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22422.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Methylobacter sp. BBA5.1"
                     /db_xref="taxon:1495064"
     Protein         1..888
                     /product="MGH1-like glycoside hydrolase domain-containing
                     protein"
                     /calculated_mol_wt=102531
     Region          431..885
                     /region_name="GDB1"
                     /note="Glycogen debranching enzyme (alpha-1,6-glucosidase)
                     [Carbohydrate transport and metabolism]; COG3408"
                     /db_xref="CDD:442634"
ORIGIN      
        1 mtkdtfqset etgrpvsaer rrmldqnsge aawrlwgpyl serqwgtvre dyskngdawd
       61 yfshdqarsr ayrwgedgia glcdekqwlc lglalwngqd ailkerlfgl tneegnhged
      121 vkelyyylda tpshaylkml ykypqqafpy aalveenrkr grdrpefell dtgvfddnry
      181 fdvfieyaka gvddilmlit ahnrggdlat lhvlpqlwfr ntwswgydvi rpalaaaetg
      241 giqihqadlg dyhcyfdgdp ellfcdnetn lrhlynqpad gyfkdalhdw lingnrqavn
      301 peqygtkaag hyrlsvpahg kvevrlrlsk trnarpfhdf nelftlrrde addfyaelqa
      361 gmtdaearli qrqalagmiw skqfyyydip qwlngdpgti ppprerlngr nsdwqhlnna
      421 divsmpdtwe ypwyaawdla fhcvtlamid pvfaknqlll mtrewymhpn gqmpayewkl
      481 gdvnppvhaw aawevyqser qsnggigdld flerimhkli inftwwvnrk daddnnvfqg
      541 gflgldnigv fdrstplpgg ghidqadgts wmamyclnlm rialelalhd rvyediatkf
      601 fehflyiaka msdisdqhig lwdeddqffy dvlrspdgtk iplkvrsmig lipfyavevi
      661 gselldklpd fkrrmkwfld yrpdlaslvs dwnepgrgnr hllsllrghr mrkllqrmld
      721 eteflsdfgv rslsrahrdq pyvvscastp msvhyqpgea esgmfggnsn wrgpvwfpvn
      781 yllitslrrf asfygegfki ecptgsgrll sinevadels rrlirifrkd angrrpaygg
      841 derlqndphf kdyllfheyf hgdeghglga shqtgwtglv akllqprp
//
LOCUS       WP_235209335             499 aa            linear   BCT 02-MAR-2025
DEFINITION  trypsin-like peptidase domain-containing protein, partial
            [Streptomyces rimosus].
ACCESSION   WP_235209335
VERSION     WP_235209335.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces rimosus
  ORGANISM  Streptomyces rimosus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024758.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13365.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Streptomyces rimosus"
                     /db_xref="taxon:1927"
     Protein         <1..499
                     /product="trypsin-like peptidase domain-containing
                     protein"
     Region          <11..92
                     /region_name="KLF1_2_4_N"
                     /note="N-terminal domain of Kruppel-like factor (KLF) 1,
                     KLF2, KLF4, and similar proteins; cl41729"
                     /db_xref="CDD:425360"
     Region          209..495
                     /region_name="DegQ"
                     /note="Periplasmic serine protease, S1-C subfamily,
                     contain C-terminal PDZ domain [Posttranslational
                     modification, protein turnover, chaperones]; COG0265"
                     /db_xref="CDD:440035"
ORIGIN      
        1 aptagqagas aadgapgrtq qftkpaepqg hgqghpqgqa hhpqgqaeah hpqdtgpyag
       61 tqppsggega hqphphahqa pppayatahg asdggwggpt ppgygggagg pgdvwgapga
      121 papkkrrngg liaavlvaal vaggigggig fwaanrndtn sttvsasgdp ealnrkptsv
      181 sgiaqkalps vvtieaqgat geggtgtgfv ydkqghiltn nhvvasaaqg grltatfsng
      241 kkydaevigr aqgydvavik lknpsdanlv plplgksanv qvgdatiaig apfglsgtvt
      301 tgiisaknrp vassdgggat psymsalqtd asinpgnsgg plmdatgsvi ginsaiqsag
      361 nggggfgges qsgsiglgfa ipidqakrva gdlikkgqpv ypqigaqvlm rdtgdgatia
      421 reggadgsas vtpkgpadqa glkpgdtitk ldntiidsgp tlistiyqhk pgdkvtltyk
      481 rdgkehtaqv tlgqrtgdk
//
LOCUS       WP_235209352             545 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2079 domain-containing protein [Streptomyces rimosus].
ACCESSION   WP_235209352
VERSION     WP_235209352.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces rimosus
  ORGANISM  Streptomyces rimosus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021379.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09852.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Streptomyces rimosus"
                     /db_xref="taxon:1927"
     Protein         1..545
                     /product="DUF2079 domain-containing protein"
                     /calculated_mol_wt=58249
     Region          24..510
                     /region_name="COG3463"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:442686"
ORIGIN      
        1 miieplvite rtdhprthsg lsglrgklra rlpasswptl lcfavtcglg lqmwhtvgvg
       61 gfdlgifdqg vrayarfelp rseiknvhhe fpplvsllgd hfspvlalla plywvgndpr
      121 vlilaqsalf aagtpvvrrm alrcfahavp atrdraafla alsyavgwpl lmaarngfhe
      181 vafavpltll mlerglarry gavcvcavll cltkedlglv vgvygavllw rnrrggggra
      241 rltgaallvl gpamtavtvg alipamggpr qyywsygevg adfvelahra vtdpgaflav
      301 afgtpvkagl ilwlvatllf lplgsattlc alpliaervl sdnphhwpii hhydafawpf
      361 lltaaaetaa rihraaqgeg rafrrrvavg gvcavglnav vacclglaal vnphhwvpsa
      421 rgqalteaae rvpdgatvea dnnvavrlta rtrtmildaa prgadyvvlq taettfpfts
      481 paqlkqrqel llangyrriw akgdvallcr vdrtavvpgt rvpgpdstpv kdvpdpalgr
      541 slftg
//
LOCUS       WP_235209361             452 aa            linear   BCT 02-MAR-2025
DEFINITION  enolase C-terminal domain-like protein [Streptomyces rimosus].
ACCESSION   WP_235209361
VERSION     WP_235209361.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces rimosus
  ORGANISM  Streptomyces rimosus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 452)
  AUTHORS   Thoden,J.B., Taylor Ringia,E.A., Garrett,J.B., Gerlt,J.A.,
            Holden,H.M. and Rayment,I.
  TITLE     Evolution of enzymatic activity in the enolase superfamily:
            structural studies of the promiscuous o-succinylbenzoate synthase
            from Amycolatopsis
  JOURNAL   Biochemistry 43 (19), 5716-5727 (2004)
   PUBMED   15134446
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024771.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13378.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Streptomyces rimosus"
                     /db_xref="taxon:1927"
     Protein         1..452
                     /product="enolase C-terminal domain-like protein"
                     /calculated_mol_wt=48588
     Region          27..422
                     /region_name="enolase_like"
                     /note="Enolase-superfamily, characterized by the presence
                     of an enolate anion intermediate which is generated by
                     abstraction of the alpha-proton of the carboxylate
                     substrate by an active site residue and is stabilized by
                     coordination to the essential Mg2+ ion; cl40480"
                     /db_xref="CDD:477366"
     Site            order(249,274,297)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:238188"
     Site            order(321,375)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:238188"
ORIGIN      
        1 mdghrlrtet qptppprpag appptpitav hltpvlvadp pllnvqgvhq phtprliiev
       61 ttaggatglg etygdtvyld larpladali grqvtelntl pllaaevcgd spaatgaedv
      121 tagglrgvrt adklrlsvls gfevacldaw grhaglpvha llggkvrdhv eysaylfyrw
      181 aahpggrgep ddwgaaldpp givtqarrfr dtygfrsfkl kggvfepaqe iaairalaaa
      241 fpghplrldp ngawsvptsl hvarelddvl eyledptstt ahmaevasrt dlplatnmcv
      301 ttfaeireaf trdavqvvla dhhywgglrn trelaavcrt fgvalsmhsn thlgislaam
      361 thvaatvpdl ayacdthypw qtedvlterl tfrdgrlpvs dtpglgvtld rdrlaalhar
      421 wladdgtlrd rddaaamraa dpgwvvpqvp rw
//
LOCUS       WP_235209363             487 aa            linear   BCT 02-MAR-2025
DEFINITION  SpoIIE family protein phosphatase, partial [Streptomyces rimosus].
ACCESSION   WP_235209363
VERSION     WP_235209363.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces rimosus
  ORGANISM  Streptomyces rimosus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 487)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Streptomyces rimosus"
                     /db_xref="taxon:1927"
     Protein         1..>487
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
     Region          1..133
                     /region_name="RsbW"
                     /note="Anti-sigma regulatory factor (Ser/Thr protein
                     kinase) [Signal transduction mechanisms]; COG2172"
                     /db_xref="CDD:441775"
     Region          157..>451
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
ORIGIN      
        1 mpgnpraaaa arqfvravla dwlvrslpga dtigdrlade avllvselvt nvvvhagttv
       61 ellcrletep tpdggravvv vevsdhhpar avrarqassa detrghglql vgavaeswgi
      121 tyrrdlktvw frllagphdr vygpparfsq ddpdlqrdlr aaellapapv rrsparrsda
      181 dwinhgalsf laeasdllsg qldeeqvall aaqlvvprla dwcavwlydg gsrdssgapp
      241 rlarvwhsse gridalrmal ekdppvlpvp gpqrdgagaa vpwpwpqeps gygpggaala
      301 crllaggrdq galligragl mrfpdevvgl iedltrrvar avatarayrn qerisqvlqr
      361 rllprgpatv pglessvvye pregawaggd fwdlfdagdg rwcfalgdvc gsgpeaaavt
      421 glarpvlrll ardgygvgev ldrlnktmar eatdsvaava aavaaagpgp daavelraea
      481 eqtrfls
//
LOCUS       WP_235209366             104 aa            linear   BCT 02-MAR-2025
DEFINITION  histidine phosphatase family protein, partial [Streptomyces
            rimosus].
ACCESSION   WP_235209366
VERSION     WP_235209366.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces rimosus
  ORGANISM  Streptomyces rimosus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 104)
  AUTHORS   Rigden,D.J.
  TITLE     The histidine phosphatase superfamily: structure and function
  JOURNAL   Biochem J 409 (2), 333-348 (2008)
   PUBMED   18092946
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012521.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00300.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Streptomyces rimosus"
                     /db_xref="taxon:1927"
     Protein         <1..104
                     /product="histidine phosphatase family protein"
     Region          <3..100
                     /region_name="His_Phos_1"
                     /note="Histidine phosphatase superfamily (branch 1);
                     pfam00300"
                     /db_xref="CDD:459751"
ORIGIN      
        1 rprpdwflft dgvaagppeh pgespeqvga radrvlarie ellrtadgdv vlvghghfqr
       61 vltarrlglp asagalftfe tgtvgvlgee hgrpavvgwn trtl
//
LOCUS       WP_235209253              31 aa            linear   BCT 02-MAR-2025
DEFINITION  putative translational regulatory protein ArgL [Salmonella
            enterica].
ACCESSION   WP_235209253
VERSION     WP_235209253.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 31)
  AUTHORS   Weaver,J., Mohammad,F., Buskirk,A.R. and Storz,G.
  TITLE     Identifying Small Proteins by Ribosome Profiling with Stalled
            Initiation Complexes
  JOURNAL   mBio 10 (2), e02819-18 (2019)
   PUBMED   30837344
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047283.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22864.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..31
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     gene            1..31
                     /gene="argL"
     Protein         1..31
                     /product="putative translational regulatory protein ArgL"
                     /calculated_mol_wt=3563
ORIGIN      
        1 mnnhpykvnf nsmrglshvr evclpftknl f
//
LOCUS       WP_235209423             448 aa            linear   BCT 02-MAR-2025
DEFINITION  alkaline phosphatase PhoX [Methylobacter sp. BBA5.1].
ACCESSION   WP_235209423
VERSION     WP_235209423.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter sp. BBA5.1
  ORGANISM  Methylobacter sp. BBA5.1
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
REFERENCE   1  (residues 1 to 448)
  AUTHORS   Yong,S.C., Roversi,P., Lillington,J., Rodriguez,F., Krehenbrink,M.,
            Zeldin,O.B., Garman,E.F., Lea,S.M. and Berks,B.C.
  TITLE     A complex iron-calcium cofactor catalyzing phosphotransfer
            chemistry
  JOURNAL   Science 345 (6201), 1170-1173 (2014)
   PUBMED   25190793
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017591.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05787.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Methylobacter sp. BBA5.1"
                     /db_xref="taxon:1495064"
     Protein         1..448
                     /product="alkaline phosphatase PhoX"
                     /calculated_mol_wt=48376
     Region          <149..424
                     /region_name="DUF839"
                     /note="Bacterial protein of unknown function (DUF839);
                     cl23843"
                     /db_xref="CDD:474079"
ORIGIN      
        1 mnkifltslp llaavgafhp itsaandvkg pmafkpipgs ayneltndpa ilnestwlip
       61 egfkqsivsd esdlniyinq dwpdmntvne triqagryly rthevrpgnd qrndgklggt
      121 vsvvdlrtgi akelaaredw ealdglvwtp whtllvaeet naggypdpdy platgglvye
      181 ieldkkdpst akkvtarpll gsiahegiet ddegnvyvid edrapggsif kfvpdnygdl
      241 ssgklfalrv knggqtgeae wvelqldpvt fdaqaaaeqv gatsycrped lerigktlya
      301 altceprigg kdgpgavlai slnempmvsy fveagvnmat enkaagitgl kspdnlangp
      361 dgklwivedn vpsdiwvaep dndgdghadg vhlfaslkdn aaegtgiyfg kdpqklfvni
      421 qhsgtgndkt meitkikklh ksdkkhnd
//
LOCUS       WP_235209393             463 aa            linear   BCT 02-MAR-2025
DEFINITION  trypsin-like serine protease, partial [Streptomyces rimosus].
ACCESSION   WP_235209393
VERSION     WP_235209393.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces rimosus
  ORGANISM  Streptomyces rimosus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 463)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Families of serine peptidases
  JOURNAL   Methods Enzymol 244, 19-61 (1994)
   PUBMED   7845208
REFERENCE   2  (residues 1 to 463)
  AUTHORS   Sprang,S., Standing,T., Fletterick,R.J., Stroud,R.M.,
            Finer-Moore,J., Xuong,N.H., Hamlin,R., Rutter,W.J. and Craik,C.S.
  TITLE     The three-dimensional structure of Asn102 mutant of trypsin: role
            of Asp102 in serine protease catalysis
  JOURNAL   Science 237 (4817), 905-909 (1987)
   PUBMED   3112942
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012318.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00089.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Streptomyces rimosus"
                     /db_xref="taxon:1927"
     Protein         1..>463
                     /product="trypsin-like serine protease"
                     /EC_number="3.4.21.-"
                     /GO_function="GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          12..229
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cl21584"
                     /db_xref="CDD:473915"
     Site            order(49,100,177)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(171,198,200)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     Region          246..309
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          401..463
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
ORIGIN      
        1 mltapsanav vgvatkdgsy pftarldigg trscsaalvd eqwlltaasc fadnpaqsle
       61 vpagapkvkt tatvgrtdms resggtvatv eklvprgdrd lvmakldkpv tgiapaevts
      121 kaplpgedvf vsgygrtkde wvpdrlhygr fsvgaakett vgitgkdnga avcegdtgap
      181 vwrdiagrye lvgvssqswq ggcfghddek rtdavasrtd dvagwiqtvr lstkfqnvsd
      241 vltsadfngd grtdvaavmn dgnlhafyak pdgtlqygre lwthdgtwgg yqqliggdfn
      301 gdgqgdiiar rddgqmflyt gtangnlnpr vaawydkswq tmkqivryra dnsgrdglaa
      361 iwgdgslhay takadgtlsg tkrdlwhdks wggmrilssg dfnadgkddi vatdpdggfr
      421 lytgntqgtv trapdlwhdk swssmrallg gdfngdgkad iaa
//
LOCUS       WP_235209424             254 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2272 domain-containing protein [Methylobacter sp. BBA5.1].
ACCESSION   WP_235209424
VERSION     WP_235209424.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter sp. BBA5.1
  ORGANISM  Methylobacter sp. BBA5.1
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021541.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10030.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Methylobacter sp. BBA5.1"
                     /db_xref="taxon:1495064"
     Protein         1..254
                     /product="DUF2272 domain-containing protein"
                     /calculated_mol_wt=28633
     Region          8..248
                     /region_name="COG4322"
                     /note="Uncharacterized protein, contains DUF2272 domain
                     [Function unknown]"
                     /db_xref="CDD:443463"
ORIGIN      
        1 mrgyrhglsl wlilmqvgct lvtagqppri tpnasikpgf aipsirermi ylahqewtif
       61 gqpvadytsq ppvlvfpset tfshetrppf lsrvmlywyt vsslpivgye gelrpwsgaf
      121 iiwlarsagv pekdlpstll hwdyiehals adynarfiar darqyspkpg dllcaprear
      181 fiqqvsafar lrrgpyhcdl vvnrrsdkld liggnvldav slsqaaldne ghviptierp
      241 wqvvieqrdi eskp
//
LOCUS       WP_235209440             483 aa            linear   BCT 02-MAR-2025
DEFINITION  HDOD domain-containing protein [Methylobacter sp. BBA5.1].
ACCESSION   WP_235209440
VERSION     WP_235209440.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter sp. BBA5.1
  ORGANISM  Methylobacter sp. BBA5.1
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020252.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08668.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Methylobacter sp. BBA5.1"
                     /db_xref="taxon:1495064"
     Protein         1..483
                     /product="HDOD domain-containing protein"
                     /calculated_mol_wt=53036
     Region          21..239
                     /region_name="HDOD"
                     /note="HD-like signal output (HDOD) domain, no enzymatic
                     activity [Signal transduction mechanisms]; COG1639"
                     /db_xref="CDD:441246"
     Region          332..482
                     /region_name="GAF"
                     /note="Domain present in phytochromes and cGMP-specific
                     phosphodiesterases; smart00065"
                     /db_xref="CDD:214500"
ORIGIN      
        1 mpvteikpep rsleewtaml rdrdmpifsn tvrsvnniig ddkkgvmela svilqdpnlt
       61 tqllklsnsi yynasrqkma tvsraivllg tevlreltla csfleailsp tnqrraneei
      121 aqaihaavha kalaiathdr speevfvaal lhnignisfw cfcgakgdli qalvkdgssq
      181 qaaekqvlgf tladlggsls kawnlgglie esirknqgav nprvglvhlg yevvealreg
      241 pdtkqygacl ekiaavtkqp kqavrealqk nieaaagiar hfgaheasdl irkeagqpse
      301 petaeaapmt drkqlqfqil qditsilsgr idinllletv legiqrgigm drtlfalltt
      361 dklalrekvs lgwrkdsytq klvfnlaktp pnlffqtlsn hdgcwlnpeq daalftagdt
      421 klvgknpcfl mpvcagdkpi gliycdrayn hqalseddfr afrhfvqqan iglslyrlqg
      481 reg
//
LOCUS       WP_235209442             121 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3450 family protein, partial [Methylobacter sp. BBA5.1].
ACCESSION   WP_235209442
VERSION     WP_235209442.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter sp. BBA5.1
  ORGANISM  Methylobacter sp. BBA5.1
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023358.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11932.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Methylobacter sp. BBA5.1"
                     /db_xref="taxon:1495064"
     Protein         1..>121
                     /product="DUF3450 family protein"
     Region          50..>121
                     /region_name="DUF3450"
                     /note="Protein of unknown function (DUF3450); pfam11932"
                     /db_xref="CDD:432198"
ORIGIN      
        1 mliscrppsc laaamlalca laapgqavsa agaastapqa eapgapdhpl laqyravsrq
       61 taaltiynrh lqdllasqaq ektsleqqlk dievtkqeiv plilhmldsl eqfvrmdlpf
      121 l
//
LOCUS       WP_235209453             121 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3450 family protein, partial [Methylobacter sp. BBA5.1].
ACCESSION   WP_235209453
VERSION     WP_235209453.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter sp. BBA5.1
  ORGANISM  Methylobacter sp. BBA5.1
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023358.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11932.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Methylobacter sp. BBA5.1"
                     /db_xref="taxon:1495064"
     Protein         1..>121
                     /product="DUF3450 family protein"
     Region          50..>121
                     /region_name="DUF3450"
                     /note="Protein of unknown function (DUF3450); pfam11932"
                     /db_xref="CDD:432198"
ORIGIN      
        1 mliscrppsc laaamlalca laapgqavsa agaastapqa eapgapdnpl laqyravsrq
       61 taaltiynrh lqdllasqaq ektsleqqlk dievtkqeiv plilhmldsl eqfvrmdlpf
      121 l
//
LOCUS       WP_235209456             155 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Methylobacter sp. BBA5.1].
ACCESSION   WP_235209456
VERSION     WP_235209456.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter sp. BBA5.1
  ORGANISM  Methylobacter sp. BBA5.1
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024170.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12760.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Methylobacter sp. BBA5.1"
                     /db_xref="taxon:1495064"
     Protein         1..155
                     /product="transposase"
                     /calculated_mol_wt=17375
     Region          13..>154
                     /region_name="InsA"
                     /note="Transposase InsA [Mobilome: prophages,
                     transposons]; COG3677"
                     /db_xref="CDD:442893"
ORIGIN      
        1 mialpqlldn akcfetvral rwpdkvscph cgseaiikqg eddtqperqr ysckacqrkf
       61 ddltgtifag hhqplklwvl clyfmglnls naqiareldl neadvqqmtq qlrsgivskr
      121 pavvlegeve cdevyvvagh kgqpetvkkr pkrla
//
LOCUS       WP_235209488             303 aa            linear   BCT 02-MAR-2025
DEFINITION  alcohol dehydrogenase catalytic domain-containing protein
            [Sphingobium sp. Ant17].
ACCESSION   WP_235209488
VERSION     WP_235209488.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium sp. Ant17
  ORGANISM  Sphingobium sp. Ant17
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (residues 1 to 303)
  AUTHORS   Taneja,B. and Mande,S.C.
  TITLE     Conserved structural features and sequence patterns in the GroES
            fold family
  JOURNAL   Protein Eng 12 (10), 815-818 (1999)
   PUBMED   10556240
REFERENCE   2  (residues 1 to 303)
  AUTHORS   Murzin,A.G.
  TITLE     Structural classification of proteins: new superfamilies
  JOURNAL   Curr Opin Struct Biol 6 (3), 386-394 (1996)
   PUBMED   8804825
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08240.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Sphingobium sp. Ant17"
                     /db_xref="taxon:1461752"
     Protein         1..303
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /calculated_mol_wt=31548
     Region          17..>272
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
ORIGIN      
        1 mvsalrlrfl imgriairaa vveapggpfh fetlamdppg sdqirvrlsa cgichtdmvm
       61 rdgalptplp vilghegagv vdavgsaidg vrvgdhvlls fhscgvcgac hdhqpgycve
      121 fvprnfmgvt qegeggiwrg dqrigsnifg qsafathala hrdnvvridp dlsldilapl
      181 gcgiqtgagt vletlkvapg qsiailggga vglsavmaam iagagrivvi drhssrldla
      241 rtlgatetgd dlasieglfd hivdttgvpa llgpawrnwr saarspwsvp irpaaapsmr
      301 rrs
//
LOCUS       WP_235208882             148 aa            linear   BCT 02-MAR-2025
DEFINITION  cyclic GMP-AMP synthase DncV-like nucleotidyltransferase
            [Pseudomonas savastanoi].
ACCESSION   WP_235208882
VERSION     WP_235208882.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas savastanoi
  ORGANISM  Pseudomonas savastanoi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 148)
  AUTHORS   Govande,A.A., Duncan-Lowey,B., Eaglesham,J.B., Whiteley,A.T. and
            Kranzusch,P.J.
  TITLE     Molecular basis of CD-NTase nucleotide selection in CBASS
            anti-phage defense
  JOURNAL   Cell Rep 35 (9), 109206 (2021)
   PUBMED   34077735
REFERENCE   2  (residues 1 to 148)
  AUTHORS   Kato,K., Ishii,R., Hirano,S., Ishitani,R. and Nureki,O.
  TITLE     Structural Basis for the Catalytic Mechanism of DncV, Bacterial
            Homolog of Cyclic GMP-AMP Synthase
  JOURNAL   Structure 23 (5), 843-850 (2015)
   PUBMED   25865248
REFERENCE   3  (residues 1 to 148)
  AUTHORS   Zhu,D., Wang,L., Shang,G., Liu,X., Zhu,J., Lu,D., Wang,L., Kan,B.,
            Zhang,J.R. and Xiang,Y.
  TITLE     Structural biochemistry of a Vibrio cholerae dinucleotide cyclase
            reveals cyclase activity regulation by folates
  JOURNAL   Mol Cell 55 (6), 931-937 (2014)
   PUBMED   25201413
REFERENCE   4  (residues 1 to 148)
  AUTHORS   Kranzusch,P.J., Lee,A.S.Y., Wilson,S.C., Solovykh,M.S., Vance,R.E.,
            Berger,J.M. and Doudna,J.A.
  TITLE     Structure-guided reprogramming of human cGAS dinucleotide linkage
            specificity
  JOURNAL   Cell 158 (5), 1011-1021 (2014)
   PUBMED   25131990
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF045119.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21654.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Pseudomonas savastanoi"
                     /db_xref="taxon:29438"
     Protein         1..148
                     /product="cyclic GMP-AMP synthase DncV-like
                     nucleotidyltransferase"
                     /calculated_mol_wt=16237
     Region          1..>136
                     /region_name="cGAS"
                     /note="CBASS cGAMP synthase; NF041078"
                     /db_xref="CDD:469005"
ORIGIN      
        1 mpkprfftqg swayktlnsp ahmppqqsdv ddgaylpisf lkgtkrpsaa stiffaaaea
       61 alaelvesrk segwklvtdk ptcirieisn tahidiplys ipddeyvtle kaavkygyds
      121 lldavntrka dnwtsllnrp gflgdsnl
//
LOCUS       WP_235209553             207 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Sphingobium sp.
            Ant17].
ACCESSION   WP_235209553
VERSION     WP_235209553.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium sp. Ant17
  ORGANISM  Sphingobium sp. Ant17
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (residues 1 to 207)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Sphingobium sp. Ant17"
                     /db_xref="taxon:1461752"
     Protein         1..207
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=23063
     Region          <9..>198
                     /region_name="FhuE"
                     /note="Outer membrane receptor for ferric coprogen and
                     ferric-rhodotorulic acid [Inorganic ion transport and
                     metabolism]; COG4773"
                     /db_xref="CDD:443805"
ORIGIN      
        1 mgrlatwfad gsrtnwsrsk sigadwttwp aknttffada tqqlgerwql rvygnytins
       61 sdmrllflsg qpdadtglgm saspsrfdar rkqfdagirl ngsytllgrd helmlgasya
      121 kqdmdffgya rsnvatpgnf ltwdgsyaep twgarshqvd latkqwgyfa strvnladsl
      181 klilggrlns wdrtggyygm aidygir
//
LOCUS       WP_235209577             362 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Sphingobium sp. Ant17].
ACCESSION   WP_235209577
VERSION     WP_235209577.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium sp. Ant17
  ORGANISM  Sphingobium sp. Ant17
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12697.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Sphingobium sp. Ant17"
                     /db_xref="taxon:1461752"
     Protein         1..362
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=38825
     Region          <76..362
                     /region_name="PhaC"
                     /note="Poly-beta-hydroxybutyrate synthase [Lipid transport
                     and metabolism]; COG3243"
                     /db_xref="CDD:442475"
ORIGIN      
        1 mktspsepyt avaqghvapq hgprplplfl nilwretegd pelrrraftg lrryqeaqrp
       61 ptppapdcva avgsarllry gvengrapvv fipslinppq vldlsesrsm lrhicaaghd
      121 aylvdwgapt rgdaamgldg hvterllpll aslprppilv gyclggtlai aaamlrevta
      181 vvaiaspwaf dgfadadrqe igilwrnaka mcerlgyvpm evlqsgfwam dpkrtiqkya
      241 afadmaegsd aaraflaved wanegapltf aaardlfddl yagnatgegr wsvggqminp
      301 kalpcpslsi rsttdrivpa aaapnlaeqr slalghvgmv vggrarpllw dplsdwlssh
      361 gg
//
LOCUS       WP_235209349             267 aa            linear   BCT 02-MAR-2025
DEFINITION  BPL-N domain-containing protein [Streptomyces rimosus].
ACCESSION   WP_235209349
VERSION     WP_235209349.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces rimosus
  ORGANISM  Streptomyces rimosus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 267)
  AUTHORS   Pendini,N.R., Bailey,L.M., Booker,G.W., Wilce,M.C., Wallace,J.C.
            and Polyak,S.W.
  TITLE     Biotin protein ligase from Candida albicans: expression,
            purification and development of a novel assay
  JOURNAL   Arch Biochem Biophys 479 (2), 163-169 (2008)
   PUBMED   18809372
REFERENCE   2  (residues 1 to 267)
  AUTHORS   Cronan,J.E. Jr. and Wallace,J.C.
  TITLE     The gene encoding the biotin-apoprotein ligase of Saccharomyces
            cerevisiae
  JOURNAL   FEMS Microbiol Lett 130 (2-3), 221-229 (1995)
   PUBMED   7649444
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021354.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09825.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Streptomyces rimosus"
                     /db_xref="taxon:1927"
     Protein         1..267
                     /product="BPL-N domain-containing protein"
                     /calculated_mol_wt=28118
     Region          42..238
                     /region_name="COG4285"
                     /note="Uncharacterized conserved protein, conains
                     N-terminal glutamine amidotransferase (GATase1)-like
                     domain [General function prediction only]"
                     /db_xref="CDD:443426"
ORIGIN      
        1 mpdressvgp raavmdrrrl lfgilpaaal lvtgcarsda derkarppla lvyngpqgct
       61 dcapavadll rraprpfevt yvgpgtgkpl tasalaaaql yvqagggadl artwrdlrds
      121 advvrdwira ggsylglcfg gylagrdpgf dllpgdtygy agspgssvpd drdtvvkvdw
      181 qgkprhmyfq dgpafllddg adatvlatye sgaaavvvap ygkgrvgvsg phpeadaswy
      241 aaeelrnpdg vrfdlaheli eattgrr
//
LOCUS       WP_235209596             285 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Sphingobium sp.
            Ant17].
ACCESSION   WP_235209596
VERSION     WP_235209596.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium sp. Ant17
  ORGANISM  Sphingobium sp. Ant17
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Sphingobium sp. Ant17"
                     /db_xref="taxon:1461752"
     Protein         1..285
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=31722
     Region          <4..183
                     /region_name="TPR_MalT"
                     /note="MalT-like TPR region; pfam17874"
                     /db_xref="CDD:436107"
     Region          <224..285
                     /region_name="CitB"
                     /note="DNA-binding response regulator, NarL/FixJ family,
                     contains REC and HTH domains [Signal transduction
                     mechanisms, Transcription]; COG2197"
                     /db_xref="CDD:441799"
ORIGIN      
        1 masgyivnar lraargdlpg alstlndahl vaiecgldrm rafivaeevr llikagqiee
       61 aerhfaagds qldgepiptl hptrrnesia iawlriemqr hrlsrarkva hrwlefvrra
      121 gavrsavtfe lllaeiavlq gnrsearrav rtavemaepa gwvrtfvdeg eviaslltea
      181 yaqgpeletp adrfavrlvs lmrsgpqies deeddddfgl tgrlanrevd ilmmvsgglr
      241 nreigdrlgl tegtvkwymq qiydklgvrr rpqavlrarq lgilp
//
LOCUS       WP_235209602             620 aa            linear   BCT 02-MAR-2025
DEFINITION  TetR family transcriptional regulator [Sphingobium sp. Ant17].
ACCESSION   WP_235209602
VERSION     WP_235209602.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium sp. Ant17
  ORGANISM  Sphingobium sp. Ant17
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012655.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00440.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Sphingobium sp. Ant17"
                     /db_xref="taxon:1461752"
     Protein         1..620
                     /product="TetR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=67334
     Region          22..146
                     /region_name="AcrR"
                     /note="DNA-binding protein, AcrR family, includes nucleoid
                     occlusion protein SlmA [Transcription]; COG1309"
                     /db_xref="CDD:440920"
     Region          238..610
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(314,343,345,364,366,595..598,600,602)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mklmphtdws divatdqsgs vqkildgtlr aigsigarrl smsdiseasg vsrgtlyryf
       61 tskedvlaav seyicssfek giieagqgia dpierfravm rfygrftier spdgifevep
      121 afhlnflrsh fsrhkaavqq aldpvldhfe mltgsrldrd ifcdtmvrlq lstliipatp
      181 qwlaiwngap tgcangrcks patmpntred elmatlakle sttkvgfadk svadalveka
      241 rslrdflqse apagekqrcp tpavdkmlkd egflrllvpq rlggfglspt dfcrvqieia
      301 kgdpaiswvm qiingtswit slapdgvqda vfadgpqtvc gaynppgkar kvdggwiing
      361 kwpymsgsrq stwaqqgvvl edydgpvvpg inmcylpmda mtiedswfvs gmqgtgsdta
      421 iakdvfipda qmalmtertg qidptkrhfg apsdllpavp vvrttgiaql igaveamlei
      481 vraeapkkpv lttiigprts sgaymrdlge aaamidtakl ilfdltakld rvglgeeftm
      541 aekakhraag aqmielvhga seslmfqvgs safaldkpin rywrdvsmat rhiqniptig
      601 yeifgraltg adpisppgay
//
LOCUS       WP_235209693             167 aa            linear   BCT 02-MAR-2025
DEFINITION  OB-fold nucleic acid binding domain-containing protein [Sphingobium
            sp. Ant17].
ACCESSION   WP_235209693
VERSION     WP_235209693.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium sp. Ant17
  ORGANISM  Sphingobium sp. Ant17
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (residues 1 to 167)
  AUTHORS   Koonin,E.V., Wolf,Y.I. and Aravind,L.
  TITLE     Protein fold recognition using sequence profiles and its
            application in structural genomics
  JOURNAL   Adv Protein Chem 54, 245-275 (2000)
   PUBMED   10829230
REFERENCE   2  (residues 1 to 167)
  AUTHORS   Bochkarev,A., Pfuetzner,R.A., Edwards,A.M. and Frappier,L.
  TITLE     Structure of the single-stranded-DNA-binding domain of replication
            protein A bound to DNA
  JOURNAL   Nature 385 (6612), 176-181 (1997)
   PUBMED   8990123
REFERENCE   3  (residues 1 to 167)
  AUTHORS   Keshav,K.F., Chen,C. and Dutta,A.
  TITLE     Rpa4, a homolog of the 34-kilodalton subunit of the replication
            protein A complex
  JOURNAL   Mol Cell Biol 15 (6), 3119-3128 (1995)
   PUBMED   7760808
REFERENCE   4  (residues 1 to 167)
  AUTHORS   Ruff,M., Krishnaswamy,S., Boeglin,M., Poterszman,A., Mitschler,A.,
            Podjarny,A., Rees,B., Thierry,J.C. and Moras,D.
  TITLE     Class II aminoacyl transfer RNA synthetases: crystal structure of
            yeast aspartyl-tRNA synthetase complexed with tRNA(Asp)
  JOURNAL   Science 252 (5013), 1682-1689 (1991)
   PUBMED   2047877
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013499.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01336.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Sphingobium sp. Ant17"
                     /db_xref="taxon:1461752"
     Protein         1..167
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /calculated_mol_wt=18049
     Region          <1..167
                     /region_name="dnaE2"
                     /note="error-prone DNA polymerase; Validated; PRK05672"
                     /db_xref="CDD:235553"
ORIGIN      
        1 mlpamplaeq vatdyqvtrl slkghpmqfl rpafaaegvl scaqasaakn garvqvagvv
       61 lvrqrpgkgn avfitiedet gvanillwar lfemqrravm asrlmlvege iqrskegvvh
      121 lmavrvhdrs dalgrlthsg egtgsppprs athprqvril pgsrdfh
//
LOCUS       WP_235209097             384 aa            linear   BCT 02-MAR-2025
DEFINITION  WXG100 family type VII secretion target [Paenibacillus polymyxa].
ACCESSION   WP_235209097
VERSION     WP_235209097.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus polymyxa
  ORGANISM  Paenibacillus polymyxa
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 384)
  AUTHORS   Sutcliffe,I.C.
  TITLE     New insights into the distribution of WXG100 protein secretion
            systems
  JOURNAL   Antonie Van Leeuwenhoek 99 (2), 127-131 (2011)
   PUBMED   20852931
REFERENCE   2  (residues 1 to 384)
  AUTHORS   Desvaux,M., Hebraud,M., Talon,R. and Henderson,I.R.
  TITLE     Outer membrane translocation: numerical protein secretion
            nomenclature in question in mycobacteria
  JOURNAL   Trends Microbiol 17 (8), 338-340 (2009)
   PUBMED   19674902
REFERENCE   3  (residues 1 to 384)
  AUTHORS   Desvaux,M., Hebraud,M., Talon,R. and Henderson,I.R.
  TITLE     Secretion and subcellular localizations of bacterial proteins: a
            semantic awareness issue
  JOURNAL   Trends Microbiol 17 (4), 139-145 (2009)
   PUBMED   19299134
REFERENCE   4  (residues 1 to 384)
  AUTHORS   Burts,M.L., Williams,W.A., DeBord,K. and Missiakas,D.M.
  TITLE     EsxA and EsxB are secreted by an ESAT-6-like system that is
            required for the pathogenesis of Staphylococcus aureus infections
  JOURNAL   Proc Natl Acad Sci U S A 102 (4), 1169-1174 (2005)
   PUBMED   15657139
REFERENCE   5  (residues 1 to 384)
  AUTHORS   Pallen,M.J.
  TITLE     The ESAT-6/WXG100 superfamily -- and a new Gram-positive secretion
            system?
  JOURNAL   Trends Microbiol 10 (5), 209-212 (2002)
   PUBMED   11973144
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017793.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06013.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Paenibacillus polymyxa"
                     /db_xref="taxon:1406"
     Protein         1..384
                     /product="WXG100 family type VII secretion target"
                     /calculated_mol_wt=40491
     Region          4..89
                     /region_name="EsxA"
                     /note="Secreted virulence factor YukE/EsxA, WXG100 family
                     [Defense mechanisms]; COG4842"
                     /db_xref="CDD:443870"
     Region          309..365
                     /region_name="DUF4258"
                     /note="Domain of unknown function (DUF4258); pfam14076"
                     /db_xref="CDD:464082"
ORIGIN      
        1 mgrilvppdk lmevadqflh gkhemdrmln flsgridfvq qgwsgatrer ffqefqvsrq
       61 smsvtlerls tvaqelifis nnftqvdgek vvldvpgngv piktassgeg wlhkifeqig
      121 kaeitkaeaq leasklqgei fwdtaqgakg aiqedltlgi lpdkerdydh pmaakvgeil
      181 ghvattlqga gevvaglgge glsvavsstg vgsivgvpgl igsaalaahg sttafkgasg
      241 igkssvelwq mtkgegggsa kstpssgakt esvphtqgng etaqigdtfg ksgtlvenpg
      301 tqinwsnssn halermqerg vtkemadswv engkalsqnn gskhlffske gaavvandgt
      361 lvtvipksky ddvykalsks lfge
//
LOCUS       WP_235209707             111 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Sphingobium sp. Ant17].
ACCESSION   WP_235209707
VERSION     WP_235209707.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium sp. Ant17
  ORGANISM  Sphingobium sp. Ant17
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024736.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13340.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Sphingobium sp. Ant17"
                     /db_xref="taxon:1461752"
     Protein         1..111
                     /product="transposase"
                     /calculated_mol_wt=12452
     Region          1..>99
                     /region_name="transpos_IS5_3"
                     /note="IS5 family transposase; NF033580"
                     /db_xref="CDD:468097"
ORIGIN      
        1 mrriepyfpl shgvprvddr rivsgiiyvi khglmwrdap keygphktiy nrfirwsrlg
       61 vfnkifagla akggkpdqlm idathlkahr taasllkkgm fpdvsdapka a
//
LOCUS       WP_235209718             594 aa            linear   BCT 02-MAR-2025
DEFINITION  type IV secretion system DNA-binding domain-containing protein
            [Sphingobium sp. Ant17].
ACCESSION   WP_235209718
VERSION     WP_235209718.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium sp. Ant17
  ORGANISM  Sphingobium sp. Ant17
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (residues 1 to 594)
  AUTHORS   Gomis-Ruth,F.X., Moncalian,G., de la Cruz,F. and Coll,M.
  TITLE     Conjugative plasmid protein TrwB, an integral membrane type IV
            secretion system coupling protein. Detailed structural features and
            mapping of the active site cleft
  JOURNAL   J Biol Chem 277 (9), 7556-7566 (2002)
   PUBMED   11748238
REFERENCE   2  (residues 1 to 594)
  AUTHORS   Gomis-Ruth,F.X., Moncalian,G., Perez-Luque,R., Gonzalez,A.,
            Cabezon,E., de la Cruz,F. and Coll,M.
  TITLE     The bacterial conjugation protein TrwB resembles ring helicases and
            F1-ATPase
  JOURNAL   Nature 409 (6820), 637-641 (2001)
   PUBMED   11214325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021897.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10412.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Sphingobium sp. Ant17"
                     /db_xref="taxon:1461752"
     Protein         1..594
                     /product="type IV secretion system DNA-binding
                     domain-containing protein"
                     /calculated_mol_wt=65749
     Region          70..450
                     /region_name="TrwB_AAD_bind"
                     /note="Type IV secretion-system coupling protein
                     DNA-binding domain; pfam10412"
                     /db_xref="CDD:431268"
ORIGIN      
        1 makktlhafe ayllhgalls giftfvmlgw awfyftrtgr glgsneylrg arfgtirqvk
       61 ralwrqtkgp lvignvpvpe ayepehillc gapgtgktnl ivgmldgirk sgrraivydt
      121 agtfvekfyr qgtdmllnpl dqraarwspw vdvprdyhyd qiaestipdk hgdpfwakaa
      181 rgtlvavmrk larqqhtyvs vlldrllrsk lkdlaafvtg tdaaafiste gertsagiqa
      241 elasamrsfg ylddtedgfs irdwvekgad gswlfitvka dqlpslrpli tvwldiaisa
      301 imsltpdrdr rlycvidelp tlhklpslsd flararkygg cgilgfqsyp qlkatygked
      361 aaaitgycst wvalrandtd taehvsinlg qveqveaneg msygvndmrd gvnlsrmqvt
      421 rplvlstevt nlpnlvgflr fgrnlpvvrf dsrfndvpsl gpaflerttp piqidkagml
      481 vriahaearv reamereatq asspskhgei kpakpsvsse ptttpspqpd mftqpsphid
      541 aqrvedilld denaelpasp rtlwtilagk qgeirsdlvq hgrddgprer arpa
//
LOCUS       WP_235209749             131 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4198 domain-containing protein [Sphingobium sp. Ant17].
ACCESSION   WP_235209749
VERSION     WP_235209749.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium sp. Ant17
  ORGANISM  Sphingobium sp. Ant17
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022135.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10670.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Sphingobium sp. Ant17"
                     /db_xref="taxon:1461752"
     Protein         1..131
                     /product="DUF4198 domain-containing protein"
                     /calculated_mol_wt=14090
     Region          <4..127
                     /region_name="COG5266"
                     /note="Uncharacterized protein, contains GH25 family
                     domain [General function prediction only]"
                     /db_xref="CDD:444079"
ORIGIN      
        1 mptaslaehn wkyavhltkv ptspvplfeg hklqivpvdp aipqkmgepm kvrayyegkp
       61 iagatimsdy vndpdeaavk tgadgtatit lrnqglnvlm giyvgpaddk akvdhveyra
      121 slsfvlphlp e
//
LOCUS       WP_235209781             272 aa            linear   BCT 02-MAR-2025
DEFINITION  N-6 DNA methylase [Sphingobium sp. Ant17].
ACCESSION   WP_235209781
VERSION     WP_235209781.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium sp. Ant17
  ORGANISM  Sphingobium sp. Ant17
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (residues 1 to 272)
  AUTHORS   Schouler,C., Gautier,M., Ehrlich,S.D. and Chopin,M.C.
  TITLE     Combinational variation of restriction modification specificities
            in Lactococcus lactis
  JOURNAL   Mol Microbiol 28 (1), 169-178 (1998)
   PUBMED   9593305
REFERENCE   2  (residues 1 to 272)
  AUTHORS   Schouler,C., Clier,F., Lerayer,A.L., Ehrlich,S.D. and Chopin,M.C.
  TITLE     A type IC restriction-modification system in Lactococcus lactis
  JOURNAL   J Bacteriol 180 (2), 407-411 (1998)
   PUBMED   9440532
REFERENCE   3  (residues 1 to 272)
  AUTHORS   Thorpe,P.H., Ternent,D. and Murray,N.E.
  TITLE     The specificity of sty SKI, a type I restriction enzyme, implies a
            structure with rotational symmetry
  JOURNAL   Nucleic Acids Res 25 (9), 1694-1700 (1997)
   PUBMED   9108149
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02384.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Sphingobium sp. Ant17"
                     /db_xref="taxon:1461752"
     Protein         1..272
                     /product="N-6 DNA methylase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=30025
     Region          85..>203
                     /region_name="HsdM"
                     /note="Type I restriction-modification system, DNA
                     methylase subunit [Defense mechanisms]; COG0286"
                     /db_xref="CDD:440055"
ORIGIN      
        1 mhkphvkama allrrsqprh dlytvfgdcm eamaiamans idlrarepre aryldivgry
       61 preilelfpq llaelvqale agpgdllgtl fheldlhska rgqyftpyal srcmaqatlg
      121 srenveamia qhgfvtamep acgagsmvia laeamrdngh nyqrhlhvta ididpraihm
      181 ayvqlsllhi pahlmvrnal sgetcdhwft pahilggwta rlalrqrrep vaetaqratt
      241 vtaatspsqg avspshepra sqrsmprqls lf
//
LOCUS       WP_235209829             268 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Sphingobium sp.
            Ant17].
ACCESSION   WP_235209829
VERSION     WP_235209829.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium sp. Ant17
  ORGANISM  Sphingobium sp. Ant17
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (residues 1 to 268)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Sphingobium sp. Ant17"
                     /db_xref="taxon:1461752"
     Protein         1..268
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=29188
     Region          <1..268
                     /region_name="TonB-Xanth-Caul"
                     /note="TonB-dependent receptor; TIGR01782"
                     /db_xref="CDD:273804"
ORIGIN      
        1 mtdslvlraa asqtlirpal tdlaykrtas ignfrytdgn pglkptyadq weigvekylg
       61 gggilaasyf wkkikgvvqs rltgevpnvt vynangtvng vydfdvyqpv naegsykvsg
      121 velnavipfg mfadwaegfg vnanatflds sltgqsdlgi ptspigladn tynatlfydr
      181 gplslrvsyn rkgayverie rnmypvyrda ygqfdvaasy qvnrnfrvel qginvgnakt
      241 tgytmdpsfp ttyelsgsri slgvraqf
//
LOCUS       WP_235209934             126 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase, partial [Sphingobium sp. Ant17].
ACCESSION   WP_235209934
VERSION     WP_235209934.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium sp. Ant17
  ORGANISM  Sphingobium sp. Ant17
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (residues 1 to 126)
  AUTHORS   Levitz,R., Chapman,D., Amitsur,M., Green,R., Snyder,L. and
            Kaufmann,G.
  TITLE     The optional E. coli prr locus encodes a latent form of phage
            T4-induced anticodon nuclease
  JOURNAL   EMBO J 9 (5), 1383-1389 (1990)
   PUBMED   1691706
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024565.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13166.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Sphingobium sp. Ant17"
                     /db_xref="taxon:1461752"
     Protein         <1..126
                     /product="AAA family ATPase"
     Region          42..>122
                     /region_name="AAA_13"
                     /note="AAA domain; pfam13166"
                     /db_xref="CDD:463796"
ORIGIN      
        1 krrrrrtssl ilffvffckq mflpkqehgg pkmivcinrl kqfgifndfn gtkiqkfgry
       61 nlvygwngtg kstlsnlfsc felrsmvprf sagqfsvale dgstiteatl hscqlnihvf
      121 nqtlca
//
LOCUS       WP_235209937             434 aa            linear   BCT 02-MAR-2025
DEFINITION  oligogalacturonate lyase family protein [Sphingobium sp. Ant17].
ACCESSION   WP_235209937
VERSION     WP_235209937.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium sp. Ant17
  ORGANISM  Sphingobium sp. Ant17
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (residues 1 to 434)
  AUTHORS   Abbott,D.W., Gilbert,H.J. and Boraston,A.B.
  TITLE     The active site of oligogalacturonate lyase provides unique
            insights into cytoplasmic oligogalacturonate beta-elimination
  JOURNAL   J Biol Chem 285 (50), 39029-39038 (2010)
   PUBMED   20851883
REFERENCE   2  (residues 1 to 434)
  AUTHORS   Garron,M.L. and Cygler,M.
  TITLE     Structural and mechanistic classification of uronic acid-containing
            polysaccharide lyases
  JOURNAL   Glycobiology 20 (12), 1547-1573 (2010)
   PUBMED   20805221
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025934.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14583.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Sphingobium sp. Ant17"
                     /db_xref="taxon:1461752"
     Protein         1..434
                     /product="oligogalacturonate lyase family protein"
                     /GO_function="GO:0047487 - oligogalacturonide lyase
                     activity [Evidence IEA]"
                     /GO_process="GO:0045490 - pectin catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=48059
     Region          <218..433
                     /region_name="Pectate_lyase22"
                     /note="Oligogalacturonate lyase; cl44632"
                     /db_xref="CDD:457977"
ORIGIN      
        1 mmawlgqamt vaiaalvtis apaqsattap apaqwidatt ghrivrvddr pgnyglyfny
       61 npftpdgrqm vyltaegirv adtrdwttrl vlrekvdrll fvgyrsatay yttsptsgta
      121 degasviwsv dlatgqrrri adlpggrias inaddtllag hrelappppa iaaqgkrdpk
      181 tgspgyagfd algrplsfaq akeqwmearl aagvpmeifs idirtgarrt itaskdwlnh
      241 vqfsptdptl lmychegpwh qvdriwtirt dgrdkrkihq rlmqgeiagh eywapdgrti
      301 wydlimpqgv rwlagqdvad gkrrwyalkp tqgsyhfsss pdgrtfsgdg sndgkyislf
      361 hprpddsdra rntlggdtlv atgtletqrl adlakhdytl epnqhftpds kwivyrsnme
      421 gkpaiyavev akar
//
LOCUS       WP_235209938             405 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4055 domain-containing protein [Sphingobium sp. Ant17].
ACCESSION   WP_235209938
VERSION     WP_235209938.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium sp. Ant17
  ORGANISM  Sphingobium sp. Ant17
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024661.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13264.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Sphingobium sp. Ant17"
                     /db_xref="taxon:1461752"
     Protein         1..405
                     /product="DUF4055 domain-containing protein"
                     /calculated_mol_wt=44737
     Region          168..317
                     /region_name="DUF4055"
                     /note="Domain of unknown function (DUF4055); pfam13264"
                     /db_xref="CDD:433070"
ORIGIN      
        1 mfqedpvlvs ptvsvikdsi tydmesiely seklisetlq tnytmigvda pseadkpanl
       61 nganaidlgy hpflvlypfe aildhrvgrv ggkqvfnymk lsdgenayre lqllngiytv
      121 tiyeredgkg eykvrtvvpt rdgkpldfip fklvttkkkd rwpskslldd vvnvncnhyi
      181 legdhasalf ncagpqkvvv npaqrkdeeg npipniypag sdhiweihga ggegqqagvh
      241 flefsgtsvv aireqlkelk sqmsalgsri lqdekaapea aealairrts enaaivtltn
      301 svakdmeevl rwlswwmgaa skndpetrft lnvdlvpakl tpqevteirn lkaaglytek
      361 eafyalragg wqddtlkwea hkaeidaevi dlplalpsts dtgae
//
LOCUS       WP_235209957             431 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Sphingobium sp. Ant17].
ACCESSION   WP_235209957
VERSION     WP_235209957.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium sp. Ant17
  ORGANISM  Sphingobium sp. Ant17
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (residues 1 to 431)
  AUTHORS   Levitz,R., Chapman,D., Amitsur,M., Green,R., Snyder,L. and
            Kaufmann,G.
  TITLE     The optional E. coli prr locus encodes a latent form of phage
            T4-induced anticodon nuclease
  JOURNAL   EMBO J 9 (5), 1383-1389 (1990)
   PUBMED   1691706
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024565.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13166.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Sphingobium sp. Ant17"
                     /db_xref="taxon:1461752"
     Protein         1..431
                     /product="AAA family ATPase"
                     /calculated_mol_wt=48696
     Region          90..>430
                     /region_name="AAA_13"
                     /note="AAA domain; pfam13166"
                     /db_xref="CDD:463796"
ORIGIN      
        1 matavpvcrt arkrsaqvrs wkpgrrrqgc erlanaspvr derkanleqr gprsgdagel
       61 fayylfckqm lpkqehggpk mivcinrlkq fgifndfngt kiqkfgrynl vygwngtgks
      121 tlsnlfscfe lrsmvprfsa gqfsvaledg stiteatlhs cqlnihvfnq rfvhenidwd
      181 ksvksillia kekiddlqkl eklkgelqsk rkahdekqge vkkqrealdk fltnaakkmk
      241 lglqaidtsd syylnydrrk lsnfiqsnge aiikadsvls ddkvidltna akpdqlpsin
      301 fvstsiepdy fkkasgrird ligttavnqa iqrltdnpdi rewvqtglei hknhesqsce
      361 fcgstftqlr aealaahfsk eftdfqrrlq naatwiesqg apanqlpaat efykelsaea
      421 dklqkglrnr c
//
LOCUS       WP_235209963             397 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Sphingobium sp. Ant17].
ACCESSION   WP_235209963
VERSION     WP_235209963.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium sp. Ant17
  ORGANISM  Sphingobium sp. Ant17
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (residues 1 to 397)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 397)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02770.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Sphingobium sp. Ant17"
                     /db_xref="taxon:1461752"
     Protein         1..397
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=43679
     Region          8..382
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(93,122,124,155,157,364..366,368,370)
                     /site_type="active"
                     /db_xref="CDD:173841"
ORIGIN      
        1 msdaldglrq evhewlavha pkdwrahsts eaaflaiqrs wfatlvkggy avphwpegwp
       61 gggrslaeqk viyeefarad tprlllsfms tyhaastlfe wgsaeqqqry iprilegeiw
      121 cqgfsepgag sdlaalrtra erkgdvyvvn gqklwstmgq fadqclllvr tsnegvkqag
      181 ltyllldlka pgvtarpihq ihgdeefaei fldnveipva nrlgeegqgw avaqstlsse
      241 rgltllelsa rmrgamwria dlirtqrrad dagilrdlgk latkidatca vadqflanri
      301 ageekvgdas ivklaysrtl rdftalglri ggldaqyhap itfgggmetg nwmadfmnsy
      361 awtiaggsde vqrniiaerl lgmprepksw tvkesaa
//
LOCUS       WP_235209967              87 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: LysR substrate-binding domain-containing protein
            [unclassified Sphingobium].
ACCESSION   WP_235209967
VERSION     WP_235209967.1
KEYWORDS    RefSeq.
SOURCE      unclassified Sphingobium
  ORGANISM  unclassified Sphingobium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (residues 1 to 87)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="unclassified Sphingobium"
                     /db_xref="taxon:2611147"
     Protein         1..87
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=9066
     Region          <5..79
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mdivprlivn sidatiaaae agvglanlls yqsapriang qlvevladha pspmpvslly
       61 dpgraampav rvfieamreq grqgaws
//
LOCUS       WP_235209992             267 aa            linear   BCT 02-MAR-2025
DEFINITION  TIM barrel protein [Sphingobium sp. Ant17].
ACCESSION   WP_235209992
VERSION     WP_235209992.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium sp. Ant17
  ORGANISM  Sphingobium sp. Ant17
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (residues 1 to 267)
  AUTHORS   Fry,J., Wood,M. and Poole,P.S.
  TITLE     Investigation of myo-inositol catabolism in Rhizobium leguminosarum
            bv. viciae and its effect on nodulation competitiveness
  JOURNAL   Mol Plant Microbe Interact 14 (8), 1016-1025 (2001)
   PUBMED   11497462
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013429.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01261.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Sphingobium sp. Ant17"
                     /db_xref="taxon:1461752"
     Protein         1..267
                     /product="TIM barrel protein"
                     /calculated_mol_wt=29287
     Region          2..226
                     /region_name="AP2Ec"
                     /note="AP endonuclease family 2; These endonucleases play
                     a role in DNA repair. Cleave phosphodiester bonds at
                     apurinic or apyrimidinic sites; the alignment also
                     contains hexulose-6-phosphate isomerases, enzymes that
                     catalyze the epimerization of...; cl23721"
                     /db_xref="CDD:474032"
ORIGIN      
        1 mladigydgl tyavwsgsrw etakrlstvk drfglevfsv yvvidldqgp qhpinagllr
       61 mleemegvka vnlgirtagh gsnhrkapdd kvlqdflgra leicarrgid illyfhlgfw
      121 mdhysiaaqi csvvnhpnlg ivfpsyhwyg yetnagspte gyqavdptpa lmastpfmre
      181 ltlsgatrsp lgwsriatfe aldageldnf allglaksfg ytgpvgydgt lvggnpystl
      241 krsydamdem lglltkhpgw akrethp
//
LOCUS       WP_235210092              96 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GTP-binding protein, partial [Aeromonas].
ACCESSION   WP_235210092
VERSION     WP_235210092.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas
  ORGANISM  Aeromonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae.
REFERENCE   1  (residues 1 to 96)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Aeromonas"
                     /db_xref="taxon:642"
     Protein         1..>96
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>96
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 mskekfernk phvnvgtigh vdhgkttlta aitnvlakhf ggkafafdqi dkapeererg
       61 itintshvey dtatrhyahv dcpghadyvk nmitga
//
LOCUS       WP_235210080             737 aa            linear   BCT 02-MAR-2025
DEFINITION  immune inhibitor A domain-containing protein [Aeromonas media].
ACCESSION   WP_235210080
VERSION     WP_235210080.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas media
  ORGANISM  Aeromonas media
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 737)
  AUTHORS   Arolas,J.L., Goulas,T., Pomerantsev,A.P., Leppla,S.H. and
            Gomis-Ruth,F.X.
  TITLE     Structural Basis for Latency and Function of Immune Inhibitor A
            Metallopeptidase, a Modulator of the Bacillus anthracis Secretome
  JOURNAL   Structure 24 (1), 25-36 (2016)
   PUBMED   26745529
REFERENCE   2  (residues 1 to 737)
  AUTHORS   Fedhila,S., Nel,P. and Lereclus,D.
  TITLE     The InhA2 metalloprotease of Bacillus thuringiensis strain 407 is
            required for pathogenicity in insects infected via the oral route
  JOURNAL   J Bacteriol 184 (12), 3296-3304 (2002)
   PUBMED   12029046
REFERENCE   3  (residues 1 to 737)
  AUTHORS   Grandvalet,C., Gominet,M. and Lereclus,D.
  TITLE     Identification of genes involved in the activation of the Bacillus
            thuringiensis inhA metalloprotease gene at the onset of sporulation
  JOURNAL   Microbiology (Reading) 147 (Pt 7), 1805-1813 (2001)
   PUBMED   11429458
REFERENCE   4  (residues 1 to 737)
  AUTHORS   Charlton,S., Moir,A.J., Baillie,L. and Moir,A.
  TITLE     Characterization of the exosporium of Bacillus cereus
  JOURNAL   J Appl Microbiol 87 (2), 241-245 (1999)
   PUBMED   10475957
REFERENCE   5  (residues 1 to 737)
  AUTHORS   Ogierman,M.A., Fallarino,A., Riess,T., Williams,S.G., Attridge,S.R.
            and Manning,P.A.
  TITLE     Characterization of the Vibrio cholerae El Tor lipase operon lipAB
            and a protease gene downstream of the hly region
  JOURNAL   J Bacteriol 179 (22), 7072-7080 (1997)
   PUBMED   9371455
REFERENCE   6  (residues 1 to 737)
  AUTHORS   Lovgren,A., Zhang,M., Engstrom,A., Dalhammar,G. and Landen,R.
  TITLE     Molecular characterization of immune inhibitor A, a secreted
            virulence protease from Bacillus thuringiensis
  JOURNAL   Mol Microbiol 4 (12), 2137-2146 (1990)
   PUBMED   2089225
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017368.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05547.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Aeromonas media"
                     /db_xref="taxon:651"
     Protein         1..737
                     /product="immune inhibitor A domain-containing protein"
                     /GO_function="GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=80731
     Region          100..732
                     /region_name="Peptidase_M6"
                     /note="Immune inhibitor A peptidase M6; pfam05547"
                     /db_xref="CDD:398926"
ORIGIN      
        1 maapvhgpfd apladevkvl emlkksgrip tlaspemeqa altryyrdks rayngnsgtl
       61 avkegkvrer ilkkirlngt arpgdrvptl llkaiekehy rgkmrkdkil ailvdfpdyp
      121 knsvtpeltk myypdysqah yndllfsskg yagpngerfi smrqfyeqqs gqsysvrgqv
      181 agwytarkda ayygsnqnet avrelvkeal aqvaadpaid laefdqedry dlngngnrde
      241 pdglidhlmi fhssvgeeag ggdlgenaiw ahrwnlgapy pipgtsspng dfggqfaayd
      301 ytiqpidaaa gvcsheyghd lglpdeydtk ysgkgepvat wsimssgswa gviggteptg
      361 fspwakeflq aslggnwlhg snvqladlnp rgnvymldqa ndkgrnddvv rinlpakqvp
      421 lnppyagqyq yhggkgnnld nrmslkldlg grqsasllfk awyqiedgfd ygrvlvngep
      481 ipgnlttsdd pngigfgvgi tgnsngwtda efdltpwagq qitltlqyqs dggvaenglf
      541 vdelqiladg dtllsdgaeg saaftlagfv ksdgneakdh yylaewrnha gvdkglahin
      601 vadqlmryep gmllwyvdss qannwvgqhp gegflgvvdg dqrtltwsdg avagtryqih
      661 daafglgfqr pldlkhpsgs llrdfwitpn rvfkdsrsyq skeipdagrl lpeyglkisv
      721 tgqardmstg riivsrh
//
LOCUS       WP_235210101             174 aa            linear   BCT 02-MAR-2025
DEFINITION  cation:dicarboxylate symporter family transporter, partial
            [Aeromonas media].
ACCESSION   WP_235210101
VERSION     WP_235210101.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas media
  ORGANISM  Aeromonas media
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012593.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00375.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Aeromonas media"
                     /db_xref="taxon:651"
     Protein         1..>174
                     /product="cation:dicarboxylate symporter family
                     transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015293 - symporter activity [Evidence
                     IEA]"
     Region          1..>153
                     /region_name="SDF"
                     /note="Sodium:dicarboxylate symporter family; cl00573"
                     /db_xref="CDD:444986"
ORIGIN      
        1 mykkifssly fqvllaitlg vflghvypdl gadmkplgdg fvklikmiia pvifctvvtg
       61 iagmesmkav gktgaially fevvstialv iglcvvnllq pgvgmnvdpa tldasaisay
      121 aeqaksqgii aflldvipas vigafasgni lqvfanstsk cnsrlkirll sevr
//
LOCUS       WP_235210191             315 aa            linear   BCT 02-MAR-2025
DEFINITION  type IV secretory system conjugative DNA transfer family protein
            [Pseudomonas putida].
ACCESSION   WP_235210191
VERSION     WP_235210191.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas putida
  ORGANISM  Pseudomonas putida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16932.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Pseudomonas putida"
                     /db_xref="taxon:303"
     Protein         1..315
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /calculated_mol_wt=34455
     Region          46..256
                     /region_name="T4SS_TraI"
                     /note="Type IV secretory system, conjugal DNA-protein
                     transfer; pfam16932"
                     /db_xref="CDD:435664"
ORIGIN      
        1 mppltledae rlydkpayvq qqgdtgdaks aveamrdekn qasaargeai ldaalqvgvk
       61 aglawqltni nkalkvrere fdtvydfssl miqdrvvppv itearhlynq dgdytlrlsg
      121 aaykiesqar fssvppswre yltfplpsfd rtslvsalvp rsdeeervwk lavregwkqg
      181 veqanlmlty gfdrmnrdid gmrrfsefar hgqvtlpiis gaaipvtkeg rsmavdetll
      241 ritalpefnd nmnvwrssia tsttadpvrr aaparaanpa pppaaarqpa aaeafaapgg
      301 srlrtqpaag eggpq
//
LOCUS       WP_235209979             224 aa            linear   BCT 02-MAR-2025
DEFINITION  SRPBCC family protein [Sphingobium sp. Ant17].
ACCESSION   WP_235209979
VERSION     WP_235209979.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium sp. Ant17
  ORGANISM  Sphingobium sp. Ant17
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Radauer,C., Lackner,P. and Breiteneder,H.
  TITLE     The Bet v 1 fold: an ancient, versatile scaffold for binding of
            large, hydrophobic ligands
  JOURNAL   BMC Evol Biol 8, 286 (2008)
   PUBMED   18922149
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013044.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00848.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Sphingobium sp. Ant17"
                     /db_xref="taxon:1461752"
     Protein         1..224
                     /product="SRPBCC family protein"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0051537 - 2 iron, 2 sulfur cluster
                     binding [Evidence IEA]"
                     /GO_process="GO:0008152 - metabolic process [Evidence
                     IEA]"
                     /calculated_mol_wt=25272
     Region          14..218
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(17,19,21,28..30,58,81,83,85,87,98,100,102,104,106,
                     116..117,119,121,127,129,131,133,146..150,160..161,
                     164..166,169)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176889"
ORIGIN      
        1 mrellagdgr lkllgyqkvr ydtnwksytd ndgyhapllh qafkmlnwqg gngrqftatk
       61 rghicfesal svahgptvlk dksliefkgq dpavgsrivs lfptfvstkh ldvinlrfat
      121 pidaetvevh yvyfahqddd edmvrhrlrq ssnllgpcgl ismedasifh rihignhtpg
      181 saifqkgvhd plkleseflq ndesgnlprw eyyrsvmgfe raaa
//
LOCUS       WP_235210197              52 aa            linear   BCT 02-MAR-2025
DEFINITION  Abi family protein [Pseudomonas sp. NBRC 111141].
ACCESSION   WP_235210197
VERSION     WP_235210197.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas sp. NBRC 111141
  ORGANISM  Pseudomonas sp. NBRC 111141
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 52)
  AUTHORS   Garvey,P., Fitzgerald,G.F. and Hill,C.
  TITLE     Cloning and DNA sequence analysis of two abortive infection phage
            resistance determinants from the lactococcal plasmid pNP40
  JOURNAL   Appl Environ Microbiol 61 (12), 4321-4328 (1995)
   PUBMED   8534099
REFERENCE   2  (residues 1 to 52)
  AUTHORS   Bidnenko,E., Ehrlich,D. and Chopin,M.C.
  TITLE     Phage operon involved in sensitivity to the Lactococcus lactis
            abortive infection mechanism AbiD1
  JOURNAL   J Bacteriol 177 (13), 3824-3829 (1995)
   PUBMED   7601849
REFERENCE   3  (residues 1 to 52)
  AUTHORS   Anba,J., Bidnenko,E., Hillier,A., Ehrlich,D. and Chopin,M.C.
  TITLE     Characterization of the lactococcal abiD1 gene coding for phage
            abortive infection
  JOURNAL   J Bacteriol 177 (13), 3818-3823 (1995)
   PUBMED   7601848
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019371.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07751.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..52
                     /organism="Pseudomonas sp. NBRC 111141"
                     /db_xref="taxon:1661056"
     Protein         1..52
                     /product="Abi family protein"
                     /calculated_mol_wt=5813
     Region          <2..>45
                     /region_name="Abi_2"
                     /note="Abi-like protein; cl01988"
                     /db_xref="CDD:470424"
ORIGIN      
        1 mrlrelttly dcdrrlslli idaierteva aratiskhmg plhgarlmpi kp
//
LOCUS       WP_235210236             437 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Caballeronia sordidicola].
ACCESSION   WP_235210236
VERSION     WP_235210236.1
KEYWORDS    RefSeq.
SOURCE      Caballeronia sordidicola
  ORGANISM  Caballeronia sordidicola
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Caballeronia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Caballeronia sordidicola"
                     /db_xref="taxon:196367"
     Protein         1..437
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47124
     Region          26..430
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(36..37,40..41,44,86,135..136,138..140,143,163,
                     166..167,170,249,252..253,256..258,261,296,300,354,358,
                     362,378,381..382,385..386,389)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mnsssraige alpletrlnr eqiigfwaaw sgwtldgmds vifalvlvpa lkellplsgf
       61 aatpgvigla gslmfalflv gwgfsyiwgp ladrfgrvrv laattlfyav ftglaaishn
      121 vwelaifrfl agvgvggewa lagtyvaeaw pedrrragag ylqtgyyagf flasalnyti
      181 gtrygwrvmf lcgllpvvva lytllkvrep rkwkrthgda pvsapskrpl rdifskpyrq
      241 rtivnsvlvt vailglwggs iylpsaviql aerqgidgit aiklasatta iysigtiigc
      301 lilpfladry grrptlaayy ataalflvag fgwafylhsg lvpfmalsff iglgggnaam
      361 yalwlpeqyp tsiratafaf stsigrffaa gvslclgmav shfgtlgipi altaslfivg
      421 iitlrwaiet rgqplpd
//
LOCUS       WP_235210239             828 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Caballeronia sordidicola].
ACCESSION   WP_235210239
VERSION     WP_235210239.1
KEYWORDS    RefSeq.
SOURCE      Caballeronia sordidicola
  ORGANISM  Caballeronia sordidicola
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Caballeronia.
REFERENCE   1  (residues 1 to 828)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 828)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 828)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 828)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Caballeronia sordidicola"
                     /db_xref="taxon:196367"
     Protein         1..828
                     /product="ATP-binding protein"
                     /calculated_mol_wt=90376
     Region          61..181
                     /region_name="PAS_2"
                     /note="PAS fold; pfam08446"
                     /db_xref="CDD:400652"
     Region          211..374
                     /region_name="GAF"
                     /note="GAF domain; pfam01590"
                     /db_xref="CDD:460259"
     Region          351..802
                     /region_name="COG4251"
                     /note="Bacteriophytochrome (light-regulated signal
                     transduction histidine kinase) [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443393"
ORIGIN      
        1 mssgpkpvsp dtaamrvqdd rdvsspgldg ttpadgeais gaepayrtlt aesagatnaq
       61 cdaepihipg giqphgyllc lssalaivqa senvaalvgs pveqllgepl dvvigaaaaa
      121 rvahaaatam ldeaplylgv idnplfspre aarehlstat dgpelditmh rhdgnlivel
      181 evarhptadv fasmyplvrt ftrslqdvat ltelvdlavr evramtgfgr vliykfddeg
      241 rshvlaehie dgytsflnql fpasdipsqa ralyvkqrvr lvanvdakaa rlvppvnpat
      301 gratdltyaa lrsfspihle ymrnmgthas msvslvvrgr lwglischdh darlvpfevr
      361 vaiehlgqll slqieakeer aetayllslr rtmsqlmaal aeqddylsvl ksapddllcf
      421 agstgaaivv dgkatlvgst pdtetvlala qwlasstsgv yatdslsqaw prasrhtnta
      481 sgiltvpisq ifrnyviwfr pettrtitwa gepvkrvsdq ggsiaprkdf apwletvrnr
      541 slrwhpvele iagefrlgml nivlrraeel agladelrra nkeleafsys vshdlraplr
      601 hiagygdllr esegetlser skrflnnmle sarfagvlvd dlltfsqmgr aalrpvsvdl
      661 nqlvrsvaqe fsvetanrkv ewiipelptv tgdpaflqia lrnlfsnavk ytrtrdtaki
      721 ellvnstade yiisvrdngv gfnmkyvnkl fgvfqrlhra eefdgtgigl anvrriierh
      781 dgrtwaegre gegaafhfsl pkvfrtesaa tetgvsklrk pgtpsprn
//
LOCUS       WP_235210286             279 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Caballeronia
            sordidicola].
ACCESSION   WP_235210286
VERSION     WP_235210286.1
KEYWORDS    RefSeq.
SOURCE      Caballeronia sordidicola
  ORGANISM  Caballeronia sordidicola
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Caballeronia.
REFERENCE   1  (residues 1 to 279)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 279)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 279)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 279)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Caballeronia sordidicola"
                     /db_xref="taxon:196367"
     Protein         1..279
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=30070
     Region          43..277
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            75..82
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213179"
     Site            order(78..79,81..83,117,187..188,221)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:213179"
     Site            114..117
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213179"
     Site            163..172
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213179"
     Site            183..188
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213179"
     Site            191..194
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213179"
     Site            217..223
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213179"
ORIGIN      
        1 mtssyapyas gnavlegnts gvaarerapa aiaprpqsvd mavalqgvdk hfgerkvlsn
       61 fdfaiergsf vsivgrsgcg kstllrliag lekatggvvq rnaaagasvl etrimfqdar
      121 llpwksvlqn vmlglprssr edaratlaev glsaregdwp aqlsggqrqr valaralvhr
      181 pdlllldepl galdaltrie mhalierlwr ehrftallvt hdvqeavalg erivlieegk
      241 isfdaaitlq rprlrtaegf adleeqvlsr vlrngaqla
//
LOCUS       WP_235210355             243 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerophosphodiester phosphodiesterase family protein
            [Caballeronia sordidicola].
ACCESSION   WP_235210355
VERSION     WP_235210355.1
KEYWORDS    RefSeq.
SOURCE      Caballeronia sordidicola
  ORGANISM  Caballeronia sordidicola
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Caballeronia.
REFERENCE   1  (residues 1 to 243)
  AUTHORS   Kim,H. and Farrand,S.K.
  TITLE     Characterization of the acc operon from the nopaline-type Ti
            plasmid pTiC58, which encodes utilization of agrocinopines A and B
            and susceptibility to agrocin 84
  JOURNAL   J Bacteriol 179 (23), 7559-7572 (1997)
   PUBMED   9393724
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03009.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Caballeronia sordidicola"
                     /db_xref="taxon:196367"
     Protein         1..243
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /GO_function="GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=26601
     Region          1..236
                     /region_name="PI-PLCc_GDPD_SF"
                     /note="Catalytic domain of phosphoinositide-specific
                     phospholipase C-like phosphodiesterases superfamily;
                     cl14615"
                     /db_xref="CDD:472694"
ORIGIN      
        1 mtvqvtkdgv pvlyrpadls sltegqghld eitlndlrkl nagysfsrkd asgqliypyr
       61 akplriptlr ealdtvprnv pimldmkqtp aaplveavar vlddanawsr vrlystdsea
      121 iqlmkahrqa qvfetrdatr drlvdlslgg tcdnpppags wvgielhrqv eviehftlgt
      181 gvskvdarww tpaavkcfkt ngdvkivafg vdsadayaaa selgidavmt dspramrlek
      241 ksq
//
LOCUS       WP_235210369             193 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome c-type biogenesis protein [Caballeronia sordidicola].
ACCESSION   WP_235210369
VERSION     WP_235210369.1
KEYWORDS    RefSeq.
SOURCE      Caballeronia sordidicola
  ORGANISM  Caballeronia sordidicola
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Caballeronia.
REFERENCE   1  (residues 1 to 193)
  AUTHORS   Thony-Meyer,L., Ritz,D. and Hennecke,H.
  TITLE     Cytochrome c biogenesis in bacteria: a possible pathway begins to
            emerge
  JOURNAL   Mol Microbiol 12 (1), 1-9 (1994)
   PUBMED   8057830
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10511314
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Caballeronia sordidicola"
                     /db_xref="taxon:196367"
     Protein         1..193
                     /product="cytochrome c-type biogenesis protein"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /calculated_mol_wt=20667
     Region          71..189
                     /region_name="CcmH"
                     /note="Cytochrome C biogenesis protein; pfam03918"
                     /db_xref="CDD:461092"
     Site            order(86,89)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:319866"
ORIGIN      
        1 mnrivpglcc vlvigvagaa arsgvvmiad adssaqgtah vtveaqvqsn vrsqvdasts
       61 agitanasaa pelagrmrrl essfrclvcq netiadstad laadlrliih eqvqqgatda
      121 qirdymvtry gdfvlydppf ktltwvlwlg pfallalglg vfagivlqrr kmmppkltdl
      181 qqqrarrllg nrt
//
LOCUS       WP_235210478             318 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Caballeronia
            sordidicola].
ACCESSION   WP_235210478
VERSION     WP_235210478.1
KEYWORDS    RefSeq.
SOURCE      Caballeronia sordidicola
  ORGANISM  Caballeronia sordidicola
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Caballeronia.
REFERENCE   1  (residues 1 to 318)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Caballeronia sordidicola"
                     /db_xref="taxon:196367"
     Protein         1..318
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=34246
     Region          3..297
                     /region_name="PRK09791"
                     /note="LysR family transcriptional regulator"
                     /db_xref="CDD:182077"
ORIGIN      
        1 mtqlrvfvav aeagslraaa rslgiaqsgv tqqlrklets aggplfergh rgarltsvge
       61 rlriradvil gecvrtenem rqlrgeltgq vslgaaaeam mrlfpallas frercpridv
      121 hltsatsrvl tawvrdgsld falalvsnea dihdldattl fespvtviar rghplgrars
      181 lralqdcewv strprhagdv anrlstlfed agleppriaa tteavfdtlh cvansdylsl
      241 epvrlaahpf frdhvevvpi keqalstrvc llrragvplt pvaqelasma vsfarmlpgt
      301 ggtgvsgvts vtdkvrsq
//
LOCUS       WP_235210547             145 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3613 domain-containing protein [Caballeronia sordidicola].
ACCESSION   WP_235210547
VERSION     WP_235210547.1
KEYWORDS    RefSeq.
SOURCE      Caballeronia sordidicola
  ORGANISM  Caballeronia sordidicola
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Caballeronia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023687.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12266.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Caballeronia sordidicola"
                     /db_xref="taxon:196367"
     Protein         1..145
                     /product="DUF3613 domain-containing protein"
                     /calculated_mol_wt=14681
     Region          77..126
                     /region_name="DUF3613"
                     /note="Protein of unknown function (DUF3613); pfam12266"
                     /db_xref="CDD:432438"
ORIGIN      
        1 mmnefrtgrg lgrmevltar lvavlcsmai atdaaaqtqt pltsqeppaa lesqqqaqaq
       61 aaapsktvav vrhvtligda tlsilalqrs gqlaappqpm lgaeasaaya rylksfdhpi
      121 pehldssvgt vggatggsig sgtsn
//
LOCUS       WP_235210533             471 aa            linear   BCT 02-MAR-2025
DEFINITION  cache domain-containing protein [Caballeronia sordidicola].
ACCESSION   WP_235210533
VERSION     WP_235210533.1
KEYWORDS    RefSeq.
SOURCE      Caballeronia sordidicola
  ORGANISM  Caballeronia sordidicola
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Caballeronia.
REFERENCE   1  (residues 1 to 471)
  AUTHORS   Upadhyay,A.A., Fleetwood,A.D., Adebali,O., Finn,R.D. and
            Zhulin,I.B.
  TITLE     Cache Domains That are Homologous to, but Different from PAS
            Domains Comprise the Largest Superfamily of Extracellular Sensors
            in Prokaryotes
  JOURNAL   PLoS Comput Biol 12 (4), e1004862 (2016)
   PUBMED   27049771
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028509.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17200.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Caballeronia sordidicola"
                     /db_xref="taxon:196367"
     Protein         1..471
                     /product="cache domain-containing protein"
                     /calculated_mol_wt=51077
     Region          54..195
                     /region_name="sCache_2"
                     /note="Single Cache domain 2; pfam17200"
                     /db_xref="CDD:435780"
     Region          207..460
                     /region_name="ComP"
                     /note="Signal transduction histidine kinase ComP [Signal
                     transduction mechanisms]; COG4585"
                     /db_xref="CDD:443642"
ORIGIN      
        1 mqlslhgmrr kwlvlallpf igamatiava vslqasslst seqraiaaay rsskevelkn
       61 yvalaesava plynsgrddp etraqvlavl sklefgndgy ffvydlqgnl lmhprqselv
      121 gtnlwsmhdp ngaltiqsll kkarngggfv eylwerpsth klesklgyvv tferwgwmvg
      181 tgiylddvnm allqtgrqas snirhtlfli gligalgmgf icacgialnv tdhrssdaql
      241 kimarqvves qeaergrlsr elhdgisqml vsiklllesa lalkpsnsdr ndasgppiqn
      301 alaqtnrtla eirqishdlr pamlddlglg aalrqlalef nemgktphtn iavdaassda
      361 hplpdavnta lfrvaqealt niqrhahass aritlacapg qviltivddg igfgydavqs
      421 dprrgiglrn mrerveslng tfviqsrqge telkaiipvg lpsiasgrar t
//
LOCUS       WP_235210550              48 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Caballeronia
            sordidicola].
ACCESSION   WP_235210550
VERSION     WP_235210550.1
KEYWORDS    RefSeq.
SOURCE      Caballeronia sordidicola
  ORGANISM  Caballeronia sordidicola
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Caballeronia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..48
                     /organism="Caballeronia sordidicola"
                     /db_xref="taxon:196367"
     Protein         1..48
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=5231
     Region          <4..43
                     /region_name="PRK13503"
                     /note="HTH-type transcriptional activator RhaS"
                     /db_xref="CDD:184094"
ORIGIN      
        1 mslsieriay rngfndaahf srrfraafgm sprdfrhgdg galarsts
//
LOCUS       WP_235210563             385 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Caballeronia sordidicola].
ACCESSION   WP_235210563
VERSION     WP_235210563.1
KEYWORDS    RefSeq.
SOURCE      Caballeronia sordidicola
  ORGANISM  Caballeronia sordidicola
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Caballeronia.
REFERENCE   1  (residues 1 to 385)
  AUTHORS   Todone,F., Vanoni,M.A., Mozzarelli,A., Bolognesi,M., Coda,A.,
            Curti,B. and Mattevi,A.
  TITLE     Active site plasticity in D-amino acid oxidase: a crystallographic
            analysis
  JOURNAL   Biochemistry 36 (19), 5853-5860 (1997)
   PUBMED   9153426
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013434.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01266.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Caballeronia sordidicola"
                     /db_xref="taxon:196367"
     Protein         1..385
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=41582
     Region          32..355
                     /region_name="thiamin_ThiO"
                     /note="glycine oxidase ThiO; TIGR02352"
                     /db_xref="CDD:274092"
ORIGIN      
        1 mntvvhsths raswrddfav vggglcgrlv awllagaghr valydrgdaa gtqsaawvaa
       61 amlaplaeaa saellitelg aaslerwpgf iadmpepvff qrngtlvvwh agdraeaplf
      121 errlranaps elfrdgfvkl sgaqvaaaep slgtrfpqgw llpnegqldn rqvlsalaaa
      181 laerhvdlhw nttidthtsp dahfvidcrg lggkpawpal rgirgevarv hapgigltrp
      241 vrllhprypl yiapkqddly vigatevege dmspmtvrsa lellsaafav hpgfgearil
      301 elnsqcrptl pdhrpaivwd gartlrvngl yrhgymiape vadsaralae allggaitdp
      361 dsfddwrrqa rwsallrceh aasvl
//
LOCUS       WP_235210564             238 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Caballeronia sordidicola].
ACCESSION   WP_235210564
VERSION     WP_235210564.1
KEYWORDS    RefSeq.
SOURCE      Caballeronia sordidicola
  ORGANISM  Caballeronia sordidicola
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Caballeronia.
REFERENCE   1  (residues 1 to 238)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 238)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Caballeronia sordidicola"
                     /db_xref="taxon:196367"
     Protein         1..238
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=26424
     Region          92..>202
                     /region_name="AspB"
                     /note="Aspartate/methionine/tyrosine aminotransferase
                     [Amino acid transport and metabolism]; COG0436"
                     /db_xref="CDD:440205"
ORIGIN      
        1 msatllgirq lrdtsparle dmidgltasr fcvlqsrfsv eklgrallkh gpehefaary
       61 lmcssdpesm sitdllafep gsmegpgslr lgyteypgal elrrelatly esidmdnliv
      121 htgaqeaifs fvhsmfragd hmivhmpgyq shdsiaeagg vsawpwlage senwaldpda
      181 leklecfcae vlertgvlll pstlldhgde hfriglgrrn lpdvlkifen ylrergtk
//
LOCUS       WP_235210717             429 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Caballeronia
            sordidicola].
ACCESSION   WP_235210717
VERSION     WP_235210717.1
KEYWORDS    RefSeq.
SOURCE      Caballeronia sordidicola
  ORGANISM  Caballeronia sordidicola
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Caballeronia.
REFERENCE   1  (residues 1 to 429)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Caballeronia sordidicola"
                     /db_xref="taxon:196367"
     Protein         1..429
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=47431
     Region          108..394
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(208,215,218..219,221..222,225,233,235,237,281,
                     317..318,337..338,344..345,347..348,366)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176106"
     Site            order(209,258,305..306,315)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:176106"
ORIGIN      
        1 mvetdettkk harwrddlda kkhpqqigri dpanprlatn rnlqtglvcp irrscalhgr
       61 sgsrrlrsra cfrvcerpcp evrtssatla wiplesfhqs qspesrrrnv emnirqlqyf
      121 lavaaelnft raservniaq palsaqiisl eeelgtalft rekrkvlltp ageilvehaq
      181 rvlntasaam aavrasgrga qahlmvgsiy taiycflpnt lrlfkelaph sdvslqemti
      241 sqqinalkeg aievglvrgh iydhsivtel lyrellvvav pagseydvpd avelkelatw
      301 pliavargta tergygdril dmfedenckp tiakeahdmh tsaclvaagm gvavvpaimq
      361 lmqplgvayr plnaqtpgvs lslawhkdrv pallgpwrea aranaaklie khpqlfldts
      421 rqqvveqet
//
LOCUS       WP_235210790             244 aa            linear   BCT 02-MAR-2025
DEFINITION  SIR2 family protein [Burkholderia pseudomallei].
ACCESSION   WP_235210790
VERSION     WP_235210790.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024685.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13289.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..244
                     /product="SIR2 family protein"
                     /calculated_mol_wt=27419
     Region          62..220
                     /region_name="SIR2"
                     /note="SIR2 superfamily of proteins includes silent
                     information regulator 2 (Sir2) enzymes which catalyze
                     NAD+-dependent protein/histone deacetylation, where the
                     acetyl group from the lysine epsilon-amino group is
                     transferred to the ADP-ribose moiety of NAD+; cl00195"
                     /db_xref="CDD:444738"
ORIGIN      
        1 mftflsertr apststqlrt yalqvwgala eeigqvfsrf nansatkaiy kdflkhhfrr
       61 fdtvvsfnyd tifenslpar rsaryvglrd sagtipllkp hgsvnwvqad dgtitvgnpv
      121 gpavivapth lkfisdpdqk evqhpgyldq aheiqkiwae meremrfars lvfigysfpv
      181 adlyfasvlr svladrdttp nivivnpdav aiserllrrf plvtvsrffd laqfiragra
      241 viaq
//
LOCUS       WP_417281872             529 aa            linear   BCT 02-MAR-2025
DEFINITION  hypothetical protein [Amnibacterium endophyticum].
ACCESSION   WP_417281872
VERSION     WP_417281872.1
KEYWORDS    RefSeq.
SOURCE      Amnibacterium endophyticum
  ORGANISM  Amnibacterium endophyticum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Amnibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Amnibacterium endophyticum"
                     /db_xref="taxon:2109337"
     Protein         1..529
                     /product="hypothetical protein"
                     /calculated_mol_wt=54051
     Region          <2..498
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
ORIGIN      
        1 mrrprlvlpa lavvaalglg gctaegapqp trtttppata vrfapqtagd pavvdaatap
       61 eravqasraf feaspgavva pdgdraaqer aaevaerlhv pvllapapap sasashapsa
      121 sptptatpta tptatptasp spdltavsag lrrlgavwva gdaaprlpgv rryaladapd
      181 vtapatsaav avaadegadt aatataraag atvvssggsr ipgasaavvd alskaegepa
      241 aligsrfagl gdaaswavaa arggyqysgg gqvpfdgkrl fvalygvpgd salgvlgeqg
      301 pgatiarvea lakryapltd rhvapmleii atvasgsptd ngdyssdldv srlepfvdaa
      361 akagmpvvld lqpgradfls qaklyrslle kpnvglaldp ewrlkpgqrp lvqigsvsaa
      421 evnrtsawla dlvkekglpp kpfvlhqfrl dmlpdrsaid vsrpeldvli hvdgqgsqpa
      481 kqatwaaihr dapdvawgwk nfldedhptl tpaqtmeqvh ptpdlityq
//
LOCUS       WP_235210864             628 aa            linear   BCT 02-MAR-2025
DEFINITION  carotenoid oxygenase family protein [Nocardia brasiliensis].
ACCESSION   WP_235210864
VERSION     WP_235210864.1
KEYWORDS    RefSeq.
SOURCE      Nocardia brasiliensis
  ORGANISM  Nocardia brasiliensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 628)
  AUTHORS   Nicoletti,A., Wong,D.J., Kawase,K., Gibson,L.H., Yang-Feng,T.L.,
            Richards,J.E. and Thompson,D.A.
  TITLE     Molecular characterization of the human gene encoding an abundant
            61 kDa protein specific to the retinal pigment epithelium
  JOURNAL   Hum Mol Genet 4 (4), 641-649 (1995)
   PUBMED   7633413
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015043.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03055.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Nocardia brasiliensis"
                     /db_xref="taxon:37326"
     Protein         1..628
                     /product="carotenoid oxygenase family protein"
                     /GO_function="GO:0016702 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of two atoms of oxygen [Evidence IEA]"
                     /calculated_mol_wt=68928
     Region          18..>128
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Region          18..>60
                     /region_name="PasT"
                     /note="Ribosome association toxin PasT (RatA) of the RatAB
                     toxin-antitoxin module [Translation, ribosomal structure
                     and biogenesis]; COG2867"
                     /db_xref="CDD:442114"
     Region          186..626
                     /region_name="COG3670"
                     /note="Carotenoid cleavage dioxygenase or a related enzyme
                     [Secondary metabolites biosynthesis, transport and
                     catabolism]"
                     /db_xref="CDD:442887"
ORIGIN      
        1 msdlyvpqip dnlnvrfven rivverpaqv vydwattwsn lpkwlpfasg tevrrgtdgv
       61 paelgdvlle yifpelnekp keytvvarvp gklwtvvgrd ildggapasa mhaiatfttf
      121 dlgdgttlfc rlfqrlipdt eppgphpved paqvqpglel lkahsrghcr ssrsrghpmn
      181 ndttlakpyl tghyqpvpde vtahnlpvrg tiptelngry frnghnpkpg dtpthwfkga
      241 gmlhglrlrd gqaewyrnrw vktpaldgap yiredgsidl tasvagthii ehagrilalq
      301 esnlpfevtp eldtfgaydf ggklktamta hpkvdpvtge lhffayspva prliyyiasa
      361 agdlrhqqvv egagpslmhd faitehyavw ldlsvtfnpa etsgipyrwd dayqarigil
      421 prtstgpvrw fdvepgamlh vsnayedaag rvvvegprld rsawetswkw wvgapgyptd
      481 pvagalqyrw vlepgqatar eemmdslvte fptinddylg rrnrysyava ypgsghdgvg
      541 ivkydndtgt rllaptgagr ipgeavfvpa adatdeddgy lltlvgdrag kasellvlda
      601 rdftappiaa velprhvpgg ihgswiad
//
LOCUS       WP_235210910             283 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Nocardia brasiliensis].
ACCESSION   WP_235210910
VERSION     WP_235210910.1
KEYWORDS    RefSeq.
SOURCE      Nocardia brasiliensis
  ORGANISM  Nocardia brasiliensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 283)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 283)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Nocardia brasiliensis"
                     /db_xref="taxon:37326"
     Protein         1..283
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=30607
     Region          1..281
                     /region_name="PRK05866"
                     /note="SDR family oxidoreductase"
                     /db_xref="CDD:235631"
ORIGIN      
        1 marrlvrral grvadfvnrp vpvrrakvee pvsgkrilit gasagigraa avaaaaagae
       61 vvlvarrepe lallsdeirs aggkavyrtc dltdddevda lldwvrtsvg rvdvlvnnag
      121 rsirrpites fdrmhdfrrt mginyfgpvq ltlgllpgml esgrgqivnv gtwtvptgts
      181 prfaayqssk taltafgrcv daelsgrgva vtsvhyplvh tamsaptpey qklpgltpqe
      241 aaewiltair hrpvqvipry vpvlwamrvs gprtvgrvll rwg
//
LOCUS       WP_235210746             668 aa            linear   BCT 02-MAR-2025
DEFINITION  arabinofuranosidase catalytic domain-containing protein
            [Caballeronia sordidicola].
ACCESSION   WP_235210746
VERSION     WP_235210746.1
KEYWORDS    RefSeq.
SOURCE      Caballeronia sordidicola
  ORGANISM  Caballeronia sordidicola
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Caballeronia.
REFERENCE   1  (residues 1 to 668)
  AUTHORS   Miyanaga,A., Koseki,T., Matsuzawa,H., Wakagi,T., Shoun,H. and
            Fushinobu,S.
  TITLE     Crystal structure of a family 54 alpha-L-arabinofuranosidase
            reveals a novel carbohydrate-binding module that can bind arabinose
  JOURNAL   J Biol Chem 279 (43), 44907-44914 (2004)
   PUBMED   15292273
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020768.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09206.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Caballeronia sordidicola"
                     /db_xref="taxon:196367"
     Protein         1..668
                     /product="arabinofuranosidase catalytic domain-containing
                     protein"
                     /GO_function="GO:0046556 - alpha-L-arabinofuranosidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0031221 - arabinan metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=67878
     Region          55..476
                     /region_name="ArabFuran-catal"
                     /note="Alpha-L-arabinofuranosidase B, catalytic;
                     pfam09206"
                     /db_xref="CDD:430465"
ORIGIN      
        1 mtvalaacng dssgtsasqa tgvantsasl taaaqsndst stdaatdaar asplpcdaaa
       61 aantpcsaah svtrlltkny rgplfqvqra sdnttldvyp ytsanlpnga dhalinsanv
      121 ksadsfcnnt tcsvtylydq idlvaplkgg afgnvpatlt lnangteslt vpststaaqk
      181 attvpvlngf atitlpgtsg tltvqllqpp tplttqsptl qvsigndlpa lpgtpaklgf
      241 vplqgaqipa lgtlagqayr nrfgtvnqsi gdtdiaeymv agahysqsst ccgtygnmes
      301 sanpstyahg evegemfala fsngnaavfg ycdgnssqap nvkdpvcnal dinwpgvdae
      361 agvylygpqq ppkekfvtvl skyspvaasn ifvvkggsas qnvltalydq appealnfgn
      421 daghafngqw qgglslgegg dasgapvqff egaiitkats dltdnaiqss iasfygppad
      481 kataacyann lvnsplslat pdawaqqngg tavpatdvsg vnkgaatvts tngssvsnir
      541 eiirvqggqs ysftdyvlat tnatvfpggs iqtddsngse fawvlntntg aivrgtwgsg
      601 qatsltavks gnwwkvtmtl tapagsnnaq vfidpptssa agvrsqqtay lsathycpsl
      661 aivtasgt
//
LOCUS       WP_235210977             370 aa            linear   BCT 02-MAR-2025
DEFINITION  terpene synthase family protein [Nocardia brasiliensis].
ACCESSION   WP_235210977
VERSION     WP_235210977.1
KEYWORDS    RefSeq.
SOURCE      Nocardia brasiliensis
  ORGANISM  Nocardia brasiliensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040195.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19086.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Nocardia brasiliensis"
                     /db_xref="taxon:37326"
     Protein         1..370
                     /product="terpene synthase family protein"
                     /calculated_mol_wt=41133
     Region          61..322
                     /region_name="Isoprenoid_Biosyn_C1"
                     /note="Isoprenoid Biosynthesis enzymes, Class 1; cl00210"
                     /db_xref="CDD:469660"
     Site            order(65,85,88..89,92,96,200,233..234,237,241,245)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:173830"
     Site            order(92..93,96,237..238,241,245)
                     /site_type="active"
                     /note="substrate-Mg2+ binding site [active]"
                     /db_xref="CDD:173830"
     Site            92..96
                     /site_type="other"
                     /note="aspartate-rich region 1"
                     /db_xref="CDD:173830"
     Site            237..245
                     /site_type="other"
                     /note="aspartate-rich region 2"
                     /db_xref="CDD:173830"
ORIGIN      
        1 mffrersagd glggalnipp iwcplelfsy gdglsfqlgs eeffrrmgvg adllssarrm
       61 ctgdlacmyg ptadeegvql msdwlmwall fddyycddgp yawdptaynh vvlnlmqysm
      121 dpergpigdr afdsfaaalg dimarvrart saehamlvsm ahfqwalgag cgvsdrsgny
      181 mrsldehmia rgsdgaylvt iplieviggt cldfttrnlp evraitdaag llfnvstdip
      241 syarerdqrs lesnvvgiia aenrcsrqea iyracalvee itelfvtleq klataghpal
      301 rdyvkhlshm vrgtlewqrr lpryyasldg tghpvstgrl sddaihdvsp trlftritpp
      361 asirwwwnfi
//
LOCUS       WP_235210094              92 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: pirin family protein [Aeromonas].
ACCESSION   WP_235210094
VERSION     WP_235210094.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas
  ORGANISM  Aeromonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae.
REFERENCE   1  (residues 1 to 92)
  AUTHORS   Pang,H., Bartlam,M., Zeng,Q., Miyatake,H., Hisano,T., Miki,K.,
            Wong,L.L., Gao,G.F. and Rao,Z.
  TITLE     Crystal structure of human pirin: an iron-binding nuclear protein
            and transcription cofactor
  JOURNAL   J Biol Chem 279 (2), 1491-1498 (2004)
   PUBMED   14573596
REFERENCE   2  (residues 1 to 92)
  AUTHORS   Orzaez,D., de Jong,A.J. and Woltering,E.J.
  TITLE     A tomato homologue of the human protein PIRIN is induced during
            programmed cell death
  JOURNAL   Plant Mol Biol 46 (4), 459-468 (2001)
   PUBMED   11485202
REFERENCE   3  (residues 1 to 92)
  AUTHORS   Dechend,R., Hirano,F., Lehmann,K., Heissmeyer,V., Ansieau,S.,
            Wulczyn,F.G., Scheidereit,C. and Leutz,A.
  TITLE     The Bcl-3 oncoprotein acts as a bridging factor between
            NF-kappaB/Rel and nuclear co-regulators
  JOURNAL   Oncogene 18 (22), 3316-3323 (1999)
   PUBMED   10362352
REFERENCE   4  (residues 1 to 92)
  AUTHORS   Wendler,W.M., Kremmer,E., Forster,R. and Winnacker,E.L.
  TITLE     Identification of pirin, a novel highly conserved nuclear protein
  JOURNAL   J Biol Chem 272 (13), 8482-8489 (1997)
   PUBMED   9079676
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014708.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02678.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Aeromonas"
                     /db_xref="taxon:642"
     Protein         1..92
                     /product="pirin family protein"
                     /calculated_mol_wt=10103
     Region          13..>75
                     /region_name="YhaK"
                     /note="Redox-sensitive bicupin YhaK, pirin superfamily
                     [General function prediction only]; COG1741"
                     /db_xref="CDD:441347"
ORIGIN      
        1 mkelafikrs ngqhwvgdgf pvrsifsynd iaeemspfll mdyagpanfp atshqlgvgq
       61 hphrgfetvt ivyeggglpq rllggrrhhr sg
//
LOCUS       WP_235211034             481 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein, partial
            [Nocardia brasiliensis].
ACCESSION   WP_235211034
VERSION     WP_235211034.1
KEYWORDS    RefSeq.
SOURCE      Nocardia brasiliensis
  ORGANISM  Nocardia brasiliensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Nocardia brasiliensis"
                     /db_xref="taxon:37326"
     Protein         1..>481
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          3..>372
                     /region_name="CydD"
                     /note="ABC-type transport system involved in cytochrome bd
                     biosynthesis, ATPase and permease components [Energy
                     production and conversion, Posttranslational modification,
                     protein turnover, chaperones]; COG4988"
                     /db_xref="CDD:444012"
ORIGIN      
        1 marppvdprl wryarsarry lvlsvllslv itgsivvaav llarvlagvv tepgqrtlga
       61 wsteilvlav vlgvrvlatw wqsrlghrag agvvaeleta vltagaqlrp reletrrtel
      121 avvvgtglsg lrgyltgylp alllavpvpp ivlaviaihd pisglivvvt lplipifmil
      181 iglltqgrae atlaattrls dqlldlfagm ptlralgret gavsrdrisg dggsrrtggv
      241 radgsgtaea daadsaelrr ttmvprvrel gdalrqrtmr alriaflssm vlemlatlsv
      301 aliavsiglr lvfgemslya glvalilape vylplrmvge rfhaaqdgma aadrafaile
      361 sesgaidssa sadeggtvaa ggphaggara sdassdrsdv dgvaglldrv ggpghsgvhg
      421 vaarnsrdka ssgmsvasay gpvgglrdpd agagaatvvg seavsdgesa msagahlggs
      481 e
//
LOCUS       WP_235211046             306 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Burkholderia
            pseudomallei].
ACCESSION   WP_235211046
VERSION     WP_235211046.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 306)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..306
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=33358
     Region          83..275
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(99..100,102..103,106,110,112..118,204..209,215..216,
                     218..219)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176102"
ORIGIN      
        1 mnlvhprdad derrehgrre phpdqadgap sgvsgsprpg atrptstpat segetylgya
       61 trivadirqm adavrasrsv prgllrvnam lgfgrttitp lvsefatphp rvevrldvtd
      121 rpvdrvdggs dlairfgepp dtrlnarrim snrrllrasp vylqrrgapa slarcivhrr
      181 nddahgvwrf vrdgeaegvk vraapssndg divpgwaldg hgilirsewd lakylesgrl
      241 rrvlpeyalp sadlsacypv rrnpsarara pidflvarlg asapapartp eggrragsrd
      301 vpprvr
//
LOCUS       WP_235211062              77 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF746 domain-containing protein [Burkholderia pseudomallei].
ACCESSION   WP_235211062
VERSION     WP_235211062.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 77)
  AUTHORS   Rigden,D.J.
  TITLE     Ab initio modeling led annotation suggests nucleic acid binding
            function for many DUFs
  JOURNAL   OMICS 15 (7-8), 431-438 (2011)
   PUBMED   21348639
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017182.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05344.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..77
                     /product="DUF746 domain-containing protein"
                     /calculated_mol_wt=8492
     Region          <1..48
                     /region_name="DUF746"
                     /note="Domain of Unknown Function (DUF746); pfam05344"
                     /db_xref="CDD:283095"
ORIGIN      
        1 mqvadlvgts hgmvrkwhsm ftdfadrlep sgslsarirl rsnsadlpdf fgpfqswrta
       61 svasveqyrc lnssgvr
//
LOCUS       WP_235211087             416 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Nocardia brasiliensis].
ACCESSION   WP_235211087
VERSION     WP_235211087.1
KEYWORDS    RefSeq.
SOURCE      Nocardia brasiliensis
  ORGANISM  Nocardia brasiliensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Nocardia brasiliensis"
                     /db_xref="taxon:37326"
     Protein         <1..416
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          22..399
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(32..33,36..37,40,74,124..125,127..129,132,152,
                     155..156,159,231,234..235,238..240,243,270,274,324..325,
                     329,333,349,352..353,356..357,360)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 rseaviagsg aardrlpatg viglcalivv aegydlimyg amlpalldet gwgmtkstag
       61 tvgsmvyvgm tagaltggrl adrfgrrrpl lvavgwftgw taacglagsv aqlgafrlla
      121 gigmgaaaav alalakeyta pgrtsltvtv lmagipiggi tsalaglall sehgwrplcw
      181 igaigsalvl liaivllpes refartrtps rvrelftapr gpmtilfava afaelltwyg
      241 lntwittlmr elrypmtsal qfsltlnsga vigsfalaaa avrwgarpva svsacvaaam
      301 vaacatglsd rllllaviaa lgaaahstln linaavaday padlrgsalg wsngvgrlga
      361 vaaptlggwv laatgplqvf qtfiltsvca alvlaaltrt grasrpapvd rarvag
//
LOCUS       WP_235211095             280 aa            linear   BCT 02-MAR-2025
DEFINITION  LLM class flavin-dependent oxidoreductase [Nocardia brasiliensis].
ACCESSION   WP_235211095
VERSION     WP_235211095.1
KEYWORDS    RefSeq.
SOURCE      Nocardia brasiliensis
  ORGANISM  Nocardia brasiliensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012517.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00296.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Nocardia brasiliensis"
                     /db_xref="taxon:37326"
     Protein         1..280
                     /product="LLM class flavin-dependent oxidoreductase"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /calculated_mol_wt=29487
     Region          4..251
                     /region_name="Flavin_utilizing_monoxygenases"
                     /note="Flavin-utilizing monoxygenases; cl19096"
                     /db_xref="CDD:450250"
ORIGIN      
        1 mfrpqnpper lravtrvaee sglaqlwlwe dcffesgias aaaalawter lhigigllpv
       61 plrnvaltam eaatlhrlfp ervllgvghg vldwmgqvga rvespvtlla eyldalrall
      121 agqrvttsgr yvqledvald wpplappriy agargprsir lcgshadgtl ldsiagpdsv
      181 raaralideg raaagrtdrh vvvanllavt gpdaaarlah vqatttppla gvagdaqava
      241 davralaeag adtvviqptg depdpegfvr fvaeqvrpli
//
LOCUS       WP_235211129             259 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2071 domain-containing protein [Nocardia brasiliensis].
ACCESSION   WP_235211129
VERSION     WP_235211129.1
KEYWORDS    RefSeq.
SOURCE      Nocardia brasiliensis
  ORGANISM  Nocardia brasiliensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021371.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09844.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Nocardia brasiliensis"
                     /db_xref="taxon:37326"
     Protein         1..259
                     /product="DUF2071 domain-containing protein"
                     /calculated_mol_wt=28130
     Region          26..251
                     /region_name="DUF2071"
                     /note="Uncharacterized conserved protein (COG2071);
                     cl01329"
                     /db_xref="CDD:470161"
ORIGIN      
        1 mwtrdvelpt vrggfpelsg vierrllvny rvdpaviarv lpaplrpqlv gewavagicl
       61 irlgqlrpsg lprwvglrse naahrvavew dgpggrgtgv yiprrdtgsv lnvlvggrlf
      121 pgdheharfr vretaddvqv afasrdsatk vhvdvrrttg wpgselfadl aqaseffrrg
      181 sagysatrgg aelaglelrt dawqvepvev aavhstffdd aevfppgsaq ldgallmrdv
      241 pvtwhplapl plaargrnr
//
LOCUS       WP_235211159             289 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Nocardia
            brasiliensis].
ACCESSION   WP_235211159
VERSION     WP_235211159.1
KEYWORDS    RefSeq.
SOURCE      Nocardia brasiliensis
  ORGANISM  Nocardia brasiliensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Nocardia brasiliensis"
                     /db_xref="taxon:37326"
     Protein         1..289
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=30758
     Region          63..274
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mthplrrvas slvlavtaat lsvsathsep aaaryaaqeq rpsaidrhdd rtpdrietts
       61 gsaisvvlad nhaifrsglr aaigtqpdie cvaeadhsaa avreierlrp dvalldldlp
      121 gferpaavda iaalggstri ltltssdsde nlyralclga tgflvktlpa dglisairma
      181 argdalidph ltrrlvtrlt tgiepfpsap evetltareh qvllliakay tnpeiaavlg
      241 vgeqtvkthv snvlaklgvr drvhaavyah trrivplphq pwlpdpvra
//
LOCUS       WP_235211221             486 aa            linear   BCT 02-MAR-2025
DEFINITION  M14 family zinc carboxypeptidase, partial [Nocardia brasiliensis].
ACCESSION   WP_235211221
VERSION     WP_235211221.1
KEYWORDS    RefSeq.
SOURCE      Nocardia brasiliensis
  ORGANISM  Nocardia brasiliensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012471.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00246.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Nocardia brasiliensis"
                     /db_xref="taxon:37326"
     Protein         <1..486
                     /product="M14 family zinc carboxypeptidase"
                     /GO_function="GO:0004181 - metallocarboxypeptidase
                     activity [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          77..252
                     /region_name="Peptidase_M14_like"
                     /note="M14 family of metallocarboxypeptidases and related
                     proteins; cl11393"
                     /db_xref="CDD:472171"
ORIGIN      
        1 rnepcmteln rrtllsltal acatlaagcg redtpdatde varivgrvep lnafptvdel
       61 nseidrlvaa apdrlritei grsragdpir svqvgtgern ilvfgsphan epigmatiah
      121 lvsrlaadet rsagatwhfv lcidpdgtrl negwfagprt rtdvarhfyr ptvteqpewa
      181 fpitwrgtav gtpmpetral mtlidrtrpa liaslhnadf gggffytsgg dqsywsaltd
      241 sltaadvpiy tgapdapggr awapgvfeip lfdrmasvlt evgvdpvaal ggggsrdyaa
      301 pygtavlvse lplwvdpria dkapsdrsrg dlfaatatay relaattres lervadrldg
      361 stplersvra tladlpnmat ekenspdpdr patlgeifve nyvwlgmfrl rvggmmcrvl
      421 ddlaarrpdd aqvaaerery gaifdqwsae verhapgrpv plerlveiqs raivtavlra
      481 qagqpi
//
LOCUS       WP_235211279              37 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein [Nocardia brasiliensis].
ACCESSION   WP_235211279
VERSION     WP_235211279.1
KEYWORDS    RefSeq.
SOURCE      Nocardia brasiliensis
  ORGANISM  Nocardia brasiliensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..37
                     /organism="Nocardia brasiliensis"
                     /db_xref="taxon:37326"
     Protein         1..37
                     /product="phosphopantetheine-binding protein"
                     /calculated_mol_wt=4076
     Region          <3..35
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; cl09936"
                     /db_xref="CDD:447865"
ORIGIN      
        1 marltalled amgveislat iydhpdidrl veylamr
//
LOCUS       WP_235211327             174 aa            linear   BCT 02-MAR-2025
DEFINITION  thioredoxin fold domain-containing protein [Enterobacter sp.
            UCD-UG_FMILLET].
ACCESSION   WP_235211327
VERSION     WP_235211327.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter sp. UCD-UG_FMILLET
  ORGANISM  Enterobacter sp. UCD-UG_FMILLET
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13098.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Enterobacter sp. UCD-UG_FMILLET"
                     /db_xref="taxon:1542468"
     Protein         1..174
                     /product="thioredoxin fold domain-containing protein"
                     /calculated_mol_wt=18574
     Region          <38..174
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 mktmlailca tslstfaatd ntpqdafndi assltdlqpi tfqapaekyk llvfidnqci
       61 ycsnvvknvk qytdagltms fltvapnair dsviedmgcv wcstdkvksl qqamagflpd
      121 ndtttacsdl iarqsalaer lgisitpvmv viepesrsii gsqspaaila tlnk
//
LOCUS       WP_235211416             143 aa            linear   BCT 02-MAR-2025
DEFINITION  SOS response-associated peptidase family protein [Sphingopyxis sp.
            LC363].
ACCESSION   WP_235211416
VERSION     WP_235211416.1
KEYWORDS    RefSeq.
SOURCE      Sphingopyxis sp. LC363
  ORGANISM  Sphingopyxis sp. LC363
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingopyxidaceae; Sphingopyxis.
REFERENCE   1  (residues 1 to 143)
  AUTHORS   Aravind,L., Anand,S. and Iyer,L.M.
  TITLE     Novel autoproteolytic and DNA-damage sensing components in the
            bacterial SOS response and oxidized methylcytosine-induced
            eukaryotic DNA demethylation systems
  JOURNAL   Biol Direct 8, 20 (2013)
   PUBMED   23945014
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014626.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02586.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Sphingopyxis sp. LC363"
                     /db_xref="taxon:1120705"
     Protein         1..143
                     /product="SOS response-associated peptidase family
                     protein"
                     /GO_function="GO:0003697 - single-stranded DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006974 - DNA damage response [Evidence
                     IEA]"
                     /calculated_mol_wt=16354
     Region          <5..123
                     /region_name="SRAP"
                     /note="SOS response associated peptidase (SRAP); cl03646"
                     /db_xref="CDD:470848"
ORIGIN      
        1 mteiemvkav wgsdprfsdg inyrfvraeg rafparrcli pasefrmgtg dhryrvtlds
       61 gnffylaavw dppladwpls yriltipaga dvipyqsrhg viiqrrdanh wldgslpnel
      121 lfeepprrtl fveplrkqae lpl
//
LOCUS       WP_235210131             116 aa            linear   BCT 02-MAR-2025
DEFINITION  SET domain-containing protein-lysine N-methyltransferase [Pandoraea
            pnomenusa].
ACCESSION   WP_235210131
VERSION     WP_235210131.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea pnomenusa
  ORGANISM  Pandoraea pnomenusa
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 116)
  AUTHORS   Marmorstein,R.
  TITLE     Structure of SET domain proteins: a new twist on histone
            methylation
  JOURNAL   Trends Biochem Sci 28 (2), 59-62 (2003)
   PUBMED   12575990
REFERENCE   2  (residues 1 to 116)
  AUTHORS   Min,J., Zhang,X., Cheng,X., Grewal,S.I. and Xu,R.M.
  TITLE     Structure of the SET domain histone lysine methyltransferase Clr4
  JOURNAL   Nat Struct Biol 9 (11), 828-832 (2002)
   PUBMED   12389037
REFERENCE   3  (residues 1 to 116)
  AUTHORS   Huang,S., Shao,G. and Liu,L.
  TITLE     The PR domain of the Rb-binding zinc finger protein RIZ1 is a
            protein binding interface and is related to the SET domain
            functioning in chromatin-mediated gene expression
  JOURNAL   J Biol Chem 273 (26), 15933-15939 (1998)
   PUBMED   9632640
REFERENCE   4  (residues 1 to 116)
  AUTHORS   Cui,X., De Vivo,I., Slany,R., Miyamoto,A., Firestein,R. and
            Cleary,M.L.
  TITLE     Association of SET domain and myotubularin-related proteins
            modulates growth control
  JOURNAL   Nat Genet 18 (4), 331-337 (1998)
   PUBMED   9537414
REFERENCE   5  (residues 1 to 116)
  AUTHORS   Tripoulas,N., LaJeunesse,D., Gildea,J. and Shearn,A.
  TITLE     The Drosophila ash1 gene product, which is localized at specific
            sites on polytene chromosomes, contains a SET domain and a PHD
            finger
  JOURNAL   Genetics 143 (2), 913-928 (1996)
   PUBMED   8725238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013052.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00856.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Pandoraea pnomenusa"
                     /db_xref="taxon:93220"
     Protein         1..116
                     /product="SET domain-containing protein-lysine
                     N-methyltransferase"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=12840
     Region          <33..85
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
ORIGIN      
        1 magllssqrk lhtlqvsett hlydphfsgl llhscapssv ldmkrleifa lrdisagefl
       61 tidyacteev larqfscecg apncrrwitg frelpdqegq krlaapavep arqilp
//
LOCUS       WP_235211466             696 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Sphingopyxis sp.
            LC363].
ACCESSION   WP_235211466
VERSION     WP_235211466.1
KEYWORDS    RefSeq.
SOURCE      Sphingopyxis sp. LC363
  ORGANISM  Sphingopyxis sp. LC363
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingopyxidaceae; Sphingopyxis.
REFERENCE   1  (residues 1 to 696)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Sphingopyxis sp. LC363"
                     /db_xref="taxon:1120705"
     Protein         1..696
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=75372
     Region          3..692
                     /region_name="Zn_piracy_ZnuD"
                     /note="zinc piracy TonB-dependent receptor ZnuD; NF038289"
                     /db_xref="CDD:468454"
ORIGIN      
        1 mkfrvlllsa avpavvphia fagetvpavk saagpdagfm qagstadpei vvsanvlglr
       61 adetatpvit ltgeelvhrr qatlgdtlag qpginfdnfg ggasrpvirg qtaprvqals
      121 dgasihdasa ispdhavtte plllrgievl rgpsallygg saiggainll dekvptsipe
      181 ggiagtvegr fgtaddersl vggitiggqg lalrvegvhr ssndyrvpkg fgerhvdgsy
      241 ndtstftvgg swvgsggylg vaytrqrsey glpghshdye gchphgsslh cgghghdded
      301 hdhdhdhdhe heevpfvklr serfdirsey edplpgfekv rfrlsftdye hdeiehdeva
      361 ttfsnkahel rfelahkpig plrgafgvqh seskfsavge eaflpesetr ntalflmetl
      421 dagparfela arqewqriet tlnrevshkp fsisgaaiwd iggdyslals larsqrapnv
      481 qelyargihl atntyelgta tlgketgksi dltfrkikga ttftiaayhq dfdnyifant
      541 ldrfedfrli rytaadatft gvdgevrhdf gtvgvslfgd yvrakfkgdl gnlpripagr
      601 lgaradgrwg plsgdveyyh ifeqdriaaf etrtsgydml natlayklal gpkadaelfv
      661 ratnltnela ynhasfikna splrgrnfvf glrtsl
//
LOCUS       WP_235211478             139 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Sphingopyxis sp. LC363].
ACCESSION   WP_235211478
VERSION     WP_235211478.1
KEYWORDS    RefSeq.
SOURCE      Sphingopyxis sp. LC363
  ORGANISM  Sphingopyxis sp. LC363
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingopyxidaceae; Sphingopyxis.
REFERENCE   1  (residues 1 to 139)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 139)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Sphingopyxis sp. LC363"
                     /db_xref="taxon:1120705"
     Protein         1..139
                     /product="VOC family protein"
                     /calculated_mol_wt=14583
     Region          11..136
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mdtppfslra idhvvlrvvd vgrmvafyre vigctdertq aeiglyqlra ggslidlvtv
       61 dgklgamgga apgaegrnvd hfaiaitpfd daairahldr hgvaveqagp rygaegegps
      121 iyiadpegni velkgpafd
//
LOCUS       WP_235211535             393 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: tyrosine-type recombinase/integrase [unclassified
            Sphingopyxis].
ACCESSION   WP_235211535
VERSION     WP_235211535.1
KEYWORDS    RefSeq.
SOURCE      unclassified Sphingopyxis
  ORGANISM  unclassified Sphingopyxis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingopyxidaceae; Sphingopyxis.
REFERENCE   1  (residues 1 to 393)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 393)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="unclassified Sphingopyxis"
                     /db_xref="taxon:2614943"
     Protein         1..393
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=41043
     Region          177..383
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(192,206..207,300,302,333,368)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:271180"
     Site            order(206,333,336,359,368)
                     /site_type="active"
                     /db_xref="CDD:271180"
ORIGIN      
        1 mtelaplpss lelvlsahgr lvdwskakpl aieaaadama patkaaivad lkcylrwcll
       61 qrpiatavpa apetlvlylr wlarstetra aakpatlarr lasiarvhri lgfgdsealp
      121 tqagmvrdtl kgirrkagvr qrqaaplrlg rampepgaps saepepdgeg epggltiesl
      181 laacstdlvg lrdaalcsma ydgglrvsel vaatvadlrl mtdgsgrlti prsktdqega
      241 gaivwlsaet mdrlsawlta sgiadgpvfr rinilthkga degetvlshh igghaltrqg
      301 vvsilrrraa aaieeghavv epgqdavaal sahsfrvglt qdlfaagedg agialalrws
      361 spttalgyar elaagsnaaa rvigrmrrge aka
//
LOCUS       WP_235211598             175 aa            linear   BCT 02-MAR-2025
DEFINITION  LacI family DNA-binding transcriptional regulator [Sphingopyxis sp.
            LC363].
ACCESSION   WP_235211598
VERSION     WP_235211598.1
KEYWORDS    RefSeq.
SOURCE      Sphingopyxis sp. LC363
  ORGANISM  Sphingopyxis sp. LC363
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingopyxidaceae; Sphingopyxis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012576.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00356.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Sphingopyxis sp. LC363"
                     /db_xref="taxon:1120705"
     Protein         1..175
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=18562
     Region          3..>175
                     /region_name="PurR"
                     /note="DNA-binding transcriptional regulator, LacI/PurR
                     family [Transcription]; COG1609"
                     /db_xref="CDD:441217"
ORIGIN      
        1 mlrptsfdva eragvsqstv sralrgspgv naetrarvaa aarelgyvvd rhasslrlks
       61 setialvtic rpgedrsain pfyfallgsi aaatsargfn llvsfqened nfradfvasg
      121 ladamivigt tsnraawkyf aeaqasgldf vcwgspgspf hwmrsendig gqlaa
//
LOCUS       WP_235211634            1006 aa            linear   BCT 02-MAR-2025
DEFINITION  PAS domain-containing protein [Janthinobacterium sp. RA13].
ACCESSION   WP_235211634
VERSION     WP_235211634.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. RA13
  ORGANISM  Janthinobacterium sp. RA13
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (residues 1 to 1006)
  AUTHORS   Hefti,M.H., Francoijs,K.J., de Vries,S.C., Dixon,R. and Vervoort,J.
  TITLE     The PAS fold. A redefinition of the PAS domain based upon
            structural prediction
  JOURNAL   Eur J Biochem 271 (6), 1198-1208 (2004)
   PUBMED   15009198
REFERENCE   2  (residues 1 to 1006)
  AUTHORS   Ponting,C.P. and Aravind,L.
  TITLE     PAS: a multifunctional domain family comes to light
  JOURNAL   Curr Biol 7 (11), R674-R677 (1997)
   PUBMED   9382818
REFERENCE   3  (residues 1 to 1006)
  AUTHORS   Zhulin,I.B., Taylor,B.L. and Dixon,R.
  TITLE     PAS domain S-boxes in Archaea, Bacteria and sensors for oxygen and
            redox
  JOURNAL   Trends Biochem Sci 22 (9), 331-333 (1997)
   PUBMED   9301332
REFERENCE   4  (residues 1 to 1006)
  AUTHORS   Borgstahl,G.E., Williams,D.R. and Getzoff,E.D.
  TITLE     1.4 A structure of photoactive yellow protein, a cytosolic
            photoreceptor: unusual fold, active site, and chromophore
  JOURNAL   Biochemistry 34 (19), 6278-6287 (1995)
   PUBMED   7756254
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020037.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08448.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Janthinobacterium sp. RA13"
                     /db_xref="taxon:1502762"
     Protein         1..1006
                     /product="PAS domain-containing protein"
                     /calculated_mol_wt=112290
     Region          <115..192
                     /region_name="PDC1_DGC_like"
                     /note="first PDC (PhoQ/DcuS/CitA) domain of
                     diguanylate-cyclase and similar domains; cd12914"
                     /db_xref="CDD:350339"
     Region          194..287
                     /region_name="PDC2_DGC_like"
                     /note="second PDC (PhoQ/DcuS/CitA) domain of
                     diguanylate-cyclase and similar domains; cd12915"
                     /db_xref="CDD:350340"
     Region          359..450
                     /region_name="PAS_4"
                     /note="PAS fold; pfam08448"
                     /db_xref="CDD:312075"
     Region          453..712
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          592..>1000
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 miaitrplqr larrlyrisl vplfalilll alwaavfyqv gqerasavrd avavsqslar
       61 tladhtsftl rqtdhatqlf klkyeetggg lrlneftrrq glldsvlpsk lelpialida
      121 hgnvldsaha ylpenlatqp ffralaanas dtalvdtpml dadgkrwtir larrlndarg
      181 rfagaivihv dptyfvddyd rlnldeqgal mlvardsglt vgrigeqlil sdridfrmpg
      241 ppqhaaeell ieppvdatqr iysyhelpry pllavvgvsr tvalarfehr rlvyvgalla
      301 asvliagfta llmrqsarlr rsirqatetq allraahqgs ldavlllkaw rsapgkpved
      361 ftfadinera admlgkprse llgqrvlplm pllrgerffk rfvlvmetgq pledefelpl
      421 asggtrwlrh qvvpitdgva vtsrdisark hdelalqdnr sflqslidhl pvlvyvksar
      481 penfgqmevw nkaaeditgh laadvigktd cqafppdfgl hdaeddrail aergvidhte
      541 kplrlpdgsl rylhavsvpv fderqqiehi lgiaedisqr rqqelelrqk qaelaavnda
      601 splglvrldr qrrctyvnrt fesitglpra aalgagwtsa lhpddyplmh valeqltrsh
      661 apfqstlrcl qrdgrlvwvs vkiapilidg qiegyvgtld dittlresev allesearlr
      721 tiadtlpami ayidadqvyr flniayeref gltgrlvlgk svrdtvgear ygtvapyier
      781 vlagetlsfe eeddkegier cmeviyipqi gedklqvvgf hvmrqditvq krekqrllkl
      841 aqvdaltgls nragfqqkls damhasrqqq hlmavmymdi drfkpvndth ghgtgdallr
      901 afaqrltqtm ratdiiarlg gdeftiimeq itrpddaavl aekivaamqq pfeldgitvr
      961 isasiglafy rdedispavl lqradvllyk akqdgrntyr agalta
//
LOCUS       WP_235211665             516 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Janthinobacterium sp. RA13].
ACCESSION   WP_235211665
VERSION     WP_235211665.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. RA13
  ORGANISM  Janthinobacterium sp. RA13
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (residues 1 to 516)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Janthinobacterium sp. RA13"
                     /db_xref="taxon:1502762"
     Protein         1..516
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=54472
     Region          <164..506
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(293..294,297..298,301,304..305,307..308,311,
                     314..315,318,321..322,325..326,329,332..333,335..336,340,
                     342..343,346,349..350,353..354,357,360,363..364,367,371,
                     374,381,385,388,391..392,395,398..399,402..403,405..406,
                     409..410,423..424,427,430..431,434,437..438,440..441,
                     444..445,448,451..452,455,458..459,461..462,465..466,
                     468..469,472,475..476,479,482..483)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            363..396
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 mkiaqkmliv pvvalaclla mgalsyfamq qneqrmrelk dvtltaerla sqqaialgqv
       61 hadvyakiai aaslseeqfk qfgaqtdgql naiaqglkel qkfsgaatea gqalpgiery
      121 rasvaqaldl asmdpntgva amqnaaghyq qvrgqlrqvl lnldhrtvda lqetknagqr
      181 agwlslgtma igfallalia twvarsvvrp iddacraaes laagdlttri eaqgddevgk
      241 lsralatvlk nwntllgeir qagstitvea seialgnadl sartesqahs lqetatsmha
      301 ltdtvrenas hahqanqmvl stsnvalegg rvvgqvvetm gsikassgri vdiiavidgi
      361 afqtnilaln aaveaarage qgrgfavvat evrglaqrsa taareikqli edsvarietg
      421 seladsagrt mgdivasvqq vteimndita asqrqskgie evnnaitemd eltqrnaalv
      481 eqsaaaaqsm qdqahdllrv vdafrlgdgg ppllpr
//
LOCUS       WP_235211761             933 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Janthinobacterium sp. RA13].
ACCESSION   WP_235211761
VERSION     WP_235211761.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. RA13
  ORGANISM  Janthinobacterium sp. RA13
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (residues 1 to 933)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..933
                     /organism="Janthinobacterium sp. RA13"
                     /db_xref="taxon:1502762"
     Protein         1..933
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=103603
     Region          14..309
                     /region_name="TauA"
                     /note="ABC-type nitrate/sulfonate/bicarbonate transport
                     system, periplasmic component [Inorganic ion transport and
                     metabolism]; COG0715"
                     /db_xref="CDD:440479"
     Region          246..930
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mpmkapdafr ccfflllclv tparalepvs lhlnfthqfq fagyyaaieq gyyreaglev
       61 klveggggqi aeaavlagra eygvgnstll lsrlagkpvv vlavvfqhsp svllmrqqgg
      121 apdvrklvga pvmigaasdv alasdevslf lakmgvapqq mrhlppsyri edfingkvda
      181 iaaystnepd yldragfpyy qftprtagid fygdnlftse qelrrhperv kafraaslrg
      241 wqyamahree maqlihakys qrhdrahlly eaqqmelllq pvlvelgymn pqrwqhiadt
      301 yasmgvlprh atdsraykgf lyrpvpgadl gwlylslgla gsllavsaaf hfnnlarerr
      361 rteetirqge lrfrtmfeea pmgialidtv sgqfldinpr ylaisgrsle hmkqtswmei
      421 shpddvagel eqvaqllars lhgfrhakri vrpdggvvwv dasvtaiata rhgephhlcm
      481 ledvtdkrqt ealiwqqanf dtltqlpnrr mfherlrqal aqgrrdasrv ailfidldhf
      541 kevndtlghh qgdillieaa rrirvgvret dtvarlggde ftvilsdldd lqqvdriarq
      601 ildgllapfl lgqeqafvsa sigitlypdd agniedllkq adqamyvskg agrnrysyft
      661 pamqvaavnr mrlgadlrta lreqqmqlyy qpivelhsgk lakaeallrw qhpqrgvvcp
      721 pdflalaess gliveigdwv lhtaaaqllr wraqgqaigl pglqlclnqs plelqrevea
      781 pgtwlrqlma ldvpasaivl dmredvllpn gnsmaprlqh lreaglqial ddfgsghasl
      841 tqlqqcgidy lkldgmlvrk ladgsselvl ceaivtmahk lglqviaegv etqaqralll
      901 eigcdfaqge lfapplsiea fdallhaqrp lhp
//
LOCUS       WP_235211802             209 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF5610 domain-containing protein [unclassified
            Janthinobacterium].
ACCESSION   WP_235211802
VERSION     WP_235211802.1
KEYWORDS    RefSeq.
SOURCE      unclassified Janthinobacterium
  ORGANISM  unclassified Janthinobacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037817.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18433.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="unclassified Janthinobacterium"
                     /db_xref="taxon:2610881"
     Protein         1..209
                     /product="DUF5610 domain-containing protein"
                     /calculated_mol_wt=21828
     Region          66..184
                     /region_name="DUF5610"
                     /note="Domain of unknown function (DUF5610); pfam18433"
                     /db_xref="CDD:436498"
ORIGIN      
        1 msipiaasgn snpsvtsvst gvagkddkvq qkdginaems vndrtklqln asimqaslnv
       61 sigsenepla llyktaitni nealksqygd daiqnaasqd nsaeatasri vslstgffda
      121 ykkqnpgmdd dtaltkfmdt isggmekgfk eardileglk vlggdiagni dktyelvqkg
      181 yadfiaahss kkddaakpda skpadskaa
//
LOCUS       WP_235211840             214 aa            linear   BCT 02-MAR-2025
DEFINITION  FecR domain-containing protein [Janthinobacterium sp. RA13].
ACCESSION   WP_235211840
VERSION     WP_235211840.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. RA13
  ORGANISM  Janthinobacterium sp. RA13
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (residues 1 to 214)
  AUTHORS   Van Hove,B., Staudenmaier,H. and Braun,V.
  TITLE     Novel two-component transmembrane transcription control: regulation
            of iron dicitrate transport in Escherichia coli K-12
  JOURNAL   J Bacteriol 172 (12), 6749-6758 (1990)
   PUBMED   2254251
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04773.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Janthinobacterium sp. RA13"
                     /db_xref="taxon:1502762"
     Protein         1..214
                     /product="FecR domain-containing protein"
                     /calculated_mol_wt=22692
     Region          <2..202
                     /region_name="PRK09774"
                     /note="fec operon regulator FecR; Reviewed"
                     /db_xref="CDD:236622"
ORIGIN      
        1 madyrtavnq rrvvtladgt qltlntssav nivydgaqrr iellageifi atgkdgeqrp
       61 ffvgtphgsl qalgtrftvr lhegyasagv legavavlad dgaqrlvlrp gegahfdgtg
      121 ahrqalapyg ggwlngmlva rdmrladfla dlsrysdhpl acapavaglr vsgsypladv
      181 gaildavsas lqlrrntvtr fwghqvvrie laar
//
LOCUS       WP_235211866             161 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Burkholderia mallei].
ACCESSION   WP_235211866
VERSION     WP_235211866.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia mallei
  ORGANISM  Burkholderia mallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017416.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05598.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Burkholderia mallei"
                     /db_xref="taxon:13373"
     Protein         1..161
                     /product="transposase"
                     /calculated_mol_wt=18708
     Region          1..161
                     /region_name="COG3666"
                     /note="Transposase, IS1182 family [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:442883"
ORIGIN      
        1 mlktpmptqh elemvtleel vpkdhllrqi daavdfefir akvahlycad ngrpaldpvv
       61 mfkllfigyl fgvrserqlm revqvnvayr wfarfrltdk vpdastfsqn rrrrftdttv
      121 yqeifdeivr qaikrglvdg rvlytdsthl kanankassm w
//
LOCUS       WP_235211870             254 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Burkholderia mallei].
ACCESSION   WP_235211870
VERSION     WP_235211870.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia mallei
  ORGANISM  Burkholderia mallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13751.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Burkholderia mallei"
                     /db_xref="taxon:13373"
     Protein         1..254
                     /product="transposase"
                     /calculated_mol_wt=28380
     Region          <1..213
                     /region_name="transpos_IS1182"
                     /note="IS1182 family transposase; NF033551"
                     /db_xref="CDD:468080"
ORIGIN      
        1 mdakhaiitd thvtpasvhd sqpyldrldr qrerfefkve avgldagyft pavcqgleer
       61 giagvmgyrt pnhkpgistn gsssttriat ntcarrgrpa vqhdqsarls giqiqcadlr
      121 alpgrsqctn saiavkvvtr hvwerakerv darrltewgq riyarrkqtv ersfadakql
      181 hghryarmrg lrkvaeqcll aaaaqnikki amllvrkrkk gpagpdwrfv rmllrlvsgl
      241 rcsfdyplaa npqs
//
LOCUS       WP_235211874             323 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Burkholderia mallei].
ACCESSION   WP_235211874
VERSION     WP_235211874.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia mallei
  ORGANISM  Burkholderia mallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13751.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Burkholderia mallei"
                     /db_xref="taxon:13373"
     Protein         1..323
                     /product="transposase"
                     /calculated_mol_wt=36283
     Region          <41..282
                     /region_name="transpos_IS1182"
                     /note="IS1182 family transposase; NF033551"
                     /db_xref="CDD:468080"
ORIGIN      
        1 meqtpaayte alngqwmrtg prmagsrwia ttmsrrlart pklsrtdpds gymvrddkpk
       61 gffyldhrtv dakhaiitdt hvtpasvhds qpyldrldrq rerfefkvea vgldagyftp
      121 avcqgleerg iagvmgyrtp nhkpgistng sssttriatn tcarrgrpav qhdqsarlsg
      181 iqiqcadlra lpgrsqctns aiavkvvtrh vwerakervd arrltewgqr iyarrkqtve
      241 rsfadakqlh ghryarmrgl rkvaeqclla aaaqnikkia mllarkrkkg pagpdwrfvr
      301 mllrlvsglr csfdyplaan pqs
//
LOCUS       WP_235211876             161 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Burkholderia mallei].
ACCESSION   WP_235211876
VERSION     WP_235211876.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia mallei
  ORGANISM  Burkholderia mallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017416.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05598.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Burkholderia mallei"
                     /db_xref="taxon:13373"
     Protein         1..161
                     /product="transposase"
                     /calculated_mol_wt=18722
     Region          1..161
                     /region_name="COG3666"
                     /note="Transposase, IS1182 family [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:442883"
ORIGIN      
        1 mlktpmptqh elemvtleel vpkdhllrqi daavdfefir akvahlycad ngrpaldpvv
       61 mfkllfigyl fgvrserqlm revqvnvayr wfarfrltdk vpdastfsqn rrrrftdttv
      121 yqeifdeivr qaikrglvdg rvlytdsthl kanakkassm w
//
LOCUS       WP_235211924             340 aa            linear   BCT 02-MAR-2025
DEFINITION  SLOG family protein [Sphingopyxis sp. LC81].
ACCESSION   WP_235211924
VERSION     WP_235211924.1
KEYWORDS    RefSeq.
SOURCE      Sphingopyxis sp. LC81
  ORGANISM  Sphingopyxis sp. LC81
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingopyxidaceae; Sphingopyxis.
REFERENCE   1  (residues 1 to 340)
  AUTHORS   Burroughs,A.M., Zhang,D., Schaffer,D.E., Iyer,L.M. and Aravind,L.
  TITLE     Comparative genomic analyses reveal a vast, novel network of
            nucleotide-centric systems in biological conflicts, immunity and
            signaling
  JOURNAL   Nucleic Acids Res 43 (22), 10633-10654 (2015)
   PUBMED   26590262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022151.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10686.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Sphingopyxis sp. LC81"
                     /db_xref="taxon:1502850"
     Protein         1..340
                     /product="SLOG family protein"
                     /calculated_mol_wt=36732
     Region          216..282
                     /region_name="YAcAr"
                     /note="YspA, cpYpsA-related SLOG family; pfam10686"
                     /db_xref="CDD:431435"
ORIGIN      
        1 msasmltpfs eaatrnfpms rfdnfadlae hyasltsada fagtfaseia asqlsihdep
       61 ttsdlpdada arivaahvtg evfalfsdtr lapvapriaw givnsfhkva qqlsrqedda
      121 arelgelari adpseihavk veetqrlcqs lheavaaiea mrdhaaeiyr vecgqpwsat
      181 tgsrtsrtlt asqidardyl aarsaekrea haptgpvvvl sggqdwtehe viwdrldtik
      241 aripamtlvt taqhkgadai gaawaaargv plvafrlnrq lgnraafern rsiqrllpve
      301 avicegsgiq inlaqnlraa gvpltifkhe hfairdqana
//
LOCUS       WP_235211955              71 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxylesterase family protein [Sphingopyxis sp. LC81].
ACCESSION   WP_235211955
VERSION     WP_235211955.1
KEYWORDS    RefSeq.
SOURCE      Sphingopyxis sp. LC81
  ORGANISM  Sphingopyxis sp. LC81
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingopyxidaceae; Sphingopyxis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012363.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00135.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Sphingopyxis sp. LC81"
                     /db_xref="taxon:1502850"
     Protein         1..71
                     /product="carboxylesterase family protein"
                     /calculated_mol_wt=7486
     Region          2..>58
                     /region_name="PnbA"
                     /note="Carboxylesterase type B [Lipid transport and
                     metabolism]; COG2272"
                     /db_xref="CDD:441873"
ORIGIN      
        1 mgelrwrapq pvipwagvrg atafghdcmq lpfpsdaapf gtppsedclt vnvwataafs
       61 twrsrlaatg s
//
LOCUS       WP_235211973             308 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2268 domain-containing putative Zn-dependent protease
            [Sphingopyxis sp. LC81].
ACCESSION   WP_235211973
VERSION     WP_235211973.1
KEYWORDS    RefSeq.
SOURCE      Sphingopyxis sp. LC81
  ORGANISM  Sphingopyxis sp. LC81
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingopyxidaceae; Sphingopyxis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021537.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10026.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Sphingopyxis sp. LC81"
                     /db_xref="taxon:1502850"
     Protein         1..308
                     /product="DUF2268 domain-containing putative Zn-dependent
                     protease"
                     /note="predicted Zn-dependent protease with a strongly
                     conserved HExxH motif; predicted Zn-dependent protease
                     with a strongly conserved HExxH motif; predicted
                     Zn-dependent protease with a strongly conserved HExxH
                     motif; predicted Zn-dependent protease with a strongly
                     conserved HExxH motif; predicted Zn-dependent protease
                     with a strongly conserved HExxH motif"
                     /calculated_mol_wt=33438
     Region          <105..302
                     /region_name="DUF2268"
                     /note="Predicted Zn-dependent protease (DUF2268); cl22923"
                     /db_xref="CDD:473995"
ORIGIN      
        1 mmqslfgval laaipgqase sapphggarv aivtsdidrf yalyddpala sqpdvvatry
       61 laaptpglae fmvmrritpe klavalrdkr qvfddargca tklpdvrtrl vaatdrlarl
      121 ypaakfppit iaigrattag tanakglyig lealcaakfi eaddedrfvh viaheyvhaq
      181 qpiaqiedre esvlraalve gaaefvaeqm sgsvgypllh qwakgrekel etaflaekdg
      241 kamgsrwlyn qrgtdgwpgd lgywvgyrva ksyydrtpdk aaaikaiiem rdpaaflaes
      301 gwtpgmkl
//
LOCUS       WP_235212089             428 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Sphingopyxis sp. LC81].
ACCESSION   WP_235212089
VERSION     WP_235212089.1
KEYWORDS    RefSeq.
SOURCE      Sphingopyxis sp. LC81
  ORGANISM  Sphingopyxis sp. LC81
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingopyxidaceae; Sphingopyxis.
REFERENCE   1  (residues 1 to 428)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Sphingopyxis sp. LC81"
                     /db_xref="taxon:1502850"
     Protein         1..428
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=45082
     Region          14..>70
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
     Region          14..61
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
     Region          168..426
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(218..219,221..222,225,228..229,232,235..236,
                     239..240,243,246..247,249..250,253,256,259..260,263..264,
                     267,270,273..274,277,281,284,291,295,298,301..302,305,
                     308..309,312..313,315..316,319..320,333..334,337,340..341,
                     344,347..348,350..351,354..355,358,361..362,365,368..369,
                     371..372,375..376,378..379,382,385..386,389,392..393)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            273..306
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 mnamgyaftp spghasaiga dahmsqvidl frgnpqlral avvdgderpv giireqrvre
       61 llfcpfwfsl mqnptiggsi asmiepcpta dvarsttdll rivaqspgqq elilvragrf
      121 vetldsgqla klamlrevel aqeraartth iddagrrfqq ditaltatls emarkveava
      181 gtlseraqqt grdavtvaga taqtlaglqd lgdrghalaa tmakivddgs rartvrgdah
      241 rkikqasdrs valkaasqsi eqmlaliidm asrtnmlaln agieaaragd agrgfavvas
      301 evktlasqtr saagditqyv drirdiveqv aagfeeveka idanngfsda idravdgqsa
      361 ttltiasyve qavfagreid arvreighga tavgdgaqal gklsagltea alslhqrard
      421 fveavaaa
//
LOCUS       WP_235212229             169 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: antitoxin Xre/MbcA/ParS toxin-binding
            domain-containing protein [Aeromonas].
ACCESSION   WP_235212229
VERSION     WP_235212229.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas
  ORGANISM  Aeromonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae.
REFERENCE   1  (residues 1 to 169)
  AUTHORS   Zhang,S.P., Feng,H.Z., Wang,Q., Kempher,M.L., Quan,S.W., Tao,X.,
            Niu,S., Wang,Y., Feng,H.Y. and He,Y.X.
  TITLE     Bacterial type II toxin-antitoxin systems acting through
            post-translational modifications
  JOURNAL   Comput Struct Biotechnol J 19, 86-93 (2020)
   PUBMED   33384857
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 169)
  AUTHORS   Freire,D.M., Gutierrez,C., Garza-Garcia,A., Grabowska,A.D.,
            Sala,A.J., Ariyachaokun,K., Panikova,T., Beckham,K.S.H., Colom,A.,
            Pogenberg,V., Cianci,M., Tuukkanen,A., Boudehen,Y.M., Peixoto,A.,
            Botella,L., Svergun,D.I., Schnappinger,D., Schneider,T.R.,
            Genevaux,P., de Carvalho,L.P.S., Wilmanns,M., Parret,A.H.A. and
            Neyrolles,O.
  TITLE     An NAD+ Phosphorylase Toxin Triggers Mycobacterium tuberculosis
            Cell Death
  JOURNAL   Mol Cell 73 (6), 1282-1291 (2019)
   PUBMED   30792174
REFERENCE   3  (residues 1 to 169)
  AUTHORS   Piscotta,F.J., Jeffrey,P.D. and Link,A.J.
  TITLE     ParST is a widespread toxin-antitoxin module that targets
            nucleotide metabolism
  JOURNAL   Proc Natl Acad Sci U S A 116 (3), 826-834 (2019)
   PUBMED   30598453
REFERENCE   4  (residues 1 to 169)
  AUTHORS   Skjerning,R.B., Senissar,M., Winther,K.S., Gerdes,K. and
            Brodersen,D.E.
  TITLE     The RES domain toxins of RES-Xre toxin-antitoxin modules induce
            cell stasis by degrading NAD+
  JOURNAL   Mol Microbiol 111 (1), 221-236 (2019)
   PUBMED   30315706
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021255.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09722.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Aeromonas"
                     /db_xref="taxon:642"
     Protein         1..169
                     /product="antitoxin Xre/MbcA/ParS toxin-binding
                     domain-containing protein"
                     /calculated_mol_wt=18315
     Region          44..169
                     /region_name="COG5642"
                     /note="Uncharacterized conserved protein, DUF2384 family
                     [Function unknown]"
                     /db_xref="CDD:444366"
ORIGIN      
        1 mknfiatfkt iscnenmnim tylayhpgqi kpysarlims lgipsdplsv hswivagisp
       61 eiiirlvesv rsdmktichl vgiskstitr klkngipltp eqgsrvysvi qaldaaislh
      121 nddlamamfw lhcpakglgg eipmnmlttt sgvqavvdli griehgvis
//
LOCUS       WP_235212297             608 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 9 protein [Sphingobacterium sp. ML3W].
ACCESSION   WP_235212297
VERSION     WP_235212297.1
KEYWORDS    RefSeq.
SOURCE      Sphingobacterium sp. ML3W
  ORGANISM  Sphingobacterium sp. ML3W
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012961.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00759.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Sphingobacterium sp. ML3W"
                     /db_xref="taxon:1538644"
     Protein         1..608
                     /product="glycoside hydrolase family 9 protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=68762
     Region          33..115
                     /region_name="CelD_N"
                     /note="Cellulase N-terminal ig-like domain; pfam02927"
                     /db_xref="CDD:427058"
     Region          128..593
                     /region_name="Glyco_hydro_9"
                     /note="Glycosyl hydrolase family 9; pfam00759"
                     /db_xref="CDD:459928"
ORIGIN      
        1 mklstqnllh lqrvfmlvfa cfvfnfakaq eqawirvnql gytpsgikva vfggkekgny
       61 iqfelidvkt qkrvfsntig kdfgsygpfv qsfrfdfsay rdtgsyylkv gdvkspvfki
      121 gkdvykgaad falrymrqqr tlfnpylqds chthdgfvlh ankvgiadst qidagggwhd
      181 asdylqystt sanatyhlla ayrdfpnvfg dqkqangldg engradvlde akwgldwlik
      241 mhpapnlmfn qiaddrdhtn mrmpgedpfy grgyerpvyf idgepqqrgk fmnnttgtss
      301 taakfssafh lgsslfwgdd kkyaktlakk aktaysfali kpgvtqtvsv kspyiyaedn
      361 wvddmelaga mfygatnnkk flkesmgyar qekitpwmtt dtaahyqwyp finlghyelg
      421 kqlkgndree ivsyyksgie qvfaraekna fyrgvpfiwc snnltvsfai qclwykelts
      481 dvqydelaqa nidwlfgtnp wgtsmvyglp swgdtpvnph safthlknfp idgglvdgpi
      541 mtstyrnlig ikllnedlya pfqsdlvvyh ddygdystne ptmdgtasli yllasqeqka
      601 ieepqvkk
//
LOCUS       WP_235212301             131 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxypeptidase-like regulatory domain-containing protein
            [Sphingobacterium sp. ML3W].
ACCESSION   WP_235212301
VERSION     WP_235212301.1
KEYWORDS    RefSeq.
SOURCE      Sphingobacterium sp. ML3W
  ORGANISM  Sphingobacterium sp. ML3W
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.
REFERENCE   1  (residues 1 to 131)
  AUTHORS   Cho,K.H. and Salyers,A.A.
  TITLE     Biochemical analysis of interactions between outer membrane
            proteins that contribute to starch utilization by Bacteroides
            thetaiotaomicron
  JOURNAL   J Bacteriol 183 (24), 7224-7230 (2001)
   PUBMED   11717282
REFERENCE   2  (residues 1 to 131)
  AUTHORS   Shipman,J.A., Berleman,J.E. and Salyers,A.A.
  TITLE     Characterization of four outer membrane proteins involved in
            binding starch to the cell surface of Bacteroides thetaiotaomicron
  JOURNAL   J Bacteriol 182 (19), 5365-5372 (2000)
   PUBMED   10986238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025092.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13715.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Sphingobacterium sp. ML3W"
                     /db_xref="taxon:1538644"
     Protein         1..131
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /calculated_mol_wt=14548
     Region          29..>122
                     /region_name="OMP_RagA_SusC"
                     /note="TonB-linked outer membrane protein, SusC/RagA
                     family; TIGR04056"
                     /db_xref="CDD:274948"
ORIGIN      
        1 mkfiqimcll ccciahtttf aqqvkellia gtivdknrep isnvsvyikd kpsvgtstsq
       61 agkfsirany gdkivfsyvg ynavehlave tndqlrislm dnsttmdevm vvglgnvqrk
      121 iswchiqteq w
//
LOCUS       WP_235212310             506 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5689 domain-containing protein [Sphingobacterium sp. ML3W].
ACCESSION   WP_235212310
VERSION     WP_235212310.1
KEYWORDS    RefSeq.
SOURCE      Sphingobacterium sp. ML3W
  ORGANISM  Sphingobacterium sp. ML3W
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040146.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18942.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Sphingobacterium sp. ML3W"
                     /db_xref="taxon:1538644"
     Protein         1..506
                     /product="DUF5689 domain-containing protein"
                     /calculated_mol_wt=54530
     Region          37..>170
                     /region_name="DUF5689"
                     /note="Family of unknown function (DUF5689); pfam18942"
                     /db_xref="CDD:465924"
ORIGIN      
        1 mkkkffniit mmvvlvamts cqdtnypggt isshigifdl ralfkgemvt idaeklagss
       61 klaalvvsdh kggnlpegll vvqdtrrlgk lrgisidlgd aamnyqpgds viidilgsql
      121 lredgilklk nikesqiakv asgrpitnnv vtskailenp dayestlvii lkggfnpipk
      181 ageilsgtkv lndgfgnlnl vtnekadfsq qspyilgnyy givfgqedgt gvstpylrcr
      241 skadvlmlss eievasiiit gfssdvkgsd tnyeylqlma tedidfsktp ysvvvsnnan
      301 astptgapan gwatggmrty kfnltkgvar kgtffyvggk yqlinggast slassnwvln
      361 ydynendgfd fgskrsglfa nsgnsfgiai fkgttvtkds kpvdvmnnsg ggalwegnkg
      421 yritnndfyd vinpltmepq pffkqgtnql flkyntadvg yfvslggeyn ltlgrwtaar
      481 sqnnvemtkt stiaeiepen atilve
//
LOCUS       WP_235212335             345 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF5007 domain-containing protein [Sphingobacterium].
ACCESSION   WP_235212335
VERSION     WP_235212335.1
KEYWORDS    RefSeq.
SOURCE      Sphingobacterium
  ORGANISM  Sphingobacterium
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027713.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16398.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Sphingobacterium"
                     /db_xref="taxon:28453"
     Protein         1..345
                     /product="DUF5007 domain-containing protein"
                     /calculated_mol_wt=39539
     Region          64..344
                     /region_name="DUF5007"
                     /note="Domain of unknown function (DUF5007); pfam16398"
                     /db_xref="CDD:406729"
ORIGIN      
        1 mklyrsirqv vlcglallal tscekyiptd qdslgedvvy sitdfqpvlg rntfynsivn
       61 vgqntsqpls fkivnvrdvd gqpatlfndk fpvkiwkgay tgfeksieei eskrkteyrp
      121 lleileksgn infwgesgss gfiktqpdsg yvfdielnnt ggrrylrnfr lkplrerpye
      181 psiidpitgl spvpytyvsq lsgnmrtdrt nsamfysdir vyfnkleses kgsktltisf
      241 ldslnntidp kkfsstdwek lvhgfkhrfe nnkvvydvay pipltamate ytdvtgnnaf
      301 mqfkfrrkgd fgivednyfg lefaifeegd weiqfrfpne spkfd
//
LOCUS       WP_235212339              60 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: CcmD family protein [Sphingobacterium].
ACCESSION   WP_235212339
VERSION     WP_235212339.1
KEYWORDS    RefSeq.
SOURCE      Sphingobacterium
  ORGANISM  Sphingobacterium
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040113.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20077.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..60
                     /organism="Sphingobacterium"
                     /db_xref="taxon:28453"
     Protein         1..60
                     /product="CcmD family protein"
                     /calculated_mol_wt=6709
     Region          1..54
                     /region_name="CcmD_alt"
                     /note="CcmD family protein; pfam20077"
                     /db_xref="CDD:466281"
ORIGIN      
        1 mmttlnifaq gdidmatglr ssgkiyvvvl vmlvlffgva aylfildrki trlekrqdqk
//
LOCUS       WP_235212341             891 aa            linear   BCT 02-MAR-2025
DEFINITION  multicopper oxidase domain-containing protein [Sphingobacterium sp.
            ML3W].
ACCESSION   WP_235212341
VERSION     WP_235212341.1
KEYWORDS    RefSeq.
SOURCE      Sphingobacterium sp. ML3W
  ORGANISM  Sphingobacterium sp. ML3W
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.
REFERENCE   1  (residues 1 to 891)
  AUTHORS   Page,C.C., Moser,C.C., Chen,X. and Dutton,P.L.
  TITLE     Natural engineering principles of electron tunnelling in biological
            oxidation-reduction
  JOURNAL   Nature 402 (6757), 47-52 (1999)
   PUBMED   10573417
REFERENCE   2  (residues 1 to 891)
  AUTHORS   Grossmann,J.G., Ingledew,W.J., Harvey,I., Strange,R.W. and
            Hasnain,S.S.
  TITLE     X-ray absorption studies and homology modeling define the
            structural features that specify the nature of the copper site in
            rusticyanin
  JOURNAL   Biochemistry 34 (26), 8406-8414 (1995)
   PUBMED   7599131
REFERENCE   3  (residues 1 to 891)
  AUTHORS   Messerschmidt,A., Ladenstein,R., Huber,R., Bolognesi,M.,
            Avigliano,L., Petruzzelli,R., Rossi,A. and Finazzi-Agro,A.
  TITLE     Refined crystal structure of ascorbate oxidase at 1.9 A resolution
  JOURNAL   J Mol Biol 224 (1), 179-205 (1992)
   PUBMED   1548698
REFERENCE   4  (residues 1 to 891)
  AUTHORS   Messerschmidt,A. and Huber,R.
  TITLE     The blue oxidases, ascorbate oxidase, laccase and ceruloplasmin.
            Modelling and structural relationships
  JOURNAL   Eur J Biochem 187 (2), 341-352 (1990)
   PUBMED   2404764
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019352.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07732.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..891
                     /organism="Sphingobacterium sp. ML3W"
                     /db_xref="taxon:1538644"
     Protein         1..891
                     /product="multicopper oxidase domain-containing protein"
                     /GO_function="GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=100667
     Region          35..61
                     /region_name="HMBD"
                     /note="Heavy metal binding domain; pfam19335"
                     /db_xref="CDD:437167"
     Region          125..681
                     /region_name="copper_res_A"
                     /note="copper-resistance protein, CopA family; TIGR01480"
                     /db_xref="CDD:273649"
ORIGIN      
        1 mllkyitlvv glfvafphtf aqhhhqevsq sealyvcpmh pdvtsnkpga cpkcgmalvk
       61 kegkkqdtvh hqsqgenpyl gnnskytifq nfaipvakpt tdpsgipaft lsnlekdiet
      121 ktiagaragl hlpagtegvk tvrydlfvsd sivnftgknr kaiavngslp applvftvgd
      181 taliyvhnks deptsihwhg iflpnrmdgv ahltqhpipp hatyvykfpv lqdgtfwyhs
      241 hyslqeqigl ygalifnkrt epdiptipvv lsdwsdmnph einrslhags dwfaikkkat
      301 qsyseaikag rlkvkltnew krmtamdvsd vyyekfling apaqhlsqfk agdevrlriv
      361 nggastyfwl sfsggklkvi andandvtpv evdrmliaps etydvvvtip enmkyeflat
      421 aedrtnhasl wlgsgmempa dklpklayfe gmkmmndmmk mngdmkpmgh emslqqvdmn
      481 avmypelkkd veddssgsha kkvyvcpmhp dvvadqpgsc pkcgmqlelk kqshqtessh
      541 hhatkgagdl vtlnynmles vekttlpagt wkeldfeltg nmnryvwtin nktvsesdki
      601 likrgenmri klynnsmmrh pmhlhghdfr linqygersp lknvvdimpm etltlefapt
      661 edgdwffhch ilyhmmsgmg rifnmensea npeipnpeea yrmikmddrm ftlsgegslq
      721 sngteglvty antrwqvsqm wnvgykathg yesettvgrf igkmqylmpy vgfdyhykki
      781 tdheknlfgn ternmfgqka nrsnrrvpvf giaytlpwlv tadmrvdtng klrfqlgred
      841 ipltprlrmn wmvntdkeyt igsryimtky islgahydsd mgagaglvft y
//
LOCUS       WP_235212346             881 aa            linear   BCT 02-MAR-2025
DEFINITION  putative LPS assembly protein LptD [Sphingobacterium sp. ML3W].
ACCESSION   WP_235212346
VERSION     WP_235212346.1
KEYWORDS    RefSeq.
SOURCE      Sphingobacterium sp. ML3W
  ORGANISM  Sphingobacterium sp. ML3W
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040057.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19838.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Sphingobacterium sp. ML3W"
                     /db_xref="taxon:1538644"
     Protein         1..881
                     /product="putative LPS assembly protein LptD"
                     /calculated_mol_wt=99009
     Region          7..123
                     /region_name="LptA"
                     /note="Lipopolysaccharide export system protein LptA [Cell
                     wall/membrane/envelope biogenesis]; COG1934"
                     /db_xref="CDD:441537"
     Region          219..694
                     /region_name="LptD_2"
                     /note="LptD protein; pfam19838"
                     /db_xref="CDD:466203"
ORIGIN      
        1 mkslthilti flilslsvha afsqgktpvk ttstslkdsv svkgnpdsvk mtrdstlink
       61 dstknngglq aevsiiards qrtevdknis hlykgakvky qdfelsadyi rldrnkkqif
      121 asgiidhngk ytgrpivmmg gespktvdsl lydyekqegn tygimtdveg gfiqakvvrk
      181 nlydemslyh glystcnlpe phthfgifls kgivtknqii agpsylvlqn iplkfigfpf
      241 affpkpdkrs sgflfpsfge dytrgfaird agwylafndy wdseirgsiy skgsweasvn
      301 trymvnykyn ggfniryaat ktgvegtdny gtnkdfnvtw nhtqrqeanp gtsfsanvnf
      361 gtgsyfrntg angtnnfndl tknrmassia ygrvfadgkv nftstishnq dmslgsvqlq
      421 lpnfslnvss fnpfdskdrv deqkwyqrin vgyslqgtnt lntgdstlfs kqtlkeftng
      481 fqhnipisls lnafkhfqfn tsvnyterwy lqstrqrmen tkegyipvid tvqgfkrayd
      541 ysvstglstk iygsypkmgk iqairhvitp svnlnyrpdf sdamygfykn yidqygmlnr
      601 ysifqnnvyg tpsagksmgi gfsidnniea kiksksdttd ggikkipllq glslsgnynf
      661 vadsmklspl nfsgrtalfk ekvninfngt ldpyaidqmg qrydkyvfnd gklarltnfg
      721 lsfdysfnpk aaqnrnnnid slrnqmggnm tpeqaqalsr isadpnafvn fsipwnlags
      781 fsfqyskpgh tssitstvni hgdfsltpkw kvtfnsgydl kakeitltqf niyrdlhcwd
      841 iamgwtpfgr yqsynvtira kssilqdlkl skrnssggsy y
//
LOCUS       WP_235212381             143 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5675 family protein [Sphingobacterium sp. ML3W].
ACCESSION   WP_235212381
VERSION     WP_235212381.1
KEYWORDS    RefSeq.
SOURCE      Sphingobacterium sp. ML3W
  ORGANISM  Sphingobacterium sp. ML3W
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040141.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18925.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Sphingobacterium sp. ML3W"
                     /db_xref="taxon:1538644"
     Protein         1..143
                     /product="DUF5675 family protein"
                     /calculated_mol_wt=16353
     Region          2..128
                     /region_name="DUF5675"
                     /note="Family of unknown function (DUF5675); pfam18925"
                     /db_xref="CDD:465915"
ORIGIN      
        1 mrveqgnnst lseiylnnqf icygledipr ekkipgstci pigtyrlgfn rdggmngnyy
       61 drfpklhrgm ieiqgvpnfs hvyihignth rqtagcllvg tryvfehgdy rieqsvtayk
      121 rlyalltelm vvrevfvqvm vte
//
LOCUS       WP_235212354             219 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: sterol desaturase family protein [Sphingobacterium].
ACCESSION   WP_235212354
VERSION     WP_235212354.1
KEYWORDS    RefSeq.
SOURCE      Sphingobacterium
  ORGANISM  Sphingobacterium
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae.
REFERENCE   1  (residues 1 to 219)
  AUTHORS   Zhu,G., Koszelak-Rosenblum,M., Connelly,S.M., Dumont,M.E. and
            Malkowski,M.G.
  TITLE     The Crystal Structure of an Integral Membrane Fatty Acid
            alpha-Hydroxylase
  JOURNAL   J Biol Chem 290 (50), 29820-29833 (2015)
   PUBMED   26515067
REFERENCE   2  (residues 1 to 219)
  AUTHORS   Lagarde,D. and Vermaas,W.
  TITLE     The zeaxanthin biosynthesis enzyme beta-carotene hydroxylase is
            involved in myxoxanthophyll synthesis in Synechocystis sp. PCC 6803
  JOURNAL   FEBS Lett 454 (3), 247-251 (1999)
   PUBMED   10431816
REFERENCE   3  (residues 1 to 219)
  AUTHORS   Husselstein,T., Schaller,H., Gachotte,D. and Benveniste,P.
  TITLE     Delta7-sterol-C5-desaturase: molecular characterization and
            functional expression of wild-type and mutant alleles
  JOURNAL   Plant Mol Biol 39 (5), 891-906 (1999)
   PUBMED   10344195
REFERENCE   4  (residues 1 to 219)
  AUTHORS   Mitchell,A.G. and Martin,C.E.
  TITLE     Fah1p, a Saccharomyces cerevisiae cytochrome b5 fusion protein, and
            its Arabidopsis thaliana homolog that lacks the cytochrome b5
            domain both function in the alpha-hydroxylation of
            sphingolipid-associated very long chain fatty acids
  JOURNAL   J Biol Chem 272 (45), 28281-28288 (1997)
   PUBMED   9353282
REFERENCE   5  (residues 1 to 219)
  AUTHORS   Bard,M., Bruner,D.A., Pierson,C.A., Lees,N.D., Biermann,B.,
            Frye,L., Koegel,C. and Barbuch,R.
  TITLE     Cloning and characterization of ERG25, the Saccharomyces cerevisiae
            gene encoding C-4 sterol methyl oxidase
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 186-190 (1996)
   PUBMED   8552601
REFERENCE   6  (residues 1 to 219)
  AUTHORS   Aarts,M.G., Keijzer,C.J., Stiekema,W.J. and Pereira,A.
  TITLE     Molecular characterization of the CER1 gene of arabidopsis involved
            in epicuticular wax biosynthesis and pollen fertility
  JOURNAL   Plant Cell 7 (12), 2115-2127 (1995)
   PUBMED   8718622
REFERENCE   7  (residues 1 to 219)
  AUTHORS   Arthington,B.A., Bennett,L.G., Skatrud,P.L., Guynn,C.J.,
            Barbuch,R.J., Ulbright,C.E. and Bard,M.
  TITLE     Cloning, disruption and sequence of the gene encoding yeast C-5
            sterol desaturase
  JOURNAL   Gene 102 (1), 39-44 (1991)
   PUBMED   1864507
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016041.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04116.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Sphingobacterium"
                     /db_xref="taxon:28453"
     Protein         1..219
                     /product="sterol desaturase family protein"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_process="GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=25669
     Region          10..200
                     /region_name="FA_hydroxylase"
                     /note="Fatty acid hydroxylase; cl01132"
                     /db_xref="CDD:412761"
ORIGIN      
        1 makrnfvsns tdssrmfknd flesltkvhw svplifylpv igyftwkaig pgdlsilsym
       61 qyfvfglafw tlfeyalhrw ifhyhptsqw gkriafifhg vhhdypkdrl rlvmplsasi
      121 plaalvyylf tfffssdiil aaffsgfmig yliydechya mhhanfksgi fkrikqhhml
      181 hhysdpehgf gvssalwdev mrsgfpkeke hsdkvqtdk
//
LOCUS       WP_235212391             123 aa            linear   BCT 02-MAR-2025
DEFINITION  C10 family peptidase [Sphingobacterium sp. ML3W].
ACCESSION   WP_235212391
VERSION     WP_235212391.1
KEYWORDS    RefSeq.
SOURCE      Sphingobacterium sp. ML3W
  ORGANISM  Sphingobacterium sp. ML3W
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013779.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01640.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Sphingobacterium sp. ML3W"
                     /db_xref="taxon:1538644"
     Protein         1..123
                     /product="C10 family peptidase"
                     /GO_function="GO:0008234 - cysteine-type peptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=13041
     Region          <10..94
                     /region_name="Peptidase_C10"
                     /note="Peptidase C10 family; pfam01640"
                     /db_xref="CDD:460277"
ORIGIN      
        1 msstfkslgy stsatsgdfn sstvlseits nrpailsgys tksgsifpty ggghvwivdg
       61 ahqlitcset lpdgstvggg gylwlhmnwg wggshngwfg yanadsgngn yqykrqmvys
      121 ihk
//
LOCUS       WP_235212398             211 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Sphingobacterium sp. ML3W].
ACCESSION   WP_235212398
VERSION     WP_235212398.1
KEYWORDS    RefSeq.
SOURCE      Sphingobacterium sp. ML3W
  ORGANISM  Sphingobacterium sp. ML3W
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024700.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13304.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Sphingobacterium sp. ML3W"
                     /db_xref="taxon:1538644"
     Protein         1..211
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=24437
     Region          <1..81
                     /region_name="COG3950"
                     /note="Predicted ATP-binding protein involved in virulence
                     [General function prediction only]"
                     /db_xref="CDD:443150"
ORIGIN      
        1 mfflavdima tltsenvrfd laegmvlide igthlhprwr mevvsrlrka fpkirfivts
       61 heplclrgli egetivltkn ehkeiialte lpdpselrid qiltsdffgl kstidpqtek
      121 lfdeyykila leekdrseeq knrilelshv iprikhlgdt ereelayyvi dellarktrk
      181 dglkiknnle tealiriksi wksldnksgl l
//
LOCUS       WP_235212474              91 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF2964 family protein [Burkholderia].
ACCESSION   WP_235212474
VERSION     WP_235212474.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022625.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11177.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         1..91
                     /product="DUF2964 family protein"
                     /calculated_mol_wt=9831
     Region          29..89
                     /region_name="DUF2964"
                     /note="Protein of unknown function (DUF2964); pfam11177"
                     /db_xref="CDD:431706"
ORIGIN      
        1 mmemeharav friatcmrrd mhpfgrrimv rtelrvvlaa iatfimlggi avaihgllfd
       61 ltdavrygaa aiavgvttaa ialnvwptdp h
//
LOCUS       WP_235211071             194 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleotidyltransferase domain-containing protein [Nocardia
            brasiliensis].
ACCESSION   WP_235211071
VERSION     WP_235211071.1
KEYWORDS    RefSeq.
SOURCE      Nocardia brasiliensis
  ORGANISM  Nocardia brasiliensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 194)
  AUTHORS   Bacot-Davis,V.R., Bassenden,A.V., Sprules,T. and Berghuis,A.M.
  TITLE     Effect of solvent and protein dynamics in ligand recognition and
            inhibition of aminoglycoside adenyltransferase 2''-Ia
  JOURNAL   Protein Sci 26 (9), 1852-1863 (2017)
   PUBMED   28734024
REFERENCE   2  (residues 1 to 194)
  AUTHORS   Cox,G., Stogios,P.J., Savchenko,A. and Wright,G.D.
  TITLE     Structural and molecular basis for resistance to aminoglycoside
            antibiotics by the adenylyltransferase ANT(2'')-Ia
  JOURNAL   mBio 6 (1), e02180-14 (2015)
   PUBMED   25564464
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 194)
  AUTHORS   Chen,Y.G., Qu,T.T., Yu,Y.S., Zhou,J.Y. and Li,L.J.
  TITLE     Insertion sequence ISEcp1-like element connected with a novel
            aph(2'') allele [aph(2'')-Ie] conferring high-level gentamicin
            resistance and a novel streptomycin adenylyltransferase gene in
            Enterococcus
  JOURNAL   J Med Microbiol 55 (Pt 11), 1521-1525 (2006)
   PUBMED   17030911
REFERENCE   4  (residues 1 to 194)
  AUTHORS   Cameron,F.H., Groot Obbink,D.J., Ackerman,V.P. and Hall,R.M.
  TITLE     Nucleotide sequence of the AAD(2'') aminoglycoside
            adenylyltransferase determinant aadB. Evolutionary relationship of
            this region with those surrounding aadA in R538-1 and dhfrII in
            R388
  JOURNAL   Nucleic Acids Res 14 (21), 8625-8635 (1986)
   PUBMED   3024112
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022167.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10706.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Nocardia brasiliensis"
                     /db_xref="taxon:37326"
     Protein         1..194
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /calculated_mol_wt=21434
ORIGIN      
        1 meeadrlwaa wtpgevaarl sgvaapwyva agwaldlftg gasrphgdie igvpaagfge
       61 iaaalpgydw evvgdgrawp ypaaaehhfq twlrepgsgr yrldvfreaq agdrwvcrrd
      121 psitvsyael ilrtddgipy sipevallfk akglrakdea dfervlpamd qarrarlfew
      181 lsrvhpghaw larl
//
LOCUS       WP_235212554              64 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-protein phosphatase [Burkholderia pyrrocinia].
ACCESSION   WP_235212554
VERSION     WP_235212554.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pyrrocinia
  ORGANISM  Burkholderia pyrrocinia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13350.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..64
                     /organism="Burkholderia pyrrocinia"
                     /db_xref="taxon:60550"
     Protein         1..64
                     /product="tyrosine-protein phosphatase"
                     /GO_function="GO:0004721 - phosphoprotein phosphatase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=7041
     Region          <3..64
                     /region_name="Y_phosphatase3"
                     /note="Tyrosine phosphatase family; pfam13350"
                     /db_xref="CDD:463853"
ORIGIN      
        1 mprlsprlkk pagmmtalqr ahadylraaf dqvtasygsi tsyivhglql dqatlnairr
       61 rmlv
//
LOCUS       WP_235212614              69 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: XRE family transcriptional regulator [Burkholderia].
ACCESSION   WP_235212614
VERSION     WP_235212614.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025120.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13744.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         1..69
                     /product="XRE family transcriptional regulator"
                     /calculated_mol_wt=7274
     Region          <4..61
                     /region_name="COG5606"
                     /note="Predicted DNA-binding protein, XRE-type HTH domain
                     [General function prediction only]"
                     /db_xref="CDD:444337"
ORIGIN      
        1 mtssrglned eaaalaemar pvvtpeqrer lrnvslellm qtlaslgrhv eivvrpagpp
       61 rsagiavsv
//
LOCUS       WP_235212600             186 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4865 family protein [Burkholderia paludis].
ACCESSION   WP_235212600
VERSION     WP_235212600.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia paludis
  ORGANISM  Burkholderia paludis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027483.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16157.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Burkholderia paludis"
                     /db_xref="taxon:1506587"
     Protein         1..186
                     /product="DUF4865 family protein"
                     /calculated_mol_wt=20403
     Region          3..173
                     /region_name="DUF4865"
                     /note="Domain of unknown function (DUF4865); pfam16157"
                     /db_xref="CDD:465034"
ORIGIN      
        1 mhrlpadydl dlirerarer grhwddapdl lfkgfllrea grhgatensf aslylwrneq
       61 aftrfvaegr yrvvtasfgr apidvqvvld arkgsastar farldaidip vdsdldatla
      121 reiarnreaa aqagvvaaav sidtarwrls rillsehepe ggaagtvhqv lylarplldt
      181 leagga
//
LOCUS       WP_235212585             453 aa            linear   BCT 02-MAR-2025
DEFINITION  right-handed parallel beta-helix repeat-containing protein
            [Burkholderia pyrrocinia].
ACCESSION   WP_235212585
VERSION     WP_235212585.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pyrrocinia
  ORGANISM  Burkholderia pyrrocinia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024627.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13229.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Burkholderia pyrrocinia"
                     /db_xref="taxon:60550"
     Protein         1..453
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /calculated_mol_wt=44422
     Region          20..>109
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          78..390
                     /region_name="NosD"
                     /note="Nitrous oxide reductase accessory protein NosD,
                     contains tandem CASH domains [Inorganic ion transport and
                     metabolism]; COG3420"
                     /db_xref="CDD:442646"
ORIGIN      
        1 mrtvdrvmla alclgvtacg gdnaapatqt vastptsaae pasaasgttp sstnptspap
       61 taspagatls ptpganpvlv advtvfpaad gsdqadalqk afdslkagqr lviapgryvv
      121 ghslavtvpr vvisgygatl aatnpadqti vmsgagstlv gvtlagtgtt rlttpastkv
      181 evtgagvqvl rvtidggasg gifvfggsgv aivgntvrat ladgihttyg stnvlvqnnt
      241 vtgtgddlia vvsyvgdgrv nsnvlidhna vsgnawgrgi svvggqavti snntvdgvqk
      301 aagilvaqed swktygvsnv vitgnvvani qnsnvnnglq ptqqaaield twtgtvtdva
      361 vtgnrvsgag yagfraygnv csfsvtgntf ssiagspvsl lssgcaasqi vvdanrlgdg
      421 svlarpsgas atgaftvtga daslmpqvrt ggm
//
LOCUS       WP_235212662             133 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar basal body protein [Burkholderia paludis].
ACCESSION   WP_235212662
VERSION     WP_235212662.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia paludis
  ORGANISM  Burkholderia paludis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012674.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00460.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Burkholderia paludis"
                     /db_xref="taxon:1506587"
     Protein         1..133
                     /product="flagellar basal body protein"
                     /GO_process="GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /calculated_mol_wt=13954
     Region          18..121
                     /region_name="FlgB"
                     /note="flagellar basal-body rod protein FlgB; TIGR01396"
                     /db_xref="CDD:273598"
ORIGIN      
        1 mndqqenavt egmeaitsat lglaldaasl rqqaiaania naqtdgyvpl gvdferqltd
       61 arqtwassgs vdaeslrgva prlvrvvsqd gmqsgldmqv aalaqngvhf qtllkalskh
      121 yalleeavsd gkk
//
LOCUS       WP_235212690             145 aa            linear   BCT 02-MAR-2025
DEFINITION  SUKH-3 domain-containing protein [Burkholderia paludis].
ACCESSION   WP_235212690
VERSION     WP_235212690.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia paludis
  ORGANISM  Burkholderia paludis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (residues 1 to 145)
  AUTHORS   Zhang,D., Iyer,L.M. and Aravind,L.
  TITLE     A novel immunity system for bacterial nucleic acid degrading toxins
            and its recruitment in various eukaryotic and DNA viral systems
  JOURNAL   Nucleic Acids Res 39 (11), 4532-4552 (2011)
   PUBMED   21306995
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14433.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Burkholderia paludis"
                     /db_xref="taxon:1506587"
     Protein         1..145
                     /product="SUKH-3 domain-containing protein"
                     /calculated_mol_wt=15349
     Region          <12..107
                     /region_name="SUKH-3"
                     /note="SUKH-3 immunity protein; pfam14433"
                     /db_xref="CDD:405171"
ORIGIN      
        1 mssgdgehpg dailrefggl vvgaagngqt carmglafha larkdrqida weqalgttmi
       61 gfaeddlgya efyadaqgrv fstncvvdgv ylcgftfgea vertllghvs vplllddrat
      121 iacygedlti ddprvmtvgq llgrm
//
LOCUS       WP_235212726             295 aa            linear   BCT 02-MAR-2025
DEFINITION  TfoX/Sxy family protein [Burkholderia paludis].
ACCESSION   WP_235212726
VERSION     WP_235212726.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia paludis
  ORGANISM  Burkholderia paludis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (residues 1 to 295)
  AUTHORS   Zulty,J.J. and Barcak,G.J.
  TITLE     Identification of a DNA transformation gene required for com101A+
            expression and supertransformer phenotype in Haemophilus influenzae
  JOURNAL   Proc Natl Acad Sci U S A 92 (8), 3616-3620 (1995)
   PUBMED   7724607
REFERENCE   2  (residues 1 to 295)
  AUTHORS   Williams,P.M., Bannister,L.A. and Redfield,R.J.
  TITLE     The Haemophilus influenzae sxy-1 mutation is in a newly identified
            gene essential for competence
  JOURNAL   J Bacteriol 176 (22), 6789-6794 (1994)
   PUBMED   7961436
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016854.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04993.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Burkholderia paludis"
                     /db_xref="taxon:1506587"
     Protein         1..295
                     /product="TfoX/Sxy family protein"
                     /calculated_mol_wt=30642
     Region          <3..84
                     /region_name="TfoX"
                     /note="Transcriptional regulator of competence genes,
                     TfoX/Sxy family [Transcription]; COG3070"
                     /db_xref="CDD:442304"
     Region          <70..>292
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
ORIGIN      
        1 mrldgvmfgf msrgslylrv ddvnrpafva agmgsfsyvr ptrtvalegy yetpadvled
       61 agalfdwcrs ayraallagp pkrkarktap dvkpvtkraa kavskppskp alvpeaklat
      121 kavakplsep araldakpat kraakaapkp lsesarvpdv kpatkraakv vpkplsklal
      181 apevkpvtkr atkavakpls epegapdvks atkqaakavs kppskparap eakpmtkraa
      241 kaapkpsakm assakpvakq aakavpkpat ksaakaapqp pskpassppa krkqt
//
LOCUS       WP_235212729             273 aa            linear   BCT 02-MAR-2025
DEFINITION  AfsA-related hotdog domain-containing protein [Burkholderia
            paludis].
ACCESSION   WP_235212729
VERSION     WP_235212729.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia paludis
  ORGANISM  Burkholderia paludis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (residues 1 to 273)
  AUTHORS   Dillon,S.C. and Bateman,A.
  TITLE     The Hotdog fold: wrapping up a superfamily of thioesterases and
            dehydratases
  JOURNAL   BMC Bioinformatics 5, 109 (2004)
   PUBMED   15307895
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 273)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015700.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03756.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Burkholderia paludis"
                     /db_xref="taxon:1506587"
     Protein         1..273
                     /product="AfsA-related hotdog domain-containing protein"
                     /calculated_mol_wt=30887
     Region          108..241
                     /region_name="AfsA"
                     /note="A-factor biosynthesis hotdog domain; pfam03756"
                     /db_xref="CDD:461042"
ORIGIN      
        1 mldrradkqy eetmdkgpfh qrsndslfiv gdrwgsvgid egmlsvsefv sglragryha
       61 plptlrpgfg vddrelevlr releqhgldp valsgmrepd cveiahthkr nprnvllakl
      121 vcldgahyra alrldsnnel lldhvtgchi samvmteaar qmflavteqy flggeadghh
      181 rfvindwqas fenflfplda vidyrieevd hdkadrlrfr vevlvkqagt vaarvrisft
      241 vfdaayltry emkqaartir rlkaglahpd ste
//
LOCUS       WP_235212754             229 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Burkholderia paludis].
ACCESSION   WP_235212754
VERSION     WP_235212754.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia paludis
  ORGANISM  Burkholderia paludis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Burkholderia paludis"
                     /db_xref="taxon:1506587"
     Protein         1..229
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=24767
     Region          18..229
                     /region_name="PRK15369"
                     /note="two component system response regulator"
                     /db_xref="CDD:185267"
ORIGIN      
        1 msnddlssvl tsfhrlmkil ivddhpilra gvakllqqag enmvviqsss adeamrlldq
       61 hldldvvlld ltlkgidgre aiaefgkirp elpivvlsas eslrdvrdaf ahgalgyvpk
      121 tsglqtllaa ikmaldgery vpsvildhqv lqdssmvrgq psarmtvslt qrqievlryv
      181 adgvpnkvia dkmslsektv kahitsifra lnvinrtqaa aagrkagli
//
LOCUS       WP_235212795             768 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing
            protein [Burkholderia paludis].
ACCESSION   WP_235212795
VERSION     WP_235212795.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia paludis
  ORGANISM  Burkholderia paludis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (residues 1 to 768)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02737.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Burkholderia paludis"
                     /db_xref="taxon:1506587"
     Protein         1..768
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /GO_function="GO:0070403 - NAD+ binding [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=81322
     Region          52..767
                     /region_name="fadB"
                     /note="fatty acid oxidation complex subunit alpha FadB;
                     PRK11730"
                     /db_xref="CDD:183293"
ORIGIN      
        1 mafgsrsvtg grsverpslf vscdsslptm ssgmcfpklv risrsgrlee dllfqgenis
       61 vlslddglve lrfdrhdaai nkldartide frqataciaa msavrgvlvt sakdvfivga
      121 ditefsamfr qsagaiatav rtndahvttf enlpvpsvva ingyalgggl elallgafrv
      181 masnarvglp evslglipgl ggtarlsrva glaaaidwva tgqsfdghaa vaagvvdevv
      241 apdmlretal awlrraaage idwraaqrrk kvrlpisaqe avdvvdrars tlgalhdrnr
      301 paaaiaadtm araavcdlde aldqeadafg rvartqaaas lvqvflneqv lkkqarriar
      361 aarpvsrgav igagtmgggi acasalrgia trmkditqar ldggmdsark hieqqvqggr
      421 ldlrqadacy asitpqlddt gladvdfaie avveqrdvkr gvlaeleqrv padavlasnt
      481 sslridelas altrpeqlvg mhffnpvstt rlveiirgsr tgdaavataa gyavalgktp
      541 ivvrdctgfv vnrvltpyvn aflrlleega dfeavdsame afgwpmgpay wldaigmdvl
      601 drvvevvgag yrdrmppveg saigrlverq rygrksgegf yryeaagtgr psrhaspdah
      661 alvaalqsdg patfsdhaiv ermmlpmive aahvldervv asaaeldmal vlglgfpaha
      721 ggalkyadwl gldrvvamcd shadlgapyv ptesmramav agayyypa
//
LOCUS       WP_235212859             315 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Serratia sp.
            Ag1].
ACCESSION   WP_235212859
VERSION     WP_235212859.1
KEYWORDS    RefSeq.
SOURCE      Serratia sp. Ag1
  ORGANISM  Serratia sp. Ag1
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 315)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Serratia sp. Ag1"
                     /db_xref="taxon:1524467"
     Protein         1..315
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=35369
     Region          16..303
                     /region_name="PRK10341"
                     /note="transcriptional regulator TdcA"
                     /db_xref="CDD:182391"
ORIGIN      
        1 mfylsnapcs lfmrnlpkls qlqifesiiq hgsfrsaakt lnqaqpaltr ainelektlg
       61 tslmvrgpkg vvlteagqll epriqlilre leravneveq vsyssrgsva lgssslpfft
      121 mlpaaikrfq krfpqvniyl tegqipells dirhgkldfa igttgaeava gdfitepfft
      181 asfcvlarke hplaqstsle qleeakwylp genqgyhsql tpllfpkphh pytvvrgdti
      241 taglqmvfda dflivaskem lkvpylkdhl ctlplekplp datyhfiysq rlsltlvark
      301 lmdklqweck nyvwn
//
LOCUS       WP_235212902             171 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Cedecea neteri].
ACCESSION   WP_235212902
VERSION     WP_235212902.1
KEYWORDS    RefSeq.
SOURCE      Cedecea neteri
  ORGANISM  Cedecea neteri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cedecea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Cedecea neteri"
                     /db_xref="taxon:158822"
     Protein         1..171
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=19192
     Region          1..>160
                     /region_name="PRK15043"
                     /note="HTH-type transcriptional regulator MlrA"
                     /db_xref="CDD:185003"
ORIGIN      
        1 marfnidvla sqcgvtpani rswqryglik pqvdenghrf fnfthcsrva aivgwlekga
       61 alpdmlalln geetgapsgw levqeallaq ceamqptklr gliwrygrev ppaifideiv
      121 rplrlwldad vqqemamsra mldtalieya tfvlasgrkr patgclfwrf r
//
LOCUS       WP_235212907             305 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Cedecea neteri].
ACCESSION   WP_235212907
VERSION     WP_235212907.1
KEYWORDS    RefSeq.
SOURCE      Cedecea neteri
  ORGANISM  Cedecea neteri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cedecea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14559.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Cedecea neteri"
                     /db_xref="taxon:158822"
     Protein         1..305
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=34610
     Region          10..>291
                     /region_name="PRK09782"
                     /note="bacteriophage N4 receptor, outer membrane subunit;
                     Provisional"
                     /db_xref="CDD:236624"
ORIGIN      
        1 mklrlktlcl afsllivgya qavtegsred lglsdyryfk vyphitraqk alssnneqra
       61 ihsfqhahel apesirltlw lagayrhfrh ddkaiallsq qlrqtpgnvp irqaldaipr
      121 pakkitsrke lvalheecga spsvvcraev geyavrlgel dialmqlnde afrvsaegqm
      181 lindltqsai alqkwhmadr gfalhdrlvt lgeeqyqqwf aillhlerdr rildlqqqgv
      241 mntpgmqlay aqslaerkky palkaylash hpqftadsek hnwrylmvtw ggmkaaehys
      301 ggwqk
//
LOCUS       WP_235212875             456 aa            linear   BCT 02-MAR-2025
DEFINITION  PTS transporter subunit EIIC [Cedecea neteri].
ACCESSION   WP_235212875
VERSION     WP_235212875.1
KEYWORDS    RefSeq.
SOURCE      Cedecea neteri
  ORGANISM  Cedecea neteri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cedecea.
REFERENCE   1  (residues 1 to 456)
  AUTHORS   Reizer,J., Paulsen,I.T., Reizer,A., Titgemeyer,F. and Saier,M.H.
            Jr.
  TITLE     Novel phosphotransferase system genes revealed by bacterial genome
            analysis: the complete complement of pts genes in mycoplasma
            genitalium
  JOURNAL   Microb Comp Genomics 1 (3), 151-164 (1996)
   PUBMED   9689210
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02378.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Cedecea neteri"
                     /db_xref="taxon:158822"
     Protein         1..456
                     /product="PTS transporter subunit EIIC"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /calculated_mol_wt=48847
     Region          4..>442
                     /region_name="PTS-II-ABC-beta"
                     /note="PTS system, beta-glucoside-specific IIABC
                     component; TIGR01995"
                     /db_xref="CDD:273919"
ORIGIN      
        1 matfsqlarq iiqhvgeaen iehlthcatr lrftlkdksk inkdelyklq evvklvenpg
       61 qfqivigpkv ekvfqaimaq mgepsaeepa apqgsvinrl latlsamftp yigvlagvgv
      121 vkgivvllqt mnlvdthsyv ftvfnalssg vfvmlpmfia vtaaerfkan kfsalaltaa
      181 mifpltdasv pgafhvmgla lnvkiyggav ipavfavlfl shverwlkkv ipeiaalvfv
      241 pclsliisgf vvftvigpva dyvgvgiang yawlynlspv isgallagig qlfvvfgvhw
      301 giiplalini qvngydtima mfmsavmgqf gaafgaifia rnlkdkqiai saslsaffgi
      361 tepalygvnl kyrmlfvfgc igaalgggit gllgvktysf lpvlnvfelg lfsgpdskmi
      421 yeviaiavaf tvpavltiiy gktrrlepas laedrr
//
LOCUS       WP_235213059             741 aa            linear   BCT 02-MAR-2025
DEFINITION  cellulase family glycosylhydrolase [Alkalihalobacillus
            alcalophilus].
ACCESSION   WP_235213059
VERSION     WP_235213059.1
KEYWORDS    RefSeq.
SOURCE      Alkalihalobacillus alcalophilus
  ORGANISM  Alkalihalobacillus alcalophilus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Alkalihalobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012377.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00150.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Alkalihalobacillus alcalophilus"
                     /db_xref="taxon:1445"
     Protein         1..741
                     /product="cellulase family glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0000272 - polysaccharide catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=85118
     Region          38..345
                     /region_name="BglC"
                     /note="Aryl-phospho-beta-D-glucosidase BglC, GH1 family
                     [Carbohydrate transport and metabolism]; COG2730"
                     /db_xref="CDD:442036"
     Region          363..447
                     /region_name="CBM_X2"
                     /note="Carbohydrate binding domain X2; pfam03442"
                     /db_xref="CDD:427295"
     Region          451..554
                     /region_name="CBM46"
                     /note="Carbohydrate binding domain; pfam18448"
                     /db_xref="CDD:436509"
     Region          <576..>664
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
ORIGIN      
        1 miilasvlvv smflvetsfa fnedkqemdi qqyvqemqpg wnlgntfdav gkdetawgnp
       61 fvskelikei aaqgfksiri pltfdqrmae ghdytikedf lnrvtqavdw sleeglyvmi
      121 nvhhdswiwl esgmyeeyde sfarfqeiwq qlsahfkdyp lelmfesine prfwgteeek
      181 rgflydlnts fydivresgg hndirplvlp tldsspdhie elehlyetii elddpylist
      241 vhfygfwpfs vnvaghthfd neaknhimet fdrvadrfta ngipvvlgey gllgfdthtg
      301 vvqqgeklkf fefmihyaqe keithmlwdn gqhfgrttfe wadqelydmm raswetrsat
      361 aeanfiylqs gediedrsle lnlngnefvs lllegqplie gedyvlngqq livkanllee
      421 ltsadslgen avltatfnqg adwyfkvity dipvlenseg ntsdyvipaq fngdalqtme
      481 aiypdgsaag phnwttfkef gyafspdyek deisfpygrf fdelndgdvn ltfyfwsges
      541 lsyqltkkgd eivgvfvped eetptepeee nplpddleee ndsveedkke eqikelqqkv
      601 nelqeqisyl lsqiesldvt aeiseikskl keferfleee lnslefalal kriqeiesel
      661 nklktiieew qkekekeeel astinnedeg ssgggavdkk ggdilpntat nvfnylllgg
      721 llfllgaalt vylkrrqsfe m
//
LOCUS       WP_235213114             180 aa            linear   BCT 02-MAR-2025
DEFINITION  YqcI/YcgG family protein [Alkalihalobacillus alcalophilus].
ACCESSION   WP_235213114
VERSION     WP_235213114.1
KEYWORDS    RefSeq.
SOURCE      Alkalihalobacillus alcalophilus
  ORGANISM  Alkalihalobacillus alcalophilus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Alkalihalobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020466.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08892.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Alkalihalobacillus alcalophilus"
                     /db_xref="taxon:1445"
     Protein         1..180
                     /product="YqcI/YcgG family protein"
                     /calculated_mol_wt=21265
     Region          4..>180
                     /region_name="YqcI_YcgG"
                     /note="YqcI/YcgG family; cl01349"
                     /db_xref="CDD:470166"
ORIGIN      
        1 mkksylldqn sitkvplpsw fnvsytqfqq avlkkdvscf fgrkaeplge lrysflphad
       61 wshlpktlke fleltkqrpl vrrglfvfve peekeqplqy yrryfwdvlq ylntqddkaw
      121 pvhtprepeh hlwsfcfeee slfsfadapa nkqrktrdlg qsmvigfqpt iifeglegte
//
LOCUS       WP_235213203            1078 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin acylase family protein [Amycolatopsis sp. MJM2582].
ACCESSION   WP_235213203
VERSION     WP_235213203.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis sp. MJM2582
  ORGANISM  Amycolatopsis sp. MJM2582
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
REFERENCE   1  (residues 1 to 1078)
  AUTHORS   Verhaert,R.M., Riemens,A.M., van der Laan,J.M., van Duin,J. and
            Quax,W.J.
  TITLE     Molecular cloning and analysis of the gene encoding the
            thermostable penicillin G acylase from Alcaligenes faecalis
  JOURNAL   Appl Environ Microbiol 63 (9), 3412-3418 (1997)
   PUBMED   9292993
REFERENCE   2  (residues 1 to 1078)
  AUTHORS   Duggleby,H.J., Tolley,S.P., Hill,C.P., Dodson,E.J., Dodson,G. and
            Moody,P.C.
  TITLE     Penicillin acylase has a single-amino-acid catalytic centre
  JOURNAL   Nature 373 (6511), 264-268 (1995)
   PUBMED   7816145
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013927.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01804.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1078
                     /organism="Amycolatopsis sp. MJM2582"
                     /db_xref="taxon:1427749"
     Protein         1..1078
                     /product="penicillin acylase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /GO_process="GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=114616
     Region          126..933
                     /region_name="Penicil_amidase"
                     /note="Penicillin amidase; pfam01804"
                     /db_xref="CDD:460338"
     Region          956..1072
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
ORIGIN      
        1 mrrgirvltt lagltlvagt vpalqanaae apqnsvvaaa lddycggqcg dilppgtkgn
       61 atlaeilahk afgtrpahsa dqlgkyasla dgyktlttdk inqffndasf gvpsgqvest
      121 ikprsdvtit rdkgigvpri vgttrpgtmy gagyaaaqdr lwlmdimrrv grgqltsyag
      181 gaqgnreleq sffasapyte qelqkqidna aasgprgaqg kadaeayvqg vnkyisdahs
      241 gryfpgeyvl tghvdaitna gtiepfkltd lvvlaavvga qfgaggggev qnaiakmamq
      301 ekygleqgdk vwkslrsedd petvktlhng qtfdygkaps npqgaampdk gsvtgqqlvf
      361 dptgsagtat pakvdvpape dqkavrgifd dgvlpgnlls ekhgmsnalv vsgaktasgh
      421 pvavfgpqag yfapqllmlq elqgpgisar gasfagismy vllgrgkdys wsatsasqdi
      481 tdtyavelce qngsaptkns nfyrfrgqcl pfeiverkna wkptvadgta egsytlrsfr
      541 tkygpvtsra lvggkpvaya slrstfqhei dtiigfqkfn dpdaiksaqd fqaaaadvnq
      601 tynwfyadsr dvayfnsgsn pvrnpnvdpa mpvkadagfd wqgwnpdgnl anytpssqhp
      661 qsinqdyyis wnnaqangya asgadksavh rgdlidarvk kmvssgtkvt rvnltqamee
      721 aaladlraek vlpelfkvid kapvtgpaad avaklktwla agglrsetsp gskayanada
      781 irimdawwpl lvnaqfkpgm gdaaygamvg vlkinespsg wqnevpgkhv gqghagssyq
      841 sgwwgyvhkd irsvlgqnva gplavkycgg gdvdacrqvl ldsltqaaaq pantvypgdg
      901 dcaagdqwca dtiihralgg itqdkmstqn rptfqqvvef pakrgdnian latgrsvsas
      961 shetgwynsp psnaidvnls trwasdwsdn qsitvdlgsv qrvsrvvlqw esaygkaykv
     1021 qvssdganwr daasivdgng gtdnvafeav dgryvrmagv qrgtkygysl yefevyah
//
LOCUS       WP_235213255             153 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6130 family protein [Amycolatopsis sp. MJM2582].
ACCESSION   WP_235213255
VERSION     WP_235213255.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis sp. MJM2582
  ORGANISM  Amycolatopsis sp. MJM2582
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039665.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19625.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Amycolatopsis sp. MJM2582"
                     /db_xref="taxon:1427749"
     Protein         1..153
                     /product="DUF6130 family protein"
                     /calculated_mol_wt=15691
     Region          <51..153
                     /region_name="DUF6130"
                     /note="Family of unknown function (DUF6130); pfam19625"
                     /db_xref="CDD:437457"
ORIGIN      
        1 mpalgklala avlltaacga pppapappga aagwspapvv plpsqpppsl vvdaplpeql
       61 amglvvlryr aenlrivpvy gpaaldvspr ighvhvtvdd aawhwadgsg epliiqslpa
      121 gphkvwigla dpthkildek tvnfvvpvhs ghh
//
LOCUS       WP_235213277             297 aa            linear   BCT 02-MAR-2025
DEFINITION  TetR/AcrR family transcriptional regulator C-terminal
            domain-containing protein [Amycolatopsis sp. MJM2582].
ACCESSION   WP_235213277
VERSION     WP_235213277.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis sp. MJM2582
  ORGANISM  Amycolatopsis sp. MJM2582
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
REFERENCE   1  (residues 1 to 297)
  AUTHORS   Hinrichs,W., Kisker,C., Duvel,M., Muller,A., Tovar,K., Hillen,W.
            and Saenger,W.
  TITLE     Structure of the Tet repressor-tetracycline complex and regulation
            of antibiotic resistance
  JOURNAL   Science 264 (5157), 418-420 (1994)
   PUBMED   8153629
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014906.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02909.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Amycolatopsis sp. MJM2582"
                     /db_xref="taxon:1427749"
     Protein         1..297
                     /product="TetR/AcrR family transcriptional regulator
                     C-terminal domain-containing protein"
                     /GO_process="GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /calculated_mol_wt=32626
     Region          <53..85
                     /region_name="TetR_N"
                     /note="Bacterial regulatory proteins, tetR family;
                     pfam00440"
                     /db_xref="CDD:425684"
     Region          101..243
                     /region_name="TetR_C_33"
                     /note="Tetracyclin repressor-like, C-terminal domain;
                     cl38988"
                     /db_xref="CDD:476841"
ORIGIN      
        1 mksvkeqrva eddaqpdper aiellwgtse perpglslgr ivaaavevad aeglaslsmr
       61 kvaerfgttt mslyryvpgk aelvelmrda vygefpmgss eglgwragle rwarraremy
      121 drhpwlvhsa gsrrlpgpni magydhaldv asrsglapaq viavvnlvgg fvesaarqag
      181 eaadlqrrtg vtherwwser eslferldry palerlwkag gmdapldafe fglrrtldgi
      241 qaliqsqgse visdenggge cvvcgkplag ggrgrprdyc sracqqrayr rrqvqsv
//
LOCUS       WP_235213300             169 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: hemerythrin domain-containing protein
            [Amycolatopsis].
ACCESSION   WP_235213300
VERSION     WP_235213300.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis
  ORGANISM  Amycolatopsis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae.
REFERENCE   1  (residues 1 to 169)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
REFERENCE   2  (residues 1 to 169)
  AUTHORS   Throup,J.P., Zappacosta,F., Lunsford,R.D., Annan,R.S., Carr,S.A.,
            Lonsdale,J.T., Bryant,A.P., McDevitt,D., Rosenberg,M. and
            Burnham,M.K.
  TITLE     The srhSR gene pair from Staphylococcus aureus: genomic and
            proteomic approaches to the identification and characterization of
            gene function
  JOURNAL   Biochemistry 40 (34), 10392-10401 (2001)
   PUBMED   11513618
REFERENCE   3  (residues 1 to 169)
  AUTHORS   Martins,L.J., Hill,C.P. and Ellis,W.R. Jr.
  TITLE     Structures of wild-type chloromet and L103N hydroxomet Themiste
            zostericola myohemerythrins at 1.8 A resolution
  JOURNAL   Biochemistry 36 (23), 7044-7049 (1997)
   PUBMED   9188702
REFERENCE   4  (residues 1 to 169)
  AUTHORS   Stenkamp,R.E., Sieker,L.C., Jensen,L.H. and McQueen,J.E. Jr.
  TITLE     Structure of methemerythrin at 2.8-Angstrom resolution: computer
            graphics fit of an averaged electron density map
  JOURNAL   Biochemistry 17 (13), 2499-2504 (1978)
   PUBMED   678527
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013936.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01814.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Amycolatopsis"
                     /db_xref="taxon:1813"
     Protein         1..169
                     /product="hemerythrin domain-containing protein"
                     /calculated_mol_wt=18820
     Region          1..146
                     /region_name="COG5592"
                     /note="Hemerythrin domain-containing protein [General
                     function prediction only]"
                     /db_xref="CDD:444331"
ORIGIN      
        1 mdlilddhrl feqllrdlrd atadregara alsaaliahg eaeeqdvypa lrrkdaidkh
       61 eqehgeeeha egnqalldll eckgtdtqkf ddaveklaea lmhhigeeeq tilnpartev
      121 sekirqdlgt awaqrrnall dqdcgsiefv kkvvaraeks gllssdddk
//
LOCUS       WP_235213303             184 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6326 family protein [Amycolatopsis sp. MJM2582].
ACCESSION   WP_235213303
VERSION     WP_235213303.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis sp. MJM2582
  ORGANISM  Amycolatopsis sp. MJM2582
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039408.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19851.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Amycolatopsis sp. MJM2582"
                     /db_xref="taxon:1427749"
     Protein         1..184
                     /product="DUF6326 family protein"
                     /calculated_mol_wt=19855
     Region          22..139
                     /region_name="DUF6326"
                     /note="Family of unknown function (DUF6326); pfam19851"
                     /db_xref="CDD:437683"
ORIGIN      
        1 mrtrrpttta ldeqripvra klaaawtslv llyayvdila ffkpgvlkdi eagvvfefdi
       61 sqtlftvflt lmaiptlmvv lsmtlparan rttnlivasi qvpfaafnav geswryfygl
      121 gvalelivla lilryawtwp trepkpssrs gspahppipl agaggaagir pdsgpalask
      181 dmpe
//
LOCUS       WP_235213362             158 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: QsdR family transcriptional regulator
            [Amycolatopsis].
ACCESSION   WP_235213362
VERSION     WP_235213362.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis
  ORGANISM  Amycolatopsis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae.
REFERENCE   1  (residues 1 to 158)
  AUTHORS   El Sahili,A., Kwasiborski,A., Mothe,N., Velours,C., Legrand,P.,
            Morera,S. and Faure,D.
  TITLE     Natural Guided Genome Engineering Reveals Transcriptional
            Regulators Controlling Quorum-Sensing Signal Degradation
  JOURNAL   PLoS One 10 (11), e0141718 (2015)
   PUBMED   26554837
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037470.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18598.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Amycolatopsis"
                     /db_xref="taxon:1813"
     Protein         1..158
                     /product="QsdR family transcriptional regulator"
                     /calculated_mol_wt=17150
     Region          <1..>18
                     /region_name="HTH_Tnp_1_2"
                     /note="Helix-turn-helix of insertion element transposase;
                     pfam13022"
                     /db_xref="CDD:404044"
     Region          48..157
                     /region_name="TetR_C_36"
                     /note="Tetracyclin repressor-like, C-terminal domain;
                     pfam18598"
                     /db_xref="CDD:465816"
ORIGIN      
        1 mgelaselgi sratlhrwvg grdqllgeil wsmtvevfea rssgklgrga egiaelvgtf
       61 vrtvngskpf reflrneper alrilttkas vvqsraiakm refldeevea grltpplpie
      121 dlayllvrig esfiytdvit gdepdagkah aavtalls
//
LOCUS       WP_235213454             266 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Amycolatopsis sp. MJM2582].
ACCESSION   WP_235213454
VERSION     WP_235213454.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis sp. MJM2582
  ORGANISM  Amycolatopsis sp. MJM2582
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Amycolatopsis sp. MJM2582"
                     /db_xref="taxon:1427749"
     Protein         1..266
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=27636
     Region          17..>264
                     /region_name="efflux_EmrB"
                     /note="drug resistance transporter, EmrB/QacA subfamily;
                     TIGR00711"
                     /db_xref="CDD:129794"
ORIGIN      
        1 migspdeerl apalwgtaai ltiggflsmf tstvvtvalg tiaagfrasl gttqwiatgy
       61 llalaamvpv sgwacrrfgt trvwlvcvgl favfsalcaa apsvealivf hvlqgaaggl
      121 lvpagqilfa tmagpkrlgr mmavlsipiy lapvlgtlag svlaerfgvp wlflvnvpla
      181 llclllgrkr lpregpadtr pldwrglalt vtglpllvyg faeaapiaaa agalllavfv
      241 vtalrspapl ldlrlfrdrt fssarg
//
LOCUS       WP_235213469             209 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Amycolatopsis sp. MJM2582].
ACCESSION   WP_235213469
VERSION     WP_235213469.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis sp. MJM2582
  ORGANISM  Amycolatopsis sp. MJM2582
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
REFERENCE   1  (residues 1 to 209)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Amycolatopsis sp. MJM2582"
                     /db_xref="taxon:1427749"
     Protein         1..209
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=21781
     Region          23..178
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mpirthavtv vfagvpeppa sselevvaht pdereavwha ralrpdvlvl svhppaldgl
       61 avtrevssrv pdtavlvltp pgdgelvvaa mlagargvls rgagpddlir firgvaagav
      121 vfgeraadgl ygllsasqpm rafprltpre hevldhlagg ltipdvarrl glapktvrnv
      181 vtsiqakagt ddrevllaqa rnaglgrhs
//
LOCUS       WP_235213499             250 aa            linear   BCT 02-MAR-2025
DEFINITION  GP88 family protein [Amycolatopsis sp. MJM2582].
ACCESSION   WP_235213499
VERSION     WP_235213499.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis sp. MJM2582
  ORGANISM  Amycolatopsis sp. MJM2582
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036314.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17338.8
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Amycolatopsis sp. MJM2582"
                     /db_xref="taxon:1427749"
     Protein         1..250
                     /product="GP88 family protein"
                     /calculated_mol_wt=28072
     Region          5..226
                     /region_name="GP88"
                     /note="Gene product 88; pfam17338"
                     /db_xref="CDD:435872"
ORIGIN      
        1 mmtllrqnse lkklgiwnws lpafagklpd grnyntcpsa gvcaqacyar ngtylfpnvk
       61 arhqknlalv lddlpgwita mqkelshnkf tdawvrihds gdffsraylt awlevmaarp
      121 rtrfyaytke vamfrelvep rsprnfwwvy syggtqdhsl dpdldrvadv fadeaaidea
      181 gwhsqsesdl ravigpapvg ipanniahfk arqagrrwsd wqasvdaara qrrarardta
      241 tpgatntqpt
//
LOCUS       WP_235213510             138 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Amycolatopsis sp. MJM2582].
ACCESSION   WP_235213510
VERSION     WP_235213510.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis sp. MJM2582
  ORGANISM  Amycolatopsis sp. MJM2582
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
REFERENCE   1  (residues 1 to 138)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 138)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Amycolatopsis sp. MJM2582"
                     /db_xref="taxon:1427749"
     Protein         1..138
                     /product="VOC family protein"
                     /calculated_mol_wt=14340
     Region          9..128
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mmkahvssil lgvkdlatsk afyteglgwk ikddygvsvf fepdggsrvg fygreglagq
       61 vgtspegsgf sglvltyvvr searvdeiga eaekagatil kpagalpwgg yggtfadldg
      121 yiwsigysak gtdqpyae
//
LOCUS       WP_235213525             444 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Amycolatopsis sp. MJM2582].
ACCESSION   WP_235213525
VERSION     WP_235213525.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis sp. MJM2582
  ORGANISM  Amycolatopsis sp. MJM2582
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Amycolatopsis sp. MJM2582"
                     /db_xref="taxon:1427749"
     Protein         1..444
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47384
     Region          22..432
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(30..31,34..35,38,70,120..121,123..125,128,149,
                     152..153,251,254,256,259..261,264,292,296,344..345,353,
                     357,373,376..377,380..381,384)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 masrstmspr rarfvrnwtg rlvafgefid gydllvigaa vlflkpsfhl tasqvglvta
       61 aafvgtalgl vvfgdlsdrf grrlifminl avfvvaslaa afvqdvwqlv aarfvlgvav
      121 gmdiptshaf lteiapksrr griagslpnm mwlggavtsv llalalqplf gdetwrwlfg
      181 laalpaaavl varqflpesp rwlsargrve earriydalg leppkhevpe rrsyrmlvsg
      241 gawrrlatvt affaiqafgg avatvagpli isstgigvsn tlyfsllgfv vgliavvaga
      301 aiidrvnrrw lgvwtclgvf gaglgiaftg eragvglvgf wvvyamltwf gpgvlswvws
      361 teafptslrg lgsgiaqcvt rlaialnvfl apmlaqkhgv tvvawyacaf lvsavivlls
      421 pwlattgvel eetngvesgk pesr
//
LOCUS       WP_235213291              91 aa            linear   BCT 02-MAR-2025
DEFINITION  dsRBD fold-containing protein [Amycolatopsis sp. MJM2582].
ACCESSION   WP_235213291
VERSION     WP_235213291.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis sp. MJM2582
  ORGANISM  Amycolatopsis sp. MJM2582
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
REFERENCE   1  (residues 1 to 91)
  AUTHORS   Bunker,R.D., Mandal,K., Bashiri,G., Chaston,J.J., Pentelute,B.L.,
            Lott,J.S., Kent,S.B. and Baker,E.N.
  TITLE     A functional role of Rv1738 in Mycobacterium tuberculosis
            persistence suggested by racemic protein crystallography
  JOURNAL   Proc Natl Acad Sci U S A 112 (14), 4310-4315 (2015)
   PUBMED   25831534
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020532.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08962.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Amycolatopsis sp. MJM2582"
                     /db_xref="taxon:1427749"
     Protein         1..91
                     /product="dsRBD fold-containing protein"
                     /calculated_mol_wt=9546
     Region          4..78
                     /region_name="Rv2632c-like"
                     /note="pfam08962"
                     /db_xref="CDD:430346"
ORIGIN      
        1 mtdkwtidvs lqhepyrvra eallrledgg efvgvgiaea glrngassqi gsylavtral
       61 sdltaellet vasdvarsve vdgllatqst n
//
LOCUS       WP_235213426             180 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase [Amycolatopsis sp. MJM2582].
ACCESSION   WP_235213426
VERSION     WP_235213426.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis sp. MJM2582
  ORGANISM  Amycolatopsis sp. MJM2582
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
REFERENCE   1  (residues 1 to 180)
  AUTHORS   Brede,D.A., Faye,T., Johnsborg,O., Odegard,I., Nes,I.F. and Holo,H.
  TITLE     Molecular and genetic characterization of propionicin F, a
            bacteriocin from Propionibacterium freudenreichii
  JOURNAL   Appl Environ Microbiol 70 (12), 7303-7310 (2004)
   PUBMED   15574930
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019982.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08386.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Amycolatopsis sp. MJM2582"
                     /db_xref="taxon:1427749"
     Protein         1..180
                     /product="alpha/beta hydrolase"
                     /calculated_mol_wt=19897
     Region          102..175
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 mtakyfelaa rldrtpspdg ynaqvfrhvt fadlyydksl phlaatwhsl dtgkpvptss
       61 gtafpsdnyi asrlhvicnd sdwsedvgty rrdvaidrir hplfgaatan itpcafwpse
      121 siaarrtlga rklreafger akmvtvgqgg hlaylfkdne candlaaefl vrgtrhdfac
//
LOCUS       WP_235213643             629 aa            linear   BCT 02-MAR-2025
DEFINITION  M66 family metalloprotease [Burkholderia pseudomallei].
ACCESSION   WP_235213643
VERSION     WP_235213643.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 629)
  AUTHORS   Lathem,W.W., Grys,T.E., Witowski,S.E., Torres,A.G., Kaper,J.B.,
            Tarr,P.I. and Welch,R.A.
  TITLE     StcE, a metalloprotease secreted by Escherichia coli O157:H7,
            specifically cleaves C1 esterase inhibitor
  JOURNAL   Mol Microbiol 45 (2), 277-288 (2002)
   PUBMED   12123444
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021945.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10462.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..629
                     /product="M66 family metalloprotease"
                     /calculated_mol_wt=65303
     Region          1..>59
                     /region_name="SCO0930_lipo"
                     /note="SCO0930 family lipoprotein; NF040526"
                     /db_xref="CDD:468525"
     Region          134..441
                     /region_name="Peptidase_M66"
                     /note="Peptidase M66; pfam10462"
                     /db_xref="CDD:287440"
ORIGIN      
        1 mlaacggdds anaptaggaa pltpavaspa gptgstpgst pgattapaps stsagqlsvd
       61 kmafaqthvv psgglswtlp nasaslrpis rrdalvlvai gqadavqpvl eawkdgaklg
      121 alalsppsal pptesggray andrwsavvp aawmvpgvsf svsasnytss vaqapvfgtd
      181 advqltilpf ylfgaddtns pplsttqapd aatqqeifak wptaelkvrt hpagrfslat
      241 vvvgpradrt gaaqpaypvt aldqqkdgyg vmsamltlit nmrtangdgp lnnqyyapli
      301 alnsngqfan lggglggvgs gaavgdhryt gifiheqgha fglnhagdey akgaypyagg
      361 slsgsvwgyd pnhrefldvl vpttassyak casshqldaq grcykqdpmq ggagdqssgy
      421 kfatfsdynt grmqawiasr vladpasstg yskwdsaaqa rapympttdn nglygvnqnl
      481 pvqagvpvht ivvsfskags agasyiyppf sytgnliatf dptsaadrqa itvdkgtypw
      541 yckgtgcdyt lrvtyadgsr tyrvlqggfr awwtptvdda natnplsgss frvwainvpg
      601 dkrigkiell dtpmvwngmp anptvllsr
//
LOCUS       WP_235213797             224 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: flagellar biosynthetic protein FliO [Lysinibacillus].
ACCESSION   WP_235213797
VERSION     WP_235213797.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus
  ORGANISM  Lysinibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Fabiani,F.D., Renault,T.T., Peters,B., Dietsche,T., Galvez,E.J.C.,
            Guse,A., Freier,K., Charpentier,E., Strowig,T., Franz-Wachtel,M.,
            Macek,B., Wagner,S., Hensel,M. and Erhardt,M.
  TITLE     A flagellum-specific chaperone facilitates assembly of the core
            type III export apparatus of the bacterial flagellum
  JOURNAL   PLoS Biol 15 (8), e2002267 (2017)
   PUBMED   28771474
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 224)
  AUTHORS   Minamino,T. and Macnab,R.M.
  TITLE     Components of the Salmonella flagellar export apparatus and
            classification of export substrates
  JOURNAL   J Bacteriol 181 (5), 1388-1394 (1999)
   PUBMED   10049367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016250.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04347.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Lysinibacillus"
                     /db_xref="taxon:400634"
     Protein         1..224
                     /product="flagellar biosynthetic protein FliO"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0044781 - bacterial-type flagellum
                     organization [Evidence IEA]"
                     /calculated_mol_wt=25524
     Region          6..219
                     /region_name="FliO"
                     /note="Flagellar biosynthesis protein, FliO; cl01247"
                     /db_xref="CDD:445331"
ORIGIN      
        1 mlksfrftmi faflvsflfl yptptsvyad sdtnsvtdci kdpeacygdt tdpaakqeps
       61 vsaagdisaw eyikmvlali fvvalfyglm kflnkrnlnf qrnqliqnlg glslgaqksv
      121 qllqvgktmy lvgvgedvql lreitdpeei eallalyner qelaatspyi aevfskfkkk
      181 drvnmqneqk qetfgklfek kiseikqers eeierwkqke kddk
//
LOCUS       WP_235213910             345 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase family 8 [Lysinibacillus fusiformis].
ACCESSION   WP_235213910
VERSION     WP_235213910.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus fusiformis
  ORGANISM  Lysinibacillus fusiformis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 345)
  AUTHORS   Alzari,P.M., Souchon,H. and Dominguez,R.
  TITLE     The crystal structure of endoglucanase CelA, a family 8 glycosyl
            hydrolase from Clostridium thermocellum
  JOURNAL   Structure 4 (3), 265-275 (1996)
   PUBMED   8805535
  REMARK    Erratum:[Structure 1996 May 15;4(5):633]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013438.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01270.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Lysinibacillus fusiformis"
                     /db_xref="taxon:28031"
     Protein         1..345
                     /product="glycosyl hydrolase family 8"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=39509
ORIGIN      
        1 mlivsvvfll icctekeval qkepatspte qfviedlmng kgllrtdldt qkdvflsesv
       61 glwlaylvek ddqarfdeqv dvlksyflsn dfivwrldgt kkasvnalid dlriirvlld
      121 asekwhdsdy eqlgkqigdn liqygmnqel fvdyvdvnsh dkataltmsy impsafyeme
      181 qhgllsqqqv qhqldilqnt piaeagffpk yfdlatksyv fdeelhmidq lytayhlasm
      241 dgdtmpfknw lvnllkrdgk lygrysaktn qptvnfespa vyamaaryml alneqqlaqq
      301 fmekmtalkd pssgyidkht ksthsfdnll pllaereven ayhnk
//
LOCUS       WP_235213990             225 aa            linear   BCT 02-MAR-2025
DEFINITION  PIN domain-containing protein [Pseudomonas aeruginosa].
ACCESSION   WP_235213990
VERSION     WP_235213990.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 225)
  AUTHORS   Matelska,D., Steczkiewicz,K. and Ginalski,K.
  TITLE     Comprehensive classification of the PIN domain-like superfamily
  JOURNAL   Nucleic Acids Res 45 (12), 6995-7020 (2017)
   PUBMED   28575517
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036878.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18475.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..225
                     /product="PIN domain-containing protein"
                     /calculated_mol_wt=24986
     Region          11..110
                     /region_name="PIN7"
                     /note="PIN domain; pfam18475"
                     /db_xref="CDD:436528"
ORIGIN      
        1 mddemtqrli lvdyenigki dlslldasyr aiifvgakqn tpkasrkpst ahrfsrvdfq
       61 kiegvgknal dfhiafqlgr tfetapetqc ivlskdkgfd pllaylnkng lacqriaale
      121 dllpaelpvt vqqtlenack rcgrascveh lggqwcshcg hfssppdpqq mpsrqakyra
      181 kknesygyep lmgtcawchq rtdmsggiyd dgewmcpsci sgyar
//
LOCUS       WP_235214035             465 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidoglycan bridge formation glycyltransferase FemA/FemB family
            protein [Treponema pallidum].
ACCESSION   WP_235214035
VERSION     WP_235214035.1
KEYWORDS    RefSeq.
SOURCE      Treponema pallidum
  ORGANISM  Treponema pallidum
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Spirochaetales; Treponemataceae; Treponema.
REFERENCE   1  (residues 1 to 465)
  AUTHORS   Vannuffel,P., Heusterspreute,M., Bouyer,M., Vandercam,B.,
            Philippe,M. and Gala,J.L.
  TITLE     Molecular characterization of femA from Staphylococcus hominis and
            Staphylococcus saprophyticus, and femA-based discrimination of
            staphylococcal species
  JOURNAL   Res Microbiol 150 (2), 129-141 (1999)
   PUBMED   10209768
REFERENCE   2  (residues 1 to 465)
  AUTHORS   Ehlert,K., Schroder,W. and Labischinski,H.
  TITLE     Specificities of FemA and FemB for different glycine residues: FemB
            cannot substitute for FemA in staphylococcal peptidoglycan
            pentaglycine side chain formation
  JOURNAL   J Bacteriol 179 (23), 7573-7576 (1997)
   PUBMED   9393725
REFERENCE   3  (residues 1 to 465)
  AUTHORS   Stranden,A.M., Ehlert,K., Labischinski,H. and Berger-Bachi,B.
  TITLE     Cell wall monoglycine cross-bridges and methicillin
            hypersusceptibility in a femAB null mutant of methicillin-resistant
            Staphylococcus aureus
  JOURNAL   J Bacteriol 179 (1), 9-16 (1997)
   PUBMED   8981974
REFERENCE   4  (residues 1 to 465)
  AUTHORS   Henze,U., Sidow,T., Wecke,J., Labischinski,H. and Berger-Bachi,B.
  TITLE     Influence of femB on methicillin resistance and peptidoglycan
            metabolism in Staphylococcus aureus
  JOURNAL   J Bacteriol 175 (6), 1612-1620 (1993)
   PUBMED   8383661
REFERENCE   5  (residues 1 to 465)
  AUTHORS   Berger-Bachi,B., Barberis-Maino,L., Strassle,A. and Kayser,F.H.
  TITLE     FemA, a host-mediated factor essential for methicillin resistance
            in Staphylococcus aureus: molecular cloning and characterization
  JOURNAL   Mol Gen Genet 219 (1-2), 263-269 (1989)
   PUBMED   2559314
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014445.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02388.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Treponema pallidum"
                     /db_xref="taxon:160"
     Protein         1..465
                     /product="peptidoglycan bridge formation glycyltransferase
                     FemA/FemB family protein"
                     /GO_function="GO:0016755 - aminoacyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0044038 - cell wall macromolecule
                     biosynthetic process [Evidence IEA]"
                     /calculated_mol_wt=52372
     Region          23..428
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
ORIGIN      
        1 melfgryldp vhgeqyngcp mfvvtvqkwt qetwtaetfl qspawahfkr aygwqtyvfs
       61 vhvrpdantg gekhfpllil cknikpfgvf ayapgappyl qddqipsrqm ararasllre
      121 ltsallpffv rkpflvrfdp pwgwaaavcs lpslasssth cavgtemelf trelhacglr
      181 raacnvqpqd tllldmrpar edifaafkpk wrynvrraqk hgvrvarfdt laqegspgsl
      241 raavdvfyal yqktaardri aihtrqyyrd fctafaaqgm lvlclayapr aalrvriagk
      301 dtpknietph ppasedrelg cadeqaiaal vllcfdtcat yvygasdysa rhlmapyalq
      361 wyaiqearar gclwydfygi pptddvrhpm hglyrfktgf ggfvfhrvgs vdmpvrqlha
      421 aayacaervr mgwfkrvrrm vcaclqslgr qrtqnysaht agaga
//
LOCUS       WP_235214048             568 aa            linear   BCT 02-MAR-2025
DEFINITION  6-hydroxymethylpterin diphosphokinase MptE-like protein [Treponema
            pallidum].
ACCESSION   WP_235214048
VERSION     WP_235214048.1
KEYWORDS    RefSeq.
SOURCE      Treponema pallidum
  ORGANISM  Treponema pallidum
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Spirochaetales; Treponemataceae; Treponema.
REFERENCE   1  (residues 1 to 568)
  AUTHORS   de Crecy-Lagard,V., Phillips,G., Grochowski,L.L., El Yacoubi,B.,
            Jenney,F., Adams,M.W., Murzin,A.G. and White,R.H.
  TITLE     Comparative genomics guided discovery of two missing archaeal
            enzyme families involved in the biosynthesis of the pterin moiety
            of tetrahydromethanopterin and tetrahydrofolate
  JOURNAL   ACS Chem Biol 7 (11), 1807-1816 (2012)
   PUBMED   22931285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014075.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01973.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Treponema pallidum"
                     /db_xref="taxon:160"
     Protein         1..568
                     /product="6-hydroxymethylpterin diphosphokinase MptE-like
                     protein"
                     /calculated_mol_wt=63974
     Region          68..>367
                     /region_name="Maf_flag10_N"
                     /note="Glycosyltransferase Maf N-terminal domain; cl46809"
                     /db_xref="CDD:481149"
ORIGIN      
        1 mgtsdvagvr gdvpslpprl iktqngftvl yrntylysky raqdaherav arlavkphtl
       61 vlccapvlgh glcalltrmp pssfllclec dlqlmhlfmq haprqlitaq nvyvlytthi
      121 tqvlhtverl trfpfkqilk iagsgayaqy rnfydeseqn irtlidtfwi nkitlihsgr
      181 nyarnifsny itqlqnpshi hhlvpqsidk pllivgagpa ldacrsfcar mkdtifllav
      241 dvacnallpd ivpdavvlle sqfwieqafi gtlprtvalf adlsafprav raanvpthff
      301 ftpythaafi kraqnagvvp lsihpsgsvg laalqlalrl rkkgvpifht glnfswnkgf
      361 thargsapvq rlyhsttrlh slypdcalfp egirslkgkr yavqsipnlv hyahayrtlc
      421 aehphlydld qeglalttsh tvshaqacei ithcctrrhr thvpilhtqd aqisfafsqk
      481 paedfclrvk elltteraal lqlkhmltta tpsnqdvira lirrsdylyl hfpdgeraey
      541 leynflcrvr aeldfflkll sripssld
//
LOCUS       WP_235214115             274 aa            linear   BCT 02-MAR-2025
DEFINITION  histidine kinase dimerization/phospho-acceptor domain-containing
            protein [Treponema pallidum].
ACCESSION   WP_235214115
VERSION     WP_235214115.1
KEYWORDS    RefSeq.
SOURCE      Treponema pallidum
  ORGANISM  Treponema pallidum
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Spirochaetales; Treponemataceae; Treponema.
REFERENCE   1  (residues 1 to 274)
  AUTHORS   Li,Y., Bahti,P., Shaw,N., Song,G., Chen,S., Zhang,X., Zhang,M.,
            Cheng,C., Yin,J., Zhu,J.Y., Zhang,H., Che,D., Xu,H., Abbas,A.,
            Wang,B.C. and Liu,Z.J.
  TITLE     Crystal structure of a novel non-Pfam protein AF1514 from
            Archeoglobus fulgidus DSM 4304 solved by S-SAD using a Cr X-ray
            source
  JOURNAL   Proteins 71 (4), 2109-2113 (2008)
   PUBMED   18361456
REFERENCE   2  (residues 1 to 274)
  AUTHORS   Bilwes,A.M., Alex,L.A., Crane,B.R. and Simon,M.I.
  TITLE     Structure of CheA, a signal-transducing histidine kinase
  JOURNAL   Cell 96 (1), 131-141 (1999)
   PUBMED   9989504
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012722.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00512.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Treponema pallidum"
                     /db_xref="taxon:160"
     Protein         1..274
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /GO_function="GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=31361
     Region          14..>253
                     /region_name="NtrY"
                     /note="Signal transduction histidine kinase NtrY involved
                     in nitrogen fixation and metabolism regulation [Signal
                     transduction mechanisms]; COG5000"
                     /db_xref="CDD:444024"
ORIGIN      
        1 mrdfiaralk ksakmndsql rnmieliane ytlldalmds lnyglivldc lhiplktnra
       61 iarllgkplp snprrplwhy lddehiaqfi vaiiknevgk araefivqrq getlylevsl
      121 fplicdqkir gsiiaihdit ekkqeeiynr rleslanltn laatvaheik nplgamsihl
      181 qllrknfstc sfetnkriqk hlhvveeeie rlnrivtgfl savrplklni trlsvfdlvt
      241 sirdtfmkps pkqnclslyi chtifptyea mntc
//
LOCUS       WP_235214164             157 aa            linear   BCT 02-MAR-2025
DEFINITION  lysozyme inhibitor LprI family protein [Comamonas testosteroni].
ACCESSION   WP_235214164
VERSION     WP_235214164.1
KEYWORDS    RefSeq.
SOURCE      Comamonas testosteroni
  ORGANISM  Comamonas testosteroni
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Comamonas.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Sethi,D., Mahajan,S., Singh,C., Lama,A., Hade,M.D., Gupta,P. and
            Dikshit,K.L.
  TITLE     Lipoprotein LprI of Mycobacterium tuberculosis Acts as a Lysozyme
            Inhibitor
  JOURNAL   J Biol Chem 291 (6), 2938-2953 (2016)
   PUBMED   26589796
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018684.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07007.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Comamonas testosteroni"
                     /db_xref="taxon:285"
     Protein         1..157
                     /product="lysozyme inhibitor LprI family protein"
                     /calculated_mol_wt=17194
     Region          32..137
                     /region_name="LprI"
                     /note="Lysozyme inhibitor LprI; cl01530"
                     /db_xref="CDD:470238"
ORIGIN      
        1 myaqelsrcp sqrpatgtag iaarplarlc alavsgllli plpataaqeg dqdpphcpsg
       61 qplslaclqq qaqviersmq vlylslqrrl pqasaralqt eqqewtqerd rrcqpngyvh
      121 eaedmaacri gmalsrvvvf knqwhplawn eqggeqp
//
LOCUS       WP_235214176             265 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: phospholipase D-like domain-containing protein
            [Comamonas].
ACCESSION   WP_235214176
VERSION     WP_235214176.1
KEYWORDS    RefSeq.
SOURCE      Comamonas
  ORGANISM  Comamonas
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13091.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Comamonas"
                     /db_xref="taxon:283"
     Protein         1..265
                     /product="phospholipase D-like domain-containing protein"
                     /calculated_mol_wt=29411
     Region          <1..102
                     /region_name="PLDc_SF"
                     /note="Catalytic domain of phospholipase D superfamily
                     proteins; cl15239"
                     /db_xref="CDD:472788"
     Site            order(52,54,67,69,80)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197267"
     Site            52
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197267"
ORIGIN      
        1 mqalvaaknr svkgrvvvdk krnkgktskk amvfatsngv dsrtndhfhi hhdkviivdg
       61 staetgsfnf apsaetanse kvvvirdmpe vakqyiahwq srgdlgkpyp pidllppthl
      121 ylkpapagff yfwslnvqeh eyfppehqhp sppprafsfr mtscqegrsv swrpchggan
      181 mtsnasvtvq tyryellpsn lhadwkiivd rvraaydkkp esaiqlenar qhgfgfvral
      241 aaaglvtvag kadlmellly prssc
//
LOCUS       WP_235214267             382 aa            linear   BCT 02-MAR-2025
DEFINITION  pyridoxal-phosphate dependent enzyme [Rhodococcus opacus].
ACCESSION   WP_235214267
VERSION     WP_235214267.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus opacus
  ORGANISM  Rhodococcus opacus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012512.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00291.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Rhodococcus opacus"
                     /db_xref="taxon:37919"
     Protein         1..382
                     /product="pyridoxal-phosphate dependent enzyme"
                     /calculated_mol_wt=39887
     Region          23..349
                     /region_name="Trp-synth-beta_II"
                     /note="Tryptophan synthase beta superfamily (fold type
                     II); this family of pyridoxal phosphate (PLP)-dependent
                     enzymes catalyzes beta-replacement and beta-elimination
                     reactions. This CD corresponds to
                     aminocyclopropane-1-carboxylate deaminase (ACCD),
                     tryptophan...; cl00342"
                     /db_xref="CDD:444852"
     Site            order(76..77,103,208..212,316,344..345)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:107206"
     Site            77
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:107206"
ORIGIN      
        1 mnlhtnfldy dpvasadpne pgifrwragy piaptsrpvs lgegstpair sealakhlgv
       61 rsvilkdesq nptssykdrl aavaitkave mgartvvvas tgnhgaataa yaaaaglecv
      121 vlaarsasvl mveqmrayga rvialptipd rwtvmragie efgwfpvsgy sgppigsppy
      181 giegyksiaf elyeqlggsp skvivptayg dgltgiargf eelraighid alprmiaaea
      241 lgphargirn dcgdvvpeie rqptlafsag tpvgtyqtla tirrtegaat gpvsdreild
      301 aqtliarttg iyaettsams lavavqlrds galsskdqiv lvitssglks aaetsaqrad
      361 ipvieptita lrtvlqgssd ng
//
LOCUS       WP_235214273             509 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: hydantoinase B/oxoprolinase family protein
            [Rhodococcus].
ACCESSION   WP_235214273
VERSION     WP_235214273.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus
  ORGANISM  Rhodococcus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae.
REFERENCE   1  (residues 1 to 509)
  AUTHORS   Watabe,K., Ishikawa,T., Mukohara,Y. and Nakamura,H.
  TITLE     Cloning and sequencing of the genes involved in the conversion of
            5-substituted hydantoins to the corresponding L-amino acids from
            the native plasmid of Pseudomonas sp. strain NS671
  JOURNAL   J Bacteriol 174 (3), 962-969 (1992)
   PUBMED   1732229
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10000641
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Rhodococcus"
                     /db_xref="taxon:1827"
     Protein         1..509
                     /product="hydantoinase B/oxoprolinase family protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=53460
     Region          33..505
                     /region_name="HyuB"
                     /note="N-methylhydantoinase B/oxoprolinase/acetone
                     carboxylase, alpha subunit [Amino acid transport and
                     metabolism, Secondary metabolites biosynthesis, transport
                     and catabolism]; COG0146"
                     /db_xref="CDD:439916"
ORIGIN      
        1 mragegiggf epgcgftepc ddvgsggghr tlrifegrla agdavlvndp ysgaqhtpdi
       61 llfspvvvdd dvvgyvgsva hhidvggrva gsvagdnrni fqeglrippi iayrngvide
      121 tfasilaanv rlpevtfgdl qaqlsanmlg vsrvhgiaqe hgtrnvltam drsieatete
      181 frkrmadlpd acgtgedfve ddglgngplt vkvsveitgd glvvdftgss pqtdgpinsv
      241 lsattasvly virsvfgpdl pandglnsav rivapsgtiv nptsptacgg rmqtcyrvvd
      301 allracatft pdrytagscg nmtmslqfdr raghapiffe vmpgalgarp eddgidgtdv
      361 hishcmnapi ealeaefpie ftcfefrpds cgagrfqggl glrrgfrlre lggelmirgd
      421 qvtsgpggva ggadgqpcrf vlnpgteher vlpsktlval avgdeflret aggggigtgc
      481 drdpalvtrd laderiskky ihthysqli
//
LOCUS       WP_235214320             407 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rhodococcus opacus].
ACCESSION   WP_235214320
VERSION     WP_235214320.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus opacus
  ORGANISM  Rhodococcus opacus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Rhodococcus opacus"
                     /db_xref="taxon:37919"
     Protein         1..407
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=42701
     Region          1..389
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(4..5,8..9,12,44,94..95,97..99,102,122,125..126,129,
                     209,212..213,216..218,221,249,253,311..312,316,320,336,
                     339..340,343..344,347)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340877"
ORIGIN      
        1 mllnfadkav lgfagvhimk dlgltpqqfg mvqsaffwlf avgaivigal tskinvrwll
       61 favmlvwivt mlpllgpvsl ivllacriml gfaegpafal athvvhswfp perralpagv
      121 vaagasigpl iaaptltwvi vtwswhaafg vliaaglvws iawlllgkda pesvttrnpe
      181 ttaaadlpae apyrvllttg tivgialltf fsywsttlki swlplflsdg lgydtitagr
      241 litlpyavaa vasisaglls ntltargvsr ritrgyltgg lvvaagvsmf lfttigtgpl
      301 qmvlitlafs lntaayavaf vavgdlvhpk qrgtilgclv afysmagvia plllghfvgd
      361 aadkasgygq gfaitgllmv fgglaatflv rpdrdavkis arvevsk
//
LOCUS       WP_235214316             201 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: zinc-binding dehydrogenase [Rhodococcus].
ACCESSION   WP_235214316
VERSION     WP_235214316.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus
  ORGANISM  Rhodococcus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00107.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Rhodococcus"
                     /db_xref="taxon:1827"
     Protein         1..201
                     /product="zinc-binding dehydrogenase"
                     /calculated_mol_wt=20529
     Region          <22..200
                     /region_name="AdhP"
                     /note="D-arabinose 1-dehydrogenase, Zn-dependent alcohol
                     dehydrogenase family [Carbohydrate transport and
                     metabolism]; COG1064"
                     /db_xref="CDD:440684"
ORIGIN      
        1 mataavaaca vgscvqalag aanlrpedtv litgaggglg ihalqvaaak garvialtss
       61 askieslrky gahevvlstd dpvthladlt rghgvdvvld nvglpsvfdt gfralarrgr
      121 yvltgqlere kislypafvf fkeavitgsa stssksflea ielvasgsvt gvtteysldq
      181 vvdahraven savlgravlv p
//
LOCUS       WP_235214509             399 aa            linear   BCT 02-MAR-2025
DEFINITION  DDE-type integrase/transposase/recombinase [Rhodococcus opacus].
ACCESSION   WP_235214509
VERSION     WP_235214509.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus opacus
  ORGANISM  Rhodococcus opacus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 399)
  AUTHORS   Dyda,F., Hickman,A.B., Jenkins,T.M., Engelman,A., Craigie,R. and
            Davies,D.R.
  TITLE     Crystal structure of the catalytic domain of HIV-1 integrase:
            similarity to other polynucleotidyl transferases
  JOURNAL   Science 266 (5193), 1981-1986 (1994)
   PUBMED   7801124
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012870.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00665.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Rhodococcus opacus"
                     /db_xref="taxon:37919"
     Protein         1..399
                     /product="DDE-type integrase/transposase/recombinase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=44160
     Region          29..312
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 mtgtdavmdl lhallvlaha tgadmfdgnf arwcadhgis ratayrhkkr ieeegrwttr
       61 srrptscpha tplpveieiv rlrlnlphhe rgadtiayhl qavaekhdwa aegwtipsra
      121 tintilsryd lvipepkkrp kssyrrfcyr nprdcyqida tqvrlatgek vvvfevlddc
      181 trtlvatrva daetaagaia aitaaftgfg ipalvladng saftsrrtkg gisgftrvve
      241 qagarlihst pyhpqtcgkv erhhrtfkqw laarpttaat taelqqlcet yqrfynterp
      301 hsavkmpplq awrnaaihgg pqhlpiqhda tvhalvvsst gtvcvdsrar lsvgrkmagq
      361 tvtllrdddh vtayttdgdv ighlhldhtk ryqgklrpa
//
LOCUS       WP_235214590             373 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3500 domain-containing protein [Rhodococcus opacus].
ACCESSION   WP_235214590
VERSION     WP_235214590.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus opacus
  ORGANISM  Rhodococcus opacus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12006.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Rhodococcus opacus"
                     /db_xref="taxon:37919"
     Protein         1..373
                     /product="DUF3500 domain-containing protein"
                     /calculated_mol_wt=39306
     Region          71..370
                     /region_name="DUF3500"
                     /note="Protein of unknown function (DUF3500); pfam12006"
                     /db_xref="CDD:432257"
ORIGIN      
        1 mrtqnsrvts pkklivassm tmllglslva cgtdsdtttp apgsasssva atmatadags
       61 vaagaeafaa tltddqkasl qqeyslenaq kwsnlpqall rggqgriglq lselddtqia
      121 aldtllqavt gsatgdgyde iqqllnaddy laangggtdy grgnyyiafl gtpsdsgtwe
      181 lqfgghhlaf antyvdgalv gatpsfrgve pfgtfeqngt snsplaneqs sfaallagls
      241 teelatakld svysdlvlrp gndwafpttk egvqvstftp eqkqlvmaai atyvddidda
      301 dattilakye relgqtyvsy sgstgvteqn dyvridgpsv wiefsmqhgi vlsgnhphsv
      361 wrdrttdygg tqe
//
LOCUS       WP_235214470             114 aa            linear   BCT 02-MAR-2025
DEFINITION  LiaF domain-containing protein [Rhodococcus opacus].
ACCESSION   WP_235214470
VERSION     WP_235214470.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus opacus
  ORGANISM  Rhodococcus opacus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 114)
  AUTHORS   Kato,Y., Suzuki,T., Ida,T. and Maebashi,K.
  TITLE     Genetic changes associated with glycopeptide resistance in
            Staphylococcus aureus: predominance of amino acid substitutions in
            YvqF/VraSR
  JOURNAL   J Antimicrob Chemother 65 (1), 37-45 (2010)
   PUBMED   19889788
REFERENCE   2  (residues 1 to 114)
  AUTHORS   Boyle-Vavra,S., Yin,S. and Daum,R.S.
  TITLE     The VraS/VraR two-component regulatory system required for
            oxacillin resistance in community-acquired methicillin-resistant
            Staphylococcus aureus
  JOURNAL   FEMS Microbiol Lett 262 (2), 163-171 (2006)
   PUBMED   16923071
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021443.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09922.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Rhodococcus opacus"
                     /db_xref="taxon:37919"
     Protein         1..114
                     /product="LiaF domain-containing protein"
                     /calculated_mol_wt=12040
     Region          <32..112
                     /region_name="LiaF"
                     /note="Membrane protein LiaF, inhibitor of the LiaRS
                     two-component envelope stress sensory system [Signal
                     transduction mechanisms]; COG4758"
                     /db_xref="CDD:443791"
ORIGIN      
        1 msrpqstivg ifgdtkrsgr wslavktlal lvfgdvkldl rsavigarts titlvtlfgd
       61 stitvpegvh vevggfdlfg dreldagahd pgpgaptiri vsyslfgdlr vrtr
//
LOCUS       WP_235214492             129 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6153 family protein [Rhodococcus opacus].
ACCESSION   WP_235214492
VERSION     WP_235214492.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus opacus
  ORGANISM  Rhodococcus opacus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 129)
  AUTHORS   Zhang,G., Zhang,W., Zhang,Q., Shi,T., Ma,L., Zhu,Y., Li,S.,
            Zhang,H., Zhao,Y.L., Shi,R. and Zhang,C.
  TITLE     Mechanistic insights into polycycle formation by reductive
            cyclization in ikarugamycin biosynthesis
  JOURNAL   Angew Chem Int Ed Engl 53 (19), 4840-4844 (2014)
   PUBMED   24706593
REFERENCE   2  (residues 1 to 129)
  AUTHORS   Antosch,J., Schaefers,F. and Gulder,T.A.
  TITLE     Heterologous reconstitution of ikarugamycin biosynthesis in E. coli
  JOURNAL   Angew Chem Int Ed Engl 53 (11), 3011-3014 (2014)
   PUBMED   24519911
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040012.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19650.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Rhodococcus opacus"
                     /db_xref="taxon:37919"
     Protein         1..129
                     /product="DUF6153 family protein"
                     /calculated_mol_wt=13315
     Region          18..129
                     /region_name="DUF6153"
                     /note="Family of unknown function (DUF6153); pfam19650"
                     /db_xref="CDD:466137"
ORIGIN      
        1 metatglrrt vvaraallia vaagvllmhs liaptaiaav heqppaaash aedphgcggd
       61 gceqphltgh qcaavivvia altsvmllww hsadpvgrrd rvsaarlqsg rgpppwtvfs
      121 laelsilrv
//
LOCUS       WP_235214452              96 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [Rhodococcus].
ACCESSION   WP_235214452
VERSION     WP_235214452.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus
  ORGANISM  Rhodococcus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae.
REFERENCE   1  (residues 1 to 96)
  AUTHORS   Lebel,S., Bouttier,S. and Lambert,T.
  TITLE     The cme gene of Clostridium difficile confers multidrug resistance
            in Enterococcus faecalis
  JOURNAL   FEMS Microbiol Lett 238 (1), 93-100 (2004)
   PUBMED   15336408
REFERENCE   2  (residues 1 to 96)
  AUTHORS   Furrer,J.L., Sanders,D.N., Hook-Barnard,I.G. and McIntosh,M.A.
  TITLE     Export of the siderophore enterobactin in Escherichia coli:
            involvement of a 43 kDa membrane exporter
  JOURNAL   Mol Microbiol 44 (5), 1225-1234 (2002)
   PUBMED   12068807
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017760.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05977.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Rhodococcus"
                     /db_xref="taxon:1827"
     Protein         1..96
                     /product="MFS transporter"
                     /calculated_mol_wt=10524
     Region          <15..>86
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mttsqtlfpa lgvvfavlvi plwsrrragt amprsperml paleastrfv rnsawtrrll
       61 yrlsvfgvps sclwallpvi aherlglsss qtdspt
//
LOCUS       WP_235214632             465 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein [Rhodococcus sp. JS3073].
ACCESSION   WP_235214632
VERSION     WP_235214632.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. JS3073
  ORGANISM  Rhodococcus sp. JS3073
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 465)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Rhodococcus sp. JS3073"
                     /db_xref="taxon:3002901"
     Protein         1..465
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=48145
     Region          2..465
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     Site            order(128..132,140,155,157..158,205..208,211,214..215,
                     229..231,263,367,369,395,433)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143395"
     Site            order(132,229,260,263)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143395"
ORIGIN      
        1 mdaidvfnpa tgrvitelvp atiedaeaav vaasrafadw gsrplservr flyrmkvile
       61 dnveslarti tidqgktlde argevgravd fletaiaapm lyhsdavnvt tgvdarrvre
      121 plgvcvavtp snfpvmntvq fsawalvtgn aliikaseqd plastaairl lqqaglpdgv
      181 lnlvhgradv vkhliahpsv vavscitssp taraiygaaa aagkrvqang gaknpivvaa
      241 dadldraaag ivsssygmag qrclagsrvv vvgdvygdlm drvvaladql vvgdgmdegv
      301 tmgpvvsaes kvrilaalge aedlgatfvl dgrnvkpvgg vgsengyfig ptvvadldpr
      361 hgvegrelfg pvinvhrvdt laeaialsnd tefgnaaavf tssgavaaef ergiragnvg
      421 vnafpappan vtmggygasf ygdshvcgaa pldfftdqkl vvtrw
//
LOCUS       WP_235214711             154 aa            linear   BCT 02-MAR-2025
DEFINITION  SAV_6107 family HEPN domain-containing protein [Rhodococcus
            opacus].
ACCESSION   WP_235214711
VERSION     WP_235214711.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus opacus
  ORGANISM  Rhodococcus opacus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 154)
  AUTHORS   Anantharaman,V., Makarova,K.S., Burroughs,A.M., Koonin,E.V. and
            Aravind,L.
  TITLE     Comprehensive analysis of the HEPN superfamily: identification of
            novel roles in intra-genomic conflicts, defense, pathogenesis and
            RNA processing
  JOURNAL   Biol Direct 8, 15 (2013)
   PUBMED   23768067
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037499.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18726.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Rhodococcus opacus"
                     /db_xref="taxon:37919"
     Protein         1..154
                     /product="SAV_6107 family HEPN domain-containing protein"
                     /calculated_mol_wt=15894
     Region          42..140
                     /region_name="HEPN_SAV_6107"
                     /note="SAV_6107-like HEPN; pfam18726"
                     /db_xref="CDD:436694"
ORIGIN      
        1 mtnpvtgpts gnsrrpgdvr npasrrgsvl ldradallaq svgaggpadr fhsaylaalr
       61 gagavlaave gaaagsrrtr trnawvlmad aapefgswad yfaghsatra aieagmsrtl
      121 tdleadeffv evgrflqave dhigrgagld lras
//
LOCUS       WP_235214826             264 aa            linear   BCT 02-MAR-2025
DEFINITION  D-glutamate cyclase family protein [Rhodococcus opacus].
ACCESSION   WP_235214826
VERSION     WP_235214826.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus opacus
  ORGANISM  Rhodococcus opacus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 264)
  AUTHORS   Ariyoshi,M., Katane,M., Hamase,K., Miyoshi,Y., Nakane,M.,
            Hoshino,A., Okawa,Y., Mita,Y., Kaimoto,S., Uchihashi,M., Fukai,K.,
            Ono,K., Tateishi,S., Hato,D., Yamanaka,R., Honda,S., Fushimura,Y.,
            Iwai-Kanai,E., Ishihara,N., Mita,M., Homma,H. and Matoba,S.
  TITLE     D-Glutamate is metabolized in the heart mitochondria
  JOURNAL   Sci Rep 7, 43911 (2017)
   PUBMED   28266638
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018937.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07286.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Rhodococcus opacus"
                     /db_xref="taxon:37919"
     Protein         1..264
                     /product="D-glutamate cyclase family protein"
                     /calculated_mol_wt=28175
     Region          1..250
                     /region_name="D-Glu_cyclase"
                     /note="D-glutamate cyclase; cl01790"
                     /db_xref="CDD:470346"
ORIGIN      
        1 mtvpapahpr dlrrlvaage wtaptagvld dyqqanllvv psaaaddfae ycrrnpdvcp
       61 llartdpgnp eltydnctvd irtmlpryrv wqhdtlvaep tdliaywrdd avafalgcsh
      121 tfdaplrrag ipvshapppv yvtdratlpa gvfagplavs mrpvptslvd taievtgryp
      181 tghgvpihvg dpaalgitdl trpefgsypg vpagstpvfw acgvtpqmai paahldyait
      241 hlaghmlvfd tlldavtpsv rtsr
//
LOCUS       WP_235214845              99 aa            linear   BCT 02-MAR-2025
DEFINITION  nitronate monooxygenase [Rhodococcus opacus].
ACCESSION   WP_235214845
VERSION     WP_235214845.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus opacus
  ORGANISM  Rhodococcus opacus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 99)
  AUTHORS   Gadda,G. and Francis,K.
  TITLE     Nitronate monooxygenase, a model for anionic flavin semiquinone
            intermediates in oxidative catalysis
  JOURNAL   Arch Biochem Biophys 493 (1), 53-61 (2010)
   PUBMED   19577534
REFERENCE   2  (residues 1 to 99)
  AUTHORS   Francis,K. and Gadda,G.
  TITLE     Kinetic evidence for an anion binding pocket in the active site of
            nitronate monooxygenase
  JOURNAL   Bioorg Chem 37 (5), 167-172 (2009)
   PUBMED   19683782
REFERENCE   3  (residues 1 to 99)
  AUTHORS   Ha,J.Y., Min,J.Y., Lee,S.K., Kim,H.S., Kim,D.J., Kim,K.H.,
            Lee,H.H., Kim,H.K., Yoon,H.J. and Suh,S.W.
  TITLE     Crystal structure of 2-nitropropane dioxygenase complexed with FMN
            and substrate. Identification of the catalytic base
  JOURNAL   J Biol Chem 281 (27), 18660-18667 (2006)
   PUBMED   16682407
REFERENCE   4  (residues 1 to 99)
  AUTHORS   Francis,K., Russell,B. and Gadda,G.
  TITLE     Involvement of a flavosemiquinone in the enzymatic oxidation of
            nitroalkanes catalyzed by 2-nitropropane dioxygenase
  JOURNAL   J Biol Chem 280 (7), 5195-5204 (2005)
   PUBMED   15582992
REFERENCE   5  (residues 1 to 99)
  AUTHORS   Gorlatova,N., Tchorzewski,M., Kurihara,T., Soda,K. and Esaki,N.
  TITLE     Purification, characterization, and mechanism of a flavin
            mononucleotide-dependent 2-nitropropane dioxygenase from Neurospora
            crassa
  JOURNAL   Appl Environ Microbiol 64 (3), 1029-1033 (1998)
   PUBMED   9501443
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015047.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03060.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Rhodococcus opacus"
                     /db_xref="taxon:37919"
     Protein         1..99
                     /product="nitronate monooxygenase"
                     /GO_function="GO:0018580 - nitronate monooxygenase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=10561
     Region          <8..93
                     /region_name="YrpB"
                     /note="NAD(P)H-dependent flavin oxidoreductase YrpB,
                     nitropropane dioxygenase family [General function
                     prediction only]; COG2070"
                     /db_xref="CDD:441673"
ORIGIN      
        1 mrdaltvarp taltraftgr sargirtrfl dehtatapaa ypeiqlrdva aaresggsea
       61 vtlwagqayr lakerpaaev vqrlvkgcra sleaaakri
//
LOCUS       WP_235214859             174 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6431 domain-containing protein [Rhodococcus opacus].
ACCESSION   WP_235214859
VERSION     WP_235214859.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus opacus
  ORGANISM  Rhodococcus opacus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040103.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20020.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Rhodococcus opacus"
                     /db_xref="taxon:37919"
     Protein         1..174
                     /product="DUF6431 domain-containing protein"
                     /calculated_mol_wt=19380
     Region          1..>96
                     /region_name="InsA"
                     /note="Transposase InsA [Mobilome: prophages,
                     transposons]; COG3677"
                     /db_xref="CDD:442893"
ORIGIN      
        1 mrcpqcrgtv arwghgrart vrsvgettlt vrpqrvrcrd cgathillpt alqvrradtt
       61 evignalahk akglgfrria armgrpestv rrwlrrttge hvqwlhrrgt erlvlvarea
      121 fgtiryvgnp lgdalcvlsa aavedrrrfg fpdppwdlig iytqgrllsp prsg
//
LOCUS       WP_235214866             267 aa            linear   BCT 02-MAR-2025
DEFINITION  enoyl-CoA hydratase-related protein [Rhodococcus opacus].
ACCESSION   WP_235214866
VERSION     WP_235214866.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus opacus
  ORGANISM  Rhodococcus opacus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012596.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00378.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Rhodococcus opacus"
                     /db_xref="taxon:37919"
     Protein         1..267
                     /product="enoyl-CoA hydratase-related protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=28128
     Region          6..259
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     Site            order(32,34,66,70..74,110,112..114,136..137,140)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(72,114)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(94,102,123..126,138..141,148..150,152..153,158..159,
                     161..162,164..165,168,179,182,197,200..201)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
ORIGIN      
        1 mndhtmsits dlvrltaesg vatitldsph nrnalsaqlr velsqhiesa lrddtirvlv
       61 lthtgpafca gadlrearng dtsqsgrelv glleslmtsn kpvvarltgp aragglglvt
      121 acdfaiaadt vtfaftevrl gvipsiisvp lrlrvlphal hrlfltgaaf sanyaaeigl
      181 istvttaddl draiddltga lqlgspgala gvktllnppg sqlhdefrem lnltarffss
      241 aeaqegiraf tekrqpvwvp gptgaat
//
LOCUS       WP_235214885             390 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Rhodococcus opacus].
ACCESSION   WP_235214885
VERSION     WP_235214885.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus opacus
  ORGANISM  Rhodococcus opacus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 390)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 390)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02770.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Rhodococcus opacus"
                     /db_xref="taxon:37919"
     Protein         1..390
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=42942
     Region          22..385
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(108,138,140,171,173,367..369,371,373)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mmnslaisaa aeanpsstid qlrsdfrqwl tdnadelerf rslptdmegi fatlsamqrv
       61 mydagwirlg wsanveglgg ppalravvse elaeagyppp fsfavqevlg paieryapae
      121 lsaevlprll rgeeawcqgf sepgsgsdlg slrtkaidag dhwivngeki wtswaqnadr
      181 cvllvrtgtp dsahrgital fvdmdtpgie ispltaitge qdfsslffkd vkvpktrtlg
      241 evgggwefsm fvlscergaa awqrqawmrw rlrrlvadap hiadarvgea felisalrll
      301 srrtlrslsn getvgvlpsf dkylmstaek flfdsalaai pervlaasdr eaddwrhdyl
      361 ysrassiygg akeiqrniia erilglprek
//
LOCUS       WP_235214910             286 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3560 domain-containing protein [Rhodococcus opacus].
ACCESSION   WP_235214910
VERSION     WP_235214910.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus opacus
  ORGANISM  Rhodococcus opacus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023505.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12083.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Rhodococcus opacus"
                     /db_xref="taxon:37919"
     Protein         1..286
                     /product="DUF3560 domain-containing protein"
                     /calculated_mol_wt=31579
     Region          87..210
                     /region_name="DUF3560"
                     /note="Domain of unknown function (DUF3560); pfam12083"
                     /db_xref="CDD:432317"
ORIGIN      
        1 mvtishsaad gtlmegtsrg dgtnealkal gwrwfrslgt wgirgsrdra pklhliesta
       61 aalraagfev rieidatarp taeveadrie rqagrvaale dkaqrradqa dqaweadrra
      121 hdalpeggep ihvghhserr hrraietahr tlgqavaaee eakaarrrav saavttsary
      181 npetvknrid slqasqradq rlldghertl fvvrgvkqve ktarrsrvlt gnrlllgwrn
      241 aqirsrigre farsrshrgk qrttgpmtsr rvirfsvaas gtgsfv
//
LOCUS       WP_235214967             368 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-binding dehydrogenase [Rhodococcus opacus].
ACCESSION   WP_235214967
VERSION     WP_235214967.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus opacus
  ORGANISM  Rhodococcus opacus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00107.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Rhodococcus opacus"
                     /db_xref="taxon:37919"
     Protein         1..368
                     /product="zinc-binding dehydrogenase"
                     /calculated_mol_wt=38308
     Region          25..367
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
     Site            order(64..66,70,175,179,199..202,204..205,223..224,228,
                     243,267..268,290..291,315..317)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176178"
ORIGIN      
        1 mtssqptlra prenwhpaap aagtmtavtf refggpqvlq aesvptpait pnevlvrvca
       61 vsvgrlldlv arsgrhpyak ftfphilgae hagtvaavgs nvdavsvgdr vatfpvvtdp
      121 acpmvqagyd elsptleiig thrqgayaqf vavpatnvfp vpadmspvda vavalagava
      181 mnqltragfe egqrvivqga asalgsttal larhlggevi vssrdsskre rlrqlgfdsv
      241 ldsaaesfvg dartafggrg anividnlgd pvlwskgmdt lapggamvss gaflghqvgv
      301 nlqrlysqgq riigvrtgnh aaavrlwdev gkgfrsvidr tfpltsaaea hryvesssnv
      361 grvallvd
//
LOCUS       WP_235215068             294 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF4747 family protein [Burkholderia].
ACCESSION   WP_235215068
VERSION     WP_235215068.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027261.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15931.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         1..294
                     /product="DUF4747 family protein"
                     /calculated_mol_wt=33057
     Region          10..263
                     /region_name="DUF4747"
                     /note="Domain of unknown function (DUF4747); pfam15931"
                     /db_xref="CDD:435026"
ORIGIN      
        1 mrtvivgaln ivmpdphneg ryvdmlraay rskrvvkirg qfagilgtfg rrigsdfyyg
       61 eifkfynlkl tgkwlnvneq apaeeedlqe lnvpehlkpg leafpfllhs pthtlfflsq
      121 esdehlgpvd aaryfrelln qprlaekygk ikitvvpded alkkilslpd lrrlhieisp
      181 pnpddlnkle kkikerlknq nakkvvtvlv aekgeslepd eetrllseva aingyvegrg
      241 atesgkvqtf stkehpmrap svydpdvetv etallgaaek ylarllgrrg tnrg
//
LOCUS       WP_235215058             768 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing
            protein [Burkholderia sp. MSh2].
ACCESSION   WP_235215058
VERSION     WP_235215058.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. MSh2
  ORGANISM  Burkholderia sp. MSh2
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (residues 1 to 768)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02737.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Burkholderia sp. MSh2"
                     /db_xref="taxon:1506588"
     Protein         1..768
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /GO_function="GO:0070403 - NAD+ binding [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=81406
     Region          52..767
                     /region_name="fadB"
                     /note="fatty acid oxidation complex subunit alpha FadB;
                     PRK11730"
                     /db_xref="CDD:183293"
ORIGIN      
        1 mafgtrsvtg grsverpslf vscdsslptm ssgmcfpklv risrsgrlee dllfqgenig
       61 vlslddglve lrfdrhdaai nkldartide frqataciaa msavrgvlvt sakdvfivga
      121 ditefsamfr qsagaiatav rtndahvttf enlpvpsvva ingyalgggl elallgafrv
      181 masnarvglp evslglipgl ggtarlsrva glaaaidwva tgqsfdghaa vaagvvdevv
      241 apdmlretal vrlrraaage idwraaqrrk kvrlpisaqe avdvvdrars tlgalhdrnr
      301 paaaiaadtm araavcdlde aldqeadafg rvartqaaas lvqvflneqv lkkqarriar
      361 aarpvsrvav igagtmgggi acasalrgia trmkditqar ldggmdsark hieqqvqggr
      421 ldlrqadacy asitpqlddt gladvdfaie avveqrdvkr gvlaeleqrv padavlasnt
      481 sslridelas altrpeqlvg mhffnpvstt rlveiirgsr tgdaavataa gyavalgktp
      541 ivvrdctgfv vnrvltpyvn aflrlleega dfeavdsame afgwpmgpay wldaigmdvl
      601 drvvevvgag yrdrmppveg saigrlverq rygrksgegf yryeaagtgr psrhaspdah
      661 alvaalqfdg patfsdhaiv ermmlpmive aahvldervv asaaeldmal vlglgfpaha
      721 ggalkyadwl gldrvvamcd shadlgapyv ptesmramav agayyypa
//
LOCUS       WP_235215090              24 aa            linear   BCT 02-MAR-2025
DEFINITION  2OG-Fe(II) oxygenase [Burkholderia sp. MSh2].
ACCESSION   WP_235215090
VERSION     WP_235215090.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. MSh2
  ORGANISM  Burkholderia sp. MSh2
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (residues 1 to 24)
  AUTHORS   Mello,L.V. and Rigden,D.J.
  TITLE     A new family of bacterial DNA repair proteins annotated by the
            integration of non-homology, distant homology and structural
            bioinformatic methods
  JOURNAL   FEBS Lett 586 (21), 3908-3913 (2012)
   PUBMED   23022560
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09859.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..24
                     /organism="Burkholderia sp. MSh2"
                     /db_xref="taxon:1506588"
     Protein         1..24
                     /product="2OG-Fe(II) oxygenase"
                     /calculated_mol_wt=2722
     Region          <1..24
                     /region_name="COG3826"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:443038"
ORIGIN      
        1 mrhgvdvirr gkrhplglif hdsr
//
LOCUS       WP_235215106             316 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MBL fold metallo-hydrolase [Burkholderia].
ACCESSION   WP_235215106
VERSION     WP_235215106.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
REFERENCE   1  (residues 1 to 316)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 316)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         1..316
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=34805
     Region          1..234
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(55,57,59..60,159..160,178,224)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 mpfrldhinv waidtsdgwv lvdtglnapd tmadwlalma qgplsrplqg vyathmhpdh
       61 aglagwltrr agvplhmsrl eylscrvlha dtnreappdg vrfcrragws eaavegyrsg
      121 fgsfgkhiha lpdsyrrlqd ghtvrlggrd wriittgghs pehvslycpd lkllisgdqa
      181 lpkissnvsv fasepeanpl qewyaslgkl mrgvpddvlv lpshnepfyg lherlhales
      241 aqdraldrlr qsmaagplri vdafvplfgr pigeqdvqql slatgeavac mnhliatrvv
      301 kcelddgdva wyslet
//
LOCUS       WP_235215168             133 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: flagellar basal body protein [Burkholderia].
ACCESSION   WP_235215168
VERSION     WP_235215168.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012674.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00460.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         1..133
                     /product="flagellar basal body protein"
                     /GO_process="GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /calculated_mol_wt=13981
     Region          18..121
                     /region_name="FlgB"
                     /note="flagellar basal-body rod protein FlgB; TIGR01396"
                     /db_xref="CDD:273598"
ORIGIN      
        1 mndqqenavt egmeaitsat lglaldaasl rqqaiaania naqtdgyvpl gvdferqltd
       61 arqkwassgs vdaeslrgva prlvrvvsqd gmqsgldmqv aalaqngvhf qtllkalskh
      121 yalleeavsd gkk
//
LOCUS       WP_235215252             760 aa            linear   BCT 02-MAR-2025
DEFINITION  ricin-type beta-trefoil lectin domain protein [Phaeacidiphilus
            oryzae].
ACCESSION   WP_235215252
VERSION     WP_235215252.1
KEYWORDS    RefSeq.
SOURCE      Phaeacidiphilus oryzae
  ORGANISM  Phaeacidiphilus oryzae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Phaeacidiphilus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012859.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00652.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Phaeacidiphilus oryzae"
                     /db_xref="taxon:348818"
     Protein         1..760
                     /product="ricin-type beta-trefoil lectin domain protein"
                     /calculated_mol_wt=78053
     Region          75..197
                     /region_name="beta-trefoil_Ricin_laminarinase"
                     /note="ricin B-type lectin domain, beta-trefoil fold,
                     found in glucan endo-1,3-beta-glucosidase and similar
                     proteins; cd23451"
                     /db_xref="CDD:467329"
     Site            order(88..91,101,103,106,110..111)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467329"
     Site            order(129..132,142,144,147,151..152)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467329"
     Site            order(172..175,184,186,189,193..194)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467329"
     Region          208..759
                     /region_name="GH55_SacteLam55A-like"
                     /note="bacterial glycoside hydrolase family 55 (GH55)
                     family domains and similar proteins; cd23669"
                     /db_xref="CDD:467841"
ORIGIN      
        1 msgrigargg vrigaragar agsragarar laavlavaal llaafnaltp qhaqaaarpa
       61 atpnakpgtt pnatpagaiv gyqglclddr sastadgnpv qvytcngtaa qqwtvasdgt
      121 lrtlgkcldv agagtadgta vdlytcngtv aqvwqprsdg elvnpdsgkc lddtgyggsg
      181 tqaqiwscag tanqtwtlpt atapgntpal gpnvyvfdts mstttiqndi davyatqesn
      241 qfgnqryelm fepgtydvsv pvgfytevvg lgqnpsqtvi tgggihadaa wsngnatqnf
      301 wrgvenitid pssgstewav sqaspmrrvn idgnlvlddd tsgnttsnws sggflgdsvv
      361 tgqvdsgtqq qflyrndrfg gytgsnwnmv fvgtggapaq sfpsppdttv gqtptvdekp
      421 ypyvdgsgnw nvfvpgtrtg sqgvswangd tpgtslpigd fyiatpgdta dqlnsalaag
      481 kdllftpgvy qidgtldatd pdtvvlglgl atlvsdngdt vlktadvngv riggllfdag
      541 ttnspvlvei gpngssasha gdptvlsdvf ariggatvgr atetlevnss dvigddlwlw
      601 radhgnsgtv gwntntaang lvvngarvtm yglavehyqa vqtqwngdgg adyfyqsemp
      661 ydppdqaswm dgssdgypsi alagsvtgfq gyglgvycyf sansgvaaan aftsptvsgv
      721 qwhdmvtvsl ggvgtidhvi dgtgptvrsg stvgyltsyn
//
LOCUS       WP_235215302             246 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidase dimerization domain-containing protein [Phaeacidiphilus
            oryzae].
ACCESSION   WP_235215302
VERSION     WP_235215302.1
KEYWORDS    RefSeq.
SOURCE      Phaeacidiphilus oryzae
  ORGANISM  Phaeacidiphilus oryzae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Phaeacidiphilus.
REFERENCE   1  (residues 1 to 246)
  AUTHORS   Rowsell,S., Pauptit,R.A., Tucker,A.D., Melton,R.G., Blow,D.M. and
            Brick,P.
  TITLE     Crystal structure of carboxypeptidase G2, a bacterial enzyme with
            applications in cancer therapy
  JOURNAL   Structure 5 (3), 337-347 (1997)
   PUBMED   9083113
REFERENCE   2  (residues 1 to 246)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07687.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Phaeacidiphilus oryzae"
                     /db_xref="taxon:348818"
     Protein         1..246
                     /product="peptidase dimerization domain-containing
                     protein"
                     /calculated_mol_wt=25957
     Region          <1..235
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mldrgaftga dlammvhpap vdvaearpfa vshsrisytg rsahaaaype agvnaadaft
       61 vaqvaigllr qqlppttrvh givthagdap naiperaegr wyvraetlae lerleprvlr
      121 afeagalatg celdvepesk pyaefradet aladyranav algrrfapae taarmnrast
      181 dmgnvsqvvp aihpyigigs lpatnhqref aafcvgqaar ralldgaval awtavdraar
      241 gpsakp
//
LOCUS       WP_235215322             328 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-dependent oxidoreductase [Phaeacidiphilus oryzae].
ACCESSION   WP_235215322
VERSION     WP_235215322.1
KEYWORDS    RefSeq.
SOURCE      Phaeacidiphilus oryzae
  ORGANISM  Phaeacidiphilus oryzae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Phaeacidiphilus.
REFERENCE   1  (residues 1 to 328)
  AUTHORS   Dengler,U., Niefind,K., Kiess,M. and Schomburg,D.
  TITLE     Crystal structure of a ternary complex of D-2-hydroxyisocaproate
            dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate
            at 1.9 A resolution
  JOURNAL   J Mol Biol 267 (3), 640-660 (1997)
   PUBMED   9126843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02826.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Phaeacidiphilus oryzae"
                     /db_xref="taxon:348818"
     Protein         1..328
                     /product="NAD(P)-dependent oxidoreductase"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
                     /calculated_mol_wt=34350
     Region          19..328
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(154..156,158,176..178,213..214,241)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:240631"
ORIGIN      
        1 mdalaalngm rperltgarv vvgpelseel caglagalag dgvpvsrwdp adggdgplvy
       61 vggrpaaelr gdprlvwfhs asagvdaals ggwpegvllt rtvgrmaerm aqyvlgwvla
      121 eaqhvpvylr qqadrvwlrr pgelvagrta vvfgagsigs eiggllrrcg vrtvgiarta
      181 rpdrsaegfd rlltldqaaa egvldearwv vgvlpltagt rgyfdrgffd rlgarpsfln
      241 lgrgaavdlp alaaalesdr vrsavldvvp eepagpdalc wrlprtvvts hssgvtdded
      301 virdlvaarr alasgglpal tvdpargy
//
LOCUS       WP_235215358              55 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Phaeacidiphilus oryzae].
ACCESSION   WP_235215358
VERSION     WP_235215358.1
KEYWORDS    RefSeq.
SOURCE      Phaeacidiphilus oryzae
  ORGANISM  Phaeacidiphilus oryzae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Phaeacidiphilus.
REFERENCE   1  (residues 1 to 55)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 55)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012234.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00004.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..55
                     /organism="Phaeacidiphilus oryzae"
                     /db_xref="taxon:348818"
     Protein         1..55
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=5743
     Region          <1..>41
                     /region_name="SpoVK"
                     /note="AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell
                     wall/membrane/envelope biogenesis, Cell cycle control,
                     cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG0464"
                     /db_xref="CDD:440232"
ORIGIN      
        1 mlevtcaeld akgvgqsapk vravvheald gvlvidevya lnteavdalv reldh
//
LOCUS       WP_235215400             762 aa            linear   BCT 02-MAR-2025
DEFINITION  glycogen debranching N-terminal domain-containing protein
            [Phaeacidiphilus oryzae].
ACCESSION   WP_235215400
VERSION     WP_235215400.1
KEYWORDS    RefSeq.
SOURCE      Phaeacidiphilus oryzae
  ORGANISM  Phaeacidiphilus oryzae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Phaeacidiphilus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026092.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14742.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Phaeacidiphilus oryzae"
                     /db_xref="taxon:348818"
     Protein         1..762
                     /product="glycogen debranching N-terminal
                     domain-containing protein"
                     /calculated_mol_wt=78368
     Region          105..289
                     /region_name="GDE_N_bis"
                     /note="N-terminal domain of (some) glycogen debranching
                     enzymes; pfam14742"
                     /db_xref="CDD:434175"
     Region          327..687
                     /region_name="GDB1"
                     /note="Glycogen debranching enzyme (alpha-1,6-glucosidase)
                     [Carbohydrate transport and metabolism]; COG3408"
                     /db_xref="CDD:442634"
ORIGIN      
        1 mtialrepre plepreprep rapgqpgqpg qpgqppesrg srgprgpqpg pwpgpaqrrp
       61 yglpgaspaa gppgarpgav pgrgtapgsg rrghppaahs avicveapal avsgpdgqlr
      121 gfgwdgfyrd gvralarlev rlgglepipl hgsptsagaa rflgavrvpg dpdpdpgvtv
      181 erlrqaagre ritvhnagvr parfafevcl gsdlaplaev gtgerrpdlp grvhaaglrw
      241 saaapmppgl ptaaavtavp sphavlasag ilrwelelqp agrwsveltv qtqtapgrag
      301 llprgrgtaa vpwsrlvarc dddrlpalld rsldelrgll lidpdhpadl ypasgapwrf
      361 glipldalqt arallplgta laagtlrala rrraegpeaa egllpgplrq sgpgqppact
      421 ataasllfvt vlaeawrwgl paeqveallp taerflarlr raagdgflpe lrpatagaag
      481 epehrppara vtqalahraa lhgadlldaf grpgggewrg waealrerfr adfwiddlsg
      541 glpaaalgpd rapvpgpgsa haqlldsgla adgallpgll asdqarvlar rlaapdldcg
      601 wglrtltaks pwfsplghrs gavrvdetal avsglaeigl ereagallgg lldaarhfgg
      661 tlpemyageq rapvargpvp hpaacrpgav asaavvqvaa alagvrpdvp ggrvvvrpvs
      721 saplgelela glrvaggpfs vrisrigvav veeapaglql gv
//
LOCUS       WP_235215161             363 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: type VI immunity family protein [Burkholderia].
ACCESSION   WP_235215161
VERSION     WP_235215161.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
REFERENCE   1  (residues 1 to 363)
  AUTHORS   Hespanhol,J.T., Sanchez-Limache,D.E., Nicastro,G.G., Mead,L.,
            Llontop,E.E., Chagas-Santos,G., Farah,C.S., de Souza,R.F.,
            Galhardo,R.D.S., Lovering,A.L. and Bayer-Santos,E.
  TITLE     Antibacterial T6SS effectors with a VRR-Nuc domain are
            structure-specific nucleases
  JOURNAL   Elife 11, e82437 (2022)
   PUBMED   36226828
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 363)
  AUTHORS   Wang,S., Geng,Z., Zhang,H., She,Z. and Dong,Y.
  TITLE     The Pseudomonas aeruginosa PAAR2 cluster encodes a putative VRR-NUC
            domain-containing effector
  JOURNAL   FEBS J 288 (19), 5755-5767 (2021)
   PUBMED   33838074
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023304.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11876.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         1..363
                     /product="type VI immunity family protein"
                     /calculated_mol_wt=39694
     Region          121..333
                     /region_name="DUF3396"
                     /note="Protein of unknown function (DUF3396); pfam11876"
                     /db_xref="CDD:463379"
ORIGIN      
        1 mimdeqalie waknaqtdal lkggmllpkq rhdyigaamv vraalffpna yqeavqgeia
       61 ncfaayaaya gprlrwltqd grkpvqlkdg qvdqkafrar gdagvtayls sgekaddagl
      121 wefrvfgile yeeampeaga saltfsvpap flvahprvfq qlfvdfakrl nayngyagfa
      181 vnlslteaea ntpteywlar ryialdvgnp llnathlrtk lktvswltcl dkalleqvgg
      241 italrselpp dwfalydmng gvviqagpep esggaadeag kgppvapany vilnnalkaa
      301 rattvwrlqr glmgaaapyf dttaesddwl hrfdidesdv fdykakllkm prltatsvlp
      361 drl
//
LOCUS       WP_235215416             261 aa            linear   BCT 02-MAR-2025
DEFINITION  enhanced serine sensitivity protein SseB C-terminal
            domain-containing protein [Phaeacidiphilus oryzae].
ACCESSION   WP_235215416
VERSION     WP_235215416.1
KEYWORDS    RefSeq.
SOURCE      Phaeacidiphilus oryzae
  ORGANISM  Phaeacidiphilus oryzae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Phaeacidiphilus.
REFERENCE   1  (residues 1 to 261)
  AUTHORS   Ruiz-Albert,J., Mundy,R., Yu,X.J., Beuzon,C.R. and Holden,D.W.
  TITLE     SseA is a chaperone for the SseB and SseD translocon components of
            the Salmonella pathogenicity-island-2-encoded type III secretion
            system
  JOURNAL   Microbiology (Reading) 149 (Pt 5), 1103-1111 (2003)
   PUBMED   12724372
REFERENCE   2  (residues 1 to 261)
  AUTHORS   Hama,H., Kayahara,T., Ogawa,W., Tsuda,M. and Tsuchiya,T.
  TITLE     Enhancement of serine-sensitivity by a gene encoding rhodanese-like
            protein in Escherichia coli
  JOURNAL   J Biochem 115 (6), 1135-1140 (1994)
   PUBMED   7982894
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025932.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14581.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Phaeacidiphilus oryzae"
                     /db_xref="taxon:348818"
     Protein         1..261
                     /product="enhanced serine sensitivity protein SseB
                     C-terminal domain-containing protein"
                     /calculated_mol_wt=27150
     Region          156..261
                     /region_name="SseB_C"
                     /note="SseB protein C-terminal domain; pfam14581"
                     /db_xref="CDD:434051"
ORIGIN      
        1 magglaagdr fpdvasderp gppraaadlg aavdalrsap pgrprleaye tllravadgt
       61 lyallwhgep gspdaqygsm evagygyvpt vsspaqlaas gwqraheacg grelaavlyp
      121 srwglwldph aagggvgvpw adlrrvalgl drlpagplei sepavaaepf yealkrgara
      181 vpglralrra wvapalgepy laiglelddp hasaddaram vrralaeaap adcrvavlaa
      241 pdeddsvalw maagpapfyr r
//
LOCUS       WP_235215438             423 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Phaeacidiphilus oryzae].
ACCESSION   WP_235215438
VERSION     WP_235215438.1
KEYWORDS    RefSeq.
SOURCE      Phaeacidiphilus oryzae
  ORGANISM  Phaeacidiphilus oryzae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Phaeacidiphilus.
REFERENCE   1  (residues 1 to 423)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 423)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 423)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 423)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Phaeacidiphilus oryzae"
                     /db_xref="taxon:348818"
     Protein         1..423
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=45290
     Region          40..415
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mlslsaigvv gvfalsacss gggsgssadg tvtlkfiaad ygdptkgnss qqywdqvaaa
       61 fekqnpkiki qatiinwndi dskvqtmiqn hdypdvlqtg gyanfvpdgl lykadqiasq
      121 stldnfipsf lnngkvggtq ygipfdsstr mmvyntdifk kagitsapkt wddiakdaqi
      181 ikskglastp yalplgkeea qaesylwelg ngggpvdtsg kfalnsaanv qtfqwiksnl
      241 vdkgltypnp gtvdrtagaw adfqagkaam vnahptlvtq lkaakvpfav tpipgktgpl
      301 tgtlgvadwm mgfknnghad qikkwidfly sdantmkfld eynlmpvtqt dyktmstdak
      361 yadlkpwiaq lpsakfypls nqawdtvsaq ikteigqaat gnpaqvlgdl qkkaqtdeqn
      421 vtg
//
LOCUS       WP_235215450              95 aa            linear   BCT 02-MAR-2025
DEFINITION  putative T7SS-secreted protein [Phaeacidiphilus oryzae].
ACCESSION   WP_235215450
VERSION     WP_235215450.1
KEYWORDS    RefSeq.
SOURCE      Phaeacidiphilus oryzae
  ORGANISM  Phaeacidiphilus oryzae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Phaeacidiphilus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF044554.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21725.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Phaeacidiphilus oryzae"
                     /db_xref="taxon:348818"
     Protein         1..95
                     /product="putative T7SS-secreted protein"
                     /calculated_mol_wt=10137
ORIGIN      
        1 mgqrttgrmg rraevfglad rlralaaele ghagqlrlrt gamrwegeaa nafrrrirrr
       61 vgeallgadg lraaaaaler yarglalpag egiar
//
LOCUS       WP_235215447             483 aa            linear   BCT 02-MAR-2025
DEFINITION  replication initiator [Phaeacidiphilus oryzae].
ACCESSION   WP_235215447
VERSION     WP_235215447.1
KEYWORDS    RefSeq.
SOURCE      Phaeacidiphilus oryzae
  ORGANISM  Phaeacidiphilus oryzae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Phaeacidiphilus.
REFERENCE   1  (residues 1 to 483)
  AUTHORS   Ghinet,M.G., Bordeleau,E., Beaudin,J., Brzezinski,R., Roy,S. and
            Burrus,V.
  TITLE     Uncovering the prevalence and diversity of integrating conjugative
            elements in actinobacteria
  JOURNAL   PLoS One 6 (11), e27846 (2011)
   PUBMED   22114709
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042633.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20199.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Phaeacidiphilus oryzae"
                     /db_xref="taxon:348818"
     Protein         1..483
                     /product="replication initiator"
                     /calculated_mol_wt=52659
     Region          45..461
                     /region_name="RepSA"
                     /note="Replication initiator protein, pSAM2; pfam20199"
                     /db_xref="CDD:466350"
ORIGIN      
        1 mtahcahpnp ydspaarraf ldlddrlkal deedrdlyri ahmpgrdrwi qqiqatggca
       61 hpiylagqst tydtatglvl rhyttaeepg grlavrcrnr resrcapcsr eyqgdtfhli
      121 ragllggknv pesvkarprl fvtltapgfg tvhqagdchp drggrcphgq rrachrthhd
      181 gdaligqplc arcydytghv lwnahapalw kaftdnlyhh faaatgtgrt kirrqvrisa
      241 akvaeyqarg avhfhavlrl dgpdgpatep ppwasaella rcvptaaaav alalppsdav
      301 gdlvlrfgeq ldvhpidatg lrddqvagyv akyttksvea agaldrritd gdqiprlrtt
      361 ehvraligta wrlgeapefa hlrlrawahm lgfrghcltk traysttlgq lraaraehar
      421 sanspdlylm tddgtdtvst whyvgsghtp gealiaagia edlalmrevi revladerag
      481 vss
//
LOCUS       WP_235215504             481 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein [Phaeacidiphilus oryzae].
ACCESSION   WP_235215504
VERSION     WP_235215504.1
KEYWORDS    RefSeq.
SOURCE      Phaeacidiphilus oryzae
  ORGANISM  Phaeacidiphilus oryzae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Phaeacidiphilus.
REFERENCE   1  (residues 1 to 481)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Phaeacidiphilus oryzae"
                     /db_xref="taxon:348818"
     Protein         1..481
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=51764
     Region          8..479
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     Site            order(159..163,171,186,188..189,236..239,242,245..246,
                     260..262,296,392,394,420,458)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143395"
     Site            order(163,260,293,296)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143395"
ORIGIN      
        1 medalfqyap apedraaage ldssyghfvn gefvepagge alktvdpatg qvlaefaqgd
       61 erdvdravra ariafgrwsg lpgserakyl friarlvqer srelavlesi dngkpiretr
      121 dvdlplvaah ffyyagwadk lafagwgpdp rplgvaaqvi pwnfpllmla wkvapalacg
      181 ntvvlkpaet tpltalrfad icrqaglpeg vvnivtgdgr tgaalvghdg vdkvaftgst
      241 avgreiartl agtgrrltle lggkaanivf ddapidqave gvvqgiyfnq gqvccagsrl
      301 lvqesveeef ltalrrrmel lrvgdpldkn tdvgainsae qlarigelae ageaegarrw
      361 spsgcrlpet gywfaptlft gvsqahriar eeifgpvlsv ltfrtpeeav akanntpygl
      421 sagvwtekgs rmlwmarrlr agvvwsntfn rfdpaspfgg ygesgygreg grhgleayld
      481 v
//
LOCUS       WP_235215522             608 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein
            [Phaeacidiphilus oryzae].
ACCESSION   WP_235215522
VERSION     WP_235215522.1
KEYWORDS    RefSeq.
SOURCE      Phaeacidiphilus oryzae
  ORGANISM  Phaeacidiphilus oryzae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Phaeacidiphilus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Phaeacidiphilus oryzae"
                     /db_xref="taxon:348818"
     Protein         1..608
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=61183
     Region          17..603
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
ORIGIN      
        1 mpgsragrgp rgspagrlll svvrasrirl aalallgmvs tgsalalpaa lgkaldlvvr
       61 ahaggaegag gaaggsarlw llacaaltaa siaaeagsgy lsgatdarnt arlrrlifrh
      121 iafcgprltd rigpgdlvgr ftaatadtag aatglagala alalplgglv algllspwll
      181 laflagvpal vlllrsftra ttacvgdylr aqgsiaarlv ealagartia aagtedrers
      241 rilgplpelg vhghrmwavq graagqaaav vpvlqvlvla cgglllsagr lsvgellaaa
      301 ryatlaagig slsgsasvla rgraaaarla gapgrpgvte vpatawgteg lpdgkgeltf
      361 rgvsagdgll kdvdldfpag attavvgpsg sgksllaala grlaepesge vlldgvplta
      421 lrreelrtav gyafarpall getladtial glrgpaaaea vpedvpegvp eavreaaraa
      481 sadafvsrlp rgyrtpcaea plsggeaqrl glarafaqar rgrllildda tssldtatel
      541 evtralrerl ptptrlvvah raataaradq vvwlagreag ggiravgphr alwqdpdyrs
      601 lfrppqas
//
LOCUS       WP_235215320             149 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6343 family protein [Phaeacidiphilus oryzae].
ACCESSION   WP_235215320
VERSION     WP_235215320.1
KEYWORDS    RefSeq.
SOURCE      Phaeacidiphilus oryzae
  ORGANISM  Phaeacidiphilus oryzae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Phaeacidiphilus.
REFERENCE   1  (residues 1 to 149)
  AUTHORS   Larson,C.B., Crusemann,M. and Moore,B.S.
  TITLE     PCR-Independent Method of Transformation-Associated Recombination
            Reveals the Cosmomycin Biosynthetic Gene Cluster in an Ocean
            Streptomycete
  JOURNAL   J Nat Prod 80 (4), 1200-1204 (2017)
   PUBMED   28333450
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039414.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19870.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Phaeacidiphilus oryzae"
                     /db_xref="taxon:348818"
     Protein         1..149
                     /product="DUF6343 family protein"
                     /calculated_mol_wt=15946
     Region          69..148
                     /region_name="DUF6343"
                     /note="Family of unknown function (DUF6343); pfam19870"
                     /db_xref="CDD:466216"
ORIGIN      
        1 mrhqpdhktq aeherpdtdv gggnygagkv wgeetplrtd ahgrplegpn arprapepav
       61 ktditgrrrr tgseprtars dldlrvflss vfaplfligt gvfaylaara gahasppqgl
      121 wiglaaacav ltlaaaadiv lvqrrrrrs
//
LOCUS       WP_235215559             258 aa            linear   BCT 02-MAR-2025
DEFINITION  phospholipase domain-containing protein [Phaeacidiphilus oryzae].
ACCESSION   WP_235215559
VERSION     WP_235215559.1
KEYWORDS    RefSeq.
SOURCE      Phaeacidiphilus oryzae
  ORGANISM  Phaeacidiphilus oryzae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Phaeacidiphilus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017330.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05506.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Phaeacidiphilus oryzae"
                     /db_xref="taxon:348818"
     Protein         1..258
                     /product="phospholipase domain-containing protein"
                     /GO_function="GO:0004629 - phospholipase C activity
                     [Evidence IEA]"
                     /GO_process="GO:0016042 - lipid catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=27029
     Region          <2..256
                     /region_name="PC_PLC"
                     /note="phospholipase C, phosphocholine-specific,
                     Pseudomonas-type; TIGR03396"
                     /db_xref="CDD:274561"
ORIGIN      
        1 mlrfletwtg vaephisawr revcgdltaa falsqtptaf ptglpdtarl vseadaeksl
       61 paatapasss tppqetgsrp aiplgyrfdt tswtdpatgr lwfktvnsgs lgggftaytv
      121 nhrayaawpy tcatgssisd yfsaltyggg pydvdlhgpd gylrgfqgdv rtwsdstkgh
      181 peayvtdagd grqltlglan sggaavtftl pdgstrsvaa ggswqgtlsa dsdgrydltv
      241 tadtgdgfar rfagrlyp
//
LOCUS       WP_235215782             514 aa            linear   BCT 02-MAR-2025
DEFINITION  PPE domain-containing protein [Mycobacterium kyorinense].
ACCESSION   WP_235215782
VERSION     WP_235215782.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kyorinense
  ORGANISM  Mycobacterium kyorinense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 514)
  AUTHORS   Strong,M., Sawaya,M.R., Wang,S., Phillips,M., Cascio,D. and
            Eisenberg,D.
  TITLE     Toward the structural genomics of complexes: crystal structure of a
            PE/PPE protein complex from Mycobacterium tuberculosis
  JOURNAL   Proc Natl Acad Sci U S A 103 (21), 8060-8065 (2006)
   PUBMED   16690741
REFERENCE   2  (residues 1 to 514)
  AUTHORS   Cole,S.T., Brosch,R., Parkhill,J., Garnier,T., Churcher,C.,
            Harris,D., Gordon,S.V., Eiglmeier,K., Gas,S., Barry,C.E. 3rd,
            Tekaia,F., Badcock,K., Basham,D., Brown,D., Chillingworth,T.,
            Connor,R., Davies,R., Devlin,K., Feltwell,T., Gentles,S.,
            Hamlin,N., Holroyd,S., Hornsby,T., Jagels,K., Krogh,A., McLean,J.,
            Moule,S., Murphy,L., Oliver,K., Osborne,J., Quail,M.A.,
            Rajandream,M.A., Rogers,J., Rutter,S., Seeger,K., Skelton,J.,
            Squares,R., Squares,S., Sulston,J.E., Taylor,K., Whitehead,S. and
            Barrell,B.G.
  TITLE     Deciphering the biology of Mycobacterium tuberculosis from the
            complete genome sequence
  JOURNAL   Nature 393 (6685), 537-544 (1998)
   PUBMED   9634230
  REMARK    Erratum:[Nature 1998 Nov 12;396(6707):190]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013021.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00823.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Mycobacterium kyorinense"
                     /db_xref="taxon:487514"
     Protein         1..514
                     /product="PPE domain-containing protein"
                     /calculated_mol_wt=50789
ORIGIN      
        1 mrlassytaa anrvaalygv vldanaqsya aqeaasaatl gaggptaaap tpptatlpag
       61 mpaassaapd lpagevpatp rdisrlidsg pgtahmraae aqlrsdatql daaaakiesa
      121 intansgwas asadaatdrm relhtwyrgh aeyvrglade vaghvenfrn attqvprlkt
      181 vddaerelav aqennrrshg mfkpavaaaq vkvgqvyqea vsgfgkytal asassprvpv
      241 pppmppgaaq tmspkssagd stpvehmdrs atgdpvdpvd agagvdetmt sggpvwpagd
      301 vdpagdaplv dplvspaaea vpqvvpavig gvvggvggvl gglagagqra lsgvgqaaap
      361 alsglgqpsg ggepgggepq spempssggd ftpddggsmp gdteassdpg plsaspagav
      421 papaaaapvs apaaatpaag eatgggpamg gammpplmga prggksgsda erklyrerrl
      481 kvvappnsep vkgrrearrv adtertsess rrer
//
LOCUS       WP_235215780             102 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: antitoxin Xre/MbcA/ParS toxin-binding
            domain-containing protein [Mycobacterium].
ACCESSION   WP_235215780
VERSION     WP_235215780.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium
  ORGANISM  Mycobacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae.
REFERENCE   1  (residues 1 to 102)
  AUTHORS   Zhang,S.P., Feng,H.Z., Wang,Q., Kempher,M.L., Quan,S.W., Tao,X.,
            Niu,S., Wang,Y., Feng,H.Y. and He,Y.X.
  TITLE     Bacterial type II toxin-antitoxin systems acting through
            post-translational modifications
  JOURNAL   Comput Struct Biotechnol J 19, 86-93 (2020)
   PUBMED   33384857
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 102)
  AUTHORS   Freire,D.M., Gutierrez,C., Garza-Garcia,A., Grabowska,A.D.,
            Sala,A.J., Ariyachaokun,K., Panikova,T., Beckham,K.S.H., Colom,A.,
            Pogenberg,V., Cianci,M., Tuukkanen,A., Boudehen,Y.M., Peixoto,A.,
            Botella,L., Svergun,D.I., Schnappinger,D., Schneider,T.R.,
            Genevaux,P., de Carvalho,L.P.S., Wilmanns,M., Parret,A.H.A. and
            Neyrolles,O.
  TITLE     An NAD+ Phosphorylase Toxin Triggers Mycobacterium tuberculosis
            Cell Death
  JOURNAL   Mol Cell 73 (6), 1282-1291 (2019)
   PUBMED   30792174
REFERENCE   3  (residues 1 to 102)
  AUTHORS   Piscotta,F.J., Jeffrey,P.D. and Link,A.J.
  TITLE     ParST is a widespread toxin-antitoxin module that targets
            nucleotide metabolism
  JOURNAL   Proc Natl Acad Sci U S A 116 (3), 826-834 (2019)
   PUBMED   30598453
REFERENCE   4  (residues 1 to 102)
  AUTHORS   Skjerning,R.B., Senissar,M., Winther,K.S., Gerdes,K. and
            Brodersen,D.E.
  TITLE     The RES domain toxins of RES-Xre toxin-antitoxin modules induce
            cell stasis by degrading NAD+
  JOURNAL   Mol Microbiol 111 (1), 221-236 (2019)
   PUBMED   30315706
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021255.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09722.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Mycobacterium"
                     /db_xref="taxon:1763"
     Protein         1..102
                     /product="antitoxin Xre/MbcA/ParS toxin-binding
                     domain-containing protein"
                     /calculated_mol_wt=10739
     Region          <4..93
                     /region_name="COG5642"
                     /note="Uncharacterized conserved protein, DUF2384 family
                     [Function unknown]"
                     /db_xref="CDD:444366"
ORIGIN      
        1 mrylaeiiga sqlaafigvs rsqptrwisg eerpgptaap mlidlehvia rarlvwgeva
       61 attwlssana yldgarpidv lqisgpaavl ealdaetwgg ar
//
LOCUS       WP_235215791             610 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase [Mycobacterium kyorinense].
ACCESSION   WP_235215791
VERSION     WP_235215791.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kyorinense
  ORGANISM  Mycobacterium kyorinense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 610)
  AUTHORS   Zheng,M., Ginalski,K., Rychlewski,L. and Grishin,N.V.
  TITLE     Protein domain of unknown function DUF1023 is an alpha/beta
            hydrolase
  JOURNAL   Proteins 59 (1), 1-6 (2005)
   PUBMED   15688435
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018018.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06259.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Mycobacterium kyorinense"
                     /db_xref="taxon:487514"
     Protein         1..610
                     /product="alpha/beta hydrolase"
                     /calculated_mol_wt=64591
     Region          321..504
                     /region_name="Abhydrolase_8"
                     /note="Alpha/beta hydrolase; pfam06259"
                     /db_xref="CDD:283837"
ORIGIN      
        1 msvnsiadvd rwdagclrqv saalgkrgas aaqvkeglsr lpliaswqgs ggdaartsld
       61 klsnhlvaht demqavglai nkaadevqev kdalssvdrd ahawgfnidr atgtvtpsds
      121 ldmdhptnrq rqaelearik kvvadantad adlaraitsa gkdasgpaet rpdvraalsg
      181 plpddpnkfr dlwdkltpqe kdwlyrqnhn ignhdgmpav drdhygrlnl adqlahakaa
      241 aaqadalknq hpdwaagkni phpnepgaif ddrlayeawq rqydaaqnga kylpdlqavd
      301 kaiagkpdrk lmlldtetgk qaraavavgd pdkathvsvs tpglnttvhg aiggmsdeat
      361 rlrdealrql qntpghehdt vsaiawigyd ppqvpgfddl gkslaggwgv shddiaraga
      421 hdlarfyngi qathqggrad ltaighsygs lttglalqep gdhgvsralf ygspgveast
      481 pqqlhlqpgh vftmetpddp iqwtydgpri ahdlapflpq pfstiaegil ggadatgagh
      541 fgpnpatnpn fthlatgatt vpdghggtln legaqghsdy prfpddgglr ttnyniaavl
      601 aglgdkavre
//
LOCUS       WP_235215880             191 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: helix-turn-helix domain-containing protein
            [Mycobacterium].
ACCESSION   WP_235215880
VERSION     WP_235215880.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium
  ORGANISM  Mycobacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024139.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12728.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Mycobacterium"
                     /db_xref="taxon:1763"
     Protein         1..191
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=20650
     Region          13..>54
                     /region_name="HTH_17"
                     /note="Helix-turn-helix domain; pfam12728"
                     /db_xref="CDD:463684"
ORIGIN      
        1 maienrpqpg ravvsareaa rmlrrdvrtv rrmiqagdie ggahlgpkqr rwyvyldqlt
       61 stsgparvlp vggdhagdas ldaelrvlra enddlraqvv aaneaarlmm aahamlleav
      121 dqhrvsavem agaadgyrma aegyqvsaer yrqaatgfqa tserlmsvia qyrdalsqft
      181 tpgnlgsltd e
//
LOCUS       WP_235215922             356 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease [Mycobacterium kyorinense].
ACCESSION   WP_235215922
VERSION     WP_235215922.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kyorinense
  ORGANISM  Mycobacterium kyorinense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 356)
  AUTHORS   Bujnicki,J.M. and Rychlewski,L.
  TITLE     Identification of a PD-(D/E)XK-like domain with a novel
            configuration of the endonuclease active site in the
            methyl-directed restriction enzyme Mrr and its homologs
  JOURNAL   Gene 267 (2), 183-191 (2001)
   PUBMED   11313145
REFERENCE   2  (residues 1 to 356)
  AUTHORS   Waite-Rees,P.A., Keating,C.J., Moran,L.S., Slatko,B.E.,
            Hornstra,L.J. and Benner,J.S.
  TITLE     Characterization and expression of the Escherichia coli Mrr
            restriction system
  JOURNAL   J Bacteriol 173 (16), 5207-5219 (1991)
   PUBMED   1650347
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016362.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04471.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Mycobacterium kyorinense"
                     /db_xref="taxon:487514"
     Protein         1..356
                     /product="restriction endonuclease"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_process="GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /calculated_mol_wt=39519
     Region          11..122
                     /region_name="Mrr_cat"
                     /note="Restriction endonuclease; cl46443"
                     /db_xref="CDD:480783"
ORIGIN      
        1 mpapqpeklp lspmlfqylv glftlkhglg vnyhvtlgde vpdeasgtrr dvdvtvatpd
       61 gevyefagye vkhwkkkldv shvealamkl ndmptvtqra ivcssgyteg aikkaahhgv
      121 dlyvikewtt pieeqfpdla pmkgppsevf rgsqfyltwp ewrieahmdn apqmdlipwd
      181 tplfdadgqp hpayvdfrsf teamlvlstd ilfgtqpmke rigpmweall shgaipmpdn
      241 prwpfghtfg idkqevyira tddalyriea vtlqgqlswe yspmlylame kvptgemfat
      301 alvgvspvpg rmiatiiptq grnltlakva lnpgqlnilk qlqlhlggep pvtsat
//
LOCUS       WP_235215943             262 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Mycobacterium
            kyorinense].
ACCESSION   WP_235215943
VERSION     WP_235215943.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kyorinense
  ORGANISM  Mycobacterium kyorinense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 262)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 262)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Mycobacterium kyorinense"
                     /db_xref="taxon:487514"
     Protein         1..262
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=28036
     Region          49..>232
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(61,63..64,66,86..88,126..128,173..175,188,192,
                     218..221)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(148,175,188,192)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mnsswtgtlp plslqirraa giqrpgtdes rerhvsapte vehvndkimv qttdktvlvt
       61 ggnrgigral veealsrgak hvyvgartpv ahpdnrvtpl tldvtdaaqi rraveevqsl
      121 dvvvnnagva lyddlsdgsa ierhlavnlf gvyamiqafl plltrsggai vnnlsvnala
      181 plplipaysi skaaafnltq slrallagrg vtvhavltgp tdtdmtrgld ierplrnpsh
      241 ersstesrka trtsfrtpcr sl
//
LOCUS       WP_235216043             194 aa            linear   BCT 02-MAR-2025
DEFINITION  nuclear transport factor 2 family protein [Mycobacterium
            kyorinense].
ACCESSION   WP_235216043
VERSION     WP_235216043.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kyorinense
  ORGANISM  Mycobacterium kyorinense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024966.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13577.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Mycobacterium kyorinense"
                     /db_xref="taxon:487514"
     Protein         1..194
                     /product="nuclear transport factor 2 family protein"
                     /calculated_mol_wt=22007
     Region          28..164
                     /region_name="NTF2_like"
                     /note="Nuclear transport factor 2 (NTF2-like) superfamily.
                     This family includes members of the NTF2 family,
                     Delta-5-3-ketosteroid isomerases, Scytalone Dehydratases,
                     and the beta subunit of Ring hydroxylating dioxygenases.
                     This family is a classic example of...; cl09109"
                     /db_xref="CDD:471850"
ORIGIN      
        1 mtltdrnlgr wqmpnlpava ldstvdpadr vsaidfinrv nllfdawdid amveaflpds
       61 vtyhthgvnr greemrrffq emypysvagv sriatnpivd rdgdgvivry hnlliryaae
      121 aagprvirgd vpdgpddlpa iwvysamtdr lrrtdsgwri ferhigkttm ndrlrpilsg
      181 rgymdpylpr aasw
//
LOCUS       WP_235216146             154 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2946 family protein [Ruegeria halocynthiae].
ACCESSION   WP_235216146
VERSION     WP_235216146.1
KEYWORDS    RefSeq.
SOURCE      Ruegeria halocynthiae
  ORGANISM  Ruegeria halocynthiae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Ruegeria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022610.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11162.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Ruegeria halocynthiae"
                     /db_xref="taxon:985054"
     Protein         1..154
                     /product="DUF2946 family protein"
                     /calculated_mol_wt=16249
ORIGIN      
        1 mpalnplhii avralravca fagifllllq llgpalaspg qsmwveicse agavwvqvdl
       61 eeedrdptap cpkcadcalc avtaaaplpg qpeliraefi qtaqsgvril yepyvsawlw
      121 petrgppaap ghkteralra smasiqvigg apws
//
LOCUS       WP_235216157             224 aa            linear   BCT 02-MAR-2025
DEFINITION  Hint domain-containing protein [Ruegeria halocynthiae].
ACCESSION   WP_235216157
VERSION     WP_235216157.1
KEYWORDS    RefSeq.
SOURCE      Ruegeria halocynthiae
  ORGANISM  Ruegeria halocynthiae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Ruegeria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13403.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Ruegeria halocynthiae"
                     /db_xref="taxon:985054"
     Protein         1..224
                     /product="Hint domain-containing protein"
                     /calculated_mol_wt=23794
     Region          8..143
                     /region_name="Hint"
                     /note="Hedgehog/Intein domain, found in Hedgehog proteins
                     as well as proteins which contain inteins and undergo
                     protein splicing (e.g. DnaB, RIR1-2, GyrA and Pol). In
                     protein splicing an intervening polypeptide sequence - the
                     intein - is excised from a protein; cl22434"
                     /db_xref="CDD:451395"
ORIGIN      
        1 mnarrgglvh gtkvatsrgw kpveliragd hvrtlengfk tvsrvssdci svptdeanie
       61 nlpvrlpsnv ayngrpvwlm peqgvalgst rlesdpitlp vsfhvvparv lsglfriksd
      121 tpasyfdvtt lffgddeviy iegglrafcp sgrfgssgga synvadsdaa anwarrigdr
      181 gdisviassl galpapilqd simpirpvlg arrpgrpgrp asmv
//
LOCUS       WP_235215899             284 aa            linear   BCT 02-MAR-2025
DEFINITION  MEDS domain-containing protein [Mycobacterium kyorinense].
ACCESSION   WP_235215899
VERSION     WP_235215899.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kyorinense
  ORGANISM  Mycobacterium kyorinense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 284)
  AUTHORS   Anantharaman,V. and Aravind,L.
  TITLE     MEDS and PocR are novel domains with a predicted role in sensing
            simple hydrocarbon derivatives in prokaryotic signal transduction
            systems
  JOURNAL   Bioinformatics 21 (12), 2805-2811 (2005)
   PUBMED   15814558
REFERENCE   2  (residues 1 to 284)
  AUTHORS   La Roche,S.D. and Leisinger,T.
  TITLE     Identification of dcmR, the regulatory gene governing expression of
            dichloromethane dehalogenase in Methylobacterium sp. strain DM4
  JOURNAL   J Bacteriol 173 (21), 6714-6721 (1991)
   PUBMED   1938878
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025774.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14417.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Mycobacterium kyorinense"
                     /db_xref="taxon:487514"
     Protein         1..284
                     /product="MEDS domain-containing protein"
                     /calculated_mol_wt=31251
     Region          18..177
                     /region_name="MEDS"
                     /note="MEthanogen/methylotroph, DcmR Sensory domain;
                     pfam14417"
                     /db_xref="CDD:433946"
     Region          199..275
                     /region_name="STAS_2"
                     /note="STAS domain; pfam13466"
                     /db_xref="CDD:433231"
ORIGIN      
        1 mrrhavvdsa aglvpfghla wgyhsraell sraaeyiadg lrqnqyiaya adrsrdelra
       61 elaampgvgq yldsgrieaw ptsdyyvycp gtdiidadsa vakyldavkq aiakgysgfr
      121 avsdvtpaar tpeqrdalar leylvdqqma vlpfsalcay didqlggaag eliclhpfvs
      181 nksamfriya dpdaeldfal agevdaasde lfdltlrrvw plqrgntvri gakkleffsh
      241 rqlcaleera reddrkvvlt tnrptiirli evlglthvra daas
//
LOCUS       WP_235216258             152 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6233 domain-containing protein [Streptomyces toyocaensis].
ACCESSION   WP_235216258
VERSION     WP_235216258.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces toyocaensis
  ORGANISM  Streptomyces toyocaensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 152)
  AUTHORS   Su,C., Yan,Y., Guo,X., Luo,J., Liu,C., Zhang,Z., Xiang,W.S. and
            Huang,S.X.
  TITLE     Characterization of the N-methyltransferases involved in the
            biosynthesis of toxoflavin, fervenulin and reumycin from
            Streptomyces hiroshimensis ATCC53615
  JOURNAL   Org Biomol Chem 17 (3), 477-481 (2019)
   PUBMED   30565634
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039695.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19746.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Streptomyces toyocaensis"
                     /db_xref="taxon:55952"
     Protein         1..152
                     /product="DUF6233 domain-containing protein"
                     /calculated_mol_wt=16837
     Region          53..109
                     /region_name="DUF6233"
                     /note="Family of unknown function (DUF6233); pfam19746"
                     /db_xref="CDD:466171"
ORIGIN      
        1 mfddlppdld rlhtlrvwht lwlqridaki aaltrrqaeq ergrrnrpap pdwivelgig
       61 dqrpplqvha gdchmagrrr rsvdreearr llaaglkacg hcrpdsllgi tdlsgrpala
      121 aaavpliehw nrpvatvhgq vgpgvqhngv rp
//
LOCUS       WP_235216395              63 aa            linear   BCT 02-MAR-2025
DEFINITION  TetR family transcriptional regulator C-terminal domain-containing
            protein [Streptomyces toyocaensis].
ACCESSION   WP_235216395
VERSION     WP_235216395.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces toyocaensis
  ORGANISM  Streptomyces toyocaensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 63)
  AUTHORS   Sullivan,M.J., Curson,A.R., Shearer,N., Todd,J.D., Green,R.T. and
            Johnston,A.W.
  TITLE     Unusual regulation of a leaderless operon involved in the
            catabolism of dimethylsulfoniopropionate in Rhodobacter sphaeroides
  JOURNAL   PLoS One 6 (1), e15972 (2011)
   PUBMED   21249136
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16925.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..63
                     /organism="Streptomyces toyocaensis"
                     /db_xref="taxon:55952"
     Protein         1..63
                     /product="TetR family transcriptional regulator C-terminal
                     domain-containing protein"
                     /calculated_mol_wt=6342
ORIGIN      
        1 mpgsptgnla lelagrrgea svrtaqvlta wqryfrdava eavlgghvpa gvdpgtaalr
       61 aks
//
LOCUS       WP_235216431             391 aa            linear   BCT 02-MAR-2025
DEFINITION  iron chelate uptake ABC transporter family permease subunit
            [Streptomyces toyocaensis].
ACCESSION   WP_235216431
VERSION     WP_235216431.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces toyocaensis
  ORGANISM  Streptomyces toyocaensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 391)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013219.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01032.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Streptomyces toyocaensis"
                     /db_xref="taxon:55952"
     Protein         1..391
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /calculated_mol_wt=39198
     Region          1..308
                     /region_name="TM_PBP1_branched-chain-AA_like"
                     /note="Transmembrane subunit (TM) of Periplasmic Binding
                     Protein (PBP)-dependent ATP-Binding Cassette (ABC)
                     transporters which are involved in the uptake of
                     branched-chain amino acids (AAs), as well as TMs of
                     transporters involved in the uptake of...; cl00454"
                     /db_xref="CDD:444914"
     Site            order(63,67..69,190..191,193..195,197..198,200..205,
                     207..209,250,259)
                     /site_type="active"
                     /note="ABC-ATPase subunit interface [active]"
                     /db_xref="CDD:119348"
     Site            order(68,70,75,128,130..131,134..135,138..139,142,
                     145..146,148,159..160,164,240,293,296..297,300,303..304,
                     307)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:119348"
     Site            order(148,174,232,236,281,290)
                     /site_type="active"
                     /note="putative PBP binding regions [active]"
                     /db_xref="CDD:119348"
ORIGIN      
        1 maaasvcalt lgtpyvplhr lpaaltagdg tlagivvgel rlprlalall agaclgaagl
       61 vlqealrnpl avpemlgvss gaalgvaapl vlavavpaav qpllaiggaa lggaltllaa
      121 glgrspsavl ltgaavaaal qaallvlmvm adqldlqlvy ryllgslsar twedvtglwp
      181 wllvalpalv lcapvlsvlr lgdadaealg vrarrarsaa lavavvliap vtavcgpvaw
      241 vgflaphlar ralpaadavr wlpwsaawga vvvavadvpa rlalapvetp agawtallgv
      301 pagvalmrsg trapkrprrr prgcsgerpp apgrdpgtgr avpavrdagt pvrrtpepsa
      361 gappgdrdrp ragagapapa hrpeprsees r
//
LOCUS       WP_235216444             255 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Streptomyces toyocaensis].
ACCESSION   WP_235216444
VERSION     WP_235216444.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces toyocaensis
  ORGANISM  Streptomyces toyocaensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13751.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Streptomyces toyocaensis"
                     /db_xref="taxon:55952"
     Protein         1..255
                     /product="transposase"
                     /calculated_mol_wt=28536
     Region          <2..217
                     /region_name="transpos_IS1182"
                     /note="IS1182 family transposase; NF033551"
                     /db_xref="CDD:468080"
ORIGIN      
        1 mitdvtttaa tthdsqvlpg ihtrlprrgl lpaehlvdag ytslphleqa arehqvtvsg
       61 plksnptrqh rryegfardd fhidfdrrqv tcpqgqvsqg whgpyptssp taaplivarf
      121 tksqcqpcpa raqcttsres hrtlgfppre lrdlqlrvra eqqtlewkar yavrsgmegt
      181 vnefahghgm rrcryrgqgk ahvqhvlaai avniervsgl psaveaptpr rstafqnyld
      241 qresprlksw rslss
//
LOCUS       WP_235216462              58 aa            linear   BCT 02-MAR-2025
DEFINITION  cellulose binding domain-containing protein [Streptomyces
            toyocaensis].
ACCESSION   WP_235216462
VERSION     WP_235216462.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces toyocaensis
  ORGANISM  Streptomyces toyocaensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 58)
  AUTHORS   Xu,G.Y., Ong,E., Gilkes,N.R., Kilburn,D.G., Muhandiram,D.R.,
            Harris-Brandts,M., Carver,J.P., Kay,L.E. and Harvey,T.S.
  TITLE     Solution structure of a cellulose-binding domain from Cellulomonas
            fimi by nuclear magnetic resonance spectroscopy
  JOURNAL   Biochemistry 34 (21), 6993-7009 (1995)
   PUBMED   7766609
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012762.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00553.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..58
                     /organism="Streptomyces toyocaensis"
                     /db_xref="taxon:55952"
     Protein         1..58
                     /product="cellulose binding domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_function="GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=5277
     Region          <1..55
                     /region_name="CBM_2"
                     /note="Cellulose binding domain; cl21579"
                     /db_xref="CDD:451319"
ORIGIN      
        1 mwggtparsg aedtvtsasc tasipasgaa tlgftgtrsg apssptafgl ngadcsaa
//
LOCUS       WP_235216463             531 aa            linear   BCT 02-MAR-2025
DEFINITION  sodium:solute symporter family transporter [Streptomyces
            toyocaensis].
ACCESSION   WP_235216463
VERSION     WP_235216463.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces toyocaensis
  ORGANISM  Streptomyces toyocaensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012686.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00474.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Streptomyces toyocaensis"
                     /db_xref="taxon:55952"
     Protein         1..531
                     /product="sodium:solute symporter family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=53904
     Region          23..501
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     Site            order(59,62,348,351..352)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271356"
ORIGIN      
        1 mttlldpssr slvfavfsvf vviclmlciv tgadeddral vrsdsrrlrs wqqgiamggd
       61 tttvatvtvl vgmvatsgfd glgvmlgsli gvvlllvliv eplrahaslt aadlldargs
      121 ggpavrvswg avtllvcfpl lvvqlvvvgn vaaaligqpg artgcivvig cvmtalavsg
      181 girgtgvvmi vksaialpvl lvaavlvlhr fgwdpgrlld aaargsrtge aylrpggytg
      241 egwvgavnri gqtfgmsmat lampavlmra istksprgar tvgrwmlgel tllygalavv
      301 gvgaaalvge alreagpvaq vftplvlgra ldgggilvaa lacvlfltal aavvdvtlaa
      361 gialgrdvlg asgrrpegaa egaaprwsaa ltgavaavva vvaadwnlvv vstlwlavcg
      421 aalapvllya lywpgftarg alwclwgata lsvaalalsp yasgtpesif pghdfrvwdv
      481 tipglvtvpa gfllgwlgsv tdprgaggrr agagapqgtg hrmnrpraah r
//
LOCUS       WP_235215456             122 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6247 family protein [Phaeacidiphilus oryzae].
ACCESSION   WP_235215456
VERSION     WP_235215456.1
KEYWORDS    RefSeq.
SOURCE      Phaeacidiphilus oryzae
  ORGANISM  Phaeacidiphilus oryzae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Phaeacidiphilus.
REFERENCE   1  (residues 1 to 122)
  AUTHORS   Schorn,M., Zettler,J., Noel,J.P., Dorrestein,P.C., Moore,B.S. and
            Kaysser,L.
  TITLE     Genetic basis for the biosynthesis of the pharmaceutically
            important class of epoxyketone proteasome inhibitors
  JOURNAL   ACS Chem Biol 9 (1), 301-309 (2014)
   PUBMED   24168704
REFERENCE   2  (residues 1 to 122)
  AUTHORS   Sugawara,K., Hatori,M., Nishiyama,Y., Tomita,K., Kamei,H.,
            Konishi,M. and Oki,T.
  TITLE     Eponemycin, a new antibiotic active against B16 melanoma. I.
            Production, isolation, structure and biological activity
  JOURNAL   J Antibiot (Tokyo) 43 (1), 8-18 (1990)
   PUBMED   2106503
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039700.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19760.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Phaeacidiphilus oryzae"
                     /db_xref="taxon:348818"
     Protein         1..122
                     /product="DUF6247 family protein"
                     /calculated_mol_wt=13523
     Region          33..107
                     /region_name="DUF6247"
                     /note="Family of unknown function (DUF6247); pfam19760"
                     /db_xref="CDD:437592"
ORIGIN      
        1 mtalsvddgp gplipmppkt paalraavar ldpesisgfd geweraiads rdhydltplr
       61 gfvehwwiwv avaryperla rfrecermas rcddrsgrra fqaetariln gsadeaeaea
      121 rg
//
LOCUS       WP_235216485             625 aa            linear   BCT 02-MAR-2025
DEFINITION  Mu transposase C-terminal domain-containing protein [Streptomyces
            toyocaensis].
ACCESSION   WP_235216485
VERSION     WP_235216485.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces toyocaensis
  ORGANISM  Streptomyces toyocaensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 625)
  AUTHORS   Rice,P. and Mizuuchi,K.
  TITLE     Structure of the bacteriophage Mu transposase core: a common
            structural motif for DNA transposition and retroviral integration
  JOURNAL   Cell 82 (2), 209-220 (1995)
   PUBMED   7628012
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020859.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09299.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Streptomyces toyocaensis"
                     /db_xref="taxon:55952"
     Protein         1..625
                     /product="Mu transposase C-terminal domain-containing
                     protein"
                     /calculated_mol_wt=68936
     Region          <289..334
                     /region_name="rve"
                     /note="Integrase core domain; pfam00665"
                     /db_xref="CDD:459897"
     Region          440..495
                     /region_name="Mu-transpos_C"
                     /note="Mu transposase, C-terminal; pfam09299"
                     /db_xref="CDD:430512"
ORIGIN      
        1 mpplgllesl peavreralv werhvrevet gwpggfgava paraeydpqa rtlaqreeak
       61 aaelsaagmp tsvvtvrrmr acyhregvwg lvdhratrpr aalgraderv vaalrevlea
      121 grerssgtlg rlrvyterll deqygdgvvp lpssatfnrl vhaiadgrgl lgsarqrrwr
      181 sarpappfvp ttvmapgelv mmdstvldaf vvlddgvver peltialdva trticaavlr
      241 akgtrsvdaa qllaqmtvpa pmrpgwaeal amehsvvpye rlmsvdarle gaaarpvitp
      301 qtivvdqgnv fvsssfvaac eslgisvqpt ppgngpakgh vertfssint lfvqhvaayt
      361 gshtgergkd aageavwtlt qlaemfqewi icgwqerehd glrhpmmprr alspnemwat
      421 lvavcgyvpv plgredyiel mpvkrqkind ygiridyrty dhkvlnpyrg erspaadglw
      481 eihynphapg qvwvrlpkfd qprgygweav pwihhslvsa pftdftwqhi krtvarradr
      541 aqhghdlala lrelldtapa wrrssppapa ppqpmvrcgg sctassrrrk pmsrcfrsla
      601 mrcvrlddls cggwrdgsav lsgvr
//
LOCUS       WP_235216424             185 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6000 family protein [Streptomyces toyocaensis].
ACCESSION   WP_235216424
VERSION     WP_235216424.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces toyocaensis
  ORGANISM  Streptomyces toyocaensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 185)
  AUTHORS   Weitnauer,G., Muhlenweg,A., Trefzer,A., Hoffmeister,D.,
            Sussmuth,R.D., Jung,G., Welzel,K., Vente,A., Girreser,U. and
            Bechthold,A.
  TITLE     Biosynthesis of the orthosomycin antibiotic avilamycin A:
            deductions from the molecular analysis of the avi biosynthetic gene
            cluster of Streptomyces viridochromogenes Tu57 and production of
            new antibiotics
  JOURNAL   Chem Biol 8 (6), 569-581 (2001)
   PUBMED   11410376
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040295.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19463.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Streptomyces toyocaensis"
                     /db_xref="taxon:55952"
     Protein         1..185
                     /product="DUF6000 family protein"
                     /calculated_mol_wt=20924
     Region          10..185
                     /region_name="DUF6000"
                     /note="Family of unknown function (DUF6000); pfam19463"
                     /db_xref="CDD:466099"
ORIGIN      
        1 mtslygglpr ylvlnggrfl gprwwhttrf trhliadaaa indeeleall gytwrsrlta
       61 grligvdrre rfrarigdll lasevcysgs accfalarfg thadaeilta yldrylprtd
      121 lhydqpaalg arlgthhadr ftepdglwde wvkgvgrlgy pnhtpaeqrr wtdlhgefan
      181 gwtrp
//
LOCUS       WP_235216511             523 aa            linear   BCT 02-MAR-2025
DEFINITION  FHA domain-containing protein [Archangium violaceum].
ACCESSION   WP_235216511
VERSION     WP_235216511.1
KEYWORDS    RefSeq.
SOURCE      Archangium violaceum
  ORGANISM  Archangium violaceum
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Archangiaceae; Archangium.
REFERENCE   1  (residues 1 to 523)
  AUTHORS   Pallen,M., Chaudhuri,R. and Khan,A.
  TITLE     Bacterial FHA domains: neglected players in the phospho-threonine
            signalling game?
  JOURNAL   Trends Microbiol 10 (12), 556-563 (2002)
   PUBMED   12564991
REFERENCE   2  (residues 1 to 523)
  AUTHORS   Durocher,D., Henckel,J., Fersht,A.R. and Jackson,S.P.
  TITLE     The FHA domain is a modular phosphopeptide recognition motif
  JOURNAL   Mol Cell 4 (3), 387-394 (1999)
   PUBMED   10518219
REFERENCE   3  (residues 1 to 523)
  AUTHORS   Hofmann,K. and Bucher,P.
  TITLE     The FHA domain: a putative nuclear signalling domain found in
            protein kinases and transcription factors
  JOURNAL   Trends Biochem Sci 20 (9), 347-349 (1995)
   PUBMED   7482699
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012708.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00498.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Archangium violaceum"
                     /db_xref="taxon:83451"
     Protein         1..523
                     /product="FHA domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=57408
     Region          5..>227
                     /region_name="COG3456"
                     /note="Predicted component of the type VI protein
                     secretion system, contains a FHA domain [Signal
                     transduction mechanisms, Intracellular trafficking,
                     secretion, and vesicular transport]"
                     /db_xref="CDD:442679"
     Region          8..99
                     /region_name="FHA"
                     /note="Forkhead associated (FHA) domain, binds pSer, pThr,
                     pTyr [Signal transduction mechanisms]; COG1716"
                     /db_xref="CDD:441322"
ORIGIN      
        1 mggralgfql tiakglqagk ellfeqaein igrttendvv lqdagvsrkh vrisdrlgrf
       61 yvqdlgsang tlvndaplsg erelrngdri slgpvefvfk evvsaddatr pfmpvdeddd
      121 atrlirrnqp tsaqpqlqpd pfaptprlep apsgppmlvp vsgpsaarse traeslavep
      181 pttaplsraa pargstptap erpaagadgl saadkarrrr elsetlggql tlwwlglsrg
      241 gkfvlstvvl llvagavggl aivfrpnleg lsrgpepesl glqpvmdsfg vgegvtweqa
      301 dlklfdfefv sptravavlr yqasgiskde vtltvnatpv gsvppdlata sereiqqiis
      361 psllkrnehn qlvfdnvrnp pgrdswrvwn lrleiipvpn lspeellqta rsyvarardf
      421 yerrdvgaen lslawenyrs awitlealde kpelyedvrh mmgqvaldld qkcgqlmlef
      481 qrniqfkdkk rarrvvdeit rrfptpahrc hnlalekane hgl
//
LOCUS       WP_235216521             352 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-ketoacyl synthase N-terminal-like domain-containing protein
            [Archangium violaceum].
ACCESSION   WP_235216521
VERSION     WP_235216521.1
KEYWORDS    RefSeq.
SOURCE      Archangium violaceum
  ORGANISM  Archangium violaceum
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Archangiaceae; Archangium.
REFERENCE   1  (residues 1 to 352)
  AUTHORS   Huang,W., Jia,J., Edwards,P., Dehesh,K., Schneider,G. and
            Lindqvist,Y.
  TITLE     Crystal structure of beta-ketoacyl-acyl carrier protein synthase II
            from E.coli reveals the molecular architecture of condensing
            enzymes
  JOURNAL   EMBO J 17 (5), 1183-1191 (1998)
   PUBMED   9482715
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012337.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00109.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Archangium violaceum"
                     /db_xref="taxon:83451"
     Protein         1..352
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /calculated_mol_wt=37289
     Region          6..341
                     /region_name="PRK06147"
                     /note="3-oxoacyl-(acyl carrier protein) synthase;
                     Validated"
                     /db_xref="CDD:235715"
ORIGIN      
        1 msawpgemav lglglctplg lttrttqvem aagtvrffqt evldrkgepl rasrltllep
       61 dctreermra lattallecv kearvektgs lplvlalpap gsgpavdeep llraltavaa
      121 parllvrpeg lcregragff valaratell lsgqaervlv gavdslcdpg sleyllargr
      181 llcssvregi lpgegagfvl lkrasalrrd gpraqgrila lalaqeprhr lqsepslaeg
      241 ltaafrqlha hpaagsrrva hvlscqtget fwghefnray lrnaalmpep lvahlvaesl
      301 gdlgagagai qlghalhvlg dlnpehgqap ralvygcsde grvgtfiisr et
//
LOCUS       WP_235216539             187 aa            linear   BCT 02-MAR-2025
DEFINITION  carbohydrate-binding protein [Archangium violaceum].
ACCESSION   WP_235216539
VERSION     WP_235216539.1
KEYWORDS    RefSeq.
SOURCE      Archangium violaceum
  ORGANISM  Archangium violaceum
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Archangiaceae; Archangium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015387.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03422.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Archangium violaceum"
                     /db_xref="taxon:83451"
     Protein         1..187
                     /product="carbohydrate-binding protein"
                     /GO_function="GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /calculated_mol_wt=19670
     Region          16..>53
                     /region_name="Crystall"
                     /note="Beta/Gamma crystallin; cl02528"
                     /db_xref="CDD:470604"
     Region          <75..185
                     /region_name="CBM6_cellulase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); appended to
                     glycoside hydrolase (GH) domains, including GH5
                     (cellulase); cd04080"
                     /db_xref="CDD:271146"
     Site            order(79,87..93,147..154,178)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:271146"
     Site            order(96,98,100,130..131,171)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:271146"
ORIGIN      
        1 mrndditsvr vasgykvtvy sddnftgatl tktaddaslv ddnwndvvss levsavgrss
       61 fstlvqaeay samsgvstea ttdtdgglnv gyietadwma yngitfpatg sykleyrvas
      121 psgggklsld lnagatvlgt vdipatggwq nwttvshtvs vtagtynlgi yaqaggwnfn
      181 wfritrl
//
LOCUS       WP_235216547             747 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA-like domain-containing protein, partial [Archangium violaceum].
ACCESSION   WP_235216547
VERSION     WP_235216547.1
KEYWORDS    RefSeq.
SOURCE      Archangium violaceum
  ORGANISM  Archangium violaceum
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Archangiaceae; Archangium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14516.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Archangium violaceum"
                     /db_xref="taxon:83451"
     Protein         1..>747
                     /product="AAA-like domain-containing protein"
     Region          44..>257
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Region          376..>515
                     /region_name="AtpF"
                     /note="FoF1-type ATP synthase, membrane subunit b or b'
                     [Energy production and conversion]; COG0711"
                     /db_xref="CDD:440475"
     Region          <572..747
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          577..612
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          617..653
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          660..694
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          701..738
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
ORIGIN      
        1 msdtrlytvg gtvqagggvy larradpeml elcragtfaf vltarqmgks slmvrtaeql
       61 yeegirsvii dltrigkqvt adqwyvgllv vlqeqlelst dvtdwwalhr dqgpvqrmtr
      121 fleevvltev tqrvvvfvde idttlgmgft ddfyaairyl ynarasnpal erlsfvlvgv
      181 atpgdliqde trtpfnlgqr veltdftlae aaplaeglgh spaegkrvle wvlgwtgghp
      241 yltqrlcqal vdhhaqqara ggsawtrdev wqvvertffa eksfqdnnlv fvrdmltrra
      301 pepervlrty qdirrgrrvp deerslvkah lklsgvvrre gevlrvrnai yervftvawa
      361 gnqlpvdwrv vrfaalalvi tgfvvllpls vmlfkrladt erareevvqq ldsaqelnae
      421 avakmgrvqe eadkllaear rksaraqqea aqaqqeaekl qkdalkarde adrfredaqr
      481 lqaeareaqe kkalaeqeis rartqadekl neaasyvfvn qadarlrgas sslpvstals
      541 meaarvhpsa eamdslirgl iqlrqprarl ehegnvlava fspeagllat asedktarlw
      601 dattgrerav lphasavtav afspdgklva tasdggivrl whtaigtalp itlrhegsvn
      661 avafspdgrs latgsddnta rlwstatrqp lteplphlrr vnavafspdg kflatasadr
      721 vvrlwttsng elqpgslshp qavnava
//
LOCUS       WP_235216540             152 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin dinucleotide binding domain-containing protein
            [Archangium violaceum].
ACCESSION   WP_235216540
VERSION     WP_235216540.1
KEYWORDS    RefSeq.
SOURCE      Archangium violaceum
  ORGANISM  Archangium violaceum
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Archangiaceae; Archangium.
REFERENCE   1  (residues 1 to 152)
  AUTHORS   Hochheimer,A., Hedderich,R. and Thauer,R.K.
  TITLE     The formylmethanofuran dehydrogenase isoenzymes in Methanobacterium
            wolfei and Methanobacterium thermoautotrophicum: induction of the
            molybdenum isoenzyme by molybdate and constitutive synthesis of the
            tungsten isoenzyme
  JOURNAL   Arch Microbiol 170 (5), 389-393 (1998)
   PUBMED   9818358
REFERENCE   2  (residues 1 to 152)
  AUTHORS   Schneider,F., Lowe,J., Huber,R., Schindelin,H., Kisker,C. and
            Knablein,J.
  TITLE     Crystal structure of dimethyl sulfoxide reductase from Rhodobacter
            capsulatus at 1.88 A resolution
  JOURNAL   J Mol Biol 263 (1), 53-69 (1996)
   PUBMED   8890912
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013717.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01568.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Archangium violaceum"
                     /db_xref="taxon:83451"
     Protein         1..152
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /calculated_mol_wt=16539
     Region          17..138
                     /region_name="MopB_CT"
                     /note="Molybdopterin-Binding, C-terminal (MopB_CT) domain
                     of the MopB superfamily of proteins, a large, diverse,
                     heterogeneous superfamily of enzymes that, in general,
                     bind molybdopterin as a cofactor. The MopB domain is found
                     in a wide variety of molybdenum-...; cl09929"
                     /db_xref="CDD:447861"
     Site            order(25..26,28..31,94,111,131..132)
                     /site_type="other"
                     /note="molybdopterin cofactor binding site"
                     /db_xref="CDD:239176"
ORIGIN      
        1 mlgalqslrn epepppglvl lagerrayna nqifrdpswr kidpngamrm hpddarergl
       61 ssgsraices dtgqlevtie lddsvragmv tlphgygmry rggapigpql nrltasehcd
      121 plartpfhkh vpvrvtavhv arseapgest re
//
LOCUS       WP_235216600             720 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Archangium violaceum].
ACCESSION   WP_235216600
VERSION     WP_235216600.1
KEYWORDS    RefSeq.
SOURCE      Archangium violaceum
  ORGANISM  Archangium violaceum
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Archangiaceae; Archangium.
REFERENCE   1  (residues 1 to 720)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 720)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 720)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 720)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Archangium violaceum"
                     /db_xref="taxon:83451"
     Protein         1..720
                     /product="ATP-binding protein"
                     /calculated_mol_wt=80794
     Region          13..>712
                     /region_name="PRK15347"
                     /note="two component system sensor kinase"
                     /db_xref="CDD:237951"
     Region          335..712
                     /region_name="COG4191"
                     /note="Signal transduction histidine kinase regulating
                     C4-dicarboxylate transport system [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443345"
ORIGIN      
        1 mqptsrlrap larstllkmg vriavvitlt tffsylhilh tlrtealahl eqhvteraqs
       61 eqgifllaed nlafikrale eriralgped lgprfdrlfv rmadgsvrsr pegfdgtrtv
      121 gvfvprgvkv dedmrrrlla sydvltsygp afhvrfsdtf vtlpegpivi ywpehptwih
      181 dttpdfmvtq qvyfstslpe nnperrtlws evytdevsgr smststtpld ldgrhaasis
      241 qdvmleelmd htindhlpga ynllfrddgt pivqpptqme gehlrriies vrtrppgvsv
      301 lklpehdeyl avarllgpgw nlvtvlpehv vsqpallaar yvlllgilsl vlelaimawv
      361 lrwqitrpll tftqatdria sgefqveldt srndelgqla hsfqcmvdev rrrekalrea
      421 nesleqrvee rtrelkdvhr qlvqsarrag maeiatnvlh nvgnvlnsvy taaqlarerm
      481 tslrlehvsr vagmlqehqd digaflaqde rgrnvlpflg klgqnlleer keiatllddv
      541 grytehigdi vkvqqnyart prvqepvhle alvedalrin aagltrhqvk vvrqlealpp
      601 vltdkhkamm ilvnlvsnak yamdgvppve riltvkmert ptglvriqvh dngmgiapem
      661 ltrifqygft treeghgfgl hssalaaqel ggsltvhseg pgqgatftle lpyasaqqsa
//
LOCUS       WP_235216406             442 aa            linear   BCT 02-MAR-2025
DEFINITION  ADP-ribosylglycohydrolase family protein [Streptomyces
            toyocaensis].
ACCESSION   WP_235216406
VERSION     WP_235216406.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces toyocaensis
  ORGANISM  Streptomyces toyocaensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 442)
  AUTHORS   Takada,T., Iida,K. and Moss,J.
  TITLE     Cloning and site-directed mutagenesis of human ADP-ribosylarginine
            hydrolase
  JOURNAL   J Biol Chem 268 (24), 17837-17843 (1993)
   PUBMED   8349667
REFERENCE   2  (residues 1 to 442)
  AUTHORS   Piatigorsky,J., Horwitz,J. and Norman,B.L.
  TITLE     J1-crystallins of the cubomedusan jellyfish lens constitute a novel
            family encoded in at least three intronless genes
  JOURNAL   J Biol Chem 268 (16), 11894-11901 (1993)
   PUBMED   8505315
REFERENCE   3  (residues 1 to 442)
  AUTHORS   Fitzmaurice,W.P., Saari,L.L., Lowery,R.G., Ludden,P.W. and
            Roberts,G.P.
  TITLE     Genes coding for the reversible ADP-ribosylation system of
            dinitrogenase reductase from Rhodospirillum rubrum
  JOURNAL   Mol Gen Genet 218 (2), 340-347 (1989)
   PUBMED   2506427
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03747.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Streptomyces toyocaensis"
                     /db_xref="taxon:55952"
     Protein         1..442
                     /product="ADP-ribosylglycohydrolase family protein"
                     /calculated_mol_wt=44808
ORIGIN      
        1 mttqtpspes ppapagrdap lnappepadg vhapqgppap gaetrtggtg gniraegaae
       61 aehpvrrpqa hpqarvegll lglaagdaag wpaarhraar mpewtrrltr eldtfaeqna
      121 tttlpvpial nqpseplrlg psddaewaaf aaeavlragd etafgdlsre rrtraaidlt
      181 wntvagetaa aadrapetes avlplraris vraglgnlat glrppatghd nphyfddaac
      241 vracvlavah pgdpaaaadl aefdarytqd gdgvhgaram aaavalaltg adplacaaaa
      301 caelpedtei grnarhalrl aaeadsafal vpplehqivd hvysygiaaa etvpvalalt
      361 vaargriaea vpaaaclsrv adsapalaga ltgalgggga vpaswreacr tlsgcalprl
      421 tgtdlvelag lleaarpatt gg
//
LOCUS       WP_235216646             485 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-insensitive murein endopeptidase [Archangium violaceum].
ACCESSION   WP_235216646
VERSION     WP_235216646.1
KEYWORDS    RefSeq.
SOURCE      Archangium violaceum
  ORGANISM  Archangium violaceum
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Archangiaceae; Archangium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03411.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Archangium violaceum"
                     /db_xref="taxon:83451"
     Protein         1..485
                     /product="penicillin-insensitive murein endopeptidase"
                     /GO_component="GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA]"
                     /GO_function="GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=52143
     Region          179..>321
                     /region_name="Peptidase_M74"
                     /note="Penicillin-insensitive murein endopeptidase;
                     cl01538"
                     /db_xref="CDD:470243"
     Region          258..391
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
     Region          <325..>474
                     /region_name="PRK13914"
                     /note="invasion associated endopeptidase"
                     /db_xref="CDD:237555"
ORIGIN      
        1 mrstswiill lcagctahvv ptvspskvta seqeastspg qaavqpalas aasreaaatp
       61 gplpeavtqv vehndaalva aeasteseea addeeladtp dadegeasea taangvtpng
      121 plytaelsde qltemwkkdp atlgsisvgf vesgrmvnsv rvppsennew ivvspelawg
      181 tketvdyiat airevraqyp rapplrvnql ssreggylrp hkshqngrdv dlgfyyptae
      241 pvrvrarenh idlelnwall kalaihtdaq milvdkrvqk vlydyalrkg eskewldslf
      301 nagakslvkh arghrdhfhv rffnpraqel grrvapllal qpdkniqmhr vrsgdtvggi
      361 alrygssina ikkanrmrgv flrigqvlav plrgpctrcp vppplvlppr rmppeleqqa
      421 pavatqevps tpaetrpsva aqtestdmat gtqapevpaq qepavqgspa ntsaaimqmg
      481 paasr
//
LOCUS       WP_235216656             239 aa            linear   BCT 02-MAR-2025
DEFINITION  CHAP domain-containing protein [Archangium violaceum].
ACCESSION   WP_235216656
VERSION     WP_235216656.1
KEYWORDS    RefSeq.
SOURCE      Archangium violaceum
  ORGANISM  Archangium violaceum
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Archangiaceae; Archangium.
REFERENCE   1  (residues 1 to 239)
  AUTHORS   Pai,C.H., Wu,H.J., Lin,C.H. and Wang,A.H.
  TITLE     Structure and mechanism of Escherichia coli glutathionylspermidine
            amidase belonging to the family of cysteine; histidine-dependent
            amidohydrolases/peptidases
  JOURNAL   Protein Sci 20 (3), 557-566 (2011)
   PUBMED   21226054
REFERENCE   2  (residues 1 to 239)
  AUTHORS   Nelson,D., Schuch,R., Chahales,P., Zhu,S. and Fischetti,V.A.
  TITLE     PlyC: a multimeric bacteriophage lysin
  JOURNAL   Proc Natl Acad Sci U S A 103 (28), 10765-10770 (2006)
   PUBMED   16818874
REFERENCE   3  (residues 1 to 239)
  AUTHORS   Bateman,A. and Rawlings,N.D.
  TITLE     The CHAP domain: a large family of amidases including GSP amidase
            and peptidoglycan hydrolases
  JOURNAL   Trends Biochem Sci 28 (5), 234-237 (2003)
   PUBMED   12765834
REFERENCE   4  (residues 1 to 239)
  AUTHORS   Rigden,D.J., Jedrzejas,M.J. and Galperin,M.Y.
  TITLE     Amidase domains from bacterial and phage autolysins define a family
            of gamma-D,L-glutamate-specific amidohydrolases
  JOURNAL   Trends Biochem Sci 28 (5), 230-234 (2003)
   PUBMED   12765833
REFERENCE   5  (residues 1 to 239)
  AUTHORS   Bollinger,J.M. Jr., Kwon,D.S., Huisman,G.W., Kolter,R. and
            Walsh,C.T.
  TITLE     Glutathionylspermidine metabolism in Escherichia coli.
            Purification, cloning, overproduction, and characterization of a
            bifunctional glutathionylspermidine synthetase/amidase
  JOURNAL   J Biol Chem 270 (23), 14031-14041 (1995)
   PUBMED   7775463
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017102.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05257.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Archangium violaceum"
                     /db_xref="taxon:83451"
     Protein         1..239
                     /product="CHAP domain-containing protein"
                     /calculated_mol_wt=25497
     Region          16..203
                     /region_name="NlpC"
                     /note="Cell wall-associated hydrolase, NlpC_P60 family
                     [Cell wall/membrane/envelope biogenesis]; COG0791"
                     /db_xref="CDD:440554"
ORIGIN      
        1 mmlrklllpl mlavlgsapa vaaprgpvkp aakskkatas tstpsrtrap tkpvvkatpa
       61 kkkrpaappp kgrrvatrag klvgaslsay rvpddcsglv raayqavgie llshgtlpge
      121 navsaihrra qragalhkra pkpgdivffr etydrnrdgq rndglthvgv iesverdgtv
      181 vfvhrggsgv krarmnlrfp gkreqggrvl ndyirraegg erarfaself sgyasvsrl
//
LOCUS       WP_235216755             102 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase [Archangium violaceum].
ACCESSION   WP_235216755
VERSION     WP_235216755.1
KEYWORDS    RefSeq.
SOURCE      Archangium violaceum
  ORGANISM  Archangium violaceum
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Archangiaceae; Archangium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012371.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00144.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Archangium violaceum"
                     /db_xref="taxon:83451"
     Protein         1..102
                     /product="serine hydrolase"
                     /calculated_mol_wt=11151
     Region          <20..>78
                     /region_name="AmpC"
                     /note="CubicO group peptidase, beta-lactamase class C
                     family [Defense mechanisms]; COG1680"
                     /db_xref="CDD:441286"
ORIGIN      
        1 mssltghevr ssawpsasvl nfepgaefly nntgytllav ivkrvsgkpp rsfaderifr
       61 plgmtdthfh ddhtelvraq rltaadapap rtgkstakvr dr
//
LOCUS       WP_235216759             493 aa            linear   BCT 02-MAR-2025
DEFINITION  CHASE3 domain-containing protein [Archangium violaceum].
ACCESSION   WP_235216759
VERSION     WP_235216759.1
KEYWORDS    RefSeq.
SOURCE      Archangium violaceum
  ORGANISM  Archangium violaceum
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Archangiaceae; Archangium.
REFERENCE   1  (residues 1 to 493)
  AUTHORS   Zhulin,I.B., Nikolskaya,A.N. and Galperin,M.Y.
  TITLE     Common extracellular sensory domains in transmembrane receptors for
            diverse signal transduction pathways in bacteria and archaea
  JOURNAL   J Bacteriol 185 (1), 285-294 (2003)
   PUBMED   12486065
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017077.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05227.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Archangium violaceum"
                     /db_xref="taxon:83451"
     Protein         1..493
                     /product="CHASE3 domain-containing protein"
                     /calculated_mol_wt=53149
     Region          47..171
                     /region_name="HK9-like_sensor"
                     /note="ligand binding sensor domain of Rhodopseudomonas
                     palustris histidine kinase HK9 and similar proteins;
                     cd19410"
                     /db_xref="CDD:438628"
     Site            order(47,50,60..61,64..65,67..68,71..72,146..147,149,152,
                     155)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:438628"
     Region          <215..488
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
ORIGIN      
        1 mmkmvsnltl rlqftaavvm vsvliclfvv qairstrqft gtavavehsh evinglervl
       61 ssaraaetgq rgyvltgdes ylepyreaqd sidaelarvr glladnpvql rqldavkfll
      121 tqklasmrns velrrargfe aalavittge gkalmddlrr vvaemrehel rllqqrdell
      181 krdsasfekl fmwgggvail lvmvaatvvg lslqkkigsa ielvqgssae lqsaasqqat
      241 gareqasstt eisttvkell atsrqiassa qqvarvadet agaarngndt vlhaqeaidt
      301 vrrqvdaivn hmlelgkrsq eiggivdiin dlaeqtnila inatiesaga gehgkrfavv
      361 adeirkladr vggatkdirv lideiraasn ttimatedgs kavqsstkqf tdvagsfrri
      421 telvranldv areielstqq qttaveqvnt ailevaqtar qaesssaqtl qtatrliqls
      481 kqlhaiidar asa
//
LOCUS       WP_235216560             203 aa            linear   BCT 02-MAR-2025
DEFINITION  aspartyl/asparaginyl beta-hydroxylase domain-containing protein
            [Archangium violaceum].
ACCESSION   WP_235216560
VERSION     WP_235216560.1
KEYWORDS    RefSeq.
SOURCE      Archangium violaceum
  ORGANISM  Archangium violaceum
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Archangiaceae; Archangium.
REFERENCE   1  (residues 1 to 203)
  AUTHORS   Jia,S., McGinnis,K., VanDusen,W.J., Burke,C.J., Kuo,A.,
            Griffin,P.R., Sardana,M.K., Elliston,K.O., Stern,A.M. and
            Friedman,P.A.
  TITLE     A fully active catalytic domain of bovine aspartyl (asparaginyl)
            beta-hydroxylase expressed in Escherichia coli: characterization
            and evidence for the identification of an active-site region in
            vertebrate alpha-ketoglutarate-dependent dioxygenases
  JOURNAL   Proc Natl Acad Sci U S A 91 (15), 7227-7231 (1994)
   PUBMED   8041771
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016974.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05118.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Archangium violaceum"
                     /db_xref="taxon:83451"
     Protein         1..203
                     /product="aspartyl/asparaginyl beta-hydroxylase
                     domain-containing protein"
                     /GO_process="GO:0018193 - peptidyl-amino acid modification
                     [Evidence IEA]"
                     /calculated_mol_wt=22603
     Region          <83..183
                     /region_name="Asp_Arg_Hydrox"
                     /note="Aspartyl/Asparaginyl beta-hydroxylase; cl42444"
                     /db_xref="CDD:478204"
ORIGIN      
        1 mmgtmdsrda vpdslrlplr fdarrlredl grlapeewva hfntstyege wsgvalrsvg
       61 gvagrlypdp aasepyadtp vlercpgvre vlsafacrie svrflklaag arirehrdyr
      121 lgyedgevrl hipvvthagv gfflsgqrvl mgegecwyln vnqphrvdnt gevdrihlvl
      181 dcvlddwlra lfaravreaa daa
//
LOCUS       WP_235216847              78 aa            linear   BCT 02-MAR-2025
DEFINITION  CBS domain-containing protein [Archangium violaceum].
ACCESSION   WP_235216847
VERSION     WP_235216847.1
KEYWORDS    RefSeq.
SOURCE      Archangium violaceum
  ORGANISM  Archangium violaceum
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Archangiaceae; Archangium.
REFERENCE   1  (residues 1 to 78)
  AUTHORS   Scott,J.W., Hawley,S.A., Green,K.A., Anis,M., Stewart,G.,
            Scullion,G.A., Norman,D.G. and Hardie,D.G.
  TITLE     CBS domains form energy-sensing modules whose binding of adenosine
            ligands is disrupted by disease mutations
  JOURNAL   J Clin Invest 113 (2), 274-284 (2004)
   PUBMED   14722619
REFERENCE   2  (residues 1 to 78)
  AUTHORS   Kemp,B.E.
  TITLE     Bateman domains and adenosine derivatives form a binding contract
  JOURNAL   J Clin Invest 113 (2), 182-184 (2004)
   PUBMED   14722609
REFERENCE   3  (residues 1 to 78)
  AUTHORS   Janosik,M., Kery,V., Gaustadnes,M., Maclean,K.N. and Kraus,J.P.
  TITLE     Regulation of human cystathionine beta-synthase by
            S-adenosyl-L-methionine: evidence for two catalytically active
            conformations involving an autoinhibitory domain in the C-terminal
            region
  JOURNAL   Biochemistry 40 (35), 10625-10633 (2001)
   PUBMED   11524006
REFERENCE   4  (residues 1 to 78)
  AUTHORS   Zhang,R., Evans,G., Rotella,F.J., Westbrook,E.M., Beno,D.,
            Huberman,E., Joachimiak,A. and Collart,F.R.
  TITLE     Characteristics and crystal structure of bacterial
            inosine-5'-monophosphate dehydrogenase
  JOURNAL   Biochemistry 38 (15), 4691-4700 (1999)
   PUBMED   10200156
REFERENCE   5  (residues 1 to 78)
  AUTHORS   Ponting,C.P.
  TITLE     CBS domains in CIC chloride channels implicated in myotonia and
            nephrolithiasis (kidney stones)
  JOURNAL   J Mol Med (Berl) 75 (3), 160-163 (1997)
   PUBMED   9106071
REFERENCE   6  (residues 1 to 78)
  AUTHORS   Bateman,A.
  TITLE     The structure of a domain common to archaebacteria and the
            homocystinuria disease protein
  JOURNAL   Trends Biochem Sci 22 (1), 12-13 (1997)
   PUBMED   9020585
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012780.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00571.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Archangium violaceum"
                     /db_xref="taxon:83451"
     Protein         1..78
                     /product="CBS domain-containing protein"
                     /calculated_mol_wt=8091
     Region          1..>63
                     /region_name="YtoI"
                     /note="Predicted transcriptional regulator containing CBS
                     domains [Transcription]; COG4109"
                     /db_xref="CDD:443285"
ORIGIN      
        1 mssievalvp tdtllhalrv meqrgtsllp vvgeegglvg lvsrahvlag wkvdpllpva
       61 lvmaayegrr gggypasw
//
LOCUS       WP_235216850             354 aa            linear   BCT 02-MAR-2025
DEFINITION  Rieske 2Fe-2S domain-containing protein [Archangium violaceum].
ACCESSION   WP_235216850
VERSION     WP_235216850.1
KEYWORDS    RefSeq.
SOURCE      Archangium violaceum
  ORGANISM  Archangium violaceum
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Archangiaceae; Archangium.
REFERENCE   1  (residues 1 to 354)
  AUTHORS   Botelho,H.M., Leal,S.S., Veith,A., Prosinecki,V., Bauer,C.,
            Frohlich,R., Kletzin,A. and Gomes,C.M.
  TITLE     Role of a novel disulfide bridge within the all-beta fold of
            soluble Rieske proteins
  JOURNAL   J Biol Inorg Chem 15 (2), 271-281 (2010)
   PUBMED   19862563
REFERENCE   2  (residues 1 to 354)
  AUTHORS   Iwata,S., Saynovits,M., Link,T.A. and Michel,H.
  TITLE     Structure of a water soluble fragment of the 'Rieske' iron-sulfur
            protein of the bovine heart mitochondrial cytochrome bc1 complex
            determined by MAD phasing at 1.5 A resolution
  JOURNAL   Structure 4 (5), 567-579 (1996)
   PUBMED   8736555
REFERENCE   3  (residues 1 to 354)
  AUTHORS   Brandt,U., Yu,L., Yu,C.A. and Trumpower,B.L.
  TITLE     The mitochondrial targeting presequence of the Rieske iron-sulfur
            protein is processed in a single step after insertion into the
            cytochrome bc1 complex in mammals and retained as a subunit in the
            complex
  JOURNAL   J Biol Chem 268 (12), 8387-8390 (1993)
   PUBMED   8386158
REFERENCE   4  (residues 1 to 354)
  AUTHORS   Huang,J.T., Struck,F., Matzinger,D.F. and Levings,C.S. 3rd.
  TITLE     Functional analysis in yeast of cDNA coding for the mitochondrial
            Rieske iron-sulfur protein of higher plants
  JOURNAL   Proc Natl Acad Sci U S A 88 (23), 10716-10720 (1991)
   PUBMED   1961737
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012575.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00355.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Archangium violaceum"
                     /db_xref="taxon:83451"
     Protein         1..354
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /GO_function="GO:0051537 - 2 iron, 2 sulfur cluster
                     binding [Evidence IEA]"
                     /calculated_mol_wt=40336
     Region          1..>266
                     /region_name="PobA"
                     /note="Chlorophyllide a oxygenase/letal leaf spot protein
                     [Coenzyme transport and metabolism]; COG5749"
                     /db_xref="CDD:444459"
ORIGIN      
        1 meplpnaplp dvtrffhpvl parklkdkpv rvelagraya lfrdaqgrpa aladacphrm
       61 aplsagrvtr egqlecpyhg wrfdadghgr spsqpdlkkc darafqlver fgylwlsard
      121 tplsafpdfa pegydfngaf smlfraplhv tldnfsedeh tpfvhtrlgw nraqakdisy
      181 eahnfedrte vryrapqrps flipllllrn gdffhnhwvt rfdpvrtdyt itwtgpageq
      241 rpftnraiif fvpetahttr lhtfsfgqlh darlrpllpl vrraalvlsw yevrddarfi
      301 plvahtpysl kgmrlgkydk plihhrklle riyfsggdas spptplplpe aang
//
LOCUS       WP_235216883             342 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Archangium violaceum].
ACCESSION   WP_235216883
VERSION     WP_235216883.1
KEYWORDS    RefSeq.
SOURCE      Archangium violaceum
  ORGANISM  Archangium violaceum
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Archangiaceae; Archangium.
REFERENCE   1  (residues 1 to 342)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Archangium violaceum"
                     /db_xref="taxon:83451"
     Protein         1..342
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=36768
     Region          60..303
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Site            order(64,66,100,135..136,205,277)
                     /site_type="active"
                     /db_xref="CDD:277317"
     Site            order(64,66,100,135,205,277)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277317"
ORIGIN      
        1 mrvftrvfpe ertvpptlrp lvlpllvpll laaappaaap apprledavp dtftgvervv
       61 avgdvhgdve alkevlrlak lidkkgrwsg gkahlvqtgd ipdrgehtre afellmrleg
      121 earaaggrvh allgnhetmn mlgdlryvap gemasfadqs pepdasgspr glnghraayg
      181 pqgrygrwlr thpavvrind tlfvhggvap evpaktlpel nrwvrqdlfp gnppggardp
      241 qgplwfrgya lgqeeeaapa leavlqrfga krmvmghttd rdgkirtrld gkavfidtgl
      301 stgygrhlsa lelrggkvta lyadgrvelv apeavkagkv sp
//
LOCUS       WP_235216897             350 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Archangium violaceum].
ACCESSION   WP_235216897
VERSION     WP_235216897.1
KEYWORDS    RefSeq.
SOURCE      Archangium violaceum
  ORGANISM  Archangium violaceum
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Archangiaceae; Archangium.
REFERENCE   1  (residues 1 to 350)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Archangium violaceum"
                     /db_xref="taxon:83451"
     Protein         1..350
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=39590
     Region          4..>159
                     /region_name="COG4757"
                     /note="Predicted alpha/beta hydrolase [General function
                     prediction only]"
                     /db_xref="CDD:443790"
     Region          13..349
                     /region_name="PLN02872"
                     /note="triacylglycerol lipase"
                     /db_xref="CDD:215470"
ORIGIN      
        1 mrlmdtlpaa erhevqagdg vplrltryqg gtkgpvllvh gagvwsgmfk lptisenfvq
       61 ylarhgydtw lldwrastql plrqfsldea aehdmpaavr kvrevtkads vqavvhcags
      121 vtffmslaag ylpdvrnvva sqvalhhrvp rstllksrmr lpdildvavn ymspdegtqn
      181 prlqaafgkm vdlvyrecds tvchrlsfly grlyrharln tqtherlheq fgrcnmqtfr
      241 hlaqmaragh avrydygkee nlrrygtvkp pdyldpkhle lpitfvvgeh nqtylptase
      301 ltyewlreah gaalyerkml pgyghldtfm gstasrdtyp vilqaldara
//
LOCUS       WP_235216969             226 aa            linear   BCT 02-MAR-2025
DEFINITION  imm11 family protein [Archangium violaceum].
ACCESSION   WP_235216969
VERSION     WP_235216969.1
KEYWORDS    RefSeq.
SOURCE      Archangium violaceum
  ORGANISM  Archangium violaceum
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Archangiaceae; Archangium.
REFERENCE   1  (residues 1 to 226)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019408.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07791.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Archangium violaceum"
                     /db_xref="taxon:83451"
     Protein         1..226
                     /product="imm11 family protein"
                     /calculated_mol_wt=24956
ORIGIN      
        1 mtlsqhffel eedtwgthdt qfwglepdns gegpdcprcg epigplawlp phrvrlelyg
       61 qglgdfvrgp gggnsflise rfaeafrteg ltgllgfhpa evlrvqrkrk gpkpgavpry
      121 favtpcysra avdeahsrir rvepvtcpec rysgldsihg ytlepgtwsg edvfrprglp
      181 gsivvserfa elvqrhgltn mklipteefv wdplrlgppp apapcv
//
LOCUS       WP_235216974             372 aa            linear   BCT 02-MAR-2025
DEFINITION  CDP-alcohol phosphatidyltransferase family protein [Archangium
            violaceum].
ACCESSION   WP_235216974
VERSION     WP_235216974.1
KEYWORDS    RefSeq.
SOURCE      Archangium violaceum
  ORGANISM  Archangium violaceum
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Archangiaceae; Archangium.
REFERENCE   1  (residues 1 to 372)
  AUTHORS   Morein,S., Trouard,T.P., Hauksson,J.B., Rilfors,L., Arvidson,G. and
            Lindblom,G.
  TITLE     Two-dimensional 1H-NMR of transmembrane peptides from Escherichia
            coli phosphatidylglycerophosphate synthase in micelles
  JOURNAL   Eur J Biochem 241 (2), 489-497 (1996)
   PUBMED   8917447
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013250.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01066.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Archangium violaceum"
                     /db_xref="taxon:83451"
     Protein         1..372
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0016780 - phosphotransferase activity,
                     for other substituted phosphate groups [Evidence IEA]"
                     /GO_process="GO:0008654 - phospholipid biosynthetic
                     process [Evidence IEA]"
                     /calculated_mol_wt=42040
     Region          45..169
                     /region_name="EPT1"
                     /note="sn-1,2-diacylglycerol ethanolamine- and
                     cholinephosphotranferases [Lipid transport and
                     metabolism]; COG5050"
                     /db_xref="CDD:444050"
ORIGIN      
        1 msthqarale phelvldkqq sykrleedal irvvreecrh favhhlpyrl spvvlgipgl
       61 llhlfllaav htferarwmy alwvvcrvlh fcldamdgtq arrngtqsta rhfwdhwvdv
      121 mnsamavliv aqlgprqgvy flpyilltat gqlffylglc ryfatgvmrd pyinhlwnyv
      181 fclflglsvc vfgvgilevp afqltyalas lvafgagaws llqdvvlmyr splssprfyv
      241 riltapvlil glyvtwmrdw sdvfsaralv alamsslavg vharqlvnkp pawltvesml
      301 fllliplsav pvalqpalhh glllvmmltl iismcrylre misqypeigf plvwlssthr
      361 pvlhtvsnkl aa
//
LOCUS       WP_235216988              98 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Archangium violaceum].
ACCESSION   WP_235216988
VERSION     WP_235216988.1
KEYWORDS    RefSeq.
SOURCE      Archangium violaceum
  ORGANISM  Archangium violaceum
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Archangiaceae; Archangium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Archangium violaceum"
                     /db_xref="taxon:83451"
     Protein         <1..98
                     /product="Ig-like domain-containing protein"
     Region          <1..40
                     /region_name="Big_13"
                     /note="Bacterial Ig-like domain; pfam19077"
                     /db_xref="CDD:465968"
     Region          <4..86
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
ORIGIN      
        1 gawsftmpwl lsqgahtvea iatdaagnis ppsaaisftv elppdsspge dppasgcgca
       61 stsasagsws lwglglmltr lrsrrrpasp sltgesrn
//
LOCUS       WP_235217006             410 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Archangium violaceum].
ACCESSION   WP_235217006
VERSION     WP_235217006.1
KEYWORDS    RefSeq.
SOURCE      Archangium violaceum
  ORGANISM  Archangium violaceum
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Archangiaceae; Archangium.
REFERENCE   1  (residues 1 to 410)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 410)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 410)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 410)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Archangium violaceum"
                     /db_xref="taxon:83451"
     Protein         1..410
                     /product="ATP-binding protein"
                     /calculated_mol_wt=45100
     Region          67..172
                     /region_name="PAS_4"
                     /note="PAS fold; pfam08448"
                     /db_xref="CDD:312075"
     Region          <169..407
                     /region_name="COG4251"
                     /note="Bacteriophytochrome (light-regulated signal
                     transduction histidine kinase) [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443393"
ORIGIN      
        1 metrrsettv eelleviarm aanepnvrcr vgegplapla talntlsgel dsrrirsdet
       61 fgpevlvsqs pvammacdad erirymnytf pgltlsevvg rknseftppe dvemvrghvr
      121 hvlttgepvf yehrpnigfg pewfgvhvgp irsggevvgf tmsltdisel krtqfrleqs
      181 nrelesfasv ashdlqeplr kiqtfgerlk ttcgaalspe grdylermsn aagrmrrlid
      241 dllsfsriss raptfvrvdl grvarevsgd letaieqsga svtigelptl eaepmqmrql
      301 lqnlvsnalk frqeglapsi sisatvdada gqcelrvadn gigfdekyld rifnvfqrlh
      361 grgkyegtgi glaicrkive rhggcigars tpgqgatflv tlplkppqpr
//
LOCUS       WP_235217056             162 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylneuraminate synthase family protein, partial [Archangium
            violaceum].
ACCESSION   WP_235217056
VERSION     WP_235217056.1
KEYWORDS    RefSeq.
SOURCE      Archangium violaceum
  ORGANISM  Archangium violaceum
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Archangiaceae; Archangium.
REFERENCE   1  (residues 1 to 162)
  AUTHORS   Nakata,D., Close,B.E., Colley,K.J., Matsuda,T. and Kitajima,K.
  TITLE     Molecular cloning and expression of the mouse N-acetylneuraminic
            acid 9-phosphate synthase which does not have deaminoneuraminic
            acid (KDN) 9-phosphate synthase activity
  JOURNAL   Biochem Biophys Res Commun 273 (2), 642-648 (2000)
   PUBMED   10873658
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015087.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03102.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Archangium violaceum"
                     /db_xref="taxon:83451"
     Protein         1..>162
                     /product="N-acetylneuraminate synthase family protein"
                     /GO_process="GO:0016051 - carbohydrate biosynthetic
                     process [Evidence IEA]"
     Region          19..>161
                     /region_name="AroGA"
                     /note="3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP)
                     synthase [Amino acid transport and metabolism]; COG2876"
                     /db_xref="CDD:442123"
ORIGIN      
        1 msgkpgeegg gppregtprv arawkpqgtr vrvgqvevgg pgfvvmagpc avegmeqteh
       61 tasavaaaga hvlrggvfkp rtspysfqgm gepglrvlae aarkvglpiv sevmestqip
      121 mmedsvdvlq vgarnmqnfp llralgktrk pvllkrglaa tf
//
LOCUS       WP_235217082             885 aa            linear   BCT 02-MAR-2025
DEFINITION  galactose oxidase-like domain-containing protein [Archangium
            violaceum].
ACCESSION   WP_235217082
VERSION     WP_235217082.1
KEYWORDS    RefSeq.
SOURCE      Archangium violaceum
  ORGANISM  Archangium violaceum
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Archangiaceae; Archangium.
REFERENCE   1  (residues 1 to 885)
  AUTHORS   Doman-Pytka,M. and Bardowski,J.
  TITLE     Pullulan degrading enzymes of bacterial origin
  JOURNAL   Crit Rev Microbiol 30 (2), 107-121 (2004)
   PUBMED   15239382
REFERENCE   2  (residues 1 to 885)
  AUTHORS   Oslancova,A. and Janecek,S.
  TITLE     Oligo-1,6-glucosidase and neopullulanase enzyme subfamilies from
            the alpha-amylase family defined by the fifth conserved sequence
            region
  JOURNAL   Cell Mol Life Sci 59 (11), 1945-1959 (2002)
   PUBMED   12530525
REFERENCE   3  (residues 1 to 885)
  AUTHORS   Lee,H.S., Kim,M.S., Cho,H.S., Kim,J.I., Kim,T.J., Choi,J.H.,
            Park,C., Lee,H.S., Oh,B.H. and Park,K.H.
  TITLE     Cyclomaltodextrinase, neopullulanase, and maltogenic amylase are
            nearly indistinguishable from each other
  JOURNAL   J Biol Chem 277 (24), 21891-21897 (2002)
   PUBMED   11923309
REFERENCE   4  (residues 1 to 885)
  AUTHORS   Firbank,S.J., Rogers,M.S., Wilmot,C.M., Dooley,D.M., Halcrow,M.A.,
            Knowles,P.F., McPherson,M.J. and Phillips,S.E.
  TITLE     Crystal structure of the precursor of galactose oxidase: an unusual
            self-processing enzyme
  JOURNAL   Proc Natl Acad Sci U S A 98 (23), 12932-12937 (2001)
   PUBMED   11698678
REFERENCE   5  (residues 1 to 885)
  AUTHORS   Park,K.H., Kim,T.J., Cheong,T.K., Kim,J.W., Oh,B.H. and Svensson,B.
  TITLE     Structure, specificity and function of cyclomaltodextrinase, a
            multispecific enzyme of the alpha-amylase family
  JOURNAL   Biochim Biophys Acta 1478 (2), 165-185 (2000)
   PUBMED   10825529
REFERENCE   6  (residues 1 to 885)
  AUTHORS   Ito,N., Phillips,S.E., Yadav,K.D. and Knowles,P.F.
  TITLE     Crystal structure of a free radical enzyme, galactose oxidase
  JOURNAL   J Mol Biol 238 (5), 794-814 (1994)
   PUBMED   8182749
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020683.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09118.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Archangium violaceum"
                     /db_xref="taxon:83451"
     Protein         1..885
                     /product="galactose oxidase-like domain-containing
                     protein"
                     /calculated_mol_wt=94655
     Region          64..343
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          219..262
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          266..317
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          356..453
                     /region_name="E_set_GO_C"
                     /note="C-terminal Early set domain associated with the
                     catalytic domain of galactose oxidase; cd02851"
                     /db_xref="CDD:199882"
ORIGIN      
        1 mllavmppva daadpkvage wspmtafpis fthahllptg kvmffgefde gllpprlwdp
       61 atgaltnlpl pdynifcsgh syladgrlll tgghelshvg ypyvtifdpf tltwsrtqdm
      121 ndnrwyptnt tlqngdvvvl sgethaagst nplpqvweak tgrwrdltta iqdlpyyprm
      181 flapngklff agpwrrsrwl dpegtgtwfd gpssvyngrs ygaavmigsk vliigggspa
      241 tatveeidls qpsptwvtra pmawprrqln atllpdgkvl vtggssgedf ddddlpvkvp
      301 elydpdtntw tklapavdyr gyhsaalllp dgrvltgggr nrrtteifsp pyleqdgprp
      361 iiqgtpavit pgtqfllqta daarvakvtm lalgsvthaf dqhqrflkls ftqasgglqv
      421 sapvnnlaap pgyymlflvd grgvpsvgri vkvgvvepaa kkkilfsdtw kyddrgvdqg
      481 tawlardfdd sawksgpgql gygdddegtv ltpgsptvyf rkkitleniv teanlevlyd
      541 daiavwingv qvfsrnmgng tafgvtatss ttnayeraql slapnpfrig envitamvkq
      601 vsvnsndltf alslavaqls gpvpdtlvvs spnggevlqp gtsmpitwss tgnvpsvdla
      661 lsadgaaswt piafgvpntg lyawtvpdln tsqalvrvsr vggttplsdv snapftisrq
      721 vsvmaipfrs twkyldtgvd pgaawstagf ddtawpsgaa qlgygdgdea tvlnrttpsq
      781 ssvyfrkkit vngivtqanl rvlfddgiav fvngtqvfgr nvdkgvahdk yasagtenel
      841 asgplptgvf vpgentiavv vkqtgatspd ltfdlelqlg vvpsp
//
LOCUS       WP_235217161             481 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2380 domain-containing protein [Archangium violaceum].
ACCESSION   WP_235217161
VERSION     WP_235217161.1
KEYWORDS    RefSeq.
SOURCE      Archangium violaceum
  ORGANISM  Archangium violaceum
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Archangiaceae; Archangium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021078.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09533.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Archangium violaceum"
                     /db_xref="taxon:83451"
     Protein         1..481
                     /product="DUF2380 domain-containing protein"
                     /calculated_mol_wt=52055
     Region          <374..471
                     /region_name="DUF2380"
                     /note="Predicted lipoprotein of unknown function
                     (DUF2380); cl15289"
                     /db_xref="CDD:449527"
ORIGIN      
        1 mrtrhwvvwf alsvlstgca sltpppgrgt hlrysphgaa vtmgsprssg dtggsahvgd
       61 aaelarrsal aahlsfagal gevsrstrri sselsrlkts sglvghyrrv fvpfvdhasq
      121 qlrwmetgla mathlstlas emedpdmrla llrlggprlq sallgsllls vwldllllad
      181 vvltqcpsys verlagemdq lwtmlgpamt alaslepvqv daaaadlpal vghltgefav
      241 treralksge nlqkillvkd lieslatasv mkmalprmwg patsatlgvg lmvgadgvmm
      301 gtrlvvsaew vemmrrlvqa gvislpavsa avrihagqll mseskrdlpr gvrqalgdgp
      361 evgamretgr tgagmaeppr hhvlpqefre wfeqrgftgd mridkfcvrl evarhqaihg
      421 ggnwrlgrtw pgewnqmimk alrraetrag qmltpreilk vvaeymtdyg ismnftscgg
      481 r
//
LOCUS       WP_235217174             904 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Archangium violaceum].
ACCESSION   WP_235217174
VERSION     WP_235217174.1
KEYWORDS    RefSeq.
SOURCE      Archangium violaceum
  ORGANISM  Archangium violaceum
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Archangiaceae; Archangium.
REFERENCE   1  (residues 1 to 904)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 904)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Archangium violaceum"
                     /db_xref="taxon:83451"
     Protein         1..904
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=96133
     Region          337..505
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(347,380,481,484)
                     /site_type="active"
                     /db_xref="CDD:238863"
     Region          721..889
                     /region_name="SGNH_hydrolase_peri1"
                     /note="SGNH_peri1; putative periplasmic member of the
                     SGNH-family of hydrolases, a diverse family of lipases and
                     esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known...; cd01825"
                     /db_xref="CDD:238863"
     Site            order(734,767,865,868)
                     /site_type="active"
                     /db_xref="CDD:238863"
ORIGIN      
        1 mtlaltlala vglslaplpe awrpipslsq gpvvpqlial vttssaaakr kaigvepdtg
       61 papevpelpe eeeetelvea dtasgsdggt papppvvada sdtlglanlg patltkatrm
      121 ealrekmgsk hvdldpgcrr mgasgceesg lepffkalra lhngsrttpv rvehlgdsli
      181 asdhindvvr erlqerhgsg gkgflyidrp trsgrgvrag qasegwefir vidrspprdr
      241 lpftgvafta sakgsqdvrf digdartaei fflaqpmggs vqvlvdgkql qrlqtrwtpa
      301 evanarvklp egaktltlkt rgkvelhgvs lengepgvvy dtlglpgaya gvflrthppy
      361 fraqmrqrkp slvvlmfggn eafrlsrdwt kpeeikqeae qlvkrvresv pdaaclvwsp
      421 idaavrtmgg elvprrgsrm vadifrdaak eggcawwdal eamggegaai rwlsagllnq
      481 dlihprargs dllghlfdla iqrayaassp priaaepsgl qngeksltat frrlsklekg
      541 edarlgilqi gashtashyf tdamrnalak rfgdagrgfi sagkpserlk pagvsreltg
      601 ewtvedalqa ttpgqawglg gtravgapga slrirfcegc taattpparl slywldgpgs
      661 grmevkvdgs amppepappe pftaptvrvr sfpvtgpahe levlnpgggp ltvlgaaldl
      721 eqkgiaydav glpgstastl agmdpqalsa qlssrkpqll vfwygtnesg qqdldaeklr
      781 teygalisrl rkdaggaecl vigttdrmqk gadgsweeap alarvvtalp emaraqgcay
      841 wspraamggd wsllrwqreg lghsdgihlt pagyeklags flsdllaaye vfktqppala
      901 aegg
//
LOCUS       WP_235217265            1016 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Burkholderia multivorans].
ACCESSION   WP_235217265
VERSION     WP_235217265.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia multivorans
  ORGANISM  Burkholderia multivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (residues 1 to 1016)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 1016)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 1016)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 1016)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Burkholderia multivorans"
                     /db_xref="taxon:87883"
     Protein         1..1016
                     /product="ATP-binding protein"
                     /calculated_mol_wt=108001
     Region          <468..995
                     /region_name="PRK10841"
                     /note="two-component system sensor histidine kinase RcsC"
                     /db_xref="CDD:182772"
ORIGIN      
        1 mpdsslqsir ryqnismfgg givvtvlili acalgmasiv ygyldgerrn ylagfvqtln
       61 eikvsetsfr ngvsnaqliw rdidrapddv vdafyasdqq iaitpypsvv fgvpgqtadr
      121 revarylsls vllaricaas sinrgyalig yhystrtamf glvpnsrgdg aglatpdera
      181 rtldalridf gdappsaghg rphvrwlppf idpvsgerri riaaqaqvdg epfavlvtey
      241 apdyllswvp snaadgtffv ttadnrlvta gpgvahddar iarllaldva repgdadepv
      301 frgghvvfrg tldktgwtla yalswthiva tvalraglll gaslltiaim wvllvrfhhr
      361 vltgvyarsq rvfdseslcr sviemspigl glisradgrf mlvspvlaer varlgcdcgt
      421 lsaqilaqyr agasnapfqi elvlpdaqaa agadapplhl eviardaryq asdvlivavv
      481 dvtakrqlvq kleeavraad sanaakssfl aamsheirtp lnvilgnlel lerstldlpq
      541 rsrvqtlrna asgllelvsg ildftkveag ampvesiefd aigviarelg ayapvakakg
      601 lplfceiaas asqrmrgdpt rlaqvfgnll snaikftahg hvtarvravr gecgtaelai
      661 aiedtgigig sadlhklfra fsqvdatiar ryggtglgla lcdrlvsamg griavtsapg
      721 agscftvrlp lgldvepiaa pvacdagtll lvarqaewrq falphlaawg fdvrvyacpt
      781 qipaarctra saivlfgdad ewprdaldrl agsapvvlat pdgplepgrv grmmrvssya
      841 lgalraalmp ardgtaaiap fdgtaepavd grttmrvlla ddasvngtil reqldalgca
      901 vhvvglagaa ldllyrsdwd llligtdlpd maacalaeav hargmpcsva ivtthlapdd
      961 arrcaaanvq svltkpvtlv rlrgvlagva rrrgkhvdev krqeqdmaql shdgia
//
LOCUS       WP_235217325             456 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Streptomyces noursei].
ACCESSION   WP_235217325
VERSION     WP_235217325.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..456
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=46224
     Region          11..454
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(18..19,22..23,26,58,108..109,111..113,116,153,
                     156..157,172,268,271..272,275..277,280,315,319,369..370,
                     374,378,394,397..398,401..402,405)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 msvpsaligp llafvlldgf lqgsvvsllp virdalhigt gqamwitaaq flsaavcvpa
       61 fgrlgdlhgh rrilrialgt vtvgsllcal aptlevflag rvllgplssl lplsvglvrd
      121 rldtagsrra isllaaalil gatagtatag plasvagggr tvlwnlavla tagfalaftp
      181 riaetlrlas grmdwkgavl lglgltlllg svsqgtergw lsplvlggll lapvtlglwv
      241 rsslrsrepl vdvramasra ispafacgfa agvvvlggqg vtvafldavp eeagygfglp
      301 hwqiglwiav palisfltag asaavgrrlg yramltvafl lvaagfgvei aghavmatwy
      361 aghmlagagi glavsglptv itegsprdra aastavyynl ktaggsiaga aaaavfssll
      421 trstqqpsln aylllwgvcg vlalasaali rltprt
//
LOCUS       WP_235217338             203 aa            linear   BCT 02-MAR-2025
DEFINITION  lipoprotein [Streptomyces noursei].
ACCESSION   WP_235217338
VERSION     WP_235217338.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039509.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18966.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..203
                     /product="lipoprotein"
                     /calculated_mol_wt=21888
     Region          36..199
                     /region_name="Lipoprotein_23"
                     /note="Uncharacterized lipoprotein; pfam18966"
                     /db_xref="CDD:436872"
ORIGIN      
        1 mssrvrrwsa gllgavllag aslgcsrneg ehgdeaehve svggarsace lpvafeiptp
       61 wkkpsdgntv daerssryas cnlelgsgkt ktdlwvvvyd kgrasadplk alldhdgygm
      121 snygeyyrgq yenrltvagh saaemgytvt pptvddksfh rrmlsvrtpd ativlgvrtd
      181 npgaddrtrk aldrvksslr map
//
LOCUS       WP_235217453             668 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent monooxygenase [Streptomyces noursei].
ACCESSION   WP_235217453
VERSION     WP_235217453.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 668)
  AUTHORS   Schreuder,H.A., van der Laan,J.M., Swarte,M.B., Kalk,K.H., Hol,W.G.
            and Drenth,J.
  TITLE     Crystal structure of the reduced form of p-hydroxybenzoate
            hydroxylase refined at 2.3 A resolution
  JOURNAL   Proteins 14 (2), 178-190 (1992)
   PUBMED   1409567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01494.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..668
                     /product="FAD-dependent monooxygenase"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /calculated_mol_wt=70586
     Region          28..>417
                     /region_name="PRK06184"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:235728"
ORIGIN      
        1 malnsvketf anptegtfea aagdatappv dvlisgagpt glalgidlar rgvttliver
       61 qdtlsrgarg tgiqprtqev yddlgvlpaa haasglyppm glwedgrivr themvergvp
      121 tpsapyadir mlpqwrnvrl lhdrlcdlgg svqldttltd ftqdddgvta rltgpgaavr
      181 tvrarylvac dggastvrkr ldvrmtgpel aqghavladv rldgldrdhw hrwtlpnggf
      241 vsllpmagtd dfqllvaaag aepdtshetv rdliaththl trdqvrevlw tslyrpkagm
      301 vdayrhgrvf lagdaahihs paggqglnts vqdgynlgwk lgqvlrhgap dalldtyeae
      361 rrpiaadila tstrlhrsrs lrrgpdlhql gigypnsplt relrtglaeg artagdrapd
      421 apappptapp passtpsaar tspcspstpp twtpppspkr papppstpst saappptsst
      481 ptatsarpta ppppssssap tatsrwrprr rrrrrrsatr wrrtpvgpgs rsegapglrr
      541 prpvgsrphl rpgecgtrfp hraggpcaas fkgapgalpa grtgtasrar glerdgpfrs
      601 gassagedpy apspaslaae sspapspsss pssssasgsl snwsnraprl fetrwtlarw
      661 afnstask
//
LOCUS       WP_235217533             475 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4334 domain-containing protein [Streptomyces noursei].
ACCESSION   WP_235217533
VERSION     WP_235217533.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14232.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..475
                     /product="DUF4334 domain-containing protein"
                     /calculated_mol_wt=52232
     Region          44..249
                     /region_name="Terpene_syn_C_2"
                     /note="Terpene synthase family 2, C-terminal metal
                     binding; pfam19086"
                     /db_xref="CDD:465972"
     Region          340..398
                     /region_name="GXWXG"
                     /note="GXWXG protein; pfam14231"
                     /db_xref="CDD:433793"
     Region          407..462
                     /region_name="DUF4334"
                     /note="Domain of unknown function (DUF4334); pfam14232"
                     /db_xref="CDD:433794"
ORIGIN      
        1 mprldiwlkg lglpvspalv plmclqtaff tpwlppercy llsrltvwlm aidnvldtpe
       61 lpfpqgplgt gtgqraterd ttdarvrawh evlagradgs tsadpvtral aeivaamehd
      121 grpelltvwr ksmhqtlvgm drereaarta atgggmpcla dylthgawti gveqqvtalw
      181 almdepdlpr rlpvlrgalr qaaiairlln dlrghqrerh egktdalaig lgqqeayqra
      241 etalddcrrs lapltaagyg savalerval wharmyhrfd pvrpgradsa plpgepgatq
      301 hapatpsarr pketppmste qevldviasg geyddatlae lfdrlepvdv dllvgtwegg
      361 gfertsenaa qlahmrwygk rfvdaehvep llcrdehgav fsfegmglat lrevvfrgkq
      421 saamvydqlp ivdhfrrltd dvllcvmdkk ddpadfyfhl trvagpvspp agedn
//
LOCUS       WP_235217473             508 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase 87 family protein [Streptomyces noursei].
ACCESSION   WP_235217473
VERSION     WP_235217473.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 508)
  AUTHORS   Birch,H.L., Alderwick,L.J., Bhatt,A., Rittmann,D., Krumbach,K.,
            Singh,A., Bai,Y., Lowary,T.L., Eggeling,L. and Besra,G.S.
  TITLE     Biosynthesis of mycobacterial arabinogalactan: identification of a
            novel alpha(1-->3) arabinofuranosyltransferase
  JOURNAL   Mol Microbiol 69 (5), 1191-1206 (2008)
   PUBMED   18627460
REFERENCE   2  (residues 1 to 508)
  AUTHORS   Morita,Y.S., Sena,C.B., Waller,R.F., Kurokawa,K., Sernee,M.F.,
            Nakatani,F., Haites,R.E., Billman-Jacobe,H., McConville,M.J.,
            Maeda,Y. and Kinoshita,T.
  TITLE     PimE is a polyprenol-phosphate-mannose-dependent
            mannosyltransferase that transfers the fifth mannose of
            phosphatidylinositol mannoside in mycobacteria
  JOURNAL   J Biol Chem 281 (35), 25143-25155 (2006)
   PUBMED   16803893
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021134.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09594.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..508
                     /product="glycosyltransferase 87 family protein"
                     /GO_function="GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=52644
ORIGIN      
        1 mkhqlackst nlgqcgrlgw glrtprrtgg gprrstcrea wgwsacaiaa lglalfttlp
       61 phrtwslsaa vgygcaamta arlakrrrps rsavfphels lilavmgsvv vpllllvwds
      121 saqlevavve csgdlllhsg spyipapttv gdynpylpgm avfglphalf gggpltdarw
      181 wmagaffvtm aaatrtlfrr grgvaggrpg aptaprfata pvllwlaacp lvalplavgg
      241 idlpviglmc wglaaaangt pgraglliga aaalkwtawp aapvvlalva arhgrrsala
      301 aaaataltvl tavvpfllta prafvenvla fplglgsats paasplpgwl latyvprgai
      361 iamvllavaa igvagslair pprtvraaad rlaiglalam almpatrfgy lvyplvlwaw
      421 prlmqvatat gprsaicrrs ldhaslsevv lgdlseeigp gvvpgpdqrq adglrqgcgt
      481 ghvsvpqrvt eqadrkrrap evgeetml
//
LOCUS       WP_235217546             182 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Streptomyces noursei].
ACCESSION   WP_235217546
VERSION     WP_235217546.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..182
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=19724
     Region          29..168
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mticqhvtgq ngmegdvqvs yvgsylwelr qkvgsrpllv pgaqvlllda agrglfqqra
       61 dngvwelpag aceeggdfve tarrelaeet glhvergdle afgslsdpav htltypngdv
      121 thcfalcfva rqwsgelspg adevtraqfr alsdpprplh pptavvlemf refgstgrfq
      181 ar
//
LOCUS       WP_235218377             519 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: extracellular solute-binding protein [unclassified
            Paenibacillus].
ACCESSION   WP_235218377
VERSION     WP_235218377.1
KEYWORDS    RefSeq.
SOURCE      unclassified Paenibacillus
  ORGANISM  unclassified Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 519)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 519)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 519)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 519)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="unclassified Paenibacillus"
                     /db_xref="taxon:185978"
     Protein         1..519
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=57416
     Region          48..>413
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mtkttsrktl aatmavtltl gllsacgggn nsgtkqegva atpgagavke lslfidfpww
       61 atkdwkgpia ekitektgvk lnvtvatddk qlplmiasgd lpdlvltssn vgrmsdakls
      121 yswnelieky apdfkldatr iaintmddgn fytvrnafat qeemsknkfa lggdgnpgia
      181 vredilkelg nppiktlddf vkvlgmvkek ypdmvplvld knwieqyflq qfgaealfdn
      241 wveqdgkvdy firqpqmlef fkfmnslyrg gyilaenfaf andqideqya tsgkafahgh
      301 tvgtadtdns avkknngtft fkmlpsaltk eakkvstglg fagtfitkkn knpeasikll
      361 qylasdegkk ltmfgvegeh wtwneeghpd lkydssdqdf mnangigwwv lyndgvmegm
      421 rgyvpgkqkt qalmetkait tykpalgliq tqpdsaektl ktkidemikn ekvkiylags
      481 eaeavanyen lvktaeslgl qqlvdwandt yqkkkelfk
//
LOCUS       WP_235218399              91 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: PilZ domain-containing protein [Paenibacillus].
ACCESSION   WP_235218399
VERSION     WP_235218399.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus
  ORGANISM  Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae.
REFERENCE   1  (residues 1 to 91)
  AUTHORS   Galperin,M.Y. and Chou,S.H.
  TITLE     Structural Conservation and Diversity of PilZ-Related Domains
  JOURNAL   J Bacteriol 202 (4), e00664-19 (2020)
   PUBMED   31740493
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 91)
  AUTHORS   Paul,K., Nieto,V., Carlquist,W.C., Blair,D.F. and Harshey,R.M.
  TITLE     The c-di-GMP binding protein YcgR controls flagellar motor
            direction and speed to affect chemotaxis by a 'backstop brake'
            mechanism
  JOURNAL   Mol Cell 38 (1), 128-139 (2010)
   PUBMED   20346719
REFERENCE   3  (residues 1 to 91)
  AUTHORS   Benach,J., Swaminathan,S.S., Tamayo,R., Handelman,S.K.,
            Folta-Stogniew,E., Ramos,J.E., Forouhar,F., Neely,H.,
            Seetharaman,J., Camilli,A. and Hunt,J.F.
  TITLE     The structural basis of cyclic diguanylate signal transduction by
            PilZ domains
  JOURNAL   EMBO J 26 (24), 5153-5166 (2007)
   PUBMED   18034161
REFERENCE   4  (residues 1 to 91)
  AUTHORS   Ryjenkov,D.A., Simm,R., Romling,U. and Gomelsky,M.
  TITLE     The PilZ domain is a receptor for the second messenger c-di-GMP:
            the PilZ domain protein YcgR controls motility in enterobacteria
  JOURNAL   J Biol Chem 281 (41), 30310-30314 (2006)
   PUBMED   16920715
REFERENCE   5  (residues 1 to 91)
  AUTHORS   Amikam,D. and Galperin,M.Y.
  TITLE     PilZ domain is part of the bacterial c-di-GMP binding protein
  JOURNAL   Bioinformatics 22 (1), 3-6 (2006)
   PUBMED   16249258
REFERENCE   6  (residues 1 to 91)
  AUTHORS   Alm,R.A., Bodero,A.J., Free,P.D. and Mattick,J.S.
  TITLE     Identification of a novel gene, pilZ, essential for type 4 fimbrial
            biogenesis in Pseudomonas aeruginosa
  JOURNAL   J Bacteriol 178 (1), 46-53 (1996)
   PUBMED   8550441
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018894.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07238.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Paenibacillus"
                     /db_xref="taxon:44249"
     Protein         1..91
                     /product="PilZ domain-containing protein"
                     /GO_function="GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /calculated_mol_wt=10379
     Region          <3..64
                     /region_name="YcgR"
                     /note="Cyclic di-GMP-binding flagellar brake protein
                     FlgZ/YcgR, contains PilZNR(YcgR) and PilZ domains [Cell
                     motility]; COG5581"
                     /db_xref="CDD:444320"
ORIGIN      
        1 mtegilldls rsgckvrtsl nlrftagdtk liihfqlaee klqyegsvrw gwmfglgqyq
       61 ygvrldlqed eeeqllrele lwtsgrsaqg l
//
LOCUS       WP_235218403             202 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: universal stress protein [unclassified
            Paenibacillus].
ACCESSION   WP_235218403
VERSION     WP_235218403.1
KEYWORDS    RefSeq.
SOURCE      unclassified Paenibacillus
  ORGANISM  unclassified Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 202)
  AUTHORS   Sousa,M.C. and McKay,D.B.
  TITLE     Structure of the universal stress protein of Haemophilus influenzae
  JOURNAL   Structure 9 (12), 1135-1141 (2001)
   PUBMED   11738040
REFERENCE   2  (residues 1 to 202)
  AUTHORS   Zarembinski,T.I., Hung,L.W., Mueller-Dieckmann,H.J., Kim,K.K.,
            Yokota,H., Kim,R. and Kim,S.H.
  TITLE     Structure-based assignment of the biochemical function of a
            hypothetical protein: a test case of structural genomics
  JOURNAL   Proc Natl Acad Sci U S A 95 (26), 15189-15193 (1998)
   PUBMED   9860944
REFERENCE   3  (residues 1 to 202)
  AUTHORS   Nystrom,T. and Neidhardt,F.C.
  TITLE     Expression and role of the universal stress protein, UspA, of
            Escherichia coli during growth arrest
  JOURNAL   Mol Microbiol 11 (3), 537-544 (1994)
   PUBMED   8152377
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012791.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00582.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="unclassified Paenibacillus"
                     /db_xref="taxon:185978"
     Protein         1..202
                     /product="universal stress protein"
                     /calculated_mol_wt=23121
     Region          <1..124
                     /region_name="KdpD_non_kinase"
                     /note="KdpD-like non-kinase potassium sensor; NF038185"
                     /db_xref="CDD:468400"
ORIGIN      
        1 mvcvhygphg erlirrgvel semlgaplyv lnvessdsde ynhskemyma vwkrlaeeag
       61 aefmvrkrrg rkttdvivea aeekevtqii igqsaqtlwq eltkrnfvne liskmnmmdl
      121 hvvavqrmra gleetheegv isylvknega yqlsdepegd dyikgkffhe lhtefenglf
      181 kieqdgkary lhicegtlte pl
//
LOCUS       WP_235218462              63 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: FeoB-associated Cys-rich membrane protein
            [unclassified Paenibacillus].
ACCESSION   WP_235218462
VERSION     WP_235218462.1
KEYWORDS    RefSeq.
SOURCE      unclassified Paenibacillus
  ORGANISM  unclassified Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12669.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..63
                     /organism="unclassified Paenibacillus"
                     /db_xref="taxon:185978"
     Protein         1..63
                     /product="FeoB-associated Cys-rich membrane protein"
                     /calculated_mol_wt=6465
ORIGIN      
        1 mtamivnivi vtlifgysgw miyrhvqkgk qgacagcdkg ktcpaaamds plscgsatlg
       61 skr
//
LOCUS       WP_235218358             257 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6081 family protein [unclassified Paenibacillus].
ACCESSION   WP_235218358
VERSION     WP_235218358.1
KEYWORDS    RefSeq.
SOURCE      unclassified Paenibacillus
  ORGANISM  unclassified Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 257)
  AUTHORS   Hug,J.J., Panter,F., Krug,D. and Muller,R.
  TITLE     Genome mining reveals uncommon alkylpyrones as type III PKS
            products from myxobacteria
  JOURNAL   J Ind Microbiol Biotechnol 46 (3-4), 319-334 (2019)
   PUBMED   30506464
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039984.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19559.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="unclassified Paenibacillus"
                     /db_xref="taxon:185978"
     Protein         1..257
                     /product="DUF6081 family protein"
                     /calculated_mol_wt=28797
     Region          22..255
                     /region_name="DUF6081"
                     /note="Family of unknown function (DUF6081); pfam19559"
                     /db_xref="CDD:437391"
ORIGIN      
        1 mdkhlptned mpatqgkqmv igdfhtilee gkvwqtggfk lsdgsfwayr epeavvivrn
       61 dhlyvraqls rrhdqvqild nakhmyysar pvdipeagei rfelqirart qgtapgdlyd
      121 gyvslnlldf ttgaaldffa gndkyasvyg ilpfpgvtvp etggtkyfci fkentdfkpr
      181 efntyaityh rgnneavfyv ngnevrrern vpvkfnsfti algimtekdl tpegsvsahg
      241 qtviaewspi titttaq
//
LOCUS       WP_235218516             529 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Paenibacillus sp. FSL R7-269].
ACCESSION   WP_235218516
VERSION     WP_235218516.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL R7-269
  ORGANISM  Paenibacillus sp. FSL R7-269
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 529)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Paenibacillus sp. FSL R7-269"
                     /db_xref="taxon:1226755"
     Protein         1..529
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=60268
     Region          1..121
                     /region_name="REC_YesN-like"
                     /note="phosphoacceptor receiver (REC) domain of YesN and
                     related helix-turn-helix containing response regulators;
                     cd17536"
                     /db_xref="CDD:381091"
     Site            order(6..9,12..14,17,103..104)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381091"
     Region          <222..292
                     /region_name="GGDEF_2"
                     /note="GGDEF-like domain; pfam17853"
                     /db_xref="CDD:465533"
     Region          442..525
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
ORIGIN      
        1 miivddeera rvgittlidw qshgihivge ardglealel ldtyavdiml tdirmpqmdg
       61 lelikvvsek ypsvksvims gyddfayaqq airsgvsnyl lkpsrrqeil stvlaiteqi
      121 qsekleistl ehlrqgfres lpllkektls qliltespsy srllanlkmn qlvfpyllyg
      181 iillridnfq llhekymhed tellkyglkn iceeslpeav lcvafehqdd ivlilntdel
      241 pdqeelsgyi riiqeniasf lkftvsagig sidkniehlr hsfveacqal nttnytgiak
      301 iveysgefda essqssyplh eeqevlkavr ggspgdiadk ltlfnvalqp etvsrdqvik
      361 ssfalffaly klciennvnv nkvfgqnlte lihvlsrssl dnlfqsllet aqrvsehlts
      421 kknsnkllea aknyigehfm kdinreivar eiyitpgyls llfkqqlkis fidylhkvri
      481 ehacqlfkdp gmriedialq sgyndtkyfy qvfkkykglt pnqfrsnte
//
LOCUS       WP_235218545             203 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: LysE family transporter [unclassified Paenibacillus].
ACCESSION   WP_235218545
VERSION     WP_235218545.1
KEYWORDS    RefSeq.
SOURCE      unclassified Paenibacillus
  ORGANISM  unclassified Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 203)
  AUTHORS   Aleshin,V.V., Zakataeva,N.P. and Livshits,V.A.
  TITLE     A new family of amino-acid-efflux proteins
  JOURNAL   Trends Biochem Sci 24 (4), 133-135 (1999)
   PUBMED   10322417
REFERENCE   2  (residues 1 to 203)
  AUTHORS   Vrljic,M., Sahm,H. and Eggeling,L.
  TITLE     A new type of transporter with a new type of cellular function:
            L-lysine export from Corynebacterium glutamicum
  JOURNAL   Mol Microbiol 22 (5), 815-826 (1996)
   PUBMED   8971704
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013933.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01810.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="unclassified Paenibacillus"
                     /db_xref="taxon:185978"
     Protein         1..203
                     /product="LysE family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /calculated_mol_wt=21741
     Region          5..195
                     /region_name="LysE"
                     /note="LysE type translocator; cl00565"
                     /db_xref="CDD:444980"
ORIGIN      
        1 mvlglslsap igpinaaqld kglrggfmpa wavglgaisa diiymllvyl gmihlldapf
       61 vkaflwlfgf fvlvytgies imhsgeitaa etrgsgasls ksfisgflms lfnplsilfw
      121 lgiygsilak avneypmqql liysgaivlg illwdvtmaa assmfrsflt srvlkaisvl
      181 sglslvgfgl yfgiqavrll ffh
//
LOCUS       WP_235218572            2411 aa            linear   BCT 02-MAR-2025
DEFINITION  HYR domain-containing protein [Paenibacillus sp. FSL R7-269].
ACCESSION   WP_235218572
VERSION     WP_235218572.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL R7-269
  ORGANISM  Paenibacillus sp. FSL R7-269
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 2411)
  AUTHORS   Callebaut,I., Gilges,D., Vigon,I. and Mornon,J.P.
  TITLE     HYR, an extracellular module involved in cellular adhesion and
            related to the immunoglobulin-like fold
  JOURNAL   Protein Sci 9 (7), 1382-1390 (2000)
   PUBMED   10933504
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014544.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02494.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2411
                     /organism="Paenibacillus sp. FSL R7-269"
                     /db_xref="taxon:1226755"
     Protein         1..2411
                     /product="HYR domain-containing protein"
                     /calculated_mol_wt=252303
     Region          <737..1078
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
     Region          813..887
                     /region_name="HYR"
                     /note="HYR domain; pfam02494"
                     /db_xref="CDD:460572"
     Region          <1265..1530
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
     Region          2179..2254
                     /region_name="HYR"
                     /note="HYR domain; pfam02494"
                     /db_xref="CDD:460572"
     Region          2260..2347
                     /region_name="CBM_3"
                     /note="Cellulose binding domain; pfam00942"
                     /db_xref="CDD:425958"
ORIGIN      
        1 mqqgrlgiis rwlclsllil mlapgavfgs gkivhnilpg peadtasaav yeaeppipqp
       61 qlhrgvtvkd svyssvyqsv yeidptlgvi lnhgayqmsl malsnvegsm spvspllqqi
      121 rlsqasgvvp ggrgfmlpqv vavkdlagnp lpgipvtftv sedstitavm rglnstgitv
      181 vsdangyasa annytgyige gyqvyskgtg viktmevkaa vpglqpvtfk vevgavgsnl
      241 idttppsika tavtdngtpy iagtwtsqsv ivhytaedtl saiksltpdq kftaegagqt
      301 atgkavdsaa tsdedknhys iatfgpihid ksapvtevav tgaesgswsr gkvalhftad
      361 dpysgvdavy yklgenaavr tsgssaalel eqegattvsy wavdrtgnae aprtvvvqid
      421 ksgpliasil speanekgwn stdvtvsita sdvhsgvkei hyrlgadgev qiaagstaaf
      481 dvsvegiipl efwavdhagn ltaiqktevk idktvpvitv paniimeaka vrtpadigka
      541 svrdisiadi lltndapady pigtttvkwt avdpvgltss qvqritvkdt tkpvltvqgd
      601 mvveatavkt plvvtgasat difpvivvsd apkefpigpt tvtwtatdan snvttatqkv
      661 tvvdrtkpll tvpaditkea vgrrtvadpg kaaatdifkv nvtnnapedy pvgvtkvswt
      721 akdengnist adqliritdt tkpvltipkd itveatarrt kvnigqaeas dlfdvlltkd
      781 apadypvgvt mvtwtatdeh gnvtekvqki tvtdttppql tvpgditaea tgiktpvelg
      841 easakdifsv tvtnnaperf ifgttvvtwt atdengnttk ttqtvkivdt tkplvtlpgg
      901 itaeatgakt kvdigqpvvt eifavtiknd apaefplgtt kvtwtitdeh gnatkgtqev
      961 kivdttkpvi tapedltvea tavrskvalg epvvfdlfet eiindapadf pvgttlvtwm
     1021 asdpsgnvai akqkvtvvdt tapklsvpad vkaeatgirt pvvtgeatat difpvtitsn
     1081 apenyavgvt eviwtakdan glvtsgkqkv tvvdttlpil tvpqdisvea tavntpvqig
     1141 katatdlfpv tvvsnapasy plgktivtwk atdangnfst gtqtitvkdt tapvitdipd
     1201 yiaeatgqtm qiklpvpavt difgiaavss napasyplgv tevtwtakdv ngnvsmrkqk
     1261 vtildttkpv ltvpedinve aaavetpvei geatatdifk vtvknnapea yplgvteviw
     1321 tatdangnvt tkvqkikvvd ttnptltvpe dltveaaave tpveigqasa tdifkvtvkn
     1381 napeayplgv teviwtatda ngnvttkvqk ikvmdttkpv lavpeditve aaavetpvei
     1441 geatatdifk vtvknnapea yplgvtevvw tatdangnvt tkvqkikvvd ttkpaltvpe
     1501 drsveatave tpveigqasa tdifkvtvkn napeayplgv tevvwtatda ngnvttkvqk
     1561 ikvvdttkpv lavpedlsve atavktpvei gvakatdifk vtvtsdapaa yplgtttvtw
     1621 kakdingnev tgvqritvvd ttqpllkfeg plqltkeata letpvelevp avldffpvtl
     1681 ttdapgehga itseesltas fpigttivkw taidssgnsa vgivkvtivd tvkpalklpa
     1741 ditleasalk tpveigvata tdifkvtvts napesyglgv tevvwtatda ngnvstgvqk
     1801 itvvdttkpv lklpadktve atalktpvet gvatgtdifk vtvtsnapes yalgttevtw
     1861 tatdangnvs tgvqkitvvd ttkpvlklpa dktveatalk tpveigvatg tdifkvtvts
     1921 napesyglgv tevvwtatda ngnvstgvqk itvvdttkpv lklpadktve atalktpvei
     1981 gvatgtdifk vtvtsnapes yglgvtevvw tatdangnvs tgvqkitlvd ttkpvlklpa
     2041 dktveatalk tpveigvatg tdifkvtvis napesyalgi tevtwtatda ngnvstgvqk
     2101 itvvdttkpv lklpadktve atalktpvei gvatgtdifk vtvisnapes yalgitevtw
     2161 tatdangnvs tgvqkitvvd ttkpvlkapa dvavpatgtk tlvnlgqata sdifgvvlkn
     2221 dapadgfplg ktvvtwtatd vngnvstavq nvtvtqtfkv qsfnasrssv tntifprisf
     2281 entskstlql ssiklryyyt idgeryqsfy tdyarvsgsn trviqsyvtg sfqkttgktg
     2341 sdyyleigft sgagslkpge sveiqcrfwk sdfsnyyqtn dysfnglatg ftdtskitay
     2401 sygnliagme p
//
LOCUS       WP_235218607              85 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: Imm3 family immunity protein [unclassified
            Paenibacillus].
ACCESSION   WP_235218607
VERSION     WP_235218607.1
KEYWORDS    RefSeq.
SOURCE      unclassified Paenibacillus
  ORGANISM  unclassified Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 85)
  AUTHORS   Iyer,L.M., Zhang,D., Rogozin,I.B. and Aravind,L.
  TITLE     Evolution of the deaminase fold and multiple origins of eukaryotic
            editing and mutagenic nucleic acid deaminases from bacterial toxin
            systems
  JOURNAL   Nucleic Acids Res 39 (22), 9473-9497 (2011)
   PUBMED   21890906
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025781.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14425.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="unclassified Paenibacillus"
                     /db_xref="taxon:185978"
     Protein         1..85
                     /product="Imm3 family immunity protein"
                     /calculated_mol_wt=9801
     Region          <1..58
                     /region_name="Imm3"
                     /note="Immunity protein Imm3; pfam14425"
                     /db_xref="CDD:373060"
ORIGIN      
        1 mekavlmvis aelkvkqpri ykntkenyir dlesidfhkl kdfilkgqln ekeheelyli
       61 ggetsiartr knasrslpks kmvlq
//
LOCUS       WP_235218559             327 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: adenosylcobinamide amidohydrolase [unclassified
            Paenibacillus].
ACCESSION   WP_235218559
VERSION     WP_235218559.1
KEYWORDS    RefSeq.
SOURCE      unclassified Paenibacillus
  ORGANISM  unclassified Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 327)
  AUTHORS   Woodson,J.D. and Escalante-Semerena,J.C.
  TITLE     CbiZ, an amidohydrolase enzyme required for salvaging the coenzyme
            B12 precursor cobinamide in archaea
  JOURNAL   Proc Natl Acad Sci U S A 101 (10), 3591-3596 (2004)
   PUBMED   14990804
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014060.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01955.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="unclassified Paenibacillus"
                     /db_xref="taxon:185978"
     Protein         1..327
                     /product="adenosylcobinamide amidohydrolase"
                     /calculated_mol_wt=33616
     Region          24..245
                     /region_name="CbiZ"
                     /note="Adenosylcobinamide amidohydrolase [Coenzyme
                     transport and metabolism]; COG1865"
                     /db_xref="CDD:441470"
ORIGIN      
        1 mdeievslpf nledgvktyq skvwpgvale wreghlllef paeadsissa vygggagrlk
       61 ravnqyvsrd yecsnpvqdl enklqewgyp legcaglmta vplehaavae edtgsagifc
      121 cvtaaagnaa ragsqrsvla ayrpgtinim igidgwlsqs amvnavmtat eakaaaladl
      181 gitdsengli atgtttdaiv lavsgsrrya aehvyagtat dlggaigrlv ystvteslrs
      241 vkaaksvssa qaealqaahg gdagasqaar rvdaeasqav rgvdaealqa vhgvhaeelq
      301 alqgvdaaap qaphslpprv sqsggre
//
LOCUS       WP_235218527              81 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF134 domain-containing protein [Paenibacillus sp. FSL R7-269].
ACCESSION   WP_235218527
VERSION     WP_235218527.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL R7-269
  ORGANISM  Paenibacillus sp. FSL R7-269
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 81)
  AUTHORS   Brazda,V., Luo,Y., Bartas,M., Kaura,P., Porubiakova,O., Stastny,J.,
            Pecinka,P., Verga,D., Da Cunha,V., Takahashi,T.S., Forterre,P.,
            Myllykallio,H., Fojta,M. and Mergny,J.L.
  TITLE     G-Quadruplexes in the Archaea Domain
  JOURNAL   Biomolecules 10 (9), 1349 (2020)
   PUBMED   32967357
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014101.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02001.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Paenibacillus sp. FSL R7-269"
                     /db_xref="taxon:1226755"
     Protein         1..81
                     /product="DUF134 domain-containing protein"
                     /calculated_mol_wt=8638
     Region          <9..55
                     /region_name="HTH_XRE"
                     /note="Helix-turn-helix XRE-family like proteins.
                     Prokaryotic DNA binding proteins belonging to the
                     xenobiotic response element family of transcriptional
                     regulators; cl22854"
                     /db_xref="CDD:473980"
ORIGIN      
        1 mhsainsael sprqaealaw vsgadmtqkd aasimgitqq aaaklygeaa dkiaavykrw
       61 eygeitvsyd ldeetteeea a
//
LOCUS       WP_235219138             238 aa            linear   BCT 02-MAR-2025
DEFINITION  winged helix-turn-helix domain-containing protein [Sphingobium sp.
            C100].
ACCESSION   WP_235219138
VERSION     WP_235219138.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium sp. C100
  ORGANISM  Sphingobium sp. C100
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (residues 1 to 238)
  AUTHORS   Wietzorrek,A. and Bibb,M.
  TITLE     A novel family of proteins that regulates antibiotic production in
            streptomycetes appears to contain an OmpR-like DNA-binding fold
  JOURNAL   Mol Microbiol 25 (6), 1181-1184 (1997)
   PUBMED   9350875
REFERENCE   2  (residues 1 to 238)
  AUTHORS   Martinez-Hackert,E. and Stock,A.M.
  TITLE     The DNA-binding domain of OmpR: crystal structures of a winged
            helix transcription factor
  JOURNAL   Structure 5 (1), 109-124 (1997)
   PUBMED   9016718
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012698.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00486.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Sphingobium sp. C100"
                     /db_xref="taxon:1207055"
     Protein         1..238
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=26469
     Region          4..233
                     /region_name="ompR"
                     /note="osmolarity response regulator; Provisional;
                     PRK09468"
                     /db_xref="CDD:181883"
ORIGIN      
        1 matmialhrr llivdddaal tarladqfsa ygyaadgaat paemrimltr rdyalvvldp
       61 lvqpsdaagl lreligdhrl pvilhstacq eaeriaalef gvedclrkpa hprellarir
      121 aalrgrvqer qsasptirfa gwrvdletgq lfddagrsvp lsegefqllr vfvehprqvl
      181 drshlldqvy gdasehfdrs idvqlcrlrr klsagglkgp virtirnegy mfvhavtn
//
LOCUS       WP_235219209             163 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6378 domain-containing protein [Escherichia coli].
ACCESSION   WP_235219209
VERSION     WP_235219209.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040395.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19905.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..163
                     /product="DUF6378 domain-containing protein"
                     /calculated_mol_wt=17634
     Region          6..90
                     /region_name="DUF6378"
                     /note="Domain of unknown function (DUF6378); pfam19905"
                     /db_xref="CDD:466228"
ORIGIN      
        1 mtkaadllrl aaetieqrgk qngydkkeek sapkiatiyn akkgadltpl dvcdlliclk
       61 earleailsn gtdptdtlvd lisysalkae qilteregeq rkkkavfdmp lncgcknasi
      121 pgdliasskv tlngvlsnrl dvkcdnesll raagfhknek gdd
//
LOCUS       WP_235219213             142 aa            linear   BCT 02-MAR-2025
DEFINITION  RusA family crossover junction endodeoxyribonuclease [Escherichia
            coli].
ACCESSION   WP_235219213
VERSION     WP_235219213.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 142)
  AUTHORS   Mahdi,A.A., Sharples,G.J., Mandal,T.N. and Lloyd,R.G.
  TITLE     Holliday junction resolvases encoded by homologous rusA genes in
            Escherichia coli K-12 and phage 82
  JOURNAL   J Mol Biol 257 (3), 561-573 (1996)
   PUBMED   8648624
REFERENCE   2  (residues 1 to 142)
  AUTHORS   Sharples,G.J., Chan,S.N., Mahdi,A.A., Whitby,M.C. and Lloyd,R.G.
  TITLE     Processing of intermediates in recombination and DNA repair:
            identification of a new endonuclease that specifically cleaves
            Holliday junctions
  JOURNAL   EMBO J 13 (24), 6133-6142 (1994)
   PUBMED   7813450
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017663.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05866.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..142
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /EC_number="3.1.21.10"
                     /GO_function="GO:0000287 - magnesium ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006281 - DNA repair [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /calculated_mol_wt=16477
     Region          1..119
                     /region_name="RusA"
                     /note="Endodeoxyribonuclease RusA; cl01885"
                     /db_xref="CDD:470382"
ORIGIN      
        1 mneytfslpy ppsnnryyrh srgfhyiskv gkeyreqvrd iiellnlnin lscrlaiiiy
       61 aappdnrtrd ldnipkclfd sltyagfwkd dgqidaikiv rcrkvkggrl fikvrergdl
      121 lpdideyatn mwgdngtnkh cc
//
LOCUS       WP_235219232              66 aa            linear   BCT 02-MAR-2025
DEFINITION  holin [Escherichia coli].
ACCESSION   WP_235219232
VERSION     WP_235219232.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027408.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16082.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..66
                     /product="holin"
                     /calculated_mol_wt=7176
     Region          3..58
                     /region_name="Phage_holin_2_1"
                     /note="Bacteriophage P21 holin S; cl04868"
                     /db_xref="CDD:446536"
ORIGIN      
        1 mldkireaca yvtgavtaff gaitindiav fvgilstigt favnyyfksq enkraqeehd
       61 armgnk
//
LOCUS       WP_235219237             457 aa            linear   BCT 02-MAR-2025
DEFINITION  anti-CBASS protein Acb1 family protein [Escherichia coli].
ACCESSION   WP_235219237
VERSION     WP_235219237.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 457)
  AUTHORS   Rumnieks,J., Fuzik,T. and Tars,K.
  TITLE     Structure of the Borrelia Bacteriophage phiBB1 Procapsid
  JOURNAL   J Mol Biol 435 (24), 168323 (2023)
   PUBMED   37866476
REFERENCE   2  (residues 1 to 457)
  AUTHORS   Li,F., Hou,C.D., Lokareddy,R.K., Yang,R., Forti,F., Briani,F. and
            Cingolani,G.
  TITLE     High-resolution cryo-EM structure of the Pseudomonas bacteriophage
            E217
  JOURNAL   Nat Commun 14 (1), 4052 (2023)
   PUBMED   37422479
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 457)
  AUTHORS   Yang,F., Jiang,Y.L., Zhang,J.T., Zhu,J., Du,K., Yu,R.C., Wei,Z.L.,
            Kong,W.W., Cui,N., Li,W.F., Chen,Y., Li,Q. and Zhou,C.Z.
  TITLE     Fine structure and assembly pattern of a minimal myophage Pam3
  JOURNAL   Proc Natl Acad Sci U S A 120 (4), e2213727120 (2023)
   PUBMED   36656854
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018125.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06381.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..457
                     /product="anti-CBASS protein Acb1 family protein"
                     /calculated_mol_wt=51259
     Region          31..426
                     /region_name="DUF1073"
                     /note="Protein of unknown function (DUF1073); cl21602"
                     /db_xref="CDD:473921"
ORIGIN      
        1 mpsnlelavn aalsqrqaaf aryaaanpft mgidakrnaa wseygfkeel tytdlyklyr
       61 rggiahgaie kiittcwrds pvliegtede kaetetpwer eikkqfdnrf wrviaecdrr
      121 rlvgryagll ihvkdnqpwd rpvtkgvgia kftpvwagal tpkdfdenpd sdnyglptww
      181 eykerinskt iarkihpdri fifgdysdda iaflepsyna fvslekvegg sgesflknaa
      241 rqlaisfdke idfrslaaty dcdvtelrek fneaaaemnk gndvmmalqg atvsplvtav
      301 sdpsatydvn lqtaaagidi ptrilvgnqq gerastedlr yfnnrcmtrr qeiggeleel
      361 frkladlrlt seprdisvlw ddlnamtkae lleaahkmaq inqaclatge eifsgdeire
      421 aagydgpase veledeendd egeennqent alrdnai
//
LOCUS       WP_235219301             102 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1737 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235219301
VERSION     WP_235219301.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08410.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>102
                     /product="DUF1737 domain-containing protein"
     Region          5..50
                     /region_name="DUF1737"
                     /note="Domain of unknown function (DUF1737); cl10503"
                     /db_xref="CDD:471980"
ORIGIN      
        1 mafkhydvvr aaspsdlaer ltqklkegwq pfgspvaitp ytlmqaiaae gdvttpvavt
       61 gnegkavavs atsdpeyyfv vvlagqsngm sygeglplpe ty
//
LOCUS       WP_235219308              83 aa            linear   BCT 02-MAR-2025
DEFINITION  porin, partial [Escherichia coli].
ACCESSION   WP_235219308
VERSION     WP_235219308.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012489.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00267.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>83
                     /product="porin"
                     /GO_component="GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /GO_process="GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
     Region          1..>83
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mkkltvaisa vaasvlmams aqaaeiynkd snkldlygkv nakhyfssnd addgdttyvr
       61 lgfkgetqin dqltgfgqwe yef
//
LOCUS       WP_235219338             110 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein, partial [Escherichia coli].
ACCESSION   WP_235219338
VERSION     WP_235219338.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06763.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>110
                     /product="phage tail protein"
     Region          3..>110
                     /region_name="Minor_tail_Z"
                     /note="Prophage minor tail protein Z (GPZ); pfam06763"
                     /db_xref="CDD:284235"
ORIGIN      
        1 maikgleqav enlsriskta vpgaaamain rvassaisqs asqvaretkv rrklvkerar
       61 lkratvknpq arirvnrgdl pviklgnarv vlsrrrrrkk gqrsslkggg
//
LOCUS       WP_235219341              36 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1378 family protein, partial [Escherichia coli].
ACCESSION   WP_235219341
VERSION     WP_235219341.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 36)
  AUTHORS   Rigden,D.J.
  TITLE     Ab initio modeling led annotation suggests nucleic acid binding
            function for many DUFs
  JOURNAL   OMICS 15 (7-8), 431-438 (2011)
   PUBMED   21348639
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07125.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..36
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>36
                     /product="DUF1378 family protein"
     Region          1..>36
                     /region_name="DUF1378"
                     /note="Protein of unknown function (DUF1378); pfam07125"
                     /db_xref="CDD:115758"
ORIGIN      
        1 mtfihqvmly fctavcvlyl lsggyramrd fwrrqi
//
LOCUS       WP_235219342              36 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1378 family protein, partial [Escherichia coli].
ACCESSION   WP_235219342
VERSION     WP_235219342.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 36)
  AUTHORS   Rigden,D.J.
  TITLE     Ab initio modeling led annotation suggests nucleic acid binding
            function for many DUFs
  JOURNAL   OMICS 15 (7-8), 431-438 (2011)
   PUBMED   21348639
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07125.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..36
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>36
                     /product="DUF1378 family protein"
     Region          1..>36
                     /region_name="DUF1378"
                     /note="Protein of unknown function (DUF1378); pfam07125"
                     /db_xref="CDD:115758"
ORIGIN      
        1 mtflnqlmly fctvvcvlyl lsggyramrd fwrrqi
//
LOCUS       WP_235219343             243 aa            linear   BCT 02-MAR-2025
DEFINITION  pyridoxal-dependent decarboxylase, partial [Escherichia coli].
ACCESSION   WP_235219343
VERSION     WP_235219343.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 243)
  AUTHORS   Viguera,E., Trelles,O., Urdiales,J.L., Mates,J.M. and
            Sanchez-Jimenez,F.
  TITLE     Mammalian L-amino acid decarboxylases producing 1,4-diamines:
            analogies among differences
  JOURNAL   Trends Biochem Sci 19 (8), 318-319 (1994)
   PUBMED   7940675
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012503.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00282.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>243
                     /product="pyridoxal-dependent decarboxylase"
                     /GO_function="GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA]"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0019752 - carboxylic acid metabolic
                     process [Evidence IEA]"
     Region          <1..228
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            55
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99743"
ORIGIN      
        1 plhdaldkfq adtgididmh idaasggfla pfvapdivwd frlprvksis asghkfglap
       61 lgcgwviwrd eealpqelvf nvdylggqig tfainfsrpa gqviaqyyef lrlgregytk
      121 vqnasyqvaa yladeiaklg pyefictgrp degipavcfk lkdgedpgyt lydlserlrl
      181 rgwqvpaftl ggeatdivvm rimcrrgfem dfaellledy kaslkylsdh pklqgiaqqn
      241 sfk
//
LOCUS       WP_235219360             103 aa            linear   BCT 02-MAR-2025
DEFINITION  prophage tail fiber N-terminal domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_235219360
VERSION     WP_235219360.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019996.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08400.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>103
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
     Region          <1..58
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
ORIGIN      
        1 fppshagtit vyedsrpgtl ndflgamted darpealrrf elmveevarn asavaqntaa
       61 akksasdast sareaathat daagsaraas tsagqaassa qsa
//
LOCUS       WP_235219417             384 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DnaB-like helicase C-terminal domain-containing
            protein [Paenibacillus].
ACCESSION   WP_235219417
VERSION     WP_235219417.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus
  ORGANISM  Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae.
REFERENCE   1  (residues 1 to 384)
  AUTHORS   Leipe,D.D., Aravind,L., Grishin,N.V. and Koonin,E.V.
  TITLE     The bacterial replicative helicase DnaB evolved from a RecA
            duplication
  JOURNAL   Genome Res 10 (1), 5-16 (2000)
   PUBMED   10645945
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015736.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03796.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Paenibacillus"
                     /db_xref="taxon:44249"
     Protein         1..384
                     /product="DnaB-like helicase C-terminal domain-containing
                     protein"
                     /GO_function="GO:0003678 - DNA helicase activity [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /calculated_mol_wt=42389
     Region          98..368
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            order(126..128,148,150..151,252..253)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410865"
ORIGIN      
        1 mcayipgvtd sfdylarelk daagkratak llsdpnmqrd fdtktteefv asltkqleri
       61 kletrtnirt ftdvssetdk flaeyrarka gtsfriwrsk fasindqigg yfsgntyawy
      121 arsgrgksvl vmedgaieaa fqgatvlvwa lemsefewma rayssisarl glvnanidgv
      181 dyaagfenka llmgrltdef etefetflrt lnelipgrii lraadsegft ergitqlead
      241 ireteadvvv vdpiylmdye antsrvaggd vaatsvkikr lagqtktvih ivtqadedas
      301 eknedgtrel rppkraeikk skailedaan ifgidtlahe grgvielgkg rnggedtrve
      361 ivylpnwgiv qetdlageaa hfva
//
LOCUS       WP_235219485             124 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DJ-1/PfpI family protein [Paenibacillus].
ACCESSION   WP_235219485
VERSION     WP_235219485.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus
  ORGANISM  Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae.
REFERENCE   1  (residues 1 to 124)
  AUTHORS   Ohnishi,Y., Yamazaki,H., Kato,J.Y., Tomono,A. and Horinouchi,S.
  TITLE     AdpA, a central transcriptional regulator in the A-factor
            regulatory cascade that leads to morphological development and
            secondary metabolism in Streptomyces griseus
  JOURNAL   Biosci Biotechnol Biochem 69 (3), 431-439 (2005)
   PUBMED   15784968
REFERENCE   2  (residues 1 to 124)
  AUTHORS   Halio,S.B., Blumentals,I.I., Short,S.A., Merrill,B.M. and
            Kelly,R.M.
  TITLE     Sequence, expression in Escherichia coli, and analysis of the gene
            encoding a novel intracellular protease (PfpI) from the
            hyperthermophilic archaeon Pyrococcus furiosus
  JOURNAL   J Bacteriol 178 (9), 2605-2612 (1996)
   PUBMED   8626329
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01965.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Paenibacillus"
                     /db_xref="taxon:44249"
     Protein         1..124
                     /product="DJ-1/PfpI family protein"
                     /calculated_mol_wt=13631
     Region          <1..103
                     /region_name="GAT_1"
                     /note="Type 1 glutamine amidotransferase (GATase1)-like
                     domain; cl00020"
                     /db_xref="CDD:469582"
     Site            34
                     /site_type="active"
                     /note="conserved cys residue [active]"
                     /db_xref="CDD:153222"
ORIGIN      
        1 mliliggtgw kdnsaitpvi ekclqesvpi aaicdattfl aehgyldnip htgnsldylk
       61 qnapnykgda nyiekqavss ehiitangta alefarevmk klegfpietv egwynffkdg
      121 fyqe
//
LOCUS       WP_235219508             127 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: plasmid mobilization protein [Paenibacillus].
ACCESSION   WP_235219508
VERSION     WP_235219508.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus
  ORGANISM  Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae.
REFERENCE   1  (residues 1 to 127)
  AUTHORS   Rehman,S., Li,Y.G., Schmitt,A., Lassinantti,L., Christie,P.J. and
            Berntsson,R.P.
  TITLE     Enterococcal PcfF Is a Ribbon-Helix-Helix Protein That Recruits the
            Relaxase PcfG Through Binding and Bending of the oriT Sequence
  JOURNAL   Front Microbiol 10, 958 (2019)
   PUBMED   31134011
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046164.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21983.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Paenibacillus"
                     /db_xref="taxon:44249"
     Protein         1..127
                     /product="plasmid mobilization protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=14065
     Region          63..109
                     /region_name="MobC"
                     /note="Bacterial mobilization protein (MobC); pfam05713"
                     /db_xref="CDD:428600"
ORIGIN      
        1 mkkevkmmrr rairiqawvn ndenarlqas akksglsqeg yirslingyv pkampppdyf
       61 amlrelhaig nnlnqlaaka hatghldqaa fqqeadhlrr avqliqqavt apeprteppg
      121 npnahpl
//
LOCUS       WP_235219610              50 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Streptococcus mitis].
ACCESSION   WP_235219610
VERSION     WP_235219610.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus mitis
  ORGANISM  Streptococcus mitis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus; Streptococcus mitis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024835.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13443.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..50
                     /organism="Streptococcus mitis"
                     /db_xref="taxon:28037"
     Protein         1..50
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=5718
     Region          <2..45
                     /region_name="HTH_XRE"
                     /note="Helix-turn-helix XRE-family like proteins.
                     Prokaryotic DNA binding proteins belonging to the
                     xenobiotic response element family of transcriptional
                     regulators; cl22854"
                     /db_xref="CDD:473980"
ORIGIN      
        1 myrlakesnv hhsnfsnlka grlkemswtn ickvadvlev sldeirkeke
//
LOCUS       WP_235219546             232 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GyrI-like domain-containing protein [Paenibacillus].
ACCESSION   WP_235219546
VERSION     WP_235219546.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus
  ORGANISM  Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae.
REFERENCE   1  (residues 1 to 232)
  AUTHORS   Anantharaman,V. and Aravind,L.
  TITLE     The SHS2 module is a common structural theme in functionally
            diverse protein groups, like Rpb7p, FtsA, GyrI, and MTH1598/TM1083
            superfamilies
  JOURNAL   Proteins 56 (4), 795-807 (2004)
   PUBMED   15281131
REFERENCE   2  (residues 1 to 232)
  AUTHORS   Romanowski,M.J., Gibney,S.A. and Burley,S.K.
  TITLE     Crystal structure of the Escherichia coli SbmC protein that
            protects cells from the DNA replication inhibitor microcin B17
  JOURNAL   Proteins 47 (3), 403-407 (2002)
   PUBMED   11948793
REFERENCE   3  (residues 1 to 232)
  AUTHORS   Kwon,H.J., Bennik,M.H., Demple,B. and Ellenberger,T.
  TITLE     Crystal structure of the Escherichia coli Rob transcription factor
            in complex with DNA
  JOURNAL   Nat Struct Biol 7 (5), 424-430 (2000)
   PUBMED   10802742
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018184.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06445.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Paenibacillus"
                     /db_xref="taxon:44249"
     Protein         1..232
                     /product="GyrI-like domain-containing protein"
                     /calculated_mol_wt=27483
     Region          27..232
                     /region_name="MA1133"
                     /note="Cyclopropanoid cyclopropyl hydrolase, GyrI-like
                     domain [Defense mechanisms, Signal transduction
                     mechanisms]; COG4832"
                     /db_xref="CDD:443860"
ORIGIN      
        1 mkpnmthrrh vryariqkki ggskmpkhey rkhekelyqp kakpqllevg kqkficikgk
       61 gnpnhedfle rvgvlyslsy avkmmpkngf tpegyfdytv ypleglwdlt eegrnhkdli
      121 kdellytimi rqpdfvtret verafeivnk kkphpllkea yfdeledgls vqilhigsyd
      181 sepesfqqlk mfidennyvl ktlvhreiyl sdarkvehdk lktilryrin kk
//
LOCUS       WP_235219363              86 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA-packaging protein FI, partial [Escherichia coli].
ACCESSION   WP_235219363
VERSION     WP_235219363.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 86)
  AUTHORS   Smith,M.P. and Feiss,M.
  TITLE     Sites and gene products involved in lambdoid phage DNA packaging
  JOURNAL   J Bacteriol 175 (8), 2393-2399 (1993)
   PUBMED   8468297
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025366.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14000.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     gene            <1..86
                     /gene="gpFI"
     Protein         <1..86
                     /product="DNA-packaging protein FI"
     Region          <1..83
                     /region_name="Packaging_FI"
                     /note="DNA packaging protein FI; pfam14000"
                     /db_xref="CDD:290707"
ORIGIN      
        1 daagqdtsvs penaltghen evvsaqpdtv idtadlvtvv alvtlhtdal hatrdeavaf
       61 vlpgtafrvs agvaaemter glarmq
//
LOCUS       WP_235219634             106 aa            linear   BCT 02-MAR-2025
DEFINITION  MarR family transcriptional regulator [Streptococcus mitis].
ACCESSION   WP_235219634
VERSION     WP_235219634.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus mitis
  ORGANISM  Streptococcus mitis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus; Streptococcus mitis group.
REFERENCE   1  (residues 1 to 106)
  AUTHORS   Alekshun,M.N., Levy,S.B., Mealy,T.R., Seaton,B.A. and Head,J.F.
  TITLE     The crystal structure of MarR, a regulator of multiple antibiotic
            resistance, at 2.3 A resolution
  JOURNAL   Nat Struct Biol 8 (8), 710-714 (2001)
   PUBMED   11473263
REFERENCE   2  (residues 1 to 106)
  AUTHORS   Sulavik,M.C., Dazer,M. and Miller,P.F.
  TITLE     The Salmonella typhimurium mar locus: molecular and genetic
            analyses and assessment of its role in virulence
  JOURNAL   J Bacteriol 179 (6), 1857-1866 (1997)
   PUBMED   9068629
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013231.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01047.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Streptococcus mitis"
                     /db_xref="taxon:28037"
     Protein         1..106
                     /product="MarR family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=12305
     Region          1..87
                     /region_name="HTH_ARSR"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; cl46857"
                     /db_xref="CDD:481197"
ORIGIN      
        1 migenqplnl vklsellevs rsaitqsvrr liqknlvvfd fdpnngknky lrlsekgiei
       61 fkihkeqqey ieksifsvln nysevelktv vklmddiekv wgelpw
//
LOCUS       WP_235219697             640 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Neisseria
            gonorrhoeae].
ACCESSION   WP_235219697
VERSION     WP_235219697.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 640)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 640)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 640)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 640)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..640
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=71672
     Region          1..636
                     /region_name="PRK10636"
                     /note="putative ABC transporter ATP-binding protein;
                     Provisional"
                     /db_xref="CDD:236729"
ORIGIN      
        1 mieiknltlq rglkvlldka saavnpgqrv gligkngtgk sslfalikge itqdggdisi
       61 pknwrlasvs qetpdldisa ldyvlqgdae lqafqtalrq aevqndgmkq aeyhakleei
      121 daytaparaa kllnglgfsq eehsrpvksf sggwrmrlnl aqalicradl llldeptnhl
      181 dletvlwlen hlaslpctqi iishdrdfln aattqtiels qqkltqysgn ydfyqteraq
      241 rlaqqqaayv kqqaqikhlq sfidrfkaka tkavqaqsrm kalakleria pahldsefsf
      301 efynpdhlpn pllklehadl gyegktvlhd itlslesgar ygllgvngsg kstfikalag
      361 kidllsgsiv hseklnigyf aqhqldtira dqspvwhiqq lspevreqei rnflggfdfv
      421 gdmalqktep fsggekarla lamiiwqkpn lllldeptnh ldldmrhalt lalqsfqgal
      481 ivvshdrsll eattdsflli dkgrlknfdg dlndyrqwrl aqenaatapa astqsqnrkd
      541 tkrieaqirq ekaqrskpiq qkidkaekem vqlseiqtgc eafltqeday leankeklqn
      601 tlselakvkt qlaqieetwl acqeelerie teiekqfaer
//
LOCUS       WP_235219723             231 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235219723
VERSION     WP_235219723.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 231)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 231)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..231
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=25822
     Region          49..231
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaye hitrdypdaa glekgkkist vsdyfrnirt hsihprvsvg ydfggwriaa
       61 dyaryrkwnn nkysvsikel lrndnsggql nikhqktehq engtfhaass lglstiydfd
      121 tgsrfkpyig arvayghvrh qvrsvqqetv avttyphsgk psvlanapip qpayhesrsi
      181 sslgfgamag vgidvapglt ldagyryhnw grlentrfkt heaslgvryr f
//
LOCUS       WP_235219739             529 aa            linear   BCT 02-MAR-2025
DEFINITION  IgG-binding virulence factor TspB family protein [Neisseria
            gonorrhoeae].
ACCESSION   WP_235219739
VERSION     WP_235219739.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 529)
  AUTHORS   Muller,M.G., Moe,N.E., Richards,P.Q. and Moe,G.R.
  TITLE     Resistance of Neisseria meningitidis to human serum depends on T
            and B cell stimulating protein B
  JOURNAL   Infect Immun 83 (4), 1257-1264 (2015)
   PUBMED   25583528
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05616.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..529
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /calculated_mol_wt=58877
     Region          46..521
                     /region_name="Neisseria_TspB"
                     /note="Neisseria meningitidis TspB protein; pfam05616"
                     /db_xref="CDD:283306"
ORIGIN      
        1 mnsfikstpi vlililcssn sysepvrlek sqikfqssnn lksigfklds ssnsfskfte
       61 aanfehiptg akarinakit asvsragvls gvgklvrqga kfgtravpyv gtallahdvy
      121 qtfkediqar gcrydpetdk fvkgyeyanc lwyederrin rtygcygvds simrlmpdrs
      181 rfpevkqlme sqmeriarpf wdkrkeeipk dtalkwrlfp fshceffwng ggcfvrngdn
      241 lihrvyfklg rnpkykeemd akkpeeilsl kvdadpdkyi katgypgyse kvevapgtkv
      301 nmgpvtdrng npvqvaatfg rdaqgnttad vqviprpdlt pgsseaphaq pppevspaen
      361 pannpdpden pgtrpnpepd pdlnpdanpd tdgqpgtspd spavpdrpng rhrkerkege
      421 dgglscdyfp eilacqemgk psdrmfhdis ipqvtddktw sshnflpsng vcpqpktfhv
      481 fgrqyrasye plcvfaekir favllafiim safvvfgslg gnkchylpa
//
LOCUS       WP_235219743             270 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235219743
VERSION     WP_235219743.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 270)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 270)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..270
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=30570
     Region          94..270
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mnparkkllf ssllfssllf ssllfssllf ssaaqaaseg ngrgpyvqad layayehith
       61 dypepaapnk nkistvsdyf rnirthsihp rvsvgydfgg wriaadyary rkwnnnkysv
      121 niekvqeihk nridrktenq engtfhavss lglsavydfk lndkfkpyig arvayghvrh
      181 sidstkktae sltsfhgvtp tpyspqektr styresdsir rvglgviagi gfditpkltl
      241 dtgyryhnwg rlentrfkth easlgvryrf
//
LOCUS       WP_235219757             156 aa            linear   BCT 02-MAR-2025
DEFINITION  PilX family type IV pilin [Neisseria gonorrhoeae].
ACCESSION   WP_235219757
VERSION     WP_235219757.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Helaine,S., Dyer,D.H., Nassif,X., Pelicic,V. and Forest,K.T.
  TITLE     3D structure/function analysis of PilX reveals how minor pilins can
            modulate the virulence properties of type IV pili
  JOURNAL   Proc Natl Acad Sci U S A 104 (40), 15888-15893 (2007)
   PUBMED   17893339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022965.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11530.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..156
                     /product="PilX family type IV pilin"
                     /calculated_mol_wt=17208
     Region          1..>35
                     /region_name="PRK10574"
                     /note="putative major pilin subunit; Provisional"
                     /db_xref="CDD:236718"
     Region          31..156
                     /region_name="Pilin_PilX"
                     /note="Minor type IV pilin, PilX; pfam11530"
                     /db_xref="CDD:288394"
ORIGIN      
        1 meqkgftlie mmivvailgi isviaipsyq syiekgyqsq lytemvginn vlkqfilknp
       61 qddndilksk leifvsgykm npkiakkysv svsvdaekpr ayrlvgvpna gtgytlsvwm
      121 nsvgdgykcr datsaqvyle tlsantgcea fsnrkk
//
LOCUS       WP_235219823              22 aa            linear   BCT 02-MAR-2025
DEFINITION  M15 family metallopeptidase, partial [Escherichia coli].
ACCESSION   WP_235219823
VERSION     WP_235219823.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024929.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13539.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..22
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..22
                     /product="M15 family metallopeptidase"
                     /GO_function="GO:0008233 - peptidase activity [Evidence
                     IEA]"
     Region          <3..21
                     /region_name="Peptidase_M15"
                     /note="Metalloproteases including zinc D-Ala-D-Ala
                     carboxypeptidase, L-Ala-D-Glu peptidase,
                     L,D-carboxypeptidase, bacteriophage endolysins, and
                     related proteins; cl38918"
                     /db_xref="CDD:453889"
ORIGIN      
        1 taiewggdwr tlkdgphfql kr
//
LOCUS       WP_235219842             195 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail length tape measure family protein, partial [Escherichia
            coli].
ACCESSION   WP_235219842
VERSION     WP_235219842.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 195)
  AUTHORS   Pedersen,M., Ostergaard,S., Bresciani,J. and Vogensen,F.K.
  TITLE     Mutational analysis of two structural genes of the temperate
            lactococcal bacteriophage TP901-1 involved in tail length
            determination and baseplate assembly
  JOURNAL   Virology 276 (2), 315-328 (2000)
   PUBMED   11040123
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06791.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>195
                     /product="phage tail length tape measure family protein"
     Region          <1..160
                     /region_name="TMP_2"
                     /note="Prophage tail length tape measure protein;
                     pfam06791"
                     /db_xref="CDD:429120"
ORIGIN      
        1 gqvkdsfggm ipmfrglaga itlpmvgats lavatgalay awyqgnstls dfnktlvlsg
       61 nqagltadrm lvlsragqaa gltfnqtses lsalvkagvs geaqiasisq svarfssasg
      121 vevdkvaeaf gklttdptsg ltamarqfhn vtaeqiayva qlqrsgdeag alqaaneaat
      181 kgfddqtrrl kenmg
//
LOCUS       WP_235219858             232 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235219858
VERSION     WP_235219858.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 232)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 232)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..232
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=26031
     Region          49..232
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaae rithdypept gakkdkkist vsdyfrnirt hsvhprvsvg ydfggwriaa
       61 dyaryrkwnd nkysvdikrv kenngsgkkl tqdlktenqe ngtfhavssl glsavydfdt
      121 gsrfkpyagv rvsyghvrhs idstkkttdv itappttsdg apttynanpq tqnpyhqsds
      181 irrvglgvia gvgfditpnl tldagyryhn wgrlentrfk theaslgmry rf
//
LOCUS       WP_235219884             220 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235219884
VERSION     WP_235219884.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 220)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 220)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..220
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=24666
     Region          49..220
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaae rithdypept gakkdkkist vsdyfrnirt hsvhprvsvg ydfgswriaa
       61 dyaryrkwnn skysvsikel knnkkktenq engsfhavss lglsavydfk lndkfkpyig
      121 arvayghvrh sistkkttef lttagrpgvv pggykvsttp gahqesnsir rvglgviagv
      181 gfditpnltl dagyryhnwg rlentrfkth easlgvryrf
//
LOCUS       WP_235219902             393 aa            linear   BCT 02-MAR-2025
DEFINITION  LD-carboxypeptidase [Neisseria gonorrhoeae].
ACCESSION   WP_235219902
VERSION     WP_235219902.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 393)
  AUTHORS   Korza,H.J. and Bochtler,M.
  TITLE     Pseudomonas aeruginosa LD-carboxypeptidase, a serine peptidase with
            a Ser-His-Glu triad and a nucleophilic elbow
  JOURNAL   J Biol Chem 280 (49), 40802-40812 (2005)
   PUBMED   16162494
REFERENCE   2  (residues 1 to 393)
  AUTHORS   Templin,M.F., Ursinus,A. and Holtje,J.V.
  TITLE     A defect in cell wall recycling triggers autolysis during the
            stationary growth phase of Escherichia coli
  JOURNAL   EMBO J 18 (15), 4108-4117 (1999)
   PUBMED   10428950
REFERENCE   3  (residues 1 to 393)
  AUTHORS   Gonzalez-Pastor,J.E., San Millan,J.L., Castilla,M.A. and Moreno,F.
  TITLE     Structure and organization of plasmid genes required to produce the
            translation inhibitor microcin C7
  JOURNAL   J Bacteriol 177 (24), 7131-7140 (1995)
   PUBMED   8522520
REFERENCE   4  (residues 1 to 393)
  AUTHORS   Guijarro,J.I., Gonzalez-Pastor,J.E., Baleux,F., San Millan,J.L.,
            Castilla,M.A., Rico,M., Moreno,F. and Delepierre,M.
  TITLE     Chemical structure and translation inhibition studies of the
            antibiotic microcin C7
  JOURNAL   J Biol Chem 270 (40), 23520-23532 (1995)
   PUBMED   7559516
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014114.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02016.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..393
                     /product="LD-carboxypeptidase"
                     /calculated_mol_wt=42058
     Region          61..366
                     /region_name="Peptidase_S66"
                     /note="LD-Carboxypeptidase, a serine protease, includes
                     microcin C7 self immunity protein; cl00700"
                     /db_xref="CDD:469883"
     Site            order(139..140,241..242,244..245,267..268,270..271,
                     274..275,314..315)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:132882"
     Site            order(165,260,331)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:132882"
ORIGIN      
        1 mteptsrrrf lktctaagag llqacgtsat svpplpsshs vvkartvplq tprrqssggn
       61 llrvvassgf aedtnrvnta ltrlynagft vtnqqagsrr fqrfagtdaq raadfqevas
      121 grvatpkvlm glrggygaar ilphidfasl garmrehgtl ffgfsdvcav qlallakgnm
      181 msfagpmays dfgkpapgaf tmdafikgat qnrltvdvpy iqradveteg tlwggnlsvl
      241 aslagtpymp didggilfle dvgeqpyrie rmlntlylsg vlgkqraivf gdfrmekird
      301 lydssydfsa vakhisrtak ipvltgfpfg hiadkitfpl gahtrirmng nggysvafeg
      361 yptldasalt ldtllpppdl pifpesgvad ise
//
LOCUS       WP_235219910             236 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235219910
VERSION     WP_235219910.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 236)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 236)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..236
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=26446
     Region          49..236
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaae rithdypept gakkdkkist vsdyfrnirt hsvhprvsvg ydfggwriaa
       61 dyaryrkwnn nkysvdikel grndktssgk knhlniktqk tehqengtfh avsslglsti
      121 ydfdtgsrfk pyigmrvayg hvrhqvrsve qettavttyp snggtpsvat eastkkpahh
      181 esrsisslgf gavagvgidi tpnltldagy ryhnwgrlen trfktheasl gmryrf
//
LOCUS       WP_235219495             857 aa            linear   BCT 02-MAR-2025
DEFINITION  X2-like carbohydrate binding domain-containing protein, partial
            [Paenibacillus sp. FSL H8-237].
ACCESSION   WP_235219495
VERSION     WP_235219495.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. FSL H8-237
  ORGANISM  Paenibacillus sp. FSL H8-237
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 857)
  AUTHORS   Kosugi,A., Amano,Y., Murashima,K. and Doi,R.H.
  TITLE     Hydrophilic domains of scaffolding protein CbpA promote glycosyl
            hydrolase activity and localization of cellulosomes to the cell
            surface of Clostridium cellulovorans
  JOURNAL   J Bacteriol 186 (19), 6351-6359 (2004)
   PUBMED   15375114
REFERENCE   2  (residues 1 to 857)
  AUTHORS   Mosbah,A., Belaich,A., Bornet,O., Belaich,J.P., Henrissat,B. and
            Darbon,H.
  TITLE     Solution structure of the module X2 1 of unknown function of the
            cellulosomal scaffolding protein CipC of Clostridium cellulolyticum
  JOURNAL   J Mol Biol 304 (2), 201-217 (2000)
   PUBMED   11080456
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015407.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03442.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..857
                     /organism="Paenibacillus sp. FSL H8-237"
                     /db_xref="taxon:1227350"
     Protein         1..>857
                     /product="X2-like carbohydrate binding domain-containing
                     protein"
     Region          93..274
                     /region_name="COG4447"
                     /note="Uncharacterized conserved protein related to plant
                     photosystem II stability/assembly factor [General function
                     prediction only]"
                     /db_xref="CDD:443546"
     Region          226..>349
                     /region_name="COG4447"
                     /note="Uncharacterized conserved protein related to plant
                     photosystem II stability/assembly factor [General function
                     prediction only]"
                     /db_xref="CDD:443546"
     Region          549..720
                     /region_name="COG4447"
                     /note="Uncharacterized conserved protein related to plant
                     photosystem II stability/assembly factor [General function
                     prediction only]"
                     /db_xref="CDD:443546"
     Region          771..853
                     /region_name="CBM_X2"
                     /note="Carbohydrate binding domain X2; pfam03442"
                     /db_xref="CDD:427295"
ORIGIN      
        1 mvgslfsafp atthaassep ytwksvvtga gggfvpgiif nqtepnliya rtdiggayrw
       61 nqatsswvsi sdsvgwvdwn kngvdalatd pidpnkvyma tgtytnhwdn ngqimrsndr
      121 gntwqttplp fkvggnmpgr sagerlvidp nknnilyfga rsgnglwksi dsgvtwskvt
      181 sfpnvgtyiq nptldygndl vglswitfdk stgtlgnatq tiyvgvadta ssvyrstdgg
      241 vtwtalagqp tgflphhgel sstgdlyity sngvgpydgs kgevwkynkt sgawtnispt
      301 tgtdnwygfg glaldaqhpn tlmvsslnaw wpdevifrst nggatwsriw dwgnyperty
      361 kfsmditaap wldhgttsts ldpspklgwm mgdleidpfn snrmmygtga tiygsnnlts
      421 wdtggkvnis vmakgveeta vlglispptg tshlitalgd vsgfrhedls vaptkfqtsp
      481 swattmsidy aelspsymvr vgsadkektp smksigisnd ggvnwympns epsngtkttv
      541 ghgqvavsas gnsilwstsd igvyysktsg nswtasaglp agakiasdrv npnkyygfya
      601 gtfyvsvdgg atftangasg fptnnvaglq pneaqismka vpgiegdiwf aggntvenky
      661 glwhstnsga sftkltnvee adligygkaa pgqtymalyt vakidgvrgv frsddvgatw
      721 vrinddahqy akinmaitgd priygrvylg tngrgtlyad pvnppatgst itpitasfdk
      781 ktanqadvav tmtlngntls tikngtatlv agtdytvsgs tvtikkayla tqavgtttlt
      841 fsfsagatqs lavavtd
//
LOCUS       WP_235219913             231 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235219913
VERSION     WP_235219913.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 231)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 231)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..231
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=25913
     Region          48..231
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaae rithdypept aqkkgkistv sdyfrnirth sihprvsvgy dfggwriaad
       61 yaryrkwndn kysvnikrvk enngsgkklt qdlktenqen gtfhavsslg lsavydfdtg
      121 srfkpyagvr vayghvrhsi dstkkttdvi tappttsdga pttynanpqt qnpyhqsdsi
      181 rrvglgviag vgfditpnlt ldagyryhnw grlentrfkt heaslgmryr f
//
LOCUS       WP_235219915             220 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235219915
VERSION     WP_235219915.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 220)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 220)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..220
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=24628
     Region          48..220
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaae ritrdypept gakkgtistv sdyfrnirth sihprvsvgy dfgswriaad
       61 yaryrkwnns kysvsikelk nnkkkktenq engsfhavss lglsavydfk lndkfkpyig
      121 arvayghvrh sistkkttef lttagrpgvv pggykvsttp gahqesnsir rvglgviagv
      181 gfditpkltl dagyryhnwg rlentrfkth easlgvryrf
//
LOCUS       WP_235219941            1014 aa            linear   BCT 02-MAR-2025
DEFINITION  tape measure protein [Neisseria gonorrhoeae].
ACCESSION   WP_235219941
VERSION     WP_235219941.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040129.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20155.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..1014
                     /product="tape measure protein"
                     /calculated_mol_wt=108042
     Region          69..753
                     /region_name="HI1514"
                     /note="Phage tail tape-measure protein, controls tail
                     length [Mobilome: prophages, transposons]; COG3941"
                     /db_xref="CDD:443141"
     Region          109..298
                     /region_name="TMP_3"
                     /note="Tape measure protein; pfam20155"
                     /db_xref="CDD:466312"
ORIGIN      
        1 msdleakvri tvenhtkqgf dsaaadadka aekmrssgdn aakgfkaaid smhetmrnlh
       61 advkagfeaa gnqaqqasek vraevgkigs glsgltklla glatadfaks vldtadamqs
      121 insqvrqvts seteylavqq qlldtanrtc aslestanly vstsralkdy gytqqeilkf
      181 teatnnamti ggvgaqqqaa almqlsqalg sgvlqgdefk siskaapill dtiaeymgks
      241 rdeikklgse gkltadvifk aisgasekfg eqaakmpvtm gqaltvfsnn wqsmvsklln
      301 dsgtmsgiaa vikliadnln lvvpivagfa vavaaavapt lalnlallan pfgiiavaig
      361 tvvgliakfg deidvfgggw snlsdvirav wqiitetvge avgtvkswfd gltgrlnega
      421 ggwpslfgrv msvissaiga yvnvyinifa tgwmlikeaa ndmpqffanl gkaignvfis
      481 aierminkav gminsmidfa nkaasmagis gigklnkvrm grmddgglge rihdsltkdr
      541 agamanavre raadiheada lkgrggggha ktarkkpgan qgggkggksr sggpgaakdp
      601 mqawegeika rklahremqr etlahqewdl areaeywrak latvdangkt gvkirekilt
      661 ledqlskqst eakmnqaaew ekldkhklem ekdaadqala dgrisqlerl dleiefenrr
      721 yqiaydalqe rialaeqdpa ysqaaigklk aqmgelgrgh ertqaknegk renqrrkdap
      781 nvmemlqdgg rnvwqeaqqq mgqaftamla raqnfrqamn gffksmgqtf iqemvtkplt
      841 glmrrmvees aiykmifgtk etletaaaak taatkatett avvssnavqa asgaaasqah
      901 ipyvgpilav aamaammsav mglmggggsq ttttttrips aaggwdipag inpltqlhen
      961 emvlpaehaq tiremadqqg ggstviinst ggdfihkndl akllkqmkrd fkfv
//
LOCUS       WP_235220010             220 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235220010
VERSION     WP_235220010.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 220)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 220)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..220
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=24698
     Region          48..220
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaae rithdypkpt gtdksklstv sdyfrnirth sihprvsvgy dfggwriaad
       61 yaryrkwnns kysvsikelk nnkkkktenq engsfhavss lglsavydfk lndkfkpyig
      121 arvayghvrh sistkkttef ltvagarvtv pgtykvsttp gahqesnsir rvglgviagv
      181 gfditpnltl dagyryhnwg rlentrfkth easlgvryrf
//
LOCUS       WP_235219837             101 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail tube protein, partial [Escherichia coli].
ACCESSION   WP_235219837
VERSION     WP_235219837.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 101)
  AUTHORS   Campbell,P.L., Duda,R.L., Nassur,J., Conway,J.F. and Huet,A.
  TITLE     Mobile Loops and Electrostatic Interactions Maintain the Flexible
            Tail Tube of Bacteriophage Lambda
  JOURNAL   J Mol Biol 432 (2), 384-395 (2020)
   PUBMED   31711962
REFERENCE   2  (residues 1 to 101)
  AUTHORS   Pell,L.G., Cumby,N., Clark,T.E., Tuite,A., Battaile,K.P.,
            Edwards,A.M., Chirgadze,N.Y., Davidson,A.R. and Maxwell,K.L.
  TITLE     A conserved spiral structure for highly diverged phage tail
            assembly chaperones
  JOURNAL   J Mol Biol 425 (14), 2436-2449 (2013)
   PUBMED   23542344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027776.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16461.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>101
                     /product="phage tail tube protein"
     Region          <1..44
                     /region_name="Phage_TTP_12"
                     /note="Lambda phage tail tube protein, TTP; cl11463"
                     /db_xref="CDD:472191"
     Region          54..>100
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); cl02708"
                     /db_xref="CDD:445894"
ORIGIN      
        1 kirfpngtvd vfrgwvssig kavtakevit rtvkvtnvgr psmaedrstv tattgmtvtp
       61 asasvvkgqs ttltvafqpe gatdksfrav sadktkatvs v
//
LOCUS       WP_235220029             262 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235220029
VERSION     WP_235220029.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 262)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 262)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..262
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=29131
     Region          87..262
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mnpapknfss llfssllfss llfssaaqaa sedngrgpyv qadlayaaer ithdypkpta
       61 qkkdtistvs dyfrnirtrs vhprvsvgyd fggwriaady aryrkwnnnk ysvntknvrt
      121 hpdngtredl ktenqengsf haasslglsa iydfqindkf kpyigarvay ghvkhqvhsv
      181 etgttivtsk nggpipeapt rkpahhesrs trslgfgava gvgiditpnl tldagyryhn
      241 wgrlentrfk theaslgmry rf
//
LOCUS       WP_235220113             105 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1132 family protein [Neisseria gonorrhoeae].
ACCESSION   WP_235220113
VERSION     WP_235220113.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018300.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06575.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..105
                     /product="DUF1132 family protein"
                     /calculated_mol_wt=12420
     Region          11..104
                     /region_name="DUF1132"
                     /note="Protein of unknown function (DUF1132); pfam06575"
                     /db_xref="CDD:284087"
ORIGIN      
        1 mnkpfitqaq lalykyqpss eyfgqsmafi aqkefeefvn nvkeydiles fsyflnkrva
       61 hniwkiyfsd esvifirkse engktvhefv yqgytdssdf nsmfe
//
LOCUS       WP_235220121             262 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235220121
VERSION     WP_235220121.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 262)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 262)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..262
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=28934
     Region          88..262
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mnpapknfss llfssllfss llfssaaqaa segngrgpyv qadlayaaer ithdypkptg
       61 akkgttistv sdyfrnirth sihprvsvgy dfggwriaad yaryrkwnns kysvsikklq
      121 nqynkktenq engtfhaass lglsavydfk lndkfkpyig arvayghvrh sidstkkttg
      181 flttagarga aptvsspykn tqdahqesns irrvglgvia gvgfditpnl tldagyryhn
      241 wgrlentrfk theaslgvry rf
//
LOCUS       WP_235220155            1381 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein [Neisseria gonorrhoeae].
ACCESSION   WP_235220155
VERSION     WP_235220155.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 1381)
  AUTHORS   Wang,J., Hofnung,M. and Charbit,A.
  TITLE     The C-terminal portion of the tail fiber protein of bacteriophage
            lambda is responsible for binding to LamB, its receptor at the
            surface of Escherichia coli K-12
  JOURNAL   J Bacteriol 182 (2), 508-512 (2000)
   PUBMED   10629200
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024939.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13550.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1381
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..1381
                     /product="phage tail protein"
                     /calculated_mol_wt=150423
     Region          <177..1096
                     /region_name="COG4733"
                     /note="Phage-related protein, tail protein J [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443767"
     Region          222..405
                     /region_name="Phage-tail_3"
                     /note="Putative phage tail protein; pfam13550"
                     /db_xref="CDD:433300"
     Region          1054..1173
                     /region_name="DUF3672"
                     /note="Fibronectin type III protein; pfam12421"
                     /db_xref="CDD:289206"
ORIGIN      
        1 mggksstvts aeerilslqv qrssqgltlp viygrtrvag nliwygdfvt iehkavtrqg
       61 gkggggvkqv gisytyeaav mlalcegeiq gvgrvwrdke kfdspaqlrl tlmrggdeqp
      121 lwthlqqakh qgqalnysgt aylcspnyel tksaqiyqhn fevigksgys gnipdanpre
      181 ivldlltnqr ygcgfpsqni gdtdrysnyc ravgiflspa yteqgeaqrn iselleqtns
      241 aavfsqgrlk iipygdgshs gngavyvadn kaaydltddd fivsgaqdpv kagrktnada
      301 fnqiqveyld rdndynvaia eakdqanieq yglrpkdavk mhgicdakva qkvaqqllqr
      361 alyvrneyef klgwkyclle pmdivtltda glglnktpvr iteieedgeg vlsvkaedcp
      421 agvytvseyp tqpssgysad ynvspgnahv pvifeaplql tggepqiwla tagggmwgga
      481 evwvsadgds ytrvgavnrk arfgaltadl pdgavfdrtn tlgveisagq ltggteqdsr
      541 dlltlcyvdg eflayadael kgvgrytlgn ltrgaygsav nahaagsrfa ridealfkya
      601 vprnwigrtv wvklvsynvf gggiqdlaev paysytiega plgqiqnlrl tsswaygkea
      661 viawdkldga dtydveiyag gsrrrlravd givdnsytyt qadmkadggq vrgivfkvrg
      721 ravtgktgnw aqiaaqnpql qalqgisids glkqafftcq kpdeedfagi ivwvcenaac
      781 paadankayd gaetfitiak cggkplekgk tyylraagyd sfgkdnlkis gsisftvydv
      841 satdlsessl nkalrdkinl idgngagsvn erveavrsta dgnaaavqth arsingleaq
      901 ytvkvdangk vagfglattp kngtpeskfi vnadrfgiga agkadvfpfv vdtqknrvgi
      961 ngelvvngka vvdklnagdi hggkiaadtl danrlkagsv tareigaaav tadkiganav
     1021 tadkiqvadl savssnlgsi tggslniggg nftvssdgil tadnavirgr ieadsgyfng
     1081 tvrassvegd vlrahrlrwt egnvwvldld kdplprvlip nfyvvsetfg nnrvqaklll
     1141 nggvlaprev retenytnyi wrgrtfgrye dlppramggg dytkqsgsry rtrleyqiqv
     1201 ipagkpvslk lslashesvf spfvsvsyla qsdyeykqll grmvwrtfae sfrydskkqv
     1261 ylggdrrvhd yqnqmykhwn ayggllqlpd diygisfeyr pftnadwstm lafdrsdkfv
     1321 vvkkyrghap qqyslfqeef ntavpksnll ffvehwwqyi elrnirvlip esrenevwqv
     1381 g
//
LOCUS       WP_235220190             127 aa            linear   BCT 02-MAR-2025
DEFINITION  recombination protein NinB [Neisseria gonorrhoeae].
ACCESSION   WP_235220190
VERSION     WP_235220190.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 127)
  AUTHORS   Maxwell,K.L., Reed,P., Zhang,R.G., Beasley,S., Walmsley,A.R.,
            Curtis,F.A., Joachimiak,A., Edwards,A.M. and Sharples,G.J.
  TITLE     Functional similarities between phage lambda Orf and Escherichia
            coli RecFOR in initiation of genetic exchange
  JOURNAL   Proc Natl Acad Sci U S A 102 (32), 11260-11265 (2005)
   PUBMED   16076958
REFERENCE   2  (residues 1 to 127)
  AUTHORS   Tarkowski,T.A., Mooney,D., Thomason,L.C. and Stahl,F.W.
  TITLE     Gene products encoded in the ninR region of phage lambda
            participate in Red-mediated recombination
  JOURNAL   Genes Cells 7 (4), 351-363 (2002)
   PUBMED   11952832
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017578.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05772.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..127
                     /product="recombination protein NinB"
                     /calculated_mol_wt=15213
     Region          <33..119
                     /region_name="NinB"
                     /note="NinB protein; cl21658"
                     /db_xref="CDD:451348"
ORIGIN      
        1 mneakftltp enkkevmrli wdnlngwfen gnleitirpr kskrsieqnr rlwflyreis
       61 ekvfidgrrf sqdvwheflk rkfigciemp ngqlmgistt klsvremsey qekiiswasm
      121 ehgvlwd
//
LOCUS       WP_235220196             320 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Neisseria gonorrhoeae].
ACCESSION   WP_235220196
VERSION     WP_235220196.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02371.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..320
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=36146
     Region          5..320
                     /region_name="COG3547"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442768"
ORIGIN      
        1 mrnavgldis kltfdataiv gnaeysakfd ndskgldqfs drlkslgcqn lhicmeatgn
       61 yyeevadyfa qyysvyvvnp lkiskyaesr fkrtktgkqd akliaqycrs aqeselvkrq
      121 kptdeqyrll rmtaayaqik secaamknrh yaakdeeaak ayaeiikamn eqlevlkeki
      181 keqtekpnck egvkrletip aigrmtaavl fhhltsskfe tsnkfaafag lspqqkesgt
      241 svrgkgkltk fgnrklravl fmpamvayri rafpdfikrl eekkkpkkvi iaalmrklav
      301 iayhvhkkgg dydpsryksa
//
LOCUS       WP_235220199             265 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235220199
VERSION     WP_235220199.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 265)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 265)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..265
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=29990
     Region          88..265
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqpaknllfs sllfssllfs sllfpsaaqa asedggrgpy vqadlayaye hithdypkpt
       61 dpskgkistv sdyfrnirth sihprvsvgy dfggwriaad yaryrkwndn kysvdikele
      121 nknknkrdlk tenqengsfh avsslglsav ydfklndkfk pyigarvayg hvrhsidstk
      181 ktakiltssy gdgkptvypp eektrstyre sdsirrvglg viagvgfdit pkltldtgyr
      241 yhywgrlent rfktheaslg mryrf
//
LOCUS       WP_235220201             271 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235220201
VERSION     WP_235220201.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 271)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 271)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..271
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=30112
     Region          84..271
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqpaknllfs sllfssllfp saaqaasedg grgpyvqadl ayaaerithd ypkptgakkg
       61 ttistvsdyf rnirthsihp rvsvgydfgg wriaadyary rkwnnskysv sikellrndn
      121 adsggnkhln iktrktehre ngtfhaassl glsavydfdt gsrfkpyigm rvayghvkhq
      181 vrsvekettf vlsktlgvek pgiikdaptr klphhesrsi sslgfgavag vgiditpnlt
      241 ldagyryhnw grlentrfkt heaslgmryr f
//
LOCUS       WP_235220212              97 aa            linear   BCT 02-MAR-2025
DEFINITION  IS3 family transposase, partial [Neisseria gonorrhoeae].
ACCESSION   WP_235220212
VERSION     WP_235220212.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024729.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13333.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         <1..>97
                     /product="IS3 family transposase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <1..97
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 riqtrptfdl ageilkgape kpgpsekpml hsdqgwqyqm ffyqkqlkgn glvqslsrkg
       61 ncldnaames ffgtlksecf htckydsvte seaalhe
//
LOCUS       WP_235220215             426 aa            linear   BCT 02-MAR-2025
DEFINITION  malic enzyme-like NAD(P)-binding protein [Neisseria gonorrhoeae].
ACCESSION   WP_235220215
VERSION     WP_235220215.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015882.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03949.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..426
                     /product="malic enzyme-like NAD(P)-binding protein"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
                     /calculated_mol_wt=45878
     Region          4..>423
                     /region_name="PRK07232"
                     /note="bifunctional malic enzyme
                     oxidoreductase/phosphotransacetylase; Reviewed"
                     /db_xref="CDD:235976"
ORIGIN      
        1 menslkeaal kfhelpipgk isvtptksla tdkdlalays pgvaapcmei hadpqnayky
       61 tgkgnlvavi sngtavlglg digalagkpv megkgvlfkk fagvdvfdie idekdpqklv
      121 diiaaleptf gginledika pecfyierel rkrckipvfh ddqhgtaiit aaavlnalry
      181 tgrkieeatl vcsgagaaai aclnqlldlg lkrenvtvcd skgviyqtre dkdrmdeskk
      241 fyavedngrr vladavkgkd iflglsganl ltpemlntmn ekpivfaman pnpeilppla
      301 ketrpdvvig tgrsdfpnqv nnvlcfpfif rgaldvgatt ineemkracv yaladlamee
      361 vteevvaayg kkfefgaeyl iptpfdsrll prvataaaka amesgvatrp iadleayaak
      421 lgewkl
//
LOCUS       WP_235220216             273 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235220216
VERSION     WP_235220216.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 273)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 273)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..273
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=30177
     Region          87..273
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mnparkkpsl lfssllfssl lfssaaqaas edggrgpyvq adlayayehi thdypkptga
       61 kkgttistvs dyfrnirths vhprvsvgyd fggwriaady aryrkwnnnk ysvsikellr
      121 ndnsasgvrg hlniqtqkte hqengtfhaa sslglstiyd fdtgsrfkpy igarvayghv
      181 rhqvrsveqe teivttypkk gapspipgap tkkpahhesr sisslgfgav agvgiditpn
      241 ltldagyryh nwgrlentrf ktheaslgvr yrf
//
LOCUS       WP_235220217             220 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235220217
VERSION     WP_235220217.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 220)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 220)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..220
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=24712
     Region          48..220
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaae rithdypkpt gtdksklstv sdyfrnirth sihprvsvgy dfggwriaad
       61 yaryrkwnns kysvsikelk nkkkkktenq engsfhavss lglsavydfk lndkfkpyig
      121 arvayghvrh sistkkttef ltvagarvtv pgtykvsttp gahqesnsir rvglgviagv
      181 gfditpnltl dagyryhnwg rlentrfkth easlgvryrf
//
LOCUS       WP_235220235             268 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235220235
VERSION     WP_235220235.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 268)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 268)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..268
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=29962
     Region          88..268
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqpaknllfs sllfssllfs sllfssaaqa asedggrgpy vqadlayaye hithdypkpt
       61 gakkgkistv sdyfrnirth sihprvsvgy dfggwriaad yaryrkwnnn kysvnienvr
      121 khnngnridr ktenqengsf haasslglsa vydfklndkf kpyigarvay ghvrhsidst
      181 kktiefltap snapngastn ydispktqna hqesnsirrv glgviagvgf ditpkltlda
      241 gyryhnwgrl entrfkthea slgmryrf
//
LOCUS       WP_235220309             217 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin, partial [Neisseria gonorrhoeae].
ACCESSION   WP_235220309
VERSION     WP_235220309.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 217)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 217)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         <1..217
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
     Region          37..217
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 thdypeataq kkgttistvs dyfrnirths vhprvsvgyd fggwriaady aryrkwnnsk
       61 ysvntrnlrt hesngnrqdl ktenqengsf haasslglst vydfklndkf kpyigarvay
      121 ghvrhsidst kktievttvp snapngavtt yntdpktqnd yqsnsirrvg lgviagvgfd
      181 itpkltldag yryhnwgrle ntrfktheas lgvryrf
//
LOCUS       WP_235220312             237 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235220312
VERSION     WP_235220312.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 237)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 237)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..237
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=27087
     Region          48..237
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaye hitrdypdaa gankgkistv sdyfrnirth sihprvsvgy dfggwriaad
       61 yaryrkwnnn kysvsikelg rkdgtsssgr ylniktqkte hqengtfhav sslglstvyd
      121 frpndkfkpy igvrvgyghv rhsidstkkt rntltayhgn grgstyyddi epeknqknty
      181 rqnrssrrlg fgavagvgid itpkltldag yryhywgrle ntrfktheas lgmryrf
//
LOCUS       WP_235220321             237 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235220321
VERSION     WP_235220321.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 237)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 237)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..237
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=27034
     Region          48..237
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaye hitrdypdaa gankgkistv sdyfrnirth sihprvsvgy dfggwriaad
       61 yaryrkwsds kysvnikelg rkdgtsssgr ylniqtrkte nqengtfhav sslglstvyd
      121 frpndkfkpy igvrvgyghv rhsidstkkt rntltayhgn grgstyyddi epeknqknty
      181 rqnrssrrlg fgavagvgid itpkltldag yryhywgrle ntrfktheas lgvryrf
//
LOCUS       WP_235220322             416 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramoyl-L-alanine amidase [Neisseria gonorrhoeae].
ACCESSION   WP_235220322
VERSION     WP_235220322.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 416)
  AUTHORS   Kuroda,A., Sugimoto,Y., Funahashi,T. and Sekiguchi,J.
  TITLE     Genetic structure, isolation and characterization of a Bacillus
            licheniformis cell wall hydrolase
  JOURNAL   Mol Gen Genet 234 (1), 129-137 (1992)
   PUBMED   1495475
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013670.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01520.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..416
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /EC_number="3.5.1.28"
                     /GO_function="GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=45004
     Region          4..407
                     /region_name="amidase_AmiC"
                     /note="N-acetylmuramoyl-L-alanine amidase AmiC; NF038267"
                     /db_xref="CDD:468440"
ORIGIN      
        1 mtkltrrqii rrtagtlfal spiasavakt vrapqftaar iwpshtytrl tlestaalky
       61 qhfaldnpgr lvvdiqnani ntvlhglsqk vmaddpfirs iragqntptt vrlvidlkqp
      121 thaqvfalpp vggfkdrlvv dlyphgmdad dpmmallngs lnktlrgspe adlaqnttpr
      181 pgqgkngrrp vimldpghgg edpgavspgg lqekhvvlsi aretkkqlea lgynvfmtrn
      241 edvfiplgvr vakgrarrad vfvsihadaf tspsargtgv ymlntkgats saakfleqtq
      301 nnadavagvp tsgnrnvdta lldmtqtatl rdsrklgklv leelgrlnhl hkgrvdeanf
      361 avlrapdmps ilvetaflsn paeekllgse sfrrqcaqsi asgvqryint svlkrg
//
LOCUS       WP_235220329             181 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Neisseria gonorrhoeae].
ACCESSION   WP_235220329
VERSION     WP_235220329.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024172.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12762.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..181
                     /product="transposase"
                     /calculated_mol_wt=19691
     Region          1..181
                     /region_name="COG3676"
                     /note="Transposase and inactivated derivatives [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:442892"
ORIGIN      
        1 mkithcklkk evqkeplrsf vpevtarsaa dilgihpdsa alfyrkirtv tnhrlalaad
       61 evfegpagpg ascfggrrkg rrgrgaagka vvfgipkrng raytvaedda epetllpavk
      121 kkimpdgivy adspgsrgkl daggftrcri nrskefrece frlnsgtpsr qlkilrdrcg
      181 i
//
LOCUS       WP_235220339             335 aa            linear   BCT 02-MAR-2025
DEFINITION  LysM peptidoglycan-binding domain-containing protein, partial
            [Neisseria gonorrhoeae].
ACCESSION   WP_235220339
VERSION     WP_235220339.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 335)
  AUTHORS   Bateman,A. and Bycroft,M.
  TITLE     The structure of a LysM domain from E. coli membrane-bound lytic
            murein transglycosylase D (MltD)
  JOURNAL   J Mol Biol 299 (4), 1113-1119 (2000)
   PUBMED   10843862
REFERENCE   2  (residues 1 to 335)
  AUTHORS   Joris,B., Englebert,S., Chu,C.P., Kariyama,R., Daneo-Moore,L.,
            Shockman,G.D. and Ghuysen,J.M.
  TITLE     Modular design of the Enterococcus hirae muramidase-2 and
            Streptococcus faecalis autolysin
  JOURNAL   FEMS Microbiol Lett 70 (3), 257-264 (1992)
   PUBMED   1352512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01476.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         <1..335
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
     Region          14..48
                     /region_name="LysM"
                     /note="LysM domain; pfam01476"
                     /db_xref="CDD:396179"
     Region          <206..332
                     /region_name="mltD"
                     /note="membrane-bound lytic murein transglycosylase D;
                     Provisional; PRK10783"
                     /db_xref="CDD:182727"
ORIGIN      
        1 lfswvvytpa aktslsdist atgmsiadik rlnnlkgnlv nagrsilvak ngktlhtase
       61 svvsididnt pdtyrsnmpa gtvnvsiari qpaaaqtadi tvaplpqetv rtepdplvri
      121 aepalataaa qpqtekqtam psetqtatla qvvppndmqa adelmqlvar nnlrrqaeet
      181 isavigtpdt vaehnisssp qhtvaadgkr rarletrvak aadgeaetsp lhasihrvve
      241 gdtlfniakr ynvsvadliv annikgntiq kgqvlrlaqa apaqtriekv sytarkgdtf
      301 ksiaarfnih iddirrlnpn lntinpgqrv kligs
//
LOCUS       WP_235220365             211 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein [Bordetella bronchiseptica].
ACCESSION   WP_235220365
VERSION     WP_235220365.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024554.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13155.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..211
                     /product="toprim domain-containing protein"
                     /calculated_mol_wt=23700
     Region          <62..210
                     /region_name="PHA02031"
                     /note="putative DnaG-like primase"
                     /db_xref="CDD:222844"
ORIGIN      
        1 meslaarler lkreqaldqg lrrvqhlpgp pnfdvgtwpp aarvwlfkag igvpeigelg
       61 aywhessgrl viplfdrdgn llywqardva wtrrssrpky vnpqvdkqcl vakygrgdpl
      121 vltedvlsay rvgrsteaws lmgtsltdcv aasilttrpv rvwldpdrpg riaartitkq
      181 lrelgidaar visradpkil snreirnllq r
//
LOCUS       WP_235220388             549 aa            linear   BCT 02-MAR-2025
DEFINITION  rhodanese-like domain-containing protein [Bordetella
            bronchiseptica].
ACCESSION   WP_235220388
VERSION     WP_235220388.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
REFERENCE   1  (residues 1 to 549)
  AUTHORS   Gliubich,F., Gazerro,M., Zanotti,G., Delbono,S., Bombieri,G. and
            Berni,R.
  TITLE     Active site structural features for chemically modified forms of
            rhodanese
  JOURNAL   J Biol Chem 271 (35), 21054-21061 (1996)
   PUBMED   8702871
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00581.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..549
                     /product="rhodanese-like domain-containing protein"
                     /calculated_mol_wt=58620
     Region          5..102
                     /region_name="PspE"
                     /note="Rhodanese-related sulfurtransferase [Inorganic ion
                     transport and metabolism]; COG0607"
                     /db_xref="CDD:440372"
     Region          118..224
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            189
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238089"
     Region          262..360
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            327
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238089"
     Region          390..485
                     /region_name="PspE"
                     /note="Rhodanese-related sulfurtransferase [Inorganic ion
                     transport and metabolism]; COG0607"
                     /db_xref="CDD:440372"
     Region          <459..>513
                     /region_name="SseA"
                     /note="3-mercaptopyruvate sulfurtransferase SseA, contains
                     two rhodanese domains [Inorganic ion transport and
                     metabolism]; COG2897"
                     /db_xref="CDD:442142"
ORIGIN      
        1 melstvselr dlratsdeya lfdvresaqa hhghifgatf lprrmlaari aslaprrstp
       61 ivlydeggpd prarlaaqal arfgytgvrv ldgglrtwla qgeapcrgsn vpskwfgetv
      121 hahaatpalp iatlqvwret gsahricdir speeygrari pgaagafgsd lawhaddlrr
      181 agqpvvvhcs grtrsiiace slrllgvqda yalengtmgw rlaglalerg pgsgslaasa
      241 asrrdgarrt qalaraagva sveaamlarw lderdagrin lyvldirqva eyraghlpga
      301 ialpgglavq rtdeflpvra aqvvlvddde araalagywl ramglprvav lagglpawra
      361 agyaldhgrd rprpadhada maarpcpahd vheagarmqr vyvdtqarfl agrpdaaewv
      421 pfggleswla arakrqdera vvlmahdesl arsaalnarl agfdaavlag gvtawqaqgl
      481 plasgpgggv aqaadvvvqp ydaglqamrd yleweqaltr qaiptlplya ayrvprppaa
      541 dmeqdqeap
//
LOCUS       WP_235220425             218 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4142 domain-containing protein [Bordetella bronchiseptica].
ACCESSION   WP_235220425
VERSION     WP_235220425.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025013.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13628.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..218
                     /product="DUF4142 domain-containing protein"
                     /calculated_mol_wt=22966
     Region          34..178
                     /region_name="COG3652"
                     /note="Predicted outer membrane protein, contains DUF4142
                     domain [Function unknown]"
                     /db_xref="CDD:442869"
ORIGIN      
        1 mgrlrslata atggrrlala arwlagllcl giwaaqaspa adeawlrraa qlaqtsaqaa
       61 alarqhgasg dvqayarqaa arlqdlgrgl advahaqavt lpagpdvtqr thlqelaqqr
      121 eaafdrmylh wagvalgeet lrhyrqaaee aqaapvrefa vhtlpmlqnl lqdarrlarp
      181 ppqaeprklp pggpgepapp spaspsapps idatrpgr
//
LOCUS       WP_235220450             267 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase domain-containing protein [Bordetella
            bronchiseptica].
ACCESSION   WP_235220450
VERSION     WP_235220450.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025217.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13847.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..267
                     /product="methyltransferase domain-containing protein"
                     /calculated_mol_wt=28769
     Region          33..>121
                     /region_name="COG2263"
                     /note="Predicted RNA methylase [General function
                     prediction only]"
                     /db_xref="CDD:441864"
ORIGIN      
        1 mllallatpa lalaqpawtq qpppvkldvp yvptpddava rmlemadvta qdtvidlgsg
       61 dgriaiaavr drgarsamgv didperiaea ranakkagla drvtfvqqdl fdtdiskatv
      121 ltmyllpdvn lklrprilns lapgtrvvsh aftmgewdsd ryelvdgrsl ylwvvpahaa
      181 gdwqvedpag pftlsvrqdf qkvtasaqrq gerlgvaeaa lrgtdlrftv dagsgprtyv
      241 griqgermta vqapgnesgw ratrrap
//
LOCUS       WP_235220451             390 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Bordetella bronchiseptica].
ACCESSION   WP_235220451
VERSION     WP_235220451.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..390
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=40661
     Region          <11..>226
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 mredaasgra tvtgraepga rvqvaipgea pqtvtadsag ryravspgdv lqsgtvrvta
       61 tdahgnasap rdvpyqdavd rtappltiea aveqartgvv nvsgatepga tvsvtfpdgq
      121 varatadrsg aytvhsardv targnisvva tdaagnasps vsrqfsntva dtvppsltia
      181 mvttdpgngr itvsgvteag arvhvvfpgg asdtvtadsk ggyratsagd vgsgavtaqa
      241 tdasanrspl ktyaytdawq prqlsakdfg qsryfvpltt rggtdnepll ritnqqipta
      301 elrvalkpyk tedragrlvr eaialkwgda pgvsgdartl hfyvpasaka klrkeltdve
      361 rsndykfwie ftdtrfggva rlyikvistl
//
LOCUS       WP_235220452             113 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Bordetella bronchiseptica].
ACCESSION   WP_235220452
VERSION     WP_235220452.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..113
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=11687
     Region          <29..>109
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 mtsglirara tdrygdtsqe vtyaytdtvd ktapvlsiag vatdeatrrv tvtgrsepda
       61 qvtirfpggg rktvradang ayhvrsdgdl pagvivvqaa daagnstqaq qay
//
LOCUS       WP_235220489            1593 aa            linear   BCT 02-MAR-2025
DEFINITION  S6 family peptidase [Neisseria gonorrhoeae].
ACCESSION   WP_235220489
VERSION     WP_235220489.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 1593)
  AUTHORS   Maldonado-Contreras,A., Birtley,J.R., Boll,E., Zhao,Y., Mumy,K.L.,
            Toscano,J., Ayehunie,S., Reinecker,H.C., Stern,L.J. and
            McCormick,B.A.
  TITLE     Shigella depends on SepA to destabilize the intestinal epithelial
            integrity via cofilin activation
  JOURNAL   Gut Microbes 8 (6), 544-560 (2017)
   PUBMED   28598765
REFERENCE   2  (residues 1 to 1593)
  AUTHORS   Johnson,T.A., Qiu,J., Plaut,A.G. and Holyoak,T.
  TITLE     Active-site gating regulates substrate selectivity in a
            chymotrypsin-like serine protease the structure of haemophilus
            influenzae immunoglobulin A1 protease
  JOURNAL   J Mol Biol 389 (3), 559-574 (2009)
   PUBMED   19393662
REFERENCE   3  (residues 1 to 1593)
  AUTHORS   Henderson,I.R., Czeczulin,J., Eslava,C., Noriega,F. and Nataro,J.P.
  TITLE     Characterization of pic, a secreted protease of Shigella flexneri
            and enteroaggregative Escherichia coli
  JOURNAL   Infect Immun 67 (11), 5587-5596 (1999)
   PUBMED   10531204
REFERENCE   4  (residues 1 to 1593)
  AUTHORS   Benjelloun-Touimi,Z., Si Tahar,M., Montecucco,C., Sansonetti,P.J.
            and Parsot,C.
  TITLE     SepA, the 110 kDa protein secreted by Shigella flexneri: two-domain
            structure and proteolytic activity
  JOURNAL   Microbiology (Reading) 144 (Pt 7), 1815-1822 (1998)
   PUBMED   9695914
REFERENCE   5  (residues 1 to 1593)
  AUTHORS   Stein,M., Kenny,B., Stein,M.A. and Finlay,B.B.
  TITLE     Characterization of EspC, a 110-kilodalton protein secreted by
            enteropathogenic Escherichia coli which is homologous to members of
            the immunoglobulin A protease-like family of secreted proteins
  JOURNAL   J Bacteriol 178 (22), 6546-6554 (1996)
   PUBMED   8932311
REFERENCE   6  (residues 1 to 1593)
  AUTHORS   Bachovchin,W.W., Plaut,A.G., Flentke,G.R., Lynch,M. and
            Kettner,C.A.
  TITLE     Inhibition of IgA1 proteinases from Neisseria gonorrhoeae and
            Hemophilus influenzae by peptide prolyl boronic acids
  JOURNAL   J Biol Chem 265 (7), 3738-3743 (1990)
   PUBMED   2105953
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014452.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02395.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..1593
                     /product="S6 family peptidase"
                     /GO_function="GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=175928
     Region          28..849
                     /region_name="Peptidase_S6"
                     /note="Immunoglobulin A1 protease; pfam02395"
                     /db_xref="CDD:396804"
     Region          747..978
                     /region_name="PL1_Passenger_AT"
                     /note="Pertactin-like passenger domains (virulence
                     factors), C-terminal, subgroup 1, of autotransporter
                     proteins of the type V secretion system of Gram-negative
                     bacteria. This subgroup includes the passenger domains of
                     Neisseria and Haemophilus IgA1 proteases; cd01343"
                     /db_xref="CDD:238653"
     Region          944..>1213
                     /region_name="tolA_full"
                     /note="TolA protein; TIGR02794"
                     /db_xref="CDD:274303"
     Region          <1108..1348
                     /region_name="PRK05035"
                     /note="electron transport complex protein RnfC;
                     Provisional; cl47132"
                     /db_xref="CDD:481472"
     Region          1348..>1528
                     /region_name="Autotransporter"
                     /note="Autotransporter beta-domain; pfam03797"
                     /db_xref="CDD:461054"
ORIGIN      
        1 mkakrfkina islsiflaya ltpyseaalv rddvdyqifr dfaenkgkff vgatdlsvkn
       61 krgqnignal snvpmidfsv advnkriatv vdpqyavsvk hakaevhtfy ygqynghndv
      121 adkeneyrvv eqnnyephka wgasnlgrle dynmarfnkf vtevapiapt daggglntyk
      181 dknrfssfvr igagrqlvye kgvyhqegne kgydlrdlsq ayryaiagtp ykdinidqtm
      241 ntegligfgn hnkqysaeel kqalsqdalt nygvlgdsgs plfafdkqkn qwvflgtydy
      301 wagygkkswq ewniykkefa dkikqhdnag tvkgngehhw kttgtnshig stavrlanne
      361 gdanngqnvt fedngtlvld qninqgaggl ffkgdytvkg annditwlga gidvadgkkv
      421 vwqvknpngd rlakigkgtl eingtgvnqg qlkvgdgtvi lnqkadadkk vqafsqvgiv
      481 sgrgtlvlns snqinpdnly fgfrggrlda ngndltfehi rnvdegariv nhntdhasti
      541 tltgkslitn pnslsvhsiq ndydeddysy yyrprrpipq gkdlyyknyr yyalksggsv
      601 napmpengva enndwvfmgy tqeeakknam nhknnqrisg fsgffgeeng kghngalnln
      661 fngksaqnrf lltgganlng kisvtqgnvl lsgrptphar dfvnkssark dahfsknnev
      721 vfeddwinrt fkaaeiavnq sasfssgrnv sditanitat dnakvnlgyk ngdevcvrsd
      781 ytgyvtcntg nlsdkalnsf datringnvn lnqnaalvlg kaalwgkiqg qgnsrvslnq
      841 hskwhltgds qvhnlslads hihlnnasda qsankyhtlk inhlsgnghf hylthleknl
      901 gdkvlvkesa sghyqlhvqn ktgepnqerl dlfdassvqd rsrlfvslan hyvdlgalry
      961 tiktengitr lynpyagnrr pvkpapspaa ntasqaqkat qtdgaqiakp qnivvappsp
     1021 qanqaeealr qqakaeqvkr qqaeagrksa elsakqrage eerrqtaqsq pqrrkrraap
     1081 qdymavsqdr pkrrghrsvq qnnveiaqaq aelarrqqee rkaaellakq raeaereaqa
     1141 laarrkaeae eakhqaaela hrqeakrkaa esakrkaeee ehrqtaqsqp qrrkrraapq
     1201 dymavsqdrp krrgrrstlp appspsfdss ayaapralhn pdwyendyee ipldaleded
     1261 vsesvdtsdk qpqdntelhe kveavslqpr aaqprtqaaa qadavstntn salsdamast
     1321 qsilldtgas ltrhiaqksr adaeknsvwm sntgygrdya saqyrrfssk rtqtqigidr
     1381 slsenmqigg vltysdsqht fdqaggkntf vqanlygkyy lndawyvagd igagslrsrl
     1441 qtqqkanfnr tsiqtgltlg ntlkinqfei vpsagirysr lssadyklgd dsvkvssmav
     1501 ktltagldfa yrfkvgnltv kpllsaayfa nygkggvnvg gksfaykadn qqqysagaal
     1561 lyrnvtlnvn gsitkgkqle kqksgqikiq irf
//
LOCUS       WP_235220510             157 aa            linear   BCT 02-MAR-2025
DEFINITION  PilX family type IV pilin [Neisseria gonorrhoeae].
ACCESSION   WP_235220510
VERSION     WP_235220510.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Helaine,S., Dyer,D.H., Nassif,X., Pelicic,V. and Forest,K.T.
  TITLE     3D structure/function analysis of PilX reveals how minor pilins can
            modulate the virulence properties of type IV pili
  JOURNAL   Proc Natl Acad Sci U S A 104 (40), 15888-15893 (2007)
   PUBMED   17893339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022965.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11530.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..157
                     /product="PilX family type IV pilin"
                     /calculated_mol_wt=17373
     Region          1..>35
                     /region_name="PRK10574"
                     /note="putative major pilin subunit; Provisional"
                     /db_xref="CDD:236718"
     Region          31..157
                     /region_name="Pilin_PilX"
                     /note="Minor type IV pilin, PilX; pfam11530"
                     /db_xref="CDD:288394"
ORIGIN      
        1 meqkgftlie mmivvtilgi isviaipsyq syiekgyqsq lytemvginn vlkqfilknp
       61 qddndilksk leifvsgykm npkiakkysv svrfvdaekp rayrlvgvpn agtgytlsvw
      121 mnsvgdgykc rdatsaqays dtlsadsgce afsnrkk
//
LOCUS       WP_235220596             265 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235220596
VERSION     WP_235220596.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 265)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 265)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..265
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=29330
     Region          84..265
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqpaknllfs sllfssllfp saaqaasedg grgpyvqadl ayayehitrd ypdaaganqg
       61 kkistvsdyf rnirthsihp rvsvgydfgg wriaadyary rkwnnnkysv ntklvkmggn
      121 qklrneqtlk tenqengtfh aasslglsav ydfklndkfk pyigarvayg hvrhqvrsvq
      181 qetdivttyp esgapssvpg aavgkpayhe srsisslgfg avagvgidit pkltldagyr
      241 yhywgrlent rfktheaslg mryrf
//
LOCUS       WP_235220597             270 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235220597
VERSION     WP_235220597.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 270)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 270)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..270
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=30301
     Region          93..270
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqpaknllfs sllfssllfs sllfssllfp saaqaagegn grgpyvqadl ayayehithd
       61 ypeptgtkkd kistvsdyfr nirthsvhpr vsvgydfggw riaadyaryr kwnnnkysvn
      121 iekvqeihkn ridrktenqe ngtfhavssl glsavydfkl ndkfkpyiga rvayghvrhs
      181 idstkktaki ltsfygggkp ttydigpktq dahqesnsir rvglgviagv gfgitpnltl
      241 dagyryhywg rlentrfkth easlgvryrf
//
LOCUS       WP_235220616            1014 aa            linear   BCT 02-MAR-2025
DEFINITION  tape measure protein [Neisseria gonorrhoeae].
ACCESSION   WP_235220616
VERSION     WP_235220616.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040129.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20155.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..1014
                     /product="tape measure protein"
                     /calculated_mol_wt=108054
     Region          109..298
                     /region_name="TMP_3"
                     /note="Tape measure protein; pfam20155"
                     /db_xref="CDD:466312"
     Region          <352..508
                     /region_name="COG5412"
                     /note="Phage-related protein [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:444167"
     Region          <617..>801
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
ORIGIN      
        1 msdleakvri tvenhtkqgf dsaaadadka aekmrssgdn aakgfkaaid smhetmrnlh
       61 advkagfeaa gnqaqqasek vraevgkigs glsgltklla glatadfaks vldtadamqs
      121 insqvrqvts seteylavqq qlldtanrtc aslestanly vstsralkdy gytqqeilkf
      181 teatnnamti ggvgaqqqaa allqlsqalg sgvlqgdefk siskaapill dtiaeymgks
      241 rdeikklgse gkltadvifk aisgasekfg eqaakmpvtm gqaltvfsnn wqsmvsklln
      301 dsgtmsgiaa vikliadnln lvvpivagfa vavaaavapt lalnlallan pfgiiavaig
      361 tvvgliakfg deidvfgggw snlsdvirav wqiitetvge avgtvkswfd gltgrlnega
      421 ggwpslfgrv msvissaiga yvnvyinifa tgwmlikeaa ndmpqffanl gkaignvfis
      481 aierminkav gminsmidfa nkaasmagis gigklnkvrm grmddgglge rihdsltkdr
      541 agamanavre raadiheada lkgrggggha ktarkkpgan qgggkggksr sggpgaakdp
      601 mqawegeika rklahremqr etlthqewdl areaeywrak latvdangkt gvkirekilt
      661 ledqlskqst eakmnqaaew ekldkhklem ekdaadqala dgrisqlerl dleiefenrr
      721 yqiaydalqe rialaeqdpa ysqaaigklk aqmgelgrgh ertqaknegk renqrrkdap
      781 nvmemlqdgg rnvwqeaqqq mgqaftamla raqnfrqamn gffksmgqtf iqemvtkplt
      841 glmrrmvees aiykmifgtk etletaaaak taatkatett avvssnavqa asgaaasqah
      901 ipyvgpilav aamaammsav mglmggggsq ttttttrips aaggwdipag inpltqlhen
      961 emvlpaehaq tiremadqqg ggstviinst ggdfihkndl akllkqmkrd fkfv
//
LOCUS       WP_235220606             209 aa            linear   BCT 02-MAR-2025
DEFINITION  biliverdin-producing heme oxygenase [Neisseria gonorrhoeae].
ACCESSION   WP_235220606
VERSION     WP_235220606.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 209)
  AUTHORS   Wilks,A.
  TITLE     Heme oxygenase: evolution, structure, and mechanism
  JOURNAL   Antioxid Redox Signal 4 (4), 603-614 (2002)
   PUBMED   12230872
REFERENCE   2  (residues 1 to 209)
  AUTHORS   Ryter,S.W. and Tyrrell,R.M.
  TITLE     The heme synthesis and degradation pathways: role in oxidant
            sensitivity. Heme oxygenase has both pro- and antioxidant
            properties
  JOURNAL   Free Radic Biol Med 28 (2), 289-309 (2000)
   PUBMED   11281297
REFERENCE   3  (residues 1 to 209)
  AUTHORS   Maines,M.D.
  TITLE     Heme oxygenase: function, multiplicity, regulatory mechanisms, and
            clinical applications
  JOURNAL   FASEB J 2 (10), 2557-2568 (1988)
   PUBMED   3290025
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10083246
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..209
                     /product="biliverdin-producing heme oxygenase"
                     /EC_number="1.14.14.18"
                     /GO_function="GO:0004392 - heme oxygenase (decyclizing)
                     activity [Evidence IEA]"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006788 - heme oxidation [Evidence IEA]"
                     /calculated_mol_wt=23521
     Region          11..190
                     /region_name="HemeO-like"
                     /note="heme oxygenase; cd00232"
                     /db_xref="CDD:350855"
     Site            order(16,23,26..27,52,112..114,116..117,120,124,153,157,
                     181,184,188)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:350855"
     Region          105..131
                     /region_name="kinked helix"
                     /note="kinked helix [structural motif]"
                     /db_xref="CDD:350855"
ORIGIN      
        1 msetenqalt fakrlkadtt avhdsvdnlv msvqpfvske nyikflklqs vfhkavdhiy
       61 kdpelnkais eleymaryda vtqdlkdlge epykfdkelp hetgnkavvw lycaegsnlg
      121 aaflfkhaqk ldytgehgar hlaphpdgrg khwrafvehl nalnltpeae aeaiqgaqea
      181 fafykvilre tfglpegtea pegmmphrh
//
LOCUS       WP_235220612             629 aa            linear   BCT 02-MAR-2025
DEFINITION  type IV secretory system conjugative DNA transfer family protein
            [Neisseria gonorrhoeae].
ACCESSION   WP_235220612
VERSION     WP_235220612.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 629)
  AUTHORS   Lu,J., Wong,J.J., Edwards,R.A., Manchak,J., Frost,L.S. and
            Glover,J.N.
  TITLE     Structural basis of specific TraD-TraM recognition during F
            plasmid-mediated bacterial conjugation
  JOURNAL   Mol Microbiol 70 (1), 89-99 (2008)
   PUBMED   18717787
REFERENCE   2  (residues 1 to 629)
  AUTHORS   Gunton,J.E., Gilmour,M.W., Baptista,K.P., Lawley,T.D. and
            Taylor,D.E.
  TITLE     Interaction between the co-inherited TraG coupling protein and the
            TraJ membrane-associated protein of the H-plasmid conjugative DNA
            transfer system resembles chromosomal DNA translocases
  JOURNAL   Microbiology (Reading) 153 (Pt 2), 428-441 (2007)
   PUBMED   17259614
REFERENCE   3  (residues 1 to 629)
  AUTHORS   Schroder,G., Krause,S., Zechner,E.L., Traxler,B., Yeo,H.J.,
            Lurz,R., Waksman,G. and Lanka,E.
  TITLE     TraG-like proteins of DNA transfer systems and of the Helicobacter
            pylori type IV secretion system: inner membrane gate for exported
            substrates?
  JOURNAL   J Bacteriol 184 (10), 2767-2779 (2002)
   PUBMED   11976307
REFERENCE   4  (residues 1 to 629)
  AUTHORS   Dougherty,B.A., Hill,C., Weidman,J.F., Richardson,D.R., Venter,J.C.
            and Ross,R.P.
  TITLE     Sequence and analysis of the 60 kb conjugative,
            bacteriocin-producing plasmid pMRC01 from Lactococcus lactis
            DPC3147
  JOURNAL   Mol Microbiol 29 (4), 1029-1038 (1998)
   PUBMED   9767571
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014581.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02534.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..629
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=70041
     Region          4..629
                     /region_name="PRK13880"
                     /note="conjugal transfer coupling protein TraG;
                     Provisional"
                     /db_xref="CDD:237540"
ORIGIN      
        1 mfrsknkrnn avghqnqvqr tgsgrlvnfi clvlvllagm gaatqyfahq fqyhsqlgyg
       61 igkfympwsi liwygkwhgr yeqqfmmafs imlmvvaigm igmlvwnivr kntnkahesl
      121 hgsarwadrk dieaaglltk kgedsdgvyv ggwvdksgtl hylrhsepeh vltyaptrsg
      181 kglglvlptl lswphstfit dlkgelwalt agwrkkyahn kvirfepasa qgsaawnpld
      241 eirvgteyei gdvqnlatmi vdpdgkglns hwdktafall tgvilhalyk arddggvatl
      301 psvdrmlsdp ekpvgdlwve matyphadgr plpvissagq dmldrpeeea gsvlstaksf
      361 lalyrdnvva anvshsdfki kdlmndedpv slyiitqpnd karlrplvri linmiirlsa
      421 dkmdfengrp kvhykhkmla mldefpslgk leimqeslaf iagygikcyl icqdlnqlks
      481 retgygpdet itsnchvqna yppnrietae hlskltgitt vvkeqittsg krvsamlgqv
      541 srttqevqrp lltadecmrm pgpvkdasgl itqagdmviy vagypaiygr qtlyfkdpvf
      601 earskvpppr htdrtqkkta ntpsafdtl
//
LOCUS       WP_235220666             530 aa            linear   BCT 02-MAR-2025
DEFINITION  IgG-binding virulence factor TspB family protein [Neisseria
            gonorrhoeae].
ACCESSION   WP_235220666
VERSION     WP_235220666.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 530)
  AUTHORS   Muller,M.G., Moe,N.E., Richards,P.Q. and Moe,G.R.
  TITLE     Resistance of Neisseria meningitidis to human serum depends on T
            and B cell stimulating protein B
  JOURNAL   Infect Immun 83 (4), 1257-1264 (2015)
   PUBMED   25583528
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05616.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..530
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /calculated_mol_wt=58638
     Region          46..521
                     /region_name="Neisseria_TspB"
                     /note="Neisseria meningitidis TspB protein; pfam05616"
                     /db_xref="CDD:283306"
ORIGIN      
        1 mnsfikstpi vlililcssn sysepvrlek sqikfqssnn lksigfklds ssnsfskfte
       61 aanfehiptg akarinakit asvsragvls gvgklvrqga kfgtravpyv gtallahdvy
      121 qtfkediqar gcrydpetdk fvkgyeyanc lwyederrin rtygcygvds simrlmpdrs
      181 rfpevkqlme sqmyrlarpf wnwrkeelnk lssldwnnfv lnrctfdwng ggcavnkgdd
      241 fragasfslg rnpkykeemd akkpeeilsl kvdadpdkyi eatgypgyse kvevapgtkv
      301 nmgpvtdrng npvqvaatfg rdaqgnttad vqviprpdlt pasaeaphaq pppevspaen
      361 pannpdpden pgtrpnpepd pdlnpdanpd tdgqpgtspd spavpdrpng rhrkerkege
      421 dgglscdyfp eilacqemgk psdrmfhdis ipqvtddktw sshnflpsng vcpqpktfhv
      481 fgrqyrasye plcvfaekir favllafiim safvvfgslg ggnkchyfpa
//
LOCUS       WP_235220676             269 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235220676
VERSION     WP_235220676.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 269)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 269)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..269
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=29860
     Region          82..269
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mnparkkpsl lfssllfssa aqaasedggr gpyvqadlay ayehithdyp daaganqgkk
       61 istvsdyfkn irthsihprv svgydfggwr iaadyaryrk wnnnkysvdi kelqrndnad
      121 svgnkhlnik hqkterqeng tfhavsslgl stiydfdtgs rfkpyigmrv ayghvrhqvh
      181 smekettavt typsnggtps vtteastkkp ahhesrsiss lgfgavagvg iditpnltld
      241 agyryhnwgr lentrfkthe aslgvryrf
//
LOCUS       WP_235220694             569 aa            linear   BCT 02-MAR-2025
DEFINITION  LPD7 domain-containing protein, partial [Neisseria gonorrhoeae].
ACCESSION   WP_235220694
VERSION     WP_235220694.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 569)
  AUTHORS   Iyer,L.M., Burroughs,A.M., Anand,S., de Souza,R.F. and Aravind,L.
  TITLE     Polyvalent Proteins, a Pervasive Theme in the Intergenomic
            Biological Conflicts of Bacteriophages and Conjugative Elements
  JOURNAL   J Bacteriol 199 (15), e00245-17 (2017)
   PUBMED   28559295
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 569)
  AUTHORS   Maindola,P., Raina,R., Goyal,P., Atmakuri,K., Ojha,A., Gupta,S.,
            Christie,P.J., Iyer,L.M., Aravind,L. and Arockiasamy,A.
  TITLE     Multiple enzymatic activities of ParB/Srx superfamily mediate
            sexual conflict among conjugative plasmids
  JOURNAL   Nat Commun 5, 5322 (2014)
   PUBMED   25358815
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037421.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18821.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         <1..569
                     /product="LPD7 domain-containing protein"
     Region          <1..569
                     /region_name="PRK13878"
                     /note="conjugal transfer relaxase TraI; Provisional"
                     /db_xref="CDD:237539"
ORIGIN      
        1 ssvdrefsks alekrlgafd qktgvkakps ktyrekplsk anvddlfrqy keekelqksr
       61 rqdfflhlaq nrdmeigrik ekyafrrsli rhsssgiarr ilyrmlfrqm kdeirsvrtd
      121 yarrravffe qnkgfawadw lkhraaegdv raldalrrrg kdagykgnrf vgkesggfag
      181 ikvdtvtkkg tviyaedgmt irdtgsvlkl aaipddkavs raleiaigry gkvltiggtr
      241 hfqdkvaria aakgldvsft dgrlnhlyqq yvkeyeyvre rtdryrqadg tgradgragq
      301 qrggagyagg kprryrwhgy dasrnrgfha gisgypipkl sdsggigagr gqsasagsds
      361 lrgmperslv riqgrtqvll prdvsshleq qgsanyqavr rtihrtggva eirqmqavvg
      421 lvakpgkkpp gfrrgslrgm eglaeikiss aavveipknp epaqenerlt hslapidkyi
      481 aerqekidkk fdilnhrkyn psdsgvmlfr girnidgqal alfqpkevee ilvmsvtpyv
      541 srrlssvklg sevkvtptgq irpvkgrhr
//
LOCUS       WP_235220703             222 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235220703
VERSION     WP_235220703.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 222)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 222)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..222
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=24861
     Region          48..222
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaae rithdypept gakkaqlstv sdyfrnirth sihprvsvgy dfggwriaad
       61 yaryrkwnns kysvsikelq nqynkktenq engtfhaass lglsavydfk lndkfkpyig
      121 arvayghvrh sidstkkttg flttagarga aptvsspykn tqdahqesns irrvglgvia
      181 gvgfditpnl tldagyryhn wgrlentrfk theaslgvry rf
//
LOCUS       WP_235220712             268 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235220712
VERSION     WP_235220712.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 268)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 268)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..268
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=29786
     Region          84..268
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqpaknllfs sllfssllfp saaqaasedg grgpyvqadl ayaaerithd ypkptgakkg
       61 ttistvsdyf rnirthsihp rvsvgydfgg wriaadyary rkwndnkysv ntkkvgenkd
      121 nkkritvtqy lesenqengt fhaasslgls avydfdtgsr fkpyagvrva yghvkhqvrs
      181 vekettfvls ktlgvekpgi ikdaptrklp hhesrsissl gfgavagvgi ditpnltlda
      241 gyryhnwgrl entrfkthea slgmryrf
//
LOCUS       WP_235220713             207 aa            linear   BCT 02-MAR-2025
DEFINITION  MafB family polymorphic toxin, partial [Neisseria gonorrhoeae].
ACCESSION   WP_235220713
VERSION     WP_235220713.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 207)
  AUTHORS   Jamet,A., Jousset,A.B., Euphrasie,D., Mukorako,P., Boucharlat,A.,
            Ducousso,A., Charbit,A. and Nassif,X.
  TITLE     A new family of secreted toxins in pathogenic Neisseria species
  JOURNAL   PLoS Pathog 11 (1), e1004592 (2015)
   PUBMED   25569427
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018014.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06255.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         <1..207
                     /product="MafB family polymorphic toxin"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI."
     Region          <2..39
                     /region_name="MafB"
                     /note="Neisseria toxin MafB; pfam06255"
                     /db_xref="CDD:283833"
ORIGIN      
        1 taigklsyls drensireav drwiqenpna aetveavfnv aaakvaklak aakpgkaavs
       61 gdfsisyknf stvkpkviak gtingktfrd vnqsakigsp dsptliaqrv nakiqadgkp
      121 rpnatvansh aeigviqqay nagetkgasm tmtvsgkdvc gyckgdiaaa aqasglkslt
      181 vnatdnvtgk nktyywtpgm ksikerk
//
LOCUS       WP_235220353             256 aa            linear   BCT 02-MAR-2025
DEFINITION  pilin glycosylation ligase domain-containing protein, partial
            [Neisseria gonorrhoeae].
ACCESSION   WP_235220353
VERSION     WP_235220353.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 256)
  AUTHORS   Schulz,B.L., Jen,F.E., Power,P.M., Jones,C.E., Fox,K.L., Ku,S.C.,
            Blanchfield,J.T. and Jennings,M.P.
  TITLE     Identification of bacterial protein O-oligosaccharyltransferases
            and their glycoprotein substrates
  JOURNAL   PLoS One 8 (5), e62768 (2013)
   PUBMED   23658772
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 256)
  AUTHORS   Power,P.M., Seib,K.L. and Jennings,M.P.
  TITLE     Pilin glycosylation in Neisseria meningitidis occurs by a similar
            pathway to wzy-dependent O-antigen biosynthesis in Escherichia coli
  JOURNAL   Biochem Biophys Res Commun 347 (4), 904-908 (2006)
   PUBMED   16870136
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027197.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15864.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..>256
                     /product="pilin glycosylation ligase domain-containing
                     protein"
ORIGIN      
        1 msaettvsga rpaaklpiyi lpcflwigii pftfalrlkp spdfyhdaaa aaglivllfl
       61 tagkklfdvk ipaisfllfa maafwwlqar lmnliypgmn diaswvfill avsawacksl
      121 vahygqeriv tlfawsllig sllqscivvi qfagwentpl lqniivhrgq gvighigqrn
      181 nlghylmwgi lasaylngqr kipaalgaic limqtavlgl vnsrtiltyi aaialilpfw
      241 yfrsdksnrr tmlgia
//
LOCUS       WP_235220762             448 aa            linear   BCT 02-MAR-2025
DEFINITION  replication initiation factor domain-containing protein [Neisseria
            gonorrhoeae].
ACCESSION   WP_235220762
VERSION     WP_235220762.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 448)
  AUTHORS   Li,A.H., Silvestrini,B., Leone,M.G., Giacomelli,S. and Cheng,C.Y.
  TITLE     Cerebrin-50, a human cerebrospinal fluid protein whose mRNA is
            present in multiple tissues but predominantly expressed in the
            lymphoblastoid cells and the brain
  JOURNAL   Biochem Mol Biol Int 35 (1), 135-144 (1995)
   PUBMED   7735128
REFERENCE   2  (residues 1 to 448)
  AUTHORS   Balson,D.F. and Shaw,W.V.
  TITLE     Nucleotide sequence of the rep gene of staphylococcal plasmid pCW7
  JOURNAL   Plasmid 24 (1), 74-80 (1990)
   PUBMED   2270231
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014537.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02486.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..448
                     /product="replication initiation factor domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /calculated_mol_wt=50889
     Region          73..401
                     /region_name="NicK"
                     /note="DNA relaxase NicK [Replication, recombination and
                     repair]; COG2946"
                     /db_xref="CDD:442189"
ORIGIN      
        1 mgdkqgmtke vagvmteapa dgrkpatasn lppplsnrgg tetetagrvq evfecyetyi
       61 tdgkgnllgv plrrgvsdsa fidqitfsih edtffhvygl sfdlfddddf iraasakmee
      121 ifgfgiieka khsggrfyeg cwlmgtenaq ygrvhyggqr etmlveltav gcnaanigwe
      181 srlfdfltna irpkitrvdi akdffngeys pnqaredrnk glftchhvkp kgeclgsdwe
      241 eedeakmtsg ktygigsres skyvriyekg kqlgdktstw trfeiefkak divipfevlq
      301 npgeyfggay picerfaqka trihavkedk vvsadrclew vkkqfgraan glkfifpeld
      361 kaklfeliep shhklpksla leaydcaflk sqviheqpaf kpyndpyymy eyyenlekql
      421 eqqkhvnnee synnfiydkf arlpiswa
//
LOCUS       WP_235220778             448 aa            linear   BCT 02-MAR-2025
DEFINITION  replication initiation factor domain-containing protein [Neisseria
            gonorrhoeae].
ACCESSION   WP_235220778
VERSION     WP_235220778.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 448)
  AUTHORS   Li,A.H., Silvestrini,B., Leone,M.G., Giacomelli,S. and Cheng,C.Y.
  TITLE     Cerebrin-50, a human cerebrospinal fluid protein whose mRNA is
            present in multiple tissues but predominantly expressed in the
            lymphoblastoid cells and the brain
  JOURNAL   Biochem Mol Biol Int 35 (1), 135-144 (1995)
   PUBMED   7735128
REFERENCE   2  (residues 1 to 448)
  AUTHORS   Balson,D.F. and Shaw,W.V.
  TITLE     Nucleotide sequence of the rep gene of staphylococcal plasmid pCW7
  JOURNAL   Plasmid 24 (1), 74-80 (1990)
   PUBMED   2270231
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014537.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02486.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..448
                     /product="replication initiation factor domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /calculated_mol_wt=50843
     Region          73..401
                     /region_name="NicK"
                     /note="DNA relaxase NicK [Replication, recombination and
                     repair]; COG2946"
                     /db_xref="CDD:442189"
ORIGIN      
        1 mgdkqgmtke vagvmteapa dgrkpatasn lppplsnrgg tetetagrvq evfecyetyi
       61 tdgkgnllgv plrrgvsdsa fidqitfsih edtffhvygl sfdlfddddf iraasakmee
      121 ifgfgiieka khsggrfyeg cwllgtenaq ygrvhyggqr etmlveltav gcnaanigwe
      181 srlfdfltna irpkitrvdi akdffsgeys pnqaredrnk glftchhvkp kgeclgsdwe
      241 eedeakmtsg ktygigsres skyvriyekg kqlgdktstw trfeiefkak divipfevlq
      301 npgeyfggay picerfaqka trihavkedk vvsadrclew vkkqfgraan glkfifpeld
      361 kaklfeliep shhklpksla leaydcaflk sqviheqpaf kpyndpyymy eyyenlekql
      421 eqqkhvnnee synnfiydkf arlpiswa
//
LOCUS       WP_235220795             400 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease subunit S [Neisseria gonorrhoeae].
ACCESSION   WP_235220795
VERSION     WP_235220795.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 400)
  AUTHORS   Janscak,P. and Bickle,T.A.
  TITLE     The DNA recognition subunit of the type IB restriction-modification
            enzyme EcoAI tolerates circular permutions of its polypeptide chain
  JOURNAL   J Mol Biol 284 (4), 937-948 (1998)
   PUBMED   9837717
REFERENCE   2  (residues 1 to 400)
  AUTHORS   Bickle,T.A. and Kruger,D.H.
  TITLE     Biology of DNA restriction
  JOURNAL   Microbiol Rev 57 (2), 434-450 (1993)
   PUBMED   8336674
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01420.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..400
                     /product="restriction endonuclease subunit S"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=45513
     Region          30..187
                     /region_name="RMtype1_S_EcoEI-TRD1-CR1_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR), similar to S.EcoEI TRD1-CR1, S.EcoJA17PI
                     TRD1-CR1, S.EcoJA23PI TRD1-CR1, and S.StyLTIII TRD1-CR1;
                     cd17260"
                     /db_xref="CDD:341149"
     Site            order(106,109..110,112..113,142,144,150,154,157..158,
                     161..162,164..165,168..169,171..172,175..176,179,181..184)
                     /site_type="other"
                     /note="putative TRD-CR/TRD-CR interface [polypeptide
                     binding]"
                     /db_xref="CDD:341149"
     Region          218..352
                     /region_name="Methylase_S"
                     /note="Type I restriction modification DNA specificity
                     domain; pfam01420"
                     /db_xref="CDD:396139"
     Region          <304..384
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
     Site            order(314,317..318,320..321,341,343,349,353,356..357,378,
                     380..381)
                     /site_type="other"
                     /note="TRD-CR/TRD-CR interface [polypeptide binding]"
                     /db_xref="CDD:341132"
ORIGIN      
        1 mnhfkkqqiq nitdfnpreq lakgalaksv pmamlkefqr qitgyeikaf nggakfrngd
       61 tllakitpcl engktafvdi lddgevafgs tefivlrakn etnpeflyyf aispdfrkra
      121 iecmegtsgr qrvnenalkt lelpipepqi qqsiaavlsa ldkkialnkq intrleemak
      181 tlydywfvqf dfpdangkpy kssggdmvfd etlkreipkg wgsielqscl akipnttkil
      241 nkdikdfgky pvvdqsqdfi cgftndeksi lnpqdahiif gdhtrivklv nfqyargadg
      301 tqvilsnner mpnylfyqii nqidlssygy arhfkflkef kiilpskdis qkyneiantf
      361 fvkvrnnlkq nhhltqlrdf llpmlmngqv svrcsgardg
//
LOCUS       WP_235220878             635 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235220878
VERSION     WP_235220878.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 635)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 635)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 635)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..635
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=68382
     Region          7..379
                     /region_name="SCAD_SBCAD"
                     /note="Short chain acyl-CoA dehydrogenases and eukaryotic
                     short/branched chain acyl-CoA dehydrogenases; cd01158"
                     /db_xref="CDD:173847"
     Site            order(123,126,132,156,158,336,340,363)
                     /site_type="other"
                     /note="FAD binding site [chemical binding]"
                     /db_xref="CDD:173847"
     Site            order(128,133,156,199..203,268,271,280,284..285,287,290,
                     298,321,332,336,341,343,345..346,350,353..354,357..358,
                     360,367,370,373)
                     /site_type="other"
                     /note="homotetramer interface [polypeptide binding]"
                     /db_xref="CDD:173847"
     Site            order(132..133,236,239..240,243,271,363)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:173847"
     Site            363
                     /site_type="active"
                     /note="catalytic base [active]"
                     /db_xref="CDD:173847"
     Region          <436..556
                     /region_name="FixB"
                     /note="Electron transfer flavoprotein, alpha subunit FixB
                     [Energy production and conversion]; COG2025"
                     /db_xref="CDD:441628"
     Region          583..634
                     /region_name="NorV"
                     /note="Flavorubredoxin [Inorganic ion transport and
                     metabolism]; COG1773"
                     /db_xref="CDD:441379"
ORIGIN      
        1 mfyqtteahe alrqkvrafa eaevkpiafm ldqenrfpre avtkmgelgl mgipyetkyg
       61 gagldalsya iaveelsrvd ggtgvilsah tslgtypiya fgteeqkmky lpdlcsgkkv
      121 gafgltepna gsdaggtett aedkgdhwll ngekifitng geadtyvvfa vttpdigtrg
      181 isafivekgw egftfephyd kmgirssatc qlnfnnvkip kenllgkegq gfkiamstld
      241 ggrigiaaqa lgiaqgafea aveyskervq fgrpicqqqs iafkiadmat klrcarmlvy
      301 saaelkqahv pygmesamak myasdialev tndalqifgg sgylkgmeve rfyrdakitt
      361 iyegtneiqr vviashilgk agkaesapaq krgaetgerk kmilkdgtaq ekvdtlvaal
      421 kkdgydftvg ipmdtpiaqa ervvsagkgi gekknmklie dlakaagaai gssrpvaetl
      481 qyvplnryvg msgqkfkgnl yiacgisgag qhlkgikdas tivainidpg arifkncdyg
      541 ivgdvmeilp llakaldtge klpappmkkm kravpkkttp prkiyicngc gheydvlvgd
      601 pendvkpgta fkdlpegwvc phcgepvdqf ieiev
//
LOCUS       WP_235220944             154 aa            linear   BCT 02-MAR-2025
DEFINITION  prepilin-type N-terminal cleavage/methylation domain-containing
            protein [Oscillibacter valericigenes].
ACCESSION   WP_235220944
VERSION     WP_235220944.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019575.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07963.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..154
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /calculated_mol_wt=16654
ORIGIN      
        1 mskfksqkgf tlaellvvva iiavlvavai pvfsasqkka klaaddamir eayalmqyak
       61 iteeitidgt tktlsdcire gsfsgflyft ngatlsasad nayklqetdt tckqlpvipd
      121 ywchntghqk dsyimiciyg dsnspsvdmi gvsf
//
LOCUS       WP_235221010             364 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein [Oscillibacter valericigenes].
ACCESSION   WP_235221010
VERSION     WP_235221010.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021220.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09684.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..364
                     /product="phage tail protein"
                     /calculated_mol_wt=41194
     Region          163..287
                     /region_name="Tail_P2_I"
                     /note="Phage tail protein (Tail_P2_I); cl01817"
                     /db_xref="CDD:445563"
ORIGIN      
        1 madygirkyr lngallkrsl legfslsedg gvlrtegsgv hsvflpglds aqpdcawgrl
       61 slrcklgaes mltvrafasn qdavirnnev vriddflldp aiprtekerl ftladgmers
      121 gvkdvlltgq tgrwlwlwle vagaedgile dlrvyvpgdn ffrtfpqvyq tdndflqryl
      181 sifstmyqef qeeidalpel ldvdtapeal lpmfahwlgl etdealfspe elrrllkaap
      241 elmarkgtkw avekvvklfv eepvyivern llqsdkrhse dlygatpydf tvmvgrkmde
      301 klrlrlkfli dqfrparsrc rivfleecgg ldaftyldin gtvlqnapgs lddgkaltgm
      361 tylq
//
LOCUS       WP_235221024             611 aa            linear   BCT 02-MAR-2025
DEFINITION  MATE family efflux transporter [Oscillibacter valericigenes].
ACCESSION   WP_235221024
VERSION     WP_235221024.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01554.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..611
                     /product="MATE family efflux transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=65322
     Region          13..437
                     /region_name="NorM"
                     /note="Na+-driven multidrug efflux pump, DinF/NorM/MATE
                     family [Defense mechanisms]; COG0534"
                     /db_xref="CDD:440300"
     Region          480..609
                     /region_name="HATPase"
                     /note="Histidine kinase-like ATPase domain; cl00075"
                     /db_xref="CDD:469604"
ORIGIN      
        1 msqstpdggl rdsgqfistt frqallpail svggvmastl ansliagnll ghetlavlsi
       61 vnpvyfvytt igslagvgas slaawcigrd dregcdaavt laallslgvs lalavlgsll
      121 lepllgilga tgelleptrq ylriyifsgi gvagiyppyf llkldgwhrl smalflflav
      181 gcvglelfyv lalgmglagv algctvanla aaflgwaall wkgssfhlrs lsrawsrapr
      241 mlaagspsal nnlcgvlrgv alnllisala gqaglsafsv vsmagnlsiv finglcqttg
      301 pfvgvftser dgtslrqiek qalklgmlli vpvavllavl aapfcrlfgv sdpetldlaa
      361 pavrlfalsl plamlstiwm nyylsarrtw lanlltvcra ylflvlsarv lsgllglpgv
      421 wlgftaaevl swavlwaalt lfrrrhpelq gillldrrye eegrfvsfsv htsldeilda
      481 sqrisafcee nqldpersml islsleemlv sikehcfped etqtisiril ltpgedpdrp
      541 diilrircgg apfnpidyye rhkaetagem deldgllegl ddslgiamvl aaapvvdykt
      601 tfgvnnltil l
//
LOCUS       WP_235221091             263 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4358 domain-containing protein [Oscillibacter valericigenes].
ACCESSION   WP_235221091
VERSION     WP_235221091.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025628.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14270.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..263
                     /product="DUF4358 domain-containing protein"
                     /calculated_mol_wt=27474
     Region          <47..>127
                     /region_name="PRK11633"
                     /note="cell division protein DedD; Provisional"
                     /db_xref="CDD:236940"
     Region          148..245
                     /region_name="DUF4358"
                     /note="Domain of unknown function (DUF4358); pfam14270"
                     /db_xref="CDD:433825"
ORIGIN      
        1 mkkkllalll alsmlaalta cggkkddagt peqevtagdv dgtvdqpqet peageeasei
       61 qnadgstedg avetlpadpa ekaeggslpa dttqkpeskp vekpvqkpae kpaekpaqkp
      121 aekpaesksv dlaaffetfa sgenrpammq adgevldafy pgltaiktkq cgvytamisa
      181 avgelalvev ensadvqavk difqarinyq vgddenpgga wypqtiegwk ngsrivsngn
      241 yvmlialseg addvvnsfna lfa
//
LOCUS       WP_235221099             178 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6512 family protein [Oscillibacter valericigenes].
ACCESSION   WP_235221099
VERSION     WP_235221099.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039476.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20122.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..178
                     /product="DUF6512 family protein"
                     /calculated_mol_wt=19930
     Region          8..176
                     /region_name="DUF6512"
                     /note="Family of unknown function (DUF6512); pfam20122"
                     /db_xref="CDD:437954"
ORIGIN      
        1 mrkrlffwel ggflfaaaag vllhftydws ggnvlaavfs avnestwehm kllffplflc
       61 alvemcvlgk nypnfpavra vstlaglali pvlyytytgv lgrhllwadi avffladlga
      121 fwldfcllrr grlsepwqqv aglavlwala fcfvwctfrp pyvalwqdpv tglygiss
//
LOCUS       WP_235221127             276 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3021 family protein [Oscillibacter valericigenes].
ACCESSION   WP_235221127
VERSION     WP_235221127.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022896.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11457.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..276
                     /product="DUF3021 family protein"
                     /calculated_mol_wt=30830
     Region          17..151
                     /region_name="DUF3021"
                     /note="Protein of unknown function (DUF3021); pfam11457"
                     /db_xref="CDD:402870"
ORIGIN      
        1 mtergeisre lvrraaigfp fgaalvylvf llgglfgfpa pegtavpvvt aamaerwgsp
       61 itaalvqffw sgllgavlet aevpfrlerr talwsgvhfl ltaavfslag wqcrwfpyre
      121 twlcllglll lcyllmwavr yvgwrqdvra irkgvglpee peqpdcrkaa pyallaaave
      181 lllpwllrll dardvpvltg ifypflilpl fcffsswsla krcrrlwlvy pvlcalltlp
      241 cvfllynasa lfqvwvsaia altgglfgal wkksrk
//
LOCUS       WP_235221129             360 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase [Oscillibacter valericigenes].
ACCESSION   WP_235221129
VERSION     WP_235221129.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 360)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..360
                     /product="PfkB family carbohydrate kinase"
                     /calculated_mol_wt=37797
     Region          1..352
                     /region_name="PRK09954"
                     /note="sugar kinase"
                     /db_xref="CDD:182165"
ORIGIN      
        1 mtqrerqlln wieenplisq qeladkagit rssvavhisn lmkkgyitgk gyivhtapyv
       61 tvvggvnvdi ggqpagalvp qdsnpgtvgm slggvgrnia hnmsllgldv rmvtafgddl
      121 naqkiaascg elgidisrsp iipggrtsty lfindekgdm vlavsdmdiy rhltpqvlsq
      181 rqkllcgsqv vvidtnipae siawlaencp vpifadpvst akavklkpvl gklhtikpnr
      241 ieaellsgva itdeeslhka adalldtglh rvfislgsgg vfaadrsggr lrlpvlpadm
      301 vnttgcgdaf maaiawaylq gtdledtaka glaasaiaie sgetinpsms aealrkragl
//
LOCUS       WP_235221149             400 aa            linear   BCT 02-MAR-2025
DEFINITION  trypsin-like peptidase domain-containing protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235221149
VERSION     WP_235221149.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024758.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13365.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..400
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /calculated_mol_wt=42600
     Region          55..>238
                     /region_name="DegQ"
                     /note="Periplasmic serine protease, S1-C subfamily,
                     contain C-terminal PDZ domain [Posttranslational
                     modification, protein turnover, chaperones]; COG0265"
                     /db_xref="CDD:440035"
     Region          298..390
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cd00060"
                     /db_xref="CDD:438714"
     Site            order(320..321,338..339,341,362..363)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:438714"
ORIGIN      
        1 mkklrilgvt lltilmvglt avpamaafdr tvldsiiliy agapdkdglm nywrgtgffv
       61 gkegekpqyi itnchvvedf ilagkasggg elkvmygkdd eeeaylvdyd yekdvavlrl
      121 aeptdkrval mmqepsedml gttvhavgfp qaadltveav tsfsssdasv ttgsvsrflt
      181 esgtgrkliq tdaalsggns ggplttengt vigintagsa ldqnlfyavs vsevmplltr
      241 ndiaygvyse kgssnmtmii aiaavvilav vavvivmskk kkpakaqeaa gkkpipvvrs
      301 maaqhngqtv qlhnqpiqig rdpavcriay rdgtpgvssk hcqvyysegd nafvvtdlns
      361 tygtflsngq riapnvptkm apkssfylgd aentiyldle
//
LOCUS       WP_235221161             171 aa            linear   BCT 02-MAR-2025
DEFINITION  Gx transporter family protein [Oscillibacter valericigenes].
ACCESSION   WP_235221161
VERSION     WP_235221161.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 171)
  AUTHORS   Zhang,Y.W., Koyama,T., Marecak,D.M., Prestwich,G.D., Maki,Y. and
            Ogura,K.
  TITLE     Two subunits of heptaprenyl diphosphate synthase of Bacillus
            subtilis form a catalytically active complex
  JOURNAL   Biochemistry 37 (38), 13411-13420 (1998)
   PUBMED   9748348
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019099.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07456.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..171
                     /product="Gx transporter family protein"
                     /calculated_mol_wt=17708
     Region          4..161
                     /region_name="COG4769"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:443801"
ORIGIN      
        1 mklttkqltl cavltamala lsylenffpl slaipipgvk lglanivtvf alyvlgpgqa
       61 mlillarcll gavfagnmna lifsllggvs amlvmiglsr wrrlsvygvs vggaaahncg
      121 qvaaavltlg ntaplyylpi llgvslftga ltglvtaclf ralahtnlmr e
//
LOCUS       WP_235221283              86 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2508 family protein [Oscillibacter valericigenes].
ACCESSION   WP_235221283
VERSION     WP_235221283.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022165.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10704.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..86
                     /product="DUF2508 family protein"
                     /calculated_mol_wt=9599
     Region          5..70
                     /region_name="DUF2508"
                     /note="Protein of unknown function (DUF2508); pfam10704"
                     /db_xref="CDD:431448"
ORIGIN      
        1 mksifskktk sdpellalka elqeaqeels layrrfdqal dpelvescvy qisavkarcn
       61 yliraikare peptaaaqle gdtlwt
//
LOCUS       WP_235221259              79 aa            linear   BCT 02-MAR-2025
DEFINITION  ribosomal L7Ae/L30e/S12e/Gadd45 family protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235221259
VERSION     WP_235221259.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 79)
  AUTHORS   Koonin,E.V.
  TITLE     Cell cycle and apoptosis: possible roles of Gadd45 and MyD118
            proteins inferred from their homology to ribosomal proteins
  JOURNAL   J Mol Med (Berl) 75 (4), 236-238 (1997)
   PUBMED   9151207
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013417.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01248.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..79
                     /product="ribosomal L7Ae/L30e/S12e/Gadd45 family protein"
                     /calculated_mol_wt=8191
     Region          7..79
                     /region_name="Ribosomal_L7Ae"
                     /note="Ribosomal protein L7Ae/L30e/S12e/Gadd45 family;
                     cl00600"
                     /db_xref="CDD:469835"
ORIGIN      
        1 mltelasqek vigvkqsrka vregrakrvy lacdadpait epvavsceaa gipvetehtm
       61 aqlgracrit vgasvvavl
//
LOCUS       WP_235221363             365 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Oscillibacter valericigenes].
ACCESSION   WP_235221363
VERSION     WP_235221363.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 365)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 365)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025054.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13673.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..365
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=40547
     Region          4..198
                     /region_name="His_Phos_1"
                     /note="Histidine phosphatase superfamily (branch 1);
                     pfam00300"
                     /db_xref="CDD:459751"
     Region          228..355
                     /region_name="yhbS"
                     /note="Predicted N-acetyltransferase YhbS [General
                     function prediction only]; COG3153"
                     /db_xref="CDD:442387"
ORIGIN      
        1 mtsiylirha eaegnlyria qgqknsnltd rgwrqvrale krfadvhida vyssdlyrtc
       61 atasaiykpk glplhrvpal reinvgiweq rtwgdiyrcd peqmayfsre ftkwhiegae
      121 tpgqvldrml vavrkiaaen egrtvavfsh gyairlllaa aqgysleeag qtphgdntav
      181 slleaengel rvifrddnsh lqtpeflage kvrkranale pglwfqplrl eeqadwfadt
      241 vsaawsgprp fdreklmlda aerttlvgyl aerpvglvqv gpepgwitla ciredcrmrg
      301 fggqlvgqav llarsrggee lsvalgrdsg ahafftdygf rsagaaedgr vilvkniafd
      361 peflg
//
LOCUS       WP_235221369             617 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Oscillibacter valericigenes].
ACCESSION   WP_235221369
VERSION     WP_235221369.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024872.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13481.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..617
                     /product="AAA family ATPase"
                     /calculated_mol_wt=68785
     Region          52..>232
                     /region_name="PRK07078"
                     /note="hypothetical protein; Validated"
                     /db_xref="CDD:235927"
     Region          137..211
                     /region_name="TOPRIM_primases"
                     /note="The topoisomerase-primase (TOPRIM) nucleotidyl
                     transferase/hydrolase domain found in the active site
                     regions of bacterial DnaG-type primases and their
                     homologs. Primases synthesize RNA primers for the
                     initiation of DNA replication. DnaG type primases are...;
                     cd01029"
                     /db_xref="CDD:173779"
     Site            order(141..142,145,186,188,190)
                     /site_type="active"
                     /db_xref="CDD:173779"
     Site            order(141,186)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:173779"
     Site            order(143..144,150..151,161)
                     /site_type="other"
                     /note="interdomain interaction site"
                     /db_xref="CDD:173779"
     Region          280..551
                     /region_name="RepA"
                     /note="RecA-family ATPase [Replication, recombination and
                     repair]; COG3598"
                     /db_xref="CDD:442817"
ORIGIN      
        1 mtatdiqevl ryfdgvkkcg esqymarcpc hddkkqslsi grgqkgvvlk cqagcdtrdi
       61 iarvglkprd lfydsqekpq ekrrivatyd ypggvqkiry sdksfswrqp dgkggwiysr
      121 kgikpslyis gelsdgiavv egekdadnlh rlgwdavsga dgagpgkwkq eyteqlkgls
      181 vcifqdnddv gkayaqetaa alhnvcksvy lfdlskvwpd iplhgdvsdl vekfgdekac
      241 emiaqlatst pewepappee dpflscfktl dtfdeeeatw lvpgwipegq itlmaadggi
      301 gkttlwcnli aaissgrrci ldppdhtrva qkvafltted svrkklkkkl rlaganmsnv
      361 itpdfladkd gvlrglkfgt nemerfikhf rpslcvfdpv qgfvppdinm gsrnamrdcm
      421 aplislgeet gttfivvcht nkrkgafgrd riadsadlwd vsrsvmmagy tedqgiryls
      481 neknnycelq etllfsidsd gqaqaegrsw krdreytqes aanvsapkre dckdwvlhel
      541 deaggampsk dmddkatlag ysfrtlrrak edlkktgeik yfqtgggkek twhiqkasvf
      601 telpddtetp wsndlln
//
LOCUS       WP_235221389             362 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235221389
VERSION     WP_235221389.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 362)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..362
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=40853
     Region          9..358
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(15,17..18,20,41..43,99..101,147..149,174,178,
                     201..204)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187563"
     Site            order(119,149,174,178)
                     /site_type="active"
                     /db_xref="CDD:187563"
ORIGIN      
        1 mrkidlknkt vfvtgsagfi gsnlvlellr tqspvsivgl dnmndyydvs ikewrlseie
       61 kcaaehhdaa yqfymgdlad qdllnrifte hrpeivvnla aqagvrysit npdayiqsnl
      121 vgfyhileac rhsydngerg vehlvyasss svygsnqkvp ystddkadnp vslyaatkks
      181 nellahaysk lydlpstglr fftvygpagr pdmayfgftd kllkgekiqi fnygnckrdf
      241 tyiddivegv irvmqgaper rngedglpvp pyaiynignn qpenlldfvt ilqeelirak
      301 vlpadydfea hkelvpmqpg dvpvtyadtt alerdfgfkp ntglrdglrk faewykdfyl
      361 hd
//
LOCUS       WP_235221396             382 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Oscillibacter valericigenes].
ACCESSION   WP_235221396
VERSION     WP_235221396.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..382
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=43867
     Region          7..365
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mdqdmkklcf vttvsmtmka fvipiavylh ghtdwditlv cdedpefrks lppylhyhav
       61 pmargihlsg ikamlemekf freehfdlvq yatpnaslya amaakrarip vrlycqwgla
      121 yvgfrgikrw ifkqeekyvc wlstwiepds rsnldfahre glyppdqgsv vwngsavgvn
      181 lekfditkre pfrdeirrky hipaeafvfi fvgritrdkg vnelfeafsq fddawlmmvg
      241 wnevdqtvnr elyqkaqsss rvvftgftde vekylsaadc yllpsyregf gmgvieaeam
      301 glpvvitdip gptdamvehe tgivvqkans kelhramkri cenqeeakrm gtkgaefaag
      361 mfeqkqlfay ilrdrkallk qs
//
LOCUS       WP_235221489              91 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6881 domain-containing protein [Oscillibacter valericigenes].
ACCESSION   WP_235221489
VERSION     WP_235221489.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF045463.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21812.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..91
                     /product="DUF6881 domain-containing protein"
                     /calculated_mol_wt=10843
ORIGIN      
        1 mqyymiewdh aeedepwrly leldsrgcpr rkvevyrvgl yqpyddldep ptdprqlagg
       61 dgdvtdlnrm qfddiweqsr qmpdgfmgmf f
//
LOCUS       WP_235221492             391 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 N-terminal domain-containing protein
            [Oscillibacter valericigenes].
ACCESSION   WP_235221492
VERSION     WP_235221492.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 391)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00933.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..391
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=41560
     Region          64..378
                     /region_name="Glyco_hydro_3"
                     /note="Glycosyl hydrolase family 3 N terminal domain;
                     cl29895"
                     /db_xref="CDD:421946"
ORIGIN      
        1 mrrllaamlt llvlfslaac gapptpeepv ppvqeelpav eppppatepe ppadpveell
       61 tsmtleekvg qlffvrcpae naaedvsayh lggyilfgrd tkdktadali qtiqsyqdaa
      121 avplligvde eggtvvrvss nphlraskfq spqklfaggg meavtadare kdilldalgf
      181 nvnlapvadv stdpgdfiyn rafgrdaaat adyvsavtaq maadgmgsvl khfpgygnna
      241 dthtgiamdd rpyedfvngd flpflagmea ggsttavlvf hnivecmdae lpaslspnvh
      301 rilreeldfd gvvmtddlam davaayaedg avavmaleag ndlvlttdyr tqipkvkeav
      361 engeldesvi dtacrrvlqw kqalglleav i
//
LOCUS       WP_235221505             740 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein
            [Oscillibacter valericigenes].
ACCESSION   WP_235221505
VERSION     WP_235221505.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 740)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..740
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /calculated_mol_wt=79871
     Region          9..723
                     /region_name="pbp2_mrdA"
                     /note="penicillin-binding protein 2; TIGR03423"
                     /db_xref="CDD:274573"
ORIGIN      
        1 mdpknqhirl yalagflavi llvylgilfn tqvldheeyl aksvhsiake etvsasrgii
       61 tdrsgrtlvs nssaydlsfd tsllkdgedv nqsilrliql cqerdmtwvd nlpirteapy
      121 aytvdqlsdt qrgrfltylr slekakktlg nyllehpelv sepeeaqtag dgsetaltpe
      181 kqadallkrf pssalteqvl nsagltsaal lemlceefqi petlsmreqr qvmgvryela
      241 lrrangytsc vltedidtef islvtdgrya gakvttssqr eyqttyaahi lgtvgaissk
      301 eelaslgegy rwddmvgksg veaafeqylk gtdgtrvvsv ndegkitgqy yetepepgst
      361 veltidlelq ktvedalaet vskmtaedgn akrgagaavv kvgtgevlal asyptydlst
      421 yrqpevnkal tedparpffn ratqgtyapg stfkpltala aleegavtlt ekindpgvwy
      481 ypemiegtep fkahcwkrsg hgklnvtqai tnscnvffye mgyrlgidal nkyasafglg
      541 entgieigds agvlagreer easggvwygg ettqaaigqs dnlftplqla nyiatlvsgg
      601 khcqahllka vkaydnsevv avgntqpvnt vefsdstlqa ikegmlgytq pggmvyssfk
      661 dctvtagakt gtaqlggnvk nngvfvcfap ydepeialai vieqgdagaa lastavtiln
      721 syfsadeigt avigenqllp
//
LOCUS       WP_235221541             197 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-dependent oxidoreductase [Oscillibacter valericigenes].
ACCESSION   WP_235221541
VERSION     WP_235221541.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 197)
  AUTHORS   Li,R., Bianchet,M.A., Talalay,P. and Amzel,L.M.
  TITLE     The three-dimensional structure of NAD(P)H:quinone reductase, a
            flavoprotein involved in cancer chemoprotection and chemotherapy:
            mechanism of the two-electron reduction
  JOURNAL   Proc Natl Acad Sci U S A 92 (19), 8846-8850 (1995)
   PUBMED   7568029
  REMARK    Erratum:[Proc Natl Acad Sci U S A 1995 Nov 7;92(23):10815]
REFERENCE   2  (residues 1 to 197)
  AUTHORS   Fischl,A.S. and Kennedy,E.P.
  TITLE     Isolation and properties of acyl carrier protein phosphodiesterase
            of Escherichia coli
  JOURNAL   J Bacteriol 172 (9), 5445-5449 (1990)
   PUBMED   2168383
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014573.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02525.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..197
                     /product="NAD(P)H-dependent oxidoreductase"
                     /calculated_mol_wt=21578
     Region          1..196
                     /region_name="AzoR"
                     /note="FMN-dependent NADH-azoreductase [Energy production
                     and conversion]; COG1182"
                     /db_xref="CDD:440795"
ORIGIN      
        1 mkllfvdcci sqrgensrtk kladtflaaf rekhpeaeie tvlpetllal rpfdaemlne
       61 rdalasvgaw dapvfslarq frgadgivva apfwdlsfpa alrtyieyis angltyhyde
      121 tgchgdckar qlvyltsggd feredsvgvt ywrqlaamfg iprfdyvfag gldacpdtae
      181 etltascala rslaaes
//
LOCUS       WP_235221571             385 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235221571
VERSION     WP_235221571.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 385)
  AUTHORS   Ren,J., Sainsbury,S., Nettleship,J.E., Saunders,N.J. and Owens,R.J.
  TITLE     The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals
            a novel protein fold incorporating a helix-turn-helix motif
  JOURNAL   Proteins 78 (7), 1798-1802 (2010)
   PUBMED   20196080
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013540.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01381.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..385
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=42988
     Region          1..>54
                     /region_name="aMBF1"
                     /note="Archaeal ribosome-binding protein aMBF1, putative
                     translation factor, contains Zn-ribbon and HTH domains
                     [Translation, ribosomal structure and biogenesis];
                     COG1813"
                     /db_xref="CDD:441418"
     Region          208..257
                     /region_name="XRE"
                     /note="DNA-binding transcriptional regulator, XRE-family
                     HTH domain [Transcription]; COG1476"
                     /db_xref="CDD:441085"
ORIGIN      
        1 mlfnhiieda drcgnllsss rtraelsrkt msmalgvses tikawengqg sptlygilew
       61 frtvgespfr pmldffwpdv fagltakntd deireagrfy fakvagpkei qklhylifgk
      121 hgsewsglld macahihtsl nsryrvaeii qvsyemsaan glalkppeie anrplllsai
      181 aaakeasvfs akngyaicfs ntdtsamlar armdsgatqe elakalgktq qtiqkwetny
      241 npsfldvctw frvlnmpawt yihcmlypae rltflegdek rrrevvdhla sagsaelrkl
      301 fylvagthgs nwlavlemmf ehicsplaqr visarsvlig yqlekgnrql letdhimpdi
      361 enlnrcialg teaakkglpa ykmtv
//
LOCUS       WP_235221587             227 aa            linear   BCT 02-MAR-2025
DEFINITION  PHP domain-containing protein [Oscillibacter valericigenes].
ACCESSION   WP_235221587
VERSION     WP_235221587.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 227)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014826.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02811.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..227
                     /product="PHP domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=25363
     Region          1..187
                     /region_name="YciV"
                     /note="5'-3' exoribonuclease TrpH/YciV (RNase AM),
                     contains PHP domain [Nucleotide transport and metabolism];
                     COG0613"
                     /db_xref="CDD:440378"
     Region          165..218
                     /region_name="PHP_C"
                     /note="PHP-associated; pfam13263"
                     /db_xref="CDD:433069"
ORIGIN      
        1 mykiethlht thvskcghlt apvlakayke agydaiavtd hynrdtvkyl nldlsssdgl
       61 lekfldgfhr medacgelgi rvykgaelrf decendyllf gwhdellrdm prnlkmsvve
      121 fsklaredga lliqahpyrk kctpaiacyl dgvevinahp rhdshndrak eyaeqfgliq
      181 lagsdchqtp diarsgilsd tlpadtfela alirsgnytl ieppaae
//
LOCUS       WP_235221596             664 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase [Oscillibacter valericigenes].
ACCESSION   WP_235221596
VERSION     WP_235221596.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 664)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..664
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=74263
     Region          11..>245
                     /region_name="MprF2"
                     /note="Lysylphosphatidylglycerol synthetase MprF,
                     lysyl-tRNA-binding C-terminal domain [Lipid transport and
                     metabolism]; COG2898"
                     /db_xref="CDD:442143"
     Region          252..534
                     /region_name="LTA_synthase"
                     /note="Lipoteichoic acid synthase like; cd16015"
                     /db_xref="CDD:293739"
     Site            order(259,301,420,483..484)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293739"
     Site            order(259,301,420,484)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293739"
     Site            order(354,356..359,362)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:293739"
ORIGIN      
        1 mkrsekapdt garrefrvfl yfvllalavt liveafnhka ftdgpasllr yltrspmafl
       61 tnaailltal apamflrrrv fwcgvvsilw laggaangfi linrmtpftv adltvfntgl
      121 dtlpnylskp ylillgagva laavglgvlf wkgprnrrsg rrrllaglaa vlvsagalag
      181 swalafqldq lstvfsnlaf ayedygfsyc ffqtwlnrgi rrpagydage farireliak
      241 dareaepqed vnvvmvqles fidpkeiqgl vmstdpvpnw talkencssg yltmpvvgag
      301 tansecevlt gmstrlfgpg eypyrtclmd ktvesvaydl kehgyaahai hnhraafysr
      361 nrvyadlgfd dftgleympk vsvtmknwak drvltsqiek aldttpdgpd lvftvtvqsh
      421 gkyprervle dpavrvltcp deeyryaley yvdqvrqvdq figeltemls rrqertllvl
      481 ygdhlpalgl qgkdmasgsl ykteyviwdn fglkqededl yayqlsaaal grigvtdgvm
      541 nafhqscree psyrrdlkll qydvlygkny lyggqtpyqp telqmgmepi titglwekdg
      601 awyaagenfs pycqvvrdgk rleteylspy llrltedpet tdagelgiqv vdqhnevlse
      661 tgte
//
LOCUS       WP_235221608             256 aa            linear   BCT 02-MAR-2025
DEFINITION  MobA/MobL family protein [Oscillibacter valericigenes].
ACCESSION   WP_235221608
VERSION     WP_235221608.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015354.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03389.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..256
                     /product="MobA/MobL family protein"
                     /calculated_mol_wt=29945
     Region          1..199
                     /region_name="MobQ"
                     /note="MobQ family relaxase; NF041496"
                     /db_xref="CDD:469384"
ORIGIN      
        1 manyhlevnv isrgkgqsvt rranyisgqr lydsyynety yrhrddvlfc giflpehapp
       61 efqnlqplct eieraekrkd artarefics lpnelsklan irivseyiha nflsrglcav
      121 aaihaginqt dparnnphvh mivstravne egfcpkkdre ldrsenmeiw reqweqvqnr
      181 ayarnglpir vsheslemqg khdweptihl sridwqrekn gertangnkk reiqarnear
      241 qrqfcqmear eiditr
//
LOCUS       WP_235221609             601 aa            linear   BCT 02-MAR-2025
DEFINITION  type IV secretory system conjugative DNA transfer family protein
            [Oscillibacter valericigenes].
ACCESSION   WP_235221609
VERSION     WP_235221609.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 601)
  AUTHORS   Lu,J., Wong,J.J., Edwards,R.A., Manchak,J., Frost,L.S. and
            Glover,J.N.
  TITLE     Structural basis of specific TraD-TraM recognition during F
            plasmid-mediated bacterial conjugation
  JOURNAL   Mol Microbiol 70 (1), 89-99 (2008)
   PUBMED   18717787
REFERENCE   2  (residues 1 to 601)
  AUTHORS   Gunton,J.E., Gilmour,M.W., Baptista,K.P., Lawley,T.D. and
            Taylor,D.E.
  TITLE     Interaction between the co-inherited TraG coupling protein and the
            TraJ membrane-associated protein of the H-plasmid conjugative DNA
            transfer system resembles chromosomal DNA translocases
  JOURNAL   Microbiology (Reading) 153 (Pt 2), 428-441 (2007)
   PUBMED   17259614
REFERENCE   3  (residues 1 to 601)
  AUTHORS   Schroder,G., Krause,S., Zechner,E.L., Traxler,B., Yeo,H.J.,
            Lurz,R., Waksman,G. and Lanka,E.
  TITLE     TraG-like proteins of DNA transfer systems and of the Helicobacter
            pylori type IV secretion system: inner membrane gate for exported
            substrates?
  JOURNAL   J Bacteriol 184 (10), 2767-2779 (2002)
   PUBMED   11976307
REFERENCE   4  (residues 1 to 601)
  AUTHORS   Dougherty,B.A., Hill,C., Weidman,J.F., Richardson,D.R., Venter,J.C.
            and Ross,R.P.
  TITLE     Sequence and analysis of the 60 kb conjugative,
            bacteriocin-producing plasmid pMRC01 from Lactococcus lactis
            DPC3147
  JOURNAL   Mol Microbiol 29 (4), 1029-1038 (1998)
   PUBMED   9767571
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014581.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02534.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..601
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=67755
     Region          78..444
                     /region_name="VirD4"
                     /note="Type IV secretory pathway, VirD4 component,
                     TraG/TraD family ATPase [Intracellular trafficking,
                     secretion, and vesicular transport]; COG3505"
                     /db_xref="CDD:442728"
     Region          <316..599
                     /region_name="PRK13700"
                     /note="conjugal transfer protein TraD; Provisional"
                     /db_xref="CDD:184256"
ORIGIN      
        1 msqkgsngkk iykhfpdrvd lnrgfctphq lcldadapgf ffgdadrrgy gsyvgmpqga
       61 dgnilviggn gsgkssgivk ptletwrgai catdikgels ayytevyqra lksgkemrpy
      121 iifdptqpdg lsydpfwwll qddmtnlysn ikdivlamip kapndpqpfw ieaeqsiltv
      181 gliyyfklgl sfsesicall rndlyvffke mkssdtgsdl iipllgmfak mkpetlacid
      241 relrdklhpf aadpyishaf rgeregaacf nwrhldqvnv flripqnrid qwggavnlmy
      301 tqlirylecr perysaegqn nvqtlvlmde fprfgklelf antlptlrsk nvniclvvqs
      361 laqldmlygt nerktifdnc qyqailrand aetqeilsrl igstsvlles vsrnldesge
      421 ktgystqrsi greprvfphe lstltdvlli spcgvsrlek rqpsqnldtn lddhpkisfn
      481 kkgvkmlmve ertknaieki arnkkaqyla aknelnrkeh edklrkfivg elvitafpel
      541 lnivpaeska etesrfrple qflaalaadp vftgkieqaf aaqtvqcvsg qrepatnkev
      601 f
//
LOCUS       WP_235221624             138 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Oscillibacter valericigenes].
ACCESSION   WP_235221624
VERSION     WP_235221624.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 138)
  AUTHORS   Yeo,C.C. and Poh,C.L.
  TITLE     Characterization of IS1474, an insertion sequence of the IS21
            family isolated from Pseudomonas alcaligenes NCIB 9867
  JOURNAL   FEMS Microbiol Lett 149 (2), 257-263 (1997)
   PUBMED   9141667
REFERENCE   2  (residues 1 to 138)
  AUTHORS   Solinas,F., Marconi,A.M., Ruzzi,M. and Zennaro,E.
  TITLE     Characterization and sequence of a novel insertion sequence,
            IS1162, from Pseudomonas fluorescens
  JOURNAL   Gene 155 (1), 77-82 (1995)
   PUBMED   7698671
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01695.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..138
                     /product="ATP-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=15792
     Region          <4..134
                     /region_name="IS21_help_AAA"
                     /note="IS21-like element helper ATPase IstB; NF038214"
                     /db_xref="CDD:439516"
ORIGIN      
        1 mtssgktylc nalcvsaiqq fktvryiran ilmleleqar lqttyldyvs slakldllai
       61 ddfglmdldl dkcrdlfevi dgrdgrksti ivsqfpihtw fdlfqehtya daclaritdk
      121 rhsyrlemng ismrdavk
//
LOCUS       WP_235221676             784 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235221676
VERSION     WP_235221676.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 784)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..784
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..784
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=88109
     Region          133..366
                     /region_name="WcaG"
                     /note="Nucleoside-diphosphate-sugar epimerase [Cell
                     wall/membrane/envelope biogenesis]; COG0451"
                     /db_xref="CDD:440220"
ORIGIN      
        1 madeiltekd tfsenksdma dsaaaasepr gdsqerfvir papaadpfql edsiyaedai
       61 pyaeavaree aankiqvsca micgnislls eeaiqkaadt ynlviagkgc apgrssrrvh
      121 yydtipteek fhqlfdafei davwyisgya dgqdglhdem kildnivdac vknvvskliv
      181 vtsiaslnfq pkydimgqvv grayasgeaf avaqlenfvr yctkshgikt iilrtpyias
      241 elndsnflgq ifsnmlhgek mvfpyrpenk idflsasdlm ellldisees sdstatysva
      301 sgyhytwwdl eneilkinpd tvieyedkvn fisvqsysie lkkkygfipm dnvlstfada
      361 ffaykknaqk nswakalvqk irdkiltnav gyielivffl vaeflvrkta ssvyfkyvdi
      421 rlfyvlimgt tygtmtgila gilagialff gyrsigvngt mlfynienwl pfviylitgs
      481 itgyistvhr qkneflkken dllrdkylfl ndvyhgaven kseykrqilg ykdsfgvifq
      541 avrkldsvlp qeifmnsiqt megilknhsi aiytvdswqk ygrlaassgd iltdlpksle
      601 iasvrpvydt vlagntwknt dllpdlpmya ygicekdtvs llifvyhatp eqmslyymnl
      661 fsilcslikl sfiraleyqq aieqekyypg tpivipsyft eilnaqknla eaglssyali
      721 rfdskdkeyi ssslkglvrn ndivgadddg slflvltqtn rkaisivger ldkkglkyei
      781 isgn
//
LOCUS       WP_235221944             255 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Oscillibacter valericigenes].
ACCESSION   WP_235221944
VERSION     WP_235221944.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024872.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13481.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..255
                     /product="AAA family ATPase"
                     /calculated_mol_wt=28322
     Region          23..>162
                     /region_name="RepA"
                     /note="RecA-family ATPase [Replication, recombination and
                     repair]; COG3598"
                     /db_xref="CDD:442817"
ORIGIN      
        1 mtdnqndlit itagelmdrq flprhsvven flpagtfils gqpkigksfl mlmlcwcvse
       61 gkpflgfetr qsevlyltle dtdariqerl armfgtdwdg tklhltfrtt lsgndliqql
      121 enfvfdhpet rlividtlyl areggdgtay syssdykdir pfklftgrly scgaggvfgr
      181 dnscerrige aagrnlytkd ergpgpqsaa avgpaafrgc gdqgalrlks rtasysyrpk
      241 itqhfvtqag klsvy
//
LOCUS       WP_235221989             504 aa            linear   BCT 02-MAR-2025
DEFINITION  S-layer homology domain-containing protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235221989
VERSION     WP_235221989.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 504)
  AUTHORS   Mesnage,S., Fontaine,T., Mignot,T., Delepierre,M., Mock,M. and
            Fouet,A.
  TITLE     Bacterial SLH domain proteins are non-covalently anchored to the
            cell surface via a conserved mechanism involving wall
            polysaccharide pyruvylation
  JOURNAL   EMBO J 19 (17), 4473-4484 (2000)
   PUBMED   10970841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012613.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00395.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..504
                     /product="S-layer homology domain-containing protein"
                     /calculated_mol_wt=51895
     Region          34..309
                     /region_name="NHL"
                     /note="NHL repeat unit of beta-propeller proteins;
                     cl18310"
                     /db_xref="CDD:302697"
     Region          34..81
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          94..129
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          146..179
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          183..221
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          245..274
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          321..360
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          385..423
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          449..490
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
ORIGIN      
        1 mkrkiislll aaamaltvsa aaltpadfsg galsgvaadg gallvtdtfn kvvwrvedge
       61 vsrfagqisv sgldgepigk yddgtlstal fmepwaiapf ldgwavsdaa anviryidss
      121 gvrtaagsgk aggadgvaer vsfdyptglt agdngelyia dtgngsirrm dakgkvttil
      181 tglsdptglc wadgslyvae tgrsrilrvt ngrmevlage stslgggeye ggytdgpaak
      241 arfdhpqgva vgedgtvyia dtgnhavrrl angrvttmas akqtpeapvq prgmlvqgnt
      301 lvvtdlfaqn lltlstvpvs yrdvpagawc edavrqater gltsgtgngy ftpnapvtra
      361 mfvvmlsrlh qgtdggtvid gvsafadvpa dawydsaarw aadqqivlgd ngsfrpsagi
      421 trealaally ryagsvgldt saradlsrfp dasgvsayaa damswavaeg ilggktdgtl
      481 apkgtatraq takmlvsfmd afgi
//
LOCUS       WP_235221990             605 aa            linear   BCT 02-MAR-2025
DEFINITION  CHASE2 domain-containing protein [Oscillibacter valericigenes].
ACCESSION   WP_235221990
VERSION     WP_235221990.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 605)
  AUTHORS   Zhulin,I.B., Nikolskaya,A.N. and Galperin,M.Y.
  TITLE     Common extracellular sensory domains in transmembrane receptors for
            diverse signal transduction pathways in bacteria and archaea
  JOURNAL   J Bacteriol 185 (1), 285-294 (2003)
   PUBMED   12486065
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017076.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05226.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..605
                     /product="CHASE2 domain-containing protein"
                     /calculated_mol_wt=64479
     Region          18..317
                     /region_name="CHASE2"
                     /note="CHASE2 domain; pfam05226"
                     /db_xref="CDD:428378"
     Region          233..598
                     /region_name="AcyC"
                     /note="Adenylate cyclase, class 3 [Signal transduction
                     mechanisms]; COG2114"
                     /db_xref="CDD:441717"
ORIGIN      
        1 mkrsirtlaa slavaalfta vagfglldsp dgavsdalyq rpaasdgeiv vigmdqrald
       61 algpmpwprs ymadainyln adpeqapavi gidvlyvges adpdgdaala daaeaggnvv
      121 taaaatfgsg lvegtdgfym dtravlawde pfdalaavtd tghinamadn dgiirhally
      181 vdtpagervn sfartiyery atyheldvts lpetedgffy lpystapggy ydgvsfldvl
      241 dgavdpsyfa gkivligpya aglqdeyrta idhaapmygi eiqanqiday rsgflprevs
      301 ralqlallfl isalaliwfh drrvgpallg wlavsagwvg lcaalyragw vlhvlwvpla
      361 vtvlfigsva vnyiraqkek rrvtdtfgry vdpailkell vqggsaedlg gkmfdiavlf
      421 vdirgfttms ealppttive ilnryltltt ecimryhgtl dkfvgdctma fwnaplpqed
      481 avylaccaam dmvegskalg eeleakygrt vsfgvgvhvg pavvgnigap qrmdytaigd
      541 tvntsarlea napggkvlis ravadalgdr aettslggsi klkgkaegfe tltldslkrn
      601 crrsg
//
LOCUS       WP_235222004             427 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Oscillibacter valericigenes].
ACCESSION   WP_235222004
VERSION     WP_235222004.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..427
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=47744
     Region          <114..>337
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mkvavlsmfn glsstyslvn vvaehlkmll dagiptkvlv sedcpdsdrs gifaderlew
       61 vkitnrldgr piqwhdysqp sgevhesfya eaeviaqslq aalsdvdvci mhdihyqgwr
      121 lvhnvavrka qeglphvrfi afthsapvnr ppapqypfsc rytamphtiy vyptqsgipa
      181 larqydvpeg kcrvvsnsln llsamsadia avhsrmdllt pdflivypgr fttgkrfekv
      241 aalagaikkr tertvkvvfc dfpcmdtdav kykliiratg evcgldgedm lftsdlgyqs
      301 gfprgavlel ftlsnlficp sysesfgltv leaasrgnfl vlneavpale elgkkfgayf
      361 mrwdarnfgf dtketyqpse mgylenhavk iadrmrdnpv lrakaltrqf fspgwvwynq
      421 lqpllea
//
LOCUS       WP_235221393             438 aa            linear   BCT 02-MAR-2025
DEFINITION  O-antigen polysaccharide polymerase Wzy [Oscillibacter
            valericigenes].
ACCESSION   WP_235221393
VERSION     WP_235221393.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 438)
  AUTHORS   Fratamico,P.M., Yan,X., Liu,Y., DebRoy,C., Byrne,B., Monaghan,A.,
            Fanning,S. and Bolton,D.
  TITLE     Escherichia coli serogroup O2 and O28ac O-antigen gene cluster
            sequences and detection of pathogenic E. coli O2 and O28ac by PCR
  JOURNAL   Can J Microbiol 56 (4), 308-316 (2010)
   PUBMED   20453897
REFERENCE   2  (residues 1 to 438)
  AUTHORS   Samuel,G. and Reeves,P.
  TITLE     Biosynthesis of O-antigens: genes and pathways involved in
            nucleotide sugar precursor synthesis and O-antigen assembly
  JOURNAL   Carbohydr Res 338 (23), 2503-2519 (2003)
   PUBMED   14670712
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025654.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14296.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     gene            1..438
                     /gene="wzy"
     Protein         1..438
                     /product="O-antigen polysaccharide polymerase Wzy"
                     /calculated_mol_wt=48723
     Region          41..423
                     /region_name="DUF4271"
                     /note="Domain of unknown function (DUF4271); cl40682"
                     /db_xref="CDD:454814"
ORIGIN      
        1 mmkidrftfl flldgivalf allfgtsmnv rmaaaiaavt ivlilisiyt iydhrlslss
       61 vlllytiatq fglvipytif grevlsnyhd ytlrflrssm lvkaillgnf aiicfetakr
      121 mtavkrvkrp eknrpadggm nqkmfrasaa gflivllyfa yhvlfgstrl vstyegfmrs
      181 saytsgiyay ilivfyassi ylaasgtire rktgwflwll ivlifafngn kgeflyalla
      241 viglqgslgk kidvklills afllffvips itllrsvgia gnlgsakwdf vsvftetgmq
      301 irtsvyvleg ldhktisplw gmsyiqpvin mivpfshkia tsdirkmfpg ygfnqviesy
      361 lnlgvagvag yfglvgyvis kaenelksri dlaylgtvtc vlinasrnyf afvpgqiliv
      421 tviyylikkt rvggrnev
//
LOCUS       WP_235222082             374 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2812 domain-containing protein [Oscillibacter valericigenes].
ACCESSION   WP_235222082
VERSION     WP_235222082.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022641.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11193.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..374
                     /product="DUF2812 domain-containing protein"
                     /calculated_mol_wt=42036
     Region          20..128
                     /region_name="DUF2812"
                     /note="Protein of unknown function (DUF2812); pfam11193"
                     /db_xref="CDD:431715"
ORIGIN      
        1 mrkkkyslkp agdwetgale awleqeaakg wrltawvswf avleraepap crvriqprep
       61 earenwearl evyrdlgwty aaqmgdyeay ycddpaaael esdpvaqkwa wdkslksalr
      121 qgwlelflfa alavlilylw lsagnkvewf lkmgpelvlv gllcavgvfg gvrkllgvwr
      181 trdlldagva pphtgnwrns rrlmavtsfl lllfwtvhlv glgmtgnaay rsldnpelpy
      241 vaaevldpal tssiredssf gtleraplap arysvreffp eqkqvtttyd rlifsalagp
      301 lyreklekyr eqwpdaaltv pdragfdqav llesgevsvl larrgkavlt vwtntgadls
      361 ahlddyadll tdfc
//
LOCUS       WP_235222083             376 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2812 domain-containing protein [Oscillibacter valericigenes].
ACCESSION   WP_235222083
VERSION     WP_235222083.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022641.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11193.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..376
                     /product="DUF2812 domain-containing protein"
                     /calculated_mol_wt=42481
     Region          19..124
                     /region_name="DUF2812"
                     /note="Protein of unknown function (DUF2812); pfam11193"
                     /db_xref="CDD:431715"
ORIGIN      
        1 mkwnrwrdvp pcstydipgm eewlsrqaar greltdwcnf rnapsrdcrf alepaekgqy
       61 kpteeqreay geagwefvcs sslflvwrst rpdamplrtd ptadswaygr lwervrnstl
      121 wailallgvl ifwirqggnc fflstiragg twkfllflav eavtaahlll dlrcfrqlld
      181 slrcgfpmpr rrirprrral llcvplalvl lnlvslakiv tgsagvplse dpvpyieaet
      241 lggrggnvtv erredllges vtvcqgepdv vwkrdpqpsn lpgtdilriv cdtqqetvtl
      301 rlpalagpll reftvrieee ageppqpige ntyylldeng iqhltfrkdg qvfcirtnap
      361 adlrahlndf talltd
//
LOCUS       WP_235222119              67 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfurtransferase TusA family protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235222119
VERSION     WP_235222119.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 67)
  AUTHORS   Ikeuchi,Y., Shigi,N., Kato,J., Nishimura,A. and Suzuki,T.
  TITLE     Mechanistic insights into sulfur relay by multiple sulfur mediators
            involved in thiouridine biosynthesis at tRNA wobble positions
  JOURNAL   Mol Cell 21 (1), 97-108 (2006)
   PUBMED   16387657
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013379.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01206.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..67
                     /product="sulfurtransferase TusA family protein"
                     /calculated_mol_wt=7071
     Region          1..67
                     /region_name="SirA_like_N"
                     /note="a protein of unknown function with an N-terminal
                     SirA-like domain. The SirA, YedF, YeeD protein family is
                     present in bacteria as well as archaea. SirA (also known
                     as UvrY, and YhhP) belongs to a family of a two-component
                     response regulators that...; cd03421"
                     /db_xref="CDD:239513"
     Site            order(2..3,6,9..12,14)
                     /site_type="other"
                     /note="CPxP motif"
                     /db_xref="CDD:239513"
ORIGIN      
        1 midtrglscp tpvvmvqkai kdgaparlev ladakvaven itrfarsqgy qvevaadgpd
       61 fkltltk
//
LOCUS       WP_235222128             614 aa            linear   BCT 02-MAR-2025
DEFINITION  5'-nucleotidase C-terminal domain-containing protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235222128
VERSION     WP_235222128.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 614)
  AUTHORS   Knofel,T. and Strater,N.
  TITLE     X-ray structure of the Escherichia coli periplasmic 5'-nucleotidase
            containing a dimetal catalytic site
  JOURNAL   Nat Struct Biol 6 (5), 448-453 (1999)
   PUBMED   10331872
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014871.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02872.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..614
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /GO_process="GO:0009166 - nucleotide catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=64845
     Region          38..514
                     /region_name="UshA"
                     /note="2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or
                     3'-nucleotidase, 5'-nucleotidase family [Nucleotide
                     transport and metabolism, Defense mechanisms]; COG0737"
                     /db_xref="CDD:440500"
     Region          <536..614
                     /region_name="XkdP"
                     /note="Cytoplasmic potassium-binding protein
                     Kbp/XkdP/YgaU, contains LysM domain [Inorganic ion
                     transport and metabolism]; COG1652"
                     /db_xref="CDD:441258"
ORIGIN      
        1 mkskkllsll lvlammfslt vtasaeeaav isaapadeiv ilhtndvhcs yeaydkvaal
       61 akdadllvda gdaiqggvig tlskgeyivd imneigydaa vpgnhefdyd mdqflklake
      121 kaeypylsan fvdktgkpvf dayklfevdg kkvafvgltt petftkstpt yfqdgngnyi
      181 ygfceggngq elyaaaqkai daaeaagady viglghlgid gesspwtske vianttgfda
      241 fidghshstf aetvkdkagn dvafaqtgtk lanvgkitik adgtitceni dlanvtadad
      301 ttayiagvte kfdalqntvv akteveltin gadgkravrs aetnlgdlca dayrvmlgad
      361 vafvngggvr anlaagdity gdivnvhpfg neaclvkvtg qqikdalelg asaypgesgg
      421 flqvsgltyt idstipssvv rdeknmfvkv dgayrvsdiq vggqpldvnk tytlashnym
      481 lksqgdgyam fgtdnveiik dcvmidnqvl inyiveelng tvgqeyaapa gritivtapa
      541 epeqpvepak paepekpaae sgtytvvagd clwsiaqkty gtgtkwgviy eankatvkdp
      601 gmiyigqvlt ipaa
//
LOCUS       WP_235221758             118 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF134 domain-containing protein [Oscillibacter valericigenes].
ACCESSION   WP_235221758
VERSION     WP_235221758.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 118)
  AUTHORS   Brazda,V., Luo,Y., Bartas,M., Kaura,P., Porubiakova,O., Stastny,J.,
            Pecinka,P., Verga,D., Da Cunha,V., Takahashi,T.S., Forterre,P.,
            Myllykallio,H., Fojta,M. and Mergny,J.L.
  TITLE     G-Quadruplexes in the Archaea Domain
  JOURNAL   Biomolecules 10 (9), 1349 (2020)
   PUBMED   32967357
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014101.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02001.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..118
                     /product="DUF134 domain-containing protein"
                     /calculated_mol_wt=12830
     Region          1..97
                     /region_name="COG1342"
                     /note="Predicted DNA-binding protein, UPF0251 family
                     [General function prediction only]"
                     /db_xref="CDD:440953"
ORIGIN      
        1 mprnakcrrv crmpahcrfs pegpaereav tlmveefeai rlmdylgltq eeaaaqmdva
       61 rttvqriyaq arqklavflv egrvlsiggg syalcpksgc sgkgcgrcrs ahgkeiep
//
LOCUS       WP_235222150             290 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein
            [Oscillibacter valericigenes].
ACCESSION   WP_235222150
VERSION     WP_235222150.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 290)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..290
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=30638
     Region          1..35
                     /region_name="YifL"
                     /note="Small periplasmic lipoprotein YifL (function
                     unknown) [Function unknown]; COG5567"
                     /db_xref="CDD:444309"
     Region          44..287
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mkkflallma mamilslaac ggskqetpaq sggdsaeapa etrtlrvame cayapynwtq
       61 sddsngavpi sgssdyaygy dvmiakyice qlgwnleivk sdwesiipai qsgtvdagic
      121 gqsitadrle mvdfsdpyyy ativtvvped gtyadaasva dlaggtctsq lntiwydncl
      181 pqipdanilp gqesapamiv altsgrvdyi vtdqptglaa vasnpslkll dftgtdgefe
      241 vsdedinigi svqkgnsell daingvlatl seddytnmmn eaisvqplse
//
LOCUS       WP_235222168             168 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6933 domain-containing protein [Oscillibacter valericigenes].
ACCESSION   WP_235222168
VERSION     WP_235222168.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047079.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22016.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..168
                     /product="DUF6933 domain-containing protein"
                     /calculated_mol_wt=18784
ORIGIN      
        1 mqfgltfplq rklklksvpy gaplerlhcw dlhciplrgq dslllvhcas rytivacgvs
       61 glewarlpdf aleqirsgll daglpektve dylraagape ltrthgrrev aflnrawddv
      121 lamdftvnis tvrqplleqa angipcrcag fegretakqf lyqtfqqi
//
LOCUS       WP_235222167             182 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235222167
VERSION     WP_235222167.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 182)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 182)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..182
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=19605
     Region          2..177
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(9,47,74,157,160)
                     /site_type="active"
                     /db_xref="CDD:238877"
     Site            order(9,157,160)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238877"
     Site            order(9,47,74)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238877"
ORIGIN      
        1 mrlvcfgdsn tygydprsff ggrypgrwtd llaaetgwev vnlgqngrei pvgagnlagl
       61 lrqddllvvm lgsndllchp rftagdtaar megflktlpp crvllvappp mvtgdwvtee
      121 rllsesaala geyeslarrl gfgfadagqw gvelafdgvh ftedghrafa rglqeailcs
      181 lg
//
LOCUS       WP_235222242             266 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235222242
VERSION     WP_235222242.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 266)
  AUTHORS   Ren,J., Sainsbury,S., Nettleship,J.E., Saunders,N.J. and Owens,R.J.
  TITLE     The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals
            a novel protein fold incorporating a helix-turn-helix motif
  JOURNAL   Proteins 78 (7), 1798-1802 (2010)
   PUBMED   20196080
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013540.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01381.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..266
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=28254
     Region          1..78
                     /region_name="HipB"
                     /note="Transcriptional regulator, contains XRE-family HTH
                     domain [Transcription]; COG1396"
                     /db_xref="CDD:441006"
     Region          147..173
                     /region_name="GLTT"
                     /note="GLTT repeat (6 copies); pfam01744"
                     /db_xref="CDD:426406"
ORIGIN      
        1 mefaeklmtl rkqaglsqeq ladrlgvtrq svskwesgta fpelvklvtl semfgvsvdy
       61 lvkdyveepe qqradspdta rleqkvddlt ryvkgsfyay dsqtkifglp lvsvrvgfvr
      121 rqqmswenva kgvfaignva igvvslglvs vgllsfgcia lgllalgvia mglaslgvva
      181 agciafgvca mglyaggvca vgfkiavgva aaagetavgy dadapqvllw gsglsreeve
      241 afllrhhpdl wkpllrffsa lganik
//
LOCUS       WP_235222243             176 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5662 family protein [Oscillibacter valericigenes].
ACCESSION   WP_235222243
VERSION     WP_235222243.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039820.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18907.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..176
                     /product="DUF5662 family protein"
                     /calculated_mol_wt=20567
     Region          2..154
                     /region_name="DUF5662"
                     /note="Family of unknown function (DUF5662); pfam18907"
                     /db_xref="CDD:436821"
ORIGIN      
        1 mhiwahlktv hrhralvrky cfrlglywqg lthdlskysp tefwagakyf qgdhspndaq
       61 rkahgysasw mhhkgrnrhh fefwtdydpd gsgisgvemp kkyvaemfcd rlaaskvyrg
      121 kdfdpgdpyk fflrgkqrrl llhpnteall etilltlrdq gedaafdfvr revlgk
//
LOCUS       WP_235222326             339 aa            linear   BCT 02-MAR-2025
DEFINITION  PhnD/SsuA/transferrin family substrate-binding protein
            [Oscillibacter valericigenes].
ACCESSION   WP_235222326
VERSION     WP_235222326.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12974.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..339
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /calculated_mol_wt=36169
     Region          85..337
                     /region_name="PhnD"
                     /note="ABC-type phosphate/phosphonate transport system,
                     periplasmic component [Inorganic ion transport and
                     metabolism]; COG3221"
                     /db_xref="CDD:442454"
ORIGIN      
        1 mkkvslllal allltltacr kkepetpapp tppepveeep lrmeeltvef prnglstqql
       61 adavktlpnl lktyfdetgl aevervtvtv gsspaataqa lkegnidlaf lpaevfaeeg
      121 setalladar llddgslrag tralicaapt eyggqlsgra ssgkplsrne lgrarwgvld
      181 saslggygcf dlwladnyqg drvsglasvt vygsyddlfr aaangeidal tirddartda
      241 aevwtldntr tgaggvrgyg rtesiwdelp vldvtetlyt tvaavrpela engfapaler
      301 vlqrmseeqp elmvvlgaqc fapvtdaeln ptrrlaalg
//
LOCUS       WP_235222434             218 aa            linear   BCT 02-MAR-2025
DEFINITION  HAD hydrolase-like protein [Oscillibacter valericigenes].
ACCESSION   WP_235222434
VERSION     WP_235222434.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024811.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13419.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..218
                     /product="HAD hydrolase-like protein"
                     /calculated_mol_wt=23901
     Region          4..212
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     Site            order(8..12,107..108,141,166..167,170..171)
                     /site_type="active"
                     /db_xref="CDD:319763"
ORIGIN      
        1 myhyiffdld gtltdskegi lnclryalek lgepvppeni likfigpplq dsfmrycgfd
       61 tekairgiel freryapigk fenaaapgma elcarlkekg yvlalasskl eeicvsicek
      121 fgfapsmeti tgsppvgdwe ktdviretmr rlglseadkp avlmvgdrkf dvlgakecgi
      181 dcvgveffgy aapgelaeag avavvrtaee leqfilsh
//
LOCUS       WP_235222441             305 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleoside recognition domain-containing protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235222441
VERSION     WP_235222441.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 305)
  AUTHORS   Hantke,K.
  TITLE     Is the bacterial ferrous iron transporter FeoB a living fossil?
  JOURNAL   Trends Microbiol 11 (5), 192-195 (2003)
   PUBMED   12781516
REFERENCE   2  (residues 1 to 305)
  AUTHORS   Loewen,S.K., Ng,A.M., Yao,S.Y., Cass,C.E., Baldwin,S.A. and
            Young,J.D.
  TITLE     Identification of amino acid residues responsible for the
            pyrimidine and purine nucleoside specificities of human
            concentrative Na(+) nucleoside cotransporters hCNT1 and hCNT2
  JOURNAL   J Biol Chem 274 (35), 24475-24484 (1999)
   PUBMED   10455109
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019292.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07670.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..305
                     /product="nucleoside recognition domain-containing
                     protein"
                     /calculated_mol_wt=31687
     Region          30..299
                     /region_name="Gate"
                     /note="Nucleoside recognition; cl42053"
                     /db_xref="CDD:455398"
ORIGIN      
        1 mknrwrrdac lvlcgvllwl lrdvqhvrta aaralslcag tvipslfpfl visgllialg
       61 fgewlspyls glmtplfrlp gqasgplllg lvggypigaq saaelyqqgl ltkneterll
      121 afcnnsnpif lisvlgsgvf gsvrvgvwlw lihllsallt gllfrggkap arrekvravs
      181 crtvslpaav vssvrsaang mlsvcafvtl fyvlvsplaa rgghlsavlv gavelfsltp
      241 lltpdafgfv lsaacagwgg lsvlcqtaav ldgtglrlap calgkalqal fsaglalals
      301 gyvlg
//
LOCUS       WP_235222457             416 aa            linear   BCT 02-MAR-2025
DEFINITION  polysaccharide deacetylase family protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235222457
VERSION     WP_235222457.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 416)
  AUTHORS   Freiberg,C., Fellay,R., Bairoch,A., Broughton,W.J., Rosenthal,A.
            and Perret,X.
  TITLE     Molecular basis of symbiosis between Rhizobium and legumes
  JOURNAL   Nature 387 (6631), 394-401 (1997)
   PUBMED   9163424
REFERENCE   2  (residues 1 to 416)
  AUTHORS   Mishra,C., Semino,C.E., McCreath,K.J., de la Vega,H., Jones,B.J.,
            Specht,C.A. and Robbins,P.W.
  TITLE     Cloning and expression of two chitin deacetylase genes of
            Saccharomyces cerevisiae
  JOURNAL   Yeast 13 (4), 327-336 (1997)
   PUBMED   9133736
REFERENCE   3  (residues 1 to 416)
  AUTHORS   Millward-Sadler,S.J., Poole,D.M., Henrissat,B., Hazlewood,G.P.,
            Clarke,J.H. and Gilbert,H.J.
  TITLE     Evidence for a general role for high-affinity non-catalytic
            cellulose binding domains in microbial plant cell wall hydrolases
  JOURNAL   Mol Microbiol 11 (2), 375-382 (1994)
   PUBMED   8170399
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013672.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01522.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..416
                     /product="polysaccharide deacetylase family protein"
                     /GO_function="GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=46612
     Region          157..>328
                     /region_name="CE4_SF"
                     /note="Catalytic NodB homology domain of the carbohydrate
                     esterase 4 superfamily; cl15692"
                     /db_xref="CDD:472828"
     Region          <267..401
                     /region_name="CDA1"
                     /note="Peptidoglycan/xylan/chitin deacetylase,
                     PgdA/NodB/CDA1 family [Carbohydrate transport and
                     metabolism, Cell wall/membrane/envelope biogenesis];
                     COG0726"
                     /db_xref="CDD:440490"
ORIGIN      
        1 mrraislffa lllllslaac gsapapaada psqteeppae vpeappepep epepytildp
       61 tvqpeggvrd gvtyvaydgv vehlffhpvv aypelafdgd yksdgiddwm vtageylkil
      121 qsvydkgyvl vdiadcwseq tgedgqtrmv kntlylpegk kplilsyddv nyyeymleng
      181 ftykliiged gklwswgldp qgnevvsrdl davtildkfv eehpdfspfg akgclsltgy
      241 egilgyrtqt drenwttere anrqkeieav kpivaelkrt gwtfgshtwg hislntrtvd
      301 vvtadmqkwf devgslvget pvlfypfggr ldgddvqqsg pafrwmqqhg frifcsvgid
      361 swskcksdis avicdrlhpd gttlrsakar erymkfydak diidlsvrpq revgwq
//
LOCUS       WP_235222556             287 aa            linear   BCT 02-MAR-2025
DEFINITION  class I SAM-dependent methyltransferase [Oscillibacter
            valericigenes].
ACCESSION   WP_235222556
VERSION     WP_235222556.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 287)
  AUTHORS   Martin,J.L. and McMillan,F.M.
  TITLE     SAM (dependent) I AM: the S-adenosylmethionine-dependent
            methyltransferase fold
  JOURNAL   Curr Opin Struct Biol 12 (6), 783-793 (2002)
   PUBMED   12504684
  REMARK    Erratum:[Curr Opin Struct Biol. 2003 Feb;13(1):142]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022137.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10672.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..287
                     /product="class I SAM-dependent methyltransferase"
                     /EC_number="2.1.1.-"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=32034
     Region          <65..>197
                     /region_name="RlmK"
                     /note="23S rRNA G2069 N7-methylase RlmK or C1962
                     C5-methylase RlmI [Translation, ribosomal structure and
                     biogenesis]; COG1092"
                     /db_xref="CDD:440709"
ORIGIN      
        1 mwiadkwqdy elldcgggek lerwdkqflv rpdpqaiwet phqnpawkra narylrsqtg
       61 gghwekkalp eswkvhygel tfqvkpmnfk htglfpeqav nwdfvmekir nagrpirvln
      121 lfaytggatv acakagasvc hvdaakgmva warenaklsg ledapirwii ddcakfvere
      181 irrgktydai imdppsygrg pggevwklee nlypfvklca gvlsdkplfv linsyttgla
      241 psvlgyllni lvaskyggkc twdelglpvt etglalpcga tgrwfse
//
LOCUS       WP_235222572             328 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Oscillibacter valericigenes].
ACCESSION   WP_235222572
VERSION     WP_235222572.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 328)
  AUTHORS   Clarke,T.A., Edwards,M.J., Gates,A.J., Hall,A., White,G.F.,
            Bradley,J., Reardon,C.L., Shi,L., Beliaev,A.S., Marshall,M.J.,
            Wang,Z., Watmough,N.J., Fredrickson,J.K., Zachara,J.M., Butt,J.N.
            and Richardson,D.J.
  TITLE     Structure of a bacterial cell surface decaheme electron conduit
  JOURNAL   Proc Natl Acad Sci U S A 108 (23), 9384-9389 (2011)
   PUBMED   21606337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037016.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17963.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..328
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=34205
     Region          63..127
                     /region_name="tand_rpt_95"
                     /note="tandem-95 repeat; NF012211"
                     /db_xref="CDD:333740"
ORIGIN      
        1 mklrsfkraa alalaatlvl ggsaqalfgk kqapavaeeg aptaqdvevr tyrgipvqgq
       61 flasdseged mtfalveepr kgtvtiqgad ftytpdegvt ggdsftyaat dsaghisqpa
      121 tvtvtiektk sgvtyadteg ssaaaaaqhl aeagiftgtk igdqyyfqpd aevsrsefla
      181 mvmetagrev tpvtmtgfcd dasiptwaka yaaagvtdgi vqgkttaega afrgeepitf
      241 neaatvldrv ldlgdveldv wyadreavps waaqavgnme avsvlaagsf gsqtmeqavt
      301 radaarmlsp aktlldgeep eglfrwlg
//
LOCUS       WP_235222634             258 aa            linear   BCT 02-MAR-2025
DEFINITION  N-6 DNA methylase [Oscillibacter valericigenes].
ACCESSION   WP_235222634
VERSION     WP_235222634.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 258)
  AUTHORS   Schouler,C., Gautier,M., Ehrlich,S.D. and Chopin,M.C.
  TITLE     Combinational variation of restriction modification specificities
            in Lactococcus lactis
  JOURNAL   Mol Microbiol 28 (1), 169-178 (1998)
   PUBMED   9593305
REFERENCE   2  (residues 1 to 258)
  AUTHORS   Schouler,C., Clier,F., Lerayer,A.L., Ehrlich,S.D. and Chopin,M.C.
  TITLE     A type IC restriction-modification system in Lactococcus lactis
  JOURNAL   J Bacteriol 180 (2), 407-411 (1998)
   PUBMED   9440532
REFERENCE   3  (residues 1 to 258)
  AUTHORS   Thorpe,P.H., Ternent,D. and Murray,N.E.
  TITLE     The specificity of sty SKI, a type I restriction enzyme, implies a
            structure with rotational symmetry
  JOURNAL   Nucleic Acids Res 25 (9), 1694-1700 (1997)
   PUBMED   9108149
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02384.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..258
                     /product="N-6 DNA methylase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=29416
     Region          97..>184
                     /region_name="HsdM"
                     /note="Type I restriction-modification system, DNA
                     methylase subunit [Defense mechanisms]; COG0286"
                     /db_xref="CDD:440055"
ORIGIN      
        1 mviamakavy ypkgerqkti ikllnslegr ysrwdiwqdf ivlsavsian afggpyreqr
       61 eamylerskk yatselevfa qmlaevvdem eqnpdqdmlg elfmalglan ewkgqfftpy
      121 hicramaamn lgedlksqie ekgwvsvsdp acgagallla faneckrnhi nyqtsvffva
      181 qdidflagcm cyiqmsllgc pgyvviddsi lhpaqsyded glipknspnv wltpmyfrdv
      241 whwrrmfaql dlitqekk
//
LOCUS       WP_235222768             248 aa            linear   BCT 02-MAR-2025
DEFINITION  TraX family protein [Oscillibacter valericigenes].
ACCESSION   WP_235222768
VERSION     WP_235222768.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 248)
  AUTHORS   Maneewannakul,K., Maneewannakul,S. and Ippen-Ihler,K.
  TITLE     Characterization of traX, the F plasmid locus required for
            acetylation of F-pilin subunits
  JOURNAL   J Bacteriol 177 (11), 2957-2964 (1995)
   PUBMED   7768788
REFERENCE   2  (residues 1 to 248)
  AUTHORS   Moore,D., Hamilton,C.M., Maneewannakul,K., Mintz,Y., Frost,L.S. and
            Ippen-Ihler,K.
  TITLE     The Escherichia coli K-12 F plasmid gene traX is required for
            acetylation of F pilin
  JOURNAL   J Bacteriol 175 (5), 1375-1383 (1993)
   PUBMED   8444800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017655.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05857.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..248
                     /product="TraX family protein"
                     /calculated_mol_wt=28336
     Region          8..235
                     /region_name="TraX"
                     /note="TraX protein; cl05434"
                     /db_xref="CDD:414418"
ORIGIN      
        1 merkalngnq lkviamaamt idhvtcvlfp gypkvwwill lhiigrmaap ifwffvaegy
       61 yythdrkqya grllvfalis hfaynfafgi pfipfrtsvf nqtsvlwplf wgvvalsvad
      121 serlkqwqkf laviaitvvt fcadwsciav laileigqhr gnfrrqmtgm mrwvalyaav
      181 yvifidpvyg vlqfftalti pllgryngqr gswkgmkwlf yvyyplhlfl cglirvalhg
      241 nigvmigg
//
LOCUS       WP_235222810             736 aa            linear   BCT 02-MAR-2025
DEFINITION  Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal
            domain [Oscillibacter valericigenes].
ACCESSION   WP_235222810
VERSION     WP_235222810.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 736)
  AUTHORS   Baumer,S., Ide,T., Jacobi,C., Johann,A., Gottschalk,G. and
            Deppenmeier,U.
  TITLE     The F420H2 dehydrogenase from Methanosarcina mazei is a
            Redox-driven proton pump closely related to NADH dehydrogenases
  JOURNAL   J Biol Chem 275 (24), 17968-17973 (2000)
   PUBMED   10751389
REFERENCE   2  (residues 1 to 736)
  AUTHORS   Alex,L.A., Reeve,J.N., Orme-Johnson,W.H. and Walsh,C.T.
  TITLE     Cloning, sequence determination, and expression of the genes
            encoding the subunits of the nickel-containing
            8-hydroxy-5-deazaflavin reducing hydrogenase from Methanobacterium
            thermoautotrophicum delta H
  JOURNAL   Biochemistry 29 (31), 7237-7244 (1990)
   PUBMED   2207102
REFERENCE   3  (residues 1 to 736)
  AUTHORS   Shuber,A.P., Orr,E.C., Recny,M.A., Schendel,P.F., May,H.D.,
            Schauer,N.L. and Ferry,J.G.
  TITLE     Cloning, expression, and nucleotide sequence of the formate
            dehydrogenase genes from Methanobacterium formicicum
  JOURNAL   J Biol Chem 261 (28), 12942-12947 (1986)
   PUBMED   3531194
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016328.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04432.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..736
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..736
                     /product="Coenzyme F420 hydrogenase/dehydrogenase, beta
                     subunit C-terminal domain"
                     /calculated_mol_wt=80069
     Region          <276..408
                     /region_name="PRK13795"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:237510"
     Region          358..415
                     /region_name="DsrA"
                     /note="Dissimilatory sulfite reductase (desulfoviridin),
                     alpha and beta subunits [Inorganic ion transport and
                     metabolism]; COG2221"
                     /db_xref="CDD:441823"
     Region          418..660
                     /region_name="FrhB"
                     /note="Coenzyme F420-reducing hydrogenase, beta subunit
                     [Energy production and conversion]; COG1035"
                     /db_xref="CDD:440658"
ORIGIN      
        1 mkaglltfcq tnqtgtllsa aalehaaeal gadceivnyr pggqpaqsgh grqsrekagh
       61 plpglrisgh cfssleelrs aelpydvlla sgpvwagekq dpvffgtftq rrkiayapsf
      121 gggsrsetae lerylagfsh lsaagyrdka ileeaahrnv pvvldpmlll taeewtntlg
      181 ehaknapgey llwdcggrpg plapyvrkla ektglpvvrl hggkgkgrhi edpgpaeyld
      241 lirnaawvct dsfagaalsv vfqkpffasa paaelmvpet srlfgllspl glerrivgkg
      301 dvdglddtid wdtvsarlta qrtaslnflr aaltgegeip etivpqkiet dlprlaaqnr
      361 ctgcgacasg cprdaiamtr gkdgfsypai dpekcvhcgh ctavcpllaq repkplpaaf
      421 aawnrddqir kdstsggvft alaeyvlegg gvvfgaamdg rqhlrhvacf rkedlwrlrg
      481 tkyvqsdlgd tfreiklilk trpvlfsgtp cqvdglyhfl ggrpenlttc dlvchgvpsp
      541 gvwentarsi eqrkgkgiqa vrfrnkvtgw kdshfttvyd dgtvdtaplf rteygrafgr
      601 alflrsschc caytnlnrpg dftlgdfwgl kddelpeqqk kgvslllvnt ahgshifdkl
      661 plsrqvfpve ravagnprla spiqaaldra dffsayalep fdqvrkafca lpplpvriag
      721 kllspevkek irkklr
//
LOCUS       WP_235222820             352 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235222820
VERSION     WP_235222820.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 352)
  AUTHORS   Coquille,S., Roux,C., Fitzpatrick,T.B. and Thore,S.
  TITLE     The last piece in the vitamin B1 biosynthesis puzzle: structural
            and functional insight into yeast
            4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate (HMP-P)
            synthase
  JOURNAL   J Biol Chem 287 (50), 42333-42343 (2012)
   PUBMED   23048037
REFERENCE   2  (residues 1 to 352)
  AUTHORS   Wightman,R. and Meacock,P.A.
  TITLE     The THI5 gene family of Saccharomyces cerevisiae: distribution of
            homologues among the hemiascomycetes and functional redundancy in
            the aerobic biosynthesis of thiamin from pyridoxine
  JOURNAL   Microbiology (Reading) 149 (Pt 6), 1447-1460 (2003)
   PUBMED   12777485
REFERENCE   3  (residues 1 to 352)
  AUTHORS   Rodriguez-Navarro,S., Llorente,B., Rodriguez-Manzaneque,M.T.,
            Ramne,A., Uber,G., Marchesan,D., Dujon,B., Herrero,E.,
            Sunnerhagen,P. and Perez-Ortin,J.E.
  TITLE     Functional analysis of yeast gene families involved in metabolism
            of vitamins B1 and B6
  JOURNAL   Yeast 19 (14), 1261-1276 (2002)
   PUBMED   12271461
REFERENCE   4  (residues 1 to 352)
  AUTHORS   Maundrell,K.
  TITLE     nmt1 of fission yeast. A highly transcribed gene completely
            repressed by thiamine
  JOURNAL   J Biol Chem 265 (19), 10857-10864 (1990)
   PUBMED   2358444
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020650.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09084.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..352
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=37321
     Region          1..>92
                     /region_name="MalE"
                     /note="Maltose-binding periplasmic protein MalE
                     [Carbohydrate transport and metabolism]; COG2182"
                     /db_xref="CDD:441785"
     Region          55..264
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mknkfiamll alamvlslaa cggktepapa etkepeqteq padttpaepa eepitlnvay
       61 mpnygslwav ttainkgyfe eagitvklve fadgptiiaa mesgtidmgy igqgahklci
      121 ngnakifals hisngdavig gpnvktledl kgktvayssg tssedilkmg ldkagltmdd
      181 ikamdmdasn ivtamlsggv dacatwspns lkimeelgad gtllcdnltf sdtsvslasw
      241 ivtpkyaean adkilrftka lykamdyaad gnydevaqyv sdqtktdyds vyaergvadw
      301 ltgkevaaga adgtiehyyk vqqdnfiaag avekevpvad yvmfdnmiea gk
//
LOCUS       WP_235222826             458 aa            linear   BCT 02-MAR-2025
DEFINITION  ROK family protein [Oscillibacter valericigenes].
ACCESSION   WP_235222826
VERSION     WP_235222826.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..458
                     /product="ROK family protein"
                     /calculated_mol_wt=50279
     Region          138..423
                     /region_name="NagC"
                     /note="Sugar kinase of the NBD/HSP70 family, may contain
                     an N-terminal HTH domain [Carbohydrate transport and
                     metabolism, Transcription]; COG1940"
                     /db_xref="CDD:441543"
ORIGIN      
        1 merygisvdv knvpvldpef tpilkfnraf lkdaakpvsi averadgqia tthtfihgtp
       61 emaaadryyi drlvktelwm kggfkvyvsd qgiyeylrgv ycaggerafd wefmadvfek
      121 pfevvytedi petldkpvpm gghlegcrig fdaggsdrkv savidgetvf seevvwlpkv
      181 npdpeyhyeg ivsalksaaa hmprvdavgv ssagiyinnr tmkaslflkv pkdlyeakvk
      241 difiraitdt fgdvpyavan dgdvsalagt mslndnnvlg iamgtseavg yvdengqitg
      301 wlnelafvpv danpdamlde wsgdigcgvk yfcqdgvnkl apragielde slspaeklkv
      361 tqklmeegdq raakvyesig cylghtlayy yekygfryvl llgrvmsgkg gdlllekcqq
      421 vlndeypeaa agfkltlpde kfrrvgqsma aaslpemk
//
LOCUS       WP_235222850             320 aa            linear   BCT 02-MAR-2025
DEFINITION  SPFH domain-containing protein [Oscillibacter valericigenes].
ACCESSION   WP_235222850
VERSION     WP_235222850.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024813.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13421.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..320
                     /product="SPFH domain-containing protein"
                     /calculated_mol_wt=35735
     Region          1..319
                     /region_name="YdjI"
                     /note="Membrane protease subunit, stomatin/prohibitin
                     family, contains C-terminal Zn-ribbon domain
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG4260"
                     /db_xref="CDD:443402"
ORIGIN      
        1 mgfgdfvksq fidvieyvde sskllvykwe rykdeikqga slivregqca vfvhkgqiad
       61 vlypgsysld thnlpvlssl salprlfnsp iksdlyfint tqfldnrwgt knpimmrddd
      121 fgvvritafg tysfrvtgay afmrevfgar klnmtydiis ylnsfvgeai aeaiselkip
      181 vldiasdyrk laalikekvq lkaqplgiei vettienisl ppevekmide qsgiglaskd
      241 mstfmqyqta ramrdaskqh gglaglgagm algnqvakav ndvvpevspt eklreykkll
      301 deeiitqeef dslkkkllki
//
LOCUS       WP_235222889             394 aa            linear   BCT 02-MAR-2025
DEFINITION  alginate O-acetyltransferase AlgX-related protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235222889
VERSION     WP_235222889.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 394)
  AUTHORS   Riley,L.M., Weadge,J.T., Baker,P., Robinson,H., Codee,J.D.,
            Tipton,P.A., Ohman,D.E. and Howell,P.L.
  TITLE     Structural and functional characterization of Pseudomonas
            aeruginosa AlgX: role of AlgX in alginate acetylation
  JOURNAL   J Biol Chem 288 (31), 22299-22314 (2013)
   PUBMED   23779107
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028132.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16822.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..394
                     /product="alginate O-acetyltransferase AlgX-related
                     protein"
                     /calculated_mol_wt=43773
     Region          65..373
                     /region_name="AlgX_N_like"
                     /note="N-terminal catalytic domain of putative alginate
                     O-acetyltranferase and similar proteins; cl16774"
                     /db_xref="CDD:450039"
ORIGIN      
        1 mdkwlnrafl tgllalllav pigtalwgae kttayyenrt laerpaltgt slwdgtfgsa
       61 feswlsdhfp gratllkgdt avqmrlrpvv ngavlggevl lpfrdydtws aeeqsaraae
      121 rgekfaalng yieenggtfl fvgfpeqrty fdseypayln scaeetasas rlfrealedr
      181 gvpfldmgev ydaqghpasy yasvdhhytw ygawaayqei metlhasgfd lpvlteddld
      241 iqtlpnpcig srnrklynlw pnddhivlgi qkdpvafdrr dngqpsgtpl fvtpssaaep
      301 vaygvymggd ygetvlethr pelpkllifg dsftnaletl lyasfdetrs ldlrhyqggs
      361 lkdyiadyrp dvvlcvlnds fyyttagnga vwed
//
LOCUS       WP_235222926             443 aa            linear   BCT 02-MAR-2025
DEFINITION  VWA-like domain-containing protein [Oscillibacter valericigenes].
ACCESSION   WP_235222926
VERSION     WP_235222926.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021484.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09967.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..443
                     /product="VWA-like domain-containing protein"
                     /calculated_mol_wt=49616
     Region          12..432
                     /region_name="COG3864"
                     /note="Predicted metal-dependent peptidase [General
                     function prediction only]"
                     /db_xref="CDD:443073"
ORIGIN      
        1 mhfeqtpeem ealarkllly srrrlthisp vllesvyamp dkvrptpgpl stdgrflwfy
       61 pqrvlndfrk dhdalarqil hitshcllgh lelrptfpna knfdaaadlk aaqfaeaiyg
      121 lsfvdpklek gwgnsyrgfe hlrplyesls tgqeqrsssl ikaarfddha lwtpppaaqg
      181 cgtssgqdgg tpasggspnw dqlrqsmlng rggklpgdaa gllaqsfsvp drgmsyahfl
      241 rrfaapqerm lldpdsfdvr wyhlgleyyg dipllepsel sepplpddlv ialdtsgscs
      301 gevckrflke tlgilrdisg sasrfrvlfl qcdteiqqel lletpeqvee lfqsftahgf
      361 ggtdfrpvfd rveerrrdgt lprvrgllyl sdsygtfpdt ptdyptafli pkenhggfid
      421 sigwitrlyl dkdtftlkea ntp
//
LOCUS       WP_235223000             455 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein
            [Oscillibacter valericigenes].
ACCESSION   WP_235223000
VERSION     WP_235223000.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 455)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..455
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /calculated_mol_wt=48192
     Region          <120..449
                     /region_name="FtsI"
                     /note="Cell division protein FtsI, peptidoglycan
                     transpeptidase (Penicillin-binding protein 2) [Cell cycle
                     control, cell division, chromosome partitioning, Cell
                     wall/membrane/envelope biogenesis]; COG0768"
                     /db_xref="CDD:440531"
ORIGIN      
        1 mkkierravv cgilalllaa gltvflvkyl lsggdwassp fnrhlydtsg qlvvgsvldr
       61 dgdvlsagen gkrtyynnet vrkatlhavg dlqgnigtga lnafadkltg ydllngafga
      121 dqgselymti darynyeayq alnghagtva vynyktgeil cmvsapsydp lnvpkdietn
      181 drykgaylnr flsstftpgs vyktvtltaa leqipdiedr twtctgsvqi gdetiicsgt
      241 hgeqhigdaf anscnvafaq iaeelgadtm kkytekaglt dsysidglpt akgtfhwtdi
      301 tagqlgwagv gqykdqvnpc slmvymgava nggkaakpyl iqktvsalgi pslphittkt
      361 gtlaasgtak kladmmaanv ektygtnrfp nmdicaksgt aevgegqtph awfagflrne
      421 dapyafvvlv enggggssva gtvagkvldi mvngy
//
LOCUS       WP_235223014             301 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235223014
VERSION     WP_235223014.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 301)
  AUTHORS   Ren,J., Sainsbury,S., Nettleship,J.E., Saunders,N.J. and Owens,R.J.
  TITLE     The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals
            a novel protein fold incorporating a helix-turn-helix motif
  JOURNAL   Proteins 78 (7), 1798-1802 (2010)
   PUBMED   20196080
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013540.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01381.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..301
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=33388
     Region          1..70
                     /region_name="HipB"
                     /note="Transcriptional regulator, contains XRE-family HTH
                     domain [Transcription]; COG1396"
                     /db_xref="CDD:441006"
     Region          <170..221
                     /region_name="DUF5518"
                     /note="Family of unknown function (DUF5518); pfam17647"
                     /db_xref="CDD:435941"
ORIGIN      
        1 mafsdnlqfi rtqggvtqeq laeqlnvsrq svskwesgas fpemdtllri cdlydvnmdt
       61 llrgsveesr vsdtaryndf mnrfslrmal sisaiiagva lmillcafnp sdsfrmlava
      121 lfmlivtisv vvivtsgiqy dnfrkkhpvi qdfyteeekd afhqkfvwyi aggvgailfg
      181 vvlligvfaf lpekepyesi aaavfmllia gavfsfvygg mqedkykvwk ynrdnnpdpd
      241 akrrldlaga vsgaimltat aiyvglgftr ntwgtawwvf pvggilcgvv hiamnpykge
      301 d
//
LOCUS       WP_235223088             148 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc ribbon domain-containing protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235223088
VERSION     WP_235223088.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024086.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12674.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..148
                     /product="zinc ribbon domain-containing protein"
                     /calculated_mol_wt=16660
     Region          10..63
                     /region_name="XRE"
                     /note="DNA-binding transcriptional regulator, XRE-family
                     HTH domain [Transcription]; COG1476"
                     /db_xref="CDD:441085"
     Region          70..146
                     /region_name="Zn_ribbon_2"
                     /note="Putative zinc ribbon domain; pfam12674"
                     /db_xref="CDD:463667"
ORIGIN      
        1 mefkdvftdl rkkaelsqne vaekvfvtrq avsrwerget vpatetllal srlfgvsvnt
       61 llgsprtlvc qscgmplsdd flaqeadgsf netyckwcwv dgafaqectm eemvehcvpl
      121 mplgqaepea crtymrgllp tlerwkqk
//
LOCUS       WP_235223154             761 aa            linear   BCT 02-MAR-2025
DEFINITION  S-layer homology domain-containing protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235223154
VERSION     WP_235223154.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 761)
  AUTHORS   Mesnage,S., Fontaine,T., Mignot,T., Delepierre,M., Mock,M. and
            Fouet,A.
  TITLE     Bacterial SLH domain proteins are non-covalently anchored to the
            cell surface via a conserved mechanism involving wall
            polysaccharide pyruvylation
  JOURNAL   EMBO J 19 (17), 4473-4484 (2000)
   PUBMED   10970841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012613.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00395.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..761
                     /product="S-layer homology domain-containing protein"
                     /calculated_mol_wt=83057
     Region          <237..579
                     /region_name="GluZincin"
                     /note="Gluzincin Peptidase family (thermolysin-like
                     proteinases, TLPs) which includes peptidases M1, M2, M3,
                     M4, M13, M32 and M36 (fungalysins); cl14813"
                     /db_xref="CDD:472708"
     Region          592..632
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          651..692
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
ORIGIN      
        1 mkhkkrfprl calsltlvlv fslsapglaw eerktdiltk tpqevdfntl tygepymdev
       61 eavakaveta aakddnaaet aeavralkam edrlstdyav msvhyasdpt amsqtyvdwn
      121 sfymtafnri aeafsavans anagalelal gedgaayyad aeadtpeqla lqnhcaelvd
      181 dywqamaetp vvrykgvtyh geeeanaala egkltyedwn qvclllakei nkvvgplyvd
      241 lvktwkayaa swgyddcaaf fyknvyirdy tpqeaeaihd avktyivplc glytvlfntp
      301 eiqygtavln gqfstlsqng lldmiqpymg yvsseladlf aymrrchlvd tafsetkndq
      361 gfttslpqyq safifnkpym nindledllh efghfseacl sggsdygnsl dlaeinsqal
      421 vllcqpymga mvgeenasac rfsnlrrmvs gyilssclsd efqqrvfaed dltldkvnri
      481 yhdvcaeygs yladdtygyg wqytshhfet pfymisytts alasaelftt slsdydkacd
      541 eylrlmeigt aqpfratlee agmadvfree tvagiadall dytydtvlgv sfsdteglaa
      601 edgirltaaf glfqgkadga frpgesltra qaatvlwrln gcpepegasp fqdvpdgswc
      661 adavtwcaen givqgdgagh fvpgalvtrq amltmlyrav gspeadeavl sgvsgsgslg
      721 efarpgaawa venglvdgal qpqgqvsrge aaellaalia a
//
LOCUS       WP_235223131             346 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail sheath C-terminal domain-containing protein
            [Oscillibacter valericigenes].
ACCESSION   WP_235223131
VERSION     WP_235223131.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 346)
  AUTHORS   Aksyuk,A.A., Kurochkina,L.P., Fokine,A., Forouhar,F.,
            Mesyanzhinov,V.V., Tong,L. and Rossmann,M.G.
  TITLE     Structural conservation of the myoviridae phage tail sheath protein
            fold
  JOURNAL   Structure 19 (12), 1885-1894 (2011)
   PUBMED   22153511
REFERENCE   2  (residues 1 to 346)
  AUTHORS   Xue,Q. and Egan,J.B.
  TITLE     Tail sheath and tail tube genes of the temperate coliphage 186
  JOURNAL   Virology 212 (1), 218-221 (1995)
   PUBMED   7676633
REFERENCE   3  (residues 1 to 346)
  AUTHORS   Temple,L.M., Forsburg,S.L., Calendar,R. and Christie,G.E.
  TITLE     Nucleotide sequence of the genes encoding the major tail sheath and
            tail tube proteins of bacteriophage P2
  JOURNAL   Virology 181 (1), 353-358 (1991)
   PUBMED   1825255
REFERENCE   4  (residues 1 to 346)
  AUTHORS   Arisaka,F., Ishimoto,L., Kassavetis,G., Kumazaki,T. and Ishii,S.
  TITLE     Nucleotide sequence of the tail tube structural gene of
            bacteriophage T4
  JOURNAL   J Virol 62 (3), 882-886 (1988)
   PUBMED   2963141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037565.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17482.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..346
                     /product="phage tail sheath C-terminal domain-containing
                     protein"
                     /calculated_mol_wt=36784
     Region          79..216
                     /region_name="Phage_sheath_1"
                     /note="Phage tail sheath protein subtilisin-like domain;
                     cl01389"
                     /db_xref="CDD:470182"
     Region          223..>280
                     /region_name="Phage_sheath_1C"
                     /note="Phage tail sheath C-terminal domain; pfam17482"
                     /db_xref="CDD:435922"
ORIGIN      
        1 mglpeifinf qtaavsaitr sargvlaval tdateggave avykslaevp qekftaenyr
       61 llelafltap skvcvlrvge daeliyqale rlcfdwlaap glenatvisf ikmlrangrg
      121 vkavvanata pdcegivnlc vsdlvledga idakdytarv agllaalplt rsatyvslpe
      181 vvgcaalddp dgdvdagkli ivsgrdgyrl gravnslttl tpdkagpfqk ikivegidli
      241 rtdiakafes gyvgkvlndy dnklllvtai naylkglegd vldktadnrc fvslsgqrsy
      301 lesrgtdtsd mkdadilran tgsqvflean ltfcdamedl slviam
//
LOCUS       WP_235223205             370 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase family protein [Oscillibacter valericigenes].
ACCESSION   WP_235223205
VERSION     WP_235223205.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024914.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13524.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..370
                     /product="glycosyltransferase family protein"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=41031
     Region          26..358
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mkichlssvr eshdlcmfqr savsaaragy evsivakgts redsgvrvtg egeppgsrlk
       61 rmlfftrsiy raalaedadl yqihdpellp yglklkrqgk rvvfdshely avllrskhyl
      121 kcaklaaaly aryeryvlrr idavifpgti qgkdpfagvs qrtvlvanya qkdelyaryv
      181 prekgspamc fvghvtpdrg aenmveaaek agmklifvgd fvpedygarv ralpgwryvd
      241 frgpldrnav akvyqeaamg lcvlpdggqy nlsdtfnmkv ydymamglpv ilsdsayarq
      301 vnekyrfaml vdpadtdaia aaarylaehp seaaqmgeag rravaeefnw dtqaakllal
      361 yrdligppgt
//
LOCUS       WP_235223225             330 aa            linear   BCT 02-MAR-2025
DEFINITION  Cna B-type domain-containing protein [Oscillibacter valericigenes].
ACCESSION   WP_235223225
VERSION     WP_235223225.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 330)
  AUTHORS   Deivanayagam,C.C., Rich,R.L., Carson,M., Owens,R.T., Danthuluri,S.,
            Bice,T., Hook,M. and Narayana,S.V.
  TITLE     Novel fold and assembly of the repetitive B region of the
            Staphylococcus aureus collagen-binding surface protein
  JOURNAL   Structure 8 (1), 67-78 (2000)
   PUBMED   10673425
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017548.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05738.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..330
                     /product="Cna B-type domain-containing protein"
                     /calculated_mol_wt=36428
     Region          66..>293
                     /region_name="iso_D2_wall_anc"
                     /note="SpaH/EbpB family LPXTG-anchored major pilin;
                     NF033902"
                     /db_xref="CDD:468234"
     Region          178..257
                     /region_name="Cna_B"
                     /note="Cna protein B-type domain; pfam05738"
                     /db_xref="CDD:461726"
ORIGIN      
        1 mkwyrvlaca vlaclllpaa alarglidtg kpvsltiqyp cqdaafqiyr vaevssygey
       61 tltgdfkgys vsldqpdqag wralaatleg yaardglqal aegktdangr vtftrlepgm
      121 ylvtgekhtt gritytpepf lvslpgldek dnwvyevtad pkyeqeneeh dggtvtrkvl
      181 kvwddggaek rpesvtvqll rngnvydtvt lseenrwsht wsgldrdytw qiveadvpes
      241 ytvtvtregi tfvvtntrqg dvpeeptpep pnqpsgpdep degnpdgpep gpslpqtgtl
      301 wwlvpllacg gmalflvgwd rrrneernet
//
LOCUS       WP_235223231             105 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6809 family protein [Oscillibacter valericigenes].
ACCESSION   WP_235223231
VERSION     WP_235223231.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF044580.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20648.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..105
                     /product="DUF6809 family protein"
                     /calculated_mol_wt=12462
ORIGIN      
        1 mhdymkalyh rfetpsrrae hldrkikrth sqlarllnkp ekklllriad medelrdeac
       61 lnsfisgyrl aqgiqqelqa dqppysfeae derqaceswe rrdte
//
LOCUS       WP_235223233             245 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Oscillibacter valericigenes].
ACCESSION   WP_235223233
VERSION     WP_235223233.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 245)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..245
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=27139
     Region          6..233
                     /region_name="PRK10529"
                     /note="DNA-binding transcriptional activator KdpE;
                     Provisional"
                     /db_xref="CDD:182522"
ORIGIN      
        1 mnkpqilfve ddtavgnlia ttletqnyqf hrakngqqai ldalscrpdv mlldlglpdm
       61 dgieiikkvr swsnmpiivv saraddrdkv taldagaddy ltkpfsvdel larlrvalrr
      121 vrydsqktse asaryqnggl vidyaagcay rdgqelhltp ieykllclla kntgkvlthn
      181 yiiseiwggs adsaaaelps lrvfmatlrk kleadqshpq yiqthigigy rmiqcgkepe
      241 aqens
//
LOCUS       WP_235223259              95 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2089 family protein [Oscillibacter valericigenes].
ACCESSION   WP_235223259
VERSION     WP_235223259.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021388.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09862.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..95
                     /product="DUF2089 family protein"
                     /calculated_mol_wt=10720
     Region          <4..78
                     /region_name="DUF2089"
                     /note="Protein of unknown function (DUF2089); cl22936"
                     /db_xref="CDD:473997"
ORIGIN      
        1 mtippwmael ededmafikk filasgslke vasvygvtyp tvrlrldrli qkikltetae
       61 adpyvslvkr lavddkldfd taklliaeyr ktreg
//
LOCUS       WP_235223288             105 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6809 family protein [Oscillibacter valericigenes].
ACCESSION   WP_235223288
VERSION     WP_235223288.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF044580.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20648.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..105
                     /product="DUF6809 family protein"
                     /calculated_mol_wt=12475
ORIGIN      
        1 mhdymkalyh rfetpsrrae yldrkikkth nqltrlldkp erklllriad medelrdeac
       61 lnsfisgfrl aqgiqqella dqppysfeae derqacqrys qeenn
//
LOCUS       WP_235223356             268 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4097 family beta strand repeat-containing protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235223356
VERSION     WP_235223356.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024743.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13349.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..268
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /calculated_mol_wt=27440
     Region          56..>194
                     /region_name="DUF4097"
                     /note="Putative adhesin; pfam13349"
                     /db_xref="CDD:433135"
ORIGIN      
        1 mttaqriiky cavafavsli vsiiggifga vsslsalsgd gdalgemqty avpaavenle
       61 vdlsgarlei kegsefsves dhkylkvaaa dgtlsikeer pvlhsegarv iltvprdfaf
      121 eqvtisagag tvkadtllse klsldlgage adighltatv kavvnsgage lkigggelan
      181 ldldigvgea elksrltgsc sidygvgele ltlagtredy citldkgvgt atldgvkmtd
      241 dtvygdgetf igidggigei rvgfaplp
//
LOCUS       WP_235223385             219 aa            linear   BCT 02-MAR-2025
DEFINITION  CatA-like O-acetyltransferase [Oscillibacter valericigenes].
ACCESSION   WP_235223385
VERSION     WP_235223385.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012523.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00302.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..219
                     /product="CatA-like O-acetyltransferase"
                     /calculated_mol_wt=24989
     Region          1..212
                     /region_name="CatA"
                     /note="Chloramphenicol O-acetyltransferase [Defense
                     mechanisms]; COG4845"
                     /db_xref="CDD:443873"
ORIGIN      
        1 mtftpidaas wprmqtfyyf sqmaptgwsl tveldvtalr qtlkgrglkf ypaylwlvtk
       61 nlnadpafrl akqgeqigty dtltplyavf heddksfsmm wtefdpdfsa fyrsfaenqa
      121 rygtghgfls qpetpppana ytvscvpwvs fqhfavhsyg lkdyffpsve agkfvlrdgr
      181 cflplsltch haatdgyhvs kflerlqadm ddfsrflpk
//
LOCUS       WP_235223483             920 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Oscillibacter valericigenes].
ACCESSION   WP_235223483
VERSION     WP_235223483.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024867.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13476.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..920
                     /product="AAA family ATPase"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /GO_process="GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /calculated_mol_wt=99111
     Region          1..913
                     /region_name="sbcc"
                     /note="exonuclease SbcC; TIGR00618"
                     /db_xref="CDD:129705"
ORIGIN      
        1 mrplkltiag fgpyagtqtl dfemlgssgl ylitgdtgag kttifdaitf alfgeasggd
       61 rspdmlrsky akdsdptfve ltfsyggevy kvrrnpeyqr aktrgdgttk qlaeaeltyp
      121 dshvvtkqkd vdravrdiig ltreqfaqva misqgdfrkl lqadtrerqk ifrdifgtgl
      181 yvtlqeqlka ksgelrsqre qagasirqya egiacrqdsp lapdvqkare calpltemqt
      241 lleqllaedt aaqeslgrql teldgrleal vaqltkaety qaaklsltvk taqeaakaat
      301 leqlssalta aqatkpeqea lgkqitamel llptydelda klrersikek aladavstqn
      361 taqqqsaalt aevsalreer kglesvsaem eklqnrqqal tdrrekyral sanidalnaq
      421 kaelarlqna ylaaeaqssr lwqeydarnk afldeqagii astlpagapc pvcgstehph
      481 lavlpegapt eaevkkakaa yekaqreteq asgkastqrg ivnggeeavq kaippllgvv
      541 spedaqtaak aqeaaltgei aeteqqlaal rrqaarkaql ddlipqkeaa laaeeqalag
      601 aktqiaglna slaglssqia glaaklsfpd kaaalaeksa leqklnglka sldsaeaayt
      661 ackdeltalr aameqlrsql aeepetdaea lvarkaelsa rkdgitqaqk elharvtana
      721 ciqgniaara keleeldary gwmkalsdta ngtvtgkdkv mletyiqtty fdrilerani
      781 rlrkmsggqy dlkrrgkass qrsqsgleld ivdhintter svntlsggea flaslslalg
      841 lsdevqmstg irldtlfvde gfgsldseal skayltlagl tegnrlvgii shvaelkeki
      901 drqivvtkel sggsraaivv
//
LOCUS       WP_235223489             310 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235223489
VERSION     WP_235223489.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 310)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..310
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=34101
     Region          3..307
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(7,9..10,12,31..33,78..80,120..122,147,151,174..177)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187545"
     Site            order(98,122,147,151)
                     /site_type="active"
                     /db_xref="CDD:187545"
ORIGIN      
        1 mkvlvaggag figshlidal laegndvvcv dnffigtren iahlkdnehf kfyeqdltdl
       61 dkvleifkke qveyvfhlaa nsdiqasaqs pmieykntys ttfillecmr qcgvkklffs
      121 stsavygeqm gaevseeava lspisyygga klgsegiiss faymndmsvl vfrfpnvigp
      181 rlthgvifdf vkrlkadpsh lkilgdgqqs kpyiyvldlv daimrfkdvp kgvtlynvgv
      241 etqtsvtria eivcekmglt gipfeytggr ggwkgdvpvf aynlekihsa gwtahmtsde
      301 avaktvemvl
//
LOCUS       WP_235223521            1096 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase family protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235223521
VERSION     WP_235223521.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04851.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..1096
                     /product="DEAD/DEAH box helicase family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=125385
     Region          22..115
                     /region_name="DUF4145"
                     /note="Domain of unknown function (DUF4145); pfam13643"
                     /db_xref="CDD:433374"
     Region          188..1096
                     /region_name="HsdR"
                     /note="Type I site-specific restriction endonuclease, part
                     of a restriction-modification system [Defense mechanisms];
                     COG4096"
                     /db_xref="CDD:443272"
ORIGIN      
        1 mtnfdfltsd pqfntfstva vsaerilhid paacvlncrr amefavkwmy svdgslvlpy
       61 ddrlvslmdn edfrdivgqd iwrrmklirt lgnnaahtgk kiseeqaalc lenlfvfldf
      121 vaycygteyt ertfdpallk depaapppvd teaevkleql maenaalree ltarraeqqq
      181 tyvpkpldls eyktrkiyid amlldagwte grdwlnevel pgmpnksevg yadyvlyddt
      241 hkplavieak rtcvdvskgr qqaklyadil erkysrrpvi fltngfetri ddgayperkv
      301 atiyskrdle klfnlrtmrt slknvmvdkr iagryyqesa ikavcdsfdr rnrrkallvm
      361 atgsgktrtv ialcdvllnh gwvknilfla drnslvtqak rsfvnllpdl svtnlceekd
      421 nytahcvfst yqtmmncida vkdeqgklft cghfdlvicd eahrsiynky rdifnyfdap
      481 lvgltatpkd eidkntyeif elesgvptyg yelsqavkdg flvdfmsvet klkfieqgit
      541 ydelsdedka ayedtfeden gelperisss alnewvfned tikevlhilm tnglridyge
      601 klgktiifak nhthaekife ifnreyphlp gyakvidnym tyaqsaidef sdpkklpqia
      661 isvdmldtgi dvpevlnlvf fkkvmskakf wqmigrgtrl cpglidgedk nkfyifdfcg
      721 nfeffrmnkg rptanqmalq gaifnlkaqm ayklqdlqfq tddliafrke lvadmvrkvr
      781 elnkenfavr qhlkyvelya npdnyaalsy edtliikeel aplimpdede paamrfdalm
      841 ygielaylvg kkytkarsdl fkkvsgiagv anipeimaqa elirkilhtd fldnaginef
      901 enireslrgl vkyiqgghpt yttnfddeil smdwhesele nddlknykak aefyvrqhqd
      961 eaviaklksn vplnsddvaa lekilwsevg tkedyeaeig skplgefvre ivgldmkaak
     1021 eafsmylndt sldsrqiyfv nqiveyivhn glmkdlsvlq espftdrgsv vdiftdltvw
     1081 mgirkiieqv nanava
//
LOCUS       WP_235223562             149 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Oscillibacter valericigenes].
ACCESSION   WP_235223562
VERSION     WP_235223562.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00872.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         <1..149
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <1..146
                     /region_name="Transposase_mut"
                     /note="Transposase, Mutator family; cl27632"
                     /db_xref="CDD:474953"
ORIGIN      
        1 rcivhqvrss tryvsykdik kvvadlkkiy gavtleeaek nlqtfaetwr kqypscvksw
       61 eenwpvlstf feypveirki iyttniiegl nrqfrqitkn kpsftnddsl rrmlylasqr
      121 ivkhwharyq nwdlvlsqle imfadravg
//
LOCUS       WP_235223556             306 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Oscillibacter valericigenes].
ACCESSION   WP_235223556
VERSION     WP_235223556.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 306)
  AUTHORS   Davies,D.R., Mahnke Braam,L., Reznikoff,W.S. and Rayment,I.
  TITLE     The three-dimensional structure of a Tn5 transposase-related
            protein determined to 2.9-A resolution
  JOURNAL   J Biol Chem 274 (17), 11904-11913 (1999)
   PUBMED   10207011
REFERENCE   2  (residues 1 to 306)
  AUTHORS   DasSarma,S.
  TITLE     Identification and analysis of the gas vesicle gene cluster on an
            unstable plasmid of Halobacterium halobium
  JOURNAL   Experientia 49 (6-7), 482-486 (1993)
   PUBMED   8335077
REFERENCE   3  (residues 1 to 306)
  AUTHORS   Ferrante,A.A. and Lessie,T.G.
  TITLE     Nucleotide sequence of IS402 from Pseudomonas cepacia
  JOURNAL   Gene 102 (1), 143-144 (1991)
   PUBMED   1650732
REFERENCE   4  (residues 1 to 306)
  AUTHORS   De Meirsman,C., Van Soom,C., Verreth,C., Van Gool,A. and
            Vanderleyden,J.
  TITLE     Nucleotide sequence analysis of IS427 and its target sites in
            Agrobacterium tumefaciens T37
  JOURNAL   Plasmid 24 (3), 227-234 (1990)
   PUBMED   1963949
REFERENCE   5  (residues 1 to 306)
  AUTHORS   Sato,S., Nakada,Y. and Shiratsuchi,A.
  TITLE     IS421, a new insertion sequence in Escherichia coli
  JOURNAL   FEBS Lett 249 (1), 21-26 (1989)
   PUBMED   2542093
REFERENCE   6  (residues 1 to 306)
  AUTHORS   Kroger,M. and Hobom,G.
  TITLE     Structural analysis of insertion sequence IS5
  JOURNAL   Nature 297 (5862), 159-162 (1982)
   PUBMED   6281654
REFERENCE   7  (residues 1 to 306)
  AUTHORS   Klaer,R., Kuhn,S., Tillmann,E., Fritz,H.J. and Starlinger,P.
  TITLE     The sequence of IS4
  JOURNAL   Mol Gen Genet 181 (2), 169-175 (1981)
   PUBMED   6268937
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01609.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..>306
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          35..>257
                     /region_name="transpos_IS4_1"
                     /note="IS4 family transposase; NF033592"
                     /db_xref="CDD:468101"
ORIGIN      
        1 mrnypnalkr klldticqmr eelskyttdp krdftrnrkl pfemlcrtil smsgqslnve
       61 lqrqfhydpt aattsafvqq rgkllpavfe eilrrftcqn rpirrwngyt llavdgshvq
      121 ipsnihdeat yfnstkdgrg ynllhlnaly dlesqlylda viqdgreehe sralvelvdr
      181 leltepvili adrgyeaynn mahieqkgwk ylirvkdkqg ilsglklpda lefdavfsys
      241 lskrltnrir qepqkyrwip skvhfdyikd asdalypisl arckilckrf stksrmales
      301 radsgl
//
LOCUS       WP_235223571              72 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Oscillibacter valericigenes].
ACCESSION   WP_235223571
VERSION     WP_235223571.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00872.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         <1..>72
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          5..>72
                     /region_name="Transposase_mut"
                     /note="Transposase, Mutator family; cl27632"
                     /db_xref="CDD:474953"
ORIGIN      
        1 rercersdkp egaprnyrng ytkktvktql gevdikvprd rngsfepkii gkydrnadgm
       61 edkilalyac gm
//
LOCUS       WP_235223620             373 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphatase PAP2 family protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235223620
VERSION     WP_235223620.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 373)
  AUTHORS   Neuwald,A.F.
  TITLE     An unexpected structural relationship between integral membrane
            phosphatases and soluble haloperoxidases
  JOURNAL   Protein Sci 6 (8), 1764-1767 (1997)
   PUBMED   9260289
REFERENCE   2  (residues 1 to 373)
  AUTHORS   Stukey,J. and Carman,G.M.
  TITLE     Identification of a novel phosphatase sequence motif
  JOURNAL   Protein Sci 6 (2), 469-472 (1997)
   PUBMED   9041652
REFERENCE   3  (residues 1 to 373)
  AUTHORS   Messerschmidt,A. and Wever,R.
  TITLE     X-ray structure of a vanadium-containing enzyme: chloroperoxidase
            from the fungus Curvularia inaequalis
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 392-396 (1996)
   PUBMED   8552646
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013718.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01569.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..373
                     /product="phosphatase PAP2 family protein"
                     /calculated_mol_wt=38480
     Region          120..310
                     /region_name="PgpB"
                     /note="Membrane-associated phospholipid phosphatase [Lipid
                     transport and metabolism]; COG0671"
                     /db_xref="CDD:440435"
     Region          <226..307
                     /region_name="PAP2_like"
                     /note="PAP2_like proteins, a super-family of histidine
                     phosphatases and vanadium haloperoxidases, includes type 2
                     phosphatidic acid phosphatase or lipid phosphate
                     phosphatase (LPP), Glucose-6-phosphatase,
                     Phosphatidylglycerophosphatase B and bacterial acid...;
                     cl00474"
                     /db_xref="CDD:469784"
ORIGIN      
        1 miyfggatgg aiggatggat ggatggatgg atggatggat ggatggataq hagspassll
       61 stalgtsrds ivghwnggyd gvvianpeip tdlsyltdst ktvvltshla smfvvdaqia
      121 apdvatatih fqgkpfmtle rpdiavfinq lkwvrayadl rldrlaeiqv qlfdimsffg
      181 titqiadgrr envkrllqit qgvcisveqq vkhglrshrp idlsnnvqpi iqtpdhssfp
      241 sghateafai atvlhrlrtg aapdplamef rlahriaanr vvagvhfpvd siagaqlgcr
      301 igeaiaaaaq eksgvkalra gqvafpkdyn edatlatmfe dssyegaaia iadikpsklv
      361 adlwgaalee vtp
//
LOCUS       WP_235223639             172 aa            linear   BCT 02-MAR-2025
DEFINITION  redoxin domain-containing protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235223639
VERSION     WP_235223639.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Chae,H.Z., Robison,K., Poole,L.B., Church,G., Storz,G. and
            Rhee,S.G.
  TITLE     Cloning and sequencing of thiol-specific antioxidant from mammalian
            brain: alkyl hydroperoxide reductase and thiol-specific antioxidant
            define a large family of antioxidant enzymes
  JOURNAL   Proc Natl Acad Sci U S A 91 (15), 7017-7021 (1994)
   PUBMED   8041738
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012787.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00578.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..172
                     /product="redoxin domain-containing protein"
                     /GO_function="GO:0016209 - antioxidant activity [Evidence
                     IEA]"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=18735
     Region          18..134
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 mptpkpvads iiapmsfpra gggeitvggq kynwtllvvy rgkhcprckr yltildgmrn
       61 dwtaagfdia vvsadtqeka qadqeefgwg fdlgydlnea qmnllglyvt eplsanetdr
      121 rfaepgtyvl rpngsliavs isngpavrpd lselldgmif nkkndrparg tv
//
LOCUS       WP_235223668             692 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase [Octadecabacter dasysiphoniae].
ACCESSION   WP_235223668
VERSION     WP_235223668.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 692)
  AUTHORS   de la Cruz,J., Kressler,D. and Linder,P.
  TITLE     Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and
            related families
  JOURNAL   Trends Biochem Sci 24 (5), 192-198 (1999)
   PUBMED   10322435
REFERENCE   2  (residues 1 to 692)
  AUTHORS   Aubourg,S., Kreis,M. and Lecharny,A.
  TITLE     The DEAD box RNA helicase family in Arabidopsis thaliana
  JOURNAL   Nucleic Acids Res 27 (2), 628-636 (1999)
   PUBMED   9862990
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012492.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00270.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..692
                     /product="DEAD/DEAH box helicase"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=74339
     Region          1..383
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     Region          446..512
                     /region_name="RRM_DbpA"
                     /note="RNA recognition motif (RRM) found in the DbpA
                     subfamily of prokaryotic DEAD-box rRNA helicases; cd12252"
                     /db_xref="CDD:409698"
     Site            order(453,458..461,463..465,467..468,474,477..480,
                     510..511)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409698"
     Region          <536..>690
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
ORIGIN      
        1 mkktladals akgydtltav qeaclnpeve grdllvsaqt gsgktigfgl aiapqilgdg
       61 drfdradapl alviaptrel amqvkreldw lykaagavvv stvggmdmrd erralergsh
      121 ivvatpgrlr dhvmrksidm dslkavvlde ademldlgfr edlefildsa pedrqtllfs
      181 atvpasiakl aksyqkdamr ietvsatsqh adieyralrv sardgenaim nvlryyeapn
      241 aivfcntrat vnrlttrlsn rglsvvalsg elsqsertha lqamrdgrar vcvatdvaar
      301 gidlpnlelv ihaelptnqd tllhrsgrtg ragrkgvsam ivppasrrka erllgwaklt
      361 atwadapgad evlakdeerm lgnpswlepv adgeretvek ltkaftaeqi aasylrlyre
      421 rntapedlad vgaapapraa fgasvwfsla ggratgadpr rllpmlckmg nitkddigai
      481 riqpkesmfe irdtavdgfl kavgsamtme dgailmrlng kpkldpqprr eshggkpggk
      541 repkkwdkpr ddadapaskp egkswgkprt aptdakpksk gttapvdwnd apeerrkkpk
      601 ggakpsfggk pkggpakdhd gavstpkkhr ksgdghpask rmdgpprgkp kskppagtsp
      661 agkpsskknr arqaavkaas kaggntppkr kg
//
LOCUS       WP_235223646             297 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235223646
VERSION     WP_235223646.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..297
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=34001
     Region          16..97
                     /region_name="cupin_MtlR-like_N"
                     /note="AraC/XylS family transcriptional regulators similar
                     to MtlR, N-terminal cupin domain; cd06976"
                     /db_xref="CDD:380381"
     Region          <179..282
                     /region_name="GlxA"
                     /note="Transcriptional regulator GlxA, contains an amidase
                     domain and an AraC-type DNA-binding HTH domain
                     [Transcription]; COG4977"
                     /db_xref="CDD:444002"
ORIGIN      
        1 msiiepeiev leanahsvry lehgwpdplc rwhshkecel hlildtqgka fvgdyigdfg
       61 pkslfltgpn lphnwitdef wdgpvthrdm viqfdqdrii klasafgefs dvsrliersr
      121 sgleffdfdf dwvrnkfvqv rdlsgtyqml afielltyvt gipsakelsl vkmqqnvgdt
      181 rhariaivid yivehfaenl kvetaaelsg mspqtfsrnf qavtgrrfve fvnrvrigea
      241 cgmlyatelq iteichkagf knlanfnrhf lkvksmtpse yrdiarkdlv pqleaaq
//
LOCUS       WP_235223757             151 aa            linear   BCT 02-MAR-2025
DEFINITION  universal stress protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235223757
VERSION     WP_235223757.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 151)
  AUTHORS   Sousa,M.C. and McKay,D.B.
  TITLE     Structure of the universal stress protein of Haemophilus influenzae
  JOURNAL   Structure 9 (12), 1135-1141 (2001)
   PUBMED   11738040
REFERENCE   2  (residues 1 to 151)
  AUTHORS   Zarembinski,T.I., Hung,L.W., Mueller-Dieckmann,H.J., Kim,K.K.,
            Yokota,H., Kim,R. and Kim,S.H.
  TITLE     Structure-based assignment of the biochemical function of a
            hypothetical protein: a test case of structural genomics
  JOURNAL   Proc Natl Acad Sci U S A 95 (26), 15189-15193 (1998)
   PUBMED   9860944
REFERENCE   3  (residues 1 to 151)
  AUTHORS   Nystrom,T. and Neidhardt,F.C.
  TITLE     Expression and role of the universal stress protein, UspA, of
            Escherichia coli during growth arrest
  JOURNAL   Mol Microbiol 11 (3), 537-544 (1994)
   PUBMED   8152377
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012791.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00582.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..151
                     /product="universal stress protein"
                     /calculated_mol_wt=16477
     Region          1..>110
                     /region_name="UspA"
                     /note="Nucleotide-binding universal stress protein, UspA
                     family [Signal transduction mechanisms]; COG0589"
                     /db_xref="CDD:440354"
ORIGIN      
        1 mrkflvildd sreclnamrf aamraaktgg gvevlsiipp defnhwigva dvmraetrer
       61 ievhfevfak wmrdkqgvdp elviregvpv neilaqieed pevgvlvlga asdkkgpgpl
      121 itamtkqags lpipmtivpg dmskerleai s
//
LOCUS       WP_235223785             180 aa            linear   BCT 02-MAR-2025
DEFINITION  Hint domain-containing protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235223785
VERSION     WP_235223785.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13403.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..180
                     /product="Hint domain-containing protein"
                     /calculated_mol_wt=19302
     Region          20..158
                     /region_name="Hint"
                     /note="Hedgehog/Intein domain, found in Hedgehog proteins
                     as well as proteins which contain inteins and undergo
                     protein splicing (e.g. DnaB, RIR1-2, GyrA and Pol). In
                     protein splicing an intervening polypeptide sequence - the
                     intein - is excised from a protein; cl22434"
                     /db_xref="CDD:451395"
ORIGIN      
        1 mrhqpelqal apwvaafgit pdtristplg erpaddlaig dlvntrddgp qpitnireaf
       61 aapsernhyp vciaqgalgf glpranlhvg aqhrvlfqhi rvplmfgada vlvrakslav
      121 shanvavqka vapvsfiqis tqdqaiifae gvpietilrd gecdlgfmtl rswelmaava
//
LOCUS       WP_235223865             227 aa            linear   BCT 02-MAR-2025
DEFINITION  Hint domain-containing protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235223865
VERSION     WP_235223865.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13403.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..227
                     /product="Hint domain-containing protein"
                     /calculated_mol_wt=24971
     Region          35..181
                     /region_name="Hint"
                     /note="Hedgehog/Intein domain, found in Hedgehog proteins
                     as well as proteins which contain inteins and undergo
                     protein splicing (e.g. DnaB, RIR1-2, GyrA and Pol). In
                     protein splicing an intervening polypeptide sequence - the
                     intein - is excised from a protein; cl22434"
                     /db_xref="CDD:451395"
ORIGIN      
        1 mrryevvhll sngdiddftr iapahrafed sfgalargal lktdrgmvav edilpgdqvk
       61 tvtndfqtvh wrgamtlvpn aagqdprmgk ltrfsadslg igrpmpdlll gpsarlyhrs
      121 ptlqrvtgha aafvpasdfi dgvnivevqp qtpvqvfqlg ftnherivan gvevdshnpg
      181 arhelglrge mldlymglfp hmqriedfgm lmhprlsmhd ldfgiva
//
LOCUS       WP_235223942             269 aa            linear   BCT 02-MAR-2025
DEFINITION  EcsC family protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235223942
VERSION     WP_235223942.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 269)
  AUTHORS   Leskela,S., Kontinen,V.P. and Sarvas,M.
  TITLE     Molecular analysis of an operon in Bacillus subtilis encoding a
            novel ABC transporter with a role in exoprotein production,
            sporulation and competence
  JOURNAL   Microbiology (Reading) 142 (Pt 1), 71-77 (1996)
   PUBMED   8581172
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024197.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12787.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..269
                     /product="EcsC family protein"
                     /calculated_mol_wt=27920
     Region          <98..242
                     /region_name="EcsC"
                     /note="EcsC protein family; pfam12787"
                     /db_xref="CDD:463705"
ORIGIN      
        1 mtkdpdfmrv inpvdppapl tdaarvqika laqrqhaasg vlmqvvsflg gqvedglkll
       61 pdstrarlda aatrglrasy daagrsmggm grfiatdrah kalasmsgai ggfgglptal
      121 aelplattvi fravqriaae hgedpltvet raqclhvfgk ggpedgddgv dtsfvgarig
      181 lsgaainkli skvapkfatv lgqklasqtv pilgaaagag tnytfvsyyt dmahvhfglr
      241 alarihgtea vvdafhadla llkrplmka
//
LOCUS       WP_235223969             446 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235223969
VERSION     WP_235223969.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 446)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 446)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 446)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 446)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..446
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=47340
     Region          <145..431
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mlklltsttf iagvaltsaa yadghaegpy aayegttliv nfpshphyna vlevlpqfte
       61 etginvevdm lpyldmrerq tlelsldega ydmiayvvfs kadyvyadqi ynlapffmnp
      121 rladpnydag dlidgyvqni gvaggekgyl pgptgslygl pfgsetsvmy yrtdvfeelg
      181 lepaadydtl leqacaipea mpgmggvasr aasghqasha fllhlaplgg rvfdaawnpi
      241 insaegvaaa ealktivdcg pegssafgps eaanafaqgq aamfidsiaf aagfedesrs
      301 tvagnvgwaa hpagtraasq tggfgiaipr naenpeaafl laqwltskeg dlavamaggn
      361 psrfstyena elnakypwsa sfgealadad pdwrpiippw grinadigtt msqvltegld
      421 iqealdgiae rtqtlmaeeg yytwqq
//
LOCUS       WP_235223972             374 aa            linear   BCT 02-MAR-2025
DEFINITION  Tm-1-like ATP-binding domain-containing protein [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235223972
VERSION     WP_235223972.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06792.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..374
                     /product="Tm-1-like ATP-binding domain-containing protein"
                     /calculated_mol_wt=39287
     Region          1..360
                     /region_name="Tm-1-like"
                     /note="ATP-binding domain found in plant Tm-1-like (Tm-1L)
                     and similar proteins; cl02262"
                     /db_xref="CDD:470513"
ORIGIN      
        1 mnrvlligtf etkreelgyl asalrkhgld vmlldvslan ngviwsgaek laqmaakaea
       61 aaahitehsa ecsvaigvgg gtggeivlaa ikglpstypk ilittlafdp rpaladssit
      121 iiptlcdieg lntqlrqvfe naaaavaglt radrvegtgr lniaittlga tgragseiar
      181 glgdagyett vfhangygga aftrfvaegh asgvidmnvh elgrirlaga hvdmpgrfta
      241 ashlprvvlp galnfiglga vdtispehlr rpyyrhtnqf thikltasem adqaqawadk
      301 lnqstapcha ivpmggfshe drdggaihdp elrdiaadil eqnaanytvt rlphhintpe
      361 taqaavaalr aimp
//
LOCUS       WP_235223987             802 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6923 family protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235223987
VERSION     WP_235223987.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046473.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21959.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..802
                     /product="DUF6923 family protein"
                     /calculated_mol_wt=84032
     Region          3..223
                     /region_name="COG2931"
                     /note="Ca2+-binding protein, RTX toxin-related [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:442175"
     Region          <198..273
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; cl19911"
                     /db_xref="CDD:418717"
     Region          490..732
                     /region_name="COG2931"
                     /note="Ca2+-binding protein, RTX toxin-related [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:442175"
ORIGIN      
        1 mkdiltptvf dvlgtvendv iqhvegavgi nglkgsdris tasendlvag dmvgkewtfy
       61 dgewhydada vivsdygrtd tfsdtittga gndvllgngg ndmlfagagn dranagrgdd
      121 fvfggygndi lnlesgddfa eggygndtin ggsgddviyg dlqsenlldg agagaatfed
      181 fadsgtwtmt dtfgdavisq saqtiagety tisfglaanl aggqstgavd vmwngevidt
      241 vqttsgayet fqidvvstgs egelsfkave segdvtynfd gpivsyevef esggtsvvvd
      301 afapgqakly qvidgqlnvf dveskdyvtv gdqpdfkins igfnieddli ygvaksngtd
      361 slgnavgtsd ivmvdasget yrvgdgfygd yvgdfdgsgn lwtfqsgidr vsvvdvdqld
      421 adgnphidhy kfpkdlfsdr tydiafndkd gsfyavvspg kngqagkvvk idvsgvtega
      481 mptfteiait gtlygdemet glvkgafgav fldgegnlyf glnkgdhdld astgtegaif
      541 qvhadwetgq ayaefmseap ttgsndgavd praadpfaei dadaavlise ptltlvdggn
      601 dvlrggrgdd eiygnegddh ingganedll fggqgndklf ggggndvlhg edgkdklwgr
      661 adddemfgga gndylnggen ndslfggegv dkivggtgsd vieggagndh lwggswsgdg
      721 sedtfifssg tgkdyvhdfe vdrdivdlsq fftdrqsved attdhgwatv idlqlldggq
      781 dgdrivlksv saddlsgdnf if
//
LOCUS       WP_235223996             539 aa            linear   BCT 02-MAR-2025
DEFINITION  dihydroxyacetone kinase subunit DhaK [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235223996
VERSION     WP_235223996.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014753.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02733.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..539
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /EC_number="2.7.1.121"
                     /GO_function="GO:0004371 - glycerone kinase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006071 - glycerol metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=55106
     Region          2..538
                     /region_name="PRK14479"
                     /note="dihydroxyacetone kinase; Provisional; cl29418"
                     /db_xref="CDD:475197"
ORIGIN      
        1 mkqftnakqd mvteaidgti aasggtltrl dgyphirvvv rtdwdkskva lvsgggsghe
       61 pahagfvgeg mltaavcgdv faspsvdavl aailavtgpa gcllivknyt gdrlnfglaa
      121 erarafghkv svvivdddia lpdlpqargl agalfvhkia gamaanganl eactiaatrv
      181 iastrsigls ldtcsvpgsl kedrippgma elglgihgea gveqvasaga vdaitkmtdk
      241 lsvdmpktph vvlinnlgga sclemailtd sllssdfgqy irlvvgpgtm mtaldmhgfs
      301 islceladgd ekflkeaanv lawpgcrsie kptilplpdg ltpirapasa haptkaflth
      361 ccevliaaeg dlnlldaksg dgdtgstlsg asraligamd klpladhtql yraiglelsq
      421 tmggssgvll aiffaaagda sssgqtmrda lisgldrmrq igganpgdrt mvdallpale
      481 alsdglpaaa taarkgaeyt asltsakagr asyinaeqle ghidpgaeav arlfehlan
//
LOCUS       WP_235224001             789 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1989 domain-containing protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235224001
VERSION     WP_235224001.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020905.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09347.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..789
                     /product="DUF1989 domain-containing protein"
                     /calculated_mol_wt=86605
     Region          181..405
                     /region_name="YcgI"
                     /note="Uncharacterized conserved protein YcgI, DUF1989
                     family [Function unknown]; COG3665"
                     /db_xref="CDD:442882"
     Region          408..789
                     /region_name="GcvT"
                     /note="Glycine cleavage system protein T
                     (aminomethyltransferase) [Amino acid transport and
                     metabolism]; COG0404"
                     /db_xref="CDD:440173"
ORIGIN      
        1 mlddypkvqs gppkpssvir pqvfsmppgt eryvvegqga vlipietgdq itiindeggq
       61 rceivvcdpk grvdagiiga athgdagglk alldsdtqsl rglrmgldar gidvagaqav
      121 hlfetttpak teasftatrd gsviiaapgg vmdsetqdta tplvvmikra vlkshvkfel
      181 pdpladpvad irvhtqtaea ffvkagdyiq iidvdgrqct dfecfsarkl dkgiehaldv
      241 tttrtlmgha ypmpglhaky ydqemvplve vvqdtcgrhd afalacsaky yddigypghv
      301 ncsenfnkal gkfgvtgrpg wmainfffnt flddhgvmys depwsrpgdy vllraltdiv
      361 cvssacpddt taangwnptd ihvrtysgke tfqraiairt tpdsepkmtk qtgfhdsfak
      421 htrnfieykg ywlangfaev gpieeyhacr ekavimdlsp lrkfeitgpd aealcqyaft
      481 rniktlaigg vvytamcyeh ggmiddgtvf rlgkdnfrwi ggddyggewl relaekhglk
      541 alvrsstdql hnvavqgpes rdllrkitwt aphnpefdql gwfrftparl hnesgtpfvl
      601 srtgytgelg yevmchpkdc aeifdaiwda gqdhglkpmg lealdmvrie aglifagydf
      661 sdqtdpfeag igftcplksk tddfvgrdal irrkehpmkk lvgleidsnv dvghgdcihi
      721 graqigeits amrspllkkh ialaridvah aepgteveig kldghqmrlp ariaetlaay
      781 dptkekprs
//
LOCUS       WP_235224004             444 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-binding domain-containing protein [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235224004
VERSION     WP_235224004.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025114.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13738.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..444
                     /product="NAD(P)-binding domain-containing protein"
                     /calculated_mol_wt=50346
     Region          2..359
                     /region_name="PLN02172"
                     /note="flavin-containing monooxygenase FMO GS-OX"
                     /db_xref="CDD:215116"
ORIGIN      
        1 mtkriaviga gpsglaqlra fqsaaaqgad ipeivcfekq snwgglwnyt wrtgldeyge
       61 pvhgsmyryl wsngpkegle fadysfeehf gkqiasyppr avlfdyiqgr vqkagvrdwi
      121 kfehavrwve kedgtfnvtv cnlpedhtyt evfdhvivcn ghfstpnvpq fdgfesfkgr
      181 vlhahdfrda mefkdkdili vgtsysaedi gsqcwkygak sitvshrtaa mgydwpdnwa
      241 evpllthvdg ntahfkdgts rdvdavilct gykhhfpflp dalrlktanr latsdlykgv
      301 ayvhdpdlfy igmqdqwftf nmfdaqawwa rdvimgriai pdhatmeadv adriaredag
      361 eddydaiwyq gdyikelvae tdypsfdleg acqafkawkg hkkqgimtfr dngyksvitg
      421 tmapkhhtpw idalddslse ylkn
//
LOCUS       WP_235224127             593 aa            linear   BCT 02-MAR-2025
DEFINITION  SLC13 family permease [Octadecabacter dasysiphoniae].
ACCESSION   WP_235224127
VERSION     WP_235224127.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015557.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03600.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..593
                     /product="SLC13 family permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=63212
     Region          69..593
                     /region_name="CitT"
                     /note="Di- and tricarboxylate antiporter [Carbohydrate
                     transport and metabolism]; COG0471"
                     /db_xref="CDD:440239"
     Region          228..>284
                     /region_name="TrkA_C"
                     /note="TrkA-C domain; pfam02080"
                     /db_xref="CDD:460440"
     Region          <300..380
                     /region_name="KhtT"
                     /note="K+/H+ antiporter KhtSTU, c-di-AMP-binding
                     regulatory subunit KhtT, contains RCK_C (TrkA_C) domain
                     [Inorganic ion transport and metabolism, Signal
                     transduction mechanisms]; COG0490"
                     /db_xref="CDD:440256"
ORIGIN      
        1 mveifdisqt gqavltltvv aimfvlflre typtevvalt gvslllasgv lpydqalsvl
       61 snpapwtiaa mfivmgalvr tgsldaltal aernakdrpm vslaalmafv vfasaivsnt
      121 pvvvvmipif vqlaktmgls asklliplsy gailggtltl igtstnllvd gvaraeglep
      181 ftifevtplg ivlviwgmiy lgviaprllp drdsmanlls drskmrffte avippdsnli
      241 grevtgvqlf kregvrlvdv vrgdqslrrn lqgvelavgd rvvlrtamte llslqatkdl
      301 rrvdqvsave sqtvevlitp gckmigrtlg alrlrrrfav yvlavhrrnq nigrqldelv
      361 vrvgdtllle gssediqrla temdlvdvsh psarayrraq apialaalvm ivglaafgva
      421 pifllsilav aivlitrcid adeafsfvdg rlltlifsml aigaalqasg avslivegva
      481 palgmlppfl iiwavyllts vltemvsnna vavvvtpiai glaielgydp rplvvavmva
      541 asasfatpig yqtntlvygp ggykfsdflk vgvplnlsig ilasavipyi wpl
//
LOCUS       WP_235224170             899 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235224170
VERSION     WP_235224170.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..899
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..899
                     /product="helicase-related protein"
                     /calculated_mol_wt=99326
     Region          6..>113
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(14..20,94)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          166..281
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            261
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350171"
     Region          <797..>891
                     /region_name="PRK10819"
                     /note="transport protein TonB; Provisional"
                     /db_xref="CDD:236768"
ORIGIN      
        1 mnargrvtav lgptntgkth yaiermlghk tgviglplrl larevydriv avrgpgvval
       61 ltgeerivpp raaywvctve ampqdigadf vavdeiqlca dldrghvftd rllrmrglhe
      121 tlfmgaetmw gaiasmvpea efikrerfst ltysgskkis rmparsaivg fsvenvyaia
      181 ellrrqkgga avvmgalspr trnaqvemyq ngdvdylvat daigmglnld idhvafssit
      241 kydgrrmrhl mpnelaqiag ragrhmnkgt fgvtgeaptl degvvdaiqn nqfapvkklq
      301 wrnarlqfgs vgrliqtlee rtddpwltrv resddlgalk avsadaevaa ratdgpsvql
      361 lwdvcripdf rgisnvehaq lltdiynflh ekgrvpddwl agrvnridrt dgdidalskr
      421 layirtwtyv aqrkgwvsne shwrdvtrav edrlsdalha rltarfvdrr tsvllrrlnq
      481 keglvadvnd kgevtvegqf vgkiegfrfr qdqnataeea ktiraasiqa lapqfhlrad
      541 rfynapdtei dfteqgglmw gteavgklva gqdalkptvv afvddeagtd vaekvqrrlq
      601 hfidrkiata fepmlkmqnd delaglakgf afrmvegfgv itrgevadev kaleqdarga
      661 lrkhgvrfgq ftifmplllk paptrlrlvl wslskglqdf peapppglvt vptisglpdg
      721 tytmsgyraa gdrairidml erladmlrdq ntragfeata dmlsitgmtl dqfanlmegl
      781 gykaekgere kvktpavvep apegetpnpi pegesiapve aadeapemev fytitwapkr
      841 sprpqndqpk rkgatkgkrg gkpqrdnkaq nfsarppkke kaidpdnpfa aalaglkkd
//
LOCUS       WP_235223510             109 aa            linear   BCT 02-MAR-2025
DEFINITION  type II toxin-antitoxin system RelB/DinJ family antitoxin
            [Oscillibacter valericigenes].
ACCESSION   WP_235223510
VERSION     WP_235223510.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 109)
  AUTHORS   Pedersen,K., Christensen,S.K. and Gerdes,K.
  TITLE     Rapid induction and reversal of a bacteriostatic condition by
            controlled expression of toxins and antitoxins
  JOURNAL   Mol Microbiol 45 (2), 501-510 (2002)
   PUBMED   12123459
REFERENCE   2  (residues 1 to 109)
  AUTHORS   Galvani,C., Terry,J. and Ishiguro,E.E.
  TITLE     Purification of the RelB and RelE proteins of Escherichia coli:
            RelE binds to RelB and to ribosomes
  JOURNAL   J Bacteriol 183 (8), 2700-2703 (2001)
   PUBMED   11274135
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016136.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04221.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..109
                     /product="type II toxin-antitoxin system RelB/DinJ family
                     antitoxin"
                     /calculated_mol_wt=12391
     Region          1..>54
                     /region_name="RelB"
                     /note="Antitoxin component of the RelBE or YafQ-DinJ
                     toxin-antitoxin module [Defense mechanisms]; COG3077"
                     /db_xref="CDD:442311"
ORIGIN      
        1 matntirlsd gvkeetcria gqmgltfnsv vnillkkfne tkgfpfpvvl eneqksvfdm
       61 steeftalcr qaveerdtvp rmeyvttidk dtgllmkkyw dgrveyvid
//
LOCUS       WP_235224182             232 aa            linear   BCT 02-MAR-2025
DEFINITION  glutathione S-transferase N-terminal domain-containing protein
            [Octadecabacter dasysiphoniae].
ACCESSION   WP_235224182
VERSION     WP_235224182.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024809.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13417.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..232
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /GO_process="GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=25977
     Region          3..221
                     /region_name="PRK13972"
                     /note="GSH-dependent disulfide bond oxidoreductase;
                     Provisional"
                     /db_xref="CDD:172475"
ORIGIN      
        1 mtidlyywpt pngwktticl eemgldyavh linigagdqf apdflkiapn nrmpaivdpd
       61 gpdgapisvf esgailqyla rktgqfggpt erdriavdqw lmwqmgglgp magqahhflk
      121 yapnmdppqd isyakdryra etarlygvld rqlakhefva gdfysiadms iwgwaslweg
      181 qqqtlddkph marwletvsa rpgvergrav aaekrgdykg dkaaqdrlfk rd
//
LOCUS       WP_235224190             182 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6446 family protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235224190
VERSION     WP_235224190.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040106.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20044.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..182
                     /product="DUF6446 family protein"
                     /calculated_mol_wt=19416
     Region          42..176
                     /region_name="DUF6446"
                     /note="Family of unknown function (DUF6446); pfam20044"
                     /db_xref="CDD:466272"
ORIGIN      
        1 mnavrfwiva ilgcafagga fmyynlvyag yaeltadqvg eiqllnvatd qpeailsqnv
       61 kgidtvkdgv rlsgaisyrv cfdtpssqam lsetyvimdd avplnapswf dcfdaqaiga
      121 aletgdaiaf lseenisygv drvvavlpdg rgfvwhqlnp cgeavfagdn tpdgcpelpe
      181 df
//
LOCUS       WP_235224192             849 aa            linear   BCT 02-MAR-2025
DEFINITION  putative PEP-binding protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235224192
VERSION     WP_235224192.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 849)
  AUTHORS   Lim,K., Read,R.J., Chen,C.C., Tempczyk,A., Wei,M., Ye,D., Wu,C.,
            Dunaway-Mariano,D. and Herzberg,O.
  TITLE     Swiveling domain mechanism in pyruvate phosphate dikinase
  JOURNAL   Biochemistry 46 (51), 14845-14853 (2007)
   PUBMED   18052212
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014895.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02896.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..849
                     /product="putative PEP-binding protein"
                     /GO_function="GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA]"
                     /GO_process="GO:0016310 - phosphorylation [Evidence IEA]"
                     /calculated_mol_wt=91956
     Region          22..833
                     /region_name="pyru_phos_dikin"
                     /note="pyruvate, phosphate dikinase; TIGR01828"
                     /db_xref="CDD:273822"
ORIGIN      
        1 mqkvitlkdl clvtktaqma anihggrakc lqrlirldmp vpttvalsfd avraiaagqv
       61 adipqilrhf eenpllsvrp ssmdpdwggp gamlnigmnd akhaqlcetl gedpatrlym
      121 ryiqsfavev arldpeefyl pdqpslaalk amlatyetem daefpqdage qlgevlrsma
      181 rtwegttarl lrqakgapad aglglvvqem alamgpgisg sgviqfvdnt tgtaqingrf
      241 apqathteii rdsanaiylt rdprgpsled eapdafqkli efgalgrirl reemeikfil
      301 rdgeltilda irvqrssraa vriavdlats gviakedavm rvqpaalsel lhrqvdrrak
      361 rdflvrgiaa spgaasgrlv fsaneaqasa areepcvlvr rettpedirg mhaaaavvtl
      421 rggvtshaav igrgmglpci vgaadmdide kkreitvpdg rtfqagdmvt vdgttgqmla
      481 gqpamleaal ddafqtllsw adavrdigir anadtpadaq tarnfeaegi glcrtehmff
      541 dgdrvdlmre mifaetpegl gavlerllpl qradfkdlfr imqglpvcir lfdaplhefl
      601 pvgksgmrel aevldvplaq itarvddlse ynpmlgqrgv rlgisvpeiy dmqaraifea
      661 taaasetsga ivpeimiplv samrevelvq sridavaaav rtetgvdfey klgvmvetpr
      721 aalraediae haaflsfgtn dltqmtygls rddagkfmsd yvkqqvyeed pfhtldlegv
      781 gellklgaer grrgrpdvtl sicgehggdt naiafcraqg fdyvscspfr vpvarlsaaq
      841 lalkdkigq
//
LOCUS       WP_235224202             377 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235224202
VERSION     WP_235224202.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..377
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /calculated_mol_wt=40348
     Region          27..355
                     /region_name="PucG"
                     /note="Archaeal aspartate aminotransferase or a related
                     aminotransferase, includes purine catabolism protein PucG
                     [Amino acid transport and metabolism, Nucleotide transport
                     and metabolism]; COG0075"
                     /db_xref="CDD:439845"
ORIGIN      
        1 mstkslrtpv dpnglmefsv vftdrslnhm skafqgvmkd ldallcdvyg adgvaivpgg
       61 gtyameavar qfggaahtmi vrngwfsyrw sqifdagdft akttvhkarq tgndsrapfa
      121 papidevtaa irdakpdvvf aphvetsagi ilpddyital aeaahdvgal lvldciasgc
      181 awvdmkatgv dvlisapqkg wssspsaglv mmsaralerl etttsnsftv dlkkwrqime
      241 aylgdghayh atmptdalrd frdtmvesaa fgfdalrdaq wylgdgvrky faekgfksva
      301 adgfgapgvv vcytddpdiq ngskfagagm qiaagvplav depadfrtfr iglfgidklr
      361 tpdvtlktft dvadqvl
//
LOCUS       WP_235224293             176 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2314 domain-containing protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235224293
VERSION     WP_235224293.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021584.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10077.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..176
                     /product="DUF2314 domain-containing protein"
                     /calculated_mol_wt=18719
     Region          26..170
                     /region_name="DUF2314"
                     /note="Uncharacterized protein conserved in bacteria
                     (DUF2314); cl19625"
                     /db_xref="CDD:473197"
ORIGIN      
        1 mkklmigvvi laglwfynng tdpvssdaan gdpveafasd daqmnaamda alttlpafle
       61 nqtddagnai gqtsvkvafe igtdafeiiw vsgfnwdggv nmagflanqp nymgdlnagd
      121 rvefttdmvr dwsltepdgt mwgnyttrvi vpqldadtaa alnamlspdp vpsdwn
//
LOCUS       WP_235224314             131 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235224314
VERSION     WP_235224314.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..131
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=14608
     Region          1..115
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(2..4,18,37..39)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133398"
ORIGIN      
        1 mmigelakrs glskdglrhy ealglihssp vaagsrtyri yddttlerls lislakrlgf
       61 klreltesld rlfsdtvsre eraqiisekv sevdlkieel kvardllaaf avtpdkefad
      121 avlkdmglwl q
//
LOCUS       WP_235224380            1058 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235224380
VERSION     WP_235224380.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..1058
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=105796
     Region          <37..73
                     /region_name="biofilm_BapA_N"
                     /note="BapA prefix-like domain; NF033677"
                     /db_xref="CDD:411274"
     Region          <275..1058
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
ORIGIN      
        1 msainfvvrd vagnisrgsv agegvpssli vgagadvsln ltqgqivsyt rqgqaleitl
       61 idgrvivieg yfttegvsen elflsadgyl tevdltqgag adyfanysvp dtagkfaane
      121 dlfhmrgadv mladsyvped devgmlalgg laplfgwgga avaagaaalv ggggsggpda
      181 pavevtvgad stdhvvnead hadgvdvggt gtpggevavt vqgttetttv diagnwvvtf
      241 dpadietgey etpidvsitn sggtttitdt lvvdtiigvd anasggtdgv ingvehaagv
      301 tltgtvtggd tvvvtidgtd fdatvtgttw tldvpasvlg egeytqtvti tatdpagnas
      361 sttstvvvdt vtsvtldtss vggadnvvng tehaggvtln gtaqagssvv vtmgtvsqtv
      421 iatsagtwta tytsaqvptg eetlnvtava tdaagntasa sgtvtvdtfv neldltsnsa
      481 ggadgvvnfd esgqaitmtg tveagstvsv slhgvvmgat vdanggwsvt ypggtlpgge
      541 ydttvtvtat daagntssls dsvtvdtvag dlalstqpie iddvvnmvea qdgviingta
      601 tpglivtvgf gsssmnvlaq pngtwsanfp asmvpadtas aqitasitda agnykevsdt
      661 vavdtvvqph ewsanaiegd nvinaneaan gvvlsgttep nstimvefgg evvnvvsgas
      721 gawsanfssg svnandeyma smkatatdpa gnvsvitssv evdtwvnnlt tadpvegdnv
      781 vnaaeaadgv tlngtveags tvmvsfahpn gtitqeaivl angnwsvtya gadvplgeyd
      841 anitiaatda ngntdsitdt fkvdtsapva pgienvvldd dgveaikita tdndvavtei
      901 tssgstaqla dqddgdlnna gtkiefefda plpdgshlvv netdsagndn atylvleetg
      961 tntvdmsgld gfdigaidls fakdaeltld latieglsdt dnnlvihggv gdndqvtivg
     1021 asdsgtstti ngesydiytm gddaqified gitvntti
//
LOCUS       WP_235224398             422 aa            linear   BCT 02-MAR-2025
DEFINITION  short-chain fatty acyl-CoA regulator family protein [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235224398
VERSION     WP_235224398.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 422)
  AUTHORS   Tang,S., Hicks,N.D., Cheng,Y.S., Silva,A., Fortune,S.M. and
            Sacchettini,J.C.
  TITLE     Structural and functional insight into the Mycobacterium
            tuberculosis protein PrpR reveals a novel type of transcription
            factor
  JOURNAL   Nucleic Acids Res 47 (18), 9934-9949 (2019)
   PUBMED   31504787
REFERENCE   2  (residues 1 to 422)
  AUTHORS   Carter,M.S. and Alber,B.E.
  TITLE     Transcriptional Regulation by the Short-Chain Fatty Acyl Coenzyme A
            Regulator (ScfR) PccR Controls Propionyl Coenzyme A Assimilation by
            Rhodobacter sphaeroides
  JOURNAL   J Bacteriol 197 (19), 3048-3056 (2015)
   PUBMED   26170412
REFERENCE   3  (residues 1 to 422)
  AUTHORS   Plassmeier,J., Persicke,M., Puhler,A., Sterthoff,C., Ruckert,C. and
            Kalinowski,J.
  TITLE     Molecular characterization of PrpR, the transcriptional activator
            of propionate catabolism in Corynebacterium glutamicum
  JOURNAL   J Biotechnol 159 (1-2), 1-11 (2012)
   PUBMED   21933687
REFERENCE   4  (residues 1 to 422)
  AUTHORS   Gerstmeir,R., Cramer,A., Dangel,P., Schaffer,S. and Eikmanns,B.J.
  TITLE     RamB, a novel transcriptional regulator of genes involved in
            acetate metabolism of Corynebacterium glutamicum
  JOURNAL   J Bacteriol 186 (9), 2798-2809 (2004)
   PUBMED   15090522
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09856.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..422
                     /product="short-chain fatty acyl-CoA regulator family
                     protein"
                     /calculated_mol_wt=44949
     Region          26..421
                     /region_name="COG3800"
                     /note="Predicted transcriptional regulator [General
                     function prediction only]"
                     /db_xref="CDD:443013"
ORIGIN      
        1 maervltgtr vrnrrldigl rqahvakaig isgsylnlie hnrrrigarl lgdlarvlei
       61 daklledeta asvlgpvsea aasfpgisve daraeelvar fpgwaalvaa qrariiqlea
      121 rtealsnrla hdtqiatslh evistatair stasilaetp dldadwrgrf htnidtdsar
      181 laessqallg fldmemeggg aqdaspleqa eaimaqngfy lpqsetaepa tfdasadkat
      241 hailtnwaqg aardaaalpl aefmqaaral afdparlaar fqvpldmilr rlthlpasad
      301 aplmglavcd gagvvtfqkp vldfrlprsg aacplwplyq amsqpgralr rvvrlpgaar
      361 tpfecfavag avgdvafgae prvvatmlvr partnetpdv vgpgcrvcpv ndcaarrhps
      421 ll
//
LOCUS       WP_235224294             128 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235224294
VERSION     WP_235224294.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 128)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 128)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..128
                     /product="VOC family protein"
                     /calculated_mol_wt=14156
     Region          7..125
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mtmrlstlsi lvpdydmgla ffvgqlgfdl ledtdqghkr wikvapkgae tafliakatt
       61 pdqiaaignq gggrvwlile tddfardhaa ylnagiifee sprhepygiv avfrdpfgnr
      121 wdlieftd
//
LOCUS       WP_235224401             894 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235224401
VERSION     WP_235224401.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 894)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 894)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 894)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 894)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..894
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..894
                     /product="ATP-binding protein"
                     /calculated_mol_wt=95493
     Region          6..514
                     /region_name="SLC5sbd"
                     /note="Solute carrier 5 family, sodium/glucose
                     transporters and related proteins; solute-binding domain;
                     cd10322"
                     /db_xref="CDD:271357"
     Site            order(48,51,337,340..341)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271357"
     Region          655..890
                     /region_name="KdpD"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; COG2205"
                     /db_xref="CDD:441807"
ORIGIN      
        1 misfnllvfv siayvvflfa vafaaerraa mgktawlrss aiytlslsiy ctawtfygav
       61 gyaarsglef ltiylgptlv migwwwlvrk lvrigrtqrl tsiadlissr fgkstflgvl
      121 vtvlaivgtt pyialqlqsv tqsiavfaas sgevweagdl ngaamwvaag lavftvlfgt
      181 rnldaherhh givlaiavea vvklfaliav gvfvvwgvag gigptmdlid asaqsqwapq
      241 psrwiglifv saaaflclpr mfqvlvvens dertvstasw afptylllms lfvvpiavvg
      301 ldlmpaganp dlfvvtlpls egreglails flggfssats mvivatlala tmvsnhivvp
      361 swlnartpga vvsgdvrdvv vmsrrisigv ilalgyiyfr lsggggalaa iglvsftgvt
      421 qvlpamiggv fwrganrwga gaaisigfav wawtqflpsf gvdavisqav fdqgpfginw
      481 lrpyalfgie gidpfvhavf wsmllntgal ivvsiltfpn plerlqgaqf vnvydyssga
      541 rtwsqsaaqa edllvmaqri lggaeaqsif qaearsqgkd gflpdvtpdf isrlerelsg
      601 svgaataham maqltegamv svddliavad etaqimeyss qleaksaeqd rtaralrean
      661 ekltalsiqk daflsqishe lrtpmtsirs fsdilrdgei edearkkfag iihdetnrlt
      721 rllddlldlg vlesgqvqln igegtlaevl draimasgva pddlvisrra vnegvplttd
      781 lerlaqvfin lisnaakycm addpelriiv rqingqtvvd fcdngagvpk esqsmifekf
      841 srledagkag gaglglsicr qimtalggdv tylpgqggag frvtipaava laaq
//
LOCUS       WP_235224402             320 aa            linear   BCT 02-MAR-2025
DEFINITION  FliM/FliN family flagellar motor switch protein [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235224402
VERSION     WP_235224402.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 320)
  AUTHORS   Paul,K. and Blair,D.F.
  TITLE     Organization of FliN subunits in the flagellar motor of Escherichia
            coli
  JOURNAL   J Bacteriol 188 (7), 2502-2511 (2006)
   PUBMED   16547037
REFERENCE   2  (residues 1 to 320)
  AUTHORS   Brown,P.N., Mathews,M.A., Joss,L.A., Hill,C.P. and Blair,D.F.
  TITLE     Crystal structure of the flagellar rotor protein FliN from
            Thermotoga maritima
  JOURNAL   J Bacteriol 187 (8), 2890-2902 (2005)
   PUBMED   15805535
REFERENCE   3  (residues 1 to 320)
  AUTHORS   Chen,L.M., Kaniga,K. and Galan,J.E.
  TITLE     Salmonella spp. are cytotoxic for cultured macrophages
  JOURNAL   Mol Microbiol 21 (5), 1101-1115 (1996)
   PUBMED   8885278
REFERENCE   4  (residues 1 to 320)
  AUTHORS   Bischoff,D.S. and Ordal,G.W.
  TITLE     Identification and characterization of FliY, a novel component of
            the Bacillus subtilis flagellar switch complex
  JOURNAL   Mol Microbiol 6 (18), 2715-2723 (1992)
   PUBMED   1447979
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013236.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01052.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..320
                     /product="FliM/FliN family flagellar motor switch protein"
                     /calculated_mol_wt=33455
     Region          <177..287
                     /region_name="FliM"
                     /note="Flagellar motor switch protein FliM [Cell
                     motility]; COG1868"
                     /db_xref="CDD:441473"
ORIGIN      
        1 mdalnavlah klgltppepd pdaqgpaptp mrqmrralgr aadkavglsa svlgiaeenl
       61 eaealiesgp edwvviglrd gsnpgltglf linpalrsal vemqtmgnll aasederkvt
      121 rtdavlavpf asqllrelad vgfgagvldp aaydmgpmdd lrtaglvmtp glyrswrisv
      181 qlggserqge mliamrpdvt tpiaahdtap ewsmalrgav eeapadleav larmvlpmsk
      241 ieefevgqvl qlagttvgsv slvgpggqkv amarlgqvag kravrvevet ielqddtpra
      301 aplpeleipp vdglidsgaa
//
LOCUS       WP_235224447              85 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6522 family protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235224447
VERSION     WP_235224447.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040453.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20132.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..85
                     /product="DUF6522 family protein"
                     /calculated_mol_wt=9278
     Region          2..84
                     /region_name="DUF6522"
                     /note="Family of unknown function (DUF6522); pfam20132"
                     /db_xref="CDD:466299"
ORIGIN      
        1 mkiqiendqp vidaqdlgpl lglhpaevqa kmrsghitst yevgqgedag rfrltffhag
       61 krvrltcned gdviskirtd tgtrt
//
LOCUS       WP_235224451             307 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235224451
VERSION     WP_235224451.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..307
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=32907
     Region          18..>139
                     /region_name="PRK09801"
                     /note="LysR family transcriptional regulator"
                     /db_xref="CDD:182085"
     Region          95..291
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(110..111,113..114,117,121,123..129,221..224,225,
                     231..232,234..235)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176102"
ORIGIN      
        1 maltlkamty fttalrhgni akaaaelnia asaisaaidq veaefdltlv trqrargiqa
       61 nasgravark cirllddyqs llseggelkq slsgtlrigy yapiapaflp qifdaflpeg
      121 tnvtleleec dndqaqdglm ngkydailfv aedarpaiay dplieahpyc llpvahplar
      181 qsvvsmadla qeplvvlnrp vaaayydglf rtgardapva ayatstemvr slvaagrgca
      241 ilnmcprtse tysgekvvar pisddlaplt lavgydktrp rrsvqdfvna crshfaksgp
      301 arcvvgr
//
LOCUS       WP_235224495             195 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235224495
VERSION     WP_235224495.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024934.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13545.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..195
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=21530
     Region          2..189
                     /region_name="fixK"
                     /note="transcriptional regulator FixK; Provisional;
                     PRK09391"
                     /db_xref="CDD:236494"
ORIGIN      
        1 mkpgaylyfe gddvewlyqv ssgvlrltrl langrrqvia fgypgdivgf aadglhhtdc
       61 ealtdvclhp irrshlesgd gdpalhlall kaalceisam qdhfmmlgrk sateklasfl
      121 cvlservgqd lgpnrqinlp mcrsdiadfl glttetisrt ftqlrksrii eidniytiii
      181 qrptallrls egand
//
LOCUS       WP_235224492             279 aa            linear   BCT 02-MAR-2025
DEFINITION  universal stress protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235224492
VERSION     WP_235224492.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 279)
  AUTHORS   Sousa,M.C. and McKay,D.B.
  TITLE     Structure of the universal stress protein of Haemophilus influenzae
  JOURNAL   Structure 9 (12), 1135-1141 (2001)
   PUBMED   11738040
REFERENCE   2  (residues 1 to 279)
  AUTHORS   Zarembinski,T.I., Hung,L.W., Mueller-Dieckmann,H.J., Kim,K.K.,
            Yokota,H., Kim,R. and Kim,S.H.
  TITLE     Structure-based assignment of the biochemical function of a
            hypothetical protein: a test case of structural genomics
  JOURNAL   Proc Natl Acad Sci U S A 95 (26), 15189-15193 (1998)
   PUBMED   9860944
REFERENCE   3  (residues 1 to 279)
  AUTHORS   Nystrom,T. and Neidhardt,F.C.
  TITLE     Expression and role of the universal stress protein, UspA, of
            Escherichia coli during growth arrest
  JOURNAL   Mol Microbiol 11 (3), 537-544 (1994)
   PUBMED   8152377
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012791.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00582.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..279
                     /product="universal stress protein"
                     /calculated_mol_wt=30488
     Region          5..145
                     /region_name="USP-like"
                     /note="universal stress protein (USP) and similar
                     proteins; cd00293"
                     /db_xref="CDD:467483"
     Region          157..276
                     /region_name="UspA"
                     /note="Nucleotide-binding universal stress protein, UspA
                     family [Signal transduction mechanisms]; COG0589"
                     /db_xref="CDD:440354"
ORIGIN      
        1 mapktilvcl ttsehaetll rcavplarkh gahliglhti ealvvypgia mhipdtvfas
       61 fnesqkkead airdifekht dpeefvsefr llhakaqsas drmivsaraa dlvimahedk
      121 dndrydqrha qaqvirksgr pvivvpldyd gpeiganill gwsdtreaar aahdmltvad
      181 dgaaltvlrv gknpqdalkd sdtidvaemf arhglkatld hrdpdnhsia dvlqnvafet
      241 gadlivtgaf ghsraydfvl gtttyallkd qklpvlfsk
//
LOCUS       WP_235223810             212 aa            linear   BCT 02-MAR-2025
DEFINITION  YjbF family lipoprotein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235223810
VERSION     WP_235223810.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 212)
  AUTHORS   Sathiyamoorthy,K., Mills,E., Franzmann,T.M., Rosenshine,I. and
            Saper,M.A.
  TITLE     The crystal structure of Escherichia coli group 4 capsule protein
            GfcC reveals a domain organization resembling that of Wza
  JOURNAL   Biochemistry 50 (24), 5465-5476 (2011)
   PUBMED   21449614
REFERENCE   2  (residues 1 to 212)
  AUTHORS   Ferrieres,L., Aslam,S.N., Cooper,R.M. and Clarke,D.J.
  TITLE     The yjbEFGH locus in Escherichia coli K-12 is an operon encoding
            proteins involved in exopolysaccharide production
  JOURNAL   Microbiology (Reading) 153 (Pt 4), 1070-1080 (2007)
   PUBMED   17379715
REFERENCE   3  (residues 1 to 212)
  AUTHORS   Peleg,A., Shifrin,Y., Ilan,O., Nadler-Yona,C., Nov,S., Koby,S.,
            Baruch,K., Altuvia,S., Elgrably-Weiss,M., Abe,C.M., Knutton,S.,
            Saper,M.A. and Rosenshine,I.
  TITLE     Identification of an Escherichia coli operon required for formation
            of the O-antigen capsule
  JOURNAL   J Bacteriol 187 (15), 5259-5266 (2005)
   PUBMED   16030220
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022552.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11102.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..212
                     /product="YjbF family lipoprotein"
                     /calculated_mol_wt=22779
     Region          48..205
                     /region_name="YjbF"
                     /note="Group 4 capsule polysaccharide lipoprotein gfcB,
                     YjbF; pfam11102"
                     /db_xref="CDD:431654"
ORIGIN      
        1 mkynamtvgl tallvlggcg qtedtvsgia lsrlqaigkp apvrlsyeat raqvtpelle
       61 qigipviiah leslggttlm aerarngavt tfmsdqrisi sfnqgvivat rglgndlmsa
      121 nvtevvasld darsgtaatr ihtyldgenq tqtrqfncsy npdpegkiie acrdgdvtfe
      181 nqywrdqagv pvasrqwigp qlgylivehl qn
//
LOCUS       WP_235224592             372 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235224592
VERSION     WP_235224592.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..372
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=40586
     Region          3..103
                     /region_name="GGCT_like"
                     /note="GGCT-like domains, also called AIG2-like family.
                     Gamma-glutamyl cyclotransferase (GGCT) catalyzes the
                     formation of pyroglutamic acid (5-oxoproline) from
                     dipeptides containing gamma-glutamyl, and is a dimeric
                     protein. In Homo sapiens, the protein is...; cd06661"
                     /db_xref="CDD:119400"
     Site            order(50..51,53,83..86,88,100,103)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119400"
     Site            77
                     /site_type="active"
                     /note="putative catalytic residue [active]"
                     /db_xref="CDD:119400"
     Region          177..365
                     /region_name="NUDIX_ADPRase"
                     /note="Adp Ribose Pyrophosphatase; cd24155"
                     /db_xref="CDD:467603"
ORIGIN      
        1 mdlfifgtll hvplleavsg dadvskrlvw aarpgysvsr vsgqvfpmih patngvaegi
       61 ivqglddtal erldyyekaf ghdrvefvvl dayeqsrtvt aylpepdrws taelwdrdgw
      121 iaragelttm taieamsvmd rmaapemgaq ypammaraas rqraakdtgt gglgradvhv
      181 lhaskpyagf fnveeldlsf rrfdgsmsdp vnravlvgvd caillpydpv rdrvmvveqf
      241 rpgaylrgdp npwtlepiag ridpgeeped aarreaheea gvtvtdlhcv saaypspgst
      301 telfytyigi adlpdgangt gglvaeaedi rshimtwaef daalnagkfr lmpllvaglw
      361 larnrdrlra sa
//
LOCUS       WP_235224607             325 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerophosphodiester phosphodiesterase family protein
            [Octadecabacter dasysiphoniae].
ACCESSION   WP_235224607
VERSION     WP_235224607.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 325)
  AUTHORS   Kim,H. and Farrand,S.K.
  TITLE     Characterization of the acc operon from the nopaline-type Ti
            plasmid pTiC58, which encodes utilization of agrocinopines A and B
            and susceptibility to agrocin 84
  JOURNAL   J Bacteriol 179 (23), 7559-7572 (1997)
   PUBMED   9393724
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03009.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..325
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /GO_function="GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=35549
     Region          12..319
                     /region_name="PI-PLCc_GDPD_SF"
                     /note="Catalytic domain of phosphoinositide-specific
                     phospholipase C-like phosphodiesterases superfamily;
                     cl14615"
                     /db_xref="CDD:472694"
     Site            order(41,90,92,171,203,278)
                     /site_type="active"
                     /db_xref="CDD:176554"
     Site            order(41,105)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176554"
ORIGIN      
        1 mrkklkslsi vlvlmvvalw agntslfvag lenhdtrlia hrgvhqvyag tdrsidscha
       61 apvetiehpf ventlpsiae afrlgadvve idvhltsdnv favfhdwtld crtdgtgvth
      121 kqsfaylqtl dvayriddat gtyplrgqgv glmpsltdvl gvdwdgqlli nfksnraedg
      181 aefarrlael rmsdqvfgvy ggapptraai emtpglrgfd raslkgcltr ylalgwsghi
      241 pescrdtfvv vpqnytgllw gwphrftkrl gavgtdvvla gpydgtgfis sindidalsq
      301 vpdafdgyiw tdrieviapr imaed
//
LOCUS       WP_235224185             188 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235224185
VERSION     WP_235224185.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 188)
  AUTHORS   Watts,N.R. and Coombs,D.H.
  TITLE     Structure of the bacteriophage T4 baseplate as determined by
            chemical cross-linking
  JOURNAL   J Virol 64 (1), 143-154 (1990)
   PUBMED   2403438
REFERENCE   2  (residues 1 to 188)
  AUTHORS   Ishimoto,L.K., Ishimoto,K.S., Cascino,A., Cipollaro,M. and
            Eiserling,F.A.
  TITLE     The structure of three bacteriophage T4 genes required for
            tail-tube assembly
  JOURNAL   Virology 164 (1), 81-90 (1988)
   PUBMED   3363870
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018543.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06841.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..188
                     /product="phage tail protein"
                     /GO_function="GO:0005198 - structural molecule activity
                     [Evidence IEA]"
                     /calculated_mol_wt=20917
     Region          17..171
                     /region_name="Phage_T4_gp19"
                     /note="T4-like virus tail tube protein gp19; cl23998"
                     /db_xref="CDD:451650"
ORIGIN      
        1 mttppseypq npqrltpypn frfklkwsds sgkeiyvagv nrvsapshtt kvihhreggd
       61 pslthlapgq teysaitler gvsydtsfqe wankvfdfqs sqnlaeenps qfdvrknlii
      121 evyneagqiv laykvynawv sefqalsdld atgkpavviq sivmenegwe rdtsvetate
      181 psfslpas
//
LOCUS       WP_235224087             162 aa            linear   BCT 02-MAR-2025
DEFINITION  periplasmic heavy metal sensor [Octadecabacter dasysiphoniae].
ACCESSION   WP_235224087
VERSION     WP_235224087.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 162)
  AUTHORS   Pompidor,G., Maillard,A.P., Girard,E., Gambarelli,S., Kahn,R. and
            Coves,J.
  TITLE     X-ray structure of the metal-sensor CnrX in both the apo- and
            copper-bound forms
  JOURNAL   FEBS Lett 582 (28), 3954-3958 (2008)
   PUBMED   18992246
REFERENCE   2  (residues 1 to 162)
  AUTHORS   Noll,M., Petrukhin,K. and Lutsenko,S.
  TITLE     Identification of a novel transcription regulator from Proteus
            mirabilis, PMTR, revealed a possible role of YJAI protein in
            balancing zinc in Escherichia coli
  JOURNAL   J Biol Chem 273 (33), 21393-21401 (1998)
   PUBMED   9694902
REFERENCE   3  (residues 1 to 162)
  AUTHORS   Schmidt,T. and Schlegel,H.G.
  TITLE     Combined nickel-cobalt-cadmium resistance encoded by the ncc locus
            of Alcaligenes xylosoxidans 31A
  JOURNAL   J Bacteriol 176 (22), 7045-7054 (1994)
   PUBMED   7961470
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025173.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13801.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..162
                     /product="periplasmic heavy metal sensor"
                     /calculated_mol_wt=17952
     Region          4..158
                     /region_name="CnrX"
                     /note="Ni/Co/Cd-binding protein CnrX (heavy-metal
                     resistance) [Inorganic ion transport and metabolism];
                     COG5612"
                     /db_xref="CDD:444343"
ORIGIN      
        1 mseentkkrr wqrillvgsl alnlavvgvv agvafgggpk ermqrfdltv gpltramdnd
       61 rreavrdalr nsgafrpadr ngirsdmaam lntlrqdqfd eeafrsallr qrerlqsgqv
      121 avvdavtvqi tdmsaqerae fadrleeqlr rgapqradrs gg
//
LOCUS       WP_235224745             506 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein
            [Octadecabacter dasysiphoniae].
ACCESSION   WP_235224745
VERSION     WP_235224745.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..506
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=54254
     Region          58..>309
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
ORIGIN      
        1 mkpipqmate drvkdailii scgiaqaaal avaafatrda faaihtgtpl esatifelav
       61 sglvaaaclf lsrrraealg qsyanslrkv lylqiarlpk lrheerrvga lslrfvgdls
      121 aarlwfgrgl pevltalvvl psaiailfal dpdlartglv plgiavsimg imswhlerrh
      181 rqlrqrrasi aismieriai apeldlmgrt dkelraldsr saalrhsavq rrgrtaglqa
      241 ilqagvamsg lsllwfangh avapatvaas lsvlalvalp lgslasawdq ycawrvarek
      301 aqnllnerpl srrssssrep vsvdvtglqg ghpvafraaa gsvaklegpa aavvarcisg
      361 ldlladvevs fdgsattrpr iahigsehvg lqgslrrsvt mmcrtrpsda kienvlgdfg
      421 ladllrhpkw ldqrvfaggk glsemqtlrv dfaravlgkv dlivissirw kadpdqqgll
      481 ttlrrltpat viladaytkt qhteal
//
LOCUS       WP_235224757             300 aa            linear   BCT 02-MAR-2025
DEFINITION  ROK family protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235224757
VERSION     WP_235224757.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..300
                     /product="ROK family protein"
                     /calculated_mol_wt=30738
     Region          3..291
                     /region_name="ASKHA_NBD_ROK_NAGK"
                     /note="nucleotide-binding domain (NBD) of
                     N-acetyl-D-glucosamine kinase (NAGK) and similar proteins;
                     cd24057"
                     /db_xref="CDD:466907"
ORIGIN      
        1 mtaigidlgg tkmeaqvfdd awnviarerr dtpcdypdlv rdvanligwa etqggksapv
       61 gigaaglinp qtglaltanl aatdqpfpad iadaagrait yvndcralal seavfgqgkg
      121 hrivmalilg tgvggglavd gailqgptlt ggefghtsap ahlvaqhdlp iwqcgcgrtg
      181 cietyiagpg larlakqmtg qdvtppqiat rrggdmaqvw qlwcdltadl lhsmtltadp
      241 dvivlggglt hidgiiddlt aaaqraqigd fgvpplvlaq ggdtsgarga ayaawqaend
//
LOCUS       WP_235224772             329 aa            linear   BCT 02-MAR-2025
DEFINITION  Rieske 2Fe-2S domain-containing protein [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235224772
VERSION     WP_235224772.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 329)
  AUTHORS   Botelho,H.M., Leal,S.S., Veith,A., Prosinecki,V., Bauer,C.,
            Frohlich,R., Kletzin,A. and Gomes,C.M.
  TITLE     Role of a novel disulfide bridge within the all-beta fold of
            soluble Rieske proteins
  JOURNAL   J Biol Inorg Chem 15 (2), 271-281 (2010)
   PUBMED   19862563
REFERENCE   2  (residues 1 to 329)
  AUTHORS   Iwata,S., Saynovits,M., Link,T.A. and Michel,H.
  TITLE     Structure of a water soluble fragment of the 'Rieske' iron-sulfur
            protein of the bovine heart mitochondrial cytochrome bc1 complex
            determined by MAD phasing at 1.5 A resolution
  JOURNAL   Structure 4 (5), 567-579 (1996)
   PUBMED   8736555
REFERENCE   3  (residues 1 to 329)
  AUTHORS   Brandt,U., Yu,L., Yu,C.A. and Trumpower,B.L.
  TITLE     The mitochondrial targeting presequence of the Rieske iron-sulfur
            protein is processed in a single step after insertion into the
            cytochrome bc1 complex in mammals and retained as a subunit in the
            complex
  JOURNAL   J Biol Chem 268 (12), 8387-8390 (1993)
   PUBMED   8386158
REFERENCE   4  (residues 1 to 329)
  AUTHORS   Huang,J.T., Struck,F., Matzinger,D.F. and Levings,C.S. 3rd.
  TITLE     Functional analysis in yeast of cDNA coding for the mitochondrial
            Rieske iron-sulfur protein of higher plants
  JOURNAL   Proc Natl Acad Sci U S A 88 (23), 10716-10720 (1991)
   PUBMED   1961737
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012575.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00355.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..329
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /GO_function="GO:0051537 - 2 iron, 2 sulfur cluster
                     binding [Evidence IEA]"
                     /calculated_mol_wt=36364
     Region          5..>233
                     /region_name="PobA"
                     /note="Chlorophyllide a oxygenase/letal leaf spot protein
                     [Coenzyme transport and metabolism]; COG5749"
                     /db_xref="CDD:444459"
ORIGIN      
        1 mntskdawha valsrevrtk pvrilhegep vvlfrgksgi aalvdrcphr rvelskgrvv
       61 qgdiecpyhg wrfggdgqcs aipghlgdvp ryrvkryqal eqdgaifisn gtpdappyvh
      121 cmigqkialr hvhsssastl idaaenildv ahthfthkgl lrgfsakryn vdvtitggkd
      181 wveacytged rqdglisrll dgertktigr frspgivele ywgpkemtia tafhlntadv
      241 etvngvgwim apdhgvitwa ksllfkpmmh falaqdqrvl ksaqnnarfa pdskiingpl
      301 dflrtdmeli lagerptaad aprhhtiel
//
LOCUS       WP_235224841             263 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Octadecabacter dasysiphoniae].
ACCESSION   WP_235224841
VERSION     WP_235224841.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 263)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..263
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=29444
     Region          4..234
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Site            order(9,11,49,79..80,152,191)
                     /site_type="active"
                     /db_xref="CDD:277317"
     Site            order(9,11,49,79,152,191)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277317"
ORIGIN      
        1 mtkliwmsdp hytqegrvlg hdprarldaa idhinthhsd asmclitgdm vnrgthedya
       61 glrkkldtls mpycpmagnh dnrtlfkqsf elpetcmqdf iqytirtpqg livcldthkt
      121 gsdagefcqn rsawltktlr dagttpvflf lhhppialgl pmqdtenmen gqafvdlisg
      181 ftcvkyvfmg hvhrpitgti dhipfatmrs vlyqappprp ewtwktftps aeapcigviq
      241 ivnssvimqy dqfcpyetgv lsg
//
LOCUS       WP_235225039             263 aa            linear   BCT 02-MAR-2025
DEFINITION  SseB family protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235225039
VERSION     WP_235225039.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 263)
  AUTHORS   Ruiz-Albert,J., Mundy,R., Yu,X.J., Beuzon,C.R. and Holden,D.W.
  TITLE     SseA is a chaperone for the SseB and SseD translocon components of
            the Salmonella pathogenicity-island-2-encoded type III secretion
            system
  JOURNAL   Microbiology (Reading) 149 (Pt 5), 1103-1111 (2003)
   PUBMED   12724372
REFERENCE   2  (residues 1 to 263)
  AUTHORS   Hama,H., Kayahara,T., Ogawa,W., Tsuda,M. and Tsuchiya,T.
  TITLE     Enhancement of serine-sensitivity by a gene encoding rhodanese-like
            protein in Escherichia coli
  JOURNAL   J Biochem 115 (6), 1135-1140 (1994)
   PUBMED   7982894
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018837.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07179.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..263
                     /product="SseB family protein"
                     /calculated_mol_wt=27802
ORIGIN      
        1 mtetteidla haamvadead dlarlrfyer laeselfmll egeaegdqis pamfeaedqq
       61 fvlifdrear msdfygkaia pyaalsgrgm aqmlegqrig malnmgvaps amlvpaeavd
      121 wlaqtlgsdp eevegqitel tppkglpevl lealdrklat aaglaveayl cgvtyegggr
      181 ghmlafvgtv egaegaltaa vnealvfsgi dagmldvahl eggdpvserv akvglrfdlp
      241 tpqmpqtpga npgmdpdkpp klh
//
LOCUS       WP_235225078             411 aa            linear   BCT 02-MAR-2025
DEFINITION  polysaccharide biosynthesis/export family protein [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235225078
VERSION     WP_235225078.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 411)
  AUTHORS   Stevenson,G., Andrianopoulos,K., Hobbs,M. and Reeves,P.R.
  TITLE     Organization of the Escherichia coli K-12 gene cluster responsible
            for production of the extracellular polysaccharide colanic acid
  JOURNAL   J Bacteriol 178 (16), 4885-4893 (1996)
   PUBMED   8759852
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014606.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02563.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..411
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0015774 - polysaccharide transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44551
     Region          44..407
                     /region_name="PRK15078"
                     /note="polysaccharide export protein Wza; Provisional"
                     /db_xref="CDD:237903"
ORIGIN      
        1 mstsslntan satsytprql paafgatagv gaglrglgtl pdnpvqpelr ptsltlrppp
       61 avdrgpyvvg igdvlvlatp agggsveelt gllaaqnrrq gytvqddgai tipdvgrvqv
      121 ggktlseaed sifdrliesq idpsfsveia efnsqrvsig gavrtpsvip vrlgplylne
      181 altaaggide ldpefasiri yrdgsiyqip ladfnrdgdl qrlelvsgds vfvdtefrid
      241 raqayfeqqi rvlelrrser tvalselele ieirraqlee errnfqsrle igavdrdyvy
      301 ltgevnqptr yampferqst ladalfeagg iaaqtgnpsq iyvlragrst eavtawhldg
      361 snvvnmvlat rfelrpndvv fvaeqpvtrw nrlvqqlvps liisgvnaaa n
//
LOCUS       WP_235225113             290 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235225113
VERSION     WP_235225113.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..290
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=32031
     Region          12..94
                     /region_name="QdoI"
                     /note="Cupin domain protein related to quercetin
                     dioxygenase [General function prediction only]; COG1917"
                     /db_xref="CDD:441521"
     Region          203..280
                     /region_name="HTH_18"
                     /note="Helix-turn-helix domain; pfam12833"
                     /db_xref="CDD:432818"
ORIGIN      
        1 mnimtlsand tfaaeeafvl sraeldtrrp phlhtqdfhe lvwvqngtvr lhtdagkrdl
       61 segdvlfisp dqrhglqgrr pkgaqadgea sivvslairp gvikaignrh edlagvafwa
      121 atteptithr dmrqlaalnq aalqlerspr rklyleafll pflvaldrtp egmengapdw
      181 liaactkahd pavfrdgaag fvaatgrahp hvsrtmrrfm gltpsdyint lrmdhaarql
      241 tgtsdplpei aadcglpnls hfhklflshm getplryrra rqanliqprl
//
LOCUS       WP_235224539             516 aa            linear   BCT 02-MAR-2025
DEFINITION  protein O-mannosyl-transferase family [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235224539
VERSION     WP_235224539.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 516)
  AUTHORS   Larsen,I.S.B., Povolo,L., Zhou,L., Tian,W., Mygind,K.J., Hintze,J.,
            Jiang,C., Hartill,V., Prescott,K., Johnson,C.A., Mullegama,S.V.,
            McConkie-Rosell,A., McDonald,M., Hansen,L., Vakhrushev,S.Y.,
            Schjoldager,K.T., Clausen,H., Worzfeld,T., Joshi,H.J. and Halim,A.
  TITLE     The SHDRA syndrome-associated gene TMEM260 encodes a
            protein-specific O-mannosyltransferase
  JOURNAL   Proc Natl Acad Sci U S A 120 (21), e2302584120 (2023)
   PUBMED   37186866
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022481.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11028.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..516
                     /product="protein O-mannosyl-transferase family"
                     /calculated_mol_wt=56042
     Region          46..194
                     /region_name="DUF2723"
                     /note="Protein of unknown function (DUF2723); pfam11028"
                     /db_xref="CDD:463208"
ORIGIN      
        1 mqisvfsptr vhlrtaliaa svlifwlvfy gyclfpglgg mlnagdsakf qtlghtsilv
       61 hgpgyplila lgalvrtlel pwepwqvmtf vmasvpgaia nmmafvivar ltrsavfgva
      121 aamllgsagl mavqsteaev yplalafils vgflllrfie tkspaffiaa cgvyalsfgn
      181 hlmmimlvpv flvitglhlr illrprivlp vvllimagas qylylawvth spstayseyl
      241 plpptaaelv nyiagtyfgd lygaglgstq tteillntle fahyrmsapi iiagflafam
      301 gwrrrdakwn glalilgmgl aftpfmlwyg aydirafhlp vlgplligal aavgwwlshw
      361 prlrlgigvv lvgvgvvrai emggylsare pifpdlietl evvvaqspvd dpvvsmtygl
      421 rmatlyhell gevpkpaayr vtwrteaeia krdpvggivi ptdgeqllqw iehrhpdlic
      481 rtlpveqpag tlwpayaflc eegagagtag qrdsen
//
LOCUS       WP_235225115             772 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235225115
VERSION     WP_235225115.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 772)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..772
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=82067
     Region          12..479
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     Site            order(162..166,174,189,191..192,238..241,244,247..248,
                     262..264,298,388,390,416,454)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143429"
     Site            order(166,262,295,298)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143429"
     Region          502..>740
                     /region_name="AdhE"
                     /note="Acyl-CoA reductase or other NAD-dependent aldehyde
                     dehydrogenase [Lipid transport and metabolism]; COG1012"
                     /db_xref="CDD:440636"
ORIGIN      
        1 mtvkdifesm dygpapesas ealgwladrg giaghfingq wgplrddfas nnpatgekla
       61 gvtkgtadev alavaaarka qpkwakdgqa rarvlyaiar lmqknarlla vmetldngkp
      121 iresrdidvp lairhfyhha gfaqlmetem pnaeslgvcg qiipwnfpll mlawkiapal
      181 amgntvvlkp aeytslsamv fceictaagv ppgvvnivtg dgetgaalvd advdkiaftg
      241 stavgriire qtagsgkals lelggkspyi vfddadldsa veglvdaiwf nqgqvccags
      301 rllvqegiad rfyaklksrm dglrigdpmd kcidvgaivd pvqlaeitrm vdtntsgety
      361 qcaapdgcfy pptlitglap adtlmqeeif gpvlvattfr tpteaveian ntryglaasv
      421 wteninlald iapkliagiv wvnatnlmda aagfggvres gfgreggweg lmgytrpkgk
      481 makltaptaf tttdgtpadp ldrtaklyig gkqarpdggy sdpvfnksgk llghasianr
      541 kdlrnaieam aaakgwsktt ghlraqilyy igenlsarsd efatrinqlt gtktgtkevg
      601 dainclftwa awadkhdgaa kgvpirgval amhepvgnia vltddtrplm glieplapal
      661 amgnritava sqpfplaatd fyqvletsdl pagvaniltg shadlaphma ahanidavws
      721 fstadvshvi eakstsnlkr twvnhgtart wpssiwraqs tevktiwipy ge
//
LOCUS       WP_235225116             223 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1523 family protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235225116
VERSION     WP_235225116.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019150.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07509.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..223
                     /product="DUF1523 family protein"
                     /calculated_mol_wt=25996
     Region          1..183
                     /region_name="DUF1523"
                     /note="Protein of unknown function (DUF1523); pfam07509"
                     /db_xref="CDD:429503"
ORIGIN      
        1 mrnirrflri alfliiglfl hyvmpqqdia rvtsteiirt dfsnfnrlfy aqadsgaven
       61 ptrdlrlint erkatylfgl irgnnetmvy rnedtgwiyp pyfkfdssdl qaeasasist
      121 aaeewvvith ygwrvrwasi ypnavairpa psedfrpfpw vnliifiami vggfflramw
      181 lqfrertvdp ladrvgdrvd hvnadlaerk grisrwlgtw rrk
//
LOCUS       WP_235225118             453 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6638 family protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235225118
VERSION     WP_235225118.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042723.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20343.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..453
                     /product="DUF6638 family protein"
                     /calculated_mol_wt=50242
     Region          10..452
                     /region_name="DUF6638"
                     /note="Family of unknown function (DUF6638); pfam20343"
                     /db_xref="CDD:466493"
ORIGIN      
        1 mkrliekglm fgnlipvvsp ilverynral krltgkqtel sdfhidisgy spevgdelgd
       61 dlylnhhgvn rqfilltteq ktapllnakf stsrgilrqf iatneaqlfa ltardavage
      121 lvnsvyaldt parlfdighv tieadttdga vasaaklggm iddfmvkdga whddvlianm
      181 islakdtgdi trnpvnlnrm tfdqdnfwta hlggvyvfrn vkepaaiamg dlavlgdlpi
      241 drvvgadqrs aiaqflkvnd laepiiearg idsaailrqk mdfivadvat slgedmggat
      301 rrdlrslgrr yydklpiawr glsdlvrwae dggawprids ehpayfytlr akdhkdadmv
      361 nmllselspm dvrqlfichk eafytayndw pdakkayvad flsneyqvdk agtrealfgf
      421 edameeptgp wgkgtarndl idrvgpwgav krr
//
LOCUS       WP_235225131             670 aa            linear   BCT 02-MAR-2025
DEFINITION  YfbK domain-containing protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235225131
VERSION     WP_235225131.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023459.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12034.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..670
                     /product="YfbK domain-containing protein"
                     /calculated_mol_wt=71129
     Region          73..>231
                     /region_name="PRK13335"
                     /note="superantigen-like protein SSL3; Reviewed"
                     /db_xref="CDD:139494"
     Region          218..536
                     /region_name="YfbK"
                     /note="Secreted protein containing bacterial Ig-like
                     domain and vWFA domain [General function prediction only];
                     COG2304"
                     /db_xref="CDD:441879"
     Region          494..668
                     /region_name="DUF3520"
                     /note="Domain of unknown function (DUF3520); pfam12034"
                     /db_xref="CDD:432277"
ORIGIN      
        1 mndfdlddlk salnnatpap dpkakadnia latknfansq aalqgsrqhp rptsssniwt
       61 gtmnmlnhlt sragltvtta ivacgfmvvt pqgrdllnld pttakiatpe vatteafspd
      121 vvaaettapa artedapvvi lreavpqada tvsvegittp llsqtdqape yndriiiepf
      181 avpaprqpqa qgqiapndna adaelmpmpn tetfandapn plkitsdepv stfsidvdta
      241 ayslirssit agqlpppdav rieeminyfp yaypapdgda pfqptvnvfe tpwnadtqlv
      301 higiqgemps tddrpplnlv flidtsgsme saeklpllrq sfrlmldnlr pedevaivty
      361 adstsvaldp taasnradil aalnalsagg stngqggiea ayalaetmkd dgdvsrvila
      421 tdgdfnvgls dprglesyie dkrdsgtyls vlgfgrgnlq datmqslaqn gngtaayidt
      481 lseaqkvlvd nltgalfpia ndvkiqvefn patiaeyrli gyetralare dfnndavdag
      541 elgaghtvta ifevtpvgsp aqlsdplryq aaettatsde lgflrlryka pgsdtsqlie
      601 tpfttgtpnt ealfaasiaa fgqllrddty lngysfddai alananrgdd pfgyrtqavq
      661 lmrlagslsn
//
LOCUS       WP_235225147             155 aa            linear   BCT 02-MAR-2025
DEFINITION  Hsp20 family protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235225147
VERSION     WP_235225147.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 155)
  AUTHORS   Maaroufi,H. and Tanguay,R.M.
  TITLE     Analysis and phylogeny of small heat shock proteins from marine
            viruses and their cyanobacteria host
  JOURNAL   PLoS One 8 (11), e81207 (2013)
   PUBMED   24265841
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 155)
  AUTHORS   Kim,K.K., Kim,R. and Kim,S.H.
  TITLE     Crystal structure of a small heat-shock protein
  JOURNAL   Nature 394 (6693), 595-599 (1998)
   PUBMED   9707123
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012241.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00011.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..155
                     /product="Hsp20 family protein"
                     /calculated_mol_wt=17268
     Region          1..138
                     /region_name="alpha-crystallin domain (ACD) found in
                     alpha-crystallin-type small heat shock proteins, and a
                     similar domain found in p23 (a cochaperone for Hsp90) and
                     in other p23-like proteins."
                     /note="The alpha-crystallin-Hsps_p23-like superfamily
                     includes the alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small heat shock proteins (sHsps)
                     and a similar domain found in p23-like proteins. sHsps are
                     small stress induced proteins with monomeric...; cl00175"
                     /db_xref="CDD:469641"
     Site            order(39..43,52,54,56..57,99,117..118)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:107227"
ORIGIN      
        1 mrtlnlaplh ratvgfdqit dmmdrilsnd agqqsyppyn iektaddgwr isiavagfae
       61 ddlhveiken alhvtakkae deaertylhr giatrafsrr fhladhvkvt gathehgmlh
      121 ielvrevpea lkprrieiak sapkaadvie aekvn
//
LOCUS       WP_235225331             926 aa            linear   BCT 02-MAR-2025
DEFINITION  conjugal transfer protein TraG N-terminal domain-containing protein
            [Vibrio sp. ER1A].
ACCESSION   WP_235225331
VERSION     WP_235225331.1
KEYWORDS    RefSeq.
SOURCE      Vibrio sp. ER1A
  ORGANISM  Vibrio sp. ER1A
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 926)
  AUTHORS   Frost,L.S., Ippen-Ihler,K. and Skurray,R.A.
  TITLE     Analysis of the sequence and gene products of the transfer region
            of the F sex factor
  JOURNAL   Microbiol Rev 58 (2), 162-210 (1994)
   PUBMED   7915817
REFERENCE   2  (residues 1 to 926)
  AUTHORS   Firth,N. and Skurray,R.
  TITLE     Characterization of the F plasmid bifunctional conjugation gene,
            traG
  JOURNAL   Mol Gen Genet 232 (1), 145-153 (1992)
   PUBMED   1348105
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07916.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..926
                     /organism="Vibrio sp. ER1A"
                     /db_xref="taxon:1517681"
     Protein         1..926
                     /product="conjugal transfer protein TraG N-terminal
                     domain-containing protein"
                     /calculated_mol_wt=100566
     Region          2..896
                     /region_name="PRK13735"
                     /note="conjugal transfer mating pair stabilization protein
                     TraG; Provisional"
                     /db_xref="CDD:184287"
ORIGIN      
        1 mfvnskdmat ilsmvalisv pltvmqfigt hspkaiitwc avtvlvptll ikstediqii
       61 dasnplhvtt vgnvpmilaf pahfatlymf gitdsingif htnedeqysk tgmlygatlv
      121 rknltakihn pqlqhlwqqy ltncirqdva innkytyeel fsssdmltfl knhspspvrr
      181 ildpghashy saesgrfptc kealpvitsl fkqeatnqpn ylkrllgadg antakqsalm
      241 mtamdnanha lidvsqnarq tilqamvtns tltglidasd avgadatair lmaaqteiqs
      301 nafmastglw aqkripmlqt villlimcas pivaalamlp nmslkvlsnt lmgylnvasw
      361 pivftfinfi shafgsammk sitnadggvt yynlaelhkt nlemssiagw lmmltpiitp
      421 flvkggasim gsaamqfagm mnsvggqvsk eiatgnislg ntsenvhsyd nthankhdtn
      481 yldnhsmasq qldngsmkhl tgsgnvydtr gsrsttdtni hlgeqrsasl ktaatqsara
      541 tqteqtswqt sasdswnqlq asrqtlasqe nygngysqne qtsdraalde vyrathdyaq
      601 shnmsdsday stllagrmgv sghigggkds ivggslnagi egsantgath tytdgetrtd
      661 sdskstafnh amdrlesask thtagdnhsk aaqseqayqd slsnvashsk qlsaavnreh
      721 aasllyeqsk sdnagfnqdl smgfqkwved npklregmdm srlmasndvy estmrkqlae
      781 kyvgelteke iskkmnaitp dqidsiqgqt mntiadvgat nmdtvtaqgq talrahhqtg
      841 qdlaststpl yddkqrqntv nqvdhdvasr tehvkntgvr rghhveentd ktvanrgdgl
      901 nvlgeelhem kesvkdsaks lknelf
//
LOCUS       WP_235225520             198 aa            linear   BCT 02-MAR-2025
DEFINITION  rod-binding protein [Vibrio sp. ER1A].
ACCESSION   WP_235225520
VERSION     WP_235225520.1
KEYWORDS    RefSeq.
SOURCE      Vibrio sp. ER1A
  ORGANISM  Vibrio sp. ER1A
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021638.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10135.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Vibrio sp. ER1A"
                     /db_xref="taxon:1517681"
     Protein         1..198
                     /product="rod-binding protein"
                     /calculated_mol_wt=21485
     Region          94..>192
                     /region_name="Rod-binding"
                     /note="Rod binding protein; cl01626"
                     /db_xref="CDD:445495"
ORIGIN      
        1 mldsnaltli tqlpsqvpft vkqrceikpg ienvastkad vsvvasslhs pspaqaqtas
       61 fetlmvessq raglatfseq rsvpahmqas qhvanfyldn halarmkhdn sgagllaasq
      121 qfealflqqm ltrmrsasea msdennplsm ksdgmfqgml daqlaqrisr qssfglaemi
      181 fkqlssqvpn rpldkesk
//
LOCUS       WP_235225566              71 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6552 family protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235225566
VERSION     WP_235225566.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042686.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20189.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..71
                     /product="DUF6552 family protein"
                     /calculated_mol_wt=7584
     Region          6..71
                     /region_name="DUF6552"
                     /note="Family of unknown function (DUF6552); pfam20189"
                     /db_xref="CDD:466340"
ORIGIN      
        1 marvdtvkwi atviqligyg ltglnvvpwn iaafvvgiil wfivgvmwkd raimvvhiga
       61 fiaivggylg s
//
LOCUS       WP_235225609             334 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235225609
VERSION     WP_235225609.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 334)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..334
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=36918
     Region          3..331
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(8,10..11,13,32..34,84..86,126..128,153,157,180..183)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(104,128,153,157)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mvkalvtgsa gfigyhlckr llahgfdvig fdamtdyydv rlkerrqanl lqsggfkavn
       61 drlendgvlm dliaaekpdy vihlagqagv rysideprsy vdaniigtfn lleavratpv
      121 khlllastss aygantqmpy tetdkadtqm sfyaatkksn evmahsyahl ydipttmfrf
      181 ftvygpwgrp dmalfkftka vlngdaidvy nhgdmsrdft yvedlvrgih llldavperl
      241 dnvpdgdsls pvaphrivni gngepvqlma fieaiekalg qtavknfmdm qpgdvpatwa
      301 dgallktltg ytpktdvetg vqafvdwyrd yyda
//
LOCUS       WP_235225890             164 aa            linear   BCT 02-MAR-2025
DEFINITION  HNH endonuclease [Escherichia coli].
ACCESSION   WP_235225890
VERSION     WP_235225890.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 164)
  AUTHORS   Krishna,S.S., Majumdar,I. and Grishin,N.V.
  TITLE     Structural classification of zinc fingers: survey and summary
  JOURNAL   Nucleic Acids Res 31 (2), 532-550 (2003)
   PUBMED   12527760
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024784.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13392.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..164
                     /product="HNH endonuclease"
                     /calculated_mol_wt=18325
     Region          32..77
                     /region_name="HNH_3"
                     /note="HNH endonuclease; pfam13392"
                     /db_xref="CDD:433169"
     Region          100..148
                     /region_name="IENR1"
                     /note="Intron encoded nuclease repeat motif; smart00497"
                     /db_xref="CDD:197761"
ORIGIN      
        1 mpykkiingt svkpfkckst gylqikvygk kysahrivak afctgfcdgl vvnhkngqrd
       61 dnraenlewv shsenskhgy kqngripisl gkfsgdhpas kavistdmkt geevyyeaam
      121 davregfdss sisrccnges syhkgrfwrf anekmkarwg draa
//
LOCUS       WP_235225924             218 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar hook capping FlgD N-terminal domain-containing protein
            [Octadecabacter dasysiphoniae].
ACCESSION   WP_235225924
VERSION     WP_235225924.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 218)
  AUTHORS   Luo,M., Niu,S., Yin,Y., Huang,A. and Wang,D.
  TITLE     Cloning, purification, crystallization and preliminary X-ray
            studies of flagellar hook scaffolding protein FlgD from Pseudomonas
            aeruginosa PAO1
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 65 (Pt 8), 795-797
            (2009)
   PUBMED   19652342
REFERENCE   2  (residues 1 to 218)
  AUTHORS   Kuo,W.T., Chin,K.H., Lo,W.T., Wang,A.H. and Chou,S.H.
  TITLE     Crystal structure of the C-terminal domain of a flagellar
            hook-capping protein from Xanthomonas campestris
  JOURNAL   J Mol Biol 381 (1), 189-199 (2008)
   PUBMED   18599076
REFERENCE   3  (residues 1 to 218)
  AUTHORS   Ohnishi,K., Ohto,Y., Aizawa,S., Macnab,R.M. and Iino,T.
  TITLE     FlgD is a scaffolding protein needed for flagellar hook assembly in
            Salmonella typhimurium
  JOURNAL   J Bacteriol 176 (8), 2272-2281 (1994)
   PUBMED   8157595
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015896.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03963.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..218
                     /product="flagellar hook capping FlgD N-terminal
                     domain-containing protein"
                     /calculated_mol_wt=23136
     Region          5..218
                     /region_name="flgD"
                     /note="flagellar basal body rod modification protein;
                     Reviewed; PRK12813"
                     /db_xref="CDD:237214"
ORIGIN      
        1 mdiaatsltn stvtpqtets eavissdfdt flkmltvqme nqdplnptds seyaqqlatf
       61 sgveqqvltn dllnalmvqm nttgmaqmad wvgkearata payfdgspvt lapnpasvad
      121 kvelvvfnaa gdevqrmeip kssdpiewag tdingtpfps giyqfqvess sngevvlsem
      181 sdvyakvqev rsengesili leggiavvas svsalrea
//
LOCUS       WP_235225960             260 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Octadecabacter dasysiphoniae].
ACCESSION   WP_235225960
VERSION     WP_235225960.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 260)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..260
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=28529
     Region          3..233
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Site            order(7,9,37,68..69,173,212)
                     /site_type="active"
                     /db_xref="CDD:277317"
     Site            order(7,9,37,68,173,212)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277317"
ORIGIN      
        1 mfyaigdihg qkaqlerafa lidadggada plyfvgdlvd rgwdsawviq timdgqaagk
       61 pwhcilgnhd lmlhqfvtag nvvhpeilsr kswlhhrlgg crtlasymgg ididhpewis
      121 wdhanehgld paspeliaaf sdaakmavpa dhlnwianlp lyldapdghr fvhagirpnv
      181 amadqtrsdl iwirdgwldy tadldamyvh ghtaldfpqh hgnrinldgg agygrplvpa
      241 vydgtgwftl deagraplrp
//
LOCUS       WP_235225966             174 aa            linear   BCT 02-MAR-2025
DEFINITION  invasion associated locus B family protein [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235225966
VERSION     WP_235225966.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 174)
  AUTHORS   Coleman,S.A. and Minnick,M.F.
  TITLE     Differential expression of the invasion-associated locus B (ialB)
            gene of Bartonella bacilliformis in response to environmental cues
  JOURNAL   Microb Pathog 34 (4), 179-186 (2003)
   PUBMED   12668141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018482.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06776.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..174
                     /product="invasion associated locus B family protein"
                     /calculated_mol_wt=18188
     Region          8..173
                     /region_name="IalB"
                     /note="Invasion associated locus B (IalB) protein;
                     cl02207"
                     /db_xref="CDD:470493"
ORIGIN      
        1 miskithalg alalmttsva aqeassnrva antdwsvfve sdptecwavs apketvnsrd
       61 gqvvsvrrge illfvfyrpn agvqgqvtft ggypfaggst aeldiggtty elftegewaw
      121 patpeddari vaamkrgsaa tvsarsgrgt vtrdtfsllg ftagveeaan rcsg
//
LOCUS       WP_235226010              98 aa            linear   BCT 02-MAR-2025
DEFINITION  I78 family peptidase inhibitor [Octadecabacter dasysiphoniae].
ACCESSION   WP_235226010
VERSION     WP_235226010.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023148.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11720.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..98
                     /product="I78 family peptidase inhibitor"
                     /calculated_mol_wt=10507
     Region          39..97
                     /region_name="Inhibitor_I78"
                     /note="Peptidase inhibitor I78 family; cl46679"
                     /db_xref="CDD:481019"
ORIGIN      
        1 mrklfaiapf vflaacggaf pssdtssdpv lpsiaedtcn anqyaslvgq dvtalervmi
       61 ldqvrvirpg qavtmdfrpe rinfnigqds ritsincs
//
LOCUS       WP_235226098             122 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1636 family protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235226098
VERSION     WP_235226098.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019460.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07845.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..122
                     /product="DUF1636 family protein"
                     /calculated_mol_wt=13129
     Region          1..122
                     /region_name="COG5469"
                     /note="Predicted metal-binding protein [Function unknown]"
                     /db_xref="CDD:444220"
ORIGIN      
        1 mttwiticdt ckrtgwedtg mektdgevla emveaaavda sdvktrrvsc tmgcdracni
       61 tvqssgkiny slgtfeaata daeaiveyag khaasetgqv pyrewpqgvk ghfvsrhqpl
      121 pe
//
LOCUS       WP_235226202             725 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235226202
VERSION     WP_235226202.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 725)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 725)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 725)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 725)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..725
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=78395
     Region          20..685
                     /region_name="type_I_sec_LssB"
                     /note="type I secretion system ATPase, LssB family;
                     TIGR03375"
                     /db_xref="CDD:274550"
ORIGIN      
        1 mrlfkrnqkp eltadaaaal eilqqlvtlf dvrvsraria ecwqaapses pglrvleaaa
       61 tlglravpar ydveisvaqr amfvttaada glinpladgd aatiglgeaw strpaardvh
      121 hawtfvpads edrsadarlk ainpiknlgs grmfwvllaa flsnilglat slfvmvvydr
      181 vlpngatesl yalafgvgaa vlfdtllkss rarildnate tadrkitedi fdqyveaqpt
      241 ktgksvgela svirnfetyr efttsatila fvdlpfvllf ifvisqisgl lwvvpavavp
      301 tvlilvlmvq plvarnskra talaqsrqsm lvemlsgldy lrvtgafgif krrfltqaas
      361 qteaqlkarn ssaivgnvvn vlqqlfqvav ivlgfhlfvt dqvtmggiia avilfgrvmt
      421 plsrlgqtlg ranqafasyk vvrdflaldr ntdtalpaql natravalel anvtlrlsen
      481 applfngisl svkegekvai vgrtgsgkss ilrlmsgllr aetgsvlchg isvsayprad
      541 lhrrvghvfq atwafagtlr enislnqvdv tddaihrslr magltdttgk empldmqiye
      601 qganlsggqr qalslarvfa aspeiyllde pssamdsqle arlvkniqte lsdktivivt
      661 hkakllelcd rvivvdqgqi kgdlpakeyf dltrkkagnw qdvsataapk vtvqpmlnpt
      721 kgptt
//
LOCUS       WP_235226250             261 aa            linear   BCT 02-MAR-2025
DEFINITION  C13 family peptidase [Octadecabacter dasysiphoniae].
ACCESSION   WP_235226250
VERSION     WP_235226250.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 261)
  AUTHORS   Caffrey,C.R., McKerrow,J.H., Salter,J.P. and Sajid,M.
  TITLE     Blood 'n' guts: an update on schistosome digestive peptidases
  JOURNAL   Trends Parasitol 20 (5), 241-248 (2004)
   PUBMED   15105025
REFERENCE   2  (residues 1 to 261)
  AUTHORS   Caffrey,C.R., Mathieu,M.A., Gaffney,A.M., Salter,J.P., Sajid,M.,
            Lucas,K.D., Franklin,C., Bogyo,M. and McKerrow,J.H.
  TITLE     Identification of a cDNA encoding an active asparaginyl
            endopeptidase of Schistosoma mansoni and its expression in Pichia
            pastoris
  JOURNAL   FEBS Lett 466 (2-3), 244-248 (2000)
   PUBMED   10682836
REFERENCE   3  (residues 1 to 261)
  AUTHORS   Chen,J.M., Dando,P.M., Rawlings,N.D., Brown,M.A., Young,N.E.,
            Stevens,R.A., Hewitt,E., Watts,C. and Barrett,A.J.
  TITLE     Cloning, isolation, and characterization of mammalian legumain, an
            asparaginyl endopeptidase
  JOURNAL   J Biol Chem 272 (12), 8090-8098 (1997)
   PUBMED   9065484
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013788.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01650.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..261
                     /product="C13 family peptidase"
                     /GO_function="GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=27762
     Region          <111..>201
                     /region_name="CASc"
                     /note="Caspase, interleukin-1 beta converting enzyme (ICE)
                     homologues; Cysteine-dependent aspartate-directed
                     proteases that mediate programmed cell death (apoptosis).
                     Caspases are synthesized as inactive zymogens and
                     activated by proteolysis of the peptide...; cl00042"
                     /db_xref="CDD:444667"
ORIGIN      
        1 mtrfrlitaa lcgallqacm tvptadqggt dtsastalpq arnfvfswgm fadpvfdrdv
       61 vtfnrtfanv ygapadidaf gftssrlstp dpavmqselv emaaqavdgr dtvvvmltsh
      121 gspdlmavkt qpngpvsavs adtlaeflap landrqilil qacfsgslid elrspnriim
      181 taasadrssf gcnpesdntw firslnraml evgaqggswe qifartralv aadeaangyp
      241 asnpqrfvga nmrstwttsa m
//
LOCUS       WP_235226277             227 aa            linear   BCT 02-MAR-2025
DEFINITION  TerB family tellurite resistance protein [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235226277
VERSION     WP_235226277.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 227)
  AUTHORS   Burian,J., Tu,N., Kl'ucar,L., Guller,L., Lloyd-Jones,G.,
            Stuchlik,S., Fejdi,P., Siekel,P. and Turna,J.
  TITLE     In vivo and in vitro cloning and phenotype characterization of
            tellurite resistance determinant conferred by plasmid pTE53 of a
            clinical isolate of Escherichia coli
  JOURNAL   Folia Microbiol (Praha) 43 (6), 589-599 (1998)
   PUBMED   10069007
REFERENCE   2  (residues 1 to 227)
  AUTHORS   Jobling,M.G. and Ritchie,D.A.
  TITLE     The nucleotide sequence of a plasmid determinant for resistance to
            tellurium anions
  JOURNAL   Gene 66 (2), 245-258 (1988)
   PUBMED   3049247
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05099.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..227
                     /product="TerB family tellurite resistance protein"
                     /calculated_mol_wt=24942
     Region          38..154
                     /region_name="TerB"
                     /note="Tellurite resistance protein TerB; pfam05099"
                     /db_xref="CDD:428302"
     Site            order(52,59,124,131)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:143585"
     Region          161..222
                     /region_name="DjlA"
                     /note="DnaJ domain-containing protein [Posttranslational
                     modification, protein turnover, chaperones]; COG1076"
                     /db_xref="CDD:440694"
ORIGIN      
        1 msiwtritda lssltsgesl sdvfanlrtp persvafaia vialgakmak adgqvtkdev
       61 aafrevftip ageeknagrl fnlarkdvag fedyahkika mygddtaapl cdlmeglfhi
      121 aladghyhpn edaflrrvad ifglgdlrfk rlraqfvpda erdpydvlgv aagapmaevr
      181 kawrqlvrdt hpdqmiargv peeavkmaek rmiainrawe dinekaa
//
LOCUS       WP_235225604             219 aa            linear   BCT 02-MAR-2025
DEFINITION  YjbF family lipoprotein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235225604
VERSION     WP_235225604.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 219)
  AUTHORS   Sathiyamoorthy,K., Mills,E., Franzmann,T.M., Rosenshine,I. and
            Saper,M.A.
  TITLE     The crystal structure of Escherichia coli group 4 capsule protein
            GfcC reveals a domain organization resembling that of Wza
  JOURNAL   Biochemistry 50 (24), 5465-5476 (2011)
   PUBMED   21449614
REFERENCE   2  (residues 1 to 219)
  AUTHORS   Ferrieres,L., Aslam,S.N., Cooper,R.M. and Clarke,D.J.
  TITLE     The yjbEFGH locus in Escherichia coli K-12 is an operon encoding
            proteins involved in exopolysaccharide production
  JOURNAL   Microbiology (Reading) 153 (Pt 4), 1070-1080 (2007)
   PUBMED   17379715
REFERENCE   3  (residues 1 to 219)
  AUTHORS   Peleg,A., Shifrin,Y., Ilan,O., Nadler-Yona,C., Nov,S., Koby,S.,
            Baruch,K., Altuvia,S., Elgrably-Weiss,M., Abe,C.M., Knutton,S.,
            Saper,M.A. and Rosenshine,I.
  TITLE     Identification of an Escherichia coli operon required for formation
            of the O-antigen capsule
  JOURNAL   J Bacteriol 187 (15), 5259-5266 (2005)
   PUBMED   16030220
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022552.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11102.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..219
                     /product="YjbF family lipoprotein"
                     /calculated_mol_wt=23347
     Region          52..219
                     /region_name="YjbF"
                     /note="Group 4 capsule polysaccharide lipoprotein gfcB,
                     YjbF; pfam11102"
                     /db_xref="CDD:431654"
ORIGIN      
        1 mkktlitgll gatlalvaac gplqegnrav sllsgvfgsl sgaddspseg gvamtravie
       61 aqeadllrvs iisrdatail lkvatngskv twasqdglsl afdrgllvas rgfgddlmgt
      121 dissavaslr gggnhlrtld flngldeier rtfqcstvvt gsesltiver tyqttvleet
      181 ctdsnfgfkn tywrdrdgti wqsrqwisvq tgylgyqrl
//
LOCUS       WP_235226323             466 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Octadecabacter dasysiphoniae].
ACCESSION   WP_235226323
VERSION     WP_235226323.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 466)
  AUTHORS   Mande,S.S., Sarfaty,S., Allen,M.D., Perham,R.N. and Hol,W.G.
  TITLE     Protein-protein interactions in the pyruvate dehydrogenase
            multienzyme complex: dihydrolipoamide dehydrogenase complexed with
            the binding domain of dihydrolipoamide acetyltransferase
  JOURNAL   Structure 4 (3), 277-286 (1996)
   PUBMED   8805537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07992.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..466
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=48730
     Region          5..274
                     /region_name="TrxB"
                     /note="Thioredoxin reductase [Posttranslational
                     modification, protein turnover, chaperones]; COG0492"
                     /db_xref="CDD:440258"
     Region          374..427
                     /region_name="GlpA-like_Fer2_BFD-like"
                     /note="bacterioferritin-associated ferredoxin (BFD)-like
                     [2Fe-2S]-binding domain of anaerobic glycerol 3-phosphate
                     dehydrogenase subunit A, hydrogen cyanide synthase subunit
                     B, and similar proteins; cd19946"
                     /db_xref="CDD:381079"
ORIGIN      
        1 mndpfdiivi gagpagisaa leadhhgatv clldeqasag gqiyrnvsqs tsartkvlgp
       61 dyleggkmvr dleqsgvvhr tgvtvwkvgq dgsvayskee taaqikgrhi iiangaterp
      121 tplpgwtkag amtvgaaqil mksagivptd avligsgpll ylvaqqlvsa gappkaviet
      181 qtkkdllgat rhlvpalkgw kqlakglqli aairmagvpr ftaatniaih gedkvdrvsf
      241 dangkshsiq ttsallhqgv vpntqitrsi glkhvynaqq hcfhpvtdaf gqssnsvfsi
      301 agdgagigga kvaalsgkis alnavcqigi iprgicetra apllkkrsse lairpfldaa
      361 yppptdvlrp addtiicrce evtagdirrf aslgckgpnq aksfgrpgmg pcqgrycglt
      421 vtqilahetn qshdavgayr iraplkpitl kelasletpk epetat
//
LOCUS       WP_235226330             297 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235226330
VERSION     WP_235226330.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 297)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..297
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=32881
     Region          1..286
                     /region_name="PRK11013"
                     /note="DNA-binding transcriptional regulator LysR;
                     Provisional"
                     /db_xref="CDD:236819"
ORIGIN      
        1 mrlnhrqlea fralidtgsv teaasrlhvt qpaasrliad lektigyalf lrqrkrllpt
       61 peaialyeev ersfigldti adaakdigsf rrgalhiagl palaldflpr viaqfcddrp
      121 disvslkihs sprvlqcvas qqfdigfaet dvehpsvtsk ilhaapfvai lpkghkllek
      181 svlwpndfeg qnyislgsdy isrrkidaif laynvqrimn iesqlsmavg nlvaagagvs
      241 iidlvtarsl rdygmieirp flpeiefafr vllpshrpls plgetflqia tedlrkf
//
LOCUS       WP_235226359             320 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235226359
VERSION     WP_235226359.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 320)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 320)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 320)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..320
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=34899
     Region          39..281
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(120..121,124,151)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238566"
ORIGIN      
        1 mkhlmsflvt llvmvfpafa qdyplriehk fgttiietpp triasvdfng adnllalgvq
       61 pvairywygd senglwpwaq pllsstpevl rgdlnfeqva asepdvilal wsgitreeyd
      121 qlskiapvva vpdgvgdyal pwdqlaliag eatgksieae klvaelradi aamaarnpew
      181 qgmtaavayy wndtpgvyag ndirplllsn lgfrtpddit qampsgefal tfseeeldii
      241 dadvliwitd gsadqrnkie glalrpvlta fregrevftd diltsafshg sllslpfvle
      301 qleprinaai dgdlaigvpe
//
LOCUS       WP_235226366             836 aa            linear   BCT 02-MAR-2025
DEFINITION  CHAT domain-containing protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235226366
VERSION     WP_235226366.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 836)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Classification of the caspase-hemoglobinase fold: detection of new
            families and implications for the origin of the eukaryotic separins
  JOURNAL   Proteins 46 (4), 355-367 (2002)
   PUBMED   11835511
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12770.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..836
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..836
                     /product="CHAT domain-containing protein"
                     /calculated_mol_wt=90540
     Region          1..>119
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          134..777
                     /region_name="COG4995"
                     /note="Uncharacterized conserved protein, contains CHAT
                     domain [Function unknown]"
                     /db_xref="CDD:444019"
ORIGIN      
        1 masylemakt dqdiaarlfa qgqalwgegk paqalpcfrd avaalppsas dqfvvdvtgs
       61 falalrenge fdaalalypd learclaagl darkigrqwa ialeqkrdfd garllyeksk
      121 pdvdapqvew lkwanaigll dwtegrltda athlaaataa mpddpekaap ylavlgndar
      181 lalhmgnsar ayrlinrmve irqavdaipl psetslfkar aalaalrgdh aqeaailrdg
      241 ldwidqndpd ewmhkldlva hyvaaaqrtr psdevvrylt qmcaaapmel awigslmlsq
      301 illeradldg arhnieraga flvgdgtaqs eaeivatlaa lahfagkpda avflgklalk
      361 ylallihdld ddalrsaiee seklldltta dlrsagrfqe vmvlrnffdr vrryallsrr
      421 pmaealahqp vpfdaaelkm eqqwlawrqd laqmraaqgt apllarmsqv vdgllafett
      481 arhtgqvatl ppplrgrirl sfvpagdice lhvqghdysr veridmtpat fnrtvadlrd
      541 avsdpvawrd paqvlyghli tpiadeldha ecleieasga lgmipigils dgvtclveri
      601 avryvidvap vrvdgaarrg lvqfnafare pnempvlape sddgmmwpit fasgadftrg
      661 ravdllgtkp ayvslathle teparpdlaa lqlgdethly ltdfarddfd mngvrvalva
      721 acssgvddvt lahntslaal vlekgaqcfv gtlwdisssv adafiaqfwq alrddpthdp
      781 vhvlkmlqsg aagkadpvga aqnrtggigs papevapvsw aafavfekcn ppqpad
//
LOCUS       WP_235226404             251 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphate/phosphite/phosphonate ABC transporter substrate-binding
            protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235226404
VERSION     WP_235226404.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 251)
  AUTHORS   Metcalf,W.W. and Wanner,B.L.
  TITLE     Evidence for a fourteen-gene, phnC to phnP locus for phosphonate
            metabolism in Escherichia coli
  JOURNAL   Gene 129 (1), 27-32 (1993)
   PUBMED   8335257
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11461398
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..251
                     /product="phosphate/phosphite/phosphonate ABC transporter
                     substrate-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=27220
     Region          19..242
                     /region_name="PhnD"
                     /note="ABC-type phosphate/phosphonate transport system,
                     periplasmic component [Inorganic ion transport and
                     metabolism]; COG3221"
                     /db_xref="CDD:442454"
ORIGIN      
        1 miaslmmyqr pqlagahdrf walirtelaa tgidapdhls qdadefsvwk spdlvlsqtc
       61 gmpyrlwlhd qvglvgtpdy glkdcppgfy rsalvvratd arteltafkd atfafneafs
      121 qsgfaapyhh tgaigswfqn rvrtgahlls akavaegrad iaaldavtwr nierygdiaq
      181 dlrvldwtvp tpglplitaa rqdagliyga vrraidalsv qdaadlgmrg ivaipkqayl
      241 avpnpprgdq s
//
LOCUS       WP_235226296             622 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Octadecabacter dasysiphoniae].
ACCESSION   WP_235226296
VERSION     WP_235226296.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 622)
  AUTHORS   Zhang,Y.L., Arakawa,E. and Leung,K.Y.
  TITLE     Novel Aeromonas hydrophila PPD134/91 genes involved in O-antigen
            and capsule biosynthesis
  JOURNAL   Infect Immun 70 (5), 2326-2335 (2002)
   PUBMED   11953367
  REMARK    Erratum:[Infect Immun 2002 Jun;70(6):3308]
REFERENCE   2  (residues 1 to 622)
  AUTHORS   Swartley,J.S., Liu,L.J., Miller,Y.K., Martin,L.E., Edupuganti,S.
            and Stephens,D.S.
  TITLE     Characterization of the gene cassette required for biosynthesis of
            the (alpha1-->6)-linked N-acetyl-D-mannosamine-1-phosphate capsule
            of serogroup A Neisseria meningitidis
  JOURNAL   J Bacteriol 180 (6), 1533-1539 (1998)
   PUBMED   9515923
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025025.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13641.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..622
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=68621
     Region          56..135
                     /region_name="T2SSE_N"
                     /note="Type II secretion system (T2SS), protein E,
                     N-terminal domain; pfam05157"
                     /db_xref="CDD:428339"
     Region          230..470
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
     Site            order(237,239,267,321,323)
                     /site_type="active"
                     /db_xref="CDD:133049"
     Region          <382..>606
                     /region_name="nfrB"
                     /note="phage adsorption protein NrfB; PRK11234"
                     /db_xref="CDD:236884"
ORIGIN      
        1 makrlaepfs vadvltpsgt aaarahaald raqrddsalr yrptlidaqh qaglvgtsli
       61 dpethppdpr liaqfgahlc lkhrvlpwrs tagrvtvlaa spehflrvrd altvifgrvh
      121 laivapdnld lalsktchsa lmlnaemrtv daescrnwda gkafrwgtav laailacmii
      181 wptisffilc gwavftliln tllkivaavf hvfpkpakpv panpelvhlp tvtilvplfr
      241 erdiagalvs rlskldyptd rldvclvlea ddgttqdala atqlphwmra irvplgtlqt
      301 kpralnyals fakgsiigvy daedapapdq ihvvvnrfaq tgpdvaclqg rldfynshsn
      361 wlarcftvey atwfriilpg lerlklaipl ggttlffrrd tleklggwda hnvtedadlg
      421 irlarhgyrt eiidtvtqee anarawpwvk qrsrwlkgya itygvhmrnp lklwrdlgaw
      481 rffgvqllfa gtitqfllap llwsfwlmlf gvphpldgvl sqpvaltfaa ifllseivgi
      541 tvsaiavtsa kkpdlikwtp tlhfyfplaa laaykgiiel atkpfywdkt thgifaatga
      601 aepdqpvvna pprplphpva ae
//
LOCUS       WP_235226441              72 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5337 family protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235226441
VERSION     WP_235226441.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036562.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17272.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..72
                     /product="DUF5337 family protein"
                     /calculated_mol_wt=7931
     Region          1..71
                     /region_name="DUF5337"
                     /note="Family of unknown function (DUF5337); pfam17272"
                     /db_xref="CDD:435829"
ORIGIN      
        1 mtkptdedia kqgrtaaivi alagllsifa pqltrltgas prvemlfyli slaafiwslv
       61 vtwklwqktr dk
//
LOCUS       WP_235226525             202 aa            linear   BCT 02-MAR-2025
DEFINITION  autoinducer binding domain-containing protein [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235226525
VERSION     WP_235226525.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03472.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..202
                     /product="autoinducer binding domain-containing protein"
                     /calculated_mol_wt=22223
     Region          19..202
                     /region_name="CsgD"
                     /note="DNA-binding transcriptional regulator, CsgD family
                     [Transcription]; COG2771"
                     /db_xref="CDD:442052"
     Region          <36..125
                     /region_name="Autoind_bind"
                     /note="Autoinducer binding domain; pfam03472"
                     /db_xref="CDD:427319"
ORIGIN      
        1 mtelkssddv qllakngyyi alrvgfafpl eevnalpaaw vdhytthrfm lhdpvirwiy
       61 antgaiawsg idlpdpmrvl dqaqtfglry gvavacfdgn regqrsfgtf arsdrefera
      121 eidalhayvv klhhakappt nltkaeleal kmvkegqrlk qiahtlgvse gavkqrlkna
      181 ktklgaqtsa qaaamvgefg li
//
LOCUS       WP_235226528             137 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6314 family protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235226528
VERSION     WP_235226528.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039724.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19834.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..137
                     /product="DUF6314 family protein"
                     /calculated_mol_wt=15351
     Region          7..135
                     /region_name="DUF6314"
                     /note="Family of unknown function (DUF6314); pfam19834"
                     /db_xref="CDD:437666"
ORIGIN      
        1 mrtladfiga ydvsrvidda haggqsrfeg raviapddag avytetghli vnaqrfqaer
       61 sylwrengpr vdvlfadgra fhdfdpqagg haaehlcged myrggydfse wscwavtwdv
      121 qgprkdyrsv twyvrsd
//
LOCUS       WP_235226536             158 aa            linear   BCT 02-MAR-2025
DEFINITION  Hint domain-containing protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235226536
VERSION     WP_235226536.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13403.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..158
                     /product="Hint domain-containing protein"
                     /calculated_mol_wt=16816
     Region          25..155
                     /region_name="Hint"
                     /note="Hedgehog/Intein domain, found in Hedgehog proteins
                     as well as proteins which contain inteins and undergo
                     protein splicing (e.g. DnaB, RIR1-2, GyrA and Pol). In
                     protein splicing an intervening polypeptide sequence - the
                     intein - is excised from a protein; cl22434"
                     /db_xref="CDD:451395"
ORIGIN      
        1 mhlgktkefl dgtvvampsa tvaglatgtt vmtldgelpv ehlnagdrii trdsgmavlr
       61 dvrsadvrva siqikagslg htrpqddmiv gpdtlvhird wrakalfgad vatvkakrli
      121 dgefvseqda ttmtvyelvf dkqhilyadg levasasv
//
LOCUS       WP_235226638             268 aa            linear   BCT 02-MAR-2025
DEFINITION  SapC family protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235226638
VERSION     WP_235226638.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 268)
  AUTHORS   Thompson,S.A., Shedd,O.L., Ray,K.C., Beins,M.H., Jorgensen,J.P. and
            Blaser,M.J.
  TITLE     Campylobacter fetus surface layer proteins are transported by a
            type I secretion system
  JOURNAL   J Bacteriol 180 (24), 6450-6458 (1998)
   PUBMED   9851986
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07277.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..268
                     /product="SapC family protein"
                     /calculated_mol_wt=28972
     Region          11..219
                     /region_name="SapC"
                     /note="pfam07277"
                     /db_xref="CDD:429378"
ORIGIN      
        1 msardwqkvt rqrhgertwh hvtnftfaag lrhavlttse iarcalafpv vfgadgapva
       61 llrvtaprsi fvsvkgawra avlpeilrly pfhadvqsdk qgevtlwvde asgcvsrdkc
      121 glsfftpegl tqdladiaea farrhrdatk lsacygamea crllaplteg enggeepaay
      181 rrvdaerlaa ltetemltlh rngalglaqa calsmghmdw mqraearisc aepsssktsk
      241 vagflaevgr aqaqdaelft saslqaar
//
LOCUS       WP_235226730             164 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3726 domain-containing protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235226730
VERSION     WP_235226730.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023939.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12525.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..164
                     /product="DUF3726 domain-containing protein"
                     /calculated_mol_wt=17163
     Region          8..>45
                     /region_name="DUF3726"
                     /note="Protein of unknown function (DUF3726); cl46816"
                     /db_xref="CDD:481156"
ORIGIN      
        1 mndpktmssn evetlvfkaa rggglplgya edlatatqyl dlesltrcpc sgarpdaiai
       61 qtaldfvmag dapqtvgada gliqayvaaa qrcwqkrliw natatgavfe kfedsspdms
      121 mkqgrrsvqp dlakhlsema akllvpetda sraagagagl tdnd
//
LOCUS       WP_235226691             368 aa            linear   BCT 02-MAR-2025
DEFINITION  BamA/TamA family outer membrane protein [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235226691
VERSION     WP_235226691.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 368)
  AUTHORS   Heinz,E. and Lithgow,T.
  TITLE     A comprehensive analysis of the Omp85/TpsB protein superfamily
            structural diversity, taxonomic occurrence, and evolution
  JOURNAL   Front Microbiol 5, 370 (2014)
   PUBMED   25101071
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013283.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01103.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..368
                     /product="BamA/TamA family outer membrane protein"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /calculated_mol_wt=38076
     Region          <30..368
                     /region_name="BamA"
                     /note="Outer membrane protein assembly factor BamA [Cell
                     wall/membrane/envelope biogenesis]; COG4775"
                     /db_xref="CDD:443807"
ORIGIN      
        1 maflrttclv cglasagstv maqdggsaal qtgasysslr gglafvglda envlgsgvdl
       61 slgyqagddg daitgliskt fslgdtaigs rtfvrttlea rtsdwesqty smehyaadvt
      121 igaqtigglr ydarlfwqsd slgdlgpnvs plvpadldgs tavgvgigfd ystftatgpm
      181 atgfdvhgsl tvatpagdre wiaaelgaqy ntqlpyglvl avngdvgrie grggddvsiv
      241 drafvgsdap rgftysgigp rdrvaggvnt alggnsymtt svelrtetpn psvtlgafvd
      301 agalwdldvt aggasgiidd efylrssagv avywdtaigi mqlnvakpie qqefdeeeii
      361 slnlnfqf
//
LOCUS       WP_235226768             352 aa            linear   BCT 02-MAR-2025
DEFINITION  Hint domain-containing protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235226768
VERSION     WP_235226768.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13403.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..352
                     /product="Hint domain-containing protein"
                     /calculated_mol_wt=37245
     Region          19..49
                     /region_name="HemolysinCabind"
                     /note="RTX calcium-binding nonapeptide repeat (4 copies);
                     pfam00353"
                     /db_xref="CDD:459777"
     Region          <20..93
                     /region_name="COG2931"
                     /note="Ca2+-binding protein, RTX toxin-related [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:442175"
     Region          156..293
                     /region_name="Hint"
                     /note="Hedgehog/Intein domain, found in Hedgehog proteins
                     as well as proteins which contain inteins and undergo
                     protein splicing (e.g. DnaB, RIR1-2, GyrA and Pol). In
                     protein splicing an intervening polypeptide sequence - the
                     intein - is excised from a protein; cl22434"
                     /db_xref="CDD:451395"
ORIGIN      
        1 maeidgdntn ntltgtngsd tikgfdgnds inggsgndtl yggdgddsit ggggddvivg
       61 grgndtmaag sgspsdtfvi rdgdgndtit dfdpnepdiv dfrmdemnty qdvldrmspf
      121 nggtlitydn gstlflenvr qgdlsatnft fgtgpvclha gtmidtpyga vriehlcagd
      181 lvltadhgpq pvraivhqvl hfstacddgk pimikrgalg qgvpvrativ spqhrivlhd
      241 aarggdvfia akrltsgqgm rqmrgrrrae yhnllfarhe vifangmave slllsaqvla
      301 aapklhdaip qprppmtlar avvkqdprsa grndhlaang ppvsehrmph lq
//
LOCUS       WP_235226753             326 aa            linear   BCT 02-MAR-2025
DEFINITION  alcohol dehydrogenase catalytic domain-containing protein
            [Octadecabacter dasysiphoniae].
ACCESSION   WP_235226753
VERSION     WP_235226753.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 326)
  AUTHORS   Taneja,B. and Mande,S.C.
  TITLE     Conserved structural features and sequence patterns in the GroES
            fold family
  JOURNAL   Protein Eng 12 (10), 815-818 (1999)
   PUBMED   10556240
REFERENCE   2  (residues 1 to 326)
  AUTHORS   Murzin,A.G.
  TITLE     Structural classification of proteins: new superfamilies
  JOURNAL   Curr Opin Struct Biol 6 (3), 386-394 (1996)
   PUBMED   8804825
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08240.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..326
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /calculated_mol_wt=33836
     Region          1..322
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
     Site            order(37..39,42,139,143,167..172,191..192,196,222..223,
                     245..246,269..271)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176178"
ORIGIN      
        1 mkalvydgve tltfrdvpdv vpnagehlik veavgicgsd mhaylghdar rpaplilghe
       61 aagtivggpr dgmrvtvnpl vtcgtctacn agrenlcptr qiismapreg afaqyismpd
      121 rnlvevpdgv smtkaalaep lavswhaarl amqalhpsme rtalvvggga iglaaalalk
      181 amgidsvtia epndtrrafl idtckqtvva aangqfsivv davgyaatrt vasacvapgg
      241 viahvglged tggidvrrvt lqevtfigty tytaqdfrdt aaaifdgslg aldwtetrsl
      301 adgqaafrdi lggvvaapki mlnpwa
//
LOCUS       WP_235226775             191 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1444 family protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235226775
VERSION     WP_235226775.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018936.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07285.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..191
                     /product="DUF1444 family protein"
                     /calculated_mol_wt=21327
     Region          10..186
                     /region_name="DUF1444"
                     /note="Protein of unknown function (DUF1444); cl02011"
                     /db_xref="CDD:470432"
ORIGIN      
        1 msetprdpgd lpldrlfpvl rhasfaqstg dggiipsgdn glyfepyigd milvyaidyp
       61 drvayvtran lrdanvrtsq medaawknfq akrdivefqg ngvsfmavid gfyesslvld
      121 selwvsvaqq meddivmivp ardliivapa sntaevaflr svrtdileng thqlsdlmyi
      181 wrdgrwavfd e
//
LOCUS       WP_235226795             429 aa            linear   BCT 02-MAR-2025
DEFINITION  3-deoxy-D-manno-octulosonic acid transferase [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235226795
VERSION     WP_235226795.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 429)
  AUTHORS   Chung,H.S. and Raetz,C.R.
  TITLE     Interchangeable domains in the Kdo transferases of Escherichia coli
            and Haemophilus influenzae
  JOURNAL   Biochemistry 49 (19), 4126-4137 (2010)
   PUBMED   20394418
REFERENCE   2  (residues 1 to 429)
  AUTHORS   Lobau,S., Mamat,U., Brabetz,W. and Brade,H.
  TITLE     Molecular cloning, sequence analysis, and functional
            characterization of the lipopolysaccharide biosynthetic gene kdtA
            encoding 3-deoxy-alpha-D-manno-octulosonic acid transferase of
            Chlamydia pneumoniae strain TW-183
  JOURNAL   Mol Microbiol 18 (3), 391-399 (1995)
   PUBMED   8748024
REFERENCE   3  (residues 1 to 429)
  AUTHORS   Belunis,C.J. and Raetz,C.R.
  TITLE     Biosynthesis of endotoxins. Purification and catalytic properties
            of 3-deoxy-D-manno-octulosonic acid transferase from Escherichia
            coli
  JOURNAL   J Biol Chem 267 (14), 9988-9997 (1992)
   PUBMED   1577828
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11445568
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..429
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /EC_number="2.4.99.-"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=46654
     Region          6..428
                     /region_name="KdtA"
                     /note="3-deoxy-D-manno-octulosonic-acid transferase [Cell
                     wall/membrane/envelope biogenesis]; COG1519"
                     /db_xref="CDD:441128"
ORIGIN      
        1 milyaflaly rlawvlltpv vliylwhrgr rdpaytphia erfgsygtlp qnpiwihavs
       61 lgetrsavpl ardllaages vvfthftpag rkearrvfgd diaagrvasv wvpldmfwvf
      121 krffracrpk igltmeieiw pamifaaraa dvplfmcnaq ypdrslards sglrlrqrim
      181 tgfagafvks qlqadrfasv gvhnihitge lrfdqpvpaa lldaadafap mlqdrpviti
      241 asavegedqm fidvikavqs advaplvvyv praperfgvv gdlmarsglr varrsdifda
      301 dltartdwpk dvdvllgdsl gemyfylsfa hkvvvgagfv pagahniiep lalckpvvtg
      361 pytftieypf veaeaagvak svpdapalia altgaawttp dqiaefmaah sgasaktlaa
      421 issqlsarv
//
LOCUS       WP_235226837             541 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235226837
VERSION     WP_235226837.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 541)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..541
                     /product="AMP-binding protein"
                     /calculated_mol_wt=58663
     Region          7..541
                     /region_name="PRK08162"
                     /note="acyl-CoA synthetase; Validated"
                     /db_xref="CDD:236169"
ORIGIN      
        1 mgwmrdetgl dktpanyvpl tplshlaraa kvfptrealv ygdmrltyaq yharvsqlas
       61 alvqagvqpg dvvatllpni paqaeahfgv paagavlnti nirldvdtia yifdhgeakv
      121 vicdsqflpv cmqaidlmeg daplvvevpd aqagvpeige qidyetflda gdpafnwimp
      181 qdeweslaln ytsgttgrpk gvvyhhrgay lmtmgtpvtw rmtlhpkflt ivplfhcngw
      241 nhtwmmpmlg gtvvccrdis aaaiydaiad egvthfggap ivlnllvnak dterrdfdht
      301 vevftagapp apatlaaigt lgfnvqqvyg ltetyghvte clwnedwddl pqdeqaaika
      361 rqgvafpqme ditvmsdame qvpmdgatqg eivirgnsvm kgylknpdat akafkggyfh
      421 sedlavqhad gsiqiadrak diiisggeni ssvevesalm ghpdvmlcav vampddkwge
      481 vpcafvelke ghngdeaali aftrerlagf kcpkkvvfge lpktstgkiq kfelrksfks
      541 a
//
LOCUS       WP_235226786             425 aa            linear   BCT 02-MAR-2025
DEFINITION  3-deoxy-D-manno-octulosonic acid transferase [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235226786
VERSION     WP_235226786.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 425)
  AUTHORS   Chung,H.S. and Raetz,C.R.
  TITLE     Interchangeable domains in the Kdo transferases of Escherichia coli
            and Haemophilus influenzae
  JOURNAL   Biochemistry 49 (19), 4126-4137 (2010)
   PUBMED   20394418
REFERENCE   2  (residues 1 to 425)
  AUTHORS   Lobau,S., Mamat,U., Brabetz,W. and Brade,H.
  TITLE     Molecular cloning, sequence analysis, and functional
            characterization of the lipopolysaccharide biosynthetic gene kdtA
            encoding 3-deoxy-alpha-D-manno-octulosonic acid transferase of
            Chlamydia pneumoniae strain TW-183
  JOURNAL   Mol Microbiol 18 (3), 391-399 (1995)
   PUBMED   8748024
REFERENCE   3  (residues 1 to 425)
  AUTHORS   Belunis,C.J. and Raetz,C.R.
  TITLE     Biosynthesis of endotoxins. Purification and catalytic properties
            of 3-deoxy-D-manno-octulosonic acid transferase from Escherichia
            coli
  JOURNAL   J Biol Chem 267 (14), 9988-9997 (1992)
   PUBMED   1577828
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11445568
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..425
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /EC_number="2.4.99.-"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=45935
     Region          10..391
                     /region_name="KdtA"
                     /note="3-deoxy-D-manno-octulosonic-acid transferase [Cell
                     wall/membrane/envelope biogenesis]; COG1519"
                     /db_xref="CDD:441128"
ORIGIN      
        1 mtskpkigpm lrlvlgvgal lqpfarpvlt rrltkgkedp drwreklgqt daqrpdgpli
       61 wmhgvgvgev malrglidal srerpdlnfl vtssarssgd vfaknlpart qhqylpldlp
      121 gpvaafldhw rpdlavwsdq eiwprfavea arrsipqayv aaritdasak aksrfgqayg
      181 dlyrildlrh aqdagtaahl halmgddtpv avtgslkpaa apltfsqndl tafvdirtqr
      241 glwlvasshs adetvalkah kilrqtqpda illiaprdaa rapaiaqtaq dmglptslrs
      301 dtdrpgdsda vyiadsyael gtwyratqia liggtfdate ghnpweavpl haailhgsrt
      361 anfdldfkal hagqackevt daaslatall dpatinlhaa aitvrrtall nvrtiaddlf
      421 allrp
//
LOCUS       WP_235226797             267 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease [Octadecabacter dasysiphoniae].
ACCESSION   WP_235226797
VERSION     WP_235226797.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 267)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01061.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..267
                     /product="ABC transporter permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=28588
     Region          16..267
                     /region_name="ABC2_membrane"
                     /note="ABC-2 type transporter; cl21474"
                     /db_xref="CDD:473876"
ORIGIN      
        1 mgrstdmgvr rfgavnwlgt wtlarrevlr fmnvwsqtim gplvnaglfl liftiaigpg
       61 rgdvmgmpfm vflapgiltm tviqnafant sssiasakvg gnivdtlmpp lsaaellvgy
      121 iagavargmi vavvitlgam lfigmpmtyp iwalgfvllg silmgalgmv aavfankfdq
      181 lsaisnflvt plaflsgtfy siealppflq tlchwnpffy iidgvrfgtl gvsdsspwvg
      241 lgvvliwsaa vlgivwywlk tgyrmka
//
LOCUS       WP_235226841             733 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing
            protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235226841
VERSION     WP_235226841.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 733)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02737.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..733
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..733
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /GO_function="GO:0070403 - NAD+ binding [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=78517
     Region          4..722
                     /region_name="fadJ"
                     /note="fatty acid oxidation complex subunit alpha FadJ;
                     PRK11154"
                     /db_xref="CDD:236864"
ORIGIN      
        1 mtdftmktda dgvaiitwdv vgksmnvlsl egwddldacv dtaladdavk giiitsgkkd
       61 sfaggmdlni iakmkasagd dparglmdgl mkshgilrki eragmdaktn kggkpiaaal
      121 pgtalgigle iplachrifa adnakakigl peimvgifpg mggttrlvrk mgammaspll
      181 legkmnnptk akqagvvdev vpadellaaa kawvlsepki vkpwdekgyk mpggepyhpa
      241 gfmtfvgasa mvnsktqgvy paakamlsai yegamvpfdt alkiearwft nvlmnpssea
      301 mirslfinke alekganrpd vadqtvkkvg vlgagmmgag islvsalagi evvlidreqa
      361 aadkgkdytt aymdkgiark kateekkeav lalinattdl ealkdcdliv eavfedvgvk
      421 aemtkkveai vgddaifatn tstlpitela kasvrpdqfi gihffspvdk malveiirgk
      481 etgnvavaks ldfvrqirkt pivvnderff yanrcilpyv negvrmlqeg vapalienaa
      541 klvgmplgpl qltdetsidl gvkiakatka amgsdyddta delifwmade grlgrktkag
      601 fydydekgkr qglwaglter ytpaaeqpdl tdvqhrllfs qvleavrale edvlmdireg
      661 dvgailgwgf apwsggpfsw ldilgapyaa arcdeltkth gerfacpall remadkgqsf
      721 ygrfgtgqds kaa
//
LOCUS       WP_235226885             302 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235226885
VERSION     WP_235226885.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 302)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..302
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=33855
     Region          7..276
                     /region_name="PRK11013"
                     /note="DNA-binding transcriptional regulator LysR;
                     Provisional"
                     /db_xref="CDD:236819"
ORIGIN      
        1 mtnrprlrql ealksvadhg tmtraahsle isqpavsrll adlsdelgfa lldrkdgrlv
       61 ptqearyilp diarvlemmk nitdtsqnln artaghlrva clpgfatshl pdvvtdflte
      121 rrdvtltlep drperilewi igeqydcgit dsfgghpaid sntldirtvc ifptghpfea
      181 ldsvgpehld gqrfihtrrd ssfyqdladv frkaavtphs fvetrqftaa celvmrglgv
      241 svvseldart yqdrlryrpf tpnvphqisi vrpihkipsk itldfmetfe rslsdlivgp
      301 dt
//
LOCUS       WP_235226893             165 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235226893
VERSION     WP_235226893.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 165)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07883.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..165
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=17765
     Region          <56..126
                     /region_name="QdoI"
                     /note="Cupin domain protein related to quercetin
                     dioxygenase [General function prediction only]; COG1917"
                     /db_xref="CDD:441521"
ORIGIN      
        1 mawrdtggqd asvpagsaqm ngregdlffa itaavmsgde algcqevsgv qrpwalrvde
       61 vafpvgavah rhthtgsgwr hlvsgslrie aehgaeimhp gmswfepans pvravalqtv
      121 gmtrfvrcmv iptaykgrst fqlcdpedaa lprlqvthrh vdhvl
//
LOCUS       WP_235227011             446 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235227011
VERSION     WP_235227011.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 446)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 446)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 446)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 446)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..446
                     /product="ATP-binding protein"
                     /calculated_mol_wt=48758
     Region          <165..444
                     /region_name="envZ"
                     /note="osmolarity sensor protein; Provisional; PRK09467"
                     /db_xref="CDD:236531"
ORIGIN      
        1 maylmsfkwl kdymprslyg raalililpv itvqlavsiv fiqrhfegvt eqmtrsiale
       61 lqflidevnd apdltaalav vaqvaeplel atvlpaadvp nesskrwldl tggtvdrmlr
      121 anlaqlgpvv lpnnrraelw fetdhgpmmv sfsrgrvsas nphqllvwmv vlgvfmtcis
      181 yiylrnqlrp itrlakaate ygrgrvvtyy psganevraa gtafldmrnr ierqtqtrtm
      241 mlsgvshdlr tpltrlrlgl gmldgddvep lvrdvddmqg lldafldfar gdaegeaeps
      301 dpialaeqil adaarmgqav hagtldrgad edvriamrpm amrravenli gnalrygaea
      361 rfsvfvtpka vvfcveddgp gipadqreda vrpftrldpa rnqdrgtgvg lglaivedia
      421 rahggvlrlg dsadlgglka evvlgr
//
LOCUS       WP_235227023             625 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphatidylglycerol lysyltransferase domain-containing protein
            [Octadecabacter dasysiphoniae].
ACCESSION   WP_235227023
VERSION     WP_235227023.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 625)
  AUTHORS   Ernst,C.M., Slavetinsky,C.J., Kuhn,S., Hauser,J.N., Nega,M.,
            Mishra,N.N., Gekeler,C., Bayer,A.S. and Peschel,A.
  TITLE     Gain-of-Function Mutations in the Phospholipid Flippase MprF Confer
            Specific Daptomycin Resistance
  JOURNAL   mBio 9 (6), e01659-18 (2018)
   PUBMED   30563904
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 625)
  AUTHORS   Maloney,E., Stankowska,D., Zhang,J., Fol,M., Cheng,Q.J., Lun,S.,
            Bishai,W.R., Rajagopalan,M., Chatterjee,D. and Madiraju,M.V.
  TITLE     The two-domain LysX protein of Mycobacterium tuberculosis is
            required for production of lysinylated phosphatidylglycerol and
            resistance to cationic antimicrobial peptides
  JOURNAL   PLoS Pathog 5 (7), e1000534 (2009)
   PUBMED   19649276
REFERENCE   3  (residues 1 to 625)
  AUTHORS   Staubitz,P., Neumann,H., Schneider,T., Wiedemann,I. and Peschel,A.
  TITLE     MprF-mediated biosynthesis of lysylphosphatidylglycerol, an
            important determinant in staphylococcal defensin resistance
  JOURNAL   FEMS Microbiol Lett 231 (1), 67-71 (2004)
   PUBMED   14769468
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021445.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09924.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..625
                     /product="phosphatidylglycerol lysyltransferase
                     domain-containing protein"
                     /calculated_mol_wt=67137
     Region          92..572
                     /region_name="MprF2"
                     /note="Lysylphosphatidylglycerol synthetase MprF,
                     lysyl-tRNA-binding C-terminal domain [Lipid transport and
                     metabolism]; COG2898"
                     /db_xref="CDD:442143"
ORIGIN      
        1 mktqigvapl aewrtffrkg rllqlvplva lgvfgtlfir hiaaldgvav vaaltalapw
       61 qwmcalvfta lsfrtigeyd vlmhrvlntg qpvhaaraag vkaialsqtl gfgaitsalv
      121 rwrclpdlpp ahilklsaav slsflaalaa italvvplsg lmprsgghva igiaaiaala
      181 llarlaqrsg wipiglgrrt iialivataa dtlfaalalw vlwpepvsfh vlfaaylial
      241 gaglvsnapg gvgafdlsll allgatqnad amaailafri iyyalpagia ilgllhsrvp
      301 lpvdqphhpe atllrqhatr fvhvkgtllt lpcwggdavl gdlprgmqva dlrrstdpkt
      361 lykcsarqas qaraagwsvm rcaqdawisp ktwsstgpar rqlrralcaf ersgfsvrev
      421 stsdglcava qdwakshgge rghsmgrycp dyvrhqrvfa afdgdtpvaf vsfhigpvwt
      481 ldlmrhvsdi pkgtmhalvc agikaaqnsd icylslasva apdphapfar tmteyaaglr
      541 rfksafapiw epryicssgr lglllamttl airirwpapl anpnpaqrhh edfsfahrpr
      601 pcepltspig etphdqrpfr tarha
//
LOCUS       WP_235227041             265 aa            linear   BCT 02-MAR-2025
DEFINITION  chromate resistance protein ChrB domain-containing protein
            [Octadecabacter dasysiphoniae].
ACCESSION   WP_235227041
VERSION     WP_235227041.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 265)
  AUTHORS   Branco,R. and Morais,P.V.
  TITLE     Identification and characterization of the transcriptional
            regulator ChrB in the chromate resistance determinant of
            Ochrobactrum tritici 5bvl1
  JOURNAL   PLoS One 8 (11), e77987 (2013)
   PUBMED   24223748
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 265)
  AUTHORS   Juhnke,S., Peitzsch,N., Hubener,N., Grosse,C. and Nies,D.H.
  TITLE     New genes involved in chromate resistance in Ralstonia
            metallidurans strain CH34
  JOURNAL   Arch Microbiol 179 (1), 15-25 (2002)
   PUBMED   12471500
  REMARK    Erratum:[Arch Microbiol. 2004 May;181(5):390]
REFERENCE   3  (residues 1 to 265)
  AUTHORS   Nies,A., Nies,D.H. and Silver,S.
  TITLE     Nucleotide sequence and expression of a plasmid-encoded chromate
            resistance determinant from Alcaligenes eutrophus
  JOURNAL   J Biol Chem 265 (10), 5648-5653 (1990)
   PUBMED   2180932
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021357.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09828.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..265
                     /product="chromate resistance protein ChrB
                     domain-containing protein"
                     /calculated_mol_wt=28956
     Region          5..258
                     /region_name="ChrB1"
                     /note="Chromate resistance protein ChrB1 [Inorganic ion
                     transport and metabolism]; COG4275"
                     /db_xref="CDD:443416"
ORIGIN      
        1 maapneitck qlmrliglpd cpvivdisid pdfakdpfli pgsfrhphtd legliarlng
       61 racvitcqqg iklsqgltsr lrgrgiaaey ltggmygwrd tpntpripfa alpdtnlwvt
      121 rhrpkidria cpwlirrfvd adaeflfvsp eqaagvadcy gatpfdipdv afshhgdlct
      181 fdamldafdl rtvaldrmaq ivraadtgtt dipqaaglla lsvglsrmhr ddhtqldaal
      241 pmydalyrwa rdgvdethas fggtp
//
LOCUS       WP_235227077             439 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5930 domain-containing protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235227077
VERSION     WP_235227077.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039598.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19353.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..439
                     /product="DUF5930 domain-containing protein"
                     /calculated_mol_wt=48387
     Region          1..322
                     /region_name="DUF5930"
                     /note="Family of unknown function (DUF5930); pfam19353"
                     /db_xref="CDD:466052"
     Region          248..434
                     /region_name="NlpD"
                     /note="Murein DD-endopeptidase MepM and murein hydrolase
                     activator NlpD, contains LysM domain [Cell
                     wall/membrane/envelope biogenesis]; COG0739"
                     /db_xref="CDD:440502"
ORIGIN      
        1 mkarlihklh valekrfpek rlflrsdtet rfirlkpetq liawagsalv vswtiiatav
       61 llmdsigagn fraqaqrdqa tyedrlnals verdvranea vaaqqrfssa leqislmqse
      121 llrsedrrre letglevvqt tlrrtmgerr daeeqvavle aaingdgdip tgfaqggdas
      181 gtvdllatal adtaaerdki andaefalsh aadmelelrl lqerndqifr qleeaftvsv
      241 apldnmfraa gmnpddvleq vrrgysgtgg pltplqfstr ggtedpdaar angilgsmdr
      301 lnlyriaaer ipfdmpvrsg frftsgfgmr wgrmhngtdf aaaigtpiya padgvvtfag
      361 wssgygrlvk vqhafgietr yahqnrirve vgqrlsrgdr igdignsgrs tgphlhyeir
      421 vggrpvnpmi yiragqdvf
//
LOCUS       WP_235227220             299 aa            linear   BCT 02-MAR-2025
DEFINITION  plasmid partitioning protein RepB C-terminal domain-containing
            protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235227220
VERSION     WP_235227220.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 299)
  AUTHORS   Li,P.L. and Farrand,S.K.
  TITLE     The replicator of the nopaline-type Ti plasmid pTiC58 is a member
            of the repABC family and is influenced by the TraR-dependent
            quorum-sensing regulatory system
  JOURNAL   J Bacteriol 182 (1), 179-188 (2000)
   PUBMED   10613878
REFERENCE   2  (residues 1 to 299)
  AUTHORS   Suzuki,K., Ohta,N., Hattori,Y., Uraji,M., Kato,A. and Yoshida,K.
  TITLE     Novel structural difference between nopaline- and octopine-type
            trbJ genes: construction of genetic and physical map and sequencing
            of trb/traI and rep gene clusters of a new Ti plasmid pTi-SAKURA
  JOURNAL   Biochim Biophys Acta 1396 (1), 1-7 (1998)
   PUBMED   9524202
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019147.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07506.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..299
                     /product="plasmid partitioning protein RepB C-terminal
                     domain-containing protein"
                     /calculated_mol_wt=33451
     Region          15..>191
                     /region_name="Spo0J"
                     /note="Chromosome segregation protein Spo0J, contains
                     ParB-like nuclease domain [Cell cycle control, cell
                     division, chromosome partitioning]; COG1475"
                     /db_xref="CDD:441084"
     Region          106..288
                     /region_name="RepB"
                     /note="RepB plasmid partitioning protein; pfam07506"
                     /db_xref="CDD:311449"
ORIGIN      
        1 mtttdeekiv aaafeqgllt vpfdqiaply vvtpqkkasi kfkqiaasih eiglvepmvv
       61 ardphspgqf tlldghlrle vlkdegrtda rclvstddea ftynkrinrl atiqehkmil
      121 ralslgvpee rlasalnini rtlkqkrqll dgicdeaael lkdkqvaltg fqilkkmkpl
      181 rqieaaqlmv amnkytinya rsllaatpes lllsvatpkk ikgisreqld lmeresanle
      241 revrlvedsy gadhldlvla rgyisklmsn drvtrylsqh hdgflpafek iteteafas
//
LOCUS       WP_235227232             291 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4231 domain-containing protein [Octadecabacter dasysiphoniae].
ACCESSION   WP_235227232
VERSION     WP_235227232.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025381.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14015.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..291
                     /product="DUF4231 domain-containing protein"
                     /calculated_mol_wt=32967
     Region          11..170
                     /region_name="DUF4231"
                     /note="Protein of unknown function (DUF4231); cl16538"
                     /db_xref="CDD:472963"
     Region          162..284
                     /region_name="SLATT_1"
                     /note="SMODS and SLOG-associating 2TM effector domain 1;
                     pfam18181"
                     /db_xref="CDD:436331"
ORIGIN      
        1 mtapdleysa lydsanngsi kaqsrflrti rleyfllfcv svasatrgms ginplvitll
       61 lvmlaglfif kifkrldqdw yrcralaesv ktsawrfsmr ahpfedtssi eipkanfrnl
      121 lrdilqanrh iaanletsvt eqvtdsmvei relsldqrmd yyvknridnq rtwyskkskt
      181 nksaltfwva ativlyiiaa ialnadqlgl pwatlafdpl ivivtsalgw lqmkrhgelm
      241 asynltahei giirgnsesv kteeglsdfi neaelafsre htqwvarrda t
//
LOCUS       WP_235227257             203 aa            linear   BCT 02-MAR-2025
DEFINITION  autoinducer binding domain-containing protein [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235227257
VERSION     WP_235227257.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03472.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..203
                     /product="autoinducer binding domain-containing protein"
                     /calculated_mol_wt=22198
     Region          2..136
                     /region_name="Autoind_bind"
                     /note="Autoinducer binding domain; pfam03472"
                     /db_xref="CDD:427319"
     Region          <143..203
                     /region_name="CitB"
                     /note="DNA-binding response regulator, NarL/FixJ family,
                     contains REC and HTH domains [Signal transduction
                     mechanisms, Transcription]; COG2197"
                     /db_xref="CDD:441799"
ORIGIN      
        1 msvrsridlq tsrmshlape gffyalhirf alpmlhhqty pkgwtdtyte eayalrdpii
       61 awgfsevgtt rwseieqldp lnilgqakay gmnfglavsi gemssrtias asrsdrefta
      121 peiaafaala ndlhnttepp ttltaaqaea lrcvaegdry aaaaaklnis esafkarlas
      181 arssllartt aeaiqrakdy rli
//
LOCUS       WP_235227288             291 aa            linear   BCT 02-MAR-2025
DEFINITION  SMODS domain-containing nucleotidyltransferase [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235227288
VERSION     WP_235227288.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 291)
  AUTHORS   Burroughs,A.M., Zhang,D., Schaffer,D.E., Iyer,L.M. and Aravind,L.
  TITLE     Comparative genomic analyses reveal a vast, novel network of
            nucleotide-centric systems in biological conflicts, immunity and
            signaling
  JOURNAL   Nucleic Acids Res 43 (22), 10633-10654 (2015)
   PUBMED   26590262
REFERENCE   2  (residues 1 to 291)
  AUTHORS   Davies,B.W., Bogard,R.W., Young,T.S. and Mekalanos,J.J.
  TITLE     Coordinated regulation of accessory genetic elements produces
            cyclic di-nucleotides for V. cholerae virulence
  JOURNAL   Cell 149 (2), 358-370 (2012)
   PUBMED   22500802
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037736.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18144.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..291
                     /product="SMODS domain-containing nucleotidyltransferase"
                     /calculated_mol_wt=32875
     Region          1..165
                     /region_name="SMODS"
                     /note="Second Messenger Oligonucleotide or Dinucleotide
                     Synthetase domain; cl39525"
                     /db_xref="CDD:477034"
ORIGIN      
        1 mtvqsrfktf isnialtsiq ktagaerrdk vvqalnehyw gsssktahsk yvgswgkftr
       61 vrpprdvdvl ftlpisvynr felrtgnkqs qllqevktvl tntftttaik gsgpvvevpf
      121 tsynvevvpa feldtgrywv cmtadggsya vadyeaeaev irdsnaltkd ntrnlirmik
      181 rwqahcnvpi ksfwieliav eflrnwehrd ksmvyydwmv rdffahlvsk eygtlfapgt
      241 yeamylgglw tskaktaynn avsacedekd ypysaggswq kifgadiplg g
//
LOCUS       WP_235227323             581 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF637 domain-containing protein, partial [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235227323
VERSION     WP_235227323.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04830.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         <1..581
                     /product="DUF637 domain-containing protein"
     Region          <14..85
                     /region_name="DUF637"
                     /note="Possible hemagglutinin (DUF637); pfam04830"
                     /db_xref="CDD:428148"
ORIGIN      
        1 dggqftiasf segaldaait sglssavygt dfgagfvtdi tastvglala dvqtgigdwa
       61 nqyggegsag hialhalagc vaaeaqsadc aagaagaiaq avyagslggq epspagydtp
      121 eayqaayeaw svrtqahvel lgafagyals ggeaanvsva ssiaesglqn nylnhterak
      181 aetllaelst lcggsigpgp ntcdtprade lrveltelqf ssvtntlnll dacgadansq
      241 tcqshleqaq eytdwasglt nrsraerfnv saaatgtdld wggnldtlal dvfaqvqdgt
      301 ldqdaahaei idraisydgr mnltvglgsi vigvggcala gggtacmlva ggsaaltesn
      361 tiydgavtvi tgtetdgyiq nafevagysp edarqyerwv emglavatfs ietgaivlts
      421 ksgqvlrtid davpppatnr lpdfqqgtvn gqytainpgp lddglagtfs ggrytevvld
      481 qdiilnragt rdtplgqfft qsapdsvist ridsavlpew pggstspldt afevripagt
      541 kvyvgevssq ggfyvggtqq ivvpkpwlid gvevigstpl q
//
LOCUS       WP_235227395              22 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1133 family protein, partial [Escherichia coli].
ACCESSION   WP_235227395
VERSION     WP_235227395.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06576.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..22
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>22
                     /product="DUF1133 family protein"
ORIGIN      
        1 miyptntgks gehlrlttle sv
//
LOCUS       WP_235227416              78 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235227416
VERSION     WP_235227416.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025189.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13817.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..78
                     /product="transposase domain-containing protein"
     Region          <1..57
                     /region_name="transpos_IS66"
                     /note="IS66 family transposase; NF033517"
                     /db_xref="CDD:468053"
ORIGIN      
        1 niaenalrgv avgrknwlfa gsdsggehaa vlysligtcr lnnvepekwl ryviehiqdw
       61 panrvrdllp wkvdlssq
//
LOCUS       WP_235227418             187 aa            linear   BCT 02-MAR-2025
DEFINITION  polymorphic toxin type 34 domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_235227418
VERSION     WP_235227418.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 187)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026944.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15606.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..187
                     /product="polymorphic toxin type 34 domain-containing
                     protein"
     Region          <1..57
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
     Region          108..182
                     /region_name="Ntox34"
                     /note="Bacterial toxin 34; pfam15606"
                     /db_xref="CDD:292240"
ORIGIN      
        1 lpgqqydees glyynrhryy dplrgryitq dpiglkggwn fyqyplnpvt ntdplglevf
       61 prpfplpipw pkspaqqqad dnaakaltkw wndtasqrif dslilnnpgl alditmiasr
      121 gnvadtgitd rvndiindrf wsdgkktdrc dvlqelidcg disakdakst qkawncrhsr
      181 qsndkkr
//
LOCUS       WP_235227423             261 aa            linear   BCT 02-MAR-2025
DEFINITION  autotransporter domain-containing protein, partial [Escherichia
            coli].
ACCESSION   WP_235227423
VERSION     WP_235227423.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 261)
  AUTHORS   Oomen,C.J., van Ulsen,P., van Gelder,P., Feijen,M., Tommassen,J.
            and Gros,P.
  TITLE     Structure of the translocator domain of a bacterial autotransporter
  JOURNAL   EMBO J 23 (6), 1257-1266 (2004)
   PUBMED   15014442
REFERENCE   2  (residues 1 to 261)
  AUTHORS   Veiga,E., Sugawara,E., Nikaido,H., de Lorenzo,V. and Fernandez,L.A.
  TITLE     Export of autotransported proteins proceeds through an oligomeric
            ring shaped by C-terminal domains
  JOURNAL   EMBO J 21 (9), 2122-2131 (2002)
   PUBMED   11980709
REFERENCE   3  (residues 1 to 261)
  AUTHORS   Henderson,I.R., Navarro-Garcia,F. and Nataro,J.P.
  TITLE     The great escape: structure and function of the autotransporter
            proteins
  JOURNAL   Trends Microbiol 6 (9), 370-378 (1998)
   PUBMED   9778731
REFERENCE   4  (residues 1 to 261)
  AUTHORS   Pohlner,J., Halter,R., Beyreuther,K. and Meyer,T.F.
  TITLE     Gene structure and extracellular secretion of Neisseria gonorrhoeae
            IgA protease
  JOURNAL   Nature 325 (6103), 458-462 (1987)
   PUBMED   3027577
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015737.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03797.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..261
                     /product="autotransporter domain-containing protein"
     Region          <1..261
                     /region_name="auto_Ag43"
                     /note="Ag43/Cah family autotransporter adhesin; NF033177"
                     /db_xref="CDD:467980"
ORIGIN      
        1 egdlmrteva gmsvtagvyg aaghssvdvk dddgsragtv rddagslggy lnlihnasgl
       61 wadivalgtr hsmkastdnn dfrargwgwl gsletglpfs itdnlmlepq lqynwqglsm
      121 ddgkdnagyv kfghgsaqhv ragfrlgshn dmtfgegtss raplrdsakh svselpvnww
      181 vqpsvirtfs srgdmrvgts tagsgmtfsp sqngtsldlq aglearvren itlgvqagya
      241 hsvsgssaeg yngqatlnvt f
//
LOCUS       WP_235227447             102 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA-packaging protein FI, partial [Escherichia coli].
ACCESSION   WP_235227447
VERSION     WP_235227447.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 102)
  AUTHORS   Smith,M.P. and Feiss,M.
  TITLE     Sites and gene products involved in lambdoid phage DNA packaging
  JOURNAL   J Bacteriol 175 (8), 2393-2399 (1993)
   PUBMED   8468297
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025366.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14000.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     gene            <1..102
                     /gene="gpFI"
     Protein         <1..102
                     /product="DNA-packaging protein FI"
     Region          1..99
                     /region_name="Packaging_FI"
                     /note="DNA packaging protein FI; pfam14000"
                     /db_xref="CDD:290707"
ORIGIN      
        1 disgsaaeia qrvaeweeem qssgddvqvm nmdirerena ahdvreetsg altrirvltc
       61 lhlcgvdget gesveladvg rvilimssda kthvdggmav ya
//
LOCUS       WP_235227486             131 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail sheath subtilisin-like domain-containing protein,
            partial [Escherichia coli].
ACCESSION   WP_235227486
VERSION     WP_235227486.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 131)
  AUTHORS   Xue,Q. and Egan,J.B.
  TITLE     Tail sheath and tail tube genes of the temperate coliphage 186
  JOURNAL   Virology 212 (1), 218-221 (1995)
   PUBMED   7676633
REFERENCE   2  (residues 1 to 131)
  AUTHORS   Temple,L.M., Forsburg,S.L., Calendar,R. and Christie,G.E.
  TITLE     Nucleotide sequence of the genes encoding the major tail sheath and
            tail tube proteins of bacteriophage P2
  JOURNAL   Virology 181 (1), 353-358 (1991)
   PUBMED   1825255
REFERENCE   3  (residues 1 to 131)
  AUTHORS   Arisaka,F., Ishimoto,L., Kassavetis,G., Kumazaki,T. and Ishii,S.
  TITLE     Nucleotide sequence of the tail tube structural gene of
            bacteriophage T4
  JOURNAL   J Virol 62 (3), 882-886 (1988)
   PUBMED   2963141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04984.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>131
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
     Region          <2..>131
                     /region_name="Phage_sheath_1"
                     /note="Phage tail sheath protein subtilisin-like domain;
                     cl01389"
                     /db_xref="CDD:470182"
ORIGIN      
        1 yallvaeqde sigdrprila apeldteavt kslcviagkl rafvyaschg cdtmadaity
       61 rqkfnerevm llwpdfiayn pksgknetfp apayacglra yidheqgwhk slsnvpvknv
      121 lgmsrhvfws l
//
LOCUS       WP_235227502             115 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: replication/maintenance protein RepL, partial
            [Enterobacteriaceae].
ACCESSION   WP_235227502
VERSION     WP_235227502.1
KEYWORDS    RefSeq.
SOURCE      Enterobacteriaceae (enterobacteria)
  ORGANISM  Enterobacteriaceae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales.
REFERENCE   1  (residues 1 to 115)
  AUTHORS   Hefford,M.A., Kobayashi,Y., Allard,S.E., Forster,R.J. and
            Teather,R.M.
  TITLE     Sequence analysis and characterization of pOM1, a small cryptic
            plasmid from Butyrivibrio fibrisolvens, and its use in construction
            of a new family of cloning vectors for Butyrivibrios
  JOURNAL   Appl Environ Microbiol 63 (5), 1701-1711 (1997)
   PUBMED   9143105
REFERENCE   2  (residues 1 to 115)
  AUTHORS   Lampson,B.C. and Parisi,J.T.
  TITLE     Nucleotide sequence of the constitutive
            macrolide-lincosamide-streptogramin B resistance plasmid pNE131
            from Staphylococcus epidermidis and homologies with Staphylococcus
            aureus plasmids pE194 and pSN2
  JOURNAL   J Bacteriol 167 (3), 888-892 (1986)
   PUBMED   3091582
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017542.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05732.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Enterobacteriaceae"
                     /db_xref="taxon:543"
     Protein         1..>115
                     /product="replication/maintenance protein RepL"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /GO_process="GO:0006276 - plasmid maintenance [Evidence
                     IEA]"
     Site            order(38..40,54..56,72..75,77..78,81..82,84..85,91..93,
                     98..100)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238042"
     Region          <43..>115
                     /region_name="HTH_ARSR"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; cl46857"
                     /db_xref="CDD:481197"
ORIGIN      
        1 mdnsqigtpe sheqdnynfv qvsraylkew raltrkspia seilmylien mgrttnavvc
       61 syttlmeitg vsrasvarav kilkedrwmq avkignatay cvnakafwqa grnqk
//
LOCUS       WP_235227316             456 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3179 domain-containing (seleno)protein [Octadecabacter
            dasysiphoniae].
ACCESSION   WP_235227316
VERSION     WP_235227316.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter dasysiphoniae
  ORGANISM  Octadecabacter dasysiphoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 456)
  AUTHORS   Zhang,Y. and Gladyshev,V.N.
  TITLE     High content of proteins containing 21st and 22nd amino acids,
            selenocysteine and pyrrolysine, in a symbiotic deltaproteobacterium
            of gutless worm Olavius algarvensis
  JOURNAL   Nucleic Acids Res 35 (15), 4952-4963 (2007)
   PUBMED   17626042
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022818.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11376.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Octadecabacter dasysiphoniae"
                     /db_xref="taxon:2909341"
     Protein         1..456
                     /product="DUF3179 domain-containing (seleno)protein"
                     /calculated_mol_wt=50091
     Region          194..447
                     /region_name="DUF3179"
                     /note="Protein of unknown function (DUF3179); pfam11376"
                     /db_xref="CDD:431852"
ORIGIN      
        1 msssprpiia avftlimavc asasaaqtad lpdyvidefg appaipdgal sddlqtaidr
       61 lvrisldqns wdigdtgdla titdakdprv awlladmlrf twrpefsnal mktstdllgi
      121 nrldvfhpse lidymiawdm paypgyldsk raiytnyleg wdeifvegdi dwhlvawggv
      181 nidarpydtt ddvcncipaa dnpevstaqd atwldddaiv fgitingesr ayprrimevr
      241 emvndtlggr dlgipyctlc gaaqayftde lpdgverpil rtsgllirsn kvmydltsgs
      301 vfdtflgrav tgllydigfe leqatvittd wgtwkeahpd ttvlveslal grdfdfrngr
      361 dangpifpvg dvdprlpvqe diigvttgsg tpvafqrsaa mialrndqei ifedvrleid
      421 aggiravgld gadvgshqaf wfawsqfhpd telwmp
//
LOCUS       WP_235227509             102 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail tip fiber protein, partial [Escherichia coli].
ACCESSION   WP_235227509
VERSION     WP_235227509.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020885.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09327.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>102
                     /product="phage tail tip fiber protein"
     Region          <1..>42
                     /region_name="COG4733"
                     /note="Phage-related protein, tail protein J [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443767"
     Region          63..>102
                     /region_name="DUF1983"
                     /note="Domain of unknown function (DUF1983); pfam09327"
                     /db_xref="CDD:430529"
ORIGIN      
        1 asgyldffkg eigkthlaqe lwtqidngql apdlaeirts itdvsneitq tvnkkledqs
       61 aaiqqiqkvq vdtnnnlnsm wavklqqmkd grlyiagiga gi
//
LOCUS       WP_235227529             232 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235227529
VERSION     WP_235227529.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 232)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 232)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..232
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=26090
     Region          49..232
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaae rithdypept gakkdkkist vsdyfrnirt hsvhprvsvg ydfgswriaa
       61 dyaryrkwnn skysvnikrv kenngsgkkl tqdlktenqe ngtfhavssl glsavydfdt
      121 gsrfkpyagv rvsyghvrhs idstkkttdv itvppttsdg apttynanpq tqnpyhqsds
      181 irrvglgvia gvgfditpnl tldtgyryhn wgrlentrfk theaslgmry rf
//
LOCUS       WP_235227419              96 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA-packaging protein FI, partial [Escherichia coli].
ACCESSION   WP_235227419
VERSION     WP_235227419.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 96)
  AUTHORS   Smith,M.P. and Feiss,M.
  TITLE     Sites and gene products involved in lambdoid phage DNA packaging
  JOURNAL   J Bacteriol 175 (8), 2393-2399 (1993)
   PUBMED   8468297
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025366.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14000.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     gene            <1..96
                     /gene="gpFI"
     Protein         <1..96
                     /product="DNA-packaging protein FI"
     Region          <1..93
                     /region_name="Packaging_FI"
                     /note="DNA packaging protein FI; pfam14000"
                     /db_xref="CDD:290707"
ORIGIN      
        1 eleeelddtd daagqdtsvs penaltghen evvsaqtdtv tdtaalvtvv alvtlhtdal
       61 hatrdepvaf vlpgtafrvs agvaaemter glarmq
//
LOCUS       WP_235227542            1381 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein [Neisseria gonorrhoeae].
ACCESSION   WP_235227542
VERSION     WP_235227542.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 1381)
  AUTHORS   Wang,J., Hofnung,M. and Charbit,A.
  TITLE     The C-terminal portion of the tail fiber protein of bacteriophage
            lambda is responsible for binding to LamB, its receptor at the
            surface of Escherichia coli K-12
  JOURNAL   J Bacteriol 182 (2), 508-512 (2000)
   PUBMED   10629200
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024939.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13550.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1381
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..1381
                     /product="phage tail protein"
                     /calculated_mol_wt=150534
     Region          <177..1096
                     /region_name="COG4733"
                     /note="Phage-related protein, tail protein J [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443767"
     Region          222..405
                     /region_name="Phage-tail_3"
                     /note="Putative phage tail protein; pfam13550"
                     /db_xref="CDD:433300"
     Region          1054..1173
                     /region_name="DUF3672"
                     /note="Fibronectin type III protein; pfam12421"
                     /db_xref="CDD:289206"
ORIGIN      
        1 mggksstvts aeerilslqv qrssqgltlp viygrtrvag nlvwygdfvt iehkavtrqg
       61 gkggggvkqv gisytyeaav mlalcegeiq gvgrvwrdke kfdspaqlrl tlmrggdeqp
      121 lwthlqqakh qgqalnysgt aylcspnyel tksaqiyqhn fevigksgys gnipdanpre
      181 ivldlltnqr ygcgfpsqni gdtdrysnyc ravgiflspa yteqgeaqrn iselleqtns
      241 aavfsqgrlk iipygdgshs gngavyvadn kaaydltddd fivsgaqdpv kagrktnada
      301 fnqiqveyld rdndynvaia eakdqanieq yglrpkdavk mhgicdakva qkvaqqllqr
      361 alyvrneyef klgwkyclle pmdivtltda glglnktpvr iteieedgeg vlsvkaedcp
      421 agvytvseyp tqpssgysad ynvspgnahv pvifeaplql tggepqiwla tagggmwgga
      481 evwvsadgds ytrvgavnrk arfgaltadl pdgavfdrtn tlgveisagq ltggteqdsr
      541 dlltlcyvdg eflayadael kgvgrytlgn ltrgaygsav nahaagsrfa ridealfkya
      601 vprnwigrtv wvklvsynvf gggiqdlaev paysytiega plgqiqnlrl tsswaygkea
      661 viawdkldga dtydveiyag gsrrrlravd givdnsytyt qadmkadggq vrgivfkvrg
      721 ravtgktgnw aqiaaqnpql qalqgisids glrqafftcq kpdeedfagi ivwvcenaac
      781 paedankayd gaetfitiak cggkplekgk tyylraagyd sfgkdnlkis gsisftvydv
      841 satdlsessl nkalrdkinl idgngagsvn erveavrsta dgnaaavqth arsingleaq
      901 ytvkvdangk vagfglattp kngtpeskfi vnadrfgiga agkadvfpfv vdtqknrvgi
      961 ngelvvngka vvdklnagdi hggkiaadtl danrlkagsv tareigaaav tadkiganav
     1021 tadkiqvadl savssnlgsi tggslniggg nftvssdgil tadnavirgr ieadsgyfng
     1081 tvrassvegd vlrahrlrwt egnvwvldld kdplprvlip nfyvvsetfg nnrvqaklll
     1141 nggvlaprev retenytnyi wrgrtfgrye dlpprarggg dytqqsgsry rtrleyqiqv
     1201 ipagkpvslk lslashesvf spfvsvsyla qsdyeykqll grmvwrtfae sfrydskkqi
     1261 ylggdrrvhd yqnqmykhwn ayggllqlpd diygisfeyr pftnadwstm lafdrsdkfv
     1321 vvkkyrghap qqyslfqeef ntavpksnll ffvehwwqyi elrnirvlip esrenevwqv
     1381 g
//
LOCUS       WP_235227561             281 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235227561
VERSION     WP_235227561.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 281)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 281)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..281
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=31233
     Region          94..281
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mhtadkkllf ssllfssllf ssllfssllf ssaaqaaged hgrgpyvqad layayehith
       61 dypeptgakk gkistvsdyf rnirthsvhp rvsvgydfgg wriaadyary rkwnnnkysv
      121 dikelgrndk tssgkknhln iktqktehqe ngtfhavssl glstiydfdt gsrfkpyigm
      181 rvayghvrhq vrsveqetta vttypsnggt psvateastk kpahhesrsi sslgfgavag
      241 vgiditpnlt ldagyryhnw grlentrfkt heaslgmryr f
//
LOCUS       WP_235227567             131 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-hairpin-helix domain-containing protein [Neisseria
            gonorrhoeae].
ACCESSION   WP_235227567
VERSION     WP_235227567.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 131)
  AUTHORS   Witte,G., Hartung,S., Buttner,K. and Hopfner,K.P.
  TITLE     Structural biochemistry of a bacterial checkpoint protein reveals
            diadenylate cyclase activity regulated by DNA recombination
            intermediates
  JOURNAL   Mol Cell 30 (2), 167-178 (2008)
   PUBMED   18439896
REFERENCE   2  (residues 1 to 131)
  AUTHORS   Doherty,A.J., Serpell,L.C. and Ponting,C.P.
  TITLE     The helix-hairpin-helix DNA-binding motif: a structural basis for
            non-sequence-specific recognition of DNA
  JOURNAL   Nucleic Acids Res 24 (13), 2488-2497 (1996)
   PUBMED   8692686
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12836.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..131
                     /product="helix-hairpin-helix domain-containing protein"
                     /calculated_mol_wt=13682
     Region          15..113
                     /region_name="comE"
                     /note="comEA protein; TIGR01259"
                     /db_xref="CDD:213597"
ORIGIN      
        1 msrggatlyr fllirhivar cgllfatlkg ktmkkmfvlf cmlfscafsl aavninaasq
       61 qelealpgig pakakaiaey raqngafksv ddlikvkgig pavlaklkdq asvgapapkg
      121 pakpvlpavk k
//
LOCUS       WP_235227605             403 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease subunit S [Neisseria gonorrhoeae].
ACCESSION   WP_235227605
VERSION     WP_235227605.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 403)
  AUTHORS   Janscak,P. and Bickle,T.A.
  TITLE     The DNA recognition subunit of the type IB restriction-modification
            enzyme EcoAI tolerates circular permutions of its polypeptide chain
  JOURNAL   J Mol Biol 284 (4), 937-948 (1998)
   PUBMED   9837717
REFERENCE   2  (residues 1 to 403)
  AUTHORS   Bickle,T.A. and Kruger,D.H.
  TITLE     Biology of DNA restriction
  JOURNAL   Microbiol Rev 57 (2), 434-450 (1993)
   PUBMED   8336674
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01420.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..403
                     /product="restriction endonuclease subunit S"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=46421
     Region          22..190
                     /region_name="RMtype1_S_MgeORF438P-TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR), similar to S.MgeORF438P TRD1-CR1 and TRD2-CR2,
                     and to Escherichia coli G5 S subunit (S.Eco16445ORF5013P)
                     TRD2-CR2 and Acetobacter pasteuri; cd17291"
                     /db_xref="CDD:341180"
     Site            order(116,119..120,122..123,149,151,157,161,164..165,182,
                     184..185)
                     /site_type="other"
                     /note="TRD-CR/TRD-CR interface [polypeptide binding]"
                     /db_xref="CDD:341180"
     Region          218..382
                     /region_name="Methylase_S"
                     /note="Type I restriction modification DNA specificity
                     domain; pfam01420"
                     /db_xref="CDD:396139"
     Region          <306..400
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
     Site            order(313,316..317,324..325,348,350,356,360,363..364,385,
                     387..388)
                     /site_type="other"
                     /note="TRD-CR/TRD-CR interface [polypeptide binding]"
                     /db_xref="CDD:341170"
ORIGIN      
        1 mdmqskakkl iemiqtapve wkplgevlvr tkgtkitagq mkemhkdnap lkifaggktf
       61 alvdfddvpd kdihrepsii vksrgiiefe yydkpfshkn emwsyhsvnk hiyikyvyyf
      121 lktqenyfrn igskmqmpqi atpdtdnyki pipsletqqk ivkildkfie leatleaela
      181 lrkrqyryyr dllldfdnqi gggiadgyqc rlknvvwktl gevaeysknr icsdklnehn
      241 yvgvdnllqn regkklsgyv psegkmteyi vndilignir pylkkiwqad ctggtngdvl
      301 virvtdekvn pkylyqvlad dkffafnmkh akgakmprgs kaaimqykip ipplpeqeki
      361 vailgkfdtl thsvseglph eialrrkqye yyreqllafp kaa
//
LOCUS       WP_235227625             151 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3310 domain-containing protein [Neisseria gonorrhoeae].
ACCESSION   WP_235227625
VERSION     WP_235227625.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023181.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11753.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..151
                     /product="DUF3310 domain-containing protein"
                     /calculated_mol_wt=17177
     Region          23..73
                     /region_name="DUF3310"
                     /note="Protein of unknwon function (DUF3310); pfam11753"
                     /db_xref="CDD:432050"
ORIGIN      
        1 mtvrntqtet vrteaapqqg gntnpgyykn rafecvgfaq ylnfnlgnaf kyiwrhkekg
       61 gredlekalr ylerqradap kfkklkcrry ekmyaglkdc gfdcgteaal lavisaayyi
      121 rdgednfawa aacvedllek mppeeqrlnn g
//
LOCUS       WP_235227636             158 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6948 domain-containing protein [Neisseria gonorrhoeae].
ACCESSION   WP_235227636
VERSION     WP_235227636.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046222.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22253.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..158
                     /product="DUF6948 domain-containing protein"
                     /calculated_mol_wt=17075
ORIGIN      
        1 meankfevks lsdlikvfag iaadfeaamg vkradistef depqhepqpp vtvaeqkgin
       61 dfaigkevii rtysagvwfg vlkqkagnev iltkarrmys wwakesisls gvgrhgirqd
      121 gsqicgelds vwleaieiip vtggaaesir talevaqs
//
LOCUS       WP_235227458              51 aa            linear   BCT 02-MAR-2025
DEFINITION  TA system toxin CbtA family protein, partial [Escherichia coli].
ACCESSION   WP_235227458
VERSION     WP_235227458.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 51)
  AUTHORS   Tan,Q., Awano,N. and Inouye,M.
  TITLE     YeeV is an Escherichia coli toxin that inhibits cell division by
            targeting the cytoskeleton proteins, FtsZ and MreB
  JOURNAL   Mol Microbiol 79 (1), 109-118 (2011)
   PUBMED   21166897
REFERENCE   2  (residues 1 to 51)
  AUTHORS   Brown,J.M. and Shaw,K.J.
  TITLE     A novel family of Escherichia coli toxin-antitoxin gene pairs
  JOURNAL   J Bacteriol 185 (22), 6600-6608 (2003)
   PUBMED   14594833
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018465.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06755.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..51
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>51
                     /product="TA system toxin CbtA family protein"
     Region          1..>51
                     /region_name="CbtA_toxin"
                     /note="CbtA_toxin of type IV toxin-antitoxin system;
                     pfam06755"
                     /db_xref="CDD:369065"
ORIGIN      
        1 mktlpdthvr easrcpspvt iwqilltrll dqhygltlnd tpfadervie q
//
LOCUS       WP_235227656             390 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Neisseria gonorrhoeae].
ACCESSION   WP_235227656
VERSION     WP_235227656.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..390
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=44156
     Region          2..381
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mnitiaapyc slpsephfnr fwylaellsq shdvllitsn fkhydksfrr pedakaasqg
       61 rlkvmllees gysknvslgr vtshhrfvkh fekwlencrp geqdvvysay pliatnlllg
      121 khkarlgykl ivdvqdvwpe sfssvvpflk kiphnllpfa sranrayrya dalvavsqty
      181 ldrakeanpn vpgeviyiga dfpkldaapa kdfgddktrf fylgtlsysy dvetvckgvr
      241 kllddgenve lhimgggpdl drlkqyacdg ikfygyipya emmsvakgcd iavnaihsya
      301 mqsitnklsd ymalqkpiln sqvndevaev ltllphanyr sgdvdgfvra akdilkrknd
      361 pvqseeivrr frrdisyrki vnlierlade
//
LOCUS       WP_235227670             228 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235227670
VERSION     WP_235227670.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 228)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 228)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..228
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=25777
     Region          48..228
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaye hitrdypdaa gankgkistv sdyfrnirth sihprvsvgy dfgswriaad
       61 yaryrkwnnn kysvnienvq iredngnrid rktenqengt fhavsslgls avydfklndk
      121 fkpyigarva yghvrhsids tkkateflta agqdggaptv ypphkntqdd hresnsirrv
      181 glgviagvgf ditpnltlda gyryhnwgrl entrfkthea slgvryrf
//
LOCUS       WP_235227681             157 aa            linear   BCT 02-MAR-2025
DEFINITION  PilX family type IV pilin [Neisseria gonorrhoeae].
ACCESSION   WP_235227681
VERSION     WP_235227681.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Helaine,S., Dyer,D.H., Nassif,X., Pelicic,V. and Forest,K.T.
  TITLE     3D structure/function analysis of PilX reveals how minor pilins can
            modulate the virulence properties of type IV pili
  JOURNAL   Proc Natl Acad Sci U S A 104 (40), 15888-15893 (2007)
   PUBMED   17893339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022965.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11530.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..157
                     /product="PilX family type IV pilin"
                     /calculated_mol_wt=17384
     Region          1..>35
                     /region_name="PRK10574"
                     /note="putative major pilin subunit; Provisional"
                     /db_xref="CDD:236718"
     Region          31..157
                     /region_name="Pilin_PilX"
                     /note="Minor type IV pilin, PilX; pfam11530"
                     /db_xref="CDD:288394"
ORIGIN      
        1 meqkgftlie mmivvtilgi isviaipsyq syiekgyqsq lytemvginn vlkqfilknp
       61 qddndilksk leifvsgykm npkiakkysv svrfvnegkp rayrlvgvpn agtgytlsvw
      121 mnsvgdgykc rnaasaqtys etlsantgce afsnrkk
//
LOCUS       WP_235227673            1032 aa            linear   BCT 02-MAR-2025
DEFINITION  conjugal transfer protein TraG N-terminal domain-containing protein
            [Neisseria gonorrhoeae].
ACCESSION   WP_235227673
VERSION     WP_235227673.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 1032)
  AUTHORS   Frost,L.S., Ippen-Ihler,K. and Skurray,R.A.
  TITLE     Analysis of the sequence and gene products of the transfer region
            of the F sex factor
  JOURNAL   Microbiol Rev 58 (2), 162-210 (1994)
   PUBMED   7915817
REFERENCE   2  (residues 1 to 1032)
  AUTHORS   Firth,N. and Skurray,R.
  TITLE     Characterization of the F plasmid bifunctional conjugation gene,
            traG
  JOURNAL   Mol Gen Genet 232 (1), 145-153 (1992)
   PUBMED   1348105
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07916.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..1032
                     /product="conjugal transfer protein TraG N-terminal
                     domain-containing protein"
                     /calculated_mol_wt=110844
     Region          5..481
                     /region_name="TraG_N"
                     /note="TraG-like protein, N-terminal region; pfam07916"
                     /db_xref="CDD:429732"
     Region          13..956
                     /region_name="PRK13735"
                     /note="conjugal transfer mating pair stabilization protein
                     TraG; Provisional"
                     /db_xref="CDD:184287"
ORIGIN      
        1 mmaveyftfp gngeavravf ngvatisgst mmggamqaaa lfgflvtlav avfkldlkdn
       61 fsylfvvlfc wmgmmvpktt vlitesggyg ytgrqytvgn vpvglaymgy fvssfgqsit
      121 rkaeqvnhlp ddlnysrtgm lfgtrlmeni rearipdaql tqdwalfmhq csffdmnlyh
      181 fynvqdlaqs adilatltht nqalftnvsq iasrrgnmlq yngksktmtc neaakelkdr
      241 trfysknylp gyiadrvfag lgtnsaginr vnalatlgns sfqylldnar fdtlknieqa
      301 amvevirqag iingqrnrnp aavqqafaqv qarnqyiaaq ktgssmaswn lplirsaaea
      361 iliglfpfvm ilamlggima frllsfymms mlwiqlwapv asiinmimtm nakrlfsvea
      421 angvitpgtg dtllmaaada qaaagaamwl ipviagalam ggrslmngmm gmtssakstg
      481 eaagfqvgsg nysagnmnyn nsnankhsln pvytdpqmmt aqsaagtswr nmatgdsraq
      541 mrnsslgvss qsqisqsesy skaadraets aqqwqasfre svsqgnanrl afatnygmdr
      601 sasegygmgl daaesrklsy vldrgkkigq qfnisnassi asaiaiglga ggsepaseqk
      661 sastrlaqtm iqkgaqgles lsksagtige marnmqsfig dkgklgwkgd atnrdqmvae
      721 igksieagir qgvsfdsnft dkvsqseayk vglnsgnslv rtaeanfska reaahmsaes
      781 yqeaqsyrem aartygngit iaqdntnalv qdnpeltmse lnagqggtyn aairagvnsq
      841 drlkaaaens gwrpndlspe drpqnntqaa ykhfsdkvss gagaafgdvq tqahqagiip
      901 dginaainar genlkqeyan ksgkvegdin qgrnshrqev grlathaqka qdetngvtmr
      961 inthalpwns fgerynnlme dvrkgkgyig sgsdqaaahl gnpalasefd ppipqrpgnt
     1021 kssgsavfrp ke
//
LOCUS       WP_235227739             478 aa            linear   BCT 02-MAR-2025
DEFINITION  MobA/MobL family protein [Neisseria gonorrhoeae].
ACCESSION   WP_235227739
VERSION     WP_235227739.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015354.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03389.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..478
                     /product="MobA/MobL family protein"
                     /calculated_mol_wt=56090
     Region          47..208
                     /region_name="MobA_MobL"
                     /note="MobA/MobL family; pfam03389"
                     /db_xref="CDD:427275"
ORIGIN      
        1 maiyhlnvry cskskgqsaq akndyinrnd kyskrlddlq fsgygnmpkf aednpqefwr
       61 lsdiyerana rvcteiefal preltleqqq klvssfient vdsgsnklpy sfaihtdknn
      121 hnphchlifs erqldgidrt aeqffkrant kspekggamk tadfrdrefi qsvrktwreq
      181 anqaleqygy aaridersyk eqgieqapra ridrvtwqel nrleqeerqi vqelalkgqe
      241 inkeksylqk ieekqaqgmg kyeskfaaaf sklsesalkh dlsnekekds kihtqeekvp
      301 qnriqglsqa dfdqflidew lpqiekyvka qekrdgmeie itqydkdlqr iqgdynkltd
      361 knqgflglwe tkeqkakkke ledeykhtae qrnaksqela eysqkikaye qktlepinek
      421 iakyqadnpe ikmrslgfvk kikaqgayka aqermerekq hqqekqqrhl eresglsl
//
LOCUS       WP_235227795            1021 aa            linear   BCT 02-MAR-2025
DEFINITION  S-layer homology domain-containing protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235227795
VERSION     WP_235227795.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 1021)
  AUTHORS   Mesnage,S., Fontaine,T., Mignot,T., Delepierre,M., Mock,M. and
            Fouet,A.
  TITLE     Bacterial SLH domain proteins are non-covalently anchored to the
            cell surface via a conserved mechanism involving wall
            polysaccharide pyruvylation
  JOURNAL   EMBO J 19 (17), 4473-4484 (2000)
   PUBMED   10970841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012613.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00395.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..1021
                     /product="S-layer homology domain-containing protein"
                     /calculated_mol_wt=108080
     Region          82..404
                     /region_name="NAGPA"
                     /note="Sugar-P-sugar glycosidase (uncovering enzyme, UCE),
                     NAGPA superfamily [Carbohydrate transport and metabolism];
                     COG4632"
                     /db_xref="CDD:443670"
     Region          506..578
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); cl02708"
                     /db_xref="CDD:445894"
     Region          <649..>697
                     /region_name="FlaA"
                     /note="Flagellar filament outer layer protein Flaa;
                     pfam04620"
                     /db_xref="CDD:309664"
     Region          844..884
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          906..952
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          971..1013
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
ORIGIN      
        1 mkncfrktls lllalsllca lslpaaasea lgedltskei tlneetqlst nvfwstsysd
       61 lrqenfityt pnrdvkpivt fggvltqrst vtaaakalea egyrvvagin gdfynvgtgl
      121 pigivvtdgl lrssdagyya vgfkkdgsav mgkpgvkvta slgygvndgf gnyteyvrpv
      181 fgvnkarvst ggiylytydf ndrhttgnte pgidvvcsve ngeiaigetv tlrverviea
      241 aaataiqpdq vvlsvnlksd ayhvdalrgl seggeitlki etsndewedv eyavgtlyal
      301 vengqvisgl qaganprtav gqkadgtlif ytidgrksgh sigasmtqva qrlielgcet
      361 avcldgggst tlsitepdel takainrpse gseravtnqi flvasgeptg rlshfyvnpd
      421 ytyvlagskv nisaaavdtn yipmaksydl tvsdgeldgh vlttpahgge itvtaksgsk
      481 kgtatvyaie tpddvairns sgtiltsltv tpgskttlta taayqhlplk adpeaftwsv
      541 sgdigtvsad giltagapgq gtitvtaggr svsipvtvsr lalktvedfe qartvftdga
      601 gdgvklshvs aadqvrmgrg aarldytlne eadmtaqwtt dsditvspkv yssvnlwvyg
      661 dnsgntlsll ysdgdlgyqa kpvatldftg wkqvsvelgt gfaiqglris apepvvyddg
      721 lgnliqeypd tphsgtlyld qmvasfggav dneapkvtlt vgettlgasv sdlvdgvlpw
      781 savsvtwdgq eqdfsyntst galttslvsd grphrvtita kdasgnigra sydvpvaedy
      841 efsftdtkgy wganyvefly tsgittgyad gtfrpgqnit raqfsvmlyr ylgldeskya
      901 dvvlpfadnn kiadyavpai kalytegvin gttgkdgkly fnpnnsltra qaatmigrtq
      961 ekgyatvelt ftdagkipay aafyiqtmaa qgviggyadg sfkpnnpitr gqmakilynl
     1021 m
//
LOCUS       WP_235227796             106 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6442 family protein [Oscillibacter valericigenes].
ACCESSION   WP_235227796
VERSION     WP_235227796.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039453.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20040.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..106
                     /product="DUF6442 family protein"
                     /calculated_mol_wt=11948
     Region          1..104
                     /region_name="DUF6442"
                     /note="Family of unknown function (DUF6442); pfam20040"
                     /db_xref="CDD:437872"
ORIGIN      
        1 mnkddileks rrenkgpdem eqyvmaaagk iaakvgmlvc civailqvif tdaisfeswm
       61 iyfsilaatf ivkyvklhsk helwvavlyt vlfimfavlf lirlvg
//
LOCUS       WP_235227890             352 aa            linear   BCT 02-MAR-2025
DEFINITION  C47 family peptidase [Oscillibacter valericigenes].
ACCESSION   WP_235227890
VERSION     WP_235227890.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 352)
  AUTHORS   Dubin,G.
  TITLE     Extracellular proteases of Staphylococcus spp
  JOURNAL   Biol Chem 383 (7-8), 1075-1086 (2002)
   PUBMED   12437090
REFERENCE   2  (residues 1 to 352)
  AUTHORS   Dubin,G., Chmiel,D., Mak,P., Rakwalska,M., Rzychon,M. and Dubin,A.
  TITLE     Molecular cloning and biochemical characterisation of proteases
            from Staphylococcus epidermidis
  JOURNAL   Biol Chem 382 (11), 1575-1582 (2001)
   PUBMED   11767947
REFERENCE   3  (residues 1 to 352)
  AUTHORS   Karlsson,A., Saravia-Otten,P., Tegmark,K., Morfeldt,E. and
            Arvidson,S.
  TITLE     Decreased amounts of cell wall-associated protein A and
            fibronectin-binding proteins in Staphylococcus aureus sarA mutants
            due to up-regulation of extracellular proteases
  JOURNAL   Infect Immun 69 (8), 4742-4748 (2001)
   PUBMED   11447146
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017364.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05543.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..352
                     /product="C47 family peptidase"
                     /GO_function="GO:0008234 - cysteine-type peptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=39490
     Region          204..351
                     /region_name="Peptidase_C47"
                     /note="Staphopain peptidase C47; pfam05543"
                     /db_xref="CDD:398922"
ORIGIN      
        1 mllsisanat fmtpkdsddi llriysaecp qeaieyaena ylrhlsayie sgdlsvsntv
       61 slgtpfeips dvsdlpvyyf piisdgkvia tfrvypdyvq stddgdtiya gimslylvge
      121 lnalmedtel sspvflymdn dnvmeridnd vnvlvpspkg eppmgievtp snlnvvaltd
      181 tldsasteel impytiskyl dcniietqgn nqwcyayass miiryctgnn qypkardime
      241 myysvltdds yltqaqvvda gyqfglhpry iartispyae idadrpiflh stdgnplfgh
      301 alvmrgynis snvysiwnpw rnyfesmdis tniyvadsst sfewtktiyg wa
//
LOCUS       WP_235227991             876 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing phosphohydrolase [Oscillibacter
            valericigenes].
ACCESSION   WP_235227991
VERSION     WP_235227991.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 876)
  AUTHORS   Galperin,M.Y. and Chou,S.H.
  TITLE     Sequence Conservation, Domain Architectures, and Phylogenetic
            Distribution of the HD-GYP Type c-di-GMP Phosphodiesterases
  JOURNAL   J Bacteriol 204 (4), e0056121 (2022)
   PUBMED   34928179
REFERENCE   2  (residues 1 to 876)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024878.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13487.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..876
                     /product="HD domain-containing phosphohydrolase"
                     /calculated_mol_wt=99200
     Region          34..221
                     /region_name="HisKA_7TM"
                     /note="N-terminal 7TM region of histidine kinase;
                     pfam16927"
                     /db_xref="CDD:465318"
     Region          231..>637
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
     Region          465..621
                     /region_name="GGDEF"
                     /note="Diguanylate-cyclase (DGC) or GGDEF domain; cd01949"
                     /db_xref="CDD:143635"
     Site            order(500,543)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143635"
     Site            order(505,508..509,513,517,539,541..544)
                     /site_type="active"
                     /db_xref="CDD:143635"
     Site            order(535,563)
                     /site_type="active"
                     /note="I-site [active]"
                     /db_xref="CDD:143635"
     Region          <602..845
                     /region_name="HDGYP"
                     /note="HD-GYP domain, c-di-GMP phosphodiesterase class II
                     (or its inactivated variant) [Signal transduction
                     mechanisms]; COG2206"
                     /db_xref="CDD:441808"
ORIGIN      
        1 mngyswaavi slccylflll pfftaqktkk vlytfmgmla vmilwnggsl fmrmqlwpsv
       61 ylwhhvsllg mmllpvvyyh fildfleekn shgrafwtvf yllmfivncv tgffvplpev
      121 vtiggkaqfi yhyqwhiyll flsvvltflq lafiirrhcm gnqiafrqlv pviwgvvimi
      181 vghglatlpv fagvpldils gvinavflfy alykkrllrm tlllsksnyc alsvilgali
      241 fsrfalrfed llteragldr tftmliiavl lavvivalyf litrtldgif aqteqrqqel
      301 iqnfgedith mlsvaailqg lsdtiqeavh adrifvfird ldgeyrieht tnpleeknfy
      361 vrsdhpllay lknhgscvlq qefsrttvyr smwekeklll rtldiecfvp mmaegdligl
      421 vmlagkkdkk pyqsgdmnfl qslcgicaga vknaytyera legarkdslt nlvnrkfffe
      481 llerefekyk dtalslclln vddfklynql ygtqegnlal qrvagilsas isencyaari
      541 ggkefalilp gydiysakcl aenvaaqige inhysngeta grltvsvgic aapymassak
      601 elfknadmav ytvkrsgkna vlmysaeisr reeqharyks gysehastiy altaavdtkd
      661 hytfqhsqnv ayyaselaka agmdpdlvei vkeagllhdi gkigvredil nktgkltpee
      721 yeimkghven avniirylps ldyviptvls hherydgkgy prrlageeip imgrvlciad
      781 afdaitsvrs ykdavpprea vrilreeagk qfdpglvtvf adlveenkie lqgqrddrpy
      841 ppvmfsadae ergrmseekp deaffenrdr dpeiqd
//
LOCUS       WP_235228003             703 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase family protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235228003
VERSION     WP_235228003.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04851.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..703
                     /product="DEAD/DEAH box helicase family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=79138
     Region          9..206
                     /region_name="PLDc_N_DEXD_a"
                     /note="N-terminal putative catalytic domain of
                     uncharacterized prokaryotic and archeal HKD family
                     nucleases fused to a DEAD/DEAH box helicase domain;
                     cd09179"
                     /db_xref="CDD:197276"
     Site            order(143,145,162,164,177)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197276"
     Site            143
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197276"
     Region          260..673
                     /region_name="dnd_restrict_1"
                     /note="DNA phosphorothioation system restriction enzyme;
                     TIGR04095"
                     /db_xref="CDD:274978"
ORIGIN      
        1 mlhdyeflss ynkldndvaq efyipcmsna frydrisgyf gstiyiiawd alkefvshgg
       61 kmrvicspyl sdedmlaiee grsaandtli sealkketee llnspslskp arllacliaa
      121 giielkiaii tencapdvrk lyhdkagvfs dlagdrvafr gsfnetfkgl ssdgniesad
      181 vfqswdggkd lerlkaiekc fhdiweerys nislyslpse fksliskess gysweellee
      241 iqvkrrsgek wspskkrspi tlkphqvdal erweeqgyhg iyqgctgcgk tiiaisairk
      301 mldmkktvmv lvpakellyh wekeirrvia dmtdlqillc gdgnnawrka stlndwtsps
      361 dtlhkiviai mdtasseeyi gkvyggehlf vvadevhrmg snrrrnffsi asgarfgvsa
      421 tperygdseg thailsyfgd ilkppytlad airdkvltpy fyhpqsvslt vdeqeewdnl
      481 sreiskryai sqgkngssvd nylqmlmitr ariikkakgk ikkaieivek nykdgekwlv
      541 ycedkdqlnk vyteisqlgi dtyvyysdmp gdtnatlsyf atnggvlvsi kcldegvdip
      601 atthalvlas sknprefiqr rgrilrlyen khfstlydvi avpntasvle dkslsivaae
      661 lsraiefgks aenpacitdl qlialhfgin yeefldggve dee
//
LOCUS       WP_235228013             488 aa            linear   BCT 02-MAR-2025
DEFINITION  ArdC-like ssDNA-binding domain-containing protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235228013
VERSION     WP_235228013.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 488)
  AUTHORS   Gonzalez-Montes,L., Del Campo,I., Garcillan-Barcia,M.P., de la
            Cruz,F. and Moncalian,G.
  TITLE     ArdC, a ssDNA-binding protein with a metalloprotease domain,
            overpasses the recipient hsdRMS restriction system broadening
            conjugation host range
  JOURNAL   PLoS Genet 16 (4), e1008750 (2020)
   PUBMED   32348296
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 488)
  AUTHORS   Krishnan,A., Burroughs,A.M., Iyer,L.M. and Aravind,L.
  TITLE     Unexpected Evolution of Lesion-Recognition Modules in Eukaryotic
            NER and Kinetoplast DNA Dynamics Proteins from Bacterial Mobile
            Elements
  JOURNAL   iScience 9, 192-208 (2018)
   PUBMED   30396152
REFERENCE   3  (residues 1 to 488)
  AUTHORS   Iyer,L.M., Burroughs,A.M., Anand,S., de Souza,R.F. and Aravind,L.
  TITLE     Polyvalent Proteins, a Pervasive Theme in the Intergenomic
            Biological Conflicts of Bacteriophages and Conjugative Elements
  JOURNAL   J Bacteriol 199 (15), e00245-17 (2017)
   PUBMED   28559295
  REMARK    Publication Status: Online-Only
REFERENCE   4  (residues 1 to 488)
  AUTHORS   Belogurov,A.A., Delver,E.P., Agafonova,O.V., Belogurova,N.G.,
            Lee,L.Y. and Kado,C.I.
  TITLE     Antirestriction protein Ard (Type C) encoded by IncW plasmid pSa
            has a high similarity to the 'protein transport' domain of TraC1
            primase of promiscuous plasmid RP4
  JOURNAL   J Mol Biol 296 (4), 969-977 (2000)
   PUBMED   10686096
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019997.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08401.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..488
                     /product="ArdC-like ssDNA-binding domain-containing
                     protein"
                     /GO_function="GO:0003697 - single-stranded DNA binding
                     [Evidence IEA]"
                     /calculated_mol_wt=54945
     Region          18..137
                     /region_name="ArdcN"
                     /note="N-terminal domain of anti-restriction factor ArdC;
                     pfam08401"
                     /db_xref="CDD:429975"
     Region          48..272
                     /region_name="ArdC"
                     /note="Antirestriction protein ArdC [Replication,
                     recombination and repair]; COG4227"
                     /db_xref="CDD:443371"
ORIGIN      
        1 msteqktyps qfekvkaitd qleagiqalf esdkfkqylk tlskfhdysl nntiliamqk
       61 pdatlvagyt awqkqfgrqv qkgengiril aptpykkkme vektdpvtge iltnpdgtsv
      121 ketkevlmpa fkvvnvfdvs qtdgkplptl gvneltgdva qyemffealk kacpvpmdfe
      181 qitggakgyf htvenriaiq egmsqvqtvk taihemthqk lhsidptikv dplepkltrn
      241 hkeveaesva ftvcqhygid tgdysfayva gwshgkdtpe lkasldkirk tasemiteid
      301 erlavlqkey awahltaddv kniecidsey mphsrmaeht fsceivgepm tlkltvsqhd
      361 dgegftihse gkdvwdamte selrklepvl tstaelhywt sqvekaetak avkevtfgfm
      421 etenlglsqe qcqkfwevve qketalspps aladlqakke esekeksskp ktktarkkqk
      481 kqkkeesr
//
LOCUS       WP_235228191             156 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4830 domain-containing protein [Oscillibacter valericigenes].
ACCESSION   WP_235228191
VERSION     WP_235228191.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027438.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16112.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..156
                     /product="DUF4830 domain-containing protein"
                     /calculated_mol_wt=17228
     Region          13..>30
                     /region_name="OAD_gamma"
                     /note="Oxaloacetate decarboxylase, gamma chain; pfam04277"
                     /db_xref="CDD:461248"
     Region          54..137
                     /region_name="DUF4830"
                     /note="Domain of unknown function (DUF4830); pfam16112"
                     /db_xref="CDD:435144"
ORIGIN      
        1 mliwttrfsr kkavltviam givmavlill tgrtesgnss arpeladnsq rveylrslgw
       61 evdtepvetl qfllpeklee pylsynelql sqgldltacl gkqverytyt vtnyperpeg
      121 vqanlyiced ypvagdiccp gaggfqtgla fpeena
//
LOCUS       WP_235228274             434 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Oscillibacter valericigenes].
ACCESSION   WP_235228274
VERSION     WP_235228274.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 434)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 434)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 434)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 434)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..434
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=48783
     Region          103..427
                     /region_name="AfuA"
                     /note="ABC-type Fe3+ transport system, periplasmic
                     component [Inorganic ion transport and metabolism];
                     COG1840"
                     /db_xref="CDD:441445"
ORIGIN      
        1 mkkklfalll aavmvlslas cgkkaetpst tpdapateep aaepttdlpl gydpetgaea
       61 ygpyyddwsd mtddelyema lkedtvlniy atsskmlkae epfeemypgl dlvvsdldsd
      121 evlskaqieh etgnvtadvl qtkdvngsvf yewynqgile pfyprdicsh ieegnlkysy
      181 plyasqafwy ynteafpdgq pidswwqiie kdengnqrfh lytkeigqes aylslfasfi
      241 nhademeady krvygkdley tydaskfnfe vpennagvey lwrftqaemt figdgdelvl
      301 avhnstkdep alclasagki enqeesgyni dwcidlkpyn allnteslfv aagtdspaga
      361 rlfiryitgg adgqsgglkp ftkvgnwplr ddvedkknpa klselgarpn didaiyaiyp
      421 dvqdmwtywl nqkk
//
LOCUS       WP_235228323             274 aa            linear   BCT 02-MAR-2025
DEFINITION  putative RNA methyltransferase [Oscillibacter valericigenes].
ACCESSION   WP_235228323
VERSION     WP_235228323.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 274)
  AUTHORS   Das,K., Acton,T., Chiang,Y., Shih,L., Arnold,E. and Montelione,G.T.
  TITLE     Crystal structure of RlmAI: implications for understanding the 23S
            rRNA G745/G748-methylation at the macrolide antibiotic-binding site
  JOURNAL   Proc Natl Acad Sci U S A 101 (12), 4041-4046 (2004)
   PUBMED   14999102
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF045339.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21302.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..274
                     /product="putative RNA methyltransferase"
                     /calculated_mol_wt=30526
     Region          5..274
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(93..99,121..122,142..144,160)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
ORIGIN      
        1 mtslfrcpic ggpltreera yrcpvghsyd iakegytyll ppnqkhsaap gddkgmavar
       61 rdflskgyyv pllntlctei sartgnspal ldtgcgegyy tagifralae agkdprmagt
      121 diskfilrya akrekdvefa vassyhlpva dgsmdillnc fsplaleefr rvlkpggvfl
      181 yvvpaadhlw elkqvlyekp ypneeketpy egfaydaivp vdarihlesq adihalfqmt
      241 pyywktpkag aerlaaldtl dcriafrvhi frkl
//
LOCUS       WP_235228504              91 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6881 domain-containing protein [Oscillibacter valericigenes].
ACCESSION   WP_235228504
VERSION     WP_235228504.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF045463.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21812.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..91
                     /product="DUF6881 domain-containing protein"
                     /calculated_mol_wt=10728
ORIGIN      
        1 mqyymiewdh eeedepwkly leldsrgcpr rkvevfrvgv yqsfddldep ptdprqaags
       61 egnvtalnrv qfddvweqsr qmpdgfmgmf f
//
LOCUS       WP_235228570             288 aa            linear   BCT 02-MAR-2025
DEFINITION  nitroreductase family protein [Oscillibacter valericigenes].
ACCESSION   WP_235228570
VERSION     WP_235228570.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025865.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14512.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..288
                     /product="nitroreductase family protein"
                     /calculated_mol_wt=31633
     Region          7..252
                     /region_name="TM1586_NiRdase"
                     /note="Putative TM nitroreductase; pfam14512"
                     /db_xref="CDD:405236"
ORIGIN      
        1 mnysaliqnr ksvrefadkk vsaaalaeie tyyqkscqrl vpdletklcv fgeeakeale
       61 gaagyesflv gapnylvlls akgdqagena gfmmedmvlk ltdmelgccw itftdsekvk
      121 aalkidspld vaaivafgqg lkttkrlrvn ilsmsnvdia aqrqyfapkh glhdmvfmdt
      181 wgntqgvdey igfyddmlwe alyaatlsps ylnrqpygfi ihegqitlvk apdsytdeid
      241 aklglgivll hfsstasqwa gkikwsfgad aaklqlpegy eavasckl
//
LOCUS       WP_235228592             260 aa            linear   BCT 02-MAR-2025
DEFINITION  T7SS effector LXG polymorphic toxin [Streptococcus mitis].
ACCESSION   WP_235228592
VERSION     WP_235228592.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus mitis
  ORGANISM  Streptococcus mitis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus; Streptococcus mitis group.
REFERENCE   1  (residues 1 to 260)
  AUTHORS   Zhang,D., Iyer,L.M. and Aravind,L.
  TITLE     A novel immunity system for bacterial nucleic acid degrading toxins
            and its recruitment in various eukaryotic and DNA viral systems
  JOURNAL   Nucleic Acids Res 39 (11), 4532-4552 (2011)
   PUBMED   21306995
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016617.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04740.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Streptococcus mitis"
                     /db_xref="taxon:28037"
     Protein         1..260
                     /product="T7SS effector LXG polymorphic toxin"
                     /calculated_mol_wt=29467
     Region          16..189
                     /region_name="LXG"
                     /note="LXG domain of WXG superfamily; pfam04740"
                     /db_xref="CDD:428100"
ORIGIN      
        1 msykikfddi tsvqvesqkt mnaweeaias lnkamsdfin nqnlqgqais smrnylvevh
       61 gtllqtlvnl mndystnlll ykdgyyqidg dlhtklpskv ftnlhsalks srddlkseie
      121 ilnttkdkis dlvsyegssh tstvmnynfl mnqlknldts itqyesnhas qdlvafkell
      181 aatkaliteh agktrtvgty qsgdfaklks vqrfaiaykq atqqmesrve rvqaaqerdr
      241 vrlkpwldqi rvgktwllah
//
LOCUS       WP_235228665              57 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6472 family protein [Oscillibacter valericigenes].
ACCESSION   WP_235228665
VERSION     WP_235228665.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039466.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20076.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..57
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..57
                     /product="DUF6472 family protein"
                     /calculated_mol_wt=6734
     Region          2..57
                     /region_name="DUF6472"
                     /note="Domain of unknown function (DUF6472); pfam20076"
                     /db_xref="CDD:437908"
ORIGIN      
        1 maanceecvh ydyddeaeay yctmdldede merflrsand acpfyrrgdd ymtarrq
//
LOCUS       WP_235228669             379 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme [Oscillibacter
            valericigenes].
ACCESSION   WP_235228669
VERSION     WP_235228669.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..379
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /calculated_mol_wt=40656
     Region          2..372
                     /region_name="am_tr_V_EF2568"
                     /note="cysteine desulfurase family protein; TIGR01977"
                     /db_xref="CDD:131032"
ORIGIN      
        1 miyldnaatt rpkppgvaea mtaammswgn cgrgaheeal asaravfsvr eqmarllgcp
       61 radhvcftpn stqalniais gllgpgdhvi stdlehnsvl rplyrlrqqg aavdfvpadr
      121 rgqidyddfe rllrpdtkav vcthasnltg dmvdigrvge fccahgllfi ldasqtagvf
      181 pidmeqqhid vvcftghksl lgpqgtgglc iregvdirpf avggtgvqsy letqpmeypt
      241 rleagtlnsh glaglgaale flekigidai rahetalahr fyetvrqipg vtvygdhska
      301 erapvvalni gdyesgevad elaerfgiat rpgahcaprm hralgttgqg avrfswsyfn
      361 teeetdaaad avrilated
//
LOCUS       WP_235228697              93 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Streptococcus mitis].
ACCESSION   WP_235228697
VERSION     WP_235228697.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus mitis
  ORGANISM  Streptococcus mitis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus; Streptococcus mitis group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024573.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13175.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Streptococcus mitis"
                     /db_xref="taxon:28037"
     Protein         1..93
                     /product="AAA family ATPase"
                     /calculated_mol_wt=10630
     Region          1..>92
                     /region_name="recF"
                     /note="recombination protein F; Reviewed; PRK00064"
                     /db_xref="CDD:234608"
ORIGIN      
        1 mwlqhlslkt frnyketkid fnpklnvflg rnaqgktnml eailffslkh vvigleqnkn
       61 lihfdeeqlh lsglvqkqtg sipleieltq kgv
//
LOCUS       WP_235228897             177 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5662 family protein [Oscillibacter valericigenes].
ACCESSION   WP_235228897
VERSION     WP_235228897.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039820.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18907.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..177
                     /product="DUF5662 family protein"
                     /calculated_mol_wt=20531
     Region          2..154
                     /region_name="DUF5662"
                     /note="Family of unknown function (DUF5662); pfam18907"
                     /db_xref="CDD:436821"
ORIGIN      
        1 mnflghlktv hhhralvrky cfrlglywqg lthdlskysp veffagvkyf qgdhspndaq
       61 rkafgysasw mhhkgrnrhh fefwtdynpd gsgisgvemp rkyvaemfcd rlaasktyrg
      121 kdfdpgdpyr fflrgkdrrl llhpntaall etilltlkde gedaafdyvr revlgks
//
LOCUS       WP_235228941            3214 aa            linear   BCT 02-MAR-2025
DEFINITION  S-layer homology domain-containing protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235228941
VERSION     WP_235228941.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 3214)
  AUTHORS   Mesnage,S., Fontaine,T., Mignot,T., Delepierre,M., Mock,M. and
            Fouet,A.
  TITLE     Bacterial SLH domain proteins are non-covalently anchored to the
            cell surface via a conserved mechanism involving wall
            polysaccharide pyruvylation
  JOURNAL   EMBO J 19 (17), 4473-4484 (2000)
   PUBMED   10970841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012613.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00395.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3214
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..3214
                     /product="S-layer homology domain-containing protein"
                     /calculated_mol_wt=348223
     Region          2885..2958
                     /region_name="Cadherin-like"
                     /note="Cadherin-like beta sandwich domain; pfam12733"
                     /db_xref="CDD:403821"
     Region          2970..3033
                     /region_name="Flg_new"
                     /note="Listeria-Bacteroides repeat domain (List_Bact_rpt);
                     pfam09479"
                     /db_xref="CDD:462813"
     Region          3043..3084
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          3104..3144
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          <3179..3204
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
ORIGIN      
        1 mkkrilslll aacmlvgllp taafaaepee alyaqmlelg ivdadgtlie dntftvndgt
       61 slssltelie wlnecgdsdl ekvvtvdatg rsatvenlmy allieyqiae vagqlkllas
      121 gensaaayat gdtidttahd levrmvmsfq anssvyslrv nlydkntnkt alaphditve
      181 vgmfadflnv gqenyaadgt envpgtnyfk rftieegsss itfqldlkkl rekylskyng
      241 lwdgnsyllf qartvstfsr mpdssdticv riapskeadp vvsainggti igmnndskqd
      301 ilpyhldwst tatetvgnkd yfvketaipa akgseygdst ygwmdsfnra lragvgdanp
      361 avnlknvtiw tkdddtlgvp slsikegsdl vligtgaiky dgieftdgss aldyltevak
      421 vqdtswdnpn snfynkcksh dwhlvrfinv evpigisgtn vhyprnwyln vdwikqndqv
      481 tripeeilmh gamtivddta ptiksitvpa yenktssana nfypgnvipi vvtftepvyg
      541 dyklvylegt esvtlssnsg arttvdgdvy rnnnpilsnt rvfyytvkst dntvpsenit
      601 desqlpgiiv qgvmpvssac tdvyknafet nayisgsnda yqalskpttl ltgcikggdl
      661 kysfqsmtat pdskdpckin fqveldnaea frtqclnwat nanhhtatvy mykngvepet
      721 iptvdlqpvv vdagtdnery vlagsmklda vsadttyvae lvfdnfycyg iyatftqrpv
      781 tyagtgayti sidsngwpsg inntvftqdg qrpvlsfkdn ntsytykdln dvtwtvsdpn
      841 vvvvervgtg tgnltlaqsp svrivpkseg tatitlkcgn ngtkdttasn titvtvkdng
      901 tptllfaena ntfyaqvlte qtihfasnls qhepgvndta ggkitaqlya vtgvdgngkp
      961 vlaaksswte elertatslt ipgslftaen isqgntpsfi lrltataqvd strkdlstea
     1021 kilvcaqpav itlagldnpm ftddesikid wtvenfdldk ngdacqfeft iekdgqriyh
     1081 ypdsendeis ktgsytltps kitdpaqlkd yyivtakakn gtdlgwsias stitvykena
     1141 ldieiggvkk dsvtlkneid dtttttepsg ttyggetigg ltdapaiakl rselslmesi
     1201 sinfkdynws ilndaiqwtt stgqgeeisd elqravtiny regmlyaple nysytcylpq
     1261 tilllsglrd gsntvtaqhs slsslsdsvt vnvetlknkl ylfqftpavk tevsyedglg
     1321 kthtvytndd gslalfepng iasdlraasv ssgvsyrgti snlalksgeg ngtrgelypl
     1381 ntlelrraav aqvqllqpng tplantevtl rggvyrnrya asnrddayca gakfakaagq
     1441 tasldgtqdq tfttdangml tvhmdltqft sknnpepvgv gdslefifel rfddyypeiv
     1501 ivdgsltprd amrsgkdivt ltdaknktak pfvavqtisy tgrrldvrrh tgvvgpssny
     1561 psavldstim lwgvedaslt dtgyrfdlra qetgvsvprq krtapkdasf pfssiplvnn
     1621 vvtldsssfv nfdgtrktpl eaalyngsgs ltctialpfg iadlttiekv edapsvtslm
     1681 aniaaygkvg gadteyeyvd kvsdaimldg lsflekmgse igavkavlmp tedptryeay
     1741 lwtgidttel edldydrngi clephyiged ldslvgevsd tftlsdfqam adgsyfedrs
     1801 nllntaagli glpvmlkleg wmtseirynf dkgqwqvltt gggfsagvql efekalhltp
     1861 ygiplttsfl vrggalvdfq tairyaeqlg lewnddtank vndyltalri nayfefyggv
     1921 gydkgftati gvfgqieinn enrfltrkyl kdekerdkag qflqldgeag irgalgagpl
     1981 vaevtlvslg fgagwpfnew ddidkyweea ssglgsawls ddtsglslmy cddetavlvs
     2041 epvvtlqsrd yldegdrvwl ggdsgislms ldkqnklaai etnsypfsap mlsddgkilv
     2101 ylsdadstdv tdvevcysqy ndlldifskg eaisnetggf sgygdssldf dgtkdfagai
     2161 wlreastlnl aagtelnegq rttllngfev vasiwngsqw vttrltengs qefepviavn
     2221 ggkaiavwrs vqtdenafaf tqnrilckiy nngawsnety tlyngsagev tgmtaemltd
     2281 gtaavafsvk denggsdiyy tvvdttvanp edsaktirat tntytdenpq lttvgnqfvl
     2341 gwssvqsltg aeqrdvglrv fdntgapkpi lpeslsdmvs taafdgqfaf vkgadsldel
     2401 sllwndakag sedndvirai kfglyngsyi ssaaievael partglthmd arvtnddgts
     2461 iqaviqgtts tvidesdpkt ydtfdysykl dgeeysvsvr ipketvnlls asasysdave
     2521 vastmvdytt latesyvpvn ftvanqgmhv inrvtiqlgg akeqtfdnlt ilpgqtktfs
     2581 fvtktgneir nldysveasf hggqkpkvag tvyldypdvg isaltvtkeq dgqrtvlanl
     2641 ynqsaaslnk sdrrvvlgvy sdpecetpln gkyftggttd kpyeliltgd tlaaidgtgy
     2701 tqeiafhigd yvtdakqkda egkvtalkei pdsgvtlfvk arieqmvnre wvvlpeadyq
     2761 nnqkhltfds lltrsenapt tisvemengs tttanvqvrn nslqprtsgn lvaalldqyg
     2821 klletknvgd lslgteevke ssiafsrsga rvvlrygeta sgstgaskad atsitidglp
     2881 ltidsfdans natvenvssg qylltvipag dgatvtvdgk paengiatis ggyykrtftv
     2941 titakdgstt rtytiylnpv psqnsgsddy tlhfetnggs kitalrksfg ttvdltaytp
     3001 trigyiftgw yadkalteki tkvkltgntt vyagwqeaav spftdvpkgs yyekavnwav
     3061 eqgitagtta ttfspnnpct raqavtflwr aagspapens tmsftdvaeg syyhdavlwa
     3121 vengitkgts dtafspnatc traqivtflw rsqkspasds vnpftdvaad ayyadavlwa
     3181 aengvtsgtt attfspnnnc traqivtflw rsmk
//
LOCUS       WP_235228925             260 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Oscillibacter valericigenes].
ACCESSION   WP_235228925
VERSION     WP_235228925.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 260)
  AUTHORS   Davies,D.R., Mahnke Braam,L., Reznikoff,W.S. and Rayment,I.
  TITLE     The three-dimensional structure of a Tn5 transposase-related
            protein determined to 2.9-A resolution
  JOURNAL   J Biol Chem 274 (17), 11904-11913 (1999)
   PUBMED   10207011
REFERENCE   2  (residues 1 to 260)
  AUTHORS   DasSarma,S.
  TITLE     Identification and analysis of the gas vesicle gene cluster on an
            unstable plasmid of Halobacterium halobium
  JOURNAL   Experientia 49 (6-7), 482-486 (1993)
   PUBMED   8335077
REFERENCE   3  (residues 1 to 260)
  AUTHORS   Ferrante,A.A. and Lessie,T.G.
  TITLE     Nucleotide sequence of IS402 from Pseudomonas cepacia
  JOURNAL   Gene 102 (1), 143-144 (1991)
   PUBMED   1650732
REFERENCE   4  (residues 1 to 260)
  AUTHORS   De Meirsman,C., Van Soom,C., Verreth,C., Van Gool,A. and
            Vanderleyden,J.
  TITLE     Nucleotide sequence analysis of IS427 and its target sites in
            Agrobacterium tumefaciens T37
  JOURNAL   Plasmid 24 (3), 227-234 (1990)
   PUBMED   1963949
REFERENCE   5  (residues 1 to 260)
  AUTHORS   Sato,S., Nakada,Y. and Shiratsuchi,A.
  TITLE     IS421, a new insertion sequence in Escherichia coli
  JOURNAL   FEBS Lett 249 (1), 21-26 (1989)
   PUBMED   2542093
REFERENCE   6  (residues 1 to 260)
  AUTHORS   Kroger,M. and Hobom,G.
  TITLE     Structural analysis of insertion sequence IS5
  JOURNAL   Nature 297 (5862), 159-162 (1982)
   PUBMED   6281654
REFERENCE   7  (residues 1 to 260)
  AUTHORS   Klaer,R., Kuhn,S., Tillmann,E., Fritz,H.J. and Starlinger,P.
  TITLE     The sequence of IS4
  JOURNAL   Mol Gen Genet 181 (2), 169-175 (1981)
   PUBMED   6268937
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01609.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..260
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=30141
     Region          <31..208
                     /region_name="transpos_IS4_1"
                     /note="IS4 family transposase; NF033592"
                     /db_xref="CDD:468101"
ORIGIN      
        1 mpnvggvvhi hdrfqtefht elkaayfnst kdgrgynllh lnalydlesq lyldtviqdg
       61 qeehesralv elvdrselte pviliadcgy eaynnmahme qkyrwipskv hfdyirdtsd
      121 alypisfrvv rfavkeglye tvitnlpadr fpppllrely hkrwgietsf rdlkytlalt
      181 hfhakkrsfi kqeifsrmtl ynfasllrlh aiftqsegky lyrlnaafaa hiarefllgf
      241 ipatkveplv akfplpvrpg
//
LOCUS       WP_235228954             236 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Oscillibacter valericigenes].
ACCESSION   WP_235228954
VERSION     WP_235228954.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 236)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..236
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=26238
     Region          5..233
                     /region_name="resp_reg_YycF"
                     /note="response regulator YycF; NF040534"
                     /db_xref="CDD:439744"
ORIGIN      
        1 mdnqktvliv edeknivdiv kfnlqregyr tleaydgqdg ldkartenpd lilldvmlpr
       61 migfdvcktl raegnnvpvi iltareeead kvlgleigad dyitkpfsmr eliarvaani
      121 rrsamvaaaa paasasampv agdlsintds hqvfrggkpv dltqreyell tflashpnkv
      181 ysrvdlmeqv wnygyvgddv rtvdvtvrrl rekieadpan payiltrrga gyyfsv
//
LOCUS       WP_235228966              67 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfurtransferase TusA family protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235228966
VERSION     WP_235228966.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 67)
  AUTHORS   Ikeuchi,Y., Shigi,N., Kato,J., Nishimura,A. and Suzuki,T.
  TITLE     Mechanistic insights into sulfur relay by multiple sulfur mediators
            involved in thiouridine biosynthesis at tRNA wobble positions
  JOURNAL   Mol Cell 21 (1), 97-108 (2006)
   PUBMED   16387657
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013379.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01206.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..67
                     /product="sulfurtransferase TusA family protein"
                     /calculated_mol_wt=7056
     Region          1..67
                     /region_name="SirA_like_N"
                     /note="a protein of unknown function with an N-terminal
                     SirA-like domain. The SirA, YedF, YeeD protein family is
                     present in bacteria as well as archaea. SirA (also known
                     as UvrY, and YhhP) belongs to a family of a two-component
                     response regulators that...; cd03421"
                     /db_xref="CDD:239513"
     Site            order(2..3,6,9..12,14)
                     /site_type="other"
                     /note="CPxP motif"
                     /db_xref="CDD:239513"
ORIGIN      
        1 mvdtrglscp ipvvmvqqai kkdapaklev ladakvaven itrlattsgy qvsvvedgld
       61 fkltltk
//
LOCUS       WP_235228730             383 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Oscillibacter valericigenes].
ACCESSION   WP_235228730
VERSION     WP_235228730.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..383
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=43385
     Region          2..366
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mkivlvidqf ddanngttis arrfakalkd hgnevrviai gkpadykyav kqmkflpvme
       61 hlvtsqgmrl aipnkhvfek aaawadvvhf mmpsplavtg lrhveklgip htaafhcqpe
      121 nitytfhlgr skrandllys gfrdtfynrf thihcpsnmi tnqlrqhgyt aqlhvisngi
      181 spqyfygklp kedwmkgyfn vlmvgryage krqdvlieac arshhakeiq vilagkgple
      241 kkyrklaekl qnpivmqfye perlidilhm adlyvhtsda eieamscmea facglvpiia
      301 essrsatpqf aldgrslfpa gdsaalaaqi dwwiehpeer ktmelryaeh akqyameesi
      361 kkteemfrma iaeqgaarka vhp
//
LOCUS       WP_235228991            1443 aa            linear   BCT 02-MAR-2025
DEFINITION  S-layer homology domain-containing protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235228991
VERSION     WP_235228991.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 1443)
  AUTHORS   Mesnage,S., Fontaine,T., Mignot,T., Delepierre,M., Mock,M. and
            Fouet,A.
  TITLE     Bacterial SLH domain proteins are non-covalently anchored to the
            cell surface via a conserved mechanism involving wall
            polysaccharide pyruvylation
  JOURNAL   EMBO J 19 (17), 4473-4484 (2000)
   PUBMED   10970841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012613.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00395.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1443
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..1443
                     /product="S-layer homology domain-containing protein"
                     /calculated_mol_wt=149690
     Region          664..729
                     /region_name="Flg_new"
                     /note="Listeria-Bacteroides repeat domain (List_Bact_rpt);
                     pfam09479"
                     /db_xref="CDD:462813"
     Region          703..>1113
                     /region_name="AidA"
                     /note="Autotransporter adhesin AidA [Cell
                     wall/membrane/envelope biogenesis, Intracellular
                     trafficking, secretion, and vesicular transport]; COG3468"
                     /db_xref="CDD:442691"
     Region          1187..1266
                     /region_name="Flg_new_2"
                     /note="Divergent InlB B-repeat domain; pfam18998"
                     /db_xref="CDD:436898"
     Region          1272..1312
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
ORIGIN      
        1 mkqhrtlrrg lsillslvlc lsllpavtlt vaaaddhthc icgskvtdcg hdgedvewta
       61 wvesdslpnt vghyyltkdv tltetwkpkn ntylclngkt itanfegsvi tisswtdfyl
      121 tdcadaanpg vvthgvkgdg tkyagrgvei esneyagtfh myggsisgni itgesnqqga
      181 gvmvgyqgsf rmyggvicdn kavctadsgs aqgggvysay kfymyggkit gndvsadnpq
      241 gggvfvsgpa smggtpvikg ntatvtgqps kpnnylvsny sgqdsglnir sslkdgayig
      301 inrnsdseed fargngytin dsdagkfipd dsnyvivmgn ynygslklle rsaanvasvt
      361 igsettgyid lqkaiqavid ssektgtvkl lkdvmlansi tleqgvditl dmnghnliam
      421 kvnadsfiti dqsklnitgk gtietsstyn krvnntihvk dgsactvgkd isisnnparv
      481 lymsgdsect vsgslkartv aieiragklt iddpavleay gnynapteng ggdninlgci
      541 alavsplesd lpitvnikgg tfiaknifmq dkagnslyev dlchsenpsk nvsinisgge
      601 fqqpvqslnd kltlsggsfa kltasetlsa llakdygfks idgnnitlte gqkevenvtv
      661 dklytvsfda nggsgsmdve tavsgnytlp ecgfdapqgl qfvgwatsks gevisdttit
      721 vtedttlyai wginygvtvn gvkvtslnkd nvlgndkvqy dpatktlslk nfvagdltva
      781 gdgetivnis dnlgapavge ltvtdakdvv vtsnsgapai ygeadisctg kvtitnskgm
      841 avsapltvtn aqnvtvegyg gqaiagitdi tctgnvtitn skgmavsapl tvnsakdvti
      901 tantstapai agkaditcsg dvkitnstgi avnsgltvks akdvtvtant aspaiagaad
      961 itcsgkvdit nstgmavsdg ltvksakdvi vtantenten tdypaiggtv ditctgkvdi
     1021 tnkagmavsg altvknakdv tvtantaspa iagaaditcs gdvtisntgg gkavqgtlty
     1081 knagnvhsct veagldldnl shitdvavge tftdtlaysa vkitvphtad ewkssstqhw
     1141 qvctvceeef nradhtfsgs tctvcgytks sgggssssgg sssaptyapt vtqpengtvt
     1201 vspkapkkgd tvtitpkped gytveqilvt dkngdpvevi nngdgtfsft qpagkvtvka
     1261 tfmednsmln ffvdvpagay yydavlwaae nditggvddt hfapnapctr aqivtflwrt
     1321 agspepksls sfadvsadsy yakavawave ngittgtgdg ttfspnapct raqamtflwr
     1381 sqkspaagta npftdvaadi ycadavqwav engitggtta ttfspnasct raqivtflyr
     1441 clg
//
LOCUS       WP_235229085             372 aa            linear   BCT 02-MAR-2025
DEFINITION  Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal
            domain [Oscillibacter valericigenes].
ACCESSION   WP_235229085
VERSION     WP_235229085.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 372)
  AUTHORS   Baumer,S., Ide,T., Jacobi,C., Johann,A., Gottschalk,G. and
            Deppenmeier,U.
  TITLE     The F420H2 dehydrogenase from Methanosarcina mazei is a
            Redox-driven proton pump closely related to NADH dehydrogenases
  JOURNAL   J Biol Chem 275 (24), 17968-17973 (2000)
   PUBMED   10751389
REFERENCE   2  (residues 1 to 372)
  AUTHORS   Alex,L.A., Reeve,J.N., Orme-Johnson,W.H. and Walsh,C.T.
  TITLE     Cloning, sequence determination, and expression of the genes
            encoding the subunits of the nickel-containing
            8-hydroxy-5-deazaflavin reducing hydrogenase from Methanobacterium
            thermoautotrophicum delta H
  JOURNAL   Biochemistry 29 (31), 7237-7244 (1990)
   PUBMED   2207102
REFERENCE   3  (residues 1 to 372)
  AUTHORS   Shuber,A.P., Orr,E.C., Recny,M.A., Schendel,P.F., May,H.D.,
            Schauer,N.L. and Ferry,J.G.
  TITLE     Cloning, expression, and nucleotide sequence of the formate
            dehydrogenase genes from Methanobacterium formicicum
  JOURNAL   J Biol Chem 261 (28), 12942-12947 (1986)
   PUBMED   3531194
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016328.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04432.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..372
                     /product="Coenzyme F420 hydrogenase/dehydrogenase, beta
                     subunit C-terminal domain"
                     /calculated_mol_wt=40580
     Region          <11..55
                     /region_name="DMSOR_beta-like"
                     /note="Beta subunit of the DMSO Reductase (DMSOR) family;
                     cl25360"
                     /db_xref="CDD:355383"
     Region          85..350
                     /region_name="FrhB"
                     /note="Coenzyme F420-reducing hydrogenase, beta subunit
                     [Energy production and conversion]; COG1035"
                     /db_xref="CDD:440658"
ORIGIN      
        1 mlstialdtq vikpglctgc gacqgmcpyw dsvegrtlcy fdcerksgrc qsfcprmpmd
       61 ldalrkkffp edtiipeigp frglyltraa dpairakaqh ggtmtalvel aiqegfidaa
      121 vmtrsqggle pegvlattae evracsgssf qvpptlavln kalkedryhs igvvgtpckt
      181 lavykmkskp laendnhadn igmvfglfcg wgldwegird ltarhadpek vshmdippsk
      241 yhslelreng etvsvnldev tplvrsgcry ctdmtaefad lsvggarsad gwdvdkgwnq
      301 vivrsekgmq llelarekgi lefkdtpetg ldklkgasmg kkrtgvknlr qltgseddlg
      361 ylnpsaelfk dl
//
LOCUS       WP_235229128             491 aa            linear   BCT 02-MAR-2025
DEFINITION  pyridoxal-phosphate dependent enzyme [Oscillibacter valericigenes].
ACCESSION   WP_235229128
VERSION     WP_235229128.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012512.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00291.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..491
                     /product="pyridoxal-phosphate dependent enzyme"
                     /calculated_mol_wt=54623
     Region          <133..384
                     /region_name="CysK"
                     /note="Cysteine synthase [Amino acid transport and
                     metabolism]; COG0031"
                     /db_xref="CDD:439802"
ORIGIN      
        1 midlsinkqg lehnikkare ngiiiptiaq mqhpetipgk vqdklkdvgl wdvnplnlfr
       61 itwknqpkes gglfqevpny ielpsaltgv pcrivamvgk wfptgchkvg asfgclaprl
      121 vtgqfdvdkh kavwpstgny crggafnsrl lgaqgvailp aemsqerfdw lheigaevia
      181 tpgcesnvke ifdktnelkq nplymifnqf eemgnplwhy nvtgnaladv feaikrpgdh
      241 fagacftsgs agtmstgdrl kelypklklg vgealqcpti lnngfgghri egigdkhipw
      301 ihnvkntdma iaiddedsqr llrlfntpeg qdyllntlkl dpvlvekltw lgisgianvl
      361 ccikmakyye ftehdvvgtv ltdsavmygs riaelnemhg aynateavld hnlhmlglkt
      421 dnlieltyad rkrvhnlkyy twveqqgkts eelnalwydt egtwdavhaq akdldelina
      481 fneesgvlkn l
//
LOCUS       WP_235229238             370 aa            linear   BCT 02-MAR-2025
DEFINITION  amidoligase family protein [Oscillibacter valericigenes].
ACCESSION   WP_235229238
VERSION     WP_235229238.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 370)
  AUTHORS   Iyer,L.M., Burroughs,A.M. and Aravind,L.
  TITLE     Unraveling the biochemistry and provenance of pupylation: a
            prokaryotic analog of ubiquitination
  JOURNAL   Biol Direct 3, 45 (2008)
   PUBMED   18980670
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023645.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12224.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..370
                     /product="amidoligase family protein"
                     /calculated_mol_wt=42701
     Region          <158..320
                     /region_name="Amidoligase_2"
                     /note="Putative amidoligase enzyme; pfam12224"
                     /db_xref="CDD:432409"
ORIGIN      
        1 mmtetficch cgqthplenr vmvgddalce rcaneetvic srcgervyrd dnagdentpl
       61 cqpcydrhyt scercgriih vddayyeddd eddplcydch tharrnkmie dyyykpeplf
      121 rgdgsryfgv eleidgaged dasarkvmei angnglenly ckhdgslddg femvthpmtl
      181 eyhmkempwg kilqeairlg ytshqantcg lhvhvnrdaf gdseeaqdav iarilyffek
      241 nweellkfsr rtprqlerwa trygykdqpk elldhakkgy hggrytsvnl tnvdtiefri
      301 frgtlkfntl iatlqlldri cdvaicltdd qvkamswttf asgctqpelv qylkerrlyv
      361 ndpveseeev
//
LOCUS       WP_235229290             563 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Oscillibacter valericigenes].
ACCESSION   WP_235229290
VERSION     WP_235229290.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 563)
  AUTHORS   Mande,S.S., Sarfaty,S., Allen,M.D., Perham,R.N. and Hol,W.G.
  TITLE     Protein-protein interactions in the pyruvate dehydrogenase
            multienzyme complex: dihydrolipoamide dehydrogenase complexed with
            the binding domain of dihydrolipoamide acetyltransferase
  JOURNAL   Structure 4 (3), 277-286 (1996)
   PUBMED   8805537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07992.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..563
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=61083
     Region          18..441
                     /region_name="Pyr_redox_2"
                     /note="Pyridine nucleotide-disulphide oxidoreductase;
                     cl39093"
                     /db_xref="CDD:476868"
     Region          453..543
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            513
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238089"
ORIGIN      
        1 mkvvivggva ggataaarir rleeqaeivv fersgfisya ncglpyyigg vienpeeltl
       61 qtpesffsrf rvnmkvrhev taihpdkktv svtnletgda feesydklil spgakptqpr
      121 lpgvgldklf tlrtvedtfr ikeyidrnrp rsavlagggf islelaenlr elgmevtivq
      181 rpkqlmnpfd pdiasfihse mrrhgvklal ghtvegfeek nggvdvllkd eaplhadmvv
      241 laigvspdth laqeaglelg ikgsivvndr metsvpdiya vgdavqvkhf vtgqdvllsl
      301 agpankqgri aadnicggds hymgsqgssv ikvfdmtaas tgvnetnakk agldvdtvvl
      361 spmshagyyp ggkvmtmkvv feketyrllg aqivgyegvd kridvlatai ragmkatelk
      421 dldlayappy ssakdpvnma gfmieniang vlkqwhlada dtlprdgsvt lldtrtveef
      481 ahghidgftn ipvdelrerl geldkskpvy vicqsglrsy iacrilagng fdcynfsggf
      541 rfydavmndr cliesatacg mdk
//
LOCUS       WP_235229332             219 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing protein [Oscillibacter valericigenes].
ACCESSION   WP_235229332
VERSION     WP_235229332.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 219)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01966.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..219
                     /product="HD domain-containing protein"
                     /calculated_mol_wt=24421
     Region          1..219
                     /region_name="COG3294"
                     /note="Metal-dependent phosphatase/phosphodiesterase, HD
                     supefamily [General function prediction only]"
                     /db_xref="CDD:442523"
ORIGIN      
        1 mltfedvknn aairtyiqra deslialgft ehsfahvtmv aenaayilet lgypartvel
       61 triaaflhdi gnlvnrvdhs qsgavmafri ldnlncdpee iativtaign hdegtgqpvn
      121 avaaalilad ksdvrrsrvr nqdpatfdih drvnysvkks qlkineehtl iklklsvdtk
      181 ygsvmdyfei fmgrmilcrk aaeklglqfk lmineqqli
//
LOCUS       WP_235229392             515 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235229392
VERSION     WP_235229392.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..515
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=56169
     Region          46..497
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mkkrltafll laallcaalt gcgggsteqt paekepstpd apvaneitvg iaqdlddsld
       61 phktvkagtr evmfnvfegl vkptpdgdlt pavaenytvs edrltytftl regvkfhngd
      121 tvtaedvvys inrcaaatet givqveafsv iqniaaader tvtitiaeps neflsyltva
      181 vlpsdydkqd tapigtgpfk fvsraaqdsm vlekfdeywg tpanldkvtl kiienadslm
      241 mslqsgaidl cshltstqva qlgddfnvae gtmnlvqamy lnnaekpfdd vrvrqalcya
      301 vdkqaiidia fdgygspigs smypafgkyf ddsltnyytk dvdkakalla dagypngfem
      361 titvpsnykp hmdtaevlvq qlaeigvkat iqpieweswv sdvyvgrqfq stvvgvdast
      421 mtarallerf tstygknfin ynsadydalf qqvlsssdda eqtslykqme qnltenaanv
      481 yiqdladlva vrkglegvtf ypiyvldlat iryak
//
LOCUS       WP_235229462             212 aa            linear   BCT 02-MAR-2025
DEFINITION  CatA-like O-acetyltransferase [Oscillibacter valericigenes].
ACCESSION   WP_235229462
VERSION     WP_235229462.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012523.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00302.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..212
                     /product="CatA-like O-acetyltransferase"
                     /calculated_mol_wt=23793
     Region          1..206
                     /region_name="CatA"
                     /note="Chloramphenicol O-acetyltransferase [Defense
                     mechanisms]; COG4845"
                     /db_xref="CDD:443873"
ORIGIN      
        1 mncrvinmeq dprkeqyayf rnfanpyvgl tvnvditglm trkvrgeslf lltlyavsra
       61 ansvpelrrr irgdqvveyd wcptshteal dngaycycrl sadmpledfl pyakaaqegv
      121 keapslddge egeslffvsc vpwvsytamv qpvpspadsn pritwgryfq qegrtllpvt
      181 llanhalvdg lhiarfyeal drelaaigte et
//
LOCUS       WP_235229503             726 aa            linear   BCT 02-MAR-2025
DEFINITION  5'-nucleotidase C-terminal domain-containing protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235229503
VERSION     WP_235229503.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 726)
  AUTHORS   Knofel,T. and Strater,N.
  TITLE     X-ray structure of the Escherichia coli periplasmic 5'-nucleotidase
            containing a dimetal catalytic site
  JOURNAL   Nat Struct Biol 6 (5), 448-453 (1999)
   PUBMED   10331872
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014871.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02872.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..726
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /GO_process="GO:0009166 - nucleotide catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=76868
     Region          37..513
                     /region_name="UshA"
                     /note="2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or
                     3'-nucleotidase, 5'-nucleotidase family [Nucleotide
                     transport and metabolism, Defense mechanisms]; COG0737"
                     /db_xref="CDD:440500"
     Region          539..580
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          599..640
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
ORIGIN      
        1 mkmkkllsll lalvmmfslt vtagavetdd ndltgaivil htndvhgais eyakvaalkd
       61 tyekmgayvl lmdvgdfiqg dpvvsisqga tavelmnlag ydvvttgnhe fdygyanlak
      121 lageakfpvv aanvlykgkt afednvtfts psgvkigvfg latpetatka npakikdvkf
      181 lggqsmfdca qaqvdslkad gcdiivclgh lgidaestgn rsvdlleeve gidifidghs
      241 hsdldaimka tddtgmvgdt lltstgtkln nvgvvviadd gamtmqfatk dlivtpdkai
      301 adraaaiqke idddygnvfa ktevdlngak aqvrtdetnl gdlitdalvw gakdagikvd
      361 aavtngggir asiakgditk kdintvlpfg ntlsivkltg aellealeas tyctpesigg
      421 fphvsgivft ldttkafdag dlypgstyha pksvgrvtiq siggrafdpk atytiatndf
      481 maaggdtyya fnaagfvdtg vpmdevvmdy ikeelngkvt aadygtpagr itiieglpft
      541 dvpagasyyd alkfvyenni fkgftettfg pnntltrgqm vtvlwrmngs pepkadcpfg
      601 dvaanspfrk aiawaaengl tngytpttfa pnqaisrqqf ltilyryakf mgydvsvgen
      661 tnilsyedva qvsevfipam qwacgsgvlv aektltptap alryqvaefl anfcqkvvpa
      721 attkaa
//
LOCUS       WP_235229523             211 aa            linear   BCT 02-MAR-2025
DEFINITION  TrkA C-terminal domain-containing protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235229523
VERSION     WP_235229523.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 211)
  AUTHORS   Anantharaman,V., Koonin,E.V. and Aravind,L.
  TITLE     Regulatory potential, phyletic distribution and evolution of
            ancient, intracellular small-molecule-binding domains
  JOURNAL   J Mol Biol 307 (5), 1271-1292 (2001)
   PUBMED   11292341
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014171.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02080.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..211
                     /product="TrkA C-terminal domain-containing protein"
                     /GO_function="GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0006813 - potassium ion transport
                     [Evidence IEA]"
                     /calculated_mol_wt=23070
     Region          1..>130
                     /region_name="C_P_lyase_phnF"
                     /note="phosphonates metabolism transcriptional regulator
                     PhnF; TIGR02325"
                     /db_xref="CDD:131378"
     Region          10..72
                     /region_name="WHTH_GntR"
                     /note="Winged helix-turn-helix (WHTH) DNA-binding domain
                     of the GntR family of transcriptional regulators; cd07377"
                     /db_xref="CDD:153418"
     Site            order(10,33,35..36,44..48,50..51,54,64..65,67..70)
                     /site_type="DNA binding"
                     /note="DNA-binding site [nucleotide binding]"
                     /db_xref="CDD:153418"
     Region          <136..205
                     /region_name="KhtT"
                     /note="K+/H+ antiporter KhtSTU, c-di-AMP-binding
                     regulatory subunit KhtT, contains RCK_C (TrkA_C) domain
                     [Inorganic ion transport and metabolism, Signal
                     transduction mechanisms]; COG0490"
                     /db_xref="CDD:440256"
ORIGIN      
        1 mkqtvvpsqy lqialdiarr iakgelpegq rvygrsvmas eynvspetir ralrllsdmk
       61 vvevkpqsgv vvlsadsarr yienfeesad vralrqqlkd lmaeyadlsr rlsdtvaalm
      121 ksretfaaad epfpnyevpv pkdspligrs igelkfwqst ggtivairrg qtvilspgpy
      181 aqlyggdviv lvgspaaaea ahrlvtekev p
//
LOCUS       WP_235229552             443 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Oscillibacter valericigenes].
ACCESSION   WP_235229552
VERSION     WP_235229552.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 443)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 443)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..443
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=47254
     Region          1..434
                     /region_name="LdcC"
                     /note="Arginine/lysine/ornithine decarboxylase [Amino acid
                     transport and metabolism]; COG1982"
                     /db_xref="CDD:441585"
ORIGIN      
        1 metpiydflr rydgagmarf hmpghkgktf lgcehldite vkgadalyea dgiiaqsean
       61 attlfgsrrt cystegssqc irammylalt crptgaaqvi vavrnvhkaf vyaaallnfe
      121 vvwlwpeesc slcacpvspe glektlaslp apptavylts pdylggmadi aalaevchrh
      181 gtllavdnah gaylrflsps rhpldlgadl ccdsahktlp vltggaylhi skhasavlae
      241 hakaalalfg stspsyltma sldlcngyla aeyparlaet aerldqvrnr lrasgwqved
      301 sdplrltlrt peglagtala drlrqsgvec eyadgdflil mvtpenapsd fdrlltalge
      361 nhalytpsap lplakgervc sirealfaph etiptgqalg ricgaptvsc ppaipiavsg
      421 evigpenlal faqygvetvd vlk
//
LOCUS       WP_235229294             256 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF134 domain-containing protein [Oscillibacter valericigenes].
ACCESSION   WP_235229294
VERSION     WP_235229294.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 256)
  AUTHORS   Brazda,V., Luo,Y., Bartas,M., Kaura,P., Porubiakova,O., Stastny,J.,
            Pecinka,P., Verga,D., Da Cunha,V., Takahashi,T.S., Forterre,P.,
            Myllykallio,H., Fojta,M. and Mergny,J.L.
  TITLE     G-Quadruplexes in the Archaea Domain
  JOURNAL   Biomolecules 10 (9), 1349 (2020)
   PUBMED   32967357
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014101.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02001.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..256
                     /product="DUF134 domain-containing protein"
                     /calculated_mol_wt=27475
     Region          1..98
                     /region_name="COG1342"
                     /note="Predicted DNA-binding protein, UPF0251 family
                     [General function prediction only]"
                     /db_xref="CDD:440953"
     Region          126..>187
                     /region_name="NifX"
                     /note="Predicted Fe-Mo cluster-binding protein, NifX
                     family [Posttranslational modification, protein turnover,
                     chaperones]; COG1433"
                     /db_xref="CDD:441042"
ORIGIN      
        1 mprpkkcrrv cdyprtltfl pedlkdreqa viltvdeyet irlidkegls qeqcgdfmqv
       61 arttvqqiya sarkkladvl vdglplrieg gdyqlcnggn racgcsncyk qkfnqlyekp
      121 kgehimriav tyengeifqh fghteqfkvy dvengkimsa evvdtngsgh galagvlsal
      181 hvdalicggi gggaqaalaa agiqlyggvs gdadqaaeal aagtlaynpn vmcshhgehh
      241 hegncgdhgc ghhscg
//
LOCUS       WP_235229615             287 aa            linear   BCT 02-MAR-2025
DEFINITION  class I SAM-dependent methyltransferase [Oscillibacter
            valericigenes].
ACCESSION   WP_235229615
VERSION     WP_235229615.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 287)
  AUTHORS   Martin,J.L. and McMillan,F.M.
  TITLE     SAM (dependent) I AM: the S-adenosylmethionine-dependent
            methyltransferase fold
  JOURNAL   Curr Opin Struct Biol 12 (6), 783-793 (2002)
   PUBMED   12504684
  REMARK    Erratum:[Curr Opin Struct Biol. 2003 Feb;13(1):142]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022137.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10672.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..287
                     /product="class I SAM-dependent methyltransferase"
                     /EC_number="2.1.1.-"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=31950
     Region          <65..>197
                     /region_name="RlmK"
                     /note="23S rRNA G2069 N7-methylase RlmK or C1962
                     C5-methylase RlmI [Translation, ribosomal structure and
                     biogenesis]; COG1092"
                     /db_xref="CDD:440709"
ORIGIN      
        1 mwiadkwqdy elldcgggek lerwdkqvlv rpdpqaiwet phqnpawkrv garylrsqtg
       61 gghwekkalp eswkvhygel tfqvkpmnfk htglfpeqav nwdfvmdkir ssgrpirvln
      121 lfaytggatv acakagasvc hvdaakgmva warenaklsg ledapirwii ddcakfvere
      181 irrgktydai imdppsygrg pggevwklee nlydfvklca gvlsdkplfv linsyttgla
      241 psvlgyllni lvaskyggkc twdelglpvt etglalpcga tgrwfse
//
LOCUS       WP_235229630             153 aa            linear   BCT 02-MAR-2025
DEFINITION  S1 RNA-binding domain-containing protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235229630
VERSION     WP_235229630.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Bycroft,M., Hubbard,T.J., Proctor,M., Freund,S.M. and Murzin,A.G.
  TITLE     The solution structure of the S1 RNA binding domain: a member of an
            ancient nucleic acid-binding fold
  JOURNAL   Cell 88 (2), 235-242 (1997)
   PUBMED   9008164
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012784.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00575.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..153
                     /product="S1 RNA-binding domain-containing protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /calculated_mol_wt=16447
     Region          1..145
                     /region_name="YabR"
                     /note="Predicted RNA-binding protein, contains ribosomal
                     protein S1 (RPS1) domain [General function prediction
                     only]; COG1098"
                     /db_xref="CDD:440715"
ORIGIN      
        1 melqvgsile gkvttitkfg afvaleggks glvhiseian tfvndvhdfl qegqtvkvlv
       61 lstengkinl sikktqpqer paprpatggr pvsrpapqqp rsfsrppqqa aqapsgdqsf
      121 edklkqflss segkmadlnr sidgkrgggr rrr
//
LOCUS       WP_235229641             400 aa            linear   BCT 02-MAR-2025
DEFINITION  winged helix-turn-helix domain-containing protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235229641
VERSION     WP_235229641.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 400)
  AUTHORS   Wietzorrek,A. and Bibb,M.
  TITLE     A novel family of proteins that regulates antibiotic production in
            streptomycetes appears to contain an OmpR-like DNA-binding fold
  JOURNAL   Mol Microbiol 25 (6), 1181-1184 (1997)
   PUBMED   9350875
REFERENCE   2  (residues 1 to 400)
  AUTHORS   Martinez-Hackert,E. and Stock,A.M.
  TITLE     The DNA-binding domain of OmpR: crystal structures of a winged
            helix transcription factor
  JOURNAL   Structure 5 (1), 109-124 (1997)
   PUBMED   9016718
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012698.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00486.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..400
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=46015
     Region          7..244
                     /region_name="DnrI"
                     /note="DNA-binding transcriptional regulator
                     DnrI/AfsR/EmbR, SARP family, contains BTAD domain
                     [Transcription]; COG3629"
                     /db_xref="CDD:442847"
     Region          <332..>382
                     /region_name="Nucleotidyl_cyc_III"
                     /note="Class III nucleotidyl cyclases; cl11967"
                     /db_xref="CDD:448371"
ORIGIN      
        1 meytgslrvy mlggfemyyd gallqmkkkq tskpvqllql llyhkedgis rhalletlyg
       61 qeteidaans lnatvsqlrk llrdthlpde nyirvkfdry yfessfptwv dteeaahlrq
      121 sadlmsgidr vntlyrlcdl yrgrflpeld geswveiara gyqriyrdsl nevcralker
      181 gayneilrlt glaskifpfd ewqvwqqesl laqgrireah elyrqvekly lteldapppe
      241 rmrarfrkpe keswrkseta gevrrwlgsa eengpycipl pgfldvyrit srmceatdtp
      301 fclllctlss adgrsnpear tfhgameqle laitqslrag diftrysgsq flviligaqe
      361 enldaisqri sqrfrgitds arlclvcqlf stagtpfsek
//
LOCUS       WP_235229355             124 aa            linear   BCT 02-MAR-2025
DEFINITION  desulfoferrodoxin family protein [Oscillibacter valericigenes].
ACCESSION   WP_235229355
VERSION     WP_235229355.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 124)
  AUTHORS   Devreese,B., Tavares,P., Lampreia,J., Van Damme,N., Le Gall,J.,
            Moura,J.J., Van Beeumen,J. and Moura,I.
  TITLE     Primary structure of desulfoferrodoxin from Desulfovibrio
            desulfuricans ATCC 27774, a new class of non-heme iron proteins
  JOURNAL   FEBS Lett 385 (3), 138-142 (1996)
   PUBMED   8647238
REFERENCE   2  (residues 1 to 124)
  AUTHORS   Moura,I., Tavares,P., Moura,J.J., Ravi,N., Huynh,B.H., Liu,M.Y. and
            LeGall,J.
  TITLE     Purification and characterization of desulfoferrodoxin. A novel
            protein from Desulfovibrio desulfuricans (ATCC 27774) and from
            Desulfovibrio vulgaris (strain Hildenborough) that contains a
            distorted rubredoxin center and a mononuclear ferrous center
  JOURNAL   J Biol Chem 265 (35), 21596-21602 (1990)
   PUBMED   2174880
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013996.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01880.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..124
                     /product="desulfoferrodoxin family protein"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=13202
     Region          1..123
                     /region_name="SORL"
                     /note="Desulfoferrodoxin, superoxide reductase-like (SORL)
                     domain [Energy production and conversion]; COG2033"
                     /db_xref="CDD:441636"
ORIGIN      
        1 mkfyickhcg nivtkltstg vplkccgedm vlleagvtea avekhvpavt vegglvkvsv
       61 gsvahpmtae hyipwvalet ekgafiqwpq pgeapevvfa laegqtakav yawcnlhglw
      121 kael
//
LOCUS       WP_235229511             260 aa            linear   BCT 02-MAR-2025
DEFINITION  cell wall hydrolase [Oscillibacter valericigenes].
ACCESSION   WP_235229511
VERSION     WP_235229511.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 260)
  AUTHORS   Boland,F.M., Atrih,A., Chirakkal,H., Foster,S.J. and Moir,A.
  TITLE     Complete spore-cortex hydrolysis during germination of Bacillus
            subtilis 168 requires SleB and YpeB
  JOURNAL   Microbiology (Reading) 146 (Pt 1), 57-64 (2000)
   PUBMED   10658652
REFERENCE   2  (residues 1 to 260)
  AUTHORS   Ishikawa,S., Yamane,K. and Sekiguchi,J.
  TITLE     Regulation and characterization of a newly deduced cell wall
            hydrolase gene (cwlJ) which affects germination of Bacillus
            subtilis spores
  JOURNAL   J Bacteriol 180 (6), 1375-1380 (1998)
   PUBMED   9515903
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019128.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07486.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..260
                     /product="cell wall hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=27546
     Region          41..125
                     /region_name="Cu_amine_oxidN1"
                     /note="Copper amine oxidase N-terminal domain; pfam07833"
                     /db_xref="CDD:400265"
     Region          141..259
                     /region_name="CwlJ"
                     /note="Cell wall hydrolase CwlJ, involved in spore
                     germination [Cell cycle control, cell division, chromosome
                     partitioning, Cell wall/membrane/envelope biogenesis];
                     COG3773"
                     /db_xref="CDD:442987"
ORIGIN      
        1 mkkealcgll aaaalalpaq aartvpvqvd gtrlagssyl edgvtytplr ylldamggwt
       61 vswdsqaqaa vavsgktria adpaentvtv ngrsysaqvt vrngrtyvpl rmvsealggs
      121 aawdpwmsga avtsagaehd aadlywlsri isaescgesm egqiavgnvv lnrvasrefp
      181 dtvpgvifdk vdgvqfepvs ngtvyktpta qsveaarrvl ageqvigkal yfyapalsqg
      241 twinanrtyy ktigchrfyl
//
LOCUS       WP_235229533             274 aa            linear   BCT 02-MAR-2025
DEFINITION  papain-like cysteine protease family protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235229533
VERSION     WP_235229533.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 274)
  AUTHORS   Shindo,T. and Van der Hoorn,R.A.
  TITLE     Papain-like cysteine proteases: key players at molecular
            battlefields employed by both plants and their invaders
  JOURNAL   Mol Plant Pathol 9 (1), 119-125 (2008)
   PUBMED   18705889
REFERENCE   2  (residues 1 to 274)
  AUTHORS   Mudgett,M.B. and Staskawicz,B.J.
  TITLE     Characterization of the Pseudomonas syringae pv. tomato AvrRpt2
            protein: demonstration of secretion and processing during bacterial
            pathogenesis
  JOURNAL   Mol Microbiol 32 (5), 927-941 (1999)
   PUBMED   10361296
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023802.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12385.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..274
                     /product="papain-like cysteine protease family protein"
                     /calculated_mol_wt=30033
     Region          102..236
                     /region_name="Peptidase_C39_like"
                     /note="Peptidase family C39 mostly contains
                     bacteriocin-processing endopeptidases from bacteria. The
                     cysteine peptidases in family C39 cleave the
                     'double-glycine' leader peptides from the precursors of
                     various bacteriocins (mostly non-lantibiotic). The
                     cleavage...; cl00296"
                     /db_xref="CDD:469710"
     Site            order(102,109,202,226)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:239109"
ORIGIN      
        1 mkktvtlalt vllmlglmsg catdtpadna estksenpta naenfsdemk ipyaidlspe
       61 dgadsvertg dhaaspyfah pdvynlestd tltvlhnfkt qqqtsewacg vtsalmvlew
      121 ygklgdwnee slaalrhsld gtelegypgt tlnqavdife gvggfdivtm qdcpdgiwme
      181 dirnwlaegk pvmicwndwg ghwqvivgyd tmgteaendd vflvadpydt tdhnqdgygv
      241 ypaerlmynf smygafpese ggsdmlflva spte
//
LOCUS       WP_235229801             189 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Oscillibacter
            valericigenes].
ACCESSION   WP_235229801
VERSION     WP_235229801.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 189)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 189)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 189)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 189)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..189
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=20110
     Region          3..175
                     /region_name="CcmA"
                     /note="ABC-type multidrug transport system, ATPase
                     component [Defense mechanisms]; COG1131"
                     /db_xref="CDD:440746"
ORIGIN      
        1 meiqvhnlck syggetvlrd vnftagpgvt clmapsgagk ttllrillgl erpdsgtvrv
       61 pngcrwaavf qedrlleqld amgnlrfvlg kdyreetaaa llaelglgdv gnkpvrdfsg
      121 gmkrrlalar allapsdvlv ldepftgldg enrakalscv rqaaegkpvl lvthdesdaa
      181 dldaallrl
//
LOCUS       WP_235229813             569 aa            linear   BCT 02-MAR-2025
DEFINITION  PEP-utilizing enzyme [Oscillibacter valericigenes].
ACCESSION   WP_235229813
VERSION     WP_235229813.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 569)
  AUTHORS   Herzberg,O., Chen,C.C., Kapadia,G., McGuire,M., Carroll,L.J.,
            Noh,S.J. and Dunaway-Mariano,D.
  TITLE     Swiveling-domain mechanism for enzymatic phosphotransfer between
            remote reaction sites
  JOURNAL   Proc Natl Acad Sci U S A 93 (7), 2652-2657 (1996)
   PUBMED   8610096
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012609.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00391.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..569
                     /product="PEP-utilizing enzyme"
                     /GO_function="GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA]"
                     /GO_process="GO:0016310 - phosphorylation [Evidence IEA]"
                     /calculated_mol_wt=65151
     Region          24..568
                     /region_name="PykA2"
                     /note="Phosphohistidine swiveling domain of PEP-utilizing
                     enzymes [Signal transduction mechanisms]; cl46786"
                     /db_xref="CDD:481126"
ORIGIN      
        1 msdtskilat kftddrfpie wkdeqekslm wfyddlhcpn pisplyfdvg gwwdcdgrwg
       61 sdctymyqrf gapigkawia kniggyvysa vvppemdadk igpmfdyyvk vmpiyadtfl
      121 drwhkmyipr lkeiqnamld cdfehkslpe imihmedmld mkseafrihw iinlaqfqas
      181 tdftnaakaa gaddvligki nvspadrnwd slkalwemke evcrvpalke lflsttdnae
      241 imakvadvpg sekflemmea yrteygfkam ythefiyktw yedptpayea vrtyvnnnyd
      301 ynaeydacmq sqkeaieqly smvsdpeela klkhylelcv kmapitpdhh fyidqgvysh
      361 mrvafvqigk amvregildd aedifmlkyd eircaccsdy pvkelvktrr aemeearkrh
      421 pqewygtate wqvynepyks lwgypqkfea eqkeqaekte isktvlkgip gcpgiqegia
      481 hlvydpseld svkdgevlvc kmtnpawvvs fskisalvtd tggalshpav varefgvpcv
      541 vgtrratqli ktgdkvrvdg thgvvevig
//
LOCUS       WP_235229860             268 aa            linear   BCT 02-MAR-2025
DEFINITION  recombinase RecT [Oscillibacter valericigenes].
ACCESSION   WP_235229860
VERSION     WP_235229860.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 268)
  AUTHORS   Iyer,L.M., Koonin,E.V. and Aravind,L.
  TITLE     Classification and evolutionary history of the single-strand
            annealing proteins, RecT, Redbeta, ERF and RAD52
  JOURNAL   BMC Genomics 3, 8 (2002)
   PUBMED   11914131
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015776.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03837.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..268
                     /product="recombinase RecT"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006259 - DNA metabolic process [Evidence
                     IEA]"
                     /calculated_mol_wt=29672
     Region          7..263
                     /region_name="RecT"
                     /note="RecT family; cl04285"
                     /db_xref="CDD:446337"
ORIGIN      
        1 msdmiqkatt qatakvpdak tsmqvyikqm qgeikkalpa vmtperftri vlsalsanpk
       61 laqttpqsfl aammtaaqlg mepntplgqa ylipyynsks rcnecqfqlg ykglidlayr
      121 sgevsiiqaq vvyehddfty sfglepvlkh ipaasdrgep tyvyamfrtk dggfgfdvms
      181 mdairtfaqq ysksfssgpw qtnfeemakk tvlkkvlkya plksdflrgm aqdgtiktev
      241 sedmymvpgt vvevdsetge vtevsres
//
LOCUS       WP_235229850             156 aa            linear   BCT 02-MAR-2025
DEFINITION  relaxase/mobilization nuclease domain-containing protein
            [Oscillibacter valericigenes].
ACCESSION   WP_235229850
VERSION     WP_235229850.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Meyer,R.
  TITLE     Identification of the mob genes of plasmid pSC101 and
            characterization of a hybrid pSC101-R1162 system for conjugal
            mobilization
  JOURNAL   J Bacteriol 182 (17), 4875-4881 (2000)
   PUBMED   10940031
REFERENCE   2  (residues 1 to 156)
  AUTHORS   Bravo-Angel,A.M., Gloeckler,V., Hohn,B. and Tinland,B.
  TITLE     Bacterial conjugation protein MobA mediates integration of complex
            DNA structures into plant cells
  JOURNAL   J Bacteriol 181 (18), 5758-5765 (1999)
   PUBMED   10482518
REFERENCE   3  (residues 1 to 156)
  AUTHORS   Byrd,D.R. and Matson,S.W.
  TITLE     Nicking by transesterification: the reaction catalysed by a
            relaxase
  JOURNAL   Mol Microbiol 25 (6), 1011-1022 (1997)
   PUBMED   9350859
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015397.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03432.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..156
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /calculated_mol_wt=17629
     Region          23..>140
                     /region_name="Relaxase"
                     /note="Relaxase/mobilization nuclease domain; cl21589"
                     /db_xref="CDD:451322"
ORIGIN      
        1 mstykvagrg eknkffdeaa ynsavnyvld pekavyaggc nissvqlaaq emeetamefg
       61 kengkkvrhs vlsfgenehv tpeqadrfak kiieyyepdy qmvyavhant ddvhihfvmn
      121 hiscadghry qgkkadyygf mnhikqvthf pvipvk
//
LOCUS       WP_235229868              34 aa            linear   BCT 02-MAR-2025
DEFINITION  GGGtGRT protein [Oscillibacter valericigenes].
ACCESSION   WP_235229868
VERSION     WP_235229868.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025423.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14057.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..34
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..34
                     /product="GGGtGRT protein"
                     /calculated_mol_wt=3423
ORIGIN      
        1 mndnngknrh lsmgnnpmvg atvavavava esrk
//
LOCUS       WP_235229862             307 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF932 domain-containing protein [Oscillibacter valericigenes].
ACCESSION   WP_235229862
VERSION     WP_235229862.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017843.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06067.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..307
                     /product="DUF932 domain-containing protein"
                     /calculated_mol_wt=34548
     Region          6..288
                     /region_name="DUF932"
                     /note="Domain of unknown function (DUF932); cl12129"
                     /db_xref="CDD:472280"
ORIGIN      
        1 maanvetmmy vrerpwhglg tevseapnse dalrfagldw svrqenifna rggiikgfka
       61 nvrdsddnvl gvvgdrykvv qnidafkftd dlisgdvrye tagslrdgkq iwllakmqer
      121 kiagdavepy lcftnahdgs sgvrvcmtpi rvvcnntlnv alatakrtws mrhtenvher
      181 lseardclfr aedymdglae yadmaanktl rddeirdiln elfpvtektt erekatiakc
      241 kdefmvcyfa pditkfrgta wgainaisdl vthsmphrnt knyaennwgk vmsghvlmdr
      301 maalcmr
//
LOCUS       WP_235229873             365 aa            linear   BCT 02-MAR-2025
DEFINITION  DHHW family protein [Oscillibacter valericigenes].
ACCESSION   WP_235229873
VERSION     WP_235229873.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 365)
  AUTHORS   Sychantha,D., Little,D.J., Chapman,R.N., Boons,G.J., Robinson,H.,
            Howell,P.L. and Clarke,A.J.
  TITLE     PatB1 is an O-acetyltransferase that decorates secondary cell wall
            polysaccharides
  JOURNAL   Nat Chem Biol 14 (1), 79-85 (2018)
   PUBMED   29083419
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025644.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14286.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..365
                     /product="DHHW family protein"
                     /calculated_mol_wt=40667
     Region          36..324
                     /region_name="DHHW"
                     /note="DHHW protein; pfam14286"
                     /db_xref="CDD:405044"
ORIGIN      
        1 mtkaysrflt affclflagl lvwhvllpdr aqsetenrml aqapefswsa lvsgkytdav
       61 eeyfadqfpl rdgwtglkar meqllgkref ngiylcgdtl iskvetpavg avdknlsyvd
      121 rlagktdanv vlglipsaae iwkekipaga dswdqtalla qsqvdfqsal vahadepify
      181 rtdhhwttlg afygantlle slgeeplked dftpetvsds fngtlysqsg ihwlepdtme
      241 fwveeegltv tslrtgkeel aalydrtyle kkdkyssflg gnqplcvikn eqvtdgskll
      301 lvrdsysdal apflaqrfse vhlldlryyr apvsayaten gigdiavvys vqnfisdvnl
      361 vlltq
//
LOCUS       WP_235229917             277 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3021 family protein [Oscillibacter valericigenes].
ACCESSION   WP_235229917
VERSION     WP_235229917.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022896.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11457.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..277
                     /product="DUF3021 family protein"
                     /calculated_mol_wt=30953
     Region          12..150
                     /region_name="DUF3021"
                     /note="Protein of unknown function (DUF3021); pfam11457"
                     /db_xref="CDD:402870"
ORIGIN      
        1 mterreiihe larraavgfp rgvalvylif llgglfafpa sgsgvsvvta amaerwgnpv
       61 taalvqflws gllgavleta elpfrlerrt alwsgvhfll taavfslagw qcrwfpyret
      121 wlcllgllll cyllmwavry vgwqqdvrai rkgvglpeep erpawqkalp yaflaagvel
      181 llpwllrlvd srdvpvltgi fypflilplf cffsglsltk rcrrlwlvyp vlcgvltlpc
      241 vfllynssal fqvwvaaiaa lvggllgvll rkkrent
//
LOCUS       WP_235229945             109 aa            linear   BCT 02-MAR-2025
DEFINITION  TIM barrel protein, partial [Oscillibacter valericigenes].
ACCESSION   WP_235229945
VERSION     WP_235229945.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 109)
  AUTHORS   Fry,J., Wood,M. and Poole,P.S.
  TITLE     Investigation of myo-inositol catabolism in Rhizobium leguminosarum
            bv. viciae and its effect on nodulation competitiveness
  JOURNAL   Mol Plant Microbe Interact 14 (8), 1016-1025 (2001)
   PUBMED   11497462
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013429.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01261.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         <1..109
                     /product="TIM barrel protein"
     Region          <6..105
                     /region_name="YcjR"
                     /note="Sugar phosphate isomerase/epimerase [Carbohydrate
                     transport and metabolism]; COG1082"
                     /db_xref="CDD:440699"
ORIGIN      
        1 ldqyhfhama sgwdalekad gkkifiwhln gmenmpcgaa ynndekrlwp gepgdcldhk
       61 ryadtlkkig fdgdvctiev frpdyyklsn eeniqkaaqv trahvetyc
//
LOCUS       WP_235230017             147 aa            linear   BCT 02-MAR-2025
DEFINITION  AEC family transporter [Oscillibacter valericigenes].
ACCESSION   WP_235230017
VERSION     WP_235230017.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015509.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03547.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..147
                     /product="AEC family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=15898
     Region          4..>146
                     /region_name="YfdV"
                     /note="Predicted permease, AEC (auxin efflux carrier)
                     family [General function prediction only]; COG0679"
                     /db_xref="CDD:440443"
ORIGIN      
        1 mdffadmlsl qvmlfclmiv gllikkigii seagrktlsg llinvvlpcn ivhsfmsgvq
       61 isgefirnci lmvmlsaaiq laatygskli fhsfpqrqkg vlsygiicsn ssfiglpiae
      121 alfgnlgvmy tpvfqipirf tmwtagg
//
LOCUS       WP_235230019             272 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Oscillibacter
            valericigenes].
ACCESSION   WP_235230019
VERSION     WP_235230019.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..272
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=31588
     Region          7..110
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(8..10,24,41..43)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133389"
ORIGIN      
        1 mkfekkysiq efanmchttk dtlfhyhrmk likpsinesn hyreytsehl ltfhriallk
       61 ksgctleeie dylyhrnant lptileeshv rlnqklleaq ravqqlnrie eaiiyaqtpk
      121 naaphveiwt eprylvttpi deadfiydea ditclcshid ycetiptada fpigntlpnl
      181 slsmelysha ffsfskepfd sdrcqvlepg kylcslhigc ldfiqhsies laqyafdnni
      241 lpignlyvcn lidaftvfdr ndfvtwlfsr ie
//
LOCUS       WP_235230057             216 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF624 domain-containing protein [Oscillibacter valericigenes].
ACCESSION   WP_235230057
VERSION     WP_235230057.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016726.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04854.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..216
                     /product="DUF624 domain-containing protein"
                     /calculated_mol_wt=23521
     Region          44..>159
                     /region_name="DUF624"
                     /note="Protein of unknown function, DUF624; cl02369"
                     /db_xref="CDD:470552"
ORIGIN      
        1 mrrkgslwqs ilgvlgdeap lmtgvgrvml lvilnlclll gmmpvitgga awlalytvll
       61 ewgewnyvaa cgrffrilrq nlkasiipwl vtllavgglt aawrivlerg wtdnfllllp
      121 lllataviai talwlyplma aahmpwlqav paafllglre lwrslallal evllaalaly
      181 caagpltlkg iwlllgitpv ellklrliag klpkae
//
LOCUS       WP_235230086             417 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class III-fold pyridoxal phosphate-dependent
            enzyme [Oscillibacter valericigenes].
ACCESSION   WP_235230086
VERSION     WP_235230086.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 417)
  AUTHORS   Shen,B.W., Hennig,M., Hohenester,E., Jansonius,J.N. and Schirmer,T.
  TITLE     Crystal structure of human recombinant ornithine aminotransferase
  JOURNAL   J Mol Biol 277 (1), 81-102 (1998)
   PUBMED   9514741
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012428.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00202.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..417
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /calculated_mol_wt=46648
     Region          5..413
                     /region_name="HemL"
                     /note="Glutamate-1-semialdehyde aminotransferase [Coenzyme
                     transport and metabolism]; COG0001"
                     /db_xref="CDD:439772"
ORIGIN      
        1 mkindysksr eaylrackvi psgiyghqgp aegcytpiea wpmfssraeg syfwdldgnr
       61 midymcgygp nilgyhdpdv deaarkqral edcvtvpstk midfaellvd tvacadwaff
      121 akngndvttl aimtarayth rkkivffkgy yhgvspwtqk mdyagvleed vmhnlyvdwn
      181 dfdalaelfd qykgeiaavi gqpymhgnfk dnelpadgfw qkvrklctdn gtvlivddvr
      241 agwridlags dhyfgfkadl icfckalang ynvsalcgqd flkntvsgms ytgsywlsav
      301 pfaagiacie kmkkldlprv lnekgkklgd glieagkkyg fdlhvsgmps lfylrladdp
      361 slmlhqewia ecvkrgvfft thhnhfinya lsdadiaeti avaeeafsvv rarhpeg
//
LOCUS       WP_235230089             500 aa            linear   BCT 02-MAR-2025
DEFINITION  VWA domain-containing protein [Oscillibacter valericigenes].
ACCESSION   WP_235230089
VERSION     WP_235230089.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 500)
  AUTHORS   Bork,P. and Rohde,K.
  TITLE     More von Willebrand factor type A domains? Sequence similarities
            with malaria thrombospondin-related anonymous protein,
            dihydropyridine-sensitive calcium channel and inter-alpha-trypsin
            inhibitor
  JOURNAL   Biochem J 279 (Pt 3) (Pt 3), 908-910 (1991)
   PUBMED   1659389
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012321.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00092.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..500
                     /product="VWA domain-containing protein"
                     /calculated_mol_wt=52823
     Region          <44..234
                     /region_name="ChlD"
                     /note="vWFA (von Willebrand factor type A) domain of Mg
                     and Co chelatases [Coenzyme transport and metabolism];
                     COG1240"
                     /db_xref="CDD:440853"
     Region          <450..496
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cd00060"
                     /db_xref="CDD:438714"
ORIGIN      
        1 mrhlkillsl clvmllmpvs ayaagevdvv qtlvqddily lwmdtsalsd pvtqvnaetn
       61 gvilpvagtl qtvaqvdggs yciflldrsg smpkhkqeil dfmdaytatc pddskyalat
      121 fgdefelvad dldgenlaaa ldqvsystqn trlyegtaka ldylakrqrr ggeihslvll
      181 tdgvedapss avtfeellel ageagvllha vgfgddqasl eklqaiaeag ggrcgvpgae
      241 lspaalaeqm taemnllrma afdlsgytgp kgpqsvkltl aagaqllgkt eavanlssgt
      301 gsgmetqtvl pdesseekdh ipptaeerep eappaeealp evnaelqdaa aaekeapavs
      361 giviagalaa aaavvlavvv fikrkkrdqp eqsseapvsl dndpnqgiym rleveqgsyi
      421 gkqtdfglvd ellvglgghi afsqlparsa rifaaegvvy ieplefvqev cvnglpiamp
      481 nllrsgdiit igetrfclkf
//
LOCUS       WP_235230100             187 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Oscillibacter valericigenes].
ACCESSION   WP_235230100
VERSION     WP_235230100.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 187)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 187)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..187
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=21468
     Region          30..179
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(32,46..47,112,114,132,168)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:271192"
     Site            order(46,132,135,159,168)
                     /site_type="active"
                     /db_xref="CDD:271192"
ORIGIN      
        1 mnkktkaltt eqykeiiqam kegfcgcrpn eriatalvle gnlglrisdi vklrlcdivr
       61 dgdryrleiv eqktgksrvf tvplviqqyv enyclrngir rdelmfpite raiqkqlkiv
      121 cdylgfegis thsfrkwyat eiyknngydi alvqrllqhs saavtqryig mepqrieaai
      181 qghaqll
//
LOCUS       WP_235230146             350 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Oscillibacter valericigenes].
ACCESSION   WP_235230146
VERSION     WP_235230146.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..350
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=39483
     Region          <39..326
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mrvqlysgsl alvrksgvgk avehqramle rcgvdvtdrr dagivhcntv fpdswleahw
       61 arlrgrkvvy yghstmedfr nsfrgsnrla plfrwwitrc ynsgsivitp teyarrllls
      121 ygvrvpvyvl sngvdtsffa psqerrmvfr kkyglsdtdr avlsvghmia rkglvefvem
      181 arsmpetrff wfgytapeli pahirqavet appnvtfpgf vspeelrday cgcdvfafls
      241 heetegivvl ealacgiptv lrdipvydgw ltdggqvykg rddrelrdrv egllsgrlps
      301 lasaglktar qrdletvgrr lrriyahagf lecpeprrlg gptaversyi
//
LOCUS       WP_235230197             269 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235230197
VERSION     WP_235230197.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 269)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 269)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..269
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=29972
     Region          94..269
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mhtadkkllf ssllfssllf ssllfssllf ssaaraaged hgrgpyvqad layaaerith
       61 dypkptaqkk dtistvsdyf rnirtrsvhp rvsvgydfgg wriaadyary rkwnnnkysv
      121 ntknvrthpd ngtredlkte nqengsfhaa sslglsaiyd fqindkfkpy igarvayghv
      181 khqvhsvetg ttivtskngg pipeaptrkp ahhesrstrs lgfgavagvg iditpnltld
      241 agyryhnwgr lentrfkthe asvgmryrf
//
LOCUS       WP_235230204             282 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235230204
VERSION     WP_235230204.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 282)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 282)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..282
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=31172
     Region          96..282
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mnparkkpsl lfssllfssl lfssllfssl lfssaaqaas edngrgpyvq adlayayehi
       61 thdypdaaga nkgkistvsd yfrnirthsv hprvsvgydf ggwriaadya ryrkwnnnky
      121 svsikellrn dnsasgvrgh lniqtqkteh qengtfhaas slglstiydf dtgsrfkpyi
      181 garvayghvr hqvrsveqet eivttypkkg apspipgapt kkpahhesrs isslgfgava
      241 gvgiditpnl tldagyryhn wgrlentrfk theaslgvry rf
//
LOCUS       WP_235230210             258 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235230210
VERSION     WP_235230210.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 258)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 258)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..258
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=28635
     Region          86..258
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mnparkkpsl lfssllfssl lfssaaqaas egngrgpyvq adlayaaeri thdypkptgt
       61 dksklstvsd yfrnirthsi hprvsvgydf ggwriaadya ryrkwnnsky svsikelknn
      121 nkkktenqen gsfhavsslg lsavydfkln dkfkpyigar vayghvrhsi stkktteflt
      181 vagarvtvpg tykvsttpga hqesnsirrv glgviagvgf ditpnltlda gyryhnwgrl
      241 entrfkthea slgvryrf
//
LOCUS       WP_235230215             320 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Neisseria gonorrhoeae].
ACCESSION   WP_235230215
VERSION     WP_235230215.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02371.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..320
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=36180
     Region          4..320
                     /region_name="COG3547"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442768"
ORIGIN      
        1 mrntvgldis kltfdataiv gnaeysakfd ndskglnqfs drlkslgcqn lhicmeatgn
       61 yyeevadyfa qyysvyvvnp lkiskyaesr fkrtktgkqd akliaqycrs aqeselvkrq
      121 kptdeqyrll rmtaayaqik secaemknry haakdeeaak ayaeiikamn eqlevlkeki
      181 keqtekpkck egvkcletip gigrmtaavl fhhltsskfe tsnkfaafag lspqqkesgt
      241 svrgkgkltk fgnrklravl fmpamvayri rafpdfikrl eekkkpkkvi iaalmrklav
      301 iayhvhkkgg dydpsryksa
//
LOCUS       WP_235230245             258 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235230245
VERSION     WP_235230245.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 258)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 258)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..258
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=28636
     Region          86..258
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mnparkkpsl lfssllfssl lfssaaqaas edggrgpyvq adlayaaeri thdypkptgt
       61 dksklstvsd yfrnirthsi hprvsvgydf ggwriaadya ryrkwnnsky svsikelknn
      121 nkkktenqen gsfhavsslg lsavydfkln dkfkpyigar vayghvrhsi stkktteflt
      181 vagarvtvpg tykvsttpga hqesnsirrv glgviagvgf ditpnltlda gyryhnwgrl
      241 entrfkthea slgvryrf
//
LOCUS       WP_235230263             262 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235230263
VERSION     WP_235230263.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 262)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 262)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..262
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=29203
     Region          86..262
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 melicirptk nfssllfssl lfssaaraag edhgrgpyvq adlayaaeri thdypkptaq
       61 kkdtistvsd yfrnirtrsv hprvsvgydf ggwriaadya ryrkwkesns stkkvtedik
      121 dnyretkteh qgngsfhaas slglsavydf klndkfkpyi garvgyghvr hqvrsvgqet
      181 itvtpkpkng tqggpvists pvpayhenrs srrlgfgama gvgidvapgl tldagyryhy
      241 wgrlentrfk theaslgvry rf
//
LOCUS       WP_235230320             435 aa            linear   BCT 02-MAR-2025
DEFINITION  YadA-like family protein [Neisseria gonorrhoeae].
ACCESSION   WP_235230320
VERSION     WP_235230320.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 435)
  AUTHORS   Sandt,C.H. and Hill,C.W.
  TITLE     Nonimmune binding of human immunoglobulin A (IgA) and IgG Fc by
            distinct sequence segments of the EibF cell surface protein of
            Escherichia coli
  JOURNAL   Infect Immun 69 (12), 7293-7303 (2001)
   PUBMED   11705900
REFERENCE   2  (residues 1 to 435)
  AUTHORS   Hoiczyk,E., Roggenkamp,A., Reichenbecher,M., Lupas,A. and
            Heesemann,J.
  TITLE     Structure and sequence analysis of Yersinia YadA and Moraxella
            UspAs reveal a novel class of adhesins
  JOURNAL   EMBO J 19 (22), 5989-5999 (2000)
   PUBMED   11080146
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015831.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03895.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..435
                     /product="YadA-like family protein"
                     /calculated_mol_wt=45210
     Region          21..190
                     /region_name="LbR_YadA-like"
                     /note="YadA-like, left-handed beta-roll; cd12820"
                     /db_xref="CDD:240612"
     Site            order(21,23,26..27,35,40..41,49,51,53..55,63,97,99..101,
                     109,111,113..115,136,138,140..142,150,152,154..156,164,
                     166,168..169,173,175..176,179..184,188)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:240612"
     Region          136..263
                     /region_name="LbR_YadA-like"
                     /note="YadA-like, left-handed beta-roll; cd12820"
                     /db_xref="CDD:240612"
     Site            order(136,138,141..142,150,155..156,164,166,168..170,178,
                     180,182..184,192,194,196..198,206,208,210..212,220,222,
                     224..226,234,236,238..239,243,245..246,251..256,260)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:240612"
     Region          337..394
                     /region_name="YadA_anchor"
                     /note="YadA-like membrane anchor domain; pfam03895"
                     /db_xref="CDD:427576"
ORIGIN      
        1 mcylhisrvt ylpiwyrpkk yavalgssst asgeysyasg ynsvasgnks yaagyafvas
       61 aegsivigds rqvkpeadqg vavgskatvk nkakqrvvvg seakvnaerg iaigkeakag
      121 gkttntlldg payyadaiav gyqaeagkgg aialgkqaka tkqngmalgv eseaagdfst
      181 avgneskakg qggvglgnqs kaeadfavav gnkaeatken slvigryara ngnhsvslgs
      241 rseikdgvsn svapgygsva sennvvsvay ketpqstels yrkivgvddg vnnfdavnvr
      301 qskamqgqnm aelfsvrsev rgvaassaal saltplsyda nnptqfmvgf gtykgrqama
      361 lglshfvndr fmvkvggtlg gnktghmmnv gltwkfgtsq gvpatsdkvl meqlmqdnrq
      421 lkarleklea rlnam
//
LOCUS       WP_235230281             228 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235230281
VERSION     WP_235230281.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 228)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 228)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..228
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=25692
     Region          49..228
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaae rithdypeat aqkkgttist vsdyfrnirt hsvhprvsvg ydfggwriaa
       61 dyaryrkwnn skysvntkev lrnedngnrt drktenqeng tfhavsslgl savydfklnd
      121 kfkpyigarv ayghvrhsid stkkttevtt ilhgpgttpt vypgkntqda hresdsirrv
      181 glgviagvgf ditpnltlda gyryhnwgrl entrfkthea slgvryrf
//
LOCUS       WP_235230338              87 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Neisseria gonorrhoeae].
ACCESSION   WP_235230338
VERSION     WP_235230338.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02371.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         <1..>87
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <1..>85
                     /region_name="COG3547"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442768"
ORIGIN      
        1 akayaqiika mneqlevlke kikeqtekpn ckegvkrlet ipgigrmtaa vlfhhltssk
       61 fetsnkfaaf aglspqqkes gtsvrgk
//
LOCUS       WP_235230361             253 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2314 domain-containing protein [Neisseria gonorrhoeae].
ACCESSION   WP_235230361
VERSION     WP_235230361.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021584.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10077.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..253
                     /product="DUF2314 domain-containing protein"
                     /calculated_mol_wt=29015
     Region          14..145
                     /region_name="DUF2314"
                     /note="Uncharacterized protein conserved in bacteria
                     (DUF2314); pfam10077"
                     /db_xref="CDD:431035"
     Region          <193..250
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          196..227
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
ORIGIN      
        1 mmgdsviyyv eqadepvnra gerarktfky fwrelfwerr riisaldfam vkvpffqdge
       61 dgeicehmwi ddiyfdglyi ygvlnnepgg ltnveqgesv cvpvgdisdw mfvcngipyg
      121 gftvqamrgq mteeertehd tawgidfgdp gqilpvyeek ehpenleehp mcwnciddfr
      181 qqlsqnpdfl heqdedgytp fhheamagna lmvqamleyg anpasktseg ytaldfarlt
      241 gwqnvadlle prh
//
LOCUS       WP_235230363             226 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235230363
VERSION     WP_235230363.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 226)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 226)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..226
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=25303
     Region          48..226
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaae rithdypkpt gtgknkistv sdyfrnirth sihprvsvgy dfggwriaad
       61 yaryrkwkes nssikkvted inhnhretqt khqgngsfha asslglsaiy dfklndkfkp
      121 yigvrvaygh vrhqvhsves entivtskqt qsakrggpve tgftaklphh esrsisslgf
      181 gavagvgidi tpnltldagy ryhnwgrlen trfktheasl gvryrf
//
LOCUS       WP_235230384             228 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235230384
VERSION     WP_235230384.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 228)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 228)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..228
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=25669
     Region          48..228
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaae rithdypepa gakkgkistv sdyfrnirth svhprvsvgy dfggwriaad
       61 yaryrkwndn kysvdikele nknknkrdlk tenqengsfh avsslglsti ydfdtgsrfk
      121 pyigmrvayg hvrhqvrsvq qetvavttyp kkgeqgapsv ttnaptrklp hhesrsissl
      181 gfgavagvgi ditpnltlda gyryhnwgrl entrfkthea slgvryrf
//
LOCUS       WP_235230412             299 aa            linear   BCT 02-MAR-2025
DEFINITION  replication protein [Neisseria gonorrhoeae].
ACCESSION   WP_235230412
VERSION     WP_235230412.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 299)
  AUTHORS   Zylicz,M., Gorska,I., Taylor,K. and Georgopoulos,C.
  TITLE     Bacteriophage lambda replication proteins: formation of a mixed
            oligomer and binding to the origin of lambda DNA
  JOURNAL   Mol Gen Genet 196 (3), 401-406 (1984)
   PUBMED   6239082
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016381.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04492.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..299
                     /product="replication protein"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /calculated_mol_wt=31880
     Region          <21..95
                     /region_name="Phage_rep_O"
                     /note="Bacteriophage replication protein O; cl04545"
                     /db_xref="CDD:471049"
ORIGIN      
        1 mkyipnsfqi anavvddflc rmsgnawkcy avivrkttgw qkeidyisvs qfknltgikt
       61 dvtvadalke lvelnliasv krhgqvtgyr inmpepspen ggtpppengg tatpknwvhp
      121 kngttpknwg vlppenggtt tpknwgstkh ttkptntkhs isasaaadap lsaeppesgk
      181 rapaakakkt grhetelsll adygitgqva adflqvrkak rqpltetamr liaadaekcg
      241 mtalqaaeya iasgwgsfra dwlqnktfgg sgnrgglthn qtaavpdags ygdmpttdf
//
LOCUS       WP_235230424             529 aa            linear   BCT 02-MAR-2025
DEFINITION  IgG-binding virulence factor TspB family protein [Neisseria
            gonorrhoeae].
ACCESSION   WP_235230424
VERSION     WP_235230424.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 529)
  AUTHORS   Muller,M.G., Moe,N.E., Richards,P.Q. and Moe,G.R.
  TITLE     Resistance of Neisseria meningitidis to human serum depends on T
            and B cell stimulating protein B
  JOURNAL   Infect Immun 83 (4), 1257-1264 (2015)
   PUBMED   25583528
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05616.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..529
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /calculated_mol_wt=58593
     Region          46..521
                     /region_name="Neisseria_TspB"
                     /note="Neisseria meningitidis TspB protein; pfam05616"
                     /db_xref="CDD:283306"
ORIGIN      
        1 mnsfikstpi vlililcssn sysepvrlek sqikfqssnn lksigfklds ssnsfskfte
       61 aanfehiptg akarinakit asvsragvls gvgklvrqga kfgtravpyv gtallahdvy
      121 qtfkediqar gcrydpetdk fvkgyeyanc lwyederrin rtygcygvds simrlmpdrs
      181 rfpevqqlmk sqmyrlarpf wnwrkeelnk lssldwnnfv lnrctfdwng ggcavnkgdd
      241 fragasfsle rnpkykeemd akkpeeilsl kvdadpdkyi katgypgyse kvevapgtkv
      301 nmgpvtdrng npvqvaatfg rdsqgnttad vqviprpdlt pgsseaphaq plpevspaen
      361 pannpdpden pgtrpnpepd pdlnpdanpd tdgqpgtspd spavpdrpng rhrkarkege
      421 dgglscdyfp eilacqemgk psdrmfhdis ipqvtddktw sshnflpsng vcpqpktfhv
      481 fgrqyrasye plcvfaekir favllafiim safvvfgslg gnkchylpa
//
LOCUS       WP_235230440              68 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1132 family protein, partial [Neisseria gonorrhoeae].
ACCESSION   WP_235230440
VERSION     WP_235230440.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018300.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06575.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..>68
                     /product="DUF1132 family protein"
     Region          11..>68
                     /region_name="DUF1132"
                     /note="Protein of unknown function (DUF1132); pfam06575"
                     /db_xref="CDD:284087"
ORIGIN      
        1 mnkpfitqaq lalykyqpss eyfgqsmafi aqkefeefvn nvkeydiles fsyflnkrva
       61 hniwkiyf
//
LOCUS       WP_235230451             498 aa            linear   BCT 02-MAR-2025
DEFINITION  MafB family polymorphic toxin [Neisseria gonorrhoeae].
ACCESSION   WP_235230451
VERSION     WP_235230451.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 498)
  AUTHORS   Jamet,A., Jousset,A.B., Euphrasie,D., Mukorako,P., Boucharlat,A.,
            Ducousso,A., Charbit,A. and Nassif,X.
  TITLE     A new family of secreted toxins in pathogenic Neisseria species
  JOURNAL   PLoS Pathog 11 (1), e1004592 (2015)
   PUBMED   25569427
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018014.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06255.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..498
                     /product="MafB family polymorphic toxin"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI."
                     /calculated_mol_wt=53696
     Region          30..352
                     /region_name="MafB"
                     /note="Neisseria toxin MafB; pfam06255"
                     /db_xref="CDD:283833"
ORIGIN      
        1 mnlpiqkfmm lfaaaisllq ipishangld arlrddmqak hyepggkyhl fgnargsvkn
       61 rvcavqtfda tavgpilpit hertgfegii gyethfsghg hevhspfdnh dskstsdfsg
      121 gvdggftvyq lhrtgseihp adgydgpqgg gypepqgard iysyhikgts tktkintvpq
      181 apfsdrwlke nagaasgfls radeagkliw endpdknwra nrmddvrgii qgavnpfltg
      241 fqgvgigait dsavspvtdt aaqqtlqgin dlgklspeaq laaasllqds afavkdgins
      301 arqwadahpn itataqtala vaeaagtvwg gkkvelnpak wdwvkntgye kpaarhmqtv
      361 dgemaggnrp pksitsegka naatypklvn qlneqnlnni aaqdprlsla ihegkknfpi
      421 gtatyeeadr lgkiwvgega rqtsgggwls rdgtrqyrpp tekksqfatt giqanfetyt
      481 idsnekrnki knghlnir
//
LOCUS       WP_235230035             169 aa            linear   BCT 02-MAR-2025
DEFINITION  QueT transporter family protein [Oscillibacter valericigenes].
ACCESSION   WP_235230035
VERSION     WP_235230035.1
KEYWORDS    RefSeq.
SOURCE      Oscillibacter valericigenes
  ORGANISM  Oscillibacter valericigenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Oscillibacter.
REFERENCE   1  (residues 1 to 169)
  AUTHORS   Meyer,M.M., Roth,A., Chervin,S.M., Garcia,G.A. and Breaker,R.R.
  TITLE     Confirmation of a second natural preQ1 aptamer class in
            Streptococcaceae bacteria
  JOURNAL   RNA 14 (4), 685-695 (2008)
   PUBMED   18305186
REFERENCE   2  (residues 1 to 169)
  AUTHORS   Roth,A., Winkler,W.C., Regulski,E.E., Lee,B.W., Lim,J., Jona,I.,
            Barrick,J.E., Ritwik,A., Kim,J.N., Welz,R., Iwata-Reuyl,D. and
            Breaker,R.R.
  TITLE     A riboswitch selective for the queuosine precursor preQ1 contains
            an unusually small aptamer domain
  JOURNAL   Nat Struct Mol Biol 14 (4), 308-317 (2007)
   PUBMED   17384645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017941.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06177.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Oscillibacter valericigenes"
                     /db_xref="taxon:351091"
     Protein         1..169
                     /product="QueT transporter family protein"
                     /calculated_mol_wt=17876
     Region          3..148
                     /region_name="QueT"
                     /note="ECF-type transporter of queuosine precursor,
                     membrane (S) component [Nucleotide transport and
                     metabolism, Translation, ribosomal structure and
                     biogenesis]; COG4708"
                     /db_xref="CDD:443743"
ORIGIN      
        1 msksrfttrq vatagiiaav yavmslcasv fgiaygpvqc rfsealtvlp fflpeaipgl
       61 figclvtnlm stvgpldiif gslatliaai wtrkmpnkwl aplppvicna viigamiawy
      121 evgftgafwg afafnaftvg lgeaiacyvl gllllqvlsr ssllrghqa
//
LOCUS       WP_235230487             110 aa            linear   BCT 02-MAR-2025
DEFINITION  plasmid mobilization protein, partial [Neisseria gonorrhoeae].
ACCESSION   WP_235230487
VERSION     WP_235230487.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 110)
  AUTHORS   Rehman,S., Li,Y.G., Schmitt,A., Lassinantti,L., Christie,P.J. and
            Berntsson,R.P.
  TITLE     Enterococcal PcfF Is a Ribbon-Helix-Helix Protein That Recruits the
            Relaxase PcfG Through Binding and Bending of the oriT Sequence
  JOURNAL   Front Microbiol 10, 958 (2019)
   PUBMED   31134011
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046164.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21983.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..>110
                     /product="plasmid mobilization protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
     Region          5..110
                     /region_name="PRK13877"
                     /note="conjugal transfer transcriptional regulator TraJ"
                     /db_xref="CDD:184361"
ORIGIN      
        1 magarkrpky isvyvseeew ktieslaksv glsqsaylkl lglgykpasv ydgeavkala
       61 kinadqgrlg glikmwland erlmmfdhdq lakaifgvle qigemqesml
//
LOCUS       WP_235230511             288 aa            linear   BCT 02-MAR-2025
DEFINITION  replication protein [Neisseria gonorrhoeae].
ACCESSION   WP_235230511
VERSION     WP_235230511.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 288)
  AUTHORS   Zylicz,M., Gorska,I., Taylor,K. and Georgopoulos,C.
  TITLE     Bacteriophage lambda replication proteins: formation of a mixed
            oligomer and binding to the origin of lambda DNA
  JOURNAL   Mol Gen Genet 196 (3), 401-406 (1984)
   PUBMED   6239082
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016381.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04492.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..288
                     /product="replication protein"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /calculated_mol_wt=30916
     Region          <21..95
                     /region_name="Phage_rep_O"
                     /note="Bacteriophage replication protein O; cl04545"
                     /db_xref="CDD:471049"
ORIGIN      
        1 mkyipnsfqi anavvddflc rmsgnawkcy avivrkttgw qkeidyisvs qfknltgikt
       61 dvtvadalke lvelnliasv krhgqvtgyr inmpepspen ggtatpknwv hpkngttpkn
      121 wgvlppengg tttpknwgst khttkptntk hsisasaaad aplsaeppet apaakakktg
      181 rhetelslla dygitgqaae dflqvrkakr qpltetamrl iaadaekcgm talqaaeyai
      241 asgwgsfrad wlqnktfgrs gnrggpthnq taavpdagsy gdmpttdf
//
LOCUS       WP_235230352             103 aa            linear   BCT 02-MAR-2025
DEFINITION  type II toxin-antitoxin system PrlF family antitoxin [Neisseria
            gonorrhoeae].
ACCESSION   WP_235230352
VERSION     WP_235230352.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 103)
  AUTHORS   Schmidt,O., Schuenemann,V.J., Hand,N.J., Silhavy,T.J., Martin,J.,
            Lupas,A.N. and Djuranovic,S.
  TITLE     prlF and yhaV encode a new toxin-antitoxin system in Escherichia
            coli
  JOURNAL   J Mol Biol 372 (4), 894-905 (2007)
   PUBMED   17706670
REFERENCE   2  (residues 1 to 103)
  AUTHORS   Kiino,D.R., Phillips,G.J. and Silhavy,T.J.
  TITLE     Increased expression of the bifunctional protein PrlF suppresses
            overproduction lethality associated with exported
            beta-galactosidase hybrid proteins in Escherichia coli
  JOURNAL   J Bacteriol 172 (1), 185-192 (1990)
   PUBMED   2152898
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027267.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15937.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..103
                     /product="type II toxin-antitoxin system PrlF family
                     antitoxin"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0097351 - toxin sequestering activity
                     [Evidence IEA]"
                     /GO_process="GO:0001558 - regulation of cell growth
                     [Evidence IEA]"
                     /calculated_mol_wt=11726
     Region          1..100
                     /region_name="MazE_antitoxin"
                     /note="Antidote-toxin recognition MazE, bacterial
                     antitoxin; cl00877"
                     /db_xref="CDD:469969"
ORIGIN      
        1 mkiifdavst mtsknqttip esvrkalgle kqdkirfsvl gggqvllekn nteeeefehd
       61 pvvgkflhfl ensmtkdpns ikptsqsrfn rlrqltwetd mkd
//
LOCUS       WP_235230529             253 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2314 domain-containing protein [Neisseria gonorrhoeae].
ACCESSION   WP_235230529
VERSION     WP_235230529.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021584.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10077.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..253
                     /product="DUF2314 domain-containing protein"
                     /calculated_mol_wt=28936
     Region          14..145
                     /region_name="DUF2314"
                     /note="Uncharacterized protein conserved in bacteria
                     (DUF2314); pfam10077"
                     /db_xref="CDD:431035"
     Region          <193..250
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          196..227
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
ORIGIN      
        1 mmgdsviyyv kqadepvnra gerarktfky fwrelfwerr riisaldfam vkvpffqdge
       61 dgeicehmwi ddiyfdglyi ygvlnnepgg ltnveqgesv cvpvgdisdw mfvcngipyg
      121 gftvqamrgq mteeertehd tawgidfgdp gqvlpvyeek ehpenleehp mcrnciddfr
      181 qqlsqnpdfl heqdedgytp lhheamagna lmvqamleyg anpasktseg ytaldfarlt
      241 gwqnvadlle prh
//
LOCUS       WP_235230516            1014 aa            linear   BCT 02-MAR-2025
DEFINITION  tape measure protein [Neisseria gonorrhoeae].
ACCESSION   WP_235230516
VERSION     WP_235230516.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040129.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20155.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..1014
                     /product="tape measure protein"
                     /calculated_mol_wt=108196
     Region          <34..508
                     /region_name="COG5412"
                     /note="Phage-related protein [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:444167"
     Region          109..298
                     /region_name="TMP_3"
                     /note="Tape measure protein; pfam20155"
                     /db_xref="CDD:466312"
     Region          <617..>801
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
ORIGIN      
        1 msdleakvri tvenhtkqgf dsaaadadka aekmrssgdn aakgfkaaid smhetmrnlh
       61 advkagfeaa gnqaqqasek vraevgkigs glsgltklla glatadfaks vldtadamqs
      121 insqvrqvts seteylavqq qlldtanrtr tslestanly vstsralkdy gytqqeilkf
      181 teatnnamti ggvgaqqraa allqlsqalg sgvlqgdefk sisetapill dtiaeymgks
      241 rdeikklgse gkltadvifk aisgasekfg eqaakmpvtm gqaltvfsnn wqsmvsklln
      301 dsgtmsgiaa vikliadnln lvvpivagfa vavaaavapt lalnlallan pfgiiavaig
      361 tvvgliakfg deidvfgggw snlsdvirav wqiitetvge avgtvkswfd gltgrlnega
      421 ggwpslfgrv msvissaiga yvnvyinifa tgwmlikeaa ndmpqffanl gkaignvfis
      481 aierminkav gminsmidfa nkaasmagis gigklnkvrm grmddgglge rihdsltkdr
      541 agamanavre raadiheada lkgrggggha ktarkkpgan qgggkggksr sggpgaakdp
      601 mqawegeika rklahremqr etlthqewdl areaeywrak latvdangkt gvkirekilt
      661 ledqlskqst eakmnqaaew ekldkhklem ekdaadqala dgrisqlerl dleiefenrr
      721 yqiaydalqe rialaeqdpa ysqaaigklk aqmgelgrgh ertqaknegk renqrrkdap
      781 nvmemlqdgg rnvwqeaqqq mgqaftamla raqnfrqamn gffksmgqtf iqemvtkplt
      841 glmrrmvees aiykmifgtk etletaaaak taatkatett avvssnavqa asgaaasqah
      901 ipyvgpilav aamaammsav mglmggggsq ttttttrips aaggwdipag inpltqlhen
      961 emvlpaehaq tiremadqqg ggstviinst ggdfihkndl akllkqmkrd fkfv
//
LOCUS       WP_235230531             234 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235230531
VERSION     WP_235230531.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 234)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 234)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..234
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=26292
     Region          48..234
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaye hithdypept apnknkistv sdyfrnirth sihprvsvgy dfggwriaad
       61 yaryrkwnnn kysvnikelg rngnensggk lniqtqkteh qengtfhaas slglstiydf
      121 dtgsrfkpyi gmrvayghvr hqvrsvqqet vavttypkeq dakpsvttga ptkkpahhes
      181 rsisslgfga vagvgiditp kltldagyry hnwgrlentr fktheaslgv ryrf
//
LOCUS       WP_235230573             416 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramoyl-L-alanine amidase [Neisseria gonorrhoeae].
ACCESSION   WP_235230573
VERSION     WP_235230573.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 416)
  AUTHORS   Kuroda,A., Sugimoto,Y., Funahashi,T. and Sekiguchi,J.
  TITLE     Genetic structure, isolation and characterization of a Bacillus
            licheniformis cell wall hydrolase
  JOURNAL   Mol Gen Genet 234 (1), 129-137 (1992)
   PUBMED   1495475
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013670.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01520.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..416
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /EC_number="3.5.1.28"
                     /GO_function="GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=44974
     Region          4..407
                     /region_name="amidase_AmiC"
                     /note="N-acetylmuramoyl-L-alanine amidase AmiC; NF038267"
                     /db_xref="CDD:468440"
ORIGIN      
        1 mtkltrrqii rrtagtlfal spiasavakt vrapqftaar iwpshtytrl tlestaalky
       61 qhfaldnpgr lvvdiqnani ntvlhglsqk vmaddpfirs iragqntptt vrlvidlkqp
      121 thaqvfalpp vggfkdrlvv dlyphgmdad dpmmallngs lnktlrgspe adpaqnttpr
      181 pgrgkngrkp vimldpghgg edpgavspgg lqekhvvlsi aretkkqlea lgynvfmtrn
      241 edvfiplgvr vakgrarrad vfvsihadaf tspsargtgv ymlntkgats saakfleqtq
      301 nnadavggvp tsgnrnvdta lldmtqtatl rdsrklgklv leelgrlnhl hkgrvdeanf
      361 avlrapdmps ilvetaflsn paeekllgse sfrrqcaqsi asgvqryint svlkrg
//
LOCUS       WP_235230807             260 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Neisseria gonorrhoeae].
ACCESSION   WP_235230807
VERSION     WP_235230807.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 260)
  AUTHORS   Yeo,C.C. and Poh,C.L.
  TITLE     Characterization of IS1474, an insertion sequence of the IS21
            family isolated from Pseudomonas alcaligenes NCIB 9867
  JOURNAL   FEMS Microbiol Lett 149 (2), 257-263 (1997)
   PUBMED   9141667
REFERENCE   2  (residues 1 to 260)
  AUTHORS   Solinas,F., Marconi,A.M., Ruzzi,M. and Zennaro,E.
  TITLE     Characterization and sequence of a novel insertion sequence,
            IS1162, from Pseudomonas fluorescens
  JOURNAL   Gene 155 (1), 77-82 (1995)
   PUBMED   7698671
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01695.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..260
                     /product="ATP-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=27762
     Region          <72..259
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            129..136
                     /site_type="other"
                     /note="Walker A motif"
                     /db_xref="CDD:99707"
     Site            order(130..137,191,224)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:99707"
     Site            187..192
                     /site_type="other"
                     /note="Walker B motif"
                     /db_xref="CDD:99707"
     Site            238
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:99707"
ORIGIN      
        1 malrnasdfl gaygggvrve rrqcaehggy aaksvlrgvw tgcpacrkle aademaayae
       61 tlrcgamrda lekrigrsgi aprfrncrie nyavsdsipg marakaaaae yaanfadvlq
      121 tgrsmifsgr rgtgknhlac giareviaag ksalvitvgd mlrtvkdsfg ggggeagavg
      181 ifvkpdllvl defgagslse tdgrilfsvv naryerlmpm lvltnltaea frentdarir
      241 drlrdgggkl ipfdwesyra
//
LOCUS       WP_235230809             277 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235230809
VERSION     WP_235230809.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 277)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 277)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..277
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=30866
     Region          98..277
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqpaknllfs sllfssllfs sllfssllfs sllfssaaqa agedngrgpy vqadlayaae
       61 rithdypept gakkdkistv sdyfrnirth svhprvsvgy dfggwriaad yaryrkwnnn
      121 kysvsikell rnkgngnrtd qktenqengt fhavsslgls avydfdtgsr fkpyigarva
      181 yghvrhsids tkkttevtti lhgpdttptv ypgkktqnah hqsnsirrvg lgviagvgfd
      241 itpkltldag yryhnwgrle ntrfktheas lgmryrf
//
LOCUS       WP_235230810             285 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235230810
VERSION     WP_235230810.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 285)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 285)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..285
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=32144
     Region          95..285
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mhtvdkkllf ssllfssllf ssllfssllf ssaaqaased ggrgpyvqad layaaerith
       61 dypeptganq gkkistvsdy frnirthsvh prvsvgydfg gwriaadyar yrkwhnnkys
      121 vnikelerkn nktsggdqln ikyqktehqe ngtfhavssl glstvydfrv ndkfkpyigv
      181 rvgyghvrhs idstkkaknt ltvypsaada apthydnvdl genqkntyrq nrsirrvglg
      241 viagigfdit pnltldtgyr yhnwgrlent rfktheaslg mryrf
//
LOCUS       WP_235230829             264 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235230829
VERSION     WP_235230829.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 264)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 264)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..264
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=29082
     Region          91..264
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mnparkkpsl lfssllfssl lfssllfssa aqaasegngr gpyvqadlay aaerithdyp
       61 kptgtdkskl stvsdyfrni rthsvhprvs vgydfggwri aadyaryrkw nnskysvsik
      121 elknnnkkkt enqengsfha vsslglsavy dsklndkfkp yigarvaygh vrhsidstkk
      181 ttgflttaga rgavpgtykv sttpgahqes nsirrvglgv iagvgfditp nltldagyry
      241 hnwgrlentr fktheaslgv ryrf
//
LOCUS       WP_235230836             144 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein [Neisseria gonorrhoeae].
ACCESSION   WP_235230836
VERSION     WP_235230836.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 144)
  AUTHORS   Aravind,L., Leipe,D.D. and Koonin,E.V.
  TITLE     Toprim--a conserved catalytic domain in type IA and II
            topoisomerases, DnaG-type primases, OLD family nucleases and RecR
            proteins
  JOURNAL   Nucleic Acids Res 26 (18), 4205-4213 (1998)
   PUBMED   9722641
REFERENCE   2  (residues 1 to 144)
  AUTHORS   Szafranski,P., Smith,C.L. and Cantor,C.R.
  TITLE     Cloning and analysis of the dnaG gene encoding Pseudomonas putida
            DNA primase
  JOURNAL   Biochim Biophys Acta 1352 (3), 243-248 (1997)
   PUBMED   9224947
REFERENCE   3  (residues 1 to 144)
  AUTHORS   Bergerat,A., de Massy,B., Gadelle,D., Varoutas,P.C., Nicolas,A. and
            Forterre,P.
  TITLE     An atypical topoisomerase II from Archaea with implications for
            meiotic recombination
  JOURNAL   Nature 386 (6623), 414-417 (1997)
   PUBMED   9121560
REFERENCE   4  (residues 1 to 144)
  AUTHORS   Versalovic,J. and Lupski,J.R.
  TITLE     The Haemophilus influenzae dnaG sequence and conserved bacterial
            primase motifs
  JOURNAL   Gene 136 (1-2), 281-286 (1993)
   PUBMED   8294018
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013878.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01751.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..144
                     /product="toprim domain-containing protein"
                     /calculated_mol_wt=15975
     Region          1..>140
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 mrlflcekps qakdigkvlg vlggrhdgyf qngdtivtwa fghiltqaap daygeqyadf
       61 gnisalpilp evwqmqvppk vskqfkviks llakadevvi atdadregev iareildycg
      121 yrkkisrfwt sgldtqsvkk pylq
//
LOCUS       WP_235230840             224 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235230840
VERSION     WP_235230840.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 224)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..224
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=25022
     Region          49..224
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaae rithdypeat aqkkgttist vsdyfrnirt hsvhprvsvg ydfggwriaa
       61 dyaryrkwnn skysvsikkl qnqynkkten qengtfhaas slglsavydf klndkfkpyi
      121 garvayghvr hsidstkktt gflttagarg aaaptvsspy kntqdahqes nsirrvglgv
      181 iagvgfditp nltldagyry hnwgrlentr fktheaslgv ryrf
//
LOCUS       WP_235230864             543 aa            linear   BCT 02-MAR-2025
DEFINITION  P-loop NTPase fold protein [Streptococcus mitis].
ACCESSION   WP_235230864
VERSION     WP_235230864.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus mitis
  ORGANISM  Streptococcus mitis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus; Streptococcus mitis group.
REFERENCE   1  (residues 1 to 543)
  AUTHORS   Aravind,L., Iyer,L.M., Leipe,D.D. and Koonin,E.V.
  TITLE     A novel family of P-loop NTPases with an unusual phyletic
            distribution and transmembrane segments inserted within the NTPase
            domain
  JOURNAL   Genome Biol 5 (5), R30 (2004)
   PUBMED   15128444
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019313.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07693.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Streptococcus mitis"
                     /db_xref="taxon:28037"
     Protein         1..543
                     /product="P-loop NTPase fold protein"
                     /calculated_mol_wt=64545
ORIGIN      
        1 mkrpswssnv riiewykifi asiwvlylal eieqfkrfas piykfvsnyn rlkdiilily
       61 enrviillvl tiptildiif kkvsykkvsy kkldpelfpe ydlddypfqt hlveflnspd
      121 sihnvywldg swgsgktffi ktffenqiyk kkeiyyiscf giktreqaek ilineiekqs
      181 tlgnldfipl vggvfkwffk tvgtdlmkrn siiifddfer vsyaetsdkp sdyndllgyi
      241 dylsenkrfk iivilnseei kstkknlidn kfklnqnrml steevidsil rksklkdsnl
      301 gqilaliyki yyadrderai qiknkdskve kqslrafqkd iedlsylsdp eeirkyvidc
      361 mngrgrdest ikslfkyfee ipflsdsfly feffifregt eltpkndyid syksfqfask
      421 kisyfddlls clwlegkrdk efrylgissd stysiiknys pseieeilvn iyydilegne
      481 kkdyqiddid ellcneeyqy flnyrlptkl nqqitinhip ldeliqesfe inrslselqa
      541 kfq
//
LOCUS       WP_235230883             233 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235230883
VERSION     WP_235230883.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 233)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 233)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..233
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=26237
     Region          48..233
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaye hitrdypdaa gankgkistv sdyfrnirth sihprvsvgy dfggwriaad
       61 yaryrkwsds kysvnikelg rndnknsgnh lniktqkteh qengtfhavs slglstiydf
      121 dtgsrfkpyi gmrvayghvr hqvrsveqet eiittypsdg ggkvslpskm ppkpahhqsn
      181 sirrvglgvi agvgfditpn ltldagyryh nwgrlentrf ktheaslgvr yrf
//
LOCUS       WP_235230887             232 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235230887
VERSION     WP_235230887.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 232)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 232)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..232
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=26365
     Region          49..232
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaae rithdypeat aqkkgttist vsdyfrnirt hsvhprvsvg ydfggwriaa
       61 dyaryrkwnn skysvntrnl rthesngnrq dlktenqeng sfhaasslgl savydfrvnd
      121 kfkpyigvrv gyghvrhgid stkktkntlt ayhgvgrgst yydnvdpekn qkntyrqnrs
      181 srrlgfgama gvgidvapgl tldagyryhy wgrlentrfk theaslgmry rf
//
LOCUS       WP_235230915             263 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235230915
VERSION     WP_235230915.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 263)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 263)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..263
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=29127
     Region          91..263
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mnparkkpsl lfssllfssl lfssllfssa aqaasegngr gpyvqadlay aaeritrdyp
       61 eptgakkgti stvsdyfrni rthsihprvs vgydfgswri aadyaryrkw nnskysvsik
      121 elknnkkkkt enqengsfha vsslglsavy dfklndkfkp yigarvaygh vrhsistkkt
      181 teflttagrp gvvpggykvs ttpgahqesn sirrvglgvi agvgfditpk ltldagyryh
      241 nwgrlentrf ktheaslgvr yrf
//
LOCUS       WP_235230928             280 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235230928
VERSION     WP_235230928.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 280)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 280)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..280
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=31079
     Region          97..280
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mnparkkpsl lfssllfssl lfssllfssl lfssaaqaas egngrgpyvq adlayaaeri
       61 thdypeptga kkdkkistvs dyfrnirths vhprvsvgyd fgswriaady aryrkwnnsk
      121 ysvnikrvke nngsgkkltq dlktenqeng tfhavsslgl savydfdtgs rfkpyagvrv
      181 syghvrhsid stkkttdvit appttsdgap ttynanpqtq npyhqsdsir rvglgviagv
      241 gfditpnltl dagyryhnwg rlentrfkth easlgmryrf
//
LOCUS       WP_235230962             231 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Bordetella
            bronchiseptica].
ACCESSION   WP_235230962
VERSION     WP_235230962.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..>231
                     /product="Ig-like domain-containing protein"
     Region          <21..>231
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 msasdaagnr aaasaeftdq vdktaprapt lqlatdtatg rvtasgkaep gatveitwpd
       61 qtrvtvvadt sgaysatsaa dmpdgaitav aadragntga ptrqryidsv drtaptlgtp
      121 svstaadtgr vsvtgmtepg arvqveipge aprivtadaa grysvvsagd vlqsgtvrvt
      181 atdahgnasa pvhlryqdqv dktapvspsl tvredaasgr atvtgqaepg a
//
LOCUS       WP_235230957             128 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin, partial [Neisseria gonorrhoeae].
ACCESSION   WP_235230957
VERSION     WP_235230957.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 128)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 128)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         <1..>128
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
     Region          <22..128
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 lqnqynkkte nqengtfhaa sslglsavyd fklndkfkpy igarvayghv rhsidstkkt
       61 tgflttagar gaaaptvssp ykntqdahqe snsirrvglg viagvgfdit pnltldagyr
      121 yhnwgrle
//
LOCUS       WP_235230837             551 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase [Neisseria gonorrhoeae].
ACCESSION   WP_235230837
VERSION     WP_235230837.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 551)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..551
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /calculated_mol_wt=62398
     Region          <11..546
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 mdewprypig kkalssimpg kdkenlyqag largradwlv gmnlsrayta aysagygreh
       61 ilsigriqtp tlklvvqrdk eidtfvpyny ytlsvdfett dksvfttlwq vpenwrntdg
      121 yctnleavka lvkqlekstg kvitsnkerk stppplpysl salqkeagkk lglsaskvlk
      181 iaqtlyekyk itsyprtpcr ylpksqmsev kdvfaaiqti dksmlsviek adperqsrvw
      241 ndnqvnkhsh haiiptkasn fdlsvldkne ltvyrmirdr yiaqfypdfe ydstvvevea
      301 cshlfkassq spvisgwkvl lgkdvfegdq idegpalphl kvndevdtls fnpetkkttp
      361 pprfteasll demqtlkdfl knvedeqirk ilksteglgt eatratiidr lfemgymekk
      421 rskiyatekg rnliariptm iadpittakw elalagieag kltlaefmay qqkvitelvg
      481 qakkdavgka rppkqtdsag tkkqavarne ddvcptckeg rlrqrgfken pdkrywgcsr
      541 fpeckhfewv k
//
LOCUS       WP_235230939             131 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-hairpin-helix domain-containing protein [Neisseria
            gonorrhoeae].
ACCESSION   WP_235230939
VERSION     WP_235230939.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 131)
  AUTHORS   Witte,G., Hartung,S., Buttner,K. and Hopfner,K.P.
  TITLE     Structural biochemistry of a bacterial checkpoint protein reveals
            diadenylate cyclase activity regulated by DNA recombination
            intermediates
  JOURNAL   Mol Cell 30 (2), 167-178 (2008)
   PUBMED   18439896
REFERENCE   2  (residues 1 to 131)
  AUTHORS   Doherty,A.J., Serpell,L.C. and Ponting,C.P.
  TITLE     The helix-hairpin-helix DNA-binding motif: a structural basis for
            non-sequence-specific recognition of DNA
  JOURNAL   Nucleic Acids Res 24 (13), 2488-2497 (1996)
   PUBMED   8692686
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12836.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..131
                     /product="helix-hairpin-helix domain-containing protein"
                     /calculated_mol_wt=13724
     Region          15..113
                     /region_name="comE"
                     /note="comEA protein; TIGR01259"
                     /db_xref="CDD:213597"
ORIGIN      
        1 msrggatpyr fllirhivar cgllfetlkg ktmkkmfvlf cmlfscafsl aavninaasq
       61 qelealpgig pakakaiaey raqngafksv ddlikvkgig pavlaklkdq asvgapapkg
      121 pakpvlpavk k
//
LOCUS       WP_235230995             230 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235230995
VERSION     WP_235230995.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 230)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 230)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..230
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=25699
     Region          48..230
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaye hitrdypdaa gankgkistv sdyfrnirth sihprvsvgy dfggwriaad
       61 yaryrkwnnn kysvsikell rndnsgghln iktqktehqe ngtfhavssl glstiydfdt
      121 gsrfkpyiga rvayghvrhq vrsvqqetta vttypqngqp svttggptkk pahhesrsis
      181 slgfgavagv giditpnltl dagyryhnwg rlentrfkth easlgmryrf
//
LOCUS       WP_235231028             232 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235231028
VERSION     WP_235231028.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 232)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 232)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..232
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=25881
     Region          48..232
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaae rithdypept gakkgkistv sdyfrnirth sihprvsvgy dfggwriaad
       61 yaryrkwsds kysvnikelg rndnkssgnh lniktqkteh qengtfhavs slglstiydf
      121 dtgsrfkpyi garvayghvr hqvrsvqqet tavttypqng qpsvttggpt kkpahhesrs
      181 isslgfgava gvgiditpnl tldagyryhn wgrlentrfk theaslgmry rf
//
LOCUS       WP_235231033             144 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin, partial [Neisseria gonorrhoeae].
ACCESSION   WP_235231033
VERSION     WP_235231033.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 144)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 144)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         <1..144
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
     Region          <22..144
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 hlniktqkte hqengtfhav sslglstiyd fdtgsrfkpy igmrvayghv rhqvrsveqe
       61 teiittypsd gggkvslpsk mppkpahhqs nsirrvglgv iagvgfditp nltldagyry
      121 hnwgrlentr fktheaslgv ryrf
//
LOCUS       WP_235231043             705 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA domain-containing protein [Vibrio paracholerae].
ACCESSION   WP_235231043
VERSION     WP_235231043.1
KEYWORDS    RefSeq.
SOURCE      Vibrio paracholerae
  ORGANISM  Vibrio paracholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024486.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13086.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Vibrio paracholerae"
                     /db_xref="taxon:650003"
     Protein         1..705
                     /product="AAA domain-containing protein"
                     /GO_function="GO:0004386 - helicase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=81071
     Region          287..>338
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(294..300,338)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          <389..>705
                     /region_name="DNA2"
                     /note="Superfamily I DNA and/or RNA helicase [Replication,
                     recombination and repair]; COG1112"
                     /db_xref="CDD:440729"
ORIGIN      
        1 mnnqgwihyw rnsladadsa kgalkkqdlk syvrvttdef kegklkpdst lledlfrnep
       61 dtltavqihh rpvtyylrkv hgkdyggnmp svltpiicsl wvnregllfp httpfiprdl
      121 lapqgndtft iagvdkldvf lttneipsqs tesipakfeq eeqyqnhkkd whnyygltqk
      181 lfadycdrnr ieqfyeeies rglvnkitec lgasrhilkl hdylsnsstp lplldsyatk
      241 tvtkhdecid vsqtvnlrfg hsnsqfplak aqcdalahtl amqegdilav ngppgtgktt
      301 fvlsvvsalw iesalkesqp pliiaastnn qavtniidaf gkdfdegnde lsgrwlpgif
      361 syggflpsay gqleaaksyq tkhfyekveq ldfldqaqah yldrakqafp qqnfadvtqv
      421 kayllaelrq hknqldhiqn nwhhynrkln dihsrlganp qqtlanqqqa vsnaqvlken
      481 akkkltewrs ylgnestwlt lfkwlppikn klelqrrsfm fnlidhdedq ieslssdqfe
      541 illkqvfssk kddfedqknr yqswlaqyqe feqsqlnwld sinnftevsl eqtipqladi
      601 dsvldittrf rmfrlavhyw earwllscrd lgqelnkqar ktglktvrpr wqrrmmltpc
      661 ivstfhslps hmtyqshvgn nefetdylln eidllivdea gqvap
//
LOCUS       WP_235231047             157 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6948 domain-containing protein [Neisseria gonorrhoeae].
ACCESSION   WP_235231047
VERSION     WP_235231047.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046222.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22253.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..157
                     /product="DUF6948 domain-containing protein"
                     /calculated_mol_wt=17002
ORIGIN      
        1 meankfevks lsdlikvfag iaadfeaamg vkradistef depqhepqpp vtvaeqkgin
       61 dfaigkevii rtysagvwfg vlkqkagnev iltkarrmys wwakesisls gvarhgirqd
      121 gsqicgelds vwleaieiip vtggaaesir talevaq
//
LOCUS       WP_235231092             229 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235231092
VERSION     WP_235231092.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 229)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..229
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=25833
     Region          48..229
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaae rithdypept gakkdkistv sdyfrnirth sihprvsvgy dfggwriaad
       61 yaryrkwndn kysvdikell rnkdngnrid rktenqengs fhavsslgls avydfklndk
      121 fkpyigarva yghvrhsids tkktieflta psnapngast nydispktqn ahqesnsirr
      181 vglgviagvg fgitpnltld agyryhnwgr lentrfkthe aslgvryrf
//
LOCUS       WP_235231105             265 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235231105
VERSION     WP_235231105.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 265)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 265)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..265
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=29449
     Region          92..265
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mnparkkpsl lfssllfssl lfssllfpsa aqaasegngr gpyvqadlay aaerithdyp
       61 kptgtkkgkk istvsdyfrn irthsvhprv svgydfggwr iaadyaryrk wkesnyskkv
      121 tefkhqngtk kedktehqgn gsfhatsslg lsaiydfkln dkfkpyigvr vayghvkhqv
      181 rsvesetttv tthngapvpq gptpkpayhe srsisslgfg avagvgidit pkltldagyr
      241 yhnwgrlent rfktheaslg mryrf
//
LOCUS       WP_235230968              54 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaB-like helicase N-terminal domain-containing protein [Bordetella
            bronchiseptica].
ACCESSION   WP_235230968
VERSION     WP_235230968.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
REFERENCE   1  (residues 1 to 54)
  AUTHORS   Fass,D., Bogden,C.E. and Berger,J.M.
  TITLE     Crystal structure of the N-terminal domain of the DnaB hexameric
            helicase
  JOURNAL   Structure 7 (6), 691-698 (1999)
   PUBMED   10404598
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012974.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00772.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..54
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..54
                     /product="DnaB-like helicase N-terminal domain-containing
                     protein"
                     /GO_function="GO:0003678 - DNA helicase activity [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /calculated_mol_wt=5329
     Region          1..>53
                     /region_name="PRK07004"
                     /note="replicative DNA helicase; Provisional"
                     /db_xref="CDD:235907"
ORIGIN      
        1 manrlnaskp advltvhdal qaageseaag glaylnaiad svpssanvrs yaet
//
LOCUS       WP_235231117             448 aa            linear   BCT 02-MAR-2025
DEFINITION  replication initiation factor domain-containing protein [Neisseria
            gonorrhoeae].
ACCESSION   WP_235231117
VERSION     WP_235231117.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 448)
  AUTHORS   Li,A.H., Silvestrini,B., Leone,M.G., Giacomelli,S. and Cheng,C.Y.
  TITLE     Cerebrin-50, a human cerebrospinal fluid protein whose mRNA is
            present in multiple tissues but predominantly expressed in the
            lymphoblastoid cells and the brain
  JOURNAL   Biochem Mol Biol Int 35 (1), 135-144 (1995)
   PUBMED   7735128
REFERENCE   2  (residues 1 to 448)
  AUTHORS   Balson,D.F. and Shaw,W.V.
  TITLE     Nucleotide sequence of the rep gene of staphylococcal plasmid pCW7
  JOURNAL   Plasmid 24 (1), 74-80 (1990)
   PUBMED   2270231
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014537.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02486.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..448
                     /product="replication initiation factor domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /calculated_mol_wt=50803
     Region          73..401
                     /region_name="NicK"
                     /note="DNA relaxase NicK [Replication, recombination and
                     repair]; COG2946"
                     /db_xref="CDD:442189"
ORIGIN      
        1 mgdkqgmtke vagvmteapa dgrkpatasn lppplsnrgg tetetagrvq evfecyetyi
       61 tdgkgnllgv plrrgvsdsa fidqitfsih edtffhvygl sfdlfddddf iraasakmee
      121 ifgfgiieka khsggrfyeg cwlmgtenaq ygrvhyggqr etmlveltav gcnaanigwe
      181 srlfdfltna irpkitsvdi akdffngeys pnqaredrnk glftchhvkp kgeclgsdwe
      241 eedeakmtsg ktygigsres skyvriyekg kqlgdktstw trfeiefkak divipfevlq
      301 npgeyfggay picerfaqka trihavkedk vvsadrclew vkkqfgraan glkfifpeld
      361 kaklfeliep shhklpksla peaydcaflk sqviheqpaf kpyndpyymy eyyenlekql
      421 eqqkhvnnee synnfiydkf arlpiswa
//
LOCUS       WP_235231123             233 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235231123
VERSION     WP_235231123.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 233)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 233)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..233
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=25826
     Region          49..233
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaae rithdypeat aqkkgttist vsdyfrnirt hsvhprvsvg ydfggwriaa
       61 dyaryrkwnn skysvsikel lrndnsggql nikhqktehq engtfhaass lglsavydfd
      121 tgsrfkpyag vrvayghvrh gidstkkitg tltaypnaad aaatvypdgh pqkntyqksn
      181 ssrrlgfgam agvgidvapg ltldagyryh nwgrlentrf ktheaslgvr yrf
//
LOCUS       WP_235231125             272 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235231125
VERSION     WP_235231125.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 272)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 272)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..272
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=30308
     Region          96..272
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 melicirptk nfssllfspl lfssllfssl lfssaaraag edhgrgpyvq adlayaaeri
       61 thdypkptaq kkdtistvsd yfrnirtrsv hprvsvgydf ggwriaadya ryrkwkesns
      121 stkkvtedik dnyretkteh qgngsfhaas slglsavydf klndkfkpyi garvgyghvr
      181 hqvrsvgqet itvtpkpkng tqggpvists pvpayhenrs srrlgfgama gvgidvapgl
      241 tldagyryhy wgrlentrfk theaslgvry rf
//
LOCUS       WP_235231132             234 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235231132
VERSION     WP_235231132.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 234)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 234)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..234
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=26229
     Region          48..234
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaye hitrdypdaa ganqgkistv sdyfrnirth sihprvsvgy dfggwriaad
       61 yaryrkwnnn kysvntkevl rngnensggk lniqtrkteh qengtfhavs slglsavydf
      121 klndkfkpyi garvayghvr hqvrsvqqet divttypkeq dakpsvttgg pipqpayhes
      181 rsisslgfga vagvgidiap kltldagyry hnwgrlentr fktheaslgv ryrf
//
LOCUS       WP_235231164             281 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235231164
VERSION     WP_235231164.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 281)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 281)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..281
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=31657
     Region          90..281
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mnparkkpsl fssllfssll fssllfssaa qaasedggrg pyvqadlaya aerithdype
       61 ptgakkaqls tvsdyfrnir thsihprvsv gydfggwria adyaryrkwn nnkysvdike
      121 lqrndnadsv gnkhlnikhq kterqengtf havsslglst vydfrpndkf kpyigvrvgy
      181 ghvrhsidst kkakntltvy psaadaapth ydnvdlgenq kntyrqnrsi rrvglgviag
      241 igfditpnlt ldtgyryhnw grlentrfkt heaslgmryr f
//
LOCUS       WP_235231183             274 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235231183
VERSION     WP_235231183.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 274)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 274)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..274
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=30247
     Region          92..274
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mnparkkpsl lfssllfssl lfssllfssa aqaasegngr gpyvqadlay ayehitrdyp
       61 daaganqgkk istvsdyfrn irthsihprv svgydfggwr iaadyaryrk wnnnkysvnt
      121 kkvgernnkn tnvaqylkte nqengtfhaa sslglsavyd fdtgsrfkpy agvrvayghv
      181 khqvrsvese ttivlstpkg vqtpgrhikg pthqpayhes rsisslgfga magvgidvap
      241 gltldagyry hnwgrlentr fktheaslgv ryrf
//
LOCUS       WP_235231172             144 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA cytosine methyltransferase [Neisseria gonorrhoeae].
ACCESSION   WP_235231172
VERSION     WP_235231172.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012372.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00145.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..144
                     /product="DNA cytosine methyltransferase"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=16012
     Region          <55..143
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
ORIGIN      
        1 maghqdetdf mrscaglsdi nlkrlalipk nggnrlafah ipelqlecfi gkdnsfkdtf
       61 grlwwdkpap tittkffsis ngrfahpeed ralslregat lqsfprnyvf kagsrdkiar
      121 lignavppmy aekigraivd niec
//
LOCUS       WP_235231188             235 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235231188
VERSION     WP_235231188.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 235)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 235)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..235
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=26224
     Region          49..235
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaye hithdypkpt gakkgttist vsdyfrnirt hsvhprvsvg ydfggwriaa
       61 dyaryrkwnn nkysvsikel lrndnsasgv rghlniqtqk tehqengtfh aasslglsti
      121 ydfdtgsrfk pyigarvayg hvrhqvrsve qeteivttyp kkgapspipg aptkkpahhe
      181 srsisslgfg avagvgidit pnltldagyr yhnwgrlent rfktheaslg vryrf
//
LOCUS       WP_235231244             243 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ATP-binding cassette domain-containing protein
            [Thermotoga].
ACCESSION   WP_235231244
VERSION     WP_235231244.1
KEYWORDS    RefSeq.
SOURCE      Thermotoga
  ORGANISM  Thermotoga
            Bacteria; Thermotogati; Thermotogota; Thermotogae; Thermotogales;
            Thermotogaceae.
REFERENCE   1  (residues 1 to 243)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 243)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 243)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 243)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Thermotoga"
                     /db_xref="taxon:2335"
     Protein         1..243
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=28232
     Region          17..239
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            48..55
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213179"
     Site            order(51..52,54..56,178..179,210)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:213179"
     Site            143..152
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213179"
     Site            174..179
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213179"
     Site            182..185
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213179"
     Site            206..212
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213179"
ORIGIN      
        1 mtrrekeitm ksekfpirfe nfsisvdgks vlenitvsfv egmnvlygpr gsgksfllrs
       61 ivklnveifn eisrsgsvyl fdqnvqdldd iylrknalyl dtsfidamnr ytfdeflkla
      121 lkrkisledf seklddlgil rmlirgrktp lsvfspaeki slllfileqk kpriilmdcl
      181 ldhlddenle kimdmflkmk eertfvistr ilqrflyiad llvilnngki nyvgspkdfv
      241 lkm
//
LOCUS       WP_235231311             227 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235231311
VERSION     WP_235231311.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 227)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 227)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..227
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=25596
     Region          48..227
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaae rithdypept gakkdkistv sdyfrnirth svhprvsvgy dfggwriaad
       61 yaryrkwnnn kysvsikell rnkgngnrtd qktenqengt fhavsslgls avydfdtgsr
      121 fkpyigarva yghvrhsids tkkttevtti lhgpdtiptv ypgkktqnah hqsnsirrvg
      181 lgviagvgfd itpkltldag yryhnwgrle ntrfktheas lgmryrf
//
LOCUS       WP_235231360             252 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein [Taylorella
            equigenitalis].
ACCESSION   WP_235231360
VERSION     WP_235231360.1
KEYWORDS    RefSeq.
SOURCE      Taylorella equigenitalis
  ORGANISM  Taylorella equigenitalis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Taylorella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Taylorella equigenitalis"
                     /db_xref="taxon:29575"
     Protein         1..252
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=28682
     Region          1..>219
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
ORIGIN      
        1 mfqftglivd wmshipvgel wqeksseliw mlvamlifgv ttvcaelled qafagafpmr
       61 lrwnfhriml gksysfyqne fagrlsakvl qtalavretv mesinivvya lvlgvsavvl
      121 lsqfnaylil pfvvwfalyf vagyyfipkl akysqmqada rsmmtgritd ayaniqtvkl
      181 fshtshevgy aqeamdeflv tvhkqmriit lmrmsinwlr llplcfayma cltglcfrlq
      241 gswkisgppk ma
//
LOCUS       WP_235231446             980 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: penicillin-binding transpeptidase domain-containing
            protein [Lachnospiraceae].
ACCESSION   WP_235231446
VERSION     WP_235231446.1
KEYWORDS    RefSeq.
SOURCE      Lachnospiraceae
  ORGANISM  Lachnospiraceae
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales.
REFERENCE   1  (residues 1 to 980)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..980
                     /organism="Lachnospiraceae"
                     /db_xref="taxon:186803"
     Protein         1..980
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /calculated_mol_wt=109060
     Region          18..>360
                     /region_name="pbp2_mrdA"
                     /note="penicillin-binding protein 2; TIGR03423"
                     /db_xref="CDD:274573"
     Region          <609..956
                     /region_name="pbp2_mrdA"
                     /note="penicillin-binding protein 2; TIGR03423"
                     /db_xref="CDD:274573"
ORIGIN      
        1 mynlwdrikt gileflqsri fviivvfcvm sailvqrvfy lqivkgqeyy ddyklqiqkt
       61 kevqgtrgni ydrngnllay nelaysvtie dtgeydsikq knkemnkvit tviemvesng
      121 dtvinsfgii ldndneymfv henetqklrf iadvfgkkti delskkqqnm saqdiidylc
      181 tdeiygygid qkkmekedvl klinvryais lnnfqkyitt tiaedvseet vadvmenlds
      241 lqgvnieees lrrytdsycf aniigytgqi sqeeydalsk eeqetysktd tvgksglekt
      301 mdtmlqgkkg evklyvnsvg kvietvkgkd peagndvhlt idanlqkaay hiieqelagi
      361 llakiqnald ydrnqvedgs dviipigdvy ntfisndild mthfgeedag aaeqevygif
      421 tnrkeevvqq isdilqdtna aaykdqpkei qayltylvtd vltngtqiim pdaintndst
      481 ykawkddesi nintylnyai sqnwidtsll keyvskgeey sdsselyqgi vaylldyiss
      541 dnsfdkliyk ymiksgevsg rqiclmlyeq gvleydqaqy dglnsgsita ydflrgkiqt
      601 leitpgqlal epctgsmvvt dpnsgevlac vsypgydnnr lantmdsnyy nklvtdqarp
      661 fynnatqekt apgstykplv aiagltegvi dvntilpctg iykkvepnpk cwiypnahgs
      721 lnvegaiqns cnnffyevgy rlslqdsgld qissdnvegk atstyyssdl gtdtlkkyae
      781 afglgetsgl eipesepqis dessvpsaig qgtnnyttsq laryitavan kgtvynlsli
      841 dkvtsvdgei ikdyepevtn titdvasstw tavhngmqrv vtvahsdifs klnssglsly
      901 gktgtaqqsn thpdhglfvg fvqdesqeva fairiangys styaaeignn vmeyyyqitp
      961 eneiitgaaa eistgtsggd
//
LOCUS       WP_235231406            1532 aa            linear   BCT 02-MAR-2025
DEFINITION  S6 family peptidase [Neisseria gonorrhoeae].
ACCESSION   WP_235231406
VERSION     WP_235231406.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 1532)
  AUTHORS   Maldonado-Contreras,A., Birtley,J.R., Boll,E., Zhao,Y., Mumy,K.L.,
            Toscano,J., Ayehunie,S., Reinecker,H.C., Stern,L.J. and
            McCormick,B.A.
  TITLE     Shigella depends on SepA to destabilize the intestinal epithelial
            integrity via cofilin activation
  JOURNAL   Gut Microbes 8 (6), 544-560 (2017)
   PUBMED   28598765
REFERENCE   2  (residues 1 to 1532)
  AUTHORS   Johnson,T.A., Qiu,J., Plaut,A.G. and Holyoak,T.
  TITLE     Active-site gating regulates substrate selectivity in a
            chymotrypsin-like serine protease the structure of haemophilus
            influenzae immunoglobulin A1 protease
  JOURNAL   J Mol Biol 389 (3), 559-574 (2009)
   PUBMED   19393662
REFERENCE   3  (residues 1 to 1532)
  AUTHORS   Henderson,I.R., Czeczulin,J., Eslava,C., Noriega,F. and Nataro,J.P.
  TITLE     Characterization of pic, a secreted protease of Shigella flexneri
            and enteroaggregative Escherichia coli
  JOURNAL   Infect Immun 67 (11), 5587-5596 (1999)
   PUBMED   10531204
REFERENCE   4  (residues 1 to 1532)
  AUTHORS   Benjelloun-Touimi,Z., Si Tahar,M., Montecucco,C., Sansonetti,P.J.
            and Parsot,C.
  TITLE     SepA, the 110 kDa protein secreted by Shigella flexneri: two-domain
            structure and proteolytic activity
  JOURNAL   Microbiology (Reading) 144 (Pt 7), 1815-1822 (1998)
   PUBMED   9695914
REFERENCE   5  (residues 1 to 1532)
  AUTHORS   Stein,M., Kenny,B., Stein,M.A. and Finlay,B.B.
  TITLE     Characterization of EspC, a 110-kilodalton protein secreted by
            enteropathogenic Escherichia coli which is homologous to members of
            the immunoglobulin A protease-like family of secreted proteins
  JOURNAL   J Bacteriol 178 (22), 6546-6554 (1996)
   PUBMED   8932311
REFERENCE   6  (residues 1 to 1532)
  AUTHORS   Bachovchin,W.W., Plaut,A.G., Flentke,G.R., Lynch,M. and
            Kettner,C.A.
  TITLE     Inhibition of IgA1 proteinases from Neisseria gonorrhoeae and
            Hemophilus influenzae by peptide prolyl boronic acids
  JOURNAL   J Biol Chem 265 (7), 3738-3743 (1990)
   PUBMED   2105953
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014452.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02395.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..1532
                     /product="S6 family peptidase"
                     /GO_function="GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=168648
     Region          28..849
                     /region_name="Peptidase_S6"
                     /note="Immunoglobulin A1 protease; pfam02395"
                     /db_xref="CDD:396804"
     Region          747..978
                     /region_name="PL1_Passenger_AT"
                     /note="Pertactin-like passenger domains (virulence
                     factors), C-terminal, subgroup 1, of autotransporter
                     proteins of the type V secretion system of Gram-negative
                     bacteria. This subgroup includes the passenger domains of
                     Neisseria and Haemophilus IgA1 proteases; cd01343"
                     /db_xref="CDD:238653"
     Region          961..>1109
                     /region_name="tolA_full"
                     /note="TolA protein; TIGR02794"
                     /db_xref="CDD:274303"
     Region          <1021..1224
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          1287..>1467
                     /region_name="Autotransporter"
                     /note="Autotransporter beta-domain; pfam03797"
                     /db_xref="CDD:461054"
ORIGIN      
        1 mkakrfkina islsiflaya ltpyseaalv rddvdyqifr dfaenkgkff vgatdlsvkn
       61 krgqnignal snvpmidfsv advnkriatv vdpqyavsvk hakaevhtfy ygqynghndv
      121 adkeneyrvv eqnnyephka wgasnlgrle dynmarfnkf vtevapiapt dagggldtyk
      181 dknrfssfvr igagrqlvye kgvyhqegne kgydlrdlsq ayryaiagtp ykdinidqtm
      241 ntegligfgn hnkqysaeel kqalsqdalt nygvlgdsgs plfafdkqkn qwvflgtydy
      301 wagygkkswq ewniykkefa dkikqhdnag tvkgngehhw kttgtnshig stavrlanne
      361 gdanngqnvt fedngtlvln qninqgaggl ffkgdytvkg annditwlga gidvadgkkv
      421 vwqvknpngd rlakigkgtl eingtgvnqg qlkvgdgtvi lnqkadadkk vqafsqvgiv
      481 sgrgtlvlns snqinpdnly fgfrggrlda ngndltfehi rnvdegariv nhntdhasti
      541 tltgkslitn pnslsvhsiq ndydeddysy yyrprrpipq gkdlyyknyr yyalksggsv
      601 napmpengva enndwvfmgy tqeeakknam nhknnqrisg fsgffgeeng kghngalnln
      661 fngksaqnrf lltgganlng kisvtqgnvl lsgrptphar dfvnkssark dahfsknnev
      721 vfeddwinrt fkaaeiavnq sasfssgrnv sditanitat dnakvnlgyk ngdevcvrsd
      781 ytgyvtcntg nlsdkalnsf datringnvn lnqnaalvlg kaalwgkiqg qgnsrvslnq
      841 hskwhltgds qvhnlslads hihlnnasda qsankyhtik inhlsgnghf hyltdlaknl
      901 gdkvlvkesa sghyqlhvqn ktgepnqegl dlfdassvqd rsrlfvslan hyvdlgalry
      961 tiktengitr lynpyagnrr pvkpapspaa ntasqaqkat qtdgaqiakp qnivvappsp
     1021 qanqaeealr qqakaeqvkr qqaaeaekva rqkdeeakrk aaeiarqqee arkaaelaak
     1081 qkaeaerkar elarqkaeea shqanakpkr rrrrailprp papvfslddy dakdnsessi
     1141 gnlarviprm grelindyee ipleeledea eeerrqatqf qpksrnrrai ssepssdeda
     1201 sesvstsdkh pqdntelhek vetaglqpra aqprtqaaaq adavstntns alsdamastq
     1261 silldtgasl trhiaqksrt daeknsvwms ntgygrdyas aqyrrfsskr tqtqigidrs
     1321 lsenmqiggv ltysdsqhtf dqaggkntfv qanlygkyyl ndawyvagdi gagslrsrlq
     1381 tqqkanfnrt siqtgltlgn tlkinqfeiv psagirysrl ssadyklgdd svkvssmavk
     1441 tltagldfay rfkvgnltvk pllsaayfan ygkggvnvgg ksfaykadnq qqysagaall
     1501 yrnvtlnvng sitkgkqlek qksgqikiqi rf
//
LOCUS       WP_235231627              77 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Faecalicatena contorta].
ACCESSION   WP_235231627
VERSION     WP_235231627.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017416.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05598.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..77
                     /product="transposase"
                     /calculated_mol_wt=8908
     Region          1..>77
                     /region_name="transpos_IS5_1"
                     /note="IS5 family transposase; NF033578"
                     /db_xref="CDD:468095"
ORIGIN      
        1 mnpnnrwikm adaipwdvfe kkysrlfkvk tgnvakplrt algaliiqtk fqysdrelve
       61 qitenpylqy figlpgy
//
LOCUS       WP_235231644             376 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Faecalicatena
            contorta].
ACCESSION   WP_235231644
VERSION     WP_235231644.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13407.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..376
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=40371
     Region          48..367
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mkkkllsvll caamvatmav gcgssdssse ssddaaaeed ggeskefkig iamktqdgpy
       61 fvaltkgiqe kcaelglves addvvvlnan mdvakqsenf etfisqkydm vfcdcidpdn
      121 viadeqscyd agipvinids gvndgsycvt tvysdnkqng rlcgksfaes mgdeeiysim
      181 lsgekgnvag nerrqglicg vleqrlgise eeaweltaea ddellnkgsy tneeakftia
      241 gqgwgnwtvn dilndandlv vktkgklntm faendqmlfg gmqaaddagl tgihyvaaad
      301 gaqeaydyin gttecksgey yctgenspvq vaitaaniak eilvdgkdpe sydeitltea
      361 icvtkdnvde ryefgf
//
LOCUS       WP_235231722             475 aa            linear   BCT 02-MAR-2025
DEFINITION  CoA-binding protein [Bordetella bronchiseptica].
ACCESSION   WP_235231722
VERSION     WP_235231722.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024773.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13380.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..475
                     /product="CoA-binding protein"
                     /calculated_mol_wt=50412
     Region          20..>469
                     /region_name="PatZN"
                     /note="Acyl-CoA synthetase (NDP forming) [Energy
                     production and conversion]; COG1042"
                     /db_xref="CDD:440664"
ORIGIN      
        1 mksvtqltvn adhlqgaiga lfkartvavv gisadhaklg nvilrnvvkn gfagniygvc
       61 raplepgvfd agyervrfvq afseieepvd valfavpadm vvtalasvpl grlrlavila
      121 sgftetgerg asletalrqy cletqlpvvg pncqgvvvpg vklqmtfspm ynqmlegkva
      181 ivsqsgamag ymannlmrrg vglccvvssg neavltaady ihaladkpec rvvlcyieqi
      241 kngrhfarsv qrlgpqqriv vvksgrstag vaaasshtga masddrvidg vfrqlgvvra
      301 rdsataidva malangrrmk ggavgilsva gglavelsdl lemdgftvpp fdpdtlerlk
      361 akvpefgasr npidlsgail tqeslfeevl nlfararnld gfaiistfir npafahaivr
      421 myrstdkpvv vcwtgtpeqt pesleiltrs gipiygdtgr valalrairg dtdis
//
LOCUS       WP_235231761             390 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: SpoIIE family protein phosphatase [Lachnospiraceae].
ACCESSION   WP_235231761
VERSION     WP_235231761.1
KEYWORDS    RefSeq.
SOURCE      Lachnospiraceae
  ORGANISM  Lachnospiraceae
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales.
REFERENCE   1  (residues 1 to 390)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Lachnospiraceae"
                     /db_xref="taxon:186803"
     Protein         1..390
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=43195
     Region          35..218
                     /region_name="SpoIIE"
                     /note="Stage II sporulation protein E (SpoIIE); pfam07228"
                     /db_xref="CDD:462119"
ORIGIN      
        1 msvsvdiswk slnkhheelc gdkvevlste dseiviladg mgsgvkanil atltskilgt
       61 mflegasida cvdtiaktlp vckvrevaya tfsilqifcn geaylveydn plcvfvrdgk
      121 ivnypykerv iegktireyr fqvqlkdcfv lmsdgviyag vgellnfgwt wenmaeytlk
      181 ctkqtlsasr laamlsqacd dlygqkpgdd ttvavarvie rriiniftgp pthkedderv
      241 vrdfmaqegk kivcggtsan iiarvlkkei itslnyadpt vpptatiegl dlvtegvlti
      301 gkalgllkry eqdafdelff eeldadngaa klakyiieec telnlfvgka mnvahqnsnl
      361 pfnlsvrmnl veqlkecveh lgknvhvqyy
//
LOCUS       WP_235231762             570 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: [Fe-Fe] hydrogenase large subunit C-terminal
            domain-containing protein [Lachnospiraceae].
ACCESSION   WP_235231762
VERSION     WP_235231762.1
KEYWORDS    RefSeq.
SOURCE      Lachnospiraceae
  ORGANISM  Lachnospiraceae
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales.
REFERENCE   1  (residues 1 to 570)
  AUTHORS   Peters,J.W., Lanzilotta,W.N., Lemon,B.J. and Seefeldt,L.C.
  TITLE     X-ray crystal structure of the Fe-only hydrogenase (CpI) from
            Clostridium pasteurianum to 1.8 angstrom resolution
  JOURNAL   Science 282 (5395), 1853-1858 (1998)
   PUBMED   9836629
  REMARK    Erratum:[Science 1999 Jan 1;283(5398):35]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014904.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02906.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Lachnospiraceae"
                     /db_xref="taxon:186803"
     Protein         1..570
                     /product="[Fe-Fe] hydrogenase large subunit C-terminal
                     domain-containing protein"
                     /calculated_mol_wt=64290
     Region          9..365
                     /region_name="Nar1"
                     /note="Iron only hydrogenase large subunit, C-terminal
                     domain [Energy production and conversion]; COG4624"
                     /db_xref="CDD:443663"
     Region          363..562
                     /region_name="COG2000"
                     /note="Uncharacterized Fe-S cluster-containing protein
                     [General function prediction only]"
                     /db_xref="CDD:441603"
ORIGIN      
        1 mrvidfkdas ckhcykcvry cevkaisven eqahimknhc incghclevc pqnaktfasd
       61 iervkgylrq gmktiisiap sylgvleydr pgqivdalqk lgfyevreta egaalvtkey
      121 wkllkagemt niittccpsv ndliekyype lvpmmapvvs pmiahgrlik kiygedvkvv
      181 flgpciakke eaigdervcg aidailtfee ivkwwkaegi dihqcedrpm gnpsprvnql
      241 ypisggiiqs vrassiedny ykihidglka cmelfdelkk gdiqhsffev nvceggcikg
      301 pasdkwnqsl irakmdvedq vahreeatei dgngiqlhkt ftdrrvedpm psdqemktil
      361 hamgkytksd elncgacgyp tcrakalavy qkkaeismcl pyavaqaesm snvvmdvtpn
      421 milivdkdlr irecnkkaqe mlgvsreeal eryifefvda ldieealrnk qqvarkkinl
      481 esvkltvies ivyiesiesv lvtyqditke ekaklqhynl kmetvemaqk vidkqmmvaq
      541 eiagllgett aetkvtlskl rdsilfeeee
//
LOCUS       WP_235231786             125 aa            linear   BCT 02-MAR-2025
DEFINITION  bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate
            guanylyltransferase [Faecalicatena contorta].
ACCESSION   WP_235231786
VERSION     WP_235231786.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 125)
  AUTHORS   Thompson,T.B., Thomas,M.G., Escalante-Semerena,J.C. and Rayment,I.
  TITLE     Three-dimensional structure of adenosylcobinamide
            kinase/adenosylcobinamide phosphate guanylyltransferase from
            Salmonella typhimurium determined to 2.3 A resolution,
  JOURNAL   Biochemistry 37 (21), 7686-7695 (1998)
   PUBMED   9601028
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014351.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02283.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..125
                     /product="bifunctional adenosylcobinamide
                     kinase/adenosylcobinamide-phosphate guanylyltransferase"
                     /GO_function="GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /GO_function="GO:0043752 - adenosylcobinamide kinase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=14241
     Region          <60..124
                     /region_name="CobU"
                     /note="Adenosyl cobinamide kinase/adenosyl cobinamide
                     phosphate guanylyltransferase [Coenzyme transport and
                     metabolism]; COG2087"
                     /db_xref="CDD:441690"
ORIGIN      
        1 miliiggayq gkldyakeiy priswidgrs cgeedvyecq gihhfhvyie rmmrndilpe
       61 dfaeqilkrn pemivisdei gygivpadpf ervyreqtgr ictrlakeae ivhrvscgig
      121 kvikg
//
LOCUS       WP_235231818             421 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: peptidoglycan-binding protein [Lachnospiraceae].
ACCESSION   WP_235231818
VERSION     WP_235231818.1
KEYWORDS    RefSeq.
SOURCE      Lachnospiraceae
  ORGANISM  Lachnospiraceae
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales.
REFERENCE   1  (residues 1 to 421)
  AUTHORS   Briers,Y., Volckaert,G., Cornelissen,A., Lagaert,S., Michiels,C.W.,
            Hertveldt,K. and Lavigne,R.
  TITLE     Muralytic activity and modular structure of the endolysins of
            Pseudomonas aeruginosa bacteriophages phiKZ and EL
  JOURNAL   Mol Microbiol 65 (5), 1334-1344 (2007)
   PUBMED   17697255
REFERENCE   2  (residues 1 to 421)
  AUTHORS   Gooley,P.R., O'Connell,J.F., Marcy,A.I., Cuca,G.C., Salowe,S.P.,
            Bush,B.L., Hermes,J.D., Esser,C.K., Hagmann,W.K., Springer,J.P. et
            al.
  TITLE     The NMR structure of the inhibited catalytic domain of human
            stromelysin-1
  JOURNAL   Nat Struct Biol 1 (2), 111-118 (1994)
   PUBMED   7656014
REFERENCE   3  (residues 1 to 421)
  AUTHORS   Foster,S.J.
  TITLE     Cloning, expression, sequence analysis and biochemical
            characterization of an autolytic amidase of Bacillus subtilis 168
            trpC2
  JOURNAL   J Gen Microbiol 137 (8), 1987-1998 (1991)
   PUBMED   1683402
REFERENCE   4  (residues 1 to 421)
  AUTHORS   Dideberg,O., Charlier,P., Dive,G., Joris,B., Frere,J.M. and
            Ghuysen,J.M.
  TITLE     Structure of a Zn2+-containing D-alanyl-D-alanine-cleaving
            carboxypeptidase at 2.5 A resolution
  JOURNAL   Nature 299 (5882), 469-470 (1982)
   PUBMED   7121588
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013625.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01471.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Lachnospiraceae"
                     /db_xref="taxon:186803"
     Protein         1..421
                     /product="peptidoglycan-binding protein"
                     /calculated_mol_wt=46859
     Region          29..115
                     /region_name="CarboxypepD_reg"
                     /note="Carboxypeptidase regulatory-like domain; pfam13620"
                     /db_xref="CDD:433354"
     Region          <294..317
                     /region_name="SpoIID"
                     /note="Peptidoglycan hydrolase (amidase) enhancer domain
                     SpoIID [Cell wall/membrane/envelope biogenesis]; COG2385"
                     /db_xref="CDD:441951"
     Region          341..409
                     /region_name="PGRP"
                     /note="Peptidoglycan-binding (PGRP) domain of
                     peptidoglycan hydrolases [Cell wall/membrane/envelope
                     biogenesis]; COG3409"
                     /db_xref="CDD:442635"
ORIGIN      
        1 mnamnpnqld tpdkgklqin itseinaypi adatisisyt gvpesqleql ktdssgqtev
       61 ielntppley stnpaieeqp yaeytfqvea pgyepvsiag aellpdvtai qnislrptdt
      121 pepseevfvi pahtlygtyp akipedeikp mnetgeivls rvvvpeyivv hdgsprdsta
      181 qnyyvkykdy iknvasseiy atwpantira nvlaimsftl nrvytewyrn qgydftitss
      241 tafdhkwipe rnvfdtisvi vdelfadyls rpnvrqpilt qycdgrrvqc pnwmtqwgsm
      301 slgeqgytpi eilryyygdd myintaeais gipsswpgyn leqgssgpkv rqmqeqlnti
      361 asaypaipkv tadgiygpat aaavqkfqsv fglpatgvvd ystwykisev yvgvsriael
      421 v
//
LOCUS       WP_235231822             207 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: cell wall hydrolase [Lachnospiraceae].
ACCESSION   WP_235231822
VERSION     WP_235231822.1
KEYWORDS    RefSeq.
SOURCE      Lachnospiraceae
  ORGANISM  Lachnospiraceae
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales.
REFERENCE   1  (residues 1 to 207)
  AUTHORS   Boland,F.M., Atrih,A., Chirakkal,H., Foster,S.J. and Moir,A.
  TITLE     Complete spore-cortex hydrolysis during germination of Bacillus
            subtilis 168 requires SleB and YpeB
  JOURNAL   Microbiology (Reading) 146 (Pt 1), 57-64 (2000)
   PUBMED   10658652
REFERENCE   2  (residues 1 to 207)
  AUTHORS   Ishikawa,S., Yamane,K. and Sekiguchi,J.
  TITLE     Regulation and characterization of a newly deduced cell wall
            hydrolase gene (cwlJ) which affects germination of Bacillus
            subtilis spores
  JOURNAL   J Bacteriol 180 (6), 1375-1380 (1998)
   PUBMED   9515903
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019128.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07486.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Lachnospiraceae"
                     /db_xref="taxon:186803"
     Protein         1..207
                     /product="cell wall hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=21853
     Region          49..>104
                     /region_name="vATP-synt_E"
                     /note="ATP synthase (E/31 kDa) subunit; cl23750"
                     /db_xref="CDD:419987"
     Region          102..206
                     /region_name="CwlJ"
                     /note="Cell wall hydrolase CwlJ, involved in spore
                     germination [Cell cycle control, cell division, chromosome
                     partitioning, Cell wall/membrane/envelope biogenesis];
                     COG3773"
                     /db_xref="CDD:442987"
ORIGIN      
        1 miknkrlssm fvflaacslm atgftsqaas lqsetnhttg ietadiqtta mqtiseefva
       61 sasevtaegq qmaaeetarr eqeakeqaer eaqaakelqq kqellasiif ceagnqpyeg
      121 qvavgavvln rvnsgsypns ieeviyqpgq fgpastgwln qvrnsggyta talqaaadal
      181 aganpvggcl yfdkggcgtk igdhyfh
//
LOCUS       WP_235231839             271 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: transporter substrate-binding domain-containing
            protein [Lachnospiraceae].
ACCESSION   WP_235231839
VERSION     WP_235231839.1
KEYWORDS    RefSeq.
SOURCE      Lachnospiraceae
  ORGANISM  Lachnospiraceae
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales.
REFERENCE   1  (residues 1 to 271)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Lachnospiraceae"
                     /db_xref="taxon:186803"
     Protein         1..271
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=29023
     Region          43..262
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mkkfiaftls limvlslaac gssdskedsk estesqsdsd yvkekgtlvv gitnfepmdy
       61 keegsdewvg fdadmakafa dslgvdvefv eidwdnkime ldgktidcvw ngmtltdevt
      121 samecsnayc knaqvvvvps dkadqyqdtd sladlafave tgsageeevs alnleytava
      181 sqadalmevs agtsdaavid llmaaamige gtsyesltht velnseeygv gfrkgsdlae
      241 alneffassy adgsmmecae kygvkdaile q
//
LOCUS       WP_235231919             417 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5711 family protein [Faecalicatena contorta].
ACCESSION   WP_235231919
VERSION     WP_235231919.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039834.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18975.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..417
                     /product="DUF5711 family protein"
                     /calculated_mol_wt=46685
     Region          74..415
                     /region_name="DUF5711"
                     /note="Family of unknown function (DUF5711); pfam18975"
                     /db_xref="CDD:465936"
ORIGIN      
        1 miqrrnknlh vvreqedptd eivkdimqel nnentpqeel neqikqhkke qwrkriicva
       61 vvlvamvgiy llvnlqtynq artidsyqns gtsnnsyiqf segvlkysrd gisyldqnge
      121 eqwnqsyqmk npfvdvgeka aavadkggnd ilvfqkngik geihttipie kisvseqgiv
      181 sailknessa kimcydtagn vlvehktsla gtgypldval sangevmqvl ylytqdgkit
      241 skvvyynfge ageedadhqv ttkeyedtim asgfflnsst svavgdncls iyqgreipke
      301 etkitiekei kslfhsdkyi gmvlknegke gyelrlynsh gkvvlsedft gdyanakicg
      361 gqvilydgkk csifmksgiq kfdgemddni leifpvagvn kyilmstdgm kkirlvk
//
LOCUS       WP_235231936             107 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: septum formation initiator family protein
            [Lachnospiraceae].
ACCESSION   WP_235231936
VERSION     WP_235231936.1
KEYWORDS    RefSeq.
SOURCE      Lachnospiraceae
  ORGANISM  Lachnospiraceae
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales.
REFERENCE   1  (residues 1 to 107)
  AUTHORS   Levin,P.A. and Losick,R.
  TITLE     Characterization of a cell division gene from Bacillus subtilis
            that is required for vegetative and sporulation septum formation
  JOURNAL   J Bacteriol 176 (5), 1451-1459 (1994)
   PUBMED   8113187
  REMARK    Erratum:[J Bacteriol 1994 Jun;176(11):3442]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016839.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04977.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Lachnospiraceae"
                     /db_xref="taxon:186803"
     Protein         1..107
                     /product="septum formation initiator family protein"
                     /GO_process="GO:0051301 - cell division [Evidence IEA]"
                     /calculated_mol_wt=12491
     Region          21..104
                     /region_name="FtsB"
                     /note="Cell division protein FtsB [Cell cycle control,
                     cell division, chromosome partitioning]; COG2919"
                     /db_xref="CDD:442163"
ORIGIN      
        1 msgmkqrrrr rrtkksmqrh krsvfavcav vfllfavisv nsmtlrakdq syqaqeqele
       61 eqikeekars keiedleeyv gtdeyvedva keklglvhen eiifkak
//
LOCUS       WP_235231982             530 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Faecalicatena contorta].
ACCESSION   WP_235231982
VERSION     WP_235231982.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 530)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..530
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=61119
     Region          6..126
                     /region_name="REC_YesN-like"
                     /note="phosphoacceptor receiver (REC) domain of YesN and
                     related helix-turn-helix containing response regulators;
                     cd17536"
                     /db_xref="CDD:381091"
     Site            order(11..14,17..19,22,108..109)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381091"
     Region          <230..287
                     /region_name="GGDEF_2"
                     /note="GGDEF-like domain; pfam17853"
                     /db_xref="CDD:465533"
     Region          <428..528
                     /region_name="AraC"
                     /note="AraC-type DNA-binding domain and AraC-containing
                     proteins [Transcription]; COG2207"
                     /db_xref="CDD:441809"
ORIGIN      
        1 mkllklvivd depillqgll htydwesmgf evvgsassge qalevirevn pdvvltdirm
       61 kqitglmvie eiqkeglecl fvvlsayrdf eyakqacdlg afayllkpie ddrlqetmga
      121 ayqkcmerrk adekyeswek llvsdstsfl qvvvqkyvqn rleydkvkev fdaignille
      181 ndrfitvcad idiaykitns ldyeasrlkl lnlleepvke ryfywkmenq egnyifiikt
      241 qdnavvrelk hlledikqkg tspviaaisk pykgiegikr syeeaqklfg iagaagasal
      301 avseeledym dkgssddadi livnavrknn akelkdafih miyhlpkdee lqckyfhkvm
      361 lnvelmvkds ygmtdelkek fqnyysnmqn lnaartvdvc ykiignviee rqkcaekdet
      421 kyfkeyiqaa vayidehldd eelsivsvat hvylnpvyfg rvfkntfhmt fkkyilqqrm
      481 ekakrlleeg dvsigniceq vginnpsyfs hlfkqytgkl pseykkeyev
//
LOCUS       WP_235232165             346 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: PTS sugar transporter subunit IIC [Lachnospiraceae].
ACCESSION   WP_235232165
VERSION     WP_235232165.1
KEYWORDS    RefSeq.
SOURCE      Lachnospiraceae
  ORGANISM  Lachnospiraceae
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024699.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13303.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Lachnospiraceae"
                     /db_xref="taxon:186803"
     Protein         1..346
                     /product="PTS sugar transporter subunit IIC"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /calculated_mol_wt=34845
     Region          31..327
                     /region_name="PTS_EIIC"
                     /note="Phosphotransferase system, EIIC; cl21492"
                     /db_xref="CDD:451270"
ORIGIN      
        1 mltilsgvgl llitlagfsl fslkmpkgql amsgmanaai atflveavhk yitgdllgle
       61 ffrtvgetsg slggvaaaim vpismganpv favtagvavg gygilpgfia gyivglvspi
      121 iekklpegln miggalliap marfiafavn pavnatlvki ggtisaateq spivmgfllg
      181 giikmictsp lssmaltaml sldglamgia aiacvggsft ngiifsklkl gdrsnviavm
      241 lepltqadii tanpipiycs nffgggfagi saaafhiinn apgtaspipg llapfafnsp
      301 vkvilalvfa vlggitagll gsmvfkkrvk tpaaellgne atnaec
//
LOCUS       WP_235232240             378 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: aminotransferase class V-fold PLP-dependent enzyme
            [Lachnospiraceae].
ACCESSION   WP_235232240
VERSION     WP_235232240.1
KEYWORDS    RefSeq.
SOURCE      Lachnospiraceae
  ORGANISM  Lachnospiraceae
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Lachnospiraceae"
                     /db_xref="taxon:186803"
     Protein         1..378
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /calculated_mol_wt=40950
     Region          2..375
                     /region_name="am_tr_V_EF2568"
                     /note="cysteine desulfurase family protein; TIGR01977"
                     /db_xref="CDD:131032"
ORIGIN      
        1 miyldnaatt mhkpqevida vvaamssmgn agrgvndasl sasriiydtr eklchlfhgt
       61 narqiaftnn steslniaik gilnpgdhvi ttmlehnsvl rplyemearg vkltivksne
      121 qgtlniqdie daiteetkli ictngsnltg nyidlkpige mahkhgvlfa vdasqtagvf
      181 pidvqdmqid ilcftghkgl lgpqgtggiy vreglsvrpl ksggsgvqty skihpaempt
      241 aleagtlngh giaglhaale ylektgidsi rnreqdlmwr fyegvkdipn vkiygdfstk
      301 nrcavvtlni gdydssevsd allteynist rsgghcaplm healgtveqg avrfsfshyn
      361 teeevdtaik airelsqd
//
LOCUS       WP_235232348             417 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: Wadjet anti-phage system protein JetD
            domain-containing protein [Lachnospiraceae].
ACCESSION   WP_235232348
VERSION     WP_235232348.1
KEYWORDS    RefSeq.
SOURCE      Lachnospiraceae
  ORGANISM  Lachnospiraceae
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales.
REFERENCE   1  (residues 1 to 417)
  AUTHORS   Doron,S., Melamed,S., Ofir,G., Leavitt,A., Lopatina,A., Keren,M.,
            Amitai,G. and Sorek,R.
  TITLE     Systematic discovery of antiphage defense systems in the microbial
            pangenome
  JOURNAL   Science 359 (6379) (2018)
   PUBMED   29371424
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09983.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Lachnospiraceae"
                     /db_xref="taxon:186803"
     Protein         1..417
                     /product="Wadjet anti-phage system protein JetD
                     domain-containing protein"
                     /calculated_mol_wt=48411
     Region          <282..414
                     /region_name="DUF2220"
                     /note="Uncharacterized protein conserved in bacteria
                     C-term(DUF2220); pfam09983"
                     /db_xref="CDD:462934"
ORIGIN      
        1 makkekkdgt ketitlmrwl isqidgeayr rgtlsgerhp mvdqklirll ggqknllsqa
       61 relerdivlg qsgkirfewr dmnmdikkih ysidimpelc rregmedprc rqlryisqmk
      121 kwkekaegtw lagyyaeeic klerglcsla fqkdmedekl yqcldemihl qepvekrifs
      181 arvfrnvkip eerltpskif eqkyeskvit ilrhspeyad gmsddellkv hgilsyaqtl
      241 ewkgplvyll dgtvaidtsl nrygtilgaq alehampksl agvkkiivie nkanyekmqy
      301 qedvlyifch gffspkevrf lktlkdvvda gteywhwgdl dyggirifqf nkenvipelr
      361 pykmskedyi qamelgagve ieagkkerla amnageleel kkcilefgqe ieqellv
//
LOCUS       WP_235232367             411 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: helix-turn-helix domain-containing protein
            [Lachnospiraceae].
ACCESSION   WP_235232367
VERSION     WP_235232367.1
KEYWORDS    RefSeq.
SOURCE      Lachnospiraceae
  ORGANISM  Lachnospiraceae
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Lachnospiraceae"
                     /db_xref="taxon:186803"
     Protein         1..411
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=47221
     Region          <168..404
                     /region_name="adjacent_YSIRK"
                     /note="YSIRK-targeted surface antigen transcriptional
                     regulator; TIGR04094"
                     /db_xref="CDD:274977"
ORIGIN      
        1 mrkesdimnm kvyesmcysl akayttgvrl yqdgtplyyf spyciepdpl gpflsqiids
       61 ghdvgiitts lyqfyafltl kpglrlilgp tcalkgsgqe meellailri eeekknayvr
      121 wlcstpvini qrlawllvsl etmlrkrafa ieevwmerpp esiqnsvqie ytgnrmnnie
      181 dmglsqaveq sfsweqlvcs yvengqadql kelfsappkv ytgsivydel rqiknrgiam
      241 adsvskaair ggldvqqafl amelyiqkle lmqdcpaver lfqemvidfa eqveklrcpa
      301 ddkrhfcrmc iqyisrnvfa pirtesmake lgysrsylcs rfkqemglsi tqyiqqekte
      361 eakrllrfsn ynlsevasll nfssqshfqt vfkritgetp layrkkvkvi k
//
LOCUS       WP_235232095             254 aa            linear   BCT 02-MAR-2025
DEFINITION  pseudouridine-5'-phosphate glycosidase [Faecalicatena contorta].
ACCESSION   WP_235232095
VERSION     WP_235232095.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 254)
  AUTHORS   Reverchon,S., Rouanet,C., Expert,D. and Nasser,W.
  TITLE     Characterization of indigoidine biosynthetic genes in Erwinia
            chrysanthemi and role of this blue pigment in pathogenicity
  JOURNAL   J Bacteriol 184 (3), 654-665 (2002)
   PUBMED   11790734
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016142.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04227.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..254
                     /product="pseudouridine-5'-phosphate glycosidase"
                     /GO_function="GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=28938
     Region          <75..>158
                     /region_name="Indigoidine_A"
                     /note="Indigoidine synthase A like protein; cl00983"
                     /db_xref="CDD:470018"
ORIGIN      
        1 mseyliesal lthglksitn emllsvwkkr ekrivwmesg kiqtgeiqey ctfreksqyy
       61 arinyqnfqh fqrekksgil tasgtmkace ilgiplavtc gmgglmqgqh kedchdilal
      121 aestvslvav spkdmfdlkv tldgiksegi qilgydtdvc sgymfrnnai plsriwkkep
      181 lypktlylre ipdekriknh qilekacayg ierekeghyy hpavnakide ltngksskiq
      241 lealikniew aekl
//
LOCUS       WP_235232426             109 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6145 family protein [Lachnospiraceae].
ACCESSION   WP_235232426
VERSION     WP_235232426.1
KEYWORDS    RefSeq.
SOURCE      Lachnospiraceae
  ORGANISM  Lachnospiraceae
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039359.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19642.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Lachnospiraceae"
                     /db_xref="taxon:186803"
     Protein         1..109
                     /product="DUF6145 family protein"
                     /calculated_mol_wt=12576
     Region          3..109
                     /region_name="DUF6145"
                     /note="Family of unknown function (DUF6145); pfam19642"
                     /db_xref="CDD:437474"
ORIGIN      
        1 mydekvvlcg ansyeekyyl npdfdqlpdt vkdelkimcv lyvhdvggil tlvyeengel
       61 cfevtseegd pmfddigsql kikqlqrekk dllealqmyy kvfflgeev
//
LOCUS       WP_235232442             631 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Faecalicatena contorta].
ACCESSION   WP_235232442
VERSION     WP_235232442.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..631
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=70832
     Region          2..237
                     /region_name="PotC"
                     /note="ABC-type spermidine/putrescine transport system,
                     permease component II [Amino acid transport and
                     metabolism]; COG1177"
                     /db_xref="CDD:440790"
     Region          303..623
                     /region_name="PBP2_PotD_PotF_like_2"
                     /note="The periplasmic substrate-binding component of an
                     uncharacterized active transport system closely related to
                     spermidine and putrescine transporters; contains the type
                     2 periplasmic binding fold; cd13663"
                     /db_xref="CDD:270381"
     Site            order(309,505,508,531,533,569)
                     /site_type="other"
                     /note="putative chemical substrate binding site [chemical
                     binding]"
                     /db_xref="CDD:270381"
ORIGIN      
        1 mkkskrtfgk ilmilmivff ylpilymvif sfndgksltv ftgfslrwyq hmldshdmme
       61 slyttfsial iatfistiag tiaaiglsks kkiirdimdq vnnlplmnpe ivtaigfmll
      121 fitfkiekgy vtmllahiaf cipyvmlsvm pkirsldpnl adaamdlgat pwqalikviv
      181 peitpgiisg sliaftmsvd dfiisyfvtg sgvknlsimv ytmskrvnps inaistlvvv
      241 iitialiiin vgplfmakqa krtdikrrra lvpvlvacca mvgviifanl ngtsnalpye
      301 getlyvynwg eytgehiiqd feaatgatvv menfdsneqm yikvangeay dilvpsdymi
      361 qrlidedylq kldhskldcm dkladavkdl pydrgnqysv pyfwgtvgiv ydknkvdied
      421 lekegynifl dekycgdiyl ydserdsfmm alkalgysmn tdneqeltea ynwlvqcvqt
      481 mkpeivtdei idnmaqgrka lgliysgdaa yvmaenedmg fylpesgtnl wsdamvipkn
      541 aknpelahef infvsdydga ydnssyvgyt spnqevmddl ygpggdyegi saymprtdnd
      601 ndevfvynee trktisnmws kvkiaasnad k
//
LOCUS       WP_235232519             341 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Faecalicatena contorta].
ACCESSION   WP_235232519
VERSION     WP_235232519.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..341
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=39152
     Region          4..152
                     /region_name="NUDIX_MutT_Nudt1"
                     /note="MutT homolog-1 and similar proteins; cd18886"
                     /db_xref="CDD:467596"
     Region          159..308
                     /region_name="NUDIX_Hydrolase"
                     /note="uncharacterized NUDIX hydrolase subfamily; cd04692"
                     /db_xref="CDD:467574"
ORIGIN      
        1 mtglstlcym erdgqylmlh rtvkkhdvnk dkwigvgghf eadespeecl lrevreetgy
       61 tltsyqyrgi vtfvsgngvt eymslftadg fegepilcde gelewvdidd vwklniwegd
      121 kiffrlmder kdffslklvy dgqdklvdas ldgkpmelfd vlnedgtksg virergvahr
      181 egslhatvhm wvvrknqksg ydvllqkrsa ykdsnpgcyd issaghvaag deilesavre
      241 mqeelgihaa keqlhyvgeh rgsfeavfyg rlfkdnelss vyvytepvei enlklqesev
      301 eeviwmdyee crqkvadgtl pnciyedefr mvgeylkkqk f
//
LOCUS       WP_235232614             155 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF5721 family protein [Lachnospiraceae].
ACCESSION   WP_235232614
VERSION     WP_235232614.1
KEYWORDS    RefSeq.
SOURCE      Lachnospiraceae
  ORGANISM  Lachnospiraceae
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040162.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18988.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Lachnospiraceae"
                     /db_xref="taxon:186803"
     Protein         1..155
                     /product="DUF5721 family protein"
                     /calculated_mol_wt=18128
     Region          14..150
                     /region_name="DUF5721"
                     /note="Family of unknown function (DUF5721); pfam18988"
                     /db_xref="CDD:436890"
ORIGIN      
        1 mniftlsaks cmshlllkdt fdrfsfiese ittfnkftid gylhkdfyde apersyaywk
       61 dvreycfsii rgkrtplnfk ivlslaqetf aafladhqld gyrpeeiqgl ylnfhydgst
      121 lqcitgismh tftldktleh ewdeyaqtll aemie
//
LOCUS       WP_235232637             245 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Faecalicatena contorta].
ACCESSION   WP_235232637
VERSION     WP_235232637.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..245
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=26539
     Region          2..>233
                     /region_name="PTR2"
                     /note="Dipeptide/tripeptide permease [Amino acid transport
                     and metabolism]; COG3104"
                     /db_xref="CDD:442338"
ORIGIN      
        1 mtnssttnkq pkavyfcgsi ftftnfsyyg mklvlllfma eetargglgl snaeatslla
       61 sfmafsylsp vvggwisdrf lgpklcvilg mltsgtgyfl aftahsksti qiiivlcvig
      121 sglykstsqt lvgslygnnd prrdgafsmt ytftnigvlf gpflcglvan qwfatkqgge
      181 ileygyrtvf litaiviwag alffaigqkf vlkdlhhads akkvskrkkn lllshllsqk
      241 saeca
//
LOCUS       WP_235232719             270 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Faecalicatena contorta].
ACCESSION   WP_235232719
VERSION     WP_235232719.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..270
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=31798
     Region          5..100
                     /region_name="HTH_MerR-like"
                     /note="Helix-Turn-Helix DNA binding domain of MerR-like
                     transcription regulators; cd00592"
                     /db_xref="CDD:133378"
     Site            order(6..8,22,38..40)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133378"
     Site            order(52,55,59..60,69,82,86,92,96,99..100)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:133378"
     Region          121..263
                     /region_name="AraC_E_bind"
                     /note="Bacterial transcription activator, effector binding
                     domain; smart00871"
                     /db_xref="CDD:214874"
     Region          <190..258
                     /region_name="BltR2"
                     /note="GyrI-like small molecule binding domain [Signal
                     transduction mechanisms]; COG4978"
                     /db_xref="CDD:444003"
ORIGIN      
        1 mkkyfkigei sqlyhigads lryyeklgil kpkrgenqyr lyhlddiwrl nvirelrelg
       61 fsmeqigdyl khhtvsstkv llmeelhmie ekqeklrqlq knveerietl seceekvlgv
      121 vqlqqlpdrs cyyiekgyer deemdvlikq llnknpdksy iigsnhigsv ilaesarnqr
      181 creyegvfii dtegdmvipg geyltisyrg ncnqnyqclp rllayakehg yrmvgdvyei
      241 lwvdihvsgr eeehitelqi rveekarfdt
//
LOCUS       WP_235232754             260 aa            linear   BCT 02-MAR-2025
DEFINITION  arginase family protein [Faecalicatena contorta].
ACCESSION   WP_235232754
VERSION     WP_235232754.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00491.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..260
                     /product="arginase family protein"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=30043
     Region          <79..220
                     /region_name="SpeB"
                     /note="Arginase/agmatinase family enzyme [Amino acid
                     transport and metabolism]; COG0010"
                     /db_xref="CDD:439781"
ORIGIN      
        1 mkeldkaqnl ildfthvype dieskvqdir rvdlsdirgt nmyctaeakr eirkrltsyg
       61 pggihfldng nyhyvtklfa ekirvpfslv lfdyhndmqq pmiheltscg swagemlsdn
      121 pylkqlilig pnkesireip ekfkeklvcv smreieakti ekdlnqiqke lpayisidkd
      181 vldrygartn wnqggmsvdt lqkllsevfr hqkvigvdic gecsleepfs qlvedekvng
      241 ttnailyhfl skyfsekyey
//
LOCUS       WP_235232795            1763 aa            linear   BCT 02-MAR-2025
DEFINITION  SpaA isopeptide-forming pilin-related protein [Faecalicatena
            contorta].
ACCESSION   WP_235232795
VERSION     WP_235232795.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 1763)
  AUTHORS   Kang,H.J., Paterson,N.G., Gaspar,A.H., Ton-That,H. and Baker,E.N.
  TITLE     The Corynebacterium diphtheriae shaft pilin SpaA is built of tandem
            Ig-like modules with stabilizing isopeptide and disulfide bonds
  JOURNAL   Proc Natl Acad Sci U S A 106 (40), 16967-16971 (2009)
   PUBMED   19805181
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2009 Oct 27;106(43):18427]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037639.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17802.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1763
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..1763
                     /product="SpaA isopeptide-forming pilin-related protein"
                     /calculated_mol_wt=194412
     Region          269..402
                     /region_name="TED_2"
                     /note="Thioester domain; pfam20610"
                     /db_xref="CDD:466759"
     Region          546..614
                     /region_name="SpaA"
                     /note="Prealbumin-like fold domain; pfam17802"
                     /db_xref="CDD:465513"
     Region          615..1292
                     /region_name="ClfA"
                     /note="Clumping factor A-related surface protein, MSCRAMM
                     (microbial surface components recognizing adhesive matrix
                     molecules) family, DEv-IgG fold [Cell
                     wall/membrane/envelope biogenesis]; COG4932"
                     /db_xref="CDD:443959"
     Region          1064..1673
                     /region_name="ClfA"
                     /note="Clumping factor A-related surface protein, MSCRAMM
                     (microbial surface components recognizing adhesive matrix
                     molecules) family, DEv-IgG fold [Cell
                     wall/membrane/envelope biogenesis]; COG4932"
                     /db_xref="CDD:443959"
     Region          1647..1710
                     /region_name="SpaA"
                     /note="Prealbumin-like fold domain; pfam17802"
                     /db_xref="CDD:465513"
ORIGIN      
        1 mkfkrktmri vsgmltaitl ftnalspvia yaapadeads ripyyeeikd qldqdevvta
       61 rdievtvgsg fdvkadfsgi eipdsekakv klmaaqndeg kefstdhadi yktvysvepq
      121 ktdhpvyqis rnitvkdvsk eadttvnsds ssdqdsgtge teesedsdde setdssemkq
      181 petdeavnvs eaetetevtg keiteeefda eiestenqet vdpetgttls evmeeavdqg
      241 ialneleage mvtfempmll aaaetgsqsv sitrgswyhy adyglgsyit apyyvswggi
      301 kataycvqps kngpddgtys itklsdgktl akvcyygtka sdengffdek hpdfsagkrf
      361 iithlaaaya ngssdwdsgt natgrslake lynycinmpd ipdvdmsfsd sdvnayvegn
      421 iqrtktitfk adelqtitfk lpqgvklvnv ttgktsaaga sveicggtqf yltaplsqae
      481 dvgalfsskm kgsidkeysa ykittgsstq dlalvfgegv gnekyvdfkv twtkecyisi
      541 vkkdsetsnt lagavygiys daactqlikq mpatdangaa kvtiektqev vylkeisvpt
      601 gytidakayn vtlnigktsn mnvtdkrvta tislhkqdae tgntpqgdat lkgavyglfa
      661 redivhpdgk tgvlykkgtq itslttdkng qasvsnlylg kyyfkeltpp vgylldqeeh
      721 evdcsyegan vpvverkais kedvikqpfq iikaanngkt dadllkgigf sawlasdlkv
      781 kadgsydfss anpvvitadg ktemftdekg yacsiplpyg tyvvkettsk hnyepvddfi
      841 vtinenhpdt pqvwrvlldk efeaklkiik kddetkksvl lantefkvyd ldhqkyveqv
      901 ttypstkvhk syftdangyl ilpnnlkign yrieevtape gytqssayvt vsvdtntaym
      961 idptskdaii eveyenhpvk gdltifkqge llagydhdfq yelcglkgvt fevyaaedif
     1021 tadhqmdeng nrtlyyakda lvakvttded gyayvkdlpl geyyvkeska pegfvhnens
     1081 ekavfvyadq ntpvvfdqvs ftnerqkvsi svekqdadng nvvpgavfgi ynaediinkd
     1141 gqviikadtl lqemtsdedg qakctldlpl gqyyvkelha pagfvssdei lsfdasyqgq
     1201 diqtvelkav kkneptvvki tksdittgee ldgaylqvld qngniidswe sskdeshvik
     1261 rltvgetyil reqfapygyl vanditftie dtaeiqkvem kdevpvaeli lnkkgeflne
     1321 vslvdqikgv vehifhyitg sltdvtfevy aeedikaadg vsedyykade lvatmttdet
     1381 gitklsnlpl gkyyvkevgt ahgyvldsei rhvdlsyvdq ntpvvtyndd wknhrqrvii
     1441 nlvkkekdqd rvleggvfgl yakediksst tgkvlieade iielkstdae gkitfmtdlp
     1501 idaeyyvkel yapagfvnae evqeftvsya genedsvvvd ltfedeattv eitktdltgg
     1561 keipgcklkl vdedgntvee wtsteeahvi kelvvgkkyt lvetqpadgy vtaesieftv
     1621 entaeiqkhq mkddvtkvei skqdiagkel pgakltildk dgkvveswts tkkahhieml
     1681 pigkytlree tapdgylvan dvefevkdtg evqhvtmvde akpavqadtp ktgdernmkl
     1741 wllllgigag glgvafgirr krk
//
LOCUS       WP_235232545             455 aa            linear   BCT 02-MAR-2025
DEFINITION  lectin-like protein [Faecalicatena contorta].
ACCESSION   WP_235232545
VERSION     WP_235232545.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 455)
  AUTHORS   Hakansson,K., Lim,N.K., Hoppe,H.J. and Reid,K.B.
  TITLE     Crystal structure of the trimeric alpha-helical coiled-coil and the
            three lectin domains of human lung surfactant protein D
  JOURNAL   Structure 7 (3), 255-264 (1999)
   PUBMED   10368295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012289.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00059.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..455
                     /product="lectin-like protein"
                     /calculated_mol_wt=50360
     Region          1..>23
                     /region_name="rubredoxin_like"
                     /note="Rubredoxin_like; nonheme iron binding domain
                     containing a [Fe(SCys)4] center. The family includes
                     rubredoxins, a small electron transfer protein, and a
                     slightly smaller modular rubredoxin domain present in
                     rubrerythrin and nigerythrin and detected either...;
                     cd00350"
                     /db_xref="CDD:238210"
     Site            order(4,7,17,20)
                     /site_type="other"
                     /note="iron binding site [ion binding]"
                     /db_xref="CDD:238210"
     Region          306..428
                     /region_name="CLECT"
                     /note="C-type lectin (CTL)/C-type lectin-like (CTLD)
                     domain; cd00037"
                     /db_xref="CDD:153057"
ORIGIN      
        1 mkkcpicgne yehenvcpic giplidtetn savasepekk krfstkkkke epaveepvie
       61 epiipnpaee yaiveepaie eepavkepee kssvkkdsvr eaqeediygl gvkpastggs
      121 ssgssssggr ssgdnvshdg kvtisfkpay vvavvvilll ivaavfivrg mkakkeaeqm
      181 yqyeqdvpae epetteeeid lslvdvnavn vnhweytgki dymvspavvr ldpplnfyay
      241 ttdnkkalle dvsevcidss ssidmrdfdg kmttvtgslt idndrilmsv tdawtdevde
      301 ddtaiheynv visdvswsqa keacesaggy larinsveey nyitnmltsr gytkqhfylg
      361 grrdasgsdy ywvnqnnefi gdalnrsesw sngywyinep sfvdtgsdan gniqenvmnl
      421 fyvngtwyln dssdnlaany psllsgkvgy iiefe
//
LOCUS       WP_235232582             600 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ASKHA domain-containing protein [Lachnospiraceae].
ACCESSION   WP_235232582
VERSION     WP_235232582.1
KEYWORDS    RefSeq.
SOURCE      Lachnospiraceae
  ORGANISM  Lachnospiraceae
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales.
REFERENCE   1  (residues 1 to 600)
  AUTHORS   Hennig,S.E., Jeoung,J.H., Goetzl,S. and Dobbek,H.
  TITLE     Redox-dependent complex formation by an ATP-dependent activator of
            the corrinoid/iron-sulfur protein
  JOURNAL   Proc Natl Acad Sci U S A 109 (14), 5235-5240 (2012)
   PUBMED   22431597
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025925.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14574.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Lachnospiraceae"
                     /db_xref="taxon:186803"
     Protein         1..600
                     /product="ASKHA domain-containing protein"
                     /calculated_mol_wt=65165
     Region          1..596
                     /region_name="COG3894"
                     /note="Uncharacterized 2Fe-2S and 4Fe-4S
                     clusters-containing protein, contains DUF4445 domain
                     [Function unknown]"
                     /db_xref="CDD:443101"
ORIGIN      
        1 mpkitvqpag ksyeytvgkt lleillaeki fvdnpcngkg vcgkcrvkil ggnipeacet
       61 erkllkseel eagirlsclv rpeddleiel lgkerkhevl ttgyipdftf dcdiekrvie
      121 ihkptlsdqt pwedqikeql rmdnisfpal qsatfapgqv tvvlhngevi qveegdtsds
      181 lygvaidigt ttvvcalidm htgkelanas minaqkhfgl dvltrityel ehpldgvekl
      241 rgaivesind miqdicgqag vlkeqiyeit vganctmmhm llgidatpig rapyapmfvk
      301 skdipadsig ihaakgarly clpsvsayig adivagayvc elekekgnvl fidigtngei
      361 vlsshgkllc cscaagpale gmnissgmra aegaiedvei teegvklkvi gdeppigvcg
      421 sgilavvkel lksglvrkdg afikkdklee tdyrypmlql dgrkrefimt espekllitq
      481 gdvrqvqlak gailsgfial lnkagiqmed ldkvmiagqf gahlpadslt gtgilpqeve
      541 drlvyvgnss ktgaymalms aqvkremeel ahnmdymelg atqgyerlfs dclifpdfsk
//
LOCUS       WP_235232836             558 aa            linear   BCT 02-MAR-2025
DEFINITION  relaxase/mobilization nuclease domain-containing protein
            [Faecalicatena contorta].
ACCESSION   WP_235232836
VERSION     WP_235232836.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 558)
  AUTHORS   Meyer,R.
  TITLE     Identification of the mob genes of plasmid pSC101 and
            characterization of a hybrid pSC101-R1162 system for conjugal
            mobilization
  JOURNAL   J Bacteriol 182 (17), 4875-4881 (2000)
   PUBMED   10940031
REFERENCE   2  (residues 1 to 558)
  AUTHORS   Bravo-Angel,A.M., Gloeckler,V., Hohn,B. and Tinland,B.
  TITLE     Bacterial conjugation protein MobA mediates integration of complex
            DNA structures into plant cells
  JOURNAL   J Bacteriol 181 (18), 5758-5765 (1999)
   PUBMED   10482518
REFERENCE   3  (residues 1 to 558)
  AUTHORS   Byrd,D.R. and Matson,S.W.
  TITLE     Nicking by transesterification: the reaction catalysed by a
            relaxase
  JOURNAL   Mol Microbiol 25 (6), 1011-1022 (1997)
   PUBMED   9350859
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015397.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03432.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..558
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /calculated_mol_wt=64555
     Region          72..309
                     /region_name="Relaxase"
                     /note="Relaxase/mobilization nuclease domain; cl21589"
                     /db_xref="CDD:451322"
     Region          269..>523
                     /region_name="GumC"
                     /note="Exopolysaccharide export protein/domain GumC/Wzc1
                     [Cell wall/membrane/envelope biogenesis]; COG3206"
                     /db_xref="CDD:442439"
ORIGIN      
        1 maiikhiksr nanysdaley llfqhnektg kpifddsgrk ilreefymdg lncdpmsfdk
       61 ecertnqffh knqkrgdiks hhyiisfdpa datecgltge kaqalclefa rknfpgyqal
      121 vvthtdghns sgnihthivi nsvrkyaver qdymdkpheq eagykhrstn klldhlkqev
      181 mdmcnreglh qvdllspapa kmtrgeywak thgqdeldkv nakiraaglk pastvfqtqk
      241 qflreaidec sqmsrsfeef qsllldrfni svvekrgsyr ylhpdrdrri saeslganye
      301 kdfleqvfqn henskalshk stlksksass vdyhtdpfvi fyikselrlv tdlqtnvkam
      361 qnqayarkvk isnlqqmant liyiqdhgyd trkdlekqtt diqvkmeeaq eqlsdltskm
      421 ktlnsqihft gqyfasksvy aeflksrnkk kfrqehssei rsyeeardwl kafypdgkml
      481 smktlksqks elqesidaqk svvkqfrdyh keleiaganv dailgmeepf vhnsheqpaq
      541 teksktntqh kkkedktl
//
LOCUS       WP_235232893             299 aa            linear   BCT 02-MAR-2025
DEFINITION  replication initiation protein, partial [Neisseria gonorrhoeae].
ACCESSION   WP_235232893
VERSION     WP_235232893.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 299)
  AUTHORS   Giraldo,R. and Diaz-Orejas,R.
  TITLE     Similarities between the DNA replication initiators of
            Gram-negative bacteria plasmids (RepA) and eukaryotes
            (Orc4p)/archaea (Cdc6p)
  JOURNAL   Proc Natl Acad Sci U S A 98 (9), 4938-4943 (2001)
   PUBMED   11296251
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015076.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03090.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         <1..299
                     /product="replication initiation protein"
     Region          41..171
                     /region_name="Replicase"
                     /note="Replicase family; pfam03090"
                     /db_xref="CDD:427129"
ORIGIN      
        1 pictgvsryn msqlytqpdl flqeriphkp yckdfkeapm lvrsyaaaik rryiqvnpph
       61 lrvfmlfdld yegaglawed nnlpmpawaa inrenggahl ayalsapvlt aeyggrqkal
      121 rylaaleaay kaklrgdvgf vslitknpeh phwltlrgvp dairgydley ladfvdldkf
      181 kpyigrsnve avglsrnctv fnlvsrwahk nvlafkqqgy tvqgwlkevh yqcmrvngdf
      241 pvpmwekevk cisksianwv wykfdiaasn rrfselqahr nslrkttina grtkiitel
//
LOCUS       WP_235232997             601 aa            linear   BCT 02-MAR-2025
DEFINITION  type I-C CRISPR-associated protein Cas8c/Csd1 [Faecalicatena
            contorta].
ACCESSION   WP_235232997
VERSION     WP_235232997.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021243.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09709.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..601
                     /product="type I-C CRISPR-associated protein Cas8c/Csd1"
                     /calculated_mol_wt=67591
     Region          6..574
                     /region_name="Cas8c_I-C"
                     /note="CRISPR/Cas system-associated protein Cas8c;
                     cl12004"
                     /db_xref="CDD:448376"
ORIGIN      
        1 mlkafydyai rndlvlppgy cnktiqayvs lsregqflgi ilgddmpvlc pdigslangk
       61 ekcnpivekr svifkdasdl edkakmkrdf yyqvledgsd rfpefeicvk aaqdektlla
      121 isealnenki kgserisfiv dgkkivkaeg lrdwwniyrk kfihaekkek ticlitgeet
      181 vpletvppvt glavvgghar gdalicfdks afcsydqkks anapvsetaf favkaaldhl
      241 lkkapvlanm kfvhwyeqdv aaendpvlsa nflginmlvd deedeevsae ekkskarsae
      301 nqaskliksv ktgekiahlp sqysivllsg vngrvmvrqy ehgsyeelqs nidlwnkqle
      361 lkalngiqne kskklsarll cllkkhnsds niwdrvnkel peitqavira iihgtslpda
      421 valrslayir sqmlendenq tsmkipdata cqwlkvwlmr kgkeneimse ydskhkssay
      481 hcgaamavha aiqnvamknv nativqryys sasqmpalvl gqisrlsayh lekienewlr
      541 kqyeealngt ycaigneipa tltleqqayf algyrqmctk lqkdknerie kiknnvkdqn
      601 m
//
LOCUS       WP_235232830             391 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: HNH endonuclease domain-containing protein
            [Lachnospiraceae].
ACCESSION   WP_235232830
VERSION     WP_235232830.1
KEYWORDS    RefSeq.
SOURCE      Lachnospiraceae
  ORGANISM  Lachnospiraceae
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales.
REFERENCE   1  (residues 1 to 391)
  AUTHORS   Harrington,L.B., Doxzen,K.W., Ma,E., Liu,J.J., Knott,G.J.,
            Edraki,A., Garcia,B., Amrani,N., Chen,J.S., Cofsky,J.C.,
            Kranzusch,P.J., Sontheimer,E.J., Davidson,A.R., Maxwell,K.L. and
            Doudna,J.A.
  TITLE     A Broad-Spectrum Inhibitor of CRISPR-Cas9
  JOURNAL   Cell 170 (6), 1224-1233 (2017)
   PUBMED   28844692
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024787.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13395.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Lachnospiraceae"
                     /db_xref="taxon:186803"
     Protein         1..391
                     /product="HNH endonuclease domain-containing protein"
                     /calculated_mol_wt=45887
     Region          262..>293
                     /region_name="HNHc"
                     /note="HNH nucleases; HNH endonuclease signature which is
                     found in viral, prokaryotic, and eukaryotic proteins. The
                     alignment includes members of the large group of homing
                     endonucleases, yeast intron 1 protein, MutS, as well as
                     bacterial colicins, pyocins, and...; cl00083"
                     /db_xref="CDD:469607"
ORIGIN      
        1 maqfntsqig yslningeyh ntldiesfsq mmkdpsycyk fywleaivdl isegiqdttf
       61 dtiidemicn awysvrefhi hlsgiqsdgl vrdglerail tltelsdlpa naskveikna
      121 irenneelkk akeqltnmvp gralagffsk saeevpwgsi rrlteyikri dstvtrlpyt
      181 fgdrsrlkke vhfnsewmkm iqdntvnilg wiqyekvkwl qnnnpevpgl iyklapmdek
      241 mrklnnvrkl wegildvhev rdvftgnpin vkqydvdhfi pwsfvmndel wnlmpmdssl
      301 nssksnklpq wdpfflvfae nqysmytlih erealhkrfe acykdnlhsi wagqelyrpg
      361 ntkeefyhil qknmqpvyds arrqgyeiwn v
//
LOCUS       WP_235233236             289 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: uroporphyrinogen decarboxylase family protein
            [Lachnospiraceae].
ACCESSION   WP_235233236
VERSION     WP_235233236.1
KEYWORDS    RefSeq.
SOURCE      Lachnospiraceae
  ORGANISM  Lachnospiraceae
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales.
REFERENCE   1  (residues 1 to 289)
  AUTHORS   Fan,J., Liu,Q., Hao,Q., Teng,M. and Niu,L.
  TITLE     Crystal structure of uroporphyrinogen decarboxylase from Bacillus
            subtilis
  JOURNAL   J Bacteriol 189 (9), 3573-3580 (2007)
   PUBMED   17122346
REFERENCE   2  (residues 1 to 289)
  AUTHORS   Nishimura,K., Nakayashiki,T. and Inokuchi,H.
  TITLE     Cloning and sequencing of the hemE gene encoding uroporphyrinogen
            III decarboxylase (UPD) from Escherichia coli K-12
  JOURNAL   Gene 133 (1), 109-113 (1993)
   PUBMED   8224882
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013381.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01208.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Lachnospiraceae"
                     /db_xref="taxon:186803"
     Protein         1..289
                     /product="uroporphyrinogen decarboxylase family protein"
                     /GO_function="GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /calculated_mol_wt=32266
     Region          20..>238
                     /region_name="URO-D_CIMS_like"
                     /note="The URO-D_CIMS_like protein superfamily includes
                     bacterial and eukaryotic uroporphyrinogen decarboxylases
                     (URO-D), coenzyme M methyltransferases and other putative
                     bacterial methyltransferases, as well as cobalamine (B12)
                     independent methionine synthases; cl00464"
                     /db_xref="CDD:469779"
ORIGIN      
        1 mgdikdfhct ydnsvgisge vtdgldltfp daymhwdtma klskalkehd nasfcelpfc
       61 htveaeamgg iinygnettg prakeyicta veellelpei dfsqgrihev llackalrdq
      121 gehivlqisg pftilnvlid akyvfkgwrk kpeimkevfw kfgnqilkfm eeakkydvdl
      181 isyadssggv nilgpkmaeq vveeftyefl kkaealaddk tlillcpktt fallgmdkae
      241 lvdrkltgpm sygaaciemt gqikfagqmc iknvgyhmdn gifkevklk
//
LOCUS       WP_235233256             147 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Faecalicatena contorta].
ACCESSION   WP_235233256
VERSION     WP_235233256.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 147)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 147)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..147
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=16803
     Region          2..129
                     /region_name="PRK03624"
                     /note="putative acetyltransferase; Provisional"
                     /db_xref="CDD:235142"
ORIGIN      
        1 mvrvmsiddy nqvyalwtki hgfglrsvdd sregierflq rnpttsvvae eegkivgail
       61 cghdgrrgcl yhvcvdeeyr mrgigksmvv famealkkek inkvsliaft kndignafwn
      121 eigwtkrldl nyydftlnee nitafiq
//
LOCUS       WP_235232946             306 aa            linear   BCT 02-MAR-2025
DEFINITION  AraC family transcriptional regulator [Faecalicatena contorta].
ACCESSION   WP_235232946
VERSION     WP_235232946.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 306)
  AUTHORS   Saviola,B., Seabold,R. and Schleif,R.F.
  TITLE     Arm-domain interactions in AraC
  JOURNAL   J Mol Biol 278 (3), 539-548 (1998)
   PUBMED   9600837
REFERENCE   2  (residues 1 to 306)
  AUTHORS   Seabold,R.R. and Schleif,R.F.
  TITLE     Apo-AraC actively seeks to loop
  JOURNAL   J Mol Biol 278 (3), 529-538 (1998)
   PUBMED   9600836
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012392.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00165.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..306
                     /product="AraC family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=35435
     Region          <18..89
                     /region_name="QdoI"
                     /note="Cupin domain protein related to quercetin
                     dioxygenase [General function prediction only]; COG1917"
                     /db_xref="CDD:441521"
     Region          <203..298
                     /region_name="AraC"
                     /note="AraC-type DNA-binding domain and AraC-containing
                     proteins [Transcription]; COG2207"
                     /db_xref="CDD:441809"
ORIGIN      
        1 mgykgtvlkn sitinkiysi hyfeymsdfs fegeshnfwe ficvdkgevg vtagktftil
       61 kkgdvafhqp nefhnvqatg tiapnlvvis fqcddeamrf fkkrilride mernlladii
      121 iearhcfdcr lddpylqnmp qkepemfgae qliclylehf lihlirrysn pivlrkrpar
      181 ietpkstkqk sdteifnrvv dylenhisap vtieqickdn ligrsqlqki fkercnlgii
      241 eyfslmkvna akemirtnrm nftqiseqlg yssihyfsrq fkkvtgmtps eyassikama
      301 dgsfep
//
LOCUS       WP_235233679             259 aa            linear   BCT 02-MAR-2025
DEFINITION  glucosaminidase domain-containing protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235233679
VERSION     WP_235233679.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 259)
  AUTHORS   Nambu,T., Minamino,T., Macnab,R.M. and Kutsukake,K.
  TITLE     Peptidoglycan-hydrolyzing activity of the FlgJ protein, essential
            for flagellar rod formation in Salmonella typhimurium
  JOURNAL   J Bacteriol 181 (5), 1555-1561 (1999)
   PUBMED   10049388
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013954.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01832.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..259
                     /product="glucosaminidase domain-containing protein"
                     /GO_function="GO:0004040 - amidase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=28233
     Region          <5..152
                     /region_name="FlgJ"
                     /note="Flagellum-specific peptidoglycan hydrolase FlgJ
                     [Cell wall/membrane/envelope biogenesis, Cell motility];
                     COG1705"
                     /db_xref="CDD:441311"
     Region          189..256
                     /region_name="Cu_amine_oxidN1"
                     /note="Copper amine oxidase N-terminal domain; pfam07833"
                     /db_xref="CDD:400265"
ORIGIN      
        1 makltrnqff avlaptviri kregstmfps vrlaqnllet ggvihswnnl ggikvgsgqt
       61 naywhgeavv kgtweyidgr nastraafra yksvyhfykd ldlllampry arvrnaptpe
      121 sqaemlqacg yatdpayatk lksiierygl krydalgsrh vqkpeklkda iaipvvyegq
      181 visdgyllng vtwvparqlg ealgavidwt gtevtvngka ietilseatg yvkvrdlaae
      241 lelqaswdag asvvllgig
//
LOCUS       WP_235233729             416 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase family 18 protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235233729
VERSION     WP_235233729.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 416)
  AUTHORS   Perrakis,A., Tews,I., Dauter,Z., Oppenheim,A.B., Chet,I.,
            Wilson,K.S. and Vorgias,C.E.
  TITLE     Crystal structure of a bacterial chitinase at 2.3 A resolution
  JOURNAL   Structure 2 (12), 1169-1180 (1994)
   PUBMED   7704527
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00704.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..416
                     /product="glycosyl hydrolase family 18 protein"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=46342
     Region          46..>111
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          131..414
                     /region_name="GH18_chitinase-like"
                     /note="The GH18 (glycosyl hydrolase, family 18) type II
                     chitinases hydrolyze chitin, an abundant polymer of
                     beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a
                     major component of the cell wall of fungi and the
                     exoskeleton of arthropods. Chitinases have...; cl10447"
                     /db_xref="CDD:471972"
     Site            order(141,212,214,216,278..279,320,402)
                     /site_type="active"
                     /db_xref="CDD:119353"
ORIGIN      
        1 mniafrrmiv vlmfvvftwq aaagtadalg snmlngkplq tadyvtvakv thlsapvhvk
       61 alsgsakvat lkrgveypvi svakyhyqvq llggkkgwir ksyvsvrkan ryvsgwnylg
      121 gtdkfievsd iaaldvvmpr wyrlsqdglv stspdkryvd wahskgkkvw amlgngfdme
      181 ltdrvlsspa nrqeviskvk dsvlangidg invdfenmkl enreefvifi rdlkkslsag
      241 nklvsvdvtr enpdpnwsgs ydraglgkaa dyvimmgyde yyegrgeags vsslpwveeg
      301 lrlllkdvpa hkvilgvpfy trewtvpagg gkatskdvfm kdtdvwiser gltkkwdsvs
      361 rqnyveftdt agrhrlwved rismaarwsl vkkyslagis awaigqesad iwsvfk
//
LOCUS       WP_235233781            1052 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Faecalicatena contorta].
ACCESSION   WP_235233781
VERSION     WP_235233781.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 1052)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 1052)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 1052)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..1052
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=115383
     Region          648..>719
                     /region_name="NEAT"
                     /note="NEAr Transport domain, a component of cell surface
                     proteins; cl02760"
                     /db_xref="CDD:470669"
     Region          941..>1045
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
ORIGIN      
        1 mksntkkfla lllavamavm pvtslraees nvqgqenaen eqqeevaege edgqgntsea
       61 lqtvevpkve esaengqtse netvqqpend ttvqqsmesq ssnsqgnved dteefkvvks
      121 eakengekvs isvftaklty nkiyignked tvkepviegq kndlggytft fdvekeqlgq
      181 kilivpyyae knewyvekdv rleipeevea enidsdaeeg tfesakmtrq lpmlleaeas
      241 eetaktveli sgaeysttvd ssssmfnivs ckmtsengkv waditlsgts ytklfigtke
      301 eaagaeesqy igytenaegq yvfripvskl deplkvaays kkscdwfdre ltfssenlki
      361 ekipdgiyen vavessstmf nvvdctlfne ngtmqaaitl sgtgytklyv gtaeeaeqvt
      421 dyidyavdad gkyvftipvs glnteikiaa fskksqkwfd rilvfnpevn nlktlpdgty
      481 ddiivtssnk mfkviactls sengsmqaai tlsgtgytkl ymgsaeeaqt aenyieyteg
      541 adgryvftip vsglntdiei aalgskwydr tlvfswgtss ipcgvqeest dnpensggst
      601 gntgdtgnsg ssgstgssgg qnnnnpdses kyesdlsgst gkvnnttklk dgvytpdsft
      661 wsggtgrvsi sctkititng qayativfss pnygyvkang nkyyatvvgg tsvftipvel
      721 nknnqiigmt tamstaheva ynifiylaaa geadgktvlg sgmgsskkld eeapdilgle
      781 yedevtldya eyfkiykyeq gitlleidlv sgtvredaed eetekdskkk vesedetenv
      841 edddsaease etaldvqtqe eivaelyqen vvkylivpeg veipagldke vvviqqpvdk
      901 tyaasddile qleqmdmldq vaavaceedd ckidaiadkm ekeeisfagt yeepdfkkli
      961 stkcnlallp adilpqeeee dekedltvee qkerffeqve kyalldipvv idrsadeeee
     1021 laqkewvkiy gaifgceeka eelfhaaaia kk
//
LOCUS       WP_235233852            1143 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: glucosaminidase domain-containing protein
            [Lachnospiraceae].
ACCESSION   WP_235233852
VERSION     WP_235233852.1
KEYWORDS    RefSeq.
SOURCE      Lachnospiraceae
  ORGANISM  Lachnospiraceae
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales.
REFERENCE   1  (residues 1 to 1143)
  AUTHORS   Nambu,T., Minamino,T., Macnab,R.M. and Kutsukake,K.
  TITLE     Peptidoglycan-hydrolyzing activity of the FlgJ protein, essential
            for flagellar rod formation in Salmonella typhimurium
  JOURNAL   J Bacteriol 181 (5), 1555-1561 (1999)
   PUBMED   10049388
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013954.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01832.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1143
                     /organism="Lachnospiraceae"
                     /db_xref="taxon:186803"
     Protein         1..1143
                     /product="glucosaminidase domain-containing protein"
                     /GO_function="GO:0004040 - amidase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=127166
     Region          24..431
                     /region_name="LytD"
                     /note="Beta- N-acetylglucosaminidase [Carbohydrate
                     transport and metabolism]; COG4193"
                     /db_xref="CDD:443347"
     Region          446..519
                     /region_name="SH3_3"
                     /note="Bacterial SH3 domain; pfam08239"
                     /db_xref="CDD:462405"
     Region          545..589
                     /region_name="ChW"
                     /note="Clostridial hydrophobic, with a conserved W
                     residue, domain; smart00728"
                     /db_xref="CDD:214791"
     Region          591..625
                     /region_name="ChW"
                     /note="Clostridial hydrophobic W; pfam07538"
                     /db_xref="CDD:429523"
     Region          638..668
                     /region_name="ChW"
                     /note="Clostridial hydrophobic W; pfam07538"
                     /db_xref="CDD:429523"
     Region          697..728
                     /region_name="ChW"
                     /note="Clostridial hydrophobic W; pfam07538"
                     /db_xref="CDD:429523"
     Region          743..776
                     /region_name="ChW"
                     /note="Clostridial hydrophobic W; pfam07538"
                     /db_xref="CDD:429523"
     Region          789..821
                     /region_name="ChW"
                     /note="Clostridial hydrophobic W; pfam07538"
                     /db_xref="CDD:429523"
     Region          848..880
                     /region_name="ChW"
                     /note="Clostridial hydrophobic W; pfam07538"
                     /db_xref="CDD:429523"
     Region          895..928
                     /region_name="ChW"
                     /note="Clostridial hydrophobic W; pfam07538"
                     /db_xref="CDD:429523"
     Region          941..975
                     /region_name="ChW"
                     /note="Clostridial hydrophobic W; pfam07538"
                     /db_xref="CDD:429523"
     Region          1000..1034
                     /region_name="ChW"
                     /note="Clostridial hydrophobic W; pfam07538"
                     /db_xref="CDD:429523"
     Region          1046..1080
                     /region_name="ChW"
                     /note="Clostridial hydrophobic W; pfam07538"
                     /db_xref="CDD:429523"
     Region          1093..1127
                     /region_name="ChW"
                     /note="Clostridial hydrophobic W; pfam07538"
                     /db_xref="CDD:429523"
ORIGIN      
        1 msakrkkrcs lilcfmllwv gvlgnvsyad epeenytdie sikvsseees nsknsdveet
       61 evsdssneit kaeialqken iridsvittm daegniteve sesgylednv saytriatpq
      121 ivnfntrgna vteyteygtg nsgytngmfg adaaylgten gkvkfmisgv iglvdsslvq
      181 vvnissaqsi syyivsngrl yhyittnitk ndhatvldng papnylnage qyysydghyf
      241 ytqdnfgsml ddynqgsrny avnstdpyyn yfqylpmrsk tkysaeqidy iingkvtnsk
      301 mtntgsifen cqnqygvnvi lacavaanes awgkssiamn nnnlfglnai dsspgdsant
      361 yssvescikt fsetymskqy lnpenwvysg gflgnkgsgi nvryasdpyw geknaniawm
      421 idrtydnqdv yvysigikdl igiehtnlnv rnepnttskv ihttknysnq sfiilddtlr
      481 gfykiqsdav lnsdrtniln sgnynynemy ayvssdyvkk vigkssgnvs invpeelknv
      541 ieyrahvqei gwqdsvnngq vigtigknls ieaielkvkd inslgieyra hvqdigwqdi
      601 vsdgatsgtv glakkmeaiq irltgepsae ydiyyrtyvs efgwldwakn gelagtqnyn
      661 yalqamqivm lkkgsiapgn tlipykintq kieycahvqd igwqqkveng evagttgqnk
      721 kieaftvnsv lnndlgikyr afvqdigwmd yeengevsgt vgqnkrmeal qieltgndnn
      781 kydiyyrvhv qdkgwlgwas ngqtagtiny dlkieamqii llpkgtpelk ndvkeflqnp
      841 tvvrycthve digwqkyvkd gqmagttgkn kqieafkvql fgqeysgdiq ysalvenvgw
      901 qefvsnnsva gtvgenkqie avkiqltgem stkydvyyrv hasefgwlgw tknglpagnk
      961 gygkqieaiq iqlvnknesa pgttdnsfle keagiiysah vqdigwqdfv sdggiagttg
     1021 knkqieaiki hldnlnmsgd vkykahvqdv gwqdyvfggk iagtvgknkq veaicieltg
     1081 kvsenynvyy rvhasefgwl gwakngekag segyarqvea iqiklvkkee sfpcgnvpsf
     1141 fkk
//
LOCUS       WP_235233853             610 aa            linear   BCT 02-MAR-2025
DEFINITION  GBS Bsp-like repeat-containing protein [Faecalicatena contorta].
ACCESSION   WP_235233853
VERSION     WP_235233853.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 610)
  AUTHORS   Reinscheid,D.J., Stosser,C., Ehlert,K., Jack,R.W., Moller,K.,
            Eikmanns,B.J. and Chhatwal,G.S.
  TITLE     Influence of proteins Bsp and FemH on cell shape and peptidoglycan
            composition in group B streptococcus
  JOURNAL   Microbiology (Reading) 148 (Pt 10), 3245-3254 (2002)
   PUBMED   12368458
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020070.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08481.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..610
                     /product="GBS Bsp-like repeat-containing protein"
                     /calculated_mol_wt=68489
     Region          157..449
                     /region_name="LTA_synthase"
                     /note="Lipoteichoic acid synthase like; cd16015"
                     /db_xref="CDD:293739"
     Site            order(165,217,343,396..397)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293739"
     Site            order(165,217,343,397)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293739"
     Site            order(270,272..275,278)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:293739"
     Region          520..599
                     /region_name="GBS_Bsp-like"
                     /note="GBS Bsp-like repeat; pfam08481"
                     /db_xref="CDD:400671"
ORIGIN      
        1 mrkvlriikk vltvlgtvlt viltvlatil cfsiqwmfdt wsnltmdelv yhltapldgt
       61 negmimeyln tcvapailvl vlililfiaw rrkkkyyvvm gvgmiaslav siivvrgawt
      121 kldagsyvka qgeysdfidd yyvdpaevei tfpeqkrnli liflesmett yadtenggaf
      181 eenvipeltk laqenedfsg eedklnggys mpgttwtiga mfahtsglpl sisidgnnmd
      241 tqdsffpsai tlgdvlereg ysqtlligsd atfggrrlyf tehgnydivd ynyaiqsgmi
      301 pedyqvwwgy edqklfgfak ekllelssqe epfnltmltv dthfedgyvc dicpetygde
      361 qysnvmacss rqvcdfiqwv qeqdfyentt ivivgdhptm dvdycedidd dyirkvytsy
      421 insavvvetn eerdyttfdt fpttlaalga niesnrlglg tnlfstaqtl terlginavk
      481 egvsgkskrm eelasidetk eelllregkl pmanawaeay esntgalpvv vtdianiped
      541 isqvmiavwt nedqsdlqwi gmeqredgsy yarinvpgfg ykvgeyqihv yvvgedgeqy
      601 kvaetignvn
//
LOCUS       WP_235233876             154 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar basal body-associated FliL family protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235233876
VERSION     WP_235233876.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 154)
  AUTHORS   Tachiyama,S., Chan,K.L., Liu,X., Hathroubi,S., Peterson,B.,
            Khan,M.F., Ottemann,K.M., Liu,J. and Roujeinikova,A.
  TITLE     The flagellar motor protein FliL forms a scaffold of
            circumferentially positioned rings required for stator activation
  JOURNAL   Proc Natl Acad Sci U S A 119 (4) (2022)
   PUBMED   35046042
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2022 Apr 5;119(14):e2202702119.
            doi: 10.1073/pnas.2202702119.. PMID: 35363571]
REFERENCE   2  (residues 1 to 154)
  AUTHORS   Takekawa,N., Isumi,M., Terashima,H., Zhu,S., Nishino,Y., Sakuma,M.,
            Kojima,S., Homma,M. and Imada,K.
  TITLE     Structure of Vibrio FliL, a New Stomatin-like Protein That Assists
            the Bacterial Flagellar Motor Function
  JOURNAL   mBio 10 (2), e00292-19 (2019)
   PUBMED   30890608
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 154)
  AUTHORS   Schoenhals,G.J. and Macnab,R.M.
  TITLE     FliL is a membrane-associated component of the flagellar basal body
            of Salmonella
  JOURNAL   Microbiology (Reading) 145 (Pt 7), 1769-1775 (1999)
   PUBMED   10439416
REFERENCE   4  (residues 1 to 154)
  AUTHORS   Kuo,S.C. and Koshland,D.E. Jr.
  TITLE     Sequence of the flaA (cheC) locus of Escherichia coli and discovery
            of a new gene
  JOURNAL   J Bacteriol 166 (3), 1007-1012 (1986)
   PUBMED   3519573
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015693.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03748.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..154
                     /product="flagellar basal body-associated FliL family
                     protein"
                     /GO_component="GO:0009425 - bacterial-type flagellum basal
                     body [Evidence IEA]"
                     /GO_process="GO:0006935 - chemotaxis [Evidence IEA]"
                     /GO_process="GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /calculated_mol_wt=17542
     Region          1..151
                     /region_name="fliL"
                     /note="flagellar basal body-associated protein FliL;
                     Reviewed; cl00681"
                     /db_xref="CDD:469875"
ORIGIN      
        1 mkkmipwlit illaitliai vsiilfksff tdpkeqatet etievkvlta dervevtsel
       61 kdfrrnlkdp eyivvmsfaf qldskktked fdklleievr piinrtladm tadelkgsqg
      121 edafesrlln linpiipkgk lvkveitnfi itei
//
LOCUS       WP_235233963              91 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1284 domain-containing protein [Faecalicatena contorta].
ACCESSION   WP_235233963
VERSION     WP_235233963.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018621.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06935.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..91
                     /product="DUF1284 domain-containing protein"
                     /calculated_mol_wt=10186
     Region          12..>69
                     /region_name="DUF1284"
                     /note="Protein of unknown function (DUF1284); cl01419"
                     /db_xref="CDD:470196"
ORIGIN      
        1 mclssnqeaq aipirphhgm clayfigrgy segfsahmek mlgifqqnvp vklvvhtdei
       61 csrcpnneeh lwrlpveqyl qshakpvgvi v
//
LOCUS       WP_235234037            1759 aa            linear   BCT 02-MAR-2025
DEFINITION  SpaA isopeptide-forming pilin-related protein [Faecalicatena
            contorta].
ACCESSION   WP_235234037
VERSION     WP_235234037.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 1759)
  AUTHORS   Kang,H.J., Paterson,N.G., Gaspar,A.H., Ton-That,H. and Baker,E.N.
  TITLE     The Corynebacterium diphtheriae shaft pilin SpaA is built of tandem
            Ig-like modules with stabilizing isopeptide and disulfide bonds
  JOURNAL   Proc Natl Acad Sci U S A 106 (40), 16967-16971 (2009)
   PUBMED   19805181
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2009 Oct 27;106(43):18427]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037639.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17802.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1759
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..1759
                     /product="SpaA isopeptide-forming pilin-related protein"
                     /calculated_mol_wt=193980
     Region          467..612
                     /region_name="DUF11"
                     /note="Domain of unknown function DUF11; pfam01345"
                     /db_xref="CDD:460168"
     Region          1319..>1666
                     /region_name="ClfA"
                     /note="Clumping factor A-related surface protein, MSCRAMM
                     (microbial surface components recognizing adhesive matrix
                     molecules) family, DEv-IgG fold [Cell
                     wall/membrane/envelope biogenesis]; COG4932"
                     /db_xref="CDD:443959"
     Region          1719..1753
                     /region_name="LPXTG_anchor"
                     /note="LPXTG-motif cell wall anchor domain; TIGR01167"
                     /db_xref="CDD:273478"
ORIGIN      
        1 mfervrkqae kyikknkrkk lwykvvtcma avvifittym lilpaitmek ttncgleihq
       61 hskecydseq nlicgyadfv vhthdencyd qsgkllcdlp eveehehqas cyqeekklvc
      121 gqeeseghvh eddcyiskka dlictqeeht hsedcydeeg nliceraehe htddcyqwdk
      181 vlscekeesa ghthtedcyv tektlvceke evllhthtdk cmeegklvcg ktevlehqht
      241 eecypersdt eedtdkakdd vekdtaqdts eeeeseesdl ltaeahgmdv lsedevddvl
      301 dnteevteai nvspyitdae lkyrekgtsd wltikdatip gdadlrldvt yknvpletll
      361 snggkltytl psilrdpvan gevtsggktv gtitvennil titfdetwlr elqnggnttl
      421 dgtfyvesqi nlsevgeegk teiivgdvti eanfeseiis kygnvdvvks vepeiikted
      481 gdyleytltv tagidgcpdv kvvdtfsang nyvsyvglst tetaldssgs psetiadgma
      541 hgsiykdtts ieepgslvwv igdmaanevr tltyqvklek gytyiqnstn kvisneadvy
      601 skdnprdtdt anfepkatln mkksaseair needgsytit ytvwieaast nkfvlenvri
      661 edslnntana tfadslqyis yvddsfklfs nktatgeelq fekseeipnn palnsdkkgf
      721 vayvgdmeps svcciqyqvr vgleaigksg geklsvknra lvysdnakng knewlqaynn
      781 tktiqydhwa kklvgdplet deniaisgnv ydatgdtpvk essppdsfaa pagsycytvt
      841 vnelgdwdvt sasmkdtlgn qymqfvgyvk veaydpddnd avketiwvkv dgtqtfnftl
      901 qqlgisnnty ayrltyyakp vqiegvsqvv vantfqlsgd iiigdnvifi ltgieasaev
      961 tveggnsfea hksawyyega ktsegswsng alywaikvdg tdfkagtylq dyttnqsaml
     1021 frsdslvgif tgsfpdgtdl tdcsdvaeal kigtltaldn syytatlsns rnlngedafs
     1081 eltiqmnqtv tlgettsmyi ivklapafip nnrgswtynn ylkssdngtd wqdrgnaski
     1141 lyggsnilke lgttftydgk nivtktsdhg gtvfkeclpe pgyyvswavk vnfggdlsgr
     1201 yrivdqipdg meiayarikw rgseargtpg aqmiqitdlg pewtehtmhk aldgenalds
     1261 yyytngnqvc wevayliagg eediysvdfq vvcrvtdpev llggeskdfn nkailytegg
     1321 neldsdvngv aiststmeke ategesiipf tikvnplged llegtdtltv vdtlsdtlkl
     1381 dptsiavvnt ktqetvefta sqegqilkit vpdnqpltis ykakvqaapn ttvaiknday
     1441 wegyattggs sveikdysys vggtaggtgt pfveivkydq ndltsvlaga tftmqegtme
     1501 ngiftpstdd sriwtdttdd sgklkfgkep lmqyntvyqi tetvapngyv ldstpryfiv
     1561 akadedgryp dypdgvdihy gsstytceia nhkgeayvek kfedandgsv nkingtyrfg
     1621 iydneaasgs plqtvaitye nnsvtpedgk akftnlelgk tyyiyelddt dqpiknnmla
     1681 tvdkktfdvl ytngpeitis ndgespvtvt vtnkvhytsl pdtggggtlp ftmgglliia
     1741 agllygfsmr rkkgrrseg
//
LOCUS       WP_235234128             283 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235234128
VERSION     WP_235234128.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 283)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 283)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 283)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 283)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..283
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=30940
     Region          7..277
                     /region_name="ECF_ATPase_1"
                     /note="energy-coupling factor transporter ATPase;
                     TIGR04520"
                     /db_xref="CDD:275313"
ORIGIN      
        1 mepscqielk nisvtppvmv esqmpqpilk dvsfriqdge witllgqngs gkstlakvva
       61 gyrmagmtgq ivrgmktpfq grpipivmqq peaamigatp wedvvlmleq neldaeriti
      121 eaelvlrkvg lgerlhqpie tlsggqkqlv aiagclamhs pllvldevta mldpeaagfv
      181 ldqvralhqs gvtvvwitqk leelrqgdrv vamndgfivf dgqadewfar gaggvqisic
      241 eqlgfeapys aqvaweleke gvklspfpft aemlaeavkr yer
//
LOCUS       WP_235234152             126 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235234152
VERSION     WP_235234152.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 126)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 126)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..126
                     /product="VOC family protein"
                     /calculated_mol_wt=14463
     Region          7..122
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 miehegihhv slivsdleha kafyedvlgl rqierppfdf pgawyaigeh gqqlhlivhn
       61 getartrgid trdghfairv rdydrtiswl khrkieykan pdsitgfaqi fimdpdhnii
      121 elnars
//
LOCUS       WP_235234195             250 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: transposase [Lachnospiraceae].
ACCESSION   WP_235234195
VERSION     WP_235234195.1
KEYWORDS    RefSeq.
SOURCE      Lachnospiraceae
  ORGANISM  Lachnospiraceae
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales.
REFERENCE   1  (residues 1 to 250)
  AUTHORS   Vertes,A.A., Inui,M., Kobayashi,M., Kurusu,Y. and Yukawa,H.
  TITLE     Isolation and characterization of IS31831, a transposable element
            from Corynebacterium glutamicum
  JOURNAL   Mol Microbiol 11 (4), 739-746 (1994)
   PUBMED   8196545
REFERENCE   2  (residues 1 to 250)
  AUTHORS   van der Zee,A., Agterberg,C., van Agterveld,M., Peeters,M. and
            Mooi,F.R.
  TITLE     Characterization of IS1001, an insertion sequence element of
            Bordetella parapertussis
  JOURNAL   J Bacteriol 175 (1), 141-147 (1993)
   PUBMED   8093238
REFERENCE   3  (residues 1 to 250)
  AUTHORS   Johansen,E. and Kibenich,A.
  TITLE     Isolation and characterization of IS1165, an insertion sequence of
            Leuconostoc mesenteroides subsp. cremoris and other lactic acid
            bacteria
  JOURNAL   Plasmid 27 (3), 200-206 (1992)
   PUBMED   1325060
REFERENCE   4  (residues 1 to 250)
  AUTHORS   Cirillo,J.D., Barletta,R.G., Bloom,B.R. and Jacobs,W.R. Jr.
  TITLE     A novel transposon trap for mycobacteria: isolation and
            characterization of IS1096
  JOURNAL   J Bacteriol 173 (24), 7772-7780 (1991)
   PUBMED   1660454
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013753.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01610.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Lachnospiraceae"
                     /db_xref="taxon:186803"
     Protein         1..250
                     /product="transposase"
                     /calculated_mol_wt=28347
     Region          1..>96
                     /region_name="COG4584"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:443641"
     Region          <136..244
                     /region_name="COG3464"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442687"
ORIGIN      
        1 mhkqglgiae iarrtgkdig tvkkyregep iilcrhgrrg kskldpfrdi iieklkakih
       61 qadiirhite ngytgtktna qiyirklcee cnipaskyrs ggnslgtkrt gfkksmdady
      121 itragifnhi wmgieltdih kkflwdkydv lyeigacvse frtifgkkni sllylfiery
      181 kkstikeias fakglekdie avenavasdk sngfvegtns rlkmvkrtmy grcgrhllsa
      241 klmyrnatgt
//
LOCUS       WP_235234205             382 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3900 domain-containing protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235234205
VERSION     WP_235234205.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024439.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13039.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..382
                     /product="DUF3900 domain-containing protein"
                     /calculated_mol_wt=43806
     Region          6..257
                     /region_name="DUF3900"
                     /note="Protein of unknown function (DUF3900); pfam13039"
                     /db_xref="CDD:372442"
     Region          265..353
                     /region_name="DUF3898"
                     /note="Domain of unknown function (DUF3898); pfam13037"
                     /db_xref="CDD:404053"
ORIGIN      
        1 mdfqmqylsf fvihtdgees aassgkrfkh yqtldedtye dseiqkfldd efkrivkrkv
       61 ernpnsagap tkigrfmvep gyelgsnqny nlfqrlrdad skerfigiad elvriymdts
      121 avrggafiia lsklntyfde pflfllkcdf epkiarisde rnlisqvema isarsiksiq
      181 yphmpeegml ehwdlkihqa sharyfedfl kyvsyekplp evmgeqvvem vhqfiadkwq
      241 edesserree enavevwaas ekrdlqewws qeqvevaaaa lveqkpdlpf sfkldsvtik
      301 glladfgaai hfakhngryl aviegdsfqf dkgmspvell qpldlvdimp ligtkqppqe
      361 enpaqsyavt sesaasddev pw
//
LOCUS       WP_235233073              70 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: (2Fe-2S)-binding protein [Lachnospiraceae].
ACCESSION   WP_235233073
VERSION     WP_235233073.1
KEYWORDS    RefSeq.
SOURCE      Lachnospiraceae
  ORGANISM  Lachnospiraceae
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales.
REFERENCE   1  (residues 1 to 70)
  AUTHORS   Andrews,S.C.
  TITLE     Iron storage in bacteria
  JOURNAL   Adv Microb Physiol 40, 281-351 (1998)
   PUBMED   9889981
REFERENCE   2  (residues 1 to 70)
  AUTHORS   Quail,M.A., Jordan,P., Grogan,J.M., Butt,J.N., Lutz,M.,
            Thomson,A.J., Andrews,S.C. and Guest,J.R.
  TITLE     Spectroscopic and voltammetric characterisation of the
            bacterioferritin-associated ferredoxin of Escherichia coli
  JOURNAL   Biochem Biophys Res Commun 229 (2), 635-642 (1996)
   PUBMED   8954950
REFERENCE   3  (residues 1 to 70)
  AUTHORS   Garg,R.P., Vargo,C.J., Cui,X. and Kurtz,D.M. Jr.
  TITLE     A [2Fe-2S] protein encoded by an open reading frame upstream of the
            Escherichia coli bacterioferritin gene
  JOURNAL   Biochemistry 35 (20), 6297-6301 (1996)
   PUBMED   8639572
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016230.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04324.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Lachnospiraceae"
                     /db_xref="taxon:186803"
     Protein         1..70
                     /product="(2Fe-2S)-binding protein"
                     /calculated_mol_wt=7509
     Region          6..58
                     /region_name="Fer2_BFD-like"
                     /note="[2Fe-2S]-binding domain of
                     bacterioferritin-associated ferredoxin (BFD) and related
                     proteins; cl40433"
                     /db_xref="CDD:394803"
ORIGIN      
        1 mennelicyc dnvtkgeiia amdqgaktla dikrmtgacc sckcselnps gkccaqdial
       61 vmreyllskk
//
LOCUS       WP_235234344             233 aa            linear   BCT 02-MAR-2025
DEFINITION  phage antirepressor KilAC domain-containing protein [Mangrovibacter
            sp. MFB070].
ACCESSION   WP_235234344
VERSION     WP_235234344.1
KEYWORDS    RefSeq.
SOURCE      Mangrovibacter sp. MFB070
  ORGANISM  Mangrovibacter sp. MFB070
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Mangrovibacter.
REFERENCE   1  (residues 1 to 233)
  AUTHORS   Iyer,L.M., Koonin,E.V. and Aravind,L.
  TITLE     Extensive domain shuffling in transcription regulators of DNA
            viruses and implications for the origin of fungal APSES
            transcription factors
  JOURNAL   Genome Biol 3 (3), RESEARCH0012 (2002)
   PUBMED   11897024
REFERENCE   2  (residues 1 to 233)
  AUTHORS   Heinrich,J., Velleman,M. and Schuster,H.
  TITLE     The tripartite immunity system of phages P1 and P7
  JOURNAL   FEMS Microbiol Rev 17 (1-2), 121-126 (1995)
   PUBMED   7669337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015340.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03374.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Mangrovibacter sp. MFB070"
                     /db_xref="taxon:1224318"
     Protein         1..233
                     /product="phage antirepressor KilAC domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=26127
     Region          28..228
                     /region_name="KilAC"
                     /note="Phage antirepressor protein YoqD, KilAC domain
                     [Mobilome: prophages, transposons]; COG3645"
                     /db_xref="CDD:442862"
ORIGIN      
        1 msslmnvisd pgfpamssle iaglcekrhd hvmadirnml lqleiqspqf sgdyrddrgr
       61 sypcyhlprd lcltlvsgyn vvlrkrvidr wleleeakks pvpqslpeal rlaadlaeek
      121 qqlaekleaa apkvefvdry ctasgsmsfr qvakllnake pefrlflldn nimyrlggtl
      181 tphhqhialg rfevktgtsq tsnhafsqar ftakgikwvs glwiehvmkg saa
//
LOCUS       WP_235234348             291 aa            linear   BCT 02-MAR-2025
DEFINITION  DDE-type integrase/transposase/recombinase, partial [Faecalicatena
            contorta].
ACCESSION   WP_235234348
VERSION     WP_235234348.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 291)
  AUTHORS   Dyda,F., Hickman,A.B., Jenkins,T.M., Engelman,A., Craigie,R. and
            Davies,D.R.
  TITLE     Crystal structure of the catalytic domain of HIV-1 integrase:
            similarity to other polynucleotidyl transferases
  JOURNAL   Science 266 (5193), 1981-1986 (1994)
   PUBMED   7801124
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012870.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00665.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..>291
                     /product="DDE-type integrase/transposase/recombinase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          10..286
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 msilsqqkyq rqrmvkyaqk hsvtetairy rvsrktvykw isrydgtlas ledrshrpkt
       61 spgshteqel rqirrrlkky kwtdlllayq dliekdgytr syggfkrvvr rlkalkpdkk
      121 kkkkrklkpy qradypgqki qidvkyvpsy cvtdgrkyyq ytavdecsrw tyremydehs
      181 tysskdfllk liqhapfpir evqtdngcef tnrllviksk hltmfekale elgilyhriq
      241 iatprhngkv erqhrqdear fykqmrmynl edgrkqlavy qkksnnyikt c
//
LOCUS       WP_235234399             150 aa            linear   BCT 02-MAR-2025
DEFINITION  cyclophilin-like fold protein [Mangrovibacter sp. MFB070].
ACCESSION   WP_235234399
VERSION     WP_235234399.1
KEYWORDS    RefSeq.
SOURCE      Mangrovibacter sp. MFB070
  ORGANISM  Mangrovibacter sp. MFB070
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Mangrovibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037716.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18050.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Mangrovibacter sp. MFB070"
                     /db_xref="taxon:1224318"
     Protein         1..150
                     /product="cyclophilin-like fold protein"
                     /calculated_mol_wt=15928
     Region          30..148
                     /region_name="COG4925"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:443953"
ORIGIN      
        1 mrllttmais hlllswlfia lpasastalq gdtmklhiit nnqlitatln ttpaaqafak
       61 llpltltlkd yageekisdl pvrlptdgsp agtaahkgdi mvyapwgnla lfyknhgyaa
      121 glvklgqldn pdelpakpas ytarfelage
//
LOCUS       WP_235233734             362 aa            linear   BCT 02-MAR-2025
DEFINITION  cell wall hydrolase [Faecalicatena contorta].
ACCESSION   WP_235233734
VERSION     WP_235233734.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 362)
  AUTHORS   Boland,F.M., Atrih,A., Chirakkal,H., Foster,S.J. and Moir,A.
  TITLE     Complete spore-cortex hydrolysis during germination of Bacillus
            subtilis 168 requires SleB and YpeB
  JOURNAL   Microbiology (Reading) 146 (Pt 1), 57-64 (2000)
   PUBMED   10658652
REFERENCE   2  (residues 1 to 362)
  AUTHORS   Ishikawa,S., Yamane,K. and Sekiguchi,J.
  TITLE     Regulation and characterization of a newly deduced cell wall
            hydrolase gene (cwlJ) which affects germination of Bacillus
            subtilis spores
  JOURNAL   J Bacteriol 180 (6), 1375-1380 (1998)
   PUBMED   9515903
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019128.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07486.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..362
                     /product="cell wall hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=38615
     Region          19..359
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     Region          247..362
                     /region_name="CwlJ"
                     /note="Cell wall hydrolase CwlJ, involved in spore
                     germination [Cell cycle control, cell division, chromosome
                     partitioning, Cell wall/membrane/envelope biogenesis];
                     COG3773"
                     /db_xref="CDD:442987"
ORIGIN      
        1 minpkkqril rsliaiaist vtiastnipv faapsadele ittgglqdql ddlnsqlsal
       61 saeldsaaaq iedlsaevek akldlaaaql neelqydsmk drikfmyegg nvsllqilfs
      121 sedmadflnk aeyvstisey drhmldelke vrvnvekkqe dltakqeela qmqsdltake
      181 eelnskiast sgqlddykeq ldraraaeea sktaqnnqia gsvtspgngd qnnngssgst
      241 tnggnpidas tsdvalfaal lqceagnsyd gmlavatvim nrvaspsyps tlrgviyqsg
      301 qfsptwngsl ervlakgpss taysvaqaal ggarhsavih cynfnyagsg vqginiggnv
      361 fy
//
LOCUS       WP_235234421             250 aa            linear   BCT 02-MAR-2025
DEFINITION  methylenetetrahydrofolate reductase [Paenibacillus alkaliterrae].
ACCESSION   WP_235234421
VERSION     WP_235234421.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 250)
  AUTHORS   Guenther,B.D., Sheppard,C.A., Tran,P., Rozen,R., Matthews,R.G. and
            Ludwig,M.L.
  TITLE     The structure and properties of methylenetetrahydrofolate reductase
            from Escherichia coli suggest how folate ameliorates human
            hyperhomocysteinemia
  JOURNAL   Nat Struct Biol 6 (4), 359-365 (1999)
   PUBMED   10201405
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02219.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..250
                     /product="methylenetetrahydrofolate reductase"
                     /EC_number="1.5.1.20"
                     /GO_function="GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA]"
                     /GO_process="GO:0006555 - methionine metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=29231
     Region          3..>204
                     /region_name="MTHFR"
                     /note="Methylenetetrahydrofolate reductase (MTHFR).
                     5,10-Methylenetetrahydrofolate is reduced to
                     5-methyltetrahydrofolate by methylenetetrahydrofolate
                     reductase, a cytoplasmic, NAD(P)-dependent enzyme.
                     5-methyltetrahydrofolate is utilized by methionine
                     synthase...; cl00246"
                     /db_xref="CDD:444783"
     Site            order(36,61,90..92,106..107,124,128,130,137,140,143..144,
                     153,155)
                     /site_type="other"
                     /note="FAD binding site [chemical binding]"
                     /db_xref="CDD:238299"
ORIGIN      
        1 mrislelipr dreelraelq ltkarfpsin tinipdltrf dfrsweavgl skayfensip
       61 hiramdfdag epfhiidyld thhiseilvv tgdapknshh rvyptscidl iskikrehph
      121 ikvysaldpy rgsirdeyey vqrklaagtd gfftqpyfdl rlmelyadml egteifwgvs
      181 pvvsdksrry wetrnnvvfp kdfkptldwn iefsrqaltf teqsksniyf mpikvdlsay
      241 fkgvfnevyv
//
LOCUS       WP_235234465             160 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Paenibacillus alkaliterrae].
ACCESSION   WP_235234465
VERSION     WP_235234465.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024935.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13546.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..160
                     /product="transposase"
                     /calculated_mol_wt=18708
     Region          19..>157
                     /region_name="transpos_IS701"
                     /note="IS701 family transposase; NF033540"
                     /db_xref="CDD:468071"
ORIGIN      
        1 mvfvhvaivk filslqmgfs kpqirhlisi vngiilcegr knistireaa gkerhlsstt
       61 rflnespwsv nhlqkqrmer imqsirkqtr nrgkrivyll lydtsckkes ttrrmegldf
      121 hyshengksv wshcivtmhv vtegqsfagd yrpyfrekyy
//
LOCUS       WP_235234593             396 aa            linear   BCT 02-MAR-2025
DEFINITION  MASE1 domain-containing protein [Mangrovibacter sp. MFB070].
ACCESSION   WP_235234593
VERSION     WP_235234593.1
KEYWORDS    RefSeq.
SOURCE      Mangrovibacter sp. MFB070
  ORGANISM  Mangrovibacter sp. MFB070
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Mangrovibacter.
REFERENCE   1  (residues 1 to 396)
  AUTHORS   Pfiffer,V., Sarenko,O., Possling,A. and Hengge,R.
  TITLE     Genetic dissection of Escherichia coli's master diguanylate cyclase
            DgcE: Role of the N-terminal MASE1 domain and direct signal input
            from a GTPase partner system
  JOURNAL   PLoS Genet 15 (4), e1008059 (2019)
   PUBMED   31022167
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 396)
  AUTHORS   Lacey,M., Agasing,A., Lowry,R. and Green,J.
  TITLE     Identification of the YfgF MASE1 domain as a modulator of bacterial
            responses to aspartate
  JOURNAL   Open Biol 3 (6), 130046 (2013)
   PUBMED   23740576
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 396)
  AUTHORS   Nikolskaya,A.N., Mulkidjanian,A.Y., Beech,I.B. and Galperin,M.Y.
  TITLE     MASE1 and MASE2: two novel integral membrane sensory domains
  JOURNAL   J Mol Microbiol Biotechnol 5 (1), 11-16 (2003)
   PUBMED   12673057
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05231.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Mangrovibacter sp. MFB070"
                     /db_xref="taxon:1224318"
     Protein         1..396
                     /product="MASE1 domain-containing protein"
                     /calculated_mol_wt=45897
     Region          29..318
                     /region_name="MASE1"
                     /note="pfam05231"
                     /db_xref="CDD:428383"
     Region          326..>391
                     /region_name="Nucleotidyl_cyc_III"
                     /note="Class III nucleotidyl cyclases; cl11967"
                     /db_xref="CDD:448371"
ORIGIN      
        1 mkswyqrnkn qwwalpgllp lfllplaawc ntftvlddgr tvlyylphal fmalmlifdw
       61 aalpgialai fvryfpgygl sytlnaillm vgplalcwfg yrvfvwrryr vifgslsltf
      121 srcmwlvliy ssiflvwyql avflgfldgy yslngaepln irtlinfqsl mvgtisgmpl
      181 cyfiirairn psfcrifwlr lkkqfhphvh lpeiltwffl tgvlvalmvs kpgpsstifn
      241 tsytftlllp lmlwaamrfg ylfittvwgi slivlcryfg nyvpdgedfa lqlaitsscw
      301 mvfsftialm aamttrqrav ffhvrqlali dpvfqlhnlr altrdtskya ssllcfirip
      361 eleilgrnyg llfrihykqh lgmylsqslr enrksv
//
LOCUS       WP_235234668             451 aa            linear   BCT 02-MAR-2025
DEFINITION  DRTGG domain-containing protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235234668
VERSION     WP_235234668.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018753.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07085.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..451
                     /product="DRTGG domain-containing protein"
                     /calculated_mol_wt=49417
     Region          12..68
                     /region_name="HTH_ARSR"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; cl46857"
                     /db_xref="CDD:481197"
     Site            order(12,14,32..33,41..45,47..48,51,61..62,64..67)
                     /site_type="DNA binding"
                     /note="DNA-binding site [nucleotide binding]"
                     /db_xref="CDD:153418"
     Region          85..187
                     /region_name="DRTGG"
                     /note="DRTGG domain; pfam07085"
                     /db_xref="CDD:429285"
     Region          209..314
                     /region_name="CBS_pair_DRTGG_assoc"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains associated with the DRTGG
                     domain; cd04596"
                     /db_xref="CDD:341371"
     Site            order(209..211,233..235,292,305,307,309..310,313)
                     /site_type="other"
                     /note="putative ligand binding site II [chemical binding]"
                     /db_xref="CDD:341371"
     Region          209..265
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341371"
     Site            order(233,246,250..251,254,270,292..294,309)
                     /site_type="other"
                     /note="putative ligand binding site I [chemical binding]"
                     /db_xref="CDD:341371"
     Region          270..313
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341371"
     Region          355..444
                     /region_name="hot_dog"
                     /note="The hotdog fold was initially identified in the E.
                     coli FabA (beta-hydroxydecanoyl-acyl carrier protein
                     (ACP)-dehydratase) structure and subsequently in 4HBT
                     (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A
                     number of other seemingly unrelated...; cd03440"
                     /db_xref="CDD:239524"
     Site            order(368..369,401..404)
                     /site_type="active"
                     /note="active site 2 [active]"
                     /db_xref="CDD:239524"
     Site            order(374,377..378,381,394..395)
                     /site_type="active"
                     /note="active site 1 [active]"
                     /db_xref="CDD:239524"
ORIGIN      
        1 maligpgnet stkheqilhy iqglkigtki svraiakals vsegtaykaf keaeniglvs
       61 tkerigtvri drkrrealdq ltfgevadiv egklfggasg ldktlhkfvi gameldamlr
      121 yidesslliv gnrvgahrca leegagvlit ggfepsaevi kladerslpi lssrhdtftv
      181 asminramyd rlikrkimli edivtfsrpa dvlrtgqtia dfhklsretg ysrfpvvder
      241 srvvgmmtak davgspedsa vdklmtkqpi taapnitvts aahmmagegi dllpivdrhr
      301 kllglvtrqe vldamrfagk qpesgetfed lmwtgfmafr gsagqdelgi aykgtitpqm
      361 sgslgmvseg llatlmtqaa rrmiretarr dyllesmtty fvrpvqidse itiipkalem
      421 srkftkleie vidtqglaak amltaqmidp y
//
LOCUS       WP_235234729             247 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Paenibacillus alkaliterrae].
ACCESSION   WP_235234729
VERSION     WP_235234729.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 247)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..247
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=27109
     Site            order(9,15,24,27..28,31,33..34,56,62,73..74,77,84..93,96,
                     103..111,113,115,118,121..122,125..126)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381152"
     Region          11..247
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
ORIGIN      
        1 mkandkplyk vvlieddpmv qevnrlfveq vqgfqvvgia gngndglqlv relspnlvfl
       61 dvfmpslggi etlqrlrtma lpvevvavta akdaetirtm lrngafdyii kpfklervkq
      121 tleryrllhe acteapsvtq deldrllhka nsgvedvpae srvaaaapsn vqddlpkgln
      181 aatlkqvlhv mqlhdgglsa eeaadgvgia rvtarryldy lektgrvklk iiyggvgrpv
      241 nryvlkp
//
LOCUS       WP_235234928            1001 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Fusobacterium perfoetens].
ACCESSION   WP_235234928
VERSION     WP_235234928.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024867.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13476.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..1001
                     /product="AAA family ATPase"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /GO_process="GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /calculated_mol_wt=116186
     Region          1..986
                     /region_name="sbcc"
                     /note="exonuclease SbcC; TIGR00618"
                     /db_xref="CDD:129705"
ORIGIN      
        1 mkplflsieg lqsfqekqei dfekigrdgl fgifgptgsg kstiidgmtl alygniirfk
       61 tnkdnenrdf fdaeainkns dqakvnfkfk vgeniyrver nykigkksgk vtktailfki
      121 dnnqeiklae nykdiyrevk enilgltled ftrsvvlpqg nfsqflklsg nekrdmleri
      181 fnlekygeml skkanahkye leaklknlni eltaigfnqd elknktiele nlkkeniklk
      241 qeektikasl qdmeetkrle iklselniqk nkldnqaeyi knleikknma ekfipvieki
      301 hkkndyeenl kilndeised nnkfeqgkmm lekekilysn lekeesilek ekeenhisqe
      361 eilkvsdeyr nslrrkelne kintlnsele ilnkdkknis dkteelkiii kklesekesi
      421 keisqdeiin iekslieken ilknlelrkk ewekitsdik llnnsiaekk eklyelenae
      481 ktytadrkny fihelekelh egdkcpvcng iyhrhnsfte nisfneeefe niqknirtlk
      541 ssleiseeki knyntdlkni saeissinqi kneinilkdk kenlnklnqk nksqvsyfek
      601 elkekssils kyevsygkne sevsiknlsl nelkkslesi sispfsleel qknlealkia
      661 sekssaadkk lneirkrkke iydekitvwt ekikifetkl iqkketykni asehlklsee
      721 innvllenki sdlqyiniie nsinkieemk deiekyknns isilnmildy keqlgnrsfs
      781 kekfenlsec gkivdvslel nikaigevtk sieifnankk raeeilkeke ntekkldpak
      841 emvellkgrk fldflsagkl qsitriasdt lqkitngryr invdeksdfs iidnfnsair
      901 kpqslsgget fmvslclala lanqiqlrgk skleffflde gfgtldsell eivfsvlenl
      961 raegmtvgii thveeiknrv trklmvtpak vgisgtivke i
//
LOCUS       WP_235234933             340 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Fusobacterium
            perfoetens].
ACCESSION   WP_235234933
VERSION     WP_235234933.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 340)
  AUTHORS   Coquille,S., Roux,C., Fitzpatrick,T.B. and Thore,S.
  TITLE     The last piece in the vitamin B1 biosynthesis puzzle: structural
            and functional insight into yeast
            4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate (HMP-P)
            synthase
  JOURNAL   J Biol Chem 287 (50), 42333-42343 (2012)
   PUBMED   23048037
REFERENCE   2  (residues 1 to 340)
  AUTHORS   Wightman,R. and Meacock,P.A.
  TITLE     The THI5 gene family of Saccharomyces cerevisiae: distribution of
            homologues among the hemiascomycetes and functional redundancy in
            the aerobic biosynthesis of thiamin from pyridoxine
  JOURNAL   Microbiology (Reading) 149 (Pt 6), 1447-1460 (2003)
   PUBMED   12777485
REFERENCE   3  (residues 1 to 340)
  AUTHORS   Rodriguez-Navarro,S., Llorente,B., Rodriguez-Manzaneque,M.T.,
            Ramne,A., Uber,G., Marchesan,D., Dujon,B., Herrero,E.,
            Sunnerhagen,P. and Perez-Ortin,J.E.
  TITLE     Functional analysis of yeast gene families involved in metabolism
            of vitamins B1 and B6
  JOURNAL   Yeast 19 (14), 1261-1276 (2002)
   PUBMED   12271461
REFERENCE   4  (residues 1 to 340)
  AUTHORS   Maundrell,K.
  TITLE     nmt1 of fission yeast. A highly transcribed gene completely
            repressed by thiamine
  JOURNAL   J Biol Chem 265 (19), 10857-10864 (1990)
   PUBMED   2358444
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020650.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09084.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..340
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=38425
     Region          38..252
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 merlmrlkvl fvsllafvfl vgctsekepv keekpletvd vvldwypnal ysfiyvamek
       61 gyfeeegikv nihfpanasd plaltaakka digfyflhhl vmaranenip vkaigvvvkk
      121 pltvvmslke nnitrpkdle gklvgysggp ltegtldtmv lkdggdpskv evldigfell
      181 tgmitkkvda tigglinhev pvmlekgfei nyfypseygv pdyyenllva ndelieerkd
      241 vytkflkaca rgaedmknnp eesldillsk qaaeqfplsr svekqstdil lsfmfngdtp
      301 flyqekevwe knidwlydqk iikrkidaee mfvnllplne
//
LOCUS       WP_235234972             720 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Fusobacterium perfoetens].
ACCESSION   WP_235234972
VERSION     WP_235234972.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 720)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 720)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019348.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07728.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..720
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=84197
     Region          277..>391
                     /region_name="COG4127"
                     /note="Predicted restriction endonuclease, Mrr-cat
                     superfamily [General function prediction only]"
                     /db_xref="CDD:443303"
     Region          <440..711
                     /region_name="PRK11331"
                     /note="5-methylcytosine-specific restriction enzyme
                     subunit McrB; Provisional"
                     /db_xref="CDD:183088"
ORIGIN      
        1 meikicldwi dfymeladkl lpykndrktl iekikniyfn inmrlpklek dnnlvdidpf
       61 tifglfnkgi tktnrisilq gfaqefsika pvpnffdgip vlnnmaatfy yfigdrqend
      121 ienlwkifal aleyadtnsd nnkkefitiy dtvsqqkgir wnltmalywi rpykyinlds
      181 rnrwyisnpe nmpadyiksi gsfetvptge eylsiidkss salekgnyhy knfpelscya
      241 wvisekvnqe iraaeveksr tnigeaigdk diqtvhywiy spgnnaymwd dfyddgimai
      301 gwgeignltn fttkdamkqk mkecfdptls yknaahatwq fvnemkpgdi vfvkkgmhri
      361 igkgvvtsdy ifdssrkddy knirqinwth kgdwehpgqa vlkaltditp ytdyveqlna
      421 ifedevieet eeteiqfpiy tkddflnevy mseanycllv nllrnkknii mqgapgvgkt
      481 faakrlaysm mkvkdpsrvm miqfhqsysy edfimgfrpa atgfelkkgp fynfckkael
      541 dlendyyfii deinrgnlsk ifgelfmlie sdkrgvalql lysdekfsvp envyiigmmn
      601 tadrslamld yalrrrfaff efspafetvg fhqyrqeknn kkfdnlivvi eklniaiend
      661 eslgrgfrig hsyfctdkdi ndmwlnavit yeiipllney wfdepskvqe wkfilyeair
//
LOCUS       WP_235235048             397 aa            linear   BCT 02-MAR-2025
DEFINITION  YadA-like family protein [Fusobacterium perfoetens].
ACCESSION   WP_235235048
VERSION     WP_235235048.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 397)
  AUTHORS   Sandt,C.H. and Hill,C.W.
  TITLE     Nonimmune binding of human immunoglobulin A (IgA) and IgG Fc by
            distinct sequence segments of the EibF cell surface protein of
            Escherichia coli
  JOURNAL   Infect Immun 69 (12), 7293-7303 (2001)
   PUBMED   11705900
REFERENCE   2  (residues 1 to 397)
  AUTHORS   Hoiczyk,E., Roggenkamp,A., Reichenbecher,M., Lupas,A. and
            Heesemann,J.
  TITLE     Structure and sequence analysis of Yersinia YadA and Moraxella
            UspAs reveal a novel class of adhesins
  JOURNAL   EMBO J 19 (22), 5989-5999 (2000)
   PUBMED   11080146
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015831.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03895.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..397
                     /product="YadA-like family protein"
                     /calculated_mol_wt=43974
     Region          <70..>320
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          333..394
                     /region_name="YadA_anchor"
                     /note="YadA-like membrane anchor domain; pfam03895"
                     /db_xref="CDD:427576"
ORIGIN      
        1 mkkkfsllll sfifitettl sigtelenlg psskvtqhkp skwiffpssk llsndltntq
       61 nvvnshsdli dkhtefltdi nskaqelenk vteheknvkt ateninnins kleninikie
      121 snqkniisnt snistnsqni qknnntiqen tkkinlisnd ikaikenenn ieknskfist
      181 nsenikkeid drqksesvin nkissntvsi snntksieen snkitknsta ineireknis
      241 nnkkisdnsd aiasnskkit enekniknia slqsqtsvht qtltdheeri saqeaeimnn
      301 rakledlder vsnldnkvnr gmslmaamta idfqdvrpge igigagvghf ensqgvalgi
      361 afspaenikl nakysvstdd vktssigvgg svrfkir
//
LOCUS       WP_235235091             289 aa            linear   BCT 02-MAR-2025
DEFINITION  sporulation protein YpjB [Paenibacillus alkaliterrae].
ACCESSION   WP_235235091
VERSION     WP_235235091.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 289)
  AUTHORS   Eichenberger,P., Jensen,S.T., Conlon,E.M., van Ooij,C.,
            Silvaggi,J., Gonzalez-Pastor,J.E., Fujita,M., Ben-Yehuda,S.,
            Stragier,P., Liu,J.S. and Losick,R.
  TITLE     The sigmaE regulon and the identification of additional sporulation
            genes in Bacillus subtilis
  JOURNAL   J Mol Biol 327 (5), 945-972 (2003)
   PUBMED   12662922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021117.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09577.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..289
                     /product="sporulation protein YpjB"
                     /calculated_mol_wt=32032
     Region          <108..279
                     /region_name="Spore_YpjB"
                     /note="Sporulation protein YpjB (SpoYpjB); cl23899"
                     /db_xref="CDD:329159"
ORIGIN      
        1 mkvrfiipfi icivmmigsa gavwgnasll sqyspvlssg pykqltrmde lasslyqaay
       61 tnnrqagyvq vqqlqrileg elkysagmpe gwrvmeqdar fieqtlisga ttadwlmeaa
      121 rlrlatdalv rpehalwlqy enimlddlsr vekawkrqtg dgaiaaraam nslqkhaeri
      181 epsiammygi mhgselmeri rytnqllesk slsalnadmv thslkslkea itrvydqggr
      241 advlpavapl gaanplswtl flgaiisavl tysgwrkykt npfgvkpls
//
LOCUS       WP_235235101             181 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235235101
VERSION     WP_235235101.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 181)
  AUTHORS   Das,A.K., Cohen,P.W. and Barford,D.
  TITLE     The structure of the tetratricopeptide repeats of protein
            phosphatase 5: implications for TPR-mediated protein-protein
            interactions
  JOURNAL   EMBO J 17 (5), 1192-1199 (1998)
   PUBMED   9482716
REFERENCE   2  (residues 1 to 181)
  AUTHORS   Lamb,J.R., Tugendreich,S. and Hieter,P.
  TITLE     Tetratrico peptide repeat interactions: to TPR or not to TPR?
  JOURNAL   Trends Biochem Sci 20 (7), 257-259 (1995)
   PUBMED   7667876
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019339.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07719.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..181
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=20721
     Site            order(4,7..8,11..12,14,38,41..42,45..46,48..49,72,75..76)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          4..31
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          18..>159
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          36..66
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          117..147
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          152..177
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mdgescikka yefifnsdfe qaiywfeqai aaepenasyy hkcavscars gkwtkakqya
       61 esalrldpeq keyqyhmqtv easlllsead lllasvpprl seaaellkrv vvldplsfda
      121 fytlgviyas lnqleeavvn areavrldps hsaarrlfad vnrkrrmlrd rikarkrkri
      181 r
//
LOCUS       WP_235235238             480 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramoyl-L-alanine amidase [Paenibacillus alkaliterrae].
ACCESSION   WP_235235238
VERSION     WP_235235238.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 480)
  AUTHORS   Kuroda,A., Sugimoto,Y., Funahashi,T. and Sekiguchi,J.
  TITLE     Genetic structure, isolation and characterization of a Bacillus
            licheniformis cell wall hydrolase
  JOURNAL   Mol Gen Genet 234 (1), 129-137 (1992)
   PUBMED   1495475
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013670.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01520.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..480
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /EC_number="3.5.1.28"
                     /GO_function="GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=53101
     Region          47..139
                     /region_name="Cu_amine_oxidN1"
                     /note="Copper amine oxidase N-terminal domain; pfam07833"
                     /db_xref="CDD:400265"
     Region          306..478
                     /region_name="AmiC"
                     /note="N-acetylmuramoyl-L-alanine amidase [Cell
                     wall/membrane/envelope biogenesis]; COG0860"
                     /db_xref="CDD:440621"
ORIGIN      
        1 mkrfvsmllf msvfftmfaa vghaaqivpk lylngqplts dvnpqivnes tivpvrtise
       61 glgypiewdn atktvtvyng qaviklklnd svakvndqqv qmdtpasivk gttlvplrfi
      121 geqfgldfew kqaekevhiy ekpmepevpt spevpkesee ttgwitqvsf dgisslkiny
      181 agsvttkepl fldnpkrivf dlpntvysne lnnlfakgqv esivadnpfl qkfryslfsn
      241 spsvarlvle vsedtgfims esvgeirfdl lpanevpqep iepppvvvdp pvtepvapad
      301 dgifdivida ghggkdpgai svlkrtekef nlsialkiqa llnketnima hltrsddtfv
      361 elvdrvkfae dlkadlfisv hanrvenfsv tgtetfynra askpfadvih khllaatglk
      421 nrgvkegpyk virettmpai lleagflsnk tdakllydek vqdriaseiv agikeylklk
//
LOCUS       WP_235235283             288 aa            linear   BCT 02-MAR-2025
DEFINITION  class I SAM-dependent methyltransferase [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235235283
VERSION     WP_235235283.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 288)
  AUTHORS   Martin,J.L. and McMillan,F.M.
  TITLE     SAM (dependent) I AM: the S-adenosylmethionine-dependent
            methyltransferase fold
  JOURNAL   Curr Opin Struct Biol 12 (6), 783-793 (2002)
   PUBMED   12504684
  REMARK    Erratum:[Curr Opin Struct Biol. 2003 Feb;13(1):142]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022137.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10672.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..288
                     /product="class I SAM-dependent methyltransferase"
                     /EC_number="2.1.1.-"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=32302
     Region          <69..>198
                     /region_name="RlmK"
                     /note="23S rRNA G2069 N7-methylase RlmK or C1962
                     C5-methylase RlmI [Translation, ribosomal structure and
                     biogenesis]; COG1092"
                     /db_xref="CDD:440709"
ORIGIN      
        1 myiadkwvey evidtgdgdk lerwgqytlr rpdpqiiwpi enetglwkka dghyhrsnag
       61 ggqwqmspal perwtisyge lnfhikptnf khtglfpeqa vnwswmmdki rsagrpirvl
      121 nlfaysggat vaaaaagaev chvdaakgmv qwakenaqls glesahiryi tddvfkfvqr
      181 eqrrgkqyda iimdppsygr gpngetwkle enlfpflqsc ttilsdqplf llinsyttgl
      241 spsvlhnllh mtmnakygge incgeiglpi tksglnlpcg ilgrwesk
//
LOCUS       WP_235235295             113 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2023 family protein [Fusobacterium perfoetens].
ACCESSION   WP_235235295
VERSION     WP_235235295.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021172.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09633.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..113
                     /product="DUF2023 family protein"
                     /calculated_mol_wt=13129
     Region          12..110
                     /region_name="DUF2023"
                     /note="Protein of unknown function (DUF2023); pfam09633"
                     /db_xref="CDD:430727"
ORIGIN      
        1 mssekrnels vffhmlyeln kglrnlallt ttvenrelie drlekcgyec iieelksgyi
       61 niffgikepi dvlkkfkkns lkdftpeedf ilgillgynt nqqckryltr kag
//
LOCUS       WP_235235361             995 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein [Fusobacterium perfoetens].
ACCESSION   WP_235235361
VERSION     WP_235235361.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 995)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..995
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..995
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=117512
     Region          158..411
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Region          <338..597
                     /region_name="COG3972"
                     /note="Superfamily I DNA and RNA helicases [Replication,
                     recombination and repair]"
                     /db_xref="CDD:443172"
     Region          <794..979
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          888..919
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          921..952
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
ORIGIN      
        1 mkflirdnff ksipkekidi vsgnlkyfye eieknsknik eipkgfwikk lagvknrfef
       61 rvnngdriff sfskrgdeee kitfllyssh drgvknskra eiqsvkdfei fkddfepspi
      121 eeidksvfln ynnvityeik ndnffifnrd nkyfyyylnd eqyetiisps plfvigsags
      181 gkstitlrki lnieehndvy gfkkvgyftg nsylkdnlee qyyffrdknk kalssfytlk
      241 efyrkelgid trkiidfrkf meflsfsypn rkklkvedsn iyfeiigiik gimgkggadn
      301 wekdilnpli sleeyknlsk kysvlsssqk eeiykialky eewkkennly dvndlaaagt
      361 kiqekfdfil vdevqdltet eiyflsnlvk tpeniifagd ihqmvnfnsf sfdrlknlyy
      421 knnmryslst lvknyrsske ivklanyltd lrkkyignlg mddykegavl degniifskt
      481 dfsfaenfqk dvnaaiivsd dderkkfsea sgikhriftv eeikgleyrd viccnliskn
      541 lwawkkilsg nvkqdqryrk yfnlfyvgit rarknliime evseanellk niksfmnike
      601 ekevnkdkii knnsfsskee wisegiklyk lekfdeaqya feqgdyptwi aeketeidie
      661 ngdyktaiek iekgnfkksr iyfekliidn iiekenyika lkylesfals ykyfeikrki
      721 seginkglys vkeinkiipm flnrreftiv gdsyfyikky dlainfykka sntegvirar
      781 reflkekfnd idkrderiqi venyigkkdi ntadrqgktp lmnimindkp ketaemllsl
      841 glnihekinl gsvtghyihl tqmilqdkig wlkflykkga dvnsessrke tplfyagife
      901 dmpsveflle hgadinhtdt ngetvdfkka rerrvkyfkf fiermdkpdk lnkqgeniln
      961 ileemkeafi snekelrkis lmekiykrav ekntk
//
LOCUS       WP_235235403             555 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235235403
VERSION     WP_235235403.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 555)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 555)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 555)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 555)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..555
                     /product="ATP-binding protein"
                     /calculated_mol_wt=62585
     Region          <199..546
                     /region_name="KinE"
                     /note="Sporulation sensor histidine kinase E [Cell cycle
                     control, cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG5809"
                     /db_xref="CDD:444511"
ORIGIN      
        1 mlkelllqfv vsllpifafq lwhdkeqgwk gttvfmcifc svsmalcmmt apnifgyevd
       61 frlipymigs lyggfpalav ltlvyvtmri pmldstwetv sfiifvagfv pliflsigpf
      121 rrasalrker yglqlmsllm lyfivtitgf isvseekwsf fmvvalilav satltstwls
      181 iymiesvkek qqlheevtrl stnyrnevek lqqlidetaf aviivnnegr ithfnkmate
      241 llslhpaykd awqligvpfp ivfqgpedac vnmlrqalmg tratslpfvi rdkillktsf
      301 slrsshnnei agaaliahdv teisqlrdev grmerlslvg qmaasithei rnpmavirgf
      361 vqliqerspk nqqeyfrivm eeldranmii sdflslaqnr alkmevsslh diinelipll
      421 nadsnlrgqs ievslcrdmp llmlndreik qmllnlarng meamdgkgvl ristslmsdk
      481 ielriadegv ginpdkmkhl fepffttksh gtglglplcl siaerhngri dvestegegt
      541 tfivtfflpk aplck
//
LOCUS       WP_235235424             356 aa            linear   BCT 02-MAR-2025
DEFINITION  alanine racemase [Fusobacterium perfoetens].
ACCESSION   WP_235235424
VERSION     WP_235235424.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 356)
  AUTHORS   Shaw,J.P., Petsko,G.A. and Ringe,D.
  TITLE     Determination of the structure of alanine racemase from Bacillus
            stearothermophilus at 1.9-A resolution
  JOURNAL   Biochemistry 36 (6), 1329-1342 (1997)
   PUBMED   9063881
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013345.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01168.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..356
                     /product="alanine racemase"
                     /EC_number="5.1.1.1"
                     /calculated_mol_wt=40701
     Region          10..351
                     /region_name="PLPDE_III"
                     /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
                     Enzymes; cl00261"
                     /db_xref="CDD:469695"
     Site            order(33,35,83,126,159,161,213..216)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate (PLP) binding site [chemical
                     binding]"
                     /db_xref="CDD:143484"
     Site            35
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:143484"
ORIGIN      
        1 mainsikmyi seknlihnme yltsnfnkkv lavvksnayg hdislitkil fkhgykqfav
       61 arlveaekii snpdtssaei lifesigkef lksikenttf nmsinvyeel eealsygipp
      121 eriqikidfg fgrngislee iqklknfiek ndlkfagiys hlfsvnyeeg leiiekftei
      181 vnflgkerfn mihlqnsaav enfgslditt hirtgmliyg lqeegffdkn lrqvfslegk
      241 iagirnlens ryvaynlrsn lktesckyia kikigygdgf lklnentkcl iknkefnitl
      301 vtmdnsfiev dssikegdni ifypdvslaq qllnmniyel ltilsprier vlidkl
//
LOCUS       WP_235235434             229 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Fusobacterium perfoetens].
ACCESSION   WP_235235434
VERSION     WP_235235434.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..229
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=27280
     Region          9..118
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(10..12,26,43..45)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133382"
ORIGIN      
        1 mekdekeylt lgevaeilki nkttlryynr eglieferdg ennyryyrkn qidnfrviln
       61 lrkvgfslee ikefkkyfln keygsiakml dkklkeyede iketenkidi lkeskkymiy
      121 ldeiseinpe yilidlktks lsktkeeifi ikeiegklyg ilyvskkisd kiavehlykn
      181 leerkyieag dlfievvkpf kelskedaki kifkipikpl tchqvtgle
//
LOCUS       WP_235235471             297 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Paenibacillus alkaliterrae].
ACCESSION   WP_235235471
VERSION     WP_235235471.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 297)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..297
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=33747
     Region          19..276
                     /region_name="GH43-like"
                     /note="Glycosyl hydrolase family 43 protein;
                     uncharacterized; cd08986"
                     /db_xref="CDD:350100"
ORIGIN      
        1 mrennllpts lrplfdypvr dtsiclggdg wyyltgttgy pdwwgvtgdv qvwksadlqe
       61 wtpivteprk rstvwnidrd gtwqkevgqr dgapfrplwa peihyldnty wiaysiprlg
      121 ngllksvsgr pegpyednir geapisehid aslfqdddgs vyflydngki armnesmtgl
      181 aeelrllqps naehvgfegt flfkahgryh lagaefidga yhcfvasaeh vygpygdryl
      241 aiphgghnmf fkdmagqwys tffgnsphap fqerpailkv efdrelrirp vldflkg
//
LOCUS       WP_235235487             384 aa            linear   BCT 02-MAR-2025
DEFINITION  virulence factor [Paenibacillus alkaliterrae].
ACCESSION   WP_235235487
VERSION     WP_235235487.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 384)
  AUTHORS   Kaito,C., Kurokawa,K., Matsumoto,Y., Terao,Y., Kawabata,S.,
            Hamada,S. and Sekimizu,K.
  TITLE     Silkworm pathogenic bacteria infection model for identification of
            novel virulence genes
  JOURNAL   Mol Microbiol 56 (4), 934-944 (2005)
   PUBMED   15853881
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025142.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13769.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..384
                     /product="virulence factor"
                     /calculated_mol_wt=41996
     Region          4..78
                     /region_name="Nfu_N"
                     /note="Scaffold protein Nfu/NifU N terminal; pfam08712"
                     /db_xref="CDD:462574"
     Region          111..189
                     /region_name="Virulence_fact"
                     /note="Virulence factor; pfam13769"
                     /db_xref="CDD:433462"
     Region          229..362
                     /region_name="HEAT"
                     /note="HEAT repeat [General function prediction only];
                     COG1413"
                     /db_xref="CDD:441023"
     Region          244..271
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          273..303
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
ORIGIN      
        1 mklisieptp spnsmklnvd etlprgrrlt ykageavdap ellqqllqik gvrslfrttd
       61 fialdrkpga dwaailaeag qllqrdamdd gqadgdkgpa asygeaqvlv qmyrgipmqv
      121 rvrmgdsevr salpqqfgda vteaagsgmi rerkleefgv rygepdeiaa eivreleasy
      181 trerlaalvs aaiaqgtevi envaglavrp aplsleealt qfasadwqvr yaaleryvss
      241 iegiplleva lkdenssirr laviylgdlr spealphlft alrdsstsvr rtagdtlsdl
      301 gdpaaigpmi ealrdknklv rwraarflye agdesaveal reaakdsefe iqlqaqmale
      361 riergeeaag svwqqmtaar kdeq
//
LOCUS       WP_235234602             221 aa            linear   BCT 02-MAR-2025
DEFINITION  septum site-determining protein MinC [Paenibacillus alkaliterrae].
ACCESSION   WP_235234602
VERSION     WP_235234602.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 221)
  AUTHORS   Hu,Z. and Lutkenhaus,J.
  TITLE     Analysis of MinC reveals two independent domains involved in
            interaction with MinD and FtsZ
  JOURNAL   J Bacteriol 182 (14), 3965-3971 (2000)
   PUBMED   10869074
REFERENCE   2  (residues 1 to 221)
  AUTHORS   Hu,Z., Mukherjee,A., Pichoff,S. and Lutkenhaus,J.
  TITLE     The MinC component of the division site selection system in
            Escherichia coli interacts with FtsZ to prevent polymerization
  JOURNAL   Proc Natl Acad Sci U S A 96 (26), 14819-14824 (1999)
   PUBMED   10611296
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015716.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03775.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..221
                     /product="septum site-determining protein MinC"
                     /GO_process="GO:0000902 - cell morphogenesis [Evidence
                     IEA]"
                     /calculated_mol_wt=24616
     Region          4..212
                     /region_name="minC"
                     /note="septum formation inhibitor; Reviewed; PRK00513"
                     /db_xref="CDD:179052"
ORIGIN      
        1 mterqhimik gvkeglvfll ddkcefatll delqyklekt hqqlltgplv hvqvklgtrq
       61 vsdddkdrik nviraqgnlm vqsvesdelp hdsrheqkpn lrvltsiirs gqtcehdgdi
      121 lligdlnpgg tllctgdiyv lgalrgvaha giggrtdvii atslmrptql riadvisrpp
      181 eewmtgdasm efaflsegrm qidkltqlfr irhnpimfkg v
//
LOCUS       WP_235235509             437 aa            linear   BCT 02-MAR-2025
DEFINITION  stalk domain-containing protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235235509
VERSION     WP_235235509.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 437)
  AUTHORS   Wilmot,C.M., Hajdu,J., McPherson,M.J., Knowles,P.F. and
            Phillips,S.E.
  TITLE     Visualization of dioxygen bound to copper during enzyme catalysis
  JOURNAL   Science 286 (5445), 1724-1728 (1999)
   PUBMED   10576737
REFERENCE   2  (residues 1 to 437)
  AUTHORS   Parsons,M.R., Convery,M.A., Wilmot,C.M., Yadav,K.D., Blakeley,V.,
            Corner,A.S., Phillips,S.E., McPherson,M.J. and Knowles,P.F.
  TITLE     Crystal structure of a quinoenzyme: copper amine oxidase of
            Escherichia coli at 2 A resolution
  JOURNAL   Structure 3 (11), 1171-1184 (1995)
   PUBMED   8591028
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019450.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07833.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..437
                     /product="stalk domain-containing protein"
                     /calculated_mol_wt=47167
     Region          49..303
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cd00229"
                     /db_xref="CDD:238141"
     Site            order(55,97,157,284,287)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(55,284,287)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(55,97,157)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
     Region          339..435
                     /region_name="Cu_amine_oxidN1"
                     /note="Copper amine oxidase N-terminal domain; pfam07833"
                     /db_xref="CDD:400265"
ORIGIN      
        1 mysklrkvsy rglpafmiai lltttiisgq hssaasavag paentayhiv avgdsltagy
       61 ehgfteqsip ygyveqvyeq alfqglraef snygvlglkt qglarwieaa lqgvsvkadd
      121 iqsnlidpra erifaetlql rsslteadli imtiggndmn avftkleagg tlaeaaivld
      181 nalaiyekel eetirgmael rpqaqivvad qylpvpapfk ikdtlvelyp eadrlflvdg
      241 qkqlqerldg vvarlsnvgi nvkaanvadp fkgnelsfts isegdihpsr sgyaamgkaf
      301 anaiwdeylt vkpraegvpi svvingkeli ssykpvllen rtfvplreit ealgatvdwn
      361 saaqtativq dgrtvditig aaaisvngvk tklnaqpafl hrvgkeskty lplaalsegl
      421 afqvvyrdtl ktafink
//
LOCUS       WP_235235338              73 aa            linear   BCT 02-MAR-2025
DEFINITION  spore coat associated protein CotJA [Paenibacillus alkaliterrae].
ACCESSION   WP_235235338
VERSION     WP_235235338.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 73)
  AUTHORS   Seyler,R.W. Jr., Henriques,A.O., Ozin,A.J. and Moran,C.P. Jr.
  TITLE     Assembly and interactions of cotJ-encoded proteins, constituents of
            the inner layers of the Bacillus subtilis spore coat
  JOURNAL   Mol Microbiol 25 (5), 955-966 (1997)
   PUBMED   9364920
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022460.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11007.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..73
                     /product="spore coat associated protein CotJA"
                     /calculated_mol_wt=8437
     Region          1..69
                     /region_name="CotJA"
                     /note="Spore coat protein CotJA, required for the assembly
                     of CotJC [Cell cycle control, cell division, chromosome
                     partitioning]; COG5882"
                     /db_xref="CDD:444584"
ORIGIN      
        1 mryykpfisp ldpcppirvk systppqlfi pfqppnlpqf tpyealkygt lwpalyspyp
       61 yghkyvrqee gda
//
LOCUS       WP_235235536            1606 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA domain-containing protein [Fusobacterium perfoetens].
ACCESSION   WP_235235536
VERSION     WP_235235536.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024487.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13087.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1606
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..1606
                     /product="AAA domain-containing protein"
                     /calculated_mol_wt=188472
     Region          303..>423
                     /region_name="RecD"
                     /note="ATPase/5#-3# helicase helicase subunit RecD of the
                     DNA repair enzyme RecBCD (exonuclease V) [Replication,
                     recombination and repair]; COG0507"
                     /db_xref="CDD:440273"
     Region          362..>420
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            384..390
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          <915..1332
                     /region_name="DNA2"
                     /note="Superfamily I DNA and/or RNA helicase [Replication,
                     recombination and repair]; COG1112"
                     /db_xref="CDD:440729"
     Region          1353..1446
                     /region_name="MTES_1575"
                     /note="REase_MTES_1575; pfam18741"
                     /db_xref="CDD:465853"
ORIGIN      
        1 megkekvisl ynyisevtkn sksinknise ekwnyflnnl pvhqniiynn fydennaeii
       61 lsikkpnflk plviekdflp wingdwknfk dkitikeerv iekisfeegr lpfvseveki
      121 tddvknqilk kiekrniwve eqkniervrk ifddlyiqyl dlnkesdtle illanglvki
      181 knnnvyypil lkkvkidfna ednilnirnl fldeeenntq lyteflneie ninlinilkl
      241 tekikekniy plnedeidnf frefihelsm ngyykkdien fqlfdyenni liednpiffi
      301 rkkesgvika idevikniee sgeipeqlre lvginqvekv ydktlkeknl sskeilfvkd
      361 tnneqleiae riekyntvvv qgppgtgkth tianllghfl aqgknilvts qtkkalkvlk
      421 dkipkniqgl cisilddnns dmarsvenit eaigrmtsek lkkdvdfiqn erteeylklk
      481 klknkifaik ykenqsifyn gesfsikevg iylcekentl nkikgnvvdd spcpidneel
      541 kflnnyrnsv sfeeekeiel nlldykllkt knefqkilen ieknkndles vsesknfyfn
      601 dkkfflnnen ivdlekfknf nlydilpsnl kslkdwklnl isigatnetq rkiwehflte
      661 leeetniine kaikffdksi syeplkisea eilitklkea kknpgiifka hlikakkelg
      721 nkillnnkii eeieecdfvl eylkienkkl dlkrkwdsfn ieefhfedil nspneiinii
      781 nyylywyrnq kenfissiek aginpniifn kddnellsnr iktlpdkikk lekilliahk
      841 afellkanqe yeeyqnfiin svkinsiven giktaveskn iesygkyvsl lenlsektds
      901 ynkykvilnk isnvaeewae eikngnlidi tdiyeawkwk qlsqklenle kepyellqeq
      961 vrkskeelkn ltlklvekks wyhilsfiek kenlqinqal rgwkqsmeki gkgtgknaef
     1021 yrkqakekit lcqkavpawi mpmnkvidtl npgknkfdiv ivdeasqadi salvllymak
     1081 kviivgddkq vspsavgeki ekqnilrdky lkgiisnddl ygtrsslysi asttyqplml
     1141 rehfrcvpei igysnktsyd ykikplrety ssklkpavin yrvdgereek skinkveaet
     1201 iislisscle erlyenstfg iisllgqeqv eyiqkllvek igtaeiekhn ilcgdsshfq
     1261 gderdvifls mvdsnknsst plikktegtd nlnkkkynva asrakdqmwi vhsldfrndl
     1321 kdgdirkell efgenqrafm qddeinsksd sifeeevaky lsarnynikq qwevgayrid
     1381 mvvsyknekv aiecdgerwh sseeqikndi erqevlercg wnfirirgsk yfrnpvltme
     1441 eveaelnkrg iypeeincds yeddsdndli nkiktrandi llqwkneked fliqnnaeii
     1501 keindnnfse qytkeekkqk nktenlkssk ksaenskqdi fsflnnenie yidnrklsgl
     1561 lwiiynsekk ekienflevn kcnysfdrrg tkatsnrkaw rvkmee
//
LOCUS       WP_235235555             382 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6348 family protein [Fusobacterium perfoetens].
ACCESSION   WP_235235555
VERSION     WP_235235555.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039735.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19875.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..382
                     /product="DUF6348 family protein"
                     /calculated_mol_wt=44219
     Region          32..219
                     /region_name="DUF6348"
                     /note="Family of unknown function (DUF6348); pfam19875"
                     /db_xref="CDD:466219"
ORIGIN      
        1 mdidfkkael gdlnyyllkn mrdvfleees eirdntlfip eyslsirpdv iksdesmavi
       61 nyhlysekwd reifecsasm gtdrkhalsm aegsfcfgim sgikfmmnge sfkeieteyn
      121 gihkwkmyss nivgmgdipe tknpnefwki leneipkylg nqkisyikvf aaknnnqitg
      181 ecrindepik elgeliadya sqwntenfgs kkqfffavqe nstyipypyn eeeiekfvle
      241 aaymfdkcet ekdlddmivq lgektkdydl aeelinfipe icaergfpdi typekinici
      301 gedkilevnk sqifsysmik kavnhmidhg hilkdlyfky igisstynvi crakekdgid
      361 itkekgavis taygfsseyk lr
//
LOCUS       WP_235235584             388 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Fusobacterium perfoetens].
ACCESSION   WP_235235584
VERSION     WP_235235584.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..388
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=41386
     Region          6..384
                     /region_name="PRK10091"
                     /note="MFS transport protein AraJ; Provisional"
                     /db_xref="CDD:182234"
ORIGIN      
        1 mnssslrrsl ialafgtlgl giaefvmmgi lpdtavslgv siptaghfis ayalgvcfga
       61 cmllilrkyp mknsllflvs lmmvgnigaa laqsyhfmlv arfisglphg ayfgvasiva
      121 sklaqkgres eavsimiagm tianlfgvpl gtllstflsw riifclvviw ciltlysikk
      181 yvpyipplpd tgfmgqfkfl kypapwlllg atmfgnggaf awysyvtpml iqvsgfkaei
      241 itgimvlaga gmvtgnlvgg klstrfypgk vgagfqgvma lslfliffla qykipavflm
      301 cavtfclfav sspqqfliik fsqggemlga agiqiafnmg nalgaylggi piahgmeiqy
      361 salvgtcsaa mgfiifsffn hlyqdkni
//
LOCUS       WP_235235602             359 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Fusobacterium perfoetens].
ACCESSION   WP_235235602
VERSION     WP_235235602.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..359
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=41069
     Region          44..352
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mkkfkmknml kkcfitsvla fafigcgsek egetapkldy snavyiyswa eyippevfek
       61 feketgikvi ediystneem ftklkagavg ydivvpspdy aeimmnenml akidknkist
      121 yenidkrvlk klegfdkgnn yavpytmsat iiavntekvp dyprdysiyd redlkgrmtl
      181 lddmkevlia glgmegypqd tdseeamkka aeriigwknn iakfdsesfg knfasedfwv
      241 vqgyaeniym elsdeqieht dfvvpqkggs asidsfvile ssknkenahk fiefihkpei
      301 yalvadylml psinvpavey meeeplftle dldkaellkd ttptlelqnk yweeikmhn
//
LOCUS       WP_235235657             185 aa            linear   BCT 02-MAR-2025
DEFINITION  HAAS signaling domain-containing protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235235657
VERSION     WP_235235657.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 185)
  AUTHORS   Ravi,J., Anantharaman,V., Chen,S.Z., Brenner,E.P., Datta,P.,
            Aravind,L. and Gennaro,M.L.
  TITLE     The phage shock protein (PSP) envelope stress response: discovery
            of novel partners and evolutionary history
  JOURNAL   mSystems 9 (6), e0084723 (2024)
   PUBMED   38809013
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046861.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22564.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..185
                     /product="HAAS signaling domain-containing protein"
                     /calculated_mol_wt=20471
     Region          4..182
                     /region_name="DUF1700"
                     /note="Protein of unknown function (DUF1700); cl21702"
                     /db_xref="CDD:473936"
ORIGIN      
        1 mrtrdsymme ldhllrvipe pqrkewlydy ylhfeqaaqn gqseeeaare lgdprsiase
       61 lllgyrvdqa etnnsfgkls ravfatvslg lfniifilgp ylalaailla lwatavaigv
      121 agigivfesl wngtfsmaqa lavglisssi tillivglks lttsfykmtl kylkfntril
      181 rgnsk
//
LOCUS       WP_235235729             275 aa            linear   BCT 02-MAR-2025
DEFINITION  putative RNA methyltransferase [Fusobacterium perfoetens].
ACCESSION   WP_235235729
VERSION     WP_235235729.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 275)
  AUTHORS   Das,K., Acton,T., Chiang,Y., Shih,L., Arnold,E. and Montelione,G.T.
  TITLE     Crystal structure of RlmAI: implications for understanding the 23S
            rRNA G745/G748-methylation at the macrolide antibiotic-binding site
  JOURNAL   Proc Natl Acad Sci U S A 101 (12), 4041-4046 (2004)
   PUBMED   14999102
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF045339.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21302.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..275
                     /product="putative RNA methyltransferase"
                     /calculated_mol_wt=31748
     Region          3..256
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(94..100,122..123,143..145,161)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
ORIGIN      
        1 miicpickek likegrtyrc sknhsfdlsk sghvnllldn qkhskmpgdd kdmvlsrkhf
       61 leknyykgis dklneiilrn ipensdkkin ildigcgegy ytgnlknfld knniqseiig
      121 idiskeavis askshkginw ivasatnipv cdesldfiic mfakiipeek mrtlkkggkl
      181 iivstgenhl lqmkevvyen vrkdfyspie dlkifkylet inctyktfir enesiknlfn
      241 mtpyrwrspr egierlfsln eletfvdvnf diftk
//
LOCUS       WP_235235699             387 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Paenibacillus alkaliterrae].
ACCESSION   WP_235235699
VERSION     WP_235235699.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..387
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=41234
     Region          7..374
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(14..15,18..19,22,54,104..105,107..109,112,133,
                     136..137,140,217,220..221,224..226,229,255,305..306,310,
                     314,330,333..334,337..338,341)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mktaiwlylf lfvaffdlha qypiltpfai slgaapsfig lmmgmysith lpgnliagfg
       61 vdrygsrlfi vfsllaagvv llfqshvtdp wqllllrsis gfvlaflspa clsllarmts
      121 drteqgklma gnglvhtlaa vvspaagayl vakigfttaf nvlgwiliat avcaiffikd
      181 iaanpeqesa eapaakakak lplepaapmp wlvfilpval scaqgilsfe lpllaktqea
      241 mlttgllfsv vsigalitls mlflnrvsaf qrtlwgslal aiiyfliasg itapfavmll
      301 fvgmakgiil palstlliel sggarygrtf silsiafsig afigpmaagq vrdyispyyi
      361 afialmiavt vlpvhisrsl ssrthfs
//
LOCUS       WP_235235740             372 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Fusobacterium perfoetens].
ACCESSION   WP_235235740
VERSION     WP_235235740.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 372)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..372
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=40764
     Region          2..370
                     /region_name="PepD2"
                     /note="Di- or tripeptidase [Amino acid transport and
                     metabolism]; COG2195"
                     /db_xref="CDD:441798"
ORIGIN      
        1 mnkeriiddf ikmikihsps kkekefadym vnllkelgae iyldngfkny ggnaptifak
       61 ikgniegegv tlaahmdvie pnsnvnpiie ngiiktdgtt tlggddkggi acivetlktl
      121 kennishedi yvlltpcees glqgaknvdw tlvpenikpa knmlvidnag ragiiahtap
      181 skydfeitfk grkahagiep ekginavcfa ahaisqmnig ridslttsni giinsnsptn
      241 vvpdtcfvkg eirshseeki leiikeydla ckkaaekfeg tyefnyicdf ptlkpkdnlk
      301 fakefaavye slgvetelkv igggsdsnif akegynsiii gvgmnnvhtv deyleieely
      361 ktteavikyi sk
//
LOCUS       WP_235235796             385 aa            linear   BCT 02-MAR-2025
DEFINITION  Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal
            domain [Fusobacterium perfoetens].
ACCESSION   WP_235235796
VERSION     WP_235235796.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 385)
  AUTHORS   Baumer,S., Ide,T., Jacobi,C., Johann,A., Gottschalk,G. and
            Deppenmeier,U.
  TITLE     The F420H2 dehydrogenase from Methanosarcina mazei is a
            Redox-driven proton pump closely related to NADH dehydrogenases
  JOURNAL   J Biol Chem 275 (24), 17968-17973 (2000)
   PUBMED   10751389
REFERENCE   2  (residues 1 to 385)
  AUTHORS   Alex,L.A., Reeve,J.N., Orme-Johnson,W.H. and Walsh,C.T.
  TITLE     Cloning, sequence determination, and expression of the genes
            encoding the subunits of the nickel-containing
            8-hydroxy-5-deazaflavin reducing hydrogenase from Methanobacterium
            thermoautotrophicum delta H
  JOURNAL   Biochemistry 29 (31), 7237-7244 (1990)
   PUBMED   2207102
REFERENCE   3  (residues 1 to 385)
  AUTHORS   Shuber,A.P., Orr,E.C., Recny,M.A., Schendel,P.F., May,H.D.,
            Schauer,N.L. and Ferry,J.G.
  TITLE     Cloning, expression, and nucleotide sequence of the formate
            dehydrogenase genes from Methanobacterium formicicum
  JOURNAL   J Biol Chem 261 (28), 12942-12947 (1986)
   PUBMED   3531194
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016328.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04432.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..385
                     /product="Coenzyme F420 hydrogenase/dehydrogenase, beta
                     subunit C-terminal domain"
                     /calculated_mol_wt=44444
     Region          14..>59
                     /region_name="NuoI"
                     /note="Formate hydrogenlyase subunit 6/NADH:ubiquinone
                     oxidoreductase 23 kD subunit (chain I) [Energy production
                     and conversion]; COG1143"
                     /db_xref="CDD:440758"
     Region          70..350
                     /region_name="FrhB"
                     /note="Coenzyme F420-reducing hydrogenase, beta subunit
                     [Energy production and conversion]; COG1035"
                     /db_xref="CDD:440658"
ORIGIN      
        1 mkktainiig nkqctgcfgc ynicpvnaie mkydeegfyk pnilenciec gkcekvcpvi
       61 knrnnnkyvk vygawsnske illnsssggi fsemaleiln kngiiygasw engnvkhkri
      121 ekkedlkdlr gskylpsfvg nsyknvvedl knnkkvlfsg tpcqiaalnk ivksdnlitv
      181 dlichgmpsy ksykkycdee fknpvtkvdf rskgtgwinf sliyytnilk nnyhymdkff
      241 fgflkdiyln epcyackfkg tkngekread itladfwgvp kelfnkngvs lvitnnekge
      301 eifskiknki ffkevsletg ikgnqsfyks ctrpkerdmf ykdfdklsfn elsnkyfrvp
      361 slmerrikri lsfpirilrf ikksl
//
LOCUS       WP_235235924             545 aa            linear   BCT 02-MAR-2025
DEFINITION  GMC oxidoreductase [Paenibacillus alkaliterrae].
ACCESSION   WP_235235924
VERSION     WP_235235924.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05199.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..545
                     /product="GMC oxidoreductase"
                     /GO_function="GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /calculated_mol_wt=59762
     Region          12..51
                     /region_name="LysM"
                     /note="LysM domain; pfam01476"
                     /db_xref="CDD:396179"
     Region          107..545
                     /region_name="BetA"
                     /note="Choline dehydrogenase or related flavoprotein
                     [Lipid transport and metabolism, General function
                     prediction only]; COG2303"
                     /db_xref="CDD:441878"
ORIGIN      
        1 mitlkiyiad dgdtlrtisr kngaeledll slnphiarpd lvitgnqvkl pdaststrdr
       61 tpvpscpppk ltyqeqwipl ttleqmerty ydvlvvgtga gggaalwrlv qqlqnsgkri
      121 giiergglli pthaqniatl dfesrnsyfn svavrrtdfa tqfvyalggr tlfwtatspr
      181 msladmagwp itvqemdnyy niaekamnvt qsftegasit qilldrlqqn gfpesidepi
      241 amnlqptsrf gvinsnvfys slvlfaqaln gaydlavnar avqvltdkdr vagvkvmspd
      301 kksyylkarn vvlsastlgt aqillnsdiq graighylst hsritgagmv nrsefpevlg
      361 plrilipgtg drpyqiqilg pgpyryvqye iqplqaewgv tfaasgkves rydnkvtldp
      421 lkrdeygvpe iqidfsyseq draviqqmgd avkrassamg vplierdgqp fclvppgqev
      481 hemgtcrmgd dpissatnry gqihgmrgly vadnsvipts gtasptltta alairtadyi
      541 vqqlk
//
LOCUS       WP_235235588             441 aa            linear   BCT 02-MAR-2025
DEFINITION  sodium/glutamate symporter [Fusobacterium perfoetens].
ACCESSION   WP_235235588
VERSION     WP_235235588.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 441)
  AUTHORS   Kalman,M., Gentry,D.R. and Cashel,M.
  TITLE     Characterization of the Escherichia coli K12 gltS glutamate
            permease gene
  JOURNAL   Mol Gen Genet 225 (3), 379-386 (1991)
   PUBMED   2017136
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015573.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03616.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..441
                     /product="sodium/glutamate symporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015501 - glutamate:sodium symporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0015813 - L-glutamate transmembrane
                     transport [Evidence IEA]"
                     /calculated_mol_wt=48531
     Region          6..382
                     /region_name="Glt_symporter"
                     /note="Sodium/glutamate symporter; cl19414"
                     /db_xref="CDD:473169"
ORIGIN      
        1 mttvfiysig llsvflligv alrakikilq nlflpasvig gflllmlplp keyiniyski
       61 pgtlivpiva siplglsvsn nkdrlktvlp hglimmgvtm gqigvgiisy lifkniipnl
      121 ypifgaelef afagghgtig mlsnmlkdrn lpywdisqgv gsavatfglv ggilfgmlii
      181 nigarkkvcr yiekpenipe alktgyekdi srqnsigret tlstsvdtlg fhsalilsvt
      241 alsyivfnfv kahkiiylrs iavwtyavfi mfivwyvmck lnlkhlvdsk vksklsgmlt
      301 eyaiiaaias mpvkviaqyi ipiifvslmg flvtfiyifv fsklfiredw fehgiisfgm
      361 ntgifitgll llrvtdpelk ssafadhtlc yamtswsfvl igilldiwis kgavtalits
      421 lvllilftif lpfaagkklk a
//
LOCUS       WP_235235955             545 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235235955
VERSION     WP_235235955.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 545)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 545)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 545)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 545)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..545
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=60876
     Region          57..541
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mkktgfllla sallvsllag csganskked pakndpkpae nnpateqkea aypasfsywv
       61 glngnvaatl adyselkvyk kleentgtkv efkhpstdpa qaeeqfnlmi asgnypdvie
      121 kswlvsgkgp daliedgtli rlnelidqha pnikkylseh peiekmiktd sgniyafpfi
      181 rgdnelmvff gpiirqdwle klnleepati eewekvltaf rdgdpngngk kdeipyllny
      241 rnvrsgatne ligawgiaaq fyqvngkvmy geiqpeykqf letmqrwyke klidpdfaat
      301 dgklqdakvt gdqlgslyty nggglgkytd lmkdkpgfkl igvshpslvk geisalgqvd
      361 kpytglgaai tktsknpeqi vkwldwgyse egnmafnfgi egesyemvdn ypkytdkitk
      421 npdglpmaqs lsqyarstsn gpfiqdiryl eqylqkdtqk ealkkwsqak neivlppitl
      481 taeeskrmas imgdantyae emmlkfimga esldkfddfv atmksfgide avkiqqtamd
      541 ryfar
//
LOCUS       WP_235236065            1000 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235236065
VERSION     WP_235236065.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 1000)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 1000)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 1000)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 1000)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..1000
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=113721
     Region          <114..238
                     /region_name="CBM6-CBM35-CBM36_like"
                     /note="Carbohydrate Binding Module 6 (CBM6) and CBM35_like
                     superfamily; cl14880"
                     /db_xref="CDD:449372"
     Region          270..417
                     /region_name="CBM6-CBM35-CBM36_like"
                     /note="Carbohydrate Binding Module 6 (CBM6) and CBM35_like
                     superfamily; cl14880"
                     /db_xref="CDD:449372"
     Region          <412..492
                     /region_name="DotZ"
                     /note="Legionella pneumophila DotZ protein domain family;
                     cd22644"
                     /db_xref="CDD:439349"
     Region          578..959
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 maggkrkrpg frllilflsi tligtsnmpg rtgsdrtaha eseraagmsv dliesapsdq
       61 kepyyyevrk kresdkipsg etqtiiqaad yssksedaav tagtyqgqad vllwssakgw
      121 veyeievdqe glyeivadyf pllddnrkkr rssilsaqvn gvypfrears msferefqnd
      181 pprfdadgnq lqssideieg wkskpfrdsd gayalpllwh lqkgrntmri hvsqqpmaik
      241 sftikppaei pfyeevkksy paassmskes iiieaeqfsk knstsiqaqy drdafttpks
      301 fkkksyntlg awgwykggha vswefeaped glykigmran qnlrknlsvs rtiyidgeip
      361 fkelqsyqip yasgwrgyti engdgqplef ylkkgkhsis meagyepymp viakveqmva
      421 slkavleqik satgnrqddq frvwdvekdm pgvtdslkqi kdqlteqvek lreinkevdi
      481 vaqtyrssak dieellhkpe kiatshltlg avleqlqeqy rnfmdaplqi dklyitpaes
      541 sfprmeahff ekakgmfatl mysfedrnrl geqngdvlnv wmmmgrdyvd elqmiadetf
      601 tpeygvkvkv nlvqspdlli lakasgilpd valgipgvmp femalrgaal nlqtlpggde
      661 liakyhpgam lpffyngghy gipettsfkv lfyrkdilge ldlqvpdtwd dvykmiptll
      721 qkqynfhvpp edfssmffqn gaeiytpdgm stalnkpeaf dafkkwtdlf nihglerqvq
      781 sfynqfragt mpigiadfnm ymqlmvaapd ilnewaiapi pgtrqpdgsi vrwaagsnpt
      841 samlfndtpe hkrdiawkfl qwylsdetqt eyglnmeqfr geafrwntan vqafinmpwk
      901 kedlkvileq wkwikdvpnv pggymstrel anawnravvp dshaletpri alekgikait
      961 relvrkqqef hfrdatgnvv rtldlpqile pwkgadidve
//
LOCUS       WP_235236085             633 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Fusobacterium perfoetens].
ACCESSION   WP_235236085
VERSION     WP_235236085.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 633)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 633)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 633)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..633
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=68415
     Region          7..379
                     /region_name="SCAD_SBCAD"
                     /note="Short chain acyl-CoA dehydrogenases and eukaryotic
                     short/branched chain acyl-CoA dehydrogenases; cd01158"
                     /db_xref="CDD:173847"
     Site            order(123,126,132,156,158,336,340,363)
                     /site_type="other"
                     /note="FAD binding site [chemical binding]"
                     /db_xref="CDD:173847"
     Site            order(128,133,156,199..203,268,271,280,284..285,287,290,
                     298,321,332,336,341,343,345..346,350,353..354,357..358,
                     360,367,370,373)
                     /site_type="other"
                     /note="homotetramer interface [polypeptide binding]"
                     /db_xref="CDD:173847"
     Site            order(132..133,236,239..240,243,271,363)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:173847"
     Site            363
                     /site_type="active"
                     /note="catalytic base [active]"
                     /db_xref="CDD:173847"
     Region          <435..555
                     /region_name="FixB"
                     /note="Electron transfer flavoprotein, alpha subunit FixB
                     [Energy production and conversion]; COG2025"
                     /db_xref="CDD:441628"
     Region          582..633
                     /region_name="NorV"
                     /note="Flavorubredoxin [Inorganic ion transport and
                     metabolism]; COG1773"
                     /db_xref="CDD:441379"
ORIGIN      
        1 mlfktteahe alrarvrefa enevkpiafm ldqnnefpse aikklgemdl mgipypkeyg
       61 gagldalsya iaveelsrvd ggtgvilsah vslgsypima fgteeqkkky lvplakgeki
      121 gafgltepna gsdaggtett avlqgdhyil ngekifitna pkadtyiifa vttpdigtkg
      181 isafivekgw egftfgdhyd klgirsssta qllfndvkvp kenllgkege gfkiamatld
      241 ggrigiasqa lgiaqgayeh aleyakeriq fgkpiahqqi isfkladmat klraarflvy
      301 saaelkehhe pygmesamak qyasdiclev vndalqifgg tgylkgmeve rayrdakict
      361 iyegtneiqr vviaahiigk iakeggsskk kgpiaglrkk milkegtvee rvktlvdalk
      421 adgydftvgi dldtpitkad rvvsagrgvg kkenmelikn lavqagaavg ssrpvaeewk
      481 yvplnryvgm sgqkfngnly iacgisgagq hlkgikdatt ivainsnana pifknadygi
      541 vgtieevlpv ltaaldngep kkeappmkkm kkpfikksap sykihvcsgc gyeydqeigd
      601 peneikpgtt feklpeewic plcgeskdef iev
//
LOCUS       WP_235236148             620 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2207 family protein [Fusobacterium perfoetens].
ACCESSION   WP_235236148
VERSION     WP_235236148.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF044955.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20990.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..620
                     /product="DUF2207 family protein"
                     /calculated_mol_wt=70952
     Region          1..584
                     /region_name="COG4907"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:443935"
ORIGIN      
        1 mgkyryfwrk iiftllflti fsalfsasyk indlkilaqi rkdgsvkvte qvvykaekin
       61 giiynidaeg ygepkdisif yekdgeyiqa vrkrgtnrgy yslsekegly kiklyyplyn
      121 eketfiisyi lpegisvykd taqfnrkmvg rnwqnnikni evtielpeet lkekiyafgh
      181 gpltgnieiv ngrkikyslk nyypgefiet nilfpkeiis einkkyikny kafddimale
      241 knlaeeanre rekavrmtif swtafgavic wiffvgsfvy ikngkrykvq apygeyfrel
      301 pddytpavag avsarltikp ehlfatvmdl vrkdffqmse ediinsngkk ehrtilrkie
      361 ekdisslkey ekyvfqwyin emgdgtevvm edvesyisgk knakafysky kewcrkvekd
      421 leekgltrek nkkipvllgv vtgflmfpgg vfltgvfrds kfmlftfiav pfivfiisrk
      481 klskiaeeay akwsafkkfl idysnleeak tasiyiwehy fvyavalgva ekvakgykki
      541 eslrgenrgt evgryyrpsi mnayiyssaf hsiekatsga anrsirevsk snhssaggrg
      601 ggfsggssgg gggrggggaf
//
LOCUS       WP_235236234             480 aa            linear   BCT 02-MAR-2025
DEFINITION  GMC oxidoreductase [Paenibacillus alkaliterrae].
ACCESSION   WP_235236234
VERSION     WP_235236234.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05199.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..480
                     /product="GMC oxidoreductase"
                     /GO_function="GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /calculated_mol_wt=53200
     Region          <205..480
                     /region_name="BetA"
                     /note="Choline dehydrogenase or related flavoprotein
                     [Lipid transport and metabolism, General function
                     prediction only]; COG2303"
                     /db_xref="CDD:441878"
ORIGIN      
        1 myrqsdraan lynewipltp ledmerteyd vlivgsgagg gavlsqlckq wgangkkigv
       61 vekgglllpt hfyniptytl prfrsyfdkv stpvnqtlfr elfalggrtl awqlvaprmp
      121 psetvswpvp arelsfyyaa aerairvtpy yqegsyytsi lldrlhsrgf phavpmpiav
      181 dreptkygql hsnaafssii qfaealnrrp ydlavnarav eiitdrkrvt gvrvmspdkk
      241 syilkaktvv lsastfenpr llmasgipgr aighyltths llgltgyfdr rqfpevlgal
      301 gilipgqagh pyqvmiggpp eeynayqqyl vkplqnqlrv vagafgeves rfdnrvvldm
      361 akrdeygvpd iqvhfsysek dqavirqmra gvrqlftamq atsveqvegp vieaihdmgt
      421 crmgydpsts vtdpygqvhg vsglfvadns viptsgtanp tlttvalair tadyiiqrlr
//
LOCUS       WP_235236249             141 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Fusobacterium perfoetens].
ACCESSION   WP_235236249
VERSION     WP_235236249.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024898.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13508.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..141
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=16588
     Region          1..141
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
     Site            order(72..74,84..85)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
ORIGIN      
        1 mirklnnadl devikiwlne nikthffisp eywksnettv knllplaevy iyeknekivg
       61 figldndyia gifiksdeqs kgigkkllnf vktfktelnl nvyiknikav nfykrenfki
      121 kketvdpntg ekeffmiwkk e
//
LOCUS       WP_235236278             413 aa            linear   BCT 02-MAR-2025
DEFINITION  TolC family protein [Fusobacterium perfoetens].
ACCESSION   WP_235236278
VERSION     WP_235236278.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 413)
  AUTHORS   Johnson,J.M. and Church,G.M.
  TITLE     Alignment and structure prediction of divergent protein families:
            periplasmic and outer membrane proteins of bacterial efflux pumps
  JOURNAL   J Mol Biol 287 (3), 695-715 (1999)
   PUBMED   10092468
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02321.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..413
                     /product="TolC family protein"
                     /GO_function="GO:0015562 - efflux transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=49102
     Region          <145..409
                     /region_name="TolC"
                     /note="Outer membrane protein TolC [Cell
                     wall/membrane/envelope biogenesis]; COG1538"
                     /db_xref="CDD:441147"
ORIGIN      
        1 mkkilfiflt lslisygdev tlddlldklt etsyrkeiye leqkktdtle kfykmdnyng
       61 vkssvttsyd dteqiykttg raefgdlyie gkrnhnpend lifginknik nmifsendsn
      121 llkndlkkea dkytflknme sqkialialy rdyknmefei kikknglktl kseektleks
      181 felgaipkie leslqysrkn leieihtlee nlkkiktrfl ydfkidisdk tlsniepnyk
      241 eineyistig ykdieklrie kdiikeniry mnyndkvpdf slglerdtrl denrivfkis
      301 kplfyynadl enertsfkqq eillnqkiee naaeklniet tyanyikeyk vlrnkadlek
      361 nkyeikkley slgkidylev mesfddymey evsqekakni lnsyvyeimv rge
//
LOCUS       WP_235235904             240 aa            linear   BCT 02-MAR-2025
DEFINITION  lipopolysaccharide core heptose(II) kinase RfaY [Fusobacterium
            perfoetens].
ACCESSION   WP_235235904
VERSION     WP_235235904.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 240)
  AUTHORS   Yethon,J.A., Heinrichs,D.E., Monteiro,M.A., Perry,M.B. and
            Whitfield,C.
  TITLE     Involvement of waaY, waaQ, and waaP in the modification of
            Escherichia coli lipopolysaccharide and their role in the formation
            of a stable outer membrane
  JOURNAL   J Biol Chem 273 (41), 26310-26316 (1998)
   PUBMED   9756860
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017940.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06176.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..240
                     /product="lipopolysaccharide core heptose(II) kinase RfaY"
                     /calculated_mol_wt=29061
     Region          7..>175
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 mkykaekykg yklyyledkf snigkkiidk eyteceilkn tkrnfveiis vnnirfvlke
       61 nknehiipqr klmtlfkkge alttlinlne lienykikey vkpflvinkr kygfitysal
      121 imenidgrid rdyldkmvsl mkkvhsfkiy hgdfnpgnfl ienekiriid tqgkkmkffn
      181 yrahydmltm kmdsyqemky pykkdvmyyf vlgikkfkkl kfiekikakk kklrekgwki
//
LOCUS       WP_235236453             291 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Fusobacterium perfoetens].
ACCESSION   WP_235236453
VERSION     WP_235236453.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 291)
  AUTHORS   Yeo,C.C. and Poh,C.L.
  TITLE     Characterization of IS1474, an insertion sequence of the IS21
            family isolated from Pseudomonas alcaligenes NCIB 9867
  JOURNAL   FEMS Microbiol Lett 149 (2), 257-263 (1997)
   PUBMED   9141667
REFERENCE   2  (residues 1 to 291)
  AUTHORS   Solinas,F., Marconi,A.M., Ruzzi,M. and Zennaro,E.
  TITLE     Characterization and sequence of a novel insertion sequence,
            IS1162, from Pseudomonas fluorescens
  JOURNAL   Gene 155 (1), 77-82 (1995)
   PUBMED   7698671
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01695.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..291
                     /product="ATP-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=33488
     Region          30..278
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            139..146
                     /site_type="other"
                     /note="Walker A motif"
                     /db_xref="CDD:99707"
     Site            order(140..147,199,233)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:99707"
     Site            195..200
                     /site_type="other"
                     /note="Walker B motif"
                     /db_xref="CDD:99707"
ORIGIN      
        1 mkiitrnnil dfenkdlkak epeyhsfkkc sicgkpyikn htlpeemini lgdkiryips
       61 ctchetlyer dlaefdrkar eeriknkvnk yknfsiidsr flnstfekad ltgrhmeisl
      121 kyaesfmksk gdagilfygn sgtgktfaaa cignylterr ktviainlgl ylgklkvewg
      181 kaeneileki slcdlliidd lgcekisews lekifllidt ryraekplii ttnleysrdn
      241 lkcaivktfg trikdrisem cfpicctges rrksgtekfm dflssslinr k
//
LOCUS       WP_235236495             771 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235236495
VERSION     WP_235236495.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..771
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=88445
     Region          35..281
                     /region_name="dCache_1"
                     /note="Cache domain; pfam02743"
                     /db_xref="CDD:460673"
     Region          365..>581
                     /region_name="CdaR"
                     /note="Sugar diacid utilization regulator CdaR
                     [Transcription, Signal transduction mechanisms]; COG3835"
                     /db_xref="CDD:443046"
     Region          <578..768
                     /region_name="AraC"
                     /note="AraC-type DNA-binding domain and AraC-containing
                     proteins [Transcription]; COG2207"
                     /db_xref="CDD:441809"
     Region          680..763
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
ORIGIN      
        1 mkkfsiytni vlfgfalsia piitlgffsy mkssdsiqth vnqsniqmmn qlngnieqvl
       61 qtidytlnyi intnqvqdal yrplsyndfq lynqmkqeln llqspemmvt dvilanaasn
      121 wvihnrglss feefstgtal pdllelegst nwvmletaal gtsdtssyac pitltlvkkm
      181 plhtlskrgi alatipscsl aemlekpipg savmvldevq sillhpdvsm igrsltetnl
      241 idvadasrft ghagqfqtsm gnetisvtyv rsefngwtya sftemseftk earsigwftl
      301 yvclliiclc vllvwlgsrk vytpiraifq qiadrlpetq ankrnelqvi dehiqdlfas
      361 ntklrhelhq nsqqmrtffl hklfqgqsip seiedkialf gyadqvsewn hlavltlqid
      421 ileetryeqk dldlllfaag niieeivpsl drlppvivdq tqvtliggkd mtldtfndyi
      481 ykltesiqqn mrsyldldvs igislpfksl ksasrayqeg leslkhrlkl gkgvivpyfs
      541 lnsgkhsqvy fypmqvenql idaikladee lasmllkqwl eqvflkdrtp heyqislirl
      601 lnglmivmqe agirleqldi kesslyeell elyvhseies wyktriivpm irvfqdrqes
      661 qyhniseqii diirnefecd itleecaarl hynvfylssv fkketdmtfs eylsqyrlam
      721 skkwlvetnm svkqiaeklt ynnpqnfirs frkqedmtpg qyrakyakpd l
//
LOCUS       WP_235236521              90 aa            linear   BCT 02-MAR-2025
DEFINITION  Imm17 family immunity protein [Fusobacterium perfoetens].
ACCESSION   WP_235236521
VERSION     WP_235236521.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 90)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026900.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15562.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..90
                     /product="Imm17 family immunity protein"
                     /calculated_mol_wt=10385
ORIGIN      
        1 mnnpisdlyi kfmekidpyl rrypylvgli gggllffgai fkwnwicnpt gskrfmrtvy
       61 eifgeggfrf ftglfgaiii ifslslwlkk
//
LOCUS       WP_235236533             773 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase C-terminal domain-containing protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235236533
VERSION     WP_235236533.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13307.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..773
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..773
                     /product="helicase C-terminal domain-containing protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0004386 - helicase activity [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA]"
                     /GO_process="GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /calculated_mol_wt=87183
     Region          9..149
                     /region_name="Cas4_I-A_I-B_I-C_I-D_II-B"
                     /note="CRISPR/Cas system-associated protein Cas4; cl00641"
                     /db_xref="CDD:469855"
     Region          180..772
                     /region_name="DinG"
                     /note="Rad3-related DNA helicase DinG [Replication,
                     recombination and repair]; COG1199"
                     /db_xref="CDD:440812"
ORIGIN      
        1 mqnedtvais vrhlveyvyl sgsidvrlnt ietlhegtka hqrvqrsygv ddrkevyvka
       61 dirvddllfv vdgrcdgllg tepvltvdei kstggdleri tedgypvhwa qalfyaymya
      121 kehgqasmrv qltyvqtete eerrfmrklg faeleqyvhe vaaryapyaq qrrrheqarn
      181 asirelsfpf esyragqrkl agavyksiee gvrlfakapt gigktistty pavkamgagm
      241 lqrfyyltar tttraaaeda llfmkskglq lhtvtitake kicfqeevrc ekehcpfadg
      301 yydringavl dllenetvmt rpvieayark hqvcpfefsl daayaadavi cdynyifdpr
      361 isfkrqyaem kkqtallvde ahnlvdrare mfsaelakap flalqrelkg vhedgyraak
      421 aindyfialr krsggaphli erllpeelvs ladafvsaae qalsgrargt ggggrllldt
      481 yfaaqnftrt aklfderyvv ytelpgndvr lklfcldpsl llqqmgkgyr shvyfsatls
      541 pvsyymdmlg ageddytlav pspfsreqln viiqplstry hdrdesklpi aklilgltae
      601 rpgnyfvffp syaymnavye tymelcewpe pagdaasgad vllqkpdmse eerdqflaaf
      661 qagserslig favmggvfse gvdlagdrli gvvvvgvglp qlgvernmlk dyfngqgksg
      721 ydyayvypgm nkvlqaggrl irsetdrgtl vliddrylqp qyqrllpeew ref
//
LOCUS       WP_235236572             342 aa            linear   BCT 02-MAR-2025
DEFINITION  glucosaminidase domain-containing protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235236572
VERSION     WP_235236572.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 342)
  AUTHORS   Nambu,T., Minamino,T., Macnab,R.M. and Kutsukake,K.
  TITLE     Peptidoglycan-hydrolyzing activity of the FlgJ protein, essential
            for flagellar rod formation in Salmonella typhimurium
  JOURNAL   J Bacteriol 181 (5), 1555-1561 (1999)
   PUBMED   10049388
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013954.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01832.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..342
                     /product="glucosaminidase domain-containing protein"
                     /GO_function="GO:0004040 - amidase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=37658
     Region          101..>153
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          <207..306
                     /region_name="LytD"
                     /note="Beta- N-acetylglucosaminidase [Carbohydrate
                     transport and metabolism]; COG4193"
                     /db_xref="CDD:443347"
ORIGIN      
        1 mrkkliqqsf iyflmlsviv tlgmyvqpin knkaesviaa avvpaeaapi aspkeiifsq
       61 tmppyppept ienkqsdvsi lsvdppakke spvieeplpa yrvtayylnv rtepnarsri
      121 mtvvelgttf eivtvldngw lelkdggfih ggyakliere aqdremadqk kekgavsies
      181 ntyeasqqte eeemasepgk ptsivesdsg ltvahiekif agtalsghgl eeaileiede
      241 yginafftia vmklesgngk skiaklknnl fglnaidgdq ynkafsfktk gdsvrrfgkl
      301 lakhyvgkgl etieqvakky cpanskwsgl vknimksdyr kl
//
LOCUS       WP_235236622             278 aa            linear   BCT 02-MAR-2025
DEFINITION  histidine kinase N-terminal 7TM domain-containing protein
            [Paenibacillus alkaliterrae].
ACCESSION   WP_235236622
VERSION     WP_235236622.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 278)
  AUTHORS   Jacob-Dubuisson,F., Mechaly,A., Betton,J.M. and Antoine,R.
  TITLE     Structural insights into the signalling mechanisms of two-component
            systems
  JOURNAL   Nat Rev Microbiol 16 (10), 585-593 (2018)
   PUBMED   30008469
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028237.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16927.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..278
                     /product="histidine kinase N-terminal 7TM
                     domain-containing protein"
                     /calculated_mol_wt=31922
     Region          5..191
                     /region_name="HisKA_7TM"
                     /note="N-terminal 7TM region of histidine kinase;
                     pfam16927"
                     /db_xref="CDD:465318"
ORIGIN      
        1 mifyfiallt talivminnr rnetnrwaay flssasiggl sdsfqnadff vtadilqffn
       61 ytltpysvli fsilytrvsl siqskrkikl wllfpiavma vivtlstskp lfftglllws
      121 apyyliscfl ltvsfwkerd krrkrnrfit tiiivptllg vlifiyvaka vspdfeffny
      181 ilvfivysla lallctfvyg garreapira rsagkhdegr qyghydaqsy dqernrknid
      241 khgklvsnvs rnrraveaad ancnkrlqty arvsyknp
//
LOCUS       WP_235236765             254 aa            linear   BCT 02-MAR-2025
DEFINITION  putative HNHc nuclease [Fusobacterium perfoetens].
ACCESSION   WP_235236765
VERSION     WP_235236765.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028094.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16784.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..254
                     /product="putative HNHc nuclease"
                     /calculated_mol_wt=29270
     Region          43..237
                     /region_name="HNHc_6"
                     /note="Putative HNHc nuclease; pfam16784"
                     /db_xref="CDD:293389"
ORIGIN      
        1 mqyvididre nnhikvlvps akgtiteekv knffgvlkqs twevepvqrl sldqmkmifa
       61 lcrdyseiig yepeelrell kaefcikncv edfscspykr naatmkiatd fiqfiiehal
      121 nltgctlkvv eghgknrivr sareivpdir kyviaclmnk tcaicgatte qreidlhhwd
      181 svnsiggyeh ddglktrfis lcrehhtefh nieakafsek yhidgvwlse nivkklkkdk
      241 vypnhfkafk etae
//
LOCUS       WP_235236220             282 aa            linear   BCT 02-MAR-2025
DEFINITION  KH domain-containing protein [Fusobacterium perfoetens].
ACCESSION   WP_235236220
VERSION     WP_235236220.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 282)
  AUTHORS   Musco,G., Stier,G., Joseph,C., Castiglione Morelli,M.A., Nilges,M.,
            Gibson,T.J. and Pastore,A.
  TITLE     Three-dimensional structure and stability of the KH domain:
            molecular insights into the fragile X syndrome
  JOURNAL   Cell 85 (2), 237-245 (1996)
   PUBMED   8612276
REFERENCE   2  (residues 1 to 282)
  AUTHORS   Burd,C.G. and Dreyfuss,G.
  TITLE     Conserved structures and diversity of functions of RNA-binding
            proteins
  JOURNAL   Science 265 (5172), 615-621 (1994)
   PUBMED   8036511
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012243.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00013.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..282
                     /product="KH domain-containing protein"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /calculated_mol_wt=32451
     Region          20..197
                     /region_name="PseudoU_synth"
                     /note="Pseudouridine synthases catalyze the isomerization
                     of specific uridines in an RNA molecule to pseudouridines
                     (5-ribosyluracil, psi); cl00130"
                     /db_xref="CDD:469624"
     Site            order(60..63,189)
                     /site_type="active"
                     /db_xref="CDD:211324"
     Region          217..>272
                     /region_name="KH-I"
                     /note="K homology (KH) RNA-binding domain, type I;
                     cl00098"
                     /db_xref="CDD:469614"
ORIGIN      
        1 mdirvleksk ktgyifdvfy rgsgfdafde idgkatvkgy fkeimnslgf twakgiqqgg
       61 rtdakvsgnn clyvssnfnr dvqkivcdfn sraegkikit gvrktfpnli fpdyvekrky
      121 iyrfpkkkit kseeeidnmc keltgtydvs rftdtkgekl kehirtvevs ykdgelifig
      181 nsfmpkqvri msgyiltgei talpgkyltl ekiylkeell kniltedkdi kienvekver
      241 tedktfsvfy vskdkkgevi gkngrnikkl rkeygtiivr ei
//
LOCUS       WP_235236813             235 aa            linear   BCT 02-MAR-2025
DEFINITION  squalene/phytoene synthase family protein [Oenococcus oeni].
ACCESSION   WP_235236813
VERSION     WP_235236813.1
KEYWORDS    RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012705.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00494.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Oenococcus oeni"
                     /db_xref="taxon:1247"
     Protein         1..235
                     /product="squalene/phytoene synthase family protein"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=27080
     Region          <42..224
                     /region_name="Isoprenoid_Biosyn_C1"
                     /note="Isoprenoid Biosynthesis enzymes, Class 1; cl00210"
                     /db_xref="CDD:469660"
     Site            117..125
                     /site_type="other"
                     /note="aspartate-rich region 2"
                     /db_xref="CDD:173830"
ORIGIN      
        1 mqltkeknny nflfsswvka sskneimlne nsnladkvaf ifktfeidkl emmqmfagqd
       61 sdlknkvint yddlihycyq vagtvgcmif pilsknnnls sirnkvidig iamqltnilr
      121 dihedairnr vfipdqllvl fkvnkeelkg rktkrnlkkl iaflskkalf fyeseleviq
      181 tvdsfsakfs lklaiatykk ilekiidsdf evlegriyvt nlekakildn iilkl
//
LOCUS       WP_235236799             264 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235236799
VERSION     WP_235236799.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 264)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 264)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 264)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 264)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 264)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 264)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 264)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 264)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 264)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..264
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=29766
     Region          7..110
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
     Site            order(8,10..12,34..36,91,104,106,108..109)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:341374"
     Region          8..65
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341374"
     Site            order(34,45,50..51,54,70,91..93,108)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:341374"
     Region          70..110
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341374"
     Region          <75..251
                     /region_name="GGDEF"
                     /note="GGDEF domain, diguanylate cyclase (c-di-GMP
                     synthetase) or its enzymatically inactive variants [Signal
                     transduction mechanisms]; COG2199"
                     /db_xref="CDD:441801"
ORIGIN      
        1 mkvkdfmasp vytvssersv qyvsdlmnel kvgslvvmdy gmtvgiitsr dirsshpnri
       61 vadamtpipi stspdqfawd aletmeqhri erllvvqeeq vlgivtreal hiklsqildp
      121 ltglyrapyi qqigehflnh rqyfellfid lnnfgkinke yghpmgddil ieysnrlral
      181 tnerdyvcry agdefvvitr smendamrla dslsqltvlh ninmsasvgl ansrlvpdff
      241 alsfrdlisk asllstslkq ssas
//
LOCUS       WP_235236815             251 aa            linear   BCT 02-MAR-2025
DEFINITION  phage antirepressor KilAC domain-containing protein [Fusobacterium
            perfoetens].
ACCESSION   WP_235236815
VERSION     WP_235236815.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 251)
  AUTHORS   Iyer,L.M., Koonin,E.V. and Aravind,L.
  TITLE     Extensive domain shuffling in transcription regulators of DNA
            viruses and implications for the origin of fungal APSES
            transcription factors
  JOURNAL   Genome Biol 3 (3), RESEARCH0012 (2002)
   PUBMED   11897024
REFERENCE   2  (residues 1 to 251)
  AUTHORS   Heinrich,J., Velleman,M. and Schuster,H.
  TITLE     The tripartite immunity system of phages P1 and P7
  JOURNAL   FEMS Microbiol Rev 17 (1-2), 121-126 (1995)
   PUBMED   7669337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015340.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03374.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..251
                     /product="phage antirepressor KilAC domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=28796
     Region          23..249
                     /region_name="KilAC"
                     /note="Phage antirepressor protein YoqD, KilAC domain
                     [Mobilome: prophages, transposons]; COG3645"
                     /db_xref="CDD:442862"
     Region          141..249
                     /region_name="ANT"
                     /note="Phage antirepressor protein KilAC domain;
                     pfam03374"
                     /db_xref="CDD:460903"
ORIGIN      
        1 mektlqiieq revlgkefti ygdlenplfk atdiaewidy gvsnvskmvk niddtekiit
       61 rtnntsatfl tedglyevlm qsrkpiakqf kkevkkilkt irlngmyatd klldnpdlai
      121 qaftklkeer errlqlehea einkpkvifa eavetsktsi ligelaklik qngydigqkr
      181 lfawlrdngy likiskrtdy nmptqramem nlfeiketai thsdghisis ktvkvtgkgq
      241 iyfinkfknv a
//
LOCUS       WP_235236842             183 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2441 domain-containing protein [Fusobacterium perfoetens].
ACCESSION   WP_235236842
VERSION     WP_235236842.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021872.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10386.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..183
                     /product="DUF2441 domain-containing protein"
                     /calculated_mol_wt=21722
ORIGIN      
        1 mikikilnqd eemqsfyyih ihdemknirn idtslnkeir insclelsrl qndlynnkil
       61 pkfihnnlla ieaniefirq ayykdypsrf scifavadle tlnlikikyn wnspikkiip
      121 speakiikcd mnwidflrta ppynqdhyiy ylagidfkea fpklniipiy eyliegycei
      181 vdv
//
LOCUS       WP_235236849             117 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Paenibacillus alkaliterrae].
ACCESSION   WP_235236849
VERSION     WP_235236849.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024172.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12762.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..117
                     /product="transposase"
                     /calculated_mol_wt=13563
     Region          <3..91
                     /region_name="transpos_IS1595"
                     /note="IS1595 family transposase; NF033547"
                     /db_xref="CDD:468078"
ORIGIN      
        1 mnretvetfv kknievnstl iadghrtilt lidnytieak kfnakedpeh lkwvqtlisn
       61 lksfvhgifh gldsrhlqsy ldefcyrfnr kkfvgegfnr llhsclatkt itytelt
//
LOCUS       WP_235236864             903 aa            linear   BCT 02-MAR-2025
DEFINITION  stalk domain-containing protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235236864
VERSION     WP_235236864.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 903)
  AUTHORS   Wilmot,C.M., Hajdu,J., McPherson,M.J., Knowles,P.F. and
            Phillips,S.E.
  TITLE     Visualization of dioxygen bound to copper during enzyme catalysis
  JOURNAL   Science 286 (5445), 1724-1728 (1999)
   PUBMED   10576737
REFERENCE   2  (residues 1 to 903)
  AUTHORS   Parsons,M.R., Convery,M.A., Wilmot,C.M., Yadav,K.D., Blakeley,V.,
            Corner,A.S., Phillips,S.E., McPherson,M.J. and Knowles,P.F.
  TITLE     Crystal structure of a quinoenzyme: copper amine oxidase of
            Escherichia coli at 2 A resolution
  JOURNAL   Structure 3 (11), 1171-1184 (1995)
   PUBMED   8591028
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019450.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07833.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..903
                     /product="stalk domain-containing protein"
                     /calculated_mol_wt=95745
     Region          <263..432
                     /region_name="NAGPA"
                     /note="Sugar-P-sugar glycosidase (uncovering enzyme, UCE),
                     NAGPA superfamily [Carbohydrate transport and metabolism];
                     COG4632"
                     /db_xref="CDD:443670"
     Region          <778..840
                     /region_name="Cu_amine_oxidN1"
                     /note="Copper amine oxidase N-terminal domain; pfam07833"
                     /db_xref="CDD:400265"
     Region          811..902
                     /region_name="Cu_amine_oxidN1"
                     /note="Copper amine oxidase N-terminal domain; pfam07833"
                     /db_xref="CDD:400265"
ORIGIN      
        1 mgkvessigr ktesigkrvi vvllggalla qpiasimpsg wqtavieaad aaaasasalk
       61 lkeqafvtag akrldyvwht trgsskvqtd vhvievdltn pyvslnvisg knnsigqvns
      121 ilnmskenga vaainadvfv mgtegaplga qvsgsmimss pasltgmyaf svskdrkpsi
      181 dhytfeglvt aadgstfple gvnqsayype tngaqyshvn vmyiytsawg gaerpknsft
      241 kptevfvrng vieaisinea ipgqvpadgy ilrthgtaaa yvkehlkvge plvadyslvs
      301 qttkvkvdpa slemlagght llvnngaasa ysrdvagvsg ssytsrsgvg yskdgtkvyl
      361 itsernggnt glnlkelqqi mvqlgvdkgv nldgggsttm verplgttwl qlahptqygt
      421 tqrsvangig vftsapegql kgisvsgskv lfigqqasys lrsydtyynp iavdntsavw
      481 sstkavgtfe gntftaakag ktslsvksga istqyevevv gkdqiaslti dnavgslskg
      541 attavpltvk lkngnsykls gdsvewqfig ftavqegdsl tvesvdagvs tgyaiarydg
      601 yaamipftqg etvmtfedfe kstyaitsev tpaetkgrvk lvsdlpeqps pralqldydf
      661 tngtgtkasy aafgsngrtl pgapismtvd lysdnslnwv raefldangk ayllnlakql
      721 dwdgwktvkv nlssdgmkfp vklkrvyvvt lpevqderaa agaialdnmk lqysptaatd
      781 tnakiemnvg nttatlngks fkldsapill ngvtyvpirf vsdamggrll ydgkkgqvtv
      841 lrgnimmemt igqkdlnlng tlhtsevapi irnsrtlipi rlfseklglk vgydgktkki
      901 tid
//
LOCUS       WP_235236866            1470 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235236866
VERSION     WP_235236866.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024603.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13205.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1470
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..1470
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=154417
     Region          38..155
                     /region_name="Big_5"
                     /note="Bacterial Ig-like domain; pfam13205"
                     /db_xref="CDD:463809"
     Region          160..263
                     /region_name="Big_5"
                     /note="Bacterial Ig-like domain; pfam13205"
                     /db_xref="CDD:463809"
     Region          275..379
                     /region_name="Big_5"
                     /note="Bacterial Ig-like domain; pfam13205"
                     /db_xref="CDD:463809"
     Region          384..503
                     /region_name="Big_5"
                     /note="Bacterial Ig-like domain; pfam13205"
                     /db_xref="CDD:463809"
     Region          507..621
                     /region_name="Big_5"
                     /note="Bacterial Ig-like domain; pfam13205"
                     /db_xref="CDD:463809"
     Region          625..704
                     /region_name="SWM_repeat"
                     /note="Putative flagellar system-associated repeat;
                     pfam13753"
                     /db_xref="CDD:404617"
     Region          728..806
                     /region_name="SWM_repeat"
                     /note="Putative flagellar system-associated repeat;
                     cl23886"
                     /db_xref="CDD:420078"
     Region          829..909
                     /region_name="SWM_repeat"
                     /note="Putative flagellar system-associated repeat;
                     pfam13753"
                     /db_xref="CDD:404617"
     Region          942..1015
                     /region_name="SWM_repeat"
                     /note="Putative flagellar system-associated repeat;
                     cl23886"
                     /db_xref="CDD:420078"
     Region          1283..1323
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          1343..1384
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          1412..1453
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
ORIGIN      
        1 mnrtsklslf iavmlllqts lsgwsaglqd aaaapagpvk lslspaddli nvpintdlki
       61 tfdesirkgt gsafvsivey gsnrvlesid vstsrviled neraarivld kttaarrlel
      121 ntnyyilvde gafvnvsnga syagidnase wnfrtvtqvd ttrpfhtnrq paggnisita
      181 piemtfdepv yvaggiiqit slednrsiav tssavtgsgt stivitppav lqpetdytvt
      241 ipgtafqdaa gnlyqgsswt fttarapvnv napfspadna tsvpissplt itfdqnvqar
      301 pgknieirrv gnntlfesfl atsprvavtn sqavvspsvp feantayyvl idagaftqst
      361 dtnlwyhgis satvwnfttg ygndssapya tayspannav vasknallqi tfsepvfpss
      421 geieirevst nalfrsipvi servagggtn qltidankav sgeaakafvn ntkyyvkign
      481 rvirdavgny yggmsstgtw sftvtqdtis ptltllnpln natlvglsst fsatfsepvk
      541 igagstvnsi rfipasggsa givagsysvd ssdnrkinit pnmplisnta yyvymdanav
      601 tdmadnafag ilneyqwtfr tfgsdtaapv lsklqwsgst itmfynealn advipstgsf
      661 yvtvngapra vsgiqirges vlltlmspiv agqqvelsys kttpgliqdl saneaasvsl
      721 qevtgaqdnt lpilvsgtas gsaitlvfsk dlapvssnay lqftvniggv nysatsisst
      781 gnsvlltvsg tiqnyqnikv syspgsyalr dmagnylnai tnynlysvpd tsapslqsvt
      841 asgsvvtlty nkilntasvp svgqysvlin niarsvvqvq vsgngvfltl ssavasgevv
      901 tvsylasttl vidlsgnpap sfnhvssggs tggsgggqtg tiygaivkgs vltlnfgesl
      961 nsgyvpstvq ffvkvnetmr tvssvsisgn svamtlaspv sigdmvyvty ystssglrtn
     1021 ngatvnsfan igvanqttil dglsgdyeag dgggiglktt tattstdvsp agvqanrytv
     1081 msdrvltayq tartaglpnp rvvfkvpste raaivaisig tldnayrlna nsvfavqygd
     1141 styelqlnak dftdiqtlln gysdsgqlli ridqglsalt nnlnakisss nsqllagpyh
     1201 fdvtavngtv qkpynefngy vsrtiqnyqt idasqsavvw fdpqtgglsy vptefttsag
     1261 ktvatfkrqg nssyalirnt ssfadvsshw aastihtlar kfivegrtas rfepqkaitr
     1321 gefaayiakg lglggnktaa akfkdvnant amgvyigsas sagivmgntd gtfkpnslit
     1381 rqemavmlmr aaaaaglnvq lpqsaasylq tfkdrgkigs yaqtdvakav ylgiingkts
     1441 atvspltnat raegavmlmr llqkakfmsp
//
LOCUS       WP_235236929             293 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Paenibacillus alkaliterrae].
ACCESSION   WP_235236929
VERSION     WP_235236929.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024170.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12760.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..293
                     /product="transposase"
                     /calculated_mol_wt=33280
     Region          15..>121
                     /region_name="InsA"
                     /note="Transposase InsA [Mobilome: prophages,
                     transposons]; COG3677"
                     /db_xref="CDD:442893"
     Region          70..256
                     /region_name="transpos_IS1595"
                     /note="IS1595 family transposase; NF033547"
                     /db_xref="CDD:468078"
ORIGIN      
        1 mdiiqqfqks ysndndcipl ihklkwpsgf ccprcqhrsa ytittrrlpi yecrsckhqa
       61 sltsgtamdk srtplhkwll tlfivaacen gtnavqlael ikvtyktawt mlkkirlvis
      121 dsdrsillsg vveakleiym kqpiptyeal qkehgaiiar sttstdspyl kiklisceqs
      181 prgfltkqae reflelhvgs dlshieinrr hinppgsqal lpgiaksafh wmndtfhglg
      241 layaqsylde fcfrynqain hnhcpfefll qlclsgtsfr rcsinfrtlh ias
//
LOCUS       WP_235236954             446 aa            linear   BCT 02-MAR-2025
DEFINITION  PTS transporter subunit EIIC [Fusobacterium perfoetens].
ACCESSION   WP_235236954
VERSION     WP_235236954.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 446)
  AUTHORS   Reizer,J., Paulsen,I.T., Reizer,A., Titgemeyer,F. and Saier,M.H.
            Jr.
  TITLE     Novel phosphotransferase system genes revealed by bacterial genome
            analysis: the complete complement of pts genes in mycoplasma
            genitalium
  JOURNAL   Microb Comp Genomics 1 (3), 151-164 (1996)
   PUBMED   9689210
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02378.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..446
                     /product="PTS transporter subunit EIIC"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /calculated_mol_wt=47689
     Region          2..441
                     /region_name="PTS-II-BC-sucr"
                     /note="PTS system, sucrose-specific IIBC component;
                     TIGR01996"
                     /db_xref="CDD:131051"
ORIGIN      
        1 mdfnnvaeei lkniggkeni svmehcatrl rivakdnekv naeglktike iggyfyqsgq
       61 hqiiigtgkv nkvfdilnig diktsgakqe gyanlnpfqk clraladvfi plipvlvatg
      121 lcmglrgfll qlgmkfspei ltmtqvvtdt vfiflpalvv wsafkrfggt paigmvlglm
      181 liapmlpnaw dvasgnaipl klwifsiegf qgtilpaliv givgsyiekw ikswmpsvvd
      241 lvftpfltii igmlgaffii gpvftliedl vmsliqgiig lpfgiggaif ggvqqaltvt
      301 glhhslmive tsylaskgin plnalitasm agqagaaiay tmsiknreer alkfssivpc
      361 ffgitepllf gvtltnskvf lsgmiggaaa gifamifkva psvmgvtfip aipaylgnnl
      421 lgylamivvg mgvgmiftki lvrkek
//
LOCUS       WP_235236989             125 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Fusobacterium perfoetens].
ACCESSION   WP_235236989
VERSION     WP_235236989.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 125)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 125)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..125
                     /product="VOC family protein"
                     /calculated_mol_wt=14536
     Region          2..124
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 miehigiwte nleemkkfyc ryfngksnek yinklkgfes yfisfegnar lelmkrhdid
       61 qrsykeilgf ahlafkigsk ekvdeitell rkdgykvage prvtgdgyye svildpennk
      121 ielvg
//
LOCUS       WP_235237013             977 aa            linear   BCT 02-MAR-2025
DEFINITION  chondroitinase family polysaccharide lyase [Fusobacterium
            perfoetens].
ACCESSION   WP_235237013
VERSION     WP_235237013.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 977)
  AUTHORS   Huang,W., Lunin,V.V., Li,Y., Suzuki,S., Sugiura,N., Miyazono,H. and
            Cygler,M.
  TITLE     Crystal structure of Proteus vulgaris chondroitin sulfate ABC lyase
            I at 1.9A resolution
  JOURNAL   J Mol Biol 328 (3), 623-634 (2003)
   PUBMED   12706721
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020658.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09093.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..977
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..977
                     /product="chondroitinase family polysaccharide lyase"
                     /calculated_mol_wt=111959
     Region          27..187
                     /region_name="Lyase_N"
                     /note="Lyase, N terminal; pfam09092"
                     /db_xref="CDD:430404"
     Region          226..892
                     /region_name="GAG_Lyase"
                     /note="Glycosaminoglycan (GAG) polysaccharide lyase
                     family. This family consists of a group of secreted
                     bacterial lyase enzymes capable of acting on
                     glycosaminoglycans, such as hyaluronan and chondroitin, in
                     the extracellular matrix of host tissues; cl21724"
                     /db_xref="CDD:473942"
     Site            order(293,296,300,337,339..340,344,347,351,396,402,451,
                     458,461,464,468,509..510,513,601..602)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238517"
     Site            order(396,451,458)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:238517"
ORIGIN      
        1 mtgknfikkl litalftqtv aaygntiyqf ekgmpdnfia sktskigitd ekskdgnysl
       61 kwnfnnkdtl kikgnteytv fnkagkekar ssfamwvynk kaindkmkve fkkdgetkcs
      121 fdvnmnfegw rtmwvqydrd mqgkaeegmd eiiltapnss geilidqlyp stlidprhna
      181 rdeqvdfvnl nadtatnahw malyknynri ehkkaskltk neqegikaie kkfkdnimkk
      241 vkvtplliee nrkklteykk tslvtpqtse lyrsfseeqk sylnntqilq ygkwmrelgy
      301 mynstnnkey qkeiydifqe glnylyeegw ikgscqgtih hlgyqvrely qsiflmkepl
      361 qksgnlkkak dmvtwysamg ilytpeneik gvnvdvlntm lpgmlaatll nedekieaqe
      421 itqlknylsk sieyapgllg gfkedgavfh hmqnypayak gafdgltpim yylgntnfai
      481 enfdivkkal lmtrvysnkh nwlltlsgrh pndafqisdd vlayaaygqe kgvdkelaea
      541 ylrlapegkf adefrkmgfk aedapngswt mnmgslqlqr rgewlagvkg fsrylvgnet
      601 yiknnifgry msygtfqile kslkdsgfvq egwdwahypg ttaialpleq mkapisqvdt
      661 ysgveemlls detysggnsl dnngmfamkl henpkyngsh rarksvfffd nraillgsni
      721 enndikneth ttlfqnyles eriekvnkks sgteyicdsq nnlykikkgn ivykkgiqks
      781 ydqkigtpte nnyeiayinh gtnpkdasye yailikgtss eqeqfkkdsg ykvlqkdyna
      841 hivqdeiskl rgyalfeage ikndnfiksv dtpsmvliip ekdniklsfv dpdlrlyegi
      901 detqydkdgn mkevsiysrv kwngndsiph vstlvlkgky eiveknenis seiknnetil
      961 kittvyakpv eiilkki
//
LOCUS       WP_235237038             794 aa            linear   BCT 02-MAR-2025
DEFINITION  YcdB/YcdC domain-containing protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235237038
VERSION     WP_235237038.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027569.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16244.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..794
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..794
                     /product="YcdB/YcdC domain-containing protein"
                     /calculated_mol_wt=88023
     Region          <309..490
                     /region_name="YPEB"
                     /note="YpeB sporulation; pfam14620"
                     /db_xref="CDD:405325"
     Region          670..710
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
ORIGIN      
        1 mkknnrtkla vmlsaamlms alpaaafaes anksirtgda gqtlfslegd amadpsgvma
       61 dadvtkeqae alarkyvsip keftlqganf smdvlaggkr nvwgldfvkk angkhvgsiy
      121 vrihadsgql lefnsymdnp sakpayplkv ereaagqial dfigtvaggy knqiqynpdy
      181 gvqllppltg evrhllrydr lvheipyvdn fielevdseg hitrysfrwd dtvkfpkvds
      241 kltpeqanek lrataspels yllpyktqgk repllsyglq piaidaatge vkdqskesyf
      301 rggtvsekpv tdkpigeepk agkvtekqaa davktafklp aeaelnssny seshnegsgg
      361 teaywylnws ikkdgkdagg asasvdgrtg avrsfyiyny nnppqtsgqn mtleqastla
      421 vdavkkqlpw lthelyffkp dpkqyedmng gesrqyyfsf vhkvhgaavq ydsinvsids
      481 stgdvvnyda yisdfaypek apkliskdka vdswltyyrt qltyrlvqqf swngqpipie
      541 kyklmvasge ieadnvktit eaelvyrlvp rlidesvvld avtgewrner tgevtqlekp
      601 kamdieghwa qrqlelmvay kaldikddkv rpnekvtrge likmlvlarn sgqtygllsm
      661 adqsqmkasf ndvsadssyf vyvesaleqn lidvgdgsfn pegkvsrdem aelivralgy
      721 nalanyddif kssfddsaqi tnkgqaaivv glkimtlsng kflpakevtr aeasvaffry
      781 lqsraelqea pirm
//
LOCUS       WP_235237071             614 aa            linear   BCT 02-MAR-2025
DEFINITION  PTS sugar transporter subunit IIA [Paenibacillus alkaliterrae].
ACCESSION   WP_235237071
VERSION     WP_235237071.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00359.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..614
                     /product="PTS sugar transporter subunit IIA"
                     /calculated_mol_wt=66704
     Region          3..454
                     /region_name="MtlA"
                     /note="Phosphotransferase system, mannitol-specific IIBC
                     component [Carbohydrate transport and metabolism];
                     COG2213"
                     /db_xref="CDD:441815"
     Region          472..608
                     /region_name="MtlA2"
                     /note="Mannitol/fructose-specific phosphotransferase
                     system, IIA domain [Carbohydrate transport and
                     metabolism]; COG4668"
                     /db_xref="CDD:443705"
ORIGIN      
        1 mnrinrigrf msnlvfqnia glivlglirv lfsergwfpv paidqildpt lkyylpilfa
       61 ftggrmiggh rggviasfvm mgmiagntsd ysmlmpamai gplagfiiar tdrwlaerip
      121 vglellcynf aagligalla ltcffvvadw fvigmhiiqv gaelvlasny lawvalaiep
      181 gkvlflnnii nhgileplgi hqtkeighsi ffllesnpgp gfglllayfl llkgkekdna
      241 rsslliqgig gihevyfpya lmkpvlimpl iaagltgnwv fqllqaslva tpspgsiill
      301 mimapkgmqi pvlsgvlssa visffgcyfi lrrqqkapap vsdaiilknt pegdiqlseq
      361 prsqtirkiy facdagmgss amgaallrkk lkqaglsvev gncsvdeipq dsdmvisqvq
      421 ltdrarkatp glqhlsintf mdagfydeli lqlqgmalrr ghapqpesgg sgelftekhv
      481 ligaqaedkw qavrqvgelm vglglvkhay iasmierekm lstligngva iphgvdvpen
      541 aivrtgiviv qypegvdfdn gqkayllisv vsadqqgelm srvafmienk dmvkalvqse
      601 seeeavrivr iylq
//
LOCUS       WP_235237095             117 aa            linear   BCT 02-MAR-2025
DEFINITION  autotransporter domain-containing protein, partial [Fusobacterium
            perfoetens].
ACCESSION   WP_235237095
VERSION     WP_235237095.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 117)
  AUTHORS   Oomen,C.J., van Ulsen,P., van Gelder,P., Feijen,M., Tommassen,J.
            and Gros,P.
  TITLE     Structure of the translocator domain of a bacterial autotransporter
  JOURNAL   EMBO J 23 (6), 1257-1266 (2004)
   PUBMED   15014442
REFERENCE   2  (residues 1 to 117)
  AUTHORS   Veiga,E., Sugawara,E., Nikaido,H., de Lorenzo,V. and Fernandez,L.A.
  TITLE     Export of autotransported proteins proceeds through an oligomeric
            ring shaped by C-terminal domains
  JOURNAL   EMBO J 21 (9), 2122-2131 (2002)
   PUBMED   11980709
REFERENCE   3  (residues 1 to 117)
  AUTHORS   Henderson,I.R., Navarro-Garcia,F. and Nataro,J.P.
  TITLE     The great escape: structure and function of the autotransporter
            proteins
  JOURNAL   Trends Microbiol 6 (9), 370-378 (1998)
   PUBMED   9778731
REFERENCE   4  (residues 1 to 117)
  AUTHORS   Pohlner,J., Halter,R., Beyreuther,K. and Meyer,T.F.
  TITLE     Gene structure and extracellular secretion of Neisseria gonorrhoeae
            IgA protease
  JOURNAL   Nature 325 (6103), 458-462 (1987)
   PUBMED   3027577
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015737.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03797.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..>117
                     /product="autotransporter domain-containing protein"
     Region          18..>113
                     /region_name="Autotransporter"
                     /note="Autotransporter beta-domain; pfam03797"
                     /db_xref="CDD:461054"
ORIGIN      
        1 msvvddfgrk agkgewiayg kyvnsdtefd ggkaskgydg ditgtvgmle ygvndttsyg
       61 vvygqgdtev diqgggkldg dntyfggyvk hrtqggfdlt gnvgytksel dlnlats
//
LOCUS       WP_235237149             186 aa            linear   BCT 02-MAR-2025
DEFINITION  PRD domain-containing protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235237149
VERSION     WP_235237149.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Graille,M., Zhou,C.Z., Receveur-Brechot,V., Collinet,B.,
            Declerck,N. and van Tilbeurgh,H.
  TITLE     Activation of the LicT transcriptional antiterminator involves a
            domain swing/lock mechanism provoking massive structural changes
  JOURNAL   J Biol Chem 280 (15), 14780-14789 (2005)
   PUBMED   15699035
REFERENCE   2  (residues 1 to 186)
  AUTHORS   Declerck,N., Dutartre,H., Receveur,V., Dubois,V., Royer,C.,
            Aymerich,S. and van Tilbeurgh,H.
  TITLE     Dimer stabilization upon activation of the transcriptional
            antiterminator LicT
  JOURNAL   J Mol Biol 314 (4), 671-681 (2001)
   PUBMED   11733988
REFERENCE   3  (residues 1 to 186)
  AUTHORS   van Tilbeurgh,H. and Declerck,N.
  TITLE     Structural insights into the regulation of bacterial signalling
            proteins containing PRDs
  JOURNAL   Curr Opin Struct Biol 11 (6), 685-693 (2001)
   PUBMED   11751049
REFERENCE   4  (residues 1 to 186)
  AUTHORS   van Tilbeurgh,H., Le Coq,D. and Declerck,N.
  TITLE     Crystal structure of an activated form of the PTS regulation domain
            from the LicT transcriptional antiterminator
  JOURNAL   EMBO J 20 (14), 3789-3799 (2001)
   PUBMED   11447120
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013070.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00874.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..186
                     /product="PRD domain-containing protein"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=21293
     Region          6..64
                     /region_name="CAT_RBD"
                     /note="CAT RNA binding domain; pfam03123"
                     /db_xref="CDD:460815"
     Region          82..169
                     /region_name="PRD"
                     /note="PRD domain; pfam00874"
                     /db_xref="CDD:459973"
ORIGIN      
        1 marafrvert ignnvlltvd qqteteyvif gkgigfslka getidstdkr iekrfrlddt
       61 eqmkkyhfyl eeidpsviri teriaayikl ktdvdvnpkl ylalpshiqf avyrlrqgmd
      121 ivnpfldetk qsfpveyeia atlaewiseq fhiaipeaei gflafhvysg ihnvpvgqiv
      181 kqaeqq
//
LOCUS       WP_235237230              72 aa            linear   BCT 02-MAR-2025
DEFINITION  3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal
            domain-containing protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235237230
VERSION     WP_235237230.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 72)
  AUTHORS   Abbadi,A., Brummel,M., Schutt,B.S., Slabaugh,M.B., Schuch,R. and
            Spener,F.
  TITLE     Reaction mechanism of recombinant 3-oxoacyl-(acyl-carrier-protein)
            synthase III from Cuphea wrightii embryo, a fatty acid synthase
            type II condensing enzyme
  JOURNAL   Biochem J 345 Pt 1 (Pt 1), 153-160 (2000)
   PUBMED   10600651
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020130.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08541.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..72
                     /product="3-oxoacyl-[acyl-carrier-protein] synthase III
                     C-terminal domain-containing protein"
                     /calculated_mol_wt=7628
     Region          <1..70
                     /region_name="PRK12879"
                     /note="3-oxoacyl-(acyl carrier protein) synthase III;
                     Reviewed"
                     /db_xref="CDD:237245"
ORIGIN      
        1 mriiealcer tgflfdqtlt siqafgntsa asiplaidea vktsriqpgq lmllygfggg
       61 ltqagvilrw sl
//
LOCUS       WP_235237238             472 aa            linear   BCT 02-MAR-2025
DEFINITION  S41 family peptidase [Paenibacillus alkaliterrae].
ACCESSION   WP_235237238
VERSION     WP_235237238.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015531.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03572.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..472
                     /product="S41 family peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=51653
     Region          49..378
                     /region_name="CtpA"
                     /note="C-terminal processing protease CtpA/Prc, contains a
                     PDZ domain [Posttranslational modification, protein
                     turnover, chaperones]; COG0793"
                     /db_xref="CDD:440556"
     Region          387..450
                     /region_name="PGRP"
                     /note="Peptidoglycan-binding (PGRP) domain of
                     peptidoglycan hydrolases [Cell wall/membrane/envelope
                     biogenesis]; COG3409"
                     /db_xref="CDD:442635"
ORIGIN      
        1 mknfttaaak qrfltlcllg allciatgfa lgllwmgnry pmlgepafqq ftvsykkimn
       61 dylngaepkn lingaaegmv asledpysry lveekgdayt qsyegeiygi gaeireeege
      121 yvisgltkga paerggllpg dtliavdgqk isgksfqell giirgeegtd vslqvqrpnq
      181 telisltlkr eaipihsvta elleegiahv tisrfaekta eefegalkel qtkqpikgll
      241 ldmrsnpggl lqptlqiant lipkdkvild vvykeerqti tyksqqekew tvpvavlvng
      301 qsasasevla aalkesagaa vigektygkg vvqafrqfkd gsvlslteaq wktpggtwin
      361 evgvspdyav elpaytklrp laigtdmkvg sygedvktlq lmlkelgyks aeqeglyder
      421 taaavrafql aekleetgef ndktgyklle rlreklkred sqllkglell kk
//
LOCUS       WP_235237239              73 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1450 domain-containing protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235237239
VERSION     WP_235237239.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018944.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07293.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..73
                     /product="DUF1450 domain-containing protein"
                     /calculated_mol_wt=8361
     Region          1..72
                     /region_name="DUF1450"
                     /note="Protein of unknown function (DUF1450); cl11488"
                     /db_xref="CDD:472202"
ORIGIN      
        1 mkkikyckrn fknglkpiyk amkerypdik qkksdclgnc ktcklecfvv vksktvsaps
       61 anqlykrlkk mig
//
LOCUS       WP_235237055             177 aa            linear   BCT 02-MAR-2025
DEFINITION  Gx transporter family protein [Fusobacterium perfoetens].
ACCESSION   WP_235237055
VERSION     WP_235237055.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 177)
  AUTHORS   Zhang,Y.W., Koyama,T., Marecak,D.M., Prestwich,G.D., Maki,Y. and
            Ogura,K.
  TITLE     Two subunits of heptaprenyl diphosphate synthase of Bacillus
            subtilis form a catalytically active complex
  JOURNAL   Biochemistry 37 (38), 13411-13420 (1998)
   PUBMED   9748348
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019099.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07456.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..177
                     /product="Gx transporter family protein"
                     /calculated_mol_wt=19980
     Region          29..172
                     /region_name="COG4769"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:443801"
ORIGIN      
        1 mekvrernsi rrekylifli llslylslae tlipkpfpwl klglanigti ialekfgkkm
       61 avevtmcrii iqgimigtlf spgfiislis giasvnimil lynfrnklsl vsisilsalv
      121 hnfvqllvvy flmfrnmnlh sryimffivg flflgciaga vtgfigekll lrrscik
//
LOCUS       WP_235237245             516 aa            linear   BCT 02-MAR-2025
DEFINITION  stalk domain-containing protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235237245
VERSION     WP_235237245.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 516)
  AUTHORS   Wilmot,C.M., Hajdu,J., McPherson,M.J., Knowles,P.F. and
            Phillips,S.E.
  TITLE     Visualization of dioxygen bound to copper during enzyme catalysis
  JOURNAL   Science 286 (5445), 1724-1728 (1999)
   PUBMED   10576737
REFERENCE   2  (residues 1 to 516)
  AUTHORS   Parsons,M.R., Convery,M.A., Wilmot,C.M., Yadav,K.D., Blakeley,V.,
            Corner,A.S., Phillips,S.E., McPherson,M.J. and Knowles,P.F.
  TITLE     Crystal structure of a quinoenzyme: copper amine oxidase of
            Escherichia coli at 2 A resolution
  JOURNAL   Structure 3 (11), 1171-1184 (1995)
   PUBMED   8591028
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019450.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07833.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..516
                     /product="stalk domain-containing protein"
                     /calculated_mol_wt=55493
     Region          66..158
                     /region_name="Cu_amine_oxidN1"
                     /note="Copper amine oxidase N-terminal domain; pfam07833"
                     /db_xref="CDD:400265"
     Region          203..>365
                     /region_name="DegQ"
                     /note="Periplasmic serine protease, S1-C subfamily,
                     contain C-terminal PDZ domain [Posttranslational
                     modification, protein turnover, chaperones]; COG0265"
                     /db_xref="CDD:440035"
ORIGIN      
        1 mktkliqsll cpllaaalll tplpgtgeat astanaatka vaasasqvqv vvdhkkltls
       61 apayvekgvt fvpmreifta lgatvtwegk tgtiiarkgh ltislqagkk eavingkgvk
      121 lnapsvvrna vtfvpvrfis ealgasvawd raantvsils eeavelakyk ewleeqknip
      181 kltsteivek fdksvvlvmt nraqgsgvvi gdhliltnyh visdavsata ltlygeelai
      241 egvvhydeqa dlaiiktkep ldvaaveiny glndrkgdkv vaigsplglq ntisdglisn
      301 ityeggvryv qtsapidhgs sggalfneyg eligittlgy sdtiadlnfa vsvmhaailv
      361 ddlteemide aaflpstlpd tlvgapltdi qkllaeqfas vvttegeanf tgweakrdsa
      421 gwlvlsadid plfymyygps tadelriwai nlgyelhdll pdekiqvlis ferdygfepr
      481 gfasgevtsl gsdkwrvryp vidmqlkdql hiqvrd
//
LOCUS       WP_235237247             324 aa            linear   BCT 02-MAR-2025
DEFINITION  type I phosphomannose isomerase catalytic subunit [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235237247
VERSION     WP_235237247.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 324)
  AUTHORS   Cleasby,A., Wonacott,A., Skarzynski,T., Hubbard,R.E., Davies,G.J.,
            Proudfoot,A.E., Bernard,A.R., Payton,M.A. and Wells,T.N.
  TITLE     The x-ray crystal structure of phosphomannose isomerase from
            Candida albicans at 1.7 angstrom resolution
  JOURNAL   Nat Struct Biol 3 (5), 470-479 (1996)
   PUBMED   8612079
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042587.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20511.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..324
                     /product="type I phosphomannose isomerase catalytic
                     subunit"
                     /GO_function="GO:0004476 - mannose-6-phosphate isomerase
                     activity [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=34984
     Region          6..323
                     /region_name="ManA"
                     /note="Mannose-6-phosphate isomerase, class I
                     [Carbohydrate transport and metabolism]; COG1482"
                     /db_xref="CDD:441091"
ORIGIN      
        1 mavkpyplqf kaemkeriwg gralegfgle lpegsigegw migdhpngtt kvvngalagt
       61 gldeirekyg rewfgtqgfs ekngrfplli klldcnddls iqvhptdaye glpagelgkt
      121 emwyildakp gakiiyglkd gvdraamesa iaegrimdtl qevsveagda fyipagtvha
      181 lcsgvvvaei qqnsdttyrl hdydrpgldg qmrelhidds lnviayegag aqrmktddav
      241 agewlniats pyfvvekgiv tapwqlaasq esfvilviae gegqlkwadg eqpvkagecf
      301 llpatlgsye lsgsmtvlrs vvpa
//
LOCUS       WP_235237295             531 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235237295
VERSION     WP_235237295.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..531
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=60108
     Region          48..527
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mwkratkrsa ivmsilllli vsvligcrss eevdkqpges ndesltslsy ftinnrpdsl
       61 knynemaayk kleeitgvkv dfkhpasaes tqqfnlmmaa gdlpdviewg wsgvaggpek
      121 yikekkivkl ndyidkhapn lkkvldenpe wkkmimtddg siysfpflrq devnmtffgp
      181 vlrkdwlekl glempetidd whtvltafke kdpngngkad eipllinkdn ftfnafvgaw
      241 gitngfyqvd gkveygpiqp qykeyltlmn dwyeeglidh eyiatdsklq dakvtnnqlg
      301 afigytgssi mrymqlmadk nsdfsltgat ypvhkegevp pfnqaekayn gigaaittsn
      361 enieetvkwl dykygeeghm lfnfgieges yelvedypty tekiiknpeg vsmsdalaky
      421 vpagwsgpfv qakayaeqyt smpeqqesik nwkkgsnera mpivtptqed steyasimnd
      481 vgtyksemin kfitgeepls kfdefaetik amgidralei qqaalerynk r
//
LOCUS       WP_235237134             251 aa            linear   BCT 02-MAR-2025
DEFINITION  acyltransferase domain-containing protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235237134
VERSION     WP_235237134.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 251)
  AUTHORS   Lyu,S.Y., Liu,Y.C., Chang,C.Y., Huang,C.J., Chiu,Y.H., Huang,C.M.,
            Hsu,N.S., Lin,K.H., Wu,C.J., Tsai,M.D. and Li,T.L.
  TITLE     Multiple complexes of long aliphatic N-acyltransferases lead to
            synthesis of 2,6-diacylated/2-acyl-substituted glycopeptide
            antibiotics, effectively killing vancomycin-resistant enterococcus
  JOURNAL   J Am Chem Soc 136 (31), 10989-10995 (2014)
   PUBMED   25095906
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037719.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18082.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..251
                     /product="acyltransferase domain-containing protein"
                     /calculated_mol_wt=28927
     Region          1..115
                     /region_name="NAT_N"
                     /note="N-acyltransferase N-terminal domain; pfam18082"
                     /db_xref="CDD:465640"
     Region          140..251
                     /region_name="GNAT_C"
                     /note="GNAT-like C-terminal domain; pfam18164"
                     /db_xref="CDD:436322"
ORIGIN      
        1 mnldqlcegv rldesarqti nqiqiddnsy sslkrrlisd rqaffetvkq slsyrqmfla
       61 lfarfavday eeyaakgisd diyydtfsdl rlwsakcyqd ygvygiveyq wlqehvrlrl
      121 frlgrlqfqp ialdheavve grkfgkgelv lnvhipeggp ldehsvgqsf eqaktffrgi
      181 psifvcqswl lfpqlsevlp pasnilkfhn qfviyevdrg akqaeerifn kvsadpslye
      241 ertslqqsak a
//
LOCUS       WP_235237298             384 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 88 protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235237298
VERSION     WP_235237298.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 384)
  AUTHORS   Mori,S., Akao,S., Miyake,O., Nankai,H., Hashimoto,W., Mikami,B. and
            Murata,K.
  TITLE     Crystallization and preliminary X-ray analysis of a novel
            unsaturated glucuronyl hydrolase from Bacillus sp. GL1
  JOURNAL   Acta Crystallogr D Biol Crystallogr 59 (Pt 5), 946-949 (2003)
   PUBMED   12777820
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019113.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07470.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..384
                     /product="glycoside hydrolase family 88 protein"
                     /calculated_mol_wt=43807
     Region          21..350
                     /region_name="LanC_like"
                     /note="Cyclases involved in the biosynthesis of
                     lantibiotics, and similar proteins; cl04955"
                     /db_xref="CDD:471159"
ORIGIN      
        1 mstifeeaih svlkkidmkl dkytnqfpdd htannvyqpr kvyredlkag anvgwttgfw
       61 tgmlwlayev tgdekyrkva eihvdsfger mekkigidth dlgflytlsc vsaykitgne
      121 kakgialkaa dhlmtrffek agiiqawgdl ndpnqrgrii idclmnlpll ywasevtgdd
      181 kykdaahrha lksldhivre natthhtyyf dtetgnprfg kthqgysdes cwargqawgv
      241 ygfplsfnyt ndekilngsl kvtnyflgqc pedlvaywdl cfsdgsgevr dssassiavc
      301 glfelaksvq ndetktyyen aafkilqsly enyssrneeq adglllqgvy nrntdsgvne
      361 anlwgdyfyf ealvratrdw klyw
//
LOCUS       WP_235237309             774 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235237309
VERSION     WP_235237309.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..774
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=88696
     Region          42..272
                     /region_name="dCache_1"
                     /note="Cache domain; pfam02743"
                     /db_xref="CDD:460673"
     Region          558..774
                     /region_name="AraC"
                     /note="AraC-type DNA-binding domain and AraC-containing
                     proteins [Transcription]; COG2207"
                     /db_xref="CDD:441809"
     Region          685..767
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
ORIGIN      
        1 mitrrlhikk gsfyrkslil vllitclpvs figislyyag gdrivnelnk shqlqlnqsi
       61 qrmndyfsql elystqlafk pgfdesiktl dfvdqfettk ellkslslmr dtnpfissvf
      121 lylkdqnsli gdaagvrrit daedqklfls llgpiqgiyw knnlnridrp dspqkaivik
      181 lpgggyqehs ygafiiyinq qklnelvekl sskdgaafli dsngeyitsp rlvetgsegs
      241 feealkkril kegrdantfv mkwdgesysv sygkmafmvs aftyisatpl snitapfhsm
      301 sksiivisci gllaalllaw fasrriydpi grlmrliegd kgtegkdeia flesqwkrnm
      361 sqnetmstrl kevlprlreg flnqflqghh yyyseseiie kmnqldwdil dkkfafimvq
      421 lqgmsstegk fsdkdeqlvs faaskivqel asfrithnhv idfhdlsasm livldadete
      481 eqstrelhal seqiiqaind vlsieativi spiadsivqt pdmleqsrka llfrdiertn
      541 qvlsmndfks eesnaaqypf elereitgai rmgqeeeamr ligeflrqlq qnsrkelivh
      601 qsmllllgsi lnaimrndtn pytlyegthl yeellqirep qkmlawfrst lvvpyvqtfs
      661 laydpdlkqm idsllvrlqe eflsgisles yadelqmtpy klsktfkqlt gtnfidyvtr
      721 lrlnrckell lttdlkindi adllryqpsy lirifkkneg mtpgqyrdkf tqqg
//
LOCUS       WP_235237324             425 aa            linear   BCT 02-MAR-2025
DEFINITION  stalk domain-containing protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235237324
VERSION     WP_235237324.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 425)
  AUTHORS   Wilmot,C.M., Hajdu,J., McPherson,M.J., Knowles,P.F. and
            Phillips,S.E.
  TITLE     Visualization of dioxygen bound to copper during enzyme catalysis
  JOURNAL   Science 286 (5445), 1724-1728 (1999)
   PUBMED   10576737
REFERENCE   2  (residues 1 to 425)
  AUTHORS   Parsons,M.R., Convery,M.A., Wilmot,C.M., Yadav,K.D., Blakeley,V.,
            Corner,A.S., Phillips,S.E., McPherson,M.J. and Knowles,P.F.
  TITLE     Crystal structure of a quinoenzyme: copper amine oxidase of
            Escherichia coli at 2 A resolution
  JOURNAL   Structure 3 (11), 1171-1184 (1995)
   PUBMED   8591028
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019450.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07833.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..425
                     /product="stalk domain-containing protein"
                     /calculated_mol_wt=46708
     Region          50..142
                     /region_name="Cu_amine_oxidN1"
                     /note="Copper amine oxidase N-terminal domain; pfam07833"
                     /db_xref="CDD:400265"
     Region          134..425
                     /region_name="FecB"
                     /note="ABC-type Fe3+-citrate transport system, periplasmic
                     component [Inorganic ion transport and metabolism];
                     COG4594"
                     /db_xref="CDD:443650"
ORIGIN      
        1 mfksmyryla lsiaiilafg avpytaaaaa aitvvldgnk isfdvspktv sgrtvvpyrt
       61 laekigadvk wdqkagkitv vkgkrtvelt vnskvgkvdg kavamdtapv iqngrtlvpl
      121 rflgeslglw vswnaaaktv sieskktith amgktalnsv pqrvvvlfng mvdisltlgv
      181 kpvgaveswv qqpwyhylra dmggvknlgn eiqpnleaiv alkpdliigs klrhekiydq
      241 lskiaptmmt tdvfdwktnm viasealnkq deadafmadw nkrvanfksk mgnrlktevs
      301 iirfqpdgsa rfyvtgfagt ilqelgmarp kaqqvegkvv vglsskeqip mldgdvifdi
      361 tsdwagdeks fksqqdwtsn plwknlkgik ngkyykvndv twnmsggata akmmmddlyf
      421 yfdle
//
LOCUS       WP_235237358             320 aa            linear   BCT 02-MAR-2025
DEFINITION  mannonate dehydratase [Paenibacillus alkaliterrae].
ACCESSION   WP_235237358
VERSION     WP_235237358.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015727.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03786.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..320
                     /product="mannonate dehydratase"
                     /EC_number="4.2.1.8"
                     /GO_function="GO:0008927 - mannonate dehydratase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006064 - glucuronate catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=35701
     Region          14..316
                     /region_name="AP2Ec"
                     /note="AP endonuclease family 2; These endonucleases play
                     a role in DNA repair. Cleave phosphodiester bonds at
                     apurinic or apyrimidinic sites; the alignment also
                     contains hexulose-6-phosphate isomerases, enzymes that
                     catalyze the epimerization of...; cl23721"
                     /db_xref="CDD:474032"
ORIGIN      
        1 mklaealgth etrlwtlckq mginyavtgl pkaengftpw dyvnllhmkq rfenfgfkae
       61 viearppank iklglpgrde eiaviqelir nmgelgipvw cydymaefnw frtststrtr
      121 ggalvssydh slmknapfte napvsedqlw enlvyylkai vpvaekakvk lalhpddppi
      181 spirgvsrii tsadalqrvi dlvpseysgv tlcqgtlaaa gddipatirr fakqdklffv
      241 hfrdvrgtae kfeetfhddg ktdmfevmkt yaevgydgpa rpdhvptmag edngnpgyev
      301 lgrlfgvgyi kglmeaaykk
//
LOCUS       WP_235237412             226 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4956 domain-containing protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235237412
VERSION     WP_235237412.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027640.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16316.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..226
                     /product="DUF4956 domain-containing protein"
                     /calculated_mol_wt=25472
     Region          39..>142
                     /region_name="MgtC"
                     /note="MgtC family; cl15893"
                     /db_xref="CDD:472842"
ORIGIN      
        1 mgenvnfqdl fkksmlhlea frsisyidvl lglfasfgig lfifyiykkt frgvvysyny
       61 nvtfvlmtmi taliimtist niilslgmvg alsivrfrta vkdpldivym fwsisagiat
      121 gakmypvali gsvgvglall wlsrrkvreq pylliirhse taisdvriql rkltytlksk
      181 tvrkdyiemt ieirlrddnt afvnvlsaie gvndvsliny tgdyaq
//
LOCUS       WP_235237448             355 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF294 nucleotidyltransferase-like domain-containing protein
            [Paenibacillus alkaliterrae].
ACCESSION   WP_235237448
VERSION     WP_235237448.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015410.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03445.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..355
                     /product="DUF294 nucleotidyltransferase-like
                     domain-containing protein"
                     /GO_function="GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA]"
                     /calculated_mol_wt=39965
     Region          42..167
                     /region_name="DUF294"
                     /note="Putative nucleotidyltransferase DUF294; pfam03445"
                     /db_xref="CDD:460919"
     Region          209..346
                     /region_name="DUF294_C"
                     /note="Putative nucleotidyltransferase substrate binding
                     domain; pfam10335"
                     /db_xref="CDD:463050"
ORIGIN      
        1 msdpvrlqll kqigsadhve glrslrdqvh eqmeallpth pveqfneqin evhdavirrs
       61 inlaeaemar lgkgsppvpy ayllfgsggr keqtlssdqd sgvvyedpvs dsadvkqyfk
      121 elsqiivsnl qsvgyppceg nvlssnsewc lslsewsrkl dhwfdepawe avrylliiad
      181 grciygesrl vdalkdsfft dmlnhpiilq rmldntlrhk vlvgifgqll kerygedags
      241 ldikygayip mvnsirllsv qvgiretatl driamlveag qmsesdaavy kqafrlllrl
      301 rlmtteqked glyanngkls srkltkemtd elksslrlgk klqravfkqt mgrlt
//
LOCUS       WP_235237521             557 aa            linear   BCT 02-MAR-2025
DEFINITION  GMC oxidoreductase [Paenibacillus alkaliterrae].
ACCESSION   WP_235237521
VERSION     WP_235237521.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05199.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..557
                     /product="GMC oxidoreductase"
                     /GO_function="GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /calculated_mol_wt=61134
     Region          2..46
                     /region_name="LysM"
                     /note="Lysin Motif is a small domain involved in binding
                     peptidoglycan; cd00118"
                     /db_xref="CDD:212030"
     Region          88..557
                     /region_name="BetA"
                     /note="Choline dehydrogenase or related flavoprotein
                     [Lipid transport and metabolism, General function
                     prediction only]; COG2303"
                     /db_xref="CDD:441878"
ORIGIN      
        1 mriylahdgd tlrtisqkyd iaiedllswn pviaypdlnv agmqirfpss ppgsstlpne
       61 pfcdipaplg pgqyldqwip ltplekmaqt dydviivgtg pgggavlwrl ceqwrksgkr
      121 iaiveagdlv lptnaqnvpt lngdrlyrfm rnpklwkpia aakpsgtgdl slsasaqhyf
      181 enyiglggrs ifwnavtprm hpldiaqwpv ssaemdryyt iaeqimtisq dysknssfse
      241 illnrllsng fpetvpqpla admqptkygy irsnvffssm affawalsfg sfdlavkarv
      301 tkvladngka vgvkvitrdk qtydlkgktv vlsastfetp rillysgipg raighyltth
      361 srvngigtiq tadfpetlgv lalliprtae heyqiqigas yfdylyelkp mleqanlgyg
      421 asgvvesrye nyvalnplrv deygvpelev qfsysakdke virrmgegik ramaasqatl
      481 tsvctlatgl vyhdmgtcrm gydpaasvtd pygqvhgvqg lyvadnsvip tsgaanptlt
      541 tvalairtad ylmkqlr
//
LOCUS       WP_235237541             365 aa            linear   BCT 02-MAR-2025
DEFINITION  FtsK/SpoIIIE domain-containing protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235237541
VERSION     WP_235237541.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 365)
  AUTHORS   Begg,K.J., Dewar,S.J. and Donachie,W.D.
  TITLE     A new Escherichia coli cell division gene, ftsK
  JOURNAL   J Bacteriol 177 (21), 6211-6222 (1995)
   PUBMED   7592387
REFERENCE   2  (residues 1 to 365)
  AUTHORS   Wu,L.J. and Errington,J.
  TITLE     Bacillus subtilis SpoIIIE protein required for DNA segregation
            during asymmetric cell division
  JOURNAL   Science 264 (5158), 572-575 (1994)
   PUBMED   8160014
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013727.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01580.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..365
                     /product="FtsK/SpoIIIE domain-containing protein"
                     /GO_function="GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=41362
     Region          <106..>289
                     /region_name="FtsK"
                     /note="DNA segregation ATPase FtsK/SpoIIIE or related
                     protein [Cell cycle control, cell division, chromosome
                     partitioning]; COG1674"
                     /db_xref="CDD:441280"
ORIGIN      
        1 magdkevwll ptinkeivyp wghrflinlp vgkssrdvim akqalsealr kdvdikfdng
       61 lildifnekl pemvtyhyvq rkdwkvplgi nqrhdvhyfd fdapyphfvd gglsgsgksc
      121 iirimltsli mnkhddlqly ladmkegvef mifehiecvr gfattlkell qvastveaim
      181 lerlttmrkn nmrkwnndkc vlcidemsdl ietdhdpdkr lkqaikaklr aisakgraag
      241 cwlilstqrp tvnsvpgdir tnistaiafr trdeiqsrti ldapdaaylp dipgraiyqh
      301 gvkqeiiqcf ylddvdaeil lesaprkeia hahnesksdp giqqpainet avktkkmgkr
      361 pvvlk
//
LOCUS       WP_235237607             231 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Bordetella
            bronchiseptica].
ACCESSION   WP_235237607
VERSION     WP_235237607.1
KEYWORDS    RefSeq.
SOURCE      Bordetella bronchiseptica
  ORGANISM  Bordetella bronchiseptica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Bordetella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Bordetella bronchiseptica"
                     /db_xref="taxon:518"
     Protein         1..>231
                     /product="Ig-like domain-containing protein"
     Region          <21..>231
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 msasdaagnr aaasaeftdq vdktaprapt lqlatdtatg rvtasgkaep gatveitwpd
       61 qtrvtvvadt sgaysatsaa dmpdgaitav aadragntga ptrqryidsv drtaptlgtp
      121 svstaadtgr vsvtgmtepg arvqveipge aprivtadaa grysvvsagd vlqsgtvrvt
      181 atdahgnasa pahlryqdqv dktapaspsl tvredaasgr atvtgqaepg a
//
LOCUS       WP_235237635             537 aa            linear   BCT 02-MAR-2025
DEFINITION  PTS transporter subunit EIIC [Fusobacterium varium].
ACCESSION   WP_235237635
VERSION     WP_235237635.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 537)
  AUTHORS   Reizer,J., Paulsen,I.T., Reizer,A., Titgemeyer,F. and Saier,M.H.
            Jr.
  TITLE     Novel phosphotransferase system genes revealed by bacterial genome
            analysis: the complete complement of pts genes in mycoplasma
            genitalium
  JOURNAL   Microb Comp Genomics 1 (3), 151-164 (1996)
   PUBMED   9689210
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02378.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..537
                     /product="PTS transporter subunit EIIC"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /calculated_mol_wt=58383
     Region          2..525
                     /region_name="PTS-II-BC-glcB"
                     /note="PTS system, glucose-specific IIBC component;
                     TIGR02002"
                     /db_xref="CDD:273923"
ORIGIN      
        1 mkkgfsllqr vgrafmlpia vlpmagillg vggaftssai vdtynltfle pgtllnhili
       61 lflnagafif anlsvifavg vaiglahqnk etaalsallg fllfhtvigt vlgfmgqtad
      121 tttvqalmtk gmtygeaigk aslytkelgi ftlqtgvlgg iicgcfsafi tnrfsnrtlp
      181 dylaffsgnr lvpvltmvff iplgvivpfi wptvfgvvvk ageaftamgp lgtflygmtg
      241 rllnvfglhh avyplfwyte lggtmeiagq miaggqkiff aqladpstih ysadatrtmt
      301 ggflpmmfgl paaalamyrc adadnkakik gilvsaalts fltgitepie ftflfvappl
      361 yvihailegi syglmhflnv avgitfsrgi idftffgllq gmaktsyqwi lilgpiysig
      421 yyfifkfmie kfnymtpgrk ggenklytrk dyqgktdndd fideivkalg gadniegida
      481 citrlrvtvk detkvvddnv wkelksqgvi ragkgiqiiy gtqaeiyknk iikkykl
//
LOCUS       WP_235237643             272 aa            linear   BCT 02-MAR-2025
DEFINITION  putative RNA methyltransferase [Fusobacterium varium].
ACCESSION   WP_235237643
VERSION     WP_235237643.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 272)
  AUTHORS   Das,K., Acton,T., Chiang,Y., Shih,L., Arnold,E. and Montelione,G.T.
  TITLE     Crystal structure of RlmAI: implications for understanding the 23S
            rRNA G745/G748-methylation at the macrolide antibiotic-binding site
  JOURNAL   Proc Natl Acad Sci U S A 101 (12), 4041-4046 (2004)
   PUBMED   14999102
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF045339.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21302.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..272
                     /product="putative RNA methyltransferase"
                     /calculated_mol_wt=31119
     Region          3..253
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(91..97,119..120,140..142,158)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
ORIGIN      
        1 miicpvckki ldkdgktyrc ennhcfdegk qgylnlllsn qkhsktpgdd kemvlsrkgf
       61 lekgyykiis ekvnelvldn rtsddveild igcgegyytg rlkkilnerg iksnitgidi
      121 skeavicaak tykniewiva satniplede sldfiicmfa kiipeekmrt lkkggklivv
      181 stgenhllel kkvvydqvrt efyspvedlk ifkhiktvnc tgktfikene sirnlfdmtp
      241 ykwrspkegi eklfmlnele itidvnvdif ek
//
LOCUS       WP_235237694             506 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Paenibacillus alkaliterrae].
ACCESSION   WP_235237694
VERSION     WP_235237694.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 506)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..506
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=57448
     Region          4..124
                     /region_name="REC_YesN-like"
                     /note="phosphoacceptor receiver (REC) domain of YesN and
                     related helix-turn-helix containing response regulators;
                     cd17536"
                     /db_xref="CDD:381091"
     Site            order(9..12,15..17,20,106..107)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381091"
     Region          157..271
                     /region_name="GGDEF_2"
                     /note="GGDEF-like domain; pfam17853"
                     /db_xref="CDD:465533"
     Region          263..503
                     /region_name="AraC"
                     /note="AraC-type DNA-binding domain and AraC-containing
                     proteins [Transcription]; COG2207"
                     /db_xref="CDD:441809"
     Region          421..503
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
ORIGIN      
        1 myrvfivdde pfiieglydi idwsefglei agsaengqda lallmdlpvd illtdismpi
       61 mdglslirea rrfrpdlkvi ilsgyndfqy ikeglklgve nyllkpinid elqetlanti
      121 dklnatradr lfsdydiril rdnilyrwlt griapnelne rtdmlqirld rpylvtavlr
      181 tedqfepsyd aaqrlavqds smlpfvdidg dlvivfmfed pvagkqeaid kllgmqkrls
      241 sgqsrislgs veamgegapr syanakkaqe yfllfdepti ldygllpetg gtahaltdpl
      301 dwpsyaklik akdidglhqa iaaefeqyqt lagatpafiq smaiemlirf kmelkeikqa
      361 dqpelykpgf vkvmqaetid elaaivkeaa sltvdslmrd vkspiiqlll nyvhehyaqa
      421 lslkslgqqy nihpvylghl fqketnesft eylnkyrigk akemlkethl kvqeiatqvg
      481 ywetgyfykq fkkyvgispt dykgll
//
LOCUS       WP_235237746             634 aa            linear   BCT 02-MAR-2025
DEFINITION  VWA domain-containing protein [Fusobacterium varium].
ACCESSION   WP_235237746
VERSION     WP_235237746.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024909.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13519.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..634
                     /product="VWA domain-containing protein"
                     /calculated_mol_wt=71439
     Region          3..619
                     /region_name="Cob-chelat-sub"
                     /note="cobaltochelatase subunit; TIGR02442"
                     /db_xref="CDD:274135"
ORIGIN      
        1 mifpfvaveg qekikkalll nivnkriggv lingekgtak stlvrglgel fseikvinlp
       61 lnitednlvg sidiektmks gkkvfqegll kkchnnilyv deinllgdsi vssilevasr
      121 einyverdgv sfsheckfll igtmnpeegd lrpqlldkfg lyvnaagted ilervkvikk
      181 rleyennpik fcekykeeee ilkekvehak eriekikvsd qimniavkiv eeantvgnra
      241 eiilvetaks laaldgrsyl niddlkeaav fvlphrtnqk hestsqskgn eledknqete
      301 eeknnsedni tqekeeevpe epnkenfdng ndsenieesd rdekknknne naeseeefgi
      361 geifkvkdil iddvhdtrkr agtgkrcktk sgslqgryik stlpkgkird fafdatiraa
      421 apyqkknken nlminikkeh irvkvrekrt gasilfvvds sgsmgvkkrm eavkgavmsl
      481 lkdayekrdr vgmvsfrrdk aeellpitrs idlaqkklek latggktpla egiakaytii
      541 knemrkdkev vplivflsdg kgnfsasgkd pikeslemae kiknegirai vidteegfik
      601 lemaktlsev mkadyyklen lrsedmlkli kdni
//
LOCUS       WP_235237774             171 aa            linear   BCT 02-MAR-2025
DEFINITION  BMC domain-containing protein [Fusobacterium varium].
ACCESSION   WP_235237774
VERSION     WP_235237774.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 171)
  AUTHORS   Kerfeld,C.A., Sawaya,M.R., Tanaka,S., Nguyen,C.V., Phillips,M.,
            Beeby,M. and Yeates,T.O.
  TITLE     Protein structures forming the shell of primitive bacterial
            organelles
  JOURNAL   Science 309 (5736), 936-938 (2005)
   PUBMED   16081736
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013129.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00936.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..171
                     /product="BMC domain-containing protein"
                     /GO_component="GO:0031469 - bacterial microcompartment
                     [Evidence IEA]"
                     /calculated_mol_wt=18802
     Region          3..69
                     /region_name="BMC"
                     /note="Bacterial Micro-Compartment (BMC) domain; cl01982"
                     /db_xref="CDD:445628"
     Site            order(8,11,20,23..24,30,35,40)
                     /site_type="other"
                     /note="Hexamer interface [polypeptide binding]"
                     /db_xref="CDD:132893"
     Site            35
                     /site_type="active"
                     /note="Hexagonal pore residue [active]"
                     /db_xref="CDD:132893"
     Region          90..>145
                     /region_name="BMC_PduT_repeat2"
                     /note="1,2-propanediol utilization protein T (PduT),
                     Bacterial Micro-Compartment (BMC) domain repeat 2;
                     cd07054"
                     /db_xref="CDD:132894"
     Site            order(95,98,107,110..111,117,122,129)
                     /site_type="other"
                     /note="putative hexamer interface [polypeptide binding]"
                     /db_xref="CDD:132894"
     Site            122
                     /site_type="active"
                     /note="putative hexagonal pore [active]"
                     /db_xref="CDD:132894"
ORIGIN      
        1 mktigiaefn nipeglknld ivlkkadvvv ykagvtcpgk yyfiiygdne dvksafqevt
       61 geakfeiisg vsnkvieile krnkkeless igiiefftis esvkaldmil kgntvetlkl
      121 ilgsgiagks yfvitgdtss vteavnsidk kiryreksli nnpdkniikf i
//
LOCUS       WP_235237776             236 aa            linear   BCT 02-MAR-2025
DEFINITION  glucosaminidase domain-containing protein [Fusobacterium varium].
ACCESSION   WP_235237776
VERSION     WP_235237776.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 236)
  AUTHORS   Nambu,T., Minamino,T., Macnab,R.M. and Kutsukake,K.
  TITLE     Peptidoglycan-hydrolyzing activity of the FlgJ protein, essential
            for flagellar rod formation in Salmonella typhimurium
  JOURNAL   J Bacteriol 181 (5), 1555-1561 (1999)
   PUBMED   10049388
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013954.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01832.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..236
                     /product="glucosaminidase domain-containing protein"
                     /GO_function="GO:0004040 - amidase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=27008
     Region          1..235
                     /region_name="Bax"
                     /note="Uncharacterized FlgJ-related protein [General
                     function prediction only]; cl27488"
                     /db_xref="CDD:474928"
ORIGIN      
        1 mrkkifilli flfsftafsg ttineselkn kqfylnkrid fsaiqgnerk klfiqtlvpi
       61 ienieteikt ekeqvkkiie kgvrtqeekd ilnnafakyk vknmntdell nkmivpptsl
      121 iiaqaslesg wgtsnvakka nnlfgmksfs kdqnrsikvg kgtyykkydt iddsvkdyim
      181 tlarhgaykq lraaivngen slklvkhlnn yseireeygr klttiikand llehda
//
LOCUS       WP_235237785             562 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235237785
VERSION     WP_235237785.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 562)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 562)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 562)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 562)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..562
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=61368
     Region          56..547
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mknkrvksts lllavvliav tlfgcsgnnn nggsgsgnvp sdnngtsnsg tsqkevklkv
       61 lhnwngstga dvdmtavaev ikektgvtve weytkgseve klntifatqd lpdiytgpaw
      121 ggeldgiika akedqlvdlt dkldkypnla kaiakenvpp alyekafday ggkqfllyqn
      181 hpatpedamd wlygfyvrkd iaekigvdpq svktkddlys flqkikdagl eengmpvipl
      241 ggfhngwavg igntmfygsg yvdkgdgtle nsfftkayed ytlyyrklla eglldpetft
      301 qtapianeki kqgriavlaa hypaildask dyvkahpgsd yvpvgplera gaesdrpadl
      361 siqgnnvtvi mkksknvdaa lrlleylasd egfllvrygv qgvhwdmeng kpaakkewfd
      421 kftadttgkl kknegigigf esmsgqdrin svgsgdiwsd qdrlaamesa rkilrpngis
      481 visaynpgdv mmkspqweml kpsmdkigdv wqvaifaksd eaalkvindl reqmnktgyp
      541 eaiqfvndnl kgkeavmfgm pn
//
LOCUS       WP_235237877             142 aa            linear   BCT 02-MAR-2025
DEFINITION  HNH endonuclease [Paenibacillus alkaliterrae].
ACCESSION   WP_235237877
VERSION     WP_235237877.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 142)
  AUTHORS   Krishna,S.S., Majumdar,I. and Grishin,N.V.
  TITLE     Structural classification of zinc fingers: survey and summary
  JOURNAL   Nucleic Acids Res 31 (2), 532-550 (2003)
   PUBMED   12527760
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024784.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13392.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..142
                     /product="HNH endonuclease"
                     /calculated_mol_wt=16143
     Region          84..131
                     /region_name="HNHc"
                     /note="HNH nucleases; HNH endonuclease signature which is
                     found in viral, prokaryotic, and eukaryotic proteins. The
                     alignment includes members of the large group of homing
                     endonucleases, yeast intron 1 protein, MutS, as well as
                     bacterial colicins, pyocins, and...; cl00083"
                     /db_xref="CDD:469607"
ORIGIN      
        1 mkieirgrkk ilvtecaycg ddiekpaytr tleakrhfcd rscnlkkmne elnptrmtfe
       61 mrmavrrghl gkgqgkaypk ilgrhahria aevklgrall pgevvhhede nrqnysleni
      121 tilssqkeha klhaaknrgd ak
//
LOCUS       WP_235237888             887 aa            linear   BCT 02-MAR-2025
DEFINITION  PD-(D/E)XK nuclease family protein [Fusobacterium varium].
ACCESSION   WP_235237888
VERSION     WP_235237888.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 887)
  AUTHORS   Kinch,L.N., Ginalski,K., Rychlewski,L. and Grishin,N.V.
  TITLE     Identification of novel restriction endonuclease-like fold families
            among hypothetical proteins
  JOURNAL   Nucleic Acids Res 33 (11), 3598-3605 (2005)
   PUBMED   15972856
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024117.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12705.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..887
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..887
                     /product="PD-(D/E)XK nuclease family protein"
                     /calculated_mol_wt=105477
     Region          <509..820
                     /region_name="AddB"
                     /note="ATP-dependent helicase/DNAse subunit B
                     [Replication, recombination and repair]; COG3857"
                     /db_xref="CDD:443066"
     Region          <784..884
                     /region_name="Cas4"
                     /note="CRISPR/Cas system-associated exonuclease Cas4, RecB
                     family [Defense mechanisms]; COG1468"
                     /db_xref="CDD:441077"
ORIGIN      
        1 maekkinfry igygnsfade ywkkedkves nlylfsdnrm ksvfvkkmkk difskqpefl
       61 tmnefkerif isdkivlkea krilafyksi pqdvkeelni ksyydiidfa nnffayyrem
      121 nindikeidn ihnwqekyfy yfnrikesfd ilcqeynyip ndwledikyf qtkwlekyrk
      181 iifvdvieyp eiykkvinkl leekeieiil qlengdfdek nlkiekitlp etspskiyvy
      241 qskdeleesm sliylfkgkg kngdiyspvp enntyhnifp ryfgksqavt mndtklykfl
      301 niqlnilmnm eeklgrvyli safkkafddr vfreyyslgi ediavlnnfm kedykyissk
      361 iletqeaqyy fsdnmdfknk meniffdlns iielksvddi yeyfkkqinl ekfiekeygs
      421 vfekffeifg imksnenmsi hknfnsyfdg slgnslfrlv iqymkdivia snekvdsera
      481 ivknieaarf areskslyke kkmfgetnff mditgdilpg nigdnlifte kqrkdmgmms
      541 reekreikky rffqavfsni naviftkkne dkgidvspfl delcikyele ikkvpvdlng
      601 siealknavf ekekgypkfe ieefpknned fknrklnmga ydysnlkqcr lkfyfqkmnn
      661 leylcppees dissrffgil vhkvleeivk gmwkeviskg nfnidnnyik eilskhfsyn
      721 rakiplhmdn ycseimipii asniekffny ieakysniei krfqgekgvy etkpfidgdi
      781 qiflrgvadl vieseignei idyktggank eqldyysiil yedekkaqks ifnvwkgsie
      841 aheeikltke alkediidfl ksneyslaek ttvcnsceyi kicgrgr
//
LOCUS       WP_235237377             123 aa            linear   BCT 02-MAR-2025
DEFINITION  sensory rhodopsin transducer [Paenibacillus alkaliterrae].
ACCESSION   WP_235237377
VERSION     WP_235237377.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 123)
  AUTHORS   De Souza,R.F., Iyer,L.M. and Aravind,L.
  TITLE     The Anabaena sensory rhodopsin transducer defines a novel
            superfamily of prokaryotic small-molecule binding domains
  JOURNAL   Biol Direct 4, 25;discussion25 (2009)
   PUBMED   19682383
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 123)
  AUTHORS   Jung,K.H., Trivedi,V.D. and Spudich,J.L.
  TITLE     Demonstration of a sensory rhodopsin in eubacteria
  JOURNAL   Mol Microbiol 47 (6), 1513-1522 (2003)
   PUBMED   12622809
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018767.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07100.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..123
                     /product="sensory rhodopsin transducer"
                     /calculated_mol_wt=13722
     Region          1..121
                     /region_name="COG4288"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:443429"
ORIGIN      
        1 mfqargekhw fipdgyippd stgsltshes vcvlnissee alirftiffe drepmedilv
       61 vvqgrrtkhi rtsslmknga pipigvpyai evqsdipiiv qysrldstqa entlmstiay
      121 pik
//
LOCUS       WP_235237992             574 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase family 18 protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235237992
VERSION     WP_235237992.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 574)
  AUTHORS   Perrakis,A., Tews,I., Dauter,Z., Oppenheim,A.B., Chet,I.,
            Wilson,K.S. and Vorgias,C.E.
  TITLE     Crystal structure of a bacterial chitinase at 2.3 A resolution
  JOURNAL   Structure 2 (12), 1169-1180 (1994)
   PUBMED   7704527
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00704.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..574
                     /product="glycosyl hydrolase family 18 protein"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=64249
     Region          68..162
                     /region_name="Cu_amine_oxidN1"
                     /note="Copper amine oxidase N-terminal domain; pfam07833"
                     /db_xref="CDD:400265"
     Region          259..566
                     /region_name="GH18_chitinase-like"
                     /note="The GH18 (glycosyl hydrolase, family 18) type II
                     chitinases hydrolyze chitin, an abundant polymer of
                     beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a
                     major component of the cell wall of fungi and the
                     exoskeleton of arthropods. Chitinases have...; cl10447"
                     /db_xref="CDD:471972"
     Site            order(262,286,358,360,362,424..425,468,553)
                     /site_type="active"
                     /db_xref="CDD:119353"
ORIGIN      
        1 mynraprrrg nrgvrsfmfl fiaaalavfa wygymqfipn gdlvdpgyks eypifvkgke
       61 aeqgalienn evklplaslq qvlgedkpir yepdsgsiif ttankvlrlk tdslegtinq
      121 kpynltitae tsndtvyipa aplkelyglq vefvqdsgiv tilsagdtiq laeimpekgt
      181 amrirptira pfienaaqtm tvriweeqdg wllvqstsgl vgyinkkdvr lttidqvpep
      241 arepafvawk vmgnkinmtw eavyerkidt skigsmqgvn vvsptwfela ddkgtikgka
      301 dpayvkwahq qgmqiwalfs nafepdrttk alasaetrfs miqqligfae vynlqginid
      361 fenvhtadkd nfvqfvrelt pllheqglvv sidvtpksns emwslfldra vlgsvvdymm
      421 vmaydehwas spksgsvasl pwteksivri mkedgvpask lmlsmplytr iwtekkgddg
      481 kvtvtskavg mdhvkaiiae kklkpvldae agqnyveyte dgalnriwie ddlsmkarva
      541 lvrkydlagv atwqrgfqta siwktiddai kirp
//
LOCUS       WP_235237996             371 aa            linear   BCT 02-MAR-2025
DEFINITION  alanine racemase [Paenibacillus alkaliterrae].
ACCESSION   WP_235237996
VERSION     WP_235237996.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 371)
  AUTHORS   Shaw,J.P., Petsko,G.A. and Ringe,D.
  TITLE     Determination of the structure of alanine racemase from Bacillus
            stearothermophilus at 1.9-A resolution
  JOURNAL   Biochemistry 36 (6), 1329-1342 (1997)
   PUBMED   9063881
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013345.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01168.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..371
                     /product="alanine racemase"
                     /EC_number="5.1.1.1"
                     /calculated_mol_wt=40013
     Region          15..366
                     /region_name="Dsd1"
                     /note="D-serine deaminase, pyridoxal phosphate-dependent
                     [Amino acid transport and metabolism]; COG3616"
                     /db_xref="CDD:442834"
ORIGIN      
        1 mtrtnseisn dtpatpfviv dldvvernig rmaeklaqyn ikhrphikth kslrlanlql
       61 aagaigitva klaeaevfad ggigdiliaf piigernlkr lerlhtriqv avtvdsweaa
      121 qglstigvrt nkpvrvliel dgglhrggrq pgndivefal rirelpglqi egimayfgli
      181 yqsgdpqaia savetesisi aetvsnlrqa gitidivssg stpaaklceh vrgitevrag
      241 nyifndvsav qmgiaeeadc alrvaatvvs ipqpgmatid agtktltsdk ahhregfgii
      301 vgrpeiyiaa lneehgmlrf dpervalsig drieiipnhs cvipnlndsi ygmrkgvvte
      361 rikidargsn y
//
LOCUS       WP_235237628             316 aa            linear   BCT 02-MAR-2025
DEFINITION  2-dehydro-3-deoxygalactonokinase [Fusobacterium varium].
ACCESSION   WP_235237628
VERSION     WP_235237628.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 316)
  AUTHORS   Szumilo,T.
  TITLE     Separation and some properties of D-galactonate pathway enzymes
            from Mycobacterium sp. 607
  JOURNAL   Acta Microbiol Pol 32 (1), 47-52 (1983)
   PUBMED   6194665
REFERENCE   2  (residues 1 to 316)
  AUTHORS   Szumilo,T.
  TITLE     Pathway for D-galactonate catabolism in nonpathogenic mycobacteria
  JOURNAL   J Bacteriol 148 (1), 368-370 (1981)
   PUBMED   7287628
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016894.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05035.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..316
                     /product="2-dehydro-3-deoxygalactonokinase"
                     /GO_function="GO:0008671 -
                     2-dehydro-3-deoxygalactonokinase activity [Evidence IEA]"
                     /GO_process="GO:0034194 - D-galactonate catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=35911
     Region          4..313
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mkkivtidag tsnlririve gkniifkkke nygvkigkek fknelykllk ecikenkiek
       61 eeieciiasg mitsalglme iehlyvpvsl ekfsksmvkv kffefeiyli tgikvekeyf
      121 keehlksidv irgeevevfg ileeikvdep tlvilpgshn kfievsdgni vdllttmsge
      181 iydvmtkyti lktsvdekfa dkiekkylel gnkigkkygi nqgsfmlrgl dlsekltine
      241 ksnyllglvl seditslekn gylkkykkli iaggniiakg lfellsemkl dndiriissn
      301 elatkgalki weqskk
//
LOCUS       WP_235237836              89 aa            linear   BCT 02-MAR-2025
DEFINITION  HU family DNA-binding protein [Fusobacterium varium].
ACCESSION   WP_235237836
VERSION     WP_235237836.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 89)
  AUTHORS   Vis,H., Mariani,M., Vorgias,C.E., Wilson,K.S., Kaptein,R. and
            Boelens,R.
  TITLE     Solution structure of the HU protein from Bacillus
            stearothermophilus
  JOURNAL   J Mol Biol 254 (4), 692-703 (1995)
   PUBMED   7500343
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00216.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..89
                     /product="HU family DNA-binding protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0030527 - structural constituent of
                     chromatin [Evidence IEA]"
                     /calculated_mol_wt=10253
     Region          2..87
                     /region_name="HU_IHF"
                     /note="DNA sequence specific (IHF) and non-specific (HU)
                     domains; cl00257"
                     /db_xref="CDD:444792"
     Site            order(3..4,43,45..47,49,51,55,57..58,76,78,80..85)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:259853"
     Site            order(6,9..10,15,24..27,29..31,33..35,37..38,42..46,49,
                     77..79,81,83,87)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:259853"
ORIGIN      
        1 mnkkelakvy skmskegtni kealkeidif tktveealli kgyikfirrg tfmvlkkkpr
       61 tvsnpstkel mriypkntvk fktskklve
//
LOCUS       WP_235238005             932 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Fusobacterium varium].
ACCESSION   WP_235238005
VERSION     WP_235238005.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024867.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13476.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..932
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..932
                     /product="AAA family ATPase"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /GO_process="GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /calculated_mol_wt=109518
     Region          1..930
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
ORIGIN      
        1 mkinrihlen yrihdkldve fdsginlllg engkgkssil eaigyalfds elrggnqrea
       61 ikygkksaki eieftgidge dyivtrkipg stsiykkdnp dfqligkedr irelcgikgd
      121 lkgiydnviv akqnefissf kekdnereki fnkvfntdiy kkiyegysrd avnryekdie
      181 ierssmenia eimedpadik eklefekgra keynsslall neekskvkef lnsynalnie
      241 iekltgeina lsesiknkne eftkvansik eseisekivk enrekyeeyq kysqeinilk
      301 irkkelekik eecllhekei nsleklnsei dgeikvfenk kennesllle rknklfeiek
      361 eiidkkgksv eykselskit pllikleefe kklevgenni knfeikleek ledinkekek
      421 rkylmsenle nqlseleehe knkklledei lkkdlllken eeafemlkts ycpylkeqck
      481 nldgknidey fkdkrekyik eieekkntvk einnklinkn eimekiirld tlskeideke
      541 vefiqeklkl etgkskiene klklknfkle nnieskekls eikitlktki dsldllksee
      601 ikggiekeie nlnkniniel knieekkivi keniktleek rnflnenkif sneliiintn
      661 idklekktns lerssnlyle nykkamekne leknleniki iiennqmkfk ekstllelkr
      721 kdiesielek iqkkdeeits dieeireklg avnsevetlk kkldevkkye dllknkrkyl
      781 eklnmklelt kifrekiksm gkevsknmlk eieilatenf rkitgrgeki vwsnedknky
      841 vvfldgdrge lkfeqlsgge qvavaisirg amselftesk fsifdeptnn ldterrrsla
      901 dsigeilknl eqsiivthdd tfremaqkvi el
//
LOCUS       WP_235238154             283 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235238154
VERSION     WP_235238154.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 283)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 283)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 283)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 283)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..283
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=31103
     Region          3..>274
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mgefetknpg ykikatyvpp dgglsngklv svisgknppd vvisneyasa yslaaqgale
       61 pmdeylaamd fnesdvlpsf mplmkhkdkt ylypqdsnvn llyynvamfk eagldpdnpp
      121 ktieeldaaa ekltkingnn verlgfipwi dagddaflwg wifganfidd esgavklndd
      181 hlvnmykwmn kyaqkynpen iksftsgfgg afspdhpfft gkvtmtvngn wfanalkiya
      241 pnqeyrvaai pfpaggreka ttfgtnvfmi pkggigqkei slt
//
LOCUS       WP_235237852             232 aa            linear   BCT 02-MAR-2025
DEFINITION  lipopolysaccharide core heptose(II) kinase RfaY [Fusobacterium
            varium].
ACCESSION   WP_235237852
VERSION     WP_235237852.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 232)
  AUTHORS   Yethon,J.A., Heinrichs,D.E., Monteiro,M.A., Perry,M.B. and
            Whitfield,C.
  TITLE     Involvement of waaY, waaQ, and waaP in the modification of
            Escherichia coli lipopolysaccharide and their role in the formation
            of a stable outer membrane
  JOURNAL   J Biol Chem 273 (41), 26310-26316 (1998)
   PUBMED   9756860
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017940.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06176.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..232
                     /product="lipopolysaccharide core heptose(II) kinase RfaY"
                     /calculated_mol_wt=27603
     Region          79..231
                     /region_name="Bud32"
                     /note="tRNA A-37 threonylcarbamoyl transferase component
                     Bud32 [Translation, ribosomal structure and biogenesis];
                     COG3642"
                     /db_xref="CDD:442859"
ORIGIN      
        1 mnkeksknif lyykekkdrk lyekieskey kiikilkndq rsyvalinie genliykqpi
       61 eknsrkwqrf lsifrgsesr refqniekin eaglngatpy lavekkkglf vvdsyliysy
      121 idgressfkd ieiisqelkk ihdlgflhgd shlnnflikd nkvylidtkl eknkygnfgk
      181 sfefmylees cpeeidfdkd siyfkgarml rgyltllski kiklknirrr kk
//
LOCUS       WP_235238264             184 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2577 family protein [Fusobacterium varium].
ACCESSION   WP_235238264
VERSION     WP_235238264.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022300.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10844.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..184
                     /product="DUF2577 family protein"
                     /calculated_mol_wt=20334
ORIGIN      
        1 msgnqkawdi aiaekfkerd npkpigavlg kilrplpdis iellggygil dadkiylsna
       61 itnrlaiect mkdyesqdnt fisgktnskv sidnlstsgt gstekggavl tlsqsgsiks
      121 mqiptlhnek enktkgkfil qtvfnlipgm yvlvipnyee dkffvvdvfn yapevslewe
      181 yyqk
//
LOCUS       WP_235238339             687 aa            linear   BCT 02-MAR-2025
DEFINITION  YIP1 family protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235238339
VERSION     WP_235238339.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 687)
  AUTHORS   Yang,X., Matern,H.T. and Gallwitz,D.
  TITLE     Specific binding to a novel and essential Golgi membrane protein
            (Yip1p) functionally links the transport GTPases Ypt1p and Ypt31p
  JOURNAL   EMBO J 17 (17), 4954-4963 (1998)
   PUBMED   9724632
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016764.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04893.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..687
                     /product="YIP1 family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=77888
     Region          <25..89
                     /region_name="NHL"
                     /note="NHL repeat unit of beta-propeller proteins;
                     cl18310"
                     /db_xref="CDD:302697"
     Region          58..365
                     /region_name="NHL"
                     /note="NHL repeat unit of beta-propeller proteins;
                     cd05819"
                     /db_xref="CDD:271320"
     Region          63..89
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          65..107
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          114..154
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          165..202
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          234..272
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          288..331
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          340..365
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          375..399
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <376..>428
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          404..428
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          495..658
                     /region_name="Yip1"
                     /note="Yip1 domain; pfam04893"
                     /db_xref="CDD:461468"
ORIGIN      
        1 mkikgilgvl ialllfpafp keafasaypg yiysydkeah psplpyvssr tidgkqlkvg
       61 afrspndifi dkdgalyiad tgnhriivid reteqarvid rfqnngtedh fnepqgvfvd
      121 senehifvad tlnrrivelr kdgalvnive epkstlirtn fqfapiklvm dkakrmyvvs
      181 kgsyeglmef dgdgkfvgfi gtnrvkfnpi dllwkriste eqreqmvlfv plefnnvdid
      241 ehgfmyttts evgsnepvkr lnpsgvdilr regfhppkgd iqitqtgsvt ggstfidvds
      301 eragiynald fkrgriftyd kdghllyqfg gigsqlgrfk apsaldsfed niyvsdrmlg
      361 tvtvfeptvy gkavrkavts hydgnmehaa eawnetlrln rnneiayigi gkallkqdry
      421 veamahfelg nnrsyyseaf krnrelwler nfgymagaia laaavymfvr krfrtstavn
      481 ytdagiwknp fytaihpfng fwemkyeqkg kvgiafgill glfvaivlkr qfsgfivnyn
      541 dltefnsfde lkfvilpfll wcvanwsltt lmegegsfkd iimatgyall pliivyipql
      601 vlshavtaee ssfyyllntv avlwslwllf vgtmtvhqyt pgktivtmll tivmigiilf
      661 lslllfsvlq qmfsfaisiy neiifrm
//
LOCUS       WP_235238356             100 aa            linear   BCT 02-MAR-2025
DEFINITION  HU family DNA-binding protein [Fusobacterium varium].
ACCESSION   WP_235238356
VERSION     WP_235238356.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 100)
  AUTHORS   Vis,H., Mariani,M., Vorgias,C.E., Wilson,K.S., Kaptein,R. and
            Boelens,R.
  TITLE     Solution structure of the HU protein from Bacillus
            stearothermophilus
  JOURNAL   J Mol Biol 254 (4), 692-703 (1995)
   PUBMED   7500343
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00216.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..100
                     /product="HU family DNA-binding protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0030527 - structural constituent of
                     chromatin [Evidence IEA]"
                     /calculated_mol_wt=12122
     Region          <28..91
                     /region_name="HimA"
                     /note="Bacterial nucleoid DNA-binding protein IHF-alpha
                     [Replication, recombination and repair]; COG0776"
                     /db_xref="CDD:440539"
ORIGIN      
        1 mreeefikfy kkekklkkle eareevyffw svlmevlkke kvifknwgkf evknvrerri
       61 kipnseevfy tlpkkvlsfk cgaglrerin kicekgeine
//
LOCUS       WP_235238443             170 aa            linear   BCT 02-MAR-2025
DEFINITION  2'-5' RNA ligase family protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235238443
VERSION     WP_235238443.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024952.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13563.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..170
                     /product="2'-5' RNA ligase family protein"
                     /calculated_mol_wt=19579
     Region          1..168
                     /region_name="PRK13679"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:184236"
ORIGIN      
        1 mlfgiaifpe khvqdlansw rrrhdphycl ipahmtvree eewtdeqlql avehlekits
       61 afppfsvhfn rvssfypvnn vlylalketa amqklhgdvc sgpltngtsk yvytphltig
      121 qnmsaeelhd qygnlrmqtf ditsrldrih llyqtdngsw tayqtfllrg
//
LOCUS       WP_235238447             715 aa            linear   BCT 02-MAR-2025
DEFINITION  heparinase II/III family protein [Fusobacterium varium].
ACCESSION   WP_235238447
VERSION     WP_235238447.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 715)
  AUTHORS   Dong,W., Lu,W., McKeehan,W.L., Luo,Y. and Ye,S.
  TITLE     Structural basis of heparan sulfate-specific degradation by
            heparinase III
  JOURNAL   Protein Cell 3 (12), 950-961 (2012)
   PUBMED   23011846
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028199.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16889.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..715
                     /product="heparinase II/III family protein"
                     /calculated_mol_wt=85370
     Region          <77..343
                     /region_name="AlgLyase"
                     /note="Alginate Lyase A1-III; enzymatically depolymerizes
                     alginate, a complex copolymer of beta-D-mannuronate and
                     alpha-L-guluronate, by cleaving the beta-(1,4) glycosidic
                     bond; cl00179"
                     /db_xref="CDD:444729"
     Region          434..627
                     /region_name="Hepar_II_III"
                     /note="Heparinase II/III-like protein; pfam07940"
                     /db_xref="CDD:429747"
ORIGIN      
        1 mqifekdffe nknlekiyey finkeniflk knnfsqiiky inlnckeefe akeeiakllt
       61 kniflfrgkw dmertnkpye fknkiiwnfy pendpewtfm lnrnkfwetl sisylvthek
      121 kylntwlvqq kswidqnkeh glkqykknin finekkfykr vikniknile nkigkkadtw
      181 rtidialrce twirvleifk nekiekklff eimslikiqg dyllknyeet frpisnwgti
      241 qnyvlyliga yfpelkdsrl fkeiglerlk qnlelqicdd gmhieqafly hnevlhsclg
      301 vinimqklki etpkwlvekt ramlyanlnl mkpnghqpll gdsddtnird iltkgavlln
      361 deklkkyglk kidlecllfl gddcikkyee lkenelgyts vvmknsgnsv lrsgwnkedn
      421 ylffhngffg gghshsqalh felygeeeef ivdsgrytyv dskirrslks vfyhntvvvd
      481 kkdcrkpiss wsfkntpell ntyynfdkei eyienshlgy fnlikpvili rkilflkpdi
      541 ylmidegisr gthlyqqyfn fntqgkiekd nnriiyqgkn smlefyalsn veikiensil
      601 skeynkiekn kkiitslksk gntsiislfy lkklrnnfni kikklpiyqq nnkkvsesea
      661 egiliekndi kykifinhhe niknkfykmd gnfifgkviv ikeimkekki iklkm
//
LOCUS       WP_235238548             452 aa            linear   BCT 02-MAR-2025
DEFINITION  putative phage tail protein [Fusobacterium varium].
ACCESSION   WP_235238548
VERSION     WP_235238548.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 452)
  AUTHORS   Morgan,G.J., Hatfull,G.F., Casjens,S. and Hendrix,R.W.
  TITLE     Bacteriophage Mu genome sequence: analysis and comparison with
            Mu-like prophages in Haemophilus, Neisseria and Deinococcus
  JOURNAL   J Mol Biol 317 (3), 337-359 (2002)
   PUBMED   11922669
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021583.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10076.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..452
                     /product="putative phage tail protein"
                     /calculated_mol_wt=51008
     Region          <30..148
                     /region_name="Phage_Mu_Gp48"
                     /note="Bacteriophage Mu-like, Gp48; cl01542"
                     /db_xref="CDD:470245"
ORIGIN      
        1 mdikmigkva rnklmedfsq alqkanlvte aeisqyrkea fvveadeeti dkwekfmele
       61 ykpdytlqdr idrvlytlqa rgsftkeflk nqgrlflnge levdelfsqy nfiirftsiv
      121 gvpenienfk dmvdlnkpah ltyefkfryn thgqleilth gemeaythde lyrkrvfdds
      181 qlpttqnflm kavntvknav esliyplktd yynvdifndn fryldehkle kgayvgnadd
      241 lndeiskvas ptqlgrvkig nnlkidengf lsgqdvdlsn yydkpeieek fknfcpvpve
      301 wlayvdteeh patrflgttw ikledvfirg tssnsvsgqt ggsntktiak enlpniklqv
      361 dafslgrgtq eitgafdgvn nqygyangaf ykggssagag sgggdtgvqf qaskswtgms
      421 tsaspytstl gsgtpldiip ayytvhiwkr ls
//
LOCUS       WP_235238597             236 aa            linear   BCT 02-MAR-2025
DEFINITION  protein kinase domain-containing protein [Fusobacterium varium].
ACCESSION   WP_235238597
VERSION     WP_235238597.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 236)
  AUTHORS   Hunter,T. and Plowman,G.D.
  TITLE     The protein kinases of budding yeast: six score and more
  JOURNAL   Trends Biochem Sci 22 (1), 18-22 (1997)
   PUBMED   9020587
REFERENCE   2  (residues 1 to 236)
  AUTHORS   Hanks,S.K. and Hunter,T.
  TITLE     Protein kinases 6. The eukaryotic protein kinase superfamily:
            kinase (catalytic) domain structure and classification
  JOURNAL   FASEB J 9 (8), 576-596 (1995)
   PUBMED   7768349
REFERENCE   3  (residues 1 to 236)
  AUTHORS   Hanks,S.K. and Quinn,A.M.
  TITLE     Protein kinase catalytic domain sequence database: identification
            of conserved features of primary structure and classification of
            family members
  JOURNAL   Methods Enzymol 200, 38-62 (1991)
   PUBMED   1956325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00069.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..236
                     /product="protein kinase domain-containing protein"
                     /GO_function="GO:0004672 - protein kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006468 - protein phosphorylation
                     [Evidence IEA]"
                     /calculated_mol_wt=27258
     Region          18..>193
                     /region_name="SPS1"
                     /note="Serine/threonine protein kinase [Signal
                     transduction mechanisms]; COG0515"
                     /db_xref="CDD:440281"
ORIGIN      
        1 merkqldsil lrngeqfity litdeageks ilklinpeyl eyqdkyqkik eqfqlekqvl
       61 nllnieeipk yidsgdnflh lsyikgqnlq kyveskkisv eeieklicsv setagklhrl
      121 givhcdikps niiydgekty iidfgsvsfr geesiyiqgs kgfsspeiyi hgakrtvqdd
      181 iysitalycw llssqnynsy ieenneifki gladkkedrf kstkeltgai ktirre
//
LOCUS       WP_235238627             183 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease subunit S [Fusobacterium varium].
ACCESSION   WP_235238627
VERSION     WP_235238627.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 183)
  AUTHORS   Janscak,P. and Bickle,T.A.
  TITLE     The DNA recognition subunit of the type IB restriction-modification
            enzyme EcoAI tolerates circular permutions of its polypeptide chain
  JOURNAL   J Mol Biol 284 (4), 937-948 (1998)
   PUBMED   9837717
REFERENCE   2  (residues 1 to 183)
  AUTHORS   Bickle,T.A. and Kruger,D.H.
  TITLE     Biology of DNA restriction
  JOURNAL   Microbiol Rev 57 (2), 434-450 (1993)
   PUBMED   8336674
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01420.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..183
                     /product="restriction endonuclease subunit S"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=21192
     Region          31..>182
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
ORIGIN      
        1 maknkeltfe eklkealipk eeqpyeisen wewvklgsvs dykkgpfgss ltkslfipkn
       61 kntikvyeqk naiqknwklg syyiseeyfk nnmssfevke ndiivscagt igetyimphg
      121 iekgiinqal mkiklnenid kkyylfyfdy tlknlsntys kgsaiknipp fkifkelafi
      181 lph
//
LOCUS       WP_235238651             636 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Fusobacterium varium].
ACCESSION   WP_235238651
VERSION     WP_235238651.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 636)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 636)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 636)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..636
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=68984
     Region          7..379
                     /region_name="SCAD_SBCAD"
                     /note="Short chain acyl-CoA dehydrogenases and eukaryotic
                     short/branched chain acyl-CoA dehydrogenases; cd01158"
                     /db_xref="CDD:173847"
     Site            order(123,126,132,156,158,336,340,363)
                     /site_type="other"
                     /note="FAD binding site [chemical binding]"
                     /db_xref="CDD:173847"
     Site            order(128,133,156,199..203,268,271,280,284..285,287,290,
                     298,321,332,336,341,343,345..346,350,353..354,357..358,
                     360,367,370,373)
                     /site_type="other"
                     /note="homotetramer interface [polypeptide binding]"
                     /db_xref="CDD:173847"
     Site            order(132..133,236,239..240,243,271,363)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:173847"
     Site            363
                     /site_type="active"
                     /note="catalytic base [active]"
                     /db_xref="CDD:173847"
     Region          <407..558
                     /region_name="FixB"
                     /note="Electron transfer flavoprotein, alpha subunit FixB
                     [Energy production and conversion]; COG2025"
                     /db_xref="CDD:441628"
     Region          586..636
                     /region_name="NorV"
                     /note="Flavorubredoxin [Inorganic ion transport and
                     metabolism]; COG1773"
                     /db_xref="CDD:441379"
ORIGIN      
        1 mffkttedhe nlrmkirefa etevkpiafm ldkenefpte avkklgemgi lgtpfpkeyg
       61 gagldmlsya iaveelsrvd ggtgvilsah vslgsypifa ygteeqkqky lvplakgekl
      121 gafgltepna gsdaggtett avlegdyyil nggkifitna dkaetyivfa vttpdigtrg
      181 isafivekgw egfmfgdhyd kmgirsssta elifnnvkvp kenllgkege gfkiamstld
      241 ggrigiasqa lgiaqgafen aleyakereq fgkpiafqqv isfkladmat klraarflvy
      301 saaelkenhe nyamesamak qyasdvclei vnealqifgg tgylkgmeve rayrdakict
      361 iyegtneiqr vviashligk mpksdggskk psskghatgi rkniilkegs akervealve
      421 alkadgydft vgididtpis kadrvvsagk gigpkenmel ikklaiqaga aigssrpvae
      481 tlrylplnry vgmsgqkfng nlyiacgisg agqhlkgikd attivainnn pnaqifknad
      541 ygiigtveei lplltaaldn gepkkeappm kkmkriipkk eiptwkrhvc ngcgyeydpa
      601 igdeendiks gtlfealpee wicpicgesk dmfiev
//
LOCUS       WP_235238755             363 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Fusobacterium varium].
ACCESSION   WP_235238755
VERSION     WP_235238755.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..363
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=41162
     Region          2..356
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mkilhiitsl elggaekllt ellpaqiesg htielmilsd inavfkkdle ekevkiytak
       61 ynskksplni leinkriktg nydivhvhlv haqywtrmar lldgnknrky lttehstsnr
      121 rrnnkvlgvi dkfifngyde ivsisnatek slyswiggek ekyavipngi dldifkglls
      181 iardeleled kdiilmmvsr fhqsknhkgv iealeylpek ykivfvgdgt leedvknyak
      241 ekklesrvkf lgkrrdipnl lktadiiiqf sffegfgita vegmasgkpv iasdvpglae
      301 vvlgggivcp ndsqklaeav lrledkeiyn ytvemclkks keysieksae kyiklygeil
      361 erk
//
LOCUS       WP_235238260             184 aa            linear   BCT 02-MAR-2025
DEFINITION  general stress protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235238260
VERSION     WP_235238260.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 184)
  AUTHORS   Periago,P.M., van Schaik,W., Abee,T. and Wouters,J.A.
  TITLE     Identification of proteins involved in the heat stress response of
            Bacillus cereus ATCC 14579
  JOURNAL   Appl Environ Microbiol 68 (7), 3486-3495 (2002)
   PUBMED   12089032
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022629.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11181.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..184
                     /product="general stress protein"
                     /calculated_mol_wt=19027
     Region          3..>72
                     /region_name="YflT"
                     /note="Heat induced stress protein YflT domain; cl46343"
                     /db_xref="CDD:480683"
ORIGIN      
        1 markigifet eqqaitairq leqagfvpge lqvlakdseh srrieaesgv hadelrelae
       61 ssdadrgigv fgmeaagygg mavapaygms gsgmpsyfgg aypfaaaalg ndyghadalq
      121 slgldqeeae icskslqgga vivivqtdes kslldkedgp dlsrlsaaea vfrqcnasvi
      181 taga
//
LOCUS       WP_235238325             569 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6138 family protein [Fusobacterium varium].
ACCESSION   WP_235238325
VERSION     WP_235238325.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 569)
  AUTHORS   Yang,X. and Yousef,A.E.
  TITLE     Antimicrobial peptides produced by Brevibacillus spp.: structure,
            classification and bioactivity: a mini review
  JOURNAL   World J Microbiol Biotechnol 34 (4), 57 (2018)
   PUBMED   29594558
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040333.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19635.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..569
                     /product="DUF6138 family protein"
                     /calculated_mol_wt=65450
     Region          1..563
                     /region_name="DUF6138"
                     /note="Family of unknown function (DUF6138); pfam19635"
                     /db_xref="CDD:437467"
ORIGIN      
        1 menkvkavtd kmieifefye keireaiekk etlpkdkfmp gwakgihfsw yhhkaqpeyd
       61 vkesneiscf fefngihvsy nrmekqtdvd lkfltseifk neivptiqkw lqnkvdnepy
      121 gglynasfgi tmtlsvsrdp lptdaphmqg qvweqtrita kdekrlskrk emiynfikne
      181 eyktydisei dnslvpicsi avqdffeefg knylteffti liaqakksrf sgtmsdliyg
      241 fangaailtq vdenhtpnne elalacwlsm milihgtdky ekqhgrdylk kaselgykea
      301 knilkfgtgq ipadivqykd kyvtclgndi dkiidlkike eceeaykami efiirlikag
      361 fpneysikfn skikeflpip dlkktkanif wnncakypvl yplmkeyvlt imdpydyysd
      421 adseeavpvg gyavfalgla disngdivqk fmeqndsehs itpswfvgey idkfgitsen
      481 ipvviaclin snnhgykgsn fdglnnpdil rkfveelens eissysiyei iesiwgsedv
      541 leeaitmaee anqpylqkil tlsegdeee
//
LOCUS       WP_235238772             838 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2339 domain-containing protein [Fusobacterium varium].
ACCESSION   WP_235238772
VERSION     WP_235238772.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021606.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10101.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..838
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..838
                     /product="DUF2339 domain-containing protein"
                     /calculated_mol_wt=97018
     Region          <4..>217
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     Region          209..>550
                     /region_name="COG5373"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:444140"
ORIGIN      
        1 midkkkelef leekykeikk lnseaesiis gikndvdinr etqlleekek lekilreikd
       61 elqiktkeie dlknsnvill eelkeskrlr rekeinkfqe aaakkvkidl edriisrlss
      121 frkelykkin iqdkelmkdm seeshelrne lkavaekidi fvenskrkal eagialnees
      181 svfhseiqke ydlkedkylf ekekknfvle kliglkgfnf lgiisiflgi flvfktqfrd
      241 ffnndyikss gsyllgiifl fageklyqkn kkhfavglig ggigvlyitt llstmylglf
      301 smmlglfisv iltglvvila lryssqiigi laliggylpy gayiysegge tkiyylivys
      361 lilqgivlgi awkkdwlysk iigfvigsin magivfylsn ymnnkiiaff yivifttays
      421 fiflnshrke nresniidyi llslnlivkf sliyslsdgt tpnwikaglv agvgivygff
      481 gdklkenrvs kifyvialgc fiviipvils keyivvawgl eavflyfmas kyknkeieyg
      541 avfiylitll tnifireeky ylvyiqdili islsfvvyfv vkeknynkti rslmtpfkyl
      601 iflysiffin niifinvkki pgryytkemf gilisiltvn illriitykv kelqdkfslv
      661 fltiieilsv liiniintfa yvryesgker vlliglilaa niylfffgrk dihftffktn
      721 ekkvpwiige slyiiivsym imnnvfyidg anliiniigl lmcgylvwkg fktpnrsirr
      781 vglgigiffv lksffidfis fsstykllay fsmgviligt syiyqtalkk lekeekge
//
LOCUS       WP_235238777             332 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235238777
VERSION     WP_235238777.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13407.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..332
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=36483
     Region          50..318
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 msyrkwnigi ailfflfafl ltsfllstlr vrdllqplls estpagaayh vmliaqevdn
       61 pywrsierga qnasaaygmh ldyvgpfrin pneqikllek aiaskvdavv lqgindpryr
      121 aiidqavskg ipiitidtde pgskrlsyvg tdnfaagirm gelvaqsaad qasiavlign
      181 eqapnqqlrl eglraviers prltivdvrs snisrlqaag eaedmltkqp nidfmiglsa
      241 ldgvgiaetv nrvrsrkvqi fafddleetl nhvrkgviea tiiqqpyqmg ytaisqlndf
      301 fhgktppkqh fttatvvdqs slnkagngen dr
//
LOCUS       WP_235238778             251 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme [Fusobacterium varium].
ACCESSION   WP_235238778
VERSION     WP_235238778.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 251)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..251
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /calculated_mol_wt=26997
     Region          5..249
                     /region_name="PorB"
                     /note="Pyruvate:ferredoxin oxidoreductase or related
                     2-oxoacid:ferredoxin oxidoreductase, beta subunit [Energy
                     production and conversion]; COG1013"
                     /db_xref="CDD:440637"
ORIGIN      
        1 mgeiifkrtn gltekethyc pgcthgiahr lvaevleemn eldssvcvss vgcsvlsyey
       61 fnidaveaah grapavatgi krsisdkntl vftyqgdgdl asiglgetms aavrgeniti
      121 ifmnnaiygm tggqmapttl kgqktttspy grdpktaglp ikmcevlaqi psatyiervt
      181 lttpaniika kkaisnafkc qkegkgfsli eivgtcnvgw glspkdaiew cknemlpyfp
      241 lgiykdvrge r
//
LOCUS       WP_235238803             369 aa            linear   BCT 02-MAR-2025
DEFINITION  alanine racemase [Fusobacterium varium].
ACCESSION   WP_235238803
VERSION     WP_235238803.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 369)
  AUTHORS   Shaw,J.P., Petsko,G.A. and Ringe,D.
  TITLE     Determination of the structure of alanine racemase from Bacillus
            stearothermophilus at 1.9-A resolution
  JOURNAL   Biochemistry 36 (6), 1329-1342 (1997)
   PUBMED   9063881
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013345.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01168.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..369
                     /product="alanine racemase"
                     /EC_number="5.1.1.1"
                     /calculated_mol_wt=40475
     Region          22..360
                     /region_name="Dsd1"
                     /note="D-serine deaminase, pyridoxal phosphate-dependent
                     [Amino acid transport and metabolism]; COG3616"
                     /db_xref="CDD:442834"
ORIGIN      
        1 mkkenlktpa illnlnalen niktyqkmcn dngkelwpmi kthksmellk mqieagatga
       61 lcgtldeaea cckiglkkim yaypvaskes iervieltkk sdfiirldnl eaakmindma
      121 vatdtvinyt iivdsglhrf glsvnkivef adklktmkgl klrgisthpg hvysatcene
      181 ihkyvideck tldtakkymn dagyeleyit sgstptfsea vkdkninvlh pgnyvfldsi
      241 qlsikkaein dcaltvyati ishpkedlfi cdagakclgl dqgahgnnsi vgfgtvighp
      301 evivaslsee vgklhihget nlkvgdkiei ipnhscstan lcsyytvmkd gnvvksipvd
      361 vrgnsfkqi
//
LOCUS       WP_235238827             268 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Fusobacterium varium].
ACCESSION   WP_235238827
VERSION     WP_235238827.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..268
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=32240
     Region          7..90
                     /region_name="SoxR"
                     /note="DNA-binding transcriptional regulator, MerR family
                     [Transcription]; COG0789"
                     /db_xref="CDD:440552"
     Region          123..267
                     /region_name="GyrI-like"
                     /note="GyrI-like small molecule binding domain; cl41982"
                     /db_xref="CDD:455327"
     Region          <201..262
                     /region_name="BltR2"
                     /note="GyrI-like small molecule binding domain [Signal
                     transduction mechanisms]; COG4978"
                     /db_xref="CDD:444003"
ORIGIN      
        1 mkklykigei sklynissdi lrhyekigli ipdvrdengy ryysqkqiwk lnnirnlrnl
       61 gvglkeitef medrnliktk evidfqliki eeklkklsel kkelkdkkkn ieyfekfeey
      121 ekpvlkeidk ryilykkgnf heeweidfel kklkkklpdd ndfiftesev gttilkenwe
      181 nnkyldysst fvittdkaen tiekglyltf vfkgsyekvr ehytflkeyi ktnnltvvgd
      241 iieiyhieih itdnvneyvt eiqipvkk
//
LOCUS       WP_235238839             197 aa            linear   BCT 02-MAR-2025
DEFINITION  pimeloyl-ACP methyl esterase BioG family protein [Fusobacterium
            varium].
ACCESSION   WP_235238839
VERSION     WP_235238839.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 197)
  AUTHORS   Shi,J., Cao,X., Chen,Y., Cronan,J.E. and Guo,Z.
  TITLE     An Atypical alpha/beta-Hydrolase Fold Revealed in the Crystal
            Structure of Pimeloyl-Acyl Carrier Protein Methyl Esterase BioG
            from Haemophilus influenzae
  JOURNAL   Biochemistry 55 (48), 6705-6717 (2016)
   PUBMED   27933801
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016209.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04301.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..197
                     /product="pimeloyl-ACP methyl esterase BioG family
                     protein"
                     /calculated_mol_wt=22725
     Region          2..195
                     /region_name="DUF452"
                     /note="Protein of unknown function (DUF452); cl01062"
                     /db_xref="CDD:470052"
ORIGIN      
        1 mklilffngw gmdenivshl eipigytlki infpynfdkt iltqyddiif igwsfgsyyl
       61 akyllennir skkiislngt petigkngis egvfnltldt ltsdtlqkfy enmgidntfs
      121 pskknfkdik delryfknny iplkniftha figkkdkiip alrqkkyfes nnvnitellc
      181 ghypfsviks wstlige
//
LOCUS       WP_235238841             222 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase domain-containing protein [Fusobacterium varium].
ACCESSION   WP_235238841
VERSION     WP_235238841.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019846.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08241.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..222
                     /product="methyltransferase domain-containing protein"
                     /GO_function="GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /calculated_mol_wt=25437
     Region          3..222
                     /region_name="BioC"
                     /note="malonyl-acyl carrier protein O-methyltransferase
                     BioC; TIGR02072"
                     /db_xref="CDD:273953"
ORIGIN      
        1 mtfdknftty dnnaivqkkv atnlseyikn dislsgnmnk iielgcgtgi ftkeflsnft
       61 pkhltlndff dvreylknln ynefiqgdie iitlpkadii isssafqwvs sfeklinnis
      121 astnnlafsi ytkgnlkeiy ehfnislnyl eneeihqilr kkfknitskk etiilefntp
      181 lealrhlknt gvtgfqktsi skirsfasct ltyeisyfic kn
//
LOCUS       WP_235238860             185 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235238860
VERSION     WP_235238860.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..185
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=20302
     Region          4..33
                     /region_name="Nudix_N_2"
                     /note="Nudix N-terminal; pfam14803"
                     /db_xref="CDD:464323"
     Region          38..156
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 meakfcmacg deletrdvdg tmrraciscs fvhwgsysig vgalvikdgk illvrraqep
       61 grgywtnpgg yieqlepiea tierevleec gveaavksvv alrdqprsih niyiafemey
      121 vsgepipdnv evdaagffsl qeletmnvag ftrwladvaf hgrtqgltvd papvvplngy
      181 glyrv
//
LOCUS       WP_235238758             262 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Fusobacterium varium].
ACCESSION   WP_235238758
VERSION     WP_235238758.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 262)
  AUTHORS   Wiggins,C.A. and Munro,S.
  TITLE     Activity of the yeast MNN1 alpha-1,3-mannosyltransferase requires a
            motif conserved in many other families of glycosyltransferases
  JOURNAL   Proc Natl Acad Sci U S A 95 (14), 7945-7950 (1998)
   PUBMED   9653120
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016377.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04488.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..262
                     /product="glycosyltransferase"
                     /calculated_mol_wt=31406
     Region          1..132
                     /region_name="OCH1"
                     /note="Mannosyltransferase OCH1 or related enzyme [Cell
                     wall/membrane/envelope biogenesis]; COG3774"
                     /db_xref="CDD:442988"
     Region          124..214
                     /region_name="Gb3_synth"
                     /note="Alpha 1,4-glycosyltransferase conserved region;
                     pfam04572"
                     /db_xref="CDD:428017"
ORIGIN      
        1 mipkklhyiw lgnnsrpnlm dicinswrek lpdyeiiewn esnldfenei nsniflkecl
       61 drklwaflsd yfrmkvlyen ggiyldtdmq iiksldeflk deffiglese dvisagiiga
      121 vphnevvkdi mdfykediwn epiytipaii trvlkkkysf elkneiinik dgavkiypsn
      181 yfypyhftee fqyskltekt ygihwwgksw gkkkdlkkly flefkhfrgi kkilvniliy
      241 tgllkfikew kilkianrki nf
//
LOCUS       WP_235238904             419 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235238904
VERSION     WP_235238904.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..419
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=46463
     Region          42..414
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mhagkrwmiv livlmitgcg qqsiiseegt verlrhgqnv ditfwhtysd eetriledli
       61 ipsfekdnpl ihvvpirqan naelkytlis kasanrapdv vrmdiawvpe fsqsglllpl
      121 sdysdfgdvt kllqsntgsa gyyeghhysl pvnmntkaai fskallekag ldvppstfee
      181 vielarehrf kigmggmesw sslpyvyalg grmtndtysa atgylngaat ikaveelvsl
      241 yndklidrtv ikggadnweg vktgnilmtd egpwfysvfq ggeleravrs tiavpfpaay
      301 gpssvlgged lvilrgsenp iqawefmkwm irkdtqvams qtgliptnle akemkanres
      361 fihpyavald qtflrppvka wsrideiyav ymakifqgel svedgltqaa gkidqlliq
//
LOCUS       WP_235238903             945 aa            linear   BCT 02-MAR-2025
DEFINITION  SNF2-related protein [Fusobacterium varium].
ACCESSION   WP_235238903
VERSION     WP_235238903.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 945)
  AUTHORS   Rowbotham,S.P., Barki,L., Neves-Costa,A., Santos,F., Dean,W.,
            Hawkes,N., Choudhary,P., Will,W.R., Webster,J., Oxley,D.,
            Green,C.M., Varga-Weisz,P. and Mermoud,J.E.
  TITLE     Maintenance of silent chromatin through replication requires
            SWI/SNF-like chromatin remodeler SMARCAD1
  JOURNAL   Mol Cell 42 (3), 285-296 (2011)
   PUBMED   21549307
REFERENCE   2  (residues 1 to 945)
  AUTHORS   Linder,B., Cabot,R.A., Schwickert,T. and Rupp,R.A.
  TITLE     The SNF2 domain protein family in higher vertebrates displays
            dynamic expression patterns in Xenopus laevis embryos
  JOURNAL   Gene 326, 59-66 (2004)
   PUBMED   14729263
REFERENCE   3  (residues 1 to 945)
  AUTHORS   Eisen,J.A., Sweder,K.S. and Hanawalt,P.C.
  TITLE     Evolution of the SNF2 family of proteins: subfamilies with distinct
            sequences and functions
  JOURNAL   Nucleic Acids Res 23 (14), 2715-2723 (1995)
   PUBMED   7651832
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012403.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00176.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..945
                     /product="SNF2-related protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0140658 - ATP-dependent chromatin
                     remodeler activity [Evidence IEA]"
                     /calculated_mol_wt=108929
     Region          7..934
                     /region_name="DISARM_DrmD_b"
                     /note="DISARM system SNF2-like helicase DrmD, short form;
                     NF038318"
                     /db_xref="CDD:468472"
ORIGIN      
        1 mvnytphqsr yfaeqiqlkr pqssfesias amssvkvdln phqvdaamfa vksplsngai
       61 ladevglgkt ieaglvlsqy waerkrkiil ivpaslrmqw rqeledkfyi dsilmeskef
      121 nrlrkngsin pfevsnkvvi csydfasrra aelkainwdl vimdeahrlr nvyktsnvts
      181 nrlksalsgk mkllltatpl qnnlmelygl vsiiddhvfg daktfremyv avnnmeirnr
      241 nlrkrlhsfc qrtlrsqvte yvrytnripi lqeytpsaee eklynfisdy lqtdklyalp
      301 egqrtlitmv lrkllasssf aitgtlnsli erlnnlllgv eseldiedyd tidelkesfe
      361 deenitaell rdregimqel aqleeyarla qsitenskge nllialhkgf deteklggqr
      421 kaviftesrr tqdylynlls nngyagqivf lngsnsdads krilnewker hkddgrvsgs
      481 rtadikaavv eefrdkasil igteaaaegi nlqfcsllvn ydlpwnpqri eqrigrchry
      541 gqkndvvvin flnrknaadv rvyqlldqkf rlfsgvfgss devlgsiesg vdfekriagi
      601 yqkcktsdei tqefdelqee maeainekmt qarqtilenf dedvaaklkd cqtsivasmd
      661 kytrwlyyff lmhgakrvep ldqlrfrvdn dgkfktynld wksaetsgdi flrkddklys
      721 nwlaevneve lnpvtiefdy ssnkkrhiaf fdshiglkgm lsidkvsyeg igeeehlift
      781 vrcddgtvld eelinsmmel cgtvvgdcpv etdsftrlre eliayqqqqv eennkkyyle
      841 ecdkldayse dlkeglkrel kdlkkaitek nkefrastnl plsemleikd elekmkkkrr
      901 amerdinkre dgidemnerl qdeireklkg nskithitti gfkik
//
LOCUS       WP_235238931             353 aa            linear   BCT 02-MAR-2025
DEFINITION  PD-(D/E)XK nuclease family protein [Fusobacterium varium].
ACCESSION   WP_235238931
VERSION     WP_235238931.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025639.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14281.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..353
                     /product="PD-(D/E)XK nuclease family protein"
                     /calculated_mol_wt=41983
     Region          3..>101
                     /region_name="PDDEXK_4"
                     /note="PD-(D/E)XK nuclease superfamily; pfam14281"
                     /db_xref="CDD:433835"
ORIGIN      
        1 mrpnifkfat selsqdafic yvleyhkdif kekhlfenkf akffvgkilk kigledfkin
       61 tlevkkqfma idilviinns iyviiedkif tserknqmne yrekvinfyk theskvyciy
      121 yktgdesyen itliqkeknt vtilrneiin ifdkydgvni ifqdylsnlk diqaereffk
      181 skdlressft wqevigfyne ldktfvtlke kglmpkdikf nweevsnpkg gficyffsnv
      241 ldfeeygyyl qlestsiqek niqenlklvv kvwsdkkdis llyrgldilk enygeaiikp
      301 vrfshgswmt qaiikdylvf neigniniye taknivryik slrllkeklr nls
//
LOCUS       WP_235238932             533 aa            linear   BCT 02-MAR-2025
DEFINITION  GMC oxidoreductase [Paenibacillus alkaliterrae].
ACCESSION   WP_235238932
VERSION     WP_235238932.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05199.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..533
                     /product="GMC oxidoreductase"
                     /GO_function="GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /calculated_mol_wt=58496
     Region          2..47
                     /region_name="LysM"
                     /note="Lysin Motif is a small domain involved in binding
                     peptidoglycan; cd00118"
                     /db_xref="CDD:212030"
     Region          105..533
                     /region_name="BetA"
                     /note="Choline dehydrogenase or related flavoprotein
                     [Lipid transport and metabolism, General function
                     prediction only]; COG2303"
                     /db_xref="CDD:441878"
ORIGIN      
        1 mriyiakyge tlrniaqrqn valeelvpln pqvaspdanl sgrqiklppp sasagnritd
       61 fknewipltp ltrmaqtdyd vlivgsgagg gavlwrlcqq wgingkkigv veagdlllpt
      121 hfyniptmsh pragryfekv stpvdqtmfr elyafggrtl lwgllaprmp afetadwplp
      181 anelqfyysi aeramnvtpf yqkgsyftsi lldrlhnygf idaipfpvav dqeatkygqi
      241 hsnaafssia lfaealnrrp fdlavnsrav eiitenkrva girvmsadkk shvlkaktvv
      301 laastfqtpr lllasgitgr aighyltths llgiagyldr kqfpevlgnl giviparedr
      361 pfqlgidgpp qgynayqqyq ieplqeqlri vpgafgaves qfenrvelds avrdefgvpv
      421 ihvhfsyskk deevirqmke gtlqllsavq ahpgeggtfe vgpaveaihd sgtcrmgndp
      481 dtsatdrygq ihgisglyva dnsvipssgt anptlttval airtadylir qlk
//
LOCUS       WP_235238937             263 aa            linear   BCT 02-MAR-2025
DEFINITION  sporulation protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235238937
VERSION     WP_235238937.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 263)
  AUTHORS   Han,W.D., Kawamoto,S., Hosoya,Y., Fujita,M., Sadaie,Y., Suzuki,K.,
            Ohashi,Y., Kawamura,F. and Ochi,K.
  TITLE     A novel sporulation-control gene (spo0M) of Bacillus subtilis with
            a sigmaH-regulated promoter
  JOURNAL   Gene 217 (1-2), 31-40 (1998)
   PUBMED   9795118
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07070.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..263
                     /product="sporulation protein"
                     /calculated_mol_wt=29743
     Region          4..258
                     /region_name="Spo0M"
                     /note="SpoOM protein; cl22933"
                     /db_xref="CDD:473996"
ORIGIN      
        1 mfifkkvlsr igiggvkvdl elassevtag eavegivriq ggsveqllha ceinlyaeyt
       61 syetnpqgeq rtrsvktviq sytleldfvl qpyenrelpc slliplhtpp rltrekvwlq
      121 taislekavd psdkdvievl pdpllrrfln tmerlgffmv ksrltengvt dsspdpyvhr
      181 ivyrvpdeyr eelhevtatp iwmtdalhia lqitrkqgll dsiagkdlvk gkielipeqw
      241 qtkcddelaa qledviercl qqa
//
LOCUS       WP_235238955             217 aa            linear   BCT 02-MAR-2025
DEFINITION  outer membrane beta-barrel protein [Fusobacterium varium].
ACCESSION   WP_235238955
VERSION     WP_235238955.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024895.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13505.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..217
                     /product="outer membrane beta-barrel protein"
                     /calculated_mol_wt=24447
     Region          7..215
                     /region_name="OMP_b-brl"
                     /note="Outer membrane protein beta-barrel domain;
                     pfam13505"
                     /db_xref="CDD:463903"
ORIGIN      
        1 mfkkvllgla alscvslaae gtnvylkaga dmlqrfdevk ydgeklnkdd gddfgyeltv
       61 evmrevypnf elglglsyqd hgdpksvtyy gdfewgnsdk yevpgfksvp lyvtakysfp
      121 vegnikpylk adlgysfnde ngdlkniyss yvdkystkve nglyygigag aeynnfvvdl
      181 mykvnraeik vntdgervkk dldysritls vgyrfnf
//
LOCUS       WP_235238960             268 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Fusobacterium varium].
ACCESSION   WP_235238960
VERSION     WP_235238960.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 268)
  AUTHORS   Yeo,C.C. and Poh,C.L.
  TITLE     Characterization of IS1474, an insertion sequence of the IS21
            family isolated from Pseudomonas alcaligenes NCIB 9867
  JOURNAL   FEMS Microbiol Lett 149 (2), 257-263 (1997)
   PUBMED   9141667
REFERENCE   2  (residues 1 to 268)
  AUTHORS   Solinas,F., Marconi,A.M., Ruzzi,M. and Zennaro,E.
  TITLE     Characterization and sequence of a novel insertion sequence,
            IS1162, from Pseudomonas fluorescens
  JOURNAL   Gene 155 (1), 77-82 (1995)
   PUBMED   7698671
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01695.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..268
                     /product="ATP-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=31156
     Region          8..256
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            114..121
                     /site_type="other"
                     /note="Walker A motif"
                     /db_xref="CDD:99707"
     Site            order(115..122,174,213)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:99707"
     Site            170..175
                     /site_type="other"
                     /note="Walker B motif"
                     /db_xref="CDD:99707"
     Site            222
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:99707"
ORIGIN      
        1 mkkcefcged yvknenkyfa alpkgikkel eyiprcdcle knraeelekl ekkrvqecmk
       61 nklkkcldis vmdkkfinsr fenadmsssh mqlakryaen flkkdkkegl lfyggvgtgk
      121 tfasaciany lmeqgetviv inlglylnkl tiewgegeki ileqtekcdl miiddfgaek
      181 eldknqtgwr aekiynlidg ryrsekpliv stnlnfsedr nrceitekfs tqgqnrirdr
      241 iidmcfpvri agksrrgmtq erfsefme
//
LOCUS       WP_235239006             132 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1492 domain-containing protein, partial [Fusobacterium varium].
ACCESSION   WP_235239006
VERSION     WP_235239006.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019021.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07374.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         <1..132
                     /product="DUF1492 domain-containing protein"
ORIGIN      
        1 klkreiehdk kileelksnl dglqalqnse kvqggpvkdd tsivnrmnkv ielenkiknk
       61 lcklndfqqk llselerien idekilmesr yilnlkweni adkisyskrh mhrihkkale
      121 nfkmslnvti di
//
LOCUS       WP_235239023             191 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein [Escherichia coli].
ACCESSION   WP_235239023
VERSION     WP_235239023.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06763.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..191
                     /product="phage tail protein"
                     /calculated_mol_wt=21755
     Region          3..191
                     /region_name="Minor_tail_Z"
                     /note="Prophage minor tail protein Z (GPZ); pfam06763"
                     /db_xref="CDD:284235"
ORIGIN      
        1 maikgldqai dnlsrvrkna ipaasamtin rvattainqs ssqvaretrv rrklvkarsr
       61 lkratvrnpn ariivnrgdl pviklgirml grrpnsilka gqhryqrafi qrlnngrwhv
      121 mqrlpqarye egnddkgrkk rnrlpiqvvk ipmaaplkqa fdenvdrirr erlpgelasa
      181 lkqqlriaik r
//
LOCUS       WP_235239034             617 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6645 domain-containing protein [Escherichia coli].
ACCESSION   WP_235239034
VERSION     WP_235239034.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042725.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20350.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..617
                     /product="DUF6645 domain-containing protein"
                     /calculated_mol_wt=65847
     Region          6..50
                     /region_name="DUF1737"
                     /note="Domain of unknown function (DUF1737); cl10503"
                     /db_xref="CDD:471980"
     Region          66..>261
                     /region_name="SASA"
                     /note="Carbohydrate esterase, sialic acid-specific
                     acetylesterase; pfam03629"
                     /db_xref="CDD:427409"
     Region          467..575
                     /region_name="DUF6645"
                     /note="Family of unknown function (DUF6645); pfam20350"
                     /db_xref="CDD:466500"
ORIGIN      
        1 mafkyydvvr aaspsdlaek lthklkegwq pfgspvaitp ytlmqaiaae gdvvvsgate
       61 pdwfyvvvla gqsngmayge glplpdsyda pdprikqlar rstvtpgges ctyndiipad
      121 hclhdvqdms tlnhpkadls kgqygcvgqg lhiakkllpy ipnnagillv pccrggsaft
      181 qgaegtfsad tgasqdsarw gvgkplyqdl iartkaalqk npknvllavc wmqgefdmsa
      241 atyaqqpdlf tamlkqfrtd lsgfnaqchg gsaavvpwic gdttyywknt ygtqydsvyg
      301 ayknresdnv ffvpfmtdgn gnntptnlpa edpdiadagy ygaqsrsngn wvssnrpthf
      361 sswarrsiip drmatailna agrtsafisg kapeikpspg gntpsgpsed asvrtisllp
      421 tageaaaqgw tikdggiqls ggvfkiakqs nktwslmhpv ddavslltrg grlsckfrls
      481 galtnnqfgl giylytdval pdvvamtgtg npflmsfftq ttdgklnlmh hkkagntklg
      541 efgnysndwq tlelvftags atvtpklngv agpafqvikd sltlglnalt ltditknaay
      601 gveieslvle inapass
//
LOCUS       WP_235239064              64 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4153 domain-containing protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235239064
VERSION     WP_235239064.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025067.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13687.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..64
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..64
                     /product="DUF4153 domain-containing protein"
                     /calculated_mol_wt=7012
     Region          <3..42
                     /region_name="DUF4153"
                     /note="Domain of unknown function (DUF4153); cl24047"
                     /db_xref="CDD:474134"
ORIGIN      
        1 mtlnyanfda riaeknsery eqtgkidvsy lgrlsadaap alqklhakhp elagldeali
       61 dlre
//
LOCUS       WP_235239076             367 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Fusobacterium varium].
ACCESSION   WP_235239076
VERSION     WP_235239076.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..367
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=43478
     Region          <93..360
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mkgiylnfvq eyeigvikkl nfqiksfnkl gvnikkckii egkfyiddff innyhtgtnf
       61 kekllrkidl yfclkklqkt klyedidfmy iryfysspwf isylkflkki nlkiilevpt
      121 ypydgevkds fftrwdkkyr eelhkyvdkv vtysddkeiw ripcinisng idleeiqmid
      181 rkkteskiif tsvsncsiwh gidrliysil eyiknngkek iifnivgegn etfklkqivk
      241 enklekyvif hgkklgkeld eiynesdigi gclgnfrkgl yeggalknke ycakglpvvv
      301 agpdydfnnc efiyqvsqde sliniekiie wyknlnmape eirkyaednl swniqmkkvv
      361 esikeli
//
LOCUS       WP_235239086             356 aa            linear   BCT 02-MAR-2025
DEFINITION  fimbrial protein [Escherichia coli].
ACCESSION   WP_235239086
VERSION     WP_235239086.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012635.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00419.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..356
                     /product="fimbrial protein"
                     /GO_component="GO:0009289 - pilus [Evidence IEA]"
                     /GO_process="GO:0007155 - cell adhesion [Evidence IEA]"
                     /calculated_mol_wt=37748
     Region          7..356
                     /region_name="Fimbrial"
                     /note="Fimbrial protein; cl01416"
                     /db_xref="CDD:445401"
ORIGIN      
        1 mqiifgekcv sllrlffaav lmlwcaqtaa ysgqchttqg npyigvnfgv ktleeeanta
       61 gvvkdkfyqw nesndyyvsc dcdkdnvrsg rwafavdspl vylgdnwyki ndylaakvll
      121 qvkgssptav pfenvgtggd trwhicdpgg qrlggqgasg nsgsfslkil qpfvgsvvip
      181 pmalarlyec ynipagdsct ttgtpvlvyy lsgtinslgs csvnagetie vdlgdvfaan
      241 frvvghkplg artaelaipv rcntgnaglv nvnlsltatt dpsypqaikt srpgvgvvvt
      301 dsqnniispa ggtlplsipd dadsiarmnv ypvsttgvpp etgrfeatat vrinfd
//
LOCUS       WP_235239114             175 aa            linear   BCT 02-MAR-2025
DEFINITION  toxin-activating lysine-acyltransferase [Escherichia coli].
ACCESSION   WP_235239114
VERSION     WP_235239114.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 175)
  AUTHORS   Trent,M.S., Worsham,L.M. and Ernst-Fonberg,M.L.
  TITLE     HlyC, the internal protein acyltransferase that activates hemolysin
            toxin: role of conserved histidine, serine, and cysteine residues
            in enzymatic activity as probed by chemical modification and
            site-directed mutagenesis
  JOURNAL   Biochemistry 38 (11), 3433-3439 (1999)
   PUBMED   10079090
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014813.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02794.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..175
                     /product="toxin-activating lysine-acyltransferase"
                     /GO_component="GO:0005737 - cytoplasm [Evidence IEA]"
                     /GO_function="GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009404 - toxin metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=20195
     Region          16..157
                     /region_name="HlyC"
                     /note="ACP:hemolysin acyltransferase (hemolysin-activating
                     protein) [Posttranslational modification, protein
                     turnover, chaperones]; COG2994"
                     /db_xref="CDD:442233"
ORIGIN      
        1 mrngkydvls plysgepvne aevlgaavwl wmhsplhrda plhtlpdlll pvikhrqyvv
       61 ateqgrpvff msqawlspea earfltqpai lmpqsdwnsg drmwvcdwva pfghtpdmsr
      121 lvrqdifprl cwrslyhrgq qtglrvmnfr gaqvsreear qwrvqhslav dvper
//
LOCUS       WP_235239116             182 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Paenibacillus alkaliterrae].
ACCESSION   WP_235239116
VERSION     WP_235239116.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 182)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 182)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..182
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=20736
     Region          94..160
                     /region_name="RimI"
                     /note="Ribosomal protein S18 acetylase RimI and related
                     acetyltransferases [Translation, ribosomal structure and
                     biogenesis]; COG0456"
                     /db_xref="CDD:440224"
ORIGIN      
        1 mmptlkvape eltfvpldkv siehvqgfsc gnrlidnyff ttykarydhq nglaattvii
       61 yeekavgfft aactqvqisk eeasslgist flvpaievkf laveerfqdk gigtlainki
      121 iydvyqfsqi facrylflws vpderalsfy qnryfedtgt vnsenlhlmm fqipddadie
      181 ey
//
LOCUS       WP_235239146             144 aa            linear   BCT 02-MAR-2025
DEFINITION  CGGC domain-containing protein [Fusobacterium varium].
ACCESSION   WP_235239146
VERSION     WP_235239146.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020400.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08821.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..144
                     /product="CGGC domain-containing protein"
                     /calculated_mol_wt=16359
     Region          10..122
                     /region_name="CGGC"
                     /note="CGGC domain; cl02356"
                     /db_xref="CDD:470548"
ORIGIN      
        1 menikliiti qceiakrrcs gfhcmnsfft rtglfkdypk neelrfltfq cggchgkgin
       61 sllgnvnkll akenlitkne vavhfascva fdnhhsdrcp finamkkivn kmgyeniieg
      121 sylsktatrr reegvykdyi slnk
//
LOCUS       WP_235239269             361 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Escherichia coli].
ACCESSION   WP_235239269
VERSION     WP_235239269.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 361)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 361)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..361
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=38496
     Region          75..>239
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(75..76,79,141,170,173,193,196)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:99738"
     Site            196
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99738"
ORIGIN      
        1 mktfplqslt iieaqqkqfa lvdsicrhfp gsefltggdl gltpglnqpr vtqrveqvla
       61 dafhaqaaal vqgagtgair aglaallkpg qrllvhdapv ypttrviieq mgltlitvdf
      121 ndlsalkqvv deqqpdaalv qhtrqqpqds yvladvlatl raagvpaltd dnyavmkvar
      181 igcecganvs tfscfklfgp egvgavvgda dvinriratl ysggsqirga qalevlrglv
      241 fapvmhavqa gvserllall nggavpevks avianaqskv livefhqpia arvleeaqkr
      301 galpypvgae skyeipplfy rlsgtfrqan pqsehcairi npnrsgeetv lrilresias
      361 i
//
LOCUS       WP_235239275             477 aa            linear   BCT 02-MAR-2025
DEFINITION  amino acid permease [Escherichia coli].
ACCESSION   WP_235239275
VERSION     WP_235239275.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..477
                     /product="amino acid permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=51997
     Region          1..459
                     /region_name="AA_permease_2"
                     /note="Amino acid permease; cl45918"
                     /db_xref="CDD:459263"
ORIGIN      
        1 msdtkrntig kfgllsltfa avysfnnvin nnielglasa pmfflatify fipfcliiae
       61 fvslnknsea gvyawvkssl ggrwafitay tywfvnlfff tsllprviay asyaflgyey
      121 imtpvattii smvlfafstw vstngakmlg pitsvtstlm llltlsyill agtalvggvq
      181 padaitvdam ipnfnwaflg vttwifmaag gaesvavyvn dvkggsksfv kviilagifi
      241 gvlysvssvl invfvsskel kftggsvqvf hgmaayfglp ealmnhfvgl vsftamfgsl
      301 lmwtatpvki ffseipegif gkktvelnen gvparaawiq fliviplmii pmlgsntvqd
      361 lmntiinmta aasmlpplfi mlaylnlrak ldhlprdfrm gsrrtgiivv smliaifavg
      421 fvastfptga niltiifynv ggiviflgfa wwkyskyikg ltaeerhiea tpasnvd
//
LOCUS       WP_235239277             110 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2645 family protein [Escherichia coli].
ACCESSION   WP_235239277
VERSION     WP_235239277.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10840.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..110
                     /product="DUF2645 family protein"
                     /calculated_mol_wt=13036
ORIGIN      
        1 mlkqkiktif eallyimlty wlidsflafn kydwmlesgg nicsipsvsg edrilqamia
       61 afflltplii lilrklfmre mfefwvyvfs lgiclvcgww lfwgrfifcy
//
LOCUS       WP_235239310             378 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6155 family protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235239310
VERSION     WP_235239310.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039671.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19652.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..378
                     /product="DUF6155 family protein"
                     /calculated_mol_wt=44740
     Region          3..166
                     /region_name="PRiA4_ORF3"
                     /note="Plasmid pRiA4b ORF-3-like protein; pfam07929"
                     /db_xref="CDD:462319"
     Region          203..375
                     /region_name="DUF6155"
                     /note="Family of unknown function (DUF6155); pfam19652"
                     /db_xref="CDD:437484"
ORIGIN      
        1 mtyickieln diapkiwrqf qfhpeitfhq lhkiiqivmg wedyhlyefe iggrviglpd
       61 ptyadmetre vlnarreivi khlqkentef sytydfgdnw rhtikleqmd ttafvetspm
      121 clggerscpq edvggiwghq hmmealftpn hpeydefkew lkegydpetf rrdevndklr
      181 qrrnklipks llpqaedkkp vkltktalnk hlkrmsqeql ielvkecygs skdmermlav
      241 kilgeealep mfheyrkkve heffpqrghg klrlqeakka isefekltgn ekytlelklf
      301 yvemgvsftl tygdiddrfy dsmeavyadv irtvnfddta elfeeyeeri saivsdtkgi
      361 gwgfhdslsh mherlrwm
//
LOCUS       WP_235239388             751 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5682 family protein [Escherichia coli].
ACCESSION   WP_235239388
VERSION     WP_235239388.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040143.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18934.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..751
                     /product="DUF5682 family protein"
                     /calculated_mol_wt=82291
     Region          20..716
                     /region_name="DUF5682"
                     /note="Family of unknown function (DUF5682); pfam18934"
                     /db_xref="CDD:436841"
ORIGIN      
        1 mseplivgir hhspacarlv ksliesqrpr yvliegpadf ndrvdelfla hqlpvaiysy
       61 cqyqdgaapg rgawtpfaef spewqalqaa rriqaqtyfi dlpcwaqsee eddspdtqde
      121 sqalllratr mdnsdtlwdh lfedesqqta lpsalahyfa qlrgdasgda lnrqreafma
      181 rwigwamqqn ngdvlvvcgg whapalakmw recpqkinkp elpsladavt gcyltpysek
      241 rldvlagyls gmpapvwqnw cwqwglqkag eqllktiltr lrqhklpast admaaahlha
      301 malaqlrght lplrtdwlda iagslikeal naplpwsyrg vihpdtdpil ltlidtlagd
      361 gfgklapstp qpplpkdvtc elertaislp aeltlnrftp dglaqsqvlh rlaileipgi
      421 vrqqgstltl agngeerwkl trplsqhaal ieaacfgatl qeaarnklea dmldaggigs
      481 ittclsqaal aglasfsqql leqltlliaq enqfaemgqa levlyalwrl deisgmqgaq
      541 ilqttlcati drtlwlcesn grpdekefha hlhswqalch ilrdlhsgvn lpgvslsaav
      601 allerrsqai hapaldrgaa lgalmrlehp nasaeaaltm laqlspaqsg ealhgllala
      661 rhqlacqpaf iagfsshlnq lseadfinal pdlraamawl pprergtlah qvlehyqlaq
      721 lpvsalqmpl hcppqaiahh qqleqqalas l
//
LOCUS       WP_235239362             589 aa            linear   BCT 02-MAR-2025
DEFINITION  heparinase II/III domain-containing protein [Fusobacterium varium].
ACCESSION   WP_235239362
VERSION     WP_235239362.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 589)
  AUTHORS   Meier,E.L., Razavi,S., Inoue,T. and Goley,E.D.
  TITLE     A novel membrane anchor for FtsZ is linked to cell wall hydrolysis
            in Caulobacter crescentus
  JOURNAL   Mol Microbiol 101 (2), 265-280 (2016)
   PUBMED   27028265
REFERENCE   2  (residues 1 to 589)
  AUTHORS   Dong,W., Lu,W., McKeehan,W.L., Luo,Y. and Ye,S.
  TITLE     Structural basis of heparan sulfate-specific degradation by
            heparinase III
  JOURNAL   Protein Cell 3 (12), 950-961 (2012)
   PUBMED   23011846
REFERENCE   3  (residues 1 to 589)
  AUTHORS   Shaya,D., Tocilj,A., Li,Y., Myette,J., Venkataraman,G.,
            Sasisekharan,R. and Cygler,M.
  TITLE     Crystal structure of heparinase II from Pedobacter heparinus and
            its complex with a disaccharide product
  JOURNAL   J Biol Chem 281 (22), 15525-15535 (2006)
   PUBMED   16565082
REFERENCE   4  (residues 1 to 589)
  AUTHORS   Pojasek,K., Shriver,Z., Hu,Y. and Sasisekharan,R.
  TITLE     Histidine 295 and histidine 510 are crucial for the enzymatic
            degradation of heparan sulfate by heparinase III
  JOURNAL   Biochemistry 39 (14), 4012-4019 (2000)
   PUBMED   10747789
REFERENCE   5  (residues 1 to 589)
  AUTHORS   Su,H., Blain,F., Musil,R.A., Zimmermann,J.J., Gu,K. and
            Bennett,D.C.
  TITLE     Isolation and expression in Escherichia coli of hepB and hepC,
            genes coding for the glycosaminoglycan-degrading enzymes heparinase
            II and heparinase III, respectively, from Flavobacterium heparinum
  JOURNAL   Appl Environ Microbiol 62 (8), 2723-2734 (1996)
   PUBMED   8702264
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019552.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07940.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..589
                     /product="heparinase II/III domain-containing protein"
                     /GO_function="GO:0016829 - lyase activity [Evidence IEA]"
                     /calculated_mol_wt=71100
     Region          <66..307
                     /region_name="AlgLyase"
                     /note="Alginate Lyase A1-III; enzymatically depolymerizes
                     alginate, a complex copolymer of beta-D-mannuronate and
                     alpha-L-guluronate, by cleaving the beta-(1,4) glycosidic
                     bond; cl00179"
                     /db_xref="CDD:444729"
     Region          365..>527
                     /region_name="Hepar_II_III"
                     /note="Heparinase II/III-like protein; pfam07940"
                     /db_xref="CDD:429747"
ORIGIN      
        1 mehfkkaiky yratfngeiq ekikrkilik tgllkkinfi dtnqieikin peflfktkii
       61 irenfenkyk ifnkeldllk kidwfegnkn snlewfneki gffkdikvvw einrlqflty
      121 lslndrkkea lvifddwikn npyniginwy snlevairsi siinflsiig seylekykkl
      181 iylhgkhifq dinytekcip nnhligevaa lyciahliei qekeewlnks kkilkkylkh
      241 lhddgtyeea slsyhkfviq mylmvwlfsk ktndnfiene ienklkkayi flntlkkpni
      301 eypdfgdnde gffykleiee tfdsfvkslg cflkqeeyfg diqkllqiyq vendikyeki
      361 enkifypegk yfvyknkkny ifihnqnqey hshsdgmtie lmldnknilv dsgtfnynid
      421 kkkrryyrgt lshntvwidg dqaeqigsfr winspdtele yleendkyfv ngmikksknk
      481 khirkvkfdk nfneikieee iynadnfiln wifseeielk kitegkygin etdyeieifs
      541 kenikiellr cnysteynie ketrkiqikn qekkpiykiv tifkkrkdl
//
LOCUS       WP_235239442             867 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Fusobacterium varium].
ACCESSION   WP_235239442
VERSION     WP_235239442.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 867)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..867
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=100224
     Region          7..>119
                     /region_name="PleD"
                     /note="Two-component response regulator, PleD family,
                     consists of two REC domains and a diguanylate cyclase
                     (GGDEF) domain [Signal transduction mechanisms,
                     Transcription]; COG3706"
                     /db_xref="CDD:442920"
     Region          <167..553
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
     Region          <584..748
                     /region_name="GGDEF"
                     /note="GGDEF domain, diguanylate cyclase (c-di-GMP
                     synthetase) or its enzymatically inactive variants [Signal
                     transduction mechanisms]; COG2199"
                     /db_xref="CDD:441801"
     Region          765..>818
                     /region_name="RocR"
                     /note="RocR-type transcriptional regulator, contains PAS,
                     AAA-type ATPase, and DNA-binding Fis domains
                     [Transcription, Signal transduction mechanisms]; COG3829"
                     /db_xref="CDD:443041"
ORIGIN      
        1 mpirkqvliv ddnhmnrmil knilsstynv iqaengqkal eilkkekeki saifldivmp
       61 vmdgytflah kmkdgelihi pvivttqyed eatevealsr gaadflvkpy rpaiilhrla
      121 niikmresss finkiekdsl tgiynkdffy fktttffkdl skknyyivfa dierfklvnd
      181 tygskegdrl lkytadiine eingygicgr aeadhfiicv vdiadiegll eniskrvsef
      241 nknmnivihy giyqvedrsi sielmcdram iaastvknky dkkfayydds irkkllqeqm
      301 lindmrtsla errfkvfyqp kydfktekiv gvealvrwdh pklgmvspgv fielferngf
      361 iteidyfvwe eackklkewt dngyknlsis vnvsrinlyn nnlpnlliel vkkynispks
      421 lhleitesay tenseqiieg aerlkkigfi iemddfgtgy sslnmlaklp idvlkldmgf
      481 vhsiekdkns lillkviinl akelqlaiva egvetnkqvn ilknigcqya qgyyysppis
      541 eekldkifie nnsiislgkt gellnlkdke lfevaysdei dlnikkmiyd lkyhsehdsl
      601 tgllnrrelk ervnkilenn diegtfiiid idnfkrindr yghvkgdeil keiseklkns
      661 fskidsisrl ggdefvvftl gstdesriel mmnnffemik kikidipitc sagicfssks
      721 idydslyyna dmallsakis gknnykiyte kmekyspinh lknvewvldq ifemvfisda
      781 etyevmyink ptceklgksr eeclgkkchs lmwkssipce rcckisncie kfyteetkld
      841 dgtsiqikak mvewegnkyk ihylnki
//
LOCUS       WP_235239456             379 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Fusobacterium varium].
ACCESSION   WP_235239456
VERSION     WP_235239456.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 379)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 379)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 379)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..379
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=43360
     Region          39..373
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(145..146,149,176)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238559"
ORIGIN      
        1 mikknflklf ticlfisfif lgknvysnel qqheksnrit ftdlsnrkie idgpvnrifl
       61 gfyeesylav aenfdkvvsi skgewadffn dqynayekqm peiakiidtg siykgsfsme
      121 tllnskpqva ivapfqyetl aenidkleks gikvividyn sqtlenhiks tkilgkitgn
      181 ekraeelirn yenalnevke rveniknrkk vyielgnlga dqignsygny lwgslvklag
      241 gnniaenkid sygplspeyi ltsnpdtiff aganwandag nrvligfnvs peqtwkrltp
      301 ytkrtgwkkl naikngeiya vnhgglrsiy dyvyvqyiak slypelfedi npkenlenfy
      361 kkylpitpeg tfmtkynkk
//
LOCUS       WP_235239492             746 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 C-terminal domain-containing protein
            [Paenibacillus alkaliterrae].
ACCESSION   WP_235239492
VERSION     WP_235239492.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 746)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014026.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01915.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..746
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=82518
     Region          10..719
                     /region_name="alph_arabinopyran"
                     /note="exo-alpha-(1->6)-L-arabinopyranosidase; NF041610"
                     /db_xref="CDD:469494"
ORIGIN      
        1 mnieeliskm tveekislla ggsfwntqpi erlnipaiil tdgphglrls igtdpgemls
       61 ntqpatafpi esamaatwne qlirelgati aeecqyydvg iilgpgmngk rsplggrnfe
      121 yfsedpyltg klgtalvkgi qeggigtsik hfvaneqesn rmvvssevde rtlrelymlp
      181 femvvkeaep wtvmcsynkv ngthmannnk ylngilkqew gfeglvmsdw gavvdkvpsv
      241 qygldlempg pgtrnaevme ayrnnqitde qlddhvrril kvirkvleqk revssidveq
      301 hhaiarkvae eaivllknea ailplakqak vavlgkfaev prfqgggssh mnpalldspl
      361 deiakfaqtv ygagydeidn eellkeacel aagqdaviif vgtteiiese gydradlsip
      421 cshtqlieev skvnpnvivv vnsgsvtdig ayesqvkgiv qawlpgqagg saianilfge
      481 vnpsgkltet fplalehnps ylsfpgninq vkysesifvg yryydakkld vkypfgfgls
      541 ytefeysnly lssnslkdse vlkvtvdvkn vgsragkevv qvyvrdvkss vmkadkelkg
      601 ftkvelapge tksvqielne rdfshyvehl gkfavesgef qilvgassrd irlaetivft
      661 asedvreplt llhslqewlk ddrntdvvhs licqmkideh spmypiflgm pirtilnflp
      721 sfgypqevie qihemfgivl avreng
//
LOCUS       WP_235239519             259 aa            linear   BCT 02-MAR-2025
DEFINITION  squalene/phytoene synthase family protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235239519
VERSION     WP_235239519.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012705.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00494.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..259
                     /product="squalene/phytoene synthase family protein"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=28907
     Region          2..>239
                     /region_name="Isoprenoid_Biosyn_C1"
                     /note="Isoprenoid Biosynthesis enzymes, Class 1; cl00210"
                     /db_xref="CDD:469660"
     Site            order(11,30,33..34,37,41,141,169..170,173,177,181)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:173830"
     Site            order(37..38,41,173..174,177,181)
                     /site_type="active"
                     /note="substrate-Mg2+ binding site [active]"
                     /db_xref="CDD:173830"
     Site            37..41
                     /site_type="other"
                     /note="aspartate-rich region 1"
                     /db_xref="CDD:173830"
     Site            173..181
                     /site_type="other"
                     /note="aspartate-rich region 2"
                     /db_xref="CDD:173830"
ORIGIN      
        1 msmlqktsrt fyipisrlvp glkeavasay lcmraideie dhetlavdlk aelllgihda
       61 fqspdviset qkllaphrea lpavsvride waslcpvsvn pvvyryiamm skqmadwvhi
      121 gwkirteedl dgytysvagm vgemlseiwf wfdgtksdmk kavafgrglq avnilrnrae
      181 dlergvdfyp dgwgskemlk ytrrnlkmad syikdlkggp aldfckiplt lanatvklia
      241 aggnkltrda vmklvnsin
//
LOCUS       WP_235239523            1977 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235239523
VERSION     WP_235239523.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1977
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..1977
                     /product="DUF6531 domain-containing protein"
                     /calculated_mol_wt=220498
     Region          378..1377
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
     Region          1702..1788
                     /region_name="Rhs_assc_core"
                     /note="RHS repeat-associated core domain; TIGR03696"
                     /db_xref="CDD:274730"
     Region          1784..1891
                     /region_name="EstA"
                     /note="Triacylglycerol esterase/lipase EstA, alpha/beta
                     hydrolase fold [Lipid transport and metabolism]; COG1075"
                     /db_xref="CDD:440693"
ORIGIN      
        1 mskevkskrp rsvwgqigkc mlafivlltg lpllpnanlp rayadtslqi npyslssvyn
       61 grtevnfsfd dpdpddetqe shetvisler ngstvatlkn gtyptetnns ytwngkange
      121 paeegsyqir vtptrfpnng nsgsvqiinp kppqpimdie sdtkseehti rgiaeigtti
      181 dlkmkrirrv gndttvdngs vetlaenikv nlrksswala vpvnasyftn fpersdnlpe
      241 dyvgewevkv rlpayeiaei qavatrvfdg kksdssktlr vlryktpawn inwsviasyy
      301 ynvtekeaiv ekigkvavdn gfpvedcngq tcygtleegv nllvmepqqa geigqedder
      361 iheeytnrng hpiaeafdpv nlatgdfvfr hpnmsvqavi pldltltyhs rdrydgyfgv
      421 gwhhtyerrl efrengivya vspegashrf eaagngqyag qdgiydtltk nqdgtytqqt
      481 pqrwsyiyrr dgllyqildp ngnriqltyl gslltdvatn gakltltyga ggkvarvtdh
      541 sgryaayeyd avnhdltami lpdgariaye yddkhriiei lnpnetasli neydeqdrvv
      601 rqrdfagvwg sieydpaemr tvttdalgrq tvyqyderyr ktavtyadgt verylydkhd
      661 nliemtdrgg rvwgymydds gnlirakdpe gyqteiryna fnlpeeivdp lghktalgyd
      721 gngnltaitd aeggvsriav dgrgipvsvt nangetasie ndeygfarfi tdplgnrqem
      781 irdplhrvtg lldalgqrmq meydprdrit aridalgnte ryeydkdsnl tgytdaegsr
      841 tvytydsyar viavtdalgn atrneydavg nltkrtdpng aetvysydet nrleavtdpe
      901 gnvhryeydn ngnlkrfvdp nggetrieyd grnlplkvtd aaggvslmsy daagrlrqet
      961 dplghavlyt ydalgrlteq tdalgqktvy tydssgrliq tvnpnggvwq ldydprgmlv
     1021 kitgplgqas emtrdalgrv idsideagkt tsyrydaagq vtalinplgh mtemaydarg
     1081 lltalkdakg qttqygydpl grlhkvtnal gaatayghda mgnitsktda lgritsyeyn
     1141 lnsqlireig peqrvteliy drlgnrtgvk lsdgettsyg ydlmsrltdi lypdgkqvgy
     1201 eydaagrrtr mtdelgetsy tydalnrltk vtdpyeqtiq yewtpsgqrs kivypdaavv
     1261 hyqydlldrm tavtdaagrv tsyaydvrgm liskslptmg qssyryddag qllelthqnq
     1321 fgkimeqmty aydpvgnrir serlsdgdde dggdsqeliv tdyaydalnq lidvqtqnav
     1381 svelpvstqy lydavgnrls ktsvwgevtd tesytydaad rllqwtnsse mkdyiydpqg
     1441 nllqvmqkdl lsetetepqw sepevieqyt wngasrlieq inrsgdvtry aydgdgnrmk
     1501 mivdlayipe dgrgtgdgng gsdclevppg fvppgladkc gnadggsepg ngnddgsgap
     1561 dcftvppgfv ppgladkcgg ettypddhpg gtrdgwekqf kkkhwefhyt ndvslalpep
     1621 iqvteadptk wketyvygag gerigmtylp aydhdngwep spgaggaepg vspktlyyma
     1681 dglgsalgvm tedgrmsary hydefgiplp akkfdpnwpg pdnlfgytgl gydytsglty
     1741 araryyqpel grfisedtye gdmwnpqsqn ryayvhnnpl kyvdptghkv wlihgtfsnp
     1801 etwtpefkey igdlynedva thywsggnnk sarkegaeal aeeiikwrqe npdepirlvg
     1861 hshggnvaim vanllgeenv kvetlvtvat pvrgyqlkqe vgqhlhvyne rdgvqvnggs
     1921 iwllgkarrt fsgaanvkve vdekydgies hsvmhsnvdv wkkyiqglla dfyvkpe
//
LOCUS       WP_235239531             408 aa            linear   BCT 02-MAR-2025
DEFINITION  SNF2-related protein [Fusobacterium varium].
ACCESSION   WP_235239531
VERSION     WP_235239531.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 408)
  AUTHORS   Rowbotham,S.P., Barki,L., Neves-Costa,A., Santos,F., Dean,W.,
            Hawkes,N., Choudhary,P., Will,W.R., Webster,J., Oxley,D.,
            Green,C.M., Varga-Weisz,P. and Mermoud,J.E.
  TITLE     Maintenance of silent chromatin through replication requires
            SWI/SNF-like chromatin remodeler SMARCAD1
  JOURNAL   Mol Cell 42 (3), 285-296 (2011)
   PUBMED   21549307
REFERENCE   2  (residues 1 to 408)
  AUTHORS   Linder,B., Cabot,R.A., Schwickert,T. and Rupp,R.A.
  TITLE     The SNF2 domain protein family in higher vertebrates displays
            dynamic expression patterns in Xenopus laevis embryos
  JOURNAL   Gene 326, 59-66 (2004)
   PUBMED   14729263
REFERENCE   3  (residues 1 to 408)
  AUTHORS   Eisen,J.A., Sweder,K.S. and Hanawalt,P.C.
  TITLE     Evolution of the SNF2 family of proteins: subfamilies with distinct
            sequences and functions
  JOURNAL   Nucleic Acids Res 23 (14), 2715-2723 (1995)
   PUBMED   7651832
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012403.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00176.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..408
                     /product="SNF2-related protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0140658 - ATP-dependent chromatin
                     remodeler activity [Evidence IEA]"
                     /calculated_mol_wt=47277
     Region          <2..396
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          <3..174
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 mnkvlviapk kvaeatwske aekwdhlkll rivpilgssq krikalntpg diyvinrenv
       61 vwlveytrnn wpfdmvvvde fssfkshqak rfkaltwvrk hiqrfvgltg tptpnglmdl
      121 waqiylldqg erlgkfishy reryfnpgqr drnvifkydl kegaaesiqe kisdicismk
      181 aedylqlpdi tfnsipvvld nkamkeyeel ekkmileled ktidvtsaaa lsnklmqlan
      241 gaiydenrgi hevhnckiea fmelieklnr kaalvfynfr hdlarlqeal kktglkvril
      301 ktvedqdawn kkeidillth passayglnl qeggnhviwf glnwslelyq qankrlhrqg
      361 qkekvivhhl vvqdtrdedv ikalntkgdv qealleslkv ridkyrrk
//
LOCUS       WP_235239581             770 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein [Fusobacterium varium].
ACCESSION   WP_235239581
VERSION     WP_235239581.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024554.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13155.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..770
                     /product="toprim domain-containing protein"
                     /calculated_mol_wt=88676
     Region          164..252
                     /region_name="Toprim_2"
                     /note="Toprim-like; pfam13155"
                     /db_xref="CDD:463793"
ORIGIN      
        1 mknysykqyg delrfdfcpi cnkekkenpc fsvniktgny ichttgkggn ikdlddfefk
       61 lpeikekkpr kkdidfself kkradhhlgg dwlsylkgrs isekvlnrfc rlgknntmmi
      121 pitdgekvva ikyrtidkkl scetgsssdy fvnwqnvenk syliivegei dllsaveagy
      181 dnvvsipfgc knlkcidnqk kwiesfskvi iavdndepge kckdeitrkl wdirkklytv
      241 kmgkykdfne vlmgegpagi ikviqqadri gyistpfyve ddgyyawqke nytritdflv
      301 kitgysdgyi vgvvtnngre kefkakktel ltkngivehl gyylgssqsi akfwswlide
      361 nkeqfmleip hygiieniyy dggsrvicsk edlkiekqen idvlteeekg wlnenliylr
      421 kdpnqsllgi cwalgrfhih esypilevsg ttsigkteyv efisrllfgn keniksfttl
      481 tnhqirslss csnitpwvid evkitgkdlk ekaielysti ravydnktln qgnltaklte
      541 fklctpliis getelsdvsm knrmistnlt kdnkssdeif fklkntqlle klgkavlqkr
      601 ldtgmidisl qqvreflktv kderqlyngr ciltgfkaln evikpdekvs vefikflneq
      661 lsneydvvsn flellglvad sgkeiktfya vkdgkhyvrf nllykaiaee hfktnstlel
      721 ldmrtlkkql ieskfiiksq vlarfpkddf rsdtfparae eiqsndifnl
//
LOCUS       WP_235239602             145 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleotidyltransferase family protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235239602
VERSION     WP_235239602.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 145)
  AUTHORS   Kuchta,K., Knizewski,L., Wyrwicz,L.S., Rychlewski,L. and
            Ginalski,K.
  TITLE     Comprehensive classification of nucleotidyltransferase fold
            proteins: identification of novel families and their
            representatives in human
  JOURNAL   Nucleic Acids Res 37 (22), 7701-7714 (2009)
   PUBMED   19833706
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017820.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06042.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..145
                     /product="nucleotidyltransferase family protein"
                     /calculated_mol_wt=17177
     Region          4..132
                     /region_name="NTP_transf_6"
                     /note="Nucleotidyltransferase; cl01435"
                     /db_xref="CDD:470202"
ORIGIN      
        1 mklkneedii rliqedvwmi dileavksld lpdwwvcagf vcskiwdvlh gftvrtplpd
       61 idivyfdnsn ieeieektle eklrningiq diinlqlkpt pyfcetnera kiyedrivkk
      121 nwkdrwskin ivhvhrpfgy gvmif
//
LOCUS       WP_235239606             405 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Paenibacillus alkaliterrae].
ACCESSION   WP_235239606
VERSION     WP_235239606.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..405
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45352
     Region          20..400
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(21..22,25..26,29,61,112..113,115,116,119,139,
                     142..143,146,232,235..236,239..241,244,272,276,327..328,
                     332,336,352,355..356,359..360,363)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mfglsrlpkn argcllyepl flipysmfst yaaiymfemg lsetaigwvt tltllvqvfs
       61 sfisgyltdr lgrkwallyf dvlswtvgtl lwavsqniwf fiaaavvngf qrvphtafyc
      121 llvedtdpkd rtyvfsvlqf vamlgglfap lggllvahyg lipgtrimyv lacvcmtiqf
      181 igrhfatret diglrkmeet rgvgfmtglr eykgvirdma gnrplllifg vyilfqfqlt
      241 lkstflslff vdhlhldsgl vsifpavtsv fmllsmwlll prlgddrlht vmlwgffisl
      301 vsnlvlilpl pgilfwlifs tilaavgtmm typyleaava naiddenras vfailsvlil
      361 lvispsgiig gwaykwnptm pfllivisfa asmallvmyk rsshn
//
LOCUS       WP_235239706              53 aa            linear   BCT 02-MAR-2025
DEFINITION  HU family DNA-binding protein, partial [Fusobacterium varium].
ACCESSION   WP_235239706
VERSION     WP_235239706.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 53)
  AUTHORS   Vis,H., Mariani,M., Vorgias,C.E., Wilson,K.S., Kaptein,R. and
            Boelens,R.
  TITLE     Solution structure of the HU protein from Bacillus
            stearothermophilus
  JOURNAL   J Mol Biol 254 (4), 692-703 (1995)
   PUBMED   7500343
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00216.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..53
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         <1..53
                     /product="HU family DNA-binding protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0030527 - structural constituent of
                     chromatin [Evidence IEA]"
     Region          <1..50
                     /region_name="HU_IHF"
                     /note="DNA sequence specific (IHF) and non-specific (HU)
                     domains; cl00257"
                     /db_xref="CDD:444792"
     Site            order(7,9..11,13,15,19,21..22,40,42,44..49)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:259853"
ORIGIN      
        1 almkydsvtf vnigifeile rkprlvsnps treimeiypk kvvrfraskn imk
//
LOCUS       WP_235239734            1265 aa            linear   BCT 02-MAR-2025
DEFINITION  autotransporter domain-containing protein [Fusobacterium varium].
ACCESSION   WP_235239734
VERSION     WP_235239734.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium varium
  ORGANISM  Fusobacterium varium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 1265)
  AUTHORS   Oomen,C.J., van Ulsen,P., van Gelder,P., Feijen,M., Tommassen,J.
            and Gros,P.
  TITLE     Structure of the translocator domain of a bacterial autotransporter
  JOURNAL   EMBO J 23 (6), 1257-1266 (2004)
   PUBMED   15014442
REFERENCE   2  (residues 1 to 1265)
  AUTHORS   Veiga,E., Sugawara,E., Nikaido,H., de Lorenzo,V. and Fernandez,L.A.
  TITLE     Export of autotransported proteins proceeds through an oligomeric
            ring shaped by C-terminal domains
  JOURNAL   EMBO J 21 (9), 2122-2131 (2002)
   PUBMED   11980709
REFERENCE   3  (residues 1 to 1265)
  AUTHORS   Henderson,I.R., Navarro-Garcia,F. and Nataro,J.P.
  TITLE     The great escape: structure and function of the autotransporter
            proteins
  JOURNAL   Trends Microbiol 6 (9), 370-378 (1998)
   PUBMED   9778731
REFERENCE   4  (residues 1 to 1265)
  AUTHORS   Pohlner,J., Halter,R., Beyreuther,K. and Meyer,T.F.
  TITLE     Gene structure and extracellular secretion of Neisseria gonorrhoeae
            IgA protease
  JOURNAL   Nature 325 (6103), 458-462 (1987)
   PUBMED   3027577
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015737.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03797.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1265
                     /organism="Fusobacterium varium"
                     /db_xref="taxon:856"
     Protein         1..1265
                     /product="autotransporter domain-containing protein"
                     /calculated_mol_wt=133799
     Region          <23..832
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          991..1238
                     /region_name="Autotransporter"
                     /note="Autotransporter beta-domain; pfam03797"
                     /db_xref="CDD:461054"
ORIGIN      
        1 miekvmkvvk ssnkrrgrni tvgtvvgfll sctavmgvtg dnylwikkds geikfsidnn
       61 ttpfstenpy dentwnridy innitlsgtn nlsgsegygl rlsedlgnfn finngvitgt
      121 gdslgygiyn esgsittlvn sglmtgtgyd vgsgvynegg sitnlvnsgl msgtgteegt
      181 giynsdngsi gtltnsglit gtgkvegsgi ynyysnitnl vnsglisgtg dtdgfgiyns
      241 egsvgtltns glitgtgdng gsgiynergs igtltnsgli tgtgdtdgtg iynpdgnigt
      301 ltnsglitgt gdtdgtgisn ydgsivtltn sglitgtgng sssgiynesg sigtltnsgl
      361 itgtgnntcy giynesgnit tlvnsglitg tgedmsygiy nsgsitnlvn selisgtgel
      421 dgygiynydd nigtltnrgl iigtgdnggy giynydgsit tlvnrgliig tgdsggygiy
      481 ngkgietltn tgviygkdna iknesgtitt aknygilvng ddgkevvdgl tvvnsastkn
      541 qilnkglifk aldgggykag eedykkfget fdndagitii nakalgndkd ditgteslkl
      601 engtlsynds kdnhkeekis sneryilngi tntlevsgkn nelndsiina yetavvmngk
      661 esmltlnntv vngglsgent vkiegdgntl nvqgnsving vgtaitvtgd nnalvlegnv
      721 vvngkmestg nnilslngna edgmniyhdi sgfinmnien nvtffedvkv tgtetvtvdk
      781 dgvlnlrlkk dtttystipt avhafsgtds ttikgasege agtlnfitng igkeiyvnme
      841 nielenmkvr ansiidkvei sdkyihlgag sdlsgivnpk vskydsldgi ykslysstde
      901 nldalrdils mtylgknydy nnatdeeqlk tlmsyldsiy tgtpysysse lsrksmgmfr
      961 diitdnqfrp dlnrwlvmgg lthtdggtkd syygqnyhgi dtgtadvdvd mkltgayalg
     1021 kygysenval gvtvggnkse aklpmskvkg nsgyigafae nyrgnltlka gagiqyseyd
     1081 anratlgghs ysdkysdmty diylngrysh nignnlflep ygtlsytyik qdsadegnkv
     1141 laietdsksf dytaakvgvd ikkviphekg kstlsagvsy trlltgadee nitgrfkggs
     1201 dfdilvahkn eqsiglnaky alelengilf dvkgsysler dshngtgknr nkgewiigag
     1261 lgykf
//
LOCUS       WP_235239758             529 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Paenibacillus alkaliterrae].
ACCESSION   WP_235239758
VERSION     WP_235239758.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13751.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..529
                     /product="transposase"
                     /calculated_mol_wt=60148
     Region          <80..125
                     /region_name="DUF772"
                     /note="Transposase domain (DUF772); pfam05598"
                     /db_xref="CDD:461687"
     Region          403..518
                     /region_name="DDE_Tnp_1_6"
                     /note="Transposase DDE domain; pfam13751"
                     /db_xref="CDD:433453"
ORIGIN      
        1 mfkygrkeqq itmdspimql pkslveslek gwagsfyanv flsvnedrfp pmysqiysrp
       61 nrpvnilisl lllkelhglt deqliaslyf dyrfqyalgi sdiesegici ntltnfrmrl
      121 lqyeakhqed lfeqemkals dklaelvgmn ksmarmdsfm vssackklsr lelvyrvvta
      181 miealhkqdk glvpeafqdf lkegyrntll yhtrseeags klehlidqas elynhvnrlr
      241 dfhgttayqq ltrllreqci eteegvriai egaklkpdgl qnpsdssaty rnkggkghig
      301 yvtnivevrd vekdlglild fdvqpnihsd aafgeafvqk splaedievl avdgayyree
      361 tvkaaeskni emnfsnmtgr kaavdhipvt qfevndeqii tacpaghapl rssyneekqv
      421 ykatfdkgvc qtcpmlstcp vqqqvknntv rftetkrqsd atrikhgter hrelsrfrag
      481 vegmvsairr rfdvdnlpvf gllrskmwis akigafnfss vfkyqtrmg
//
LOCUS       WP_235239416             293 aa            linear   BCT 02-MAR-2025
DEFINITION  cell wall hydrolase [Paenibacillus alkaliterrae].
ACCESSION   WP_235239416
VERSION     WP_235239416.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 293)
  AUTHORS   Boland,F.M., Atrih,A., Chirakkal,H., Foster,S.J. and Moir,A.
  TITLE     Complete spore-cortex hydrolysis during germination of Bacillus
            subtilis 168 requires SleB and YpeB
  JOURNAL   Microbiology (Reading) 146 (Pt 1), 57-64 (2000)
   PUBMED   10658652
REFERENCE   2  (residues 1 to 293)
  AUTHORS   Ishikawa,S., Yamane,K. and Sekiguchi,J.
  TITLE     Regulation and characterization of a newly deduced cell wall
            hydrolase gene (cwlJ) which affects germination of Bacillus
            subtilis spores
  JOURNAL   J Bacteriol 180 (6), 1375-1380 (1998)
   PUBMED   9515903
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019128.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07486.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..293
                     /product="cell wall hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=32168
     Region          47..144
                     /region_name="Cu_amine_oxidN1"
                     /note="Copper amine oxidase N-terminal domain; pfam07833"
                     /db_xref="CDD:400265"
     Region          165..293
                     /region_name="CwlJ"
                     /note="Cell wall hydrolase CwlJ, involved in spore
                     germination [Cell cycle control, cell division, chromosome
                     partitioning, Cell wall/membrane/envelope biogenesis];
                     COG3773"
                     /db_xref="CDD:442987"
ORIGIN      
        1 mekffkrlla tciagillmp tglyaagapg ttiyvdgspv ktstmmqndr qmvpaaffrs
       61 mkasvswsek yrsavisrss mtigfpsgas fadyglrqse qwrrdelptt tindsgriyv
      121 playtarklg lnvhydarsk rtsisstgqn gihslsaags taglgpvsqe dlkwlyqvte
      181 aeaggesykg ktavaasiln rvkspewpkt iqetifqvth yngksyyqys pvldkriyev
      241 mpseetkkav qaalngedps egaivfynpd ktdnqwvrsk evtviignhv fak
//
LOCUS       WP_235239761            1613 aa            linear   BCT 02-MAR-2025
DEFINITION  GH32 C-terminal domain-containing protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235239761
VERSION     WP_235239761.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 1613)
  AUTHORS   Alberto,F., Bignon,C., Sulzenbacher,G., Henrissat,B. and Czjzek,M.
  TITLE     The three-dimensional structure of invertase (beta-fructosidase)
            from Thermotoga maritima reveals a bimodular arrangement and an
            evolutionary relationship between retaining and inverting
            glycosidases
  JOURNAL   J Biol Chem 279 (18), 18903-18910 (2004)
   PUBMED   14973124
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019849.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08244.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1613
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..1613
                     /product="GH32 C-terminal domain-containing protein"
                     /calculated_mol_wt=172742
     Region          521..1000
                     /region_name="SacC"
                     /note="Sucrose-6-phosphate hydrolase SacC, GH32 family
                     [Carbohydrate transport and metabolism]; COG1621"
                     /db_xref="CDD:441228"
     Region          <958..>1095
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          1270..1398
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cd00161"
                     /db_xref="CDD:467293"
     Site            order(1283..1285,1294,1296,1303..1304)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(1328..1329,1339,1341,1348..1349)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(1373..1375,1386,1388,1395..1396)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
ORIGIN      
        1 mslnklwval lsvvliwsll lpaspgdray aadtakvmqg yiplsgswtp egraavsgss
       61 gsdanaflms tttagtnfvy eaevtvnsas pydvgslvfr anaegtegyv vnldpnmdrv
      121 rlfdwatnsd vgqpyttaie pgvayhvkia adgsnlriyi nnqlvidaqs tsyiggnvgl
      181 hiyngnvqfs gvdiqetntn lsgwttsggq wtttsqgwea iapenenaya mastvaddft
      241 yeanvlirdq yavatllfrs nangsqayal qidpnagrir lmdtngdrel gvstaelvig
      301 niyhvrirae qssikvywgs gyapkisvad htytsgqagl qvcngaavfq nilaagfrtn
      361 ltgwsatggt wtphleglka vspgsgaayr vssgpasdfv legdvtiadg ggkagllfrs
      421 nsngtagyiv eldaaasrir lakagdgtel gsaaftvqag ksyhlevaan gsdidvfadg
      481 yaspvlsvqn gevlsgtvgl gvtngaayfq nvyvterpdy yaelyrpqyh ftqaggwasd
      541 pnglvyfqge yhlfhqdggq wahvvstdlv hwkllpiaik wnemghawsg saaadtenks
      601 glfngvqggg liayytsfnp dkwngnqkig vayssdkgrt wefhdgnpii eniggagagw
      661 dfrdpkvvwd eehnqwvmvv sggdhirffk stnlldwtai dsfgygayvh nggvwecpdf
      721 fplyvdgekk wvllfstgar aetngsdsey figsfdgqrf tsdnpaetvl ryesgrdmya
      781 amtfadmpdg rrveigwmsn wdypfsfpts pwkgqmsvpr elklkkndng dvrlvqkpvv
      841 eletlrgaad swsnetvtps sgnllaglsg tayeivadle lpaqhaatef gftvrelggq
      901 ktivgyqqga aslfvdrsea grndftelfr peqaasltpd ennriqmrif vdkssvevfg
      961 ndgeavissl ifpgaardgm sfyakdgnvk vvslnvypls niwrdemagg qspakvvmdl
     1021 gklelgvgqt hrlyasvrpy tannkellws ssntavaavs aadsrgasvt avgegravit
     1081 aatqdggivg etvvtagefh tnlsgwkaas kgqwlttsdg iagmfdkdth ymsadsarnf
     1141 ayeadvkldp aggaasmlfr anadgssgyy fnidpnmksl rlfykddgsf hddqllakvp
     1201 afvmpgktyn vkivangssi kiyfddsaep vidvndvtfs rgyfglnafg grayyqnvfa
     1261 ligepkqepv ykivnpgsgk vleadhasng ahvkirtdsg adsqkwyvep nedgsytirg
     1321 avsgkvlnas gsddgshvqi lrnfgydnqr wtmpanedgt lafvaansgk aldivnggte
     1381 dgtavqmwer ndfeaqkwtl veiappaegg dgipgegtgg dsgdtpsqgt sdngkiiahi
     1441 dgievtfavg kteqtaggal tkitvdankl kqllgkgssh kltihvpeeg dvrldglsvp
     1501 dlmllskkgs sltvhteygi fpiqgskdwn ktikpfgdea vladikvsas ivkaseqerk
     1561 laaataakgg yhllvdpisv tlqlsfggrt idivgnrsen gqichaasrl gcr
//
LOCUS       WP_235239452             120 aa            linear   BCT 02-MAR-2025
DEFINITION  RusA family crossover junction endodeoxyribonuclease [Escherichia
            coli].
ACCESSION   WP_235239452
VERSION     WP_235239452.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 120)
  AUTHORS   Mahdi,A.A., Sharples,G.J., Mandal,T.N. and Lloyd,R.G.
  TITLE     Holliday junction resolvases encoded by homologous rusA genes in
            Escherichia coli K-12 and phage 82
  JOURNAL   J Mol Biol 257 (3), 561-573 (1996)
   PUBMED   8648624
REFERENCE   2  (residues 1 to 120)
  AUTHORS   Sharples,G.J., Chan,S.N., Mahdi,A.A., Whitby,M.C. and Lloyd,R.G.
  TITLE     Processing of intermediates in recombination and DNA repair:
            identification of a new endonuclease that specifically cleaves
            Holliday junctions
  JOURNAL   EMBO J 13 (24), 6133-6142 (1994)
   PUBMED   7813450
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017663.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05866.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..120
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /EC_number="3.1.21.10"
                     /GO_function="GO:0000287 - magnesium ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006281 - DNA repair [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /calculated_mol_wt=14016
     Region          1..118
                     /region_name="RusA"
                     /note="Endodeoxyribonuclease RusA; cl01885"
                     /db_xref="CDD:470382"
ORIGIN      
        1 mneyefvlpw pptvntywrr rgsqyyisdk gqkyrkdvqq iirqlrldif tksrlritii
       61 aeppdsrrrd ldnilkglld slihagfadd deqfddirvi rgvkvlggrv gikiteleni
//
LOCUS       WP_235239868             805 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-L-arabinofuranosidase C-terminal domain-containing protein
            [Paenibacillus alkaliterrae].
ACCESSION   WP_235239868
VERSION     WP_235239868.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 805)
  AUTHORS   Gilead,S. and Shoham,Y.
  TITLE     Purification and characterization of alpha-L-arabinofuranosidase
            from Bacillus stearothermophilus T-6
  JOURNAL   Appl Environ Microbiol 61 (1), 170-174 (1995)
   PUBMED   7887599
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018647.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06964.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..805
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..805
                     /product="alpha-L-arabinofuranosidase C-terminal
                     domain-containing protein"
                     /GO_function="GO:0046556 - alpha-L-arabinofuranosidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0046373 - L-arabinose metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=90952
     Region          39..187
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; pfam02018"
                     /db_xref="CDD:396553"
     Region          207..>523
                     /region_name="AbfA"
                     /note="Alpha-L-arabinofuranosidase [Carbohydrate transport
                     and metabolism]; COG3534"
                     /db_xref="CDD:442755"
     Region          441..>544
                     /region_name="Alpha-L-AF_C"
                     /note="Alpha-L-arabinofuranosidase C-terminal domain;
                     pfam06964"
                     /db_xref="CDD:462053"
ORIGIN      
        1 mnergtlkvf tqergaelgd lfgiffedln haadgglyae lvqnrsfefd pidhsdyhal
       61 tawgkvergk gsaeltvees apfsernkhy avieilsegd gvgilnqgfn sgipvkegea
      121 ymfsfyarrd ssfdvpvria vegldgivha aaeiavcsde wtkyeavmta katdyssrlv
      181 ivtkgsgkly ldmvslfpak tfrdrpngmr ediaamiael kpkfmrfpgg clvhdgslna
      241 dernsmyrwk ntigdieqrp arrnnwrynq tlglgyyeyf lfcedigakp ipiltagydp
      301 hhkrivplde lqpwiddald liefacgdss tewggiragl ghpepfgley igigneevge
      361 pfferyayfh raikekypai kiinssgpfa aggeyergwn sarenrsdlv dehyyqspew
      421 flanynrydh fkvdepkvfl geyaswgnty ynalveaafm tgleknahav glacyapmlc
      481 nvdyvnwkpd miwfnnhevy gtvnyyvqql fmhhqgdhll kieargferp haepaasitg
      541 kltlctdlcs iqfrdvrlin detgeikcfe glpevlsdmq edrlngtakr smelgetdwd
      601 sytlrfkakk isgpkgfdvc fgksddknql iwevggwqnq dsmvvskvdg rgscltqslf
      661 tvetgieydf alevsgrrir tyvdgvlind tedklpviea vyysassdrs tgdvivkvvn
      721 vqeqsaagqv vledlpktps mvevielsgy gldeendfes pkrivpkrke lhpeansffy
      781 dfpghsvtif rvkkvlkqdr grrnh
//
LOCUS       WP_235239907              78 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6953 family protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235239907
VERSION     WP_235239907.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047140.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22266.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..78
                     /product="DUF6953 family protein"
                     /calculated_mol_wt=8903
     Region          3..>70
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mshtadevae wmlhevkdkg ilhqaaaveh ikshfgesfi yvnehgnasi dkevkkafrk
       61 lhrgkaawer dgffwgws
//
LOCUS       WP_235239956             540 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Paenibacillus alkaliterrae].
ACCESSION   WP_235239956
VERSION     WP_235239956.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 540)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..540
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=62748
     Region          4..124
                     /region_name="REC_YesN-like"
                     /note="phosphoacceptor receiver (REC) domain of YesN and
                     related helix-turn-helix containing response regulators;
                     cd17536"
                     /db_xref="CDD:381091"
     Site            order(9..12,15..17,20,106..107)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381091"
     Region          288..540
                     /region_name="AraC"
                     /note="AraC-type DNA-binding domain and AraC-containing
                     proteins [Transcription]; COG2207"
                     /db_xref="CDD:441809"
     Region          453..536
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
ORIGIN      
        1 mtqllivdde ahvvdrfstt idwkaigveq vfkaysglea lallrqfsid ivitdikmpg
       61 msglqliaei rrlwpktkci llsgysdfny akkailyqte dyllkpvkee ellaavervl
      121 akleleweev vsnqrltytf kenlpllran lllellqgrr wettalhdkm kmlelsdhew
      181 qfcslmvvrl delflqydlr dlswkdyaig nmveelfggr yaiwyakdah dylvfamtak
      241 reaagendtv wfertaaalq tavgtylkgk isvmvchdgr fpydlaslys rsigafrkri
      301 gserelfmrl eddrseegig slkslyeppa lihlleaarw sdiaeklrli fddmdmedtr
      361 pgsqehllei yftiasaysy iahkngrhls ellgneygkm teglpfrsvn qlrewslrtl
      421 hriredmdre tkdsrmalir eiqafieqnv qqdvslqsia dhvylhpvyv skvykletge
      481 nlsdyaqrvr mnkaeyllkh sadkiyeiaa slgyqrphsf nhafkkkfgm tpqeyrdrfs
//
LOCUS       WP_235240013             236 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1961 family protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235240013
VERSION     WP_235240013.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020785.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09224.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..236
                     /product="DUF1961 family protein"
                     /calculated_mol_wt=26698
     Region          7..220
                     /region_name="DUF1961"
                     /note="Domain of unknown function (DUF1961); pfam09224"
                     /db_xref="CDD:401242"
ORIGIN      
        1 miapewslly hntlgtfeev qhfrmegeas isfpmgrlrl ksvrdaeegq kanfvwwcpe
       61 dfpadiavtw efrpiqepgl ailffaakga ggvdlfdtal aprtgeyeqy hhgeldalhl
      121 syyrrrwpee rqfhtcnlrk sygfhlvaqg adplppvadi tgfyrmklik rgaridfsin
      181 elpvlswedd gitfgqplga gkigfrqmap fvaeyanlkv yelmeageag vlekpv
//
LOCUS       WP_235240075             301 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2232 domain-containing protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235240075
VERSION     WP_235240075.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021506.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09991.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..301
                     /product="DUF2232 domain-containing protein"
                     /calculated_mol_wt=33610
     Region          36..300
                     /region_name="DUF2232"
                     /note="Predicted membrane protein (DUF2232); cl01728"
                     /db_xref="CDD:470315"
ORIGIN      
        1 mntglkpvlw sfaallllls lvvpllnvis llllmvpyvv lyttlppklf vlhlvpvwvi
       61 affaggpatl iiglfflips iimghlymkq apasrvirtv gvvflaqlml ellifevfld
      121 isliremstm vrdtmdnmla qgvlpkewns eftdavvrmm inslpmtfim iaagytiitq
      181 yiarravkws ggpdvpsfmp arewrlprvl vviylivyvi elfssttset ffavavmnlv
      241 pllsfvfafq avgfffflah qrgwnqavpv liaipvlifp plsligvldt afpirksftk
      301 p
//
LOCUS       WP_235240085             249 aa            linear   BCT 02-MAR-2025
DEFINITION  two-component system regulatory protein YycI [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235240085
VERSION     WP_235240085.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 249)
  AUTHORS   Szurmant,H., Mohan,M.A., Imus,P.M. and Hoch,J.A.
  TITLE     YycH and YycI interact to regulate the essential YycFG
            two-component system in Bacillus subtilis
  JOURNAL   J Bacteriol 189 (8), 3280-3289 (2007)
   PUBMED   17307850
REFERENCE   2  (residues 1 to 249)
  AUTHORS   Santelli,E., Liddington,R.C., Mohan,M.A., Hoch,J.A. and Szurmant,H.
  TITLE     The crystal structure of Bacillus subtilis YycI reveals a common
            fold for two members of an unusual class of sensor histidine kinase
            regulatory proteins
  JOURNAL   J Bacteriol 189 (8), 3290-3295 (2007)
   PUBMED   17307848
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021186.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09648.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     gene            1..249
                     /gene="yycI"
     Protein         1..249
                     /product="two-component system regulatory protein YycI"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=27756
     Region          1..236
                     /region_name="YycI"
                     /note="YycI protein; cl02015"
                     /db_xref="CDD:470434"
ORIGIN      
        1 mdwgraknvl imsflllnil lgyqlwldir eqlnvnvnta elpqdkvllm qqkrislean
       61 lpletpklgd ltyllhsesr nnaepitldt pvdskiiftk selvkalgdr ipeldnyayd
      121 slnssvdvfv lhrvveghpm fdvrlmlyis nqkitafqqd rvellgsgea kqvlpatkvv
      181 aslietylpd gavitdiqlg yhgqifdsek qvslpswrvl lengppyyvh aisgevatde
      241 vnekaaang
//
LOCUS       WP_235240179             281 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235240179
VERSION     WP_235240179.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 281)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 281)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 281)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 281)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..281
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=31194
     Region          1..281
                     /region_name="PhnK"
                     /note="ABC-type phosphonate transport system, ATPase
                     component PhnK [Inorganic ion transport and metabolism];
                     COG4107"
                     /db_xref="CDD:443283"
ORIGIN      
        1 mndfespils vknlnkqyga gcghcrtgde erlmknycpk cgtvyacrhi sfdlypgevf
       61 givgesgsgk stlmqclyfd qdvtggeayi rtykngevnl fgessqqkrh irnhqmgkvy
      121 qnpvlglrmg fssigniaek liaagsrnvg amegrgrtll ehvnipvrrm keppknfsgg
      181 mqqrvqiaka lsnnppilll devttgldls vqasvldlik klqrqlnisi iivshdlgvi
      241 rmladrtmvm ldgrvieygl tdqiledpqh rytqqlvhsl l
//
LOCUS       WP_235240247             216 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Paenibacillus alkaliterrae].
ACCESSION   WP_235240247
VERSION     WP_235240247.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 216)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..216
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=24235
     Region          4..119
                     /region_name="REC_NarL-like"
                     /note="phosphoacceptor receiver (REC) domain of NarL
                     (Nitrate/Nitrite response regulator L) family response
                     regulators; cd17535"
                     /db_xref="CDD:381090"
     Region          141..214
                     /region_name="GerE"
                     /note="Spore transcriptional regulator GerE (stand-alone
                     HTH domain) [Cell cycle control, cell division, chromosome
                     partitioning, Transcription]; COG5905"
                     /db_xref="CDD:444607"
ORIGIN      
        1 mirillvddh psvgegtktm ieqdsemtvs vvlsaieald ivqmqpfdli lcdlnmpgis
       61 gleltkrliq qdperkviiy sgyeigshfn lliesgvsgf isktvsreql hnaircamrg
      121 davipisllk qlrrhevtig rsevsvedvs itekeqtilh evstgisnke lavmlhvsqr
      181 nveyqlsrif dklnvrsrse aireaqrlgl irleqy
//
LOCUS       WP_235240260             539 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235240260
VERSION     WP_235240260.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..539
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=61161
     Region          4..105
                     /region_name="REC_YesN-like"
                     /note="phosphoacceptor receiver (REC) domain of YesN and
                     related helix-turn-helix containing response regulators;
                     cd17536"
                     /db_xref="CDD:381091"
     Site            order(9..12,15..17,20)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381091"
     Region          284..538
                     /region_name="AraC"
                     /note="AraC-type DNA-binding domain and AraC-containing
                     proteins [Transcription]; COG2207"
                     /db_xref="CDD:441809"
     Region          450..533
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
ORIGIN      
        1 mykvmlvddd ypvlelihya idwealglrv iglhengasa leaamkempd ilitdigmpk
       61 mdglelikrm kelkpdiraa ilschsefqy aqqavklqvq dyllkdtlep taihkllvqf
      121 igglkeenel qtkqlqmehl vdrnkalmke kfirsiihqp lldsdkwrke llsfglpfqs
      181 geiiipvigi vddyrlakhr ylsddvlrfa vdnvveeair adgmlsvhfn ynpqesvllq
      241 tfpaglkvng ydevrgmmss iqravkqslk lsmsfmigds cttpeqikas itairansig
      301 rfyrsfgsit rsipcsageg dmfdgfnqas eqlrelllgr dgggvratvm nwlakaeqer
      361 yppemvkdwi lkllldaklk lqsilhyrsa qwidinhsel leidshaelt ewlighcvsa
      421 iaaadqtggq srrtevaeac qfvslhldrk isleevaeql fmnpsyfsrl fkketgetfi
      481 eyvtrmkmhr akelldqtda pvgkicgtlg ydnqsyfikl fksfsgvtpv eyrsqqkrv
//
LOCUS       WP_235240274             466 aa            linear   BCT 02-MAR-2025
DEFINITION  ThiF family adenylyltransferase [Paenibacillus alkaliterrae].
ACCESSION   WP_235240274
VERSION     WP_235240274.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 466)
  AUTHORS   Lee,I. and Schindelin,H.
  TITLE     Structural insights into E1-catalyzed ubiquitin activation and
            transfer to conjugating enzymes
  JOURNAL   Cell 134 (2), 268-278 (2008)
   PUBMED   18662542
REFERENCE   2  (residues 1 to 466)
  AUTHORS   Lois,L.M. and Lima,C.D.
  TITLE     Structures of the SUMO E1 provide mechanistic insights into SUMO
            activation and E2 recruitment to E1
  JOURNAL   EMBO J 24 (3), 439-451 (2005)
   PUBMED   15660128
REFERENCE   3  (residues 1 to 466)
  AUTHORS   Lake,M.W., Wuebbens,M.M., Rajagopalan,K.V. and Schindelin,H.
  TITLE     Mechanism of ubiquitin activation revealed by the structure of a
            bacterial MoeB-MoaD complex
  JOURNAL   Nature 414 (6861), 325-329 (2001)
   PUBMED   11713534
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013094.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00899.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..466
                     /product="ThiF family adenylyltransferase"
                     /GO_function="GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /calculated_mol_wt=50716
     Region          12..108
                     /region_name="Prok-JAB"
                     /note="Prokaryotic homologs of the JAB domain; pfam14464"
                     /db_xref="CDD:464179"
     Region          181..>316
                     /region_name="ThiF"
                     /note="Molybdopterin or thiamine biosynthesis
                     adenylyltransferase [Coenzyme transport and metabolism];
                     COG0476"
                     /db_xref="CDD:440244"
ORIGIN      
        1 mttklrmsgr dhaalsrhlf pgdnkeaval alcgahsses gviitvhkiy pvpysicere
       61 edriqwpadf avnllneaas kqmrilkihs hpygypefss tdddsdyaff rtasewldne
      121 npgvsaimfp dlsiraravn gegrfsdves vlvagsdimf wkqqgseghi qgyaertaqt
      181 fgegtirmls elsigvvgvs gtgspvvell yrtgvgelvl vdgdiieern lnrifnssmr
      241 dageqkakvf vaedaikrsg lptkvvpind tlfnpdvvkr laqcdvifgc ldsvegrsll
      301 nslstyycip yfdlgiglka dgmggisqas gnahylqpgg ssllsrkvvv qerlaaeslk
      361 rtnpaeyerr rgegyiagvn enspavisin tliaavavnd flarihpyrs fkndelavis
      421 mdlvngrmis dtpdgepcpf ysrfvgrgdi spllgnpgls regiiv
//
LOCUS       WP_235240279             309 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3800 domain-containing protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235240279
VERSION     WP_235240279.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12686.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..309
                     /product="DUF3800 domain-containing protein"
                     /calculated_mol_wt=36306
ORIGIN      
        1 mkiftdesgd fslknstsps mvaslicted myegikrfmn tmekryngga eikgsdltfe
       61 qrlrvceflk knrdhlkatm tivlpsvvth edlnlfrtnq aetfqknkew yinaggkvqk
      121 vleeydriak lamyqsrlsd eeflqalllt qqmervikfc ivyfmerkhr rnfkdfiflf
      181 drklpnklsa mekyilnyvk afldgkskmg mtipipnvwk tghpfidrym itmedgreaf
      241 flnellknfe fedskndpgl rmvdiisnti yqhilnpnnl eiaqcyntlq yalgyqnkms
      301 qfhiilkkv
//
LOCUS       WP_235240309             380 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235240309
VERSION     WP_235240309.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 380)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 380)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02771.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..380
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=41047
     Region          8..380
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(93,123,125,156,158,362..364,366,368)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 melrytkeqe ellravrhfa eteiapqvha meredefpsr llkrmaqlgl mglpiptkwg
       61 gagsdfiayt iavneiskvs atlgvilsvh tsvgtfpiih ygteeqrmky vrrlasgesl
      121 gafaltetha gsdaasirtt aslsgdhyil ngtkmfitna gaadiyiafa vtdyskgagg
      181 itafiiesgt eglrvgrkek kmglhgsntc elhfdqikip vsqrlgaegd gfaiakgsld
      241 ggrigigaqa lgiaeaalql ihcrwnpyra kgshtpgklk pehaeladlt akveaarllv
      301 yraaylrqeg lsctkeasma kmfasdtave vtgaavrlyg lqgclkelpa erlfrdakvt
      361 qiyegtneih rivisnqllk
//
LOCUS       WP_235240283             419 aa            linear   BCT 02-MAR-2025
DEFINITION  Mu transposase C-terminal domain-containing protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235240283
VERSION     WP_235240283.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 419)
  AUTHORS   Rice,P. and Mizuuchi,K.
  TITLE     Structure of the bacteriophage Mu transposase core: a common
            structural motif for DNA transposition and retroviral integration
  JOURNAL   Cell 82 (2), 209-220 (1995)
   PUBMED   7628012
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020859.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09299.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..419
                     /product="Mu transposase C-terminal domain-containing
                     protein"
                     /calculated_mol_wt=47962
     Region          12..314
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
     Region          331..379
                     /region_name="Mu-transpos_C"
                     /note="Mu transposase, C-terminal; pfam09299"
                     /db_xref="CDD:430512"
ORIGIN      
        1 mdegmrekia lfrygliapl lngqvdraay laevsakkhd vpcygekmya aktilewllf
       61 yrrkgfdglk pgtrsdrgks rtmspdqqdh vlalrkqhae mpvtvfydyl vakgeilpgr
      121 vsystihrfl nlhgllsgea tqgterkrfa hdkvnmlwqt dmsegprlri dgklvrthli
      181 afiddcsrlv pfaqfvptek fdglrivmke alirrgipkl lytdngkifr sdilqlacag
      241 lgiqllhtra ydpqskgkie rmfltcktrf ytllqaepas sieelnerfw kwleedyhrr
      301 phaslegkmp levylsqieq vrtvsdlaml dtlflrrakr tvkhdatfsl enrlyevpet
      361 fagqkvevry dendvhvyve gkpaaqakiv rfadnahvkr erpalsfkal qesggaadv
//
LOCUS       WP_235240417             208 aa            linear   BCT 02-MAR-2025
DEFINITION  stage II sporulation protein M [Paenibacillus alkaliterrae].
ACCESSION   WP_235240417
VERSION     WP_235240417.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 208)
  AUTHORS   Chastanet,A. and Losick,R.
  TITLE     Engulfment during sporulation in Bacillus subtilis is governed by a
            multi-protein complex containing tandemly acting autolysins
  JOURNAL   Mol Microbiol 64 (1), 139-152 (2007)
   PUBMED   17376078
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014052.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01944.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..208
                     /product="stage II sporulation protein M"
                     /calculated_mol_wt=22832
     Region          <2..208
                     /region_name="SpoIIM"
                     /note="Stage II sporulation protein M; cl00572"
                     /db_xref="CDD:469827"
ORIGIN      
        1 mfkwrsiidh fkqmkgyiaf gfilffagmv iggtnpafrd fltsqieglr elsnmidqsn
       61 nptltmmivi flnnaiksif vmylgamfgi lpllflvvng mvvgyllkhv aeqqgggvvl
      121 elifkgllph giieipaiii acayglrfgv lafkglgivl farakapgig remeffvirt
      181 vpvmiiltis llvasiiest ittwllsl
//
LOCUS       WP_235240201             378 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA sulfur modification protein DndB [Paenibacillus alkaliterrae].
ACCESSION   WP_235240201
VERSION     WP_235240201.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 378)
  AUTHORS   Liang,J., Wang,Z., He,X., Li,J., Zhou,X. and Deng,Z.
  TITLE     DNA modification by sulfur: analysis of the sequence recognition
            specificity surrounding the modification sites
  JOURNAL   Nucleic Acids Res 35 (9), 2944-2954 (2007)
   PUBMED   17439960
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025438.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14072.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..378
                     /product="DNA sulfur modification protein DndB"
                     /calculated_mol_wt=44043
     Region          49..287
                     /region_name="dndB_like"
                     /note="DNA-sulfur modification-associated domain; cd16414"
                     /db_xref="CDD:319271"
ORIGIN      
        1 mepvqslsdl ftnhrstshv eiggslsrtf gqstfittlp igkliglyev dlevqrniip
       61 qnlsklidyi llnldhgqsi yfpgiilsar gageydlesl tyrmspmekc yvvdgqhrla
      121 afrrvietlq snmarakdrr eyermeeits klrrvydfpm svmiyldida kqerqlfsdi
      181 nklprkiggn ltalrdqrrf yhvlasrlve qasvmkalpv drftergkgp eylfsyhlvi
      241 eilsalfegr lksaarnngy yfadsvveeh laqasfyfer llhylpepsk delcwsenlq
      301 ialalffhee aykslqfnky nieyamkilq hidwkaiyqg dekdrlprrs rimkaynfvr
      361 effkeqnvll ivdkedvg
//
LOCUS       WP_235240433             387 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Paenibacillus alkaliterrae].
ACCESSION   WP_235240433
VERSION     WP_235240433.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 387)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 387)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..387
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=42191
     Region          2..380
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(27..30,32..33,44,46,72..73,75..76,98,103,106,194,
                     202,204,221,231,233..234,312)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:99738"
     Site            order(73..75,98,141,170,192,194..195,204)
                     /site_type="active"
                     /note="substrate-cofactor binding pocket [active]"
                     /db_xref="CDD:99738"
     Site            order(73..75,98,170,173,192,194..195)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:99738"
     Site            195
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99738"
ORIGIN      
        1 mkieshlaqi gsikepvtga vsfpvyqata frhpklgqst gfdyartksp trsvleeaaa
       61 qleggdaafa cssgmaalqt iftlfsqgdh livsldlygg tyrllerims rfgvtasyvd
      121 tndidamtsl ltpstkavli etptnplmmi tdlervsawa kskglltivd ntlltpffqr
      181 pielgadiii hsatkylggh ndvlaglivt kgkelsaeia flhnsigavl gpqdcwllmr
      241 gmktlalrme rhqynataia nylyeheave dvyypalphh pghdiqnkqs sgntgifsfr
      301 lkdaryvepi lrhikliafa eslggveslm typavqthad ipleirqaig vddrllrfsv
      361 giehaddlia dleqalaaak reigegq
//
LOCUS       WP_235240457             125 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase [Paenibacillus alkaliterrae].
ACCESSION   WP_235240457
VERSION     WP_235240457.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 125)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..125
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /calculated_mol_wt=13623
     Region          <19..107
                     /region_name="TopA"
                     /note="DNA topoisomerase IA [Replication, recombination
                     and repair]; COG0550"
                     /db_xref="CDD:440316"
ORIGIN      
        1 mdsdgngsgq gkadrqpaql lppltlgqml pvkqakvrel rtlpparyte atlltqmkkh
       61 slgtpatrad iiekllgtdt mtrsqnrlmp tgkgkqlvel vvnaisrwkf atekransrn
      121 asram
//
LOCUS       WP_235240517             242 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar phosphate nucleotidyltransferase [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235240517
VERSION     WP_235240517.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 242)
  AUTHORS   Jensen,S.O. and Reeves,P.R.
  TITLE     Domain organisation in phosphomannose isomerases (types I and II)
  JOURNAL   Biochim Biophys Acta 1382 (1), 5-7 (1998)
   PUBMED   9507048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012695.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00483.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..242
                     /product="sugar phosphate nucleotidyltransferase"
                     /GO_function="GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=26682
     Region          1..236
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
     Site            order(6,8,52,107,109)
                     /site_type="active"
                     /db_xref="CDD:133019"
ORIGIN      
        1 mkgvvlaggt gtrlhpltki fnkhllpvgk ypminysiqk lrdagitdil litnkqslgw
       61 faeylggged wgvnitykiq neaggiaqav slaegfihpn ekfavilgdn lfqdsikhiv
      121 eqfqlqeqga kvllkevhdp rrygvpileg tvitaieekp ehpsstyavt giylfdaavf
      181 eiiktqkpsk rgeleitdvn nvyaaagmlk hefltgwwid agthesllha alflskedek
      241 cl
//
LOCUS       WP_235240523             567 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Paenibacillus alkaliterrae].
ACCESSION   WP_235240523
VERSION     WP_235240523.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..567
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=63637
     Region          <70..346
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mllviarelq pyfevvlvvp negvlstear hfgvvtvved ystlhelyqp vpdveelfqn
       61 laadpkstsl lnllhihrpd limtntcvnv lpavagkmlg ipvawiiaev iqenqwtsls
      121 vdiihrysdw lvgishaalk sfnspdmesk kivlppswsm velapetwqa hrimkrtqlg
      181 lndshtvigy issdiyankg lkhfvemavt lcpefpearf mvigkavdpd ffascmniie
      241 qngytsrvfi lpfeqnivsl ypamdivvvp slwnegfglt aleglvfgkp vvayrsggli
      301 eiltstgngp flaeqgnvad ltmkvkslvq dsalrmqvge rssraaqevf gigafrerln
      361 qflprvipvi eakksshqvt qlkypngsvi kgnastlvfl lengvkrhiv neevfqfyrw
      421 kwdqvmgfpd velqafptgr pisrnkplrl hapshfvakg sgpaiyimhn girhpfssea
      481 vfrkhhhydq ivaltdlele eytlgtpiaa sgkapsikrr kgakhigrlr nkrikhkgkl
      541 tikkrstrtr irkllprkmk askrvrr
//
LOCUS       WP_235240555             165 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Paenibacillus alkaliterrae].
ACCESSION   WP_235240555
VERSION     WP_235240555.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 165)
  AUTHORS   Mullin,D.A., Zies,D.L., Mullin,A.H., Caballera,N. and Ely,B.
  TITLE     Genetic organization and transposition properties of IS511
  JOURNAL   Mol Gen Genet 254 (4), 456-463 (1997)
   PUBMED   9180700
REFERENCE   2  (residues 1 to 165)
  AUTHORS   Fischer,J., Maier,H., Viell,P. and Altenbuchner,J.
  TITLE     The use of an improved transposon mutagenesis system for DNA
            sequencing leads to the characterization of a new insertion
            sequence of Streptomyces lividans 66
  JOURNAL   Gene 180 (1-2), 81-89 (1996)
   PUBMED   8973350
REFERENCE   3  (residues 1 to 165)
  AUTHORS   Zekri,S. and Toro,N.
  TITLE     Identification and nucleotide sequence of Rhizobium meliloti
            insertion sequence ISRm6, a small transposable element that belongs
            to the IS3 family
  JOURNAL   Gene 175 (1-2), 43-48 (1996)
   PUBMED   8917074
  REMARK    Erratum:[Gene 1997 Mar 25;188(1):149]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01527.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..165
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=18330
     Region          13..>49
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 mnqvnkelkq silqrmmppn nelvsqiare sglseatlyk wkkaakaqgm impdgaqpae
       61 rwstrdkfai vvetaalsei elseycrarg lfveqvkawr dacmqanggi aaqasklqkd
      121 lrtkeqevka lsrelqrkes alaetaallv lrkkaqaiwg dqgde
//
LOCUS       WP_235240558             449 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235240558
VERSION     WP_235240558.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025124.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13749.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..449
                     /product="ATP-binding protein"
                     /calculated_mol_wt=51928
     Region          <4..55
                     /region_name="transpos_IS21"
                     /note="IS21 family transposase; NF033546"
                     /db_xref="CDD:468077"
     Region          273..358
                     /region_name="HATPase_c_4"
                     /note="Putative ATP-dependent DNA helicase recG
                     C-terminal; pfam13749"
                     /db_xref="CDD:463975"
ORIGIN      
        1 maalrnrtff hlhelneaiw dlpkrlndkp fqkmegsrss lfqsvdkpal kplptvpytf
       61 arwhiarvni dyhiaidhvl ysvpytlvkr vyyrkgdsti qfagearkal eydkgsrhye
      121 lesvpdcgit dlddtvfqqy keitgysgnl hnlltnrgla vnkdgqlimr aagvllfakm
      181 pticlpqaci rfiryegika ktgtranvik eytiegplik qiertkeiiq sqlrdftalg
      241 qmgifdtvpe ypefawieav vnavthrayn lggleimirm yddrlefesp grlpgmvrls
      301 nikdlrysrn priavmlsef kyvrrwgegi driydemqlf hldppelmet eqtfvltlkn
      361 nievrrlrre stialsigqe kwldlspdqr lalefasirk kvftkdfgdf igrsrvtakl
      421 ileslveeey lervgskptd pklhyilkl
//
LOCUS       WP_235240684             881 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235240684
VERSION     WP_235240684.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 881)
  AUTHORS   van Wolferen,M., Wagner,A., van der Does,C. and Albers,S.V.
  TITLE     The archaeal Ced system imports DNA
  JOURNAL   Proc Natl Acad Sci U S A 113 (9), 2496-2501 (2016)
   PUBMED   26884154
REFERENCE   2  (residues 1 to 881)
  AUTHORS   Rabel,C., Grahn,A.M., Lurz,R. and Lanka,E.
  TITLE     The VirB4 family of proposed traffic nucleoside triphosphatases:
            common motifs in plasmid RP4 TrbE are essential for conjugation and
            phage adsorption
  JOURNAL   J Bacteriol 185 (3), 1045-1058 (2003)
   PUBMED   12533481
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024254.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12846.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..881
                     /product="ATP-binding protein"
                     /calculated_mol_wt=99949
     Region          477..831
                     /region_name="AAA_10"
                     /note="AAA-like domain; pfam12846"
                     /db_xref="CDD:315512"
ORIGIN      
        1 malaaknkvs kvniefpiay fennlifnhd ktvyavyein pfiydhlsdq qqidrlitqt
       61 sflalmtdsf hilwlprthd itahherlke rlhgplknwg kkvintmsey lnenynnvkg
      121 annsdyrayi avylpkndak dlvehvetaa telkklllhp krfidnlagi nepeifehef
      181 qsyqvkehqi fdrlsrkmki krgthatiew likrnfwwgi adptlrsvde dgwnpkkskg
      241 ergglstily dsrqvltlte gdidasnprr ikitqphegv ekqvyhaylt lselpeslem
      301 pgsewlysaa tlpfpvqmsv kvevlearda lkklskkkmd idnqvknihe agatvpidlq
      361 ekqdralyle deykkrknpt fithvtfgly htdlnmlksn iriiqdhyrd fgnihvelpa
      421 gdqwllfndf ipgspryvsd yihrippetl aagmigatqe lgdgvglyig ttgslqrpvy
      481 vdlrhasqin rspsfslhgt lgggksvlln tlgyqnavtg gktlifdpka ershwpetlt
      541 elegqiqvat lsaepedvgk ldpflmltni edakeasmdi lsylasvktn sieytyisqa
      601 vvqvatnsnp ylskcievla eigktrqpaa vvaevlasfq dlsfakllfg ngeqktlnmd
      661 yamnilqvqn lkmpaveklp enyslaekms vatmysigrf mdrfvyydrt iftlaemdea
      721 waiirtqigk emadrvirtg rslngglcia tqnatdmsgd lagnigmkfa frdadtkkvk
      781 dtlsyfgleh tqenmdmvkn lengqclmqd iygrigvltv dvvfqhlfdc fdtrppeavd
      841 edatleeene ysilerfaky heeaaaasee dddfdpedee d
//
LOCUS       WP_235240685             134 aa            linear   BCT 02-MAR-2025
DEFINITION  TcpE family conjugal transfer membrane protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235240685
VERSION     WP_235240685.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 134)
  AUTHORS   Wisniewski,J.A., Teng,W.L., Bannam,T.L. and Rood,J.I.
  TITLE     Two novel membrane proteins, TcpD and TcpE, are essential for
            conjugative transfer of pCW3 in Clostridium perfringens
  JOURNAL   J Bacteriol 197 (4), 774-781 (2015)
   PUBMED   25488300
REFERENCE   2  (residues 1 to 134)
  AUTHORS   Bannam,T.L., Teng,W.L., Bulach,D., Lyras,D. and Rood,J.I.
  TITLE     Functional identification of conjugation and replication regions of
            the tetracycline resistance plasmid pCW3 from Clostridium
            perfringens
  JOURNAL   J Bacteriol 188 (13), 4942-4951 (2006)
   PUBMED   16788202
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024062.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12648.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..134
                     /product="TcpE family conjugal transfer membrane protein"
                     /calculated_mol_wt=15767
     Region          14..105
                     /region_name="TcpE"
                     /note="TcpE family; pfam12648"
                     /db_xref="CDD:432696"
ORIGIN      
        1 msdkpesprv svsnytkiwn ldwviyaleg kklpvpanlr ivgifvvcel vflilgktil
       61 fflppsytvf llpvgatwli akqkldgkap hkwllgmiff wmrnkhlhry rkfehtkryv
      121 ydskvvyrtr rerg
//
LOCUS       WP_235240718             145 aa            linear   BCT 02-MAR-2025
DEFINITION  phage portal protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235240718
VERSION     WP_235240718.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 145)
  AUTHORS   Chaban,Y., Lurz,R., Brasiles,S., Cornilleau,C., Karreman,M.,
            Zinn-Justin,S., Tavares,P. and Orlova,E.V.
  TITLE     Structural rearrangements in the phage head-to-tail interface
            during assembly and infection
  JOURNAL   Proc Natl Acad Sci U S A 112 (22), 7009-7014 (2015)
   PUBMED   25991862
REFERENCE   2  (residues 1 to 145)
  AUTHORS   Lebedev,A.A., Krause,M.H., Isidro,A.L., Vagin,A.A., Orlova,E.V.,
            Turner,J., Dodson,E.J., Tavares,P. and Antson,A.A.
  TITLE     Structural framework for DNA translocation via the viral portal
            protein
  JOURNAL   EMBO J 26 (7), 1984-1994 (2007)
   PUBMED   17363899
REFERENCE   3  (residues 1 to 145)
  AUTHORS   Lurz,R., Orlova,E.V., Gunther,D., Dube,P., Droge,A., Weise,F., van
            Heel,M. and Tavares,P.
  TITLE     Structural organisation of the head-to-tail interface of a
            bacterial virus
  JOURNAL   J Mol Biol 310 (5), 1027-1037 (2001)
   PUBMED   11501993
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016988.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05133.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..145
                     /product="phage portal protein"
                     /calculated_mol_wt=16279
     Region          <12..134
                     /region_name="Phage_prot_Gp6"
                     /note="Phage portal protein, SPP1 Gp6-like; cl19531"
                     /db_xref="CDD:418597"
ORIGIN      
        1 mykhlmmslm disgtpsvam gkvdisnlse vsikllytma nlkamigekh ikegmkqrfn
       61 kfrgllqlqg ttfkddewdt ldivfsyamp qsekdiidnl aklreiqgis iesvlnhspy
      121 ttdvvsemnr lseetvsven vesae
//
LOCUS       WP_235240751              83 aa            linear   BCT 02-MAR-2025
DEFINITION  type II toxin-antitoxin system HicB family antitoxin [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235240751
VERSION     WP_235240751.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 83)
  AUTHORS   Winter,A.J., Williams,C., Isupov,M.N., Crocker,H., Gromova,M.,
            Marsh,P., Wilkinson,O.J., Dillingham,M.S., Harmer,N.J.,
            Titball,R.W. and Crump,M.P.
  TITLE     The molecular basis of protein toxin HicA-dependent binding of the
            protein antitoxin HicB to DNA
  JOURNAL   J Biol Chem 293 (50), 19429-19440 (2018)
   PUBMED   30337369
REFERENCE   2  (residues 1 to 83)
  AUTHORS   Hall,A.M., Gollan,B. and Helaine,S.
  TITLE     Toxin-antitoxin systems: reversible toxicity
  JOURNAL   Curr Opin Microbiol 36, 102-110 (2017)
   PUBMED   28279904
REFERENCE   3  (residues 1 to 83)
  AUTHORS   Bibi-Triki,S., Li de la Sierra-Gallay,I., Lazar,N., Leroy,A., Van
            Tilbeurgh,H., Sebbane,F. and Pradel,E.
  TITLE     Functional and structural analysis of HicA3-HicB3, a novel
            toxin-antitoxin system of Yersinia pestis
  JOURNAL   J Bacteriol 196 (21), 3712-3723 (2014)
   PUBMED   25112480
REFERENCE   4  (residues 1 to 83)
  AUTHORS   Makarova,K.S., Grishin,N.V. and Koonin,E.V.
  TITLE     The HicAB cassette, a putative novel, RNA-targeting toxin-antitoxin
            system in archaea and bacteria
  JOURNAL   Bioinformatics 22 (21), 2581-2584 (2006)
   PUBMED   16895922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10003996
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..83
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /GO_component="GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA]"
                     /calculated_mol_wt=9085
     Region          5..>52
                     /region_name="HicB"
                     /note="Antitoxin component HicB of the HicAB
                     toxin-antitoxin system [Defense mechanisms]; COG1598"
                     /db_xref="CDD:441206"
ORIGIN      
        1 msnvkftalv eedysshnfs vyipelrlsa igdtldealt nakeaiemtl agtagkqmkl
       61 yrsqvlmirs ienpfieevs tsa
//
LOCUS       WP_235240845             348 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidylprolyl isomerase [Paenibacillus alkaliterrae].
ACCESSION   WP_235240845
VERSION     WP_235240845.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025002.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13616.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..348
                     /product="peptidylprolyl isomerase"
                     /EC_number="5.2.1.8"
                     /calculated_mol_wt=38466
     Region          7..318
                     /region_name="prsA"
                     /note="peptidylprolyl isomerase; Provisional; PRK04405"
                     /db_xref="CDD:235295"
ORIGIN      
        1 mlhssrksaw rngallivav llvmtmaacg aketevatyk ggnvtdtefd kylavftvmq
       61 pgyeqiieip qfkeqllqqy isykilgsqa seestkkaee dvkeqmkqyk dalskntelk
      121 aavdakklkd kdmehymmlt stvvahmnsk vteeemktey etngadyatv tvrhilvatt
      181 ttdettqeqk elrtveeala rakevkekla aggdwaalak eysddpgske tgglyadqka
      241 gswveafkqa aytqevgvlg epveteygyh vilvekrdip aydklsdadk eavksavsyt
      301 hmnkfmtdel pkqeieiklp epettdapag eetpatdtpa eteapaae
//
LOCUS       WP_235241016             675 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-glucuronidase family glycosyl hydrolase [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235241016
VERSION     WP_235241016.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 675)
  AUTHORS   Nurizzo,D., Nagy,T., Gilbert,H.J. and Davies,G.J.
  TITLE     The structural basis for catalysis and specificity of the
            Pseudomonas cellulosa alpha-glucuronidase, GlcA67A
  JOURNAL   Structure 10 (4), 547-556 (2002)
   PUBMED   11937059
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03648.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..675
                     /product="alpha-glucuronidase family glycosyl hydrolase"
                     /GO_function="GO:0046559 - alpha-glucuronidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0045493 - xylan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=76190
     Region          6..675
                     /region_name="AguA2"
                     /note="Alpha-glucuronidase [Carbohydrate transport and
                     metabolism]; COG3661"
                     /db_xref="CDD:442878"
ORIGIN      
        1 mrhpsyecwl qyepvknsgr aneyrswcar lvvseqgevl ntavdelrsg irrmlglrpa
       61 iaaelgpskq ivigtaasvl ltpdereeas dlpedgyfmr tvsdergerl viagraergv
      121 lygcfhllrf lalgeeteel hiietpkhrl rminhwdnmd gsvergyagq siffdqnkfv
      181 adrgriadya rllasvging ltinnvnvhe veskliddsf lndvadvagt frlygiqlyl
      241 sanyaapiti gglttadpld psvgawwkga aanvyahipd fggfvvkads ehrpgpftyg
      301 rdhaeganml aealepyggv viwhcfvync mqnwrdrktd raraaydhfk pldgkfkdnv
      361 ilqikngpmd fqvrepvspl fgsmdrtrhm mefqltqeyt gqqrhlcylv pqwkealdfd
      421 tyakgegtpv ksliagitav snignddnwt ghllaqanly gfgriswnse lsaegiadew
      481 armtfgaepk vaetvldmlv rswriyenyt aplgvgwmvn pghhygpnvd gyeyslwgty
      541 hyadcvgigv drtretgtay sqqyfepnas mydtletcpd elllffhhvp ythalrsget
      601 viqhiynthf dgakqaeglv avwrqleglm desrfaevle rlqeqaehak ewrdiinsyf
      661 lrksgisdkl grmiy
//
LOCUS       WP_235241052             687 aa            linear   BCT 02-MAR-2025
DEFINITION  YIP1 family protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235241052
VERSION     WP_235241052.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 687)
  AUTHORS   Yang,X., Matern,H.T. and Gallwitz,D.
  TITLE     Specific binding to a novel and essential Golgi membrane protein
            (Yip1p) functionally links the transport GTPases Ypt1p and Ypt31p
  JOURNAL   EMBO J 17 (17), 4954-4963 (1998)
   PUBMED   9724632
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016764.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04893.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..687
                     /product="YIP1 family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=77431
     Region          70..352
                     /region_name="NHL"
                     /note="NHL repeat unit of beta-propeller proteins;
                     cd05819"
                     /db_xref="CDD:271320"
     Region          74..110
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          116..158
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          166..200
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          208..269
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          275..317
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          326..352
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          362..385
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <367..>417
                     /region_name="TadD"
                     /note="Flp pilus assembly protein TadD, contains TPR
                     repeats [Intracellular trafficking, secretion, and
                     vesicular transport, Extracellular structures]; COG5010"
                     /db_xref="CDD:444034"
     Region          390..415
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          489..661
                     /region_name="Yip1"
                     /note="Yip1 domain; pfam04893"
                     /db_xref="CDD:461468"
ORIGIN      
        1 mvkfkfilfi aiimlllpst afanapyitf tinhdgepil tqsaylptgv vdgfnitekd
       61 tgtgeeksvp lsrpedlfid skdrvyvadt gnarivvfdq wgnylqtigq dtlskptgvf
      121 vdeegavyva dyghekvfif nqdgkvrkef gkpdshlfgk nnpfkptkvi adkrknlfvv
      181 gegtihgliq isqegeflgy fggnktgfnl tkvlqrtfyt qaqrdqlmkq lppsatnvav
      241 dseglvytst vgtrddsikk lnvagknllp dlwsypdiad itvdalgniy avdsfrgrvi
      301 eydrdgnilf ifggtdegsq rlglfkspsg iavssdgrlf ivdkqrnniq ilqateftti
      361 vhealfhfad gkyaqsegpw idvlrlnsmf dlahtglgms amkqgeyeta leefrvagnk
      421 eeysnaywei rrmwlmahts kymigivlli aavivmkkly rkygfareav dgwqrfkqrk
      481 laaqllhpfr lmrhpvdgyy eleaegkssv lsatilliml fvvrvfviye tnflfadwdv
      541 ikvnlftefl kvyipffawv isnylvssin dgegkfkdiy kgsvyalspy ilfagpvaim
      601 sqgltrlevv lydfasasiv lysvfllfmm vkeihgyelg qtvknifltl igmlimalla
      661 filfglsnqv tdfiysifqe vkyrven
//
LOCUS       WP_235241069             130 aa            linear   BCT 02-MAR-2025
DEFINITION  gp53-like domain-containing protein [Escherichia coli].
ACCESSION   WP_235241069
VERSION     WP_235241069.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047045.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21882.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..130
                     /product="gp53-like domain-containing protein"
                     /calculated_mol_wt=13633
ORIGIN      
        1 mmpvscylci flnvglgeaa krnvgtganq ipdmgsfmls asvpgyqklp sgliiqwgpi
       61 dvpltsqdtv tyfpiafpnr clrvfatqdy tpgsanvgyi acagynqdpv kfisragvpg
      121 igasffalgc
//
LOCUS       WP_235241095             817 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase family protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235241095
VERSION     WP_235241095.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04851.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..817
                     /product="DEAD/DEAH box helicase family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=93595
     Region          9..150
                     /region_name="PLDc_SF"
                     /note="Catalytic domain of phospholipase D superfamily
                     proteins; cl15239"
                     /db_xref="CDD:472788"
     Site            order(93,95,112,114,125)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197200"
     Site            93
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197200"
     Region          159..717
                     /region_name="SSL2"
                     /note="Superfamily II DNA or RNA helicase [Transcription,
                     Replication, recombination, and repair]; COG1061"
                     /db_xref="CDD:440681"
ORIGIN      
        1 mpdikliten ladelipsik kasgiyilts fvmesgvrll apylkealnr gaevkllagd
       61 ylfvsqpeal rallnihpsi earlwrsrgt sfhpkaylfd ygdgqglfiv gssnlslsaf
      121 rmgvewnlav naqaepftfq halvnfmrnf yheftqplne ttiayyetay kayhqkypel
      181 vqsisemees elmlpqkdnk qedtapsems alispraaqq galealdity eegydkamvv
      241 matglgktyl agffakerfq rvlfiahree ilnqakrsfl himpdktagl yngsdketgt
      301 dfvfasiytl stkmhrerfd peafdlivid efhhaaaksy qsvlsyfhpk fllgitatpd
      361 rmdgkdvyai cdgnvayqlh fieaiqkgwl cpfhyygvyd atdysqltwl gtkydedell
      421 avqlreevas niyeawdrhk qtrtigfcss iiqanflsdy fskqgaasls lhsdtrsmtr
      481 qeairrlese elqiiftvdl fnegvdipsv dtllfvrptq sltvftqqvg rglrlhagkq
      541 actiidlign yrnadiklsl fdtgageeaa gkresatpip pagcvielet svinmleela
      601 rkkqprkdrl rsvyleikee lgrrphylel hllgkvnske yrqefgsyig flywckelne
      661 heeavylqye rwfkevestl maksykmvll lamlvrgtsg whapitpqea apffhrymte
      721 keyrrkidfs dketlrleey deqkvaalia rmpmskwsgs skeqiafdng vfkpeleiqp
      781 ehaelvfswt reiceyrlhg yfekkaetev nhetrsv
//
LOCUS       WP_235241099             502 aa            linear   BCT 02-MAR-2025
DEFINITION  GMC oxidoreductase [Paenibacillus alkaliterrae].
ACCESSION   WP_235241099
VERSION     WP_235241099.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05199.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..502
                     /product="GMC oxidoreductase"
                     /GO_function="GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /calculated_mol_wt=55284
     Region          60..502
                     /region_name="BetA"
                     /note="Choline dehydrogenase or related flavoprotein
                     [Lipid transport and metabolism, General function
                     prediction only]; COG2303"
                     /db_xref="CDD:441878"
ORIGIN      
        1 mydsrqsraa vppyfpegtd pqwlpltple qmaqtdydvl ivgtgaggga vlwriceglk
       61 dsgkrigvie agdlllpthg mnlptsgwal ssignqffpi gdflpqysaa rqffglggrt
      121 lnwgiaaprm hrsdmihwpv plremekyyk iaeqamfvsh afaegstlse itinrlwqng
      181 flesvylpma adlaqtkyge lhsnvyfssi lflaralklr tydlavrara iqivtengka
      241 agvravspdk kwydlkaktv vlsastlenp rillnsgiqg haighyltnh sgveawgtin
      301 keqfpeiagt lallvpgtef rpyqvqiqgf inggypfyps vyhysidkpa sdisdyvmwa
      361 fgkvesrfen kvglspslrd eygvpmiqvd fshsnrdlev igqmsqaliq vseamdapin
      421 ikdgrldisn wipgrdfhec gtcrmgdnpl tsttnrfgqv hgvsglyvad nsvlptlgaa
      481 nptltavala irttdylieq lk
//
LOCUS       WP_235241120             220 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Paenibacillus alkaliterrae].
ACCESSION   WP_235241120
VERSION     WP_235241120.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 220)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..220
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=23950
     Region          5..212
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mkikillvdd hqivlkgisf flrmqpdfel ageacngkea vekaaelqpd iilmdlnmpi
       61 mdgieasqli vqqnpetkil vltsfsdrsh ivpalqsgai gymlkdvepd qlaeairsaf
      121 kgnvqlhpdi analvaqadp htepvngqsa reikdsltpr erevvlllak gmsnkeiaks
      181 ltvaektvkt hvssilskln lsdrtqaaly avktlhvsep
//
LOCUS       WP_235240668             278 aa            linear   BCT 02-MAR-2025
DEFINITION  aminoglycoside adenylyltransferase domain-containing protein
            [Paenibacillus alkaliterrae].
ACCESSION   WP_235240668
VERSION     WP_235240668.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 278)
  AUTHORS   Stern,A.L., Van der Verren,S.E., Kanchugal,P. S, Nasvall,J.,
            Gutierrez-de-Teran,H. and Selmer,M.
  TITLE     Structural mechanism of AadA, a dual-specificity aminoglycoside
            adenylyltransferase from Salmonella enterica
  JOURNAL   J Biol Chem 293 (29), 11481-11490 (2018)
   PUBMED   29871922
REFERENCE   2  (residues 1 to 278)
  AUTHORS   Chen,Y., Nasvall,J., Wu,S., Andersson,D.I. and Selmer,M.
  TITLE     Structure of AadA from Salmonella enterica: a monomeric
            aminoglycoside (3'')(9) adenyltransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 71 (Pt 11), 2267-2277 (2015)
   PUBMED   26527143
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024819.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13427.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..278
                     /product="aminoglycoside adenylyltransferase
                     domain-containing protein"
                     /calculated_mol_wt=31241
     Region          35..277
                     /region_name="PRK13746"
                     /note="aminoglycoside resistance protein; Provisional"
                     /db_xref="CDD:184296"
     Region          157..269
                     /region_name="DUF4111"
                     /note="Domain of unknown function (DUF4111); pfam13427"
                     /db_xref="CDD:433197"
ORIGIN      
        1 mtgpqawpnc dedikrfvvn lmerlkseag kkvtgiylhg slamgsyyrp ksdidlivvv
       61 dgkleadlae avgiaiakvt snrpmignve lsvitadvak kvpvptpfev hyssgwhdki
      121 lnlevdyske rtdtdlsshl ayvaqrgvcl ygkpiseifg qvnwqhfmea vmddldwile
      181 dehiletpfy svlnicrvfq lmsedcqsvh skdeggewgl ghlpqeyhtv iqlaldvyrs
      241 sdkvteehrk tggkewdqak llafrnfarm kiknelgg
//
LOCUS       WP_235241124             335 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3231 family protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235241124
VERSION     WP_235241124.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022986.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11553.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..335
                     /product="DUF3231 family protein"
                     /calculated_mol_wt=37870
     Region          1..154
                     /region_name="DUF3231"
                     /note="Protein of unknown function (DUF3231); pfam11553"
                     /db_xref="CDD:402931"
     Region          171..329
                     /region_name="DUF3231"
                     /note="Protein of unknown function (DUF3231); pfam11553"
                     /db_xref="CDD:402931"
ORIGIN      
        1 mnsnpiplts telgnlwmty qektmllrfl eyflehaedq eiqqilksty dlsgqfveti
       61 knifqqegav ipigftvndv nkgvpklfdy lyesmflhmm gkieaslfal ystmayrkdi
      121 rklfidltan sqqmfdqcte lllekgvlvr ppymsmpkev tfikdnhyls gfnllgdtrs
      181 lnaieislih haietnltgm qlmigfaqva hdkqvqqyfv kgmklskdve ttlgeylrqd
      241 yieppathag katnstvapf tdklmmyitn llgsfglgsn alggafslrg dlpvtmarla
      301 lkivpfvkeg geimiknswm eeppqiedrk qltks
//
LOCUS       WP_235241219             318 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235241219
VERSION     WP_235241219.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..318
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=37163
     Region          <28..>90
                     /region_name="QdoI"
                     /note="Cupin domain protein related to quercetin
                     dioxygenase [General function prediction only]; COG1917"
                     /db_xref="CDD:441521"
     Region          88..304
                     /region_name="AraC"
                     /note="AraC-type DNA-binding domain and AraC-containing
                     proteins [Transcription]; COG2207"
                     /db_xref="CDD:441809"
ORIGIN      
        1 mpfietnidt hseaineevi yqnpllflki weicleaqhc svvenhpwhy hkevefiavi
       61 eghlgvqskh nyvvlgpgdv mvlgasqphr shkpltdilh yvvfqidlgk hfdqstmpyl
      121 ycfseltepl dklnyifdvn esakretyaf imeifnesqt rmrgyemais stikrlmlll
      181 lrsdsrnvln yteetelnrl rpvldyindh lndklcveda ctllnlsyhy fikyfkktmg
      241 vsfveyinyk rikrsellll tselsimdvs yevgisnmaq fyklfkrhnq csprefkqrm
      301 rsestraatl ssvsvsdk
//
LOCUS       WP_235241204             172 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3231 family protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235241204
VERSION     WP_235241204.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022986.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11553.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..172
                     /product="DUF3231 family protein"
                     /calculated_mol_wt=18896
     Region          2..166
                     /region_name="DUF3231"
                     /note="Protein of unknown function (DUF3231); pfam11553"
                     /db_xref="CDD:402931"
ORIGIN      
        1 mgilsgnpkn eplhygeiyd vwqfsmiakg cissnkalkf hagdtelkkm fdqlieqael
       61 earecdtiln rngivpppal pdrpeakled ipigaryndv eiapmlsvdl aaglvacsqi
      121 mgtsiredvi alftkyhaak aemglkvlrm skdkgwlvpp plqikrpelv ea
//
LOCUS       WP_235241233             243 aa            linear   BCT 02-MAR-2025
DEFINITION  Mu transposase domain-containing protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235241233
VERSION     WP_235241233.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 243)
  AUTHORS   Rice,P. and Mizuuchi,K.
  TITLE     Structure of the bacteriophage Mu transposase core: a common
            structural motif for DNA transposition and retroviral integration
  JOURNAL   Cell 82 (2), 209-220 (1995)
   PUBMED   7628012
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046294.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22483.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..243
                     /product="Mu transposase domain-containing protein"
                     /calculated_mol_wt=27755
     Region          <2..39
                     /region_name="transpos_IS21"
                     /note="IS21 family transposase; NF033546"
                     /db_xref="CDD:468077"
ORIGIN      
        1 meeanaylle vcerlnnkpq drregksaaa cleeerpflf eglpmfdaar vvharvdkya
       61 tvvvdqnhys vpdhlvgklv mvkiysgriq cfyeemkiae hnrlvgchew rlellhylet
      121 lkkkpgalag stalaqaqsh ikniyetyys rrekdfvell qyirddanle evqrsikqld
      181 nlhpshvttd kvkalcakgr emgatpllhs qasqailqqa eaqlrqydem fgthtiqmke
      241 aia
//
LOCUS       WP_235241235             750 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235241235
VERSION     WP_235241235.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..750
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=86317
     Region          33..274
                     /region_name="dCache_1"
                     /note="Cache domain; pfam02743"
                     /db_xref="CDD:460673"
     Region          379..502
                     /region_name="GGDEF_2"
                     /note="GGDEF-like domain; pfam17853"
                     /db_xref="CDD:465533"
     Region          <557..740
                     /region_name="PRK10296"
                     /note="DNA-binding transcriptional regulator ChbR;
                     Provisional"
                     /db_xref="CDD:182362"
     Region          658..739
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
ORIGIN      
        1 mplfykylis ylalliipll ligllvyqhy vailkdeits nhqrmleqiq dsfdskikem
       61 nkisaeiask peltpyqlkq nmynavkakn lfltytsani fikevflyik dqpyvysgss
      121 typtalfidt fyryenwsfe qftkdmseld rpvlrhsepi asarltddrv ltylvplpln
      181 aaspygsvmf vieektvrkm lqglldnsdg ntvildekgn rvvslrdeay leqsgfhrqa
      241 erlpigtstg mldgkeyafs kvrsddfnwt yitmlpieqf mqrvgevksr allslgmvlv
      301 igcaliyaml hfnyhplrrf llftgkqwge syrnlnevlh avhkiteekq mlgralndsr
      361 iavhehmlla lmtgrvtdpe pflekageag irftksglfv vrlavrymen lprqqqigil
      421 dgmeammrdr fecyrvegle gpivnficav gpedgewpre mkelhgaire rygidvtvga
      481 gnrrqdirql gksfieasta ldfrllkgyn evilyadiad qtnlgcnypr qdietmevli
      541 rqgdtesltk vvrgilsfie ssamplhmvr cicydminci vketyrlkgt letadesypd
      601 vfsltkfdti qeladvievm cgqlcadivr sqsesksggq kqemldyiqa nyddqqfsvq
      661 nmadhfaisa sylkrqfkeq tgktitdfln hyrmeqakhl lrttdmklkd ivprigyfdv
      721 psfirkfkqa fkvtpgdyrk lyetkehrse
//
LOCUS       WP_235241244             275 aa            linear   BCT 02-MAR-2025
DEFINITION  TnsA endonuclease N-terminal domain-containing protein
            [Paenibacillus alkaliterrae].
ACCESSION   WP_235241244
VERSION     WP_235241244.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 275)
  AUTHORS   M Iyer,L., Anantharaman,V., Krishnan,A., Burroughs,A.M. and
            Aravind,L.
  TITLE     Jumbo Phages: A Comparative Genomic Overview of Core Functions and
            Adaptions for Biological Conflicts
  JOURNAL   Viruses 13 (1), 63 (2021)
   PUBMED   33466489
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 275)
  AUTHORS   Benler,S., Hung,S.H., Vander Griend,J.A., Peters,G.A., Rohwer,F.
            and Segall,A.M.
  TITLE     Gp4 is a nuclease required for morphogenesis of T4-like
            bacteriophages
  JOURNAL   Virology 543, 7-12 (2020)
   PUBMED   32056848
REFERENCE   3  (residues 1 to 275)
  AUTHORS   Steczkiewicz,K., Muszewska,A., Knizewski,L., Rychlewski,L. and
            Ginalski,K.
  TITLE     Sequence, structure and functional diversity of PD-(D/E)XK
            phosphodiesterase superfamily
  JOURNAL   Nucleic Acids Res 40 (15), 7016-7045 (2012)
   PUBMED   22638584
REFERENCE   4  (residues 1 to 275)
  AUTHORS   Hickman,A.B., Li,Y., Mathew,S.V., May,E.W., Craig,N.L. and Dyda,F.
  TITLE     Unexpected structural diversity in DNA recombination: the
            restriction endonuclease connection
  JOURNAL   Mol Cell 5 (6), 1025-1034 (2000)
   PUBMED   10911996
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020305.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08722.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..275
                     /product="TnsA endonuclease N-terminal domain-containing
                     protein"
                     /calculated_mol_wt=31625
     Region          28..258
                     /region_name="TnsA_endonuclease-like"
                     /note="Transposon Tn7 transposition protein TnsA; cd22362"
                     /db_xref="CDD:411766"
     Site            order(63,82,117,130,132)
                     /site_type="active"
                     /db_xref="CDD:411766"
     Site            order(66,69..70,73,76,98..100,122,127,140,143..144,
                     146..147,150..151,161..164,166..167)
                     /site_type="other"
                     /note="TnsC binding interface [polypeptide binding]"
                     /db_xref="CDD:411766"
ORIGIN      
        1 makrkrqlte akiekmikeg rgqgtgkdyl pwlkiqdvps egratrgvgw ttgrrhells
       61 dierdycyll dyadevsdir eqypllplee tlmiaekigv nhpqdpktgv pivmttdfli
      121 tygdkdcart vkpfsemede rtiakfeier vywetrhidw giiidrdlpd vlirniewvh
      181 keylnedvsd lgvftirnle qmlaarldeg eaiskaclac derlglevgt slalfrhfva
      241 rkkwsvnmne riiptlpake fkiatpeyrl eakgg
//
LOCUS       WP_235241259             124 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235241259
VERSION     WP_235241259.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 124)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 124)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..124
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=13079
     Region          11..>123
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 machwcrarh ggdiakaalt agnqvvatgr ntdrvakalg ddenllvvkl dvtspadaea
       61 avkaavdkfg kidvlvnnaa nfyggffeel tldqiesqvr taligpmnvt ravlpvmrkq
      121 rsgs
//
LOCUS       WP_235241265             682 aa            linear   BCT 02-MAR-2025
DEFINITION  YIP1 family protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235241265
VERSION     WP_235241265.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 682)
  AUTHORS   Yang,X., Matern,H.T. and Gallwitz,D.
  TITLE     Specific binding to a novel and essential Golgi membrane protein
            (Yip1p) functionally links the transport GTPases Ypt1p and Ypt31p
  JOURNAL   EMBO J 17 (17), 4954-4963 (1998)
   PUBMED   9724632
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016764.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04893.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..682
                     /product="YIP1 family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=76942
     Region          61..358
                     /region_name="NHL"
                     /note="NHL repeat unit of beta-propeller proteins;
                     cd05819"
                     /db_xref="CDD:271320"
     Region          66..104
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          115..154
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          165..199
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          207..274
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          283..324
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          333..358
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          366..391
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <373..>421
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          396..433
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          486..658
                     /region_name="Yip1"
                     /note="Yip1 domain; pfam04893"
                     /db_xref="CDD:461468"
ORIGIN      
        1 miikrsilil aavmifvgls pkpahaspye gytysnwgea vqspiaylps rtitgqeigi
       61 gpwtapsdlf aapdgnlyvl dsgngrivvl nsewkavrqm qgfqrngqqe sfnnpegifv
      121 tgaghiyvad tenrrvveld gsgafvreig apksevisdn feyfprkviv dkagriyvva
      181 rgvyegiief dseggftgfm gtnrvqfdpv dlfwktvstk eqreklirfv piefnnmdvd
      241 adgfiyttta dkqtlapvkr lnpsgidvlr vngsmgpvgd lsrersafid idesgngvyr
      301 tldstrgrif tynedgnlly vigqlgnqig tfknpvaies ignriyvldr dlgritefaa
      361 tkfgslvgea nglysagkhd aaaklweevl rldanyemay igigksmlrk geykqamtfl
      421 klgnereyys kaltkyrrey mrehfgtymt mvialilvvm tvrrrmrlrk gasnrmrflk
      481 earyslhvaf hpfdgfwdlk yenkgklria liilfavtvt milkrqyagy vvnynhplel
      541 nsidelkyiv lpfllwcvan wslttlmdge gkfkeiviat gyamlplili ylpnmvlsnv
      601 islreasfyy llesaaglwf vwllfigtmt vhqytvtkti ltmlltvvvm gviiflgllf
      661 fsliqqivsf vytiyqelsl ra
//
LOCUS       WP_235241240             537 aa            linear   BCT 02-MAR-2025
DEFINITION  Tn7-like element transposition protein TnsE [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235241240
VERSION     WP_235241240.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 537)
  AUTHORS   Shi,Q., Straus,M.R., Caron,J.J., Wang,H., Chung,Y.S., Guarne,A. and
            Peters,J.E.
  TITLE     Conformational toggling controls target site choice for the
            heteromeric transposase element Tn7
  JOURNAL   Nucleic Acids Res 43 (22), 10734-10745 (2015)
   PUBMED   26384427
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037363.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18623.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..537
                     /product="Tn7-like element transposition protein TnsE"
                     /calculated_mol_wt=60624
     Region          400..531
                     /region_name="TnsE_C"
                     /note="TnsE C-terminal domain; pfam18623"
                     /db_xref="CDD:436628"
ORIGIN      
        1 matltlkswp fpenheaelv wfgspfmdyk gnwrirvafr tsaegikvvs ypwgtipylr
       61 igqiysngty dqitpmsgsa fqftidafnh gtvtngfklp krlidfgkip elglqniiqy
      121 qtngltycip vieliramli nsrylayyll qphgldllid nsyslgktlh ldlsnrvpak
      181 latdsnvrhl swiysdpmir slwdsvyqnm fiqavksspy npssslkkgv plnidlpslg
      241 siemhtrgvq fidyvlvkei iaiggfqhps neilfwhpsk krrewssgdk tirmipgskn
      301 tdyvlndqsd nakedsnqdi letsptimrf anypvvetrr ssvrhsntgn evfvstgrgg
      361 khaaaseevs thdsmvggdt ppidfqtlet ipaseaigle lffqmiemlk kkltvnvrms
      421 vvrvppgrrf svcmngsrrt caiiqvtnga stsyivevar pvdwsistli lrpmnqlsfr
      481 iiernikqll dglvlksghw dqsvlnqcdt mnieklkhyq sdtirewasr lasklmt
//
LOCUS       WP_235241241             409 aa            linear   BCT 02-MAR-2025
DEFINITION  TnsD family Tn7-like transposition protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235241241
VERSION     WP_235241241.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 409)
  AUTHORS   Mitra,R., McKenzie,G.J., Yi,L., Lee,C.A. and Craig,N.L.
  TITLE     Characterization of the TnsD-attTn7 complex that promotes
            site-specific insertion of Tn7
  JOURNAL   Mob DNA 1 (1), 18 (2010)
   PUBMED   20653944
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027308.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15978.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..409
                     /product="TnsD family Tn7-like transposition protein"
                     /calculated_mol_wt=46762
     Region          22..334
                     /region_name="TnsD"
                     /note="Tn7-like transposition protein D; pfam15978"
                     /db_xref="CDD:379756"
ORIGIN      
        1 mfrsiavied lpdklidrls diaedihllv qqdnlpalyd lrqailprla ekgyvtvssr
       61 irqqklceql vlfysrelld lidsdptesr yswleqstrt arraihplrq lllirflygs
      121 frefldrtng anapfgnapw pclnkaadhy kklvvthcdi trcsdtgrpv gtfacscgfs
      181 ysrcgpdkse adkyyrgrik tfgpiwsdkl kqcmqdgmsy rsaaerlgvd tntvikyang
      241 klperngplk pkksnkartt spsisssdvp fmrvnwekrd lelswgveqt ckailadins
      301 kpvritiali gkrigklswl eknqhklpvt msiltvyies vsqfqmrrvr waaerlsgew
      361 pikrwklekl aglrpdysqe vsgeidrcig qsrllqpfts seeksswqh
//
LOCUS       WP_235241266             851 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5696 domain-containing protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235241266
VERSION     WP_235241266.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039504.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18952.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..851
                     /product="DUF5696 domain-containing protein"
                     /calculated_mol_wt=94315
     Region          233..843
                     /region_name="DUF5696"
                     /note="Family of unknown function (DUF5696); pfam18952"
                     /db_xref="CDD:436859"
ORIGIN      
        1 mkrrlaiimt aviigcllis qgtnfaetts gpvsepdssp gtasdpnsvg eaeaadlaeg
       61 metaaenefl ilyvnpktte iavkdkrsga fwysnpqdre ddsvatgynk aklnvqveis
      121 yfdsagnslk ydnythsvqn gqfvigkvsd glnivytlge vksdidaipk yiseerfqtl
      181 ildkiedsgd krevekrfkh nkenkryerr dssfkgvgls kvtkifdqig yneeqraidk
      241 aangeaaggd vsvriplhyq ldgehlkvtv taseleypds mkiqtlsllp ffgasgrede
      301 gytlvpdgsg slirfnnekt yaapfrtaly gtdssmsqli riqkeetarl pvfgmkyedr
      361 afvaiieegd avaaveadvs grlndyntvs psftihnlee vtltngwrss tvkkfqaepf
      421 qggitvrygf lgaeeasysg maghyrdyli kqagiarlte eenmpfyvel iggiqkkkff
      481 lgipynayep lttfeqaetv laqmqdqgig siklrysgwf ndginhnlpk sikvdkklgg
      541 nkglndlaay adanrislfp daaflesapq adgfkksnla srlitgklaq vypystadfr
      601 qdneqepgyv lspkalpniv dgfmgdygkl qltgmslrdl gsklnsdfnr sevidreeak
      661 giiheqlkvm sgsvqelmve ggnayaapya rhivnapmts sgfnitdesv pffqlvyhgy
      721 vhyagsawnm andqdsafnf lkaletgsal hytwffadss aimmteydhl ysadyrrwie
      781 eaaqryreln dvlhdvqsqt iadhrklvdg vyqttfekgk siivnyndsa atvdgikvga
      841 nnywvggetq r
//
LOCUS       WP_235241298             362 aa            linear   BCT 02-MAR-2025
DEFINITION  Fe-Mn family superoxide dismutase [Paenibacillus alkaliterrae].
ACCESSION   WP_235241298
VERSION     WP_235241298.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 362)
  AUTHORS   Knapp,S., Kardinahl,S., Hellgren,N., Tibbelin,G., Schafer,G. and
            Ladenstein,R.
  TITLE     Refined crystal structure of a superoxide dismutase from the
            hyperthermophilic archaeon Sulfolobus acidocaldarius at 2.2 A
            resolution
  JOURNAL   J Mol Biol 285 (2), 689-702 (1999)
   PUBMED   9878438
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014796.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02777.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..362
                     /product="Fe-Mn family superoxide dismutase"
                     /GO_function="GO:0004784 - superoxide dismutase activity
                     [Evidence IEA]"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006801 - superoxide metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=41921
     Region          12..133
                     /region_name="DUF2935"
                     /note="Domain of unknown function (DUF2935); pfam11155"
                     /db_xref="CDD:463232"
     Region          162..350
                     /region_name="SodA"
                     /note="Superoxide dismutase [Inorganic ion transport and
                     metabolism]; COG0605"
                     /db_xref="CDD:440370"
ORIGIN      
        1 mlfvygslmp vrvmelirhw kmqekehttv ilqavpeler qyvqllqswd pvfshtahya
       61 tqwldewlpy ptrlpsqveq tveslvdaal eqsrtyvdql sqlvdrtssp agpsnyrtvi
      121 lhairesnyy iglmsayrqa snspgnrehr aplqqvpigg htlpplpypy dalepyideq
      181 tmrihhdihh qsyvdglnka etqlqiardt gnfdlvkhwe relafngagh ylhtlfwnnm
      241 spygggdavg tlasqiandf gsyaafkkqf seaaakvegg gwailvwspr srrleiltae
      301 khqnlsqwdv ipllaldvwe hayylkhqnr rpeyvkdwwn vvnwpyvsdr feearrlvwv
      361 py
//
LOCUS       WP_235241320             279 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar motor protein MotB [Paenibacillus alkaliterrae].
ACCESSION   WP_235241320
VERSION     WP_235241320.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 279)
  AUTHORS   Hosking,E.R., Vogt,C., Bakker,E.P. and Manson,M.D.
  TITLE     The Escherichia coli MotAB proton channel unplugged
  JOURNAL   J Mol Biol 364 (5), 921-937 (2006)
   PUBMED   17052729
REFERENCE   2  (residues 1 to 279)
  AUTHORS   Braun,T.F., Al-Mawsawi,L.Q., Kojima,S. and Blair,D.F.
  TITLE     Arrangement of core membrane segments in the MotA/MotB
            proton-channel complex of Escherichia coli
  JOURNAL   Biochemistry 43 (1), 35-45 (2004)
   PUBMED   14705929
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025057.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13677.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..279
                     /product="flagellar motor protein MotB"
                     /calculated_mol_wt=31674
     Region          1..262
                     /region_name="motB"
                     /note="flagellar motor protein MotB; Reviewed; PRK07734"
                     /db_xref="CDD:236080"
ORIGIN      
        1 mskkhrheeh eehvdeswli pyadlmtlll alfivlysmn svdvkkfeem sqafsialss
       61 gsgvldqtti vkigeddgkk reeegskeee kkdesrqaqt eeekvleali kqeqedlekl
      121 kkqidayiek qgltsdletk lnqsqlmiti sdnalfapaq asvkpesrel avaigkmlqn
      181 ypnyqvvvsg htdnkpisna ffksnwdlss mrsirfmdil lenkqlkper fsaigygehr
      241 piadnktveg raknrrvevs ilhsyidpvn ahkltlpdk
//
LOCUS       WP_235241358             241 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2161 family putative PD-(D/E)XK-type phosphodiesterase
            [Paenibacillus alkaliterrae].
ACCESSION   WP_235241358
VERSION     WP_235241358.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 241)
  AUTHORS   Steczkiewicz,K., Muszewska,A., Knizewski,L., Rychlewski,L. and
            Ginalski,K.
  TITLE     Sequence, structure and functional diversity of PD-(D/E)XK
            phosphodiesterase superfamily
  JOURNAL   Nucleic Acids Res 40 (15), 7016-7045 (2012)
   PUBMED   22638584
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021449.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09929.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..241
                     /product="DUF2161 family putative PD-(D/E)XK-type
                     phosphodiesterase"
                     /calculated_mol_wt=27064
     Region          3..235
                     /region_name="DUF2161"
                     /note="Putative PD-(D/E)XK phosphodiesterase (DUF2161);
                     cl02298"
                     /db_xref="CDD:470527"
ORIGIN      
        1 mavareeely npikkyyeql gfivksevlh cdlvavhper setiivemkk tfnlalllqg
       61 ierlrlnshv vlavernrkk sgahnqrfgd ltelcrmlgl gfmtvtfykt kppviellcg
      121 pgdppqrgvr rrkqeqllle fnersgdyni ggstgrklvt ayrekalrca halqasgpla
      181 prevaaitgy srsgqtlrnn yygwfdrver gkyklrpegv aalieygdvi aewaasissa
      241 p
//
LOCUS       WP_235241417              54 aa            linear   BCT 02-MAR-2025
DEFINITION  AraC family transcriptional regulator [Paenibacillus alkaliterrae].
ACCESSION   WP_235241417
VERSION     WP_235241417.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 54)
  AUTHORS   Saviola,B., Seabold,R. and Schleif,R.F.
  TITLE     Arm-domain interactions in AraC
  JOURNAL   J Mol Biol 278 (3), 539-548 (1998)
   PUBMED   9600837
REFERENCE   2  (residues 1 to 54)
  AUTHORS   Seabold,R.R. and Schleif,R.F.
  TITLE     Apo-AraC actively seeks to loop
  JOURNAL   J Mol Biol 278 (3), 529-538 (1998)
   PUBMED   9600836
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012392.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00165.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..54
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..54
                     /product="AraC family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=6366
     Region          <1..46
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
ORIGIN      
        1 mektcellkh srlkiyeice qvgyvdpkyf skvfqkhfsm tpnefrlknd ragi
//
LOCUS       WP_235241505             377 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Paenibacillus alkaliterrae].
ACCESSION   WP_235241505
VERSION     WP_235241505.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..377
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=43279
     Region          <124..356
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mqvvfrnyfy eptgfgnsar qiaykmedag idvkiealgt vyhclddael qrlhamenkp
       61 lqeeqvllti einrhphers rfkkalsctm wetskapeem ihginqfdgl iipnefnrqs
      121 flnggakipl fiapygvdsd lyrpegprdr lgesdhlfif lsvfgwserk apqillnayl
      181 eefhadepvl lmiktfgnev gkfplewyee aiknitnrqd lprvrlitkt miphqmaafy
      241 rgadcfvmpt rgegvglpil esmacqkpvi atgwssqvef lnpsngylip yrllpakplh
      301 ytnlyspdqi wadadagalq llmrrvyfqr qearikavha retarkwnwd rsaqafiqai
      361 eltvggkvtt hhlerrr
//
LOCUS       WP_235240344             120 aa            linear   BCT 02-MAR-2025
DEFINITION  metal-sensing transcriptional repressor [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235240344
VERSION     WP_235240344.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 120)
  AUTHORS   Sakamoto,K., Agari,Y., Agari,K., Kuramitsu,S. and Shinkai,A.
  TITLE     Structural and functional characterization of the transcriptional
            repressor CsoR from Thermus thermophilus HB8
  JOURNAL   Microbiology (Reading) 156 (Pt 7), 1993-2005 (2010)
   PUBMED   20395270
  REMARK    Erratum:[Microbiology. 2014 Dec;160(Pt 12):2820]
REFERENCE   2  (residues 1 to 120)
  AUTHORS   Tian,J., Wu,N., Li,J., Liu,Y., Guo,J., Yao,B. and Fan,Y.
  TITLE     Nickel-resistant determinant from Leptospirillum ferriphilum
  JOURNAL   Appl Environ Microbiol 73 (7), 2364-2368 (2007)
   PUBMED   17293508
REFERENCE   3  (residues 1 to 120)
  AUTHORS   Marrero,J., Auling,G., Coto,O. and Nies,D.H.
  TITLE     High-level resistance to cobalt and nickel but probably no
            transenvelope efflux: Metal resistance in the Cuban Serratia
            marcescens strain C-1
  JOURNAL   Microb Ecol 53 (1), 123-133 (2007)
   PUBMED   17186148
REFERENCE   4  (residues 1 to 120)
  AUTHORS   Liu,T., Ramesh,A., Ma,Z., Ward,S.K., Zhang,L., George,G.N.,
            Talaat,A.M., Sacchettini,J.C. and Giedroc,D.P.
  TITLE     CsoR is a novel Mycobacterium tuberculosis copper-sensing
            transcriptional regulator
  JOURNAL   Nat Chem Biol 3 (1), 60-68 (2007)
   PUBMED   17143269
REFERENCE   5  (residues 1 to 120)
  AUTHORS   Iwig,J.S., Rowe,J.L. and Chivers,P.T.
  TITLE     Nickel homeostasis in Escherichia coli - the rcnR-rcnA efflux
            pathway and its linkage to NikR function
  JOURNAL   Mol Microbiol 62 (1), 252-262 (2006)
   PUBMED   16956381
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014624.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02583.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..120
                     /product="metal-sensing transcriptional repressor"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=13369
     Region          38..119
                     /region_name="CsoR-like_DUF156"
                     /note="Transcriptional regulators CsoR (copper-sensitive
                     operon repressor), RcnR, and FrmR, and related domains;
                     this domain superfamily was previously known as DUF156;
                     cl00846"
                     /db_xref="CDD:445134"
     Site            order(38,41..42,45..46,49,52..53,55..56,59..62,64..66,
                     68..70,72..73,75..76,79..80,83..84,86..88,90..92,95,
                     104..105,107..116)
                     /site_type="other"
                     /note="putative homotetramer interface [polypeptide
                     binding]"
                     /db_xref="CDD:197385"
     Site            order(38,41..42,45..46,49,52..53,55..56,59..62,64..66,
                     68..70,72..73,75..76,79..80,83,86,90,110,113..116)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:197385"
     Site            order(64,90,110)
                     /site_type="other"
                     /note="putative allosteric switch controlling residues"
                     /db_xref="CDD:197385"
     Site            order(65,90,94)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:197385"
     Site            order(84,87..88,91..92,94..95,104..105,107..109,111..112)
                     /site_type="other"
                     /note="putative homodimer-homodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:197385"
ORIGIN      
        1 mgvdhhdkkh asshreanks vpsvvhdshe hthehkhrkq ivnrlarieg hmratkemta
       61 sgrdcseill qiaaiqkald naaklllkdh legcvvdaiq kgnqeqvlad lnkalnnyir
//
LOCUS       WP_235241535             130 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar assembly protein FliW [Paenibacillus alkaliterrae].
ACCESSION   WP_235241535
VERSION     WP_235241535.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 130)
  AUTHORS   Mukherjee,S., Yakhnin,H., Kysela,D., Sokoloski,J., Babitzke,P. and
            Kearns,D.B.
  TITLE     CsrA-FliW interaction governs flagellin homeostasis and a
            checkpoint on flagellar morphogenesis in Bacillus subtilis
  JOURNAL   Mol Microbiol 82 (2), 447-461 (2011)
   PUBMED   21895793
REFERENCE   2  (residues 1 to 130)
  AUTHORS   Yakhnin,H., Pandit,P., Petty,T.J., Baker,C.S., Romeo,T. and
            Babitzke,P.
  TITLE     CsrA of Bacillus subtilis regulates translation initiation of the
            gene encoding the flagellin protein (hag) by blocking ribosome
            binding
  JOURNAL   Mol Microbiol 64 (6), 1605-1620 (2007)
   PUBMED   17555441
REFERENCE   3  (residues 1 to 130)
  AUTHORS   Titz,B., Rajagopala,S.V., Ester,C., Hauser,R. and Uetz,P.
  TITLE     Novel conserved assembly factor of the bacterial flagellum
  JOURNAL   J Bacteriol 188 (21), 7700-7706 (2006)
   PUBMED   16936039
REFERENCE   4  (residues 1 to 130)
  AUTHORS   Golden,N.J. and Acheson,D.W.
  TITLE     Identification of motility and autoagglutination Campylobacter
            jejuni mutants by random transposon mutagenesis
  JOURNAL   Infect Immun 70 (4), 1761-1771 (2002)
   PUBMED   11895937
REFERENCE   5  (residues 1 to 130)
  AUTHORS   Rain,J.C., Selig,L., De Reuse,H., Battaglia,V., Reverdy,C.,
            Simon,S., Lenzen,G., Petel,F., Wojcik,J., Schachter,V., Chemama,Y.,
            Labigne,A. and Legrain,P.
  TITLE     The protein-protein interaction map of Helicobacter pylori
  JOURNAL   Nature 409 (6817), 211-215 (2001)
   PUBMED   11196647
  REMARK    Erratum:[Nature 2001 Feb 1;409(6820):553]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014660.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02623.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     gene            1..130
                     /gene="fliW"
     Protein         1..130
                     /product="flagellar assembly protein FliW"
                     /GO_process="GO:0044780 - bacterial-type flagellum
                     assembly [Evidence IEA]"
                     /calculated_mol_wt=14931
     Region          4..128
                     /region_name="PRK13285"
                     /note="flagellar assembly protein FliW; Provisional;
                     cl00740"
                     /db_xref="CDD:469898"
ORIGIN      
        1 msiesnvyhf eygipgfehl hqfafyeveg elpmrlmksv edeeislliv spffiypeye
       61 welsesskqe lcihseadve iwsiitipse plqatinlma plvlninkki gkqlilhdnh
      121 fssraplira
//
LOCUS       WP_235241606             186 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235241606
VERSION     WP_235241606.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 186)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 186)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 186)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..186
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=20660
     Region          <2..173
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
ORIGIN      
        1 mngiplselr rddwssrvqi vfqepylfpd mirtnimigr hkysesdmra acriaqidsf
       61 ieglpdgydt eagergitls ggqrqrlaiv wallgrpeil ildeatsald meterrlqqa
      121 vdegrhgltt lvithrlstv qnsdviyvmh egkvaeagth erllalggvy aalsrqdiak
      181 klsieg
//
LOCUS       WP_235241626             166 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Paenibacillus alkaliterrae].
ACCESSION   WP_235241626
VERSION     WP_235241626.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00528.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..166
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=18267
     Region          2..>144
                     /region_name="nickel_nikC"
                     /note="nickel ABC transporter, permease subunit NikC;
                     TIGR02790"
                     /db_xref="CDD:131837"
ORIGIN      
        1 mnilekyagi skeyplgtdq lgrcilsrll fgirttilfa iittvitiai gtilgiisgf
       61 frgkvdefim ricdvmlsfp aevmilaivg ilgpglinvv ianiiakwaw ytrmirsvvi
      121 qftnknyirf akvsgcgtsh imrkpfcles pvklrflppl iqggss
//
LOCUS       WP_235241682              88 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235241682
VERSION     WP_235241682.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 88)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 88)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 88)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 88)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..88
                     /product="ATP-binding protein"
                     /calculated_mol_wt=9278
     Region          <1..86
                     /region_name="KinC"
                     /note="Sporulation sensor histidine kinase C [Cell cycle
                     control, cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG5807"
                     /db_xref="CDD:444509"
ORIGIN      
        1 mdrdgrlsis sersadsvli kikdtgqgms pevvkglfip fftrkengtg lglvvckril
       61 dscggcllid sqegagteit iqiplvli
//
LOCUS       WP_235241687             327 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235241687
VERSION     WP_235241687.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13407.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..327
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=34647
     Region          55..310
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mnkrckllkm lglcalmlaa aglsacstsq lgnveespir ialvapvhae eqgdamrlga
       61 daaakefave leyisfepme gakeqlsaal qivqkgasav lidpadervl telaasafaa
      121 gapvvalnde rtakgvmaai aidneeagrk ageamaellg gsgtvailrs drsdpdleqr
      181 eagaravlae yagiritdga vcgnsrdacw qaakqlldkg pldgvlalei qaslgvsdel
      241 krreeqgktk ivtfgneleq lellqegiih klvvqngfst gylgvkqava llsgeriekl
      301 tlletkvida dnmfwmnnqk tlfpfvq
//
LOCUS       WP_235241689             552 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Paenibacillus alkaliterrae].
ACCESSION   WP_235241689
VERSION     WP_235241689.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 552)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..552
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=62829
     Region          4..124
                     /region_name="REC_YesN-like"
                     /note="phosphoacceptor receiver (REC) domain of YesN and
                     related helix-turn-helix containing response regulators;
                     cd17536"
                     /db_xref="CDD:381091"
     Site            order(9..12,15..17,20,106..107)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381091"
     Region          172..303
                     /region_name="GGDEF_2"
                     /note="GGDEF-like domain; pfam17853"
                     /db_xref="CDD:465533"
     Region          456..539
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
ORIGIN      
        1 mykvllvdde advreglvqe idwescgftv agtaengrea melaerldpd vvitdismpf
       61 kdglqlsewl rlhhplakiv iltgydefdy arqairlsvd eyllkpfsad sfmelllkik
      121 hkieaevaer edvrqlkehy rtslpllret flaslltrkl pktkieektm nyglrlsgar
      181 ytaavialhp pdetgqegfe yslrysgdld lmlhamlnia reiwesaslg safiyqdsia
      241 llaidaegqd eawlrqtqev ldnvlksivh ylklpvtigm gsvvtdiadv kysfgdalla
      301 ldyrlvlgsg kvifihdven prseklrfde lkeqvlirsl kvgtteelsd avgaifself
      361 dsayayndiq vyllevvtav lrtakdadvd ldelfgagfq lhaeifkfsg lqeaqrwfhd
      421 lclrimkhis skrqhsykdi vekavhytke hfsdseisiq rlcshlhisp gyfsgvfkke
      481 vkmtfvqylm hirmesakel lrttelkafe iaervgfadp nyfsfcfkkq vgispkeyrs
      541 rsiasdeedg da
//
LOCUS       WP_235241700            1988 aa            linear   BCT 02-MAR-2025
DEFINITION  S-layer homology domain-containing protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235241700
VERSION     WP_235241700.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 1988)
  AUTHORS   Mesnage,S., Fontaine,T., Mignot,T., Delepierre,M., Mock,M. and
            Fouet,A.
  TITLE     Bacterial SLH domain proteins are non-covalently anchored to the
            cell surface via a conserved mechanism involving wall
            polysaccharide pyruvylation
  JOURNAL   EMBO J 19 (17), 4473-4484 (2000)
   PUBMED   10970841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012613.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00395.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1988
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..1988
                     /product="S-layer homology domain-containing protein"
                     /calculated_mol_wt=218704
     Region          61..>111
                     /region_name="E_set"
                     /note="Early set domain associated with the catalytic
                     domain of sugar utilizing enzymes at either the N or C
                     terminus; cl28984"
                     /db_xref="CDD:475140"
     Region          <89..138
                     /region_name="X25_BaPul_like"
                     /note="X25 domain of Bacillus acidopullulyticus
                     pullulanase and similar proteins; cl46869"
                     /db_xref="CDD:481209"
     Region          164..249
                     /region_name="X25_BaPul_like"
                     /note="X25 domain of Bacillus acidopullulyticus
                     pullulanase and similar proteins; cl46869"
                     /db_xref="CDD:481209"
     Region          276..395
                     /region_name="E_set_CDase_PDE_N"
                     /note="N-terminal Early set domain associated with the
                     catalytic domain of cyclomaltodextrinase and
                     pullulan-degrading enzymes; cd02857"
                     /db_xref="CDD:199887"
     Site            order(279,355,357,373..374,394..395)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:199887"
     Region          408..984
                     /region_name="AmyAc_CMD"
                     /note="Alpha amylase catalytic domain found in
                     cyclomaltodextrinases and related proteins; cd11338"
                     /db_xref="CDD:200477"
     Site            order(539,541,603,702,769..770,808,810,872..873,934,938)
                     /site_type="active"
                     /db_xref="CDD:200477"
     Site            order(704,772..777,780,810..811,832,856)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200477"
     Site            order(769,808,873)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:200477"
     Region          <1070..1305
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          1810..1851
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          1869..1910
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
ORIGIN      
        1 mplfnrrnka rislivsafi llqlflsafv pltaeaaagg ssisttvtgd viadefvdqp
       61 gganewyiag sfqgwnntas pfahlvgefy aysivldagt hefkftkngt wdglsnggnn
      121 fsltlaertk vnfyindein qarinvagve glsqympvlt adkwprlvgs iqsvfsepew
      181 spsdarqlfv dynfnntvyk lqrniptgqy eakvafgsnw desygynaeg hnlpvaildp
      241 anvtftidys atpkvlsndy kpadgnfdgm invdairfds rsitykkpfg aipegrqdlt
      301 lriaakkddv qvakaeline eslaktydmr kvtsvgdldy feaiipsadf hgigvwgykf
      361 ilvdgpakve ygddgvrggt gkaldegavp fdltvydadf qtpdwmknai vyqiypdrff
      421 dgyegnnrak tvdgyrgdrs edragapinp fplqyfdggv eneptpdqvw gewsdipemp
      481 erltpenapy ysgsktdgiw tnefyggdiq gvqaklnyle sigvtaiyfn piawagsnhk
      541 ydatdynhld pmfgepvynt pgdpksglny datrkasdav fiefaneart rgihiiadgv
      601 fnhvgddsiy fdryekfpei gayeywakvw dhvnddamtq adaeqtvida ftgqlnpatg
      661 vnykypedfe fttwftvhne kvlsrdhvym ykydawwgyd slptmdaiep iegdadalpg
      721 rhewnvpsyr nhvigydlte mtpeeqqtam qntasqvwnw mgasgwrldv apdvsfgtwe
      781 kfrtavksqt gltnangqpi pdpiilgeew gvathyllgn qfdsvmnyrf raalqsfltg
      841 gnaqtmhsal esiredypke awlamlnlvg shdttrnitk mdypqyeenr vgiapdatet
      901 arklqqltai fqmgypgapt vyygdevgle gtkdpdsrrt fpwervseae gqfmgagkya
      961 svfnvykksa eirnnnkvfr tgdikvayaq gdviayarkn sakaglvvin kgvteatiea
     1021 dvagfipngv ifsdqlygta qstvdggkla ltipaltgfm mvnegelaev pvvpnavaag
     1081 dngfvslswd avagaegynv yrapieggel tllsdyqagl tfadntvtng vkyyyavtaa
     1141 igngesaild mvsatpafpi nsvtimgqae dmtigagnst seitiaievn gltdaaanag
     1201 ieapnmiarl ayyadgtdka naadtrlryk edvdgskvyy aafepteagv fryfakvsan
     1261 ngesytesae atfnanadta dttaplvpvl editvesnla slvwtaeged isgfdifrkk
     1321 lsdpgftkia tlantvtnyv dysvsndiqy iykiaafdqs ynrsysaeks vmprlvmvdv
     1381 tlrlhlpayt paqdgiyiag nfngwnssgn elkvpsgats rdvveytfkm magksieyky
     1441 trgtweteaf tshtriandt edlgnwayss tdtnmkltik neggnkmmve dyvlrwvdmp
     1501 mmvsmprisy gedieytaag denrftvkan vpygveftin dvpiadsemd qygnvwvqni
     1561 plepgtntfv lhiapteetl aepwytdkgr agqatktinl tvykaegndd ggstptkpai
     1621 pidpkaeavn pkanpdgkvp vtlpngknkv llpanaeain knnkvevknd kfeavisgev
     1681 ledlksllne telkeanisf eanrvstdea eqlvnkekak aklkmagevf efklvivdkn
     1741 gkemkltkfd ppiemtlhvs dtankdllgm yyiaddgsle yvggeligsk itasirhfsk
     1801 yavleydksf kdvseqyway dvikkmaakh iakgvsdtef apmkpvtrae ftalivralg
     1861 leatkeasfk dvdgsrwyae aaaaayeagi vsgrsndtfa pndtitreem avmivkayev
     1921 kagkqatasi eaefadrtgv svwaqaavha aaelgfiqgr nnnrfvpqgq tnraesaqvi
     1981 sklldsin
//
LOCUS       WP_235241737             526 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235241737
VERSION     WP_235241737.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 526)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 526)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 526)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 526)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..526
                     /product="ATP-binding protein"
                     /calculated_mol_wt=59459
     Region          12..>245
                     /region_name="AcoR"
                     /note="Transcriptional regulator DhaR of acetoin/glycerol
                     metabolism [Transcription]; COG3284"
                     /db_xref="CDD:442514"
     Region          <168..524
                     /region_name="KinA"
                     /note="Sporulation sensor histidine kinase A (Stage II
                     sporulation protein SpoIIF/SpoIIJ) [Cell cycle control,
                     cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG5805"
                     /db_xref="CDD:444507"
ORIGIN      
        1 mtdnhiiiet nercrrlgld phalpvfnkr ysaeeltarr sqykevievi tyfvnkflsa
       61 isgdpffvai ndnegyilef kgdstiietv rqlglaeglq mneelgtnav dlclryrrpv
      121 qllgddhyhk slhrlacyta pfhsedngpi lgtlsimtaa efahshwlal lctivdsier
      181 elllrrqnth lhilnqvlle tkyygvivtd ahgrimemne ngkamlftdd qhrercigss
      241 vfainrigty feeaiihhea cigeeltlwl nesprtymld vvpiydgdhr lirvagslrd
      301 mtdmktaeel lrnteklvfa gqlavniahe irnpmttvqg mlqlsskain pthyslmmse
      361 lerinaivse flilgrpqae qfkkescral lqevvsifel qfemngitmn velgqelmiy
      421 cdsnqikqvf lnilknalea lpfggsvdiv tdfvdsyqri rftdngvgmt eevlqrigdp
      481 fistrpdang lgmmmvnkii tahngrmvia skigdgttve vflpge
//
LOCUS       WP_235241740             437 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235241740
VERSION     WP_235241740.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 437)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 437)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 437)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 437)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..437
                     /product="ATP-binding protein"
                     /calculated_mol_wt=49079
     Region          19..171
                     /region_name="MEDS"
                     /note="MEthanogen/methylotroph, DcmR Sensory domain;
                     pfam14417"
                     /db_xref="CDD:433946"
     Region          <214..435
                     /region_name="BaeS"
                     /note="Signal transduction histidine kinase [Signal
                     transduction mechanisms]; COG0642"
                     /db_xref="CDD:440407"
ORIGIN      
        1 mipssfplte hinvtsgahi lytydqldfy ienavafiqs glqlgqhily vdnkdrsgiv
       61 mdklkelgyg hsipnikymn ssefymvsei ftarkvlqkf tdllkpllds gipirawghv
      121 dwkddsiide eltayececd daanrlgvla vcafssikls aslhlrlmes heyimtdkql
      181 trsslynrtg ntvifpslse htkiqdemdl ykkkldfvqv ishevrnplt vikayasmll
      241 neteslqlna gavkklsdia dyvavidnei ahilnteqml ssealwqtse ipplpilqev
      301 vammetkart qniqlnycvn lsgqetmnsn atglrliisn llsnavkysy edsqvrfqad
      361 csdgmlriei edqgvgmsle qqenlyrkye kmnvdksgqg iglfmvkklv dhfggdihis
      421 sevgrgtlar vglplkn
//
LOCUS       WP_235241554              87 aa            linear   BCT 02-MAR-2025
DEFINITION  pro-sigmaK processing inhibitor BofA family protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235241554
VERSION     WP_235241554.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 87)
  AUTHORS   Resnekov,O.
  TITLE     Role of the sporulation protein BofA in regulating activation of
            the Bacillus subtilis developmental transcription factor sigmaK
  JOURNAL   J Bacteriol 181 (17), 5384-5388 (1999)
   PUBMED   10464210
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019085.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07441.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..87
                     /product="pro-sigmaK processing inhibitor BofA family
                     protein"
                     /calculated_mol_wt=9384
     Region          4..87
                     /region_name="BofA"
                     /note="SigmaK-processing regulatory protein BofA
                     (Bypass-of-forespore protein A) [Cell cycle control, cell
                     division, chromosome partitioning, Signal transduction
                     mechanisms]; COG5848"
                     /db_xref="CDD:444550"
ORIGIN      
        1 mravwlsifi assvlliavv lrnklswswl rgfslhlvla aallyvlnys nlipdmyipi
       61 npvtigtvvt lgipgvaliv glqwavv
//
LOCUS       WP_235241795             337 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-grasp domain-containing protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235241795
VERSION     WP_235241795.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 337)
  AUTHORS   Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Ter-dependent stress response systems: novel pathways related to
            metal sensing, production of a nucleoside-like metabolite, and
            DNA-processing
  JOURNAL   Mol Biosyst 8 (12), 3142-3165 (2012)
   PUBMED   23044854
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026968.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15632.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..337
                     /product="ATP-grasp domain-containing protein"
                     /calculated_mol_wt=38271
     Region          59..323
                     /region_name="PRK12767"
                     /note="carbamoyl phosphate synthase-like protein;
                     Provisional"
                     /db_xref="CDD:237195"
     Region          203..333
                     /region_name="ATPgrasp_Ter"
                     /note="ATP-grasp in the biosynthetic pathway with Ter
                     operon; pfam15632"
                     /db_xref="CDD:434824"
ORIGIN      
        1 mtrvymnrwf svayhyinmi rnnpdgepfe fygthpdinh msllaadhag tepavfgley
       61 vefcvdfckr nsidifiprl hmeeisryvh lfdeigtkvm vcrdiqllds miekdkfyea
      121 ladknlvsip dyrvvntaae fkrayeelta aghkvcfkpt kseggmgfri innernplre
      181 lygyvtlstt fkqayetlss tdrfdslmvm ellegieysi dcvataegel ltaiprrkst
      241 grtylleetp elldianria kalripyafn iqvryshgvp klleinprms gglyitclsg
      301 vnmpylavqa lqgkaiappv prfgiqagyv eqplimk
//
LOCUS       WP_235241844             197 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6143 family protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235241844
VERSION     WP_235241844.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039668.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19640.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..197
                     /product="DUF6143 family protein"
                     /calculated_mol_wt=21614
     Region          26..192
                     /region_name="DUF6143"
                     /note="Family of unknown function (DUF6143); pfam19640"
                     /db_xref="CDD:466135"
ORIGIN      
        1 mfrnsnhmve ythvikdgea mypqvpvsvv nltnphiksl qgkyflgetd qlnptdsnrt
       61 wgalinpphs gvhlyfdvyv lsnlsddnlv sqicfcsslp qhgkqshevs tanlamhpkt
      121 vpqgqiqfgs hldtsaleav pvstrvipay stvssekagh wiigpgrail ftltsamdhp
      181 apsvisfgww eeargmy
//
LOCUS       WP_235241868             266 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Paenibacillus alkaliterrae].
ACCESSION   WP_235241868
VERSION     WP_235241868.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024793.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13401.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..266
                     /product="AAA family ATPase"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=30750
     Region          7..261
                     /region_name="COG2842"
                     /note="Bacteriophage DNA transposition protein, AAA+
                     family ATPase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442090"
ORIGIN      
        1 mnktqkfiet keykkfaefc dacikykyig icyglpgvgk tlssryysnw dsiekqlayk
       61 pgndadekil eartifytap avratkmteq infigyrmdk vktaykvlke gakenypana
      121 yedidliivd eidrlkvqnl eqlrdifdrn diamiligmp gienrlaryp qlysrigfah
      181 efaklskdei hhileykwee lgplikledf sdyeaitsii kitggnfrli qrlftqieri
      241 leinklqtit tevveaards lvigik
//
LOCUS       WP_235241928             183 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6886 family protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235241928
VERSION     WP_235241928.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF045466.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21820.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..183
                     /product="DUF6886 family protein"
                     /calculated_mol_wt=21437
ORIGIN      
        1 mlfhfseepn ikvfkprqsk afphiepavw aidkshklhy cfprdcprvi ywkaewtnee
       61 dlnrffgess vdkiivvenq wlecirnvkl ymytfpdetf klfeeaktag yyishheitp
      121 ikveqvedli gklvseniel rftpdlypir nkvvastldf siirfsnakk dfvskpeegs
      181 nsa
//
LOCUS       WP_235241979             373 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235241979
VERSION     WP_235241979.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..373
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=40088
     Region          58..326
                     /region_name="PBP2_Fbp_like_5"
                     /note="Substrate binding domain of an uncharacterized
                     ferric iron transporter, a member of the type 2
                     periplasmic binding fold superfamily; cd13551"
                     /db_xref="CDD:270269"
     Site            order(197,199,240..242,259,262..263)
                     /site_type="other"
                     /note="putative chemical substrate binding site [chemical
                     binding]"
                     /db_xref="CDD:270269"
     Region          <294..373
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mkksvisali lilclvvtac gnsnggnagq stagsngsga tdqatsepka tepvknekli
       61 vytnansdgr gewliekaks agfeielvga ggadltnrli aeknnpiadv vfglnnmlye
      121 nlkkeevliq ytpkwageve aglndpegyy hglvkqaili gynpdtftve tapkdwtdly
      181 kneafkgkye aptllgqntp rlivagiltr hldpngdlgv seegwneikq lydngvgave
      241 gedfyanlas gktpigpvvs gtlgkkeeqy kvkagivspe igvpmiveha aiikgtkkqe
      301 taerfvewmg taevqgefaa qfnampantk aaeqaneavk qlystlkaqa ldwglianni
      361 dqwvekielq imq
//
LOCUS       WP_235241757             160 aa            linear   BCT 02-MAR-2025
DEFINITION  FixH family protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235241757
VERSION     WP_235241757.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 160)
  AUTHORS   Zhang,X.Z., Yan,X., Cui,Z.L. and Li,S.P.
  TITLE     [Recombinant expression and secretion of mpd gene using the
            promoters and signal peptide-encoding sequences of ytkA and ywoF
            gene from Bacillus subtilis]
  JOURNAL   Sheng Wu Gong Cheng Xue Bao 22 (2), 249-256 (2006)
   PUBMED   16607952
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13115.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..160
                     /product="FixH family protein"
                     /calculated_mol_wt=17213
     Region          1..>72
                     /region_name="T6SS-SciN"
                     /note="Type VI secretion lipoprotein, VasD, EvfM, TssJ,
                     VC_A0113; cl01405"
                     /db_xref="CDD:470189"
     Region          40..116
                     /region_name="YtkA"
                     /note="YtkA-like; pfam13115"
                     /db_xref="CDD:432981"
ORIGIN      
        1 mniniqrmal lgvilflgvl lsgctakiae tdasglpahl tvglhipkql dignksnfsv
       61 evfknnqple kaeqaefifw pegnreaavt vkatesspgv ysvshsitme giylvqssis
      121 gkndkvlpik rfavgskave rliqmesske ssdnshnghh
//
LOCUS       WP_235241999             260 aa            linear   BCT 02-MAR-2025
DEFINITION  enoyl-CoA hydratase-related protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235241999
VERSION     WP_235241999.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012596.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00378.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..260
                     /product="enoyl-CoA hydratase-related protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=28754
     Region          13..260
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     Site            order(24,26,59,63..67,106,108..110,132..133,136)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(65,110)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(90,98,119..122,134..137,143,145..147,149..150,
                     155..156,158..159,161..162,165,176,179,195,198..199)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
ORIGIN      
        1 mnrpvlweqh gpigyirlnr pealnafnyd mlvalgeive tieqnprdir viilsgegra
       61 fcsgadlker rtlddqqirr nvmktsevfs tferlpqpti aaingyafgg gmelalccdf
      121 rysireakmg ltevslgiip gaggtqrlpr ligpskakel iltarkisad qalglgllng
      181 vaddreqlke mseglaaeil anaplavyqa kyaidkgmnt dldmgmdlef kayeatiatk
      241 drlealeafr ekrsprytre
//
LOCUS       WP_235242005              66 aa            linear   BCT 02-MAR-2025
DEFINITION  SMODS domain-containing nucleotidyltransferase [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235242005
VERSION     WP_235242005.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 66)
  AUTHORS   Burroughs,A.M., Zhang,D., Schaffer,D.E., Iyer,L.M. and Aravind,L.
  TITLE     Comparative genomic analyses reveal a vast, novel network of
            nucleotide-centric systems in biological conflicts, immunity and
            signaling
  JOURNAL   Nucleic Acids Res 43 (22), 10633-10654 (2015)
   PUBMED   26590262
REFERENCE   2  (residues 1 to 66)
  AUTHORS   Davies,B.W., Bogard,R.W., Young,T.S. and Mekalanos,J.J.
  TITLE     Coordinated regulation of accessory genetic elements produces
            cyclic di-nucleotides for V. cholerae virulence
  JOURNAL   Cell 149 (2), 358-370 (2012)
   PUBMED   22500802
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037736.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18144.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..66
                     /product="SMODS domain-containing nucleotidyltransferase"
                     /calculated_mol_wt=7479
     Region          2..>56
                     /region_name="SMODS"
                     /note="Second Messenger Oligonucleotide or Dinucleotide
                     Synthetase domain; cl39525"
                     /db_xref="CDD:477034"
ORIGIN      
        1 mlatafenyc tgleidnmds ilnryseivk rlnksywdie dedehgylvg slgrhtvfvk
       61 ivvani
//
LOCUS       WP_235241807             303 aa            linear   BCT 02-MAR-2025
DEFINITION  YIEGIA domain-containing protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235241807
VERSION     WP_235241807.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 303)
  AUTHORS   Decatur,A. and Losick,R.
  TITLE     Identification of additional genes under the control of the
            transcription factor sigma F of Bacillus subtilis
  JOURNAL   J Bacteriol 178 (16), 5039-5041 (1996)
   PUBMED   8759874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025411.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14045.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..303
                     /product="YIEGIA domain-containing protein"
                     /calculated_mol_wt=33841
     Region          14..288
                     /region_name="YIEGIA"
                     /note="YIEGIA protein; pfam14045"
                     /db_xref="CDD:433670"
ORIGIN      
        1 megndmisaq ylvmivtatl agtlaratti kldyrqypsh pngylihflt galaaalgaf
       61 ivptlmtknf vavtflslgi qqfrevrkte reslrdlegt eytlrgdsyi dgiaktfear
      121 nyfallvafa vsvtmqllql sdwieitagi ivgllffvfl rrftsgkhvk diatitqgni
      181 eikgselyvd gmlvsnaage aeakqffaee giaavvhpre phlrivlehf gqrqamlfev
      241 traigkkryc yqnlmegkvi ivlvpivhnf ellretllnt plletvkkth rllntnitge
      301 rsk
//
LOCUS       WP_235242041             461 aa            linear   BCT 02-MAR-2025
DEFINITION  DDE-type integrase/transposase/recombinase [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235242041
VERSION     WP_235242041.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 461)
  AUTHORS   Dyda,F., Hickman,A.B., Jenkins,T.M., Engelman,A., Craigie,R. and
            Davies,D.R.
  TITLE     Crystal structure of the catalytic domain of HIV-1 integrase:
            similarity to other polynucleotidyl transferases
  JOURNAL   Science 266 (5193), 1981-1986 (1994)
   PUBMED   7801124
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012870.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00665.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..461
                     /product="DDE-type integrase/transposase/recombinase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=52667
     Region          54..280
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
     Region          345..399
                     /region_name="Mu-transpos_C"
                     /note="Mu transposase, C-terminal; pfam09299"
                     /db_xref="CDD:430512"
ORIGIN      
        1 mdsslqeqma afrysliapi vsrqtplapg elkaylaqaa sqvyhipgst kthvsvrsle
       61 rwlnqyrrge wnglkpkari rktnlsippa vlqeairlrk erpersvdqi ifileesgka
      121 eagtvaastl srhlrkagas rkellaegve kgfrrfeaed ahlswqfdfq htlylpdpkd
      181 pkkrkkailf ailddysryi vhaefywdek lprmedslkk ailkhgipsq fycdngsafs
      241 shhlvricgk lgiqlshstv rrpagrgkie rwfrfidtsf kpeayalieq grlmtladln
      301 aalaawldgy yhirehgstk qspkvrlssc eremrrktla elteiflwee qrtadktgcv
      361 sldgntyevd lelcrkrvll rydpfdlsci qvwyedkrya datvvdlarp ydrrvnpepa
      421 aplvvepdgq vaflelaeqk rqaqwtsepv syataggddt q
//
LOCUS       WP_235242042             256 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6431 domain-containing protein [Paenibacillus alkaliterrae].
ACCESSION   WP_235242042
VERSION     WP_235242042.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040103.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20020.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..256
                     /product="DUF6431 domain-containing protein"
                     /calculated_mol_wt=29100
     Region          85..>167
                     /region_name="transpos_ISL3"
                     /note="ISL3 family transposase; NF033550"
                     /db_xref="CDD:468079"
ORIGIN      
        1 maaerisvcl ensglqrhgg lirlhnvtir vckggyrcpc csevfsecrt esqqpplplw
       61 hqdlmhylal vskhgipedd rpkqcpkccq skrkphrhsh yerivmtvtc pekicifrfr
      121 cpdcgyvhsv ipaflepymq maldlqeelv gaahqgatve qvaeqtqalp cgsidertia
      181 slirgwnqrl aqlesglwaw mlaraphlal prssslwntl htawtiirer ipelrnirfl
      241 hglnrlhfsm tvtahg
//
LOCUS       WP_235242049              96 aa            linear   BCT 02-MAR-2025
DEFINITION  DeoR family transcriptional regulator [Paenibacillus alkaliterrae].
ACCESSION   WP_235242049
VERSION     WP_235242049.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019826.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08220.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..96
                     /product="DeoR family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=10892
     Region          14..>84
                     /region_name="GlpR"
                     /note="DNA-binding transcriptional regulator of sugar
                     metabolism, DeoR/GlpR family [Transcription, Carbohydrate
                     transport and metabolism]; COG1349"
                     /db_xref="CDD:440960"
ORIGIN      
        1 myeehcisps cpyvheatiq rdlseieleg slkrthggvi meewtndepp fnerssqnld
       61 qkmrigkmaa slvedgdhii idsgralsfq lyvkwn
//
LOCUS       WP_235242124             306 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Fusobacterium
            mortiferum].
ACCESSION   WP_235242124
VERSION     WP_235242124.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 306)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..306
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=35768
     Region          1..241
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(7,9..10,12,31..33,59..61,94..96,123,127,148..151)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187575"
     Site            order(73,96,123,127)
                     /site_type="active"
                     /db_xref="CDD:187575"
ORIGIN      
        1 mkilvlggnq flgktlckkl lelghrvyal nrgtrenplg vihlkadrnn teelkkvvsn
       61 ididividis gyepkqveif ykvmkenfkq yiyissasiy nnvqsypine devigkneiw
      121 gvyaenkyls emkikelfkk tfytifrpfy iygignnlnr enyifsrien nlpiylpnkg
      181 eeivqfgyvd dlvnaiiysf nnkefynnif nisgneavtf nqyvkicgkv akkdvkikyv
      241 nleikklkar dwfpfrdvhl fgninkvlat gfknkytlfe glsltynylk nnklleypsl
      301 ynieke
//
LOCUS       WP_235242093             243 aa            linear   BCT 02-MAR-2025
DEFINITION  Mu transposase domain-containing protein [Paenibacillus
            alkaliterrae].
ACCESSION   WP_235242093
VERSION     WP_235242093.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus alkaliterrae
  ORGANISM  Paenibacillus alkaliterrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 243)
  AUTHORS   Rice,P. and Mizuuchi,K.
  TITLE     Structure of the bacteriophage Mu transposase core: a common
            structural motif for DNA transposition and retroviral integration
  JOURNAL   Cell 82 (2), 209-220 (1995)
   PUBMED   7628012
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046294.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22483.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Paenibacillus alkaliterrae"
                     /db_xref="taxon:320909"
     Protein         1..243
                     /product="Mu transposase domain-containing protein"
                     /calculated_mol_wt=27724
     Region          <2..39
                     /region_name="transpos_IS21"
                     /note="IS21 family transposase; NF033546"
                     /db_xref="CDD:468077"
ORIGIN      
        1 meeanaylle vcerlnnkpq drregksata cleeerpflf gglpmfdaar vvharvdkya
       61 tvvvdqnhys vpdhlvgkli mvkiysgriq cfyeemkiae hnrlvgchew rlellhylet
      121 lkkkpgalag stalaqaqsh ikniyetyys rrekdfiell qyirddanle evqrsikqld
      181 nlhpshvttd kvkalcakgr emdappllhs qasqailqqa aaqlrqyddm fgthtiqmee
      241 aia
//
LOCUS       WP_235242215             782 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Fusobacterium mortiferum].
ACCESSION   WP_235242215
VERSION     WP_235242215.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 782)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 782)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..782
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=86979
     Region          3..489
                     /region_name="LdcC"
                     /note="Arginine/lysine/ornithine decarboxylase [Amino acid
                     transport and metabolism]; COG1982"
                     /db_xref="CDD:441585"
     Region          503..778
                     /region_name="Arginase"
                     /note="Arginase family; cd09989"
                     /db_xref="CDD:212515"
     Site            order(587,609,611,613,615,626..627,665,668,711,713,756)
                     /site_type="active"
                     /db_xref="CDD:212515"
     Site            order(662,664,669,672..673,681..683,685..688,691..692,695,
                     728..735,741)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:212515"
ORIGIN      
        1 mskldqsktp lfsvlkdvya grdilpfhvp ghkrgkgvdk efydfmgngp fsidvtifkm
       61 vdglhqpksy ikeaqelaad aygvkqsffa vngtsgaiqa mimsvikage kilvprnvhk
      121 svsagiilsg sepiymnpev deelgiahgv rpqtvenmlk qhpdikavli inptyygvat
      181 dikkiadivh sydiplivde ahgphlhfhd dlpisavdcg adictqsthk iigamtqmsl
      241 lhvnsdrvdv nrvkqilsll httspsyplm asldcarrqi ategkelldk aiklakrfrt
      301 evnripgmsc fgeeivgreg vfafdptkit itakelgltg aeletilted yniqmelsdf
      361 ynvlglitig dtdesvdkli nalkdiseky ygkgnklkre flkmppipeq vlnpreafys
      421 eknkvlfses egkicgemim ayppgipvit pgerisaeii dyindlreae lhvqgmedpe
      481 lvtinvieee davylytekm kskmfgvpin lgankagief gidvlcetyp dtfdeieiid
      541 vekqkenfne wnlkykntil htceklavsv neavrdgyrp iviggdhsia lgsisgvsle
      601 keigvvwida hgdmntdest isgnihgmpl allqgagdrd lvncfyegak idsknvvilg
      661 ardldfkere vidqlgvkvi yhdevlqkgl drvleeihey lkvdnlhisf dvdsvnpela
      721 pgvstpvrng fttdevfqtf kflfknyfvt svdivefnpv ndknnktvnf vnelteyvin
      781 pd
//
LOCUS       WP_235242233            1057 aa            linear   BCT 02-MAR-2025
DEFINITION  P-loop NTPase fold protein [Fusobacterium mortiferum].
ACCESSION   WP_235242233
VERSION     WP_235242233.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 1057)
  AUTHORS   Aravind,L., Iyer,L.M., Leipe,D.D. and Koonin,E.V.
  TITLE     A novel family of P-loop NTPases with an unusual phyletic
            distribution and transmembrane segments inserted within the NTPase
            domain
  JOURNAL   Genome Biol 5 (5), R30 (2004)
   PUBMED   15128444
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019313.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07693.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..1057
                     /product="P-loop NTPase fold protein"
                     /calculated_mol_wt=125444
     Region          23..368
                     /region_name="KAP_NTPase"
                     /note="KAP family P-loop domain; cl46386"
                     /db_xref="CDD:480726"
     Region          <639..1054
                     /region_name="COG3292"
                     /note="Periplasmic ligand-binding sensor domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:442521"
ORIGIN      
        1 msknkflsdk pegidsfqsq ahtkianvia evikkgeikl iglegewgsg ksnivkllek
       61 ilsgeeyify tydawghqed lqrrsflenl teimknkfnh kdwkkkldsl latktkteqk
      121 eipkfsniii fisvilylni kiklsdlski egfknklihe vfynnipfwi glivialyff
      181 kqklidkkni kledliylyk gktlntdyet itstkeptvr qfkewmtdid dtlrknkkkl
      241 lviydnidrl qenkvkevws sihtffsedd ydnifviipf skkhiltafk gkdnevnegi
      301 iektfpvvyn vtppvlvdwk nyfnenleli fpnineedkn virtlynknv ekitprgiks
      361 finelkvlns vhtnielkyi slfvlikeki qadfpnyfyg eefskyrril gndtdkkiia
      421 lyfgidekda iqvlleremi knlengnfsk ideqsqisgf nevlqkvitd lygdgelqri
      481 yrkalvaikn qkvnsfilds fldsfkseek tfsfqeyhki llekcslkee eifkellsid
      541 fysgdetqni kslcdelkel enymkeknyd fskyikvrky qpviffqmle efkffyeyyg
      601 isfiekdmed ylsynlksfs ekdmenlefl lddynfyelk enlalriqed renkvtlney
      661 kvftklaikn qekglnlgin fnrdvlsnql sklssnyssf gkekyyiisl ilnyvsynvn
      721 qsssisnfsy ildsisdydi eeieklliny veidklilml knykdrrfsk kiieillkek
      781 nmtdleieni ikeysqikll ipnelkkdff evlnkfynqp fnfdytnivs esslkdilld
      841 skefdlklvk dlqelfvkyf nqenkmnfly qdyqnrndnv ssiyeiivdn knldinlsvi
      901 nevkkilihl idnphnltek yknilkille ripseelest inndikgkil gktsinfeif
      961 ksfykvfekt kffyfneedf ikqskkddyn klikvlilpy vnteevkefi leciefkngl
     1021 kllkgsnrel iekikstykq draiqnfiae lnekgdq
//
LOCUS       WP_235242335             298 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Fusobacterium mortiferum].
ACCESSION   WP_235242335
VERSION     WP_235242335.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 298)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 298)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025054.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13673.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..298
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=35140
     Region          150..298
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
     Site            order(230..232,242..243)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
ORIGIN      
        1 msyilkevvl rtnntpegme kisqlwgdil skkisllpen knelliskys nyesdengey
       61 dltimrrelk fllkldervk nrefikyeei ddniencark vwnrvwedkk nnklnrvyie
      121 dyqldilpif sqdgkchsil yisvkeenti kirkykssdc qeitelfynt vhsinkkdyt
      181 qeqldvwatk nidiekwdts flknytvvae sngiivgfgd iaedgyldrl yvhkafqrig
      241 iatmicdkle nkvkgkplyt hasitakpff ikrgykvikq qlveregill enyvmekr
//
LOCUS       WP_235242365             378 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme [Fusobacterium
            mortiferum].
ACCESSION   WP_235242365
VERSION     WP_235242365.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..378
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /calculated_mol_wt=41479
     Region          2..374
                     /region_name="am_tr_V_EF2568"
                     /note="cysteine desulfurase family protein; TIGR01977"
                     /db_xref="CDD:131032"
ORIGIN      
        1 miyfdnaatt lhkpqeviea vikamssmgn agrgntsasm eathtvfdtr enlakffnik
       61 dssriaftcn stealniaik gifkngdnii ttmlehnsvl rplyemeekg velsfvkadk
      121 lgnisyekme sfiknntkai icthgsnltg nlidikrvge ickkynllfi vdasqtagvf
      181 pidvedmnid ilcftghksl lgpqgtggif vregveikpl ksggtgilty sksqpqimpt
      241 yleagtlngh giaglnagie finkigmnki rekedslmwr fyngvknlsh ikiygdfskk
      301 ercpivtlni geydsgdiae ellnlgistr agghcaplmh ealgtveqga vrfsfgyfnt
      361 eeevdkviei lkniinei
//
LOCUS       WP_235242450             119 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Fusobacterium mortiferum].
ACCESSION   WP_235242450
VERSION     WP_235242450.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 119)
  AUTHORS   Curcio,M.J. and Derbyshire,K.M.
  TITLE     The outs and ins of transposition: from mu to kangaroo
  JOURNAL   Nat Rev Mol Cell Biol 4 (11), 865-877 (2003)
   PUBMED   14682279
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016847.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04986.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         <1..119
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <1..102
                     /region_name="transpos_IS91"
                     /note="IS91 family transposase; NF033538"
                     /db_xref="CDD:468069"
ORIGIN      
        1 kvtfyyedls nnkekvevtm eveeflskli ihippknfkm irrfgiysrn ikkelkfiis
       61 kikkyklqyt kttfyqleiw ktfginpfyc fnckikmkvr risyfniskg sicwkeycw
//
LOCUS       WP_235242480             309 aa            linear   BCT 02-MAR-2025
DEFINITION  siderophore ABC transporter substrate-binding protein
            [Fusobacterium mortiferum].
ACCESSION   WP_235242480
VERSION     WP_235242480.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 309)
  AUTHORS   Delepelaire,P.
  TITLE     Bacterial ABC transporters of iron containing compounds
  JOURNAL   Res Microbiol 170 (8), 345-357 (2019)
   PUBMED   31678562
REFERENCE   2  (residues 1 to 309)
  AUTHORS   Kawano,H., Miyamoto,K., Sakaguchi,I., Myojin,T., Moriwaki,M.,
            Tsuchiya,T., Tanabe,T., Yamamoto,S. and Tsujibo,H.
  TITLE     Role of periplasmic binding proteins, FatB and VatD, in the
            vulnibactin utilization system of Vibrio vulnificus M2799
  JOURNAL   Microb Pathog 65, 73-81 (2013)
   PUBMED   24135791
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11468490
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..309
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=34187
     Region          22..307
                     /region_name="CeuA"
                     /note="ABC-type enterochelin transport system, periplasmic
                     component [Inorganic ion transport and metabolism];
                     COG4607"
                     /db_xref="CDD:443657"
ORIGIN      
        1 mkkiivgiiv vfiafigfmy ikssenqgae vekvviehsl gsvevpknpk rvvvfdygil
       61 dildtlganv iglprdmvpe hlskyssdky anlgslkepn lekiyeakpd liivagrqrd
      121 fysslskvap tifvetsstd ymkglktnid iltkvfdnsq mlnekyaeie srvnsikakv
      181 eekgynamvl lsnngriaay geksrfsify dylgfkttge vvasthgnkv tfeylleknp
      241 dyiyivdkaa vvgdnllank afdnpivkst kaaqngnivf lnsvvwytas gglksteiml
      301 deveksvsk
//
LOCUS       WP_235242490             644 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase family protein [Fusobacterium mortiferum].
ACCESSION   WP_235242490
VERSION     WP_235242490.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04851.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..644
                     /product="DEAD/DEAH box helicase family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=75842
     Region          2..135
                     /region_name="PLDc_SF"
                     /note="Catalytic domain of phospholipase D superfamily
                     proteins; cl15239"
                     /db_xref="CDD:472788"
     Site            order(80,82,98,100,111)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197299"
     Site            80
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197299"
     Region          88..>513
                     /region_name="SSL2"
                     /note="Superfamily II DNA or RNA helicase [Transcription,
                     Replication, recombination, and repair]; COG1061"
                     /db_xref="CDD:440681"
ORIGIN      
        1 myeslkksiq esdeiimnvs firdsgmkll ikdlkeaker gkrikiltsy mkvtepnaly
       61 rlleiggvki fdnpfnksfh pktyifkrkd dfeiyvgssn isysalisgv ewnynfvsgq
      121 ndevkeilde ftelyernsf eltlqwlrey ekrykkseyg eifdnqekrs deviepikfq
      181 ipalyelskt reegykkami vvgtglgkty lavfdsmnfk rvlfiahrde ilrgarnsfe
      241 svyrdsrsyg yfnalekesk kdivfasist lskseylrde wfakdsfdyi vvdefhhsss
      301 ksylkvlnyf qpqfllglta tpdradngdi yklcdyniay ecdfrvginn dwlvpfeyyg
      361 iyddtdysli pwrsgkydle alenalviek rldlvfkkym ehrkkstvgf casikhcevm
      421 nqyfrkqgvk seiiigetpi skrqeiigkf kereievift vdifnegvdi pcidtllflr
      481 ptlsytifiq qlgrglrtfe gkdsvrvldf vgnykgaelr plfltgnykk gkgvinttdk
      541 efllpegcsv efnfklieyf ekfkrksirq eelvkldykn lmetlervpt lmdtytfgei
      601 pvhmyiktfk cfpqyrdrvv eifqtsdvra gredekwfni ffek
//
LOCUS       WP_235242159             174 aa            linear   BCT 02-MAR-2025
DEFINITION  siphovirus Gp157 family protein [Fusobacterium mortiferum].
ACCESSION   WP_235242159
VERSION     WP_235242159.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 174)
  AUTHORS   Foley,S., Lucchini,S., Zwahlen,M.C. and Brussow,H.
  TITLE     A short noncoding viral DNA element showing characteristics of a
            replication origin confers bacteriophage resistance to
            Streptococcus thermophilus
  JOURNAL   Virology 250 (2), 377-387 (1998)
   PUBMED   9792848
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017386.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05565.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..174
                     /product="siphovirus Gp157 family protein"
                     /calculated_mol_wt=20027
     Region          5..174
                     /region_name="Sipho_Gp157"
                     /note="Siphovirus Gp157; pfam05565"
                     /db_xref="CDD:398934"
ORIGIN      
        1 mneltlygis kemiameelw emaideetge ikdaalleel qqgiettlke ksadivkyyk
       61 nrdsliknid eeiekleklk klgkkkqenf enyikmcmek mgvkkietpn gnitwsagre
      121 svdyfdetlv pdeyrvekvk vtkeisktli keaikkgekv pgaflirkst inik
//
LOCUS       WP_235242193             270 aa            linear   BCT 02-MAR-2025
DEFINITION  head fiber protein [Fusobacterium mortiferum].
ACCESSION   WP_235242193
VERSION     WP_235242193.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 270)
  AUTHORS   Tao,Y., Olson,N.H., Xu,W., Anderson,D.L., Rossmann,M.G. and
            Baker,T.S.
  TITLE     Assembly of a tailed bacterial virus and its genome release studied
            in three dimensions
  JOURNAL   Cell 95 (3), 431-437 (1998)
   PUBMED   9814712
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022583.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11133.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..270
                     /product="head fiber protein"
                     /calculated_mol_wt=28945
     Region          <149..185
                     /region_name="Phage_head_fibr"
                     /note="Head fiber protein; pfam11133"
                     /db_xref="CDD:431670"
ORIGIN      
        1 menldtrvae ilasgkkiid evaydllake iialiktkae sshthsadqv tetdskkfvs
       61 pqekktwgdk vsqeqltaai ntfasglafk gvyetlealn tkitqpqegy mviitkepty
      121 sgkntiliye gdptnkwqtv gelfvpglat qsqdglmske dkkkldglnn ytlpvanttt
      181 lggvkakngg pitiggdgti diaseklvgt gerdkwnkaa ndstsalqka ttnernittl
      241 ggkvtgveta lnntmteeea qaiinkykga
//
LOCUS       WP_235242535             524 aa            linear   BCT 02-MAR-2025
DEFINITION  PTS transporter subunit EIIC [Fusobacterium mortiferum].
ACCESSION   WP_235242535
VERSION     WP_235242535.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 524)
  AUTHORS   Reizer,J., Paulsen,I.T., Reizer,A., Titgemeyer,F. and Saier,M.H.
            Jr.
  TITLE     Novel phosphotransferase system genes revealed by bacterial genome
            analysis: the complete complement of pts genes in mycoplasma
            genitalium
  JOURNAL   Microb Comp Genomics 1 (3), 151-164 (1996)
   PUBMED   9689210
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02378.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..524
                     /product="PTS transporter subunit EIIC"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /calculated_mol_wt=56274
     Region          10..522
                     /region_name="PTS-II-BC-glcB"
                     /note="PTS system, glucose-specific IIBC component;
                     TIGR02002"
                     /db_xref="CDD:273923"
ORIGIN      
        1 meekvslkds fvgigqklgk aimmpisilp vaglflgiaa alssgavika ysvldnsflq
       61 glfklmnavg ngvfgalpli favgiaagla kaekgsagls avvgyfvllt gtgafmsilg
      121 keapagadir lygqamqfgi ktlnmnvfgg vlagivtgvv hnkyyktklp dvlaffggar
      181 fvpivntvvf mgislvmvfi wpavanmisy fgtiteglgl vgafiyglil rsfyviglhh
      241 vfylpfwtta aggtleiggk viegwqtifl aqladpntth yfsnialyns gryfhmlftm
      301 pavclamyra ipagpkrkat fgflfsialt afitgvtepi sfallfaspl lfvaeaisfa
      361 isfviaamak vtigstfsag lvefllfgvf qgntktnwiw iviwgipifi anyflfklli
      421 eklnaktpgr esdeeaekkl snkyqagqak tivealggld niddldncat rlrvtvkkld
      481 kvniellkqt gahnvvtrgk nlqviygptv nlirteidey istl
//
LOCUS       WP_235242694             226 aa            linear   BCT 02-MAR-2025
DEFINITION  4Fe-4S dicluster domain-containing protein [Fusobacterium
            mortiferum].
ACCESSION   WP_235242694
VERSION     WP_235242694.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024247.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12838.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..226
                     /product="4Fe-4S dicluster domain-containing protein"
                     /calculated_mol_wt=25009
     Region          14..>164
                     /region_name="PRK06259"
                     /note="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit; Provisional; cl49634"
                     /db_xref="CDD:483974"
     Region          <91..>164
                     /region_name="HCP_like"
                     /note="The HCP family of iron-sulfur proteins includes
                     hybrid cluster protein (HCP), acetyl-CoA synthase (ACS),
                     and carbon monoxide dehydrogenase (CODH), all of which
                     contain [Fe4-S4] metal clusters at their active sites.
                     These proteins have a conserved...; cl23739"
                     /db_xref="CDD:474039"
ORIGIN      
        1 maekqmvdvf ilgkkysvps iltimdamey agyqlirgcg crsgfcgaca tiyrtkgene
       61 lkvvlacqsq vedgmyltqi pffpgkkavy dmdkieptae tmgelypely kcigcnactk
      121 gcsqglnvmq yiayaqrgef ekcaeesfdc vgcgicasrc pagithynvg llarritgky
      181 ialeskhlae rvqeikdgkm daeldelmsk sidelkdlyn hrdiak
//
LOCUS       WP_235242732            1014 aa            linear   BCT 02-MAR-2025
DEFINITION  tape measure protein [Neisseria gonorrhoeae].
ACCESSION   WP_235242732
VERSION     WP_235242732.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040129.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20155.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..1014
                     /product="tape measure protein"
                     /calculated_mol_wt=108055
     Region          109..298
                     /region_name="TMP_3"
                     /note="Tape measure protein; pfam20155"
                     /db_xref="CDD:466312"
     Region          <352..508
                     /region_name="COG5412"
                     /note="Phage-related protein [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:444167"
     Region          <617..>801
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
ORIGIN      
        1 msdleakvri tvenhtkqgf dsaaadadka aekmrssgdn aakgfkaaid smhetmrnlh
       61 advkagfeaa gnqaqqasek vraevgkigs glsgltklla glatadfaks vldtadamqs
      121 insqvrqvts seteylavqq qlldtanrtc aslestanly vstsralkdy gytqqeilkf
      181 teatnnamti ggvgaqqqaa allqlsqalg sgvlqgdefk siseaapill dtiaeymgks
      241 rdeikklgse gkltadvifk aisgasekfg eqaakmpvtm gqaltvfsnn wqsmvsklln
      301 dsgtmsgiaa vikliadnln lvvpivagfa vavaaavapt lalnlallan pfgiiavaig
      361 tvvgliakfg deidvfgggw snlsdvirav wqiitetvge avgtvkswfd gltgrlnega
      421 ggwpslfgrv msvissaiga yvnvyinifa tgwmlikeaa ndmpqffanl gkaignvfis
      481 aierminkav gminsmidfa nkaasmagis gigklnkvrm grmddgglge rihdsltkdr
      541 agamanavre raadiheada lkgrggggha ktarkkpgan qgggkggksr sggpgaakdp
      601 mqawegeika rklahremqr etlthqewdl areaeywrak latvdangkt gvkirekilt
      661 ledqlskqst eakmnqaaew ekldkhklem ekdaadqala dgrisqlerl dleiefenrr
      721 yqiaydalqe rialaeqdpa ysqaaigklk aqmgelgrgh ertqaknegk renqrrkdap
      781 nvmemlqdgg rnvwqeaqqq mgqaftamla raqnfrqamn gffksmgqtf iqemvtkplt
      841 glmrrmvees aiykmifgtk etletaaaak taatkatett avvssnavqa asgaaasqah
      901 ipyvgpilav aamaammsav mglmggggsq ttttttrips aaggwdipag inpltqlhen
      961 emvlpaehaq tiremadqqg ggstviinst ggdfihkndl akllkqmkrd fkfv
//
LOCUS       WP_235242715             270 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235242715
VERSION     WP_235242715.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 270)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 270)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..270
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=29909
     Region          92..270
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mnparkkpsl lfssllfssl lfssllfssa aqaasegngr gpyvqadlay aaerithdyp
       61 eataqkkgtt istvsdyfrn irthsvhprv svgydfgswr iaadyaryrk wkesnssikk
      121 vtedikdnhr etqtkhqgng sfhaasslgl saiydfklnd kfkpyigarv ayghvkhqvh
      181 sveskntivt skqtrnalrg gsvptgfvpq payhksrsis slgfgavagv giditpkltl
      241 dagyryhnwg rlentrfkth easlgmryrf
//
LOCUS       WP_235242761             231 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235242761
VERSION     WP_235242761.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 231)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 231)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..231
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=26051
     Region          48..231
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaye hitrdypdaa gankgkistv sdyfrnirth sihprvsvgy dfggwriaad
       61 yaryrkwnnn kysvsikell rndnsggqln ikhqktehqe ngtfhavssl glstvydfrp
      121 ndkfkpyiga rvayghvrhs idstkktiev ttvpsnapng avttyntdpk tqndyqsnsi
      181 rrvglgviag vgfditpklt ldagyryhnw grlentrfkt heaslgvryr f
//
LOCUS       WP_235242769             224 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Fusobacterium mortiferum].
ACCESSION   WP_235242769
VERSION     WP_235242769.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..224
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=25374
     Region          2..>129
                     /region_name="AtoC"
                     /note="DNA-binding transcriptional response regulator,
                     NtrC family, contains REC, AAA-type ATPase, and a Fis-type
                     DNA-binding domains [Signal transduction mechanisms];
                     COG2204"
                     /db_xref="CDD:441806"
     Site            order(135,138..139,142..143,145,169,172..173,176..177,
                     179..180,203,206..207)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          135..162
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <148..>208
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          167..197
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mekkkiliid dernirmtlt yclesegyqv dtaingeegl dillnqkkiy dlilldikmp
       61 gktgmevlke lrenenksni immtaygtik eavtaiklna idfiskpftp dqikalvakv
      121 fsrenlqedk lntfeeyief aklniiekkf dkaiealria iskepglpdt hnllgvieey
      181 kgnvddaqky yraalaldps yepansnldr itelesiind iklg
//
LOCUS       WP_235242832             177 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4241 domain-containing protein [Fusobacterium mortiferum].
ACCESSION   WP_235242832
VERSION     WP_235242832.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025391.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14025.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..177
                     /product="DUF4241 domain-containing protein"
                     /calculated_mol_wt=20947
     Region          12..158
                     /region_name="DUF4241"
                     /note="Protein of unknown function (DUF4241); pfam14025"
                     /db_xref="CDD:433653"
ORIGIN      
        1 mefitklkle dkvvvtdpcy cyepqrgivl lniqageykc cviynkenrv keaiilhesl
       61 siyeqegylw lqdgfiyvda aiagvinysl heemrrcknr sekkwedkyy keicelfdqd
      121 tdtisfrens fitstgwgdg rygvyvtknn dkilgikiiy dedeeefedd wedeeey
//
LOCUS       WP_235242588             202 aa            linear   BCT 02-MAR-2025
DEFINITION  pimeloyl-ACP methyl esterase BioG family protein [Fusobacterium
            mortiferum].
ACCESSION   WP_235242588
VERSION     WP_235242588.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 202)
  AUTHORS   Shi,J., Cao,X., Chen,Y., Cronan,J.E. and Guo,Z.
  TITLE     An Atypical alpha/beta-Hydrolase Fold Revealed in the Crystal
            Structure of Pimeloyl-Acyl Carrier Protein Methyl Esterase BioG
            from Haemophilus influenzae
  JOURNAL   Biochemistry 55 (48), 6705-6717 (2016)
   PUBMED   27933801
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016209.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04301.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..202
                     /product="pimeloyl-ACP methyl esterase BioG family
                     protein"
                     /calculated_mol_wt=23613
     Region          2..202
                     /region_name="DUF452"
                     /note="Protein of unknown function (DUF452); cl01062"
                     /db_xref="CDD:470052"
ORIGIN      
        1 mrlilffngw gmdssvvekv elpkdteikv infpykldnl eeyftkcedv flvgwsfgsy
       61 yltkwvlvnr giknfskvkk ivaingngei igkfgitpki feftlstltp eslikfyknm
      121 eiseefqnpk kefkeileel eyfkngytal enifteiiig irdkivpasr qkkyceesgi
      181 kyreldmghy pfefikawse vi
//
LOCUS       WP_235242922             123 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5713 family protein, partial [Fusobacterium mortiferum].
ACCESSION   WP_235242922
VERSION     WP_235242922.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040156.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18977.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         <1..123
                     /product="DUF5713 family protein"
     Region          26..123
                     /region_name="DUF5713"
                     /note="Family of unknown function (DUF5713); pfam18977"
                     /db_xref="CDD:436881"
ORIGIN      
        1 nksnyfprrs shfknykvil sgrgsqdmyn ddyypkflvd kvkdcivevv eflekeeyed
       61 leevqeklde mtekindlqd efdendseie tvardsigvt vekileyfgi didieeaire
      121 rdw
//
LOCUS       WP_235242700             242 aa            linear   BCT 02-MAR-2025
DEFINITION  lipopolysaccharide core heptose(II) kinase RfaY [Fusobacterium
            mortiferum].
ACCESSION   WP_235242700
VERSION     WP_235242700.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 242)
  AUTHORS   Yethon,J.A., Heinrichs,D.E., Monteiro,M.A., Perry,M.B. and
            Whitfield,C.
  TITLE     Involvement of waaY, waaQ, and waaP in the modification of
            Escherichia coli lipopolysaccharide and their role in the formation
            of a stable outer membrane
  JOURNAL   J Biol Chem 273 (41), 26310-26316 (1998)
   PUBMED   9756860
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017940.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06176.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..242
                     /product="lipopolysaccharide core heptose(II) kinase RfaY"
                     /calculated_mol_wt=29447
     Region          4..>181
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 mkklieekyg eynlysfekk yieickkile kdyitvkelk ntprnyvsii evdgekyvyk
       61 eprneykliq rkimtifkkg ealntlvnvs kamdlgiesl akiycvvnrr ekrminfsfl
      121 lmeyieenkn ievwdrnkln lgieklekih elgyyhgdfn psniiltkng eikiidtqlk
      181 kdiffnyrrh ydmitmqyds ykemkypykk nviyriaymi krfkklslik kikkirrkkr
      241 ee
//
LOCUS       WP_235242977             208 aa            linear   BCT 02-MAR-2025
DEFINITION  outer membrane beta-barrel protein [Fusobacterium mortiferum].
ACCESSION   WP_235242977
VERSION     WP_235242977.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024895.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13505.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..208
                     /product="outer membrane beta-barrel protein"
                     /calculated_mol_wt=23132
     Region          4..206
                     /region_name="OMP_b-brl"
                     /note="Outer membrane protein beta-barrel domain;
                     pfam13505"
                     /db_xref="CDD:463903"
ORIGIN      
        1 mkkvllglav vssmamvgeg tnlylktgld isgkfdkvni lgenankses drlgfdltae
       61 vtrefypnle lglglsyqdh grpeyirngn dkvqntgyks lpiygvakyn iplesnikpy
      121 lkadlgyayn fgekdaietw dgpiaktsvd nglyyglgag ieynnflfev mhkvnkadin
      181 ysfndgeklk ksydysrttl sighkfnf
//
LOCUS       WP_235242938             414 aa            linear   BCT 02-MAR-2025
DEFINITION  PTS transporter subunit EIIC [Fusobacterium mortiferum].
ACCESSION   WP_235242938
VERSION     WP_235242938.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 414)
  AUTHORS   Reizer,J., Paulsen,I.T., Reizer,A., Titgemeyer,F. and Saier,M.H.
            Jr.
  TITLE     Novel phosphotransferase system genes revealed by bacterial genome
            analysis: the complete complement of pts genes in mycoplasma
            genitalium
  JOURNAL   Microb Comp Genomics 1 (3), 151-164 (1996)
   PUBMED   9689210
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02378.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..414
                     /product="PTS transporter subunit EIIC"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /calculated_mol_wt=44245
     Region          1..406
                     /region_name="PTS-IIBC-alpha"
                     /note="PTS system, alpha-glucoside-specific IIBC
                     component; TIGR02005"
                     /db_xref="CDD:273925"
ORIGIN      
        1 mllafgvllt nkaiplanie kifefgtilk nsvlsifinl spvfcvgiaa gmakskkgna
       61 alnaivlffi fiysmnsfmk lnsllidgnl sgtgqgnilg vqildmgvfl giilgvltai
      121 ihnkyfgief ngamrlygga nlalligipi viilsiilty swpliqtgis kmtnlivstg
      181 sfgvglygfl eriliptglh hllwvpvels svsgsgvvdg vylegvrnia maelassnvd
      241 rlgpgavylt kamskmfelv gaayaiykca deenktkvka llipavgaav tagvteplef
      301 sflftapilf vvhailagig maivaildir viavsggief lammlpvgak gdtikfiivg
      361 ivqiviyyyi frflitklnl ktpgrgnatk lytkgeynea hekgkdidle kkln
//
LOCUS       WP_235242978             276 aa            linear   BCT 02-MAR-2025
DEFINITION  nitrilase-related carbon-nitrogen hydrolase [Fusobacterium
            mortiferum].
ACCESSION   WP_235242978
VERSION     WP_235242978.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 276)
  AUTHORS   Pace,H.C. and Brenner,C.
  TITLE     The nitrilase superfamily: classification, structure and function
  JOURNAL   Genome Biol 2 (1), REVIEWS0001 (2001)
   PUBMED   11380987
REFERENCE   2  (residues 1 to 276)
  AUTHORS   Bork,P. and Koonin,E.V.
  TITLE     A new family of carbon-nitrogen hydrolases
  JOURNAL   Protein Sci 3 (8), 1344-1346 (1994)
   PUBMED   7987228
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012993.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00795.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..276
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /GO_process="GO:0008152 - metabolic process [Evidence
                     IEA]"
                     /calculated_mol_wt=31228
     Region          2..267
                     /region_name="nitrilase_8"
                     /note="Uncharacterized subgroup of the nitrilase
                     superfamily (putative class 13 nitrilases); cd07586"
                     /db_xref="CDD:143610"
     Site            order(41,105,109,116,141..142,144..145,166)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:143610"
     Site            order(41,105,141)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:143610"
     Site            order(106..109,115,122..124,142,144..148,151..152,
                     184..185,187..189,191..192,213..214,257..261)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:143610"
ORIGIN      
        1 mkvyigqikp tlgnveknln imlevidkai aekndivvfp elsltgysle divfdvaike
       61 vpsvlleksk eigiifgave lgeeeypynt ayyledgkvv hkhrkvylpt ygayqegrnf
      121 magdkvrafd tkfgrlgili cedvwhqstq yilaqdgaky vfilfnspav vgkrkeelse
      181 gwktiiktns llngvysvav nrvgvedgta ffgnsfvvap ngeivaegey lkedsftcel
      241 reeeirrarf kapmfktenl nltkkeieri enkrfq
//
LOCUS       WP_235243015             277 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Fusobacterium mortiferum].
ACCESSION   WP_235243015
VERSION     WP_235243015.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..277
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=32437
     Region          10..112
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(11..13,27,45..47)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:206648"
     Region          132..266
                     /region_name="SOUL"
                     /note="SOUL heme-binding protein; cl46436"
                     /db_xref="CDD:480776"
ORIGIN      
        1 mkgaemkdyl tigevskits lpistlryyd segiispnyk dektnyryyr ffqipiikmi
       61 vhlkklgfsn akikshlenv syshtlelmn kmieqtqsei arlqnlekel kenavqmkyl
      121 itlennmdkf fieeeeirgv yaeiddsegy dgiskafkei dnfliatnqt lvpvgmfaft
      181 ikkdeiekkt ynynrlillk nyedyekrch ypkqkyacmi cqskfddigq svekvvewmk
      241 kegreigedt ivhilsgpaf ekdpsdvmyi lrvpikr
//
LOCUS       WP_235243027             281 aa            linear   BCT 02-MAR-2025
DEFINITION  cytidylyltransferase domain-containing protein [Fusobacterium
            mortiferum].
ACCESSION   WP_235243027
VERSION     WP_235243027.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 281)
  AUTHORS   Bravo,I.G., Barrallo,S., Ferrero,M.A., Rodriguez-Aparicio,L.B.,
            Martinez-Blanco,H. and Reglero,A.
  TITLE     Kinetic properties of the acylneuraminate cytidylyltransferase from
            Pasteurella haemolytica A2
  JOURNAL   Biochem J 358 (Pt 3), 585-598 (2001)
   PUBMED   11577688
REFERENCE   2  (residues 1 to 281)
  AUTHORS   Munster,A.K., Eckhardt,M., Potvin,B., Muhlenhoff,M., Stanley,P. and
            Gerardy-Schahn,R.
  TITLE     Mammalian cytidine 5'-monophosphate N-acetylneuraminic acid
            synthetase: a nuclear protein with evolutionarily conserved
            structural motifs
  JOURNAL   Proc Natl Acad Sci U S A 95 (16), 9140-9145 (1998)
   PUBMED   9689047
REFERENCE   3  (residues 1 to 281)
  AUTHORS   Tullius,M.V., Munson,R.S. Jr., Wang,J. and Gibson,B.W.
  TITLE     Purification, cloning, and expression of a cytidine
            5'-monophosphate N-acetylneuraminic acid synthetase from
            Haemophilus ducreyi
  JOURNAL   J Biol Chem 271 (26), 15373-15380 (1996)
   PUBMED   8663048
REFERENCE   4  (residues 1 to 281)
  AUTHORS   Strohmaier,H., Remler,P., Renner,W. and Hogenauer,G.
  TITLE     Expression of genes kdsA and kdsB involved in
            3-deoxy-D-manno-octulosonic acid metabolism and biosynthesis of
            enterobacterial lipopolysaccharide is growth phase regulated
            primarily at the transcriptional level in Escherichia coli K-12
  JOURNAL   J Bacteriol 177 (15), 4488-4500 (1995)
   PUBMED   7543480
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014409.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02348.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..281
                     /product="cytidylyltransferase domain-containing protein"
                     /calculated_mol_wt=32833
     Region          1..246
                     /region_name="SpsF"
                     /note="Spore coat polysaccharide biosynthesis protein
                     SpsF, cytidylyltransferase family [Cell
                     wall/membrane/envelope biogenesis]; COG1861"
                     /db_xref="CDD:441466"
ORIGIN      
        1 mnivciiqar ttssrlpnkv llslpygskk tvleqvinrv mesklinkvv vattinetdn
       61 pienlckdlk iiysrgseen vlsryyqaak ensadmvvri tsdcpcidae videliekhl
      121 kekndytsns lirsyphgld ceifsfklle eafnnatekf ekehvtpyiy ktnkdkfkig
      181 yltlrdskey ekiritldtk edytllcsvy dylykenksf kcndiiklfe ekpwlynins
      241 nieqkktcsn leeeieealr llnkqdlnra ekylkeeyyg k
//
LOCUS       WP_235243079             273 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235243079
VERSION     WP_235243079.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 273)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 273)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..273
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=30565
     Region          87..273
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 melicirptk nfssllfssl lfssaaqaag edhgrgpyvq adlayaaeri thdypkptga
       61 kkdkkistvs dyfrnirths vhprvsvgyd fggwriaady aryrkwnnnk ysvdikelrr
      121 ndktssgekn hlniktqkte hqengtfhav sslglstiyd fdtgsrfkpy igmrvayghv
      181 rhqvrsvqqe tvavttypgs gkpsvlantp ipqpayhesr sisslgfgav agvgiditpn
      241 ltldagyryh nwgrlentrf ktheaslgmr yrf
//
LOCUS       WP_235243105             234 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235243105
VERSION     WP_235243105.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 234)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 234)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..234
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=26285
     Region          48..234
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaye hithdypept gakkgkistv sdyfrnirth svhprvsvgy dfggwriaad
       61 yaryrkwnnn kysvdikelg rndktssskk nhlniktqkt ehqengtfha vsslglstiy
      121 dfdtgsrfkp yigmrvaygh vrhqvrsvqq etvavttypg sgkpsvlant pipqpayhes
      181 rsisslgfga vagvgiditp nltldagyry hnwgrlentr fktheaslgv ryrf
//
LOCUS       WP_235243109             251 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Fusobacterium mortiferum].
ACCESSION   WP_235243109
VERSION     WP_235243109.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 251)
  AUTHORS   Yeo,C.C. and Poh,C.L.
  TITLE     Characterization of IS1474, an insertion sequence of the IS21
            family isolated from Pseudomonas alcaligenes NCIB 9867
  JOURNAL   FEMS Microbiol Lett 149 (2), 257-263 (1997)
   PUBMED   9141667
REFERENCE   2  (residues 1 to 251)
  AUTHORS   Solinas,F., Marconi,A.M., Ruzzi,M. and Zennaro,E.
  TITLE     Characterization and sequence of a novel insertion sequence,
            IS1162, from Pseudomonas fluorescens
  JOURNAL   Gene 155 (1), 77-82 (1995)
   PUBMED   7698671
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01695.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..>251
                     /product="ATP-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          7..251
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 mkcqycgkey vkneaegley lpefirqhie yipacdclek krleemeeek rrqeaesirn
       61 rvkryrdisv mdsrflksnf egadmsgeym klalryaksf mkkrmdigii fyggvgtgkt
      121 fasgcianyl msrgksvlvi nlglyllkit kewgeaesel lkvvescdll iiddfgmeks
      181 ledknsawrg ekiynlidsr yrcekpliit tnlefskdes rceiakkfsm ggknrirdri
      241 vemcypvevk g
//
LOCUS       WP_235243116             146 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Fusobacterium mortiferum].
ACCESSION   WP_235243116
VERSION     WP_235243116.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02371.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         <1..146
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <6..136
                     /region_name="COG3547"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442768"
ORIGIN      
        1 lcekipmike iaeikgigia taisfvaevg dirrfksakq vqkyaglalk enssgkhkgl
       61 triskrgrkk lrtilfrati plidfnkefs siynyyierk dnplkkkqal taicckmiri
      121 fftilskgik ydetkmlhdi krpvaa
//
LOCUS       WP_235243120              84 aa            linear   BCT 02-MAR-2025
DEFINITION  efflux RND transporter permease subunit, partial [Fusobacterium
            mortiferum].
ACCESSION   WP_235243120
VERSION     WP_235243120.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 84)
  AUTHORS   Murakami,S., Nakashima,R., Yamashita,E. and Yamaguchi,A.
  TITLE     Crystal structure of bacterial multidrug efflux transporter AcrB
  JOURNAL   Nature 419 (6907), 587-593 (2002)
   PUBMED   12374972
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00873.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         <1..84
                     /product="efflux RND transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <2..70
                     /region_name="AcrB"
                     /note="Multidrug efflux pump subunit AcrB [Defense
                     mechanisms]; COG0841"
                     /db_xref="CDD:440603"
ORIGIN      
        1 scrtrlrpil mttmttvlgm lplslgigeg seiyrgmait vmfglsfsti ltlviipilf
       61 tlvedfiekl gkvlkklfnr kyae
//
LOCUS       WP_235243148             393 aa            linear   BCT 02-MAR-2025
DEFINITION  LD-carboxypeptidase [Neisseria gonorrhoeae].
ACCESSION   WP_235243148
VERSION     WP_235243148.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 393)
  AUTHORS   Korza,H.J. and Bochtler,M.
  TITLE     Pseudomonas aeruginosa LD-carboxypeptidase, a serine peptidase with
            a Ser-His-Glu triad and a nucleophilic elbow
  JOURNAL   J Biol Chem 280 (49), 40802-40812 (2005)
   PUBMED   16162494
REFERENCE   2  (residues 1 to 393)
  AUTHORS   Templin,M.F., Ursinus,A. and Holtje,J.V.
  TITLE     A defect in cell wall recycling triggers autolysis during the
            stationary growth phase of Escherichia coli
  JOURNAL   EMBO J 18 (15), 4108-4117 (1999)
   PUBMED   10428950
REFERENCE   3  (residues 1 to 393)
  AUTHORS   Gonzalez-Pastor,J.E., San Millan,J.L., Castilla,M.A. and Moreno,F.
  TITLE     Structure and organization of plasmid genes required to produce the
            translation inhibitor microcin C7
  JOURNAL   J Bacteriol 177 (24), 7131-7140 (1995)
   PUBMED   8522520
REFERENCE   4  (residues 1 to 393)
  AUTHORS   Guijarro,J.I., Gonzalez-Pastor,J.E., Baleux,F., San Millan,J.L.,
            Castilla,M.A., Rico,M., Moreno,F. and Delepierre,M.
  TITLE     Chemical structure and translation inhibition studies of the
            antibiotic microcin C7
  JOURNAL   J Biol Chem 270 (40), 23520-23532 (1995)
   PUBMED   7559516
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014114.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02016.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..393
                     /product="LD-carboxypeptidase"
                     /calculated_mol_wt=42072
     Region          61..366
                     /region_name="Peptidase_S66"
                     /note="LD-Carboxypeptidase, a serine protease, includes
                     microcin C7 self immunity protein; cl00700"
                     /db_xref="CDD:469883"
     Site            order(139..140,241..242,244..245,267..268,270..271,
                     274..275,314..315)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:132882"
     Site            order(165,260,331)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:132882"
ORIGIN      
        1 mteptsrrrf lktctaagag llqacgtsat svpplpsshs vvkartvplq tprrqssggn
       61 llrvvassgf aedtnrvnta ltrlynagft vtnqqagsrr fqrfagtdaq raadfqevas
      121 grvatpkvlm glrggygaar ilphidfasl garmrehgtl ffgfsdvcav qlallakgnm
      181 msfagpmays dfgkpapgaf tmdafikgat qnrltvdvpy iqradveteg tlwggnlsvl
      241 aslagtpymp didggilfle dvgeqpyrie rmlntlylsg ilgkqraivf gdfrmekird
      301 lydssydfsa vakhisrtak ipvltgfpfg hiadkitfpl gahtrirmng nggysvafeg
      361 yptldasalt ldtllpppdl pifpesgvad ise
//
LOCUS       WP_235243175             693 aa            linear   BCT 02-MAR-2025
DEFINITION  carbon starvation CstA family protein [Neisseria gonorrhoeae].
ACCESSION   WP_235243175
VERSION     WP_235243175.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 693)
  AUTHORS   Hwang,S., Choe,D., Yoo,M., Cho,S., Kim,S.C., Cho,S. and Cho,B.K.
  TITLE     Peptide Transporter CstA Imports Pyruvate in Escherichia coli K-12
  JOURNAL   J Bacteriol 200 (7), e00771-17 (2018)
   PUBMED   29358499
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 693)
  AUTHORS   Dubey,A.K., Baker,C.S., Suzuki,K., Jones,A.D., Pandit,P., Romeo,T.
            and Babitzke,P.
  TITLE     CsrA regulates translation of the Escherichia coli carbon
            starvation gene, cstA, by blocking ribosome access to the cstA
            transcript
  JOURNAL   J Bacteriol 185 (15), 4450-4460 (2003)
   PUBMED   12867454
REFERENCE   3  (residues 1 to 693)
  AUTHORS   Schultz,J.E. and Matin,A.
  TITLE     Molecular and functional characterization of a carbon starvation
            gene of Escherichia coli
  JOURNAL   J Mol Biol 218 (1), 129-140 (1991)
   PUBMED   1848300
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014598.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02554.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..693
                     /product="carbon starvation CstA family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009267 - cellular response to starvation
                     [Evidence IEA]"
                     /calculated_mol_wt=74305
     Region          1..678
                     /region_name="PRK15015"
                     /note="carbon starvation protein CstA"
                     /db_xref="CDD:184976"
ORIGIN      
        1 mkslktfliw givvlvglas fttlalsrge qvsavwmvta aisvyciayr fyslyianrv
       61 mrldpnrftp aerhndgldy vpthkgvlfg hhfaaiagag plvgpvlaaq mgylpgtlwi
      121 ifgvvfagav qdmtvlfvsm rrdgkslgdi vkqelgtvpg viasigilmi mviimavlal
      181 ivvkalvhsp wgtftiaatm pialfmgiyt rhirpgkige isivgfillm laviygedva
      241 kssighwfdl dgiqltwaim iygfvasvlp vwllltprdy lstflkigti aalalgiviv
      301 npalqmpavt hfidgsgpvf sgalfpflfi tiacgavsgf halissgttp kmlenethvr
      361 migyggmlme sfvaimalaa aasldpgvyf amnspaalig tdantaaevi ttklnfpvda
      421 atllhtakev gentilsrtg gaptlavgma himsrlipge ammafwyhfa llfealfilt
      481 avdagtrvar fmiqdlggif ykpfgntdsi panliatffa valwgyflyt gvtdplggin
      541 slwplfgian qmlagvalim cavvlikmkr dryvwvalvp avgvllvtcy aglqklfhnd
      601 prasflahag kysdalakne vlapakdige maqiifndki nagltilfls vvvtvaaygl
      661 rtalkarkvg wptakeipav yrdgkqpeeq sea
//
LOCUS       WP_235243199             229 aa            linear   BCT 02-MAR-2025
DEFINITION  opacity family porin [Neisseria gonorrhoeae].
ACCESSION   WP_235243199
VERSION     WP_235243199.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Dehio,C., Gray-Owen,S.D. and Meyer,T.F.
  TITLE     The role of neisserial Opa proteins in interactions with host cells
  JOURNAL   Trends Microbiol 6 (12), 489-495 (1998)
   PUBMED   10036728
REFERENCE   2  (residues 1 to 229)
  AUTHORS   Stern,A., Brown,M., Nickel,P. and Meyer,T.F.
  TITLE     Opacity genes in Neisseria gonorrhoeae: control of phase and
            antigenic variation
  JOURNAL   Cell 47 (1), 61-71 (1986)
   PUBMED   3093085
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02462.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..229
                     /product="opacity family porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=25656
     Region          48..229
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mqadlayaae rithdypeqt apkkaqlstv sdyfrnirth sihprvsvgy dfggwriaad
       61 yaryrkwnns kysvsikell rnssngnwqe lktenqengs fhavsslgls avydfklndk
      121 fkpyigarva yghvkhqvhs veskttttfl kpgqgatqpg vikdgpnskp ahhesnsirr
      181 vglgviagvg fgitpnltld agyryhnwgr lentrfkthe aslgvryrf
//
LOCUS       WP_235243240              74 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Neisseria gonorrhoeae].
ACCESSION   WP_235243240
VERSION     WP_235243240.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 74)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..>74
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          5..>74
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            10..17
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            55
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            59..61
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
ORIGIN      
        1 mkiinigvla hvdagkttlt esllynsgai telgsvdkgt trtdntller qrgitiqtgi
       61 tsfqwentkv niid
//
LOCUS       WP_235243241              91 aa            linear   BCT 02-MAR-2025
DEFINITION  CoA-binding protein, partial [Escherichia coli].
ACCESSION   WP_235243241
VERSION     WP_235243241.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024773.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13380.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>91
                     /product="CoA-binding protein"
     Region          1..>91
                     /region_name="PatZN"
                     /note="Acyl-CoA synthetase (NDP forming) [Energy
                     production and conversion]; COG1042"
                     /db_xref="CDD:440664"
ORIGIN      
        1 msqrgleall rpksiaviga smkpnragyl mmrnllaggf ngpvlpvtpa wkavlgvlaw
       61 pdiaslpftp dlavlctnas rnlalleelg e
//
LOCUS       WP_235243243            1093 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5107 domain-containing protein [Escherichia coli].
ACCESSION   WP_235243243
VERSION     WP_235243243.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028438.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17128.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..1093
                     /product="DUF5107 domain-containing protein"
                     /calculated_mol_wt=123679
     Region          40..343
                     /region_name="DUF5107"
                     /note="Domain of unknown function (DUF5107); pfam17128"
                     /db_xref="CDD:407262"
     Region          482..842
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          495..523
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(496,499..500,503..504,506,536,539..540,543..544,
                     546..547,570,573..574,577..578,581)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          534..564
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          569..597
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          603..631
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          746..772
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          749..>961
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          777..808
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mtpvkvwqer veiptyetgp qdihpmflen rvyqgssgav ypygvtdtls eqktlkswqa
       61 vwlendyikv milpelggrv hrawdkvkqr dfvyhnevik palvgllgpw isggiefnwp
      121 qhhrpttfmp vdftleahed gaqtvwvget epmhglqvmt gftlrpdraa leiasrvyng
      181 natprhflww anpavkggeg hqsvfppdvt avfdhgkrav safpiatgty ykvdysagvd
      241 isryknvpvp tsymaeksqy dfvgawchde dggllhvanh hiapgkkqws wghsefgqaw
      301 dksltdnngp yielmtgifa dnqpdftwld ayeekrfeqy flpyhslgmv qnasrdavik
      361 lqrsergiew glyaisplng yrlaireigk cnallddava lmpataiqgv lhginperlt
      421 ielsdadgni vlsyqehqpq elplpdvaka plaaqditst deawfigqhl eqyhhasrsp
      481 fdyylrgval dpldyrcnla lamleynrad fpqavayatq alkrahalnk npqcgqasli
      541 rasayerqgq yqqaeedfwr avwsgnskag gyyglarlaa rngnfdagld fcqqslracp
      601 tnqevlclhn lllvlsgrqd narvqrekll rdyplnatlw clnwfdgrse salaqwrglc
      661 qgrdvnalmt agqlinwgmp tlaaemlnvl dcqrtlplyl qasllpkaer gelvakaidv
      721 fpqfvrfpnt leevaalesi eecwfarhll acfyynkrsy nkaiafwqrc vemspefadg
      781 wrglaihawn kqhddelaar yldnayqlap qdarllferd lldklsgatp ekrlarlenn
      841 leialkrddm taellnlwhl tgqadkaadi latrkfhpwe ggegkvtsqf ilnqllrawq
      901 hldarepqqa sellhaalhy penlsegrlp gqtdndiwfw qaicanaqgd eteamrclrl
      961 aatgdrtini hsyyndqpvd ylfwqgmalr llgeqqtaqq lfsemkqwaq emaktsiead
     1021 ffavsqpdll slygdlqqqh kekclmvaml asaglgevaq yesaraelta inpawpkaal
     1081 fttvmpfifn yvh
//
LOCUS       WP_235243287             140 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF977 family protein [Escherichia coli].
ACCESSION   WP_235243287
VERSION     WP_235243287.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017929.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06163.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..140
                     /product="DUF977 family protein"
                     /calculated_mol_wt=16030
     Region          1..136
                     /region_name="DUF977"
                     /note="Bacterial protein of unknown function (DUF977);
                     pfam06163"
                     /db_xref="CDD:310626"
ORIGIN      
        1 makvstqeer ekikgqvvel vrqsgretlr qleaktgatr ylmsvlarel vasgdvynsg
       61 yglfpseqar kdwqnahkkl srakvkktav vdpdlirslp dgeirryarr qniicrecrk
      121 sevmqrvlaf yrgnfqevml
//
LOCUS       WP_235243291              67 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1482 family protein [Escherichia coli].
ACCESSION   WP_235243291
VERSION     WP_235243291.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07358.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..67
                     /product="DUF1482 family protein"
                     /calculated_mol_wt=7069
     Region          6..61
                     /region_name="DUF1482"
                     /note="Protein of unknown function (DUF1482); pfam07358"
                     /db_xref="CDD:369331"
ORIGIN      
        1 mntaialtlt vflntgepvd mvidiygsmk ecmaaaaeqk ipgncypvdk virmdnneip
       61 aglktap
//
LOCUS       WP_235243344             262 aa            linear   BCT 02-MAR-2025
DEFINITION  replication endonuclease, partial [Escherichia coli].
ACCESSION   WP_235243344
VERSION     WP_235243344.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 262)
  AUTHORS   Esposito,D. and Scocca,J.J.
  TITLE     Identification of an HP1 phage protein required for site-specific
            excision
  JOURNAL   Mol Microbiol 13 (4), 685-695 (1994)
   PUBMED   7997180
REFERENCE   2  (residues 1 to 262)
  AUTHORS   Liu,Y., Saha,S. and Haggard-Ljungquist,E.
  TITLE     Studies of bacteriophage P2 DNA replication. The DNA sequence of
            the cis-acting gene A and ori region and construction of a P2
            mini-chromosome
  JOURNAL   J Mol Biol 231 (2), 361-374 (1993)
   PUBMED   8510152
REFERENCE   3  (residues 1 to 262)
  AUTHORS   Hsu,M.Y., Inouye,M. and Inouye,S.
  TITLE     Retron for the 67-base multicopy single-stranded DNA from
            Escherichia coli: a potential transposable element encoding both
            reverse transcriptase and Dam methylase functions
  JOURNAL   Proc Natl Acad Sci U S A 87 (23), 9454-9458 (1990)
   PUBMED   1701261
REFERENCE   4  (residues 1 to 262)
  AUTHORS   van Mansfeld,A.D., van Teeffelen,H.A., Baas,P.D. and Jansz,H.S.
  TITLE     Two juxtaposed tyrosyl-OH groups participate in phi X174 gene A
            protein catalysed cleavage and ligation of DNA
  JOURNAL   Nucleic Acids Res 14 (10), 4229-4238 (1986)
   PUBMED   2940511
REFERENCE   5  (residues 1 to 262)
  AUTHORS   Ikeda,J.E., Yudelevich,A., Shimamoto,N. and Hurwitz,J.
  TITLE     Role of polymeric forms of the bacteriophage phi X174 coded gene A
            protein in phi XRFI DNA cleavage
  JOURNAL   J Biol Chem 254 (19), 9416-9428 (1979)
   PUBMED   158588
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017640.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05840.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>262
                     /product="replication endonuclease"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
     Region          179..>262
                     /region_name="Phage_GPA"
                     /note="Bacteriophage replication gene A protein (GPA);
                     cl15276"
                     /db_xref="CDD:353932"
ORIGIN      
        1 mtteyirdwq qprhavgreg teipapesal sswldayrae nerrqemada afsatplgnl
       61 inksldaqek qdktitlare arkqargavd eamaslrllp sylrdplihh lsflrkkqea
      121 drrkgkkswq aeryargtlr kiferldrtd srwltqgyrs lagrerlddl lylpqlnkhq
      181 iqtlatmtaa mfsstfetlc dgfgatdgel tmevalkayq mlarmalhlh vtpphydtlt
      241 tdkdrrnepd tellpgailr lt
//
LOCUS       WP_235243350             281 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2490 domain-containing protein [Fusobacterium perfoetens].
ACCESSION   WP_235243350
VERSION     WP_235243350.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022142.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10677.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..281
                     /product="DUF2490 domain-containing protein"
                     /calculated_mol_wt=32061
ORIGIN      
        1 mkklalllta lgvvsaaaya apeltvtsvg qeleieheng tdgttawlfn svglkyddws
       61 ftatgakqwk ysdknddvts snhrlqfdva kpvtdnltlk gryrgqnnld rfqasydyky
      121 gmflssgdff ydsvngtdhd sfhaewhpig vslgpvqvky yfeyvktlgd vqvgeveeaf
      181 dhqirlyapl ykgerltlst egrfsfhasn eyngeanatq kvyddfgnnr vylkanyvmt
      241 enlnvyanyy yqfrdyefet vkkdnvksyt snlvlgwsyk f
//
LOCUS       WP_235243406             111 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_235243406
VERSION     WP_235243406.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 111)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 111)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 111)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 111)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>111
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          1..>111
                     /region_name="PRK09984"
                     /note="phosphonate ABC transporter ATP-binding protein"
                     /db_xref="CDD:182182"
ORIGIN      
        1 mqtiirvekl aktfnqhqal havdlnihhg emvallgpsg sgkstllrhl sglitgdksv
       61 gshiellgrt vqregrlard irksrahtgy ifqqfnlvnr lsvlenvlig a
//
LOCUS       WP_235243456             268 aa            linear   BCT 02-MAR-2025
DEFINITION  replication endonuclease, partial [Escherichia coli].
ACCESSION   WP_235243456
VERSION     WP_235243456.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 268)
  AUTHORS   Esposito,D. and Scocca,J.J.
  TITLE     Identification of an HP1 phage protein required for site-specific
            excision
  JOURNAL   Mol Microbiol 13 (4), 685-695 (1994)
   PUBMED   7997180
REFERENCE   2  (residues 1 to 268)
  AUTHORS   Liu,Y., Saha,S. and Haggard-Ljungquist,E.
  TITLE     Studies of bacteriophage P2 DNA replication. The DNA sequence of
            the cis-acting gene A and ori region and construction of a P2
            mini-chromosome
  JOURNAL   J Mol Biol 231 (2), 361-374 (1993)
   PUBMED   8510152
REFERENCE   3  (residues 1 to 268)
  AUTHORS   Hsu,M.Y., Inouye,M. and Inouye,S.
  TITLE     Retron for the 67-base multicopy single-stranded DNA from
            Escherichia coli: a potential transposable element encoding both
            reverse transcriptase and Dam methylase functions
  JOURNAL   Proc Natl Acad Sci U S A 87 (23), 9454-9458 (1990)
   PUBMED   1701261
REFERENCE   4  (residues 1 to 268)
  AUTHORS   van Mansfeld,A.D., van Teeffelen,H.A., Baas,P.D. and Jansz,H.S.
  TITLE     Two juxtaposed tyrosyl-OH groups participate in phi X174 gene A
            protein catalysed cleavage and ligation of DNA
  JOURNAL   Nucleic Acids Res 14 (10), 4229-4238 (1986)
   PUBMED   2940511
REFERENCE   5  (residues 1 to 268)
  AUTHORS   Ikeda,J.E., Yudelevich,A., Shimamoto,N. and Hurwitz,J.
  TITLE     Role of polymeric forms of the bacteriophage phi X174 coded gene A
            protein in phi XRFI DNA cleavage
  JOURNAL   J Biol Chem 254 (19), 9416-9428 (1979)
   PUBMED   158588
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017640.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05840.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>268
                     /product="replication endonuclease"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
     Region          185..>268
                     /region_name="Phage_GPA"
                     /note="Bacteriophage replication gene A protein (GPA);
                     cl15276"
                     /db_xref="CDD:353932"
ORIGIN      
        1 msefawswne prpaidparf tehrqetetd lqrairyyle adkkaleeqe akekaffaqs
       61 tvgkklmtsl eeagqrekla qsiiskrqat eqdpvarafa tlkvlpvylr eplsrhlsfl
      121 rkkqeadrqk gkkswqakry argtlrkife rldrtdhrwl tpgyrslagr erlddllylp
      181 qlnkhqiqtl atmtaamfss tfeklcdgfg atdgeltmdv tlkayqmlar malhlhampp
      241 hydalttdkd rrnepdtell pgailrlt
//
LOCUS       WP_235243488             620 aa            linear   BCT 02-MAR-2025
DEFINITION  AIDA repeat-containing protein, partial [Escherichia coli].
ACCESSION   WP_235243488
VERSION     WP_235243488.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 620)
  AUTHORS   Selkrig,J., Mosbahi,K., Webb,C.T., Belousoff,M.J., Perry,A.J.,
            Wells,T.J., Morris,F., Leyton,D.L., Totsika,M., Phan,M.D.,
            Celik,N., Kelly,M., Oates,C., Hartland,E.L., Robins-Browne,R.M.,
            Ramarathinam,S.H., Purcell,A.W., Schembri,M.A., Strugnell,R.A.,
            Henderson,I.R., Walker,D. and Lithgow,T.
  TITLE     Discovery of an archetypal protein transport system in bacterial
            outer membranes
  JOURNAL   Nat Struct Mol Biol 19 (5), 506-510,S1 (2012)
   PUBMED   22466966
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 620)
  AUTHORS   Fang,Y., Ngeleka,M., Middleton,D.M. and Simko,E.
  TITLE     Characterization and immuno-detection of AIDA-I adhesin isolated
            from porcine Escherichia coli
  JOURNAL   Vet Microbiol 109 (1-2), 65-73 (2005)
   PUBMED   15950405
REFERENCE   3  (residues 1 to 620)
  AUTHORS   Sherlock,O., Schembri,M.A., Reisner,A. and Klemm,P.
  TITLE     Novel roles for the AIDA adhesin from diarrheagenic Escherichia
            coli: cell aggregation and biofilm formation
  JOURNAL   J Bacteriol 186 (23), 8058-8065 (2004)
   PUBMED   15547278
REFERENCE   4  (residues 1 to 620)
  AUTHORS   Farthing,M.J.
  TITLE     Bugs and the gut: an unstable marriage
  JOURNAL   Best Pract Res Clin Gastroenterol 18 (2), 233-239 (2004)
   PUBMED   15123066
REFERENCE   5  (residues 1 to 620)
  AUTHORS   Benz,I. and Schmidt,M.A.
  TITLE     AIDA-I, the adhesin involved in diffuse adherence of the
            diarrhoeagenic Escherichia coli strain 2787 (O126:H27), is
            synthesized via a precursor molecule
  JOURNAL   Mol Microbiol 6 (11), 1539-1546 (1992)
   PUBMED   1625582
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027494.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16168.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>620
                     /product="AIDA repeat-containing protein"
     Region          6..53
                     /region_name="ESPR"
                     /note="Extended Signal Peptide of Type V secretion system;
                     pfam13018"
                     /db_xref="CDD:463773"
     Region          <97..>542
                     /region_name="auto_AIDA-I"
                     /note="autotransporter adhesin AIDA-I; NF033176"
                     /db_xref="CDD:380183"
     Region          517..>619
                     /region_name="PL_Passenger_AT"
                     /note="Pertactin-like passenger domains (virulence
                     factors) of autotransporter proteins of the type V
                     secretion system. Autotransporters are proteins used by
                     Gram-negative bacteria to transport proteins across their
                     outer membranes. The C-terminal (beta) domain...; cl00185"
                     /db_xref="CDD:469645"
ORIGIN      
        1 mkrhlntsyr lvwnhitgaf vvaselarsr gkragvaval slaaatslpa paadtvvqag
       61 etvsggtlin hdrqtvsgta dgvtvstgle lgpdsddntg gqqitpggta rnttvtadgl
      121 qdvmaggsat dtvisagggq nlrgqasgtv lnggeqwiha ggsasgtvin rdgyqtikhg
      181 glatgtivnt gaeggpdsen vstgqmvggt aesttinkng rqviwssgla rdtliyaggd
      241 qtvhgeahnt rleggnqyvh kdglalntvi ndggwqvvke gavaenttvn qkgrlqvnag
      301 gkatdvtqnt gsalvtstaa tvtgtnrlgv fsvvegkadn vvlenggrld vlsghtatnt
      361 hvdeggtldv rsggtattis mgdggvllad sgaavsgtrs dgtafriggg qadalmlgkg
      421 saftlnagdt atdttvnggq ltahggileg tttlnngatl tlsgktvnnd tltiregdal
      481 lqggaltgng sveksgsgtl tvsnttltqk avnlnegtlt lnnstvttdv taqrgtalkl
      541 tgstvlngai dptnvtlasg atwnipdnat vqsvvddlsh agqihftstr tgkfvpatlk
      601 vknlngqngt islrvrpdma
//
LOCUS       WP_235243547             109 aa            linear   BCT 02-MAR-2025
DEFINITION  alcohol dehydrogenase catalytic domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_235243547
VERSION     WP_235243547.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 109)
  AUTHORS   Taneja,B. and Mande,S.C.
  TITLE     Conserved structural features and sequence patterns in the GroES
            fold family
  JOURNAL   Protein Eng 12 (10), 815-818 (1999)
   PUBMED   10556240
REFERENCE   2  (residues 1 to 109)
  AUTHORS   Murzin,A.G.
  TITLE     Structural classification of proteins: new superfamilies
  JOURNAL   Curr Opin Struct Biol 6 (3), 386-394 (1996)
   PUBMED   8804825
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08240.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>109
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
     Region          35..>108
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
ORIGIN      
        1 dtnakttsed vkdgakeavk eavkseevee akemravvln gfgglkcvkt vkrpqpslad
       61 gevlirvqlc gvsfqdvmvr qgfteshpki pfilgfecag vveavaddi
//
LOCUS       WP_235243590              70 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase, partial [Escherichia
            coli].
ACCESSION   WP_235243590
VERSION     WP_235243590.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 70)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 70)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>70
                     /product="SDR family NAD(P)-dependent oxidoreductase"
     Region          35..>70
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mvvngvatgv vltlavkfvy ryqsgrctsk trlvgktaiv tgasagigkv tardlaqrga
       61 rvilacrnve
//
LOCUS       WP_235243593             160 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-binding dehydrogenase, partial [Escherichia coli].
ACCESSION   WP_235243593
VERSION     WP_235243593.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024989.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13602.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>160
                     /product="zinc-binding dehydrogenase"
     Region          <1..135
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
ORIGIN      
        1 vdvvldcqgg decnkgysll kplgryilyg pssivtgetk silsvikswr qvekvaplrl
       61 yednkaifgf nlrrllhcqs nghekvrsvv eevyklwqag vvkahidsty aledvtdamm
      121 kmherrnvgk llldlsmepk tnpttpkahp ttpkaststp
//
LOCUS       WP_235243607             119 aa            linear   BCT 02-MAR-2025
DEFINITION  30S ribosomal protein S2, partial [Escherichia coli].
ACCESSION   WP_235243607
VERSION     WP_235243607.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012538.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00318.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>119
                     /product="30S ribosomal protein S2"
                     /GO_component="GO:0005840 - ribosome [Evidence IEA]"
                     /GO_function="GO:0003735 - structural constituent of
                     ribosome [Evidence IEA]"
                     /GO_process="GO:0006412 - translation [Evidence IEA]"
     Region          3..>119
                     /region_name="PTZ00254"
                     /note="40S ribosomal protein SA; Provisional"
                     /db_xref="CDD:240331"
ORIGIN      
        1 mtrflaasth lgannanfqm eqyvfkrrqd gvhiihlrkt yekillaara iatienpadv
       61 yvissrpmgq ravlkfaryt gatpiagrft pgaftnqiqa afreprllvv tdpasdhqp
//
LOCUS       WP_235243645             135 aa            linear   BCT 02-MAR-2025
DEFINITION  D-Ala-D-Ala carboxypeptidase family metallohydrolase [Fusobacterium
            perfoetens].
ACCESSION   WP_235243645
VERSION     WP_235243645.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019896.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08291.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..135
                     /product="D-Ala-D-Ala carboxypeptidase family
                     metallohydrolase"
                     /calculated_mol_wt=15517
     Region          5..120
                     /region_name="Peptidase_M15_3"
                     /note="Peptidase M15; cl42048"
                     /db_xref="CDD:455393"
ORIGIN      
        1 mkksyftvee isrsemanks niknipnrle lhnietitip qmniireflg vpiivnsgyr
       61 ckelnrkvgg vynskhlegl avdgipkgln lrecwnklrd skyaslldqc ilyekrgfih
      121 fgftvgiprq qffek
//
LOCUS       WP_235243664             258 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma factor [Fusobacterium perfoetens].
ACCESSION   WP_235243664
VERSION     WP_235243664.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 258)
  AUTHORS   Campbell,E.A., Muzzin,O., Chlenov,M., Sun,J.L., Olson,C.A.,
            Weinman,O., Trester-Zedlitz,M.L. and Darst,S.A.
  TITLE     Structure of the bacterial RNA polymerase promoter specificity
            sigma subunit
  JOURNAL   Mol Cell 9 (3), 527-539 (2002)
   PUBMED   11931761
REFERENCE   2  (residues 1 to 258)
  AUTHORS   Malhotra,A., Severinova,E. and Darst,S.A.
  TITLE     Crystal structure of a sigma 70 subunit fragment from E. coli RNA
            polymerase
  JOURNAL   Cell 87 (1), 127-136 (1996)
   PUBMED   8858155
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04542.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..258
                     /product="sigma factor"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=30890
     Region          <52..>134
                     /region_name="PRK09210"
                     /note="RNA polymerase sigma factor RpoD; Validated"
                     /db_xref="CDD:236413"
ORIGIN      
        1 mllenfekfv fekyrdnnef deflkddlef dlelerenef lisqkpveem sdenvldyle
       61 einlyeplte eeyeeftdnl edeeakekii vdnfteiaki alyflrdgie yleliqegvm
      121 gaveainrys ydngnikkyi kiwagrqmsf yieerfeqmk qeflyyftkt hmddveitne
      181 ekeqkikkle slsiddvaft lskneikaie yyfglgldkr ysifeieqem kleknqgepl
      241 fsmalskiss rdgrmfsl
//
LOCUS       WP_235243692             228 aa            linear   BCT 02-MAR-2025
DEFINITION  ferritin-like fold-containing protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235243692
VERSION     WP_235243692.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025166.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13794.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..228
                     /product="ferritin-like fold-containing protein"
                     /calculated_mol_wt=24864
     Region          9..179
                     /region_name="Ferritin_like"
                     /note="Ferritin-like superfamily of diiron-containing
                     four-helix-bundle proteins; cl00264"
                     /db_xref="CDD:469698"
ORIGIN      
        1 mnhdqvgdpt ytqaveellg alayaelsgy lrvaadaqsa ptlslqitlg sisarawqnf
       61 dnlnahisqa gadidalmqp fvravdqfhe rtpskdwleg lvkayvgdei ardfyrevar
      121 rvdpatravv davlddrgqs qaladllrra ieenptsagr lalwgrrlvg eaiaqtqhva
      181 adhdalaall igaweqedeq adlvelgrml trlteahtar mrrvglas
//
LOCUS       WP_235243757             149 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail tube protein [Fusobacterium perfoetens].
ACCESSION   WP_235243757
VERSION     WP_235243757.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 149)
  AUTHORS   Pell,L.G., Cumby,N., Clark,T.E., Tuite,A., Battaile,K.P.,
            Edwards,A.M., Chirgadze,N.Y., Davidson,A.R. and Maxwell,K.L.
  TITLE     A conserved spiral structure for highly diverged phage tail
            assembly chaperones
  JOURNAL   J Mol Biol 425 (14), 2436-2449 (2013)
   PUBMED   23542344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020949.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09393.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..149
                     /product="phage tail tube protein"
                     /calculated_mol_wt=16163
     Region          6..131
                     /region_name="DUF2001"
                     /note="Phage tail tube protein; pfam09393"
                     /db_xref="CDD:430580"
ORIGIN      
        1 madflfrekd vvsgsfgkcy iggrhwaevs efeaklklds kdvllaggek gkkntsssie
       61 iklklqkvfs pelellksvt sgtlnpmtti niqlddpear gaealafndc mftgdidlgs
      121 fksgeltere ltlscvpsrv eilesiadv
//
LOCUS       WP_235243773             700 aa            linear   BCT 02-MAR-2025
DEFINITION  phage portal protein family protein [Fusobacterium perfoetens].
ACCESSION   WP_235243773
VERSION     WP_235243773.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06074.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..700
                     /product="phage portal protein family protein"
                     /calculated_mol_wt=81520
     Region          43..>382
                     /region_name="DUF935"
                     /note="Protein of unknown function (DUF935); cl19863"
                     /db_xref="CDD:473237"
     Region          488..680
                     /region_name="COG2369"
                     /note="Uncharacterized protein, contains phage Mu head
                     morphogenesis gpF-like domain [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:441936"
ORIGIN      
        1 mrkiatkkin keliksavik mfeetysdtd ivtsevidkl lldidissal nkieretagr
       61 ilsvvaespe ndelaqeink rfssikfnri inhlitaryy gyscfeivyn edftinslip
      121 ipykyltykd kdkkwilrig tkeielnrek fllcihrwnp anptgktifn tcqqafldke
      181 mylrqlrgla qkygdvivvy pynenldeke araigetvlk akgksaigvp vdrthslkds
      241 fefiklsdld peiytklyag ekekliqnll gstltleass regkgtnalg evhqegfeqv
      301 iqevcnfcad slyqliqlds iyygydptlf iwklekvvtq eeqaeiekkq qefmgikldn
      361 inklatagye fddkylgeyl gvdyknilkk ktiapviefs ededkklfnt fesatlfney
      421 iikridefik nihnqileqi skikegtdfs lnldlsmled dliisfikgf tnnksityge
      481 vinefnpfkm kfdeaiksfl dktpilydei eeitqqvrsn fvwlkkstdl eattrlfdnm
      541 kksleegttf kqwlkdceet inklglgeqg yylenvyrtn mmteysigny kqqmeciedy
      601 pyweycaied nrtstlcknl dgvvkrfddp fwsayyppnh yqcrssvisr skeeikkfnl
      661 kiskkeidid vksfkgnpae iywsniknna qtkqgsfkwe
//
LOCUS       WP_235243025             313 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase family 52 [Fusobacterium mortiferum].
ACCESSION   WP_235243025
VERSION     WP_235243025.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 313)
  AUTHORS   Coutinho,P.M., Deleury,E., Davies,G.J. and Henrissat,B.
  TITLE     An evolving hierarchical family classification for
            glycosyltransferases
  JOURNAL   J Mol Biol 328 (2), 307-317 (2003)
   PUBMED   12691742
REFERENCE   2  (residues 1 to 313)
  AUTHORS   Jones,P.A., Samuels,N.M., Phillips,N.J., Munson,R.S. Jr.,
            Bozue,J.A., Arseneau,J.A., Nichols,W.A., Zaleski,A., Gibson,B.W.
            and Apicella,M.A.
  TITLE     Haemophilus influenzae type b strain A2 has multiple
            sialyltransferases involved in lipooligosaccharide sialylation
  JOURNAL   J Biol Chem 277 (17), 14598-14611 (2002)
   PUBMED   11842084
REFERENCE   3  (residues 1 to 313)
  AUTHORS   Bozue,J.A., Tullius,M.V., Wang,J., Gibson,B.W. and Munson,R.S. Jr.
  TITLE     Haemophilus ducreyi produces a novel sialyltransferase.
            Identification of the sialyltransferase gene and construction of
            mutants deficient in the production of the sialic acid-containing
            glycoform of the lipooligosaccharide
  JOURNAL   J Biol Chem 274 (7), 4106-4114 (1999)
   PUBMED   9933604
REFERENCE   4  (residues 1 to 313)
  AUTHORS   Gilbert,M., Watson,D.C., Cunningham,A.M., Jennings,M.P., Young,N.M.
            and Wakarchuk,W.W.
  TITLE     Cloning of the lipooligosaccharide alpha-2,3-sialyltransferase from
            the bacterial pathogens Neisseria meningitidis and Neisseria
            gonorrhoeae
  JOURNAL   J Biol Chem 271 (45), 28271-28276 (1996)
   PUBMED   8910446
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019535.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07922.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..313
                     /product="glycosyltransferase family 52"
                     /calculated_mol_wt=37265
     Region          <122..283
                     /region_name="A-2_8-polyST"
                     /note="Alpha-2,8-polysialyltransferase (POLYST); cl40640"
                     /db_xref="CDD:454802"
ORIGIN      
        1 mkknlvvegs ayslllfflv eqnidnvifl lnraiplkic snleelydkk nvyvvekmnl
       61 ksdkslknkv knikeivkfl iyiikifkgk kyldkyyikp gifisypfiw tsknileegk
      121 nkpyyldenw knklinnkky ieniyltkts ekisnykire idllelwkrk saieknkilk
      181 ifnyeekmik elkkkktill tqpldkygie ekekmkiymk llenineeei vikshprees
      241 dykkffpnvm vidgeiviei lyllgvefen iitlfssaal nikgknlyyy gtekfeileq
      301 kfgeikgyik ink
//
LOCUS       WP_235243909             335 aa            linear   BCT 02-MAR-2025
DEFINITION  M1 family aminopeptidase [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235243909
VERSION     WP_235243909.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 335)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01433.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..335
                     /product="M1 family aminopeptidase"
                     /GO_function="GO:0008237 - metallopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=36077
     Region          2..316
                     /region_name="GluZincin"
                     /note="Gluzincin Peptidase family (thermolysin-like
                     proteinases, TLPs) which includes peptidases M1, M2, M3,
                     M4, M13, M32 and M36 (fungalysins); cl14813"
                     /db_xref="CDD:472708"
ORIGIN      
        1 mldgsevdag sladsrlpla lsagaheltv haemaysrdg qglhravdpa dgetylyghl
       61 fldaaprvfa cfdqpdlkap fqisvranpe wavisngvie atkadrvdfa vtkplatyfv
      121 tvcagpyvsv tgehrgvplg vharaslaaa lkthapdild vtrgaldyfe dlfgfdypfg
      181 sydqvfvpef nagamenpgc vtfrdgllyr gvatsedimg rsltvahela hmwcgdlvtm
      241 kwwedlwlne sfaeylghaa lahisdsaap wvhgsisrkt wgyaaeraps ahpvaasaad
      301 teaalanfdg isyakgrlsc aswwrplatr lsqla
//
LOCUS       WP_235243622             116 aa            linear   BCT 02-MAR-2025
DEFINITION  head decoration protein [Fusobacterium perfoetens].
ACCESSION   WP_235243622
VERSION     WP_235243622.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 116)
  AUTHORS   Yang,F., Forrer,P., Dauter,Z., Conway,J.F., Cheng,N.,
            Cerritelli,M.E., Steven,A.C., Pluckthun,A. and Wlodawer,A.
  TITLE     Novel fold and capsid-binding properties of the lambda-phage
            display platform protein gpD
  JOURNAL   Nat Struct Biol 7 (3), 230-237 (2000)
   PUBMED   10700283
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014921.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02924.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..116
                     /product="head decoration protein"
                     /calculated_mol_wt=12374
ORIGIN      
        1 mnlvknvaty dtkvlkisgp lgknftlksg ektiqagqll sydketgklv kyakdtklaf
       61 tialedadat sgdvpvlvav pgtvfnsaev kgadlesdfn vvkelwengi ileevk
//
LOCUS       WP_235243926             163 aa            linear   BCT 02-MAR-2025
DEFINITION  4Fe-4S binding protein [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235243926
VERSION     WP_235243926.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012267.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00037.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..163
                     /product="4Fe-4S binding protein"
                     /calculated_mol_wt=18016
     Region          1..>110
                     /region_name="PRK05888"
                     /note="NADH-quinone oxidoreductase subunit NuoI"
                     /db_xref="CDD:235637"
ORIGIN      
        1 mkglikglkt taktlvspth tqqyphvepe lpdrsrgvia lladnctscm lcarecpdwc
       61 iyidshkete eptveggrak shnvldrfdi dfslcmycgi cievcpfdal fglptlpmpk
      121 atsatcctak tasaagwprc qmtpelkpka akttwqrrpr drr
//
LOCUS       WP_235243927             256 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: YlmH/Sll1252 family protein [Fusobacterium].
ACCESSION   WP_235243927
VERSION     WP_235243927.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium
  ORGANISM  Fusobacterium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae.
REFERENCE   1  (residues 1 to 256)
  AUTHORS   Inoue-Kashino,N., Kashino,Y., Orii,H., Satoh,K., Terashima,I. and
            Pakrasi,H.B.
  TITLE     S4 protein Sll1252 is necessary for energy balancing in
            photosynthetic electron transport in Synechocystis sp. PCC 6803
  JOURNAL   Biochemistry 50 (3), 329-339 (2011)
   PUBMED   21141807
REFERENCE   2  (residues 1 to 256)
  AUTHORS   Fadda,D., Pischedda,C., Caldara,F., Whalen,M.B., Anderluzzi,D.,
            Domenici,E. and Massidda,O.
  TITLE     Characterization of divIVA and other genes located in the
            chromosomal region downstream of the dcw cluster in Streptococcus
            pneumoniae
  JOURNAL   J Bacteriol 185 (20), 6209-6214 (2003)
   PUBMED   14526035
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037631.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17774.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Fusobacterium"
                     /db_xref="taxon:848"
     Protein         1..256
                     /product="YlmH/Sll1252 family protein"
                     /calculated_mol_wt=29650
     Region          1..242
                     /region_name="YlmH_RBD"
                     /note="Putative RNA-binding domain in YlmH; cl40612"
                     /db_xref="CDD:477410"
ORIGIN      
        1 mdkkgflnlf knddeqiivk lwedielaqn idyfietdmf yppniwnile kiningmkfl
       61 mcgltensek kniiifpkdf qgempefqlt ffkidgtnrf kelehkdflg timslgikre
      121 ilgdlivken iaygvilkek feiienlekv snipvkisei skdevpqsef kellitvpsi
      181 rldsvvgeit nnsrqksvsl idegfvmvny niqkskslel kekdiitirk vgkfifeniv
      241 genkkgkiki likmfk
//
LOCUS       WP_235243955             900 aa            linear   BCT 02-MAR-2025
DEFINITION  LPS export ABC transporter periplasmic protein LptC [Fusobacterium
            perfoetens].
ACCESSION   WP_235243955
VERSION     WP_235243955.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 900)
  AUTHORS   Sperandeo,P., Lau,F.K., Carpentieri,A., De Castro,C., Molinaro,A.,
            Deho,G., Silhavy,T.J. and Polissi,A.
  TITLE     Functional analysis of the protein machinery required for transport
            of lipopolysaccharide to the outer membrane of Escherichia coli
  JOURNAL   J Bacteriol 190 (13), 4460-4469 (2008)
   PUBMED   18424520
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018537.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06835.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     gene            1..900
                     /gene="lptC"
     Protein         1..900
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /calculated_mol_wt=101864
     Region          279..>430
                     /region_name="LptD"
                     /note="LPS assembly outer membrane protein LptD (organic
                     solvent tolerance protein OstA) [Cell
                     wall/membrane/envelope biogenesis]; COG1452"
                     /db_xref="CDD:441061"
     Region          352..>623
                     /region_name="Agg_substance"
                     /note="LPXTG-anchored aggregation substance; NF033875"
                     /db_xref="CDD:411439"
     Region          396..>476
                     /region_name="LptD"
                     /note="LPS assembly outer membrane protein LptD (organic
                     solvent tolerance protein OstA) [Cell
                     wall/membrane/envelope biogenesis]; COG1452"
                     /db_xref="CDD:441061"
     Region          615..>688
                     /region_name="LptD"
                     /note="LPS assembly outer membrane protein LptD (organic
                     solvent tolerance protein OstA) [Cell
                     wall/membrane/envelope biogenesis]; COG1452"
                     /db_xref="CDD:441061"
     Region          776..894
                     /region_name="LptA"
                     /note="Lipopolysaccharide export system protein LptA [Cell
                     wall/membrane/envelope biogenesis]; COG1934"
                     /db_xref="CDD:441537"
ORIGIN      
        1 mnkkrirnsi lfvgiillgy lnyykeedgf gvipnviett nvvydtsgyh ieaekqiddm
       61 dldttkfeka takydemtls gnkvfldagk nlfleenivg dngagwkmys eamsynqykd
      121 qltsnkgmka vneaenltle gkeivtnkkf dvidiskdvi lsndrikisg dkgnykdkmk
      181 qfvlagngkf eslgaekisg efnqgkyytd kdkielrygy tgyyddaiik gksldynnan
      241 qtfisrnnpv iqidgytins reikklrpen eidivgkvsg tngdirfsgd ygvykmdeki
      301 lylngnvvia nskgekitgd lvrynfetki adlsnkgkdv vytyetrkvt tkkmvydfnk
      361 enmllndgyv fedneyrsig knmkydnisk igniqegkvf vkatgenlka neinfdttkk
      421 dytaigdvri dsknsivttd kveyftsqdk giipnnfvmk nkkdgsiing knaiytiskn
      481 qvtseeefny tnkdsylsgk gilydlttee geilsavnyk dsksgnnitg dkavfkkeny
      541 lnikenvklt tkseemttte anysfskdiv dipnkiefra ldgsfkgnlv ngklynskki
      601 fvgnklsgvs nkgenivadk leyslnekka klknnvivtn tdsklsgnev iydtkkneif
      661 avgnvkmnyq sntkltgeni llnnltkdvs gekihmvtdk neqissnkfk gnldkmmfrf
      721 ldnvngsfmt kdekgqiptt lkgedvtltf tqdkgknkvh rvagkketti tredqniksd
      781 divynflkgt vvanknnriy mndnknrtti lgekmegnln eeklylkakt tiesynekne
      841 kttlvgnsgv vdnkqetvel kenvkmennq fifsadriiy nkktqkvkaf gntkidykik
//
LOCUS       WP_235243967             152 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6286 domain-containing protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235243967
VERSION     WP_235243967.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039399.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19803.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..152
                     /product="DUF6286 domain-containing protein"
                     /calculated_mol_wt=15698
     Region          57..146
                     /region_name="DUF6286"
                     /note="Family of unknown function (DUF6286); pfam19803"
                     /db_xref="CDD:466194"
ORIGIN      
        1 mialavvavl dalidqglis gdmrlpkava afdgleptnt vvaiavvlvl vglwltiaal
       61 kpakfthtat sgnksvwisr talegsvrda aghtrgvssv gevsarkski tvsinttadt
      121 qtvakaveae vverlrglsd vkvvvrtrkd sa
//
LOCUS       WP_235243968             739 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Fusobacterium perfoetens].
ACCESSION   WP_235243968
VERSION     WP_235243968.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 739)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 739)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012234.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00004.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..739
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=85199
     Region          10..482
                     /region_name="ycf46"
                     /note="Ycf46; Provisional; CHL00195"
                     /db_xref="CDD:177094"
     Region          508..739
                     /region_name="YfmG"
                     /note="Formylglycine-generating enzyme, required for
                     sulfatase activity, contains SUMF1/FGE domain
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1262"
                     /db_xref="CDD:440874"
ORIGIN      
        1 mdnqistyvk akrpilyinh ydykeidkmi eegakevnis kifeyrsige vdfktkkvle
       61 eekvnlfkfl nknyslglfe kvflvlkdid nelenpevla mikkiaeidv ynldynltii
      121 ivsqniqvpk elenyisive ipildkdeie eyikevaner kikvnqddlg eiaislkgls
      181 kwyitqilnm mdiistsniq kiikekgqii kksgilelid fkekisdigg lenlkewlen
      241 kakifrrlde akkfgvdtpk glmlvgmpgc gksltakvas rmfnvpllrl digrllgkyv
      301 gesehnlrma lkmsesispc ilwideieka fagidqsgga sditkrlfgq fltwlqeken
      361 tvfvvatand issfppeflr kgrfdeifyv dfpnkderee ifrihlekrg kyneelidlg
      421 klasltdgfc gadieeavki svenlflsdn adkimytndi ifgikktdsm kstiekkite
      481 lqkayeifkl ksaslkegek kksdvfkdmi lvrggkykps ftnvekkvsd lyvgkylisq
      541 fnwenimknn psdylerknp veniswiesl efcnklseky glkpvykied nnlvkiiykd
      601 gkevtpkian fkqtegyrlp tevewewfar ggevaiqens fdtkyagsdn idevawyken
      661 skfkthtigt krpnelgiyd csgnlwewcy dfagevsfds krilrggawn tkdcqikmrf
      721 siqesekndi iglrivrna
//
LOCUS       WP_235244005             272 aa            linear   BCT 02-MAR-2025
DEFINITION  pseudouridine synthase [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235244005
VERSION     WP_235244005.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 272)
  AUTHORS   Wrzesinski,J., Nurse,K., Bakin,A., Lane,B.G. and Ofengand,J.
  TITLE     A dual-specificity pseudouridine synthase: an Escherichia coli
            synthase purified and cloned on the basis of its specificity for
            psi 746 in 23S RNA is also specific for psi 32 in tRNA(phe)
  JOURNAL   RNA 1 (4), 437-448 (1995)
   PUBMED   7493321
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013045.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00849.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..272
                     /product="pseudouridine synthase"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /GO_process="GO:0001522 - pseudouridine synthesis
                     [Evidence IEA]"
                     /GO_process="GO:0009451 - RNA modification [Evidence IEA]"
                     /calculated_mol_wt=30703
     Region          23..268
                     /region_name="PseudoU_synth"
                     /note="Pseudouridine synthases catalyze the isomerization
                     of specific uridines in an RNA molecule to pseudouridines
                     (5-ribosyluracil, psi); cl00130"
                     /db_xref="CDD:469624"
     Site            order(108..111,211)
                     /site_type="active"
                     /db_xref="CDD:211324"
ORIGIN      
        1 mgawlrdklt ervevtrllr eerfvyadgs pvrdrapytp htfvwfhrdl pdetpvpgqi
       61 eivhrddrlv vidkpaflss iprgqhires vvvrlrdnll lpeltplhrl dritsgllvc
      121 atqqrwrgpy qslfqnggmt ktcralapih ddlelpitva nhiskprgap saqvlpgali
      181 naethvales hlddfgvyrl tprtgrthql rmhlnglgip ivgdplypvd lelavddfsq
      241 plqllaaeis ftdpingtqr rfmstrrlpl sr
//
LOCUS       WP_235244050             168 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: NUDIX domain-containing protein [Fusobacterium].
ACCESSION   WP_235244050
VERSION     WP_235244050.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium
  ORGANISM  Fusobacterium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Fusobacterium"
                     /db_xref="taxon:848"
     Protein         1..168
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=19252
     Region          22..150
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 meefvflkpr kmkhpqngmt leylekqsai aallvsadgk kgyfveqfrp gingnsievi
       61 aglidegeid mdalyrevse eggynkedyd iiytekkpla ispgyteekl slyilklkdg
      121 akqkslhlde geelegrwld fdevleksnd fktfylvkiy ellnlknr
//
LOCUS       WP_235244056             725 aa            linear   BCT 02-MAR-2025
DEFINITION  3'-5' exonuclease [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235244056
VERSION     WP_235244056.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 725)
  AUTHORS   Ozawa,K., Horan,N.P., Robinson,A., Yagi,H., Hill,F.R., Jergic,S.,
            Xu,Z.Q., Loscha,K.V., Li,N., Tehei,M., Oakley,A.J., Otting,G.,
            Huber,T. and Dixon,N.E.
  TITLE     Proofreading exonuclease on a tether: the complex between the E.
            coli DNA polymerase III subunits alpha, epsilon, theta; and beta
            reveals a highly flexible arrangement of the proofreading domain
  JOURNAL   Nucleic Acids Res 41 (10), 5354-5367 (2013)
   PUBMED   23580545
REFERENCE   2  (residues 1 to 725)
  AUTHORS   Viswanathan,M. and Lovett,S.T.
  TITLE     Exonuclease X of Escherichia coli. A novel 3'-5' DNase and Dnaq
            superfamily member involved in DNA repair
  JOURNAL   J Biol Chem 274 (42), 30094-30100 (1999)
   PUBMED   10514496
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024754.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13361.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..725
                     /product="3'-5' exonuclease"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=78436
     Region          <249..717
                     /region_name="COG3972"
                     /note="Superfamily I DNA and RNA helicases [Replication,
                     recombination and repair]"
                     /db_xref="CDD:443172"
ORIGIN      
        1 meklqtddta pglhiepivg aqdsrvrtgr vddnfravmf kvtaegsvty vmhgfwkhdv
       61 anriaesvml tvnpltgiae iktsvdseal aavaeasaea aagsstptpt ptaastqpev
      121 tagpgllehy gldaeklikl gldeefaraa mtvsdeaalm alvercsiew qglalidlsa
      181 gkpieevksi ygldrpvdes gtedeqllrg lehpasqltf awiedneelr raieesefaa
      241 wrtflhplqa kfverdfsga skitggagtg ktvvalhrar rlakeagspr vvlttyttnl
      301 aaslqrdivr ldpdvalakr lgepglridg vdaliravla qagagiatas eavlgygttq
      361 vlqrtdnqaw deaieaagqe lpdklrsaaf faaeygavvl prrvktetay fraprrgrgv
      421 alsrgqrvav waviesyras srargtidfe eaaaiaaehl dieaetgsrl adhvlvdegq
      481 dlvatrwqfl ralvapgpnd lfiaedshqr iygqkitlsh lgiqtqgksr rltlnyrtta
      541 qnlrwamsvl dgssfsdidg dseshdtyrs arsgpvpvel acgsmtdeld qaaellkgwl
      601 adpdvasape tvavlvrdqy qrervvngle ergidvrpvd rdairagspv amtmhrakgt
      661 efarvllfgv rdgslpsgvk kydfseadlq dallrersll yvaasrardv laiswsgqks
      721 smlsd
//
LOCUS       WP_235243897             198 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235243897
VERSION     WP_235243897.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 198)
  AUTHORS   Hayashi,H., De Bellis,L., Yamaguchi,K., Kato,A., Hayashi,M. and
            Nishimura,M.
  TITLE     Molecular characterization of a glyoxysomal long chain acyl-CoA
            oxidase that is synthesized as a precursor of higher molecular mass
            in pumpkin
  JOURNAL   J Biol Chem 273 (14), 8301-8307 (1998)
   PUBMED   9525937
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013883.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01756.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..198
                     /product="acyl-CoA dehydrogenase"
                     /GO_component="GO:0005777 - peroxisome [Evidence IEA]"
                     /GO_function="GO:0003997 - acyl-CoA oxidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006635 - fatty acid beta-oxidation
                     [Evidence IEA]"
                     /calculated_mol_wt=22096
     Region          <61..163
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
ORIGIN      
        1 mtnyketfgd ldskgmvqfv arsfggavie rtaarplinr lidaasrrse edtlldrgwh
       61 lsmfedrerh vletvanrmr aaskagkdsf dtfndvqdhv lmaarthmdr vileafvagi
      121 dacedphaaa lltqvcdlyc lssleadagw fqqhnrmsat rakrsllrsm raarssaatr
      181 srslrawasr wsgwaaqc
//
LOCUS       WP_235244170             191 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235244170
VERSION     WP_235244170.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..191
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=21004
     Region          <49..174
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(62,92,98,113)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mtraaemsqi plvpedlasg dlfpagrldq dlqqvdlrer nswrlllhev ssvelletql
       61 vnavapfiin arlrplmdrt egshkhvvnv savegqfyrr fkttrhphtn makaalnmmt
      121 rtaatdyrqs gihmnsvdtg wvsdedprav asrkreehgf hppldivdga aglltpslma
      181 ltpaitcgas s
//
LOCUS       WP_235244071             348 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: alanine racemase [Fusobacterium].
ACCESSION   WP_235244071
VERSION     WP_235244071.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium
  ORGANISM  Fusobacterium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae.
REFERENCE   1  (residues 1 to 348)
  AUTHORS   Shaw,J.P., Petsko,G.A. and Ringe,D.
  TITLE     Determination of the structure of alanine racemase from Bacillus
            stearothermophilus at 1.9-A resolution
  JOURNAL   Biochemistry 36 (6), 1329-1342 (1997)
   PUBMED   9063881
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013345.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01168.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Fusobacterium"
                     /db_xref="taxon:848"
     Protein         1..348
                     /product="alanine racemase"
                     /EC_number="5.1.1.1"
                     /calculated_mol_wt=39850
     Region          3..346
                     /region_name="PLPDE_III"
                     /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
                     Enzymes; cl00261"
                     /db_xref="CDD:469695"
     Site            order(28,30,79,122,155,157,209..212)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate (PLP) binding site [chemical
                     binding]"
                     /db_xref="CDD:143484"
     Site            30
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:143484"
ORIGIN      
        1 mkiliseenf ihninflkkk ydrdilpvik angyghdlkl ivslllkyki nqcvvarlse
       61 aleilnsqsi pkdfkilvle sipeenfgyi lnypqilata nsiddilkll enkiptnqiq
      121 ikidlgfgrn gittdeipll keiiskentk fsgifshlfs vpykkgieli nifenilntl
      181 gknrfsmihl qnslgisnyg tipftthlrp gmfiygfyed gayeknlkkv fslkgnftai
      241 kniknidyla ytpkeklktt senigfvkig ygdgflklne gsfvkikdkf ykillitmdn
      301 tfievdenin vdneveiyfd fnstkkhlki niceflpils sriprilk
//
LOCUS       WP_235244225             177 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235244225
VERSION     WP_235244225.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024898.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13508.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..177
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=19127
     Region          5..>148
                     /region_name="mycothiol_MshD"
                     /note="mycothiol synthase; TIGR03448"
                     /db_xref="CDD:132489"
ORIGIN      
        1 meiltesale pkvgadvlsv avraatfdgv kplseqtvld igrmpaevas daqnrhlvvv
       61 dqpgeinasv layahlerge geaasaeivv hpdhrrqghg gallkalrel spkvrvwshg
      121 qtdaakafae hfdlqvvrel lqmsrplgpm rrpwrrchcl tdflcaplrs aamsstg
//
LOCUS       WP_235244229             550 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: LytS/YhcK type 5TM receptor domain-containing protein
            [Fusobacterium].
ACCESSION   WP_235244229
VERSION     WP_235244229.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium
  ORGANISM  Fusobacterium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae.
REFERENCE   1  (residues 1 to 550)
  AUTHORS   Anantharaman,V. and Aravind,L.
  TITLE     Application of comparative genomics in the identification and
            analysis of novel families of membrane-associated receptors in
            bacteria
  JOURNAL   BMC Genomics 4 (1), 34 (2003)
   PUBMED   12914674
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019314.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07694.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Fusobacterium"
                     /db_xref="taxon:848"
     Protein         1..550
                     /product="LytS/YhcK type 5TM receptor domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /GO_process="GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /calculated_mol_wt=61461
     Region          29..182
                     /region_name="5TM-5TMR_LYT"
                     /note="5TMR of 5TMR-LYT; pfam07694"
                     /db_xref="CDD:429599"
     Region          224..346
                     /region_name="GAF_3"
                     /note="GAF domain; pfam13492"
                     /db_xref="CDD:433253"
     Region          <337..543
                     /region_name="LytS"
                     /note="Sensor histidine kinase, LytS/YehU family [Signal
                     transduction mechanisms]; COG3275"
                     /db_xref="CDD:442506"
ORIGIN      
        1 mfnlvsalln nlgyiiiiaf lftriqssrn iftkenynak diimlslffg glaiigtysg
       61 inykgsiant rnigviaggl mvspwvgifa giiagihrff llngqftaip caistifggf
      121 fvaylskyin eknkyiygff agfvvenlsm lliyllgadk ahaleivkai yipmilanal
      181 gvpiviiiie siieekeima gkqaklslei aektlpyfsn ggslnevcki imealdaksv
      241 ilsnekfivg shsfsdefrv dhvevqseea kkvlstgemf vanrifnkqe fecvegniks
      301 yiivplyqnk kvsgtlkvyf dkfgqitesk knlivglsql istqleltkl enfkamarda
      361 nfkmlqtqin phflfnalnt issfirinpe kardvilnls tilrfnlenf drlvpvekei
      421 eqvkayvnie qarfnnkikv dysidddiln fqipsliiqp lvensikhgl lpkreggsvf
      481 igikkiennh ikitvkddgv gipqeiinsi ddvdiksigl knvharlkll ygkgleikrl
      541 aqgteinydi
//
LOCUS       WP_235244285             131 aa            linear   BCT 02-MAR-2025
DEFINITION  biotin/lipoyl-containing protein [Fusobacterium perfoetens].
ACCESSION   WP_235244285
VERSION     WP_235244285.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012584.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00364.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..131
                     /product="biotin/lipoyl-containing protein"
                     /calculated_mol_wt=12958
     Region          <5..131
                     /region_name="PRK12999"
                     /note="pyruvate carboxylase; Reviewed; cl39082"
                     /db_xref="CDD:476865"
ORIGIN      
        1 mikayrvnvn gkvyevevee itaggqqtva aapapapvap kpasvapapa ptpapapkaa
       61 atgeiveapm pgtivdikvk vgdtvkegdl vavieamkme tdlfstksgv vtavnagkga
      121 svntgdaiit l
//
LOCUS       WP_235244306             347 aa            linear   BCT 02-MAR-2025
DEFINITION  alkyl sulfatase dimerization domain-containing protein
            [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235244306
VERSION     WP_235244306.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 347)
  AUTHORS   Hagelueken,G., Adams,T.M., Wiehlmann,L., Widow,U., Kolmar,H.,
            Tummler,B., Heinz,D.W. and Schubert,W.D.
  TITLE     The crystal structure of SdsA1, an alkylsulfatase from Pseudomonas
            aeruginosa, defines a third class of sulfatases
  JOURNAL   Proc Natl Acad Sci U S A 103 (20), 7631-7636 (2006)
   PUBMED   16684886
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2006 Jul 11;103(28):10824]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026213.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14863.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..347
                     /product="alkyl sulfatase dimerization domain-containing
                     protein"
                     /GO_function="GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /calculated_mol_wt=38001
     Region          <1..345
                     /region_name="BDS1"
                     /note="Alkyl sulfatase BDS1 and related hydrolases,
                     metallo-beta-lactamase superfamily [Secondary metabolites
                     biosynthesis, transport and catabolism]; COG2015"
                     /db_xref="CDD:441618"
ORIGIN      
        1 maenathtlh nvltlrgavv rdphvwsayl teaiatfsgr tdvafashhw ptwgqdrvdt
       61 flstqrdlya ylhdqtlrla nqghtgseia emftlspale qawnahgyyg svshnvkaiy
      121 qrylgwfdgn parlwphppa elssryveai ggldrvvgla qtafdagdfr waatlldhai
      181 ftnehhqaar dlyadtleql gygsengswr nfflsgstel rgsnfgtptk tdapaimaql
      241 satqlfdaia vavngpaawn ldlvlditil dtetnyrvtl rngvlvyleq earedaaati
      301 rlqksrllal vagdatspgi daegddslsq lmsvldpgdd nfnivtp
//
LOCUS       WP_235244318             260 aa            linear   BCT 02-MAR-2025
DEFINITION  CocE/NonD family hydrolase C-terminal non-catalytic
            domain-containing protein [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235244318
VERSION     WP_235244318.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020119.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08530.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..260
                     /product="CocE/NonD family hydrolase C-terminal
                     non-catalytic domain-containing protein"
                     /GO_function="GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=27890
     Region          <2..116
                     /region_name="COG2936"
                     /note="Predicted acyl esterase [General function
                     prediction only]"
                     /db_xref="CDD:442179"
ORIGIN      
        1 mgqpqvdltv asatnagqvt vrlsdvrpdg gsalitygvl nlrlrddpar lspvqpgepm
       61 eitvgldmtg yrlgvghrlr vsissanfpl ltpppvrsdl qvlpgeprlt lpvftgqdlt
      121 dplsepeaaa gahvtthraa sprrtvstdi atglttvtie ddlgdvtfed hglrvaqqcr
      181 eeytvhpdda sryeaniswr yqvgrdgafn asvisgyrlt cdedtficrp skrlvgmarr
      241 cssesgtsrs hgwpprsgga
//
LOCUS       WP_235244384              93 aa            linear   BCT 02-MAR-2025
DEFINITION  antA/AntB antirepressor family protein [Fusobacterium perfoetens].
ACCESSION   WP_235244384
VERSION     WP_235244384.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 93)
  AUTHORS   Sandt,C.H., Hopper,J.E. and Hill,C.W.
  TITLE     Activation of prophage eib genes for immunoglobulin-binding
            proteins by genes from the IbrAB genetic island of Escherichia coli
            ECOR-9
  JOURNAL   J Bacteriol 184 (13), 3640-3648 (2002)
   PUBMED   12057959
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019945.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08346.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..93
                     /product="antA/AntB antirepressor family protein"
                     /calculated_mol_wt=11345
     Region          7..>92
                     /region_name="COG3561"
                     /note="Phage anti-repressor protein Ant [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:442782"
ORIGIN      
        1 mqergreqfv ngrelhrfle vltpykkwfd rmcdygfien kdfiayvqks tlannreytk
       61 tdylmkisma keismlqrne kdkeihfyfi kck
//
LOCUS       WP_235244404             227 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator
            [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235244404
VERSION     WP_235244404.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..227
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=24248
     Region          1..225
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mseesqfrvv lvddhrifra gvraelaqms qdleivgeag nveaaidvia qtqpdvvlld
       61 vhlpgggghg gadvlkgsgg vrslagqpvr flalsvsdaa ddvitvirsg argyvtktis
      121 sgdlasaivr vaegdavfsp rlagfvldaf gaaageiaev deeldrlskr erevmrliar
      181 gyqykevake lyisvktvet hvsavlrklq lssrheltaw amdrrll
//
LOCUS       WP_235244389             186 aa            linear   BCT 02-MAR-2025
DEFINITION  CBS domain-containing protein [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235244389
VERSION     WP_235244389.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Scott,J.W., Hawley,S.A., Green,K.A., Anis,M., Stewart,G.,
            Scullion,G.A., Norman,D.G. and Hardie,D.G.
  TITLE     CBS domains form energy-sensing modules whose binding of adenosine
            ligands is disrupted by disease mutations
  JOURNAL   J Clin Invest 113 (2), 274-284 (2004)
   PUBMED   14722619
REFERENCE   2  (residues 1 to 186)
  AUTHORS   Kemp,B.E.
  TITLE     Bateman domains and adenosine derivatives form a binding contract
  JOURNAL   J Clin Invest 113 (2), 182-184 (2004)
   PUBMED   14722609
REFERENCE   3  (residues 1 to 186)
  AUTHORS   Janosik,M., Kery,V., Gaustadnes,M., Maclean,K.N. and Kraus,J.P.
  TITLE     Regulation of human cystathionine beta-synthase by
            S-adenosyl-L-methionine: evidence for two catalytically active
            conformations involving an autoinhibitory domain in the C-terminal
            region
  JOURNAL   Biochemistry 40 (35), 10625-10633 (2001)
   PUBMED   11524006
REFERENCE   4  (residues 1 to 186)
  AUTHORS   Zhang,R., Evans,G., Rotella,F.J., Westbrook,E.M., Beno,D.,
            Huberman,E., Joachimiak,A. and Collart,F.R.
  TITLE     Characteristics and crystal structure of bacterial
            inosine-5'-monophosphate dehydrogenase
  JOURNAL   Biochemistry 38 (15), 4691-4700 (1999)
   PUBMED   10200156
REFERENCE   5  (residues 1 to 186)
  AUTHORS   Ponting,C.P.
  TITLE     CBS domains in CIC chloride channels implicated in myotonia and
            nephrolithiasis (kidney stones)
  JOURNAL   J Mol Med (Berl) 75 (3), 160-163 (1997)
   PUBMED   9106071
REFERENCE   6  (residues 1 to 186)
  AUTHORS   Bateman,A.
  TITLE     The structure of a domain common to archaebacteria and the
            homocystinuria disease protein
  JOURNAL   Trends Biochem Sci 22 (1), 12-13 (1997)
   PUBMED   9020585
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012780.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00571.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..186
                     /product="CBS domain-containing protein"
                     /calculated_mol_wt=20196
     Region          <1..42
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Region          49..171
                     /region_name="COG3448"
                     /note="CBS-domain-containing membrane protein [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:442671"
ORIGIN      
        1 mgdkivvlke qshiaqfasp eeilsspadd yvsdfigqga slkrlnltri rdiematdtp
       61 tgtaheelst lrqrlaespw stmmilddqr rplrwvgard lsrahagedi aklglpatat
      121 vepqatlsda lnelitsngg vaivvdgsgv fqgvvdiesi ltavrtmree nskfylaqke
      181 fteaid
//
LOCUS       WP_235244466             288 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Ornithinimicrobium
            sp. INDO-MA30-4].
ACCESSION   WP_235244466
VERSION     WP_235244466.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 288)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 288)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 288)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 288)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..288
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=31246
     Region          1..>260
                     /region_name="AppF"
                     /note="ABC-type oligopeptide transport system, ATPase
                     component [Amino acid transport and metabolism]; COG4608"
                     /db_xref="CDD:443658"
ORIGIN      
        1 mtepilkltd vrrefrrprt slrtpppvvr avggvdleva pgerlgivge sgsgkstllr
       61 llsgldqpts gqievqgrrv dgqssrqlkw lretmqlvfq dpmssldprm rvrdiiaepl
      121 vaagmsaade reervvtlle avglpkdaid ryphqfsggq rqrisvaral apqpkilvad
      181 epvsaldvsv raqvlnlidd vvegfdltli fvshdlsvvr hvcdrvavmr rgefvevaat
      241 ealfadpqha ytkqliaaip tlsaalsgrt aaaladevnq qaggenrd
//
LOCUS       WP_235244471              71 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerate kinase [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235244471
VERSION     WP_235244471.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 71)
  AUTHORS   Cusa,E., Obradors,N., Baldoma,L., Badia,J. and Aguilar,J.
  TITLE     Genetic analysis of a chromosomal region containing genes required
            for assimilation of allantoin nitrogen and linked glyoxylate
            metabolism in Escherichia coli
  JOURNAL   J Bacteriol 181 (24), 7479-7484 (1999)
   PUBMED   10601204
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014634.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02595.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..71
                     /product="glycerate kinase"
                     /GO_function="GO:0008887 - glycerate kinase activity
                     [Evidence IEA]"
                     /GO_process="GO:0031388 - organic acid phosphorylation
                     [Evidence IEA]"
                     /calculated_mol_wt=7059
     Region          9..>68
                     /region_name="GlxK"
                     /note="Glycerate kinase [Carbohydrate transport and
                     metabolism]; COG1929"
                     /db_xref="CDD:441532"
ORIGIN      
        1 msmktpstvl aapdkfrgsl tgpevaeaia agaqeahwst vlmpladgge glvealggat
       61 htsevtgpke r
//
LOCUS       WP_235244492             128 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235244492
VERSION     WP_235244492.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..128
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=14268
     Region          1..104
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mcqltyktgw dlpggvvdrl espasavvre vreelavqvr neglitvdwl ppyrqwddal
       61 lclyslgqhp dileeavfet aeivaahwcd lemarehaap yvvrlleqat gqdpipdyle
      121 dgvppdlv
//
LOCUS       WP_235244496              90 aa            linear   BCT 02-MAR-2025
DEFINITION  aromatic acid exporter family protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235244496
VERSION     WP_235244496.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017856.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06081.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..90
                     /product="aromatic acid exporter family protein"
                     /calculated_mol_wt=9319
     Region          26..>88
                     /region_name="YgaE"
                     /note="Uncharacterized membrane protein YgaE,
                     UPF0421/DUF939 family [Function unknown]; COG4129"
                     /db_xref="CDD:443305"
ORIGIN      
        1 mstidikqlr atlgshvhlp glttdalqil kavvaavvaw viahhllgle aaflapwtal
       61 ltvhatvhrt vwrggqtvia tvagiflaag
//
LOCUS       WP_235244527              44 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235244527
VERSION     WP_235244527.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 44)
  AUTHORS   Todone,F., Vanoni,M.A., Mozzarelli,A., Bolognesi,M., Coda,A.,
            Curti,B. and Mattevi,A.
  TITLE     Active site plasticity in D-amino acid oxidase: a crystallographic
            analysis
  JOURNAL   Biochemistry 36 (19), 5853-5860 (1997)
   PUBMED   9153426
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013434.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01266.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..44
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..44
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=4561
     Region          7..>43
                     /region_name="Ppro0129"
                     /note="Predicted flavin-containing amine oxidase [General
                     function prediction only]; COG2907"
                     /db_xref="CDD:442151"
ORIGIN      
        1 mtqqpsvavi gsgisgltaa yelrethrvs vyevesrlgg hpha
//
LOCUS       WP_235244538             101 aa            linear   BCT 02-MAR-2025
DEFINITION  CDP-alcohol phosphatidyltransferase family protein
            [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235244538
VERSION     WP_235244538.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 101)
  AUTHORS   Morein,S., Trouard,T.P., Hauksson,J.B., Rilfors,L., Arvidson,G. and
            Lindblom,G.
  TITLE     Two-dimensional 1H-NMR of transmembrane peptides from Escherichia
            coli phosphatidylglycerophosphate synthase in micelles
  JOURNAL   Eur J Biochem 241 (2), 489-497 (1996)
   PUBMED   8917447
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013250.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01066.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..101
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0016780 - phosphotransferase activity,
                     for other substituted phosphate groups [Evidence IEA]"
                     /GO_process="GO:0008654 - phospholipid biosynthetic
                     process [Evidence IEA]"
                     /calculated_mol_wt=10467
     Region          24..>79
                     /region_name="EPT1"
                     /note="sn-1,2-diacylglycerol ethanolamine- and
                     cholinephosphotranferases [Lipid transport and
                     metabolism]; COG5050"
                     /db_xref="CDD:444050"
ORIGIN      
        1 mldhsvrqvl dpvmkasaka ldrpwispdr lsvaglvigl asagsaalqw wglalvlwll
       61 nrlvdgldgp larrrkaggt taggrshnse aggfltslpt s
//
LOCUS       WP_235244541              71 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235244541
VERSION     WP_235244541.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 71)
  AUTHORS   Mande,S.S., Sarfaty,S., Allen,M.D., Perham,R.N. and Hol,W.G.
  TITLE     Protein-protein interactions in the pyruvate dehydrogenase
            multienzyme complex: dihydrolipoamide dehydrogenase complexed with
            the binding domain of dihydrolipoamide acetyltransferase
  JOURNAL   Structure 4 (3), 277-286 (1996)
   PUBMED   8805537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07992.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..71
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=7268
     Region          7..>53
                     /region_name="Lpd"
                     /note="Dihydrolipoamide dehydrogenase (E3) component of
                     pyruvate/2-oxoglutarate dehydrogenase complex or
                     glutathione oxidoreductase [Energy production and
                     conversion]; COG1249"
                     /db_xref="CDD:440861"
ORIGIN      
        1 mdnqpwdlvv vgggtaglvg aktaaslgar vlmierenpg gdclwtgcvp sklssllalr
       61 rpllatrprl a
//
LOCUS       WP_235244561             197 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6318 family protein [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235244561
VERSION     WP_235244561.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040060.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19843.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..197
                     /product="DUF6318 family protein"
                     /calculated_mol_wt=20473
     Region          48..191
                     /region_name="DUF6318"
                     /note="Family of unknown function (DUF6318); pfam19843"
                     /db_xref="CDD:437675"
ORIGIN      
        1 mrryfvasal alglalsacs dagepsmpps gdgarsttav psddqvvatt eapskaaept
       61 amptsemees vegaeafaty ymslinatvs dprtglftef aspscegcln lensvsdlqa
      121 dglsgpdtvi sysepriemt gstyvaqfda nqdaydlvds ngtvvrsveg aqgllvqlnl
      181 rwdttgwvvd sfasasv
//
LOCUS       WP_235244581             121 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235244581
VERSION     WP_235244581.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..121
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=12872
     Region          <4..116
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 maseavrhgv dghvdfpgfv dpiefakkid vvaqlsiwen csytlldaiv agqgvvasnv
       61 ggnpeilprh clvdpdqpaq vaqallsqaq qpelrpqlpa dwpsvsamte qiadiyaevt
      121 q
//
LOCUS       WP_235244660             393 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Ornithinimicrobium
            sp. INDO-MA30-4].
ACCESSION   WP_235244660
VERSION     WP_235244660.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 393)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 393)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 393)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 393)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..393
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=41526
     Region          <1..384
                     /region_name="CydD"
                     /note="ABC-type transport system involved in cytochrome bd
                     biosynthesis, ATPase and permease components [Energy
                     production and conversion, Posttranslational modification,
                     protein turnover, chaperones]; COG4988"
                     /db_xref="CDD:444012"
ORIGIN      
        1 mlallallwv dpisalivll tlpllpffaa ligmateret qrrwqrladl sghfsdvmkg
       61 lptlvnygra erqteviaqv ngahrratmr tlrlafmssa alellaslsv aivavtvglr
      121 ltygsmelfa gllaillape aywpirkvga efhaaadgvq alddvanelv sddvdpkaed
      181 aqssqsahli dpggaavsmq gvtyrypaaa neviggfaas wdrglhtvtg isgagkttll
      241 eiiaglrtan tgvvisgdvh fvtgrpylpa gtlrnaltlg neasdaaiwe alqdvdlerw
      301 ahglpseldt afgedgfgms agqrarivla raalsdtsvi lldeptahld ptataqvhea
      361 llrlassrcv iavthqsalm aiadtqrell aat
//
LOCUS       WP_235243601             145 aa            linear   BCT 02-MAR-2025
DEFINITION  elongation factor 1-alpha C-terminal domain-related protein,
            partial [Escherichia coli].
ACCESSION   WP_235243601
VERSION     WP_235243601.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 145)
  AUTHORS   Cheng,Z., Saito,K., Pisarev,A.V., Wada,M., Pisareva,V.P.,
            Pestova,T.V., Gajda,M., Round,A., Kong,C., Lim,M., Nakamura,Y.,
            Svergun,D.I., Ito,K. and Song,H.
  TITLE     Structural insights into eRF3 and stop codon recognition by eRF1
  JOURNAL   Genes Dev 23 (9), 1106-1118 (2009)
   PUBMED   19417105
REFERENCE   2  (residues 1 to 145)
  AUTHORS   Mougous,J.D., Lee,D.H., Hubbard,S.C., Schelle,M.W., Vocadlo,D.J.,
            Berger,J.M. and Bertozzi,C.R.
  TITLE     Molecular basis for G protein control of the prokaryotic ATP
            sulfurylase
  JOURNAL   Mol Cell 21 (1), 109-122 (2006)
   PUBMED   16387658
REFERENCE   3  (residues 1 to 145)
  AUTHORS   Kong,C., Ito,K., Walsh,M.A., Wada,M., Liu,Y., Kumar,S., Barford,D.,
            Nakamura,Y. and Song,H.
  TITLE     Crystal structure and functional analysis of the eukaryotic class
            II release factor eRF3 from S. pombe
  JOURNAL   Mol Cell 14 (2), 233-245 (2004)
   PUBMED   15099522
REFERENCE   4  (residues 1 to 145)
  AUTHORS   Vitagliano,L., Masullo,M., Sica,F., Zagari,A. and Bocchini,V.
  TITLE     The crystal structure of Sulfolobus solfataricus elongation factor
            1alpha in complex with GDP reveals novel features in nucleotide
            binding and exchange
  JOURNAL   EMBO J 20 (19), 5305-5311 (2001)
   PUBMED   11574461
REFERENCE   5  (residues 1 to 145)
  AUTHORS   Andersen,G.R., Pedersen,L., Valente,L., Chatterjee,I., Kinzy,T.G.,
            Kjeldgaard,M. and Nyborg,J.
  TITLE     Structural basis for nucleotide exchange and competition with tRNA
            in the yeast elongation factor complex eEF1A:eEF1Balpha
  JOURNAL   Mol Cell 6 (5), 1261-1266 (2000)
   PUBMED   11106763
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046776.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22594.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>145
                     /product="elongation factor 1-alpha C-terminal
                     domain-related protein"
     Region          <1..142
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 vsvkdlkrgf vasdskndpa keaadftaqv ivlnhpgqin agytpvldch tahiackfye
       61 llekidrrtg kvletgpkti ksgdsctvkm vpskpmcvet fqkyaplgrf avrdmkqtva
      121 vgvikdvnkk egggkttkaa ekalk
//
LOCUS       WP_235244679             300 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235244679
VERSION     WP_235244679.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 300)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 300)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..300
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=31940
     Region          26..299
                     /region_name="HisC"
                     /note="Histidinol-phosphate/aromatic aminotransferase or
                     cobyric acid decarboxylase [Amino acid transport and
                     metabolism]; COG0079"
                     /db_xref="CDD:439849"
ORIGIN      
        1 mtsinlpppg ahggdgpaia aalgldpqsv ldlsqnlnpf ppqfdelvsr hldaighypd
       61 arraermlae vigvdaerli ltnggseaih ivateiggtv arepefglhp rrpgvrgpiw
      121 rsnphsptgv lagprnradv wdeaffalat gawsagrpem tvgsltktfa cpglrlgyvi
      181 apegfdparl rqhqphwsvs tlalavlpdl lehadlpgla mqiailrgel rrlfvdhglt
      241 vragdapwvl vsgtdlrtel apygivvrdc tsfgmpgvfr vavpnsegls rlayaldqvg
//
LOCUS       WP_235244692             136 aa            linear   BCT 02-MAR-2025
DEFINITION  iron chelate uptake ABC transporter family permease subunit
            [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235244692
VERSION     WP_235244692.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 136)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013219.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01032.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..136
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /calculated_mol_wt=14377
     Region          <1..136
                     /region_name="CeuC"
                     /note="ABC-type enterochelin transport system, permease
                     component [Inorganic ion transport and metabolism];
                     COG4605"
                     /db_xref="CDD:443655"
ORIGIN      
        1 mtgaatafgl lalwpqlrkl dvvdlghdgc valgvdyhrt vrttlvivtl lvaastalvg
       61 pmiflgliva nlarqalpth rhtslvvasa ligllftvgg qflvthvfdl qtpisvvinl
      121 vgglyfivll lrtdrl
//
LOCUS       WP_235244698             199 aa            linear   BCT 02-MAR-2025
DEFINITION  redoxin domain-containing protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235244698
VERSION     WP_235244698.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 199)
  AUTHORS   Chae,H.Z., Robison,K., Poole,L.B., Church,G., Storz,G. and
            Rhee,S.G.
  TITLE     Cloning and sequencing of thiol-specific antioxidant from mammalian
            brain: alkyl hydroperoxide reductase and thiol-specific antioxidant
            define a large family of antioxidant enzymes
  JOURNAL   Proc Natl Acad Sci U S A 91 (15), 7017-7021 (1994)
   PUBMED   8041738
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012787.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00578.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..199
                     /product="redoxin domain-containing protein"
                     /GO_function="GO:0016209 - antioxidant activity [Evidence
                     IEA]"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=21200
     Region          8..143
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 mtlvptqqvp aldlplnggg sttdlnlgtg adgrftmvvf yrglhcpvcr kqlgeinrrl
       61 ddlaeagvgr vvaismedea rsasvseewk ldklsvahgl teadarewgl fishsikdge
      121 pevfsepgmf ildsdgslfw savatmpfgr ppldeviagl qfaqsdgypa rgnhrasatl
      181 mrgreglgts llpgrssae
//
LOCUS       WP_235244705             222 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235244705
VERSION     WP_235244705.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 222)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 222)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..222
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=23045
     Region          18..>222
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mstviqlfte itdhlstlse yagkrvlsia isgmgetgfv ldsagdpllq giawfdprga
       61 aevaalpeai raefagrtgv pwgvqvtaak llflanrgle lqgtrwaslp eylafaltgr
      121 lvsdvslsar tglidqdtgr pwpamldhlg vdesfvpeiv aagtplgtta evglpwgfqa
      181 atvcvaghdh lvsavsgslt sgdgyhvslg taevllrsst sl
//
LOCUS       WP_235244747              90 aa            linear   BCT 02-MAR-2025
DEFINITION  CBS domain-containing protein [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235244747
VERSION     WP_235244747.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 90)
  AUTHORS   Scott,J.W., Hawley,S.A., Green,K.A., Anis,M., Stewart,G.,
            Scullion,G.A., Norman,D.G. and Hardie,D.G.
  TITLE     CBS domains form energy-sensing modules whose binding of adenosine
            ligands is disrupted by disease mutations
  JOURNAL   J Clin Invest 113 (2), 274-284 (2004)
   PUBMED   14722619
REFERENCE   2  (residues 1 to 90)
  AUTHORS   Kemp,B.E.
  TITLE     Bateman domains and adenosine derivatives form a binding contract
  JOURNAL   J Clin Invest 113 (2), 182-184 (2004)
   PUBMED   14722609
REFERENCE   3  (residues 1 to 90)
  AUTHORS   Janosik,M., Kery,V., Gaustadnes,M., Maclean,K.N. and Kraus,J.P.
  TITLE     Regulation of human cystathionine beta-synthase by
            S-adenosyl-L-methionine: evidence for two catalytically active
            conformations involving an autoinhibitory domain in the C-terminal
            region
  JOURNAL   Biochemistry 40 (35), 10625-10633 (2001)
   PUBMED   11524006
REFERENCE   4  (residues 1 to 90)
  AUTHORS   Zhang,R., Evans,G., Rotella,F.J., Westbrook,E.M., Beno,D.,
            Huberman,E., Joachimiak,A. and Collart,F.R.
  TITLE     Characteristics and crystal structure of bacterial
            inosine-5'-monophosphate dehydrogenase
  JOURNAL   Biochemistry 38 (15), 4691-4700 (1999)
   PUBMED   10200156
REFERENCE   5  (residues 1 to 90)
  AUTHORS   Ponting,C.P.
  TITLE     CBS domains in CIC chloride channels implicated in myotonia and
            nephrolithiasis (kidney stones)
  JOURNAL   J Mol Med (Berl) 75 (3), 160-163 (1997)
   PUBMED   9106071
REFERENCE   6  (residues 1 to 90)
  AUTHORS   Bateman,A.
  TITLE     The structure of a domain common to archaebacteria and the
            homocystinuria disease protein
  JOURNAL   Trends Biochem Sci 22 (1), 12-13 (1997)
   PUBMED   9020585
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012780.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00571.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..90
                     /product="CBS domain-containing protein"
                     /calculated_mol_wt=9570
     Region          <11..>75
                     /region_name="TlyC"
                     /note="Hemolysin-related protein, contains CBS domains,
                     UPF0053 family [General function prediction only];
                     COG1253"
                     /db_xref="CDD:440865"
ORIGIN      
        1 mldddvappr vihvrdtllh tgdeqaeala rpalvlpsnt pvyealakmr esgeqlvvlr
       61 ddgrlvglvs vtdimhrilp hasgsglvan
//
LOCUS       WP_235244778             325 aa            linear   BCT 02-MAR-2025
DEFINITION  TniB family NTP-binding protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235244778
VERSION     WP_235244778.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 325)
  AUTHORS   Kholodii,G.Y., Mindlin,S.Z., Bass,I.A., Yurieva,O.V.,
            Minakhina,S.V. and Nikiforov,V.G.
  TITLE     Four genes, two ends, and a res region are involved in
            transposition of Tn5053: a paradigm for a novel family of
            transposons carrying either a mer operon or an integron
  JOURNAL   Mol Microbiol 17 (6), 1189-1200 (1995)
   PUBMED   8594337
REFERENCE   2  (residues 1 to 325)
  AUTHORS   Radstrom,P., Skold,O., Swedberg,G., Flensburg,J., Roy,P.H. and
            Sundstrom,L.
  TITLE     Transposon Tn5090 of plasmid R751, which carries an integron, is
            related to Tn7, Mu, and the retroelements
  JOURNAL   J Bacteriol 176 (11), 3257-3268 (1994)
   PUBMED   8195081
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05621.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..325
                     /product="TniB family NTP-binding protein"
                     /calculated_mol_wt=35553
     Region          <104..208
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 mpqniddwke lvsgmnpppq qgpvvtdalr rkfdihnqrv gtiatrdths vrtairrahf
       61 endhsaygsa tcvilngqpl sgkthaalfc afsetreiws alphepddpr hdrcipwiyv
      121 evpklargls llraiwtfcg cpplrassss adyleairrl apriglrgii iddghgigar
      181 qskesrllad ilkglitglp ativlvgtgf hesgvlqgsa geqvrlrgac widigqwalp
      241 kpgevgdwer lglgltqrlm lpsprgavhl tkrrvlhrlv dgsqhrpgla viwakraasy
      301 aiwhdtdldl dalnathagl pmgte
//
LOCUS       WP_235244585             520 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylneuraminate synthase family protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235244585
VERSION     WP_235244585.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 520)
  AUTHORS   Nakata,D., Close,B.E., Colley,K.J., Matsuda,T. and Kitajima,K.
  TITLE     Molecular cloning and expression of the mouse N-acetylneuraminic
            acid 9-phosphate synthase which does not have deaminoneuraminic
            acid (KDN) 9-phosphate synthase activity
  JOURNAL   Biochem Biophys Res Commun 273 (2), 642-648 (2000)
   PUBMED   10873658
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015087.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03102.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..520
                     /product="N-acetylneuraminate synthase family protein"
                     /GO_process="GO:0016051 - carbohydrate biosynthetic
                     process [Evidence IEA]"
                     /calculated_mol_wt=57179
     Region          2..119
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
     Site            order(6,8..10,32..34,97,110,112,114..115,118)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:341409"
     Region          6..71
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341409"
     Site            order(32,44,49..50,53,76,97..99,114)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:341409"
     Region          76..118
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341409"
     Region          129..461
                     /region_name="SpsE"
                     /note="Sialic acid synthase SpsE, contains C-terminal SAF
                     domain [Cell wall/membrane/envelope biogenesis]; COG2089"
                     /db_xref="CDD:441692"
ORIGIN      
        1 miiernlapy ivygedpvls alekitanqa hivfvvsehg hhlgalsdgd frrwlsgqdn
       61 vdltapcrev antdsltvas tesaheierl frpgivhipm vdeqqhitai ainrsdqfri
      121 grytvspdhp avliaeigin hqgsvemakh lvdlaaeaga dvvkfqlrdm salyrqsgta
      181 tnsgedlgpq ytldllakyn lsaeqlfevf dhrkerdidv ictpwdepsv talmdygipa
      241 lkvasadmtn halltkmgsy gvplvlstgm steteikqtv dvvrdtgapf amlhcqstyp
      301 apykdvnlay mqrlgelsqs pvgysgherg fhvpvaaval gakviekhft tdrslegndh
      361 kvsllphefa emvkrvreie eamgsgaprv vstgemmnrv nlakslvakg pieagqvisr
      421 edidikspgr glqpnslqql igrtaqrsla sgdffyasdl sdtvatgrdf tfnrpwglpv
      481 ryhdvetlte nstpdflsst spirtwswtr lrflatkscr
//
LOCUS       WP_235244840             204 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235244840
VERSION     WP_235244840.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 204)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..204
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /calculated_mol_wt=21906
     Region          <2..191
                     /region_name="PRK09124"
                     /note="ubiquinone-dependent pyruvate dehydrogenase"
                     /db_xref="CDD:181661"
ORIGIN      
        1 mirpelladv verhadsnai fttdtgmstv wlsrfvrmss drrllgsynl gsmanampma
       61 lgaqaldrdr qviafcgdgg lsmlmgdlit avseelpvki fvfnngrlgm vklemeqvgl
      121 pefgtvlnnp dfakvaeaig mrgirvtnph dvdgavveal ahpgpvlldv vtnpdeialp
      181 pkptleqgwg faiakmkefa vspe
//
LOCUS       WP_235244852             221 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235244852
VERSION     WP_235244852.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 221)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 221)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 221)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..221
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=22908
ORIGIN      
        1 matqvshalv tasiegvgqq lfalslraeg vrvlpsewka lglqeistgt veldnaaaep
       61 vgppgwyler pgfawggvav aaawfgaaaa lagalkaaaa rrtpdqialm hlgccdaalh
      121 salltlreaa ramddpqtts seaallasrt racvaevaer vitsvghalg pgplafdeph
      181 lrrvadltly lrqhhaerdl arlgslvvad vhvdsphgaa k
//
LOCUS       WP_235244856             455 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235244856
VERSION     WP_235244856.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 455)
  AUTHORS   Mengin-Lecreulx,D., Texier,L., Rousseau,M. and van Heijenoort,J.
  TITLE     The murG gene of Escherichia coli codes for the
            UDP-N-acetylglucosamine: N-acetylmuramyl-(pentapeptide)
            pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
            involved in the membrane steps of peptidoglycan synthesis
  JOURNAL   J Bacteriol 173 (15), 4625-4636 (1991)
   PUBMED   1649817
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016027.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04101.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..455
                     /product="glycosyltransferase"
                     /GO_function="GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=48734
     Region          1..316
                     /region_name="COG4671"
                     /note="Predicted glycosyl transferase [General function
                     prediction only]"
                     /db_xref="CDD:443708"
ORIGIN      
        1 mvigyyvhdh gaghltrakv iaanlrqrgh dvvflgsdlq eeagitlprd ndgsepfvdp
       61 dafgalhwap lahagfsakm aaiatwvler rpnifvvdvs aevvtllrll gvntvlvaqp
      121 gdrsddahtl ayrcataila pwppeaspnp alqpytekvf htggisglna trqsgstgvl
      181 lsgrdgtttg dtlqhlskql pdmawveigg shwvddvgav laraavvvth cgqnaiadta
      241 aldipavlyp qarpheeqvy lgaelsrlgl avsvgsqdla rldwatavte airrpsqwar
      301 wqtvdaasra adiiervgas krpatieevk vakvcvvtva rgrhthlrhq lrllsqsnpd
      361 sdhvvvaidd reipkvvaah rgdrevdvla vnghelglpl ayarnegvqr altaeptslc
      421 cststawsal hpksvcrrsp wvwsgtvvra sdipt
//
LOCUS       WP_235244870             565 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235244870
VERSION     WP_235244870.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 565)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..565
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=59990
     Region          10..492
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     Site            order(164..168,175,191,240..243,246,249..250,276..278,314,
                     392,394,426,473)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143397"
     Site            order(168,276,311,314)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143397"
ORIGIN      
        1 mtiqtavnld atvatvnaaq rdwaampvaq rrkmllevga lcadnaqrwv niaaeikglp
       61 assplvgeew ssgpyavqty vealaetlsr ldgdevlrgy avkpapggrq svsvlphsvf
      121 drllfsgfaa hvwtrpgvte vqlreraglt qldpshtggv svvlgagnif aiapldvlye
      181 lfahnrtvil klnpitddll svyqdifepf laaglvaivt ggadvgsalt shpditsvhm
      241 tgseqtfnai vwgsgaegea nrrlgerqvd kpvtaelggv spvivvpgqw skadlkfqan
      301 hvatmrlhng gfnciagqvv ivssdwaqkd eflaevrtal adapkrpgwy pgsdgrvsda
      361 cttydqaeav agqrtlvtgl slddvepals teyfapvlgv aeiegegevf lahaidasne
      421 hlhgtlgani imdpktkkai gpslealvar lrygtigvna wtalgflspr atwgafpght
      481 pedvqsgigv vhnalllddv ertvvsgpfr plprslmgge lsispkppwf vnnttaatta
      541 rrltafaakp qwrkfpaifa salrg
//
LOCUS       WP_235244892             129 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF7010 family protein [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235244892
VERSION     WP_235244892.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046369.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22765.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..129
                     /product="DUF7010 family protein"
                     /calculated_mol_wt=13646
ORIGIN      
        1 mgieeyqhvl geatghgwgf laacgatwfa csaawrhwgp kvgayctlfq gmvalplall
       61 ltastpgpdr pvmagmegvs vllasgqllg lpiviyltir tfgcyvvgsl pcagqrsksq
      121 qdkifeqhh
//
LOCUS       WP_235244932             262 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235244932
VERSION     WP_235244932.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 262)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 262)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..262
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=28316
     Region          <8..243
                     /region_name="ARO8"
                     /note="DNA-binding transcriptional regulator, MocR family,
                     contains an aminotransferase domain [Transcription, Amino
                     acid transport and metabolism]; COG1167"
                     /db_xref="CDD:440781"
ORIGIN      
        1 mndsgqewda egmaallrlt garsaylvpd fqnptgilmd daqrervgaa lrrarvvpii
       61 despvelslq eramplplaa yvpdsitvgs vskvywcglr igwmrlpksr iasmaqvrlr
      121 ldlgapvleq laavelmarh kesreyrrlr entsmealla gihrelpdwk varpagggsl
      181 wcelsdarst alvsaarkyg vvlasgptfa pggglddwlr lpfvlseevl agvparlaqa
      241 wadttagqpr vgwgqtaapi ia
//
LOCUS       WP_235244966             250 aa            linear   BCT 02-MAR-2025
DEFINITION  MauE/DoxX family redox-associated membrane protein
            [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235244966
VERSION     WP_235244966.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 250)
  AUTHORS   van der Palen,C.J., Reijnders,W.N., de Vries,S., Duine,J.A. and van
            Spanning,R.J.
  TITLE     MauE and MauD proteins are essential in methylamine metabolism of
            Paracoccus denitrificans
  JOURNAL   Antonie Van Leeuwenhoek 72 (3), 219-228 (1997)
   PUBMED   9403107
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018942.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07291.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..250
                     /product="MauE/DoxX family redox-associated membrane
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0030416 - methylamine metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=26172
ORIGIN      
        1 mfsisllaat vivavillis gvakardphp lrawadmgip kaarkmwlar thaygeiala
       61 vfllalpgal giavavvvll lfvgyfvlia klvadegdtn cncfgslgsg vvdrwtllrn
      121 gvlvalagls itdlalngva aprildqfgw ilalavtalv talvlgafsa apqadpedle
      181 dymrspipyv dligpsldsk ttlrglaqqq avlllmlsph aplvsgspmp fptsrrtcrw
      241 spsgssqppt
//
LOCUS       WP_235244286              92 aa            linear   BCT 02-MAR-2025
DEFINITION  hemolysin III family protein [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235244286
VERSION     WP_235244286.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 92)
  AUTHORS   Pei,J., Millay,D.P., Olson,E.N. and Grishin,N.V.
  TITLE     CREST--a large and diverse superfamily of putative transmembrane
            hydrolases
  JOURNAL   Biol Direct 6, 37 (2011)
   PUBMED   21733186
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 92)
  AUTHORS   Thomas,P., Pang,Y., Dong,J., Groenen,P., Kelder,J., de Vlieg,J.,
            Zhu,Y. and Tubbs,C.
  TITLE     Steroid and G protein binding characteristics of the seatrout and
            human progestin membrane receptor alpha subtypes and their
            evolutionary origins
  JOURNAL   Endocrinology 148 (2), 705-718 (2007)
   PUBMED   17082257
REFERENCE   3  (residues 1 to 92)
  AUTHORS   Tang,Y.T., Hu,T., Arterburn,M., Boyle,B., Bright,J.M., Emtage,P.C.
            and Funk,W.D.
  TITLE     PAQR proteins: a novel membrane receptor family defined by an
            ancient 7-transmembrane pass motif
  JOURNAL   J Mol Evol 61 (3), 372-380 (2005)
   PUBMED   16044242
REFERENCE   4  (residues 1 to 92)
  AUTHORS   Karpichev,I.V., Cornivelli,L. and Small,G.M.
  TITLE     Multiple regulatory roles of a novel Saccharomyces cerevisiae
            protein, encoded by YOL002c, in lipid and phosphate metabolism
  JOURNAL   J Biol Chem 277 (22), 19609-19617 (2002)
   PUBMED   11916977
REFERENCE   5  (residues 1 to 92)
  AUTHORS   Baida,G.E. and Kuzmin,N.P.
  TITLE     Cloning and primary structure of a new hemolysin gene from Bacillus
            cereus
  JOURNAL   Biochim Biophys Acta 1264 (2), 151-154 (1995)
   PUBMED   7495855
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014997.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03006.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..92
                     /product="hemolysin III family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=9765
     Region          15..>92
                     /region_name="HlyIII"
                     /note="Haemolysin-III related; cl03831"
                     /db_xref="CDD:470885"
ORIGIN      
        1 mtatsrdhsv hvtderinti shlvgacfav lgaallisqa aadgdpwkiv gvsiysasli
       61 ilfvcstlhh gldrgplvnd ilrtldytsv ff
//
LOCUS       WP_235244974             366 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2867 domain-containing protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235244974
VERSION     WP_235244974.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022517.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11066.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..366
                     /product="DUF2867 domain-containing protein"
                     /calculated_mol_wt=38841
     Region          <3..176
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Region          204..351
                     /region_name="DUF2867"
                     /note="Protein of unknown function (DUF2867); pfam11066"
                     /db_xref="CDD:431633"
ORIGIN      
        1 mgsrkevedi llgsgvptav lraavilgag sasfemlrhl terlpvmiap rwlstniqpi
       61 aiddiirylv gsgdlppevn rgfdvgadev ltyhqmilry asrsnlvkrr vrtvpvmtpg
      121 lashwvglvt pvpssiakpl vgslihevic kehdiaeyip dpdggfvgfd aavdaaqegp
      181 qakplrpevd pdhpgrisaa dpdwagatvf tdrhsgtvda svdqiwaeie klggedgwhv
      241 pdilwegrgl ldravggrgh tkqrtpgppa agstidswvv esvtatgsdr elvlrsrmkl
      301 pgqalmilnv sgsengsptl tqtarftpsg lgglgywgal wpahtavfla mhrglaksaa
      361 kaaavs
//
LOCUS       WP_235244980             125 aa            linear   BCT 02-MAR-2025
DEFINITION  TfoX/Sxy family protein [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235244980
VERSION     WP_235244980.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 125)
  AUTHORS   Zulty,J.J. and Barcak,G.J.
  TITLE     Identification of a DNA transformation gene required for com101A+
            expression and supertransformer phenotype in Haemophilus influenzae
  JOURNAL   Proc Natl Acad Sci U S A 92 (8), 3616-3620 (1995)
   PUBMED   7724607
REFERENCE   2  (residues 1 to 125)
  AUTHORS   Williams,P.M., Bannister,L.A. and Redfield,R.J.
  TITLE     The Haemophilus influenzae sxy-1 mutation is in a newly identified
            gene essential for competence
  JOURNAL   J Bacteriol 176 (22), 6789-6794 (1994)
   PUBMED   7961436
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016854.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04993.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..125
                     /product="TfoX/Sxy family protein"
                     /calculated_mol_wt=13769
     Region          1..105
                     /region_name="TfoX_N"
                     /note="TfoX N-terminal domain; cl17592"
                     /db_xref="CDD:473084"
ORIGIN      
        1 maydvdlanr lrhalgdipg taekamfggi sflvcghlvi tastygnllv scpkertqef
       61 lerdgvtrar mgkrtmsegw lavemdvvrs dvdldfwvgq aldfsegfdd vdlgtrpgrm
      121 rdrpt
//
LOCUS       WP_235245010             177 aa            linear   BCT 02-MAR-2025
DEFINITION  ASCH domain-containing protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235245010
VERSION     WP_235245010.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 177)
  AUTHORS   Iyer,L.M., Burroughs,A.M. and Aravind,L.
  TITLE     The ASCH superfamily: novel domains with a fold related to the PUA
            domain and a potential role in RNA metabolism
  JOURNAL   Bioinformatics 22 (3), 257-263 (2006)
   PUBMED   16322048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016178.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04266.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..177
                     /product="ASCH domain-containing protein"
                     /calculated_mol_wt=19398
     Region          <1..52
                     /region_name="Cdd"
                     /note="Cytidine deaminase [Nucleotide transport and
                     metabolism]; COG0295"
                     /db_xref="CDD:440064"
     Region          61..162
                     /region_name="ASCH"
                     /note="Predicted RNA-binding protein, contains PUA-like
                     ASCH domain [General function prediction only]; COG2411"
                     /db_xref="CDD:441966"
ORIGIN      
        1 mvaigdqgrg pvvpcgrcrq vmhdlhpdid vivpthdgvn mlpvrhllpd afihpdayaa
       61 rllrfnkryt esvmsgekss tvrfneplsp gpvtivfedh kdhltvpavv tdietfpfss
      121 ltaqqasqpp qtdmstfrsa lqqhypngip qnanvdvitf rvetghraqs ldagpdl
//
LOCUS       WP_235245046             290 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235245046
VERSION     WP_235245046.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..290
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=29312
     Region          46..156
                     /region_name="PA_subtilisin_like"
                     /note="Protease-associated domain containing
                     subtilisin-like proteases. This group contains various PA
                     domain-containing subtilisin-like proteases including
                     melon cucumisin, Arabidopsis thaliana Ara12, a nodule
                     specific serine protease from Alnus glutinosa ag12;
                     cd02120"
                     /db_xref="CDD:239035"
     Site            120..122
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239035"
     Region          <186..252
                     /region_name="Peptidases_S8_S53"
                     /note="Peptidase domain in the S8 and S53 families;
                     cl10459"
                     /db_xref="CDD:415849"
ORIGIN      
        1 maasthdrga vktvttfdea sdnqegdtye gvgvgdgvdf sdvilsvdaa aegvsaedaa
       61 lclldvdpat dgnqpsldpa lvdgkvvlcd rgviarvdks atvaeaggvg mvlgnvspgq
      121 sldadfhsvp tihvdstvre alvtyvesad aaqvkisaqd dtpvvapema gfssygpata
      181 gggdllkpdi tapgasivaa yhndrtsgdp afnsisgtsm saphiaglaa lmmqqypdws
      241 psavksammt tardvntagd piqrngedas pldfgagevv pallqpwpgl
//
LOCUS       WP_235245062             147 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1003 domain-containing protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235245062
VERSION     WP_235245062.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017970.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06210.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..147
                     /product="DUF1003 domain-containing protein"
                     /calculated_mol_wt=16543
     Region          <22..139
                     /region_name="COG4420"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:443535"
ORIGIN      
        1 mdephscphc ghmlsmftep vpdkgerlaa rvvsvvasww fpiglitait iwgiinllyr
       61 glepypmlpl ailattlgsi aalqgplili tqrrsaqrdr ardretylva srneqelhel
      121 ltemtrlrst lekmkriheg nltlfis
//
LOCUS       WP_235245078             218 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding domain-containing protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235245078
VERSION     WP_235245078.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 218)
  AUTHORS   Mees,A., Klar,T., Gnau,P., Hennecke,U., Eker,A.P., Carell,T. and
            Essen,L.O.
  TITLE     Crystal structure of a photolyase bound to a CPD-like DNA lesion
            after in situ repair
  JOURNAL   Science 306 (5702), 1789-1793 (2004)
   PUBMED   15576622
REFERENCE   2  (residues 1 to 218)
  AUTHORS   Tamada,T., Kitadokoro,K., Higuchi,Y., Inaka,K., Yasui,A., de
            Ruiter,P.E., Eker,A.P. and Miki,K.
  TITLE     Crystal structure of DNA photolyase from Anacystis nidulans
  JOURNAL   Nat Struct Biol 4 (11), 887-891 (1997)
   PUBMED   9360600
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015406.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03441.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..218
                     /product="FAD-binding domain-containing protein"
                     /calculated_mol_wt=25304
     Region          <3..218
                     /region_name="COG3046"
                     /note="Uncharacterized conserved protein related to
                     deoxyribodipyrimidine photolyase [General function
                     prediction only]"
                     /db_xref="CDD:442280"
ORIGIN      
        1 mepgaivera levgesddip lasvegfvrq iigwrefmra tyllwgrqmr tsnrlehars
       61 vdegwwtget glppvdhvik rllssgyahh ierlmvlgna mcllridpde vyewfmemfi
      121 dsydwvmvpn vyamsqfasg eaittkpyvs gsnylkkmsd lppgewraew dglywafvsd
      181 hrevfeanfr srmmtkmwdg mdeakqrehl draakwla
//
LOCUS       WP_235245100             149 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2177 family protein [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235245100
VERSION     WP_235245100.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021462.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09945.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..149
                     /product="DUF2177 family protein"
                     /calculated_mol_wt=16026
     Region          3..134
                     /region_name="DUF2177"
                     /note="Predicted membrane protein (DUF2177); cl02014"
                     /db_xref="CDD:470433"
ORIGIN      
        1 mrtwtiatit savvlgvlda lwitlfagpt yraemgnavr enffivpama fyviyllglt
       61 hfvtmrtlqs stlvavrdaa ffgfvsygty tltgwavlep fnamvalpdl vwggvvstat
      121 vlvarvvikr mapaamqgak asqpsskvr
//
LOCUS       WP_235245117             138 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235245117
VERSION     WP_235245117.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 138)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 138)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..138
                     /product="VOC family protein"
                     /calculated_mol_wt=14456
     Region          9..>82
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mpkitlnnie lpatdldvak qfyedafgws fidygptyaa aqlpgmeigf stdasvaaap
       61 pygaesstgp llllqtadlg aayrtltekk qpsspshssf ragvgftsat raatswafth
      121 spncealsqp iphhpapt
//
LOCUS       WP_235245177             271 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein
            [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235245177
VERSION     WP_235245177.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 271)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..271
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=28730
     Region          47..269
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 msrklilgvs aitaaftlaa cggsdsdsgs daagstaage ygtisdgtlv vategtyrpf
       61 tyheggagdl tgydvdvvte vadrlgleve feetqfdgif agleanrfdv ianqisindq
      121 reesylmsdp ytvspgvvvv aedntditsl adldgkttaq sltsnwftva ddnganveav
      181 egwaqaitll eqgrvdatvn dkltfldyet tnpeagikig aetdeeslna fvftkdkedl
      241 neafnetlvq mqddgtlael gekyfgqdvs q
//
LOCUS       WP_235245218             187 aa            linear   BCT 02-MAR-2025
DEFINITION  universal stress protein [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235245218
VERSION     WP_235245218.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 187)
  AUTHORS   Sousa,M.C. and McKay,D.B.
  TITLE     Structure of the universal stress protein of Haemophilus influenzae
  JOURNAL   Structure 9 (12), 1135-1141 (2001)
   PUBMED   11738040
REFERENCE   2  (residues 1 to 187)
  AUTHORS   Zarembinski,T.I., Hung,L.W., Mueller-Dieckmann,H.J., Kim,K.K.,
            Yokota,H., Kim,R. and Kim,S.H.
  TITLE     Structure-based assignment of the biochemical function of a
            hypothetical protein: a test case of structural genomics
  JOURNAL   Proc Natl Acad Sci U S A 95 (26), 15189-15193 (1998)
   PUBMED   9860944
REFERENCE   3  (residues 1 to 187)
  AUTHORS   Nystrom,T. and Neidhardt,F.C.
  TITLE     Expression and role of the universal stress protein, UspA, of
            Escherichia coli during growth arrest
  JOURNAL   Mol Microbiol 11 (3), 537-544 (1994)
   PUBMED   8152377
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012791.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00582.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..187
                     /product="universal stress protein"
                     /calculated_mol_wt=19255
     Region          10..143
                     /region_name="AANH_superfamily"
                     /note="Adenine nucleotide alpha hydrolase (AANH)
                     superfamily; cl00292"
                     /db_xref="CDD:469708"
ORIGIN      
        1 mssqthsrqv vvgydassps eaalkwaara akkrdlpllv lhaaeriqyt qdegsgvwdk
       61 sraladakdv atggaervta sfpdvevkta gslftakval gevstnssmm vlgtngrgka
      121 gsfllgstay aiagyarcpv vivqdgsnel pgpdrpivvg angtpgsera ietaidaahe
      181 wgspsrs
//
LOCUS       WP_235245229              89 aa            linear   BCT 02-MAR-2025
DEFINITION  topoisomerase C-terminal repeat-containing protein
            [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235245229
VERSION     WP_235245229.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024761.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13368.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..89
                     /product="topoisomerase C-terminal repeat-containing
                     protein"
                     /calculated_mol_wt=9397
     Region          <2..36
                     /region_name="COG1754"
                     /note="Uncharacterized C-terminal domain of topoisomerase
                     IA [Function unknown]"
                     /db_xref="CDD:441360"
ORIGIN      
        1 mtdgetnatl rkdddvetit aergfellae krakgpttrk kaakkttkka mtkkaatkkt
       61 aakkttakas aakktttkta trktaakka
//
LOCUS       WP_235245236             328 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235245236
VERSION     WP_235245236.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 328)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..328
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=33955
     Region          115..>302
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 mratskvkgr sgrfvaatam vgaltvlaac tdegevtsae gtsesssqsa apseltsavp
       61 egletfydqs lawdecdgge catlevpidy qapedgsiel allrvaaggd kqgslvvnpg
      121 gpggsgveya qaaplafstd vrevydvvgf dprgvarsap imcfddeqmd dfygsdpspd
      181 daaeeaeada lneefveace aaapellghv stveaardmd vlraalgeed ldylgasygt
      241 ylgatyaslf penvgqfvld galdptlsdq evslgqaggf eestrayvqd cidsgdcplg
      301 ddvdagmqnl vdflaevden psrslata
//
LOCUS       WP_235245333             107 aa            linear   BCT 02-MAR-2025
DEFINITION  SAF domain-containing protein [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235245333
VERSION     WP_235245333.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 107)
  AUTHORS   Iyer,L.M. and Aravind,L.
  TITLE     The emergence of catalytic and structural diversity within the
            beta-clip fold
  JOURNAL   Proteins 55 (4), 977-991 (2004)
   PUBMED   15146494
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020250.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08666.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..107
                     /product="SAF domain-containing protein"
                     /calculated_mol_wt=11079
     Region          <64..>104
                     /region_name="FlgA"
                     /note="Flagellar basal body P-ring formation protein FlgA
                     [Cell motility]; COG1261"
                     /db_xref="CDD:440873"
ORIGIN      
        1 mserafrstl prskprffha rlarrclaaa cvaiaawlaf stldsaaveg atsvvvvaan
       61 vpagtalsed dlivearpid nqptgamvdp ndaigsttsh psraakf
//
LOCUS       WP_235245378             222 aa            linear   BCT 02-MAR-2025
DEFINITION  M14 family zinc carboxypeptidase [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235245378
VERSION     WP_235245378.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012471.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00246.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..222
                     /product="M14 family zinc carboxypeptidase"
                     /GO_function="GO:0004181 - metallocarboxypeptidase
                     activity [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=23315
     Region          56..>203
                     /region_name="MpaA"
                     /note="Murein tripeptide amidase MpaA [Cell
                     wall/membrane/envelope biogenesis]; COG2866"
                     /db_xref="CDD:442113"
ORIGIN      
        1 mgsrrampfa lalglavtsa gmsatasavp vtssiatqne nlsldaagai glvesaeine
       61 rllalasnnd rvsteiiges vegrdlllvt vtdpaadddl pvvlftanlh gdewegsdaa
      121 lqliedlats tdeaevawle strvsfvvta npdgrfnntr enaagidlnr dfmtasqpet
      181 qalrdvvieq qplalvdlhg yvngtlvept tphtaktpns iy
//
LOCUS       WP_235245384             114 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235245384
VERSION     WP_235245384.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 114)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 114)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..114
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=11430
     Region          2..>89
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
ORIGIN      
        1 mgadsasttv gatvatgiaa mtgrpvdlvn asrsgatsea lpaqvemgla dmhqpdvaii
       61 mvgandvker ldladsirhl stavhalqal esksssapaq twarsgqcls rcag
//
LOCUS       WP_235245385             740 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235245385
VERSION     WP_235245385.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 740)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..740
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=77817
     Region          50..293
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     Region          334..>673
                     /region_name="PRK09274"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:236443"
ORIGIN      
        1 mnladlpgid pdwsvqvsvp srspqgrshl whvldnlasv qasghdvigt ilcvhgnptw
       61 sylwrrvvdq appgwrvvav dqlsmgwser ldeprtmaqr iddlgdltka meitgpvitl
      121 ahdwggpisl gwaidhpeql qatiltntav hqpadqpkpi aitttrskpl ihtlcartpa
      181 fvrattalcl pplgkplrda faspyasvar rqpvadfvad ipfetdhpsf ptlervaegv
      241 kqlavpalfv wgmsdpvfsp ryltdlqrrm phadvqtypk ashlvledkp egvgviwqwi
      301 tdhfgdaqnp ardeaparpa qgellpievd atepdelaiv elasaagqit rgalaqrvad
      361 vagaldargv kpgqrvavlv ppgidlttia yavwrlgavv vvadaglglp rlgaalrgas
      421 pdhvigirka laltsatrvp gkriaadpdd vqaliadsvs lpdleaanis pdadaallft
      481 sgatgppkav aytrtqlsaq irqlrdtfgl hrgerfvaaf apfalygpal gltsavpnmd
      541 vtaphtltaq algeavaaid atvvfaspaa lrnvvattse ltpsaaaalt gprlvlsaga
      601 pvptelllav kdlltnaeth tpygmtealp iatidpttqi tdasdgggvc vgtplegvei
      661 aispltnlpr pwstplvssa tlsfarhtsr sattdcgpcn vsrpslqvgt alamldtstp
      721 ragcgskvap smcwrppkap
//
LOCUS       WP_235245048             162 aa            linear   BCT 02-MAR-2025
DEFINITION  protease inhibitor I9 family protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235245048
VERSION     WP_235245048.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 162)
  AUTHORS   Kojima,S., Minagawa,T. and Miura,K.
  TITLE     The propeptide of subtilisin BPN' as a temporary inhibitor and
            effect of an amino acid replacement on its inhibitory activity
  JOURNAL   FEBS Lett 411 (1), 128-132 (1997)
   PUBMED   9247157
REFERENCE   2  (residues 1 to 162)
  AUTHORS   Li,Y., Hu,Z., Jordan,F. and Inouye,M.
  TITLE     Functional analysis of the propeptide of subtilisin E as an
            intramolecular chaperone for protein folding. Refolding and
            inhibitory abilities of propeptide mutants
  JOURNAL   J Biol Chem 270 (42), 25127-25132 (1995)
   PUBMED   7559646
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017709.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05922.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..162
                     /product="protease inhibitor I9 family protein"
                     /calculated_mol_wt=17205
     Region          49..149
                     /region_name="Inhibitor_I9"
                     /note="Peptidase inhibitor I9; pfam05922"
                     /db_xref="CDD:428674"
ORIGIN      
        1 msptprgarr raiavtaaat mvvaplalst sataqdsdvq leeqneagry ivqlksdpis
       61 aytggiqsip atkpgvgqkv dvetsaadry adfltderqs vlseadinde avsytydvai
      121 ngfsadltae qvaalrksds vvnifpneta trtpwerpit wg
//
LOCUS       WP_235245398              91 aa            linear   BCT 02-MAR-2025
DEFINITION  S24 family peptidase [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235245398
VERSION     WP_235245398.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 91)
  AUTHORS   Bell,C.E., Frescura,P., Hochschild,A. and Lewis,M.
  TITLE     Crystal structure of the lambda repressor C-terminal domain
            provides a model for cooperative operator binding
  JOURNAL   Cell 101 (7), 801-811 (2000)
   PUBMED   10892750
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012920.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00717.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..91
                     /product="S24 family peptidase"
                     /calculated_mol_wt=9773
     Region          1..81
                     /region_name="Peptidase_S24_S26"
                     /note="The S24, S26 LexA/signal peptidase superfamily
                     contains LexA-related and type I signal peptidase
                     families. The S24 LexA protein domains include: the lambda
                     repressor CI/C2 family and related bacterial prophage
                     repressor proteins; LexA (EC 3.4.21.88), the...; cl10465"
                     /db_xref="CDD:447902"
ORIGIN      
        1 mlptyaegdr llvrygatvs pgdvviaqlp hapsgkrplg vkrlarwewg kawlasdnpe
       61 qgtdssvfga llpeniigkv vlrlprkkse a
//
LOCUS       WP_235245428             445 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235245428
VERSION     WP_235245428.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019581.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07969.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..445
                     /product="amidohydrolase family protein"
                     /calculated_mol_wt=47428
     Region          30..440
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
     Site            order(69,71,327,352,414)
                     /site_type="active"
                     /db_xref="CDD:238617"
ORIGIN      
        1 mtdlllrqak lvplgaprdv rapkadepqd ilirdgqiaq vgqsleptpe sfivdaegrw
       61 ampglwdqhv hmtrwslsln rldtsgvssp qdtldlvqaa iargeantpt gfltgwghrs
      121 aqwerqpnva eldavtgsvp vvlisgdghh gwlntaalqr lgiplrdgii eedewfdvya
      181 lldglpgatt eaeagvqlav dvarragvvg ivdlefsgsw eqwplrfaag cgplrvrtgv
      241 yagrfpeila tgrragdvip gsdgwatqgp lklisdgsln trtawccspy agaehlaypl
      301 grpnfskeqm ldlvaqahqa glhtalhaig daavaaaldv fattgatgsi ehaqllqlad
      361 lprwaklpvt asvqpahlld drsvteqcwp drtdrtfmvr glldqgikva lgsdapvaal
      421 dpwlamssav hrgepgappg iqskp
//
LOCUS       WP_235245462             200 aa            linear   BCT 02-MAR-2025
DEFINITION  HAD family hydrolase [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235245462
VERSION     WP_235245462.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 200)
  AUTHORS   Osman,C., Haag,M., Wieland,F.T., Brugger,B. and Langer,T.
  TITLE     A mitochondrial phosphatase required for cardiolipin biosynthesis:
            the PGP phosphatase Gep4
  JOURNAL   EMBO J 29 (12), 1976-1987 (2010)
   PUBMED   20485265
REFERENCE   2  (residues 1 to 200)
  AUTHORS   Hisano,T., Hata,Y., Fujii,T., Liu,J.Q., Kurihara,T., Esaki,N. and
            Soda,K.
  TITLE     Crystal structure of L-2-haloacid dehalogenase from Pseudomonas sp.
            YL. An alpha/beta hydrolase structure that is different from the
            alpha/beta hydrolase fold
  JOURNAL   J Biol Chem 271 (34), 20322-20330 (1996)
   PUBMED   8702766
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012905.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00702.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..200
                     /product="HAD family hydrolase"
                     /calculated_mol_wt=20685
     Region          <1..167
                     /region_name="ZntA"
                     /note="Cation-transporting P-type ATPase [Inorganic ion
                     transport and metabolism]; COG2217"
                     /db_xref="CDD:441819"
ORIGIN      
        1 maaaiesssr hplaaaicaa adhlpaardi teeagfgmrg qvgehlvrvg sirwiepghl
       61 igearamasa gmtvvvveat arsldwsgca ttcglkqrrl lrllsragia tlmltgdnar
      121 tahalahaag iddvraeqlp adkaaviael kmagpvamvg dgindaprwp pplsvslsrq
      181 avlprpsnpq ispllvmtca
//
LOCUS       WP_235245481             310 aa            linear   BCT 02-MAR-2025
DEFINITION  GTPase [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235245481
VERSION     WP_235245481.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 310)
  AUTHORS   Shields,M.J., Fischer,J.J. and Wieden,H.J.
  TITLE     Toward understanding the function of the universally conserved
            GTPase HflX from Escherichia coli: a kinetic approach
  JOURNAL   Biochemistry 48 (45), 10793-10802 (2009)
   PUBMED   19824612
REFERENCE   2  (residues 1 to 310)
  AUTHORS   Dutta,D., Bandyopadhyay,K., Datta,A.B., Sardesai,A.A. and
            Parrack,P.
  TITLE     Properties of HflX, an enigmatic protein from Escherichia coli
  JOURNAL   J Bacteriol 191 (7), 2307-2314 (2009)
   PUBMED   19181811
REFERENCE   3  (residues 1 to 310)
  AUTHORS   Jain,N., Dhimole,N., Khan,A.R., De,D., Tomar,S.K., Sajish,M.,
            Dutta,D., Parrack,P. and Prakash,B.
  TITLE     E. coli HflX interacts with 50S ribosomal subunits in presence of
            nucleotides
  JOURNAL   Biochem Biophys Res Commun 379 (2), 201-205 (2009)
   PUBMED   19109926
REFERENCE   4  (residues 1 to 310)
  AUTHORS   Bassler,J., Kallas,M. and Hurt,E.
  TITLE     The NUG1 GTPase reveals and N-terminal RNA-binding domain that is
            essential for association with 60 S pre-ribosomal particles
  JOURNAL   J Biol Chem 281 (34), 24737-24744 (2006)
   PUBMED   16803892
REFERENCE   5  (residues 1 to 310)
  AUTHORS   Vernet,C., Ribouchon,M.T., Chimini,G. and Pontarotti,P.
  TITLE     Structure and evolution of a member of a new subfamily of
            GTP-binding proteins mapping to the human MHC class I region
  JOURNAL   Mamm Genome 5 (2), 100-105 (1994)
   PUBMED   8180467
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014036.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01926.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..310
                     /product="GTPase"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
                     /calculated_mol_wt=33066
     Region          <18..>96
                     /region_name="YlqF_related_GTPase"
                     /note="Circularly permuted YlqF-related GTPases; cl49605"
                     /db_xref="CDD:483945"
     Site            36..38
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206746"
     Region          62..200
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            64..71
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            64..71
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206746"
     Site            89..96
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206746"
     Site            92
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            92
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206746"
     Site            96..98
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            136..139
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(138..139,159..160)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Region          191..>251
                     /region_name="SelB"
                     /note="Selenocysteine-specific translation elongation
                     factor SelB [Translation, ribosomal structure and
                     biogenesis]; COG3276"
                     /db_xref="CDD:442507"
     Site            195..198
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
ORIGIN      
        1 msprrstgsr sesltwradq lqeaietgga elisdaaiag qrvvakvrer walkggrtvv
       61 slagatgsgk stlfnqlvgh tvadisarrp ttsrataaiw gdedatdlln wlgvnqrhhl
      121 sadgdqsdld glvlidlpdf dsrelanrve adrvlersdv fvwvtdpqky adarlhedyl
      181 salkehetvm mvvlnqidrv seeggvegik ddlkalvaad gagdftiygt sarmglgvsd
      241 vrqaigsvva ernaaenrlv gdlrtsatsm lsmvgeteia ssdvvsddll talkqaagvp
      301 vvldavqrnt
//
LOCUS       WP_235245517             137 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding oxidoreductase [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235245517
VERSION     WP_235245517.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 137)
  AUTHORS   Lu,G., Campbell,W.H., Schneider,G. and Lindqvist,Y.
  TITLE     Crystal structure of the FAD-containing fragment of corn nitrate
            reductase at 2.5 A resolution: relationship to other flavoprotein
            reductases
  JOURNAL   Structure 2 (9), 809-821 (1994)
   PUBMED   7812715
REFERENCE   2  (residues 1 to 137)
  AUTHORS   Hyde,G.E., Crawford,N.M. and Campbell,W.H.
  TITLE     The sequence of squash NADH:nitrate reductase and its relationship
            to the sequences of other flavoprotein oxidoreductases. A family of
            flavoprotein pyridine nucleotide cytochrome reductases
  JOURNAL   J Biol Chem 266 (35), 23542-23547 (1991)
   PUBMED   1748631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013161.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00970.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..137
                     /product="FAD-binding oxidoreductase"
                     /calculated_mol_wt=14679
     Region          37..>137
                     /region_name="FNR_like"
                     /note="Ferredoxin reductase (FNR), an FAD and NAD(P)
                     binding protein, was intially identified as a chloroplast
                     reductase activity, catalyzing the electron transfer from
                     reduced iron-sulfur protein ferredoxin to NADP+ as the
                     final step in the electron transport...; cl06868"
                     /db_xref="CDD:447143"
     Site            order(67,81..84,98..100,105..108)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99811"
     Site            order(81,83..84)
                     /site_type="other"
                     /note="conserved FAD binding motif [chemical binding]"
                     /db_xref="CDD:99811"
     Site            order(105,108,111,118)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99811"
ORIGIN      
        1 msaitnsqhg aisvaaatpq lrllpgaega fdqvmlckav ialtpdvstf vlepltpqnf
       61 tfepgqyvvl tveidgeqhe rcytissppt rphlltitvk rvpngvvsnw lhdsfgvgqq
      121 alvrgplgef swstiqp
//
LOCUS       WP_235245525             276 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein
            [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235245525
VERSION     WP_235245525.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..276
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=29372
     Region          20..>229
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
ORIGIN      
        1 mkdfpprvta fegsgdnepd thsawrylrw vlrdqwglvv lasafsmlwi lpsaltpwiv
       61 ghaiddgiag gettalvgwv glllaitlva aitgamghti vvrawlvaly gtallvarkg
      121 lqlghvlprr tptgevlsva esdgnqfgaf veitarvign lfayaivaai vlstslrlgl
      181 imllvtpllv ittaplmrpl traqgkersr dseltsqatd ivaglrvlrg saekppsatt
      241 mpgnlsgfgw lgcgqasgra wsmpsafcsp asfwwr
//
LOCUS       WP_235245665             178 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme
            [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235245665
VERSION     WP_235245665.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..178
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /calculated_mol_wt=19309
     Region          <12..169
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
ORIGIN      
        1 mqaastdlwh elqpaklaps pnsvperfem gtlpyellag vraavdflag lepngqgerr
       61 erletsmavl heherqiaqa lieavesvpg vtnysraser tpsvfftvee lsaseissrl
      121 aqaninapas hfyaleacrr lglgeagair vsaapystle evarfrealh aavqqlrd
//
LOCUS       WP_235245680             224 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: helix-turn-helix domain-containing protein
            [Fusobacterium].
ACCESSION   WP_235245680
VERSION     WP_235245680.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium
  ORGANISM  Fusobacterium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025107.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13730.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Fusobacterium"
                     /db_xref="taxon:848"
     Protein         1..224
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=25850
     Region          17..71
                     /region_name="HTH_36"
                     /note="Helix-turn-helix domain; pfam13730"
                     /db_xref="CDD:463970"
ORIGIN      
        1 mkkngffiie rfmvddlklk gneliiygii ygfsknnssf egslnylagw igsskqtvit
       61 vikslmnkgl iqrvginksm rtyiyraldn qsniltdesq kniacqskdf teigqniipn
      121 nidnninnki ddtlykdtik eilkdwniny mtivrfkkpi qrvkdvvafa ksnnkgegwi
      181 vsairddyrl ynieknfkki geetykdsei pddnielykh mgfi
//
LOCUS       WP_235245686             257 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Fusobacterium perfoetens].
ACCESSION   WP_235245686
VERSION     WP_235245686.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 257)
  AUTHORS   Yeo,C.C. and Poh,C.L.
  TITLE     Characterization of IS1474, an insertion sequence of the IS21
            family isolated from Pseudomonas alcaligenes NCIB 9867
  JOURNAL   FEMS Microbiol Lett 149 (2), 257-263 (1997)
   PUBMED   9141667
REFERENCE   2  (residues 1 to 257)
  AUTHORS   Solinas,F., Marconi,A.M., Ruzzi,M. and Zennaro,E.
  TITLE     Characterization and sequence of a novel insertion sequence,
            IS1162, from Pseudomonas fluorescens
  JOURNAL   Gene 155 (1), 77-82 (1995)
   PUBMED   7698671
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01695.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..257
                     /product="ATP-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=29563
     Region          6..244
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            117..124
                     /site_type="other"
                     /note="Walker A motif"
                     /db_xref="CDD:99707"
     Site            order(118..125,177,210)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:99707"
     Site            173..178
                     /site_type="other"
                     /note="Walker B motif"
                     /db_xref="CDD:99707"
     Site            224
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:99707"
ORIGIN      
        1 mknipicryc gkpykknphi leglpdfike kiiyipdcdc leiqkekele elekkrveec
       61 kanrikrfrd islidekfrl stferadmsq nyikiarafa ekfiekgnap rgilfyggvg
      121 tgktyassci gnylmdsgkt vvimnmglyi gkiqrewaea ekdllsyikd sdlliiddfg
      181 aekisefvie ktfamidtry ralkpliitt nlnieeiger fgariadris emcfpilvtg
      241 mskrgadtkr kfmeflk
//
LOCUS       WP_235245731             176 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235245731
VERSION     WP_235245731.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..176
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=18344
     Region          27..>165
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 msdvstrsit wgaaglitlf aieyiavgta mpsvardldg lalyslafga tvatsvvgmm
       61 vsgwwsdhsg pkpvlltgcl sfagglllag laptmelfvv grglqgwgsg latvsiyvii
      121 aqgvpderrp alfsmlaaaw vipglagpvl tgvvveqwgw rwvfwesshw csslss
//
LOCUS       WP_235245740              69 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6703 family protein [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235245740
VERSION     WP_235245740.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042772.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20444.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..69
                     /product="DUF6703 family protein"
                     /calculated_mol_wt=7059
     Region          <7..60
                     /region_name="DUF6703"
                     /note="Family of unknown function (DUF6703); pfam20444"
                     /db_xref="CDD:466593"
ORIGIN      
        1 mgvvvllvig glvggaagtv ivalpvifaa wllylawptl glaeramrts vwvaliavav
       61 viafprdif
//
LOCUS       WP_235245750             141 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-dependent oxidoreductase [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235245750
VERSION     WP_235245750.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   van Der Ploeg,J.R., Iwanicka-Nowicka,R., Bykowski,T.,
            Hryniewicz,M.M. and Leisinger,T.
  TITLE     The Escherichia coli ssuEADCB gene cluster is required for the
            utilization of sulfur from aliphatic sulfonates and is regulated by
            the transcriptional activator Cbl
  JOURNAL   J Biol Chem 274 (41), 29358-29365 (1999)
   PUBMED   10506196
REFERENCE   2  (residues 1 to 141)
  AUTHORS   Kertesz,M.A., Schmidt-Larbig,K. and Wuest,T.
  TITLE     A novel reduced flavin mononucleotide-dependent methanesulfonate
            sulfonatase encoded by the sulfur-regulated msu operon of
            Pseudomonas aeruginosa
  JOURNAL   J Bacteriol 181 (5), 1464-1473 (1999)
   PUBMED   10049377
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015325.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03358.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..141
                     /product="NAD(P)H-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=14703
     Region          5..>124
                     /region_name="FMN_red"
                     /note="NADPH-dependent FMN reductase; cl00438"
                     /db_xref="CDD:469770"
ORIGIN      
        1 msyrivvvsa glnipsstgi ladqiaasve lqmrradepv eftrielrel gkdimsamls
       61 ggmkssallt aeralaaada vvavtpvfsa sysglfksff dvlemgtmrg kpvalgatag
      121 tarhpsswtp lcdhclptsa l
//
LOCUS       WP_235245757             658 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ATP-binding protein [Fusobacterium].
ACCESSION   WP_235245757
VERSION     WP_235245757.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium
  ORGANISM  Fusobacterium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae.
REFERENCE   1  (residues 1 to 658)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 658)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 658)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 658)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Fusobacterium"
                     /db_xref="taxon:848"
     Protein         1..658
                     /product="ATP-binding protein"
                     /calculated_mol_wt=76190
     Region          26..240
                     /region_name="HisJ"
                     /note="ABC-type amino acid transport/signal transduction
                     system, periplasmic component/domain [Amino acid transport
                     and metabolism, Signal transduction mechanisms]; COG0834"
                     /db_xref="CDD:440596"
     Region          304..655
                     /region_name="NtrB"
                     /note="Signal transduction histidine kinase NtrB, nitrogen
                     specific [Signal transduction mechanisms]; COG3852"
                     /db_xref="CDD:443061"
ORIGIN      
        1 minsfisqgi siertpkkiv lkkeyvvafd pmepplqfve egvikgfnie llnligqknn
       61 vkfiyvpmtk kesyeklvnk kidavigmrf dkeyenkiry tdsigeysvc ivapktkiks
      121 ikegfgnedf lvgvekgsse ynylknmkkv nfnivfdqes lfkllelera dfaigvqeia
      181 eyimleknly nkyeimnsyt apvsyyigvs yeneslvkvi ngelknlkin gsyenlfvkw
      241 nksaelekek qmlqniktis yvslilvlil lvisiwniql kkvvkdktak lrkinkelee
      301 kiieirnnne lnsiicessp rcitifdrdr kitfmnknsi nlfnagdnfk gkdayyypim
      361 ekiigngvfe ktvfeneahi trelkinlng reeyfrytly plldyqknni gafltmeect
      421 kekllreksl kkekdtaiat iiagiaheir npmtaiktyi ellplkkdne kfreqivtiv
      481 pkevervnrl ienlidyikp kansisdinl ydiinssmll lkptfdknsi kieldidttl
      541 sikgdpaqik qvminillns idainekkek idekeeyfik iksyafeehr iieitdngig
      601 mtekelnniy evfyttkakg tglglpltkq lveknsgnlf veseknkftk ftiifevi
//
LOCUS       WP_235245792              65 aa            linear   BCT 02-MAR-2025
DEFINITION  biotin/lipoyl-containing protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235245792
VERSION     WP_235245792.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012584.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00364.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..65
                     /product="biotin/lipoyl-containing protein"
                     /calculated_mol_wt=6872
     Region          <6..58
                     /region_name="Biotinyl_lipoyl_domains"
                     /note="Biotinyl_lipoyl_domains are present in
                     biotin-dependent carboxylases/decarboxylases, the
                     dihydrolipoyl acyltransferase component (E2) of 2-oxo acid
                     dehydrogenases, and the H-protein of the glycine cleavage
                     system (GCS). These domains transport CO2, acyl; cl11404"
                     /db_xref="CDD:448245"
     Site            25
                     /site_type="other"
                     /note="lipoyl-biotinyl attachment site [posttranslational
                     modification]"
                     /db_xref="CDD:133456"
ORIGIN      
        1 mlqhvvavgd tvapgdvigr iegrrdvhev kalhpghvte wlaepgdpva pgqpllrlhp
       61 tedse
//
LOCUS       WP_235245892             196 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235245892
VERSION     WP_235245892.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024635.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13238.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..196
                     /product="AAA family ATPase"
                     /calculated_mol_wt=21774
     Region          29..179
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Site            order(38,43..46)
                     /site_type="active"
                     /db_xref="CDD:238977"
ORIGIN      
        1 mkahrwltqd dpavithlra aisphlslgr pvlvgidgrs gtgkttlard lrrelscapg
       61 strvihmdgl ypgwqglaas veivrrdila plhrgesaty rlwdwhhdkp gllttvkpqq
      121 viivegvgsi taspddydlr vwieapenvr rrralardga mfephwdrwa aqeatyfatn
      181 twavpahfgi hgadde
//
LOCUS       WP_235245862             232 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235245862
VERSION     WP_235245862.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..232
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=25695
     Region          21..197
                     /region_name="NUDIX_ADPRase_Rv1700"
                     /note="ADP-ribose pyrophosphatase from Mycobacterium
                     tuberculosis (Mt-ADPRase), and similar proteins; cd24158"
                     /db_xref="CDD:467606"
ORIGIN      
        1 mtlnvpladr aelvdeltsk tvlesavvyq grvwdvvser vdlgdagevt rdfvdhpgav
       61 ailvlredrg qpeilllqqy rhpvranewe lpaglldveg eepvvgaare laeeadlraq
      121 rwdllaeevs spggvsealr iflardltdi paderfertd eeadlvlrwv alddaveavm
      181 agklrnattm igvlsaaram etgwqslrdp repwlshprr rltdstttkn kg
//
LOCUS       WP_235245897              91 aa            linear   BCT 02-MAR-2025
DEFINITION  Trp biosynthesis-associated membrane protein [Ornithinimicrobium
            sp. INDO-MA30-4].
ACCESSION   WP_235245897
VERSION     WP_235245897.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021079.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09534.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..91
                     /product="Trp biosynthesis-associated membrane protein"
                     /calculated_mol_wt=8857
     Region          6..>90
                     /region_name="Trp_oprn_chp"
                     /note="Tryptophan-associated transmembrane protein
                     (Trp_oprn_chp); cl17850"
                     /db_xref="CDD:450202"
ORIGIN      
        1 mrnlslllav lggvvslyls gqvwvaglai dpvlgaqriq vsgadatpas alslvilagl
       61 asglltsgwg hrvavaiaal aglgvagsaw w
//
LOCUS       WP_235245922             159 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235245922
VERSION     WP_235245922.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 159)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024110.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12698.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..159
                     /product="ABC transporter permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=16005
     Region          3..133
                     /region_name="YadH"
                     /note="ABC-type multidrug transport system, permease
                     component [Defense mechanisms]; COG0842"
                     /db_xref="CDD:440604"
ORIGIN      
        1 mgttplgrgg limakagavl mvvtlqvvvi sgaafvlgwr pdltgvppal lflvlgsgcf
       61 valavaigga lraeavlala nllwvvllag ggiliptdal pasiaaivew lpsalladgl
      121 rsalttgqag ipmslallal tlwtlllalv arrllrwsd
//
LOCUS       WP_235246075             431 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6884 domain-containing protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235246075
VERSION     WP_235246075.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF045163.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21818.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..431
                     /product="DUF6884 domain-containing protein"
                     /calculated_mol_wt=46662
ORIGIN      
        1 mesisfting hgyvlsaadv klrlaqetpd riyqywvkai gqrwpvkqaf slaigvsasd
       61 ftsqtarrhl gslgfplgkg aqsiaapgkp kpvpkaarls ahqvhaasra dvvliscvks
      121 kraegaqakd lyvssyfskm rtyaestglp wfilsaehgl vrpdewvepy ekylpetssk
      181 yqtawgqkvv rqlesavgpv tgvtfdlhag anyvdsvgas letagasvvd qlhglslgrr
      241 lawynertgg ldssvetmia qlrdqelams vpdfiaarga vfrsagmynf wvdragardl
      301 saglgypiep gliyaglaga trtggstskn tlwsriatmh lgkthrlstl rlslgsilsq
      361 thdwpaideg qvtswmkthl rvvalpvada dtlgdletki lieldpplnl akvgsndirl
      421 rlsslrklya q
//
LOCUS       WP_235245955             829 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Fusobacterium perfoetens].
ACCESSION   WP_235245955
VERSION     WP_235245955.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 829)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..829
                     /product="AMP-binding protein"
                     /calculated_mol_wt=93906
     Region          14..508
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(146,149..154,156..157)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(149,295..296,316..321,389,400,403,415,502)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(149,189..190,239,241..242,245,295..296,316..321,389,
                     400,403,412..415,482)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(189,241..242,245,295,412..414,473,482)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Region          537..605
                     /region_name="AcpP"
                     /note="Acyl carrier protein [Lipid transport and
                     metabolism]; COG0236"
                     /db_xref="CDD:440006"
     Region          628..814
                     /region_name="PlsC"
                     /note="1-acyl-sn-glycerol-3-phosphate acyltransferase
                     [Lipid transport and metabolism]; COG0204"
                     /db_xref="CDD:439974"
ORIGIN      
        1 maikfvtdfn keavfyknke ytykdlirea kyiskvlgie kgekvvnfme nrpeficsff
       61 giwnskgvpi nidagytaee leyiltdadp kvimtsnknl kvveeaikls gkniriincd
      121 eikspedfev deyviyspep edigvllyts gttgkpkgvv ltfdnlmsnv daiieikmat
      181 pkdrllallp yhhvlplsin llmaihigtl vvlidelsas ailgalqkyk itivvgvprl
      241 wemihkglme kiksskianl lfelckkvks vtlskivfkk vhqalggnir ylvsggakld
      301 pnimddfkvl gikvlegygl tetspiiaft rpddvcigtv gktipgvevk iaedgellvk
      361 grnvlkeyyn kpeatkeakd engwfhtgdl gkiengyiti igrkkemivl sngkninpid
      421 ieneiakgsd likeiavveh nnhllalvyp dfklikersi tnitetlkwd iidsyninap
      481 ayrkileiki vkdefpktkl gklrrfmlkd ilknledgge nahkerpedp etktrefqtl
      541 aqyikeekge niypdshiei dlgldsldii qlnsfiektf gfkikeeeai dlkvikdice
      601 yirknskeyh lekinwseil kesidyplps snmiwltkif fapilkfylg lkikgiekls
      661 kepriiicnh esfidafavq rlfkgdmlkn tyyfaikkhf dkaglrfman hgniilmdin
      721 enlkeslqis aevlkegknl vifpegartr dgklqdfkkf fgilskelni pvtvlgidga
      781 yesmpfgsif prpakiklev lgevnpsgls veeivnnske iirvwksgk
//
LOCUS       WP_235246106             231 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerophosphodiester phosphodiesterase family protein
            [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235246106
VERSION     WP_235246106.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 231)
  AUTHORS   Kim,H. and Farrand,S.K.
  TITLE     Characterization of the acc operon from the nopaline-type Ti
            plasmid pTiC58, which encodes utilization of agrocinopines A and B
            and susceptibility to agrocin 84
  JOURNAL   J Bacteriol 179 (23), 7559-7572 (1997)
   PUBMED   9393724
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03009.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..231
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /GO_function="GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=25268
     Region          1..224
                     /region_name="PI-PLCc_GDPD_SF"
                     /note="Catalytic domain of phosphoinositide-specific
                     phospholipase C-like phosphodiesterases superfamily;
                     cl14615"
                     /db_xref="CDD:472694"
     Site            order(16,18,82,110,193)
                     /site_type="active"
                     /db_xref="CDD:176498"
ORIGIN      
        1 msafgaavdm gfryvetdvh atsddvvvaf hderldrvtd rtgaimvmpy eevrqakigd
       61 tehvptleel ldawpdlrvn idiksqhait ptvrvierak ahdrvclasf sdkrrlaaqr
      121 rlsrpvatsa gqsvgamfra aattpsmwra gvvkrslatv dglqipvshr gvplvtpssl
      181 asahqagafv hvwtindade mrhlldqgvd glvsdradll kevliergqw s
//
LOCUS       WP_235245197             202 aa            linear   BCT 02-MAR-2025
DEFINITION  antirestriction protein ArdA [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235245197
VERSION     WP_235245197.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 202)
  AUTHORS   Nekrasov,S.V., Agafonova,O.V., Belogurova,N.G., Delver,E.P. and
            Belogurov,A.A.
  TITLE     Plasmid-encoded antirestriction protein ArdA can discriminate
            between type I methyltransferase and complete
            restriction-modification system
  JOURNAL   J Mol Biol 365 (2), 284-297 (2007)
   PUBMED   17069852
REFERENCE   2  (residues 1 to 202)
  AUTHORS   Thomas,A.T., Brammar,W.J. and Wilkins,B.M.
  TITLE     Plasmid R16 ArdA protein preferentially targets restriction
            activity of the type I restriction-modification system EcoKI
  JOURNAL   J Bacteriol 185 (6), 2022-2025 (2003)
   PUBMED   12618468
REFERENCE   3  (residues 1 to 202)
  AUTHORS   Belogurov,A.A., Delver,E.P. and Rodzevich,O.V.
  TITLE     IncN plasmid pKM101 and IncI1 plasmid ColIb-P9 encode homologous
            antirestriction proteins in their leading regions
  JOURNAL   J Bacteriol 174 (15), 5079-5085 (1992)
   PUBMED   1321121
REFERENCE   4  (residues 1 to 202)
  AUTHORS   Delver,E.P., Kotova,V.U., Zavilgelsky,G.B. and Belogurov,A.A.
  TITLE     Nucleotide sequence of the gene (ard) encoding the antirestriction
            protein of plasmid colIb-P9
  JOURNAL   J Bacteriol 173 (18), 5887-5892 (1991)
   PUBMED   1653225
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018926.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07275.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..202
                     /product="antirestriction protein ArdA"
                     /calculated_mol_wt=22176
     Region          23..200
                     /region_name="ArdA"
                     /note="Antirestriction protein (ArdA); cl01953"
                     /db_xref="CDD:470408"
ORIGIN      
        1 mnehdprtek atnpereqap rlhpkvwigs wadyndgrlh gnwcdaavet etlwadvqai
       61 latshdlaae dfgifdhdgf ggyqpgesdq lehvatvarg iaehgpafaa yaelhdgdls
      121 mlssftdayl gehestvawa eafmdesgar etiermaqeq vgdlaryvhi dteswaqdaw
      181 lsgdvavahr peggvwifss np
//
LOCUS       WP_235246133             214 aa            linear   BCT 02-MAR-2025
DEFINITION  TrmH family RNA methyltransferase [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235246133
VERSION     WP_235246133.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 214)
  AUTHORS   Persson,B.C., Jager,G. and Gustafsson,C.
  TITLE     The spoU gene of Escherichia coli, the fourth gene of the spoT
            operon, is essential for tRNA (Gm18) 2'-O-methyltransferase
            activity
  JOURNAL   Nucleic Acids Res 25 (20), 4093-4097 (1997)
   PUBMED   9321663
REFERENCE   2  (residues 1 to 214)
  AUTHORS   Koonin,E.V. and Rudd,K.E.
  TITLE     SpoU protein of Escherichia coli belongs to a new family of
            putative rRNA methylases
  JOURNAL   Nucleic Acids Res 21 (23), 5519 (1993)
   PUBMED   8265370
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012797.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00588.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..214
                     /product="TrmH family RNA methyltransferase"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006396 - RNA processing [Evidence IEA]"
                     /calculated_mol_wt=22912
     Region          12..>63
                     /region_name="COG3364"
                     /note="Predicted nucleic acid-binding protein, contains
                     Zn-ribbon domain [General function prediction only]"
                     /db_xref="CDD:442591"
     Region          63..212
                     /region_name="SPOUT_MTase"
                     /note="SPOUT superfamily of SAM-dependent RNA
                     methyltransferases; cl38912"
                     /db_xref="CDD:476814"
     Site            order(141..143,169..172,188..190,199,201,204)
                     /site_type="other"
                     /note="SAM binding site [chemical binding]"
                     /db_xref="CDD:349952"
ORIGIN      
        1 madqihptag ghrmatctqc qlrfpmgqld slpgcphcgg elhmgeeyhs pepadspppg
       61 revvavldnv rslmnvgvif rtsdalgirh lylsgitppg dhpkmartal gsqetvgwsh
      121 hkhgpslise lqsegwsiwa veatptaqqi aaitepgqqd mperiamvvg hevggidpdi
      181 lavadrhvml plrgikrsvn vstafsmvah qlth
//
LOCUS       WP_235246154             195 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5998 family protein [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235246154
VERSION     WP_235246154.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 195)
  AUTHORS   Lim,Y.H., Wong,F.T., Yeo,W.L., Ching,K.C., Lim,Y.W., Heng,E.,
            Chen,S., Tsai,D.J., Lauderdale,T.L., Shia,K.S., Ho,Y.S., Hoon,S.,
            Ang,E.L., Zhang,M.M. and Zhao,H.
  TITLE     Auroramycin: A Potent Antibiotic from Streptomyces roseosporus by
            CRISPR-Cas9 Activation
  JOURNAL   Chembiochem (2018) In press
   PUBMED   29799651
  REMARK    Publication Status: Available-Online prior to print
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040294.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19461.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..195
                     /product="DUF5998 family protein"
                     /calculated_mol_wt=20942
     Region          14..194
                     /region_name="DUF5998"
                     /note="Family of unknown function (DUF5998); pfam19461"
                     /db_xref="CDD:437293"
ORIGIN      
        1 mprrqptsvl peglnrdied agylpavvrd ivatalgndt vvthlvhqem tfdqeavrrh
       61 ltvlvltehr lviahaddhe saepgrqhma tattevvtir svrnvmlthv fpepstfkgg
      121 lagravtltl gwgsvsrldl mpatcgdpsc egdhgyegtv asgdislria adsegepale
      181 ralhfaqlls arlgr
//
LOCUS       WP_235246164             361 aa            linear   BCT 02-MAR-2025
DEFINITION  3'-5' exonuclease [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235246164
VERSION     WP_235246164.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 361)
  AUTHORS   Ozawa,K., Horan,N.P., Robinson,A., Yagi,H., Hill,F.R., Jergic,S.,
            Xu,Z.Q., Loscha,K.V., Li,N., Tehei,M., Oakley,A.J., Otting,G.,
            Huber,T. and Dixon,N.E.
  TITLE     Proofreading exonuclease on a tether: the complex between the E.
            coli DNA polymerase III subunits alpha, epsilon, theta; and beta
            reveals a highly flexible arrangement of the proofreading domain
  JOURNAL   Nucleic Acids Res 41 (10), 5354-5367 (2013)
   PUBMED   23580545
REFERENCE   2  (residues 1 to 361)
  AUTHORS   Viswanathan,M. and Lovett,S.T.
  TITLE     Exonuclease X of Escherichia coli. A novel 3'-5' DNase and Dnaq
            superfamily member involved in DNA repair
  JOURNAL   J Biol Chem 274 (42), 30094-30100 (1999)
   PUBMED   10514496
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024754.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13361.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..361
                     /product="3'-5' exonuclease"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=39148
     Region          <1..340
                     /region_name="RecB"
                     /note="3#-5# helicase subunit RecB of the DNA repair
                     enzyme RecBCD (exonuclease V) [Replication, recombination
                     and repair]; COG1074"
                     /db_xref="CDD:440692"
ORIGIN      
        1 mrtnkefeai gkaladlnip sviasaanvl ltaaatewlt vltalasphr gslarsaalt
       61 slmgndaltl dariqadprr lddelsgelq mlatlvgerg vaalleysli ngltdrvvtr
      121 pdgerhltdl rqvgemlhhv shreqltpag latwlaehmg ndvlasgarv rrlesddaav
      181 qmaslhaskg lqwpvvylps ladryisdek lprfhsepeh qrslyvggkd gpgfsdahvq
      241 yaaedagesl rllyvgftra qsqvvawwap tgqntrpapl hrvlfgrard tshipdktal
      301 psdrdawqns kpsqrvatsa wnmlslptll rvnsparlfr pahalspgrw tpsgaaphta
      361 p
//
LOCUS       WP_235246234             128 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1731 domain-containing protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235246234
VERSION     WP_235246234.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019938.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08338.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..128
                     /product="DUF1731 domain-containing protein"
                     /calculated_mol_wt=13910
     Region          <1..124
                     /region_name="YfcH"
                     /note="NAD dependent epimerase/dehydratase family enzyme
                     [General function prediction only]; COG1090"
                     /db_xref="CDD:440707"
ORIGIN      
        1 maklmplakf glagplgsgk qywawitlhd hvralmflid hrditgpvnl acpqpsqqvd
       61 vvkalgdqln rpalipapti alkvalgqma seilgsqral ptvlsdngfa wdheelehat
      121 qwlveqde
//
LOCUS       WP_235246254             151 aa            linear   BCT 02-MAR-2025
DEFINITION  FtsW/RodA/SpoVE family cell cycle protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235246254
VERSION     WP_235246254.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 151)
  AUTHORS   Henriques,A.O., Glaser,P., Piggot,P.J. and Moran,C.P. Jr.
  TITLE     Control of cell shape and elongation by the rodA gene in Bacillus
            subtilis
  JOURNAL   Mol Microbiol 28 (2), 235-247 (1998)
   PUBMED   9622350
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013279.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01098.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..151
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0051301 - cell division [Evidence IEA]"
                     /calculated_mol_wt=15996
     Region          41..>121
                     /region_name="FtsW"
                     /note="Peptodoglycan polymerase FtsW/RodA/SpoVE [Cell
                     cycle control, cell division, chromosome partitioning];
                     COG0772"
                     /db_xref="CDD:440535"
ORIGIN      
        1 mtttsrnvar arkvsssqpq tagsslasag ewlrspvapy ylvlisvasl vsiglvmvls
       61 astvqeyaat gnsyglflqq lmfmsigval ayiasrlpia wwkrlaipgm flaiglqalv
      121 fsplgvdfka tatgfpwagk pcslpslprw q
//
LOCUS       WP_235246292             259 aa            linear   BCT 02-MAR-2025
DEFINITION  Sir2 family NAD-dependent protein deacetylase [Ornithinimicrobium
            sp. INDO-MA30-4].
ACCESSION   WP_235246292
VERSION     WP_235246292.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 259)
  AUTHORS   North,B.J. and Verdin,E.
  TITLE     Sirtuins: Sir2-related NAD-dependent protein deacetylases
  JOURNAL   Genome Biol 5 (5), 224 (2004)
   PUBMED   15128440
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014228.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02146.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..259
                     /product="Sir2 family NAD-dependent protein deacetylase"
                     /EC_number="2.3.1.286"
                     /GO_function="GO:0070403 - NAD+ binding [Evidence IEA]"
                     /calculated_mol_wt=28291
     Region          2..241
                     /region_name="SIR2"
                     /note="SIR2 superfamily of proteins includes silent
                     information regulator 2 (Sir2) enzymes which catalyze
                     NAD+-dependent protein/histone deacetylation, where the
                     acetyl group from the lysine epsilon-amino group is
                     transferred to the ADP-ribose moiety of NAD+; cl00195"
                     /db_xref="CDD:444738"
ORIGIN      
        1 mstasgipdy rgpdgqrrvt lmqyseflad eagrrrywsr aytgwtrfqq aepnrahyal
       61 adieragflt sivtqnvdgl hqragaeqvl elhgtlgrvt cldcsaafsr atvhrwltla
      121 npnfdvqage irpdgdvlid qervdsfvla hcsrcesnkl kpdvvffggs vpkprvdaay
      181 ellgrsrall vvgsslqvms gyrfvraaka egkpvviltr gqtrgdadas vkvdalladv
      241 lprltadlva eedtgrldg
//
LOCUS       WP_235246313             154 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235246313
VERSION     WP_235246313.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024945.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13556.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..154
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=16724
     Region          <7..151
                     /region_name="CdaR"
                     /note="Sugar diacid utilization regulator CdaR
                     [Transcription, Signal transduction mechanisms]; COG3835"
                     /db_xref="CDD:443046"
ORIGIN      
        1 msatapvlqe saalaarggr iglsapttya qlpialsqgq aaqritsdde pvrewarsss
       61 qglewiqevp harararail apllvegsee llpslrvwle atgswdvasr elgihrhtlr
      121 rrintietml drdlsgmnar tdvwlalqal danl
//
LOCUS       WP_235246330              99 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA glycosylase AlkZ-like family protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235246330
VERSION     WP_235246330.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 99)
  AUTHORS   Bradley,N.P., Washburn,L.A., Christov,P.P., Watanabe,C.M.H. and
            Eichman,B.F.
  TITLE     Escherichia coli YcaQ is a DNA glycosylase that unhooks DNA
            interstrand crosslinks
  JOURNAL   Nucleic Acids Res 48 (13), 7005-7017 (2020)
   PUBMED   32409837
REFERENCE   2  (residues 1 to 99)
  AUTHORS   Mullins,E.A., Warren,G.M., Bradley,N.P. and Eichman,B.F.
  TITLE     Structure of a DNA glycosylase that unhooks interstrand cross-links
  JOURNAL   Proc Natl Acad Sci U S A 114 (17), 4400-4405 (2017)
   PUBMED   28396405
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017984.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06224.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..99
                     /product="DNA glycosylase AlkZ-like family protein"
                     /GO_function="GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA]"
                     /GO_process="GO:0036297 - interstrand cross-link repair
                     [Evidence IEA]"
                     /calculated_mol_wt=10845
     Region          15..>94
                     /region_name="HTH_42"
                     /note="Winged helix DNA-binding domain; cl19833"
                     /db_xref="CDD:473220"
ORIGIN      
        1 mldqfrdgta qapglsrqpr plveqwahea sfvppqtwlh ftfgmaaprh qvwaddfsvk
       61 ypglldsvrd aieqlgpmta rdlasvarsr slgmelvgg
//
LOCUS       WP_235246410             196 aa            linear   BCT 02-MAR-2025
DEFINITION  DMT family transporter [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235246410
VERSION     WP_235246410.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 196)
  AUTHORS   Jack,D.L., Yang,N.M. and Saier,M.H. Jr.
  TITLE     The drug/metabolite transporter superfamily
  JOURNAL   Eur J Biochem 268 (13), 3620-3639 (2001)
   PUBMED   11432728
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10007109
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..196
                     /product="DMT family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=20011
     Region          28..158
                     /region_name="ydcZ"
                     /note="Uncharacterized membrane protein YdcZ, DUF606
                     family [Function unknown]; COG3238"
                     /db_xref="CDD:442470"
ORIGIN      
        1 mptesgataa agstrtsavl snsalqswal aaaflcgali aiqsrmngrl seavgsfpaa
       61 wfsfgsglvv ltlllfskaq rvrvgrvvsa lrtrelvwwq mlggvaggll vgsqtyavpi
      121 igvaafliat iggqtvcalf vdryglgpap aqalsvlrvl aaglavvgva vaassgsraq
      181 arpsfpfcwa swwawa
//
LOCUS       WP_235246485             226 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235246485
VERSION     WP_235246485.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 226)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..226
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=23790
     Region          30..>211
                     /region_name="UvrD"
                     /note="Superfamily I DNA or RNA helicase [Replication,
                     recombination and repair]; COG0210"
                     /db_xref="CDD:439980"
ORIGIN      
        1 msletsttvp ptvtwsaldi akalgspppt peqqaiiegp lestlvvaga gsgktetmas
       61 rvlwlvangl vrpdqilglt ftrkaalela trltsklral dgvidhedld ivgvapvvst
      121 yhayagrlvs ehglrkgiep gsrllseaas wqlahevvhs ytgemsqvtg adstiveavl
      181 rlsgemaehl qdaesimewl ssaadqlaav ppgktdkslg qkrapr
//
LOCUS       WP_235246500             186 aa            linear   BCT 02-MAR-2025
DEFINITION  riboflavin kinase [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235246500
VERSION     WP_235246500.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Wang,W., Kim,R., Yokota,H. and Kim,S.H.
  TITLE     Crystal structure of flavin binding to FAD synthetase of Thermotoga
            maritima
  JOURNAL   Proteins 58 (1), 246-248 (2005)
   PUBMED   15468322
REFERENCE   2  (residues 1 to 186)
  AUTHORS   Mack,M., van Loon,A.P. and Hohmann,H.P.
  TITLE     Regulation of riboflavin biosynthesis in Bacillus subtilis is
            affected by the activity of the flavokinase/flavin adenine
            dinucleotide synthetase encoded by ribC
  JOURNAL   J Bacteriol 180 (4), 950-955 (1998)
   PUBMED   9473052
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013821.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01687.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..186
                     /product="riboflavin kinase"
                     /calculated_mol_wt=20728
     Region          <1..182
                     /region_name="RibF"
                     /note="FAD synthase [Coenzyme transport and metabolism];
                     COG0196"
                     /db_xref="CDD:439966"
ORIGIN      
        1 mrelgkqfnf evvtqdavge hqegqrhwss tslrkalaag dissandvlg rthrvsgtvv
       61 hghhrgrelg yptanlcaes eglipadgvy agwmvrhdla endpehrlpa aisvgtnptf
      121 ddvlrrtvea yvldrvdldl yhehvsidfv qrlrgnlkfd sieellvqma ndvdrcrqll
      181 aqpgrr
//
LOCUS       WP_235246189             233 aa            linear   BCT 02-MAR-2025
DEFINITION  CHRD domain-containing protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235246189
VERSION     WP_235246189.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 233)
  AUTHORS   Hyvonen,M.
  TITLE     CHRD, a novel domain in the BMP inhibitor chordin, is also found in
            microbial proteins
  JOURNAL   Trends Biochem Sci 28 (9), 470-473 (2003)
   PUBMED   13678956
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019095.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07452.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..233
                     /product="CHRD domain-containing protein"
                     /calculated_mol_wt=22933
ORIGIN      
        1 mafagpaaae heqdlmaelt qlndsgasgt ayagvsgtev tisletsgll adaphaqhih
       61 iggtnscpdp nmegtgfega irtldaadsy ggvqvsltke pgetgpdaal dvanfptgda
      121 tysrtievsq evadqiaagd gvvvvhgvdh dgdgeyggdi esdldpslps eatdpaacge
      181 lnptmdmpag gvatgggsta gmeyagvaaf galalgagvv giaatrrren ass
//
LOCUS       WP_235246630              75 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235246630
VERSION     WP_235246630.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037170.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18029.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..75
                     /product="VOC family protein"
                     /calculated_mol_wt=8009
     Region          <20..70
                     /region_name="Glyoxalase_6"
                     /note="Glyoxalase-like domain; pfam18029"
                     /db_xref="CDD:436220"
ORIGIN      
        1 maghpggrrg lalpeqsfeq rwhfdvwvsh degesrlrav ldaggrlvsd agapgywvve
       61 dadgnrscic tssgr
//
LOCUS       WP_235246638             251 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235246638
VERSION     WP_235246638.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 251)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..251
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=25198
     Region          63..>195
                     /region_name="FrsA"
                     /note="Fermentation-respiration switch esterase FrsA,
                     DUF1100 family [Signal transduction mechanisms]; COG1073"
                     /db_xref="CDD:440691"
ORIGIN      
        1 mkplvrpahr ltrwaraapg vslfaavgvt aplaqaaesd dssaaeptts tvavgdesdg
       61 stveldvdtf ypaqtpapav vlahgfggsk dsvaaqaadl qsagyvvlty targfgasgg
      121 rvhlndpdfe iadvsalidv lasddavvqd gnddprvava ggsyggaaal msagaddrvd
      181 svvaaitwnd lgdaffpqsa iqnpdqagfa nepidqpgpl kpggpptssp aslratpvda
      241 dlltrrsats s
//
LOCUS       WP_235246728             416 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235246728
VERSION     WP_235246728.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024554.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13155.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..416
                     /product="toprim domain-containing protein"
                     /calculated_mol_wt=44535
     Region          <4..312
                     /region_name="DnaG"
                     /note="DNA primase (bacterial type) [Replication,
                     recombination and repair]; COG0358"
                     /db_xref="CDD:440127"
ORIGIN      
        1 mrpgyapagw dnlvnhargq gatdtelles glatmtrrgt lidrfrdrav fpiihqdril
       61 gfvgrrnpah tdetphagpk ylntpstalf tkgnqlygal pdlsrgdatp vlvegpmdah
      121 aitlatagry vgvaplgtal tesqasqlaa ypqapiiatd adlaghvaae kdhwllaqha
      181 ilpsrailaa gsdpsdller ggpdalldal enpvassqvl lrerldnmpa etglasaatv
      241 aasgdptlwg eaavamatrf evsdtqarta llaavkewnt dprqvvrdqi scspdlrqrl
      301 eaqadlppeq rwagtatrid arltsaadwp alanlinqlh qeghdvprll ddsiadnphl
      361 ghtparemry rlaaqasrty qpcgnpprrg iptdlsprfs hdrltppkdi gsgptr
//
LOCUS       WP_235246774             311 aa            linear   BCT 02-MAR-2025
DEFINITION  zeta toxin family protein [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235246774
VERSION     WP_235246774.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 311)
  AUTHORS   Meinhart,A., Alonso,J.C., Strater,N. and Saenger,W.
  TITLE     Crystal structure of the plasmid maintenance system epsilon/zeta:
            functional mechanism of toxin zeta and inactivation by epsilon 2
            zeta 2 complex formation
  JOURNAL   Proc Natl Acad Sci U S A 100 (4), 1661-1666 (2003)
   PUBMED   12571357
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018154.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06414.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..311
                     /product="zeta toxin family protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /calculated_mol_wt=33776
     Region          23..207
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 meepqlraiw drdvrssvfk datpdsrptt vllggqpgvg ktrtgvqaqn mhsgqaivpi
       61 vgddfrrfhp dydelvdsdp lrmpdataaa agrwiqmsvd hanaqqfssl iegtwrspdv
      121 pldgarlakg ygrevhaivv avpakvsrls tlerfytdad agrparwtpp dahdqtvahl
      181 pstvraians qdvdrftvvd rvgevlfdqq gwtpgradaa gevfnaafdr pltvqesrdf
      241 rltatrvigs herhtqgiss adatirqvtt tadalaaiar rtqslkrspg aqearlsita
      301 aradrdtgpt r
//
LOCUS       WP_235246815             578 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Escherichia coli].
ACCESSION   WP_235246815
VERSION     WP_235246815.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 578)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 578)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 578)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 578)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..578
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=63018
     Region          22..>565
                     /region_name="ABC2_perm_RbbA"
                     /note="ribosome-associated ATPase/putative transporter
                     RbbA; NF033858"
                     /db_xref="CDD:468210"
ORIGIN      
        1 mndavitlng lekrfpgmnk pavapldcti hagyvtglvg pdgagkttlm rmlagllkpd
       61 sgsatvigfd pikndgalha vlgympqkfg lyedltvmen lnlyadlrsv tgearkqtfs
      121 rlleftslgp ftgrlagkls ggmkqklgla ctlvgepkvl lldepgvgvd pisrrelwqm
      181 vhelagegml ilwstsylde aeqcrdvllm negellyqge ptaltqtmag rsflmtsphe
      241 gnrkllqral klpqvsdgmi qgksvrlilk keatpddirh adgmpeinin ettprfedaf
      301 idllggagts esplgailht vegtpgetvi eakeltkkfg dfaatdhvnf avkrgeifgl
      361 lgpngagkst tfkmmcgllv ptsgqalvlg mdlkessgka rqhlgymaqr fslygnltve
      421 qnlrffsgvy glrgraqnek isrmseafgl ksiashatde lplgfkqrla lacslmhepd
      481 ilfldeptsg vdpitrrefw lhinsmvekg vtvmvtthfm deaeycdrig lvyrgklias
      541 gtpddlkaqs andeqpdptm eqafiqlihd wdkehsne
//
LOCUS       WP_235246841             168 aa            linear   BCT 02-MAR-2025
DEFINITION  Pycsar system effector family protein [Ornithinimicrobium sp.
            INDO-MA30-4].
ACCESSION   WP_235246841
VERSION     WP_235246841.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (residues 1 to 168)
  AUTHORS   Tal,N., Morehouse,B.R., Millman,A., Stokar-Avihail,A., Avraham,C.,
            Fedorenko,T., Yirmiya,E., Herbst,E., Brandis,A., Mehlman,T.,
            Oppenheimer-Shaanan,Y., Keszei,A.F.A., Shao,S., Amitai,G.,
            Kranzusch,P.J. and Sorek,R.
  TITLE     Cyclic CMP and cyclic UMP mediate bacterial immunity against phages
  JOURNAL   Cell 184 (23), 5728-5739 (2021)
   PUBMED   34644530
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040152.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18967.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..168
                     /product="Pycsar system effector family protein"
                     /calculated_mol_wt=18183
     Region          50..154
                     /region_name="DUF5706"
                     /note="Family of unknown function (DUF5706); pfam18967"
                     /db_xref="CDD:465934"
ORIGIN      
        1 mvtdeqawkl lsmvnewirf adakagatla fsgamgtlly nvvnelhrrt awldvtvvmt
       61 callfaavll agwtiaprik dkdavpdtvn slffasiaan yrgkrlayrd elsrlsidsq
      121 alveeladqi hanatiatak nqrvawavra glvagvllal vtiqvsll
//
LOCUS       WP_235246844             934 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein [Ornithinimicrobium sp. INDO-MA30-4].
ACCESSION   WP_235246844
VERSION     WP_235246844.1
KEYWORDS    RefSeq.
SOURCE      Ornithinimicrobium sp. INDO-MA30-4
  ORGANISM  Ornithinimicrobium sp. INDO-MA30-4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..934
                     /organism="Ornithinimicrobium sp. INDO-MA30-4"
                     /db_xref="taxon:2908651"
     Protein         1..934
                     /product="helicase-related protein"
                     /calculated_mol_wt=105157
     Region          <1..44
                     /region_name="PLDc_SF"
                     /note="Catalytic domain of phospholipase D superfamily
                     proteins; cl15239"
                     /db_xref="CDD:472788"
     Region          <92..694
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
ORIGIN      
        1 mgyvgssnlt gaglnrnlel nidvqdsdat qklaawfqer wedrfsldit aeiidlians
       61 wadedqptpf evylkvchsl sqdardgmgy vlpksmsdll ldyqesavrt lsrrivrrgg
      121 tmlgdvvglg ktltavatal mlqaaedyst lvlcpknlqp mwekhieeyd ingrvvpysm
      181 adkvlpelkr fnlvicdesh nlrnnstiay daihqyirtn sskvllltat pynlaftdva
      241 nqiglyided ddlgivptea lhndpnlmar vdgkintlta frkseepedw krlmsdhlvr
      301 rtrsfikrta kkelvtgpdg tttereylqf angqkfhfpt rvstpvshqf aaddpaalme
      361 dettldavrd lllpryrlad ydnpkaphtd edtknlddir sgrgnvsgfv riglfkrlss
      421 sgysfilslq rqrarnelfi haidhklrip lgsftdkqin vtdedietdg slhgsaetry
      481 kslaeslpak tkwvnttvfk ptlrhdlvkd tetitsller fgdwdstrds kinalvdllt
      541 ndhpgekvlv fteygdtady vahalteagi anvalatgdt dnpaevarrf spnsnrlpse
      601 dqsvsvever pvdvlvatdv lsegqnlqds hiivnydlpw aiiriiqrag rvdrigqksd
      661 tvnlylithe nieeqirlrq rikerlgaaa eafgsdekff ggdkeikild dlykgrvted
      721 dsddeaevds vseawlvwsn aldkhpqita rvlrlqdmih strdqymnes hggdllhlhr
      781 lrrrrlrhrh hhrprrpgad phplealrif raepttptap lrpdhfdret alvqgplkte
      841 tiaagnlkgv rkwawqrlgg tvfgekasaa ldalhtrplt ehanmrlsqa rrnkyslddl
      901 adlinqlhde drlvigatdt dtikivcslg vtss
//
LOCUS       WP_235246955             498 aa            linear   BCT 02-MAR-2025
DEFINITION  MafB family polymorphic toxin [Neisseria gonorrhoeae].
ACCESSION   WP_235246955
VERSION     WP_235246955.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 498)
  AUTHORS   Jamet,A., Jousset,A.B., Euphrasie,D., Mukorako,P., Boucharlat,A.,
            Ducousso,A., Charbit,A. and Nassif,X.
  TITLE     A new family of secreted toxins in pathogenic Neisseria species
  JOURNAL   PLoS Pathog 11 (1), e1004592 (2015)
   PUBMED   25569427
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018014.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06255.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..498
                     /product="MafB family polymorphic toxin"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI."
                     /calculated_mol_wt=53808
     Region          30..352
                     /region_name="MafB"
                     /note="Neisseria toxin MafB; pfam06255"
                     /db_xref="CDD:283833"
ORIGIN      
        1 mnlpiqkfmm lfaaaisllq ipishangld arlrddmqak hyepggkyhl fgngrgsvkn
       61 rvcavqtfda tavgpilpit hertgfegii gyethfsghg hevhspfdnh dsrstsdfsg
      121 gvdggftvyq lhrtgseihp adgydgpqgg gypepqgard iysyhikgts tktkintvpq
      181 apfsdrwlke nagaasgfls radeagkliw endpdknwwg nrmddvrgii qgaanpfltg
      241 fqglgvgait dsavnpvtya aarktlqgih nlgnlspeaq laaasllqds afavkdgins
      301 arqwadahpn itataqtala vaeaagtvwg gkkvelnptk wdwvkntgyk kpaarhmqtv
      361 dgemaggnrp pksitsegka naatypklvn qlneqnlnni aaqdprlsla ihegkknfpi
      421 gtatyeeadr lgkiwvgega rqtsgggwls rdgtrqyrpp tekksqfatt giqanfetyt
      481 idsnekrnki knghlnir
//
LOCUS       WP_235246963            1381 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein [Neisseria gonorrhoeae].
ACCESSION   WP_235246963
VERSION     WP_235246963.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 1381)
  AUTHORS   Wang,J., Hofnung,M. and Charbit,A.
  TITLE     The C-terminal portion of the tail fiber protein of bacteriophage
            lambda is responsible for binding to LamB, its receptor at the
            surface of Escherichia coli K-12
  JOURNAL   J Bacteriol 182 (2), 508-512 (2000)
   PUBMED   10629200
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024939.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13550.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1381
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         1..1381
                     /product="phage tail protein"
                     /calculated_mol_wt=150424
     Region          <177..1014
                     /region_name="COG4733"
                     /note="Phage-related protein, tail protein J [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443767"
     Region          222..405
                     /region_name="Phage-tail_3"
                     /note="Putative phage tail protein; pfam13550"
                     /db_xref="CDD:433300"
     Region          1054..1173
                     /region_name="DUF3672"
                     /note="Fibronectin type III protein; pfam12421"
                     /db_xref="CDD:289206"
ORIGIN      
        1 mggksstvts aeerilslqv qrssqgltlp viygrtrvag nliwygdfvt iehkavtrqg
       61 gkggggvkqv gisytyeaav mlalcegeiq gvgrvwrdke kfdspaqlrl tlmrggdeqp
      121 lwthlqqakh qgqalnysgt aylcspnyel tksaqiyqhn fevigksgys gnipdanpre
      181 ivldlltnqr ygcgfpsqni gdtdrysnyc ravgiflspa yteqgeaqrn iselleqtns
      241 aavfsqgrlk iipygdgshs gngavyvadn kaaydltddd fivsgaqdpv kagrktnada
      301 fnqiqveyld rdndynvaia eakdqanieq yglrpkdavk mhgicdakva qkvaqqllqr
      361 alyvrneyef klgwkyclle pmdivtltda glglnktpvr iteieedgeg vlsvkaedcp
      421 agvytvseyp tqpssgysad ynvspgnahv pvifeaplql tggepqiwla tagggmwgga
      481 evwvsadgds ytrvgavnrk arfgaltadl pdgavfdrtn tlgveisagq ltggteqdsr
      541 dlltlcyvdg eflayadael kgvgrytlgn ltrgaygsav nahaagsrfa ridealfkya
      601 vprnwigrtv wvklvsynvf gggiqdlaev paysytiega plgqiqnlrl tsswaygkea
      661 viawdkldga dtydveiyag gsrrrlravd givdnsytyt qadmkadggq vrgivfkvrg
      721 ravtgktgnw aqiaaqnpql qalqgisids glkqafftcq kpdeedfagi ivwvcenaac
      781 paadankayd gaetfitiak cggkplekgk tyylraagyd sfgkdnlkis gsisftvydv
      841 satdlsessl nkalrdkinl idgngagsvn erveavrsta dgnaaavqth arsingleaq
      901 ytvkvdangk vagfglattp kngtpeskfi vnadrfgiga agkadvfpfv vdtqknrvgi
      961 ngelvvngka vvdklnagdi hggkiaadtl danrlkagsv tareigaaav tadkiganav
     1021 tadkiqvadl savssnlgsi tggslniggg nftvssdgil tadnavirgr ieadsgyfng
     1081 tvrassvegd vlrahrlrwt egnvwvldld kdplprvlip nfyvvsetfg nnrvqaklll
     1141 nggvlaprev retenytnyi wrgrtfgrye dlppramggg dyteqsgsry rtrleyqiqv
     1201 ipagkpvslk lslashesvf spfvsvsyla qsdyeykqll grmvwrtfae sfrydskkqv
     1261 ylggdrrvhd yqnqmykhwn ayggllqlpd diygisfeyr pftnadwstm lafdrsdkfv
     1321 vvkkyrghap qqyslfqeef ntavpksnll ffvehwwqyi elrnirvlip esrenevwqv
     1381 g
//
LOCUS       WP_235246976              72 aa            linear   BCT 02-MAR-2025
DEFINITION  IS3 family transposase, partial [Neisseria gonorrhoeae].
ACCESSION   WP_235246976
VERSION     WP_235246976.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024729.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13333.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         <1..72
                     /product="IS3 family transposase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <2..72
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 lsrkgncldn aamesffgtl ksecfhtcky dsvteseaal heyiryynnd riklklkgls
       61 pvqyriqslk aa
//
LOCUS       WP_235247067             385 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: aminotransferase class V-fold PLP-dependent enzyme
            [Fusobacterium].
ACCESSION   WP_235247067
VERSION     WP_235247067.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium
  ORGANISM  Fusobacterium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Fusobacterium"
                     /db_xref="taxon:848"
     Protein         1..385
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /calculated_mol_wt=42828
     Region          6..379
                     /region_name="am_tr_V_EF2568"
                     /note="cysteine desulfurase family protein; TIGR01977"
                     /db_xref="CDD:131032"
ORIGIN      
        1 mnreyyfdhs atsnpkpkiv idtvleaitt fngnpsrssy kknisldrki levreklanf
       61 fnistplqia ftknstesln faikglgfen chiitsvleh nsvlrplnyl kdnkgveisy
      121 itpskddkev iknitslire dtraivinhi snvtgyifni keigkiakdn nlifivdvsq
      181 sagfypidvt rdnidilcft ghkslmgiqg iggiyiregl sispiieggt gsfsklprqp
      241 lkmpemleag tsntpgilsl gagidyinsi gleniknhkt nlvnyfiksl sdipeiiiyd
      301 nfniergpvv alnvkdipss elsdilseef nictrggfhc aplahkylgt yedgavrfsf
      361 gytntikeid ycisalkeii sffyk
//
LOCUS       WP_235247149             175 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: restriction endonuclease subunit S [Fusobacterium].
ACCESSION   WP_235247149
VERSION     WP_235247149.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium
  ORGANISM  Fusobacterium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae.
REFERENCE   1  (residues 1 to 175)
  AUTHORS   Janscak,P. and Bickle,T.A.
  TITLE     The DNA recognition subunit of the type IB restriction-modification
            enzyme EcoAI tolerates circular permutions of its polypeptide chain
  JOURNAL   J Mol Biol 284 (4), 937-948 (1998)
   PUBMED   9837717
REFERENCE   2  (residues 1 to 175)
  AUTHORS   Bickle,T.A. and Kruger,D.H.
  TITLE     Biology of DNA restriction
  JOURNAL   Microbiol Rev 57 (2), 434-450 (1993)
   PUBMED   8336674
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01420.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Fusobacterium"
                     /db_xref="taxon:848"
     Protein         1..175
                     /product="restriction endonuclease subunit S"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=20070
     Region          11..164
                     /region_name="Methylase_S"
                     /note="Type I restriction modification DNA specificity
                     domain; pfam01420"
                     /db_xref="CDD:396139"
ORIGIN      
        1 mkkisltnli wkefeigdlf eikkvygkpe ntykdgeipy istsgvnngv isfrsniekk
       61 eisegncisv dpinvkcfyh iydfigrgys gasvnllysk flnkynskfi itaiekanke
      121 kasygylfng nrlkkgklll pinekgdpnw eymedyikti elekstnlie ylksk
//
LOCUS       WP_235247157             221 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase domain-containing protein [Fusobacterium
            perfoetens].
ACCESSION   WP_235247157
VERSION     WP_235247157.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024880.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13489.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..221
                     /product="methyltransferase domain-containing protein"
                     /calculated_mol_wt=25981
     Region          3..218
                     /region_name="BioC"
                     /note="malonyl-acyl carrier protein O-methyltransferase
                     BioC; TIGR02072"
                     /db_xref="CDD:273953"
ORIGIN      
        1 mefgknfsty denaiiqkkv aenltnfisk kfnnqkfdkv ielgcgtgif treflkkfei
       61 neidlndcfn trdyfkeiny knficddmne aiiknydivi ssssfqwied lekliesisk
      121 kseklafsiy idgnlkeiae hfgvglkykk iediliilkk yfknieyyse ektlnfsspi
      181 ealrhlkrtg vtiknrtsiy diksykntll tynmayfisy n
//
LOCUS       WP_235247168             388 aa            linear   BCT 02-MAR-2025
DEFINITION  prolyl oligopeptidase family serine peptidase [Fusobacterium
            perfoetens].
ACCESSION   WP_235247168
VERSION     WP_235247168.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012546.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00326.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..388
                     /product="prolyl oligopeptidase family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=43813
     Region          13..117
                     /region_name="EstA_Ig_like"
                     /note="Esterase Ig-like N-terminal domain; pfam18435"
                     /db_xref="CDD:465765"
     Region          147..378
                     /region_name="COG4099"
                     /note="Predicted peptidase [General function prediction
                     only]"
                     /db_xref="CDD:443275"
ORIGIN      
        1 mldiisknqv pfraigevfd fgpqvkeivl nfdeplntks idkdtfkvia vssnsvprki
       61 tdikfpndkt vvlelefgqn ikgaeilrwn dklfsnieip idysivqtka ietkdgkpls
      121 ienqkykisd levegvekfs sgemfglkyr dfkpkldkkk hpliiwlhga geggesnatq
      181 ilgnrggvaf veeesqkifd npyvlapqtp tfwmksfmvg dreligekdy tpdlinlikk
      241 yldenpsidr driyiggcsm ggyqtfktlv adpkifagaf itcpayepsk eelekvkdvp
      301 iwlvhassdt tvpvsnsrns fkylkslgad vvyteyeevv rdgnkydphg syfytlhndp
      361 fsgdgthifq wiaskklkka lsqqmvdf
//
LOCUS       WP_235247213             407 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Fusobacterium perfoetens].
ACCESSION   WP_235247213
VERSION     WP_235247213.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..407
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=46801
     Region          1..399
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mkvlfvnnfy kegstgkivy dlrqvcennn idtvicygrg ktkqnkknki yrlcsngyak
       61 ftkllscisg mkfgscfwqt sklisiikle kpdivhlhci ndnivniyki inylkknkis
      121 tvltlhaefm ytancgysle cnkwingcnr cprwrietss ffidrthdsw kklkkafcgf
      181 dsnlsvvsvs pwlmkrarks silcnkkhft ilngidseni fkitennlkn kynllgkkii
      241 lhvtasfsrp ikggkyviel arrlpdimfi ivgnsdinin fpknvidvgv isnqielakf
      301 ysiadlfvlt seketfcmpv aeslccgtpv vgfksgapee ialkefssfv nfgdidllei
      361 eikkwlnryi drkkvsdiar kkyskeqmgk eyidiyeeli rrnqnev
//
LOCUS       WP_235247236             137 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma factor-like helix-turn-helix DNA-binding protein
            [Fusobacterium perfoetens].
ACCESSION   WP_235247236
VERSION     WP_235247236.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 137)
  AUTHORS   Campbell,E.A., Muzzin,O., Chlenov,M., Sun,J.L., Olson,C.A.,
            Weinman,O., Trester-Zedlitz,M.L. and Darst,S.A.
  TITLE     Structure of the bacterial RNA polymerase promoter specificity
            sigma subunit
  JOURNAL   Mol Cell 9 (3), 527-539 (2002)
   PUBMED   11931761
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04545.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..137
                     /product="sigma factor-like helix-turn-helix DNA-binding
                     protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=16110
     Region          92..132
                     /region_name="Sigma70_r4"
                     /note="Sigma-70, region 4; pfam04545"
                     /db_xref="CDD:461347"
ORIGIN      
        1 mnkkeylkqg yklkqeiksl eqtleelesn ldnvkaiqys kdkleggplq ddtniiekid
       61 kiievenlik drllelktfq anlileilkl knsneknllq aryvmnltwe eiskklnysv
      121 mhihrihkka lenfetl
//
LOCUS       WP_235247244             248 aa            linear   BCT 02-MAR-2025
DEFINITION  crossover junction endodeoxyribonuclease RuvC [Fusobacterium
            perfoetens].
ACCESSION   WP_235247244
VERSION     WP_235247244.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 248)
  AUTHORS   Ariyoshi,M., Vassylyev,D.G., Iwasaki,H., Fujishima,A., Shinagawa,H.
            and Morikawa,K.
  TITLE     Preliminary crystallographic study of Escherichia coli RuvC
            protein. An endonuclease specific for Holliday junctions
  JOURNAL   J Mol Biol 241 (2), 281-282 (1994)
   PUBMED   8057369
REFERENCE   2  (residues 1 to 248)
  AUTHORS   Iwasaki,H., Takahagi,M., Shiba,T., Nakata,A. and Shinagawa,H.
  TITLE     Escherichia coli RuvC protein is an endonuclease that resolves the
            Holliday structure
  JOURNAL   EMBO J 10 (13), 4381-4389 (1991)
   PUBMED   1661673
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014166.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02075.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..248
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /EC_number="3.1.21.10"
                     /GO_function="GO:0004520 - DNA endonuclease activity
                     [Evidence IEA]"
                     /GO_process="GO:0006281 - DNA repair [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /calculated_mol_wt=28909
     Region          102..>202
                     /region_name="RuvC"
                     /note="Holliday junction resolvasome RuvABC endonuclease
                     subunit RuvC [Replication, recombination and repair];
                     COG0817"
                     /db_xref="CDD:440579"
ORIGIN      
        1 mkldlneivg kefenkynek fvvnkylfke ktnhcyevrf lltsniqmtt lnqirngtcr
       61 dvverkkqkr lkternlrer nklvaktkkv cvipkdlntk svlsidlsst stgiayshqg
      121 nivrwktiks dkddfrergf eivgeiveil ekgkidyiil edvflglnsd vlaklsevrg
      181 mlmyhikrlg ieyliippil wknrfegvpl hrkeqkefmm qkffeftgve adsddaaday
      241 milkaclm
//
LOCUS       WP_235247261             445 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: LysM peptidoglycan-binding domain-containing protein
            [Fusobacterium].
ACCESSION   WP_235247261
VERSION     WP_235247261.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium
  ORGANISM  Fusobacterium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae.
REFERENCE   1  (residues 1 to 445)
  AUTHORS   Bateman,A. and Bycroft,M.
  TITLE     The structure of a LysM domain from E. coli membrane-bound lytic
            murein transglycosylase D (MltD)
  JOURNAL   J Mol Biol 299 (4), 1113-1119 (2000)
   PUBMED   10843862
REFERENCE   2  (residues 1 to 445)
  AUTHORS   Joris,B., Englebert,S., Chu,C.P., Kariyama,R., Daneo-Moore,L.,
            Shockman,G.D. and Ghuysen,J.M.
  TITLE     Modular design of the Enterococcus hirae muramidase-2 and
            Streptococcus faecalis autolysin
  JOURNAL   FEMS Microbiol Lett 70 (3), 257-264 (1992)
   PUBMED   1352512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01476.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Fusobacterium"
                     /db_xref="taxon:848"
     Protein         1..445
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=49367
     Region          30..>267
                     /region_name="UshA"
                     /note="2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or
                     3'-nucleotidase, 5'-nucleotidase family [Nucleotide
                     transport and metabolism, Defense mechanisms]; COG0737"
                     /db_xref="CDD:440500"
     Region          <289..>378
                     /region_name="PRK13914"
                     /note="invasion associated endopeptidase"
                     /db_xref="CDD:237555"
     Region          313..355
                     /region_name="LysM"
                     /note="Lysin Motif is a small domain involved in binding
                     peptidoglycan; cd00118"
                     /db_xref="CDD:212030"
ORIGIN      
        1 mkklawlltv llvgctsvee ksqeenpivy nvaivntnnv ngnieegvgy srlatiikne
       61 eqkfgstnvf yldgggnfsg sefadssrge nvvkilnain lqattlgkgd fiygterike
      121 lekisnfriv asnvkyrtgg dfvrpyvlrn iggekvaiig ivspalydem dektkaqiki
      181 eepilvipql lelirknnid fvialtsmdd snlnrewnis divknipgmd ivissgegng
      241 ssikrvgnty ivredknfqs vgvtkidmya ndsnpqkmiy ekieakdlka ltkvekpiki
      301 ekveevvske vlhravpgdt lyslakyygv tvddiknlnp sivgnnikvg etykisekkt
      361 kivekkvetp teikaeekii ggadgkteiy ieekenqisk eevedfdsia vemndmesip
      421 qdaveigknd iptnpamedl iktlk
//
LOCUS       WP_235247297             840 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase C-terminal domain-containing protein [Fusobacterium
            perfoetens].
ACCESSION   WP_235247297
VERSION     WP_235247297.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13307.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..840
                     /product="helicase C-terminal domain-containing protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0004386 - helicase activity [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA]"
                     /GO_process="GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /calculated_mol_wt=97728
     Region          <26..84
                     /region_name="PRK00024"
                     /note="DNA repair protein RadC"
                     /db_xref="CDD:178801"
     Region          <65..>84
                     /region_name="RadC"
                     /note="RadC-like JAB domain; pfam04002"
                     /db_xref="CDD:461124"
     Region          127..826
                     /region_name="DinG"
                     /note="Rad3-related DNA helicase DinG [Replication,
                     recombination and repair]; COG1199"
                     /db_xref="CDD:440812"
ORIGIN      
        1 mdinlrltfe iqqeikkeie eaggnevffr gslnedgive niqivargnk ysvpailgrm
       61 kreeviihnh psgyiypsda dievatvfan kmnggfyivn nsvtniyvvi epyseknkki
      121 evtpyfeeng iisqnfkefe freeqlsmar hieeginnek kivveagtgt gktlaylipa
      181 iewavtnekr viistntinl qeqllnkdip mlqkimekkf ryalvkgrgn ylcnrkfyni
      241 ksgknkeile lseeqqnhlr tilewgratt tgdkselnie pdytvwemfq sesdlcfsgc
      301 phreecfffk ardekkradi lianhhiffs dlaikkqigf nndysilpey smavfdeahn
      361 vekvardyfs yeisrysfsk smnkilnvak ikdenlkqdi klfeiendni kivgqlkeii
      421 siiknsdise sqealeiidk efikshidly nhgikyferl ievfskgqng nisirikkdd
      481 vatenyfkmv edfrenfile fseylrivkk irdliseidd ingkineflk ylervesfye
      541 nfqfinrfed edfiywievn erknnaklva tplkvdgels enlydnlkqi iftsatlsvg
      601 nnfdyfkksi glleetydki ikspfdydrq mkvyipkglp npnspefmdy iqeiikifve
      661 ktqgrtfvlf tsykmlnyvy ysmkdelees gislfiqgmy prtkmvdifk rskapvlfgt
      721 dsfwegvdvk geqlssviiv klpfkvpsdp vteaiietfe qegknsfley qipesvikfk
      781 qgigrlirsk edkgiitild nrvitksygk yflesiptkn isridvedil rgdggrdekv
//
LOCUS       WP_235247446            1012 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: AAA family ATPase [Fusobacterium].
ACCESSION   WP_235247446
VERSION     WP_235247446.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium
  ORGANISM  Fusobacterium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024867.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13476.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Fusobacterium"
                     /db_xref="taxon:848"
     Protein         1..1012
                     /product="AAA family ATPase"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /GO_process="GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /calculated_mol_wt=117026
     Region          1..999
                     /region_name="sbcc"
                     /note="exonuclease SbcC; TIGR00618"
                     /db_xref="CDD:129705"
ORIGIN      
        1 mrpikleieg fqsfkerqii dfeklcecgi fgifgetgsg kstildaiil alygeipkek
       61 elsptdeglk nflnnssdkm eiyfkfalgs difeinrkyg igktkgvevl klkevlmkkn
      121 dvivaekstq ldekldeefg lgvgdfvrtv vlpqgkfsef lklrgeakrk tienifnmee
      181 ygkklkdran lekkkleaek kewesqkeni ewtssedikn cekslvdnki llenlinekk
      241 dfdiyytevn glknlleryn slvqekksle dlkehilsqq nildkssqad eikeyisknd
      301 dleknllkse ndlkiyttsk eklekqlnii kselleldkt seeletkkga vdfdkgeyqk
      361 isnaysdkki ilakektlek yrkdilhcen qisiyqeeik alnsklennq reisllpntn
      421 eesleeinsq vlqlksllkt feenqkekke idsslvalee ekeklekeki ttlknletle
      481 kekiknlafe lsktleegkp cpvcgsshhv tmdfskttnl nldkdiknis skkdkligki
      541 seiigtitel tnrkskldil yeekvmtdid ynsiqskves ltkeiedkkk elqiikekei
      601 slqnqkvkle sdiknttlnl sreeknlsnt kletetiqke ietisqnldk iyidislesl
      661 edrkitleen qeilenlekk ikenlnlknk kidlredins klsidnveis rvtsdinhls
      721 eqiksnalni slllekynfi nkedvkkyyl kenekenlkk eidgfnsnlt rvinildete
      781 knidgrtlsd dqwqeikdkk enlensitkl nidisdteka lvrkrenlik iqeidkqlvk
      841 vskklsvaed iytklrtkdf vsflvdkklk nvvamasqrl nkisngryql tsdessnfyv
      901 vdffnegkrr rtatlsgget fvvslclala lskqlqlkgk rpleffflde gfgsldskll
      961 dkvmdsieni rseekikigi ithleelklr vlkriqveka ipgergskik mi
//
LOCUS       WP_235247059             229 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: PhoU domain-containing protein [Fusobacterium].
ACCESSION   WP_235247059
VERSION     WP_235247059.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium
  ORGANISM  Fusobacterium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Liu,J., Lou,Y., Yokota,H., Adams,P.D., Kim,R. and Kim,S.H.
  TITLE     Crystal structure of a PhoU protein homologue: a new class of
            metalloprotein containing multinuclear iron clusters
  JOURNAL   J Biol Chem 280 (16), 15960-15966 (2005)
   PUBMED   15716271
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014010.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01895.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Fusobacterium"
                     /db_xref="taxon:848"
     Protein         1..229
                     /product="PhoU domain-containing protein"
                     /calculated_mol_wt=26370
     Region          2..216
                     /region_name="phoU_full"
                     /note="phosphate transport system regulatory protein PhoU;
                     TIGR02135"
                     /db_xref="CDD:273990"
ORIGIN      
        1 mrnlqesltg lnehylemlk hlsrmleini eavkdgkvsp klygecfvie dvinafevkv
       61 kedsinciar fqpaaknlra limiidgvrl iermadilks nfkvmreiel inpeintrle
      121 gamynylmri kstfdsyivs fstsdeelly tlvtadedin setkaivdki aecikrnpae
      181 tnellqvvsl vkkyerfsdh iihlvvdlvy ilkgenlrkk elldekkdi
//
LOCUS       WP_235247487             151 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: M20/M25/M40 family metallo-hydrolase [Fusobacterium].
ACCESSION   WP_235247487
VERSION     WP_235247487.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium
  ORGANISM  Fusobacterium
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae.
REFERENCE   1  (residues 1 to 151)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Fusobacterium"
                     /db_xref="taxon:848"
     Protein         1..151
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=16154
     Region          <4..149
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mqytincgvv kggaaknvva ekaflefefr vkkieeakev ikkveilkeh akekeikvvi
       61 lgglnrgpmi fdekskvlfe likskgkeld ieikgvssgg asdgnltssv gsptidglgp
      121 vgggqhstse yldldsveer inllvkvieg i
//
LOCUS       WP_235247504             496 aa            linear   BCT 02-MAR-2025
DEFINITION  dynamin family protein [Fusobacterium perfoetens].
ACCESSION   WP_235247504
VERSION     WP_235247504.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 496)
  AUTHORS   Warnock,D.E. and Schmid,S.L.
  TITLE     Dynamin GTPase, a force-generating molecular switch
  JOURNAL   Bioessays 18 (11), 885-893 (1996)
   PUBMED   8939066
REFERENCE   2  (residues 1 to 496)
  AUTHORS   Obar,R.A., Collins,C.A., Hammarback,J.A., Shpetner,H.S. and
            Vallee,R.B.
  TITLE     Molecular cloning of the microtubule-associated mechanochemical
            enzyme dynamin reveals homology with a new family of GTP-binding
            proteins
  JOURNAL   Nature 347 (6290), 256-261 (1990)
   PUBMED   2144893
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012570.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00350.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..496
                     /product="dynamin family protein"
                     /calculated_mol_wt=58390
     Region          75..333
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Region          75..246
                     /region_name="Dynamin_N"
                     /note="Dynamin family; pfam00350"
                     /db_xref="CDD:459775"
     Site            79..86
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(81..87,218,276..277,279,318..320)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            106
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            110..112
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            215..218
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(217..218,238..239)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            276..279
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            318..320
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     Region          <401..>493
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
ORIGIN      
        1 mtalekfiae nqeklvkihw ndivnnysen iglskillnd lgkdeyfnpl kdffksinkn
       61 idnyientvn psyqiaivga ikagkstlin alighdlast nvtpetatlt kfkysknnfl
      121 kvkfytvdew neiwenaqek kadifleeys hlkaeevkdy llgkkeiyqe fssidemkee
      181 ivkwtssqkk ehyfvkelei glndlklpeq iclvdtpgln diidyrskit rdyidsanai
      241 licvnaktlr neemltiarv fskakykkdk iyilgtqidt mnsfenwltq reewlkilrr
      301 eeyfetmlka kthllgissy ayskaitikt elteddiwdl nelklmnree arksrklved
      361 glytkemvce lkeriinysr iehlrdiiqv ellkdfndsl vkdfvekyki lkseinlfgk
      421 khkgiledkk kelemtseel tkkieaerer vreiekindt leekirette sfnldfskle
      481 ksfkeleeki keinid
//
LOCUS       WP_235247521             196 aa            linear   BCT 02-MAR-2025
DEFINITION  PBECR4 domain-containing protein [Fusobacterium perfoetens].
ACCESSION   WP_235247521
VERSION     WP_235247521.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 196)
  AUTHORS   Iyer,L.M., Burroughs,A.M., Anand,S., de Souza,R.F. and Aravind,L.
  TITLE     Polyvalent Proteins, a Pervasive Theme in the Intergenomic
            Biological Conflicts of Bacteriophages and Conjugative Elements
  JOURNAL   J Bacteriol 199 (15), e00245-17 (2017)
   PUBMED   28559295
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037419.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18813.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..196
                     /product="PBECR4 domain-containing protein"
                     /calculated_mol_wt=23514
     Region          19..180
                     /region_name="PBECR4"
                     /note="phage-Barnase-EndoU-ColicinE5/D-RelE like
                     nuclease4; pfam18813"
                     /db_xref="CDD:436757"
ORIGIN      
        1 msinfkgitk kipfskinlk eflefykkei cdfnfkyile ddteiiidfr ernfshligl
       61 hkfkrikryk nseeinndiq kenitfynly santdffdkn relkdrityf pilktllenv
      121 dialkydlnv iwnskiefsf llrtdkvsil vylavkeise nkkicvpvsl lvdrndrfsk
      181 mklkeikvke initrk
//
LOCUS       WP_235247554             369 aa            linear   BCT 02-MAR-2025
DEFINITION  FRG domain-containing protein [Fusobacterium perfoetens].
ACCESSION   WP_235247554
VERSION     WP_235247554.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08867.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..369
                     /product="FRG domain-containing protein"
                     /calculated_mol_wt=43727
     Region          77..178
                     /region_name="FRG"
                     /note="FRG domain; cl07460"
                     /db_xref="CDD:447389"
ORIGIN      
        1 mkeisleilk knlyldeeqe kynleytkyr kenpdlskei llkgnrkdil seffnqgnin
       61 ghiipyphgk virygmknyy frgenalykk snsslnrvln qnncdniele kfksslkvih
      121 fskeldklkq vqewsifgdv fgyaiaqhyg latnliditd rlavalffat ciydkkseky
      181 rplceedikk epygylyikk nidfleldkl kiypigyqpf trcykqkgyf ivdpldknyd
      241 iqnegfeklk fkhsvefske ifskfksgde lfnydnskii knllkridns kefsikdfke
      301 afenykegls gnlseeeikn llfenkinlv deknflskde ienldkkwnl enllkeeelf
      361 vgsskiifr
//
LOCUS       WP_235247557             461 aa            linear   BCT 02-MAR-2025
DEFINITION  O-antigen polysaccharide polymerase Wzy [Fusobacterium perfoetens].
ACCESSION   WP_235247557
VERSION     WP_235247557.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 461)
  AUTHORS   Fratamico,P.M., Yan,X., Liu,Y., DebRoy,C., Byrne,B., Monaghan,A.,
            Fanning,S. and Bolton,D.
  TITLE     Escherichia coli serogroup O2 and O28ac O-antigen gene cluster
            sequences and detection of pathogenic E. coli O2 and O28ac by PCR
  JOURNAL   Can J Microbiol 56 (4), 308-316 (2010)
   PUBMED   20453897
REFERENCE   2  (residues 1 to 461)
  AUTHORS   Samuel,G. and Reeves,P.
  TITLE     Biosynthesis of O-antigens: genes and pathways involved in
            nucleotide sugar precursor synthesis and O-antigen assembly
  JOURNAL   Carbohydr Res 338 (23), 2503-2519 (2003)
   PUBMED   14670712
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025654.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14296.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     gene            1..461
                     /gene="wzy"
     Protein         1..461
                     /product="O-antigen polysaccharide polymerase Wzy"
                     /calculated_mol_wt=54250
     Region          15..447
                     /region_name="DUF4271"
                     /note="Domain of unknown function (DUF4271); cl40682"
                     /db_xref="CDD:454814"
ORIGIN      
        1 mknkikiinl ikinfilicl lfieffylyn nensynlffr kfldfqflsi lgfsllcgti
       61 lisffqpyni flgtffiflg grflldlfnl rdvmsmdrfi nfslkgieqi elfkviifai
      121 lfinlgflvg nflcsrtmki keykisnidf vlrkiyivff eiffflssyk kiilynfiek
      181 kgylalyrek itypfftkgs gtfseisyil flltkpskki fliisfqylf igflealsgs
      241 rgrfiirilv vityyfteye kkinyllisg itmfvitfsq yinqfrsgls fnlnklffsf
      301 fnqqgvsinv lgtiikfkne lkdviqfsil sftteegnti lngqsgvlsh slsyflspqr
      361 ylngegiggs flgevialds kiifiilmfm lgfiigilfl nrkkselnmg gyliilphiy
      421 ymsrdsyfpn ikylsfyflf iiihylihkk lenkfekrsf n
//
LOCUS       WP_235247576             462 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6630 family protein [Fusobacterium perfoetens].
ACCESSION   WP_235247576
VERSION     WP_235247576.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042484.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20335.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..462
                     /product="DUF6630 family protein"
                     /calculated_mol_wt=54443
     Region          <341..443
                     /region_name="DUF6630"
                     /note="Family of unknown function (DUF6630); pfam20335"
                     /db_xref="CDD:466485"
ORIGIN      
        1 merynlsaeh ivkllyrkki nrvtttpnse nffnspvftk vfgnnsannn ykiswedink
       61 teirlktnfp kvlrryyhec gdleinscfs silnldeigf shtwerealk ddgvsndeie
      121 kalektdnfl ifwtenqgvw nagikkedls lenppvymtt nddlyswekv tddidtfiil
      181 qvldnlqssg fyfltfdsee idsllldkki skdellknpf kikdrnikfp tysyydykgd
      241 kiyifqmkdd kfekcllikp svkkdetsya dkillkiagi lsandrkiik kleliledfr
      301 nylrkdmtlr yiddeintls dkekiklkki elkvvatill lsengyicyl dwkceledfq
      361 misevmkkig idenicnied lnldeddnie vwseefnkvf skkdifigni ntgsdsysif
      421 pinkenfkkl kelgnrigmk idflnyseee khmdknwqem sm
//
LOCUS       WP_235247253             255 aa            linear   BCT 02-MAR-2025
DEFINITION  phage antirepressor KilAC domain-containing protein [Fusobacterium
            perfoetens].
ACCESSION   WP_235247253
VERSION     WP_235247253.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 255)
  AUTHORS   Iyer,L.M., Koonin,E.V. and Aravind,L.
  TITLE     Extensive domain shuffling in transcription regulators of DNA
            viruses and implications for the origin of fungal APSES
            transcription factors
  JOURNAL   Genome Biol 3 (3), RESEARCH0012 (2002)
   PUBMED   11897024
REFERENCE   2  (residues 1 to 255)
  AUTHORS   Heinrich,J., Velleman,M. and Schuster,H.
  TITLE     The tripartite immunity system of phages P1 and P7
  JOURNAL   FEMS Microbiol Rev 17 (1-2), 121-126 (1995)
   PUBMED   7669337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015340.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03374.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..255
                     /product="phage antirepressor KilAC domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=29653
     Region          19..244
                     /region_name="KilAC"
                     /note="Phage antirepressor protein YoqD, KilAC domain
                     [Mobilome: prophages, transposons]; COG3645"
                     /db_xref="CDD:442862"
ORIGIN      
        1 mqnlevvinn vngqnvvnsr tiaeqlgkrh dhiirdleki letpnvgsli ipstykvngq
       61 nreykeyllt kdgftlymfn iqgyqefkma yinkfnemen iirqkiptsf kealklayeq
      121 qetienlqle nkvkdqqiae lqpkasyydv ilqckdllst tiiakdygma akgfnkllhe
      181 lgiqytqsgv wllyqkyadk gytqtktqny nrpdgtqgak phtywtqkgr lflyeflkah
      241 gylpiiekee seeek
//
LOCUS       WP_235247744             443 aa            linear   BCT 02-MAR-2025
DEFINITION  VanW family protein [Niallia circulans].
ACCESSION   WP_235247744
VERSION     WP_235247744.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 443)
  AUTHORS   Lu,J.J., Perng,C.L., Ho,M.F., Chiueh,T.S. and Lee,W.H.
  TITLE     High prevalence of VanB2 vancomycin-resistant Enterococcus faecium
            in Taiwan
  JOURNAL   J Clin Microbiol 39 (6), 2140-2145 (2001)
   PUBMED   11376048
REFERENCE   2  (residues 1 to 443)
  AUTHORS   McKessar,S.J., Berry,A.M., Bell,J.M., Turnidge,J.D. and Paton,J.C.
  TITLE     Genetic characterization of vanG, a novel vancomycin resistance
            locus of Enterococcus faecalis
  JOURNAL   Antimicrob Agents Chemother 44 (11), 3224-3228 (2000)
   PUBMED   11036060
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016202.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04294.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..443
                     /product="VanW family protein"
                     /calculated_mol_wt=50520
     Region          <198..375
                     /region_name="YoaR"
                     /note="Vancomycin resistance protein YoaR (function
                     unknown), contains peptidoglycan-binding and VanW domains
                     [Defense mechanisms]; COG2720"
                     /db_xref="CDD:442033"
ORIGIN      
        1 mdkktftlfi rlfiatfflf ggtslgvyaf qkadkeelyp intsvagiri gglteleakn
       61 mlenhligwk anaiyefqyk ektvqisndi fvfdveetlk nitensandf vvnvreevlq
      121 teleqynsfs medididlfk salleaasil qvdkkiavee yfasyvsgkd llntvemtvp
      181 dqieelenvi ptikeitilp kttfsllgll edvnqkgvkd etvsilatgi yqlvlqtnfd
      241 irertiskel pdyvdvgyea kasfrdqldl rftnpnehay iialkveenq lilqlkgqef
      301 pnhyeiviee keeyepktiv qfdsllegdq vkvkqegnng isvvvikevl dkngdqvkre
      361 siatdyyppi yrvevrglpn nkdieqtdsk edgeeapiee dlndpaiees tmdeennpnq
      421 eidqekeddd lndsidddqi iek
//
LOCUS       WP_235247639             119 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Fusobacterium perfoetens].
ACCESSION   WP_235247639
VERSION     WP_235247639.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium perfoetens
  ORGANISM  Fusobacterium perfoetens
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 119)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Fusobacterium perfoetens"
                     /db_xref="taxon:852"
     Protein         1..>119
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>119
                     /region_name="TufA"
                     /note="Translation elongation factor EF-Tu, a GTPase
                     [Translation, ribosomal structure and biogenesis];
                     COG0050"
                     /db_xref="CDD:439820"
ORIGIN      
        1 makekfdrsk phvnigtigh vdhgktttta aiskvlsdrg laekvdfdki dvapeererg
       61 itintahiey ttekrhyahv dcpghadyvk nmitgaaqmd gailvvsaad gpmpqtreh
//
LOCUS       WP_235247773             249 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: polysaccharide deacetylase family protein [Niallia].
ACCESSION   WP_235247773
VERSION     WP_235247773.1
KEYWORDS    RefSeq.
SOURCE      Niallia
  ORGANISM  Niallia
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 249)
  AUTHORS   Freiberg,C., Fellay,R., Bairoch,A., Broughton,W.J., Rosenthal,A.
            and Perret,X.
  TITLE     Molecular basis of symbiosis between Rhizobium and legumes
  JOURNAL   Nature 387 (6631), 394-401 (1997)
   PUBMED   9163424
REFERENCE   2  (residues 1 to 249)
  AUTHORS   Mishra,C., Semino,C.E., McCreath,K.J., de la Vega,H., Jones,B.J.,
            Specht,C.A. and Robbins,P.W.
  TITLE     Cloning and expression of two chitin deacetylase genes of
            Saccharomyces cerevisiae
  JOURNAL   Yeast 13 (4), 327-336 (1997)
   PUBMED   9133736
REFERENCE   3  (residues 1 to 249)
  AUTHORS   Millward-Sadler,S.J., Poole,D.M., Henrissat,B., Hazlewood,G.P.,
            Clarke,J.H. and Gilbert,H.J.
  TITLE     Evidence for a general role for high-affinity non-catalytic
            cellulose binding domains in microbial plant cell wall hydrolases
  JOURNAL   Mol Microbiol 11 (2), 375-382 (1994)
   PUBMED   8170399
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013672.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01522.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Niallia"
                     /db_xref="taxon:2837506"
     Protein         1..249
                     /product="polysaccharide deacetylase family protein"
                     /GO_function="GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=29182
     Region          76..243
                     /region_name="CE4_SF"
                     /note="Catalytic NodB homology domain of the carbohydrate
                     esterase 4 superfamily; cl15692"
                     /db_xref="CDD:472828"
ORIGIN      
        1 mtfpvlmyhe irkeedfhat eqhpidvkqn ykdflpsplf itlekfeqqm eylfingfhp
       61 ltlnevkayy eggplpeksv lltfddcfqs ikeyaypilk kyqfhatafv vtgwlhdskr
      121 qfekeksvcl sindlkemad vfeyanhthc mhvrtsetes llmtsskedf akdldecnnh
      181 sliehknvfa ypfglfnesn vltlrekafk laftcenghn drkndplllk rnaipylmdl
      241 etfkkiitn
//
LOCUS       WP_235247800              92 aa            linear   BCT 02-MAR-2025
DEFINITION  type II toxin-antitoxin system HicB family antitoxin [Faecalicatena
            contorta].
ACCESSION   WP_235247800
VERSION     WP_235247800.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 92)
  AUTHORS   Winter,A.J., Williams,C., Isupov,M.N., Crocker,H., Gromova,M.,
            Marsh,P., Wilkinson,O.J., Dillingham,M.S., Harmer,N.J.,
            Titball,R.W. and Crump,M.P.
  TITLE     The molecular basis of protein toxin HicA-dependent binding of the
            protein antitoxin HicB to DNA
  JOURNAL   J Biol Chem 293 (50), 19429-19440 (2018)
   PUBMED   30337369
REFERENCE   2  (residues 1 to 92)
  AUTHORS   Hall,A.M., Gollan,B. and Helaine,S.
  TITLE     Toxin-antitoxin systems: reversible toxicity
  JOURNAL   Curr Opin Microbiol 36, 102-110 (2017)
   PUBMED   28279904
REFERENCE   3  (residues 1 to 92)
  AUTHORS   Bibi-Triki,S., Li de la Sierra-Gallay,I., Lazar,N., Leroy,A., Van
            Tilbeurgh,H., Sebbane,F. and Pradel,E.
  TITLE     Functional and structural analysis of HicA3-HicB3, a novel
            toxin-antitoxin system of Yersinia pestis
  JOURNAL   J Bacteriol 196 (21), 3712-3723 (2014)
   PUBMED   25112480
REFERENCE   4  (residues 1 to 92)
  AUTHORS   Makarova,K.S., Grishin,N.V. and Koonin,E.V.
  TITLE     The HicAB cassette, a putative novel, RNA-targeting toxin-antitoxin
            system in archaea and bacteria
  JOURNAL   Bioinformatics 22 (21), 2581-2584 (2006)
   PUBMED   16895922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10003996
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..92
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /GO_component="GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA]"
                     /calculated_mol_wt=10611
     Region          5..69
                     /region_name="HicB"
                     /note="Antitoxin component HicB of the HicAB
                     toxin-antitoxin system [Defense mechanisms]; COG1598"
                     /db_xref="CDD:441206"
ORIGIN      
        1 mkfiypavfh ktengryegy fpdleccyge getlddaids andamrdwit lelseeeplm
       61 pyvsdisdmn lkegeivrni svnirfyegw de
//
LOCUS       WP_235247874             304 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Faecalicatena
            contorta].
ACCESSION   WP_235247874
VERSION     WP_235247874.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..304
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=34138
     Region          5..300
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(10,12..13,15,35..37,72..74,113..115,140,144,
                     167..170)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187574"
     Site            order(92,115,140,144)
                     /site_type="active"
                     /db_xref="CDD:187574"
ORIGIN      
        1 meskkvliig gngfigrnla kklimrkdle vysfdlsipq etvegveyls gdffddhvlk
       61 nairgmdmvi hslstvnpgn snekymqgyg rdllqtvklc gmlidqgtnm iflssggtvy
      121 giqekqpine lalpvpinhy gsvklcieni irtfnsqlht kmriarisnp ygpgqdyhkg
      181 vgfvdaavkk mihketleiw gdgetirdyi yiedvcsmle alidyegdee vfnissnegi
      241 sqnmvveilr klnggldviy kearsvdvkk ivldnskirs iyqgeirsfa egleqyykfl
      301 vege
//
LOCUS       WP_235247893             508 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: N-acetylmuramoyl-L-alanine amidase [Niallia].
ACCESSION   WP_235247893
VERSION     WP_235247893.1
KEYWORDS    RefSeq.
SOURCE      Niallia
  ORGANISM  Niallia
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 508)
  AUTHORS   Kuroda,A., Sugimoto,Y., Funahashi,T. and Sekiguchi,J.
  TITLE     Genetic structure, isolation and characterization of a Bacillus
            licheniformis cell wall hydrolase
  JOURNAL   Mol Gen Genet 234 (1), 129-137 (1992)
   PUBMED   1495475
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013670.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01520.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Niallia"
                     /db_xref="taxon:2837506"
     Protein         1..508
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /EC_number="3.5.1.28"
                     /GO_function="GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=56311
     Region          21..157
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          104..235
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          183..308
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          312..507
                     /region_name="AmiC"
                     /note="N-acetylmuramoyl-L-alanine amidase [Cell
                     wall/membrane/envelope biogenesis]; COG0860"
                     /db_xref="CDD:440621"
ORIGIN      
        1 mkwmlfllvn iffipthqlv saenqltvqa ntvvnvrenp gldqtvigkm eigkaypllk
       61 eekdwieiqy tssstgwvaa ylvtksgqnt dngtiemeqs tsistkatit englrlrkgp
      121 gtnyqvittl gkgievtvls tsgdwyqikt slgsgwvhnd ylqfgksesq sstieeteds
      181 nlqsatvied qvnlrsnpst nadiigkisi dtvitiieee tewakiqysg nigwvhkdll
      241 esgdiesrkg qktdktikll ydrtnirsda tvnskvllia dsgatfqtve vlddwykikl
      301 sngefgyiae wivediates edanegnstd lkgktivldp ghggkdsgti gvigtlekdl
      361 nlrtakllan kleasganvi ltrkddifis lqsrvdishf yhadafislh ydsindssvn
      421 gvtsyyytsn qkklatslhk siidatnrkd rgvrkneyvv lkqnrqaasl lelgylsnpa
      481 eeqtmlssky qetistaiyh glenyfsy
//
LOCUS       WP_235247898             213 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF1510 family protein [Bacillaceae].
ACCESSION   WP_235247898
VERSION     WP_235247898.1
KEYWORDS    RefSeq.
SOURCE      Bacillaceae
  ORGANISM  Bacillaceae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07423.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Bacillaceae"
                     /db_xref="taxon:186817"
     Protein         1..213
                     /product="DUF1510 family protein"
                     /calculated_mol_wt=23556
     Region          <9..48
                     /region_name="PHA03164"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:177547"
     Region          115..206
                     /region_name="DUF1510"
                     /note="Domain of unknown function (DUF1510); pfam07423"
                     /db_xref="CDD:429456"
ORIGIN      
        1 mskeinnens tryqqrskrk ktnlilngli iavilligfv sysifhtnde nnadkkqssg
       61 tntgqeatnd etakttesde atneedtqvd eeaaesenge mvteggsdsn vvktienssw
      121 epvgttqtge hvasysegvd wkeqvkalsy atgldsnnmt vwflgnnnkd pqksigtvss
      181 kdqsekyrvy iewvdgsgwk ptkveeikdl nir
//
LOCUS       WP_235248024             340 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidyl-prolyl cis-trans isomerase [Faecalicatena contorta].
ACCESSION   WP_235248024
VERSION     WP_235248024.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024545.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13145.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..340
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /GO_function="GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /calculated_mol_wt=37829
     Region          3..313
                     /region_name="prsA"
                     /note="peptidylprolyl isomerase; Provisional; PRK00059"
                     /db_xref="CDD:234605"
ORIGIN      
        1 mkkkvltlal tgmlavtslt gcgslkeddv vatvgdqkit agvanfyary tqamyetyya
       61 aymggddmwt tevedgktye esikesvlee letmivlekn mdaydvtlsd eektaienaa
      121 ktfdeaneda dkekvsgske tvervmtlmt ienkmrnaiq aevdtevsde eaaqksmeyv
      181 efsylaedgq telsddekas vkeqaeafae gaktaedfdt yvtdqgyeaq tatfdsests
      241 patevieaad qmaegdvsdi ietdsacyvv kltslldrda tdqkkesiis erqtelfndt
      301 ctelkekeei kvnknvwkkv dfqklsvtfr qeesettted
//
LOCUS       WP_235248034             193 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: 5' nucleotidase, NT5C type [Bacillaceae].
ACCESSION   WP_235248034
VERSION     WP_235248034.1
KEYWORDS    RefSeq.
SOURCE      Bacillaceae
  ORGANISM  Bacillaceae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales.
REFERENCE   1  (residues 1 to 193)
  AUTHORS   Rampazzo,C., Kost-Alimova,M., Ruzzenente,B., Dumanski,J.P. and
            Bianchi,V.
  TITLE     Mouse cytosolic and mitochondrial deoxyribonucleotidases: cDNA
            cloning of the mitochondrial enzyme, gene structures, chromosomal
            mapping and comparison with the human orthologs
  JOURNAL   Gene 294 (1-2), 109-117 (2002)
   PUBMED   12234672
REFERENCE   2  (residues 1 to 193)
  AUTHORS   Rampazzo,C., Johansson,M., Gallinaro,L., Ferraro,P., Hellman,U.,
            Karlsson,A., Reichard,P. and Bianchi,V.
  TITLE     Mammalian 5'(3')-deoxyribonucleotidase, cDNA cloning, and
            overexpression of the enzyme in Escherichia coli and mammalian
            cells
  JOURNAL   J Biol Chem 275 (8), 5409-5415 (2000)
   PUBMED   10681516
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018627.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06941.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Bacillaceae"
                     /db_xref="taxon:186817"
     Protein         1..193
                     /product="5' nucleotidase, NT5C type"
                     /GO_function="GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009264 - deoxyribonucleotide catabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=22294
     Region          4..190
                     /region_name="YqfW"
                     /note="Uncharacterized conserved protein YqfW, HAD
                     superfamily [General function prediction only]; COG5663"
                     /db_xref="CDD:444382"
ORIGIN      
        1 mkkmrfgidi dgtvtspatf vpflnesfql nitledvvqy efyplvnvtn eefdkwflen
       61 eariyssspl aegasvvlqk wakqhelifi sargegmlel tkqwfesngi sfdhieligs
      121 hhkiaaakrn mvdiffedkh dnavmlheel gipvilfdtp ynrkpipkgv krvttwneay
      181 ewveewvktq vnq
//
LOCUS       WP_235248177             182 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5662 family protein [Faecalicatena contorta].
ACCESSION   WP_235248177
VERSION     WP_235248177.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039820.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18907.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..182
                     /product="DUF5662 family protein"
                     /calculated_mol_wt=21452
     Region          2..158
                     /region_name="DUF5662"
                     /note="Family of unknown function (DUF5662); pfam18907"
                     /db_xref="CDD:436821"
ORIGIN      
        1 mkawqhlrti nhhkylvmkh cfkvglyrqg llhdlskysp teflvgckyy qgnrspnnae
       61 reatgyskaw lhhkgrnkhh yeywidysvn peegivgqkm ptryviemfm drvaasktyq
      121 gdrykdchpl eyykqgaakl gkmihpetaa llhkllkmla eegeektffy irknilknlk
      181 nl
//
LOCUS       WP_235248271             749 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Faecalicatena
            contorta].
ACCESSION   WP_235248271
VERSION     WP_235248271.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 749)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 749)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 749)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 749)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..749
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=83536
     Region          3..748
                     /region_name="UvrA"
                     /note="Excinuclease UvrABC ATPase subunit [Replication,
                     recombination and repair]; COG0178"
                     /db_xref="CDD:439948"
ORIGIN      
        1 mkmktdriii rglkqnnlkn isleipknqi vvftgvsgsg kssivfdtia aesqrqmnet
       61 ytawvrgrlp kyekpnveyi dnlnpsvvid qsrlggnars tvgtisdmya slrllfsrig
      121 ephigpasyf sfnnpngmck tcagigkime ldihklidee ktyeegifhl pafgpgkyyw
      181 klyrrpdlfd vhkkwkdlse eeqnillygs rtkdgerldk kiegvynqfk rlclmkgpee
      241 qsdhtlkkin qymdeivcpd ckgarlnpea lscrihgyhi mdmcemefsr lyeelkkitd
      301 praqsivrsl tealgrmidi glpylsmnre sstlsggeaq rlklvrymgs sltgmiyifd
      361 epstgmhprd vhrmirlles lrdkgntvlv vehdrdiiri adqvidvgpl agkgggqilf
      421 qgsyenllls gtrtgdamke kipvkevpek ptgwlqvrda avhnlkhvnv diplgvltvv
      481 tgvagsgkss lirdvfakey edrvvlvdqs aitatgrsta ctylgffdei rkvyaracqk
      541 daglfsfnsk gacpackgrg tittelvfmd pvttvcescg gkryseealq ckyqgksive
      601 vldmsvedaa effrdntkir khleallevg lpylslgqpl stlsggerqr vklakelrgk
      661 ghiyvldept tglhasdirt lmelfesmir hgntvivieh ntdvmkmady iidigpdggt
      721 hggkvvftgt plemlsnght itakylaes
//
LOCUS       WP_235248371             376 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF362 domain-containing protein [Faecalicatena contorta].
ACCESSION   WP_235248371
VERSION     WP_235248371.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015948.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04015.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..376
                     /product="DUF362 domain-containing protein"
                     /calculated_mol_wt=41109
     Region          42..315
                     /region_name="DUF362"
                     /note="Domain of unknown function (DUF362); pfam04015"
                     /db_xref="CDD:461131"
     Region          185..261
                     /region_name="COG2768"
                     /note="Uncharacterized Fe-S cluster protein [Function
                     unknown]"
                     /db_xref="CDD:442050"
ORIGIN      
        1 mekakvyytd frtklgeglp tklkrlikaa gieqidmdgk fvaikmhfge lgnlgflrpn
       61 yaravvdvve elggkpfltd cntlypgsrk nalehlycaw engftpltvg cpiiigdglk
      121 gtddievpvn ggeyiqnaki gravmdadif islthfkghe ttgfggtikn igmgcgsrag
      181 kkdqhmngkp gidqelcrgc krclkecanq gldyneetrk msinkekcvg cgrcigacnf
      241 daiefsdsaa tkelncrmae ytkavvdgrp nfhislivdv spncdchsen dapilpnigm
      301 fasfdplald qacadaclsa tplpnsqlse amekeefcdh hdhfenttpn seyktclaha
      361 ekiglgtrey eiitir
//
LOCUS       WP_235248441             260 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: serine hydrolase [Bacillaceae].
ACCESSION   WP_235248441
VERSION     WP_235248441.1
KEYWORDS    RefSeq.
SOURCE      Bacillaceae
  ORGANISM  Bacillaceae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales.
REFERENCE   1  (residues 1 to 260)
  AUTHORS   Urbach,C., Evrard,C., Pudzaitis,V., Fastrez,J., Soumillion,P. and
            Declercq,J.P.
  TITLE     Structure of PBP-A from Thermosynechococcus elongatus, a
            penicillin-binding protein closely related to class A
            beta-lactamases
  JOURNAL   J Mol Biol 386 (1), 109-120 (2009)
   PUBMED   19100272
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024748.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13354.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Bacillaceae"
                     /db_xref="taxon:186817"
     Protein         1..260
                     /product="serine hydrolase"
                     /GO_function="GO:0008800 - beta-lactamase activity
                     [Evidence IEA]"
                     /GO_process="GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=29335
     Region          2..253
                     /region_name="PenP"
                     /note="Beta-lactamase class A [Defense mechanisms];
                     COG2367"
                     /db_xref="CDD:441934"
ORIGIN      
        1 mdierlsksi nkiaqehrgq ghlgiaiewk gqffflnerd vfpsaslikl pimiegfmqs
       61 lsgtleldel irvdnirkag gagivqyisp qsylsigdll tsmiivsdnm atnylierlg
      121 lesinsrcqq lgmsntvlqr kmmdqqarer kldnytspld iirclkaiqn dknqsakril
      181 snqqlldklp yylgenrsir ianktgeldk vehdcaiiey edeiiyvavl tdqlptnqkg
      241 keiiqligas ifecisdkkv
//
LOCUS       WP_235248475             623 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: FAD-dependent oxidoreductase [Niallia].
ACCESSION   WP_235248475
VERSION     WP_235248475.1
KEYWORDS    RefSeq.
SOURCE      Niallia
  ORGANISM  Niallia
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 623)
  AUTHORS   Mande,S.S., Sarfaty,S., Allen,M.D., Perham,R.N. and Hol,W.G.
  TITLE     Protein-protein interactions in the pyruvate dehydrogenase
            multienzyme complex: dihydrolipoamide dehydrogenase complexed with
            the binding domain of dihydrolipoamide acetyltransferase
  JOURNAL   Structure 4 (3), 277-286 (1996)
   PUBMED   8805537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07992.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Niallia"
                     /db_xref="taxon:2837506"
     Protein         1..623
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=70307
     Region          3..389
                     /region_name="Ndh"
                     /note="NADH dehydrogenase, FAD-containing subunit [Energy
                     production and conversion]; COG1252"
                     /db_xref="CDD:440864"
     Region          <514..599
                     /region_name="DoxX"
                     /note="Uncharacterized membrane protein YphA, DoxX/SURF4
                     family [Function unknown]; COG2259"
                     /db_xref="CDD:441860"
ORIGIN      
        1 mdkkniviig agyagvhaak klakkykkdd svsitlidrh syhtmmtelh evaahrvepd
       61 aiqfdlrrlf nrtkvklvtd nvkhvdyqsk lvttehgqfs fdylilgmgg epndfgtpgv
      121 qengftlwsw edavrlrehi ekivrkaanv hdeatrkaml tftvcgsgft giemvgelie
      181 wkerlakdyk ldaeditlyv veaaptilnm lerrdadkae sylvkqgvki lksspivevk
      241 edaivlksge elptytliwt agvransdtk dygmsagrag rlkvnahmes edykdvyvvg
      301 dlayfeeepg kptpqiveaa eqtaltaakn iiaeisggek eaykgkyhgv mvsigarygv
      361 anlsgmhlsg wfanfmkhmv nlyyffgigs gyymyqyvmh effhtkdkrn ifrdfltryg
      421 nvlwslplrv fvagfwiiea caklwgestw kdsisswskv pnlfnglged swltatsvkm
      481 pfewlqtats gaseaatstd fatpilskmp fwfewimkim lptpevalfm qkmmifiela
      541 iglailaglf twlanaasaa flvmftltam lgwdkvwalp asialmngsg rtfgldywvi
      601 pflqrklgdw wygkeraiyk dyk
//
LOCUS       WP_235248498             354 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaJ C-terminal domain-containing protein [Faecalicatena contorta].
ACCESSION   WP_235248498
VERSION     WP_235248498.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 354)
  AUTHORS   Silva,J.C., Borges,J.C., Cyr,D.M., Ramos,C.H. and Torriani,I.L.
  TITLE     Central domain deletions affect the SAXS solution structure and
            function of yeast Hsp40 proteins Sis1 and Ydj1
  JOURNAL   BMC Struct Biol 11, 40 (2011)
   PUBMED   22011374
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 354)
  AUTHORS   Li,J., Qian,X. and Sha,B.
  TITLE     The crystal structure of the yeast Hsp40 Ydj1 complexed with its
            peptide substrate
  JOURNAL   Structure 11 (12), 1475-1483 (2003)
   PUBMED   14656432
REFERENCE   3  (residues 1 to 354)
  AUTHORS   Kelley,W.L.
  TITLE     The J-domain family and the recruitment of chaperone power
  JOURNAL   Trends Biochem Sci 23 (6), 222-227 (1998)
   PUBMED   9644977
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013705.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01556.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..354
                     /product="DnaJ C-terminal domain-containing protein"
                     /calculated_mol_wt=38464
     Region          6..345
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
ORIGIN      
        1 mvrkrdyyev lgvsrdadet vikkayrkia kkyhpdtntd neqaaekfke ateaytiltd
       61 pekrklydry ghaafdagag gagtygdaga ygyrengrtg ayrytgpdgt yheyhfeggd
      121 mddilknffg kdfsrggfkn yshnnggfee sdfgnngygn ggfhrqgfrq ngsdlqaeis
      181 vsfdeavfgc ekvvnlsges frngtgkalk vhipagidtg ksirlrgkgm pgtgggkpgd
      241 lllkvtvgsr pgyerkgqdv yttinipfsv avlggeaivp tlygnvmcki kpgtqsgtri
      301 rlkgkgivsm knpnergdqy vtvqiqvpkn lseeakkklr efekacsgsa kgva
//
LOCUS       WP_235248528             315 aa            linear   BCT 02-MAR-2025
DEFINITION  FHA domain-containing protein [Faecalicatena contorta].
ACCESSION   WP_235248528
VERSION     WP_235248528.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 315)
  AUTHORS   Pallen,M., Chaudhuri,R. and Khan,A.
  TITLE     Bacterial FHA domains: neglected players in the phospho-threonine
            signalling game?
  JOURNAL   Trends Microbiol 10 (12), 556-563 (2002)
   PUBMED   12564991
REFERENCE   2  (residues 1 to 315)
  AUTHORS   Durocher,D., Henckel,J., Fersht,A.R. and Jackson,S.P.
  TITLE     The FHA domain is a modular phosphopeptide recognition motif
  JOURNAL   Mol Cell 4 (3), 387-394 (1999)
   PUBMED   10518219
REFERENCE   3  (residues 1 to 315)
  AUTHORS   Hofmann,K. and Bucher,P.
  TITLE     The FHA domain: a putative nuclear signalling domain found in
            protein kinases and transcription factors
  JOURNAL   Trends Biochem Sci 20 (9), 347-349 (1995)
   PUBMED   7482699
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012708.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00498.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..315
                     /product="FHA domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=36088
     Region          20..>128
                     /region_name="DUF6382"
                     /note="Domain of unknown function (DUF6382); pfam19909"
                     /db_xref="CDD:466230"
     Region          219..314
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cd00060"
                     /db_xref="CDD:438714"
     Site            order(243..244,260..261,263,282..283)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:438714"
ORIGIN      
        1 mktifdeglv qksegenyvs yllrseenfs ptgykmmlsg acrgilkctk vmfngwpkfv
       61 yitdqyrrmd rilasisead flqiagnivs vilelrentl lkcssmdltv dhifvdyktk
      121 eiyliylpvv stqiemeeye fdqllrtrll ewsriftkvp gdrlqyfqnk lqdpncslke
      181 iasqfrdega gyaiksksse eetdekeqpk teeaekltkl vlqsaqrekk lefiisqdey
      241 llgrsvyrad gqisgnmrvg nvhckivrng snyyvmdlqs rngtflngvq lrpgaaclln
      301 sgdilklade sfrvl
//
LOCUS       WP_235248550              82 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4315 family protein [Faecalicatena contorta].
ACCESSION   WP_235248550
VERSION     WP_235248550.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025556.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14193.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..82
                     /product="DUF4315 family protein"
                     /calculated_mol_wt=9618
     Region          3..79
                     /region_name="DUF4315"
                     /note="Domain of unknown function (DUF4315); pfam14193"
                     /db_xref="CDD:433763"
ORIGIN      
        1 mnierikael sktyakierl qnrareleeq kkqaedmeyl kiirkngisa eelqllidis
       61 neeqkqilet rekeqtgnee ns
//
LOCUS       WP_235248555             685 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Niallia circulans].
ACCESSION   WP_235248555
VERSION     WP_235248555.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 685)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..685
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=78403
     Region          24..>203
                     /region_name="RpfG"
                     /note="Response regulator c-di-GMP phosphodiesterase, RpfG
                     family, contains REC and HD-GYP domains [Signal
                     transduction mechanisms]; COG3437"
                     /db_xref="CDD:442663"
     Region          166..685
                     /region_name="KinE"
                     /note="Sporulation sensor histidine kinase E [Cell cycle
                     control, cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG5809"
                     /db_xref="CDD:444511"
ORIGIN      
        1 mqysaqsieq kknlsasvse piyilmvddl qenllaleav lnnsqyhlvf aksgeealkf
       61 iltydfavil ldvqmpglng fetakliker kksrhipiif itaisqdmqh imqgyqvgai
      121 dyivkpfnpe alkskvaqfv qiyeshtksl hemnwqttse lekmnkelri tkmdltknav
      181 fssilqkalq dtivtfdeeg tiisvnpsvr rmfgyveedl igssievllh siesevsiet
      241 pitfdmlvpn figrmieaka krknnivfpv dlyigdamve dyqlfvctir diserkever
      301 lrkqqvdqle haveertlel lsmnhklhre reekskvtdd lmlsegrfrq ifeaspclma
      361 irsmeepafi avnknwvkst gytmeelkqd gyhwkifkdv ngieenfhee dwhfplknqr
      421 viftikngeq kqgllsteii tiknnncvli vlnditerla lekemarldq lnlvgemaag
      481 iaheirnpmt tvhgflqigk snpsnlsleh melmideldr ankiikeflt laknktsdkr
      541 ryslnriiei iyplinaeal ltgkkvnlql gvcpelylde keirqlllnl alngleamet
      601 egiltirtfc kgkhfvleii dsgngideei lkklgtpfft tkdngtglgl avcyriaerh
      661 marinvqtse ngtkfsvyfe ieqgk
//
LOCUS       WP_235248598             384 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme [Faecalicatena
            contorta].
ACCESSION   WP_235248598
VERSION     WP_235248598.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..384
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /calculated_mol_wt=42061
     Region          5..381
                     /region_name="am_tr_V_EF2568"
                     /note="cysteine desulfurase family protein; TIGR01977"
                     /db_xref="CDD:131032"
ORIGIN      
        1 mgkriyfdng stswpkapkv aeamaglleq gayninrgny egayeveglv letrmqlarl
       61 fhsadsrrvi ftpgithsln yfikgylksg dhvlvtgmeh navmrplkqm egrgvsydmv
      121 rtagdgtvlp edverairpe travimlhas nvcgtivpir eigeicerhh lffavdtaqs
      181 agtidvdmqa chidflaftg hkgllgpqgi ggfliseald aemtpyiagg tgsqsdsldm
      241 pdylpdkyes gtlnlpgiig lhaalsylee tgirtihqkk maltqyfler vqelpgiria
      301 gkqgirdrva vvsldfeead navvafeleq qygimtrvgl hcapmahkal htypqgtvrf
      361 afgaantree ieccmegire ilgi
//
LOCUS       WP_235248584             224 aa            linear   BCT 02-MAR-2025
DEFINITION  winged helix-turn-helix domain-containing protein [Faecalicatena
            contorta].
ACCESSION   WP_235248584
VERSION     WP_235248584.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Wietzorrek,A. and Bibb,M.
  TITLE     A novel family of proteins that regulates antibiotic production in
            streptomycetes appears to contain an OmpR-like DNA-binding fold
  JOURNAL   Mol Microbiol 25 (6), 1181-1184 (1997)
   PUBMED   9350875
REFERENCE   2  (residues 1 to 224)
  AUTHORS   Martinez-Hackert,E. and Stock,A.M.
  TITLE     The DNA-binding domain of OmpR: crystal structures of a winged
            helix transcription factor
  JOURNAL   Structure 5 (1), 109-124 (1997)
   PUBMED   9016718
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012698.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00486.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..224
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=25038
     Region          2..223
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(96..99,101)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381133"
ORIGIN      
        1 mifcveddsn irelvvytle stgfkargye dgssflkala letpelilld imlpgedgme
       61 llkklkaspk trdipvimvt akgaeydkvk gldsgaddyv tkpfgmmelv srikavlrrs
      121 ssmnarsedt ivlgdieint kkhevtaage vvnltlkeye llkrlmknsn ivltrdqlle
      181 diwgydfdge trtvdvhvrt lrqklgksge rietvrgvgy rmse
//
LOCUS       WP_235248608             247 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6882 domain-containing protein [Faecalicatena contorta].
ACCESSION   WP_235248608
VERSION     WP_235248608.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF044878.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21813.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..247
                     /product="DUF6882 domain-containing protein"
                     /calculated_mol_wt=28403
ORIGIN      
        1 mvdmgifdkl kkskkqleit gmdvidksdw lkvfssclgk mmaiqnhagk yvvkgqnwnv
       61 dfttgtiafg edrfpiqlig tesntshtwm wgwnnvnrlp edlialpkem lnkgeewnld
      121 plrlskfeln difnghnmsv aacglsdrny fyyraphkdg aiflavdnap eevfapvdmd
      181 efinltveca qqflplhhki fvesflkwnq vdfdfekdri iahfqqdlhi ifeqssgeyr
      241 idslsvv
//
LOCUS       WP_235248615             495 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Faecalicatena contorta].
ACCESSION   WP_235248615
VERSION     WP_235248615.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 495)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 495)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012234.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00004.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..495
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=55325
     Region          232..409
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            order(278..280,296,298..299,340..341)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410908"
ORIGIN      
        1 mtvfdfnstp dnkkepecty tvfytdesmt speqpilvld nkgknfehhs ggmftnpvkr
       61 tafefkeeng tvsadilkld arfvsllkwl genhinvrls ganredgyav ykiremafgg
      121 geklsaedgf lqfmierlls snapaeeets dedteetgds mkltsiqsit dfmncagrtl
      181 pdnirlwarr nlavarsnev speerrhaqr alsmmmniqw knhyfeaidp eearrildee
      241 lygmervkqr iietiiqinr thtlpaygll ligpagtgks qiayavaril klpwttldms
      301 sindpeqltg ssriyanakp giimdafsma gesnlvfiin eldkaasgkg ngnpadvllt
      361 lldnlgftdn yiecmiptvg vypiatanek dqisaplmsr favieipdyt meekkvifsk
      421 yalpkvlkri gmregecvlt egaldevlli hkntsgirdl eqaaehiaan alyqievnhv
      481 dsvtfnskmi rella
//
LOCUS       WP_235248701              45 aa            linear   BCT 02-MAR-2025
DEFINITION  FeoB-associated Cys-rich membrane protein [Faecalicatena contorta].
ACCESSION   WP_235248701
VERSION     WP_235248701.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12669.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..45
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..45
                     /product="FeoB-associated Cys-rich membrane protein"
                     /calculated_mol_wt=4551
ORIGIN      
        1 mgtvvvllvl vgvvglavrs mikdkkagks lqcgcdckhc sghch
//
LOCUS       WP_235248771             434 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Faecalicatena contorta].
ACCESSION   WP_235248771
VERSION     WP_235248771.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024911.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13521.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..434
                     /product="AAA family ATPase"
                     /calculated_mol_wt=49548
     Region          5..71
                     /region_name="HipB"
                     /note="Transcriptional regulator, contains XRE-family HTH
                     domain [Transcription]; COG1396"
                     /db_xref="CDD:441006"
     Region          78..259
                     /region_name="AAA_28"
                     /note="AAA domain; pfam13521"
                     /db_xref="CDD:433278"
     Region          278..433
                     /region_name="CYTH"
                     /note="CYTH domain, found in class IV adenylate cyclase
                     and various triphosphatases [General function prediction
                     only]; COG2954"
                     /db_xref="CDD:442195"
ORIGIN      
        1 mndysfgkyi fekrkqsgds qnelgrklgv tgkaiskwen gsakpkvqii rkmaalwgis
       61 veellkaked dkkmnitkiv itggpcagkt tgmswiqnaf tergytvlfv petatelisg
      121 gvapwtcssn seyqkcqmkl qqekervfey aartmdseki livcdrgald nkaymteaef
      181 avalnyldan evelrdnyda vfhlvtaakg aqkfyttann aartetveea aalddkliaa
      241 wtghphlrii dnsvgfeekm khliaeianf lgepepyeie rkylieypdi kalevlpnck
      301 kveiiqtylk spegdeirir qrgskgnyiy fetrkktisg lkrveverrl tkdeylerlm
      361 dadptrkpir kdrycladgn qyfeidvypf wtdqaimeie lsnpneeirf pdiikvlrev
      421 tedeqyknas laki
//
LOCUS       WP_235248781             836 aa            linear   BCT 02-MAR-2025
DEFINITION  YfhO family protein [Faecalicatena contorta].
ACCESSION   WP_235248781
VERSION     WP_235248781.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 836)
  AUTHORS   Serizawa,M., Kodama,K., Yamamoto,H., Kobayashi,K., Ogasawara,N. and
            Sekiguchi,J.
  TITLE     Functional analysis of the YvrGHb two-component system of Bacillus
            subtilis: identification of the regulated genes by DNA microarray
            and northern blot analyses
  JOURNAL   Biosci Biotechnol Biochem 69 (11), 2155-2169 (2005)
   PUBMED   16306698
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09586.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..836
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..836
                     /product="YfhO family protein"
                     /calculated_mol_wt=96350
     Region          1..836
                     /region_name="YfhO"
                     /note="Uncharacterized membrane protein YfhO [Function
                     unknown]; COG4485"
                     /db_xref="CDD:443579"
ORIGIN      
        1 mekkiktklp yiilalltlf fcwlfcirng vfgskvdwis qhsvlpeyfr qlfydtgqlf
       61 pefaaniggg qniynfsyyg lyspvvlisy llpgvemgty lmaammihlv iavllcyrwl
      121 lhrgishyis ffvsvlflls gpmiyhsynq imfvnympfl cmaligvdry fekrragvyt
      181 lgvwmmilts fyfsvggmlv lvlygisryv eskeisqeri rlrtflwdgi qflfpvliav
      241 lmsavllvpt acvlmngrtg gtpvsfwklf ipdiqifrvv yapcgigltt lvitvlisgl
      301 tyrkknerwl higciiilsv plfawllngg lyvrdkvmip flpllcylma kymekqrkge
      361 ipfltglfpf lftilligik keqignkeyw illlidatim avcflicywk kcmqflilpp
      421 liflavygvm lhknadmlid pafyeqvtdn ntqttieeia kqeqglyrle qsgtvtedaa
      481 ninriwsvdq yvssvyssvy heayqdfrte ifqteqpyrn mfmqsspknp ifqrvmgiky
      541 iisdkdvpgy ekiaenvyen kdvlpiayvt krliseeeyr klefpynqla llecavvede
      601 tektvdkedw saglqklnll fenkkiqsqe svdhtveipe anvgdlfflq fkvnnhcpsk
      661 dvsiwvegir nkltanthly yneneeftya iplkegqtki dikfgagdye ithlnsyiwk
      721 ettledqrne lvqsefqpdq egtkgniikg tvegdkegyl itsipydenf eilidgketa
      781 yekantaflg mkmqkgkhei emiyhapgvm tgkilsmiga vmfillmvck enktki
//
LOCUS       WP_235248855             295 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5685 family protein [Faecalicatena contorta].
ACCESSION   WP_235248855
VERSION     WP_235248855.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039826.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18937.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..295
                     /product="DUF5685 family protein"
                     /calculated_mol_wt=34303
     Region          1..266
                     /region_name="DUF5685"
                     /note="Family of unknown function (DUF5685); pfam18937"
                     /db_xref="CDD:465920"
ORIGIN      
        1 mfgyisinka emkfkdydiy hsyycglcks lkkcygirgq mtlsfdmtfl vvlltglyep
       61 dttissvrcv ahpfekhltr tneftdyaaa inmvltyykc kddwdderkk kgyaaarllq
      121 srvekvreky pqkvqliasd lkklselekk neqnidlmag lfgdimaeif vyshdewets
      181 lrkigfflgk fiylmdayed vekdihsgsy nplkesfltn enfaedcrel ltlmmaecsr
      241 efeklpillh adilrnvlys gvwchyttvt arrrekqntn thsdtaktnt gdhiq
//
LOCUS       WP_235248880             507 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Faecalicatena contorta].
ACCESSION   WP_235248880
VERSION     WP_235248880.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 507)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..507
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=58072
     Region          5..120
                     /region_name="REC_YesN-like"
                     /note="phosphoacceptor receiver (REC) domain of YesN and
                     related helix-turn-helix containing response regulators;
                     cd17536"
                     /db_xref="CDD:381091"
     Site            order(8..11,14..16,19,105..106)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381091"
     Region          <274..503
                     /region_name="adjacent_YSIRK"
                     /note="YSIRK-targeted surface antigen transcriptional
                     regulator; TIGR04094"
                     /db_xref="CDD:274977"
     Region          420..503
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
ORIGIN      
        1 mriavvedea pireglgnil gkldpgyelv gkarngregl elvktkrpdl iildirmpdm
       61 dgltmlahir eekidcravi lsaysdfnya kraielgidn yllkpikvpe lkhvlkeiad
      121 svakdqskdh llslehvfln aitgqledde qlaallkeky glsedapiai fgvgmgdnye
      181 qynkyvqmvl eemgihgkgf rafsidfpkr rayitilyhl enventrlyi entiaqmlcs
      241 kisgklvmsw necqgllnvr savteaeqrl ewnlilgkkv lisrqkieev ttyplkyplh
      301 letqakesld akdekafknv wrklrdycre ipctpqdmke tmtrlafnla yvaaemgase
      361 aklqtqkflk viaeatswrd vegeldhffd glirknveke evslliqkal qytkqyynqg
      421 itleeisekl hiseeylssq fkketgstft etirkirieh vkelllkssl klnqiadmag
      481 ysdpkymskv fkeevgmlpl eyrkkng
//
LOCUS       WP_235248906             478 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Faecalicatena contorta].
ACCESSION   WP_235248906
VERSION     WP_235248906.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 478)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..478
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=54422
     Region          17..318
                     /region_name="GH43_XylA-like"
                     /note="Glycosyl hydrolase family 43-like protein such as
                     Clostridium stercorarium alpha-L-arabinofuranosidase XylA;
                     cd18620"
                     /db_xref="CDD:350132"
     Site            order(18,82,138..139,210..211,273..274,301)
                     /site_type="other"
                     /note="putative chemical substrate binding site [chemical
                     binding]"
                     /db_xref="CDD:350132"
     Region          369..456
                     /region_name="CBM6-CBM35-CBM36_like"
                     /note="Carbohydrate Binding Module 6 (CBM6) and CBM35_like
                     superfamily; cl14880"
                     /db_xref="CDD:449372"
ORIGIN      
        1 mktqchnpyl plyehipdge phifgdrlyi fgshdmengn efceldyvsw sapiddlsdw
       61 ryegviyqkd qdpynkdklp lyapdvvqgr dgrfylyyci kfqdsiqvav cdtpagkyef
      121 ygqvhykdgs vmadnqpydp svicteegny lyfgfapcmi niprymnqdl rggsvlqled
      181 dmitvrkgpe viipslkygr gtsfegneyf egpsirkiyg kyyliyssvh thqlcyaise
      241 kpmegftfgg vivsngdvgy ngrkeeeklm svgnnhgglv qvqgqwyify hrhtylnqyn
      301 rqscaekvyf denghipqvt ittsgmnpkl lsgdasypav yccnltnghm galsslgrtn
      361 qeidfpyitc egqeryiknl kdgnligyky inltetgsie ivyrtnadgv leiyteqnge
      421 kkaeilltka eawenaetvv sfseeqelyl vykgkgtlsl ltlnlkgmna keennekq
//
LOCUS       WP_235248992             340 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Faecalicatena contorta].
ACCESSION   WP_235248992
VERSION     WP_235248992.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..340
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=38926
     Region          4..152
                     /region_name="NUDIX_MutT_Nudt1"
                     /note="MutT homolog-1 and similar proteins; cd18886"
                     /db_xref="CDD:467596"
     Region          159..308
                     /region_name="NUDIX_Hydrolase"
                     /note="uncharacterized NUDIX hydrolase subfamily; cd04692"
                     /db_xref="CDD:467574"
ORIGIN      
        1 mtglstlcyi kkdgkylmlh rtvkkndvnk dkwigvgghf ekeespeecl lrevreetgy
       61 tltsyryrgi vtfvsgngvt eymslftadg fegepiacne gelewvdiee vwklniwegd
      121 kiffrliden qdffslkmvy dgrdrlvsaa lngkpmelfd ilnpdgsksg lvrergvthr
      181 egslhatvhm wvvrpnqksg ydvllqkrsa vkdsnpgsyd issaghvaag declesavre
      241 meeelgmcvr kedlhyvgih hgkfeavfhg kvfrdnelss vyvytepvei nslrlqesev
      301 eeviwmdyee crqkvhegti dhciyedefr mvgeylntsi
//
LOCUS       WP_235248997             595 aa            linear   BCT 02-MAR-2025
DEFINITION  aminopeptidase P family N-terminal domain-containing protein
            [Faecalicatena contorta].
ACCESSION   WP_235248997
VERSION     WP_235248997.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16189.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..595
                     /product="aminopeptidase P family N-terminal
                     domain-containing protein"
                     /calculated_mol_wt=67390
     Region          6..133
                     /region_name="Creatinase_N"
                     /note="Creatinase/Prolidase N-terminal domain; pfam01321"
                     /db_xref="CDD:460159"
     Region          149..307
                     /region_name="Creatinase_N_2"
                     /note="Creatinase/Prolidase N-terminal domain; pfam16189"
                     /db_xref="CDD:465053"
     Region          310..535
                     /region_name="APP_MetAP"
                     /note="A family including aminopeptidase P, aminopeptidase
                     M, and prolidase. Also known as metallopeptidase family
                     M24. This family of enzymes is able to cleave amido-,
                     imido- and amidino-containing bonds. Members exibit
                     relatively narrow substrate specificity...; cl00279"
                     /db_xref="CDD:469704"
     Site            order(376,396,407,474,506,520)
                     /site_type="active"
                     /db_xref="CDD:238514"
     Region          535..595
                     /region_name="Peptidase_M24_C"
                     /note="C-terminal region of peptidase_M24; pfam16188"
                     /db_xref="CDD:465052"
ORIGIN      
        1 msiperlkkl rikmeekgvd vyivptadfh qneyvgeyfk arkyitgfsg sagtavitkd
       61 earlwtdgry fiqaaqqlkd ttvelmkigv pgvptlpeyl kevlksgdtl gfdgrvvsvg
      121 egeeyakvae ekqakvayhe dlidliwedr pelskasafs lgieyageta adklkrirek
      181 mekaganvhv lttlddicwt lnirgddief fplvlsyaii rmdsmelyvd enklndeika
      241 qlnelnvhlh pyndiyedic kldgetvali dpgklnyaly nnipenvkkv eaenptmlmk
      301 saknpveven irkaqikdsv ahvrfmkwlk envgktrite msatekldel raemgnfirp
      361 sfepiasyge hgaivhyist petdvelkeg nffmtdtgag fwegstdvtr tyalgevtqq
      421 mkddftlvai snlslgsakf legctgivld llarkpfwdr nlnfnhgtgh gvgyllnihe
      481 spasfrwryv kgdtavlqeg mvitdepgfy vegshgirle nellcckgek neygqfmyfd
      541 eitlipmdld ainpdimtee ekkllnnyhk kvydtispyl nkeetewlak ytrav
//
LOCUS       WP_235249052             501 aa            linear   BCT 02-MAR-2025
DEFINITION  glucosaminidase domain-containing protein [Faecalicatena contorta].
ACCESSION   WP_235249052
VERSION     WP_235249052.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 501)
  AUTHORS   Nambu,T., Minamino,T., Macnab,R.M. and Kutsukake,K.
  TITLE     Peptidoglycan-hydrolyzing activity of the FlgJ protein, essential
            for flagellar rod formation in Salmonella typhimurium
  JOURNAL   J Bacteriol 181 (5), 1555-1561 (1999)
   PUBMED   10049388
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013954.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01832.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..501
                     /product="glucosaminidase domain-containing protein"
                     /GO_function="GO:0004040 - amidase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=54773
     Region          25..162
                     /region_name="Amidase_2"
                     /note="N-acetylmuramoyl-L-alanine amidase; pfam01510"
                     /db_xref="CDD:460236"
     Region          <169..361
                     /region_name="FlgJ"
                     /note="Flagellum-specific peptidoglycan hydrolase FlgJ
                     [Cell wall/membrane/envelope biogenesis, Cell motility];
                     COG1705"
                     /db_xref="CDD:441311"
ORIGIN      
        1 mgftnsslva ytklspnhsg qrtmkidrit phcvvgqcta eglgdwfyks stqassnygi
       61 dkngsvgmyv eeknrswcts snandqrait iecasdtvep ytmyevvydr lidlcvdick
      121 rngkkkllwf gdkdktlnye pksdemiitv hrwfankscp gnwlyarlgd laakvtaqlg
      181 ggsaevipsg mqarefanls eaqvvakvgs lftadqkksg ilasvsmaqf ilesgygkse
      241 laqganncfg mkkslsgntw vgstwdgvsv ytkktqeqna dgsyvtitad frrygcveds
      301 iadhsayllg akngsklrye glkgctdykk aaqiiknggy atsptyvdkl csiierwklt
      361 qydvdgeasd vvkyyrvrks wedatsqlga ytifanakam adkhpgyevy dwngkqvype
      421 iadsgsgdcm snadcpfmvk vsipdlnirk gagtntsktg qytgigafti vevregkgsd
      481 kgwgklksga gwisldycqk v
//
LOCUS       WP_235249078             459 aa            linear   BCT 02-MAR-2025
DEFINITION  relaxase/mobilization nuclease domain-containing protein
            [Faecalicatena contorta].
ACCESSION   WP_235249078
VERSION     WP_235249078.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 459)
  AUTHORS   Meyer,R.
  TITLE     Identification of the mob genes of plasmid pSC101 and
            characterization of a hybrid pSC101-R1162 system for conjugal
            mobilization
  JOURNAL   J Bacteriol 182 (17), 4875-4881 (2000)
   PUBMED   10940031
REFERENCE   2  (residues 1 to 459)
  AUTHORS   Bravo-Angel,A.M., Gloeckler,V., Hohn,B. and Tinland,B.
  TITLE     Bacterial conjugation protein MobA mediates integration of complex
            DNA structures into plant cells
  JOURNAL   J Bacteriol 181 (18), 5758-5765 (1999)
   PUBMED   10482518
REFERENCE   3  (residues 1 to 459)
  AUTHORS   Byrd,D.R. and Matson,S.W.
  TITLE     Nicking by transesterification: the reaction catalysed by a
            relaxase
  JOURNAL   Mol Microbiol 25 (6), 1011-1022 (1997)
   PUBMED   9350859
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015397.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03432.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..459
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /calculated_mol_wt=52959
     Region          10..247
                     /region_name="Relaxase"
                     /note="Relaxase/mobilization nuclease domain; cl21589"
                     /db_xref="CDD:451322"
ORIGIN      
        1 mayikifgik stvkkavdyi tnpdktddqn lvssygcspe tadltfamta klgkdnvmek
       61 gdnlawhmii sfkpgeitdp nvahevatki adatlkgkhe yvlsthvdkd hvhchlifna
      121 tnfvdyhkyv snkrnyhkic klsnricqey gleesmptgq kaksykenme ykrgnswkak
      181 lkynvdraiw ssvsfdeflm kmkeagyeir qgkylafrap dqkhftnvkt lgsyyaedsi
      241 lrrleknrhk iripqnaafk vkmfvqmtsy vadgnhpgfd qwarknnlke aaktfcylsq
      301 hnllnyeefq nhisdleasi qaadvqllqt qkaiqnqkii mkhcevyrac rdvvraekda
      361 pdkalyrkqh qaeyqlhdvt lkelaefgih klpsseklqr qqleleeelv sakkekqdll
      421 kqqktlqvie hnfdamireg gikvpkkeps pktqedils
//
LOCUS       WP_235249092             160 aa            linear   BCT 02-MAR-2025
DEFINITION  type I restriction enzyme HsdR N-terminal domain-containing protein
            [Faecalicatena contorta].
ACCESSION   WP_235249092
VERSION     WP_235249092.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 160)
  AUTHORS   Piekarowicz,A., Klyz,A., Kwiatek,A. and Stein,D.C.
  TITLE     Analysis of type I restriction modification systems in the
            Neisseriaceae: genetic organization and properties of the gene
            products
  JOURNAL   Mol Microbiol 41 (5), 1199-1210 (2001)
   PUBMED   11555298
REFERENCE   2  (residues 1 to 160)
  AUTHORS   Makovets,S., Doronina,V.A. and Murray,N.E.
  TITLE     Regulation of endonuclease activity by proteolysis prevents
            breakage of unmodified bacterial chromosomes by type I restriction
            enzymes
  JOURNAL   Proc Natl Acad Sci U S A 96 (17), 9757-9762 (1999)
   PUBMED   10449767
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024976.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13588.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..160
                     /product="type I restriction enzyme HsdR N-terminal
                     domain-containing protein"
                     /calculated_mol_wt=18516
     Region          32..146
                     /region_name="HSDR_N"
                     /note="Type I restriction enzyme R protein N terminus
                     (HSDR_N); cl29110"
                     /db_xref="CDD:452924"
ORIGIN      
        1 mnigritary knivlenkif dpirnkyvkl tpeeavrqki ikflmkrlqv pqdkilvera
       61 lgtlgllvae dkkkqridig ildeegllma vveckaslls nteaaftqaq nyllslntry
      121 yfvtdgstfd gyyfdtnqfv kleeiptynn wyyypiakde
//
LOCUS       WP_235249115              61 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Faecalicatena contorta].
ACCESSION   WP_235249115
VERSION     WP_235249115.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 61)
  AUTHORS   Mullin,D.A., Zies,D.L., Mullin,A.H., Caballera,N. and Ely,B.
  TITLE     Genetic organization and transposition properties of IS511
  JOURNAL   Mol Gen Genet 254 (4), 456-463 (1997)
   PUBMED   9180700
REFERENCE   2  (residues 1 to 61)
  AUTHORS   Fischer,J., Maier,H., Viell,P. and Altenbuchner,J.
  TITLE     The use of an improved transposon mutagenesis system for DNA
            sequencing leads to the characterization of a new insertion
            sequence of Streptomyces lividans 66
  JOURNAL   Gene 180 (1-2), 81-89 (1996)
   PUBMED   8973350
REFERENCE   3  (residues 1 to 61)
  AUTHORS   Zekri,S. and Toro,N.
  TITLE     Identification and nucleotide sequence of Rhizobium meliloti
            insertion sequence ISRm6, a small transposable element that belongs
            to the IS3 family
  JOURNAL   Gene 175 (1-2), 43-48 (1996)
   PUBMED   8917074
  REMARK    Erratum:[Gene 1997 Mar 25;188(1):149]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01527.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..61
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..61
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=7056
     Region          1..>57
                     /region_name="InsE"
                     /note="Transposase InsE and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2963"
                     /db_xref="CDD:442203"
ORIGIN      
        1 mskkkyskef klkvlkehee gasfyslekk ydivlgtvkr wnaafkahge taldrhnsnl
       61 w
//
LOCUS       WP_235249127             840 aa            linear   BCT 02-MAR-2025
DEFINITION  rhodanese-like domain-containing protein [Faecalicatena contorta].
ACCESSION   WP_235249127
VERSION     WP_235249127.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 840)
  AUTHORS   Gliubich,F., Gazerro,M., Zanotti,G., Delbono,S., Bombieri,G. and
            Berni,R.
  TITLE     Active site structural features for chemically modified forms of
            rhodanese
  JOURNAL   J Biol Chem 271 (35), 21054-21061 (1996)
   PUBMED   8702871
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00581.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..840
                     /product="rhodanese-like domain-containing protein"
                     /calculated_mol_wt=91954
     Region          333..>423
                     /region_name="PspE"
                     /note="Rhodanese-related sulfurtransferase [Inorganic ion
                     transport and metabolism]; COG0607"
                     /db_xref="CDD:440372"
     Region          457..561
                     /region_name="PspE"
                     /note="Rhodanese-related sulfurtransferase [Inorganic ion
                     transport and metabolism]; COG0607"
                     /db_xref="CDD:440372"
     Region          <616..834
                     /region_name="pneumo_PspA"
                     /note="pneumococcal surface protein A; NF033930"
                     /db_xref="CDD:468251"
ORIGIN      
        1 mrkrmyalll agvmvfsqsg ltvmaadave tetpavvqaa ttvtpnktsi patggyiift
       61 tdgevedwsv wvgdqeleee qdyyvdvmss irtavgffen pgteartltv ildgikteit
      121 qeaaentgit gvtlvsrtfl adgktefvyd vegqdlqevg irvkeginkt idgskyevkr
      181 egtgakqrvt itfvpysqlg efddvlnwti rfypsssdmt ssnyktadiq iikdetpaad
      241 aaitsvtasa etaayangtv eltvagtgld tadlevtadp adgvsigtfa gtateqkvtv
      301 sfpvnattsp vayklsvglk gqeekkdvtv nvsgantisg adalkepani ldvreletrn
      361 svghvpgsmf cpqfplddps ldevmqtyaq rfvgttqpiy vlckggvkga qratlnllta
      421 gveperifti vkgasdtdik aalttdrfnd piewnyvdaq tavdaandan sgvhmldtrk
      481 aslykaghlr rsvsmpvlde dgviqaelln elaafaveny lsdeepiyil cnsgnklakt
      541 avslmmdvgi sldrlfiiqg gaageivkan livegewvad svgvwyknpd gsypkacwkq
      601 idgywyhfda kgyretgwkk inskwyffde dgvmladgwl edgedyyyld angamvtgwl
      661 pqeegwyyla gngkmvtgwv kssgkwyymd detgimleet givdedgnay ylkkggamat
      721 gwqliegdyy yfassgkmvt gwvqsknvwy ymdktegyml eeawtpdgny ylkaggamat
      781 gwqkidgawy yfsstgkkvv skwvgnyyls edgtmatsew vdggkyyvde ngkwdpsktk
//
LOCUS       WP_235249204             247 aa            linear   BCT 02-MAR-2025
DEFINITION  AzlC family ABC transporter permease [Faecalicatena contorta].
ACCESSION   WP_235249204
VERSION     WP_235249204.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015549.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03591.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..247
                     /product="AzlC family ABC transporter permease"
                     /calculated_mol_wt=27899
     Region          7..227
                     /region_name="AzlC"
                     /note="AzlC protein; cl00570"
                     /db_xref="CDD:469826"
ORIGIN      
        1 mseykyafkk afpytipvlt gylfigiafg vmfaekgysf lwaifmsimv yagsgqylav
       61 nffapgvsff qmifmtlmvn irhifygisl ldkfnhmgkk rwymifgltd etysllcttr
      121 ipegvdeekf lfaislmdqa ywvigsaigg lagtlipfns egidfamtal fvvifveqwm
      181 dnknripeli gvgassvclq ifgadrfvlp smiliilvlf vsrtkleeek kendarkegi
      241 rdadqcs
//
LOCUS       WP_235249250             229 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Faecalicatena contorta].
ACCESSION   WP_235249250
VERSION     WP_235249250.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..229
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=26145
     Region          6..227
                     /region_name="PRK10529"
                     /note="DNA-binding transcriptional activator KdpE;
                     Provisional"
                     /db_xref="CDD:182522"
ORIGIN      
        1 mekkkilive ddkyivnfis malkkedygf yiartveeai slfyanqpdl vildlglpdg
       61 dgmeviqsir gisdvpvivv sarqeeqeki qvldagaddy vtkpfhmgel marirvglrk
      121 lnclrteeiq tvfhtgklkv dyekriveta gkevhltpie ykillllian rgkvlthnyi
      181 ikeiwgyaed idagnlrvfm atlrrkieed panpeyilte igvgyrfre
//
LOCUS       WP_235249282             322 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3089 domain-containing protein [Faecalicatena contorta].
ACCESSION   WP_235249282
VERSION     WP_235249282.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11288.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..322
                     /product="DUF3089 domain-containing protein"
                     /calculated_mol_wt=37066
     Region          32..225
                     /region_name="DUF3089"
                     /note="Protein of unknown function (DUF3089); pfam11288"
                     /db_xref="CDD:431786"
ORIGIN      
        1 mykydiigkp sdysnsnnwl ripnpdrmeh kvdiiyligt iaenangpdi cdineptmrv
       61 veaadydkaa difspfcnvf ipwwrqvdgt alfrltpdev dklqyheprt dvyamldyyf
      121 ehynngkpyf lvghsqgarm isivledymp ehpdryekmi aayrigdgmt keylsknphi
      181 kaaqkaddin vciswctegk enasfyglia kpdcvcinpl nwktddtyas tdenlgcemp
      241 dllngttvtm dgfadaqint drgtvvvtte kckeyvdwks wgeqvkeafg pesyhgsdfs
      301 ffyynirena ilrakkwfek ye
//
LOCUS       WP_235249305             472 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: phospholipase D-like domain-containing protein
            [Bacillaceae].
ACCESSION   WP_235249305
VERSION     WP_235249305.1
KEYWORDS    RefSeq.
SOURCE      Bacillaceae
  ORGANISM  Bacillaceae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13091.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Bacillaceae"
                     /db_xref="taxon:186817"
     Protein         1..472
                     /product="phospholipase D-like domain-containing protein"
                     /calculated_mol_wt=54228
     Region          65..258
                     /region_name="PLDc_SF"
                     /note="Catalytic domain of phospholipase D superfamily
                     proteins; cl15239"
                     /db_xref="CDD:472788"
     Site            order(209,211,223,225,233)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197227"
     Site            209
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197227"
     Region          282..438
                     /region_name="PLDc_unchar2_2"
                     /note="Putative catalytic domain, repeat 2, of
                     uncharacterized phospholipase D-like proteins; cd09130"
                     /db_xref="CDD:197228"
     Site            order(379,381,397,399,411)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197228"
     Site            379
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197228"
ORIGIN      
        1 mkrivgilfl lfiiiyssti yyhvkkplpi gmsvegaihq vedielltdi tyknkqnkrv
       61 vqhevfhtml kdiqqakkfi vvdmflfnkd tnedqvyppl veeftkalik kktdnpsisi
      121 vlltdkinti ygsypseeln dlkqigikvi etnvkklrds nplysafwrm fgqwgktngn
      181 ghlpnllaks gqkitvlsyl ellnvkanhr kllitenaai issgnihnas gyhsniafrv
      241 dgniindlle seesaarlne hlhlpripkq petntqieiq lltegkigkh vleeisktds
      301 kdsiwigily ladrnvidei kaaaarrvhi yllldpnqns fgnkksglpn ipvvaelrks
      361 kvsknihikw yntgkeqyhp kimliereta dtiisgsanf trrnlydfnl etdikiiakk
      421 etkvaietks yfqrlwtndg aeytrdvdtq sklpffryiv yrlqrvlwft ty
//
LOCUS       WP_235249348             232 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Faecalicatena contorta].
ACCESSION   WP_235249348
VERSION     WP_235249348.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..232
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=26130
     Region          39..157
                     /region_name="NUDIX_NadM_like"
                     /note="bifunctional NMN adenylyltransferase/ADP-ribose
                     pyrophosphatase and similar proteins; cd18873"
                     /db_xref="CDD:467585"
ORIGIN      
        1 mpsflkdvsr fkgtgeknan gqtleeflea ydpyryrtps cttdavifay tdqleaslsg
       61 lkillvkrkn hpsigywalp ggfinldedl ddtarrelee etgvkglvme qigtygdcdr
      121 dprtrvitta ymalveekqv evqagddaad aawcdvrlel kqtewtkere qdlyvlhien
      181 adreldttav vkrdmtcgli reekysveem gmlaadhaai ivqalvllkn rl
//
LOCUS       WP_235249380             640 aa            linear   BCT 02-MAR-2025
DEFINITION  WG repeat-containing protein [Faecalicatena contorta].
ACCESSION   WP_235249380
VERSION     WP_235249380.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026253.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14903.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..640
                     /product="WG repeat-containing protein"
                     /calculated_mol_wt=73088
     Region          2..>129
                     /region_name="YvbJ"
                     /note="Uncharacterized protein YvbJ, contains N-terminal
                     Zn ribbon domain [Function unknown]; COG4640"
                     /db_xref="CDD:443678"
     Region          116..144
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          358..386
                     /region_name="WG_beta_rep"
                     /note="WG containing repeat; pfam14903"
                     /db_xref="CDD:464361"
     Region          386..440
                     /region_name="WG_beta_rep"
                     /note="WG containing repeat; pfam14903"
                     /db_xref="CDD:464361"
     Region          444..475
                     /region_name="WG_beta_rep"
                     /note="WG containing repeat; pfam14903"
                     /db_xref="CDD:464361"
ORIGIN      
        1 mycgncgtqn kdgarfckec geplqapems rfqtqapggg tsgavkkter kkwilaaagv
       61 lvlavivags lsfknkqekk kydnymtqae kymedmdyek akdsylrala idpkekdayl
      121 glydlyvtqg dfdraedilr eaqknvpgvs kgeyekeean ngsntveesd evnqllnsgv
      181 efewvmkpri eaesiyyvss adyeensind iqrqkmspya vieteeglgl idmegnpvte
      241 miysdiytvw tdsedqymlt rsepqyeaew dcdwemyclq ngevvpamfg dggmpfsyyi
      301 yrnelhntie daewdmelky svpqdaipiq kldrllgvye ydyswplded apfavyadgk
      361 lvtdfiydac gscaagllav qkdgkwgyin eqgeevipve ydaswkkytp lmnaagsdky
      421 qefcyaasdg yvvlckddvw elrdvsgnia irpgmfeeic pvyenkcwvk kngkwgiiel
      481 qtkdskedqt enekvtaqey qdiygpildq ileeygeyng yylydidkdg vkellaqegd
      541 ceaaymyqiy tikdhacvyl geitgghsmf yadesggkes yiirhcaqmg heqlyhvsiq
      601 ngsvteeeis erdlesydde yysnpypley tyvtdrtslq
//
LOCUS       WP_235249383             252 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: TraR/DksA C4-type zinc finger protein [Bacillaceae].
ACCESSION   WP_235249383
VERSION     WP_235249383.1
KEYWORDS    RefSeq.
SOURCE      Bacillaceae
  ORGANISM  Bacillaceae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales.
REFERENCE   1  (residues 1 to 252)
  AUTHORS   Perederina,A., Svetlov,V., Vassylyeva,M.N., Tahirov,T.H.,
            Yokoyama,S., Artsimovitch,I. and Vassylyev,D.G.
  TITLE     Regulation through the secondary channel--structural framework for
            ppGpp-DksA synergism during transcription
  JOURNAL   Cell 118 (3), 297-309 (2004)
   PUBMED   15294156
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01258.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Bacillaceae"
                     /db_xref="taxon:186817"
     Protein         1..252
                     /product="TraR/DksA C4-type zinc finger protein"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=29087
     Region          5..163
                     /region_name="zf-dskA_traR"
                     /note="Prokaryotic dksA/traR C4-type zinc finger; cl00755"
                     /db_xref="CDD:445081"
ORIGIN      
        1 mlnkqqmshf qkvldeqkid levrfdqndn lglkdghyhe svgelssydn hpgdegtely
       61 erekdialae hyhheymgvl nalkaidegt ygkcatcsqd ipierlevip ttlycrehsp
      121 dqkisekrpv eeeilmppfg kfdmdnkdes vvfdaedswq evsswgtset psdfahpvfd
      181 hyndvytesn enigyvedye nfigvdiegk nitvypneqh kryeqsldee gimttfgdlp
      241 ayehepyven ed
//
LOCUS       WP_235249447             121 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein, partial [Faecalicatena contorta].
ACCESSION   WP_235249447
VERSION     WP_235249447.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 121)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07883.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         <1..121
                     /product="cupin domain-containing protein"
     Region          <56..109
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 grepdtdprs lrarvlprek evlrdtyyli drkagpskrl tcghttiypt gtttghahdd
       61 meeiyyfisg egimvvgedr fpvkagdacy vppgeyhtti qtgilpltfv wntclvdgde
      121 e
//
LOCUS       WP_235249462             227 aa            linear   BCT 02-MAR-2025
DEFINITION  LiaF transmembrane domain-containing protein [Faecalicatena
            contorta].
ACCESSION   WP_235249462
VERSION     WP_235249462.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046770.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22570.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..227
                     /product="LiaF transmembrane domain-containing protein"
                     /calculated_mol_wt=24496
     Region          8..227
                     /region_name="LiaF"
                     /note="Membrane protein LiaF, inhibitor of the LiaRS
                     two-component envelope stress sensory system [Signal
                     transduction mechanisms]; COG4758"
                     /db_xref="CDD:443791"
     Region          129..226
                     /region_name="DUF2154"
                     /note="Cell wall-active antibiotics response 4TMS YvqF;
                     cl41858"
                     /db_xref="CDD:477831"
ORIGIN      
        1 mkrvnsvlwg vvliavgavl alnatgiasi niffdgwwtl fiivpcfigl fsqtdksgnl
       61 iglligvllf lacqnifdfd ilwklivpii iagiglkmll kgitgneste ilstmkqnge
      121 emktgfaafs gqnlnydqev ftgaeltavf ggikcdlrna lierdavint ssifggidil
      181 vpdtvnvkvn snsifggvdm kkhqnskdne ytiyinstcm fggvdvk
//
LOCUS       WP_235248638             307 aa            linear   BCT 02-MAR-2025
DEFINITION  SpoIID/LytB domain-containing protein [Faecalicatena contorta].
ACCESSION   WP_235248638
VERSION     WP_235248638.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Abanes-De Mello,A., Sun,Y.L., Aung,S. and Pogliano,K.
  TITLE     A cytoskeleton-like role for the bacterial cell wall during
            engulfment of the Bacillus subtilis forespore
  JOURNAL   Genes Dev 16 (24), 3253-3264 (2002)
   PUBMED   12502745
REFERENCE   2  (residues 1 to 307)
  AUTHORS   Lopez,R., Gonzalez,M.P., Garcia,E., Garcia,J.L. and Garcia,P.
  TITLE     Biological roles of two new murein hydrolases of Streptococcus
            pneumoniae representing examples of module shuffling
  JOURNAL   Res Microbiol 151 (6), 437-443 (2000)
   PUBMED   10961456
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020075.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08486.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..307
                     /product="SpoIID/LytB domain-containing protein"
                     /calculated_mol_wt=34983
     Region          <63..299
                     /region_name="SpoIID_LytB"
                     /note="SpoIID/LytB domain; cl26737"
                     /db_xref="CDD:474850"
ORIGIN      
        1 mrqrlkkwgc yaiiivllpy vitvflngse ievsshvdqt cvkvrissgd eeentdeeee
       61 teivrmpiae ycigvlarei padyekealk aqailvrtdv ykkiiesgsn tileepfwtq
      121 ekmeqawgtq yskkyhkleq iweetegqvl myneelaytp ffrlsngctr dgaealgsea
      181 ypylkivdcq adieseeqiq tlvtddmdae vtavdsagyv tnvrvgqeni sgeefrknyh
      241 lqsgcftlqr yngkmrittr gighgigmsq ysanrmaesg kkyqeilnyf fegteikeva
      301 eillete
//
LOCUS       WP_235249542             315 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: substrate-binding domain-containing protein
            [Niallia].
ACCESSION   WP_235249542
VERSION     WP_235249542.1
KEYWORDS    RefSeq.
SOURCE      Niallia
  ORGANISM  Niallia
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024138.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12727.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Niallia"
                     /db_xref="taxon:2837506"
     Protein         1..315
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=35668
     Region          9..313
                     /region_name="YvgK"
                     /note="Periplasmic molybdate-binding protein/domain
                     [Inorganic ion transport and metabolism]; COG1910"
                     /db_xref="CDD:441514"
ORIGIN      
        1 mshkksytte eiadilkvsk ltvydlikkg klaayrvgrq mrvdeadlek fkwnakekqp
       61 ttnessrlpi lspnhfhdpf tnirsiiisg qdpsldilsr hldnsvdyfr plrsyassln
      121 giisqyngev diasvhlfdg etstfnlpyl kkllvshsfi virfinrwag fyvkhgnpkk
      181 iiswqdiqrs dikllnreig sgartlldeh lrmnnitiqs iygyeevats hfsvavgiaq
      241 nkadfgigme kinypsgidf lplvkenydl vilrssaneq liqlvvellk tkelknelsa
      301 ggydisetgk iiysq
//
LOCUS       WP_235249534             678 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase [Faecalicatena contorta].
ACCESSION   WP_235249534
VERSION     WP_235249534.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 678)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..678
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /calculated_mol_wt=77172
     Region          3..678
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 mgkslyiaek psvaqefaka lnmktrrqdg ylesedaivt wcvghlvtms ypeaydpalk
       61 kwsletlpfl peefkyevip avskqfkivs gllnrndvet iyvctdsgre geyiyrlveq
      121 qagvhgkkrr rvwidsqtee eilrgireak dlkeydnlas saylrakedy lmginfsrll
      181 tlkygnsist ylhtrysvis vgrvmtcvlg mvvrrereir dfvetpfyrv vssigdpgqt
      241 fegewravkg srwfesfdly kengfkerkk aqeliaylse elpvrcqias iekkkekknp
      301 pllfnlaelq necskrfkis pdetlrivqe lyekklvtyp rtdarvlsta vakeiyknln
      361 glmkyepvve ylqdivqfgs hkglektryv ndkqitdhya iiptgqgmna lsglsrlsgq
      421 vydvivrrfl sifyppavyq kvaimtkire esffssfkvl aeegylkvag ipgqkksggi
      481 vrdsakgaee dtddtggkdt daaffqkiqt lkkgmvlevq sleikegkts ppkrynsgsl
      541 ilamenagql iedeelraqi kgsgigtsat rgeilkklfn nkylalnkkt qivtptmqge
      601 miydvvdhsi ksllnpelta swekgltyva dgdispeeym qkldqfivsr tqgvkglnnq
      661 yqlqacydkv akyykkrt
//
LOCUS       WP_235249828             277 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein
            [Faecalicatena contorta].
ACCESSION   WP_235249828
VERSION     WP_235249828.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 277)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..277
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=29489
     Region          53..275
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mkknliaall cvtmvgtmli gcgkeessda sgekettsea seeeiqgslk gvtlrvgtsg
       61 lygpfsyyde dgstligydl dliqdlqdil gfeieggvqa mdysalttsl aegkldvgaa
      121 alcatderke vmnfteiycd agqvvminse ddkgitgvdd lagkvvavek gtashtyask
      181 nltdstlevh dtittayesl eqgkvdavlq dgpgaafyik ttegtklkvv gdefnqgqsp
      241 ycvavakdck yydqinaalk mliedgttae lyskwce
//
LOCUS       WP_235249924             105 aa            linear   BCT 02-MAR-2025
DEFINITION  efflux RND transporter permease subunit, partial [Escherichia
            coli].
ACCESSION   WP_235249924
VERSION     WP_235249924.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 105)
  AUTHORS   Murakami,S., Nakashima,R., Yamashita,E. and Yamaguchi,A.
  TITLE     Crystal structure of bacterial multidrug efflux transporter AcrB
  JOURNAL   Nature 419 (6907), 587-593 (2002)
   PUBMED   12374972
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00873.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>105
                     /product="efflux RND transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          1..>105
                     /region_name="ACR_tran"
                     /note="AcrB/AcrD/AcrF family; cl47191"
                     /db_xref="CDD:481531"
ORIGIN      
        1 manffirrpi fawvlaiilm magalailql pvaqyptiap pavsvsanyp gadaqtvqdt
       61 vtqvieqnmn gidnlmymss tsdsagsvti tltfqsgtdp diaqv
//
LOCUS       WP_235250083             310 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Faecalicatena contorta].
ACCESSION   WP_235250083
VERSION     WP_235250083.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 310)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..310
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=35921
     Region          25..291
                     /region_name="Hydrolase_4"
                     /note="Serine aminopeptidase, S33; pfam12146"
                     /db_xref="CDD:463473"
ORIGIN      
        1 mkqefyypsr dgktqihaie wipegeikgv lqichgmvey igryhefaey msqngyyvtg
       61 hdhlghgksi qteeelgyfd etrgnqyvig dihklrertm kkypdasyym lghsmgsfll
      121 reyltmygkg ldgavimgtg yqsafilnag qlvcrgiaaf kgwkhrsrfv dnlsfgsynk
      181 rfepaettkd witsdrekrq kyvedplcsy mftlgayyqm fegmkvltkk esleripkdl
      241 pilfvsgkdd pvgafgksvt kvyekykaag ihnvsihlyq gdrheilnei drekvyhdiy
      301 rwietkecae
//
LOCUS       WP_235250098             273 aa            linear   BCT 02-MAR-2025
DEFINITION  phage antirepressor N-terminal domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_235250098
VERSION     WP_235250098.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 273)
  AUTHORS   Iyer,L.M., Koonin,E.V. and Aravind,L.
  TITLE     Extensive domain shuffling in transcription regulators of DNA
            viruses and implications for the origin of fungal APSES
            transcription factors
  JOURNAL   Genome Biol 3 (3), RESEARCH0012 (2002)
   PUBMED   11897024
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022022.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10547.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>273
                     /product="phage antirepressor N-terminal domain-containing
                     protein"
     Region          11..117
                     /region_name="P22_AR_N"
                     /note="P22_AR N-terminal domain; pfam10547"
                     /db_xref="CDD:431351"
     Region          207..273
                     /region_name="P22_AR_C"
                     /note="P22AR C-terminal domain; pfam10548"
                     /db_xref="CDD:402261"
ORIGIN      
        1 mtslaiadrt invpfhgtnl flvginnepy vpmkpvvegm gmvwaaqfvk lkqrfvkgis
       61 eieipsaggk qlmtclafrk faawlssiqp nkvrpeirdk viqyqeecdd vlyeywtkgh
      121 vinprkakka lpgkitteqq eaikqlvmsr gqslpkekqa kamitmwssl kshfgcsyke
      181 iseeqfteal slaarvpleg eligkqekst nelsakeans lvwlwdyanr sqalfrelyp
      241 alkqiqsnys grcynyghef syvigmardv lin
//
LOCUS       WP_235250107              69 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein, partial [Escherichia coli].
ACCESSION   WP_235250107
VERSION     WP_235250107.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06763.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>69
                     /product="phage tail protein"
     Region          3..>69
                     /region_name="Minor_tail_Z"
                     /note="Prophage minor tail protein Z (GPZ); pfam06763"
                     /db_xref="CDD:284235"
ORIGIN      
        1 maikgldqai enlsrvrkna ipaasamain rvattainqs ssqvaretrv srklvkersr
       61 lkratvrnp
//
LOCUS       WP_235250115             136 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: zinc-finger-containing protein [Lachnospiraceae].
ACCESSION   WP_235250115
VERSION     WP_235250115.1
KEYWORDS    RefSeq.
SOURCE      Lachnospiraceae
  ORGANISM  Lachnospiraceae
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023101.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11672.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Lachnospiraceae"
                     /db_xref="taxon:186803"
     Protein         1..136
                     /product="zinc-finger-containing protein"
                     /calculated_mol_wt=15670
     Region          5..124
                     /region_name="DUF3268"
                     /note="zinc-finger-containing domain; pfam11672"
                     /db_xref="CDD:431994"
ORIGIN      
        1 mkkqiircpy cgspailrdt syvhgknawe gklyvcsryp vcnsyvsvhp gttrpkgtla
       61 nkslrekrir ahrifdqiwk qgimskkday rwisdkfcld ttqahignfs eymcerliee
      121 sekvlrynhv plclag
//
LOCUS       WP_235250131             309 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleoside recognition domain-containing protein [Faecalicatena
            contorta].
ACCESSION   WP_235250131
VERSION     WP_235250131.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 309)
  AUTHORS   Hantke,K.
  TITLE     Is the bacterial ferrous iron transporter FeoB a living fossil?
  JOURNAL   Trends Microbiol 11 (5), 192-195 (2003)
   PUBMED   12781516
REFERENCE   2  (residues 1 to 309)
  AUTHORS   Loewen,S.K., Ng,A.M., Yao,S.Y., Cass,C.E., Baldwin,S.A. and
            Young,J.D.
  TITLE     Identification of amino acid residues responsible for the
            pyrimidine and purine nucleoside specificities of human
            concentrative Na(+) nucleoside cotransporters hCNT1 and hCNT2
  JOURNAL   J Biol Chem 274 (35), 24475-24484 (1999)
   PUBMED   10455109
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019292.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07670.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..309
                     /product="nucleoside recognition domain-containing
                     protein"
                     /calculated_mol_wt=34441
     Region          3..309
                     /region_name="Gate"
                     /note="Nucleoside recognition; cl42053"
                     /db_xref="CDD:455398"
ORIGIN      
        1 mkrrifsici lllfllmlrf psrtfdgasa glllwfhnvl ptllpfmils nlmlqtpave
       61 wiarlisplf crvfcvsryg tfalligflc gypmgakvts dllkkqyity eeasyllsfc
      121 nntspaflmn yiilqtlgta dillpavcis flspvlcsfl frryyrlpdr vclsyqspvs
      181 stisasrltd scimnafdai trvggymilf svfaelatav fshapewfpl llssfeistg
      241 iqllntsfls vntkcifslt lasfggwccv aqtrsmisgt glpifpyiae klitamvtsl
      301 lscfyfiil
//
LOCUS       WP_235250139             200 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3993 domain-containing protein [Niallia circulans].
ACCESSION   WP_235250139
VERSION     WP_235250139.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024557.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13158.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..200
                     /product="DUF3993 domain-containing protein"
                     /calculated_mol_wt=23344
     Region          <30..121
                     /region_name="DUF3993"
                     /note="Protein of unknown function (DUF3993); pfam13158"
                     /db_xref="CDD:372503"
ORIGIN      
        1 mnksfftivi illlgifpys ahatshltsr devfafveka fraqvslske ardmeeiqei
       61 lapyfsekli ylflnenltg engafytygn efgkyylpfy qlsdqtfiet eensillyey
      121 yepiifgekv yegayegvli rkvnenwivt nmltdkevrt sinnkennys tlvymplfai
      181 enqvtyisnn wknhnvqtlk
//
LOCUS       WP_235250005             298 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2713 family protein, partial [Escherichia coli].
ACCESSION   WP_235250005
VERSION     WP_235250005.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 298)
  AUTHORS   Homma,K., Fukuchi,S., Kawabata,T., Ota,M. and Nishikawa,K.
  TITLE     A systematic investigation identifies a significant number of
            probable pseudogenes in the Escherichia coli genome
  JOURNAL   Gene 294 (1-2), 25-33 (2002)
   PUBMED   12234664
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022352.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10897.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>298
                     /product="DUF2713 family protein"
     Region          95..285
                     /region_name="DUF2713"
                     /note="Protein of unknown function (DUF2713); pfam10897"
                     /db_xref="CDD:313960"
ORIGIN      
        1 mlkiipgatg yfnktlnsnq fdnedaikdk ldnrgsikgk lnniygksid yaalrhrdii
       61 iakidlfiqr ithnlwhark knvflieqit nlkewvnkyi adctdeelnd rdfiasvvdr
      121 aifhfavnsi cntegnkdat pierytfdve tknglpstvq lfyeeskdne planihlqai
      181 gsgfltfvna cqkyddnslk lfasllisls yssaytdlag aekvnindhn gnyltaqfee
      241 lsqrdmkkyl gemkrladgg emnfdgyldk mshlvnegtl apdilgndsn llivfyvq
//
LOCUS       WP_235250178             283 aa            linear   BCT 02-MAR-2025
DEFINITION  prophage tail fiber N-terminal domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_235250178
VERSION     WP_235250178.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019996.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08400.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>283
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
     Region          1..125
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
     Region          118..>283
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     Region          <249..>283
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
ORIGIN      
        1 vqnctiqlka krnsttvvvn tlasenpdea grysmdveyg qysvillveg fppshagtit
       61 vyedsqpgtl ndflgamted darpealrrf elmveeaarh aeeakknage aetsarnagi
      121 sagqaeksav naetsagdas esarqatesa asakqsedas sssasaaaqk asessqsaae
      181 aelsrktaes aagnasrdat tatekaresa esaqsaeqsr iaaedavnri ptvvgppgpk
      241 gepgpagpqg pkgdkgergd tgpvgatger gpagdagpag pqg
//
LOCUS       WP_235250238             233 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5714 domain-containing protein [Faecalicatena contorta].
ACCESSION   WP_235250238
VERSION     WP_235250238.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040157.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18978.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..233
                     /product="DUF5714 domain-containing protein"
                     /calculated_mol_wt=25523
     Region          58..231
                     /region_name="DUF5714"
                     /note="Family of unknown function (DUF5714); pfam18978"
                     /db_xref="CDD:465938"
ORIGIN      
        1 mtrgegaclv cgkplvyfeh akemecsmch gtfesyasce dghfvcdech akrgievimn
       61 gcrksqsknp ieimqmlmmd pyiymhgpeh hvmvgaallt ayrncggeva yedaleemkk
      121 rgseypggac gmwgccgaav sagifmsiit kanpltgtsw rysnqmtsra lgaiaklggp
      181 rcckrdsfta akeaaafvqe slgidmelpk kiqcdfsqen qqclkrhcpy ykg
//
LOCUS       WP_235250247             409 aa            linear   BCT 02-MAR-2025
DEFINITION  [Fe-Fe] hydrogenase large subunit C-terminal domain-containing
            protein [Faecalicatena contorta].
ACCESSION   WP_235250247
VERSION     WP_235250247.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 409)
  AUTHORS   Peters,J.W., Lanzilotta,W.N., Lemon,B.J. and Seefeldt,L.C.
  TITLE     X-ray crystal structure of the Fe-only hydrogenase (CpI) from
            Clostridium pasteurianum to 1.8 angstrom resolution
  JOURNAL   Science 282 (5395), 1853-1858 (1998)
   PUBMED   9836629
  REMARK    Erratum:[Science 1999 Jan 1;283(5398):35]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014904.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02906.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..409
                     /product="[Fe-Fe] hydrogenase large subunit C-terminal
                     domain-containing protein"
                     /calculated_mol_wt=45425
     Region          48..389
                     /region_name="Nar1"
                     /note="Iron only hydrogenase large subunit, C-terminal
                     domain [Energy production and conversion]; COG4624"
                     /db_xref="CDD:443663"
ORIGIN      
        1 mktfdelyrd ilnrkvklee plppqydsrh ldcllhpeky apvipvsdce kctydracrq
       61 scifdaiird eegklsinpk lcsgcgvcmd acsmkkltar kdvlpvmkav reakepvyll
      121 vapaavgqfg edvtlgklrt aakalgftgm vevalfadil tlkealeydr hvkkkgdyql
      181 tscccpvwia mirkifhell phvpgavspm iacgriikrl hpdavtvflg pclakkkeae
      241 epdiadavdy vltfqemqdi ltaadihpgk ladmkkehas eagrlyartg gvsravenmv
      301 qqlradrnia vkaeqadgtr acmemierir aektdasffe gmgcvggcvg gpkvllsree
      361 gkqyvddyae aaefrtplen pyvlkileel gfhtveelle deslltrrl
//
LOCUS       WP_235250269             271 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerophosphodiester phosphodiesterase family protein
            [Faecalicatena contorta].
ACCESSION   WP_235250269
VERSION     WP_235250269.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 271)
  AUTHORS   Kim,H. and Farrand,S.K.
  TITLE     Characterization of the acc operon from the nopaline-type Ti
            plasmid pTiC58, which encodes utilization of agrocinopines A and B
            and susceptibility to agrocin 84
  JOURNAL   J Bacteriol 179 (23), 7559-7572 (1997)
   PUBMED   9393724
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03009.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..271
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /GO_function="GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=31326
     Region          40..266
                     /region_name="PI-PLCc_GDPD_SF"
                     /note="Catalytic domain of phosphoinositide-specific
                     phospholipase C-like phosphodiesterases superfamily;
                     cl14615"
                     /db_xref="CDD:472694"
     Site            order(42,71,73,139,169,245)
                     /site_type="active"
                     /db_xref="CDD:176498"
     Site            order(42,86)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176498"
ORIGIN      
        1 mkslliilgi ivillvgyly micprlfrrp disgflgthy ahrglfdnrt napensinai
       61 qkaveagygi efdvqltkdn vpvvfhdasl krmcgvegni wdytwqelrk fkladsdqti
      121 ptlekvlrvi ggkvpliiey kmdradtvic kignrilery qgkyciesfh pfalrwyrkn
      181 rpdivrgqls edfakggekn plliimtyll tnfltrpdfv ayrhrdagnl srricrklga
      241 lavawtvknq eqyerartqf dlfifdsfll r
//
LOCUS       WP_235250284             285 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4367 domain-containing protein [Faecalicatena contorta].
ACCESSION   WP_235250284
VERSION     WP_235250284.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025643.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14285.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..285
                     /product="DUF4367 domain-containing protein"
                     /calculated_mol_wt=32627
     Region          177..283
                     /region_name="DUF4367"
                     /note="Domain of unknown function (DUF4367); pfam14285"
                     /db_xref="CDD:433839"
ORIGIN      
        1 meehkdelte flqeefrksa ekeeesirhd tglcmpegmk eslrakideq ileiqqeqav
       61 aqlsdedrka lelgrkimqe eknadvpakt vvrrkkgwrl yvglaavlvl vmavgltsig
      121 gperivrfmk qavgereveq tdssednlvi vehdeetaye einkafgimp vkivngpegi
      181 qfnrmeldek iqvaeviyqy kdsivayfin asyknsswgi dvedklidsy vketgyceve
      241 ikvyevlnsk ktrcsasfqy ngleyfligt msaedfdiii nylff
//
LOCUS       WP_235250291             245 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6382 domain-containing protein [Faecalicatena contorta].
ACCESSION   WP_235250291
VERSION     WP_235250291.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039422.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19909.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..245
                     /product="DUF6382 domain-containing protein"
                     /calculated_mol_wt=29559
     Region          7..156
                     /region_name="DUF6382"
                     /note="Domain of unknown function (DUF6382); pfam19909"
                     /db_xref="CDD:466230"
ORIGIN      
        1 merkitieep vlykedyqmk mmkantlegi lrvegrging kscydydvsg kismkamyer
       61 skissedirm flmqfkavlk vteeyllnih cillkpeyif yeegrfyfcy ypparqdvwe
      121 efhllteyfv kqgdyqeqec vrlmfllhke tmeenyslek lmaecmqete vneekekrse
      181 kdvravsknv eydseehdwi teqefgsnil retenmwtpv krflgrhkkq kwgdwdglhi
      241 eeeel
//
LOCUS       WP_235250388             260 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Faecalicatena contorta].
ACCESSION   WP_235250388
VERSION     WP_235250388.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..260
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=28257
     Region          5..259
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(19,21..22,24,43..45,97..99,147..149,164,168,
                     194..197)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187610"
     Site            order(121,149,164,168)
                     /site_type="active"
                     /db_xref="CDD:187610"
ORIGIN      
        1 mmhvldlfrl dgklavitga aqglgramae aladcgadia ildlnvekaa vtaseiaeqy
       61 qvkakaykvn vasaescqea vkqvhedwgh idillndagi cinenaedvp lehwhkvidi
      121 nmngvwymsq avgkimieqk ggniinvssm sgfivndpqg qvsyntskag vahmtkslaa
      181 ewvkygirvn siapgymdte lvhktyvedg ewarrwnsmt pmkrpgrpee lgplavylas
      241 dastymtgsv ilidggytiw
//
LOCUS       WP_235250065             115 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family protein, partial [Escherichia coli].
ACCESSION   WP_235250065
VERSION     WP_235250065.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 115)
  AUTHORS   Heinz,D.W. and Matthews,B.W.
  TITLE     Rapid crystallization of T4 lysozyme by intermolecular disulfide
            cross-linking
  JOURNAL   Protein Eng 7 (3), 301-307 (1994)
   PUBMED   8177878
REFERENCE   2  (residues 1 to 115)
  AUTHORS   Blaber,M., Lindstrom,J.D., Gassner,N., Xu,J., Heinz,D.W. and
            Matthews,B.W.
  TITLE     Energetic cost and structural consequences of burying a hydroxyl
            group within the core of a protein determined from Ala-->Ser and
            Val-->Thr substitutions in T4 lysozyme
  JOURNAL   Biochemistry 32 (42), 11363-11373 (1993)
   PUBMED   8218201
REFERENCE   3  (residues 1 to 115)
  AUTHORS   Weaver,L.H. and Matthews,B.W.
  TITLE     Structure of bacteriophage T4 lysozyme refined at 1.7 A resolution
  JOURNAL   J Mol Biol 193 (1), 189-199 (1987)
   PUBMED   3586019
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013152.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00959.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..115
                     /product="glycoside hydrolase family protein"
                     /GO_function="GO:0003796 - lysozyme activity [Evidence
                     IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /GO_process="GO:0016998 - cell wall macromolecule
                     catabolic process [Evidence IEA]"
     Region          <1..108
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
ORIGIN      
        1 vvpgmklske kcdrvnaier dkalawvakn ikvpltepqk agiasfcpyn igpgkcfpst
       61 fykrinagdr kgaceairww ikdggrdcri rsnncygqvs rrdqesalac wgidr
//
LOCUS       WP_235250393             449 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4340 domain-containing protein [Faecalicatena contorta].
ACCESSION   WP_235250393
VERSION     WP_235250393.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025598.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14238.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..449
                     /product="DUF4340 domain-containing protein"
                     /calculated_mol_wt=50649
     Region          79..236
                     /region_name="DUF4340"
                     /note="Domain of unknown function (DUF4340); pfam14238"
                     /db_xref="CDD:433800"
     Region          212..383
                     /region_name="DUF4340"
                     /note="Domain of unknown function (DUF4340); pfam14238"
                     /db_xref="CDD:433800"
ORIGIN      
        1 mkqkrkiiva giliviiacg iyyltaddqs ktdsgegwic tkgtenitsi ainsgkdsqt
       61 liftkgeesw mgddgssydn drfapytatl gymkaeekln astadekeey giddssytvr
      121 vsyddgeeye yilgkdidnl gmylsadqgk siclidyqrt edilemvksl ydvalngvkf
      181 deirgislys pedgivsmnr sespraggdf ywnifkpygw iadtekvndl intieendvl
      241 krtdasvtle ssgldaaeee lpsislydty dsemiiyfgn tegnyvyckt nyldniylis
      301 keilqiadkr aedlidltly yyetpsietc tidfggevhv leaewetaen sntrgqryyl
      361 dqemitgaqy ssivswftdt kaerieasas gegtilgtit idrlsppyqq imtfrevenn
      421 pqlvqvdlek tgtayinrke feefqtsfq
//
LOCUS       WP_235250467             523 aa            linear   BCT 02-MAR-2025
DEFINITION  MobA/MobL family protein [Faecalicatena contorta].
ACCESSION   WP_235250467
VERSION     WP_235250467.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015354.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03389.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..523
                     /product="MobA/MobL family protein"
                     /calculated_mol_wt=60807
     Region          335..>424
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     Region          <343..>507
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
ORIGIN      
        1 mnrrnhsfvm esklhdvkgr vdyisspkrq enlyavfsnv edsywdllae qnqrdfaksg
       61 tegtcieare liimlppsli dydheillky itskflekyd vgccaalhhn ksktnlhihl
      121 ifsereiqqk verkiasrnm fynekgkhvr tkkeildedg nlrsgckiik kgevyetnff
      181 qpkkeefksn aflknmkqim mdaineivkd eneklqvfqk ggpylatkki gknnpkeaei
      241 radnylrkew nrnvdrallt gasevevmma kqsqidepva esfrqhgqdp klftgilkka
      301 vgylrgfvef lremkycdrd pegnpliahd iriditpepl pakpkgkrps sekqeaevmr
      361 lqqilnkmkk qeqkiyaiek aivklekdlk evkkkwfhkk eqkelegkid akkaqlekak
      421 dtldlipaqh gyqnalevtk amklakaelk kaqqaqkvwd apepepekmy lripanipnm
      481 ekqemqkstg qkrsiherle ekkqiaeqkt kkkikskdvg mer
//
LOCUS       WP_235250514             103 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6050 family protein [Faecalicatena contorta].
ACCESSION   WP_235250514
VERSION     WP_235250514.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039334.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19517.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..103
                     /product="DUF6050 family protein"
                     /calculated_mol_wt=11322
     Region          5..102
                     /region_name="DUF6050"
                     /note="Family of unknown function (DUF6050); pfam19517"
                     /db_xref="CDD:437349"
ORIGIN      
        1 mtivdvikkv llplaamvfw iwmvktimgv tgntdlfmfl flaglpfgih kmciiliprg
       61 ydvggtvgmi alsvivggll gslmipyyiv raiyvtiryi vkr
//
LOCUS       WP_235250596             415 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Faecalicatena contorta].
ACCESSION   WP_235250596
VERSION     WP_235250596.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 415)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 415)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..415
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=46086
     Region          1..404
                     /region_name="PRK09265"
                     /note="aminotransferase AlaT; Validated"
                     /db_xref="CDD:181738"
ORIGIN      
        1 mkeilrakrm emihsdirgp lfveamdmqa rgidvlrlnt gnpatfgfkq pesierales
       61 htadgvgycd fkgmpkarea iceyekskgi kgitpddvfi gngvsevvsf almpllndgd
      121 evlvptpsys iwgnsvylag gkpvfyvcde ksgwypdiqd irskitpktk amviinpnnp
      181 tgvlypkevl eeivqvarea gillfadeiy drlvmdgleh vslaslaedl pvvtmnglsk
      241 shclcgyrcg wmvisgprhl tedyrqgiiq ltslrlcant laqivipaal ddmetpasmv
      301 rpggriyeqr eatvreleki ngisfvknns afyifpkldv kkfhitedrv fardllhatn
      361 illvpgsgfd wqdpdhfriv mlpeaevlad avkrmgefld gykqgevrgi grkta
//
LOCUS       WP_235250611             265 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6270 domain-containing protein [Bacillaceae].
ACCESSION   WP_235250611
VERSION     WP_235250611.1
KEYWORDS    RefSeq.
SOURCE      Bacillaceae
  ORGANISM  Bacillaceae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039710.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19786.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Bacillaceae"
                     /db_xref="taxon:186817"
     Protein         1..265
                     /product="DUF6270 domain-containing protein"
                     /calculated_mol_wt=31746
     Region          7..240
                     /region_name="DUF6270"
                     /note="Family of unknown function (DUF6270); pfam19786"
                     /db_xref="CDD:466185"
ORIGIN      
        1 mayriavigs cvsrdvfnsn iipdykelye vvstvwqtsi psliskkiki tdedmelske
       61 lskhrlntlk rdikkthlke lieskpdfii idffadiryg yvklnsseny yltnnpngfr
      121 qtrfykekky gktynvhknk rfyeffynsf dkfynmvkee lpktviling fvesygyigp
      181 ekyplrydee tlsdihennk eylsiykhle enysditvie mskkiyfgdp dhmfgnapyh
      241 mtreyyndly nritqqvlkf eqnkq
//
LOCUS       WP_235250627             629 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Faecalicatena contorta].
ACCESSION   WP_235250627
VERSION     WP_235250627.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..629
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=70399
     Region          2..264
                     /region_name="PotC"
                     /note="ABC-type spermidine/putrescine transport system,
                     permease component II [Amino acid transport and
                     metabolism]; COG1177"
                     /db_xref="CDD:440790"
     Region          302..622
                     /region_name="PBP2_PotD_PotF_like_2"
                     /note="The periplasmic substrate-binding component of an
                     uncharacterized active transport system closely related to
                     spermidine and putrescine transporters; contains the type
                     2 periplasmic binding fold; cd13663"
                     /db_xref="CDD:270381"
     Site            order(308,504,507,530,532,568)
                     /site_type="other"
                     /note="putative chemical substrate binding site [chemical
                     binding]"
                     /db_xref="CDD:270381"
ORIGIN      
        1 mkkskrpfgk llmvlmivff ylpivymvif sfndgkslts ftgfslrwyr hmldsqdmme
       61 alyttfsial latfistvag tiaaiglsks kkiirdimdq vnnfpimnpe ivtaigfmll
      121 fitfriekgy vtmllahiaf cipyvmlsvm pkirsmdpnl adaamdlgat pwqaltkvvv
      181 pqitpgiisg aliaftmsvd dfiisyfvtg rgvknlsimv ytmskrvnps inaistlvvv
      241 iitialifin vgpliaakra srgrsgrkpy gsviavvcvl aivvgviqir nkeselpfeg
      301 qtlhiynwge ytgeniirdf enetgasvvm enfdsneqmy ikvangeayd ilvpsdymiq
      361 rlieedylqk ldqskldcld klddavknlp ydpgneysvp yfwgtvgivy dktkvdiadl
      421 eregynifld ekyrgeiyly dserdsfmma lkalgysmnt eseaeiqeay ewlvqcvqtm
      481 kpeivtdeii dnmaqgrkal gliysgdaty vmsenenmgy ympesgtnlw sdamvipkna
      541 anpelahafi nyasdyagay dnssyvgyts anrevmddla geggdfegin ayiprtdnpn
      601 devfvynedt kkiisnlwsk vkiaasnan
//
LOCUS       WP_235250727             360 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6017 domain-containing protein [Faecalicatena contorta].
ACCESSION   WP_235250727
VERSION     WP_235250727.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040303.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19481.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..360
                     /product="DUF6017 domain-containing protein"
                     /calculated_mol_wt=41825
     Region          19..94
                     /region_name="RepA_N"
                     /note="Replication initiator protein A (RepA) N-terminus;
                     pfam06970"
                     /db_xref="CDD:429221"
     Region          152..>252
                     /region_name="COG5075"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:227407"
     Region          <239..357
                     /region_name="DUF6017"
                     /note="Family of unknown function (DUF6017); pfam19481"
                     /db_xref="CDD:437313"
ORIGIN      
        1 makydvvfdy fhdyeseqfa fyripkalft ddyfrnlssd akvlyglmld rmalsiknrw
       61 idendrvyii ftleqvmqym ncgrdkgmkt laeldtkkgi gliervkqgf gkpdiiyvks
      121 fvmkqrqavn vpaeteepde yspqinevee tdlsqsekpt yrgrknrple vektdflrse
      181 kptyqgresr lvevgepdsn ntyynntdls dnerndtnli npscrqkknq pdqidvmdai
      241 eaytdiiksn ieyeylvegc rlgekeyide ivelivevis vkreavviag aeypyqfvkn
      301 kllkvnsshi qyvleclhdn ttkirnvksy lltcifnaps tinnyyraev nhdmygggnl
//
LOCUS       WP_235250733             192 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase, partial [Faecalicatena contorta].
ACCESSION   WP_235250733
VERSION     WP_235250733.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024573.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13175.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..>192
                     /product="AAA family ATPase"
     Region          2..>191
                     /region_name="AAA_15"
                     /note="AAA ATPase domain; pfam13175"
                     /db_xref="CDD:433011"
     Region          2..>48
                     /region_name="COG4938"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443965"
ORIGIN      
        1 mlhslelery kcyrdktkfe iapltilcgi nssgksaiik sllllmqsye nstatnevsf
       61 ngkycncgsf ddvifnregn sfsienefii snsmdkngna fnhqdivsyk elnkmyrdvc
      121 kysiekfrlk iqievvkfqd ssnpyiegnk iqryeiglla cnknidskew mcssiilnrv
      181 getnnkddmy is
//
LOCUS       WP_235250843             116 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: diguanylate cyclase domain-containing protein
            [Bacillaceae].
ACCESSION   WP_235250843
VERSION     WP_235250843.1
KEYWORDS    RefSeq.
SOURCE      Bacillaceae
  ORGANISM  Bacillaceae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales.
REFERENCE   1  (residues 1 to 116)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 116)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 116)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 116)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 116)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 116)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 116)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 116)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 116)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Bacillaceae"
                     /db_xref="taxon:186817"
     Protein         1..116
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=13335
     Region          <4..>86
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mprefivive esskneleni adriiqstsq pyfinkteaq vsvsigisly pndgetkeil
       61 lenadramyy aknngknrfk fytpdlmnid ppkegfiekw rntlqnslfk idkkgk
//
LOCUS       WP_235251025             308 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: S1 RNA-binding domain-containing protein
            [Lachnospiraceae].
ACCESSION   WP_235251025
VERSION     WP_235251025.1
KEYWORDS    RefSeq.
SOURCE      Lachnospiraceae
  ORGANISM  Lachnospiraceae
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales.
REFERENCE   1  (residues 1 to 308)
  AUTHORS   Bycroft,M., Hubbard,T.J., Proctor,M., Freund,S.M. and Murzin,A.G.
  TITLE     The solution structure of the S1 RNA binding domain: a member of an
            ancient nucleic acid-binding fold
  JOURNAL   Cell 88 (2), 235-242 (1997)
   PUBMED   9008164
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012784.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00575.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Lachnospiraceae"
                     /db_xref="taxon:186803"
     Protein         1..308
                     /product="S1 RNA-binding domain-containing protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /calculated_mol_wt=34498
     Region          <93..>299
                     /region_name="rpsA"
                     /note="ribosomal protein S1; TIGR00717"
                     /db_xref="CDD:273232"
     Region          <173..236
                     /region_name="rpsA"
                     /note="30S ribosomal protein S1; Reviewed; PRK06299"
                     /db_xref="CDD:235775"
ORIGIN      
        1 msnemitntt vltldsdtvl etaqskadli wheiqnayrt rkiltgmlgg iektetgsli
       61 aiiyykdfrt vipvtemmin lvqddahdyg elslrqnkil nnmlgceidf ivkgldaktr
      121 sivasrkeam lkkrqifyle kdangtpkvh edrvvqarvv avaekvvrae ifgvetsila
      181 rdlsfdwlgd arerfhvgdh ilvrilevnt edpehvtvra dvksvegnts kenmkkckvq
      241 gkyagtvedi hkgtvfvrls igvnaiahsc ydsrtvgkkd nvsfvvthid eernvavgii
      301 triikqnl
//
LOCUS       WP_235251048              99 aa            linear   BCT 02-MAR-2025
DEFINITION  M24 family metallopeptidase C-terminal domain-containing protein,
            partial [Faecalicatena contorta].
ACCESSION   WP_235251048
VERSION     WP_235251048.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16188.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         <1..99
                     /product="M24 family metallopeptidase C-terminal
                     domain-containing protein"
     Region          42..>83
                     /region_name="Peptidase_M24_C"
                     /note="C-terminal region of peptidase_M24; pfam16188"
                     /db_xref="CDD:465052"
ORIGIN      
        1 rvnkwtdlrs acaetrivsn glmrgltaln cgmggpetrn nhfepitlip mdldaimpem
       61 mseeekrlln eyhalvyekv spyleeeeke wlkkytrai
//
LOCUS       WP_235251054             145 aa            linear   BCT 02-MAR-2025
DEFINITION  MAE_28990/MAE_18760 family HEPN-like nuclease, partial
            [Faecalicatena contorta].
ACCESSION   WP_235251054
VERSION     WP_235251054.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 145)
  AUTHORS   Anantharaman,V., Makarova,K.S., Burroughs,A.M., Koonin,E.V. and
            Aravind,L.
  TITLE     Comprehensive analysis of the HEPN superfamily: identification of
            novel roles in intra-genomic conflicts, defense, pathogenesis and
            RNA processing
  JOURNAL   Biol Direct 8, 15 (2013)
   PUBMED   23768067
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037890.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18737.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         <1..145
                     /product="MAE_28990/MAE_18760 family HEPN-like nuclease"
     Region          <1..142
                     /region_name="HEPN_RiboL-PSP"
                     /note="RiboL-PSP-HEPN; cl39023"
                     /db_xref="CDD:476849"
ORIGIN      
        1 dvnesikalw rktilkatnd pnanfntflk kneeiiaail rnatlemnsr ntlpagnlng
       61 vsiretfesh giqiqtssqn yrpdildgik enrnnlahgs vsfvdavrsd sisdirrnek
      121 fvvafleeli dtvttyineq rykma
//
LOCUS       WP_235251089             384 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme [Faecalicatena
            contorta].
ACCESSION   WP_235251089
VERSION     WP_235251089.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..384
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /calculated_mol_wt=41921
     Region          2..375
                     /region_name="am_tr_V_EF2568"
                     /note="cysteine desulfurase family protein; TIGR01977"
                     /db_xref="CDD:131032"
ORIGIN      
        1 miymdnaatt mhkpqevida vvramssmgn agrganeasl sasrviydtr erlarlfgak
       61 darriaftnn steslniaik gilspgdhvi ttmlehnsvl rplyemekkg vkltivpsds
      121 mgrlnirdie eaitpdtkmi vctngsnltg nyidvkpige lahrhnvlfv vdasqtagvf
      181 pidvedmkid ilcftghkgl lgpqgtggiy vregveirpl ktggsgiqty skthpvqmpt
      241 aleagtlngh giaglhaale ylertgidei rareqrlmrr fyegvkdvpg vkiygdftqe
      301 nrcaivtlni geydssevsd ellteygist rpgghcaplm healgtveqg avrfsfshyn
      361 teeevdiair aihelaeepe petl
//
LOCUS       WP_235251116            1362 aa            linear   BCT 02-MAR-2025
DEFINITION  leucine-rich repeat protein, partial [Faecalicatena contorta].
ACCESSION   WP_235251116
VERSION     WP_235251116.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024702.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13306.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..1362
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         <1..>1362
                     /product="leucine-rich repeat protein"
     Region          172..265
                     /region_name="Pur_ac_phosph_N"
                     /note="Purple acid Phosphatase, N-terminal domain;
                     pfam16656"
                     /db_xref="CDD:465220"
     Region          275..478
                     /region_name="CpdA"
                     /note="3',5'-cyclic AMP phosphodiesterase CpdA [Signal
                     transduction mechanisms]; COG1409"
                     /db_xref="CDD:441019"
     Region          <679..754
                     /region_name="LRR_5"
                     /note="BspA type Leucine rich repeat region (6 copies);
                     pfam13306"
                     /db_xref="CDD:463839"
     Region          695..715
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          718..922
                     /region_name="LRR_5"
                     /note="BspA type Leucine rich repeat region (6 copies);
                     pfam13306"
                     /db_xref="CDD:463839"
     Region          720..742
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          743..764
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          765..862
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          863..887
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          886..1089
                     /region_name="LRR_5"
                     /note="BspA type Leucine rich repeat region (6 copies);
                     pfam13306"
                     /db_xref="CDD:463839"
     Region          888..909
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          910..930
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          1030..1050
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          1053..1256
                     /region_name="LRR_5"
                     /note="BspA type Leucine rich repeat region (6 copies);
                     pfam13306"
                     /db_xref="CDD:463839"
     Region          1055..1076
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          1077..1098
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          1099..1196
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          1197..1221
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          1222..1243
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          1244..1264
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          1278..1319
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
ORIGIN      
        1 giltihairn enastegenr iavidvdips glsngsalty nvvsgkvtyv sdkdasvint
       61 fatastripi iaaydinigt mlvgaengii tvtdvngnka snvevfvidd teeslgktnd
      121 dgilttdkfv dkvqsftvya kgdegysfpv kaqsysaant sdgtpyyiie navtngssmq
      181 siswmaspsc askkaiikyg tsednldttk egecvlksfs gsgdindnha vlinhvtits
      241 lksstdyyyq vgdgekwsdv khfstsagsk sdtnffvlgd tqtavgetgs ietineqian
      301 ssydfgiqtg daiespalys dwenflnvfg tgafsttdim hvignheqfg dngasaanti
      361 fdtpgdyysi eygnvyvatl syttdastlk nfaawlkeda sksdaswkil amhqpayytn
      421 veggsqiind yipeavdeag idivfsghdh syartkpmtn gmvdekngav yyicgstgek
      481 syavtanenf nfsiatqdyd aiylsvsann dsitvttynv sngtqsifdt ytlnkyhced
      541 enhtyvydse tntlkcsvcg yeinaedsky sgfatdkatg krmyfvsgqy mtghqylsgt
      601 hyyfddngla ydgeytigge tclftdgqyt scstadviia gicgtsaefv lyengefvis
      661 gtgaiekyvs ygvvpwyqyr tsvksviisa gitkltendf irctnlttvt feegskltti
      721 ngevfhgcts ltgiilpenv ttiygnafyg ctnlvsvylp ygvsyiapsa fknctnvvln
      781 vgkdsyaknf avtngiqyie rdkeaidsgt cgddvtwsys sggllvlsgs gamksyastn
      841 evpwytyrks iekvvigkdi tnisnyafad epglsevefe egsilskigg tafygsslke
      901 vtlpdtvtti yglafancsn lenvyipdgt sfigasafkn dskivlsvgm nsygkqfaet
      961 nnipyterga evlgsgtcgs eatwsyssdg iltisgsglm esyeatnkvp wytyrksilk
     1021 vligkditsi ssyafadepl lsevefeegs qltkiggtaf yssslkevvl pekvttiygl
     1081 afgncsnlen vyipdgtsfi gvsafkndpk ivlsvgmnsy gkqfaetnsi pytergaevl
     1141 gsgscgnelt wsyssegilt isgngamesy tssnvvpwyt yrksilkvvi gkditsisny
     1201 afadepllse vefeegsklt kiggtafygs slsevtlpea lttiyglafa ncsnltkiyi
     1261 pnsvsfiads tfrnssnvll svgyqsyakn yaerlslnyt ertietlasg scgetvtwtl
     1321 ttdgnltlsg ngtvenydsy kntpwyeyis kitkltvgkd it
//
LOCUS       WP_235251178             552 aa            linear   BCT 02-MAR-2025
DEFINITION  RNA-binding domain-containing protein [Faecalicatena contorta].
ACCESSION   WP_235251178
VERSION     WP_235251178.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 552)
  AUTHORS   Al-Marsoummi,S., Vomhof-DeKrey,E.E. and Basson,M.D.
  TITLE     Schlafens: Emerging Proteins in Cancer Cell Biology
  JOURNAL   Cells 10 (9), 2238 (2021)
   PUBMED   34571887
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 552)
  AUTHORS   Chen,J. and Kuhn,L.A.
  TITLE     Deciphering the three-domain architecture in schlafens and the
            structures and roles of human schlafen12 and serpinB12 in
            transcriptional regulation
  JOURNAL   J Mol Graph Model 90, 59-76 (2019)
   PUBMED   31026779
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016232.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04326.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..552
                     /product="RNA-binding domain-containing protein"
                     /calculated_mol_wt=61585
     Region          4..99
                     /region_name="COG2865"
                     /note="Predicted transcriptional regulator, contains HTH
                     domain [Transcription]"
                     /db_xref="CDD:442112"
     Region          300..382
                     /region_name="HATPase_c_4"
                     /note="Putative ATP-dependent DNA helicase recG
                     C-terminal; pfam13749"
                     /db_xref="CDD:463975"
     Region          415..477
                     /region_name="COG3432"
                     /note="Predicted transcriptional regulator
                     [Transcription]"
                     /db_xref="CDD:442658"
ORIGIN      
        1 mrtipkaesl diefksdlkc ypdhdlieei vgmtntsggf lflgveddgs itgvhkkhkd
       61 pigvtalian stvppiavra eiiteegkdv lkievprsrg vvstasgkml rrrikldgsp
      121 evipmysyei psrlaelgml dysaqplaga tlddldpnqr vrlrriiqnr pggektllsl
      181 pddeldvalr litdvagkyv ptvtgmllig keeriaelip taksafqvle gtavrmneds
      241 nkpllelfen yetyvkawnp ereteyglfr ipipefdwaa freglvnafc hrdytmlgav
      301 rvliddegmi isnpggfidg vnlknlltve phgrnpalad amkriglaek tgrgidrife
      361 gsiifgrpwp dysestsrtv klfiqrakad lpfakfvaee qnrqgkplsi ytlmilsvln
      421 terrctveri veltnlsenk vrsaievmie sglieasgkg knrtyilgkk iyrenketiq
      481 yvrqtdidsi rypelvmkla ntqngiitkq dvvellkvtp sqayavikkl qaegrlellc
      541 ggkyskykvi ns
//
LOCUS       WP_235251222             207 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: L-2-amino-thiazoline-4-carboxylic acid hydrolase
            [Lachnospiraceae].
ACCESSION   WP_235251222
VERSION     WP_235251222.1
KEYWORDS    RefSeq.
SOURCE      Lachnospiraceae
  ORGANISM  Lachnospiraceae
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales.
REFERENCE   1  (residues 1 to 207)
  AUTHORS   Tashima,I., Yoshida,T., Asada,Y. and Ohmachi,T.
  TITLE     Purification and characterization of a novel
            L-2-amino-Delta2-thiazoline-4-carboxylic acid hydrolase from
            Pseudomonas sp. strain ON-4a expressed in E. coli
  JOURNAL   Appl Microbiol Biotechnol 72 (3), 499-507 (2006)
   PUBMED   16550379
REFERENCE   2  (residues 1 to 207)
  AUTHORS   Ohmachi,T., Nishino,M., Kawata,M., Edo,N., Funaki,H., Narita,M.,
            Mori,K., Tamura,Y. and Asada,Y.
  TITLE     Identification, cloning, and sequencing of the genes involved in
            the conversion of D,L-2-amino-delta2-thiazoline-4-carboxylic acid
            to L-cysteine in Pseudomonas sp. strain ON-4a
  JOURNAL   Biosci Biotechnol Biochem 66 (5), 1097-1104 (2002)
   PUBMED   12092821
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025559.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14196.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Lachnospiraceae"
                     /db_xref="taxon:186803"
     Protein         1..207
                     /product="L-2-amino-thiazoline-4-carboxylic acid
                     hydrolase"
                     /calculated_mol_wt=24034
     Region          60..203
                     /region_name="ATC_hydrolase"
                     /note="L-2-amino-thiazoline-4-carboxylic acid hydrolase;
                     pfam14196"
                     /db_xref="CDD:464100"
ORIGIN      
        1 mknglmpqam wrcfqgsfmr emyrmskenp rkvmakarkc yqnilvdipe fekgdpfltn
       61 ilsaamlasv yleleekpnl eqvtdfyhha mtnnmimkcf lklgskytpk aqaklkrqge
      121 esvrrsernp ytwcfryetg rnincysaif thcgilyllk lldipeicpa mctydydmae
      181 lsgstfirkf tlaggepccd chwtrks
//
LOCUS       WP_235251288             490 aa            linear   BCT 02-MAR-2025
DEFINITION  DDE-type integrase/transposase/recombinase [Faecalicatena
            contorta].
ACCESSION   WP_235251288
VERSION     WP_235251288.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024997.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13610.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..490
                     /product="DDE-type integrase/transposase/recombinase"
                     /calculated_mol_wt=57112
     Region          <59..178
                     /region_name="YrdD"
                     /note="DNA topoisomerase I, ssDNA-binding Zn-finger and
                     Zn-ribbon domains [Replication, recombination and repair];
                     COG0551"
                     /db_xref="CDD:440317"
     Region          215..472
                     /region_name="Rve"
                     /note="Transposase (or an inactivated derivative), DDE
                     domain [Mobilome: prophages, transposons]; COG3316"
                     /db_xref="CDD:442545"
ORIGIN      
        1 mdiilyllqf iqyqhkqicw llnficryip lkqwafddsh spkyqkfkid elplitdfrq
       61 dwtykdlipy yekrygkkir pvsrrsvcdi pdtctcprcd apkpflyknn gskgqllckv
      121 cdarfspdes rfssvklrcp hcgntlvpkk drkhfivhkc vnpkcpyylh nlkkvdkedl
      181 kedygknkyk lhyiyreftm dffsmdlttl pknasslkfs khnahvmslc ltlhvnlgls
      241 lrktsqalkd lyninishqq ianycktaai cikpfvdqyp yekgdvftad etyikirgvk
      301 tyiwlimnaa traiigyqvs dnrgvgpcil amrmafqglt klpdnfkfia dgysayplaa
      361 mefvkkfgkd ftfkitqvig ltnddavste yrpfkqmier lnrtykasyr htngfdnidg
      421 anydlalwva yynflrphkh nnykvlneve mlqgadnmpg kwqlliflgq qtilnmqktg
      481 ttstersccq
//
LOCUS       WP_235251403             210 aa            linear   BCT 02-MAR-2025
DEFINITION  AraC family ligand binding domain-containing protein, partial
            [Faecalicatena contorta].
ACCESSION   WP_235251403
VERSION     WP_235251403.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 210)
  AUTHORS   Soisson,S.M., MacDougall-Shackleton,B., Schleif,R. and Wolberger,C.
  TITLE     Structural basis for ligand-regulated oligomerization of AraC
  JOURNAL   Science 276 (5311), 421-425 (1997)
   PUBMED   9103202
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02311.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..>210
                     /product="AraC family ligand binding domain-containing
                     protein"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
     Region          40..>97
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 msvkknvefr yyvipkdevv lplmgsiwnk eygegkerlh fhnyyevgic hegegemilg
       61 ereipfyagc vsiipqselh ttntfgkkay fewiyfdiye flneiypdde ilrenmryti
      121 ekqgklltpd mdirkiqfli kgiigefqsk dymyrdmvky mllmlvieiv rvlqkkdmpe
      181 rvlikrtdif paiahikeny nsvikigtla
//
LOCUS       WP_235250890             564 aa            linear   BCT 02-MAR-2025
DEFINITION  OPT/YSL family transporter [Faecalicatena contorta].
ACCESSION   WP_235250890
VERSION     WP_235250890.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 564)
  AUTHORS   Lubkowitz,M.A., Barnes,D., Breslav,M., Burchfield,A., Naider,F. and
            Becker,J.M.
  TITLE     Schizosaccharomyces pombe isp4 encodes a transporter representing a
            novel family of oligopeptide transporters
  JOURNAL   Mol Microbiol 28 (4), 729-741 (1998)
   PUBMED   9643541
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015148.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03169.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..564
                     /product="OPT/YSL family transporter"
                     /GO_function="GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=60674
     Region          <303..552
                     /region_name="OPT"
                     /note="OPT oligopeptide transporter protein; cl14607"
                     /db_xref="CDD:449333"
ORIGIN      
        1 maeekkkfns deelieyycs qehpkafnpa iivvilltsv lgaiigmeli vrfglstnss
       61 iigaliavii gmiplgftkk fknihtqniv etaiscatfg agnvlmvcvs viwvfdrpem
      121 ctgilvggvi afliditmmy wmfdtplmga neawpigiat aetilaaael gkkavllvtg
      181 ivagiagtwv glpmdiigvc glgnivalta fciglicngy weswfgytlg tyyvpqgvmv
      241 gagmialiqs ailirkkyke kseakkkeev ketteekett eekevyvysk taedmskalt
      301 kgmilyiiga ivmavigglv aemspvklvi wvvyamiaal vseilvgisa mhsgyfpama
      361 tviiflvlgm figfppeala flagyaactg pafadmgydl ktgwilrgkg knqkfevegr
      421 rqqyfaelmg aavaivavfi fyksyfmagr ippvaavyks tieagvdavv lryilifacl
      481 ggviqlvsgl krqigimfaa gllimnpkag vagliflavr liiekkfgee gtknlnvlsa
      541 gliagsalfs fftntfklvk kpte
//
LOCUS       WP_235251412             216 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase, partial [Faecalicatena contorta].
ACCESSION   WP_235251412
VERSION     WP_235251412.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
REFERENCE   1  (residues 1 to 216)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 216)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019348.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07728.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         <1..>216
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
     Region          6..202
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 vspmrnfllr gpagtgkteg akaiaaglhl pyrcitcsan teifdllgqi lpdvdgklss
       61 lqseypsfqd imldpatayq kltgiydeev tedvvykqli dtifdemheh yknqsshqkf
      121 kyvdtplvea irhgylvelq eptvianpgv lvglnslldr cnsvflpnge vikrhpdtti
      181 vvttnndyag ckqmnqsvis rmnlvidlee pdeetl
//
LOCUS       WP_235251433             122 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase, partial [Faecalicatena contorta].
ACCESSION   WP_235251433
VERSION     WP_235251433.1
KEYWORDS    RefSeq.
SOURCE      Faecalicatena contorta
  ORGANISM  Faecalicatena contorta
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Faecalicatena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024831.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13439.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Faecalicatena contorta"
                     /db_xref="taxon:39482"
     Protein         1..>122
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
     Region          4..>120
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mntrilylis nmrvsngvts vimnyvrklq gddfqldfis lynrespyie eikgkgcnlw
       61 vlpirkekid fidsyklmst ilktgnydiv hshltgkysv mlmklakhyh vpcrvlhshn
      121 pr
//
LOCUS       WP_235251507             420 aa            linear   BCT 02-MAR-2025
DEFINITION  polysaccharide deacetylase family protein [Niallia circulans].
ACCESSION   WP_235251507
VERSION     WP_235251507.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 420)
  AUTHORS   Freiberg,C., Fellay,R., Bairoch,A., Broughton,W.J., Rosenthal,A.
            and Perret,X.
  TITLE     Molecular basis of symbiosis between Rhizobium and legumes
  JOURNAL   Nature 387 (6631), 394-401 (1997)
   PUBMED   9163424
REFERENCE   2  (residues 1 to 420)
  AUTHORS   Mishra,C., Semino,C.E., McCreath,K.J., de la Vega,H., Jones,B.J.,
            Specht,C.A. and Robbins,P.W.
  TITLE     Cloning and expression of two chitin deacetylase genes of
            Saccharomyces cerevisiae
  JOURNAL   Yeast 13 (4), 327-336 (1997)
   PUBMED   9133736
REFERENCE   3  (residues 1 to 420)
  AUTHORS   Millward-Sadler,S.J., Poole,D.M., Henrissat,B., Hazlewood,G.P.,
            Clarke,J.H. and Gilbert,H.J.
  TITLE     Evidence for a general role for high-affinity non-catalytic
            cellulose binding domains in microbial plant cell wall hydrolases
  JOURNAL   Mol Microbiol 11 (2), 375-382 (1994)
   PUBMED   8170399
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013672.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01522.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..420
                     /product="polysaccharide deacetylase family protein"
                     /GO_function="GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=47261
     Region          46..172
                     /region_name="DUF4309"
                     /note="Domain of unknown function (DUF4309); pfam14172"
                     /db_xref="CDD:464097"
     Region          229..401
                     /region_name="CE4_NodB_like_6s_7s"
                     /note="Catalytic NodB homology domain of rhizobial
                     NodB-like proteins; cd10917"
                     /db_xref="CDD:213022"
     Site            order(234..237,287..292,325,327..328,349,355..356,379,381)
                     /site_type="other"
                     /note="NodB motif"
                     /db_xref="CDD:213022"
     Site            order(236..237,287,291,327..329,349,379,381)
                     /site_type="active"
                     /db_xref="CDD:213022"
ORIGIN      
        1 mlsvvvifqf ifivgcsaqk tkesenlqqs atnqeqknsd ltaeylsiiv nyakkgeads
       61 ssfnvfsstm qevkshwgep aktdhvgngy yatydekntv fgfttegkiy dirsynkqlk
      121 aislsdlkkv lgepaeirag kgeqilvysf seeiqlkfil snetekvdhl svyhpkivlp
      181 nednyildik gnsnqltana wntmqnwrnd ivkwkenqpn lyvngpnekk isltfddgpd
      241 tnvtpqvini lhnykvtgnf ffigseaeky pqvvknaydn gnvilshsyh hvdlttlske
      301 kqineitqag naihsiigke pamirppyge tnemlidnat tkgysiiiws idtldwsqme
      361 aeniiknvtd nlrngdiilm hsdsekteta kalpkiikav qergfeivgl dellgikayq
//
LOCUS       WP_235251535             420 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [Bacillaceae].
ACCESSION   WP_235251535
VERSION     WP_235251535.1
KEYWORDS    RefSeq.
SOURCE      Bacillaceae
  ORGANISM  Bacillaceae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Bacillaceae"
                     /db_xref="taxon:186817"
     Protein         1..420
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47239
     Region          12..404
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(22..23,26..27,30,61,116..117,119..121,124,144,
                     147..148,151,228,231..232,235..237,240,278,282,331..332,
                     336,340,356,359..360,363..364,367)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340887"
ORIGIN      
        1 mmktfsqlhi slrirmylqf vtsitssaii pyisvyfssl igttitgviv iivilsgiig
       61 aliggylsdr igrrkmmiia elgvgitylv iaafnspwin lpyisaglfm inlflngmff
      121 pastamihdl vlaeqrkfvf tamywlanla talgtitgaf ffmdyhfyff fsvglvsiis
      181 sfitylfike slmkrhdirn ahtskstiws nyqyvwkdqt fmlyllscll ifslenhltn
      241 yiaihlrdtm edtilfgilp vnginmvgil haentifvvf cvgmvtwmmk klsdykqyfi
      301 gmclfvvsyc iltyisspvw liiimlfisi gelmyvpinq siladlvnen yrssylalng
      361 ligqgqmila glaitisskl saltmslglf sfgivglllm gyvvkketns kkqvniteii
//
LOCUS       WP_235251551             168 aa            linear   BCT 02-MAR-2025
DEFINITION  spore germination protein GerPE [Niallia circulans].
ACCESSION   WP_235251551
VERSION     WP_235251551.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 168)
  AUTHORS   Behravan,J., Chirakkal,H., Masson,A. and Moir,A.
  TITLE     Mutations in the gerP locus of Bacillus subtilis and Bacillus
            cereus affect access of germinants to their targets in spores
  JOURNAL   J Bacteriol 182 (7), 1987-1994 (2000)
   PUBMED   10715007
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022423.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10970.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..168
                     /product="spore germination protein GerPE"
                     /calculated_mol_wt=18621
     Region          1..126
                     /region_name="GerPE"
                     /note="Spore germination protein GerPE; cl46707"
                     /db_xref="CDD:481047"
ORIGIN      
        1 mlqrtsvvdl invrtvsfss iieigdaiyh qavsraiavq rqkelfygke gayedyavfk
       61 epipltpiie nvechfenmk piikvhhidi tgisscsllq igncrhmyae arikhirqie
      121 qtissevgnn liqlnepsql gvptsqspvt vtgtdntgsp fsdveqeq
//
LOCUS       WP_235251634             197 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MerR family transcriptional regulator [Bacillaceae].
ACCESSION   WP_235251634
VERSION     WP_235251634.1
KEYWORDS    RefSeq.
SOURCE      Bacillaceae
  ORGANISM  Bacillaceae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Bacillaceae"
                     /db_xref="taxon:186817"
     Protein         1..197
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=22989
     Region          20..87
                     /region_name="MerR_1"
                     /note="MerR HTH family regulatory protein; pfam13411"
                     /db_xref="CDD:463870"
ORIGIN      
        1 mlsvqtkels ikdeqtklls vkeaaeyide gpgvlrnwlr elktlipvii gengyryfdq
       61 ksldilvkvk qlrnekqlsl rqiedeltcp vptsipiatd atekilqdlq tikeelelqk
      121 nfnqvlvqql kkqqehielq qehivsqekk itrlenpiih qdkednpaks rktkqnfine
      181 ketkqkksgf irlfsyr
//
LOCUS       WP_235251642             235 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: anthrax toxin lethal factor-related
            metalloendopeptidase [Bacillaceae].
ACCESSION   WP_235251642
VERSION     WP_235251642.1
KEYWORDS    RefSeq.
SOURCE      Bacillaceae
  ORGANISM  Bacillaceae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019357.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07737.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Bacillaceae"
                     /db_xref="taxon:186817"
     Protein         1..235
                     /product="anthrax toxin lethal factor-related
                     metalloendopeptidase"
                     /EC_number="3.4.24.-"
                     /calculated_mol_wt=26303
     Region          52..234
                     /region_name="M34_PPEP"
                     /note="Pro-Pro endopeptidase (PPEP) and similar proteins;
                     belongs to peptidase family M34; cd20183"
                     /db_xref="CDD:380333"
ORIGIN      
        1 mrwlkriapl cmiaatsilm gnsqlpnnei ylknlselti ikanlsleak enlgnmiilp
       61 eesydqeeaa aiierlnqlp stllnkvqss gikvklftgk ltdnktaqkf agiiprgyts
      121 qktwddvpgi gggkvvlvki gasekgqghs svnleyhela hsidykvlnn askteayrlv
      181 wneekgklfp nrqyflqyae eyfaetfamf ymggkeketl sqlapktyqy iatiq
//
LOCUS       WP_235251698             390 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-ketoacyl synthase N-terminal-like domain-containing protein
            [Niallia circulans].
ACCESSION   WP_235251698
VERSION     WP_235251698.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 390)
  AUTHORS   Huang,W., Jia,J., Edwards,P., Dehesh,K., Schneider,G. and
            Lindqvist,Y.
  TITLE     Crystal structure of beta-ketoacyl-acyl carrier protein synthase II
            from E.coli reveals the molecular architecture of condensing
            enzymes
  JOURNAL   EMBO J 17 (5), 1183-1191 (1998)
   PUBMED   9482715
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012337.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00109.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..390
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /calculated_mol_wt=41896
     Region          4..382
                     /region_name="FabB"
                     /note="3-oxoacyl-(acyl-carrier-protein) synthase [Lipid
                     transport and metabolism, Secondary metabolites
                     biosynthesis, transport and catabolism]; COG0304"
                     /db_xref="CDD:440073"
ORIGIN      
        1 mksvitgmgi igagfsnike yttvlknnks mlkqeeyegk yiytgrvhee qliklsrkqe
       61 kmskpvrmll qacneaigqs kinvryyrta vivgssaggl adiskaaiss ekgkrlspyt
      121 ignmnansls ssisaylein glslslansc tsgidalnla rmliesnqid vcivgasdes
      181 vcdtvikgfl phrvlqigrh pqplfgpfsg gkgfsisega gvliveneri anqrnasilg
      241 kveatsvtqd avspyqsdst gllmqkavae clqenlptyi nsqalgilen dhidigvyqr
      301 ffetnqipit sikgtvgham gasplfqiia slisisnrfi patisaeida yyrnypintm
      361 lleqeidrvl itahgyggnn gcamiakgga
//
LOCUS       WP_235251762             333 aa            linear   BCT 02-MAR-2025
DEFINITION  M14 family zinc carboxypeptidase [Niallia circulans].
ACCESSION   WP_235251762
VERSION     WP_235251762.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012471.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00246.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..333
                     /product="M14 family zinc carboxypeptidase"
                     /GO_function="GO:0004181 - metallocarboxypeptidase
                     activity [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=38121
     Region          80..311
                     /region_name="Peptidase_M14_like"
                     /note="M14 family of metallocarboxypeptidases and related
                     proteins; cl11393"
                     /db_xref="CDD:472171"
     Site            order(87,90,163,172..173,224..225,230,286)
                     /site_type="active"
                     /db_xref="CDD:349427"
ORIGIN      
        1 mkrrliillt vclflyaypk qysaesiida sneytyedyq ediwilksky kkqlqvhtig
       61 ksefgrkiya iqigtgeksv llsgahhgre witslltmkm aediavnmkn genylgsysi
      121 wivpminpdg vtiqqgrink fpffskrkik kmndglddft rwksnglgvd lnrqypagwe
      181 nlqdskkeps yknykgkapf eakevkaive ltekikpiia vayhssgqei fwqynngvne
      241 erdrmiaevl aqetgyklgt ppndavgggy tdwfintyhl paftieicpi vdeknpsltn
      301 fpeawernkt ipktlieeak kidaihkkml gdk
//
LOCUS       WP_235251821             129 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Niallia circulans].
ACCESSION   WP_235251821
VERSION     WP_235251821.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 129)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 129)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..129
                     /product="VOC family protein"
                     /calculated_mol_wt=15043
     Region          7..122
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mikykslhhv sltvtsleka kyfyekilcl kelqrpdfdf pgawyqienq qlhlivypes
       61 qtirtnktln skeghfalrv enyydtlnwl kqnnieiiek pygvsgfaqi fcadpdgnli
      121 elnvdqmdl
//
LOCUS       WP_235251985             255 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Niallia circulans].
ACCESSION   WP_235251985
VERSION     WP_235251985.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 255)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 255)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..255
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=30085
     Region          4..101
                     /region_name="DUF5613"
                     /note="Domain of unknown function (DUF5613); pfam18467"
                     /db_xref="CDD:436523"
     Region          <165..244
                     /region_name="PhnO"
                     /note="N-acetyltransferase, GNAT superfamily (includes
                     histone acetyltransferase HPA2) [Transcription, General
                     function prediction only]; COG0454"
                     /db_xref="CDD:440222"
ORIGIN      
        1 mekvtysnih kegkqimesi nwihvhneem llqydsnfiq fktmptisef eqaeeylkvf
       61 hqktgqkhlk fifpenqkft kelqehivsk cyydvgftel yainprefpv lspiediliq
      121 kvtevnfedy lqleynqdlk ygidyakgkt evyrknfsnp hflqiiayyk gkgagalevi
      181 lgyktveidg ifvideyqrk giaarmqkmv mdlfpdktii lladgedtpk emykkqnyqk
      241 qgfqyealke kfdvl
//
LOCUS       WP_235252062             220 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF1801 domain-containing protein [Bacillaceae].
ACCESSION   WP_235252062
VERSION     WP_235252062.1
KEYWORDS    RefSeq.
SOURCE      Bacillaceae
  ORGANISM  Bacillaceae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales.
REFERENCE   1  (residues 1 to 220)
  AUTHORS   Albrecht,A.G., Landmann,H., Nette,D., Burghaus,O., Peuckert,F.,
            Seubert,A., Miethke,M. and Marahiel,M.A.
  TITLE     The frataxin homologue Fra plays a key role in intracellular iron
            channeling in Bacillus subtilis
  JOURNAL   Chembiochem 12 (13), 2052-2061 (2011)
   PUBMED   21744456
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020397.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08818.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Bacillaceae"
                     /db_xref="taxon:186817"
     Protein         1..220
                     /product="DUF1801 domain-containing protein"
                     /calculated_mol_wt=25453
     Region          7..198
                     /region_name="YdeI"
                     /note="Uncharacterized conserved protein YdeI,
                     YjbR/CyaY-like superfamily, DUF1801 family [Function
                     unknown]; COG4430"
                     /db_xref="CDD:443542"
     Region          <199..215
                     /region_name="zf-CDGSH"
                     /note="Iron-binding zinc finger CDGSH type; cl02748"
                     /db_xref="CDD:470664"
ORIGIN      
        1 manrklnpkv eeflskdspw keeyvklrqi vleceelvee fkwmhpcyti knknivlihg
       61 fkeycallfh kgallkdpqg iliqqtenvq aarqirftsl qdivklesvi keyiheaiev
      121 eksglevtik ehkeyiipee letkfeeipe lktafealtp grqrayilhf sqpkqsktrv
      181 ariekameri lngkglndci cglsqkmpnc dgshkfvgkk
//
LOCUS       WP_235252093             196 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6470 family protein [Bacillaceae].
ACCESSION   WP_235252093
VERSION     WP_235252093.1
KEYWORDS    RefSeq.
SOURCE      Bacillaceae
  ORGANISM  Bacillaceae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039791.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20074.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Bacillaceae"
                     /db_xref="taxon:186817"
     Protein         1..196
                     /product="DUF6470 family protein"
                     /calculated_mol_wt=21859
     Region          6..182
                     /region_name="DUF6470"
                     /note="Family of unknown function (DUF6470); pfam20074"
                     /db_xref="CDD:437906"
ORIGIN      
        1 mnfpqiriqs tpaklglitn psnvlmeqpk anqrieqpsa evtidripsk liidqteaka
       61 dvgiktrtrv lqeyvqkgkq ewlkgivrrv rdgaelaaiq nkgnpiaaia kkngtkemkq
      121 fgigwipsan svkinydpge viisvkinkp iienkqnkpi veytpgnvev kliqypslei
      181 dfenlkyvgv nyeqsi
//
LOCUS       WP_235252131             677 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: 5'-nucleotidase C-terminal domain-containing protein
            [Bacillaceae].
ACCESSION   WP_235252131
VERSION     WP_235252131.1
KEYWORDS    RefSeq.
SOURCE      Bacillaceae
  ORGANISM  Bacillaceae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales.
REFERENCE   1  (residues 1 to 677)
  AUTHORS   Knofel,T. and Strater,N.
  TITLE     X-ray structure of the Escherichia coli periplasmic 5'-nucleotidase
            containing a dimetal catalytic site
  JOURNAL   Nat Struct Biol 6 (5), 448-453 (1999)
   PUBMED   10331872
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014871.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02872.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Bacillaceae"
                     /db_xref="taxon:186817"
     Protein         1..677
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /GO_process="GO:0009166 - nucleotide catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=73161
     Region          36..533
                     /region_name="UshA"
                     /note="2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or
                     3'-nucleotidase, 5'-nucleotidase family [Nucleotide
                     transport and metabolism, Defense mechanisms]; COG0737"
                     /db_xref="CDD:440500"
     Region          642..670
                     /region_name="LPXTG_anchor"
                     /note="LPXTG-motif cell wall anchor domain; TIGR01167"
                     /db_xref="CDD:273478"
ORIGIN      
        1 mkgkkhftfl lsaittlall vsivlpasty aeensdsfkl timhmndtha hadllpnmmt
       61 aikevrtedp eallfnagdv fsgtlyfney hgkadlalln mmdldamvfg nhefdlgsse
      121 nghkslsefv saakfpllgt nvdfssdafm nklvkneftd spedgkvfdg mvkevngeki
      181 gifglttedt anisspvnvk flnyikeaer avqafeemgi nkivavthlg ydsnpdfgnd
      241 lqlatyvdgi dvvvgghsht qlsepvvvnk dekgtekept vvvqayqysq llgklqvefd
      301 gngvvigqag qlidvaskee dseaaailap ykekitelst qesgaiakkt lanprltdsd
      361 vsvranetel gnlvtdamla kakerypetv iafqngggir aaieegpiti geiisvlpfg
      421 ndpvvvelsg eeikqilehs vsqapaesgg flhvagmkft ydstkesgsr vismyvkvng
      481 eyqeiqanqk ylvttnnfta kggdgfdvfa kayqegrvqd igeidweqlr kymvedlggv
      541 adpvlegrit dllgtdpetp gdeeeevtpe epevenpetg gneddssdtd nptdatgset
      601 dddntdigdn agiendtele qdvndnqgsk etvsnssegn alpntatsmy tmllvggill
      661 vagigflvfr mmkyska
//
LOCUS       WP_235252125            1141 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: glycoside hydrolase family 2 TIM barrel-domain
            containing protein [Bacillaceae].
ACCESSION   WP_235252125
VERSION     WP_235252125.1
KEYWORDS    RefSeq.
SOURCE      Bacillaceae
  ORGANISM  Bacillaceae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales.
REFERENCE   1  (residues 1 to 1141)
  AUTHORS   Jacobson,R.H., Zhang,X.J., DuBose,R.F. and Matthews,B.W.
  TITLE     Three-dimensional structure of beta-galactosidase from E. coli
  JOURNAL   Nature 369 (6483), 761-766 (1994)
   PUBMED   8008071
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02836.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Bacillaceae"
                     /db_xref="taxon:186817"
     Protein         1..1141
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=130069
     Region          4..748
                     /region_name="GalB"
                     /note="beta-galactosidase GalB; NF041463"
                     /db_xref="CDD:469351"
     Region          1018..1139
                     /region_name="CBM6_xylanase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); many are
                     appended to glycoside hydrolase (GH) family 11 and GH43
                     xylanase domains; cd04084"
                     /db_xref="CDD:271150"
     Site            order(1037,1047..1048,1133)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:271150"
ORIGIN      
        1 mnmktlfndk wefaktslev edsrnldfvp idlphdwliy ntldlyessi gwyrksffys
       61 kqqgeqvlls fdgvymdstm yinnqfvgew kngyssfehd itaamvdgkn nilvkvvyes
      121 pnsrwysgag iyrnvwlktr dtnhlvtdgi yitmnqedtr whvevetela ldqdvqlshs
      181 iffknqrias vsetidfgke nsvlnqqkli vdnpllwsid epnlyqlqte lqiinqelkt
      241 veaitqnigf rniildskqg fhlngkrmkl ngvcehhdlg algaafnkqa lkrrfeilke
      301 mgvnairtah nmpakelmdl ademgflvis eafdmwerpk tkydyarffk ewapidvksw
      361 vkrdrnhpsl lmwsigneiy dthadergqe ltrklmaevh kydpkqnawm tigsnympwe
      421 naqkcadivk vagynygeky yqkhheehpd wiiygsetas vvqsrgiyhf pyeqsiladd
      481 deqcsalgns stswgakste asiiadrdav fslgtfiwtg fdyigeptpy htknayfgqi
      541 dtatfkkdsf yiyqaewtdy rekpmvhlfp ywdfsegqmi dvrvcsnapk velqlngnki
      601 gthvidhekg telvgwwkip yekgqltaia ydekgniiat dtkssfddak kiclnadkri
      661 ltangtdiaf ieiatkdqdg nlvenatnrv nvnvtgagrl igldngdstd ydqykglsrr
      721 lfsgklmaii aattepgkiq ievnskgles acleidaqpa ednelvgisa tmkntdtpiv
      781 mgeegeiplr kieiisesgq lfdptktdif vhaklipadt syrevkwsvv ndagiesnis
      841 kvevagdkvk vsalgdgefr lrctskngtd ktkliselef kaaglgkayk dpygfisagl
      901 ydytkgevtn gnergvatsr dgetqvgfre idfgnygsdk itmpifslsd eeypiqiweg
      961 mpdeegsell adviyqkpsk wnvyqeetfq lskrlrgiks lcfilhqkvh ikgfyfekkn
     1021 qafernyase cnhiygdtfe vkencvegig nnvsltfeqf dftetgatkl iisgkspiek
     1081 ntihirfanq egesnqmvef lysvgyeerv fdlekitgiq kvtfvflpgs nfdfewfqfk
     1141 r
//
LOCUS       WP_235252203             459 aa            linear   BCT 02-MAR-2025
DEFINITION  TniQ family protein [Niallia circulans].
ACCESSION   WP_235252203
VERSION     WP_235252203.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 459)
  AUTHORS   Kholodii,G.Y., Mindlin,S.Z., Bass,I.A., Yurieva,O.V.,
            Minakhina,S.V. and Nikiforov,V.G.
  TITLE     Four genes, two ends, and a res region are involved in
            transposition of Tn5053: a paradigm for a novel family of
            transposons carrying either a mer operon or an integron
  JOURNAL   Mol Microbiol 17 (6), 1189-1200 (1995)
   PUBMED   8594337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018259.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06527.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..459
                     /product="TniQ family protein"
                     /calculated_mol_wt=53774
     Region          26..162
                     /region_name="TniQ"
                     /note="pfam06527"
                     /db_xref="CDD:461938"
     Region          <252..294
                     /region_name="XRE"
                     /note="DNA-binding transcriptional regulator, XRE-family
                     HTH domain [Transcription]; COG1476"
                     /db_xref="CDD:441085"
     Region          339..>384
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
ORIGIN      
        1 myehlfitpr svlyniepig tgsefveslt sylarvafeh ntsvghlvnk llipsmdkdy
       61 lhrsrdfggn rfyegaktin gymenslsvv kaiekltvrd dihkltlirw knvfplrell
      121 kkslawcpfc ikewkennkt vyypliwsid lvhmchihsc flinkcptcf kqqdilrrqs
      181 lvgicqhclr qlddgatkek ygqenkdwqg fvidnvcsll nydgkintge nsllvknlnl
      241 icekvfdgsi nefskqlnfa rssvvgwikg kvkptlenql yicqrlniei eqlllttniq
      301 nfhivkqrkr iintsskpkr vdyyivekel ekviqnkeni smeaaakkvg inkrtlyrkf
      361 rhlcvqisnh ykqyleerkl qrilclkiqv eatftnlymq giypsrrkie fvmnkpgvlk
      421 erelqshwkg llgkqgllfe rnlgecckra qyfrysfph
//
LOCUS       WP_235252163             264 aa            linear   BCT 02-MAR-2025
DEFINITION  TnsA endonuclease N-terminal domain-containing protein [Niallia
            circulans].
ACCESSION   WP_235252163
VERSION     WP_235252163.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 264)
  AUTHORS   M Iyer,L., Anantharaman,V., Krishnan,A., Burroughs,A.M. and
            Aravind,L.
  TITLE     Jumbo Phages: A Comparative Genomic Overview of Core Functions and
            Adaptions for Biological Conflicts
  JOURNAL   Viruses 13 (1), 63 (2021)
   PUBMED   33466489
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 264)
  AUTHORS   Benler,S., Hung,S.H., Vander Griend,J.A., Peters,G.A., Rohwer,F.
            and Segall,A.M.
  TITLE     Gp4 is a nuclease required for morphogenesis of T4-like
            bacteriophages
  JOURNAL   Virology 543, 7-12 (2020)
   PUBMED   32056848
REFERENCE   3  (residues 1 to 264)
  AUTHORS   Steczkiewicz,K., Muszewska,A., Knizewski,L., Rychlewski,L. and
            Ginalski,K.
  TITLE     Sequence, structure and functional diversity of PD-(D/E)XK
            phosphodiesterase superfamily
  JOURNAL   Nucleic Acids Res 40 (15), 7016-7045 (2012)
   PUBMED   22638584
REFERENCE   4  (residues 1 to 264)
  AUTHORS   Hickman,A.B., Li,Y., Mathew,S.V., May,E.W., Craig,N.L. and Dyda,F.
  TITLE     Unexpected structural diversity in DNA recombination: the
            restriction endonuclease connection
  JOURNAL   Mol Cell 5 (6), 1025-1034 (2000)
   PUBMED   10911996
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020305.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08722.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..264
                     /product="TnsA endonuclease N-terminal domain-containing
                     protein"
                     /calculated_mol_wt=31198
     Region          25..256
                     /region_name="TnsA_endonuclease-like"
                     /note="Transposon Tn7 transposition protein TnsA; cd22362"
                     /db_xref="CDD:411766"
     Site            order(60,79,114,132,134)
                     /site_type="active"
                     /db_xref="CDD:411766"
     Site            order(63,66..67,70,73,95..97,119,126,129,142,145..146,
                     148..149,152..153,163..166,168..169)
                     /site_type="other"
                     /note="TnsC binding interface [polypeptide binding]"
                     /db_xref="CDD:411766"
ORIGIN      
        1 makqwskekl erylkegrgq geganylpwr ytyeyssrgr vsrvlglktg rihhlqsdnq
       61 yraflifefn snvtdirety plldvqevid dkddlrfdkf adketkepyv latnflltlk
      121 dtggkekyla rtvknttelk rkitfeklei errywhqkni dwkvitekql prqlakniew
      181 vretllegse eslnkeelsl sllkflieng elplrevlkl fdktlgiekg sglflfryll
      241 akkefrldmt klidfsakvi dlml
//
LOCUS       WP_235252274             227 aa            linear   BCT 02-MAR-2025
DEFINITION  YetF domain-containing protein [Niallia circulans].
ACCESSION   WP_235252274
VERSION     WP_235252274.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016154.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04239.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..227
                     /product="YetF domain-containing protein"
                     /calculated_mol_wt=26009
     Region          1..181
                     /region_name="YcaP"
                     /note="Uncharacterized membrane protein YcaP, DUF421
                     family [Function unknown]; COG2323"
                     /db_xref="CDD:441897"
     Region          169..>211
                     /region_name="DUF421"
                     /note="Protein of unknown function (DUF421); cl00990"
                     /db_xref="CDD:470022"
ORIGIN      
        1 mefkhifsel iigyflllll tkilgktqit qittfdfvsv lvlgelvgna mydtetgike
       61 itysillwga liyvtefitq kfrktrqlfe gkpsivinkg kidfhelkkn hldinqlqhl
      121 lrakdvfsia ecayailetd gtisvlkksa ysnptkqdmk ipietislpi svildgeiir
      181 enlprigwse dqlmqelknq nipsykdily aewregsply vqsydmk
//
LOCUS       WP_235252038              38 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: YfhE family protein [Bacillaceae].
ACCESSION   WP_235252038
VERSION     WP_235252038.1
KEYWORDS    RefSeq.
SOURCE      Bacillaceae
  ORGANISM  Bacillaceae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales.
REFERENCE   1  (residues 1 to 38)
  AUTHORS   Price,C.W., Fawcett,P., Ceremonie,H., Su,N., Murphy,C.K. and
            Youngman,P.
  TITLE     Genome-wide analysis of the general stress response in Bacillus
            subtilis
  JOURNAL   Mol Microbiol 41 (4), 757-774 (2001)
   PUBMED   11532142
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025517.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14152.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..38
                     /organism="Bacillaceae"
                     /db_xref="taxon:186817"
     Protein         1..38
                     /product="YfhE family protein"
                     /calculated_mol_wt=4420
     Region          2..36
                     /region_name="YfhE"
                     /note="YfhE-like protein; pfam14152"
                     /db_xref="CDD:372931"
ORIGIN      
        1 mdrkkkqkqk htlssmqavt yqhefkmadr aasrkdnk
//
LOCUS       WP_235252308             337 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF3231 family protein [Niallia].
ACCESSION   WP_235252308
VERSION     WP_235252308.1
KEYWORDS    RefSeq.
SOURCE      Niallia
  ORGANISM  Niallia
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022986.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11553.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Niallia"
                     /db_xref="taxon:2837506"
     Protein         1..337
                     /product="DUF3231 family protein"
                     /calculated_mol_wt=38105
     Region          10..150
                     /region_name="DUF3231"
                     /note="Protein of unknown function (DUF3231); pfam11553"
                     /db_xref="CDD:402931"
     Region          172..330
                     /region_name="DUF3231"
                     /note="Protein of unknown function (DUF3231); pfam11553"
                     /db_xref="CDD:402931"
ORIGIN      
        1 mkknshhvel ttaeianlwt qymndslsic ilthsiekae dkdikeillf alklaeshiv
       61 kitnffnqen fpipkdfile edvnlnapsi ftdvfiiayl hvmallgltg yagavasssr
      121 edqldyfikc nnetmelhkq ivdvmlnkgl ysktsrinrp nqvdfvddqn ylagwfgikr
      181 plsvieisgm sfnmkkdvvk tvlelgfaqv cqtkeiqkyf ergkkiclnh ftifnnmltk
      241 edlsspktwv sevtnstvsp fsdklmlyhi vtlvsaavgy ygaglavsqr rdiaaeyarf
      301 iaevglyaed gcellikhgw leqppladnr edlankk
//
LOCUS       WP_235252328             495 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Niallia circulans].
ACCESSION   WP_235252328
VERSION     WP_235252328.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..495
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=53331
     Region          7..75
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
     Region          106..450
                     /region_name="AraJ"
                     /note="Predicted arabinose efflux permease AraJ, MFS
                     family [Carbohydrate transport and metabolism]; COG2814"
                     /db_xref="CDD:442063"
ORIGIN      
        1 mtsayrisml vndqpgvlar isslfgthhv niediktkny kreattriqi sssaeekqvq
       61 tlliglqglm dvvevdadai hksafqqkli qstdtiqvlr eqktlskkis ywlvacslfl
      121 tlfgtnipas lyslyraewg ltsgmitlvf siyaftvipa iviagqlsdq igkkkvlipg
      181 iffsligtfc ftianglgml llgrlfqgls vgilngvava alteldekkn tkktalical
      241 avtlgnafgp ilsgllgdfa piplrlsyyv hllfiipcfi llfflnenir pglkpvqlkk
      301 pfvpkeimkp fllasltsfv awsiismfms lipsnlssft tvtsltisgi vvalgliaaa
      361 lnqillkqls lmklitigya flavglvllv itiytqsltl llisavligg gngpayagsl
      421 alvnevapsk tkgnivstff vitylgvslp viglgylsqa fgvagavtty vlimgtlill
      481 isgfawkerk tiftk
//
LOCUS       WP_235252392             547 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Niallia circulans].
ACCESSION   WP_235252392
VERSION     WP_235252392.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 547)
  AUTHORS   Mande,S.S., Sarfaty,S., Allen,M.D., Perham,R.N. and Hol,W.G.
  TITLE     Protein-protein interactions in the pyruvate dehydrogenase
            multienzyme complex: dihydrolipoamide dehydrogenase complexed with
            the binding domain of dihydrolipoamide acetyltransferase
  JOURNAL   Structure 4 (3), 277-286 (1996)
   PUBMED   8805537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07992.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..547
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=59802
     Region          14..432
                     /region_name="Pyr_redox_2"
                     /note="Pyridine nucleotide-disulphide oxidoreductase;
                     cl39093"
                     /db_xref="CDD:476868"
     Region          450..542
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            509
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238089"
ORIGIN      
        1 mkiiiigsva agtsvaakar rndeqaeitl ynadydisys acgipyflgg eidelktltp
       61 rnpawfkkry nvdifirhev tsinaeakki ivknlntnev kednydvlvf atgaspntpe
      121 mngvkmehvf qirtiqntka iekfmkekqp ekvtiigagy iglemaeqlk trgldvtlvq
      181 rsnqvmshld kdmairveeh lvkkgvklfl neeitaiket eihsksgkvi eadmvilatg
      241 vrpntqlaea igvnigqsga iavnskmqtn ipdvyavgdv aesyslitgk plyrplgsta
      301 nkmgriagdv itggslehrg ilgtgilrvf dlavgqtgmt ekealeegys ieilhnikpa
      361 raeylggkdl iikaiadrqt grilgvqivg eegvdkrmdv fvtaitfqak aedlfhldla
      421 yappfsttkd pvmytgmalq naiekknkli npsdlserin ngeaiqvidt rsakqfqasc
      481 vdsainialg dlreksknld pllptvtycn sgttgnaaqn vlrnlgyndi ynlsggnkny
      541 qtfkksk
//
LOCUS       WP_235252460             172 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Oenococcus oeni].
ACCESSION   WP_235252460
VERSION     WP_235252460.1
KEYWORDS    RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Oenococcus oeni"
                     /db_xref="taxon:1247"
     Protein         1..172
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=19917
     Region          <35..130
                     /region_name="GlxA"
                     /note="Transcriptional regulator GlxA, contains an amidase
                     domain and an AraC-type DNA-binding HTH domain
                     [Transcription]; COG4977"
                     /db_xref="CDD:444002"
ORIGIN      
        1 mrdyltsall iqlfnsyisn syineedsra sfikewirah isstltvpgi akqlelnpdy
       61 ltrifkkctg mtmlqylnhl kievattllv rtemsvkqis srayfndskv firkfhqelv
      121 lspteyrksy hlihlnnphi dpqipipkdi adsidfipen gnikendflv kk
//
LOCUS       WP_235252593             136 aa            linear   BCT 02-MAR-2025
DEFINITION  AEC family transporter [Oenococcus oeni].
ACCESSION   WP_235252593
VERSION     WP_235252593.1
KEYWORDS    RefSeq.
SOURCE      Oenococcus oeni
  ORGANISM  Oenococcus oeni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Oenococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015509.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03547.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Oenococcus oeni"
                     /db_xref="taxon:1247"
     Protein         1..136
                     /product="AEC family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=14869
     Region          <5..136
                     /region_name="YfdV"
                     /note="Predicted permease, AEC (auxin efflux carrier)
                     family [General function prediction only]; COG0679"
                     /db_xref="CDD:440443"
ORIGIN      
        1 mgtdfalils lfgitlspiw qknfsvlgga tggmalfsig iilyvkkpkl nlavwmntls
       61 rtvfvplvif lvmmffkvdr svinmttmtm gitvaaisti fanqykvaeq emastlflsn
      121 iisifsmgli ivflki
//
LOCUS       WP_235251915             226 aa            linear   BCT 02-MAR-2025
DEFINITION  CpsB/CapC family capsule biosynthesis tyrosine phosphatase [Niallia
            circulans].
ACCESSION   WP_235251915
VERSION     WP_235251915.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 226)
  AUTHORS   Kim,H.S., Lee,S.J., Yoon,H.J., An,D.R., Kim,D.J., Kim,S.J. and
            Suh,S.W.
  TITLE     Crystal structures of YwqE from Bacillus subtilis and CpsB from
            Streptococcus pneumoniae, unique metal-dependent tyrosine
            phosphatases
  JOURNAL   J Struct Biol 175 (3), 442-450 (2011)
   PUBMED   21605684
REFERENCE   2  (residues 1 to 226)
  AUTHORS   Hagelueken,G., Huang,H., Mainprize,I.L., Whitfield,C. and
            Naismith,J.H.
  TITLE     Crystal structures of Wzb of Escherichia coli and CpsB of
            Streptococcus pneumoniae, representatives of two families of
            tyrosine phosphatases that regulate capsule assembly
  JOURNAL   J Mol Biol 392 (3), 678-688 (2009)
   PUBMED   19616007
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039343.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19567.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..226
                     /product="CpsB/CapC family capsule biosynthesis tyrosine
                     phosphatase"
                     /EC_number="3.1.3.48"
                     /GO_function="GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA]"
                     /GO_function="GO:0030145 - manganese ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /calculated_mol_wt=26295
     Region          1..223
                     /region_name="YwqE"
                     /note="Tyrosine-protein phosphatase YwqE [Signal
                     transduction mechanisms]; COG4464"
                     /db_xref="CDD:443561"
ORIGIN      
        1 midvncfifs hihneedyle knlnivkkaf eqgiqtiiat ssvtenksle rkinnlkerm
       61 kkeeinlqmi veplviidht yrnkrnqnsn hmenrnlfiy lssyemplhl tetlfnyqin
      121 gnriilsspe typfflinpe elyslakkgi liqlsaasia gkngwrakrl atelikrnma
      181 hfvgsnaqse qgllldkayn finkyygrey tgyfqknakt iteykn
//
LOCUS       WP_235252607              91 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Niallia circulans].
ACCESSION   WP_235252607
VERSION     WP_235252607.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..91
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=10186
     Region          7..>71
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mekalgkvtc fitrikkhnk lelllikhpn agiqipagtv einedfqqaa wreaveetgl
       61 kdfvscrsig kqeqilvdky itqlshtklg r
//
LOCUS       WP_235252640              38 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF4023 family protein [Bacillaceae].
ACCESSION   WP_235252640
VERSION     WP_235252640.1
KEYWORDS    RefSeq.
SOURCE      Bacillaceae
  ORGANISM  Bacillaceae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024613.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13215.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..38
                     /organism="Bacillaceae"
                     /db_xref="taxon:186817"
     Protein         1..38
                     /product="DUF4023 family protein"
                     /calculated_mol_wt=4437
     Region          4..36
                     /region_name="DUF4023"
                     /note="Protein of unknown function (DUF4023); pfam13215"
                     /db_xref="CDD:372519"
ORIGIN      
        1 medtnqfvkk lkndqkkqek nkkhgkghpe eklpnkqh
//
LOCUS       WP_235252704             317 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: lysylphosphatidylglycerol synthase domain-containing
            protein [Bacillaceae].
ACCESSION   WP_235252704
VERSION     WP_235252704.1
KEYWORDS    RefSeq.
SOURCE      Bacillaceae
  ORGANISM  Bacillaceae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales.
REFERENCE   1  (residues 1 to 317)
  AUTHORS   Staubitz,P., Neumann,H., Schneider,T., Wiedemann,I. and Peschel,A.
  TITLE     MprF-mediated biosynthesis of lysylphosphatidylglycerol, an
            important determinant in staphylococcal defensin resistance
  JOURNAL   FEMS Microbiol Lett 231 (1), 67-71 (2004)
   PUBMED   14769468
REFERENCE   2  (residues 1 to 317)
  AUTHORS   Kristian,S.A., Durr,M., Van Strijp,J.A., Neumeister,B. and
            Peschel,A.
  TITLE     MprF-mediated lysinylation of phospholipids in Staphylococcus
            aureus leads to protection against oxygen-independent neutrophil
            killing
  JOURNAL   Infect Immun 71 (1), 546-549 (2003)
   PUBMED   12496209
REFERENCE   3  (residues 1 to 317)
  AUTHORS   Peschel,A., Jack,R.W., Otto,M., Collins,L.V., Staubitz,P.,
            Nicholson,G., Kalbacher,H., Nieuwenhuizen,W.F., Jung,G.,
            Tarkowski,A., van Kessel,K.P. and van Strijp,J.A.
  TITLE     Staphylococcus aureus resistance to human defensins and evasion of
            neutrophil killing via the novel virulence factor MprF is based on
            modification of membrane lipids with l-lysine
  JOURNAL   J Exp Med 193 (9), 1067-1076 (2001)
   PUBMED   11342591
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015651.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03706.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Bacillaceae"
                     /db_xref="taxon:186817"
     Protein         1..317
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /calculated_mol_wt=36055
     Region          14..>314
                     /region_name="bifunc_MprF"
                     /note="bifunctional lysylphosphatidylglycerol
                     flippase/synthetase MprF; NF033480"
                     /db_xref="CDD:468043"
ORIGIN      
        1 msngmkkiwi nmakillpiv lfiivvreik nmivstdihl iygylqiipi qslfyivigg
       61 fmatlpmffy dfylakhlkk dipfvelgky sfisnsisnl vgfggligia lrnffykqye
      121 tdrkkllkgi avvtlfyltg isilawiail yskrlnlide hiwifasiiv vglifpvlvv
      181 syqkvklhnf vfereqilgl icvslmewif lfsylfliak lialpvsvgd ffllflvaac
      241 tgiismipgg mgsfeliflw gieslgvese qmlivlflyr vgyyllpflm avflllmeis
      301 kkikknatai lrgltse
//
LOCUS       WP_235252766             148 aa            linear   BCT 02-MAR-2025
DEFINITION  MarR family transcriptional regulator [Niallia circulans].
ACCESSION   WP_235252766
VERSION     WP_235252766.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 148)
  AUTHORS   Alekshun,M.N., Levy,S.B., Mealy,T.R., Seaton,B.A. and Head,J.F.
  TITLE     The crystal structure of MarR, a regulator of multiple antibiotic
            resistance, at 2.3 A resolution
  JOURNAL   Nat Struct Biol 8 (8), 710-714 (2001)
   PUBMED   11473263
REFERENCE   2  (residues 1 to 148)
  AUTHORS   Sulavik,M.C., Dazer,M. and Miller,P.F.
  TITLE     The Salmonella typhimurium mar locus: molecular and genetic
            analyses and assessment of its role in virulence
  JOURNAL   J Bacteriol 179 (6), 1857-1866 (1997)
   PUBMED   9068629
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013231.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01047.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..148
                     /product="MarR family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=17196
     Region          32..128
                     /region_name="HTH_ARSR"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; cl46857"
                     /db_xref="CDD:481197"
ORIGIN      
        1 mdkrqqlmse lmdlcneiiw lnkpelesal ngytlneiel ienialipna nvtklaaasy
       61 mtqgaisklt kkllakniie syqnaenkke iyfrltangq kinnihqelh glflkrdnev
      121 fknmtddefd tifrfigryr yhlknitr
//
LOCUS       WP_235252795              65 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Niallia circulans].
ACCESSION   WP_235252795
VERSION     WP_235252795.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024776.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13384.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..65
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=7682
     Region          <9..38
                     /region_name="HTH_Hin_like"
                     /note="Helix-turn-helix domain of Hin and related
                     proteins; cd00569"
                     /db_xref="CDD:259851"
     Region          <19..>60
                     /region_name="HTH_ARSR"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; cl46857"
                     /db_xref="CDD:481197"
ORIGIN      
        1 mdkwemymei kqllkqgfsq tkiaeklgvs rttvyrhlkr spsemaewvd slqykskrqi
       61 dptyv
//
LOCUS       WP_235252852             158 aa            linear   BCT 02-MAR-2025
DEFINITION  spore germination protein, partial [Niallia circulans].
ACCESSION   WP_235252852
VERSION     WP_235252852.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 158)
  AUTHORS   Paidhungat,M. and Setlow,P.
  TITLE     Role of ger proteins in nutrient and nonnutrient triggering of
            spore germination in Bacillus subtilis
  JOURNAL   J Bacteriol 182 (9), 2513-2519 (2000)
   PUBMED   10762253
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015292.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03323.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         <1..>158
                     /product="spore germination protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009847 - spore germination [Evidence
                     IEA]"
     Region          <1..>157
                     /region_name="GerA"
                     /note="Bacillus/Clostridium GerA spore germination
                     protein; cl10605"
                     /db_xref="CDD:471992"
ORIGIN      
        1 krikstsmvy etkkvgvrtk ttvailymrd ivdpkivqdv knklddlhid rafsatqlee
       61 lmeptkalfp lmgytgradf tvncmlngrv alivdgtpaa liapanlfll vkapedihft
      121 alaatfgqtl rllglsvsll lpaffvails yhqdqlpy
//
LOCUS       WP_235252863              74 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Niallia circulans].
ACCESSION   WP_235252863
VERSION     WP_235252863.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 74)
  AUTHORS   Ronning,D.R., Guynet,C., Ton-Hoang,B., Perez,Z.N., Ghirlando,R.,
            Chandler,M. and Dyda,F.
  TITLE     Active site sharing and subterminal hairpin recognition in a new
            class of DNA transposases
  JOURNAL   Mol Cell 20 (1), 143-154 (2005)
   PUBMED   16209952
REFERENCE   2  (residues 1 to 74)
  AUTHORS   Brynestad,S., Synstad,B. and Granum,P.E.
  TITLE     The Clostridium perfringens enterotoxin gene is on a transposable
            element in type A human food poisoning strains
  JOURNAL   Microbiology (Reading) 143 (Pt 7), 2109-2115 (1997)
   PUBMED   9245800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013921.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01797.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         <1..74
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <1..47
                     /region_name="Y1_Tnp"
                     /note="Transposase IS200 like; cl00848"
                     /db_xref="CDD:469954"
ORIGIN      
        1 kgksslmifd rhanlkyryg nrkfwcrgfy vdtvgrnkkq iqeyirnqlk edymadqltl
       61 feefdpftge knrk
//
LOCUS       WP_235252866              62 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Niallia circulans].
ACCESSION   WP_235252866
VERSION     WP_235252866.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 62)
  AUTHORS   Ronning,D.R., Guynet,C., Ton-Hoang,B., Perez,Z.N., Ghirlando,R.,
            Chandler,M. and Dyda,F.
  TITLE     Active site sharing and subterminal hairpin recognition in a new
            class of DNA transposases
  JOURNAL   Mol Cell 20 (1), 143-154 (2005)
   PUBMED   16209952
REFERENCE   2  (residues 1 to 62)
  AUTHORS   Brynestad,S., Synstad,B. and Granum,P.E.
  TITLE     The Clostridium perfringens enterotoxin gene is on a transposable
            element in type A human food poisoning strains
  JOURNAL   Microbiology (Reading) 143 (Pt 7), 2109-2115 (1997)
   PUBMED   9245800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013921.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01797.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..62
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         <1..62
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <1..46
                     /region_name="Y1_Tnp"
                     /note="Transposase IS200 like; cl00848"
                     /db_xref="CDD:469954"
ORIGIN      
        1 lkgksslmih drhanlkynh gnrtywakgy yvstvglnek tiakyiireq eaedrlrdnm
       61 sk
//
LOCUS       WP_235252782             257 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: CAP domain-containing protein [Bacillaceae].
ACCESSION   WP_235252782
VERSION     WP_235252782.1
KEYWORDS    RefSeq.
SOURCE      Bacillaceae
  ORGANISM  Bacillaceae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales.
REFERENCE   1  (residues 1 to 257)
  AUTHORS   Gibbs,G.M., Roelants,K. and O'Bryan,M.K.
  TITLE     The CAP superfamily: cysteine-rich secretory proteins, antigen 5,
            and pathogenesis-related 1 proteins--roles in reproduction, cancer,
            and immune defense
  JOURNAL   Endocr Rev 29 (7), 865-897 (2008)
   PUBMED   18824526
REFERENCE   2  (residues 1 to 257)
  AUTHORS   Milne,T.J., Abbenante,G., Tyndall,J.D., Halliday,J. and Lewis,R.J.
  TITLE     Isolation and characterization of a cone snail protease with
            homology to CRISP proteins of the pathogenesis-related protein
            superfamily
  JOURNAL   J Biol Chem 278 (33), 31105-31110 (2003)
   PUBMED   12759345
REFERENCE   3  (residues 1 to 257)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
REFERENCE   4  (residues 1 to 257)
  AUTHORS   Fernandez,C., Szyperski,T., Bruyere,T., Ramage,P., Mosinger,E. and
            Wuthrich,K.
  TITLE     NMR solution structure of the pathogenesis-related protein P14a
  JOURNAL   J Mol Biol 266 (3), 576-593 (1997)
   PUBMED   9067611
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012415.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00188.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Bacillaceae"
                     /db_xref="taxon:186817"
     Protein         1..257
                     /product="CAP domain-containing protein"
                     /calculated_mol_wt=28823
     Region          133..256
                     /region_name="CAP"
                     /note="CAP (cysteine-rich secretory proteins, antigen 5,
                     and pathogenesis-related 1 proteins) domain family;
                     cl00133"
                     /db_xref="CDD:412178"
ORIGIN      
        1 mkkknlifsv aaastlmatp laskaeaatv qpkeakviyq synlseeqln kivndfssny
       61 qidldkvwse wkesiakqqt yqsenkqtev kkdnteqidk knqeqskpet ttsqnnkvae
      121 ptnnkvedat asvsafekev veltnkeran ydlpaltlds elskvakaks qdmstnnyfd
      181 htsstygspf dmmeqfgity kaageniakg qktpeevvke wmnseghran ilsdkfthig
      241 vgyvengnyw tqqfigk
//
LOCUS       WP_235252869              42 aa            linear   BCT 02-MAR-2025
DEFINITION  spore germination protein, partial [Niallia circulans].
ACCESSION   WP_235252869
VERSION     WP_235252869.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 42)
  AUTHORS   Paidhungat,M. and Setlow,P.
  TITLE     Role of ger proteins in nutrient and nonnutrient triggering of
            spore germination in Bacillus subtilis
  JOURNAL   J Bacteriol 182 (9), 2513-2519 (2000)
   PUBMED   10762253
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015292.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03323.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..42
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..>42
                     /product="spore germination protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009847 - spore germination [Evidence
                     IEA]"
     Region          <6..>42
                     /region_name="GerA"
                     /note="Bacillus/Clostridium GerA spore germination
                     protein; cl10605"
                     /db_xref="CDD:471992"
ORIGIN      
        1 mmrmlsvrgp kdgfveevgv nvalirkrik stsmvyetkk vg
//
LOCUS       WP_235252938            1620 aa            linear   BCT 02-MAR-2025
DEFINITION  zincin-like metallopeptidase toxin domain-containing protein
            [Escherichia coli].
ACCESSION   WP_235252938
VERSION     WP_235252938.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 1620)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026976.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15640.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1620
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..1620
                     /product="zincin-like metallopeptidase toxin
                     domain-containing protein"
                     /calculated_mol_wt=180362
     Region          <252..305
                     /region_name="PAAR_RHS"
                     /note="proline-alanine-alanine-arginine (PAAR) domain,
                     also containing C-terminal Rearrangement hotspot (Rhs)
                     extensions; cd14742"
                     /db_xref="CDD:269827"
     Region          393..454
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
     Region          553..593
                     /region_name="YD_repeat_2x"
                     /note="YD repeat (two copies); TIGR01643"
                     /db_xref="CDD:273728"
     Region          <592..1470
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
     Region          1485..1613
                     /region_name="Tox-MPTase4"
                     /note="Metallopeptidase toxin 4; pfam15640"
                     /db_xref="CDD:406148"
ORIGIN      
        1 msegpggpqg ataggtlamr mlsqqamvas qmkraandka iaqmlaskks gppaarlgde
       61 iqhksflgal agavlgaivt iaegclimaa catgpyalvl vpalmyasyk asdyveekqn
      121 qleswinsfc dtdgaintgs envkingkpa araavtlppp pppgaipevp qgepswgdia
      181 tdllesaaek avplakawgn avitltdsna gfmdrvsaga sllfpagpvl mefatmvggr
      241 geikkdvdfp eagedtalcd kenkppriaq gssnvfinnq paarqgdkle csaaivggsp
      301 dvfiggeqvt yldiqpefpp wqrmilggit iasyllppag llgklknlar lgklgnllgk
      361 sgkllgaklg allgktgksl ksiankvirw vtdpvdpvtg aycdertdft lgqtlplsft
      421 rfhssvlplh gltgvgwsds wseyawvreq gnrvdiislg atlnfafdge sdtavnpyha
      481 qyilrrrddy lelfdrdals srffydafpg mrlrhpvtdd tsddrlahsp adrmymlggm
      541 sdtasnritf erdsqyritg vshtdgirlk ltyhasgylk aihrtdngiq tlatyeqdar
      601 grlteadarl dyhlfyeyda adriirwsdn dqtwsrftyd aqgrcvnvtg aegyynatld
      661 ygdgcttvtd gkgihryyyd pdgnilreea pdgstttyew defhhllarh spagrvekfe
      721 ynaahgqlsr ytaadgaewl yryderglfs nitdpagqtw tqlcderglp vslvspqgee
      781 trlaytaqgl lsgifrqder rlgieydhhn rpetltdvmg rehhteysgh dlpvkmrgpg
      841 gqsvrlqwqq hhklsgiera gtgaegfryd rhgnllaytd gngvvwtmey gpfdlpvart
      901 dgeghrwqyr ydkdtlqlte vinpqgesyr yildncgrvt eerdwggvvw ryrydadglc
      961 tarvngleet ilysrdaagr laeiitpegk tqyaydksgr ltgifspdgi sqrtgyderg
     1021 rvnvttqgrr tieyhypdeh tvircilppe derdrhpdes llkttyryna ageltevilp
     1081 gdetltfsrd eagrevlrhs nrgfaceqgw naagqpvsqr agffpaeatw gglvpslvre
     1141 yrydsagnvs gvtsredygr etrreyrldr ngqvtavtas gtglgygegd esygydscgy
     1201 lkaqsagrhr iseeteryag ghrlkqagnt qydydaagrm vsrtryrdgy rpeterfrwd
     1261 srdqltgycs aqgeqweyrh dasgrrtekr cdrkkirfty lwdgdsiaei reyrddklys
     1321 vrhlvfngfe lisqqfsrer qahpsvapqw vtrtnhavsd ltgrplmlfn segktvwrpg
     1381 qtslwglals lpadtgypdp rgeldpeadp gllyagqwqd aesglcynrf ryyepetgmy
     1441 lvsdplgllg geqtyryvpn pcgwvdplgl aasskisslm dyigdgrrvs ghtgfldgvr
     1501 lsrsqinnia kemeklgikv irkadkylpp naraafdygl rniylrknat lyevyhevih
     1561 akqfakigre ayealgrlsr eehvlneilk sknlfneaei ahaikyvegl rekfmmgltn
//
LOCUS       WP_235252965             431 aa            linear   BCT 02-MAR-2025
DEFINITION  type 4b pilus protein PilO2 [Escherichia coli].
ACCESSION   WP_235252965
VERSION     WP_235252965.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 431)
  AUTHORS   Sakai,D. and Komano,T.
  TITLE     Genes required for plasmid R64 thin-pilus biogenesis:
            identification and localization of products of the pilK, pilM,
            pilO, pilP, pilR, and pilT genes
  JOURNAL   J Bacteriol 184 (2), 444-451 (2002)
   PUBMED   11751821
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018562.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06864.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     gene            1..431
                     /gene="pilO2"
     Protein         1..431
                     /product="type 4b pilus protein PilO2"
                     /calculated_mol_wt=47927
     Region          22..428
                     /region_name="PAP_PilO"
                     /note="Pilin accessory protein (PilO); pfam06864"
                     /db_xref="CDD:429161"
ORIGIN      
        1 madedinpvv lledpkvnhr vwaaclkwtp vvkkqrvpsh hkhkshvkpr rltslkvtvg
       61 srnsrgkisr ltgtgiltrp ernhyfslal afcswvrngy gvfrysdkel lflasingqp
      121 avmadlsgnd advaqkvslf lamneeppek wqvvsslehp dnwesiitrl ssadlrrckl
      181 tvgnrskftl pavlflvaag agtvfwmtqp epdvvptpee iaararlqfk kpdpppelph
      241 pwasqpvisd flkacadlrk pspvalegwk ltggtctpet ftliyerqpg gtiegflars
      301 keifgvipdf nlkdgarqvs vtrplpslpg rdeavpvpse qlmrvftwfq kkqltpaine
      361 iaipeplpgn dgepapvqkw keyqfslstp vnpdeffpll qdtgvrlsni hfelnggtfs
      421 ysseghiyas k
//
LOCUS       WP_235252981             319 aa            linear   BCT 02-MAR-2025
DEFINITION  MucB/RseB C-terminal domain-containing protein [Halomonas sp.
            Cn5-12].
ACCESSION   WP_235252981
VERSION     WP_235252981.1
KEYWORDS    RefSeq.
SOURCE      Halomonas sp. Cn5-12
  ORGANISM  Halomonas sp. Cn5-12
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Halomonas.
REFERENCE   1  (residues 1 to 319)
  AUTHORS   Kim,D.Y., Jin,K.S., Kwon,E., Ree,M. and Kim,K.K.
  TITLE     Crystal structure of RseB and a model of its binding mode to RseA
  JOURNAL   Proc Natl Acad Sci U S A 104 (21), 8779-8784 (2007)
   PUBMED   17496148
REFERENCE   2  (residues 1 to 319)
  AUTHORS   Martinez-Salazar,J.M., Moreno,S., Najera,R., Boucher,J.C.,
            Espin,G., Soberon-Chavez,G. and Deretic,V.
  TITLE     Characterization of the genes coding for the putative sigma factor
            AlgU and its regulators MucA, MucB, MucC, and MucD in Azotobacter
            vinelandii and evaluation of their roles in alginate biosynthesis
  JOURNAL   J Bacteriol 178 (7), 1800-1808 (1996)
   PUBMED   8606151
REFERENCE   3  (residues 1 to 319)
  AUTHORS   Martin,D.W., Schurr,M.J., Mudd,M.H. and Deretic,V.
  TITLE     Differentiation of Pseudomonas aeruginosa into the
            alginate-producing form: inactivation of mucB causes conversion to
            mucoidy
  JOURNAL   Mol Microbiol 9 (3), 497-506 (1993)
   PUBMED   8412698
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17188.9
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Halomonas sp. Cn5-12"
                     /db_xref="taxon:2908885"
     Protein         1..319
                     /product="MucB/RseB C-terminal domain-containing protein"
                     /calculated_mol_wt=34854
     Region          36..319
                     /region_name="RseB"
                     /note="negative regulator of sigma E activity [Signal
                     transduction mechanisms]; COG3026"
                     /db_xref="CDD:442262"
ORIGIN      
        1 mvtarcalwg grlaltlsll saslhssfvt adtptalsca evaeqqtpat tqawlelalv
       61 aghcydfqar avaidalgvr tlalshlird gvrqqavqhl dgpsvsierr siagymarft
      121 pevnsglkap eawaqhvasy ydislqedar vagrdavqlh fsprdqqryy hawwvdketg
      181 lllkhvisdr qervletfqi tqlhspklyd ggvaddvgae qvdhswhaew lpegfvaqpq
      241 dpgqpvsnqr vysdglaavs lfvnpieqsv lkegvhqlgv staavalvsg gdqrwqliai
      301 gelpsdmlqr ivqsvriep
//
LOCUS       WP_235252992             563 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing phosphohydrolase [Halomonas sp. Cn5-12].
ACCESSION   WP_235252992
VERSION     WP_235252992.1
KEYWORDS    RefSeq.
SOURCE      Halomonas sp. Cn5-12
  ORGANISM  Halomonas sp. Cn5-12
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Halomonas.
REFERENCE   1  (residues 1 to 563)
  AUTHORS   Galperin,M.Y. and Chou,S.H.
  TITLE     Sequence Conservation, Domain Architectures, and Phylogenetic
            Distribution of the HD-GYP Type c-di-GMP Phosphodiesterases
  JOURNAL   J Bacteriol 204 (4), e0056121 (2022)
   PUBMED   34928179
REFERENCE   2  (residues 1 to 563)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024878.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13487.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Halomonas sp. Cn5-12"
                     /db_xref="taxon:2908885"
     Protein         1..563
                     /product="HD domain-containing phosphohydrolase"
                     /calculated_mol_wt=62782
     Region          51..235
                     /region_name="YcgR"
                     /note="Cyclic di-GMP-binding flagellar brake protein
                     FlgZ/YcgR, contains PilZNR(YcgR) and PilZ domains [Cell
                     motility]; COG5581"
                     /db_xref="CDD:444320"
     Region          <261..500
                     /region_name="HDGYP"
                     /note="HD-GYP domain, c-di-GMP phosphodiesterase class II
                     (or its inactivated variant) [Signal transduction
                     mechanisms]; COG2206"
                     /db_xref="CDD:441808"
ORIGIN      
        1 mavqqdeyes vtspsvissl lntmienggv tlclatpdar pepvvlmeqh agetlvmdls
       61 svdyllsrlq qgeqfflrgq sqgkvvrtpl lsltetrrsg grflccsnyp ssvevlqrre
      121 syraelrmgm vvsalvvges gesaqgelrd lsqdgcqlel pltasgilae tqyslklaft
      181 fpngtyfevn gvarhqktdp erhmlrvgfr fagctseqer qiwyfvceie reaarykkev
      241 qeerqpsplf eqpgkripdt erigrrdirr yatpmarrlv kvaayldaql lmlqqgsdid
      301 srqlsrnadr llmlheedre gllfatrcls lepllvrhgi avavhlldlv ganmprdvrk
      361 aivasglvhd lgkalipqvv fkapnfeath rqalsehvsl lmarlhtcqw lsatvaqavi
      421 gginerldgs gypagitgdd inelakasav vdvveamrrd rpdrpartaq qiyrhllahp
      481 hqfdrrwmrr yvehfkvlpv gslalfssdq lawilrldds gapaevvlaq aaeppmrdnl
      541 gsvlrgdvfe rlgkpvreva vst
//
LOCUS       WP_235253020             106 aa            linear   BCT 02-MAR-2025
DEFINITION  phage antirepressor KilAC domain-containing protein [Halomonas sp.
            Cn5-12].
ACCESSION   WP_235253020
VERSION     WP_235253020.1
KEYWORDS    RefSeq.
SOURCE      Halomonas sp. Cn5-12
  ORGANISM  Halomonas sp. Cn5-12
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Halomonas.
REFERENCE   1  (residues 1 to 106)
  AUTHORS   Iyer,L.M., Koonin,E.V. and Aravind,L.
  TITLE     Extensive domain shuffling in transcription regulators of DNA
            viruses and implications for the origin of fungal APSES
            transcription factors
  JOURNAL   Genome Biol 3 (3), RESEARCH0012 (2002)
   PUBMED   11897024
REFERENCE   2  (residues 1 to 106)
  AUTHORS   Heinrich,J., Velleman,M. and Schuster,H.
  TITLE     The tripartite immunity system of phages P1 and P7
  JOURNAL   FEMS Microbiol Rev 17 (1-2), 121-126 (1995)
   PUBMED   7669337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015340.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03374.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Halomonas sp. Cn5-12"
                     /db_xref="taxon:2908885"
     Protein         1..106
                     /product="phage antirepressor KilAC domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=11649
     Region          17..94
                     /region_name="ANT"
                     /note="Phage antirepressor protein KilAC domain;
                     pfam03374"
                     /db_xref="CDD:460903"
ORIGIN      
        1 mnapqrpqpp rvlgqrytlq eaaallgtgr ntlckrlrei gmldannvat rphtstgrlv
       61 velkvyenpg lgterpygkt lvtergllyi anrlniriqr daandg
//
LOCUS       WP_235253023             344 aa            linear   BCT 02-MAR-2025
DEFINITION  PriCT-2 domain-containing protein [Halomonas sp. Cn5-12].
ACCESSION   WP_235253023
VERSION     WP_235253023.1
KEYWORDS    RefSeq.
SOURCE      Halomonas sp. Cn5-12
  ORGANISM  Halomonas sp. Cn5-12
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Halomonas.
REFERENCE   1  (residues 1 to 344)
  AUTHORS   Iyer,L.M., Koonin,E.V., Leipe,D.D. and Aravind,L.
  TITLE     Origin and evolution of the archaeo-eukaryotic primase superfamily
            and related palm-domain proteins: structural insights and new
            members
  JOURNAL   Nucleic Acids Res 33 (12), 3875-3896 (2005)
   PUBMED   16027112
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020290.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08707.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Halomonas sp. Cn5-12"
                     /db_xref="taxon:2908885"
     Protein         1..344
                     /product="PriCT-2 domain-containing protein"
                     /GO_function="GO:0016817 - hydrolase activity, acting on
                     acid anhydrides [Evidence IEA]"
                     /calculated_mol_wt=38452
     Region          12..81
                     /region_name="PriCT_2"
                     /note="Primase C terminal 2 (PriCT-2); pfam08707"
                     /db_xref="CDD:430165"
     Region          85..>338
                     /region_name="COG4643"
                     /note="Uncharacterized domain associated with
                     phage/plasmid primase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:443681"
ORIGIN      
        1 mqhdlltlde lrlalthipa ddretwvnig navkteygdd gffawdewsq ggasynakda
       61 qsvwrslqvg snrmgtiihh aqqygwkrer qelsaddrkr mkaeqdarrk vrqaeieade
      121 qrreamrttv amacrhfikk hcvrdgqsay ldakqvgafg vwfprcsvvi siddqaqrad
      181 vwpgmevkrf feelpqprpd hisfmriqqg dvvvplrdvn gtvvsiqvir pngtklfpky
      241 grkagtwhri gdaseaptva vaegyataat ihmatgwpva vamdagnlqr vvpllgqlyq
      301 qarlvicgdd dpqvkdnpgr kkaeeiaqam havavfpqln geaa
//
LOCUS       WP_235253124             264 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2303 family protein [Halomonas sp. Cn5-12].
ACCESSION   WP_235253124
VERSION     WP_235253124.1
KEYWORDS    RefSeq.
SOURCE      Halomonas sp. Cn5-12
  ORGANISM  Halomonas sp. Cn5-12
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Halomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021574.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10065.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Halomonas sp. Cn5-12"
                     /db_xref="taxon:2908885"
     Protein         1..264
                     /product="DUF2303 family protein"
                     /calculated_mol_wt=28975
     Region          1..264
                     /region_name="DUF2303"
                     /note="Uncharacterized conserved protein (DUF2303);
                     cl02338"
                     /db_xref="CDD:470541"
ORIGIN      
        1 msltkdalqh leanhktgte aaeghalivg egfklvdmek yqghrrrfrg qfktkglrdf
       61 isyvsarqad apvfidrdam aacsyldigd kslpghcdhs atlnlpktpe fsaylnadgs
      121 tfgqedmvel vedwghlltf enskgepler gkvihafrkv slddltsies dkqehssrvg
      181 vmnsvtvkna drlptviywk vtpyeglser tlamrvsskt kggpsfglra ialdaakeei
      241 aaefaklvtd glpesecllg tfqp
//
LOCUS       WP_235253372             407 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC-three component system protein [Halomonas sp. Cn5-12].
ACCESSION   WP_235253372
VERSION     WP_235253372.1
KEYWORDS    RefSeq.
SOURCE      Halomonas sp. Cn5-12
  ORGANISM  Halomonas sp. Cn5-12
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Halomonas.
REFERENCE   1  (residues 1 to 407)
  AUTHORS   Krishnan,A., Burroughs,A.M., Iyer,L.M. and Aravind,L.
  TITLE     Comprehensive classification of ABC ATPases and their functional
            radiation in nucleoprotein dynamics and biological conflict systems
  JOURNAL   Nucleic Acids Res 48 (18), 10045-10075 (2020)
   PUBMED   32894288
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042658.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20283.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Halomonas sp. Cn5-12"
                     /db_xref="taxon:2908885"
     Protein         1..407
                     /product="ABC-three component system protein"
                     /calculated_mol_wt=46349
     Region          267..399
                     /region_name="CTD7"
                     /note="C-terminal domain 7 of the ABC-three component
                     (ABC-3C) systems; pfam20283"
                     /db_xref="CDD:466433"
ORIGIN      
        1 mtitktdkys aseqglgyiy qarlallrll qlpedtavfl ekdddldfid cdggkslasl
       61 khkavgdrla dlstdfwksv niwlerykrd gssasnlqff lfttgtvsag sflerllpdq
      121 pvrssdlvtl telanaslan srsqliapia vsfnelsepe kqdflerili ldgspriddi
      181 psiirdkhmr sirrehrefv ferlegwwtd avikqlthar pegifgyevs dklsnfaeey
      241 kadnlpitfr gkqhageidi eedprlfvaq lreiglsssr irsavldyyr afeqrsawar
      301 enllvsgeve eyedrladew nrykdvvfek laddsaenal reagatlynw aefetgkles
      361 lrirarvtep yvlrgsfhil adatpkprvy whpgfldrls kvlgvas
//
LOCUS       WP_235253502             345 aa            linear   BCT 02-MAR-2025
DEFINITION  CNNM domain-containing protein [Halomonas sp. Cn5-12].
ACCESSION   WP_235253502
VERSION     WP_235253502.1
KEYWORDS    RefSeq.
SOURCE      Halomonas sp. Cn5-12
  ORGANISM  Halomonas sp. Cn5-12
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Halomonas.
REFERENCE   1  (residues 1 to 345)
  AUTHORS   Chen,Y.S., Kozlov,G., Moeller,B.E., Rohaim,A., Fakih,R., Roux,B.,
            Burke,J.E. and Gehring,K.
  TITLE     Crystal structure of an archaeal CorB magnesium transporter
  JOURNAL   Nat Commun 12 (1), 4028 (2021)
   PUBMED   34188059
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 345)
  AUTHORS   Gimenez-Mascarell,P., Oyenarte,I., Hardy,S., Breiderhoff,T.,
            Stuiver,M., Kostantin,E., Diercks,T., Pey,A.L., Ereno-Orbea,J.,
            Martinez-Chantar,M.L., Khalaf-Nazzal,R., Claverie-Martin,F.,
            Muller,D., Tremblay,M.L. and Martinez-Cruz,L.A.
  TITLE     Structural Basis of the Oncogenic Interaction of Phosphatase PRL-1
            with the Magnesium Transporter CNNM2
  JOURNAL   J Biol Chem 292 (3), 786-801 (2017)
   PUBMED   27899452
REFERENCE   3  (residues 1 to 345)
  AUTHORS   Gulerez,I., Funato,Y., Wu,H., Yang,M., Kozlov,G., Miki,H. and
            Gehring,K.
  TITLE     Phosphocysteine in the PRL-CNNM pathway mediates magnesium
            homeostasis
  JOURNAL   EMBO Rep 17 (12), 1890-1900 (2016)
   PUBMED   27856537
REFERENCE   4  (residues 1 to 345)
  AUTHORS   de Baaij,J.H., Stuiver,M., Meij,I.C., Lainez,S., Kopplin,K.,
            Venselaar,H., Muller,D., Bindels,R.J. and Hoenderop,J.G.
  TITLE     Membrane topology and intracellular processing of cyclin M2 (CNNM2)
  JOURNAL   J Biol Chem 287 (17), 13644-13655 (2012)
   PUBMED   22399287
REFERENCE   5  (residues 1 to 345)
  AUTHORS   Yang,M., Jensen,L.T., Gardner,A.J. and Culotta,V.C.
  TITLE     Manganese toxicity and Saccharomyces cerevisiae Mam3p, a member of
            the ACDP (ancient conserved domain protein) family
  JOURNAL   Biochem J 386 (Pt 3), 479-487 (2005)
   PUBMED   15498024
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013741.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01595.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Halomonas sp. Cn5-12"
                     /db_xref="taxon:2908885"
     Protein         1..345
                     /product="CNNM domain-containing protein"
                     /calculated_mol_wt=38394
     Region          1..>317
                     /region_name="TlyC"
                     /note="Hemolysin-related protein, contains CBS domains,
                     UPF0053 family [General function prediction only];
                     COG1253"
                     /db_xref="CDD:440865"
ORIGIN      
        1 mfllvtiatf siafsflcsi leaallsitp syiakqkedn pklhtaltkl ktnidrplaa
       61 iltlntiaht vgatavgaqa avvfgeasia ivsavmtmli lilseiipkt igatywrgla
      121 pllpkllnpm imgllpfiwm seqitrrlgk sehdvdlrde ikvlarvgle qqvldadesr
      181 tiinmlnlhe iavskamtpr tvcetvppnm svsefdeqyg kapftrfpvm dngeqafgyv
      241 hkadmyhadd tktmrelmhp igsvevsnnv eqvftsmlkd hlhmrvvyde hgtfvglitl
      301 ediietilgq divdetdsva nlrhyakqrw vkrikredkn vkpae
//
LOCUS       WP_235253584             323 aa            linear   BCT 02-MAR-2025
DEFINITION  LysM peptidoglycan-binding domain-containing protein [Halomonas sp.
            Cn5-12].
ACCESSION   WP_235253584
VERSION     WP_235253584.1
KEYWORDS    RefSeq.
SOURCE      Halomonas sp. Cn5-12
  ORGANISM  Halomonas sp. Cn5-12
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Halomonas.
REFERENCE   1  (residues 1 to 323)
  AUTHORS   Bateman,A. and Bycroft,M.
  TITLE     The structure of a LysM domain from E. coli membrane-bound lytic
            murein transglycosylase D (MltD)
  JOURNAL   J Mol Biol 299 (4), 1113-1119 (2000)
   PUBMED   10843862
REFERENCE   2  (residues 1 to 323)
  AUTHORS   Joris,B., Englebert,S., Chu,C.P., Kariyama,R., Daneo-Moore,L.,
            Shockman,G.D. and Ghuysen,J.M.
  TITLE     Modular design of the Enterococcus hirae muramidase-2 and
            Streptococcus faecalis autolysin
  JOURNAL   FEMS Microbiol Lett 70 (3), 257-264 (1992)
   PUBMED   1352512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01476.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Halomonas sp. Cn5-12"
                     /db_xref="taxon:2908885"
     Protein         1..323
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=34557
     Region          <38..149
                     /region_name="mltD"
                     /note="membrane-bound lytic murein transglycosylase D;
                     Provisional; PRK10783"
                     /db_xref="CDD:182727"
     Region          <104..162
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
     Region          <187..323
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
ORIGIN      
        1 mdqltlagkr ylarspqrpr lshwlticvl asvltgcass tpsssqrvpa assasaiggn
       61 wvevrrgdtl gqlaaranvp lerlerfnpg vdsrrlavgq rlliptqqer apsggpyryq
      121 irpgdtfsgi arhfntttgr iqsanqgtsp talrvgqiis vplsstarta ssssssaass
      181 asnrnaptpa ptpsaslpas arrwpwpled yrvvrqfgad srgtlqpmll atqagaraka
      241 vapgevrfad smrqlgdvvi vhhadnlqtv yalcerilvr vgdqvstgde lcdvgqsnat
      301 qrydllfdlr qggkpidprq vlr
//
LOCUS       WP_235253721             229 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Halomonas sp. Cn5-12].
ACCESSION   WP_235253721
VERSION     WP_235253721.1
KEYWORDS    RefSeq.
SOURCE      Halomonas sp. Cn5-12
  ORGANISM  Halomonas sp. Cn5-12
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Halomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13701.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Halomonas sp. Cn5-12"
                     /db_xref="taxon:2908885"
     Protein         <1..229
                     /product="transposase"
     Region          <2..211
                     /region_name="transpos_IS1380"
                     /note="IS1380 family transposase; NF033539"
                     /db_xref="CDD:468070"
ORIGIN      
        1 gaqvrvrida gftdndtlea ledrgieylg rlrshtglqk laapllkrpp grppeqprew
       61 chdlayqags wpaprrvvlv vqerpddlll hafflvtnlg kfdwppekil alyrkrgsae
      121 ahmgevksal dvhlsstdrg astvqdvmar nevslllsly ayqvlhglrc llerqtrqgw
      181 slsrmreqvl kvaatlrlha rritvhlgaa adkwwptllk glpkltals
//
LOCUS       WP_235253774             234 aa            linear   BCT 02-MAR-2025
DEFINITION  YagK/YfjJ domain-containing protein [Halomonas sp. Cn5-12].
ACCESSION   WP_235253774
VERSION     WP_235253774.1
KEYWORDS    RefSeq.
SOURCE      Halomonas sp. Cn5-12
  ORGANISM  Halomonas sp. Cn5-12
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Halomonas.
REFERENCE   1  (residues 1 to 234)
  AUTHORS   Lin,N.T., Chang,R.Y., Lee,S.J. and Tseng,Y.H.
  TITLE     Plasmids carrying cloned fragments of RF DNA from the filamentous
            phage (phi)Lf can be integrated into the host chromosome via
            site-specific integration and homologous recombination
  JOURNAL   Mol Genet Genomics 266 (3), 425-435 (2001)
   PUBMED   11713672
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023154.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11726.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Halomonas sp. Cn5-12"
                     /db_xref="taxon:2908885"
     Protein         1..234
                     /product="YagK/YfjJ domain-containing protein"
                     /calculated_mol_wt=27140
     Region          49..232
                     /region_name="Inovirus_Gp2"
                     /note="Inovirus Gp2; pfam11726"
                     /db_xref="CDD:432027"
ORIGIN      
        1 mnttihnvgq hrrkrhpdnp alklwwenyy hgmwvqtqkg plienylakl ldvmrnarqd
       61 cnrilairid lrfpismnss avgqknstls efqiflrrel drantkyphr lrvvwcceqn
      121 tsinphyhll lllngdayns igfvgkspcg ryvyenifhr ivrswalain qphecmeglv
      181 qlprkpitne mavwffqred qmtfgqvfga asylckaysk nlgngvhcfd gsrg
//
LOCUS       WP_235252507             206 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine phosphate synthase [Niallia circulans].
ACCESSION   WP_235252507
VERSION     WP_235252507.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 206)
  AUTHORS   Hazra,A.B., Han,Y., Chatterjee,A., Zhang,Y., Lai,R.Y., Ealick,S.E.
            and Begley,T.P.
  TITLE     A missing enzyme in thiamin thiazole biosynthesis: identification
            of TenI as a thiazole tautomerase
  JOURNAL   J Am Chem Soc 133 (24), 9311-9319 (2011)
   PUBMED   21534620
REFERENCE   2  (residues 1 to 206)
  AUTHORS   Zhang,Y., Taylor,S.V., Chiu,H.J. and Begley,T.P.
  TITLE     Characterization of the Bacillus subtilis thiC operon involved in
            thiamine biosynthesis
  JOURNAL   J Bacteriol 179 (9), 3030-3035 (1997)
   PUBMED   9139923
REFERENCE   3  (residues 1 to 206)
  AUTHORS   Pang,A.S., Nathoo,S. and Wong,S.L.
  TITLE     Cloning and characterization of a pair of novel genes that regulate
            production of extracellular enzymes in Bacillus subtilis
  JOURNAL   J Bacteriol 173 (1), 46-54 (1991)
   PUBMED   1898926
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014622.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02581.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..206
                     /product="thiamine phosphate synthase"
                     /calculated_mol_wt=22991
     Region          7..196
                     /region_name="TIM-like beta/alpha barrel domains"
                     /note="A large family of domains similar to triose
                     phosphate isomerase (TIM) which, in general, share an
                     eight beta/alpha closed barrel structure; cl21457"
                     /db_xref="CDD:473867"
     Site            order(8,33,35,79,102,119,121,128,130,154,158,176..179)
                     /site_type="other"
                     /note="thiamine phosphate binding site [chemical binding]"
                     /db_xref="CDD:238317"
     Site            order(33,35,37,64..65,84,102,128,130..131,158,178..179)
                     /site_type="active"
                     /db_xref="CDD:238317"
     Site            order(35,37,64..65,81,84,102,131)
                     /site_type="other"
                     /note="pyrophosphate binding site [ion binding]"
                     /db_xref="CDD:238317"
ORIGIN      
        1 mnikimavtd nkhtlkklls illeihpyvd ylqirekdks pkeiyrlcdy llkegvpark
       61 iivndridia llhslknvhl ptsgvsvndv ktrfpkmyig vsvhskeeai ladkeiadyv
      121 iyghcyptns kkgkppivls siseikrnis iplyaiggit enqieelasf gvdgvaimsa
      181 ifsssdplkv vksmrercee lgneev
//
LOCUS       WP_235253781             207 aa            linear   BCT 02-MAR-2025
DEFINITION  IS66 family transposase, partial [Halomonas sp. Cn5-12].
ACCESSION   WP_235253781
VERSION     WP_235253781.1
KEYWORDS    RefSeq.
SOURCE      Halomonas sp. Cn5-12
  ORGANISM  Halomonas sp. Cn5-12
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Halomonas.
REFERENCE   1  (residues 1 to 207)
  AUTHORS   Schwedock,J. and Long,S.R.
  TITLE     An open reading frame downstream of Rhizobium meliloti nodQ1 shows
            nucleotide sequence similarity to an Agrobacterium tumefaciens
            insertion sequence
  JOURNAL   Mol Plant Microbe Interact 7 (1), 151-153 (1994)
   PUBMED   8167368
REFERENCE   2  (residues 1 to 207)
  AUTHORS   Machida,Y., Sakurai,M., Kiyokawa,S., Ubasawa,A., Suzuki,Y. and
            Ikeda,J.E.
  TITLE     Nucleotide sequence of the insertion sequence found in the T-DNA
            region of mutant Ti plasmid pTiA66 and distribution of its
            homologues in octopine Ti plasmid
  JOURNAL   Proc Natl Acad Sci U S A 81 (23), 7495-7499 (1984)
   PUBMED   6095299
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015038.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03050.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Halomonas sp. Cn5-12"
                     /db_xref="taxon:2908885"
     Protein         <1..207
                     /product="IS66 family transposase"
     Region          <1..159
                     /region_name="transpos_IS66"
                     /note="IS66 family transposase; NF033517"
                     /db_xref="CDD:468053"
ORIGIN      
        1 rcfveaqkdh pekatealqq iaklyqiedt ikekeltgek krqyrldhak pvvsgffqwc
       61 rdqlgqggll psepltkaln yvlgretslt vfledpdvqp dtnhleralr pipmgkknwm
      121 fcwtelgaeh lgiiqslist cklhditpyt ylvdvlqris qhpasdvsdl tprlwktrfa
      181 enplralidp rhpdrqskqp eatvhah
//
LOCUS       WP_235253779             468 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease subunit S [Halomonas sp. Cn5-12].
ACCESSION   WP_235253779
VERSION     WP_235253779.1
KEYWORDS    RefSeq.
SOURCE      Halomonas sp. Cn5-12
  ORGANISM  Halomonas sp. Cn5-12
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Halomonas.
REFERENCE   1  (residues 1 to 468)
  AUTHORS   Janscak,P. and Bickle,T.A.
  TITLE     The DNA recognition subunit of the type IB restriction-modification
            enzyme EcoAI tolerates circular permutions of its polypeptide chain
  JOURNAL   J Mol Biol 284 (4), 937-948 (1998)
   PUBMED   9837717
REFERENCE   2  (residues 1 to 468)
  AUTHORS   Bickle,T.A. and Kruger,D.H.
  TITLE     Biology of DNA restriction
  JOURNAL   Microbiol Rev 57 (2), 434-450 (1993)
   PUBMED   8336674
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01420.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Halomonas sp. Cn5-12"
                     /db_xref="taxon:2908885"
     Protein         1..468
                     /product="restriction endonuclease subunit S"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=52118
     Region          <69..210
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
     Site            order(130,133..134,136..137,165,167,173,177,180..181,206,
                     208..209)
                     /site_type="other"
                     /note="TRD-CR/TRD-CR interface [polypeptide binding]"
                     /db_xref="CDD:341131"
     Region          239..424
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
ORIGIN      
        1 msypaypeyk dsgvewlgev pmhweiqplk yvatyndevl pestpdnhpi kyveisdvde
       61 qigvtgwseh ffssapsrar rvlkggdvli stvrtylrai apvieppinl vgstgfavir
      121 pipgiydsil lgyvvraewf issiiarsvg vsypainasd lvalslpipp wkeqkaiaff
      181 lnhetarida lveeqkrlia llkekrqavi shavtkgldp avpmkdsgve wlgevpahwv
      241 rkrlknvspf itvgivvnps sylaeeglpf iyggevregy ievdkarkis lensrrnrkt
      301 mletgdvvtm rvgypgvtav vppeceggnc asvmltkkgs ydsrwlcaam nsrlirhqve
      361 ivqygaaqkq fniadavefw lfeppideqa kiadyidres srfdqlvgea krnmqllqer
      421 rsalisaavt gkidvrgwqp pedsvvstea kqmevvckrs fhdvlppc
//
LOCUS       WP_235253314             184 aa            linear   BCT 02-MAR-2025
DEFINITION  3TM-type holin [Halomonas sp. Cn5-12].
ACCESSION   WP_235253314
VERSION     WP_235253314.1
KEYWORDS    RefSeq.
SOURCE      Halomonas sp. Cn5-12
  ORGANISM  Halomonas sp. Cn5-12
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Halomonas.
REFERENCE   1  (residues 1 to 184)
  AUTHORS   Westbye,A.B., Leung,M.M., Florizone,S.M., Taylor,T.A.,
            Johnson,J.A., Fogg,P.C. and Beatty,J.T.
  TITLE     Phosphate concentration and the putative sensor kinase protein CckA
            modulate cell lysis and release of the Rhodobacter capsulatus gene
            transfer agent
  JOURNAL   J Bacteriol 195 (22), 5025-5040 (2013)
   PUBMED   23995641
REFERENCE   2  (residues 1 to 184)
  AUTHORS   Hynes,A.P., Mercer,R.G., Watton,D.E., Buckley,C.B. and Lang,A.S.
  TITLE     DNA packaging bias and differential expression of gene transfer
            agent genes within a population during production and release of
            the Rhodobacter capsulatus gene transfer agent, RcGTA
  JOURNAL   Mol Microbiol 85 (2), 314-325 (2012)
   PUBMED   22640804
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11351.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Halomonas sp. Cn5-12"
                     /db_xref="taxon:2908885"
     Protein         1..184
                     /product="3TM-type holin"
                     /calculated_mol_wt=19630
     Region          30..>114
                     /region_name="GTA_holin_3TM"
                     /note="Holin of 3TMs, for gene-transfer release;
                     pfam11351"
                     /db_xref="CDD:402795"
ORIGIN      
        1 mewrdiaqtv gkiapiagga lagkagsavg siiagvlgve erpeaveaai qadpqaverl
       61 rrleqehere mlklsleset arlseinqtm raevgsestf ragwrpfngw mlalslasvn
      121 fgligvivmd paqlsvvvdv liwsvaaqaa vqgvnikqrs ndkarqlgqt psgfmdaisa
      181 irkr
//
LOCUS       WP_235256353             168 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail fiber C-terminal domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_235256353
VERSION     WP_235256353.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018524.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06820.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..168
                     /product="phage tail fiber C-terminal domain-containing
                     protein"
     Region          <1..>91
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          94..157
                     /region_name="Phage_fiber_C"
                     /note="Putative prophage tail fibre C-terminus; pfam06820"
                     /db_xref="CDD:148432"
ORIGIN      
        1 dkgergdtgp vgatgergpa gdagpagpqg pkgdrgerge tgltgnagpq gpkgdtgaag
       61 pagpqgpkge tgvagpvgat gpqgpkgdpg etqirfrlgp gniietnsng wfpdtdgali
      121 tgltfldpkd atrvqgffqh lqvrfgdgpw qdvkgldevg sdtgrtge
//
LOCUS       WP_235256395             591 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase [Escherichia coli].
ACCESSION   WP_235256395
VERSION     WP_235256395.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 591)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..591
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=66871
     Region          43..192
                     /region_name="PapC_N"
                     /note="PapC N-terminal domain; pfam13954"
                     /db_xref="CDD:433603"
     Region          138..558
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
ORIGIN      
        1 mtafraafka yrmhqvlimp rfarltialg latavfpvda eyyfnprfls ndlaesvdls
       61 aftkgreapp gtyrvdiyln defmtsrdit fiaddnnael ipclstdllv slgikkiall
      121 dnkehsaekh vpdnsactpl qdrladaste fdvgqqhlsl svpqiyvgrm argyaparfg
      181 vysntdaqdg ipltetflpe lfqnhgyyta avgkwhlski snvpvpedkq trdyhdnftt
      241 fsaeewqpqn rgfdyfmgfh aagtayynsp slfknrervp akgyisdqlt deaigvvdra
      301 ktldqpfmly laynaphlpn dnpapdqyqk qfntgsqtad nyyasvysvd qgvkrileql
      361 kkngqydnti ilftsdngav idgplplnga qkgyksqtyp ggthtpmfmw wkgklqpgny
      421 dklisamdfy ptaldaadis ipkdlkldgv sllpwlqdkk qgephknltw itsyshwfde
      481 enipfwdnyh kfvrhqsddy phnpntedls qfsytvrnnd yslvytvenn qlglykltdl
      541 qqkdnlaaan pqvvkemqgv vrefidssqp plsevnqekf nnikkalsea k
//
LOCUS       WP_235256417             477 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Escherichia coli].
ACCESSION   WP_235256417
VERSION     WP_235256417.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..477
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=50669
     Region          17..422
                     /region_name="2A0115"
                     /note="benzoate transport; TIGR00895"
                     /db_xref="CDD:273327"
ORIGIN      
        1 msqitspaty sisrpqdvid ivnknsaint sigvifialg gilidayqaa mvgfgnkyia
       61 aqfgispgla atvnasvlia aliggllanr vinrfgqkra fiigmglcti gaaavaiaps
      121 iwwvlvcrvi mgfglgidfp latnavaelr gstskktgts vnlwqmawyv sttvvylvll
      181 plllsgiaee qlwrygifig aifavifmil ryffigesam waarvgryqe acdilgkryg
      241 vqarvaasst teakfsekae nkysggygil fndryrkrti lgcvvatmqa wqynavgvyl
      301 pltlagiisg gltgaltgsa vvnalcgvtg gmigsfilqr lgtrrqsmyg favvtlalls
      361 lgaltttnpw lslgllgsii ffhsagpggl gmtiatlsyp pairptgvgf araimrtgai
      421 aglifwpmlw galkteafyw laivpflgfl tcvlinwepl ganvdaedae vlaelkk
//
LOCUS       WP_235256430             364 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1737 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235256430
VERSION     WP_235256430.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08410.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>364
                     /product="DUF1737 domain-containing protein"
     Region          5..50
                     /region_name="DUF1737"
                     /note="Domain of unknown function (DUF1737); cl10503"
                     /db_xref="CDD:471980"
     Region          66..>261
                     /region_name="SASA"
                     /note="Carbohydrate esterase, sialic acid-specific
                     acetylesterase; pfam03629"
                     /db_xref="CDD:427409"
ORIGIN      
        1 msikhydvvr aaspsdlaek lthklkegwq pfgspvaitp ytlmqaiaae gdvvvsgate
       61 pewyyvivla gqsnamayge glplpdsyda pdprikqlar rstvtpggaa cryndiipad
      121 hclhdvqdms tlnhpkadls kgqygcvgqg lhiakkllpy ipnnagillv pccrggsaft
      181 qgaegtfsad tgasqdsarw gvgkplyqdl iartkaalqk npknvllavc wmqgefdmsa
      241 athaqqpalf tamlkqfrad ltvfnaqchg gsaadvpwic gdttyywknt yatqydtvyg
      301 gyknresegv yfvpfmtdgn gvntatnapa edpdipasgy ygaasrtngn qvssnrpthf
      361 sswa
//
LOCUS       WP_235256485             120 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase, partial [Escherichia coli].
ACCESSION   WP_235256485
VERSION     WP_235256485.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024831.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13439.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>120
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
     Region          3..>97
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mmkilftess sdiggqelqa laqmtalqkq ghsvllacre kskiapeark rghdvtfipf
       61 rnslhlpsil rlrriigefk pdlvichsgh dsniaglsrl icchrfsivr qktyitrktr
//
LOCUS       WP_235256516             317 aa            linear   BCT 02-MAR-2025
DEFINITION  tape measure protein, partial [Escherichia coli].
ACCESSION   WP_235256516
VERSION     WP_235256516.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040129.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20155.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>317
                     /product="tape measure protein"
     Region          40..229
                     /region_name="TMP_3"
                     /note="Tape measure protein; pfam20155"
                     /db_xref="CDD:466312"
ORIGIN      
        1 aaareqrral aelhsqltei rasavgmtga fagafatghl isladewssv narlkqasqs
       61 sdefassqkv lmdisqrtgt afsdnaalfa rsaasmreyg ysaddvlkvt eaistglkis
      121 gastaeagsv itqfsqalaq gvlrgeefns vnesgdrivr alaagmgvar kdlkamaddg
      181 kltadkvvpa lisqlgilrd eyaampetvs ssirkvenaf mawvgganea sgvtktlsgm
      241 lngvagqien vatavgalva vgvaryfgnm asgamsatag lvtaarneva laeaqfrgtq
      301 iatararaav yraqqav
//
LOCUS       WP_235256492             195 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase TerL endonuclease subunit, partial [Escherichia coli].
ACCESSION   WP_235256492
VERSION     WP_235256492.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 195)
  AUTHORS   Xu,R.G., Jenkins,H.T., Chechik,M., Blagova,E.V., Lopatina,A.,
            Klimuk,E., Minakhin,L., Severinov,K., Greive,S.J. and Antson,A.A.
  TITLE     Viral genome packaging terminase cleaves DNA using the canonical
            RuvC-like two-metal catalysis mechanism
  JOURNAL   Nucleic Acids Res 45 (6), 3580-3590 (2017)
   PUBMED   28100693
REFERENCE   2  (residues 1 to 195)
  AUTHORS   Hilbert,B.J., Hayes,J.A., Stone,N.P., Duffy,C.M., Sankaran,B. and
            Kelch,B.A.
  TITLE     Structure and mechanism of the ATPase that powers viral genome
            packaging
  JOURNAL   Proc Natl Acad Sci U S A 112 (29), E3792-E3799 (2015)
   PUBMED   26150523
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042863.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20441.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..195
                     /product="terminase TerL endonuclease subunit"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
     Region          <1..187
                     /region_name="YmfN"
                     /note="Phage terminase-like protein, large subunit,
                     contains N-terminal HTH domain [Mobilome: prophages,
                     transposons]; COG4626"
                     /db_xref="CDD:443665"
ORIGIN      
        1 glddllgmyv tgrdretrew lgwghawvhe tavvrrksea srfqdfvacg dmtivrrvgd
       61 dtaevaeyvr riheaelldh igidpsgvgq ildslaeagi pdesvvgisq gwklggaikt
      121 terklaegvl vhggqplmaw cvgnarvepk gnailitkqa sgrgkidplm alfnavslms
      181 lnpepkkkey vvffi
//
LOCUS       WP_235256519             285 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_235256519
VERSION     WP_235256519.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>285
                     /product="DUF6531 domain-containing protein"
     Region          1..>285
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
ORIGIN      
        1 mtrkgldivq gsagvligap tgvacsvcpk kkdspnygnp vnpvlgakvl pgetdialpg
       61 plpfilsray ssyrtrtpap vgvfgpgwka pfdirlqird eglilndsgg rsihfeplfp
      121 geisysrses lwlarggvaa qhssqplsal wqvlpedvrl sphvylatns lqgpwwilsw
      181 pervpgadev lpppppayrv ltgvvdgfgr tlafhraakg dvagavtgvt dgagrrfhla
      241 lttqaqraea frkqrassls spasprsvss sqvfpdtlpa gteyg
//
LOCUS       WP_235256521             192 aa            linear   BCT 02-MAR-2025
DEFINITION  Ail/Lom family outer membrane beta-barrel protein [Escherichia
            coli].
ACCESSION   WP_235256521
VERSION     WP_235256521.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 192)
  AUTHORS   Miller,V.L., Beer,K.B., Heusipp,G., Young,B.M. and Wachtel,M.R.
  TITLE     Identification of regions of Ail required for the invasion and
            serum resistance phenotypes
  JOURNAL   Mol Microbiol 41 (5), 1053-1062 (2001)
   PUBMED   11555286
REFERENCE   2  (residues 1 to 192)
  AUTHORS   Barondess,J.J. and Beckwith,J.
  TITLE     A bacterial virulence determinant encoded by lysogenic coliphage
            lambda
  JOURNAL   Nature 346 (6287), 871-874 (1990)
   PUBMED   2144037
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06316.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..192
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /GO_component="GO:0044384 - host outer membrane [Evidence
                     IEA]"
                     /calculated_mol_wt=20770
     Region          1..192
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mlsaaiclav sgapawaseq qatlsagylh vstnvpgsde lnginvkyry eftdtlglit
       61 sfsyanaede kkthysdtrw hedsfrnrwf svmagpsvrv newfsayama gvayscvstf
      121 sgdylqvtdn kgkthdvltg sddgrhsnts lawgagvqfn piesvaidia yegsgsgdwr
      181 tdgfivgvgy kf
//
LOCUS       WP_235256535             187 aa            linear   BCT 02-MAR-2025
DEFINITION  prophage tail fiber N-terminal domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_235256535
VERSION     WP_235256535.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019996.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08400.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>187
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
     Region          1..141
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
ORIGIN      
        1 mavkisgvlk dgtgkpiqnc tiqlkarrns ttvvvntvas enpdeagrys mdveygqysv
       61 tllvegfpps hagtitvyed sqpgtlndfl gamseddvrp eamrrfelmv eeaarhaeea
      121 kknageaets arnagisasq aeesaanadt sagdasesar qaaesaaaak qseeassssa
      181 saaaqka
//
LOCUS       WP_235256539             185 aa            linear   BCT 02-MAR-2025
DEFINITION  prophage tail fiber N-terminal domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_235256539
VERSION     WP_235256539.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019996.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08400.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>185
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
     Region          <1..90
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
ORIGIN      
        1 dveygqysvi llvegfppsh agtitvyeds qpgtlndflg amseddvrpe alrrfelmve
       61 eaarhaeeak knageaetsa rnagisasqa eksaanadts aedasesarq aaesaasakk
      121 seeassssas eaaqkasesl qsatdaelsk ktaesaagna ardattatek aresaesaqs
      181 aeqsr
//
LOCUS       WP_235256935             371 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Octadecabacter algicola].
ACCESSION   WP_235256935
VERSION     WP_235256935.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..371
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=40320
     Region          29..313
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mkltktllat talglsaasv madghmssdm tlvswggayq asqsaaysdp yvamnegvtv
       61 twdessaeav aklramneag sitwdvvdvv aadalrlcde glaleidade qlapapdgts
      121 aeddfgdllv gdcfipqivy sttfgyrtdl vpdgvdapdn icdvfdlety pgmralekrp
      181 innvewallc dgvakedvyd vlsteegqeq alakldtird sviwwsagad tpqlladgev
      241 fmgstyngrl faaieeqdqp igmmwdaqvf dldgwiipag lseerearal dfvyfatdtq
      301 rladqakyis ygparmssap lvgqhatlgi dmaphmptdp nnaantflyn yefwadyrdd
      361 idakfqawla q
//
LOCUS       WP_235257039             259 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Octadecabacter algicola].
ACCESSION   WP_235257039
VERSION     WP_235257039.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..259
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=26238
     Region          7..255
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(14,16..17,19,38..40,88..90,138..140,153,157,
                     183..186)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(112,140,153,157)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mdmgikgkra lvcasskglg rgcaealaae gvdlvlnarg adalettaqa irdehgvdvv
       61 tvaadvttqd gqsavikaaq gvdilvtnag gpppgswadw grddfiaald anmltpiali
      121 qalvptmmdr gwgrvvnits gsvkapipvl glsntartgl tgfvagtsrq vagsgvtinn
      181 llpgihatdr aqsldkgvsd aqgismeqak tnreatipag rygtreefga acaflcsdka
      241 gfivgqnlll dggavnati
//
LOCUS       WP_235256916             537 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome ubiquinol oxidase subunit I [Octadecabacter algicola].
ACCESSION   WP_235256916
VERSION     WP_235256916.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 537)
  AUTHORS   Juty,N.S., Moshiri,F., Merrick,M., Anthony,C. and Hill,S.
  TITLE     The Klebsiella pneumoniae cytochrome bd' terminal oxidase complex
            and its role in microaerobic nitrogen fixation
  JOURNAL   Microbiology (Reading) 143 (Pt 8), 2673-2683 (1997)
   PUBMED   9274021
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013791.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01654.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..537
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /EC_number="1.10.3.-"
                     /GO_component="GO:0070069 - cytochrome complex [Evidence
                     IEA]"
                     /GO_function="GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /GO_process="GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /calculated_mol_wt=60278
     Region          5..504
                     /region_name="Cyt_bd_oxida_I"
                     /note="Cytochrome bd terminal oxidase subunit I; cl00562"
                     /db_xref="CDD:469822"
ORIGIN      
        1 meiglvelsr mqfaftamyh flfvpltlgl silvaimetv yvmtnrpiwr qmtkfwgtlf
       61 ginfaigvat gitmefqfgm nwsyyshyvg difgaplaie glmaffleat fvglfffgwd
      121 klskvqhmvv awlvaigsnf salwiliang wmqnpvgaef npetmrmemt sffevlfnev
      181 aqakfvhtvs agyvtasvfv lgvsalyliq nkhkdlarrs iavssafgla aalsvvvlgd
      241 esgysashtq rmklaaieam whtepapasf tligfpdqea rethyavhip wamgligtrs
      301 ltteipgine lveesevrir dgliaydalm tireqrdatp qavrdtfeah senlgysyll
      361 kryvddprda teeqiqmaad dtvpgvaplf wafrimvglg fsfiavmayf fyrasfrqmq
      421 fprwslyaav aiiptpwiaa elgwfvaefg rqpwtvdgvl ptamsashls iadllitlag
      481 flifysvlfv iemslmvkyi rkgpfqdvde tnewqerhea rlrtaidipt sntkpae
//
LOCUS       WP_235257069             150 aa            linear   BCT 02-MAR-2025
DEFINITION  paraquat-inducible protein A [Octadecabacter algicola].
ACCESSION   WP_235257069
VERSION     WP_235257069.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 150)
  AUTHORS   Koh,Y.S. and Roe,J.H.
  TITLE     Isolation of a novel paraquat-inducible (pqi) gene regulated by the
            soxRS locus in Escherichia coli
  JOURNAL   J Bacteriol 177 (10), 2673-2678 (1995)
   PUBMED   7751275
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04403.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..150
                     /product="paraquat-inducible protein A"
                     /calculated_mol_wt=16050
     Region          10..139
                     /region_name="PqiA"
                     /note="Paraquat-inducible protein A; pfam04403"
                     /db_xref="CDD:461293"
ORIGIN      
        1 mlnalrianl sllilfpiaw fapllraall pifgmdeisv isglqslwgs dvflalivta
       61 favfapylkt iglalvhfdl lkaqvlpvlg ylgklamadi flialyvvvv kgagrvtveg
      121 gwglylftgc vlasilvsil tirhikkttp
//
LOCUS       WP_235257126             345 aa            linear   BCT 02-MAR-2025
DEFINITION  FliG C-terminal domain-containing protein [Octadecabacter
            algicola].
ACCESSION   WP_235257126
VERSION     WP_235257126.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 345)
  AUTHORS   Lloyd,S.A., Whitby,F.G., Blair,D.F. and Hill,C.P.
  TITLE     Structure of the C-terminal domain of FliG, a component of the
            rotor in the bacterial flagellar motor
  JOURNAL   Nature 400 (6743), 472-475 (1999)
   PUBMED   10440379
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013838.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01706.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..345
                     /product="FliG C-terminal domain-containing protein"
                     /calculated_mol_wt=35730
     Region          5..345
                     /region_name="FliG"
                     /note="Flagellar motor switch protein FliG [Cell
                     motility]; COG1536"
                     /db_xref="CDD:441145"
ORIGIN      
        1 msstmpqatt pvlprsrkaa mvvqlllrdg gdlplsqlpe aaqarltrel gglniidret
       61 lknvaiefaa elsdvaltap gsveaalksl dgrisastva rlreeaaaqn gsdpwaivle
      121 ltademvpit aaespevsai llsklptska atllglvpge tarriafsms ktsniradai
      181 arigtglaqh ycgaalpafs etaesrvgai lnsspaatre qvlegllsed psfgegvrka
      241 iftfadipar lavpdvpkil rdidssdlvr alasaaatgg plavaanyll dnmsnrmadn
      301 lreemgeagk iklsdaeaaq navvtairaa adagtitliv dgddd
//
LOCUS       WP_235257521             232 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3307 domain-containing protein [Octadecabacter algicola].
ACCESSION   WP_235257521
VERSION     WP_235257521.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023178.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11750.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..232
                     /product="DUF3307 domain-containing protein"
                     /calculated_mol_wt=24388
     Region          5..116
                     /region_name="DUF3307"
                     /note="Protein of unknown function (DUF3307); pfam11750"
                     /db_xref="CDD:432048"
ORIGIN      
        1 mietftallf ahvladfvlq tgamvkhkrh ggvmllhaal vlataqaatg hltapeilal
       61 taahavidci ktngnfrgmt afavdqaahv vtiaavafya pqlwatgqwa aypqalpami
      121 iatgaivtli agqhtvallm kphsmrirnn glrdggrqig llerglifvf iltglplgvg
      181 flvgaksvlr fgtasrdqrt aeyviigtla sfgwaicaal ltqyaltllp ps
//
LOCUS       WP_235257558             439 aa            linear   BCT 02-MAR-2025
DEFINITION  M48 family metalloprotease [Octadecabacter algicola].
ACCESSION   WP_235257558
VERSION     WP_235257558.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 439)
  AUTHORS   Quigley,A., Dong,Y.Y., Pike,A.C., Dong,L., Shrestha,L.,
            Berridge,G., Stansfeld,P.J., Sansom,M.S., Edwards,A.M., Bountra,C.,
            von Delft,F., Bullock,A.N., Burgess-Brown,N.A. and Carpenter,E.P.
  TITLE     The structural basis of ZMPSTE24-dependent laminopathies
  JOURNAL   Science 339 (6127), 1604-1607 (2013)
   PUBMED   23539603
REFERENCE   2  (residues 1 to 439)
  AUTHORS   Pryor,E.E. Jr., Horanyi,P.S., Clark,K.M., Fedoriw,N.,
            Connelly,S.M., Koszelak-Rosenblum,M., Zhu,G., Malkowski,M.G.,
            Wiener,M.C. and Dumont,M.E.
  TITLE     Structure of the integral membrane protein CAAX protease Ste24p
  JOURNAL   Science 339 (6127), 1600-1604 (2013)
   PUBMED   23539602
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013594.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01435.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..439
                     /product="M48 family metalloprotease"
                     /EC_number="3.4.24.-"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=47052
     Region          38..222
                     /region_name="M48C_Oma1-like"
                     /note="Oma1 peptidase-like, integral membrane
                     metallopeptidase; cd07324"
                     /db_xref="CDD:320683"
     Site            order(98..99,102,165,169,211)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:320683"
     Site            order(98,102,165,211)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:320683"
     Region          272..393
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          272..297
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(273..274,277..278,280,304,307..308,311..312,
                     314..315,338,341..342,345..346,349)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          302..332
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          337..366
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mrlsvisltl svclafvsla rpaeavtllr dadiehsldq laapilraag lnpnnvrilv
       61 vndralnafv ingraifihs gllqrltsae qlqaiiahea ahianghisr rltnlrgann
      121 aagfgialal avalasdeaa aaggvalgaa saaqrqffah traeesaadq ssirfllrad
      181 vnpqgaievm dlfrgqells vsrqdpytrt hpltsdrira lrglvaanpg tdannpnadf
      241 wfaraqgkls aftqnpgwtl rrvrgddtpi gmmrravayh rqadatrais emqrllaqyp
      301 ndaywyelfg qillesrqpm aavqayqnav alngneplil ggygrallav nsadsnarav
      361 rtlerarald gqssgvlrdl gqayaltgqp glaslataer yalqgrmeda vihatraadr
      421 lprgsapwqr aqdvlsaar
//
LOCUS       WP_235257953              79 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-binding domain-containing protein [Octadecabacter algicola].
ACCESSION   WP_235257953
VERSION     WP_235257953.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015411.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03446.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..79
                     /product="NAD(P)-binding domain-containing protein"
                     /GO_function="GO:0050661 - NADP binding [Evidence IEA]"
                     /calculated_mol_wt=8292
     Region          17..>75
                     /region_name="MmsB"
                     /note="3-hydroxyisobutyrate dehydrogenase or related
                     beta-hydroxyacid dehydrogenase [Lipid transport and
                     metabolism]; COG2084"
                     /db_xref="CDD:441687"
ORIGIN      
        1 mtkphigfmg lglmggamvs rqqdqgydas vmgnrdrtef dkaiargate vasakdvakn
       61 sdfvmlckgt seqvegpll
//
LOCUS       WP_235257987             280 aa            linear   BCT 02-MAR-2025
DEFINITION  TPM domain-containing protein [Octadecabacter algicola].
ACCESSION   WP_235257987
VERSION     WP_235257987.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 280)
  AUTHORS   Wu,H.Y., Liu,M.S., Lin,T.P. and Cheng,Y.S.
  TITLE     Structural and functional assays of AtTLP18.3 identify its novel
            acid phosphatase activity in thylakoid lumen
  JOURNAL   Plant Physiol 157 (3), 1015-1025 (2011)
   PUBMED   21908686
REFERENCE   2  (residues 1 to 280)
  AUTHORS   Wegener,K.M., Bennewitz,S., Oelmuller,R. and Pakrasi,H.B.
  TITLE     The Psb32 protein aids in repairing photodamaged photosystem II in
            the cyanobacterium Synechocystis 6803
  JOURNAL   Mol Plant 4 (6), 1052-1061 (2011)
   PUBMED   21653280
REFERENCE   3  (residues 1 to 280)
  AUTHORS   Sirpio,S., Allahverdiyeva,Y., Suorsa,M., Paakkarinen,V.,
            Vainonen,J., Battchikova,N. and Aro,E.M.
  TITLE     TLP18.3, a novel thylakoid lumen protein regulating photosystem II
            repair cycle
  JOURNAL   Biochem J 406 (3), 415-425 (2007)
   PUBMED   17576201
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016424.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04536.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..280
                     /product="TPM domain-containing protein"
                     /calculated_mol_wt=29268
     Region          2..>182
                     /region_name="YgcG"
                     /note="Uncharacterized membrane protein YgcG, contains a
                     TPM-fold domain [Function unknown]; COG1512"
                     /db_xref="CDD:441121"
     Region          212..250
                     /region_name="Nudix_N_2"
                     /note="Nudix N-terminal; pfam14803"
                     /db_xref="CDD:464323"
ORIGIN      
        1 mirlfavlaa lfvtnpliaq typdrtadgv ndfadiidag tetrivekls diaddhdtei
       61 vivtlssvrf yaqntaiaey atnlfntwgi gdadantgil ilvfrddglm rietgsgyda
      121 aaqaqvdlvv sediighfrn ddfaqgldag vdgllarlid ppaandtatp ktgstessgn
      181 tmyyilgaia agiagivgln rrsaakfaaq pcskcgktgl eksrvvlrep tnnaagdget
      241 ritcpscghv dttpytiskl ktetpkgggk sqgggstgkf
//
LOCUS       WP_235258507             296 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase [Octadecabacter algicola].
ACCESSION   WP_235258507
VERSION     WP_235258507.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 296)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..296
                     /product="PfkB family carbohydrate kinase"
                     /calculated_mol_wt=30598
     Region          6..287
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
     Site            order(44,256,259)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238177"
     Site            order(194,228,254,257..258,261)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238177"
ORIGIN      
        1 mtqpdilcig svlwdiigrs sshmragsdv pgritripgg vamniamtli nfgltpalls
       61 avgrdpegde lvaeadqlgm itntlyrsed lptdsymave gangliaaia dahsleragt
      121 kilrpmsegp lgtpdapwdg lvaldgnltr ellgdiaksp lfaksdlrva paspgkaerl
      181 lalvghasat lyvnleeagl lcqttfdlat daakaltvrg vhrclvtdgg nlaaeghgns
      241 irtaqppevl vtrvtgagdt fmaahiasev qgmdpqaale ralnaaatyv sgetpt
//
LOCUS       WP_235258549             157 aa            linear   BCT 02-MAR-2025
DEFINITION  metal-dependent hydrolase [Octadecabacter algicola].
ACCESSION   WP_235258549
VERSION     WP_235258549.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Zhang,Y. and Lin,K.
  TITLE     A phylogenomic analysis of Escherichia coli / Shigella group:
            implications of genomic features associated with pathogenicity and
            ecological adaptation
  JOURNAL   BMC Evol Biol 12, 174 (2012)
   PUBMED   22958895
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 157)
  AUTHORS   Fernandez De Henestrosa,A.R., Ogi,T., Aoyagi,S., Chafin,D.,
            Hayes,J.J., Ohmori,H. and Woodgate,R.
  TITLE     Identification of additional genes belonging to the LexA regulon in
            Escherichia coli
  JOURNAL   Mol Microbiol 35 (6), 1560-1572 (2000)
   PUBMED   10760155
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016214.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04307.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..157
                     /product="metal-dependent hydrolase"
                     /calculated_mol_wt=18109
ORIGIN      
        1 mitahipsgy vfgrllqnsg arwplilpaa vvggilpdfd miwfyliddr afhhhrywvh
       61 ipafwalvai avlpplalta krflpaalaf faalflhlcl dtlagdilwh wpwsndfthf
      121 vtipavydww vlnfvlhwvf gleiliwvaa vwlwikr
//
LOCUS       WP_235258751             512 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase HerA-like domain-containing protein [Octadecabacter
            algicola].
ACCESSION   WP_235258751
VERSION     WP_235258751.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 512)
  AUTHORS   Huang,Q., Liu,L., Liu,J., Ni,J., She,Q. and Shen,Y.
  TITLE     Efficient 5'-3' DNA end resection by HerA and NurA is essential for
            cell viability in the crenarchaeon Sulfolobus islandicus
  JOURNAL   BMC Mol Biol 16, 2 (2015)
   PUBMED   25880130
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 512)
  AUTHORS   Rzechorzek,N.J., Blackwood,J.K., Bray,S.M., Maman,J.D.,
            Pellegrini,L. and Robinson,N.P.
  TITLE     Structure of the hexameric HerA ATPase reveals a mechanism of
            translocation-coupled DNA-end processing in archaea
  JOURNAL   Nat Commun 5, 5506 (2014)
   PUBMED   25420454
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 512)
  AUTHORS   Constantinesco,F., Forterre,P., Koonin,E.V., Aravind,L. and Elie,C.
  TITLE     A bipolar DNA helicase gene, herA, clusters with rad50, mre11 and
            nurA genes in thermophilic archaea
  JOURNAL   Nucleic Acids Res 32 (4), 1439-1447 (2004)
   PUBMED   14990749
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017669.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05872.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..512
                     /product="helicase HerA-like domain-containing protein"
                     /calculated_mol_wt=55182
     Region          20..512
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 msngifvggg gdgygtaqel qyqyanrhgl iagatgtgkt vtlqilaegf saagvpvfls
       61 dvkgdlsgla ksgtadfklh epfmkraeti gldlqydsfp vtfwdllgeq ghpirttvae
      121 mgplllsslm glteaqegvl nvafrvaded glplldledl qallvwvgqn skdlslrygn
      181 vasssvgaiq rqllvlenqg gaelfgepal dlhdmmhtea dgrgrinila sdklmaspkl
      241 yatfllwlls elfeelpevg npdkpklvff fdeahllfdd apkalvdkve qvarlirskg
      301 vgvyfitqnp advpedvlgq lgnrvqhalr aftakdqkel kqaadtyrpn plfdtaeair
      361 evgtgeavts mlmdkgvpgi vertlirpps sqlgpitkae raevmavspm sgkyderldr
      421 nsaaemlakr agdaakaaee aeaqeeklea eerehkqgrr ytgsdgerst srrssskdgw
      481 ggaiatavak elkgttgrri vrgilgglfk gr
//
LOCUS       WP_235258459             302 aa            linear   BCT 02-MAR-2025
DEFINITION  type IV pili methyl-accepting chemotaxis transducer N-terminal
            domain-containing protein [Octadecabacter algicola].
ACCESSION   WP_235258459
VERSION     WP_235258459.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 302)
  AUTHORS   Piepenbrink,K.H., Maldarelli,G.A., de la Pena,C.F., Mulvey,G.L.,
            Snyder,G.A., De Masi,L., von Rosenvinge,E.C., Gunther,S.,
            Armstrong,G.D., Donnenberg,M.S. and Sundberg,E.J.
  TITLE     Structure of Clostridium difficile PilJ exhibits unprecedented
            divergence from known type IV pilins
  JOURNAL   J Biol Chem 289 (7), 4334-4345 (2014)
   PUBMED   24362261
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025055.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13675.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..302
                     /product="type IV pili methyl-accepting chemotaxis
                     transducer N-terminal domain-containing protein"
                     /calculated_mol_wt=33400
     Region          44..133
                     /region_name="PilJ"
                     /note="Type IV pili methyl-accepting chemotaxis transducer
                     N-term; pfam13675"
                     /db_xref="CDD:433397"
ORIGIN      
        1 mntsakvdrr dslklaktlt lasagilafs atqaaaavdi shkikiagdl rmftqrmals
       61 aafvmldvek dhylevltee ydeftddida lrngdpefsm apeenalvle aintvefgws
      121 vlgpplkdvi dtgtvddehf saiehvntqv mtltdslihr illeykdaip ldlayqidvv
      181 gslrmlsqkm ikeailvale feaeahheml vgsmqlfrfd ldklagnmah nehtlpaatg
      241 efaehlthae hcwvklqpil ekldqthave yaevlelahe advilaalda mneilikqad
      301 ea
//
LOCUS       WP_235258820             275 aa            linear   BCT 02-MAR-2025
DEFINITION  polysaccharide pyruvyl transferase family protein [Octadecabacter
            algicola].
ACCESSION   WP_235258820
VERSION     WP_235258820.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 275)
  AUTHORS   Mesnage,S., Fontaine,T., Mignot,T., Delepierre,M., Mock,M. and
            Fouet,A.
  TITLE     Bacterial SLH domain proteins are non-covalently anchored to the
            cell surface via a conserved mechanism involving wall
            polysaccharide pyruvylation
  JOURNAL   EMBO J 19 (17), 4473-4484 (2000)
   PUBMED   10970841
REFERENCE   2  (residues 1 to 275)
  AUTHORS   Becker,A., Kleickmann,A., Kuster,H., Keller,M., Arnold,W. and
            Puhler,A.
  TITLE     Analysis of the Rhizobium meliloti genes exoU, exoV, exoW, exoT,
            and exoI involved in exopolysaccharide biosynthesis and nodule
            invasion: exoU and exoW probably encode glucosyltransferases
  JOURNAL   Mol Plant Microbe Interact 6 (6), 735-744 (1993)
   PUBMED   8118055
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016145.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04230.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..275
                     /product="polysaccharide pyruvyl transferase family
                     protein"
                     /calculated_mol_wt=29538
     Region          <62..204
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mtynsplklf yynkeqnfgd aisativahv agrdvvwagh kncemyalgs lmkmvknnqn
       61 eprekggkpf iwgtgamsgi adlsflknvr vallrgpita allqrddrlf gdtgmliaea
      121 ltaldgdtpe rqdivglvph mhfadderfa kiaadnphik lidvrnpdph avvreiascs
      181 hvisqslhgl itadaygipn twldplgihg gamlkfhdya agigralgtp iepheivdva
      241 igapngalpy adgiaiakea lfesfpaglk qreaa
//
LOCUS       WP_235258859             111 aa            linear   BCT 02-MAR-2025
DEFINITION  SMR family transporter [Octadecabacter algicola].
ACCESSION   WP_235258859
VERSION     WP_235258859.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 111)
  AUTHORS   Yerushalmi,H., Lebendiker,M. and Schuldiner,S.
  TITLE     EmrE, an Escherichia coli 12-kDa multidrug transporter, exchanges
            toxic cations and H+ and is soluble in organic solvents
  JOURNAL   J Biol Chem 270 (12), 6856-6863 (1995)
   PUBMED   7896833
REFERENCE   2  (residues 1 to 111)
  AUTHORS   Parent,R. and Roy,P.H.
  TITLE     The chloramphenicol acetyltransferase gene of Tn2424: a new breed
            of cat
  JOURNAL   J Bacteriol 174 (9), 2891-2897 (1992)
   PUBMED   1314803
REFERENCE   3  (residues 1 to 111)
  AUTHORS   Sasatsu,M., Shima,K., Shibata,Y. and Kono,M.
  TITLE     Nucleotide sequence of a gene that encodes resistance to ethidium
            bromide from a transferable plasmid in Staphylococcus aureus
  JOURNAL   Nucleic Acids Res 17 (23), 10103 (1989)
   PUBMED   2602117
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013089.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00893.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..111
                     /product="SMR family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /calculated_mol_wt=11926
     Region          5..111
                     /region_name="EamA"
                     /note="EamA-like transporter family; cl23754"
                     /db_xref="CDD:474045"
ORIGIN      
        1 mpthfitlfv avifetigtt alqasqqftk fgpsvvvvis yalafyllal tlkhmpvgim
       61 yaiwsgsgiv lialigwvvf rqtldlpail gmgmilcgil viqlfsktav h
//
LOCUS       WP_235258941             143 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF302 domain-containing protein [Octadecabacter algicola].
ACCESSION   WP_235258941
VERSION     WP_235258941.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 143)
  AUTHORS   Kishishita,S., Tatsuguchi,A., Ushikoshi-Nakayama,R., Terada,T.,
            Kuramitsu,S., Park,S.Y., Tame,J.R., Shirouzu,M. and Yokoyama,S.
  TITLE     Crystal structure of a conserved hypothetical protein TT1751 from
            Thermus thermophilus HB8
  JOURNAL   Proteins 57 (4), 883-887 (2004)
   PUBMED   15481054
REFERENCE   2  (residues 1 to 143)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015581.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03625.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..143
                     /product="DUF302 domain-containing protein"
                     /calculated_mol_wt=15322
     Region          25..138
                     /region_name="COG3439"
                     /note="Uncharacterized conserved protein, DUF302 family
                     [Function unknown]"
                     /db_xref="CDD:442664"
ORIGIN      
        1 mknliiaacl taagtmavae estyytfdgs fgdatfsven aiigqglvid yvshtgemln
       61 rtgedvgsdi vlfteadifv fcsaslsrev meadpmniah cpygifvaer dgevmigyrn
      121 ypegemqkvq slldeivqda lgg
//
LOCUS       WP_235259076             275 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfotransferase domain-containing protein [Octadecabacter
            algicola].
ACCESSION   WP_235259076
VERSION     WP_235259076.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 275)
  AUTHORS   Kakuta,Y., Pedersen,L.G., Carter,C.W., Negishi,M. and Pedersen,L.C.
  TITLE     Crystal structure of estrogen sulphotransferase
  JOURNAL   Nat Struct Biol 4 (11), 904-908 (1997)
   PUBMED   9360604
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012888.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00685.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..275
                     /product="sulfotransferase domain-containing protein"
                     /GO_function="GO:0015016 - [heparan sulfate]-glucosamine
                     N-sulfotransferase activity [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=31616
     Region          <76..190
                     /region_name="Sulfotransfer_3"
                     /note="Sulfotransferase family; cl46325"
                     /db_xref="CDD:480665"
ORIGIN      
        1 mtpvtktdar flcvgthhkt gtiwmrkvlr aisndqnvpf mqcyrakkla eaaetgpqii
       61 vnwsssfpqq llemgharfi hiirdprdvl lsgmryhria plgnekflre krdewggkny
      121 qdhlnalpdd harlmfemen khdktvqeml nwpyeygvpn drvadikyed liedtdcaif
      181 rgmleecdid gididkavqs ywdrslfggl amkddredrv alhvssgkka qwvtklprei
      241 aepyaeryad alktlgyaen sdwvkdclpa keiaa
//
LOCUS       WP_235259100             288 aa            linear   BCT 02-MAR-2025
DEFINITION  ThiF family adenylyltransferase [Octadecabacter algicola].
ACCESSION   WP_235259100
VERSION     WP_235259100.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 288)
  AUTHORS   Lee,I. and Schindelin,H.
  TITLE     Structural insights into E1-catalyzed ubiquitin activation and
            transfer to conjugating enzymes
  JOURNAL   Cell 134 (2), 268-278 (2008)
   PUBMED   18662542
REFERENCE   2  (residues 1 to 288)
  AUTHORS   Lois,L.M. and Lima,C.D.
  TITLE     Structures of the SUMO E1 provide mechanistic insights into SUMO
            activation and E2 recruitment to E1
  JOURNAL   EMBO J 24 (3), 439-451 (2005)
   PUBMED   15660128
REFERENCE   3  (residues 1 to 288)
  AUTHORS   Lake,M.W., Wuebbens,M.M., Rajagopalan,K.V. and Schindelin,H.
  TITLE     Mechanism of ubiquitin activation revealed by the structure of a
            bacterial MoeB-MoaD complex
  JOURNAL   Nature 414 (6861), 325-329 (2001)
   PUBMED   11713534
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013094.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00899.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..288
                     /product="ThiF family adenylyltransferase"
                     /GO_function="GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /calculated_mol_wt=31807
     Region          2..286
                     /region_name="PRK08223"
                     /note="hypothetical protein; Validated"
                     /db_xref="CDD:181302"
     Region          10..>145
                     /region_name="ThiF"
                     /note="Molybdopterin or thiamine biosynthesis
                     adenylyltransferase [Coenzyme transport and metabolism];
                     COG0476"
                     /db_xref="CDD:440244"
ORIGIN      
        1 mfeyeefttr nigfvtraeq dkllgatvfv cgtggmggac ilglvragvg kliiadldef
       61 evsnlnrqvf afthtidghk aevtaeiarq inpeievevh hadwtkhvdd litrsvivvn
      121 gtddlgasll lyrraralgk tvidayaspl psiyvtlasd tpheerlgyp tndtswdavs
      181 ddqrsqafik esewvvihss srnyidldiv gdvvagkrsr msfgpmvitt gqlmcyevvn
      241 ailgrphgtd nrgyffnpyk arverpkpaf vaalmrpivr rflnglms
//
LOCUS       WP_235259144             236 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Octadecabacter algicola].
ACCESSION   WP_235259144
VERSION     WP_235259144.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 236)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..236
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=26452
     Region          1..227
                     /region_name="ompR"
                     /note="osmolarity response regulator; Provisional;
                     PRK09468"
                     /db_xref="CDD:181883"
ORIGIN      
        1 mtqkshhili vddargirep lgqylrkqgf rtslaenaie arqlieqagi dlaildimmp
       61 gedglslcrw mvantnipvi mltamadetd rivglelgad dyvvkpfnpr ellarikavl
      121 rrmperqyqs dnnsfagwth qgarkwlnhv dgrevsltts enrllavflq npntvlsrar
      181 llditagree kafdrtidnq igrlrkkied dpkapkllit ergggyvlav etvvpc
//
LOCUS       WP_235258943             422 aa            linear   BCT 02-MAR-2025
DEFINITION  FCSD flavin-binding domain-containing protein [Octadecabacter
            algicola].
ACCESSION   WP_235258943
VERSION     WP_235258943.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 422)
  AUTHORS   Chen,Z.W., Koh,M., Van Driessche,G., Van Beeumen,J.J.,
            Bartsch,R.G., Meyer,T.E., Cusanovich,M.A. and Mathews,F.S.
  TITLE     The structure of flavocytochrome c sulfide dehydrogenase from a
            purple phototrophic bacterium
  JOURNAL   Science 266 (5184), 430-432 (1994)
   PUBMED   7939681
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09242.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..422
                     /product="FCSD flavin-binding domain-containing protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=44303
     Region          49..358
                     /region_name="Ndh"
                     /note="NADH dehydrogenase, FAD-containing subunit [Energy
                     production and conversion]; COG1252"
                     /db_xref="CDD:440864"
     Region          355..421
                     /region_name="FCSD-flav_bind"
                     /note="Flavocytochrome c sulphide dehydrogenase,
                     flavin-binding; pfam09242"
                     /db_xref="CDD:462722"
ORIGIN      
        1 mkfnrrafig taaatagtla aptfaradgh gkprvvvvgg gaggataary iakdsngeid
       61 vtlieptray ytcffsnlyl ggfreidslg hsygtlastg invvhdwatg vdrdaktvtt
      121 aggytipydr lilspgidfv dgavagwdvs aqnamphayk agsqtellks qieampaggt
      181 yamvappnpf rcppgpyeri smvahllkei nptakiliad pkenfskqgl feegwnkhya
      241 gmiervgpdf ggadvevdpa amtlsidgdv nnvdvcnvip amkagkiadi agitegnwap
      301 vnaadlsskm denihvlgda caqgdmpksg fsansqakvc anavrgaltg stvfparfan
      361 tcwslidtnd gvkvgatyea tdekiakvdg fisetgessd vrqatyeesv gwydgitadm
      421 fg
//
LOCUS       WP_235259148             139 aa            linear   BCT 02-MAR-2025
DEFINITION  multicopper oxidase domain-containing protein [Octadecabacter
            algicola].
ACCESSION   WP_235259148
VERSION     WP_235259148.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 139)
  AUTHORS   Page,C.C., Moser,C.C., Chen,X. and Dutton,P.L.
  TITLE     Natural engineering principles of electron tunnelling in biological
            oxidation-reduction
  JOURNAL   Nature 402 (6757), 47-52 (1999)
   PUBMED   10573417
REFERENCE   2  (residues 1 to 139)
  AUTHORS   Grossmann,J.G., Ingledew,W.J., Harvey,I., Strange,R.W. and
            Hasnain,S.S.
  TITLE     X-ray absorption studies and homology modeling define the
            structural features that specify the nature of the copper site in
            rusticyanin
  JOURNAL   Biochemistry 34 (26), 8406-8414 (1995)
   PUBMED   7599131
REFERENCE   3  (residues 1 to 139)
  AUTHORS   Messerschmidt,A., Ladenstein,R., Huber,R., Bolognesi,M.,
            Avigliano,L., Petruzzelli,R., Rossi,A. and Finazzi-Agro,A.
  TITLE     Refined crystal structure of ascorbate oxidase at 1.9 A resolution
  JOURNAL   J Mol Biol 224 (1), 179-205 (1992)
   PUBMED   1548698
REFERENCE   4  (residues 1 to 139)
  AUTHORS   Messerschmidt,A. and Huber,R.
  TITLE     The blue oxidases, ascorbate oxidase, laccase and ceruloplasmin.
            Modelling and structural relationships
  JOURNAL   Eur J Biochem 187 (2), 341-352 (1990)
   PUBMED   2404764
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019351.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07731.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..139
                     /product="multicopper oxidase domain-containing protein"
                     /GO_function="GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=15536
     Region          35..136
                     /region_name="Cupredoxin"
                     /note="Cupredoxin superfamily; cl19115"
                     /db_xref="CDD:473140"
ORIGIN      
        1 mrfgptrtrs pgaglipfdd telpkreidf trnqtinrea fdgelkqtmt lgtaeawtvg
       61 nntqvmhvyh ihvnpffith ingealpegs plarwqdtlg gdvgfktrfe kftgsfvihc
      121 hvlphedngm mqivevvea
//
LOCUS       WP_235259185             764 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Octadecabacter
            algicola].
ACCESSION   WP_235259185
VERSION     WP_235259185.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 764)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 764)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 764)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 764)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..764
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=83252
     Region          79..758
                     /region_name="type_I_sec_LssB"
                     /note="type I secretion system ATPase, LssB family;
                     TIGR03375"
                     /db_xref="CDD:274550"
ORIGIN      
        1 msgpvlafdi natrggkltr vakpeaetda apasnvelpi raeveqvera iaaptstgdd
       61 rysdkaksra dlaatyagll gvdivrsdll evmttedgdd itpraiakal keagmvtsva
      121 ldakptpdqw palvemtsgq illildqtdd tfivfdttck dnraevslte fmphfsglil
      181 radmavkdla akharkgnka hwfwgemlqf rrhlleialg sfvanllava valfslqvyd
      241 rviphqstat lwvlaigagl amlleaglri ararlmdgag rkielqvqsl lmdrllgmrr
      301 gkegqtpsgl fsavrefgsv refftastig tltdlpfivl flalvasigg nvvwvlfigg
      361 tlmvlpsffl qkkmialthq tqgasaksnk llheviyead tikaqrgedr frrlwtelsa
      421 vsslatseqr klastltfwa qgvqqatyva avvagtfmvf tgeftvgtii avgiltsrtl
      481 gpltqlaatl arwsnvkaal ealgeiadae qdqeedrtyl rretmkggfe lrdiafcyne
      541 dsgqtldipg lkiepgqhia vlgsngsgks tmlkllsgiy rptkgrvlid gvdmgqvmpr
      601 dlrrsigyls qevrlfsgtl renlnltlle rdddrllaal dfaglgqfvr nhpkgldlei
      661 sdggeglsig qrqsigwarl wlqdpkvcll deptaaldqt leatlvsrle twlkgrtaii
      721 athrvpilel tqrtvilqng rlavdgprqe vlahlqknnk kasa
//
LOCUS       WP_235259274             582 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding protein [Octadecabacter algicola].
ACCESSION   WP_235259274
VERSION     WP_235259274.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 582)
  AUTHORS   Mittl,P.R. and Schulz,G.E.
  TITLE     Structure of glutathione reductase from Escherichia coli at 1.86 A
            resolution: comparison with the enzyme from human erythrocytes
  JOURNAL   Protein Sci 3 (5), 799-809 (1994)
   PUBMED   8061609
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013086.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00890.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..582
                     /product="FAD-binding protein"
                     /calculated_mol_wt=61648
     Region          52..553
                     /region_name="FAD_binding_2"
                     /note="FAD binding domain; cl46878"
                     /db_xref="CDD:481218"
ORIGIN      
        1 mtaptekpap nrreflalsg atagaaslgm aawgqnfvev dvdaitntdf atdvlviggg
       61 maglfaavka hdagastmiv skgrlgssgl tpfgkgffvf dtdvetdtid dfvdtvsrsa
      121 lgtsnpaytr qmaehsmara adlrewgyfd qtlsnrpfmk piedrdipll ervhvthlik
      181 edgkiagaag frndaeetvt iraksvilct gaggfkpngf plgdlthdgt imayeigakv
      241 tgkewndghm trsdnpaacy dgwgdmferv pstngvevhh dlgvdlnyta ymtgnpvagg
      301 pgaqpsdgdt ieveggpqtp eefqrdfgap ggdgegggps sgeggapgap ppgfepsanv
      361 ggasagmaih kseglvpfdd rcasniagly aagdalgshm sggiytqvgs sltgsavqga
      421 iageaaaeya etadtpviqd vriseivdei laplrldagy gpawvtqtlq gimipnfvly
      481 ikkasmmtaa layveelrdh hvpmlraanm helrlahetr nmilsaemkm raslmrtesr
      541 gshyrldypd mddvnwrawi niyqgtdgsm qlekqpfdtw pt
//
LOCUS       WP_235259309             243 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphate/phosphite/phosphonate ABC transporter substrate-binding
            protein [Octadecabacter algicola].
ACCESSION   WP_235259309
VERSION     WP_235259309.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 243)
  AUTHORS   Metcalf,W.W. and Wanner,B.L.
  TITLE     Evidence for a fourteen-gene, phnC to phnP locus for phosphonate
            metabolism in Escherichia coli
  JOURNAL   Gene 129 (1), 27-32 (1993)
   PUBMED   8335257
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11461398
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..243
                     /product="phosphate/phosphite/phosphonate ABC transporter
                     substrate-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=26244
     Region          39..237
                     /region_name="PhnD"
                     /note="ABC-type phosphate/phosphonate transport system,
                     periplasmic component [Inorganic ion transport and
                     metabolism]; COG3221"
                     /db_xref="CDD:442454"
ORIGIN      
        1 miarlpmydr penaaahdal wsgvrnilgy gepeidrkta yddgwgredl llgqicnfpy
       61 rasfrdrvtr igcadyglkd tpagyyhsvf vvrageasrg lapatlgrfa yndaqsqsgw
      121 gaplarvsem gltfhttikt gahydsmmav adgradlaai davtwrmfea weprvtelqv
      181 igrtglspgm tfitapqndp tpirealksa isnlapehan tlglrglavl pdaaydiala
      241 sap
//
LOCUS       WP_235259312             241 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein
            [Octadecabacter algicola].
ACCESSION   WP_235259312
VERSION     WP_235259312.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 241)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..241
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=25580
     Region          26..234
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mknivlataa valtstmala dghsvvrmgt egayapwnfi ndagevdgfe relgdelcar
       61 aeltcewvtn ewdsiipnlv sgnydtiiag msvtaerdei idftqaytpa dpsaylalda
      121 dldiegavva aqtgtiqasf iadqgwtvve fatpeetlaa vrggeadavl adqsflagal
      181 egqselvmle rkevlgggvg mgiresdtel retfdaaiqs mkddgtlnel ivkwevastf
      241 e
//
LOCUS       WP_235259321             148 aa            linear   BCT 02-MAR-2025
DEFINITION  phasin family protein [Octadecabacter algicola].
ACCESSION   WP_235259321
VERSION     WP_235259321.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020918.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09361.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..148
                     /product="phasin family protein"
                     /calculated_mol_wt=15231
ORIGIN      
        1 maaktqdfta vlkdvmgalp vdtkafeday ktqttlsekl savsidaakk steisakwaq
       61 dtlskittva sakaepadya ksvtdfasas aeaaaenmaa faeiakkvqt etlellmaag
      121 kdmgedmsaa akkatddvta aakkatak
//
LOCUS       WP_235259368             591 aa            linear   BCT 02-MAR-2025
DEFINITION  trypsin-like peptidase domain-containing protein [Octadecabacter
            algicola].
ACCESSION   WP_235259368
VERSION     WP_235259368.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024758.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13365.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..591
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /calculated_mol_wt=63665
     Region          <169..221
                     /region_name="PGRP"
                     /note="Peptidoglycan-binding (PGRP) domain of
                     peptidoglycan hydrolases [Cell wall/membrane/envelope
                     biogenesis]; COG3409"
                     /db_xref="CDD:442635"
     Region          396..525
                     /region_name="Trypsin_2"
                     /note="Trypsin-like peptidase domain; pfam13365"
                     /db_xref="CDD:433149"
ORIGIN      
        1 mfrilsalvv slflalpaaa qqsvwvqiea qrtltgaqda argyaargvd dvtgfalpgg
       61 wygialgpys aadaasqlrs lralglipsd sytvdgrrfr tqfwpvgvtt stdpvaiqtp
      121 tqtepentpv ttadpepvvv pepdpiqtpd etlreaqase qaldrdekrl lqtalqwagf
      181 ynsaidgsyg rgtrqsmrdw qeaknhevtg vlttnqrael lndynsildg iglqlvrdda
      241 tgieiqiptg vvefaeyepp farfdasgdl saqvllisqp gdqtrmfgly eilqtlaiip
      301 pegdrrrrdr gfeiegiden ihsytsvvle ngeikgfilv wpagdderrr riltemqasf
      361 atvdgvldpa isrpdedqai dliaglavrk pvrdrsgfyi ntagevltsv eaiaectsit
      421 lgmehiaavv hqddqlglav lrptdrlspp avaefqtgvp rlnadiavag fpyggvlttp
      481 altfgrladi rglngedevk rlsifaqpgd vggpvfdngg avlgmllpkv qtngqslppe
      541 vsfsvdadqi itsltdagla vqttdslaym tpevltlmaa dmavlvscwe d
//
LOCUS       WP_235259324             193 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6151 family protein [Octadecabacter algicola].
ACCESSION   WP_235259324
VERSION     WP_235259324.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040011.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19648.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..193
                     /product="DUF6151 family protein"
                     /calculated_mol_wt=21472
     Region          1..177
                     /region_name="DUF6151"
                     /note="Family of unknown function (DUF6151); cl41935"
                     /db_xref="CDD:477871"
ORIGIN      
        1 mskdvpfncs cgavsgilrd irprsgghlr cycadckqaa vwsgdvtptp dgihyyqttp
       61 dridfiagla dlrvfkwkeg rllrwyapcc gspmfntlds pqwafasint erfndpdalg
      121 paiayafkpm pdgksktkgy grfiigftrr tiwarisgaw rntpffeatg etitpikqlt
      181 eqdrsgvrqp kpv
//
LOCUS       WP_235259369             532 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein [Octadecabacter algicola].
ACCESSION   WP_235259369
VERSION     WP_235259369.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 532)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..532
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /calculated_mol_wt=56721
     Region          17..524
                     /region_name="PRK07524"
                     /note="5-guanidino-2-oxopentanoate decarboxylase"
                     /db_xref="CDD:236041"
ORIGIN      
        1 mtkslerplg aqishmlkdr gvdtifgipg vhnqemyrgi eeagithvla rheqgagfma
       61 dgyaratggf gvcyvitgpg lcnimtplgq aysdsvsvlt lasclddvtg rkgqlhqmkd
      121 qegaaatvcd wsetaqdakt ayrlidrala dfsfgdprpk tinvpiaale gmaephgapl
      181 rgetgqppap envrfaaeql rkakkplfvf gggaknlavd citplldrvn patfctfagr
      241 givpldyllh ygpgltrpds arviaeadlv lvvgsqlaev diwrehlght akmirvdtnq
      301 ealttfadas yniradaasf vnallaelge gsqpsdwsaa dvaktrakwr tevdaefpni
      361 lpimdslrda mpddamiysd mtqfayaake cwdmaypghw hhpsgfgtlg yslpasigga
      421 varkgkptvc iigdygiqyt iaelgtavel glplaillwd ngklgaieds miaaqiapns
      481 viqrnpdfla laraygaeav epktlgelap alaaaftakg ptiirmtpal cq
//
LOCUS       WP_235259386             897 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein [Octadecabacter algicola].
ACCESSION   WP_235259386
VERSION     WP_235259386.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..897
                     /product="helicase-related protein"
                     /calculated_mol_wt=99235
     Region          6..>119
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(14..20,94)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          160..281
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            261
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350171"
ORIGIN      
        1 mtnrgritav lgptntgkth yaiermlahr tgviglplrl larevydriv airgpsvval
       61 vtgeerivpp raaywvctve ampedmgadf vaideiqlca dldrghvftd rllrmrglqe
      121 tlfmgaetmw gaiasmvpea eflkrdrfst ltysgskkis rmqprsaivg fsvencyaia
      181 ellrrqkgga avvmgalspr trnaqvemyq ngdvdylvat daigmglnld idhvafsslt
      241 kfdgrrmrhl mpnelaqiag ragrhmnngt fgvtgeaptl dedvvdaisn nqfapvkklq
      301 wrnarlqfgs tarliqtlee rtddpwltrv resddlgalk alsadaevaa ratdgpsvrl
      361 lwdvcripdf rgishaehal llteiynflh esgrvpnewl agrvnridrt dgdidalskr
      421 layirtwtyv aqrngwvqde shwrdatrav edrlsdalhe rltarfvdrr tsvllrrlnq
      481 keglvadvnd kgevtvegqf vgkiegfrfr qdknasaeea ktiraasiqa lapqfhlrad
      541 rfynapdtei dfteqgglmw gaeavgklts gddplkprve afvddeagad vaekvqrrlq
      601 hfidrkiasa fepmikmqad etltglakgf afrmaegfgv lprgdvaedv kaldqdarga
      661 lrkhgvrfgq ftifmplllk paptrlrlvl wslskglqdf peapppglvt vptisglepg
      721 tyamsgyraa gerairidml erladmlrdq ntragfeata dmlsitgmtl eqfanlmegl
      781 gykaekgere kvkavvdapa ddvpanpipe getaavaeed apemevfyti swapkrqqrp
      841 qgdkpqrrgp pkgkggkkgg kpqrdkaqnf sarppkkeka idpdnpfaaa laglkkd
//
LOCUS       WP_235259520             406 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Octadecabacter
            algicola].
ACCESSION   WP_235259520
VERSION     WP_235259520.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 406)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..406
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=45054
     Region          4..390
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(11,13..14,16,35..37,101..103,147..149,193,197,
                     220..223)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(124,149,193,197)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mtkmkniivv ggdgfcgwpt alhlsgqghn itivdnmsrr eidakmgads ltpiasmedr
       61 llawkektgl tikfekidva refdrirelm aavkpdtiih fgeqraapys mkgvsekryt
      121 vdnnisgthn llaasvelgl dahfvhlgtm gvygydddgi eipegylpvy ipgddkkifq
      181 rhilyptnpg svyhmtksmd qllfqfyakn dqmritdlhq givwgtqtne trlderlinr
      241 fdydgdygtv lnrflmqavv ghpltvhgtg gqtrafihiq dtvkclalav anppvrdgkv
      301 aimnqmteth tvrelaklvs etsgakianv dnprneaaen dlrvsnktfi slglkpvtla
      361 eglmdetqhi aakyagrcir kmipcvstwt dnqrpgvidp ensraa
//
LOCUS       WP_235259671             342 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Octadecabacter algicola].
ACCESSION   WP_235259671
VERSION     WP_235259671.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 342)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 342)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..342
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=37965
     Region          30..266
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(87,89,91..92,191..192,210,256)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 mstdkihypw peppatgeai evatgvlwmr lplpmaldhv nvyalddgdg wtvidtgfds
       61 gktraiwetl lagplagkpv trvigthhhp dhiglagwfq esgaelampr tawlmarmlt
      121 ldeqpayptr siefyqragm dedilakrrn drpfnfadcv hpmplgftrl qeggtidigg
      181 rtwdirmgng hapehatfws rddnlviggd qllpsispni gvyptepdad plaewleace
      241 rlapfarddh lvlgghklpf tglpkrmqql ienhhsaldr lvdhistpqr agdcfkplfk
      301 raigeseygl alvealahln hlhqtgqatr tlrdgthwfq at
//
LOCUS       WP_235259677             266 aa            linear   BCT 02-MAR-2025
DEFINITION  protein-disulfide reductase DsbD domain-containing protein
            [Octadecabacter algicola].
ACCESSION   WP_235259677
VERSION     WP_235259677.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 266)
  AUTHORS   Bushweller,J.H.
  TITLE     Protein Disulfide Exchange by the Intramembrane Enzymes DsbB, DsbD,
            and CcdA
  JOURNAL   J Mol Biol 432 (18), 5091-5103 (2020)
   PUBMED   32305461
REFERENCE   2  (residues 1 to 266)
  AUTHORS   Smith,R.P., Whitten,A.E., Paxman,J.J., Kahler,C.M., Scanlon,M.J.
            and Heras,B.
  TITLE     Production, biophysical characterization and initial
            crystallization studies of the N- and C-terminal domains of DsbD,
            an essential enzyme in Neisseria meningitidis
  JOURNAL   Acta Crystallogr F Struct Biol Commun 74 (Pt 1), 31-38 (2018)
   PUBMED   29372905
REFERENCE   3  (residues 1 to 266)
  AUTHORS   Goulding,C.W., Sawaya,M.R., Parseghian,A., Lim,V., Eisenberg,D. and
            Missiakas,D.
  TITLE     Thiol-disulfide exchange in an immunoglobulin-like fold: structure
            of the N-terminal domain of DsbD
  JOURNAL   Biochemistry 41 (22), 6920-6927 (2002)
   PUBMED   12033924
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022853.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11412.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..266
                     /product="protein-disulfide reductase DsbD
                     domain-containing protein"
                     /calculated_mol_wt=28076
     Region          4..>265
                     /region_name="COG4233"
                     /note="Thiol-disulfide interchange protein, contains DsbC
                     and DsbD domains [Posttranslational modification, protein
                     turnover, chaperones, Energy production and conversion]"
                     /db_xref="CDD:443377"
ORIGIN      
        1 mierisvsli alcvaapvwa gpadgvvele vlpgwrtdng thmaglqlql adgwktywra
       61 pgdggipprf gwqgsqnltg aafhwpvpev fdqngmrsig ysqsvvipve lsvtddtapa
      121 lmrgqvqigv cdeicvpvll efdtalpadg ardpaiiaal ldrpqtsvea gvgdvtcaid
      181 pvenglrvta rvdmppmagd eavvieagdq qvwvsqpqtw rdgdalfars dmihvngggf
      241 alnrsevrit viagnqsvdi lgcgan
//
LOCUS       WP_235259767             476 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Fusobacterium
            mortiferum].
ACCESSION   WP_235259767
VERSION     WP_235259767.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 476)
  AUTHORS   Kreikemeyer,B., Beckert,S., Braun-Kiewnick,A. and Podbielski,A.
  TITLE     Group A streptococcal RofA-type global regulators exhibit a
            strain-specific genomic presence and regulation pattern
  JOURNAL   Microbiology (Reading) 148 (Pt 5), 1501-1511 (2002)
   PUBMED   11988525
REFERENCE   2  (residues 1 to 476)
  AUTHORS   McIver,K.S. and Myles,R.L.
  TITLE     Two DNA-binding domains of Mga are required for virulence gene
            activation in the group A streptococcus
  JOURNAL   Mol Microbiol 43 (6), 1591-1601 (2002)
   PUBMED   11952907
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016901.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05043.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..476
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=55959
     Region          16..>212
                     /region_name="BglG"
                     /note="Transcriptional antiterminator [Transcription];
                     COG3711"
                     /db_xref="CDD:442925"
ORIGIN      
        1 mkkiilksld vdvinfilhn nrasidelcn cfevsqvnir svlakieefs nknnlgtllk
       61 engeyyfenn kinldfkknd fllndlekke ritfivlkli vegsinltsi skeikvsrit
      121 lnsdmevike lisdfglklt siqwrgvffk gdfynlqnfs ilfisklyie nyfssplkkl
      181 inplvsdcfr kflnyetekk llnltnkiyq hfdiklgfyh yfilcgiliy thlgskknie
      241 fftkntvksf nltetlidil daedkalinn nislileyls lclnkkysin lpintdavvk
      301 kiystfnldd nnlnnqllsf linniylenr ffipnyinfa kkdeyileee isikimailn
      361 kyqipftkkd iaflyfylin iltetqkkni liidqstmtw kgnrlkgmlq nseqvravqv
      421 isyfnfktfp teiynkydif ifidlpdekk enyskqccfi nsyeliknsl nisklf
//
LOCUS       WP_235259825             545 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding protein [Fusobacterium mortiferum].
ACCESSION   WP_235259825
VERSION     WP_235259825.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 545)
  AUTHORS   Mittl,P.R. and Schulz,G.E.
  TITLE     Structure of glutathione reductase from Escherichia coli at 1.86 A
            resolution: comparison with the enzyme from human erythrocytes
  JOURNAL   Protein Sci 3 (5), 799-809 (1994)
   PUBMED   8061609
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013086.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00890.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..545
                     /product="FAD-binding protein"
                     /calculated_mol_wt=62127
     Region          7..536
                     /region_name="NadB"
                     /note="Aspartate oxidase [Coenzyme transport and
                     metabolism]; COG0029"
                     /db_xref="CDD:439800"
ORIGIN      
        1 mkikikkefk teilvvgtgi agliateral kkrkrvclvt nkklcggasy fplkgtlgiq
       61 vtkdkddcer yyedivkmgn gmenpelikt yisniknsly llnkigfepw lrkdsrpacf
      121 akysrdiyli nnwkkakerc krklknhrgl nilenstlvr ivtkdkrvvg aifqckqnfi
      181 fvkskviila tggvasnykd slypegingi ghiaaldaga iaqnmefiqf ipaflkpkyn
      241 vlfgehtlky clgmydlrnn lllsgvddek nkelwierss yapfsvdfks hiidlkipte
      301 gvsikyskel yenkeefytv yldwikndmg idllkdniii shfahscngg lkidefartg
      361 vnglyaigev asiieganrl ggnslggslv fanraiinav eyikntksfk lkkrdveqdf
      421 nawireitre dknnlsdkks vikilknits dnlgivrsae kvkrlfeelk nmresysiek
      481 nlkegslevy lmeesikmla lsilnreesr gahyredfpe tsnevvklnv krknnefiie
      541 kvkvk
//
LOCUS       WP_235259904             111 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Octadecabacter algicola].
ACCESSION   WP_235259904
VERSION     WP_235259904.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 111)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07883.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..111
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=11925
     Region          22..101
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 mafatfidsf psldvpipqt tvttkaiasd aglvvfftfh edfelpphsh kgqwgtvvmg
       61 qieltmdgts kvygpgesyd ipsgmvhsvk vksgtqaidv feegdryglk d
//
LOCUS       WP_235259976             525 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5928 domain-containing protein [Octadecabacter algicola].
ACCESSION   WP_235259976
VERSION     WP_235259976.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039920.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19350.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..525
                     /product="DUF5928 domain-containing protein"
                     /calculated_mol_wt=61090
     Region          32..241
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; cl27418"
                     /db_xref="CDD:452742"
     Region          270..525
                     /region_name="DUF5928"
                     /note="Family of unknown function (DUF5928); pfam19350"
                     /db_xref="CDD:437182"
ORIGIN      
        1 mariafillc hkdpeaivqq aeqltavgdy msihfdasap keafayiqeh lgdnpnvtfa
       61 kkrikcgwge wslvqatlya veaavdafpr athfymvsgd cmaiksasha kalldsddcd
      121 yiesfdffes dwiktgmkee rliyrhffne rthkslfyns wwaqrklgle reipadlqim
      181 igsqwwclrr rtiewiidmt knrpdvmkff rttwipdetf fqtlvrhlvp epeirtrtlt
      241 flmftdygmp vtfyndhydl llsqdflfar kispeatllk erlgrlyasd rddfsisgeg
      301 qklfsfltgr grigrrfapr fwetetslgr erellivack kwhvakrlvg sikhhtnips
      361 idylfneedt dlpdlggiqs tlskrtrhrr almrmlfdyy dtdrliicld tanldlmqdf
      421 fndrsttrll elecefsddy ltghakrvgl ageetaeetm qqllptiryd vvyesdrird
      481 agfenhlrvr evaspdenta piaeflslse dearaiaqtp ylfad
//
LOCUS       WP_235259999             156 aa            linear   BCT 02-MAR-2025
DEFINITION  Hsp20 family protein [Octadecabacter algicola].
ACCESSION   WP_235259999
VERSION     WP_235259999.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Maaroufi,H. and Tanguay,R.M.
  TITLE     Analysis and phylogeny of small heat shock proteins from marine
            viruses and their cyanobacteria host
  JOURNAL   PLoS One 8 (11), e81207 (2013)
   PUBMED   24265841
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 156)
  AUTHORS   Kim,K.K., Kim,R. and Kim,S.H.
  TITLE     Crystal structure of a small heat-shock protein
  JOURNAL   Nature 394 (6693), 595-599 (1998)
   PUBMED   9707123
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012241.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00011.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..156
                     /product="Hsp20 family protein"
                     /calculated_mol_wt=17444
     Region          1..139
                     /region_name="alpha-crystallin domain (ACD) found in
                     alpha-crystallin-type small heat shock proteins, and a
                     similar domain found in p23 (a cochaperone for Hsp90) and
                     in other p23-like proteins."
                     /note="The alpha-crystallin-Hsps_p23-like superfamily
                     includes the alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small heat shock proteins (sHsps)
                     and a similar domain found in p23-like proteins. sHsps are
                     small stress induced proteins with monomeric...; cl00175"
                     /db_xref="CDD:469641"
     Site            order(39..43,52,54,56..57,100,118..119)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:107227"
ORIGIN      
        1 mrtfdlaplh ratvgfdqit dmmdrilsnd qgsqsyppyn iektaddswr isiavagfse
       61 sdlhvevkqn alhvsakkae edtvertylh rgiatrafsr rfhladhvkv tgaahengml
      121 hidltrevpe alkprrieia tapkveqdvi egdkvn
//
LOCUS       WP_235260011             377 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding protein [Octadecabacter algicola].
ACCESSION   WP_235260011
VERSION     WP_235260011.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 377)
  AUTHORS   Mattevi,A., Fraaije,M.W., Mozzarelli,A., Olivi,L., Coda,A. and van
            Berkel,W.J.
  TITLE     Crystal structures and inhibitor binding in the octameric
            flavoenzyme vanillyl-alcohol oxidase: the shape of the active-site
            cavity controls substrate specificity
  JOURNAL   Structure 5 (7), 907-920 (1997)
   PUBMED   9261083
REFERENCE   2  (residues 1 to 377)
  AUTHORS   Benson,T.E., Walsh,C.T. and Hogle,J.M.
  TITLE     The structure of the substrate-free form of MurB, an essential
            enzyme for the synthesis of bacterial cell walls
  JOURNAL   Structure 4 (1), 47-54 (1996)
   PUBMED   8805513
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013714.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01565.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..377
                     /product="FAD-binding protein"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=38984
     Region          8..376
                     /region_name="glcE"
                     /note="glycolate oxidase FAD binding subunit; Provisional;
                     PRK11282"
                     /db_xref="CDD:236893"
ORIGIN      
        1 mtpktenela daissakgpl ritgggtrdi gnpvvgdals taalsgitly epgaltlvaq
       61 agtpvseiea aldaenqrla fepmdhrall gtqgtptigg mvaanvsgpr riavgacrdh
      121 llgvrfvdga gtviknggrv mknvtgydlv kllagsygtl gvlsevslkv lpkpeteatl
      181 vlndlsleds vaalsaalgs pfevtgaskv kgqtcirieg feasvryrae qltallsthg
      241 dvdqvdhnas stlwrgianv snfadheavt rvsvqpsaap algheiaskh nldvmldwgg
      301 glmwlgmtqg daaavahqai qdscaqinah atlikapiet raavpvfqpe nptitalsdg
      361 irakfdprgi lnpglmv
//
LOCUS       WP_235260039              72 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6500 family protein [Octadecabacter algicola].
ACCESSION   WP_235260039
VERSION     WP_235260039.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039799.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20110.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..72
                     /product="DUF6500 family protein"
                     /calculated_mol_wt=8225
     Region          16..68
                     /region_name="DUF6500"
                     /note="Family of unknown function (DUF6500); pfam20110"
                     /db_xref="CDD:437942"
ORIGIN      
        1 mrqslrdkav aicdakiakk genvglsfya ffanknddpe rlmeaaewwi kthkldhfek
       61 avkiremitd gk
//
LOCUS       WP_235260090             772 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein [Octadecabacter algicola].
ACCESSION   WP_235260090
VERSION     WP_235260090.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 772)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..772
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=82208
     Region          12..481
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     Site            order(162..166,174,189,191..192,238..241,244,247..248,
                     262..264,298,388,390,416,454)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143429"
     Site            order(166,262,295,298)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143429"
     Region          502..>740
                     /region_name="AdhE"
                     /note="Acyl-CoA reductase or other NAD-dependent aldehyde
                     dehydrogenase [Lipid transport and metabolism]; COG1012"
                     /db_xref="CDD:440636"
ORIGIN      
        1 mtvkdifdsm dygpaledas ealswladrg giaghfingq wgplrddfas tnpatgerla
       61 gvtngtadev tkavaaarka qpkwakdgka rarvlyaiar lmqknarlla vmetldngkp
      121 iresrdidvp lairhfyhha gfaqlmdeem pnaeplgvcg qiipwnfpll mlawkiapal
      181 amgntvvlkp aeytslsamv fceictaagv ppgvinivtg dgdtgaalva sdvdkiaftg
      241 stavgriire qtagsgktls lelggkspyi vfddadidsa veglvdaiwf nqgqvccags
      301 rllvqegisd rfyaklrarm dglrigdgld kcidmgaiad tvqldqikam vdantsgemh
      361 qckapegcfy pptlitglap adtlmqeeif gpvlvactfr tpaeaveian ntryglaasv
      421 wtenvnlald iapklvsgiv wvnatnlmda aagfggvres gfgreggweg llgytkprgk
      481 ssdvkapiaf tsddgtpadp ldrtaklyvg gkqarpdggy sqpvfnksgk llghasianr
      541 kdlrnaveam aaakgwsktt ghlraqilyy igenlsarad efadrinhlt gtkngakevs
      601 daidhlftwa awadkhdgaa kgvpirgval amnepvgnia vltddtrplm glieplapal
      661 amgnrvtava sqafplaatd fyqvldtsdv pagvvniltg dhtelaphma ahanidavws
      721 fstsdtseii eaksaqnlkr twvnngtars wpstiwraqs teiktiwipy ge
//
LOCUS       WP_235260167             229 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Octadecabacter
            algicola].
ACCESSION   WP_235260167
VERSION     WP_235260167.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 229)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 229)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 229)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..229
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=24596
     Region          5..223
                     /region_name="heterocyst_DevA"
                     /note="ABC exporter ATP-binding subunit, DevA family;
                     TIGR02982"
                     /db_xref="CDD:274374"
ORIGIN      
        1 mndavistrn ldhffgtgda rkqaifdinl eiargsltil mgpsgsgktt lltligclrd
       61 vkdgqvhvlg helngaseav lvglrrrlgf ifqahnlhes ltatqnvtmg lqvhghgdav
      121 kqrkaahhvl dllgladrrd ylpaslsggq kqrvavaral vsnpeiilad eptaaldkes
      181 ghtvvqmlks lgkargtttv mvthdprile madriitled grvisdelq
//
LOCUS       WP_235260175            1511 aa            linear   BCT 02-MAR-2025
DEFINITION  autotransporter domain-containing protein [Fusobacterium
            mortiferum].
ACCESSION   WP_235260175
VERSION     WP_235260175.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 1511)
  AUTHORS   Oomen,C.J., van Ulsen,P., van Gelder,P., Feijen,M., Tommassen,J.
            and Gros,P.
  TITLE     Structure of the translocator domain of a bacterial autotransporter
  JOURNAL   EMBO J 23 (6), 1257-1266 (2004)
   PUBMED   15014442
REFERENCE   2  (residues 1 to 1511)
  AUTHORS   Veiga,E., Sugawara,E., Nikaido,H., de Lorenzo,V. and Fernandez,L.A.
  TITLE     Export of autotransported proteins proceeds through an oligomeric
            ring shaped by C-terminal domains
  JOURNAL   EMBO J 21 (9), 2122-2131 (2002)
   PUBMED   11980709
REFERENCE   3  (residues 1 to 1511)
  AUTHORS   Henderson,I.R., Navarro-Garcia,F. and Nataro,J.P.
  TITLE     The great escape: structure and function of the autotransporter
            proteins
  JOURNAL   Trends Microbiol 6 (9), 370-378 (1998)
   PUBMED   9778731
REFERENCE   4  (residues 1 to 1511)
  AUTHORS   Pohlner,J., Halter,R., Beyreuther,K. and Meyer,T.F.
  TITLE     Gene structure and extracellular secretion of Neisseria gonorrhoeae
            IgA protease
  JOURNAL   Nature 325 (6103), 458-462 (1987)
   PUBMED   3027577
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015737.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03797.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1511
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..1511
                     /product="autotransporter domain-containing protein"
                     /calculated_mol_wt=166077
     Region          546..1285
                     /region_name="AidA"
                     /note="Autotransporter adhesin AidA [Cell
                     wall/membrane/envelope biogenesis, Intracellular
                     trafficking, secretion, and vesicular transport]; COG3468"
                     /db_xref="CDD:442691"
     Region          1105..1349
                     /region_name="Autotransporter"
                     /note="Autotransporter beta-domain; pfam03797"
                     /db_xref="CDD:461054"
     Region          1405..1508
                     /region_name="OmpA_C-like"
                     /note="Peptidoglycan binding domains similar to the
                     C-terminal domain of outer-membrane protein OmpA; cd07185"
                     /db_xref="CDD:143586"
     Site            order(1408..1409,1443..1444,1447,1451..1452,1455,1498,
                     1502)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:143586"
ORIGIN      
        1 mekelkrylk rkirislavv vsflitgsvs lssivssndi liendklilg klsekmseni
       61 piygenipid ergngileks linteinnsg iikgnldvky frdtslgnlf vtmgwgngiv
      121 lyapddlkld ldilvknsgm isgnfttkel gsdhfysgng ilkdyhmran anninkklnv
      181 yndgiilgny svnrvvaegl krfyvvfgsg ngngvmsvfe gsidkienng viggkiytpl
      241 fdysffdgng iavmnlkkvd nfgkitgesi lvnskenfde eycknyyiev kgaehgngiv
      301 trelynfnln nsgvisgksq aenvysdkli lnsifaplyd gtgngiffsd reerdrrgte
      361 tgipieissn gvisgnakyd altdeinrts hyygngngia ylaflttsst tnhnystems
      421 iknsgmikgy ykgdrifnth dingweikft esrfakhdgs ginymselie nrlditnsgl
      481 isgnsdkked ekntykgfgn gitlfptlsa ynsynywggy dikadfnien sgvvlgkdsa
      541 iyldranvnn sgienkdvtl diknygilag knlvyvnktq dtnkenknel tdeeikkyig
      601 qglgvklddn tnatevvvgt ggtitdegsl kgyeiknvlt qeeaskkefd ktllsstldk
      661 tdkliingvn kglevdkdle lsnsilnsyg valtvdsnsn ftgkgtiing gglrgdsedt
      721 tkkyiavegk ensalnfnek vlingdiaft etttdsnnsv vvsdsslngn lygsngniev
      781 einnnsilng nidlsnskes tlkikdniii ngdligskss dkdklifega tginifnkis
      841 dfsnielaqn sdvilyetae vtgtgeikit egnqlnlrvd gskkdesgki tghalndfng
      901 titgttslkp gdsieetgtp idkdkigvfn ivtnglgvds vidfsgtkfd eenvwvktes
      961 ildsaeidke netvvikgek dlysididtt vdeklyikln diykgvytsg dknfdrlkei
     1021 lylnpnltpe gnytavtdeq qmatllaylk qvytetpysf saeasrksmn vfgdivkenn
     1081 fkakdgeiit ygglthnnge gtdkyygkny hgfdigsadt kvdskmtgay gqiekgisds
     1141 tsvglmlggn nnkvdiatsd lkgnsaylgg yvkhdkgafr giagigiqys dwdshrntms
     1201 dsykenysdr glniyaegky tkelteglfl epkvgvsydy ikqesinesk dkalalevdg
     1261 kdfdtlsgnv gldlrkeivt ekgkhnltag vnytrilsga dednltgnfg gnsfdilvpq
     1321 ktkdnvsvgi kydieletgv mlgakvsydv pfkvsqdnht hknegswrvg vgigyrfntl
     1381 ndlnpmniis sskkdnsitl rtksyfefdk aelnnnskkv iekfseeinr dnlkgkikie
     1441 gytdnvgkss yneklslera tkvaeelkkq vknsdteyei lgkgasnpig nnetevgrak
     1501 nrrveiefqe k
//
LOCUS       WP_235260206             402 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Octadecabacter
            algicola].
ACCESSION   WP_235260206
VERSION     WP_235260206.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 402)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..402
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=44546
     Region          4..388
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(9,11..12,14,33..35,99..101,145..147,191,195,
                     218..221)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(122,147,191,195)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mskkiivlgg dgfcgwptsl ylsaqghdvh ivdnlsrrai deelgadslt piasmeerla
       61 aweetggspi gfhnfdvaqd yaalrnliee ikpdtviqfa eqraapysmk nengklytvn
      121 nnigathnll taiaelredi hvvhlgtmgv ygydgdglei pegylkvyvp gddrtifqrd
      181 ilyptnpgsv yhmtksmdql mfqfyakndn mritdlhqgi vwgtqteetr rhdallnrfd
      241 ydgdygtvln rflmqaavgh pltvhgtggq trafihiqdt vqclalaian ppargdkvki
      301 lnqmtethrv rdlaqmvada sgakvamvdn prneaaendl rvsnkgfidl glepmtlakg
      361 lltetmevsq kyadrcrmem ipcvstwtdn qkpgvlnkma ae
//
LOCUS       WP_235260215             551 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4214 domain-containing protein [Octadecabacter algicola].
ACCESSION   WP_235260215
VERSION     WP_235260215.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025314.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13946.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..551
                     /product="DUF4214 domain-containing protein"
                     /calculated_mol_wt=58593
     Region          4..>193
                     /region_name="COG2931"
                     /note="Ca2+-binding protein, RTX toxin-related [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:442175"
     Region          <216..264
                     /region_name="DUF4214"
                     /note="Domain of unknown function (DUF4214); pfam13946"
                     /db_xref="CDD:433598"
     Region          251..318
                     /region_name="DUF4214"
                     /note="Domain of unknown function (DUF4214); pfam13946"
                     /db_xref="CDD:433598"
     Region          308..387
                     /region_name="DUF4214"
                     /note="Domain of unknown function (DUF4214); pfam13946"
                     /db_xref="CDD:433598"
     Region          374..443
                     /region_name="DUF4214"
                     /note="Domain of unknown function (DUF4214); pfam13946"
                     /db_xref="CDD:433598"
ORIGIN      
        1 margvgssis iggnglkaas lggsglfvns tgsqllrgyi neidftqiii gqgspqfvdl
       61 ieidlptfsa gglytiqsqi dntvsaqlnl eylieqfsdl dwsfsgsded dsitvttlfs
      121 lsgddtfegl ggddiiqggd gadvisgdgg adilfgdngg dtitgdednd ilfggagndt
      181 itggegidfl yggddddllv sddlpvaffa etaasvyrly qatlgrepda nghqnwttrl
      241 eldgltllea angfvgslef qntygslgda gfvnllyqnv lgrdaddagl arwvgdletg
      301 vsraqvvlgf snskefktnt atdaaqfaqg ntqqiwaddv frlyqatldr apdvngmfnr
      361 terlgsgtey ldeaagfvns tefkntygan lsnadfvell yqnvldrsad daglarwvsd
      421 lengasrtev vrgfaqssef rdktadsled wmrenvegdv idggagndvi agghgsdlfi
      481 fqethagndr vlnleawdsi dvtdfqfadl ataqaaftqn ganvefvsgd vqatfentdi
      541 avfdddllil i
//
LOCUS       WP_235260231             286 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-binding protein [Octadecabacter algicola].
ACCESSION   WP_235260231
VERSION     WP_235260231.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13460.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..286
                     /product="NAD(P)H-binding protein"
                     /calculated_mol_wt=30754
     Region          3..272
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(7,9..10,12,33..35,70..72,101..103,115,119,138..141)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(79,103,115,119)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mtiaitavsg qlgseiartl iathpgetvi glartpakap dlgieirpgd ydqlaqlrqs
       61 lqgvdtlllv sgmdapevri kqhrnvinaa ktagvrkivy tsiqgveegt afstvvqsnr
      121 qteadvqasg lkyaigrngi yiepdveyid sykargeian sagtgkcgyt traelatayt
      181 slltsdkfns qtfklygvam sqtqltdyln safgtslkyr emtpdafiad rkaelgdfig
      241 piiggiyegi rqgiydgpsd fetvvgrahq swdeyfenla tsatdt
//
LOCUS       WP_235260251              96 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF134 domain-containing protein [Fusobacterium mortiferum].
ACCESSION   WP_235260251
VERSION     WP_235260251.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 96)
  AUTHORS   Brazda,V., Luo,Y., Bartas,M., Kaura,P., Porubiakova,O., Stastny,J.,
            Pecinka,P., Verga,D., Da Cunha,V., Takahashi,T.S., Forterre,P.,
            Myllykallio,H., Fojta,M. and Mergny,J.L.
  TITLE     G-Quadruplexes in the Archaea Domain
  JOURNAL   Biomolecules 10 (9), 1349 (2020)
   PUBMED   32967357
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014101.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02001.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..96
                     /product="DUF134 domain-containing protein"
                     /calculated_mol_wt=10964
     Region          1..90
                     /region_name="COG1342"
                     /note="Predicted DNA-binding protein, UPF0251 family
                     [General function prediction only]"
                     /db_xref="CDD:440953"
ORIGIN      
        1 mprckkqrcc rilenervfk pigipmvele sveieidele airlcdyegk sqietaelmq
       61 isrgtiqril nsgrkkilda llhqkaiklk ntgdek
//
LOCUS       WP_235260275             388 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease subunit S [Fusobacterium mortiferum].
ACCESSION   WP_235260275
VERSION     WP_235260275.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 388)
  AUTHORS   Janscak,P. and Bickle,T.A.
  TITLE     The DNA recognition subunit of the type IB restriction-modification
            enzyme EcoAI tolerates circular permutions of its polypeptide chain
  JOURNAL   J Mol Biol 284 (4), 937-948 (1998)
   PUBMED   9837717
REFERENCE   2  (residues 1 to 388)
  AUTHORS   Bickle,T.A. and Kruger,D.H.
  TITLE     Biology of DNA restriction
  JOURNAL   Microbiol Rev 57 (2), 434-450 (1993)
   PUBMED   8336674
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01420.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..388
                     /product="restriction endonuclease subunit S"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=45590
     Region          16..184
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
     Site            order(108,111..112,114..115,134,136,142,146,149..150,175,
                     177..178)
                     /site_type="other"
                     /note="TRD-CR/TRD-CR interface [polypeptide binding]"
                     /db_xref="CDD:341163"
     Region          194..366
                     /region_name="Methylase_S"
                     /note="Type I restriction modification DNA specificity
                     domain; pfam01420"
                     /db_xref="CDD:396139"
     Region          <288..382
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
     Site            order(295,298,306,308..309,330,332,338,342,345..346,367,
                     369..370)
                     /site_type="other"
                     /note="TRD-CR/TRD-CR interface [polypeptide binding]"
                     /db_xref="CDD:341170"
ORIGIN      
        1 mkskleelie klcpngveyr elekiitivs ppkkilskni tlqgkypvid qgadyisgyt
       61 ddteallpdn nyiifgdhte iikyvdfkfa qgadgikili tkdfdckyly ycftnfyept
      121 gkytrhwska kttliplppl eiqeeivril dkfteltiei keelttelil rkqqyehyrd
      181 elltfgdevk keslekctlk iqkvkwnnvs eeeynyidls svnrdnnkiy etqninstta
      241 psraqqivle ndiifgttrp llkryciipk eynnqicstg fcvlradeni vlpkwifyli
      301 stssfyayve knqkgtsypa isdtevkkfe iplppleeqk riveildrfd kyindikegl
      361 paeiemrqkq yehyrkelld fkklnmer
//
LOCUS       WP_235260291             422 aa            linear   BCT 02-MAR-2025
DEFINITION  radical SAM protein [Fusobacterium mortiferum].
ACCESSION   WP_235260291
VERSION     WP_235260291.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 422)
  AUTHORS   Benjdia,A., Leprince,J., Guillot,A., Vaudry,H., Rabot,S. and
            Berteau,O.
  TITLE     Anaerobic sulfatase-maturating enzymes: radical SAM enzymes able to
            catalyze in vitro sulfatase post-translational modification
  JOURNAL   J Am Chem Soc 129 (12), 3462-3463 (2007)
   PUBMED   17335281
REFERENCE   2  (residues 1 to 422)
  AUTHORS   Berteau,O., Guillot,A., Benjdia,A. and Rabot,S.
  TITLE     A new type of bacterial sulfatase reveals a novel maturation
            pathway in prokaryotes
  JOURNAL   J Biol Chem 281 (32), 22464-22470 (2006)
   PUBMED   16766528
REFERENCE   3  (residues 1 to 422)
  AUTHORS   Sofia,H.J., Chen,G., Hetzler,B.G., Reyes-Spindola,J.F. and
            Miller,N.E.
  TITLE     Radical SAM, a novel protein superfamily linking unresolved steps
            in familiar biosynthetic pathways with radical mechanisms:
            functional characterization using new analysis and information
            visualization methods
  JOURNAL   Nucleic Acids Res 29 (5), 1097-1106 (2001)
   PUBMED   11222759
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015983.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04055.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..422
                     /product="radical SAM protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0051539 - 4 iron, 4 sulfur cluster
                     binding [Evidence IEA]"
                     /calculated_mol_wt=48899
     Region          44..407
                     /region_name="HemN"
                     /note="Coproporphyrinogen-III oxidase HemN
                     (oxygen-independent) or related Fe-S oxidoreductase
                     [Coenzyme transport and metabolism]; COG0635"
                     /db_xref="CDD:440400"
ORIGIN      
        1 minnlllfdk rykshhdstg liskyvpsek adkssfeaml eikpddrkka iyvhtpycdk
       61 icsfcnlnrk qldgsldsya eyiasefdky gqttyfkest fdviffgggt ptvykpkqle
      121 iilqsiqrnv klgenyeftf ettlhnltee klevmmkygv nrlsvgiqtf sergrifynr
      181 tysknevier lkklknffng evcvdiiynf pnqtieevie darivkklel gsasfyslmv
      241 hegsklskdi eaekvimeed mkkdyllysh fvdemlrenk yhileltkia knggdtyqyi
      301 qvrnsggdtf pigvgaggsv qgigvfrmnk emsfyskqte yhakfaklsg imqfpiiske
      361 sikailneee ykyfcekmkn yeeeklviek ensfnftkdg vfwgnnlsid iigyildkvf
      421 nk
//
LOCUS       WP_235260378             140 aa            linear   BCT 02-MAR-2025
DEFINITION  D-Ala-D-Ala carboxypeptidase family metallohydrolase [Fusobacterium
            mortiferum].
ACCESSION   WP_235260378
VERSION     WP_235260378.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019896.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08291.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..140
                     /product="D-Ala-D-Ala carboxypeptidase family
                     metallohydrolase"
                     /calculated_mol_wt=16245
     Region          5..122
                     /region_name="Peptidase_M15_3"
                     /note="Peptidase M15; cl42048"
                     /db_xref="CDD:455393"
ORIGIN      
        1 mlnskyftek ettisatgkf lgikntpneq eknyiqytat rmdyirellg vplivtswfr
       61 ceelnkavdg sktsahrfgl avdvhsnmms skeiyekafq lkqegkiqfd qliyyprqnf
      121 vhfgfkldka qergmnwvnn
//
LOCUS       WP_235260295             416 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding domain-containing protein [Octadecabacter algicola].
ACCESSION   WP_235260295
VERSION     WP_235260295.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 416)
  AUTHORS   Mees,A., Klar,T., Gnau,P., Hennecke,U., Eker,A.P., Carell,T. and
            Essen,L.O.
  TITLE     Crystal structure of a photolyase bound to a CPD-like DNA lesion
            after in situ repair
  JOURNAL   Science 306 (5702), 1789-1793 (2004)
   PUBMED   15576622
REFERENCE   2  (residues 1 to 416)
  AUTHORS   Tamada,T., Kitadokoro,K., Higuchi,Y., Inaka,K., Yasui,A., de
            Ruiter,P.E., Eker,A.P. and Miki,K.
  TITLE     Crystal structure of DNA photolyase from Anacystis nidulans
  JOURNAL   Nat Struct Biol 4 (11), 887-891 (1997)
   PUBMED   9360600
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015406.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03441.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..416
                     /product="FAD-binding domain-containing protein"
                     /calculated_mol_wt=46391
     Region          <8..210
                     /region_name="PhrB"
                     /note="Deoxyribodipyrimidine photolyase [Replication,
                     recombination and repair]; COG0415"
                     /db_xref="CDD:440184"
ORIGIN      
        1 mtltedlfad lpdhpetvaf eptrqaglar lesfasrtgt hyasqrnfdl gpaqrstvsa
       61 lspwirhrli aeeevlrqtl arhspsaamk fiqevfwrgy fkgwmqqhps vwvsyqrglq
      121 saqnelarsv hrnvdyqsai egrtgiacfd hwclelkttg ylhnharmwf asiwiftlrl
      181 pwelgadffl thlidgdpas ntlswrwvgg lhtkgktyla rpsniarytq gafdpmgqla
      241 qsappliddq ehpfvplniv qpsvqgdall lvteedcqps fvcetpndvl glvlprepdi
      301 aekthafkqg avtdavtrls aqgsvvttyd wtsamiaaae qaattqilta fapvgpittk
      361 leslqrelam agmtlhqqlr pydaliwpha tkgffklkkm iptlltdlgv tdaktl
//
LOCUS       WP_235260452              97 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6506 family protein [Fusobacterium mortiferum].
ACCESSION   WP_235260452
VERSION     WP_235260452.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039801.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20116.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..97
                     /product="DUF6506 family protein"
                     /calculated_mol_wt=11006
     Region          3..96
                     /region_name="DUF6506"
                     /note="Family of unknown function (DUF6506); pfam20116"
                     /db_xref="CDD:437948"
ORIGIN      
        1 mkkkfamiim gneynpnehk akfettsqit yictinnwnm lketieylqk egvgaielcg
       61 afgkkraqei vemtnseiav vvhepeldll fskffgn
//
LOCUS       WP_235260492             134 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail tube protein [Fusobacterium mortiferum].
ACCESSION   WP_235260492
VERSION     WP_235260492.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 134)
  AUTHORS   Pell,L.G., Cumby,N., Clark,T.E., Tuite,A., Battaile,K.P.,
            Edwards,A.M., Chirgadze,N.Y., Davidson,A.R. and Maxwell,K.L.
  TITLE     A conserved spiral structure for highly diverged phage tail
            assembly chaperones
  JOURNAL   J Mol Biol 425 (14), 2436-2449 (2013)
   PUBMED   23542344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020949.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09393.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..134
                     /product="phage tail tube protein"
                     /calculated_mol_wt=14988
     Region          1..134
                     /region_name="DUF2001"
                     /note="Phage tail tube protein; pfam09393"
                     /db_xref="CDD:430580"
ORIGIN      
        1 masrrtaffn gnkgeiwcng vkigtaskgk vvkklnyeei paesgdgvir vptnhtievt
       61 vtfrstgeef didmfnlged vsiimsnsni ndttrrrikc dgltwdeqtl idfekhkvqe
      121 ielsgqaety eile
//
LOCUS       WP_235260564             273 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein
            [Fusobacterium mortiferum].
ACCESSION   WP_235260564
VERSION     WP_235260564.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 273)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..273
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=29206
     Region          32..270
                     /region_name="PBP2_AA_binding_like_2"
                     /note="Substrate-binding domain of putative amino
                     acid-binding protein; the type 2 periplasmic-binding
                     protein fold; cd13627"
                     /db_xref="CDD:270345"
     Site            200
                     /site_type="other"
                     /note="amino acid binding residues"
                     /db_xref="CDD:270345"
ORIGIN      
        1 mrnrlaklal aaltavalvg cggakesket ntfkigmeag yapynwtqlt danggvkisg
       61 sseyaggydi eiakriadgl gkelvvvkte wdglvpalvs gkvdaiiagm sptaerketi
      121 dftdtyyqsn lvmlvknggd yvnaktladf sgakitgqln tfhytvidqi lnvnkqpamd
      181 nfpamrvale sgvidgyvte rpeaisaqsa nsnfkmveft dgfvtspedt aiavglakns
      241 plkdkvneil rgisqeerle imdkviqnqp aaq
//
LOCUS       WP_235260688             257 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Octadecabacter algicola].
ACCESSION   WP_235260688
VERSION     WP_235260688.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 257)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..257
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=27362
     Region          23..252
                     /region_name="protocat_pcaD"
                     /note="3-oxoadipate enol-lactonase; TIGR02427"
                     /db_xref="CDD:131480"
ORIGIN      
        1 mtkthkinak gatlfatesg sgptlvfshc lgldhhvwdg vvdrlpnyrs vrydlrghgq
       61 sdapegpysm gtlisdaeav cdaldlrdvv fvglsvggmv aqglavkrld lvrgmvmias
      121 aakvgqpepw herakavrek giqavvdstm drwnagddsk elkewllqvn pegyaatcea
      181 lagtdfytpt sglrlptlgm cgngdkatpp dlvrettdlv pgsqfhlihg aghiatvthp
      241 ediaaklnef lsgighv
//
LOCUS       WP_235260722             476 aa            linear   BCT 02-MAR-2025
DEFINITION  amino acid permease [Fusobacterium mortiferum].
ACCESSION   WP_235260722
VERSION     WP_235260722.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..476
                     /product="amino acid permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=52334
     Region          3..429
                     /region_name="AA_permease_2"
                     /note="Amino acid permease; cl45918"
                     /db_xref="CDD:459263"
ORIGIN      
        1 mgtkklnwrt lammgftvvw gfgnvvnnya nqgltvvvsw lliltfyflp yalmvgemgs
       61 vfenkgggvs swigstygpm iaylagwtyw vvhipylaqk pqgalvalsw vffqngdmik
      121 nfnplilqsi vlaiflfflw lsakginslk kigalagtsm ffmgilyill tvaapsivga
      181 asattdwslt tfmpkfdfay fttismlvfa vggcekispy vkevdnpskn fpkgmiilaa
      241 svgvsallgs lamgimfnsg nipadlkmng qyyafkllge yyglgnllmi lyaiantlgq
      301 isalmfsida plkmligegd knfipqsftk tnqygaping ykltailvgi liiipalgig
      361 dmnnlynwll dlnsivmplr ylwvflayig lrgfirnkgl mekatfkfit sdkvatlvgv
      421 wcfvftafac lmgifpknve tfssewifqi tlniltpivl iglgfilpki arkqnr
//
LOCUS       WP_235260737             141 aa            linear   BCT 02-MAR-2025
DEFINITION  MarR family transcriptional regulator [Fusobacterium mortiferum].
ACCESSION   WP_235260737
VERSION     WP_235260737.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   Alekshun,M.N., Levy,S.B., Mealy,T.R., Seaton,B.A. and Head,J.F.
  TITLE     The crystal structure of MarR, a regulator of multiple antibiotic
            resistance, at 2.3 A resolution
  JOURNAL   Nat Struct Biol 8 (8), 710-714 (2001)
   PUBMED   11473263
REFERENCE   2  (residues 1 to 141)
  AUTHORS   Sulavik,M.C., Dazer,M. and Miller,P.F.
  TITLE     The Salmonella typhimurium mar locus: molecular and genetic
            analyses and assessment of its role in virulence
  JOURNAL   J Bacteriol 179 (6), 1857-1866 (1997)
   PUBMED   9068629
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013231.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01047.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..141
                     /product="MarR family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=16967
     Region          22..120
                     /region_name="HTH_ARSR"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; cl46857"
                     /db_xref="CDD:481197"
ORIGIN      
        1 mqefiyanek ytnilkekln ndlnltdyny iycigstdki nitqlskkik nskgytskvi
       61 kklislnyir tyqeegnkkd iyvelnkngk naykdifeki envenrfykf lwenfteeel
      121 kflynffvki nkfqneeisk l
//
LOCUS       WP_235260763             645 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase family protein [Fusobacterium mortiferum].
ACCESSION   WP_235260763
VERSION     WP_235260763.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04851.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..645
                     /product="DEAD/DEAH box helicase family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=75833
     Region          2..136
                     /region_name="PLDc_SF"
                     /note="Catalytic domain of phospholipase D superfamily
                     proteins; cl15239"
                     /db_xref="CDD:472788"
     Site            order(81,83,99,101,112)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197200"
     Site            81
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197200"
     Region          87..>514
                     /region_name="SSL2"
                     /note="Superfamily II DNA or RNA helicase [Transcription,
                     Replication, recombination, and repair]; COG1061"
                     /db_xref="CDD:440681"
ORIGIN      
        1 myeslkksiq esdeiimnvs firdsgmkll ikdlkeaker gkrikiltsd ymkvtepnal
       61 yrlleiggvk ifdnplnksf hpktyifrrk ddfeiyvgss nisysalisg vewnynfvsg
      121 qndevkeild eftelyerns feltlqwlre yekrykksey geifdnqekr sdeviepikf
      181 qipalyelsk treegykkam ivvgtglgkt ylavfdsmnf kkvlfiahrd eilrgarnsf
      241 esvyrdsrsy gyfnalekes kkdivfasis tlskseylrd ewfakdsfdy ivvdefhhss
      301 sksylkvlny fqpqfllglt atpdradngd iyklcdynia yecdfrvgin ngwlvpfeyy
      361 giyddtdysl ipwrsgkydl ealenalvie krvdlvfkky mehrkkstvg fcasvkhcev
      421 mnqyfrkqgv kseiiigetp ipkrqeiigk fkerevevif tvdifnegvd ipcidtllfl
      481 rptlsytifi qqlgrglrtf egkdsvrvld fvgnykgael rplfltgnyk kgkgvinttd
      541 kefllpegcs aefnfkliey fekfkrksir qeelvkldyk nlmetlervp tlmdtytfge
      601 ipvhmyiktf kcfpqyrdrv veifqtsdvr vgredekwfn iffek
//
LOCUS       WP_235260773             441 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Fusobacterium mortiferum].
ACCESSION   WP_235260773
VERSION     WP_235260773.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 441)
  AUTHORS   Mande,S.S., Sarfaty,S., Allen,M.D., Perham,R.N. and Hol,W.G.
  TITLE     Protein-protein interactions in the pyruvate dehydrogenase
            multienzyme complex: dihydrolipoamide dehydrogenase complexed with
            the binding domain of dihydrolipoamide acetyltransferase
  JOURNAL   Structure 4 (3), 277-286 (1996)
   PUBMED   8805537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07992.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..441
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=48660
     Region          5..37
                     /region_name="rubredoxin_like"
                     /note="Rubredoxin_like; nonheme iron binding domain
                     containing a [Fe(SCys)4] center. The family includes
                     rubredoxins, a small electron transfer protein, and a
                     slightly smaller modular rubredoxin domain present in
                     rubrerythrin and nigerythrin and detected either...;
                     cd00350"
                     /db_xref="CDD:238210"
     Site            order(8,11,24,27)
                     /site_type="other"
                     /note="iron binding site [ion binding]"
                     /db_xref="CDD:238210"
     Region          51..431
                     /region_name="NirB"
                     /note="NAD(P)H-nitrite reductase, large subunit [Energy
                     production and conversion]; COG1251"
                     /db_xref="CDD:440863"
ORIGIN      
        1 mlvkkwrctv cdelfdydkk patcpvcgvg qelfelveve vsensiakei dvviigggva
       61 avnvadsisa knklakitii skegylpyyr trlteildnd ipmermeikk qswydernik
      121 vmlneevtsi lngekavils ngeklkydsl viatgakcfv ppfenkdleg vrvirelket
      181 leikevakkc knvviigggv lgleaawgik nlganvtvle vmprvlprql dergssllek
      241 miktsgvnim tgveikgfag ngkvekvllk dgqelaaelv ivsagirpnl efavssgiki
      301 ergivvnerm etslkdvyac gdvaefngki iglwqvameq gkvvgtnicg eekiyaeqvq
      361 plsfegmntq llsigeikce adckeivedy natrdiykkf ffqndilkgv ilvgdisksv
      421 avikgvreei rknqiitkly n
//
LOCUS       WP_235260807             250 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein
            [Fusobacterium mortiferum].
ACCESSION   WP_235260807
VERSION     WP_235260807.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 250)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..250
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=28490
     Region          26..243
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mkiykkllgi iflllsfnsl aqekiykiat didfppfqyr nsrneligid ielleaiakn
       61 qnfkyeilel gfqgainaln ngevdaifsa mtitdkrkek ydfsnpyvkn gialavkeds
      121 ditsyedlkg ktvtirtgtv ghdfvskisd kynfylvhld ddlnlvedvv nnmsdacfed
      181 siyirdnisk gekiklviee klhlecgvmv lkgknqelle kinkglkele kngtyrkimd
      241 kylvgynesl
//
LOCUS       WP_235260813             247 aa            linear   BCT 02-MAR-2025
DEFINITION  WGR domain-containing protein [Fusobacterium mortiferum].
ACCESSION   WP_235260813
VERSION     WP_235260813.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017243.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05406.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..247
                     /product="WGR domain-containing protein"
                     /calculated_mol_wt=29173
     Region          2..68
                     /region_name="WGR_MMR_like"
                     /note="WGR domain of molybdate metabolism regulator and
                     related proteins; cd07996"
                     /db_xref="CDD:153425"
     Region          77..247
                     /region_name="YfeS"
                     /note="Uncharacterized conserved protein YfeS, contains
                     WGR domain [Function unknown]; COG4884"
                     /db_xref="CDD:443912"
ORIGIN      
        1 mkrafefvde ksqkfwwiet senkfvvnyg kidtigkyei kewdsveece kqaaklinsk
       61 irkgyeeiks fdfenhyyfd dmeydidflt shpnfrehft deqlycncgd eetpfgsdtg
      121 ndvlhiieek irknknfsfv dfpkylleke wgieyfepil vtdekvfaee lkikdkglsr
      181 eaiinesdev viatafaqik itgkidkelk ekallslkrm eliakncgyr eskinkqlys
      241 dlesfkn
//
LOCUS       WP_235260831             125 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail assembly chaperone [Fusobacterium mortiferum].
ACCESSION   WP_235260831
VERSION     WP_235260831.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 125)
  AUTHORS   Pell,L.G., Cumby,N., Clark,T.E., Tuite,A., Battaile,K.P.,
            Edwards,A.M., Chirgadze,N.Y., Davidson,A.R. and Maxwell,K.L.
  TITLE     A conserved spiral structure for highly diverged phage tail
            assembly chaperones
  JOURNAL   J Mol Biol 425 (14), 2436-2449 (2013)
   PUBMED   23542344
REFERENCE   2  (residues 1 to 125)
  AUTHORS   Tam,W., Pell,L.G., Bona,D., Tsai,A., Dai,X.X., Edwards,A.M.,
            Hendrix,R.W., Maxwell,K.L. and Davidson,A.R.
  TITLE     Tail tip proteins related to bacteriophage lambda gpL coordinate an
            iron-sulfur cluster
  JOURNAL   J Mol Biol 425 (14), 2450-2462 (2013)
   PUBMED   23542343
REFERENCE   3  (residues 1 to 125)
  AUTHORS   Pell,L.G., Kanelis,V., Donaldson,L.W., Howell,P.L. and
            Davidson,A.R.
  TITLE     The phage lambda major tail protein structure reveals a common
            evolution for long-tailed phages and the type VI bacterial
            secretion system
  JOURNAL   Proc Natl Acad Sci U S A 106 (11), 4160-4165 (2009)
   PUBMED   19251647
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020464.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08890.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..125
                     /product="phage tail assembly chaperone"
                     /calculated_mol_wt=14125
     Region          <66..111
                     /region_name="Phage_TAC_5"
                     /note="Phage XkdN-like tail assembly chaperone protein,
                     TAC; pfam08890"
                     /db_xref="CDD:462624"
ORIGIN      
        1 mdiktlidna ekikdkgnik rtsitvkikr feelgfkepi vvlekptstt ilaalekqsk
       61 yyqlsecmin pdlsnkdvqk afsvnnkeal lkkifteeel ddlimhvgkl nmtqnkavlv
      121 sdikn
//
LOCUS       WP_235260842             116 aa            linear   BCT 02-MAR-2025
DEFINITION  lipopolysaccharide assembly protein LapA domain-containing protein
            [Octadecabacter algicola].
ACCESSION   WP_235260842
VERSION     WP_235260842.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 116)
  AUTHORS   Klein,G., Kobylak,N., Lindner,B., Stupak,A. and Raina,S.
  TITLE     Assembly of lipopolysaccharide in Escherichia coli requires the
            essential LapB heat shock protein
  JOURNAL   J Biol Chem 289 (21), 14829-14853 (2014)
   PUBMED   24722986
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018058.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06305.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..116
                     /product="lipopolysaccharide assembly protein LapA
                     domain-containing protein"
                     /GO_component="GO:0005886 - plasma membrane [Evidence
                     IEA]"
                     /calculated_mol_wt=12961
     Region          1..103
                     /region_name="LapA_dom"
                     /note="Lipopolysaccharide assembly protein A domain;
                     cl01539"
                     /db_xref="CDD:470244"
ORIGIN      
        1 mkyikytfwl ivavcliivg manrgivtlr ampealaapl gispdiempl fmaifigvgi
       61 glligflwew vrehrmrsha kskvrevdal kreidslkte khegkdeiva lldkas
//
LOCUS       WP_235261023             272 aa            linear   BCT 02-MAR-2025
DEFINITION  TIM barrel protein [Octadecabacter algicola].
ACCESSION   WP_235261023
VERSION     WP_235261023.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 272)
  AUTHORS   Fry,J., Wood,M. and Poole,P.S.
  TITLE     Investigation of myo-inositol catabolism in Rhizobium leguminosarum
            bv. viciae and its effect on nodulation competitiveness
  JOURNAL   Mol Plant Microbe Interact 14 (8), 1016-1025 (2001)
   PUBMED   11497462
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013429.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01261.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..272
                     /product="TIM barrel protein"
                     /calculated_mol_wt=29498
     Region          1..268
                     /region_name="Hyi"
                     /note="Hydroxypyruvate/dehydroerythronate isomerase,
                     Hyi/OtnI family [Carbohydrate transport and metabolism];
                     cl46782"
                     /db_xref="CDD:481122"
ORIGIN      
        1 mfpiglnhqt mphaatlatm daavemgcvg ielrndlatp lfdnnapevi rdaaasralr
       61 ilalaevygf ndndtqshdk vralidiakn cgaeaialip riqdspvprq vqrdqlrdtl
      121 tallplfens gitglieplg fpnaslrlka dvravldeih nptcfalihd tfhhalsget
      181 dvfaaetkiv hisgvsdphv kfddmtdemr glvddqdrlg niaqiaelra qgydgpysfe
      241 afsadvhale npvaniaest kfitaqiaer ea
//
LOCUS       WP_235261073             381 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Octadecabacter algicola].
ACCESSION   WP_235261073
VERSION     WP_235261073.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 381)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 381)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 381)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..381
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=40947
     Region          5..378
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(92,122,124,155,157,360..362,364,366)
                     /site_type="active"
                     /db_xref="CDD:173851"
ORIGIN      
        1 mdfalteeqt aifdmayqfg qehiapfaae wekqgtipke lwsevaalgl agcyvseefg
       61 gsglsrldat mvfealsmac psvasfisih nmcagmidkf gsegmksewl pklcsmekva
      121 sycltepgsg sdaaalrtka eksdggyvls gtkafisggg ysdvyltmvr tgengprgis
      181 avlvedgtdg lsfgaleekm gwraqptrqv qfdacavpaa nlvgeegrgf syamagldgg
      241 rlniaasalg gaqaaldaal nytgerkafg ktidqfqalq fklaemeikl qaarvflrqa
      301 awkldtsahd rvkhcamakt fvtdvafevt ndalqlhggy gyladygiek ilrdlrvhqi
      361 legtneimhl ivsrqmiedr g
//
LOCUS       WP_235261124             268 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease [Octadecabacter algicola].
ACCESSION   WP_235261124
VERSION     WP_235261124.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 268)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01061.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..268
                     /product="ABC transporter permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=28711
     Region          17..268
                     /region_name="ABC2_membrane"
                     /note="ABC-2 type transporter; cl21474"
                     /db_xref="CDD:473876"
ORIGIN      
        1 mhsnktdmgv rrfgavnwlg tytlirreil rfmnvwsqti mgplvnaglf lliftiaigp
       61 nrgdvmgvpf mqflapgilt mtviqnafan tssslasakv ggnivdtlmp plsalellig
      121 yiggavargm ivaaviaiga vwligmpihh pvwaltfvll gsvfmgglgm iagvfankfd
      181 qlsamtnfii tplaflsgtf ysiealppvl qtlshwnpff yiidgvrfgt lgvsdsspwl
      241 glgvvslcaa gvlglvwywl kigyrlka
//
LOCUS       WP_235261166             217 aa            linear   BCT 02-MAR-2025
DEFINITION  Hint domain-containing protein [Octadecabacter algicola].
ACCESSION   WP_235261166
VERSION     WP_235261166.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13403.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..217
                     /product="Hint domain-containing protein"
                     /calculated_mol_wt=23029
     Region          34..167
                     /region_name="Hint"
                     /note="Hedgehog/Intein domain, found in Hedgehog proteins
                     as well as proteins which contain inteins and undergo
                     protein splicing (e.g. DnaB, RIR1-2, GyrA and Pol). In
                     protein splicing an intervening polypeptide sequence - the
                     intein - is excised from a protein; cl22434"
                     /db_xref="CDD:451395"
ORIGIN      
        1 mfawktttwe kaarsnggts aalpkldtht tgmvsgtkva tntgwakvet iregqqvltf
       61 dgglqtiiav trhvlmadtn niaswpmavp agaignhegm sllphqsvmi esdaaedmtg
      121 dpfaiipvaa legyrgitqs rpsewieviq lhfaqdeiaf anigalflcy aqtdlisdaa
      181 qsdyavlpmd vaedlvdclm fedeahasvg aaqfasa
//
LOCUS       WP_235261168             733 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing
            protein [Octadecabacter algicola].
ACCESSION   WP_235261168
VERSION     WP_235261168.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 733)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02737.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..733
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..733
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /GO_function="GO:0070403 - NAD+ binding [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=78812
     Region          4..722
                     /region_name="fadJ"
                     /note="fatty acid oxidation complex subunit alpha FadJ;
                     PRK11154"
                     /db_xref="CDD:236864"
ORIGIN      
        1 mtdftmktda dgvatitwdt vgksmnvmnq qgfmdldali dqaladdavk gviitsgkeg
       61 sfaggmdlni iakmkesagd npaqglmegl mashailrki eragmdpktn kggkpiacam
      121 qgtglgigfe iplschrifv adnpkakigl peimvgifpg mggttrlvrk mgamaaspyl
      181 legklldpnk aksaglvdev vpadellsaa kawvlsepki vkpwdekgyk mpggepyhpa
      241 gfmtyvgasa mingktqgvy paakallsaa yegamvpfdt aikiearwft nvllnpssea
      301 mirslfinke alekganrpd vadqtvkkvg vlgagmmgag islvsalagi kvvlidrdqd
      361 aadkgksytt aymdkgisrk kateekkekv lslinattdl nalkdcdliv eavfedvgvk
      421 aemtkkveai igddaifatn tstlpitela kasvrpdqfi gihffspvdk mllveiirgk
      481 etgdvavaks ldfvrqirkt pivvnderff yanrcilpyv negvrmlqeg vapalienaa
      541 klvgmplgpl qltdetsidl gvkiakatka amgdayddsa delifwmade grlgrksnag
      601 fydynekgrr eglwsglger ykqadeqpel ievqhrllfs qvleavrale egvlmdireg
      661 dvgailgwgf apwsggpfsw ldilgapyaa drcdqmaekf gprfacptll remadkgqsf
      721 ygrfgtgvds kaa
//
LOCUS       WP_235261223             293 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Octadecabacter algicola].
ACCESSION   WP_235261223
VERSION     WP_235261223.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00528.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..293
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=32536
     Region          24..292
                     /region_name="TM_PBP2"
                     /note="Transmembrane subunit (TM) found in Periplasmic
                     Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
                     transporters which generally bind type 2 PBPs. These types
                     of transporters consist of a PBP, two TMs, and two
                     cytoplasmic ABC ATPase subunits, and...; cl00427"
                     /db_xref="CDD:444901"
     Site            order(86..87,90..91,96,106..109,111..120,123..124,126,
                     164..165,168,170,173..174,176,180..181,184,201,215..216,
                     219,226..229,232..233,248..249,260..261,264..265,267..268,
                     271..272,275..276)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:119394"
     Site            order(112..126,226..231)
                     /site_type="active"
                     /note="conserved gate region [active]"
                     /db_xref="CDD:119394"
     Site            order(126,159,232,246,249,260)
                     /site_type="active"
                     /note="putative PBP binding loops [active]"
                     /db_xref="CDD:119394"
     Site            order(185..197,203..204,208)
                     /site_type="active"
                     /note="ABC-ATPase subunit interface [active]"
                     /db_xref="CDD:119394"
ORIGIN      
        1 mkragfttrw lpillllpql viiavffywp aahavqssfy ledpfgfgss fvgfdnythl
       61 aqsseyaria kftllftilv tffslalalv lavkadnvir gaktyrtllm wvyavappva
      121 gfigllmlnq twgplaelak svgwdfklgv nfadtaaamv lvsvwkqvpv nfifflsglq
      181 sipksvreaa lidakssfrr fwdvtfplla ptgffllvin ityalfdtfg vvdvlvkgep
      241 gnnpmtlvyk vyvdgfrgnd iggssaqsvi lmvlvlalti fqfrlierri hyt
//
LOCUS       WP_235261214             499 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Octadecabacter
            algicola].
ACCESSION   WP_235261214
VERSION     WP_235261214.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
REFERENCE   1  (residues 1 to 499)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 499)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 499)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 499)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 499)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 499)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 499)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 499)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 499)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..499
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=54449
     Region          2..>384
                     /region_name="CHASE"
                     /note="Extracellular (periplasmic) sensor domain CHASE
                     (specificity unknown) [Signal transduction mechanisms];
                     COG3452"
                     /db_xref="CDD:442675"
     Region          <303..477
                     /region_name="PRK09894"
                     /note="diguanylate cyclase; Provisional"
                     /db_xref="CDD:182133"
ORIGIN      
        1 mptflsvlav iglgyfavqq aetisaqter dhvraklqtq aaqiegrlna migaasglva
       61 tlstepdmsq tryrslarri vssssgirni aaakdlivnl iypiegnefv lgldyrqnaa
      121 qraaafrard tgtftlagpv dlvqggqafi grfpvfsgds nqrqfwgils vvvdltsfye
      181 etgltalsse laivlvgkdg lqqesspffg speildaqpe sikinflngs wdmsaipidg
      241 wgstlsngwv kastilialt iacltglanf iglqrstiig klkqrelqle qshaeiekla
      301 lhdhltglpn rrflerrlce qrsrlhglmi ldldgfksvn dlfghkvgdc vlvavtqrlq
      361 kaigengilv rsggdefvll cegdapsgnn dqdtpssird clqslaerll eclkepingm
      421 spptrmgisi gircietnek wspsswlkqa dramyqskre grnrstfyde lgdvsevsva
      481 eqrslleamt npnqmqntg
//
LOCUS       WP_235261224             434 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Octadecabacter algicola].
ACCESSION   WP_235261224
VERSION     WP_235261224.1
KEYWORDS    RefSeq.
SOURCE      Octadecabacter algicola
  ORGANISM  Octadecabacter algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Octadecabacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Octadecabacter algicola"
                     /db_xref="taxon:2909342"
     Protein         1..434
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=47399
     Region          6..434
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mkniaissaa vlsmlastaf aeteitwwhg mggalgetvn eiaegfnasq ddytitpvfk
       61 gtyeetltag iaafrageqp nimqvfdaga atviaaegat ipvqdllean gvgfdiedyi
      121 sgvryfyadv dgkmigmpfn ssspvmyynm qaleaagvtp patweefetv tapalkdagy
      181 valsqshlpw ifvenfmsrn dlpfatnnng ydgaegteil vnvdplkahf tavtewqdag
      241 yfewfgtgwn dnqtpfenge vaiwlgssgs fgglsqldld fdfsttylpy weavttepkq
      301 tfiggaalfa msgqpdeena ataaffeylt spevqymwhr etgyvpvtee ayelakadgh
      361 ydrfpaaetg ilqlsldase ntrgyrmgfy vqirdvmnre fgriltgets vddafdiiea
      421 danglltrfa qtqn
//
LOCUS       WP_235863085             432 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Saccharopolyspora kobensis].
ACCESSION   WP_235863085
VERSION     WP_235863085.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora kobensis
  ORGANISM  Saccharopolyspora kobensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Saccharopolyspora kobensis"
                     /db_xref="taxon:146035"
     Protein         1..432
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44587
     Region          24..419
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(37..38,41..42,45,77,127..128,130..132,135,155,
                     158..159,162,239,242..243,246..248,251,279,283,341..342,
                     346,350,366,369..370,373..374,377)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340877"
ORIGIN      
        1 msvdrvheaa pgtaaavqrp vmawvitgml vlfvvvnwad ktvfgiaaqp lkeelgltsa
       61 qvgfigsaff flfsiagltv gfignrvrtk wvlftlaalw sltmvpvlvs asfatllisr
      121 iglgaaegps galaaagafe wfpkekrsfp sawlssgasi akiaiaplla livavwgwra
      181 sfvalavagv vwalawalig rqgpyaaplg rnesapivqr vpfrrialsr tflgcvvgtf
      241 tmyglvsvil twlpsyfevg lgidrlqagv mfglpsisgm tamlvvswfs dravaagssa
      301 rvqrglvpag glliggalla llpylvspvl aiiavvvgyg igtvalplat aavsqicppa
      361 qqsgtlgvfl alqsssglfa paltgwlvdv aptpsegfal afqvfglaaa vggiatallv
      421 nperdarrvl ga
//
LOCUS       WP_235863133             246 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-dependent oxidoreductase [Ureibacillus sinduriensis].
ACCESSION   WP_235863133
VERSION     WP_235863133.1
KEYWORDS    RefSeq.
SOURCE      Ureibacillus sinduriensis
  ORGANISM  Ureibacillus sinduriensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Ureibacillus.
REFERENCE   1  (residues 1 to 246)
  AUTHORS   Dengler,U., Niefind,K., Kiess,M. and Schomburg,D.
  TITLE     Crystal structure of a ternary complex of D-2-hydroxyisocaproate
            dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate
            at 1.9 A resolution
  JOURNAL   J Mol Biol 267 (3), 640-660 (1997)
   PUBMED   9126843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02826.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Ureibacillus sinduriensis"
                     /db_xref="taxon:561440"
     Protein         1..246
                     /product="NAD(P)-dependent oxidoreductase"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
                     /calculated_mol_wt=28060
     Region          <59..242
                     /region_name="DpaA"
                     /note="Dipicolinate synthase subunit A (sporulation
                     protein SpoVFA) [Cell cycle control, cell division,
                     chromosome partitioning, Amino acid transport and
                     metabolism]; COG5842"
                     /db_xref="CDD:444544"
ORIGIN      
        1 mkvlaknlsn ehrtvyyknl avwdeelnrt vlefhpdfvv lpihpllvev plvlglskav
       61 vfagklndew reilkeneih fyledegfiw hnavltaeaf lssfyntkra ilgkkfvitg
      121 fgrvakmvah tlrsmgaeic iavrsnvqln eakafryeav dlnevgeidg dffintipak
      181 wldeqfntki smpifdlasy pgclqeginr kqyellpalp gkffpedagn vlyesiveql
      241 rrrhtc
//
LOCUS       WP_235863142             246 aa            linear   BCT 02-MAR-2025
DEFINITION  glutamine amidotransferase [Saccharopolyspora kobensis].
ACCESSION   WP_235863142
VERSION     WP_235863142.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora kobensis
  ORGANISM  Saccharopolyspora kobensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 246)
  AUTHORS   Petrova,T., Cuff,M.E., Wu,R., Kim,Y., Holzle,D. and Joachimiak,A.
  TITLE     Novel hexamerization motif is discovered in a conserved cytoplasmic
            protein from Salmonella typhimurium
  JOURNAL   J Struct Funct Genomics 8 (1), 19-25 (2007)
   PUBMED   17968677
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07090.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Saccharopolyspora kobensis"
                     /db_xref="taxon:146035"
     Protein         1..246
                     /product="glutamine amidotransferase"
                     /calculated_mol_wt=26593
     Region          1..242
                     /region_name="GATase1_like"
                     /note="Putative glutamine amidotransferase; pfam07090"
                     /db_xref="CDD:399821"
ORIGIN      
        1 mllageswva rttdvkgfda idraqleiga eallaalrga ghdvvhlpsh lvatdfpasl
       61 delgeydvvi lsdigansll lhpqvfnqgr rfpnrlklla ewvrggggla maggylsfqg
      121 fqgkanfhdt pieevlpvei lpyddrvesp egvfgeltgt ehpvtagldq qwpvllgyqk
      181 ltakpdatvl atvdsrplla vrsegagrtl afasdisphw apaeflewdg yrrlfdqavt
      241 wlagdr
//
LOCUS       WP_235863193             589 aa            linear   BCT 02-MAR-2025
DEFINITION  collagen-like triple helix repeat-containing protein [Pseudomonas
            palleroniana].
ACCESSION   WP_235863193
VERSION     WP_235863193.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas palleroniana
  ORGANISM  Pseudomonas palleroniana
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 589)
  AUTHORS   McElroy,K., Mouton,L., Du Pasquier,L., Qi,W. and Ebert,D.
  TITLE     Characterisation of a large family of polymorphic collagen-like
            proteins in the endospore-forming bacterium Pasteuria ramosa
  JOURNAL   Res Microbiol 162 (7), 701-714 (2011)
   PUBMED   21726633
REFERENCE   2  (residues 1 to 589)
  AUTHORS   Whatmore,A.M.
  TITLE     Streptococcus pyogenes sclB encodes a putative hypervariable
            surface protein with a collagen-like repetitive structure
  JOURNAL   Microbiology (Reading) 147 (Pt 2), 419-429 (2001)
   PUBMED   11158359
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027314.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15984.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Pseudomonas palleroniana"
                     /db_xref="taxon:191390"
     Protein         1..589
                     /product="collagen-like triple helix repeat-containing
                     protein"
                     /calculated_mol_wt=51077
     Region          160..>570
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          195..380
                     /region_name="Collagen_mid"
                     /note="Bacterial collagen, middle region; pfam15984"
                     /db_xref="CDD:435053"
ORIGIN      
        1 mktqtqvvlw kastalalvm amslggcssg ggghhssvaa sspdagagsg sggtgggsgt
       61 gsgtggtggg tagtgggtdg tgggtagtgg gtdgtgggtd gtgggtagtg ggtdgtgggt
      121 ggigggtagt gggtggtggg tggtgggtgg tgstttplvt gqiagtlgtt vgnvgaavgd
      181 lgstlngvpv vgvtagglvt atgnavtsig sgvtnglgtl gtnsnalgtt vagigtgvan
      241 lgtgvsntgs tlgttlggvp vvggltggvg taagglvsnv gqavtmlgdt lstasttgpl
      301 gsatntlsrs alvpvvslve nttgnlgrat glgtplngll nqvgstvtgv ggqvagagga
      361 gnpvttaagg alasvggvln qsggyvapag gaaapglpel vggvvanvgs gltagstngt
      421 vgtagvtgga lgntvaslgt viggtgvant apttpvagla tnvgtalapv tngvtsltqn
      481 vgtttgigap vnglvtqvgg avsslgtnlt tananpvtna vgttvtslgn tvgsvgglvt
      541 ggtgstgggl lgglnvgast ttntsvngsa ttgttgglgg llngvtgth
//
LOCUS       WP_235863209             322 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Ureibacillus sinduriensis].
ACCESSION   WP_235863209
VERSION     WP_235863209.1
KEYWORDS    RefSeq.
SOURCE      Ureibacillus sinduriensis
  ORGANISM  Ureibacillus sinduriensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Ureibacillus.
REFERENCE   1  (residues 1 to 322)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 322)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Ureibacillus sinduriensis"
                     /db_xref="taxon:561440"
     Protein         1..322
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=36560
     Region          4..232
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(65,67,69..70,165..166,184,231)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 mqrierlelt tnfpigpvys yivfgekitl vdaglkneqg wkdlnkglhr vgisisdieq
       61 ivlthhhndh tgmvdwilqe npsipiyahk dtetilkdes ylersceffe klfiefgltk
      121 emaiewayrk ghrdyfeiah vdgvlkegdl ipglssfqvi etpghsqdhi sfynaeeqvf
      181 lcgdniikgv hggifldapv ignerakpll qylnnlekcr elpakitysg hgpvidnlne
      241 aidghirnie nragrvintl kkangsatgf eiiqdmyrgr yeravitfvf eivsvldlll
      301 erkvvtaekq ngvniyrlvn eq
//
LOCUS       WP_235863396             207 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1643 domain-containing protein [Ureibacillus sinduriensis].
ACCESSION   WP_235863396
VERSION     WP_235863396.1
KEYWORDS    RefSeq.
SOURCE      Ureibacillus sinduriensis
  ORGANISM  Ureibacillus sinduriensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Ureibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019416.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07799.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Ureibacillus sinduriensis"
                     /db_xref="taxon:561440"
     Protein         1..207
                     /product="DUF1643 domain-containing protein"
                     /calculated_mol_wt=23776
     Region          33..177
                     /region_name="DUF1643"
                     /note="Protein of unknown function (DUF1643); cl01787"
                     /db_xref="CDD:470344"
ORIGIN      
        1 mkaiatfqli geevyrtnty iqfgtsrksl gavvmlnpgs adlqgearkk limngshtde
       61 ttidntmrql iqfmkeahtn ldgrlhiynl fyvrntngve sinlfehlka tgkyptialp
      121 slfemtqhpw lligwgvekr skwkyfekek rewlqliqds gipsfgilse nneyyhpcpr
      181 gpvkterlqq lieaynsnik plsikkl
//
LOCUS       WP_235863390             268 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Ureibacillus
            sinduriensis].
ACCESSION   WP_235863390
VERSION     WP_235863390.1
KEYWORDS    RefSeq.
SOURCE      Ureibacillus sinduriensis
  ORGANISM  Ureibacillus sinduriensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Ureibacillus.
REFERENCE   1  (residues 1 to 268)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Ureibacillus sinduriensis"
                     /db_xref="taxon:561440"
     Protein         1..268
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=30308
     Region          2..213
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(8,10..11,13,34..36,69..71,109..111,122,126,146..149)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(87,111,122,126)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mrsaivvggt glvgsnlvkl lceskeyvsv tviarkqptf ehpkltvklr sfdqieekdi
       61 efaheiyccl gttikkagsr eefekvdvqy plhiaslakk cgimhfilis amganeksrv
      121 yynrvkgkle kelidlelpq vsivrpsllv gernefrfge kigewvlkif nplligpmkk
      181 yrsieaaqla lamktialyg dkspvtiyns aqlsnmkmpe lpeeglapse eifnwgkfke
      241 eeltpideev vfnreklqel qvndetkq
//
LOCUS       WP_235863414             413 aa            linear   BCT 02-MAR-2025
DEFINITION  nitric oxide synthase oxygenase [Saccharopolyspora kobensis].
ACCESSION   WP_235863414
VERSION     WP_235863414.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora kobensis
  ORGANISM  Saccharopolyspora kobensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 413)
  AUTHORS   Crane,B.R., Arvai,A.S., Ghosh,D.K., Wu,C., Getzoff,E.D.,
            Stuehr,D.J. and Tainer,J.A.
  TITLE     Structure of nitric oxide synthase oxygenase dimer with pterin and
            substrate
  JOURNAL   Science 279 (5359), 2121-2126 (1998)
   PUBMED   9516116
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014897.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02898.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Saccharopolyspora kobensis"
                     /db_xref="taxon:146035"
     Protein         1..413
                     /product="nitric oxide synthase oxygenase"
                     /GO_function="GO:0004517 - nitric-oxide synthase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006809 - nitric oxide biosynthetic
                     process [Evidence IEA]"
                     /calculated_mol_wt=45873
     Region          45..347
                     /region_name="COG4362"
                     /note="Nitric oxide synthase, oxygenase domain [Inorganic
                     ion transport and metabolism]"
                     /db_xref="CDD:443495"
ORIGIN      
        1 mtvtrdevip iqqrppeqal dvvcevgesg dspsssalvr tdsttdvsaa eeflrafhda
       61 hpkagslaer ltevrrsiaa tgtyrhtgpe laygarvalr dsgwctsgvp wrrlkvrdlr
      121 glrhgsaias ecfehlrlat nagriqplvt vfapdspgnp gpriwneqvv ryagyamsgg
      181 gvlgdarysg ftaevqrmgw kppvqrgrfd hlplvvetah egiklvplpr dvvqevpleh
      241 pehpwfaelg lrwhtvplis nmqldiggir ypaapfntwf vgteigtrgl adenaygitr
      301 hvaerlgmdt stertlwrdr aiveinravl ysfdsarvti tdhhsealhr lawlrsgqrp
      361 gtsrpmfsvt reanrrarqg aprdfqspap rqprydelsr lnrrclgtdp pae
//
LOCUS       WP_235863416             423 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Saccharopolyspora kobensis].
ACCESSION   WP_235863416
VERSION     WP_235863416.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora kobensis
  ORGANISM  Saccharopolyspora kobensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Saccharopolyspora kobensis"
                     /db_xref="taxon:146035"
     Protein         1..423
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=42536
     Region          4..385
                     /region_name="efflux_EmrB"
                     /note="drug resistance transporter, EmrB/QacA subfamily;
                     TIGR00711"
                     /db_xref="CDD:129794"
ORIGIN      
        1 mlqfliavdv tvvnialpsi gaefgvdarg ltwvvvgyav tgggllmlgg rlsdvlgrrr
       61 mllvgtsvfg aasllagltq tfpllvvarl lqgagealal paamamivla fpegprrtra
      121 lsvwaavass glvlgfvlsg vitelfgwrw iflvavpfta yvvgaalvlv padppgerke
      181 ldlpgaallt aapllfvlgv vdapialiga vlaagafvvv erkaanplvp msffhnrtrv
      241 laniatalls aalstsfllf tfqlqqragl tpfeagvall plavalvaav tfvprvagrw
      301 gartcavigi astaagmiai aagaqlgaga vetipamvli aagmgfglvg lqqaavtgvt
      361 dddagvasgv qraadqlggs sgvtlyigig fapalvgvds favscalalv glaaaaliaw
      421 rid
//
LOCUS       WP_235863557             392 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Saccharopolyspora kobensis].
ACCESSION   WP_235863557
VERSION     WP_235863557.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora kobensis
  ORGANISM  Saccharopolyspora kobensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 392)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 392)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02771.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Saccharopolyspora kobensis"
                     /db_xref="taxon:146035"
     Protein         1..392
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=42060
     Region          15..383
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(91,121,123,142,144,368..371,373,375)
                     /site_type="active"
                     /db_xref="CDD:173848"
ORIGIN      
        1 meaqaplepq pevvaraaal rdqlashrde gerlrrlpda tvaaleaagl frawvprrfg
       61 gtelglrtmv dataeitkgd asagwlvmil gcgdwltglf pdkaqqevfg pdpdtkicqv
      121 ltpkaaarrv dggwrvsgrw apasgclhse wamlgmslpa dggaafalvp mrelrvedtw
      181 ftlgmrgtgs nmlvgedvfv pdhrvmhrsp atrgefptte ndspryrtal vptlatflia
      241 palglaehal ehvlaqagrk giaftsyahq ldstgfqlav aeaatkidva rlimhrsaat
      301 vdghalagth pdllertrlr qhsshalqqc reavdvlvna ygagamserd plhaivrdlq
      361 taarhalahp asnaeifgra llgvdpgite mi
//
LOCUS       WP_235863578             235 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2306 domain-containing protein [Saccharopolyspora kobensis].
ACCESSION   WP_235863578
VERSION     WP_235863578.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora kobensis
  ORGANISM  Saccharopolyspora kobensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021576.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10067.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Saccharopolyspora kobensis"
                     /db_xref="taxon:146035"
     Protein         1..235
                     /product="DUF2306 domain-containing protein"
                     /calculated_mol_wt=26151
     Region          64..223
                     /region_name="DUF2306"
                     /note="Predicted membrane protein (DUF2306); cl02232"
                     /db_xref="CDD:470499"
ORIGIN      
        1 mstvvqrpev erspvrwwrr pwvgplalva vmfvvyslpp ylaldpalsr vqvpggmevh
       61 ypllvghvlf gtvailsccf qvwpafrary prahrligra yvfagvlpaa vlavavavfa
      121 pfgpvavasn ltlaavwfgc taagwragra rrfgdhrkwm lrsfvltist mtnrvwsplw
      181 aillapqlpt tfggnmdyfi stiaglstwl gwvvpllvcq wwldrrprra rgatr
//
LOCUS       WP_235863619             383 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent monooxygenase [Saccharopolyspora kobensis].
ACCESSION   WP_235863619
VERSION     WP_235863619.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora kobensis
  ORGANISM  Saccharopolyspora kobensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 383)
  AUTHORS   Schreuder,H.A., van der Laan,J.M., Swarte,M.B., Kalk,K.H., Hol,W.G.
            and Drenth,J.
  TITLE     Crystal structure of the reduced form of p-hydroxybenzoate
            hydroxylase refined at 2.3 A resolution
  JOURNAL   Proteins 14 (2), 178-190 (1992)
   PUBMED   1409567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01494.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Saccharopolyspora kobensis"
                     /db_xref="taxon:146035"
     Protein         1..383
                     /product="FAD-dependent monooxygenase"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /calculated_mol_wt=40951
     Region          1..358
                     /region_name="PRK06753"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:168661"
ORIGIN      
        1 mrvlvigagv gglaiangll gqghevqvfe hadtlrtsga gitvwsngta alrelgidie
       61 psgrklhslr sltdsgrllw eadlgevter lgsptvqiar reliaemaaa lppevlhfgr
      121 rcvgvverpd svavefddgs eavgdlliga dgqrsvvrre llggdpakpt gwaswqgltr
      181 sdlpvahghq tlniagrnah cgliptgdgl lhwwfdmpwk egdpvlsvad lravfagwpd
      241 pveqllasvt dddlgffphi rhkvphvwgg prstllgdav hamppavaqa anqtledawl
      301 ltqylsgagd dlaprlraye qerrpralkv srtaaltsaq rstplqrlak fpgwlatrsq
      361 vaslrsgsnv lrgfaprpai qaa
//
LOCUS       WP_235863660             176 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Saccharopolyspora kobensis].
ACCESSION   WP_235863660
VERSION     WP_235863660.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora kobensis
  ORGANISM  Saccharopolyspora kobensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025052.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13671.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Saccharopolyspora kobensis"
                     /db_xref="taxon:146035"
     Protein         1..176
                     /product="AAA family ATPase"
                     /calculated_mol_wt=19313
     Region          6..155
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Site            order(11,16..19)
                     /site_type="active"
                     /db_xref="CDD:238977"
ORIGIN      
        1 mldraillit giqaagksti aqgiaerlpr svhlrgdtfr rmvvggreem sappseealr
       61 qlrlrhrlta qtadayfaeg favvaqdvvl gehlaelveq ihsrpllvvv lapdveaiad
      121 reagrgktay dtwaiaelna vlheqtprlg lwldtsgqtp eqtieeilrr wpeavv
//
LOCUS       WP_235260921             324 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase family 52 [Fusobacterium mortiferum].
ACCESSION   WP_235260921
VERSION     WP_235260921.1
KEYWORDS    RefSeq.
SOURCE      Fusobacterium mortiferum
  ORGANISM  Fusobacterium mortiferum
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Fusobacterium.
REFERENCE   1  (residues 1 to 324)
  AUTHORS   Coutinho,P.M., Deleury,E., Davies,G.J. and Henrissat,B.
  TITLE     An evolving hierarchical family classification for
            glycosyltransferases
  JOURNAL   J Mol Biol 328 (2), 307-317 (2003)
   PUBMED   12691742
REFERENCE   2  (residues 1 to 324)
  AUTHORS   Jones,P.A., Samuels,N.M., Phillips,N.J., Munson,R.S. Jr.,
            Bozue,J.A., Arseneau,J.A., Nichols,W.A., Zaleski,A., Gibson,B.W.
            and Apicella,M.A.
  TITLE     Haemophilus influenzae type b strain A2 has multiple
            sialyltransferases involved in lipooligosaccharide sialylation
  JOURNAL   J Biol Chem 277 (17), 14598-14611 (2002)
   PUBMED   11842084
REFERENCE   3  (residues 1 to 324)
  AUTHORS   Bozue,J.A., Tullius,M.V., Wang,J., Gibson,B.W. and Munson,R.S. Jr.
  TITLE     Haemophilus ducreyi produces a novel sialyltransferase.
            Identification of the sialyltransferase gene and construction of
            mutants deficient in the production of the sialic acid-containing
            glycoform of the lipooligosaccharide
  JOURNAL   J Biol Chem 274 (7), 4106-4114 (1999)
   PUBMED   9933604
REFERENCE   4  (residues 1 to 324)
  AUTHORS   Gilbert,M., Watson,D.C., Cunningham,A.M., Jennings,M.P., Young,N.M.
            and Wakarchuk,W.W.
  TITLE     Cloning of the lipooligosaccharide alpha-2,3-sialyltransferase from
            the bacterial pathogens Neisseria meningitidis and Neisseria
            gonorrhoeae
  JOURNAL   J Biol Chem 271 (45), 28271-28276 (1996)
   PUBMED   8910446
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019535.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07922.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Fusobacterium mortiferum"
                     /db_xref="taxon:850"
     Protein         1..324
                     /product="glycosyltransferase family 52"
                     /calculated_mol_wt=38705
     Region          <131..294
                     /region_name="A-2_8-polyST"
                     /note="Alpha-2,8-polysialyltransferase (POLYST); cl40640"
                     /db_xref="CDD:454802"
ORIGIN      
        1 mllfllivdi dfsnnvfvff edfdekiieq lkkqsiilpk yipikskikn likkrrylyk
       61 irslkrklkl tgkiygynhg lmgeifnkee ivlledgtyn mkkpnkreyi kyllkkilfn
      121 nripflvnee nvkeiyltdi fnynledins rikfniinvq ekwilktqde klkinrifgi
      181 eknietllcm dtilftqpls edgyieeeek iqiykkilkk ynnekliikv hprektnysn
      241 yfsdcivlke kcpiellvln glnikkaitl fstavfsfek kvkidfygte vhpklltkfg
      301 smdyimkrnk fleensygkt nfnr
//
LOCUS       WP_235863721            1053 aa            linear   BCT 02-MAR-2025
DEFINITION  arabinosyltransferase domain-containing protein [Saccharopolyspora
            kobensis].
ACCESSION   WP_235863721
VERSION     WP_235863721.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora kobensis
  ORGANISM  Saccharopolyspora kobensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 1053)
  AUTHORS   Belanger,A.E., Besra,G.S., Ford,M.E., Mikusova,K., Belisle,J.T.,
            Brennan,P.J. and Inamine,J.M.
  TITLE     The embAB genes of Mycobacterium avium encode an arabinosyl
            transferase involved in cell wall arabinan biosynthesis that is the
            target for the antimycobacterial drug ethambutol
  JOURNAL   Proc Natl Acad Sci U S A 93 (21), 11919-11924 (1996)
   PUBMED   8876238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016484.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04602.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Saccharopolyspora kobensis"
                     /db_xref="taxon:146035"
     Protein         1..1053
                     /product="arabinosyltransferase domain-containing protein"
                     /GO_function="GO:0052636 - arabinosyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0071766 - Actinobacterium-type cell wall
                     biogenesis [Evidence IEA]"
                     /calculated_mol_wt=110761
     Region          51..190
                     /region_name="Arabino_trans_N"
                     /note="Arabinosyltransferase concanavalin like domain;
                     pfam17689"
                     /db_xref="CDD:435976"
     Region          288..670
                     /region_name="Arabinose_trans"
                     /note="Mycobacterial cell wall arabinan synthesis protein;
                     pfam04602"
                     /db_xref="CDD:377388"
     Region          723..>954
                     /region_name="Arabino_trans_C"
                     /note="EmbC C-terminal domain; pfam14896"
                     /db_xref="CDD:434294"
ORIGIN      
        1 madragaael drplpaptpr errfpgavgl lvgmlgvlva lavplapvit qqvtatwpka
       61 gqlpestlaf vvpyhpaegq vripcpvvra gqqraapttl vasrppgqpt egfavttand
      121 hvialiggre alrapitaac dvaidadstg srarigdrav elpgvrvrdi vafatdlepe
      181 qatglqvrvt tanwfenspt ttknllvttq ivlvllafat llahdrsrrk haismeiepp
      241 isieiadrrr vaarhsdgas dggaismeir rpisieiasr grspvlgrlv dvglfivlag
      301 wwvvgpttpd dsfaamtvrn glltgdigny yrwenaseap ftlvqhllep vaawsanpla
      361 lripsvvaaa ltwlvlsrgi lgavlpehsr lgsvrllaav sflawwlpfg lgvrpepfea
      421 lglaavlacv lqavrrdrva wlglaalaag lsvavnpmgi talapfavla pqlrrllsvp
      481 vvallggiaa vgvvvmfadq slfgvrkate lhahygpdvp wfqevlryqy llgfdlqgdi
      541 arrapvllta liagysglll lrgarrlpgm alahvpplcl llsvllmiat pskwthyfga
      601 lagvgaatlt agavlitfaa rhlardrvvl vagglctala alaaalafag knnwflhsqf
      661 gvpwgeqpvr plnnpawwll avaaalavsv lsgrtgrarr llvripalvg vgavgvtvai
      721 vlgsfvlapi rqadaysigg qglaalsggs cgiadhvvat pdvpggapas ngpaesygfs
      781 agtghaqefa ppegvnefwg slgggqistg elttgwyslp alapdqelav avagrsgdgn
      841 rvalefaspt gvlgehvldd twldaderpa ypadhvvpdr pqdhpawrdl pvpardipag
      901 atavriravd gttdpagwla vagprvrnvv plpeylrgea pvlvdwsmtw napclqdvpr
      961 vagglveppa hlvippsgtg fggsaayvrd iggvfagvre vghqkevptr plgvektpey
     1021 sewghlievh ypmpgneydv qrvpvprwgw rge
//
LOCUS       WP_235863715             223 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Saccharopolyspora kobensis].
ACCESSION   WP_235863715
VERSION     WP_235863715.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora kobensis
  ORGANISM  Saccharopolyspora kobensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 223)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 223)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Saccharopolyspora kobensis"
                     /db_xref="taxon:146035"
     Protein         1..223
                     /product="VOC family protein"
                     /calculated_mol_wt=24440
     Region          6..125
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mtertipglm arsidpvadf ytalgfeitf rqtapyqflt vkrggielnf ygskefdpet
       61 sahgcvvetd dvdylyaaft eglqgafgsv pvqgvprvga lkdmsygvrq flmtdpggnt
      121 iqiaqpisen qrhwplpkgt fdraihmgal fadskqgvdl avkvldrarh rtdeeptatq
      181 llellvlrad vairrgesdl arellarvra tgaaepelad dlr
//
LOCUS       WP_235863783             395 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Saccharopolyspora kobensis].
ACCESSION   WP_235863783
VERSION     WP_235863783.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora kobensis
  ORGANISM  Saccharopolyspora kobensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Saccharopolyspora kobensis"
                     /db_xref="taxon:146035"
     Protein         1..395
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=39334
     Region          20..386
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(30..31,34..35,38,70,119..120,122..124,127,147,
                     150..151,154,227,230..231,234..236,239,267,271,321..322,
                     326,330,345,348..349,352..353,356)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mnadpvaktl tasplrtpvv lfmslaaalg tstlyplqpa iaevavslgs rvtavgfala
       61 cgpvgylvgl sflvplvdrc spgrvlaaqf gvlaaasals aavgnvwvlg svigvvgacs
      121 avgaglssva grlapphrra tvlgvvtagi sagilagriv ggwltdeigw rgmllafaaa
      181 cavvaaccpv vlpaarggse rgylavlrsl pglfvryavl riaavrgalw ffafcavwag
      241 iavalsappf sysaerigwy alaglagipa tqvagtwtdr vgarrvilag lalagvaaav
      301 agfaladtav tlvclaifda glfaaqvanq stvlsidpaa parfnsayml vyfvggslgt
      361 afgaaaaewl gwpttavita vvigvagait atvre
//
LOCUS       WP_235863823             391 aa            linear   BCT 02-MAR-2025
DEFINITION  neutral zinc metallopeptidase [Saccharopolyspora kobensis].
ACCESSION   WP_235863823
VERSION     WP_235863823.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora kobensis
  ORGANISM  Saccharopolyspora kobensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016143.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04228.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Saccharopolyspora kobensis"
                     /db_xref="taxon:146035"
     Protein         1..391
                     /product="neutral zinc metallopeptidase"
                     /calculated_mol_wt=41070
     Region          <46..234
                     /region_name="Zn_peptidase"
                     /note="Putative neutral zinc metallopeptidase; cl19825"
                     /db_xref="CDD:473215"
ORIGIN      
        1 mrawtpilmm illligscaa appepppvad htvdpafvhg tdhggadrla atvvtdvqny
       61 wheqypavfg tpwrnldggf fsvdtngngt appcsaevsd legnayycat vdaiawdrta
      121 llpvlqehyg dasvvvvlah eighavqkra gldadaapvr leamadcfag ayvrsvtdgr
      181 serlrindeq ldralraitl frdpvstnst dahgtaferv tafqdgyang prrctevtet
      241 plaalppdgp nlpldealrt esiseyfsgl vgeqwtppel aldrsalaet hadigdqavt
      301 tllaakfalt anaglgrptt gadaskqivc ltgaytaaqp gltqgdldea vavvldsddi
      361 grdaqgtnql tgfdriaafr tgalggatac g
//
LOCUS       WP_235863505             254 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleotide exchange factor GrpE [Saccharopolyspora kobensis].
ACCESSION   WP_235863505
VERSION     WP_235863505.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora kobensis
  ORGANISM  Saccharopolyspora kobensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 254)
  AUTHORS   Harrison,C.J., Hayer-Hartl,M., Di Liberto,M., Hartl,F. and
            Kuriyan,J.
  TITLE     Crystal structure of the nucleotide exchange factor GrpE bound to
            the ATPase domain of the molecular chaperone DnaK
  JOURNAL   Science 276 (5311), 431-435 (1997)
   PUBMED   9103205
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013212.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01025.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Saccharopolyspora kobensis"
                     /db_xref="taxon:146035"
     gene            1..254
                     /gene="grpE"
     Protein         1..254
                     /product="nucleotide exchange factor GrpE"
                     /GO_function="GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0042803 - protein homodimerization
                     activity [Evidence IEA]"
                     /GO_function="GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA]"
                     /GO_process="GO:0006457 - protein folding [Evidence IEA]"
                     /calculated_mol_wt=27554
     Region          29..234
                     /region_name="GrpE"
                     /note="nucleotide exchange factor GrpE; cl03075"
                     /db_xref="CDD:446000"
ORIGIN      
        1 miiirspdwp vtrattvsne ageamrdepe kdeqreeaav lapadapdae vsespapeta
       61 dplpaapeap aeelpgadpv aeltaavsal aeqirehhdr aaarervidk lhaeverlra
      121 geqnlllrpi ttdlqnlrkd llhqaralpp eptreqvadl lesfalsaeq alercgsapi
      181 rpeagaefsa rehravkilp aeapdqheri alvvsdgyld tttdrvtvpa rvhvyrwsap
      241 tgdsreqegm nadv
//
LOCUS       WP_235863853             146 aa            linear   BCT 02-MAR-2025
DEFINITION  LysM peptidoglycan-binding domain-containing protein
            [Saccharopolyspora kobensis].
ACCESSION   WP_235863853
VERSION     WP_235863853.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora kobensis
  ORGANISM  Saccharopolyspora kobensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 146)
  AUTHORS   Bateman,A. and Bycroft,M.
  TITLE     The structure of a LysM domain from E. coli membrane-bound lytic
            murein transglycosylase D (MltD)
  JOURNAL   J Mol Biol 299 (4), 1113-1119 (2000)
   PUBMED   10843862
REFERENCE   2  (residues 1 to 146)
  AUTHORS   Joris,B., Englebert,S., Chu,C.P., Kariyama,R., Daneo-Moore,L.,
            Shockman,G.D. and Ghuysen,J.M.
  TITLE     Modular design of the Enterococcus hirae muramidase-2 and
            Streptococcus faecalis autolysin
  JOURNAL   FEMS Microbiol Lett 70 (3), 257-264 (1992)
   PUBMED   1352512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01476.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Saccharopolyspora kobensis"
                     /db_xref="taxon:146035"
     Protein         1..146
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=15316
     Region          67..144
                     /region_name="PRK14125"
                     /note="cell division suppressor protein YneA; Provisional"
                     /db_xref="CDD:184523"
ORIGIN      
        1 mttfidaagr trqverrsaa rrrvddpaev arprdgerrl vgegaaqpaa vrvrtgrsge
       61 wlwltsvaif tflivmlvgl fgvrdapmag gtalvevlpg dtlwgiadrv apnsdpravv
      121 ariaelngpd aasapaghll lvpvsg
//
LOCUS       WP_235863942            1130 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Pseudomonas jessenii].
ACCESSION   WP_235863942
VERSION     WP_235863942.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas jessenii
  ORGANISM  Pseudomonas jessenii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 1130)
  AUTHORS   Clarke,T.A., Edwards,M.J., Gates,A.J., Hall,A., White,G.F.,
            Bradley,J., Reardon,C.L., Shi,L., Beliaev,A.S., Marshall,M.J.,
            Wang,Z., Watmough,N.J., Fredrickson,J.K., Zachara,J.M., Butt,J.N.
            and Richardson,D.J.
  TITLE     Structure of a bacterial cell surface decaheme electron conduit
  JOURNAL   Proc Natl Acad Sci U S A 108 (23), 9384-9389 (2011)
   PUBMED   21606337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037016.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17963.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1130
                     /organism="Pseudomonas jessenii"
                     /db_xref="taxon:77298"
     Protein         1..1130
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=122439
     Region          <35..>219
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     Region          287..895
                     /region_name="SufI"
                     /note="Multicopper oxidase with three cupredoxin domains
                     (includes cell division protein FtsP and spore coat
                     protein CotA) [Cell cycle control, cell division,
                     chromosome partitioning, Inorganic ion transport and
                     metabolism, Cell wall/membrane/envelope biogenesis;
                     COG2132"
                     /db_xref="CDD:441735"
     Region          488..701
                     /region_name="CuRO_2_BOD"
                     /note="The second cupredoxin domain of Bilirubin oxidase
                     (BOD); cd13866"
                     /db_xref="CDD:259934"
     Site            order(493..496,500,522,525..528,532,541,543,545,589..591,
                     624,626,695,697..698)
                     /site_type="other"
                     /note="Domain 1 interface [polypeptide binding]"
                     /db_xref="CDD:259934"
     Site            order(550,552,585..586,588..592,595..597,599,620,622..627)
                     /site_type="other"
                     /note="Domain 3 interface [polypeptide binding]"
                     /db_xref="CDD:259934"
     Region          934..1018
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
ORIGIN      
        1 mkiiassfns frflrvsgag cvllitfsls pvnaaplddv spppptdpsa ytnpptdfka
       61 aldalkampp anqgsialpn gvfgtrttpt tdnvlppalq tsfkiptngk psplfgaqpy
      121 tqqlllfeef gtekldptlp pptltfpvpi vgpaptqdpn niarsgpsaa aleafmrqpg
      181 lypfpaqysn vldrnpwkaq ieaflnrhpv gspaegrppg kgwshqrwne fypqvafktt
      241 qagaklnggm rdrrqlhnya vgefgpggly nqtsdtpvit gttkgidtrf hpnmpiqnhk
      301 alwtfdgtfp pkllmvrygq pvlmrhynal pidpsanmgf glhtlstheh nghspaesdg
      361 fsnafffpgq yydyrwpiql agydtintsa qdpraafpca pgetlfvnda tpglktcnng
      421 sikirgdwhe tmsthwfhdh mldftaqnvy kgnavmmnyy saldrgneaf vdgvnlrlps
      481 gsalpwgnrd ydvnllladk awdangqlwf npfntdgflg dqllvnwqyq prlkvrarsy
      541 rfrilngsvs ryfkialvre ivgtggefpg ptgsglsytr vpfhliandg nlmehavpfd
      601 gsmdldadgd lqdhnailpt mgiaerydii vnfakngist gdklyfvnlm ehhdgkgpes
      661 lppsladvls grykavlklg skglewdagd pvvgkflqll vqpyagqdvs mnpadyepak
      721 pgkamgktml pltlnrddlt vqaklklarh refifgrsdg tdeapwtikt dgglgfqmdp
      781 rvisaapqla ngptaagfsg dgtlevwrir nggngwnhpv hvhfeegivl nrdgkappew
      841 ekwarkdiyr igegidssqd vemairfref agtymehchn tqhedtsmll rwdvehpgqf
      901 qlmptplpgw dgvnyvnsaa lptfrtgdtr vedaanqkpi anpdsaisnt gqpviinvla
      961 ndsdpdgnvp lkvvgleqpd sgkgvvstdg lrvtytppat vpapftatft ykaadakgae
     1021 sapatvsvav saainesliv tsatvtarsn srwywvlsgt tsrgtgntit atattttgtv
     1081 nlgaavltpt atgarwniav ttagsgpsps ptatiksafg ktvtvpikan
//
LOCUS       WP_235863973             343 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Sutcliffiella halmapala].
ACCESSION   WP_235863973
VERSION     WP_235863973.1
KEYWORDS    RefSeq.
SOURCE      Sutcliffiella halmapala
  ORGANISM  Sutcliffiella halmapala
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Sutcliffiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Sutcliffiella halmapala"
                     /db_xref="taxon:79882"
     Protein         1..343
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=38452
     Region          29..342
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mvissilflm vylfyemnrg essedkqqvv nvftarhyqi dneifreftk qtgiqvnevk
       61 gtaeelverm kregkgssad lfiavdggal nfakqsgvlq pitseiflrn vpeewrdpdn
      121 ywagiatrsr vivyakdrvn pdqlstyedl tselwkgkvl vrsasslynq sllasfiely
      181 geseaekwae giarnlsrdp eggdraqaka iaakvgdvai mntyyigqms aspdpeerei
      241 venlgvlfpn qqttgahmni sgiglakhtp nkdnalklae fltssegqtm ltqgsyefpv
      301 ngeanmpeml knwknfkqqp vdiaslgrfh kqtkeiferv gwk
//
LOCUS       WP_235863984            1517 aa            linear   BCT 02-MAR-2025
DEFINITION  cell wall-binding repeat-containing protein [Sutcliffiella
            halmapala].
ACCESSION   WP_235863984
VERSION     WP_235863984.1
KEYWORDS    RefSeq.
SOURCE      Sutcliffiella halmapala
  ORGANISM  Sutcliffiella halmapala
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Sutcliffiella.
REFERENCE   1  (residues 1 to 1517)
  AUTHORS   Usenik,A., Renko,M., Mihelic,M., Lindic,N., Borisek,J., Perdih,A.,
            Pretnar,G., Muller,U. and Turk,D.
  TITLE     The CWB2 Cell Wall-Anchoring Module Is Revealed by the Crystal
            Structures of the Clostridium difficile Cell Wall Proteins Cwp8 and
            Cwp6
  JOURNAL   Structure 25 (3), 514-521 (2017)
   PUBMED   28132783
REFERENCE   2  (residues 1 to 1517)
  AUTHORS   Willing,S.E., Candela,T., Shaw,H.A., Seager,Z., Mesnage,S.,
            Fagan,R.P. and Fairweather,N.F.
  TITLE     Clostridium difficile surface proteins are anchored to the cell
            wall using CWB2 motifs that recognise the anionic polymer PSII
  JOURNAL   Mol Microbiol 96 (3), 596-608 (2015)
   PUBMED   25649385
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016047.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04122.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1517
                     /organism="Sutcliffiella halmapala"
                     /db_xref="taxon:79882"
     Protein         1..1517
                     /product="cell wall-binding repeat-containing protein"
                     /calculated_mol_wt=164917
     Region          183..652
                     /region_name="Peptidases_S8_C5a_Peptidase"
                     /note="Peptidase S8 family domain in Streptococcal C5a
                     peptidases; cd07475"
                     /db_xref="CDD:173801"
     Site            order(201,267,328..330,362,581)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:173801"
     Site            order(201,267,581)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173801"
     Region          425..548
                     /region_name="PA"
                     /note="Protease-associated (PA) domain. The PA domain is
                     an insert domain in a diverse fraction of proteases. The
                     significance of the PA domain to many of the proteins in
                     which it is inserted is undetermined. It may be a
                     protein-protein interaction domain. At...; cl28883"
                     /db_xref="CDD:333703"
     Site            490..492
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:238300"
     Region          667..792
                     /region_name="fn3_6"
                     /note="Fibronectin type-III domain; cl05663"
                     /db_xref="CDD:471288"
     Region          <1094..1150
                     /region_name="DPBB_RlpA_EXP_N-like"
                     /note="double-psi beta-barrel fold of RlpA, N-terminal
                     domain of expansins, and similar domains; cl41724"
                     /db_xref="CDD:455124"
     Region          <1211..1515
                     /region_name="LytB"
                     /note="Putative cell wall-binding domain (amidase
                     enhancer), LytB superfamily [Cell wall/membrane/envelope
                     biogenesis]; COG2247"
                     /db_xref="CDD:441848"
ORIGIN      
        1 mrnlrkfmfs ffafllvfsn lqfvvgatgn edaqssnvdq vrellkkere aqkfegleqa
       61 tfaanekvrv ivevsgetpl eyatkqkvly kelaektkks llkdtlnkqk svkdsisskg
      121 inikylnsft tafngfsgev afgdiekies lsevtrvyla neynrpevep dmetshqfiq
      181 stkawgdahl kgegmvvsvi dtgvdpdhqd fvisedtepy ltennvnsiv senslkgnff
      241 tekvpygyny ydqnnqildl gpgashhgmh vagtvaange ifgvapeaqv lgmkvfsndp
      301 nypstwsdvy laaiddsikl gadvlnmslg stasfydpas aedlaitrav engivcavsa
      361 gnsghfaygy snpffqnpdi gvvgapglnk dtiqvaasgn eaylyehais fgghdfsavg
      421 ygidswegle evelvslgkl ggpedyvgvd vegkvvvlpr gthtffdktk faaeagaagi
      481 ivynhdpsal ffnnqggwhi pfmkiqyaeg qaleqaiaag nntlkveele rfediefgrm
      541 tdftswgttp slelkpeita pggkiystlq nneyglmsgt smaaphvagg salvqqylln
      601 derfdelnae ertrlakvli mntakviedl ngqpfsprrq gagmmqifsa vdtpvyvvnk
      661 dngegkvelf dftnktlsft lvannltdee vvyevdtsvl tdtfkengdl pewnaeiagd
      721 fegakvtape tvavpangek eftitvdltn akipgfkadg setvkelven ifvegwvtls
      781 hdieadlvvp ylgfygnwdn paildglsvl dqdkfynvlp adavdsegyf etfftdenge
      841 nfyalnpdgd glydginlvp aflrnaremq fnvldeegkm lrrillqndv rksfynagrg
      901 tpysyndsrt wdgkvrselv kdgkywyeik avvdyanady qsikvpilvd ttapevsaty
      961 dtetgkvewt avdagigvee lyvfandqlv gifgaeetst vlanppakal ievyavdkvl
     1021 niggttvteg dttepllfig tstpepygay aslqvpvqgy atddvaidki tingqavpft
     1081 lntannryef qgsatfekdg kfdvivtavd tagnefsisr kvfidtthpt ittdvktfvd
     1141 hdvtevdatf tladnysyls fyidetheye lpfrspvdil epaseifkkk fklepglnnf
     1201 tlkledlagn tvteelsiyr neadsridrl agpgrystaa aisqagweqa dvvvlargdn
     1261 yadalagipl akkydaplll tntdslneyt kaeierlgtk kvvilgaeaa vnvsvenelk
     1321 dlglevqrla gasrystaaa iayelapnga nevvvvngqn fpdalsvaay aaskgmpill
     1381 teskdlpkat kaalqglgak kslvvggtsv itpdvvvelp npsrlngenr fdtsvkvanh
     1441 fhsgsnhyyv atgydfadal agaalaaknn tgillvgdqv psyvetfvka nvdlitvfgg
     1501 dnavsaevva glnnllk
//
LOCUS       WP_235864036             862 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein [Sutcliffiella halmapala].
ACCESSION   WP_235864036
VERSION     WP_235864036.1
KEYWORDS    RefSeq.
SOURCE      Sutcliffiella halmapala
  ORGANISM  Sutcliffiella halmapala
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Sutcliffiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Sutcliffiella halmapala"
                     /db_xref="taxon:79882"
     Protein         1..862
                     /product="helicase-related protein"
                     /calculated_mol_wt=100972
     Region          372..513
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(383..389,461)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350671"
     Region          518..643
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            630
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350171"
ORIGIN      
        1 mlnqlnilys ialdqtkyki qedidqylet keelptfley veergqyvqq iwlnvwlnkv
       61 tndiarkekk sflserglev egvdrklinr lfrnemrtyk pfdalawlkq vatedilpwe
      121 erykkarnll hkrmeekrvq aekeeiiskl eeithkiveq nqalyylhvr hfvakklved
      181 fkqrvkyeev dsfhleeili eagefqpeey siiaifftel tgavhktyhy geryfeyety
      241 yyayekritd ylfgvvpqmi ftqidsrlle qyeavieegl stsklrklla nafhliinny
      301 meeiqqeyvs dllklaeipf davlhqeife kdvsarelki aeelaeiqrk kdeeermldd
      361 ifgreyipsa grqiryvlhv getntgktfq alqrmqqaks glylaplrll alevydalna
      421 egipcslktg eeeklqadam hisstvemfh ekdfyevvvi deaqmiadkd rgfswykait
      481 kanarevhii gsfnmktmil qllgsaevev ieysreiplq vesriftlsd arkgdalvcf
      541 srkkvletas alqnrgysvs miygsmppet rkkqmqrfik gettviiatd aigmglnlpi
      601 rrivflqndk fdgtrrrrli sqevkqiagr agrkgiynvg kvaftndiav meklldkkde
      661 evhtfaiapt ssvlerfqky srrlgtffel wekfdnpegt qkatldeeqy lyetiqdsvi
      721 earlpaidly gflhlpfstk eqvlvsqwyd tmlaivegta lpepymrkgs ledaelsyks
      781 vglhllflyr ldrrteatyw eriresfsde aherlntdvk slskqcrncg kkldsdfnfn
      841 vcdtchytki rkkhknfnfr kp
//
LOCUS       WP_235864040             191 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Sutcliffiella halmapala].
ACCESSION   WP_235864040
VERSION     WP_235864040.1
KEYWORDS    RefSeq.
SOURCE      Sutcliffiella halmapala
  ORGANISM  Sutcliffiella halmapala
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Sutcliffiella.
REFERENCE   1  (residues 1 to 191)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 191)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Sutcliffiella halmapala"
                     /db_xref="taxon:79882"
     Protein         1..191
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=21866
     Region          <1..190
                     /region_name="ARO8"
                     /note="DNA-binding transcriptional regulator, MocR family,
                     contains an aminotransferase domain [Transcription, Amino
                     acid transport and metabolism]; COG1167"
                     /db_xref="CDD:440781"
ORIGIN      
        1 mlveddpfhd iyfdkappap mftydtagyv myirsyskyv apglrigvva srqplmkill
       61 tsksladngt pllnqkvflh yftsermqih leklrialqv rkevmeasls qyglewispn
      121 galnlwvklp ehidsvklls lcnkqsisfv pgpifdanne ldnwfrlsys fanekhireg
      181 idkfcaylre s
//
LOCUS       WP_235864062            1072 aa            linear   BCT 02-MAR-2025
DEFINITION  BTAD domain-containing putative transcriptional regulator
            [Sutcliffiella halmapala].
ACCESSION   WP_235864062
VERSION     WP_235864062.1
KEYWORDS    RefSeq.
SOURCE      Sutcliffiella halmapala
  ORGANISM  Sutcliffiella halmapala
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Sutcliffiella.
REFERENCE   1  (residues 1 to 1072)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015649.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03704.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Sutcliffiella halmapala"
                     /db_xref="taxon:79882"
     Protein         1..1072
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /calculated_mol_wt=124402
     Region          13..>484
                     /region_name="PRK04841"
                     /note="HTH-type transcriptional regulator MalT"
                     /db_xref="CDD:235315"
     Region          418..446
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(419,422..423,426..427,429,459,462..463,466..467,
                     469..470,500,503..504,507..508,511)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          451..487
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          477..>735
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          499..525
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(573..574,577..578,580,608,613..614,617..618,
                     622..623,652,655..656,659..660,663)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          573..601
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          606..646
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          651..679
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          926..1068
                     /region_name="BTAD"
                     /note="Bacterial transcriptional activator domain;
                     smart01043"
                     /db_xref="CDD:198111"
     Site            order(933,936..937,939,985,988..989,992..993,995..996,
                     1019,1022..1023,1026..1027,1030)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          933..956
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          961..1013
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1018..1044
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mmtssdtnti lqtkitppii kdyvlrraki arkmkavtny nvtivhsgpg ygkstiiasf
       61 iptfdtptyw ytatsfddel ipflryvvha irrvrgdfge kilsylermd ryirdeeiqd
      121 lcslfineis lidsphifvi ddfhliqsnq eivtwfhwll qhipvnlhvv litrecpnwd
      181 vltamkvkne llefteadlk fskeevevll qdiylvdvte eqvqriysls egwvmaigll
      241 sqrlseqpmt ndieasqgtl ddlfkylame vytkqtpmvq qfleqtsile imtgemcdev
      301 lgisgsnyil qslaerhifi svtgtnqyry halfkefler rlrtqesqyr llhkrcakwy
      361 mkqqeilaal shfekiedys aiaalihqyg sqlieqgqls yileklliin dpikekyyml
      421 wyiqgeiyry rcqyeeaena yklalqaaka sedklaairs lkgiakiyld tiqpikaerl
      481 lseaiqlmnt ikidkkeqnq lysimaenli nagqaskala wfdkveatyk esnlepriml
      541 rsgklqsakk lllsqkkaqa egilpqshre tdlllslvea lmgnaeqakk ladagikqgi
      601 klqapfveac gwirlghavq lmemydvtla kqcyetalti mdelnisrgk aeanmglcll
      661 yanqgayeka ilcgeealke teevkdnwls gliylsmkia aimnerwekv eyygiraykl
      721 lnkcgdeyga vllyfwqaiy ffekeewsmf sesmnrfltf iqtgnyeyil fnrttfgprd
      781 lqkftplllk aqksdiqrsy vtsllnelgf snaqnhpgyt lkiqtlgtfr vwlgqkeies
      841 kdwqrgkake lleffvtkrk kqlvkdeifa alwpniaekt vardfkvvln alnnalepdr
      901 karmepffvq rigstyglnq hsgymidcve fenlanigle ekeankaisl lmqalalykg
      961 dflpeqkyad wclnererls vyylrccekl aqllvarref dqaifyceki iekdptweea
     1021 yrllmfcyyq knnrsqaikw fakcknylen elgvepmstt kqmydlilgk an
//
LOCUS       WP_235864092             293 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Sutcliffiella halmapala].
ACCESSION   WP_235864092
VERSION     WP_235864092.1
KEYWORDS    RefSeq.
SOURCE      Sutcliffiella halmapala
  ORGANISM  Sutcliffiella halmapala
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Sutcliffiella.
REFERENCE   1  (residues 1 to 293)
  AUTHORS   Yeo,C.C. and Poh,C.L.
  TITLE     Characterization of IS1474, an insertion sequence of the IS21
            family isolated from Pseudomonas alcaligenes NCIB 9867
  JOURNAL   FEMS Microbiol Lett 149 (2), 257-263 (1997)
   PUBMED   9141667
REFERENCE   2  (residues 1 to 293)
  AUTHORS   Solinas,F., Marconi,A.M., Ruzzi,M. and Zennaro,E.
  TITLE     Characterization and sequence of a novel insertion sequence,
            IS1162, from Pseudomonas fluorescens
  JOURNAL   Gene 155 (1), 77-82 (1995)
   PUBMED   7698671
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01695.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Sutcliffiella halmapala"
                     /db_xref="taxon:79882"
     Protein         1..293
                     /product="ATP-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=33735
     Region          8..275
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            129..136
                     /site_type="other"
                     /note="Walker A motif"
                     /db_xref="CDD:99707"
     Site            order(130..137,193,228)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:99707"
     Site            189..194
                     /site_type="other"
                     /note="Walker B motif"
                     /db_xref="CDD:99707"
     Site            242
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:99707"
ORIGIN      
        1 mkealesvmk gmgmsnssnk lepvhcekcg neieriqiqh pfgkgtrwvp vacpcviker
       61 edfnkeqerr lkqhkiekal klssaledir nmtfsnyilr dgaensykei kkaienfeer
      121 grlgvfifge tgngkshlta aggnelivkg ysvifltekd llsrlaatkn frneesfhei
      181 mdaclradll vwddfmssqr ltdeekdwif qifngrerad kpiwatsnit peefqsdaia
      241 yklddkgrtw wriignmeci ynragnyrks kamaraigit veeyekqrks vee
//
LOCUS       WP_235864118             172 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Sutcliffiella halmapala].
ACCESSION   WP_235864118
VERSION     WP_235864118.1
KEYWORDS    RefSeq.
SOURCE      Sutcliffiella halmapala
  ORGANISM  Sutcliffiella halmapala
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Sutcliffiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024635.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13238.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Sutcliffiella halmapala"
                     /db_xref="taxon:79882"
     Protein         1..172
                     /product="AAA family ATPase"
                     /calculated_mol_wt=20023
     Region          1..128
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 mlngaygvgk tsvaerlvei ienamifdpe evgfmlrqli penvkldqek tdnfqdyilw
       61 ktltvqvaeq ikdtyqkhli vpmtvfnkey lqfirngfek idkdtfhfcl tatqdtihdr
      121 liergetegn wcfqqttkcl qafddemnev kidtekksve elvheilltl nq
//
LOCUS       WP_235864358             230 aa            linear   BCT 02-MAR-2025
DEFINITION  efflux RND transporter permease subunit, partial [Pseudorhizobium
            flavum].
ACCESSION   WP_235864358
VERSION     WP_235864358.1
KEYWORDS    RefSeq.
SOURCE      Pseudorhizobium flavum
  ORGANISM  Pseudorhizobium flavum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Pseudorhizobium.
REFERENCE   1  (residues 1 to 230)
  AUTHORS   Murakami,S., Nakashima,R., Yamashita,E. and Yamaguchi,A.
  TITLE     Crystal structure of bacterial multidrug efflux transporter AcrB
  JOURNAL   Nature 419 (6907), 587-593 (2002)
   PUBMED   12374972
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00873.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Pseudorhizobium flavum"
                     /db_xref="taxon:1335061"
     Protein         <1..>230
                     /product="efflux RND transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <1..>230
                     /region_name="ACR_tran"
                     /note="AcrB/AcrD/AcrF family; cl47191"
                     /db_xref="CDD:481531"
ORIGIN      
        1 qnaqvaagri garpnpinqq iaatvlvrgq ltspeefgai vlranpdgss vrlrdvarve
       61 igaesynfst kinglpaaai gvqlspsgna metatavrer maelaeffpa sleyqipydt
      121 spfvavsiek vihtlieami lvfvvmflfl qnirytiipt lvvpvallgt cavmyasgfs
      181 invltmfamv laigilvdda ivvvenveri maeeglppke atrkamgqis
//
LOCUS       WP_235864456             136 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family DNA-binding protein [Pseudomonas migulae].
ACCESSION   WP_235864456
VERSION     WP_235864456.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas migulae
  ORGANISM  Pseudomonas migulae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 136)
  AUTHORS   Changela,A., Chen,K., Xue,Y., Holschen,J., Outten,C.E.,
            O'Halloran,T.V. and Mondragon,A.
  TITLE     Molecular basis of metal-ion selectivity and zeptomolar sensitivity
            by CueR
  JOURNAL   Science 301 (5638), 1383-1387 (2003)
   PUBMED   12958362
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020839.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09278.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Pseudomonas migulae"
                     /db_xref="taxon:78543"
     Protein         1..136
                     /product="MerR family DNA-binding protein"
                     /calculated_mol_wt=15441
     Region          1..125
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(2..4,18,35..37)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133389"
ORIGIN      
        1 mnigeaasvs glsarmirhy erinlippsq rtrcgyrvyc ecdvhvlrfi hhardlglsi
       61 ervralltlw rernrsddev qaialsnida lnarittlqv mrealsyvae hcddaeqppg
      121 lvlderphdl perras
//
LOCUS       WP_235864532             700 aa            linear   BCT 02-MAR-2025
DEFINITION  5'-nucleotidase C-terminal domain-containing protein [Ureibacillus
            acetophenoni].
ACCESSION   WP_235864532
VERSION     WP_235864532.1
KEYWORDS    RefSeq.
SOURCE      Ureibacillus acetophenoni
  ORGANISM  Ureibacillus acetophenoni
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Ureibacillus.
REFERENCE   1  (residues 1 to 700)
  AUTHORS   Knofel,T. and Strater,N.
  TITLE     X-ray structure of the Escherichia coli periplasmic 5'-nucleotidase
            containing a dimetal catalytic site
  JOURNAL   Nat Struct Biol 6 (5), 448-453 (1999)
   PUBMED   10331872
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014871.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02872.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Ureibacillus acetophenoni"
                     /db_xref="taxon:614649"
     Protein         1..700
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /GO_process="GO:0009166 - nucleotide catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=75339
     Region          36..77
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          122..161
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          177..682
                     /region_name="UshA"
                     /note="2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or
                     3'-nucleotidase, 5'-nucleotidase family [Nucleotide
                     transport and metabolism, Defense mechanisms]; COG0737"
                     /db_xref="CDD:440500"
ORIGIN      
        1 mkkktmskvf natlatsvvv gsgllvtpaq aesisftdvk edsiyyqaii elakigaieg
       61 ssdstfkpgd sitrgqvtei lskvlnfqtv etsnepitra emasllanaf ylttsnteel
      121 pfkdvdsdda eaikslydng vttgtsntty spdgtvtreq aalfiyraln vspqtkaafe
      181 lkimhsndth srveqaakra qavkdvrakn pdallldagd mttgtlyynl fngqadleff
      241 nymkydavtf gnhefdagss dtglqtlvdy ikgadfpfvs snidftqdek ftglfsdlis
      301 sepengkiyn givkevngek vgifglttae tadisspgal tfenyleeae kavkafeglg
      361 vnkiivlshl gyddnpaidn dqelakring idvivgghsh tkldapvait tdengeakdt
      421 tlivqayqhs dflgtldvgf dengvvvdyn gklialgdya edpkaleilk pyqeevkafg
      481 dtelgvstev elsnprvsde gnteelsvrk netilgnlit dgmlakakqy tekevimalq
      541 ngggiraaid agpitvgevn tvlpfgntla imdvtgaelk aafehslgqy psenggflhv
      601 agakvefdst kpagervvsi ayldasgnyv eledsktytv atnaftakgg dgftmfgkay
      661 eegrvtdlgl sdwenlsehl qslealptet egrivdisve
//
LOCUS       WP_235864603              51 aa            linear   BCT 02-MAR-2025
DEFINITION  YpzG family protein [Ureibacillus acetophenoni].
ACCESSION   WP_235864603
VERSION     WP_235864603.1
KEYWORDS    RefSeq.
SOURCE      Ureibacillus acetophenoni
  ORGANISM  Ureibacillus acetophenoni
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Ureibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025504.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14139.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..51
                     /organism="Ureibacillus acetophenoni"
                     /db_xref="taxon:614649"
     Protein         1..51
                     /product="YpzG family protein"
                     /calculated_mol_wt=5774
     Region          2..49
                     /region_name="YpzG"
                     /note="YpzG-like protein; pfam14139"
                     /db_xref="CDD:404939"
ORIGIN      
        1 mlsgpghfnp rahergrnyq kprkqkslin grtevslsnq ilrsnakahh w
//
LOCUS       WP_235864607             381 aa            linear   BCT 02-MAR-2025
DEFINITION  MGDG synthase family glycosyltransferase [Ureibacillus
            acetophenoni].
ACCESSION   WP_235864607
VERSION     WP_235864607.1
KEYWORDS    RefSeq.
SOURCE      Ureibacillus acetophenoni
  ORGANISM  Ureibacillus acetophenoni
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Ureibacillus.
REFERENCE   1  (residues 1 to 381)
  AUTHORS   Awai,K., Marechal,E., Block,M.A., Brun,D., Masuda,T., Shimada,H.,
            Takamiya,K., Ohta,H. and Joyard,J.
  TITLE     Two types of MGDG synthase genes, found widely in both 16:3 and
            18:3 plants, differentially mediate galactolipid syntheses in
            photosynthetic and nonphotosynthetic tissues in Arabidopsis
            thaliana
  JOURNAL   Proc Natl Acad Sci U S A 98 (19), 10960-10965 (2001)
   PUBMED   11553816
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018613.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06925.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Ureibacillus acetophenoni"
                     /db_xref="taxon:614649"
     Protein         1..381
                     /product="MGDG synthase family glycosyltransferase"
                     /GO_function="GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009247 - glycolipid biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=42984
     Region          1..367
                     /region_name="PRK13609"
                     /note="diacylglycerol glucosyltransferase; Provisional"
                     /db_xref="CDD:237445"
ORIGIN      
        1 mtcnpkilil tgsygnghlk vtktlkdmfl kqgvsqdniv esdlfldshp iltkaskyly
       61 iksftygqki ygflyyggsk kkrilsydfl nkygmstlkn lveevkpdii vntfpmpvvp
      121 efrkktgaqi pivhvvtdyy ahknwiheev dryyvasktl kndlmklgfs sdrikvsgip
      181 idpifeveyd kkalfekyql dinrpvvlia agafgvlkdi demlskilsv nnnqvivvcg
      241 kneelknsls akfngnnnal ilgftnkmde lmkmatlmvt kpggitisea lavqvplily
      301 rpvpgqeken aiffeskgaa vqvtrsnkll dsilsllqde klrmnmkknm kelynahaae
      361 vicedvmylh aakekmnrii v
//
LOCUS       WP_235864639             256 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4198 domain-containing protein [Pseudomonas costantinii].
ACCESSION   WP_235864639
VERSION     WP_235864639.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas costantinii
  ORGANISM  Pseudomonas costantinii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022135.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10670.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Pseudomonas costantinii"
                     /db_xref="taxon:168469"
     Protein         1..256
                     /product="DUF4198 domain-containing protein"
                     /calculated_mol_wt=28310
     Region          12..228
                     /region_name="COG5266"
                     /note="Uncharacterized protein, contains GH25 family
                     domain [General function prediction only]"
                     /db_xref="CDD:444079"
ORIGIN      
        1 msnakallgy galmlattse ahqiwyealp gqplalyyge ydknvlevtp ggmdrfkqlk
       61 twsivdrsap lsltlqrqaf alaqqpsrdd sllardlhyp ifdlheagkt lkaywtpatr
      121 wvgdlrartp eltldivptg vadtnraqfq vfyaskplan qdvvletasg evfsqrsdaa
      181 gkvsfelpwq gtyvvavehq dyspgervnh egkaeaydvk rfsstlsfsr qqgqpplpra
      241 psqlpaseva rlkkqa
//
LOCUS       WP_235864684             324 aa            linear   BCT 02-MAR-2025
DEFINITION  LLM class flavin-dependent oxidoreductase [Pseudomonas
            costantinii].
ACCESSION   WP_235864684
VERSION     WP_235864684.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas costantinii
  ORGANISM  Pseudomonas costantinii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012517.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00296.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Pseudomonas costantinii"
                     /db_xref="taxon:168469"
     Protein         1..324
                     /product="LLM class flavin-dependent oxidoreductase"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /calculated_mol_wt=35567
     Region          3..226
                     /region_name="Flavin_utilizing_monoxygenases"
                     /note="Flavin-utilizing monoxygenases; cl19096"
                     /db_xref="CDD:450250"
ORIGIN      
        1 mplefswlmp lctpdwaarp gqwiqlaqav eyagldglwi pggvlcadsl gvaaalcaht
       61 rrlqlsvsvp pevmlpaala ttlqslqsis ghrvqlhlpn sersafgewl nrdqrserig
      121 eyleilqqll tpndtgldyq gryfqlehag varrelpapp lvlddsqsht lvaahaqtcl
      181 ltpghpqwla keiqrwrqiq pnldfactfg lilgdsedla wetaarllpv pdlpdeplat
      241 lprarhplrq wevhpnllql hpgqplilvg tpqqiatrlh elhglglshl ileggpsvse
      301 vlrfgeqvmp llfptstaqg apap
//
LOCUS       WP_235864745              93 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Salmonella
            enterica].
ACCESSION   WP_235864745
VERSION     WP_235864745.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 93)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 93)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 93)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 93)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         1..93
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=9883
     Region          <3..>83
                     /region_name="CydD"
                     /note="thiol reductant ABC exporter, CydD subunit;
                     TIGR02857"
                     /db_xref="CDD:274323"
ORIGIN      
        1 mvsqpidree lpiafaertl ieqlsftavp gdfmgiigts gsgksslika lsnsshcytg
       61 tvklnnvdit piseddiqnc layhsgnile kit
//
LOCUS       WP_235864720             151 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Salmonella enterica].
ACCESSION   WP_235864720
VERSION     WP_235864720.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 151)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         <1..151
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..151
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
ORIGIN      
        1 gevrnlasrs agaakeieal igesvrrvaq gaqlvqetga tmdailrgvt evttimkqia
       61 saseeqskgi sqvgvaitqm dsvtqqnaal veqvsaaaaa lerqtedlqr svqqfrlsas
      121 epqqrvtaka apgvqrmasa paqstdewvs f
//
LOCUS       WP_235864750             693 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxy terminal-processing peptidase [Pseudomonas costantinii].
ACCESSION   WP_235864750
VERSION     WP_235864750.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas costantinii
  ORGANISM  Pseudomonas costantinii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023246.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11818.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Pseudomonas costantinii"
                     /db_xref="taxon:168469"
     Protein         1..693
                     /product="carboxy terminal-processing peptidase"
                     /EC_number="3.4.21.102"
                     /calculated_mol_wt=77440
     Region          8..689
                     /region_name="PRK11186"
                     /note="carboxy terminal-processing peptidase"
                     /db_xref="CDD:236873"
ORIGIN      
        1 mkhlfpstal affiglgfas mstntfaans wdnlqpdrde viaslnvvel lkrhhyskpp
       61 lddarsviiy dsylklldps rsyflasdia efdkwktqfd dflksgdlqp gftiykryld
      121 rvkarldfal aelgkgvdkl dftqketllv drkdapwlts taalddlwrk rvkdevlrlk
      181 iagkepkaiq elltkryknq larldqtrae difqayintf amsydphtny lspdnaenfd
      241 inmslslegi gavlqsdndq vkivrlvpag padktkqvap adkiigvaqa dkemvdvvgw
      301 rldevvklir gpkgsvvrle viphtnapnd qtskivsitr eavkledqav qkqilnlkqd
      361 gkdyklgviv ipafyldfka fragdpdyks ttrdvkkilt elqkdkvdgv vidlrnnggg
      421 slqeatelts lfidkgptvl vrnadgrvdv ledenpgafy kgpmallvnr lsasaseifa
      481 gamqdyhral iiggqtfgkg tvqtiqplnh gelkltlakf yrvsgqstqh qgvlpdidfp
      541 siidtkeige salpeampwd tirpaikpas dpfkpfiaql kadhdarsak daefvfirdk
      601 lalakklmee ktvslneadr raqhssienq qlvlenarrk akgeeplkel kkededalpa
      661 eaektkpedd aylsetgril ldylkiskqv akq
//
LOCUS       WP_235864807             402 aa            linear   BCT 02-MAR-2025
DEFINITION  Eco57I restriction-modification methylase domain-containing protein
            [Pseudothauera lacus].
ACCESSION   WP_235864807
VERSION     WP_235864807.1
KEYWORDS    RefSeq.
SOURCE      Pseudothauera lacus
  ORGANISM  Pseudothauera lacus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Rhodocyclales; Zoogloeaceae; Pseudothauera.
REFERENCE   1  (residues 1 to 402)
  AUTHORS   Schluckebier,G., Kozak,M., Bleimling,N., Weinhold,E. and Saenger,W.
  TITLE     Differential binding of S-adenosylmethionine S-adenosylhomocysteine
            and Sinefungin to the adenine-specific DNA methyltransferase M.TaqI
  JOURNAL   J Mol Biol 265 (1), 56-67 (1997)
   PUBMED   8995524
REFERENCE   2  (residues 1 to 402)
  AUTHORS   Janulaitis,A., Vaisvila,R., Timinskas,A., Klimasauskas,S. and
            Butkus,V.
  TITLE     Cloning and sequence analysis of the genes coding for Eco57I type
            IV restriction-modification enzymes
  JOURNAL   Nucleic Acids Res 20 (22), 6051-6056 (1992)
   PUBMED   1334261
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019291.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07669.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Pseudothauera lacus"
                     /db_xref="taxon:2136175"
     Protein         1..402
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=44896
     Region          5..185
                     /region_name="HsdM"
                     /note="Type I restriction-modification system, DNA
                     methylase subunit [Defense mechanisms]; COG0286"
                     /db_xref="CDD:440055"
ORIGIN      
        1 mdvatfgqvf tpeavvgaml alrqragrvl epscgdgafl grlpgavgie ldaghcpaga
       61 lnidffaypd sekfdtiign ppyvrfqdil petrrrlasa hfdgrsnlyl ffiekclrhl
      121 apggelifit prdflkatsa vrlnrllyqq gsithaielg darvfdgalp ncliwrfekd
      181 cgerrmqvae lgsgddvaal ladppwqerh fveagghlmf argdyplhlg dvamvkvgav
      241 sgadevyedi lqgnrdfvcs stvatgrtrr miwvdpgdpp phallpykar liarkvqkfd
      301 ernwwqwgrg yyqserprvy vngrtrqpap fflhpcthyd gavlaifphc edidlaafrd
      361 alnavdwadl gfvcdgrflf tqrslahapl pehfrrflpe kg
//
LOCUS       WP_235864813             265 aa            linear   BCT 02-MAR-2025
DEFINITION  PEP-CTERM sorting domain-containing protein [Pseudothauera lacus].
ACCESSION   WP_235864813
VERSION     WP_235864813.1
KEYWORDS    RefSeq.
SOURCE      Pseudothauera lacus
  ORGANISM  Pseudothauera lacus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Rhodocyclales; Zoogloeaceae; Pseudothauera.
REFERENCE   1  (residues 1 to 265)
  AUTHORS   Haft,D.H., Paulsen,I.T., Ward,N. and Selengut,J.D.
  TITLE     Exopolysaccharide-associated protein sorting in environmental
            organisms: the PEP-CTERM/EpsH system. Application of a novel
            phylogenetic profiling heuristic
  JOURNAL   BMC Biol 4, 29 (2006)
   PUBMED   16930487
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019225.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07589.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Pseudothauera lacus"
                     /db_xref="taxon:2136175"
     Protein         1..265
                     /product="PEP-CTERM sorting domain-containing protein"
                     /calculated_mol_wt=27675
ORIGIN      
        1 mkkkllaalv alsasaqaga atilitqfdy tgytemastl aaaghtvnvv dtrtagtlas
       61 tlgstfydqv flfdltgtry lnnddvaala gfwnnrglvv dtrsygyhfq ptnaseqall
      121 qnvasnleaa gggvwvgtdh npewtrnanp flqeiginiv tgsysnpvnf adptsvllag
      181 vtptelwggg qtvgmapigv qpngvemfih fghertdgsi lpyisasfpl tgvppvnpvp
      241 epailgllgl glaglaatrr rklaa
//
LOCUS       WP_235864819             704 aa            linear   BCT 02-MAR-2025
DEFINITION  PAS-domain containing protein [Pseudothauera lacus].
ACCESSION   WP_235864819
VERSION     WP_235864819.1
KEYWORDS    RefSeq.
SOURCE      Pseudothauera lacus
  ORGANISM  Pseudothauera lacus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Rhodocyclales; Zoogloeaceae; Pseudothauera.
REFERENCE   1  (residues 1 to 704)
  AUTHORS   Hefti,M.H., Francoijs,K.J., de Vries,S.C., Dixon,R. and Vervoort,J.
  TITLE     The PAS fold. A redefinition of the PAS domain based upon
            structural prediction
  JOURNAL   Eur J Biochem 271 (6), 1198-1208 (2004)
   PUBMED   15009198
REFERENCE   2  (residues 1 to 704)
  AUTHORS   Ponting,C.P. and Aravind,L.
  TITLE     PAS: a multifunctional domain family comes to light
  JOURNAL   Curr Biol 7 (11), R674-R677 (1997)
   PUBMED   9382818
REFERENCE   3  (residues 1 to 704)
  AUTHORS   Zhulin,I.B., Taylor,B.L. and Dixon,R.
  TITLE     PAS domain S-boxes in Archaea, Bacteria and sensors for oxygen and
            redox
  JOURNAL   Trends Biochem Sci 22 (9), 331-333 (1997)
   PUBMED   9301332
REFERENCE   4  (residues 1 to 704)
  AUTHORS   Borgstahl,G.E., Williams,D.R. and Getzoff,E.D.
  TITLE     1.4 A structure of photoactive yellow protein, a cytosolic
            photoreceptor: unusual fold, active site, and chromophore
  JOURNAL   Biochemistry 34 (19), 6278-6287 (1995)
   PUBMED   7756254
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024267.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12860.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Pseudothauera lacus"
                     /db_xref="taxon:2136175"
     Protein         1..704
                     /product="PAS-domain containing protein"
                     /calculated_mol_wt=75787
     Region          31..153
                     /region_name="PAS_7"
                     /note="PAS fold; pfam12860"
                     /db_xref="CDD:432837"
     Region          222..685
                     /region_name="PRK13557"
                     /note="histidine kinase; Provisional"
                     /db_xref="CDD:237425"
ORIGIN      
        1 mplaaamqss iagpaagvdd avfrsmvgaa ldlfdqgvtv fdaglrlvaw nrrfvellef
       61 paallqtgtp yedfvrfnva rgeyshdgec agdrpeavva armaaarrfe phltrwvrpn
      121 grvlelrgqp mpdnagfvtf yaditaqqhr qdeiardkat leahiqrrta qltaanaelt
      181 aaieknreit valrysegrl rqitdtipah iayfdkaway ryanrryaqw fgwtpesivd
      241 qsiptvigar lfdqvaepvr ralggeevsy eytltaadgs erharstlvp dfspagqvlg
      301 cfvhavdite qrrtqsalaq aqkmeaigql tgglahdfnn mltvvsgnlt elresrrgdp
      361 iiaeyvepal qaasrgaali rrllafarqq plsprpvevn elvlgltsll rrslpeniti
      421 htchgepapl alvdphqles allnlalnar dampnggelr idagiealtg taagdlelpp
      481 gdyvqisvsd ngegmdgstl arvfepfftt kkasggtglg mamvygfvkq sgggvrirsr
      541 qavgttvall lpcaepgdga ageycpaagd pagwlrgrvv llveddpdvr rvvrkqlagl
      601 dcavleaesg eeaadllesv paislvvsdv vmhgsmdgha larfargyrp elpvilmsgy
      661 tdaagsindd lalpilakpf trealyaavs riapfmpggr dhgd
//
LOCUS       WP_235864820             376 aa            linear   BCT 02-MAR-2025
DEFINITION  nickel-dependent hydrogenase large subunit [Pseudothauera lacus].
ACCESSION   WP_235864820
VERSION     WP_235864820.1
KEYWORDS    RefSeq.
SOURCE      Pseudothauera lacus
  ORGANISM  Pseudothauera lacus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Rhodocyclales; Zoogloeaceae; Pseudothauera.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00374.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Pseudothauera lacus"
                     /db_xref="taxon:2136175"
     Protein         1..376
                     /product="nickel-dependent hydrogenase large subunit"
                     /GO_function="GO:0016151 - nickel cation binding [Evidence
                     IEA]"
                     /calculated_mol_wt=39641
     Region          <218..339
                     /region_name="HyaB"
                     /note="Ni,Fe-hydrogenase I large subunit [Energy
                     production and conversion]; COG0374"
                     /db_xref="CDD:440143"
ORIGIN      
        1 mnpaggllie aawdgrgvps arllnsrpqa akllvgrrid eamalipalf alcgkaqalt
       61 aqaalsaara epaadedars aaeraiaaea aqehlwrlml dwpalfgiep rrgrfaelhr
      121 qlgraaanga dsarevggqi ldlvaaella gfftmarepf slgefasrar rggsigaalg
      181 dllemgthap phgmaallpw qsaaewaael grvpdevfcs aptwqgapae tgplarhras
      241 mlvrllverg hpvaarlfaa vvdlsdwasr lrhplaedmp vvvdaaplge gagvacceta
      301 rgvlihalrv dgdtvaeyai vaptewnfhp agafalegsg wqapdletar rhlnalvlgl
      361 kpcvpfevrf tevgha
//
LOCUS       WP_235864852              79 aa            linear   BCT 02-MAR-2025
DEFINITION  SOS response-associated peptidase family protein [Pseudothauera
            lacus].
ACCESSION   WP_235864852
VERSION     WP_235864852.1
KEYWORDS    RefSeq.
SOURCE      Pseudothauera lacus
  ORGANISM  Pseudothauera lacus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Rhodocyclales; Zoogloeaceae; Pseudothauera.
REFERENCE   1  (residues 1 to 79)
  AUTHORS   Aravind,L., Anand,S. and Iyer,L.M.
  TITLE     Novel autoproteolytic and DNA-damage sensing components in the
            bacterial SOS response and oxidized methylcytosine-induced
            eukaryotic DNA demethylation systems
  JOURNAL   Biol Direct 8, 20 (2013)
   PUBMED   23945014
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014626.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02586.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Pseudothauera lacus"
                     /db_xref="taxon:2136175"
     Protein         1..79
                     /product="SOS response-associated peptidase family
                     protein"
                     /GO_function="GO:0003697 - single-stranded DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006974 - DNA damage response [Evidence
                     IEA]"
                     /calculated_mol_wt=8314
     Region          <4..78
                     /region_name="SRAP"
                     /note="SOS response associated peptidase (SRAP); cl03646"
                     /db_xref="CDD:470848"
ORIGIN      
        1 mhgtvittpa ndairplhdr tpvilapqny stwlaratep ehldsvissp pvvpvalfpv
       61 skavgnvknd spdliapve
//
LOCUS       WP_235864858             873 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Pseudothauera lacus].
ACCESSION   WP_235864858
VERSION     WP_235864858.1
KEYWORDS    RefSeq.
SOURCE      Pseudothauera lacus
  ORGANISM  Pseudothauera lacus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Rhodocyclales; Zoogloeaceae; Pseudothauera.
REFERENCE   1  (residues 1 to 873)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Pseudothauera lacus"
                     /db_xref="taxon:2136175"
     Protein         1..873
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=96994
     Region          48..272
                     /region_name="DAHL"
                     /note="DAHL domain; pfam19443"
                     /db_xref="CDD:466085"
     Region          212..873
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mtarlplaqp saatqmlanr psrllwllag vaavaillsw lffkadaina rahqqyerel
       61 rllrqadael naavlanrvg lqtdfdtiva taaevlrath aleqlpdflp atsldrlred
      121 idqlravqte ktrrielfkr enavlrnsla flpeatnryi adpqvtlads rpvgilvrgi
      181 lthahssnae fdtalwrqle aleatlpema earrerlrnl llharviier kpavdtltre
      241 ilgapsaalg ervslhyata yehaaatahn yrlvlyvlal vmagyvalam qrlqrasrel
      301 aranhdlker fdtlrrtqee lnlyatvftn asegmtitda dariiavnpa ftfitgytle
      361 evggqtpavl gsgrqdeafy rdmwatlnrd gqwqgeiwnr rrdgeifpew lsitavpnss
      421 gdtpshyigi fsditdrkaa earihhlahh daltnlpnrt llqdrldqai lqsrrrerha
      481 avlfidldrf kpindtlghe vgdalltqva rrcqravret dtvarhggde fvvvlpeldn
      541 aqdaavlark llaalgepyr lgeheltvta sigialyped gqsasmllrn adaamygaka
      601 dgrnafqfys aelntaslge lllenqlrga ldrdelvlfy qpkvdgrsgq lagaeallrw
      661 rhpelgllap grfvpaaees glivpigewv lrsacrqmra wldaglqppp vavnlsaqql
      721 aqqdlvalvh dalsshrlpa gmleleltet mlmrdvdhti evlarlramg vrlaiddfgs
      781 gysslaylkl fevdvlkidr sfvndirsdg aegtiaaavi alahslgqqv vaegvendyq
      841 rdflarhhcd qfqgylfgrp epvadftrrl hpr
//
LOCUS       WP_235864878             867 aa            linear   BCT 02-MAR-2025
DEFINITION  chemotaxis protein CheB [Pseudothauera lacus].
ACCESSION   WP_235864878
VERSION     WP_235864878.1
KEYWORDS    RefSeq.
SOURCE      Pseudothauera lacus
  ORGANISM  Pseudothauera lacus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Rhodocyclales; Zoogloeaceae; Pseudothauera.
REFERENCE   1  (residues 1 to 867)
  AUTHORS   West,A.H., Martinez-Hackert,E. and Stock,A.M.
  TITLE     Crystal structure of the catalytic domain of the chemotaxis
            receptor methylesterase, CheB
  JOURNAL   J Mol Biol 250 (2), 276-290 (1995)
   PUBMED   7608974
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013502.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01339.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Pseudothauera lacus"
                     /db_xref="taxon:2136175"
     Protein         1..867
                     /product="chemotaxis protein CheB"
                     /GO_component="GO:0005737 - cytoplasm [Evidence IEA]"
                     /GO_function="GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA]"
                     /GO_function="GO:0008984 - protein-glutamate
                     methylesterase activity [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /GO_process="GO:0006935 - chemotaxis [Evidence IEA]"
                     /calculated_mol_wt=95467
     Region          28..206
                     /region_name="CheB-CheR_fusion"
                     /note="Chemotaxis response regulator protein-glutamate
                     methylesterase, CheB, fused with CheR domain; cd16434"
                     /db_xref="CDD:319753"
     Region          229..489
                     /region_name="CheR"
                     /note="Methylase of chemotaxis methyl-accepting proteins
                     [Signal transduction mechanisms]; COG1352"
                     /db_xref="CDD:440963"
     Region          <573..>734
                     /region_name="PRK02224"
                     /note="DNA double-strand break repair Rad50 ATPase"
                     /db_xref="CDD:179385"
     Region          664..741
                     /region_name="ZapB"
                     /note="Cell division protein ZapB, interacts with FtsZ
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG3074"
                     /db_xref="CDD:442308"
     Region          741..846
                     /region_name="PAS_10"
                     /note="PAS domain; pfam13596"
                     /db_xref="CDD:404482"
ORIGIN      
        1 mdepdtatqa spdpgdlphp spggcfpvvg igasagglea leqflsgvpp dsgmayvviq
       61 hldpthkgmm pellqratpl pvmqaknglk lradhvyvlp pnrdmsildg vlhlfkptap
      121 rgqrlpidff lralavdrrq qavgvllsgm gsdgtaglra ikenaglalv qdpaeaafas
      181 mpqsgidaam vdivgpaatl pgriiaalrq gaivdesdpa vdgqlksgle kvlilmrthn
      241 gqdfsrykks tlyrrierrm gihqirriad yvrllqnnpq eldllfrefl igvttffrdp
      301 aawdslrdla fpalfassps gralrawvpg cstgeeaysl aitfkealer hqpagryalq
      361 ifatdlahda idqarqghys agisaevsad rlaryfiptd ngyqvgkevr emvifapqnm
      421 aqdppftkld llscrnvliy ftselqkkll alfhyslipg gvlflgnset igsatdlfap
      481 ldsksrlyrc idgrphmvsv dfpthfraph gagseppatp paanlqtlad qlllrqfapa
      541 avltndrgdi iyingrtgry lepaagkanw nihamarggl rqalgealqq visdhgrver
      601 hdlaveddgk tsridltvqy iedpeplrgm vmivfaglrr ktaakrrtka gaqssreael
      661 eaaltqsqne vrnlrdrmqt seeelkstne elqstneelq stneelttsk eemqslneel
      721 qtvnvelqsk vddlsrvndd mqnllnstei atvflddrlr vrrftphaah iikliaadvg
      781 rplsdlasdl dypefesdar evlrtliyse kpmatrdgrw frvrimpyrt meniingvvi
      841 tfidisvakr leaelratva siegnps
//
LOCUS       WP_235864895             445 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Pseudothauera lacus].
ACCESSION   WP_235864895
VERSION     WP_235864895.1
KEYWORDS    RefSeq.
SOURCE      Pseudothauera lacus
  ORGANISM  Pseudothauera lacus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Rhodocyclales; Zoogloeaceae; Pseudothauera.
REFERENCE   1  (residues 1 to 445)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Pseudothauera lacus"
                     /db_xref="taxon:2136175"
     Protein         1..445
                     /product="AMP-binding protein"
                     /calculated_mol_wt=47024
     Region          7..428
                     /region_name="MenE/FadK"
                     /note="O-succinylbenzoic acid-CoA ligase MenE or related
                     acyl-CoA synthetase (AMP-forming) [Lipid transport and
                     metabolism]; COG0318"
                     /db_xref="CDD:440087"
ORIGIN      
        1 mhlpliahtd phavvawrhg aaisarrfla dvrtlaamlp paghilnacs dryrfavgfc
       61 atllagktsl lpstytadtl rqladfapdc hllceddpat qvlpamrfpa lddaepdgaf
      121 evpriaadhv aawvftsgst gtpvphrkrw galvanvrae aaalgfdpah patlvgtvpp
      181 qhmygfestv llallngaaf dagrpfypad iaaalararp pavlvstpfh lakvldagia
      241 lppaalllsa taplpdalar raeaafgaal leiygstetg qvatrrpacd eawtpfpgvr
      301 letretrtwa ggghieeeva lsdliehlad grfllrgrha dlvniagkrt slgwlnqqll
      361 gipgvvdgsf ylpdddgsai vrlaafvvap glteaalrsa lrarmdaafl prpllfvdsl
      421 prnatgklpr aacaallaah rhger
//
LOCUS       WP_235864946              99 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2345 domain-containing protein [Pseudothauera lacus].
ACCESSION   WP_235864946
VERSION     WP_235864946.1
KEYWORDS    RefSeq.
SOURCE      Pseudothauera lacus
  ORGANISM  Pseudothauera lacus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Rhodocyclales; Zoogloeaceae; Pseudothauera.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021611.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10106.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Pseudothauera lacus"
                     /db_xref="taxon:2136175"
     Protein         1..99
                     /product="DUF2345 domain-containing protein"
                     /calculated_mol_wt=9704
     Region          <6..97
                     /region_name="DUF2345"
                     /note="Uncharacterized protein conserved in bacteria
                     (DUF2345); pfam10106"
                     /db_xref="CDD:431059"
ORIGIN      
        1 mragghagqa iglvagaiap gegntglali aahddidlaa hsstfalqar dtldlaslae
       61 hidfaaarri viavdggasi tldgsitvrc pgnltihvg
//
LOCUS       WP_235864966             517 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF726 domain-containing protein [Rhodococcoides fascians].
ACCESSION   WP_235864966
VERSION     WP_235864966.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcoides fascians
  ORGANISM  Rhodococcoides fascians
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcoides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017121.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05277.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Rhodococcoides fascians"
                     /db_xref="taxon:1828"
     Protein         1..517
                     /product="DUF726 domain-containing protein"
                     /calculated_mol_wt=52802
     Region          195..514
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 mrcngalndl eprvlgddal gtnpalvhna wafakhdhly rtltdgaere shhtqamahr
       61 ktaagiaelv dklgtaskns wcsacftrsd hrrltqgfgt ipaylcescg sptlgcagpg
      121 canmatrgfa avlvprycae hkheipgfek aslnfgaled yheflnferr nlalgsriaa
      181 isvlsagala tgaflaapai ggaigslsia gggyagaaas syglallggg siaagglgmv
      241 ggtavvaavg galggalgss vttayigadk sfnielikpg sgvavivang lfsegtdtrs
      301 dwkklvaqry pgspiyrvhw gsndlgdlaa makalggqpa aalgikglaa katkagakkl
      361 gplapalaaa avaknpwhta rvkadrtgva lagllartda ksyvlvghsl garvaataae
      421 tlarskskpk idtvhllgaa igskgdwrll snavtdavhn yhssnddvlr ygyktaqggq
      481 tavgyagfrt efarmhdhdv saivaghsky lqsvqls
//
LOCUS       WP_235864984            1005 aa            linear   BCT 02-MAR-2025
DEFINITION  toxin VasX [Pseudomonas frederiksbergensis].
ACCESSION   WP_235864984
VERSION     WP_235864984.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas frederiksbergensis
  ORGANISM  Pseudomonas frederiksbergensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042700.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20249.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Pseudomonas frederiksbergensis"
                     /db_xref="taxon:104087"
     Protein         1..1005
                     /product="toxin VasX"
                     /calculated_mol_wt=110159
     Region          25..154
                     /region_name="MIX_IV"
                     /note="Marker for type sIX effectors domain, clan IV;
                     cd20708"
                     /db_xref="CDD:410949"
     Region          34..914
                     /region_name="BTH_I2691_fam"
                     /note="T6SS effector BTH_I2691 family protein; NF041559"
                     /db_xref="CDD:469444"
ORIGIN      
        1 mnkphpadla aaaaskspig slgacplrqt hvqllplryg lvekpldpsa elklpyaltt
       61 rplgirllrd gwlyvidsvt ghlheyqvln gvisallhkg akvdddqrtp ieerpalvfs
      121 rrstlqvsfa evqwtaakca qvldsraerd hfmqavdlgp vhcqtggthl ltvaqgkrwl
      181 aeiatdparq vqaaqdrteq eaesppdavl lptlhvsdap eherepylwe qprrfreahi
      241 gellgrvrpa yqddtlflvv qddlgvlrdl adyqdtvvgw vddwsnadhn erdyllacyi
      301 eslsqlsaad ignladasdd prvqalfadl qqlpepdreh trkalleyln kggkvaplda
      361 pvppaleqar keaqaeafkf aryqgatpdf tahsrasdea drryyarhhf klapdafvdr
      421 hldtliklgh eqnkrivevl egssfsgkrg vndfihrpam daalfqhrdd lgrwnrller
      481 itadrtllva agrfhrsawy ydaqdqaqch qafsaeyacl kdicrsdhas ekmlgyleqh
      541 peltrplfyt lplrlqpera aqyttlfnag mgmfnnlphw lgelhnieqp hlpalddlpe
      601 ptravadaaq hslspalnlg lsralegfdl aggkvpdlde lfrrlpkals prildaaktt
      661 gvtftvaspa ehaalqtnlk ellserdylk mltrernqft hnknraghkt pravelqtei
      721 vrvraeltll egrlagalsp iaelpdqsmr lygatparag vtlvfppaqq levrsllkdi
      781 rlgvgsvpna slirsegmgs lvflvqgvnl vsvmretfnq srdkrklepl igasfttgaa
      841 gftaaqslad talkarsaal vaglqhhalq nvpvqmgkmh vglggftyvl gfassmvsli
      901 nhhqnwqqat rsgnaaaqns aalatagaag mttvnaygls htgraainvl vaknsaarta
      961 awaaagtrls tvffrfnlag alftvlelga pgyttattsa ltisg
//
LOCUS       WP_235864989            1722 aa            linear   BCT 02-MAR-2025
DEFINITION  NEL-type E3 ubiquitin ligase domain-containing protein [Pseudomonas
            frederiksbergensis].
ACCESSION   WP_235864989
VERSION     WP_235864989.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas frederiksbergensis
  ORGANISM  Pseudomonas frederiksbergensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 1722)
  AUTHORS   Quezada,C.M., Hicks,S.W., Galan,J.E. and Stebbins,C.E.
  TITLE     A family of Salmonella virulence factors functions as a distinct
            class of autoregulated E3 ubiquitin ligases
  JOURNAL   Proc Natl Acad Sci U S A 106 (12), 4864-4869 (2009)
   PUBMED   19273841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025849.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14496.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1722
                     /organism="Pseudomonas frederiksbergensis"
                     /db_xref="taxon:104087"
     Protein         1..1722
                     /product="NEL-type E3 ubiquitin ligase domain-containing
                     protein"
                     /GO_function="GO:0004842 - ubiquitin-protein transferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0016567 - protein ubiquitination [Evidence
                     IEA]"
                     /calculated_mol_wt=194822
     Region          22..700
                     /region_name="DUF6543"
                     /note="Family of unknown function (DUF6543); pfam20178"
                     /db_xref="CDD:466329"
     Region          <1163..>1324
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          1182..1212
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1213..1235
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1236..1261
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1262..1283
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1284..1303
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1392..1616
                     /region_name="NEL"
                     /note="C-terminal novel E3 ligase, LRR-interacting;
                     pfam14496"
                     /db_xref="CDD:433992"
ORIGIN      
        1 mslltsttvp tpgwylkasa idrqylkell dkrwllqrlv daplqdlqqd irafakplls
       61 lsmssnfnsh edvsqltlkl yvpdriifgi drgashlres slldaalhnf eepetaadyf
      121 rtgsgvyrsn frgepslipa mtvskiaalc rrldlggqyq ahlqarllpa daqkrqtleq
      181 hgaasekaaf elasliallk ddissnaygv lrqvrehtsd irfhhrplhp hrlslmgfkl
      241 hgvvlfsaeg dagmiqaave alapdarasw ldwssvlstm spgldldkfk llqaffangp
      301 tgvseemlrq qdiyrqsrls gpviaympdd pqhplkeyas ladfmktlir qlrepdyqaf
      361 fsrfvahkdq grffararer lsritwqqre pldmgpwwre tavenpnaep ithrltgelw
      421 pllyrlkrdk alsdaraiav ptgdedattr wkrlssyldi gwnvfnfaam lvpglgeaml
      481 almvaqmaae llegiedwsk gdrdeasahi ngviinfaql almsaghvip qaaripvkps
      541 plidnlkpve lptgktrlwk pdltpyehpl tlpteakpdd lglyrhndqq wlrleqkhyq
      601 vrqdpatgeh rlqhptrpna yqpmvehnga gawkaeteqp lgwdttrlmr rlddsmedys
      661 aatlakiqkv sgveegvlrr lhaehetppa llrdtlkrfn tyadaerype qilanqvpee
      721 msgflpatlv elprwpesra levfegddrt gasvkhgnam atgpqsikis rsevvagklp
      781 ervieslnpt elremlgaqv andtpsrida lrsrlamqar kqhkrlfdal yksrnvsdsa
      841 qvrllvddsp qlpasvaqel ldsaepadlq hltekqrlpl rlrqqtrraq ervrlnraye
      901 glyldelest dtrrlelatl aslpgwstqv rieirhlgfs gdllasagaa dapirkvlvl
      961 dedgryqarg aedqhlhgtd dlyasvlhal pdternalgy dihesarlkd avrrsplshe
     1021 qfepilleqp irkpvydsqa mrlpggmlgy lrelagggge qssqarirkl ypafteeest
     1081 allerfnqqg ipvdmqleel eleferlntt lkrwvnsptr dfrlspsgvg ewnarnqfar
     1141 kirqcwqrtg pkqfdsfgnv vgqkldlssf plnlhfkkmp alegnfdhvt ylklynagit
     1201 daeqsflkpf rkvraldlgr nklttlprhi admphlnfle ltgnrivlkp advemlgrct
     1261 klqtlalagn plsllpnisr mpdlhtllly dtgattwppg lfdlerprhf hldlqrnllt
     1321 hipevtpgsv daellartll srqppfmspe nlellkdyis svgldperpy pprgvrdtls
     1381 wqqgitfdew vekqklwdal edefnstgff deirrltqsa dftaggayrt dltakmwrmi
     1441 etmakdaelr tkffteatar sqcvdgatql fnvlgvdvlv qealelgnps lteaqliela
     1501 rgksrldeve riarrhiidr eaagerfrrv daegnvsgti devevhlafm tdlaerldlp
     1561 wqargmqfrq iagvtgemie nayqrilgle egdllrdlia eqpfwrtyvq rsnrarfraf
     1621 drktvattef kvalderasr tdltleerek lkeeirilaa elgkpesafa pgqvvtdeaf
     1681 aaeldlikea retllkqltq qamdraklqr vepplftvdt ns
//
LOCUS       WP_235864996             642 aa            linear   BCT 02-MAR-2025
DEFINITION  dermonecrotic toxin domain-containing protein [Pseudomonas
            frederiksbergensis].
ACCESSION   WP_235864996
VERSION     WP_235864996.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas frederiksbergensis
  ORGANISM  Pseudomonas frederiksbergensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 642)
  AUTHORS   Kitadokoro,K., Kamitani,S., Miyazawa,M., Hanajima-Ozawa,M.,
            Fukui,A., Miyake,M. and Horiguchi,Y.
  TITLE     Crystal structures reveal a thiol protease-like catalytic triad in
            the C-terminal region of Pasteurella multocida toxin
  JOURNAL   Proc Natl Acad Sci U S A 104 (12), 5139-5144 (2007)
   PUBMED   17360394
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042510.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20178.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Pseudomonas frederiksbergensis"
                     /db_xref="taxon:104087"
     Protein         1..642
                     /product="dermonecrotic toxin domain-containing protein"
                     /calculated_mol_wt=71813
ORIGIN      
        1 mddtqdlilt nsadaqalqa lvpdlvddcp dlyamayeia qdiltrhhit ditpdnvwwh
       61 rfhgaqsssk aftgwqhile kpkesmtfpq lvmhrfsvhd qdnadlldly ggfyrvgdda
      121 esydetnevr lhasdvlkaf wdinfadryk taiatfwekh sanfralakc tfiakaiedy
      181 esghlsrehf tlvlracagn vsrpltrqml mdeaatasgl sirkfcidef vstdifsitd
      241 dgdlnilyip gelrgfhcfn kveelhewlv nevkdaegre rmlmrfkqqe rdivqekpts
      301 lghklanftg igllthflen tqyeniglth ayevlpdent aadhhllhyr geivsgdaft
      361 hlsqstherm lsdanyllhs ngelrkklwi gylnafnrvf gpmaaaawpa alvvigagia
      421 nvglhidqai nattpaerka aikgailgsv dilfnlpflr gasefaeaae aaeaeetitp
      481 gedlkspspp lqlpfesikp dpgdasllap fetneilegy ssingegkfq giyqpetggn
      541 yiamgdsfyq vrysnelktw tiidpvdphs fyrnipvrld emgewvpltr pglagggkfs
      601 dlfaraeppl pdfdapatay dvpqeikpal krqpmvwrqr ai
//
LOCUS       WP_235865009            2138 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5801 repeats-in-toxin domain-containing protein [Pseudomonas
            frederiksbergensis].
ACCESSION   WP_235865009
VERSION     WP_235865009.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas frederiksbergensis
  ORGANISM  Pseudomonas frederiksbergensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 2138)
  AUTHORS   Cirillo,S.L.G., Lum,J. and Cirillo,J.D.
  TITLE     Identification of novel loci involved in entry by Legionella
            pneumophila
  JOURNAL   Microbiology (Reading) 146 (Pt 6), 1345-1359 (2000)
   PUBMED   10846213
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039867.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19116.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2138
                     /organism="Pseudomonas frederiksbergensis"
                     /db_xref="taxon:104087"
     Protein         1..2138
                     /product="DUF5801 repeats-in-toxin domain-containing
                     protein"
                     /calculated_mol_wt=216328
     Region          208..328
                     /region_name="DUF5801"
                     /note="Domain of unknown function (DUF5801); pfam19116"
                     /db_xref="CDD:465976"
     Region          363..>755
                     /region_name="AidA"
                     /note="Autotransporter adhesin AidA [Cell
                     wall/membrane/envelope biogenesis, Intracellular
                     trafficking, secretion, and vesicular transport]; COG3468"
                     /db_xref="CDD:442691"
     Region          602..742
                     /region_name="DUF5801"
                     /note="Domain of unknown function (DUF5801); pfam19116"
                     /db_xref="CDD:465976"
     Region          754..896
                     /region_name="DUF5801"
                     /note="Domain of unknown function (DUF5801); pfam19116"
                     /db_xref="CDD:465976"
     Region          908..1050
                     /region_name="DUF5801"
                     /note="Domain of unknown function (DUF5801); pfam19116"
                     /db_xref="CDD:465976"
     Region          1062..1204
                     /region_name="DUF5801"
                     /note="Domain of unknown function (DUF5801); pfam19116"
                     /db_xref="CDD:465976"
     Region          1216..1358
                     /region_name="DUF5801"
                     /note="Domain of unknown function (DUF5801); pfam19116"
                     /db_xref="CDD:465976"
     Region          1370..1512
                     /region_name="DUF5801"
                     /note="Domain of unknown function (DUF5801); pfam19116"
                     /db_xref="CDD:465976"
     Region          1524..1666
                     /region_name="DUF5801"
                     /note="Domain of unknown function (DUF5801); pfam19116"
                     /db_xref="CDD:465976"
ORIGIN      
        1 manhkknssl tsnqagntga plyaptvttd lsdyapgsta titaggfapg stvkleveha
       61 tgagadnvwg tpddvldtdt geghepwyvt dggagdldgq vngsvttswy vnpddsagat
      121 flltaasagd drvfgtsdda vattsftdsa lsvvatganv tldetaglqn aaatpspaed
      181 andndilvas lpsifstrlt algagtatga alsgytgavg ntgsnaftvt adpgatitni
      241 sfvdsagapl ngldsgldtl ngtsillytd anndnivlgr aggstgaivf aayieetgsp
      301 vsggkiwtve yqpikhtdta npddslslln kvfigasqdl efslanapsg qnlflmftka
      361 nptvvddggv lritdptiia tgkdpanqst gvnistgdti ntsqaggptt fgtnsqmite
      421 qegirysfvt garqdltipn ldqteadvea ninftgvfna ksasfdvvql qsgksavvki
      481 safstavesg tnfidgyand tpvaitnvrv fnsagvvien sngsvndgai gitfsggvat
      541 itgvlagyqi eyttttdhnr vlvengaald akgnnhadfd iggftlvqas vskteigsqm
      601 ifeddgpsis ttgteptltv detvlatnat qnfaanfssa fgadgagtlt yalgvvvgas
      661 gltdtatgev vnlslngtvv egrtatsndl vftvsvaang dvtldqirav vhpdttnsdd
      721 sktlsadnlv tltatktdgd gdsaqatlni gqnlvfkddg psisttgtep tltvdetvla
      781 tnatqnyaan fssafgadga gtltyalavv agasgltdta tgqavnlsln gtvvegrtat
      841 snelvftvsv aangdvtldq iravvhpdtt npddsktlta dnlvtltatk tdgdgdsaqa
      901 tlnigqnlvf kddgpsintt gteptltvde tvlatnatqn faanfssafg adgagtltya
      961 lgvvvgasgl vdtatgqavn lslnggvvqg rtatsndlvf tvsvaangdv tldqiravvh
     1021 pdttnpddsk tltadnlvtl tatktdgdgd saqatlnigq nlvfkddgps isttgteptl
     1081 tvdetvlatn atqsfsanfs safgadgagt ltyalgvvag asgltdtatg qavnlslngg
     1141 vvqgrtatsn dlvftvsvaa ngdvtldqir avvhpdttnp ddsktltadn lvtltatktd
     1201 gdgdsaqatl nigqnlvfkd dgpsisttga eptltvdetv latnatqsfa anfssafgad
     1261 gagtltyvlg vvagasgltd tatgqavnls lngtvvegrt atsnelvftv svaangdvtl
     1321 dqiravvhpd ttnsddsktl tsdnlvtlta tktdgdgdsa qatlnigqnl vfkddgpsis
     1381 ttgteptltv detvlatnat qnyaanfssa fgadgagtlt yalavvagas glvdtatgqv
     1441 vnlslngtvv egrtatsndl vftvsvaang dvtldqlrav vhpdttnpdd sktltadnlv
     1501 tltatktdgd gdsaqatlni gqnlvfkddg psisttgtep tltvdetvla tnatqnfaan
     1561 fssafgadga gtltyalgvv vgasglvdta tgqavnlsln ggvvqgrtat sndlvftvsv
     1621 aangdvtldq iravvhpdpt npddsktlsa dnlvtligtk tdgdgdsaqa tlnigqnlif
     1681 kddgpslafg nligtgsvla qygfwnnsag adglgttgln islvngefti vrpdnttstg
     1741 tgtlteqtps pdangayqfa gtltgdfdnn antadtsvdy tltayangsy aldleqgfgs
     1801 tivqssedgs lgaggpdpvr tllippqnpp tipspseeiv ffgvnattta geifsaitvg
     1861 apdltetqie aggfafigta nmnvstsgig iannnldgng taginagdes fvinpetllt
     1921 slkvfidnsv qgydpateel yytifyddgt tsgsptkvla adltsedggq msfliervds
     1981 klidavqltm glgvikipvi efiqesenla sdlqlqfsat ltdkdgdsat stfdanlfan
     2041 dpanalfdft lvgtggerda fnidlsvden lyqvtgfdad pslrdtlvln gdqnavvqsi
     2101 disgadsivt iaedggqttt itlvgvdvla sdivfgga
//
LOCUS       WP_235865014             385 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin-dependent oxidoreductase [Pseudomonas
            frederiksbergensis].
ACCESSION   WP_235865014
VERSION     WP_235865014.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas frederiksbergensis
  ORGANISM  Pseudomonas frederiksbergensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 385)
  AUTHORS   Kisker,C., Schindelin,H., Pacheco,A., Wehbi,W.A., Garrett,R.M.,
            Rajagopalan,K.V., Enemark,J.H. and Rees,D.C.
  TITLE     Molecular basis of sulfite oxidase deficiency from the structure of
            sulfite oxidase
  JOURNAL   Cell 91 (7), 973-983 (1997)
   PUBMED   9428520
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012401.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00174.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Pseudomonas frederiksbergensis"
                     /db_xref="taxon:104087"
     Protein         1..385
                     /product="molybdopterin-dependent oxidoreductase"
                     /calculated_mol_wt=42960
     Region          25..381
                     /region_name="SO_family_Moco"
                     /note="Sulfite oxidase (SO) family, molybdopterin binding
                     domain. This molybdopterin cofactor (Moco) binding domain
                     is found in a variety of oxidoreductases, main members of
                     this family are nitrate reductase (NR) and sulfite oxidase
                     (SO). SO catalyzes the...; cl00199"
                     /db_xref="CDD:469652"
     Site            order(64,66,68,115,179,208,213,221,224,226..227)
                     /site_type="active"
                     /note="Moco binding site [active]"
                     /db_xref="CDD:238198"
     Site            115
                     /site_type="other"
                     /note="metal coordination site [ion binding]"
                     /db_xref="CDD:238198"
ORIGIN      
        1 mvsllprqal sgspdsaiag qtasreqvry pektgmilit drppqletpl hffrqdltpn
       61 sahfvrwhls gyptevdtrt frlrldglvd kpqsftleel vkgfdpvtlv amnqcsgnar
      121 slfspqppgs qwqfgamgna qwtgvrlkdv laragvksga vevafsglde spmpglpkvv
      181 kslkfdhavd gdvmiayamn geplpmlngf plrlvvpgwy atywikslah ievlekplsn
      241 iwmdvayrip dnpeineepg nlakktvpin rfathsifvr pepeeqllln hpmmleglan
      301 dggdgiarve vsvdngrtwv dalldpeigr fswrrwrylw tprekgrytf lvratnrage
      361 gqpvtqwnrg gfarrmiest sgmvv
//
LOCUS       WP_235865017             720 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein [Pseudomonas
            frederiksbergensis].
ACCESSION   WP_235865017
VERSION     WP_235865017.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas frederiksbergensis
  ORGANISM  Pseudomonas frederiksbergensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 720)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Pseudomonas frederiksbergensis"
                     /db_xref="taxon:104087"
     Protein         1..720
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=79918
     Region          36..>136
                     /region_name="COG4908"
                     /note="Uncharacterized conserved protein, contains a NRPS
                     condensation (elongation) domain [General function
                     prediction only]"
                     /db_xref="CDD:443936"
     Region          197..255
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; pfam00550"
                     /db_xref="CDD:425746"
     Region          300..693
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mernpdtatq lsvsdfeeha wllqqqypeq alkhfsawrf tdevdparle aalkavithi
       61 pelnvryrfn degellkvre ddwracvaml qadddsqaqe lllahqsqpw daenqpplaa
      121 livqiktdvi lafvlhqvld qtcreddlyr mtldayagrs vgaphlpwlq rhgtagadaa
      181 dtvavappad agkvvtvile efrsalgept maqdddffdf gghsllatri igkllsshgi
      241 evqfndffst psaaalasra qvigtagaca lseqahevqk apfalaqasl grayaafefg
      301 tifnlpfald fldevderlf eqaftdlier haslrttfhf eageayqqri apgqlgrfkw
      361 fwssgesega slaseasyqf dlsrelpmrv rflrdpqsqr qtlsllvhhm aidewslnvm
      421 meelgkayla ravgkapvwe apapsfheys vheqakgmnq qhlaywtdml rpatlglalp
      481 avdgasraav geistraewf eikpdqalid hlysfarqnn sslfgvvysa ialalhkvgg
      541 lqdlvigtsa sgrtdpayye tvgyfttmva hrvqfdsrqt vgalientsr linesmayad
      601 vpmehiqqal gmtpadgllf dvyvqihann alngalptpd arsiryrhid pdknqsmfgi
      661 qfeimenmld gqrslrlvvt yrsdrysaeq marvsaaieq vfalfvspeg aavkvehvra
//
LOCUS       WP_235865052             200 aa            linear   BCT 02-MAR-2025
DEFINITION  MATE family efflux transporter [Pseudomonas frederiksbergensis].
ACCESSION   WP_235865052
VERSION     WP_235865052.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas frederiksbergensis
  ORGANISM  Pseudomonas frederiksbergensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01554.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Pseudomonas frederiksbergensis"
                     /db_xref="taxon:104087"
     Protein         1..200
                     /product="MATE family efflux transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=22627
     Region          <1..178
                     /region_name="NorM"
                     /note="Na+-driven multidrug efflux pump, DinF/NorM/MATE
                     family [Defense mechanisms]; COG0534"
                     /db_xref="CDD:440300"
ORIGIN      
        1 mlsfiskslg daslsayqas lhflsfvymi sigvgnatgi vaarhfklkk fyslsttyiq
       61 giklgalilt pfllvcfffn eyisiiytsd vptrkliegn llisipflvf eyiyvvtrmt
      121 lrsmgdfwip tlftisllni lglilsvgll sfynysvhsi fvalvlcsff lmsfllwrlg
      181 sllrqlnhql verqlpydra
//
LOCUS       WP_235865062             209 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5682 family protein, partial [Streptomyces cacaoi].
ACCESSION   WP_235865062
VERSION     WP_235865062.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces cacaoi
  ORGANISM  Streptomyces cacaoi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040143.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18934.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Streptomyces cacaoi"
                     /db_xref="taxon:1898"
     Protein         1..>209
                     /product="DUF5682 family protein"
     Region          36..>193
                     /region_name="DUF5682"
                     /note="Family of unknown function (DUF5682); pfam18934"
                     /db_xref="CDD:436841"
ORIGIN      
        1 mtdavdtkgr aargagpegp lllgirhhgp gsaravraal dayaprvvli egppegdavv
       61 plaaspdmvp pvallahavn epgkaafwpl ahfspewval rwaaehgvpv rfidlpaaha
      121 lalgdgdppa eadgeagegg ardggpgaaa pgggrgappa aeelrldpla alaeaagydd
      181 perwwedvve hrgtsapapa papdgpapa
//
LOCUS       WP_235865080             498 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxyl transferase domain-containing protein [Streptomyces
            cacaoi].
ACCESSION   WP_235865080
VERSION     WP_235865080.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces cacaoi
  ORGANISM  Streptomyces cacaoi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 498)
  AUTHORS   Zhang,H., Yang,Z., Shen,Y. and Tong,L.
  TITLE     Crystal structure of the carboxyltransferase domain of
            acetyl-coenzyme A carboxylase
  JOURNAL   Science 299 (5615), 2064-2067 (2003)
   PUBMED   12663926
REFERENCE   2  (residues 1 to 498)
  AUTHORS   Thornton,C.G., Kumar,G.K., Haase,F.C., Phillips,N.F., Woo,S.B.,
            Park,V.M., Magner,W.J., Shenoy,B.C., Wood,H.G. and Samols,D.
  TITLE     Primary structure of the monomer of the 12S subunit of
            transcarboxylase as deduced from DNA and characterization of the
            product expressed in Escherichia coli
  JOURNAL   J Bacteriol 175 (17), 5301-5308 (1993)
   PUBMED   8366018
REFERENCE   3  (residues 1 to 498)
  AUTHORS   Toh,H., Kondo,H. and Tanabe,T.
  TITLE     Molecular evolution of biotin-dependent carboxylases
  JOURNAL   Eur J Biochem 215 (3), 687-696 (1993)
   PUBMED   8102604
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013225.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01039.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Streptomyces cacaoi"
                     /db_xref="taxon:1898"
     Protein         1..498
                     /product="carboxyl transferase domain-containing protein"
                     /calculated_mol_wt=50334
     Region          <76..269
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     Region          300..495
                     /region_name="AccA_sub"
                     /note="carboxyltransferase subunit alpha; NF041504"
                     /db_xref="CDD:469391"
ORIGIN      
        1 mdpsgdtapp rrtaraalaq vaeefrefep yggtdaepyg gtdaepyggt daepyggtda
       61 evcggaeeps sdgdgplgwp gygaarqraa artgeresvv cgtgrvagve avllsfefgy
      121 lggslgertg arieaahrta rarrlpvvsi vatggsrmqe gmralvqlqr varqtsltrr
      181 aglaqlavvr dpttgggwat laaaadvvla lpgaqaafag srvrpagadp aaytaeaqha
      241 aghldqlvpe aalgravgrw lalltgggpa pepapvpyal patdgpgaaa agalprtgge
      301 avararaagp praeaylday fddreeisgd rcsgtdpgmr cgfgrhagrt vafaaqcgtp
      361 trpagyrtav rllrtadrlg ipvltlidtp gaangpeder agtggavaet faavaetgvp
      421 vtslligegg sggalalaap erlwttpdsy fsviapesaa avlkrgpdrv aetaeslrlr
      481 pqdavtlgva rgvappap
//
LOCUS       WP_235865100             331 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding oxidoreductase, partial [Streptomyces cacaoi].
ACCESSION   WP_235865100
VERSION     WP_235865100.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces cacaoi
  ORGANISM  Streptomyces cacaoi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 331)
  AUTHORS   Lu,G., Campbell,W.H., Schneider,G. and Lindqvist,Y.
  TITLE     Crystal structure of the FAD-containing fragment of corn nitrate
            reductase at 2.5 A resolution: relationship to other flavoprotein
            reductases
  JOURNAL   Structure 2 (9), 809-821 (1994)
   PUBMED   7812715
REFERENCE   2  (residues 1 to 331)
  AUTHORS   Hyde,G.E., Crawford,N.M. and Campbell,W.H.
  TITLE     The sequence of squash NADH:nitrate reductase and its relationship
            to the sequences of other flavoprotein oxidoreductases. A family of
            flavoprotein pyridine nucleotide cytochrome reductases
  JOURNAL   J Biol Chem 266 (35), 23542-23547 (1991)
   PUBMED   1748631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013161.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00970.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Streptomyces cacaoi"
                     /db_xref="taxon:1898"
     Protein         1..>331
                     /product="FAD-binding oxidoreductase"
     Region          31..262
                     /region_name="FNR_iron_sulfur_binding_1"
                     /note="Iron-sulfur binding ferredoxin reductase (FNR)
                     proteins combine the FAD and NAD(P) binding regions of FNR
                     with an iron-sulfur binding cluster domain.
                     Ferredoxin-NADP+ (oxido)reductase is an FAD-containing
                     enzyme that catalyzes the reversible electron...; cd06215"
                     /db_xref="CDD:99811"
     Site            order(63,77..80,94..96,98,102..104,143,146,260,262)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99811"
     Site            order(77,79..80)
                     /site_type="other"
                     /note="FAD binding motif [chemical binding]"
                     /db_xref="CDD:99811"
     Site            order(101,104,107,114,122,124)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99811"
     Site            order(138,142..145,147)
                     /site_type="other"
                     /note="beta-alpha-beta structure motif"
                     /db_xref="CDD:99811"
     Site            order(143..144,169..171,235..236)
                     /site_type="other"
                     /note="NAD binding pocket [chemical binding]"
                     /db_xref="CDD:99811"
     Region          <264..>329
                     /region_name="rad23"
                     /note="UV excision repair protein Rad23; TIGR00601"
                     /db_xref="CDD:273167"
ORIGIN      
        1 mtgtstlpgs galpaaaplp padgaaaehl lvckqvhrvt hdmttfsfep aeprlfrhdp
       61 gqylvfsfei dgrrtdrcyt lssppsrphl aaitvkrvpg grvstwlheh fapgdvvrar
      121 gpfgrfspar hpapaylfls ggsgitplmc mtrtlhdlas padvvfvhsa rtpddipfrq
      181 elellaatae rlrvvhvces dgaterwrgh rgrltpdtlh riapdflhre vftcgppgym
      241 ravrdmlsaa glprgryhee sfeavppagt qpapadgpst astqptqara pvpahtgapa
      301 rtppttgvpt aatgagddea tgfvvelsrs g
//
LOCUS       WP_235865124             447 aa            linear   BCT 02-MAR-2025
DEFINITION  thioesterase domain-containing protein, partial [Streptomyces
            cacaoi].
ACCESSION   WP_235865124
VERSION     WP_235865124.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces cacaoi
  ORGANISM  Streptomyces cacaoi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 447)
  AUTHORS   Schneider,A. and Marahiel,M.A.
  TITLE     Genetic evidence for a role of thioesterase domains, integrated in
            or associated with peptide synthetases, in non-ribosomal peptide
            biosynthesis in Bacillus subtilis
  JOURNAL   Arch Microbiol 169 (5), 404-410 (1998)
   PUBMED   9560421
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013166.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00975.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Streptomyces cacaoi"
                     /db_xref="taxon:1898"
     Protein         <1..447
                     /product="thioesterase domain-containing protein"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <2..410
                     /region_name="entF"
                     /note="enterobactin non-ribosomal peptide synthetase EntF;
                     PRK10252"
                     /db_xref="CDD:236668"
ORIGIN      
        1 elaarlpdym vpavvmvvad fpltvngkld kralpepeft ggvyrapssp deeilaalfa
       61 rvlglprvgv ddsffdlggn slsamrviaa vretfdsaig vralleaptv rglgrqlhsw
      121 sdadeitela rltqgpgepl fcvhpgggvg wsyralgtvl krpvvgiqqt tgtderpgsv
      181 remaehyadl vqsvqregpy dllgwsfggl vahqvavale rrgarvrrlv lldaaiagpg
      241 vdrsaeeefd eadvlryfvs rqaeqpeqae raeqaeqarq pepgeqagqa geagetgqag
      301 qvagdgiver vgsrvatgav vppawlirhv vhnlrfntrl whghtpavfs gdavvfkaaa
      361 trmdagysdd wtpfvagsve ehtvdcahnd ilspavldty gdrlkaamdp mdpmdrmrtt
      421 dpthttdsts pmnpmdangr gfrpsgr
//
LOCUS       WP_235865106              70 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleoside hydrolase, partial [Streptomyces cacaoi].
ACCESSION   WP_235865106
VERSION     WP_235865106.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces cacaoi
  ORGANISM  Streptomyces cacaoi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 70)
  AUTHORS   Degano,M., Gopaul,D.N., Scapin,G., Schramm,V.L. and
            Sacchettini,J.C.
  TITLE     Three-dimensional structure of the inosine-uridine nucleoside
            N-ribohydrolase from Crithidia fasciculata
  JOURNAL   Biochemistry 35 (19), 5971-5981 (1996)
   PUBMED   8634238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01156.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Streptomyces cacaoi"
                     /db_xref="taxon:1898"
     Protein         1..>70
                     /product="nucleoside hydrolase"
                     /GO_function="GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA]"
     Region          2..>68
                     /region_name="URH1"
                     /note="Inosine-uridine nucleoside N-ribohydrolase
                     [Nucleotide transport and metabolism]; COG1957"
                     /db_xref="CDD:441560"
ORIGIN      
        1 mmdcdtgidd alallylclt pgtdlravtt vagntgaers alntlqvlet vgrtdipvaa
       61 gaetaltgav
//
LOCUS       WP_235865160              74 aa            linear   BCT 02-MAR-2025
DEFINITION  protein kinase domain-containing protein, partial [Streptomyces
            cacaoi].
ACCESSION   WP_235865160
VERSION     WP_235865160.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces cacaoi
  ORGANISM  Streptomyces cacaoi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 74)
  AUTHORS   Hunter,T. and Plowman,G.D.
  TITLE     The protein kinases of budding yeast: six score and more
  JOURNAL   Trends Biochem Sci 22 (1), 18-22 (1997)
   PUBMED   9020587
REFERENCE   2  (residues 1 to 74)
  AUTHORS   Hanks,S.K. and Hunter,T.
  TITLE     Protein kinases 6. The eukaryotic protein kinase superfamily:
            kinase (catalytic) domain structure and classification
  JOURNAL   FASEB J 9 (8), 576-596 (1995)
   PUBMED   7768349
REFERENCE   3  (residues 1 to 74)
  AUTHORS   Hanks,S.K. and Quinn,A.M.
  TITLE     Protein kinase catalytic domain sequence database: identification
            of conserved features of primary structure and classification of
            family members
  JOURNAL   Methods Enzymol 200, 38-62 (1991)
   PUBMED   1956325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00069.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Streptomyces cacaoi"
                     /db_xref="taxon:1898"
     Protein         <1..>74
                     /product="protein kinase domain-containing protein"
                     /GO_function="GO:0004672 - protein kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006468 - protein phosphorylation
                     [Evidence IEA]"
     Region          <1..73
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 akltgtgvam gtphymspeq iagaavdhrs dlysfgcvly eiatgappfe gddawtvlvg
       61 hrdtapappr ehra
//
LOCUS       WP_235865168             141 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Streptomyces cacaoi].
ACCESSION   WP_235865168
VERSION     WP_235865168.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces cacaoi
  ORGANISM  Streptomyces cacaoi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Streptomyces cacaoi"
                     /db_xref="taxon:1898"
     Protein         <1..141
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <1..131
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 atelvreprv aavpahgela arhealtlad laphpvalnt vsglttlglw ppeirpdada
       61 avrvantddw lgaiaaggav gvstqatael hphpgvayrp ltvpgdtgvp vslvwrdmpg
      121 hpaipdlvta arqvlsargt a
//
LOCUS       WP_235865178              50 aa            linear   BCT 02-MAR-2025
DEFINITION  SNF2-related protein, partial [Streptomyces cacaoi].
ACCESSION   WP_235865178
VERSION     WP_235865178.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces cacaoi
  ORGANISM  Streptomyces cacaoi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 50)
  AUTHORS   Rowbotham,S.P., Barki,L., Neves-Costa,A., Santos,F., Dean,W.,
            Hawkes,N., Choudhary,P., Will,W.R., Webster,J., Oxley,D.,
            Green,C.M., Varga-Weisz,P. and Mermoud,J.E.
  TITLE     Maintenance of silent chromatin through replication requires
            SWI/SNF-like chromatin remodeler SMARCAD1
  JOURNAL   Mol Cell 42 (3), 285-296 (2011)
   PUBMED   21549307
REFERENCE   2  (residues 1 to 50)
  AUTHORS   Linder,B., Cabot,R.A., Schwickert,T. and Rupp,R.A.
  TITLE     The SNF2 domain protein family in higher vertebrates displays
            dynamic expression patterns in Xenopus laevis embryos
  JOURNAL   Gene 326, 59-66 (2004)
   PUBMED   14729263
REFERENCE   3  (residues 1 to 50)
  AUTHORS   Eisen,J.A., Sweder,K.S. and Hanawalt,P.C.
  TITLE     Evolution of the SNF2 family of proteins: subfamilies with distinct
            sequences and functions
  JOURNAL   Nucleic Acids Res 23 (14), 2715-2723 (1995)
   PUBMED   7651832
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012403.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00176.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..50
                     /organism="Streptomyces cacaoi"
                     /db_xref="taxon:1898"
     Protein         <1..>50
                     /product="SNF2-related protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0140658 - ATP-dependent chromatin
                     remodeler activity [Evidence IEA]"
     Region          <5..>50
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
ORIGIN      
        1 sgeggdggvv lttygtlrss aaelaevewg lvvadeaqhv knsrsatara
//
LOCUS       WP_235865214              93 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5954 family protein, partial [Streptomyces cacaoi].
ACCESSION   WP_235865214
VERSION     WP_235865214.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces cacaoi
  ORGANISM  Streptomyces cacaoi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039603.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19379.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Streptomyces cacaoi"
                     /db_xref="taxon:1898"
     Protein         <1..93
                     /product="DUF5954 family protein"
     Region          <2..23
                     /region_name="DUF5954"
                     /note="Family of unknown function (DUF5954); pfam19379"
                     /db_xref="CDD:466061"
ORIGIN      
        1 tgrhmrivrv erfirigpdg pegprppdpd pdppilvqdq qlretgelpp dnentepdlp
       61 pditarhkel frlsiqeker qekltqtrqq rqn
//
LOCUS       WP_235865227             254 aa            linear   BCT 02-MAR-2025
DEFINITION  lycopene cyclase family protein, partial [Streptomyces cacaoi].
ACCESSION   WP_235865227
VERSION     WP_235865227.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces cacaoi
  ORGANISM  Streptomyces cacaoi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 254)
  AUTHORS   Cunningham,F.X. Jr. and Gantt,E.
  TITLE     One ring or two? Determination of ring number in carotenoids by
            lycopene epsilon-cyclases
  JOURNAL   Proc Natl Acad Sci U S A 98 (5), 2905-2910 (2001)
   PUBMED   11226339
REFERENCE   2  (residues 1 to 254)
  AUTHORS   Cunningham,F.X. Jr., Pogson,B., Sun,Z., McDonald,K.A.,
            DellaPenna,D. and Gantt,E.
  TITLE     Functional analysis of the beta and epsilon lycopene cyclase
            enzymes of Arabidopsis reveals a mechanism for control of cyclic
            carotenoid formation
  JOURNAL   Plant Cell 8 (9), 1613-1626 (1996)
   PUBMED   8837512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017634.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05834.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Streptomyces cacaoi"
                     /db_xref="taxon:1898"
     Protein         <1..254
                     /product="lycopene cyclase family protein"
     Region          <2..194
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 qrgarpahgl sfgyvlptgp ctalveytef srrllddaay eealghycre vlrlggftvr
       61 aretgvipmt dapfvrragp avfrigtagg atrpstgytf atiqrqslal aravragrsp
      121 vpprphpara ramdavllra ldsgridgpe ffvrlfrrvp pgrllrfldg rstlaeelai
      181 garvpvlpml hcaaelpllp rrtppgprip trprhgipeg pegpegsgvp agptgpegpe
      241 dcqtpevpap qeel
//
LOCUS       WP_235865241             229 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein, partial [Streptomyces
            cacaoi].
ACCESSION   WP_235865241
VERSION     WP_235865241.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces cacaoi
  ORGANISM  Streptomyces cacaoi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Streptomyces cacaoi"
                     /db_xref="taxon:1898"
     Protein         <1..229
                     /product="extracellular solute-binding protein"
     Region          <3..221
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 agdedtvwrl wpmiwdlggd vigddgrsvg fdrqgeralq vvealardrs vyidpksgse
       61 qmyqvflsgr iamvvtgpwq lpdirqadvd yhvaplpsfs grpltisgpd twtvfdngpa
      121 rvraartfvn wlarpaqdvr wgveagslpl srkaealprw qretrhtegl atftealasa
      181 rvrpahpayp eisqalaqai tsvllgrssp rsalracvee anaallipr
//
LOCUS       WP_235865248             148 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase, partial [Streptomyces cacaoi].
ACCESSION   WP_235865248
VERSION     WP_235865248.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces cacaoi
  ORGANISM  Streptomyces cacaoi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 148)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 148)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Streptomyces cacaoi"
                     /db_xref="taxon:1898"
     Protein         <1..148
                     /product="aldo/keto reductase"
     Region          <1..>148
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
ORIGIN      
        1 rdnreslvpa tkyttlrrpg dpnsggphrk npfaaveagl rrlntdyldl lhphvgdftt
       61 pveeiprgrd dlvrqgkvlc vaisnaparq vsrmqaiadl rgwsplvalr teynlaertg
      121 erdlipmare tgrgvvpysp lagglltg
//
LOCUS       WP_235865031            2301 aa            linear   BCT 02-MAR-2025
DEFINITION  TcdA/TcdB pore-forming domain-containing protein [Pseudomonas
            frederiksbergensis].
ACCESSION   WP_235865031
VERSION     WP_235865031.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas frederiksbergensis
  ORGANISM  Pseudomonas frederiksbergensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 2301)
  AUTHORS   Barth,H., Pfeifer,G., Hofmann,F., Maier,E., Benz,R. and Aktories,K.
  TITLE     Low pH-induced formation of ion channels by clostridium difficile
            toxin B in target cells
  JOURNAL   J Biol Chem 276 (14), 10670-10676 (2001)
   PUBMED   11152463
REFERENCE   2  (residues 1 to 2301)
  AUTHORS   Qa'Dan,M., Spyres,L.M. and Ballard,J.D.
  TITLE     pH-induced conformational changes in Clostridium difficile toxin B
  JOURNAL   Infect Immun 68 (5), 2470-2474 (2000)
   PUBMED   10768933
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024322.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12920.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2301
                     /organism="Pseudomonas frederiksbergensis"
                     /db_xref="taxon:104087"
     Protein         1..2301
                     /product="TcdA/TcdB pore-forming domain-containing
                     protein"
                     /calculated_mol_wt=253144
     Region          69..456
                     /region_name="Gly_transf_sug"
                     /note="Glycosyltransferase sugar-binding region containing
                     DXD motif; cl19952"
                     /db_xref="CDD:418730"
     Region          773..949
                     /region_name="C58_PaToxP-like"
                     /note="peptidase C58 domain of Photorhabdus asymbiotica
                     toxin PaTox and LifA/Efa1-related large cytotoxin, and
                     similar proteins; cd20495"
                     /db_xref="CDD:410776"
     Site            order(793..796,843,881..883)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:410776"
     Region          1012..1628
                     /region_name="TcdA_TcdB_pore"
                     /note="TcdA/TcdB pore forming domain; pfam12920"
                     /db_xref="CDD:463749"
ORIGIN      
        1 mleplgllkq alaslvgpeg rqrrtteslp pqspapdmvd iyerlegfea rlsngaqqlq
       61 tpktnvpdnl hfvwlggglg diqrdyiniw kqtlagqgyt lklwydsdal lahetnriiv
      121 eaakadamln ggqttsdafe ladkyeerai alkqqmfahi nkavesgesa dnaridllvr
      181 aysqdearlk vlreknrqsl lslgeggivl rdlateatpl ylqdiyarei slrgnfaaas
      241 divrvealfa dggsyadvdn lpplletlgg vdisrfelda rlgvlqlild hspewmpgrq
      301 virskyknyf eriplehrea lerfakskpd lasvfrrpve rqvrpdglra vaerssfsna
      361 flmahpgsam lkavldrfrl nyevvdatar laverkiali dvravadvan evaekrfgpl
      421 helpniehmt vsflvdavag yysdgirpqi emtiyltgpa avrdgladye kmhftprgae
      481 asraevlipa iatvnratee eqdhswkene sdtaqwlnre klhweagkfk tryagdvaql
      541 lkyqsidfda gwpviegrhv litdllqqla ddlgepfrqa mrqrqngsvt fekplslsfd
      601 drqaiiaqdv rshpltppad aatqnlsvde llsqtakdpf ismklnplqy lllggllgvn
      661 tldkkhfaaa satlenlans msdmgvihry gaierelfkq shpaflaglk gasnpsvals
      721 etsvdlkkqa larpltllew grsvariqhv akleyrdrvi ertgevlgsf kdntfkiapq
      781 dlllkgagdr vagrcyplal amaaalhksn taantlrarf fltvinseda dskafvsmie
      841 elrdapvndi gnplmrsdla qvvaileekt asttlmlnsd nhsmlvakif egersnylfy
      901 dpnlgtyeig tslafrdalt dfflrkemam hyaafgdaqr ptfdlieldg eklnsrvlas
      961 gievsslses galpeqtvpr vrqrlasarg rslvnnaalg sslleldahw wggqiaqatr
     1021 qlqeqhglas dsvalfetle itptggfeis vlnpvsektv rvttsdhrfl rikeflsdtf
     1081 hslaarpras vspldpteag svhtlnagft vqalmnalrh hegaasgsdk alttairlha
     1141 yvnyaqlahg nivdvlgvvn lvrqalndek liartsaplv qkalghiane gvgtvlglvn
     1201 vgfdiyqlsh atndieraqf gtqlafdsvs avvgvaglga alagagtvaa vlggggvilg
     1261 glavgitala egfatiaeea kevalffdgl ekaylqggyh ldkasnawia hpllvfadld
     1321 lrasivhfds pklfplrdhf gvpdfdvdyd ratdirqglg lpdsarfspq agqtivlpct
     1381 pktwyayeyk llpfvtfrha dgydtarrle kkneqgqwqf lfsfysfpge yvvnrlnpvy
     1441 kptvfnvrld nverslavpa lpkmwhglvs yrvegagaqc svllnpgvrl elaapgqiam
     1501 qwvlltpwlv eadirieagg rlvsgtldvt fsgsgvhhvl lkladnkilr vdlaalrlev
     1561 veevadpalg eqalldhfks lasehrlamp ytpvhnfvvp yekpdeprav vayydsaqdr
     1621 flyirdpqvl lsdevvlgav legsayfyhp ddfyvwqvna itgtlvqryr llyrtgvaiv
     1681 rfeavanggi qivqrlagkd drqdeltyvi hdrsvllssi trgqdpalqs lleadmltdw
     1741 khvlgdyhlp lestntvnwr paalvsicwq idaelrdlvw vrsgdgliir aparrhrarg
     1801 wadsikalsd lvliapagae gevfvtydkl hqglmcqqrl mvdgraqwss snisppglkn
     1861 vvaverdylv ltdaglffdi aphgnlrfgg ltehwlkdks qwwlalatva lhhpvpsfai
     1921 lglsgfkgda lcawyldgrl llaemgqgke vrllsitpdn qaswlfdlst gkivrqgfid
     1981 pehlstafaq gtklltpaal paatqewasw tfsdvtvega glrattlegv evdlqynapa
     2041 ritgvdshwv avlegelseg laalanehrc adflsvedpd yqqwyvvrtg rliripktav
     2101 aaqftlvgtq hqtnvmlhdr gdgflhtypq nsrvgpldyv qrnaevlvvd gpktgsdllp
     2161 liaddvsilv lkmgegsttc rltraawlkl qsvivdcrps ldhspsdpgk liwdivvvdq
     2221 lwasrvdehl vivdadsghs lifrdvfstd vvlqrnvflt msgyqsfavs tlvsalvrng
     2281 stssvllkdi lptaiietie g
//
LOCUS       WP_235865557             332 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Pseudomonas
            marginalis].
ACCESSION   WP_235865557
VERSION     WP_235865557.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas marginalis
  ORGANISM  Pseudomonas marginalis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 332)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Pseudomonas marginalis"
                     /db_xref="taxon:298"
     Protein         1..332
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=37026
     Region          33..326
                     /region_name="PRK11139"
                     /note="DNA-binding transcriptional activator GcvA;
                     Provisional"
                     /db_xref="CDD:182990"
ORIGIN      
        1 mtwkstykti fryasvtknq akpitsfklg tlmrrkipss talmafevaa rhgsfaraae
       61 elsltegais rqigrleafl gvtlfervgn rvrllpnger yavqvresld rldrdsqylm
      121 gqpndgasld iatiptfamr wliprlgrfq qkhpnitvhl aermepfvla gsgfdaaihf
      181 ehpawtgmrt hellhevlvp vchpelltgr nrttaldelp rlhrrqnpea wqhyaqetgs
      241 pltnpaigar fdlhgmliea alaglgvalv prlyvetela sgsliapwpe gktisktfcl
      301 ilpepiglgr epiqafaqwl ldeakkrttv qp
//
LOCUS       WP_235865167              97 aa            linear   BCT 02-MAR-2025
DEFINITION  protease inhibitor I9 family protein, partial [Streptomyces
            cacaoi].
ACCESSION   WP_235865167
VERSION     WP_235865167.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces cacaoi
  ORGANISM  Streptomyces cacaoi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 97)
  AUTHORS   Kojima,S., Minagawa,T. and Miura,K.
  TITLE     The propeptide of subtilisin BPN' as a temporary inhibitor and
            effect of an amino acid replacement on its inhibitory activity
  JOURNAL   FEBS Lett 411 (1), 128-132 (1997)
   PUBMED   9247157
REFERENCE   2  (residues 1 to 97)
  AUTHORS   Li,Y., Hu,Z., Jordan,F. and Inouye,M.
  TITLE     Functional analysis of the propeptide of subtilisin E as an
            intramolecular chaperone for protein folding. Refolding and
            inhibitory abilities of propeptide mutants
  JOURNAL   J Biol Chem 270 (42), 25127-25132 (1995)
   PUBMED   7559646
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017709.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05922.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Streptomyces cacaoi"
                     /db_xref="taxon:1898"
     Protein         <1..>97
                     /product="protease inhibitor I9 family protein"
     Region          <3..35
                     /region_name="Inhibitor_I9"
                     /note="Peptidase inhibitor I9; pfam05922"
                     /db_xref="CDD:428674"
     Region          50..>97
                     /region_name="Peptidases_S8_S53"
                     /note="Peptidase domain in the S8 and S53 families;
                     cl10459"
                     /db_xref="CDD:415849"
ORIGIN      
        1 dqvysaafrg fslraseeqa eelakapgvr fveadgtarv sgtqpnppsw gidridgaln
       61 ssysypndgs gvtayivdtg vdmthpdfgg rarsgrd
//
LOCUS       WP_235865616             210 aa            linear   BCT 02-MAR-2025
DEFINITION  antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein
            [Pseudomonas marginalis].
ACCESSION   WP_235865616
VERSION     WP_235865616.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas marginalis
  ORGANISM  Pseudomonas marginalis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 210)
  AUTHORS   Zhang,S.P., Feng,H.Z., Wang,Q., Kempher,M.L., Quan,S.W., Tao,X.,
            Niu,S., Wang,Y., Feng,H.Y. and He,Y.X.
  TITLE     Bacterial type II toxin-antitoxin systems acting through
            post-translational modifications
  JOURNAL   Comput Struct Biotechnol J 19, 86-93 (2020)
   PUBMED   33384857
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 210)
  AUTHORS   Freire,D.M., Gutierrez,C., Garza-Garcia,A., Grabowska,A.D.,
            Sala,A.J., Ariyachaokun,K., Panikova,T., Beckham,K.S.H., Colom,A.,
            Pogenberg,V., Cianci,M., Tuukkanen,A., Boudehen,Y.M., Peixoto,A.,
            Botella,L., Svergun,D.I., Schnappinger,D., Schneider,T.R.,
            Genevaux,P., de Carvalho,L.P.S., Wilmanns,M., Parret,A.H.A. and
            Neyrolles,O.
  TITLE     An NAD+ Phosphorylase Toxin Triggers Mycobacterium tuberculosis
            Cell Death
  JOURNAL   Mol Cell 73 (6), 1282-1291 (2019)
   PUBMED   30792174
REFERENCE   3  (residues 1 to 210)
  AUTHORS   Piscotta,F.J., Jeffrey,P.D. and Link,A.J.
  TITLE     ParST is a widespread toxin-antitoxin module that targets
            nucleotide metabolism
  JOURNAL   Proc Natl Acad Sci U S A 116 (3), 826-834 (2019)
   PUBMED   30598453
REFERENCE   4  (residues 1 to 210)
  AUTHORS   Skjerning,R.B., Senissar,M., Winther,K.S., Gerdes,K. and
            Brodersen,D.E.
  TITLE     The RES domain toxins of RES-Xre toxin-antitoxin modules induce
            cell stasis by degrading NAD+
  JOURNAL   Mol Microbiol 111 (1), 221-236 (2019)
   PUBMED   30315706
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021255.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09722.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Pseudomonas marginalis"
                     /db_xref="taxon:298"
     Protein         1..210
                     /product="antitoxin Xre/MbcA/ParS toxin-binding
                     domain-containing protein"
                     /calculated_mol_wt=22959
     Region          23..77
                     /region_name="MazE"
                     /note="Antitoxin component MazE of the MazEF
                     toxin-antitoxin module [Defense mechanisms]; COG2336"
                     /db_xref="CDD:441907"
     Region          81..207
                     /region_name="COG5642"
                     /note="Uncharacterized conserved protein, DUF2384 family
                     [Function unknown]"
                     /db_xref="CDD:444366"
ORIGIN      
        1 mserwivkch ntedgtgdii idlppelldq mglgvgddle ltvadgtlvl tpmdnaasvr
       61 pmfagvlrhd ayhayrtrle allhisvnas dldihdmiva gfsaslikvl cddgtisdee
      121 rdriiqpkal ktklaanqll tlhesdhlfr fghitamaev ifgdkgkakq wlskpkarfl
      181 gespsamvtt shgthlveem liqvsegmsf
//
LOCUS       WP_235865665             123 aa            linear   BCT 02-MAR-2025
DEFINITION  recombinase family protein [Sarcina ventriculi].
ACCESSION   WP_235865665
VERSION     WP_235865665.1
KEYWORDS    RefSeq.
SOURCE      Sarcina ventriculi
  ORGANISM  Sarcina ventriculi
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Sarcina.
REFERENCE   1  (residues 1 to 123)
  AUTHORS   Yang,W. and Steitz,T.A.
  TITLE     Crystal structure of the site-specific recombinase gamma delta
            resolvase complexed with a 34 bp cleavage site
  JOURNAL   Cell 82 (2), 193-207 (1995)
   PUBMED   7628011
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012464.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00239.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Sarcina ventriculi"
                     /db_xref="taxon:1267"
     Protein         1..123
                     /product="recombinase family protein"
                     /GO_function="GO:0000150 - DNA strand exchange activity
                     [Evidence IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /calculated_mol_wt=14100
     Region          1..111
                     /region_name="Ser_Recombinase"
                     /note="Serine Recombinase family, catalytic domain; a DNA
                     binding domain may be present either N- or C-terminal to
                     the catalytic domain. These enzymes perform site-specific
                     recombination of DNA molecules by a concerted, four-strand
                     cleavage and rejoining...; cl02788"
                     /db_xref="CDD:445923"
     Site            order(2,4,69..70,73)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239737"
     Site            4
                     /site_type="active"
                     /note="catalytic nucleophile [active]"
                     /db_xref="CDD:239737"
ORIGIN      
        1 mristkesnd kqsfsrqeks lktyakdnni eyllsfkddt tggtfnrpsw sklekilqkg
       61 dtivfkeisr ftrqaeegye kykelmdkgi nlvfldnltv stdyiknlts iannqnlvtk
      121 tal
//
LOCUS       WP_235865718              67 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF3389 family protein [Vibrio].
ACCESSION   WP_235865718
VERSION     WP_235865718.1
KEYWORDS    RefSeq.
SOURCE      Vibrio
  ORGANISM  Vibrio
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023297.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11869.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Vibrio"
                     /db_xref="taxon:662"
     Protein         1..67
                     /product="DUF3389 family protein"
                     /calculated_mol_wt=7073
     Region          2..66
                     /region_name="DUF3389"
                     /note="Protein of unknown function (DUF3389); pfam11869"
                     /db_xref="CDD:432146"
ORIGIN      
        1 mvtphevvvr lghenrvtlq aqaeaislmg kganvmiang seskwsvkld deeqlsaiaq
       61 tlgcdll
//
LOCUS       WP_235865732             150 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: Ig-like domain-containing protein [Vibrio].
ACCESSION   WP_235865732
VERSION     WP_235865732.1
KEYWORDS    RefSeq.
SOURCE      Vibrio
  ORGANISM  Vibrio
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae.
REFERENCE   1  (residues 1 to 150)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Vibrio"
                     /db_xref="taxon:662"
     Protein         1..150
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=16357
ORIGIN      
        1 mrlkkffqll taalvtsvll igyksgfhed lngnkeigan kdtvqpitld mvsinsnkrt
       61 valgeslkly atayfsdnkh etvtelvews iegdknisid kmtgkvttlr egvavvsayl
      121 dgmesktisi kvtapeltdi avtvqqkayl
//
LOCUS       WP_235865765             118 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF3319 domain-containing protein [Photobacterium].
ACCESSION   WP_235865765
VERSION     WP_235865765.1
KEYWORDS    RefSeq.
SOURCE      Photobacterium
  ORGANISM  Photobacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023210.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11782.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Photobacterium"
                     /db_xref="taxon:657"
     Protein         1..118
                     /product="DUF3319 domain-containing protein"
                     /calculated_mol_wt=13406
     Region          3..92
                     /region_name="DUF3319"
                     /note="Protein of unknown function (DUF3319); pfam11782"
                     /db_xref="CDD:432071"
ORIGIN      
        1 mtikkrlfhr gytienstgl tsdwktting qtvkgmitni kksvdwwcdt kafvppekfn
       61 thpqvrqstv iakseqyrgi vlkndsgkan ewyvmvrgql vkgdivsikk yldrtlta
//
LOCUS       WP_235865800             691 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma 54-interacting transcriptional regulator [Photobacterium
            piscicola].
ACCESSION   WP_235865800
VERSION     WP_235865800.1
KEYWORDS    RefSeq.
SOURCE      Photobacterium piscicola
  ORGANISM  Photobacterium piscicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
REFERENCE   1  (residues 1 to 691)
  AUTHORS   Studholme,D.J. and Dixon,R.
  TITLE     Domain architectures of sigma54-dependent transcriptional
            activators
  JOURNAL   J Bacteriol 185 (6), 1757-1767 (2003)
   PUBMED   12618438
REFERENCE   2  (residues 1 to 691)
  AUTHORS   Chaney,M., Grande,R., Wigneshweraraj,S.R., Cannon,W., Casaz,P.,
            Gallegos,M.T., Schumacher,J., Jones,S., Elderkin,S., Dago,A.E.,
            Morett,E. and Buck,M.
  TITLE     Binding of transcriptional activators to sigma 54 in the presence
            of the transition state analog ADP-aluminum fluoride: insights into
            activator mechanochemical action
  JOURNAL   Genes Dev 15 (17), 2282-2294 (2001)
   PUBMED   11544185
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00158.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Photobacterium piscicola"
                     /db_xref="taxon:1378299"
     Protein         1..691
                     /product="sigma 54-interacting transcriptional regulator"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008134 - transcription factor binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=78225
     Region          38..683
                     /region_name="PRK15429"
                     /note="formate hydrogenlyase transcriptional activator
                     FlhA"
                     /db_xref="CDD:237965"
ORIGIN      
        1 menfesdlmi fskallsind isgvinflnn erllfidadr vniilkddis aqsilyyqna
       61 dkefqrydys edslslhhvv sceyshying eelyrtfpql slhpaytniq tyckipllia
      121 nqqlgaieyi nlrlpnhddv ekqfklfnnm vaamiehile hqiassltqq lsnehkdfqf
      181 lvditnavin qsskkeligs llhflyqrfg mnelsiiqsq dghynqysgg dvdingemdy
      241 qchfftddsm iknavqnnqa viltaadiyk lnhddnspyf ssqaksacii pmifrgltig
      301 yicyvkavet qfqqteielf kqisarvala ihsikvhqsa tphrpqtkfi sieesydeha
      361 ifddiisqse vmnkvleqva lvascdstvl ilgesgtgke liaraihkms hrsktdmvkm
      421 ncaaipsglf eselfgherg aftgavtqrv grfeqahkgt lfldeigdmp lelqpkllrv
      481 lqeneiervg knqlisidvr ivvatnvnll dmvqqkqfrn dlyyrlnvfp ieipplrera
      541 edipllvkhf trelakkmgk nitsiavedm himqqfswpg nvrelrnvie rsviltrghv
      601 lnvptqelvs spsmltltpv epviqdvvlp advklpspmi dkqmivdali hcggviagpn
      661 gaanqlglkr ttllsrmqkm glnsqdfrli n
//
LOCUS       WP_235865822             691 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing
            protein [Pseudovibrio exalbescens].
ACCESSION   WP_235865822
VERSION     WP_235865822.1
KEYWORDS    RefSeq.
SOURCE      Pseudovibrio exalbescens
  ORGANISM  Pseudovibrio exalbescens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Pseudovibrio.
REFERENCE   1  (residues 1 to 691)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02737.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Pseudovibrio exalbescens"
                     /db_xref="taxon:197461"
     Protein         1..691
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /GO_function="GO:0070403 - NAD+ binding [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=74580
     Region          17..687
                     /region_name="fadJ"
                     /note="fatty acid oxidation complex subunit alpha FadJ;
                     PRK11154"
                     /db_xref="CDD:236864"
ORIGIN      
        1 mttkdvmpvs ikmhesiavv qidhppvnal shavrtgllq avetvnatpe iaavvlvcag
       61 rtfiagadvr efnqpareph lpdvidaiev cskpwvaalh gnalggglev algchyrial
      121 ssarmglpev tlglipgagg tvrlprlipv pqavemitgg kpisakeaas lglvdqivdd
      181 elenaaiafa qtrtsqplvs trdrsikdap tepdfwshak srlerkargq isplyaleav
      241 knavtlafed ayakerscfl elrqsdqasa lrhaffaera vgrldsledv qsraldaagv
      301 igggtmgagi aaalllagir vtlverdeds lkagvsrvas ileasvkrgl ltpdrqreli
      361 etlgqtttye dlanvdlaie avfesmpvkq evfkrldqvl kpgailatnt syldvnaiar
      421 atqrptdvig lhffspahim klleiveada tapdvlatgf elarklrkvg vrsgvcdgfi
      481 gnrilkiyrq naerlllegg tpaqvdsamr rfgmpmgpfe mqdlagldia aaqrhaarek
      541 ginvfapvsd rlcekkrfgq kcnagwyrye dnsrtpledd evlklireea sqhhvahkah
      601 ddnsiqrail fpmineacfi ldegiatrpl eidmveihgy gfprwrgglm hyadtigast
      661 lldalgadqa tepapliksl aktggtfadl n
//
LOCUS       WP_235865849             352 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3080 family protein [Photobacterium piscicola].
ACCESSION   WP_235865849
VERSION     WP_235865849.1
KEYWORDS    RefSeq.
SOURCE      Photobacterium piscicola
  ORGANISM  Photobacterium piscicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022723.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11279.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Photobacterium piscicola"
                     /db_xref="taxon:1378299"
     Protein         1..352
                     /product="DUF3080 family protein"
                     /calculated_mol_wt=41157
     Region          27..349
                     /region_name="DUF3080"
                     /note="Protein of unknown function (DUF3080); pfam11279"
                     /db_xref="CDD:431778"
ORIGIN      
        1 mkkllllaii glfsvigckk nttdtllnty qqrltnildv eadtippldi psyprthvlk
       61 qpiaditigl lnayelrqcg lfqliaerns ilgkvqdktr rlhyellllk qiehclniln
      121 sadplqlqlk niyhqkqqql pqaiwnmift gqewrqqftl ghqllssqqf ggyienlaaf
      181 eyvdtltttm lssqttkhsl ttnnidqllh hqqqihntqy igqlfysiar ittimntitt
      241 qlithdqtvm cgkninqqqa qylrnvfyky yindiqpyis klhsqyqqlr phlnniyaml
      301 vqqqitppta mavyaryyfq gellyqfqqa thdhvrywqr lfkrcqfkvg hq
//
LOCUS       WP_235866008             196 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3515 family protein [Serinibacter arcticus].
ACCESSION   WP_235866008
VERSION     WP_235866008.1
KEYWORDS    RefSeq.
SOURCE      Serinibacter arcticus
  ORGANISM  Serinibacter arcticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Beutenbergiaceae; Serinibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023453.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12028.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Serinibacter arcticus"
                     /db_xref="taxon:1655435"
     Protein         1..196
                     /product="DUF3515 family protein"
                     /calculated_mol_wt=20146
     Region          30..181
                     /region_name="DUF3515"
                     /note="Protein of unknown function (DUF3515); pfam12028"
                     /db_xref="CDD:432272"
ORIGIN      
        1 mpkllppavl rrvppvpvrp atgarahrsa glllvvaatv vlggcardvp lepapsasdp
       61 vcaevmrsap ivlagaerra tnsqaslawg dpaitlrcgv tpppptderc iavtaadgts
      121 idwivaendd vvgtgpdadt ergrfrftty grepaieviv pveyagteat allvdlgpav
      181 altdaprtcl dlsdvs
//
LOCUS       WP_235866022             292 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Serinibacter
            arcticus].
ACCESSION   WP_235866022
VERSION     WP_235866022.1
KEYWORDS    RefSeq.
SOURCE      Serinibacter arcticus
  ORGANISM  Serinibacter arcticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Beutenbergiaceae; Serinibacter.
REFERENCE   1  (residues 1 to 292)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 292)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 292)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 292)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Serinibacter arcticus"
                     /db_xref="taxon:1655435"
     Protein         1..292
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=30285
     Region          2..203
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            31..38
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213179"
     Site            order(34..35,37..39,77,149..150,182)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:213179"
     Site            74..77
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213179"
     Site            125..134
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213179"
     Site            145..150
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213179"
     Site            153..156
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213179"
     Region          <172..283
                     /region_name="E3_UFM1_ligase"
                     /note="E3 UFM1-protein ligase 1; cl10727"
                     /db_xref="CDD:472006"
     Site            178..184
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213179"
ORIGIN      
        1 mqglrktfgd vtavedlsfa vqpgrvtgfl gpngsgkttt lrillglvqa tsgaatiggr
       61 ayrdipdplr tvgaaleaas fhpgrtarsh lriqalangi drgrvqtvld mvgmteyadr
      121 rvggysmgmr qrlglagall gdpgvlvlde pvngldpegi rwirsflral aeqgrtvvvs
      181 shmlgevqqs vddvviiaqg rlvragtias leaenppqvl vdaadrdala rsltaaglaf
      241 vagpdgfrva tadpglvghv tfaagvelrt lqrlstgled tflaltgtga aa
//
LOCUS       WP_235866107             116 aa            linear   BCT 02-MAR-2025
DEFINITION  GMC oxidoreductase [Vibrio paracholerae].
ACCESSION   WP_235866107
VERSION     WP_235866107.1
KEYWORDS    RefSeq.
SOURCE      Vibrio paracholerae
  ORGANISM  Vibrio paracholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05199.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Vibrio paracholerae"
                     /db_xref="taxon:650003"
     Protein         1..116
                     /product="GMC oxidoreductase"
                     /GO_function="GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /calculated_mol_wt=12369
ORIGIN      
        1 mahkpqvsai irqhaetafh pscsckmged dmsvvdgegr vhgvqklrvv dasimpiiit
       61 gnlnattimm aekiadkirg rtplprstaa yyqangvptr tepvravvdl ssaima
//
LOCUS       WP_235866145             103 aa            linear   BCT 02-MAR-2025
DEFINITION  TadE/TadG family type IV pilus assembly protein [Serinibacter
            arcticus].
ACCESSION   WP_235866145
VERSION     WP_235866145.1
KEYWORDS    RefSeq.
SOURCE      Serinibacter arcticus
  ORGANISM  Serinibacter arcticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Beutenbergiaceae; Serinibacter.
REFERENCE   1  (residues 1 to 103)
  AUTHORS   Kachlany,S.C., Planet,P.J., DeSalle,R., Fine,D.H. and Figurski,D.H.
  TITLE     Genes for tight adherence of Actinobacillus actinomycetemcomitans:
            from plaque to plague to pond scum
  JOURNAL   Trends Microbiol 9 (9), 429-437 (2001)
   PUBMED   11553455
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019428.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07811.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Serinibacter arcticus"
                     /db_xref="taxon:1655435"
     Protein         1..103
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /calculated_mol_wt=10388
ORIGIN      
        1 mlvlglvqla yalwvrtvli daagegarya alldgdlgsg eqralqvaas gvtdgyvdhv
       61 dasvtseagy dvivvelrap vpvigllgpt gtlsvagrav veq
//
LOCUS       WP_235866150             164 aa            linear   BCT 02-MAR-2025
DEFINITION  dihydrofolate reductase [Serinibacter arcticus].
ACCESSION   WP_235866150
VERSION     WP_235866150.1
KEYWORDS    RefSeq.
SOURCE      Serinibacter arcticus
  ORGANISM  Serinibacter arcticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Beutenbergiaceae; Serinibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012413.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00186.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Serinibacter arcticus"
                     /db_xref="taxon:1655435"
     Protein         1..164
                     /product="dihydrofolate reductase"
                     /EC_number="1.5.1.3"
                     /GO_function="GO:0004146 - dihydrofolate reductase
                     activity [Evidence IEA]"
                     /GO_process="GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /calculated_mol_wt=17463
     Region          1..133
                     /region_name="DHFR"
                     /note="Dihydrofolate reductase (DHFR). Reduces
                     7,8-dihydrofolate to 5,6,7,8-tetrahydrofolate with NADPH
                     as a cofactor. This is an essential step in the
                     biosynthesis of deoxythymidine phosphate since
                     5,6,7,8-tetrahydrofolate is required to regenerate 5;
                     cl17279"
                     /db_xref="CDD:473077"
     Site            order(2,19,24,57,95,101,114)
                     /site_type="other"
                     /note="folate binding site [chemical binding]"
                     /db_xref="CDD:238127"
     Site            order(4,11,41..43,64,96..99)
                     /site_type="other"
                     /note="NADP+ binding site [chemical binding]"
                     /db_xref="CDD:238127"
ORIGIN      
        1 mvwaqtpggt iasdgdlpwd vpedfahfra tvrghavvmg ratwdsmppa mrpmphsrsv
       61 vltrdgtfea pggevvgsle ealtlladep qvwimgggqv yaagmavadl lvvseidvpe
      121 ptgdvltpap aidagwvqdt pedvagwrts stgtrwrvlh hrrs
//
LOCUS       WP_235866202             156 aa            linear   BCT 02-MAR-2025
DEFINITION  MaoC/PaaZ C-terminal domain-containing protein [Serinibacter
            arcticus].
ACCESSION   WP_235866202
VERSION     WP_235866202.1
KEYWORDS    RefSeq.
SOURCE      Serinibacter arcticus
  ORGANISM  Serinibacter arcticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Beutenbergiaceae; Serinibacter.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Fukui,T., Shiomi,N. and Doi,Y.
  TITLE     Expression and characterization of (R)-specific enoyl coenzyme A
            hydratase involved in polyhydroxyalkanoate biosynthesis by
            Aeromonas caviae
  JOURNAL   J Bacteriol 180 (3), 667-673 (1998)
   PUBMED   9457873
REFERENCE   2  (residues 1 to 156)
  AUTHORS   Steinebach,V., Benen,J.A., Bader,R., Postma,P.W., De Vries,S. and
            Duine,J.A.
  TITLE     Cloning of the maoA gene that encodes aromatic amine oxidase of
            Escherichia coli W3350 and characterization of the overexpressed
            enzyme
  JOURNAL   Eur J Biochem 237 (3), 584-591 (1996)
   PUBMED   8647101
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013722.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01575.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Serinibacter arcticus"
                     /db_xref="taxon:1655435"
     Protein         1..156
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /calculated_mol_wt=16007
     Region          18..152
                     /region_name="hot_dog"
                     /note="The hotdog fold was initially identified in the E.
                     coli FabA (beta-hydroxydecanoyl-acyl carrier protein
                     (ACP)-dehydratase) structure and subsequently in 4HBT
                     (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A
                     number of other seemingly unrelated...; cl00509"
                     /db_xref="CDD:469797"
     Site            order(65..66,99..102)
                     /site_type="active"
                     /note="active site 2 [active]"
                     /db_xref="CDD:239524"
     Site            order(71,74..75,78,91..93)
                     /site_type="active"
                     /note="active site 1 [active]"
                     /db_xref="CDD:239524"
ORIGIN      
        1 msaemtppsl paladaavgd vlftrevavt rdrlvryaga srdfnaihyn davatsvglp
       61 gviahgmltm glagsaltdw laehdpsgpg rvarygtrfs rpipvpatgd vlltvtgtlg
      121 avdqtdddga acvrvdlrae algvtvlaka qalvrv
//
LOCUS       WP_235866218             170 aa            linear   BCT 02-MAR-2025
DEFINITION  TniB family NTP-binding protein [Vibrio paracholerae].
ACCESSION   WP_235866218
VERSION     WP_235866218.1
KEYWORDS    RefSeq.
SOURCE      Vibrio paracholerae
  ORGANISM  Vibrio paracholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 170)
  AUTHORS   Kholodii,G.Y., Mindlin,S.Z., Bass,I.A., Yurieva,O.V.,
            Minakhina,S.V. and Nikiforov,V.G.
  TITLE     Four genes, two ends, and a res region are involved in
            transposition of Tn5053: a paradigm for a novel family of
            transposons carrying either a mer operon or an integron
  JOURNAL   Mol Microbiol 17 (6), 1189-1200 (1995)
   PUBMED   8594337
REFERENCE   2  (residues 1 to 170)
  AUTHORS   Radstrom,P., Skold,O., Swedberg,G., Flensburg,J., Roy,P.H. and
            Sundstrom,L.
  TITLE     Transposon Tn5090 of plasmid R751, which carries an integron, is
            related to Tn7, Mu, and the retroelements
  JOURNAL   J Bacteriol 176 (11), 3257-3268 (1994)
   PUBMED   8195081
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05621.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Vibrio paracholerae"
                     /db_xref="taxon:650003"
     Protein         1..170
                     /product="TniB family NTP-binding protein"
                     /calculated_mol_wt=19374
     Region          22..160
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 mnlsakqeia vdelltqyhn sfviypdvqq ifdgldwivr rsqfgnftps mlitggtgag
       61 ktslinhyak yhfndnevli trvrpsfiet liwaidklgi pyntrskrse iglqdyfins
      121 vkksnlkllv ieeaqelfec aspkerqkir drlkmisdec tgqpkldtst
//
LOCUS       WP_235866238             812 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 C-terminal domain-containing protein
            [Serinibacter arcticus].
ACCESSION   WP_235866238
VERSION     WP_235866238.1
KEYWORDS    RefSeq.
SOURCE      Serinibacter arcticus
  ORGANISM  Serinibacter arcticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Beutenbergiaceae; Serinibacter.
REFERENCE   1  (residues 1 to 812)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014026.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01915.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Serinibacter arcticus"
                     /db_xref="taxon:1655435"
     Protein         1..812
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=85776
     Region          17..458
                     /region_name="BglX"
                     /note="Periplasmic beta-glucosidase and related
                     glycosidases [Carbohydrate transport and metabolism];
                     COG1472"
                     /db_xref="CDD:441081"
     Region          338..677
                     /region_name="Glyco_hydro_3_C"
                     /note="Glycosyl hydrolase family 3 C-terminal domain;
                     pfam01915"
                     /db_xref="CDD:396478"
     Region          399..524
                     /region_name="beta-trefoil_FSCN_BglX-like"
                     /note="fascin-like domain, beta-trefoil fold, found in
                     uncharacterized beta-glucosidase-like proteins; cd23343"
                     /db_xref="CDD:467451"
     Region          734..>771
                     /region_name="Fn3-like"
                     /note="Fibronectin type III-like domain; pfam14310"
                     /db_xref="CDD:433860"
ORIGIN      
        1 mtaasrplda tevlaaltld ekiamlhqhs paverlglap fhtgteglhg lswlgtatvf
       61 pqpvglaasw dpellravgd avatevrakh aqdpavslnv wapvvntlrh plwgrteegy
      121 sedpdltasl atgfcrglrg dhpevwktvp tlkhylaygn etdravtssh lppqslrewe
      181 lpafvgplaa gvvgavmpsy nlvngrpnhv agelldelrs fsptsiavvs daqapsnlvd
      241 geryfddhva shaaallagi dsftdnsedt gptiervtaa laaglvtead vdrallrvle
      301 lrertgelsg qdpygvgpeg idlpehrala resaargvvv landaevlpl rspariavvg
      361 pfadrvvhdw ysgtppytss iasalreryp daevvvadga drvalrslth drylelqpdg
      421 vltatavaph pgtqldvtdw gdgvaslrav gndllltgss wiqaatssri ggwvaqetyr
      481 lhthhdgtvs vqhvgsgkwl rvqhgthllv adgtattaer farhvvvagt aavtaastgs
      541 dvvvvalgnd phvagreted rpdlllapgs reiwrtavat gapavltlvs sypyavaeea
      601 asaaavvwts hagqelghgl vdvlsgdrep sgrlaqtwwa reedagdlld ydvvgagqty
      661 ryadatplyg lghglswtsv ayrglrlatd rveapaattv hvaadraeag dgaidavvtv
      721 antgarpvde lvavwahape lpvpaprrrl aawtrvdlap getrdvtlrv psasspsgtw
      781 pprpptatrp gpqhpgptac srgrtgwrpa dr
//
LOCUS       WP_235866312             392 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Serinibacter arcticus].
ACCESSION   WP_235866312
VERSION     WP_235866312.1
KEYWORDS    RefSeq.
SOURCE      Serinibacter arcticus
  ORGANISM  Serinibacter arcticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Beutenbergiaceae; Serinibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Serinibacter arcticus"
                     /db_xref="taxon:1655435"
     Protein         1..392
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=41051
     Region          3..369
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mclhtdpyap pgsgdvggmn vvvrhtcdal araghrvevi trwsdpatag reeidgvvvh
       61 rlavgpprtv lkgeneafmd dfgrelallg pmdllhshhw fsgiaalpva rswgvphlqs
      121 fhsiaapest dlsagerpes pgrlqgeafl aqqsdgvlav sraeamtale rlgapperlt
      181 vvypgvdsal fhpapetpgk rssvlvaarl eplkgvdlai ralallpver rpllriagga
      241 tadasfgpel lelaaglglr ddvellgpqs rtgladlmrs stmvmvpshs etyglvalea
      301 aasgvpvias atgglveavr dgttgllvqg rrpqdwaaav drllaepelr erlgrqgreh
      361 avartwdsvg avvarayrgv vvgagvsavg ra
//
LOCUS       WP_235866135             185 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6328 family protein [Serinibacter arcticus].
ACCESSION   WP_235866135
VERSION     WP_235866135.1
KEYWORDS    RefSeq.
SOURCE      Serinibacter arcticus
  ORGANISM  Serinibacter arcticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Beutenbergiaceae; Serinibacter.
REFERENCE   1  (residues 1 to 185)
  AUTHORS   Ramos,A., Lombo,F., Brana,A.F., Rohr,J., Mendez,C. and Salas,J.A.
  TITLE     Biosynthesis of elloramycin in Streptomyces olivaceus requires
            glycosylation by enzymes encoded outside the aglycon cluster
  JOURNAL   Microbiology (Reading) 154 (Pt 3), 781-788 (2008)
   PUBMED   18310024
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039409.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19853.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Serinibacter arcticus"
                     /db_xref="taxon:1655435"
     Protein         1..185
                     /product="DUF6328 family protein"
                     /calculated_mol_wt=19651
     Region          22..162
                     /region_name="DUF6328"
                     /note="Family of unknown function (DUF6328); pfam19853"
                     /db_xref="CDD:466208"
ORIGIN      
        1 msatdpddpg vpddvalahg rdesgaerad rnwsellqel rvmqtgvqvl tgflltlpfq
       61 qrfaeldryq ltlylalvcl svattgvlia pvavhrsvfr rglkaplvta sdrltrlglv
      121 mlglvvtgta mlafdvvlsr tagivvgaca atllavlwvl vpqrlgaaar daardrartv
      181 ahvsp
//
LOCUS       WP_235866314            1054 aa            linear   BCT 02-MAR-2025
DEFINITION  discoidin domain-containing protein [Serinibacter arcticus].
ACCESSION   WP_235866314
VERSION     WP_235866314.1
KEYWORDS    RefSeq.
SOURCE      Serinibacter arcticus
  ORGANISM  Serinibacter arcticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Beutenbergiaceae; Serinibacter.
REFERENCE   1  (residues 1 to 1054)
  AUTHORS   Baumgartner,S., Hofmann,K., Chiquet-Ehrismann,R. and Bucher,P.
  TITLE     The discoidin domain family revisited: new members from prokaryotes
            and a homology-based fold prediction
  JOURNAL   Protein Sci 7 (7), 1626-1631 (1998)
   PUBMED   9684896
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012956.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00754.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Serinibacter arcticus"
                     /db_xref="taxon:1655435"
     Protein         1..1054
                     /product="discoidin domain-containing protein"
                     /calculated_mol_wt=113323
     Region          75..450
                     /region_name="GH43_CtGH43-like"
                     /note="Glycosyl hydrolase family 43 protein similar to
                     Clostridium thermocellum exo-beta-1,3-galactanase CtGH43
                     and Ruminococcus champanellensis arabinanase Ara43A;
                     cd18825"
                     /db_xref="CDD:350146"
     Region          723..845
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
ORIGIN      
        1 mtsrtrrgav vmaaalavgl vpslvatgaa aapgdgvpst dtpityttfg aiqdggltsa
       61 gyfqpfwydt dgrhiqahgg qtvtvqeage tvhywygedr sngywgspgv avyrstdlmn
      121 wtnegtamrs vsardeltep yfddlygtld asgqpddari delnfhlntt qaedytaife
      181 rpkvlyndat dewvmwwhsd gritpggsty arsfaavava dsptgpfrmt gayrlynran
      241 yqactssavp gqardmtvfk dadgtayisy sseenyslyi aklnadytnv ehtvptdtig
      301 ahqysedgef pyifadgtad apvrgedfqi vkecghleap aifangdtya tlasgatgwg
      361 pnpqtyytad dllgtwirgv eaddvhenvn yasipeggdg llsvgdvrkt tfgsqgtnvi
      421 tlapgkyvym gdrwnegknd styvwlpltv gengrlemhn paiedparwg qgwdasywdd
      481 kgygvgtwsv tedglvdtva rgtdpatvlp ttvtvdsagt trttgvtwsd vdlgrlgkqt
      541 vtgtldgdat fadgrtfrrt itvtadgivn iaplaavtvs srsdlagrlt dgdvkgkgwd
      601 dwaaagaypr sstltfawda prtldsiavh tykdsgvasw psaiavqvrd qsgawvdspl
      661 aaqllqdpsl paptalldat elpevtgvrl rltseadtwq aiseveiwgd appvnvcrap
      721 gstvsasfhq trwntfpaag acdgnagtsw stwsdtdlrd svtftieaaq ahlldrvsft
      781 niegtiasvg veyrdvdgtw tptsaqdvap aanstvttig fddvtatglr ltfatpgsyl
      841 kiteiqvpek vvapvvspfl dvpvdnefft eiawlaeqri stgwtteagv efrplapiar
      901 damaaflyrm agspeftapt tspftdvptt nlyydeiawl adqeistgwa vgagaefrpl
      961 epiardamaa flyryagavl gtdvegyvtp ttsrfedvsp atlyhreisw ladaeistgw
     1021 dlgegraeyr plspvardam aaflyrsvdg adig
//
LOCUS       WP_235866322             343 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-binding protein [Serinibacter arcticus].
ACCESSION   WP_235866322
VERSION     WP_235866322.1
KEYWORDS    RefSeq.
SOURCE      Serinibacter arcticus
  ORGANISM  Serinibacter arcticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Beutenbergiaceae; Serinibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13460.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Serinibacter arcticus"
                     /db_xref="taxon:1655435"
     Protein         1..343
                     /product="NAD(P)H-binding protein"
                     /calculated_mol_wt=36360
     Region          3..297
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(7,9..10,12,31..33,72..74,107..109,122,126,145..148)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(85,109,122,126)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mtvlvtgatg yvgsrlvpal leaghavras assagkldsl wwgdraehva mdvddddqvr
       61 eavagvetvv ylihgldaed fvrkdreaae rmarharaag varivylsgi vpdvpredls
      121 dhirsrleve ealgdsgipt vslraavllg sgstsfeiir qiserlplqt iptwmhseiq
      181 piavvdavaa lvgavgwdgs rvfdvggpdr lpypdllaty aritelprpq iplpllpega
      241 vgaiaarltd vptatvealv dslshdmvaa dddfvrellp aghrlvglee sirraladkd
      301 pdadpatadp mgplpqdpdw aeggsgivsr itgaidafqk rlg
//
LOCUS       WP_235866344             558 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Serinibacter arcticus].
ACCESSION   WP_235866344
VERSION     WP_235866344.1
KEYWORDS    RefSeq.
SOURCE      Serinibacter arcticus
  ORGANISM  Serinibacter arcticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Beutenbergiaceae; Serinibacter.
REFERENCE   1  (residues 1 to 558)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Serinibacter arcticus"
                     /db_xref="taxon:1655435"
     Protein         1..558
                     /product="AMP-binding protein"
                     /calculated_mol_wt=59019
     Region          1..558
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(211,214..219,221..222)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(214,330..331,352..357,437,449,452,463,544)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(214,255..256,303,305..306,309,330..331,352..357,437,
                     449,452,460..463,525)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(255,305..306,309,330,460..462,519,525)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
ORIGIN      
        1 mnataprpef gpltvtipde svphgltaaa tawpdriavd flratltyae ldaqvaraaq
       61 alldlgvepg drvaialpnc tthvvafyav lriggvvveh nptytatqlv hqlsdsgarv
      121 aivwekvara algartsspl ttviavnvag dlprgsqlal rlpvraarat rdalradvpa
      181 galrwerlvr rggpalpash pypassdval lqytggttgt pkgavlthrn lvanavqcae
      241 wtrtvggtet lygalpffha fgltlclgyg irtgatlvif pkfdpaalvs aqkrrpgtfl
      301 pavppmidrf ttaareagva ltsfrfafsg amalpeataq aweeatggya iegygmtets
      361 pvalgnpvsa erragalgvp fpdteirvvd aesledvepg argelllrgp qvfsgywnrp
      421 eetahqlled gwlrtgdvvt vdeagfvtlv drikemivtg gfkvypsqve drlrempgva
      481 dvavvgmpag dlgekvvaai vldgtvpais laelrawaae svasyavpre lvvvtelprs
      541 iigkvlrrvv rddldasr
//
LOCUS       WP_235866357             840 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase-fold protein [Serinibacter arcticus].
ACCESSION   WP_235866357
VERSION     WP_235866357.1
KEYWORDS    RefSeq.
SOURCE      Serinibacter arcticus
  ORGANISM  Serinibacter arcticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Beutenbergiaceae; Serinibacter.
REFERENCE   1  (residues 1 to 840)
  AUTHORS   Goins,C.M., Dajnowicz,S., Smith,M.D., Parks,J.M. and Ronning,D.R.
  TITLE     Mycolyltransferase from Mycobacterium tuberculosis in covalent
            complex with tetrahydrolipstatin provides insights into antigen 85
            catalysis
  JOURNAL   J Biol Chem 293 (10), 3651-3662 (2018)
   PUBMED   29352107
REFERENCE   2  (residues 1 to 840)
  AUTHORS   van Straaten,K.E., Gonzalez,C.F., Valladares,R.B., Xu,X.,
            Savchenko,A.V. and Sanders,D.A.
  TITLE     The structure of a putative S-formylglutathione hydrolase from
            Agrobacterium tumefaciens
  JOURNAL   Protein Sci 18 (10), 2196-2202 (2009)
   PUBMED   19653299
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012958.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00756.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Serinibacter arcticus"
                     /db_xref="taxon:1655435"
     Protein         1..840
                     /product="alpha/beta hydrolase-fold protein"
                     /calculated_mol_wt=89412
     Region          140..384
                     /region_name="Fes"
                     /note="Enterochelin esterase or related enzyme [Inorganic
                     ion transport and metabolism]; COG2382"
                     /db_xref="CDD:441948"
     Region          430..502
                     /region_name="E_set"
                     /note="Early set domain associated with the catalytic
                     domain of sugar utilizing enzymes at either the N or C
                     terminus; cl28984"
                     /db_xref="CDD:475140"
     Region          494..734
                     /region_name="Fes"
                     /note="Enterochelin esterase or related enzyme [Inorganic
                     ion transport and metabolism]; COG2382"
                     /db_xref="CDD:441948"
ORIGIN      
        1 midtrknrpp tgraggvrpg rrlaamalga glvlagtaai gapasaatpw ltvdedgfar
       61 fsvsvtdvea avgqdvsqiv aegnfgpsan waefgltisg dratgilgpl epghyyyqvt
      121 addtltvkdp tnstsvasep ewstffvage gaelmadapq esrgevaemt yrssvagqdr
      181 salvwtppgy dadraepypv lylqhgggqs yrdwvevgra aqifdnlhaq gsiepmvvvm
      241 gngnvssfad ellrnivrta erqynissdp aqralaglsm gggqtfdvmv sdpgefaylg
      301 tfgagrfnnl dalpaeaina gtallrlyvg nptdvayndv aaalpkldaa gvryqfdgan
      361 pdaghnwdaw qenlidfapr lfggeslpgm spghtaieap fttppsgttp tpwvsedgyv
      421 tfetstefan akhvtvwanw gpshlwtrve lskvgdrwrg tvgqlepgwy hyrlivdrva
      481 vkdtsnptsv tteptwsqfl vpgegarlvt papegergtv apmaypsitg qqrtalvwtp
      541 vdydaeraep ypvlylqhgg gqsytdwtem gqaanildnh yrdgnlepmv vvmgngnvpd
      601 ftrelkeniv ptaeatfnis sepadralag lsmggghtlt awrtnpgmfs higvfsagys
      661 gngsdldvda lnagttllrl yngnvtdfty ggvvtmlsvf drvgikyefd gwfegphgwd
      721 twqyaladfa prlftsatae dgagipveat vppiaqghls mtvaaygekv vlgealnvgd
      781 rlrlagalpq ltvtdsrseq qagssgwava gqssdltggs reilaghlgw tpkvltpara
//
LOCUS       WP_235866359             356 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Serinibacter arcticus].
ACCESSION   WP_235866359
VERSION     WP_235866359.1
KEYWORDS    RefSeq.
SOURCE      Serinibacter arcticus
  ORGANISM  Serinibacter arcticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Beutenbergiaceae; Serinibacter.
REFERENCE   1  (residues 1 to 356)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 356)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 356)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Serinibacter arcticus"
                     /db_xref="taxon:1655435"
     Protein         1..356
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=37050
     Region          72..320
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(160..161,164,189)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238566"
ORIGIN      
        1 msstflrtar rraavigaag aalaltlagc sgggdsepta setsastees astdgaypvt
       61 idgalgsvti eekpervval gwgtdiaysl gtvpvgveaq pwggdadgyt pwfrealeag
      121 gdelpatian tgeydvdaii alepdlilap nsgltqeqyd qlsdftnvva ypegpwltpv
      181 deqieitaqa lgvpeqaqel idatdavvad aaaanpdlan ytftyvylga eagtldiypq
      241 gdgrvdlltg lglqpdpvwa dyaptetsfv mslglenadq lassdiivtw fndeteqata
      301 tsqplwqsip avqndavyev ldrglglatt vstplsvpwa ieayvpilne tvakag
//
LOCUS       WP_235865774             194 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: molecular chaperone TorD family protein
            [Photobacterium].
ACCESSION   WP_235865774
VERSION     WP_235865774.1
KEYWORDS    RefSeq.
SOURCE      Photobacterium
  ORGANISM  Photobacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae.
REFERENCE   1  (residues 1 to 194)
  AUTHORS   Ilbert,M., Mejean,V., Giudici-Orticoni,M.T., Samama,J.P. and
            Iobbi-Nivol,C.
  TITLE     Involvement of a mate chaperone (TorD) in the maturation pathway of
            molybdoenzyme TorA
  JOURNAL   J Biol Chem 278 (31), 28787-28792 (2003)
   PUBMED   12766163
REFERENCE   2  (residues 1 to 194)
  AUTHORS   Pantel,I., Lindgren,P.E., Neubauer,H. and Gotz,F.
  TITLE     Identification and characterization of the Staphylococcus carnosus
            nitrate reductase operon
  JOURNAL   Mol Gen Genet 259 (1), 105-114 (1998)
   PUBMED   9738886
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014651.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02613.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Photobacterium"
                     /db_xref="taxon:657"
     Protein         1..194
                     /product="molecular chaperone TorD family protein"
                     /calculated_mol_wt=21476
     Region          1..172
                     /region_name="torD"
                     /note="chaperone protein TorD; Validated; cl00958"
                     /db_xref="CDD:470012"
ORIGIN      
        1 meniktlsrv igglfyyhps qyetvglsav lsldhtgftq fdttiaaisa tdphtlsvwh
       61 delftgigem kappwgsvyl dkeavvfgds tlhfrqflqq ygikfetshn epedqfglml
      121 mviasliedn nldavtells khllpwaphy lallqqvapt gayrelaelg qafivalakt
      181 fnaeivpgki yfna
//
LOCUS       WP_235866257             610 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-galactosidase [Serinibacter arcticus].
ACCESSION   WP_235866257
VERSION     WP_235866257.1
KEYWORDS    RefSeq.
SOURCE      Serinibacter arcticus
  ORGANISM  Serinibacter arcticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Beutenbergiaceae; Serinibacter.
REFERENCE   1  (residues 1 to 610)
  AUTHORS   Naumoff,D.G.
  TITLE     Hierarchical classification of glycoside hydrolases
  JOURNAL   Biochemistry (Mosc) 76 (6), 622-635 (2011)
   PUBMED   21639842
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014156.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02065.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Serinibacter arcticus"
                     /db_xref="taxon:1655435"
     Protein         1..610
                     /product="alpha-galactosidase"
                     /EC_number="3.2.1.22"
                     /calculated_mol_wt=66662
     Region          <4..152
                     /region_name="Glyco_hydro_36N"
                     /note="Glycosyl hydrolase family 36 N-terminal domain;
                     pfam16875"
                     /db_xref="CDD:465291"
     Region          161..499
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
     Site            order(204,235,279,344,348,390,409,412)
                     /site_type="active"
                     /db_xref="CDD:269892"
     Region          516..>556
                     /region_name="Glyco_hydro_36C"
                     /note="Glycosyl hydrolase family 36 C-terminal domain;
                     pfam16874"
                     /db_xref="CDD:465290"
ORIGIN      
        1 mplagtvvve aadepaglal tltiqltaqg lvrtrttltn tgagtfdlat ldtvlplpre
       61 ageildftgr hlrerspqrh alvagthlre srrgrshdgt llmlagtpgf gyrsgevwgv
      121 hlawsgntrt faeqempsgq rvlgagelll agevrlgege sytspwllas fgdgidalsr
      181 rfheflrarp ehpttprksl invweavyfd hdldklrala daaarvgler yvlddgwfnh
      241 rrddhaglgd wyvdadvwpd gldpivdhvt glglefglwf epeminedsd varahpewil
      301 rmpsrlprra rnqqvmdltn pdawqyiydr mhailgahri gfvkwdhnrd lfdagrqatg
      361 tagvheqtla tyrllaalre ahpdvefesc sggggradlg ilaltdriwt sdcidplerq
      421 iieagtgllv ppemlgshva sphshttgrr hdlsfraata mfghlgvewd ltsasdadld
      481 elatwiaayt ahrdllhhgv tvrsddpdpa lrvhgvvsad areaiiavvq vttgvtappg
      541 rvripgldpa ttyrvtplap gddpgprrgr evpawwsdgv altgrvlaat glqapnqlpe
      601 htvllhltal
//
LOCUS       WP_235866534             160 aa            linear   BCT 02-MAR-2025
DEFINITION  LPS assembly lipoprotein LptE [Primorskyibacter flagellatus].
ACCESSION   WP_235866534
VERSION     WP_235866534.1
KEYWORDS    RefSeq.
SOURCE      Primorskyibacter flagellatus
  ORGANISM  Primorskyibacter flagellatus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Primorskyibacter.
REFERENCE   1  (residues 1 to 160)
  AUTHORS   Sperandeo,P., Lau,F.K., Carpentieri,A., De Castro,C., Molinaro,A.,
            Deho,G., Silhavy,T.J. and Polissi,A.
  TITLE     Functional analysis of the protein machinery required for transport
            of lipopolysaccharide to the outer membrane of Escherichia coli
  JOURNAL   J Bacteriol 190 (13), 4460-4469 (2008)
   PUBMED   18424520
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016290.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04390.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Primorskyibacter flagellatus"
                     /db_xref="taxon:1387277"
     gene            1..160
                     /gene="lptE"
     Protein         1..160
                     /product="LPS assembly lipoprotein LptE"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /GO_process="GO:0043165 - Gram-negative-bacterium-type
                     cell outer membrane assembly [Evidence IEA]"
                     /calculated_mol_wt=16710
     Region          1..160
                     /region_name="COG5468"
                     /note="Predicted lipoprotein involved in
                     lipopolysaccharide assembly [Function unknown]"
                     /db_xref="CDD:444219"
ORIGIN      
        1 mssdrrlfll salalgacgf tpaygpsgga salqgqvrld apggrasyll nqrleerlgh
       61 aptgryalsy alktgrddlg ttsegvtsry hlsgsatwsl tdtdervvas gkvdsfssys
      121 ptgstvatra sqrdatarlm iiladqlvdq lllqasdlpa
//
LOCUS       WP_235866565             144 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Primorskyibacter flagellatus].
ACCESSION   WP_235866565
VERSION     WP_235866565.1
KEYWORDS    RefSeq.
SOURCE      Primorskyibacter flagellatus
  ORGANISM  Primorskyibacter flagellatus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Primorskyibacter.
REFERENCE   1  (residues 1 to 144)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 144)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Primorskyibacter flagellatus"
                     /db_xref="taxon:1387277"
     Protein         1..144
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=15331
     Region          9..137
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
     Site            order(63..65,75..76)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
ORIGIN      
        1 mtiavmspdd maalqarayq hmppwsalal aemiasahal cvtdpqgfal grvvldeael
       61 lalavnpdhq rhgiartlmn rfettartrg avtcflevae tnaparafya algykgigkr
      121 ggyyrqadgp aidalvmska ltld
//
LOCUS       WP_235866781             589 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase family 2 protein [Salibaculum griseiflavum].
ACCESSION   WP_235866781
VERSION     WP_235866781.1
KEYWORDS    RefSeq.
SOURCE      Salibaculum griseiflavum
  ORGANISM  Salibaculum griseiflavum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salibaculum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025082.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13704.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Salibaculum griseiflavum"
                     /db_xref="taxon:1914409"
     Protein         1..589
                     /product="glycosyltransferase family 2 protein"
                     /calculated_mol_wt=65624
     Region          13..112
                     /region_name="Glyco_tranf_2_4"
                     /note="Glycosyl transferase family 2; pfam13704"
                     /db_xref="CDD:433416"
     Region          <479..562
                     /region_name="Metaviral_G"
                     /note="Metaviral_G glycoprotein; pfam09595"
                     /db_xref="CDD:462833"
ORIGIN      
        1 makhtytils mmkdeghslv ewvayhkhig fdnivvytnn cgdgtddmli rleelgwvqh
       61 frndvpegkk pqpnalalas qnpevtdsew iltmdadefl sikvgrgwis dlvekmdpda
      121 samaitwrff gsneitewnp glvienytka apdmfkkgwg vktlfkpyrd mklgihrphi
      181 kkakqepena kllfdqlwln gsgkpmpdef slsgwrstkp tlgykwaeln hyavksyeay
      241 llrrvrgnvn nkpdkyneay falfdrneee htnvqrhlrg tkrrmaqils dpimrelqdk
      301 aldfhkkrvq vlrdsgeydh wltelkeask ipldgldevl fvqhlpkewq ekvkelqaqg
      361 vpdkkiakmi aqtqtakkge trqellkaag hnpeekldah slkgrgdgea esldnpfmnt
      421 eaaaglgvpl aqertqkial aaqaaekddp raadllkkae aakkamaaqq arteakvdit
      481 dpappietil deatisaseg vqsapgtvpp ppevgapfpd paeaaapttr skttkskagt
      541 tkrkttsrak stssrtksas ksaakpkttr strrkttakt kvkstaakt
//
LOCUS       WP_235866883              52 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF645 family protein, partial [Vibrio paracholerae].
ACCESSION   WP_235866883
VERSION     WP_235866883.1
KEYWORDS    RefSeq.
SOURCE      Vibrio paracholerae
  ORGANISM  Vibrio paracholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016746.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04875.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..52
                     /organism="Vibrio paracholerae"
                     /db_xref="taxon:650003"
     Protein         <1..52
                     /product="DUF645 family protein"
     Region          4..52
                     /region_name="DUF645"
                     /note="Protein of unknown function, DUF645; pfam04875"
                     /db_xref="CDD:282699"
ORIGIN      
        1 kvwfhkgcii aesvlslsri lnrgqlsler fefwqptsql laldvclrea fa
//
LOCUS       WP_235866914             287 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4344 domain-containing metallopeptidase [Photobacterium toruni].
ACCESSION   WP_235866914
VERSION     WP_235866914.1
KEYWORDS    RefSeq.
SOURCE      Photobacterium toruni
  ORGANISM  Photobacterium toruni
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025606.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14247.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Photobacterium toruni"
                     /db_xref="taxon:1935446"
     Protein         1..287
                     /product="DUF4344 domain-containing metallopeptidase"
                     /calculated_mol_wt=32758
     Region          74..254
                     /region_name="DUF4344"
                     /note="Putative metallopeptidase; pfam14247"
                     /db_xref="CDD:433808"
ORIGIN      
        1 mhryyftfnq aidaisshls llirrliysl lwltiscfsy agteqptggs yglaldpvpt
       61 vnfvfitpin tqqqqakdiv qhssilatik qlsqtryifa psleivfgct kgpnfnssqq
      121 eiqipyqyit qllqhitktg ayttqqqryq attdallltl lheighayil draipilgnn
      181 etmvdnfvtv lllndiergd eiainsyqlf sasklngtpl sdnhfiqqhs lsqqryqhil
      241 clvygsnptr yqhlfdsypl aqrqqqqrqc ndiystteqg wlyylsd
//
LOCUS       WP_235866975             103 aa            linear   BCT 02-MAR-2025
DEFINITION  type II toxin-antitoxin system RelE/ParE family toxin
            [Photobacterium toruni].
ACCESSION   WP_235866975
VERSION     WP_235866975.1
KEYWORDS    RefSeq.
SOURCE      Photobacterium toruni
  ORGANISM  Photobacterium toruni
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05973.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Photobacterium toruni"
                     /db_xref="taxon:1935446"
     Protein         1..103
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /calculated_mol_wt=12002
     Region          <29..90
                     /region_name="Gp49"
                     /note="Phage derived protein Gp49-like (DUF891); cl46407"
                     /db_xref="CDD:480747"
ORIGIN      
        1 mqlnienkfk syqthndiyh ckslkllnpk iwkykgliyk lrvdngkesa rvlfiktken
       61 dvviihaflk stqktpkkea kqaisvyqql ddidieawtn hgq
//
LOCUS       WP_235867009             623 aa            linear   BCT 02-MAR-2025
DEFINITION  GEVED domain-containing protein, partial [Photobacterium toruni].
ACCESSION   WP_235867009
VERSION     WP_235867009.1
KEYWORDS    RefSeq.
SOURCE      Photobacterium toruni
  ORGANISM  Photobacterium toruni
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
REFERENCE   1  (residues 1 to 623)
  AUTHORS   Back,C.R., Sztukowska,M.N., Till,M., Lamont,R.J., Jenkinson,H.F.,
            Nobbs,A.H. and Race,P.R.
  TITLE     The Streptococcus gordonii Adhesin CshA Protein Binds Host
            Fibronectin via a Catch-Clamp Mechanism
  JOURNAL   J Biol Chem 292 (5), 1538-1549 (2017)
   PUBMED   27920201
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039776.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20009.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Photobacterium toruni"
                     /db_xref="taxon:1935446"
     Protein         <1..623
                     /product="GEVED domain-containing protein"
     Region          201..235
                     /region_name="GEVED"
                     /note="GEVED domain; pfam20009"
                     /db_xref="CDD:466256"
     Region          <532..618
                     /region_name="COG4719"
                     /note="Uncharacterized conserved protein, UCP014979 family
                     [Function unknown]"
                     /db_xref="CDD:443754"
ORIGIN      
        1 ngklqagalv idnaislyam tnggnhdtnq dgtidlnera vvyrinvmtq eveyvtasne
       61 gslqgndgag cydstdygda avsyglvshg yldaaldgta dlalgsrwdp eftqwisada
      121 tgddthgqdd edlnipaqii vetsttlpiq vvgngfvsiw vdlnndgdfa dsnellindq
      181 avtagnnnia itldaasaeg fngntvmrvr lcsaanscnt fdgaavdgev edhlfellnr
      241 ivlsgvvfed ngvsgataah dgiqegseig lgnftvtvtf ndtgvtgvtt geviatdits
      301 gdgsykfilg vdfsgknlll dvikqadwid iseanvtaip qvtstsvids qmtvnanagd
      361 disgldfgkv reprmepdnf sevepgksvl fphkftaata gsvnfsiinp eaapandswn
      421 tvlyldndcn geidgadtqi inpvavngnt avcllskvfv padaplnaqy hydiaadmif
      481 adsigtghgi trqvldkdtv ratfrgagel klektvrnit qgtavgisnn grpgdileyv
      541 itftnvgdgd ltevsifdst psytelsqai dctsgsvpas ltcapvtvng inavgyegev
      601 rwnmtgslap giqgsviyyi aiq
//
LOCUS       WP_235867014              92 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Photobacterium toruni].
ACCESSION   WP_235867014
VERSION     WP_235867014.1
KEYWORDS    RefSeq.
SOURCE      Photobacterium toruni
  ORGANISM  Photobacterium toruni
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
REFERENCE   1  (residues 1 to 92)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Photobacterium toruni"
                     /db_xref="taxon:1935446"
     Protein         1..>92
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>92
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 mskekfervk phvnvgtigh vdhgkttlta aicttlakvy ggvakdfasi dnapeererg
       61 itistshvey dtptrhyahv dcpghadyvk nm
//
LOCUS       WP_235867060             547 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Roseibium marinum].
ACCESSION   WP_235867060
VERSION     WP_235867060.1
KEYWORDS    RefSeq.
SOURCE      Roseibium marinum
  ORGANISM  Roseibium marinum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Roseibium.
REFERENCE   1  (residues 1 to 547)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Roseibium marinum"
                     /db_xref="taxon:281252"
     Protein         1..547
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=60133
     Region          130..>297
                     /region_name="dnaA"
                     /note="chromosomal replication initiator protein DnaA;
                     cl42516"
                     /db_xref="CDD:455861"
     Region          <246..530
                     /region_name="EAL"
                     /note="EAL domain, c-di-GMP-specific phosphodiesterase
                     class I (or its enzymatically inactive variant) [Signal
                     transduction mechanisms]; COG2200"
                     /db_xref="CDD:441802"
ORIGIN      
        1 mgrtgtifva icmgvialss atvlvfqfgr pfgesmslsl almctmilvh lligrardrs
       61 avgeavdrle drmadldedv gnlegrltgm ehavprrtra eidplfaeve vlgtlvkqma
      121 eamadletkv edqqaltppp rmqslprypq gqqpqgyqpq ghqpqghqpq vhqpvqgypg
      181 esqpahqpgy pagpypapdh mvepqqgygq fppsgdghgg paeaysgsra tghsdmaeld
      241 rrygvhaprh pedamrapdv yaadpkepgr lsgeravtqp nrpgpdmamr elvasalnan
      301 rvelhlqpiv slpqrqvkyy eaytrlrdsa gnlieasrfl peavqsgqia ridnlllfrs
      361 iqvirrltsr nrnavlfcni salslvdetf fpgflefvks nrifadalvf efsqsdvadm
      421 gpmeleslsa lyeagfrfsi dqisdmkmdf nslagrgfky gklhadylig rreakhghih
      481 psdfgdllhr ygmelitdhv etesqvlell dydvklaqgn lfspprpvka evlqgtpapg
      541 prksaag
//
LOCUS       WP_235866891             333 aa            linear   BCT 02-MAR-2025
DEFINITION  ribonuclease T2 family protein [Photobacterium toruni].
ACCESSION   WP_235866891
VERSION     WP_235866891.1
KEYWORDS    RefSeq.
SOURCE      Photobacterium toruni
  ORGANISM  Photobacterium toruni
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
REFERENCE   1  (residues 1 to 333)
  AUTHORS   Kurihara,H., Nonaka,T., Mitsui,Y., Ohgi,K., Irie,M. and
            Nakamura,K.T.
  TITLE     The crystal structure of ribonuclease Rh from Rhizopus niveus at
            2.0 A resolution
  JOURNAL   J Mol Biol 255 (2), 310-320 (1996)
   PUBMED   8551522
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012659.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00445.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Photobacterium toruni"
                     /db_xref="taxon:1935446"
     Protein         1..333
                     /product="ribonuclease T2 family protein"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0033897 - ribonuclease T2 activity
                     [Evidence IEA]"
                     /calculated_mol_wt=36797
     Region          84..299
                     /region_name="RnaI"
                     /note="Ribonuclease I [Translation, ribosomal structure
                     and biogenesis]; COG3719"
                     /db_xref="CDD:442933"
ORIGIN      
        1 mrpnsllvti lvgnilslss itanasiqss gsftsngsce ayqsfrkqtn pnntqlisnk
       61 qyaikainkk dfdwvqilip naspavrwvs kscgtthlns ntaikpttsf dtspkscntr
      121 nefdsyvlal twqpgfcehf nyrgnkpect aindgklkit nltlhglwpn kascgtkygy
      181 cdryarldls astikeiapw mpnfyyqtkf geyewkkhgv cqnldandyf ltatklvekv
      241 dtsaigqfik anigknvsta sfkkdlishf ganavdrisl acsqgkylne vrlnigksfn
      301 vnssvqalle sgpkgrpfyg nchkkiyiea agk
//
LOCUS       WP_235867194             263 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerophosphodiester phosphodiesterase family protein [Roseibium
            marinum].
ACCESSION   WP_235867194
VERSION     WP_235867194.1
KEYWORDS    RefSeq.
SOURCE      Roseibium marinum
  ORGANISM  Roseibium marinum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Roseibium.
REFERENCE   1  (residues 1 to 263)
  AUTHORS   Kim,H. and Farrand,S.K.
  TITLE     Characterization of the acc operon from the nopaline-type Ti
            plasmid pTiC58, which encodes utilization of agrocinopines A and B
            and susceptibility to agrocin 84
  JOURNAL   J Bacteriol 179 (23), 7559-7572 (1997)
   PUBMED   9393724
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03009.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Roseibium marinum"
                     /db_xref="taxon:281252"
     Protein         1..263
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /GO_function="GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=29154
     Region          13..254
                     /region_name="PI-PLCc_GDPD_SF"
                     /note="Catalytic domain of phosphoinositide-specific
                     phospholipase C-like phosphodiesterases superfamily;
                     cl14615"
                     /db_xref="CDD:472694"
     Site            order(21,50,52,118,151,232)
                     /site_type="active"
                     /db_xref="CDD:176498"
     Site            order(21,65)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176498"
ORIGIN      
        1 mietqamtpd lqavfarpia hrgyhdadng iientpaaia gavekdfaie vdvqetadge
       61 alvfhdytld rltegtgkvi drssrdlvqi hmktgadrlw llqdlfdlvd grvalvieik
      121 sllrrdaqgv fvrrvtdqva ayrgpaaikt fdpdmlsiar ghnpsvlrgi vadgaepgpa
      181 yglhgrmdrf ilrhilhapr trphfisygi kdlpkagpsl lrslcklpim cwtvrtreqr
      241 ekaaqyadqi vfegfdpdkn pti
//
LOCUS       WP_235867224             340 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Vibrio paracholerae].
ACCESSION   WP_235867224
VERSION     WP_235867224.1
KEYWORDS    RefSeq.
SOURCE      Vibrio paracholerae
  ORGANISM  Vibrio paracholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 340)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 340)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 340)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Vibrio paracholerae"
                     /db_xref="taxon:650003"
     Protein         1..340
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=37543
     Region          33..328
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(133..134,137,175)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238347"
ORIGIN      
        1 mavtfshpms rallmgclma clpsiaisqt qkspeilhnc gyplnlstpp ervitvgqas
       61 tellyrldlh drvigtsnwf sdvakefegv nakverladn fpsfesvisk rpdlvmadfl
      121 favgpqgvvg treqfqslgi tsyvldsecv gpssdgspta frldslfqsi knlahmfnvq
      181 akgdelirei rgreeaaitd aqqrnlnrls avfwfssadi kmdpwvagtt gvpawmmstl
      241 giknivdvpe ewpsvgwesi aranpdvivi admtrrrfda ddyqkkldfl rsdpvtrqms
      301 avvnnhivvm dahamratlr sieglehlvk tlslmnlagk
//
LOCUS       WP_235867340             381 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Priestia abyssalis].
ACCESSION   WP_235867340
VERSION     WP_235867340.1
KEYWORDS    RefSeq.
SOURCE      Priestia abyssalis
  ORGANISM  Priestia abyssalis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
REFERENCE   1  (residues 1 to 381)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Priestia abyssalis"
                     /db_xref="taxon:1221450"
     Protein         1..381
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=43011
     Region          35..>379
                     /region_name="cpdB"
                     /note="bifunctional 2',3'-cyclic-nucleotide
                     2'-phosphodiesterase/3'-nucleotidase; PRK09420"
                     /db_xref="CDD:236506"
ORIGIN      
        1 mekrkiaamt mvllifsfil ldvlngtrtk etppatiqlr imetndlhgn mldydykkdk
       61 ktvefglarv asliklsrme nantllfdvg dvlegnalgk yalksfkldq mhihpvykvm
      121 nllhydagtv gnhefkyglr fmreslngan fpyvnaniyi ddhndfaidd inffnpytim
      181 ekefidtngk kqivkvgvig lispitekwn kkffrgnlki knmretaehf vpimkeqgad
      241 iiitlahval kadkglkhke gnsvyslskv pgidailygh shllfpikds kpvkkgvnpn
      301 egtingkaav qagywgnhlg iidltleken gvwvvkhrqs slqpvcktvn gklkpivpvd
      361 ktivkmmkhi hldtlkylrn k
//
LOCUS       WP_235867404             517 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Priestia abyssalis].
ACCESSION   WP_235867404
VERSION     WP_235867404.1
KEYWORDS    RefSeq.
SOURCE      Priestia abyssalis
  ORGANISM  Priestia abyssalis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
REFERENCE   1  (residues 1 to 517)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Priestia abyssalis"
                     /db_xref="taxon:1221450"
     Protein         1..517
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=60103
     Region          6..126
                     /region_name="REC_YesN-like"
                     /note="phosphoacceptor receiver (REC) domain of YesN and
                     related helix-turn-helix containing response regulators;
                     cd17536"
                     /db_xref="CDD:381091"
     Site            order(11..14,17..19,22,108..109)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381091"
     Region          159..277
                     /region_name="GGDEF_2"
                     /note="GGDEF-like domain; pfam17853"
                     /db_xref="CDD:465533"
     Region          <431..517
                     /region_name="AraC"
                     /note="AraC-type DNA-binding domain and AraC-containing
                     proteins [Transcription]; COG2207"
                     /db_xref="CDD:441809"
ORIGIN      
        1 mkmykvivve ddriirrgic qsikwnehgf ivageagdge malgliekeq pqvvisdinm
       61 pfmdglemgk kireispetr iifltgfedf kyahqavklk aydyllkpvd sdqllskake
      121 aaadweqetk kekriieslp ylqqkffqel mkegvqrmdv ekelaelgve legpefaavl
      181 vhspigfqde ckrkltevas sfflqsdfiv mnidpneyai llslegendv rkgqmaqelf
      241 hsynvlehsv titlgrtypn lfelgkslle srlamdlrhi mgtgrifsfe dtvsskeete
      301 drlkelesel eiqiklgipe kvretlnqln kailekksvp ltdlkilalk fstmlffeve
      361 kwkkeeinsf nssdvyqdii kmetlskmie ilnrliqqwc demykkedkn hfshvdqaim
      421 yikdhfhdst ltlkkvaefi hvstpylsnl fklekgfnfg dfllelrmkk ameelregdr
      481 ktyevcekvg ynnpqyfsic fkkftgytpa eykkqfk
//
LOCUS       WP_235867428             436 aa            linear   BCT 02-MAR-2025
DEFINITION  solute carrier family 23 protein [Priestia abyssalis].
ACCESSION   WP_235867428
VERSION     WP_235867428.1
KEYWORDS    RefSeq.
SOURCE      Priestia abyssalis
  ORGANISM  Priestia abyssalis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
REFERENCE   1  (residues 1 to 436)
  AUTHORS   Hogue,D.L. and Ling,V.
  TITLE     A human nucleobase transporter-like cDNA (SLC23A1): member of a
            transporter family conserved from bacteria to mammals
  JOURNAL   Genomics 59 (1), 18-23 (1999)
   PUBMED   10395795
REFERENCE   2  (residues 1 to 436)
  AUTHORS   Tsukaguchi,H., Tokui,T., Mackenzie,B., Berger,U.V., Chen,X.Z.,
            Wang,Y., Brubaker,R.F. and Hediger,M.A.
  TITLE     A family of mammalian Na+-dependent L-ascorbic acid transporters
  JOURNAL   Nature 399 (6731), 70-75 (1999)
   PUBMED   10331392
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013056.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00860.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Priestia abyssalis"
                     /db_xref="taxon:1221450"
     Protein         1..436
                     /product="solute carrier family 23 protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45697
     Region          8..414
                     /region_name="Xan_ur_permease"
                     /note="Permease family; cl23746"
                     /db_xref="CDD:474042"
ORIGIN      
        1 mntnknivld vldkpkstqw lilslqhlfa mfgatilvpy ltkldpaial iasglgtlaf
       61 llitkgrvpa ylgssfafia pilaaqasgg pgaammgsfl sglvygimal mikktgsswl
      121 mkllppivvg piiiviglsl anvavgmamn dadgnystah lltalvtlgi vivcsiyfkg
      181 figlipvlig ivggsvfayt qgimdlskvk eaawfevpnf yipfvsytpe wswnivlimv
      241 pvavvtlseh ighllvlnki vdrdymenpg lhrtvlgdgv atmiaaligg ppnttygeni
      301 gvlaitkvfs vfviggaavi aitfgfigki talissvpsa vmggvsillf giiassglrm
      361 miesnsdlgd krnliissvi lvlgvggaai hisdqleihg malaaivgvi lnlvlpqeka
      421 keikavetiq pktyvs
//
LOCUS       WP_235867551             134 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6188 family protein [Ureibacillus chungkukjangi].
ACCESSION   WP_235867551
VERSION     WP_235867551.1
KEYWORDS    RefSeq.
SOURCE      Ureibacillus chungkukjangi
  ORGANISM  Ureibacillus chungkukjangi
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Ureibacillus.
REFERENCE   1  (residues 1 to 134)
  AUTHORS   Yanai,K., Murakami,T. and Bibb,M.
  TITLE     Amplification of the entire kanamycin biosynthetic gene cluster
            during empirical strain improvement of Streptomyces kanamyceticus
  JOURNAL   Proc Natl Acad Sci U S A 103 (25), 9661-9666 (2006)
   PUBMED   16766657
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2006 Aug 22;103(34):12951]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039679.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19686.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Ureibacillus chungkukjangi"
                     /db_xref="taxon:1202712"
     Protein         1..134
                     /product="DUF6188 family protein"
                     /calculated_mol_wt=15423
     Region          13..130
                     /region_name="DUF6188"
                     /note="Family of unknown function (DUF6188); pfam19686"
                     /db_xref="CDD:466144"
ORIGIN      
        1 mykklsdidf kyfigqrvte vntdkkqplg fsfengnltv ecpwrlrvsr dvvvgysdcl
       61 lapgeyshkn vekilmgksi sniwhyeeis dlvvefeddi ylevfhdssy fegwqlrgdn
      121 glylftlpgg sysd
//
LOCUS       WP_235867582             116 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3889 domain-containing protein [Ureibacillus chungkukjangi].
ACCESSION   WP_235867582
VERSION     WP_235867582.1
KEYWORDS    RefSeq.
SOURCE      Ureibacillus chungkukjangi
  ORGANISM  Ureibacillus chungkukjangi
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Ureibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024428.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13028.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Ureibacillus chungkukjangi"
                     /db_xref="taxon:1202712"
     Protein         1..116
                     /product="DUF3889 domain-containing protein"
                     /calculated_mol_wt=12855
     Region          38..113
                     /region_name="DUF3889"
                     /note="Protein of unknown function (DUF3889); pfam13028"
                     /db_xref="CDD:404048"
ORIGIN      
        1 mktkvaisvl lvlstiavgk iltvppedqt tnaeeiapay akwgrmamqn vmakyptsdv
       61 idylhigrev gsvtsvekfk lwlkaednse fgvfvditfn nqteevvdik ytetkq
//
LOCUS       WP_235867686             433 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Ureibacillus chungkukjangi].
ACCESSION   WP_235867686
VERSION     WP_235867686.1
KEYWORDS    RefSeq.
SOURCE      Ureibacillus chungkukjangi
  ORGANISM  Ureibacillus chungkukjangi
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Ureibacillus.
REFERENCE   1  (residues 1 to 433)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Ureibacillus chungkukjangi"
                     /db_xref="taxon:1202712"
     Protein         1..433
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=48317
     Region          36..179
                     /region_name="globin_sensor"
                     /note="Globin sensor domain of globin-coupled-sensors
                     (GCSs), protoglobins (Pgbs), and sensor single-domain
                     globins (SSDgbs); S family; cd01068"
                     /db_xref="CDD:381256"
     Site            order(39..41,71,129..131,133..134,137,140,161..162,
                     165..166,169,173)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381256"
     Site            order(78,81,91,94..95,98,118,121..122,127,131,135..136,
                     175)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:381256"
     Region          <177..433
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
ORIGIN      
        1 mnhlfalkkk evknsiyken ypnvgifigd adlllqlkii glteedlhii rfikpyvele
       61 ikeiveifyd vigtggefes liatydtsgr lhqtlkhhmi emfdgriddh fievrrkvan
      121 mhvliglktk wylasfynle akiqeiifal nldyiearka iqavrkifsf eqqivldeyd
      181 rvasnalmdq qqnvkaqvke vigsisvtle dqsiltnttv sdlvantkkv ievlqnsiqd
      241 aqgtkeasge gykqlqhlsk qtkeinknti vmtklvedln hssseiqavv eivkniagqt
      301 nllalnsaie aaragehgkg favvadevrk ladqtkqsve kiatligmss vattqviesi
      361 hqiqnlvedg ilqndkslqs fekisasvda tildfenvgk qvgelsnive higdsvhqle
      421 lasttlkdti sqf
//
LOCUS       WP_235867742             190 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: NUDIX domain-containing protein [Rhodococcus].
ACCESSION   WP_235867742
VERSION     WP_235867742.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus
  ORGANISM  Rhodococcus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Rhodococcus"
                     /db_xref="taxon:1827"
     Protein         1..190
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=21104
     Region          5..144
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mrlrhsargl vvddqsrlll yrfiapgggl tvwcppgggl egdetpseal areldeeigl
       61 rdygaathvw heeirdpail pgwggaindy flvpvatafe pcgslgreal aaelvehfew
      121 wsvdrllshs grevfghaiy ptglhawsrm ghrvhridlf grregcevai enehfgietr
      181 lrwgygalra
//
LOCUS       WP_235867417             448 aa            linear   BCT 02-MAR-2025
DEFINITION  opine metallophore biosynthesis dehydrogenase [Priestia abyssalis].
ACCESSION   WP_235867417
VERSION     WP_235867417.1
KEYWORDS    RefSeq.
SOURCE      Priestia abyssalis
  ORGANISM  Priestia abyssalis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
REFERENCE   1  (residues 1 to 448)
  AUTHORS   Ghssein,G., Brutesco,C., Ouerdane,L., Fojcik,C., Izaute,A.,
            Wang,S., Hajjar,C., Lobinski,R., Lemaire,D., Richaud,P.,
            Voulhoux,R., Espaillat,A., Cava,F., Pignol,D., Borezee-Durant,E.
            and Arnoux,P.
  TITLE     Biosynthesis of a broad-spectrum nicotianamine-like metallophore in
            Staphylococcus aureus
  JOURNAL   Science 352 (6289), 1105-1109 (2016)
   PUBMED   27230378
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021605.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10100.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Priestia abyssalis"
                     /db_xref="taxon:1221450"
     Protein         1..448
                     /product="opine metallophore biosynthesis dehydrogenase"
                     /calculated_mol_wt=50835
     Region          19..447
                     /region_name="Staph_opine_DH"
                     /note="Staphylopine dehydrogenase; cl26564"
                     /db_xref="CDD:474813"
ORIGIN      
        1 mnssnhssmg knlfrdlpfg ntlivgagpa aihvavsvsr kwsnniglln rkgshtvrlr
       61 eeleknhdll vskvqgekys clcgeakldy fyegydaidd iwqtiiictp sdsyrdvina
      121 lnvdslkkvk tiilispsig snllvtsqlk sskdridvvs lstyfaatkf epknpsilsv
      181 ftkalkkriy iassqsnsda iwdvkrfies lgiqctvvsn aieaesknit tyvhppffin
      241 efslneilss ggskksmyki ypegpitqhs iramvllwke vsaltqyfga nplnllkfln
      301 ddnypvhdit lsredienfi elgeiqqeyl lyirytsili dpfskpddng kyfdfssvpy
      361 kqvykdkngk wvlpripfed ykkmkliygl aqkvdipmpq tldlinhfer rlnefikekg
      421 edsfypevfv dttqsdvdai fnemgrgk
//
LOCUS       WP_235867828             333 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: helix-turn-helix domain-containing protein
            [Rhodococcus].
ACCESSION   WP_235867828
VERSION     WP_235867828.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus
  ORGANISM  Rhodococcus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Rhodococcus"
                     /db_xref="taxon:1827"
     Protein         1..333
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=36438
     Region          <90..309
                     /region_name="PRK09685"
                     /note="DNA-binding transcriptional activator FeaR;
                     Provisional"
                     /db_xref="CDD:236612"
ORIGIN      
        1 mnsarirvst rsvdpadadd fwrsatrpff vtdridpdts legsitalsi gtsligqttf
       61 naqkytrnnr liaesgldde ymvqvvldgq lsgnadgvdf varqgdvtff dlgrtwtada
      121 eaestgrtit llaprslvea eskgrslhgt vlrgvpavvl aqcmqsvvla lphldpdaaa
      181 gyedvvasll rvslgiaepd lsprpdhslr drayayiaeh lsetwlgpts mcaalsvsra
      241 qlyrafasdg gialvirrkr lelvyreltr tempnetiea lalrcgftsk sqlarsfkdf
      301 ygmtpsqart hgrrtigdps iarlhrrlef fsp
//
LOCUS       WP_235867896              97 aa            linear   BCT 02-MAR-2025
DEFINITION  winged helix-turn-helix domain-containing protein [Pseudomonas
            ogarae].
ACCESSION   WP_235867896
VERSION     WP_235867896.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas ogarae
  ORGANISM  Pseudomonas ogarae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 97)
  AUTHORS   Wietzorrek,A. and Bibb,M.
  TITLE     A novel family of proteins that regulates antibiotic production in
            streptomycetes appears to contain an OmpR-like DNA-binding fold
  JOURNAL   Mol Microbiol 25 (6), 1181-1184 (1997)
   PUBMED   9350875
REFERENCE   2  (residues 1 to 97)
  AUTHORS   Martinez-Hackert,E. and Stock,A.M.
  TITLE     The DNA-binding domain of OmpR: crystal structures of a winged
            helix transcription factor
  JOURNAL   Structure 5 (1), 109-124 (1997)
   PUBMED   9016718
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012698.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00486.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Pseudomonas ogarae"
                     /db_xref="taxon:1114970"
     Protein         1..97
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=11079
     Region          11..>97
                     /region_name="PRK12370"
                     /note="HilA/EilA family virulence transcriptional
                     regulator"
                     /db_xref="CDD:237080"
ORIGIN      
        1 mdsatdqplv kpfvfdhwll qsdgtlmrdg qgvhvppkel hvlrlllksv dsvmskdyll
       61 dhfwprmdaa eesltrciha llkehkdfim tvygqgy
//
LOCUS       WP_235868024             186 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein, partial [Pseudomonas ogarae].
ACCESSION   WP_235868024
VERSION     WP_235868024.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas ogarae
  ORGANISM  Pseudomonas ogarae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Pseudomonas ogarae"
                     /db_xref="taxon:1114970"
     Protein         <1..186
                     /product="phosphopantetheine-binding protein"
     Region          <1..186
                     /region_name="PRK12316"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237054"
ORIGIN      
        1 rdvavlaqda pggqqlvayv vvtalnldas eaqralreql kaglrdhlpd ymipahllfl
       61 dqlpltpngk ldrkalpdvd tgllqvgyva pvsdleqqva aiwaevltln rvglndhffe
      121 lgghsllavn avsrmalelg ltltpqlifq hpvlgdfvaq ldtgdgpine qklnkleall
      181 demeev
//
LOCUS       WP_235867827             161 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease, partial [Rhodococcus qingshengii].
ACCESSION   WP_235867827
VERSION     WP_235867827.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus qingshengii
  ORGANISM  Rhodococcus qingshengii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus; Rhodococcus
            erythropolis group.
REFERENCE   1  (residues 1 to 161)
  AUTHORS   Nicolaou,S.A., Fast,A.G., Nakamaru-Ogiso,E. and Papoutsakis,E.T.
  TITLE     Overexpression of fetA (ybbL) and fetB (ybbM), Encoding an Iron
            Exporter, Enhances Resistance to Oxidative Stress in Escherichia
            coli
  JOURNAL   Appl Environ Microbiol 79 (23), 7210-7219 (2013)
   PUBMED   24038693
REFERENCE   2  (residues 1 to 161)
  AUTHORS   Larsen,P.B., Geisler,M.J., Jones,C.A., Williams,K.M. and
            Cancel,J.D.
  TITLE     ALS3 encodes a phloem-localized ABC transporter-like protein that
            is required for aluminum tolerance in Arabidopsis
  JOURNAL   Plant J 41 (3), 353-363 (2005)
   PUBMED   15659095
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015605.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03649.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Rhodococcus qingshengii"
                     /db_xref="taxon:334542"
     Protein         <1..161
                     /product="ABC transporter permease"
     Region          <26..148
                     /region_name="UPF0014"
                     /note="Uncharacterized protein family (UPF0014); cl00424"
                     /db_xref="CDD:469767"
ORIGIN      
        1 psaphrdrwt vtyrprrrsq rprelhlvpi ggivlggamt atsmaakrgl davddrygev
       61 eaalslgfsq rdarwevart aasdallpgv dqtrtvglvt lpgafvgvll atgsavqaga
      121 vqilvlagll laqtcsvava lelvargfvf rgqavrparv r
//
LOCUS       WP_235868174             280 aa            linear   BCT 02-MAR-2025
DEFINITION  division plane positioning ATPase MipZ [Paremcibacter congregatus].
ACCESSION   WP_235868174
VERSION     WP_235868174.1
KEYWORDS    RefSeq.
SOURCE      Paremcibacter congregatus
  ORGANISM  Paremcibacter congregatus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Emcibacterales; Emcibacteraceae; Paremcibacter.
REFERENCE   1  (residues 1 to 280)
  AUTHORS   Thanbichler,M. and Shapiro,L.
  TITLE     MipZ, a spatial regulator coordinating chromosome segregation with
            cell division in Caulobacter
  JOURNAL   Cell 126 (1), 147-162 (2006)
   PUBMED   16839883
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020704.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09140.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Paremcibacter congregatus"
                     /db_xref="taxon:2043170"
     Protein         1..280
                     /product="division plane positioning ATPase MipZ"
                     /calculated_mol_wt=31436
     Region          10..271
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            order(17..20,28,50,52,143)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:349760"
     Site            order(18..25,47,50,115,118,139,141,143,191)
                     /site_type="active"
                     /db_xref="CDD:349760"
ORIGIN      
        1 mkttknngah iivvgnekgg sgkstsamhi vvsllergft vaiidldarq kslaryienr
       61 qdyaaehglk ltmpdahvlp rseegsaaem eqkdeenllt lignlqneyd yilidcpgsd
      121 tflsrvahms adtlitpvnd sfvdvdllak vnpdtyqvek lslysemvwe arkkralkdr
      181 gtidwvvmrn rtsaldaknk rrvhevlnql qkrvafryvp glgerviyre lfpkgltlvd
      241 frdsgnqkmt mshvaarqei rrlmddlkla gwhkaaaaae
//
LOCUS       WP_235867962             377 aa            linear   BCT 02-MAR-2025
DEFINITION  uroporphyrinogen-III C-methyltransferase [Pseudomonas ogarae].
ACCESSION   WP_235867962
VERSION     WP_235867962.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas ogarae
  ORGANISM  Pseudomonas ogarae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 377)
  AUTHORS   Stenberg,F., Chovanec,P., Maslen,S.L., Robinson,C.V., Ilag,L.L.,
            von Heijne,G. and Daley,D.O.
  TITLE     Protein complexes of the Escherichia coli cell envelope
  JOURNAL   J Biol Chem 280 (41), 34409-34419 (2005)
   PUBMED   16079137
REFERENCE   2  (residues 1 to 377)
  AUTHORS   Sasarman,A., Echelard,Y., Letowski,J., Tardif,D. and Drolet,M.
  TITLE     Nucleotide sequence of the hemX gene, the third member of the Uro
            operon of Escherichia coli K12
  JOURNAL   Nucleic Acids Res 16 (24), 11835 (1988)
   PUBMED   3062586
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016275.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04375.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Pseudomonas ogarae"
                     /db_xref="taxon:1114970"
     Protein         1..377
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /EC_number="2.1.1.107"
                     /calculated_mol_wt=41347
     Region          23..>124
                     /region_name="PilN"
                     /note="Type IV pilus assembly protein PilN [Cell motility,
                     Extracellular structures]; COG3166"
                     /db_xref="CDD:442399"
     Region          128..356
                     /region_name="HemX"
                     /note="putative uroporphyrinogen-III C-methyltransferase;
                     cl27167"
                     /db_xref="CDD:452723"
ORIGIN      
        1 msetalpked ldqpaidapv etpppvaprr gnglavvall lgaagvavgg wgvwqvrhlq
       61 tnnqqqsaqv qalndqaqsl klneqrlser laqlppaeel eerrrlvtql qsdqqhlnqr
      121 letvlgasrk dwrlaeaehl lrlaslrlsa lqdinsaqal vqgadeilre qndpgsfaar
      181 eqlaktlaal rsteqpdrtg lflqlgalrd qvleltelap eykdrgesll gltadgdgas
      241 rwaqwwdqis ryiridfnad envrpllagq slvqvrlals laleqaqwaa lngqapvytq
      301 alteardvlk nnfnqdnpqs kimlervgel skqpvtvvtp dltgtlssvq aylerrnlna
      361 qesvkplpap gaqeatp
//
LOCUS       WP_235868257              58 aa            linear   BCT 02-MAR-2025
DEFINITION  prophage tail fiber N-terminal domain-containing protein [Shigella
            dysenteriae].
ACCESSION   WP_235868257
VERSION     WP_235868257.1
KEYWORDS    RefSeq.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019996.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08400.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..58
                     /organism="Shigella dysenteriae"
                     /db_xref="taxon:622"
     Protein         1..58
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
                     /calculated_mol_wt=6043
     Region          3..>44
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
ORIGIN      
        1 maiisgvyan glgepvvgvq lvltarvtss gvvmttvveq ktvdwppesp dnqynlnk
//
LOCUS       WP_235868265             176 aa            linear   BCT 02-MAR-2025
DEFINITION  fimbria/pilus outer membrane usher protein, partial [Shigella
            dysenteriae].
ACCESSION   WP_235868265
VERSION     WP_235868265.1
KEYWORDS    RefSeq.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
REFERENCE   1  (residues 1 to 176)
  AUTHORS   Huang,Y., Smith,B.S., Chen,L.X., Baxter,R.H. and Deisenhofer,J.
  TITLE     Insights into pilus assembly and secretion from the structure and
            functional characterization of usher PapC
  JOURNAL   Proc Natl Acad Sci U S A 106 (18), 7403-7407 (2009)
   PUBMED   19380723
REFERENCE   2  (residues 1 to 176)
  AUTHORS   Remaut,H., Tang,C., Henderson,N.S., Pinkner,J.S., Wang,T.,
            Hultgren,S.J., Thanassi,D.G., Waksman,G. and Li,H.
  TITLE     Fiber formation across the bacterial outer membrane by the
            chaperone/usher pathway
  JOURNAL   Cell 133 (4), 640-652 (2008)
   PUBMED   18485872
REFERENCE   3  (residues 1 to 176)
  AUTHORS   Jacob-Dubuisson,F., Striker,R. and Hultgren,S.J.
  TITLE     Chaperone-assisted self-assembly of pili independent of cellular
            energy
  JOURNAL   J Biol Chem 269 (17), 12447-12455 (1994)
   PUBMED   7909802
REFERENCE   4  (residues 1 to 176)
  AUTHORS   Schifferli,D.M. and Alrutz,M.A.
  TITLE     Permissive linker insertion sites in the outer membrane protein of
            987P fimbriae of Escherichia coli
  JOURNAL   J Bacteriol 176 (4), 1099-1110 (1994)
   PUBMED   7906265
REFERENCE   5  (residues 1 to 176)
  AUTHORS   Van Rosmalen,M. and Saier,M.H. Jr.
  TITLE     Structural and evolutionary relationships between two families of
            bacterial extracytoplasmic chaperone proteins which function
            cooperatively in fimbrial assembly
  JOURNAL   Res Microbiol 144 (7), 507-527 (1993)
   PUBMED   7906046
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012786.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00577.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Shigella dysenteriae"
                     /db_xref="taxon:622"
     Protein         <1..176
                     /product="fimbria/pilus outer membrane usher protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015473 - fimbrial usher porin activity
                     [Evidence IEA]"
                     /GO_process="GO:0009297 - pilus assembly [Evidence IEA]"
     Region          <19..176
                     /region_name="PRK15217"
                     /note="fimbrial outer membrane usher protein; Provisional"
                     /db_xref="CDD:185139"
ORIGIN      
        1 ssgrllkntc stnwkhhpdt faildapgle gahingqkyn rtnnkgqvvy dlmiphrenh
       61 lvldtanses etelqgnrqi iapyrgavsy vqfttdqrkr wyiqalrpdg spltfgydvl
      121 dlqennigvv gqgsrlfirv deiptgikva lndeqnlfct itfqhviden ktyicq
//
LOCUS       WP_235868104              42 aa            linear   BCT 02-MAR-2025
DEFINITION  YhcH/YjgK/YiaL family protein [Vibrio paracholerae].
ACCESSION   WP_235868104
VERSION     WP_235868104.1
KEYWORDS    RefSeq.
SOURCE      Vibrio paracholerae
  ORGANISM  Vibrio paracholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 42)
  AUTHORS   Kim,Y., Wang,X., Ma,Q., Zhang,X.S. and Wood,T.K.
  TITLE     Toxin-antitoxin systems in Escherichia coli influence biofilm
            formation through YjgK (TabA) and fimbriae
  JOURNAL   J Bacteriol 191 (4), 1258-1267 (2009)
   PUBMED   19060153
REFERENCE   2  (residues 1 to 42)
  AUTHORS   Teplyakov,A., Obmolova,G., Toedt,J., Galperin,M.Y. and
            Gilliland,G.L.
  TITLE     Crystal structure of the bacterial YhcH protein indicates a role in
            sialic acid catabolism
  JOURNAL   J Bacteriol 187 (16), 5520-5527 (2005)
   PUBMED   16077096
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04074.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..42
                     /organism="Vibrio paracholerae"
                     /db_xref="taxon:650003"
     Protein         1..42
                     /product="YhcH/YjgK/YiaL family protein"
                     /calculated_mol_wt=4598
     Region          <2..38
                     /region_name="DUF386"
                     /note="YhcH/YjgK/YiaL; cl46171"
                     /db_xref="CDD:480511"
ORIGIN      
        1 mtlaagqfai ffpgevhkpm snyqgqessv kkaivklryd qi
//
LOCUS       WP_235868267              39 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Shigella dysenteriae].
ACCESSION   WP_235868267
VERSION     WP_235868267.1
KEYWORDS    RefSeq.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
REFERENCE   1  (residues 1 to 39)
  AUTHORS   Yeo,C.C. and Poh,C.L.
  TITLE     Characterization of IS1474, an insertion sequence of the IS21
            family isolated from Pseudomonas alcaligenes NCIB 9867
  JOURNAL   FEMS Microbiol Lett 149 (2), 257-263 (1997)
   PUBMED   9141667
REFERENCE   2  (residues 1 to 39)
  AUTHORS   Solinas,F., Marconi,A.M., Ruzzi,M. and Zennaro,E.
  TITLE     Characterization and sequence of a novel insertion sequence,
            IS1162, from Pseudomonas fluorescens
  JOURNAL   Gene 155 (1), 77-82 (1995)
   PUBMED   7698671
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01695.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..39
                     /organism="Shigella dysenteriae"
                     /db_xref="taxon:622"
     Protein         <1..39
                     /product="ATP-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <1..39
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 tsamlgrilh hshvvqikge syrlrqkrka gviaeanpe
//
LOCUS       WP_235868290             460 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Pseudomonas ogarae].
ACCESSION   WP_235868290
VERSION     WP_235868290.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas ogarae
  ORGANISM  Pseudomonas ogarae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 460)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 460)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Pseudomonas ogarae"
                     /db_xref="taxon:1114970"
     Protein         1..460
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=50361
     Region          256..437
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(277,290..291,379,381,400,436)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:271184"
     Site            order(290,400,403,426,436)
                     /site_type="active"
                     /db_xref="CDD:271184"
ORIGIN      
        1 mnilaehslv tsavtnpalp lrpktrltkp yhyrrngiyy lriretgsvd rtvsvslktt
       61 drrramdasq hlsssiqafh ldhpqaswse lkehfrvisa elfeagsdgn vtqvwgglhd
      121 shsglmvdpr rqvqpladvp vsisvlapam tfealaalyl adrgqgqkas tlketkichg
      181 tisaalgeld mrthsradlv alrdrlsggr mpstvnklli klsavlawsv enghisksyd
      241 kklkltkgte ssrkaftqdq vgklvaysnm mpetswkrwl lslgaitggr lneisqltas
      301 diqtfesgit vihineigeg ksiknkrser lvplthgayg fdlaaflryv ettsrnadqs
      361 epshsvklaq igyktagdwa nrqaipealg ddhrpgltyh slrhslatlm qvkgipttha
      421 qavmghasgt vtfdtygagv pveviarmlk tllcpmhsnc
//
LOCUS       WP_235868302             375 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Vibrio paracholerae].
ACCESSION   WP_235868302
VERSION     WP_235868302.1
KEYWORDS    RefSeq.
SOURCE      Vibrio paracholerae
  ORGANISM  Vibrio paracholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Vibrio paracholerae"
                     /db_xref="taxon:650003"
     Protein         1..375
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=42100
     Region          <75..352
                     /region_name="GT4_Bme6-like"
                     /note="Brucella melitensis Bme6 and similar proteins;
                     cd03821"
                     /db_xref="CDD:340848"
     Site            order(187..189,253,274)
                     /site_type="other"
                     /note="putative ADP-binding pocket [chemical binding]"
                     /db_xref="CDD:340848"
ORIGIN      
        1 mneqfkctti vrdasrkggg iaavalplhh clnnmfsdan ficgidsgkd ivnktnvgrs
       61 glkslflpas afgrivhvhg iwtffdtvta ivakkrgakl visphgalep wafqskglkk
      121 riawylyqkr ilteadlliv nslqerdnlr rlglngpiav ipngiildgy dkqsamkser
      181 ekiilyfsrl dkkkgielli kawrkvknkr ghkihiqgyg desyrlylhe mvskfgldee
      241 iffinpsyde krwssfssas lyilpsysen fgitvaeali sglpsittte mpwedltneg
      301 igwsvkcnes aiaeaiteai gidesklalm rrravdyaek hfswetivqd yglayqwvls
      361 pdlesipksi tnsys
//
LOCUS       WP_235868390              54 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GTP-binding protein, partial [Vibrio].
ACCESSION   WP_235868390
VERSION     WP_235868390.1
KEYWORDS    RefSeq.
SOURCE      Vibrio
  ORGANISM  Vibrio
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae.
REFERENCE   1  (residues 1 to 54)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..54
                     /organism="Vibrio"
                     /db_xref="taxon:662"
     Protein         1..>54
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>54
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 mskekfertk phvnvgtigh vdhgkttlta aictvlakvy ggkardfasi dnap
//
LOCUS       WP_235868418             570 aa            linear   BCT 02-MAR-2025
DEFINITION  tail fiber protein [Shigella boydii].
ACCESSION   WP_235868418
VERSION     WP_235868418.1
KEYWORDS    RefSeq.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
REFERENCE   1  (residues 1 to 570)
  AUTHORS   Xue,Q. and Egan,J.B.
  TITLE     DNA sequence of tail fiber genes of coliphage 186 and evidence for
            a common ancestor shared by dsDNA phage fiber genes
  JOURNAL   Virology 212 (1), 128-133 (1995)
   PUBMED   7676622
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015371.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03406.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Shigella boydii"
                     /db_xref="taxon:621"
     Protein         1..570
                     /product="tail fiber protein"
                     /GO_process="GO:0019062 - virion attachment to host cell
                     [Evidence IEA]"
                     /GO_process="GO:0046718 - symbiont entry into host cell
                     [Evidence IEA]"
                     /calculated_mol_wt=59453
     Region          5..247
                     /region_name="COG5301"
                     /note="Phage-related tail fiber protein [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:444101"
     Region          261..298
                     /region_name="Phage_fiber_2"
                     /note="Phage tail fibre repeat; pfam03406"
                     /db_xref="CDD:427282"
ORIGIN      
        1 mstttrkfkt iitdtgakkl aqvaapdgkp vrlthmavgd gggtlptpds kqtrlvhevw
       61 rhtvnrvild athqnriiae lvippetggf wireigvfde hgdliavgnt aesykpavae
      121 gsgraqtfrt iltvsstatv altvdntmvm atvdyvddkl keheqsrrhp dasltakgfv
      181 qlssatnsvs etqaatpkav kaaydlangk ytaqdasttr kglvqlssat nstsetqaat
      241 pkavkaaydl anakytaqda ttaqkgivql ssatnstset laatskavka vmdetnkkap
      301 lnspaltgtp ttptarqgtn ntqiastafv maaiaalvds spdalntlne laaalgndpn
      361 fattmtnala gkqpkdatlt alaglataad rfpyftgndv aslatltkvg rdilakstva
      421 avieylglre lgtsgekipl lstantwtnr qtfsgglsge lsgnaatatk lktarkiagv
      481 gfdgssdisi saknvnafal rqtgntvngd tsigwnwdss aynaliggas tlilhfnina
      541 gscpavqfrv nyknggisyr sardgygvew
//
LOCUS       WP_235868431             133 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Shigella boydii].
ACCESSION   WP_235868431
VERSION     WP_235868431.1
KEYWORDS    RefSeq.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02371.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Shigella boydii"
                     /db_xref="taxon:621"
     Protein         <1..133
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <22..125
                     /region_name="COG3547"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442768"
ORIGIN      
        1 wrekqkssrg irrgqryrlv fqfpireqaa aflgvvpvek ysgtsvrgcp klskigppei
       61 raklylaslc glrfnplmka myerlclrgk akmcaigalm rklvhwcygv lktqkpfdvg
      121 ylssyarsac kaa
//
LOCUS       WP_235868433             433 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5710 domain-containing protein, partial [Shigella boydii].
ACCESSION   WP_235868433
VERSION     WP_235868433.1
KEYWORDS    RefSeq.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039512.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18974.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Shigella boydii"
                     /db_xref="taxon:621"
     Protein         1..>433
                     /product="DUF5710 domain-containing protein"
     Region          6..57
                     /region_name="DUF5710"
                     /note="Domain of unknown function (DUF5710); pfam18974"
                     /db_xref="CDD:436878"
     Region          66..>392
                     /region_name="COG4643"
                     /note="Uncharacterized domain associated with
                     phage/plasmid primase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:443681"
ORIGIN      
        1 mksryrtwla vppeeteavk navpplngrk avawdpekkl wyaragtels llerwlprpq
       61 elsmdagdpv tefaqvlena glviqglpqm dgaihrvatr ddkkgaksga yrayldgrpa
      121 gwyrdyrsad dsptnwvfsg geqhdplarl hlrafaqqqr ddnarklqqq ynkqagyars
      181 yinrlpqata heyltrkgir aapgvrlnnk nelvipfsng rgeirsyqri pvtggkdari
      241 lkdsektgnw ftfgtpengr pllfaegyat aaslheatgl pvlmtvdasn miavaenarq
      301 iwtdspfvfc adndhqrein kgvfsatkaa evtngeviip afteaekaqg ltdfndldas
      361 rgrdnfqnam naqlkhigip tpnsdtadhr eavvidnlif tpvkdekpqm spenrqstap
      421 etelatqdtp ydt
//
LOCUS       WP_235868456             133 aa            linear   BCT 02-MAR-2025
DEFINITION  DDE-type integrase/transposase/recombinase, partial [Shigella
            boydii].
ACCESSION   WP_235868456
VERSION     WP_235868456.1
KEYWORDS    RefSeq.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
REFERENCE   1  (residues 1 to 133)
  AUTHORS   Dyda,F., Hickman,A.B., Jenkins,T.M., Engelman,A., Craigie,R. and
            Davies,D.R.
  TITLE     Crystal structure of the catalytic domain of HIV-1 integrase:
            similarity to other polynucleotidyl transferases
  JOURNAL   Science 266 (5193), 1981-1986 (1994)
   PUBMED   7801124
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012870.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00665.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Shigella boydii"
                     /db_xref="taxon:621"
     Protein         <1..>133
                     /product="DDE-type integrase/transposase/recombinase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          1..>115
                     /region_name="PRK14702"
                     /note="insertion element IS2 transposase InsD;
                     Provisional"
                     /db_xref="CDD:237792"
ORIGIN      
        1 aeldgmpain akrvyrimrq nalllerkpa vppskrahtg rvavkesnqr wcsdgfefcc
       61 dngerlrvtf aldccdreal hwavttggfn setvqdvmlg averrfgndl psspvgkraa
      121 rtvltgmcys vgs
//
LOCUS       WP_235868457              36 aa            linear   BCT 02-MAR-2025
DEFINITION  lysis system i-spanin subunit Rz [Shigella boydii].
ACCESSION   WP_235868457
VERSION     WP_235868457.1
KEYWORDS    RefSeq.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
REFERENCE   1  (residues 1 to 36)
  AUTHORS   Zhang,N. and Young,R.
  TITLE     Complementation and characterization of the nested Rz and Rz1
            reading frames in the genome of bacteriophage lambda
  JOURNAL   Mol Gen Genet 262 (4-5), 659-667 (1999)
   PUBMED   10628848
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015218.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03245.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..36
                     /organism="Shigella boydii"
                     /db_xref="taxon:621"
     Protein         1..36
                     /product="lysis system i-spanin subunit Rz"
                     /GO_process="GO:0019835 - cytolysis [Evidence IEA]"
                     /GO_process="GO:0044659 - viral release from host cell by
                     cytolysis [Evidence IEA]"
                     /calculated_mol_wt=4055
     Region          <2..36
                     /region_name="Phage_lysis"
                     /note="Bacteriophage Rz lysis protein; cl22701"
                     /db_xref="CDD:451417"
ORIGIN      
        1 mdnatgprla dtaerdyfil rerlmtmqkq legaqd
//
LOCUS       WP_235868493             225 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2987 domain-containing protein [Vibrio ezurae].
ACCESSION   WP_235868493
VERSION     WP_235868493.1
KEYWORDS    RefSeq.
SOURCE      Vibrio ezurae
  ORGANISM  Vibrio ezurae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022652.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11205.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Vibrio ezurae"
                     /db_xref="taxon:252583"
     Protein         1..225
                     /product="DUF2987 domain-containing protein"
                     /calculated_mol_wt=25050
     Region          27..170
                     /region_name="DUF2987"
                     /note="Protein of unknown function (DUF2987); pfam11205"
                     /db_xref="CDD:431726"
ORIGIN      
        1 mhkgndsmkw rlftaallia glsnsayaqe ymftysklys plkhnlkqld sdvkvglfft
       61 nfatkqpcsi ekawmekeqh hedlriseng evnvpvddnl rsanplvyih tpanarcdys
      121 lvvltkkpff gnidhsqlev tatemqnllg dlggmfsswf apdiegvtle fipgvsteil
      181 lsngkvipvs eqgkailkls dlrdgvtadi pvktqrvmpy ikqqa
//
LOCUS       WP_235868590             486 aa            linear   BCT 02-MAR-2025
DEFINITION  VWA domain-containing protein, partial [Meridianimarinicoccus
            zhengii].
ACCESSION   WP_235868590
VERSION     WP_235868590.1
KEYWORDS    RefSeq.
SOURCE      Meridianimarinicoccus zhengii
  ORGANISM  Meridianimarinicoccus zhengii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Meridianimarinicoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024909.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13519.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Meridianimarinicoccus zhengii"
                     /db_xref="taxon:2056810"
     Protein         1..>486
                     /product="VWA domain-containing protein"
     Region          19..486
                     /region_name="bchD"
                     /note="magnesium chelatase subunit D; Provisional;
                     PRK13406"
                     /db_xref="CDD:237378"
ORIGIN      
        1 mtdparsadt taltrpgmag dwaraalald llavdpvglg gmhlrarpgp vrdavlarlg
       61 pvplpicklh ptmgdealfg gldltatlaa grpvqragll aeprllvltm aercpagmaa
      121 rlaahadtgs galvlldegl epeetapaal tdrlafalsl dgvgrqviat appadaagla
      181 aardrladta lpddaaaaiv tlaarmgvag lrapllalaa arahaalagr dlaseddiaa
      241 aatlvlvpra tqmpdapeet qddppppdpd drpddtpeds ddpgerlemp eellvdaiaa
      301 mlppellaam agrmgrasra atgsgagarr qgnrrgcplp srpgrpdsgh rvdlvatlra
      361 aapwqrlrre erpdapgivq lrprdirlrr fedrsdrlli favdasgsaa iarlaeakga
      421 vellladaya rrdhvaliaf rgtgaeellp ptrslvqtkr rlaglpgggg tplaaglrag
      481 leaala
//
LOCUS       WP_235868759             193 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Meridianimarinicoccus zhengii].
ACCESSION   WP_235868759
VERSION     WP_235868759.1
KEYWORDS    RefSeq.
SOURCE      Meridianimarinicoccus zhengii
  ORGANISM  Meridianimarinicoccus zhengii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Meridianimarinicoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024968.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13579.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Meridianimarinicoccus zhengii"
                     /db_xref="taxon:2056810"
     Protein         1..193
                     /product="glycosyltransferase"
                     /calculated_mol_wt=22236
     Region          24..>190
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mnrptsstsr iadirrsrpl dgrrvliive nlplpfdrrv wheartltaa gaqvavicpt
       61 gkgfeapyee ldgvhiyrhp lpldasgavg ylleygaalf hetrlawkil rrhgfdtiqg
      121 cnppdlifli awqfrifgkr yifdhhdinp elyeakfgrr gffwrlmvif ewlnfraarv
      181 vistnesyra ial
//
LOCUS       WP_235868487             177 aa            linear   BCT 02-MAR-2025
DEFINITION  tight adherence pilus pseudopilin TadF [Vibrio ezurae].
ACCESSION   WP_235868487
VERSION     WP_235868487.1
KEYWORDS    RefSeq.
SOURCE      Vibrio ezurae
  ORGANISM  Vibrio ezurae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 177)
  AUTHORS   Tomich,M., Fine,D.H. and Figurski,D.H.
  TITLE     The TadV protein of Actinobacillus actinomycetemcomitans is a novel
            aspartic acid prepilin peptidase required for maturation of the
            Flp1 pilin and TadE and TadF pseudopilins
  JOURNAL   J Bacteriol 188 (19), 6899-6914 (2006)
   PUBMED   16980493
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028274.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16964.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Vibrio ezurae"
                     /db_xref="taxon:252583"
     gene            1..177
                     /gene="tadF"
     Protein         1..177
                     /product="tight adherence pilus pseudopilin TadF"
                     /calculated_mol_wt=19602
     Region          9..172
                     /region_name="TadF"
                     /note="Putative tight adherence pilin protein F;
                     pfam16964"
                     /db_xref="CDD:435679"
ORIGIN      
        1 mkmhsrdlqk ggftveavfg mtvlvimmff iadltqmisa ktqasrvsys latatkersr
       61 ffegrhslnq adfdvineia adllqrqape krdgyglmve gytdagpnii pfsknldsge
      121 acepqtsiad lghlrpered gvtfpiyqvt vclkmegfsq yfpgmryvns ssvlpgr
//
LOCUS       WP_235868827             125 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Meridianimarinicoccus zhengii].
ACCESSION   WP_235868827
VERSION     WP_235868827.1
KEYWORDS    RefSeq.
SOURCE      Meridianimarinicoccus zhengii
  ORGANISM  Meridianimarinicoccus zhengii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Meridianimarinicoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02371.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Meridianimarinicoccus zhengii"
                     /db_xref="taxon:2056810"
     Protein         1..125
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=13572
     Region          <1..125
                     /region_name="COG3547"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442768"
ORIGIN      
        1 mtasgvgpit amevvatvdd asrfgrssna gaylgltprr ygsgeisrng rlskrgdgfi
       61 rkwlfeaant tfcrnpgspq lrhwakaiae rtgprkvkva larklavilh amwrtntpfr
      121 eiama
//
LOCUS       WP_235868914             133 aa            linear   BCT 02-MAR-2025
DEFINITION  glycine zipper family protein [Vibrio superstes].
ACCESSION   WP_235868914
VERSION     WP_235868914.1
KEYWORDS    RefSeq.
SOURCE      Vibrio superstes
  ORGANISM  Vibrio superstes
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13436.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Vibrio superstes"
                     /db_xref="taxon:198815"
     Protein         1..133
                     /product="glycine zipper family protein"
                     /calculated_mol_wt=13776
ORIGIN      
        1 mkrittvatl ltilplatya niivdtkgve qekyhadlye cqtyseqaeq kqtdslghdl
       61 vgstakgaal gaaggaisgg sgskgakvga gigiiggals hgaekkynee qheiaehdim
      121 rncmlgrgyt vln
//
LOCUS       WP_235868933             817 aa            linear   BCT 02-MAR-2025
DEFINITION  MMPL family transporter [Vibrio superstes].
ACCESSION   WP_235868933
VERSION     WP_235868933.1
KEYWORDS    RefSeq.
SOURCE      Vibrio superstes
  ORGANISM  Vibrio superstes
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 817)
  AUTHORS   Tekaia,F., Gordon,S.V., Garnier,T., Brosch,R., Barrell,B.G. and
            Cole,S.T.
  TITLE     Analysis of the proteome of Mycobacterium tuberculosis in silico
  JOURNAL   Tuber Lung Dis 79 (6), 329-342 (1999)
   PUBMED   10694977
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015155.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03176.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Vibrio superstes"
                     /db_xref="taxon:198815"
     Protein         1..817
                     /product="MMPL family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=89901
     Region          10..812
                     /region_name="HpnN"
                     /note="hopanoid biosynthesis associated RND transporter
                     like protein HpnN; TIGR03480"
                     /db_xref="CDD:274598"
ORIGIN      
        1 mqrftdtiir fpktlllflv mvtmvagyyg sthfsmnadl sdlveqkgew rdnldaveav
       61 fpdsgniiia vsskdgeqak iateklaqaf kkrqlfadvf apstlqwfeq yaigflsdne
      121 yqslrdkval llpevmlstq mnslqpylga ldeklsaser speeintliq plleamqdkd
      181 vdwqsllfsd vsvpngyvis ltavpdyset epnklimntv reviasvgmp advmvrvtgq
      241 taldydeiqd andsvalagt vslislilil avgirslrii vasylavivg lvwtfaagll
      301 lvgsfntisi vfmvifiglg vdfavhlslh vyeqrlkghd nreslalsvq hcisplglca
      361 lssaigflsf yptaynglge lgvisaagmi lalvatflvi plffqffgyp kvkrsnakrs
      421 kvalklsefi vaqhrkiilm tlvgavatgy gamqfqfdfs tlvlknknse svealqwlqd
      481 nklgssyqlf avakdrqqam dwesqlqdsp evaatisans flpqdfsqrv nelqesatpe
      541 akrptmmtws efskkyqqll nlsqasetns deqalqqhlt akiqplmqal asqdsaivdp
      601 kvdmlpaeia hkyiaddgqw lvsvtpsgdm rdvaqvnvfi etvqrvapla tgravaeqqv
      661 gqiivkafyt aiaisivait lilifsvryk ldilfifipl lltttttlal ahwfgqslnm
      721 aniiviplif glgvdngihi vkrfrheqti trffssstpk atliscltti atfgaltlae
      781 hqgmysigfl ltialsailc fsllilpafl hrfesrg
//
LOCUS       WP_235869009             483 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Photobacterium kishitanii].
ACCESSION   WP_235869009
VERSION     WP_235869009.1
KEYWORDS    RefSeq.
SOURCE      Photobacterium kishitanii
  ORGANISM  Photobacterium kishitanii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
REFERENCE   1  (residues 1 to 483)
  AUTHORS   Todone,F., Vanoni,M.A., Mozzarelli,A., Bolognesi,M., Coda,A.,
            Curti,B. and Mattevi,A.
  TITLE     Active site plasticity in D-amino acid oxidase: a crystallographic
            analysis
  JOURNAL   Biochemistry 36 (19), 5853-5860 (1997)
   PUBMED   9153426
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013434.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01266.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Photobacterium kishitanii"
                     /db_xref="taxon:318456"
     Protein         1..483
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=53551
     Region          <195..>263
                     /region_name="mnmC"
                     /note="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC; cl40718"
                     /db_xref="CDD:424349"
ORIGIN      
        1 mtslplsdsp itvgiigggi agstialrla eqginvqlfe egkslvngpp ichlhaggnl
       61 yreisdqqcl tlltqsidtl rvyqhtsnir ptviaipcnd agnpndllpr lellqrtyqa
      121 lvehdlknkv lgepkdyfkl yqrsdlerla lqdnpsqplt pdqwmipvak sinldqfkyp
      181 lvmvqeygls vfriaatltl alekltschv htstkvtsla ekstgwqvsy qdatnqrhqi
      241 hvdylvnagg yrtgtiddla hiprqrmvef kaayvthwsq cdaqwpevif hgergtpngm
      301 aqltpypdgf fqlhgmtqdi tlfknglvas nansaqpqld ssfkaklqqh wsqqeidqrt
      361 qrainhmaqf vnkfdqatvg gkplfgaqqi pgndptlraa dvsyshqrya rseivkassa
      421 lsvadaiieq latldliptp vpqtrenefp vahqlsqhdi vsyaekiaee rgfpislarp
      481 igh
//
LOCUS       WP_235869059             109 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Photobacterium kishitanii].
ACCESSION   WP_235869059
VERSION     WP_235869059.1
KEYWORDS    RefSeq.
SOURCE      Photobacterium kishitanii
  ORGANISM  Photobacterium kishitanii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
REFERENCE   1  (residues 1 to 109)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Photobacterium kishitanii"
                     /db_xref="taxon:318456"
     Protein         1..>109
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>109
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 mskekfervk phvnvgtigh vdhgkttlta aicttlakvy ggvakdfasi dnapeererg
       61 itistshvey dtptrhyahv dcpghadyvk nmitgaaqmd ggilvvaat
//
LOCUS       WP_235869026             601 aa            linear   BCT 02-MAR-2025
DEFINITION  MOSC N-terminal beta barrel domain-containing protein
            [Photobacterium kishitanii].
ACCESSION   WP_235869026
VERSION     WP_235869026.1
KEYWORDS    RefSeq.
SOURCE      Photobacterium kishitanii
  ORGANISM  Photobacterium kishitanii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
REFERENCE   1  (residues 1 to 601)
  AUTHORS   Anantharaman,V. and Aravind,L.
  TITLE     MOSC domains: ancient, predicted sulfur-carrier domains, present in
            diverse metal-sulfur cluster biosynthesis proteins including
            Molybdenum cofactor sulfurases
  JOURNAL   FEMS Microbiol Lett 207 (1), 55-61 (2002)
   PUBMED   11886751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015441.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03476.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Photobacterium kishitanii"
                     /db_xref="taxon:318456"
     Protein         1..601
                     /product="MOSC N-terminal beta barrel domain-containing
                     protein"
                     /calculated_mol_wt=67159
     Region          2..263
                     /region_name="YcbX"
                     /note="N-hydroxylaminopurine reductase subunit YcbX,
                     contains MOSC domain [Nucleotide transport and metabolism,
                     Defense mechanisms]; COG3217"
                     /db_xref="CDD:442450"
     Region          277..506
                     /region_name="FNR_iron_sulfur_binding_1"
                     /note="Iron-sulfur binding ferredoxin reductase (FNR)
                     proteins combine the FAD and NAD(P) binding regions of FNR
                     with an iron-sulfur binding cluster domain.
                     Ferredoxin-NADP+ (oxido)reductase is an FAD-containing
                     enzyme that catalyzes the reversible electron...; cd06215"
                     /db_xref="CDD:99811"
     Site            order(310,324..327,341..343,345,349..351,390,393,504,506)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99811"
     Site            order(324,326..327)
                     /site_type="other"
                     /note="FAD binding motif [chemical binding]"
                     /db_xref="CDD:99811"
     Site            order(348,351,354,361,369,371)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99811"
     Site            order(385,389..392,394)
                     /site_type="other"
                     /note="beta-alpha-beta structure motif"
                     /db_xref="CDD:99811"
     Site            order(390..391,416..418,479..480)
                     /site_type="other"
                     /note="NAD binding pocket [chemical binding]"
                     /db_xref="CDD:99811"
     Region          519..599
                     /region_name="Fdx"
                     /note="Ferredoxin [Energy production and conversion];
                     COG0633"
                     /db_xref="CDD:440398"
ORIGIN      
        1 mlsqiniypi kstqklslsh aivksagidi drrfmialtd gsmitsrryp qllqlttviq
       61 phgllfnfpn kaplsldftq ltqtqtstav wndsfqaytt seeanqwvse iigqpaqlly
      121 ngiesqrtgg kaqvkvsfad nfpvmiisea sldnlnartq qihsidkfra nlvvsgveaf
      181 aedswkriri geveleikap csrcvlvnyd pqtaqkavnn eplatlmtfr sdnaiptnvn
      241 fgmnaivvke giihqgdsve vlsyrtpeqy kdrrialtci krepiakdfv sfsfkaqqkk
      301 tlasyspgqy lpihisinnq ifercytlss splthqhyti svkkvdqgmv snwlhdnlqv
      361 gdniwsdtps gsfylepqke qntllisags gitpmmsmlr sliaekntqg lifyhycrtq
      421 adipfatela aierqhpeik ificltqqqd sthsfcgric aehfvslqsl anyhayvcgn
      481 arfsqttqel linqglpaah fyqeqfsqql avpeqqhsin iqfnqqqftg hnqaslldqi
      541 eaadlpikng craglcgrck vkviegevlq qpstalndhd kqqgmvlacc siptsnikis
      601 q
//
LOCUS       WP_235869035             703 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Photobacterium
            kishitanii].
ACCESSION   WP_235869035
VERSION     WP_235869035.1
KEYWORDS    RefSeq.
SOURCE      Photobacterium kishitanii
  ORGANISM  Photobacterium kishitanii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
REFERENCE   1  (residues 1 to 703)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 703)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 703)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 703)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 703)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 703)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 703)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 703)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 703)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Photobacterium kishitanii"
                     /db_xref="taxon:318456"
     Protein         1..703
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=80631
     Region          <277..>426
                     /region_name="NarQ"
                     /note="Signal transduction histidine kinase NarQ,
                     nitrate/nitrite-specific [Signal transduction mechanisms];
                     COG3850"
                     /db_xref="CDD:443059"
     Region          <510..694
                     /region_name="GGDEF"
                     /note="GGDEF domain, diguanylate cyclase (c-di-GMP
                     synthetase) or its enzymatically inactive variants [Signal
                     transduction mechanisms]; COG2199"
                     /db_xref="CDD:441801"
ORIGIN      
        1 mmklrlkssl allmltiavl pativgglll kqqsdveany ridmlarlsn tieqefdyrf
       61 sllstsldvl srdrlfvqai dnfflaghvn aslgslvknt plvqaaylid dqwseiesyn
      121 gihglssftk lkdvllhris knkakgrqwv fyynseslmp lkynpsrrgi iigvpifqsm
      181 tnglkrvplg ylivvvpien iikvlqpylk ngervvfqnn kmnnivisns kvdlhvptin
      241 kvikikldnk yiskpieytm kvymdkylgv npyikslkyi tffgvmivll affsagltyr
      301 wiarplgglm etvraysrge yqrsgrelrf aeffmvdrli rnmaktiqaq vadlavtnse
      361 lntaylekek anlqlvnfnd elerkvaekt lalsnslfre ehrrsmlqsl lsfshdlqtg
      421 diietvmtqv valyptagwa mktyadnknq wacenidkar leeneirpee hysdyyclpd
      481 gdeylhcfkv knsqneivgi ivmqyaklkr ddfevislfi rqlsaelegr llnselaria
      541 itdsltgian rkafdhdlee hiqlfnrypk rhfglfmldv nglkrandny ghhmgdalli
      601 ktsqllvetc ritdkvyrlg gdefaiilea gdrdscsvlw hrlekvreki nyaclpngeh
      661 vevhfavgys stdqnpadqv clvadkamyk dkrrfyektg ler
//
LOCUS       WP_235869063             300 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2279 domain-containing protein [Polaribacter aquimarinus].
ACCESSION   WP_235869063
VERSION     WP_235869063.1
KEYWORDS    RefSeq.
SOURCE      Polaribacter aquimarinus
  ORGANISM  Polaribacter aquimarinus
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021554.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10043.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Polaribacter aquimarinus"
                     /db_xref="taxon:2100726"
     Protein         1..300
                     /product="DUF2279 domain-containing protein"
                     /calculated_mol_wt=34086
     Region          81..152
                     /region_name="DUF2279"
                     /note="Predicted periplasmic lipoprotein (DUF2279);
                     cl11574"
                     /db_xref="CDD:448313"
ORIGIN      
        1 mikkktisff valfftfsfc aqntsffkks dtlhkkrrnt iviaksvlag gsllalhqlw
       61 ykdypqssfh fkndnndwkq mdkvghfmts yyvgkigmet ldwagvsktn qliygatygf
      121 afltaveild gfsrewgasp gdilanaagt glligqellw keqritvkys fnqtayakqr
      181 pntlgknylq qalkdyngqt ywlsaniwsf nkkgnfpkwl nvavgygadg mlfgsenpqn
      241 lslqspyrqf ylsldidlvk vptkskflks vfsvinfiki papsleintk gqvkfhylyf
//
LOCUS       WP_235869070             751 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Polaribacter aquimarinus].
ACCESSION   WP_235869070
VERSION     WP_235869070.1
KEYWORDS    RefSeq.
SOURCE      Polaribacter aquimarinus
  ORGANISM  Polaribacter aquimarinus
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14559.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Polaribacter aquimarinus"
                     /db_xref="taxon:2100726"
     Protein         1..751
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=87389
     Region          59..>81
                     /region_name="Cytochrome_C554"
                     /note="Cytochrome c554 and c-prime; pfam13435"
                     /db_xref="CDD:372604"
     Region          <222..>381
                     /region_name="decahem_SO1788"
                     /note="decaheme c-type cytochrome, OmcA/MtrC family;
                     TIGR03507"
                     /db_xref="CDD:274617"
     Region          326..349
                     /region_name="Paired_CXXCH_1"
                     /note="Doubled CXXCH motif (Paired_CXXCH_1); pfam09699"
                     /db_xref="CDD:462851"
     Region          <455..541
                     /region_name="HEAT"
                     /note="HEAT repeat [General function prediction only];
                     COG1413"
                     /db_xref="CDD:441023"
     Region          455..482
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          548..>748
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          576..600
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(607,610..611,614..615,617,641,644..645,648..649,
                     651..652,675,678..679,682..683,686)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          607..634
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          639..669
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          674..702
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          708..736
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mkiflnlmlq ntfvilvvsf ffisckktqe ykyqevdkge nvfltgkaip dnhflgdakc
       61 kechekeyqn wkgshhdkam qiadslsvlg nfnnqefisq gvtskfykkg gdfyvntegp
      121 dgknhnykiv yvfgitplqq yivkfpdghy qclrtawdvv knkwfdlypn fkvvhsewlh
      181 wsrgglnwnn mcadchstnv rknyresshs yntqysiinv nceachgpgk dhvinaekmg
      241 kdyiahgtlk mtkstkpkel vdecarchmr reqysehfnf egtlldhyfp qlleerlyqa
      301 dgqildevyv ygsflqskmy qndvtctnch nahslklkfn gnklcaqchv qekydspkhh
      361 fhrpntsssk cvnchmtgkf ymgndfrrdh sfrvprpdls lkygtpnacs echkdkddkw
      421 awksfiklfg evdsihfsek laagitnqth ghqglielmk dkrepeivra satkvlenyn
      481 aqnfveeyik mlnddsalvr gasidvlsri nntdytsyfl plledakrsi rikaffglat
      541 ldesqipliy qesyqkvkne fwahintnad fvgtrikrgd fyikknnlpk aiesyeeald
      601 idninnqvri nlaklyynnk qyeqaeeayk ivieqepkfg pvyyslglly aelnrvedai
      661 fqlqkaitim pknirvyynl allydkkqdf knaektffkg lkvdvnnesl lyalayiyak
      721 snqkvkakni vkqlislypn nqqyqnflnq l
//
LOCUS       WP_235869079            1080 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase [Polaribacter aquimarinus].
ACCESSION   WP_235869079
VERSION     WP_235869079.1
KEYWORDS    RefSeq.
SOURCE      Polaribacter aquimarinus
  ORGANISM  Polaribacter aquimarinus
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae.
REFERENCE   1  (residues 1 to 1080)
  AUTHORS   Miyata,T., Kashige,N., Satho,T., Yamaguchi,T., Aso,Y. and Miake,F.
  TITLE     Cloning, sequence analysis, and expression of the gene encoding
            Sphingomonas paucimobilis FP2001 alpha-L -rhamnosidase
  JOURNAL   Curr Microbiol 51 (2), 105-109 (2005)
   PUBMED   15991055
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17132.9
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Polaribacter aquimarinus"
                     /db_xref="taxon:2100726"
     Protein         1..1080
                     /product="glycosyl hydrolase"
                     /calculated_mol_wt=122669
     Region          35..873
                     /region_name="Glyco_hydro_106"
                     /note="alpha-L-rhamnosidase; pfam17132"
                     /db_xref="CDD:435739"
     Region          974..>1044
                     /region_name="LacZ"
                     /note="Beta-galactosidase/beta-glucuronidase [Carbohydrate
                     transport and metabolism]; COG3250"
                     /db_xref="CDD:442481"
ORIGIN      
        1 mlssvlflgl lscnssknte veklnyeiik snfanpteen nlwcywywin ddisksgitk
       61 dleamkkagi ggaligninp arkdgkvpml seewwshmvh avvegkrigv eigvfncpgw
      121 sqsggpwvds ekamryltfs etkveggklv nvklkqpnek fqdthtlafk takiekkstq
      181 fiptkvtanw ndldvkelid gntesdtrfk vqgkqaleit fnldesikar sisivpsqdf
      241 kckvelsaiv ngkervikkf tfdrykstpn vgpilkgaya ttlpdvkaqq fklkcsqfss
      301 rkktfgfaei tiseapvldk yiekqlgkmh ptpkpkwdty vfsrqeelqs kelgldpnqv
      361 idisnkiden gnlnwkapkg nwtvlrigms ptgtknapaa pqgvgyevdk mnsklvqyhf
      421 dnfvgellkr ipeesksafk yviadsyemg sqnwtddyev kfqekygydp vkylpvlsgr
      481 ivgsveeser flwdlrrsia ddvayeyvga lkkasnkhnl ktwlenyghw gfpgefmmyg
      541 gqsdlisgef wnegtlgnie ckassstsht ygkpitsaea ftssrktylr hpamlkkrgd
      601 wsltegvnhf vlhlyiqqpd dnrkpgmnaw fgtefnrhnt wfsqadtyfd ylrrcqhllq
      661 qgkyvadvcy figedapimt ggrvpeipkg ysydyinaev ilnrlsvkdg rfvlpdgmsy
      721 kvmvlppfkt mrpellkkie elvqqggvil gqkpekspsl qnypesdeiv ktiankmwsg
      781 tynqgkmdka fgkgkvldgy elsevfeklk laedvnvsed tpvlwthrtt pemdiyfitn
      841 qsdetielsp vfrvhkdlkp qlwdavsgei ralpefeitk tgvkiplqlk gaqswfivft
      901 kdnkllekpa stenfpafet iselknpfsv dfsnkeigpk epivfnaled wstseneqik
      961 yysgtatytt tftidklpkn kafylnlgkl svmakvklng kdlgglwiap yrlnisealk
     1021 kgenqleiev vnlwrnqlik dkqwseneky twlviddikp ksklqpsgll gpvsiemtkh
//
LOCUS       WP_235869114             875 aa            linear   BCT 02-MAR-2025
DEFINITION  putative LPS assembly protein LptD [Polaribacter aquimarinus].
ACCESSION   WP_235869114
VERSION     WP_235869114.1
KEYWORDS    RefSeq.
SOURCE      Polaribacter aquimarinus
  ORGANISM  Polaribacter aquimarinus
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040057.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19838.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Polaribacter aquimarinus"
                     /db_xref="taxon:2100726"
     Protein         1..875
                     /product="putative LPS assembly protein LptD"
                     /calculated_mol_wt=98834
     Region          205..675
                     /region_name="LptD_2"
                     /note="LptD protein; pfam19838"
                     /db_xref="CDD:466203"
ORIGIN      
        1 mcsllffqig fsqdkkstek kiittqkkds iidikkdsll ikkrdtiakd sikpkekved
       61 iivhvasdyt iqnakdktvt lyneanityt didlkagiii vdykkntlfa kgiidstgyi
      121 qrpiftqggq eseqdsiiyn fkskraliyg lktkqgemft ygektkrvnd stifvrkirf
      181 ttsekkipdy yiatdkaklv pgkkiivgts nlvladiptp lflpfayfpl setsvsgfli
      241 pafdtgssqr gigfqnggyy faisdyfdls vrgdlysngs wglrmssnyk kryrfsgsfn
      301 lsfennisgi rgfdsfsksn nfnirwshsq dskaspnsrf sasvnlgssr ffresqnqfn
      361 vsqtqtntfn ssinysktfv gtpfnmnlta thqqntntqe itmtlpsltl nmnriypfvg
      421 kggvkktpiq klgfnyamqg qylikttend fftskmfeta rsgmthktst ntnikafkyf
      481 tlspsanyee vwhfdyiqkn ydatqnvvvt dtlrgfksyr eynagvslst niygtfnfkk
      541 grlkairhtf rpsisysyrp dfkdkyiksv qrsvdpldle eytvfdqgif ggpsgglsns
      601 igitlnnvie akmapkdpds deedekitil nnlnfsssyn iaadslrwsp isfsagtrlf
      661 kdklalning smdvyqvden gsrinkfnsn ifrltnaslt anysissadf skdkkedknk
      721 nrdpnnsqdv igadinptdn igqrnavnss kedknksanl yradipwsvn laystnyrnn
      781 gisggeigvh slmfsgnlel spkwsvgyss gydikegaft fsrfnfsrdl dswqfnfnwv
      841 pfgtnssytf figvkssvla dlkwdknkpp drrlf
//
LOCUS       WP_235869166             178 aa            linear   BCT 02-MAR-2025
DEFINITION  metal ABC transporter solute-binding protein, Zn/Mn family [Veronia
            nyctiphanis].
ACCESSION   WP_235869166
VERSION     WP_235869166.1
KEYWORDS    RefSeq.
SOURCE      Veronia nyctiphanis
  ORGANISM  Veronia nyctiphanis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Veronia.
REFERENCE   1  (residues 1 to 178)
  AUTHORS   Ilari,A., Alaleona,F., Tria,G., Petrarca,P., Battistoni,A.,
            Zamparelli,C., Verzili,D., Falconi,M. and Chiancone,E.
  TITLE     The Salmonella enterica ZinT structure, zinc affinity and
            interaction with the high-affinity uptake protein ZnuA provide
            insight into the management of periplasmic zinc
  JOURNAL   Biochim Biophys Acta 1840 (1), 535-544 (2014)
   PUBMED   24128931
REFERENCE   2  (residues 1 to 178)
  AUTHORS   Gabbianelli,R., Scotti,R., Ammendola,S., Petrarca,P., Nicolini,L.
            and Battistoni,A.
  TITLE     Role of ZnuABC and ZinT in Escherichia coli O157:H7 zinc
            acquisition and interaction with epithelial cells
  JOURNAL   BMC Microbiol 11, 36 (2011)
   PUBMED   21338480
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 178)
  AUTHORS   Lee,Y.H., Deka,R.K., Norgard,M.V., Radolf,J.D. and Hasemann,C.A.
  TITLE     Treponema pallidum TroA is a periplasmic zinc-binding protein with
            a helical backbone
  JOURNAL   Nat Struct Biol 6 (7), 628-633 (1999)
   PUBMED   10404217
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013465.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01297.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Veronia nyctiphanis"
                     /db_xref="taxon:1278244"
     Protein         1..178
                     /product="metal ABC transporter solute-binding protein,
                     Zn/Mn family"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=19515
     Region          5..>107
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
ORIGIN      
        1 mrsrllrakv lcailfasmp lmasdisivt tvkpisliak diagdrgevv qllpngasph
       61 dyalkpsdlr kiksadlmiw vgpemelflr kitknhentl qltavkgfpl ryygdnaegh
      121 eghegheghe gheghegheg hegheghegh eghddghghh hhdgqmgtfg wvpiklll
//
LOCUS       WP_235869184             197 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6942 family protein [Veronia nyctiphanis].
ACCESSION   WP_235869184
VERSION     WP_235869184.1
KEYWORDS    RefSeq.
SOURCE      Veronia nyctiphanis
  ORGANISM  Veronia nyctiphanis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Veronia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047096.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22098.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Veronia nyctiphanis"
                     /db_xref="taxon:1278244"
     Protein         1..197
                     /product="DUF6942 family protein"
                     /calculated_mol_wt=21809
ORIGIN      
        1 mapafgrlhg ilsrqyveis eiplmsftal gdskaifsvy ieksppfeka igsplpleth
       61 yplatgdifa inqtggngwr kvfnvyakll falptthrsf pdafdswqsf rdasllqens
      121 gtalyfgnad ikenarfggl hiiagrthak qleiagecvw lsesfavhpd lpvficpyfd
      181 yrqlsnikie qlvkllg
//
LOCUS       WP_235868842             209 aa            linear   BCT 02-MAR-2025
DEFINITION  YceI family protein [Vibrio superstes].
ACCESSION   WP_235868842
VERSION     WP_235868842.1
KEYWORDS    RefSeq.
SOURCE      Vibrio superstes
  ORGANISM  Vibrio superstes
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 209)
  AUTHORS   Handa,N., Terada,T., Doi-Katayama,Y., Hirota,H., Tame,J.R.,
            Park,S.Y., Kuramitsu,S., Shirouzu,M. and Yokoyama,S.
  TITLE     Crystal structure of a novel polyisoprenoid-binding protein from
            Thermus thermophilus HB8
  JOURNAL   Protein Sci 14 (4), 1004-1010 (2005)
   PUBMED   15741337
REFERENCE   2  (residues 1 to 209)
  AUTHORS   Stancik,L.M., Stancik,D.M., Schmidt,B., Barnhart,D.M.,
            Yoncheva,Y.N. and Slonczewski,J.L.
  TITLE     pH-dependent expression of periplasmic proteins and amino acid
            catabolism in Escherichia coli
  JOURNAL   J Bacteriol 184 (15), 4246-4258 (2002)
   PUBMED   12107143
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016176.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04264.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Vibrio superstes"
                     /db_xref="taxon:198815"
     Protein         1..209
                     /product="YceI family protein"
                     /calculated_mol_wt=22235
     Region          16..209
                     /region_name="YceI"
                     /note="YceI-like domain; cl46459"
                     /db_xref="CDD:480799"
ORIGIN      
        1 mnntlthtmd ieekdmrpll tlcamlsisl fiplkaiaag hykvdskvst vsfatikkqy
       61 vvepavisgl sgnlddkgml svmvplknld tgvsirndrl nelffnaatf sdvkisaqvp
      121 aelmkgdrvi tqatipatvt lygktqtldf mlnivrvgei isvssvkpvi vdagsfgipk
      181 anlqavsktv gdiaisatva vnvslvlik
//
LOCUS       WP_235869131             376 aa            linear   BCT 02-MAR-2025
DEFINITION  SusE domain-containing protein [Polaribacter aquimarinus].
ACCESSION   WP_235869131
VERSION     WP_235869131.1
KEYWORDS    RefSeq.
SOURCE      Polaribacter aquimarinus
  ORGANISM  Polaribacter aquimarinus
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae.
REFERENCE   1  (residues 1 to 376)
  AUTHORS   Reeves,A.R., Wang,G.R. and Salyers,A.A.
  TITLE     Characterization of four outer membrane proteins that play a role
            in utilization of starch by Bacteroides thetaiotaomicron
  JOURNAL   J Bacteriol 179 (3), 643-649 (1997)
   PUBMED   9006015
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025650.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14292.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Polaribacter aquimarinus"
                     /db_xref="taxon:2100726"
     Protein         1..376
                     /product="SusE domain-containing protein"
                     /calculated_mol_wt=40728
     Region          25..130
                     /region_name="SusE"
                     /note="SusE outer membrane protein; pfam14292"
                     /db_xref="CDD:433843"
ORIGIN      
        1 mknikrfsal siigliliff qscedtsetf tistptspvl ealsfnkiel davntnnpav
       61 tlnwkksdyg vqaainyave iskddvftap vvasnvtgrn tvtlsvseln aaagnaglnp
      121 fewaniyiri vaslgtqgne qvisnvntle vypyfnyvfn dyflvgngva pgwnnnsnnp
      181 alfrdasdsn qfsytgyfkn dnsdynegrf kvletiglwq pqwgvsdneg sddfktegti
      241 agnpgtqsnd pgrfgvensg fytftinfat qkytmtpyna sgktspaslt lkgtstadva
      301 mtaltfdghi wyaksvklvp gevefvtdtg akwgsttsfs gvatdaggai pviveddydv
      361 wfndltgdyi liplnl
//
LOCUS       WP_235869360             634 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Veronia nyctiphanis].
ACCESSION   WP_235869360
VERSION     WP_235869360.1
KEYWORDS    RefSeq.
SOURCE      Veronia nyctiphanis
  ORGANISM  Veronia nyctiphanis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Veronia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024793.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13401.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Veronia nyctiphanis"
                     /db_xref="taxon:1278244"
     Protein         1..634
                     /product="AAA family ATPase"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=68037
     Region          27..151
                     /region_name="AAA_22"
                     /note="AAA domain; pfam13401"
                     /db_xref="CDD:379165"
     Region          <519..632
                     /region_name="DamX"
                     /note="Cell division protein DamX, binds to the septal
                     ring, contains C-terminal SPOR domain [Cell cycle control,
                     cell division, chromosome partitioning]; COG3266"
                     /db_xref="CDD:442497"
ORIGIN      
        1 mtstydmtpl eldtqvqlls rvqfltrfss nlirisgqeg agkswlseky leswasepiq
       61 sllicnqqqk dhqhrsiilg qlvrdgvfne qdtllqsleh mledrachll vvvddshlls
      121 dtvaaelwsv vqeaqqrqnw qinvllfgqt gmlngefsrl stikgqqplt ieisplsdse
      181 rdmfidvmmv nrqldaaqrr kvrqdaqslp slpgalkglg rqetsamedr kdtplwplml
      241 lalllivvga gsvwwfwpqs ddsqrnnali pqgideltef veklnqadde ssdssasant
      301 qpnsnqvvaq sdaanseevn teasnqqtsn vtavttglvg ttpntgtkat qtgdktvgrq
      361 tssgtsaakp ptsnaagtat nsantstkln vttvgitaag gsgvasssvg vsgsggsvtr
      421 qsgvntnsga vittpgqdga vgrdavyvna dqqteddfel peqlvqqgvt vgrggdenkr
      481 ivvpdtvvda iidqqaagsd gtaavnallp elanavsdvt qgtsqpkmtr vgfttelanq
      541 allqvsedrf alqlaalqsr eavdtfisel dlagkvnvye trrngdpwfm vllgdyasvt
      601 earkaglvlp ddiqalspwa kaftqihqei rrvn
//
LOCUS       WP_235869425             618 aa            linear   BCT 02-MAR-2025
DEFINITION  OPT/YSL family transporter [Parvibacter caecicola].
ACCESSION   WP_235869425
VERSION     WP_235869425.1
KEYWORDS    RefSeq.
SOURCE      Parvibacter caecicola
  ORGANISM  Parvibacter caecicola
            Bacteria; Bacillati; Actinomycetota; Coriobacteriia;
            Coriobacteriales; Coriobacteriaceae; Parvibacter.
REFERENCE   1  (residues 1 to 618)
  AUTHORS   Lubkowitz,M.A., Barnes,D., Breslav,M., Burchfield,A., Naider,F. and
            Becker,J.M.
  TITLE     Schizosaccharomyces pombe isp4 encodes a transporter representing a
            novel family of oligopeptide transporters
  JOURNAL   Mol Microbiol 28 (4), 729-741 (1998)
   PUBMED   9643541
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015148.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03169.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Parvibacter caecicola"
                     /db_xref="taxon:747645"
     Protein         1..618
                     /product="OPT/YSL family transporter"
                     /GO_function="GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=61157
     Region          11..616
                     /region_name="OPT"
                     /note="Predicted oligopeptide transporter, OPT family
                     [General function prediction only]; COG1297"
                     /db_xref="CDD:440908"
ORIGIN      
        1 mdsflaslrg qltlrgcvig ligcivitas svytalklga lpwpivfaai islfflralg
       61 srslneanvt htimssgamv agglaftipg awmlgladei sipeilvvtl ggvalglvct
      121 gllrcyfiee arlefpmgia aaetlkagsa ggkvgkklfg tmglaglyta lknfvpgipa
      181 iflgnvsipg vafgiynspm mlavgflvgt gavvawfvga vfanfgimvg gtaaglwtte
      241 aaggivsslg mglmmgcgft vilknilpag vralrrtlae rrgnaagadv eaagaagaaa
      301 snavalegee plvdqgasrc dgagasagsv vgacggaaih ggaaptaaas aprgvaglaa
      361 lltaaavlal clalgvhplv smavvaltfv ttamsaqsvg qtgidpmeif glivlllvaa
      421 fsataqaalf liaafvavac glagdvmndf kaghvlgtss aaqmtgqaig avvgsfvava
      481 vvvlllgayg pdafgvgkef vaaqasvvat mvsgvpsvea faigiaagma lqwaglpamm
      541 iglgvylpfy msftaflgam akatfdavqk rrqaglssdq raqrqadaqe tglvvasgvl
      601 ggesivgvil atlavfaa
//
LOCUS       WP_235869575             121 aa            linear   BCT 02-MAR-2025
DEFINITION  2Fe-2S iron-sulfur cluster-binding protein [Veronia nyctiphanis].
ACCESSION   WP_235869575
VERSION     WP_235869575.1
KEYWORDS    RefSeq.
SOURCE      Veronia nyctiphanis
  ORGANISM  Veronia nyctiphanis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Veronia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024900.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13510.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Veronia nyctiphanis"
                     /db_xref="taxon:1278244"
     Protein         1..121
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /calculated_mol_wt=13157
     Region          25..>95
                     /region_name="PRK07860"
                     /note="NADH dehydrogenase subunit G; Validated"
                     /db_xref="CDD:236118"
ORIGIN      
        1 mvehyiptqq dtmdfgtppv vdpdvgtvsl tidgwqvdvp egtsvmraaa mlniqipklc
       61 atdsldafgs crlcvveieg mrgkpaactt pvaegwwstp rmkqsrsydv mlwnsisqti
      121 h
//
LOCUS       WP_235869593             237 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: phage antirepressor KilAC domain-containing protein
            [Pseudomonas].
ACCESSION   WP_235869593
VERSION     WP_235869593.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
REFERENCE   1  (residues 1 to 237)
  AUTHORS   Iyer,L.M., Koonin,E.V. and Aravind,L.
  TITLE     Extensive domain shuffling in transcription regulators of DNA
            viruses and implications for the origin of fungal APSES
            transcription factors
  JOURNAL   Genome Biol 3 (3), RESEARCH0012 (2002)
   PUBMED   11897024
REFERENCE   2  (residues 1 to 237)
  AUTHORS   Heinrich,J., Velleman,M. and Schuster,H.
  TITLE     The tripartite immunity system of phages P1 and P7
  JOURNAL   FEMS Microbiol Rev 17 (1-2), 121-126 (1995)
   PUBMED   7669337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015340.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03374.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..237
                     /product="phage antirepressor KilAC domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=27063
     Region          1..237
                     /region_name="KilAC"
                     /note="Phage antirepressor protein YoqD, KilAC domain
                     [Mobilome: prophages, transposons]; COG3645"
                     /db_xref="CDD:442862"
ORIGIN      
        1 mttdlmmsns qectmqssel lalvnqares ygeravrrnd fisrcedele gehyetfvvk
       61 npnqtesrdl rlnldqclwv lmreskavrr svttrlnelr nqqrhipqsl pealrlaadl
      121 aeqnnslrlv vkeqepkvqa leriadakgt lcmtdaakhi gmqpkalidw lrenrwiyrr
      181 tgstrwiafe prlsqgllwh ktsvigvgdd geqrvasqvr vtprglvvla qklggrn
//
LOCUS       WP_235867371              49 aa            linear   BCT 02-MAR-2025
DEFINITION  small, acid-soluble spore protein, H family [Priestia abyssalis].
ACCESSION   WP_235867371
VERSION     WP_235867371.1
KEYWORDS    RefSeq.
SOURCE      Priestia abyssalis
  ORGANISM  Priestia abyssalis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
REFERENCE   1  (residues 1 to 49)
  AUTHORS   Cabrera-Hernandez,A., Sanchez-Salas,J.L., Paidhungat,M. and
            Setlow,P.
  TITLE     Regulation of four genes encoding small, acid-soluble spore
            proteins in Bacillus subtilis
  JOURNAL   Gene 232 (1), 1-10 (1999)
   PUBMED   10333516
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019751.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08141.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..49
                     /organism="Priestia abyssalis"
                     /db_xref="taxon:1221450"
     Protein         1..49
                     /product="small, acid-soluble spore protein, H family"
                     /GO_component="GO:0042601 - endospore-forming forespore
                     [Evidence IEA]"
                     /GO_process="GO:0030436 - asexual sporulation [Evidence
                     IEA]"
                     /calculated_mol_wt=5173
     Region          1..>40
                     /region_name="SspH"
                     /note="Small acid-soluble spore protein H family;
                     pfam08141"
                     /db_xref="CDD:462368"
ORIGIN      
        1 mnveraieil ssdqeiavhf hgipvwiesv vatsnmavvs ergpivkgs
//
LOCUS       WP_235869639             296 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF72 domain-containing protein [Pseudomonas].
ACCESSION   WP_235869639
VERSION     WP_235869639.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014017.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01904.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..296
                     /product="DUF72 domain-containing protein"
                     /calculated_mol_wt=33534
     Region          8..286
                     /region_name="DUF72"
                     /note="Protein of unknown function DUF72; cl00777"
                     /db_xref="CDD:469916"
ORIGIN      
        1 mavpdhnpil lgctqwsdpv wqgtlyssgs dadqrlaqyc svfaavegnt tfyslpgadr
       61 varwaelmpt dfrfcaklpr dishgsrlta dapalrdfft rmaplgqrlg piwlqlpqrf
      121 spartaelia fldalprdfd yavevrhldf frkdkneqhl nrqlhergie riifdtralf
      181 asddasaatl eakerkprlp vhavalsnrp avrfvggmdn sanlralepw lnkcaewlrs
      241 ghqpmifmht pdnrlapqla rlfyqqlqkr vpslpvmpcw pgeqeaamqp eqvdlf
//
LOCUS       WP_235869647             182 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: cyclophilin-like fold protein [Pseudomonas].
ACCESSION   WP_235869647
VERSION     WP_235869647.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037716.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18050.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..182
                     /product="cyclophilin-like fold protein"
                     /calculated_mol_wt=19385
     Region          61..182
                     /region_name="COG4925"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:443953"
ORIGIN      
        1 mkasfsttcc sqyyigrkkh pacsqrvfhg aallcglfvf gacaaaqpga sslrsaataa
       61 atvqpeeasm wmiigehrfa itladteaar efaamlplti nmsdlndnek haqlpralps
      121 nasrpktirn gdlmlygsst lvvfylsfns sysytrlghv ddpdglaqal gpgdanitfs
      181 kn
//
LOCUS       WP_235869665             572 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: tetratricopeptide repeat protein [Pseudomonas].
ACCESSION   WP_235869665
VERSION     WP_235869665.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14559.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..572
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=63312
     Region          <87..548
                     /region_name="PEP_TPR_lipo"
                     /note="putative PEP-CTERM system TPR-repeat lipoprotein;
                     TIGR02917"
                     /db_xref="CDD:274350"
     Region          122..150
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(123,126..127,130..131,133,157,160..161,164..165,
                     167..168,191,194..195,198..199,202)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          155..185
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          190..215
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          289..319
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          324..348
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          357..382
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          426..452
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(428..429,432..433,435,459,462..463,466..467,469,471,
                     494,497..498,501..502,505)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          457..488
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          493..519
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          527..554
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mkalsipspl llalgglllg gcsalstpep aapapavave kpaepveygq frqdtlydll
       61 taeiagqrnr fdialdnyiy qaretrdagv teramrvaef lgaekpaldm allwveldsq
      121 npealrsaai hlartgqheq amdmmqrald lhgethfdfl alaaaetdep trkallesls
      181 qmlqrhpent qlafakalll qqagrsqeal elleqhpgtd kapaaillhs rlviendpkr
      241 aqeilyrgle sfpadtrlrl llarmlvssg dyraastqya klvrdnpddp dlrlslglvy
      301 lelgdsaeav dqlqqvldtn pnnntaryhl gnaqlangdp daaletwqsi nsgtelltsr
      361 lqisqllvkq ghldalsell qkdreeypqh altlyqieie tladqpeqai ertnaalray
      421 pvessllytr amlneqlgns eaavqdlsti ierepdnama lnalgytlad rnerldeald
      481 llqraaalap ddpavrdslg wvhyrlgnld raeqllrdaf tnfpdqevaa hlgevlwrqg
      541 nkrearqvwk qgleqapdsq lipatrerle ae
//
LOCUS       WP_235869711             133 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6957 family protein [Pseudomonas].
ACCESSION   WP_235869711
VERSION     WP_235869711.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046722.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22275.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..133
                     /product="DUF6957 family protein"
                     /calculated_mol_wt=14762
ORIGIN      
        1 mdpiqrigdv lyglgeamqg tsmtdeeala yalnafadst fclvrdwiwl dldipdrlqg
       61 elqlagvkpv vmfahnivyd sarrwgesga fvrstalrsf segfvfqtrn tnylllgdgv
      121 rkrtdlktlg lli
//
LOCUS       WP_235869741             558 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: AMP-binding protein [Pseudomonas].
ACCESSION   WP_235869741
VERSION     WP_235869741.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
REFERENCE   1  (residues 1 to 558)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..558
                     /product="AMP-binding protein"
                     /calculated_mol_wt=60994
     Region          3..554
                     /region_name="PRK06178"
                     /note="acyl-CoA synthetase; Validated"
                     /db_xref="CDD:235724"
ORIGIN      
        1 mttlralqqa awpsdaptep vyplgeqplt rylqhwakks pnktaihfyg hqlsyaeldd
       61 lsnrfaally qqginpgdrv avfmpncpql hiafygilka gaihapvspm akgmelsyql
      121 ndsganaivc fdqllpvvrd iraetslqlv istslselcp aqppipvpdl lqapklpitd
      181 sidmlpalqt iapadnlpel nlddiaalny tggttglpkg cihthgdmly tcasflpval
      241 gldaerisln fmpefwiage nagllypvfa gttlvllarw daltfmsavq hyrvkqtgll
      301 vdsasevldh pqvsefdlss lettscvsfi kkltpeyrqr wraltgctlf etsfgmteth
      361 tcdtftaglq kdnfdlksap tfvglpvpgt efkvcdfatg dllplgsege lcvrtpsllk
      421 gywnkpeasa ealrdgwlht gdsgviteqg firylgrrke mlkvngmsvf pseleamlgq
      481 hpdilasavi grpdeqrgqm pvafiickpg snssaeslha wcksamaifk vpeirlvdtl
      541 pmtatgkvkk qelqdwin
//
LOCUS       WP_235869749             292 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: cache domain-containing protein [Pseudomonas].
ACCESSION   WP_235869749
VERSION     WP_235869749.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
REFERENCE   1  (residues 1 to 292)
  AUTHORS   Upadhyay,A.A., Fleetwood,A.D., Adebali,O., Finn,R.D. and
            Zhulin,I.B.
  TITLE     Cache Domains That are Homologous to, but Different from PAS
            Domains Comprise the Largest Superfamily of Extracellular Sensors
            in Prokaryotes
  JOURNAL   PLoS Comput Biol 12 (4), e1004862 (2016)
   PUBMED   27049771
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028509.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17200.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..292
                     /product="cache domain-containing protein"
                     /calculated_mol_wt=32444
     Region          <67..287
                     /region_name="dCache_2"
                     /note="Cache domain; pfam08269"
                     /db_xref="CDD:462414"
     Region          198..>284
                     /region_name="COG4564"
                     /note="Signal transduction histidine kinase [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:443621"
ORIGIN      
        1 mkmfarfilc alalstviaa ptyadtavap gyeeeaaras allqkavamy keegnaafak
       61 fsrqgeftdg dlyvyvldrn gymlaaggps aaligrdvsp lldeelkehl atalqqpdsd
      121 qihsdeyrwk nwrdgkverk rvyyqlyddk sfavgyfvnr sspaaaeqll ddaaqamqad
      181 aegtierinr ldpefnrddl yvfvadldsq tmvahgynrr lvgihfpdmk nregmlvgqk
      241 lidaanaget svsyvwpnpv tgnneeketh irkvgnylva vgyyqeirsa ge
//
LOCUS       WP_235869781             376 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: T6SS immunity protein Tli4 family protein
            [Pseudomonas].
ACCESSION   WP_235869781
VERSION     WP_235869781.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
REFERENCE   1  (residues 1 to 376)
  AUTHORS   Lu,D., Zheng,Y., Liao,N., Wei,L., Xu,B., Liu,X. and Liu,J.
  TITLE     The structural basis of the Tle4-Tli4 complex reveals the
            self-protection mechanism of H2-T6SS in Pseudomonas aeruginosa
  JOURNAL   Acta Crystallogr D Biol Crystallogr 70 (Pt 12), 3233-3243 (2014)
   PUBMED   25478841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037813.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18426.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..376
                     /product="T6SS immunity protein Tli4 family protein"
                     /calculated_mol_wt=42024
     Region          215..374
                     /region_name="Tli4_C"
                     /note="Tle cognate immunity protein 4 C-terminal domain;
                     pfam18426"
                     /db_xref="CDD:436493"
ORIGIN      
        1 mklklrfisf alltisaldv saaqrqeclg rftfdapeei ewatfnadrt mqisqggghd
       61 fsdmvaargd natygefgav iyvsdevdrs mlddvygyrr gssilyqdql rkdletdksi
      121 lkqlelgnyp aadideqiaq mdslktrial alptthdlgi pdayfvgsas apdeayiyrd
      181 nrvyaffmse ayaqgqgkea mldmmsrfrp relyevpdes gvcipygfia ddgdahysvk
      241 nslrftatpn vvfslvtasa hdpwdthpkt gtydtdyrpg fdaqkwtfrr fveptyigph
      301 lagmdgwrld pipgsgeqer gwfglaktgg llspliavqv ftfpkgtddl teftpppenv
      361 lprwkalset ieiren
//
LOCUS       WP_235869865             160 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail sheath subtilisin-like domain-containing protein
            [Veronia nyctiphanis].
ACCESSION   WP_235869865
VERSION     WP_235869865.1
KEYWORDS    RefSeq.
SOURCE      Veronia nyctiphanis
  ORGANISM  Veronia nyctiphanis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Veronia.
REFERENCE   1  (residues 1 to 160)
  AUTHORS   Xue,Q. and Egan,J.B.
  TITLE     Tail sheath and tail tube genes of the temperate coliphage 186
  JOURNAL   Virology 212 (1), 218-221 (1995)
   PUBMED   7676633
REFERENCE   2  (residues 1 to 160)
  AUTHORS   Temple,L.M., Forsburg,S.L., Calendar,R. and Christie,G.E.
  TITLE     Nucleotide sequence of the genes encoding the major tail sheath and
            tail tube proteins of bacteriophage P2
  JOURNAL   Virology 181 (1), 353-358 (1991)
   PUBMED   1825255
REFERENCE   3  (residues 1 to 160)
  AUTHORS   Arisaka,F., Ishimoto,L., Kassavetis,G., Kumazaki,T. and Ishii,S.
  TITLE     Nucleotide sequence of the tail tube structural gene of
            bacteriophage T4
  JOURNAL   J Virol 62 (3), 882-886 (1988)
   PUBMED   2963141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04984.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Veronia nyctiphanis"
                     /db_xref="taxon:1278244"
     Protein         1..160
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
                     /calculated_mol_wt=16948
     Region          1..>115
                     /region_name="COG3497"
                     /note="Phage tail sheath protein FI [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:442720"
ORIGIN      
        1 mapgftseqa vvadmmgiad rlraviiadg pstqdadaia yrqnfgsgrv yvvdpkakvf
       61 dtvsakesve pmsarvagli arsdndrgfw wspsnleiyg itgterpidf tsgipmpapi
      121 tstkmtwlls sekmafafgv taparvtpsg rscrsgapqt
//
LOCUS       WP_235869893             444 aa            linear   BCT 02-MAR-2025
DEFINITION  HAMP domain-containing protein [Veronia nyctiphanis].
ACCESSION   WP_235869893
VERSION     WP_235869893.1
KEYWORDS    RefSeq.
SOURCE      Veronia nyctiphanis
  ORGANISM  Veronia nyctiphanis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Veronia.
REFERENCE   1  (residues 1 to 444)
  AUTHORS   Aravind,L. and Ponting,C.P.
  TITLE     The cytoplasmic helical linker domain of receptor histidine kinase
            and methyl-accepting proteins is common to many prokaryotic
            signalling proteins
  JOURNAL   FEMS Microbiol Lett 176 (1), 111-116 (1999)
   PUBMED   10418137
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012876.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00672.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Veronia nyctiphanis"
                     /db_xref="taxon:1278244"
     Protein         1..444
                     /product="HAMP domain-containing protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=48669
     Region          108..>411
                     /region_name="NarQ"
                     /note="Signal transduction histidine kinase NarQ,
                     nitrate/nitrite-specific [Signal transduction mechanisms];
                     COG3850"
                     /db_xref="CDD:443059"
ORIGIN      
        1 mktgnlvysv ykeldyatnl idgpysesgi gqafkrmkqg iesdksgsvl vdyepylpsy
       61 napasfistp vylggnpiav liiqlpldqv sqvmskangl gvtgesylvg tdkklrsdtf
      121 hsekftvess frqnltvntp lienalnnlp egkdsslesv nyvgedtisi yspveiaegt
      181 twyvvveqqt vealaairnl qliylfvsia lvvivltvas rfgryiskpm qdlsnflvsl
      241 rkhwtfsara evhsndetgq aakalnamla sldnavkqis stmtqfaqgn fkqqidlklg
      301 gdlellknri ndsanvidet iedignvmse iqrgqfnkrv tvdakgqlal vkeqvnqsav
      361 ttaefisdar kvmdqlesgr ydqrvmanae gelaelkesi nqsianseai inqicnvmea
      421 msqgdfshsv tvkasgklne mkrl
//
LOCUS       WP_235869284             259 aa            linear   BCT 02-MAR-2025
DEFINITION  (2Fe-2S)-binding protein [Veronia nyctiphanis].
ACCESSION   WP_235869284
VERSION     WP_235869284.1
KEYWORDS    RefSeq.
SOURCE      Veronia nyctiphanis
  ORGANISM  Veronia nyctiphanis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Veronia.
REFERENCE   1  (residues 1 to 259)
  AUTHORS   Andrews,S.C.
  TITLE     Iron storage in bacteria
  JOURNAL   Adv Microb Physiol 40, 281-351 (1998)
   PUBMED   9889981
REFERENCE   2  (residues 1 to 259)
  AUTHORS   Quail,M.A., Jordan,P., Grogan,J.M., Butt,J.N., Lutz,M.,
            Thomson,A.J., Andrews,S.C. and Guest,J.R.
  TITLE     Spectroscopic and voltammetric characterisation of the
            bacterioferritin-associated ferredoxin of Escherichia coli
  JOURNAL   Biochem Biophys Res Commun 229 (2), 635-642 (1996)
   PUBMED   8954950
REFERENCE   3  (residues 1 to 259)
  AUTHORS   Garg,R.P., Vargo,C.J., Cui,X. and Kurtz,D.M. Jr.
  TITLE     A [2Fe-2S] protein encoded by an open reading frame upstream of the
            Escherichia coli bacterioferritin gene
  JOURNAL   Biochemistry 35 (20), 6297-6301 (1996)
   PUBMED   8639572
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016230.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04324.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Veronia nyctiphanis"
                     /db_xref="taxon:1278244"
     Protein         1..259
                     /product="(2Fe-2S)-binding protein"
                     /calculated_mol_wt=28209
     Region          <6..62
                     /region_name="MopB_CT"
                     /note="Molybdopterin-Binding, C-terminal (MopB_CT) domain
                     of the MopB superfamily of proteins, a large, diverse,
                     heterogeneous superfamily of enzymes that, in general,
                     bind molybdopterin as a cofactor. The MopB domain is found
                     in a wide variety of molybdenum-...; cl09929"
                     /db_xref="CDD:447861"
     Region          194..246
                     /region_name="Bfd"
                     /note="Bacterioferritin-associated ferredoxin [Inorganic
                     ion transport and metabolism]; COG2906"
                     /db_xref="CDD:442150"
ORIGIN      
        1 mksltgsgif rakvsatqne geifapihws kstsssatvc siinaacdpf sgqpefkitp
       61 vramsidvkt eavvvtaepi qterlnmaei vywskkkleh gylynissrh rqpdlcsalc
      121 kallkteqpm tfstssllrq infesgvcns tfeicedklt slgswqdeli glhsdhldah
      181 rfirgeagpn rsdiicackq isrsailnai dkdshtnvrs lssctsagtg cgscmselee
      241 ilaehrinnq ipikevgig
//
LOCUS       WP_235869939             141 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: phage tail protein [Enterobacteriaceae].
ACCESSION   WP_235869939
VERSION     WP_235869939.1
KEYWORDS    RefSeq.
SOURCE      Enterobacteriaceae (enterobacteria)
  ORGANISM  Enterobacteriaceae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   Linderoth,N.A., Julien,B., Flick,K.E., Calendar,R. and
            Christie,G.E.
  TITLE     Molecular cloning and characterization of bacteriophage P2 genes R
            and S involved in tail completion
  JOURNAL   Virology 200 (2), 347-359 (1994)
   PUBMED   8178426
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018586.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06891.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Enterobacteriaceae"
                     /db_xref="taxon:543"
     Protein         1..141
                     /product="phage tail protein"
                     /calculated_mol_wt=16102
     Region          6..119
                     /region_name="P2_Phage_GpR"
                     /note="P2 phage tail completion protein R (GpR);
                     pfam06891"
                     /db_xref="CDD:429177"
ORIGIN      
        1 mfdntgfdsw msdirllpae kdmglgqirm girqynavfd wqrwpwrqvd pdlllcallv
       61 wrdeqandyy sqleldapdv nieptddnia evtvsmplad piilipdeag fimmggiryr
      121 ldkpeiwvae nitvstirag k
//
LOCUS       WP_235869931              58 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA translocase FtsK 4TM domain-containing protein, partial
            [Shigella boydii].
ACCESSION   WP_235869931
VERSION     WP_235869931.1
KEYWORDS    RefSeq.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
REFERENCE   1  (residues 1 to 58)
  AUTHORS   Lowe,J., Ellonen,A., Allen,M.D., Atkinson,C., Sherratt,D.J. and
            Grainge,I.
  TITLE     Molecular mechanism of sequence-directed DNA loading and
            translocation by FtsK
  JOURNAL   Mol Cell 31 (4), 498-509 (2008)
   PUBMED   18722176
REFERENCE   2  (residues 1 to 58)
  AUTHORS   Sivanathan,V., Allen,M.D., de Bekker,C., Baker,R.,
            Arciszewska,L.K., Freund,S.M., Bycroft,M., Lowe,J. and
            Sherratt,D.J.
  TITLE     The FtsK gamma domain directs oriented DNA translocation by
            interacting with KOPS
  JOURNAL   Nat Struct Mol Biol 13 (11), 965-972 (2006)
   PUBMED   17057717
REFERENCE   3  (residues 1 to 58)
  AUTHORS   Massey,T.H., Mercogliano,C.P., Yates,J., Sherratt,D.J. and Lowe,J.
  TITLE     Double-stranded DNA translocation: structure and mechanism of
            hexameric FtsK
  JOURNAL   Mol Cell 23 (4), 457-469 (2006)
   PUBMED   16916635
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024882.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13491.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..58
                     /organism="Shigella boydii"
                     /db_xref="taxon:621"
     Protein         1..>58
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
     Region          1..>58
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
ORIGIN      
        1 msqeytedke vtltklssgr rlleallili vlfavwlmaa llsfnpsdps wsqtawhe
//
LOCUS       WP_235869979             140 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Shigella boydii].
ACCESSION   WP_235869979
VERSION     WP_235869979.1
KEYWORDS    RefSeq.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024870.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13479.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Shigella boydii"
                     /db_xref="taxon:621"
     Protein         1..140
                     /product="AAA family ATPase"
                     /calculated_mol_wt=15839
     Region          14..>124
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 malfqraint qaylkagimg fagdgktyta selaiglvml mrqrgieagn rpvmfldtet
       61 gsdwvkprfd aenielftak trsfvdllea ineaessgsv miidsishfw tglcdeyarr
      121 rnrkrglefs dwawlevywq
//
LOCUS       WP_235869980             258 aa            linear   BCT 02-MAR-2025
DEFINITION  M3 family metallopeptidase, partial [Shigella boydii].
ACCESSION   WP_235869980
VERSION     WP_235869980.1
KEYWORDS    RefSeq.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
REFERENCE   1  (residues 1 to 258)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013591.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01432.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Shigella boydii"
                     /db_xref="taxon:621"
     Protein         <1..258
                     /product="M3 family metallopeptidase"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          <1..257
                     /region_name="PRK10280"
                     /note="peptidyl-dipeptidase Dcp"
                     /db_xref="CDD:182353"
ORIGIN      
        1 gawmgnfveq stlnethpvi ynvcnyqkla agepalllwd dvitlfhefg htlhglfarq
       61 ryatlsgtnt prdfvefpsq inehwathpq vfaryarhyq sgaampdelq qkmrnaslfn
      121 kgyemsells aalldmrwhc leeneamqdv ddfelralva enmdlpaipp ryrssyfahi
      181 fgggyaagyy aylwtqmlad dgyqwfveqg gltrengqrf reailsrgns edlerlyrqw
      241 rgkapqimpm lqhrglni
//
LOCUS       WP_235870011             119 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Shigella boydii].
ACCESSION   WP_235870011
VERSION     WP_235870011.1
KEYWORDS    RefSeq.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Shigella boydii"
                     /db_xref="taxon:621"
     Protein         1..>119
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <1..119
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mggfsvfeig gvagmllagy lsvrlfrnsk pltntlflal tiilliaywy vpsgneylwl
       61 nytilillgl avygpvmfig lysmelvpke aagaasglsg tfsyifgsiv atlgmglvv
//
LOCUS       WP_235870019              77 aa            linear   BCT 02-MAR-2025
DEFINITION  IS1-like element transposase, partial [Shigella boydii].
ACCESSION   WP_235870019
VERSION     WP_235870019.1
KEYWORDS    RefSeq.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024169.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12759.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Shigella boydii"
                     /db_xref="taxon:621"
     Protein         <1..>77
                     /product="IS1-like element transposase"
     Region          1..>76
                     /region_name="transpos_IS1"
                     /note="IS1 family transposase; NF033558"
                     /db_xref="CDD:468085"
ORIGIN      
        1 sdevyrhgrs csrherfrcr sckrvfqlty syearkpgvk eqivemahng aggrdtartl
       61 kigintvirt lkssrpg
//
LOCUS       WP_235870050             123 aa            linear   BCT 02-MAR-2025
DEFINITION  prophage tail fiber N-terminal domain-containing protein, partial
            [Shigella boydii].
ACCESSION   WP_235870050
VERSION     WP_235870050.1
KEYWORDS    RefSeq.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019996.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08400.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Shigella boydii"
                     /db_xref="taxon:621"
     Protein         <1..>123
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
     Region          1..104
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
ORIGIN      
        1 galtdgagip msgcqiilks rvntsevvmr tradvvtgnn geysfeaqvg kycvylkrdw
       61 rdeycvgdia vyddskpgtl ndfltapdeg dlkpdvvkrf eemvaqaqqs agaaagnaqq
      121 taq
//
LOCUS       WP_235870056             403 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_235870056
VERSION     WP_235870056.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 403)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>403
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..>403
                     /region_name="PRK12316"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237054"
ORIGIN      
        1 mqellksvrs lsqkerkala allkrqgvnl ygitpvlkrs peeplqlsya qqrqwflwql
       61 epgsaayhip avlrlhgeld tealkrsfaa lverhevlrt tfrqegdetl qvvhddlple
      121 lreetmsgtd esalllried evllpfdler gpllrvlllr lsaeeqvlvv tlhhivsdgw
      181 stpimveell qfyagyregr aveleplpiq yadyalwqrs wmeagererq laywrqqlgg
      241 eqpxlelptd rprpsvqspa gdslqvelge dlgrslkqla qqqgvtlfml llasfqtllh
      301 rysgqpeirv gvpianrtrv eterligffv ntqvlkadfd letrfdvllq qvkrtaleaq
      361 ahqdlpfeql vealqpqrsl shsplfqvmy nhqnagqgka lel
//
LOCUS       WP_235870085             390 aa            linear   BCT 02-MAR-2025
DEFINITION  prephenate dehydrogenase/arogenate dehydrogenase family protein
            [Parvibacter caecicola].
ACCESSION   WP_235870085
VERSION     WP_235870085.1
KEYWORDS    RefSeq.
SOURCE      Parvibacter caecicola
  ORGANISM  Parvibacter caecicola
            Bacteria; Bacillati; Actinomycetota; Coriobacteriia;
            Coriobacteriales; Coriobacteriaceae; Parvibacter.
REFERENCE   1  (residues 1 to 390)
  AUTHORS   Shabalin,I.G., Gritsunov,A., Hou,J., Slawek,J., Miks,C.D.,
            Cooper,D.R., Minor,W. and Christendat,D.
  TITLE     Structural and biochemical analysis of Bacillus anthracis
            prephenate dehydrogenase reveals an unusual mode of inhibition by
            tyrosine via the ACT domain
  JOURNAL   FEBS J 287 (11), 2235-2255 (2020)
   PUBMED   31750992
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014234.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02153.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Parvibacter caecicola"
                     /db_xref="taxon:747645"
     Protein         1..390
                     /product="prephenate dehydrogenase/arogenate dehydrogenase
                     family protein"
                     /GO_function="GO:0008977 - prephenate dehydrogenase (NAD+)
                     activity [Evidence IEA]"
                     /GO_function="GO:0033730 - arogenate dehydrogenase (NADP+)
                     activity [Evidence IEA]"
                     /GO_function="GO:0070403 - NAD+ binding [Evidence IEA]"
                     /GO_process="GO:0006571 - tyrosine biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=41048
     Region          13..295
                     /region_name="TyrA"
                     /note="Prephenate dehydrogenase [Amino acid transport and
                     metabolism]; COG0287"
                     /db_xref="CDD:440056"
     Region          310..376
                     /region_name="ACT"
                     /note="ACT domains are commonly involved in specifically
                     binding an amino acid or other small ligand leading to
                     regulation of the enzyme; cl09141"
                     /db_xref="CDD:471857"
ORIGIN      
        1 meteqnrkas lgfesicvig lgligasfag aikaadpavn vvgvdthept latavekgwa
       61 drallpadsa laayladqcq lvviatpvaa vddyfrllad cnfsgvvtdt istkahilea
      121 aqlllpascd fipghpmags elsgiagara dlfkginwil cpdsatvpen fqhlhelitg
      181 iearvislpr eehdeavaiv shvphmvaac lmqlasnhsd dsqslmrlaa ggfkdttria
      241 agspklwcgi afdnaqalte gleemgsiir qfsdaleagd rgrftallqq asdarrslpa
      301 awvpstdkll evripminrn gvvaevttia saagcniqsi eidhisegna vlslvltdeg
      361 nvgklsidli nagysvsfsp lmvkehahve
//
LOCUS       WP_235869983              93 aa            linear   BCT 02-MAR-2025
DEFINITION  biofilm development regulator YmgB/AriR family protein [Shigella
            boydii].
ACCESSION   WP_235869983
VERSION     WP_235869983.1
KEYWORDS    RefSeq.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
REFERENCE   1  (residues 1 to 93)
  AUTHORS   Lee,J., Page,R., Garcia-Contreras,R., Palermino,J.M., Zhang,X.S.,
            Doshi,O., Wood,T.K. and Peti,W.
  TITLE     Structure and function of the Escherichia coli protein YmgB: a
            protein critical for biofilm formation and acid-resistance
  JOURNAL   J Mol Biol 373 (1), 11-26 (2007)
   PUBMED   17765265
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022255.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10798.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Shigella boydii"
                     /db_xref="taxon:621"
     Protein         1..93
                     /product="biofilm development regulator YmgB/AriR family
                     protein"
                     /GO_process="GO:0071468 - cellular response to acidic pH
                     [Evidence IEA]"
                     /calculated_mol_wt=10762
ORIGIN      
        1 mtepwgrkmh sdyynmvfge klanilykan sqffyernvi eeavnalfce reiinnknii
       61 kklmfflsdv nhtkkdvvqs alniiidits gdi
//
LOCUS       WP_235870001              42 aa            linear   BCT 02-MAR-2025
DEFINITION  phage anti-RecBCD protein, partial [Shigella boydii].
ACCESSION   WP_235870001
VERSION     WP_235870001.1
KEYWORDS    RefSeq.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
REFERENCE   1  (residues 1 to 42)
  AUTHORS   Murphy,K.C.
  TITLE     Bacteriophage P22 Abc2 protein binds to RecC increases the 5'
            strand nicking activity of RecBCD and together with lambda bet,
            promotes Chi-independent recombination
  JOURNAL   J Mol Biol 296 (2), 385-401 (2000)
   PUBMED   10669596
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022496.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11043.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..42
                     /organism="Shigella boydii"
                     /db_xref="taxon:621"
     Protein         <1..42
                     /product="phage anti-RecBCD protein"
ORIGIN      
        1 clkkeqmvvs aiastpqidk fpeyidprlr nyrsrygais nd
//
LOCUS       WP_235869998             103 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6258 family protein [Enterobacteriaceae].
ACCESSION   WP_235869998
VERSION     WP_235869998.1
KEYWORDS    RefSeq.
SOURCE      Enterobacteriaceae (enterobacteria)
  ORGANISM  Enterobacteriaceae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales.
REFERENCE   1  (residues 1 to 103)
  AUTHORS   Muller,S., Rachid,S., Hoffmann,T., Surup,F., Volz,C., Zaburannyi,N.
            and Muller,R.
  TITLE     Biosynthesis of crocacin involves an unusual hydrolytic release
            domain showing similarity to condensation domains
  JOURNAL   Chem Biol 21 (7), 855-865 (2014)
   PUBMED   24981773
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040040.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19772.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Enterobacteriaceae"
                     /db_xref="taxon:543"
     Protein         1..103
                     /product="DUF6258 family protein"
                     /calculated_mol_wt=11771
ORIGIN      
        1 msriaygtte wnfydnedle dgylvfsdvs ffnitpngsi pddyiisiit dnvnveyfes
       61 tivavgqipn tnsgdidnig ecqifirykh swienkfkek iie
//
LOCUS       WP_235870102             324 aa            linear   BCT 02-MAR-2025
DEFINITION  4Fe-4S binding protein [Parvibacter caecicola].
ACCESSION   WP_235870102
VERSION     WP_235870102.1
KEYWORDS    RefSeq.
SOURCE      Parvibacter caecicola
  ORGANISM  Parvibacter caecicola
            Bacteria; Bacillati; Actinomycetota; Coriobacteriia;
            Coriobacteriales; Coriobacteriaceae; Parvibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024211.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12801.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Parvibacter caecicola"
                     /db_xref="taxon:747645"
     Protein         1..324
                     /product="4Fe-4S binding protein"
                     /calculated_mol_wt=33196
     Region          24..292
                     /region_name="napH_"
                     /note="ferredoxin-type protein, NapH/MauN family;
                     TIGR02163"
                     /db_xref="CDD:274004"
ORIGIN      
        1 mmaaggsgrp ktaaaakgpr ritvarrlvq vaalalfclp vlaagwglfg tfsgteteva
       61 tpaqgpfygs lasssvagvt lldplavlem aaaaksfdpl wlvgalpvvl vyglvrgraf
      121 cgwvcpvnll gegadwlrgk lglpdggrpl prrakiamaa atvvlsalaa fplfqavspi
      181 gavnkglafg gfagaltlva vltcdllwkr rawcrslcpl gglyqvlgra gqlnvaisps
      241 ecthcgrcqk acladpsilq palsgqqlqv kagdcmacga cidacpsral rfqlgrrgkg
      301 pcsaaepfge ssaetvtmtv snrt
//
LOCUS       WP_235870160             618 aa            linear   BCT 02-MAR-2025
DEFINITION  OPT/YSL family transporter [Parvibacter caecicola].
ACCESSION   WP_235870160
VERSION     WP_235870160.1
KEYWORDS    RefSeq.
SOURCE      Parvibacter caecicola
  ORGANISM  Parvibacter caecicola
            Bacteria; Bacillati; Actinomycetota; Coriobacteriia;
            Coriobacteriales; Coriobacteriaceae; Parvibacter.
REFERENCE   1  (residues 1 to 618)
  AUTHORS   Lubkowitz,M.A., Barnes,D., Breslav,M., Burchfield,A., Naider,F. and
            Becker,J.M.
  TITLE     Schizosaccharomyces pombe isp4 encodes a transporter representing a
            novel family of oligopeptide transporters
  JOURNAL   Mol Microbiol 28 (4), 729-741 (1998)
   PUBMED   9643541
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015148.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03169.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Parvibacter caecicola"
                     /db_xref="taxon:747645"
     Protein         1..618
                     /product="OPT/YSL family transporter"
                     /GO_function="GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=61080
     Region          11..616
                     /region_name="OPT"
                     /note="Predicted oligopeptide transporter, OPT family
                     [General function prediction only]; COG1297"
                     /db_xref="CDD:440908"
ORIGIN      
        1 mdsflaslrg qltlrgcvig lvgcivitas svytalklga lpwpivfaai islfflralg
       61 srslneanvt htimssgamv agglaftipg awmlgladei sipeilvvtl ggvalglvct
      121 gllrryfiee arlefpmgia aaetlkagsa ggkvgkklfg tmglaglyta lknfvpgipa
      181 iflgnvsipg vafgiynspm mlavgflvgt gavmawfaga vfanfgimvg gtaaglwtte
      241 aaggivsslg mglmmgcgft vilknilpag vralrrtlae rrgnaagadv gaagaagaaa
      301 snavalegee plvgqgasrc dgagasagsi vgacggaaih ggaaptaaas aprgvaglaa
      361 llvataalal clalgvhplv svavvaltfv ttamsaqsvg qtgidpmeif glivlllvaa
      421 fsataqaalf liaafvavac glagdvmndf kaghvlgtss aaqmtgqaig avvgsfvava
      481 vvvlllgayg pdvfgvgkef vaaqasvvat mvsgvpsvea faigiaagma lqwaglpamm
      541 iglgvylpfy msftaflgam akatfdavqk rrqaglssdq raqrqadaqe tglvvasgvl
      601 ggesivgvil atlavfaa
//
LOCUS       WP_235870202             567 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding protein [Parvibacter caecicola].
ACCESSION   WP_235870202
VERSION     WP_235870202.1
KEYWORDS    RefSeq.
SOURCE      Parvibacter caecicola
  ORGANISM  Parvibacter caecicola
            Bacteria; Bacillati; Actinomycetota; Coriobacteriia;
            Coriobacteriales; Coriobacteriaceae; Parvibacter.
REFERENCE   1  (residues 1 to 567)
  AUTHORS   Mittl,P.R. and Schulz,G.E.
  TITLE     Structure of glutathione reductase from Escherichia coli at 1.86 A
            resolution: comparison with the enzyme from human erythrocytes
  JOURNAL   Protein Sci 3 (5), 799-809 (1994)
   PUBMED   8061609
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013086.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00890.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Parvibacter caecicola"
                     /db_xref="taxon:747645"
     Protein         1..567
                     /product="FAD-binding protein"
                     /calculated_mol_wt=61256
     Region          67..540
                     /region_name="SdhA"
                     /note="Succinate dehydrogenase/fumarate reductase,
                     flavoprotein subunit [Energy production and conversion];
                     COG1053"
                     /db_xref="CDD:440673"
ORIGIN      
        1 msetklsrrg flqgslmaga gmlaagalsg capkaqavph peaaaeqahs ywlgeepvva
       61 esdivdtrtt efliigagna gmvaaatasd lgldfivaek egcvgdtrey lgaintkysl
      121 evadpvdemk llneltryas grvdqrvikt wlnegkelve wltplmeaqg kelvvtpmka
      181 dhpaggtyyf aptiehayyp tyeypmrndi lewhiqeagh evsyhydlvk ldhdgnkvtg
      241 avfntpeglv rvnatkgtll atggyaanpe mvqaiqpfvp acctaasysl rcdgyglrag
      301 lwaggvkdvn gapvifdrga vlpgvdcgyv tdsdgtqhfp athyqvnigs qpflkvnrkg
      361 erfvneslpy dtlcnaasiq pggvwcqifd gnavedilrf gttgcaaytt afmqmgmpld
      421 dfigmdggwg mmqkanslde laallgfege ekqqlmatie hynqlveqge dtdfgkephr
      481 lskiieppfy gcwfggallt tidglrinqd mqmvtadnqv ieglyaagdv sgcffsdnyp
      541 eyivacacgr tctegrhvar llagdld
//
LOCUS       WP_235870214             222 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Parvibacter caecicola].
ACCESSION   WP_235870214
VERSION     WP_235870214.1
KEYWORDS    RefSeq.
SOURCE      Parvibacter caecicola
  ORGANISM  Parvibacter caecicola
            Bacteria; Bacillati; Actinomycetota; Coriobacteriia;
            Coriobacteriales; Coriobacteriaceae; Parvibacter.
REFERENCE   1  (residues 1 to 222)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 222)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Parvibacter caecicola"
                     /db_xref="taxon:747645"
     Protein         1..222
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=24997
     Region          <125..213
                     /region_name="PhnO"
                     /note="N-acetyltransferase, GNAT superfamily (includes
                     histone acetyltransferase HPA2) [Transcription, General
                     function prediction only]; COG0454"
                     /db_xref="CDD:440222"
ORIGIN      
        1 mtvefvpvkt dediarvakm ageiwneywp piigqaqtdy mvehfqslpa ftadvkdkgy
       61 eywfitared etpvelaqat gdaglqekgf sledaaenqy aieserdsll akeaigagre
      121 mpqlrivgyt gghgeedgrf fiskiylvkd qrgkglcset irfyealcrd rglhamyltv
      181 nkhndlgira ykgkgfevid avetnigegf vmddyimekk lr
//
LOCUS       WP_235870227             283 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramoyl-L-alanine amidase [Secundilactobacillus
            malefermentans].
ACCESSION   WP_235870227
VERSION     WP_235870227.1
KEYWORDS    RefSeq.
SOURCE      Secundilactobacillus malefermentans
  ORGANISM  Secundilactobacillus malefermentans
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Secundilactobacillus.
REFERENCE   1  (residues 1 to 283)
  AUTHORS   Kuroda,A., Sugimoto,Y., Funahashi,T. and Sekiguchi,J.
  TITLE     Genetic structure, isolation and characterization of a Bacillus
            licheniformis cell wall hydrolase
  JOURNAL   Mol Gen Genet 234 (1), 129-137 (1992)
   PUBMED   1495475
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013670.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01520.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Secundilactobacillus malefermentans"
                     /db_xref="taxon:176292"
     Protein         1..283
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /EC_number="3.5.1.28"
                     /GO_function="GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=32102
     Region          45..97
                     /region_name="SH3_3"
                     /note="Bacterial SH3 domain; pfam08239"
                     /db_xref="CDD:462405"
     Region          102..281
                     /region_name="AmiC"
                     /note="N-acetylmuramoyl-L-alanine amidase [Cell
                     wall/membrane/envelope biogenesis]; COG0860"
                     /db_xref="CDD:440621"
ORIGIN      
        1 minnkipfwk qplfilrvii ivglvyivgh ltiqyfcepk vaaqtinlrd mptpkghiie
       61 klaygtrlkv ekknvhtkww rvkvghhqgw vaswlihqtk yrainslaea tivldpghgg
      121 idsgtiglhg amektytlpt alavaqllrs kysrviltrq sdqsvslskr pkianmdkat
      181 lfisfhfnsa gkknaaqgfe vfqyhqnark laqklnnnfv nlplvnrgia fgdfevlrdn
      241 qrpavliemg fmdsthdfkh ikskiyqrlv ardvvrgitq yvh
//
LOCUS       WP_235870373             139 aa            linear   BCT 02-MAR-2025
DEFINITION  UPF0158 family protein [Siminovitchia fortis].
ACCESSION   WP_235870373
VERSION     WP_235870373.1
KEYWORDS    RefSeq.
SOURCE      Siminovitchia fortis
  ORGANISM  Siminovitchia fortis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Siminovitchia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015629.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03682.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Siminovitchia fortis"
                     /db_xref="taxon:254758"
     Protein         1..139
                     /product="UPF0158 family protein"
                     /calculated_mol_wt=16613
     Region          <39..138
                     /region_name="UPF0158"
                     /note="Uncharacterized protein family (UPF0158);
                     pfam03682"
                     /db_xref="CDD:308978"
ORIGIN      
        1 mqsyesntff nlktgdiiav dntalrkaed depydhlpdw qqeemkmaid ileneenyis
       61 lptqfdihey smmenfcysl pdedignell ssirgkgafr rfkekifylg ledkwyqfrd
      121 kcykdiaiew cenhdieyf
//
LOCUS       WP_235870315             126 aa            linear   BCT 02-MAR-2025
DEFINITION  antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein
            [Pseudomonas aeruginosa].
ACCESSION   WP_235870315
VERSION     WP_235870315.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 126)
  AUTHORS   Zhang,S.P., Feng,H.Z., Wang,Q., Kempher,M.L., Quan,S.W., Tao,X.,
            Niu,S., Wang,Y., Feng,H.Y. and He,Y.X.
  TITLE     Bacterial type II toxin-antitoxin systems acting through
            post-translational modifications
  JOURNAL   Comput Struct Biotechnol J 19, 86-93 (2020)
   PUBMED   33384857
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 126)
  AUTHORS   Freire,D.M., Gutierrez,C., Garza-Garcia,A., Grabowska,A.D.,
            Sala,A.J., Ariyachaokun,K., Panikova,T., Beckham,K.S.H., Colom,A.,
            Pogenberg,V., Cianci,M., Tuukkanen,A., Boudehen,Y.M., Peixoto,A.,
            Botella,L., Svergun,D.I., Schnappinger,D., Schneider,T.R.,
            Genevaux,P., de Carvalho,L.P.S., Wilmanns,M., Parret,A.H.A. and
            Neyrolles,O.
  TITLE     An NAD+ Phosphorylase Toxin Triggers Mycobacterium tuberculosis
            Cell Death
  JOURNAL   Mol Cell 73 (6), 1282-1291 (2019)
   PUBMED   30792174
REFERENCE   3  (residues 1 to 126)
  AUTHORS   Piscotta,F.J., Jeffrey,P.D. and Link,A.J.
  TITLE     ParST is a widespread toxin-antitoxin module that targets
            nucleotide metabolism
  JOURNAL   Proc Natl Acad Sci U S A 116 (3), 826-834 (2019)
   PUBMED   30598453
REFERENCE   4  (residues 1 to 126)
  AUTHORS   Skjerning,R.B., Senissar,M., Winther,K.S., Gerdes,K. and
            Brodersen,D.E.
  TITLE     The RES domain toxins of RES-Xre toxin-antitoxin modules induce
            cell stasis by degrading NAD+
  JOURNAL   Mol Microbiol 111 (1), 221-236 (2019)
   PUBMED   30315706
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021255.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09722.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..126
                     /product="antitoxin Xre/MbcA/ParS toxin-binding
                     domain-containing protein"
                     /calculated_mol_wt=13748
     Region          <51..125
                     /region_name="COG5642"
                     /note="Uncharacterized conserved protein, DUF2384 family
                     [Function unknown]"
                     /db_xref="CDD:444366"
ORIGIN      
        1 mhthimkgip iaqlakllrn gdidthaceq vspglalkkr ladrtttpgv spddrlsade
       61 sdrlyrvvht vvvaeflfgs rdkaqrwlsk pkdrfsgnsp lqmlastagt qlveelmtql
      121 aeglvl
//
LOCUS       WP_235870436             182 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase family protein, partial [Streptococcus pneumoniae].
ACCESSION   WP_235870436
VERSION     WP_235870436.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026041.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14690.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         1..>182
                     /product="transposase family protein"
     Region          31..>182
                     /region_name="transpos_ISL3"
                     /note="ISL3 family transposase; NF033550"
                     /db_xref="CDD:468079"
ORIGIN      
        1 meqlhfitkl ldikdpniqi ldiinkdthk eiiarldydt pscpecgsqm kkhdfqkpsk
       61 ipylettgmp trillrkrrf kcyhcskmmv aetsivkknh qipriinqki aqkliekism
      121 tdiahqlsis tstvirklnd fhfecnfrnl peimswdeya ftkgkmsfia qdfnnlniit
      181 vl
//
LOCUS       WP_235870438             150 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Streptococcus pneumoniae].
ACCESSION   WP_235870438
VERSION     WP_235870438.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 150)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 150)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 150)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 150)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..>150
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <3..150
                     /region_name="SunT"
                     /note="ABC-type bacteriocin/lantibiotic exporters, contain
                     an N-terminal double-glycine peptidase domain [Defense
                     mechanisms]; COG2274"
                     /db_xref="CDD:441875"
ORIGIN      
        1 kilsqnlgvv pqdsfllnrs ildnitlkne vtsqkieevc kavqiydeim ampmkfntii
       61 semgsnisgg qrqrialara linnpsivil deatsaldti neeritkyiq sqgctqiiia
      121 hrlstikdad iifvmkggki vesgnhkylm
//
LOCUS       WP_235870534             301 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5995 family protein [Rhodococcus xishaensis].
ACCESSION   WP_235870534
VERSION     WP_235870534.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus xishaensis
  ORGANISM  Rhodococcus xishaensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 301)
  AUTHORS   Heinzelmann,E., Berger,S., Muller,C., Hartner,T., Poralla,K.,
            Wohlleben,W. and Schwartz,D.
  TITLE     An acyl-CoA dehydrogenase is involved in the formation of the Delta
            cis3 double bond in the acyl residue of the lipopeptide antibiotic
            friulimicin in Actinoplanes friuliensis
  JOURNAL   Microbiology (Reading) 151 (Pt 6), 1963-1974 (2005)
   PUBMED   15942003
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039623.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19458.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Rhodococcus xishaensis"
                     /db_xref="taxon:2487364"
     Protein         1..301
                     /product="DUF5995 family protein"
                     /calculated_mol_wt=32368
     Region          70..>200
                     /region_name="DUF5995"
                     /note="Family of unknown function (DUF5995); pfam19458"
                     /db_xref="CDD:466095"
ORIGIN      
        1 mrarlfgdat iiasitalvl lspghvspgh astdstisva cgtpltanei ddvvelsdts
       61 tltdsglprl eaavdrhrqi teilvahrdw rglfsiglna veyeavlplq rdpaalpdrt
      121 wspevsydll arylrnvhae ftgtptdpaw anyfaltkqc sssparvama gynahltvdl
      181 ahavdssgtn penipdfyri vdsiavkgds ivtltkslyn gdlgplwrfy fvgegldllv
      241 gndqpsrtll raadsgynti tlahgfalqn pqvrgateqq idglwrvtds alqvlsdlgg
      301 l
//
LOCUS       WP_235870580             313 aa            linear   BCT 02-MAR-2025
DEFINITION  metal ABC transporter substrate-binding protein [Rhodococcus
            xishaensis].
ACCESSION   WP_235870580
VERSION     WP_235870580.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus xishaensis
  ORGANISM  Rhodococcus xishaensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10100136
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Rhodococcus xishaensis"
                     /db_xref="taxon:2487364"
     Protein         1..313
                     /product="metal ABC transporter substrate-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /calculated_mol_wt=32887
     Region          38..308
                     /region_name="PsaA"
                     /note="Metal binding protein PsaA. These proteins have
                     been shown to function as initial receptors in ABC
                     transport of Mn2+ and as surface adhesins in some
                     eubacterial species. They belong to the TroA superfamily
                     of periplasmic metal binding proteins that...; cd01137"
                     /db_xref="CDD:238557"
     Site            order(75,139,205,280)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:238557"
ORIGIN      
        1 mpnfavwgrg srvsiaalva avglsfsacs iaddggeadk pvvlttftvl adiagnvagd
       61 hlqvesitkv gaeihgyept pgdikkasra dlildnglnl eawfaqfveg ldvphivvse
      121 giepvgited ayaglpnpha wmspinvqty vdnmvtafsd ldpknasaye angdaykgql
      181 qqvqddlvaa lgalppnera lvtcegafsy lardagltek yiwavnaeqq atpkqiasai
      241 efvrtqqvpa vfcestvsda pmqqvvsatg aefggtlyvd slsepggpvp tyldlirhda
      301 etiiaglngg qrq
//
LOCUS       WP_235870609             358 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-propeller fold lactonase family protein [Rhodococcus
            xishaensis].
ACCESSION   WP_235870609
VERSION     WP_235870609.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus xishaensis
  ORGANISM  Rhodococcus xishaensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 358)
  AUTHORS   Kajander,T., Merckel,M.C., Thompson,A., Deacon,A.M., Mazur,P.,
            Kozarich,J.W. and Goldman,A.
  TITLE     The structure of Neurospora crassa 3-carboxy-cis,cis-muconate
            lactonizing enzyme, a beta propeller cycloisomerase
  JOURNAL   Structure 10 (4), 483-492 (2002)
   PUBMED   11937053
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021778.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10282.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Rhodococcus xishaensis"
                     /db_xref="taxon:2487364"
     Protein         1..358
                     /product="beta-propeller fold lactonase family protein"
                     /calculated_mol_wt=35032
     Region          23..293
                     /region_name="PQQ_ABC_repeats"
                     /note="PQQ-dependent catabolism-associated beta-propeller
                     protein; TIGR03866"
                     /db_xref="CDD:274824"
ORIGIN      
        1 mtsacimvlg magigagtav adtvidtipv gdfpsgvavn pfgfrayvan sdddsvsvid
       61 tvtntvvdtv tvgdsprava vspdgsrayv seadadtvsv ietvgntvsv tipvgdfptg
      121 vavspdgsrv yvaelfddsv svietvgntv vdtiplgaap tgvavspdgs rvyvannvgd
      181 tvsvidagts telttiavgn sprgvavtpd gsrvyvtnrl ddtvsvidtd tntvvdtvtv
      241 gdrpvrvavs pfgsrvyvtn llddsvsvie tagntvgeiv pvgdspigva iapfgsrayv
      301 tnsdgdtvsv iavercsgsl ciataslagg gstgsggtgs lvgggslgga gsagsags
//
LOCUS       WP_235870614             419 aa            linear   BCT 02-MAR-2025
DEFINITION  CoA transferase [Rhodococcus xishaensis].
ACCESSION   WP_235870614
VERSION     WP_235870614.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus xishaensis
  ORGANISM  Rhodococcus xishaensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 419)
  AUTHORS   Heider,J.
  TITLE     A new family of CoA-transferases
  JOURNAL   FEBS Lett 509 (3), 345-349 (2001)
   PUBMED   11749953
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014564.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02515.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Rhodococcus xishaensis"
                     /db_xref="taxon:2487364"
     Protein         1..419
                     /product="CoA transferase"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=44443
     Region          <74..>146
                     /region_name="CaiB"
                     /note="Crotonobetainyl-CoA:carnitine CoA-transferase CaiB
                     and related acyl-CoA transferases [Lipid transport and
                     metabolism]; COG1804"
                     /db_xref="CDD:441409"
     Region          179..>367
                     /region_name="CaiB"
                     /note="Crotonobetainyl-CoA:carnitine CoA-transferase CaiB
                     and related acyl-CoA transferases [Lipid transport and
                     metabolism]; COG1804"
                     /db_xref="CDD:441409"
ORIGIN      
        1 midfegylss clptdelawt avrtfraavd rlrraaglps agrpirperi aaafsgermf
       61 rwngaqvdaf aelsgffsta dgwvrihany qhhrrrilga vglpqdtdre rfaaqlarms
      121 asdvedravs vgaiatrvrt esdwaasvpg vaaasgdlvs vqvrsdhgrl rmptgdalla
      181 gvrvldltrv vagpvasrsl allgadvlri dppqmpeiew qhresgqgkr saridlraav
      241 gltqfrtllg dadilvtgyr pgaleslvga pgsvkpglih grvsawgesg pwagrrgfds
      301 ivqaasgiam iegadgkpga lpaqaldhas gyllasgvid alidargdga grdvsvslar
      361 taawllgrpn rrrsarparl pgadtavthg gittarpala efddypfpar awgsdpprw
//
LOCUS       WP_235870082             567 aa            linear   BCT 02-MAR-2025
DEFINITION  iron-sulfur cluster assembly scaffold protein [Parvibacter
            caecicola].
ACCESSION   WP_235870082
VERSION     WP_235870082.1
KEYWORDS    RefSeq.
SOURCE      Parvibacter caecicola
  ORGANISM  Parvibacter caecicola
            Bacteria; Bacillati; Actinomycetota; Coriobacteriia;
            Coriobacteriales; Coriobacteriaceae; Parvibacter.
REFERENCE   1  (residues 1 to 567)
  AUTHORS   Muhlenhoff,U., Gerber,J., Richhardt,N. and Lill,R.
  TITLE     Components involved in assembly and dislocation of iron-sulfur
            clusters on the scaffold protein Isu1p
  JOURNAL   EMBO J 22 (18), 4815-4825 (2003)
   PUBMED   12970193
REFERENCE   2  (residues 1 to 567)
  AUTHORS   Hwang,D.M., Dempsey,A., Tan,K.T. and Liew,C.C.
  TITLE     A modular domain of NifU, a nitrogen fixation cluster protein, is
            highly conserved in evolution
  JOURNAL   J Mol Evol 43 (5), 536-540 (1996)
   PUBMED   8875867
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01592.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Parvibacter caecicola"
                     /db_xref="taxon:747645"
     Protein         1..567
                     /product="iron-sulfur cluster assembly scaffold protein"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /GO_process="GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /calculated_mol_wt=62629
     Region          40..155
                     /region_name="IscU"
                     /note="Fe-S cluster assembly scaffold protein IscU, NifU
                     family [Posttranslational modification, protein turnover,
                     chaperones]; COG0822"
                     /db_xref="CDD:440584"
     Region          <440..562
                     /region_name="PRK09947"
                     /note="YdhW family putative oxidoreductase system protein"
                     /db_xref="CDD:182160"
ORIGIN      
        1 mkqkrrlsms dvrdvffqpa dravirtadv yqteiesgvd gysdtllavv anfrnsgrpe
       61 gfnaqsmvgk skrgevalri favidpetdt iqkagfktrg clamtaaast icsmiegktf
      121 pealsisedd irraldgvpw dksytltfav ealralygdw lqrngagltq lnalvpcdty
      181 spaclicehc slrnsrtdll vegvaaaqkr npaesnvaap sddrtstlag idlslsaasa
      241 dggvdnpada eteqaretna knrevlehna ialllqevrr asadshlsap newplldffp
      301 ehlsseefem mvyeyleehg ephdilqpvq rgqkalenph vksrfrtaks avgipkihla
      361 mtnrpneehp piaagkteee plfesalmpr nekpktregy vvdpdtglei pqgyqlkeie
      421 gelalvaveg aeapqamevd cngiralvgr hsyylydrtr mtdafarwaf laaendplvt
      481 laectreecr typrplaadt lanapfrmda ntvasafqqm qeledfsdie qvknsigety
      541 yysrdlmsre maeslaefyg verpasv
//
LOCUS       WP_235870701             391 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Rhodococcus xishaensis].
ACCESSION   WP_235870701
VERSION     WP_235870701.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus xishaensis
  ORGANISM  Rhodococcus xishaensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 391)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016777.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04909.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Rhodococcus xishaensis"
                     /db_xref="taxon:2487364"
     Protein         1..391
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=42035
     Region          103..389
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
ORIGIN      
        1 mapfsddtpr apgagsiaem vealplvdhh chgiaraple rtafesllse aaapgrwhgs
       61 lfdtqvgvav rrlcgpvldl dphaepdeyl erraelgvde vsrrllhaag iseflvdtgf
      121 qpeqlttpda laayagttar evvrlervae etiavcsagt faqecrarlg eaartaiafk
      181 siaayrvgld laperpsdaa vftaaarwls gvaagrpirl adetlirfli wtaidlglpi
      241 qfhvgygdtd inlartdpsl ltpllratad lgvpimllhn ypfhrhagyl aqvfdhvfvd
      301 vglavqnvgr ggaarilael lelapfgsvl fstdayglpe lfhvsavrfr ealvtvaeae
      361 vafgdwsegd amriarmigs gnanrayrle q
//
LOCUS       WP_235870754             370 aa            linear   BCT 02-MAR-2025
DEFINITION  thioesterase domain-containing protein, partial [Rhodococcus
            xishaensis].
ACCESSION   WP_235870754
VERSION     WP_235870754.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus xishaensis
  ORGANISM  Rhodococcus xishaensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 370)
  AUTHORS   Schneider,A. and Marahiel,M.A.
  TITLE     Genetic evidence for a role of thioesterase domains, integrated in
            or associated with peptide synthetases, in non-ribosomal peptide
            biosynthesis in Bacillus subtilis
  JOURNAL   Arch Microbiol 169 (5), 404-410 (1998)
   PUBMED   9560421
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013166.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00975.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Rhodococcus xishaensis"
                     /db_xref="taxon:2487364"
     Protein         <1..370
                     /product="thioesterase domain-containing protein"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <1..365
                     /region_name="entF"
                     /note="enterobactin non-ribosomal peptide synthetase EntF;
                     PRK10252"
                     /db_xref="CDD:236668"
ORIGIN      
        1 vtasekvdrk alppprwntr efrapttpvq qvvaavfadv lgidrvgldd dffalggnsl
       61 aatrvmarlr sdtgttvplq wlfsdptvea lasrivagve gpagegfgpv lpilesgaaa
      121 plfcihpsvg lswcymglaq rlegdipiyg vqspaileeg fvpesleela gryiseirav
      181 qpvgpyrllg wslggviaha maiqlqaige qvellammds fvgsngaedg spksitmsdl
      241 lggfgvdesv agstlsdlsl eavttefarl tgqsveraeq vlgrllstae rnarlmfeyc
      301 perfngdivf ftamtdddtg travrewdga vtgqvhnypv pathwqmtap gawavecpil
      361 rdvmggkrpe
//
LOCUS       WP_235870784             350 aa            linear   BCT 02-MAR-2025
DEFINITION  SIS domain-containing protein [Rhodococcus xishaensis].
ACCESSION   WP_235870784
VERSION     WP_235870784.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus xishaensis
  ORGANISM  Rhodococcus xishaensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 350)
  AUTHORS   Bateman,A.
  TITLE     The SIS domain: a phosphosugar-binding domain
  JOURNAL   Trends Biochem Sci 24 (3), 94-95 (1999)
   PUBMED   10203754
REFERENCE   2  (residues 1 to 350)
  AUTHORS   Teplyakov,A., Obmolova,G., Badet-Denisot,M.A., Badet,B. and
            Polikarpov,I.
  TITLE     Involvement of the C terminus in intramolecular nitrogen channeling
            in glucosamine 6-phosphate synthase: evidence from a 1.6 A crystal
            structure of the isomerase domain
  JOURNAL   Structure 6 (8), 1047-1055 (1998)
   PUBMED   9739095
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013539.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01380.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Rhodococcus xishaensis"
                     /db_xref="taxon:2487364"
     Protein         1..350
                     /product="SIS domain-containing protein"
                     /GO_function="GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA]"
                     /GO_process="GO:1901135 - carbohydrate derivative
                     metabolic process [Evidence IEA]"
                     /calculated_mol_wt=36465
     Region          4..338
                     /region_name="agaS_fam"
                     /note="putative sugar isomerase, AgaS family; TIGR02815"
                     /db_xref="CDD:131862"
ORIGIN      
        1 magfigplla radlrviltg agtssfvgqi aapalaqaln rrvealattd ivsnpqaqla
       61 edvptllvsv arsgrspesv aatrladecl sevrhlvvtc dptgdlyqeh qrrdgsmvvl
      121 mparandegf amtssfssml lscllilgpg dqsavealvg aaekilatwq erigvlaqrg
      181 yervvylgsg altglaresa lkmleltagk ivtyhdsalg frhgpkavid dhtlvvvyis
      241 sdpytrqydl divaelrags npdsviavaa epispalgda wvlggvagvg dsllaagyvv
      301 vaqllglsfa lhagttpdnp fpagdvnrvv kgvtihplpv iveastkakr
//
LOCUS       WP_235870795             556 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent monooxygenase [Rhodococcus xishaensis].
ACCESSION   WP_235870795
VERSION     WP_235870795.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus xishaensis
  ORGANISM  Rhodococcus xishaensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 556)
  AUTHORS   Schreuder,H.A., van der Laan,J.M., Swarte,M.B., Kalk,K.H., Hol,W.G.
            and Drenth,J.
  TITLE     Crystal structure of the reduced form of p-hydroxybenzoate
            hydroxylase refined at 2.3 A resolution
  JOURNAL   Proteins 14 (2), 178-190 (1992)
   PUBMED   1409567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01494.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Rhodococcus xishaensis"
                     /db_xref="taxon:2487364"
     Protein         1..556
                     /product="FAD-dependent monooxygenase"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /calculated_mol_wt=61116
     Region          14..538
                     /region_name="PRK06184"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:235728"
ORIGIN      
        1 mksqmiraen kvpvvivgag ptgltaavel srlginvriv dkaprrsdts ralaiqartv
       61 ellrpravge emlrlgnpvs attlyakgrk ladvelyrmp sefnyillla qseterilad
      121 qcarqgvkie rgvelisvtq nhqaakthdd ntvevllrsa dgtderveas yliaadgahs
      181 ptrkalglnf egtsftqkya lgdlhlagel aedqmsvfla prgfiavfpm gegrfrftat
      241 dpdgiageaa eptlkdiqrl ydrvshvpat lynlnwssrf rinsrhmstl ragrvffggd
      301 aahvhspagg qgmntgiqdm inlswklamv lktqakpell dtyqtdrlpv ikqvvhmtrr
      361 mtrvvnstnp lvhtaltrlt prlltrsatq dkvtprlgql tatyrncpia khagrigdlr
      421 agdrvpdmdl htvedeqtkt gppgagrcrh lydmqdlsgl tlfitaadsa iddsyrpfrh
      481 litvhrvria tsqprlrgsd adiaerlaaq pgwmlvrpdg ylaaaghptd aatltrwleq
      541 wfirnvtvak satsts
//
LOCUS       WP_235870808             483 aa            linear   BCT 02-MAR-2025
DEFINITION  Fic family protein [Sphingobium indicum].
ACCESSION   WP_235870808
VERSION     WP_235870808.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium indicum
  ORGANISM  Sphingobium indicum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (residues 1 to 483)
  AUTHORS   Garcia-Pino,A., Christensen-Dalsgaard,M., Wyns,L., Yarmolinsky,M.,
            Magnuson,R.D., Gerdes,K. and Loris,R.
  TITLE     Doc of prophage P1 is inhibited by its antitoxin partner Phd
            through fold complementation
  JOURNAL   J Biol Chem 283 (45), 30821-30827 (2008)
   PUBMED   18757857
REFERENCE   2  (residues 1 to 483)
  AUTHORS   Lehnherr,H., Maguin,E., Jafri,S. and Yarmolinsky,M.B.
  TITLE     Plasmid addiction genes of bacteriophage P1: doc, which causes cell
            death on curing of prophage, and phd, which prevents host death
            when prophage is retained
  JOURNAL   J Mol Biol 233 (3), 414-428 (1993)
   PUBMED   8411153
REFERENCE   3  (residues 1 to 483)
  AUTHORS   Komano,T., Utsumi,R. and Kawamukai,M.
  TITLE     Functional analysis of the fic gene involved in regulation of cell
            division
  JOURNAL   Res Microbiol 142 (2-3), 269-277 (1991)
   PUBMED   1656497
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014691.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02661.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Sphingobium indicum"
                     /db_xref="taxon:332055"
     Protein         1..483
                     /product="Fic family protein"
                     /calculated_mol_wt=54028
     Region          157..>352
                     /region_name="COG3177"
                     /note="Fic family protein [Transcription]"
                     /db_xref="CDD:442410"
ORIGIN      
        1 mpytesylva garrtevigs rtvefyprsy atgddivanl rfalryepld lgvlvatffa
       61 mdaevvaawv rtepsgsyar rawffyeylt gkrldvpdaa agnyvealdp qkhvvagrrn
      121 ssrhrvidnl lgtpdlcptv rrtaklegqi glhidaeara iidgfdqavl aravrhlftk
      181 etrasfaieg eapspdrter fvaalrsasr fdtgdkeaiv rlqnaivdrr yaatdwrsfq
      241 nfvgettvdl reevyficpr pedvpslmtg wmaltermla dgiesvvaaa vsafafvfih
      301 pfedgngrih rfvvhhvlsk tgfspdtmif pvsaaivrdq rsydavlesf stpllsainw
      361 gwtsereiav rndtallyrf fdatslaeyl ydrvvdavrt dlreelgfqa mferamegvr
      421 tivdmpdrra allirlmlqn ggrlskskrg qfeeltdpei aameqavqga vaeapkaiig
      481 mrk
//
LOCUS       WP_235870829             502 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Sphingobium indicum].
ACCESSION   WP_235870829
VERSION     WP_235870829.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium indicum
  ORGANISM  Sphingobium indicum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (residues 1 to 502)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Sphingobium indicum"
                     /db_xref="taxon:332055"
     Protein         1..502
                     /product="AMP-binding protein"
                     /calculated_mol_wt=54904
     Region          40..486
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(152,155..160,162..163)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(155,268..269,291..296,374,386,389,400,478)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(155,192..193,239,241..242,245,268..269,291..296,374,
                     386,389,397..400,459)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(192,241..242,245,268,397..399,453,459)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
ORIGIN      
        1 mlrpamdyrq mqysigdcir ywaerladep aivdeageis wrdldrstnr larayrdagv
       61 gegdfvtiml pngrefyqas iaawkvgaip qpisarmppa ersaiidivs prlivgsege
      121 qtsvpqlpag flpdpalsde amdypappyw kavasggstg rpkvivsrqp gifdplapef
      181 rmsvqgrqlv agplyhnasf mcssrglfcg nrlivmerfd aeraldlidr hridwtimvp
      241 tmmhriarlp aevrdrhdis slrtvvhtaa pcppwlkaew iewlgadvvq eayggtegcg
      301 ttwisgeewl arpgsvgrav egcaikvvdd agqpvpagvi gevymrpdsg pgstyfylgg
      361 esrrsedgwe tigdmghvde egylfladrr tdliisggan vypaeveaai dafpgvrssa
      421 viglpdddlg nrvhaiidaa tqidpealkr hlaerivryk iprtfefvad svrdeagkvr
      481 rsalraarmd gsdnkagaan ra
//
LOCUS       WP_235870832             339 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Sphingobium indicum].
ACCESSION   WP_235870832
VERSION     WP_235870832.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium indicum
  ORGANISM  Sphingobium indicum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (residues 1 to 339)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 339)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Sphingobium indicum"
                     /db_xref="taxon:332055"
     Protein         1..339
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=36138
     Region          <28..315
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(28..30,56,109,140,169,171..172,180)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:99734"
     Site            order(31,66,133,178..180,216,219)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:99734"
     Site            172
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99734"
ORIGIN      
        1 masaswrrcs qtcppwptag fpssrrrggt gayrlglela afrspasrli vgtptwpnhi
       61 pvaeraglrs vtyrhydpat gtvdfdamme avsdarpgdl fllhgcchnp tgaalspaqw
      121 aeladallea kllplidlay agmarglved aagtrclldr lpeaiiaisc sksfglyser
      181 tgmlavmaas psaagacrlt aetfarslws nppdhgaaiv rtilgdegmr anwlaeldam
      241 rhrlagirsr laasglpgte piaaqeglfa mmpfdsgria amrekhavym dmsgriniag
      301 lnagnidrfl hacrdmshpa nrraepnssl rdvasatqv
//
LOCUS       WP_235870776             286 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5996 family protein [Rhodococcus xishaensis].
ACCESSION   WP_235870776
VERSION     WP_235870776.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus xishaensis
  ORGANISM  Rhodococcus xishaensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 286)
  AUTHORS   Watanabe,K., Hotta,K., Nakaya,M., Praseuth,A.P., Wang,C.C.,
            Inada,D., Takahashi,K., Fukushi,E., Oguri,H. and Oikawa,H.
  TITLE     Escherichia coli allows efficient modular incorporation of newly
            isolated quinomycin biosynthetic enzyme into echinomycin
            biosynthetic pathway for rational design and synthesis of potent
            antibiotic unnatural natural product
  JOURNAL   J Am Chem Soc 131 (26), 9347-9353 (2009)
   PUBMED   19514719
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039315.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19459.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Rhodococcus xishaensis"
                     /db_xref="taxon:2487364"
     Protein         1..286
                     /product="DUF5996 family protein"
                     /calculated_mol_wt=31931
     Region          1..277
                     /region_name="DUF5996"
                     /note="Family of unknown function (DUF5996); pfam19459"
                     /db_xref="CDD:466096"
ORIGIN      
        1 mwtqivgkvr lahtplvnhw wqvplyvspr glttsaiphg nrvfdiefdl sghqltirds
       61 ngahrefple pmpvsdffhr vmqalqelgi etriqatpne vdpaipfaed tvhasydpaa
      121 anlfwkqliq adrvihefrs nfagkvspvh ffwggfdlac trfsgrpapq hpggapnvgt
      181 wvmvegyshe lsscgfwpgg ggegafyaya ypepegfadh pvlpeqafys adfgqfllpy
      241 esvrtsadpd atlqrflqtt yeaaadnapw draalecdpr rwdser
//
LOCUS       WP_235870912             155 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_235870912
VERSION     WP_235870912.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 155)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..155
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..154
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            1..31
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 llalnaaiea arageagrgf avvadevrnl ahraqesaqq iqkmieelqv gareavatmt
       61 esqryslesv eianragesl gsvtrrigei dgmnqsvata teeqtavvds lnmditeint
      121 lnqegvenlq atlracgele aqagrlrhlv dsfki
//
LOCUS       WP_235870915            2011 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF637 domain-containing protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_235870915
VERSION     WP_235870915.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04830.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..2011
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..2011
                     /product="DUF637 domain-containing protein"
     Region          11..31
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          33..50
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          64..83
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          85..103
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          109..>183
                     /region_name="PL_Passenger_AT"
                     /note="Pertactin-like passenger domains (virulence
                     factors) of autotransporter proteins of the type V
                     secretion system. Autotransporters are proteins used by
                     Gram-negative bacteria to transport proteins across their
                     outer membranes. The C-terminal (beta) domain...; cl00185"
                     /db_xref="CDD:469645"
     Region          111..131
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          133..151
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          152..169
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          171..208
                     /region_name="fil_hemag_20aa"
                     /note="adhesin HecA family 20-residue repeat (two copies);
                     TIGR01731"
                     /db_xref="CDD:273777"
     Region          171..187
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          191..209
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          211..236
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          238..256
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          285..308
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          310..328
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          948..973
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          974..991
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          993..1012
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1014..1034
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1036..1056
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1058..1077
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1079..1093
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1185..1320
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          1434..1591
                     /region_name="DUF637"
                     /note="Possible hemagglutinin (DUF637); pfam04830"
                     /db_xref="CDD:428148"
ORIGIN      
        1 lqlgslanag grilhtgngt fgldsgqvir aggelttngl ldirasewtn ssvlqagrln
       61 ldigtfrqta egkllavqsf tgrggdwsnd gllasdgsfr ldlsggyrgn gratslgdfa
      121 lnaasldlgn aaslagganv tlgagnllvn rgritaagdl vasaaslnny gtlggggnlr
      181 lnapallner gllfsgadmt lragditnly gdvyslgrld iarddaggwa nrlenisgnl
      241 estgdmrfsv ssllnrretl eiegdlqnsa igvrctgcql serwgktrss selvwireyk
      301 stlgessaaa sitagrdllv vgaslqnias nisavrdatl slsnfenkgy algeyavrgv
      361 ysppskfgee llmrilayna vndpsygegy astggrlpni hyfdknfnek vsplevihgn
      421 gknggpgwhl yfgtldveyp gtdrwnkaig ripapnyssk ktdaipdllk glapldelti
      481 nkganstvga vvqaggrvtv naaesfnnsv lqgfqavqet qlphqdiavs sttsavvtlk
      541 sqlpadlarq qitpltlpgf slpqgqnglf rlasqgaqvn qasgalksas dltqsghgvs
      601 vsaqagsdas gwstqarrvg ddrvtslags ayqgrvaeai dalrasapis gdggntgrfq
      661 agehqattgl gglvegnasg hsgngvilad lrgglpsfss lpaadriqst vpghdgngti
      721 lanwqgaqat vqaspstvrv egvvsspggn gsilaglpae qssvqalpsa vraqgslprl
      781 eersavlaep pvgqpalqtl psvarvegvp snatpsnshk ylietnpalt elkqflnsdy
      841 llgglginpd dskkrlgdgl yeqrlvreai vqrtgqrfia glnsdeamfr ylmdnaiask
      901 dvlgltpgvt lsaaqvaalt hdivwleeve vngekvlapv vylaqaegrl gpngaliqgr
      961 dvnlitggnl rnagtlraqn dlsatagnid nsglieagnr ldllasgsir ndqggiiagr
     1021 evslsaltgd vinertvtqh qssyrgtgtt eafadsaari eaaqkltvsa grdvaniggv
     1081 idskgdlalq ggrdvlvsaa vaergwtags qayqtqttqm gaevvagrdi svsagrdisv
     1141 vgsridarrd vtfeagrdvg lvaaaneeha ygktkkvtfq ddkitqqatr vdaggdlain
     1201 agqdlrlvas qasagdeayl vagdklella andssyylyd kkskgsfgsk ktrrdeitdv
     1261 tavgsqissg gdltllsggd qtyqgakles gndlaivsgg avtfdavkdl hqeshekskg
     1321 dlawqsskgk gqtdetvrqs qlvaqgnlai kaveglkidl khidqktvsq tidamvqadp
     1381 qlawlkeaeq rgdvdwrmvq evhdswkysn sglgaapsla iaivavaylg pvygamasnl
     1441 aigtinnggd lgkglqqats adslkgyaia aataylvspq ldkafgvssd ninkvtkgfk
     1501 lstvegiggf aaysiaqgfa qsvmqqaayg gsyidnlgna magqarnlgm avgfnfigds
     1561 vkypdgsppk imahalmggl laeasgsdfk tgaaaagane aminllgkmv ggdqnlelma
     1621 sqlvgvaaas avngdvslga eiaksgtayn rqlhpdeikf asdvkrvkry aqenglsedt
     1681 arkellstaa mmvdngwsqa lagtdinaar aaqylrtelg tgpdsnlfqv tqadyynerv
     1741 gltalfknke altsvlenia lanpasytrd panraevlna kgegsqagfg lalegivsap
     1801 sktalwlmga ltcsscaerd iqnawnsvas lpedirmkgy ldalhtmqgq gasvvrdnaa
     1861 sstalgvevg laidgglaga gkgvvtdgpk eipkdlgkvs fdasngvgti ysprvtlnsg
     1921 eiifdgfsvg tskgligvga dgaaelvgpl rkmlsysqsq gaqtitlkgh yaseqgsmlg
     1981 tgsvnnvnqk fsfsfpattd glkaflkelg k
//
LOCUS       WP_235870971             165 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2771 family protein [Rhodococcus spongiicola].
ACCESSION   WP_235870971
VERSION     WP_235870971.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus spongiicola
  ORGANISM  Rhodococcus spongiicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10969.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Rhodococcus spongiicola"
                     /db_xref="taxon:2487352"
     Protein         1..165
                     /product="DUF2771 family protein"
                     /calculated_mol_wt=17191
     Region          34..153
                     /region_name="DUF2771"
                     /note="Protein of unknown function (DUF2771); pfam10969"
                     /db_xref="CDD:431566"
ORIGIN      
        1 mqartkqila litavvvvsa aglagvvayl vgnaeerlpt itafakqeta tvepgfcdqm
       61 lrcaglevie lpvpegyplq lslpeeians dwrlsvqigi petrevfegy qdykpgeaya
      121 vtipgaegeq ligaiiqlpa qgglapvwai qtvplpgggv vvpas
//
LOCUS       WP_235870953             287 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2637 domain-containing protein [Rhodococcus spongiicola].
ACCESSION   WP_235870953
VERSION     WP_235870953.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus spongiicola
  ORGANISM  Rhodococcus spongiicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022388.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10935.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Rhodococcus spongiicola"
                     /db_xref="taxon:2487352"
     Protein         1..287
                     /product="DUF2637 domain-containing protein"
                     /calculated_mol_wt=30144
     Region          17..>89
                     /region_name="DUF2637"
                     /note="Protein of unknown function (DUF2637); pfam10935"
                     /db_xref="CDD:431544"
     Region          <231..>286
                     /region_name="HTH_XRE"
                     /note="Helix-turn-helix XRE-family like proteins.
                     Prokaryotic DNA binding proteins belonging to the
                     xenobiotic response element family of transcriptional
                     regulators; cl22854"
                     /db_xref="CDD:473980"
ORIGIN      
        1 mtrirwdvva ivgttyaiav lafvlsyskl tdlaeranys plmarawpli vdglavvatv
       61 gvmrmrrrgy awfllfaatt vsivaaiasa mlppgplppv aaaavsvaaa lcllaaphla
      121 vkiqrdaaqs rdtshlapaq rkqvtaqtgl aphtsqpaqa shrapakpap stehprcevs
      181 teqsssaprt eqadraaaqt tpdlhtsqfa ahataqadre vqlhlvgrdd aqprvaqpkp
      241 ravkytdaqi aetlalvasg vsqreagrri gasgntvraw vakaaal
//
LOCUS       WP_235871051             459 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rhodococcus spongiicola].
ACCESSION   WP_235871051
VERSION     WP_235871051.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus spongiicola
  ORGANISM  Rhodococcus spongiicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Rhodococcus spongiicola"
                     /db_xref="taxon:2487352"
     Protein         1..459
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=48175
     Region          24..439
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(34..35,38..39,42,75,130..131,133..135,138,157,
                     160..161,164,234,237..238,241..243,246,281,285,347..348,
                     352,356,390,393..394,397..398,401)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340899"
ORIGIN      
        1 mehwdaedvd aweaggkdia rrnlvwsvia ehvgfsvwsi wsvmvlfmpf dvygidaagk
       61 fflvavpalv gallripytv atarfggrnw tvfsallllv ptlltlwlvl npgasytmfm
      121 laaatagvgg gnfassmtni nafypqrlkg walglnaggg nigvpviqlv glmviatvgn
      181 tepylvcaiy lvliavaavg aalfmdnlgn qkadlrsmle tlrfrdswil sflyigtfgs
      241 figfsfafgq vlqinflagg dtpaqaalha aqiaflgpll gsisrpfggr ladrigggri
      301 tlytfgamvl saailvvags iddatpgaas gtamtalvvg fvalfvlsgi gngsvykmip
      361 sifearsktl dglddegrka wsrnmsgalm gfagavgglg gvginlvlra sylspaksat
      421 tafwvflgfy vlcavvtwfv fvrrtaakeg agqpiavks
//
LOCUS       WP_235871086             350 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-propeller fold lactonase family protein [Rhodococcus
            spongiicola].
ACCESSION   WP_235871086
VERSION     WP_235871086.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus spongiicola
  ORGANISM  Rhodococcus spongiicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 350)
  AUTHORS   Kajander,T., Merckel,M.C., Thompson,A., Deacon,A.M., Mazur,P.,
            Kozarich,J.W. and Goldman,A.
  TITLE     The structure of Neurospora crassa 3-carboxy-cis,cis-muconate
            lactonizing enzyme, a beta propeller cycloisomerase
  JOURNAL   Structure 10 (4), 483-492 (2002)
   PUBMED   11937053
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021778.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10282.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Rhodococcus spongiicola"
                     /db_xref="taxon:2487352"
     Protein         1..350
                     /product="beta-propeller fold lactonase family protein"
                     /calculated_mol_wt=33826
     Region          13..285
                     /region_name="PQQ_ABC_repeats"
                     /note="PQQ-dependent catabolism-associated beta-propeller
                     protein; TIGR03866"
                     /db_xref="CDD:274824"
ORIGIN      
        1 magigagaaa adtvidtipv gefpngvavs pfgfrayvan avddsvsvid tvtntvvdtv
       61 tvgdfplgva vspdgsrayv tnrdddsvsv intftntvvd tvtvgddpfg vavtpdgshv
      121 yvtnttgaps vsviqtvdnt vvttvgvgtf pigvavtpdg shvyvtntgg dtvtviqtvd
      181 ntvvttvgvg ngplgvavtr dgsrvyvgnn ddgtvsviet agntvvdtvv gvgvgaagva
      241 vtpdgsrvyv advggdavsv ietagntvie tipvggapsf vavtplgfrv yvtnsdddtv
      301 sviavercsg slcfatgslv gggsagsggt gslagggsla gagsagsvgs
//
LOCUS       WP_235871140             309 aa            linear   BCT 02-MAR-2025
DEFINITION  cutinase family protein [Rhodococcus spongiicola].
ACCESSION   WP_235871140
VERSION     WP_235871140.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus spongiicola
  ORGANISM  Rhodococcus spongiicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 309)
  AUTHORS   Longhi,S., Czjzek,M., Lamzin,V., Nicolas,A. and Cambillau,C.
  TITLE     Atomic resolution (1.0 A) crystal structure of Fusarium solani
            cutinase: stereochemical analysis
  JOURNAL   J Mol Biol 268 (4), 779-799 (1997)
   PUBMED   9175860
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013265.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01083.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Rhodococcus spongiicola"
                     /db_xref="taxon:2487352"
     Protein         1..309
                     /product="cutinase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=31712
     Region          39..211
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 mlvksmrvkr vlsgfgacvv tafgsvvavg tgtaqaapsc pdlhvvaipg twetttdpga
       61 qrgpgmlgav tdplpvsvgv dyvtyaataf pwetevygas krqavdnarg iiadiaqrcd
      121 ntnfalvgys qgadaagdla aeigtglgvv pasrmvavgl lsdprrsegd tligppvvgn
      181 gsggpriggf gmvtpqtrtf cvagdlycst pkddfvtrma gflaqnsspv apltgktmqe
      241 aiaiaedlna aggmaaldaq ssdganqdrv erlsefygsq vhqdyrryvv dsngatatsw
      301 lanwlssla
//
LOCUS       WP_235871152             273 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Rhodococcus
            spongiicola].
ACCESSION   WP_235871152
VERSION     WP_235871152.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus spongiicola
  ORGANISM  Rhodococcus spongiicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 273)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 273)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Rhodococcus spongiicola"
                     /db_xref="taxon:2487352"
     Protein         1..273
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=28904
     Region          6..>218
                     /region_name="PRK08263"
                     /note="short chain dehydrogenase; Provisional"
                     /db_xref="CDD:181334"
ORIGIN      
        1 mtspqtwmit ggnrglgral tlaalnaght vvatvrgehs lpeherltvq tldvrerqaa
       61 reavalaakh lgridvlvnn agygligave evseedarai vgtnllgpfw lsqatipimr
      121 dqggghivqi stvgavgtmp mlglynstkw glegfseama aevqqfgirv sliepgaldt
      181 dwasgsmrfs spanayadlr tklfgttevp wpqgessggt tpedaaaail arvaaksdqr
      241 lrvlvgddap aqvraaldlr hddysrdprf pva
//
LOCUS       WP_235871155             409 aa            linear   BCT 02-MAR-2025
DEFINITION  Rieske 2Fe-2S domain-containing protein [Rhodococcus spongiicola].
ACCESSION   WP_235871155
VERSION     WP_235871155.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus spongiicola
  ORGANISM  Rhodococcus spongiicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 409)
  AUTHORS   Botelho,H.M., Leal,S.S., Veith,A., Prosinecki,V., Bauer,C.,
            Frohlich,R., Kletzin,A. and Gomes,C.M.
  TITLE     Role of a novel disulfide bridge within the all-beta fold of
            soluble Rieske proteins
  JOURNAL   J Biol Inorg Chem 15 (2), 271-281 (2010)
   PUBMED   19862563
REFERENCE   2  (residues 1 to 409)
  AUTHORS   Iwata,S., Saynovits,M., Link,T.A. and Michel,H.
  TITLE     Structure of a water soluble fragment of the 'Rieske' iron-sulfur
            protein of the bovine heart mitochondrial cytochrome bc1 complex
            determined by MAD phasing at 1.5 A resolution
  JOURNAL   Structure 4 (5), 567-579 (1996)
   PUBMED   8736555
REFERENCE   3  (residues 1 to 409)
  AUTHORS   Brandt,U., Yu,L., Yu,C.A. and Trumpower,B.L.
  TITLE     The mitochondrial targeting presequence of the Rieske iron-sulfur
            protein is processed in a single step after insertion into the
            cytochrome bc1 complex in mammals and retained as a subunit in the
            complex
  JOURNAL   J Biol Chem 268 (12), 8387-8390 (1993)
   PUBMED   8386158
REFERENCE   4  (residues 1 to 409)
  AUTHORS   Huang,J.T., Struck,F., Matzinger,D.F. and Levings,C.S. 3rd.
  TITLE     Functional analysis in yeast of cDNA coding for the mitochondrial
            Rieske iron-sulfur protein of higher plants
  JOURNAL   Proc Natl Acad Sci U S A 88 (23), 10716-10720 (1991)
   PUBMED   1961737
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012575.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00355.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Rhodococcus spongiicola"
                     /db_xref="taxon:2487352"
     Protein         1..409
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /GO_function="GO:0051537 - 2 iron, 2 sulfur cluster
                     binding [Evidence IEA]"
                     /calculated_mol_wt=46237
     Region          1..355
                     /region_name="PobA"
                     /note="Chlorophyllide a oxygenase/letal leaf spot protein
                     [Coenzyme transport and metabolism]; COG5749"
                     /db_xref="CDD:444459"
     Region          1..132
                     /region_name="Rieske_RO_Alpha_PhDO_like"
                     /note="Rieske non-heme iron oxygenase (RO) family,
                     Phthalate 4,5-dioxygenase (PhDO)-like subfamily,
                     N-terminal Rieske domain of the oxygenase alpha subunit;
                     composed of the oxygenase alpha subunits of PhDO and
                     similar proteins including 3-chlorobenzoate 3; cd03479"
                     /db_xref="CDD:239561"
ORIGIN      
        1 mgrlfrrywi pallaeelpg pdcdpvrvkl lgeqliafrd segrigllde fcshrtasly
       61 fgrneecglr cayhgwkydv egncvdmpse panskfksri kqkaypcver ggviwtymgp
      121 pelkpevpel ewamlgdgqr fvskrlqesn ylqameggid sshvsfahrf nldddpmhsg
      181 tegnkylkad trpkfevaes dgglvigarr nandeeyywr itqwimpwyt iippfgthnp
      241 lgghawvpid dttcwawsin yhptrelred elaamqngdg ihskyvpgty rplankdndy
      301 lmdreaqrqk ktfsgiegis aqdfslqesm gaicdrtker lgtsdagiil arrrllavld
      361 dledeslpgl etehqrvrst sillpkatpf kegagealhm vegedfvsi
//
LOCUS       WP_235871179              48 aa            linear   BCT 02-MAR-2025
DEFINITION  type I restriction enzyme endonuclease domain-containing protein
            [Pseudomonas aeruginosa].
ACCESSION   WP_235871179
VERSION     WP_235871179.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 48)
  AUTHORS   Roberts,R.J., Belfort,M., Bestor,T., Bhagwat,A.S., Bickle,T.A.,
            Bitinaite,J., Blumenthal,R.M., Degtyarev,S.Kh., Dryden,D.T.,
            Dybvig,K., Firman,K., Gromova,E.S., Gumport,R.I., Halford,S.E.,
            Hattman,S., Heitman,J., Hornby,D.P., Janulaitis,A., Jeltsch,A.,
            Josephsen,J., Kiss,A., Klaenhammer,T.R., Kobayashi,I., Kong,H.,
            Kruger,D.H., Lacks,S., Marinus,M.G., Miyahara,M., Morgan,R.D.,
            Murray,N.E., Nagaraja,V., Piekarowicz,A., Pingoud,A., Raleigh,E.,
            Rao,D.N., Reich,N., Repin,V.E., Selker,E.U., Shaw,P.C., Stein,D.C.,
            Stoddard,B.L., Szybalski,W., Trautner,T.A., Van Etten,J.L.,
            Vitor,J.M., Wilson,G.G. and Xu,S.Y.
  TITLE     A nomenclature for restriction enzymes, DNA methyltransferases,
            homing endonucleases and their genes
  JOURNAL   Nucleic Acids Res 31 (7), 1805-1812 (2003)
   PUBMED   12654995
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023295.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11867.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..48
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..48
                     /product="type I restriction enzyme endonuclease
                     domain-containing protein"
                     /calculated_mol_wt=5416
     Region          <3..31
                     /region_name="DUF3387"
                     /note="Domain of unknown function (DUF3387); pfam11867"
                     /db_xref="CDD:432144"
ORIGIN      
        1 mdklrllvkl ilhtykyppd rqeavvrlvl ertrqcvgla fstglacm
//
LOCUS       WP_235871273             159 aa            linear   BCT 02-MAR-2025
DEFINITION  SAV_6107 family HEPN domain-containing protein [Rhodococcus
            spongiicola].
ACCESSION   WP_235871273
VERSION     WP_235871273.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus spongiicola
  ORGANISM  Rhodococcus spongiicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 159)
  AUTHORS   Anantharaman,V., Makarova,K.S., Burroughs,A.M., Koonin,E.V. and
            Aravind,L.
  TITLE     Comprehensive analysis of the HEPN superfamily: identification of
            novel roles in intra-genomic conflicts, defense, pathogenesis and
            RNA processing
  JOURNAL   Biol Direct 8, 15 (2013)
   PUBMED   23768067
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037499.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18726.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Rhodococcus spongiicola"
                     /db_xref="taxon:2487352"
     Protein         1..159
                     /product="SAV_6107 family HEPN domain-containing protein"
                     /calculated_mol_wt=16616
     Region          19..120
                     /region_name="HEPN_SAV_6107"
                     /note="SAV_6107-like HEPN; pfam18726"
                     /db_xref="CDD:436694"
ORIGIN      
        1 msvrattllr radgllseav aageagerfr csylgalkga aavlagvdrn vgsagsrrpr
       61 srsawvlmar avpeladwag yfadhstlra sieagvaqtv sdadadhfyl evgrfltave
      121 dflaepgrkg dlpgfavrhp rgdsghagaa vngdirdnh
//
LOCUS       WP_235871412             559 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase [Shimia sediminis].
ACCESSION   WP_235871412
VERSION     WP_235871412.1
KEYWORDS    RefSeq.
SOURCE      Shimia sediminis
  ORGANISM  Shimia sediminis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae.
REFERENCE   1  (residues 1 to 559)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Shimia sediminis"
                     /db_xref="taxon:2497945"
     Protein         1..559
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=63001
     Region          14..510
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
     Site            order(21,61,243,337..338)
                     /site_type="active"
                     /db_xref="CDD:293732"
     Site            order(21,61,243,338)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293732"
ORIGIN      
        1 msdktagsgd aplnilfimy dqlrfdylsc aghphlhtph fdrvaemgvr ftnayvqspi
       61 cgasrmsfyt gryvsshgaq wngfplrvge mtlgdhlrkv gmdcwllgkt hmkadkegme
      121 rlglspdsvi garqaecgfd awirddglwg egpdgfydek rspyneylks kgyesenpwa
      181 dfanagided gnlasgwmfa nadkpanire edsetpwlts rtmefidqak gpwcahvsyi
      241 kphwpyivpa pyhnmyganh vpapnrsdve rqdphpvyga ymenpicsaf qreevrqkvi
      301 paymglikqc ddqlgrileh ldqsgrtqnt mivltsdhgd ylgdhwmgek dlfhdpsvki
      361 pmiiydprkt adgtrgstcd alvesidiaa tfvdaaggqv pdhiiegrsl mpwingeepe
      421 wrefvisefd ysatgqgakl gleprdarlf mvfdgrfkmm haeggfrpml fdletdpeef
      481 hdlakgdahq evldrlygyl gqwgrrmsqr vtvseddira krgksgrkgi lpflfdgsev
      541 deeltakyrg raaqnhlet
//
LOCUS       WP_235871441              94 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin-binding protein [Shimia sediminis].
ACCESSION   WP_235871441
VERSION     WP_235871441.1
KEYWORDS    RefSeq.
SOURCE      Shimia sediminis
  ORGANISM  Shimia sediminis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae.
REFERENCE   1  (residues 1 to 94)
  AUTHORS   Sola,M., Kneussel,M., Heck,I.S., Betz,H. and Weissenhorn,W.
  TITLE     X-ray crystal structure of the trimeric N-terminal domain of
            gephyrin
  JOURNAL   J Biol Chem 276 (27), 25294-25301 (2001)
   PUBMED   11325967
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013183.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00994.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Shimia sediminis"
                     /db_xref="taxon:2497945"
     Protein         1..94
                     /product="molybdopterin-binding protein"
                     /calculated_mol_wt=9979
     Region          8..>82
                     /region_name="MoCF_BD"
                     /note="molybdenum cofactor (MoCF) binding domain (BD).
                     This domain is found a variety of proteins involved in
                     biosynthesis of molybdopterin cofactor, like MoaB, MogA,
                     and MoeA. The domain is presumed to bind molybdopterin;
                     cl00451"
                     /db_xref="CDD:444911"
ORIGIN      
        1 msienpligi lvvsdrasrg eyedmggpaa edwlrnvvts ataymrkivs dgrdtvaaal
       61 refagaenan lilvcggtgl apqrrnargp rrcy
//
LOCUS       WP_235871528            1466 aa            linear   BCT 02-MAR-2025
DEFINITION  Eco57I restriction-modification methylase domain-containing protein
            [Pseudoxanthomonas winnipegensis].
ACCESSION   WP_235871528
VERSION     WP_235871528.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
REFERENCE   1  (residues 1 to 1466)
  AUTHORS   Schluckebier,G., Kozak,M., Bleimling,N., Weinhold,E. and Saenger,W.
  TITLE     Differential binding of S-adenosylmethionine S-adenosylhomocysteine
            and Sinefungin to the adenine-specific DNA methyltransferase M.TaqI
  JOURNAL   J Mol Biol 265 (1), 56-67 (1997)
   PUBMED   8995524
REFERENCE   2  (residues 1 to 1466)
  AUTHORS   Janulaitis,A., Vaisvila,R., Timinskas,A., Klimasauskas,S. and
            Butkus,V.
  TITLE     Cloning and sequence analysis of the genes coding for Eco57I type
            IV restriction-modification enzymes
  JOURNAL   Nucleic Acids Res 20 (22), 6051-6056 (1992)
   PUBMED   1334261
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019291.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07669.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1466
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..1466
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=164010
     Region          <543..1291
                     /region_name="YeeA"
                     /note="Type II restriction/modification system,
                     endonuclease and methylase domains [Defense mechanisms];
                     COG1002"
                     /db_xref="CDD:440626"
ORIGIN      
        1 mtqtqhhdwl slveisgpfl avpvlkeafp qgleeldaak rkrlrqayde wrealetddl
       61 hfadlhaawi devlsrglel dedgrgdvlk rkdwcvahlt adlpehgvtl lpdfavvgng
      121 dqplmlvhay gqdvdldatq kldgwastpa ermvrlcrat gcrlglvtng erwmmvdapv
      181 gavttfaswy ariwgqesit lqafvhllgi rrffvdeser lpalfdrslk fqddvtdalg
      241 eqvrravevl iqsldkadqd rdrellrgvk eaelyeaalt vmmrlvflls aeergllllg
      301 deryeanyal stlrmqlrae sdeilerrwd awsrllavfr avyggikhen lrlpalggsl
      361 fdpdrfpfle grargsdwrt dpakplpidn rtvlllleai qqfqgrtlsy raldveqigy
      421 vyegllertv krtaevtlel datksaqspw itlaelesar ldgadrltel lqqrsgssas
      481 rvrndlarpv ddsladrvlt achgdtalrd rikpfghmvr tdpwgyplvy pagafivttg
      541 sdrretgthy tpkslteaiv aetltpiayv gptqgtprad walrspadll dlkicdpamg
      601 sgaflvqacr wladrlveaw aqaeaqghti gvdgqvadas asvealprdt etrtiaarrl
      661 iaerglygvd lnplavelak lsiwlvtlak grpfgfldhn lhcgdsllgi hrldqltqls
      721 mnptgqgqlr lfgqnveqav reaielrsrl rempirdird veamahldad arrrlevpec
      781 iadafigevf asvggtalen alasltiqag qaidgdrevl asmrrrsvaa lstdlagdkp
      841 arrpfhwple fpevfarerg gfdgivgnpp flggqritgv agtafrdwlv ayiaegrrgs
      901 adlvayfflr awsllreggg fgllavntia egdtrqvgle amvgagavih aaypnepwpg
      961 kaavvtsrvh vhkgewqger sllgrsapfi saflsdreew spkrlkaneg kafigsyvlg
     1021 mgfvltsdea qrmldadpkn aevilpying ddlnsdpeqr psrwvinfwd wpevraqtys
     1081 kpwswiedev kperqrrdkn gkfmlrkplp erwwqfgekr palyhsigrg qhfeqhpdgw
     1141 nskakpmkei lvsarvgkyf gpsvvpnnvv cseqcvvfaa asphafavll nssigqawvw
     1201 qqssrhetrl rfspsdafet lpfpndletl eplgeaylra rrevmrtdhi gltklynrfh
     1261 tdterdprie glralqremd asvaraygwh dldlghgfhe vpylpendrv rftiseaari
     1321 evlrrlseln rqhyeeevaq glhgrkangt atrkprtqrt entlaqqssf gfdanpaneg
     1381 hyfkaaepra dyragpahai veylkthagw haksdilaat glvesqwnst italisggsv
     1441 erqgerrgar yriqpgneen yhegts
//
LOCUS       WP_235871550             894 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase 2 galactose-binding domain-containing protein
            [Pseudoxanthomonas winnipegensis].
ACCESSION   WP_235871550
VERSION     WP_235871550.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
REFERENCE   1  (residues 1 to 894)
  AUTHORS   Skalova,T., Dohnalek,J., Spiwok,V., Lipovova,P., Vondrackova,E.,
            Petrokova,H., Duskova,J., Strnad,H., Kralova,B. and Hasek,J.
  TITLE     Cold-active beta-galactosidase from Arthrobacter sp. C2-2 forms
            compact 660 kDa hexamers: crystal structure at 1.9A resolution
  JOURNAL   J Mol Biol 353 (2), 282-294 (2005)
   PUBMED   16171818
REFERENCE   2  (residues 1 to 894)
  AUTHORS   Juers,D.H., Hakda,S., Matthews,B.W. and Huber,R.E.
  TITLE     Structural basis for the altered activity of Gly794 variants of
            Escherichia coli beta-galactosidase
  JOURNAL   Biochemistry 42 (46), 13505-13511 (2003)
   PUBMED   14621996
REFERENCE   3  (residues 1 to 894)
  AUTHORS   Juers,D.H., Heightman,T.D., Vasella,A., McCarter,J.D.,
            Mackenzie,L., Withers,S.G. and Matthews,B.W.
  TITLE     A structural view of the action of Escherichia coli (lacZ)
            beta-galactosidase
  JOURNAL   Biochemistry 40 (49), 14781-14794 (2001)
   PUBMED   11732897
REFERENCE   4  (residues 1 to 894)
  AUTHORS   Juers,D.H., Jacobson,R.H., Wigley,D., Zhang,X.J., Huber,R.E.,
            Tronrud,D.E. and Matthews,B.W.
  TITLE     High resolution refinement of beta-galactosidase in a new crystal
            form reveals multiple metal-binding sites and provides a structural
            basis for alpha-complementation
  JOURNAL   Protein Sci 9 (9), 1685-1699 (2000)
   PUBMED   11045615
REFERENCE   5  (residues 1 to 894)
  AUTHORS   Jain,S., Drendel,W.B., Chen,Z.W., Mathews,F.S., Sly,W.S. and
            Grubb,J.H.
  TITLE     Structure of human beta-glucuronidase reveals candidate lysosomal
            targeting and active-site motifs
  JOURNAL   Nat Struct Biol 3 (4), 375-381 (1996)
   PUBMED   8599764
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046887.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22666.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..894
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..894
                     /product="glycosyl hydrolase 2 galactose-binding
                     domain-containing protein"
                     /calculated_mol_wt=97419
     Region          113..>491
                     /region_name="LacZ"
                     /note="Beta-galactosidase/beta-glucuronidase [Carbohydrate
                     transport and metabolism]; COG3250"
                     /db_xref="CDD:442481"
     Region          680..761
                     /region_name="Mannosidase_ig"
                     /note="Mannosidase Ig/CBM-like domain; pfam17786"
                     /db_xref="CDD:465505"
     Region          774..879
                     /region_name="Ig_GlcNase"
                     /note="Exo-beta-D-glucosaminidase Ig-fold domain;
                     pfam18368"
                     /db_xref="CDD:465727"
ORIGIN      
        1 mrqtcrhllw wmlaaastag aitpyapttv aadagtvtri ahwqiqdstk aqqrgaeisa
       61 adfstqgwya asaratvmaa llenglypdv fhsdnltavq vpdgsgnlvv tpwwyrsefv
      121 lgarvpgqrt rvrtngviaa adlwvnghlv adrsaiagay pvnefdvtpw vhagrnvial
      181 rvhpadprqs lsigwvdwnp tppdnnmgpw rgvdivqsgp valgdpqvet alsddharaa
      241 ltvrvearnl dtvahevtvs grvadvplar tvtlapgqmq eltfapedtp glvlahprlw
      301 wpagmgeqpl yalalraavg gadsdraata fgirsvvsdl taegyrrfsi ngqpllirga
      361 gwapdmflrd dparletefa yvrnlglntl rtegkledqr fyeladrdgl lilagweccd
      421 mwesaaqtgg vpweahdfdv aqasmatear llrnhpsvig fligsdnapp palarlylda
      481 lhaahwslpv isaaadkpae glgpsgmkma gpydwvppay wyadklggaf gfdsevsaga
      541 diprmedlqr mlseqeqeal wklplqrqyh asaawspfav ltlfdqalar rygapsglad
      601 yvakaqldny dntraqfeaf narmdadqpa tgviywmlnn awpslhwhly dydlhpagay
      661 fgakkanepl hiqyaydsre vvlvnhtlrq veglratlrv rdlsgavryq rqvndialag
      721 nhtrriatlp pptdlsttyf veldlasadg aalgrnvywl stradvldwe hsnwyatpss
      781 qdadlrglst lpqvscqvea asrregdqel ttvtlslpag aagpavfqhl tlrdaagqpl
      841 vpvlwddndv tlwpgeslvl harhpraaaa avveiegwns plvrlpqaap atth
//
LOCUS       WP_235871555             301 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Pseudoxanthomonas
            winnipegensis].
ACCESSION   WP_235871555
VERSION     WP_235871555.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..301
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=33369
     Region          11..108
                     /region_name="cupin_HpaA-like_N"
                     /note="AraC/XylS family transcriptional regulators similar
                     to HpaA, N-terminal cupin domain; cd06999"
                     /db_xref="CDD:380403"
     Region          209..291
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
ORIGIN      
        1 maektarpav vpafglyger ggsaptdalh wesiparsrl hdwhirphrh hdlsqllyvq
       61 rgpagvqidg evrriaratv vwmpplhvhg fefharirgh ivtlspalla hwtaqwpela
      121 talarpacle vghdrpqlda cfaaiageha hgregrgaml halagqllvw aarrclhqrq
      181 alpdaeqarg aahvraflsl ldqhyrehwp lqryaeqlgv saghlgllcr qfadatplel
      241 vqrrvmlear rslvytamsv qqiaawlgfa daayfsryfs rnagcspnaf rrarqgtsaa
      301 s
//
LOCUS       WP_235871574             155 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: Mov34/MPN/PAD-1 family protein [Gammaproteobacteria].
ACCESSION   WP_235871574
VERSION     WP_235871574.1
KEYWORDS    RefSeq.
SOURCE      Gammaproteobacteria (g-proteobacteria)
  ORGANISM  Gammaproteobacteria
            Bacteria; Pseudomonadati; Pseudomonadota.
REFERENCE   1  (residues 1 to 155)
  AUTHORS   Iyer,L.M., Zhang,D., Rogozin,I.B. and Aravind,L.
  TITLE     Evolution of the deaminase fold and multiple origins of eukaryotic
            editing and mutagenic nucleic acid deaminases from bacterial toxin
            systems
  JOURNAL   Nucleic Acids Res 39 (22), 9473-9497 (2011)
   PUBMED   21890906
REFERENCE   2  (residues 1 to 155)
  AUTHORS   Iyer,L.M., Burroughs,A.M. and Aravind,L.
  TITLE     The prokaryotic antecedents of the ubiquitin-signaling system and
            the early evolution of ubiquitin-like beta-grasp domains
  JOURNAL   Genome Biol 7 (7), R60 (2006)
   PUBMED   16859499
REFERENCE   3  (residues 1 to 155)
  AUTHORS   Burns,K.E., Baumgart,S., Dorrestein,P.C., Zhai,H., McLafferty,F.W.
            and Begley,T.P.
  TITLE     Reconstitution of a new cysteine biosynthetic pathway in
            Mycobacterium tuberculosis
  JOURNAL   J Am Chem Soc 127 (33), 11602-11603 (2005)
   PUBMED   16104727
REFERENCE   4  (residues 1 to 155)
  AUTHORS   Verma,R., Aravind,L., Oania,R., McDonald,W.H., Yates,J.R. 3rd,
            Koonin,E.V. and Deshaies,R.J.
  TITLE     Role of Rpn11 metalloprotease in deubiquitination and degradation
            by the 26S proteasome
  JOURNAL   Science 298 (5593), 611-615 (2002)
   PUBMED   12183636
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025819.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14464.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Gammaproteobacteria"
                     /db_xref="taxon:1236"
     Protein         1..155
                     /product="Mov34/MPN/PAD-1 family protein"
                     /calculated_mol_wt=17319
     Region          28..139
                     /region_name="MPN"
                     /note="Mpr1p, Pad1p N-terminal (MPN) domains; cl13996"
                     /db_xref="CDD:472685"
ORIGIN      
        1 msswaaddnr tllhfskstl etfrqhvqas dsdceaggll lgsvhgthml ieqatvptaw
       61 dkrfrylfer mpfgheaial aqwtashgti rylgewhthp ednpnpsgld rsewnrlsak
      121 rrdkrptlav ivgrhalyie lvpssgqgsv fspve
//
LOCUS       WP_235871603             157 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3060 domain-containing protein [Pseudoxanthomonas
            winnipegensis].
ACCESSION   WP_235871603
VERSION     WP_235871603.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11259.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..157
                     /product="DUF3060 domain-containing protein"
                     /calculated_mol_wt=15927
     Region          98..153
                     /region_name="DUF3060"
                     /note="Protein of unknown function (DUF3060); pfam11259"
                     /db_xref="CDD:431765"
ORIGIN      
        1 mpgilaltac ggaspsaspp aspaaaaqtl vdpasgaqcg gkdlrltrdr asvvidgacg
       61 avvitgshve lnlsqaqslr veghdisvln eklgqatvtg qrntlnltqv dlvqlegddn
      121 vvlatrigri rflgngntln psgkpavedr grdnkvl
//
LOCUS       WP_235871647             235 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF2968 domain-containing protein
            [Pseudoxanthomonas].
ACCESSION   WP_235871647
VERSION     WP_235871647.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas
  ORGANISM  Pseudoxanthomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022628.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11180.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Pseudoxanthomonas"
                     /db_xref="taxon:83618"
     Protein         1..235
                     /product="DUF2968 domain-containing protein"
                     /calculated_mol_wt=25846
     Region          26..203
                     /region_name="DUF2968"
                     /note="Protein of unknown function (DUF2968); pfam11180"
                     /db_xref="CDD:431707"
ORIGIN      
        1 msriwfgaai vlistacapl paatrtkqap ppeqtaevae psigntaeel rhlmdagslt
       61 elrttyngny gasllfhads lnyyvtlfrd kqfwrvirts sveqaeqvyk tfvdqtnqls
      121 qvyidtvrle agkrytermv elnqkrlqgl qaeveqqrqq alqvsnalqq nkqqavslss
      181 dlratntele altrrieqlq qqqgnpalel pptpatapaa qpaapspsvp apgtd
//
LOCUS       WP_235871606             285 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Pseudoxanthomonas winnipegensis].
ACCESSION   WP_235871606
VERSION     WP_235871606.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00528.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..285
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=31026
     Region          1..279
                     /region_name="TM_PBP2"
                     /note="Transmembrane subunit (TM) found in Periplasmic
                     Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
                     transporters which generally bind type 2 PBPs. These types
                     of transporters consist of a PBP, two TMs, and two
                     cytoplasmic ABC ATPase subunits, and...; cl00427"
                     /db_xref="CDD:444901"
     Site            order(80..81,84..85,90,101..104,106..115,118..119,121,146,
                     148,150,152,155..156,158,162..163,166,183,197..198,201,
                     208..211,214..215,228..229,239..240,243..244,246..247,
                     250..251,254)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:119394"
     Site            order(107..121,208..213)
                     /site_type="active"
                     /note="conserved gate region [active]"
                     /db_xref="CDD:119394"
     Site            order(121,141,214,226,229,239)
                     /site_type="active"
                     /note="putative PBP binding loops [active]"
                     /db_xref="CDD:119394"
     Site            order(167..179,185..186,190)
                     /site_type="active"
                     /note="ABC-ATPase subunit interface [active]"
                     /db_xref="CDD:119394"
ORIGIN      
        1 msavgrarwp arivlglgfa flylpvlllm lwsfnrsrla tvwagfsfkw ygellgdasi
       61 leaawvslri afwtatasvv lgtlaalamt rlrrfpgrtl fggliaaplv mpdviiglsm
      121 llmfvslgea fhfqpkgmvs iwiahttfsl afvavvvssr maeldrslee aamdlganrv
      181 kvfflitlpi iapalvsgwl laftlslddv viasfvsgpd sttlpmkvfs svrlglspki
      241 nalatlmiva vslcaclgww lmsrseqrrk rdrqlalrgg ddgrs
//
LOCUS       WP_235871702             513 aa            linear   BCT 02-MAR-2025
DEFINITION  chemotaxis protein CheB [Pseudoxanthomonas winnipegensis].
ACCESSION   WP_235871702
VERSION     WP_235871702.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
REFERENCE   1  (residues 1 to 513)
  AUTHORS   West,A.H., Martinez-Hackert,E. and Stock,A.M.
  TITLE     Crystal structure of the catalytic domain of the chemotaxis
            receptor methylesterase, CheB
  JOURNAL   J Mol Biol 250 (2), 276-290 (1995)
   PUBMED   7608974
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013502.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01339.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..513
                     /product="chemotaxis protein CheB"
                     /GO_component="GO:0005737 - cytoplasm [Evidence IEA]"
                     /GO_function="GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA]"
                     /GO_function="GO:0008984 - protein-glutamate
                     methylesterase activity [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /GO_process="GO:0006935 - chemotaxis [Evidence IEA]"
                     /calculated_mol_wt=53075
     Region          <29..512
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          <69..104
                     /region_name="Bcr-Abl_Oligo"
                     /note="Bcr-Abl oncoprotein oligomerization domain;
                     pfam09036"
                     /db_xref="CDD:430380"
     Region          350..507
                     /region_name="CheB_methylest"
                     /note="CheB methylesterase; pfam01339"
                     /db_xref="CDD:460166"
ORIGIN      
        1 msateaalsa prvvllarpg aareqlrgal lgagariale ddpnsldadt laasgpqvvl
       61 valepaieda larleavlad paltviydea alasaregwd aqrwarhlra klhghrdvlp
      121 pgaeieppqa pepgrppape qlhegarlel hldeaagqsa alpvdpglnv ptdaleasvd
      181 qiegvdttsp spvswsladl pdpqpgdrdp atlppleled eaagaqpada fvidldnwtp
      241 petptrqalv dtpvlaplep tepaveglpv aaeapppppr psfgtlslve dfqvtvpekr
      301 apaeppplpp gfgelnlele aldpahgvaa dpqpkgeivp gavllfagig gpdavrrvla
      361 elpdtleqpv lvhlrldggr ydnlvrqier vsplpvsipv agmvaragvv yvvpddlsar
      421 atagkvefva eavdvtallg glppyrtavl llsgadpaha epalmlaarg gliggqslqg
      481 cydwaasral eagggdiaap eelarrvaqh lgi
//
LOCUS       WP_235871739             161 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Pseudoxanthomonas winnipegensis].
ACCESSION   WP_235871739
VERSION     WP_235871739.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
REFERENCE   1  (residues 1 to 161)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 161)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..161
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=17220
     Region          1..161
                     /region_name="COG3818"
                     /note="Predicted N-acetyltransferase, GNAT superfamily
                     [General function prediction only]"
                     /db_xref="CDD:443030"
ORIGIN      
        1 msgatplrdv aptdlpalla lnnahaaals wqtpgqfaql igmacfartc gqadallial
       61 dqnaaydnpn fawlsarfer fvyidrvvva ehaqgrglag alyealkqqa rlqgqtrlvc
      121 einldppnpa svafhqrlgf eqvgqadlps gkrvgyfacp l
//
LOCUS       WP_235871566             145 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6393 family protein [Pseudomonadota].
ACCESSION   WP_235871566
VERSION     WP_235871566.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonadota (proteobacteria)
  ORGANISM  Pseudomonadota
            Bacteria; Pseudomonadati.
REFERENCE   1  (residues 1 to 145)
  AUTHORS   Hou,J., Robbel,L. and Marahiel,M.A.
  TITLE     Identification and characterization of the lysobactin biosynthetic
            gene cluster reveals mechanistic insights into an unusual
            termination module architecture
  JOURNAL   Chem Biol 18 (5), 655-664 (2011)
   PUBMED   21609846
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039755.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19930.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Pseudomonadota"
                     /db_xref="taxon:1224"
     Protein         1..145
                     /product="DUF6393 family protein"
                     /calculated_mol_wt=15389
     Region          50..145
                     /region_name="DUF6393"
                     /note="Family of unknown function (DUF6393); pfam19930"
                     /db_xref="CDD:437762"
ORIGIN      
        1 mprftpcgwt asmaliaaaa lplasctntg tahraptqea smksgvgpml eeiyasrkpv
       61 rfeqldvsdi vrrhfpvgtd katvvdafas sstskvvedt adklvvrdnh gqamldpdar
      121 svvitfhlda dgkvsgieal hlknq
//
LOCUS       WP_235871815             262 aa            linear   BCT 02-MAR-2025
DEFINITION  urease accessory protein UreD [Pelagimonas phthalicica].
ACCESSION   WP_235871815
VERSION     WP_235871815.1
KEYWORDS    RefSeq.
SOURCE      Pelagimonas phthalicica
  ORGANISM  Pelagimonas phthalicica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Pelagimonas.
REFERENCE   1  (residues 1 to 262)
  AUTHORS   Farrugia,M.A., Wang,B., Feig,M. and Hausinger,R.P.
  TITLE     Mutational and Computational Evidence That a Nickel-Transfer Tunnel
            in UreD Is Used for Activation of Klebsiella aerogenes Urease
  JOURNAL   Biochemistry 54 (41), 6392-6401 (2015)
   PUBMED   26401965
REFERENCE   2  (residues 1 to 262)
  AUTHORS   Farrugia,M.A., Macomber,L. and Hausinger,R.P.
  TITLE     Biosynthesis of the urease metallocenter
  JOURNAL   J Biol Chem 288 (19), 13178-13185 (2013)
   PUBMED   23539618
REFERENCE   3  (residues 1 to 262)
  AUTHORS   Moncrief,M.B. and Hausinger,R.P.
  TITLE     Characterization of UreG, identification of a UreD-UreF-UreG
            complex, and evidence suggesting that a nucleotide-binding site in
            UreG is required for in vivo metallocenter assembly of Klebsiella
            aerogenes urease
  JOURNAL   J Bacteriol 179 (13), 4081-4086 (1997)
   PUBMED   9209019
REFERENCE   4  (residues 1 to 262)
  AUTHORS   Neyrolles,O., Ferris,S., Behbahani,N., Montagnier,L. and
            Blanchard,A.
  TITLE     Organization of Ureaplasma urealyticum urease gene cluster and
            expression in a suppressor strain of Escherichia coli
  JOURNAL   J Bacteriol 178 (3), 647-655 (1996)
   PUBMED   8550495
  REMARK    Erratum:[J Bacteriol. 1996 May;178(9):2725. doi:
            10.1128/jb.178.9.2725-2725.1996.. PMID: 8626347]
REFERENCE   5  (residues 1 to 262)
  AUTHORS   Park,I.S., Carr,M.B. and Hausinger,R.P.
  TITLE     In vitro activation of urease apoprotein and role of UreD as a
            chaperone required for nickel metallocenter assembly
  JOURNAL   Proc Natl Acad Sci U S A 91 (8), 3233-3237 (1994)
   PUBMED   7909161
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10002853
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Pelagimonas phthalicica"
                     /db_xref="taxon:1037362"
     Protein         1..262
                     /product="urease accessory protein UreD"
                     /GO_function="GO:0016151 - nickel cation binding [Evidence
                     IEA]"
                     /GO_process="GO:0008152 - metabolic process [Evidence
                     IEA]"
                     /calculated_mol_wt=28209
     Region          2..262
                     /region_name="UreH"
                     /note="Urease accessory protein UreH [Posttranslational
                     modification, protein turnover, chaperones]; COG0829"
                     /db_xref="CDD:440591"
ORIGIN      
        1 maqpraigrl dvhskareng saiahlrsqg cmkalfprrs dwvdaivint aggltggdkl
       61 didacvgags rmslttqaae raykasadva rvstklcved sarmhwlpqe lilfegaalk
      121 rrlqialqgk aellmvepvv fgrvamgeel tnvqfqdrie irrdgvplym dalnltgdlr
      181 aqmarvagga gamasvvlva pnaeahlkpl rkllpesgga sllaedllal rllasdsfel
      241 rrallpildr lsgdrlptsw rl
//
LOCUS       WP_235871868             296 aa            linear   BCT 02-MAR-2025
DEFINITION  endonuclease/exonuclease/phosphatase family protein [Pelagimonas
            phthalicica].
ACCESSION   WP_235871868
VERSION     WP_235871868.1
KEYWORDS    RefSeq.
SOURCE      Pelagimonas phthalicica
  ORGANISM  Pelagimonas phthalicica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Pelagimonas.
REFERENCE   1  (residues 1 to 296)
  AUTHORS   Dlakic,M.
  TITLE     Functionally unrelated signalling proteins contain a fold similar
            to Mg2+-dependent endonucleases
  JOURNAL   Trends Biochem Sci 25 (6), 272-273 (2000)
   PUBMED   10838565
REFERENCE   2  (residues 1 to 296)
  AUTHORS   Mol,C.D., Kuo,C.F., Thayer,M.M., Cunningham,R.P. and Tainer,J.A.
  TITLE     Structure and function of the multifunctional DNA-repair enzyme
            exonuclease III
  JOURNAL   Nature 374 (6520), 381-386 (1995)
   PUBMED   7885481
REFERENCE   3  (residues 1 to 296)
  AUTHORS   Lahm,A. and Suck,D.
  TITLE     DNase I-induced DNA conformation. 2 A structure of a DNase
            I-octamer complex
  JOURNAL   J Mol Biol 222 (3), 645-667 (1991)
   PUBMED   1748997
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015338.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03372.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Pelagimonas phthalicica"
                     /db_xref="taxon:1037362"
     Protein         1..296
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=31871
ORIGIN      
        1 matwhgdfsr kgpgllvrel agdkpvpgva siaqarpdil lltnfdfdag hvalgalqsr
       61 lrdqswpmph lfalrpntgl ptgvdvdgdg klggprdaqg fgyfsgqggq ailsrypvrl
      121 vadhsgafwa dapgsliakd dpvgaaqrls ssahwaveve vdgakvtllt laatppvfdg
      181 pedrngrrnr devlywshvl hdkaafadap vvvlgnfnld pdrgqglhea vaqvlahdrl
      241 qdplpkvptv kweragemri syilpdqslr igkaevmppe pkagphrlvw mdllld
//
LOCUS       WP_235871871             271 aa            linear   BCT 02-MAR-2025
DEFINITION  protein-disulfide reductase DsbD domain-containing protein
            [Pelagimonas phthalicica].
ACCESSION   WP_235871871
VERSION     WP_235871871.1
KEYWORDS    RefSeq.
SOURCE      Pelagimonas phthalicica
  ORGANISM  Pelagimonas phthalicica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Pelagimonas.
REFERENCE   1  (residues 1 to 271)
  AUTHORS   Bushweller,J.H.
  TITLE     Protein Disulfide Exchange by the Intramembrane Enzymes DsbB, DsbD,
            and CcdA
  JOURNAL   J Mol Biol 432 (18), 5091-5103 (2020)
   PUBMED   32305461
REFERENCE   2  (residues 1 to 271)
  AUTHORS   Smith,R.P., Whitten,A.E., Paxman,J.J., Kahler,C.M., Scanlon,M.J.
            and Heras,B.
  TITLE     Production, biophysical characterization and initial
            crystallization studies of the N- and C-terminal domains of DsbD,
            an essential enzyme in Neisseria meningitidis
  JOURNAL   Acta Crystallogr F Struct Biol Commun 74 (Pt 1), 31-38 (2018)
   PUBMED   29372905
REFERENCE   3  (residues 1 to 271)
  AUTHORS   Goulding,C.W., Sawaya,M.R., Parseghian,A., Lim,V., Eisenberg,D. and
            Missiakas,D.
  TITLE     Thiol-disulfide exchange in an immunoglobulin-like fold: structure
            of the N-terminal domain of DsbD
  JOURNAL   Biochemistry 41 (22), 6920-6927 (2002)
   PUBMED   12033924
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022853.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11412.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Pelagimonas phthalicica"
                     /db_xref="taxon:1037362"
     Protein         1..271
                     /product="protein-disulfide reductase DsbD
                     domain-containing protein"
                     /calculated_mol_wt=29083
     Region          5..>271
                     /region_name="COG4233"
                     /note="Thiol-disulfide interchange protein, contains DsbC
                     and DsbD domains [Posttranslational modification, protein
                     turnover, chaperones, Energy production and conversion]"
                     /db_xref="CDD:443377"
ORIGIN      
        1 msedmknfvl aiaclflpli ssgaaqaesy enviraelrp gwrlpdgshm aalhlelapg
       61 wktywrapgd agippqfrwk gsgsavqvhw papqvfhqsg mrsvgysgsv tlplrvslrn
      121 stkdarlkgv idigickdvc lphrvrveav lpatktkpdp siaaaladep ysaedagvss
      181 vscrvapapn gmmlraqidm pkgtgrehtv ieaanpeiwv geprtwwegg hlmaeaqmah
      241 magsafavdr srlritvlgg hmpvdihgcs g
//
LOCUS       WP_235871909             209 aa            linear   BCT 02-MAR-2025
DEFINITION  SHIRT domain-containing protein, partial [Streptococcus
            pneumoniae].
ACCESSION   WP_235871909
VERSION     WP_235871909.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 209)
  AUTHORS   Whelan,F., Lafita,A., Gilburt,J., Degut,C., Griffiths,S.C.,
            Jenkins,H.T., St John,A.N., Paci,E., Moir,J.W.B., Plevin,M.J.,
            Baumann,C.G., Bateman,A. and Potts,J.R.
  TITLE     Periscope Proteins are variable-length regulators of bacterial cell
            surface interactions
  JOURNAL   Proc Natl Acad Sci U S A 118 (23) (2021)
   PUBMED   34074781
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037372.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18655.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..209
                     /product="SHIRT domain-containing protein"
     Region          24..104
                     /region_name="SHIRT"
                     /note="SHIRT domain; pfam18655"
                     /db_xref="CDD:465830"
ORIGIN      
        1 dypdgsstev svsvnvlpap etqtykvtyr fesatadnnl paevlsllpq sgtyttsssv
       61 aiafvpeapm pvevavangt wtflgyqeve egsnltfvgk wvfeakqdps pqpqpaptpq
      121 papqpnpvpp vnpggeqgtd nnqadrhqse qprkpeenpp aqgpagekek qatlpnagst
      181 aplsltglvt ssllvglavl llgrkrkdd
//
LOCUS       WP_235871808             138 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphonate C-P lyase system protein PhnG [Pelagimonas
            phthalicica].
ACCESSION   WP_235871808
VERSION     WP_235871808.1
KEYWORDS    RefSeq.
SOURCE      Pelagimonas phthalicica
  ORGANISM  Pelagimonas phthalicica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Pelagimonas.
REFERENCE   1  (residues 1 to 138)
  AUTHORS   Parker,G.F., Higgins,T.P., Hawkes,T. and Robson,R.L.
  TITLE     Rhizobium (Sinorhizobium) meliloti phn genes: characterization and
            identification of their protein products
  JOURNAL   J Bacteriol 181 (2), 389-395 (1999)
   PUBMED   9882650
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018464.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06754.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Pelagimonas phthalicica"
                     /db_xref="taxon:1037362"
     Protein         1..138
                     /product="phosphonate C-P lyase system protein PhnG"
                     /GO_process="GO:0015716 - organic phosphonate transport
                     [Evidence IEA]"
                     /GO_process="GO:0019634 - organic phosphonate metabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=14938
     Region          8..138
                     /region_name="PhnG"
                     /note="Phosphonate metabolism protein PhnG; cl01454"
                     /db_xref="CDD:470208"
ORIGIN      
        1 madtdpqldv laraapdklk hfaetligdl geidvlksrt glimlpmrdt aqgtvfhlge
       61 vlvseahira gdqqgygmrr ghdleaamam alvdlalqnd vqseacaafc dqaandqaae
      121 dretlrrvea trvnmetf
//
LOCUS       WP_235871937             262 aa            linear   BCT 02-MAR-2025
DEFINITION  squalene/phytoene synthase family protein [Pelagimonas
            phthalicica].
ACCESSION   WP_235871937
VERSION     WP_235871937.1
KEYWORDS    RefSeq.
SOURCE      Pelagimonas phthalicica
  ORGANISM  Pelagimonas phthalicica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Pelagimonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012705.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00494.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Pelagimonas phthalicica"
                     /db_xref="taxon:1037362"
     Protein         1..262
                     /product="squalene/phytoene synthase family protein"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=28819
     Region          7..256
                     /region_name="ERG9"
                     /note="Phytoene/squalene synthetase [Lipid transport and
                     metabolism]; COG1562"
                     /db_xref="CDD:441170"
ORIGIN      
        1 mndpfidnpd lvacaqivek gdperfqavm avpvaaravl fpiyamnvev srapwvtqeh
       61 miaemrlqww rdalaeiaeg glvrrhevvt plamvlprdm akrlddlvla rrwdiyrdtf
      121 edqaafedfi gntsgllmqa aaaalgdtdd rtayalgwas glasfltavp eleaagrvpl
      181 vdgrpeavra laqkgleklv earkfrgavp qaaraallsg wmarpilkra atqphlvaag
      241 tlmpseaaqr wrklwvsqtg rw
//
LOCUS       WP_235871944             627 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Pelagimonas phthalicica].
ACCESSION   WP_235871944
VERSION     WP_235871944.1
KEYWORDS    RefSeq.
SOURCE      Pelagimonas phthalicica
  ORGANISM  Pelagimonas phthalicica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Pelagimonas.
REFERENCE   1  (residues 1 to 627)
  AUTHORS   Zhang,Y.L., Arakawa,E. and Leung,K.Y.
  TITLE     Novel Aeromonas hydrophila PPD134/91 genes involved in O-antigen
            and capsule biosynthesis
  JOURNAL   Infect Immun 70 (5), 2326-2335 (2002)
   PUBMED   11953367
  REMARK    Erratum:[Infect Immun 2002 Jun;70(6):3308]
REFERENCE   2  (residues 1 to 627)
  AUTHORS   Swartley,J.S., Liu,L.J., Miller,Y.K., Martin,L.E., Edupuganti,S.
            and Stephens,D.S.
  TITLE     Characterization of the gene cassette required for biosynthesis of
            the (alpha1-->6)-linked N-acetyl-D-mannosamine-1-phosphate capsule
            of serogroup A Neisseria meningitidis
  JOURNAL   J Bacteriol 180 (6), 1533-1539 (1998)
   PUBMED   9515923
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025025.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13641.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Pelagimonas phthalicica"
                     /db_xref="taxon:1037362"
     Protein         1..627
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=69601
     Region          57..150
                     /region_name="T2SSE_N"
                     /note="Type II secretion system (T2SS), protein E,
                     N-terminal domain; pfam05157"
                     /db_xref="CDD:428339"
     Region          250..490
                     /region_name="CESA_like_2"
                     /note="CESA_like_2 is a member of the cellulose synthase
                     superfamily; cd06427"
                     /db_xref="CDD:133049"
     Site            341..343
                     /site_type="active"
                     /note="DXD motif [active]"
                     /db_xref="CDD:133049"
     Region          <404..>612
                     /region_name="nfrB"
                     /note="phage adsorption protein NrfB; PRK11234"
                     /db_xref="CDD:236884"
ORIGIN      
        1 mnthrltktd llaqqagskr glpvshilme sgqvssrvml galaeaerlk kpldhviaae
       61 aivsresvle aqaqhfgala lrrdvhppsa ematllsasf clekgvypwm rlgdtlvlat
      121 srpdsfaetl nelppglgpv mmaltleadi haeiaaqhga alarqaetwv paeascrdls
      181 rstgqtrlfs fiaaaicltl lawqpvlffa galilavisl slsqalkvaa ffalpkhrpa
      241 peaklpkdpp tvsilvplfk eqeiarslvt rlsrltypks lldivlvlee ddettqatla
      301 qtrlppwirv isvppgevtt kpralnyafr ftsgdiigiy daedapapdq idkvvdhfar
      361 aspkvgcvqg ildfynpran wlsrcfavey aswfrillpg varlgfavpl ggttvffrrp
      421 vleevcgwda hnvtedadlg lrlarhgyrt eliqtvtree annrfwpwir qrsrwlkgyg
      481 itwwvhtrnp rkllqdmgaw kffgvqlmfl ctliqftfap vlwtfwlilf glphplegmm
      541 tyqqalalta iflsaegitv ligfaalsrs phrslipwvp tmfayfplgt iaaykaiset
      601 vtkpfywdkt ehghshpddp gadlthh
//
LOCUS       WP_235872057             186 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Pelagimonas
            phthalicica].
ACCESSION   WP_235872057
VERSION     WP_235872057.1
KEYWORDS    RefSeq.
SOURCE      Pelagimonas phthalicica
  ORGANISM  Pelagimonas phthalicica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Pelagimonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025107.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13730.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Pelagimonas phthalicica"
                     /db_xref="taxon:1037362"
     Protein         1..186
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=20487
     Region          33..83
                     /region_name="HTH_36"
                     /note="Helix-turn-helix domain; pfam13730"
                     /db_xref="CDD:463970"
ORIGIN      
        1 mteqlpsksp rgnwvqtera aheawatlia kapkaaqlmh vltarvgdnn avvvsqknlm
       61 kltgtsrrtv qraldvlvkd rwievrqigq ngtvnayvin drvawsgkrd giryslfsat
      121 iiasddeqpd qhelgnqapl rklpslyrde hqlpfgegmp ppsepalpgm epdlpattlk
      181 pgedhe
//
LOCUS       WP_235872126             350 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4145 domain-containing protein [Siminovitchia acidinfaciens].
ACCESSION   WP_235872126
VERSION     WP_235872126.1
KEYWORDS    RefSeq.
SOURCE      Siminovitchia acidinfaciens
  ORGANISM  Siminovitchia acidinfaciens
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Siminovitchia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025027.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13643.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Siminovitchia acidinfaciens"
                     /db_xref="taxon:2321395"
     Protein         1..350
                     /product="DUF4145 domain-containing protein"
                     /calculated_mol_wt=40451
     Region          6..>171
                     /region_name="hsdR"
                     /note="type I restriction enzyme EcoKI subunit R;
                     Provisional; PRK11448"
                     /db_xref="CDD:236912"
ORIGIN      
        1 marelensiy ssprtmltha rtfaeailqq vmliekvadt pyitlkerid llsdneylnq
       61 eiidalhfir msgnkaahdt rkfryseall sweaiytivq wyievygpve ldipeyqdpe
      121 pdsgngfeia elearlknme nlikaslnqq qegtakdeva ataeeppqea elpgfttirs
      181 itykekslev pyflrdafll pqrfekserf lvklgaeqea rimselprdl eglhkqvkry
      241 nekndenlfe elkiyikeet arrktmldrp gelflfyked yvivteelak vplitdeftg
      301 spslfrqlnq dqietvgqlp relvilakye nvgvgtiekl feqlkgrqgv
//
LOCUS       WP_235872164             192 aa            linear   BCT 02-MAR-2025
DEFINITION  excalibur calcium-binding domain-containing protein [Siminovitchia
            acidinfaciens].
ACCESSION   WP_235872164
VERSION     WP_235872164.1
KEYWORDS    RefSeq.
SOURCE      Siminovitchia acidinfaciens
  ORGANISM  Siminovitchia acidinfaciens
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Siminovitchia.
REFERENCE   1  (residues 1 to 192)
  AUTHORS   Rigden,D.J., Jedrzejas,M.J. and Galperin,M.Y.
  TITLE     An extracellular calcium-binding domain in bacteria with a distant
            relationship to EF-hands
  JOURNAL   FEMS Microbiol Lett 221 (1), 103-110 (2003)
   PUBMED   12694917
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017691.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05901.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Siminovitchia acidinfaciens"
                     /db_xref="taxon:2321395"
     Protein         1..192
                     /product="excalibur calcium-binding domain-containing
                     protein"
                     /calculated_mol_wt=22357
ORIGIN      
        1 mkdhdfikvv klllilvfly llmlaieciv gsfwklflfl gillivlwcf yrkkkaksia
       61 kgvllliill lflvwsigpc vyerhfaele kteleekqra iqaekwekef eedmkkaqek
      121 dkeeydkrkv vkesneaeka ngistpvynf kedqdcsdfs nsteatefmk qsmkagfgdh
      181 rldrnkdgia cn
//
LOCUS       WP_235872186             382 aa            linear   BCT 02-MAR-2025
DEFINITION  M14 family zinc carboxypeptidase [Siminovitchia acidinfaciens].
ACCESSION   WP_235872186
VERSION     WP_235872186.1
KEYWORDS    RefSeq.
SOURCE      Siminovitchia acidinfaciens
  ORGANISM  Siminovitchia acidinfaciens
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Siminovitchia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012471.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00246.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Siminovitchia acidinfaciens"
                     /db_xref="taxon:2321395"
     Protein         1..382
                     /product="M14 family zinc carboxypeptidase"
                     /GO_function="GO:0004181 - metallocarboxypeptidase
                     activity [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=41933
     Region          40..382
                     /region_name="MpaA"
                     /note="Murein tripeptide amidase MpaA [Cell
                     wall/membrane/envelope biogenesis]; COG2866"
                     /db_xref="CDD:442113"
ORIGIN      
        1 mkkrflffiv fglifasafs ssvsaadtvp ggpstegnts yesvisydem ikglkqieht
       61 skgkvevftl ddygkseqdr siyvakvgsg pvkiwvqaqi hgdeklttga vmellktfgs
      121 ngskevktil enatiyaipm ynpdgslmnt rtttlydesg eprkdnrgrn mtidlnrdwa
      181 engfaakesl avykywadvk pdyavdlhhq glktvygtny stsmslgvsl apngptlpgi
      241 kgglyndltr qmsvyvydal kdyghmhidr yqtgsgekry eidikggvvs ammiglnydn
      301 inptghsnpa iffetkgntr dgnlgqksng hlekqnylgl kallyglatd evkqvdpdrw
      361 eeipayplag yqtdtgivpa gn
//
LOCUS       WP_235872212             256 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6651 domain-containing protein [Pseudomonas aeruginosa].
ACCESSION   WP_235872212
VERSION     WP_235872212.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042491.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20356.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..256
                     /product="DUF6651 domain-containing protein"
                     /calculated_mol_wt=27689
     Region          122..218
                     /region_name="DUF6651"
                     /note="Family of unknown function (DUF6651); pfam20356"
                     /db_xref="CDD:466506"
ORIGIN      
        1 magwpekdem klktvevdgk qyaevqdgkp vyveddgkei afdavgtrat itrlngeakq
       61 hreraekaek iakdfegied paaarkalet vanldakklv dageiekvka eigkaydtkl
      121 tevttraeql eqqlyaekig gsfsrskfva drlavpadmv qsvfgkhlkv edgnvvayda
      181 hgnklyskar pgeaadfdea leilvdqypy rdqilkgsgh sgggtppggk psgstaksla
      241 dckteaekva yletik
//
LOCUS       WP_235872346             444 aa            linear   BCT 02-MAR-2025
DEFINITION  alginate export family protein [Pseudoxanthomonas winnipegensis].
ACCESSION   WP_235872346
VERSION     WP_235872346.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
REFERENCE   1  (residues 1 to 444)
  AUTHORS   Whitney,J.C., Hay,I.D., Li,C., Eckford,P.D., Robinson,H.,
            Amaya,M.F., Wood,L.F., Ohman,D.E., Bear,C.E., Rehm,B.H. and
            Howell,P.L.
  TITLE     Structural basis for alginate secretion across the bacterial outer
            membrane
  JOURNAL   Proc Natl Acad Sci U S A 108 (32), 13083-13088 (2011)
   PUBMED   21778407
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024765.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13372.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..444
                     /product="alginate export family protein"
                     /calculated_mol_wt=50010
     Region          46..433
                     /region_name="Alginate_exp"
                     /note="Alginate export; cl16257"
                     /db_xref="CDD:472886"
ORIGIN      
        1 mlaagaaqaa gpqakllpye edysalgavs rtgwerlkyi pvgsgwlslg gesrtlydfr
       61 qdngfgrfat dphgywqqrf rlwadyrptp nlrlfgelas ssvaglrtrp vqatdrnald
      121 laqgfvelsg daavptwrlr agrqqiayaw qrlldprdpa nsrmpfdalr vlyqrpglsg
      181 gllwgrpvqt rvgsfddrsd daqrlwgahv ekplytgtqg aakleaiyld thqngrryag
      241 vvgedhrqtl strfsgtyar wdydleligq rghfagqrvr awqgslfagy sfdqawkprl
      301 glrmeassgd rrpgdgelnt fnglyarasv fdgsmlttnv ryfgpelvlr psdklwvdly
      361 vlklqrqslh dgvyaagwrv vqpgdanqar digvrkvmwv kyrfndfasl dvyvhhtsag
      421 aflregtreg rdyfyvapyl tlrf
//
LOCUS       WP_235872378             157 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3060 domain-containing protein [Pseudoxanthomonas
            winnipegensis].
ACCESSION   WP_235872378
VERSION     WP_235872378.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11259.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..157
                     /product="DUF3060 domain-containing protein"
                     /calculated_mol_wt=15928
     Region          98..153
                     /region_name="DUF3060"
                     /note="Protein of unknown function (DUF3060); pfam11259"
                     /db_xref="CDD:431765"
ORIGIN      
        1 mpgilaltac ggaspsasps aspaaaaqtl vdpasgaqcg gkdlrltrdr asvvidgacg
       61 avvitgshve lnlsqaqslr veghdisvln eklgqatvtg qrntlnltqv dlvqlegddn
      121 vvlatrigri rflgngntln psskpavedh grdnkvl
//
LOCUS       WP_235872418             353 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Pseudoxanthomonas winnipegensis].
ACCESSION   WP_235872418
VERSION     WP_235872418.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
REFERENCE   1  (residues 1 to 353)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016777.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04909.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..353
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=39610
     Region          23..348
                     /region_name="LigW"
                     /note="5-carboxyvanillate decarboxylase LigW (lignin
                     degradation), amidohydro domain [Carbohydrate transport
                     and metabolism]; COG2159"
                     /db_xref="CDD:441762"
ORIGIN      
        1 msapaeadat ppatyamddy arvrkfdahv hangtdpvfl qlarsdnfel lsinvdypdf
       61 ptleaqhrva lalareepqr fhwaasftmk gfgtpgwlar tnqsldaava egaravkvwk
      121 nigmvernar gelitlddpg lspvadhvqs lgvpliahqa epyncwlpld qmttdndrey
      181 fahhpdyymy lhpempshea lmaardrfva ahpqlrfvga hmasleydvd vlakfldthp
      241 natvdlaarm sqvqyqslrd pakvrdffvr yqdrllygtd ltqapdadpa afraeahamw
      301 tsdwrylatg esqridmlka dvpglalpra vidriyyana vrefglerqv aar
//
LOCUS       WP_235872431             265 aa            linear   BCT 02-MAR-2025
DEFINITION  HipA family kinase [Pseudoxanthomonas winnipegensis].
ACCESSION   WP_235872431
VERSION     WP_235872431.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042851.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20613.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..265
                     /product="HipA family kinase"
                     /calculated_mol_wt=29183
     Region          19..227
                     /region_name="HipA_2"
                     /note="HipA-like kinase; pfam20613"
                     /db_xref="CDD:466762"
ORIGIN      
        1 mspaapplkt vqatryvtpl reggslpavv eadddglyvl kfrgagqgpk alvaeliage
       61 laralelpvp eialveldre fartepdpei qdlirasegl nlgldylpga lnydpaamav
      121 eaqlasrivw fdafisnvdr tarnpnlmvw hrrpwlidhg aalyfhhdwe hagqacerpf
      181 vlirdhvllp fadqiaqada elaprltdal ieriaaavpd awlegepffa dvvahrqayv
      241 dylkrrrdar aafvqeaida haahv
//
LOCUS       WP_235872443             111 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Streptococcus
            pneumoniae].
ACCESSION   WP_235872443
VERSION     WP_235872443.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 111)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 111)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 111)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 111)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         1..111
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=12213
     Region          <1..107
                     /region_name="SunT"
                     /note="ABC-type bacteriocin/lantibiotic exporters, contain
                     an N-terminal double-glycine peptidase domain [Defense
                     mechanisms]; COG2274"
                     /db_xref="CDD:441875"
ORIGIN      
        1 mkfniiisem gsnisggqrq rialaralin npsivildea tsaldtinee ritkyiqsqg
       61 ctqiiiahrl stikdadiiv vmkggkives gnhkylmtlg geyyslytkr k
//
LOCUS       WP_235872475             323 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Pseudoxanthomonas
            winnipegensis].
ACCESSION   WP_235872475
VERSION     WP_235872475.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
REFERENCE   1  (residues 1 to 323)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 323)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 323)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..323
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=34790
     Region          <90..>244
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
ORIGIN      
        1 mhvasfdtsg sdwlasrvrr qiretpdlpr pgggetlerw ralarfgaes lplvkvmeah
       61 ydalailaea geprppadtl wavwaaggpt etvrydahag rvsgikpwcs gpqglishal
      121 vtvahddrrp laaitlapgt frldasqwsg pgmvgvptge ghfsaaaarl vstpefyler
      181 pgfwhggagi aacwfgaata iaervrrspg vsknpfcaah lgaidaqlta aqlmlrqlar
      241 didrqpqdsh ryavtgvrcf vdrvcrdvme raalalgpas lctdaehaqr cadlqafirq
      301 chgqrdeqwl gealhqaega wtl
//
LOCUS       WP_235872509             162 aa            linear   BCT 02-MAR-2025
DEFINITION  IS3 family transposase, partial [Streptococcus pneumoniae].
ACCESSION   WP_235872509
VERSION     WP_235872509.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024673.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13276.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..>162
                     /product="IS3 family transposase"
     Region          <7..>162
                     /region_name="transpos_IS3"
                     /note="IS3 family transposase; NF033516"
                     /db_xref="CDD:468052"
ORIGIN      
        1 pieggkrerr kteivqelmt efsldillka iklarstyyy hlkqldkpdk dqelkaeiqs
       61 ifiehkgnya yrriylelrn rgylvnhkrv qglmkvlnlq akmrqkrkys shkgdvgkka
      121 enliqgqfeg sktmeqcytd vteftipvst qklylspvld gf
//
LOCUS       WP_235872524             304 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4349 domain-containing protein [Pseudoxanthomonas
            winnipegensis].
ACCESSION   WP_235872524
VERSION     WP_235872524.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025616.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14257.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..304
                     /product="DUF4349 domain-containing protein"
                     /calculated_mol_wt=32646
     Region          86..294
                     /region_name="DUF4349"
                     /note="Domain of unknown function (DUF4349); pfam14257"
                     /db_xref="CDD:464117"
ORIGIN      
        1 mhmhlfeirp sampdstrgs vagfavprcr airvrgivrp npggsrgmrg wriallamva
       61 tmmgcaqqqa gapppvvgeq ggsgamlaye htlsieleqe qvptriaalr kaciasafga
      121 cnvlsivqar hggaltlriv pggvermtal agqggriasr rtqaedigka vqetqrdraq
      181 ledyarrlda laarkdlava dlialsreqa glaekrrmle ataatqqmrl dtnlvafdfa
      241 dprhdgrgal gdlgedmvag lkegigaalp glayclpfli lafplallww alwrrmtrrg
      301 qrkp
//
LOCUS       WP_235872598             286 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Pseudoxanthomonas winnipegensis].
ACCESSION   WP_235872598
VERSION     WP_235872598.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..286
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=30186
     Region          18..285
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(49,51..52,54,73..75,128..130,177..179,192,196,
                     222..225)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(153,179,192,196)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mpdyprppfp pqqqsfpgkt skmepkpdig edsyqghgll kgkrtlvtgg dsgigaaval
       61 afaregadva iaylpseqdd adqvaslmeq aggkvlkvac disqpsever lvgevksafg
      121 glevlvnnaa yqkyfqside vtleewrktf dtnvhgtfnl tkcalellge gasiintasv
      181 nskdptpnil pysttkgava nltlglaqwl aerkirvnav lpgpiwtpfi pagmaedkvk
      241 nfgsqtpfgr pgqpaelast yvmlasdsss ytsgalitia gaqavl
//
LOCUS       WP_235872525             357 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Pseudoxanthomonas winnipegensis].
ACCESSION   WP_235872525
VERSION     WP_235872525.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..357
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=39104
     Region          <157..296
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 malfapvsaq pdlsprvrli trdngvglrr dltimsrals gaqigsqala fggsrlgnhl
       61 rqartrlgal atgrietqvf leriyrsclp aarrnllvpn pewmldkwlp llprfegvlc
      121 ktrhaervfg algcdtryig ftsedrfdag vvrrraflhv agrrtakgte avvqawlrhp
      181 ewptltvvqs rdvprivapn idhrldyldd aqlrqlqnah afhlcpseae gfghylveal
      241 stgavvittd gepmnelvtp erglllqpsa qramalgtry rvdaeaieev veralslspq
      301 acaalgeaar tffldndaaf phrlalalqp sldagtpvpr rglarlatal lphhgpg
//
LOCUS       WP_235872615             154 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6491 family protein [Pseudoxanthomonas winnipegensis].
ACCESSION   WP_235872615
VERSION     WP_235872615.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039797.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20101.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..154
                     /product="DUF6491 family protein"
                     /calculated_mol_wt=16309
     Region          5..143
                     /region_name="DUF6491"
                     /note="Family of unknown function (DUF6491); pfam20101"
                     /db_xref="CDD:437933"
ORIGIN      
        1 mtrwtslpam altaallvag cattglsdtq rlalyrahag apqkdlsnad rligwtalgd
       61 eavavwtrpn eaylldlgns cnglnnatti litnllgqvs agmdrvtvfd rpggfhvscr
      121 iqsirrldtq airaseqalr eaklaereas dags
//
LOCUS       WP_235872659             288 aa            linear   BCT 02-MAR-2025
DEFINITION  OmpA family protein [Pseudoxanthomonas winnipegensis].
ACCESSION   WP_235872659
VERSION     WP_235872659.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012894.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00691.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..288
                     /product="OmpA family protein"
                     /calculated_mol_wt=31101
     Region          54..>131
                     /region_name="BamE"
                     /note="Outer membrane protein assembly factor BamE,
                     lipoprotein component of the BamABCDE complex [Cell
                     wall/membrane/envelope biogenesis]; COG2913"
                     /db_xref="CDD:442157"
     Region          <127..280
                     /region_name="OmpA"
                     /note="Outer membrane protein OmpA and related
                     peptidoglycan-associated (lipo)proteins [Cell
                     wall/membrane/envelope biogenesis]; COG2885"
                     /db_xref="CDD:442131"
ORIGIN      
        1 mdetqrgmrg mdkvtagskr wiawsallal alagcagapp resgaataae pefpdparay
       61 lrggtfvnvd nlrqyapgls krqlsallgp phfgegmwgv rtwnylfnfr sargqepfqc
      121 qfmvvfdeqd iaqqqywkpq tcsaildppa pkprqeaaav lpeqplrlsa dalfgfdsav
      181 vtaqgrarie gllqqvrgas qvqdilvvgy adrlgnarhn ltlsqrraea vrqvlveggv
      241 aasairaegr gstqpladca rikahkalva clapdrrvei sanatarr
//
LOCUS       WP_235872731             285 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Pseudoxanthomonas winnipegensis].
ACCESSION   WP_235872731
VERSION     WP_235872731.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00528.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..285
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=31098
     Region          4..279
                     /region_name="TM_PBP2"
                     /note="Transmembrane subunit (TM) found in Periplasmic
                     Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
                     transporters which generally bind type 2 PBPs. These types
                     of transporters consist of a PBP, two TMs, and two
                     cytoplasmic ABC ATPase subunits, and...; cl00427"
                     /db_xref="CDD:444901"
     Site            order(80..81,84..85,90,101..104,106..115,118..119,121,146,
                     148,150,152,155..156,158,162..163,166,183,197..198,201,
                     208..211,214..215,228..229,239..240,243..244,246..247,
                     250..251,254)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:119394"
     Site            order(107..121,208..213)
                     /site_type="active"
                     /note="conserved gate region [active]"
                     /db_xref="CDD:119394"
     Site            order(121,141,214,226,229,239)
                     /site_type="active"
                     /note="putative PBP binding loops [active]"
                     /db_xref="CDD:119394"
     Site            order(167..179,185..186,190)
                     /site_type="active"
                     /note="ABC-ATPase subunit interface [active]"
                     /db_xref="CDD:119394"
ORIGIN      
        1 msavgrarwp arvvlglgfs flylpvlllm lwsfnrsrla tvwagfsfkw ygellgdasi
       61 leaawvslri afwtatasvv lgtlaalamt rlrrfpgrtl fggliaaplv mpdviiglsm
      121 llmfvslgev fhfqpkgmvs iwiahttfal afvavlvssr maeldrslee aamdlganrv
      181 kvfflitlpi iapalvsgwl laftlslddv viasfvsgpd sttlpmkvfs svrlglspki
      241 nalatlmiva vslcaflgww lmsrseqrrk rdrqlalrgg ddgrs
//
LOCUS       WP_235872758             387 aa            linear   BCT 02-MAR-2025
DEFINITION  SIS domain-containing protein [Pseudoxanthomonas winnipegensis].
ACCESSION   WP_235872758
VERSION     WP_235872758.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
REFERENCE   1  (residues 1 to 387)
  AUTHORS   Bateman,A.
  TITLE     The SIS domain: a phosphosugar-binding domain
  JOURNAL   Trends Biochem Sci 24 (3), 94-95 (1999)
   PUBMED   10203754
REFERENCE   2  (residues 1 to 387)
  AUTHORS   Teplyakov,A., Obmolova,G., Badet-Denisot,M.A., Badet,B. and
            Polikarpov,I.
  TITLE     Involvement of the C terminus in intramolecular nitrogen channeling
            in glucosamine 6-phosphate synthase: evidence from a 1.6 A crystal
            structure of the isomerase domain
  JOURNAL   Structure 6 (8), 1047-1055 (1998)
   PUBMED   9739095
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013539.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01380.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..387
                     /product="SIS domain-containing protein"
                     /GO_function="GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA]"
                     /GO_process="GO:1901135 - carbohydrate derivative
                     metabolic process [Evidence IEA]"
                     /calculated_mol_wt=41111
     Region          20..385
                     /region_name="agaS_fam"
                     /note="putative sugar isomerase, AgaS family; TIGR02815"
                     /db_xref="CDD:131862"
ORIGIN      
        1 mtktvpellg vpeaeleash aiwtareiaq qprllrrtha liadlhaqlq afaapiandp
       61 aarviltgag tsayigqcla plldralaar vdavpttdlv capqlyldpa qplllisfgr
      121 sgnspesiaa velteslvgd vrhlvvtcna qgklatapvr qamtvtlpee thdtsfamts
      181 sfscmmyaal aallpagald ariapiaqat eaviqdalpl lqslanarhd rvvylgsglf
      241 qglareatlk lgeltngava tcydsplgfr hgpktfvtak tlvvvfvsnd pytrrydhdl
      301 idelrrdgva arvieisarp rsddadtlav pglaqaadvd llwpyvaaaq iyaflharvr
      361 gvtpdnpnpa givnrvvqgv rlyales
//
LOCUS       WP_235872800             286 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Pseudoxanthomonas winnipegensis].
ACCESSION   WP_235872800
VERSION     WP_235872800.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..286
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=30278
     Region          18..285
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(49,51..52,54,73..75,128..130,177..179,192,196,
                     222..225)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(153,179,192,196)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mpdyprppfp pqqqsfpgkt skmdprpdig edsyeghgll kgkrtlvtgg dsgigaaval
       61 afaregadva iaylpseqdd adqvaslmeq agvkvlkvac disqpsever lvgevksafg
      121 gldvlvnnaa yqkyfqside vtleewrktf dtnvhgtfyl tkcalellge gasiintasv
      181 nskdptpnil pysttkgava nltlglaqwl aerkirvnav lpgpiwtpfi pagmaedkvk
      241 nfgsqtpfgr pgqpaelast yvmlasdsss ytsgalitia gaqavl
//
LOCUS       WP_235872791              82 aa            linear   BCT 02-MAR-2025
DEFINITION  HNH endonuclease [Pseudoxanthomonas winnipegensis].
ACCESSION   WP_235872791
VERSION     WP_235872791.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
REFERENCE   1  (residues 1 to 82)
  AUTHORS   Zhang,L., Huang,Y., Xu,D., Yang,L., Qian,K., Chang,G., Gong,Y.,
            Zhou,X. and Ma,K.
  TITLE     Biochemical characterization of a thermostable HNH endonuclease
            from deep-sea thermophilic bacteriophage GVE2
  JOURNAL   Appl Microbiol Biotechnol 100 (18), 8003-8012 (2016)
   PUBMED   27131500
REFERENCE   2  (residues 1 to 82)
  AUTHORS   Dalgaard,J.Z., Klar,A.J., Moser,M.J., Holley,W.R., Chatterjee,A.
            and Mian,I.S.
  TITLE     Statistical modeling and analysis of the LAGLIDADG family of
            site-specific endonucleases and identification of an intein that
            encodes a site-specific endonuclease of the HNH family
  JOURNAL   Nucleic Acids Res 25 (22), 4626-4638 (1997)
   PUBMED   9358175
REFERENCE   3  (residues 1 to 82)
  AUTHORS   Shub,D.A., Goodrich-Blair,H. and Eddy,S.R.
  TITLE     Amino acid sequence motif of group I intron endonucleases is
            conserved in open reading frames of group II introns
  JOURNAL   Trends Biochem Sci 19 (10), 402-404 (1994)
   PUBMED   7817395
REFERENCE   4  (residues 1 to 82)
  AUTHORS   Gorbalenya,A.E.
  TITLE     Self-splicing group I and group II introns encode homologous
            (putative) DNA endonucleases of a new family
  JOURNAL   Protein Sci 3 (7), 1117-1120 (1994)
   PUBMED   7920259
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013964.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01844.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..82
                     /product="HNH endonuclease"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=9027
     Region          <20..54
                     /region_name="HNHc"
                     /note="HNH nucleases; HNH endonuclease signature which is
                     found in viral, prokaryotic, and eukaryotic proteins. The
                     alignment includes members of the large group of homing
                     endonucleases, yeast intron 1 protein, MutS, as well as
                     bacterial colicins, pyocins, and...; cl00083"
                     /db_xref="CDD:469607"
ORIGIN      
        1 mwlaspselg lkpskgrsfq ctaehlvaqq dggkdlpenv vaacflcnvr rhrrkgqapn
       61 pipykahvqr rlvkgkwhss sp
//
LOCUS       WP_235872812             596 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA cytosine methyltransferase [Pseudoxanthomonas winnipegensis].
ACCESSION   WP_235872812
VERSION     WP_235872812.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012372.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00145.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..596
                     /product="DNA cytosine methyltransferase"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=65068
     Region          6..>232
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
     Region          <508..563
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
ORIGIN      
        1 mpefeirhas lfsglgggsk gfnqarpdig taharfrcig gidsdaaair dferltgskg
       61 tvldlfdrdq yrafhgaepp pswreattsd ihvafgherp hivflsapck gfsglmsetk
      121 sqttkyqaln rltlrgmwlv leayrddpve mfvfenvpri asrgrhlldq ivqllqhygy
      181 vvnetthdcg elgnlaqsrk rfllvarhae kvppflyepv rrplrsvgev lgrmampgdv
      241 eragplhrvp alqwktwvrl afvqagsdwr slnrlhvedg qlrdylivpe frrgfcgvnq
      301 wgepsgtvag kslptngafs vadpraaega aqyqqygvlr mdetagavig vkspgqgtfs
      361 vadpihhgpp khndqyrvvr werptgtvts ahgsaacvqd prattgfegk gkyrvtgyae
      421 pagtviarsd tgqgayavad prprnqrapg dayvtnghyg vvpwaapsga isssaghdng
      481 hfsvadprlp aatdklvcvi raeddtwhrp fttlelaalq slvdpeekle ldglsdqawr
      541 erignavppa aaraiaeemg rtlllawtgq tfalgstpiw vrdvalaltl parseq
//
LOCUS       WP_235872851             626 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-L-arabinofuranosidase domain-containing protein
            [Pseudoxanthomonas winnipegensis].
ACCESSION   WP_235872851
VERSION     WP_235872851.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
REFERENCE   1  (residues 1 to 626)
  AUTHORS   Ito,T., Saikawa,K., Kim,S., Fujita,K., Ishiwata,A., Kaeothip,S.,
            Arakawa,T., Wakagi,T., Beckham,G.T., Ito,Y. and Fushinobu,S.
  TITLE     Crystal structure of glycoside hydrolase family 127
            beta-l-arabinofuranosidase from Bifidobacterium longum
  JOURNAL   Biochem Biophys Res Commun 447 (1), 32-37 (2014)
   PUBMED   24680821
REFERENCE   2  (residues 1 to 626)
  AUTHORS   Fujita,K., Takashi,Y., Obuchi,E., Kitahara,K. and Suganuma,T.
  TITLE     Characterization of a novel beta-L-arabinofuranosidase in
            Bifidobacterium longum: functional elucidation of a DUF1680 protein
            family member
  JOURNAL   J Biol Chem 289 (8), 5240-5249 (2014)
   PUBMED   24385433
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019556.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07944.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..626
                     /product="beta-L-arabinofuranosidase domain-containing
                     protein"
                     /calculated_mol_wt=68020
     Region          3..607
                     /region_name="HybA1"
                     /note="Beta-L-arabinofuranosidase, GH127 family
                     [Carbohydrate transport and metabolism]; COG3533"
                     /db_xref="CDD:442754"
ORIGIN      
        1 msavlrfpsp grvrmggvlg eaieasrkgr lshfivdahs paialfdpar aegnhegdwy
       61 gehagkwlia aaraaahqgd dvlrarvlev adhlaaiqra dgylgtsape rrftvpqppr
      121 pwswdgapal rtwdvwthay lvlglieawr lggrpahlea araigrlcha afveggldit
      181 tcgnhfgmsa tvlldgavel flvtddpqfl elarriveqa dhnpplalvq rllagvdase
      241 igtgkayqll wnaaalakla hatgdatllp alerlwanvh dhhlslgggp wggaglrsre
      301 cfnppfvfdp qgyvetcstl awlqftrell awtgharyvd aiertalndl lgamaadgqd
      361 wcyysfgngr rthttywrcc kssgamamee lpmlayatsa rdvrvnlfvp gevvfddgpa
      421 pglrivqqgq gevpmrvelt lqpahsstfa lalrqpawsa pvqvridgel qdaradddgy
      481 vrlqrqwqig trieiafsar pqlqrranrn vqesrapdgs pvaqevlrhd yvavswgpla
      541 yatalaegds papdlplsga sldaqldpag apgaeialal pggirrlspf wrvgdrrdgs
      601 whatwfrlpl taedgttspt ncrsrt
//
LOCUS       WP_235872878             302 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Pseudoxanthomonas
            winnipegensis].
ACCESSION   WP_235872878
VERSION     WP_235872878.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
REFERENCE   1  (residues 1 to 302)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..302
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=32128
     Region          7..300
                     /region_name="LysR"
                     /note="DNA-binding transcriptional regulator, LysR family
                     [Transcription]; COG0583"
                     /db_xref="CDD:440348"
     Region          <189..250
                     /region_name="PBP_like"
                     /note="PBP superfamily domain; pfam12727"
                     /db_xref="CDD:463683"
ORIGIN      
        1 mnsthglnlh llrvfaavve hdgfsraaea lfvsqsavsk alrelehqld lplidrsggr
       61 gvrltesgqa lyrhargifa leraaleevr ervglrrggl rigasttvaa ywlaeafarh
      121 aarhpqldsa lvvgntgeva ealidcrida gfvegpphde rilatrwrde plqavvaaas
      181 tlgaqrrasa rqlaaqrwlv reagsgtrev aqsllaargi vpartleigg neaiaravaa
      241 gdgvailpaa vvadliavgr lralalppgp alqrplyrle lanrprspal aaflaamerr
      301 ea
//
LOCUS       WP_235872932             253 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6776 family protein [Pseudoxanthomonas winnipegensis].
ACCESSION   WP_235872932
VERSION     WP_235872932.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042896.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20567.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..253
                     /product="DUF6776 family protein"
                     /calculated_mol_wt=27631
     Region          76..221
                     /region_name="DUF6776"
                     /note="Family of unknown function (DUF6776); pfam20567"
                     /db_xref="CDD:466716"
ORIGIN      
        1 msandppnga prpasegphl lpvsrgarlt vyallgvlvl algfgvwglw tvfapgarqa
       61 ptaaqwqatq grvhdleqqv atlsrsdqis reanrdlqat lsdreeqiag lradvafyer
      121 fvgataqrrg lavhelklqp qtdqawhfta tltqnlnrga vnrgrlqlsv egtragklet
      181 ldwgrlrqqp qadgmaysfk yfqqiegeiv lppdfkplrv tarlqpdnse rvdqsftwaq
      241 aagaqddaaq psg
//
LOCUS       WP_235872680             508 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6065 family protein [Pseudoxanthomonas winnipegensis].
ACCESSION   WP_235872680
VERSION     WP_235872680.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
REFERENCE   1  (residues 1 to 508)
  AUTHORS   Burgard,C., Zaburannyi,N., Nadmid,S., Maier,J., Jenke-Kodama,H.,
            Luxenburger,E., Bernauer,H.S. and Wenzel,S.C.
  TITLE     Genomics-Guided Exploitation of Lipopeptide Diversity in
            Myxobacteria
  JOURNAL   ACS Chem Biol 12 (3), 779-786 (2017)
   PUBMED   28128551
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039976.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19541.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..508
                     /product="DUF6065 family protein"
                     /calculated_mol_wt=55382
     Region          3..240
                     /region_name="DUF6065"
                     /note="Family of unknown function (DUF6065); pfam19541"
                     /db_xref="CDD:437373"
     Region          301..497
                     /region_name="Cupin_8"
                     /note="Cupin-like domain; pfam13621"
                     /db_xref="CDD:463936"
ORIGIN      
        1 mdltcyvypg wrprlraasp rrawmdaspe gfayrclplg ianahgwell spcgfeahwn
       61 ggplpqdvri qadpgtpahe apvalfgqgt ftfhvpglfr tspghnlwvg gspnqakdgv
      121 aplggvietd wapytftmnw rftraghvvr feenepvafl fplpralldg vvpriapide
      181 apelkrrfeq wsqardafqa qvaatphaap gakwqkfyfr gtdadgtpga adhrsklrlp
      241 gfeggaswpt aapacphara aapalpqhdp aqvlsrlqrl ralsarnrqv prrgglatgv
      301 fldehyaanw pvllageiee gqgrwtpqal asthggaplv daqgrpgtle rfvrlalqpa
      361 dtpgwqprlt galealpdla prlghltrll sgrdqgrlwl eaagsgtlaa pescnrlllq
      421 lygqrriwla ppgeaarlep laragtlgdl tapdlterlp qlrglelham llqpgdalfv
      481 pfgwwrqsaa erfsvsvare dfrwpnpp
//
LOCUS       WP_235872971             468 aa            linear   BCT 02-MAR-2025
DEFINITION  alginate export family protein [Pseudoxanthomonas winnipegensis].
ACCESSION   WP_235872971
VERSION     WP_235872971.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
REFERENCE   1  (residues 1 to 468)
  AUTHORS   Whitney,J.C., Hay,I.D., Li,C., Eckford,P.D., Robinson,H.,
            Amaya,M.F., Wood,L.F., Ohman,D.E., Bear,C.E., Rehm,B.H. and
            Howell,P.L.
  TITLE     Structural basis for alginate secretion across the bacterial outer
            membrane
  JOURNAL   Proc Natl Acad Sci U S A 108 (32), 13083-13088 (2011)
   PUBMED   21778407
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024765.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13372.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..468
                     /product="alginate export family protein"
                     /calculated_mol_wt=52483
     Region          70..460
                     /region_name="Alginate_exp"
                     /note="Alginate export; cl16257"
                     /db_xref="CDD:472886"
ORIGIN      
        1 mavqdgagrv ssarrlrrls gwaamlaaga aqaagpqakl lpyeedysal gavsrtgwer
       61 lkyipvgsgw lslggesrtl ydfrqdngfg rfatdphgyw qqrfrlwady rptpnfrlfg
      121 elasssvagl qtrpvqatdr naldlaqgfv elsgdgaapt wrlragrqqi ayawqrlldp
      181 rdpansrmpf dalrvlyqrp glsggllwgr pvqtrvgsfd drsddaqrlw gahvekplyt
      241 gtqgaaklea iylethqngr ryagvvgedh rqtlstrfsg tyarwdydle migqrghfag
      301 qrvrawqgsl fagysfdqaw kprlglrmea ssgdrrpgdg elntfnglya rasvfdgsmm
      361 ttnvryfgpe lvlrpsdklw vdlyvlklqr qslhdgvyaa gwrvvqpgda nqardigvrk
      421 vmwvkyrfnd fasldvyvhh tsagaflheg tregrdsfyv apyltlrf
//
LOCUS       WP_235873005             302 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Pseudoxanthomonas
            winnipegensis].
ACCESSION   WP_235873005
VERSION     WP_235873005.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
REFERENCE   1  (residues 1 to 302)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..302
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=32158
     Region          7..300
                     /region_name="LysR"
                     /note="DNA-binding transcriptional regulator, LysR family
                     [Transcription]; COG0583"
                     /db_xref="CDD:440348"
     Region          <189..250
                     /region_name="PBP_like"
                     /note="PBP superfamily domain; pfam12727"
                     /db_xref="CDD:463683"
ORIGIN      
        1 mnsthglnlh llrvfaavve hdgfsraaea lfvsqsavsk alrelehqld lplidrsggr
       61 gvrltesgqa lyrhargifa leraaleevr ervglrrggl rigasttvaa ywlaeafarh
      121 aarhpqldsa lvvgntgeva ealidcrida gfvegpphde rilatrwrde plqavvaaas
      181 tlgaqrrasa rqlaaqrwlv reagsgtrev aqsllaargi vpartleigg neaiaravaa
      241 gdgvailpaa vvadliavgr lrtlalppgp alqrplyrle lanrprspal aaflaamerr
      301 ea
//
LOCUS       WP_235873060              65 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5522 domain-containing protein [Flavobacterium oreochromis].
ACCESSION   WP_235873060
VERSION     WP_235873060.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 65)
  AUTHORS   Ito,T., Matsubara,D., Tanaka,I., Makiya,K., Tanei,Z.I., Kumagai,Y.,
            Shiu,S.J., Nakaoka,H.J., Ishikawa,S., Isagawa,T., Morikawa,T.,
            Shinozaki-Ushiku,A., Goto,Y., Nakano,T., Tsuchiya,T., Tsubochi,H.,
            Komura,D., Aburatani,H., Dobashi,Y., Nakajima,J., Endo,S.,
            Fukayama,M., Sekido,Y., Niki,T. and Murakami,Y.
  TITLE     Loss of YAP1 defines neuroendocrine differentiation of lung tumors
  JOURNAL   Cancer Sci 107 (10), 1527-1538 (2016)
   PUBMED   27418196
REFERENCE   2  (residues 1 to 65)
  AUTHORS   Schmidt,J., Braggio,E., Kortuem,K.M., Egan,J.B., Zhu,Y.X.,
            Xin,C.S., Tiedemann,R.E., Palmer,S.E., Garbitt,V.M., McCauley,D.,
            Kauffman,M., Shacham,S., Chesi,M., Bergsagel,P.L. and Stewart,A.K.
  TITLE     Genome-wide studies in multiple myeloma identify XPO1/CRM1 as a
            critical target validated using the selective nuclear export
            inhibitor KPT-276
  JOURNAL   Leukemia 27 (12), 2357-2365 (2013)
   PUBMED   23752175
REFERENCE   3  (residues 1 to 65)
  AUTHORS   Chan,C.X., Reyes-Prieto,A. and Bhattacharya,D.
  TITLE     Red and green algal origin of diatom membrane transporters:
            insights into environmental adaptation and cell evolution
  JOURNAL   PLoS One 6 (12), e29138 (2011)
   PUBMED   22195008
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037605.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17653.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..65
                     /product="DUF5522 domain-containing protein"
                     /calculated_mol_wt=7613
     Region          5..51
                     /region_name="DUF5522"
                     /note="Family of unknown function (DUF5522); pfam17653"
                     /db_xref="CDD:435947"
ORIGIN      
        1 mnndlnpnnl kegedfyytp egykcfteky hlkrgyccks gcrhcpygfd kktgiikktn
       61 pfwhi
//
LOCUS       WP_235873062            1261 aa            linear   BCT 02-MAR-2025
DEFINITION  GEVED domain-containing protein [Flavobacterium oreochromis].
ACCESSION   WP_235873062
VERSION     WP_235873062.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 1261)
  AUTHORS   Back,C.R., Sztukowska,M.N., Till,M., Lamont,R.J., Jenkinson,H.F.,
            Nobbs,A.H. and Race,P.R.
  TITLE     The Streptococcus gordonii Adhesin CshA Protein Binds Host
            Fibronectin via a Catch-Clamp Mechanism
  JOURNAL   J Biol Chem 292 (5), 1538-1549 (2017)
   PUBMED   27920201
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039776.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20009.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1261
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..1261
                     /product="GEVED domain-containing protein"
                     /calculated_mol_wt=136935
     Region          70..>502
                     /region_name="AidA"
                     /note="Autotransporter adhesin AidA [Cell
                     wall/membrane/envelope biogenesis, Intracellular
                     trafficking, secretion, and vesicular transport]; COG3468"
                     /db_xref="CDD:442691"
     Region          434..511
                     /region_name="GEVED"
                     /note="GEVED domain; pfam20009"
                     /db_xref="CDD:466256"
ORIGIN      
        1 mkefyriknd lfllvflvlf ivenrgqvss ynfsesngty vsisgtaamn pgwdentvpn
       61 ipigftfnfn nsnytactis sngfitfgst sptnslynpi sstisytgai saigadlidg
      121 gtkaitystt gtapyrifti qwddarrysg ngnfdfqikl yettntisvv ygicsptgtt
      181 tteninvevg lrgtsntdfn nrnktnhsnw altttkgtfn tdscttngss apsngltftw
      241 apiqtcltpt aqpsalvltp gtttiagnfa aaspspnsyl vvrsntsikp npingtfypi
      301 gstalganyv vidtdsntsf ndsglitsts yyyhifsynn tsctggpkyn ttnplsastt
      361 tttnftyctp sssssnryin slesvgtvtt yannntgysp ggygnyrhin lftqiqgggv
      421 nllatlpdkp nsqtiriwid wnnkdglfnn tnelvyttgs iytelkntlg ftiphtipag
      481 tytlrirtfs sntldpcnny sggetedyti tiladcsaki naatsgtscg agpvtlqayg
      541 ttditefrwy dsvtnilegt spstivsgqa tttwitpsln tsktyivkgy ngtcqsyynt
      601 fvdaeikstt einvaasapt icgensqvki tatvgetkfn lltetfseld isdtnfrvtq
      661 tlnntsytna twklypspsv pisttvfkpa issgniddrf alttsdyynl tmtsrmitkn
      721 tvstvgctta tlsfrhyysd fdntdtaavy ystlaspdpa nsshwtllim ynsdqglahs
      781 ftsasyslpv giqnlsikfe ykgtwaegwa iddvyinatk pfipnylwnn ssgivyidtn
      841 ndnvgdtpyt nqnvssiyfa pnglamesps wstsvksltp ngcvstvpis itnttrtwkg
      901 tinnnwdiag nwapafvpda ttcviipsta kiigtaysgy gknltikstg dlelqadnnl
      961 iitdwmdikn ggvfnvrnna nfvqkndnps pantisgtft mdrtaiglka ldyiywsspv
     1021 nnfpvtsvsp nsltskiyhw vtdypnpngf gfgnwfntte nmqagkgyii rvannnptfs
     1081 ttftgaprng iitktiargp yigsdyrgst griitnlddn lnlignpyps aidaieflte
     1141 nqsvleggiq iwthkgtisn snpspfyqnf ssnysysdyl tytklgssig sstgadtgfn
     1201 gkiaagqgfl vkmkdgnalt anitfknsmr tddlnraynn sqfyrttdnk kknkqiefgl
     1261 i
//
LOCUS       WP_235873072             453 aa            linear   BCT 02-MAR-2025
DEFINITION  pyridoxal-phosphate dependent enzyme [Flavobacterium oreochromis].
ACCESSION   WP_235873072
VERSION     WP_235873072.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012512.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00291.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..453
                     /product="pyridoxal-phosphate dependent enzyme"
                     /calculated_mol_wt=50194
     Region          4..450
                     /region_name="cysta_beta"
                     /note="cystathionine beta-synthase; TIGR01137"
                     /db_xref="CDD:273464"
ORIGIN      
        1 mqyaknilet igntplvkln kvtaeiealv lakvetfnpg nsvkdrmaik miedaekdgr
       61 lkpggtiieg tsgntgmgla lgaiikgykl icvisdkqsk ekcdilravg akvvvcptdv
      121 eptdprsyys vskrlaeetp nawyvnqydn psnalahyeq tgpeiwkqte gkithfvvgv
      181 gtggtisgva kylkeknpni kiwgidtygs vfkkyhetgi fdeneiysyi tegigedilp
      241 knvdfslidg ftkvtdkdaa vytrkialee gifvgnsaga aikgllqlkd efkpddvvvv
      301 lfhdsgsryv gkmfnddwmr ergfleeelt kaedlikdhi ekplvivrte elvshaierm
      361 rkykisqipv idvngfvgsi desdlfqsyi ldkntadrpi revmgapfpi vakgtpieev
      421 sklitkdnqa vlvdlgdekh hiitkydiin sik
//
LOCUS       WP_235873098             301 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Pseudoxanthomonas
            winnipegensis].
ACCESSION   WP_235873098
VERSION     WP_235873098.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
REFERENCE   1  (residues 1 to 301)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..301
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=33064
     Region          1..>33
                     /region_name="HTH_1"
                     /note="Bacterial regulatory helix-turn-helix protein, lysR
                     family; pfam00126"
                     /db_xref="CDD:459683"
     Region          4..>96
                     /region_name="PRK10082"
                     /note="hypochlorite stress DNA-binding transcriptional
                     regulator HypT"
                     /db_xref="CDD:182228"
     Region          86..283
                     /region_name="PBP2_CrgA_like"
                     /note="The C-terminal substrate binding domain of
                     LysR-type transcriptional regulator CrgA and its related
                     homologs, contains the type 2 periplasmic binding domain;
                     cd08422"
                     /db_xref="CDD:176114"
     Site            order(96,100,139,153,155,218,235,262)
                     /site_type="active"
                     /note="putative effector binding pocket [active]"
                     /db_xref="CDD:176114"
     Site            order(97..98,102..103,105..106,109,113,115..121,182,
                     212..216,223..224,227)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176114"
ORIGIN      
        1 mqtfvrivea gslsaaaaql gasqptvsrr lqalerllgl kllrrstham tltedgarcy
       61 dkardllqdw qaleddlrga gqapqgllrv vvphafgqrq lmepmadylr rypqvsvdwl
      121 lherepdfva dnidcaihvg tvmdpsvvav qiaevprivv gapellegre apdaietlra
      181 lpwlainlfy rndislthrq dgrqchfpir prlstdslha lrtaalaglg aciasawlva
      241 edvaagrllh lapdwratpl pvhlvyppar hqpaklqrfi elmrlaganm agveplrgra
      301 g
//
LOCUS       WP_235873114             473 aa            linear   BCT 02-MAR-2025
DEFINITION  phage portal protein [Flavobacterium oreochromis].
ACCESSION   WP_235873114
VERSION     WP_235873114.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 473)
  AUTHORS   Chaban,Y., Lurz,R., Brasiles,S., Cornilleau,C., Karreman,M.,
            Zinn-Justin,S., Tavares,P. and Orlova,E.V.
  TITLE     Structural rearrangements in the phage head-to-tail interface
            during assembly and infection
  JOURNAL   Proc Natl Acad Sci U S A 112 (22), 7009-7014 (2015)
   PUBMED   25991862
REFERENCE   2  (residues 1 to 473)
  AUTHORS   Lebedev,A.A., Krause,M.H., Isidro,A.L., Vagin,A.A., Orlova,E.V.,
            Turner,J., Dodson,E.J., Tavares,P. and Antson,A.A.
  TITLE     Structural framework for DNA translocation via the viral portal
            protein
  JOURNAL   EMBO J 26 (7), 1984-1994 (2007)
   PUBMED   17363899
REFERENCE   3  (residues 1 to 473)
  AUTHORS   Lurz,R., Orlova,E.V., Gunther,D., Dube,P., Droge,A., Weise,F., van
            Heel,M. and Tavares,P.
  TITLE     Structural organisation of the head-to-tail interface of a
            bacterial virus
  JOURNAL   J Mol Biol 310 (5), 1027-1037 (2001)
   PUBMED   11501993
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016988.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05133.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..473
                     /product="phage portal protein"
                     /calculated_mol_wt=52782
     Region          72..469
                     /region_name="Phage_prot_Gp6"
                     /note="Phage portal protein, SPP1 Gp6-like; cl19531"
                     /db_xref="CDD:418597"
ORIGIN      
        1 mekeillqll ltepekavek iratgkniee iskyqkeykq hdrsvrdtqv aniqkdkmag
       61 tgtkkrlvka vripinfpkk ivttsvsfev gkpvtlvpse dnnlskliaq lwkvnridsl
      121 iqklvllkks etqgalqlyi kdigpssils kmlakigiks qakeikskll dnntgkmtpf
      181 fdasgnmtlf mweystfnse gkeiinieiw deknchklst etgklaysdt pkphgfdrip
      241 ivyvsqdepe wfdvkelidr lettlsklga sndytaypll qifgeiksfp ekddtgkvlh
      301 fpikvdedtn kpihgkaefl tannsvdrsk leiesllslv ysisntpnts fdnvkgigsv
      361 sgvamklmfl daiikaysne gdnrtmieri inimiggvit ttnqslskea ttlyfdvifn
      421 silpddlkel vettstavqs gimskktavg klnqtddnas eleeikndks vva
//
LOCUS       WP_235873135              82 aa            linear   BCT 02-MAR-2025
DEFINITION  Cas9 inhibitor AcrIIA9 family protein [Flavobacterium oreochromis].
ACCESSION   WP_235873135
VERSION     WP_235873135.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 82)
  AUTHORS   Uribe,R.V., van der Helm,E., Misiakou,M.A., Lee,S.W., Kol,S. and
            Sommer,M.O.A.
  TITLE     Discovery and Characterization of Cas9 Inhibitors Disseminated
            across Seven Bacterial Phyla
  JOURNAL   Cell Host Microbe 25 (2), 233-241 (2019)
   PUBMED   30737174
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025424.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14058.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..82
                     /product="Cas9 inhibitor AcrIIA9 family protein"
                     /calculated_mol_wt=9379
     Region          6..>49
                     /region_name="PcfK"
                     /note="PcfK-like protein; pfam14058"
                     /db_xref="CDD:464076"
ORIGIN      
        1 mntspafkka iqnylekras edelfaityk kenksidecc nyilecakkg kqldmlmkkc
       61 mggrliitmk ttlrilkqll vm
//
LOCUS       WP_235873152             678 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Flavobacterium oreochromis].
ACCESSION   WP_235873152
VERSION     WP_235873152.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024867.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13476.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..678
                     /product="AAA family ATPase"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /GO_process="GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /calculated_mol_wt=77311
     Region          6..>63
                     /region_name="COG3950"
                     /note="Predicted ATP-binding protein involved in virulence
                     [General function prediction only]"
                     /db_xref="CDD:443150"
     Region          9..156
                     /region_name="AAA_23"
                     /note="AAA domain; pfam13476"
                     /db_xref="CDD:463890"
     Region          <265..>556
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
ORIGIN      
        1 mrtinikkiq linfkgiknl tidfdnktdi lgangtgktt iadaftwllf gkdstdrkef
       61 eiktldevgn vipmidhevs aelivdseil tikrvlrenw vkkrgyeere fggnkidlyw
      121 nevpmtitef nkkintllde qvfkmitspt yfnsikwpdr rnllidifge vsnedvargn
      181 safekllakl tqgktlddyk aqilasikka kedlknipsr idevfrgkpe aqdfevlekq
      241 kasleiqlnk vdleisdvnk afdsklasqr eqklrvnnlk sdleiieqna kkeaenrlks
      301 dtsildslvk qktdkeqelq syesalktlk tkkegiedqi sstekqmedk rqqwheennk
      361 tlefdtddct cptckqalpt gdieakksqa itnfnttklt nirrieaegt nlkaqkenle
      421 aeiktfeari etgkgsvena ktqlqeiiyk iesenstsse mqtfecvyes lissnkeyqe
      481 ksielskfke sneevgltvd nseliekrks lvfeidnlks klqtkaqies aeiriaelqq
      541 eektlaqqia nvekeqfiie nfikakvnal edvvnskfkf vkfkmfdqqi nggfkdtcev
      601 tvngvpysdi ntaskinagl dvinvlsefy gisapifidn aesvhtlidt ksqlirlvvs
      661 endtklritt keleiaql
//
LOCUS       WP_235873214             206 aa            linear   BCT 02-MAR-2025
DEFINITION  leucine-rich repeat domain-containing protein [Flavobacterium
            oreochromis].
ACCESSION   WP_235873214
VERSION     WP_235873214.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 206)
  AUTHORS   Kobe,B. and Deisenhofer,J.
  TITLE     The leucine-rich repeat: a versatile binding motif
  JOURNAL   Trends Biochem Sci 19 (10), 415-421 (1994)
   PUBMED   7817399
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024209.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12799.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..206
                     /product="leucine-rich repeat domain-containing protein"
                     /calculated_mol_wt=23129
     Region          29..50
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          32..>124
                     /region_name="PPP1R42"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     cl42388"
                     /db_xref="CDD:455733"
     Region          51..72
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          73..94
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          95..116
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          117..137
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
ORIGIN      
        1 mpnltvldmr tsvlfdpdkl tslnkfenle vlnlnntild siealgnltn lktlsldety
       61 ldqisgldkl kkleilslle ndipeiegle gltnlrylnl sknpiskieg leglknieii
      121 hlgyteittv ekehfkgiak dcivnfgvgd afksidkelp snitiayeyh eygnyscdte
      181 evdkfmdaak arliedikkq emssql
//
LOCUS       WP_235873196             509 aa            linear   BCT 02-MAR-2025
DEFINITION  YwqJ-related putative deaminase [Flavobacterium oreochromis].
ACCESSION   WP_235873196
VERSION     WP_235873196.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 509)
  AUTHORS   Iyer,L.M., Zhang,D., Rogozin,I.B. and Aravind,L.
  TITLE     Evolution of the deaminase fold and multiple origins of eukaryotic
            editing and mutagenic nucleic acid deaminases from bacterial toxin
            systems
  JOURNAL   Nucleic Acids Res 39 (22), 9473-9497 (2011)
   PUBMED   21890906
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025787.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14431.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..509
                     /product="YwqJ-related putative deaminase"
                     /calculated_mol_wt=57713
     Region          362..497
                     /region_name="YwqJ-deaminase"
                     /note="YwqJ-like deaminase; pfam14431"
                     /db_xref="CDD:373065"
ORIGIN      
        1 mkkiyfyvia lwsiffvtsg faqctfsela kdfsrntalk dfvktdakaf dawyllnkek
       61 pslrnslpev kivaenfqev knaggyqkwi dklsteeknv pilfldsqqk feqtvdvsnl
      121 pkhlrslayq yykkannenk lhlwqrleei fkeykingnw ppynggynie sgislqkfqk
      181 ydryanpigs wdginepllg gnftspiidn kpfdfssral nipesnytfy yeieiledlg
      241 fdgeladvip wfnqkgqgkq vkwnipkdpt tgrpktwnkl aeegkvriti kdipngnpdl
      301 ikkwkgyvig kkvnnagnei kllgsskitn isgltatens ivytegnkii edvagmfknd
      361 rpgagsvlvk dskftsavsn ktglpegqlp eglhplvkew fqnpninaee ltkrlthgkc
      421 aepdavskwl ydyeqktkia iqnmtdarna lkgtksiafe tttkyvksdg rkiisaeigd
      481 vkiactscnp fleyfgieei kvninikfe
//
LOCUS       WP_235873263             387 aa            linear   BCT 02-MAR-2025
DEFINITION  SIS domain-containing protein [Pseudoxanthomonas winnipegensis].
ACCESSION   WP_235873263
VERSION     WP_235873263.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
REFERENCE   1  (residues 1 to 387)
  AUTHORS   Bateman,A.
  TITLE     The SIS domain: a phosphosugar-binding domain
  JOURNAL   Trends Biochem Sci 24 (3), 94-95 (1999)
   PUBMED   10203754
REFERENCE   2  (residues 1 to 387)
  AUTHORS   Teplyakov,A., Obmolova,G., Badet-Denisot,M.A., Badet,B. and
            Polikarpov,I.
  TITLE     Involvement of the C terminus in intramolecular nitrogen channeling
            in glucosamine 6-phosphate synthase: evidence from a 1.6 A crystal
            structure of the isomerase domain
  JOURNAL   Structure 6 (8), 1047-1055 (1998)
   PUBMED   9739095
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013539.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01380.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..387
                     /product="SIS domain-containing protein"
                     /GO_function="GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA]"
                     /GO_process="GO:1901135 - carbohydrate derivative
                     metabolic process [Evidence IEA]"
                     /calculated_mol_wt=41166
     Region          20..385
                     /region_name="agaS_fam"
                     /note="putative sugar isomerase, AgaS family; TIGR02815"
                     /db_xref="CDD:131862"
ORIGIN      
        1 mtktvpellg vpeaeleash aiwtareiaq qprllrrtha liadlhaqlq afaapiandp
       61 aarviltgag tsayigqcla plldralaar vdavpttdlv capqlyldpa qplllisfgr
      121 sgnspesiaa velteslvrd vrhlvvtcna qgklatapvr qamtvtlpee thdtsfamts
      181 sfscmmyaal aallpagald ariapiaqat eaviqdalpl lqalanarhd rvvylgsglf
      241 qglareatlk lgeltngava tcydsplgfr hgpktfvtak tlvvvfvsnd pytrrydhdl
      301 idelrrdgva arvieisarp rsddadtlav pglaqaadvd llwpyvaaaq iyaflharvr
      361 gvtpdnpnpa givnrvvqgv qlyales
//
LOCUS       WP_235873277            1725 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Flavobacterium oreochromis].
ACCESSION   WP_235873277
VERSION     WP_235873277.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024642.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13245.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..1725
                     /product="AAA family ATPase"
                     /calculated_mol_wt=201584
     Region          366..>436
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Region          372..581
                     /region_name="AAA_11"
                     /note="AAA domain; pfam13086"
                     /db_xref="CDD:404072"
     Site            388..394
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          <963..1315
                     /region_name="DNA2"
                     /note="Superfamily I DNA and/or RNA helicase [Replication,
                     recombination and repair]; COG1112"
                     /db_xref="CDD:440729"
     Region          1344..1454
                     /region_name="MTES_1575"
                     /note="REase_MTES_1575; pfam18741"
                     /db_xref="CDD:465853"
ORIGIN      
        1 mkvlnqyitf lkeykkller gvkdvlnstv ssnfiwidei ehfvksgice stlidvfspk
       61 fkkqhlifsl qkpykpniqi pnrfleiief deaknkfesi ngdeeelvsf qnstegkvei
      121 eklkkfkknk etysklyray ndikndsnle ivlsvgfiqy sklnnngnls ktnqhlfhfp
      181 laldidsnni vkisfsdlen pyadffflnn tpiekevlsn iidrfekkit elgyeyifes
      241 efkdliaksi qkisnnsefd nsiyrpesdh fredyfkvlf spainikqrk prffekltds
      301 iikyndenei eaklfnllvr npessgnnsy tkpnyfkdel fethkskakn lngdddfsvf
      361 fplpynkeqk qiyenylknr ltvvtgppgt gkshtivnil csllaqgkrv lvtaqtdkal
      421 eslldkipet fddliftkiq letnpnrfsl eksigniski lsdnfylnve akieeldnlk
      481 aeyvklksei iralekeyte frindsfqnl rayqivekfe skeseewnwi qdelsneail
      541 nfeiikneil kykqligtei rynnainidi ssilknlesf dfknfqsiqe qyikqlnylg
      601 lneyskdkvl niqleniakv anefsnsdiv lknikelenl qkqlnnkvfq esvtinksfs
      661 nltengtkyl ldietylsfa engkagfftk lansnfkqvs yleqftvngk kcnnkteilq
      721 lksaienlii inknftllkq ngfsfsyddn snlyeksivl kevlkkietn kevvskiqfn
      781 adfinlseyt kinlfdidnl srkaivlkdn idklgkingq lienlqilkn idsiieqssl
      841 knefskflpv enigeaqdfe llksrfleig kqieleqtfl nlkkylrdll pntfdslesi
      901 pnhyiskenf eyasanrfik enefidlqec keelsfinqk ifqvkcdilf dlaksnfksk
      961 fqedelnyfi nllrqykitl eqgnrnirnn trfqilarqh siaiskklsc wvmkfndvln
     1021 svgeepeifd ciivdeasql dfnslilgyy aknmiivgdd kqtspssltg ansddfdsik
     1081 nkyldylgqn vvfirsdlsl fslagmiagt anlelkehfr cvpeliefsk kefynnslrp
     1141 lkqinsnrln pketvfvkda ftedqivyke ieeikkflqr ilkdeqyakk sigvvslgla
     1201 khteklkdik edlanefgkd kidkhkiiie dspkfqgder dvmivslgva ldfqklkenq
     1261 nakpraiiss qdefkkinva lsrakeqmil fhsvehsdlq ttdfrnkils ffkdeakpvs
     1321 qlqidnnnie rfrhnvpepf dswfecdiak aliengysyi qpqynvkeae lfynhklgkq
     1381 vyinfkidlv vhnngkmiai ecdgdpfhsl pedvaydier qeflervgwk vyrvlysafk
     1441 rnqqeeiqki idfiekntkk eyktiidtti kpdveiefek qeeiskyvlp ehksyidile
     1501 enseisnsvn qlndtvkkhe sfidriekdl eesnhtnqis sdnktlcyfn lfrnntykiq
     1561 efseenclys laidekykng fllqcydngh vnkvyvksil kkkmnytysy gknpnakilc
     1621 lklieedtii slkikrgsdi ffkahkteki tnreilhlqg ykvlyqdsds ieykilpkni
     1681 spyiqkllfn sftaegksvn nnyyeeewki iseyipklte indnn
//
LOCUS       WP_235873309             811 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3772 domain-containing protein [Pseudoxanthomonas
            winnipegensis].
ACCESSION   WP_235873309
VERSION     WP_235873309.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas winnipegensis
  ORGANISM  Pseudoxanthomonas winnipegensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024021.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12607.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Pseudoxanthomonas winnipegensis"
                     /db_xref="taxon:2480810"
     Protein         1..811
                     /product="DUF3772 domain-containing protein"
                     /calculated_mol_wt=86228
     Region          <41..>201
                     /region_name="sbcc"
                     /note="exonuclease SbcC; TIGR00618"
                     /db_xref="CDD:129705"
     Region          132..194
                     /region_name="DUF3772"
                     /note="Protein of unknown function (DUF3772); pfam12607"
                     /db_xref="CDD:432664"
     Region          533..801
                     /region_name="MscK"
                     /note="Small-conductance mechanosensitive channel MscK
                     [Cell wall/membrane/envelope biogenesis]; COG3264"
                     /db_xref="CDD:442495"
ORIGIN      
        1 msfhsvsraa rrlwllsall vlaagqalaq gpaapapsvd ealqqiddal stlqdqskde
       61 qvpenlhalg lqvadaqrqa daqalalqpq ldeiderlkq lgdlapgtre asdiaaerkq
      121 lqashdrldg aikrakllsv eaqqlgdaie kararqlseq lfarvaspls ptlwrqmaqa
      181 wpddvqrlra vgqdlmqalq qgvathgtap latgiaiall illpgalalr wvgqryviqr
      241 tpggrlrrsa lavwtlvlgt alptiaawvl idtlraiqai pedldglada vvrvtffsaf
      301 vgatsaalll prqpswrllp fdddtavklg ryawltsvav wlsgmltaln rvartnpvtg
      361 vgvdgvialv fvalviamlv sllrihrgpv eaaaeggeaa asavpqrrsg vvvlvsllaq
      421 lvvaaalvga vlgyvnfara atqqiiwavv vcgaggllmm faddlsqwlf kpdsrfgkaa
      481 svglglrssh meqaavltaa varlwlvlmv igallvpyga nftsitdwia qarkawsasg
      541 lplqpwdvlr avlvaliglt lvkaahrwlv rtylpstele lstrasvaav mrylgitvva
      601 lcvlvtlgld mtklaivasa lsvgigfglq aitqnfisgl ilmaerpvki gdwvrigdae
      661 gdvrrinvrs teiqvsdrst livpnsdlit ktirnmtmag plgrvqlqfs vplgtdvaav
      721 rtllldlyaa henvlaepap svfidsiagg miainsfayv pspratygtr sdlffqllqa
      781 ladaqialvt pqdvrivdaa ppatgqehap g
//
LOCUS       WP_235873312             278 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6929 family protein [Flavobacterium oreochromis].
ACCESSION   WP_235873312
VERSION     WP_235873312.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047073.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22000.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..278
                     /product="DUF6929 family protein"
                     /calculated_mol_wt=31392
ORIGIN      
        1 mekiklspfl nlegigaasg iifhnknlyi isdnsgflfe yalesnqlsk hvlipcatvn
       61 iekknkpdfe aitlkgtelh ifgsasttkr nkkiifnldn sisteidytp iyaelknifs
      121 isdedlnieg alyienslll fqrgnsinst ngifnirqsi kernfdvsfh pitlpqiqhi
      181 ettftdaiei dekiyflata edtfstyhdg dilgtilgim nsrtfeiekh illssnhkle
      241 gitlfsknkt eltflvcedn dteelnttiy klivnteh
//
LOCUS       WP_235873386             138 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Flavobacterium oreochromis].
ACCESSION   WP_235873386
VERSION     WP_235873386.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 138)
  AUTHORS   Das,A.K., Cohen,P.W. and Barford,D.
  TITLE     The structure of the tetratricopeptide repeats of protein
            phosphatase 5: implications for TPR-mediated protein-protein
            interactions
  JOURNAL   EMBO J 17 (5), 1192-1199 (1998)
   PUBMED   9482716
REFERENCE   2  (residues 1 to 138)
  AUTHORS   Lamb,J.R., Tugendreich,S. and Hieter,P.
  TITLE     Tetratrico peptide repeat interactions: to TPR or not to TPR?
  JOURNAL   Trends Biochem Sci 20 (7), 257-259 (1995)
   PUBMED   7667876
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019339.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07719.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..138
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=15690
     Region          1..>88
                     /region_name="BamD"
                     /note="Outer membrane protein assembly factor BamD,
                     BamD/ComL family [Cell wall/membrane/envelope biogenesis];
                     COG4105"
                     /db_xref="CDD:443281"
     Site            order(33,36..37,40..41,43,67,70..71,74..75,77..78,101,
                     104..105,108..109,112)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          33..60
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <46..>135
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          65..95
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mkkiifaitf lssvitfaqd keilenaltp eqeklfdkgi eklnakkyte aieslnklis
       61 snkkqissyy ylaqayfenk qytdcveact kglaigpnen llnyyrakan iklgeinsic
      121 edvkkseake eellkych
//
LOCUS       WP_235873421             356 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2931 family protein [Flavobacterium oreochromis].
ACCESSION   WP_235873421
VERSION     WP_235873421.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022602.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11153.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..356
                     /product="DUF2931 family protein"
                     /calculated_mol_wt=41279
     Region          <98..186
                     /region_name="DUF2931"
                     /note="Protein of unknown function (DUF2931); pfam11153"
                     /db_xref="CDD:431686"
ORIGIN      
        1 mdklkqlafv lvlmltlscn tmkeappqwt pemcqpninn degiynielv edeiytlegk
       61 sasmpfggss gvwgssgksy tdqygtpiga tivyyagyed kfyrldakfd vekmkklvke
      121 ihyhkesyly qedlnpdepy kigmfealif gfapqgmvvv wagypgakie vgrfqakeit
      181 nkeedkafek rlfaswsmnr aqvrardfmp nascalwdty rkrynigldv ssenkkfrlf
      241 ykewesfnge ficyfrpeil kptpesralp kvivfdwetg ykdhyrglvf lneetifdhf
      301 knipegsthr faikiaadns dmelfvdntk ievdsmriwp ineageykds ykenek
//
LOCUS       WP_235873472             207 aa            linear   BCT 02-MAR-2025
DEFINITION  outer membrane beta-barrel protein [Flavobacterium oreochromis].
ACCESSION   WP_235873472
VERSION     WP_235873472.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024895.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13505.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..207
                     /product="outer membrane beta-barrel protein"
                     /calculated_mol_wt=22360
     Region          4..181
                     /region_name="OMP_b-brl"
                     /note="Outer membrane protein beta-barrel domain;
                     pfam13505"
                     /db_xref="CDD:463903"
ORIGIN      
        1 mknfliatai litssafaqk gsfyvggqvg ysstktkves ttlsegttwn fspevgtflt
       61 nniqlgvgft tqgtkrdiqn rekeekenqy ggtiysryff gegsnafrpf vgvnvgllpg
      121 nstviiknns asietknntf elntnlnagf gyalspkitv vgslgllgft shtskdsktn
      181 vkaetntfnf dlnslgnrfn vglyytl
//
LOCUS       WP_235873457             347 aa            linear   BCT 02-MAR-2025
DEFINITION  SH3 domain-containing protein [Flavobacterium oreochromis].
ACCESSION   WP_235873457
VERSION     WP_235873457.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019844.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08239.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..347
                     /product="SH3 domain-containing protein"
                     /calculated_mol_wt=38483
     Region          <35..88
                     /region_name="Rhs_assc_core"
                     /note="RHS repeat-associated core domain; TIGR03696"
                     /db_xref="CDD:274730"
     Region          274..>340
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
ORIGIN      
        1 mvrsfligtd tvkttvtdsk dkekddqikg egnslnytfr mhdprvgrff ardplsfnfp
       61 wnspyafsen rvmdgreleg sevtlidpkk datiyneavk ntdksavhvy mhgspssfdl
      121 tgngkwtdkp gefkavleks dvyknakste kivvvlhscr tgrsffkeng qylkaiaqki
      181 saeypnlili apdergafip gkelgprkit naknkradpv dgehgkvdin tpghwnlfeg
      241 gewkgqfdad yngmsapsaw dymfnytdvd vtitgittvn nlkvrttagy gnnvikqlpk
      301 gsslnltgkv dgawkeislg gdkkgwvnss yveenvsvev gdkkknk
//
LOCUS       WP_235873563             216 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3828 domain-containing protein [Flavobacterium oreochromis].
ACCESSION   WP_235873563
VERSION     WP_235873563.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024287.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12883.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..216
                     /product="DUF3828 domain-containing protein"
                     /calculated_mol_wt=25345
     Region          99..>158
                     /region_name="DUF3828"
                     /note="Protein of unknown function (DUF3828); cl21673"
                     /db_xref="CDD:419781"
ORIGIN      
        1 myngkkwvsd fkqrsffvha eyikantyai yrihhlknqk lkyekkslli vpilficckg
       61 eikddynnkn skgkileqqs vndksnlkdt tivsidegvk flkkfynkfy ydenknfsfs
      121 dqkeflskei ndkinslnsn penleldydp fikaqdydgv sikktinctk eaeifvvtfv
      181 nfeedgevrl eyklaknrlg kieivnilnd sllrik
//
LOCUS       WP_235873553             416 aa            linear   BCT 02-MAR-2025
DEFINITION  alginate export family protein [Flavobacterium oreochromis].
ACCESSION   WP_235873553
VERSION     WP_235873553.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 416)
  AUTHORS   Whitney,J.C., Hay,I.D., Li,C., Eckford,P.D., Robinson,H.,
            Amaya,M.F., Wood,L.F., Ohman,D.E., Bear,C.E., Rehm,B.H. and
            Howell,P.L.
  TITLE     Structural basis for alginate secretion across the bacterial outer
            membrane
  JOURNAL   Proc Natl Acad Sci U S A 108 (32), 13083-13088 (2011)
   PUBMED   21778407
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024765.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13372.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..416
                     /product="alginate export family protein"
                     /calculated_mol_wt=47242
     Region          22..383
                     /region_name="Alginate_exp"
                     /note="Alginate export; cl16257"
                     /db_xref="CDD:472886"
ORIGIN      
        1 mkpvyltiag lfsslafsqq fnvnadlrar lenrngygtl kpfnekaatf isqrtritfd
       61 ynynniklva spqnvrtwgd vltnsksdtg infheaygev kindkfsfkl grqeiayddq
      121 rifgsidwam qakshdallf kfspsikqii hlgiaynank etnfkenyip sqykslqyaw
      181 yngsfkdlnl sllvlnngms ylsngeekid ysqtfgprlv fkrnnlsidg atylqtgkin
      241 annimasyfs aninykfiqa flaglgieyl sgknqddtst diksfnplhg tnhkfngymd
      301 yfyvgnhinn vgltdlyinf qyekdkfsar ltphyflssa niyqlgekkd nylgteidft
      361 asykllenvt idggfsqmfa tnsmeiikgg nknngnnwaf lsikinpnlf ntslkn
//
LOCUS       WP_235873515             443 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease subunit S [Flavobacterium oreochromis].
ACCESSION   WP_235873515
VERSION     WP_235873515.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 443)
  AUTHORS   Janscak,P. and Bickle,T.A.
  TITLE     The DNA recognition subunit of the type IB restriction-modification
            enzyme EcoAI tolerates circular permutions of its polypeptide chain
  JOURNAL   J Mol Biol 284 (4), 937-948 (1998)
   PUBMED   9837717
REFERENCE   2  (residues 1 to 443)
  AUTHORS   Bickle,T.A. and Kruger,D.H.
  TITLE     Biology of DNA restriction
  JOURNAL   Microbiol Rev 57 (2), 434-450 (1993)
   PUBMED   8336674
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01420.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..443
                     /product="restriction endonuclease subunit S"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=51235
     Region          39..204
                     /region_name="Methylase_S"
                     /note="Type I restriction modification DNA specificity
                     domain; pfam01420"
                     /db_xref="CDD:396139"
     Region          <126..213
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
     Site            order(137,140..141,143..144,172,174,180,184,187..188,209,
                     211..212)
                     /site_type="other"
                     /note="TRD-CR/TRD-CR interface [polypeptide binding]"
                     /db_xref="CDD:341131"
     Region          257..432
                     /region_name="RMtype1_S_EcoN10ORF171P_TRD2-CR2_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit TRD-CR, similar to Escherichia coli N10-0505 S
                     subunit (S.EcoN10ORF171P) TRD2-CR2, and Herpetosiphon
                     aurantiacus S subunit (S.HauORF5277P) TRD2-CR2; cd17287"
                     /db_xref="CDD:341176"
     Site            order(366..367,370,402..404,407..408,411..412,415..416,
                     420,422..423,426..427,429..430)
                     /site_type="other"
                     /note="putative TRD-CR/TRD-CR interface [polypeptide
                     binding]"
                     /db_xref="CDD:341176"
ORIGIN      
        1 mmnninkyky lnffdfhsli twdvkknife sklefensvk lseilkihrk pvsrkevekn
       61 qyqiiskidf ggnlflrefd eiknykgnlf evpknsiiys kinvrhgciy yndlkpfvvs
      121 neypcfifnd niinadflil llrssyfkkq ldslkvgvgk arvkieefls vtiplpsiee
      181 qkklvedyqn kkqiaehlen eaknlkneld yqlgisniki esnvgklnfv dfkliekwgl
      241 dqifkshtky ngkfktvkvi eicsvssggt psrnnksyyn gnipwiktge vlddvifdte
      301 ekitseaikn ssaklypkgs liiamygqgk trgrtaklgi dattnqacav lfninneivi
      361 tdylwiylmn eyermrelat gnnqpnlnad miknypvvip pmdiqlkiie eyniiknkqn
      421 qnlqnaealr keaiinfena ifn
//
LOCUS       WP_235873624             391 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2586 family protein [Flavobacterium oreochromis].
ACCESSION   WP_235873624
VERSION     WP_235873624.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 391)
  AUTHORS   Jiang,F., Li,N., Wang,X., Cheng,J., Huang,Y., Yang,Y., Yang,J.,
            Cai,B., Wang,Y.P., Jin,Q. and Gao,N.
  TITLE     Cryo-EM Structure and Assembly of an Extracellular Contractile
            Injection System
  JOURNAL   Cell 177 (2), 370-383 (2019)
   PUBMED   30905475
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022218.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10758.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..391
                     /product="DUF2586 family protein"
                     /calculated_mol_wt=42289
     Region          3..387
                     /region_name="Phage_sheath_1"
                     /note="Phage tail sheath protein subtilisin-like domain;
                     cl01389"
                     /db_xref="CDD:470182"
ORIGIN      
        1 mslpnikfni sknglglata eiqkipglil tgvtvsgtnk vtagvayqif sleeaenlgi
       61 eatgtnafah khiaafygea qkgaelwfmv vpgtitltem adltnpyakk llsdakgkir
      121 vlgflkksgt tetitdglda dvhtavvkaq vladdfasry fpvrtvisgn kfsgtvadlk
      181 dysttefnrv sillanndgs keasiglflg rhaiipsqrk vsrvkdgaie plaayftngg
      241 pvesldtawd aisnknyifl rgfanrsgyw ltgdqtltlp tddfkiqsrg lvmdeavlia
      301 ydtmieelsd eipvtesgtv hpaiikgwqn kiesninrnm iqvgklssak afidenqavl
      361 tnneiviqlq llpvgysdfi tinigfttki e
//
LOCUS       WP_235873691             221 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxypeptidase-like regulatory domain-containing protein
            [Flavobacterium oreochromis].
ACCESSION   WP_235873691
VERSION     WP_235873691.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 221)
  AUTHORS   Cho,K.H. and Salyers,A.A.
  TITLE     Biochemical analysis of interactions between outer membrane
            proteins that contribute to starch utilization by Bacteroides
            thetaiotaomicron
  JOURNAL   J Bacteriol 183 (24), 7224-7230 (2001)
   PUBMED   11717282
REFERENCE   2  (residues 1 to 221)
  AUTHORS   Shipman,J.A., Berleman,J.E. and Salyers,A.A.
  TITLE     Characterization of four outer membrane proteins involved in
            binding starch to the cell surface of Bacteroides thetaiotaomicron
  JOURNAL   J Bacteriol 182 (19), 5365-5372 (2000)
   PUBMED   10986238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025092.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13715.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..221
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /calculated_mol_wt=24797
     Region          5..98
                     /region_name="COG3411"
                     /note="2Fe-2S ferredoxin [Energy production and
                     conversion]"
                     /db_xref="CDD:442637"
     Region          143..216
                     /region_name="CarbopepD_reg_2"
                     /note="CarboxypepD_reg-like domain; pfam13715"
                     /db_xref="CDD:433425"
ORIGIN      
        1 mskdlskikk iiylcngtcc tdngaeeniq tlrkslteqa lneeihtirt kcqgfckkgp
       61 iiniqpentw ykemnvqtsn dlvtthilkn tklndhllfs ssntieqlip kknkthiltr
      121 lfniicfsll lflsptlqsq stisgyvida tnqnkiegat irikesgqst isqengayki
      181 esisegakti iishmgynsl nlnlnfkktn kkrlilpcci m
//
LOCUS       WP_235873727             209 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein [Flavobacterium
            oreochromis].
ACCESSION   WP_235873727
VERSION     WP_235873727.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 209)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..209
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=25004
     Region          3..>200
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mkltlpqldi yfeqliypee aiynigakis iegilnfevf ekayiqlikq hdtyrsclkv
       61 esnqvdfvvi eevrpleyid fteeiyeees vldfmqkefk kpfdiendkf lyrfvlikva
      121 enkhflfsvy hhiitdgwgt slmftrlvkn yneilelgev tseypftyqn fveddkkyfe
      181 spqfstdkky wvdkfstlpe slfeknrss
//
LOCUS       WP_235873385             363 aa            linear   BCT 02-MAR-2025
DEFINITION  MauE/DoxX family redox-associated membrane protein [Flavobacterium
            oreochromis].
ACCESSION   WP_235873385
VERSION     WP_235873385.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 363)
  AUTHORS   van der Palen,C.J., Reijnders,W.N., de Vries,S., Duine,J.A. and van
            Spanning,R.J.
  TITLE     MauE and MauD proteins are essential in methylamine metabolism of
            Paracoccus denitrificans
  JOURNAL   Antonie Van Leeuwenhoek 72 (3), 219-228 (1997)
   PUBMED   9403107
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018942.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07291.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..363
                     /product="MauE/DoxX family redox-associated membrane
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0030416 - methylamine metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=41305
ORIGIN      
        1 mkknliillr iiiallfivs aiakmypspy faistfevkq lyplgfseti apwfsrtlig
       61 iemalgilil qnnyfkkiii pstiillaif iihlsyetfi nggnsgncgc fgelipmtpi
      121 eaiiknivai iiliillsif pknneethkf wpisiislas iigifilapi ksgselslpt
      181 diqtdsthti tidssfikkd siiyqktnkd svikttqkte eekiinepik kksgyaqffs
      241 kidngrktlc ffvpgcdhcr qaakeltelk rinkkfpeil vlfmneepek ipdffketga
      301 eypykiieii pfwkllgtgk dtpgvkylwn gneykyyfgi nenqfnpkdy qelinksftq
      361 lnk
//
LOCUS       WP_235873746             329 aa            linear   BCT 02-MAR-2025
DEFINITION  endo alpha-1,4 polygalactosaminidase [Flavobacterium oreochromis].
ACCESSION   WP_235873746
VERSION     WP_235873746.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 329)
  AUTHORS   Naumov,D.G. and Stepushchenko,O.O.
  TITLE     [Endo-alpha-1-4-polygalactosaminidases and their homologues:
            structure and evolution]
  JOURNAL   Mol Biol (Mosk) 45 (4), 703-714 (2011)
   PUBMED   21954604
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015500.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03537.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..329
                     /product="endo alpha-1,4 polygalactosaminidase"
                     /calculated_mol_wt=37708
     Region          <39..146
                     /region_name="Spherulin4"
                     /note="Spherulation-specific family 4; cl46812"
                     /db_xref="CDD:481152"
     Region          204..>327
                     /region_name="Spherulin4"
                     /note="Spherulation-specific family 4; cl46812"
                     /db_xref="CDD:481152"
ORIGIN      
        1 mkikfliiat vvllsscynd nddtisksqe siesidfkqk mrefvigisq ysktmnpnfy
       61 vipqngielv sttgdlsgfp hsnyldaida ngqedlfyss endnqatpsd rteylkklln
      121 isknsgnkil iidfcstntd isdsysqnnn nnytsfatte iglnsipptp inqendsnvv
      181 nidnakifly iinpthyksk sefiaavnkt nydliimdlf fkgipftase inqlknkeng
      241 gkrlvisyms igeaesyryy wqsnwalnkp nwldeenpew kgnfkvkywd qnwqniiygn
      301 nnsylkkild anfdgvyldm idsfdyytk
//
LOCUS       WP_235873789             128 aa            linear   BCT 02-MAR-2025
DEFINITION  RNA-binding domain-containing protein, partial [Streptococcus
            pneumoniae].
ACCESSION   WP_235873789
VERSION     WP_235873789.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 128)
  AUTHORS   Al-Marsoummi,S., Vomhof-DeKrey,E.E. and Basson,M.D.
  TITLE     Schlafens: Emerging Proteins in Cancer Cell Biology
  JOURNAL   Cells 10 (9), 2238 (2021)
   PUBMED   34571887
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 128)
  AUTHORS   Chen,J. and Kuhn,L.A.
  TITLE     Deciphering the three-domain architecture in schlafens and the
            structures and roles of human schlafen12 and serpinB12 in
            transcriptional regulation
  JOURNAL   J Mol Graph Model 90, 59-76 (2019)
   PUBMED   31026779
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016232.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04326.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         1..>128
                     /product="RNA-binding domain-containing protein"
     Region          6..>45
                     /region_name="COG2865"
                     /note="Predicted transcriptional regulator, contains HTH
                     domain [Transcription]"
                     /db_xref="CDD:442112"
     Region          106..>128
                     /region_name="HTH_Tnp_4"
                     /note="Helix-turn-helix of DDE superfamily endonuclease;
                     pfam13613"
                     /db_xref="CDD:463934"
ORIGIN      
        1 mdlkfegvdl eykkaknnlp esfwetysaf antnggkiil gideknidty qrvnrlpakq
       61 nyeaskqltd arfkrlvgvq rttfeemlav lktayqlkha kggrkpklsl edllmatlqy
      121 vreyrtye
//
LOCUS       WP_235873793             225 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein [Flavobacterium
            oreochromis].
ACCESSION   WP_235873793
VERSION     WP_235873793.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 225)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..225
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /calculated_mol_wt=25975
     Region          1..>106
                     /region_name="GumC"
                     /note="Exopolysaccharide export protein/domain GumC/Wzc1
                     [Cell wall/membrane/envelope biogenesis]; COG3206"
                     /db_xref="CDD:442439"
ORIGIN      
        1 mqnnfmpvee nineinikqi lnkflrnwyw fvilillcll lskiylryat ptyqastkvl
       61 ikdgesgglv selsvledig glggaknkid deieilksrn iirkallsgg fyidyyaigr
      121 ikstnlygks pikilfenke kidldttlri elrgankftl ynqnkelvge yhyndiiksh
      181 klgnfiiekv fisdnkkkik hynggtyqid ikdldkeinl vqkry
//
LOCUS       WP_235873801             117 aa            linear   BCT 02-MAR-2025
DEFINITION  O-antigen polysaccharide polymerase Wzy [Flavobacterium
            oreochromis].
ACCESSION   WP_235873801
VERSION     WP_235873801.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 117)
  AUTHORS   Fratamico,P.M., Yan,X., Liu,Y., DebRoy,C., Byrne,B., Monaghan,A.,
            Fanning,S. and Bolton,D.
  TITLE     Escherichia coli serogroup O2 and O28ac O-antigen gene cluster
            sequences and detection of pathogenic E. coli O2 and O28ac by PCR
  JOURNAL   Can J Microbiol 56 (4), 308-316 (2010)
   PUBMED   20453897
REFERENCE   2  (residues 1 to 117)
  AUTHORS   Samuel,G. and Reeves,P.
  TITLE     Biosynthesis of O-antigens: genes and pathways involved in
            nucleotide sugar precursor synthesis and O-antigen assembly
  JOURNAL   Carbohydr Res 338 (23), 2503-2519 (2003)
   PUBMED   14670712
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025654.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14296.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     gene            1..117
                     /gene="wzy"
     Protein         1..117
                     /product="O-antigen polysaccharide polymerase Wzy"
                     /calculated_mol_wt=13088
     Region          <30..108
                     /region_name="DUF4271"
                     /note="Domain of unknown function (DUF4271); cl40682"
                     /db_xref="CDD:454814"
ORIGIN      
        1 mvvaifgfdq dnmrsalitt katfgevgtw glgtnivadv ylafgivgvf flfpilgysv
       61 nyarmnalss irsfisyavi vgfsvylara eyfyflrfll wciiilsitl kiqkrlk
//
LOCUS       WP_235873901             833 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5686 family protein [Flavobacterium oreochromis].
ACCESSION   WP_235873901
VERSION     WP_235873901.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039501.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18939.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..833
                     /product="DUF5686 family protein"
                     /calculated_mol_wt=95790
     Region          23..105
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
     Region          206..791
                     /region_name="DUF5686"
                     /note="Family of unknown function (DUF5686); pfam18939"
                     /db_xref="CDD:465922"
ORIGIN      
        1 mqkkisffii lfftlfinaq tkvsgtiydd qnlplpfani yfkgsktgis sdvngvfkie
       61 stndykaiiv kytgfedtev elntsiinnl kvvmsttkql kevvvvakpk khlkkeenpa
      121 ykilqqiwkn kkkngllask syqytkytsi anglsnldsv flkrvlgnhy dsvikiaeqk
      181 knqpnyiipt ylretnekiy gdnirnkfke vtegerttgl adkgfmmeki gnfikpfdvy
      241 dddvvilnka fvsplsvrgy sqyeyvlkds iqdgnkkiye ifyfprnnqd llfqgsfkvs
      301 dknfaitemy lrnnpkvnln fvrnlsieki ytiqdndvyl peretyegdf tffskedgek
      361 gmylkknily sdyifnqela pnfydtievq tlanqfekgd dywkqlttre aginntrkii
      421 tdlgnnkrir rvtnlitilt sgyftvfkni qygslyqtfs nnnvegirlk agfrtftnpn
      481 dlfrvngyma ygtldhaikf glstrylint npritlglgf lkdnlqlssi gleeseliat
      541 gpstnviiar genysltnve ksvfstdyqp hnnlkfnlsf vhrdmksasn drfsiaydyn
      601 geikntltdf avscgifytp krdvygfgvd qtytgrlyss lalkythglk gvfngqynyd
      661 kiqllyekpl qlsnfgvlrt tlegakvfqk lplnlltpiv vnqaysispn sfslldyydl
      721 vtdqyfsirf ehhfngyifn ripllkklkl revlfyktiw gsisqsnksi nhssinynap
      781 tngyseygfg ieniglgnfk piridfiwrs afndinggip ptfgvrfgff pef
//
LOCUS       WP_235873988             155 aa            linear   BCT 02-MAR-2025
DEFINITION  lipoprotein [Flavobacterium oreochromis].
ACCESSION   WP_235873988
VERSION     WP_235873988.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 155)
  AUTHORS   Denham,E.L., Ward,P.N. and Leigh,J.A.
  TITLE     Lipoprotein signal peptides are processed by Lsp and Eep of
            Streptococcus uberis
  JOURNAL   J Bacteriol 190 (13), 4641-4647 (2008)
   PUBMED   18469106
REFERENCE   2  (residues 1 to 155)
  AUTHORS   Hayashi,S. and Wu,H.C.
  TITLE     Lipoproteins in bacteria
  JOURNAL   J Bioenerg Biomembr 22 (3), 451-471 (1990)
   PUBMED   2202727
REFERENCE   3  (residues 1 to 155)
  AUTHORS   von Heijne,G.
  TITLE     The structure of signal peptides from bacterial lipoproteins
  JOURNAL   Protein Eng 2 (7), 531-534 (1989)
   PUBMED   2664762
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019749.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08139.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..155
                     /product="lipoprotein"
                     /calculated_mol_wt=17100
     Region          43..>99
                     /region_name="mltC"
                     /note="membrane-bound lytic murein transglycosylase MltC;
                     PRK11671"
                     /db_xref="CDD:183271"
ORIGIN      
        1 mvvvevvvav aaaaavvvgn illeiikakv qqsisktnkr lnmkkitlii tialvltscn
       61 fetkkaklke eniekqeans stngfdllnl kfnetitdil ksvklnlkdn qdtdamtsfe
      121 ykkfettsns llilgkekla qvskntiihy netnn
//
LOCUS       WP_235874067             578 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein [Flavobacterium oreochromis].
ACCESSION   WP_235874067
VERSION     WP_235874067.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..578
                     /product="DUF6531 domain-containing protein"
                     /calculated_mol_wt=66114
     Region          214..287
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
     Region          <332..>577
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
ORIGIN      
        1 mllasnhltl vlgvdihfti mgnpfhpyig ividpfdyip higstvhvnk ikransttqg
       61 viiplfhfal fgglfvkavp papirmgesm nffgsqnvyt egarftpkgf fvmtcndigv
      121 plslapgksw kslvpslfmp lagslpisfg apvnvgppyv pdfkamimnl atsmgfgyll
      181 kyggkivqkg isklnnkflk pgklknflck ygfepinlvn gsiiyegtdf eipspqpikw
      241 erqwysdsey ngwlgygvhc nydrcieidy dleiiglrme dgrivtfpfl dqgedfylrq
      301 ekikltrfkn hyqafdyttf ttyifdsyng ydqyrltqii dkagfttkly lssdqlimie
      361 dcagrkikvy nndqgliikl tliqdntedi lvsysydqdq nmiritdalq ksthikyegh
      421 lmvektdrng qsfyweydgk ktgakcvhtw gddgwqegwi qyfpekgynl vkdangaitt
      481 yyyepnqlvt qitdplgnnh fteyteymei yreidpegym tgytyddfgn ktsvvypdts
      541 ttlylydkeq rlsiivdpeg nqttytykkt kniystvl
//
LOCUS       WP_235874107             544 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein [Flavobacterium oreochromis].
ACCESSION   WP_235874107
VERSION     WP_235874107.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024554.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13155.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..544
                     /product="toprim domain-containing protein"
                     /calculated_mol_wt=62124
     Region          83..177
                     /region_name="Toprim_2"
                     /note="Toprim-like; pfam13155"
                     /db_xref="CDD:463793"
ORIGIN      
        1 miqdaleigm ltplnrvnnq tgeavtyqvf gvksiafplr nakgqivsyy frnvedkngk
       61 hfylknrqgl ypyypkpetk klilteaiid casllhipei tnnysllacy gtngltpeht
      121 eavsqlkele eiifffdgdk agstaiekyt kelqtlnvkl kitkveppen edvnsllvay
      181 ekeifmelle krktvitkdk tilpeniiss veptlnfkpl nfesktkpld llktpnllhn
      241 indllgkigi vgeednrllq yvtattykmn ynlhvlyqgs sgsgkthtik qiallipped
      301 viyltrvtes slynykngef myklvvfedl dglkeealla vremisnkkl ssstsikdkk
      361 gnadgkikav evsfaslsat tkgelyednm sriivlsvde skeqtkriie yknkvyqgei
      421 nkeeqekirq flrecikllq vyevinpyan lvelpenvhk ptrmhdivmg vinqivllnq
      481 yqrnktpqgq liaekedvin glllmknsii lkmdelegkv rtfyeslkkf aekkakkkir
      541 kkkm
//
LOCUS       WP_235874131             681 aa            linear   BCT 02-MAR-2025
DEFINITION  LysM peptidoglycan-binding domain-containing protein
            [Flavobacterium oreochromis].
ACCESSION   WP_235874131
VERSION     WP_235874131.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 681)
  AUTHORS   Bateman,A. and Bycroft,M.
  TITLE     The structure of a LysM domain from E. coli membrane-bound lytic
            murein transglycosylase D (MltD)
  JOURNAL   J Mol Biol 299 (4), 1113-1119 (2000)
   PUBMED   10843862
REFERENCE   2  (residues 1 to 681)
  AUTHORS   Joris,B., Englebert,S., Chu,C.P., Kariyama,R., Daneo-Moore,L.,
            Shockman,G.D. and Ghuysen,J.M.
  TITLE     Modular design of the Enterococcus hirae muramidase-2 and
            Streptococcus faecalis autolysin
  JOURNAL   FEMS Microbiol Lett 70 (3), 257-264 (1992)
   PUBMED   1352512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01476.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..681
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=78245
     Region          150..278
                     /region_name="MltD-like"
                     /note="Membrane-bound lytic murein transglycosylase D and
                     similar proteins; cd16894"
                     /db_xref="CDD:381615"
     Region          <154..562
                     /region_name="mltD"
                     /note="membrane-bound lytic murein transglycosylase D;
                     Provisional; PRK10783"
                     /db_xref="CDD:182727"
     Site            order(166,184..186,189,217,235..236)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:381615"
     Region          <416..681
                     /region_name="PRK06347"
                     /note="1,4-beta-N-acetylmuramoylhydrolase"
                     /db_xref="CDD:180536"
ORIGIN      
        1 mirkklalnl fllvsafgty aqdkipqdsv lkpivkrsyl dsikstfvvn etldcidnqy
       61 ikelsntqdi fdgivsdikn ldlnakvdfd lptdvfkerl rlldekspfn ieynpqlenl
      121 vknflknrkr syerlmglsq fyfplfeeam arydvpleik ylsivesalr ssavsrvgat
      181 glwqfmyetg kqyglkidsy iderkdtfka tdaaarymqs mfkifgdwel vlasynsgag
      241 nvskairrsg gfqnfwnikh klpretqsyv paflatmyif eyhkehglvp ykpvakhfet
      301 dtialkrkis fkqlaslldm pesdieflnp sykmkvipyv tgktnfvclp kkklailasn
      361 eekvyayvdh ieskrekpfi rqikpriike iletekvvee slvsnkietk kpllqklhvv
      421 rkgedanvla qkynvavadi krwnrlrgih llrgskirik ydetntiaan tvqepeernq
      481 vvlntpsnts klktldlvvq keskvkneln ssnndtaise hivlqgetly giakkyhlyv
      541 sdlkkwnqve sglvtpgdvi klvepkqevl vqidlytvkk gdnfgkiaka ygvtvdellq
      601 wndrtskdik igeqlkieks iaakvelpkk klpfeeqkly vvqkgdslfk iskkynttva
      661 elrkknnike ndlqpgmkik i
//
LOCUS       WP_235874149              94 aa            linear   BCT 02-MAR-2025
DEFINITION  LysM peptidoglycan-binding domain-containing protein
            [Flavobacterium oreochromis].
ACCESSION   WP_235874149
VERSION     WP_235874149.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 94)
  AUTHORS   Bateman,A. and Bycroft,M.
  TITLE     The structure of a LysM domain from E. coli membrane-bound lytic
            murein transglycosylase D (MltD)
  JOURNAL   J Mol Biol 299 (4), 1113-1119 (2000)
   PUBMED   10843862
REFERENCE   2  (residues 1 to 94)
  AUTHORS   Joris,B., Englebert,S., Chu,C.P., Kariyama,R., Daneo-Moore,L.,
            Shockman,G.D. and Ghuysen,J.M.
  TITLE     Modular design of the Enterococcus hirae muramidase-2 and
            Streptococcus faecalis autolysin
  JOURNAL   FEMS Microbiol Lett 70 (3), 257-264 (1992)
   PUBMED   1352512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01476.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..94
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=11142
     Region          <8..35
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
ORIGIN      
        1 mnnnwsrykv kkgdtlesia keigishqal rrhhntyckk kylieynhlk gieeillpsi
       61 eelekllefe kkqsllviyl citylkiftk nnmm
//
LOCUS       WP_235874191             936 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxypeptidase-like regulatory domain-containing protein
            [Flavobacterium oreochromis].
ACCESSION   WP_235874191
VERSION     WP_235874191.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 936)
  AUTHORS   Cho,K.H. and Salyers,A.A.
  TITLE     Biochemical analysis of interactions between outer membrane
            proteins that contribute to starch utilization by Bacteroides
            thetaiotaomicron
  JOURNAL   J Bacteriol 183 (24), 7224-7230 (2001)
   PUBMED   11717282
REFERENCE   2  (residues 1 to 936)
  AUTHORS   Shipman,J.A., Berleman,J.E. and Salyers,A.A.
  TITLE     Characterization of four outer membrane proteins involved in
            binding starch to the cell surface of Bacteroides thetaiotaomicron
  JOURNAL   J Bacteriol 182 (19), 5365-5372 (2000)
   PUBMED   10986238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025092.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13715.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..936
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /calculated_mol_wt=105171
     Region          25..110
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
     Region          145..887
                     /region_name="CirA"
                     /note="Outer membrane receptor protein, Fe transport
                     [Inorganic ion transport and metabolism]; COG1629"
                     /db_xref="CDD:441236"
ORIGIN      
        1 mkklvfstll vlqavlvfaq qptgisgkvi dyktnkplqn vvttientsl sqltnssgkf
       61 kitgvsvgkq llkiksdgyk eqllaleiis nqildlgviv leddsqnqeq qlslvtlten
      121 dlgddnsgse stsgllqatr dtyqqaaafn wggarfrirg ldneygntmi ngvsmnkiwd
      181 grpqwgnwgg lndatrnqef tmgtaasdyt fgnilgtqqi ntrasmyrag trisfsgtnt
      241 nynwrgmgty asgldskgws fvvsasrrwa qeghfegtdm aanslfasve krfgkkhaln
      301 ftsiyaenrr gktspntsev tdikgykyns ywgwqegkkr nsrdrminep immlnhywkf
      361 sertklntnl afqsgsvans rleypggnnp dptyykklps nylnltnest gewipdyaka
      421 aialtdfrnn gqinwdemyy antnpnnitg kayyllteqr nddtqitant ilnsqvseni
      481 sinagvnfkk lkshqyavvs dllgakyten fdpfyeskgd faqydlnnpn qkiqlndifg
      541 ynynlratvi daftqfkfnf kkadfylsqs fskseyqreg lykngkyasn sfgkserptf
      601 enfglkagit yklssrhlfd fngayltkap nlrntfanar ynnnltldlt sekivsadas
      661 yiirtpkfks ritgfynkvs gatniafffs egiadedtnn gnedafvsei vtgidrknig
      721 gelgieyqis stikatlags ygeytydnnp tlrvnndaaa tvsntypved fgktylkgyr
      781 vagmpqvags fgleyrhpkf wyiganynyf dqtyvgvsni lrtnnftidd ktgisydgvn
      841 etsvrnalqq erlpayflln lsggkswrik rgvtfgffat vnnaldkvfk tggfeqarka
      901 tfpllnqdsq sgirtfgsky fygygrnffv nlyinf
//
LOCUS       WP_235874264             400 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Flavobacterium oreochromis].
ACCESSION   WP_235874264
VERSION     WP_235874264.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..400
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45257
     Region          15..391
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(25..26,29,32,65,115..116,118..120,123,143,146..147,
                     150,222,225..226,229..231,234,262,266,317..318,322,326,
                     342,345..346,349..350,353)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mefikrskih fnleikvial itlinrmgav vvpflskyln etlgftysqi gwimvcfgig
       61 slvgtfasgr lsdiigsykv mifslftsgi iffvlkhvks feaicvivfl lttiadmyrp
      121 ammltvnnyv skemklqsls lirsasnlgl vfgpviggli isywnydvlf wvdgvtclla
      181 isifallvke rkvpfdlnlt kinldklapi kdipfilnwv iamitgylff qvftilplfq
      241 knafhikdvt tgmlfgfsgl lfilfevrli nkmqikrvne tlaiaigltl fslgyfslyc
      301 ihkswvlwlf mafmtfgnml tfsyasglvl krshknhegi fmsafqmsyg fahvlssktg
      361 lsivqdigyq anwlinsiis llgvgltyym ylilkrnkfl
//
LOCUS       WP_235874312             208 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor plug domain-containing protein
            [Flavobacterium oreochromis].
ACCESSION   WP_235874312
VERSION     WP_235874312.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 208)
  AUTHORS   Oke,M., Sarra,R., Ghirlando,R., Farnaud,S., Gorringe,A.R.,
            Evans,R.W. and Buchanan,S.K.
  TITLE     The plug domain of a neisserial TonB-dependent transporter retains
            structural integrity in the absence of its transmembrane
            beta-barrel
  JOURNAL   FEBS Lett 564 (3), 294-300 (2004)
   PUBMED   15111112
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07715.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..208
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /calculated_mol_wt=22060
     Region          33..>208
                     /region_name="CirA"
                     /note="Outer membrane receptor protein, Fe transport
                     [Inorganic ion transport and metabolism]; COG1629"
                     /db_xref="CDD:441236"
ORIGIN      
        1 mkitnkvgva llalssiqai sqehkkntev nklnevevta tsqsdktllk qaasiskles
       61 keiqrgtglf fddavntnip gmfmqrrtvs agqtfnirgy gngvrgtngt nsnfdsqgvk
      121 vylnnipvtd aegitlmddi dfnsigevev lkgpagslyg laiagavnlk tikpeagkis
      181 lsqntlfgsy glrrltsqia vgsekasf
//
LOCUS       WP_235874393             419 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-propeller fold lactonase family protein [Flavobacterium
            oreochromis].
ACCESSION   WP_235874393
VERSION     WP_235874393.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 419)
  AUTHORS   Kajander,T., Merckel,M.C., Thompson,A., Deacon,A.M., Mazur,P.,
            Kozarich,J.W. and Goldman,A.
  TITLE     The structure of Neurospora crassa 3-carboxy-cis,cis-muconate
            lactonizing enzyme, a beta propeller cycloisomerase
  JOURNAL   Structure 10 (4), 483-492 (2002)
   PUBMED   11937053
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021778.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10282.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..419
                     /product="beta-propeller fold lactonase family protein"
                     /calculated_mol_wt=47287
     Region          3..335
                     /region_name="Pgl"
                     /note="6-phosphogluconolactonase, cycloisomerase 2 family
                     [Carbohydrate transport and metabolism]; COG2706"
                     /db_xref="CDD:442025"
ORIGIN      
        1 mvgyvytstn gendnqiiql arfsdgtlek ekvyptggkg gsnssapvng dydsqgaiqi
       61 idnylltint gdntvsvfnl drktgnlkkn divtshgqkp vsitytkskt esdtywvvva
      121 nqwgiptaly dgdkyielpn kdffkqnlks kdfsdkdrni slykfntktg kltfnkllds
      181 ykrywggpvq vifshsgnql alttwgiphf ltedpnpkfv kpsqvivydf nngqtsnkri
      241 feeegligav gfnwskkdnl lyvtyfnpik tkdnqglvvl eitpskinkv ngyetgassd
      301 ideacwsavs pdykyfyavs fgtnvitpyk ldengniiki lpyttvknkd hypdlkdmyi
      361 shnnkyaycl gsfqtftiky fsihnkglqh tgeykvkytk syqgktgkfn fqgfvgydi
//
LOCUS       WP_235874251             341 aa            linear   BCT 02-MAR-2025
DEFINITION  RNA ligase [Flavobacterium oreochromis].
ACCESSION   WP_235874251
VERSION     WP_235874251.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 341)
  AUTHORS   Sawaya,R., Schwer,B. and Shuman,S.
  TITLE     Genetic and biochemical analysis of the functional domains of yeast
            tRNA ligase
  JOURNAL   J Biol Chem 278 (45), 43928-43938 (2003)
   PUBMED   12933796
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021059.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09511.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..341
                     /product="RNA ligase"
                     /calculated_mol_wt=40150
     Region          <4..224
                     /region_name="Trl1"
                     /note="tRNA splicing ligase [Translation, ribosomal
                     structure and biogenesis]; COG5324"
                     /db_xref="CDD:444116"
ORIGIN      
        1 mdlqllqqmi aqdyikvnkh pnaelyiyny tqftqfdriw nevtlacrgl ilddeqkiia
       61 rpfpkffnlg epeakelpas sfqvfdkldg slgilywled kpfiasrgsf sseqsdkane
      121 llykkygdvi pylnpsntyl feiiypenrv vvdygneekl vligiietkt gielplvdig
      181 fplvkeynhf skieeltqqq wdnhegfvir fengfrvkvk feeyvrlhri ltqfstvdiw
      241 ecvsgesslq vllenvpdef fewvkkvesd lkkqfqaiee dcknyykvle trketafyfl
      301 ahphkdvlfn mlnekdytkt iwrkikpkfe kpfgtcqvsk t
//
LOCUS       WP_235874262             336 aa            linear   BCT 02-MAR-2025
DEFINITION  RNA ligase family protein [Flavobacterium oreochromis].
ACCESSION   WP_235874262
VERSION     WP_235874262.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 336)
  AUTHORS   Nandakumar,J., Shuman,S. and Lima,C.D.
  TITLE     RNA ligase structures reveal the basis for RNA specificity and
            conformational changes that drive ligation forward
  JOURNAL   Cell 127 (1), 71-84 (2006)
   PUBMED   17018278
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020968.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09414.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..336
                     /product="RNA ligase family protein"
                     /calculated_mol_wt=39307
     Region          3..310
                     /region_name="Adenylation_DNA_ligase_like"
                     /note="Adenylation domain of proteins similar to
                     ATP-dependent polynucleotide ligases; cl12015"
                     /db_xref="CDD:448381"
ORIGIN      
        1 mefrkynsie ntyqktvleq iikhefdtvd yvvqekvhga nfafytngiq vkitkrsdfi
       61 eendtfynah kvaekyhtkv kslffeikel fpntqfitvf gelfgghynh pevptvqgai
      121 kvqkgidysp endfyafdik vdnshymnve lanklfekig ffyaktlfkg sltdclkypn
      181 dftslipewl glptlesniv egviirpvdt lffgngsrvl lknknekwse rgknekpkke
      241 hqmvdfppev qsiwskitdy vtvnriynvl skegefhpki fgkltgwmsq dvmtdfqkdh
      301 ptewdsleke hqktinkrln tlivkeikee fmtfkv
//
LOCUS       WP_235874028             594 aa            linear   BCT 02-MAR-2025
DEFINITION  thrombospondin type 3 repeat-containing protein [Flavobacterium
            oreochromis].
ACCESSION   WP_235874028
VERSION     WP_235874028.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 594)
  AUTHORS   Kvansakul,M., Adams,J.C. and Hohenester,E.
  TITLE     Structure of a thrombospondin C-terminal fragment reveals a novel
            calcium core in the type 3 repeats
  JOURNAL   EMBO J 23 (6), 1223-1233 (2004)
   PUBMED   15014436
REFERENCE   2  (residues 1 to 594)
  AUTHORS   Lawler,J. and Hynes,R.O.
  TITLE     The structure of human thrombospondin, an adhesive glycoprotein
            with multiple calcium-binding sites and homologies with several
            different proteins
  JOURNAL   J Cell Biol 103 (5), 1635-1648 (1986)
   PUBMED   2430973
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014466.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02412.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..594
                     /product="thrombospondin type 3 repeat-containing protein"
                     /GO_function="GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0007155 - cell adhesion [Evidence IEA]"
                     /calculated_mol_wt=65462
     Region          100..145
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          100..145
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275366"
     Region          146..168
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275366"
     Region          <210..352
                     /region_name="RhsA"
                     /note="Uncharacterized conserved protein RhaS, contains 28
                     RHS repeats [General function prediction only]; COG3209"
                     /db_xref="CDD:442442"
ORIGIN      
        1 mgywdnsnll eikrdalpad icdityavnk nycgakdtsc eqiftfdgqm dlfsnnklkl
       61 tgnvqpsadg ycgpgpkdsd gdavldandn cpytfnpdqk dsdedgvgdv cdnclkqknt
      121 dqkdtdndgv gdtcdncisk pnfdqtdsdk dgigdvcdnc aktankdqkd tngngigdvc
      181 egydqgagpl pelgnrndyf rkvgdknyel snhlgnvlev itdrklattd snspftftpd
      241 vtsyndyypf gslvpnrhgs skpngyrygf qgqerddelk gegnslnytf rmhdprvgrf
      301 favdplesry pwnspyafse ndvissvele glekwkivdn kvvyagpaik gydseeaaka
      361 vlvrrqlvqn syqgpvftqd nrtysqraah eravrtqmss dafnnqvyet pslmlaqgvl
      421 iglqeapavi sgeiivdkva kslkaikair hskmaasass kienaayhgm eflddfarik
      481 ppinlntaei snidnlvnsa erivtgkttr gvqalakkig rgdeaykglk atqkqanaii
      541 ddvmsskdki vvptrnqqgi evidyynpnt kqgvrmiqet gefdtfinyn pkks
//
LOCUS       WP_235874411             125 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease subunit S [Streptococcus pneumoniae].
ACCESSION   WP_235874411
VERSION     WP_235874411.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 125)
  AUTHORS   Janscak,P. and Bickle,T.A.
  TITLE     The DNA recognition subunit of the type IB restriction-modification
            enzyme EcoAI tolerates circular permutions of its polypeptide chain
  JOURNAL   J Mol Biol 284 (4), 937-948 (1998)
   PUBMED   9837717
REFERENCE   2  (residues 1 to 125)
  AUTHORS   Bickle,T.A. and Kruger,D.H.
  TITLE     Biology of DNA restriction
  JOURNAL   Microbiol Rev 57 (2), 434-450 (1993)
   PUBMED   8336674
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01420.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         1..125
                     /product="restriction endonuclease subunit S"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=13939
     Region          <13..123
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
ORIGIN      
        1 mksqkhgdil nlkskkidis pkgtllmsfk lsigkvaild ipathneaii sifpyanken
       61 iirdylmifl plistlgdsk daikgktlns tsisellipi snheemkrii fkvdllfqkv
      121 sqlfe
//
LOCUS       WP_235874518              75 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Secundilactobacillus hailunensis].
ACCESSION   WP_235874518
VERSION     WP_235874518.1
KEYWORDS    RefSeq.
SOURCE      Secundilactobacillus hailunensis
  ORGANISM  Secundilactobacillus hailunensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Secundilactobacillus.
REFERENCE   1  (residues 1 to 75)
  AUTHORS   Ronning,D.R., Guynet,C., Ton-Hoang,B., Perez,Z.N., Ghirlando,R.,
            Chandler,M. and Dyda,F.
  TITLE     Active site sharing and subterminal hairpin recognition in a new
            class of DNA transposases
  JOURNAL   Mol Cell 20 (1), 143-154 (2005)
   PUBMED   16209952
REFERENCE   2  (residues 1 to 75)
  AUTHORS   Brynestad,S., Synstad,B. and Granum,P.E.
  TITLE     The Clostridium perfringens enterotoxin gene is on a transposable
            element in type A human food poisoning strains
  JOURNAL   Microbiology (Reading) 143 (Pt 7), 2109-2115 (1997)
   PUBMED   9245800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013921.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01797.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Secundilactobacillus hailunensis"
                     /db_xref="taxon:2559923"
     Protein         1..75
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=8500
     Region          <1..62
                     /region_name="Y1_Tnp"
                     /note="Transposase IS200 like; cl00848"
                     /db_xref="CDD:469954"
ORIGIN      
        1 mvtsfppksa pssivkafkg glwfiqfpqt qkslwgrhlw slsffmstfg ntsketivqy
       61 vdsqldryng grprr
//
LOCUS       WP_235874146             318 aa            linear   BCT 02-MAR-2025
DEFINITION  CZB domain-containing protein [Flavobacterium oreochromis].
ACCESSION   WP_235874146
VERSION     WP_235874146.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 318)
  AUTHORS   Zahringer,F., Lacanna,E., Jenal,U., Schirmer,T. and Boehm,A.
  TITLE     Structure and signaling mechanism of a zinc-sensory diguanylate
            cyclase
  JOURNAL   Structure 21 (7), 1149-1157 (2013)
   PUBMED   23769666
REFERENCE   2  (residues 1 to 318)
  AUTHORS   Draper,J., Karplus,K. and Ottemann,K.M.
  TITLE     Identification of a chemoreceptor zinc-binding domain common to
            cytoplasmic bacterial chemoreceptors
  JOURNAL   J Bacteriol 193 (17), 4338-4345 (2011)
   PUBMED   21725005
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025062.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13682.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..318
                     /product="CZB domain-containing protein"
                     /calculated_mol_wt=36407
     Region          14..80
                     /region_name="CZB"
                     /note="Chemoreceptor zinc-binding domain; pfam13682"
                     /db_xref="CDD:433401"
     Region          142..226
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cd00130"
                     /db_xref="CDD:238075"
     Site            order(158,162,168,181..184,210,215)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(178,182,190,193..194,222,224)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
ORIGIN      
        1 memkisfeqg rldhlgwmhk mrdlldgkve laeseivshl qcrlgkwyes egrdefgele
       61 elqkfdvkhi klhklakeiy lenklgnkai aeelfidlss tseeivtlln eaenklnigv
      121 tkvvereipi kllddaapwd ksntlvikil pnseieyvna fftevssfen kdlmgksfns
      181 ilhpdipksi eklilednka aerntkilkf vtyngkfvwa iadfiptivd dkttditvkl
      241 sgvnnailak fiiplyeeir iieakkgesg gilflnnfle ernrtmdeyi qnliitgrds
      301 iksaekrtwl gklfnfsl
//
LOCUS       WP_235874531             106 aa            linear   BCT 02-MAR-2025
DEFINITION  immunoglobulin-like domain-containing protein, partial [Pseudomonas
            inefficax].
ACCESSION   WP_235874531
VERSION     WP_235874531.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas inefficax
  ORGANISM  Pseudomonas inefficax
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042607.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20579.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Pseudomonas inefficax"
                     /db_xref="taxon:2078786"
     Protein         1..>106
                     /product="immunoglobulin-like domain-containing protein"
     Region          49..>106
                     /region_name="LapA"
                     /note="LapA domain; pfam20579"
                     /db_xref="CDD:466728"
ORIGIN      
        1 mrltapnnvh ntnldlsnki tsisggnyek tvavgepvtt vtdnpatpdi ttlsltatdt
       61 vaeggkityt atlsnkagtd lviklsnges itiaagqkea sitida
//
LOCUS       WP_235874537              88 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Pseudomonas inefficax].
ACCESSION   WP_235874537
VERSION     WP_235874537.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas inefficax
  ORGANISM  Pseudomonas inefficax
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 88)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Pseudomonas inefficax"
                     /db_xref="taxon:2078786"
     Protein         1..>88
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>88
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 makekfdrsl phvnvgtigh vdhgkttlta altrvcsevf gsavvefdki dsapeekarg
       61 itintahvey nsnirhyahv dcpghady
//
LOCUS       WP_235874562             618 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: tyrosine-type recombinase/integrase [Pseudomonas].
ACCESSION   WP_235874562
VERSION     WP_235874562.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
REFERENCE   1  (residues 1 to 618)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 618)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..618
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=70793
     Region          273..455
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(275,288..289,358,360,417,453)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:271187"
     Site            order(288,417,420,444,453)
                     /site_type="active"
                     /db_xref="CDD:271187"
ORIGIN      
        1 mlffesfadq padikglies erdrliittm qldgnwtvts rygddtwefs dfttnaphss
       61 kkinfmkfpp afrsvmkamv yrlimrgrng cvrpkgptvr lfflnaglfl rylqslsies
      121 lgkispmica nyaksckdrr hhqtgkplsv arliallisv eeiyelsqyt ndpmpqhpwp
      181 essarclagg igmdfksktp lipddvfcsl fkqasleien akqildlrde lyafednqvd
      241 cipsseclak nrhlksrgwe lglrefyksl islrtacyiv lastsgcrnh eltnlqigsh
      301 hrsednegni yhwmrsksek tdegmhswmi peaavralrv merwsdpyra aiadeiahlr
      361 rynphdpnig evlkhrnalf lglnkfgkvr tvtrsnwpka lnnftkncgl nwklathqfr
      421 rkfanyaahs rfgdlrylre hfahwsldmt lryamddswg qhldldlyle iqgeledikf
      481 etvdswmesk slaggygtai kkwqrnpqnl lifpnhaaml ksiaestsir snghawctad
      541 ndrcvgntle rtrcgagcnq avigpshapi yqrlykdlke lrdcadigea grqrvdrdld
      601 rsrevlrqlg idpeeiia
//
LOCUS       WP_235874575             114 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Pseudomonas inefficax].
ACCESSION   WP_235874575
VERSION     WP_235874575.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas inefficax
  ORGANISM  Pseudomonas inefficax
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 114)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Pseudomonas inefficax"
                     /db_xref="taxon:2078786"
     Protein         <1..114
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <5..92
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 yegdwvfpqg vdqcvitpnd sfstnvadam lvaselgmgi gllpfytasq aieqgrlcrl
       61 lapyrlresa lyaiypsrhy ldakvrtwid ylkeqlpalf egharvvdds rywr
//
LOCUS       WP_235874615             197 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: tail fiber assembly protein [Pseudomonas].
ACCESSION   WP_235874615
VERSION     WP_235874615.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
REFERENCE   1  (residues 1 to 197)
  AUTHORS   Pell,L.G., Kanelis,V., Donaldson,L.W., Howell,P.L. and
            Davidson,A.R.
  TITLE     The phage lambda major tail protein structure reveals a common
            evolution for long-tailed phages and the type VI bacterial
            secretion system
  JOURNAL   Proc Natl Acad Sci U S A 106 (11), 4160-4165 (2009)
   PUBMED   19251647
REFERENCE   2  (residues 1 to 197)
  AUTHORS   Wang,J., Hofnung,M. and Charbit,A.
  TITLE     The C-terminal portion of the tail fiber protein of bacteriophage
            lambda is responsible for binding to LamB, its receptor at the
            surface of Escherichia coli K-12
  JOURNAL   J Bacteriol 182 (2), 508-512 (2000)
   PUBMED   10629200
REFERENCE   3  (residues 1 to 197)
  AUTHORS   Haggard-Ljungquist,E., Halling,C. and Calendar,R.
  TITLE     DNA sequences of the tail fiber genes of bacteriophage P2: evidence
            for horizontal transfer of tail fiber genes among unrelated
            bacteriophages
  JOURNAL   J Bacteriol 174 (5), 1462-1477 (1992)
   PUBMED   1531648
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014467.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02413.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..197
                     /product="tail fiber assembly protein"
                     /calculated_mol_wt=20821
     Region          <134..197
                     /region_name="Caudo_TAP"
                     /note="Caudovirales tail fibre assembly protein, lambda
                     gpK; cl17077"
                     /db_xref="CDD:450149"
ORIGIN      
        1 milklspvrs dihlsvaktg dilevngval dfsrladgat lpaeavgcnf viapvering
       61 dlvltlmlph dadapqgarf pvdlypadgq vqlpglelgd rlsatagvid wsqvitaeak
      121 aqaaaeqlla tvvseqaqrr avadaaiapl qdaveldeat eaeaallidw kryrvalsrl
      181 pdqegypndi dwptppa
//
LOCUS       WP_235874619             179 aa            linear   BCT 02-MAR-2025
DEFINITION  isocitrate/isopropylmalate family dehydrogenase, partial
            [Pseudomonas inefficax].
ACCESSION   WP_235874619
VERSION     WP_235874619.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas inefficax
  ORGANISM  Pseudomonas inefficax
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012407.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00180.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Pseudomonas inefficax"
                     /db_xref="taxon:2078786"
     Protein         <1..179
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /GO_function="GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
     Region          <1..179
                     /region_name="Iso_dh"
                     /note="Isocitrate/isopropylmalate dehydrogenase; cl00445"
                     /db_xref="CDD:444908"
ORIGIN      
        1 egafkdwgye vardefgael ldggpwmkfk npksgreviv kdaiadamlq qillrpaeyd
       61 viatlnlngd ylsdalaaev ggigiapgan lsdtvamfea thgtapkyag qdkvnpgsvi
      121 lsaemmlrhm gwteaadlii kgtngaiaak tvtydferlm dgarlvgssg fgdemikhm
//
LOCUS       WP_235874628             217 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6708 domain-containing protein [Pseudomonas].
ACCESSION   WP_235874628
VERSION     WP_235874628.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042867.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20455.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..217
                     /product="DUF6708 domain-containing protein"
                     /calculated_mol_wt=24900
     Region          54..217
                     /region_name="DUF6708"
                     /note="Family of unknown function (DUF6708); pfam20455"
                     /db_xref="CDD:466604"
ORIGIN      
        1 mtyleiprqs vssrgmisaf afllciffaf slymmtltld prnfesllls iseiflvtwl
       61 vtiglrmdis pprdepirfn rtrqkiyayn fkrqwwnpfd kgkvvpvsyd wsqvraerws
      121 qtgalpnggl ifkwgvmlsi vapgtnnvid rfhlstmgad qhawayicty mqegpsalpp
      181 pgepkdhndv lwcefalrla prvewpaemd lesrtap
//
LOCUS       WP_235874670             419 aa            linear   BCT 02-MAR-2025
DEFINITION  benzoate/H(+) symporter BenE family transporter [Saccharopolyspora
            aridisoli].
ACCESSION   WP_235874670
VERSION     WP_235874670.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora aridisoli
  ORGANISM  Saccharopolyspora aridisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015551.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03594.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Saccharopolyspora aridisoli"
                     /db_xref="taxon:2530385"
     Protein         1..419
                     /product="benzoate/H(+) symporter BenE family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0042925 - benzoate transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0042919 - benzoate transport [Evidence
                     IEA]"
                     /calculated_mol_wt=42940
     Region          27..413
                     /region_name="Xan_ur_permease"
                     /note="Permease family; cl23746"
                     /db_xref="CDD:474042"
ORIGIN      
        1 mtstlddvdt ekpvhqerfe rptpagprqv lrdlsgasva ggvvglvfsa tgpiavilsa
       61 gthgglssaq laswvfgvff lngiltaias wvyrqplaff wtipgtvvvg aslnhlswpe
      121 vlgafvvtal lilaigltgw vrtimaalpm pivmamvagv flrfgldlvt atgsdvsval
      181 pmiavfalls aipragrlvp pilgalaaga lavgasgrfa ldstgwlaqp mlqtpefswr
      241 aitelvvpla itvlvvqngq gtavlkqagh npptnvaavl cglwslpaaa vgavstcltg
      301 ptnallvast ersrqytagi vcglgaivvg mfapafvssm latppafiav lgglamlral
      361 qgafvtafst nftlgallaf lvtvsgvspl ninsafwgll agvlvalale rqdftprnp
//
LOCUS       WP_235874694             327 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase [Saccharopolyspora aridisoli].
ACCESSION   WP_235874694
VERSION     WP_235874694.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora aridisoli
  ORGANISM  Saccharopolyspora aridisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 327)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 327)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Saccharopolyspora aridisoli"
                     /db_xref="taxon:2530385"
     Protein         1..327
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=35532
     Region          6..303
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     Site            order(23..25,55,60,85,122,152..153,172,200..206,258,
                     275..278,283,286..287)
                     /site_type="active"
                     /db_xref="CDD:381296"
     Site            order(55,60,85,122)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381296"
ORIGIN      
        1 msdtpprrrl grngpevsai gygamglsgv ygtaddaesa kllnemldlg vnfldtadvy
       61 geghneqlis gllaerrdev vlatkfgank etgggkpeyv rqaaeaslsr lgtdhidlyy
      121 lhrldrttpi eetvgamael vaegkighig lseisaatlr rahqvhpita vqqeyslftr
      181 dpeaellpat relgvslvay splgrgvltg sftsasdven levrekrypr fqeeslqrni
      241 eltrplreha drlgitpaql alawllaqge dvlpipgsrr igrvqanvea ahvrlnpela
      301 aelseqfppg taageryhpd gmsrldr
//
LOCUS       WP_235874664             229 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease subunit S, partial [Streptococcus
            pneumoniae].
ACCESSION   WP_235874664
VERSION     WP_235874664.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Janscak,P. and Bickle,T.A.
  TITLE     The DNA recognition subunit of the type IB restriction-modification
            enzyme EcoAI tolerates circular permutions of its polypeptide chain
  JOURNAL   J Mol Biol 284 (4), 937-948 (1998)
   PUBMED   9837717
REFERENCE   2  (residues 1 to 229)
  AUTHORS   Bickle,T.A. and Kruger,D.H.
  TITLE     Biology of DNA restriction
  JOURNAL   Microbiol Rev 57 (2), 434-450 (1993)
   PUBMED   8336674
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01420.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..229
                     /product="restriction endonuclease subunit S"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
     Region          <1..38
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
     Region          47..208
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
ORIGIN      
        1 eqeniiciln tikrlitkrk fqldelnllv ksrfnemfee ypdsvfldty ikelragksl
       61 ageennknkv lktgavsydy fnssevknlp idyipldehk veigdviisr mntselvgaa
      121 gyvwainsdn iylpdrlwkv ilndrvnpvf lwklitnekt klkikrissg tsgsmknisk
      181 sqllqirvpf pplalqnefa dfvalvdksq faceiaikvw rnslkfsii
//
LOCUS       WP_235874714             127 aa            linear   BCT 02-MAR-2025
DEFINITION  SPW repeat domain-containing protein [Saccharopolyspora aridisoli].
ACCESSION   WP_235874714
VERSION     WP_235874714.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora aridisoli
  ORGANISM  Saccharopolyspora aridisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 127)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015720.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03779.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Saccharopolyspora aridisoli"
                     /db_xref="taxon:2530385"
     Protein         1..127
                     /product="SPW repeat domain-containing protein"
                     /calculated_mol_wt=13184
ORIGIN      
        1 maerssasts kpwvrwqdwa gvvlgaylil stmwtstngg amsamivlga llliasvwsl
       61 ampgsmtsey shmllgvllf ispwvlgyae lagaswtswi vgvlavvvga aalpqanaah
      121 rgvagqh
//
LOCUS       WP_235874718             111 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF742 domain-containing protein [Saccharopolyspora aridisoli].
ACCESSION   WP_235874718
VERSION     WP_235874718.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora aridisoli
  ORGANISM  Saccharopolyspora aridisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017170.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05331.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Saccharopolyspora aridisoli"
                     /db_xref="taxon:2530385"
     Protein         1..111
                     /product="DUF742 domain-containing protein"
                     /calculated_mol_wt=11915
     Region          5..111
                     /region_name="HTH_CRP"
                     /note="helix_turn_helix, cAMP Regulatory protein
                     C-terminus; DNA binding domain of prokaryotic regulatory
                     proteins belonging to the catabolite activator protein
                     family; cl46859"
                     /db_xref="CDD:481199"
ORIGIN      
        1 mstsirpyaw tggrtrsnhh leletlvsas gfctpgrlqr tehhaiaeic qhprsiaevg
       61 amlgvplgvv kvllgdmadl glvtvhetvs dnsssshfsl mervlsglrr l
//
LOCUS       WP_235874720             377 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Saccharopolyspora aridisoli].
ACCESSION   WP_235874720
VERSION     WP_235874720.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora aridisoli
  ORGANISM  Saccharopolyspora aridisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Saccharopolyspora aridisoli"
                     /db_xref="taxon:2530385"
     Protein         1..377
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=38461
     Region          21..362
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(28..29,32..33,36,68,118..119,121..123,126,146,
                     149..150,153,216,219..220,223..225,228,250,254,305..306,
                     310,314,327,330..331,334..335,338)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mrtpfstgsr tplgqrsfry lliatvggfs gyalllpvvp lwavaggage iaagatnavf
       61 mlvtvlaqla mpwllrkmdc rglfalgtam iglptplfal ssdmwvllgv salrgigfgv
      121 ltvtgsalta elvplaqrgr aaayyglaig lpnvallptg vwlsgrigfg plfwaagaip
      181 vlaaltilgi ervrirdqer gtqarpvall pswtvmavnt aaaggltafl plavspsvap
      241 pallifaaat mlgrwlaghl gdrfgqqgvl apsvlfggfg vlllalaawt adpvalagaa
      301 vfgtgfgavq nttlilmler adsatastaw niaydgghgl gaigfgvlia asgypvtfai
      361 tgalllacra lagrrwa
//
LOCUS       WP_235874762             276 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Saccharopolyspora aridisoli].
ACCESSION   WP_235874762
VERSION     WP_235874762.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora aridisoli
  ORGANISM  Saccharopolyspora aridisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Saccharopolyspora aridisoli"
                     /db_xref="taxon:2530385"
     Protein         1..276
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=29782
     Region          1..149
                     /region_name="SRPBCC"
                     /note="Ligand-binding SRPBCC domain [General function
                     prediction only]; COG4276"
                     /db_xref="CDD:443417"
     Region          151..272
                     /region_name="NUDIX_MutT_NudA_like"
                     /note="MutT pyrophosphohydrolase; cd03425"
                     /db_xref="CDD:467531"
ORIGIN      
        1 mavlrstgli eapratvgaa lrhtrtaetg ltalgirgrs ltspdsllvp gdelafrlfa
       61 fvlttrivra dadglssvlv agplarlrhe tvlaqvgprt lltdsvrwas pfgplgrlgd
      121 vavgrrlvld vlaarihavr elaeswaark ivvgtaivhe grllaqqrsy pashagqwel
      181 pggrvepged eseavvrecr eelgvevrpt grlgtdvpld ngmllrihta elkdpaqqpt
      241 avehrevrwv saaelpaldw letdrvllht lrellg
//
LOCUS       WP_235874745             701 aa            linear   BCT 02-MAR-2025
DEFINITION  NB-ARC domain-containing protein [Saccharopolyspora aridisoli].
ACCESSION   WP_235874745
VERSION     WP_235874745.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora aridisoli
  ORGANISM  Saccharopolyspora aridisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 701)
  AUTHORS   van der Biezen,E.A. and Jones,J.D.
  TITLE     The NB-ARC domain: a novel signalling motif shared by plant
            resistance gene products and regulators of cell death in animals
  JOURNAL   Curr Biol 8 (7), R226-R227 (1998)
   PUBMED   9545207
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013124.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00931.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Saccharopolyspora aridisoli"
                     /db_xref="taxon:2530385"
     Protein         1..701
                     /product="NB-ARC domain-containing protein"
                     /GO_function="GO:0043531 - ADP binding [Evidence IEA]"
                     /calculated_mol_wt=76021
     Region          80..684
                     /region_name="COG3903"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443109"
     Region          497..525
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          537..565
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(538,541..542,545..546,548,572,575..576,579..580,
                     582..583,606,613..614,617..618,621)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          570..600
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          605..637
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          649..676
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mgtpsggahn saseaanvvq aqnvhgdvhv hstvnatnrg vvprqlpatv rhfinrtveq
       61 dalttllngs gedhtvlvst idglagvgks alvvqwahql reqfsdgely vnlrgfdpva
      121 esvrpaealt gflialgvap eaipiaeeak aaqfrtlvhg rrmllvldna rdteqvlpll
      181 pgssgclvvv tsrqrldglv arhgahrlal ttltrsegrt llsnyvgadr lsdepaavea
      241 llehcaglpl altlvavqaa aepdvtlddl aadlsderdr ldtldaggkt giravfswsy
      301 rtlspnaarl frllglpnsp disssaaaal dgtnvrrtrr alaelsrahl ltrrggdryv
      361 ihdllrayar erahsddted dreaalerll dhhlyatyta serlapdral paleytdtal
      421 wrdfptyeea lawwdseypc vlatirqasa lgmsraawla hvaaypfklr glidefhass
      481 taglrvaeaq eddpararll fhlgeahhfl gefdvgshym rqaadlfsal gerwwealah
      541 nvqgetfleq elyaeaaasv rraleladdl kgapavlgla lahlgdfdaa fsylrysldt
      601 sgsdgfatgy tlhalgiahl lagdtknave slhravehrh hlgqrvgeat sltalgkahq
      661 ardefddarn awqaaltile erghhnvevv ralldtidsh l
//
LOCUS       WP_235874776             140 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-binding dehydrogenase [Saccharopolyspora aridisoli].
ACCESSION   WP_235874776
VERSION     WP_235874776.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora aridisoli
  ORGANISM  Saccharopolyspora aridisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00107.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Saccharopolyspora aridisoli"
                     /db_xref="taxon:2530385"
     Protein         1..140
                     /product="zinc-binding dehydrogenase"
                     /calculated_mol_wt=14637
     Region          <1..137
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
ORIGIN      
        1 maierlggra vdpaavdvpa lvadetqgam adaafdtagv apavrtalgs igsrrplvav
       61 aiyetpletp llelvmhear vqgslcytga efeavialmd egnydttgwv etialgnvve
      121 egfealhrge kmkvlvdptr
//
LOCUS       WP_235874786             401 aa            linear   BCT 02-MAR-2025
DEFINITION  polysaccharide biosynthesis protein [Saccharopolyspora aridisoli].
ACCESSION   WP_235874786
VERSION     WP_235874786.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora aridisoli
  ORGANISM  Saccharopolyspora aridisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 401)
  AUTHORS   Fallarino,A., Mavrangelos,C., Stroeher,U.H. and Manning,P.A.
  TITLE     Identification of additional genes required for O-antigen
            biosynthesis in Vibrio cholerae O1
  JOURNAL   J Bacteriol 179 (7), 2147-2153 (1997)
   PUBMED   9079898
REFERENCE   2  (residues 1 to 401)
  AUTHORS   Lin,W.S., Cunneen,T. and Lee,C.Y.
  TITLE     Sequence analysis and molecular characterization of genes required
            for the biosynthesis of type 1 capsular polysaccharide in
            Staphylococcus aureus
  JOURNAL   J Bacteriol 176 (22), 7005-7016 (1994)
   PUBMED   7961465
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014740.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02719.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Saccharopolyspora aridisoli"
                     /db_xref="taxon:2530385"
     Protein         1..401
                     /product="polysaccharide biosynthesis protein"
                     /calculated_mol_wt=43516
     Region          87..362
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(91,93..96,116..117,143..145,166..168,170,185,208,
                     224,247..250,253..254)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187548"
     Site            order(117,119,123,129,142..144,147,150,168..171,174,178,
                     181,184,254..255,260)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187548"
     Site            order(170,210..212,220,248..249,255..257,260..261,
                     272..274,278,280,315,338,341)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:187548"
     Site            order(186,210,220,224)
                     /site_type="active"
                     /db_xref="CDD:187548"
ORIGIN      
        1 mrrtidhpwa sersdgaeas aepeialret ptlpsfpgrw espanqvlpa rdlamagtdl
       61 elddllgrsp vyidmgevlh slvgkrvlvt gaggsigsel crhihrlgpe elmmldrdes
      121 alhtvqlalh gralldspei vladirdqen lkaiflerqp qvvfhaaalk hlpilqrypg
      181 eawktnvvgt qnvlraaesv gverfvnvst dkaanpasvl gyskriaerl taevaqradg
      241 tyvsvrfgnv lgsrgsvlga fidqisaggp vtvthpdvtr ffmtvseavq lviyaaaigr
      301 sgealvldmg apvriddlar rlirrsgrpi eivytglrgg eklhevlfdr sendhrplqp
      361 siahvsmpgl elaglqeadf rspaelmtll sdlatrvtqp t
//
LOCUS       WP_235874820             167 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator
            [Saccharopolyspora aridisoli].
ACCESSION   WP_235874820
VERSION     WP_235874820.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora aridisoli
  ORGANISM  Saccharopolyspora aridisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Saccharopolyspora aridisoli"
                     /db_xref="taxon:2530385"
     Protein         1..167
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=17315
     Region          <7..166
                     /region_name="PRK15369"
                     /note="two component system response regulator"
                     /db_xref="CDD:185267"
ORIGIN      
        1 matgpcdlai ldlglpdgtg ielvtelrsq gwprivvlas sddpyavraa fqagaqayll
       61 ksaspmvvtd gvrrvldggv yadpsvapvl aagtrvpgtd ntprelsgre vevlqlvadg
      121 rsnkeigeal nlsaltvksh lsrigrklgt gdraqmvala mragvir
//
LOCUS       WP_235874838             164 aa            linear   BCT 02-MAR-2025
DEFINITION  VTT domain-containing protein [Saccharopolyspora aridisoli].
ACCESSION   WP_235874838
VERSION     WP_235874838.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora aridisoli
  ORGANISM  Saccharopolyspora aridisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 164)
  AUTHORS   Morita,K., Hama,Y., Izume,T., Tamura,N., Ueno,T., Yamashita,Y.,
            Sakamaki,Y., Mimura,K., Morishita,H., Shihoya,W., Nureki,O.,
            Mano,H. and Mizushima,N.
  TITLE     Genome-wide CRISPR screen identifies TMEM41B as a gene required for
            autophagosome formation
  JOURNAL   J Cell Biol 217 (11), 3817-3828 (2018)
   PUBMED   30093494
REFERENCE   2  (residues 1 to 164)
  AUTHORS   Inadome,H., Noda,Y., Kamimura,Y., Adachi,H. and Yoda,K.
  TITLE     Tvp38, Tvp23, Tvp18 and Tvp15: novel membrane proteins in the
            Tlg2-containing Golgi/endosome compartments of Saccharomyces
            cerevisiae
  JOURNAL   Exp Cell Res 313 (4), 688-697 (2007)
   PUBMED   17178117
REFERENCE   3  (residues 1 to 164)
  AUTHORS   Inadome,H., Noda,Y., Adachi,H. and Yoda,K.
  TITLE     Immunoisolaton of the yeast Golgi subcompartments and
            characterization of a novel membrane protein, Svp26, discovered in
            the Sed5-containing compartments
  JOURNAL   Mol Cell Biol 25 (17), 7696-7710 (2005)
   PUBMED   16107716
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020893.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09335.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Saccharopolyspora aridisoli"
                     /db_xref="taxon:2530385"
     Protein         1..164
                     /product="VTT domain-containing protein"
                     /calculated_mol_wt=17612
     Region          12..153
                     /region_name="DedA"
                     /note="Membrane integrity protein DedA, putative
                     transporter, DedA/Tvp38 family [Cell
                     wall/membrane/envelope biogenesis]; cl46837"
                     /db_xref="CDD:481177"
ORIGIN      
        1 mltiigllst tfgvsvasal lplisvelfa vglvlkepdi pwwvlalvia tgqiggkllh
       61 fyaargnirl pafmrrekee kpatkgrwks wleqfrencr trpvwagtvl lisaaaslpp
      121 faavaiiagw akvpvstfli tgfigrfarf gvlaaapaam aawl
//
LOCUS       WP_235874863            1075 aa            linear   BCT 02-MAR-2025
DEFINITION  arabinosyltransferase domain-containing protein [Saccharopolyspora
            aridisoli].
ACCESSION   WP_235874863
VERSION     WP_235874863.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora aridisoli
  ORGANISM  Saccharopolyspora aridisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 1075)
  AUTHORS   Belanger,A.E., Besra,G.S., Ford,M.E., Mikusova,K., Belisle,J.T.,
            Brennan,P.J. and Inamine,J.M.
  TITLE     The embAB genes of Mycobacterium avium encode an arabinosyl
            transferase involved in cell wall arabinan biosynthesis that is the
            target for the antimycobacterial drug ethambutol
  JOURNAL   Proc Natl Acad Sci U S A 93 (21), 11919-11924 (1996)
   PUBMED   8876238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016484.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04602.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1075
                     /organism="Saccharopolyspora aridisoli"
                     /db_xref="taxon:2530385"
     Protein         1..1075
                     /product="arabinosyltransferase domain-containing protein"
                     /GO_function="GO:0052636 - arabinosyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0071766 - Actinobacterium-type cell wall
                     biogenesis [Evidence IEA]"
                     /calculated_mol_wt=116576
     Region          33..185
                     /region_name="Arabino_trans_N"
                     /note="Arabinosyltransferase concanavalin like domain;
                     pfam17689"
                     /db_xref="CDD:435976"
     Region          190..647
                     /region_name="Arabinose_trans"
                     /note="Mycobacterial cell wall arabinan synthesis protein;
                     pfam04602"
                     /db_xref="CDD:377388"
     Region          690..1047
                     /region_name="Arabino_trans_C"
                     /note="EmbC C-terminal domain; pfam14896"
                     /db_xref="CDD:434294"
ORIGIN      
        1 mqqesakklr llatllglvg tvlallvpfl pvnhkvgtlr wptaegtksv saplvtyapv
       61 wldakvpcas arsldarteg pglllstnsp dsdsgkltgl vlqvdngqal lyskgqqigt
      121 tplpagdctl kvhadaggtt atigkerwvn qtgdqrpqlt giystldntr ddvrgldfqa
      181 rvdnrfsswa tplktivivl tlasfigsvl clrrldalag rraprlapkr wwkptlrdis
      241 vfvalgiwwl igamtsddgy vlsmvrseqs agyvsnyyrw fanpespfgw fyevyslwvr
      301 vstatpwvrl pallmgiisw llisrevlpr lgqqvrrsna agwaaaavfl afwlpynngl
      361 raepvvvlfs llalcavera vsterltpaa lglvaaalsv gvnphgliav lpyiagfkpl
      421 hrmvrkraqe fgwlpvlapl masgfviltl vfydqtwrsv mdsmelkttf gpngrwyeel
      481 srylllfses adgslsrrlp vllvilcvat cgvvllrrgr irgaalgpsr rllavaamsf
      541 avlaltptkh thhfgifaav ggalaaltal atsttvlrsr rnrmafvtgl lvilafaatg
      601 pnawwyvsgw gvpwfdkpps vkgyrastmi lvlaaitgii avvehlride nnpevvdesw
      661 eskekrnlal rwgtaplsvl calmvlgela afgkgiveqg psytlatdni kqltqqscgl
      721 sdsvgvetnp regvlkaspq qptvpapakq pdlkmppqrl anqedaqqyl qpkqvgfndp
      781 gvpptdessp dapswrppnq fggpeapvwg sydeegqgtg elrtpwldip eearsgklpv
      841 aisiagsetg anqvyfelgk dtpqgfqltn rypveqgppp gwrehrymlg geaegatklr
      901 mvlvdqslgq sgwlavsapr vpkltqltqf vgddptfvew paglvhpcle isglyngiae
      961 mpkfrvsgge qvrgtgegws spdaggpfgw mtvassvrnl ptyltndpqk dwgslyqvhp
     1021 ytpdalpasa alemhteths glwspgppaq glnlpgdmps sddrtdipaf dtden
//
LOCUS       WP_235874386             605 aa            linear   BCT 02-MAR-2025
DEFINITION  M56 family metallopeptidase [Flavobacterium oreochromis].
ACCESSION   WP_235874386
VERSION     WP_235874386.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium oreochromis
  ORGANISM  Flavobacterium oreochromis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 605)
  AUTHORS   Lopez-Pelegrin,M., Cerda-Costa,N., Martinez-Jimenez,F.,
            Cintas-Pedrola,A., Canals,A., Peinado,J.R., Marti-Renom,M.A.,
            Lopez-Otin,C., Arolas,J.L. and Gomis-Ruth,F.X.
  TITLE     A novel family of soluble minimal scaffolds provides structural
            insight into the catalytic domains of integral membrane
            metallopeptidases
  JOURNAL   J Biol Chem 288 (29), 21279-21294 (2013)
   PUBMED   23733187
REFERENCE   2  (residues 1 to 605)
  AUTHORS   Archer,G.L. and Bosilevac,J.M.
  TITLE     Signaling antibiotic resistance in staphylococci
  JOURNAL   Science 291 (5510), 1915-1916 (2001)
   PUBMED   11245199
REFERENCE   3  (residues 1 to 605)
  AUTHORS   Zhang,H.Z., Hackbarth,C.J., Chansky,K.M. and Chambers,H.F.
  TITLE     A proteolytic transmembrane signaling pathway and resistance to
            beta-lactams in staphylococci
  JOURNAL   Science 291 (5510), 1962-1965 (2001)
   PUBMED   11239156
REFERENCE   4  (residues 1 to 605)
  AUTHORS   Brakstad,O.G. and Maeland,J.A.
  TITLE     Mechanisms of methicillin resistance in staphylococci
  JOURNAL   APMIS 105 (4), 264-276 (1997)
   PUBMED   9164468
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017390.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05569.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Flavobacterium oreochromis"
                     /db_xref="taxon:2906078"
     Protein         1..605
                     /product="M56 family metallopeptidase"
                     /calculated_mol_wt=70752
     Region          94..380
                     /region_name="MecR1"
                     /note="Signal transducer regulating beta-lactamase
                     production, contains metallopeptidase domain [Signal
                     transduction mechanisms]; COG4219"
                     /db_xref="CDD:443363"
     Region          513..594
                     /region_name="CpxP_like"
                     /note="CpxP component of the bacterial Cpx-two-component
                     system and related proteins; cl01482"
                     /db_xref="CDD:470220"
     Site            order(541,545,548..549,553,561,565,568,572,576,583,
                     586..587,590,593)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:197366"
     Region          558..605
                     /region_name="UDM1_RNF168_RNF169-like"
                     /note="UDM1 (ubiquitin-dependent DSB recruitment module 1)
                     found in RING finger proteins RNF168, RNF169 and similar
                     proteins; cd22249"
                     /db_xref="CDD:409016"
ORIGIN      
        1 mnsyflhcll fsckqrnffr snrwflltgl ataiilplff irkyifistq iktnaaafqa
       61 ikhinssqts atpsidwifi fiifyllvfl fllikylisf fslykllkqn evlkrgsfkl
      121 vdldqeiapf sffnyivyns dfytedelqs illhervhsq dkhsidllis hlfctffwfn
      181 pfvwfykkai sqnleyiadq kaskflkdkt kyqkallkvi tqrncfsisn hfnssliknr
      241 ivmlnqsqse kkkswkyvli ipalvsfilf fqvktiaqek nitqssssgl yittdknssd
      301 qemkddakia kekfgvtikf skvkrntkge itaikieykd legkkgmthi qgdepikpiy
      361 fhktknkigf gkanelnivk nlhksnneds nfgfsfldke enlapdtnei eipspetpda
      421 itksdkkgdn kpsiknysks viikkqnngk peviidgkqi etdseeykkm lkdfngnfef
      481 nihedgpmvl kfnnedvfkf dsneiekitk dalsnsqkql kklrdkmnnm rpemdqmkie
      541 mekikpedfn fnfnwnekes eaemkkaree mlkareemik areemlkake emlkaknqqs
      601 ktkka
//
LOCUS       WP_235874887             418 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Saccharopolyspora aridisoli].
ACCESSION   WP_235874887
VERSION     WP_235874887.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora aridisoli
  ORGANISM  Saccharopolyspora aridisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 418)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 418)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 418)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 418)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Saccharopolyspora aridisoli"
                     /db_xref="taxon:2530385"
     Protein         1..418
                     /product="ATP-binding protein"
                     /calculated_mol_wt=43821
     Region          43..>111
                     /region_name="PAS"
                     /note="PAS fold; pfam00989"
                     /db_xref="CDD:395786"
     Region          <111..371
                     /region_name="WalK"
                     /note="Sensor histidine kinase WalK [Signal transduction
                     mechanisms]; COG5002"
                     /db_xref="CDD:444026"
ORIGIN      
        1 mtalgytali iaalllgavg gflaaggprp yrksqpqgpt vaellqrqvh tstsgvvlln
       61 rfgdvvlhnp ravelgvihd yradpraqka aeqarktget vtvdlcpldg raslagrgpa
      121 avigdvrplg dgftvvdaad qsdsvrleat rrdfvanvsh elktpvgala llaealldta
      181 edpeevrrfs tkilhestrl gtlvselial srlqgaerlp elhsvevdev veealgrsrl
      241 aaesagieia vdgpsgylle gdrallvtal tnlitnavny sshgspvsis rrlsedfvei
      301 avtdrgigie pehhervfer ffrvdparsr atggtglgla ivkhvaanhg gevklwsrpg
      361 tgstftirvp rhgtggvdga gevggdvatt epdraapaar sitesadgvt tvetggvr
//
LOCUS       WP_235875031             409 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Saccharopolyspora aridisoli].
ACCESSION   WP_235875031
VERSION     WP_235875031.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora aridisoli
  ORGANISM  Saccharopolyspora aridisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Saccharopolyspora aridisoli"
                     /db_xref="taxon:2530385"
     Protein         1..409
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=40930
     Region          23..358
                     /region_name="AraJ"
                     /note="Predicted arabinose efflux permease AraJ, MFS
                     family [Carbohydrate transport and metabolism]; COG2814"
                     /db_xref="CDD:442063"
ORIGIN      
        1 mststslady raalttpgar tpvvtsllgr lpiamigmal llyvqresss faiagavsaa
       61 eligvamgsv aqgrivdrvg pskplyitsv lftasvvatl aaieleasts lvvagafamg
      121 llqpnigsas ralwghllpa grvreaafsy eaislevffi lgpglagllv ampwagtgvv
      181 vgsacmvlgs vgfastraar tqrpdpsehv gamlgaiaap amrtvalaal gfgvvigfie
      241 vavpaaavda gqptmggllm slasvssvav gvvygvhpwp rpmhlrlpal llgfaglval
      301 laipttllgl almllvagcl itpqstahsv avefaappgt aaeafgwvvt svtlgsaigq
      361 stsgqlvels gpptaflvag aagaalaavl hlrrntllrs qtdltlass
//
LOCUS       WP_235875036             167 aa            linear   BCT 02-MAR-2025
DEFINITION  flavin reductase [Saccharopolyspora aridisoli].
ACCESSION   WP_235875036
VERSION     WP_235875036.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora aridisoli
  ORGANISM  Saccharopolyspora aridisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 167)
  AUTHORS   Parry,R.J. and Li,W.
  TITLE     An NADPH:FAD oxidoreductase from the valanimycin producer,
            Streptomyces viridifaciens. Cloning, analysis, and overexpression
  JOURNAL   J Biol Chem 272 (37), 23303-23311 (1997)
   PUBMED   9287340
REFERENCE   2  (residues 1 to 167)
  AUTHORS   Blanc,V., Lagneaux,D., Didier,P., Gil,P., Lacroix,P. and Crouzet,J.
  TITLE     Cloning and analysis of structural genes from Streptomyces
            pristinaespiralis encoding enzymes involved in the conversion of
            pristinamycin IIB to pristinamycin IIA (PIIA): PIIA synthase and
            NADH:riboflavin 5'-phosphate oxidoreductase
  JOURNAL   J Bacteriol 177 (18), 5206-5214 (1995)
   PUBMED   7665509
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013756.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01613.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Saccharopolyspora aridisoli"
                     /db_xref="taxon:2530385"
     Protein         1..167
                     /product="flavin reductase"
                     /GO_function="GO:0010181 - FMN binding [Evidence IEA]"
                     /calculated_mol_wt=17442
     Region          11..161
                     /region_name="Pyridoxine 5'-phosphate (PNP) oxidase-like
                     and flavin reductase-like proteins"
                     /note="The PNPOx-like superfamily is composed of
                     pyridoxine 5'-phosphate (PNP) oxidases and other flavin
                     mononucleotide (FMN) binding proteins, which catalyze
                     FMN-mediated redox reactions. Flavin reductases catalyze
                     the reduction of FMN or FAD using NAD(P)H as...; cl00381"
                     /db_xref="CDD:469750"
ORIGIN      
        1 madstpaqre fraamanlss gvnivttdgp rgragitvsa acsvtddppt mlvcvhrasr
       61 ahdvlagner vcvnvlgsgq qdlalrfaga tglpmherfa gvvcdfaevp vlrdaaasvi
      121 ghlaqvraqg shsvmfveve rvitrsgsga lvyfqrefhs lagarrg
//
LOCUS       WP_235875050             329 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase [Saccharopolyspora aridisoli].
ACCESSION   WP_235875050
VERSION     WP_235875050.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora aridisoli
  ORGANISM  Saccharopolyspora aridisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 329)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 329)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Saccharopolyspora aridisoli"
                     /db_xref="taxon:2530385"
     Protein         1..329
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=34933
     Region          7..303
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     Site            order(23..25,55,60,86,129,159..160,179,207..212,258,
                     275..278,283,286..287)
                     /site_type="active"
                     /db_xref="CDD:381296"
     Site            order(55,60,86,129)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381296"
ORIGIN      
        1 mtaqlntrrl gatgpnassp glgcmglsgv yghtdddqsl kvihayldag gsvldtgdfy
       61 ghghnemlig ralrdrdrdq vvlsvkfgam rgpdgaslgi darpeavqnf lhfslqrlgv
      121 dhvdvyrpar ldpdvpieet igamaelvdk gyvrhiglse vgadtlrraa svapisdlqi
      181 eysmltrtie deilptcrel gigitaygvl srgliggsga iggglsfmpr fqegnrehne
      241 alvarvreva aekdatvaql aiawvaaqge dvlpvvgarr leqvdsmigs navaldagdl
      301 arideliprg avrgdrypta lmaqldsek
//
LOCUS       WP_235875072             276 aa            linear   BCT 02-MAR-2025
DEFINITION  methylenetetrahydrofolate reductase [Saccharopolyspora aridisoli].
ACCESSION   WP_235875072
VERSION     WP_235875072.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora aridisoli
  ORGANISM  Saccharopolyspora aridisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 276)
  AUTHORS   Guenther,B.D., Sheppard,C.A., Tran,P., Rozen,R., Matthews,R.G. and
            Ludwig,M.L.
  TITLE     The structure and properties of methylenetetrahydrofolate reductase
            from Escherichia coli suggest how folate ameliorates human
            hyperhomocysteinemia
  JOURNAL   Nat Struct Biol 6 (4), 359-365 (1999)
   PUBMED   10201405
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02219.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Saccharopolyspora aridisoli"
                     /db_xref="taxon:2530385"
     Protein         1..276
                     /product="methylenetetrahydrofolate reductase"
                     /EC_number="1.5.1.20"
                     /GO_function="GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA]"
                     /GO_process="GO:0006555 - methionine metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=29431
     Region          40..267
                     /region_name="MTHFR"
                     /note="Methylenetetrahydrofolate reductase (MTHFR).
                     5,10-Methylenetetrahydrofolate is reduced to
                     5-methyltetrahydrofolate by methylenetetrahydrofolate
                     reductase, a cytoplasmic, NAD(P)-dependent enzyme.
                     5-methyltetrahydrofolate is utilized by methionine
                     synthase...; cl00246"
                     /db_xref="CDD:444783"
     Site            order(41,66,96..98,109..110,130,132,136,141,148,151,154,
                     159,161,256)
                     /site_type="other"
                     /note="FAD binding site [chemical binding]"
                     /db_xref="CDD:238299"
ORIGIN      
        1 msavlaaalr nasyevlpfg steeevlahv prdvvltvtt teargleptv dlavrlskng
       61 yataphlaar lvrdraelde iaarllesgv drvfvvggda aepagefsda eglllalaeg
      121 grdfshigia gypeghgtip dsvisealrr kavhaheivt qlcfnpattt gwagrlhdsg
      181 ittpvrvgvp gsvnrqklir vsaglglgqs arflakqsam fwrfflpsgy rpdklvaglt
      241 dqitspgnai sgfhlftfnd larterwrqd rlaals
//
LOCUS       WP_235875077             261 aa            linear   BCT 02-MAR-2025
DEFINITION  TIM barrel protein [Saccharopolyspora aridisoli].
ACCESSION   WP_235875077
VERSION     WP_235875077.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora aridisoli
  ORGANISM  Saccharopolyspora aridisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 261)
  AUTHORS   Fry,J., Wood,M. and Poole,P.S.
  TITLE     Investigation of myo-inositol catabolism in Rhizobium leguminosarum
            bv. viciae and its effect on nodulation competitiveness
  JOURNAL   Mol Plant Microbe Interact 14 (8), 1016-1025 (2001)
   PUBMED   11497462
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013429.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01261.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Saccharopolyspora aridisoli"
                     /db_xref="taxon:2530385"
     Protein         1..261
                     /product="TIM barrel protein"
                     /calculated_mol_wt=27569
     Region          5..239
                     /region_name="Hyi"
                     /note="Hydroxypyruvate/dehydroerythronate isomerase,
                     Hyi/OtnI family [Carbohydrate transport and metabolism];
                     cl46782"
                     /db_xref="CDD:481122"
ORIGIN      
        1 mtgirlaaca emlyldlpfl drikriadrg llveiwdwss kdveslaasg aefssmtgyl
       61 tgnltepegi adllasarrs levaerldcp rlnlhgtglg egglpvrpvq vvtpamwlta
      121 antlrqvael gaqagrtfvl enlnlavdhp gtpfataadt lalvravdhp nlrlnldlyh
      181 aqigegnlie lvtealpyig eiqvadvpgr cepgtgeiny pavaaalkri gytgvvglea
      241 waaddpdaal eafeaaftaa g
//
LOCUS       WP_235875107             126 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5313 family protein [Saccharopolyspora aridisoli].
ACCESSION   WP_235875107
VERSION     WP_235875107.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora aridisoli
  ORGANISM  Saccharopolyspora aridisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036408.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17240.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Saccharopolyspora aridisoli"
                     /db_xref="taxon:2530385"
     Protein         1..126
                     /product="DUF5313 family protein"
                     /calculated_mol_wt=14497
     Region          2..102
                     /region_name="DUF5313"
                     /note="Family of unknown function (DUF5313); pfam17240"
                     /db_xref="CDD:435805"
ORIGIN      
        1 mrpdplrwtw yafggrlpar hrawvlhdvt crtwvlrhta rslvqispgl lflllpgplw
       61 iramsvlggv mlalwyslsy mehtceyrlh khgypigtgr atreaahaea raqrasryde
      121 iyrnng
//
LOCUS       WP_235875130             390 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent monooxygenase [Saccharopolyspora aridisoli].
ACCESSION   WP_235875130
VERSION     WP_235875130.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora aridisoli
  ORGANISM  Saccharopolyspora aridisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 390)
  AUTHORS   Schreuder,H.A., van der Laan,J.M., Swarte,M.B., Kalk,K.H., Hol,W.G.
            and Drenth,J.
  TITLE     Crystal structure of the reduced form of p-hydroxybenzoate
            hydroxylase refined at 2.3 A resolution
  JOURNAL   Proteins 14 (2), 178-190 (1992)
   PUBMED   1409567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01494.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Saccharopolyspora aridisoli"
                     /db_xref="taxon:2530385"
     Protein         1..390
                     /product="FAD-dependent monooxygenase"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /calculated_mol_wt=42145
     Region          1..386
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mrvlvsgasi agsavafwlh rngfdvtvve kaasvrtggy pidvrgtale vvgrmgvlpq
       61 lrqadiktqr ltfldadgsv aasvhpqhvv ggvdgqdlei rrgdltevly eavrddvefa
      121 fndsidalde redgvrvtfr sgaqrkfdlv vgadglhsrt relifgpelq fhrylgfcfa
      181 gfttpntlgl shegvmwnap gkaaalygvr dsdelhgfln iarphppmel lrdpdaqrel
      241 vtdafagegw eiptmvkamr esddlffdtv sqihlpawsr grvalvgdaa hapsfltgqg
      301 sslalvgayv ladalaahpd hteaftayea ttrefvklnq alvgegdatl fpttrealek
      361 rnaglralae mppatgrpeh saltlpaprr
//
LOCUS       WP_235875182             123 aa            linear   BCT 02-MAR-2025
DEFINITION  VanZ family protein [Saccharopolyspora aridisoli].
ACCESSION   WP_235875182
VERSION     WP_235875182.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora aridisoli
  ORGANISM  Saccharopolyspora aridisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 123)
  AUTHORS   Arthur,M., Depardieu,F., Molinas,C., Reynolds,P. and Courvalin,P.
  TITLE     The vanZ gene of Tn1546 from Enterococcus faecium BM4147 confers
            resistance to teicoplanin
  JOURNAL   Gene 154 (1), 87-92 (1995)
   PUBMED   7867956
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016763.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04892.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Saccharopolyspora aridisoli"
                     /db_xref="taxon:2530385"
     Protein         1..123
                     /product="VanZ family protein"
                     /calculated_mol_wt=12821
     Region          12..111
                     /region_name="VanZ"
                     /note="VanZ-like family protein (function unknown)
                     [Function unknown]; cl42358"
                     /db_xref="CDD:478153"
ORIGIN      
        1 mislldhyrn qlarlpllia flvsvivlft pesgvptapp gtdkvvhftl faalaitgri
       61 sgwrpssllp alvayaalse vlqgvlplgr scdlldgvvd vagaligwav falrsrssaa
      121 ssr
//
LOCUS       WP_235875199             140 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4326 domain-containing protein [Saccharopolyspora aridisoli].
ACCESSION   WP_235875199
VERSION     WP_235875199.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora aridisoli
  ORGANISM  Saccharopolyspora aridisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025577.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14216.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Saccharopolyspora aridisoli"
                     /db_xref="taxon:2530385"
     Protein         1..140
                     /product="DUF4326 domain-containing protein"
                     /calculated_mol_wt=15666
     Region          75..136
                     /region_name="DUF4326"
                     /note="Domain of unknown function (DUF4326); pfam14216"
                     /db_xref="CDD:433779"
ORIGIN      
        1 mtegrleaev vrvlpeeass wsddererad alldghavvv nvrkdgphkh lvpwlleqdv
       61 ltyvghsgpr hswpqsdfas pfvseaktdr eamvrhyeqw ldgqpdller lrggelsgra
      121 lgcwcaprac hadvlahrar
//
LOCUS       WP_235875264             383 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Saccharopolyspora aridisoli].
ACCESSION   WP_235875264
VERSION     WP_235875264.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora aridisoli
  ORGANISM  Saccharopolyspora aridisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 383)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 383)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 383)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 383)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Saccharopolyspora aridisoli"
                     /db_xref="taxon:2530385"
     Protein         1..383
                     /product="ATP-binding protein"
                     /calculated_mol_wt=41247
     Region          <68..301
                     /region_name="CitA"
                     /note="Sensor histidine kinase DipB regulating
                     citrate/malate metabolism [Signal transduction
                     mechanisms]; COG3290"
                     /db_xref="CDD:442519"
     Region          191..299
                     /region_name="HATPase_c"
                     /note="Histidine kinase-, DNA gyrase B-, and HSP90-like
                     ATPase; pfam02518"
                     /db_xref="CDD:460579"
ORIGIN      
        1 mvillaflvs lqrlkfqirl rdeeahhlvt rrlpalmdae rglpidvpgp lrpnlgdtpf
       61 hqemqtaigq fagfadetrq radraakatl istmrgvqsl aneqqlaite mqhehddpav
      121 laglmkidha nsqlvrraqa tavlcgtwpg qqrsaapvld vvrgatsrir dylrieahse
      181 selsvssrav epvvlalael ldnaarysqp athvqvhfqp ahnglsivvd dagvgmnpda
      241 rerakalltg revvdinklg dppqigfala gvlaarygfk vfveasspyg gmravlflpn
      301 ellakaetpa papamnepaa adrqtstglp krqrrshavp aqsaehgnwg mgkpsvmgaw
      361 qrgsltgrgs edepddekgt sap
//
LOCUS       WP_235875277             140 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3307 domain-containing protein [Saccharopolyspora aridisoli].
ACCESSION   WP_235875277
VERSION     WP_235875277.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora aridisoli
  ORGANISM  Saccharopolyspora aridisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023178.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11750.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Saccharopolyspora aridisoli"
                     /db_xref="taxon:2530385"
     Protein         1..140
                     /product="DUF3307 domain-containing protein"
                     /calculated_mol_wt=14972
ORIGIN      
        1 mpallvahnv adhwvqtshq agakglpgwp grwncakhvs sytavtagsv aliwvafglt
       61 isvlgfvlgq vvsavthywa drrstlrrla eltgndgfyr lgapragrdd npslgtgayv
      121 ldqswhwlwl avaalvtali
//
LOCUS       WP_235875735             216 aa            linear   BCT 02-MAR-2025
DEFINITION  GPR1/FUN34/YaaH family transporter [Saccharopolyspora terrae].
ACCESSION   WP_235875735
VERSION     WP_235875735.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora terrae
  ORGANISM  Saccharopolyspora terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 216)
  AUTHORS   Paiva,S., Devaux,F., Barbosa,S., Jacq,C. and Casal,M.
  TITLE     Ady2p is essential for the acetate permease activity in the yeast
            Saccharomyces cerevisiae
  JOURNAL   Yeast 21 (3), 201-210 (2004)
   PUBMED   14968426
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013358.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01184.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Saccharopolyspora terrae"
                     /db_xref="taxon:2530384"
     Protein         1..216
                     /product="GPR1/FUN34/YaaH family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=21791
     Region          21..>132
                     /region_name="Gpr1_Fun34_YaaH"
                     /note="GPR1/FUN34/yaaH family; cl00685"
                     /db_xref="CDD:469877"
ORIGIN      
        1 mtasdavttd qdrtshrkpe pvpgplsgdp aligvptfvv gsialgmtlv gfvppeavga
       61 pvaiilaatg tgqfvaalwa aaigqsavas ifgtfsgfwl sygllvlglt hgwfgvpdgs
      121 atatqalflt swavvvalla latlrlpaay tvlfaliaaa lvlvlvatvq dsaqlkavgg
      181 fvvftfaalg cylflhvmse atggrglplg kpvlrs
//
LOCUS       WP_235876456             551 aa            linear   BCT 02-MAR-2025
DEFINITION  trypsin-like peptidase domain-containing protein [Saccharopolyspora
            terrae].
ACCESSION   WP_235876456
VERSION     WP_235876456.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora terrae
  ORGANISM  Saccharopolyspora terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024758.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13365.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Saccharopolyspora terrae"
                     /db_xref="taxon:2530384"
     Protein         1..551
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /calculated_mol_wt=56362
     Region          <3..194
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          282..550
                     /region_name="DegQ"
                     /note="Periplasmic serine protease, S1-C subfamily,
                     contain C-terminal PDZ domain [Posttranslational
                     modification, protein turnover, chaperones]; COG0265"
                     /db_xref="CDD:440035"
ORIGIN      
        1 msdqpgtpaq gpgarrdgpa rgqqgaepvh pwqggamtgr gvpadrfspa parshdsngh
       61 tpdrlqprpl drpevdpsqr nafarpqgvs gsfdpdehgl aargieqapp ppdalvqafg
      121 rppqssdplq rapgekpmtp etepdpalws sgdrdpwrdp aagailgppa vseeqpdddg
      181 erergpllsa revifghrvh pralailgvv allvglaggf lgritaeegn plvnpdvtla
      241 evdqgsgdrp rgavsqvaqr vvpavvsiev riggqggsgs gvvidgngyv vtnnhvvsma
      301 adtpnaqvst vfhdgtrapa rvvgrdvktd lavlkvevsn ptvaqlgdsd elrvgddvia
      361 igsplglagt vttgivssvh rpvrlagegt dtnavidaiq tdaainpgns ggalvdgsga
      421 vvginsairt lgsggeggsi glgfaipidd vrriaqelir tgtvrhadlg vnvksvsdgl
      481 adgaqvqnvq dgssaagggm aegdviikvg drkvgsadel ivavdrhqvg ervpvtvvrq
      541 grelvldvtl k
//
LOCUS       WP_235876655             559 aa            linear   BCT 02-MAR-2025
DEFINITION  protein kinase domain-containing protein [Saccharopolyspora
            terrae].
ACCESSION   WP_235876655
VERSION     WP_235876655.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora terrae
  ORGANISM  Saccharopolyspora terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 559)
  AUTHORS   Hunter,T. and Plowman,G.D.
  TITLE     The protein kinases of budding yeast: six score and more
  JOURNAL   Trends Biochem Sci 22 (1), 18-22 (1997)
   PUBMED   9020587
REFERENCE   2  (residues 1 to 559)
  AUTHORS   Hanks,S.K. and Hunter,T.
  TITLE     Protein kinases 6. The eukaryotic protein kinase superfamily:
            kinase (catalytic) domain structure and classification
  JOURNAL   FASEB J 9 (8), 576-596 (1995)
   PUBMED   7768349
REFERENCE   3  (residues 1 to 559)
  AUTHORS   Hanks,S.K. and Quinn,A.M.
  TITLE     Protein kinase catalytic domain sequence database: identification
            of conserved features of primary structure and classification of
            family members
  JOURNAL   Methods Enzymol 200, 38-62 (1991)
   PUBMED   1956325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00069.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Saccharopolyspora terrae"
                     /db_xref="taxon:2530384"
     Protein         1..559
                     /product="protein kinase domain-containing protein"
                     /GO_function="GO:0004672 - protein kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006468 - protein phosphorylation
                     [Evidence IEA]"
                     /calculated_mol_wt=60858
     Region          23..282
                     /region_name="STKc_PknB_like"
                     /note="Catalytic domain of bacterial Serine/Threonine
                     kinases, PknB and similar proteins; cd14014"
                     /db_xref="CDD:270916"
     Site            order(23,47..48,81,86,91..94,107)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:270916"
     Site            order(30..31,33..36,38,51,53,89,106..109,113,115,152,154,
                     156..157,159,169..170,173,190..193)
                     /site_type="active"
                     /db_xref="CDD:270916"
     Site            order(30..31,33..36,38,51,53,89,106..109,113,154,156..157,
                     159,169..170)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270916"
     Site            order(34,113,115,152,154,156,173,190..193)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270916"
     Site            order(169..177,186..193)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270916"
     Region          447..557
                     /region_name="CBM6_xylanase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); many are
                     appended to glycoside hydrolase (GH) family 11 and GH43
                     xylanase domains; cd04084"
                     /db_xref="CDD:271150"
     Site            order(455..456,516,551)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:271150"
ORIGIN      
        1 mredqlspsh adtsssgrvi ggryrldrti gkggmgyvws gtdevlerpv avkelhlpad
       61 lpeegaadlr eralrearam atlshpntvm lydvvredvs gpfvvmelvp grslsailkk
      121 hralnhyqla vmidgvaaal daahrvgivh rdvkpgnvll gprgqvklad fglsrniaet
      181 tmtrsemllg tpaylppeia rrgaldsqad lwslgatlys aaegrppydk tsdplviisa
      241 ivhgplprhh qtgpigevlg gllmkdpqrr mplvevrrrl heivrhagde pfeplldpnt
      301 peaterlpsr rpvpsvsahp vppvyapres rpaerrqsvp rvtppprppi ppqqvraaqp
      361 vppaqsehsh epepaaprrr rrriiiaata lvvvaglalg yavvtedsse nenesteikp
      421 sepigsafev ieaersgwig rplhtvssng atyaaplrsg dvmrfdgvdf gaspangmvl
      481 rfrttrsvsd ggritlrlds ptgeyiselr igrpdnaplp mtsrapffrg itgthtvylv
      541 vsgtvpseil qldwvqfrh
//
LOCUS       WP_235876670             259 aa            linear   BCT 02-MAR-2025
DEFINITION  SAM-dependent methyltransferase [Saccharopolyspora terrae].
ACCESSION   WP_235876670
VERSION     WP_235876670.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora terrae
  ORGANISM  Saccharopolyspora terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 259)
  AUTHORS   Rutherford,K., Parson,W.W. and Daggett,V.
  TITLE     The histamine N-methyltransferase T105I polymorphism affects active
            site structure and dynamics
  JOURNAL   Biochemistry 47 (3), 893-901 (2008)
   PUBMED   18154359
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016550.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04672.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Saccharopolyspora terrae"
                     /db_xref="taxon:2530384"
     Protein         1..259
                     /product="SAM-dependent methyltransferase"
                     /EC_number="2.1.1.-"
                     /calculated_mol_wt=28448
     Region          2..257
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
ORIGIN      
        1 meidintpqs ariwnywlgg kdhyavdrea gdaviahipd ipegaraera flvravrhlv
       61 kteglrqfld vgtglptann thevaqrlap esrivyvdnd ptvlaharal ltstpegttd
      121 yldadmrrpe eiieaakrtl dfsrpiglmm lgvvnhlmdd eeayrvvrel vdalpegsff
      181 vlthssaevh gepmlramre tterggtpir artaaeiedl fagtellepg vvscsqwrpd
      241 tegatpkpvy lfggvgrvg
//
LOCUS       WP_235876671             270 aa            linear   BCT 02-MAR-2025
DEFINITION  NBR1-Ig-like domain-containing protein [Saccharopolyspora terrae].
ACCESSION   WP_235876671
VERSION     WP_235876671.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora terrae
  ORGANISM  Saccharopolyspora terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027484.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16158.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Saccharopolyspora terrae"
                     /db_xref="taxon:2530384"
     Protein         1..270
                     /product="NBR1-Ig-like domain-containing protein"
                     /calculated_mol_wt=30353
     Region          157..269
                     /region_name="NBR1_like"
                     /note="Functionally uncharacterized domain in neighbor of
                     Brca1 Gene 1 and related proteins; cd14947"
                     /db_xref="CDD:271343"
ORIGIN      
        1 mdgsviredd srkrgrkqqr pdpqespvae fawqlcelke aagdpsydrm rsefgaaask
       61 salsaaargk dlpswettwe fvrclavgvl gqdestarre wskrwesart vpepdpeppr
      121 peprrwpkwl vagvaavlvv igavwwwmpe qrpipgdasl mlsetvpdgt efamrqnfak
      181 twevrnvgre pwegrylaqv fregdaacta pqrvsvgdvs pgetvtlavp vftgnepgrc
      241 kiawkmvded grqffpedlr pvffdiqirp
//
LOCUS       WP_235876735             860 aa            linear   BCT 02-MAR-2025
DEFINITION  PEP/pyruvate-binding domain-containing protein [Saccharopolyspora
            terrae].
ACCESSION   WP_235876735
VERSION     WP_235876735.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora terrae
  ORGANISM  Saccharopolyspora terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 860)
  AUTHORS   Lim,K., Read,R.J., Chen,C.C., Tempczyk,A., Wei,M., Ye,D., Wu,C.,
            Dunaway-Mariano,D. and Herzberg,O.
  TITLE     Swiveling domain mechanism in pyruvate phosphate dikinase
  JOURNAL   Biochemistry 46 (51), 14845-14853 (2007)
   PUBMED   18052212
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01326.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..860
                     /organism="Saccharopolyspora terrae"
                     /db_xref="taxon:2530384"
     Protein         1..860
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0016310 - phosphorylation [Evidence IEA]"
                     /calculated_mol_wt=91678
     Region          19..860
                     /region_name="PRK06241"
                     /note="phosphoenolpyruvate synthase; Validated"
                     /db_xref="CDD:235751"
ORIGIN      
        1 mrggvifelt hegvvavpvl rldevragtg evvggkaanl geligagfrv ppgfvittaa
       61 yeevcrvadl ldglpgsapk irdritaral ppglataitd ayaelgsgpv avrssataed
      121 lpdasfagqq dtylnvvgae alldavrrcw aslwtdrais yrevngidhs svrlavvvqe
      181 mvdasaagvl ftadpvtgnr adcvidantg lgesvvsgav tpdhfvvsgd ritkrlgdkp
      241 tsvravasgg vetvaqdsaa psisdeqare laelgrevar hygtpqdlew aigadgvwlt
      301 qsrpittlfp lpaetedglr mylsvnvaqg vyrpltpmgv atlgllatgv lrelglsapg
      361 arpapfrpvd gwlflditgt tgnrvgrall prlmaaaear tgrvyeslld dprlprkpga
      421 tartlrafgl llarnripll fagvlrdpar araeafrrvd elraelaspe prtarerlda
      481 arhallrsta prmawvaprm mpilllsrll pklvrateae ihvvlsgiph nvttemdlel
      541 waiaqrigpe vadlparyrd ralpadvlra lddflathgh rtageidagv prwseepgqv
      601 lalvenyart geaghdaaer frqraeeavv qaseivsrlp nrvhaglanf lldrvrqlag
      661 mrelpkycav lgiaaarthl rdigdeltsa grisdpsdvf fldyeelsdl idgfdhreli
      721 ttrrathere lrrkhlprll lsdgtepetl lattgsgnal rgtsasagtv tgiarvvrdp
      781 anarlspgdv lvapstdpgw tplfltasgl vmemggpnsh gatvareygi pavvgvpdat
      841 tritdgqtit vngsagvvel
//
LOCUS       WP_235876801             224 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1990 family protein [Saccharopolyspora terrae].
ACCESSION   WP_235876801
VERSION     WP_235876801.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora terrae
  ORGANISM  Saccharopolyspora terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020906.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09348.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Saccharopolyspora terrae"
                     /db_xref="taxon:2530384"
     Protein         1..224
                     /product="DUF1990 family protein"
                     /calculated_mol_wt=25436
     Region          15..172
                     /region_name="DUF1990"
                     /note="Domain of unknown function (DUF1990); cl01969"
                     /db_xref="CDD:470416"
ORIGIN      
        1 mnftedephs pggewnfdth rcflareapg ppepggawdi aralvrdyef sdpdrvravy
       61 dgreellgrn mllegrfygl rfdmgvrvtv videtregdr rvwgwgyetl eghlergrmt
      121 yevikdmssg tvefvitgfs qddpaldpvl rlgwrlfgra tqlgfyrrcg armhelvqar
      181 ladgrgatge rrhdgpllap sdarpgpfer falridhpss grrr
//
LOCUS       WP_235876818             161 aa            linear   BCT 02-MAR-2025
DEFINITION  SRPBCC family protein [Saccharopolyspora terrae].
ACCESSION   WP_235876818
VERSION     WP_235876818.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora terrae
  ORGANISM  Saccharopolyspora terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 161)
  AUTHORS   Iyer,L.M., Koonin,E.V. and Aravind,L.
  TITLE     Adaptations of the helix-grip fold for ligand binding and catalysis
            in the START domain superfamily
  JOURNAL   Proteins 43 (2), 134-144 (2001)
   PUBMED   11276083
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10604.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Saccharopolyspora terrae"
                     /db_xref="taxon:2530384"
     Protein         1..161
                     /product="SRPBCC family protein"
                     /calculated_mol_wt=17664
     Region          5..157
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(6,8,10,19..21,23..24,35,46,48,50,52,72,74,76,80,82,
                     106..107,109,111,118,120,122,124,137..141,143..144,
                     147..149,152)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176854"
ORIGIN      
        1 mnqenvsatr tiaapaegvf avladptthp tidgtgwvqe pvdrarlaev gqifrmdmyh
       61 pdaqngdyqv aneihvidpp rtigwrtgyd pkgdgrlefg gwswrydlvp lgpsttavtl
      121 tydwsavpqs vrdclhfppf gpdhlanslr hlaelareta a
//
LOCUS       WP_235876834             596 aa            linear   BCT 02-MAR-2025
DEFINITION  PEP-utilizing enzyme [Saccharopolyspora terrae].
ACCESSION   WP_235876834
VERSION     WP_235876834.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora terrae
  ORGANISM  Saccharopolyspora terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 596)
  AUTHORS   Herzberg,O., Chen,C.C., Kapadia,G., McGuire,M., Carroll,L.J.,
            Noh,S.J. and Dunaway-Mariano,D.
  TITLE     Swiveling-domain mechanism for enzymatic phosphotransfer between
            remote reaction sites
  JOURNAL   Proc Natl Acad Sci U S A 93 (7), 2652-2657 (1996)
   PUBMED   8610096
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012609.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00391.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Saccharopolyspora terrae"
                     /db_xref="taxon:2530384"
     Protein         1..596
                     /product="PEP-utilizing enzyme"
                     /GO_function="GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA]"
                     /GO_process="GO:0016310 - phosphorylation [Evidence IEA]"
                     /calculated_mol_wt=65366
     Region          <5..593
                     /region_name="PRK06241"
                     /note="phosphoenolpyruvate synthase; Validated"
                     /db_xref="CDD:235751"
ORIGIN      
        1 mqesfgspqd iewaldrdge lwllqsrait tlfplpprtd dlrvyfemgh mqgmlrpftp
       61 agmsamthga klwmdsagls ggafgdamgi vpvggrlfmd fsdllrnkrf rsrlpqmmev
      121 ygprnveivq rlltdprfap ttgglpfpva pllkkslvvv pkakfelirt linpdaarer
      181 afrateklkr qarapefans qqrlrfaeev qrdfmtasev iwplfigill gqlpksllkg
      241 vattseldtv lgglphnvtt emdlalwrlt tglddearel lrstppaelt dryragelpd
      301 iglddflary ghrapaevdv gmprwsedpa qifatiagyl ritdpeqapd rrfeksaara
      361 eamidelfqr arrerpvrah larflmrrar kltglrelgk fawlyslqav rdqllrigdd
      421 lsrrgllarp gdvlflelde iraavggsdq salaaerkar ydrevrrrav piavlsdgtd
      481 leatappapa adgalvglga spgkvtgpar vvhdpatari epgeilvatt tdpgwtplfm
      541 taaglvtetg spmahgptva reygipavic vrdatteitt gqiitvdats gtvtpg
//
LOCUS       WP_235876837             401 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Saccharopolyspora terrae].
ACCESSION   WP_235876837
VERSION     WP_235876837.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora terrae
  ORGANISM  Saccharopolyspora terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 401)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Saccharopolyspora terrae"
                     /db_xref="taxon:2530384"
     Protein         1..401
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=42248
     Region          53..>282
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mgltsgaghs rraflsasag itgavvltgt agaadlrpvg ggalppgdpi spqepdarlr
       61 allaqvderr iedvvrklvs fgtrhtlssq ddpqrgigaa rdwlfaemqa caarsggrmt
      121 velqsydqep anripvttri tnvvatirgt tdpdrahvvs ghydsratdv mdavsdapga
      181 dddasgvavv lelarllaee piestvvlaa vaaeeqglyg anhmaelfaa dgvdvramft
      241 ddivgasrad dgtsdprtir lfaegvptse tpeeaetrrs vgartirrra sspassptsp
      301 ptprrgwmfe sstdetasca avitsrssrr airqrgspsr trtsgtstrt carravsatg
      361 tcrssatsat spasprstwr rsgrwrrgra rppawscapr t
//
LOCUS       WP_235876905             246 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6474 family protein [Saccharopolyspora terrae].
ACCESSION   WP_235876905
VERSION     WP_235876905.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora terrae
  ORGANISM  Saccharopolyspora terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040114.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20079.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Saccharopolyspora terrae"
                     /db_xref="taxon:2530384"
     Protein         1..246
                     /product="DUF6474 family protein"
                     /calculated_mol_wt=26287
     Region          <92..244
                     /region_name="DUF6474"
                     /note="Family of unknown function (DUF6474); pfam20079"
                     /db_xref="CDD:466283"
ORIGIN      
        1 mrklarrrgk itqgaqrgcr kcavkktkae nkarrqvdka arkaaarsea aekkaaaqsv
       61 paqqvdpatp ppltsapvgk kaakallkad kqtakaikkg efgtvtpgna kkivgiakiv
      121 gplllpfalr avstvresyd rsrarklgvp vddlgkftgh gaslhariag dsvalrdlre
      181 qstgeergha rtyadqaear laqltsavra aermpsprrr sahravdqel srieselltr
      241 fgvptg
//
LOCUS       WP_235876959             131 aa            linear   BCT 02-MAR-2025
DEFINITION  Rv3235 family protein [Saccharopolyspora terrae].
ACCESSION   WP_235876959
VERSION     WP_235876959.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora terrae
  ORGANISM  Saccharopolyspora terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039460.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20060.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Saccharopolyspora terrae"
                     /db_xref="taxon:2530384"
     Protein         1..131
                     /product="Rv3235 family protein"
                     /calculated_mol_wt=13924
     Region          22..123
                     /region_name="DUF6459"
                     /note="Family of unknown function (DUF6459); pfam20060"
                     /db_xref="CDD:466277"
ORIGIN      
        1 mtavqpstal lprtdppqpa ipdpaqrtav svasviggqv fdvlagrsga knvrehltaa
       61 vfgnllglrl rgahhpeyrl rsvhacaigd saveaclvvg ahriralalr lerraerwvc
      121 trlspiersa i
//
LOCUS       WP_235876806             240 aa            linear   BCT 02-MAR-2025
DEFINITION  acetoacetate decarboxylase family protein [Saccharopolyspora
            terrae].
ACCESSION   WP_235876806
VERSION     WP_235876806.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora terrae
  ORGANISM  Saccharopolyspora terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 240)
  AUTHORS   Gerischer,U. and Durre,P.
  TITLE     Cloning, sequencing, and molecular analysis of the acetoacetate
            decarboxylase gene region from Clostridium acetobutylicum
  JOURNAL   J Bacteriol 172 (12), 6907-6918 (1990)
   PUBMED   2254264
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018066.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06314.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Saccharopolyspora terrae"
                     /db_xref="taxon:2530384"
     Protein         1..240
                     /product="acetoacetate decarboxylase family protein"
                     /GO_function="GO:0016829 - lyase activity [Evidence IEA]"
                     /calculated_mol_wt=26150
     Region          27..213
                     /region_name="ADC"
                     /note="Acetoacetate decarboxylase (ADC); cl01919"
                     /db_xref="CDD:445607"
ORIGIN      
        1 mhekpltnsv hvvqgervhm pvevraatgi taqflvpagp ardtlaaagl epvtpipgrv
       61 patlgfihyl dcdlgeyhef lvalmcrqpg vrgstgvfih wlpvdqtftc eagqniwgfp
      121 keistidvst rgkrtrcevr ledrpvvale fgrgvpapsa mgamtldayt hrdgvlrrtp
      181 wtmraggtrm rpggarvelg dhpisddlrr lglprkalft nhigeltmrf adatpissrs
//
LOCUS       WP_235877066              54 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Saccharopolyspora
            terrae].
ACCESSION   WP_235877066
VERSION     WP_235877066.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora terrae
  ORGANISM  Saccharopolyspora terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 54)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 54)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..54
                     /organism="Saccharopolyspora terrae"
                     /db_xref="taxon:2530384"
     Protein         1..54
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=5212
     Region          7..>47
                     /region_name="PRK06500"
                     /note="SDR family oxidoreductase"
                     /db_xref="CDD:235816"
ORIGIN      
        1 mvdystknav itggasgmgf slakllvdgg arvaitgrsq asldaarngs aatr
//
LOCUS       WP_235877044             265 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Saccharopolyspora terrae].
ACCESSION   WP_235877044
VERSION     WP_235877044.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora terrae
  ORGANISM  Saccharopolyspora terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Saccharopolyspora terrae"
                     /db_xref="taxon:2530384"
     Protein         1..265
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=27062
     Region          4..263
                     /region_name="PRK07814"
                     /note="SDR family oxidoreductase"
                     /db_xref="CDD:181131"
ORIGIN      
        1 matlplfrld grvalvsgag rgigaatala laeagadvav lsrtpdqiea vaqqirelgr
       61 ravaiptdag daeavagava rvaeelgrid vvvsvtggsm prpftnthde alrksfennv
      121 vhgvrlvrea vphlaksdaa svvmvssstg hlvgrgylay gaakasldha vrmmaadlnp
      181 rirvnavapg ailtealevv aaapemkatl eghtplrrig vpediaaail ylsspsssyv
      241 tgqvlavdgg lvapnmplpi pdvea
//
LOCUS       WP_235876992             259 aa            linear   BCT 02-MAR-2025
DEFINITION  Rossmann-like domain-containing protein [Saccharopolyspora terrae].
ACCESSION   WP_235876992
VERSION     WP_235876992.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora terrae
  ORGANISM  Saccharopolyspora terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 259)
  AUTHORS   Miller,M.D., Aravind,L., Bakolitsa,C., Rife,C.L., Carlton,D.,
            Abdubek,P., Astakhova,T., Axelrod,H.L., Chiu,H.J., Clayton,T.,
            Deller,M.C., Duan,L., Feuerhelm,J., Grant,J.C., Han,G.W.,
            Jaroszewski,L., Jin,K.K., Klock,H.E., Knuth,M.W., Kozbial,P.,
            Krishna,S.S., Kumar,A., Marciano,D., McMullan,D., Morse,A.T.,
            Nigoghossian,E., Okach,L., Reyes,R., van den Bedem,H., Weekes,D.,
            Xu,Q., Hodgson,K.O., Wooley,J., Elsliger,M.A., Deacon,A.M.,
            Godzik,A., Lesley,S.A. and Wilson,I.A.
  TITLE     Structure of the first representative of Pfam family PF04016
            (DUF364) reveals enolase and Rossmann-like folds that combine to
            form a unique active site with a possible role in heavy-metal
            chelation
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 66 (Pt 10),
            1167-1173 (2010)
   PUBMED   20944207
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015949.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04016.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Saccharopolyspora terrae"
                     /db_xref="taxon:2530384"
     Protein         1..259
                     /product="Rossmann-like domain-containing protein"
                     /calculated_mol_wt=28030
ORIGIN      
        1 mtalddliet alpeadseis vgfltqqgvr hasrqrsyrn hvlslrvgea vgscavepge
       61 vgedvvlacv gepvrkllrh plpavriaal dahlqhlrph hehaeavhve rgdslrkslh
      121 rsehvvnllp sgvrrvlvvg vvnsllqrlr ergigyvacd rkggrtewde pvitdaenal
      181 ddcdavlasg mvlgsgtfht lldharrtgq plvffaqtgs gilphflgdg vtavsaepyp
      241 ffwldggpsv lyrysevas
//
LOCUS       WP_235877078             352 aa            linear   BCT 02-MAR-2025
DEFINITION  Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing
            protein [Saccharopolyspora terrae].
ACCESSION   WP_235877078
VERSION     WP_235877078.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora terrae
  ORGANISM  Saccharopolyspora terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 352)
  AUTHORS   Baker,P.J., Turnbull,A.P., Sedelnikova,S.E., Stillman,T.J. and
            Rice,D.W.
  TITLE     A role for quaternary structure in the substrate specificity of
            leucine dehydrogenase
  JOURNAL   Structure 3 (7), 693-705 (1995)
   PUBMED   8591046
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014827.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02812.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Saccharopolyspora terrae"
                     /db_xref="taxon:2530384"
     Protein         1..352
                     /product="Glu/Leu/Phe/Val dehydrogenase dimerization
                     domain-containing protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=36302
     Region          15..132
                     /region_name="ELFV_dehydrog_N"
                     /note="Glu/Leu/Phe/Val dehydrogenase, dimerization domain;
                     pfam02812"
                     /db_xref="CDD:460706"
     Region          153..335
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(187..189,208..209,240..241,262)
                     /site_type="other"
                     /note="NAD(P) binding pocket [chemical binding]"
                     /db_xref="CDD:133449"
ORIGIN      
        1 msrsysspea ldheqlrvvr grrsgvviav avhstqagpa iggcrikpyp gwrdgvddvv
       61 rlaramteka alaglrhggg kavimdadav lderhrllvl edlaevitsl dgayltgpdi
      121 gsapadmeii hrltgglafc rpessggsgn ssiatahgvl aaleaavdhv fgtgalaglr
      181 vgvigygsvg rlvadelaar gcavttgdld esrrataeaa gltwsaedll geefdvlvpa
      241 avggllseer artcragliv gpannqlthd dvastlherg itwvpdvvas aggiihavcr
      301 eelglteeet tpriraigtt vteiltgard sgttpqaaar dlaarrrtav pa
//
LOCUS       WP_235876420             323 aa            linear   BCT 02-MAR-2025
DEFINITION  HAMP domain-containing sensor histidine kinase [Saccharopolyspora
            terrae].
ACCESSION   WP_235876420
VERSION     WP_235876420.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora terrae
  ORGANISM  Saccharopolyspora terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 323)
  AUTHORS   Adam,K. and Hunter,T.
  TITLE     Histidine kinases and the missing phosphoproteome from prokaryotes
            to eukaryotes
  JOURNAL   Lab Invest 98 (2), 233-247 (2018)
   PUBMED   29058706
REFERENCE   2  (residues 1 to 323)
  AUTHORS   Ortet,P., Whitworth,D.E., Santaella,C., Achouak,W. and Barakat,M.
  TITLE     P2CS: updates of the prokaryotic two-component systems database
  JOURNAL   Nucleic Acids Res 43 (Database issue), D536-D541 (2015)
   PUBMED   25324303
REFERENCE   3  (residues 1 to 323)
  AUTHORS   Attwood,P.V.
  TITLE     Histidine kinases from bacteria to humans
  JOURNAL   Biochem Soc Trans 41 (4), 1023-1028 (2013)
   PUBMED   23863173
REFERENCE   4  (residues 1 to 323)
  AUTHORS   Dunin-Horkawicz,S. and Lupas,A.N.
  TITLE     Comprehensive analysis of HAMP domains: implications for
            transmembrane signal transduction
  JOURNAL   J Mol Biol 397 (5), 1156-1174 (2010)
   PUBMED   20184894
REFERENCE   5  (residues 1 to 323)
  AUTHORS   Hulko,M., Berndt,F., Gruber,M., Linder,J.U., Truffault,V.,
            Schultz,A., Martin,J., Schultz,J.E., Lupas,A.N. and Coles,M.
  TITLE     The HAMP domain structure implies helix rotation in transmembrane
            signaling
  JOURNAL   Cell 126 (5), 929-940 (2006)
   PUBMED   16959572
REFERENCE   6  (residues 1 to 323)
  AUTHORS   Dutta,R. and Inouye,M.
  TITLE     GHKL, an emergent ATPase/kinase superfamily
  JOURNAL   Trends Biochem Sci 25 (1), 24-28 (2000)
   PUBMED   10637609
REFERENCE   7  (residues 1 to 323)
  AUTHORS   Stock,A.M., Robinson,V.L. and Goudreau,P.N.
  TITLE     Two-component signal transduction
  JOURNAL   Annu Rev Biochem 69, 183-215 (2000)
   PUBMED   10966457
REFERENCE   8  (residues 1 to 323)
  AUTHORS   Stock,J.
  TITLE     Signal transduction: Gyrating protein kinases
  JOURNAL   Curr Biol 9 (10), R364-R367 (1999)
   PUBMED   10339418
REFERENCE   9  (residues 1 to 323)
  AUTHORS   Alex,L.A. and Simon,M.I.
  TITLE     Protein histidine kinases and signal transduction in prokaryotes
            and eukaryotes
  JOURNAL   Trends Genet 10 (4), 133-138 (1994)
   PUBMED   8029829
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 12201496
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Saccharopolyspora terrae"
                     /db_xref="taxon:2530384"
     Protein         1..323
                     /product="HAMP domain-containing sensor histidine kinase"
                     /EC_number="2.7.13.3"
                     /GO_function="GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=34572
     Region          70..113
                     /region_name="HAMP"
                     /note="HAMP (Histidine kinases, Adenylyl cyclases, Methyl
                     binding proteins, Phosphatases) domain; smart00304"
                     /db_xref="CDD:197640"
     Region          96..317
                     /region_name="ComP"
                     /note="Signal transduction histidine kinase ComP [Signal
                     transduction mechanisms]; COG4585"
                     /db_xref="CDD:443642"
ORIGIN      
        1 mgvqevrdvs lfwrvfllna avltgatvll vlspatvstp vlpaeglilv aglvamlvan
       61 avllrigflp lrrltramtt idllrpgsrp pvsghggiad limafnamld rleferatsn
      121 aralsaqeae rrriarelhd eigqsltavl lelrrvadea peavsdalhq vqettrdsld
      181 eirriarrlr pgvleelgla salksltgev hgvaarcrie gelpelgeev elviyrvaqe
      241 sitnavrhsg atrihllvqv epsevrlrvr dngagigdsp egagirgmre rallagatla
      301 vepvaeggte vrldvpintg ggr
//
LOCUS       WP_235877113             161 aa            linear   BCT 02-MAR-2025
DEFINITION  tripartite tricarboxylate transporter TctB family protein
            [Saccharopolyspora terrae].
ACCESSION   WP_235877113
VERSION     WP_235877113.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora terrae
  ORGANISM  Saccharopolyspora terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018979.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07331.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Saccharopolyspora terrae"
                     /db_xref="taxon:2530384"
     Protein         1..161
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /calculated_mol_wt=16560
ORIGIN      
        1 msgdraqvwm liglvvlgag fafsapvygv fgeqgrigpg fvpmvaggll avlaavllrr
       61 qlsqpvsage vqsgtddfgr tagqrawilr rvfvllpvtv lavpvvgmvc afgglvlvis
      121 twlegrrvlp avafsvavag gvwvvfavll avplptgifg f
//
LOCUS       WP_235877128             291 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-binding protein [Saccharopolyspora terrae].
ACCESSION   WP_235877128
VERSION     WP_235877128.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora terrae
  ORGANISM  Saccharopolyspora terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13460.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Saccharopolyspora terrae"
                     /db_xref="taxon:2530384"
     Protein         1..291
                     /product="NAD(P)H-binding protein"
                     /calculated_mol_wt=29882
     Region          1..>267
                     /region_name="COG3268"
                     /note="Uncharacterized conserved protein, related to
                     short-chain dehydrogenases [Function unknown]"
                     /db_xref="CDD:442499"
ORIGIN      
        1 meskvwvlgg tgragrevaa qlaergvhpv lvgrnaarlt evaarvpgat tvvaasadem
       61 aerirqarpd vvintvgpfa etapplvrac lptshyvdla ndvealsall dlgeeaaaad
      121 rtlvsgagfg vaatesvvvk lcegrppaaa vrvdmvpslg meegkvgeal aatlvdglas
      181 pgrgqgelaa arlgdelmtl tlpdgtqvkt aslplgelva ahrasgaqsv vsasseapts
      241 pavraflplg vavlriqvvr tfakrrlaqv rvkarerpre hswgtrpgpm g
//
LOCUS       WP_235877139             262 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Saccharopolyspora
            terrae].
ACCESSION   WP_235877139
VERSION     WP_235877139.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora terrae
  ORGANISM  Saccharopolyspora terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 262)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 262)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Saccharopolyspora terrae"
                     /db_xref="taxon:2530384"
     Protein         1..262
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=26759
     Region          20..254
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(123,151,164,168)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 magvegrvvv vtgaggglge ayaqllageg akvvvndlgg ardgtgsgts maddvvakir
       61 agggeavany dsvataegaa gvvrtaldhf gqvdgvvnna gilrdkafhk mtdteweavm
      121 qvhlfggfhv traawphfre qgrgrvvmaa stsgiygnfg qanygaakag liglvntlai
      181 egrkygilan avapmaatrm tedvappell sklspahvap vvahllsdec tdtgsvivag
      241 ggqvhrtqyf qskgvqrrah gr
//
LOCUS       WP_235877238             709 aa            linear   BCT 02-MAR-2025
DEFINITION  prolyl oligopeptidase family serine peptidase [Flavobacterium
            davisii].
ACCESSION   WP_235877238
VERSION     WP_235877238.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012546.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00326.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..709
                     /product="prolyl oligopeptidase family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=81575
     Region          35..701
                     /region_name="PreP"
                     /note="Prolyl endopeptidase PreP, S9A serine peptidase
                     family [Amino acid transport and metabolism]; COG1505"
                     /db_xref="CDD:441114"
ORIGIN      
        1 mkkiylaflf nislvfsqnc tiqknsiqeq yfnikitdey rsleklddst tnwlkcqnen
       61 sknvlsqiks kdslsktfye rvkarkdqtf yltfknndhy ffckkrvgen yaklflknqq
      121 keeiliydpk nykpelgkqf visfyqpnnk gdkiaialte ggkevsdmii ydlathtlls
      181 dvienswpse mggiswlpdd sgfiytkmas nnnndpdfll nsksclhlln sqgkdkvifs
      241 risnpeiniq kedfpivqik edyligflgg pteykdcyyt sleklnekkl dwkplfkkee
      301 kvtpnyfvkg mniffmvnnk eiliqslndn enskkklvvt tkkeeylnsi lptkegfyys
      361 tlkngieakl yfyngkkske iilpfkagdi slenidatks elwvycsgwt qrtkifkydl
      421 ktntfteeki neentkyndl vveeieikth dgllmpisii rqknikkdkk trtiidsyga
      481 ygsigaptys enmlewvyng gmyvyahvrg ggekgddwhk ggykqtkpns wkdliscaey
      541 liekkytspk hlgvlgvsag gitvgrgite rpdlfkaavi kvgilnplrl ettpngannv
      601 kefgttkiee efkalyemdp ylhlqpntny patlltagmn darvlywqpa kfvakmqvcq
      661 knnnpvlfrv nmdgghgsgv tvnksleeni dvytffywql ghpdfqvkk
//
LOCUS       WP_235877156             220 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Saccharopolyspora terrae].
ACCESSION   WP_235877156
VERSION     WP_235877156.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora terrae
  ORGANISM  Saccharopolyspora terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 220)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Saccharopolyspora terrae"
                     /db_xref="taxon:2530384"
     Protein         1..>220
                     /product="AMP-binding protein"
     Region          7..>220
                     /region_name="PRK08315"
                     /note="AMP-binding domain protein; Validated"
                     /db_xref="CDD:236236"
ORIGIN      
        1 mgteptllsy dsgastvpll gdtigtnldr taarfperda lvevatgrrw tyrefvadvd
       61 amatglldag itkgdrvgvw apnrsewtlt qyatakigai lvninpayrs heleyvlnqa
      121 gvrmlisaks fkssdyvamv eevrskcagl eqivflespe wanlvgaaad qrrlgeirls
      181 addainiqyt sgttgfpkga tlshhnilnn gffvgelcgy
//
LOCUS       WP_235877338             327 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2157 domain-containing protein [Flavobacterium davisii].
ACCESSION   WP_235877338
VERSION     WP_235877338.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021446.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09925.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..327
                     /product="DUF2157 domain-containing protein"
                     /calculated_mol_wt=38163
ORIGIN      
        1 mttifdllft kkfikeaqyk aikeysklvv fsirnellfl iylsilffts gigiiiykni
       61 dtighillll llgiittisc yfsytkskgf skeevfyenp lydylvlftt ilictlisyf
      121 qynfhikend ysittlicgi islgiayyfd nkkaliisit algsfvgltl kiqnileynf
      181 lndkhlllsg lvfgtlliiw qyyseknklk lhfslviltf alhllfltcl igivqeknwi
      241 lyslilglvt yyfyikslqy itisgyiftl fysyiglnii ffkviyeydl hiitefltsv
      301 mpfyvvgsii ffikqirdfk kkiyasq
//
LOCUS       WP_235877248             392 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Flavobacterium davisii].
ACCESSION   WP_235877248
VERSION     WP_235877248.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..392
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=44013
     Region          2..381
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mklavitsfp pskvtlneyg yhlvknfvqk edvtelilmc dktsekktld fdnsqkvkin
       61 ecwsfnsygi ifticktali tkpdailfnl qfvkfgdkki paalglllpf ilrllgfktm
      121 vlmhnileqv dlntagftkn kimqciynli gtsltyfilk ankisvtink yvdilkskyk
      181 vsnvvliphg sfetvskpnf dlllgpkkvm afgkfgtykk veilieavqk ikqhytepie
      241 iviagtdspn tpgylesvqk kyahvkglvf tgyveekdve kiftestviv fpytsttgss
      301 gvlhqagsyg kavvmpnlgd lallveeegy kgaffdsdsv eslaqaiyki lhdddyrrel
      361 aytnytvana ltmdkiadky lheinllinn my
//
LOCUS       WP_235877372             483 aa            linear   BCT 02-MAR-2025
DEFINITION  T6SS effector amidase Tae4 family protein [Flavobacterium davisii].
ACCESSION   WP_235877372
VERSION     WP_235877372.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 483)
  AUTHORS   Zhang,H., Zhang,H., Gao,Z.Q., Wang,W.J., Liu,G.F., Xu,J.H., Su,X.D.
            and Dong,Y.H.
  TITLE     Structure of the type VI effector-immunity complex (Tae4-Tai4)
            provides novel insights into the inhibition mechanism of the
            effector by its immunity protein
  JOURNAL   J Biol Chem 288 (8), 5928-5939 (2013)
   PUBMED   23288853
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025478.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14113.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..483
                     /product="T6SS effector amidase Tae4 family protein"
                     /calculated_mol_wt=52360
     Region          <50..230
                     /region_name="RhsA"
                     /note="Uncharacterized conserved protein RhaS, contains 28
                     RHS repeats [General function prediction only]; COG3209"
                     /db_xref="CDD:442442"
     Region          <160..309
                     /region_name="PHO4"
                     /note="Phosphate transporter family; cl27575"
                     /db_xref="CDD:474944"
     Region          380..480
                     /region_name="Tae4"
                     /note="Type VI secretion system (T6SS), amidase effector
                     protein 4; pfam14113"
                     /db_xref="CDD:433727"
ORIGIN      
        1 mlqapthkie qlnikattrk vvafgfkpye snivyvknya eidakplflh kdylgtilai
       61 tdekgklvee ryfdawgnlt hgsmqvldrg ytshehlqdv glihmngrly dpmlrrflna
      121 deniqdptnt qcynkygyvm nnplmfndps geygiaitit igvivaalty tanvyfkygn
      181 lkywniyeah eamfwgavsa aatygvgtlf saggtivnti gevwsvaaqa aahgivqgvl
      241 ssvqggnfws aalsgafgsl gasafgaigg dfakstvgti tfgaisggvg aelsggnfwq
      301 gvviggmvag lnhaahamik pkttlteadi kkiydaypsg dtsdpnfvhr ddvykniggd
      361 iyndyllhgy dsngnpnpay antcalrlst alnksgytip ktngtfsgan klnyfykvdk
      421 iqvylskiyn fsqaslgmqi qnsiiiqknc gwsdatghvd vlyggragsh fyqectttfy
      481 ssk
//
LOCUS       WP_235877461             105 aa            linear   BCT 02-MAR-2025
DEFINITION  nitrous oxide reductase accessory protein NosL [Flavobacterium
            davisii].
ACCESSION   WP_235877461
VERSION     WP_235877461.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 105)
  AUTHORS   McGuirl,M.A., Bollinger,J.A., Cosper,N., Scott,R.A. and Dooley,D.M.
  TITLE     Expression, purification, and characterization of NosL, a novel
            Cu(I) protein of the nitrous oxide reductase (nos) gene cluster
  JOURNAL   J Biol Inorg Chem 6 (2), 189-195 (2001)
   PUBMED   11293413
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017394.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05573.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..105
                     /product="nitrous oxide reductase accessory protein NosL"
                     /calculated_mol_wt=12234
     Region          <1..100
                     /region_name="NosL"
                     /note="cl01769"
                     /db_xref="CDD:470335"
ORIGIN      
        1 miisspqfsn eiitnkgrcy kfddlsclfq ylnetdikik kiyvsdysnn nmisaetaff
       61 ikhedfkspm ngniacfsnl kkskkyqekc htvilnwnel aqlyr
//
LOCUS       WP_235877470             311 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Saccharopolyspora karakumensis].
ACCESSION   WP_235877470
VERSION     WP_235877470.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora karakumensis
  ORGANISM  Saccharopolyspora karakumensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025912.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Saccharopolyspora karakumensis"
                     /db_xref="taxon:2530386"
     Protein         1..311
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=33125
     Region          43..149
                     /region_name="CnoX"
                     /note="Chaperedoxin CnoX, contains thioredoxin-like and
                     TPR-like domains, YbbN/TrxSC family [Posttranslational
                     modification, protein turnover, chaperones]; COG3118"
                     /db_xref="CDD:442352"
     Region          135..>272
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          179..203
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276808"
     Region          224..311
                     /region_name="TPR_20"
                     /note="Tetratricopeptide repeat; pfam14561"
                     /db_xref="CDD:434039"
     Region          242..273
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276808"
     Region          278..310
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276808"
ORIGIN      
        1 msaamagavd lsalksraea aanstaqpps gggdgaagqa hpaiievtet dfqaevvers
       61 mqvpvvvdlw atwcepckql spaleklare gngawvlaki dvdanpriaq lfqvqsvpmv
      121 iavaggqpvd gfagaqpepq lrewisslln alrdqlpgir aaeegaseae peeepedprf
      181 iaaedaleqg dfaaaetayq qildsepnne qakaalmqvr fmaraeqadp saieradnap
      241 ddldaqiaaa daevafgkvd egftrliqav krtsgddrnr vrthlvemfe ifpegderva
      301 karrnlasal f
//
LOCUS       WP_235877497             242 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Saccharopolyspora karakumensis].
ACCESSION   WP_235877497
VERSION     WP_235877497.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora karakumensis
  ORGANISM  Saccharopolyspora karakumensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Saccharopolyspora karakumensis"
                     /db_xref="taxon:2530386"
     Protein         1..242
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=25402
     Region          <2..229
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mpfllslvlv gvglyvrlrl aespefaair qrgerarlpv aeafatawrq illaagvnlg
       61 fnafifimtt flltygtekv gvtrdvmllg sfagsaaqia gillfshlsd rlgrtqvmlg
      121 ggtflaafaf plfwlidtgs palivlamiv gyggaaavfg pmaafcaelf ptrvrytgvs
      181 lgyqsgsvlg gglspvvata lltgsggqsw pisaylvfga aitivclalt geptrwsrrd
      241 ek
//
LOCUS       WP_235877507             546 aa            linear   BCT 02-MAR-2025
DEFINITION  SWIM zinc finger family protein [Flavobacterium davisii].
ACCESSION   WP_235877507
VERSION     WP_235877507.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 546)
  AUTHORS   Makarova,K.S., Aravind,L. and Koonin,E.V.
  TITLE     SWIM, a novel Zn-chelating domain present in bacteria, archaea and
            eukaryotes
  JOURNAL   Trends Biochem Sci 27 (8), 384-386 (2002)
   PUBMED   12151216
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016330.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04434.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..546
                     /product="SWIM zinc finger family protein"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=64745
     Region          23..>147
                     /region_name="SWIM"
                     /note="Uncharacterized protein, contains SWIM-type Zn
                     finger domain [Function unknown]; COG4715"
                     /db_xref="CDD:443750"
ORIGIN      
        1 mstltaflke nntklkeikk ltvrdldqle pnlfvayvdq kdksydvqir lnskkqiett
       61 scdcsdgaic ihmvaladfl knqtkttets kkrilkkqse sdqlleaisd ldlriwiadl
      121 lntnkeiafv fknkfskeei qiseekltav inesiksiig krktvqtnev kkiidtlqis
      181 lkpytdallq nqtlenlkhi nyiakelwqf yddyylnttr igtfinkike tfitnllllk
      241 dfdlwcerve dliafeitde khthffytdk iykfsktnel klafflnkle ektkpflekk
      301 enwslenfhl kafvlpiyie qgmfakyvki fkpvkfqndy nllliqalke lgenekveky
      361 aldqiannyy yeefnipyvk ildelyrkle qndklallla rhgkyifsln nyelikkyap
      421 sedfkkyrqa lltnatnaiv sgnleafely yqlkkdegkq dflfdilnkt nsytifnqyk
      481 edafkmsemk flkalcnirn sslyekkevn eivqfitkny dekqlefylk qfrgfnevlk
      541 vlwkny
//
LOCUS       WP_235877508             167 aa            linear   BCT 02-MAR-2025
DEFINITION  endonuclease V [Flavobacterium davisii].
ACCESSION   WP_235877508
VERSION     WP_235877508.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 167)
  AUTHORS   Guo,G., Ding,Y. and Weiss,B.
  TITLE     nfi, the gene for endonuclease V in Escherichia coli K-12
  JOURNAL   J Bacteriol 179 (2), 310-316 (1997)
   PUBMED   8990280
REFERENCE   2  (residues 1 to 167)
  AUTHORS   Demple,B., Gates,F.T. 3rd and Linn,S.
  TITLE     Purification and properties of Escherichia coli
            endodeoxyribonuclease V
  JOURNAL   Methods Enzymol 65 (1), 224-231 (1980)
   PUBMED   6246346
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04493.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..167
                     /product="endonuclease V"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_process="GO:0006281 - DNA repair [Evidence IEA]"
                     /calculated_mol_wt=18882
ORIGIN      
        1 milaidvyyi neiaksvgvl fdwkdihpqe viidikegva eyvprefykr elpcieallk
       61 kiplekikii iidghiyvdd slkyglggyv wellekkipi igvaknafhs ntstvvplyr
      121 geskkplyvs aigmeiteav ahlqnmqgdf ripsilkeld titknqn
//
LOCUS       WP_235877526             417 aa            linear   BCT 02-MAR-2025
DEFINITION  PAS domain-containing protein [Flavobacterium davisii].
ACCESSION   WP_235877526
VERSION     WP_235877526.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 417)
  AUTHORS   Hefti,M.H., Francoijs,K.J., de Vries,S.C., Dixon,R. and Vervoort,J.
  TITLE     The PAS fold. A redefinition of the PAS domain based upon
            structural prediction
  JOURNAL   Eur J Biochem 271 (6), 1198-1208 (2004)
   PUBMED   15009198
REFERENCE   2  (residues 1 to 417)
  AUTHORS   Ponting,C.P. and Aravind,L.
  TITLE     PAS: a multifunctional domain family comes to light
  JOURNAL   Curr Biol 7 (11), R674-R677 (1997)
   PUBMED   9382818
REFERENCE   3  (residues 1 to 417)
  AUTHORS   Zhulin,I.B., Taylor,B.L. and Dixon,R.
  TITLE     PAS domain S-boxes in Archaea, Bacteria and sensors for oxygen and
            redox
  JOURNAL   Trends Biochem Sci 22 (9), 331-333 (1997)
   PUBMED   9301332
REFERENCE   4  (residues 1 to 417)
  AUTHORS   Borgstahl,G.E., Williams,D.R. and Getzoff,E.D.
  TITLE     1.4 A structure of photoactive yellow protein, a cytosolic
            photoreceptor: unusual fold, active site, and chromophore
  JOURNAL   Biochemistry 34 (19), 6278-6287 (1995)
   PUBMED   7756254
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020036.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08447.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..417
                     /product="PAS domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=48359
     Region          <60..>132
                     /region_name="PRK09776"
                     /note="putative diguanylate cyclase; Provisional"
                     /db_xref="CDD:182070"
     Region          <105..410
                     /region_name="COG4251"
                     /note="Bacteriophytochrome (light-regulated signal
                     transduction histidine kinase) [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443393"
     Region          161..252
                     /region_name="PAS_3"
                     /note="PAS fold; pfam08447"
                     /db_xref="CDD:430001"
     Site            order(164,168,174,191..194,221,225)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(188,192,201,204..205,232,234)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
ORIGIN      
        1 mqlgssehff lnkiisnqsl lffqfsvdld gflivdylqg shydffesdi emfrsnplgv
       61 fkkvvfpldk srilnaidks rkdlasldld frvvlskelr wykmlataes esdkvsffgi
      121 isditkqkki eeekriealr nqfanqasei gvwdwnlvtn evfysaqslk ileiskgnlg
      181 lisnpeewdk lvhpddreiy fyniqehlee ripyyetyhr vlcngvykwi ldrgkvierd
      241 algkplriig thtdvtiqke keqklretfd lvnnqkgklm nfahivshnl kshtenfyml
      301 lsfykngyvs teevikslqi vynelkgtid nlvdlvgvqa evinekqsnn lrcyieksls
      361 vlkemicake ititlevdkg mevsfipayl esvilnlttn avkyadsnkk insfrfi
//
LOCUS       WP_235877634             135 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4326 domain-containing protein [Saccharopolyspora karakumensis].
ACCESSION   WP_235877634
VERSION     WP_235877634.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora karakumensis
  ORGANISM  Saccharopolyspora karakumensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025577.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14216.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Saccharopolyspora karakumensis"
                     /db_xref="taxon:2530386"
     Protein         1..135
                     /product="DUF4326 domain-containing protein"
                     /calculated_mol_wt=15202
     Region          70..131
                     /region_name="DUF4326"
                     /note="Domain of unknown function (DUF4326); pfam14216"
                     /db_xref="CDD:433779"
ORIGIN      
        1 meaevvrvlp eeascwsdde reradalldg havvvnvrkd gphkhlvpwl leqdlvtyvg
       61 hsgprhswpq sefaspfvse aktdreamvr hyeqwldgrp dllerlrege lagralgcwc
      121 apkpchadvl ahrah
//
LOCUS       WP_235877528              78 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Flavobacterium davisii].
ACCESSION   WP_235877528
VERSION     WP_235877528.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 78)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 78)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 78)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 78)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..78
                     /product="ATP-binding protein"
                     /calculated_mol_wt=8600
     Region          <6..78
                     /region_name="COG4251"
                     /note="Bacteriophytochrome (light-regulated signal
                     transduction histidine kinase) [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443393"
ORIGIN      
        1 mlhnveydvl cvedngigid lkkyqeavfg pyktfhknre stgiglyiak nqveamggki
       61 svdsklgigs vfkvyfkk
//
LOCUS       WP_235877674            1722 aa            linear   BCT 02-MAR-2025
DEFINITION  SdrD B-like domain-containing protein [Flavobacterium davisii].
ACCESSION   WP_235877674
VERSION     WP_235877674.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028519.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17210.9
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1722
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..1722
                     /product="SdrD B-like domain-containing protein"
                     /calculated_mol_wt=175208
     Region          307..1706
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          413..524
                     /region_name="DUF11"
                     /note="Domain of unknown function DUF11; pfam01345"
                     /db_xref="CDD:460168"
ORIGIN      
        1 mvekipktfg hkvrnliflm sfimsfflsv eksysqcgng fqqggflmnv nnniysvnir
       61 tgkstfitts pfvsgvgtgg lnsfatdaak rimyyvntan lasnttlyay niatnthvvv
      121 ssnvtvqgit lgtagvgsgg aafdggflyl aieqsltgtp npdtviykct msadgltlvn
      181 avpviqidea esmgdfaiig dlmvrtfgge vfeytipaty vfgsntvyts kvsgsgtyvs
      241 qiaqdhlnnl wlvgdrvrqy fpsthtisnt evvttsdgvt kdipspfdag gcvaadgiig
      301 rrvyrdsnnn gifdsvdtgi vgvtinihdd lnkngiidid dlllttvttg vggfynvsgl
      361 lpcdyivrvt dtgkvidgsa isttggniqt ealsisesnl thdfgyftpn snlgitktvs
      421 natpnvgsnv tftltvtnag pstatgvivn dllpsgytfv gslpsvgtyn sgtgvwtiga
      481 ltngaietln ivatvkatgs yvntatvtgi efdptlgnns ststpipinv ivavndpkit
      541 vastnaivtv pgnvttndtl ngvavtsant nvtpvttgpl svdsegnitv aantpsgvyn
      601 vtyqlceanp vtgsnitpsn cttaiaivev kndliakddn lgtiatsata ttaagsvlan
      661 nvngadtlng vavttantdv tpvttgsiri dvdgnvtiqp stpsgtytip yticetgatp
      721 vncktanitv evkndliakd dnlgtiatsa tattaagsvl anngsgfdtl ngvavttant
      781 dvtpvttgsi ridvdgnvti qpgtpsgtyt ipyticetga tpvncktani tvevkndlia
      841 kddnlgtiat satattaags vlanngsgfd tlngvavtta ntdvtpvttg siridvdgnv
      901 tiqpstpsgt ytipyticet gatpvnckta nitvevknti davddakvtv asggntlnvt
      961 lndklngsnv tigaavgqvs ltgvnvpggl tlntdgtitv gsttpsgtyq veyqicenga
     1021 npancdrtia ivevkndlia kddnlgtiat sttattaags vlanngngvd tlngvavtta
     1081 ntdvtpvttg siridvdgnv tiqpstpsgt ytipyticet gaapvnckta nitvevkndl
     1141 iakddnlgti atsatattaa gnvlanngsg fdtlngvavt tantdvtpvt tgsiridvdg
     1201 nvtiqpstps gtytipytic etgaapvnck tanitvevkn dliakddnlg tiatsttatt
     1261 aagsvlanng sgfdtlngva vttantdvtp vttgsiridv dgnvtiqpst psgtytipyt
     1321 icetgatpvn cktanitvev kntidavdda kvtvisggnt pnvtlndkln gsnvtigaav
     1381 gqvsltgvnv pggltlntdg titvgsttps gtyqveyqic enganpancd raiaivevkn
     1441 dliakddnlg tiatsttatt aagsvlanng ngvdtlngva vttantdvtp vttgsiridv
     1501 dgnvtiqpst psgtytipyt icetgaipvn cktanitvev kntidavdda kvtvasggnt
     1561 pnvtlndkln gsnvtigaav gqvsltgvni pvgltlntdg titvgsttps gtyqveyqic
     1621 enganpancd raiaivevkn dliakddnlg tiatsatatt aagsvlanng sgfdtlngva
     1681 vttantdvtp vttgsiridv dgnvtiqpry pkwylhdsly nl
//
LOCUS       WP_235877710             147 aa            linear   BCT 02-MAR-2025
DEFINITION  DM13 domain-containing protein [Flavobacterium davisii].
ACCESSION   WP_235877710
VERSION     WP_235877710.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 147)
  AUTHORS   Iyer,L.M., Anantharaman,V. and Aravind,L.
  TITLE     The DOMON domains are involved in heme and sugar recognition
  JOURNAL   Bioinformatics 23 (20), 2660-2664 (2007)
   PUBMED   17878204
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021996.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10517.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..147
                     /product="DM13 domain-containing protein"
                     /calculated_mol_wt=16448
     Region          <84..146
                     /region_name="DM13"
                     /note="Electron transfer DM13; cl02735"
                     /db_xref="CDD:470661"
ORIGIN      
        1 mqinklnynk yekkillgls flifsceqeg vlvkqnttlk vsesavllqt gnflptsgis
       61 avgkvdlfld keqyklklsd vmvssgpdlr vylsksdttn svinlgnfmn netttylips
      121 ginikeyryv lihcqqydhi fatallk
//
LOCUS       WP_235877712             252 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerophosphodiester phosphodiesterase family protein
            [Flavobacterium davisii].
ACCESSION   WP_235877712
VERSION     WP_235877712.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 252)
  AUTHORS   Kim,H. and Farrand,S.K.
  TITLE     Characterization of the acc operon from the nopaline-type Ti
            plasmid pTiC58, which encodes utilization of agrocinopines A and B
            and susceptibility to agrocin 84
  JOURNAL   J Bacteriol 179 (23), 7559-7572 (1997)
   PUBMED   9393724
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03009.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..252
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /GO_function="GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=29354
     Region          19..251
                     /region_name="PI-PLCc_GDPD_SF"
                     /note="Catalytic domain of phosphoinositide-specific
                     phospholipase C-like phosphodiesterases superfamily;
                     cl14615"
                     /db_xref="CDD:472694"
     Site            order(24,51,53,152,192)
                     /site_type="active"
                     /db_xref="CDD:176498"
     Site            order(24,66)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176498"
ORIGIN      
        1 mkkimlilvl pllsqaqefd iqghrgcrgl lpensiqamk kaidlgvttl emdvviskdk
       61 evllshepfl sceicldkmn qtieeskeqs fnlfqmnyde ikkydcgski hprfleqeki
      121 kthkpllnev idfvedyiqk kyperkifyn ietksdpkgd difhplpnef vdlligvlkd
      181 knitdktyiq sfdvrtlqyl hqkyaeiktv llvenkfsin knlkklgfkp tvyspefill
      241 dkqkvdflha ki
//
LOCUS       WP_235877770             136 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6010 family protein [Saccharopolyspora karakumensis].
ACCESSION   WP_235877770
VERSION     WP_235877770.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora karakumensis
  ORGANISM  Saccharopolyspora karakumensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 136)
  AUTHORS   He,M., Haltli,B., Summers,M., Feng,X. and Hucul,J.
  TITLE     Isolation and characterization of meridamycin biosynthetic gene
            cluster from Streptomyces sp. NRRL 30748
  JOURNAL   Gene 377, 109-118 (2006)
   PUBMED   16806745
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039957.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19473.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Saccharopolyspora karakumensis"
                     /db_xref="taxon:2530386"
     Protein         1..136
                     /product="DUF6010 family protein"
                     /calculated_mol_wt=14494
     Region          5..123
                     /region_name="DUF6010"
                     /note="Family of unknown function (DUF6010); pfam19473"
                     /db_xref="CDD:466102"
ORIGIN      
        1 mdtainlisp viiavvyial csllpeptrq kfnalmiaga gavytsgggm gawelaftav
       61 ltfcaykglt dyrwiglawl lhtawdvvhh vkgapiipaf ahsslgcalc dpilavwmfr
      121 gapaiqtwlt pkrvav
//
LOCUS       WP_235877816             119 aa            linear   BCT 02-MAR-2025
DEFINITION  GmrSD restriction endonuclease domain-containing protein
            [Flavobacterium davisii].
ACCESSION   WP_235877816
VERSION     WP_235877816.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 119)
  AUTHORS   Gao,H., Gong,X., Zhou,J., Zhang,Y., Duan,J., Wei,Y., Chen,L.,
            Deng,Z., Wang,J., Chen,S., Wu,G. and Wang,L.
  TITLE     Nicking mechanism underlying the DNA phosphorothioate-sensing
            antiphage defense by SspE
  JOURNAL   Nat Commun 13 (1), 6773 (2022)
   PUBMED   36351933
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 119)
  AUTHORS   Picton,D.M., Luyten,Y.A., Morgan,R.D., Nelson,A., Smith,D.L.,
            Dryden,D.T.F., Hinton,J.C.D. and Blower,T.R.
  TITLE     The phage defence island of a multidrug resistant plasmid uses both
            BREX and type IV restriction for complementary protection from
            viruses
  JOURNAL   Nucleic Acids Res 49 (19), 11257-11273 (2021)
   PUBMED   34657954
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015210.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03235.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..119
                     /product="GmrSD restriction endonuclease domain-containing
                     protein"
                     /calculated_mol_wt=14060
     Region          5..>85
                     /region_name="GmrSD"
                     /note="DNAse/DNA nickase specific for phosphorothioated or
                     glycosylated phage DNA, GmrSD/DndB/SspE family, contains
                     DUF262 and HNH nuclease domains [Defense mechanisms];
                     COG1479"
                     /db_xref="CDD:441088"
ORIGIN      
        1 mnhkepkyys iqelfsyedy vipiyqrnye wsepqitqli qdivdyvikn kdttdisqyy
       61 igslityerk legnviyeti dgqqrlttlt lllnvikkni qqliylgikn siylliavk
//
LOCUS       WP_235877819             294 aa            linear   BCT 02-MAR-2025
DEFINITION  GmrSD restriction endonuclease domain-containing protein
            [Flavobacterium davisii].
ACCESSION   WP_235877819
VERSION     WP_235877819.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 294)
  AUTHORS   Gao,H., Gong,X., Zhou,J., Zhang,Y., Duan,J., Wei,Y., Chen,L.,
            Deng,Z., Wang,J., Chen,S., Wu,G. and Wang,L.
  TITLE     Nicking mechanism underlying the DNA phosphorothioate-sensing
            antiphage defense by SspE
  JOURNAL   Nat Commun 13 (1), 6773 (2022)
   PUBMED   36351933
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 294)
  AUTHORS   Machnicka,M.A., Kaminska,K.H., Dunin-Horkawicz,S. and Bujnicki,J.M.
  TITLE     Phylogenomics and sequence-structure-function relationships in the
            GmrSD family of Type IV restriction enzymes
  JOURNAL   BMC Bioinformatics 16, 336 (2015)
   PUBMED   26493560
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019151.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07510.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..294
                     /product="GmrSD restriction endonuclease domain-containing
                     protein"
                     /calculated_mol_wt=35055
     Region          155..291
                     /region_name="DUF1524"
                     /note="Protein of unknown function (DUF1524); pfam07510"
                     /db_xref="CDD:462188"
ORIGIN      
        1 mlkgklyfdk yiikreftkg sdhwslkrlk wydgnkvgyv ntfdvdnvem ieginreilm
       61 llsmfhvsnp tlvykhwlna slkftleysg tnlandyksy lenlakafln drflainpkd
      121 yfeiiyineg kqknietaid inklhqgttv enfifnyldy llwqnyrtdn reyfkvkgek
      181 ilidnrikdf eytfrssveh yypqnpidkn lkikeqdiew ldnfgnlcli sgsknsrlsn
      241 fmptakkdyy tgsktidsik qrimmeyeyw dinrlnglne ikehgqemiq ilkk
//
LOCUS       WP_235877856             309 aa            linear   BCT 02-MAR-2025
DEFINITION  DMT family transporter [Saccharopolyspora karakumensis].
ACCESSION   WP_235877856
VERSION     WP_235877856.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora karakumensis
  ORGANISM  Saccharopolyspora karakumensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 309)
  AUTHORS   Jack,D.L., Yang,N.M. and Saier,M.H. Jr.
  TITLE     The drug/metabolite transporter superfamily
  JOURNAL   Eur J Biochem 268 (13), 3620-3639 (2001)
   PUBMED   11432728
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10007109
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Saccharopolyspora karakumensis"
                     /db_xref="taxon:2530386"
     Protein         1..309
                     /product="DMT family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=31188
     Region          1..149
                     /region_name="ydcZ"
                     /note="Uncharacterized membrane protein YdcZ, DUF606
                     family [Function unknown]; COG3238"
                     /db_xref="CDD:442470"
     Region          155..>266
                     /region_name="ydcZ"
                     /note="Uncharacterized membrane protein YdcZ, DUF606
                     family [Function unknown]; COG3238"
                     /db_xref="CDD:442470"
ORIGIN      
        1 mlltvlagal gplqaaangq lgdtlgdgha aatisfgsgl ilmilivavr srtrrqamsl
       61 prlvrsgqir wwnclaglcg vmvvlsegvt vgtlgvavfq islisglvts gvicdrlgit
      121 eqgkqpisvp rltgavltiv atiiaispnl hvpgtvalal mpfvagllag wqpagnaava
      181 dgtgsmlvsi gfnflvgfva lasalgiral lngvhfdfpa qwwlysggal glmsiaamaa
      241 lvrglgllll giasvagqll gslaldaafp alghpvhlat llgtllalva aaigtlptrr
      301 tqlpegekp
//
LOCUS       WP_235877617             275 aa            linear   BCT 02-MAR-2025
DEFINITION  Omp28-related outer membrane protein [Flavobacterium davisii].
ACCESSION   WP_235877617
VERSION     WP_235877617.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 275)
  AUTHORS   Slakeski,N., Margetts,M., Moore,C., Czajkowski,L., Barr,I.G. and
            Reynolds,E.C.
  TITLE     Characterization and expression of a novel Porphyromonas gingivalis
            outer membrane protein, Omp28
  JOURNAL   Oral Microbiol Immunol 17 (3), 150-156 (2002)
   PUBMED   12030966
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022985.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11551.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..275
                     /product="Omp28-related outer membrane protein"
                     /calculated_mol_wt=30512
     Region          105..269
                     /region_name="Omp28"
                     /note="Outer membrane protein Omp28; pfam11551"
                     /db_xref="CDD:431931"
ORIGIN      
        1 mkfskilsfl avfsllacsk enetkestpq aivdnqtpsa sskfiknvli edytgtwcgw
       61 cprisysttk vkentskvvs vaihrgssgg gfdpynysgt lpaviksfpt gilnrkiewk
      121 spqnnninqv vdltndntdl giamnstvds ekinlsinik atkdysnlkl vvyivedgli
      181 snqanytnfy vsdsvikdfv hndvlreclt niygdpveti kanntvtknf niplsrnvqn
      241 skkmrfvami lnndgeslnv revspnvkql fevtq
//
LOCUS       WP_235878025             416 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease subunit S [Flavobacterium davisii].
ACCESSION   WP_235878025
VERSION     WP_235878025.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 416)
  AUTHORS   Janscak,P. and Bickle,T.A.
  TITLE     The DNA recognition subunit of the type IB restriction-modification
            enzyme EcoAI tolerates circular permutions of its polypeptide chain
  JOURNAL   J Mol Biol 284 (4), 937-948 (1998)
   PUBMED   9837717
REFERENCE   2  (residues 1 to 416)
  AUTHORS   Bickle,T.A. and Kruger,D.H.
  TITLE     Biology of DNA restriction
  JOURNAL   Microbiol Rev 57 (2), 434-450 (1993)
   PUBMED   8336674
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01420.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..416
                     /product="restriction endonuclease subunit S"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=46997
     Region          14..206
                     /region_name="RMtype1_S_HpyCR35ORFAP-TRD1-CR1_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR), similar to Helicobacter pylori CR35 S subunit
                     (S.HpyCR35ORFAP) TRD1-CR1 and Mycoplasma haemofelis str.
                     Langford 1 S subunit (S2.Mha1ORF7190; cd17519"
                     /db_xref="CDD:341200"
     Site            order(124..125,127..128,156,158,171,175,178..179,182,
                     192..193,196..197,200,202..203)
                     /site_type="other"
                     /note="putative TRD-CR/TRD-CR interface [polypeptide
                     binding]"
                     /db_xref="CDD:341200"
     Region          225..407
                     /region_name="RMtype1_S_Ara36733I_TRD1-CR1_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR), similar to S.Ara36733I TRD1-CR1 AND S.Ara36733I
                     TRD2-CR2; cd17268"
                     /db_xref="CDD:341157"
     Site            order(326,329..330,332..333,361,363,369,373,376..377,380,
                     394..395,398..399,402,404..407)
                     /site_type="other"
                     /note="putative TRD-CR/TRD-CR interface [polypeptide
                     binding]"
                     /db_xref="CDD:341157"
ORIGIN      
        1 msfldklleg vevewktlge vcdfqngfaf qsslfkesgl pivritning snvelkdvky
       61 fdatdyrsgn plnyyiehgd vliamsgatt gkigyynlde kaylnqrvgk fipnkeilnn
      121 rflyhflltk seflyvlagg gaqpnlssns lkekllvpip cpdnpkksle iqqkivgild
      181 kfteltaelt aeltarkqqy syyreqlfsf denevkhlpm dnesigefqr gkrfvktdli
      241 aegvpvihyg emythygtwa ektisfvsee lvksknlrva qngevvivaa getiedigkg
      301 tawlgdegvv ihdacfsykt klnpkfvayf trtkqfhdqi kkhissgkis ainakglgka
      361 iipvpspeeq arivsildkf dtlttsiseg lpkeielrqk qyeyyrdmll tfdkki
//
LOCUS       WP_235878027             327 aa            linear   BCT 02-MAR-2025
DEFINITION  RhuM family protein [Flavobacterium davisii].
ACCESSION   WP_235878027
VERSION     WP_235878027.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 327)
  AUTHORS   Amavisit,P., Lightfoot,D., Browning,G.F. and Markham,P.F.
  TITLE     Variation between pathogenic serovars within Salmonella
            pathogenicity islands
  JOURNAL   J Bacteriol 185 (12), 3624-3635 (2003)
   PUBMED   12775700
REFERENCE   2  (residues 1 to 327)
  AUTHORS   Blanc-Potard,A.B., Solomon,F., Kayser,J. and Groisman,E.A.
  TITLE     The SPI-3 pathogenicity island of Salmonella enterica
  JOURNAL   J Bacteriol 181 (3), 998-1004 (1999)
   PUBMED   9922266
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13310.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     gene            1..327
                     /gene="rhuM"
     Protein         1..327
                     /product="RhuM family protein"
                     /calculated_mol_wt=37653
     Region          1..122
                     /region_name="RhuM"
                     /note="Uncharacterized protein RhuM, Salmonella virulence
                     factor [Function unknown]; COG3943"
                     /db_xref="CDD:443143"
     Region          72..303
                     /region_name="Virulence_RhuM"
                     /note="Virulence protein RhuM family; cl19850"
                     /db_xref="CDD:473228"
ORIGIN      
        1 mseiilyttd dgqtkinvql edetvwltid qmtelfnksr stinehiini yteneliese
       61 tmrkigisdf stkptnfynl dviisvgyrv ksvqgtrfrq watqrlkeyi vkgftmdddr
      121 lknlgggnyw kelldrirdi rssekvmyrq vldlyatatd ydpksdesiq ffkivqnklh
      181 yaahgktase iiymrvdsdk pfaglttfkg neptqaeali aknfleekel kvlnnlvaay
      241 fdlaelnaie ekemrmvdyi reldnilsst grkvldsagt ishnqahdka vqeykkykak
      301 tlssvekdyl ktlaalekta kkqsrkk
//
LOCUS       WP_235878051             141 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: phage protein Gp36 family protein [Flavobacterium].
ACCESSION   WP_235878051
VERSION     WP_235878051.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium
  ORGANISM  Flavobacterium
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018704.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07030.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Flavobacterium"
                     /db_xref="taxon:237"
     Protein         1..141
                     /product="phage protein Gp36 family protein"
                     /calculated_mol_wt=16131
     Region          <27..111
                     /region_name="Phage_Mu_Gp36"
                     /note="Bacteriophage Mu, Gp36; cl01818"
                     /db_xref="CDD:470358"
ORIGIN      
        1 mgfileedys vlirneikdi llenyspqkl siaqdmaisq iknylsgkfd vatifkaqgm
       61 drnphlvmvv idctlyhlyt sinpkkitei rsqryqdaid wlkevakgei tpdlpkltda
      121 nnqimtgfki ssknkpsnhr w
//
LOCUS       WP_235878059             412 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2586 family protein [Flavobacterium davisii].
ACCESSION   WP_235878059
VERSION     WP_235878059.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 412)
  AUTHORS   Jiang,F., Li,N., Wang,X., Cheng,J., Huang,Y., Yang,Y., Yang,J.,
            Cai,B., Wang,Y.P., Jin,Q. and Gao,N.
  TITLE     Cryo-EM Structure and Assembly of an Extracellular Contractile
            Injection System
  JOURNAL   Cell 177 (2), 370-383 (2019)
   PUBMED   30905475
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022218.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10758.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..412
                     /product="DUF2586 family protein"
                     /calculated_mol_wt=44948
     Region          7..409
                     /region_name="Phage_sheath_1"
                     /note="Phage tail sheath protein subtilisin-like domain;
                     cl01389"
                     /db_xref="CDD:470182"
ORIGIN      
        1 madlkgfnlq kgkqgasild nsegvtalvv sspvpqgmeh qksfviynrn dakakgitse
       61 fdtannvnvy rhideyyrla kegnplyiml veqnktitem telakkllvf aggyasllgi
      121 avnlpandvp vmlnglpknv idgiskaqal ynwsyennmp cqiflegyny sgtasavanl
      181 rdltnleadk vtvfigqdyq yaksktglak kyadigtvlg vaskalvhqn ignnelfnit
      241 datkdawlep alssnvlnid cfsdlqtlen kgfvfginyt glagvrinnd hvcapikmdt
      301 dkvinehtva ygrtmnkavr klraaylpki ktdwfvdkat gtlspativa ledignkvfa
      361 qmikegnisy gktivdkksd llvqktllvs fvivpkgtig eiqgtinlkt qt
//
LOCUS       WP_235878068             181 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: phage holin family protein [Flavobacterium].
ACCESSION   WP_235878068
VERSION     WP_235878068.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium
  ORGANISM  Flavobacterium
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae.
REFERENCE   1  (residues 1 to 181)
  AUTHORS   Shi,Y., Yan,Y., Ji,W., Du,B., Meng,X., Wang,H. and Sun,J.
  TITLE     Characterization and determination of holin protein of
            Streptococcus suis bacteriophage SMP in heterologous host
  JOURNAL   Virol J 9, 70 (2012)
   PUBMED   22436471
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 181)
  AUTHORS   Tan,K.S., Wee,B.Y. and Song,K.P.
  TITLE     Evidence for holin function of tcdE gene in the pathogenicity of
            Clostridium difficile
  JOURNAL   J Med Microbiol 50 (7), 613-619 (2001)
   PUBMED   11444771
REFERENCE   3  (residues 1 to 181)
  AUTHORS   Martin,A.C., Lopez,R. and Garcia,P.
  TITLE     Functional analysis of the two-gene lysis system of the
            pneumococcal phage Cp-1 in homologous and heterologous host cells
  JOURNAL   J Bacteriol 180 (2), 210-217 (1998)
   PUBMED   9440507
REFERENCE   4  (residues 1 to 181)
  AUTHORS   Steiner,M., Lubitz,W. and Blasi,U.
  TITLE     The missing link in phage lysis of gram-positive bacteria: gene 14
            of Bacillus subtilis phage phi 29 encodes the functional homolog of
            lambda S protein
  JOURNAL   J Bacteriol 175 (4), 1038-1042 (1993)
   PUBMED   8432697
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016961.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05105.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Flavobacterium"
                     /db_xref="taxon:237"
     Protein         1..181
                     /product="phage holin family protein"
                     /calculated_mol_wt=21088
     Region          49..164
                     /region_name="Phage_holin_4_1"
                     /note="Bacteriophage holin family; cl01989"
                     /db_xref="CDD:470425"
ORIGIN      
        1 mktinyildg fgfvdfkdfl kstfghtmdk kiilldslla fvfcsvntlf gfniafftay
       61 vvllifewft gvkasfkkge nhssrkfgrm llkiatylvp iyilnqfskn sqfpsimgye
      121 vdpfmwlywv fllgmiwqll isllenlnnl gykyasilik iinkqfykkf eldaeqsnsf
      181 k
//
LOCUS       WP_235878104              94 aa            linear   BCT 02-MAR-2025
DEFINITION  LysM peptidoglycan-binding domain-containing protein
            [Flavobacterium davisii].
ACCESSION   WP_235878104
VERSION     WP_235878104.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 94)
  AUTHORS   Bateman,A. and Bycroft,M.
  TITLE     The structure of a LysM domain from E. coli membrane-bound lytic
            murein transglycosylase D (MltD)
  JOURNAL   J Mol Biol 299 (4), 1113-1119 (2000)
   PUBMED   10843862
REFERENCE   2  (residues 1 to 94)
  AUTHORS   Joris,B., Englebert,S., Chu,C.P., Kariyama,R., Daneo-Moore,L.,
            Shockman,G.D. and Ghuysen,J.M.
  TITLE     Modular design of the Enterococcus hirae muramidase-2 and
            Streptococcus faecalis autolysin
  JOURNAL   FEMS Microbiol Lett 70 (3), 257-264 (1992)
   PUBMED   1352512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01476.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..94
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=10838
     Region          <8..35
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
ORIGIN      
        1 mniswsmhiv kkgdtlesva qklgissqtl rqyhntycdl keiieenhlk gisaillpss
       61 qeiqefkefe kkirpltvyh yttyliifin pvti
//
LOCUS       WP_235878117             501 aa            linear   BCT 02-MAR-2025
DEFINITION  oleate hydratase [Flavobacterium davisii].
ACCESSION   WP_235878117
VERSION     WP_235878117.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 501)
  AUTHORS   Yang,B., Chen,H., Song,Y., Chen,Y.Q., Zhang,H. and Chen,W.
  TITLE     Myosin-cross-reactive antigens from four different lactic acid
            bacteria are fatty acid hydratases
  JOURNAL   Biotechnol Lett 35 (1), 75-81 (2013)
   PUBMED   22955678
REFERENCE   2  (residues 1 to 501)
  AUTHORS   Rosberg-Cody,E., Liavonchanka,A., Gobel,C., Ross,R.P.,
            O'Sullivan,O., Fitzgerald,G.F., Feussner,I. and Stanton,C.
  TITLE     Myosin-cross-reactive antigen (MCRA) protein from Bifidobacterium
            breve is a FAD-dependent fatty acid hydratase which has a function
            in stress protection
  JOURNAL   BMC Biochem 12, 9 (2011)
   PUBMED   21329502
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 501)
  AUTHORS   Volkov,A., Liavonchanka,A., Kamneva,O., Fiedler,T., Goebel,C.,
            Kreikemeyer,B. and Feussner,I.
  TITLE     Myosin cross-reactive antigen of Streptococcus pyogenes M49 encodes
            a fatty acid double bond hydratase that plays a role in oleic acid
            detoxification and bacterial virulence
  JOURNAL   J Biol Chem 285 (14), 10353-10361 (2010)
   PUBMED   20145247
REFERENCE   4  (residues 1 to 501)
  AUTHORS   Kil,K.S., Cunningham,M.W. and Barnett,L.A.
  TITLE     Cloning and sequence analysis of a gene encoding a 67-kilodalton
            myosin-cross-reactive antigen of Streptococcus pyogenes reveals its
            similarity with class II major histocompatibility antigens
  JOURNAL   Infect Immun 62 (6), 2440-2449 (1994)
   PUBMED   8188369
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06100.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..501
                     /product="oleate hydratase"
                     /EC_number="4.2.1.53"
                     /GO_function="GO:0050151 - oleate hydratase activity
                     [Evidence IEA]"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=57402
     Region          1..>287
                     /region_name="COG3349"
                     /note="Uncharacterized protein, contains NAD-binding
                     domain and a Fe-S cluster [General function prediction
                     only]"
                     /db_xref="CDD:442577"
ORIGIN      
        1 mkkivifgsg vtglklahel vktgnmvtvy ekknqpggkc igtfqnglpt elthrqmfas
       61 nmnfintlne ieynggsllk nieplnnvqf ywakenkfmd fkrnffnffe qlidnlksan
      121 slffsgvpln diywfrskll vnkkdkntln mplseylefd krpklanfvl kiistwiggn
      181 gdtktgdfll lfnyknltke kvytktntts itlngpisds liqpwydflk qkgvifhfne
      241 gvkklnisng kalsaiseke nvieadafil aippkqvidm fptigerlsv nyikshgfqf
      301 hfkeipdlfv dktigiiads awglsyklyh tkkyankefs ndvkltisvt atktekekgs
      361 lynkpliect lkeveeeilf qmgikenmhk dimygnlnig vgakyleytd fniekyrnwy
      421 hgplirendn gkffwafene linpdynnrv ginsascdnv fisgewinde nqvwtvpsti
      481 ercmenaaic skvvdnylie a
//
LOCUS       WP_235878175             138 aa            linear   BCT 02-MAR-2025
DEFINITION  CDC27 family protein [Flavobacterium davisii].
ACCESSION   WP_235878175
VERSION     WP_235878175.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 138)
  AUTHORS   Peters,J.M.
  TITLE     The anaphase promoting complex/cyclosome: a machine designed to
            destroy
  JOURNAL   Nat Rev Mol Cell Biol 7 (9), 644-656 (2006)
   PUBMED   16896351
REFERENCE   2  (residues 1 to 138)
  AUTHORS   Vodermaier,H.C., Gieffers,C., Maurer-Stroh,S., Eisenhaber,F. and
            Peters,J.M.
  TITLE     TPR subunits of the anaphase-promoting complex mediate binding to
            the activator protein CDH1
  JOURNAL   Curr Biol 13 (17), 1459-1468 (2003)
   PUBMED   12956947
REFERENCE   3  (residues 1 to 138)
  AUTHORS   Peters,J.M.
  TITLE     The anaphase-promoting complex: proteolysis in mitosis and beyond
  JOURNAL   Mol Cell 9 (5), 931-943 (2002)
   PUBMED   12049731
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024299.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12895.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..138
                     /product="CDC27 family protein"
                     /calculated_mol_wt=15699
     Region          1..>88
                     /region_name="BamD"
                     /note="Outer membrane protein assembly factor BamD,
                     BamD/ComL family [Cell wall/membrane/envelope biogenesis];
                     COG4105"
                     /db_xref="CDD:443281"
     Region          35..60
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(36..37,40..41,43,67,70..71,74..75,77..78,101,
                     104..105,108..109,112)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          65..95
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          100..125
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mkkiiliitf ltglatsaqn nekytnsltp eqdklfdkal eklnskkysd aielfnllip
       61 slkdqkspyy ylaqayflnk qysecietct kglvigpegn flnyyrakan ielgktdsvc
      121 ddikksktqe kellkycn
//
LOCUS       WP_235878180             329 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Saccharopolyspora
            karakumensis].
ACCESSION   WP_235878180
VERSION     WP_235878180.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora karakumensis
  ORGANISM  Saccharopolyspora karakumensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 329)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 329)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 329)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Saccharopolyspora karakumensis"
                     /db_xref="taxon:2530386"
     Protein         1..329
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=35899
     Region          32..320
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(130..131,134,171)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238347"
ORIGIN      
        1 mflrwtrtgl mllcatalaa cnapatesap prvslpncdg hvsvsepprr avslnqstte
       61 imlalgladr mvgtatwtdp vdpalaaena rvprlsdnnp sfesvlaaep dvvlgayqav
      121 ftdegvasre rfaelgvpty lspsncfpee aplaepveld diyrevqeia tifdvpqrge
      181 alvaqlrqrv adaqrkavph rdtsvlfwfa rtespyvags tgapaimtrt lgvrnayddv
      241 rsmwpqvswe dvlardpdll vlgdltrdge gdslaakqef lrtdpamsrl pavgegrwms
      301 mtgtemnism rtitgierla drlaelerr
//
LOCUS       WP_235878251             364 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Saccharopolyspora
            karakumensis].
ACCESSION   WP_235878251
VERSION     WP_235878251.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora karakumensis
  ORGANISM  Saccharopolyspora karakumensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 364)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 364)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02771.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Saccharopolyspora karakumensis"
                     /db_xref="taxon:2530386"
     Protein         1..364
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=39563
     Region          2..358
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(56,86,88,112,114,341..343,345,347)
                     /site_type="active"
                     /db_xref="CDD:173852"
ORIGIN      
        1 mptrevqllk dsglvtllgp aehggaeqhw ttacrvvrev sagdgsigql lghhyvwtwa
       61 mrlvgtpeqi aevdelyttr ghffggvvnp rdhdlvvide getllyrgkk ffstgskvad
      121 llvmegtles sgnsvfavvp aqqdgitfgd dwnnlgqrlt vsgsveiddv rvpwsgaagy
      181 vdkqfrpsaf stlhvpalhl vfanlylgia qaalragvty trghtrawpy ggegknsgte
      241 efyvlegygd lqsklwaaet ltdaaganla qllhadrdsv treqrgraav lvsaakqrai
      301 dvgleianrv feltgarata nsvgmdlywr nlrthslhdp vaykrvevgr ytlrgdlptp
      361 spys
//
LOCUS       WP_235878280             455 aa            linear   BCT 02-MAR-2025
DEFINITION  tryptophan dimethylallyltransferase family protein
            [Saccharopolyspora karakumensis].
ACCESSION   WP_235878280
VERSION     WP_235878280.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora karakumensis
  ORGANISM  Saccharopolyspora karakumensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 455)
  AUTHORS   Ding,Y., Williams,R.M. and Sherman,D.H.
  TITLE     Molecular analysis of a 4-dimethylallyltryptophan synthase from
            Malbranchea aurantiaca
  JOURNAL   J Biol Chem 283 (23), 16068-16076 (2008)
   PUBMED   18390548
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023417.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11991.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Saccharopolyspora karakumensis"
                     /db_xref="taxon:2530386"
     Protein         1..455
                     /product="tryptophan dimethylallyltransferase family
                     protein"
                     /GO_function="GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /GO_process="GO:0009820 - alkaloid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=50704
     Region          99..450
                     /region_name="ABBA-PTs"
                     /note="ABBA-type aromatic prenyltransferases (PTases);
                     cl19121"
                     /db_xref="CDD:473141"
     Site            order(159,172,174,241,243,245,306,308,310,358,372,374,426,
                     443,447)
                     /site_type="active"
                     /db_xref="CDD:260105"
ORIGIN      
        1 merthhrqsg nagadhahit gvnlgrcllf ttvhsahrtl sarrpfpirr ldeivlmllt
       61 gamprsrvta mrkvgvvpst ragsssvrrw gvfpthgvsf tqfltsqyrt vaeqlgfsas
      121 dvetlvtels valspwgdhp igscpevpsf vsadgfpaem siswrgrqpe lrilfeslge
      181 datpagcqra gralterlad rpdvdltryh rvedlfvsdd prvnrptiwh slawrpgett
      241 rykayfnpqa esadpvdvla rtteamgrlg lerpwgsvrm wmpemmdrgn eiefaaldlt
      301 nsdrarvkvy frvtsrawed ldsvaslaag hdseraarvw rslyhgqdka egeepmvcla
      361 frrgsaqpee anlylrlpgn alsdedaahr tavlmrqegl dpepylsmig slaprhpstm
      421 tglqdllafr ttspdeaadi gmylrfsvyd rpvef
//
LOCUS       WP_235878378             189 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase [Flavobacterium davisii].
ACCESSION   WP_235878378
VERSION     WP_235878378.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..189
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=20439
     Region          <24..144
                     /region_name="Peptidases_S8_S53"
                     /note="Peptidase domain in the S8 and S53 families;
                     cl10459"
                     /db_xref="CDD:415849"
ORIGIN      
        1 mikrgkkiki pygsngvlyp kpsqingsin syaggknlit vgatrilnda gyysvteyss
       61 igpttdgrik pdicaegeti dfnfqkeegt sfatplvssi vsafseeyki nngqyptatt
      121 ikaalinsal digdpgpdyi sgwgqcngee lfryaaknal viqdiktlra ssetiykipl
      181 yypvviylk
//
LOCUS       WP_235878442             258 aa            linear   BCT 02-MAR-2025
DEFINITION  PKD domain-containing protein [Flavobacterium davisii].
ACCESSION   WP_235878442
VERSION     WP_235878442.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 258)
  AUTHORS   Bycroft,M., Bateman,A., Clarke,J., Hamill,S.J., Sandford,R.,
            Thomas,R.L. and Chothia,C.
  TITLE     The structure of a PKD domain from polycystin-1: implications for
            polycystic kidney disease
  JOURNAL   EMBO J 18 (2), 297-305 (1999)
   PUBMED   9889186
REFERENCE   2  (residues 1 to 258)
  AUTHORS   .
  TITLE     Polycystic kidney disease: the complete structure of the PKD1 gene
            and its protein. The International Polycystic Kidney Disease
            Consortium
  JOURNAL   Cell 81 (2), 289-298 (1995)
   PUBMED   7736581
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012999.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00801.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..258
                     /product="PKD domain-containing protein"
                     /calculated_mol_wt=28319
     Region          <56..>178
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
ORIGIN      
        1 mkfkqvvlfi ililtiscyq esfipiegdf ttqfvnades vpvliridnk lqgaetfqwe
       61 feggnpatst vakpgeilyn qpgtykiklt atnsdgeski iektivikda lnakftygvi
      121 qdnfspvevq isnlttgqgi tynwqfedgn patfsgqhpp hvifttpgkh kisltitngf
      181 enqtidgqve vapllvsdfs wdvavadtdy qapvtlkmnn ssisathyiw qanggqinnq
      241 nlnnptitfn tpaliplt
//
LOCUS       WP_235878486             860 aa            linear   BCT 02-MAR-2025
DEFINITION  PEP/pyruvate-binding domain-containing protein [Saccharopolyspora
            karakumensis].
ACCESSION   WP_235878486
VERSION     WP_235878486.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora karakumensis
  ORGANISM  Saccharopolyspora karakumensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 860)
  AUTHORS   Lim,K., Read,R.J., Chen,C.C., Tempczyk,A., Wei,M., Ye,D., Wu,C.,
            Dunaway-Mariano,D. and Herzberg,O.
  TITLE     Swiveling domain mechanism in pyruvate phosphate dikinase
  JOURNAL   Biochemistry 46 (51), 14845-14853 (2007)
   PUBMED   18052212
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01326.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..860
                     /organism="Saccharopolyspora karakumensis"
                     /db_xref="taxon:2530386"
     Protein         1..860
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0016310 - phosphorylation [Evidence IEA]"
                     /calculated_mol_wt=91696
     Region          19..860
                     /region_name="PRK06241"
                     /note="phosphoenolpyruvate synthase; Validated"
                     /db_xref="CDD:235751"
ORIGIN      
        1 mhdgvtfelt hegvvavpvl rldevragtg evvggkaanl geligagfrv ppgfvittaa
       61 yeevcrvadl ldglpasapk irdritatal ppelataite ayaelgsgpv avrssataed
      121 lpdasfagqq dtylnvvgae alldavrrcw aslwtdravs yreangidhs tvrlavvvqe
      181 mvdasaagvl ftadpvtgnr adcaidantg lgesvvsgav tpdhfvvsgd rvterlgdkt
      241 tsvraiasgg vetvaqdpga asisdeqare laelgrevar hygapqdlew aigadgvwlt
      301 qsrpittlfp lpaetedglr vylsvnvaqg vyrpltpmgv atlgllatgv lrelglpapg
      361 arpapfrpvd gwlflditgt tgnrvgrall prllaaaear tgrvyeslld dprlprkpga
      421 tartlrafgl llarnripll vagvlrdpar araeafrrvd elraelsspv prtarerldt
      481 arhallrgta prmawvaprm mpilllsrll pklvrateae ihvvlsgiph nvttemdlql
      541 waiaqrigpe vadlparyrd ralpsevlra lddflaahgh rtageidagv prwseepgqv
      601 lalvenyart geaghdaaqr frqraeeaav qaseivsrlp nrvhaglanf lldrvrqlag
      661 mrelpkycav lgiaaarrhl raigdelasd drlsdpsdvf fldyeelsel idgldhreli
      721 atrrathere lrrkhlprll lsdgtepetl lpttesgnal rgtsasagtv tgiarvvrdp
      781 anarlspgdv lvapstdpgw tplflttsgl vmemggpnsh gatvareygi pavvgvpdat
      841 tritdgrtit vngsagvvel
//
LOCUS       WP_235878578              79 aa            linear   BCT 02-MAR-2025
DEFINITION  methylmalonyl-CoA mutase family protein, partial [Saccharopolyspora
            karakumensis].
ACCESSION   WP_235878578
VERSION     WP_235878578.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora karakumensis
  ORGANISM  Saccharopolyspora karakumensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 79)
  AUTHORS   Mancia,F., Keep,N.H., Nakagawa,A., Leadlay,P.F., McSweeney,S.,
            Rasmussen,B., Bosecke,P., Diat,O. and Evans,P.R.
  TITLE     How coenzyme B12 radicals are generated: the crystal structure of
            methylmalonyl-coenzyme A mutase at 2 A resolution
  JOURNAL   Structure 4 (3), 339-350 (1996)
   PUBMED   8805541
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013781.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01642.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Saccharopolyspora karakumensis"
                     /db_xref="taxon:2530386"
     Protein         1..>79
                     /product="methylmalonyl-CoA mutase family protein"
                     /GO_function="GO:0016866 - intramolecular transferase
                     activity [Evidence IEA]"
                     /GO_function="GO:0031419 - cobalamin binding [Evidence
                     IEA]"
     Region          1..>79
                     /region_name="PRK09426"
                     /note="methylmalonyl-CoA mutase; Reviewed"
                     /db_xref="CDD:236508"
ORIGIN      
        1 mtqipnfadv pldapsgade drwrsevlaa tgkesdalaw eapegidvqp lytesdvdgl
       61 dflstypgla pflrgpypt
//
LOCUS       WP_235878636             164 aa            linear   BCT 02-MAR-2025
DEFINITION  VTT domain-containing protein [Saccharopolyspora karakumensis].
ACCESSION   WP_235878636
VERSION     WP_235878636.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora karakumensis
  ORGANISM  Saccharopolyspora karakumensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 164)
  AUTHORS   Morita,K., Hama,Y., Izume,T., Tamura,N., Ueno,T., Yamashita,Y.,
            Sakamaki,Y., Mimura,K., Morishita,H., Shihoya,W., Nureki,O.,
            Mano,H. and Mizushima,N.
  TITLE     Genome-wide CRISPR screen identifies TMEM41B as a gene required for
            autophagosome formation
  JOURNAL   J Cell Biol 217 (11), 3817-3828 (2018)
   PUBMED   30093494
REFERENCE   2  (residues 1 to 164)
  AUTHORS   Inadome,H., Noda,Y., Kamimura,Y., Adachi,H. and Yoda,K.
  TITLE     Tvp38, Tvp23, Tvp18 and Tvp15: novel membrane proteins in the
            Tlg2-containing Golgi/endosome compartments of Saccharomyces
            cerevisiae
  JOURNAL   Exp Cell Res 313 (4), 688-697 (2007)
   PUBMED   17178117
REFERENCE   3  (residues 1 to 164)
  AUTHORS   Inadome,H., Noda,Y., Adachi,H. and Yoda,K.
  TITLE     Immunoisolaton of the yeast Golgi subcompartments and
            characterization of a novel membrane protein, Svp26, discovered in
            the Sed5-containing compartments
  JOURNAL   Mol Cell Biol 25 (17), 7696-7710 (2005)
   PUBMED   16107716
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020893.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09335.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Saccharopolyspora karakumensis"
                     /db_xref="taxon:2530386"
     Protein         1..164
                     /product="VTT domain-containing protein"
                     /calculated_mol_wt=17661
     Region          12..150
                     /region_name="DedA"
                     /note="Membrane integrity protein DedA, putative
                     transporter, DedA/Tvp38 family [Cell
                     wall/membrane/envelope biogenesis]; cl46837"
                     /db_xref="CDD:481177"
ORIGIN      
        1 mltiigllst tfgvsvasal lplisvelfa vglvlkepdi pwwvlalvia tgqiggkllh
       61 yyaargnirl pafmrrekke kaetkgrwkt wleqfrencr trpvwagtvl lisaaaslpp
      121 faavaiiagw akvpvstfli tgfigrfarf galaaapsam aawl
//
LOCUS       WP_235878664             277 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Saccharopolyspora karakumensis].
ACCESSION   WP_235878664
VERSION     WP_235878664.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora karakumensis
  ORGANISM  Saccharopolyspora karakumensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Saccharopolyspora karakumensis"
                     /db_xref="taxon:2530386"
     Protein         1..277
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=29780
     Region          1..149
                     /region_name="SRPBCC"
                     /note="Ligand-binding SRPBCC domain [General function
                     prediction only]; COG4276"
                     /db_xref="CDD:443417"
     Region          151..272
                     /region_name="NUDIX_MutT_NudA_like"
                     /note="MutT pyrophosphohydrolase; cd03425"
                     /db_xref="CDD:467531"
ORIGIN      
        1 mavlrstgli eaplatvgaa lrhtrtaetg ltalgirgrs stspdsllvp gdelsfrlsa
       61 ftlttrivra dsdglssvlv agplarlrhe tvlaqvgprt lltdsvrwts pfgplgrlgd
      121 vavgrrlvld vlaariravr elaeswaark ivvgtaivhe grllaqqrsy pashagqwel
      181 pggrvepaed eseavvrecr eelgvevrpt grlgtdvpld ngmllrihta eltdpaqqpt
      241 avehrdvrwv saaelpaldw letdrvllht lrellga
//
LOCUS       WP_235877447             280 aa            linear   BCT 02-MAR-2025
DEFINITION  M43 family zinc metalloprotease [Flavobacterium davisii].
ACCESSION   WP_235877447
VERSION     WP_235877447.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 280)
  AUTHORS   Chen,B.K., Overgaard,M.T., Bale,L.K., Resch,Z.T., Christiansen,M.,
            Oxvig,C. and Conover,C.A.
  TITLE     Molecular regulation of the IGF-binding protein-4 protease system
            in human fibroblasts: identification of a novel inducible inhibitor
  JOURNAL   Endocrinology 143 (4), 1199-1205 (2002)
   PUBMED   11897673
REFERENCE   2  (residues 1 to 280)
  AUTHORS   Mazerbourg,S., Overgaard,M.T., Oxvig,C., Christiansen,M.,
            Conover,C.A., Laurendeau,I., Vidaud,M., Tosser-Klopp,G., Zapf,J.
            and Monget,P.
  TITLE     Pregnancy-associated plasma protein-A (PAPP-A) in ovine, bovine,
            porcine, and equine ovarian follicles: involvement in IGF binding
            protein-4 proteolytic degradation and mRNA expression during
            follicular development
  JOURNAL   Endocrinology 142 (12), 5243-5253 (2001)
   PUBMED   11713222
REFERENCE   3  (residues 1 to 280)
  AUTHORS   Chelius,D., Conover,C.A., Baldwin,M.A. and Spencer,E.M.
  TITLE     Characterization of the enzymatic specificity of the IGF-dependent
            insulin-like growth factor binding protein-4 (IGFBP-4) protease
  JOURNAL   Growth Horm IGF Res 10 (6), 360-366 (2000)
   PUBMED   11161967
REFERENCE   4  (residues 1 to 280)
  AUTHORS   Overgaard,M.T., Haaning,J., Boldt,H.B., Olsen,I.M., Laursen,L.S.,
            Christiansen,M., Gleich,G.J., Sottrup-Jensen,L., Conover,C.A. and
            Oxvig,C.
  TITLE     Expression of recombinant human pregnancy-associated plasma
            protein-A and identification of the proform of eosinophil major
            basic protein as its physiological inhibitor
  JOURNAL   J Biol Chem 275 (40), 31128-31133 (2000)
   PUBMED   10913121
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017393.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05572.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..280
                     /product="M43 family zinc metalloprotease"
                     /calculated_mol_wt=31329
     Region          164..>271
                     /region_name="ZnMc"
                     /note="Zinc-dependent metalloprotease. This super-family
                     of metalloproteases contains two major branches, the
                     astacin-like proteases and the adamalysin/reprolysin-like
                     proteases. Both branches have wide phylogenetic
                     distribution, and contain sub-families, which...; cl00064"
                     /db_xref="CDD:469599"
     Site            order(234..235,238,244)
                     /site_type="active"
                     /db_xref="CDD:238124"
ORIGIN      
        1 mkkalilisl llslegglfa qilecgtkeq neitlrknpn alkkrnefei ftkkfvenlr
       61 knkstnnkal atsyiipvvf hiygttqsgk svtyekivna lnavnndfng lnddfnsvep
      121 ffqsrratln iqfrlakidp nggnttgvvf hsikngygng ggydtqiaad awdnkkyvnv
      181 yiqndlynqn iynnsgvawy pdlnmtnnnt arivfngayl lgntdkefss tlthefghff
      241 nlihtfedgc tgtdqvddtp kedakhslnc tpvqivmeik
//
LOCUS       WP_235878837              74 aa            linear   BCT 02-MAR-2025
DEFINITION  Rid family hydrolase [Saccharopolyspora karakumensis].
ACCESSION   WP_235878837
VERSION     WP_235878837.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora karakumensis
  ORGANISM  Saccharopolyspora karakumensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 74)
  AUTHORS   Lambrecht,J.A., Flynn,J.M. and Downs,D.M.
  TITLE     Conserved YjgF protein family deaminates reactive enamine/imine
            intermediates of pyridoxal 5'-phosphate (PLP)-dependent enzyme
            reactions
  JOURNAL   J Biol Chem 287 (5), 3454-3461 (2012)
   PUBMED   22094463
REFERENCE   2  (residues 1 to 74)
  AUTHORS   Thakur,K.G., Praveena,T. and Gopal,B.
  TITLE     Mycobacterium tuberculosis Rv2704 is a member of the
            YjgF/YER057c/UK114 family
  JOURNAL   Proteins 78 (3), 773-778 (2010)
   PUBMED   19899170
REFERENCE   3  (residues 1 to 74)
  AUTHORS   Schmitz,G. and Downs,D.M.
  TITLE     Reduced transaminase B (IlvE) activity caused by the lack of yjgF
            is dependent on the status of threonine deaminase (IlvA) in
            Salmonella enterica serovar Typhimurium
  JOURNAL   J Bacteriol 186 (3), 803-810 (2004)
   PUBMED   14729707
REFERENCE   4  (residues 1 to 74)
  AUTHORS   Morishita,R., Kawagoshi,A., Sawasaki,T., Madin,K., Ogasawara,T.,
            Oka,T. and Endo,Y.
  TITLE     Ribonuclease activity of rat liver perchloric acid-soluble protein,
            a potent inhibitor of protein synthesis
  JOURNAL   J Biol Chem 274 (29), 20688-20692 (1999)
   PUBMED   10400702
REFERENCE   5  (residues 1 to 74)
  AUTHORS   Rappu,P., Shin,B.S., Zalkin,H. and Mantsala,P.
  TITLE     A role for a highly conserved protein of unknown function in
            regulation of Bacillus subtilis purA by the purine repressor
  JOURNAL   J Bacteriol 181 (12), 3810-3815 (1999)
   PUBMED   10368157
REFERENCE   6  (residues 1 to 74)
  AUTHORS   Oka,T., Tsuji,H., Noda,C., Sakai,K., Hong,Y.M., Suzuki,I., Munoz,S.
            and Natori,Y.
  TITLE     Isolation and characterization of a novel perchloric acid-soluble
            protein inhibiting cell-free protein synthesis
  JOURNAL   J Biol Chem 270 (50), 30060-30067 (1995)
   PUBMED   8530410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013228.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01042.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Saccharopolyspora karakumensis"
                     /db_xref="taxon:2530386"
     Protein         1..74
                     /product="Rid family hydrolase"
                     /calculated_mol_wt=8208
     Region          <3..69
                     /region_name="YjgF_YER057c_UK114_family"
                     /note="YjgF, YER057c, and UK114 belong to a large family
                     of proteins present in bacteria, archaea, and eukaryotes
                     with no definitive function. The conserved domain is
                     similar in structure to chorismate mutase but there is no
                     sequence similarity and no...; cl10015"
                     /db_xref="CDD:447879"
     Site            order(31,35,49,64)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:100011"
ORIGIN      
        1 mrniggvlae agctfadvvr vryflpnrhd fppcwpvlrr hfgesrpagt ilicdlidtg
       61 mkieievear rptg
//
LOCUS       WP_235878859             250 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6474 family protein [Saccharopolyspora karakumensis].
ACCESSION   WP_235878859
VERSION     WP_235878859.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora karakumensis
  ORGANISM  Saccharopolyspora karakumensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040114.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20079.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Saccharopolyspora karakumensis"
                     /db_xref="taxon:2530386"
     Protein         1..250
                     /product="DUF6474 family protein"
                     /calculated_mol_wt=26683
     Region          <96..248
                     /region_name="DUF6474"
                     /note="Family of unknown function (DUF6474); pfam20079"
                     /db_xref="CDD:466283"
ORIGIN      
        1 mrklarrrgk itqgaqrgcr kcavkktkae nkarrqidka arkaaarska aekkaarkpa
       61 aqsapaqqad patpppltsa pvgkkaakal lkadkqtaka ikkgefgtvt pgnakkivgi
      121 akivgpvllp falravstvr esydrsrark lgvpvddlgk ftghgaslha riagdsvalr
      181 dlreqstgee rghartyadq aearlaqlts avraaermps prrrsahrav dqelsriese
      241 lltrfgvptg
//
LOCUS       WP_235878868            1131 aa            linear   BCT 02-MAR-2025
DEFINITION  L-tyrosine/L-tryptophan isonitrile synthase family protein
            [Saccharopolyspora karakumensis].
ACCESSION   WP_235878868
VERSION     WP_235878868.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora karakumensis
  ORGANISM  Saccharopolyspora karakumensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 1131)
  AUTHORS   Drake,E.J. and Gulick,A.M.
  TITLE     Three-dimensional structures of Pseudomonas aeruginosa PvcA and
            PvcB, two proteins involved in the synthesis of
            2-isocyano-6,7-dihydroxycoumarin
  JOURNAL   J Mol Biol 384 (1), 193-205 (2008)
   PUBMED   18824174
REFERENCE   2  (residues 1 to 1131)
  AUTHORS   Stintzi,A., Cornelis,P., Hohnadel,D., Meyer,J.M., Dean,C.,
            Poole,K., Kourambas,S. and Krishnapillai,V.
  TITLE     Novel pyoverdine biosynthesis gene(s) of Pseudomonas aeruginosa PAO
  JOURNAL   Microbiology (Reading) 142 (Pt 5), 1181-1190 (1996)
   PUBMED   8704959
REFERENCE   3  (residues 1 to 1131)
  AUTHORS   Briza,P., Eckerstorfer,M. and Breitenbach,M.
  TITLE     The sporulation-specific enzymes encoded by the DIT1 and DIT2 genes
            catalyze a two-step reaction leading to a soluble
            LL-dityrosine-containing precursor of the yeast spore wall
  JOURNAL   Proc Natl Acad Sci U S A 91 (10), 4524-4528 (1994)
   PUBMED   8183942
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016996.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05141.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1131
                     /organism="Saccharopolyspora karakumensis"
                     /db_xref="taxon:2530386"
     Protein         1..1131
                     /product="L-tyrosine/L-tryptophan isonitrile synthase
                     family protein"
                     /calculated_mol_wt=123524
     Region          778..>861
                     /region_name="DIT1_PvcA"
                     /note="Pyoverdine/dityrosine biosynthesis protein;
                     cl19832"
                     /db_xref="CDD:473219"
ORIGIN      
        1 mtareavtar qaeadlplla edsaqdwpvd glpapgpwrl ltvaeandll taggyglwve
       61 qardgdllla gvgtgiplga eatwadlyra lvrlrrtrsv fdaawlnrlt gsltpertaq
      121 prvtevpaer vdlvcgadre lahrvlaslr gpgtgpkvpf peagvtvgrr eravrvqaid
      181 srdqalralr gwerlasvva gdpelrmhca tqpvpgavvd tgtgttallr vidpapahpr
      241 hpggtiaadl dallhpdsdg apkllrvvld nrfarredel dhflehfvrp llrvfrlald
      301 thglglfald etgfavelsp elqatgrivv tdheritaep sraevttgvr alvstlerlg
      361 egfaslragd rgrevrdavr rvigeelryl aphtaellsg eqplqsyaht vpegqdsvlk
      421 svldrvqqgt rerrwnpdap rpavvidvdl cgliplqrit daaraisgpr pgapggilel
      481 agpatlpvlp thlpeswenf vrcsglgery pavdwdglrg dflrafqsrp rerlrtdsvn
      541 aglarfvwdv qdaggqvvlc tarkerfrgi taellaeagv pdatllvvps evsrpiaevk
      601 aeriralgvd vvavfddege sraavraefg dalpvaveip glaaqrrpda paaddaavia
      661 tfetrpsapg gpklsnthsl eelqigamrr nrlagrwavh ltegetqsiv dsivadtdra
      721 aqrtgrgaia kfgldeepdd vervlaalhh vltrkqfikg sranyrladl krdaetpvra
      781 gepidvvllg fpvkqclnrl kasgplpdla elgamarlre mqravaavyp pglhfniltd
      841 grhfrsrpaa iadayqrklr eyvdlvgigd rttvadidev aeqrlgpglp aerarriany
      901 rkllsdrlrd fditdnplrt leavhdwsms etefaphvig llreilmslv ysvpvtvpag
      961 tdrlewsaal yadiynvsdp sasaevrqgr ravlrrawht virymatmqv deefgyermf
     1021 pnrvrltlsa vrqgclgfty lggsgllpwq gtgvldprgh vaidfaisll dqgfvpvysp
     1081 llgprqpwam vpadrtqlie psnvptprgv spregvrlep dfaerarlrr k
//
LOCUS       WP_235878878             159 aa            linear   BCT 02-MAR-2025
DEFINITION  GEVED domain-containing protein [Flavobacterium davisii].
ACCESSION   WP_235878878
VERSION     WP_235878878.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 159)
  AUTHORS   Back,C.R., Sztukowska,M.N., Till,M., Lamont,R.J., Jenkinson,H.F.,
            Nobbs,A.H. and Race,P.R.
  TITLE     The Streptococcus gordonii Adhesin CshA Protein Binds Host
            Fibronectin via a Catch-Clamp Mechanism
  JOURNAL   J Biol Chem 292 (5), 1538-1549 (2017)
   PUBMED   27920201
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039776.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20009.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..159
                     /product="GEVED domain-containing protein"
                     /calculated_mol_wt=18120
     Region          22..94
                     /region_name="GEVED"
                     /note="GEVED domain; pfam20009"
                     /db_xref="CDD:466256"
     Region          <83..>149
                     /region_name="COG4733"
                     /note="Phage-related protein, tail protein J [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443767"
ORIGIN      
        1 mwrtskytty tgftssslne swtiwidynd nrqfenseiv lktaltnkey agsfsipstt
       61 kgtfrmritm ryndtsntpc gninngeied ytvqiqeqst tlqtpyayln ggiskngfya
      121 lwdtvpnans yevqlntsgt wytvgtstsy ylyilkpri
//
LOCUS       WP_235878946             390 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent monooxygenase [Saccharopolyspora karakumensis].
ACCESSION   WP_235878946
VERSION     WP_235878946.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora karakumensis
  ORGANISM  Saccharopolyspora karakumensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 390)
  AUTHORS   Schreuder,H.A., van der Laan,J.M., Swarte,M.B., Kalk,K.H., Hol,W.G.
            and Drenth,J.
  TITLE     Crystal structure of the reduced form of p-hydroxybenzoate
            hydroxylase refined at 2.3 A resolution
  JOURNAL   Proteins 14 (2), 178-190 (1992)
   PUBMED   1409567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01494.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Saccharopolyspora karakumensis"
                     /db_xref="taxon:2530386"
     Protein         1..390
                     /product="FAD-dependent monooxygenase"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /calculated_mol_wt=42094
     Region          1..386
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mrvlvsgasi agpavafwlh rngfevtvve kaasvrnggy pidvrgtale vvrrmgvlpq
       61 lqqadiqtqr ltfldadgsv aasvhpqhvv ggvdghdlev rrgdltrvlh eavrddvefv
      121 fhdsidvlde redgvrvtfr sgaqrdfdlv igadglhsrt relvfgpelg fhrylgfcfa
      181 gfttpntfgl shegimwntp gkaaalygvr dseelhgfln iarpqpsmgl lrdpdaqrel
      241 vadafadegw eisslvkamr eaddlffdtv sqihlpawsr grvalvgdaa hapsfltgqg
      301 sslalvgaym ladalathad hteaftayea atrefvelnq alvgegdaal fpttrealek
      361 rnaglrslae mppaagrpeh saltlpsprg
//
LOCUS       WP_235879097             376 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-ketoacyl synthase N-terminal-like domain-containing protein
            [Saccharopolyspora karakumensis].
ACCESSION   WP_235879097
VERSION     WP_235879097.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora karakumensis
  ORGANISM  Saccharopolyspora karakumensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 376)
  AUTHORS   Huang,W., Jia,J., Edwards,P., Dehesh,K., Schneider,G. and
            Lindqvist,Y.
  TITLE     Crystal structure of beta-ketoacyl-acyl carrier protein synthase II
            from E.coli reveals the molecular architecture of condensing
            enzymes
  JOURNAL   EMBO J 17 (5), 1183-1191 (1998)
   PUBMED   9482715
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012337.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00109.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Saccharopolyspora karakumensis"
                     /db_xref="taxon:2530386"
     Protein         1..376
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /calculated_mol_wt=39228
     Region          1..373
                     /region_name="cond_enzymes"
                     /note="Condensing enzymes; Family of enzymes that catalyze
                     a (decarboxylating or non-decarboxylating) Claisen-like
                     condensation reaction. Members are share strong structural
                     similarity, and are involved in the synthesis and
                     degradation of fatty acids, and the...; cl09938"
                     /db_xref="CDD:447866"
     Site            order(142,310)
                     /site_type="active"
                     /db_xref="CDD:238201"
ORIGIN      
        1 mgivtgygwg vepfwdgllg gkhaaslaeg ygqdrdrtaw iaaippggde sdgpstfgrs
       61 mrgaareava darargwreg rrvgllhavv lgevelwrdf ylqhggnlas rdylrlmpst
      121 pmsllmqefg fhgpamnvsa mcssgnagll takawidagi vddvvfvatd vsatpenvlh
      181 ferlgvafsd aeppevcrpf qegsrgfamg easvamilsr esggtsyahv lggamthdah
      241 hvtsidpslt ditrcfedai enagadpsgl rylnahgpgt aqcdraeatv fdslfpaeae
      301 lysvkplvgh cqgaasavei aatalgydrg tipapaavss ghprllngpt pvqggitvks
      361 slgmgghnsv vllsea
//
LOCUS       WP_235879109             240 aa            linear   BCT 02-MAR-2025
DEFINITION  acetoacetate decarboxylase family protein [Saccharopolyspora
            karakumensis].
ACCESSION   WP_235879109
VERSION     WP_235879109.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora karakumensis
  ORGANISM  Saccharopolyspora karakumensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 240)
  AUTHORS   Gerischer,U. and Durre,P.
  TITLE     Cloning, sequencing, and molecular analysis of the acetoacetate
            decarboxylase gene region from Clostridium acetobutylicum
  JOURNAL   J Bacteriol 172 (12), 6907-6918 (1990)
   PUBMED   2254264
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018066.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06314.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Saccharopolyspora karakumensis"
                     /db_xref="taxon:2530386"
     Protein         1..240
                     /product="acetoacetate decarboxylase family protein"
                     /GO_function="GO:0016829 - lyase activity [Evidence IEA]"
                     /calculated_mol_wt=26184
     Region          21..218
                     /region_name="ADC"
                     /note="Acetoacetate decarboxylase (ADC); cl01919"
                     /db_xref="CDD:445607"
ORIGIN      
        1 mhekpltnsv hvvqgervhm pvdvraatgi taqflvpagp ardtlaaagl epvtpipgrv
       61 patlgfihyl dcdlgeyhef lvalmcrqpg vrgstgvfih wlpvdqtftc eagqniwgfp
      121 keistidvst rgkrtrcevr ledrpvvale fgrgvpapsa mgamtldayt hrdgvlrrtp
      181 wtmraggtrm rpagarvelg dhpisddlrr lgfprkalft nhigeltmrf adatpissrs
//
LOCUS       WP_235879154             121 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase, partial [Streptococcus
            pneumoniae].
ACCESSION   WP_235879154
VERSION     WP_235879154.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 121)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         1..>121
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
     Region          1..>102
                     /region_name="PRK13759"
                     /note="arylsulfatase; Provisional"
                     /db_xref="CDD:237491"
ORIGIN      
        1 mvqtkqpnii livvdqmrad alslnskdkl vstptldmma svgynfenay spvpscvpar
       61 aalltgldqd ksgrvgyqde vpwnftntlp kvfnpnhsyl sqldvtyktp dlmshflpph
      121 e
//
LOCUS       WP_235879225             316 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Burkholderia sp.
            USMB20].
ACCESSION   WP_235879225
VERSION     WP_235879225.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. USMB20
  ORGANISM  Burkholderia sp. USMB20
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (residues 1 to 316)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Burkholderia sp. USMB20"
                     /db_xref="taxon:1571773"
     Protein         1..316
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=35584
     Region          1..288
                     /region_name="PRK11139"
                     /note="DNA-binding transcriptional activator GcvA;
                     Provisional"
                     /db_xref="CDD:182990"
ORIGIN      
        1 mkrlpslnal qvfdvvarhg sftraaghlc ltqgavsrqi lalesfyqfp lfkrtpkglt
       61 ltaegelllp tvresfarie evsmrlsrrr telalkvptc mmqwmlprim rfqaehpelq
      121 vqitttwehh vdfrmepfda aviyapgagp dmhaiplfee rltpvcapsl lerqplasle
      181 dllrhtllhp trdhrdwkrw ldhagaphvd strglsfetl dlathaaidg ygiaigdrtl
      241 vdesvaahrl vmpfdvslpt gmgyyfvypr gseqqqkiql fgdwiadera wrcvdtpavp
      301 psrpspspsp spklpd
//
LOCUS       WP_235879156             388 aa            linear   BCT 02-MAR-2025
DEFINITION  lanthionine synthetase LanC family protein [Streptococcus
            pneumoniae].
ACCESSION   WP_235879156
VERSION     WP_235879156.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 388)
  AUTHORS   Xie,L., Chatterjee,C., Balsara,R., Okeley,N.M. and van der
            Donk,W.A.
  TITLE     Heterologous expression and purification of SpaB involved in
            subtilin biosynthesis
  JOURNAL   Biochem Biophys Res Commun 295 (4), 952-957 (2002)
   PUBMED   12127987
REFERENCE   2  (residues 1 to 388)
  AUTHORS   Mayer,H., Bauer,H., Breuss,J., Ziegler,S. and Prohaska,R.
  TITLE     Characterization of rat LANCL1, a novel member of the lanthionine
            synthetase C-like protein family, highly expressed in testis and
            brain
  JOURNAL   Gene 269 (1-2), 73-80 (2001)
   PUBMED   11376939
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05147.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         1..388
                     /product="lanthionine synthetase LanC family protein"
                     /GO_process="GO:0031179 - peptide modification [Evidence
                     IEA]"
                     /calculated_mol_wt=44729
     Region          75..378
                     /region_name="LanC_like"
                     /note="Cyclases involved in the biosynthesis of
                     lantibiotics, and similar proteins; cd04434"
                     /db_xref="CDD:271198"
     Site            order(271,312..313)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:271198"
ORIGIN      
        1 mmshgekiqk ikqlkqipsd illntpdfss yfekynfkee aeniksylla ksmdksgrlf
       61 psnefgefvs pvsfqhgfgg vlffmnkyyv eedentvkew ltklenyeat nflhgysllf
      121 gkagflfgil dryektkery lidiskrlvd hlmrvydnis nldfalgrsg illclmkyct
      181 ivddkklanf iknnindays llesedngdi yfnnfahgrs gaayvlkaya difggsryqn
      241 hlqkfsdgis elleerlssf skldhlglsw cegvsglily lclidkerys eiiyksqlem
      301 vqqyeamgts fchglssllq ttiynknqkv eqlikrillt rsyrnddrll qfqgedgins
      361 yfdfgvgnlg iywtllgytf pfelskgd
//
LOCUS       WP_235878670             123 aa            linear   BCT 02-MAR-2025
DEFINITION  type VI secretion system baseplate subunit TssF [Flavobacterium
            davisii].
ACCESSION   WP_235878670
VERSION     WP_235878670.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium davisii
  ORGANISM  Flavobacterium davisii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 123)
  AUTHORS   Coyne,M.J., Roelofs,K.G. and Comstock,L.E.
  TITLE     Type VI secretion systems of human gut Bacteroidales segregate into
            three genetic architectures, two of which are contained on mobile
            genetic elements
  JOURNAL   BMC Genomics 17, 58 (2016)
   PUBMED   26768901
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 123)
  AUTHORS   Brunet,Y.R., Zoued,A., Boyer,F., Douzi,B. and Cascales,E.
  TITLE     The Type VI Secretion TssEFGK-VgrG Phage-Like Baseplate Is
            Recruited to the TssJLM Membrane Complex via Multiple Contacts and
            Serves As Assembly Platform for Tail Tube/Sheath Polymerization
  JOURNAL   PLoS Genet 11 (10), e1005545 (2015)
   PUBMED   26460929
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 123)
  AUTHORS   English,G., Byron,O., Cianfanelli,F.R., Prescott,A.R. and
            Coulthurst,S.J.
  TITLE     Biochemical analysis of TssK, a core component of the bacterial
            Type VI secretion system, reveals distinct oligomeric states of
            TssK and identifies a TssK-TssFG subcomplex
  JOURNAL   Biochem J 461 (2), 291-304 (2014)
   PUBMED   24779861
REFERENCE   4  (residues 1 to 123)
  AUTHORS   Zhou,Y., Tao,J., Yu,H., Ni,J., Zeng,L., Teng,Q., Kim,K.S.,
            Zhao,G.P., Guo,X. and Yao,Y.
  TITLE     Hcp family proteins secreted via the type VI secretion system
            coordinately regulate Escherichia coli K1 interaction with human
            brain microvascular endothelial cells
  JOURNAL   Infect Immun 80 (3), 1243-1251 (2012)
   PUBMED   22184413
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017733.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05947.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Flavobacterium davisii"
                     /db_xref="taxon:2906077"
     Protein         1..123
                     /product="type VI secretion system baseplate subunit TssF"
                     /calculated_mol_wt=13999
ORIGIN      
        1 mnqerikdri lrkasrlwgf nelqtessfd pivgllltac aseleklntd ledsrsriie
       61 rvldlmfpee vsgvtpssai vqlfptennv kiskynrfkg tkkitniynp tevlqkevfl
      121 vpq
//
LOCUS       WP_235879338            1032 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramoyl-L-alanine amidase [Burkholderia sp. USMB20].
ACCESSION   WP_235879338
VERSION     WP_235879338.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. USMB20
  ORGANISM  Burkholderia sp. USMB20
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (residues 1 to 1032)
  AUTHORS   Cheng,X., Zhang,X., Pflugrath,J.W. and Studier,F.W.
  TITLE     The structure of bacteriophage T7 lysozyme, a zinc amidase and an
            inhibitor of T7 RNA polymerase
  JOURNAL   Proc Natl Acad Sci U S A 91 (9), 4034-4038 (1994)
   PUBMED   8171031
REFERENCE   2  (residues 1 to 1032)
  AUTHORS   Wang,X., Wilkinson,B.J. and Jayaswal,R.K.
  TITLE     Sequence analysis of a Staphylococcus aureus gene encoding a
            peptidoglycan hydrolase activity
  JOURNAL   Gene 102 (1), 105-109 (1991)
   PUBMED   1677905
REFERENCE   3  (residues 1 to 1032)
  AUTHORS   Potvin,C., Leclerc,D., Tremblay,G., Asselin,A. and Bellemare,G.
  TITLE     Cloning, sequencing and expression of a Bacillus bacteriolytic
            enzyme in Escherichia coli
  JOURNAL   Mol Gen Genet 214 (2), 241-248 (1988)
   PUBMED   3070348
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013661.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01510.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Burkholderia sp. USMB20"
                     /db_xref="taxon:1571773"
     Protein         1..1032
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /EC_number="3.5.1.28"
                     /GO_function="GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=107177
     Region          234..396
                     /region_name="AmpD"
                     /note="N-acetyl-anhydromuramyl-L-alanine amidase AmpD
                     [Cell wall/membrane/envelope biogenesis]; COG3023"
                     /db_xref="CDD:442259"
     Region          425..637
                     /region_name="NLPC_P60"
                     /note="NlpC/P60 family; cl21534"
                     /db_xref="CDD:473902"
     Region          655..780
                     /region_name="Peptidase_C70"
                     /note="Papain-like cysteine protease AvrRpt2; pfam12385"
                     /db_xref="CDD:403550"
ORIGIN      
        1 msddagfrla gerrgftwpr prklstvera alrailsanp ataslmlllp vamrnglsvs
       61 igagagagle sggagavgli fdangddigv fvsgeldfgy ivsasltgqi sllrghiddf
      121 agtgttvgvm vgeapaggis alfnargefv gvtlsagvsv gspvsvfvgv sraaagtiat
      181 ssssslawar glsadpeayg idtppysddd aaaepsatas alalgarens lvtrtaaspn
      241 fdegrgskti driiihiadv ptvqqvvntf tnasskvssh ylvgqegevv qfvseadtaw
      301 hckgsnqrsi giehiavkrg gadyprrngt vqhfdalapt qlqyetsaal vaslcdkyql
      361 pinrttimgh readtstght acpdgnwdwd yfmrlvtsrt cqpqaagqal glaarglgdd
      421 ipldpgvggl sigtdaleig diilsttgnp gsgviragsg aevshamlyv gqggqvieai
      481 pggvqlrpla daladarlav afrvpgltdt qrqqvadaaa ryldrgfnyv glvrcgsyli
      541 drhacdllsg daaercrrfv grielgegad tdnffcsqlv aqsfqdagrp ivsvpphwvp
      601 pgdlaslstg tmapgtlayv ghlkapipsr gffgtsqals vasgaaralg addwsvnwde
      661 vqltpqptdm gcwataasmv igwrdnqsvd ptllarcisl erqmrdglap aevagfagvs
      721 tltvepnacf apegfrrlle angpiwvaev vrapvnffha vvvtgmyrsg dayfvritdp
      781 ldrvvgtpgh pgartvppth stgsryimty edfvseyeaa agigviqlmh sggtfghtin
      841 rgsaagagya lgveppaagg efgfgvsltr rtesrdgrsy dlaqlaglvq panalaggag
      901 qprmagqrit lddwpyidgp sgrtsapvsi dwawqggavg dvtiaadhgq mldgwsafvr
      961 adigrgsgta erasvklrit ttfrhageed qvgvtevtln gdgrfqivhg adgapplpas
     1021 gtqpaprelq pa
//
LOCUS       WP_235879402             128 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3885 domain-containing protein [Robertmurraya siralis].
ACCESSION   WP_235879402
VERSION     WP_235879402.1
KEYWORDS    RefSeq.
SOURCE      Robertmurraya siralis
  ORGANISM  Robertmurraya siralis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Robertmurraya.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024421.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13021.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Robertmurraya siralis"
                     /db_xref="taxon:77777"
     Protein         1..128
                     /product="DUF3885 domain-containing protein"
                     /calculated_mol_wt=15264
     Region          76..111
                     /region_name="DUF3885"
                     /note="Domain of unknown function (DUF3885); pfam13021"
                     /db_xref="CDD:404043"
ORIGIN      
        1 mqqkicpyvf eeeeeakdyc tsqfsllcrk rdirypllle aicnqdfpsl kpnlrhrdsv
       61 yspnvffina skdiiffiyd drgceviakd fetirplyek ytewveghrq eeqykgdmin
      121 eikdqamd
//
LOCUS       WP_235879415             140 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF2800 domain-containing protein [Robertmurraya].
ACCESSION   WP_235879415
VERSION     WP_235879415.1
KEYWORDS    RefSeq.
SOURCE      Robertmurraya
  ORGANISM  Robertmurraya
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022379.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10926.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Robertmurraya"
                     /db_xref="taxon:2837507"
     Protein         1..140
                     /product="DUF2800 domain-containing protein"
                     /calculated_mol_wt=15800
     Region          <1..119
                     /region_name="Cas4_I-A_I-B_I-C_I-D_II-B"
                     /note="CRISPR/Cas system-associated protein Cas4; cl00641"
                     /db_xref="CDD:469855"
ORIGIN      
        1 mppllpdsei eevlsklsdl tkwaneiiay atdtavnhgk ewhgfkvveg rsirkykdee
       61 avaeaakang ykdiyrqsli nltemqklmg kkkfeqilgg lihkppgkpt lvpnsdkrqa
      121 mnisnvknef neiteeleye
//
LOCUS       WP_235879361             361 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Burkholderia sp.
            USMB20].
ACCESSION   WP_235879361
VERSION     WP_235879361.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. USMB20
  ORGANISM  Burkholderia sp. USMB20
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Burkholderia sp. USMB20"
                     /db_xref="taxon:1571773"
     Protein         1..361
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=39984
     Region          <137..338
                     /region_name="PRK09685"
                     /note="DNA-binding transcriptional activator FeaR;
                     Provisional"
                     /db_xref="CDD:236612"
ORIGIN      
        1 mnddplhtai ppgrlllppe rpvlapgivh ssfsvhgdar rsllawqerm spvydilpss
       61 kqaedtfdas msrytienls ifdfrtgpnl avrslgrvst esvrdvsfsi ylegspgqfl
      121 ggkprsdaph vphvpsilal dmdqpctirs fhsrilllfv pralveksfp daaslhgrwi
      181 hatdpltrml iehvvalnkt ivglskdeah rslltaveli vaafcrqagl agnaraavra
      241 avygqvrrhv eanlhdpnls pdsvlaslnl srasvyrife hegglaayir nrrlrmaade
      301 lvrfphvevq dvasglgfnd assftrafrr afdisprelh eyaplfqhgd tkrerftkrq
      361 g
//
LOCUS       WP_235879518             405 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: glycosyltransferase [Robertmurraya].
ACCESSION   WP_235879518
VERSION     WP_235879518.1
KEYWORDS    RefSeq.
SOURCE      Robertmurraya
  ORGANISM  Robertmurraya
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024831.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13439.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Robertmurraya"
                     /db_xref="taxon:2837507"
     Protein         1..405
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=46566
     Region          5..399
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mdlkkvcilv aehpfldsri frkeakslyd agydvtmivp rkkgylfdin gqpftnkfle
       61 qtftyegini vtysfensrs ylnkvleeed twekdafpnp ittlameqda diyhaheyls
      121 lfagigtkrl mkktkgkdvk liydshelvp dpldsrysep akkklkekll imlkevdhvi
      181 tvsdsiknwy hteipnlpvd vvynspplaa aptkktakns fticyegsie aqkgnfkkii
      241 giseictrvm knfqfrvigg prygetihip kslkntiqlt gwveyqdiqk hmadvdigwi
      301 dfddlansln rsyalpnkff sylnngvpil vnkapemerf vkqhkcghvv ekahatakdf
      361 anaiihlhkq kklleemgqk sraimemsys wehmqkrlla vyenl
//
LOCUS       WP_235879532             333 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase [Robertmurraya siralis].
ACCESSION   WP_235879532
VERSION     WP_235879532.1
KEYWORDS    RefSeq.
SOURCE      Robertmurraya siralis
  ORGANISM  Robertmurraya siralis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Robertmurraya.
REFERENCE   1  (residues 1 to 333)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 333)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Robertmurraya siralis"
                     /db_xref="taxon:77777"
     Protein         1..333
                     /product="phosphotransferase"
                     /calculated_mol_wt=39586
     Region          17..294
                     /region_name="CotI"
                     /note="Spore coat protein CotI/CotS, protein kinase
                     superfamily [Cell cycle control, cell division, chromosome
                     partitioning]; COG5881"
                     /db_xref="CDD:444583"
ORIGIN      
        1 mkvmevtind qgdglymdrl lfylqdqlpf qitslqplrn hvflleskdf tkyivkgyps
       61 yrrlrtqvni tmdlkkhgfp htysfynltn gspllfeqtf ygiieylpps ahsftyeghd
      121 nrvealallh qfhevgrvlv ekyngrlkkq hllnkwrert iaflnqisfi kffvqkeiie
      181 eilqwadwsf rgleqedgai dcptvlhgdl ahhnflrieg eelylidfdl itigdrsldy
      241 lqfanrilph idwslerlvk lelirpflhs kfflyglafp sdifrewnrl irekhynnpi
      301 ivrqvldltv gqffererfi kelklalsvl sqk
//
LOCUS       WP_235879557             161 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: YkyB family protein [Bacillaceae].
ACCESSION   WP_235879557
VERSION     WP_235879557.1
KEYWORDS    RefSeq.
SOURCE      Bacillaceae
  ORGANISM  Bacillaceae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025541.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14177.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Bacillaceae"
                     /db_xref="taxon:186817"
     Protein         1..161
                     /product="YkyB family protein"
                     /calculated_mol_wt=18703
     Region          19..135
                     /region_name="YkyB"
                     /note="YkyB-like protein; pfam14177"
                     /db_xref="CDD:464098"
ORIGIN      
        1 mkskrkryqn drhidleftv enlskaifvv nkhaktavep kflyelkkka lekmleegka
       61 kklglhfvrt pkfsiqsstv liscgaylfh lppkkedfqk lkhlghlndd yrnpkttnls
      121 lnrakallia ytglketkqt npfffqhlns niiitksyre r
//
LOCUS       WP_235879539             693 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Robertmurraya
            siralis].
ACCESSION   WP_235879539
VERSION     WP_235879539.1
KEYWORDS    RefSeq.
SOURCE      Robertmurraya siralis
  ORGANISM  Robertmurraya siralis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Robertmurraya.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Robertmurraya siralis"
                     /db_xref="taxon:77777"
     Protein         1..693
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=79321
     Region          179..303
                     /region_name="GAF_2"
                     /note="GAF domain; pfam13185"
                     /db_xref="CDD:433019"
     Region          <192..662
                     /region_name="GAF"
                     /note="GAF domain [Signal transduction mechanisms];
                     COG2203"
                     /db_xref="CDD:441805"
     Region          <631..692
                     /region_name="CitB"
                     /note="DNA-binding response regulator, NarL/FixJ family,
                     contains REC and HTH domains [Signal transduction
                     mechanisms, Transcription]; COG2197"
                     /db_xref="CDD:441799"
ORIGIN      
        1 mgvektlqnl qdgyahlldl mvvlvdekrl lktkisypkn gneeflaqqm iasipaltki
       61 kstiyvdvlp glkvlaapii tnsqerlyli ggmlvedeif dalkkylqeh kegavflhnl
      121 qsvkvvsnde karilatfqq lsssiqslyq nqvyvdafqn kilnakwave nitderfnld
      181 vliqqfknln pdlsfvgiav hkeeeryliq hfagqsmdrv lgievalgeg flgqvimtee
      241 ysywthiqed prlvtyrkyg lsprslfcqp ikvgnqtkgl lfggsekeee lfdpvdisil
      301 asfigvfmvq qslkessnhh flqlstfnei fsvmtkvnnv krvlyilidm gmnilsgsfa
      361 svlfkeiqvq nklsllsrgm kneqlsqygr dlgkrhfsnk lvektegmfh eltngelvye
      421 mpitfrself gvlsigirsk devkpyipfl sslgiaggis iyllqkeltq qsdeklvnll
      481 trlleknese kyersvearr liagfakeig ldsneisale nactliyyeq emlldaisdk
      541 etmelmqhyy raqewkkvkn dlvmllfiil drvgekiaqp ikqqlqndpl yktfveweer
      601 nymaeieipf gqendmelga eqeeikkkln lsnremevlh qvlkglnnre iaqslfisdh
      661 tvknhmtnil qklgvtdrsq aiakvyqmgy tpq
//
LOCUS       WP_235879578              87 aa            linear   BCT 02-MAR-2025
DEFINITION  YolD-like family protein [Robertmurraya siralis].
ACCESSION   WP_235879578
VERSION     WP_235879578.1
KEYWORDS    RefSeq.
SOURCE      Robertmurraya siralis
  ORGANISM  Robertmurraya siralis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Robertmurraya.
REFERENCE   1  (residues 1 to 87)
  AUTHORS   Makarova,K.S., Anantharaman,V., Grishin,N.V., Koonin,E.V. and
            Aravind,L.
  TITLE     CARF and WYL domains: ligand-binding regulators of prokaryotic
            defense systems
  JOURNAL   Front Genet 5, 102 (2014)
   PUBMED   24817877
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 87)
  AUTHORS   Permina,E.A., Mironov,A.A. and Gelfand,M.S.
  TITLE     Damage-repair error-prone polymerases of eubacteria: association
            with mobile genome elements
  JOURNAL   Gene 293 (1-2), 133-140 (2002)
   PUBMED   12137951
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020438.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08863.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Robertmurraya siralis"
                     /db_xref="taxon:77777"
     Protein         1..87
                     /product="YolD-like family protein"
                     /calculated_mol_wt=9810
     Region          <14..83
                     /region_name="YolD"
                     /note="YolD-like protein; pfam08863"
                     /db_xref="CDD:430270"
ORIGIN      
        1 mmlakpkkvk kaarpkrdef eledlanqli eahnegievi lhiwqgdpkr ckvskldgqt
       61 qmvhievgyn tekvkfidim kvesapg
//
LOCUS       WP_235879583             273 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MBL fold metallo-hydrolase [Robertmurraya].
ACCESSION   WP_235879583
VERSION     WP_235879583.1
KEYWORDS    RefSeq.
SOURCE      Robertmurraya
  ORGANISM  Robertmurraya
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 273)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 273)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Robertmurraya"
                     /db_xref="taxon:2837507"
     Protein         1..273
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=31380
     Region          30..199
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(68,70,72..73,142..143,161,199)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 mfvkkrsikg ekgnvryieg lvtfhnvhln vycfeldgvl idtgaqvlln eftpffaest
       61 leqvvithyh edhtggaayl hsklklpiyq nemtieqcak kadypkyrkf fwgtrkpyha
      121 rplsktfssr tatwdviatp ghssdhlsfl nretgqlfsg dlyvtaktkl vlreenipli
      181 iqsietvlty dfeemfccha gfvkdgrkal tkklhylqel qgktlalrkq glteyeiqae
      241 lfskkypitf fssgewdsih iirsilrena ldk
//
LOCUS       WP_235879721             286 aa            linear   BCT 02-MAR-2025
DEFINITION  matrixin family metalloprotease [Polyangium aurulentum].
ACCESSION   WP_235879721
VERSION     WP_235879721.1
KEYWORDS    RefSeq.
SOURCE      Polyangium aurulentum
  ORGANISM  Polyangium aurulentum
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae; Polyangium.
REFERENCE   1  (residues 1 to 286)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
REFERENCE   2  (residues 1 to 286)
  AUTHORS   Gooley,P.R., O'Connell,J.F., Marcy,A.I., Cuca,G.C., Salowe,S.P.,
            Bush,B.L., Hermes,J.D., Esser,C.K., Hagmann,W.K., Springer,J.P. et
            al.
  TITLE     The NMR structure of the inhibited catalytic domain of human
            stromelysin-1
  JOURNAL   Nat Struct Biol 1 (2), 111-118 (1994)
   PUBMED   7656014
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00413.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Polyangium aurulentum"
                     /db_xref="taxon:2567896"
     Protein         1..286
                     /product="matrixin family metalloprotease"
                     /EC_number="3.4.24.-"
                     /GO_component="GO:0031012 - extracellular matrix [Evidence
                     IEA]"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=30330
     Region          104..271
                     /region_name="ZnMc_MMP_like_1"
                     /note="Zinc-dependent metalloprotease; MMP_like sub-family
                     1. A group of bacterial, archaeal, and fungal
                     metalloproteinase domains similar to matrix
                     metalloproteinases and astacin; cd04279"
                     /db_xref="CDD:239806"
     Site            order(206..207,210,216)
                     /site_type="active"
                     /db_xref="CDD:239806"
ORIGIN      
        1 mkklhmlygn iailasvavl aggcvaesap edvgdvdsag mswnefldvv yqepgqdlfv
       61 vngdetiegw drlqqfyvdy vqngglivhq sggadakwda qtalnitycv ssnfgsrynt
      121 vvqamatatg awegaanvnf vhlsqydsac sanqkgvifd vrpvnvggqy laraffpnqs
      181 rssrnvlidn saftsqgisl dgvlrhelgh algfrhehtr peagacyeds swraltpyds
      241 gsvmhypqcn gtnswalnlt stdktgaaal ygapgggtgg ggkgnk
//
LOCUS       WP_235879753             628 aa            linear   BCT 02-MAR-2025
DEFINITION  radical SAM protein [Polyangium aurulentum].
ACCESSION   WP_235879753
VERSION     WP_235879753.1
KEYWORDS    RefSeq.
SOURCE      Polyangium aurulentum
  ORGANISM  Polyangium aurulentum
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae; Polyangium.
REFERENCE   1  (residues 1 to 628)
  AUTHORS   Benjdia,A., Leprince,J., Guillot,A., Vaudry,H., Rabot,S. and
            Berteau,O.
  TITLE     Anaerobic sulfatase-maturating enzymes: radical SAM enzymes able to
            catalyze in vitro sulfatase post-translational modification
  JOURNAL   J Am Chem Soc 129 (12), 3462-3463 (2007)
   PUBMED   17335281
REFERENCE   2  (residues 1 to 628)
  AUTHORS   Berteau,O., Guillot,A., Benjdia,A. and Rabot,S.
  TITLE     A new type of bacterial sulfatase reveals a novel maturation
            pathway in prokaryotes
  JOURNAL   J Biol Chem 281 (32), 22464-22470 (2006)
   PUBMED   16766528
REFERENCE   3  (residues 1 to 628)
  AUTHORS   Sofia,H.J., Chen,G., Hetzler,B.G., Reyes-Spindola,J.F. and
            Miller,N.E.
  TITLE     Radical SAM, a novel protein superfamily linking unresolved steps
            in familiar biosynthetic pathways with radical mechanisms:
            functional characterization using new analysis and information
            visualization methods
  JOURNAL   Nucleic Acids Res 29 (5), 1097-1106 (2001)
   PUBMED   11222759
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015983.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04055.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Polyangium aurulentum"
                     /db_xref="taxon:2567896"
     Protein         1..628
                     /product="radical SAM protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0051539 - 4 iron, 4 sulfur cluster
                     binding [Evidence IEA]"
                     /calculated_mol_wt=71147
     Region          54..555
                     /region_name="MoaA2"
                     /note="C-terminal domain of the GTP 3',8'-cyclase MoaA,
                     radical SAM superfamily (molybdenum cofactor biosynthesis)
                     [Coenzyme transport and metabolism]; COG1964"
                     /db_xref="CDD:441567"
ORIGIN      
        1 mfsvrslekf vtasanrlwp lmqqlnalgp epkpfqprws dkpiprgkqr skpplgwprq
       61 tdslcptcvk earaeilrgd adwsklisdk pgeikarive rdgqirmeke cpkhgmfsdv
      121 lsidpkfler ieglfqgrdv emtpdkihnh gsstikygrg svltvdltnr cnmmcdpcfm
      181 danqvgyvhe lsweditqil ddaadvrprr qmsiqfsgge ptlspyflda iryarkkgyf
      241 avqcatnglr faqepgfakq ckeaglrmay lqfdgvtnea nshrkignly dvklraieel
      301 aaagidvilv vtivngvndh mvgpiiqfai enadkvtvvs fqpvsftgrd edisdelrek
      361 qrytlshlah dvarqtgvtn plrdwfplsa lspfgdvvdl ldgpdkdfgq lncgchpncg
      421 vgtilfvnkr tkqmipllef ldmegvlrdf rsifdagrgq nwtkaqvvts ilrhyrpeka
      481 ppgfdlktll kqfmsqtgaa hagesdakey ewrvlfvagm wfqdlfnydf rrtemciipy
      541 gtqmgeisfc ayntgagwrn vlekmranat vaewykkygr hpiyaknkdl plpefdnait
      601 vkehelarke reakeqrrka vrlpivps
//
LOCUS       WP_235879765             741 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Polyangium aurulentum].
ACCESSION   WP_235879765
VERSION     WP_235879765.1
KEYWORDS    RefSeq.
SOURCE      Polyangium aurulentum
  ORGANISM  Polyangium aurulentum
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae; Polyangium.
REFERENCE   1  (residues 1 to 741)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 741)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 741)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 741)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Polyangium aurulentum"
                     /db_xref="taxon:2567896"
     Protein         1..741
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=80626
     Region          8..384
                     /region_name="MalE"
                     /note="Maltose-binding periplasmic protein MalE
                     [Carbohydrate transport and metabolism]; COG2182"
                     /db_xref="CDD:441785"
     Region          468..724
                     /region_name="UgpA"
                     /note="ABC-type sugar transport system, permease component
                     [Carbohydrate transport and metabolism]; COG1175"
                     /db_xref="CDD:440788"
ORIGIN      
        1 mtqakqylaa lvalcayvlv srpasaepir lwhayrgdee kaleeivarw kgepvellal
       61 padalkskls saislgdgpd lfidahnrlg eyklrklvsp agdaleeday agpsleamrv
      121 dgvaygvpis qksvalyvnt dlveevpedl egiaalkdkl ppgvfplaye sqnfyfhagl
      181 lhaaggkvit akdefgfvgp eaaksleltl wlqssgtipe eadgalvtnl frsgraafai
      241 sgpwlatdla gatslhyrva plpkvratgr yleplltvea imlspkgaar nevralarhi
      301 aspegakira erahtlparq daalpegdas lrafaeqakr tipmstspam davwepaqka
      361 irkvvrrdal petalneakk rfddvrrplp epasktpglv vlgvllvlga lhlvdkardp
      421 elrpafkksl payayvvpav lalgvlvllp lvigaatslf agrdehlryv glthfidilt
      481 arggpllatg sfylvllvtv lwtvmnvffh vfigvslalv lsrpmlklrg lyrvlliipw
      541 avpsyvtala wkgmfhrqfg avtglilwln rslgldmepi awfsrfstaf tanlstniwl
      601 gfpfmmvvtl galtavpddv leaakvdgat rwqrlrlvtl pmirpslapa vimgaiwtfn
      661 mfnviylvsg gepdgtteil vseayrwaft reaqygyaaa ysvliflllm gatrlldwrr
      721 erevrrlanl avpvvaatee a
//
LOCUS       WP_235879794              76 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Polyangium aurulentum].
ACCESSION   WP_235879794
VERSION     WP_235879794.1
KEYWORDS    RefSeq.
SOURCE      Polyangium aurulentum
  ORGANISM  Polyangium aurulentum
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae; Polyangium.
REFERENCE   1  (residues 1 to 76)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 76)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Polyangium aurulentum"
                     /db_xref="taxon:2567896"
     Protein         1..76
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=8272
     Region          <4..53
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(4,7,30,39)
                     /site_type="active"
                     /db_xref="CDD:271177"
ORIGIN      
        1 mgwhvlrhtf ashlamkeva lkaiqellgh ttidmtmrya hlspevgrda vllldgpvrd
       61 drsghdlgti gsrtak
//
LOCUS       WP_235879885             449 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma 54-interacting transcriptional regulator [Polyangium
            aurulentum].
ACCESSION   WP_235879885
VERSION     WP_235879885.1
KEYWORDS    RefSeq.
SOURCE      Polyangium aurulentum
  ORGANISM  Polyangium aurulentum
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae; Polyangium.
REFERENCE   1  (residues 1 to 449)
  AUTHORS   Studholme,D.J. and Dixon,R.
  TITLE     Domain architectures of sigma54-dependent transcriptional
            activators
  JOURNAL   J Bacteriol 185 (6), 1757-1767 (2003)
   PUBMED   12618438
REFERENCE   2  (residues 1 to 449)
  AUTHORS   Chaney,M., Grande,R., Wigneshweraraj,S.R., Cannon,W., Casaz,P.,
            Gallegos,M.T., Schumacher,J., Jones,S., Elderkin,S., Dago,A.E.,
            Morett,E. and Buck,M.
  TITLE     Binding of transcriptional activators to sigma 54 in the presence
            of the transition state analog ADP-aluminum fluoride: insights into
            activator mechanochemical action
  JOURNAL   Genes Dev 15 (17), 2282-2294 (2001)
   PUBMED   11544185
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00158.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Polyangium aurulentum"
                     /db_xref="taxon:2567896"
     Protein         1..449
                     /product="sigma 54-interacting transcriptional regulator"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008134 - transcription factor binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=48567
     Region          25..115
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cd00060"
                     /db_xref="CDD:438714"
     Site            order(48..49,63..64,66,85..86)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:438714"
     Region          <125..442
                     /region_name="RocR"
                     /note="RocR-type transcriptional regulator, contains PAS,
                     AAA-type ATPase, and DNA-binding Fis domains
                     [Transcription, Signal transduction mechanisms]; COG3829"
                     /db_xref="CDD:443041"
ORIGIN      
        1 mttihdrpvt vttirsdave lpdlrvvvsp psappveatl glrplvfgss pscdvlvpdp
       61 lvsrrhcqll leergvvlrd lgskngtfmg nmrifeilmp pdasatigtt tivlrasgrp
      121 avvplstsar fgqalgaala mralfaqler aaaasetill lgesgtgkel laravhdasp
      181 rrdcpfvvfd csavapslle aelfghakga ftgaasarag lleqahggtl fideigelpl
      241 elqpkllral esrqcrrvgs tqytpfdari vaathrdlqg rvaagtfred lyyrlavvea
      301 mvpplrerke dipllverfl aaqsppltla dlppnamdll kahhwpgnvr elrntvtrlv
      361 lfphmveqai trtaprrvgg aadelgqiia lplreardmv veqferkyit aklrehggnv
      421 sraaaamgvs rqflhrlmer ygtprdggg
//
LOCUS       WP_235879890             795 aa            linear   BCT 02-MAR-2025
DEFINITION  SpoIIE family protein phosphatase [Polyangium aurulentum].
ACCESSION   WP_235879890
VERSION     WP_235879890.1
KEYWORDS    RefSeq.
SOURCE      Polyangium aurulentum
  ORGANISM  Polyangium aurulentum
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae; Polyangium.
REFERENCE   1  (residues 1 to 795)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Polyangium aurulentum"
                     /db_xref="taxon:2567896"
     Protein         1..795
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=87673
     Region          <253..>329
                     /region_name="dCache_1"
                     /note="Cache domain; pfam02743"
                     /db_xref="CDD:460673"
     Region          302..421
                     /region_name="HK_sensor"
                     /note="Sensor domains of Histidine Kinase receptors;
                     cl38916"
                     /db_xref="CDD:365792"
     Region          404..794
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
ORIGIN      
        1 mssdarenpg vprlrgvlar fkqfntkfll vtgvsvllga vlnmlvarqg ihklsaestr
       61 eieaglnvan reyltnhlgd taqhvnfefh haftdielva diaqtvidhd gelgnmhetl
      121 aslpylkdkf aykaksdggg dwqqnaegep avisiwgyml dngqirpeaq raadrtaymd
      181 fllpsfkrrg adklqiyavg ppahpyvrla pyidlagifd qtypghnnkn fyeffypgll
      241 kswegwmgep ggldarksqv tlwppyndag gggliltifh plwekdrkqi agaigldltl
      301 nqivayvrdv klantgfafl aqadgnviav nesgqkqlgl qekaeqqgla llkrllkdst
      361 epqvasielp edetvqyrdn vmiggephvm vlkrlapfnt wsneriatey wtlgfvvpkk
      421 eiyaslyaaq raiedsrtsi vtsqafiaig sflvlmagvf lisrrmtgal valsggaarm
      481 regdygvrva vtsddeigql svafnemaae iqahtqnlee lvkartkele eankeimsln
      541 aqlaqenlrl gaelnvarql qlmvlppaqe lkeikdldia gymspadevg gdyydvlrgn
      601 gvvkigigdv tghglesgvl mlmvqtavrt llasnetdpq rflsivnkvi yqniqrissd
      661 knltlslmdy sdgvlrltgq heeviivrtd gtlervdttg lglpvgmded isdflsniei
      721 klaigdvvil ftdgvteaer tdtkqygver lcevvlrnhd ktsqeikdav iddvmahign
      781 nkiydditvl vikrl
//
LOCUS       WP_235879930             149 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6573 family protein [Polyangium aurulentum].
ACCESSION   WP_235879930
VERSION     WP_235879930.1
KEYWORDS    RefSeq.
SOURCE      Polyangium aurulentum
  ORGANISM  Polyangium aurulentum
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae; Polyangium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042459.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20213.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Polyangium aurulentum"
                     /db_xref="taxon:2567896"
     Protein         1..149
                     /product="DUF6573 family protein"
                     /calculated_mol_wt=16394
     Region          20..149
                     /region_name="DUF6573"
                     /note="Family of unknown function (DUF6573); pfam20213"
                     /db_xref="CDD:466364"
ORIGIN      
        1 msgddedidw eqvereefge etgnevrpvf isiysramal adgtlvdate lakeagikap
       61 valtrsvwek yvelspaaek agndktgrlw dvvwmfrcaa lqqpdeseir yqlhvvtdsi
      121 qpslvelkam igpgddgeav itillpeed
//
LOCUS       WP_235879936             766 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase [Polyangium aurulentum].
ACCESSION   WP_235879936
VERSION     WP_235879936.1
KEYWORDS    RefSeq.
SOURCE      Polyangium aurulentum
  ORGANISM  Polyangium aurulentum
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae; Polyangium.
REFERENCE   1  (residues 1 to 766)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Polyangium aurulentum"
                     /db_xref="taxon:2567896"
     Protein         1..766
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=80620
     Region          347..662
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
     Site            order(353,394,503,594..595)
                     /site_type="active"
                     /db_xref="CDD:293732"
     Site            order(353,394,503,595)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293732"
ORIGIN      
        1 mvslsaraga ialafvgaaf msgcsscngg srdapgkpaa sgsaaapplp ppgrtiadiv
       61 aslagcdieh rgvlldagtd amtgrfawtg vaplgvdsve hdastwarvs grtmrlffvl
      121 peaspifvsa rsmgiasraa tvslddqplg tlnfnrnqir vastgattlp vdpglhtltf
      181 rfmgrardad ayadldwirv gvpdenpaty gpptlrdvvs paaalsgvph rsialrgpga
      241 vrcalrlppg ahlrtaiglq gageadasir ilrdgqkpvd vsaqhvigge katwseidvp
      301 laphtgslvh lelraestpq garvlfgdpv itlpappppa takaravviv vlngvereel
      361 ppwhgaptph lpalselalt gttfhrhrap ttypaavlgs mltampprgh tvtdpgarmp
      421 asqtmlgtia hdaslraamf tgvpatfksf gfgtgwehfa efppqgndla ttpieaaatw
      481 mtnvlrqape arllavvhsr gghppwdvta reqatlapnn ytgvidprrg aqqiasarkr
      541 gkkdkdvfsa qdkerirale tvaltgqdra igslvsalkt agiwestvfv vtgdvgsgad
      601 alyaegqels eklltlplyv rfpdarygga nvhlptevwd itqtalsalg iafsrpglgr
      661 dlsgvasgle dpyeepqiat lddrfsarwg elimtgryda apslcdleld ptcafnrret
      721 mplamqalfr rivardvata apaskrepat iepetasslr vwgamd
//
LOCUS       WP_235879944             518 aa            linear   BCT 02-MAR-2025
DEFINITION  porin [Polyangium aurulentum].
ACCESSION   WP_235879944
VERSION     WP_235879944.1
KEYWORDS    RefSeq.
SOURCE      Polyangium aurulentum
  ORGANISM  Polyangium aurulentum
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae; Polyangium.
REFERENCE   1  (residues 1 to 518)
  AUTHORS   Siehnel,R.J., Egli,C. and Hancock,R.E.
  TITLE     Polyphosphate-selective porin OprO of Pseudomonas aeruginosa:
            expression, purification and sequence
  JOURNAL   Mol Microbiol 6 (16), 2319-2326 (1992)
   PUBMED   1406271
REFERENCE   2  (residues 1 to 518)
  AUTHORS   Hancock,R.E., Egli,C., Benz,R. and Siehnel,R.J.
  TITLE     Overexpression in Escherichia coli and functional analysis of a
            novel PPi-selective porin, oprO, from Pseudomonas aeruginosa
  JOURNAL   J Bacteriol 174 (2), 471-476 (1992)
   PUBMED   1370289
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019042.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07396.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Polyangium aurulentum"
                     /db_xref="taxon:2567896"
     Protein         1..518
                     /product="porin"
                     /calculated_mol_wt=56092
     Region          48..488
                     /region_name="OprP"
                     /note="Phosphate-selective porin [Inorganic ion transport
                     and metabolism]; COG3746"
                     /db_xref="CDD:442960"
ORIGIN      
        1 mkappppppa grtqppitpp psppqpfpie adapprrdqk ralagfqggv flrdaaddir
       61 iylrgrlhld fhsffgagar elggedggvl lsprffarra rielggelfr rwfflfgldf
      121 ggqtitnptg adglsatpvg qppfvasdry apiqsvgata llanayidya vlpqlhftlg
      181 qhqapfslen rtsneatswm erslpirgfv qpnakemgly lwgdlnavkn lsyelgvflg
      241 dgpnrpqvda ypdwigrifs rplakggega leklqvgvsa hygsrdpkyv aydypaitta
      301 qgwtlwdpry rdsrdrlvhv ipsgaqrrig gelrlpidry elrseayyvv ngtreahdgf
      361 esstterlgr vkgvgwyvql sawplgdafv tgdpgfsrpp rldltrdppp dkrglevlai
      421 vggvnadydg airggsydpr tpgapggpat aitayqlglg anywysrylr atvnytayvt
      481 pgsgaggnla lvpgnllaga gststwmhel garlaaaf
//
LOCUS       WP_235880002             410 aa            linear   BCT 02-MAR-2025
DEFINITION  HRDC domain-containing protein [Polyangium aurulentum].
ACCESSION   WP_235880002
VERSION     WP_235880002.1
KEYWORDS    RefSeq.
SOURCE      Polyangium aurulentum
  ORGANISM  Polyangium aurulentum
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae; Polyangium.
REFERENCE   1  (residues 1 to 410)
  AUTHORS   Huang,L., Hua,X., Lu,H., Gao,G., Tian,B., Shen,B. and Hua,Y.
  TITLE     Three tandem HRDC domains have synergistic effect on the RecQ
            functions in Deinococcus radiodurans
  JOURNAL   DNA Repair (Amst) 6 (2), 167-176 (2007)
   PUBMED   17085080
REFERENCE   2  (residues 1 to 410)
  AUTHORS   Wu,L., Chan,K.L., Ralf,C., Bernstein,D.A., Garcia,P.L., Bohr,V.A.,
            Vindigni,A., Janscak,P., Keck,J.L. and Hickson,I.D.
  TITLE     The HRDC domain of BLM is required for the dissolution of double
            Holliday junctions
  JOURNAL   EMBO J 24 (14), 2679-2687 (2005)
   PUBMED   15990871
REFERENCE   3  (residues 1 to 410)
  AUTHORS   Liu,Z., Macias,M.J., Bottomley,M.J., Stier,G., Linge,J.P.,
            Nilges,M., Bork,P. and Sattler,M.
  TITLE     The three-dimensional structure of the HRDC domain and implications
            for the Werner and Bloom syndrome proteins
  JOURNAL   Structure 7 (12), 1557-1566 (1999)
   PUBMED   10647186
REFERENCE   4  (residues 1 to 410)
  AUTHORS   Morozov,V., Mushegian,A.R., Koonin,E.V. and Bork,P.
  TITLE     A putative nucleic acid-binding domain in Bloom's and Werner's
            syndrome helicases
  JOURNAL   Trends Biochem Sci 22 (11), 417-418 (1997)
   PUBMED   9397680
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012779.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00570.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Polyangium aurulentum"
                     /db_xref="taxon:2567896"
     Protein         1..410
                     /product="HRDC domain-containing protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /calculated_mol_wt=44083
     Region          15..398
                     /region_name="Rnd"
                     /note="Ribonuclease D [Translation, ribosomal structure
                     and biogenesis]; COG0349"
                     /db_xref="CDD:440118"
ORIGIN      
        1 msnapvtalp evvvietera laeaveraar apaiavdvea nglfvyrprl ctvqlaweed
       61 grsrvvvvdt lavkaaalap llgprgpikv lhdltfdarm ldeagapiar ardtsvaarm
      121 lghqatglaa vlaaelgvsv dkrfqqhdws rrplgaaelc ylggdvayll aldralaaka
      181 eakdiapeie decahklraa vapprdgrpa yvrikgaqkl aaveravlrr lvqaretaae
      241 aadlppfkvi gnevlielar rrprvhaela qvqgalsgra gryasrwlea ialgvndrdi
      301 ppedqvhfep pridraiaar rrelesrisa frraeaaqrg vdeqailpgh caqdladvll
      361 ssspgdplll eriaaipglg arrferygai laslieprrq aaagegerea
//
LOCUS       WP_235880032             601 aa            linear   BCT 02-MAR-2025
DEFINITION  c-type cytochrome [Polyangium aurulentum].
ACCESSION   WP_235880032
VERSION     WP_235880032.1
KEYWORDS    RefSeq.
SOURCE      Polyangium aurulentum
  ORGANISM  Polyangium aurulentum
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae; Polyangium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012264.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00034.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Polyangium aurulentum"
                     /db_xref="taxon:2567896"
     Protein         1..601
                     /product="c-type cytochrome"
                     /GO_function="GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=62587
     Region          9..192
                     /region_name="YncE"
                     /note="DNA-binding beta-propeller fold protein YncE
                     [General function prediction only]; COG3391"
                     /db_xref="CDD:442618"
     Region          397..601
                     /region_name="MauG"
                     /note="Cytochrome c peroxidase [Posttranslational
                     modification, protein turnover, chaperones]; COG1858"
                     /db_xref="CDD:441463"
ORIGIN      
        1 mrtsdhkrpl allllalvga atvagagcsg tenppipgnd vvvaaktppa isggtlittk
       61 dattavasdp drdrvwivdl vskslksevl leegdepgrv vedangrahv alraggavat
      121 idiasgklid rrdvcnsprg iaydsagdkl hvacaggqlv tlpaaggeat rvlrldrdlr
      181 dvvvqgdklv vtrfrssell vvgldgkvwq rarppasagt fdqfgfeqnf epavawrmvs
      241 kpsggavlvh qravttpvvv tqpggyggtg ggcdggivrt tvtevepgse tipvvlpttp
      301 ggnlphtalp vdvamsatne vtvvaagsnt ifrthrdfln svsdcdppge papgqpvaaa
      361 yagdtklvvq irepaalwip dgnvtialpg esvrdtghdl fhkspsgsgs lscaschpeg
      421 qedgrtwnfd pigprrtqti gggilatapl hwdgdmqdmn eimsevfvnr mggtdpgprh
      481 arliaryvda lpvlpreepv dtaavergka lyeseavgca tchtggmltn nesvdvgtgk
      541 afqvptllgi adrapymhtg captlrdrft npecgggdkh grtsqlsaaq iddlvaylet
      601 l
//
LOCUS       WP_235880052             292 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Polyangium aurulentum].
ACCESSION   WP_235880052
VERSION     WP_235880052.1
KEYWORDS    RefSeq.
SOURCE      Polyangium aurulentum
  ORGANISM  Polyangium aurulentum
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae; Polyangium.
REFERENCE   1  (residues 1 to 292)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Polyangium aurulentum"
                     /db_xref="taxon:2567896"
     Protein         1..292
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=32053
     Region          11..>172
                     /region_name="ArgE"
                     /note="Acetylornithine
                     deacetylase/Succinyl-diaminopimelate desuccinylase or
                     related deacylase [Amino acid transport and metabolism];
                     COG0624"
                     /db_xref="CDD:440389"
     Region          71..281
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mrhgrgrgle adastarqsr wldlvsswvt arptashpag ralvreelvg rlerlgfsvr
       61 vhangdaapv lvaerppetg arwvglfahy dveeagdgws rdpfavsvvd grvfgrgvgd
      121 nlgplsmrll aleevidagn dlassglpgl vwviqgeeei gspwahmlfp kldlpavdlw
      181 leetgyfeed gtqrilarrl parlapllhr vetlaraegr gmrvldryln kafgenrcpc
      241 lthlvreapy laigtndtrt rihapdeslp latfelgwaq fvallhevpr ca
//
LOCUS       WP_235880111             481 aa            linear   BCT 02-MAR-2025
DEFINITION  lamin tail domain-containing protein [Polyangium aurulentum].
ACCESSION   WP_235880111
VERSION     WP_235880111.1
KEYWORDS    RefSeq.
SOURCE      Polyangium aurulentum
  ORGANISM  Polyangium aurulentum
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae; Polyangium.
REFERENCE   1  (residues 1 to 481)
  AUTHORS   Mans,B.J., Anantharaman,V., Aravind,L. and Koonin,E.V.
  TITLE     Comparative genomics, evolution and origins of the nuclear envelope
            and nuclear pore complex
  JOURNAL   Cell Cycle 3 (12), 1612-1637 (2004)
   PUBMED   15611647
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013125.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00932.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Polyangium aurulentum"
                     /db_xref="taxon:2567896"
     Protein         1..481
                     /product="lamin tail domain-containing protein"
                     /calculated_mol_wt=49232
     Region          57..320
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(61,98,189,227,229,277,312..313)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197338"
     Site            order(98,312)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:197338"
     Site            order(189,229,313)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197338"
     Region          324..435
                     /region_name="LTD"
                     /note="Lamin Tail Domain; pfam00932"
                     /db_xref="CDD:460003"
ORIGIN      
        1 mtrtiescfi satcllflla plgcgpeega adedaleeaa levvtvpakg tastfdvgtw
       61 niewfgstgn gptdealqrs nardviagtd ldvwgvqeiv satqwnqlva glpgyaslla
      121 sdvtggstyy tsgeqkvgvl yktsvatvqs aqlictanay dfggrpplev klkvtiggst
      181 fdvyfitlha kalgdtasyd rrvnasialk syldanratd rvivagdfnd dvdtsmisgk
      241 aspyanfvnd sadyrfvtka lsdagvrstl sgtqmidhql mtnelfslyv agsvevyrvd
      301 qyvtsysstt sdhlpvlsri tpgagkaqvi vneicanepg sstsgefvei vnvggaaadl
      361 ggwsiadgtq arhtfpagts laaggalvvf ggssgipagl gnavaastgg lglgnsgdtv
      421 alvnasgatv dtftfgssla stdgvsmnrs pdasaqgtfv lhtaltaasa spgkrangsa
      481 f
//
LOCUS       WP_235879309             513 aa            linear   BCT 02-MAR-2025
DEFINITION  tannase/feruloyl esterase family alpha/beta hydrolase [Burkholderia
            sp. USMB20].
ACCESSION   WP_235879309
VERSION     WP_235879309.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. USMB20
  ORGANISM  Burkholderia sp. USMB20
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (residues 1 to 513)
  AUTHORS   de Vries,R.P., vanKuyk,P.A., Kester,H.C. and Visser,J.
  TITLE     The Aspergillus niger faeB gene encodes a second feruloyl esterase
            involved in pectin and xylan degradation and is specifically
            induced in the presence of aromatic compounds
  JOURNAL   Biochem J 363 (Pt 2), 377-386 (2002)
   PUBMED   11931668
REFERENCE   2  (residues 1 to 513)
  AUTHORS   Hatamoto,O., Watarai,T., Kikuchi,M., Mizusawa,K. and Sekine,H.
  TITLE     Cloning and sequencing of the gene encoding tannase and a
            structural study of the tannase subunit from Aspergillus oryzae
  JOURNAL   Gene 175 (1-2), 215-221 (1996)
   PUBMED   8917102
  REMARK    Erratum:[Gene 1997 Feb 20;186(1):153]
REFERENCE   3  (residues 1 to 513)
  AUTHORS   Kroon,P.A., Faulds,C.B. and Williamson,G.
  TITLE     Purification and characterization of a novel esterase induced by
            growth of Aspergillus niger on sugar-beet pulp
  JOURNAL   Biotechnol Appl Biochem 23 (3), 255-262 (1996)
   PUBMED   8679110
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019157.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07519.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Burkholderia sp. USMB20"
                     /db_xref="taxon:1571773"
     Protein         1..513
                     /product="tannase/feruloyl esterase family alpha/beta
                     hydrolase"
                     /calculated_mol_wt=52574
     Region          64..510
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 maitlaaias mgisgcggsd dapatpvslt aqqacdvvkg ksaggasvtd asmvaatgad
       61 payckvsali spqlemqvql pdnwngklly aggggydgsi qnylwsgpev lkagyaivqs
      121 ngghigtsav dasfasdpfl asmfgsgsvp taaaaakdml hliygkapdq syyegcsngg
      181 reglmaiqrn pdlfdgvivr apaydwpafm gafnrnakav aapgaafttg kisllakair
      241 dkcdaadgiv dgvvsnqsac nfdpsvlrcp sgtdagdscl sdaqiaaant wtstssfang
      301 tytypgwalt gneddpggws qwftgptgng sgslqsllqd atvksyltnd ananslaydw
      361 nsnpaalftm aalnsatnad lspfvshggk lllwhgtadm alshrattay yqklqatmga
      421 savsafaryy qapgvnhcsg gpgadsanlv aaldqwvtkg kapgnlvask lntdgsvaft
      481 rplcqypqyp rytgpandak aamldtnytc tsp
//
LOCUS       WP_235880138             327 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Polyangium aurulentum].
ACCESSION   WP_235880138
VERSION     WP_235880138.1
KEYWORDS    RefSeq.
SOURCE      Polyangium aurulentum
  ORGANISM  Polyangium aurulentum
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae; Polyangium.
REFERENCE   1  (residues 1 to 327)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Polyangium aurulentum"
                     /db_xref="taxon:2567896"
     Protein         1..327
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=35686
     Region          16..302
                     /region_name="YheT"
                     /note="Predicted hydrolase of the alpha/beta-hydrolase
                     fold [General function prediction only]; COG0429"
                     /db_xref="CDD:440198"
ORIGIN      
        1 mndlrasgtl lltvaghfft vapvarhlvr prraplsvpf hlttedralg pialtgrlhh
       61 apaddvlvvv hglggdigsh yvleavraad aagiaclrvn irgsdrtged iyhaaltedl
      121 havlaspela ryrrvhllgy slgghivlra ateeidprvr svaavcppld lhrgsraide
      181 psrlpyrrhv lnaikdvyaa vtrrreaqal plplaealri rtlrewderi vvprfgyegv
      241 ehyyneasva prlgrleips lvvaarhdpm vpahtlapil egakpplevr wiergghvgf
      301 pavvdlgmpg aqsledqlva whlrnvg
//
LOCUS       WP_235880168             382 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome P450 [Polyangium aurulentum].
ACCESSION   WP_235880168
VERSION     WP_235880168.1
KEYWORDS    RefSeq.
SOURCE      Polyangium aurulentum
  ORGANISM  Polyangium aurulentum
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae; Polyangium.
REFERENCE   1  (residues 1 to 382)
  AUTHORS   Werck-Reichhart,D. and Feyereisen,R.
  TITLE     Cytochromes P450: a success story
  JOURNAL   Genome Biol 1 (6), REVIEWS3003 (2000)
   PUBMED   11178272
REFERENCE   2  (residues 1 to 382)
  AUTHORS   Graham-Lorence,S., Amarneh,B., White,R.E., Peterson,J.A. and
            Simpson,E.R.
  TITLE     A three-dimensional model of aromatase cytochrome P450
  JOURNAL   Protein Sci 4 (6), 1065-1080 (1995)
   PUBMED   7549871
REFERENCE   3  (residues 1 to 382)
  AUTHORS   Degtyarenko,K.N. and Archakov,A.I.
  TITLE     Molecular evolution of P450 superfamily and P450-containing
            monooxygenase systems
  JOURNAL   FEBS Lett 332 (1-2), 1-8 (1993)
   PUBMED   8405421
REFERENCE   4  (residues 1 to 382)
  AUTHORS   Nelson,D.R., Kamataki,T., Waxman,D.J., Guengerich,F.P.,
            Estabrook,R.W., Feyereisen,R., Gonzalez,F.J., Coon,M.J.,
            Gunsalus,I.C., Gotoh,O. et al.
  TITLE     The P450 superfamily: update on new sequences, gene mapping,
            accession numbers, early trivial names of enzymes, and nomenclature
  JOURNAL   DNA Cell Biol 12 (1), 1-51 (1993)
   PUBMED   7678494
REFERENCE   5  (residues 1 to 382)
  AUTHORS   Guengerich,F.P.
  TITLE     Reactions and significance of cytochrome P-450 enzymes
  JOURNAL   J Biol Chem 266 (16), 10019-10022 (1991)
   PUBMED   2037557
REFERENCE   6  (residues 1 to 382)
  AUTHORS   Nebert,D.W. and Gonzalez,F.J.
  TITLE     P450 genes: structure, evolution, and regulation
  JOURNAL   Annu Rev Biochem 56, 945-993 (1987)
   PUBMED   3304150
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00067.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Polyangium aurulentum"
                     /db_xref="taxon:2567896"
     Protein         1..382
                     /product="cytochrome P450"
                     /GO_function="GO:0004497 - monooxygenase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=42303
     Region          15..381
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(83,87,94,138,220..221,224..225,228..229,232,265,273,
                     275,298,324..326,330..334,337..338)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(155..156,220,223..224,228,271..274)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
ORIGIN      
        1 mledpharmr slvleappif fspfnggqwf vtrkkiimdi tlnpevysns flagttsggh
       61 ageqekqqeg fkllpialdp pqhtayrapl ngplaaksva aletairtmt nelidkvlaa
      121 grcdffseia eplpvtlfmk lagmptdrla efrhlatqat satvdpatra stfksiagil
      181 tetikvrqek reddlisrll daningrnpt fqemlgysvt lflggletvv nalsfgvrhl
      241 ardqvlqekl radpsllpga ieellrlhgv astprrvmrd vvchgvqlkk ddmvllllpa
      301 anyddaafpn peefvigrte phmtfntgph rcvglnlarl emkvfyqewl krvppfrldp
      361 qapprfmggf nlaittlplv wd
//
LOCUS       WP_235880230             770 aa            linear   BCT 02-MAR-2025
DEFINITION  pseudouridine synthase [Polyangium aurulentum].
ACCESSION   WP_235880230
VERSION     WP_235880230.1
KEYWORDS    RefSeq.
SOURCE      Polyangium aurulentum
  ORGANISM  Polyangium aurulentum
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae; Polyangium.
REFERENCE   1  (residues 1 to 770)
  AUTHORS   Wrzesinski,J., Nurse,K., Bakin,A., Lane,B.G. and Ofengand,J.
  TITLE     A dual-specificity pseudouridine synthase: an Escherichia coli
            synthase purified and cloned on the basis of its specificity for
            psi 746 in 23S RNA is also specific for psi 32 in tRNA(phe)
  JOURNAL   RNA 1 (4), 437-448 (1995)
   PUBMED   7493321
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013045.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00849.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Polyangium aurulentum"
                     /db_xref="taxon:2567896"
     Protein         1..770
                     /product="pseudouridine synthase"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /GO_process="GO:0001522 - pseudouridine synthesis
                     [Evidence IEA]"
                     /GO_process="GO:0009451 - RNA modification [Evidence IEA]"
                     /calculated_mol_wt=82607
     Region          4..423
                     /region_name="TrmA"
                     /note="tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD
                     family [Translation, ribosomal structure and biogenesis];
                     COG2265"
                     /db_xref="CDD:441866"
     Region          432..635
                     /region_name="RluA"
                     /note="Pseudouridine synthase RluA, 23S rRNA- or
                     tRNA-specific [Translation, ribosomal structure and
                     biogenesis]; COG0564"
                     /db_xref="CDD:440330"
ORIGIN      
        1 miecvhaeqc ggcpligmdy aqqltakrar vvsaivhypa lellytrqvv pgdqivgyrg
       61 raklivspsg giglysrsgn hdvvdipscr vlapplaeva stlraliasp ppearalllp
      121 ydpqgggvlr aidlrevhmp pessftgsas alpgttptaq gnrvgvlltf vlqrdrvvsr
      181 delkeagral ramlprvigl aanlheadap qilgpetlvl dgipqaedri gpsyhvasfg
      241 sfvqvhrgqa arvhalitre iasldmqlli detgtnrrqp rvldlyggsg aisialahak
      301 nivtmiesfa pavqnaraaa eaqglgrlda rvgdtaevva smlssnekfd avvmnpprrg
      361 vspaareaia rlgaplciyv scdpdtlard ldhfsrlgya sselipidmi plteevetva
      421 vlkrappvap rviyedddvi vvekgphept enqpeylgsl mqrclrlpgv sslkvvnkld
      481 tgtsglcifa rnevarqlws talatsgrli ylvaakgvtp tkgaiardlr eggrsymart
      541 ryrrlavasg hsilrvipdg hrphqirrhl aaighpvlgd eryghvptnr yfeekhgldr
      601 cfvhliriei vhprtgakll iestlpgdlr asleratgas vikfleqkha lgenrassml
      661 pdappsspap sgrssqpqht pmppdalqpp synpdsisdp msyaspdsfa qppsyaspas
      721 faappsyqpp gapttpptit vpsdpnpits vpdfdesprt hrqaivsddd
//
LOCUS       WP_235880262             756 aa            linear   BCT 02-MAR-2025
DEFINITION  5'-nucleotidase C-terminal domain-containing protein [Polyangium
            aurulentum].
ACCESSION   WP_235880262
VERSION     WP_235880262.1
KEYWORDS    RefSeq.
SOURCE      Polyangium aurulentum
  ORGANISM  Polyangium aurulentum
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae; Polyangium.
REFERENCE   1  (residues 1 to 756)
  AUTHORS   Knofel,T. and Strater,N.
  TITLE     X-ray structure of the Escherichia coli periplasmic 5'-nucleotidase
            containing a dimetal catalytic site
  JOURNAL   Nat Struct Biol 6 (5), 448-453 (1999)
   PUBMED   10331872
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014871.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02872.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Polyangium aurulentum"
                     /db_xref="taxon:2567896"
     Protein         1..756
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /GO_process="GO:0009166 - nucleotide catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=79827
     Region          70..756
                     /region_name="cpdB"
                     /note="bifunctional 2',3'-cyclic-nucleotide
                     2'-phosphodiesterase/3'-nucleotidase; PRK09420"
                     /db_xref="CDD:236506"
ORIGIN      
        1 mrtrlgslla isgvvlamat laacgddtgg tttnntntgg sggtggtggt ggtggtggtg
       61 gtggtgggmt atpegstavl gllettdlht nilsydyfkl vedkaigler tatlinqara
      121 elpnnllvdn gdtiqgtvla dyqaivsplp ceqtlamyka mnhlqydvag ignhefnygl
      181 aflsqvthtp fdvpdldlsg ssacagplfp qvnsnifstk tdknifqpsv lvtktitatg
      241 pdgkaiestl rvgfidftpp qilnwdkrwl egmvftqgvq evappliael rkngadlvva
      301 iihggldnkp yvpnlenqaw hlahvpgida mlmghshqif pnaksttpqf dlpevdkakg
      361 tvagvpavma nfwgqhlgvi klglthdgts wtvdktktiv earpvtttct sglpvacdgm
      421 eqwltgapca fakmcdmqpd ktkifvpadp siaslldaeh qstiayvktp igstdfemts
      481 mfsevgdvga iqivnqaqad yvatyvqdnl pqyatlpils vsapfktgfg ggndftdvma
      541 gplainnaad lylyantlqa vkvtgaeiqd wlewaatrfl qidptkttpq plinpampgy
      601 nfdmftdpri syeidvtqpl pplgmkasgr iknltfegap idmaqefiva tnnyrasggg
      661 nfpgldgskt ifaspdtnre vliayikkvk ditranngsa rsfhftkvvt mgpvtftsaq
      721 nalpkaqaag ltnisllqqd dgsgkalsvy avdlsq
//
LOCUS       WP_235880284             480 aa            linear   BCT 02-MAR-2025
DEFINITION  NFACT RNA binding domain-containing protein [Polyangium
            aurulentum].
ACCESSION   WP_235880284
VERSION     WP_235880284.1
KEYWORDS    RefSeq.
SOURCE      Polyangium aurulentum
  ORGANISM  Polyangium aurulentum
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae; Polyangium.
REFERENCE   1  (residues 1 to 480)
  AUTHORS   Burroughs,A.M. and Aravind,L.
  TITLE     A highly conserved family of domains related to the DNA-glycosylase
            fold helps predict multiple novel pathways for RNA modifications
  JOURNAL   RNA Biol 11 (4), 360-372 (2014)
   PUBMED   24646681
REFERENCE   2  (residues 1 to 480)
  AUTHORS   Courtney,H.S., Li,Y., Dale,J.B. and Hasty,D.L.
  TITLE     Cloning, sequencing, and expression of a
            fibronectin/fibrinogen-binding protein from group A streptococci
  JOURNAL   Infect Immun 62 (9), 3937-3946 (1994)
   PUBMED   8063411
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017482.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05670.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Polyangium aurulentum"
                     /db_xref="taxon:2567896"
     Protein         1..480
                     /product="NFACT RNA binding domain-containing protein"
                     /calculated_mol_wt=50720
     Region          <180..468
                     /region_name="RqcH"
                     /note="Ribosome quality control (RQC) protein RqcH,
                     Rqc2/NEMF/Tae2 family, contains fibronectin-(FbpA) and
                     RNA- (NFACT) binding domains [Translation, ribosomal
                     structure and biogenesis, Posttranslational modification,
                     protein turnover, chaperones]; COG1293"
                     /db_xref="CDD:440904"
ORIGIN      
        1 maddlnksdn sdlhhpllsa lapllgarie aahlcpetgl lalaayagqr iilgaglgph
       61 atglgllprv prsrapsshp lvaamrahlv drrvaslfvs pdgalcllag sedgatarls
      121 lhigrkgrac vvapsgatis wpvgaeadps ptpierftss isstddlanl gaalleasdr
      181 ralesrrafl lrtvkmrlka lerraeavgg dlarlddapr lqkigrllta qasriprgaa
      241 ratlddweeg gsieisldpd kpakaqaetf fakarrlqrg aavmrqrlde tlraaallpp
      301 iadaiasapl epaaldalat raraagvaia dspsassasa kptrrdpqer rpfhtfhgsg
      361 gkpilvgrgg kdndalitkf arphdlwlha knihgahviv plekganppa dllvdaatla
      421 ahfsdarges acevsyverr hvrkprksap gavtfdrekv itvrveparl arllsskeet
//
LOCUS       WP_235880329             653 aa            linear   BCT 02-MAR-2025
DEFINITION  NADH-quinone oxidoreductase subunit H [Polyangium aurulentum].
ACCESSION   WP_235880329
VERSION     WP_235880329.1
KEYWORDS    RefSeq.
SOURCE      Polyangium aurulentum
  ORGANISM  Polyangium aurulentum
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae; Polyangium.
REFERENCE   1  (residues 1 to 653)
  AUTHORS   Weidner,U., Geier,S., Ptock,A., Friedrich,T., Leif,H. and Weiss,H.
  TITLE     The gene locus of the proton-translocating NADH: ubiquinone
            oxidoreductase in Escherichia coli. Organization of the 14 genes
            and relationship between the derived proteins and subunits of
            mitochondrial complex I
  JOURNAL   J Mol Biol 233 (1), 109-122 (1993)
   PUBMED   7690854
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012373.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00146.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Polyangium aurulentum"
                     /db_xref="taxon:2567896"
     Protein         1..653
                     /product="NADH-quinone oxidoreductase subunit H"
                     /EC_number="1.6.5.9"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=68247
     Region          <157..225
                     /region_name="DegQ"
                     /note="Periplasmic serine protease, S1-C subfamily,
                     contain C-terminal PDZ domain [Posttranslational
                     modification, protein turnover, chaperones]; COG0265"
                     /db_xref="CDD:440035"
     Region          261..591
                     /region_name="NuoH"
                     /note="NADH:ubiquinone oxidoreductase subunit 1 (chain H)
                     [Energy production and conversion]; COG1005"
                     /db_xref="CDD:440629"
ORIGIN      
        1 mpgsarsmsl aallsaafvl igcntndnap dllrvvdvap revesgdrle vlgtnlptge
       61 akeatitlrg tlrrpgeapl egqtividka rlsidkvsat vtdglvarmc gqgedamhtt
      121 fhgdvivtla tqapgalpvg gsvkdvtldv rpmtprravv earekegtrv laflgitvap
      181 eapttgglvi gavrpdspaa rvqiqpgdvi tsfegvmvss padvipsgee hlpligikrg
      241 aeepnerpis iegfhssapa dllgaaiimg laaaliflsa splarlvawg erriagrvas
      301 rgvgrrsgtr slamriaaev rgsiaaevgp qdgdpilvrl apylvflgic atfavmpfgk
      361 rlvgadldvg vlfliamtal vtiglvtggp gqerwsffgg lraagrillq qlpaaaalvc
      421 vvamtgslrl ediviaqgga gastldaggw pwhwfvfrnp vffalfllyf tttiaadgla
      481 gaalpeadre egkagskmgt rqllflfaew ahvfvacgia saiflggwqi pglaaaaqad
      541 hvglvllgal vfllkswglv lfvvwirwal prlsaeqrtw lavrwfvpls igasalalag
      601 amaasstgls rnvglvsgvv tfvtlvtlav hgvrrvqitl reartplhln pfl
//
LOCUS       WP_235880354             851 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Polyangium aurulentum].
ACCESSION   WP_235880354
VERSION     WP_235880354.1
KEYWORDS    RefSeq.
SOURCE      Polyangium aurulentum
  ORGANISM  Polyangium aurulentum
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae; Polyangium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Polyangium aurulentum"
                     /db_xref="taxon:2567896"
     Protein         1..851
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=93912
     Region          23..442
                     /region_name="PaaK"
                     /note="Phenylacetate-coenzyme A ligase PaaK,
                     adenylate-forming domain family [Coenzyme transport and
                     metabolism]; COG1541"
                     /db_xref="CDD:441150"
     Region          479..844
                     /region_name="GT4_WbnK-like"
                     /note="Shigella dysenteriae WbnK and similar proteins;
                     cd03807"
                     /db_xref="CDD:340836"
     Site            order(491,679..681,741,763)
                     /site_type="other"
                     /note="putative ADP-binding pocket [chemical binding]"
                     /db_xref="CDD:340836"
ORIGIN      
        1 myaslfrnvl fplyetglrg retlraldel eqsqwrspea vaeasfqsml ealrhaekhv
       61 pfyrkrfaey gvsvdrvqsp edlasfpvlt kddvrkhgae lvadthreak lhlsatsgst
      121 gqpmrfyydh rtyelrvagm mrsnrwagad fgdkelhiws rsfgdvpkke mykravhtav
      181 lrqkyisafd lrldkmddmi reiaeyeprv iisystplym laryalergi qlpqprgiit
      241 saerlfqpqr eaierafgap vfdrygcrev mliasecekh dgmhinaenv yveicrgdkp
      301 apagtpgvvv vtdlrnratp liryrnedva tlkkgacacg rglpllgsle grvldmivgs
      361 dghivagevf phllkdmpie rfqvyqgkdh tvtlkivpgq gfddevaari rqemrvvlgd
      421 ranlamelvr dipltasgkh rvaisevgad lattpvvrpv etkaatvstk ssvrtprarv
      481 ahvvlalrmg gleqvvlrli erldrerfep ivcaleeegd lashlkrldv pihliprspg
      541 ldpsvavrla sflqrervqi vhthnpsphl ygalaaaiar regpdgralp rvvhtkhgrn
      601 ypgaprkvla nrlasalsdk ivavsedahr valelehvda hrlvtirngv dtelfrpddp
      661 vrarralgvp teglhigcva rlskekdhat mleafaavra rrpdahltlv gdgaeraale
      721 aqrdrlglag avtfagqrdd iaailpafdm falssrtegm sltlleaaaa glpivatrvg
      781 gnpevvadge tgllvpagdp arfaeallat aarpdlramg erararvaer ydmgrtaaay
      841 dalyaevlrl s
//
LOCUS       WP_235880550             952 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: BTAD domain-containing putative transcriptional
            regulator [Mycolicibacterium].
ACCESSION   WP_235880550
VERSION     WP_235880550.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium
  ORGANISM  Mycolicibacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae.
REFERENCE   1  (residues 1 to 952)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015649.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03704.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..952
                     /organism="Mycolicibacterium"
                     /db_xref="taxon:1866885"
     Protein         1..952
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /calculated_mol_wt=102641
     Region          7..100
                     /region_name="CadC1"
                     /note="DNA-binding winged helix-turn-helix (wHTH) domain
                     [Transcription]; COG3710"
                     /db_xref="CDD:442924"
     Region          115..952
                     /region_name="COG3903"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443109"
ORIGIN      
        1 matelrllgd vevlvdgrrl dvgharqrcv lvalladvnq pvpaeqlidr vwagdpphrv
       61 rnalagylsr lralfagsde vtitrepggy mlstdpsavd lhrfrrlvad arssaepara
      121 adlfdealsl wrgelcttld tpwvnelrta leverlsivs erndaalnag rhaelladlv
      181 aasrahplde rlagqlmlaq ygsgrqaeal dtyrrtrqrl vdelgvdpsp tlraayqril
      241 dgdsdrapat pavgaqgipq adslprrvts figrrqelah iaaalgqgpl ltltgvggag
      301 ktrlaleaat rhkarfgdgv wwcelaalad daavghavag alrlqqrqgl didatvieyl
      361 atrelllvid ncehlldaaa qlidrivarc pgvtvlatsr ealgvageri mpvpplppde
      421 asalfadrar agrpdfdldr epvgavaeic rqldglplai elaaarirvm gsldlarrld
      481 glrllsggar gasprqqsla atidwsyrll seseqqlfar lsvfaggfdl agahgvcaed
      541 aageedtlal ltglveksiv vlrpgtgwtr yslletlray grnllrenai eqvyarrhav
      601 yftglaeraa agmhtvdega wvdrmlpdyd nlrvafdram adgdvdlamr lvtslsefgh
      661 lrvgyeasew aerafavtgp dhplfaaavg faargawnrg ednrvrslaa laggrspqrg
      721 ngrvaypgdv ladvalyegr pdvalahyta emerarread pirlvwtlfy vaicyaalrt
      781 peaglhaaqe avqvadttan ptarsmagya lglvlkkcep eqalalfdea aqsaasvrnf
      841 wwqgiammea aatravhgds araagefiav lehwdrvgdw sqqwlnlryv trllvrlgat
      901 edaaalhcal vkagkpsplt dtavadlgrp aadglsgvda vkraysalar yr
//
LOCUS       WP_235880307             638 aa            linear   BCT 02-MAR-2025
DEFINITION  HTTM domain-containing protein [Polyangium aurulentum].
ACCESSION   WP_235880307
VERSION     WP_235880307.1
KEYWORDS    RefSeq.
SOURCE      Polyangium aurulentum
  ORGANISM  Polyangium aurulentum
            Bacteria; Pseudomonadati; Myxococcota; Polyangia; Polyangiales;
            Polyangiaceae; Polyangium.
REFERENCE   1  (residues 1 to 638)
  AUTHORS   Schultz,J.
  TITLE     HTTM, a horizontally transferred transmembrane domain
  JOURNAL   Trends Biochem Sci 29 (1), 4-7 (2004)
   PUBMED   14729325
REFERENCE   2  (residues 1 to 638)
  AUTHORS   Li,T., Yang,C.T., Jin,D. and Stafford,D.W.
  TITLE     Identification of a Drosophila vitamin K-dependent gamma-glutamyl
            carboxylase
  JOURNAL   J Biol Chem 275 (24), 18291-18296 (2000)
   PUBMED   10748045
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016946.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05090.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Polyangium aurulentum"
                     /db_xref="taxon:2567896"
     Protein         1..638
                     /product="HTTM domain-containing protein"
                     /GO_function="GO:0008488 - gamma-glutamyl carboxylase
                     activity [Evidence IEA]"
                     /GO_process="GO:0017187 - peptidyl-glutamic acid
                     carboxylation [Evidence IEA]"
                     /calculated_mol_wt=73207
     Region          12..296
                     /region_name="HTTM"
                     /note="Horizontally Transferred TransMembrane Domain;
                     cl02773"
                     /db_xref="CDD:275778"
ORIGIN      
        1 mgawirdhym tldprtlgvf rlvlgflvta dlvrhwkear wfysnegvlt nhyhlfrpss
       61 gfnfsiyhaf sslpevhlvf alaficnvlf wvgwrtrlfs ilsfisvtsl dnrlvmveng
      121 gyvvenllvg wamfmplgqr fsldallrsf rerkekgpad lnervhpawe tkpfvslvgl
      181 itiiniatvy yfnvvnksga iwrrgdtvhy vlhldrmvtg lavffreimp lwmtrvvsws
      241 vlvveamilm lilapygrri trplamflmt clhgsfgimm rlgpfswfmi awsflfpqpv
      301 hweilerfwv rksrawtvvy drrsplaffl crllvrldla erfsfaesae ddahppllaa
      361 rdprggdtls draalreivr slpagrvfwp llqlatlglv gplfdlvsrr rdaaarffgl
      421 tgaprdreap sepspvrara rrwlgfgrea llgwllvcav sqainenksv pqvlkhqqpr
      481 imqatvgypr myqgwgmfap npisddgslt vdaytidgrr idpftgappd ldltdarglg
      541 lnqiwqdyfn rirldrnkaf rqglreylqr whhetgrped elvafdvywv rdqcpppgqd
      601 kpyknetial ltyrkpgykp ppgkpaippe pkvesagn
//
LOCUS       WP_235881100             388 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: FAD-binding oxidoreductase [Mycolicibacterium].
ACCESSION   WP_235881100
VERSION     WP_235881100.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium
  ORGANISM  Mycolicibacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae.
REFERENCE   1  (residues 1 to 388)
  AUTHORS   Lu,G., Campbell,W.H., Schneider,G. and Lindqvist,Y.
  TITLE     Crystal structure of the FAD-containing fragment of corn nitrate
            reductase at 2.5 A resolution: relationship to other flavoprotein
            reductases
  JOURNAL   Structure 2 (9), 809-821 (1994)
   PUBMED   7812715
REFERENCE   2  (residues 1 to 388)
  AUTHORS   Hyde,G.E., Crawford,N.M. and Campbell,W.H.
  TITLE     The sequence of squash NADH:nitrate reductase and its relationship
            to the sequences of other flavoprotein oxidoreductases. A family of
            flavoprotein pyridine nucleotide cytochrome reductases
  JOURNAL   J Biol Chem 266 (35), 23542-23547 (1991)
   PUBMED   1748631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013161.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00970.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Mycolicibacterium"
                     /db_xref="taxon:1866885"
     Protein         1..388
                     /product="FAD-binding oxidoreductase"
                     /calculated_mol_wt=43228
     Region          12..133
                     /region_name="Mb-like_oxidoreductase"
                     /note="Globin domain of uncharacterized oxidoreductases
                     containing a FAD/NADH binding domain; cd19753"
                     /db_xref="CDD:381293"
     Site            order(43..44,51,54..55,58,81,84..85,90,94..95,98)
                     /site_type="other"
                     /note="putative heme binding site [chemical binding]"
                     /db_xref="CDD:381293"
     Region          150..385
                     /region_name="O2ase_reductase_like"
                     /note="The oxygenase reductase FAD/NADH binding domain
                     acts as part of the multi-component bacterial oxygenases
                     which oxidize hydrocarbons using oxygen as the oxidant.
                     Electron transfer is from NADH via FAD (in the oxygenase
                     reductase) and an [2FE-2S]...; cd06187"
                     /db_xref="CDD:99784"
     Site            order(178,191..194,208..210,212,216..218,256,259,384)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99784"
     Site            order(191,193..194)
                     /site_type="other"
                     /note="FAD binding motif [chemical binding]"
                     /db_xref="CDD:99784"
     Site            order(215,218,221,228,236,238)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99784"
     Site            order(251,255..258,260)
                     /site_type="other"
                     /note="beta-alpha-beta structure motif"
                     /db_xref="CDD:99784"
     Site            order(256..257,282..284,359..360)
                     /site_type="other"
                     /note="NAD binding pocket [chemical binding]"
                     /db_xref="CDD:99784"
ORIGIN      
        1 mgledresmr ilrdaldlnl gsealigdfh trwfaadlsa rdlfppdlek qrqvfaqalc
       61 wlcdeliaqr aeepvaflaq lgrdhrkygv tqshyatlqd allttlrkal veqwdrrlae
      121 avddvvqlvv gvmsgaadae tsppfcdgtv lehlrpardi svirlkmdha layhpgqyvp
      181 vqvpqwprrw rylspaipad pqgylefhir svaggmvsta ivgearpgdr wrvsnphgam
      241 eidrdggdvl mvagstglap lrtlimdlar fsqnprvhlf fgakypcely dlrtlweias
      301 tnpwlsvtpv selnfdppwa adypdvtppr glhvrqlgll pevvtrygnw sdrqillsgr
      361 pamvqatkaa litkgapaer iqhdplan
//
LOCUS       WP_235881428             350 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF4185 domain-containing protein
            [Mycolicibacterium].
ACCESSION   WP_235881428
VERSION     WP_235881428.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium
  ORGANISM  Mycolicibacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025182.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13810.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Mycolicibacterium"
                     /db_xref="taxon:1866885"
     Protein         1..350
                     /product="DUF4185 domain-containing protein"
                     /calculated_mol_wt=36874
     Region          29..343
                     /region_name="DUF4185"
                     /note="Domain of unknown function (DUF4185); cl16414"
                     /db_xref="CDD:449800"
ORIGIN      
        1 mpgaanatpa pelppllpgq vlrlgpaagt gtptadygig atdlcefmef psgilqvcgd
       61 sfagqgvgfg gwfspialhv vgeslddpag vrydgvtgvd tplladsape gasqlpagvi
      121 einrenwmmv tttkdlrpqt srlvkavagq gnwetivgse rdagyaggrq sqisgyydpi
      181 ptaesprgwv yivannfdrs gpavlyratp asftdratwq gwtgvawgge pvplwpdrvg
      241 emsvrqidgq tvlsyfnatt gnmeirvaad ptqlgtapvt tvvvaapwpd rvedlppphd
      301 nrlaqpyggy ispgstpdav rvfvsqwntt prggspyrvi qfavnpikpa
//
LOCUS       WP_235881454             305 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: phosphatase PAP2 family protein [Mycolicibacterium].
ACCESSION   WP_235881454
VERSION     WP_235881454.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium
  ORGANISM  Mycolicibacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae.
REFERENCE   1  (residues 1 to 305)
  AUTHORS   Neuwald,A.F.
  TITLE     An unexpected structural relationship between integral membrane
            phosphatases and soluble haloperoxidases
  JOURNAL   Protein Sci 6 (8), 1764-1767 (1997)
   PUBMED   9260289
REFERENCE   2  (residues 1 to 305)
  AUTHORS   Stukey,J. and Carman,G.M.
  TITLE     Identification of a novel phosphatase sequence motif
  JOURNAL   Protein Sci 6 (2), 469-472 (1997)
   PUBMED   9041652
REFERENCE   3  (residues 1 to 305)
  AUTHORS   Messerschmidt,A. and Wever,R.
  TITLE     X-ray structure of a vanadium-containing enzyme: chloroperoxidase
            from the fungus Curvularia inaequalis
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 392-396 (1996)
   PUBMED   8552646
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013718.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01569.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Mycolicibacterium"
                     /db_xref="taxon:1866885"
     Protein         1..305
                     /product="phosphatase PAP2 family protein"
                     /calculated_mol_wt=32720
     Region          <77..191
                     /region_name="PAP2_like"
                     /note="PAP2_like proteins, a super-family of histidine
                     phosphatases and vanadium haloperoxidases, includes type 2
                     phosphatidic acid phosphatase or lipid phosphate
                     phosphatase (LPP), Glucose-6-phosphatase,
                     Phosphatidylglycerophosphatase B and bacterial acid...;
                     cl00474"
                     /db_xref="CDD:469784"
     Site            order(118,124,140..142,180,186,190)
                     /site_type="active"
                     /db_xref="CDD:238813"
ORIGIN      
        1 mqtdphrpda ttsalrsarr rwtltligaa lfliavywla vrtatgqave naalygadqv
       61 dpraflaarn lldtitvtsl vaatvlvgai gllrrqanla maamavilgs qavtqilkyv
      121 vlqrldllpt deylantlps ghttaamsvl fatlivmpyr frgvamffal twavgigayt
      181 viaqwhrlsd tlaadavala vacaaslfla rtdriravvs pgaarftlrt vfvglvtvvg
      241 avsaalgava llaslrqdid aatewqlfls aqwlaaagsi faallfwwtw yrletkrrsd
      301 lttar
//
LOCUS       WP_235881762             258 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DAPG hydrolase family protein [Mycolicibacterium].
ACCESSION   WP_235881762
VERSION     WP_235881762.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium
  ORGANISM  Mycolicibacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae.
REFERENCE   1  (residues 1 to 258)
  AUTHORS   He,Y.X., Huang,L., Xue,Y., Fei,X., Teng,Y.B., Rubin-Pitel,S.B.,
            Zhao,H. and Zhou,C.Z.
  TITLE     Crystal structure and computational analyses provide insights into
            the catalytic mechanism of 2,4-diacetylphloroglucinol hydrolase
            PhlG from Pseudomonas fluorescens
  JOURNAL   J Biol Chem 285 (7), 4603-4611 (2010)
   PUBMED   20018877
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18089.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Mycolicibacterium"
                     /db_xref="taxon:1866885"
     Protein         1..258
                     /product="DAPG hydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=28172
     Region          47..255
                     /region_name="DAPG_hydrolase"
                     /note="DAPG hydrolase PhiG domain; pfam18089"
                     /db_xref="CDD:465645"
ORIGIN      
        1 mmahaylgyr gddgnteygg ffdpqmaalp ahvvdalhhg pqaepvllrl dsaatllddg
       61 yhetengygr langafqvsv rtdmpgvtpq mwdwwfgwhg sdtrryklwh prahasarwa
      121 dgggdghyvg rislieeylg sayakaairf idpaamgldv npgdsvsvca rlgssevpvd
      181 igwfvhqvrs tsagaemrsr fwmggpyvgi rhgnllantv irpvaarqlp dprdllvhca
      241 qemnhlagfl palharfg
//
LOCUS       WP_235881770            1065 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: arabinosyltransferase domain-containing protein
            [Mycolicibacterium].
ACCESSION   WP_235881770
VERSION     WP_235881770.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium
  ORGANISM  Mycolicibacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae.
REFERENCE   1  (residues 1 to 1065)
  AUTHORS   Belanger,A.E., Besra,G.S., Ford,M.E., Mikusova,K., Belisle,J.T.,
            Brennan,P.J. and Inamine,J.M.
  TITLE     The embAB genes of Mycobacterium avium encode an arabinosyl
            transferase involved in cell wall arabinan biosynthesis that is the
            target for the antimycobacterial drug ethambutol
  JOURNAL   Proc Natl Acad Sci U S A 93 (21), 11919-11924 (1996)
   PUBMED   8876238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016484.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04602.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Mycolicibacterium"
                     /db_xref="taxon:1866885"
     Protein         1..1065
                     /product="arabinosyltransferase domain-containing protein"
                     /GO_function="GO:0052636 - arabinosyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0071766 - Actinobacterium-type cell wall
                     biogenesis [Evidence IEA]"
                     /calculated_mol_wt=113591
     Region          13..170
                     /region_name="Arabino_trans_N"
                     /note="Arabinosyltransferase concanavalin like domain;
                     pfam17689"
                     /db_xref="CDD:435976"
     Region          174..635
                     /region_name="Arabinose_trans"
                     /note="Mycobacterial cell wall arabinan synthesis protein;
                     pfam04602"
                     /db_xref="CDD:377388"
     Region          671..1062
                     /region_name="Arabino_trans_C"
                     /note="EmbC C-terminal domain; pfam14896"
                     /db_xref="CDD:434294"
ORIGIN      
        1 mllcglapll pvkqstatia wpqsvnaegf vsditaplvs gaphaldvti pcpavatlpg
       61 ddgvvfstip adgidagrng lfvranadvv yvafrdtvaa vapreavdsg acselriwag
      121 vgavgadfvg ipgaagtlep ekrpqvagvf tdleagpdsg lraridvdtr fittpttvkl
      181 avmvlgvlcv iaaivalavl drasgrrvpr elrrrrtglw twltdaavvg slliwhlvga
      241 lssddgyntt iarvsgeagy itnyyryfga seapfdwyqs vlaqlasist asvwlrlpat
      301 aaaigtwliv srfvlprlgr rvaanrvavl tggavflaaw lpfnnglrpe pliafgvvaa
      361 wilteralat rrlwpyavai vvavfsvtla pqglvalapl lvgargvtri vaarrpvdgl
      421 aaqlaplaaa asllfvvvfr dqtlaavaes vrikyvvgpt ipwyqeflry yfltveesvd
      481 gsltrrfsvl illlclfgvl mvllrrgslp gavngpvwrl agttaiglll ltltptkwav
      541 qfgvfaglag algavtafaf arvglhsrrn lalyvtallf vlawatsgin gwfyvgnygv
      601 pwfdkqpviv gypvttiflv laiacgllag wlhfrmdyag htevadtgrn ralastpllv
      661 vavimvvlel gsmlkatagr ypvyttgaan isalrsglsn ascsmadavl veadtnagml
      721 tpvpgqrfge ygplggedpv gftpngvsdt lepaepvaan pgtvnsdgpv dkpnigvgya
      781 agtgggygpe gvngsrvflp fgldpattpv mgsfdentva akatsawyql pprtpdrplv
      841 svaaagaiwy ynedgsfnyg qslklqwgvh rpdgsyqelg evqpidifvq kawrnlrfpl
      901 ewappeanva rivaddpnls edqwfaftpp rvpvlqtaqd flgrqtpvlm diataanfpc
      961 qrpftehlgi aelpeyrimp nfkqivvssn qwqaaqdggp flfiqallrt esiptylsgd
     1021 wyrdwgsler ylrvvpedea pdavieegst rvfgwsrggp iralp
//
LOCUS       WP_235882041              52 aa            linear   BCT 02-MAR-2025
DEFINITION  RepB family plasmid replication initiator protein [Campylobacter
            coli].
ACCESSION   WP_235882041
VERSION     WP_235882041.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 52)
  AUTHORS   Kilic,T., Popov,A.N., Burk-Korner,A., Koromyslova,A., Zur
            Hausen,H., Bund,T. and Hansman,G.S.
  TITLE     Structural analysis of a replication protein encoded by a plasmid
            isolated from a multiple sclerosis patient
  JOURNAL   Acta Crystallogr D Struct Biol 75 (Pt 5), 498-504 (2019)
   PUBMED   31063152
REFERENCE   2  (residues 1 to 52)
  AUTHORS   Nakamura,A., Wada,C. and Miki,K.
  TITLE     Structural basis for regulation of bifunctional roles in
            replication initiator protein
  JOURNAL   Proc Natl Acad Sci U S A 104 (47), 18484-18489 (2007)
   PUBMED   18000058
REFERENCE   3  (residues 1 to 52)
  AUTHORS   Giraldo,R. and Fernandez-Tresguerres,M.E.
  TITLE     Twenty years of the pPS10 replicon: insights on the molecular
            mechanism for the activation of DNA replication in
            iteron-containing bacterial plasmids
  JOURNAL   Plasmid 52 (2), 69-83 (2004)
   PUBMED   15336485
REFERENCE   4  (residues 1 to 52)
  AUTHORS   del Solar,G., Giraldo,R., Ruiz-Echevarria,M.J., Espinosa,M. and
            Diaz-Orejas,R.
  TITLE     Replication and control of circular bacterial plasmids
  JOURNAL   Microbiol Mol Biol Rev 62 (2), 434-464 (1998)
   PUBMED   9618448
REFERENCE   5  (residues 1 to 52)
  AUTHORS   Moscoso,M., Eritja,R. and Espinosa,M.
  TITLE     Initiation of replication of plasmid pMV158: mechanisms of DNA
            strand-transfer reactions mediated by the initiator RepB protein
  JOURNAL   J Mol Biol 268 (5), 840-856 (1997)
   PUBMED   9180376
REFERENCE   6  (residues 1 to 52)
  AUTHORS   Spiers,A.J., Bhana,N. and Bergquist,P.L.
  TITLE     Regulatory interactions between RepA, an essential replication
            protein, and the DNA repeats of RepFIB from plasmid P307
  JOURNAL   J Bacteriol 175 (13), 4016-4024 (1993)
   PUBMED   8320218
REFERENCE   7  (residues 1 to 52)
  AUTHORS   Abeles,A.L.
  TITLE     P1 plasmid replication. Purification and DNA-binding activity of
            the replication protein RepA
  JOURNAL   J Biol Chem 261 (8), 3548-3555 (1986)
   PUBMED   3949778
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01051.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..52
                     /organism="Campylobacter coli"
                     /db_xref="taxon:195"
     Protein         1..52
                     /product="RepB family plasmid replication initiator
                     protein"
                     /GO_function="GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /calculated_mol_wt=6148
     Region          13..>51
                     /region_name="Rep_3"
                     /note="Initiator Replication protein; pfam01051"
                     /db_xref="CDD:460042"
ORIGIN      
        1 mqtskktnkk riqkavvtqn nrfvyakydm ntnelkmfmw ivaqinsqkp kr
//
LOCUS       WP_235882244             187 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6624 domain-containing protein [Streptomyces apricus].
ACCESSION   WP_235882244
VERSION     WP_235882244.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces apricus
  ORGANISM  Streptomyces apricus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042672.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20329.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Streptomyces apricus"
                     /db_xref="taxon:1828112"
     Protein         1..187
                     /product="DUF6624 domain-containing protein"
                     /calculated_mol_wt=20306
     Region          29..183
                     /region_name="DUF6624"
                     /note="Family of unknown function (DUF6624); pfam20329"
                     /db_xref="CDD:466479"
ORIGIN      
        1 mtgpavparp aphdrdggpv lvpalasala relvrrveed rratvqahrt ptpaarhrve
       61 rcrrdnaeal kaivrrhawp taeligtpas taalmillha pdldfqlacr dliaraaadg
      121 rcpaphhayi adhcavelge pqfygtrvdp atmcpypvrr patlderrrd vglapldvqm
      181 rslrpgg
//
LOCUS       WP_235882294            1156 aa            linear   BCT 02-MAR-2025
DEFINITION  heparinase II/III domain-containing protein [Streptomyces apricus].
ACCESSION   WP_235882294
VERSION     WP_235882294.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces apricus
  ORGANISM  Streptomyces apricus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 1156)
  AUTHORS   Meier,E.L., Razavi,S., Inoue,T. and Goley,E.D.
  TITLE     A novel membrane anchor for FtsZ is linked to cell wall hydrolysis
            in Caulobacter crescentus
  JOURNAL   Mol Microbiol 101 (2), 265-280 (2016)
   PUBMED   27028265
REFERENCE   2  (residues 1 to 1156)
  AUTHORS   Dong,W., Lu,W., McKeehan,W.L., Luo,Y. and Ye,S.
  TITLE     Structural basis of heparan sulfate-specific degradation by
            heparinase III
  JOURNAL   Protein Cell 3 (12), 950-961 (2012)
   PUBMED   23011846
REFERENCE   3  (residues 1 to 1156)
  AUTHORS   Shaya,D., Tocilj,A., Li,Y., Myette,J., Venkataraman,G.,
            Sasisekharan,R. and Cygler,M.
  TITLE     Crystal structure of heparinase II from Pedobacter heparinus and
            its complex with a disaccharide product
  JOURNAL   J Biol Chem 281 (22), 15525-15535 (2006)
   PUBMED   16565082
REFERENCE   4  (residues 1 to 1156)
  AUTHORS   Pojasek,K., Shriver,Z., Hu,Y. and Sasisekharan,R.
  TITLE     Histidine 295 and histidine 510 are crucial for the enzymatic
            degradation of heparan sulfate by heparinase III
  JOURNAL   Biochemistry 39 (14), 4012-4019 (2000)
   PUBMED   10747789
REFERENCE   5  (residues 1 to 1156)
  AUTHORS   Su,H., Blain,F., Musil,R.A., Zimmermann,J.J., Gu,K. and
            Bennett,D.C.
  TITLE     Isolation and expression in Escherichia coli of hepB and hepC,
            genes coding for the glycosaminoglycan-degrading enzymes heparinase
            II and heparinase III, respectively, from Flavobacterium heparinum
  JOURNAL   Appl Environ Microbiol 62 (8), 2723-2734 (1996)
   PUBMED   8702264
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019552.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07940.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1156
                     /organism="Streptomyces apricus"
                     /db_xref="taxon:1828112"
     Protein         1..1156
                     /product="heparinase II/III domain-containing protein"
                     /GO_function="GO:0016829 - lyase activity [Evidence IEA]"
                     /calculated_mol_wt=126428
     Region          105..599
                     /region_name="COG5360"
                     /note="Uncharacterized conserved protein, heparinase
                     superfamily [General function prediction only]"
                     /db_xref="CDD:444135"
     Region          405..624
                     /region_name="Hepar_II_III"
                     /note="Heparinase II/III-like protein; pfam07940"
                     /db_xref="CDD:429747"
     Region          781..950
                     /region_name="Beta_helix"
                     /note="Right handed beta helix region; pfam13229"
                     /db_xref="CDD:463811"
ORIGIN      
        1 mtmtagwylr rlsrmgprei ggragdtvrr rrwrrsappe cpqvdgarft aalpaqaiae
       61 vppdaakrlv aeadrlmdgh aeffgvardd lvdpdwwydp ktgrrapggy afdvpyrdea
      121 tagdvkqiwe psrhqyltvl aaayaltgde ryaervaahl rswwaanppl rgvhwvsgie
      181 lgirllswvw irrlldgwpg apalfeddpl arhqiwhhqr wlaafpsrgs sannhviaea
      241 agqfaaacaf gwfpasprwq adalrslerh lrantfpsgl nrelateyhg lvlelglaav
      301 aeadaagvpv pdsvrlvllr mtdalaavvd drlrpprqgd addghglvvd gagtdrwasl
      361 latgdavfgr lawwpavtgt dvrtpllaal lrpyakegta ppvtrpasrp ahfadagltv
      421 lrgpgrgsap gadpdpgeiw crcdggphgf lsiaahahad alsvevrhdg vdvladpgty
      481 cyhgepkwrq yfrstlghnt lqldgadqsv sggpflwtrq arsrvlavda tqgetatwca
      541 ehdgygdsvh rrrveltaad rtlrvvdevr ggprravrla fhlgpavtad ltgnrarltw
      601 trdgrdrsav ldlpgrlewr appgprrhag vhdrthvrrt glgrkgrrvg irgrkrvlps
      661 valallaagc vgtpggpakp atappstsaa pavarvcahp apgpakapkg avtvdpavvg
      721 dlaaktrknl pgttfwlrpg thrlapdrya qvvpkkgnry lgapgavldg rrtnqyafgg
      781 gardvtirhl tvqnfvaphd egvvnhdsad gwviehatir rnsgaglmag arqqvrascl
      841 rdngqygmna yksagrlrdl vvegneitgn ntgdwerkre gcgctggikf wavdgadvrg
      901 nwvhdnrgag lwadtnnndf riennviean dgaalmyets ynavirknti rrnnwvegrr
      961 yadrgdtfpf atlylsesgg eprvpartdr ieiyrnvled nwsgitlwen adrfcnspan
     1021 tssgdctlla rdtdrcvrpg itraplyadc rwrtqrvdih dnrflldksv vgctvrcdrm
     1081 gvlanygtyp dwspykgekv araitldqhn rwhdnvyvgp wqfvahdpsr vldfgqwqga
     1141 pyqqdagstl dpragg
//
LOCUS       WP_235882320              69 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Streptomyces apricus].
ACCESSION   WP_235882320
VERSION     WP_235882320.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces apricus
  ORGANISM  Streptomyces apricus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 69)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 69)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 69)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 69)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Streptomyces apricus"
                     /db_xref="taxon:1828112"
     Protein         <1..69
                     /product="ATP-binding protein"
     Region          <1..64
                     /region_name="WalK"
                     /note="Sensor histidine kinase WalK [Signal transduction
                     mechanisms]; COG5002"
                     /db_xref="CDD:444026"
ORIGIN      
        1 gvpaaererv ferfvrldea rtrddggagl glaiardvav rhggaltvre aaaggalfel
       61 rlpappggg
//
LOCUS       WP_235882336             190 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase, partial [Streptomyces apricus].
ACCESSION   WP_235882336
VERSION     WP_235882336.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces apricus
  ORGANISM  Streptomyces apricus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 190)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Streptomyces apricus"
                     /db_xref="taxon:1828112"
     Protein         <1..190
                     /product="PfkB family carbohydrate kinase"
     Region          <22..147
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
     Site            order(25,53,105,108..109,112)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238177"
ORIGIN      
        1 lwpdpatagt illalaraad lvfvgedeae aawgitggpq avrealpepr tlvvkngseg
       61 atlfeapapa drhphdpprt ggttthphsd tvthvpalav dvvapvgagd afaagflsat
      121 lrglppeqrl rhghlmaaaa ltvpgdlavp psrdhadrla aldgeawgtl rlgpgwtnta
      181 draeeevtvp
//
LOCUS       WP_235882345             348 aa            linear   BCT 02-MAR-2025
DEFINITION  protein kinase domain-containing protein, partial [Streptomyces
            apricus].
ACCESSION   WP_235882345
VERSION     WP_235882345.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces apricus
  ORGANISM  Streptomyces apricus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 348)
  AUTHORS   Hunter,T. and Plowman,G.D.
  TITLE     The protein kinases of budding yeast: six score and more
  JOURNAL   Trends Biochem Sci 22 (1), 18-22 (1997)
   PUBMED   9020587
REFERENCE   2  (residues 1 to 348)
  AUTHORS   Hanks,S.K. and Hunter,T.
  TITLE     Protein kinases 6. The eukaryotic protein kinase superfamily:
            kinase (catalytic) domain structure and classification
  JOURNAL   FASEB J 9 (8), 576-596 (1995)
   PUBMED   7768349
REFERENCE   3  (residues 1 to 348)
  AUTHORS   Hanks,S.K. and Quinn,A.M.
  TITLE     Protein kinase catalytic domain sequence database: identification
            of conserved features of primary structure and classification of
            family members
  JOURNAL   Methods Enzymol 200, 38-62 (1991)
   PUBMED   1956325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00069.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Streptomyces apricus"
                     /db_xref="taxon:1828112"
     Protein         1..>348
                     /product="protein kinase domain-containing protein"
                     /GO_function="GO:0004672 - protein kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006468 - protein phosphorylation
                     [Evidence IEA]"
     Region          <102..>185
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          <221..>283
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
ORIGIN      
        1 mddyagrvla dryrlplpls dedefresra fdtysgqevv vrqvplpevv eaevldadgl
       61 pdgfvardag lrrpsarttr rpaepavrra ieaaqaaaqi pdhprlaqvf dvfaeggslw
      121 ivsesvpsrq laalldegpl spyraaevas dvltalrvlh ahgwvhrnit artvlvcddg
      181 rvmltglaag aaeealcgyd pvppaegege ggpdgapesh agpegwagpg gpaalghaag
      241 pggpsgqagg tgsgtgpfgh tgagrsggqa vpgargpdgg raaveavrgg glpvtqaqav
      301 rasemaqral daggdvraar agaiaayrag araaarvqee qregrnpa
//
LOCUS       WP_235882487             240 aa            linear   BCT 02-MAR-2025
DEFINITION  TerB family tellurite resistance protein [Streptomyces apricus].
ACCESSION   WP_235882487
VERSION     WP_235882487.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces apricus
  ORGANISM  Streptomyces apricus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 240)
  AUTHORS   Burian,J., Tu,N., Kl'ucar,L., Guller,L., Lloyd-Jones,G.,
            Stuchlik,S., Fejdi,P., Siekel,P. and Turna,J.
  TITLE     In vivo and in vitro cloning and phenotype characterization of
            tellurite resistance determinant conferred by plasmid pTE53 of a
            clinical isolate of Escherichia coli
  JOURNAL   Folia Microbiol (Praha) 43 (6), 589-599 (1998)
   PUBMED   10069007
REFERENCE   2  (residues 1 to 240)
  AUTHORS   Jobling,M.G. and Ritchie,D.A.
  TITLE     The nucleotide sequence of a plasmid determinant for resistance to
            tellurium anions
  JOURNAL   Gene 66 (2), 245-258 (1988)
   PUBMED   3049247
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05099.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Streptomyces apricus"
                     /db_xref="taxon:1828112"
     Protein         1..240
                     /product="TerB family tellurite resistance protein"
                     /calculated_mol_wt=24886
     Region          <176..222
                     /region_name="TerB"
                     /note="Tellurite resistance protein TerB [Inorganic ion
                     transport and metabolism]; COG3793"
                     /db_xref="CDD:443007"
ORIGIN      
        1 mlpvwgrngr fvrigalgvs rilgtrtawt tvgdgeffcp gcggdrnyqr ltgrrrftcl
       61 gvpvvprget gpvvecaacr hhysadvldh ptttrfsaml rdavhtvala vlaaggtcar
      121 tsletaagav raagfddcte eqlaalveal aadtgrlfgd gagepcgpgl sielhealdp
      181 laphlapagr eaillqgari aladgpytpa erealttvgv altictddvt rlltaartps
//
LOCUS       WP_235882529             249 aa            linear   BCT 02-MAR-2025
DEFINITION  bifunctional DNA primase/polymerase [Streptomyces apricus].
ACCESSION   WP_235882529
VERSION     WP_235882529.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces apricus
  ORGANISM  Streptomyces apricus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 249)
  AUTHORS   Lipps,G., Weinzierl,A.O., von Scheven,G., Buchen,C. and Cramer,P.
  TITLE     Structure of a bifunctional DNA primase-polymerase
  JOURNAL   Nat Struct Mol Biol 11 (2), 157-162 (2004)
   PUBMED   14730355
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020811.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09250.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Streptomyces apricus"
                     /db_xref="taxon:1828112"
     Protein         1..249
                     /product="bifunctional DNA primase/polymerase"
                     /calculated_mol_wt=25838
ORIGIN      
        1 msidrnlvsn aphcsgtagd ahtaealpdp fdalgapevt gvtpegaawl asagtyprst
       61 rllwedrpaa pavlacgtvf dvvnapavfg rlmldrlwde gpgsgpvavh rgrillftap
      121 gtaqrlptll aweergaggg sdraralppl lchgtgdavt vpaptpaasa hpahpahpaa
      181 tvhldsrwlv apdtrepwlp gpeavlwaav raarsaarrr lsahspgapi sisppadqda
      241 kvydvsrrr
//
LOCUS       WP_235882629             359 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Streptomyces
            apricus].
ACCESSION   WP_235882629
VERSION     WP_235882629.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces apricus
  ORGANISM  Streptomyces apricus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 359)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Streptomyces apricus"
                     /db_xref="taxon:1828112"
     Protein         1..359
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=38096
     Region          20..296
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(25,27..28,30,49..51,99..101,140..142,172,176,
                     200..203)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(118,142,172,176)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mstsdmstph pddaprepat vlvtgatglv gghsvarllr egyrtrvtvr epgqraavla
       61 alhragvepa drlefavadl gsdggwgral dgvghvlhha spfpvrppet edelvrpare
      121 galrvlaaar eagvprvvmt ssyaaigytl kpddrysetd wtdpdteglp ayhrskvlae
      181 raawdfadaq gdielvvvnp tgifgpqlgd rpsgsvglva smltgrlpvv pvmyfgvvdv
      241 rdvvdlhlra mlrpeaager fiavggpsis ffgmaeilrr nfpaaadllp ateltveqvi
      301 egartdpalr daaalrgrip visnekarsv lgwrprdvte tivatadsll rsglspapa
//
LOCUS       WP_235882623             197 aa            linear   BCT 02-MAR-2025
DEFINITION  PAS domain-containing protein [Streptomyces apricus].
ACCESSION   WP_235882623
VERSION     WP_235882623.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces apricus
  ORGANISM  Streptomyces apricus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 197)
  AUTHORS   Hefti,M.H., Francoijs,K.J., de Vries,S.C., Dixon,R. and Vervoort,J.
  TITLE     The PAS fold. A redefinition of the PAS domain based upon
            structural prediction
  JOURNAL   Eur J Biochem 271 (6), 1198-1208 (2004)
   PUBMED   15009198
REFERENCE   2  (residues 1 to 197)
  AUTHORS   Ponting,C.P. and Aravind,L.
  TITLE     PAS: a multifunctional domain family comes to light
  JOURNAL   Curr Biol 7 (11), R674-R677 (1997)
   PUBMED   9382818
REFERENCE   3  (residues 1 to 197)
  AUTHORS   Zhulin,I.B., Taylor,B.L. and Dixon,R.
  TITLE     PAS domain S-boxes in Archaea, Bacteria and sensors for oxygen and
            redox
  JOURNAL   Trends Biochem Sci 22 (9), 331-333 (1997)
   PUBMED   9301332
REFERENCE   4  (residues 1 to 197)
  AUTHORS   Borgstahl,G.E., Williams,D.R. and Getzoff,E.D.
  TITLE     1.4 A structure of photoactive yellow protein, a cytosolic
            photoreceptor: unusual fold, active site, and chromophore
  JOURNAL   Biochemistry 34 (19), 6278-6287 (1995)
   PUBMED   7756254
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020037.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08448.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Streptomyces apricus"
                     /db_xref="taxon:1828112"
     Protein         1..197
                     /product="PAS domain-containing protein"
                     /calculated_mol_wt=21145
     Region          4..103
                     /region_name="PAS_4"
                     /note="PAS fold; pfam08448"
                     /db_xref="CDD:312075"
     Region          115..170
                     /region_name="HTH_ARSR"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; cl46857"
                     /db_xref="CDD:481197"
ORIGIN      
        1 mspadltvra adpafarrfg ldtdeirgss lldllrstvp arleehfaal ssgrrrrfte
       61 kvtgrdgagl afsaqltgta vrrpsgeiag vvvllhhtgg trrneaepvs aggpvlsald
      121 aqvlegvagg estvqlasrl ylsrqgieyr vgqmlrrfda pnrpalvara halgmfavgq
      181 wpprvlperv rqdmkqk
//
LOCUS       WP_235882632            1043 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein, partial [Streptomyces apricus].
ACCESSION   WP_235882632
VERSION     WP_235882632.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces apricus
  ORGANISM  Streptomyces apricus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019581.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07969.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..1043
                     /organism="Streptomyces apricus"
                     /db_xref="taxon:1828112"
     Protein         <1..1043
                     /product="amidohydrolase family protein"
     Region          <20..98
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
     Region          78..>532
                     /region_name="COG4946"
                     /note="Uncharacterized N-terminal domain of tricorn
                     protease, contains WD40 repeats [Function unknown]"
                     /db_xref="CDD:443973"
     Region          647..995
                     /region_name="HutI"
                     /note="Imidazolonepropionase or related amidohydrolase
                     [Secondary metabolites biosynthesis, transport and
                     catabolism]; COG1228"
                     /db_xref="CDD:440841"
ORIGIN      
        1 gaaapasarp tarppagsvl sftaatngaa tlapggdrlv aevqsvlwsv prdggravpl
       61 tpaglepnrp vhapdgglva fcayrgggfh lwtvrpdgsd lrrrtdgpfd drapawspdg
      121 trlafaserg gdpvtgspyr ihvldlrtgg itrltglpgq egplqdgpwe dfdpawspdg
      181 erilfvrakg vttatgagve artvaavpaa gtgpvvveht gtapaqimtp vpapdgrsla
      241 ylrttapphg tctlvvdgep vavegdvapv pprwtadgel lltvdgrftl vrpreparte
      301 vvpfegvlpv hrpryavkey dlgegrarpv rgihlpalsp dgrhiafaal dslwlagtsg
      361 gaaprrlrra tptqyllgps wardgrtlly addrdgllga yrldpatgee salatggrvh
      421 palspdgtrl acldmtgalv vrdlasgaek vlatplgggg lpgrpswspd grflalcdrn
      481 rlnlrfregh nlvrvvdavt grdrlhavap htsisdryas gpvwspdgrw malvvesalc
      541 llpvtpdgtp rgalrtltge padhpswsgd srtllylsgs rlrligvdgg partvrvpld
      601 rprpepadtv vhagrlwdgt gdsvrddvdv vvrggrvsav ephrrraalt ridasertvv
      661 pglwdahthp wqvtyggrqt vgqltygitt avslggfahe qarireavaa gllagprllt
      721 tgelldgsrv aysmgrahrt rqglrrslar aaaldwdfvk tyvrapgwvm eeaarfaher
      781 lgvrsgshll spgvqlgqdl tthlqatqra efghattpsg rayqdvlevy targvgfglv
      841 atpftsapll gadpgladdp rvtavmppwd aalvrqgagv ppsgdqlaal dteigvyrri
      901 laeggtvalg tdqplvpvgl slhlglralh rgglspaeal rtvtvlparl fgledelgtl
      961 rpgrladltv vdgdpftdfd tlvrtvavlr ggvpyttdgl vaayeplspa vargvadeed
     1021 wlgvgrlmrr egccdaggwh agg
//
LOCUS       WP_235882699             361 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Streptomyces
            apricus].
ACCESSION   WP_235882699
VERSION     WP_235882699.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces apricus
  ORGANISM  Streptomyces apricus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 361)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Streptomyces apricus"
                     /db_xref="taxon:1828112"
     Protein         <1..>361
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..352
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 gadrfaqtls chvpddldpa aledalddlv ahhdalrsrf vpqegaaeaa geadapvawh
       61 iedrsprtrl lrhtgpdtdt phhgafdlrh gpllravlhd rgpgrsrvlh lavhhlvvdg
      121 vswrvlledl drayrarreg rdgraalppk ssplrqwarr lsayaaeggf ddevaywtga
      181 iahapadlpt dgrttgdgtg tyasarsvtv rltpedtsvl lrtlpqtyrt rvndvllsal
      241 grvlcawtgh ervlvdvegh greelfadvd tsrtvgwftt rhpvalavlp daswdavlkq
      301 ikeqlravpr hgvghdvlrh larpgtlpdg araqvsfnyl grfglpdtdg glyaapfrpl
      361 e
//
LOCUS       WP_235882724             211 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Streptomyces
            apricus].
ACCESSION   WP_235882724
VERSION     WP_235882724.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces apricus
  ORGANISM  Streptomyces apricus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 211)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Streptomyces apricus"
                     /db_xref="taxon:1828112"
     Protein         1..>211
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          6..>209
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mqqtphvpas faqqrlwfla qlpggneayn esiaftirgp ldaavlrral dalvvrhqtl
       61 rtrlvavdge vhqhvdppet gfaltaddlt elpdagahld elrlreasap fdlargpltr
      121 grlvalaadh hvllltmhht vfdgrsmnvm mrelsdlypa llhghpsplp plpiqyadha
      181 raqrervlsg elagqdafwq erlagappls g
//
LOCUS       WP_235882745             453 aa            linear   BCT 02-MAR-2025
DEFINITION  CoA transferase, partial [Streptomyces apricus].
ACCESSION   WP_235882745
VERSION     WP_235882745.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces apricus
  ORGANISM  Streptomyces apricus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 453)
  AUTHORS   Heider,J.
  TITLE     A new family of CoA-transferases
  JOURNAL   FEBS Lett 509 (3), 345-349 (2001)
   PUBMED   11749953
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014564.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02515.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Streptomyces apricus"
                     /db_xref="taxon:1828112"
     Protein         1..>453
                     /product="CoA transferase"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
     Region          <56..>182
                     /region_name="CaiB"
                     /note="Crotonobetainyl-CoA:carnitine CoA-transferase CaiB
                     and related acyl-CoA transferases [Lipid transport and
                     metabolism]; COG1804"
                     /db_xref="CDD:441409"
     Region          297..>453
                     /region_name="CaiB"
                     /note="Crotonobetainyl-CoA:carnitine CoA-transferase CaiB
                     and related acyl-CoA transferases [Lipid transport and
                     metabolism]; COG1804"
                     /db_xref="CDD:441409"
ORIGIN      
        1 msapplrgag rtnapalaag vaarllrpvr adtaavscdi gwagpialpl gderavqaac
       61 gimhvhgras grpsplavdy atatagvlaa qgvlaalvar srgtrvsevr tsvgqaalls
      121 lvqylaadtt ddgprepsgr ggatftsadr vrfecetfep lhwrrfwqll gadpragaqg
      181 wrpfqqrfat atcplpaalh laagrapfsa vrsaaararv svvavqgdpr ppdvppftvt
      241 ahhnsgagsg sgsglapvpg pesgaglrep gragaggtsv rplegvrvve sxrrvqgpma
      301 ghilhqlgad vlrieppggd pmrgippiag rcsarfsaln agkttteidl gtrsgrravh
      361 elaatadvfv hnwapgkaaq wqldsgdlha ahpglvyaaa sgwgarppvp lplgtdylvq
      421 ahsglgaalr padeppapsl mtltdllggl vca
//
LOCUS       WP_235882824             269 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF429 domain-containing protein [Peteryoungia rhizophila].
ACCESSION   WP_235882824
VERSION     WP_235882824.1
KEYWORDS    RefSeq.
SOURCE      Peteryoungia rhizophila
  ORGANISM  Peteryoungia rhizophila
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Peteryoungia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016163.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04250.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Peteryoungia rhizophila"
                     /db_xref="taxon:1850373"
     Protein         1..269
                     /product="DUF429 domain-containing protein"
                     /calculated_mol_wt=28943
     Region          3..266
                     /region_name="COG4328"
                     /note="Predicted nuclease (RNAse H fold) [General function
                     prediction only]"
                     /db_xref="CDD:443469"
ORIGIN      
        1 mttsvvgfds awtdnpkapg aicvirldah garlhmeprl asfseaaali haerlevnkc
       61 vvaldqptiv pnlsgsrpvd kvagaliswa gggvqpanrs klgmfddaap iwrfkhaiga
      121 fedpdaarta stglflievf palalvaids aycrrlgapk ynpanrrmfq ldhlhsvaet
      181 irafgtrngl ehlelwcsta aanltptkad qdkidamica lvglhwlvap reqsvmigdl
      241 vngymiapal sgvherlaia arkrnvrir
//
LOCUS       WP_235882833             235 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Peteryoungia
            rhizophila].
ACCESSION   WP_235882833
VERSION     WP_235882833.1
KEYWORDS    RefSeq.
SOURCE      Peteryoungia rhizophila
  ORGANISM  Peteryoungia rhizophila
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Peteryoungia.
REFERENCE   1  (residues 1 to 235)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 235)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Peteryoungia rhizophila"
                     /db_xref="taxon:1850373"
     Protein         1..235
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=23786
     Region          7..233
                     /region_name="PRK12828"
                     /note="short chain dehydrogenase; Provisional"
                     /db_xref="CDD:237220"
ORIGIN      
        1 mrkptcvivt gaagnlgrai ttrlagegvn lvcvdrttda laalvqslps eakvltfaga
       61 dlsdpavaqa maeaavdsfg gidglvntvg gfatgpvdgd tlgqwdlmmn lnarvalvts
      121 iavlpvmqaa rygrivhiaa apglkaganq aayaaskaav lrltesiale hrgnritanc
      181 ilpgtidtpq nraampdakv pdwvlpdsia rliaflispe aavvtgaaip atgle
//
LOCUS       WP_235882836             271 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Peteryoungia
            rhizophila].
ACCESSION   WP_235882836
VERSION     WP_235882836.1
KEYWORDS    RefSeq.
SOURCE      Peteryoungia rhizophila
  ORGANISM  Peteryoungia rhizophila
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Peteryoungia.
REFERENCE   1  (residues 1 to 271)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 271)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 271)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Peteryoungia rhizophila"
                     /db_xref="taxon:1850373"
     Protein         1..271
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=29620
     Region          3..271
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(46,62..63,84,168)
                     /site_type="active"
                     /note="siderophore binding site [active]"
                     /db_xref="CDD:238566"
ORIGIN      
        1 mtmprrsrae afgrriavld wawaetllal diepyavtea slyrervvsp rlpdgvidlg
       61 lrswpnmell kslrpelilt qagygaaass ldpiaptlal plftperrpl klaeaglrti
      121 aerlarepqa daftaafdrg laeirdslrs ydgrpllivk faddrlldiy gpgslfqdvl
      181 drlglasawt eagnhwgfst sgldaiarnp darlviiepg ppetllgsdl wkaipavren
      241 rvvtieptwv fgampsalrf atilgkalqs a
//
LOCUS       WP_235882843             217 aa            linear   BCT 02-MAR-2025
DEFINITION  ribbon-helix-helix domain-containing protein [Peteryoungia
            rhizophila].
ACCESSION   WP_235882843
VERSION     WP_235882843.1
KEYWORDS    RefSeq.
SOURCE      Peteryoungia rhizophila
  ORGANISM  Peteryoungia rhizophila
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Peteryoungia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024858.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13467.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Peteryoungia rhizophila"
                     /db_xref="taxon:1850373"
     Protein         1..217
                     /product="ribbon-helix-helix domain-containing protein"
                     /calculated_mol_wt=23912
     Region          <48..104
                     /region_name="RHH_4"
                     /note="Ribbon-helix-helix domain; cl01775"
                     /db_xref="CDD:470338"
ORIGIN      
        1 mafpdrhlvq teqaelnpaa iqhveesdae pkfraiigrg garrgirles vywdglswll
       61 ngsrqsigdv vdqaaaqvge hsnlasmlrv vafrwmwrrl aqmenvysae nlntliqacp
      121 tpaivltkdk kiqffnepfm tmlkqrlvlg niaqlssgfr fvldtqvdea ilslsgkgkm
      181 vttgftatca gkqltgqmnl amapsqkqmv igyvirg
//
LOCUS       WP_235882879             378 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase [Peteryoungia rhizophila].
ACCESSION   WP_235882879
VERSION     WP_235882879.1
KEYWORDS    RefSeq.
SOURCE      Peteryoungia rhizophila
  ORGANISM  Peteryoungia rhizophila
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Peteryoungia.
REFERENCE   1  (residues 1 to 378)
  AUTHORS   Keller,N.P., Dischinger,H.C. Jr., Bhatnagar,D., Cleveland,T.E. and
            Ullah,A.H.
  TITLE     Purification of a 40-kilodalton methyltransferase active in the
            aflatoxin biosynthetic pathway
  JOURNAL   Appl Environ Microbiol 59 (2), 479-484 (1993)
   PUBMED   8434913
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013087.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00891.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Peteryoungia rhizophila"
                     /db_xref="taxon:1850373"
     Protein         1..378
                     /product="methyltransferase"
                     /GO_function="GO:0008171 - O-methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=41263
     Region          50..>108
                     /region_name="dimerization2"
                     /note="dimerization domain; cl06920"
                     /db_xref="CDD:471544"
     Region          143..357
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(215..221,239..240,265..267,283)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
ORIGIN      
        1 mqhgerdpvn sfavrlrlwr nrqiasprfr alvarlpvlr gianrkanql fhlttgfvht
       61 qilsacvhlg lfealegaar sttaialrcs vtpdhmrhll dqarrldlvv nagpdlwvls
      121 dagavlaser glremirhhd mfyrdianae afwrgevret elrrywayvr ggapatigsa
      181 dvapysalmr esqamladci lashdfgqyr svldigggeg aflcaagnrh pdlklalfdl
      241 pavtelasrh lsqqgildra tlhsgdfvtd ripatddcvs lirilcdhdd erallilsnl
      301 hrhlspgatl ivaeamagds egpnlaalyf gtyfaamgsg rcrtaheiig llaqcgfhha
      361 tastttnpll aglvtarr
//
LOCUS       WP_235882897             305 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Peteryoungia
            rhizophila].
ACCESSION   WP_235882897
VERSION     WP_235882897.1
KEYWORDS    RefSeq.
SOURCE      Peteryoungia rhizophila
  ORGANISM  Peteryoungia rhizophila
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Peteryoungia.
REFERENCE   1  (residues 1 to 305)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Peteryoungia rhizophila"
                     /db_xref="taxon:1850373"
     Protein         1..305
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=33843
     Region          4..298
                     /region_name="PRK11139"
                     /note="DNA-binding transcriptional activator GcvA;
                     Provisional"
                     /db_xref="CDD:182990"
ORIGIN      
        1 mklskqlpln alrvfdavar lqsftragee lgmsqtavsy qiklleghvg ealflrkprr
       61 ielseagerl apkvaegfel lrealadlrn tadgtliiha tatfasqwla rhlghfqlhn
      121 pgiavrlets qdvidfsrtp adlairsgrg nwpglrahfv mrnhftpmls pqladtvggi
      181 rdpldllklr fidpsdpwwr iwftaaghpd vvldslqrtr lgaqsfeaaa avaghgiail
      241 rpefypeeia sgrliqpfel tcedgshywl vypearrnag kirafreflr aslpsfeaip
      301 ptagt
//
LOCUS       WP_235882900             233 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Peteryoungia rhizophila].
ACCESSION   WP_235882900
VERSION     WP_235882900.1
KEYWORDS    RefSeq.
SOURCE      Peteryoungia rhizophila
  ORGANISM  Peteryoungia rhizophila
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Peteryoungia.
REFERENCE   1  (residues 1 to 233)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Peteryoungia rhizophila"
                     /db_xref="taxon:1850373"
     Protein         1..233
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=26237
     Region          8..228
                     /region_name="ompR"
                     /note="osmolarity response regulator; Provisional;
                     PRK09468"
                     /db_xref="CDD:181883"
ORIGIN      
        1 mskkieltdd aphllvvddd trirdllhrf ltekgfrvtv aadaaearrk leglsfdllv
       61 ldvmmpgesg lsltqslsde krvpiillta rseadsriag leagaddyla kpfdprelvl
      121 rinnilkrnm npdapkieqv mfgpytfsvl rkelrkgaev irltdreqdi mylfatragd
      181 tiprhelvgs daevgertid vqinrlrrki eddpanpvwl qtvrgigyrl smd
//
LOCUS       WP_235882969             318 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6456 domain-containing protein [Peteryoungia rhizophila].
ACCESSION   WP_235882969
VERSION     WP_235882969.1
KEYWORDS    RefSeq.
SOURCE      Peteryoungia rhizophila
  ORGANISM  Peteryoungia rhizophila
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Peteryoungia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040428.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20057.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Peteryoungia rhizophila"
                     /db_xref="taxon:1850373"
     Protein         1..318
                     /product="DUF6456 domain-containing protein"
                     /calculated_mol_wt=34652
     Region          161..296
                     /region_name="DUF6456"
                     /note="Domain of unknown function (DUF6456); pfam20057"
                     /db_xref="CDD:437889"
ORIGIN      
        1 mtreknidpp qgirqterah dlasgaslgs pllrtpipst sratapyapp gslsraerkq
       61 irqilrralg gpiklpsdta ghssadkdcq pattvmpape rvarliadgl laptpeglva
      121 tpetaawlrr dlcdlpdelh asqhreivve tlvttegrqv vrrnlqespl fpllrlkekd
      181 grnflsqdav aagerlaadf dfaglqprit aswqprlsar skgapppave ladnrlaart
      241 riaraveamg pelsgvaldv ccfgkgletv ererqwpars aklmlrtall slarhytppp
      301 pkprprhwge edfrpkig
//
LOCUS       WP_235882998             234 aa            linear   BCT 02-MAR-2025
DEFINITION  GAD-like domain-containing protein [Peteryoungia rhizophila].
ACCESSION   WP_235882998
VERSION     WP_235882998.1
KEYWORDS    RefSeq.
SOURCE      Peteryoungia rhizophila
  ORGANISM  Peteryoungia rhizophila
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Peteryoungia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020461.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08887.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Peteryoungia rhizophila"
                     /db_xref="taxon:1850373"
     Protein         1..234
                     /product="GAD-like domain-containing protein"
                     /calculated_mol_wt=27127
     Region          9..221
                     /region_name="COG5620"
                     /note="Uncharacterized conserved protein, DUF1851 domain
                     [Function unknown]"
                     /db_xref="CDD:444351"
ORIGIN      
        1 mdknflerid rigqpqrcea ltseqdmrls rhlpeafmmf lrkygfgdyf grklqycdpd
       61 llspilellf krdpdfgied cfvvaysafg rlvcwserhd hfeidlidqr ltsselaptq
      121 fvlpphlanr prstdpnila rsllpyeskd yeefdssdqp mfercqnlhg klergecygy
      181 fpaiasvgql sparkienik rvqalehfsi laqlgavrlm rlergqysqv rlis
//
LOCUS       WP_235883010             616 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Peteryoungia rhizophila].
ACCESSION   WP_235883010
VERSION     WP_235883010.1
KEYWORDS    RefSeq.
SOURCE      Peteryoungia rhizophila
  ORGANISM  Peteryoungia rhizophila
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Peteryoungia.
REFERENCE   1  (residues 1 to 616)
  AUTHORS   Zhang,Y.L., Arakawa,E. and Leung,K.Y.
  TITLE     Novel Aeromonas hydrophila PPD134/91 genes involved in O-antigen
            and capsule biosynthesis
  JOURNAL   Infect Immun 70 (5), 2326-2335 (2002)
   PUBMED   11953367
  REMARK    Erratum:[Infect Immun 2002 Jun;70(6):3308]
REFERENCE   2  (residues 1 to 616)
  AUTHORS   Swartley,J.S., Liu,L.J., Miller,Y.K., Martin,L.E., Edupuganti,S.
            and Stephens,D.S.
  TITLE     Characterization of the gene cassette required for biosynthesis of
            the (alpha1-->6)-linked N-acetyl-D-mannosamine-1-phosphate capsule
            of serogroup A Neisseria meningitidis
  JOURNAL   J Bacteriol 180 (6), 1533-1539 (1998)
   PUBMED   9515923
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025025.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13641.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Peteryoungia rhizophila"
                     /db_xref="taxon:1850373"
     Protein         1..616
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=68854
     Region          77..311
                     /region_name="CESA_CelA_like"
                     /note="CESA_CelA_like are involved in the elongation of
                     the glucan chain of cellulose; cd06421"
                     /db_xref="CDD:133043"
     Site            167..169
                     /site_type="active"
                     /note="DXD motif [active]"
                     /db_xref="CDD:133043"
     Region          <259..488
                     /region_name="PLN02189"
                     /note="cellulose synthase"
                     /db_xref="CDD:215121"
ORIGIN      
        1 mlflvsgalt lrylfwrste tlapaawswe clfswaffgl eaaaglssls aflilsrtrs
       61 rslevdhnrd wwgeappkva vliatynedr tvlertiiga kssshphcdv ivlddgrrpw
      121 leqfcllqnv ryvqrpdnkg skagninhal sllategdhp dfvavldadf vphtnfvpra
      181 lalfhhpdig lvqtpqhffn pdpiqhnlgl srsypdeqrf ffdhlqpsrd awgiafccgt
      241 ssvvrwqalq kvggfptesv tedfmltlvl qeagyrtvyl nealteglap eglkeyvtqr
      301 arwclglmqi arsrlgplgq nglrlrdrws vadsvifwls tfsfrlaavt fpllywffni
      361 tvvdanvpdi iayftpyyiw vlfslnfvsg glivpvvndv sqllgaipit raaivglvkp
      421 kghpfsvtak ggdrtkvviq wrlmmpflal faatvlglvi gifsdrfafs dagegkavil
      481 fwtiynlfil mvtlavcvel prveqhladn perciilyeg rlkrvwltdl tqgtarirgl
      541 alkpgaplei kfrdlgdmpa hvleargdgs llslelsdvq yelllkrlyv egvvpsitst
      601 klsaivsavf krasrl
//
LOCUS       WP_235883016             127 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2249 domain-containing protein [Peteryoungia rhizophila].
ACCESSION   WP_235883016
VERSION     WP_235883016.1
KEYWORDS    RefSeq.
SOURCE      Peteryoungia rhizophila
  ORGANISM  Peteryoungia rhizophila
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Peteryoungia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021520.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10006.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Peteryoungia rhizophila"
                     /db_xref="taxon:1850373"
     Protein         1..127
                     /product="DUF2249 domain-containing protein"
                     /calculated_mol_wt=14760
     Region          35..114
                     /region_name="COG4309"
                     /note="SirA-like two-layered alpha/beta sandwich domain,
                     DUF2249 family [General function prediction only]"
                     /db_xref="CDD:443450"
ORIGIN      
        1 msqhnearap vlqypvvqpk lhatpqtcie esqrmtvved qtlkldvrei prverhprif
       61 gmlnsllpdy qliltvdhdp vplyyhlemh ydgmfgweyl srgpeiwevr irrkkhegcn
      121 cncgggh
//
LOCUS       WP_235883025             245 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Peteryoungia
            rhizophila].
ACCESSION   WP_235883025
VERSION     WP_235883025.1
KEYWORDS    RefSeq.
SOURCE      Peteryoungia rhizophila
  ORGANISM  Peteryoungia rhizophila
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Peteryoungia.
REFERENCE   1  (residues 1 to 245)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Peteryoungia rhizophila"
                     /db_xref="taxon:1850373"
     Protein         1..245
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=26421
     Region          29..227
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(44..45,47..48,51,55,57..63,158..163,169..170,
                     172..173)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176102"
ORIGIN      
        1 mlvgaedila rltvlkqsmq aetaiisgev rlglpttvvk llgrsiktrt eaaypgiklq
       61 lieamsgylc dwlgkgeldl amlydasfys afpssmvvrp ilqetfrlil ppalsvgppp
      121 ltlsdlrdmh fvfprrlhai ralideflaa advdlkvtad vdslatlvem vreghatilp
      181 gvaiaaeles gvlhardlep apsrqlnlvw teqqsnpnat aavvevvidt vrdmvasgrw
      241 aatal
//
LOCUS       WP_235882893             154 aa            linear   BCT 02-MAR-2025
DEFINITION  paraquat-inducible protein A [Peteryoungia rhizophila].
ACCESSION   WP_235882893
VERSION     WP_235882893.1
KEYWORDS    RefSeq.
SOURCE      Peteryoungia rhizophila
  ORGANISM  Peteryoungia rhizophila
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Peteryoungia.
REFERENCE   1  (residues 1 to 154)
  AUTHORS   Koh,Y.S. and Roe,J.H.
  TITLE     Isolation of a novel paraquat-inducible (pqi) gene regulated by the
            soxRS locus in Escherichia coli
  JOURNAL   J Bacteriol 177 (10), 2673-2678 (1995)
   PUBMED   7751275
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04403.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Peteryoungia rhizophila"
                     /db_xref="taxon:1850373"
     Protein         1..154
                     /product="paraquat-inducible protein A"
                     /calculated_mol_wt=16176
     Region          <9..145
                     /region_name="PqiA"
                     /note="Intermembrane transporter PqiABC subunit PqiA [Cell
                     wall/membrane/envelope biogenesis]; COG2995"
                     /db_xref="CDD:442234"
ORIGIN      
        1 mliwlkafll iaasisfalg itlplmrfes fyvfstdasl ievvaslwdg gdgvlavlva
       61 lvsivfplak illvaaeeia dshlaqshsl arllpvlskw smmdvllvai vifatktsgl
      121 aqaftqpglw fyagsslavv alsaigragg iqkt
//
LOCUS       WP_235883099             259 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Peteryoungia rhizophila].
ACCESSION   WP_235883099
VERSION     WP_235883099.1
KEYWORDS    RefSeq.
SOURCE      Peteryoungia rhizophila
  ORGANISM  Peteryoungia rhizophila
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Peteryoungia.
REFERENCE   1  (residues 1 to 259)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07883.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Peteryoungia rhizophila"
                     /db_xref="taxon:1850373"
     Protein         1..259
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=28447
     Region          1..93
                     /region_name="HTH_MerR-like"
                     /note="Helix-Turn-Helix DNA binding domain of MerR-like
                     transcription regulators; cd00592"
                     /db_xref="CDD:133378"
     Site            order(40,43,48..49,58,75,79,85,89,92..93)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:133378"
     Region          83..155
                     /region_name="HipB"
                     /note="Transcriptional regulator, contains XRE-family HTH
                     domain [Transcription]; COG1396"
                     /db_xref="CDD:441006"
     Region          167..255
                     /region_name="cupin_XRE_C"
                     /note="XRE (Xenobiotic Response Element) family
                     transcriptional regulators, C-terminal cupin domain;
                     cd02209"
                     /db_xref="CDD:380339"
     Site            order(170,183,185,196,199,203,238,240,252)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380339"
ORIGIN      
        1 magvspstlr lwesqdliqp irtptgqrvy drslvdrlkq iawlrsekgl npaairetlr
       61 glpadadedg seneddasdi rpgtrmrrlr reagktlenv aqatgvsvsq lstfertsqg
      121 lsftalheva rhlgttlasl sgqeegqgge slirdgrwas wpttssgvav qvlaegrnlm
      181 ecnrfqlapg assegayqhe geefihmlsg sleiildgdk ffelnagdsf yfesrrphsw
      241 rnissgetvl iwintpatf
//
LOCUS       WP_235883110             402 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease subunit S, partial [Streptococcus
            pneumoniae].
ACCESSION   WP_235883110
VERSION     WP_235883110.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 402)
  AUTHORS   Janscak,P. and Bickle,T.A.
  TITLE     The DNA recognition subunit of the type IB restriction-modification
            enzyme EcoAI tolerates circular permutions of its polypeptide chain
  JOURNAL   J Mol Biol 284 (4), 937-948 (1998)
   PUBMED   9837717
REFERENCE   2  (residues 1 to 402)
  AUTHORS   Bickle,T.A. and Kruger,D.H.
  TITLE     Biology of DNA restriction
  JOURNAL   Microbiol Rev 57 (2), 434-450 (1993)
   PUBMED   8336674
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01420.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..402
                     /product="restriction endonuclease subunit S"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
     Region          6..156
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
     Site            order(75,78..79,81..82,110,112,118,122,125..126,151,
                     153..154)
                     /site_type="other"
                     /note="TRD-CR/TRD-CR interface [polypeptide binding]"
                     /db_xref="CDD:341131"
     Region          238..400
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
ORIGIN      
        1 ssidrkknii nyknlqylsp eqapsrarkl vsqnsvlfst vrpylkniav vrelkeylia
       61 stafivldtl lnetylkyyl lsdnfinrvn nkstgtsypa indynfnlll ialpplseqq
      121 riveaiesal ekvdeyaesy nrleqldkef pdklkksilq yamqgklveq dpndesvevl
      181 lekiraekqk lfeegkikkk dldisivsqg ddnsyygnkd ettsypiyei pkawryikfa
      241 slvnfrigkt pprseatfwg teipwvsisd mpisgyvtnt resisklalk skkidispkg
      301 tllmsfklsi gkvaildipa thneaiisif pyankeniir dylmiflpli stlgdskdai
      361 kgktlnstsi sellipisnh eemkriiskv dllfqkvsql fe
//
LOCUS       WP_235883108             424 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: shufflon system plasmid conjugative transfer pilus
            tip adhesin PilV [Enterobacteriaceae].
ACCESSION   WP_235883108
VERSION     WP_235883108.1
KEYWORDS    RefSeq.
SOURCE      Enterobacteriaceae (enterobacteria)
  ORGANISM  Enterobacteriaceae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales.
REFERENCE   1  (residues 1 to 424)
  AUTHORS   Komano,T.
  TITLE     Shufflons: multiple inversion systems and integrons
  JOURNAL   Annu Rev Genet 33, 171-191 (1999)
   PUBMED   10690407
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016785.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04917.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Enterobacteriaceae"
                     /db_xref="taxon:543"
     gene            1..424
                     /gene="pilV"
     Protein         1..424
                     /product="shufflon system plasmid conjugative transfer
                     pilus tip adhesin PilV"
                     /calculated_mol_wt=44805
     Region          33..345
                     /region_name="Shufflon_N"
                     /note="Bacterial shufflon protein, N-terminal constant
                     region; pfam04917"
                     /db_xref="CDD:309860"
ORIGIN      
        1 mkktdkgvsl levllvigim vmvipkvyen ienhlnnvrw qnaaehanty ntavrnyvad
       61 nastllagsl pktitpatli qkgylksgfs esnfgqsyit giaknsktsr lealtcsngg
      121 qslseagmrs vasmieglgg yinsskqaig agggwsdtps nyglncatgh iamalvgadl
      181 qesdrlyrys itnrpdlnrm htaidmnsnn lnnvgtlngn aaalsgdisa rngtfsgais
      241 gntattngdi tsnngwlvtk nskgwmnsty gggwymsdss wlrsvnnkgi ytggqvkggt
      301 vradgrlytg eylqlektat agascspngl vgrdstgail scqsgvwkkg ggigkvssyq
      361 lnfpysqsnl gqhtfcalsh vratgfhnsn dysecslsks gsnwqltayp psiasyrcda
      421 vcid
//
LOCUS       WP_235883207             247 aa            linear   BCT 02-MAR-2025
DEFINITION  phage antirepressor KilAC domain-containing protein
            [Bifidobacterium moukalabense].
ACCESSION   WP_235883207
VERSION     WP_235883207.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium moukalabense
  ORGANISM  Bifidobacterium moukalabense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 247)
  AUTHORS   Iyer,L.M., Koonin,E.V. and Aravind,L.
  TITLE     Extensive domain shuffling in transcription regulators of DNA
            viruses and implications for the origin of fungal APSES
            transcription factors
  JOURNAL   Genome Biol 3 (3), RESEARCH0012 (2002)
   PUBMED   11897024
REFERENCE   2  (residues 1 to 247)
  AUTHORS   Heinrich,J., Velleman,M. and Schuster,H.
  TITLE     The tripartite immunity system of phages P1 and P7
  JOURNAL   FEMS Microbiol Rev 17 (1-2), 121-126 (1995)
   PUBMED   7669337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015340.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03374.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Bifidobacterium moukalabense"
                     /db_xref="taxon:1333651"
     Protein         1..247
                     /product="phage antirepressor KilAC domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=27761
     Region          1..91
                     /region_name="COG3617"
                     /note="Prophage antirepressor [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:442835"
     Region          49..235
                     /region_name="KilAC"
                     /note="Phage antirepressor protein YoqD, KilAC domain
                     [Mobilome: prophages, transposons]; COG3645"
                     /db_xref="CDD:442862"
ORIGIN      
        1 mtendepwfi akdvcdilei snpsdalqsl dddektnlgn syvwsepgrr pliisepgly
       61 rlvmrsrkpe akefqrwvth evlpqirrtg gyiptsesds dedimaravl vaqrtierkn
      121 qqlqvkdeqi kvlepkarfa davaasdgtc lvgelakmlr qngmdigqnr lfrllqadgy
      181 lgksgsnrnv ptqramdlgl frikettvth adghttvsrt pkvtgkgqry fidrywgrtq
      241 ptleaga
//
LOCUS       WP_235883227             503 aa            linear   BCT 02-MAR-2025
DEFINITION  GntR family transcriptional regulator [Bifidobacterium
            moukalabense].
ACCESSION   WP_235883227
VERSION     WP_235883227.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium moukalabense
  ORGANISM  Bifidobacterium moukalabense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 503)
  AUTHORS   Hillerich,B. and Westpheling,J.
  TITLE     A new GntR family transcriptional regulator in streptomyces
            coelicolor is required for morphogenesis and antibiotic production
            and controls transcription of an ABC transporter in response to
            carbon source
  JOURNAL   J Bacteriol 188 (21), 7477-7487 (2006)
   PUBMED   16936034
REFERENCE   2  (residues 1 to 503)
  AUTHORS   Rigali,S., Nothaft,H., Noens,E.E., Schlicht,M., Colson,S.,
            Muller,M., Joris,B., Koerten,H.K., Hopwood,D.A., Titgemeyer,F. and
            van Wezel,G.P.
  TITLE     The sugar phosphotransferase system of Streptomyces coelicolor is
            regulated by the GntR-family regulator DasR and links
            N-acetylglucosamine metabolism to the control of development
  JOURNAL   Mol Microbiol 61 (5), 1237-1251 (2006)
   PUBMED   16925557
REFERENCE   3  (residues 1 to 503)
  AUTHORS   Gorelik,M., Lunin,V.V., Skarina,T. and Savchenko,A.
  TITLE     Structural characterization of GntR/HutC family signaling domain
  JOURNAL   Protein Sci 15 (6), 1506-1511 (2006)
   PUBMED   16672238
REFERENCE   4  (residues 1 to 503)
  AUTHORS   Rigali,S., Schlicht,M., Hoskisson,P., Nothaft,H., Merzbacher,M.,
            Joris,B. and Titgemeyer,F.
  TITLE     Extending the classification of bacterial transcription factors
            beyond the helix-turn-helix motif as an alternative approach to
            discover new cis/trans relationships
  JOURNAL   Nucleic Acids Res 32 (11), 3418-3426 (2004)
   PUBMED   15247334
  REMARK    Publication Status: Online-Only
REFERENCE   5  (residues 1 to 503)
  AUTHORS   Lee,M.H., Scherer,M., Rigali,S. and Golden,J.W.
  TITLE     PlmA, a new member of the GntR family, has plasmid maintenance
            functions in Anabaena sp. strain PCC 7120
  JOURNAL   J Bacteriol 185 (15), 4315-4325 (2003)
   PUBMED   12867439
REFERENCE   6  (residues 1 to 503)
  AUTHORS   Rigali,S., Derouaux,A., Giannotta,F. and Dusart,J.
  TITLE     Subdivision of the helix-turn-helix GntR family of bacterial
            regulators in the FadR, HutC, MocR, and YtrA subfamilies
  JOURNAL   J Biol Chem 277 (15), 12507-12515 (2002)
   PUBMED   11756427
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012610.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00392.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Bifidobacterium moukalabense"
                     /db_xref="taxon:1333651"
     Protein         1..503
                     /product="GntR family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=56794
     Region          12..214
                     /region_name="FadR"
                     /note="DNA-binding transcriptional regulator, FadR family
                     [Transcription]; COG2186"
                     /db_xref="CDD:441789"
     Region          287..425
                     /region_name="PDC1_MCP_like"
                     /note="first PDC (PhoQ/DcuS/CitA) domain of
                     methyl-accepting chemotaxis proteins and similar domains;
                     cd12913"
                     /db_xref="CDD:350338"
ORIGIN      
        1 mntplgrmsi fqpldettka eliterltqa iesgmlknge klpgesemah mfavspittr
       61 ealeqlrsed lvetrrgrdg gsfitsspsr niqrlesnll tmptmeikdh ralyialvss
      121 sarlateeas arernailea iqslvndlet agtenddylt hghhemqlhi eiavattsph
      181 lvnslidlqd klkhllwlrf adkeqidfla kqykyaahll stnqdqlfer ritdiikvgf
      241 swlverklal qqqhventls pttpievshq ihdlfnvyak mlhdwemeit rqtahsiink
      301 qefdslserl thpaleqdrr iigaglipsp dflpdapwhs cwwtsrwnqt nqatirplri
      361 sdnpqsasfy nftvqdwwtg pkntdglhit gpyidyicsn eftltlsrpf yvdrhfagva
      421 gldlsaatle hevceqllrl drpaalishe qrvlastnts llcgdlvadl nnthakatid
      481 cgalapsnat tskkqeslim lmf
//
LOCUS       WP_235883253             188 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6474 family protein [Saccharopolyspora elongata].
ACCESSION   WP_235883253
VERSION     WP_235883253.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040114.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20079.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..188
                     /product="DUF6474 family protein"
                     /calculated_mol_wt=20196
     Region          <37..183
                     /region_name="DUF6474"
                     /note="Family of unknown function (DUF6474); pfam20079"
                     /db_xref="CDD:466283"
ORIGIN      
        1 mrkrttgrgv rktgtrgsrk avkaakkadk kaakaiekge hgritpgnak kiigvakvvg
       61 pviapfaiha vavareryer mrahrlgvpv dqlgsftgrg aalhariagd gealrelreq
      121 sasgeeaava eqyaertatr laqltsavra aermpaqrrk sahravdael grieddllsr
      181 fgvarprr
//
LOCUS       WP_235883258             148 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: HD domain-containing protein [Saccharopolyspora].
ACCESSION   WP_235883258
VERSION     WP_235883258.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora
  ORGANISM  Saccharopolyspora
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae.
REFERENCE   1  (residues 1 to 148)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13328.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Saccharopolyspora"
                     /db_xref="taxon:1835"
     Protein         1..148
                     /product="HD domain-containing protein"
                     /calculated_mol_wt=15555
     Region          14..>88
                     /region_name="SpoT"
                     /note="(p)ppGpp synthase/hydrolase, HD superfamily [Signal
                     transduction mechanisms, Transcription]; COG0317"
                     /db_xref="CDD:440086"
ORIGIN      
        1 migpvlglde vasiaarahl gqvdkagrpy vehlaavasg vrerggsdaq vaaawlhdav
       61 eddalseewl laaalppetk aivlavtkrp dedpadyaar ilgtpgallv keadlahnad
      121 parlavldav trerlerkya rmrallgl
//
LOCUS       WP_235883319             181 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Saccharopolyspora elongata].
ACCESSION   WP_235883319
VERSION     WP_235883319.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..181
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=18313
     Region          <1..147
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mdrstglnav mvgmvvalpa iplfailadr igrrpvyiga siatigwafa ffalldtrnp
       61 aavivavvgg llifsaysav igaffselfp tevrysgvsl acnlasvlag slapiiaial
      121 hsafgtgyai aaylavmgai slgasliate trsvdlaeig aaepaqgepa arslnlaeei
      181 s
//
LOCUS       WP_235883311             193 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF5655 domain-containing protein
            [Saccharopolyspora].
ACCESSION   WP_235883311
VERSION     WP_235883311.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora
  ORGANISM  Saccharopolyspora
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039496.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18899.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Saccharopolyspora"
                     /db_xref="taxon:1835"
     Protein         1..193
                     /product="DUF5655 domain-containing protein"
                     /calculated_mol_wt=21071
     Region          85..190
                     /region_name="DUF5655"
                     /note="Domain of unknown function (DUF5655); pfam18899"
                     /db_xref="CDD:465903"
ORIGIN      
        1 maqrdgmnlv gwqsmmdhaa glleqrtgag laewkervaa sgttseprlr awlgeqgvgg
       61 ysqdllvyet ygypefmrtd paelideqfa drqalrpvfd elleavvdlg vvtiqarkty
      121 vslvspkrtf aivkpstksr ldiglhlpgr qpagrllpak slpkgnvria ltaesgvdde
      181 vvallrecye ans
//
LOCUS       WP_235882966              97 aa            linear   BCT 02-MAR-2025
DEFINITION  type II toxin-antitoxin system PrlF family antitoxin [Peteryoungia
            rhizophila].
ACCESSION   WP_235882966
VERSION     WP_235882966.1
KEYWORDS    RefSeq.
SOURCE      Peteryoungia rhizophila
  ORGANISM  Peteryoungia rhizophila
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Peteryoungia.
REFERENCE   1  (residues 1 to 97)
  AUTHORS   Schmidt,O., Schuenemann,V.J., Hand,N.J., Silhavy,T.J., Martin,J.,
            Lupas,A.N. and Djuranovic,S.
  TITLE     prlF and yhaV encode a new toxin-antitoxin system in Escherichia
            coli
  JOURNAL   J Mol Biol 372 (4), 894-905 (2007)
   PUBMED   17706670
REFERENCE   2  (residues 1 to 97)
  AUTHORS   Kiino,D.R., Phillips,G.J. and Silhavy,T.J.
  TITLE     Increased expression of the bifunctional protein PrlF suppresses
            overproduction lethality associated with exported
            beta-galactosidase hybrid proteins in Escherichia coli
  JOURNAL   J Bacteriol 172 (1), 185-192 (1990)
   PUBMED   2152898
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027267.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15937.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Peteryoungia rhizophila"
                     /db_xref="taxon:1850373"
     Protein         1..97
                     /product="type II toxin-antitoxin system PrlF family
                     antitoxin"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0097351 - toxin sequestering activity
                     [Evidence IEA]"
                     /GO_process="GO:0001558 - regulation of cell growth
                     [Evidence IEA]"
                     /calculated_mol_wt=10716
     Region          1..97
                     /region_name="MazE_antitoxin"
                     /note="Antidote-toxin recognition MazE, bacterial
                     antitoxin; cl00877"
                     /db_xref="CDD:469969"
ORIGIN      
        1 mtdryqttvp sgvrkrlrlg kgdqiryrtd atgrvyieav sdepdpaiga fldllerdmm
       61 snpqrlrald gdlverlqal vgdvdvdldv plsadde
//
LOCUS       WP_235883346             460 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-binding protein [Saccharopolyspora elongata].
ACCESSION   WP_235883346
VERSION     WP_235883346.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 460)
  AUTHORS   Anantharaman,V., Koonin,E.V. and Aravind,L.
  TITLE     Regulatory potential, phyletic distribution and evolution of
            ancient, intracellular small-molecule-binding domains
  JOURNAL   J Mol Biol 307 (5), 1271-1292 (2001)
   PUBMED   11292341
REFERENCE   2  (residues 1 to 460)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     A novel family of predicted phosphoesterases includes Drosophila
            prune protein and bacterial RecJ exonuclease
  JOURNAL   Trends Biochem Sci 23 (1), 17-19 (1998)
   PUBMED   9478130
REFERENCE   3  (residues 1 to 460)
  AUTHORS   Schlosser,A., Hamann,A., Bossemeyer,D., Schneider,E. and
            Bakker,E.P.
  TITLE     NAD+ binding to the Escherichia coli K(+)-uptake protein TrkA and
            sequence similarity between TrkA and domains of a family of
            dehydrogenases suggest a role for NAD+ in bacterial transport
  JOURNAL   Mol Microbiol 9 (3), 533-543 (1993)
   PUBMED   8412700
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014325.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02254.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..460
                     /product="NAD-binding protein"
                     /GO_process="GO:0006813 - potassium ion transport
                     [Evidence IEA]"
                     /calculated_mol_wt=49724
     Region          195..>430
                     /region_name="TrkA"
                     /note="Trk/Ktr K+ transport system regulatory component
                     TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and
                     metabolism, Signal transduction mechanisms]; COG0569"
                     /db_xref="CDD:440335"
ORIGIN      
        1 mvnhagpppe hevapptgrt llvigddedl grsvadhaqr wgnhvdrlhr pdddelrhrl
       61 pdsvdgvavv srndivalry allvehlapg vrlvvtifdr tvadeltrtv pnctvlgmtd
      121 aivpallgtc vtpnlaslqr sgdqllaver tadgtrvrrt phrpapwrsr fhmlrsqfrp
      181 vetssramlt gfaglllvla ldstlawtfl hehwadafwh atrtlttvgs spasehapdw
      241 ykllsaasml avlafaamft agfvdrlmsr rltgivgsra vprrnhvvvv glgqvalrlc
      301 celqamgipv vaverdrhap clplarelgi pvvlgrggdr fllqrlalpk aralaavssd
      361 gleniavavt aravapqlri vlraggddvt aeskslfrig avcdvtriag pfvaarllgl
      421 kplsvftlld rtcalfdddl vvdlaqwasr pienvaisan
//
LOCUS       WP_235883347             229 aa            linear   BCT 02-MAR-2025
DEFINITION  integrase core domain-containing protein [Saccharopolyspora
            elongata].
ACCESSION   WP_235883347
VERSION     WP_235883347.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025063.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13683.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..229
                     /product="integrase core domain-containing protein"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=26039
     Region          <8..193
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 mlvlgmkvaa stvwellkea gidpaperas ntwadflrsr adallacdfl etvtlsgarr
       61 yvlavightt rririlgata hptaswatqa arnlvmdled ascrarytir drdgkfpalf
      121 dailkdagie vvltgirvpr mnsimerwvq tcrrelldrt liwnqrhllh alreferfyn
      181 ehrphqgian arplcplpqp itdpeqinrl dirrhdrlgg ilheyrhaa
//
LOCUS       WP_235883408             136 aa            linear   BCT 02-MAR-2025
DEFINITION  amino acid permease [Saccharopolyspora elongata].
ACCESSION   WP_235883408
VERSION     WP_235883408.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..136
                     /product="amino acid permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=14536
     Region          8..>99
                     /region_name="PotE"
                     /note="Serine transporter YbeC, amino acid:H+ symporter
                     family [Amino acid transport and metabolism]; COG0531"
                     /db_xref="CDD:440297"
ORIGIN      
        1 marlrelgye pelrrgldvl gnvmmgfati spvvglyavv lvgatiagpr wvwalpvcla
       61 gqclllalya elssefpisg gayqwtrrll gpsyawltgc ighirlgrpg talnfgavtc
      121 nrptwtgrcp ttrttg
//
LOCUS       WP_235883419             479 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent monooxygenase [Saccharopolyspora elongata].
ACCESSION   WP_235883419
VERSION     WP_235883419.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 479)
  AUTHORS   Schreuder,H.A., van der Laan,J.M., Swarte,M.B., Kalk,K.H., Hol,W.G.
            and Drenth,J.
  TITLE     Crystal structure of the reduced form of p-hydroxybenzoate
            hydroxylase refined at 2.3 A resolution
  JOURNAL   Proteins 14 (2), 178-190 (1992)
   PUBMED   1409567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01494.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..479
                     /product="FAD-dependent monooxygenase"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /calculated_mol_wt=50606
     Region          2..477
                     /region_name="PRK06126"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:235704"
ORIGIN      
        1 mlivggglvg lttalvlrhh gvdvtlvekr attspqpkar rfhvrsleif relglaetvh
       61 eaargladhd cmavgrtlae aeqlppwrps gpgesldvsp elpclvaqnv lepvlrraaq
      121 dagadirfst alasfeqdtd gvvaefagsr lhaahlvaad garspvrsal gigrsgrgai
      181 gednvnvyfr adladvvrgr efnicqiqhp eapggllsvd grldwvfmtp ggevdrdwpa
      241 lvrtalgvpa pdlevmsvlp wrpemlvadr yssgrvhlag daahvmppya avgantgiad
      301 ahnlgwklaa vlsgaaapsl ldsydaerrp agwfaadqss rrstdltaap dptlahpfvl
      361 vaggfqysag aisggpaegg eaepvtefap agrvgtriph rwldtartrs tvdlagpgwa
      421 lavaddpqrw qpagipvhrl dvdflrageg vlirpddvva wrgtdptapa nvlekllra
//
LOCUS       WP_235883462             171 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Saccharopolyspora elongata].
ACCESSION   WP_235883462
VERSION     WP_235883462.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024913.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13523.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..171
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /calculated_mol_wt=18621
     Region          9..153
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
ORIGIN      
        1 mrfdplsrqd fgllqswlsa phvrewwrga eptadlveqe ygpsvdgvdp arcfvinvag
       61 ervgmvqcyr madepewdal vgipaaagvd yligmpgrcg lgigpsaiaa ftelvfglyd
      121 dvesivavpq adnqasrral eragfelvee rdlesddpsd agvsaiyefr r
//
LOCUS       WP_235883483             137 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome P450 [Saccharopolyspora elongata].
ACCESSION   WP_235883483
VERSION     WP_235883483.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 137)
  AUTHORS   Werck-Reichhart,D. and Feyereisen,R.
  TITLE     Cytochromes P450: a success story
  JOURNAL   Genome Biol 1 (6), REVIEWS3003 (2000)
   PUBMED   11178272
REFERENCE   2  (residues 1 to 137)
  AUTHORS   Graham-Lorence,S., Amarneh,B., White,R.E., Peterson,J.A. and
            Simpson,E.R.
  TITLE     A three-dimensional model of aromatase cytochrome P450
  JOURNAL   Protein Sci 4 (6), 1065-1080 (1995)
   PUBMED   7549871
REFERENCE   3  (residues 1 to 137)
  AUTHORS   Degtyarenko,K.N. and Archakov,A.I.
  TITLE     Molecular evolution of P450 superfamily and P450-containing
            monooxygenase systems
  JOURNAL   FEBS Lett 332 (1-2), 1-8 (1993)
   PUBMED   8405421
REFERENCE   4  (residues 1 to 137)
  AUTHORS   Nelson,D.R., Kamataki,T., Waxman,D.J., Guengerich,F.P.,
            Estabrook,R.W., Feyereisen,R., Gonzalez,F.J., Coon,M.J.,
            Gunsalus,I.C., Gotoh,O. et al.
  TITLE     The P450 superfamily: update on new sequences, gene mapping,
            accession numbers, early trivial names of enzymes, and nomenclature
  JOURNAL   DNA Cell Biol 12 (1), 1-51 (1993)
   PUBMED   7678494
REFERENCE   5  (residues 1 to 137)
  AUTHORS   Guengerich,F.P.
  TITLE     Reactions and significance of cytochrome P-450 enzymes
  JOURNAL   J Biol Chem 266 (16), 10019-10022 (1991)
   PUBMED   2037557
REFERENCE   6  (residues 1 to 137)
  AUTHORS   Nebert,D.W. and Gonzalez,F.J.
  TITLE     P450 genes: structure, evolution, and regulation
  JOURNAL   Annu Rev Biochem 56, 945-993 (1987)
   PUBMED   3304150
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00067.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..137
                     /product="cytochrome P450"
                     /GO_function="GO:0004497 - monooxygenase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=14802
     Region          <21..137
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
ORIGIN      
        1 mpaedlpdlp tsppplrtae rggpglprya redveiggvt irageavlld ttlanfdgsa
       61 feepdrfdvt rapnphlafa hgpwhclgap larielrtvf asllprfpsl rlavpveelr
      121 lsadsftskl velpvtw
//
LOCUS       WP_235883492             108 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding enzyme [Saccharopolyspora elongata].
ACCESSION   WP_235883492
VERSION     WP_235883492.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024591.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13193.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..108
                     /product="AMP-binding enzyme"
                     /calculated_mol_wt=11651
     Region          <2..107
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
ORIGIN      
        1 mdrkkdmivs ggfnvfprev edaltghdav svaavygvad dkwgeavtat vvlrpghevt
       61 pdelirhvks vkgsvqapkq irvvdelprt pvgkidkkal raqwgprs
//
LOCUS       WP_235883579             490 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: AMP-binding protein [Saccharopolyspora].
ACCESSION   WP_235883579
VERSION     WP_235883579.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora
  ORGANISM  Saccharopolyspora
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae.
REFERENCE   1  (residues 1 to 490)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Saccharopolyspora"
                     /db_xref="taxon:1835"
     Protein         1..490
                     /product="AMP-binding protein"
                     /calculated_mol_wt=52752
     Region          20..486
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(151,154..159,161..162)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(154,270..271,292..297,374,386,389,400,478)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(154,194..195,241,243..244,247,270..271,292..297,374,
                     386,389,397..400,459)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(194,243..244,247,270,397..399,453,459)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
ORIGIN      
        1 mpaadrpaag tpfpvrlael aaaepdraal tcedttltra elesesnrla rdllargvrq
       61 gdfvsivlpn gvpfvlaeia awkvgavpqp lspklpagel aeiialtepa lvigdvepal
      121 tggrpvlpar frsaqqddgp lpvavspawk aptsggstgr pkvivagrpa lvedvepsad
      181 sfgiepggva lvpspvshna pnmsvamgll rgnhvilmrr fdaaetlrli gehkvtwlyv
      241 vstilarisk lpaevrdaad msslravfht aapvpvwlkr qwidwvgpil relyagteaq
      301 aatfitseew lahpgsvgrv lrgemevrda egrvlppgre gkvwmrtaae vdptyrllgg
      361 raqvdgegwe slgdigwfde dgylylgdre tdmilvggan vypaeleaal alhdavvdsc
      421 viglpdddlg nvphaivhpr rpvteeslle hlrtrvapyr lprsfefvad plrdeagkir
      481 rsrlraerlp
//
LOCUS       WP_235883622             330 aa            linear   BCT 02-MAR-2025
DEFINITION  DMT family transporter [Saccharopolyspora elongata].
ACCESSION   WP_235883622
VERSION     WP_235883622.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 330)
  AUTHORS   Jack,D.L., Yang,N.M. and Saier,M.H. Jr.
  TITLE     The drug/metabolite transporter superfamily
  JOURNAL   Eur J Biochem 268 (13), 3620-3639 (2001)
   PUBMED   11432728
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10007109
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..330
                     /product="DMT family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=33442
     Region          20..153
                     /region_name="ydcZ"
                     /note="Uncharacterized membrane protein YdcZ, DUF606
                     family [Function unknown]; COG3238"
                     /db_xref="CDD:442470"
     Region          179..319
                     /region_name="ydcZ"
                     /note="Uncharacterized membrane protein YdcZ, DUF606
                     family [Function unknown]; COG3238"
                     /db_xref="CDD:442470"
ORIGIN      
        1 mtvsalrhqe drpktrertl gmvgaagvgv llaiqaring algvrmddgi aaglisffgg
       61 fvvllaatfa fpqarrgwrn lrtelrrpgg lrpwqclggv cggylvftqg maaaalgvam
      121 ftvavvagqv ssglvvdrlg lgpagpqhvt parllgagla vvavviavsa klgsgeaswl
      181 vllpalagig lgwqaavngr mkqaadsavf aamfnfgigm talavafave valrglphfp
      241 aepwlytggf lgifviggsv alvrftgvlv lslgmiagql vgallldvfa paagtgipas
      301 tvlgvlltlv avgvaalpdr pgragrrlpr
//
LOCUS       WP_235883644             263 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase [Saccharopolyspora elongata].
ACCESSION   WP_235883644
VERSION     WP_235883644.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 263)
  AUTHORS   Urbach,C., Evrard,C., Pudzaitis,V., Fastrez,J., Soumillion,P. and
            Declercq,J.P.
  TITLE     Structure of PBP-A from Thermosynechococcus elongatus, a
            penicillin-binding protein closely related to class A
            beta-lactamases
  JOURNAL   J Mol Biol 386 (1), 109-120 (2009)
   PUBMED   19100272
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024748.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13354.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..263
                     /product="serine hydrolase"
                     /GO_function="GO:0008800 - beta-lactamase activity
                     [Evidence IEA]"
                     /GO_process="GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=27682
     Region          3..262
                     /region_name="PenP"
                     /note="Beta-lactamase class A [Defense mechanisms];
                     COG2367"
                     /db_xref="CDD:441934"
ORIGIN      
        1 mgfaerlrae aafgglpgri gfaawdlder epvlvdaerv vhaastikvl imitalravh
       61 egrlgldaev elpaeraggf gvlrelpsvt aislrdlitl mivisdnaat navidavgfe
      121 airacaadlg ctatrvqrrl mdvnapgrne ttaldqarvl aalaegsalp peltehaldv
      181 lsrqqvrdrl pallpdgaqc wnktgellgl rhdvgligda rpravvavlv deltdersaa
      241 gyrggpacda iaslgrsvhr alg
//
LOCUS       WP_235883788              64 aa            linear   BCT 02-MAR-2025
DEFINITION  SIP domain-containing protein [Saccharopolyspora elongata].
ACCESSION   WP_235883788
VERSION     WP_235883788.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 64)
  AUTHORS   Butterton,J.R. and Calderwood,S.B.
  TITLE     Identification, cloning, and sequencing of a gene required for
            ferric vibriobactin utilization by Vibrio cholerae
  JOURNAL   J Bacteriol 176 (18), 5631-5638 (1994)
   PUBMED   8083157
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016818.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04954.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..64
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..64
                     /product="SIP domain-containing protein"
                     /calculated_mol_wt=6826
     Region          <27..62
                     /region_name="ViuB"
                     /note="NADPH-dependent ferric siderophore reductase,
                     contains FAD-binding and SIP domains [Inorganic ion
                     transport and metabolism]; COG2375"
                     /db_xref="CDD:441942"
ORIGIN      
        1 mrdnpgntpg raalaaaeal papaestygw vvgeselaaa lrrhwvrsgl pksnimfcgy
       61 wrmp
//
LOCUS       WP_235883782             265 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding enzyme [Saccharopolyspora elongata].
ACCESSION   WP_235883782
VERSION     WP_235883782.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024591.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13193.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..265
                     /product="AMP-binding enzyme"
                     /calculated_mol_wt=28874
     Region          <22..258
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(28..29,49..54,145,157,160,171,250)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
ORIGIN      
        1 msfleraaav fadrpavvdg tqlrvfagga ppwpallerm telgidirhl ygltetfgpa
       61 vvcewqpewd glagderarl varqgianvi aeplrvvdae grdvpadglt tgeillrgnd
      121 vmlgyyrdea ataaatldgw frsgdlgvrh pdgyvelrdr irdviisgge nitsievena
      181 ltahpdvlea avvgapdpkw devpiayvtl rdaatadead lidfvraria rfkapkrivf
      241 gdlpktstgk lqknvlrera rtrrp
//
LOCUS       WP_235883673             276 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Saccharopolyspora
            elongata].
ACCESSION   WP_235883673
VERSION     WP_235883673.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 276)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 276)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..276
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=29036
     Region          9..276
                     /region_name="PRK08263"
                     /note="short chain dehydrogenase; Provisional"
                     /db_xref="CDD:181334"
ORIGIN      
        1 mqhastgprt wfitgasrgl grafteaala agdqvvgvar ditplealva asggclvafp
       61 ldvsdrgavf agveraiaaf grldvvvnna ggvvlgmlee vteelarahl dtnffgalwv
      121 sqavlphlra qgsgrilqvs smgsaggfaa tgmygagkaa ldsmsealqm everfgikvt
      181 ilqpggyqtd lftrgltqtt eheayaplre wlaglwaese dfdpakaaev vlqvvameep
      241 pkrlilgsaa ydmvdgmtka mtaelakweh lsrqae
//
LOCUS       WP_235883766             121 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Saccharopolyspora
            elongata].
ACCESSION   WP_235883766
VERSION     WP_235883766.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024934.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13545.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..121
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=13086
     Region          <2..110
                     /region_name="Crp"
                     /note="cAMP-binding domain of CRP or a regulatory subunit
                     of cAMP-dependent protein kinases [Signal transduction
                     mechanisms]; COG0664"
                     /db_xref="CDD:440428"
ORIGIN      
        1 merhrladtv yqlavdrmqe ierlradlvs ltpaariarv vlhlameigr pgndgilvel
       61 giprdelavm aamsrsvavp llsqlqgagi lglgrgritv rdlgrlriaa tgrvepdypv
      121 m
//
LOCUS       WP_235883891             471 aa            linear   BCT 02-MAR-2025
DEFINITION  prolyl oligopeptidase family serine peptidase [Saccharopolyspora
            elongata].
ACCESSION   WP_235883891
VERSION     WP_235883891.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012546.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00326.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..471
                     /product="prolyl oligopeptidase family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=50787
     Region          <46..466
                     /region_name="PreP"
                     /note="Prolyl endopeptidase PreP, S9A serine peptidase
                     family [Amino acid transport and metabolism]; COG1505"
                     /db_xref="CDD:441114"
ORIGIN      
        1 mpwlpgddyr avvasadgrh vvavqgmldp vpvavaalad paapawrefv tdaslnlagf
       61 lvgdewiavt dagaprgrvv avdlnsatpn epgswrtivp eseatirsvr pvgdvlylae
      121 lvdthagvri vdhdgaprgt valpgkgalg emplammnil rppaedqavf afstltsswg
      181 vyrhrpgepr letlrepavr ledcvvedgw atsedgtrvp yhlvrrrdvq ldrprpvllw
      241 gyggfgapwv pqfpgtmaaf vasggvfghv hlrgggelgr dwwedgrlrn kqngyadlya
      301 iaedliatgv tspdllaltg asgggllcgv aatqrpdlwr vvaprvpild ligacrdgyg
      361 rfvvdtefar vddpdeirrl agfspyhlvr dgvdypavfi eagdtdprcp pwharkfaar
      421 lqaatgngsp vfvhvwrdsg hgwatdkgrl ltqatewlaf mektlgmtpp e
//
LOCUS       WP_235883978             188 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3558 family protein [Saccharopolyspora elongata].
ACCESSION   WP_235883978
VERSION     WP_235883978.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023502.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12079.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..188
                     /product="DUF3558 family protein"
                     /calculated_mol_wt=19410
     Region          15..184
                     /region_name="DUF3558"
                     /note="Protein of unknown function (DUF3558); pfam12079"
                     /db_xref="CDD:432314"
ORIGIN      
        1 mrrwgwlsav allgvvagct sgeqaslasa pptpttsaee satesaspsi trkvppeqqk
       61 rladlpadql cglvereels alafpverge freigfdppv rgctfqassg grsvligaqp
      121 egfatlgree vqlgsvrgtr tmrasdctvf agvagatlqv svtageasta qcekaelvae
      181 yvltavvv
//
LOCUS       WP_235883931             815 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator
            [Saccharopolyspora elongata].
ACCESSION   WP_235883931
VERSION     WP_235883931.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..815
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=84837
     Region          39..>138
                     /region_name="LpxK"
                     /note="Tetraacyldisaccharide-1-P 4'-kinase; cl23778"
                     /db_xref="CDD:474051"
     Region          <249..770
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          631..812
                     /region_name="CsgD"
                     /note="DNA-binding transcriptional regulator, CsgD family
                     [Transcription]; COG2771"
                     /db_xref="CDD:442052"
     Region          753..805
                     /region_name="HTH_LUXR"
                     /note="helix_turn_helix, Lux Regulon; smart00421"
                     /db_xref="CDD:197715"
ORIGIN      
        1 mnhsttsrpa llpdghaagl rsviaadpaa slvagvqgag gygktalleq lartyhdagi
       61 pvfganaldr agdgavlvdd ahrldeavlg ellevarrpg arlvvayrpg prpaalaeli
      121 gelgapvlla algrdeiaaq agavapewvg wlqaqtggvp ryvsrvlaaa epgaaelpar
      181 aldqfqhdld qlgeagrecv mamaigatph pdllaalldl dpaevgsall svraaglvga
      241 ddvllpivra aalrlapwer rlrvtrrlve tqlarggsvl plvspllgad iallpeatla
      301 aafekagdea lrdaphlarp lfaaavsaga pvvsvaarqa raaavagdld ealrladqvi
      361 vddavpdkel gvqvaasila hrgllersae lcrwsvgklr wpgdrafaal gligsgrlge
      421 adellsssdd agpptsitga aaqlaagvre svvgsaatal stlvrsasls epvgrgilvp
      481 dspaaiaalv alhcgeldva qstldraiga saggpllhhr hrllaawlpl vrgdtvtarv
      541 klqaaagpaa rdrllataie agiasrdndm galaaargqa rqavaehsvd lfallplgel
      601 vvaaarlrdq dwiapylaea rsllerlgnp plwtsmltwk rlqaaivled lddarhlaad
      661 ldgmahhnpl aaamaeaarv wlriltgqvd qdeveqasrg lhsaglawdg arlagqaaih
      721 tkdrramlal lecaralqgk pprpravrgg dtdvlserek evaelvlagl tykqvgkrlf
      781 isaktvehhi srikqrlgca nredllnrlr ellgq
//
LOCUS       WP_235883995             440 aa            linear   BCT 02-MAR-2025
DEFINITION  right-handed parallel beta-helix repeat-containing protein
            [Saccharopolyspora elongata].
ACCESSION   WP_235883995
VERSION     WP_235883995.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024627.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13229.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..440
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /calculated_mol_wt=44507
     Region          45..329
                     /region_name="beta_helix_1"
                     /note="parallel beta-helix repeat-containing protein;
                     TIGR03805"
                     /db_xref="CDD:163517"
ORIGIN      
        1 mtvavlgtlt lvlagcgagd dgsgqgrrpt gahvtirvpa daptisaavs laqpgdlvlv
       61 aqgvyqesvk iataritlrg esrdkviidg rlqqpngivv aapgvavenl tvenntqngv
      121 lvtgsakava glpgtsggyd tgdepvtflk sflvshvtat rnglygiyaf saqdgviers
      181 yasgsadsgi yvgqckpcni vvrdniaeln avgyegtnas gdmyvvgnrf agnrvgltin
      241 sdhqekllpq qgsvvagnlv agnqqtptpe qadggwgigi gidggsgnqf srnriadnin
      301 aglvitatad lppdgnqive ntfaangidv gwtfptatqg rgnclhandl rttvpaqlat
      361 iascpvpaqs ptpsdtwamp kapggipftd vavpdaqpqf pnatttgata vpavpvlpdt
      421 asiplpsasl lagsalvqts
//
LOCUS       WP_235884019             797 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Saccharopolyspora elongata].
ACCESSION   WP_235884019
VERSION     WP_235884019.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 797)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..797
                     /product="AMP-binding protein"
                     /calculated_mol_wt=85316
     Region          1..530
                     /region_name="FAAL"
                     /note="Fatty acyl-AMP ligase (FAAL); cd05931"
                     /db_xref="CDD:341254"
     Site            order(142,145..150,152..153)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341254"
     Site            order(169,189..191,265,268..271,296..300,305,347,405,416,
                     419)
                     /site_type="active"
                     /db_xref="CDD:341254"
     Region          609..795
                     /region_name="PlsC"
                     /note="1-acyl-sn-glycerol-3-phosphate acyltransferase
                     [Lipid transport and metabolism]; COG0204"
                     /db_xref="CDD:439974"
ORIGIN      
        1 mrilhdeaqe vvsyrdlqrs aarvaaglla rdlrlgdava lmlptgrdyf agftgvllag
       61 gvpvpiyppt rpsqladhlr rqvgilnnar arllvtdpga arlgrlvqgq vasmrhvltp
      121 aeltdcgevg avgrdatdva llqytsgstg npkgvvltha nllsnirama qvahvstadv
      181 fiswlplyhd mgligawlss lyfglplvvm ppstflarpa rwlqaihthr gtlsagpnfa
      241 yelclrkiga peiegldlss wrvafngaep vhadtltrfa erfrpygfdp raltpvygla
      301 escvgltfpp mgrgpvvdrv ireefvrsgr alraaagdpd plrfvscgvp lpgheirvad
      361 tagnalgdrr egriefrgss vttgyfrnpr atqalvrrgw ldtgdlgyld agelyvtgra
      421 kdliiragrn lhpeeleaav gdlpgirkgc vavfastgrr tgdteqlvvl aetrqidtaa
      481 laalhdrigt itidllgaap ddvvlappga ipktssgkir raasresyer gmtgeryrpl
      541 wlragfaata agsylrwigr lvggmvfdaw cwcllvgvgv ptvlaaallp srapavarra
      601 arslalltgt rlivanaeql srtpacvvvv nhpsyldgia lmaalpgqyt fvagevlatk
      661 pvlgfllrrv gtvfvqradr eqgvadtrrl tvaaragrrl vlfpegglsp lpglrpfhmg
      721 afviaagagr pvvpvaihgt rsilqpgshr fvhcgvvhvt vgepihpagv dwdaaveleh
      781 rarnvisehc gepdrvr
//
LOCUS       WP_235884052             256 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase [Saccharopolyspora elongata].
ACCESSION   WP_235884052
VERSION     WP_235884052.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 256)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 256)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..256
                     /product="phosphotransferase"
                     /calculated_mol_wt=28566
     Region          2..206
                     /region_name="APH"
                     /note="Phosphotransferase enzyme family; pfam01636"
                     /db_xref="CDD:426359"
     Region          107..222
                     /region_name="CotS"
                     /note="Thiamine kinase or a related kinase [Coenzyme
                     transport and metabolism]; COG0510"
                     /db_xref="CDD:440276"
ORIGIN      
        1 mttrrfikty rdaraadtar ehyrwltgln agieypemig gtdttlgfah vtgraaeldd
       61 lpavaavlgr lhyaarragi dqaqvnsryi tpggrwlapf agprrkrlhh qrdqtpdspl
      121 dhqdidawld haalfpaaiy kdsnprnfli tpdrgpvlvd fdsltlapvg ydlakllvtt
      181 gmtygrlprs aaddavaayt helgepcsht eiavwaefhd lltrrylgrh gyrhpwsavr
      241 pwpahdvtst ptkrsr
//
LOCUS       WP_235884102             860 aa            linear   BCT 02-MAR-2025
DEFINITION  PEP/pyruvate-binding domain-containing protein [Saccharopolyspora
            elongata].
ACCESSION   WP_235884102
VERSION     WP_235884102.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 860)
  AUTHORS   Lim,K., Read,R.J., Chen,C.C., Tempczyk,A., Wei,M., Ye,D., Wu,C.,
            Dunaway-Mariano,D. and Herzberg,O.
  TITLE     Swiveling domain mechanism in pyruvate phosphate dikinase
  JOURNAL   Biochemistry 46 (51), 14845-14853 (2007)
   PUBMED   18052212
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01326.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..860
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..860
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0016310 - phosphorylation [Evidence IEA]"
                     /calculated_mol_wt=91866
     Region          17..846
                     /region_name="PRK06241"
                     /note="phosphoenolpyruvate synthase; Validated"
                     /db_xref="CDD:235751"
ORIGIN      
        1 msvvvpldaa dadlalvggk gaslarlaga glpvppgfdv ttvayrdfaa taglqerilt
       61 avaevdpdrp etaqaaseki qqwfaespvp aeiaeavgaa yagmgedvpv avrssataed
      121 lpemsfagqq dtylnirgea avldavrrcw aslwtaraid yrlrngvaad evalavvvqd
      181 lvpaeaagvl ftrdpvtgag edvlvnaawg lgesivggqv tpdtyvvard grvreqivgd
      241 kavmtvrtae gtreepvpeg rrgvpvlspa eagelaalgv rieelygrpm dvewaardgr
      301 fwvvqarpit glrdrpvetw ndslggdylw tcanlgeaip svmtpctwsl veifmsetma
      361 lsrvgphrls gniggrfyln lsltfavgna lglgslvraa seqafgripa dvavpalpms
      421 rwrvvrsala salpfrrrva ayqrrlpell asspdrcarl heriaaagda gelralwrsd
      481 vepllrdssr mlaagarldg aglvrirprl lklvgeadan alltglsagg dalaslgpvm
      541 glgelargei drdtfarswg hrcpdefevs aprpaedpew idrqlaglrs aadpaellar
      601 qqrtrdaawe rlrsrhpgke rrlrrriaga araargreaa rselirafwv lrafvlrage
      661 ltgcgddlff lrieevlavl ggsreplgav adrrqtyray aalgpyptlv rehfdpvrws
      721 alpdrrmdvf desvalapvs hsvrgfagaa gvvegtarvl tsvdegdslr pgevlvttvt
      781 nvgwtplfpr aaavvtdvga plshaaivar elgipavvgc gnattrlrsg drvrvdgaag
      841 tvevlsadsg veehrdenwr
//
LOCUS       WP_235884179             222 aa            linear   BCT 02-MAR-2025
DEFINITION  integrase core domain-containing protein [Saccharopolyspora
            elongata].
ACCESSION   WP_235884179
VERSION     WP_235884179.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025063.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13683.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..222
                     /product="integrase core domain-containing protein"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=25537
     Region          <2..186
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 maastvweil keagiepape rnsstwtefl rsqadallac dffetitlsr trlyvlavie
       61 httrririlg atahptaswa tqaarnlvmd legascrary mirdrdgkfp alfdailkdt
      121 gievvltgir vprmnsimer wvqtcrrell drtliwnqrh llhalrefer fyhehrphqg
      181 ianarplcpl pqpitapeqm thldirrrdr lggilheyrh aa
//
LOCUS       WP_235884188             435 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Saccharopolyspora elongata].
ACCESSION   WP_235884188
VERSION     WP_235884188.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..435
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45005
     Region          25..423
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(38..39,42..43,46,78,128..129,131..133,136,156,
                     159..160,163,243,246..247,250..252,255,283,287,344..345,
                     349,353,370,373..374,377..378,381)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340877"
ORIGIN      
        1 msanrvheat pgtaappeyr pvmawaitgm lvlfivvnwa dktvfgiaaq plkeelglts
       61 sqigfigsaf fflfsitgll vgfignrvrt kwvllalaal wsltmvpvlv sasavtllis
      121 riglgaaegp agamanagaf ewfpkekrsf psawlssgas iakiaiapvl alivavwgwr
      181 aaflslalig vvwcaawali gregpfsphr sqaavaedpa mqqrvpfrki alsgtfvggv
      241 igtftmygmv sviltwlpsy fevglgidrl qagamfglps isgmiamlgv swisdrrvsa
      301 gsssrvqrgi vpavslligg gllallpylg spvlaisavv lgygigavsl planaalsqi
      361 cpprqqagal gvflalqtss gliapaltgv lvdmaaspge gfalafqvfg favmvggiat
      421 mllvnpdrda arilg
//
LOCUS       WP_235884205             425 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase [Saccharopolyspora elongata].
ACCESSION   WP_235884205
VERSION     WP_235884205.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..425
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=43256
     Region          50..355
                     /region_name="T7SS_mycosin"
                     /note="type VII secretion-associated serine protease
                     mycosin; TIGR03921"
                     /db_xref="CDD:274856"
ORIGIN      
        1 myakrslrtl laaavgslgi llidpsaaqa qqcvgagqat spvpwaqqvl tperlwplts
       61 gskqrvavvg tgvssplldg kiaasvdlsp psrtgasgkp dclglgtava gvigaketse
      121 hgfhgvapkt klltakvvgd sfpqgtqpnd svapdplaag inwsvdqgat iitvaavsyq
      181 dspalrqatk raldadvvvi aaagraeqnd ppgiapypas yegvlsvgmi gedgmvaadt
      241 haprvdlvap gaevtaaypd ggvgpatgte laagyvagtv allrdyrpql sneevvqrll
      301 ataspapegv gsrnyghgli npyqaavanl vdghpttlap adpgvptaee larqaawqqs
      361 dslayglvav gvsaavvmta vvvfgprgrr rrwrsgiaea pvdrpedelp eppadlfddr
      421 pktgv
//
LOCUS       WP_235884249             344 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein, partial [Saccharopolyspora
            elongata].
ACCESSION   WP_235884249
VERSION     WP_235884249.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         <1..344
                     /product="phosphopantetheine-binding protein"
     Region          <1..232
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
     Region          <269..338
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
ORIGIN      
        1 ppalplvadp rdvrpelmgt rqttvdaetw aafrkqctah gvtpsaamft ayaivlarqa
       61 ghrrmllnsl qlnrlplhpd vhrivgafas tmlipvepae ggtfaelaad nqrrfsesaa
      121 hnlisgvevs relgrrrgth rpvapivfqs tlgmdaamge rvpdtagplg ridmadhhqq
      181 lrtpqvalev rmfelrdemy lvfslvdelf dtaavdamfr eltgiartla epgswndpva
      241 lpaaadapes eelrvgryar qdrteeggap rtevertiae vweemlaisg vdraadffal
      301 ggdsllavrv lgklarekgi avavrdflea ptisglaala sper
//
LOCUS       WP_235884257              74 aa            linear   BCT 02-MAR-2025
DEFINITION  4Fe-4S dicluster domain-containing protein [Saccharopolyspora
            elongata].
ACCESSION   WP_235884257
VERSION     WP_235884257.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024644.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13247.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..74
                     /product="4Fe-4S dicluster domain-containing protein"
                     /calculated_mol_wt=8136
     Region          <5..42
                     /region_name="DMSOR_beta-like"
                     /note="Beta subunit of the DMSO Reductase (DMSOR) family;
                     cl25360"
                     /db_xref="CDD:355383"
ORIGIN      
        1 mdddtrtaak cnfcahrvde glepacvvvc pthsiwvgdl ddcracatpr raaghrqtrr
       61 stvvrgpaaw rhhr
//
LOCUS       WP_235884289             276 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase N-terminal domain-containing protein
            [Saccharopolyspora elongata].
ACCESSION   WP_235884289
VERSION     WP_235884289.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025039.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13655.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..276
                     /product="reverse transcriptase N-terminal
                     domain-containing protein"
                     /calculated_mol_wt=30015
     Region          30..109
                     /region_name="RVT_N"
                     /note="N-terminal domain of reverse transcriptase;
                     pfam13655"
                     /db_xref="CDD:433382"
     Region          72..>254
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            order(203..208,252)
                     /site_type="other"
                     /note="putative NTP binding site [chemical binding]"
                     /db_xref="CDD:238828"
     Site            253
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238828"
ORIGIN      
        1 mtttlepmdk ldivpgqggm ngpedelvdw sqvdwdaaes nvkrlrqrif tasqagdlak
       61 vrnlqklmlr srsntlvsvr rvaqlnagrk tagidsktal lpqqkaelvd wvqqhaqswt
      121 aravkrvfip kangkqrplg ipvmadralq arvanalepe wearfesrsy gfrpgrgchd
      181 aieavfavtk gkrakrawil dadvaaafdh idhdhllaql gmfpargmia gwlkagvidr
      241 grfapteega pqgggatrgr tvvsgctkgg smlsmv
//
LOCUS       WP_235884309             336 aa            linear   BCT 02-MAR-2025
DEFINITION  integrase core domain-containing protein [Saccharopolyspora
            elongata].
ACCESSION   WP_235884309
VERSION     WP_235884309.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025063.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13683.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..336
                     /product="integrase core domain-containing protein"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=38375
     Region          27..308
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 mrlagwlsll grspaskdve llvlrhevav lhranpkprm dwadralfaa lirllpkalr
       61 ahrlvtpgtv lrwhrrlvar kwtypnrigr ppvdnavavl iermakenht wgyqriqgel
      121 lelghrvgas tirrvlkrlr ippapirctd ttwrqflrtq astmlacdff hvdcavtlkr
      181 vyvffvlevg sryvhllgat tnpdgawttq qardllmdld dratefrflv rdragqftas
      241 fdavladldi rvvktpprcp lancfaerfv rtvraeltdr llifgerhar avlaeyvrhy
      301 ngrrphraas farhgrstpl rtsamsrssa dqswva
//
LOCUS       WP_235884312             209 aa            linear   BCT 02-MAR-2025
DEFINITION  Hsp70 family protein, partial [Saccharopolyspora elongata].
ACCESSION   WP_235884312
VERSION     WP_235884312.1
KEYWORDS    RefSeq.
SOURCE      Saccharopolyspora elongata
  ORGANISM  Saccharopolyspora elongata
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE   1  (residues 1 to 209)
  AUTHORS   Bukau,B. and Horwich,A.L.
  TITLE     The Hsp70 and Hsp60 chaperone machines
  JOURNAL   Cell 92 (3), 351-366 (1998)
   PUBMED   9476895
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00012.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Saccharopolyspora elongata"
                     /db_xref="taxon:2530387"
     Protein         1..>209
                     /product="Hsp70 family protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
     Region          10..>207
                     /region_name="DnaK"
                     /note="Molecular chaperone DnaK (HSP70) [Posttranslational
                     modification, protein turnover, chaperones]; COG0443"
                     /db_xref="CDD:440212"
ORIGIN      
        1 matlspdivv psmatpgpdg tlltglaaan srnattnpal iargfkrrlg dptrlmlgga
       61 sytpaalmaa qlrdvlthis tahgggppat itltcpaiwg pyrreqfaev prlagiphyq
      121 litepeaaat hytnerrlgn geiiavydlg ggtfdttilr vqphgmeilg tpegiehmgg
      181 idfddtlrah lddkldgais tldpedptl
//
LOCUS       WP_235884336             683 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase domain-containing protein [Pedobacter
            hiemivivus].
ACCESSION   WP_235884336
VERSION     WP_235884336.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter hiemivivus
  ORGANISM  Pedobacter hiemivivus
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
REFERENCE   1  (residues 1 to 683)
  AUTHORS   Naumoff,D.G.
  TITLE     GH97 is a new family of glycoside hydrolases, which is related to
            the alpha-galactosidase superfamily
  JOURNAL   BMC Genomics 6, 112 (2005)
   PUBMED   16131397
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 683)
  AUTHORS   Liu,Y., Choudhury,P., Cabral,C.M. and Sifers,R.N.
  TITLE     Oligosaccharide modification in the early secretory pathway directs
            the selection of a misfolded glycoprotein for degradation by the
            proteasome
  JOURNAL   J Biol Chem 274 (9), 5861-5867 (1999)
   PUBMED   10026209
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019583.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07971.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Pedobacter hiemivivus"
                     /db_xref="taxon:2530454"
     Protein         1..683
                     /product="glycoside hydrolase domain-containing protein"
                     /calculated_mol_wt=77656
     Region          1..670
                     /region_name="COG3537"
                     /note="Putative alpha-1,2-mannosidase [Carbohydrate
                     transport and metabolism]"
                     /db_xref="CDD:442758"
ORIGIN      
        1 mlrliyclif llsgitsfaq spdqlvnvfl gssgdhgqls paasspfsql silpqtnptl
       61 htgyeylakn vlgfthnrle gvgcqgsggi ilikpflgke degqpltkia dsaspgsyti
      121 sfkegietni avdqnygmyn fsfptidkgf sidfshvfnq afvgekhtkn gdvisgwvka
      181 kttckvgiyt iyyamqidhi qkwqengthg lvvnldpkqk nvhvrvafsa vdeahaikml
      241 nknkevkist vreqsaqrwn nhlssvkveg drervklfys llyrtmqspy lisesdktfk
      301 gtdgklhltk snqyhgwaiw dnyktqlpll silfpdkyqd mihsigdlyr ygkydfagpq
      361 epansvrteh siavlldalk kgyvvdfkgl kdslladtar fdftkpdkyl eacydmwamg
      421 klfdnygeke lskhfferaq tyktvwnref kdlskkdvdr msvrnmyqgt irqyrwsvpf
      481 nvqglldlsg grqeftkqld dffdnyyfnr anepdlqspt lyyastkpwk yqklvqrial
      541 dtviqyyfnd nsrgigahid riyknepkaf vrtmdddaga msgwfvmtai glqqplvgep
      601 vyylnvplfs tvtlnggkap fvikvsnfed knryikgvtl ngnkldrlwi rhdeiqqggi
      661 leieagsvps dfgsrnmwis nln
//
LOCUS       WP_235884339             406 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4959 domain-containing protein [Pedobacter hiemivivus].
ACCESSION   WP_235884339
VERSION     WP_235884339.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter hiemivivus
  ORGANISM  Pedobacter hiemivivus
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027647.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16323.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Pedobacter hiemivivus"
                     /db_xref="taxon:2530454"
     Protein         1..406
                     /product="DUF4959 domain-containing protein"
                     /calculated_mol_wt=45014
     Region          20..125
                     /region_name="DUF4959"
                     /note="Domain of unknown function (DUF4959); pfam16323"
                     /db_xref="CDD:465093"
     Region          126..227
                     /region_name="DUF5126"
                     /note="Domain of unknown function (DUF5126); pfam17166"
                     /db_xref="CDD:465365"
     Region          252..403
                     /region_name="DUF5000"
                     /note="Domain of unknown function; pfam16391"
                     /db_xref="CDD:406724"
ORIGIN      
        1 mnikkyilpc livliagita ckknngfnai isedktkpla isnikidnfn gganitydlp
       61 nspnilyvla kykindntar etkssyyqdt vvvegfakek pyevtlytvs ranvmsdpvt
      121 vtvnpltpvy lavrpsisls pdfggvsvia dnplkkqigi vvmsynkntq smeiedqhft
      181 kdakinysvt gfasverqfg vyitdkwgni sdtlqkpiip lyeetmdktk fnllnlstds
      241 qiaydwftry lwdgkldgdg whtasgvslp yscsfgigkt yklsrfvvye rigdrytykf
      301 gnpkefslwg tnsstpdnir lpvradegav ignwvnlgnf rfpdppsgnl psasnsaded
      361 fvkkgvsfkv pftapsvkyl riavatiwgn eaaahlievt pygipe
//
LOCUS       WP_235884358             320 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Pedobacter hiemivivus].
ACCESSION   WP_235884358
VERSION     WP_235884358.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter hiemivivus
  ORGANISM  Pedobacter hiemivivus
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
REFERENCE   1  (residues 1 to 320)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Pedobacter hiemivivus"
                     /db_xref="taxon:2530454"
     Protein         1..320
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=35950
     Region          37..302
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mmlkftpmnt yllislglll scgtvkntgt tamdqqllkd veilssdsye grktntkgae
       61 marvyladrl ksigltpfpq lagyeqpfsf kngnkgling knmigyiegk sdqvivisah
      121 ydhigvinnq iyngaddnas gvaallkfaa yykdhkpnht lifaafdaee mglqgakafv
      181 anppgkldki imninmdmis hndkgelyac gtfkypslkn yfyttnpklk vlfghddpkl
      241 ghndwtnqsd hsafndknip fiyfgvedhk dyhkasdeyq ninktffida snsileiinn
      301 idkerdiqql freklqmkkq
//
LOCUS       WP_235884401             428 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6266 family protein [Pedobacter hiemivivus].
ACCESSION   WP_235884401
VERSION     WP_235884401.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter hiemivivus
  ORGANISM  Pedobacter hiemivivus
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039392.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19781.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Pedobacter hiemivivus"
                     /db_xref="taxon:2530454"
     Protein         1..428
                     /product="DUF6266 family protein"
                     /calculated_mol_wt=48225
     Region          11..209
                     /region_name="DUF6266"
                     /note="Family of unknown function (DUF6266); pfam19781"
                     /db_xref="CDD:437613"
     Region          240..407
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(279..285,302..303,326..328,341)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
ORIGIN      
        1 mariengilg gfngnlgpve gyvrygiayv rtkkrkrttp ptprekiqrk rmevvnnfvn
       61 smtdyvrigf eeaaqgkpis pnnaaksyql lhavqgeypd isinyaaarl tqgtielpln
      121 peaiaegngv rfnwsyntsl nwsdrgarvm llvyaqetgk syylfsgarm teetdflelp
      181 aevkgmqlqi ymsfiaddrr slsnsiylgn lvietldlnt mgisteqdse qsqdklsgkq
      241 ywdakwqsnt igwdigyasp aicqyldqyp nknasilipg cgnayeaeyl vksgftnitl
      301 idispeavkk irhkfehnsq ikvlaedffr hkgqydliie qtffcailpd kikkyakkta
      361 sllhekgkii gllfdkifer egppfggssp eykaifspyf diktmekcyn siaaragsev
      421 fivldkiq
//
LOCUS       WP_235884438             427 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Pedobacter hiemivivus].
ACCESSION   WP_235884438
VERSION     WP_235884438.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter hiemivivus
  ORGANISM  Pedobacter hiemivivus
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024831.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13439.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Pedobacter hiemivivus"
                     /db_xref="taxon:2530454"
     Protein         1..427
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=48692
     Region          4..365
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mnpkvliisp yfapsnaadt hrirmslpyf aqngwdaevv ivnqqhsdlm kdellkqsip
       61 agikihevsa fnkkwtakfg lgslalrsmw fykqkvdqll kaqkyeliyf sttqfplcil
      121 gaywkkrfgi pyvidmqdpw hsdyyqdkpk nqrpakywfs yrlnkylepl amkhvdglis
      181 vsaaylsvlq krypriarip savitfgvle adfviaksnk hqfkellnpg kvnivcvgrg
      241 gadmqkpvsl vfetlqkglq eepglfnqlh fyfigtsyap sgqglptilp iatkyqvqdh
      301 vteitdrisf yhtllslqqa dalfipgsdd pqytaskiyp yllskkplla ifhqdsnaid
      361 vinecstntt likfsdedsn sklsrvltdw anmslvplql tpqikkysat hltlrqtelf
      421 nraihqr
//
LOCUS       WP_235884479             401 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Bradyrhizobium frederickii].
ACCESSION   WP_235884479
VERSION     WP_235884479.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium frederickii
  ORGANISM  Bradyrhizobium frederickii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 401)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 401)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 401)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Bradyrhizobium frederickii"
                     /db_xref="taxon:2560054"
     Protein         1..401
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=43456
     Region          19..393
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(95,125,128,147,149,378..381,383,385)
                     /site_type="active"
                     /db_xref="CDD:173848"
ORIGIN      
        1 mdqptgpeag erahaemiak agalvphlre raarteelrh lppeterdlh daglfrmlqp
       61 ariggaeldy valvdcaell geadasvawn lanlashhwm lgmfeqkaqd lvwgrdpdvl
      121 iassfifpag ratrveggyq lrgswpfssg vascewnmla svvysedead gieyrifllp
      181 kgdynvldtw nvaglrgtgs cdvevrdafv adymtvavgd laggptpgsr anpnplyalp
      241 vfslfpyvls gvalgnaqac lddyievarh ristynrakl sdfqstqiki adasakidaa
      301 rlimrsacld amedarrghi pdmatktryr rdgsfsvnlc tdavsmlfaa sgarglftsg
      361 vlqrqfrdah ainshlafnf daagtnygrv alglpsenlt l
//
LOCUS       WP_235884535              48 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1236 domain-containing protein [Bradyrhizobium frederickii].
ACCESSION   WP_235884535
VERSION     WP_235884535.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium frederickii
  ORGANISM  Bradyrhizobium frederickii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018527.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06823.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..48
                     /organism="Bradyrhizobium frederickii"
                     /db_xref="taxon:2560054"
     Protein         1..48
                     /product="DUF1236 domain-containing protein"
                     /calculated_mol_wt=5753
     Region          <2..48
                     /region_name="DUF1236"
                     /note="Protein of unknown function (DUF1236); pfam06823"
                     /db_xref="CDD:429137"
ORIGIN      
        1 mpdsveveef pstvyrdapg lreyryihrd trtyviepre rrvieeid
//
LOCUS       WP_235884555              75 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Pedobacter hiemivivus].
ACCESSION   WP_235884555
VERSION     WP_235884555.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter hiemivivus
  ORGANISM  Pedobacter hiemivivus
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
REFERENCE   1  (residues 1 to 75)
  AUTHORS   Ren,J., Sainsbury,S., Nettleship,J.E., Saunders,N.J. and Owens,R.J.
  TITLE     The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals
            a novel protein fold incorporating a helix-turn-helix motif
  JOURNAL   Proteins 78 (7), 1798-1802 (2010)
   PUBMED   20196080
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013540.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01381.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Pedobacter hiemivivus"
                     /db_xref="taxon:2530454"
     Protein         1..75
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=8159
     Region          7..62
                     /region_name="HTH_XRE"
                     /note="Helix-turn-helix XRE-family like proteins.
                     Prokaryotic DNA binding proteins belonging to the
                     xenobiotic response element family of transcriptional
                     regulators; cl22854"
                     /db_xref="CDD:473980"
     Site            order(12,16,41)
                     /site_type="other"
                     /note="non-specific DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238045"
     Site            order(15,40)
                     /site_type="active"
                     /note="salt bridge [active]"
                     /db_xref="CDD:238045"
     Site            order(22..23,34,37,41..42)
                     /site_type="other"
                     /note="sequence-specific DNA binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238045"
ORIGIN      
        1 mhimkglasf vkekrklagl tqeefaerag valtvirkie qgketlnlss vnqvllmfgs
       61 tlapvstrei etetl
//
LOCUS       WP_235884567             413 aa            linear   BCT 02-MAR-2025
DEFINITION  aspartyl protease family protein [Pedobacter hiemivivus].
ACCESSION   WP_235884567
VERSION     WP_235884567.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter hiemivivus
  ORGANISM  Pedobacter hiemivivus
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025034.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13650.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Pedobacter hiemivivus"
                     /db_xref="taxon:2530454"
     Protein         1..413
                     /product="aspartyl protease family protein"
                     /calculated_mol_wt=46015
     Region          53..152
                     /region_name="Asp_protease_2"
                     /note="Aspartyl protease; pfam13650"
                     /db_xref="CDD:433378"
     Site            order(68,70,73,97..99,147)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133150"
     Site            68..70
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133150"
     Site            68
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133150"
     Site            order(97..100,104..107)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133150"
     Region          <192..317
                     /region_name="COG3577"
                     /note="Predicted aspartyl protease [General function
                     prediction only]"
                     /db_xref="CDD:442797"
     Region          329..>413
                     /region_name="CtpA"
                     /note="C-terminal processing protease CtpA/Prc, contains a
                     PDZ domain [Posttranslational modification, protein
                     turnover, chaperones]; COG0793"
                     /db_xref="CDD:440556"
ORIGIN      
        1 msiinfrklr iyplvliiqv cvvitaqgqq fyfkgdrnkd ampflqvknl iiiplylnnk
       61 gpynfildtg vgpliitdps lidsigikvs rtikisglgs gneieayisn dvsaqlgksy
      121 idniptailk rdifglsnyl gtkvygllgy yffksfvvel rystkrllfk hpnsggkikg
      181 eripieissy kpytnitien peygkaevkm lidngashai slerlnekpf pvpaasikan
      241 lgvgmsgpid gnigrvsalk igsfamknvl asypkyddva akvllkdrng nlgadilsrf
      301 nvifdyadns mylrknsqfk rpfehdmsgi elyledgqir ryfisriepg spaenagvlv
      361 ddeiitinft paasfklddi nslfksvegk tiilsirrnd elvlkvfklk qri
//
LOCUS       WP_235884710             100 aa            linear   BCT 02-MAR-2025
DEFINITION  AEC family transporter [Bradyrhizobium frederickii].
ACCESSION   WP_235884710
VERSION     WP_235884710.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium frederickii
  ORGANISM  Bradyrhizobium frederickii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015509.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03547.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Bradyrhizobium frederickii"
                     /db_xref="taxon:2560054"
     Protein         1..100
                     /product="AEC family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=9753
     Region          <2..72
                     /region_name="YfdV"
                     /note="Predicted permease, AEC (auxin efflux carrier)
                     family [General function prediction only]; COG0679"
                     /db_xref="CDD:440443"
ORIGIN      
        1 mcalklavmp aaafvlakll dlpplaagvv vlfaamptga nayifavqyq rlvnpvsgav
       61 algtllaavt lpvggvgggg vstchydpdd fafagghgad
//
LOCUS       WP_235884836             559 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: phosphoenolpyruvate hydrolase family protein
            [Bradyrhizobium].
ACCESSION   WP_235884836
VERSION     WP_235884836.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium
  ORGANISM  Bradyrhizobium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020927.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09370.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Bradyrhizobium"
                     /db_xref="taxon:374"
     Protein         1..559
                     /product="phosphoenolpyruvate hydrolase family protein"
                     /calculated_mol_wt=60888
     Region          1..241
                     /region_name="PEP_hydrolase"
                     /note="Phosphoenolpyruvate hydrolase-like; pfam09370"
                     /db_xref="CDD:430566"
     Region          <263..555
                     /region_name="AtoC"
                     /note="DNA-binding transcriptional response regulator,
                     NtrC family, contains REC, AAA-type ATPase, and a Fis-type
                     DNA-binding domains [Signal transduction mechanisms];
                     COG2204"
                     /db_xref="CDD:441806"
ORIGIN      
        1 mtaraaerag adfvlalnag rframggasp asilpirnsn efvagfgrte ilpntklpvf
       61 fgtctfdpel dldrwldrii kwgfagvtnf psvihidddr rslleksglg ysreiellvk
      121 aakrglmtia ytrtqsearr mveagaeaic infnlnrave sgsdpsisls elaartnava
      181 rvaqsvnkst icllgggpit kpdelldicr etgiqgfigg ssldrvplem svlevtsgfk
      241 tihllrekvd llerklqlsg frhgviaqss amkrvleitk rvaatpspvl iwgeagsgkr
      301 riaslvhafs drrhakatlf hcrpgpaidt lgplfgaerl esgrrqlsll easnegavll
      361 lhvdqlsreg qerladylet ggftplngvt vmrshariia tatvargagl etvlcarlld
      421 lftgldvqlp sltdrledlp qlvqhftvea kgdssaqtlt iensaflala ghdwpgnlre
      481 lrqvvnqlvt lpsthitgem lkplleptsg arpaaslser dwiiealkrn rlhrgktars
      541 lglsrktlyn kikklrile
//
LOCUS       WP_235884852             458 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF5623 domain-containing protein [Bradyrhizobium].
ACCESSION   WP_235884852
VERSION     WP_235884852.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium
  ORGANISM  Bradyrhizobium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036894.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18536.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Bradyrhizobium"
                     /db_xref="taxon:374"
     Protein         1..458
                     /product="DUF5623 domain-containing protein"
                     /calculated_mol_wt=50917
     Region          309..427
                     /region_name="DUF5623"
                     /note="Domain of unknown function (DUF5623); pfam18536"
                     /db_xref="CDD:465792"
ORIGIN      
        1 msndhirpss iegikqlakr fkksdgiqha valdkaskaa gfenykhalr klgdglaapg
       61 psaelyisvl wrdrttkvtg ceilkmplgr pldalvkpaq ykasrglgtm rregpdhlad
      121 tytassqeaa reaaceaart iqfieaarlv pskakrsfpr gqvqhrmpgs dhdaawfdpa
      181 aktfirtnep yshsvtreqk ewadrhgwav avspwkgmyr pdggtslfll admskgylle
      241 pmisrlveap apivasawdg esrpiapafv spgqvaeiet earevkrage rrssnnsvpy
      301 smflsgaqrr pktrmpiegh klvgrllksi ligtrtragv hrrvdairce ldnwvqceyr
      361 rdelsddvff dlyyhelpeg dalaavptsw drhilnldev katlvryype cpplrqllkk
      421 adlaiaslra wnvapthtgr lessdinrnr gpddggrl
//
LOCUS       WP_235884861             625 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein [Bradyrhizobium
            frederickii].
ACCESSION   WP_235884861
VERSION     WP_235884861.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium frederickii
  ORGANISM  Bradyrhizobium frederickii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 625)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Bradyrhizobium frederickii"
                     /db_xref="taxon:2560054"
     Protein         1..625
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=70180
     Region          36..597
                     /region_name="UvrD"
                     /note="Superfamily I DNA or RNA helicase [Replication,
                     recombination and repair]; COG0210"
                     /db_xref="CDD:439980"
     Region          36..249
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 mpdplrsddd hrdsdadqvi atcldldhpk sfflfagags gktrslveai nhvrqssgrr
       61 ltlsrqklgv itytnaacde ilrrldydpr idvstihafa wslisghned irmwvrnsla
      121 kriaeletti agtknrstkt yqenvrsles rrrrlaaldg ivkfvysptg dnrtrdalnh
      181 aeviaitsef ltskstlqrl lvsrypillv desqdtnrhl meallkvqrd naehfglgll
      241 gdtmqriyad gkvdlgqglh gwvfprkamn hrcpqrvirl lnrirsevdd vvqigrsdkp
      301 egcvrlfavq esasdkqrve qhvvdrmaei tgdqawkdqs rnfktltleh hmaavrfgfa
      361 emfrplyres riqtsllegt spslnffsrq vlpavkalqa ndafalasiv ressplltpe
      421 alksggseql kraknasdal lglftssnkp tfrevlenva tsglfdvpea lapfialeag
      481 ssddteerea sevlawreml gtdfqqieay deyvsgrspf gthqgvkgle fprvmvivsd
      541 eeargflfky dklfgvepps dtdrknlaag letsndrtrr llyvtcsrae eslaivcytk
      601 apkdllrhvv erhwfdasea eivvi
//
LOCUS       WP_235884957             210 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: group II intron maturase-specific domain-containing
            protein [Bradyrhizobium].
ACCESSION   WP_235884957
VERSION     WP_235884957.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium
  ORGANISM  Bradyrhizobium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae.
REFERENCE   1  (residues 1 to 210)
  AUTHORS   Centron,D. and Roy,P.H.
  TITLE     Presence of a group II intron in a multiresistant Serratia
            marcescens strain that harbors three integrons and a novel gene
            fusion
  JOURNAL   Antimicrob Agents Chemother 46 (5), 1402-1409 (2002)
   PUBMED   11959575
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019984.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08388.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Bradyrhizobium"
                     /db_xref="taxon:374"
     Protein         1..210
                     /product="group II intron maturase-specific
                     domain-containing protein"
                     /calculated_mol_wt=24206
     Region          <24..173
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 msgdvhvric erlgvklpra trrlvhcrte leaetlkvel qarlaechle mhptktkivy
       61 crdgnrkgny pnvsfdflgf cfrsrqvmns rtnslfggft pavspsamkt mretiralnl
      121 rrqthlslqe laseinpllr gwiayygryt rsalypflry vnqtlvawav rkfkrfrrtk
      181 agasqfflrl vkesaglfvh wrlgmtgtfa
//
LOCUS       WP_235884967              91 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Bradyrhizobium frederickii].
ACCESSION   WP_235884967
VERSION     WP_235884967.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium frederickii
  ORGANISM  Bradyrhizobium frederickii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13751.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Bradyrhizobium frederickii"
                     /db_xref="taxon:2560054"
     Protein         <1..91
                     /product="transposase"
     Region          <1..66
                     /region_name="transpos_IS5_1"
                     /note="IS5 family transposase; NF033578"
                     /db_xref="CDD:468095"
ORIGIN      
        1 yvagqkrgvt aaikrafrrr savepvighl knehrmnrnh lagtrgdaan avlaaagynf
       61 rililwlttl fvriccaflf agawssrqqt s
//
LOCUS       WP_235884973             141 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: recombination protein NinG, partial [Pseudomonadati].
ACCESSION   WP_235884973
VERSION     WP_235884973.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonadati
  ORGANISM  Pseudomonadati
            Bacteria.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   Tarkowski,T.A., Mooney,D., Thomason,L.C. and Stahl,F.W.
  TITLE     Gene products encoded in the ninR region of phage lambda
            participate in Red-mediated recombination
  JOURNAL   Genes Cells 7 (4), 351-363 (2002)
   PUBMED   11952832
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017572.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05766.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Pseudomonadati"
                     /db_xref="taxon:3379134"
     Protein         1..>141
                     /product="recombination protein NinG"
     Region          1..>141
                     /region_name="NinG"
                     /note="Bacteriophage Lambda NinG protein; pfam05766"
                     /db_xref="CDD:428621"
ORIGIN      
        1 makparrrck ndecrewfhp afanqwwcsp ecgtkialer rskerekaek aaekkrrree
       61 qkqkdklkir klalkprsyw ikqaqqavna firerdrdlp ciscgtltsa qwdaghyrtt
      121 aaapqlrfne rnihkqcvvc n
//
LOCUS       WP_235885009             397 aa            linear   BCT 02-MAR-2025
DEFINITION  antibiotic biosynthesis monooxygenase [Bradyrhizobium frederickii].
ACCESSION   WP_235885009
VERSION     WP_235885009.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium frederickii
  ORGANISM  Bradyrhizobium frederickii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 397)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015925.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03992.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Bradyrhizobium frederickii"
                     /db_xref="taxon:2560054"
     Protein         1..397
                     /product="antibiotic biosynthesis monooxygenase"
                     /calculated_mol_wt=43460
     Region          37..235
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
     Region          300..389
                     /region_name="YgiN"
                     /note="Quinol monooxygenase YgiN [Energy production and
                     conversion]; COG1359"
                     /db_xref="CDD:440970"
ORIGIN      
        1 mitglavgsm psaasaapdg mssaerneap lgarlqgvqh fgltvqnmgr ayqfytevlg
       61 gtevfrhgdf qgdgvqntll adqeieanmr gvnprtigvp dlrsgaqrld vrfiqfdnmv
      121 lellqyread qpmgsaksfa eplehmspaf prmmhicfyv rddvdfnkfi adleaesarr
      181 gmtqvranrt irvmteadrk aaprsantnr vtaepsngwe liyckgpege qlefvggarl
      241 ppvarrgadd lnvkdcimqk lvcnslgall faasmamtta svvaqeaprv ryqeipegay
      301 svvaqvraka gkedalraat lplidlvrgd pknlvyflqe drakpghfif yevfasqadf
      361 dahnampyvq awfaklpela dggvevlrma vlgvpkk
//
LOCUS       WP_235885014             293 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Bradyrhizobium
            frederickii].
ACCESSION   WP_235885014
VERSION     WP_235885014.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium frederickii
  ORGANISM  Bradyrhizobium frederickii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Bradyrhizobium frederickii"
                     /db_xref="taxon:2560054"
     Protein         1..293
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=32319
     Region          <118..269
                     /region_name="GlxA"
                     /note="Transcriptional regulator GlxA, contains an amidase
                     domain and an AraC-type DNA-binding HTH domain
                     [Transcription]; COG4977"
                     /db_xref="CDD:444002"
ORIGIN      
        1 mpedvtisrw tctqtgirhe eattppdryf faialkttra kltrgrhtif dgvmpagtly
       61 igapsqqlsa qfhapcdflh fhvsasryfp plrpgtgras aeglndlvll rdpfaeqlak
      121 aliershsad refarcigqa lamhlarral pqakvnalpk wrlrrvqeyv gthfdhcisl
      181 selakiagls rmhfaaqfra atgyrpreyl lhqrieraks lllnsetala evaltvgfct
      241 qahfstvfkr itgdtparwr casrnasaas rlsggdpast ckvmscvlpa gfs
//
LOCUS       WP_235885272             597 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: glycosyltransferase [Bradyrhizobium].
ACCESSION   WP_235885272
VERSION     WP_235885272.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium
  ORGANISM  Bradyrhizobium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae.
REFERENCE   1  (residues 1 to 597)
  AUTHORS   Zhang,Y.L., Arakawa,E. and Leung,K.Y.
  TITLE     Novel Aeromonas hydrophila PPD134/91 genes involved in O-antigen
            and capsule biosynthesis
  JOURNAL   Infect Immun 70 (5), 2326-2335 (2002)
   PUBMED   11953367
  REMARK    Erratum:[Infect Immun 2002 Jun;70(6):3308]
REFERENCE   2  (residues 1 to 597)
  AUTHORS   Swartley,J.S., Liu,L.J., Miller,Y.K., Martin,L.E., Edupuganti,S.
            and Stephens,D.S.
  TITLE     Characterization of the gene cassette required for biosynthesis of
            the (alpha1-->6)-linked N-acetyl-D-mannosamine-1-phosphate capsule
            of serogroup A Neisseria meningitidis
  JOURNAL   J Bacteriol 180 (6), 1533-1539 (1998)
   PUBMED   9515923
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025025.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13641.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Bradyrhizobium"
                     /db_xref="taxon:374"
     Protein         1..597
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=66648
     Region          113..347
                     /region_name="CESA_CelA_like"
                     /note="CESA_CelA_like are involved in the elongation of
                     the glucan chain of cellulose; cd06421"
                     /db_xref="CDD:133043"
     Site            203..205
                     /site_type="active"
                     /note="DXD motif [active]"
                     /db_xref="CDD:133043"
     Region          <295..495
                     /region_name="PLN02195"
                     /note="cellulose synthase A"
                     /db_xref="CDD:215124"
ORIGIN      
        1 mlspllaalg gaaiiiglrl tvlplldpsr wywralllgl aailswryvv wrftetlvpl
       61 dwtadalvsw gfatletgtv lsssiafmil srvkertaea dqhagwwlpg eapgvdifit
      121 tynepleile rtivcvkalr fpklrafvld dgrrdwlrqa cerhsvgyiv rsdnahakag
      181 ninhalvkra rdpdrpdfia ildadfvphf dfidrtvalf hdqsvglvqt pqhffnpdpi
      241 qhnlgisagy pdeqrhffdn vepardawgi aiccgtssvm rvraiqqigl lptqsvtedf
      301 lltlklaeng wqtvylnepl teglapeglk eyivqrgrwc lglmqiarnc ynpfgshrlg
      361 lmhrisvvds vlywlttfpf plaslifpll ywwlgitimn aslvditryy vpyyvmvlva
      421 lnwlskglfi pivndtsqli aawpicraaa lglltrgphr fsvtakggdr trvvvqwslm
      481 rpflilfglt lgglivplna dfvfntssta gdgvaivlfw tvynllvllv aiaacierpr
      541 ynrpqrqvle pitltiggdr hrgwlvnlgp egarisgpfg lsvgatgnlt ivrcqmi
//
LOCUS       WP_235885306             112 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5665 domain-containing protein [Paenibacillus cymbidii].
ACCESSION   WP_235885306
VERSION     WP_235885306.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus cymbidii
  ORGANISM  Paenibacillus cymbidii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040137.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18910.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Paenibacillus cymbidii"
                     /db_xref="taxon:1639034"
     Protein         1..112
                     /product="DUF5665 domain-containing protein"
                     /calculated_mol_wt=12193
     Region          47..104
                     /region_name="DUF5665"
                     /note="Domain of unknown function (DUF5665); pfam18910"
                     /db_xref="CDD:436823"
ORIGIN      
        1 msgskqkqgq aatveyglla diqrqvaels vnmerahiad yvqllanprk liwrnmvggi
       61 argvgiaigl tiftsvivyl lkalgalnlp ivgdfiadlv ehvqyqletk ry
//
LOCUS       WP_235885354              70 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6199 family natural product biosynthesis protein [Paenibacillus
            cymbidii].
ACCESSION   WP_235885354
VERSION     WP_235885354.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus cymbidii
  ORGANISM  Paenibacillus cymbidii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 70)
  AUTHORS   Smith,L., Hong,H., Spencer,J.B. and Leadlay,P.F.
  TITLE     Analysis of specific mutants in the lasalocid gene cluster:
            evidence for enzymatic catalysis of a disfavoured polyether ring
            closure
  JOURNAL   Chembiochem 9 (18), 2967-2975 (2008)
   PUBMED   19025863
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040350.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19701.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Paenibacillus cymbidii"
                     /db_xref="taxon:1639034"
     Protein         1..70
                     /product="DUF6199 family natural product biosynthesis
                     protein"
                     /calculated_mol_wt=7800
ORIGIN      
        1 mlifqlaawv fivigvlqai fprvgwylky gwqfknaeps naalvmnrig gilaaaigiy
       61 llsqhyffpl
//
LOCUS       WP_235885565             488 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase family 39 protein [Paenibacillus cymbidii].
ACCESSION   WP_235885565
VERSION     WP_235885565.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus cymbidii
  ORGANISM  Paenibacillus cymbidii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024629.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13231.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Paenibacillus cymbidii"
                     /db_xref="taxon:1639034"
     Protein         1..488
                     /product="glycosyltransferase family 39 protein"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=55085
ORIGIN      
        1 mekqqpllfl ivaavvlllg lglyrlsfwl dnypkrivip vvllvsfalq tailflfprl
       61 ptddsqtvls laqnmlyrgd yssfatsgyl hmfpfnfsiv lylktllslf pdnyliikcf
      121 nigftllttl tvyllykeln pwsqthdygv lvlaatyapa lfmnnfiynd viatalltsa
      181 lyfavrfmke lslkhmlgaa vllaagnyfr sigaifllai aigillqirr igvkksvlal
      241 gmtvvlfmvp gwaqnlllqa tgkvegsvta nsapvymwln mginvktfgf wdnrqsytiy
      301 qrqagydkkk sealfkneig rkwseadagd linmyykklv wmwtegtyqv erygvgngss
      361 tfgrgfgavg drysyttsat ewfkgsssar vgliwilyam nmvmygfmlv rliggiragr
      421 faetplvlvm lgfigfyllw eiksrylfpv yplvlamswm gfkdayaaif pnkekrnecq
      481 ttepvqfg
//
LOCUS       WP_235885286             186 aa            linear   BCT 02-MAR-2025
DEFINITION  trehalose-6-phosphate synthase [Bradyrhizobium frederickii].
ACCESSION   WP_235885286
VERSION     WP_235885286.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium frederickii
  ORGANISM  Bradyrhizobium frederickii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Campbell,J.A., Davies,G.J., Bulone,V. and Henrissat,B.
  TITLE     A classification of nucleotide-diphospho-sugar glycosyltransferases
            based on amino acid sequence similarities
  JOURNAL   Biochem J 326 (Pt 3) (Pt 3), 929-939 (1997)
   PUBMED   9334165
  REMARK    Erratum:[Biochem J 1998 Feb 1;329(Pt 3):719]
REFERENCE   2  (residues 1 to 186)
  AUTHORS   Kaasen,I., McDougall,J. and Strom,A.R.
  TITLE     Analysis of the otsBA operon for osmoregulatory trehalose synthesis
            in Escherichia coli and homology of the OtsA and OtsB proteins to
            the yeast trehalose-6-phosphate synthase/phosphatase complex
  JOURNAL   Gene 145 (1), 9-15 (1994)
   PUBMED   8045430
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013173.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00982.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Bradyrhizobium frederickii"
                     /db_xref="taxon:2560054"
     Protein         1..186
                     /product="trehalose-6-phosphate synthase"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_process="GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=21036
     Region          3..>134
                     /region_name="trehalose_OtsA"
                     /note="alpha,alpha-trehalose-phosphate synthase
                     [UDP-forming]; TIGR02400"
                     /db_xref="CDD:274112"
ORIGIN      
        1 mklvvisnrg arfdpnepqt gglaaglkpi lecseavwmf ssdirgegte kplplekagk
       61 ghvakldlpv ehyqgyyrdy snstlwpalh slsdrisrtq egyrsyremn dfiaraafgl
      121 qdrdafwvhd yhllswsrks eqrdkwsfcl tagkidprir rddeqtstae phsgfqgegg
      181 tcrrqg
//
LOCUS       WP_235885566             418 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Bradyrhizobium niftali].
ACCESSION   WP_235885566
VERSION     WP_235885566.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium niftali
  ORGANISM  Bradyrhizobium niftali
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13458.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Bradyrhizobium niftali"
                     /db_xref="taxon:2560055"
     Protein         1..418
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=45881
     Region          33..333
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mtagigaava apfvgrsafa aqpivlgipy cqtaaagvad hqdflngttl ameeinaagg
       61 vlgrplklft tdmnvlspes skqalaacvd akvdaisfaf tlvplpamda tvkykcpyin
      121 gnaqrggtsa vkaqpdkysh ifqfcpsevn ygwnyalwle deeqrgvwkp knrkvhiiqe
      181 qigycqtisr aaqeaikrrg kfevaritdi qypvqdwapv iremkevdaa aimvdhwvaa
      241 eyaafckqfm aspvrdslvy lqygpsqpef lelagsaang fvwgttmgiy gderglayrq
      301 kykkrfpgia glaytgiayd qtyylkkawe avgdprkfse vcdwiranpq rgvcgyvdmg
      361 npyqealhfp dnggdelqaq kleagvaqly vqiqggehki vypgpvsetk lisapwws
//
LOCUS       WP_235885638             409 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class III-fold pyridoxal phosphate-dependent
            enzyme [Bradyrhizobium niftali].
ACCESSION   WP_235885638
VERSION     WP_235885638.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium niftali
  ORGANISM  Bradyrhizobium niftali
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 409)
  AUTHORS   Shen,B.W., Hennig,M., Hohenester,E., Jansonius,J.N. and Schirmer,T.
  TITLE     Crystal structure of human recombinant ornithine aminotransferase
  JOURNAL   J Mol Biol 277 (1), 81-102 (1998)
   PUBMED   9514741
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012428.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00202.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Bradyrhizobium niftali"
                     /db_xref="taxon:2560055"
     Protein         1..409
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /calculated_mol_wt=44256
     Region          7..384
                     /region_name="HemL"
                     /note="Glutamate-1-semialdehyde aminotransferase [Coenzyme
                     transport and metabolism]; COG0001"
                     /db_xref="CDD:439772"
ORIGIN      
        1 mflpeqwpty fksakgaevv dldgktyldm sycgigatil gfadpdvdaa vktaidmgsm
       61 stlncaedie laellvelhp wadmvrfgra ggeamaiavr iaraatgrdm vafcgyhgwh
      121 dwylsanlge ttaldghllp gldtkgvprg laglmhpfhf nkldeieaiv aahgerlaai
      181 vmepvrssep epafikgira ladrcgamli fdevtsgfri nsggahlayg vapdmavfak
      241 aiangfpmaa ivgrasvmda aqetfvssta wtervgpvaa latlrkhreq nvarhlmrig
      301 sriqkgwtea sqatgmplhv sgisplghfa fdlpdaqevr tlftqmmldr gilatgsfya
      361 mwshtdahvd ryletvnevf rdlrtavdqk avkqllrgpv ahsgfkrlt
//
LOCUS       WP_235885697             750 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Paenibacillus cymbidii].
ACCESSION   WP_235885697
VERSION     WP_235885697.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus cymbidii
  ORGANISM  Paenibacillus cymbidii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 750)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Paenibacillus cymbidii"
                     /db_xref="taxon:1639034"
     Protein         1..750
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=85896
     Region          5..>247
                     /region_name="AcoR"
                     /note="Transcriptional regulator DhaR of acetoin/glycerol
                     metabolism [Transcription]; COG3284"
                     /db_xref="CDD:442514"
     Region          138..736
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 msgvggiqel vaesrqfcke igmdpkdipf pqvvmtseel erkrkeyeei lsvvqffgdk
       61 vlnslkgtpl llsvtnesgy ilhmmgdeti rnmvnqlgir pgiqfteeim gtnvvnlslk
      121 yhdrpiqcig tdhyheylhq tacyavafhn wdlnqllgsv vimtgiqfqn plmvtmlstt
      181 vdsierelml rkqnrsldfl nqilmdnarn givltdrkge vigfshsaqi itgvpkerii
      241 hqsvqtlqpm gafisevlrn eqkyediqie ieesnlvclf dafplydehk qltgafgqfr
      301 diteryeaqe kynylanhde ltglpnrryy keraiallqk akeeemndpi afiyldldrf
      361 kivndtlghs ngdlllkqva nrlvgclepg dlaarmggde fmfllprvtd pgqviqrvdr
      421 mlmlfqqpys mdgyqfhita sigislypdd aqdiemlmih adtamynakr rgknrfaiya
      481 aemntkshek immesslrla lennefrlyy qpqidiktgq ikgvealirw lhpergivpp
      541 sefialaeet gliiqldqwv lrtaclqqnl wrekglppir vsvnlssqqf tsdalvtsvr
      601 eilqetnldp slldleitet mtmdveytiq tlqqlhelgv qisiddfgtg ysslnylkrf
      661 sidrlkvdqs fvrdilsdtn dadivgtiia mahnlglevv aegvetkeql rflqyqkcne
      721 vqgyyfsrpi ppeeiemkyl nmldlvkkiy
//
LOCUS       WP_235885715             303 aa            linear   BCT 02-MAR-2025
DEFINITION  6-bladed beta-propeller [Paenibacillus cymbidii].
ACCESSION   WP_235885715
VERSION     WP_235885715.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus cymbidii
  ORGANISM  Paenibacillus cymbidii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028479.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17170.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Paenibacillus cymbidii"
                     /db_xref="taxon:1639034"
     Protein         1..303
                     /product="6-bladed beta-propeller"
                     /calculated_mol_wt=34291
     Region          34..301
                     /region_name="NHL"
                     /note="NHL repeat unit of beta-propeller proteins;
                     cl18310"
                     /db_xref="CDD:302697"
     Region          69..111
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271328"
     Region          123..160
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271328"
     Region          168..207
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271328"
     Region          273..300
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271328"
ORIGIN      
        1 mgnstrvyei aegwaklpdh ikfgythgie idsndnvyvf htekhpvvvf drdgnfvrsf
       61 gddlfdggah gfylhvengq evfyttdvkk cqmvkmtlng evlltigtpd lpniydsekr
      121 fvptdvcvgp ngdiyiadgy gqswvhqyta agdyirswgg kgkgpgelac phgisidtrs
      181 gepevyvadr gnnriqvftl egelkrivtn didypdnfyf fgdelyfpdl hsrvtifdkn
      241 dklichlged qqaykqqgwp nlppewyrvd kfssphgicv dkrgdvyvae wtingrvtkl
      301 vrq
//
LOCUS       WP_235885754             622 aa            linear   BCT 02-MAR-2025
DEFINITION  FTR1 family protein [Bradyrhizobium niftali].
ACCESSION   WP_235885754
VERSION     WP_235885754.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium niftali
  ORGANISM  Bradyrhizobium niftali
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 622)
  AUTHORS   Stearman,R., Yuan,D.S., Yamaguchi-Iwai,Y., Klausner,R.D. and
            Dancis,A.
  TITLE     A permease-oxidase complex involved in high-affinity iron uptake in
            yeast
  JOURNAL   Science 271 (5255), 1552-1557 (1996)
   PUBMED   8599111
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015213.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03239.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Bradyrhizobium niftali"
                     /db_xref="taxon:2560055"
     Protein         1..622
                     /product="FTR1 family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_component="GO:0033573 - high-affinity iron permease
                     complex [Evidence IEA]"
                     /GO_function="GO:0005381 - iron ion transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0034755 - iron ion transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=66197
     Region          <107..199
                     /region_name="TsdA"
                     /note="Thiosulfate dehydrogenase TsdA, contains C-terminal
                     cytochrome c domain [Inorganic ion transport and
                     metabolism]; COG3258"
                     /db_xref="CDD:442489"
     Region          368..621
                     /region_name="FTR1"
                     /note="High-affinity Fe2+/Pb2+ permease [Inorganic ion
                     transport and metabolism]; COG0672"
                     /db_xref="CDD:440436"
ORIGIN      
        1 mfavvllgpa kaetgdvett wrlldyiavd yagavahgqv sspseyaeqn efaatvaekl
       61 hglpakpeka allgeadrlk raiadkaepe qvaeiahrla aallaaypvp lapakapdla
      121 rgaasfgrnc agchgeagdg hgpeaakldt ppiaftdadr arqrsvfgly lvitqgldgt
      181 amtsfeglps derwalafya gqfafsdaaa aegerlwkqe pslhrllpdl kaligttpaa
      241 faarigqdka dalmaylrrh pealtqqdgs lslvrarlte svdavragdr kragelalsa
      301 yldgfepiep altasdrtlm erieglmgey raavqgesvd alskrvqvld glldnaqaal
      361 spdatsalst flgaatillr egleallivv amiaflrkae rtevmpyvhv gwvgallagl
      421 ltwavatwvi gisgasrelt egfgsvfaav vllsvgiwmh gkaqadqwqr yirermskal
      481 sggsawflfv lafvvvyrev fetilfyaal whqgnggail agalsactal tvmawamlry
      541 ssrlpigkff iysswlmavl tvvlagkgis alqeagivgi splhavprls lvgffpttqt
      601 vaaqivmiva lalgfalnrr kv
//
LOCUS       WP_235885829             420 aa            linear   BCT 02-MAR-2025
DEFINITION  phospholipid carrier-dependent glycosyltransferase [Bradyrhizobium
            niftali].
ACCESSION   WP_235885829
VERSION     WP_235885829.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium niftali
  ORGANISM  Bradyrhizobium niftali
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 420)
  AUTHORS   Tavares-Carreon,F., Fathy Mohamed,Y., Andrade,A. and Valvano,M.A.
  TITLE     ArnT proteins that catalyze the glycosylation of lipopolysaccharide
            share common features with bacterial N-oligosaccharyltransferases
  JOURNAL   Glycobiology 26 (3), 286-300 (2016)
   PUBMED   26515403
REFERENCE   2  (residues 1 to 420)
  AUTHORS   Petrou,V.I., Herrera,C.M., Schultz,K.M., Clarke,O.B., Vendome,J.,
            Tomasek,D., Banerjee,S., Rajashankar,K.R., Belcher Dufrisne,M.,
            Kloss,B., Kloppmann,E., Rost,B., Klug,C.S., Trent,M.S., Shapiro,L.
            and Mancia,F.
  TITLE     Structures of aminoarabinose transferase ArnT suggest a molecular
            basis for lipid A glycosylation
  JOURNAL   Science 351 (6273), 608-612 (2016)
   PUBMED   26912703
REFERENCE   3  (residues 1 to 420)
  AUTHORS   Gentzsch,M. and Tanner,W.
  TITLE     The PMT gene family: protein O-glycosylation in Saccharomyces
            cerevisiae is vital
  JOURNAL   EMBO J 15 (21), 5752-5759 (1996)
   PUBMED   8918452
REFERENCE   4  (residues 1 to 420)
  AUTHORS   Martin-Blanco,E. and Garcia-Bellido,A.
  TITLE     Mutations in the rotated abdomen locus affect muscle development
            and reveal an intrinsic asymmetry in Drosophila
  JOURNAL   Proc Natl Acad Sci U S A 93 (12), 6048-6052 (1996)
   PUBMED   8650217
REFERENCE   5  (residues 1 to 420)
  AUTHORS   Lussier,M., Gentzsch,M., Sdicu,A.M., Bussey,H. and Tanner,W.
  TITLE     Protein O-glycosylation in yeast. The PMT2 gene specifies a second
            protein O-mannosyltransferase that functions in addition to the
            PMT1-encoded activity
  JOURNAL   J Biol Chem 270 (6), 2770-2775 (1995)
   PUBMED   7852348
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014425.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02366.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Bradyrhizobium niftali"
                     /db_xref="taxon:2560055"
     Protein         1..420
                     /product="phospholipid carrier-dependent
                     glycosyltransferase"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0000030 - mannosyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006493 - protein O-linked glycosylation
                     [Evidence IEA]"
                     /calculated_mol_wt=45968
     Region          2..420
                     /region_name="PMT1"
                     /note="Dolichyl-phosphate-mannose--protein O-mannosyl
                     transferase [Posttranslational modification, protein
                     turnover, chaperones]; COG1928"
                     /db_xref="CDD:441531"
ORIGIN      
        1 msrsaviava iflmahlall iglttpekfv fdevhyvpaa rqmlapvmsq pmlnpmhppl
       61 akeliaasia afgdnalgwr ypatlfgala ivaiylcgla lfaaqgpaia aaliaafnqm
      121 lyvqariaml difalgfgll ataafmhgfr rerphalfav agclfgcaaa ckwsglfplg
      181 icivivavir lmqgwhtlfa darpddwyrp dlwpdfrtph valcfavlpa mtylaafvpl
      241 dglslpdlie aqrrifadnt ttaiaghtym sswpswplla rpvwflfdkt aedivsaivf
      301 lgnplvlwpa laalaivlrd vvvarrwdaf liaafyfgpw lawallprtl gfiyyylpaa
      361 tvaslalvyv lcrnglprwl lwayvglaai gfaimlpisa aflgtsmqgf nrlmlfqswi
//
LOCUS       WP_235885850             553 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Paenibacillus cymbidii].
ACCESSION   WP_235885850
VERSION     WP_235885850.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus cymbidii
  ORGANISM  Paenibacillus cymbidii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 553)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 553)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 553)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 553)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Paenibacillus cymbidii"
                     /db_xref="taxon:1639034"
     Protein         1..553
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=60392
     Region          65..549
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mkqkrigtal aatlllgsvt aacssnssss gsssspskap astspgasas aapaaatypl
       61 ktdktltywg elpgnlvgvk sshadtpffq ewqkktgvpi kfttvpanqg keqlnillas
      121 gdlpdmieyn ftndfpggpe kaikdgyilr lndvidkwap nlkkylkehp evdkmaktds
      181 gsyyvfpfir gddylkvfqg pivrkdwlde lglpvpttid ewyttlkafk ekkgataaas
      241 fvglprplne fgngaflgaf gvtrnfytdn gtikfgpmep gykeflgtfr kwyaeglldk
      301 nlatvdtkam danfangatg atvgnagggi grwqpiveak nakaqlvgap ypvktkgqia
      361 pfgqkdfafa pggsvaisak sknielavrl ldygysdegh myfnfgaegv sykmengypk
      421 ytdllmknpd klapaqamsm yiranyngpy vqdkryieqy lalptqrdav ttwqktdvdk
      481 hqlppitptp eessefakim tdvntlvdem tlkiilgtes ldnfdqyvsk lkslkidrai
      541 eiqkaaldry nkr
//
LOCUS       WP_235885861             792 aa            linear   BCT 02-MAR-2025
DEFINITION  NEL-type E3 ubiquitin ligase domain-containing protein
            [Bradyrhizobium niftali].
ACCESSION   WP_235885861
VERSION     WP_235885861.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium niftali
  ORGANISM  Bradyrhizobium niftali
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 792)
  AUTHORS   Quezada,C.M., Hicks,S.W., Galan,J.E. and Stebbins,C.E.
  TITLE     A family of Salmonella virulence factors functions as a distinct
            class of autoregulated E3 ubiquitin ligases
  JOURNAL   Proc Natl Acad Sci U S A 106 (12), 4864-4869 (2009)
   PUBMED   19273841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025849.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14496.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Bradyrhizobium niftali"
                     /db_xref="taxon:2560055"
     Protein         1..792
                     /product="NEL-type E3 ubiquitin ligase domain-containing
                     protein"
                     /GO_function="GO:0004842 - ubiquitin-protein transferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0016567 - protein ubiquitination [Evidence
                     IEA]"
                     /calculated_mol_wt=87723
     Region          193..785
                     /region_name="PRK15370"
                     /note="type III secretion system effector E3 ubiquitin
                     transferase SlrP"
                     /db_xref="CDD:185268"
     Region          231..247
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          249..269
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          270..290
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          291..311
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          333..353
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          354..374
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          375..416
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          417..437
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          438..459
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          462..486
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
ORIGIN      
        1 mdafnhlhpv eapdverayd delgqqqeyq agfqqhlnel hpherppqns nnlsdrdvvs
       61 nrdadflrmp hgdrvgqgts rlpsdspafs gqgvnqdllf pgadrsgqlp agsfsltdsw
      121 hgvdaaadwp tqsfdqeehw waepgdvvpe wpttaaipwq qdlgvsilgr qprpgdgstt
      181 dladpvlrql rldhildtwt geegqtqded rqeavrrira waeagdvyag lelhdlglrt
      241 lpaalppglq slnvsdnelv rlpdtlpsgl rtlgasnnrl tdlpdtlptg lqslvigsnq
      301 ltglpetlpq slstlavcsn rltslpdnlp aglqdldvrg nlltclpdtl ptglqslalg
      361 snrltslpdt lppelkelea dgnrltslpd tlpaelqllf ardnrlnslp etlptelqrl
      421 hvsgnslssl penlptelqm learnnrltr lpetlltrlg sgcmvyvedn alpeqvrtnl
      481 aaalnapsya gprvffsmgg gtmvdqerpl anavadwlkg epeaiavwqn faheegapey
      541 alfldklrkt vnydnpefre avaedlrqaa irpelrrqff elaygasetc qdrvtltwng
      601 mqtarlnadv edgayddrlg eliqqarvlf rlnalqpiar qkvdslgfvd evevylayqv
      661 klrerldlql iapdmrffdv ahvteddlta aeiqvrneea tgfadylatr wqpwemvvsr
      721 iapqahaqme grlreamdee fpsrleqrla dhqltgdsda elqfgaqise eiareikgpl
      781 mrqvlgdrgl al
//
LOCUS       WP_235885868              37 aa            linear   BCT 02-MAR-2025
DEFINITION  3-keto-5-aminohexanoate cleavage protein [Bradyrhizobium niftali].
ACCESSION   WP_235885868
VERSION     WP_235885868.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium niftali
  ORGANISM  Bradyrhizobium niftali
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 37)
  AUTHORS   Bastard,K., Smith,A.A., Vergne-Vaxelaire,C., Perret,A.,
            Zaparucha,A., De Melo-Minardi,R., Mariage,A., Boutard,M.,
            Debard,A., Lechaplais,C., Pelle,C., Pellouin,V., Perchat,N.,
            Petit,J.L., Kreimeyer,A., Medigue,C., Weissenbach,J.,
            Artiguenave,F., De Berardinis,V., Vallenet,D. and Salanoubat,M.
  TITLE     Revealing the hidden functional diversity of an enzyme family
  JOURNAL   Nat Chem Biol 10 (1), 42-49 (2014)
   PUBMED   24240508
REFERENCE   2  (residues 1 to 37)
  AUTHORS   Bellinzoni,M., Bastard,K., Perret,A., Zaparucha,A., Perchat,N.,
            Vergne,C., Wagner,T., de Melo-Minardi,R.C., Artiguenave,F.,
            Cohen,G.N., Weissenbach,J., Salanoubat,M. and Alzari,P.M.
  TITLE     3-Keto-5-aminohexanoate cleavage enzyme: a common fold for an
            uncommon Claisen-type condensation
  JOURNAL   J Biol Chem 286 (31), 27399-27405 (2011)
   PUBMED   21632536
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017652.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05853.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..37
                     /organism="Bradyrhizobium niftali"
                     /db_xref="taxon:2560055"
     Protein         1..37
                     /product="3-keto-5-aminohexanoate cleavage protein"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /GO_function="GO:0043720 - 3-keto-5-aminohexanoate
                     cleavage activity [Evidence IEA]"
                     /GO_process="GO:0019475 - L-lysine catabolic process to
                     acetate [Evidence IEA]"
                     /calculated_mol_wt=3464
     Region          <2..36
                     /region_name="BKACE"
                     /note="beta-keto acid cleavage enzyme; cl15827"
                     /db_xref="CDD:472835"
ORIGIN      
        1 mlattnaelv ahaagilksl ggsvatanea ramlgla
//
LOCUS       WP_235885890             101 aa            linear   BCT 02-MAR-2025
DEFINITION  inorganic diphosphatase [Bradyrhizobium niftali].
ACCESSION   WP_235885890
VERSION     WP_235885890.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium niftali
  ORGANISM  Bradyrhizobium niftali
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012922.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00719.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Bradyrhizobium niftali"
                     /db_xref="taxon:2560055"
     Protein         1..101
                     /product="inorganic diphosphatase"
                     /GO_component="GO:0005737 - cytoplasm [Evidence IEA]"
                     /GO_function="GO:0000287 - magnesium ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA]"
                     /GO_process="GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /calculated_mol_wt=11568
     Region          <2..98
                     /region_name="Ppa"
                     /note="Inorganic pyrophosphatase [Energy production and
                     conversion]; COG0221"
                     /db_xref="CDD:439991"
ORIGIN      
        1 mlilhdaqty pgvvlrcrpv gileveqksk gkkerndrvf avpdrsplet dlkdirklps
       61 harddleqff ratnalenke lkflgwhgpr raakairrla r
//
LOCUS       WP_235885914             189 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6470 family protein [Paenibacillus cymbidii].
ACCESSION   WP_235885914
VERSION     WP_235885914.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus cymbidii
  ORGANISM  Paenibacillus cymbidii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039791.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20074.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Paenibacillus cymbidii"
                     /db_xref="taxon:1639034"
     Protein         1..189
                     /product="DUF6470 family protein"
                     /calculated_mol_wt=21426
     Region          7..180
                     /region_name="DUF6470"
                     /note="Family of unknown function (DUF6470); pfam20074"
                     /db_xref="CDD:437906"
ORIGIN      
        1 mipfpqieir qtpaklgida dlgeysirqp katyemkrip sqleihsqqa dmkidqmraw
       61 dalglgnvle smhriyaqar tvalqgieri vqdgnrmaai htgenaiaei akrwgqsrqe
      121 fdyygpasid nvdvefhark pnivvtdgri evnarpnrpe idytrgkldi yvlqygkvdi
      181 mppqidlkl
//
LOCUS       WP_235885924             552 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Bradyrhizobium niftali].
ACCESSION   WP_235885924
VERSION     WP_235885924.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium niftali
  ORGANISM  Bradyrhizobium niftali
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 552)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 552)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Bradyrhizobium niftali"
                     /db_xref="taxon:2560055"
     Protein         1..552
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=61768
     Region          7..87
                     /region_name="DUF6538"
                     /note="Domain of unknown function (DUF6538); pfam20172"
                     /db_xref="CDD:466323"
     Region          245..546
                     /region_name="XerD"
                     /note="Site-specific recombinase XerD [Replication,
                     recombination and repair]; COG4974"
                     /db_xref="CDD:443999"
ORIGIN      
        1 mlfrvvrpmr rdgsrfplfv qripadvrrk vvgfelaipl gdgfvfvtps egaqavrfsl
       61 rttepseakr rqalvaahla tvweafrnda pvhlthrqat alagelyrvw adsegharsv
      121 amvhtpgvgw apdtenqeeq eahwaavtem wervggdgea kklekalgpi vdrllltkgi
      181 rrvdtesral lltafwmalr dafasrqrna kgdysldaka arfpewqapa dalkekpkrg
      241 askssltglv edwwkeakra grkqstyesy rnsmarlvtf lkhdtanrvt pedivrfkdy
      301 rvqggvspkt vkdsdlagmk tvfgwavvnr rlhsnpaegi tikvgksrkl rskgfydsea
      361 iailkharef apgreapkla aakrwvpwlc aftggrvgem iqirkedirr egklwvlhvt
      421 peagpvktde ardvvlhrqi ieegfveffe kskggylfid pkagelgvrn aiktarnkvn
      481 efvrevvkdk nvdpshgwrh rfktvgidqg vemrvldaiq ghaprnvseg ygdvtikaka
      541 samakypsid va
//
LOCUS       WP_235885923             678 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein [Paenibacillus cymbidii].
ACCESSION   WP_235885923
VERSION     WP_235885923.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus cymbidii
  ORGANISM  Paenibacillus cymbidii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 678)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Paenibacillus cymbidii"
                     /db_xref="taxon:1639034"
     Protein         1..678
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
                     /calculated_mol_wt=73697
     Region          19..654
                     /region_name="FusA"
                     /note="Translation elongation factor EF-G, a GTPase
                     [Translation, ribosomal structure and biogenesis];
                     COG0480"
                     /db_xref="CDD:440248"
ORIGIN      
        1 meqrtrdtwr dggikkimer mrnigifahv dagktttteh llyisghirt lgsvdsgtaq
       61 tdwldverer gisvraastt fgwrgytinl vdtpghvdfl severslrvm dgaivivsav
      121 egvqaqteti whalrkqrmp allymnkldr igarpaqvaa eiaklltdra vpiqaplgqg
      181 esfrgvaelw ggeepampag eleqarqaal eklaecddrv lerylagesi assearaiag
      241 elarrselhp llygasskgi gvaellqaav dflpspagra dkplsavvfk lerdktmgrl
      301 afvrvydgsi rnrdtvrnft ggteekvtqi rlidgrkhed agiveaggia alcglqharv
      361 gdvlgvpdav ppaqhlalpl ltvqvkaasd alypaltaal qelseedphl daqwlaeerg
      421 lhlkvmgniq leiianllqs rfgltatfgq psiiyketps ragygfiayt mpkpcwailr
      481 faiepgergs glryrslvrt ddllaqyqne verrvpeall qglrgwevtd lavtlvegqh
      541 hvwhthpldf avatpmgimq glaetgttll epllhfriav peeyggkvla elaqmratfe
      601 ppsvaggrlt vegtmpaats leypvklssq tggrgtiats fagyapappd vqaerqrrgv
      661 npldqakyil sarkalsv
//
LOCUS       WP_235885921             127 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Bradyrhizobium niftali].
ACCESSION   WP_235885921
VERSION     WP_235885921.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium niftali
  ORGANISM  Bradyrhizobium niftali
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 127)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Bradyrhizobium niftali"
                     /db_xref="taxon:2560055"
     Protein         1..127
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=13382
     Region          16..126
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(105..108,110)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 mipaspdgss dvppdvlive ddpiiaidfe drllgfgvts vrtvgsvaqa laaiaarapd
       61 falldvelsr eksfavaerl aaleipfvfv tgygdetria pdfvnrprlq kpcssdalea
      121 alrsrgs
//
LOCUS       WP_235885948             634 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxyl transferase domain-containing protein [Paenibacillus
            cymbidii].
ACCESSION   WP_235885948
VERSION     WP_235885948.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus cymbidii
  ORGANISM  Paenibacillus cymbidii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 634)
  AUTHORS   Zhang,H., Yang,Z., Shen,Y. and Tong,L.
  TITLE     Crystal structure of the carboxyltransferase domain of
            acetyl-coenzyme A carboxylase
  JOURNAL   Science 299 (5615), 2064-2067 (2003)
   PUBMED   12663926
REFERENCE   2  (residues 1 to 634)
  AUTHORS   Thornton,C.G., Kumar,G.K., Haase,F.C., Phillips,N.F., Woo,S.B.,
            Park,V.M., Magner,W.J., Shenoy,B.C., Wood,H.G. and Samols,D.
  TITLE     Primary structure of the monomer of the 12S subunit of
            transcarboxylase as deduced from DNA and characterization of the
            product expressed in Escherichia coli
  JOURNAL   J Bacteriol 175 (17), 5301-5308 (1993)
   PUBMED   8366018
REFERENCE   3  (residues 1 to 634)
  AUTHORS   Toh,H., Kondo,H. and Tanabe,T.
  TITLE     Molecular evolution of biotin-dependent carboxylases
  JOURNAL   Eur J Biochem 215 (3), 687-696 (1993)
   PUBMED   8102604
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013225.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01039.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Paenibacillus cymbidii"
                     /db_xref="taxon:1639034"
     Protein         1..634
                     /product="carboxyl transferase domain-containing protein"
                     /calculated_mol_wt=67853
     Region          23..>142
                     /region_name="sucB"
                     /note="2-oxoglutarate dehydrogenase complex
                     dihydrolipoamide succinyltransferase (E2 component);
                     TIGR01347"
                     /db_xref="CDD:273565"
     Region          120..618
                     /region_name="MmdA"
                     /note="Acetyl-CoA carboxylase, carboxyltransferase
                     component [Lipid transport and metabolism]; COG4799"
                     /db_xref="CDD:443827"
ORIGIN      
        1 mnnlaenngn qaashnetti greiaaepga taehgataeh gataepgata epgaaaepga
       61 taepgaaaep gitaepgita epgitaalre taalretaap gitaapgata eeaaarqpvw
      121 qpelaemarr heyaqrlgga eniarqhasg rltvreridl lldegsfhei gaftgtasyd
      181 eqgnlldvsp ssivmgngri drrkvfvvgd dftvrggsse saspekmvya ermacdwrmp
      241 lirlvntagg siklleknqs tkipgyaqwp igrmlgvvpv vgaalgacag lgalrvahsh
      301 fsvmvkgssq vfaagpsvvt pgvkeevsne elggsavhar gsglvdneav deqdacrqia
      361 aflsylpssv fqlpprkqtd ddparmeeql asivprerrr vyrmrsilel vfdkgslfem
      421 gryyarsvit mfgtingypv gimandpmms agalsdsasd kiirfvdmcd tfhlpvvnfv
      481 dqpgvsvgsa aeekgtvrka lrammaiqqv svpwctffvr rcfglagcaw gpddgrsnir
      541 yawpsaywgs ipveggveaa ykrelaasgn aeerrlelvd yyrrfespfr taerfrieei
      601 idprstrpll aewaedaygl lpgqlgvkgr tmrv
//
LOCUS       WP_235885963             518 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Bradyrhizobium niftali].
ACCESSION   WP_235885963
VERSION     WP_235885963.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium niftali
  ORGANISM  Bradyrhizobium niftali
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Bradyrhizobium niftali"
                     /db_xref="taxon:2560055"
     Protein         1..518
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=57768
     Region          31..503
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mktcdrrtvl klvgglsllp stsifaqdag rtalriamqd lrveldplhp ratalvsfrv
       61 lesiydklfa idyqrdgqir pmlaesieal dntkyrvslr kgvqfhdgee ltaedvaftf
      121 gaermlakds pgygvgqisf psmsgvratg rhtvefstka pdpvfvkrlt sygagivsks
      181 aylkaatfdq warapiaagp yrvveavenr yirleahegy wggrpplkgi efrmvrepaa
      241 rvaglragdf diittvapdq fdilaadnrl dvvggdtmsf rtlvydsttn evlrdprmrr
      301 amnlaidrqt vvnsiwrkri svppshqhla ygalynpdrp iprynpeeak rllaeagykg
      361 aaipfktvgn yytaelietq aiaamwravg lnvdiqmken waqvedrlgr gvnnssdgty
      421 ypdptasfvs rwgsqsnfqr ggywrndrfn vlettlltaq dpaqrraayq emldifdeid
      481 ppgtvlhslg effgkranik wtptptglmd frpgainv
//
LOCUS       WP_235885968             414 aa            linear   BCT 02-MAR-2025
DEFINITION  Wadjet anti-phage system protein JetD domain-containing protein
            [Bradyrhizobium niftali].
ACCESSION   WP_235885968
VERSION     WP_235885968.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium niftali
  ORGANISM  Bradyrhizobium niftali
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 414)
  AUTHORS   Doron,S., Melamed,S., Ofir,G., Leavitt,A., Lopatina,A., Keren,M.,
            Amitai,G. and Sorek,R.
  TITLE     Systematic discovery of antiphage defense systems in the microbial
            pangenome
  JOURNAL   Science 359 (6379) (2018)
   PUBMED   29371424
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09983.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Bradyrhizobium niftali"
                     /db_xref="taxon:2560055"
     Protein         1..414
                     /product="Wadjet anti-phage system protein JetD
                     domain-containing protein"
                     /calculated_mol_wt=44913
     Region          251..>321
                     /region_name="TOPRIM"
                     /note="Topoisomerase-primase domain. This is a nucleotidyl
                     transferase/hydrolase domain found in type IA, type IIA
                     and type IIB topoisomerases, bacterial DnaG-type primases,
                     small primase-like proteins from bacteria and archaea, OLD
                     family nucleases from...; cl00718"
                     /db_xref="CDD:469888"
     Site            order(256..257,260,309,311,313)
                     /site_type="active"
                     /db_xref="CDD:173774"
     Site            order(256,309)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:173774"
ORIGIN      
        1 marrftdaig llndlldrfe agatspiahp dyaafssvva adaflnqirk aesagavsig
       61 wgrgakrdqv ahvrlasaei lypyldrtpa sriaedaaar liagvalhes lknsgsqiae
      121 vwargktwhg fgssdvdtlr hafvlaqail dnkhldvdyk tfsrrtvghs kileriegav
      181 vrllsgimdf ppgarpreal raiglerfap plliagkidl dgadlsgisp hylgispkea
      241 drvrfreppa yiltienfas fnrhiaeadp grlgttmyvg gypslatqqa lrtiarlvse
      301 etpifhwsdi dpdgtwifrt ieravdrpig phlmsvevae rlgqvpfkks aparcppdsg
      361 iaalaaylae dgaktleqee ldpvlpelhe kmradqrgvd pdelpgstis vglc
//
LOCUS       WP_235885985              82 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Bradyrhizobium niftali].
ACCESSION   WP_235885985
VERSION     WP_235885985.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium niftali
  ORGANISM  Bradyrhizobium niftali
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 82)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Bradyrhizobium niftali"
                     /db_xref="taxon:2560055"
     Protein         1..82
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=8541
     Region          <1..54
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
     Region          <28..82
                     /region_name="PfVFT1-like"
                     /note="Plasmodium falciparum Venus Flytrap protein PfVFT1
                     and similar proteins; cd22854"
                     /db_xref="CDD:439369"
ORIGIN      
        1 mvkaiialgr rlhmrvtveg vetasqaafl dtadghqvqg vffgrpvpts elgasilagf
       61 aramppaspm tklhvdnata er
//
LOCUS       WP_235886017             289 aa            linear   BCT 02-MAR-2025
DEFINITION  cysteine peptidase family C39 domain-containing protein
            [Bradyrhizobium niftali].
ACCESSION   WP_235886017
VERSION     WP_235886017.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium niftali
  ORGANISM  Bradyrhizobium niftali
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 289)
  AUTHORS   Havarstein,L.S., Diep,D.B. and Nes,I.F.
  TITLE     A family of bacteriocin ABC transporters carry out proteolytic
            processing of their substrates concomitant with export
  JOURNAL   Mol Microbiol 16 (2), 229-240 (1995)
   PUBMED   7565085
REFERENCE   2  (residues 1 to 289)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015377.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03412.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Bradyrhizobium niftali"
                     /db_xref="taxon:2560055"
     Protein         1..289
                     /product="cysteine peptidase family C39 domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=32261
     Region          43..>226
                     /region_name="SunT"
                     /note="ABC-type bacteriocin/lantibiotic exporters, contain
                     an N-terminal double-glycine peptidase domain [Defense
                     mechanisms]; COG2274"
                     /db_xref="CDD:441875"
ORIGIN      
        1 mkvprlqpwr dlillpgnkr aikskttgss ggggatleav rqdtglqcla lllrfhqiav
       61 dpaqiahqfa gsvlgiqeml rcanqlklka ravreswsgl sklslpaiie rhdgsfailg
      121 kagaddvlih dpainrpqvv kraefeqgwt grivlmtrra slfdlarkfd vtwflqamhk
      181 yrrllgevlv asfflqlfal vtplffqvvt dkvlahrgyt tldvlvfrpl glnrvapfqr
      241 aaqekqshnd reggepeesw ngrlivyvgn vqheaqqdsn qrvrypiqg
//
LOCUS       WP_235886029             228 aa            linear   BCT 02-MAR-2025
DEFINITION  replication protein [Paenibacillus cymbidii].
ACCESSION   WP_235886029
VERSION     WP_235886029.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus cymbidii
  ORGANISM  Paenibacillus cymbidii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 228)
  AUTHORS   Zylicz,M., Gorska,I., Taylor,K. and Georgopoulos,C.
  TITLE     Bacteriophage lambda replication proteins: formation of a mixed
            oligomer and binding to the origin of lambda DNA
  JOURNAL   Mol Gen Genet 196 (3), 401-406 (1984)
   PUBMED   6239082
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016381.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04492.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Paenibacillus cymbidii"
                     /db_xref="taxon:1639034"
     Protein         1..228
                     /product="replication protein"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /calculated_mol_wt=26739
     Region          7..77
                     /region_name="Phage_rep_O"
                     /note="Bacteriophage replication protein O; cl04545"
                     /db_xref="CDD:471049"
ORIGIN      
        1 mtspenftmv pnplqdwlmt aelnmtqfri vhavirrtyg frepwayftq sylakmtncn
       61 qrqaarelia lvdsgvller yesgqrliri npkiaskssd aydsldipsy dsldigayds
      121 ldiqinkdik erdkktytsi sksndpyvkt ylrifeifln kkhmrvsekq sefihqhiek
      181 irawgidike wtrqvdehfa klpasnngni iafleasdry fevrrhey
//
LOCUS       WP_235885960             568 aa            linear   BCT 02-MAR-2025
DEFINITION  ethylbenzene dehydrogenase-related protein [Bradyrhizobium
            niftali].
ACCESSION   WP_235885960
VERSION     WP_235885960.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium niftali
  ORGANISM  Bradyrhizobium niftali
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 568)
  AUTHORS   Kloer,D.P., Hagel,C., Heider,J. and Schulz,G.E.
  TITLE     Crystal structure of ethylbenzene dehydrogenase from Aromatoleum
            aromaticum
  JOURNAL   Structure 14 (9), 1377-1388 (2006)
   PUBMED   16962969
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021010.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09459.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Bradyrhizobium niftali"
                     /db_xref="taxon:2560055"
     Protein         1..568
                     /product="ethylbenzene dehydrogenase-related protein"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=63049
     Region          17..169
                     /region_name="Ni_hydr_CYTB"
                     /note="Prokaryotic cytochrome b561; pfam01292"
                     /db_xref="CDD:426183"
     Region          210..565
                     /region_name="DOMON_like_cytochrome"
                     /note="DOMON-like domain of an uncharacterized protein
                     family; cd09625"
                     /db_xref="CDD:187683"
     Site            order(324,326,371,382,544..546,548,560)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:187683"
ORIGIN      
        1 mterslaqtk phegpprtdv gtitlhwata lafvvslvtg lriaadalra pfskwlapvl
       61 pqgeifswhf laglavffcg sayvaylars glvernspkk trilamrapa rlkwgavnvi
      121 lhwfvyalvi fltatgvmmy lgyggwwayl hstaayvalv yifahvaahy lyggwlqifr
      181 vfrpaplaia kavrprpllv aaaigvavac gvagvdwatr dtlvvarvsd apkldgamgd
      241 pawsrarpvf irtqqganlg gsgeslvevr alhdgqkiyf afrwedptrs lrripiikke
      301 dgwhvldera glqdavdfye dklsvifsdn pslggagatd lgtnplpgkp mpingrgfhf
      361 ttdgsyidmw qwkasrggml grvdsqyigp pyaptldeqn ydaryqggyw nkpgrslysy
      421 nfkfirrndk gpvtvlrlpk dwkaqvaals kfdlnpdssd dengrwymfd wesepytpea
      481 daripvgttl pgviiagdte geranvtgvs kwsnghwtle ltrnmksdgr ydkafvpard
      541 lymwvavfdh aqtrhathnr pvrvvtqd
//
LOCUS       WP_235886037             116 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6711 family protein [Paenibacillus cymbidii].
ACCESSION   WP_235886037
VERSION     WP_235886037.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus cymbidii
  ORGANISM  Paenibacillus cymbidii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042749.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20458.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Paenibacillus cymbidii"
                     /db_xref="taxon:1639034"
     Protein         1..116
                     /product="DUF6711 family protein"
                     /calculated_mol_wt=12947
     Region          3..115
                     /region_name="DUF6711"
                     /note="Family of unknown function (DUF6711); pfam20458"
                     /db_xref="CDD:466607"
ORIGIN      
        1 mavliingvd mptpsamtpg eedigkwdrn argtmigeiv atkakfelsw sfltaeqlsq
       61 llnaikptff nvtytdpvdn llrtalfykg grsmpvmdyr ngaprykdvk fniier
//
LOCUS       WP_235886290             915 aa            linear   BCT 02-MAR-2025
DEFINITION  SNF2 helicase associated domain-containing protein [Paenibacillus
            cymbidii].
ACCESSION   WP_235886290
VERSION     WP_235886290.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus cymbidii
  ORGANISM  Paenibacillus cymbidii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 915)
  AUTHORS   Lindback,T. and Kolsto,A.B.
  TITLE     A Bacillus cereus member of the SNF2 family
  JOURNAL   Microbiology (Reading) 143 (Pt 1), 171-174 (1997)
   PUBMED   9025290
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020044.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08455.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Paenibacillus cymbidii"
                     /db_xref="taxon:1639034"
     Protein         1..915
                     /product="SNF2 helicase associated domain-containing
                     protein"
                     /calculated_mol_wt=102332
     Region          2..510
                     /region_name="SWIM"
                     /note="Uncharacterized protein, contains SWIM-type Zn
                     finger domain [Function unknown]; COG4715"
                     /db_xref="CDD:443750"
     Region          259..640
                     /region_name="SNF2_assoc"
                     /note="Bacterial SNF2 helicase associated; pfam08455"
                     /db_xref="CDD:462483"
     Region          646..850
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(674..680,774)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350770"
ORIGIN      
        1 msptltldei kdacgftsyt hgrsyfqagr vtslsynpdt lshkaavtgs kryrvtvsid
       61 dvegiegsct cpafypnyfc khiaavlfki hspqtsyvqr sasattlpmt asastapapg
      121 iskrdilltn sllslfssss satargtaet deplcveyiv naharsssip lfsleikigp
      181 krplvvqkin ellknikqnq khfftnsfsy dpalhtfgel dqmiidqlve vhrvdvayrs
      241 qfgssysggy rfhnadrhll ippnawekll pllvqasarl yvdemgqgai tvtneplplk
      301 frlseaneqg yrldsvglke ivpmpdygfa ivvnrlhkld pslltriael rtafqpqaaq
      361 easmhvwipv nkmdpfldrv vpqfrrighv diaehitdri mnaplrskly ldltnellta
      421 rlefhygdiv ltaaniqaph tppeerrilv rdsqqeqqvl dflrqvewap srsdslelad
      481 eqavykflyh llpqletvsd iyvtsalraa mhktthtpka svdidhrtnw lhvqfslegi
      541 ddsdirtilr slvekkkyvk lsggaflsle addfqelgdf idetgirske lssgsiklpi
      601 mrgfalldak esmpqvklgk alremfdnlr npdnlefavp dslspimrdy qkigfqwmgt
      661 lshygfggil addmglgktl qaiafllser qrntipdtpp alivcpaslv ynwrnelhkf
      721 apelrtavaa ggklersgvl deladidvli tsypllrrdl dqytvqrfsc lildeaqaik
      781 nhttqtaqav kdiqadkrfa ltgtpvenra eelwsifdav fpdlfagkda fnklkpeqia
      841 mrvrlfvlrr neagraqgta rqnrnrttas rrlqqkqden fgrpdkaaan llppgavrre
      901 lqggfrqaga vaghc
//
LOCUS       WP_235886307             332 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase [Paenibacillus cymbidii].
ACCESSION   WP_235886307
VERSION     WP_235886307.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus cymbidii
  ORGANISM  Paenibacillus cymbidii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014237.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02156.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Paenibacillus cymbidii"
                     /db_xref="taxon:1639034"
     Protein         1..332
                     /product="glycosyl hydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /calculated_mol_wt=37091
     Region          29..311
                     /region_name="Glyco_hydro_26"
                     /note="Glycosyl hydrolase family 26; cl21700"
                     /db_xref="CDD:473934"
ORIGIN      
        1 mailllllsl lfpsvllpal palaqsapvn asasaeavkv lrelndmtgk riftgqhdyl
       61 espdewnnri reltgqyaki hgyelgpimn qservasaqr qgvvnsaiaw nksgglvtis
      121 yhesipgmcr cwsnvktsms qerfnqfvtp gtheydllia eldktasylk qlgdagvpvl
      181 wrpyhemngd wfwwggktnf kalwnlmydr fvnvhrldnl lwvwspnapn gtadpfepyy
      241 pgddkvdvla ldiynndyqq gyydklvala qgkpvaigen gelpgdevlk aqpkwvymms
      301 wanlltekns aqsiasffaa srsvkkedaa vp
//
LOCUS       WP_235886336             274 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Paenibacillus cymbidii].
ACCESSION   WP_235886336
VERSION     WP_235886336.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus cymbidii
  ORGANISM  Paenibacillus cymbidii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 274)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Paenibacillus cymbidii"
                     /db_xref="taxon:1639034"
     Protein         1..274
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=29147
     Region          9..>152
                     /region_name="RocR"
                     /note="RocR-type transcriptional regulator, contains PAS,
                     AAA-type ATPase, and DNA-binding Fis domains
                     [Transcription, Signal transduction mechanisms]; COG3829"
                     /db_xref="CDD:443041"
     Region          <117..271
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
ORIGIN      
        1 mtgklhmfle tmetyqkaia ddsiiaitdr ekfigylsip glavnfpmgt pidaipnsit
       61 rkalnaqttl reergpeafg fpyvatatpi wengeivgal tvstttakmt tlrgvsehla
      121 asaeqmtatt eqlagasaem aeqvralaae seqvlreldn irsiaqlvke vseqshllgl
      181 naaieaarag ehgrgfnvva gevrkmaeqs kssaasidge ldnieaavkr mnadirgita
      241 kfgvhvasik elqaayehva asaddilqaa rtpq
//
LOCUS       WP_235886425              76 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6110 family protein, partial [Streptococcus pneumoniae].
ACCESSION   WP_235886425
VERSION     WP_235886425.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040326.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19605.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..76
                     /product="DUF6110 family protein"
     Region          1..69
                     /region_name="DUF6110"
                     /note="Family of unknown function (DUF6110); pfam19605"
                     /db_xref="CDD:437437"
ORIGIN      
        1 lflggvafgt lglkilaske akkgyskala kayklkdeld asvsvvkqhg ddvlqdakyl
       61 yeqekkeeql dslige
//
LOCUS       WP_235886404             646 aa            linear   BCT 02-MAR-2025
DEFINITION  S-layer homology domain-containing protein [Paenibacillus
            cymbidii].
ACCESSION   WP_235886404
VERSION     WP_235886404.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus cymbidii
  ORGANISM  Paenibacillus cymbidii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 646)
  AUTHORS   Mesnage,S., Fontaine,T., Mignot,T., Delepierre,M., Mock,M. and
            Fouet,A.
  TITLE     Bacterial SLH domain proteins are non-covalently anchored to the
            cell surface via a conserved mechanism involving wall
            polysaccharide pyruvylation
  JOURNAL   EMBO J 19 (17), 4473-4484 (2000)
   PUBMED   10970841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012613.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00395.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Paenibacillus cymbidii"
                     /db_xref="taxon:1639034"
     Protein         1..646
                     /product="S-layer homology domain-containing protein"
                     /calculated_mol_wt=70691
     Region          44..85
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          173..215
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          252..319
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
     Region          314..395
                     /region_name="Glucodextran_B"
                     /note="Glucodextranase, domain B; pfam09136"
                     /db_xref="CDD:430428"
     Region          398..464
                     /region_name="Glucodextran_B"
                     /note="Glucodextranase, domain B; pfam09136"
                     /db_xref="CDD:430428"
     Region          482..562
                     /region_name="Glucodextran_B"
                     /note="Glucodextranase, domain B; pfam09136"
                     /db_xref="CDD:430428"
ORIGIN      
        1 mkkfliamlv avmmaavpls viaddnvlqn qavnggvinq niifididqd ywaydaiadm
       61 skrgvingyd detfkpqnsi treefaklia mtfsldlpnp eqptfadvqp drwsysyiea
      121 akefltgyfp pkgksfyspe tkttredvav alvkvlgytp ddledpnile rnfvdvnems
      181 fglrdyiala tekqlisgyd dytfrpenpi traevatlly rsikssamdq geaplldvsm
      241 pattssgtyy isgktnknak vtingkeikv dngefkegfr lekegtynis ivaknagnkq
      301 ttvtktitfe qegpklvidd lpatttsqti dvsgqvtdns dknasvylnd qkldvygssf
      361 rrtvtlqege nelvfkakns agktttvvrt itlnlggpal kiddipestt sqtlsvsgtv
      421 kdnndknptv ylndekldvy gssfsrtvtl qegenvlvfk aknsggkttt vtktiqlnlg
      481 gpvltiddmp ettkrqslsv sgtvkdkndk nptvylndek ldvygssfsr tvtlqqgenv
      541 lvfkaknsgg kvtlitktvv fnpegpklnv nyvpetssqs tvsvsgtvtd vndsspgvyv
      601 ndsklytygs sfdksvslqk gnntivvkat nkfgqtttvt knvyyp
//
LOCUS       WP_235886426             604 aa            linear   BCT 02-MAR-2025
DEFINITION  RICH domain-containing protein, partial [Streptococcus pneumoniae].
ACCESSION   WP_235886426
VERSION     WP_235886426.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016920.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05062.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         1..>604
                     /product="RICH domain-containing protein"
     Region          1..>544
                     /region_name="PspC_subgroup_1"
                     /note="pneumococcal surface protein PspC, choline-binding
                     form; NF033838"
                     /db_xref="CDD:468201"
     Region          311..389
                     /region_name="RICH"
                     /note="RICH domain; pfam05062"
                     /db_xref="CDD:428286"
     Region          <519..601
                     /region_name="TOPEUc"
                     /note="DNA Topoisomerase I (eukaryota); smart00435"
                     /db_xref="CDD:214661"
ORIGIN      
        1 mfaskserkv hysirkfsig vasvvvaslv mgsvvhaten egitqvatsy nkanesqteh
       61 rkaakqvded ikkmlseiqe yikkmlseiq ldkrkhtqnv nlnrklsaiq tkylyelrvl
      121 kekskkeelt sktkkeldaa fekfkkepel tkklaeakqk akaqkeedfr nyptntyktl
      181 eleiaefdvk vkeaelelvk eeakprneek ikqakakves kkaeatrlee ikterkkaee
      241 eakrkaeese kkaaeakqkv dtkeqgkpkr rakrgvsgel atpdkkenda kssdssvgee
      301 tlpspslnma nesqtehrkd vdeyikkmls eiqldrrkht qnvnlnikls aiktkylyel
      361 svlkenskke eltsktkael taafeqfkkd tlkpekkvae aekkveeakk kakdqkeedr
      421 rnyptntykt leleiaesdv kvkkaelelv keeanesrne ekikqakekv eskkaeatrl
      481 ekiktdrkka aeeakrkaee sekkaaeakq kvdaeeyale akiaeleyev qrlekelkei
      541 desdsedylk eglraplqsk ldtkkaklsk leelsdkide ldaeiaklev qlkdaegnnn
      601 veay
//
LOCUS       WP_235886427             119 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerate kinase, partial [Streptococcus pneumoniae].
ACCESSION   WP_235886427
VERSION     WP_235886427.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 119)
  AUTHORS   Cusa,E., Obradors,N., Baldoma,L., Badia,J. and Aguilar,J.
  TITLE     Genetic analysis of a chromosomal region containing genes required
            for assimilation of allantoin nitrogen and linked glyoxylate
            metabolism in Escherichia coli
  JOURNAL   J Bacteriol 181 (24), 7479-7484 (1999)
   PUBMED   10601204
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014634.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02595.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         1..>119
                     /product="glycerate kinase"
                     /GO_function="GO:0008887 - glycerate kinase activity
                     [Evidence IEA]"
                     /GO_process="GO:0031388 - organic acid phosphorylation
                     [Evidence IEA]"
     Region          2..>90
                     /region_name="PRK10342"
                     /note="glycerate kinase I; Provisional; cl00841"
                     /db_xref="CDD:469950"
ORIGIN      
        1 mkiviapdsf kesltaqqva eaikrgfqqs iadvecllcp vgdggegtvd airhsldlke
       61 kwiqvtdpfg qkeamryfqk gelalfevad kaiphsadfn inrlltpspi atvlslesf
//
LOCUS       WP_235886431             210 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase [Streptococcus pneumoniae].
ACCESSION   WP_235886431
VERSION     WP_235886431.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         1..210
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=23683
     Region          <2..99
                     /region_name="Peptidases_S8_S53"
                     /note="Peptidase domain in the S8 and S53 families;
                     cl10459"
                     /db_xref="CDD:415849"
ORIGIN      
        1 mdrlgnlsdf snkgdsdaiy apagstlsls elglnnfina ekykedwifs atlggytyly
       61 gnsfaapkvs gaiamiidky klkdqpynym fvkkileetl pvkngikvln ipnvlrydln
      121 mlqleykneq swdsfidnvn lieleeriqt tigikqinth niitiaregy sqnylpntse
      181 ntynslqvsl vgvlllfism vnilwakksk
//
LOCUS       WP_235886888              61 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Streptococcus pneumoniae].
ACCESSION   WP_235886888
VERSION     WP_235886888.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 61)
  AUTHORS   Vertes,A.A., Inui,M., Kobayashi,M., Kurusu,Y. and Yukawa,H.
  TITLE     Isolation and characterization of IS31831, a transposable element
            from Corynebacterium glutamicum
  JOURNAL   Mol Microbiol 11 (4), 739-746 (1994)
   PUBMED   8196545
REFERENCE   2  (residues 1 to 61)
  AUTHORS   van der Zee,A., Agterberg,C., van Agterveld,M., Peeters,M. and
            Mooi,F.R.
  TITLE     Characterization of IS1001, an insertion sequence element of
            Bordetella parapertussis
  JOURNAL   J Bacteriol 175 (1), 141-147 (1993)
   PUBMED   8093238
REFERENCE   3  (residues 1 to 61)
  AUTHORS   Johansen,E. and Kibenich,A.
  TITLE     Isolation and characterization of IS1165, an insertion sequence of
            Leuconostoc mesenteroides subsp. cremoris and other lactic acid
            bacteria
  JOURNAL   Plasmid 27 (3), 200-206 (1992)
   PUBMED   1325060
REFERENCE   4  (residues 1 to 61)
  AUTHORS   Cirillo,J.D., Barletta,R.G., Bloom,B.R. and Jacobs,W.R. Jr.
  TITLE     A novel transposon trap for mycobacteria: isolation and
            characterization of IS1096
  JOURNAL   J Bacteriol 173 (24), 7772-7780 (1991)
   PUBMED   1660454
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013753.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01610.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..61
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..61
                     /product="transposase"
     Region          <3..46
                     /region_name="transpos_ISL3"
                     /note="ISL3 family transposase; NF033550"
                     /db_xref="CDD:468079"
ORIGIN      
        1 ekivnalqlh ysnakleatn nliklikcna fgfrnfenfk krifialnik kertkfvlsr
       61 a
//
LOCUS       WP_235887048             195 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein
            [Streptococcus pneumoniae].
ACCESSION   WP_235887048
VERSION     WP_235887048.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 195)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         1..195
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=21456
     Region          <2..174
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 msvdaanrae ylisnkvdii lanftvtder kkqvdfalpy mkvslgvvsp ktglitdvkq
       61 legktlivtk gttaetyfek nhpeiklqky dqysdsyqal ldgrgdafst dntevlawal
      121 enkgfevgit slgdpdtiaa avqkgnqell dfinkdiekl gkenffhkay ektlhptygd
      181 takaddlvve ggkvd
//
LOCUS       WP_235887059             265 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 88 protein, partial [Streptococcus
            pneumoniae].
ACCESSION   WP_235887059
VERSION     WP_235887059.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 265)
  AUTHORS   Mori,S., Akao,S., Miyake,O., Nankai,H., Hashimoto,W., Mikami,B. and
            Murata,K.
  TITLE     Crystallization and preliminary X-ray analysis of a novel
            unsaturated glucuronyl hydrolase from Bacillus sp. GL1
  JOURNAL   Acta Crystallogr D Biol Crystallogr 59 (Pt 5), 946-949 (2003)
   PUBMED   12777820
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019113.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07470.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         1..>265
                     /product="glycoside hydrolase family 88 protein"
     Region          66..>226
                     /region_name="LanC_like"
                     /note="Cyclases involved in the biosynthesis of
                     lantibiotics, and similar proteins; cl04955"
                     /db_xref="CDD:471159"
ORIGIN      
        1 mikkvtieei ksperflevp lltkeevgqa idkvirqlel nldyfkedfp tpatfdnvyp
       61 imdntewtng fwtgelwlay eysqqdefkn iahknvlsfl drvnkrveld hhdlgflytp
      121 scmaeyking dgegreaalk aadklieryq ekggfiqawg dlgkkehyrl iidcllniql
      181 lffayqetgd qkyydiaesh fyvsannvir ddassfhtfy fdpetgqplk pqlftpnlkt
      241 iqnpclsldp gwflfspngc flldk
//
LOCUS       WP_235887061             118 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Streptococcus pneumoniae].
ACCESSION   WP_235887061
VERSION     WP_235887061.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 118)
  AUTHORS   Vertes,A.A., Inui,M., Kobayashi,M., Kurusu,Y. and Yukawa,H.
  TITLE     Isolation and characterization of IS31831, a transposable element
            from Corynebacterium glutamicum
  JOURNAL   Mol Microbiol 11 (4), 739-746 (1994)
   PUBMED   8196545
REFERENCE   2  (residues 1 to 118)
  AUTHORS   van der Zee,A., Agterberg,C., van Agterveld,M., Peeters,M. and
            Mooi,F.R.
  TITLE     Characterization of IS1001, an insertion sequence element of
            Bordetella parapertussis
  JOURNAL   J Bacteriol 175 (1), 141-147 (1993)
   PUBMED   8093238
REFERENCE   3  (residues 1 to 118)
  AUTHORS   Johansen,E. and Kibenich,A.
  TITLE     Isolation and characterization of IS1165, an insertion sequence of
            Leuconostoc mesenteroides subsp. cremoris and other lactic acid
            bacteria
  JOURNAL   Plasmid 27 (3), 200-206 (1992)
   PUBMED   1325060
REFERENCE   4  (residues 1 to 118)
  AUTHORS   Cirillo,J.D., Barletta,R.G., Bloom,B.R. and Jacobs,W.R. Jr.
  TITLE     A novel transposon trap for mycobacteria: isolation and
            characterization of IS1096
  JOURNAL   J Bacteriol 173 (24), 7772-7780 (1991)
   PUBMED   1660454
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013753.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01610.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..>118
                     /product="transposase"
     Region          <1..>95
                     /region_name="transpos_ISL3"
                     /note="ISL3 family transposase; NF033550"
                     /db_xref="CDD:468079"
ORIGIN      
        1 iststvirkl ndfhfkhdfs clpeimswde yaftkgkmsf iaqdfnnlni itvlegrtqa
       61 iirnhflryd rvvrcrvkii tmdmfspyyd lakqlrfqis rlrlkqsprl fhsrmlks
//
LOCUS       WP_235887070             264 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease subunit S, partial [Streptococcus
            pneumoniae].
ACCESSION   WP_235887070
VERSION     WP_235887070.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 264)
  AUTHORS   Janscak,P. and Bickle,T.A.
  TITLE     The DNA recognition subunit of the type IB restriction-modification
            enzyme EcoAI tolerates circular permutions of its polypeptide chain
  JOURNAL   J Mol Biol 284 (4), 937-948 (1998)
   PUBMED   9837717
REFERENCE   2  (residues 1 to 264)
  AUTHORS   Bickle,T.A. and Kruger,D.H.
  TITLE     Biology of DNA restriction
  JOURNAL   Microbiol Rev 57 (2), 434-450 (1993)
   PUBMED   8336674
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01420.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..264
                     /product="restriction endonuclease subunit S"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
     Region          100..262
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
ORIGIN      
        1 synrleqldk efpdklkksi lqyamqgklv eqdpndesve vllekiraek qklfeegkik
       61 kkdldisivs qgddnsyygn kdetssypiy eipeawryik faslvnfrig ktpprseatf
      121 wgteipwvsi sdmpisgyvt ntresiskla lkskkidisp kgtllmsfkl sigkvaildi
      181 pathneaiis ifpyankeni irdylmiflp listlgdskd aikgktlnst sisellipis
      241 nheemkriis kvdllfqkvs qlfe
//
LOCUS       WP_235887197             389 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Mycolicibacterium arabiense].
ACCESSION   WP_235887197
VERSION     WP_235887197.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium arabiense (Mycobacterium arabiense)
  ORGANISM  Mycolicibacterium arabiense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 389)
  AUTHORS   Todone,F., Vanoni,M.A., Mozzarelli,A., Bolognesi,M., Coda,A.,
            Curti,B. and Mattevi,A.
  TITLE     Active site plasticity in D-amino acid oxidase: a crystallographic
            analysis
  JOURNAL   Biochemistry 36 (19), 5853-5860 (1997)
   PUBMED   9153426
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013434.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01266.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Mycolicibacterium arabiense"
                     /db_xref="taxon:1286181"
     Protein         1..389
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=41594
     Region          4..368
                     /region_name="soxA_mon"
                     /note="sarcosine oxidase, monomeric form; TIGR01377"
                     /db_xref="CDD:130444"
ORIGIN      
        1 mksivigaga wglptaaela srghdvrlvd rygvgnplss sygptrmwrl adpdpsrarl
       61 glralaamkr leertgatvh evrgllwrdp psnpalaatc aglgidhewv saadvgdrfp
      121 glrddgrdav wlpdggivla erslraqfer ftgaggrfgh arsvveieer pngltvtysd
      181 mtsedadvvv iaagpesstf lrmlgidvpl ypyleqvvhf gdrdsvahtd afpclfdgea
      241 edragriyam ptpglgykvg ldlpigdyqa gnpdrtpsta rtevlrqrie rdfaavpatv
      301 vdaqvccwtd tpdgqfilda lpsgivlgcg cigegfkysa lmgeiladfa egrpqdddvk
      361 acsvtrfegr alldrsgptp vgsltrgap
//
LOCUS       WP_235887205             373 aa            linear   BCT 02-MAR-2025
DEFINITION  SIS domain-containing protein [Mycolicibacterium arabiense].
ACCESSION   WP_235887205
VERSION     WP_235887205.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium arabiense (Mycobacterium arabiense)
  ORGANISM  Mycolicibacterium arabiense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 373)
  AUTHORS   Bateman,A.
  TITLE     The SIS domain: a phosphosugar-binding domain
  JOURNAL   Trends Biochem Sci 24 (3), 94-95 (1999)
   PUBMED   10203754
REFERENCE   2  (residues 1 to 373)
  AUTHORS   Teplyakov,A., Obmolova,G., Badet-Denisot,M.A., Badet,B. and
            Polikarpov,I.
  TITLE     Involvement of the C terminus in intramolecular nitrogen channeling
            in glucosamine 6-phosphate synthase: evidence from a 1.6 A crystal
            structure of the isomerase domain
  JOURNAL   Structure 6 (8), 1047-1055 (1998)
   PUBMED   9739095
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013539.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01380.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Mycolicibacterium arabiense"
                     /db_xref="taxon:1286181"
     Protein         1..373
                     /product="SIS domain-containing protein"
                     /GO_function="GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA]"
                     /GO_process="GO:1901135 - carbohydrate derivative
                     metabolic process [Evidence IEA]"
                     /calculated_mol_wt=39786
     Region          13..367
                     /region_name="agaS_fam"
                     /note="putative sugar isomerase, AgaS family; TIGR02815"
                     /db_xref="CDD:131862"
ORIGIN      
        1 mpdipaqhdg gatileieqq pdawrevarl ideratsfvg glvarpdlrv iltgagssaf
       61 aghivapalr hhlnrrvdai attsivsnph dhleretptl vvsfgrsgns pesvattrlv
      121 delvddawhl iltcdgsgel srthsdrdds lvvlmpertn dtgfamtssl tsmmlaalll
      181 lgpadhrsve alataaeams arrddirala rtkrnrfvyl gsgaleglar esalkllelt
      241 agevvsyfds slgfrhgpks vldadtlavv ylstdaytqq ydrdivteir gqlgddavva
      301 igpdgaadaa wtmpvaglgd slaavaylvf aqylalftsv ewgktpdnpf psgevnrvve
      361 gvtihplpte gra
//
LOCUS       WP_235887214             280 aa            linear   BCT 02-MAR-2025
DEFINITION  cutinase family protein [Mycolicibacterium arabiense].
ACCESSION   WP_235887214
VERSION     WP_235887214.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium arabiense (Mycobacterium arabiense)
  ORGANISM  Mycolicibacterium arabiense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 280)
  AUTHORS   Longhi,S., Czjzek,M., Lamzin,V., Nicolas,A. and Cambillau,C.
  TITLE     Atomic resolution (1.0 A) crystal structure of Fusarium solani
            cutinase: stereochemical analysis
  JOURNAL   J Mol Biol 268 (4), 779-799 (1997)
   PUBMED   9175860
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013265.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01083.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Mycolicibacterium arabiense"
                     /db_xref="taxon:1286181"
     Protein         1..280
                     /product="cutinase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=28010
     Region          34..253
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 mirrlgmavv vagvalggla tgtaaaapag pagcadfhwm gaagsgqrdg akltqnggmg
       61 dvvyqsyeql eselaasgyt mtaeavqypa apvpldggig gwlgfmdsvk vgtdataaqf
      121 eaftercpnt kvvlagysqg amvvhrnlyd laddphvaaa llvadgdrlp vdttipmgsa
      181 avapgighgv aqehsfladt ntsplppaig artisvcdvg dpvcdydpat seltatdlai
      241 htayapaesg ahawgaplyq lvmnaaaaps advslsaqgg
//
LOCUS       WP_235887258             241 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6766 family protein [Mycolicibacterium arabiense].
ACCESSION   WP_235887258
VERSION     WP_235887258.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium arabiense (Mycobacterium arabiense)
  ORGANISM  Mycolicibacterium arabiense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042831.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20554.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Mycolicibacterium arabiense"
                     /db_xref="taxon:1286181"
     Protein         1..241
                     /product="DUF6766 family protein"
                     /calculated_mol_wt=26235
     Region          13..>177
                     /region_name="DUF6766"
                     /note="Domain of unknown function (DUF6766); pfam20554"
                     /db_xref="CDD:466703"
ORIGIN      
        1 mvrqdtssan rrrsllhdng lllaclalfg affvgmilag tatyneeqre hgsteqvsii
       61 gylttgdfve atfenwesef lqmgmyvvlt aflyqrgsse skpidgaapq dedprkadvt
      121 datpwpvrrg glalsayevs lavaffvlff asmalhalgg srafnderlq hgqaaiscgg
      181 tsrrrssgss rcrtgrasss psprssrsrs scvsavrrsr srsqrhttrr apdsrrssar
      241 p
//
LOCUS       WP_235887272             450 aa            linear   BCT 02-MAR-2025
DEFINITION  heparinase II/III family protein [Mycolicibacterium arabiense].
ACCESSION   WP_235887272
VERSION     WP_235887272.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium arabiense (Mycobacterium arabiense)
  ORGANISM  Mycolicibacterium arabiense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 450)
  AUTHORS   Dong,W., Lu,W., McKeehan,W.L., Luo,Y. and Ye,S.
  TITLE     Structural basis of heparan sulfate-specific degradation by
            heparinase III
  JOURNAL   Protein Cell 3 (12), 950-961 (2012)
   PUBMED   23011846
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028199.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16889.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Mycolicibacterium arabiense"
                     /db_xref="taxon:1286181"
     Protein         1..450
                     /product="heparinase II/III family protein"
                     /calculated_mol_wt=48238
     Region          32..>289
                     /region_name="AlgLyase"
                     /note="Alginate Lyase A1-III; enzymatically depolymerizes
                     alginate, a complex copolymer of beta-D-mannuronate and
                     alpha-L-guluronate, by cleaving the beta-(1,4) glycosidic
                     bond; cl00179"
                     /db_xref="CDD:444729"
ORIGIN      
        1 msaaevgwrv grvaarrvha aglpvgrpas gysdgmrdaa ldafraarrr pvlldrsrar
       61 aladahprwa adlvdaaera arlevtyfgy ptvqvpapvd whfdpvsrtt wpttaasaid
      121 yrtaagdvkw iwelnrlqhl pllaqawlit gearfsaaaf dqiddwirqn ppgtgigwrn
      181 pfepglrais ialalqglrd spdltvdrfa ritdmlvata qycwsdrsrf ssannhlvge
      241 laglavvalv fpdlpgattw erravrelea eagrqilddg sgaeqavgyq vftaelllvv
      301 gallqvrdgq ipdgirrali rsghyltalv gdgdpaprig dddegfafrl dgsplrsvrd
      361 hlglvaavtg epvssrhgta swtsewfggl agsrvptgap stletvgdsh hapagglvvm
      421 srevgqpgdr waaseggvgs vvivevqpaw
//
LOCUS       WP_235887298             496 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase fold domain-containing protein
            [Mycolicibacterium arabiense].
ACCESSION   WP_235887298
VERSION     WP_235887298.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium arabiense (Mycobacterium arabiense)
  ORGANISM  Mycolicibacterium arabiense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 496)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019474.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07859.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Mycolicibacterium arabiense"
                     /db_xref="taxon:1286181"
     Protein         1..496
                     /product="alpha/beta hydrolase fold domain-containing
                     protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=51558
     Region          277..474
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 mgkrshvgrm gavavglgig aavaagwsap qasadadggt sassesssds ssessspaas
       61 kpdaankskd pasgpgakdd daaatdtded aeesattard rkpqpkdndd deqretvkpt
      121 dlepvttpep ehavpvsapt rpvdepsvst vpvltrrdtd rttvsppiep aapaltssap
      181 ptdlaaaalp ptdqrlytgt pslvsqvvtl glrvvdvvlr pfggilafts ldipiftdgv
      241 ppfflthglh vqrsdfegtp vwtlrpasst ekviiglhgg ayvaeaslfh wwtytdmard
      301 tgatvvvply pllpegkaae vvpdtadfis amisqhgaen vsvigdsagg glalaatqel
      361 vrrgspvpsr mvllapwlda tvsdprsaai dgddplldvp slqgdgrewa gslgadhpya
      421 splngsldgl ppttvfsgsl dlltpdslrl rqrtideglt nfsfefrngm ihdwpifafl
      481 pdaigvrpai nrallg
//
LOCUS       WP_235887308             400 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent monooxygenase [Mycolicibacterium arabiense].
ACCESSION   WP_235887308
VERSION     WP_235887308.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium arabiense (Mycobacterium arabiense)
  ORGANISM  Mycolicibacterium arabiense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 400)
  AUTHORS   Schreuder,H.A., van der Laan,J.M., Swarte,M.B., Kalk,K.H., Hol,W.G.
            and Drenth,J.
  TITLE     Crystal structure of the reduced form of p-hydroxybenzoate
            hydroxylase refined at 2.3 A resolution
  JOURNAL   Proteins 14 (2), 178-190 (1992)
   PUBMED   1409567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01494.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Mycolicibacterium arabiense"
                     /db_xref="taxon:1286181"
     Protein         1..400
                     /product="FAD-dependent monooxygenase"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /calculated_mol_wt=43583
     Region          7..397
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mtrhavisga giagpalahe laergwrttv ierfperrde gqnvdirgaa rdvvrrmgid
       61 ddvrkagtge igmrfldedg vpkasfplga pgesdgptae leilrgelsr ilidhtrart
      121 dyrfnteiad vtdhgdrvtv dlsdataida dfvviaeglr srsrryvtta dvndlgmyfa
      181 yvtiprgped dqwwnwqhap gsravhtrpd nlgttrallt fisdvrglet laladqvtil
      241 qrtfadvgga aqrilaeldn gaplyfssvg qvstttwskg riallgdsaf cnatfggvgt
      301 smaligayvl agelsrendv haaltryerf mrseivdftp piqmkalrra npqtrtgirl
      361 lhngaramts pagkavmnvf gkrfsrvsvd gvqlpdyptd
//
LOCUS       WP_235887324             277 aa            linear   BCT 02-MAR-2025
DEFINITION  glycine betaine ABC transporter substrate-binding protein
            [Mycolicibacterium arabiense].
ACCESSION   WP_235887324
VERSION     WP_235887324.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium arabiense (Mycobacterium arabiense)
  ORGANISM  Mycolicibacterium arabiense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 277)
  AUTHORS   Fraser,K.R., Harvie,D., Coote,P.J. and O'Byrne,C.P.
  TITLE     Identification and characterization of an ATP binding cassette
            L-carnitine transporter in Listeria monocytogenes
  JOURNAL   Appl Environ Microbiol 66 (11), 4696-4704 (2000)
   PUBMED   11055912
REFERENCE   2  (residues 1 to 277)
  AUTHORS   Kappes,R.M., Kempf,B., Kneip,S., Boch,J., Gade,J., Meier-Wagner,J.
            and Bremer,E.
  TITLE     Two evolutionarily closely related ABC transporters mediate the
            uptake of choline for synthesis of the osmoprotectant glycine
            betaine in Bacillus subtilis
  JOURNAL   Mol Microbiol 32 (1), 203-216 (1999)
   PUBMED   10216873
REFERENCE   3  (residues 1 to 277)
  AUTHORS   Kempf,B. and Bremer,E.
  TITLE     OpuA, an osmotically regulated binding protein-dependent transport
            system for the osmoprotectant glycine betaine in Bacillus subtilis
  JOURNAL   J Biol Chem 270 (28), 16701-16713 (1995)
   PUBMED   7622480
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015995.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04069.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Mycolicibacterium arabiense"
                     /db_xref="taxon:1286181"
     Protein         1..277
                     /product="glycine betaine ABC transporter
                     substrate-binding protein"
                     /GO_component="GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=28686
     Region          60..271
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mtrrlvvalv alliagcsgg sappsiavga tddpqsalla qlyaaalryy gspahvetsd
       61 dpvgdldtrd vlvapgltgr lltrfdpnst arapeqvyra migalpegia agdyaqsadd
      121 gpavavteqt aeawggsdvt alartcgrpn agavvgavtp ravgscrlpe prefrdqtal
      181 faalqsgrid lawtstaaad vpdwavvltd rtsliraenv vplyrrnelt eqqvlalnqi
      241 ageldngala dmlrqvgdgk dpaalagdwl sshplgh
//
LOCUS       WP_235887142             249 aa            linear   BCT 02-MAR-2025
DEFINITION  type II restriction endonuclease [Mycolicibacterium arabiense].
ACCESSION   WP_235887142
VERSION     WP_235887142.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium arabiense (Mycobacterium arabiense)
  ORGANISM  Mycolicibacterium arabiense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 249)
  AUTHORS   Steczkiewicz,K., Muszewska,A., Knizewski,L., Rychlewski,L. and
            Ginalski,K.
  TITLE     Sequence, structure and functional diversity of PD-(D/E)XK
            phosphodiesterase superfamily
  JOURNAL   Nucleic Acids Res 40 (15), 7016-7045 (2012)
   PUBMED   22638584
REFERENCE   2  (residues 1 to 249)
  AUTHORS   Horton,N.C. and Perona,J.J.
  TITLE     DNA cleavage by EcoRV endonuclease: two metal ions in three metal
            ion binding sites
  JOURNAL   Biochemistry 43 (22), 6841-6857 (2004)
   PUBMED   15170321
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09233.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Mycolicibacterium arabiense"
                     /db_xref="taxon:1286181"
     Protein         1..249
                     /product="type II restriction endonuclease"
                     /calculated_mol_wt=27555
     Region          <90..232
                     /region_name="PDDEXK_nuclease-like"
                     /note="PDDEXK family nucleases; cl40440"
                     /db_xref="CDD:477358"
ORIGIN      
        1 meqwlreqca dygwglggvf rsrgdhawpv iahgpedlee qltagghilp lpkepaalan
       61 vlevgivsfl mdraedvpga taargtergy pdvefggdaf gggfhavdik varravgarg
      121 nplgrtqsri tlytgntyfr hprisfpgvm rpfadyashl dvlgiytlde tgpgrvadle
      181 livqqpwria srhrssttre yigavdried lragrgefdt esefyafwrk fpfktarave
      241 lllakeldr
//
LOCUS       WP_235887444             920 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Mycolicibacterium arabiense].
ACCESSION   WP_235887444
VERSION     WP_235887444.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium arabiense (Mycobacterium arabiense)
  ORGANISM  Mycolicibacterium arabiense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13191.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Mycolicibacterium arabiense"
                     /db_xref="taxon:1286181"
     Protein         1..920
                     /product="AAA family ATPase"
                     /calculated_mol_wt=98202
     Region          <16..916
                     /region_name="COG3899"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443106"
ORIGIN      
        1 mpggtvirte dshavdalla aasvgpcalv iggepgigkt tlwaeavela rakghrvlta
       61 rsgeaesvla yaavadllad vedrvldqlp elqrlavdrv llradgdgpp tdqrvtaaal
      121 vsivwtlaas spvlvaidda qwldsssqsv ldlamrkmtw rvgvvltert psddavaapw
      181 ltmsvpgavr rirvrpmspa alqtmiqarf grapsrstll riseasrgnp ffalelarav
      241 dgqsiggepv lpgtladlmq lrtghfgeav rdmllaaacv adptvgllae atgsttqrvl
      301 elldqpgreg ivvvdddrvr fthpllargi ytqagparrr rmhralaave sqpelrarhm
      361 algaasadse tlraldtaad sasargavaa aaelmelait lggdtftrrl raatyalqsg
      421 dahrsrallk pvaaampsga qrasarlvla dtwlydnsfv eavdlltsae adaaaapell
      481 vqtylrstlv htmtgrfaeg lryadlavae aerlavpall sqaltarvsv atgvglgrde
      541 aalqralele dpeadvpvaf raraadavtl awlgrleear tkllamrrqc idrgsdadlv
      601 hvsrhlvmad vwlarygaae vvaddmvrra eqlgsdhaia qgraqramvw ayqgregpar
      661 nesdaaieaa krcgvpslar gprftlgfle vsrgaydeal vvlepllaaf tpgqgteivs
      721 swhlpdavea mvnlgrleda eplvvalern gaeldrpwml avgarcraml qaargdleaa
      781 easvaramta hdrlpmpfer arttlfagql arrrrrkqva sqtltsamra fgaigtplwe
      841 erartelarv tvtrgrassl tpseasvarl aaagrsnrdi aaalfitpkt vehnltrvyr
      901 klgirarael arhadafgdd
//
LOCUS       WP_235887456             390 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Mycolicibacterium
            arabiense].
ACCESSION   WP_235887456
VERSION     WP_235887456.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium arabiense (Mycobacterium arabiense)
  ORGANISM  Mycolicibacterium arabiense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 390)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 390)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Mycolicibacterium arabiense"
                     /db_xref="taxon:1286181"
     Protein         1..390
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=40956
     Region          171..380
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(178,211,238,360,363)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(178,360,363)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(178,211,238)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
ORIGIN      
        1 mttgiedrpi tadlcrglae lertergwlp hrlpararaq stdpqlaaae aqpsgvrlaf
       61 rtratvvele llrtrtvlag vperpdgtvd ltiggrlvaq sgtsggdvvr vdtttgqaef
      121 ergapatvrf dglsgrdeel eiwlpfhert eivalrtdap vtplpvgrrr vwlhhgssis
      181 qgsnaaspst twpavaaalg gvevtnlgla gsamldpfta rtmrdtpada isvkiginlv
      241 nadvmraraf gpavhgfldt irdghpdapl lvvgplycpi hedtpgpgaf dpsalgrgav
      301 rfvatgdpaa asrgsltlsv irdqlgdlva armaedpnlh yldghdlygp ndsadhplpd
      361 alhpdaathl ligerfaqva fapggplagp
//
LOCUS       WP_235887474             759 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 C-terminal domain-containing protein
            [Mycolicibacterium arabiense].
ACCESSION   WP_235887474
VERSION     WP_235887474.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium arabiense (Mycobacterium arabiense)
  ORGANISM  Mycolicibacterium arabiense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 759)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014026.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01915.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Mycolicibacterium arabiense"
                     /db_xref="taxon:1286181"
     Protein         1..759
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=79405
     Region          18..736
                     /region_name="alph_arabinopyran"
                     /note="exo-alpha-(1->6)-L-arabinopyranosidase; NF041610"
                     /db_xref="CDD:469494"
ORIGIN      
        1 mtkgsehrtr asedavgelt peqkaalggg asfwrtkava gvsavamsdg phgvrfqaea
       61 gdhlglggsv patcfppavg laqswdpela rrvgaalade aqavglgvll gpginikrdp
      121 rcgrnfeyfs edpylsgrla iewvrglqsg gvgaslkhfa vnnqehdrmr tsaevdqrtl
      181 reiylrafer vvrdaepwtv mcsynringv yasqnrwllt dvlrdtwgfd glvvsdwgav
      241 adrvaavaag ldlqmpgdta addaavvtaa sdgrldasav draaravarl sarvdagrrd
      301 vtvdadahha lareaagrsi vllknendll pldtrrsvav igafaedpry qgggsshvtp
      361 trvdspleei raavdgevtf argfdtggma dagalraeav rtaaaadvav vfaglaasqe
      421 segfdrddid vpgdqlalle evvaaqsntv vvvsaggvlr lapvhasara ilggallgqa
      481 gggaiadvlt gavnpsgrva etfplrleda psyphfpgeh srvrygegif vgyrgydvrg
      541 qdvlypfghg lsytsfgydg ldlavdgegi larvtvtntg eragrevvql yasvatstvs
      601 raprelvgfg svdlepgast visvrierrd laywddrlnr wvveggtyri eagassrdlr
      661 lgedvemdgd dgrlpftles tlgelmsdpv gaqalgeafa sfapagdggg ealgvdmlrm
      721 aasipigrmv rgfgagsgvg aaevqallds inarnsagd
//
LOCUS       WP_235887506             286 aa            linear   BCT 02-MAR-2025
DEFINITION  pseudouridine synthase [Mycolicibacterium arabiense].
ACCESSION   WP_235887506
VERSION     WP_235887506.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium arabiense (Mycobacterium arabiense)
  ORGANISM  Mycolicibacterium arabiense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 286)
  AUTHORS   Wrzesinski,J., Nurse,K., Bakin,A., Lane,B.G. and Ofengand,J.
  TITLE     A dual-specificity pseudouridine synthase: an Escherichia coli
            synthase purified and cloned on the basis of its specificity for
            psi 746 in 23S RNA is also specific for psi 32 in tRNA(phe)
  JOURNAL   RNA 1 (4), 437-448 (1995)
   PUBMED   7493321
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013045.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00849.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Mycolicibacterium arabiense"
                     /db_xref="taxon:1286181"
     Protein         1..286
                     /product="pseudouridine synthase"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /GO_process="GO:0001522 - pseudouridine synthesis
                     [Evidence IEA]"
                     /GO_process="GO:0009451 - RNA modification [Evidence IEA]"
                     /calculated_mol_wt=31636
     Region          45..286
                     /region_name="PseudoU_synth"
                     /note="Pseudouridine synthases catalyze the isomerization
                     of specific uridines in an RNA molecule to pseudouridines
                     (5-ribosyluracil, psi); cl00130"
                     /db_xref="CDD:469624"
     Site            order(131..134,229)
                     /site_type="active"
                     /db_xref="CDD:211332"
ORIGIN      
        1 msrgrikapl pvrdglgpar vrvqggslve eferrfasga kvlagevfsa sgepldgttv
       61 lpagahvyly relpdevevp fempilhrdd dvvvvdkphf latmprgahv aqtalvrlrr
      121 slglpelspa hrldrltagv llftarrevr gayqtmfarg evgktylara gvddsltfpl
      181 tlrnrimker srlqafeapg epnaetlveh lgdgryrltp rtgrthqlrv hmaslglpiv
      241 ndplypdvve vpgddftrpl qlvareltfd dpitgerrrf vsartl
//
LOCUS       WP_235887109             109 aa            linear   BCT 02-MAR-2025
DEFINITION  EsaB/YukD family protein [Mycolicibacterium arabiense].
ACCESSION   WP_235887109
VERSION     WP_235887109.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium arabiense (Mycobacterium arabiense)
  ORGANISM  Mycolicibacterium arabiense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 109)
  AUTHORS   Burroughs,A.M., Iyer,L.M. and Aravind,L.
  TITLE     Functional diversification of the RING finger and other binuclear
            treble clef domains in prokaryotes and the early evolution of the
            ubiquitin system
  JOURNAL   Mol Biosyst 7 (7), 2261-2277 (2011)
   PUBMED   21547297
REFERENCE   2  (residues 1 to 109)
  AUTHORS   Sutcliffe,I.C.
  TITLE     New insights into the distribution of WXG100 protein secretion
            systems
  JOURNAL   Antonie Van Leeuwenhoek 99 (2), 127-131 (2011)
   PUBMED   20852931
REFERENCE   3  (residues 1 to 109)
  AUTHORS   Desvaux,M., Hebraud,M., Talon,R. and Henderson,I.R.
  TITLE     Outer membrane translocation: numerical protein secretion
            nomenclature in question in mycobacteria
  JOURNAL   Trends Microbiol 17 (8), 338-340 (2009)
   PUBMED   19674902
REFERENCE   4  (residues 1 to 109)
  AUTHORS   Desvaux,M., Hebraud,M., Talon,R. and Henderson,I.R.
  TITLE     Secretion and subcellular localizations of bacterial proteins: a
            semantic awareness issue
  JOURNAL   Trends Microbiol 17 (4), 139-145 (2009)
   PUBMED   19299134
REFERENCE   5  (residues 1 to 109)
  AUTHORS   Iyer,L.M., Burroughs,A.M. and Aravind,L.
  TITLE     The prokaryotic antecedents of the ubiquitin-signaling system and
            the early evolution of ubiquitin-like beta-grasp domains
  JOURNAL   Genome Biol 7 (7), R60 (2006)
   PUBMED   16859499
REFERENCE   6  (residues 1 to 109)
  AUTHORS   van den Ent,F. and Lowe,J.
  TITLE     Crystal structure of the ubiquitin-like protein YukD from Bacillus
            subtilis
  JOURNAL   FEBS Lett 579 (17), 3837-3841 (2005)
   PUBMED   15978580
REFERENCE   7  (residues 1 to 109)
  AUTHORS   Burts,M.L., Williams,W.A., DeBord,K. and Missiakas,D.M.
  TITLE     EsxA and EsxB are secreted by an ESAT-6-like system that is
            required for the pathogenesis of Staphylococcus aureus infections
  JOURNAL   Proc Natl Acad Sci U S A 102 (4), 1169-1174 (2005)
   PUBMED   15657139
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020396.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08817.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Mycolicibacterium arabiense"
                     /db_xref="taxon:1286181"
     Protein         1..109
                     /product="EsaB/YukD family protein"
                     /calculated_mol_wt=11797
     Region          10..>103
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
ORIGIN      
        1 mallvgedfe idyslpagva liavtedlva rvnevlrerg rtmldpersy rlcradaqpl
       61 dpqktldecg vldgeqlwll paasaetyep vtemvstaia raanqllap
//
LOCUS       WP_235887532             392 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Mycolicibacterium arabiense].
ACCESSION   WP_235887532
VERSION     WP_235887532.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium arabiense (Mycobacterium arabiense)
  ORGANISM  Mycolicibacterium arabiense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Mycolicibacterium arabiense"
                     /db_xref="taxon:1286181"
     Protein         1..392
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=40998
     Region          24..382
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mtalsygrds sgivvtqgrs aplrfgvlas htptmcgvan fsgalcdalq atgasvevvr
       61 vadgqhsvaa rvvaeltggs tdsiaecaav lnqcdvaiih hdvgvyggde gsdlvavmrl
      121 levptivvah avprhpshqq rtvfeevlhr adrivvvsda vgdrlrahyd vwrgrvktip
      181 hgvtlaptvs akrsgrptll twgllrpgkg iervidamat lrevrgqpky viagkthprt
      241 latdgesyrt alsdqverag lgtsvgfepd yrgpgtlaal vqscaavvlp ydatdqvtsg
      301 vlvqavasgr pvvatafpha idvlgsgagi lvahddtegl taalrsvltd prlsgamaae
      361 grrlapsmaw svvaeeyatl atklvrekrt ha
//
LOCUS       WP_235887535             512 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Mycolicibacterium arabiense].
ACCESSION   WP_235887535
VERSION     WP_235887535.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium arabiense (Mycobacterium arabiense)
  ORGANISM  Mycolicibacterium arabiense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 512)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 512)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Mycolicibacterium arabiense"
                     /db_xref="taxon:1286181"
     Protein         1..512
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=57055
     Region          18..149
                     /region_name="PIN_SF"
                     /note="PIN (PilT N terminus) domain: Superfamily; cl28905"
                     /db_xref="CDD:475124"
ORIGIN      
        1 maggaddvsd assvirflld tnafialepf aghmepgigp aatfmrlamk qrhqvfvhpa
       61 sgdelaegkv enrvrqrmae lrefemlaes hihsdintel gpveddtndh rdrrilasly
      121 snsvtflvsd dgrlgkrakr igigarvvtl adavamlegy eptalpppph viklptyaln
      181 ledaifdtir ddyadfdswi kkvqsdsenr ecfvvleddg ryaaiailki yenpcgyglt
      241 rpvtkistfk vaqpfsgnry gelllkavlq shhdhkagsa yveawdkhqp lvdflgnfgy
      301 fecgrsqrge rvlakayepr desvgaleyh vrygppavsl nasafvirik nhwhnqlfpe
      361 camssavekg qlafpdfage qirpwgnvlr kaylcnastn rlepgdiilf yrsgfktvev
      421 igvveetlrt gsaedvtnmv ggrtvysadd verlashsrq vlvimfrrdw vlddpwtlpe
      481 lqfssvlnvp pqavqqvgea gkqwihrqla ar
//
LOCUS       WP_235887550             179 aa            linear   BCT 02-MAR-2025
DEFINITION  hemerythrin domain-containing protein [Mycolicibacterium
            arabiense].
ACCESSION   WP_235887550
VERSION     WP_235887550.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium arabiense (Mycobacterium arabiense)
  ORGANISM  Mycolicibacterium arabiense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 179)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
REFERENCE   2  (residues 1 to 179)
  AUTHORS   Throup,J.P., Zappacosta,F., Lunsford,R.D., Annan,R.S., Carr,S.A.,
            Lonsdale,J.T., Bryant,A.P., McDevitt,D., Rosenberg,M. and
            Burnham,M.K.
  TITLE     The srhSR gene pair from Staphylococcus aureus: genomic and
            proteomic approaches to the identification and characterization of
            gene function
  JOURNAL   Biochemistry 40 (34), 10392-10401 (2001)
   PUBMED   11513618
REFERENCE   3  (residues 1 to 179)
  AUTHORS   Martins,L.J., Hill,C.P. and Ellis,W.R. Jr.
  TITLE     Structures of wild-type chloromet and L103N hydroxomet Themiste
            zostericola myohemerythrins at 1.8 A resolution
  JOURNAL   Biochemistry 36 (23), 7044-7049 (1997)
   PUBMED   9188702
REFERENCE   4  (residues 1 to 179)
  AUTHORS   Stenkamp,R.E., Sieker,L.C., Jensen,L.H. and McQueen,J.E. Jr.
  TITLE     Structure of methemerythrin at 2.8-Angstrom resolution: computer
            graphics fit of an averaged electron density map
  JOURNAL   Biochemistry 17 (13), 2499-2504 (1978)
   PUBMED   678527
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013936.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01814.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Mycolicibacterium arabiense"
                     /db_xref="taxon:1286181"
     Protein         1..179
                     /product="hemerythrin domain-containing protein"
                     /calculated_mol_wt=19590
     Region          9..>86
                     /region_name="Hemerythrin-like"
                     /note="Hemerythrin family; cl15774"
                     /db_xref="CDD:449588"
ORIGIN      
        1 msedvvsylk qqheairalf ietldastte qqqafdrlrt llavhetaee mmvhprvrrk
       61 vdggaavada rlaeehdske alarlenipc gtaefskeli hlqaavlaha epeeaeeftl
      121 letelddeer rklasavqaa eriapthphp gvesgfanfa vgpfasmldr ardalrgaa
//
LOCUS       WP_235887372             228 aa            linear   BCT 02-MAR-2025
DEFINITION  ribonuclease T2 family protein [Mycolicibacterium arabiense].
ACCESSION   WP_235887372
VERSION     WP_235887372.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium arabiense (Mycobacterium arabiense)
  ORGANISM  Mycolicibacterium arabiense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 228)
  AUTHORS   Kurihara,H., Nonaka,T., Mitsui,Y., Ohgi,K., Irie,M. and
            Nakamura,K.T.
  TITLE     The crystal structure of ribonuclease Rh from Rhizopus niveus at
            2.0 A resolution
  JOURNAL   J Mol Biol 255 (2), 310-320 (1996)
   PUBMED   8551522
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012659.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00445.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Mycolicibacterium arabiense"
                     /db_xref="taxon:1286181"
     Protein         1..228
                     /product="ribonuclease T2 family protein"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0033897 - ribonuclease T2 activity
                     [Evidence IEA]"
                     /calculated_mol_wt=24278
     Region          20..194
                     /region_name="RnaI"
                     /note="Ribonuclease I [Translation, ribosomal structure
                     and biogenesis]; COG3719"
                     /db_xref="CDD:442933"
ORIGIN      
        1 mfdgnrstlv sdsssdsswl vltwspsfck aqpadpecrs gelvgmertl ilhglwpqpr
       61 dnqycgvsrr leevaskgrg dlppielsdg vraglqstma nsshlslhew yahgtcsgvt
      121 pdayfgdava ltarvretld plfrdadggq lpvsavrarm derfgpgage rvglsclnak
      181 gegayvvdvr lslpsvaalr tidesldlgt llneappits ecahglvp
//
LOCUS       WP_235887562             171 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Mycolicibacterium arabiense].
ACCESSION   WP_235887562
VERSION     WP_235887562.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium arabiense (Mycobacterium arabiense)
  ORGANISM  Mycolicibacterium arabiense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 171)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 171)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Mycolicibacterium arabiense"
                     /db_xref="taxon:1286181"
     Protein         1..171
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=18947
     Region          12..165
                     /region_name="PhnO"
                     /note="N-acetyltransferase, GNAT superfamily (includes
                     histone acetyltransferase HPA2) [Transcription, General
                     function prediction only]; COG0454"
                     /db_xref="CDD:440222"
ORIGIN      
        1 mrletvvmsn ptfvpvsqdd plaepllael ayeyatrygs tiervgnwlr gypaaefaap
       61 dgamvighvd gvpvtggafr rfddrtaelk riwtdsrhrr rgharallav leadiaargy
      121 rriylttgdk qpeaealyla tgyrrlaepl eeqgegypva flkdlpdggr r
//
LOCUS       WP_235887646             755 aa            linear   BCT 02-MAR-2025
DEFINITION  transketolase-like TK C-terminal-containing protein
            [Mycolicibacterium arabiense].
ACCESSION   WP_235887646
VERSION     WP_235887646.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium arabiense (Mycobacterium arabiense)
  ORGANISM  Mycolicibacterium arabiense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 755)
  AUTHORS   Veitch,N.J., Maugeri,D.A., Cazzulo,J.J., Lindqvist,Y. and
            Barrett,M.P.
  TITLE     Transketolase from Leishmania mexicana has a dual subcellular
            localization
  JOURNAL   Biochem J 382 (Pt 2), 759-767 (2004)
   PUBMED   15149284
REFERENCE   2  (residues 1 to 755)
  AUTHORS   Gerhardt,S., Echt,S., Busch,M., Freigang,J., Auerbach,G., Bader,G.,
            Martin,W.F., Bacher,A., Huber,R. and Fischer,M.
  TITLE     Structure and properties of an engineered transketolase from maize
  JOURNAL   Plant Physiol 132 (4), 1941-1949 (2003)
   PUBMED   12913150
REFERENCE   3  (residues 1 to 755)
  AUTHORS   Arjunan,P., Nemeria,N., Brunskill,A., Chandrasekhar,K., Sax,M.,
            Yan,Y., Jordan,F., Guest,J.R. and Furey,W.
  TITLE     Structure of the pyruvate dehydrogenase multienzyme complex E1
            component from Escherichia coli at 1.85 A resolution
  JOURNAL   Biochemistry 41 (16), 5213-5221 (2002)
   PUBMED   11955070
REFERENCE   4  (residues 1 to 755)
  AUTHORS   Fiedler,E., Thorell,S., Sandalova,T., Golbik,R., Konig,S. and
            Schneider,G.
  TITLE     Snapshot of a key intermediate in enzymatic thiamin catalysis:
            crystal structure of the alpha-carbanion of
            (alpha,beta-dihydroxyethyl)-thiamin diphosphate in the active site
            of transketolase from Saccharomyces cerevisiae
  JOURNAL   Proc Natl Acad Sci U S A 99 (2), 591-595 (2002)
   PUBMED   11773632
REFERENCE   5  (residues 1 to 755)
  AUTHORS   Wikner,C., Nilsson,U., Meshalkina,L., Udekwu,C., Lindqvist,Y. and
            Schneider,G.
  TITLE     Identification of catalytically important residues in yeast
            transketolase
  JOURNAL   Biochemistry 36 (50), 15643-15649 (1997)
   PUBMED   9398292
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046326.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22613.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Mycolicibacterium arabiense"
                     /db_xref="taxon:1286181"
     Protein         1..755
                     /product="transketolase-like TK C-terminal-containing
                     protein"
                     /calculated_mol_wt=81871
     Region          2..752
                     /region_name="PRK13012"
                     /note="2-oxoacid dehydrogenase subunit E1; Provisional"
                     /db_xref="CDD:237267"
     Region          2..355
                     /region_name="TPP_enzymes"
                     /note="Thiamine pyrophosphate (TPP) enzyme family,
                     TPP-binding module; found in many key metabolic enzymes
                     which use TPP (also known as thiamine diphosphate) as a
                     cofactor. These enzymes include, among others, the E1
                     components of the pyruvate, the acetoin and...; cl01629"
                     /db_xref="CDD:470272"
     Site            order(111,145..148,176,178)
                     /site_type="other"
                     /note="TPP-binding site [chemical binding]"
                     /db_xref="CDD:238318"
ORIGIN      
        1 miasrvlwls aamvhhanri rvnpsgmkvg ghqassasmv gimtslyfdq lqagdrvsvk
       61 phaspvlhgi nyllgylder ymttlrefgg lqsypsrtkd pdpvdystgs vgigatapiw
      121 asfarryvdt afgrtgagrq yslvgdaeld egavweavmd ptvqelgevv wivdmnrqsl
      181 drvvphiasg rlqdmfaaag wqvltvkfgk vleelftrpg gdalrtrivt mpnpeyqrll
      241 rcsaedlrsr lpgdgedadg vaaviadldd atllqaignl gghdiatlqe aygqiddtrp
      301 tvilaytikg yglptqghpq nhsslltdeq fvqlaetlge dpqqpfqrfd pqsppgrlcl
      361 qvaerlrrdd vrlsepprvp tdigrtppav sntqsalgrt lldlsrdapd vakrvvtvsp
      421 dvssstnlag wlnkvgvwsp serpdwfadd rdtlmhwreh ptgqhmelgi aevnlvgllg
      481 elgatwsrwg qplfpigvly dpfveralep wsfgiyaggq silvgtpsgv tlsaeggahq
      541 siktpsigle qpgcisyepa faaevewill hcisrlgrpd gtssylrlst rpvrqelarv
      601 psdaaarerr rrhvlagayt lqsatkpavc ivamgalvte avlaadrlad mgveaevvcv
      661 tspdllyrav qsrdglaeap swiidqvfpa draapmvtvl dghphtltfl atvnrvrcks
      721 lgvnafgqvg dldsvyrhhg idtdgivraa ldvcs
//
LOCUS       WP_235887525             208 aa            linear   BCT 02-MAR-2025
DEFINITION  undecaprenyl diphosphate synthase family protein [Mycolicibacterium
            arabiense].
ACCESSION   WP_235887525
VERSION     WP_235887525.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium arabiense (Mycobacterium arabiense)
  ORGANISM  Mycolicibacterium arabiense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 208)
  AUTHORS   Shimizu,N., Koyama,T. and Ogura,K.
  TITLE     Molecular cloning, expression, and purification of undecaprenyl
            diphosphate synthase. No sequence similarity between E- and
            Z-prenyl diphosphate synthases
  JOURNAL   J Biol Chem 273 (31), 19476-19481 (1998)
   PUBMED   9677368
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013424.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01255.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Mycolicibacterium arabiense"
                     /db_xref="taxon:1286181"
     Protein         1..208
                     /product="undecaprenyl diphosphate synthase family
                     protein"
                     /GO_function="GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /calculated_mol_wt=22844
     Region          2..201
                     /region_name="Prenyltransf"
                     /note="Putative undecaprenyl diphosphate synthase;
                     pfam01255"
                     /db_xref="CDD:460138"
ORIGIN      
        1 mipdglrrwa qtrgtslsea ylrgaekvve illalqrndv atvsvynlsr anlgrrddel
       61 davysaslhf lntlvpqhfd gsacsvrlhg drtalpaeyv aaaehveaam tgedfrinvl
      121 aaydaadelr aaqrraerdg cdisaafeig avdlvirttp epllsgflpf qsqyaqlifl
      181 ttplndltgs riddivadyr rlpqlrgr
//
LOCUS       WP_235887738             156 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease subunit S, partial [Streptococcus
            pneumoniae].
ACCESSION   WP_235887738
VERSION     WP_235887738.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Janscak,P. and Bickle,T.A.
  TITLE     The DNA recognition subunit of the type IB restriction-modification
            enzyme EcoAI tolerates circular permutions of its polypeptide chain
  JOURNAL   J Mol Biol 284 (4), 937-948 (1998)
   PUBMED   9837717
REFERENCE   2  (residues 1 to 156)
  AUTHORS   Bickle,T.A. and Kruger,D.H.
  TITLE     Biology of DNA restriction
  JOURNAL   Microbiol Rev 57 (2), 434-450 (1993)
   PUBMED   8336674
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01420.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..156
                     /product="restriction endonuclease subunit S"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
     Region          34..>148
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
ORIGIN      
        1 klfeegkikk kdldisivsq gddnsyygni pmnwvvikik difsmntgls ykkgdlsinn
       61 kgvriirggn ikplefslld ndyyidtqfi sseqvylkhn qlitpvstsl ehigkfarid
      121 kdydgvvagg fifqltpfes seiiskfllf tpiihp
//
LOCUS       WP_235887747             106 aa            linear   BCT 02-MAR-2025
DEFINITION  PTS system mannose/fructose/sorbose family transporter subunit IID,
            partial [Streptococcus pneumoniae].
ACCESSION   WP_235887747
VERSION     WP_235887747.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015570.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03613.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..>106
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
     Region          1..>106
                     /region_name="ManZ"
                     /note="Phosphotransferase system,
                     mannose/fructose/N-acetylgalactosamine-specific IID
                     component [Carbohydrate transport and metabolism];
                     COG3716"
                     /db_xref="CDD:442930"
ORIGIN      
        1 gyanvmypal kkhygedqeg fyqaleence fyntnphflp fitslhlvml engrpaketr
       61 sikmalmgpl agigdslsqf claplfstia asfaqeglvv gpilff
//
LOCUS       WP_235887742             146 aa            linear   BCT 02-MAR-2025
DEFINITION  PRD domain-containing protein, partial [Streptococcus pneumoniae].
ACCESSION   WP_235887742
VERSION     WP_235887742.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 146)
  AUTHORS   Graille,M., Zhou,C.Z., Receveur-Brechot,V., Collinet,B.,
            Declerck,N. and van Tilbeurgh,H.
  TITLE     Activation of the LicT transcriptional antiterminator involves a
            domain swing/lock mechanism provoking massive structural changes
  JOURNAL   J Biol Chem 280 (15), 14780-14789 (2005)
   PUBMED   15699035
REFERENCE   2  (residues 1 to 146)
  AUTHORS   Declerck,N., Dutartre,H., Receveur,V., Dubois,V., Royer,C.,
            Aymerich,S. and van Tilbeurgh,H.
  TITLE     Dimer stabilization upon activation of the transcriptional
            antiterminator LicT
  JOURNAL   J Mol Biol 314 (4), 671-681 (2001)
   PUBMED   11733988
REFERENCE   3  (residues 1 to 146)
  AUTHORS   van Tilbeurgh,H. and Declerck,N.
  TITLE     Structural insights into the regulation of bacterial signalling
            proteins containing PRDs
  JOURNAL   Curr Opin Struct Biol 11 (6), 685-693 (2001)
   PUBMED   11751049
REFERENCE   4  (residues 1 to 146)
  AUTHORS   van Tilbeurgh,H., Le Coq,D. and Declerck,N.
  TITLE     Crystal structure of an activated form of the PTS regulation domain
            from the LicT transcriptional antiterminator
  JOURNAL   EMBO J 20 (14), 3789-3799 (2001)
   PUBMED   11447120
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013070.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00874.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..>146
                     /product="PRD domain-containing protein"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
     Region          1..>146
                     /region_name="PRK09772"
                     /note="transcriptional antiterminator BglG; Provisional"
                     /db_xref="CDD:170086"
ORIGIN      
        1 ilnhnaviaq skkdidillf grgiafgrki gdkvnpidie ksfflknrdn mtrftemfin
       61 vplelvyite kiinlgkitl gnnfdeiiyi nltdhisssi erykegviis nplrweisky
      121 ykeefelgkr alqiikkelg ielpid
//
LOCUS       WP_235887775             731 aa            linear   BCT 02-MAR-2025
DEFINITION  tail fiber domain-containing protein, partial [Streptococcus
            pneumoniae].
ACCESSION   WP_235887775
VERSION     WP_235887775.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 731)
  AUTHORS   Schwarzer,D., Stummeyer,K., Gerardy-Schahn,R. and Muhlenhoff,M.
  TITLE     Characterization of a novel intramolecular chaperone domain
            conserved in endosialidases and other bacteriophage tail spike and
            fiber proteins
  JOURNAL   J Biol Chem 282 (5), 2821-2831 (2007)
   PUBMED   17158460
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025253.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13884.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..731
                     /product="tail fiber domain-containing protein"
     Region          <236..320
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; cl19911"
                     /db_xref="CDD:418717"
     Region          637..687
                     /region_name="Peptidase_S74"
                     /note="Chaperone of endosialidase; pfam13884"
                     /db_xref="CDD:404724"
ORIGIN      
        1 arqatavrel vnrdfvgkat yqedvkginq rieavktsan kdiasqiasy rqsvdgkftd
       61 issqittykq dvggqisgls nrltsseqgt ttqisnisnr insnkqgtdn qisnlktqva
      121 tnkdnaerqm grisdqvsan kanadsqfan vtnqlarkve ttdfqrvket sklyerilgn
      181 tengiadkva rmaltnqlfq vevaknasng qnllkgtkdf sggwknkgan wkkhaekykg
      241 vdvlfknnsw ngvgqeidak igevytfslw mksdwkndtv nfyvnrngsv ekgwgvpset
      301 svaitsewkr ysftfkitvd gfifprverl nqntnlyiag lklekgsyat pyteapedtd
      361 eairsvqsql tgswavqnin sagdiisgin lganghnrfv gklthitget lidraviksa
      421 mvdklktgnf eagsvtttil daeavtaekl kvddalikkl tandafidql iskrifstkv
      481 esvissstfl eayqgriggf tlgqfdqggg rwisgvnqfs vgmgngagyg vrtafwanwg
      541 nnwnyagpka wnvntdgkmy crnevgfydq vdfsnssran fygnttfsrs pvfsngielg
      601 skdvlgdgwn pkggrnavvw wnqvgsgsvk ywmeqksdrr lkenitdtav kaldkinrlr
      661 mvafdfienk kheeigliaq eaetivpriv srdpenpdgy lhidytalvp ylikaiqeln
      721 qkiekmekti a
//
LOCUS       WP_235887849             345 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase [Neobacillus paridis].
ACCESSION   WP_235887849
VERSION     WP_235887849.1
KEYWORDS    RefSeq.
SOURCE      Neobacillus paridis
  ORGANISM  Neobacillus paridis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Neobacillus.
REFERENCE   1  (residues 1 to 345)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 345)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Neobacillus paridis"
                     /db_xref="taxon:2803862"
     Protein         1..345
                     /product="phosphotransferase"
                     /calculated_mol_wt=40975
     Region          39..340
                     /region_name="CotI"
                     /note="Spore coat protein CotI/CotS, protein kinase
                     superfamily [Cell cycle control, cell division, chromosome
                     partitioning]; COG5881"
                     /db_xref="CDD:444583"
ORIGIN      
        1 mtqvlmecpk tmtkvvkpsk grygddayyn rlfsyfrsql kekikemvpl qrsvlllkte
       61 qhlyvvkgyq snqrlkiqea ftstlrkegf mntyvflqsp akeqlffegs yfglieyipq
      121 nkvaftfqtl knrrdgldll ekfhhatasf etryrrllpk adligkwter levfsnnlpf
      181 lmyfmnepfi seivswanws vkgmeanrey feeepfvilh gdvahhnflr nedgklyiid
      241 fdlisigprv ldylqyanri lpyldwsidk lgslkqmrkf lhdnsflyal ayptdifrew
      301 nrlireqsys dphklqqvmd lsigqfysrk kfisrlksmv nesgy
//
LOCUS       WP_235888009              39 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6254 family protein [Neobacillus].
ACCESSION   WP_235888009
VERSION     WP_235888009.1
KEYWORDS    RefSeq.
SOURCE      Neobacillus
  ORGANISM  Neobacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040037.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19767.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..39
                     /organism="Neobacillus"
                     /db_xref="taxon:2675232"
     Protein         1..39
                     /product="DUF6254 family protein"
                     /calculated_mol_wt=4379
     Region          1..36
                     /region_name="DUF6254"
                     /note="Family of unknown function (DUF6254); pfam19767"
                     /db_xref="CDD:437599"
ORIGIN      
        1 msqsksqqer qwtvrkqdqn phgkvkslkq laeetgkgk
//
LOCUS       WP_235888032             149 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: V4R domain-containing protein [Neobacillus].
ACCESSION   WP_235888032
VERSION     WP_235888032.1
KEYWORDS    RefSeq.
SOURCE      Neobacillus
  ORGANISM  Neobacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 149)
  AUTHORS   Anantharaman,V., Koonin,E.V. and Aravind,L.
  TITLE     Regulatory potential, phyletic distribution and evolution of
            ancient, intracellular small-molecule-binding domains
  JOURNAL   J Mol Biol 307 (5), 1271-1292 (2001)
   PUBMED   11292341
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02830.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Neobacillus"
                     /db_xref="taxon:2675232"
     Protein         1..149
                     /product="V4R domain-containing protein"
                     /calculated_mol_wt=16670
     Region          31..148
                     /region_name="COG1719"
                     /note="Predicted hydrocarbon binding protein, contains 4VR
                     domain [General function prediction only]"
                     /db_xref="CDD:441325"
ORIGIN      
        1 mdlftfedmk kinrkklgnq iplelfrsir ligmyqglpl ngknttatvg rkigqslsvn
       61 tiedalshfe elkigiptil esnekaylvr iddcfckglp vhpgnkvcdl egailegais
      121 rfyrgvetvr eekcnvngds hceyrikll
//
LOCUS       WP_235888194             104 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: tyrosine-type recombinase/integrase [Neobacillus].
ACCESSION   WP_235888194
VERSION     WP_235888194.1
KEYWORDS    RefSeq.
SOURCE      Neobacillus
  ORGANISM  Neobacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 104)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 104)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Neobacillus"
                     /db_xref="taxon:2675232"
     Protein         1..104
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=11726
     Region          <35..82
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(44,47,70,80)
                     /site_type="active"
                     /db_xref="CDD:271189"
ORIGIN      
        1 mptnlqqlaf yshaskykvi snttankllk klldrlninp itfhglrhsh aslllcegat
       61 iyyvserlgh sdidttikry thvlnelrak delttvkife amav
//
LOCUS       WP_235888321             458 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme [Neobacillus paridis].
ACCESSION   WP_235888321
VERSION     WP_235888321.1
KEYWORDS    RefSeq.
SOURCE      Neobacillus paridis
  ORGANISM  Neobacillus paridis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Neobacillus.
REFERENCE   1  (residues 1 to 458)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Neobacillus paridis"
                     /db_xref="taxon:2803862"
     Protein         1..458
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /calculated_mol_wt=50965
     Region          1..430
                     /region_name="PRK07064"
                     /note="thiamine pyrophosphate-binding protein"
                     /db_xref="CDD:180820"
ORIGIN      
        1 mhitgevdsn yigtdqryih eakdqlkmme gvnkaayllk rpkqitpymr qaikealsvp
       61 tgpvtiaipt nfqaqiipqn qlievetiqn qevkmdipdi iaemiseakr pivwagngvv
      121 asgateelqk lvdkiqpavv tsesgkgsip enyplcignf tftpqvekll ersdllisig
      181 vhfrgwetng wtspvpknhi nidlnshafn rsfdtlytln gdakkvlqai ndalvhkeik
      241 pdatyveevr svrlavrndl riqigpygei vdimreqlpe ntilvtdvti pgytwgnklf
      301 diyeprnyly mtgggigqgl pmaigakigq pnkpvvliag dggfmvnvge litaiqentp
      361 iivllfddgg ygilryyqea aygrrtsvdl knpdfvmlak smgfeservh sveefkkgle
      421 navrskkpym vvvdveavgv leykeseeyi esfrpqhg
//
LOCUS       WP_235888345              79 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase N-terminal domain-containing protein, partial
            [Streptococcus pneumoniae].
ACCESSION   WP_235888345
VERSION     WP_235888345.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025851.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14498.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..>79
                     /product="glycoside hydrolase N-terminal domain-containing
                     protein"
     Region          1..>79
                     /region_name="Glyco_hyd_65N_2"
                     /note="Glycosyl hydrolase family 65, N-terminal domain;
                     pfam14498"
                     /db_xref="CDD:405224"
ORIGIN      
        1 lggmiygsat keciqlndet iwyrgksdrn npdsllhlkk ireylldgei qkaeeliklt
       61 mfatprdqsh yellgelyi
//
LOCUS       WP_235888353              71 aa            linear   BCT 02-MAR-2025
DEFINITION  cysteine peptidase family C39 domain-containing protein, partial
            [Streptococcus pneumoniae].
ACCESSION   WP_235888353
VERSION     WP_235888353.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 71)
  AUTHORS   Havarstein,L.S., Diep,D.B. and Nes,I.F.
  TITLE     A family of bacteriocin ABC transporters carry out proteolytic
            processing of their substrates concomitant with export
  JOURNAL   Mol Microbiol 16 (2), 229-240 (1995)
   PUBMED   7565085
REFERENCE   2  (residues 1 to 71)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015377.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03412.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         1..>71
                     /product="cysteine peptidase family C39 domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          3..>69
                     /region_name="Peptidase_C39_like"
                     /note="Peptidase family C39 mostly contains
                     bacteriocin-processing endopeptidases from bacteria. The
                     cysteine peptidases in family C39 cleave the
                     'double-glycine' leader peptides from the precursors of
                     various bacteriocins (mostly non-lantibiotic). The
                     cleavage...; cl00296"
                     /db_xref="CDD:469710"
ORIGIN      
        1 mkipmiyqme nsecglacca milnyfkyei slnelreiyp ssrsgyslls iskvlgdfni
       61 sshafkasvr d
//
LOCUS       WP_235888383            1126 aa            linear   BCT 02-MAR-2025
DEFINITION  tail fiber domain-containing protein, partial [Streptococcus
            pneumoniae].
ACCESSION   WP_235888383
VERSION     WP_235888383.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 1126)
  AUTHORS   Schwarzer,D., Stummeyer,K., Gerardy-Schahn,R. and Muhlenhoff,M.
  TITLE     Characterization of a novel intramolecular chaperone domain
            conserved in endosialidases and other bacteriophage tail spike and
            fiber proteins
  JOURNAL   J Biol Chem 282 (5), 2821-2831 (2007)
   PUBMED   17158460
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025253.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13884.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..1126
                     /product="tail fiber domain-containing protein"
     Region          <417..>522
                     /region_name="auto_Ata"
                     /note="trimeric autotransporter adhesin Ata; NF033481"
                     /db_xref="CDD:411124"
     Region          <628..712
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; cl19911"
                     /db_xref="CDD:418717"
     Region          1032..1082
                     /region_name="Peptidase_S74"
                     /note="Chaperone of endosialidase; pfam13884"
                     /db_xref="CDD:404724"
ORIGIN      
        1 dtlgrykgsa dwkyitftyd ysektnfdql ktllrfnleg atsgtawvtg ikveigsvat
       61 dwspapedad gliteakatf ertaqglrtd lsaiteglrt kvdisalnvt aenirqsvks
      121 letdtqnkln qklsqaefev ragsirqeil natkdkadkt lvvseagklr eefskmkvgg
      181 rnlwiksktv gavieklpen hvtgqkecyr lennstltfn lepdfssrly qkvtfsawik
      241 yenvvqgrnf wnvfncfkhy lfrknsetgv qsgpdydtlg rykgsadwky itftydysek
      301 tnfdqlktsl rfnlegatsg tawvtgikve igsvatdwsp apedadglit eakatferta
      361 qglrtdlsai qeyvnkdgqr qealqrytre estrqatavr elvnrdfvgk atyqedvkgi
      421 nqrieavkts ankdiasqia syrqsvdgkf tdissqitty kqdvggqisg lsnrltsseq
      481 gtttqisnls nrinsnkqgt dnqisnlktq vatnkdnaer qmgrisdqvs ankanadsqf
      541 anvtnqlark vettdfqrvk etsklyeril gntengiadk varmaltnql fqvevaknas
      601 ngqnllkgtk dfsggwknkg anwkkhaeky kgvdvlfknn swngvgqeid akigevytfs
      661 lwmksdwknd tvnfyvnrng svekgwgvps etsvaitsew krysfafkit vdgfifprve
      721 rlnqntnlyi aglklekgsy atpyteaped tdeairsvqs qltgswavqn insagdiisg
      781 inlganghnr fvgklthitg etlidravik samvdklkta nfeagsvttt ildaeavtad
      841 kvrfdaafir kmtandafid qltskrifst kvesvissst fleayqgrig gftigrfaqg
      901 rgrwisginq fsvgmgngeg gsyngentaf wanwghswns pgpnawyvtt sgnmycrnga
      961 dfhgkvdfsn ssranfygnt tfsrspvfsn gielgskdvl gdgwnpkggr navvwwnqvg
     1021 sgsvkywmeq ksdrrlkeni tdtavkaldk inrlrmvafd fienkkheei gliaqeaeti
     1081 vprivsrdpe npdgylhidy talvpylika iqelnqkiek mektia
//
LOCUS       WP_235888416             113 aa            linear   BCT 02-MAR-2025
DEFINITION  phage holin family protein, partial [Streptococcus pneumoniae].
ACCESSION   WP_235888416
VERSION     WP_235888416.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 113)
  AUTHORS   Shi,Y., Yan,Y., Ji,W., Du,B., Meng,X., Wang,H. and Sun,J.
  TITLE     Characterization and determination of holin protein of
            Streptococcus suis bacteriophage SMP in heterologous host
  JOURNAL   Virol J 9, 70 (2012)
   PUBMED   22436471
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 113)
  AUTHORS   Tan,K.S., Wee,B.Y. and Song,K.P.
  TITLE     Evidence for holin function of tcdE gene in the pathogenicity of
            Clostridium difficile
  JOURNAL   J Med Microbiol 50 (7), 613-619 (2001)
   PUBMED   11444771
REFERENCE   3  (residues 1 to 113)
  AUTHORS   Martin,A.C., Lopez,R. and Garcia,P.
  TITLE     Functional analysis of the two-gene lysis system of the
            pneumococcal phage Cp-1 in homologous and heterologous host cells
  JOURNAL   J Bacteriol 180 (2), 210-217 (1998)
   PUBMED   9440507
REFERENCE   4  (residues 1 to 113)
  AUTHORS   Steiner,M., Lubitz,W. and Blasi,U.
  TITLE     The missing link in phage lysis of gram-positive bacteria: gene 14
            of Bacillus subtilis phage phi 29 encodes the functional homolog of
            lambda S protein
  JOURNAL   J Bacteriol 175 (4), 1038-1042 (1993)
   PUBMED   8432697
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016961.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05105.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..113
                     /product="phage holin family protein"
     Region          1..113
                     /region_name="Phage_holin_4_1"
                     /note="Bacteriophage holin family; cl01989"
                     /db_xref="CDD:470425"
ORIGIN      
        1 livsmeiidf vtgtiaaiin pdieykskig inglfrkisg vlllmilipa svllpektgf
       61 aflysiylgy iaftfqslie nyrklkgnvt lfqpivkvfq rllekdddtk kge
//
LOCUS       WP_235888448              86 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Streptococcus pneumoniae].
ACCESSION   WP_235888448
VERSION     WP_235888448.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 86)
  AUTHORS   Davies,D.R., Mahnke Braam,L., Reznikoff,W.S. and Rayment,I.
  TITLE     The three-dimensional structure of a Tn5 transposase-related
            protein determined to 2.9-A resolution
  JOURNAL   J Biol Chem 274 (17), 11904-11913 (1999)
   PUBMED   10207011
REFERENCE   2  (residues 1 to 86)
  AUTHORS   DasSarma,S.
  TITLE     Identification and analysis of the gas vesicle gene cluster on an
            unstable plasmid of Halobacterium halobium
  JOURNAL   Experientia 49 (6-7), 482-486 (1993)
   PUBMED   8335077
REFERENCE   3  (residues 1 to 86)
  AUTHORS   Ferrante,A.A. and Lessie,T.G.
  TITLE     Nucleotide sequence of IS402 from Pseudomonas cepacia
  JOURNAL   Gene 102 (1), 143-144 (1991)
   PUBMED   1650732
REFERENCE   4  (residues 1 to 86)
  AUTHORS   De Meirsman,C., Van Soom,C., Verreth,C., Van Gool,A. and
            Vanderleyden,J.
  TITLE     Nucleotide sequence analysis of IS427 and its target sites in
            Agrobacterium tumefaciens T37
  JOURNAL   Plasmid 24 (3), 227-234 (1990)
   PUBMED   1963949
REFERENCE   5  (residues 1 to 86)
  AUTHORS   Sato,S., Nakada,Y. and Shiratsuchi,A.
  TITLE     IS421, a new insertion sequence in Escherichia coli
  JOURNAL   FEBS Lett 249 (1), 21-26 (1989)
   PUBMED   2542093
REFERENCE   6  (residues 1 to 86)
  AUTHORS   Kroger,M. and Hobom,G.
  TITLE     Structural analysis of insertion sequence IS5
  JOURNAL   Nature 297 (5862), 159-162 (1982)
   PUBMED   6281654
REFERENCE   7  (residues 1 to 86)
  AUTHORS   Klaer,R., Kuhn,S., Tillmann,E., Fritz,H.J. and Starlinger,P.
  TITLE     The sequence of IS4
  JOURNAL   Mol Gen Genet 181 (2), 169-175 (1981)
   PUBMED   6268937
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01609.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..86
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <2..81
                     /region_name="transpos_IS5_4"
                     /note="IS5 family transposase; NF033581"
                     /db_xref="CDD:468098"
ORIGIN      
        1 vdsgyqglmk iypqaqtprk ssklkpltae dkacnhalsk erskvenifa kvktfkmist
       61 tyrnhrkrfg lrmnlivgii nhelgf
//
LOCUS       WP_235888452             190 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Streptococcus pneumoniae].
ACCESSION   WP_235888452
VERSION     WP_235888452.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 190)
  AUTHORS   Vertes,A.A., Inui,M., Kobayashi,M., Kurusu,Y. and Yukawa,H.
  TITLE     Isolation and characterization of IS31831, a transposable element
            from Corynebacterium glutamicum
  JOURNAL   Mol Microbiol 11 (4), 739-746 (1994)
   PUBMED   8196545
REFERENCE   2  (residues 1 to 190)
  AUTHORS   van der Zee,A., Agterberg,C., van Agterveld,M., Peeters,M. and
            Mooi,F.R.
  TITLE     Characterization of IS1001, an insertion sequence element of
            Bordetella parapertussis
  JOURNAL   J Bacteriol 175 (1), 141-147 (1993)
   PUBMED   8093238
REFERENCE   3  (residues 1 to 190)
  AUTHORS   Johansen,E. and Kibenich,A.
  TITLE     Isolation and characterization of IS1165, an insertion sequence of
            Leuconostoc mesenteroides subsp. cremoris and other lactic acid
            bacteria
  JOURNAL   Plasmid 27 (3), 200-206 (1992)
   PUBMED   1325060
REFERENCE   4  (residues 1 to 190)
  AUTHORS   Cirillo,J.D., Barletta,R.G., Bloom,B.R. and Jacobs,W.R. Jr.
  TITLE     A novel transposon trap for mycobacteria: isolation and
            characterization of IS1096
  JOURNAL   J Bacteriol 173 (24), 7772-7780 (1991)
   PUBMED   1660454
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013753.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01610.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..190
                     /product="transposase"
     Region          <4..175
                     /region_name="transpos_ISL3"
                     /note="ISL3 family transposase; NF033550"
                     /db_xref="CDD:468079"
ORIGIN      
        1 tvslpnakiv ldrfhivqhl sramsrvhvq imnqfhrksh eykaikrywk liqqdsrkls
       61 dkrfyrptfr myltnkeiln kllsysedlk hhyqlynkep ekffgliedn lkqvhpifqt
      121 vfktflkdke kiinalqlhy snakleatnn liklikrnaf gfrnfenfkk rifialnikk
      181 ertkfvlsra
//
LOCUS       WP_235888471             186 aa            linear   BCT 02-MAR-2025
DEFINITION  nitroreductase family protein [Mycoplasmopsis mucosicanis].
ACCESSION   WP_235888471
VERSION     WP_235888471.1
KEYWORDS    RefSeq.
SOURCE      Mycoplasmopsis mucosicanis (Mycoplasma mucosicanis)
  ORGANISM  Mycoplasmopsis mucosicanis
            Bacteria; Bacillati; Mycoplasmatota; Mycoplasmoidales;
            Metamycoplasmataceae; Mycoplasmopsis.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   de Oliveira,I.M., Henriques,J.A. and Bonatto,D.
  TITLE     In silico identification of a new group of specific bacterial and
            fungal nitroreductases-like proteins
  JOURNAL   Biochem Biophys Res Commun 355 (4), 919-925 (2007)
   PUBMED   17331467
REFERENCE   2  (residues 1 to 186)
  AUTHORS   Hecht,H.J., Erdmann,H., Park,H.J., Sprinzl,M. and Schmid,R.D.
  TITLE     Crystal structure of NADH oxidase from Thermus thermophilus
  JOURNAL   Nat Struct Biol 2 (12), 1109-1114 (1995)
   PUBMED   8846223
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013077.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00881.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Mycoplasmopsis mucosicanis"
                     /db_xref="taxon:458208"
     Protein         1..186
                     /product="nitroreductase family protein"
                     /calculated_mol_wt=21174
     Region          5..>175
                     /region_name="Nitro_FMN_reductase"
                     /note="nitroreductase family protein; cl00514"
                     /db_xref="CDD:444950"
     Site            order(8,10,29,31..32,34,37..38,40,42,44,46..51,112,
                     117..118,121..122,135..136,148)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:380311"
     Site            order(10,12,14,41,135..136)
                     /site_type="other"
                     /note="FMN binding site [chemical binding]"
                     /db_xref="CDD:380311"
ORIGIN      
        1 mnfadklkqr ytvreydttk kissedykki mdvinsapts snwhsssviv vrdkkilekl
       61 gqankytgsi ktcdmflvfv adfnrmqiah rdfseyeydk hsseaytvav gdafiqatma
      121 qdvaqelgls scflglartm ekdliealni kgqafpvigl sigyplnkge ikpkmnrifw
      181 rqiwhq
//
LOCUS       WP_235888598             137 aa            linear   BCT 02-MAR-2025
DEFINITION  alcohol dehydrogenase catalytic domain-containing protein
            [Lactococcus cremoris].
ACCESSION   WP_235888598
VERSION     WP_235888598.1
KEYWORDS    RefSeq.
SOURCE      Lactococcus cremoris
  ORGANISM  Lactococcus cremoris
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Lactococcus.
REFERENCE   1  (residues 1 to 137)
  AUTHORS   Taneja,B. and Mande,S.C.
  TITLE     Conserved structural features and sequence patterns in the GroES
            fold family
  JOURNAL   Protein Eng 12 (10), 815-818 (1999)
   PUBMED   10556240
REFERENCE   2  (residues 1 to 137)
  AUTHORS   Murzin,A.G.
  TITLE     Structural classification of proteins: new superfamilies
  JOURNAL   Curr Opin Struct Biol 6 (3), 386-394 (1996)
   PUBMED   8804825
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08240.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Lactococcus cremoris"
                     /db_xref="taxon:1359"
     Protein         1..137
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /calculated_mol_wt=14599
     Region          3..>137
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
ORIGIN      
        1 mvkalqykrf gqpevlelvd lptlepkade vsikvshvgl npmdwaimgh pevapnfgvk
       61 lpqtfaydfa gqidqigaev tdfkvgdrvf gttmkgaate qliastkepg lyhtpdfien
      121 dvastlavag ltaaval
//
LOCUS       WP_235888592             253 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease subunit S, partial [Streptococcus
            pneumoniae].
ACCESSION   WP_235888592
VERSION     WP_235888592.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 253)
  AUTHORS   Janscak,P. and Bickle,T.A.
  TITLE     The DNA recognition subunit of the type IB restriction-modification
            enzyme EcoAI tolerates circular permutions of its polypeptide chain
  JOURNAL   J Mol Biol 284 (4), 937-948 (1998)
   PUBMED   9837717
REFERENCE   2  (residues 1 to 253)
  AUTHORS   Bickle,T.A. and Kruger,D.H.
  TITLE     Biology of DNA restriction
  JOURNAL   Microbiol Rev 57 (2), 434-450 (1993)
   PUBMED   8336674
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01420.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..253
                     /product="restriction endonuclease subunit S"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
     Region          89..251
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
ORIGIN      
        1 fpdklkksil qyamqgklve qdpndesvev llekiraekq klfeegkikk kdldisivsq
       61 gddssyygnk dettsypiye ipeawryikf aslvnfrigk tpprseatfw gteipwvsis
      121 dmpisgyvtn tresisklal kskkidispk gtllmsfkls igkvaildip athneaiisi
      181 fpyankenii rdylmiflpl istlgdskda ikgktlnsts isellipisn heemkriisk
      241 vdllfqkvsq lfe
//
LOCUS       WP_235888624             248 aa            linear   BCT 02-MAR-2025
DEFINITION  ImmA/IrrE family metallo-endopeptidase [Lactococcus cremoris].
ACCESSION   WP_235888624
VERSION     WP_235888624.1
KEYWORDS    RefSeq.
SOURCE      Lactococcus cremoris
  ORGANISM  Lactococcus cremoris
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Lactococcus.
REFERENCE   1  (residues 1 to 248)
  AUTHORS   Masiewicz,P., Brzostek,A., Wolanski,M., Dziadek,J. and
            Zakrzewska-Czerwinska,J.
  TITLE     A novel role of the PrpR as a transcription factor involved in the
            regulation of methylcitrate pathway in Mycobacterium tuberculosis
  JOURNAL   PLoS One 7 (8), e43651 (2012)
   PUBMED   22916289
  REMARK    Erratum:[PLoS One. 2014;9(11):e113015]
REFERENCE   2  (residues 1 to 248)
  AUTHORS   Vujicic-Zagar,A., Dulermo,R., Le Gorrec,M., Vannier,F., Servant,P.,
            Sommer,S., de Groot,A. and Serre,L.
  TITLE     Crystal structure of the IrrE protein, a central regulator of DNA
            damage repair in deinococcaceae
  JOURNAL   J Mol Biol 386 (3), 704-716 (2009)
   PUBMED   19150362
REFERENCE   3  (residues 1 to 248)
  AUTHORS   Bose,B., Auchtung,J.M., Lee,C.A. and Grossman,A.D.
  TITLE     A conserved anti-repressor controls horizontal gene transfer by
            proteolysis
  JOURNAL   Mol Microbiol 70 (3), 570-582 (2008)
   PUBMED   18761623
REFERENCE   4  (residues 1 to 248)
  AUTHORS   Gerstmeir,R., Cramer,A., Dangel,P., Schaffer,S. and Eikmanns,B.J.
  TITLE     RamB, a novel transcriptional regulator of genes involved in
            acetate metabolism of Corynebacterium glutamicum
  JOURNAL   J Bacteriol 186 (9), 2798-2809 (2004)
   PUBMED   15090522
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017885.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06114.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Lactococcus cremoris"
                     /db_xref="taxon:1359"
     Protein         1..248
                     /product="ImmA/IrrE family metallo-endopeptidase"
                     /calculated_mol_wt=28368
     Region          93..>167
                     /region_name="Peptidase_M78"
                     /note="IrrE N-terminal-like domain; cl01076"
                     /db_xref="CDD:470062"
ORIGIN      
        1 mnyffqkrnk knvelsafff rsndfselek kkynttedka ivayryvpvf dianttgepv
       61 ltahdfitne ytteqteifc tsklnkvaeh iekeygisis fkpldkdigg yyrpkdhtia
      121 lnslnskteq lktlfhefah sqlhglnsdf idrptgyket qaeavayiam qnvgidtsey
      181 slgyvatwak dktviheals eihkvsnkti dmtdhliqel gldqnlatky kslqkeatqn
      241 nnpelkkn
//
LOCUS       WP_235888625             215 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: restriction endonuclease subunit S [Lactobacillales].
ACCESSION   WP_235888625
VERSION     WP_235888625.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillales
  ORGANISM  Lactobacillales
            Bacteria; Bacillati; Bacillota; Bacilli.
REFERENCE   1  (residues 1 to 215)
  AUTHORS   Janscak,P. and Bickle,T.A.
  TITLE     The DNA recognition subunit of the type IB restriction-modification
            enzyme EcoAI tolerates circular permutions of its polypeptide chain
  JOURNAL   J Mol Biol 284 (4), 937-948 (1998)
   PUBMED   9837717
REFERENCE   2  (residues 1 to 215)
  AUTHORS   Bickle,T.A. and Kruger,D.H.
  TITLE     Biology of DNA restriction
  JOURNAL   Microbiol Rev 57 (2), 434-450 (1993)
   PUBMED   8336674
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01420.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Lactobacillales"
                     /db_xref="taxon:186826"
     Protein         1..215
                     /product="restriction endonuclease subunit S"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=24612
     Region          4..>97
                     /region_name="PDDEXK_nuclease-like"
                     /note="PDDEXK family nucleases; cl40440"
                     /db_xref="CDD:477358"
     Region          <114..214
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
     Site            order(136,139..140,142..143,169,171,177,181,184..185,210,
                     212..213)
                     /site_type="other"
                     /note="TRD-CR/TRD-CR interface [polypeptide binding]"
                     /db_xref="CDD:341131"
ORIGIN      
        1 mshseqmien qfiqilseke nqwtyrpdlk seealwqnfr ghlnrinlav leeqlltdke
       61 fkqvkvefsr ltgtpflasq wlrgengvaq vlleredgkk vtleafrnkd isggtssyev
      121 vigrgvaaik gnefifqnlg kmksdgywtr ystgstfesi nstdikeaii svptieeqnk
      181 igsffkqldn tialhqrkld llkeqkkgfl qkmfv
//
LOCUS       WP_235888628             108 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: lactococcin family bacteriocin [Lactococcus].
ACCESSION   WP_235888628
VERSION     WP_235888628.1
KEYWORDS    RefSeq.
SOURCE      Lactococcus (lactic streptococci)
  ORGANISM  Lactococcus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016272.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04369.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Lactococcus"
                     /db_xref="taxon:1357"
     Protein         1..108
                     /product="lactococcin family bacteriocin"
                     /GO_component="GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /GO_process="GO:0042742 - defense response to bacterium
                     [Evidence IEA]"
                     /calculated_mol_wt=11524
     Region          <61..98
                     /region_name="Lactococcin"
                     /note="Lactococcin-like family; pfam04369"
                     /db_xref="CDD:113152"
ORIGIN      
        1 mnklktkfit valasaiitv gysasasads vttspsptnn paliissfmn vefegggywt
       61 ntshltyiqn tgsgvlyydr vnhkyvfsqt rgamgaaiyv fnaqgvnw
//
LOCUS       WP_235888642             150 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-dependent oxidoreductase [Streptococcus pneumoniae].
ACCESSION   WP_235888642
VERSION     WP_235888642.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 150)
  AUTHORS   van Der Ploeg,J.R., Iwanicka-Nowicka,R., Bykowski,T.,
            Hryniewicz,M.M. and Leisinger,T.
  TITLE     The Escherichia coli ssuEADCB gene cluster is required for the
            utilization of sulfur from aliphatic sulfonates and is regulated by
            the transcriptional activator Cbl
  JOURNAL   J Biol Chem 274 (41), 29358-29365 (1999)
   PUBMED   10506196
REFERENCE   2  (residues 1 to 150)
  AUTHORS   Kertesz,M.A., Schmidt-Larbig,K. and Wuest,T.
  TITLE     A novel reduced flavin mononucleotide-dependent methanesulfonate
            sulfonatase encoded by the sulfur-regulated msu operon of
            Pseudomonas aeruginosa
  JOURNAL   J Bacteriol 181 (5), 1464-1473 (1999)
   PUBMED   10049377
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015325.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03358.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         1..150
                     /product="NAD(P)H-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=17501
     Region          <1..88
                     /region_name="WrbA"
                     /note="Multimeric flavodoxin WrbA, includes
                     NAD(P)H:quinone oxidoreductase [Energy production and
                     conversion]; COG0655"
                     /db_xref="CDD:440420"
ORIGIN      
        1 msspvylqnv svdtknfier iggwshlfrl agkfvvtldv aesngsdnvs eylrdifsym
       61 ggqilhqvsi tnslkdiaea qlmeatykie dvlegkikyk ttdyqerayq tlklilenyd
      121 sehfekmywe kkrlfeansl eewyyvenik
//
LOCUS       WP_235888659             303 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Streptococcus pneumoniae].
ACCESSION   WP_235888659
VERSION     WP_235888659.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 303)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 303)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 303)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 303)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         1..>303
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <1..>302
                     /region_name="SunT"
                     /note="ABC-type bacteriocin/lantibiotic exporters, contain
                     an N-terminal double-glycine peptidase domain [Defense
                     mechanisms]; COG2274"
                     /db_xref="CDD:441875"
ORIGIN      
        1 msslsgfrel ftnqvvggvv digtilsvvi ymflssktls iialilslin flflfstrki
       61 mydtvnrelq eqsliysvet ealntissik isgledeiye nwskylknvl tkykkrsivh
      121 ilynsatnvf qlfapiiili fgldnvlngk illgevvafq tmasilfsse isifnaytqy
      181 ilaagylnrv ndiwleneen venglkkcsl egridikdls fsyskdsapv ienlnltiep
      241 gqrialvgqs gsgkstlski lsglykidtg kilfdgvnin qidkkilsqn lgvvpqdsfl
      301 lnr
//
LOCUS       WP_235888691              72 aa            linear   BCT 02-MAR-2025
DEFINITION  iron-containing alcohol dehydrogenase, partial [Streptococcus
            pneumoniae].
ACCESSION   WP_235888691
VERSION     WP_235888691.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012678.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00465.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         1..>72
                     /product="iron-containing alcohol dehydrogenase"
                     /EC_number="1.1.1.1"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
     Region          10..>72
                     /region_name="DHQ_Fe-ADH"
                     /note="Dehydroquinate synthase-like (DHQ-like) and
                     iron-containing alcohol dehydrogenases (Fe-ADH); cl02872"
                     /db_xref="CDD:445950"
ORIGIN      
        1 mhvscwdryg kgvvnevgpy ikelgykkal lvtdkyiegs dilpkvlkpl dtegieyvif
       61 sdvepnptck nv
//
LOCUS       WP_235888750             720 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 N-terminal domain-containing protein
            [Ruoffia tabacinasalis].
ACCESSION   WP_235888750
VERSION     WP_235888750.1
KEYWORDS    RefSeq.
SOURCE      Ruoffia tabacinasalis
  ORGANISM  Ruoffia tabacinasalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Aerococcaceae; Ruoffia.
REFERENCE   1  (residues 1 to 720)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00933.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Ruoffia tabacinasalis"
                     /db_xref="taxon:87458"
     Protein         1..720
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=79482
     Region          15..708
                     /region_name="PRK15098"
                     /note="beta-glucosidase BglX"
                     /db_xref="CDD:185053"
ORIGIN      
        1 merfsnmkqv dlvalfnemt ldekigqlvq ltpdffeqgg eitgpvkewe ldseqlsrvg
       61 silgtqkasq vyniqkeyle qsrlkipllf madiihgyet ifpiplamas sfdeaiikea
      121 arlsahegtn agihvtfspn adyvkdarwg rvmetngedp ilsaaltraf iegyqgtdla
      181 kdknslaacv khfigygaaq agrdyntvdi sdiemyqnyl pafkaaidag vklvmtsfnt
      241 iqgipvsgnk rviqktlrqd lnfegvlisd wasiaelvph gvakdgyesa elafdagvdi
      301 dmmsdsylsh lnlivnaenl dklnesvlrv lnlknalglf edpyrglekd sldkktidgl
      361 rdstrkiaer sivllkndgi lplkngqnvg ligpkatsqd ilgawswmgq ndkaisladg
      421 lasksinlst ldfsenenit deyiekakkl akeldiviia vgeksdesge gsslvniels
      481 rkqdrliqei skinaktivi vfsgrplals nineearaii qawfpgsegg nalanilmgd
      541 anpqaklpms fprsvgqlpn tyaqmstgrp kkndnkneky isqyldelnt plypfghgls
      601 yseftlehit lsketmtrae aitvgadlkn ishikgstvv qlylqdvvaq vtrpmrelkk
      661 wsvetvnakd ekeiefiite edlayvhsdl tqradvgefk lylgfdsqsa myigsihltd
//
LOCUS       WP_235888853             225 aa            linear   BCT 02-MAR-2025
DEFINITION  PRD domain-containing protein, partial [Streptococcus pneumoniae].
ACCESSION   WP_235888853
VERSION     WP_235888853.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 225)
  AUTHORS   Graille,M., Zhou,C.Z., Receveur-Brechot,V., Collinet,B.,
            Declerck,N. and van Tilbeurgh,H.
  TITLE     Activation of the LicT transcriptional antiterminator involves a
            domain swing/lock mechanism provoking massive structural changes
  JOURNAL   J Biol Chem 280 (15), 14780-14789 (2005)
   PUBMED   15699035
REFERENCE   2  (residues 1 to 225)
  AUTHORS   Declerck,N., Dutartre,H., Receveur,V., Dubois,V., Royer,C.,
            Aymerich,S. and van Tilbeurgh,H.
  TITLE     Dimer stabilization upon activation of the transcriptional
            antiterminator LicT
  JOURNAL   J Mol Biol 314 (4), 671-681 (2001)
   PUBMED   11733988
REFERENCE   3  (residues 1 to 225)
  AUTHORS   van Tilbeurgh,H. and Declerck,N.
  TITLE     Structural insights into the regulation of bacterial signalling
            proteins containing PRDs
  JOURNAL   Curr Opin Struct Biol 11 (6), 685-693 (2001)
   PUBMED   11751049
REFERENCE   4  (residues 1 to 225)
  AUTHORS   van Tilbeurgh,H., Le Coq,D. and Declerck,N.
  TITLE     Crystal structure of an activated form of the PTS regulation domain
            from the LicT transcriptional antiterminator
  JOURNAL   EMBO J 20 (14), 3789-3799 (2001)
   PUBMED   11447120
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013070.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00874.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..225
                     /product="PRD domain-containing protein"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
     Region          <4..222
                     /region_name="PRK09772"
                     /note="transcriptional antiterminator BglG; Provisional"
                     /db_xref="CDD:170086"
ORIGIN      
        1 nmtrftemfi nvplelvyit ekiinlgkit lgnnfdeiiy inltdhisss ierykegiii
       61 snplrweisk yykeefelgk ralqiikkel gielpideaa fialhfvnan lennfqesyk
      121 iteiimgiek iiqdfyctef nqdsidyyrf ithiklfahr lventtycdd ddedllalmk
      181 nkypreyecg eqvamfiqte ynylltssel vylmahirrl tknld
//
LOCUS       WP_235888865             208 aa            linear   BCT 02-MAR-2025
DEFINITION  isocitrate/isopropylmalate family dehydrogenase, partial
            [Streptococcus pneumoniae].
ACCESSION   WP_235888865
VERSION     WP_235888865.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012407.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00180.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..>208
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /GO_function="GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
     Region          1..>208
                     /region_name="Iso_dh"
                     /note="Isocitrate/isopropylmalate dehydrogenase; cl00445"
                     /db_xref="CDD:444908"
ORIGIN      
        1 ivalvgdgig peimeaglev lealaektgf dyeidrrpfg gadidaagpp lpdetlkasr
       61 eadaillvai gspqydgvav rpeqglmalr kelnlyanir pvkifdslky lsplkperia
      121 gvdfvvvrel tgeiyfgdhi leerkardin dysyeeveri irkafeiarn rrkivtsidk
      181 qnvlatsklw rkvaeevaqd fpdvtleh
//
LOCUS       WP_235888881             108 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase N-terminal domain-containing protein, partial
            [Streptococcus pneumoniae].
ACCESSION   WP_235888881
VERSION     WP_235888881.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025851.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14498.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..>108
                     /product="glycoside hydrolase N-terminal domain-containing
                     protein"
     Region          <2..107
                     /region_name="Glyco_hyd_65N_2"
                     /note="Glycosyl hydrolase family 65, N-terminal domain;
                     pfam14498"
                     /db_xref="CDD:405224"
ORIGIN      
        1 ereldldtai snvvfepnsc nlqikreyft sfnknilccr ivssvqntln lninlgrnkr
       61 fndevsklds stilmsasag grkgvqfkvv chskvtdgev svlgetiv
//
LOCUS       WP_235888946             232 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF4336 domain-containing protein [Maritimibacter].
ACCESSION   WP_235888946
VERSION     WP_235888946.1
KEYWORDS    RefSeq.
SOURCE      Maritimibacter
  ORGANISM  Maritimibacter
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025594.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14234.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Maritimibacter"
                     /db_xref="taxon:404235"
     Protein         1..232
                     /product="DUF4336 domain-containing protein"
                     /calculated_mol_wt=25301
     Region          26..>152
                     /region_name="DUF4336"
                     /note="Domain of unknown function (DUF4336); pfam14234"
                     /db_xref="CDD:433796"
ORIGIN      
        1 mldefadgiw langpevvaa mgfhyptrmv vvrltdgalw lwspvalsqd iraavdaigp
       61 vgylvapnhl hhvfladwae aypraeiwaa pglaekrgdl afagtlgndp appwsdvieq
      121 vvipgnritt evvfyhipsr tvlfcdllqq lpvgwfkgwr aivarldgmi glepsvpkkf
      181 rvafsdkdaa raavrrilgw spkavvvahg apvttdgtav lerafawlrp rk
//
LOCUS       WP_235888883             116 aa            linear   BCT 02-MAR-2025
DEFINITION  PTS system mannose/fructose/sorbose family transporter subunit IID,
            partial [Streptococcus pneumoniae].
ACCESSION   WP_235888883
VERSION     WP_235888883.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015570.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03613.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..>116
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
     Region          1..>116
                     /region_name="ManZ"
                     /note="Phosphotransferase system,
                     mannose/fructose/N-acetylgalactosamine-specific IID
                     component [Carbohydrate transport and metabolism];
                     COG3716"
                     /db_xref="CDD:442930"
ORIGIN      
        1 gfnysnyqgl gyanvmypal kkhygedqeg fyqaleence fyntnphflp fitslhlvml
       61 engrpaketr sikmalmgpl agigdslsqf claplfstia asfaqeglvv gpilff
//
LOCUS       WP_235888971             294 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar motor protein MotB [Glacieibacterium frigidum].
ACCESSION   WP_235888971
VERSION     WP_235888971.1
KEYWORDS    RefSeq.
SOURCE      Glacieibacterium frigidum
  ORGANISM  Glacieibacterium frigidum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Glacieibacterium.
REFERENCE   1  (residues 1 to 294)
  AUTHORS   Hosking,E.R., Vogt,C., Bakker,E.P. and Manson,M.D.
  TITLE     The Escherichia coli MotAB proton channel unplugged
  JOURNAL   J Mol Biol 364 (5), 921-937 (2006)
   PUBMED   17052729
REFERENCE   2  (residues 1 to 294)
  AUTHORS   Braun,T.F., Al-Mawsawi,L.Q., Kojima,S. and Blair,D.F.
  TITLE     Arrangement of core membrane segments in the MotA/MotB
            proton-channel complex of Escherichia coli
  JOURNAL   Biochemistry 43 (1), 35-45 (2004)
   PUBMED   14705929
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025057.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13677.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Glacieibacterium frigidum"
                     /db_xref="taxon:2593303"
     Protein         1..294
                     /product="flagellar motor protein MotB"
                     /calculated_mol_wt=31328
     Region          11..289
                     /region_name="motB"
                     /note="motility protein MotB; PRK09041"
                     /db_xref="CDD:236365"
ORIGIN      
        1 mkldpathfe pevvvrwktd khaahhggaw kiayadfvta mmafflllwi igatnedqrk
       61 giadyftptv iqmknsggsn gvgggrsmam degqalraag dgkrptplaa gggggplesa
      121 vaspdkatap garrladear fakvrrvvaa rlagdptlkg lkgqirfvpt regmridive
      181 radfsmfgsg tsvftpeala lvrtvaralk dgpsaltvrg htdavaynrg dannwtlsta
      241 radatrrvlr dagvddarfr riegvaatdp fnpkdrtdpr nrrisvtily sgga
//
LOCUS       WP_235888976              81 aa            linear   BCT 02-MAR-2025
DEFINITION  glutaredoxin domain-containing protein [Glacieibacterium frigidum].
ACCESSION   WP_235888976
VERSION     WP_235888976.1
KEYWORDS    RefSeq.
SOURCE      Glacieibacterium frigidum
  ORGANISM  Glacieibacterium frigidum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Glacieibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012675.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00462.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Glacieibacterium frigidum"
                     /db_xref="taxon:2593303"
     Protein         1..81
                     /product="glutaredoxin domain-containing protein"
                     /GO_function="GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=8949
     Region          <16..77
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 mssailyrmv lpdhvcpfgv aahqllqdgg yevddrllqt reevdafkee hgvdttpqif
       61 idderiggsd elraylsdra g
//
LOCUS       WP_235889025             223 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Glacieibacterium
            frigidum].
ACCESSION   WP_235889025
VERSION     WP_235889025.1
KEYWORDS    RefSeq.
SOURCE      Glacieibacterium frigidum
  ORGANISM  Glacieibacterium frigidum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Glacieibacterium.
REFERENCE   1  (residues 1 to 223)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 223)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Glacieibacterium frigidum"
                     /db_xref="taxon:2593303"
     Protein         1..223
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=22921
     Region          13..222
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(16,18..19,21,68..70,120..122,138,142,170..173)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(94,122,138,142)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 milpsfgpdl ravvvgasgg iggalveala lrgevtgltr adldltdpas itsaaaridr
       61 pldlvivatg slgapekalr dldatrladq favnaigpal vaqaflpklr tdrrtgfavl
      121 sarvgsiadn rlggwhayra skaalnqlvr tmaieharrc plgvcvalhp gtvdtglsap
      181 fqrgvrelft pavaaghllt vldglqpadt ggffawdgsa iaf
//
LOCUS       WP_235889001             525 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase HerA-like domain-containing protein [Maritimibacter
            alexandrii].
ACCESSION   WP_235889001
VERSION     WP_235889001.1
KEYWORDS    RefSeq.
SOURCE      Maritimibacter alexandrii
  ORGANISM  Maritimibacter alexandrii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Maritimibacter.
REFERENCE   1  (residues 1 to 525)
  AUTHORS   Huang,Q., Liu,L., Liu,J., Ni,J., She,Q. and Shen,Y.
  TITLE     Efficient 5'-3' DNA end resection by HerA and NurA is essential for
            cell viability in the crenarchaeon Sulfolobus islandicus
  JOURNAL   BMC Mol Biol 16, 2 (2015)
   PUBMED   25880130
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 525)
  AUTHORS   Rzechorzek,N.J., Blackwood,J.K., Bray,S.M., Maman,J.D.,
            Pellegrini,L. and Robinson,N.P.
  TITLE     Structure of the hexameric HerA ATPase reveals a mechanism of
            translocation-coupled DNA-end processing in archaea
  JOURNAL   Nat Commun 5, 5506 (2014)
   PUBMED   25420454
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 525)
  AUTHORS   Constantinesco,F., Forterre,P., Koonin,E.V., Aravind,L. and Elie,C.
  TITLE     A bipolar DNA helicase gene, herA, clusters with rad50, mre11 and
            nurA genes in thermophilic archaea
  JOURNAL   Nucleic Acids Res 32 (4), 1439-1447 (2004)
   PUBMED   14990749
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017669.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05872.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Maritimibacter alexandrii"
                     /db_xref="taxon:2570355"
     Protein         1..525
                     /product="helicase HerA-like domain-containing protein"
                     /calculated_mol_wt=56889
     Region          24..525
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 mvggldgaif vggggeeyat kqelllkyan rhglvagatg tgktvtlqil segfskagvp
       61 vfvsdvkgdl sglaatmsad hklhepfqkr agiigfedya yeafpvtfwd iygeqghpir
      121 ttvsemgpll lsrlleltdv qegvlniafr vadeqgmpll dledlqallv wvgqnaedls
      181 lrygnvatas vgaiqrallv lenqggkrlf gepalelsdm mrtepngqgr isilaadklm
      241 aspklyatfl lwllselfee lpevgdpdkp klvfffdeah llfddapkal vdkveqvarl
      301 irskgvgvyf vtqnpadvpe dvlgqlgnri qhalraftak drkdlrqaae tyrdnprfst
      361 edairevgvg eavtsfleak gapgvvertl irppssylga idpalrksvi dtspiagkye
      421 alidresaae ilaaraeaaa keaeaaetav aepedtagpr efnnarrydg grspsrttrk
      481 ttkkddrsfg sqvgeevtkv iikelkgttg rrivrgifgt ifkar
//
LOCUS       WP_235889123             127 aa            linear   BCT 02-MAR-2025
DEFINITION  glyoxalase superfamily protein [Maritimibacter alexandrii].
ACCESSION   WP_235889123
VERSION     WP_235889123.1
KEYWORDS    RefSeq.
SOURCE      Maritimibacter alexandrii
  ORGANISM  Maritimibacter alexandrii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Maritimibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040323.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19581.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Maritimibacter alexandrii"
                     /db_xref="taxon:2570355"
     Protein         1..127
                     /product="glyoxalase superfamily protein"
                     /GO_process="GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /calculated_mol_wt=14209
     Region          13..127
                     /region_name="Glyoxalase_7"
                     /note="Glyoxalase superfamily protein; pfam19581"
                     /db_xref="CDD:437413"
ORIGIN      
        1 mtgnadmkag aavpilrsfs eaeardfylr ylgfevvfeh rfapdlplym svkrgdcelh
       61 lsehhgdaap gsavrievad ieafhaeite rghkrlrpgi qhqswgasev mlndpfgnri
      121 ifweskd
//
LOCUS       WP_235889149             340 aa            linear   BCT 02-MAR-2025
DEFINITION  nitrilase-related carbon-nitrogen hydrolase [Glacieibacterium
            frigidum].
ACCESSION   WP_235889149
VERSION     WP_235889149.1
KEYWORDS    RefSeq.
SOURCE      Glacieibacterium frigidum
  ORGANISM  Glacieibacterium frigidum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Glacieibacterium.
REFERENCE   1  (residues 1 to 340)
  AUTHORS   Pace,H.C. and Brenner,C.
  TITLE     The nitrilase superfamily: classification, structure and function
  JOURNAL   Genome Biol 2 (1), REVIEWS0001 (2001)
   PUBMED   11380987
REFERENCE   2  (residues 1 to 340)
  AUTHORS   Bork,P. and Koonin,E.V.
  TITLE     A new family of carbon-nitrogen hydrolases
  JOURNAL   Protein Sci 3 (8), 1344-1346 (1994)
   PUBMED   7987228
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012993.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00795.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Glacieibacterium frigidum"
                     /db_xref="taxon:2593303"
     Protein         1..340
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /GO_process="GO:0008152 - metabolic process [Evidence
                     IEA]"
                     /calculated_mol_wt=36753
     Region          3..298
                     /region_name="nitrilase"
                     /note="Nitrilase superfamily, including nitrile- or
                     amide-hydrolyzing enzymes and amide-condensing enzymes;
                     cl11424"
                     /db_xref="CDD:448250"
     Site            order(61,137,141,151,178..179,181..182,203)
                     /site_type="active"
                     /db_xref="CDD:143587"
     Site            order(61,137,178)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:143587"
     Site            order(138..141,150,157..158,179,181..185,188..189,
                     215..216,218..220,222..223,248..249,294..297)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143587"
ORIGIN      
        1 mtyaavamql tarsvegcad raavstqvra hiadvatqlh aacifieqyg gapvrlavlp
       61 eylftsypgr igvgdfaekv afdvdgpeya algkvaqdrg lhlavnayer dvhfpglyfq
      121 aslvfapsgd cvlryrrlns mfaptphdvw tayldhygid gvfpvartei gnlsaiasee
      181 ivypeiarah alrgaevfvh ssseigspnp thkalakrar afenlayvvs antagisgta
      241 lplasadgns cvvdwrgavl sesnsgetft afadidlhal raarrkpgmt nylarqrtel
      301 fahnpqvqpa drlantvptr ddfrrahdev iarldregli
//
LOCUS       WP_235889165             177 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Maritimibacter alexandrii].
ACCESSION   WP_235889165
VERSION     WP_235889165.1
KEYWORDS    RefSeq.
SOURCE      Maritimibacter alexandrii
  ORGANISM  Maritimibacter alexandrii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Maritimibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024824.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13432.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Maritimibacter alexandrii"
                     /db_xref="taxon:2570355"
     Protein         1..177
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=19471
     Region          58..>159
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Site            order(58,61..62,65..66,68,92,95..96,99..100,102..103,126,
                     129..130,133..134,137)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          58..85
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          90..120
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          125..153
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mrrmiltlcl laspafaada erlnelftsl enadetsweq ienkiwsews esgspamdll
       61 lqrgreatte eryeeaiehl talvenapdf aegwnarata yyaagligps lhdiartlel
      121 eprhfgalsg lgrileetgn dpaaleayse alsihphrps liraverleg alegksi
//
LOCUS       WP_235889192              37 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4160 domain-containing protein [Glacieibacterium frigidum].
ACCESSION   WP_235889192
VERSION     WP_235889192.1
KEYWORDS    RefSeq.
SOURCE      Glacieibacterium frigidum
  ORGANISM  Glacieibacterium frigidum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Glacieibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025088.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13711.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..37
                     /organism="Glacieibacterium frigidum"
                     /db_xref="taxon:2593303"
     Protein         1..37
                     /product="DUF4160 domain-containing protein"
                     /calculated_mol_wt=3944
     Region          1..>24
                     /region_name="DUF4160"
                     /note="Domain of unknown function (DUF4160); pfam13711"
                     /db_xref="CDD:463963"
ORIGIN      
        1 mytddhepph vhvsgdgelk vvirgltacp nlsmlsr
//
LOCUS       WP_235889317             279 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease [Glacieibacterium frigidum].
ACCESSION   WP_235889317
VERSION     WP_235889317.1
KEYWORDS    RefSeq.
SOURCE      Glacieibacterium frigidum
  ORGANISM  Glacieibacterium frigidum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Glacieibacterium.
REFERENCE   1  (residues 1 to 279)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01061.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Glacieibacterium frigidum"
                     /db_xref="taxon:2593303"
     Protein         1..279
                     /product="ABC transporter permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=30121
     Region          26..279
                     /region_name="ABC2_membrane"
                     /note="ABC-2 type transporter; cl21474"
                     /db_xref="CDD:473876"
ORIGIN      
        1 mldktaqppl nsghaepgvm iitgvnwqgl ktlylkevrr ffkvqlqtvw apaittllfl
       61 vifavamtga rpsvmgvpyv dflgpglivm gmiqnsfant sstlliakvq gtivdvlmpp
      121 lshgellsaw vagavtrawl vgvavwlaml lapgvdvpir hplvvlyfgt mgaamlallg
      181 vltgiwadkf dhaaavtnfv vqpltllsgt fyaidrvset mrivshlnpf fyvidgfryg
      241 flgvsdglav qgaivllvan lvlwvvcyrl lksgwrlra
//
LOCUS       WP_235889324             337 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Glacieibacterium frigidum].
ACCESSION   WP_235889324
VERSION     WP_235889324.1
KEYWORDS    RefSeq.
SOURCE      Glacieibacterium frigidum
  ORGANISM  Glacieibacterium frigidum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Glacieibacterium.
REFERENCE   1  (residues 1 to 337)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 337)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Glacieibacterium frigidum"
                     /db_xref="taxon:2593303"
     Protein         1..337
                     /product="VOC family protein"
                     /calculated_mol_wt=36889
     Region          4..111
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
     Region          149..301
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 miriediahv rfaapdfstm rafledfgls csewngclyg ratdgrpfvh vtqpgpakfl
       61 avgfraasvd dlkalaghdg vsvedadepg ggkivrltdp dgygvevvag qkqadtsats
      121 vdhaynsiaa rprlraavrl dpapahvhri ghavlkvsdf rrseawyker fgfltsdeie
      181 aasdvplgaf mrcdcgdrpt dhhtlflaql pgelgllhaa fevanlddlm lghqhlkark
      241 rqpawgvgrh imgsqifdyw kdpfgneleh wtdgdlftaa dppnkmpmsa llavqwgaph
      301 pmfagkappp palvafvtgl flrfkrllrr epkrita
//
LOCUS       WP_235889384             390 aa            linear   BCT 02-MAR-2025
DEFINITION  enolase C-terminal domain-like protein [Brucella gallinifaecis].
ACCESSION   WP_235889384
VERSION     WP_235889384.1
KEYWORDS    RefSeq.
SOURCE      Brucella gallinifaecis (Ochrobactrum gallinifaecis)
  ORGANISM  Brucella gallinifaecis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 390)
  AUTHORS   Thoden,J.B., Taylor Ringia,E.A., Garrett,J.B., Gerlt,J.A.,
            Holden,H.M. and Rayment,I.
  TITLE     Evolution of enzymatic activity in the enolase superfamily:
            structural studies of the promiscuous o-succinylbenzoate synthase
            from Amycolatopsis
  JOURNAL   Biochemistry 43 (19), 5716-5727 (2004)
   PUBMED   15134446
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024771.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13378.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Brucella gallinifaecis"
                     /db_xref="taxon:215590"
     Protein         1..390
                     /product="enolase C-terminal domain-like protein"
                     /calculated_mol_wt=42580
     Region          3..380
                     /region_name="enolase_like"
                     /note="Enolase-superfamily, characterized by the presence
                     of an enolate anion intermediate which is generated by
                     abstraction of the alpha-proton of the carboxylate
                     substrate by an active site residue and is stabilized by
                     coordination to the essential Mg2+ ion; cl40480"
                     /db_xref="CDD:477366"
     Site            order(202,229,257)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:238188"
     Site            order(280,327)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:238188"
ORIGIN      
        1 mstiesvkiv gfkyevenls lddggfnivi apgknhtlmr haivirdsdg vegqyvtgwg
       61 gtpaaiaqvl qlspmlvgrd plqreaiysd fkyglrqtdm mgiglldicl wdlagkkfga
      121 svstllggyk sevvayastl hgdrngrlcs peayvdfaae ckelgyrgfk vhgfsegdpk
      181 eeaqtvrllg kafgdsmnlm ldpscdlrtf saavevgrac deanfmwled pyrdngvsqh
      241 gakrlkefir tpllltehvr glepkadfiv sgatdyvrad pefdlgitgt ikiahlaesf
      301 gldvelhspg paqrhcisai rntnfyestl vgpgmknalp qvytcgysdn ldainhdgtf
      361 piptgpglgv sydweminkn vitthefvrd
//
LOCUS       WP_235889407             283 aa            linear   BCT 02-MAR-2025
DEFINITION  metal ABC transporter substrate-binding protein [Brucella
            gallinifaecis].
ACCESSION   WP_235889407
VERSION     WP_235889407.1
KEYWORDS    RefSeq.
SOURCE      Brucella gallinifaecis (Ochrobactrum gallinifaecis)
  ORGANISM  Brucella gallinifaecis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10100136
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Brucella gallinifaecis"
                     /db_xref="taxon:215590"
     Protein         1..283
                     /product="metal ABC transporter substrate-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /calculated_mol_wt=30612
     Region          2..282
                     /region_name="PsaA"
                     /note="Metal binding protein PsaA. These proteins have
                     been shown to function as initial receptors in ABC
                     transport of Mn2+ and as surface adhesins in some
                     eubacterial species. They belong to the TroA superfamily
                     of periplasmic metal binding proteins that...; cd01137"
                     /db_xref="CDD:238557"
     Site            order(48,113,179,254)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:238557"
ORIGIN      
        1 mllasgsvfa gekfkavttf tviadiarnv agdaatiesi tkpgaeihey qptpgdlika
       61 qdadlilwng lnlelwfekf fsrlknvpsa vvsdgvvpms isegpysgkp nphawmspss
      121 aliyvdnird alvkydpdna dtykanaeky kaeiiatidp ikaelttipa dkrwlvtseg
      181 afsylardfd lkelylwpin adqqgtpqqv rkvidavran dipavfsest vssapakqva
      241 retgakyggv lyvdslsead gpvptyidll kvtsdtiakg lkq
//
LOCUS       WP_235889537             122 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase, partial [Brucella
            gallinifaecis].
ACCESSION   WP_235889537
VERSION     WP_235889537.1
KEYWORDS    RefSeq.
SOURCE      Brucella gallinifaecis (Ochrobactrum gallinifaecis)
  ORGANISM  Brucella gallinifaecis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 122)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Brucella gallinifaecis"
                     /db_xref="taxon:215590"
     Protein         <1..122
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
     Region          <24..119
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 wwrhnrggnp lnetpetvqt nrttsdvnyq wgfpalinak tetefarqva lasfpngtvi
       61 edfrprtase dfafmleqkp gayffvgngd saglhspdyn fnddillpaa lfwvrlteas
      121 ln
//
LOCUS       WP_235889564             206 aa            linear   BCT 02-MAR-2025
DEFINITION  CDP-glycerol glycerophosphotransferase family protein
            [Streptococcus pneumoniae].
ACCESSION   WP_235889564
VERSION     WP_235889564.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 206)
  AUTHORS   Fitzgerald,S.N. and Foster,T.J.
  TITLE     Molecular analysis of the tagF gene, encoding
            CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase of
            Staphylococcus epidermidis ATCC 14990
  JOURNAL   J Bacteriol 182 (4), 1046-1052 (2000)
   PUBMED   10648531
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016357.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04464.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         1..206
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0047355 - CDP-glycerol
                     glycerophosphotransferase activity [Evidence IEA]"
                     /calculated_mol_wt=24348
     Region          16..>195
                     /region_name="Glyphos_transf"
                     /note="CDP-Glycerol:Poly(glycerophosphate)
                     glycerophosphotransferase; cl42225"
                     /db_xref="CDD:478041"
ORIGIN      
        1 mkmnilqyik ilartifmll istvllpvrl knnkilfinf ngkgygdnpk siceylrtty
       61 pdldlvwlar dnegfpdgvr vvkygtfqaf yeqasskvwv ynvrafaril kkrgqiyiqt
      121 whgassfkli ekqadlpiny vleakydarv tdimisdsrk qteefqkyfw ysgeifevgm
      181 prndalfhyk edydklyqkr tkhsfr
//
LOCUS       WP_235889567             368 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase-fold protein [Flavobacterium restrictum].
ACCESSION   WP_235889567
VERSION     WP_235889567.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium restrictum
  ORGANISM  Flavobacterium restrictum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 368)
  AUTHORS   Goins,C.M., Dajnowicz,S., Smith,M.D., Parks,J.M. and Ronning,D.R.
  TITLE     Mycolyltransferase from Mycobacterium tuberculosis in covalent
            complex with tetrahydrolipstatin provides insights into antigen 85
            catalysis
  JOURNAL   J Biol Chem 293 (10), 3651-3662 (2018)
   PUBMED   29352107
REFERENCE   2  (residues 1 to 368)
  AUTHORS   van Straaten,K.E., Gonzalez,C.F., Valladares,R.B., Xu,X.,
            Savchenko,A.V. and Sanders,D.A.
  TITLE     The structure of a putative S-formylglutathione hydrolase from
            Agrobacterium tumefaciens
  JOURNAL   Protein Sci 18 (10), 2196-2202 (2009)
   PUBMED   19653299
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012958.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00756.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Flavobacterium restrictum"
                     /db_xref="taxon:2594428"
     Protein         1..368
                     /product="alpha/beta hydrolase-fold protein"
                     /calculated_mol_wt=42834
     Region          24..86
                     /region_name="E_set"
                     /note="Early set domain associated with the catalytic
                     domain of sugar utilizing enzymes at either the N or C
                     terminus; cl28984"
                     /db_xref="CDD:475140"
     Region          26..>55
                     /region_name="AMPK1_CBM"
                     /note="Glycogen recognition site of AMP-activated protein
                     kinase; pfam16561"
                     /db_xref="CDD:465176"
     Region          118..362
                     /region_name="YbbA"
                     /note="Predicted hydrolase of the alpha/beta superfamily
                     [General function prediction only]; COG2819"
                     /db_xref="CDD:442067"
ORIGIN      
        1 mssaekpmqa glqiilttde ddlrpvyisg nfnnwrtqdp dfvmeqlgiy yykfifppnf
       61 vypsklfykf tkgdwsevei dnngnrtenr stkihlgiqk ehvprwrknw lpfkqsflpq
      121 vhlisdefei pqlnktrkiw allphdydkt derypvmylq daqnlfneka kygnweidkk
      181 lavmseykig kiiiiaieha eedrvkeynv gktvlgkgeg kkyirfvtdt lkpfvdsnfr
      241 tkkereftgi ggssmgglvs ifsglrnpev ygklmifsps lwvvpelkis spknkatdtk
      301 vylyaggnes etmleqvqkf kvnmmenafv kdtsrinlsi nmqgkhsety wsdefpkaie
      361 wlffqpks
//
LOCUS       WP_235889612             320 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Flavobacterium restrictum].
ACCESSION   WP_235889612
VERSION     WP_235889612.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium restrictum
  ORGANISM  Flavobacterium restrictum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024118.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12706.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Flavobacterium restrictum"
                     /db_xref="taxon:2594428"
     Protein         1..320
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=35326
     Region          26..320
                     /region_name="PDE1"
                     /note="cAMP phosphodiesterase [Signal transduction
                     mechanisms]; COG5212"
                     /db_xref="CDD:444071"
ORIGIN      
        1 mmtfltrfwi ililvsipmv aqqepkaafq vvplgvkggt desnlsaylv apigtkdyic
       61 ldagtlhvgi ekavanaift vsanevlrky ikgycishah ldhvsgliin spadssktiy
      121 atkkcmemme nhyfngqtwa nfgdeglgfp lkkyhfqtlt lgeqtkitnt tmtvksfals
      181 hvnpfestaf lvqngtnsvl ylgdtgpdvv eksdklgllw naiapliaqk slraifievs
      241 fpneqpdsfl fghltphylm qelhllaklt gnttlkgfki ivthmkppak nsqiikkqlq
      301 elndlgvvfl fpeqgvrlel
//
LOCUS       WP_235889627             492 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Flavobacterium restrictum].
ACCESSION   WP_235889627
VERSION     WP_235889627.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium restrictum
  ORGANISM  Flavobacterium restrictum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 492)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Flavobacterium restrictum"
                     /db_xref="taxon:2594428"
     Protein         1..492
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=55751
     Region          22..289
                     /region_name="GH43_XYL-like"
                     /note="Glycosyl hydrolase family 43, beta-D-xylosidase
                     (uncharacterized); cd09002"
                     /db_xref="CDD:350116"
     Site            order(33,50,82..83,126..127,182,246,273)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:350116"
     Region          315..489
                     /region_name="GH43_C2"
                     /note="Beta xylosidase C-terminal Concanavalin A-like
                     domain; pfam17851"
                     /db_xref="CDD:436093"
ORIGIN      
        1 mfflsfatna qqqsakinse fyqnpifagd ypdpsiirdg eeyyivhssf nyypglliws
       61 skdllnwkpv thalkksvgs vwapdlvkyn ntfyiyfpan etnyvvwada ingpwsepid
      121 lkignidpgh fvdengnryl yfsngnyvpl skdglsvagd gkhvydgwki pkdwsiecfc
      181 megpkivkhg eyyyltvaeg gtagpatshm visarskspl gpwenspynp iirtnessek
      241 wwskghatli ddsngkwwmv fhgyekdfyn mgrqtllqpl ewtsdgwykt pesiktqepi
      301 kkpagqsikn nfslsdsfls aelkpqwqff deynenrfkl tengivikgk gnnigdsspl
      361 lctpsnhsyt aqvevtiegs ataglilfyd sklytgiaad kenvlailrs wqfstqkgin
      421 krhlflrlek keqlvnmfys sdgkewvkie nsaevssfnh nvlsgfmslr lglsavgegq
      481 vtfknfvykp ek
//
LOCUS       WP_235889818             443 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Brucella haematophila].
ACCESSION   WP_235889818
VERSION     WP_235889818.1
KEYWORDS    RefSeq.
SOURCE      Brucella haematophila (Ochrobactrum haematophilum)
  ORGANISM  Brucella haematophila
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 443)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 443)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 443)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 443)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Brucella haematophila"
                     /db_xref="taxon:419474"
     Protein         1..443
                     /product="ATP-binding protein"
                     /calculated_mol_wt=48153
     Region          <184..434
                     /region_name="PRK10815"
                     /note="two-component system sensor histidine kinase PhoQ"
                     /db_xref="CDD:182754"
ORIGIN      
        1 mstlwviaal vvvatligsl ysdaarsnfe rlltahlfsl vgavsvsaeg vlqgrpelge
       61 lryssplsgw ywsvdpiapn msgklespsl igrivpempi tqapfdssfm rsyslpglng
      121 eelfivetev vldnsgrvar frvmgnlsev mneisdfrtk laaylavfgi gsilinaaii
      181 lfglrpldkv rqaladireg rsskldaslp meiaplarem naliennrri versrtqvgn
      241 lahslktpls vlvnegraig gdqgrvvqeq seamqvqiqh ylqrariaaq rdsvvfrtsv
      301 apvmermhrv taklnpalhv slrndlphai fagekedlee iignllenag kwasrrvsit
      361 vgaaldgqrl feivieddgp glaadkieaa lkrgsrvdet kpgtglglai vqdtvreygg
      421 qlhldkspmg glrvrtvlpl aed
//
LOCUS       WP_235889888             627 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: SIR2 family protein [Alphaproteobacteria].
ACCESSION   WP_235889888
VERSION     WP_235889888.1
KEYWORDS    RefSeq.
SOURCE      Alphaproteobacteria (a-proteobacteria)
  ORGANISM  Alphaproteobacteria
            Bacteria; Pseudomonadati; Pseudomonadota.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024685.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13289.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Alphaproteobacteria"
                     /db_xref="taxon:28211"
     Protein         1..627
                     /product="SIR2 family protein"
                     /calculated_mol_wt=69313
     Region          20..>158
                     /region_name="SIR2"
                     /note="SIR2 superfamily of proteins includes silent
                     information regulator 2 (Sir2) enzymes which catalyze
                     NAD+-dependent protein/histone deacetylation, where the
                     acetyl group from the lysine epsilon-amino group is
                     transferred to the ADP-ribose moiety of NAD+; cl00195"
                     /db_xref="CDD:444738"
     Region          136..286
                     /region_name="SIR2"
                     /note="SIR2 superfamily of proteins includes silent
                     information regulator 2 (Sir2) enzymes which catalyze
                     NAD+-dependent protein/histone deacetylation, where the
                     acetyl group from the lysine epsilon-amino group is
                     transferred to the ADP-ribose moiety of NAD+; cl00195"
                     /db_xref="CDD:444738"
ORIGIN      
        1 mpiktisaaq fatafdlrpn lvawflgaga saasgiptgy amirdfkaqi fcretnlsrr
       61 eidtadpiwi dridaffrqn sllppdgdpt eyakafeavy pearhrrqyi ddaiskgtpc
      121 fghkvlgslm aagkvncvft tnfdplvees ahsangilpv ddqnrptvaa idsadramrc
      181 lnesdwplva klhgdyqsit ikntgselee qdtrmrhmlv esgkrfgmif vgysgrdasi
      241 mealntvldg pspfpnglyw ltssvsrllp aviefldraq aagvdvavve catfdelaad
      301 iikitdlpqp lldrvmegrp tprlvpvqip htkarafpvl rysaillqsm ptaarrirls
      361 qsttsaevre ifkakgyrat aavlgrelaa fgrdqeilda laplspsltg tidldpvads
      421 wavgllydtl vrslarqrpl ipryrrsghs lvvatprdgd dpdrtrrqqq tlsrlrdayg
      481 tslfgtvpkl gfpfqeglhl kleqvdgkww cgfepytfvq lprqdtsqtd gdeglvaeea
      541 paemgmraer rgdpagdwrr erwaprynrn wasiigawaq lltetggttr safgledgtg
      601 idavfkvspv tgfsrpshhh tyfdrsk
//
LOCUS       WP_235889897             304 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Brucella haematophila].
ACCESSION   WP_235889897
VERSION     WP_235889897.1
KEYWORDS    RefSeq.
SOURCE      Brucella haematophila (Ochrobactrum haematophilum)
  ORGANISM  Brucella haematophila
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 304)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 304)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Brucella haematophila"
                     /db_xref="taxon:419474"
     Protein         1..304
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=32615
     Region          33..286
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(111..112,115,145)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238566"
ORIGIN      
        1 mltrrqillg llsgpglalc agpsgflhqv qagdaprivs idwaaaeaml slgivpvgls
       61 dtsfyrqrma spvlpdtvad vgpfweinle alaelrpdfi iatdynmvmt priadvarve
      121 lvpsittpnv eryqlavdil nrvaelcgvp rsgadaiaqm aedrfaeara klaghnhpvg
      181 imlpdiggre mtmygagtlp davlrklgla niwtgpvngt gmaragldrl mdnpdaaflv
      241 vdipsqrlqt erslqqntmw kllapvrnkr vawlnqfhpf ggiasavhls gliasaltqm
      301 peka
//
LOCUS       WP_235889977             407 aa            linear   BCT 02-MAR-2025
DEFINITION  3-deoxy-D-manno-octulosonic acid transferase [Maribrevibacterium
            harenarium].
ACCESSION   WP_235889977
VERSION     WP_235889977.1
KEYWORDS    RefSeq.
SOURCE      Maribrevibacterium harenarium
  ORGANISM  Maribrevibacterium harenarium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Maribrevibacterium.
REFERENCE   1  (residues 1 to 407)
  AUTHORS   Chung,H.S. and Raetz,C.R.
  TITLE     Interchangeable domains in the Kdo transferases of Escherichia coli
            and Haemophilus influenzae
  JOURNAL   Biochemistry 49 (19), 4126-4137 (2010)
   PUBMED   20394418
REFERENCE   2  (residues 1 to 407)
  AUTHORS   Lobau,S., Mamat,U., Brabetz,W. and Brade,H.
  TITLE     Molecular cloning, sequence analysis, and functional
            characterization of the lipopolysaccharide biosynthetic gene kdtA
            encoding 3-deoxy-alpha-D-manno-octulosonic acid transferase of
            Chlamydia pneumoniae strain TW-183
  JOURNAL   Mol Microbiol 18 (3), 391-399 (1995)
   PUBMED   8748024
REFERENCE   3  (residues 1 to 407)
  AUTHORS   Belunis,C.J. and Raetz,C.R.
  TITLE     Biosynthesis of endotoxins. Purification and catalytic properties
            of 3-deoxy-D-manno-octulosonic acid transferase from Escherichia
            coli
  JOURNAL   J Biol Chem 267 (14), 9988-9997 (1992)
   PUBMED   1577828
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11445568
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Maribrevibacterium harenarium"
                     /db_xref="taxon:2589817"
     Protein         1..407
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /EC_number="2.4.99.-"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=45911
     Region          17..407
                     /region_name="KdtA"
                     /note="3-deoxy-D-manno-octulosonic-acid transferase [Cell
                     wall/membrane/envelope biogenesis]; COG1519"
                     /db_xref="CDD:441128"
ORIGIN      
        1 mlglsllstl llpvygficl rfkwrfpsvy rlrdvlglrg pkgtyqrwlh casvgevlaa
       61 kplldawlge gykvfvttyt ptgaqqlqrl fhgrvehcyl pidhplfisl wsrklhfdil
      121 vlfemefwpv llayfsnspk vvinarmser sfrryqkwpr lsrsvfasft rvlactrvda
      181 kriaalgsps vevagnikfd vnvadaiekp kfslsglkaw aavsthegee erilqvhqql
      241 rrslpelvli lvprhperfr kvealarqdf dyvmtrsqnt adqwsqaqvv igdsmgellh
      301 ycsmaqvvfm ggslierggh nplepaalgk avvsgthtfn felvyrelsa ldgvavvest
      361 keleekllvl ltntakankq gqiaqeyvrt hqgalgrvlq siesmvk
//
LOCUS       WP_235889981             312 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein
            [Maribrevibacterium harenarium].
ACCESSION   WP_235889981
VERSION     WP_235889981.1
KEYWORDS    RefSeq.
SOURCE      Maribrevibacterium harenarium
  ORGANISM  Maribrevibacterium harenarium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Maribrevibacterium.
REFERENCE   1  (residues 1 to 312)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Maribrevibacterium harenarium"
                     /db_xref="taxon:2589817"
     Protein         1..312
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=35825
     Region          4..306
                     /region_name="PRK11139"
                     /note="DNA-binding transcriptional activator GcvA;
                     Provisional"
                     /db_xref="CDD:182990"
ORIGIN      
        1 mmslpplksl pvfeavarln sfshaaaelr itqsavshhi kaledhlges lfvrsgrkle
       61 ltlegqqyld titsslnqia ratdlikgas etrlrltvys sfavywlipr mpelkrrfpn
      121 leltlemsya epelsdrvad cfitidkekr gfhfdllyke rlfpvcstay leeikhtlhv
      181 hddqelhahl aaspqslanf plltsfsmye kyteewrrwf asmgtnlppn aqfhrfshlm
      241 layegakhgl gvalindyml qsnsddglvr lpcshyated hfyfaykhsr rhepaiaqlk
      301 qwiqqesssl rv
//
LOCUS       WP_235889991             513 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding domain-containing protein [Maribrevibacterium
            harenarium].
ACCESSION   WP_235889991
VERSION     WP_235889991.1
KEYWORDS    RefSeq.
SOURCE      Maribrevibacterium harenarium
  ORGANISM  Maribrevibacterium harenarium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Maribrevibacterium.
REFERENCE   1  (residues 1 to 513)
  AUTHORS   Mees,A., Klar,T., Gnau,P., Hennecke,U., Eker,A.P., Carell,T. and
            Essen,L.O.
  TITLE     Crystal structure of a photolyase bound to a CPD-like DNA lesion
            after in situ repair
  JOURNAL   Science 306 (5702), 1789-1793 (2004)
   PUBMED   15576622
REFERENCE   2  (residues 1 to 513)
  AUTHORS   Tamada,T., Kitadokoro,K., Higuchi,Y., Inaka,K., Yasui,A., de
            Ruiter,P.E., Eker,A.P. and Miki,K.
  TITLE     Crystal structure of DNA photolyase from Anacystis nidulans
  JOURNAL   Nat Struct Biol 4 (11), 887-891 (1997)
   PUBMED   9360600
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015406.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03441.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Maribrevibacterium harenarium"
                     /db_xref="taxon:2589817"
     Protein         1..513
                     /product="FAD-binding domain-containing protein"
                     /calculated_mol_wt=59932
     Region          16..470
                     /region_name="PhrB"
                     /note="Deoxyribodipyrimidine photolyase [Replication,
                     recombination and repair]; COG0415"
                     /db_xref="CDD:440184"
ORIGIN      
        1 madfslnnaa tmqdrpilvw lkrdlrltdh epllyaastg kpvlllylfe pmllddphyd
       61 erhwrfvwqs ltdlnrqltg vgaavhirqg ealetlekly qdirfdsits teeiglnntf
      121 ardkavaawc tdhqidwref pcgavirals hredwdkrwq ktmrtpitpi pldqipwlsi
      181 gqpelhlpea wqtpqkgmqt ggptlawqtl hsfydgrgqd yyrsissplt srsactrlsp
      241 yltwgnislr evyqdllsrw qtpgwrrtlv alssrlhwhc hfmqkfesec emefrpvnra
      301 yeafpyrqdd rvdadllawm qgetgvpmid acmralyhtg yinfrmraml vsflthhlni
      361 dwrlgvhhla rlfldfepgi hypqfqmqag itgantiriy npvkqaedqd pegtfirrwv
      421 pelkevpapl ihtpwdmspm eeglyqcelg kdyprpivdl klaakeardr lwgfrkneqv
      481 qqekyrilat hvrppnarek arraakrkes esp
//
LOCUS       WP_235890004             226 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Maribrevibacterium harenarium].
ACCESSION   WP_235890004
VERSION     WP_235890004.1
KEYWORDS    RefSeq.
SOURCE      Maribrevibacterium harenarium
  ORGANISM  Maribrevibacterium harenarium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Maribrevibacterium.
REFERENCE   1  (residues 1 to 226)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Maribrevibacterium harenarium"
                     /db_xref="taxon:2589817"
     Protein         1..226
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=24630
     Region          16..219
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mndkseekdv iaishvlive dipeirdwly grimdafttp timsvaslaa akeaikqrtw
       61 dlvlldlglp dgngtelirp lktyspnchc iittifddse hifpalsaga dgyllkdeee
      121 gefcnnlrgi lagrpplsss iaqqvlmslr rptpppassl tpreeeilvl iargyrckda
      181 analgvsynt acgylksvyq klqinsraea tlkaielgii sttdtp
//
LOCUS       WP_235890016             354 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing phosphohydrolase [Maribrevibacterium
            harenarium].
ACCESSION   WP_235890016
VERSION     WP_235890016.1
KEYWORDS    RefSeq.
SOURCE      Maribrevibacterium harenarium
  ORGANISM  Maribrevibacterium harenarium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Maribrevibacterium.
REFERENCE   1  (residues 1 to 354)
  AUTHORS   Galperin,M.Y. and Chou,S.H.
  TITLE     Sequence Conservation, Domain Architectures, and Phylogenetic
            Distribution of the HD-GYP Type c-di-GMP Phosphodiesterases
  JOURNAL   J Bacteriol 204 (4), e0056121 (2022)
   PUBMED   34928179
REFERENCE   2  (residues 1 to 354)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024878.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13487.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Maribrevibacterium harenarium"
                     /db_xref="taxon:2589817"
     Protein         1..354
                     /product="HD domain-containing phosphohydrolase"
                     /calculated_mol_wt=39551
     Region          23..124
                     /region_name="REC_PA4781-like"
                     /note="phosphoacceptor receiver (REC) domain of cyclic
                     di-GMP phosphodiesterase PA4781 and similar domains;
                     cd19920"
                     /db_xref="CDD:381147"
     Region          <105..350
                     /region_name="HDGYP"
                     /note="HD-GYP domain, c-di-GMP phosphodiesterase class II
                     (or its inactivated variant) [Signal transduction
                     mechanisms]; COG2206"
                     /db_xref="CDD:441808"
ORIGIN      
        1 mldldymnds lalhdadiap rtilvvddma dnidilrsil shhyqvrvak sgeqalaqie
       61 kkapdlilld immpgmngfe vcrsikqnph tkaipvifvt amssvederl gfevggadfi
      121 tkpitplttl arvrshiela erqyrhelli aqrtqqlees lrsavsmlsv vsnykdedta
      181 shmgrmadys allasaigws neecerirla aplhdigkig vpdsilkapr altdserlvm
      241 qqhtqfgydi lsqsqaplfk maaqialahh erwdgtgypr glkaddipla ariitladvf
      301 daltskrpyk tawgltetfh hlkseagklf dpnlvelfiq cepqirevme kwsd
//
LOCUS       WP_235890034             275 aa            linear   BCT 02-MAR-2025
DEFINITION  putative RNA methyltransferase [Maribrevibacterium harenarium].
ACCESSION   WP_235890034
VERSION     WP_235890034.1
KEYWORDS    RefSeq.
SOURCE      Maribrevibacterium harenarium
  ORGANISM  Maribrevibacterium harenarium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Maribrevibacterium.
REFERENCE   1  (residues 1 to 275)
  AUTHORS   Das,K., Acton,T., Chiang,Y., Shih,L., Arnold,E. and Montelione,G.T.
  TITLE     Crystal structure of RlmAI: implications for understanding the 23S
            rRNA G745/G748-methylation at the macrolide antibiotic-binding site
  JOURNAL   Proc Natl Acad Sci U S A 101 (12), 4041-4046 (2004)
   PUBMED   14999102
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF045339.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21302.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Maribrevibacterium harenarium"
                     /db_xref="taxon:2589817"
     Protein         1..275
                     /product="putative RNA methyltransferase"
                     /calculated_mol_wt=30199
     Region          8..275
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(96..102,121..122,142..143,160)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
ORIGIN      
        1 mpsfemllcp ldaaplsrta sglscpnghs fdfaktgyvn llpvqnkhsk dpgdskamvs
       61 arreflesgl yspiveeilr srsadllsra itvldagcge gyyttrihaa ngggsrvfgi
      121 diskwaiqsa skrskeiawv vgsnariplp dasldwlvct fgfpifeefl rvlkpggwll
      181 mvdpgadhll emrrilyptl ksftlpygeq lagfkpaevt tarylaqlss qaqisqllsm
      241 tphqhkspka grdalskler ldvtvdvclr wyqkl
//
LOCUS       WP_235890047             267 aa            linear   BCT 02-MAR-2025
DEFINITION  replication protein P [Maribrevibacterium harenarium].
ACCESSION   WP_235890047
VERSION     WP_235890047.1
KEYWORDS    RefSeq.
SOURCE      Maribrevibacterium harenarium
  ORGANISM  Maribrevibacterium harenarium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Maribrevibacterium.
REFERENCE   1  (residues 1 to 267)
  AUTHORS   Mallory,J.B., Alfano,C. and McMacken,R.
  TITLE     Host virus interactions in the initiation of bacteriophage lambda
            DNA replication. Recruitment of Escherichia coli DnaB helicase by
            lambda P replication protein
  JOURNAL   J Biol Chem 265 (22), 13297-13307 (1990)
   PUBMED   2165499
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018671.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06992.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Maribrevibacterium harenarium"
                     /db_xref="taxon:2589817"
     Protein         1..267
                     /product="replication protein P"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /calculated_mol_wt=30597
     Region          49..198
                     /region_name="Phage_lambda_P"
                     /note="Replication protein P; pfam06992"
                     /db_xref="CDD:462061"
ORIGIN      
        1 mkapqpiqql lnpiekksgt pfatsttqtg nqagaqqggn evhertkvlv nmvfarfrai
       61 ytnrfdsays tsddlklakr ewalalkgfq epllayaver vkerfawppt iseflseiht
      121 ayqsyglkep rqayleacss sgdprlvkws hpavfhagsd cgwsrlrsee eriswpmfeq
      181 ayqkiidrvm agetlsipvv tmiehqqape letlmqkirk qidapeqewa hhlyylyktk
      241 gtgirqqyrq raqftlaklg yreelpe
//
LOCUS       WP_235890053             131 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Maribrevibacterium harenarium].
ACCESSION   WP_235890053
VERSION     WP_235890053.1
KEYWORDS    RefSeq.
SOURCE      Maribrevibacterium harenarium
  ORGANISM  Maribrevibacterium harenarium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Maribrevibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Maribrevibacterium harenarium"
                     /db_xref="taxon:2589817"
     Protein         1..131
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=14406
     Region          1..121
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mvkewqdgel vlnqpaghve ngetlqqavm retleesgwq vepkaivgly aftpfvgadt
       61 yhrvlihcea igevtthlds didsahwltm deicasklrs plvqagfddy lkgqgfplem
      121 idnshispvt a
//
LOCUS       WP_235890060             462 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Maribrevibacterium harenarium].
ACCESSION   WP_235890060
VERSION     WP_235890060.1
KEYWORDS    RefSeq.
SOURCE      Maribrevibacterium harenarium
  ORGANISM  Maribrevibacterium harenarium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Maribrevibacterium.
REFERENCE   1  (residues 1 to 462)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 462)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 462)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 462)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Maribrevibacterium harenarium"
                     /db_xref="taxon:2589817"
     Protein         1..462
                     /product="ATP-binding protein"
                     /calculated_mol_wt=52595
     Region          3..461
                     /region_name="PRK10549"
                     /note="two-component system sensor histidine kinase BaeS"
                     /db_xref="CDD:182539"
ORIGIN      
        1 mqirhklfav fvlsnilliv smwqvfqwsf drgfvtyate rdrdfleqma nrtanlylyy
       61 edwyflvqes rleeewqrak lenlrdlipp pstpnldliy psqyyrqrfl lfdedkapli
      121 gdvafvdaet hevevageiv gyvglrsmra lvqdqtlrfv rqqgeaflli safmltiaal
      181 ltwplaqwls rpistirqgt krlsagkfdt ririkgsdel adlgrdfnhl astlehmrea
      241 rkkwvadtah elrtpvailr geieamqdgi ikvtpdslas lqqetlhiar liddlnqlsm
      301 hdvgnlnyqm edvevldile qsvsamqrqf edagldielq aphksklrit gdtdrlhqlf
      361 anlmnntlky tnapgkltik ltkeqkqavi cfedtppgvs eedlpkifdq ffrvensrnr
      421 atggrglgla ictnivdghq gtinaypaps gglgikvvfp li
//
LOCUS       WP_235890066             630 aa            linear   BCT 02-MAR-2025
DEFINITION  VWA domain-containing protein [Maribrevibacterium harenarium].
ACCESSION   WP_235890066
VERSION     WP_235890066.1
KEYWORDS    RefSeq.
SOURCE      Maribrevibacterium harenarium
  ORGANISM  Maribrevibacterium harenarium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Maribrevibacterium.
REFERENCE   1  (residues 1 to 630)
  AUTHORS   Bork,P. and Rohde,K.
  TITLE     More von Willebrand factor type A domains? Sequence similarities
            with malaria thrombospondin-related anonymous protein,
            dihydropyridine-sensitive calcium channel and inter-alpha-trypsin
            inhibitor
  JOURNAL   Biochem J 279 (Pt 3) (Pt 3), 908-910 (1991)
   PUBMED   1659389
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012321.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00092.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Maribrevibacterium harenarium"
                     /db_xref="taxon:2589817"
     Protein         1..630
                     /product="VWA domain-containing protein"
                     /calculated_mol_wt=68957
     Region          <30..215
                     /region_name="YfbK"
                     /note="Secreted protein containing bacterial Ig-like
                     domain and vWFA domain [General function prediction only];
                     COG2304"
                     /db_xref="CDD:441879"
ORIGIN      
        1 mkirtkiqta llalaalgap qlwadtqfrv ivdasgsmvi sdpdkltsea lklisnlape
       61 ekatlgiwlf gerprvllpe spvtpelkqq laryvdgyvt edlktdlesi lrlllqtpds
      121 gelapdfdrh wilvtdgmvd islddkvnaa sraritdnla vqlaekgihl htvsmtgytd
      181 kellqslsdl tnashtevat peelldtfdr vfaqaapsee lpfegntffv ddaveeatll
      241 vfhepgitpa ilkpggvpls ltasnvstaa akhytmvtit kpvvgtwsve nidlarssir
      301 vitklsaqat kvppvlfine piystvglfq ddrlltdeqi ldlvdvrqkl iflagetpkq
      361 lrdipvqral nqyknkierl ieqgnyqlat ivdgktftrq lnqyfsvapa ielqvepase
      421 slvrvratpt nlrlntlrsn aklvvdyhsg teqveemtlq gagywekvlp vtanatlsir
      481 vrlvgvtrtg mrfdydtpvw svirngadqv svkqgplpaq aepeldalaa lgavnrtvap
      541 vvvtpqiavv depettppta elddaptaqv edetspveep pvapvglttt ewllygglnl
      601 lavalagggy ffwrrrkaqr qqqegevedv
//
LOCUS       WP_235890098              97 aa            linear   BCT 02-MAR-2025
DEFINITION  Arm DNA-binding domain-containing protein [Maribrevibacterium
            harenarium].
ACCESSION   WP_235890098
VERSION     WP_235890098.1
KEYWORDS    RefSeq.
SOURCE      Maribrevibacterium harenarium
  ORGANISM  Maribrevibacterium harenarium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Maribrevibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12167.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Maribrevibacterium harenarium"
                     /db_xref="taxon:2589817"
     Protein         1..97
                     /product="Arm DNA-binding domain-containing protein"
                     /calculated_mol_wt=11158
     Region          <1..47
                     /region_name="Arm-DNA-bind_2"
                     /note="Arm DNA-binding domain; pfam12167"
                     /db_xref="CDD:432377"
ORIGIN      
        1 mntrcreqts fkntianrrr lekllvtiea emlagtfrya khfpdskyvq kfsekelelh
       61 dplewsnlrn qrvipllkss flnglsatkl pgvnlip
//
LOCUS       WP_235890162             261 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6048 family protein [Flavobacterium gawalongense].
ACCESSION   WP_235890162
VERSION     WP_235890162.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium gawalongense
  ORGANISM  Flavobacterium gawalongense
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039966.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19515.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Flavobacterium gawalongense"
                     /db_xref="taxon:2594432"
     Protein         1..261
                     /product="DUF6048 family protein"
                     /calculated_mol_wt=29991
     Region          37..245
                     /region_name="DUF6048"
                     /note="Domain of unknown function (DUF6048); pfam19515"
                     /db_xref="CDD:437347"
ORIGIN      
        1 mlslflaqaq dtdtiqrkkm devipeapkp itkklpeekk ndtivktdry gfrvgvdlyk
       61 ltralydkdy kglelvgdyr ltkkyflaae vgnenkttdd drlntttkgs ylkvgfdyng
      121 yenwldmeni isigmrygvs tfsqqlntyk iynanpyfge vpvitsgnky ngltaswiev
      181 vagvkakvfn nvfmgfslrl nrlvtnkepd nfknlyipgf nrtydgdfgv gfnytvtyfi
      241 pfykkkvtpk kveikkedqk k
//
LOCUS       WP_235890242             235 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase domain-containing protein [Sandaracinobacter
            neustonicus].
ACCESSION   WP_235890242
VERSION     WP_235890242.1
KEYWORDS    RefSeq.
SOURCE      Sandaracinobacter neustonicus
  ORGANISM  Sandaracinobacter neustonicus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandaracinobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025033.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13649.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Sandaracinobacter neustonicus"
                     /db_xref="taxon:1715348"
     Protein         1..235
                     /product="methyltransferase domain-containing protein"
                     /calculated_mol_wt=26772
     Region          1..233
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
ORIGIN      
        1 mrwpdfsera depewmdvrd ypladfaavl ddlevvnrvt raapptlgfl erltagwapg
       61 sdlrvadlgy gqggmlrtih rwaearglrp kltgvdmnpr cralaeartp pemaidwhlg
      121 dlfdwqpaer phaivsalfa hhlptpdvvr llrwqegmat hgwfvndlhr hwfawggfsa
      181 lawaarwhpc vrhdgalsvr rafvreewqa mladagvpae irwhplfrlc vgrik
//
LOCUS       WP_235890225              72 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Flavobacterium gawalongense].
ACCESSION   WP_235890225
VERSION     WP_235890225.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium gawalongense
  ORGANISM  Flavobacterium gawalongense
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 72)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 72)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Flavobacterium gawalongense"
                     /db_xref="taxon:2594432"
     Protein         1..72
                     /product="VOC family protein"
                     /calculated_mol_wt=7995
     Region          <13..63
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mgrtnenenr skisisaesk eeadklfsgl saggqiempi sdspwgsyfg mfrdkygiew
       61 ivnfdpnykg qi
//
LOCUS       WP_235890229             102 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Flavobacterium gawalongense].
ACCESSION   WP_235890229
VERSION     WP_235890229.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium gawalongense
  ORGANISM  Flavobacterium gawalongense
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 102)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 102)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Flavobacterium gawalongense"
                     /db_xref="taxon:2594432"
     Protein         1..102
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=11591
     Region          <2..88
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(44,47,71,80)
                     /site_type="active"
                     /db_xref="CDD:271185"
ORIGIN      
        1 mlkiinkykn qqiglipkis nqkmnvylke igvlcgidkn ltwyvarhtf attvtlgngv
       61 kienvsammg htnimqtqhy akvldanvme dmfklmkkyk ni
//
LOCUS       WP_235890278             609 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein
            [Sandaracinobacter neustonicus].
ACCESSION   WP_235890278
VERSION     WP_235890278.1
KEYWORDS    RefSeq.
SOURCE      Sandaracinobacter neustonicus
  ORGANISM  Sandaracinobacter neustonicus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandaracinobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Sandaracinobacter neustonicus"
                     /db_xref="taxon:1715348"
     Protein         1..609
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=64447
     Region          23..597
                     /region_name="MsbA_rel"
                     /note="ABC transporter, permease/ATP-binding protein;
                     TIGR02204"
                     /db_xref="CDD:131259"
ORIGIN      
        1 mnapsppppp rsdsraheap psrklsnlal lwgyvrrypa qlaaalaali vaasatlaip
       61 qgfklvvdkg fgageganis pyfmgllgiv lvmgmatavr fyfvswlger vvadlrrdvq
      121 ahlvrldpgf feinrpseia srltadtsii dqvvatsvsv alrnlfmgvg giiylfvlsp
      181 kltglmlivi plvilpivlm grrvrtlsqk sqdrvadvgs mvsevlraik vvqafgaeer
      241 etqrfggave aafatarkrf slragmtaiv itlvfgaitl vlwegardvi agemsggtit
      301 afvlaaaiva gafgaltevy gdflraagas arlrdllaer ptisrpdrpq alplppegrl
      361 afehvafryp srpemaalrd ftlqvapger vavvgpsgag kstlfqlvqr fydpsegrll
      421 mdgvdlrlad paevrariai vpqeavvfmg tarsnilygr pdaseaevwa aaeaanaatf
      481 lralpggldt elgeggsqls ggqrqriaia railknapil lldeatsald aeseaavqda
      541 lerlmqgrts lviahrlatv kdadrivvmd ggaivevgrh delvaaggly srlaglqavg
      601 aeaggalsr
//
LOCUS       WP_235890282             176 aa            linear   BCT 02-MAR-2025
DEFINITION  redoxin family protein [Sandaracinobacter neustonicus].
ACCESSION   WP_235890282
VERSION     WP_235890282.1
KEYWORDS    RefSeq.
SOURCE      Sandaracinobacter neustonicus
  ORGANISM  Sandaracinobacter neustonicus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandaracinobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020123.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08534.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Sandaracinobacter neustonicus"
                     /db_xref="taxon:1715348"
     Protein         1..176
                     /product="redoxin family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=18554
     Region          41..163
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 mkgkrliwll plllfaglva lmanhlgapq qqvikshmvg kplaefaleg vagapglalv
       61 dlkgggpvlv nifaswclpc aveapqlqal kdrgatihgi alrdepadva gflarhgnpf
      121 trigqdpggr mmlafgasgv petyvvdaqg viryqhlgei raehvdllma elekak
//
LOCUS       WP_235890325             366 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleotide kinase domain-containing protein [Sandaracinobacter
            neustonicus].
ACCESSION   WP_235890325
VERSION     WP_235890325.1
KEYWORDS    RefSeq.
SOURCE      Sandaracinobacter neustonicus
  ORGANISM  Sandaracinobacter neustonicus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandaracinobacter.
REFERENCE   1  (residues 1 to 366)
  AUTHORS   Lee,Y.J., Dai,N., Muller,S.I., Guan,C., Parker,M.J., Fraser,M.E.,
            Walsh,S.E., Sridar,J., Mulholland,A., Nayak,K., Sun,Z., Lin,Y.C.,
            Comb,D.G., Marks,K., Gonzalez,R., Dowling,D.P., Bandarian,V.,
            Saleh,L., Correa,I.R. and Weigele,P.R.
  TITLE     Pathways of thymidine hypermodification
  JOURNAL   Nucleic Acids Res 50 (6), 3001-3017 (2022)
   PUBMED   34522950
REFERENCE   2  (residues 1 to 366)
  AUTHORS   Lee,Y.J., Dai,N., Walsh,S.E., Muller,S., Fraser,M.E.,
            Kauffman,K.M., Guan,C., Correa,I.R. Jr. and Weigele,P.R.
  TITLE     Identification and biosynthesis of thymidine hypermodifications in
            the genomic DNA of widespread bacterial viruses
  JOURNAL   Proc Natl Acad Sci U S A 115 (14), E3116-E3125 (2018)
   PUBMED   29555775
REFERENCE   3  (residues 1 to 366)
  AUTHORS   Iyer,L.M., Zhang,D., Burroughs,A.M. and Aravind,L.
  TITLE     Computational identification of novel biochemical systems involved
            in oxidation, glycosylation and other complex modifications of
            bases in DNA
  JOURNAL   Nucleic Acids Res 41 (16), 7635-7655 (2013)
   PUBMED   23814188
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18723.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Sandaracinobacter neustonicus"
                     /db_xref="taxon:1715348"
     Protein         1..366
                     /product="nucleotide kinase domain-containing protein"
                     /calculated_mol_wt=41540
     Region          28..309
                     /region_name="aGPT-Pplase1"
                     /note="alpha-glutamyl/putrescinyl thymine
                     pyrophosphorylase clade 1; pfam18723"
                     /db_xref="CDD:436692"
ORIGIN      
        1 mlefdypaap anvapvivst hlapakttav ydsywrfaae rqrvfyrrvl dtpwpwtqnr
       61 vmaiykftna yrasdrvsqy lirnviyrdd lpnsvdevvf rillfklfnk ietwerlerg
      121 lgpisfadyr fdrydevltt amaaghrvys aayimppgss afgckakhqn hlkllemmma
      181 hrlpeklasa rsmqkgfell reyptigdfl ayqfvtdvny sevtdfsemd fvipgpgard
      241 glrkcfadtg glsdaelirl madrqeqeca rlglefpslw grplqlidcq nlfcevdkya
      301 rvahpeaagl tgrtrikqkf aaqaqpiefw yppkwgindr iaagavpnea feasrpgaan
      361 aqddsa
//
LOCUS       WP_235890385             529 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Sandaracinobacter
            neustonicus].
ACCESSION   WP_235890385
VERSION     WP_235890385.1
KEYWORDS    RefSeq.
SOURCE      Sandaracinobacter neustonicus
  ORGANISM  Sandaracinobacter neustonicus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandaracinobacter.
REFERENCE   1  (residues 1 to 529)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 529)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 529)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Sandaracinobacter neustonicus"
                     /db_xref="taxon:1715348"
     Protein         1..529
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=57200
     Region          11..465
                     /region_name="PRK11561"
                     /note="isovaleryl CoA dehydrogenase; Provisional"
                     /db_xref="CDD:183199"
ORIGIN      
        1 msslkplaql ethevfnqap pmedrnlwld dralqhavak aggaahaprl qalgarvgsa
       61 eviewgfean rqtpvletfd rfghridevr fhpayhqlma lgldsgfasa awtgqpaghv
      121 ahaailflqg qadsgsicpm tmtyaavpal qaepkvarew vpriqagryd gaarpaaeka
      181 gvtigmamte kqggsdvran stkaepvgdd wfrltghkwf csapmcdafl tlaytdaglt
      241 cflvprwlpd gernagfrvm rlkdklgdrs nasseieyhg alaqrlgpeg rgvstiiqmv
      301 qhtrldcvlg saqqmrasla qalwhtahrs afqrrlidqp amagvladla veseastaig
      361 lrlaqafdaq eplarlltpl akywvckrtp gfvyeamecl ggagyiesgp marifrqspl
      421 naiwegsgnv ialdvlraia repegveals ewlkaqagrn agygrfiaal dfsriteata
      481 rlfverlala aqaatllewd npvadafapc gwtgaamlmg rmmppstrg
//
LOCUS       WP_235890590             954 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein [Martelella
            alba].
ACCESSION   WP_235890590
VERSION     WP_235890590.1
KEYWORDS    RefSeq.
SOURCE      Martelella alba
  ORGANISM  Martelella alba
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Martelella.
REFERENCE   1  (residues 1 to 954)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Martelella alba"
                     /db_xref="taxon:2590451"
     Protein         1..954
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=104907
     Region          26..249
                     /region_name="PBP2_BvgS_HisK_like"
                     /note="The type 2 periplasmic ligand-binding protein
                     domain of the sensor-kinase BvgS and histidine kinase
                     receptors, and related proteins; cd01007"
                     /db_xref="CDD:270228"
     Region          276..494
                     /region_name="PBP2_BvgS_HisK_like"
                     /note="The type 2 periplasmic ligand-binding protein
                     domain of the sensor-kinase BvgS and histidine kinase
                     receptors, and related proteins; cd01007"
                     /db_xref="CDD:270228"
     Region          519..735
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Region          <743..951
                     /region_name="GGDEF"
                     /note="GGDEF domain, diguanylate cyclase (c-di-GMP
                     synthetase) or its enzymatically inactive variants [Signal
                     transduction mechanisms]; COG2199"
                     /db_xref="CDD:441801"
ORIGIN      
        1 mpsearlnqp dftdaerdwi aeqeaisigv vadnepysfy rngqimgwsv dvirkiaeis
       61 glefdirmgs wpeiyrqfql gsleaiadis rtedrsgfir ftdpyhlrrt vlfenvdhpi
      121 kdalnietlr hrrigvikdi yyqpalkaag iipveyasyr dlmaavafgw idaalapemt
      181 anffirengf tnvaaggnld iaavaledfr lgvlklpdda drkmlssvld ksvaalssad
      241 lsaiterwls yragrpqrag plkllpeeqa fieqapplki gfisdyepfs flsggrgqgl
      301 avdiaqyiss atglvfepvy dnwakllaaf rrgdidvian msytpdraey tlfsdayhei
      361 pnavflrsgs apykdlhald gevigigrdi yfsdqlksvh pdvrsfetqe alllalshge
      421 idaaimslsn gnaiirrlgl invqiggefe lpgvsredlr fgispkypyl rsiideaiaa
      481 ipvsrwqeme vrwlgppiag mseirtpltp eeerflqekg virvcvdpna apftsidssg
      541 qftgiaadim avlakrghfs fqvvpvsdlg spaedlaktg cdilpfasqh evsagswdft
      601 msyldvptav ageiadpfid slrdlsgrtv gyvpghvpee llqerypgvt lvavanereg
      661 leqlrddrid amlgpldslg feitamqtnd ikisgriaea yeaaiatrsd qpqlgeifsk
      721 llgsldrtel etivnaqrls pfrrvvdfrl liavacgvvl allifflwnr klkslnealn
      781 eanqklqkin vtdgltglfn rahfdeqger dfvlcrgkga afalamidvd hfkpvndrlg
      841 hlagdqclqq laglmqahlg gngtfvaryg geefvaycpg ahdgefealv delrvliaet
      901 aiqldngklh mtisagcycs vpgegddlgg firradlrly aakaggrnrv vrad
//
LOCUS       WP_235890608             279 aa            linear   BCT 02-MAR-2025
DEFINITION  urease accessory protein UreD [Martelella alba].
ACCESSION   WP_235890608
VERSION     WP_235890608.1
KEYWORDS    RefSeq.
SOURCE      Martelella alba
  ORGANISM  Martelella alba
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Martelella.
REFERENCE   1  (residues 1 to 279)
  AUTHORS   Farrugia,M.A., Wang,B., Feig,M. and Hausinger,R.P.
  TITLE     Mutational and Computational Evidence That a Nickel-Transfer Tunnel
            in UreD Is Used for Activation of Klebsiella aerogenes Urease
  JOURNAL   Biochemistry 54 (41), 6392-6401 (2015)
   PUBMED   26401965
REFERENCE   2  (residues 1 to 279)
  AUTHORS   Farrugia,M.A., Macomber,L. and Hausinger,R.P.
  TITLE     Biosynthesis of the urease metallocenter
  JOURNAL   J Biol Chem 288 (19), 13178-13185 (2013)
   PUBMED   23539618
REFERENCE   3  (residues 1 to 279)
  AUTHORS   Moncrief,M.B. and Hausinger,R.P.
  TITLE     Characterization of UreG, identification of a UreD-UreF-UreG
            complex, and evidence suggesting that a nucleotide-binding site in
            UreG is required for in vivo metallocenter assembly of Klebsiella
            aerogenes urease
  JOURNAL   J Bacteriol 179 (13), 4081-4086 (1997)
   PUBMED   9209019
REFERENCE   4  (residues 1 to 279)
  AUTHORS   Neyrolles,O., Ferris,S., Behbahani,N., Montagnier,L. and
            Blanchard,A.
  TITLE     Organization of Ureaplasma urealyticum urease gene cluster and
            expression in a suppressor strain of Escherichia coli
  JOURNAL   J Bacteriol 178 (3), 647-655 (1996)
   PUBMED   8550495
  REMARK    Erratum:[J Bacteriol. 1996 May;178(9):2725. doi:
            10.1128/jb.178.9.2725-2725.1996.. PMID: 8626347]
REFERENCE   5  (residues 1 to 279)
  AUTHORS   Park,I.S., Carr,M.B. and Hausinger,R.P.
  TITLE     In vitro activation of urease apoprotein and role of UreD as a
            chaperone required for nickel metallocenter assembly
  JOURNAL   Proc Natl Acad Sci U S A 91 (8), 3233-3237 (1994)
   PUBMED   7909161
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10002853
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Martelella alba"
                     /db_xref="taxon:2590451"
     Protein         1..279
                     /product="urease accessory protein UreD"
                     /GO_function="GO:0016151 - nickel cation binding [Evidence
                     IEA]"
                     /GO_process="GO:0008152 - metabolic process [Evidence
                     IEA]"
                     /calculated_mol_wt=30408
     Region          8..279
                     /region_name="UreH"
                     /note="Urease accessory protein UreH [Posttranslational
                     modification, protein turnover, chaperones]; COG0829"
                     /db_xref="CDD:440591"
ORIGIN      
        1 meveeqllep vmtprpqrtf gkgelvakla agrtridqly qegaakirlp esfdermeav
       61 lintsggltg gdqlrwvvea rdgtsvtvtt qacekiyrsd sgpamidaei avgenarldw
      121 lpqetilfde aalnrrldvd laetaefvav eavllgrkam geavgmghfr drwrvrrggq
      181 llhaedvrmt gdiehlvaqs ailggevafa tllycgarte allpklrdvl gdagagasaw
      241 ngklvariva adgyalrkll ipalkvlred qimpkvwhl
//
LOCUS       WP_235889676             265 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-dependent peptidase [Flavobacterium profundi].
ACCESSION   WP_235889676
VERSION     WP_235889676.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium profundi
  ORGANISM  Flavobacterium profundi
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 265)
  AUTHORS   Gohler,A.K., Staab,A., Gabor,E., Homann,K., Klang,E., Kosfeld,A.,
            Muus,J.E., Wulftange,J.S. and Jahreis,K.
  TITLE     Characterization of MtfA, a novel regulatory output signal protein
            of the glucose-phosphotransferase system in Escherichia coli K-12
  JOURNAL   J Bacteriol 194 (5), 1024-1035 (2012)
   PUBMED   22178967
REFERENCE   2  (residues 1 to 265)
  AUTHORS   Deutscher,J.
  TITLE     The mechanisms of carbon catabolite repression in bacteria
  JOURNAL   Curr Opin Microbiol 11 (2), 87-93 (2008)
   PUBMED   18359269
REFERENCE   3  (residues 1 to 265)
  AUTHORS   Becker,A.K., Zeppenfeld,T., Staab,A., Seitz,S., Boos,W., Morita,T.,
            Aiba,H., Mahr,K., Titgemeyer,F. and Jahreis,K.
  TITLE     YeeI, a novel protein involved in modulation of the activity of the
            glucose-phosphotransferase system in Escherichia coli K-12
  JOURNAL   J Bacteriol 188 (15), 5439-5449 (2006)
   PUBMED   16855233
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017932.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06167.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Flavobacterium profundi"
                     /db_xref="taxon:1774945"
     Protein         1..265
                     /product="zinc-dependent peptidase"
                     /calculated_mol_wt=31442
     Region          52..261
                     /region_name="Peptidase_M90-like"
                     /note="uncharacterized M90 peptidase family-like proteins;
                     cd20170"
                     /db_xref="CDD:380913"
ORIGIN      
        1 maylllalgi vffivfaynv iiepiyafff rkpiyvhlyl fpkklslpql qilhdqfdfy
       61 qklpplqqky fehrvatfiq nypyigkdgl evtdemkvli aatavmltfg mrnylftvid
      121 kiiiypdvyy stlnqkyhkg efnprmkaiv fswkhflegy eisndnlnlg lhefghvlhy
      181 qglnnsdtsa tifavtyeei ikevkypany skllqsnyfr iyaytnefef iavilehffe
      241 tpeqfkkefp plfekvkvmi nftqy
//
LOCUS       WP_235890311             423 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: phospholipase A [Sandaracinobacter].
ACCESSION   WP_235890311
VERSION     WP_235890311.1
KEYWORDS    RefSeq.
SOURCE      Sandaracinobacter
  ORGANISM  Sandaracinobacter
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae.
REFERENCE   1  (residues 1 to 423)
  AUTHORS   Horrevoets,A.J., Verheij,H.M. and de Haas,G.H.
  TITLE     Inactivation of Escherichia coli outer-membrane phospholipase A by
            the affinity label hexadecanesulfonyl fluoride. Evidence for an
            active-site serine
  JOURNAL   Eur J Biochem 198 (1), 247-253 (1991)
   PUBMED   2040286
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014324.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02253.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Sandaracinobacter"
                     /db_xref="taxon:56358"
     Protein         1..423
                     /product="phospholipase A"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0004620 - phospholipase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=45042
     Region          181..423
                     /region_name="PldA"
                     /note="Outer membrane phospholipase A [Cell
                     wall/membrane/envelope biogenesis]; COG2829"
                     /db_xref="CDD:442077"
     Site            order(212,214,216,218,239,245,251,254,286,288,290,385)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238302"
     Site            order(212,214,241,254)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238302"
     Site            order(286,288,300)
                     /site_type="active"
                     /db_xref="CDD:238302"
     Site            order(293,296,333)
                     /site_type="other"
                     /note="calcium binding site [ion binding]"
                     /db_xref="CDD:238302"
ORIGIN      
        1 msgsialsvl masalasqps apqaaaessl efiiseaaqd tgggsvnvsi rvlnsgaqpk
       61 aislpariqa elqsgshkrq vwlvrraqde atltlpatgf aqahyllpea geplpagsll
      121 sisawsrqqv viaqdllarn evatlsplpt aegfaadapf sdtaqaagsp epvrgvstah
      181 segspflgnl styepmymvy gpssaaeaki qislkyrlfg srqsnglsss wrdgmhfaft
      241 qkmfwdlgad sspfrnidym pelfylsqsa qfangmsvag qagvkhesng rdgsasrsin
      301 mlylapmaai plddgyrlif aprlsfligd ksdnpdilky rgntavfvel gkdeglklas
      361 tarfnfgsgk gslstdisyp ltrllgggpd fylyvqsfig ygenlleynh htarlragla
      421 ivr
//
LOCUS       WP_235890702             120 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6107 family protein [Pararhizobium mangrovi].
ACCESSION   WP_235890702
VERSION     WP_235890702.1
KEYWORDS    RefSeq.
SOURCE      Pararhizobium mangrovi
  ORGANISM  Pararhizobium mangrovi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Pararhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039350.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19602.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Pararhizobium mangrovi"
                     /db_xref="taxon:2590452"
     Protein         1..120
                     /product="DUF6107 family protein"
                     /calculated_mol_wt=12498
     Region          26..118
                     /region_name="DUF6107"
                     /note="Family of unknown function (DUF6107); pfam19602"
                     /db_xref="CDD:437434"
ORIGIN      
        1 msvrlakgvr llagghgsim dlemwiylak iagalagali slvyllphth reassrffig
       61 vvsglvfgga vgtalaerfg ivgmlsapeq mlmgsaaasl sawwvlgals riaqrfgrgw
//
LOCUS       WP_235890799             139 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding oxidoreductase, partial [Pararhizobium mangrovi].
ACCESSION   WP_235890799
VERSION     WP_235890799.1
KEYWORDS    RefSeq.
SOURCE      Pararhizobium mangrovi
  ORGANISM  Pararhizobium mangrovi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Pararhizobium.
REFERENCE   1  (residues 1 to 139)
  AUTHORS   Lu,G., Campbell,W.H., Schneider,G. and Lindqvist,Y.
  TITLE     Crystal structure of the FAD-containing fragment of corn nitrate
            reductase at 2.5 A resolution: relationship to other flavoprotein
            reductases
  JOURNAL   Structure 2 (9), 809-821 (1994)
   PUBMED   7812715
REFERENCE   2  (residues 1 to 139)
  AUTHORS   Hyde,G.E., Crawford,N.M. and Campbell,W.H.
  TITLE     The sequence of squash NADH:nitrate reductase and its relationship
            to the sequences of other flavoprotein oxidoreductases. A family of
            flavoprotein pyridine nucleotide cytochrome reductases
  JOURNAL   J Biol Chem 266 (35), 23542-23547 (1991)
   PUBMED   1748631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013161.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00970.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Pararhizobium mangrovi"
                     /db_xref="taxon:2590452"
     Protein         1..>139
                     /product="FAD-binding oxidoreductase"
     Region          31..>139
                     /region_name="FNR_like"
                     /note="Ferredoxin reductase (FNR), an FAD and NAD(P)
                     binding protein, was intially identified as a chloroplast
                     reductase activity, catalyzing the electron transfer from
                     reduced iron-sulfur protein ferredoxin to NADP+ as the
                     final step in the electron transport...; cl06868"
                     /db_xref="CDD:447143"
     Site            order(60,74..77,90..92,97..100)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99792"
     Site            order(74,76..77)
                     /site_type="other"
                     /note="conserved FAD binding motif [chemical binding]"
                     /db_xref="CDD:99792"
     Site            order(97,100,103,109)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99792"
ORIGIN      
        1 mdygaqsgep tladapatpt faipanvyaq tvtevkhytd rlfkfrmtrp aefrfrsgef
       61 vmiglpnaek pvfraysias pfwddeieff sikvpggplt ehlqkvkagd tvlmrkkptg
      121 tlvldalvpg rrlymlstg
//
LOCUS       WP_235890819             139 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding oxidoreductase, partial [Pararhizobium mangrovi].
ACCESSION   WP_235890819
VERSION     WP_235890819.1
KEYWORDS    RefSeq.
SOURCE      Pararhizobium mangrovi
  ORGANISM  Pararhizobium mangrovi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Pararhizobium.
REFERENCE   1  (residues 1 to 139)
  AUTHORS   Lu,G., Campbell,W.H., Schneider,G. and Lindqvist,Y.
  TITLE     Crystal structure of the FAD-containing fragment of corn nitrate
            reductase at 2.5 A resolution: relationship to other flavoprotein
            reductases
  JOURNAL   Structure 2 (9), 809-821 (1994)
   PUBMED   7812715
REFERENCE   2  (residues 1 to 139)
  AUTHORS   Hyde,G.E., Crawford,N.M. and Campbell,W.H.
  TITLE     The sequence of squash NADH:nitrate reductase and its relationship
            to the sequences of other flavoprotein oxidoreductases. A family of
            flavoprotein pyridine nucleotide cytochrome reductases
  JOURNAL   J Biol Chem 266 (35), 23542-23547 (1991)
   PUBMED   1748631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013161.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00970.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Pararhizobium mangrovi"
                     /db_xref="taxon:2590452"
     Protein         1..>139
                     /product="FAD-binding oxidoreductase"
     Region          31..>139
                     /region_name="FNR_like"
                     /note="Ferredoxin reductase (FNR), an FAD and NAD(P)
                     binding protein, was intially identified as a chloroplast
                     reductase activity, catalyzing the electron transfer from
                     reduced iron-sulfur protein ferredoxin to NADP+ as the
                     final step in the electron transport...; cl06868"
                     /db_xref="CDD:447143"
     Site            order(60,74..77,90..92,97..100)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99792"
     Site            order(74,76..77)
                     /site_type="other"
                     /note="conserved FAD binding motif [chemical binding]"
                     /db_xref="CDD:99792"
     Site            order(97,100,103,109)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99792"
ORIGIN      
        1 mddaasssdt afaekhdtpa pkipanvyaq tvtevkhytd rlfkfrmtrp aefrfrsgef
       61 vmiglpnaek pvfraysias pfwddeieff sikvpggplt ehlqkvkagd tvlmrkkptg
      121 tlvldalvpg rrlymlstg
//
LOCUS       WP_235890865             358 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2497 domain-containing protein [Pararhizobium mangrovi].
ACCESSION   WP_235890865
VERSION     WP_235890865.1
KEYWORDS    RefSeq.
SOURCE      Pararhizobium mangrovi
  ORGANISM  Pararhizobium mangrovi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Pararhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022155.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10691.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Pararhizobium mangrovi"
                     /db_xref="taxon:2590452"
     Protein         1..358
                     /product="DUF2497 domain-containing protein"
                     /calculated_mol_wt=38122
     Region          <44..265
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          288..355
                     /region_name="PopZ"
                     /note="Cell pole-organizing protein PopZ [Cell cycle
                     control, cell division, chromosome partitioning]; COG3827"
                     /db_xref="CDD:443039"
ORIGIN      
        1 maqpnanrep tmeeilasir riiesnesgi adrsdgtfge pfaesrdral saeegaadrs
       61 eprapaagna ldpspmashg egrfavhsgg ntaepvslad vasrareara deaqapqarr
      121 gseaptapls fgnaalrlds vfeadaqdma malgqteadd epstdldrts eanawqvddd
      181 eaadmedvws pehgapande lstafdarsp eteaevpfve pdrdephgte pigedveeav
      241 asataepasa khddtapadg atdddgvfdd aratvegdrs assatamqlt saatgekvaa
      301 sfddltrmma aesrrsfdei aeemlrpmlr ewlddnlptl verlvreeie rvargtrr
//
LOCUS       WP_235890881             310 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Pararhizobium
            mangrovi].
ACCESSION   WP_235890881
VERSION     WP_235890881.1
KEYWORDS    RefSeq.
SOURCE      Pararhizobium mangrovi
  ORGANISM  Pararhizobium mangrovi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Pararhizobium.
REFERENCE   1  (residues 1 to 310)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Pararhizobium mangrovi"
                     /db_xref="taxon:2590452"
     Protein         1..310
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=34488
     Region          6..>192
                     /region_name="PRK09791"
                     /note="LysR family transcriptional regulator"
                     /db_xref="CDD:182077"
     Region          100..298
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(115..116,118..119,122,126,128..134,228..233,
                     239..240,242..243)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176102"
ORIGIN      
        1 makdgpqslt lrqfryfslv aetgsisraa mrvgisqsai taaiqsleee mgsplfarhq
       61 kgmrlthegh rllrhsrlil aavadarntv rlrpenvage lnigvtrmvs gyyladllar
      121 frrvfqniav rvveddrayl ehllvggeid vgllvvsnlv dhqglqseil lrspfrvwlp
      181 erhallthss lefdhlanep fvmltmdela dttarlwrdg ggfhppvamk sdsveairsl
      241 vgtgvgiaml pdvayrpfsl egdriearyl tgavhtvdig lawrrgmplg epvrhfiels
      301 rdygqgrprr
//
LOCUS       WP_235890920             311 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Martelella alba].
ACCESSION   WP_235890920
VERSION     WP_235890920.1
KEYWORDS    RefSeq.
SOURCE      Martelella alba
  ORGANISM  Martelella alba
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Martelella.
REFERENCE   1  (residues 1 to 311)
  AUTHORS   Woodson,K. and Devine,K.M.
  TITLE     Analysis of a ribose transport operon from Bacillus subtilis
  JOURNAL   Microbiology (Reading) 140 (Pt 8), 1829-1838 (1994)
   PUBMED   7921236
REFERENCE   2  (residues 1 to 311)
  AUTHORS   Hogg,R.W., Voelker,C. and Von Carlowitz,I.
  TITLE     Nucleotide sequence and analysis of the mgl operon of Escherichia
            coli K12
  JOURNAL   Mol Gen Genet 229 (3), 453-459 (1991)
   PUBMED   1719366
REFERENCE   3  (residues 1 to 311)
  AUTHORS   Adams,M.D., Wagner,L.M., Graddis,T.J., Landick,R., Antonucci,T.K.,
            Gibson,A.L. and Oxender,D.L.
  TITLE     Nucleotide sequence and genetic characterization reveal six
            essential genes for the LIV-I and LS transport systems of
            Escherichia coli
  JOURNAL   J Biol Chem 265 (20), 11436-11443 (1990)
   PUBMED   2195019
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014684.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02653.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Martelella alba"
                     /db_xref="taxon:2590451"
     Protein         1..311
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=32049
     Region          4..311
                     /region_name="COG4158"
                     /note="Predicted ABC-type sugar transport system, permease
                     component [General function prediction only]"
                     /db_xref="CDD:443324"
ORIGIN      
        1 mwgkartimq sigmlpvlvl laigfqllsg rfmsvsnlsi vmqqasintv laagmtfvil
       61 tggidlsvgs alamsamlav ivsmvpdygm lgivaglgcg lacglfnggl istlklppfi
      121 vtlgtltafr gmarlighdk tmfnadlpfa aigngslfgv pwlviialav ivlswiilsr
      181 tvlgtwiyav ggneeaarlt giktwkvllf vygasgllag lggvmssarl yaanglqlgq
      241 syeldaiaav ilggtsfvgg vgsiwgtlvg aliiavlsng lilvgvsdiw qyiikglvii
      301 gavaldryra k
//
LOCUS       WP_235890923             528 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Martelella alba].
ACCESSION   WP_235890923
VERSION     WP_235890923.1
KEYWORDS    RefSeq.
SOURCE      Martelella alba
  ORGANISM  Martelella alba
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Martelella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Martelella alba"
                     /db_xref="taxon:2590451"
     Protein         1..528
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=59806
     Region          33..512
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mmkrrtfvtl silaplgatl plggiaarae eerpdftfav dnlwptldpv igisttggrv
       61 ygnvfdtlir rdydkdpegn eivpwlaesw erttptvwtv hlrkgvkfqn gdemtaedva
      121 fslsaerlwg dqplaprgkn yargivrvda iddytveiet efpdstfinr mttpigyvlp
      181 kkyyekvgtd afgqkpigtg pymvtdfdps dhattvafdd ywagkpplkg vtfkivpeys
      241 trlaglaagd ydmivsipvd qmdqvrsmsg velivtqign ypmaafntlt idgmddnpla
      301 dpnlrkamvm avdrpaitka lwgdltftpa pfdfpeygpy ydpdrkpeyg ydpdrakefl
      361 aktsykgepl iwnivrgfyp nyeeaaeymv emwrdlginv elnvvdnfsl aykrpfhlln
      421 msmsseftgd pyrplwldwg psssrvtash rtwvpseafl kdgetfergq tfeekdkayl
      481 dlvkdwedvt pgmylwrnvq sfaisdkyew npgtsqltif dntfmkvn
//
LOCUS       WP_235890928             275 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Martelella alba].
ACCESSION   WP_235890928
VERSION     WP_235890928.1
KEYWORDS    RefSeq.
SOURCE      Martelella alba
  ORGANISM  Martelella alba
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Martelella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00528.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Martelella alba"
                     /db_xref="taxon:2590451"
     Protein         1..275
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=29457
     Region          25..273
                     /region_name="TM_PBP2"
                     /note="Transmembrane subunit (TM) found in Periplasmic
                     Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
                     transporters which generally bind type 2 PBPs. These types
                     of transporters consist of a PBP, two TMs, and two
                     cytoplasmic ABC ATPase subunits, and...; cl00427"
                     /db_xref="CDD:444901"
     Site            order(122..136,213..218)
                     /site_type="active"
                     /note="conserved gate region [active]"
                     /db_xref="CDD:119394"
     Site            order(172..184,190..191,195)
                     /site_type="active"
                     /note="ABC-ATPase subunit interface [active]"
                     /db_xref="CDD:119394"
ORIGIN      
        1 mfarlakgka tkpgetygvp ghgdtlllsi ativfliavw wlvtamgwvk plfvpspgai
       61 vakfistlqn gytgtplyvh vaistarvfs afllacligi plglamgmsp lirgifdppi
      121 efyrpippla ylplmiiwfg igetskvlli flsvfapval garsgvksaa ieqihaaysf
      181 gasrwkvmlh vilpsampei ltamrigigf gwttlvaaem vaatkgigym vlsasqflqt
      241 savimgiiii aaiayafdml mrfierkvvp wkgka
//
LOCUS       WP_235890714             126 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Martelella alba].
ACCESSION   WP_235890714
VERSION     WP_235890714.1
KEYWORDS    RefSeq.
SOURCE      Martelella alba
  ORGANISM  Martelella alba
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Martelella.
REFERENCE   1  (residues 1 to 126)
  AUTHORS   Fujikawa,N., Kurumizaka,H., Nureki,O., Terada,T., Shirouzu,M.,
            Katayama,T. and Yokoyama,S.
  TITLE     Structural basis of replication origin recognition by the DnaA
            protein
  JOURNAL   Nucleic Acids Res 31 (8), 2077-2086 (2003)
   PUBMED   12682358
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019903.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08299.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Martelella alba"
                     /db_xref="taxon:2590451"
     Protein         1..126
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /GO_process="GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /calculated_mol_wt=13645
     Region          24..113
                     /region_name="Bac_DnaA_C"
                     /note="C-terminal domain of bacterial DnaA proteins. The
                     DNA-binding C-terminal domain of DnaA contains a
                     helix-turn-helix motif that specifically interacts with
                     the DnaA box, a 9-mer motif that occurs repetitively in
                     the replication origin oriC. Multiple...; cl07055"
                     /db_xref="CDD:471583"
     Site            order(57..58,65,71..73,81..85,88,91..92)
                     /site_type="other"
                     /note="DnaA box-binding interface [nucleotide binding]"
                     /db_xref="CDD:119330"
ORIGIN      
        1 manisdrsga varslkldgd alslcrvvrl ltfemgqmga lpvgeerlqr rggahlrqma
       61 myvchvalgl slneigqgfg rdrttvayac rvvedrrdda dydafvarie rlaieivvtl
      121 glgdhg
//
LOCUS       WP_235891075             543 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Pararhizobium mangrovi].
ACCESSION   WP_235891075
VERSION     WP_235891075.1
KEYWORDS    RefSeq.
SOURCE      Pararhizobium mangrovi
  ORGANISM  Pararhizobium mangrovi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Pararhizobium.
REFERENCE   1  (residues 1 to 543)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 543)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 543)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Pararhizobium mangrovi"
                     /db_xref="taxon:2590452"
     Protein         1..543
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=58014
     Region          14..435
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(134,175,177,209,211,417..419,421,423)
                     /site_type="active"
                     /db_xref="CDD:173843"
ORIGIN      
        1 mvnqprlyag vnayrldpll tdvtadmpks lregfdaigr fttsvegqdl armanrsape
       61 lraldarger tdqveyhpay halmrrsvaa glhcsvwenv pdeagishqa ravrffltag
      121 lerghlaais ttaasvaaia asprvakdwa prvltrryds atkpamrkqg vtigmamter
      181 qggsdvegca stasrvgegi yrltgekwfv gapmsdafvt lgrteegvsc flvprvledg
      241 aangielrrl kdmsgtrsna cvemglsqsy gfllgtagtg vrtildmvtl trldcalvsa
      301 glmraalgea vfhvrrrtvs gnplaerpim trvladlsld taaatalslr larsfdrare
      361 sreeaayarl mtpvtkywvc ksapgfvsea meciggsgyv edrpiarhyr dapasglweg
      421 tgnamaldvl rvlgrgrell dsvvagighd lgpagartvd vlraaialaq edegaarmlt
      481 eqlalaaaaa elnrlgaahi adafaetrla gswrstygml dsrfdaaril evlcpdadad
      541 agr
//
LOCUS       WP_235891119             137 aa            linear   BCT 02-MAR-2025
DEFINITION  FixH family protein [Sphingobacterium lumbrici].
ACCESSION   WP_235891119
VERSION     WP_235891119.1
KEYWORDS    RefSeq.
SOURCE      Sphingobacterium lumbrici
  ORGANISM  Sphingobacterium lumbrici
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.
REFERENCE   1  (residues 1 to 137)
  AUTHORS   Kahn,D., David,M., Domergue,O., Daveran,M.L., Ghai,J., Hirsch,P.R.
            and Batut,J.
  TITLE     Rhizobium meliloti fixGHI sequence predicts involvement of a
            specific cation pump in symbiotic nitrogen fixation
  JOURNAL   J Bacteriol 171 (2), 929-939 (1989)
   PUBMED   2536685
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017559.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05751.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Sphingobacterium lumbrici"
                     /db_xref="taxon:2559600"
     Protein         1..137
                     /product="FixH family protein"
                     /calculated_mol_wt=15532
     Region          2..128
                     /region_name="FixH"
                     /note="cl46415"
                     /db_xref="CDD:480755"
ORIGIN      
        1 mkivlglatf mlfiiaagvy mvtkdtdslv eedyyeqsln ydqvynrkqn llddraapai
       61 qlnsdtlvii ftqesnrgtl rfqrnsdgsl dkkipfyttn nifklptasf ekgnwnleis
      121 wdangkgyia nqslnmq
//
LOCUS       WP_235890800             462 aa            linear   BCT 02-MAR-2025
DEFINITION  malonyl-CoA decarboxylase domain-containing protein [Pararhizobium
            mangrovi].
ACCESSION   WP_235890800
VERSION     WP_235890800.1
KEYWORDS    RefSeq.
SOURCE      Pararhizobium mangrovi
  ORGANISM  Pararhizobium mangrovi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Pararhizobium.
REFERENCE   1  (residues 1 to 462)
  AUTHORS   Park,H., Kaushik,V.K., Constant,S., Prentki,M., Przybytkowski,E.,
            Ruderman,N.B. and Saha,A.K.
  TITLE     Coordinate regulation of malonyl-CoA decarboxylase,
            sn-glycerol-3-phosphate acyltransferase, and acetyl-CoA carboxylase
            by AMP-activated protein kinase in rat tissues in response to
            exercise
  JOURNAL   J Biol Chem 277 (36), 32571-32577 (2002)
   PUBMED   12065578
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017135.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05292.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Pararhizobium mangrovi"
                     /db_xref="taxon:2590452"
     Protein         1..462
                     /product="malonyl-CoA decarboxylase domain-containing
                     protein"
                     /GO_function="GO:0050080 - malonyl-CoA decarboxylase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=51314
     Region          105..178
                     /region_name="MCD_N"
                     /note="Malonyl-CoA decarboxylase N-terminal domain;
                     pfam17408"
                     /db_xref="CDD:465421"
     Region          181..424
                     /region_name="MCD"
                     /note="Malonyl-CoA decarboxylase C-terminal domain;
                     pfam05292"
                     /db_xref="CDD:461613"
ORIGIN      
        1 mndmsagkni dkspkgflfs elltsiaerg mslidtrryr regdtvesll klcgllltsk
       61 geasgiamar ealalyrkld eaqksaffsg vlerlegdld kaitaaanfv dapsytslav
      121 lntatrprcs vllerlnqap ggtlslvrmr edlldamasd pglaaldwqf vklfsawfnr
      181 gflelrridw napadlleki mryeavhrld swdelrrril pedrclygff hprlegepli
      241 fvevaltdav pesigtiler ereelsadqa ttavfysisn cqrglrgipl gsflikqvvt
      301 dlksrfarlk tfvtlsplpa yaewlkarhe agelampaac pdwdtfraal ddpasdqnae
      361 arrfvestaa yflskarnds grivdpvarf hlgngasler vnvladpspe akanalgtmv
      421 nylyafnrie enhekfvnsg tistsqrisr lanaapmvhd sr
//
LOCUS       WP_235891132              94 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6364 family protein [Sphingobacterium lumbrici].
ACCESSION   WP_235891132
VERSION     WP_235891132.1
KEYWORDS    RefSeq.
SOURCE      Sphingobacterium lumbrici
  ORGANISM  Sphingobacterium lumbrici
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039417.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19891.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Sphingobacterium lumbrici"
                     /db_xref="taxon:2559600"
     Protein         1..94
                     /product="DUF6364 family protein"
                     /calculated_mol_wt=10740
     Region          11..94
                     /region_name="DUF6364"
                     /note="Family of unknown function (DUF6364); pfam19891"
                     /db_xref="CDD:466224"
ORIGIN      
        1 mklipkgeyi mdakitlsfd eqvikeakaf atkngvslsr ltefiykqit sdnyksldel
       61 pisdwintia eegieytktp srkrlksefy nakk
//
LOCUS       WP_235891222             471 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3863 domain-containing protein [Sphingobacterium lumbrici].
ACCESSION   WP_235891222
VERSION     WP_235891222.1
KEYWORDS    RefSeq.
SOURCE      Sphingobacterium lumbrici
  ORGANISM  Sphingobacterium lumbrici
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024381.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12979.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Sphingobacterium lumbrici"
                     /db_xref="taxon:2559600"
     Protein         1..471
                     /product="DUF3863 domain-containing protein"
                     /calculated_mol_wt=53731
     Region          34..387
                     /region_name="DUF3863"
                     /note="Domain of Unknown Function with PDB structure
                     (DUF3863); pfam12979"
                     /db_xref="CDD:432915"
     Region          392..470
                     /region_name="DUF3864"
                     /note="Domain of Unknown Function with PDB structure
                     (DUF3864); pfam12980"
                     /db_xref="CDD:289731"
ORIGIN      
        1 mnsllasagl massvgnnll aaneplpfls vqplmggrfv tlcimirttp wevsrdvkll
       61 pddesaihtl dvvrsmreaf aknnpngrlt wgftlnaled kranyvdirk yvvecqkkyg
      121 devtyfpgyf pgmylprqrv nqeitealri itnfvgrgyr pkciiggfms aeslrylaev
      181 ekihvahgvi wsqhavdagg adgspsypyy pskehyckpa qskadfidcv nldgwsvdfl
      241 cakvsggmag ttpfnavssr rgvgpiesyc elglemghys vmhtqslhfd rgfelngfgw
      301 ipniweaslv kaperkdrgd kfimqamekw vvdtkqrwpd vqfitfgeyg eiwrkqypnn
      361 dkwnyrfeek glgignsyan eeirwfmnks frlallrnwh kntpemvidf trydlpasep
      421 adpspehpvk dwslmnrinq kglrpqdvpv slkdlneedr qliakyypel f
//
LOCUS       WP_235891234             423 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Acinetobacter baumannii].
ACCESSION   WP_235891234
VERSION     WP_235891234.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 423)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..423
                     /product="AMP-binding protein"
     Region          <1..423
                     /region_name="PRK08162"
                     /note="acyl-CoA synthetase; Validated"
                     /db_xref="CDD:236169"
ORIGIN      
        1 lvdpefvnla realslipnq hiividvade eyegenqflg sfeyeewlaq gdanfewqlp
       61 edewdaisln ytsgttgnpk gvvyhhrgay lnaasnilac gmkpravylw tlplfhcngw
      121 cfawsiaasg gtniclrkvd pelvmqliak hkvdyfcgap ivlsmiinlp kekqpsiehh
      181 vevmvagaap pvaviegmrn iginvnhvyg ltetygpsal casqagwsdl siteqaqlhs
      241 rqgvpyplqd smrvldpetm qpvpndgetm geimfrgniv mkgylknpka teeafaggwf
      301 htgdlavchp dgyakitdrs kdiiisggen isslevedvl ykhpavltaa vvakpderwq
      361 evpcafielk tgasvtpeei iehcqkelar fkvpkdvvit eipktstgkl qkfilrewak
      421 era
//
LOCUS       WP_235891256             323 aa            linear   BCT 02-MAR-2025
DEFINITION  fimbrial protein [Klebsiella pasteurii].
ACCESSION   WP_235891256
VERSION     WP_235891256.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pasteurii
  ORGANISM  Klebsiella pasteurii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012635.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00419.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Klebsiella pasteurii"
                     /db_xref="taxon:2587529"
     Protein         1..323
                     /product="fimbrial protein"
                     /GO_component="GO:0009289 - pilus [Evidence IEA]"
                     /GO_process="GO:0007155 - cell adhesion [Evidence IEA]"
                     /calculated_mol_wt=33903
     Region          1..323
                     /region_name="Fimbrial"
                     /note="Fimbrial protein; cl01416"
                     /db_xref="CDD:445401"
ORIGIN      
        1 mlstaasaae cyatagqksy nfdmnyllad psqnsagrvi nnayqwnlsg nynvtcscsg
       61 sytgayitak vpdtgqvysd gnlnyyaine ylavasevfi ggnyqalkat pftsvsnqni
      121 svscdkypyg tgargtisly frrpfvgvqs ipltkvvdvy iasdattqas tpvstvwmsg
      181 tvtvpqscmi ngggvitvpl gsimsgdiat kgemaknftp knvnfdvact nisegvkvsl
      241 sfqgapdand ptafsttnnd vgvriqnpsg ntivpqggel pltmdyssqv gtssislfpi
      301 nttgkepetg dftatatira eiq
//
LOCUS       WP_235891267             989 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: response regulator [Klebsiella].
ACCESSION   WP_235891267
VERSION     WP_235891267.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella
  ORGANISM  Klebsiella
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae.
REFERENCE   1  (residues 1 to 989)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..989
                     /organism="Klebsiella"
                     /db_xref="taxon:570"
     Protein         1..989
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=110052
     Region          1..987
                     /region_name="PRK09959"
                     /note="acid-sensing system histidine kinase EvgS"
                     /db_xref="CDD:182169"
ORIGIN      
        1 mqttltgryr gmnadyltli hyslniritv lgyqnradai ralrageidt vltgldtrps
       61 veegiqlsas lvhswpglvt slvnvmaplh spqstrvavv egypdadfih qafpnaeian
      121 yanyqealss vaygqnawfm gdslttstwl sqefslalst vkfwsspqkt shflflpaqa
      181 rlrkiinsti saidenlhgq iaqstidkgn lsflleplnl tsrekqwlks hktlrviinp
      241 wfapytmads nqeirgvigd ilnliglqtg mqfetvvvks nedmisemkk gnwhivqaat
      301 ydlsrendls fthpfittqf vivvrkedaq etalqpgtrv aisadhtllm kmktrhpnih
      361 weevenssva lnlvatgkvd aaisnqltar ylsehyypdq lawlplaeaq paaisfgvpr
      421 sepelrqild kalddipqke vlqivskwir lpdvridtwe lynrpfylva alaallvvsa
      481 llwvaylalq vrrrkasqrl lemeknkaqk aneekrefls ymsheirtpv saivgflell
      541 qqstthltpa dkasvehaam asrsllklig eildlekies glqevvvkwv htdalireki
      601 llftalaaqk gialcyeshl epkeamqldp qllgqvltnv ignavkftrd grvqvsarkr
      661 drtltisvsd tgpgigseeq kslfmpfsqg nvgelhrgsg lglaisralm qqmggtidlh
      721 selnrgtrvv lslpvqtsyd aipesvatep sssvidralr vliaddhpss rlllkrqlan
      781 lgiaadeagn geealrylqq dhydlvitdl nmpvmdgitl trqvrgfdsk lpiwgltata
      841 qqherercla agmtgclfkp itlaqisrll aevsetsraa fdekrlavla qgnrslmlta
      901 lrdaqrenrr dleaarvaar eenypsvkhh ihrlngtaql lganelvnia qrledrlpda
      961 isttelinvl dqiesslnkl eqsiecfqs
//
LOCUS       WP_235891304             267 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6708 domain-containing protein [Pseudomonas].
ACCESSION   WP_235891304
VERSION     WP_235891304.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042867.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20455.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..267
                     /product="DUF6708 domain-containing protein"
                     /calculated_mol_wt=30923
     Region          106..265
                     /region_name="DUF6708"
                     /note="Family of unknown function (DUF6708); pfam20455"
                     /db_xref="CDD:466604"
ORIGIN      
        1 mkikprilse ralcwsydlp gvssdevprs sfedidpppn ycddvflelp rstvslrgva
       61 vliggpilvf svgaliymhw sffgiywsnn wgvdilssla iligmwatat yvkmdlllpr
      121 depirfnrlr rkiylyqfrf hyiylfsrkh wgvkpvaynw ddvtaevyrv yapghgglie
      181 nvmlsvrnpe tnevidrvff thdlyhgeay waiarlfmqq gpealpkfvh pprdwndddg
      241 lshmhclapk vhwpedmdre srtapsd
//
LOCUS       WP_235891328              78 aa            linear   BCT 02-MAR-2025
DEFINITION  Rep family protein, partial [Pseudomonas shirazica].
ACCESSION   WP_235891328
VERSION     WP_235891328.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas shirazica
  ORGANISM  Pseudomonas shirazica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 78)
  AUTHORS   Machon,C., Ruiz-Maso,J.A., Amodio,J., Boer,D.R.,
            Bordanaba-Ruiseco,L., Bury,K., Konieczny,I., Del Solar,G. and
            Coll,M.
  TITLE     Structures of pMV158 replication initiator RepB with and without
            DNA reveal a flexible dual-function protein
  JOURNAL   Nucleic Acids Res 51 (3), 1458-1472 (2023)
   PUBMED   36688326
REFERENCE   2  (residues 1 to 78)
  AUTHORS   Boer,D.R., Ruiz-Maso,J.A., Rueda,M., Petoukhov,M.V., Machon,C.,
            Svergun,D.I., Orozco,M., del Solar,G. and Coll,M.
  TITLE     Conformational plasticity of RepB, the replication initiator
            protein of promiscuous streptococcal plasmid pMV158
  JOURNAL   Sci Rep 6, 20915 (2016)
   PUBMED   26875695
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 78)
  AUTHORS   Xu,F.F., Pearce,L.E. and Yu,P.L.
  TITLE     Genetic analysis of a lactococcal plasmid replicon
  JOURNAL   Mol Gen Genet 227 (1), 33-39 (1991)
   PUBMED   1904536
REFERENCE   4  (residues 1 to 78)
  AUTHORS   Bates,E.E. and Gilbert,H.J.
  TITLE     Characterization of a cryptic plasmid from Lactobacillus plantarum
  JOURNAL   Gene 85 (1), 253-258 (1989)
   PUBMED   2695401
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013849.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01719.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Pseudomonas shirazica"
                     /db_xref="taxon:1940636"
     Protein         1..>78
                     /product="Rep family protein"
                     /GO_component="GO:0005727 - extrachromosomal circular DNA
                     [Evidence IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
     Region          7..>73
                     /region_name="Rep_2"
                     /note="Plasmid replication protein; pfam01719"
                     /db_xref="CDD:396331"
ORIGIN      
        1 mkaienkder trnwtfvvyp esapkdwrss ldglhvpwve splhdkdvnp dgeikkahwh
       61 iamffnskks yqqmcdit
//
LOCUS       WP_235891329              80 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Pseudomonas shirazica].
ACCESSION   WP_235891329
VERSION     WP_235891329.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas shirazica
  ORGANISM  Pseudomonas shirazica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 80)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Pseudomonas shirazica"
                     /db_xref="taxon:1940636"
     Protein         <1..>80
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          23..>80
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 vaeaygsiea ellrldagei rgtlrvrsip sflakwltpr lprfqqrypd ielrlvaeds
       61 aqaltpgdfd laidlndgsy
//
LOCUS       WP_235891390             639 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Thalassobius litoralis].
ACCESSION   WP_235891390
VERSION     WP_235891390.1
KEYWORDS    RefSeq.
SOURCE      Thalassobius litoralis
  ORGANISM  Thalassobius litoralis
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
            Roseobacteraceae; Thalassobius.
REFERENCE   1  (residues 1 to 639)
  AUTHORS   Zhang,Y.L., Arakawa,E. and Leung,K.Y.
  TITLE     Novel Aeromonas hydrophila PPD134/91 genes involved in O-antigen
            and capsule biosynthesis
  JOURNAL   Infect Immun 70 (5), 2326-2335 (2002)
   PUBMED   11953367
  REMARK    Erratum:[Infect Immun 2002 Jun;70(6):3308]
REFERENCE   2  (residues 1 to 639)
  AUTHORS   Swartley,J.S., Liu,L.J., Miller,Y.K., Martin,L.E., Edupuganti,S.
            and Stephens,D.S.
  TITLE     Characterization of the gene cassette required for biosynthesis of
            the (alpha1-->6)-linked N-acetyl-D-mannosamine-1-phosphate capsule
            of serogroup A Neisseria meningitidis
  JOURNAL   J Bacteriol 180 (6), 1533-1539 (1998)
   PUBMED   9515923
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025025.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13641.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Thalassobius litoralis"
                     /db_xref="taxon:1010611"
     Protein         1..639
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=71232
     Region          17..>159
                     /region_name="PulE"
                     /note="Type II secretory pathway ATPase GspE/PulE or T4P
                     pilus assembly pathway ATPase PilB [Cell motility,
                     Intracellular trafficking, secretion, and vesicular
                     transport, Extracellular structures]; COG2804"
                     /db_xref="CDD:442055"
     Region          252..492
                     /region_name="CESA_like_2"
                     /note="CESA_like_2 is a member of the cellulose synthase
                     superfamily; cd06427"
                     /db_xref="CDD:133049"
     Site            343..345
                     /site_type="active"
                     /note="DXD motif [active]"
                     /db_xref="CDD:133049"
     Region          <383..>614
                     /region_name="nfrB"
                     /note="glycosyl transferase family protein; PRK15489"
                     /db_xref="CDD:237974"
ORIGIN      
        1 msvlplvpdp ppqqrafgqy lmdqgvlssa qmlranmela rndtsleevl iaqglatpye
       61 ladhsagwfq aarvsartlt pdpmllaqvg aqtclklail plwhhdgita vatarpnhlp
      121 riatmlpkaw griqpaiate seiqtalafy arteltldas srvplsescr swdhhshlrl
      181 pltllgilgl lvvalaypvg lfsvltgwaa ftmlvasamk laafltylgd qptdtdpptl
      241 pvslsrpeak rprisilvpl fretevarhl lqrlsqltyp kslldvvlvl eetdtltraa
      301 ldrailphwm rvvvvpdgqp rtkpramnya ldfcrgdiig ifdaedapda dqldkvaarf
      361 mqapddlvcl qgvldyynsr qnwlarcfti eyaswfrvvm pgmarlgfai plggttlyfr
      421 raalehlggw dahnvtedad lgfrlarhgy rtemlhtttr eeanchvvpw ikqrsrwlkg
      481 ymvtylvhmr rpaqlyrqlg awkflgfqah fvtalsqfll apllwsfwli llgvphplvg
      541 lvpddmlrmm gamffavelc tmmigltavs gpghrhlmgw vptihfyypl gvlaaykaly
      601 elifapfywd ktqhglslda tespsgggsv qfqpghesl
//
LOCUS       WP_235891395             271 aa            linear   BCT 02-MAR-2025
DEFINITION  5-formyltetrahydrofolate cyclo-ligase [Thalassobius litoralis].
ACCESSION   WP_235891395
VERSION     WP_235891395.1
KEYWORDS    RefSeq.
SOURCE      Thalassobius litoralis
  ORGANISM  Thalassobius litoralis
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
            Roseobacteraceae; Thalassobius.
REFERENCE   1  (residues 1 to 271)
  AUTHORS   Dayan,A., Bertrand,R., Beauchemin,M., Chahla,D., Mamo,A.,
            Filion,M., Skup,D., Massie,B. and Jolivet,J.
  TITLE     Cloning and characterization of the human
            5,10-methenyltetrahydrofolate synthetase-encoding cDNA
  JOURNAL   Gene 165 (2), 307-311 (1995)
   PUBMED   8522195
REFERENCE   2  (residues 1 to 271)
  AUTHORS   Maras,B., Stover,P., Valiante,S., Barra,D. and Schirch,V.
  TITLE     Primary structure and tetrahydropteroylglutamate binding site of
            rabbit liver cytosolic 5,10-methenyltetrahydrofolate synthetase
  JOURNAL   J Biol Chem 269 (28), 18429-18433 (1994)
   PUBMED   8034591
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013934.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01812.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Thalassobius litoralis"
                     /db_xref="taxon:1010611"
     Protein         1..271
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /calculated_mol_wt=29588
     Region          28..226
                     /region_name="5-FTHF_cyc-lig"
                     /note="5-formyltetrahydrofolate cyclo-ligase family;
                     cl00360"
                     /db_xref="CDD:444864"
ORIGIN      
        1 mthstmqstl vateseksgr wagrnadkdr lrqeiwqgle dsrmnvgpvw srisnwvgad
       61 maakllseld iwkqaqvvkc npdppqipvr lralydgkiv lmpvpefgtg dlpwvllapk
      121 elerqgvqfe laatsvgavq vgrklsfedl pkidlavcgc vavtraggrt gkgggfadle
      181 lglfrdleki dattpivttv hssmvvddar lpvmahdsll nwivtesdvi ettpsgpqpg
      241 gvnwdlvlpd qlediwflkd lkdkilarka g
//
LOCUS       WP_235891443             267 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease [Thalassobius litoralis].
ACCESSION   WP_235891443
VERSION     WP_235891443.1
KEYWORDS    RefSeq.
SOURCE      Thalassobius litoralis
  ORGANISM  Thalassobius litoralis
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
            Roseobacteraceae; Thalassobius.
REFERENCE   1  (residues 1 to 267)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01061.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Thalassobius litoralis"
                     /db_xref="taxon:1010611"
     Protein         1..267
                     /product="ABC transporter permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=28337
     Region          14..267
                     /region_name="ABC2_membrane"
                     /note="ABC-2 type transporter; cl21474"
                     /db_xref="CDD:473876"
ORIGIN      
        1 meqgfqmgtr rfgrvnwlgm ytlmrreimr fvavwtqtll aplataalfl mifsiaigkt
       61 rgevmgvpft hfiapgilmm tviqnafant sssiviskvq gnivdtlmpp lsplelvlgy
      121 laggiargiv valaisiglf aflglgvahp vwalvfvvlg sgllgaigvv agifankfdq
      181 maaitnfivt plaflsgtfy svqalpagir eithfnpify lidgvrygvl gvsdsspwlg
      241 lavaggtmla vsgaawamfr sgyrlka
//
LOCUS       WP_235891482             331 aa            linear   BCT 02-MAR-2025
DEFINITION  arginase family protein [Thalassobius litoralis].
ACCESSION   WP_235891482
VERSION     WP_235891482.1
KEYWORDS    RefSeq.
SOURCE      Thalassobius litoralis
  ORGANISM  Thalassobius litoralis
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
            Roseobacteraceae; Thalassobius.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00491.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Thalassobius litoralis"
                     /db_xref="taxon:1010611"
     Protein         1..331
                     /product="arginase family protein"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=34099
     Region          51..324
                     /region_name="Arginase_HDAC"
                     /note="Arginase-like and histone-like hydrolases; cl17011"
                     /db_xref="CDD:450134"
     Site            order(146,168,170,172,255,257,300)
                     /site_type="active"
                     /db_xref="CDD:212513"
     Site            order(168,170,257)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:212513"
ORIGIN      
        1 mpaygvncgq vavvaqckgm kmadlakmfg ahgaggflgf pvrssakgaq iavigagsat
       61 pydsvgaycm dgpaairagv adytanahhm nfdlmgpvlp pdvaavdlgd lpvraddsaa
      121 arrlirdtvv dvldagavpv llggddslpt pmleafegrg plvilqidah idwrdevdge
      181 rlglsstmrr asemahvqri vqvgargigs arvsdyedak hwgaqfvtgv evsrngvqra
      241 idlipegsdv vicfdcdald psvmpaviap taggltyaqa lelieavaak ariaafdlve
      301 fmpaadingl gartagqlaa avvgliarqa r
//
LOCUS       WP_235891585             117 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase [Klebsiella spallanzanii].
ACCESSION   WP_235891585
VERSION     WP_235891585.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella spallanzanii
  ORGANISM  Klebsiella spallanzanii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (residues 1 to 117)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Klebsiella spallanzanii"
                     /db_xref="taxon:2587528"
     Protein         1..117
                     /product="PfkB family carbohydrate kinase"
                     /calculated_mol_wt=12234
     Region          <1..109
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
     Site            order(28,55,58..59,62)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238177"
ORIGIN      
        1 mawfgepgde hqvinhwltl gpkltvvtrg aegadawtad fhihvpgidv vvadtvgagd
       61 tvnagilasl staglleksk lvtlsrnqvr havelgmraa avtvsrpgan ppwdhel
//
LOCUS       WP_235891403             198 aa            linear   BCT 02-MAR-2025
DEFINITION  histidine phosphotransferase family protein [Thalassobius
            litoralis].
ACCESSION   WP_235891403
VERSION     WP_235891403.1
KEYWORDS    RefSeq.
SOURCE      Thalassobius litoralis
  ORGANISM  Thalassobius litoralis
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
            Roseobacteraceae; Thalassobius.
REFERENCE   1  (residues 1 to 198)
  AUTHORS   Fioravanti,A., Clantin,B., Dewitte,F., Lens,Z., Verger,A.,
            Biondi,E.G. and Villeret,V.
  TITLE     Structural insights into ChpT, an essential dimeric histidine
            phosphotransferase regulating the cell cycle in Caulobacter
            crescentus
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 68 (Pt 9),
            1025-1029 (2012)
   PUBMED   22949187
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021595.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10090.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Thalassobius litoralis"
                     /db_xref="taxon:1010611"
     Protein         1..198
                     /product="histidine phosphotransferase family protein"
                     /calculated_mol_wt=20949
     Region          5..198
                     /region_name="HPt"
                     /note="Histidine phosphotransfer protein ChpT, HPt domain
                     [Signal transduction mechanisms]; COG5385"
                     /db_xref="CDD:444148"
ORIGIN      
        1 mphdnldlga ligsrichdl ispigaigng lelllmelpa spelsliaes vdnanarvqf
       61 frvafgkasq gqhvtpseie kilndvsrgg riamrwtgtd apnrataraa flaamcleta
      121 lplggeials hsgdhwtlha tgrritpqpd lwahlqapht ptgltagqvq failpgllae
      181 lgkqakvtft dtlatiqf
//
LOCUS       WP_235891676             432 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Klebsiella spallanzanii].
ACCESSION   WP_235891676
VERSION     WP_235891676.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella spallanzanii
  ORGANISM  Klebsiella spallanzanii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Klebsiella spallanzanii"
                     /db_xref="taxon:2587528"
     Protein         1..432
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=46385
     Region          <2..360
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(19..20,22..24,27,47,50..51,54,193,196..197,200..202,
                     205,233,237,291..292,296,300,316,319..320,323..324,327)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340879"
ORIGIN      
        1 mpsitvftwg arlaagiggs lmipavfgli salyqqrrrv aafgalgass gisfacgpil
       61 cgylldhtgw riafaslgll allillcsai ipaaekkrts ipfdtpgfll gtlglfltif
      121 gilripvwgl impfnadttf lglspapfvt lsglivllam lrwerhfear tgyallpavf
      181 lhtrlvrhgl yltgwiffay ssaiftvvsf aqivknlsam etgmlilpfa iclsacslgl
      241 plcihqrnpr rqcqmgllag mvgalaaaaa lhvsgfnhwl masglcliga gmgtiaanap
      301 vlvttgagnq haeqsggvqa asrdigqalg malistvmlt fltfsmkyqv qhdlaigqsa
      361 rqiiehlafv pwisdrafhq fiqtqnlatd dlfgilrhyq qsrmqstryg llamvvitlv
      421 llirlrnlpk sa
//
LOCUS       WP_235891693             336 aa            linear   BCT 02-MAR-2025
DEFINITION  FecR domain-containing protein [Klebsiella spallanzanii].
ACCESSION   WP_235891693
VERSION     WP_235891693.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella spallanzanii
  ORGANISM  Klebsiella spallanzanii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (residues 1 to 336)
  AUTHORS   Van Hove,B., Staudenmaier,H. and Braun,V.
  TITLE     Novel two-component transmembrane transcription control: regulation
            of iron dicitrate transport in Escherichia coli K-12
  JOURNAL   J Bacteriol 172 (12), 6749-6758 (1990)
   PUBMED   2254251
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04773.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Klebsiella spallanzanii"
                     /db_xref="taxon:2587528"
     Protein         1..336
                     /product="FecR domain-containing protein"
                     /calculated_mol_wt=37582
     Region          24..333
                     /region_name="PRK09774"
                     /note="fec operon regulator FecR; Reviewed"
                     /db_xref="CDD:236622"
ORIGIN      
        1 msrlralvna amtdslphkp dylalqqaae wyaqlleaep qaeihqrwra wldaceenrh
       61 awryvqtvsq rfqplsggla saaadtlllp stvmgrrral klsvlfasgt llswltyrht
      121 plresllavt adyhsatgei kqltlqdgtr lwlntasavd vrynrqlrqi vlisgdllid
      181 tardtrpffv sseqgqmqal gtrfsveqhd gsthlavysg tvevsaqrgh vvrrvnagqq
      241 ldfdrygkga lspnahvdag wsqgvlqann tplgeiikql aryrhgylac dpnvadlrvm
      301 gafpladtdk slamlaqifp vrihrrfsww vtvekr
//
LOCUS       WP_235891718             535 aa            linear   BCT 02-MAR-2025
DEFINITION  MauE/DoxX family redox-associated membrane protein [Flavobacterium
            gawalongense].
ACCESSION   WP_235891718
VERSION     WP_235891718.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium gawalongense
  ORGANISM  Flavobacterium gawalongense
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 535)
  AUTHORS   van der Palen,C.J., Reijnders,W.N., de Vries,S., Duine,J.A. and van
            Spanning,R.J.
  TITLE     MauE and MauD proteins are essential in methylamine metabolism of
            Paracoccus denitrificans
  JOURNAL   Antonie Van Leeuwenhoek 72 (3), 219-228 (1997)
   PUBMED   9403107
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018942.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07291.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Flavobacterium gawalongense"
                     /db_xref="taxon:2594432"
     Protein         1..535
                     /product="MauE/DoxX family redox-associated membrane
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0030416 - methylamine metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=61289
     Region          35..>173
                     /region_name="DoxX"
                     /note="cl21527"
                     /db_xref="CDD:451291"
ORIGIN      
        1 msklssridn tysfafsefy iglnlkfidm klsaltqsii lnsicllyvl lfvyaavskf
       61 ldfenfqvql gqspllsafa glvswcvpit eilisvalvf pryrlvglfa afslmvlftt
      121 yiiiilnfss fipcscggil ekmswtqhlv fnivfvflal igillmipkk itentkkhkr
      181 ifilipvvfv csiavvillf vlsediihhr nnfirrfphh pitktheldl khpsfyiagi
      241 enkkiylsny eaplhvlvid talqqqqcfv iklskpdltf rsiqvrvqsp yfylmdgtvp
      301 cifrgnltdw kaslwmygtv yftkaeplns etfamrtiss knhenilgti tvadttkvrl
      361 aphllekqid gvfdtdgmll yntqlkrvly tyyyrneylv snvslnsvdr ghtidtisra
      421 qikvahirsn nqnklaappl ivnkraatfa nylfvhaalm gryeteamwn kasiidvydf
      481 ientylfsfy vpslldqkmt dfrviddvfv alydhsivty airsdyykpt isksp
//
LOCUS       WP_235891865             139 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Klebsiella spallanzanii].
ACCESSION   WP_235891865
VERSION     WP_235891865.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella spallanzanii
  ORGANISM  Klebsiella spallanzanii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Klebsiella spallanzanii"
                     /db_xref="taxon:2587528"
     Protein         1..139
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=14725
     Region          <15..139
                     /region_name="FucP"
                     /note="Fucose permease [Carbohydrate transport and
                     metabolism]; COG0738"
                     /db_xref="CDD:440501"
ORIGIN      
        1 msplngpsyv ntlhfqtgfl vaslltgyft dkkglkimml igslmmavgl vgtslafsll
       61 lvigfilfyv aavatkltdk sgstmgliyv asgmggafag wligqvsqmy gvslgfnlii
      121 afvaiffvlt ffirenpen
//
LOCUS       WP_235891875             649 aa            linear   BCT 02-MAR-2025
DEFINITION  tripartite tricarboxylate transporter permease [Klebsiella
            spallanzanii].
ACCESSION   WP_235891875
VERSION     WP_235891875.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella spallanzanii
  ORGANISM  Klebsiella spallanzanii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (residues 1 to 649)
  AUTHORS   Winnen,B., Hvorup,R.N. and Saier,M.H. Jr.
  TITLE     The tripartite tricarboxylate transporter (TTT) family
  JOURNAL   Res Microbiol 154 (7), 457-465 (2003)
   PUBMED   14499931
REFERENCE   2  (residues 1 to 649)
  AUTHORS   Sweet,G.D., Kay,C.M. and Kay,W.W.
  TITLE     Tricarboxylate-binding proteins of Salmonella typhimurium.
            Purification, crystallization, and physical properties
  JOURNAL   J Biol Chem 259 (3), 1586-1592 (1984)
   PUBMED   6141166
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014073.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01970.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Klebsiella spallanzanii"
                     /db_xref="taxon:2587528"
     Protein         1..649
                     /product="tripartite tricarboxylate transporter permease"
                     /calculated_mol_wt=69159
     Region          10..>107
                     /region_name="TctB"
                     /note="Tripartite tricarboxylate transporter TctB family;
                     pfam07331"
                     /db_xref="CDD:462147"
     Region          153..638
                     /region_name="COG3333"
                     /note="TctA family transporter [General function
                     prediction only]"
                     /db_xref="CDD:442562"
ORIGIN      
        1 mralpltpfl ilifaitifs isvteyggag qhgagfmptl isglllflta idavidiknr
       61 gtrqslfsra eckalaliii avmlfvllld ilgfvvcscl llfaavyfne nqrrqtpagd
      121 gnihcriahy llrvcqraag gascgylvlr gdmdiflqaf ayinlsaila vlaasafglf
      181 vgsipgltat mavalmvpft ffmdpipala lmisvgassi yagdipgall ripgtpasaa
      241 yvadsnelvk qgkvnrvlgi glvssviggi igsfilmgaa pmlakfalkf ssyeytwlsl
      301 lgltcatlvv gnqplkgmvt lclgllmaci gydqisgvpr ftfgqisllq gvnfipamig
      361 lfaisgaiey yrdrvveavr svpetqsgin lfkgmgqviw srklnlgrss iigtligalp
      421 gagadiaawi syaiskkfsk qpqlyghgse eaivdssssn naslagswip slvfgipgds
      481 aaaiiigvly mkdmnpgptl flfqadklya vfilflianl allplatlav sfikriiwid
      541 kailypiili fsivgsfaid nsvssvvvml vmgvigywlq rkeypispii lgmilgpmle
      601 knllssmika ggdpmafvar pismvlaacf flvvalqltn iyrsfqrra
//
LOCUS       WP_235891928             597 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Ochrobactrum teleogrylli].
ACCESSION   WP_235891928
VERSION     WP_235891928.1
KEYWORDS    RefSeq.
SOURCE      Ochrobactrum teleogrylli
  ORGANISM  Ochrobactrum teleogrylli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Ochrobactrum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12697.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Ochrobactrum teleogrylli"
                     /db_xref="taxon:2479765"
     Protein         1..597
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=64541
     Region          37..>213
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     Region          68..>142
                     /region_name="PldB"
                     /note="Lysophospholipase, alpha-beta hydrolase superfamily
                     [Lipid transport and metabolism]; COG2267"
                     /db_xref="CDD:441868"
     Region          318..583
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 mvgipgmgdg vetipsskpl egtaaaspiv fsdtlglfqr aygtgldtvv vfaspwglee
       61 lcttrkfwri iadrlsqhgi aslrfdwpgt gdgrddidfs sglerwrkal ieaadkarll
      121 sgasrvviig qslgaavaae taphieglaa lallapvisg rfytrelavw ssmvdadlgl
      181 pdaqrikgav siasltmtpe iaadvkkinl lslsekpadt clllaradrp ndaelaghle
      241 klgvavtvea ftdydklisn pvishlplnv adrlvdwavp ladgrpaqks adetnlggqi
      301 rgdgfvempv afgpnnrlsg vlckplgdsk ghtvlflsss ydrrvgwgrt tvdmarrlar
      361 dgvsslrfdi anagdsppip gmpeqvlyth apemdvadal dyldaiglgr pvvagrcsga
      421 flglhcavld erisgavlvn pvtfywapel svedvvregn rtledygsra mrldtfkrlf
      481 rgeldirail rnlargvggr irglarkllr srtvegraiy safdelklrq vpltliyaek
      541 dsgreyfnyy fdqagdkvqg fdnvkvavip dadhnltpeh arnvyidair alaletr
//
LOCUS       WP_235891943             322 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR family transcriptional regulator [Ochrobactrum teleogrylli].
ACCESSION   WP_235891943
VERSION     WP_235891943.1
KEYWORDS    RefSeq.
SOURCE      Ochrobactrum teleogrylli
  ORGANISM  Ochrobactrum teleogrylli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Ochrobactrum.
REFERENCE   1  (residues 1 to 322)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012354.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00126.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Ochrobactrum teleogrylli"
                     /db_xref="taxon:2479765"
     Protein         1..322
                     /product="LysR family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=35203
     Region          29..318
                     /region_name="PRK11139"
                     /note="DNA-binding transcriptional activator GcvA;
                     Provisional"
                     /db_xref="CDD:182990"
ORIGIN      
        1 mcpqpinake lfiairkfng smnsrtgrrr lpslkalraf eavahcqsft aaaeelavsq
       61 gavshqikll eqalgcqlli rgprgvtvta egallaevcg raldeigavt aligqdnraq
      121 ilrvragpff smeviasria gflkqnpgiq lhlnnldids iahdredaqi kyclnapaga
      181 ysidlltekl vpvcspslle gvanpedllt npdiprlhyr dmsdwkrwis hhgigdiaan
      241 snlffddqht llaaarsgqg igfshrplle sdvqrgslgv vsekyfqpke sykficshet
      301 iasnhalqlf rdwlmaevst ic
//
LOCUS       WP_235892018             384 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Ochrobactrum teleogrylli].
ACCESSION   WP_235892018
VERSION     WP_235892018.1
KEYWORDS    RefSeq.
SOURCE      Ochrobactrum teleogrylli
  ORGANISM  Ochrobactrum teleogrylli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Ochrobactrum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Ochrobactrum teleogrylli"
                     /db_xref="taxon:2479765"
     Protein         1..384
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=42078
     Region          75..314
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 magaglatgm gimlpkgawa qsaklpsspv alnvidaagn laltqpifdn faseqkalvs
       61 rftfnkapap elpgkikaqq ranrididlv ivgpdalsag laddiwtdii alpenglpkl
      121 qdiylepawr mqemskgkgv vvsyypsgpl leyhpdkvkt apknaeella wtrdnpkkfi
      181 yarpansgpg rtflmglpyl lgdsnpkdpi kgwdktwayl kelhknieyy pagtgalmke
      241 lgegtrdmtv tttgwdinpr algvvpkemg vskldgfhwv cdahyfaipk gvseekiavl
      301 mefikfalkp dqqaysydag yfypgpavkd vtiemapkes qniiaefgrp eyaewiannp
      361 ielplepeal vaafrrwdee vaas
//
LOCUS       WP_235892058             230 aa            linear   BCT 02-MAR-2025
DEFINITION  HWE histidine kinase domain-containing protein [Ochrobactrum
            teleogrylli].
ACCESSION   WP_235892058
VERSION     WP_235892058.1
KEYWORDS    RefSeq.
SOURCE      Ochrobactrum teleogrylli
  ORGANISM  Ochrobactrum teleogrylli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Ochrobactrum.
REFERENCE   1  (residues 1 to 230)
  AUTHORS   Herrou,J., Crosson,S. and Fiebig,A.
  TITLE     Structure and function of HWE/HisKA2-family sensor histidine
            kinases
  JOURNAL   Curr Opin Microbiol 36, 47-54 (2017)
   PUBMED   28193573
REFERENCE   2  (residues 1 to 230)
  AUTHORS   Karniol,B. and Vierstra,R.D.
  TITLE     The HWE histidine kinases, a new family of bacterial two-component
            sensor kinases with potentially diverse roles in environmental
            signaling
  JOURNAL   J Bacteriol 186 (2), 445-453 (2004)
   PUBMED   14702314
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019174.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07536.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Ochrobactrum teleogrylli"
                     /db_xref="taxon:2479765"
     Protein         1..230
                     /product="HWE histidine kinase domain-containing protein"
                     /GO_function="GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=25194
     Region          <58..220
                     /region_name="COG3920"
                     /note="Two-component sensor histidine kinase, HisKA and
                     HATPase domains [Signal transduction mechanisms]"
                     /db_xref="CDD:443125"
     Region          133..212
                     /region_name="HWE_HK"
                     /note="HWE histidine kinase; smart00911"
                     /db_xref="CDD:214907"
ORIGIN      
        1 masasghcga ddagftisqs nhlgsgiydd lyafrpilge kencmgasfr dtwsevwdel
       61 lpmvqkayag eatfiedfpl vidrhgydeq cyftfcyspi fdeqgrvggm idtviettek
      121 vesekhakil naelahrikn tfsvvsaias qtfnnyadee vintftkrlf algnardvlr
      181 lgkssegslr qivsgittal avadrvhmng pdvmigpkga sirvsratrh
//
LOCUS       WP_235892098              74 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail tube protein, partial [Acinetobacter baumannii].
ACCESSION   WP_235892098
VERSION     WP_235892098.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 74)
  AUTHORS   Effantin,G., Boulanger,P., Neumann,E., Letellier,L. and Conway,J.F.
  TITLE     Bacteriophage T5 structure reveals similarities with HK97 and T4
            suggesting evolutionary relationships
  JOURNAL   J Mol Biol 361 (5), 993-1002 (2006)
   PUBMED   16876823
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039819.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18906.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         1..>74
                     /product="phage tail tube protein"
     Region          4..>74
                     /region_name="Phage_tube_2"
                     /note="Phage tail tube protein; pfam18906"
                     /db_xref="CDD:436820"
ORIGIN      
        1 mssgarqitq iakettvgtt pspfarttfe ftengldatv tkedsnsits griarssmit
       61 gaeyagelkc eaky
//
LOCUS       WP_235892100              70 aa            linear   BCT 02-MAR-2025
DEFINITION  recombinase family protein, partial [Acinetobacter baumannii].
ACCESSION   WP_235892100
VERSION     WP_235892100.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 70)
  AUTHORS   Yang,W. and Steitz,T.A.
  TITLE     Crystal structure of the site-specific recombinase gamma delta
            resolvase complexed with a 34 bp cleavage site
  JOURNAL   Cell 82 (2), 193-207 (1995)
   PUBMED   7628011
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012464.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00239.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         1..>70
                     /product="recombinase family protein"
                     /GO_function="GO:0000150 - DNA strand exchange activity
                     [Evidence IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
     Region          3..>43
                     /region_name="Ser_Recombinase"
                     /note="Serine Recombinase family, catalytic domain; a DNA
                     binding domain may be present either N- or C-terminal to
                     the catalytic domain. These enzymes perform site-specific
                     recombination of DNA molecules by a concerted, four-strand
                     cleavage and rejoining...; cl02788"
                     /db_xref="CDD:445923"
     Site            10
                     /site_type="active"
                     /note="catalytic nucleophile [active]"
                     /db_xref="CDD:238206"
ORIGIN      
        1 mrifgyarvs tsqqsldiqi ralkdagvka nriftdkasg sstgtvakla mrqpfvlfkg
       61 ltfqklclpg
//
LOCUS       WP_235892106             402 aa            linear   BCT 02-MAR-2025
DEFINITION  methylenetetrahydrofolate reductase C-terminal domain-containing
            protein, partial [Acinetobacter baumannii].
ACCESSION   WP_235892106
VERSION     WP_235892106.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 402)
  AUTHORS   Lee,M.N., Takawira,D., Nikolova,A.P., Ballou,D.P., Furtado,V.C.,
            Phung,N.L., Still,B.R., Thorstad,M.K., Tanner,J.J. and Trimmer,E.E.
  TITLE     Functional role for the conformationally mobile phenylalanine 223
            in the reaction of methylenetetrahydrofolate reductase from
            Escherichia coli
  JOURNAL   Biochemistry 48 (32), 7673-7685 (2009)
   PUBMED   19610625
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12225.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..402
                     /product="methylenetetrahydrofolate reductase C-terminal
                     domain-containing protein"
     Region          <3..207
                     /region_name="MetF"
                     /note="5,10-methylenetetrahydrofolate reductase [Amino
                     acid transport and metabolism]; COG0685"
                     /db_xref="CDD:440449"
     Region          299..381
                     /region_name="DUF5981"
                     /note="Methylene-tetrahydrofolate reductase C terminal;
                     pfam12225"
                     /db_xref="CDD:463498"
ORIGIN      
        1 dsiekvlhfs gkardiqdfe rfleqaksan iqnlllltgd klkehhngrd gqprsryles
       61 vnavmaakqh ggfrigvafn pfkyveaerd aqylklhkki kagadfiitq lgydiealkq
      121 aksfltkhdy sqqilacvmp ltlgranfmv khkvagivit phmlkvlage kqaghtdrvy
      181 lrcalqilic khlgfagihl sachkpeeqm llesyieqyr hlnlkaleel wsslwqvktg
      241 keftpeiarf srqptskqli kyrqlhvmhe amfgskiakg vgrfifkasf wenaliakll
      301 lktevlskhs lvgcescgqc rlgdtlyicp etcpkglang pcggttldrc efgdrecihs
      361 vkarlakavk qteilkekli ptvpletrgt sswknwylat ea
//
LOCUS       WP_235892104              94 aa            linear   BCT 02-MAR-2025
DEFINITION  Na+/H+ antiporter subunit E, partial [Acinetobacter baumannii].
ACCESSION   WP_235892104
VERSION     WP_235892104.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 94)
  AUTHORS   Hiramatsu,T., Kodama,K., Kuroda,T., Mizushima,T. and Tsuchiya,T.
  TITLE     A putative multisubunit Na+/H+ antiporter from Staphylococcus
            aureus
  JOURNAL   J Bacteriol 180 (24), 6642-6648 (1998)
   PUBMED   9852009
REFERENCE   2  (residues 1 to 94)
  AUTHORS   Putnoky,P., Kereszt,A., Nakamura,T., Endre,G., Grosskopf,E.,
            Kiss,P. and Kondorosi,A.
  TITLE     The pha gene cluster of Rhizobium meliloti involved in pH
            adaptation and symbiosis encodes a novel type of K+ efflux system
  JOURNAL   Mol Microbiol 28 (6), 1091-1101 (1998)
   PUBMED   9680201
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014012.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01899.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..94
                     /product="Na+/H+ antiporter subunit E"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
     Region          <1..84
                     /region_name="PRK08965"
                     /note="putative monovalent cation/H+ antiporter subunit E;
                     Reviewed; cl00807"
                     /db_xref="CDD:469933"
ORIGIN      
        1 rvaklvlgsp kklhpkwyrv pleteheqvn sllamiittt pgtvsagidq ergdilvhsl
       61 stentesdvq dikqryeapl meifdvksks edna
//
LOCUS       WP_235892133             168 aa            linear   BCT 02-MAR-2025
DEFINITION  amino acid--tRNA ligase-related protein, partial [Klebsiella
            spallanzanii].
ACCESSION   WP_235892133
VERSION     WP_235892133.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella spallanzanii
  ORGANISM  Klebsiella spallanzanii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012379.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00152.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Klebsiella spallanzanii"
                     /db_xref="taxon:2587528"
     Protein         <1..>168
                     /product="amino acid--tRNA ligase-related protein"
                     /GO_function="GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /GO_function="GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
     Region          1..>166
                     /region_name="aspS"
                     /note="aspartyl-tRNA synthetase; Validated; PRK00476"
                     /db_xref="CDD:234775"
ORIGIN      
        1 tlcgwvnrrr dlgslifidm rdregivqvf fdpdradalk laselrnefc iqvtgtvrar
       61 eekninadma tgaievlasd ltiinrsesl pldsnhvnte earlkyryld lrrpemaqrl
      121 ktrakitsfv rrfmddhgfl dietpmltka tpegardylv psrvhkvt
//
LOCUS       WP_235892137            1815 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF637 domain-containing protein [Klebsiella spallanzanii].
ACCESSION   WP_235892137
VERSION     WP_235892137.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella spallanzanii
  ORGANISM  Klebsiella spallanzanii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04830.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Klebsiella spallanzanii"
                     /db_xref="taxon:2587528"
     Protein         1..1815
                     /product="DUF637 domain-containing protein"
                     /calculated_mol_wt=190297
     Region          40..289
                     /region_name="TPS"
                     /note="TPS secretion domain; pfam05860"
                     /db_xref="CDD:461762"
     Region          784..800
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          802..821
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          843..862
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          <847..997
                     /region_name="COG4253"
                     /note="Uncharacterized conserved protein, DUF2345 family
                     [Function unknown]"
                     /db_xref="CDD:443395"
     Region          864..898
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          905..924
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          926..946
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          949..966
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          968..987
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1252..1386
                     /region_name="DUF637"
                     /note="Possible hemagglutinin (DUF637); pfam04830"
                     /db_xref="CDD:428148"
     Region          1686..1815
                     /region_name="Peptidase_C39_like"
                     /note="Peptidase family C39 mostly contains
                     bacteriocin-processing endopeptidases from bacteria. The
                     cysteine peptidases in family C39 cleave the
                     'double-glycine' leader peptides from the precursors of
                     various bacteriocins (mostly non-lantibiotic). The
                     cleavage...; cl00296"
                     /db_xref="CDD:469710"
ORIGIN      
        1 mdklahplar gaswlliylt avqplhpaia aginaangnt qvvikpgnvp vvniatpnaa
       61 gishntfkdf nvgtpgavln natqggktql gitiengnsr lkgkpaelii nevtsgnrse
      121 lkgklevfgn kagvmianpn gitcdgcgfi ntpsvtlttg kpqfdkkgal ealdvkkgtv
      181 iiggngldgs rteyvdvisr atelngkina ktltltqgan rvsfkdgtik titgdgakpq
      241 lavdtkalgg myagkirlva teagvgvnlk svtstqrdis lttagkitls nvkaqtdlnv
      301 sgrdivtpag isvraerdmt laattvdnrg sttahgdmri fastvsntgs gaalhshknl
      361 wiqkdakgnk atlvenrssr iqtntgdlvi rtetlnntrd vltyewkdin pnstafvnip
      421 qhrtisairh asgnitladv iywnatlggk wfgtanfnss dlvntarkey rrtatspaas
      481 lqagrngyin atllnnnesi ikanrdlilt gktlnhisgi tgtmdtwssy ntayrpsnnv
      541 spaipesqlt iagkqnktyt fqktgevksw rnptispatl saggnlvadf serieskepy
      601 atnvqysevm arpdtitakn illragsiit tdvmkatgdi tlqsdsstkm alalmtagkn
      661 lsilaggnve swqselkgen itlvsrggdv tshtsewpny fhsnglrwlg sleasrdlsm
      721 taaknillkn trfpvlsqni slvangditl ekneamlghe rpgvvltqar kqelfnrmlp
      781 geplrvsgdi tlsgkrlsly gagfeaggni sltsaantdl nmrslssryk affpdsripe
      841 lrsnlkaggn llissaadig lqgahivagk tatlqagkli wlgaygygvt dsgndnnrde
      901 lnvltrlhga ksltlaangg iqangstlts ggnitltsgg nmqfqsargt vyresgnawt
      961 etvsqtgvtl naggaltvis ggsilfqasr llakgamdva akggwlyaqa meesshyqrq
     1021 ttkrkwwgkk ttvkqtkhtt tnrvtefiag gnlsllsrdd styeaskiea kknatltstn
     1081 gkvnflavkn ttfeqtvsts kgfyikqank gysegkwvlp svhaggkltv naasgvsadv
     1141 kakngqalqg avaalsalpg tewlkglntr sdvqwntvkd aydswnyknq slnpavaavi
     1201 aiaaaavtag sslaatvats vtstvgggvv ttgavtagms slaaqaaval venqgnlskt
     1261 lsalgssssv kslatsmvig galagfdkvm nidvppdkar lpalvknegw gkivqrvagq
     1321 svissslnta inggsfkdnl tnallanign qinaegagli gdngeildlp gralshavva
     1381 gisaeigrgd gkgaaagala aelagvimqs slfepanqne rerqllrlqe alngneakeq
     1441 tarvigaltg alithtpegt ysgadsaqnv yrynmtehml qqyaldnqrd ilaaskgdta
     1501 aakrvqarre aaamvaitag gglavtaggl tilgaapeiv laarlivagc ksnpalclnq
     1561 agiyaadiia peaiigvgpi aagstlfvgk ssettkklaw etiksadntl knsafniqpv
     1621 adlikkevav gsvlpkkted ylinaykngt hiidgagesi gskikvnytp egsyinqtsh
     1681 asgggnlcgp ttcamiisdn qggivnldsv vkqfddirdt gvniyeisnv lskngivnyp
     1741 tktllpstlr elsmqgkpsi invetgsggh fiivdsykki dnigyymird pfngatgira
     1801 dilekamnfn gvtlk
//
LOCUS       WP_235892138             334 aa            linear   BCT 02-MAR-2025
DEFINITION  class I SAM-dependent methyltransferase family protein [Klebsiella
            spallanzanii].
ACCESSION   WP_235892138
VERSION     WP_235892138.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella spallanzanii
  ORGANISM  Klebsiella spallanzanii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023569.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12147.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Klebsiella spallanzanii"
                     /db_xref="taxon:2587528"
     Protein         1..334
                     /product="class I SAM-dependent methyltransferase family
                     protein"
                     /EC_number="2.1.1.-"
                     /calculated_mol_wt=37531
     Region          24..331
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(163..169,188..189,215..217,236)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
ORIGIN      
        1 mhvlpgfyhd tlgerdrala fdkirafldv lyaqppqpfd ysqedrwspg adswrqlngg
       61 pepysfddfa yrglryvmrm lgtqsdgvrl gfttgfdsgs tldyvyrnqp qgsswlgrni
      121 dknylnsvgw rgirqrkvhl qqliqqavaq lsaqgmpvrv vdiaaghgry vldaleaett
      181 vsdillrdys elnvekgqqm iaerdmsara rfeqgdafnr aelaalepkp tlgivsglye
      241 lfpenapvre slkglaqaip pggvliytgq pwhpqlktia wsltshkdgk awvmrvrtqg
      301 emdalvreag fekctqlide wgiftvsmav rrdd
//
LOCUS       WP_235892176             298 aa            linear   BCT 02-MAR-2025
DEFINITION  tape measure protein, partial [Acinetobacter baumannii].
ACCESSION   WP_235892176
VERSION     WP_235892176.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040129.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20155.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..>298
                     /product="tape measure protein"
     Region          1..164
                     /region_name="TMP_3"
                     /note="Tape measure protein; pfam20155"
                     /db_xref="CDD:466312"
ORIGIN      
        1 katedtfria qktyatwnsv lqvyqrfsdn aktlninmde tarltetvsk avaisgasaq
       61 aadaalvqfg qalasgtlrg eelnsvmeqt palakaiaqg mgitvgqlrs vaaegkitsk
      121 eivkalknvq ddvdalfakt ditigqsltl lnneitkfvg esgkgsgaah vladsiqlla
      181 snlklisdga lvlgiglvtk aiatktvavy advaataanv kaskekviad aaeaaaavkt
      241 aqaqiansqa tlqvlaaeka leverlkaqm navgrtqsit rmaelkkiea qvtrelaa
//
LOCUS       WP_235892171             161 aa            linear   BCT 02-MAR-2025
DEFINITION  major capsid protein, partial [Acinetobacter baumannii].
ACCESSION   WP_235892171
VERSION     WP_235892171.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 161)
  AUTHORS   White,H.E., Sherman,M.B., Brasiles,S., Jacquet,E., Seavers,P.,
            Tavares,P. and Orlova,E.V.
  TITLE     Capsid structure and its stability at the late stages of
            bacteriophage SPP1 assembly
  JOURNAL   J Virol 86 (12), 6768-6777 (2012)
   PUBMED   22514336
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039452.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20036.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..>161
                     /product="major capsid protein"
     Region          5..>161
                     /region_name="Gp13-like"
                     /note="Major capsid protein 13-like; pfam20036"
                     /db_xref="CDD:466267"
ORIGIN      
        1 tvnsdmiiyn qlaqtayler lqdnlnvfnq asngaivyrn eiiegdfnke afykvggsik
       61 hrdvnstakv vpekigsges vgvkvpykyg pyasteeafk rrartpeefa milgydlada
      121 lvagrlqysl aslkaaissn pdmvakgsia vdgrkaltrg m
//
LOCUS       WP_235892202              92 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Acinetobacter baumannii].
ACCESSION   WP_235892202
VERSION     WP_235892202.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 92)
  AUTHORS   Davies,D.R., Mahnke Braam,L., Reznikoff,W.S. and Rayment,I.
  TITLE     The three-dimensional structure of a Tn5 transposase-related
            protein determined to 2.9-A resolution
  JOURNAL   J Biol Chem 274 (17), 11904-11913 (1999)
   PUBMED   10207011
REFERENCE   2  (residues 1 to 92)
  AUTHORS   DasSarma,S.
  TITLE     Identification and analysis of the gas vesicle gene cluster on an
            unstable plasmid of Halobacterium halobium
  JOURNAL   Experientia 49 (6-7), 482-486 (1993)
   PUBMED   8335077
REFERENCE   3  (residues 1 to 92)
  AUTHORS   Ferrante,A.A. and Lessie,T.G.
  TITLE     Nucleotide sequence of IS402 from Pseudomonas cepacia
  JOURNAL   Gene 102 (1), 143-144 (1991)
   PUBMED   1650732
REFERENCE   4  (residues 1 to 92)
  AUTHORS   De Meirsman,C., Van Soom,C., Verreth,C., Van Gool,A. and
            Vanderleyden,J.
  TITLE     Nucleotide sequence analysis of IS427 and its target sites in
            Agrobacterium tumefaciens T37
  JOURNAL   Plasmid 24 (3), 227-234 (1990)
   PUBMED   1963949
REFERENCE   5  (residues 1 to 92)
  AUTHORS   Sato,S., Nakada,Y. and Shiratsuchi,A.
  TITLE     IS421, a new insertion sequence in Escherichia coli
  JOURNAL   FEBS Lett 249 (1), 21-26 (1989)
   PUBMED   2542093
REFERENCE   6  (residues 1 to 92)
  AUTHORS   Kroger,M. and Hobom,G.
  TITLE     Structural analysis of insertion sequence IS5
  JOURNAL   Nature 297 (5862), 159-162 (1982)
   PUBMED   6281654
REFERENCE   7  (residues 1 to 92)
  AUTHORS   Klaer,R., Kuhn,S., Tillmann,E., Fritz,H.J. and Starlinger,P.
  TITLE     The sequence of IS4
  JOURNAL   Mol Gen Genet 181 (2), 169-175 (1981)
   PUBMED   6268937
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01609.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..>92
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <1..92
                     /region_name="transpos_IS5_2"
                     /note="IS5 family transposase; NF033579"
                     /db_xref="CDD:468096"
ORIGIN      
        1 snsqvlgdll nqipqderid svytdgaydt kqcrqviadr qahavipprk nakpwkdtks
       61 sslernellr tvkrlgrtlw kkwsgyhrrs lv
//
LOCUS       WP_235892225             111 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase, partial [Acinetobacter baumannii].
ACCESSION   WP_235892225
VERSION     WP_235892225.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024867.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13476.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..>111
                     /product="AAA family ATPase"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /GO_process="GO:0006302 - double-strand break repair
                     [Evidence IEA]"
     Region          2..>56
                     /region_name="46"
                     /note="endonuclease subunit; Provisional; PHA02562"
                     /db_xref="CDD:222878"
ORIGIN      
        1 slvdgicwal ygttardvtg ddvvnetakk dccvslqied dgklynitry rkskkfknal
       61 ivssvdkagv etnltkgtdk etqllvnaiv gcsadvftsa vyagqermpd l
//
LOCUS       WP_235892217             248 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase, partial [Acinetobacter baumannii].
ACCESSION   WP_235892217
VERSION     WP_235892217.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 248)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 248)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019348.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07728.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..248
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
     Region          11..149
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Region          163..>210
                     /region_name="CbbQ_C"
                     /note="CbbQ/NirQ/NorQ C-terminal; pfam08406"
                     /db_xref="CDD:429978"
ORIGIN      
        1 lelninpyvw ghkgagksem fdqiaartgr plvriqhtsn teeshivgmw tvkngetife
       61 lgplalamkh gwmyladeyd faqpnvlsvy qavlegkply ikeadaanrv ikphpnfrfa
      121 atgntngsgd etglyqgtnl qnsanydrfg sviyksymkk edesliiqkr vglcaedadk
      181 lvdyanlvre qyanskisdt isprslinaa miglrrndyk hglklaftnk ltqvdqqvae
      241 dlaqrvfg
//
LOCUS       WP_235892262             378 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Mycolicibacterium hodleri].
ACCESSION   WP_235892262
VERSION     WP_235892262.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium hodleri (Mycobacterium hodleri)
  ORGANISM  Mycolicibacterium hodleri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 378)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 378)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02770.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Mycolicibacterium hodleri"
                     /db_xref="taxon:49897"
     Protein         1..378
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=40781
     Region          8..375
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(96,126,128,159,161,357..359,361,363)
                     /site_type="active"
                     /db_xref="CDD:173841"
ORIGIN      
        1 msdiedieal raeirsflen aekptglrny gptptdadvg pgrawhkyla ehdlvclhwp
       61 veyggrdasv alqavfadec aragvprqlg itaidlagpv litfgtdaqk aqylepirlg
      121 ddvwtqlfse pgagsdlagv rtkaektagg wlvngqkvws saansarygl llartgpesh
      181 rglsmfivpm daagvtvrpl tqldgeskfn evffdavelt ddaligeagq gwtiamvtlg
      241 rerltlgsqa vsmfklheqm mqaardrnll dpvlsrsmtk lwsrmwllrf twqraieagd
      301 tgssafsvlk lmtsetdral gdmatevlgt dacvdpgdds daaplvhaml vgraqtilgg
      361 tseiqrnilg ervlglpk
//
LOCUS       WP_235892277             433 aa            linear   BCT 02-MAR-2025
DEFINITION  neutral zinc metallopeptidase [Mycolicibacterium hodleri].
ACCESSION   WP_235892277
VERSION     WP_235892277.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium hodleri (Mycobacterium hodleri)
  ORGANISM  Mycolicibacterium hodleri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016143.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04228.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Mycolicibacterium hodleri"
                     /db_xref="taxon:49897"
     Protein         1..433
                     /product="neutral zinc metallopeptidase"
                     /calculated_mol_wt=46500
     Region          10..213
                     /region_name="YpfJ"
                     /note="Predicted metalloprotease [General function
                     prediction only]; COG2321"
                     /db_xref="CDD:441895"
     Region          <256..394
                     /region_name="Zn_peptidase"
                     /note="Putative neutral zinc metallopeptidase; cl19825"
                     /db_xref="CDD:473215"
ORIGIN      
        1 mkpevptptg akkpdssnvk iegdpdtpvn klaidaiadl qsfwadqfpk lynedykpvd
       61 gglfaltpds engpkcassy advagnafyc kiddsvawda sgllpelqkk ygdfvipivl
      121 ahefghaiqq rsgffdqnel tvsselqadc faggwskhaq ddgvfevksa dldkslagil
      181 dlrdspgtnv qdpsahgsgf drvsafqdgy dngvekckgy kdgdpmvlel pfndeqdaas
      241 ggqapydsia ngvpydledy wsqvypeltd gqawtplkpq qpfapssppd cggqsaegyv
      301 lfycvpddyv gwdnedampa iydqggdyaf atllatqwgl aalnrlgdds dektstargd
      361 clagaytasv ilfnreatss fhispgdlde gikalllfrg agdvdrqgag fdrtrafreg
      421 vvdgaqacls yqv
//
LOCUS       WP_235892402             302 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-dependent oxidoreductase [Mycolicibacterium hodleri].
ACCESSION   WP_235892402
VERSION     WP_235892402.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium hodleri (Mycobacterium hodleri)
  ORGANISM  Mycolicibacterium hodleri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 302)
  AUTHORS   Dengler,U., Niefind,K., Kiess,M. and Schomburg,D.
  TITLE     Crystal structure of a ternary complex of D-2-hydroxyisocaproate
            dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate
            at 1.9 A resolution
  JOURNAL   J Mol Biol 267 (3), 640-660 (1997)
   PUBMED   9126843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02826.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Mycolicibacterium hodleri"
                     /db_xref="taxon:49897"
     Protein         1..302
                     /product="NAD(P)-dependent oxidoreductase"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
                     /calculated_mol_wt=31821
     Region          2..298
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(139..141,143,161..163,188..189,216)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:240643"
ORIGIN      
        1 mkvlvpddlg lelptrstti davfyrpgep wpaehvdaav vvvgfenaea tgarfvelph
       61 lrlvqtlnag yeqwqpllpa gvmlsngrga hggssaewav aalltiyrdl syfdsqraqg
      121 lwrprttetl igkrivvlga gdlavnlaar lepfetvvtl vgqrerpgvv aladvdqllp
      181 aadavvamlp enesthhlvd aaflgllhdg avvvnagrgg avdtdallae ltsgrlraal
      241 dvtdpeplpa ghplwsapgl lltphvagst egawqrawrv algqldvfad ggrppnlvag
      301 pd
//
LOCUS       WP_235892404            1372 aa            linear   BCT 02-MAR-2025
DEFINITION  SpoIIE family protein phosphatase [Mycolicibacterium hodleri].
ACCESSION   WP_235892404
VERSION     WP_235892404.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium hodleri (Mycobacterium hodleri)
  ORGANISM  Mycolicibacterium hodleri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 1372)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1372
                     /organism="Mycolicibacterium hodleri"
                     /db_xref="taxon:49897"
     Protein         1..1372
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=148891
     Region          65..560
                     /region_name="COG4251"
                     /note="Bacteriophytochrome (light-regulated signal
                     transduction histidine kinase) [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443393"
     Region          328..560
                     /region_name="KdpD"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; COG2205"
                     /db_xref="CDD:441807"
     Region          623..>769
                     /region_name="OmpR"
                     /note="DNA-binding response regulator, OmpR family,
                     contains REC and winged-helix (wHTH) domain [Signal
                     transduction mechanisms, Transcription]; COG0745"
                     /db_xref="CDD:440508"
     Region          <742..874
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          838..1244
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
     Region          1251..1371
                     /region_name="RsbW"
                     /note="Anti-sigma regulatory factor (Ser/Thr protein
                     kinase) [Signal transduction mechanisms]; COG2172"
                     /db_xref="CDD:441775"
ORIGIN      
        1 mrgnsvvfra ddevgrdlaa vdwaatplgr peewpqslrt avsillssrf pmwmawgpel
       61 tffcnaayrr dtlgqkypwa lgrpasqvwe eiwtdigpri drvlstgeat wdealmlfle
      121 rsgypeetyh tfsysplrde ntdvvgmlcv vsedtdrvig errmatlrdl gsdpsvvrte
      181 rqmlnfaadq lagnpydlpf tltylfgddg darlagasgi gaghpaapel isadgpavwp
      241 vqkprrgese lveldermvd lpvgawsepp dhalvvpllq qggapvglli aalnrhrpld
      301 egyrgfielv aghiaagvgs arsyraqqqr aeelaeldsa ktaffsnish efrtpltlil
      361 gpvdelrarp gldakardel elihrnglrl aklvntlldf srlqagrmqs rfepvdlsaf
      421 taelasvfrs svdragltft vdcpsldepv yldrdmwekv vlnllsnalk ftfegsitvq
      481 vrrddagavv tvadtgigvs aaemprlfer fhrvetarar stegsgigla lvrelvglhg
      541 gtitaesreg egstftiavp fgsahlaadd ivsprgstas agaiaepfvq ealrwlpmdp
      601 espashasnp viaaaatgdg evrvliaddn admreyltnl lrssgcqvva vndglqalea
      661 vrrelpdlvi sdvmmpgldg lqllaalrnd prtaalpill lsaragqeas ieglqagadd
      721 ylvkpfaaae llarvranve larlrnhhar wrtalvdslq eaffvcdeqg avieintafa
      781 dmlgygpegl pyeavhpwwp dvdtdpeahr laetefagll dqthgtftvp vrhrnghrvw
      841 vavnfnhaqd pdtarrvmvg tfrdvtaehy avqretalaa lnqqlvqads ldgalrgave
      901 elrevwrarl vvaatfsgdg apdvlgvgdd vgwaemssrr rqlieslrda dllttasgda
      961 gtagialqhp rgvlvvwiel seqrpftard htlltvlagr lgqglqrvyq ldeqretava
     1021 lqhamlgpvn lpdgfavryh pasrplevgg dwydvvdldd grfalivgdc vghglsaatv
     1081 mgqlrsacra lfleqsapsa vlagmdrfaa rlvgarctta fcavltletg elvyssaghp
     1141 ppilvhadgt tamldggsgl plalrlgrlr pevrmtmpar stlllytdgl verrgssidd
     1201 gmvraidlvl agrsqtldev adhlmaqlep gggypddvav llyrqptpla mdfaadvnhl
     1261 apsrdalrsw laqagvesdq iqdvliatge avanaiehgh rdrpegtvsl raaavadrlh
     1321 vtvtdtgrwk tprevadirr grgmglirnl medfsihtdd vgttvhmhtr ii
//
LOCUS       WP_235892413             500 aa            linear   BCT 02-MAR-2025
DEFINITION  CoA transferase [Mycolicibacterium hodleri].
ACCESSION   WP_235892413
VERSION     WP_235892413.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium hodleri (Mycobacterium hodleri)
  ORGANISM  Mycolicibacterium hodleri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 500)
  AUTHORS   Heider,J.
  TITLE     A new family of CoA-transferases
  JOURNAL   FEBS Lett 509 (3), 345-349 (2001)
   PUBMED   11749953
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014564.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02515.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Mycolicibacterium hodleri"
                     /db_xref="taxon:49897"
     Protein         1..500
                     /product="CoA transferase"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=53656
     Region          233..>447
                     /region_name="CaiB"
                     /note="Crotonobetainyl-CoA:carnitine CoA-transferase CaiB
                     and related acyl-CoA transferases [Lipid transport and
                     metabolism]; COG1804"
                     /db_xref="CDD:441409"
ORIGIN      
        1 mnevvptlte aisrsldapi eaevgydvht efgavlsgvg istddiggtv sfrgvdpivp
       61 stlrlgaaaa iglaaksaav aalwrdrtgs gqaidvdlrt aphrlcpfyd rkwelingha
      121 prtssnpsqa lgftfhrtad grwvmplnpy prikiaaqkl lgtpddaasv sdaislwrgs
      181 eleeagadag vvmplvrtah efmaldqyrh fladaplvev tpigpaaaep lhprpaspld
      241 gvralgmghv iagagtgral alhgadvlnl wrpdelehds tyatanvgmr safldirsae
      301 dheklrslla dadvffanrr pgmlehygls peeaaelrpg iiyatnslng lrgpwarrvg
      361 fdqtagslvg mmtleggdgp pqlppilvvn dyivswlttm giisalrrra vdggsyrvhv
      421 sltrvalwil slgvfdreya yatagvdsdh ayldpetfta qtplglyqgv tdqvrmsatp
      481 gdyrhvllpr gscrpewear
//
LOCUS       WP_235892527            1450 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Mycolicibacterium hodleri].
ACCESSION   WP_235892527
VERSION     WP_235892527.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium hodleri (Mycobacterium hodleri)
  ORGANISM  Mycolicibacterium hodleri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13191.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Mycolicibacterium hodleri"
                     /db_xref="taxon:49897"
     Protein         1..1450
                     /product="AAA family ATPase"
                     /calculated_mol_wt=158089
     Region          <13..973
                     /region_name="COG3899"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443106"
     Region          976..1380
                     /region_name="AcyC"
                     /note="Adenylate cyclase, class 3 [Signal transduction
                     mechanisms]; COG2114"
                     /db_xref="CDD:441717"
ORIGIN      
        1 mttplldldg hvvgrrvelt elrnavesag rvgggcvlls gapgvgkstl lhafgaeiag
       61 rdcvfaygrc rdgapapysa lgdalgaivr smeatgpaer drwradlisg tsslagilgd
      121 lvpelaqvlg aasptadlda adtrrrlhra airlvsdtas yrsvvlaidd lqwadrdtll
      181 llselltqsv knvvvlgahr agefdldtag ldsesvvgie ltplthadve ellvavsgrg
      241 velsdvaaef qhrtggnplq vrqllyraqr egaltavgas grpswdlril tsievtatsa
      301 efleryldql gptdravlss ltciggefdl adataaaaqp pdvvvhalws glelrlleal
      361 dsrgqritna isrdgryrfs hdrvaeaaga dltadarret hlrigrrlvs lgedrlfeaa
      421 rhvgiggtgl taddertqfv eilrraarka rtqasfplal dscrkalall geqrwsahfd
      481 ltrqlqldaa daallvgdva alhdlldeae qvldepadra rvaylrlkgr vaqdrlreal
      541 eiglralrel geplppdpgk prmavalgrm klammrwtde rllqlpqced rrvieiqril
      601 selrsmsyiv rpnifplvvr kqldltlehg htpssplvla syglllvilg drvgaqrfge
      661 vgmlladrpe fraarpetlf ihlnfihhwr hpireglgql rdavtqaldq gdqeyagfla
      721 avllsqsfwi grpyqeidvl aqslipeirs qpvprrlcqa vqqislnlmg rsedpfllag
      781 esgyderdvl paariegdev algaaanmkl glhfwsgdhs gavdmtaeav ehiggmagta
      841 ivqlvhmtgv lsrihlapnd patrravrea lglhrkwaad apanyaapca liegtwarar
      901 gknrdaerhl dramglaedy qlpligalar eeaatlyaet grttlsqhml rsayqrwlsq
      961 glalrtdrla rehpwllgrd lvqadstgld qigahhlvra lsaartpedl anvmlgtvld
     1021 ttgasrvlff tggadgvavr avrerdgtmt adgpwtdvay dltivrrvid agsplvvaae
     1081 ligsgsrrvp rraprattvs vlavpimlqn raigviyaeq celdrrftad heeavsflca
     1141 qaaapvwnfq leaqlraade yrqslmdvqs rfvpnellri ldiddlrrvr sgyrveremt
     1201 vlisdirgft tmiedmnvse asnlaqgflr avempiiscn gmiqdvrgde ivavfesesd
     1261 avraglamlr slrehngerr algseelrag igtntglvgv glvggvnrmv ltiigdavnl
     1321 aariesttkr ygsamlisdt trarlktedg fdirrmervm vvnrrrpvti yevfdddpap
     1381 lrtakraaqp afdaafaffd agdadqarea fercslllpd dpvaalhlah cdamargelt
     1441 pgrdvmllnk
//
LOCUS       WP_235892569             316 aa            linear   BCT 02-MAR-2025
DEFINITION  metal ABC transporter solute-binding protein, Zn/Mn family
            [Mycolicibacterium hodleri].
ACCESSION   WP_235892569
VERSION     WP_235892569.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium hodleri (Mycobacterium hodleri)
  ORGANISM  Mycolicibacterium hodleri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 316)
  AUTHORS   Ilari,A., Alaleona,F., Tria,G., Petrarca,P., Battistoni,A.,
            Zamparelli,C., Verzili,D., Falconi,M. and Chiancone,E.
  TITLE     The Salmonella enterica ZinT structure, zinc affinity and
            interaction with the high-affinity uptake protein ZnuA provide
            insight into the management of periplasmic zinc
  JOURNAL   Biochim Biophys Acta 1840 (1), 535-544 (2014)
   PUBMED   24128931
REFERENCE   2  (residues 1 to 316)
  AUTHORS   Gabbianelli,R., Scotti,R., Ammendola,S., Petrarca,P., Nicolini,L.
            and Battistoni,A.
  TITLE     Role of ZnuABC and ZinT in Escherichia coli O157:H7 zinc
            acquisition and interaction with epithelial cells
  JOURNAL   BMC Microbiol 11, 36 (2011)
   PUBMED   21338480
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 316)
  AUTHORS   Lee,Y.H., Deka,R.K., Norgard,M.V., Radolf,J.D. and Hasemann,C.A.
  TITLE     Treponema pallidum TroA is a periplasmic zinc-binding protein with
            a helical backbone
  JOURNAL   Nat Struct Biol 6 (7), 628-633 (1999)
   PUBMED   10404217
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013465.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01297.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Mycolicibacterium hodleri"
                     /db_xref="taxon:49897"
     Protein         1..316
                     /product="metal ABC transporter solute-binding protein,
                     Zn/Mn family"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=32444
     Region          50..314
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(116..117,120,163)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238347"
ORIGIN      
        1 mtsrargrfp aimvavaaat vtmaaacsss stpapssagp assgaaasts idvvastnvw
       61 gdiakqigge hvnvtsimsd pngdpheyea daktaatlsk sqfvvenglg yddfmdklla
      121 aspnpsrkvl naadvmqitg sdanphiwyd iakipdvata iadqlgmldp anaatftena
      181 ktltdsltpi ndaianiktk ytgapigyte rvpgylvdaa glklatpasf aqsiedgndp
      241 spadnvamdk altgkaikil lyngqvtspa tdavkqladk sgvpvvavte tlpstdmdfq
      301 awqlrqitei tsalgg
//
LOCUS       WP_235892707             510 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4185 domain-containing protein [Mycolicibacterium hodleri].
ACCESSION   WP_235892707
VERSION     WP_235892707.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium hodleri (Mycobacterium hodleri)
  ORGANISM  Mycolicibacterium hodleri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025182.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13810.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Mycolicibacterium hodleri"
                     /db_xref="taxon:49897"
     Protein         1..510
                     /product="DUF4185 domain-containing protein"
                     /calculated_mol_wt=53934
     Region          154..504
                     /region_name="DUF4185"
                     /note="Domain of unknown function (DUF4185); pfam13810"
                     /db_xref="CDD:433495"
ORIGIN      
        1 mtpmvtvaaa antksaarva tidvapptps paaaqnplkv vgsvvssvvn wvlsplagag
       61 sttpaqppla wsllafarre fenfvtavtg natvtpaasv tatslslaaa tstvaeaavn
      121 vpnfplpgaq lspstkfvqw vtgnyqtgnp liadtlkrfd itgtdvgviw dngmvddpst
      181 pynehqvlma fgdtfsganm tglwrfnvll rsadtnlsdg mtipngewfn gnmfggtpls
      241 spttarqiih adglpagvtl iptagisvpt pgtrfgvtqy vnvmsvtkwg aagswttnys
      301 ataysvdnge nwtiapssvr ynqfwggnkn fqqgafvrpg dgyvysygtp ngrhgaayvs
      361 rvaekdilda skyeyysags aggwfgigat pagwyknnpa aatplfgqdr aakvgnqvse
      421 msvqyneqlg kyvvlygdrf nnivmrtadt pegtwspatv lmaqqpggiy apmmhpwsps
      481 tlgtgtdlyw nlslysqynv mlmktdltkv
//
LOCUS       WP_235892146             273 aa            linear   BCT 02-MAR-2025
DEFINITION  StfH/YfcO family fimbrial adhesin [Klebsiella spallanzanii].
ACCESSION   WP_235892146
VERSION     WP_235892146.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella spallanzanii
  ORGANISM  Klebsiella spallanzanii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (residues 1 to 273)
  AUTHORS   De Masi,L., Yue,M., Hu,C., Rakov,A.V., Rankin,S.C. and
            Schifferli,D.M.
  TITLE     Cooperation of Adhesin Alleles in Salmonella-Host Tropism
  JOURNAL   mSphere 2 (2), e00066-17 (2017)
   PUBMED   28289725
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 273)
  AUTHORS   Li,Y., Wang,H., Ren,J., Chen,L., Zhuge,X., Hu,L., Li,D., Tang,F.
            and Dai,J.
  TITLE     The YfcO fimbriae gene enhances adherence and colonization
            abilities of avian pathogenic Escherichia coli in vivo and in vitro
  JOURNAL   Microb Pathog 100, 56-61 (2016)
   PUBMED   27616446
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022690.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11245.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Klebsiella spallanzanii"
                     /db_xref="taxon:2587528"
     Protein         1..273
                     /product="StfH/YfcO family fimbrial adhesin"
                     /calculated_mol_wt=29184
ORIGIN      
        1 mlvlaivgal fsastlaqgk lrssqfettl ywassgitgi rydisvstpk gvyygvyetr
       61 tlilnreipn vswtgpstpp tlylkswgtk sdsncpgldt hywdcakqvl ritiqsddyc
      121 cpwvastvit staptqaast ytgpparssv cptvpvatyd vswdantpkh ekvltitptg
      181 gtvsttlkty lmesgklcdk skmdtrgagc rvvgtgvtls ilgcdnnvvs tvalahaltd
      241 telhditvsv ntknigtgtv kstcnfqyil eql
//
LOCUS       WP_235892210             314 aa            linear   BCT 02-MAR-2025
DEFINITION  phage terminase large subunit, partial [Acinetobacter baumannii].
ACCESSION   WP_235892210
VERSION     WP_235892210.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 314)
  AUTHORS   Gual,A., Camacho,A.G. and Alonso,J.C.
  TITLE     Functional analysis of the terminase large subunit, G2P, of
            Bacillus subtilis bacteriophage SPP1
  JOURNAL   J Biol Chem 275 (45), 35311-35319 (2000)
   PUBMED   10930407
REFERENCE   2  (residues 1 to 314)
  AUTHORS   Chai,S., Bravo,A., Luder,G., Nedlin,A., Trautner,T.A. and
            Alonso,J.C.
  TITLE     Molecular analysis of the Bacillus subtilis bacteriophage SPP1
            region encompassing genes 1 to 6. The products of gene 1 and gene 2
            are required for pac cleavage
  JOURNAL   J Mol Biol 224 (1), 87-102 (1992)
   PUBMED   1548711
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016359.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04466.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         1..>314
                     /product="phage terminase large subunit"
     Region          19..>303
                     /region_name="XtmB"
                     /note="Phage terminase large subunit [Mobilome: prophages,
                     transposons]; COG1783"
                     /db_xref="CDD:441389"
ORIGIN      
        1 madkvrlslh pkqmevylsn arfrvvvagr rwgktslsrt liisksrkpr qriwyvapty
       61 rmakqimwkd lieaiprkwv vkinhsslsi elvngtliel kgaddpdslr gvgidflvld
      121 efqdiseeaw tqclrptlas tgghaifigt pkaynqlytv ymqgqdpkkv kagqwqswqf
      181 ptitspfipe seieaaradm deksfkqefl asfetmsgrv yypfdrkehv gkypfdpklp
      241 iwigmdfnid pmstvimqpq pngevwvvde ivqfgsntee iceeierkyw rymkqivifp
      301 dpaggqrqha rges
//
LOCUS       WP_235892804             181 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Mycolicibacterium hodleri].
ACCESSION   WP_235892804
VERSION     WP_235892804.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium hodleri (Mycobacterium hodleri)
  ORGANISM  Mycolicibacterium hodleri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024917.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13527.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Mycolicibacterium hodleri"
                     /db_xref="taxon:49897"
     Protein         1..181
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /calculated_mol_wt=19474
     Region          19..131
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
     Site            order(84..86,96..97)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
ORIGIN      
        1 mlhtarlvht sdldgetred arrmlvdafa dgetdftdad wehalggmha licvrgalia
       61 hgavvqrrml hqgaalrcgy leavavredw rgqglamavm daleqvlrga yqlgalssse
      121 agrhiygsrg wlpwqgttav lgpsgvtptp dddgsvfvlp lnvdldttge ltcdyrdgdv
      181 w
//
LOCUS       WP_235892813             397 aa            linear   BCT 02-MAR-2025
DEFINITION  iron-containing alcohol dehydrogenase [Mycolicibacterium hodleri].
ACCESSION   WP_235892813
VERSION     WP_235892813.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium hodleri (Mycobacterium hodleri)
  ORGANISM  Mycolicibacterium hodleri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012678.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00465.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Mycolicibacterium hodleri"
                     /db_xref="taxon:49897"
     Protein         1..397
                     /product="iron-containing alcohol dehydrogenase"
                     /EC_number="1.1.1.1"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=41822
     Region          20..393
                     /region_name="DHQ_Fe-ADH"
                     /note="Dehydroquinate synthase-like (DHQ-like) and
                     iron-containing alcohol dehydrogenases (Fe-ADH); cl02872"
                     /db_xref="CDD:445950"
     Site            order(53,111..113,116,119,152..153,155,193,201,208,212,
                     277,281,291)
                     /site_type="active"
                     /db_xref="CDD:341447"
     Site            order(53,111..113,152..153,155,193,291)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:341447"
     Site            order(208,277,291)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:341447"
ORIGIN      
        1 mprpeerrpa gglapgrvlk fhapeivfgv dsmveaahaa lrlgalrpml vtdsglidag
       61 wademighlr eqgvearvws qltpnpkdhe iaagyefyrt hacdvlvavg ggsvidaakg
      121 vailaanggn ildyegvdka lmpipplvvv pstsgtgadv sqfcivtdtt rntkitilgr
      181 slvpditvid prllttmpew lnaatgldal thgieafvsl ghnqltdhha lravqmvidn
      241 lvstmdrpad msarilmaqa aleaglaftn ailgaahams hqvgglldlp hgvingvllp
      301 hvirfnaehd phpfqaiaay lgvadprapa aeaalaladr ieqlavrvgv prglaqlgvs
      361 dddlprlaaa alqdacmttn prqademqiq alfraam
//
LOCUS       WP_235892844             283 aa            linear   BCT 02-MAR-2025
DEFINITION  cutinase family protein [Mycolicibacterium hodleri].
ACCESSION   WP_235892844
VERSION     WP_235892844.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium hodleri (Mycobacterium hodleri)
  ORGANISM  Mycolicibacterium hodleri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 283)
  AUTHORS   Longhi,S., Czjzek,M., Lamzin,V., Nicolas,A. and Cambillau,C.
  TITLE     Atomic resolution (1.0 A) crystal structure of Fusarium solani
            cutinase: stereochemical analysis
  JOURNAL   J Mol Biol 268 (4), 779-799 (1997)
   PUBMED   9175860
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013265.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01083.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Mycolicibacterium hodleri"
                     /db_xref="taxon:49897"
     Protein         1..283
                     /product="cutinase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=28607
     Region          32..222
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 mgklgiapmv alaaltmsvm satapeaaae pcpdaevifa rgttelpgvg pvgeafvdsv
       61 rarigtksvg vyavdypatt afstaiqgia darnhilata ascpdtkmvl ggfsqgaavm
      121 gfvtasvvpd gvapldiptp mppeiadhva avvlfgkpst rfmkaindpd vvvgpnytak
      181 aselcvdndl vcdahgrsfs ahnqyvelgl vdqgavfavq rlqaswtade aepststpea
      241 lsapvqavaq pqhtestaet lpgpaplpgp atftqtssga paa
//
LOCUS       WP_235892881              51 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6131 family protein [Mycolicibacterium hodleri].
ACCESSION   WP_235892881
VERSION     WP_235892881.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium hodleri (Mycobacterium hodleri)
  ORGANISM  Mycolicibacterium hodleri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040003.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19626.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..51
                     /organism="Mycolicibacterium hodleri"
                     /db_xref="taxon:49897"
     Protein         1..51
                     /product="DUF6131 family protein"
                     /calculated_mol_wt=5364
ORIGIN      
        1 mivlgiillv vgyllplpll itigwillai giilfilgav grpvggrkvw f
//
LOCUS       WP_235892910             542 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Mycolicibacterium
            hodleri].
ACCESSION   WP_235892910
VERSION     WP_235892910.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium hodleri (Mycobacterium hodleri)
  ORGANISM  Mycolicibacterium hodleri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 542)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Mycolicibacterium hodleri"
                     /db_xref="taxon:49897"
     Protein         <1..>542
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..151
                     /region_name="entF"
                     /note="enterobactin non-ribosomal peptide synthetase EntF;
                     PRK10252"
                     /db_xref="CDD:236668"
     Region          154..541
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation domain of nonribosomal
                     peptide synthetases (NRPSs) and similar domains; cd19540"
                     /db_xref="CDD:380463"
ORIGIN      
        1 yltetttgti epaairtala dqlptymvpa avvvldhlpl tvngkldtha lpppdytnaq
       61 hyraptnaie diltgiythv lgidhigidd sffdlggdsl samrliaaik sgldsdlpvh
      121 alfdaptikq laprlgagaa praplvarer petvplsfgq grlwfidqlq gpsavynmpv
      181 tlriggrlda dalraaladv vgrheslhtl fpavegiprq lvvasegadf gwdvvdaagw
      241 setqfaeave kaiqhsfdla teiplraklf hvghddhvlv gvvhhiaadg wsitplirdl
      301 gdayasrcag rspgwaplpv qyadytlwqr aqlgdlddgd spiaaqlayw qealagmper
      361 lqlptdrpyp avadqrgati pvewpaelqq rvrevarqhn atsfmvvqaa lavllsklsa
      421 ssdvavgfpi agrrdpalde lvgffvntlv lrvevtgdpt vsellaqvrr rslaafdhqd
      481 vpfevlverl nptrslahhp lvqvllawqn faghdnsapa aglalgdlqv tqvpvdtrta
      541 rt
//
LOCUS       WP_235892934             595 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3857 domain-containing protein [Flavobacterium franklandianum].
ACCESSION   WP_235892934
VERSION     WP_235892934.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium franklandianum
  ORGANISM  Flavobacterium franklandianum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024371.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12969.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Flavobacterium franklandianum"
                     /db_xref="taxon:2594430"
     Protein         1..595
                     /product="DUF3857 domain-containing protein"
                     /calculated_mol_wt=68204
     Region          <209..324
                     /region_name="YebA"
                     /note="Transglutaminase-like enzyme, putative cysteine
                     protease [Posttranslational modification, protein
                     turnover, chaperones]; COG1305"
                     /db_xref="CDD:440916"
     Region          <499..590
                     /region_name="DUF3858"
                     /note="Domain of Unknown Function with PDB structure
                     (DUF3858); pfam12970"
                     /db_xref="CDD:404007"
ORIGIN      
        1 mrldqidili ssqrnmnvkn krvvtvlnek gqeainayeh ynkkttveni qatvfdafgn
       61 eikkikrkdf rdqcatdggt vfsdsryifl dytptqypft iiyeseiets ttafipqwfp
      121 lndyqlsvek silnvsypdn lgfkkmefnf anfkinktvd sstklsyiat nipalkqedy
      181 spaysvlpkv mmclelfhle gvdgtakswk eygqwysdkf ltgttelpee tkikiknlvg
      241 dekdpikkaa ivykylqeks ryvsiqvgig gwkpmlandv drlgygdcka lsnytralln
      301 avdvpsyvtl lygdrdkhdi qsdfvsmqgn hmilsipngd nyvflectsq dnpfgyqanf
      361 tddrtvlvvk pdggeivrtk nyenkgnaqs skgnyslven gdfsgnieiv sqgsqysqky
      421 rlettqpter ekhykeywdn innlkinktt fsndkdkisf tentaisavn ygivsnnkmi
      481 fvvnafnqts gvikrirnrk npfeiqrgsy dtdeiavalp tgftieslpt tfelntkfge
      541 ykteiiqkdn nnliykrsif ikkgiyknte ydefrlfmeq isrndnakii ltkkq
//
LOCUS       WP_235892531             137 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6153 family protein [Mycolicibacterium hodleri].
ACCESSION   WP_235892531
VERSION     WP_235892531.1
KEYWORDS    RefSeq.
SOURCE      Mycolicibacterium hodleri (Mycobacterium hodleri)
  ORGANISM  Mycolicibacterium hodleri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (residues 1 to 137)
  AUTHORS   Zhang,G., Zhang,W., Zhang,Q., Shi,T., Ma,L., Zhu,Y., Li,S.,
            Zhang,H., Zhao,Y.L., Shi,R. and Zhang,C.
  TITLE     Mechanistic insights into polycycle formation by reductive
            cyclization in ikarugamycin biosynthesis
  JOURNAL   Angew Chem Int Ed Engl 53 (19), 4840-4844 (2014)
   PUBMED   24706593
REFERENCE   2  (residues 1 to 137)
  AUTHORS   Antosch,J., Schaefers,F. and Gulder,T.A.
  TITLE     Heterologous reconstitution of ikarugamycin biosynthesis in E. coli
  JOURNAL   Angew Chem Int Ed Engl 53 (11), 3011-3014 (2014)
   PUBMED   24519911
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040012.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19650.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Mycolicibacterium hodleri"
                     /db_xref="taxon:49897"
     Protein         1..137
                     /product="DUF6153 family protein"
                     /calculated_mol_wt=14802
ORIGIN      
        1 mnvrgvaplp fvarfllfvv llggivtmha vtftlghdha aqtslaatsq hhtlgghadl
       61 adppcdahdc gqqhtglhgc vfiitaiaii aglamlcwva trrttlfapk trrsyrrrqr
      121 appwtvlslh qlsilrv
//
LOCUS       WP_235893031             119 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator, partial [Flavobacterium franklandianum].
ACCESSION   WP_235893031
VERSION     WP_235893031.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium franklandianum
  ORGANISM  Flavobacterium franklandianum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 119)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Flavobacterium franklandianum"
                     /db_xref="taxon:2594430"
     Protein         1..>119
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
     Region          9..119
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(109..112,114)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 miahqdsmhi lladddeddr tffsealqel kmnndltlfk dgkdlmdyle nplsklphvl
       61 fldlnmpgkt gldclneira nsrfkevsia iystssaekd iedtfikgan iyikkpndf
//
LOCUS       WP_235893009             225 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4372 domain-containing protein [Flavobacterium franklandianum].
ACCESSION   WP_235893009
VERSION     WP_235893009.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium franklandianum
  ORGANISM  Flavobacterium franklandianum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025652.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14294.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Flavobacterium franklandianum"
                     /db_xref="taxon:2594430"
     Protein         1..225
                     /product="DUF4372 domain-containing protein"
                     /calculated_mol_wt=25723
     Region          11..>224
                     /region_name="InsG"
                     /note="IS4 transposase InsG [Mobilome: prophages,
                     transposons]; COG3385"
                     /db_xref="CDD:442612"
ORIGIN      
        1 mgksnyfssk svfgqlisli ddkivkkavk ksdsdryvkr fkskdhlism lfcsfakcns
       61 lrevsgamlg lsgktesfql shirkrstls danknrkvef fediyntllr eygwvlsdsr
      121 iqdvlkkqvk ivdsttislf kdilscvgrk akdgkrkggi kvhtvinade kvpslvwfsp
      181 atihdhnffe klkyddntiy vfdkgyndyk afkyftdnkt gfvte
//
LOCUS       WP_235893049             152 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6943 family protein [Flavobacterium franklandianum].
ACCESSION   WP_235893049
VERSION     WP_235893049.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium franklandianum
  ORGANISM  Flavobacterium franklandianum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047099.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22105.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Flavobacterium franklandianum"
                     /db_xref="taxon:2594430"
     Protein         1..152
                     /product="DUF6943 family protein"
                     /calculated_mol_wt=18246
ORIGIN      
        1 mvarhiilkt esrpnfiikt hrkhtlytkp hlfilnkgmn sgkpqkepft nsfvvifqne
       61 edcesiyfva yslwqtkfwy qhlvgsvipf lrlpdfskef npkantmmqe heehqknmat
      121 lkfleqkekq fheninlind lrrvilyryc kk
//
LOCUS       WP_235893201             128 aa            linear   BCT 02-MAR-2025
DEFINITION  PQQ-dependent sugar dehydrogenase, partial [Acinetobacter
            baumannii].
ACCESSION   WP_235893201
VERSION     WP_235893201.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 128)
  AUTHORS   Pallanca,J.E. and Smirnoff,N.
  TITLE     Ascorbic acid metabolism in pea seedlings. A comparison of
            D-glucosone, L-sorbosone, and L-galactono-1,4-lactone as ascorbate
            precursors
  JOURNAL   Plant Physiol 120 (2), 453-462 (1999)
   PUBMED   10364396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019607.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07995.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..128
                     /product="PQQ-dependent sugar dehydrogenase"
     Region          <1..128
                     /region_name="non_repeat_PQQ"
                     /note="dehydrogenase, PQQ-dependent, s-GDH family;
                     TIGR03606"
                     /db_xref="CDD:274675"
ORIGIN      
        1 vqdtynyndp mcgdmtyicw ptvapssayv ytggkkaipg wentllvpsl krgvifrikm
       61 dqtysttydd aipmfksnnr yrdvianpeg ntlyvltdpe gnvqkddgsv tnqlenpgal
      121 ikftykak
//
LOCUS       WP_235893212             205 aa            linear   BCT 02-MAR-2025
DEFINITION  SOS response-associated peptidase family protein, partial
            [Acinetobacter baumannii].
ACCESSION   WP_235893212
VERSION     WP_235893212.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 205)
  AUTHORS   Aravind,L., Anand,S. and Iyer,L.M.
  TITLE     Novel autoproteolytic and DNA-damage sensing components in the
            bacterial SOS response and oxidized methylcytosine-induced
            eukaryotic DNA demethylation systems
  JOURNAL   Biol Direct 8, 20 (2013)
   PUBMED   23945014
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014626.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02586.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..205
                     /product="SOS response-associated peptidase family
                     protein"
                     /GO_function="GO:0003697 - single-stranded DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006974 - DNA damage response [Evidence
                     IEA]"
     Region          15..185
                     /region_name="SRAP"
                     /note="SOS response associated peptidase (SRAP); cl03646"
                     /db_xref="CDD:470848"
ORIGIN      
        1 qlqlpvvgfs yadevypggt mpllfkspqg fewrevmfgl vpkwaedtni akhtynarhe
       61 tifqkpsfqe aalkckfgvi pvtefyesky indkperwgv rrkdgqaffi aaiyeickmn
      121 etivrsasml tmdaidhpmm kdfhepgdvk rsviviphdr ldewlsletp dissfiegfp
      181 veefeclhvp kekiikptpq lsmfe
//
LOCUS       WP_235893249             355 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Flavobacterium franklandianum].
ACCESSION   WP_235893249
VERSION     WP_235893249.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium franklandianum
  ORGANISM  Flavobacterium franklandianum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 355)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Flavobacterium franklandianum"
                     /db_xref="taxon:2594430"
     Protein         1..355
                     /product="AMP-binding protein"
                     /calculated_mol_wt=40360
     Region          66..348
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(66,172..173,193..198,246,258,261,272,345)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(66,106..107,150,152..153,172..173,193..198,246,258,
                     261,269..272,326)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(66..71,73..74)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(106,152..153,172,269..271,320,326)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
ORIGIN      
        1 mkhntmhqit yknihnrfkl ngihisreem fyvaycfike gkpfeqhigt flldwfdeks
       61 yielstsgtt gvpkviriek qamldsalat gdffglepgn tmlhclptny vagkmmwvrs
      121 filgldmkfv eptsnpldki desfdfcamv plqaknsltq lkqkkikkli iggvrihral
      181 eeelvklpie iyetygmtet ithiaakkig avafttlpnv tvsiddrqcl vinakkiskn
      241 divtndivkl isdtqfiweg rldniinsgg ikllpekied klskliprry fvfgkddetl
      301 gekavlyveg esfviedsvf nvlnkyeipk eiifipkfhe tatgkimrne svlsl
//
LOCUS       WP_235893251            1341 aa            linear   BCT 02-MAR-2025
DEFINITION  two-component regulator propeller domain-containing protein
            [Flavobacterium franklandianum].
ACCESSION   WP_235893251
VERSION     WP_235893251.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium franklandianum
  ORGANISM  Flavobacterium franklandianum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 1341)
  AUTHORS   Lowe,E.C., Basle,A., Czjzek,M., Firbank,S.J. and Bolam,D.N.
  TITLE     A scissor blade-like closing mechanism implicated in transmembrane
            signaling in a Bacteroides hybrid two-component system
  JOURNAL   Proc Natl Acad Sci U S A 109 (19), 7298-7303 (2012)
   PUBMED   22532667
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019135.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07494.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1341
                     /organism="Flavobacterium franklandianum"
                     /db_xref="taxon:2594430"
     Protein         1..1341
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /calculated_mol_wt=153423
     Region          2..1047
                     /region_name="COG3292"
                     /note="Periplasmic ligand-binding sensor domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:442521"
     Region          1087..1297
                     /region_name="OmpR"
                     /note="DNA-binding response regulator, OmpR family,
                     contains REC and winged-helix (wHTH) domain [Signal
                     transduction mechanisms, Transcription]; COG0745"
                     /db_xref="CDD:440508"
     Region          <1270..1338
                     /region_name="PRK13501"
                     /note="HTH-type transcriptional activator RhaR"
                     /db_xref="CDD:184092"
ORIGIN      
        1 meqldntkgl snssvnaifq dsenllwigt wdglnrydgn sfkifrpeld nenslsnqvi
       61 lkidedhtgk iwiltihgin qydkktdtfq ryyytrknkp plsesefnma ldasknvfca
      121 vkdwgigyfd gndfqllkik nfstkavekm eftltgellv lfennelyal sfktkskgki
      181 niskvrlisn girtfelmpk gkicivstsg itnlyslldn kshllpekni gniignipdg
      241 lvllsksgys ivdndgnsvi kpwlkylknq kittliqgse nviwtgtdgd gvfkmyplkk
      301 sfnliskiqv peldggivra flevdensfw vgtkgkglfr fpsnfylnae ktlhyenfnd
      361 snsaidnsvf alckgkedli figsdgngin vfdlkkskli swaeiignek cdyfkstyai
      421 yqdnegfiwl gtngygmirc kiersgeqlk vteykkyiad nrggkslssn iifsivpknq
      481 nqlwigtrlg glnlfdkksg ffhtyknisk dsqslsnndi lclqtdannr lwigtsfgln
      541 llekmnsdgk avfksftvke glpnntihgi vcdnksnlwi stnfglsnfi vneskfinyt
      601 kneglqnnef adgafyqnqk sdyvfmggik gfnyflpqki kessivpdil idkisgqnqt
      661 tpyyqglvip pdsnnppsiv lkynqnffdi elaaltftns ekckyayqlt nfdknwnfin
      721 nrriisftnv pqgnyslwik wsnsdgvwsk pvhainikik pvfwqstvai iiyailvvlf
      781 imfvlsyykk rqslsqnilf rkreealhen rltfftdiah efqtpltliv gpiqklseas
      841 nldkrnqkfv hmiqrnssrl lfltqqllef rkaeydylei takkfdlvnl ieqiaelfde
      901 waldknidyn ldipselpgw fdkdkiekiv fnlmsnafky tpingridlk fyiqdedsnq
      961 lnitivntgk gipkekldsl fdrfflsdsn rttdndlfrt giglayikkl vtvlrgaifv
     1021 ssipnesttf tillpcskaa fnekeldvea spilisqhlk nileeipsks dgipnkissl
     1081 dlledirktv livedekeih mflnellget ykiitayngi eamaileken pdiiisdvmm
     1141 plmdgvelca kikgniktch ipfimltakd svlhriegie sgansyipkp fhpdhlliri
     1201 qklieekeli fkhfsqdtli enlstlpidn eekdfikkvi elirinidne nlqslfieke
     1261 lgisnsqlyr kikqifglsp gdlirtirlk yaaellrknv ltvsevcyqs gfnnrsyfyr
     1321 efnkmytitp knyqlkyisk s
//
LOCUS       WP_235893302             181 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Staphylococcus
            carnosus].
ACCESSION   WP_235893302
VERSION     WP_235893302.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus carnosus
  ORGANISM  Staphylococcus carnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 181)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 181)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 181)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 181)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Staphylococcus carnosus"
                     /db_xref="taxon:1281"
     Protein         1..181
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=20281
     Region          1..172
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            34..41
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213179"
     Site            order(37..38,40..42,70,149..150)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:213179"
     Site            67..70
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213179"
     Site            125..134
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213179"
     Site            145..150
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213179"
     Site            153..156
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213179"
ORIGIN      
        1 mlklknvafs ypdqevlthi nltvpageli gvigesgsgk stlmdlilge lqpdqgvies
       61 stnrilpifq qatqsfnprq qlrtvieepl kyyanaenaf dqivlplmkk lnldtlllnr
      121 ypdqisggql qrfnvlrtvm lqpdilicde itasldvnae rklidilkdi hkdwcvfnsv
      181 f
//
LOCUS       WP_235893339              81 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Acinetobacter
            baumannii].
ACCESSION   WP_235893339
VERSION     WP_235893339.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..>81
                     /product="Ig-like domain-containing protein"
     Region          8..72
                     /region_name="Big_6"
                     /note="Bacterial Ig domain; pfam17936"
                     /db_xref="CDD:465576"
ORIGIN      
        1 pinatdpvsg taeagstvtv typdgttatv vagpdgswsv pnpgnlvdgd tvtatatdpa
       61 gntslpgtgt vsaditapvv a
//
LOCUS       WP_235893341             269 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase, partial [Acinetobacter baumannii].
ACCESSION   WP_235893341
VERSION     WP_235893341.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 269)
  AUTHORS   Mande,S.S., Sarfaty,S., Allen,M.D., Perham,R.N. and Hol,W.G.
  TITLE     Protein-protein interactions in the pyruvate dehydrogenase
            multienzyme complex: dihydrolipoamide dehydrogenase complexed with
            the binding domain of dihydrolipoamide acetyltransferase
  JOURNAL   Structure 4 (3), 277-286 (1996)
   PUBMED   8805537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07992.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..269
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
     Region          <1..269
                     /region_name="PRK15317"
                     /note="alkyl hydroperoxide reductase subunit F;
                     Provisional"
                     /db_xref="CDD:237942"
ORIGIN      
        1 dienftsvqk tqgpkfaaem eahvreydvd imnlqrvski tgadqtangl vevelengak
       61 lesktvilst garwremnvp geaeyrtrgv aycphcdgpl fkgkrvavig ggnsgveaai
      121 dlagivehvt lvefdtklra dqvlqnklns lpnttvimna lstevlgdgs qvtglkykdr
      181 ttdeehvvel agifvqigll pntdflkdse veltnrgeii vndrnetnvk gvfaagdctt
      241 vpykqiiiat gegakaslsa fdyiirsgq
//
LOCUS       WP_235893342             127 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase, partial [Acinetobacter
            baumannii].
ACCESSION   WP_235893342
VERSION     WP_235893342.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 127)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..127
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
     Region          <2..127
                     /region_name="OpgE"
                     /note="Phosphoethanolamine transferase for periplasmic
                     glucans OpgE, AlkP superfamily [Cell
                     wall/membrane/envelope biogenesis]; COG2194"
                     /db_xref="CDD:441797"
ORIGIN      
        1 tellnsydnt ivytdhvlsq mintlkeisk yqtglwylsd hgestgehgl ylhgspyaia
       61 psqqthvpmi mwfseswkqr nlaqvnclsq qtkqklsqdn lfpsllslld vktqvvnnkl
      121 dmlsqck
//
LOCUS       WP_235893360             406 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4960 domain-containing protein [Litoribacter populi].
ACCESSION   WP_235893360
VERSION     WP_235893360.1
KEYWORDS    RefSeq.
SOURCE      Litoribacter populi
  ORGANISM  Litoribacter populi
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Litoribacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16324.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Litoribacter populi"
                     /db_xref="taxon:2598460"
     Protein         1..406
                     /product="DUF4960 domain-containing protein"
                     /calculated_mol_wt=44276
     Region          127..400
                     /region_name="DUF4960"
                     /note="Domain of unknown function (DUF4960); pfam16324"
                     /db_xref="CDD:435277"
ORIGIN      
        1 mrkfitnpll pimllflaif sgcsedtdps pvsaelqsfr iiapveasge inhdentvtv
       61 yvpsgtalsa vqyeaevpeg asvnpashts vdlsnplqit vigrgaegre tsevytvsaf
      121 ytapyafvgk aatindleed araaanwmqe tygddfvylp asginessls nvrvifyyql
      181 evgnnvnlgs msdnrvseai snfvrnggqm llagdasqyv fninrvpssf aftetnaaag
      241 veedkspddr wgfsvvpsat sadrtghpif sglltennrv ylnnsptrev rlvwwatgpa
      301 ggeccgeiem vtnfeeqlka vklatlrhve dyfgfaaief grtdqdthad lhsnvptdfq
      361 gnilvfanti igyewetqdg spneyvdnik qltqnainyl dglyed
//
LOCUS       WP_235893288             269 aa            linear   BCT 02-MAR-2025
DEFINITION  Eco47II family restriction endonuclease [Flavobacterium
            franklandianum].
ACCESSION   WP_235893288
VERSION     WP_235893288.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium franklandianum
  ORGANISM  Flavobacterium franklandianum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 269)
  AUTHORS   Steczkiewicz,K., Muszewska,A., Knizewski,L., Rychlewski,L. and
            Ginalski,K.
  TITLE     Sequence, structure and functional diversity of PD-(D/E)XK
            phosphodiesterase superfamily
  JOURNAL   Nucleic Acids Res 40 (15), 7016-7045 (2012)
   PUBMED   22638584
REFERENCE   2  (residues 1 to 269)
  AUTHORS   Stankevicius,K., Povilionis,P., Lubys,A., Menkevicius,S. and
            Janulaitis,A.
  TITLE     Cloning and characterization of the unusual
            restriction-modification system comprising two restriction
            endonucleases and one methyltransferase
  JOURNAL   Gene 157 (1-2), 49-53 (1995)
   PUBMED   7607524
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021095.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09553.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Flavobacterium franklandianum"
                     /db_xref="taxon:2594430"
     Protein         1..269
                     /product="Eco47II family restriction endonuclease"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0009036 - type II site-specific
                     deoxyribonuclease activity [Evidence IEA]"
                     /GO_process="GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /calculated_mol_wt=30879
     Region          21..223
                     /region_name="RE_Eco47II"
                     /note="Eco47II restriction endonuclease; pfam09553"
                     /db_xref="CDD:430684"
ORIGIN      
        1 mknhyfseii lllifmknky vdfisdehfl dcvanlhkay lkaknnitkk nfytnkvdti
       61 kltfdakfnd ideesliqae ilrqidksin nsigtfheqi lggikgfeig nlsgydikak
      121 dntlfadikn khntmnsssa ealfqklsky adenkkskcy wvqilakssf celwkgeing
      181 keyshsrvyk isgdqfyall sgkdnalfql yknlpiavkd clnsveksel akensaldei
      241 kvkietskrt ildqitfeny syylgfdkl
//
LOCUS       WP_235893396             221 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxypeptidase-like regulatory domain-containing protein
            [Litoribacter populi].
ACCESSION   WP_235893396
VERSION     WP_235893396.1
KEYWORDS    RefSeq.
SOURCE      Litoribacter populi
  ORGANISM  Litoribacter populi
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Litoribacter.
REFERENCE   1  (residues 1 to 221)
  AUTHORS   Cho,K.H. and Salyers,A.A.
  TITLE     Biochemical analysis of interactions between outer membrane
            proteins that contribute to starch utilization by Bacteroides
            thetaiotaomicron
  JOURNAL   J Bacteriol 183 (24), 7224-7230 (2001)
   PUBMED   11717282
REFERENCE   2  (residues 1 to 221)
  AUTHORS   Shipman,J.A., Berleman,J.E. and Salyers,A.A.
  TITLE     Characterization of four outer membrane proteins involved in
            binding starch to the cell surface of Bacteroides thetaiotaomicron
  JOURNAL   J Bacteriol 182 (19), 5365-5372 (2000)
   PUBMED   10986238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025092.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13715.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Litoribacter populi"
                     /db_xref="taxon:2598460"
     Protein         1..221
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /calculated_mol_wt=22797
     Region          26..>194
                     /region_name="OMP_RagA_SusC"
                     /note="TonB-linked outer membrane protein, SusC/RagA
                     family; TIGR04056"
                     /db_xref="CDD:274948"
ORIGIN      
        1 mrkvllfvla flvmaanghv maqqqrvvtg tviseedgeg lpgatilvkg tsigtttdld
       61 gnfsisvpag snvliisyvg lttqeipigd rsninitlat daaqlsevvv taigierdkk
      121 algyavttvg eelitnrpea dvsrvlqgkv agvnitatng tsgagtniii rgyssatgsn
      181 qplfivdgvp fnsgtnaqhs tkgvqphqvd sliliqtisk v
//
LOCUS       WP_235893399             284 aa            linear   BCT 02-MAR-2025
DEFINITION  1-acyl-sn-glycerol-3-phosphate acyltransferase [Litoribacter
            populi].
ACCESSION   WP_235893399
VERSION     WP_235893399.1
KEYWORDS    RefSeq.
SOURCE      Litoribacter populi
  ORGANISM  Litoribacter populi
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Litoribacter.
REFERENCE   1  (residues 1 to 284)
  AUTHORS   Neuwald,A.F.
  TITLE     Barth syndrome may be due to an acyltransferase deficiency
  JOURNAL   Curr Biol 7 (8), R465-R466 (1997)
   PUBMED   9259571
REFERENCE   2  (residues 1 to 284)
  AUTHORS   Bione,S., D'Adamo,P., Maestrini,E., Gedeon,A.K., Bolhuis,P.A. and
            Toniolo,D.
  TITLE     A novel X-linked gene, G4.5. is responsible for Barth syndrome
  JOURNAL   Nat Genet 12 (4), 385-389 (1996)
   PUBMED   8630491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013702.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01553.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Litoribacter populi"
                     /db_xref="taxon:2598460"
     Protein         1..284
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /GO_function="GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=32310
     Region          22..278
                     /region_name="Acyltransf_2"
                     /note="Acyltransferase; pfam19576"
                     /db_xref="CDD:437408"
ORIGIN      
        1 melenvivvs verkekfidi ekilgdknpg lkkwlpspil kyikrivhen dintimnkhg
       61 hlqglefvda linefgveve lrgeenisle kgvifvanhp lggldgiafm hvlgkhrqdi
      121 kflvndiltn iknfeslfvp vnkhgshgrv giaaieaays gddallvfpa glvsrkqpeg
      181 ikdlewkksf iskakkyrkt iipvyidgrn sgffynlari rkmagikanv emfylademf
      241 qqrgkkviih igkpvpyqhf dssknekqwa semrdrvyqm aqdk
//
LOCUS       WP_235893401             307 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4625 domain-containing protein [Litoribacter populi].
ACCESSION   WP_235893401
VERSION     WP_235893401.1
KEYWORDS    RefSeq.
SOURCE      Litoribacter populi
  ORGANISM  Litoribacter populi
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Litoribacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026758.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15418.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Litoribacter populi"
                     /db_xref="taxon:2598460"
     Protein         1..307
                     /product="DUF4625 domain-containing protein"
                     /calculated_mol_wt=34268
     Region          17..154
                     /region_name="DUF4625"
                     /note="Domain of unknown function (DUF4625); pfam15418"
                     /db_xref="CDD:405993"
ORIGIN      
        1 mikkylllsa magvvffscd tdddmprdmd apviskaegr deirprqger maatndhmhv
       61 rfsvtdpsgi qqvrievhsg fdghthgrva qgfeplvvsr ridlngdtfy nqdghdtdiy
      121 wegenseidg tvlagpyhfg idatdihgnv tsyadnnnys stfylerpya pdmqitnldg
      181 delegepgea lsvqgtvhrr dhqlssditf lwvrlveede hdddddhghg edvyeemwgq
      241 stwrqhsngn wyggdalpsg asinladvlt genaivlpag dhhyeliiwa edangnvtrr
      301 ayevhah
//
LOCUS       WP_235893410             368 aa            linear   BCT 02-MAR-2025
DEFINITION  family 16 glycosylhydrolase [Litoribacter populi].
ACCESSION   WP_235893410
VERSION     WP_235893410.1
KEYWORDS    RefSeq.
SOURCE      Litoribacter populi
  ORGANISM  Litoribacter populi
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Litoribacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012925.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00722.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Litoribacter populi"
                     /db_xref="taxon:2598460"
     Protein         1..368
                     /product="family 16 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=41086
     Region          <59..91
                     /region_name="PKD"
                     /note="PKD domain; pfam00801"
                     /db_xref="CDD:395646"
     Region          120..367
                     /region_name="BglS"
                     /note="Beta-glucanase, GH16 family [Carbohydrate transport
                     and metabolism]; COG2273"
                     /db_xref="CDD:441874"
ORIGIN      
        1 mkliiivfll ltgvngcqqq esdegvtlps dltvqveelg ngkvkavfsa rdvnffridf
       61 geakadmqra egreathsyr spgnytitvq ahtteddfit edtqieiteq alglgipteg
      121 yespeayegy tlvwsdefke aispdwtfet gdgcpslcgw gnnelqfyrr enaevkdgml
      181 iitakeenfg gknytstrmk tqgkqsftfg ridfravlpk gqgiwpafwm lgesiteigw
      241 pacgeidime mvggnangrd ntthgtlhws nngtyatagg kkslpegvln dnfhvfsiiw
      301 dekkitwlld geeyhtidit pdhmdefrdp qfilinlaig gnwpgspdds tifpqqlvvd
      361 yvrvfqkd
//
LOCUS       WP_235893406             995 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 N-terminal domain-containing protein
            [Litoribacter populi].
ACCESSION   WP_235893406
VERSION     WP_235893406.1
KEYWORDS    RefSeq.
SOURCE      Litoribacter populi
  ORGANISM  Litoribacter populi
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Litoribacter.
REFERENCE   1  (residues 1 to 995)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00933.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..995
                     /organism="Litoribacter populi"
                     /db_xref="taxon:2598460"
     Protein         1..995
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=111705
     Region          52..>420
                     /region_name="BglX"
                     /note="Periplasmic beta-glucosidase and related
                     glycosidases [Carbohydrate transport and metabolism];
                     COG1472"
                     /db_xref="CDD:441081"
     Region          598..986
                     /region_name="AmpC"
                     /note="CubicO group peptidase, beta-lactamase class C
                     family [Defense mechanisms]; COG1680"
                     /db_xref="CDD:441286"
ORIGIN      
        1 mrifykafpl mlmlvliqlm tasvlmaqqe eyqkpvflnq esdwadsvfn tmteeeriaq
       61 limipvysnk dqvhidsisn lvkehkvggl iffqggpvrq aqmtnrfqqe skiplmitid
      121 aewglamrld stmrfpyqms lggiedeeli yemgreiarh ckrmgihvnf apvvdinnna
      181 nnpvigfrsf gedkenvark giaymkgmqd egilanakhf pghgdtnvds hyglpvihfs
      241 kqrltelely pfrelfkegl gsimvahmsi ptldptenla stlstpivte llkdemgyeg
      301 lvftdalnmq gvakfyepgv vdvkallagn dmllntmdvk ntikevkkal engeitmeei
      361 drrvmkvlka khwlgmdemr pietenlied lnspeaefln rklteasltl lknkddiipi
      421 knlgeqkiaa maigtdnttq fqkglerytk verfflspna sleeiadmke klkdyttvlv
      481 gvhklqlkag gsnfgvtsnv nlflkelieq qptvitifgn vyslekfegl akahgviaay
      541 qetdmaqeva sqlifggiga kgklpvnvss qfkigdgltt qggfrigyss peefglvsnd
      601 fnkieelihe aieqkatpga qvlvakegkv iyhkafghht yddeqevhld dlydlasltk
      661 isttlaalmk lkgegkfden qtlgtylpma qgtnkenliy sdilthqagl qawipfwknt
      721 vrksgkfkwf tfksdssrrf piksadqlyi hrnyarkiyk eimhspiler gkyvysdlsf
      781 ilaprvvesi tgeeftayld enifspigat nltfnpykty pldrivatey dslfrkqllk
      841 gtihdegaam fggvsghagl fgtandlakl lqlylqdgey ggeeiiksnv vseysrcvhc
      901 edgnyramgf drpnrpgdpk gntapsapat sfghtgftgt ygwvdpenqi vyvflsnrvh
      961 ptrentqlyk lntrtnvmqv iyeamesaae qkasf
//
LOCUS       WP_235893428             110 aa            linear   BCT 02-MAR-2025
DEFINITION  HipA N-terminal domain-containing protein [Litoribacter populi].
ACCESSION   WP_235893428
VERSION     WP_235893428.1
KEYWORDS    RefSeq.
SOURCE      Litoribacter populi
  ORGANISM  Litoribacter populi
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Litoribacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025041.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13657.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Litoribacter populi"
                     /db_xref="taxon:2598460"
     Protein         1..110
                     /product="HipA N-terminal domain-containing protein"
                     /calculated_mol_wt=12307
     Region          8..104
                     /region_name="Couple_hipA"
                     /note="HipA N-terminal domain; cl11853"
                     /db_xref="CDD:448350"
ORIGIN      
        1 manriakvym hdalagwlvq ddtgyhftya sdylarenve pisltlplqs vpfdsltmfp
       61 ffdglipegw lldiaeknwk ldsrdrmgll rlcckdtiga vsivpergeg
//
LOCUS       WP_235893426             150 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5675 family protein [Litoribacter populi].
ACCESSION   WP_235893426
VERSION     WP_235893426.1
KEYWORDS    RefSeq.
SOURCE      Litoribacter populi
  ORGANISM  Litoribacter populi
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Litoribacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040141.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18925.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Litoribacter populi"
                     /db_xref="taxon:2598460"
     Protein         1..150
                     /product="DUF5675 family protein"
                     /calculated_mol_wt=17045
     Region          6..123
                     /region_name="DUF5675"
                     /note="Family of unknown function (DUF5675); pfam18925"
                     /db_xref="CDD:465915"
ORIGIN      
        1 malqlhlere ywpagtngtl tlddyklgkf ielpwrrnrp nvscipegvy kltkrysekw
       61 gwhvevkdvp nrslilihpa ndalqhlrgc lapvskitge gkgsqsrvaf ekfkemvyaa
      121 idggeevile irsypdaaln lsqyelswmd
//
LOCUS       WP_235893502             601 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase [Litoribacter populi].
ACCESSION   WP_235893502
VERSION     WP_235893502.1
KEYWORDS    RefSeq.
SOURCE      Litoribacter populi
  ORGANISM  Litoribacter populi
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Litoribacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012371.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00144.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Litoribacter populi"
                     /db_xref="taxon:2598460"
     Protein         1..601
                     /product="serine hydrolase"
                     /calculated_mol_wt=68054
     Region          55..364
                     /region_name="AmpC"
                     /note="CubicO group peptidase, beta-lactamase class C
                     family [Defense mechanisms]; COG1680"
                     /db_xref="CDD:441286"
     Region          406..497
                     /region_name="DUF3471"
                     /note="Domain of unknown function (DUF3471); pfam11954"
                     /db_xref="CDD:432217"
ORIGIN      
        1 mkkigvllgl lvgfnfsvms qdkrleglee elekvletwq apgfsvvvvd kdkviyskgf
       61 gyrdyenqlp atpqtlyaig ssskaftsal mgklrdegkl kledspikhi pelqfknnel
      121 nnmvtirdlm thrtglprhd iswylfstds rdslvqriah hepfakvret wyynnfmyll
      181 qgviseklyg kswedniaeq ffeplgmsss takidglkng keaafgyklk ndsivtkmdy
      241 ydiaamgpag sinsnvedls kwlitwingg kyndeqilsp gyiqeaisph mvmssgppta
      301 dqpdlhlssy gygwmvssyk ghyrvehggn idgfsanvaf yptdsvgiav lvnqngssvp
      361 nivrniisdk mlsvestdwn nlikeradka kaeqdsvqvs msssqkrgtk pthnlrefeg
      421 dytnpgygkf tievqndsly aktkkesmwl khvhynvfmp ypvenglpdt lemsplrlnf
      481 rigdsgdisa ltvkleptvd alefrrkpke vevdtekmke yegeyslggq tirfylkegd
      541 dstlylfvpg qpeydllaie edtftlkive gfkirfdrde edkineavfe qpngtfrakr
      601 k
//
LOCUS       WP_235893531             416 aa            linear   BCT 02-MAR-2025
DEFINITION  TrbI/VirB10 family protein [Cognatilysobacter lacus].
ACCESSION   WP_235893531
VERSION     WP_235893531.1
KEYWORDS    RefSeq.
SOURCE      Cognatilysobacter lacus
  ORGANISM  Cognatilysobacter lacus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Cognatilysobacter.
REFERENCE   1  (residues 1 to 416)
  AUTHORS   Alt-Morbe,J., Stryker,J.L., Fuqua,C., Li,P.L., Farrand,S.K. and
            Winans,S.C.
  TITLE     The conjugal transfer system of Agrobacterium tumefaciens
            octopine-type Ti plasmids is closely related to the transfer system
            of an IncP plasmid and distantly related to Ti plasmid vir genes
  JOURNAL   J Bacteriol 178 (14), 4248-4257 (1996)
   PUBMED   8763954
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015688.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03743.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Cognatilysobacter lacus"
                     /db_xref="taxon:1643323"
     Protein         1..416
                     /product="TrbI/VirB10 family protein"
                     /calculated_mol_wt=43642
     Region          <81..>203
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          218..413
                     /region_name="T4SS_VirB10"
                     /note="type IV secretion system protein VirB10; NF038091"
                     /db_xref="CDD:468345"
ORIGIN      
        1 mtqtvsnpye qdavaempad amanpymhar haaapdldaa apslrseeqq rvnrkalmfl
       61 ggiilllaim ailvfkgtgt kadaakpade qvsiptlsds sapplpqtra vaqpidvqpt
      121 qetslpplpp qpayantmps aapgldppmq qqghvptlle rrtgaqqdpm aaaggsppna
      181 yaqavamtqa alagqggaqk hddvdgatgd aatratsarg lrkpdallvr gtmlrcvlet
      241 riiseadgft sciltepvys ingrslllpr gskiygtyka rpkgnrievv wdrvttpngi
      301 dvnmaspgvd plgsagyagm ldshwgtrit savmisllsd afkyaaaeng pstatvsqgv
      361 viqspyesnt artldrlahq aadeamsrpp tvtinqgslv svyiardvdf sevlgr
//
LOCUS       WP_235893660             149 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Cognatilysobacter lacus].
ACCESSION   WP_235893660
VERSION     WP_235893660.1
KEYWORDS    RefSeq.
SOURCE      Cognatilysobacter lacus
  ORGANISM  Cognatilysobacter lacus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Cognatilysobacter.
REFERENCE   1  (residues 1 to 149)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 149)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Cognatilysobacter lacus"
                     /db_xref="taxon:1643323"
     Protein         1..149
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=15678
     Region          10..147
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
     Site            order(85..87,97..98)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
ORIGIN      
        1 mqessdgiri rdasigdasd vapllealgy pcdrdgaadr iaavlsdprq rlllaeiagh
       61 vcgmvgmelr yslargaeqa ritalvvapa cerqgvgrrl lrevegiarq agaarievta
      121 agsrgnahtf yrscgyddas lhfakllgd
//
LOCUS       WP_235893680             143 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-hairpin-helix domain-containing protein, partial
            [Cognatilysobacter lacus].
ACCESSION   WP_235893680
VERSION     WP_235893680.1
KEYWORDS    RefSeq.
SOURCE      Cognatilysobacter lacus
  ORGANISM  Cognatilysobacter lacus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Cognatilysobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Cognatilysobacter lacus"
                     /db_xref="taxon:1643323"
     Protein         <1..143
                     /product="helix-hairpin-helix domain-containing protein"
     Region          <1..135
                     /region_name="uvrC"
                     /note="excinuclease ABC subunit UvrC; PRK00558"
                     /db_xref="CDD:234792"
ORIGIN      
        1 qvaqaravld elgvegvqlv gvakgperrp gdedlllpdg rcvhpgaqsp alqlvqqvrd
       61 eahrfaitgh rgkrqkvrat srlediagig prrrasllkh fgglgglkga gveeiarveg
      121 vnaalaqriy dtlhglapsg gae
//
LOCUS       WP_235893699              77 aa            linear   BCT 02-MAR-2025
DEFINITION  disulfide bond formation protein B, partial [Acinetobacter
            baumannii].
ACCESSION   WP_235893699
VERSION     WP_235893699.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 77)
  AUTHORS   Jander,G., Martin,N.L. and Beckwith,J.
  TITLE     Two cysteines in each periplasmic domain of the membrane protein
            DsbB are required for its function in protein disulfide bond
            formation
  JOURNAL   EMBO J 13 (21), 5121-5127 (1994)
   PUBMED   7957076
REFERENCE   2  (residues 1 to 77)
  AUTHORS   Bardwell,J.C., Lee,J.O., Jander,G., Martin,N., Belin,D. and
            Beckwith,J.
  TITLE     A pathway for disulfide bond formation in vivo
  JOURNAL   Proc Natl Acad Sci U S A 90 (3), 1038-1042 (1993)
   PUBMED   8430071
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014639.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02600.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..77
                     /product="disulfide bond formation protein B"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006457 - protein folding [Evidence IEA]"
     Region          <1..54
                     /region_name="PRK02110"
                     /note="disulfide bond formation protein B; Provisional;
                     cl00649"
                     /db_xref="CDD:469857"
ORIGIN      
        1 pdqvpscgpg lnylidalpm ktvlqevlsg sgecaaidwt flgqslpvws layflllllv
       61 clwqlfrfyp vfktakk
//
LOCUS       WP_235893758             255 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Limnobaculum
            xujianqingii].
ACCESSION   WP_235893758
VERSION     WP_235893758.1
KEYWORDS    RefSeq.
SOURCE      Limnobaculum xujianqingii
  ORGANISM  Limnobaculum xujianqingii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Budviciaceae; Limnobaculum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Limnobaculum xujianqingii"
                     /db_xref="taxon:2738837"
     Protein         <1..>255
                     /product="Ig-like domain-containing protein"
     Region          <52..223
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 kagntgdatp vvnitvdtsg vevrldklvd nvgditgdit pngvtddtrp eivgtgkpgs
       61 iikiydgatl lgsttvnadk swsftpttdl gqgshsitvt atdlsgnttn ptsafeftid
      121 tvaptqptie sakddvgaiq gtltngmatd dptptltgka ekgsivkvyd ggallgsvva
      181 dettgqwtft ptsplvegeh kfhvtstdka gnvslpsadf vlnmdftgpd pdklkitgvd
      241 dqvgsvtgnv ahgdp
//
LOCUS       WP_235893760             683 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Limnobaculum
            xujianqingii].
ACCESSION   WP_235893760
VERSION     WP_235893760.1
KEYWORDS    RefSeq.
SOURCE      Limnobaculum xujianqingii
  ORGANISM  Limnobaculum xujianqingii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Budviciaceae; Limnobaculum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Limnobaculum xujianqingii"
                     /db_xref="taxon:2738837"
     Protein         1..>683
                     /product="Ig-like domain-containing protein"
     Region          <169..683
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 mntnasllvn sgsgasqvva vssgkpikik iqpgnkyllk nkddnyapen vtlqrngddl
       61 yvilegdsap aiviedyyvs gdntpllgma edgqvyayvi tdgsalgdgy lfndgsfapa
      121 alggmpmgdg aylfentenn dfgllalwpw flgaaviggi vgnaiyehnk ddgsspgptp
      181 asvptlsgat datgditgpi sygsttdetk ptifgtgdag niitiydngk vigsavvgad
      241 gnwsftpeta lsegahkiii tqtnpegqis spsddfifvv dtvapnkpmf ealddvgaiq
      301 gpiangattd darpeftgkg etgstitiyi dgkeagkttv gsdgtwswtp tadladghyq
      361 vtvtetdtag ntsetsptfd fnvdttapek ptiggvtdnt gsitgpinsg dvtdetrpef
      421 sgegepgsti tlkdedgnvl gtatvdedgk wtvqpeqplg egehslvvte tdkagnesdp
      481 sdpidfevdt tapakpelgs vidnegditg aikpgdetdd ktptftgege pgntitvkdg
      541 envigtaivd engawsftpe edlvdgphsi tvtetdkagn esdpsdpidf evdttapakp
      601 elgsvidneg ditgaikpgd etddktptft gegepgntit vkdgenvigt aivdengaws
      661 ftpeedlvdg phsitvtetd kag
//
LOCUS       WP_235893786             186 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase-fold protein, partial [Acinetobacter
            baumannii].
ACCESSION   WP_235893786
VERSION     WP_235893786.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Goins,C.M., Dajnowicz,S., Smith,M.D., Parks,J.M. and Ronning,D.R.
  TITLE     Mycolyltransferase from Mycobacterium tuberculosis in covalent
            complex with tetrahydrolipstatin provides insights into antigen 85
            catalysis
  JOURNAL   J Biol Chem 293 (10), 3651-3662 (2018)
   PUBMED   29352107
REFERENCE   2  (residues 1 to 186)
  AUTHORS   van Straaten,K.E., Gonzalez,C.F., Valladares,R.B., Xu,X.,
            Savchenko,A.V. and Sanders,D.A.
  TITLE     The structure of a putative S-formylglutathione hydrolase from
            Agrobacterium tumefaciens
  JOURNAL   Protein Sci 18 (10), 2196-2202 (2009)
   PUBMED   19653299
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012958.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00756.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..186
                     /product="alpha/beta hydrolase-fold protein"
     Region          <1..181
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 dlgqgagfyi natqapwseh yqmesylide lyplilksfp vnaqqvgifg hsmgghgalt
       61 lafkypekfk svsafapica ptecawgeka fshylgtdre swlahdatal vskngavfne
      121 ilvdqglddq fyeqlhpekf kqaclkagqp ltlrqhagyd hgyyfiqtfm dehlqfhaiq
      181 lekvsg
//
LOCUS       WP_235893496             416 aa            linear   BCT 02-MAR-2025
DEFINITION  CsgG/HfaB family protein [Litoribacter populi].
ACCESSION   WP_235893496
VERSION     WP_235893496.1
KEYWORDS    RefSeq.
SOURCE      Litoribacter populi
  ORGANISM  Litoribacter populi
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Litoribacter.
REFERENCE   1  (residues 1 to 416)
  AUTHORS   Loferer,H., Hammar,M. and Normark,S.
  TITLE     Availability of the fibre subunit CsgA and the nucleator protein
            CsgB during assembly of fibronectin-binding curli is limited by the
            intracellular concentration of the novel lipoprotein CsgG
  JOURNAL   Mol Microbiol 26 (1), 11-23 (1997)
   PUBMED   9383186
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03783.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Litoribacter populi"
                     /db_xref="taxon:2598460"
     Protein         1..416
                     /product="CsgG/HfaB family protein"
                     /GO_component="GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA]"
                     /calculated_mol_wt=46415
     Region          3..230
                     /region_name="CsgG"
                     /note="Curli biogenesis system outer membrane secretion
                     channel CsgG [Cell wall/membrane/envelope biogenesis];
                     COG1462"
                     /db_xref="CDD:441071"
     Region          255..408
                     /region_name="OMP_b-brl"
                     /note="Outer membrane protein beta-barrel domain;
                     pfam13505"
                     /db_xref="CDD:463903"
ORIGIN      
        1 mkkellnlpe pkepvvvavy kfrdqtgqyk etnvgaswst avtqgatnil iraleeskwf
       61 vpierenisn llnerkiirs sreqyegtnn vllppllfag vlleggiisy etniftggag
      121 vryfgsdass qyredrvsiy lravstsngk vlktvyttks ilsqevsagf fryvkfrrll
      181 eaetgytyne ptemaiteav ekavhslvle gvmgnlwelk edsdttkqli dhylteksdn
      241 vetdyigrlh rfnhrssfyv spkfttqsyi gdyssstpqt gfaasfgfgl snslyidnel
      301 gyqqvnisdv vnsreffgtt gikylanpsg klspyarvga gtyynfgnni alsnqtwfpl
      361 vnytagleyv fgnktammge ayvnqhlsdt ydgvsagsfn dlilgfkfgi kmyign
//
LOCUS       WP_235893792             297 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Acinetobacter baumannii].
ACCESSION   WP_235893792
VERSION     WP_235893792.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         1..>297
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          20..>276
                     /region_name="PRK10091"
                     /note="MFS transport protein AraJ; Provisional"
                     /db_xref="CDD:182234"
ORIGIN      
        1 maspqspsss prhyslflai fslavggfci gttefvamgl iqeiahnlki tvpeaghfis
       61 ayalgvviga piiailgakv prktlllclm lfygianact alahtpetvl vsrfiaglph
      121 gayfgvgalv aaelagpsrr asavaqmmmg ltvatvigvp latwlgqhfg wragfefsat
      181 iafftliava cfvpnipvqa tasiktelag lkninmwltl avgaigfggm fsvysyvspi
      241 lteytkvniq ivpialalwg igmvigglaa gwladknlnk tivgvlissa iafvvas
//
LOCUS       WP_235893795             210 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-binding dehydrogenase, partial [Acinetobacter baumannii].
ACCESSION   WP_235893795
VERSION     WP_235893795.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00107.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..210
                     /product="zinc-binding dehydrogenase"
     Region          <1..210
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
ORIGIN      
        1 avtnaqvkrg stvaiygagp vgllsaacak mlgaekifmv dhneyrlnya aatydaipvn
       61 fdevdaaefi iqntdnyrgv davidaigfe akgsvietvl tnlklegssg aalrqciaav
      121 rrggvvsvpg vyagpihgfl fgdafdkglt fkmgqthvhq ylpqllelie rgeltpetii
      181 thrmkledaa egyrifnere edcrkvillp
//
LOCUS       WP_235893853             299 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein
            [Oceanidesulfovibrio indonesiensis].
ACCESSION   WP_235893853
VERSION     WP_235893853.1
KEYWORDS    RefSeq.
SOURCE      Oceanidesulfovibrio indonesiensis
  ORGANISM  Oceanidesulfovibrio indonesiensis
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Oceanidesulfovibrio.
REFERENCE   1  (residues 1 to 299)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Oceanidesulfovibrio indonesiensis"
                     /db_xref="taxon:54767"
     Protein         1..299
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=31806
     Region          1..265
                     /region_name="PRK15092"
                     /note="DNA-binding transcriptional repressor LrhA;
                     Provisional"
                     /db_xref="CDD:237907"
ORIGIN      
        1 mdllqtfiav adsggftkaa eavnrtqsav sqqikrleee lgrelfhrqg ravrlsahge
       61 tllpyarril haheeafsal aqpdmtglvr lgapddyaay flpgiltrfa gafprvqvev
      121 rcdpssvllg alargevdlv vsscssssdt grviayepvv wvtsaghlah eqtpvplavf
      181 qhgclfrhwg tnalsavrre yriaysspsi ngiqaavsag lavapigvhs mppgsrvlte
      241 aegfpmlpta sivlhrnses nsevvdclae hvaegfrgps ltdappdaqp qtigccahp
//
LOCUS       WP_235893872             409 aa            linear   BCT 02-MAR-2025
DEFINITION  multiheme c-type cytochrome [Oceanidesulfovibrio indonesiensis].
ACCESSION   WP_235893872
VERSION     WP_235893872.1
KEYWORDS    RefSeq.
SOURCE      Oceanidesulfovibrio indonesiensis
  ORGANISM  Oceanidesulfovibrio indonesiensis
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Oceanidesulfovibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024839.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13447.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Oceanidesulfovibrio indonesiensis"
                     /db_xref="taxon:54767"
     Protein         1..409
                     /product="multiheme c-type cytochrome"
                     /calculated_mol_wt=46027
     Region          36..324
                     /region_name="Multi-haem_cyto"
                     /note="Seven times multi-haem cytochrome CxxCH; pfam13447"
                     /db_xref="CDD:433215"
ORIGIN      
        1 mslphtanaq eekclgchkg ispmivsdwq hsvhsevgtt cvschgseht takdtdkagl
       61 vtpetcrtch pdrveefsrg khafawdsyr amptthwqpm ilreglqgcs gchkiglkse
      121 eeiqalrdqg snygagscds chtrhlfskk eaqspqacrt chmgldhpqw emyesskhgv
      181 rhqlkvtgal penaaaptcq achmnegdha vmtgwgflgv rlpmpddeew aadrttlfkg
      241 fgvlspegep terlevlkev qalrvteeaf qeqrekmvat cgqchsesya rnelargdem
      301 irisdallae sirevaslyk dgilekpesy ayaypdllsf hdapteietq lwlmflkhrm
      361 rtfqgsfhmn pdyalwygws emvrdrnaia eraeelrrra rvmgaiete
//
LOCUS       WP_235893875             138 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Oceanidesulfovibrio indonesiensis].
ACCESSION   WP_235893875
VERSION     WP_235893875.1
KEYWORDS    RefSeq.
SOURCE      Oceanidesulfovibrio indonesiensis
  ORGANISM  Oceanidesulfovibrio indonesiensis
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Oceanidesulfovibrio.
REFERENCE   1  (residues 1 to 138)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Oceanidesulfovibrio indonesiensis"
                     /db_xref="taxon:54767"
     Protein         1..138
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=14792
     Region          1..>136
                     /region_name="AtoC"
                     /note="DNA-binding transcriptional response regulator,
                     NtrC family, contains REC, AAA-type ATPase, and a Fis-type
                     DNA-binding domains [Signal transduction mechanisms];
                     COG2204"
                     /db_xref="CDD:441806"
ORIGIN      
        1 mkqtvlvidd almiremlrk vlesegldvi easdgeealr vadehrpdic ivdvflpkrg
       61 glsvmselak rigagriiai tggenfdaqt vlelaqplev adalakpidi nkllnsvrri
      121 lpdarprsgn ngdspana
//
LOCUS       WP_235893944             163 aa            linear   BCT 02-MAR-2025
DEFINITION  MauE/DoxX family redox-associated membrane protein
            [Oceanidesulfovibrio indonesiensis].
ACCESSION   WP_235893944
VERSION     WP_235893944.1
KEYWORDS    RefSeq.
SOURCE      Oceanidesulfovibrio indonesiensis
  ORGANISM  Oceanidesulfovibrio indonesiensis
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Oceanidesulfovibrio.
REFERENCE   1  (residues 1 to 163)
  AUTHORS   van der Palen,C.J., Reijnders,W.N., de Vries,S., Duine,J.A. and van
            Spanning,R.J.
  TITLE     MauE and MauD proteins are essential in methylamine metabolism of
            Paracoccus denitrificans
  JOURNAL   Antonie Van Leeuwenhoek 72 (3), 219-228 (1997)
   PUBMED   9403107
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018942.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07291.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Oceanidesulfovibrio indonesiensis"
                     /db_xref="taxon:54767"
     Protein         1..163
                     /product="MauE/DoxX family redox-associated membrane
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0030416 - methylamine metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=18092
     Region          11..>140
                     /region_name="DoxX"
                     /note="cl21527"
                     /db_xref="CDD:451291"
ORIGIN      
        1 mrrmadmlrr fitsprlala lrlylggvfi yaslykinya gefaetiasy qlvpywgvng
       61 lavfmpwlef iagsllvvgi rskaaagiiv gllvvftiai gsalardlpm gcgcfhslee
      121 pmdwttlvrd ivwlamsiqv ycydsllqld rhlvaglrrr mpa
//
LOCUS       WP_235893989             329 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphate/phosphite/phosphonate ABC transporter substrate-binding
            protein [Oceanidesulfovibrio indonesiensis].
ACCESSION   WP_235893989
VERSION     WP_235893989.1
KEYWORDS    RefSeq.
SOURCE      Oceanidesulfovibrio indonesiensis
  ORGANISM  Oceanidesulfovibrio indonesiensis
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Oceanidesulfovibrio.
REFERENCE   1  (residues 1 to 329)
  AUTHORS   Metcalf,W.W. and Wanner,B.L.
  TITLE     Evidence for a fourteen-gene, phnC to phnP locus for phosphonate
            metabolism in Escherichia coli
  JOURNAL   Gene 129 (1), 27-32 (1993)
   PUBMED   8335257
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11461398
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Oceanidesulfovibrio indonesiensis"
                     /db_xref="taxon:54767"
     Protein         1..329
                     /product="phosphate/phosphite/phosphonate ABC transporter
                     substrate-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=36535
     Region          68..321
                     /region_name="PhnD"
                     /note="ABC-type phosphate/phosphonate transport system,
                     periplasmic component [Inorganic ion transport and
                     metabolism]; COG3221"
                     /db_xref="CDD:442454"
ORIGIN      
        1 mtqkysnflp pfrcalllla vllllacgvy gcsdlpgemd dtpvrkvdld nrreilipsp
       61 eeavtyaylp qyshttsyar hrllteylsr etglnirqvf pdtfeehvam vargeidisy
      121 snpmvylrla dmgayafarv veasgkpsfr gqiiaradne eirtlrdcvg krwiavdpds
      181 aggflfvlgh fmmngilpgd fksidfapgp ggkqekvams vyagtydfgs iregtldvva
      241 dkidisrlri vdqtrsypgw vyaarkdldp dvvdkianam fsldkskaqd alilgaadie
      301 niipaqdedy eptrelrirl gqlafdatd
//
LOCUS       WP_235894043             318 aa            linear   BCT 02-MAR-2025
DEFINITION  nitroreductase family protein [Oceanidesulfovibrio indonesiensis].
ACCESSION   WP_235894043
VERSION     WP_235894043.1
KEYWORDS    RefSeq.
SOURCE      Oceanidesulfovibrio indonesiensis
  ORGANISM  Oceanidesulfovibrio indonesiensis
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Oceanidesulfovibrio.
REFERENCE   1  (residues 1 to 318)
  AUTHORS   de Oliveira,I.M., Henriques,J.A. and Bonatto,D.
  TITLE     In silico identification of a new group of specific bacterial and
            fungal nitroreductases-like proteins
  JOURNAL   Biochem Biophys Res Commun 355 (4), 919-925 (2007)
   PUBMED   17331467
REFERENCE   2  (residues 1 to 318)
  AUTHORS   Hecht,H.J., Erdmann,H., Park,H.J., Sprinzl,M. and Schmid,R.D.
  TITLE     Crystal structure of NADH oxidase from Thermus thermophilus
  JOURNAL   Nat Struct Biol 2 (12), 1109-1114 (1995)
   PUBMED   8846223
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013077.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00881.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Oceanidesulfovibrio indonesiensis"
                     /db_xref="taxon:54767"
     Protein         1..318
                     /product="nitroreductase family protein"
                     /calculated_mol_wt=34507
     Region          13..74
                     /region_name="DsrA"
                     /note="Dissimilatory sulfite reductase (desulfoviridin),
                     alpha and beta subunits [Inorganic ion transport and
                     metabolism]; COG2221"
                     /db_xref="CDD:441823"
     Region          110..287
                     /region_name="Nitro_FMN_reductase"
                     /note="nitroreductase family protein; cl00514"
                     /db_xref="CDD:444950"
     Site            order(112,114,132,134..135,137,140..141,143,145,147,
                     149..154,243,245..246,249..250,253..254,266..267,282)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:380311"
     Site            order(114,116,118,144,266..267)
                     /site_type="other"
                     /note="FMN binding site [chemical binding]"
                     /db_xref="CDD:380311"
ORIGIN      
        1 mtsmrstilr kqaafpgavt tvvdqetcig cgmcvrvcps rtlsmvdgka avtgdaslqc
       61 ghceavcpvg avrvgaldre lesfsafrae rewfapgagg pdevrrlvql masrrscrny
      121 taepvsreml ddlvkiavta psgtnsqrwt ftvlptrgav hklgeriaqf feklnamaek
      181 pwmrkglklv grgeledyyq syygavkqal eewreqdvdr lfhgapaail vgvspgascp
      241 hedcllatqn milgahamgl gtcligyava amkedkrial dlglhkdevv havvavghpd
      301 ekyrtvsgrl tplvrmve
//
LOCUS       WP_235894055             174 aa            linear   BCT 02-MAR-2025
DEFINITION  cyclophilin-like fold protein [Oceanidesulfovibrio indonesiensis].
ACCESSION   WP_235894055
VERSION     WP_235894055.1
KEYWORDS    RefSeq.
SOURCE      Oceanidesulfovibrio indonesiensis
  ORGANISM  Oceanidesulfovibrio indonesiensis
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Oceanidesulfovibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037716.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18050.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Oceanidesulfovibrio indonesiensis"
                     /db_xref="taxon:54767"
     Protein         1..174
                     /product="cyclophilin-like fold protein"
                     /calculated_mol_wt=19351
     Region          20..109
                     /region_name="Cyclophil_like2"
                     /note="Cyclophilin-like family; cl41962"
                     /db_xref="CDD:477883"
     Region          119..>155
                     /region_name="Cyclophil_like2"
                     /note="Cyclophilin-like family; cl41962"
                     /db_xref="CDD:477883"
ORIGIN      
        1 myrfwlpalw sslwsfaxxt saakefyeql pleldltnfr daqwmfyppe klnvtareay
       61 hdgkkgelsy yapwgdvfml ykdfyagdem hrlgigltgi deiadmsgsa viqklgsnts
      121 geettmqmtv nangktivfe lndstaarel ynqlpxrktl rpelspnmhp gets
//
LOCUS       WP_235894069              77 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Oceanidesulfovibrio indonesiensis].
ACCESSION   WP_235894069
VERSION     WP_235894069.1
KEYWORDS    RefSeq.
SOURCE      Oceanidesulfovibrio indonesiensis
  ORGANISM  Oceanidesulfovibrio indonesiensis
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Oceanidesulfovibrio.
REFERENCE   1  (residues 1 to 77)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 77)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 77)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 77)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Oceanidesulfovibrio indonesiensis"
                     /db_xref="taxon:54767"
     Protein         <1..77
                     /product="ATP-binding protein"
     Region          <1..74
                     /region_name="HATPase"
                     /note="Histidine kinase-like ATPase domain; cl00075"
                     /db_xref="CDD:469604"
     Site            order(5,7,9,11,39..42,58,60,65..66,68)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340391"
     Site            order(21,42)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340391"
ORIGIN      
        1 vlftvsdtgi gipdhffgel fetftqaean srrnyqgagl glviskklvd lmvgtitees
       61 eegsgttfnv tvpfelc
//
LOCUS       WP_235894073              60 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Oceanidesulfovibrio
            indonesiensis].
ACCESSION   WP_235894073
VERSION     WP_235894073.1
KEYWORDS    RefSeq.
SOURCE      Oceanidesulfovibrio indonesiensis
  ORGANISM  Oceanidesulfovibrio indonesiensis
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Oceanidesulfovibrio.
REFERENCE   1  (residues 1 to 60)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..60
                     /organism="Oceanidesulfovibrio indonesiensis"
                     /db_xref="taxon:54767"
     Protein         <1..60
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..>52
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
ORIGIN      
        1 sqaistmqsi evasakigdi tsvidgiafq tnilalnasv eaaragdhgr gfvgrcgrga
//
LOCUS       WP_235894074             185 aa            linear   BCT 02-MAR-2025
DEFINITION  thioesterase domain-containing protein, partial
            [Oceanidesulfovibrio indonesiensis].
ACCESSION   WP_235894074
VERSION     WP_235894074.1
KEYWORDS    RefSeq.
SOURCE      Oceanidesulfovibrio indonesiensis
  ORGANISM  Oceanidesulfovibrio indonesiensis
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Oceanidesulfovibrio.
REFERENCE   1  (residues 1 to 185)
  AUTHORS   Schneider,A. and Marahiel,M.A.
  TITLE     Genetic evidence for a role of thioesterase domains, integrated in
            or associated with peptide synthetases, in non-ribosomal peptide
            biosynthesis in Bacillus subtilis
  JOURNAL   Arch Microbiol 169 (5), 404-410 (1998)
   PUBMED   9560421
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013166.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00975.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Oceanidesulfovibrio indonesiensis"
                     /db_xref="taxon:54767"
     Protein         1..>185
                     /product="thioesterase domain-containing protein"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <1..184
                     /region_name="entF"
                     /note="enterobactin non-ribosomal peptide synthetase EntF;
                     PRK10252"
                     /db_xref="CDD:236668"
ORIGIN      
        1 mvastvnklg alldsqmsde qaqrlgyetl lplrqshgpt lfcfhpasgf awqfsvlary
       61 lgprwsimgi qsprpegpmq qcadldgvie hhlktlrarq pqgpyylfgy slggtlaqgi
      121 aarlreqgee vkflglldtw ppetqnwsek eangldpavl aeiererqaf iaaqqgqgss
      181 elfnp
//
LOCUS       WP_235894084             188 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein, partial [Acinetobacter baumannii].
ACCESSION   WP_235894084
VERSION     WP_235894084.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 188)
  AUTHORS   Gao,G., Nara,T., Nakajima-Shimada,J. and Aoki,T.
  TITLE     Novel organization and sequences of five genes encoding all six
            enzymes for de novo pyrimidine biosynthesis in Trypanosoma cruzi
  JOURNAL   J Mol Biol 285 (1), 149-161 (1999)
   PUBMED   9878395
REFERENCE   2  (residues 1 to 188)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
REFERENCE   3  (residues 1 to 188)
  AUTHORS   Nygaard,P., Duckert,P. and Saxild,H.H.
  TITLE     Role of adenine deaminase in purine salvage and nitrogen metabolism
            and characterization of the ade gene in Bacillus subtilis
  JOURNAL   J Bacteriol 178 (3), 846-853 (1996)
   PUBMED   8550522
REFERENCE   4  (residues 1 to 188)
  AUTHORS   Lollier,M., Jaquet,L., Nedeva,T., Lacroute,F., Potier,S. and
            Souciet,J.L.
  TITLE     As in Saccharomyces cerevisiae, aspartate transcarbamoylase is
            assembled on a multifunctional protein including a
            dihydroorotase-like cryptic domain in Schizosaccharomyces pombe
  JOURNAL   Curr Genet 28 (2), 138-149 (1995)
   PUBMED   8590465
REFERENCE   5  (residues 1 to 188)
  AUTHORS   Jabri,E., Carr,M.B., Hausinger,R.P. and Karplus,P.A.
  TITLE     The crystal structure of urease from Klebsiella aerogenes
  JOURNAL   Science 268 (5213), 998-1004 (1995)
   PUBMED   7754395
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01979.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         1..>188
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
     Region          5..>188
                     /region_name="PRK09228"
                     /note="guanine deaminase; Provisional"
                     /db_xref="CDD:236419"
ORIGIN      
        1 mslianttvv rgrfldiqqt vsepadipnq vryledgvli sehgkikwfg awedaqqhlp
       61 agvevqhype qlivpgfidt hihfpqtemv gaygeqllsw lntytfptei qfqdktyase
      121 iaqffvqell khgtttalvf ctvhpvsvda lfeaaervqm rliagkvlmd rnapealcdt
      181 petaysdt
//
LOCUS       WP_235894094             254 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Acinetobacter
            baumannii].
ACCESSION   WP_235894094
VERSION     WP_235894094.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..>254
                     /product="Ig-like domain-containing protein"
     Region          27..106
                     /region_name="Big_13"
                     /note="Bacterial Ig-like domain; pfam19077"
                     /db_xref="CDD:465968"
     Region          108..187
                     /region_name="Big_6"
                     /note="Bacterial Ig domain; pfam17936"
                     /db_xref="CDD:465576"
ORIGIN      
        1 dpagntslpg tgtvsadita pvvalddvlt ndstpaltgt vndptatvvv nvdgtdypav
       61 nngdgtwtla dntlpvladg phtitvtatd aagnvgndta vvtidtvapn apvldpinat
      121 dpvsgqaepg stvtvtypdg ttatvvagtd gswsvpnpgn lvdgdtvtat atdpagntsl
      181 pgtgtvsadi tapvvalddm ltndstpalt gtvndptatv vvnvdgtdyp avnngdgtwt
      241 ladntlpvla dgph
//
LOCUS       WP_235894095             347 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4158 domain-containing protein, partial [Acinetobacter
            baumannii].
ACCESSION   WP_235894095
VERSION     WP_235894095.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025079.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13700.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         1..>347
                     /product="DUF4158 domain-containing protein"
     Region          20..>326
                     /region_name="transpos_Tn3"
                     /note="Tn3 family transposase; NF033527"
                     /db_xref="CDD:468061"
ORIGIN      
        1 mprrsilsaa eresllalpd skddlirhyt fndtdlsiir qrrgpanrlg favqlcylrf
       61 pgvilgvdel pfppllklva dqlkvgvesw neygqreqtr rehlselqtv fgfrpftmsh
      121 yrqavqmlte lamqtdkgiv lasalighlr rqsvilpaln averasaeai tranrriyda
      181 laepladahr rrlddllkrr dngkttwlaw lrqspakpns rhmlehierl kawqaldlpt
      241 gierlvhqnr llkiareggq mtpadlakfe pqrryatlva lategmatvt deiidlhdri
      301 lgklfnaakn khqqqfqasg kainakghcc kvsdeaafcl iqrpyis
//
LOCUS       WP_235894098             130 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase, partial [Acinetobacter
            baumannii].
ACCESSION   WP_235894098
VERSION     WP_235894098.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 130)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 130)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         1..>130
                     /product="SDR family NAD(P)-dependent oxidoreductase"
     Region          4..>130
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mtklldgkva fitgsasgig leiakkfaqe gakvvisdmn aekcqetans lkergfdals
       61 apcdvtdedn ykqaieltqk tfgtvdilin nagfqhvasi eefptavfqk lvqvmltgaf
      121 igikhvfpim
//
LOCUS       WP_235894106             175 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Acinetobacter
            baumannii].
ACCESSION   WP_235894106
VERSION     WP_235894106.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..>175
                     /product="Ig-like domain-containing protein"
     Region          <1..60
                     /region_name="Big_13"
                     /note="Bacterial Ig-like domain; pfam19077"
                     /db_xref="CDD:465968"
     Region          65..148
                     /region_name="Big_13"
                     /note="Bacterial Ig-like domain; pfam19077"
                     /db_xref="CDD:465968"
ORIGIN      
        1 tvvvnvdgtd ypavnngdgt wtladntlpa ladgphtitv tatdaagnvg ndtavvtidt
       61 svpvvslddl ttndttpalt gaiddptatv vvnvdgidyp atnngdgtwt ladntlpali
      121 dgphtvtvta tdpagntatd tatltidtvp adligaitip edlngdgiln adelg
//
LOCUS       WP_235894147              28 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: SymE family type I addiction module toxin
            [Klebsiella].
ACCESSION   WP_235894147
VERSION     WP_235894147.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella
  ORGANISM  Klebsiella
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae.
REFERENCE   1  (residues 1 to 28)
  AUTHORS   Kawano,M., Aravind,L. and Storz,G.
  TITLE     An antisense RNA controls synthesis of an SOS-induced toxin evolved
            from an antitoxin
  JOURNAL   Mol Microbiol 64 (3), 738-754 (2007)
   PUBMED   17462020
REFERENCE   2  (residues 1 to 28)
  AUTHORS   Gerdes,K. and Wagner,E.G.
  TITLE     RNA antitoxins
  JOURNAL   Curr Opin Microbiol 10 (2), 117-124 (2007)
   PUBMED   17376733
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020421.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08845.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..28
                     /organism="Klebsiella"
                     /db_xref="taxon:570"
     Protein         1..28
                     /product="SymE family type I addiction module toxin"
                     /GO_component="GO:0005737 - cytoplasm [Evidence IEA]"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /GO_process="GO:0016070 - RNA metabolic process [Evidence
                     IEA]"
                     /calculated_mol_wt=2768
     Region          <1..25
                     /region_name="SymE_toxin"
                     /note="Toxin SymE, type I toxin-antitoxin system; cl07446"
                     /db_xref="CDD:385023"
ORIGIN      
        1 maeagfstdt pvivsvepgr lviepvkg
//
LOCUS       WP_235894152              85 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Acinetobacter
            baumannii].
ACCESSION   WP_235894152
VERSION     WP_235894152.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..>85
                     /product="Ig-like domain-containing protein"
     Region          <5..57
                     /region_name="Ca_tandemer"
                     /note="Ca2+-stabilized adhesin repeat; NF033510"
                     /db_xref="CDD:411149"
ORIGIN      
        1 tvndptatvv vnvdgtdypa vnngdgtwtl adntlpvlad gphtitvtat daagnagtdt
       61 avvtidttap napvldpina tdpvs
//
LOCUS       WP_235894304              65 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1799 domain-containing protein [Klebsiella michiganensis].
ACCESSION   WP_235894304
VERSION     WP_235894304.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020388.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08809.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Klebsiella michiganensis"
                     /db_xref="taxon:1134687"
     Protein         1..65
                     /product="DUF1799 domain-containing protein"
                     /calculated_mol_wt=7237
     Region          2..57
                     /region_name="DUF1799"
                     /note="Phage related hypothetical protein (DUF1799);
                     pfam08809"
                     /db_xref="CDD:400938"
ORIGIN      
        1 mwpafvvfra astqwrtspg gvigldysvl awlmrvydia devtaindiq vmervalnil
       61 nklqn
//
LOCUS       WP_235894350             961 aa            linear   BCT 02-MAR-2025
DEFINITION  triple tyrosine motif-containing protein [Flavobacterium zepuense].
ACCESSION   WP_235894350
VERSION     WP_235894350.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium zepuense
  ORGANISM  Flavobacterium zepuense
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019136.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07495.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..961
                     /organism="Flavobacterium zepuense"
                     /db_xref="taxon:2593302"
     Protein         1..961
                     /product="triple tyrosine motif-containing protein"
                     /calculated_mol_wt=110291
     Region          <19..74
                     /region_name="COG5276"
                     /note="Uncharacterized secreted protein, contains LVIVD
                     repeats, choice-of-anchor domain [Function unknown]"
                     /db_xref="CDD:444087"
     Region          52..>379
                     /region_name="COG3292"
                     /note="Periplasmic ligand-binding sensor domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:442521"
     Region          292..961
                     /region_name="COG3292"
                     /note="Periplasmic ligand-binding sensor domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:442521"
     Region          678..740
                     /region_name="Y_Y_Y"
                     /note="Y_Y_Y domain; pfam07495"
                     /db_xref="CDD:400051"
     Region          <869..959
                     /region_name="CsgD"
                     /note="DNA-binding transcriptional regulator, CsgD family
                     [Transcription]; COG2771"
                     /db_xref="CDD:442052"
ORIGIN      
        1 mkrentmlsf kktiifiiyl yigvavaqvk niglpkliny kkteygggsq nwdigqdkng
       61 nlyfantsgl lqfngtswsk stipnatvrs lkisedgkiy lggysefgyf etnkngklvy
      121 tslsklvgpn skkiidfvwk thivngevff qtfyrtyiyk dgkisvleap nrfqfsfvvn
      181 ntlyfqdied glleyrngkl vklpgteifn ntevwgllpf qknkllvvtq dkglyiydng
      241 tlkpwlcead afvkknnslg grilmdkfiv lnsvlngiii cdeegkiiqh innqkglqnn
      301 talnsfvdkt nnlwlgldng icfvnenspf tylessyglg avyasaiydg nlyvgtnqgv
      361 fshdwkksfk eesftflegt agqawnmqvi dgqlfcshnr glftinsgka gkflddkrgy
      421 lslkplpgkp gfligsnyhg faifektpsg wqfrnqiegf nisdskfctd gtnvwlrkdv
      481 ayrlklsadl rrfntvntyd sldgklkgit svqqingvvy fqsnnrffty nalndnfied
      541 kklsayfkgl pmirycfedn kgnigyfyne ssmgmlmrna nggyknvlss faplsgnlvy
      601 ffesvntidt ddifigiteg lvhynpqlqn thppkpkafi rsftyandtl vtgnmarvkd
      661 idilykfnnv kftfsspiyd npenirftyk legfdedwst rtnvpvkeyt nlregsyrml
      721 vkvvdsygvm sdptaisfdv sppyyrhpva yllyvgviaf gvyfvrrrlq akirkskyye
      781 tleqrrlyle retkikqeqy elekeierlk neqlrvkilt kdkelvnnsl qvvkknklln
      841 giihklkdid aevtdeaakl rfgklqktiv kelttdkswn nlekhirnvh fdflkrlkdk
      901 yptitpremd lstyllmnms tkeiaeimni sdggvelary rlrkkldlpr kenltgflmn
      961 i
//
LOCUS       WP_235894337             578 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Flavobacterium zepuense].
ACCESSION   WP_235894337
VERSION     WP_235894337.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium zepuense
  ORGANISM  Flavobacterium zepuense
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 578)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Flavobacterium zepuense"
                     /db_xref="taxon:2593302"
     Protein         1..578
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=65802
     Region          39..353
                     /region_name="GH43-like"
                     /note="Glycosyl hydrolase family 43 protein;
                     uncharacterized; cd08982"
                     /db_xref="CDD:350096"
     Region          352..469
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
ORIGIN      
        1 mfllgvtfgy sqhktycnpi nidygycpip nfvtqgkhra tadpvityfk geyylfstnq
       61 wgywhskdml dwkfiprkfl rpehnvydel capsvsfvnd tllvvgstht kefpiwmstk
      121 pdgdnwkelv hkfeagawdp qifwdkdkde vylyygssnl yplygvklnr ktfqpegevi
      181 pvlalnddeh gwerfgehnd ntflqpfteg afmtkhngry ylqygapgte fsgyadgvyv
      241 gssplgpfey qlfnpfsykp ggfargaghg atykdindky whistivist knnferrlgi
      301 wpagfdadgi lysntaygdy ptflpsenke hsslssfsgw mllnynkpvq vsstlggfsp
      361 nyitdedikt ywsaktsnkg eylisdlgev stinaiqiny adqdatlmgk petttghkyi
      421 iyasndgkkw svlvdksknn kdvphdyiel qkpasarylk lenlqmptgk faisgfrvfg
      481 kgagakpgtv qnfvplraea rkkgerrnvw fkwqqepqad gyviyfgksp eklygsimvy
      541 gkneyyfsgl drsdayyfai eafnangigp rseikrse
//
LOCUS       WP_235894399             133 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Flavobacterium zepuense].
ACCESSION   WP_235894399
VERSION     WP_235894399.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium zepuense
  ORGANISM  Flavobacterium zepuense
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 133)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Flavobacterium zepuense"
                     /db_xref="taxon:2593302"
     Protein         1..133
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=15511
     Region          6..118
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(110..113,115)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 meklkkilli ddnkvdnffh ervirkfdkn itvisllsge ealeylaeld saelpdlifl
       61 dinmprmngw eflqeynkfe evrkscnivv mlstsedqed kdrafeqgia adyrskplte
      121 pmlmdiakkf ifi
//
LOCUS       WP_235894446             247 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Acinetobacter baumannii].
ACCESSION   WP_235894446
VERSION     WP_235894446.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 247)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 247)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 247)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 247)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         1..>247
                     /product="ATP-binding protein"
     Region          1..>234
                     /region_name="PRK05559"
                     /note="DNA topoisomerase IV subunit B; Reviewed"
                     /db_xref="CDD:235501"
ORIGIN      
        1 mtqytaqsle vlsgldpvrr rpgmytdtsr pnhlaqevid navdealagh adkicvtvyk
       61 dgslsvedng rgmpvdihpe ygqsgieiil tklhaggkfs tdnyqfsggl hgvgisvvna
      121 lstrvevevq rqgnlyqmaf eqgepvapla vlegkapkra tgttvrfwpe akyfdspkfa
      181 lkalkhnlka kavlaaglki tyidqindek iewqfenglv dylmdelqdr eilpnpafvs
      241 sgqadra
//
LOCUS       WP_235894479             186 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Acinetobacter
            baumannii].
ACCESSION   WP_235894479
VERSION     WP_235894479.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..>186
                     /product="Ig-like domain-containing protein"
     Region          <2..171
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 qaepgstvtv typdgttatv vagtdgswsv pnpgnlvdgd tvtatatdpa gntslpgtgt
       61 vsaditapvv alddvltnds tpaltgtvnd ptatvvvnvd gvdypavnng dgtwtladnt
      121 lpaltdgpht itvtatdaag nvgndtavvt idtvapnapv ldpinatdpv sgqaepgstv
      181 tvtypd
//
LOCUS       WP_235894515             395 aa            linear   BCT 02-MAR-2025
DEFINITION  efflux RND transporter permease subunit, partial [Acinetobacter
            baumannii].
ACCESSION   WP_235894515
VERSION     WP_235894515.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 395)
  AUTHORS   Murakami,S., Nakashima,R., Yamashita,E. and Yamaguchi,A.
  TITLE     Crystal structure of bacterial multidrug efflux transporter AcrB
  JOURNAL   Nature 419 (6907), 587-593 (2002)
   PUBMED   12374972
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00873.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..395
                     /product="efflux RND transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <1..394
                     /region_name="ACR_tran"
                     /note="AcrB/AcrD/AcrF family; cl47191"
                     /db_xref="CDD:481531"
ORIGIN      
        1 nsaeaiqkra mkyfshfnna qinvtlpasv nglgqtdgld lwiqdlngqg qdfldsafrq
       61 lqaqsknyst fenfdkqstn skanlnikid qkqalanglq lsainntlss awggtyvndf
      121 idrgrikrvm iqgdaefrsk pedlynwsvr ndqnemvpfs sfanfswgga peivkrymgy
      181 salqlqadva sgsssgqamk dveqlvnqqk diglawtgls feeqkstnqa vwlylisagf
      241 iflclaalye slsipaavmt siplgvggsv ifsyifglpn dvyfqiallt tiglscknai
      301 livefaalaq ekgknaiqaa legaslrlrp ilmtslafga gviplvfaqg agavsrqeig
      361 isilggvmfg tvlvlffipv myvllrslfr skast
//
LOCUS       WP_235894518             147 aa            linear   BCT 02-MAR-2025
DEFINITION  methionine adenosyltransferase domain-containing protein, partial
            [Acinetobacter baumannii].
ACCESSION   WP_235894518
VERSION     WP_235894518.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 147)
  AUTHORS   Takusagawa,F., Kamitori,S. and Markham,G.D.
  TITLE     Structure and function of S-adenosylmethionine synthetase: crystal
            structures of S-adenosylmethionine synthetase with ADP, BrADP, and
            PPi at 28 angstroms resolution
  JOURNAL   Biochemistry 35 (8), 2586-2596 (1996)
   PUBMED   8611562
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02773.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..147
                     /product="methionine adenosyltransferase domain-containing
                     protein"
                     /GO_function="GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006556 - S-adenosylmethionine
                     biosynthetic process [Evidence IEA]"
     Region          <1..146
                     /region_name="MetK"
                     /note="S-adenosylmethionine synthetase [Coenzyme transport
                     and metabolism]; COG0192"
                     /db_xref="CDD:439962"
ORIGIN      
        1 gltgrkiivd tyggmarhgg gafsgkdpsk vdrsaayagr yvaknivaag ladkceiqvs
       61 yaigvaepts isintfgtak vsdeliiqlv rehfdlrpfg itrmlnliqp mykqtaaygh
      121 fgregsdtaf twektdkvea lkdaagl
//
LOCUS       WP_235894615              79 aa            linear   BCT 02-MAR-2025
DEFINITION  GlpM family protein, partial [Acinetobacter baumannii].
ACCESSION   WP_235894615
VERSION     WP_235894615.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 79)
  AUTHORS   Schweizer,H.P., Po,C. and Bacic,M.K.
  TITLE     Identification of Pseudomonas aeruginosa glpM, whose gene product
            is required for efficient alginate biosynthesis from various carbon
            sources
  JOURNAL   J Bacteriol 177 (16), 4801-4804 (1995)
   PUBMED   7642508
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018628.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06942.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         1..>79
                     /product="GlpM family protein"
     Region          6..>79
                     /region_name="GlpM"
                     /note="GlpM protein; cl27901"
                     /db_xref="CDD:474981"
ORIGIN      
        1 mwalflkcml gagvvliisi lskskafyia glvplfptfa liahvivfqq kgaealqkta
       61 lfglwslipy aiylaavyv
//
LOCUS       WP_235894711             383 aa            linear   BCT 02-MAR-2025
DEFINITION  4Fe-4S dicluster domain-containing protein [Candidatus
            Thermokryptus mobilis].
ACCESSION   WP_235894711
VERSION     WP_235894711.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Thermokryptus mobilis
  ORGANISM  Candidatus Thermokryptus mobilis
            Bacteria; Pseudomonadati; Candidatus Kryptoniota; Candidatus
            Thermokryptus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17179.9
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Candidatus Thermokryptus mobilis"
                     /db_xref="taxon:1643428"
     Protein         1..383
                     /product="4Fe-4S dicluster domain-containing protein"
                     /calculated_mol_wt=43191
     Region          16..383
                     /region_name="sulfite_red_A"
                     /note="sulfite reductase, subunit A; cl42879"
                     /db_xref="CDD:478536"
     Region          273..367
                     /region_name="Fer4_22"
                     /note="4Fe-4S dicluster domain; pfam17179"
                     /db_xref="CDD:465372"
ORIGIN      
        1 msvnkidfkm nqgklfylap ddlnkifehf ksrgykvigp tvvddaivyd eisdvkdlpv
       61 gvgdeqspgi yrlksrddga ffgyvvgphs wkrflyppil tlfearreng nikisecnde
      121 dvkflfvgvr aceisaimil dkvlgggqyv dpvyikrrkn tfilavncne pggncfcfst
      181 gtgpralagy divlteviln dkhyftarag sdqgeevled lgfreasqde vkeaekilse
      241 apnkftkrvd ltnvveilqs nyenplwdki aerclscgnc tmvcptcfch nvedvtdllg
      301 qvarrirrwd scftvefsyi hggsvrystm sryrqwimhk lstwknqfgm igcvgcgrci
      361 twcpvgidit egvksfkevl nki
//
LOCUS       WP_235894743             333 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleoside recognition domain-containing protein [Candidatus
            Thermokryptus mobilis].
ACCESSION   WP_235894743
VERSION     WP_235894743.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Thermokryptus mobilis
  ORGANISM  Candidatus Thermokryptus mobilis
            Bacteria; Pseudomonadati; Candidatus Kryptoniota; Candidatus
            Thermokryptus.
REFERENCE   1  (residues 1 to 333)
  AUTHORS   Hantke,K.
  TITLE     Is the bacterial ferrous iron transporter FeoB a living fossil?
  JOURNAL   Trends Microbiol 11 (5), 192-195 (2003)
   PUBMED   12781516
REFERENCE   2  (residues 1 to 333)
  AUTHORS   Loewen,S.K., Ng,A.M., Yao,S.Y., Cass,C.E., Baldwin,S.A. and
            Young,J.D.
  TITLE     Identification of amino acid residues responsible for the
            pyrimidine and purine nucleoside specificities of human
            concentrative Na(+) nucleoside cotransporters hCNT1 and hCNT2
  JOURNAL   J Biol Chem 274 (35), 24475-24484 (1999)
   PUBMED   10455109
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019292.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07670.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Candidatus Thermokryptus mobilis"
                     /db_xref="taxon:1643428"
     Protein         1..333
                     /product="nucleoside recognition domain-containing
                     protein"
                     /calculated_mol_wt=36167
     Region          147..320
                     /region_name="SpmA"
                     /note="Spore maturation protein SpmA (function unknown)
                     [General function prediction only]; COG2715"
                     /db_xref="CDD:442028"
ORIGIN      
        1 mmnyiwlali aigiltaigt diyeisvnky rngvefqavv eledefkfdt qlkgnlnvdg
       61 eyfknfyslk nfnsksigne vlvninqdgk gvaivkitet tpefwklmak gkgvntdklm
      121 anilnfekle ngkykvslvf ekisfvkmkq ilnavieysd iavkiaigli gvmalwlgim
      181 kigelaglis llakivkplt rrifpdippe hpaigaiimn isanmlglgn aatplglkam
      241 eelqklnpkk dtasdsmitf lvintsgmtl ipataiavra algsgdpaai isttivggfa
      301 atiagitsak ilqrlkifrk eleenenqke aqg
//
LOCUS       WP_235894753             150 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Candidatus Thermokryptus
            mobilis].
ACCESSION   WP_235894753
VERSION     WP_235894753.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Thermokryptus mobilis
  ORGANISM  Candidatus Thermokryptus mobilis
            Bacteria; Pseudomonadati; Candidatus Kryptoniota; Candidatus
            Thermokryptus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Candidatus Thermokryptus mobilis"
                     /db_xref="taxon:1643428"
     Protein         1..150
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=17331
     Region          10..128
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(12..14,28,44..46)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133395"
ORIGIN      
        1 mkpinkkepi fpigivaqrl gisestirmy eregliipyk kesghrlfse rdmeriecik
       61 ktiaekkisi agirrllali pcweikncpi eirnecpayv dyekpcwlhk vnlkgdcatn
      121 ecrecevyns ikscdelkel lkkylvssqv
//
LOCUS       WP_235894464             246 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: bacteriophage antitermination protein Q [Klebsiella].
ACCESSION   WP_235894464
VERSION     WP_235894464.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella
  ORGANISM  Klebsiella
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae.
REFERENCE   1  (residues 1 to 246)
  AUTHORS   Goliger,J.A. and Roberts,J.W.
  TITLE     Bacteriophage 82 gene Q and Q protein. Sequence, overproduction,
            and activity as a transcription antiterminator in vitro
  JOURNAL   J Biol Chem 262 (24), 11721-11725 (1987)
   PUBMED   3624233
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018074.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06323.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Klebsiella"
                     /db_xref="taxon:570"
     Protein         1..246
                     /product="bacteriophage antitermination protein Q"
                     /calculated_mol_wt=28911
     Region          3..229
                     /region_name="Phage_antiter_Q"
                     /note="Phage antitermination protein Q; pfam06323"
                     /db_xref="CDD:428887"
ORIGIN      
        1 mmelerirvc vatalsdlhy lqrgilevql eqlrlansgr ftdkptrviq mgesnkyeil
       61 vsaeqvhyhv gktfkqssml lteldfqtas wrraieqldr eekawlhycy gckpnfknde
      121 aicqwlwldf lvahsttdfk kmkeltkktm kkltyyaiqq vkasilrnee idhlredehi
      181 sfllnitids wrkdykkrwa lmksrclyln stallnaaek rseiinrhrt gcadlpvsad
      241 yaqetr
//
LOCUS       WP_235894769             134 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Acinetobacter
            baumannii].
ACCESSION   WP_235894769
VERSION     WP_235894769.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040192.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19078.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..>134
                     /product="Ig-like domain-containing protein"
     Region          13..98
                     /region_name="Big_12"
                     /note="Bacterial Ig-like domain; pfam19078"
                     /db_xref="CDD:436946"
     Region          100..>134
                     /region_name="Big_12"
                     /note="Bacterial Ig-like domain; pfam19078"
                     /db_xref="CDD:436946"
ORIGIN      
        1 lapapvitid pvtnaitidf geavnavdgs pltadalegl ldiangtltg lvdngdgsfs
       61 gtlvpaadfe gdvvvnvpag ivtdvagnan ltatesltvd tlapglvita ldpaltates
      121 ttisftfsea vsgf
//
LOCUS       WP_235894771             373 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Acinetobacter
            baumannii].
ACCESSION   WP_235894771
VERSION     WP_235894771.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040192.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19078.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..>373
                     /product="Ig-like domain-containing protein"
     Region          29..117
                     /region_name="Big_12"
                     /note="Bacterial Ig-like domain; pfam19078"
                     /db_xref="CDD:436946"
     Region          <215..359
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 dgshqltytl tdaagnesaq spaitvtvdt tapvltists dlvlasgeaa titfefsepv
       61 sefsvsdvvv sggvlsnfiq vdantwtaif tqsgsvapsi svadgaytdi vgntgkgdvl
      121 dgadgfifnp lavdligeit ipadinndni lnanelgadk tftaqitlgs daavgniisv
      181 nginytvvqa dldagfitae iivtvdgdls vraeardsag ntdiadttik vitvdttapi
      241 tpsaptgyld nvgpdqgikg sgsstddttp gvvisapgag etptlyvdge kvaasydpvt
      301 gtltpttpla dgshqltytl tdaagnesvq spallltvdt tapslvital dpaltatest
      361 tisftfseav sgf
//
LOCUS       WP_235894790             131 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Acinetobacter
            baumannii].
ACCESSION   WP_235894790
VERSION     WP_235894790.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..>131
                     /product="Ig-like domain-containing protein"
     Region          <35..111
                     /region_name="Big_13"
                     /note="Bacterial Ig-like domain; pfam19077"
                     /db_xref="CDD:465968"
ORIGIN      
        1 itvtatdaag nvgndtavvt idtsvpvvsl ddlttndttp altgaiddpt atvvvnvdgi
       61 dypatnngdg twtladntlp alidgphtvt vtatdpagnt atdtatltid tvpadligai
      121 tipedlngdg i
//
LOCUS       WP_235894796             112 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Acinetobacter baumannii].
ACCESSION   WP_235894796
VERSION     WP_235894796.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         1..>112
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          15..>112
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mseqtaqrqy sigwimllal ltalgplsid mylpalpqma hdfgvstqmv antlpayffg
       61 laigqlvygp lsdrigrkkp lyfglalyav aslfcvlatn ewsliaaril qa
//
LOCUS       WP_235894811             434 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Brucella pecoris].
ACCESSION   WP_235894811
VERSION     WP_235894811.1
KEYWORDS    RefSeq.
SOURCE      Brucella pecoris (Ochrobactrum pecoris)
  ORGANISM  Brucella pecoris
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Brucella pecoris"
                     /db_xref="taxon:867683"
     Protein         1..434
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=47892
     Region          7..429
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mkrlliaaml agssmlvsmt aeaktqiefw hamggvlndr vgelakqfne tqdqytvvpv
       61 nkgsyeelin amiaayrakr aptivqtner afltmlnssa vipvvdlmsk egytidwstv
      121 iapvaayysd kgklqalpfn sstpilwyne ehfkaagfdk psdnwqeltq qlhaihdkgv
      181 sqcamslpgd yewsflenys avndfpygtk rngidgidte fvfnkylgtq vermhdliss
      241 gvmeiagqgv qpvqlftsgt cstiiastas haaveasakf pwnatflphe kdrtphnsvi
      301 gggalwtmkg hsedeykgaa affdflakpe tqvwwskntg yvpvtttayd alkkegyfeq
      361 hptraiaieq lmrkpnsdns mgfrfgnsnq anvlimeevm aaalgqkttq ealdsavarg
      421 nevlrrfekl nagk
//
LOCUS       WP_235894880             238 aa            linear   BCT 02-MAR-2025
DEFINITION  adenosylcobinamide amidohydrolase [Brucella pecoris].
ACCESSION   WP_235894880
VERSION     WP_235894880.1
KEYWORDS    RefSeq.
SOURCE      Brucella pecoris (Ochrobactrum pecoris)
  ORGANISM  Brucella pecoris
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 238)
  AUTHORS   Woodson,J.D. and Escalante-Semerena,J.C.
  TITLE     CbiZ, an amidohydrolase enzyme required for salvaging the coenzyme
            B12 precursor cobinamide in archaea
  JOURNAL   Proc Natl Acad Sci U S A 101 (10), 3591-3596 (2004)
   PUBMED   14990804
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014060.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01955.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Brucella pecoris"
                     /db_xref="taxon:867683"
     Protein         1..238
                     /product="adenosylcobinamide amidohydrolase"
                     /calculated_mol_wt=24959
     Region          22..237
                     /region_name="CbiZ"
                     /note="Adenosylcobinamide amidohydrolase [Coenzyme
                     transport and metabolism]; COG1865"
                     /db_xref="CDD:441470"
ORIGIN      
        1 mdgwqalvai svpicnrsfm lpftihcsgr vlaaefshrq nilswsltrp gfvsaqsvaw
       61 levrnddltl dvdpvvllqe rlaqagygea vqmmtsrsvq khhvatrrsg etyaaclatv
      121 glsnagrvge fsqmkmpagt inllvhinnp lsvaahieam siaaeartaa iielgltvgg
      181 raatgtgtdc iavsaphgqt geaasyaglh tdigaalgga vydavseggr lwmkeqgf
//
LOCUS       WP_235894904             578 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Brucella pecoris].
ACCESSION   WP_235894904
VERSION     WP_235894904.1
KEYWORDS    RefSeq.
SOURCE      Brucella pecoris (Ochrobactrum pecoris)
  ORGANISM  Brucella pecoris
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12697.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Brucella pecoris"
                     /db_xref="taxon:867683"
     Protein         1..578
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=62698
     Region          6..233
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     Region          50..>138
                     /region_name="PldB"
                     /note="Lysophospholipase, alpha-beta hydrolase superfamily
                     [Lipid transport and metabolism]; COG2267"
                     /db_xref="CDD:441868"
     Region          289..565
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 mstvrpaasp vvfcetlglf qaplgqsldt vvvfaspwgl eelcttrkfw rviadelsah
       61 giasfrfdwp gtgdgrddid fskglelwqn tlveaarkar dlsgasrvii igqslgaava
      121 aetaaridgi aalallapvi sgrfytrela vwssmvdadl gltdaqrikn svsiasltmq
      181 pevaadvkki nllsletrpa pqclllartd rpndaelath leklgadvtv eafadydkli
      241 snpvisrlpl evadrlvdwv aglagsdpaq nkpddsalgg sltgdgfiet pvsfgsgdrl
      301 sgvicaplge rrgrtvlfls ssydrrvgwg rttvemarkl aregmaslrf dianagdspp
      361 hpgmpeqvly tqgpetdvae aldyleaigw grpvvagrcs gaflgfhsal kderisgavl
      421 vnpvtfywap ersvedavre gnrtlgdygs ralraetfqr lfrgeldira ilrnltrgiv
      481 grvrslarkv lrsrtvegra vysafdelkq revplalvya ekdtgrqhfn fyfdqagssv
      541 qgfdnvsvav ipdadhnltp ehsreiyida irslalrd
//
LOCUS       WP_235894948             144 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2195 family protein [Brucella pecoris].
ACCESSION   WP_235894948
VERSION     WP_235894948.1
KEYWORDS    RefSeq.
SOURCE      Brucella pecoris (Ochrobactrum pecoris)
  ORGANISM  Brucella pecoris
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021478.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09961.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Brucella pecoris"
                     /db_xref="taxon:867683"
     Protein         1..144
                     /product="DUF2195 family protein"
                     /calculated_mol_wt=15386
     Region          24..144
                     /region_name="DUF2195"
                     /note="Uncharacterized protein conserved in bacteria
                     (DUF2195); cl02042"
                     /db_xref="CDD:470444"
ORIGIN      
        1 mlpeadevir isarrrrslf rsfvavflca isagqaassd aveidlqngl sacadlkpgq
       61 vkrqanivsf darfnlhrsi gmcgcmsalv nytasvding irqklqqgii slaregdrtl
      121 ilasdqnlia gkdvrvelpc agpl
//
LOCUS       WP_235894938             104 aa            linear   BCT 02-MAR-2025
DEFINITION  transcriptional regulator domain-containing protein [Brucella
            pecoris].
ACCESSION   WP_235894938
VERSION     WP_235894938.1
KEYWORDS    RefSeq.
SOURCE      Brucella pecoris (Ochrobactrum pecoris)
  ORGANISM  Brucella pecoris
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 104)
  AUTHORS   Jowsey,W.J., Morris,C.R.P., Hall,D.A., Sullivan,J.T.,
            Fagerlund,R.D., Eto,K.Y., Solomon,P.D., Mackay,J.P., Bond,C.S.,
            Ramsay,J.P. and Ronson,C.W.
  TITLE     DUF2285 is a novel helix-turn-helix domain variant that
            orchestrates both activation and antiactivation of conjugative
            element transfer in proteobacteria
  JOURNAL   Nucleic Acids Res 51 (13), 6841-6856 (2023)
   PUBMED   37246713
REFERENCE   2  (residues 1 to 104)
  AUTHORS   Knittel,V., Sadana,P., Seekircher,S., Stolle,A.S., Korner,B.,
            Volk,M., Jeffries,C.M., Svergun,D.I., Heroven,A.K., Scrima,A. and
            Dersch,P.
  TITLE     RovC - a novel type of hexameric transcriptional activator
            promoting type VI secretion gene expression
  JOURNAL   PLoS Pathog 16 (9), e1008552 (2020)
   PUBMED   32966346
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040446.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20109.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Brucella pecoris"
                     /db_xref="taxon:867683"
     Protein         1..104
                     /product="transcriptional regulator domain-containing
                     protein"
                     /calculated_mol_wt=11866
     Region          1..68
                     /region_name="DUF6499"
                     /note="Family of unknown function (DUF6499); pfam20109"
                     /db_xref="CDD:437941"
ORIGIN      
        1 msedeswrse aaydyidklt pgdlaweflr rnpvyrksyq elaavgrlte dvagefadqw
       61 glrfrrrpsq lgahpadlld panrsrdtpv hrrsepggrs ppqr
//
LOCUS       WP_235894941             627 aa            linear   BCT 02-MAR-2025
DEFINITION  pilus assembly protein TadG-related protein [Brucella pecoris].
ACCESSION   WP_235894941
VERSION     WP_235894941.1
KEYWORDS    RefSeq.
SOURCE      Brucella pecoris (Ochrobactrum pecoris)
  ORGANISM  Brucella pecoris
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 627)
  AUTHORS   Tomich,M., Planet,P.J. and Figurski,D.H.
  TITLE     The tad locus: postcards from the widespread colonization island
  JOURNAL   Nat Rev Microbiol 5 (5), 363-375 (2007)
   PUBMED   17435791
REFERENCE   2  (residues 1 to 627)
  AUTHORS   Kachlany,S.C., Planet,P.J., Bhattacharjee,M.K., Kollia,E.,
            DeSalle,R., Fine,D.H. and Figurski,D.H.
  TITLE     Nonspecific adherence by Actinobacillus actinomycetemcomitans
            requires genes widespread in bacteria and archaea
  JOURNAL   J Bacteriol 182 (21), 6169-6176 (2000)
   PUBMED   11029439
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13400.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Brucella pecoris"
                     /db_xref="taxon:867683"
     Protein         1..627
                     /product="pilus assembly protein TadG-related protein"
                     /calculated_mol_wt=68729
     Region          53..>230
                     /region_name="ViaA"
                     /note="Uncharacterized conserved protein, contains a von
                     Willebrand factor type A (vWA) domain [Function unknown];
                     COG2425"
                     /db_xref="CDD:441973"
     Region          <167..>232
                     /region_name="YfbK"
                     /note="Secreted protein containing bacterial Ig-like
                     domain and vWFA domain [General function prediction only];
                     COG2304"
                     /db_xref="CDD:441879"
     Region          <411..>484
                     /region_name="ChlD"
                     /note="vWFA (von Willebrand factor type A) domain of Mg
                     and Co chelatases [Coenzyme transport and metabolism];
                     COG1240"
                     /db_xref="CDD:440853"
ORIGIN      
        1 mknwvtqvlr laqhifhrls qlmgpnlikd ergnfamita lvlvplllag miavdsanlm
       61 rvrnnvqasl daaalavgkr fstgesqavv qvygaqiftt nltalsadtv nfeiafpqdr
      121 ttdqqilata aftykslfgm vasrltgdnw dqyrytlnss vrlkntieva lvldnsgsmd
      181 etrsgstkkr idllkeaasq lvetmasqsa lithverpvq fslvpfagsv nvgpqflnat
      241 wmdpegkssv nlenftlpvt idstrkieek pagsgrfyks gtgwgernnk pfsraelysd
      301 lsqrskdtwl awqgcvesrp gtyaldvtpp sdnnpntlfv pmfgpaeyyn tdskgnvtst
      361 vlnswwqddi sltyslrqsd lkkyylrdsl dkiyrggrsk dggpnyscts lpltpltdvt
      421 seqgmktiqt aikamvpagg tnvpeamawg wrtivqgapf tearaaterg ndkvvivltd
      481 gantyykydg lagsgpdrag nlsyysahgy taritknytq arlfqesgvs vsqnnstytk
      541 amnarfaklc dnaksaniiv mtvaldlsea dstekaqidl lkscssnsrv rmesgkpvkl
      601 fwnstggels etfrqigdel snlrivg
//
LOCUS       WP_235894978             642 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Acinetobacter baumannii].
ACCESSION   WP_235894978
VERSION     WP_235894978.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 642)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 642)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 642)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 642)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..642
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          1..621
                     /region_name="PRK10636"
                     /note="putative ABC transporter ATP-binding protein;
                     Provisional"
                     /db_xref="CDD:236729"
ORIGIN      
        1 iqfdqvslrr ggrvlfqkas mqlhpgwkig ltgvngagks tlfaallgsl gadegsltrp
       61 svwtvahmaq evkaldmpai dfvlsgdeey wdiqnklaqp eqltdsdlak lhgrfdeihg
      121 ysapskaaql maglgflehq lrlnvasfsg gwrmrlnlar tlmsrsdlll ldeptnhldl
      181 dailwledwl kayegtlili shdrdfldai tdhilhienq eltlytgnys tfettrserl
      241 aqqqqafekq qearahlqkf idrfkakatk arqaqsrikq lermqqlapa hvdtpftfsf
      301 reptkmsspl ltlenasigy gdkkiaekik lqitpnsrig llgmngagks tlikslvgdl
      361 pllagerkas ellnigyfaq hqmdaldgqa spmlqlaria dkqiseatlr sflgsfgfsg
      421 ermdtpcesf sggerarlal alivwqrpnv lildeptnhl dldmrhalsm alqdfegavv
      481 lvsherqlia svcdelllvh ggkctefegd lqdyakwlre arqqqinaqt avaqnnsssa
      541 apapakvdke aqrkeaarrr eqtrpirkni ekvesqiekl qprlaeieea ladtslyean
      601 rkddllklmn eqtelkakle qyeeqllelm meleemeasf en
//
LOCUS       WP_235894980             208 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Acinetobacter baumannii].
ACCESSION   WP_235894980
VERSION     WP_235894980.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 208)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..208
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          <1..176
                     /region_name="Der"
                     /note="Double Era-like domain GTPase Der [Translation,
                     ribosomal structure and biogenesis]; COG1160"
                     /db_xref="CDD:440774"
ORIGIN      
        1 vvvvvdareg iveqdlhlig yaleagramv iainkwdnms eydrkqckld verrfdfipw
       61 arihlisalh gtgvgelyps ihrayesanl kvspakltqi lndatdqhqp ptvqgrrikm
      121 ryahmggqnp ptivihgnkv dktpadyrry lenvfrkvyk legtpvkief ktsenpfegr
      181 ksqvdertaa rrrryiqkfk kaekkfkr
//
LOCUS       WP_235894988              53 aa            linear   BCT 02-MAR-2025
DEFINITION  disulfide bond formation protein B, partial [Acinetobacter
            baumannii].
ACCESSION   WP_235894988
VERSION     WP_235894988.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 53)
  AUTHORS   Jander,G., Martin,N.L. and Beckwith,J.
  TITLE     Two cysteines in each periplasmic domain of the membrane protein
            DsbB are required for its function in protein disulfide bond
            formation
  JOURNAL   EMBO J 13 (21), 5121-5127 (1994)
   PUBMED   7957076
REFERENCE   2  (residues 1 to 53)
  AUTHORS   Bardwell,J.C., Lee,J.O., Jander,G., Martin,N., Belin,D. and
            Beckwith,J.
  TITLE     A pathway for disulfide bond formation in vivo
  JOURNAL   Proc Natl Acad Sci U S A 90 (3), 1038-1042 (1993)
   PUBMED   8430071
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014639.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02600.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..53
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..53
                     /product="disulfide bond formation protein B"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006457 - protein folding [Evidence IEA]"
     Region          <3..30
                     /region_name="PRK02110"
                     /note="disulfide bond formation protein B; Provisional;
                     cl00649"
                     /db_xref="CDD:469857"
ORIGIN      
        1 qevlsgsgec aaidwtflgq slpvwslayf lllllvclwq lfrfypvfkt akk
//
LOCUS       WP_235894998             324 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Acinetobacter
            baumannii].
ACCESSION   WP_235894998
VERSION     WP_235894998.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         1..>324
                     /product="Ig-like domain-containing protein"
     Region          9..71
                     /region_name="biofilm_BapA_N"
                     /note="BapA prefix-like domain; NF033677"
                     /db_xref="CDD:411274"
     Region          160..240
                     /region_name="Big_13"
                     /note="Bacterial Ig-like domain; pfam19077"
                     /db_xref="CDD:465968"
     Region          248..324
                     /region_name="Big_13"
                     /note="Bacterial Ig-like domain; pfam19077"
                     /db_xref="CDD:465968"
ORIGIN      
        1 mvqvslmann asknntvdin vgqtknivvd pkviakidin pekiasitrd gnsavihlkd
       61 gteivlenff isenpqilln egqiywaanl aedatgqttv nylelkeipk yidasssvpi
      121 wswvvsalag agtvallsqq dakdktppep gklsfqnlld sgeltqdqit ndnkfnlkls
      181 gqekgssvty listdegktw qqttlnqkdl adgiylykav vtdaagntse tavqkvvvdt
      241 tapqageltl sdlsdtgisa tdqitqdknf nlklegqesg srvtylvstd egktwqettl
      301 nqkdladgiy lykavvtdaa gnts
//
LOCUS       WP_235895013             132 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: helix-turn-helix domain-containing protein
            [Yersinia].
ACCESSION   WP_235895013
VERSION     WP_235895013.1
KEYWORDS    RefSeq.
SOURCE      Yersinia
  ORGANISM  Yersinia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae.
REFERENCE   1  (residues 1 to 132)
  AUTHORS   Ren,J., Sainsbury,S., Nettleship,J.E., Saunders,N.J. and Owens,R.J.
  TITLE     The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals
            a novel protein fold incorporating a helix-turn-helix motif
  JOURNAL   Proteins 78 (7), 1798-1802 (2010)
   PUBMED   20196080
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013540.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01381.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Yersinia"
                     /db_xref="taxon:629"
     Protein         1..132
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=15345
     Region          5..132
                     /region_name="PRK09706"
                     /note="transcriptional repressor DicA; Reviewed"
                     /db_xref="CDD:182039"
ORIGIN      
        1 mqglemsfen rlqqalseln msqselarrl dttsqsvsgw cngilprkdk lerlpevlgr
       61 plywfflepn dpivpelatp qgkqlseqes rlierfnrlp tsekehmisl fetkiaeydr
      121 lleeliklke qk
//
LOCUS       WP_235895044            1126 aa            linear   BCT 02-MAR-2025
DEFINITION  ImcF-related family protein [Yersinia rochesterensis].
ACCESSION   WP_235895044
VERSION     WP_235895044.1
KEYWORDS    RefSeq.
SOURCE      Yersinia rochesterensis
  ORGANISM  Yersinia rochesterensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 1126)
  AUTHORS   Das,S., Chakrabortty,A., Banerjee,R. and Chaudhuri,K.
  TITLE     Involvement of in vivo induced icmF gene of Vibrio cholerae in
            motility, adherence to epithelial cells, and conjugation frequency
  JOURNAL   Biochem Biophys Res Commun 295 (4), 922-928 (2002)
   PUBMED   12127983
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018470.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06761.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Yersinia rochesterensis"
                     /db_xref="taxon:1604335"
     Protein         1..1126
                     /product="ImcF-related family protein"
                     /calculated_mol_wt=125057
     Region          172..1108
                     /region_name="IcmF"
                     /note="Type VI protein secretion system component VasK
                     [Intracellular trafficking, secretion, and vesicular
                     transport]; COG3523"
                     /db_xref="CDD:442745"
ORIGIN      
        1 mkiktligai vsvlifltvi iaflflsmpe kmanwtgigp ldsgrlftfc lsiavalill
       61 gwliekgfer agksgvrmsf qknqqptnld eanvtlhskv itdkfsptsl tehlelrygr
      121 fwkskvrill vqgesadiek avpgltrdvw qegdgivlih agdvqsppdd tflsalkqvr
      181 prrpldgivq vldtgslpsa aerdaflrsr qktdkllgwk apiwlwltdk eygsqqerer
      241 tatgalfgag ataeeaissl delvprlrra gmaqilndtr hdwllrlssr lqgelkarlt
      301 vllnglmqga aayrlrgiml spelagasta phvrlsspaw qaivedsqna vakkitfdwl
      361 kalrllllvl aalwaagtll slsvnrtqiy qaqdtariaa dtqqplperl rnqlilqqai
      421 arlqnneakg apwytrfgln qdrdtlaalw plythnnnql mrdataehlk qqlhvfvqlp
      481 pasdartqgt qqaynqlksy lmlvhpdkad aawlsknmmv lwptregvpd gvwqslapkl
      541 lgfyaqnlpm hpdwkikpnt elistvrqil lkqigqrnae aglyqemlkr issnwpdltl
      601 admtgdtdas tlfstdavvp gmftrqawed qvqdaiaevv ktrrdeidwv ltdkthqpds
      661 emspealkar lteryftdfg nawlnmvnsi qwhaasslse aiaqlnlvad irqsplvalm
      721 ntlawqgktg qkgealadsi vdsakkligr eknsqqfvqq algprgpldg vfgpllgvme
      781 gkdgtgsngn lsfqswlarv tqvrlklqqv tsapdpqams qmlaqtvfqg kaidltdtrd
      841 ygslmaaslg qewngfgqal fvqpldlawr qvlapaagsl narwqrtive qwnkafvgry
      901 pfkstgsdas lpllaqflrs dsgrittflk tnlggilhqe gnrwvvdpaa sqgmtvnpaf
      961 lnainqlael sdivfaqgda nvhfelmarp skdvarmqlt vdeqsldyfn qmeswqsftw
     1021 pgntyypgvq lswrsvssgm rlyadnqgnw glirlldkaq atpldsgrtq lvwttqdgnt
     1081 lkfilrselg dgplallklq gfrlpesifn vepgvenleq faaede
//
LOCUS       WP_235895054             109 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: LacI family DNA-binding transcriptional regulator
            [Yersinia].
ACCESSION   WP_235895054
VERSION     WP_235895054.1
KEYWORDS    RefSeq.
SOURCE      Yersinia
  ORGANISM  Yersinia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012576.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00356.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Yersinia"
                     /db_xref="taxon:629"
     Protein         1..109
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=11610
     Region          20..>87
                     /region_name="PurR"
                     /note="DNA-binding transcriptional regulator, LacI/PurR
                     family [Transcription]; COG1609"
                     /db_xref="CDD:441217"
     Region          <88..>104
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mttsallnan vvieigiant idlakkfals astvsrtltr pekvaaatge rvmkaidelg
       61 yeanifarnl rqgesqvigl vvsdilntrh llelehtria yiggyltga
//
LOCUS       WP_235895078             337 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Acinetobacter
            baumannii].
ACCESSION   WP_235895078
VERSION     WP_235895078.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..>337
                     /product="Ig-like domain-containing protein"
     Region          9..73
                     /region_name="Big_6"
                     /note="Bacterial Ig domain; pfam17936"
                     /db_xref="CDD:465576"
     Region          85..164
                     /region_name="Big_13"
                     /note="Bacterial Ig-like domain; pfam19077"
                     /db_xref="CDD:465968"
     Region          <176..252
                     /region_name="Big_13"
                     /note="Bacterial Ig-like domain; pfam19077"
                     /db_xref="CDD:465968"
ORIGIN      
        1 dpinatdpvs gqaepgstvt vtypdgttat vvagpdgsws vpnpgnlvdg dtvtatatdp
       61 agntslpgtg tvsaditapv valddvltnd stpaltgtvn dptatvvvnv dgvdypavnn
      121 gdgtwtladn tlpaltdgph titvtatdaa gnvgndtavv tidtslpvvs lddlttndtt
      181 paltgaiddp tatvvvnvdg idypatnngd gtwtladntl palidgphtv avtatdpagn
      241 tatdtatlti dtvpadliga itipedlngd gilnadelgt dgsfnaqval gpdaldgtvv
      301 nvngvnytvt aadlangyit aaipvtgegp vaihaea
//
LOCUS       WP_235894949              86 aa            linear   BCT 02-MAR-2025
DEFINITION  type II toxin-antitoxin system CcdA family antitoxin [Brucella
            pecoris].
ACCESSION   WP_235894949
VERSION     WP_235894949.1
KEYWORDS    RefSeq.
SOURCE      Brucella pecoris (Ochrobactrum pecoris)
  ORGANISM  Brucella pecoris
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 86)
  AUTHORS   Bahassi,E.M., O'Dea,M.H., Allali,N., Messens,J., Gellert,M. and
            Couturier,M.
  TITLE     Interactions of CcdB with DNA gyrase. Inactivation of Gyra,
            poisoning of the gyrase-DNA complex, and the antidote action of
            CcdA
  JOURNAL   J Biol Chem 274 (16), 10936-10944 (1999)
   PUBMED   10196173
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019009.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07362.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Brucella pecoris"
                     /db_xref="taxon:867683"
     Protein         1..86
                     /product="type II toxin-antitoxin system CcdA family
                     antitoxin"
                     /calculated_mol_wt=9172
     Region          <21..76
                     /region_name="CcdA"
                     /note="Post-segregation antitoxin CcdA; cl02188"
                     /db_xref="CDD:470490"
ORIGIN      
        1 mtrpstavrp vcchslarsy sellsearrh kidispaaqi giaqalaaak salwkennrv
       61 tmrssnasfk angflsnviv nsngem
//
LOCUS       WP_235895084             286 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Acinetobacter baumannii].
ACCESSION   WP_235895084
VERSION     WP_235895084.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..286
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <1..282
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 lfalaytivk qtytdrqqar astmfllgtp igaflgfpit aavlahhdwh ttffvmaalt
       61 liailsivfg lrnlqlkktv elegeskrtn fkghiantkv lvsnsafwlv clfnialmty
      121 lwglnswvps ylmqdkgfnl kefgvyssfp fiamligevv gaflsdklgr raiqvfsgll
      181 lagifmyvmv imteplliia amslsamawg fgvaavfall arvttsnvga taggifnglg
      241 nfasaiapvl igyivmqths fnlgitflaa vavigslflv pllkry
//
LOCUS       WP_235895213             444 aa            linear   BCT 02-MAR-2025
DEFINITION  fimbrial protein [Yersinia alsatica].
ACCESSION   WP_235895213
VERSION     WP_235895213.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012635.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00419.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..444
                     /product="fimbrial protein"
                     /GO_component="GO:0009289 - pilus [Evidence IEA]"
                     /GO_process="GO:0007155 - cell adhesion [Evidence IEA]"
                     /calculated_mol_wt=47140
     Region          38..444
                     /region_name="Fimbrial"
                     /note="Fimbrial protein; cl01416"
                     /db_xref="CDD:445401"
ORIGIN      
        1 mnsitqhsan lsprrpllwr glqlflslgl laialpsyaq cvwkganigg dnygaslqlg
       61 ninitsdyiq pvdsilassm islvparfws dpeaviyecd ladkdslfev fatngdsnvg
      121 gytnmgdnff qtffpytalk lihvdsgief triwqqvplr kydvvgnkiq ikgkhfsqir
      181 aelkkvgsvd rtpgpatwgc pgpaadnysg sytcnqpngy vvfkgpgmpv petgydsatn
      241 yqtwgtgrym afgmntspvs iltrkntcvv rnvtpyvvfp iitvnelidn qtrsanitvd
      301 iecqagaesg vnsgqtalgi qtslpgylka qglglvnsag gvsyllsdhy gtdsriatgv
      361 gislsdssgg amnfvgwggc vkdcastasa gwypvltgat gtgssaagfn nyshnftatl
      421 kklpngtpta gkvdatayvl vkiq
//
LOCUS       WP_235895301             255 aa            linear   BCT 02-MAR-2025
DEFINITION  amino acid permease, partial [Acinetobacter baumannii].
ACCESSION   WP_235895301
VERSION     WP_235895301.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         1..>255
                     /product="amino acid permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          11..>253
                     /region_name="LysP"
                     /note="Amino acid permease [Amino acid transport and
                     metabolism]; COG0833"
                     /db_xref="CDD:440595"
ORIGIN      
        1 mqslnyrnnd asqhgssapl kramstrhlv mislggaigt glflgsgdvi sqagpigaii
       61 syflggliay tvmlclgela vhvpesgsfg eyarryigpg tgymitwlyw ltwtatlgte
      121 ftaaallvqe wfpstsvwaw tlffgalvff lnvsstrlfa esefwlalvk vitiicfigl
      181 gllaifgfip yqghetaplf snltahgwfp nglfpifatm livnfafsgt eligvaagea
      241 enpaktvpka inaai
//
LOCUS       WP_235895058             245 aa            linear   BCT 02-MAR-2025
DEFINITION  beta/gamma crystallin domain-containing protein [Yersinia
            rochesterensis].
ACCESSION   WP_235895058
VERSION     WP_235895058.1
KEYWORDS    RefSeq.
SOURCE      Yersinia rochesterensis
  ORGANISM  Yersinia rochesterensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 245)
  AUTHORS   Lin,Z., Sriskanthadevan,S., Huang,H., Siu,C.H. and Yang,D.
  TITLE     Solution structures of the adhesion molecule DdCAD-1 reveal new
            insights into Ca(2+)-dependent cell-cell adhesion
  JOURNAL   Nat Struct Mol Biol 13 (11), 1016-1022 (2006)
   PUBMED   17057715
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020534.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08964.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Yersinia rochesterensis"
                     /db_xref="taxon:1604335"
     Protein         1..245
                     /product="beta/gamma crystallin domain-containing protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0098609 - cell-cell adhesion [Evidence
                     IEA]"
                     /calculated_mol_wt=28102
     Region          45..>104
                     /region_name="Crystall"
                     /note="Beta/Gamma crystallin; cl02528"
                     /db_xref="CDD:470604"
ORIGIN      
        1 mnkllflfll sitfigdvks neehihepig kplyftakky apacfytedn fqgesvcltp
       61 pmmmdfyntk dhhfndniss ikipedvhvt iykndnynqp syklmesinl selkkidmsg
      121 qisavitaqs pgfcdencvi lteqkielee vfnkyhgikh ntnklilmnf evnkdsdfvv
      181 gfidyplalv igndlffytt ahnkplnmrl rentdnlsll fklnenslqf qylaakgtep
      241 lntpf
//
LOCUS       WP_235895307             228 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein, partial [Acinetobacter
            baumannii].
ACCESSION   WP_235895307
VERSION     WP_235895307.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 228)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..228
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
     Region          <1..225
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
ORIGIN      
        1 lggndagivl pdanideiaa kifnmaflna gqtcaalkrl yvhesqyeal sqkladiana
       61 qvvgdgmass ttfgpvqnqm qynkvkalia eaiaqgakal sgqqqlpeqg yfiaptilte
      121 vsdscrvvqe eqfgpvlpvl kytdindaia randsefglg gsiwssdlka aqtyatqlqc
      181 gtvwinthae vlphapfggw kmsglgaefg legllentig qtvhiskv
//
LOCUS       WP_235895402             336 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidase inhibitor family I36 protein, partial [Yersinia
            rochesterensis].
ACCESSION   WP_235895402
VERSION     WP_235895402.1
KEYWORDS    RefSeq.
SOURCE      Yersinia rochesterensis
  ORGANISM  Yersinia rochesterensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 336)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
REFERENCE   2  (residues 1 to 336)
  AUTHORS   Ohno,A., Tate,S., Seeram,S.S., Hiraga,K., Swindells,M.B., Oda,K.
            and Kainosho,M.
  TITLE     NMR structure of the Streptomyces metalloproteinase inhibitor,
            SMPI, isolated from Streptomyces nigrescens TK-23: another example
            of an ancestral beta gamma-crystallin precursor structure
  JOURNAL   J Mol Biol 282 (2), 421-433 (1998)
   PUBMED   9735297
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03995.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Yersinia rochesterensis"
                     /db_xref="taxon:1604335"
     Protein         1..>336
                     /product="peptidase inhibitor family I36 protein"
     Region          27..109
                     /region_name="Crystall"
                     /note="Beta/Gamma crystallin; cl02528"
                     /db_xref="CDD:470604"
     Region          71..161
                     /region_name="Crystall"
                     /note="Beta/Gamma crystallin; cl02528"
                     /db_xref="CDD:470604"
     Region          168..>217
                     /region_name="Crystall"
                     /note="Beta/Gamma crystallin; cl02528"
                     /db_xref="CDD:470604"
ORIGIN      
        1 miktmflfil lslvsmlsfe vlsskpkvcf fidenyqges lcttegnain elplkwndsi
       61 ssisvphglv vsvfkninfs graltlknnv dslsslrwan lndeissfkv rsaacfyeld
      121 afagdsfcls gnenldlyhd sdpadrkyrv vnifndniss iqlppdtqvt iyeddnytgr
      181 yyvitndvsv gdlekigmnk sitsikvsqq eyficdqyci vkdtfsipfg hefgrywldd
      241 rikykevlis fslsgdddys inlfddgiir vmgrvillth khhqensyif elnensdtls
      301 fllrfnggys eiqfiesies kaiyisplvg slfnle
//
LOCUS       WP_235895393             175 aa            linear   BCT 02-MAR-2025
DEFINITION  M3 family metallopeptidase, partial [Yersinia rochesterensis].
ACCESSION   WP_235895393
VERSION     WP_235895393.1
KEYWORDS    RefSeq.
SOURCE      Yersinia rochesterensis
  ORGANISM  Yersinia rochesterensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 175)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013591.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01432.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Yersinia rochesterensis"
                     /db_xref="taxon:1604335"
     Protein         <1..>175
                     /product="M3 family metallopeptidase"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          <59..>146
                     /region_name="GluZincin"
                     /note="Gluzincin Peptidase family (thermolysin-like
                     proteinases, TLPs) which includes peptidases M1, M2, M3,
                     M4, M13, M32 and M36 (fungalysins); cl14813"
                     /db_xref="CDD:472708"
ORIGIN      
        1 qrrksftlth lnaagervsa slgelltnqg tnenaecrhs shlalreleq wllhnglpel
       61 islrnrfark lgyrnyfdyk vnkteqmtpe qlfaildrfe eqtreanlrs lqqlveekgl
      121 etlepwnirf asggdvtrll dpyfpfaesl drwvnsfkrl hvgfrgaqmn ldllv
//
LOCUS       WP_235895351            1469 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Helicobacter mehlei].
ACCESSION   WP_235895351
VERSION     WP_235895351.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter mehlei
  ORGANISM  Helicobacter mehlei
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 1469)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 1469)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019344.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07724.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1469
                     /organism="Helicobacter mehlei"
                     /db_xref="taxon:2316080"
     Protein         1..1469
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=169215
     Region          1156..1458
                     /region_name="clpX"
                     /note="ATP-dependent Clp protease ATP-binding subunit
                     ClpX; PRK05342"
                     /db_xref="CDD:235422"
ORIGIN      
        1 mhyigygili wvgielgvii lifmlaitfd vctgvinkvi dmrnrakark pktkpkpptg
       61 rvtlqdleae smedgstttk qkpqdtntsq qgmqdgdsnq ldkgkhmgks kkdmdvcglk
      121 rhlilqragc lawmadhayk nfgwvaltpl hqargshlaw eritadqdry vlegaeelew
      181 lqkypyrayy ffrgicaqrq evqrviifkd saevlnflln lykpyahfdp kfsqhqtmvn
      241 lnleadkekn rarflyeqtl qswsysfent lhkiclktpt qvkiplsslp fcpktlapvl
      301 ekyrwgdtyi fqttytpppn lpkfdpeill tslskslkll qehleecmqn lvppqrkpkf
      361 krkvrkqlak lcfaqhhgli tpeyiehfkl hdpedpeaik avaqvyiaqn fpsskdkiai
      421 peeseyfalr rftlndqkhy ymeqalwvwa yqrlleifnn slesreiqdq llarlspaqa
      481 cefeqvfyen leekqgvaiw sliehlalpl avlqqddqvv iaknphfkpa tflnesahhr
      541 dilrllfffg rvlseenasq llqmsrdiip vyphvskemg fyalkiyllq qkagclcwia
      601 dqayknfgwv slnheqqaqg mhiaweyite eqiyqrqeah yffagiyaqr qakqrrinfq
      661 naqeviaflv elfkpfathd pnhvshlsaa hdtmqyvdvd mehfgarlye eilkewepdf
      721 vgslekalkq tpthaiiats dlpfltkete lalekyrqgd nyifqttytp psalpsfdrs
      781 ilafnlkesl kveqgalagv vdslarpknn ptlkrktrkq iaklrlqeac giltpndfen
      841 fhldhpkaks flnkhrfkyq gqecyyfeya lniwvlqrll eifegsiamq evehallarl
      901 npaqalefts assqkyastq nitttlashl nlplsivehs dsmaivpnpa fkphvflnhs
      961 phsqeilrll ldfknchkes keptpttprl ftlvpkaleg vfsqlcieni dvhmealffd
     1021 dkpafvqkil dlqrqflkek tnfeenflew caahlesanv pmedkkgliq kiieieqrli
     1081 deqatlekaf atwwaenvhm eleglffddk paffqailam qaqffkekqi kaleleiaps
     1141 tptskppppk pqdkyspkai kayldqfvig qenakkqmsl vfsdhykriq gqsglekana
     1201 icigpsgsgk tfliematqy ldipyclvna asltptgyrg eetnqmfaml ynnadkniek
     1261 aeqgvlvlde idklgqggws dkewrqgvqn ellkviekgi vsfeygngsn kqtislktdh
     1321 mlfivlghfe klwknnktlh qklpkitnen liecgmkref lrrfsirvlf epvdinmlte
     1381 lldrrlkpfq eefaqagsal efspeakrfl vknalkegvg msgldqklhe llmplrfdle
     1441 dynglkcvin getlengevf vepldcpld
//
LOCUS       WP_235895419             128 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase, partial [Yersinia
            rochesterensis].
ACCESSION   WP_235895419
VERSION     WP_235895419.1
KEYWORDS    RefSeq.
SOURCE      Yersinia rochesterensis
  ORGANISM  Yersinia rochesterensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 128)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 128)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Yersinia rochesterensis"
                     /db_xref="taxon:1604335"
     Protein         <1..128
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <8..88
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(35,38,61,70)
                     /site_type="active"
                     /db_xref="CDD:271177"
ORIGIN      
        1 lvalegdrlf secyfrfmaa inttdiklpa gqlthvlrht faahfmmsgg nilvlqrilg
       61 hsdiqmtmry ahfapehlet avqfnplttm stggkvatkw rrrlpspniy ypsitnqliv
      121 fivyccfi
//
LOCUS       WP_235895423             119 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GNAT family N-acetyltransferase [Yersinia].
ACCESSION   WP_235895423
VERSION     WP_235895423.1
KEYWORDS    RefSeq.
SOURCE      Yersinia
  ORGANISM  Yersinia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae.
REFERENCE   1  (residues 1 to 119)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 119)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025054.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13673.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Yersinia"
                     /db_xref="taxon:629"
     Protein         1..119
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=13309
     Region          2..113
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
ORIGIN      
        1 miiraisedi prlveiweka vreshlflte adiqfyllgl evwlfensre avgligldgn
       61 kvevlfidpi yhgkgfgktl lahaqhlkgk lsvneqnpaa lafylksgfv ktgqfrtgr
//
LOCUS       WP_235895442             222 aa            linear   BCT 02-MAR-2025
DEFINITION  TPM domain-containing protein [Klebsiella pasteurii].
ACCESSION   WP_235895442
VERSION     WP_235895442.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pasteurii
  ORGANISM  Klebsiella pasteurii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (residues 1 to 222)
  AUTHORS   Wu,H.Y., Liu,M.S., Lin,T.P. and Cheng,Y.S.
  TITLE     Structural and functional assays of AtTLP18.3 identify its novel
            acid phosphatase activity in thylakoid lumen
  JOURNAL   Plant Physiol 157 (3), 1015-1025 (2011)
   PUBMED   21908686
REFERENCE   2  (residues 1 to 222)
  AUTHORS   Wegener,K.M., Bennewitz,S., Oelmuller,R. and Pakrasi,H.B.
  TITLE     The Psb32 protein aids in repairing photodamaged photosystem II in
            the cyanobacterium Synechocystis 6803
  JOURNAL   Mol Plant 4 (6), 1052-1061 (2011)
   PUBMED   21653280
REFERENCE   3  (residues 1 to 222)
  AUTHORS   Sirpio,S., Allahverdiyeva,Y., Suorsa,M., Paakkarinen,V.,
            Vainonen,J., Battchikova,N. and Aro,E.M.
  TITLE     TLP18.3, a novel thylakoid lumen protein regulating photosystem II
            repair cycle
  JOURNAL   Biochem J 406 (3), 415-425 (2007)
   PUBMED   17576201
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016424.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04536.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Klebsiella pasteurii"
                     /db_xref="taxon:2587529"
     Protein         1..222
                     /product="TPM domain-containing protein"
                     /calculated_mol_wt=25485
     Region          2..>154
                     /region_name="YgcG"
                     /note="Uncharacterized membrane protein YgcG, contains a
                     TPM-fold domain [Function unknown]; COG1512"
                     /db_xref="CDD:441121"
ORIGIN      
        1 mssksdiiqr aerfkkqtgi apfillttqe tllqakktql lqsakrlade nqgfllliit
       61 tdsrqielig dpkaqsrlrd shaaliienh tlaywqnglw fqglntaldv lqaallqqpt
      121 ppltwyassd apykddlpgh plgflfwvla fmaftwcfrf ttrwryalkf tlamtvanlf
      181 yqavclyfss ggfylykivp lwaimigfst fvatwlwtrk rr
//
LOCUS       WP_235895499             151 aa            linear   BCT 02-MAR-2025
DEFINITION  YagK/YfjJ domain-containing protein [Yersinia alsatica].
ACCESSION   WP_235895499
VERSION     WP_235895499.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 151)
  AUTHORS   Lin,N.T., Chang,R.Y., Lee,S.J. and Tseng,Y.H.
  TITLE     Plasmids carrying cloned fragments of RF DNA from the filamentous
            phage (phi)Lf can be integrated into the host chromosome via
            site-specific integration and homologous recombination
  JOURNAL   Mol Genet Genomics 266 (3), 425-435 (2001)
   PUBMED   11713672
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023154.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11726.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..151
                     /product="YagK/YfjJ domain-containing protein"
                     /calculated_mol_wt=17303
     Region          <10..135
                     /region_name="Inovirus_Gp2"
                     /note="Inovirus Gp2; pfam11726"
                     /db_xref="CDD:432027"
ORIGIN      
        1 msvdesnspi sglfsklrdk fkakqwdhqp ikkfaygwvs eletakqvhy hlwialpgnq
       61 vhktghvkyg lfqiindlwl kltkglgssh laknsymikq nddnqlqkfv yrisylakdr
      121 gkysqgdktk rfdgsrlfgk lapayverqa a
//
LOCUS       WP_235895537             363 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase [Yersinia alsatica].
ACCESSION   WP_235895537
VERSION     WP_235895537.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 363)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..363
                     /product="PfkB family carbohydrate kinase"
                     /calculated_mol_wt=39265
     Region          5..47
                     /region_name="HTH_24"
                     /note="Winged helix-turn-helix DNA-binding; pfam13412"
                     /db_xref="CDD:404317"
     Region          54..360
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
     Site            order(98,306,309)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238916"
     Site            order(240,276,304,307..308,311,333,336)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238916"
ORIGIN      
        1 mtsrekqilq llrrdplipq qeiadilgis rsgvaghimn lmqkgyikgk gyilsehsyv
       61 vvigsvnmdv cgyaaskliy edsnpgkikc tpggvgrnia eniallgkec hlisvvgddf
      121 ygatlideak ragvnvsnch slhgentsty vslldnsgem lvaindmril ekltpsllat
      181 tkeliqhagi lvvdcnltee slswiftnag nvpvfvdtvs afkapriknw lshihtlkpn
      241 rleaeilsgm kinshndipa vaswfhqqgv qrlalsmgkd gvyfsevdgq tgwslplnin
      301 ivnvtgagda mmsglascwl ddmefaesir faqgcsaltl sseltnnpnl sngsvkklle
      361 lqp
//
LOCUS       WP_235895546             100 aa            linear   BCT 02-MAR-2025
DEFINITION  YtcA family lipoprotein [Yersinia alsatica].
ACCESSION   WP_235895546
VERSION     WP_235895546.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028400.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17090.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..100
                     /product="YtcA family lipoprotein"
                     /calculated_mol_wt=10873
ORIGIN      
        1 milfnrlnct slslwrgswv llsaialsgc trseapsfal fgsyfpawla cafigviaam
       61 aarvlfirvg idevlpwrll iyvclalava ficslllfar
//
LOCUS       WP_235895403             225 aa            linear   BCT 02-MAR-2025
DEFINITION  heme acquisition protein HasA, partial [Yersinia rochesterensis].
ACCESSION   WP_235895403
VERSION     WP_235895403.1
KEYWORDS    RefSeq.
SOURCE      Yersinia rochesterensis
  ORGANISM  Yersinia rochesterensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 225)
  AUTHORS   Arnoux,P., Haser,R., Izadi,N., Lecroisey,A., Delepierre,M.,
            Wandersman,C. and Czjzek,M.
  TITLE     The crystal structure of HasA, a hemophore secreted by Serratia
            marcescens
  JOURNAL   Nat Struct Biol 6 (6), 516-520 (1999)
   PUBMED   10360351
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018177.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06438.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Yersinia rochesterensis"
                     /db_xref="taxon:1604335"
     Protein         <1..225
                     /product="heme acquisition protein HasA"
ORIGIN      
        1 dtimtveiky qskiknetis sylhqwatkf ddmvlikpdi eysiisstkp sppvsgrkia
       61 aasshlydqk kaaivtefva tinidiedll dqhlipdisg slelgenlfp tsdlkgigfe
      121 qfqlqkvqle fsgldiaddi tnsiytlsyv lnedknyqgg edlgiynllr gnaepilmkl
      181 eaqgidvhtp lkdmaiasqf ditsdimvdt ldietvgvpq ellaa
//
LOCUS       WP_235895678             100 aa            linear   BCT 02-MAR-2025
DEFINITION  YtcA family lipoprotein [Yersinia alsatica].
ACCESSION   WP_235895678
VERSION     WP_235895678.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028400.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17090.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..100
                     /product="YtcA family lipoprotein"
                     /calculated_mol_wt=10832
ORIGIN      
        1 milfnrlsct slslwrgswv llsaialsgc trseapsfal fgsyfpswla cafigviaav
       61 aarvlfirvg idevlpwrll vyvclalava ficslllfsr
//
LOCUS       WP_235895641             102 aa            linear   BCT 02-MAR-2025
DEFINITION  head completion/stabilization protein [Yersinia alsatica].
ACCESSION   WP_235895641
VERSION     WP_235895641.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 102)
  AUTHORS   Linderoth,N.A., Ziermann,R., Haggard-Ljungquist,E., Christie,G.E.
            and Calendar,R.
  TITLE     Nucleotide sequence of the DNA packaging and capsid synthesis genes
            of bacteriophage P2
  JOURNAL   Nucleic Acids Res 19 (25), 7207-7214 (1991)
   PUBMED   1837355
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017713.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05926.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..102
                     /product="head completion/stabilization protein"
                     /GO_process="GO:0019069 - viral capsid assembly [Evidence
                     IEA]"
                     /calculated_mol_wt=11263
     Region          <1..102
                     /region_name="Phage_GPL"
                     /note="Phage head completion protein (GPL); pfam05926"
                     /db_xref="CDD:428676"
ORIGIN      
        1 maevnaelfd yrsqqmaagf kalaevqaeq idgenmqlae ylravgavta allaeryrgy
       61 dasargdkra eaiknsvgew wrdarhsirn itgqphniid li
//
LOCUS       WP_235895731             426 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: PHP domain-containing protein [Enorma].
ACCESSION   WP_235895731
VERSION     WP_235895731.1
KEYWORDS    RefSeq.
SOURCE      Enorma
  ORGANISM  Enorma
            Bacteria; Bacillati; Actinomycetota; Coriobacteriia;
            Coriobacteriales; Coriobacteriaceae.
REFERENCE   1  (residues 1 to 426)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014826.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02811.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Enorma"
                     /db_xref="taxon:1472762"
     Protein         1..426
                     /product="PHP domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=45771
     Region          <2..>81
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          141..402
                     /region_name="Cycl_ph_dihydrol"
                     /note="phosphoribosyl 1,2-cyclic phosphate
                     1,2-diphosphodiesterase; NF041661"
                     /db_xref="CDD:469543"
ORIGIN      
        1 maktkgaksa akeaeksark rakasrkmre radasldada rvseearrka lkrelkkhgk
       61 akkdaraiir eearehaeas kairretdra iksiaaqaav daantaaqta araaqeaarh
      121 lsprysapcp vagrtalgsw dlhnhsvfsd gsctvdelia garaagltri aitdhdclsq
      181 lsfirarsre lsfpvlagve vsahdpatgr kvhvlgfgle atadgsgpve rlvaptlfar
      241 tatslwqawv lkredvefsg hrlsfdevyd varastgiyk qhimealtrr phtdpdyqfc
      301 yqcwfkgdsp anrtveypta veavraireq ggvpvlahpg qtkswaivpe lvgaglmgie
      361 afhpdhgpve eglafelaer lglfvtggsd yhgkygsspa lgtsfvcpee agskveglfa
      421 seaals
//
LOCUS       WP_235895523              79 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: plasmid partition protein ParG [Yersinia].
ACCESSION   WP_235895523
VERSION     WP_235895523.1
KEYWORDS    RefSeq.
SOURCE      Yersinia
  ORGANISM  Yersinia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae.
REFERENCE   1  (residues 1 to 79)
  AUTHORS   Golovanov,A.P., Barilla,D., Golovanova,M., Hayes,F. and Lian,L.Y.
  TITLE     ParG, a protein required for active partition of bacterial
            plasmids, has a dimeric ribbon-helix-helix structure
  JOURNAL   Mol Microbiol 50 (4), 1141-1153 (2003)
   PUBMED   14622405
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020835.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09274.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Yersinia"
                     /db_xref="taxon:629"
     Protein         1..79
                     /product="plasmid partition protein ParG"
                     /calculated_mol_wt=9188
     Region          5..69
                     /region_name="ParG"
                     /note="pfam09274"
                     /db_xref="CDD:117819"
ORIGIN      
        1 mtmpkmtlgk hrkidevlet fkkpaivkrl qvnidedlhk rfkitcshee vemtevittl
       61 itewlathev evtkkrvse
//
LOCUS       WP_235895739             192 aa            linear   BCT 02-MAR-2025
DEFINITION  DciA family protein [Enorma shizhengliae].
ACCESSION   WP_235895739
VERSION     WP_235895739.1
KEYWORDS    RefSeq.
SOURCE      Enorma shizhengliae
  ORGANISM  Enorma shizhengliae
            Bacteria; Bacillati; Actinomycetota; Coriobacteriia;
            Coriobacteriales; Coriobacteriaceae; Enorma.
REFERENCE   1  (residues 1 to 192)
  AUTHORS   Brezellec,P., Vallet-Gely,I., Possoz,C., Quevillon-Cheruel,S. and
            Ferat,J.L.
  TITLE     DciA is an ancestral replicative helicase operator essential for
            bacterial replication initiation
  JOURNAL   Nat Commun 7, 13271 (2016)
   PUBMED   27830752
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017103.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05258.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Enorma shizhengliae"
                     /db_xref="taxon:2606615"
     Protein         1..192
                     /product="DciA family protein"
                     /calculated_mol_wt=21264
ORIGIN      
        1 mgaadrtdgg fererttvav ssimgqvrrd ivsratpeql ermrkaeaar gvyrawnavc
       61 ggtregehvt glrylsdqnk llvylddavw tqemtmlrei irarmeregv rldgfvfrtt
      121 kpgfkrsgve rprgekkaap tppstaplsa eeegaidaav apiaddrlrk slkkamkasm
      181 ewkkgtdlkn ka
//
LOCUS       WP_235895619             153 aa            linear   BCT 02-MAR-2025
DEFINITION  toxin-activating lysine-acyltransferase [Yersinia alsatica].
ACCESSION   WP_235895619
VERSION     WP_235895619.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Trent,M.S., Worsham,L.M. and Ernst-Fonberg,M.L.
  TITLE     HlyC, the internal protein acyltransferase that activates hemolysin
            toxin: role of conserved histidine, serine, and cysteine residues
            in enzymatic activity as probed by chemical modification and
            site-directed mutagenesis
  JOURNAL   Biochemistry 38 (11), 3433-3439 (1999)
   PUBMED   10079090
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014813.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02794.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..153
                     /product="toxin-activating lysine-acyltransferase"
                     /GO_component="GO:0005737 - cytoplasm [Evidence IEA]"
                     /GO_function="GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009404 - toxin metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=17530
     Region          14..152
                     /region_name="HlyC"
                     /note="ACP:hemolysin acyltransferase (hemolysin-activating
                     protein) [Posttranslational modification, protein
                     turnover, chaperones]; COG2994"
                     /db_xref="CDD:442233"
ORIGIN      
        1 mdnkdhstil lspeiqniig gvmlltrhsp lhllysvsew qqrivtslll nqfryyeten
       61 gkpiafcnwa llsgdnlaal isaerdinfn dwqsgdnlff pemiapygha rliatdlrrn
      121 vflykkgdia calrgriydk dcevkpkiqw fti
//
LOCUS       WP_235895858            1039 aa            linear   BCT 02-MAR-2025
DEFINITION  mechanosensitive ion channel domain-containing protein [Enorma
            shizhengliae].
ACCESSION   WP_235895858
VERSION     WP_235895858.1
KEYWORDS    RefSeq.
SOURCE      Enorma shizhengliae
  ORGANISM  Enorma shizhengliae
            Bacteria; Bacillati; Actinomycetota; Coriobacteriia;
            Coriobacteriales; Coriobacteriaceae; Enorma.
REFERENCE   1  (residues 1 to 1039)
  AUTHORS   Flegler,V.J., Rasmussen,A., Borbil,K., Boten,L., Chen,H.A.,
            Deinlein,H., Halang,J., Hellmanzik,K., Loffler,J., Schmidt,V.,
            Makbul,C., Kraft,C., Hedrich,R., Rasmussen,T. and Bottcher,B.
  TITLE     Mechanosensitive channel gating by delipidation
  JOURNAL   Proc Natl Acad Sci U S A 118 (33) (2021)
   PUBMED   34376558
REFERENCE   2  (residues 1 to 1039)
  AUTHORS   Lai,J.Y., Poon,Y.S., Kaiser,J.T. and Rees,D.C.
  TITLE     Open and shut: crystal structures of the dodecylmaltoside
            solubilized mechanosensitive channel of small conductance from
            Escherichia coli and Helicobacter pylori at 4.4 A and 4.1 A
            resolutions
  JOURNAL   Protein Sci 22 (4), 502-509 (2013)
   PUBMED   23339071
REFERENCE   3  (residues 1 to 1039)
  AUTHORS   Zhang,X., Wang,J., Feng,Y., Ge,J., Li,W., Sun,W., Iscla,I., Yu,J.,
            Blount,P., Li,Y. and Yang,M.
  TITLE     Structure and molecular mechanism of an anion-selective
            mechanosensitive channel of small conductance
  JOURNAL   Proc Natl Acad Sci U S A 109 (44), 18180-18185 (2012)
   PUBMED   23074248
REFERENCE   4  (residues 1 to 1039)
  AUTHORS   Pliotas,C., Ward,R., Branigan,E., Rasmussen,A., Hagelueken,G.,
            Huang,H., Black,S.S., Booth,I.R., Schiemann,O. and Naismith,J.H.
  TITLE     Conformational state of the MscS mechanosensitive channel in
            solution revealed by pulsed electron-electron double resonance
            (PELDOR) spectroscopy
  JOURNAL   Proc Natl Acad Sci U S A 109 (40), E2675-E2682 (2012)
   PUBMED   23012406
REFERENCE   5  (residues 1 to 1039)
  AUTHORS   Kloda,A. and Martinac,B.
  TITLE     Structural and functional differences between two homologous
            mechanosensitive channels of Methanococcus jannaschii
  JOURNAL   EMBO J 20 (8), 1888-1896 (2001)
   PUBMED   11296222
REFERENCE   6  (residues 1 to 1039)
  AUTHORS   Kloda,A. and Martinac,B.
  TITLE     Molecular identification of a mechanosensitive channel in archaea
  JOURNAL   Biophys J 80 (1), 229-240 (2001)
   PUBMED   11159397
REFERENCE   7  (residues 1 to 1039)
  AUTHORS   Martinac,B.
  TITLE     Mechanosensitive channels in prokaryotes
  JOURNAL   Cell Physiol Biochem 11 (2), 61-76 (2001)
   PUBMED   11275684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013117.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00924.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Enorma shizhengliae"
                     /db_xref="taxon:2606615"
     Protein         1..1039
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=114000
     Region          198..279
                     /region_name="HK_sensor"
                     /note="Sensor domains of Histidine Kinase receptors;
                     cl38916"
                     /db_xref="CDD:365792"
     Region          362..604
                     /region_name="dCache_1"
                     /note="Cache domain; pfam02743"
                     /db_xref="CDD:460673"
     Region          738..982
                     /region_name="MscS"
                     /note="Small-conductance mechanosensitive channel [Cell
                     wall/membrane/envelope biogenesis]; COG0668"
                     /db_xref="CDD:440432"
ORIGIN      
        1 mpralfrktn lkialllaiv avsmvvmgvl lsgmqeslsr ssydtemeee aselkellas
       61 aeeeasqnke tfdaiyqska asvafmaand agfeatnakm aeyrqlldvd nvlvvksdgt
      121 ivakaaetka nfsyarfnyl reclatgeps raveielpge dwlcryyaar ldadtmvvie
      181 qnpeelrlld aetsstesvl rnisvgqngy vfalsaqtyl iefhpdadli grdaldagid
      241 vaqledgava qlnldgeely crvsligdty yvcavpesdm aasrmvtvav ilfvffavia
      301 tvtlygifvm rqeervghen dhlvrvgrlr ynrevgkraa iftlvgfiai vavsfymqtl
      361 falstqsvvn kerassiaet idrvndrade ltvqyderyl skarvaayil eanpalatkp
      421 kmqeladvlq vsgvylfdgs gsmvvsnapy ehftlstdet dqsfafwqll qgvdsyvqep
      481 tedemtgelv qyigvatydd agytngfvqv mvhagrleel lrsvqidhvl dgvkagsggf
      541 afavskadgt isyypdasiq gkqatkvglk esqirggydd yitiggetfy assvetpdyf
      601 vyvagpegel maqrlpltla tglialacla vvfcliafep ermpaplrsm tedpnadrvf
      661 eietpsgrrt ktesaasrwl nrsldwshmt peqklgyvlr lfvgvgvvav ffsvlfknqi
      721 fgtnsvfgyi lgggwergln ifaltasvmt acviftlswv vqrvlhllsd alsargetvc
      781 rllvsltkyg ailgtlywcl atvgvdtgtl lasaglltla isfgakdlvt dllsglfiif
      841 egefrvgdti svgtntgtvm eigirttkin dgndnvivlr nsaisnvvnr tkldsfatid
      901 vevsvgedlp hlenvlkeal priaerqpmi idgpfyrgiv alttstmtvr viarcseknr
      961 salernlkre mrllltrhdi apyqlqfehd eddraplseg eadelegads fvesqdasig
     1021 kydekrakkd kdpdarpea
//
LOCUS       WP_235895869             601 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Enorma shizhengliae].
ACCESSION   WP_235895869
VERSION     WP_235895869.1
KEYWORDS    RefSeq.
SOURCE      Enorma shizhengliae
  ORGANISM  Enorma shizhengliae
            Bacteria; Bacillati; Actinomycetota; Coriobacteriia;
            Coriobacteriales; Coriobacteriaceae; Enorma.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Enorma shizhengliae"
                     /db_xref="taxon:2606615"
     Protein         1..601
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=60088
     Region          76..506
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(80..81,84..85,88,120,171..172,174..176,179,199,
                     202..203,206,345,348..349,352..354,357,385,389,443..444,
                     448,452,468,471..472,475..476,479)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340879"
ORIGIN      
        1 mnnnhqaraa qparasqakt tasavnarpa gnsgaasvat pgaaeapatt asapaaasas
       61 aaarflilpi ivlilaqmga tgdngalsla tasltselga ttaqiqlanm iyplvggafm
      121 iagglagtmv gwkktfrggi llcalgevvl alapsmavfi wggrvlvglg asfmipsvlg
      181 lipliyqghd rviafgaiga asglsallpl algvvmqvag mhvtflalag yfaivlaasf
      241 tlpaieqpre ragfdgvgva laasglflll iglssisswg lvtplstapf tilgispalp
      301 mavagivvlg ilvayerrve arggiavlps aflttpqvra glvacaltff fmgaqsilma
      361 pylqlvagws pvavgtisiv tgvptfalal gipkfmpqas prrviqagyv amavalgima
      421 fsvtengasa plvylgafma gvgagtvsah asnvvamalp ereasqsggi qstmrnvgqa
      481 lgvallgavl ifgitgtvrs raaadasisp rvssalpgvs idlgsnrtfe deiagipmtd
      541 gerkelvsie atarldavrm ayavggavvl aglittpair dgerrdpvgs agstkakggr
      601 s
//
LOCUS       WP_235895897             100 aa            linear   BCT 02-MAR-2025
DEFINITION  YtcA family lipoprotein [Yersinia alsatica].
ACCESSION   WP_235895897
VERSION     WP_235895897.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028400.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17090.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..100
                     /product="YtcA family lipoprotein"
                     /calculated_mol_wt=10871
ORIGIN      
        1 milfnrlnct slslwrgswv llsaialsgc trseapsfal fgsyfpawla ctfigviaav
       61 aarvlfirig idevlpwrll vyvclalava ficslllfar
//
LOCUS       WP_235895933             315 aa            linear   BCT 02-MAR-2025
DEFINITION  HipA domain-containing protein [Yersinia alsatica].
ACCESSION   WP_235895933
VERSION     WP_235895933.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 315)
  AUTHORS   Black,D.S., Irwin,B. and Moyed,H.S.
  TITLE     Autoregulation of hip, an operon that affects lethality due to
            inhibition of peptidoglycan or DNA synthesis
  JOURNAL   J Bacteriol 176 (13), 4081-4091 (1994)
   PUBMED   8021189
REFERENCE   2  (residues 1 to 315)
  AUTHORS   Black,D.S., Kelly,A.J., Mardis,M.J. and Moyed,H.S.
  TITLE     Structure and organization of hip, an operon that affects lethality
            due to inhibition of peptidoglycan or DNA synthesis
  JOURNAL   J Bacteriol 173 (18), 5732-5739 (1991)
   PUBMED   1715862
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019421.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07804.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..315
                     /product="HipA domain-containing protein"
                     /calculated_mol_wt=35384
     Region          <3..268
                     /region_name="HipA"
                     /note="Serine/threonine protein kinase HipA, toxin
                     component of the HipAB toxin-antitoxin module [Signal
                     transduction mechanisms]; COG3550"
                     /db_xref="CDD:442771"
ORIGIN      
        1 msaseqdyal lkngtiapvg nmrikealpe lhpdsqlrni rftlqdvier dssfleyaqq
       61 mgaaaggatg aggeapklll ccsshdeiwi dtfqddinie dthylikfpr gkrsaidcdi
      121 lraeyhfyqe lasigidtid tqkmrliege rypslwlprf didcienkrv qygleslysv
      181 mdaapgsyln hfdvirtlaq kltsqyrvsd lgqsinvedl viemikrdll niafgnsdnh
      241 grntalikrp egiwlspiyd fapmkadpeg ivrvtqwgsp yeeggisigg lllkncrisl
      301 iplmflmhln krlns
//
LOCUS       WP_235895936             111 aa            linear   BCT 02-MAR-2025
DEFINITION  GPW/gp25 family protein [Yersinia alsatica].
ACCESSION   WP_235895936
VERSION     WP_235895936.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 111)
  AUTHORS   Dorich,V., Brugger,C., Tripathi,A., Hoskins,J.R., Tong,S.,
            Suhanovsky,M.M., Sastry,A., Wickner,S., Gottesman,S. and
            Deaconescu,A.M.
  TITLE     Structural basis for inhibition of a response regulator of sigmaS
            stability by a ClpXP antiadaptor
  JOURNAL   Genes Dev 33 (11-12), 718-732 (2019)
   PUBMED   30975721
REFERENCE   2  (residues 1 to 111)
  AUTHORS   Taylor,N.M., Prokhorov,N.S., Guerrero-Ferreira,R.C., Shneider,M.M.,
            Browning,C., Goldie,K.N., Stahlberg,H. and Leiman,P.G.
  TITLE     Structure of the T4 baseplate and its function in triggering sheath
            contraction
  JOURNAL   Nature 533 (7603), 346-352 (2016)
   PUBMED   27193680
REFERENCE   3  (residues 1 to 111)
  AUTHORS   Lossi,N.S., Dajani,R., Freemont,P. and Filloux,A.
  TITLE     Structure-function analysis of HsiF, a gp25-like component of the
            type VI secretion system, in Pseudomonas aeruginosa
  JOURNAL   Microbiology (Reading) 157 (Pt 12), 3292-3305 (2011)
   PUBMED   21873404
REFERENCE   4  (residues 1 to 111)
  AUTHORS   Battesti,A., Majdalani,N. and Gottesman,S.
  TITLE     The RpoS-mediated general stress response in Escherichia coli
  JOURNAL   Annu Rev Microbiol 65, 189-213 (2011)
   PUBMED   21639793
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016829.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04965.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..111
                     /product="GPW/gp25 family protein"
                     /calculated_mol_wt=12149
     Region          1..103
                     /region_name="GPW_gp25"
                     /note="Baseplate wedge protein gp25; cl01403"
                     /db_xref="CDD:470187"
ORIGIN      
        1 mnaqtgrria dmdhitqsit divttpvttr cmrrgygsll sdliddpqnp llrlkamsaa
       61 ysaimrwepr ivltrvilte pnagkmtlel hgqrtdladt fnlaipiggd a
//
LOCUS       WP_235895937              66 aa            linear   BCT 02-MAR-2025
DEFINITION  YhfG family protein [Yersinia alsatica].
ACCESSION   WP_235895937
VERSION     WP_235895937.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 66)
  AUTHORS   Stanger,F.V., Harms,A., Dehio,C. and Schirmer,T.
  TITLE     Crystal Structure of the Escherichia coli Fic Toxin-Like Protein in
            Complex with Its Cognate Antitoxin
  JOURNAL   PLoS One 11 (9), e0163654 (2016)
   PUBMED   27657533
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022288.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10832.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..66
                     /product="YhfG family protein"
                     /calculated_mol_wt=7491
     Region          7..>41
                     /region_name="DUF2559"
                     /note="Protein of unknown function (DUF2559); cl23922"
                     /db_xref="CDD:451608"
ORIGIN      
        1 maivmtslae kkqyfdrvkl dnyrqsmrle glnssnqtlp askneraklk qnlinkyaak
       61 sqqssr
//
LOCUS       WP_235895965             171 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Acinetobacter baumannii].
ACCESSION   WP_235895965
VERSION     WP_235895965.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         1..>171
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          25..>171
                     /region_name="2A0115"
                     /note="benzoate transport; TIGR00895"
                     /db_xref="CDD:273327"
ORIGIN      
        1 mnndvqvisk elrntfpsnl gtyerigpht wkwallfayf amvvdgidim llsysltslk
       61 aefglttfqa galgsaslag mgiggilggw acdkfgrvrt iansvtffsv atcllgftqs
      121 feqfmalrfi galgigalym acntlmaeyv pttyrttvlg tlqtgqtvgy i
//
LOCUS       WP_235895981              97 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase, partial [Acinetobacter baumannii].
ACCESSION   WP_235895981
VERSION     WP_235895981.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..97
                     /product="SDR family oxidoreductase"
     Region          <1..97
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 gltkvaalec ardgitvnal cpgyvdtplv rgqiadlakt rnvsldsale dvilamvpqk
       61 rllsveeiad yaiflaseka ggvtgqavvm dggytaq
//
LOCUS       WP_235895992             176 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Acinetobacter
            baumannii].
ACCESSION   WP_235895992
VERSION     WP_235895992.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..>176
                     /product="Ig-like domain-containing protein"
     Region          13..92
                     /region_name="Big_13"
                     /note="Bacterial Ig-like domain; pfam19077"
                     /db_xref="CDD:465968"
     Region          94..173
                     /region_name="Big_6"
                     /note="Bacterial Ig domain; pfam17936"
                     /db_xref="CDD:465576"
ORIGIN      
        1 saditapvva lddvltndst paltgtvndp tatvvvnvdg vdypavnngd gtwtladntl
       61 pvladgphtv svtatdaagn vgndtavvti dtvapnapvl dpinatdpvs gqaepgstvt
      121 vtypdgttat vvagtdgsws vpnpgnlvdg dtvtatatdp agntslpgtg tvsadi
//
LOCUS       WP_235896000             175 aa            linear   BCT 02-MAR-2025
DEFINITION  replication protein P [Yersinia alsatica].
ACCESSION   WP_235896000
VERSION     WP_235896000.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 175)
  AUTHORS   Mallory,J.B., Alfano,C. and McMacken,R.
  TITLE     Host virus interactions in the initiation of bacteriophage lambda
            DNA replication. Recruitment of Escherichia coli DnaB helicase by
            lambda P replication protein
  JOURNAL   J Biol Chem 265 (22), 13297-13307 (1990)
   PUBMED   2165499
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018671.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06992.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..175
                     /product="replication protein P"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /calculated_mol_wt=19814
     Region          <22..147
                     /region_name="Phage_lambda_P"
                     /note="Replication protein P; pfam06992"
                     /db_xref="CDD:462061"
ORIGIN      
        1 mikiyanrwt akngnrpsel werqistmtg dqlqrvctac mkrcesgnsw ppdfaefvtl
       61 vaehggghlg ltvidvlael kryqnefyky scaeefnwrh pvlyqicvdl krlgiekrlt
      121 dtgletqagi elakwqkrva sgvpippirr qlkipdrpsg ltpaqqlaag nryvk
//
LOCUS       WP_235896061             203 aa            linear   BCT 02-MAR-2025
DEFINITION  tight adherence pilus pseudopilin TadF [Yersinia alsatica].
ACCESSION   WP_235896061
VERSION     WP_235896061.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 203)
  AUTHORS   Tomich,M., Fine,D.H. and Figurski,D.H.
  TITLE     The TadV protein of Actinobacillus actinomycetemcomitans is a novel
            aspartic acid prepilin peptidase required for maturation of the
            Flp1 pilin and TadE and TadF pseudopilins
  JOURNAL   J Bacteriol 188 (19), 6899-6914 (2006)
   PUBMED   16980493
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028274.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16964.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     gene            1..203
                     /gene="tadF"
     Protein         1..203
                     /product="tight adherence pilus pseudopilin TadF"
                     /calculated_mol_wt=22661
     Region          16..188
                     /region_name="TadF"
                     /note="Putative tight adherence pilin protein F;
                     pfam16964"
                     /db_xref="CDD:435679"
ORIGIN      
        1 mhkkykskni iintcgamii efslvfliia lfiksmisia ehystigkld risyslagii
       61 rersqlyhdd niltqqqvnq lkdlaesmll nsnipshdla irvetihfkq pqspdienrv
      121 sddiktlsfs vgscepdspl rglthlssfs nagrwiplyq vtlcfpaasw ystllnqngp
      181 aiaiksssit verllnnish tte
//
LOCUS       WP_235895945              59 aa            linear   BCT 02-MAR-2025
DEFINITION  type IV toxin-antitoxin system YeeU family antitoxin [Yersinia
            alsatica].
ACCESSION   WP_235895945
VERSION     WP_235895945.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 59)
  AUTHORS   Masuda,H., Tan,Q., Awano,N., Wu,K.P. and Inouye,M.
  TITLE     YeeU enhances the bundling of cytoskeletal polymers of MreB and
            FtsZ, antagonizing the CbtA (YeeV) toxicity in Escherichia coli
  JOURNAL   Mol Microbiol 84 (5), 979-989 (2012)
   PUBMED   22515815
REFERENCE   2  (residues 1 to 59)
  AUTHORS   Brown,J.M. and Shaw,K.J.
  TITLE     A novel family of Escherichia coli toxin-antitoxin gene pairs
  JOURNAL   J Bacteriol 185 (22), 6600-6608 (2003)
   PUBMED   14594833
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017921.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06154.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..59
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..59
                     /product="type IV toxin-antitoxin system YeeU family
                     antitoxin"
                     /GO_process="GO:0051495 - positive regulation of
                     cytoskeleton organization [Evidence IEA]"
                     /calculated_mol_wt=6309
     Region          <1..43
                     /region_name="CbeA_antitoxin"
                     /note="type IV, cytoskeleton bundling-enhancing factor A;
                     pfam06154"
                     /db_xref="CDD:399275"
ORIGIN      
        1 mesqwlsgal nprrqqcitv rigeficdae mlgshgyvyi avyhelsslp segggapdv
//
LOCUS       WP_235896104             483 aa            linear   BCT 02-MAR-2025
DEFINITION  SH3 domain-containing protein [Yersinia alsatica].
ACCESSION   WP_235896104
VERSION     WP_235896104.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024315.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12913.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..483
                     /product="SH3 domain-containing protein"
                     /calculated_mol_wt=54339
     Region          184..236
                     /region_name="SH3_6"
                     /note="SH3 domain (SH3b1 type); pfam12913"
                     /db_xref="CDD:432871"
     Region          230..421
                     /region_name="NlpC"
                     /note="Cell wall-associated hydrolase, NlpC_P60 family
                     [Cell wall/membrane/envelope biogenesis]; COG0791"
                     /db_xref="CDD:440554"
ORIGIN      
        1 mkiyflllms iflvscsltg kepqglevgt fttknpegld yvdptkaifp mdnysqsidk
       61 wispksekin ipvmdgaaqt rnfanlkshy fgmnkedhsp wnpyyissil sgsdsviikn
      121 dkiikeflsk dsisygenfr vnssvwketv rsnadinidg iyhpsgrgit lretlvrmlp
      181 tddpayddpr eagqgypfdn lqdssvrpgt piyifatsqd knwkyiaspt vtgwvksddv
      241 avvgpkfiad wislaeknlg avikepvsvh qgeqfyftar pgtilpfsse ksgsyqvaip
      301 vrkgdshvei nwvtlkkdqf tampwkmtpa niatlmksms grpygwgnyn fyndcsaeir
      361 slmmpfglfl prnsaqqiqe irvvdlskqp lnkrikylkd hgkpfttliy ieghimlyig
      421 natingeevp mtyqniwglr pkdsssrsii ggsvffpllp fyperpnles lagkevfklg
      481 fie
//
LOCUS       WP_235896121             766 aa            linear   BCT 02-MAR-2025
DEFINITION  TcfC E-set like domain-containing protein [Yersinia alsatica].
ACCESSION   WP_235896121
VERSION     WP_235896121.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028277.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16967.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..766
                     /product="TcfC E-set like domain-containing protein"
                     /calculated_mol_wt=84665
     Region          263..331
                     /region_name="TcfC"
                     /note="E-set like domain; pfam16967"
                     /db_xref="CDD:435681"
     Region          <463..712
                     /region_name="FimD"
                     /note="Outer membrane usher protein FimD/PapC [Cell
                     motility, Extracellular structures]; COG3188"
                     /db_xref="CDD:442421"
ORIGIN      
        1 mentiiarpa llfilllqts nsiyaqniti ehlvpagfsa idehktlqll gifdgkalpg
       61 piffseskna lsfdqqqyrn nhidepsial leqilpqipy lqcengcdyl lsnhrvmldk
      121 vnnvvtitnn nsrylmpvtt wglvhnqsfd vrmtarnysa msargqgylg lplqsygfvq
      181 wfynsvrtkn hypsagqspy qqqtqigmgs wylqknfqal ylragkqnnl dnsagsihtl
      241 inpaldqfit lgsqsylald kpsagslvly atvdgdyeiy rdnqlirrip aqlgrneidy
      301 nrlpggyyni dirlvdhtgr vvsqesqtis nigtqtnhgw fltmgksakr dknkphhlaq
      361 fgrsmaiqni qtnislladd arhwaaegni shplgissln itptlgvmsg ekrsggylrl
      421 nggnstvgyl svaryqtpdi siyapssgst sasysrrvgp tqlsyqfnqy knnqqhriqs
      481 swnwrrpqfg lnlsigaqkg gqwhsqnnyg vfinttlslr qssasinsay trqqlstsan
      541 yqkeftdnhg tsslgisgst sgksngigtf aqrsgsrgdi sarmgvddki anggisyrgm
      601 vaispqgaal grssysgsal liktpelsgt pysfnaegnp itgaglyaip ipryqdrffv
      661 rthnnrsdld mniqlpvniv rahpgqvfvs kaditldily ngflkdsqgr pvsgtiketn
      721 dvvhpnglfa insnvvlkni tvqngsvryh cdmqqqrdhi ylchsn
//
LOCUS       WP_235896125             508 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2867 domain-containing protein [Yersinia alsatica].
ACCESSION   WP_235896125
VERSION     WP_235896125.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022517.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11066.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..508
                     /product="DUF2867 domain-containing protein"
                     /calculated_mol_wt=56679
     Region          6..302
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(10,12..13,15,34..36,74..76,116..118,128,132,
                     151..154)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(88,118,128,132)
                     /site_type="active"
                     /db_xref="CDD:187535"
     Region          340..469
                     /region_name="DUF2867"
                     /note="Protein of unknown function (DUF2867); pfam11066"
                     /db_xref="CDD:431633"
ORIGIN      
        1 mtpqrilvlg asgyigqhli pklsqqghqv iaaarriewl keqpwpgvdc rfvdlyqpat
       61 lhaalqdidv vyylvhgmgd gqdlieqeri aannmkaalq hvastspspv kqviylgasq
      121 pgdsnsthlv arkltgdllr qsgipvtelr asiiigpgsa afevmrdmvy nlpiltpprw
      181 vrsksspval enllvyltel lnhpatenrv fdvagpeyis yqtmferfia isgkrrwlvp
      241 iplptrfisv yfinmitsvp tsiasalieg lnhdlpadgq alqalipqql isfddavket
      301 lrredevvds adwgydpear arwrpgygfy pkqagcqlyt tassealwhv vqqiggkegy
      361 fygnllwktr awmddlaggg vvygrperet lelgdlidgw kvitlkpmrq lammfgmkap
      421 glgrltftik dlggrrsfdv rawwhpagfn gllywfvmmp ahlfifrgma qrittlaeqy
      481 drehqstgpq stsstnkpdi ktvdtsaq
//
LOCUS       WP_235896136             350 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Yersinia alsatica].
ACCESSION   WP_235896136
VERSION     WP_235896136.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 350)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..>350
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          1..>340
                     /region_name="PRK08173"
                     /note="DNA topoisomerase III; Validated"
                     /db_xref="CDD:236172"
ORIGIN      
        1 mtptaireay dtvkdgslyd riddaarcrt egdfivgins sraitafksr qersfqmlav
       61 grvqtpvlsm itqredeist fvqrnfwevm atfgiasgdy ngrwiptndt hnnkesdgsr
      121 ffdqsaakei ldkcrgvqpt svseeskitk thppklfnqt alqieaskry kfsakktldl
      181 iqalyekhkm vsyprtssta lpedygdivl timthlftgs eyekyasyvt annrvdpsnk
      241 aifdndkisd hfaiipaigs qcnvagltpd elkiydlivr rfiaafypva tysaterlti
      301 vagetfkttg rvlleagwqv vikqptdkam nslcaltege iasnkvmglk
//
LOCUS       WP_235896165             278 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme, partial [Acinetobacter baumannii].
ACCESSION   WP_235896165
VERSION     WP_235896165.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 278)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 278)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         1..>278
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          5..>278
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(89..90,93,157,186,189,208,211)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:99738"
     Site            211
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99738"
ORIGIN      
        1 mnqsddleyq ldtlairtgh trsfegehge pifltssfvy enaaeaaakf sgqvqgniys
       61 rftnptvsmf ekrlaaldga eravatssgm gailsiamay lkagdhvics ravfgsival
      121 fekyiakfgv ditfvdlsdl nawknavrpe tkllfvesps nplaeiadiq aladiahang
      181 allavdnsfc tpvlqqplkl gadlviysat kyldgqgral ggavvgnhql leevfsvvrt
      241 lgpsmspfna wiflkgletl rlrmkahcen aqklaewl
//
LOCUS       WP_235895778             257 aa            linear   BCT 02-MAR-2025
DEFINITION  BtpA/SgcQ family protein [Enorma shizhengliae].
ACCESSION   WP_235895778
VERSION     WP_235895778.1
KEYWORDS    RefSeq.
SOURCE      Enorma shizhengliae
  ORGANISM  Enorma shizhengliae
            Bacteria; Bacillati; Actinomycetota; Coriobacteriia;
            Coriobacteriales; Coriobacteriaceae; Enorma.
REFERENCE   1  (residues 1 to 257)
  AUTHORS   Zak,E. and Pakrasi,H.B.
  TITLE     The BtpA protein stabilizes the reaction center proteins of
            photosystem I in the cyanobacterium Synechocystis sp. PCC 6803 at
            low temperature
  JOURNAL   Plant Physiol 123 (1), 215-222 (2000)
   PUBMED   10806238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015402.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03437.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Enorma shizhengliae"
                     /db_xref="taxon:2606615"
     Protein         1..257
                     /product="BtpA/SgcQ family protein"
                     /calculated_mol_wt=28323
     Region          15..253
                     /region_name="BtpA"
                     /note="Membrane biogenesis protein, BtpA/SgcQ family [Cell
                     wall/membrane/envelope biogenesis]; COG0434"
                     /db_xref="CDD:440203"
ORIGIN      
        1 mpdeevvqvm dakgflsvfk erkpvmamlh lkgetpdevl erakreldly ieggvdaviv
       61 edyfgtygdm rraleyirea kseivygvnc lnidamgfel aqefgaafvq ldsvvghvkp
      121 rdeealeafl dlyrarydgc vlggvrfkyq pvlsdrtlee dlaiaqgrcd avavtqdatg
      181 qetsidkirs fraglgdfpl ivaagvtpen areslkiadg avvgsyfkdt yhddgevsld
      241 hvraimdavr avreeta
//
LOCUS       WP_235896335             227 aa            linear   BCT 02-MAR-2025
DEFINITION  DsbA family protein [Yersinia rochesterensis].
ACCESSION   WP_235896335
VERSION     WP_235896335.1
KEYWORDS    RefSeq.
SOURCE      Yersinia rochesterensis
  ORGANISM  Yersinia rochesterensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 227)
  AUTHORS   Laurie,A.D. and Lloyd-Jones,G.
  TITLE     The phn genes of Burkholderia sp. strain RP007 constitute a
            divergent gene cluster for polycyclic aromatic hydrocarbon
            catabolism
  JOURNAL   J Bacteriol 181 (2), 531-540 (1999)
   PUBMED   9882667
REFERENCE   2  (residues 1 to 227)
  AUTHORS   Hu,S.H., Peek,J.A., Rattigan,E., Taylor,R.K. and Martin,J.L.
  TITLE     Structure of TcpG, the DsbA protein folding catalyst from Vibrio
            cholerae
  JOURNAL   J Mol Biol 268 (1), 137-146 (1997)
   PUBMED   9149147
REFERENCE   3  (residues 1 to 227)
  AUTHORS   Brito,B., Palacios,J.M., Ruiz-Argueso,T. and Imperial,J.
  TITLE     Identification of a gene for a chemoreceptor of the
            methyl-accepting type in the symbiotic plasmid of Rhizobium
            leguminosarum bv. viciae UPM791
  JOURNAL   Biochim Biophys Acta 1308 (1), 7-11 (1996)
   PUBMED   8765742
REFERENCE   4  (residues 1 to 227)
  AUTHORS   Eaton,R.W.
  TITLE     Organization and evolution of naphthalene catabolic pathways:
            sequence of the DNA encoding 2-hydroxychromene-2-carboxylate
            isomerase and trans-o-hydroxybenzylidenepyruvate hydratase-aldolase
            from the NAH7 plasmid
  JOURNAL   J Bacteriol 176 (24), 7757-7762 (1994)
   PUBMED   8002605
REFERENCE   5  (residues 1 to 227)
  AUTHORS   Denome,S.A., Stanley,D.C., Olson,E.S. and Young,K.D.
  TITLE     Metabolism of dibenzothiophene and naphthalene in Pseudomonas
            strains: complete DNA sequence of an upper naphthalene catabolic
            pathway
  JOURNAL   J Bacteriol 175 (21), 6890-6901 (1993)
   PUBMED   8226631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01323.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Yersinia rochesterensis"
                     /db_xref="taxon:1604335"
     Protein         1..227
                     /product="DsbA family protein"
                     /GO_function="GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=25642
     Region          53..219
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 msteknmfrs kgffigytll vilisslitt ayfhyfvlnq deqetlfavs ssevenspik
       61 ddktiieifs ygchycaine envtqlenrm pegtrfvrlh issdkttglg rfapifatls
      121 vmgiepqhrq saykavledn idlsdnsqle twlkangidv aqyqqvsqsa evkeliaymt
      181 avtahykida tptfivgkkw lalqdrqfpa fsdhllslle hdkalek
//
LOCUS       WP_235896355             130 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Yersinia
            rochesterensis].
ACCESSION   WP_235896355
VERSION     WP_235896355.1
KEYWORDS    RefSeq.
SOURCE      Yersinia rochesterensis
  ORGANISM  Yersinia rochesterensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Yersinia rochesterensis"
                     /db_xref="taxon:1604335"
     Protein         <1..>130
                     /product="ABC transporter substrate-binding protein"
     Region          <2..>130
                     /region_name="PRK15104"
                     /note="oligopeptide ABC transporter substrate-binding
                     protein OppA; Provisional"
                     /db_xref="CDD:185059"
ORIGIN      
        1 shtsmkpvkr dvvekygdkw tlpqnfvgng ayklkdwvvn erivlerspt ywnnkdtiin
       61 katflpitse vsdinryrsg eiditnsaip pnlfakmkkd lpeqvhvspy lctfyyeinn
      121 qktpftdarv
//
LOCUS       WP_235895698             105 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleotide kinase domain-containing protein [Yersinia alsatica].
ACCESSION   WP_235895698
VERSION     WP_235895698.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 105)
  AUTHORS   Lee,Y.J., Dai,N., Muller,S.I., Guan,C., Parker,M.J., Fraser,M.E.,
            Walsh,S.E., Sridar,J., Mulholland,A., Nayak,K., Sun,Z., Lin,Y.C.,
            Comb,D.G., Marks,K., Gonzalez,R., Dowling,D.P., Bandarian,V.,
            Saleh,L., Correa,I.R. and Weigele,P.R.
  TITLE     Pathways of thymidine hypermodification
  JOURNAL   Nucleic Acids Res 50 (6), 3001-3017 (2022)
   PUBMED   34522950
REFERENCE   2  (residues 1 to 105)
  AUTHORS   Lee,Y.J., Dai,N., Walsh,S.E., Muller,S., Fraser,M.E.,
            Kauffman,K.M., Guan,C., Correa,I.R. Jr. and Weigele,P.R.
  TITLE     Identification and biosynthesis of thymidine hypermodifications in
            the genomic DNA of widespread bacterial viruses
  JOURNAL   Proc Natl Acad Sci U S A 115 (14), E3116-E3125 (2018)
   PUBMED   29555775
REFERENCE   3  (residues 1 to 105)
  AUTHORS   Iyer,L.M., Zhang,D., Burroughs,A.M. and Aravind,L.
  TITLE     Computational identification of novel biochemical systems involved
            in oxidation, glycosylation and other complex modifications of
            bases in DNA
  JOURNAL   Nucleic Acids Res 41 (16), 7635-7655 (2013)
   PUBMED   23814188
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18723.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..105
                     /product="nucleotide kinase domain-containing protein"
                     /calculated_mol_wt=12504
ORIGIN      
        1 mfifvisgpg cerginwifs nrdgmnseec lfwftinqdr iadkynekwd mneifhflpk
       61 eervytlmdm ensgaceidk rcrtkfdskr pkqkynylsn nlilv
//
LOCUS       WP_235896363             214 aa            linear   BCT 02-MAR-2025
DEFINITION  oligogalacturonate-specific porin KdgM family protein, partial
            [Yersinia rochesterensis].
ACCESSION   WP_235896363
VERSION     WP_235896363.1
KEYWORDS    RefSeq.
SOURCE      Yersinia rochesterensis
  ORGANISM  Yersinia rochesterensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 214)
  AUTHORS   Blot,N., Berrier,C., Hugouvieux-Cotte-Pattat,N., Ghazi,A. and
            Condemine,G.
  TITLE     The oligogalacturonate-specific porin KdgM of Erwinia chrysanthemi
            belongs to a new porin family
  JOURNAL   J Biol Chem 277 (10), 7936-7944 (2002)
   PUBMED   11773048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017942.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06178.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Yersinia rochesterensis"
                     /db_xref="taxon:1604335"
     Protein         <1..214
                     /product="oligogalacturonate-specific porin KdgM family
                     protein"
     Region          4..214
                     /region_name="KdgM"
                     /note="Oligogalacturonate-specific porin protein (KdgM);
                     cl11629"
                     /db_xref="CDD:416341"
ORIGIN      
        1 vattidyrhe mkdtsksdhk drllfsnrfa ngfglslegk wgqhssdttp nkpfneqvsn
       61 gtevvasyvy kinktfqvep gfsldstsds nnyrpyvrgk vaftddfsts lryrpyykrn
      121 qpaqtkktek gheftmlfay nflkdysaey elnykksede ilankekyew ahdvkiaykw
      181 dkswkpyvai gnvpgskatd erqtryrvgv qysf
//
LOCUS       WP_235896501             329 aa            linear   BCT 02-MAR-2025
DEFINITION  SAM-dependent methyltransferase [Oceanidesulfovibrio marinus].
ACCESSION   WP_235896501
VERSION     WP_235896501.1
KEYWORDS    RefSeq.
SOURCE      Oceanidesulfovibrio marinus
  ORGANISM  Oceanidesulfovibrio marinus
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Oceanidesulfovibrio.
REFERENCE   1  (residues 1 to 329)
  AUTHORS   Bugl,H., Fauman,E.B., Staker,B.L., Zheng,F., Kushner,S.R.,
            Saper,M.A., Bardwell,J.C. and Jakob,U.
  TITLE     RNA methylation under heat shock control
  JOURNAL   Mol Cell 6 (2), 349-360 (2000)
   PUBMED   10983982
REFERENCE   2  (residues 1 to 329)
  AUTHORS   Koonin,E.V.
  TITLE     Computer-assisted identification of a putative methyltransferase
            domain in NS5 protein of flaviviruses and lambda 2 protein of
            reovirus
  JOURNAL   J Gen Virol 74 (Pt 4), 733-740 (1993)
   PUBMED   8385698
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013856.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01728.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Oceanidesulfovibrio marinus"
                     /db_xref="taxon:370038"
     Protein         1..329
                     /product="SAM-dependent methyltransferase"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=36519
     Region          <143..286
                     /region_name="RlmM"
                     /note="23S rRNA C2498 (ribose-2'-O)-methylase RlmM
                     [Translation, ribosomal structure and biogenesis];
                     COG2933"
                     /db_xref="CDD:442177"
ORIGIN      
        1 mndamqqsgd slggtiylap kgfeaelehe vrteleaedp qaaadvware rlvfapgpyr
       61 pmawaqnawl epwripfdsi kegaralkai qrnwsltsia ehrraaliae alppvkgrpl
      121 efgetppasp lggwtlldrn tiiaapqtts pfpqgevhfv edksgppnra ylklweaftr
      181 fgapepgsrc ldlgaspggw twvlaqlgcn vtavdrssla pelmrnplvt frtgsafgvd
      241 prrvreeyge vdwlvwdvac ypkrlltwvr rwldagpecs mvctlkfqge tdmdsvfafk
      301 ripgsrlvhl thnkheltwv rlaggaplp
//
LOCUS       WP_235896541             391 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-grasp domain-containing protein [Oceanidesulfovibrio marinus].
ACCESSION   WP_235896541
VERSION     WP_235896541.1
KEYWORDS    RefSeq.
SOURCE      Oceanidesulfovibrio marinus
  ORGANISM  Oceanidesulfovibrio marinus
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Oceanidesulfovibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024925.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13535.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Oceanidesulfovibrio marinus"
                     /db_xref="taxon:370038"
     Protein         1..391
                     /product="ATP-grasp domain-containing protein"
                     /calculated_mol_wt=44179
     Region          123..282
                     /region_name="ATP-grasp_4"
                     /note="ATP-grasp domain; pfam13535"
                     /db_xref="CDD:316093"
ORIGIN      
        1 mpmfilddpy vsdflkqtvl srkgavldna karvslndea sdvrllddee faaearkapr
       61 iyansenaig wiaanladtn lpamidvfkd kvafrdliap lypdyfykgv ayddlddvdp
      121 eelfypcvvk pavgffslgv hrvesaadwk pivqkirdev erirqyyppe vldvdrfvie
      181 qciegeefav dafydgdgnv vivnilghlf asaddvsdrv yitspsiier wrepftefla
      241 elgrranlad fpvhvemrvd enghiapiev npmrfagwcv tdlayhaygv npyacyldga
      301 apdwerilpq regnvyavvv adiapdvdca sivqvnyeef knrfstplel rpvdykrygv
      361 faflfaqare ddlselhail gsdlkefmkl g
//
LOCUS       WP_235896555             374 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-binding dehydrogenase [Oceanidesulfovibrio marinus].
ACCESSION   WP_235896555
VERSION     WP_235896555.1
KEYWORDS    RefSeq.
SOURCE      Oceanidesulfovibrio marinus
  ORGANISM  Oceanidesulfovibrio marinus
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Oceanidesulfovibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00107.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Oceanidesulfovibrio marinus"
                     /db_xref="taxon:370038"
     Protein         1..374
                     /product="zinc-binding dehydrogenase"
                     /calculated_mol_wt=40359
     Region          27..362
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
     Site            order(65..67,70,170,174,195..200,219..220,224,239,
                     263..264,286..287,311..313)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176178"
ORIGIN      
        1 mqteiqditf plfkntsmes ikhprrmvaa ileqqraplv idevelperl tcgqvlvrvl
       61 ysgicgsqlg eidgvkgedr ylphllgheg vgevlqvgeg vrfvhpgqrv vlhwrkgagm
      121 eavpatykwr nkqlnagwvt tfnqytivse nrltpvdddv dteilpllgc avttgfgvvt
      181 nnakvsigds vvvfgaggvg lnviqgavla gaypivaidl ydnrlelaar lgathcings
      241 sqdvmqtiqd ivgksgadvc idntgntkvi smaysltapq grtvlvgvph knddasihtl
      301 plhfgktltg shggesrpel dipryvkllr agklqlreci tevfaleein taiermrsge
      361 lagrclinch pdlg
//
LOCUS       WP_235896625             287 aa            linear   BCT 02-MAR-2025
DEFINITION  tape measure protein, partial [Acinetobacter baumannii].
ACCESSION   WP_235896625
VERSION     WP_235896625.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040129.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20155.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         1..>287
                     /product="tape measure protein"
     Region          56..247
                     /region_name="TMP_3"
                     /note="Tape measure protein; pfam20155"
                     /db_xref="CDD:466312"
ORIGIN      
        1 mvividsqna ernarnlgne lvsierkgef asksmdslsv atralaghma glltvgsais
       61 kmdtytglqn rlklvtnnqv elnkatedtf riaqktysaw dsvlqvyqrf sdnaktlnlt
      121 mddtarltet vskavaisga saeaadaalv qfgqalasgt lrgeelnsvm eqtpalakai
      181 akgmgitvge lrsvaaegki tsqeivkalr nvesdvdalf aktditigqs ltllnneitk
      241 fvgeagkgsg aaqvlagsvq tlasnldlia dgalvvgigy itrailm
//
LOCUS       WP_235896615             314 aa            linear   BCT 02-MAR-2025
DEFINITION  shufflon system plasmid conjugative transfer pilus tip adhesin
            PilV, partial [Yersinia vastinensis].
ACCESSION   WP_235896615
VERSION     WP_235896615.1
KEYWORDS    RefSeq.
SOURCE      Yersinia vastinensis
  ORGANISM  Yersinia vastinensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 314)
  AUTHORS   Komano,T.
  TITLE     Shufflons: multiple inversion systems and integrons
  JOURNAL   Annu Rev Genet 33, 171-191 (1999)
   PUBMED   10690407
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016785.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04917.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Yersinia vastinensis"
                     /db_xref="taxon:2890318"
     gene            <1..314
                     /gene="pilV"
     Protein         <1..314
                     /product="shufflon system plasmid conjugative transfer
                     pilus tip adhesin PilV"
     Region          <67..263
                     /region_name="Shufflon_N"
                     /note="Bacterial shufflon protein, N-terminal constant
                     region; pfam04917"
                     /db_xref="CDD:309860"
ORIGIN      
        1 sideissyyn dnrtdslsnd vllkrsgiap nyvingllmt taiwneggkv rygllgkamq
       61 sagidsgmtr sptvasgygg qwnekssdys nittegllay rvgydssmys vylrrdgtlp
      121 mtgdlnmggk sinnakdita agtviaeifk stgstnvgga livvgnstlt gaveakstls
      181 vsgasayggi vqvnnvinat gninttadin skrvysgyiq stgritsdey vqingiavsg
      241 aacspnglig rsntggtlfc qsgawrsggm ninfdavkyv yvgdggevsc qpyccrrrwf
      301 lcnlhsglsl lcsg
//
LOCUS       WP_235896648              97 aa            linear   BCT 02-MAR-2025
DEFINITION  type II toxin-antitoxin system RelB/DinJ family antitoxin, partial
            [Yersinia vastinensis].
ACCESSION   WP_235896648
VERSION     WP_235896648.1
KEYWORDS    RefSeq.
SOURCE      Yersinia vastinensis
  ORGANISM  Yersinia vastinensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 97)
  AUTHORS   Pedersen,K., Christensen,S.K. and Gerdes,K.
  TITLE     Rapid induction and reversal of a bacteriostatic condition by
            controlled expression of toxins and antitoxins
  JOURNAL   Mol Microbiol 45 (2), 501-510 (2002)
   PUBMED   12123459
REFERENCE   2  (residues 1 to 97)
  AUTHORS   Galvani,C., Terry,J. and Ishiguro,E.E.
  TITLE     Purification of the RelB and RelE proteins of Escherichia coli:
            RelE binds to RelB and to ribosomes
  JOURNAL   J Bacteriol 183 (8), 2700-2703 (2001)
   PUBMED   11274135
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016136.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04221.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Yersinia vastinensis"
                     /db_xref="taxon:2890318"
     Protein         <1..97
                     /product="type II toxin-antitoxin system RelB/DinJ family
                     antitoxin"
     Region          8..72
                     /region_name="RelB"
                     /note="RelB antitoxin; cl01171"
                     /db_xref="CDD:445300"
ORIGIN      
        1 rspmeariqf rigedtkrla qqsadrrgvt lsdacrsfae glaeeqrkve eqnqwlkkev
       61 naafekldsg nasfmnqnea kvvmekrkae irakagr
//
LOCUS       WP_235896670             167 aa            linear   BCT 02-MAR-2025
DEFINITION  MauE/DoxX family redox-associated membrane protein
            [Oceanidesulfovibrio marinus].
ACCESSION   WP_235896670
VERSION     WP_235896670.1
KEYWORDS    RefSeq.
SOURCE      Oceanidesulfovibrio marinus
  ORGANISM  Oceanidesulfovibrio marinus
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Oceanidesulfovibrio.
REFERENCE   1  (residues 1 to 167)
  AUTHORS   van der Palen,C.J., Reijnders,W.N., de Vries,S., Duine,J.A. and van
            Spanning,R.J.
  TITLE     MauE and MauD proteins are essential in methylamine metabolism of
            Paracoccus denitrificans
  JOURNAL   Antonie Van Leeuwenhoek 72 (3), 219-228 (1997)
   PUBMED   9403107
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018942.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07291.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Oceanidesulfovibrio marinus"
                     /db_xref="taxon:370038"
     Protein         1..167
                     /product="MauE/DoxX family redox-associated membrane
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0030416 - methylamine metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=17886
     Region          27..>120
                     /region_name="DoxX"
                     /note="cl21527"
                     /db_xref="CDD:451291"
ORIGIN      
        1 mlkqtppsrn ipavvdallh grfayriarf ilaaaflvag viklsdpdaf aetiaafgil
       61 paplvdwaal llpiievlaa iallwdargg lsvitaltlv fiavlgyglw lgldidcgcy
      121 gpgdpdaeaf sslrtslyrd fvllgiagyc mswrmmnrrt vpaskhq
//
LOCUS       WP_235896722             866 aa            linear   BCT 02-MAR-2025
DEFINITION  PEP/pyruvate-binding domain-containing protein [Oceanidesulfovibrio
            marinus].
ACCESSION   WP_235896722
VERSION     WP_235896722.1
KEYWORDS    RefSeq.
SOURCE      Oceanidesulfovibrio marinus
  ORGANISM  Oceanidesulfovibrio marinus
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Oceanidesulfovibrio.
REFERENCE   1  (residues 1 to 866)
  AUTHORS   Lim,K., Read,R.J., Chen,C.C., Tempczyk,A., Wei,M., Ye,D., Wu,C.,
            Dunaway-Mariano,D. and Herzberg,O.
  TITLE     Swiveling domain mechanism in pyruvate phosphate dikinase
  JOURNAL   Biochemistry 46 (51), 14845-14853 (2007)
   PUBMED   18052212
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01326.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..866
                     /organism="Oceanidesulfovibrio marinus"
                     /db_xref="taxon:370038"
     Protein         1..866
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0016310 - phosphorylation [Evidence IEA]"
                     /calculated_mol_wt=97129
     Region          112..555
                     /region_name="PpsA"
                     /note="Phosphoenolpyruvate synthase/pyruvate phosphate
                     dikinase [Carbohydrate transport and metabolism]; COG0574"
                     /db_xref="CDD:440339"
ORIGIN      
        1 mnllnvlafw rpkkppvsft tlfrkfkgli ernnrilelm gdmgdklgge yvfdkqyils
       61 sceqledlvf klisdlsvln qdknvelfka yerirhaihe elsgrhafdq vsltiplesl
      121 dqgtvdaags klnnlgiirn tlghrvpdgf vattkaffaf ldhnglrrti heavtawdgk
      181 deaafdqmcv eirekilkad ipkplaadim geadalvsrl rregdkgphl favrssawge
      241 deessfagqy eselgirqeg lldaykmvva gayspqawry riikgfheee lamgvgfqlm
      301 iaaecsgtlq typadpsqke vmvvnctpgl gaplmggvik sdtfyierla pfavrsthte
      361 ikdqllelnp eggtvwknls qdegktpcis keqlvqlara gldiesflkr pveaewcyda
      421 dgelyilqar pirfelqadt lppppapdve dtlmagqgii vqqgvasgkv fvvendedlh
      481 dfpygailvs hftsprfsri mshargiitd igspaghmat iarehrvpti vnagdattrl
      541 qtgeeitlda gnnvvyrgiv pglrryelts qcvfeesyey rllrrllkri tplhlvdpks
      601 ddfrpsnctt fhditryihe kavseliqls errelhetkp rrlnlhmslg ltvidvedgm
      661 cktdedlelk hvlsvplksl ldgmcqpgmw ctrpvsvdls sfmssftrtf svaatsrigr
      721 nlavvskeyl nlhlqlgyhy niidaflses endnyiyfrf lggvtdierr srrasfiaev
      781 lerfdfrvev rgdlvvgrik kislargiek mnmlgglvgy trqldvvlqs dedvqdhlav
      841 fmqqisnglg eqdeqgqres sntytg
//
LOCUS       WP_235896324              94 aa            linear   BCT 02-MAR-2025
DEFINITION  U32 family peptidase C-terminal domain-containing protein, partial
            [Yersinia rochesterensis].
ACCESSION   WP_235896324
VERSION     WP_235896324.1
KEYWORDS    RefSeq.
SOURCE      Yersinia rochesterensis
  ORGANISM  Yersinia rochesterensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 94)
  AUTHORS   Trillo-Muyo,S., Jasilionis,A., Domagalski,M.J., Chruszcz,M.,
            Minor,W., Kuisiene,N., Arolas,J.L., Sola,M. and Gomis-Ruth,F.X.
  TITLE     Ultratight crystal packing of a 10 kDa protein
  JOURNAL   Acta Crystallogr D Biol Crystallogr 69 (Pt 3), 464-470 (2013)
   PUBMED   23519421
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027649.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16325.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Yersinia rochesterensis"
                     /db_xref="taxon:1604335"
     Protein         <1..94
                     /product="U32 family peptidase C-terminal
                     domain-containing protein"
     Region          <1..83
                     /region_name="PRK15452"
                     /note="putative protease; Provisional"
                     /db_xref="CDD:237969"
ORIGIN      
        1 qfvgeftgvr rdgqaevivk nkfsvgdsve lmtpqgniqf ilesmqdkkg qpadiapgng
       61 himylpiped inveygllir nlngtnsrnp heka
//
LOCUS       WP_235896725             344 aa            linear   BCT 02-MAR-2025
DEFINITION  4Fe-4S dicluster domain-containing protein [Oceanidesulfovibrio
            marinus].
ACCESSION   WP_235896725
VERSION     WP_235896725.1
KEYWORDS    RefSeq.
SOURCE      Oceanidesulfovibrio marinus
  ORGANISM  Oceanidesulfovibrio marinus
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Oceanidesulfovibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024644.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13247.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Oceanidesulfovibrio marinus"
                     /db_xref="taxon:370038"
     Protein         1..344
                     /product="4Fe-4S dicluster domain-containing protein"
                     /calculated_mol_wt=36661
     Region          43..231
                     /region_name="DMSOR_beta-like"
                     /note="Beta subunit of the DMSO Reductase (DMSOR) family;
                     cl25360"
                     /db_xref="CDD:355383"
     Site            order(45,52..55,57..58,62,66,106,108,125,128..131,136,
                     140..141,144..145,153,163..166,170..172,174..175,197,
                     199..203,215,219,224)
                     /site_type="other"
                     /note="Fe-S cluster binding site [ion binding]"
                     /db_xref="CDD:319870"
ORIGIN      
        1 msrkkstisr rsflrgaaia gvgaaaapvl aragaqdakg eelatlldis kcvgcgacvv
       61 acgeanesry pkpekpfpem vpprvkvadw sddryvddrl tpynwlfvdn itvnhegteh
      121 eihmprrcmh ctnppcanlc pwgaaakkdd gavvidpdvc lggskcksvc pwdipqrqtg
      181 vglyldllpr fagngvmfkc drcqprmaeg klpacieacp mqvqqigprs eiiakakala
      241 aemngyiygl eenggtntiy vspvpfekle qarakvapsa gkkgkgkhag kgknsgrpnl
      301 kqvgspfeke dmfaaavfta pvaglaagai rllrktqsgh geds
//
LOCUS       WP_235896766              57 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Oceanidesulfovibrio marinus].
ACCESSION   WP_235896766
VERSION     WP_235896766.1
KEYWORDS    RefSeq.
SOURCE      Oceanidesulfovibrio marinus
  ORGANISM  Oceanidesulfovibrio marinus
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Oceanidesulfovibrio.
REFERENCE   1  (residues 1 to 57)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..57
                     /organism="Oceanidesulfovibrio marinus"
                     /db_xref="taxon:370038"
     Protein         1..>57
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>57
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 mgkakyersk phvnvgtvgh idhgkttlta aitkilsmka ggsyiafdei dkapeek
//
LOCUS       WP_235896768             150 aa            linear   BCT 02-MAR-2025
DEFINITION  integrase core domain-containing protein, partial
            [Oceanidesulfovibrio marinus].
ACCESSION   WP_235896768
VERSION     WP_235896768.1
KEYWORDS    RefSeq.
SOURCE      Oceanidesulfovibrio marinus
  ORGANISM  Oceanidesulfovibrio marinus
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Oceanidesulfovibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025063.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13683.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Oceanidesulfovibrio marinus"
                     /db_xref="taxon:370038"
     Protein         <1..>150
                     /product="integrase core domain-containing protein"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <1..144
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 vidchsryaw grlyttklpv tavhvlnedv lpffeehaar istilsdngr efcgrpdrhp
       61 yelflqlegi ehrttqvrrp qsngfverlh rtlldehfri kgrekwyesv eemqedldsy
      121 lnhynrerth qgrgmngrvp yqafldgivn
//
LOCUS       WP_235896781             161 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Oceanidesulfovibrio
            marinus].
ACCESSION   WP_235896781
VERSION     WP_235896781.1
KEYWORDS    RefSeq.
SOURCE      Oceanidesulfovibrio marinus
  ORGANISM  Oceanidesulfovibrio marinus
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Oceanidesulfovibrio.
REFERENCE   1  (residues 1 to 161)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Oceanidesulfovibrio marinus"
                     /db_xref="taxon:370038"
     Protein         <1..161
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..160
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            7..40
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 indiddqtnl lalnaaieaa rageagrgfa vvadevrkla ektmsatsev gsaireiqeg
       61 arrnmqvvdv aaeaveqsse ladesgrslg qivdlvvttt drvqsiataa eeqsasseei
      121 sqavsevnri aqetarsmde vssavrglmd qadrlrnias s
//
LOCUS       WP_235896638             143 aa            linear   BCT 02-MAR-2025
DEFINITION  GspL/Epsl periplasmic domain-containing protein, partial [Yersinia
            vastinensis].
ACCESSION   WP_235896638
VERSION     WP_235896638.1
KEYWORDS    RefSeq.
SOURCE      Yersinia vastinensis
  ORGANISM  Yersinia vastinensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 143)
  AUTHORS   Abendroth,J., Kreger,A.C. and Hol,W.G.
  TITLE     The dimer formed by the periplasmic domain of EpsL from the Type 2
            Secretion System of Vibrio parahaemolyticus
  JOURNAL   J Struct Biol 168 (2), 313-322 (2009)
   PUBMED   19646531
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024105.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12693.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Yersinia vastinensis"
                     /db_xref="taxon:2890318"
     Protein         <1..143
                     /product="GspL/Epsl periplasmic domain-containing protein"
ORIGIN      
        1 islcfllsiv mllnslyyky eiirnidmln tasrefyaky pslkgyrlnd tqpnvdelsn
       61 nkgsydfinl lhaastvvra kglvinninf nshdreviln inatednind sklrsdklrl
      121 dkiritktpn ddetynlafk ypl
//
LOCUS       WP_235896785             104 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Oceanidesulfovibrio marinus].
ACCESSION   WP_235896785
VERSION     WP_235896785.1
KEYWORDS    RefSeq.
SOURCE      Oceanidesulfovibrio marinus
  ORGANISM  Oceanidesulfovibrio marinus
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Oceanidesulfovibrio.
REFERENCE   1  (residues 1 to 104)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 104)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 104)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 104)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Oceanidesulfovibrio marinus"
                     /db_xref="taxon:370038"
     Protein         1..>104
                     /product="ATP-binding protein"
     Region          <1..>104
                     /region_name="PRK11107"
                     /note="hybrid sensory histidine kinase BarA; Provisional"
                     /db_xref="CDD:236848"
ORIGIN      
        1 mtiasapfdl pdasrsveti fssaakkkgl alqfkiddsl pmmlsgdkir lkkilnnlvg
       61 naikfteqge vgvkahhlpa qkrifvsiad tgpgidetqi etlf
//
LOCUS       WP_235896789             173 aa            linear   BCT 02-MAR-2025
DEFINITION  dihydropteroate synthase, partial [Oceanidesulfovibrio marinus].
ACCESSION   WP_235896789
VERSION     WP_235896789.1
KEYWORDS    RefSeq.
SOURCE      Oceanidesulfovibrio marinus
  ORGANISM  Oceanidesulfovibrio marinus
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Oceanidesulfovibrio.
REFERENCE   1  (residues 1 to 173)
  AUTHORS   Doukov,T., Seravalli,J., Stezowski,J.J. and Ragsdale,S.W.
  TITLE     Crystal structure of a methyltetrahydrofolate- and
            corrinoid-dependent methyltransferase
  JOURNAL   Structure 8 (8), 817-830 (2000)
   PUBMED   10997901
REFERENCE   2  (residues 1 to 173)
  AUTHORS   Achari,A., Somers,D.O., Champness,J.N., Bryant,P.K., Rosemond,J.
            and Stammers,D.K.
  TITLE     Crystal structure of the anti-bacterial sulfonamide drug target
            dihydropteroate synthase
  JOURNAL   Nat Struct Biol 4 (6), 490-497 (1997)
   PUBMED   9187658
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013007.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00809.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Oceanidesulfovibrio marinus"
                     /db_xref="taxon:370038"
     Protein         1..>173
                     /product="dihydropteroate synthase"
                     /EC_number="2.5.1.15"
     Region          <2..>119
                     /region_name="FolP"
                     /note="Dihydropteroate synthase [Coenzyme transport and
                     metabolism]; COG0294"
                     /db_xref="CDD:440063"
ORIGIN      
        1 maaqsldags fivndvsscl fdpalrdvlv knkpgyvlmq slgkpgpmqn apqddyvvey
       61 vfrffeqeic alvraglped rivlepgigf gttlehnlal iatlerfgal grpllmalst
      121 qervgedagf wsagsrksep grhgpflvat vshpprprcg adrtviargt rag
//
LOCUS       WP_235896794             148 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Oceanidesulfovibrio marinus].
ACCESSION   WP_235896794
VERSION     WP_235896794.1
KEYWORDS    RefSeq.
SOURCE      Oceanidesulfovibrio marinus
  ORGANISM  Oceanidesulfovibrio marinus
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Oceanidesulfovibrio.
REFERENCE   1  (residues 1 to 148)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 148)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 148)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 148)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Oceanidesulfovibrio marinus"
                     /db_xref="taxon:370038"
     Protein         1..>148
                     /product="ATP-binding protein"
     Region          <10..82
                     /region_name="HATPase"
                     /note="Histidine kinase-like ATPase domain; cl00075"
                     /db_xref="CDD:469604"
     Region          <19..>147
                     /region_name="PRK15347"
                     /note="two component system sensor kinase"
                     /db_xref="CDD:237951"
     Site            order(36,57)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340391"
ORIGIN      
        1 matyalpapd kgtarvllsi satgpgieda sfetlfdsft qaharftrsh qgagpglail
       61 kqlvtpmggt tavesepgkg ttlhigmtfs vveedaldrg tasqpimnpg reglrvllvd
      121 dymisqfsie vilkkrghsv ataingks
//
LOCUS       WP_235896881             992 aa            linear   BCT 02-MAR-2025
DEFINITION  tape measure protein, partial [Acinetobacter baumannii].
ACCESSION   WP_235896881
VERSION     WP_235896881.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040129.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20155.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..>992
                     /product="tape measure protein"
     Region          10..>668
                     /region_name="HI1514"
                     /note="Phage tail tape-measure protein, controls tail
                     length [Mobilome: prophages, transposons]; COG3941"
                     /db_xref="CDD:443141"
     Region          54..245
                     /region_name="TMP_3"
                     /note="Tape measure protein; pfam20155"
                     /db_xref="CDD:466312"
     Region          <706..>773
                     /region_name="NlpD"
                     /note="Murein DD-endopeptidase MepM and murein hydrolase
                     activator NlpD, contains LysM domain [Cell
                     wall/membrane/envelope biogenesis]; COG0739"
                     /db_xref="CDD:440502"
     Region          <807..>991
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
ORIGIN      
        1 ividsqnaer narnlgnelv sierkgefas ksmdslsvat ralaghmagl ltvgsaiskm
       61 dtytglqnrl klvtnnqvel nkatedtfri aqktysawds vlqvyqrfsd naktlnltmd
      121 dtarltetvs kavaisgasa eaadaalvqf gqalasgtlr geelnsvmeq tpalakaiak
      181 gmgitvgelr svaaegkits qeivkalrnv esdvdalfak tditigqslt llnneitkfv
      241 geagkgsgaa qvlagsvqtl asnldliadg alvvgigyit railmksaai kegmastlas
      301 rqasvlnaqa eyaeataaln aakahlanvr atnaetqakf gataaatrya qaqaavtaat
      361 naqtaaqikl ntatsiagrl akgafgligg wagvatlgvm glaaaysyfn nkaeeakqkl
      421 aeqakvaeka deelkkltgn dkakavndlt tafnaqnkal ekssravgsa lidienyarg
      481 nrevekisqe artgtisyte aierlnkikl ptdlyenlkk qaaqyddnas kaslsaeklk
      541 llrvevklgg neaqnaaiqh qkqadalgnt ateaekatka lqdyqakqkd svidsiyksg
      601 wldkgytvaq anailelqka kgmsailskd eidsalrnlk iieeqqered klteakrkqt
      661 qeiekqaklt krlvgisgqs gigtgphldv ryggslsgqk vsnehlarlq aggkpltsyk
      721 issnygprka ptkgassfhk gidfsmpegt pittnvavkd iktwydskgg gyvsevifed
      781 gvslkllhqs pkmqskvkgg askgsdkaag diqsqlerqq dlqrslenev asevgrinnn
      841 rkarledvdk anfspertae ikaeinrrad ndiaiakqal rtkledykef qkteeqllee
      901 sfnrkkfnaa hdlelskfeq kqavelleqq kqqelgllkl aqeqrlfqar lsllsetqam
      961 qeryrleree ilkntklsie erqklialsk an
//
LOCUS       WP_235896956              82 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2243 domain-containing protein [Cereibacter sphaeroides].
ACCESSION   WP_235896956
VERSION     WP_235896956.1
KEYWORDS    RefSeq.
SOURCE      Cereibacter sphaeroides
  ORGANISM  Cereibacter sphaeroides
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Cereibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021516.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10002.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Cereibacter sphaeroides"
                     /db_xref="taxon:1063"
     Protein         1..82
                     /product="DUF2243 domain-containing protein"
                     /calculated_mol_wt=8589
     Region          <4..>54
                     /region_name="DUF2243"
                     /note="Predicted membrane protein (DUF2243); cl01783"
                     /db_xref="CDD:470340"
ORIGIN      
        1 matsagypph svenlqlntq ldrlfhtaty lcllgglvll wraarrphal wpapsparss
       61 wgsassasak gvashqvlgi tv
//
LOCUS       WP_235896983             153 aa            linear   BCT 02-MAR-2025
DEFINITION  toxin-activating lysine-acyltransferase [Yersinia vastinensis].
ACCESSION   WP_235896983
VERSION     WP_235896983.1
KEYWORDS    RefSeq.
SOURCE      Yersinia vastinensis
  ORGANISM  Yersinia vastinensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Trent,M.S., Worsham,L.M. and Ernst-Fonberg,M.L.
  TITLE     HlyC, the internal protein acyltransferase that activates hemolysin
            toxin: role of conserved histidine, serine, and cysteine residues
            in enzymatic activity as probed by chemical modification and
            site-directed mutagenesis
  JOURNAL   Biochemistry 38 (11), 3433-3439 (1999)
   PUBMED   10079090
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014813.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02794.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Yersinia vastinensis"
                     /db_xref="taxon:2890318"
     Protein         1..153
                     /product="toxin-activating lysine-acyltransferase"
                     /GO_component="GO:0005737 - cytoplasm [Evidence IEA]"
                     /GO_function="GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009404 - toxin metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=17597
     Region          14..152
                     /region_name="HlyC"
                     /note="ACP:hemolysin acyltransferase (hemolysin-activating
                     protein) [Posttranslational modification, protein
                     turnover, chaperones]; COG2994"
                     /db_xref="CDD:442233"
ORIGIN      
        1 mdnkinstip lspeiqniig gvmlltrysp lhllysvsew qqrivtslll nqfryyetkn
       61 gkpiafcnwa llsddnlsal isgerdinin dwqsgdnlff pemiapyghv rliatdlrrn
      121 iflykkgdia cairgriydk dceiepkiqw fti
//
LOCUS       WP_235897035             115 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Acinetobacter
            baumannii].
ACCESSION   WP_235897035
VERSION     WP_235897035.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..>115
                     /product="Ig-like domain-containing protein"
     Region          <2..67
                     /region_name="Ca_tandemer"
                     /note="Ca2+-stabilized adhesin repeat; NF033510"
                     /db_xref="CDD:411149"
     Region          <48..>111
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 tndstpaltg tvndptatvv vtvdgtdypa mnngdgtwtl adntlptlad gphtitvtat
       61 dpagnagtdt avvtidttap napvidpina tdpvtgtaea gstvtvtypd gttat
//
LOCUS       WP_235897010             193 aa            linear   BCT 02-MAR-2025
DEFINITION  tight adherence pilus pseudopilin TadF [Yersinia vastinensis].
ACCESSION   WP_235897010
VERSION     WP_235897010.1
KEYWORDS    RefSeq.
SOURCE      Yersinia vastinensis
  ORGANISM  Yersinia vastinensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 193)
  AUTHORS   Tomich,M., Fine,D.H. and Figurski,D.H.
  TITLE     The TadV protein of Actinobacillus actinomycetemcomitans is a novel
            aspartic acid prepilin peptidase required for maturation of the
            Flp1 pilin and TadE and TadF pseudopilins
  JOURNAL   J Bacteriol 188 (19), 6899-6914 (2006)
   PUBMED   16980493
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028274.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16964.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Yersinia vastinensis"
                     /db_xref="taxon:2890318"
     gene            1..193
                     /gene="tadF"
     Protein         1..193
                     /product="tight adherence pilus pseudopilin TadF"
                     /calculated_mol_wt=21646
     Region          9..187
                     /region_name="TadF"
                     /note="Putative tight adherence pilin protein F;
                     pfam16964"
                     /db_xref="CDD:435679"
ORIGIN      
        1 mykkinhshf vknfhgaivi efvwvfliis ifikamifva enystmgkld risyslagii
       61 rertklyndd glltqtqaeq lkmladkmll ssgfspqdls ikietlhfmp edssnigera
      121 idntkslsfn vgpcepqkpl qelknlssfs nagrwiplyq vtlclsasth svtlsnfgwp
      181 tipikssait ier
//
LOCUS       WP_235897030              69 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Acinetobacter
            baumannii].
ACCESSION   WP_235897030
VERSION     WP_235897030.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..>69
                     /product="Ig-like domain-containing protein"
ORIGIN      
        1 nvgndtavvt idtvapnapv ldpinatdpv sgqaepgstv tvtypdgtta tvvagtdgsw
       61 svpnpgnlv
//
LOCUS       WP_235896990             225 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: phage antirepressor KilAC domain-containing protein
            [Yersinia].
ACCESSION   WP_235896990
VERSION     WP_235896990.1
KEYWORDS    RefSeq.
SOURCE      Yersinia
  ORGANISM  Yersinia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae.
REFERENCE   1  (residues 1 to 225)
  AUTHORS   Iyer,L.M., Koonin,E.V. and Aravind,L.
  TITLE     Extensive domain shuffling in transcription regulators of DNA
            viruses and implications for the origin of fungal APSES
            transcription factors
  JOURNAL   Genome Biol 3 (3), RESEARCH0012 (2002)
   PUBMED   11897024
REFERENCE   2  (residues 1 to 225)
  AUTHORS   Heinrich,J., Velleman,M. and Schuster,H.
  TITLE     The tripartite immunity system of phages P1 and P7
  JOURNAL   FEMS Microbiol Rev 17 (1-2), 121-126 (1995)
   PUBMED   7669337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015340.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03374.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Yersinia"
                     /db_xref="taxon:629"
     Protein         1..225
                     /product="phage antirepressor KilAC domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=24853
     Region          1..222
                     /region_name="KilAC"
                     /note="Phage antirepressor protein YoqD, KilAC domain
                     [Mobilome: prophages, transposons]; COG3645"
                     /db_xref="CDD:442862"
ORIGIN      
        1 mslstvvnpt mtsqeiadlv esrhdkvkqs ierlalrgti qlpplgevkn hlgqsvavyq
       61 vgkrdsyivv aqlspeftar lvdrwqelen qaripqnlpd alrlaadlae ekqklenqla
      121 iaapkaqfvd syvtatgslg fretckllhi kepafrkfll dseimyllag kltpyaqhid
      181 agrftvktge nltnghafiq nkftpkgiqw iagllaahqv kdiaa
//
LOCUS       WP_235896366             137 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial [Yersinia
            rochesterensis].
ACCESSION   WP_235896366
VERSION     WP_235896366.1
KEYWORDS    RefSeq.
SOURCE      Yersinia rochesterensis
  ORGANISM  Yersinia rochesterensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 137)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 137)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 137)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 137)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Yersinia rochesterensis"
                     /db_xref="taxon:1604335"
     Protein         <1..137
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <2..136
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            5..8
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213179"
     Site            60..69
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213179"
     Site            80..85
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213179"
     Site            88..91
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213179"
     Site            113..119
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213179"
ORIGIN      
        1 lligyifqsf nlishlsifd nvalplkyrg igkkerteqv nqilnlfdid nrknhkpmql
       61 sggqqqrvai aramvsnpal lladeptgnl dsknalsvlq qlkyinqkgt tiimvthsde
      121 assygnriin mrdgklt
//
LOCUS       WP_235897037             241 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class III-fold pyridoxal phosphate-dependent
            enzyme, partial [Acinetobacter baumannii].
ACCESSION   WP_235897037
VERSION     WP_235897037.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 241)
  AUTHORS   Shen,B.W., Hennig,M., Hohenester,E., Jansonius,J.N. and Schirmer,T.
  TITLE     Crystal structure of human recombinant ornithine aminotransferase
  JOURNAL   J Mol Biol 277 (1), 81-102 (1998)
   PUBMED   9514741
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012428.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00202.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..241
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
     Region          <1..237
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            83
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99735"
ORIGIN      
        1 yndleaakav ineqtcaviv epvqgeggvi padieflkgl relcdqfgal lifdevqtgv
       61 grtgalyaym nygvipdvlt takalgggfp vgamlttdkf aphfsvgthg ttyggnplas
      121 avagavfefi ntpevlegvk erhdyyknal nqlnekyevf kairgsglll gcvlkdefag
      181 kakdinnlag eegllsliag pnvvrftpsl iipfadideg lkrferalar fveiqkdeqa
      241 a
//
LOCUS       WP_235897038             153 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class III-fold pyridoxal phosphate-dependent
            enzyme, partial [Acinetobacter baumannii].
ACCESSION   WP_235897038
VERSION     WP_235897038.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Shen,B.W., Hennig,M., Hohenester,E., Jansonius,J.N. and Schirmer,T.
  TITLE     Crystal structure of human recombinant ornithine aminotransferase
  JOURNAL   J Mol Biol 277 (1), 81-102 (1998)
   PUBMED   9514741
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012428.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00202.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         1..>153
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
     Region          2..>153
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
ORIGIN      
        1 mnnfavsrgd fnewmvpvfa panfipvrge gsriwdqenk eyidfaggia vnalghahpv
       61 avnalteqak klwhvgngyt nepvlclakq ltentfadkv ffcnsgaean eaalklarkv
      121 gldsgvagks givafnnafh grtlftvsag gqp
//
LOCUS       WP_235897124             334 aa            linear   BCT 02-MAR-2025
DEFINITION  class I SAM-dependent methyltransferase [Hornefia
            butyriciproducens].
ACCESSION   WP_235897124
VERSION     WP_235897124.1
KEYWORDS    RefSeq.
SOURCE      Hornefia butyriciproducens
  ORGANISM  Hornefia butyriciproducens
            Bacteria; Bacillati; Bacillota; Clostridia; Peptostreptococcales;
            Anaerovoracaceae; Hornefia.
REFERENCE   1  (residues 1 to 334)
  AUTHORS   Conlin,C.A. and Miller,C.G.
  TITLE     opdA, a Salmonella enterica serovar Typhimurium gene encoding a
            protease, is part of an operon regulated by heat shock
  JOURNAL   J Bacteriol 182 (2), 518-521 (2000)
   PUBMED   10629202
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016340.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04445.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Hornefia butyriciproducens"
                     /db_xref="taxon:2652293"
     Protein         1..334
                     /product="class I SAM-dependent methyltransferase"
                     /EC_number="2.1.1.-"
                     /GO_function="GO:0008990 - rRNA
                     (guanine-N2-)-methyltransferase activity [Evidence IEA]"
                     /GO_process="GO:0031167 - rRNA methylation [Evidence IEA]"
                     /calculated_mol_wt=37585
     Region          <162..313
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(166..172,188..189,222..224,241)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
ORIGIN      
        1 mmkvngdnrd nrktcdkiic eeeryikeak tlaehlcvpl ewrspehnqt tenfrtpghd
       61 rseecgtper hrpaenggmv lrfgrqglcl evggqslrgd ftkllprlrp salrretlvr
      121 aarfrrtcgr yetcnetgdl dvsapgkpae gdcgrsmfpq ltavdatagl gedslllaam
      181 gfhvqlceyn pviaallrda lrraaeipel eeiagrmrli egdsrtllre lveppdlill
      241 dpmfperrkn slskkklqll qrleqpcede sgllraalda gprkivikrp vrgdflagcr
      301 pgysitgkli rydclvlpeh ermnrgecnh vehe
//
LOCUS       WP_235897130             500 aa            linear   BCT 02-MAR-2025
DEFINITION  polysaccharide deacetylase family protein [Hornefia
            butyriciproducens].
ACCESSION   WP_235897130
VERSION     WP_235897130.1
KEYWORDS    RefSeq.
SOURCE      Hornefia butyriciproducens
  ORGANISM  Hornefia butyriciproducens
            Bacteria; Bacillati; Bacillota; Clostridia; Peptostreptococcales;
            Anaerovoracaceae; Hornefia.
REFERENCE   1  (residues 1 to 500)
  AUTHORS   Freiberg,C., Fellay,R., Bairoch,A., Broughton,W.J., Rosenthal,A.
            and Perret,X.
  TITLE     Molecular basis of symbiosis between Rhizobium and legumes
  JOURNAL   Nature 387 (6631), 394-401 (1997)
   PUBMED   9163424
REFERENCE   2  (residues 1 to 500)
  AUTHORS   Mishra,C., Semino,C.E., McCreath,K.J., de la Vega,H., Jones,B.J.,
            Specht,C.A. and Robbins,P.W.
  TITLE     Cloning and expression of two chitin deacetylase genes of
            Saccharomyces cerevisiae
  JOURNAL   Yeast 13 (4), 327-336 (1997)
   PUBMED   9133736
REFERENCE   3  (residues 1 to 500)
  AUTHORS   Millward-Sadler,S.J., Poole,D.M., Henrissat,B., Hazlewood,G.P.,
            Clarke,J.H. and Gilbert,H.J.
  TITLE     Evidence for a general role for high-affinity non-catalytic
            cellulose binding domains in microbial plant cell wall hydrolases
  JOURNAL   Mol Microbiol 11 (2), 375-382 (1994)
   PUBMED   8170399
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013672.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01522.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Hornefia butyriciproducens"
                     /db_xref="taxon:2652293"
     Protein         1..500
                     /product="polysaccharide deacetylase family protein"
                     /GO_function="GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=57746
     Region          <95..>254
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          326..493
                     /region_name="CE4_SF"
                     /note="Catalytic NodB homology domain of the carbohydrate
                     esterase 4 superfamily; cl15692"
                     /db_xref="CDD:472828"
ORIGIN      
        1 mrteehigek irtrvgkkva svalaalmip glfsvvwaed tdpavlytav aasekssdtv
       61 rkeisqlsir efrggaakkk eivlkwkrnt eadaysiqry skrtglyrei avltaksgtl
      121 tcryvdrgvk kgryyryrir arknvdgnal ygqtsrsigv ylapdgskkn nvsrlttkkk
      181 syrlvtgatv kpvvtlktgr vgqkphkmtk swyssdesia avsakgrira kdqgecyiyc
      241 iahngkraki hvmvgvdpkq kirtvpiltf hrivpdkikk ryyadnqwva alsdfrkqir
      301 ylhdngfkti sadqfrkwyr gdielpqnsv mltmddgfye gyylvypvir eykmkmtsfl
      361 vgtrtqette pydgsakerf igwdkvrevr eeypqfefqa hswdlhhyen gkgavysrsy
      421 deltedlkkc tdagydyiay pygfapenyl qaarhsemkm afgfdrhvya rrsddpynir
      481 rlkvngfmtm kkfrklvrny
//
LOCUS       WP_235897175             199 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Hornefia
            butyriciproducens].
ACCESSION   WP_235897175
VERSION     WP_235897175.1
KEYWORDS    RefSeq.
SOURCE      Hornefia butyriciproducens
  ORGANISM  Hornefia butyriciproducens
            Bacteria; Bacillati; Bacillota; Clostridia; Peptostreptococcales;
            Anaerovoracaceae; Hornefia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024908.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13518.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Hornefia butyriciproducens"
                     /db_xref="taxon:2652293"
     Protein         1..199
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=23291
     Region          67..>167
                     /region_name="transpos_IS3"
                     /note="IS3 family transposase; NF033516"
                     /db_xref="CDD:468052"
ORIGIN      
        1 myseeqrtka lhvfheigsv tdtvrrfgyp srkhlytwir negktkekrk klklkntteh
       61 prnpsaefkl qvlrrcfeng esvksvseei gysrvsiymw rkrylqggva slmntknirp
      121 gklpdmdeki sseeveslrk qmyelqlevd ilketinvlk kdprvdwkdl knrekgavia
      181 eggnfamlli kykkkerva
//
LOCUS       WP_235897293             161 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: transposase [Erysipelotrichaceae].
ACCESSION   WP_235897293
VERSION     WP_235897293.1
KEYWORDS    RefSeq.
SOURCE      Erysipelotrichaceae
  ORGANISM  Erysipelotrichaceae
            Bacteria; Bacillati; Bacillota; Erysipelotrichia;
            Erysipelotrichales.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017416.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05598.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Erysipelotrichaceae"
                     /db_xref="taxon:128827"
     Protein         1..161
                     /product="transposase"
                     /calculated_mol_wt=18438
ORIGIN      
        1 mrilekswgh dfavyvfpai dsnafkvlys gngasrpavp anyiigalii kelfgftdde
       61 tvemvcfdvr aqyalhsvdl pdypisdrtf srkcnavdei mfvmerryha ddipvftkvh
      121 rskiffyfki etfnvvkilk fylrirgknk levatakkpp g
//
LOCUS       WP_235897406             153 aa            linear   BCT 02-MAR-2025
DEFINITION  toxin-activating lysine-acyltransferase [Yersinia alsatica].
ACCESSION   WP_235897406
VERSION     WP_235897406.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Trent,M.S., Worsham,L.M. and Ernst-Fonberg,M.L.
  TITLE     HlyC, the internal protein acyltransferase that activates hemolysin
            toxin: role of conserved histidine, serine, and cysteine residues
            in enzymatic activity as probed by chemical modification and
            site-directed mutagenesis
  JOURNAL   Biochemistry 38 (11), 3433-3439 (1999)
   PUBMED   10079090
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014813.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02794.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..153
                     /product="toxin-activating lysine-acyltransferase"
                     /GO_component="GO:0005737 - cytoplasm [Evidence IEA]"
                     /GO_function="GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009404 - toxin metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=17511
     Region          14..152
                     /region_name="HlyC"
                     /note="ACP:hemolysin acyltransferase (hemolysin-activating
                     protein) [Posttranslational modification, protein
                     turnover, chaperones]; COG2994"
                     /db_xref="CDD:442233"
ORIGIN      
        1 mdnknnstip lspeiqniig gvmlltrhsp lhllysvsew qqrivtslll nqfryyeakn
       61 gkpiafcnwa llsddnlaal isgerdinin dwqsgdnlff pemiapygha rliatdlrrn
      121 iflyrkgdia calrgriydk dcevkpkiqw fti
//
LOCUS       WP_235897412             167 aa            linear   BCT 02-MAR-2025
DEFINITION  ureidoglycolate lyase [Yersinia alsatica].
ACCESSION   WP_235897412
VERSION     WP_235897412.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 167)
  AUTHORS   Percudani,R., Carnevali,D. and Puggioni,V.
  TITLE     Ureidoglycolate hydrolase, amidohydrolase, lyase: how errors in
            biological databases are incorporated in scientific papers and vice
            versa
  JOURNAL   Database (Oxford) 2013, bat071 (2013)
   PUBMED   24107613
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 167)
  AUTHORS   Werner,A.K., Romeis,T. and Witte,C.P.
  TITLE     Ureide catabolism in Arabidopsis thaliana and Escherichia coli
  JOURNAL   Nat Chem Biol 6 (1), 19-21 (2010)
   PUBMED   19935661
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016040.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04115.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..167
                     /product="ureidoglycolate lyase"
                     /EC_number="4.3.2.3"
                     /GO_function="GO:0050385 - ureidoglycolate lyase activity
                     [Evidence IEA]"
                     /GO_process="GO:0000256 - allantoin catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=18574
     Region          2..153
                     /region_name="AllA"
                     /note="Ureidoglycolate hydrolase (allantoin degradation)
                     [Nucleotide transport and metabolism]; COG3194"
                     /db_xref="CDD:442427"
ORIGIN      
        1 mmtialhtip lieptaenla pfarwvgqpt tsptlargdi dcyhnicdan dfnehpvasy
       61 licyprpllm eqierhrlme eafiplkgds vmvlgapgel dpqklvavym dgsfglilyr
      121 dtwhfapfal gqpatymlls gkdsgpdiev vdlgpypisq peyqerk
//
LOCUS       WP_235897413             438 aa            linear   BCT 02-MAR-2025
DEFINITION  M10 family metallopeptidase C-terminal domain-containing protein
            [Yersinia alsatica].
ACCESSION   WP_235897413
VERSION     WP_235897413.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020137.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08548.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..438
                     /product="M10 family metallopeptidase C-terminal
                     domain-containing protein"
                     /GO_component="GO:0005615 - extracellular space [Evidence
                     IEA]"
                     /GO_function="GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=48064
     Region          35..421
                     /region_name="Zn_serralysin"
                     /note="serralysin family metalloprotease; NF035945"
                     /db_xref="CDD:468274"
ORIGIN      
        1 mateslrksp spiykknnii skhklkneei dtatsdatwr esnnndttil fysfnqsyll
       61 wstdiekqqg apifafnqeq irqsniamqs iadvanirfi qasqdssanl lflnydqrdt
      121 gdagyayypn qggfspiwin yvtqdiqnpt qvnfggyavi helghalglm hthshghtrq
      181 isvmsylseq nsgadyggny pstpqlldia alqnlygani strtgdttyg fnsnsnrpyf
      241 taekasdili ccvwdaggid tfnfsgygqn qninleelsf sdvggltgni siaagvcien
      301 aiggsgddni lgnsannria gglgadqlwg rggsntfvyy svsdslttsa dtihdfkank
      361 dsidlsalgl dknktrlvnk fsknsgteim qkydsvrnit hlmidfdnnq yesdmliqft
      421 gkhqlslnnf ifspqaia
//
LOCUS       WP_235897419             167 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Neoaquamicrobium microcysteis].
ACCESSION   WP_235897419
VERSION     WP_235897419.1
KEYWORDS    RefSeq.
SOURCE      Neoaquamicrobium microcysteis
  ORGANISM  Neoaquamicrobium microcysteis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Neoaquamicrobium.
REFERENCE   1  (residues 1 to 167)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Neoaquamicrobium microcysteis"
                     /db_xref="taxon:2682781"
     Protein         <1..>167
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          <1..>167
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 aadgpmpqtr ehillarqvg vpaivvflnk vdqvddpell elvelevrel lsmyefpgdd
       61 vpivpgsala aledsnreig enavrklmae vdayiptper pidqpflmpi edvfsisgrg
      121 tvvtgrverg ivkvgeevei vgiratsktt vtgvemfrkl ldqgqag
//
LOCUS       WP_235897426             461 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-dependent oxidoreductase [Neoaquamicrobium microcysteis].
ACCESSION   WP_235897426
VERSION     WP_235897426.1
KEYWORDS    RefSeq.
SOURCE      Neoaquamicrobium microcysteis
  ORGANISM  Neoaquamicrobium microcysteis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Neoaquamicrobium.
REFERENCE   1  (residues 1 to 461)
  AUTHORS   Dengler,U., Niefind,K., Kiess,M. and Schomburg,D.
  TITLE     Crystal structure of a ternary complex of D-2-hydroxyisocaproate
            dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate
            at 1.9 A resolution
  JOURNAL   J Mol Biol 267 (3), 640-660 (1997)
   PUBMED   9126843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02826.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Neoaquamicrobium microcysteis"
                     /db_xref="taxon:2682781"
     Protein         1..461
                     /product="NAD(P)-dependent oxidoreductase"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
                     /calculated_mol_wt=47778
     Region          42..354
                     /region_name="SerA"
                     /note="Phosphoglycerate dehydrogenase or related
                     dehydrogenase [Coenzyme transport and metabolism];
                     COG0111"
                     /db_xref="CDD:439881"
ORIGIN      
        1 mglrpgpdgr pdcsevrrhv eqagctfhdg daivaadigg ggihfvyrpd lntaedfvae
       61 agdglydavi aaatvvpadt vfpeggvrig agtgnmqsrs wgggsgagga aplmntpgin
      121 srataqmvmk ailrflpdlp fdllhertvs grfdtgrdlk dfptgklegr riavlgygni
      181 grevarlada fgmrpviyar erhrrwieae gfgyaatpve asagadivsv hlglgaadpp
      241 tgrfanaglv geaifdavsp gatlvnfdrg elvdagaldt amgdgrirfa aidadifsda
      301 atgavsgpla pylplverha grllllphav adtdhpsrva gakqavdqil eairfrrvgn
      361 lkgdlpdgyt avpgraihgi ggvsagalag vaedadvvkq layttgrlhd fwtrlaaaad
      421 aeerqalcaa mgdgvmldvn rqaalmgalg lhgpftgkpr d
//
LOCUS       WP_235897445             444 aa            linear   BCT 02-MAR-2025
DEFINITION  fimbrial protein [Yersinia alsatica].
ACCESSION   WP_235897445
VERSION     WP_235897445.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012635.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00419.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..444
                     /product="fimbrial protein"
                     /GO_component="GO:0009289 - pilus [Evidence IEA]"
                     /GO_process="GO:0007155 - cell adhesion [Evidence IEA]"
                     /calculated_mol_wt=47133
     Region          38..444
                     /region_name="Fimbrial"
                     /note="Fimbrial protein; cl01416"
                     /db_xref="CDD:445401"
ORIGIN      
        1 mnsithhsan lsprrpllwr glqlflslgl laialpsyaq cvwkganigg dnygaslqlg
       61 ninitsdyiq pvdsilassm islvparfws dpeaviyecd ladkdslfev fatngdsnvg
      121 gytnmgdnff qtffpftalk lihvdsgief triwqqvplr kydvagnkiq ikgkhfsqir
      181 aelkkvgsvd rtpgpatwgc pgpaadnysg sytcnqpngy vvfkgpgmpv petgydsatn
      241 yqtwgtgrym afgmntspvs iltrkntcvv rnvtpyvvfp iitvnelidn qtrsvnitvd
      301 iecqagaesg vnsgqtalgi qtslpgylka qglglvnsag gvsyllsdhy gtdsriatgv
      361 gislsdssgg amnfvgwggc vkdcastasa gwypvltgat gtgssaagfn nyshnftatl
      421 kklpngtpta gkvdatayvl vkiq
//
LOCUS       WP_235897472             120 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Neoaquamicrobium microcysteis].
ACCESSION   WP_235897472
VERSION     WP_235897472.1
KEYWORDS    RefSeq.
SOURCE      Neoaquamicrobium microcysteis
  ORGANISM  Neoaquamicrobium microcysteis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Neoaquamicrobium.
REFERENCE   1  (residues 1 to 120)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Neoaquamicrobium microcysteis"
                     /db_xref="taxon:2682781"
     Protein         1..120
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=13069
     Region          1..>105
                     /region_name="PRK13435"
                     /note="response regulator; Provisional"
                     /db_xref="CDD:184052"
ORIGIN      
        1 mrifylednp liamhveqlv edgghvfagt assfeelrer fdtlvmdcal vdidladght
       61 gpqavvwlke rgvpsifvtg qsqvaeeyrd vavgvvpkpi sesllseklr llasvvnnsd
//
LOCUS       WP_235897513             846 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Neoaquamicrobium microcysteis].
ACCESSION   WP_235897513
VERSION     WP_235897513.1
KEYWORDS    RefSeq.
SOURCE      Neoaquamicrobium microcysteis
  ORGANISM  Neoaquamicrobium microcysteis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Neoaquamicrobium.
REFERENCE   1  (residues 1 to 846)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Neoaquamicrobium microcysteis"
                     /db_xref="taxon:2682781"
     Protein         1..846
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=91379
     Region          <275..837
                     /region_name="PRK11107"
                     /note="hybrid sensory histidine kinase BarA; Provisional"
                     /db_xref="CDD:236848"
ORIGIN      
        1 msfavtraym rgrlmfimtg fllavglgag lihwqagear tsvkfgavlg amseatadvi
       61 yhalmldqvr lradlarera drtirdietg qfampkgpvv aqpvfdaaat tkvvqanlha
      121 aitrldhtyr afgeaagsdf pvetppqaga ddsltgdlag iladirgiav ppsllslwng
      181 egqtfslrqd vleiitlanr ldmfadlslp aaqrvftqiq miandrvrpn ldstmvelra
      241 dtikgydwle kilymvaavi fvvgvfttlw vfvpmmrnia hahddlqran asieaarvka
      301 esadraksef lanmsheirt pmngvlgmae llvrtdldnr qktfadvilk sgnalltiin
      361 dildfskida gqlsldpapf rlgeaiedva tlvstrvaek dlelivrvdp elpacvvgdv
      421 grirqivtnl vgngvkftek ghvlvdvsgh vengtshvtv rvedtgigip pemqtrvfek
      481 fsqvdasstr rhegtglgla iasrlvelmg gqmgltselg kgstfwftvp lpvfedmepa
      541 rpvpvdvsga rvlviddnkv nrdilleqlr swnfdcaaae ngevglafld rathlgarvd
      601 ciildyqmpg inglevarri aanpatwnip vllltsvdqa vtgkltmesg iaahlnkpar
      661 ssalletlvt mmqvaraapr resavrniap vpnfaqkaas aapkpvhpap ragtgrqldi
      721 lvaednevnq lvfsqildgl glsyriasng rtavemhrtl rprlmlmdvs mpemngleaa
      781 aairkaeegi gtrtpiigvt ahalkgdrek cieagmddyl skpvspnkla akinawigde
      841 avalia
//
LOCUS       WP_235897584             138 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-binding protein [Neoaquamicrobium microcysteis].
ACCESSION   WP_235897584
VERSION     WP_235897584.1
KEYWORDS    RefSeq.
SOURCE      Neoaquamicrobium microcysteis
  ORGANISM  Neoaquamicrobium microcysteis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Neoaquamicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13460.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Neoaquamicrobium microcysteis"
                     /db_xref="taxon:2682781"
     Protein         1..138
                     /product="NAD(P)H-binding protein"
                     /calculated_mol_wt=14851
     Region          1..>84
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mrqlkarggh divaisrtpe aaadadearp gdydrpetla aayegldrll viptsdlrpg
       61 rraiqnvaai daaveagvgh vvflteimel mvwakasnak ssieptsper rmhrrcaswm
      121 rilcavdgnt iiscsksp
//
LOCUS       WP_235897585             125 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase [Neoaquamicrobium microcysteis].
ACCESSION   WP_235897585
VERSION     WP_235897585.1
KEYWORDS    RefSeq.
SOURCE      Neoaquamicrobium microcysteis
  ORGANISM  Neoaquamicrobium microcysteis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Neoaquamicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017773.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05990.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Neoaquamicrobium microcysteis"
                     /db_xref="taxon:2682781"
     Protein         1..125
                     /product="alpha/beta hydrolase"
                     /calculated_mol_wt=13645
     Region          <24..>88
                     /region_name="COG4782"
                     /note="Esterase/lipase superfamily enzyme [General
                     function prediction only]"
                     /db_xref="CDD:443812"
ORIGIN      
        1 msglsevali hmaamnvdri dgldvgifvh gynynfqqsl frlaqmqads gidavpilfa
       61 wqseatitgy vsdrdsvtys rdylvellag lfgsrrhvsg rarmliqnpa dpfamsdlqa
      121 giacr
//
LOCUS       WP_235897646             123 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2231 domain-containing protein [Neoaquamicrobium microcysteis].
ACCESSION   WP_235897646
VERSION     WP_235897646.1
KEYWORDS    RefSeq.
SOURCE      Neoaquamicrobium microcysteis
  ORGANISM  Neoaquamicrobium microcysteis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Neoaquamicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021505.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09990.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Neoaquamicrobium microcysteis"
                     /db_xref="taxon:2682781"
     Protein         1..123
                     /product="DUF2231 domain-containing protein"
                     /calculated_mol_wt=13227
     Region          4..116
                     /region_name="DUF2231"
                     /note="Predicted membrane protein (DUF2231); cl01730"
                     /db_xref="CDD:470316"
ORIGIN      
        1 myrllsafpi aafslivltd laywqtanll wlhfsewllf agivfgvlaa lvrlveaavg
       61 wsrfspfyyv gglvvlvlaa innfihtedg itavmpyglt vsiltvlama atgllgrlgg
      121 rha
//
LOCUS       WP_235897696             319 aa            linear   BCT 02-MAR-2025
DEFINITION  type II secretion system F family protein [Neoaquamicrobium
            microcysteis].
ACCESSION   WP_235897696
VERSION     WP_235897696.1
KEYWORDS    RefSeq.
SOURCE      Neoaquamicrobium microcysteis
  ORGANISM  Neoaquamicrobium microcysteis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Neoaquamicrobium.
REFERENCE   1  (residues 1 to 319)
  AUTHORS   Peabody,C.R., Chung,Y.J., Yen,M.R., Vidal-Ingigliardi,D.,
            Pugsley,A.P. and Saier,M.H.
  TITLE     Type II protein secretion and its relationship to bacterial type IV
            pili and archaeal flagella
  JOURNAL   Microbiology (Reading) 149 (Pt 11), 3051-3072 (2003)
   PUBMED   14600218
REFERENCE   2  (residues 1 to 319)
  AUTHORS   Py,B., Loiseau,L. and Barras,F.
  TITLE     An inner membrane platform in the type II secretion machinery of
            Gram-negative bacteria
  JOURNAL   EMBO Rep 2 (3), 244-248 (2001)
   PUBMED   11266368
REFERENCE   3  (residues 1 to 319)
  AUTHORS   Stathopoulos,C., Hendrixson,D.R., Thanassi,D.G., Hultgren,S.J., St
            Geme,J.W. 3rd and Curtiss,R. 3rd.
  TITLE     Secretion of virulence determinants by the general secretory
            pathway in gram-negative pathogens: an evolving story
  JOURNAL   Microbes Infect 2 (9), 1061-1072 (2000)
   PUBMED   10967286
REFERENCE   4  (residues 1 to 319)
  AUTHORS   Salmond,G.P. and Reeves,P.J.
  TITLE     Membrane traffic wardens and protein secretion in gram-negative
            bacteria
  JOURNAL   Trends Biochem Sci 18 (1), 7-12 (1993)
   PUBMED   8438237
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11449670
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Neoaquamicrobium microcysteis"
                     /db_xref="taxon:2682781"
     Protein         1..319
                     /product="type II secretion system F family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /calculated_mol_wt=34138
     Region          126..316
                     /region_name="TadC"
                     /note="Flp pilus assembly protein TadC [Extracellular
                     structures]; COG2064"
                     /db_xref="CDD:441667"
ORIGIN      
        1 mggiaeligl sgpipmllpa aalllvaggv aafwpilaga sdrgevrrrl ragmdvaaer
       61 pkkergkrav rekaaksahd fyakadpenv arlrmrliqa gymdpgavgm fflirfasla
      121 gagiaafila qgsgaedtea nrwifvgvaa imgyfapsfv lsrkvkakmv eyrngfpdfm
      181 dlmivcsdag msmesgierv skelaatyps lsqnlqlvsi elragrsldg alksladrls
      241 ldevrsfatl lqqskelgts lsgalrvfsd emrhkrmsla eekahalpak msvpvtvcil
      301 pvvlmvaiip ivvklsamd
//
LOCUS       WP_235897746            1246 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidoglycan-binding protein [Neoaquamicrobium microcysteis].
ACCESSION   WP_235897746
VERSION     WP_235897746.1
KEYWORDS    RefSeq.
SOURCE      Neoaquamicrobium microcysteis
  ORGANISM  Neoaquamicrobium microcysteis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Neoaquamicrobium.
REFERENCE   1  (residues 1 to 1246)
  AUTHORS   Briers,Y., Volckaert,G., Cornelissen,A., Lagaert,S., Michiels,C.W.,
            Hertveldt,K. and Lavigne,R.
  TITLE     Muralytic activity and modular structure of the endolysins of
            Pseudomonas aeruginosa bacteriophages phiKZ and EL
  JOURNAL   Mol Microbiol 65 (5), 1334-1344 (2007)
   PUBMED   17697255
REFERENCE   2  (residues 1 to 1246)
  AUTHORS   Gooley,P.R., O'Connell,J.F., Marcy,A.I., Cuca,G.C., Salowe,S.P.,
            Bush,B.L., Hermes,J.D., Esser,C.K., Hagmann,W.K., Springer,J.P. et
            al.
  TITLE     The NMR structure of the inhibited catalytic domain of human
            stromelysin-1
  JOURNAL   Nat Struct Biol 1 (2), 111-118 (1994)
   PUBMED   7656014
REFERENCE   3  (residues 1 to 1246)
  AUTHORS   Foster,S.J.
  TITLE     Cloning, expression, sequence analysis and biochemical
            characterization of an autolytic amidase of Bacillus subtilis 168
            trpC2
  JOURNAL   J Gen Microbiol 137 (8), 1987-1998 (1991)
   PUBMED   1683402
REFERENCE   4  (residues 1 to 1246)
  AUTHORS   Dideberg,O., Charlier,P., Dive,G., Joris,B., Frere,J.M. and
            Ghuysen,J.M.
  TITLE     Structure of a Zn2+-containing D-alanyl-D-alanine-cleaving
            carboxypeptidase at 2.5 A resolution
  JOURNAL   Nature 299 (5882), 469-470 (1982)
   PUBMED   7121588
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013625.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01471.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1246
                     /organism="Neoaquamicrobium microcysteis"
                     /db_xref="taxon:2682781"
     Protein         1..1246
                     /product="peptidoglycan-binding protein"
                     /calculated_mol_wt=132955
     Region          33..>373
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          <248..>530
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          949..1131
                     /region_name="TPR"
                     /note="TPR repeat [General function prediction only];
                     COG0790"
                     /db_xref="CDD:440553"
     Region          1003..1032
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          1039..1068
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          1188..1244
                     /region_name="PGRP"
                     /note="Peptidoglycan-binding (PGRP) domain of
                     peptidoglycan hydrolases [Cell wall/membrane/envelope
                     biogenesis]; COG3409"
                     /db_xref="CDD:442635"
ORIGIN      
        1 msrtipaina atggsmnnrr syldsinagr rrrastslee isstldeles rirnpheerl
       61 tsrreqrlag dssyfgsrdn waharddrsp raggfdsdgv aqelsalrrd lrdqmgaglr
      121 refaalksei etamqtsgpa gqvaqlgvef erlsamihkl asqsddrqvn llrlemeqvk
      181 nalgklared tvqsldrrwd efdqrwtdia nqvsnvqrdp alqalsarle qigdavnalp
      241 tsvalrslee kmkllaatvd qfahhqdria pdaldaieer ldeisravaa stsvahpvaf
      301 dpepfqriea risgltrqme eaaqtnpaaa lvdqlsalsh rvedishrve lpehviekls
      361 dridsisykl dqapgrpdld evfhnlenrf aslsamleqr hddalvkgqn lfrdlerrld
      421 svaisiesgs gapsvqdarl meamearfad latrldrqpa apadeaaira learietmss
      481 kieasvlqpe vdkklirsle tqiadlaahl srpaepvaai edirprldki eeavaagkqd
      541 vleaarqaae eavrrfagsg sgpdgalvag laddlkslea ltrksddrna ktfeaihdtl
      601 lkivgrlgai engdtgpqkq aamqvretll gamqtpslqp saeampfagi ddnvipaade
      661 eltpkkgyrt aaaaaaeaaa davrsdaaga nasaaggrrs mlsgltrals grkgkkgsqs
      721 penlagdmpv epsmeaetps veldapldpv manqplepgt gapdlnaimk rvrdergepa
      781 rgkasvetak adfiaaarra aqaaaaeaei mkrspatktk sggfslggll ksrrkpvlmg
      841 vaailmalag lqigksfisg svsevakvpa papaafvaea vtiddakplp aqpvrvagea
      901 papstaraai aaaperaedv stnwldvett asapqasaaa aptqeteeaa esqtlpepte
      961 eqiaaipvea gpvalreaaa agdpkalfei gnryasgrgv ledmaaaaqw yeqaadegla
     1021 paqyrignly ekgigvqrdv aaaktwyqla aaqgnasamh nlavlfamga dgttdnesaa
     1081 rwfgeaaerg vkdsqfnlgi laakgvgmeq nleeayqwfa llakagdkda aekrdevata
     1141 lrpeqlenar aavelwrakp vdpeantvev pdswsegedv tasvdmkqav rniqqilnkn
     1201 gysagpadgv mgaktktaia sfqkdngmaa tgevdeplvh allerr
//
LOCUS       WP_235897844             325 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase [Yersinia alsatica].
ACCESSION   WP_235897844
VERSION     WP_235897844.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 325)
  AUTHORS   Keller,N.P., Dischinger,H.C. Jr., Bhatnagar,D., Cleveland,T.E. and
            Ullah,A.H.
  TITLE     Purification of a 40-kilodalton methyltransferase active in the
            aflatoxin biosynthetic pathway
  JOURNAL   Appl Environ Microbiol 59 (2), 479-484 (1993)
   PUBMED   8434913
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013087.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00891.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..325
                     /product="methyltransferase"
                     /GO_function="GO:0008171 - O-methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=36189
     Region          97..303
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(167..173,191..192,215..217,235)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
ORIGIN      
        1 mdqvmsytyq aalraaallg vadhlldkpk tvkelaqemg veeqplhrvm rllatrdvfk
       61 eiggqkfelt paaellskss phslraavlm ltdetfwrpl giiaesvhgh safkkifgts
      121 ffeywskpen htpdrdfhag mssmsnvena clvrsydfpk natvvdvagg mgglllrvlq
      181 anptlhgilf drepvvartr lgelgddsrw elqsgsffes cpsadiymlk yivhdwpdek
      241 sveilsncrk amrpdgkvli mdtiipennh phfgktmdil mlasfdggre rtetelkgll
      301 akadlkinri idtgtylsii eavar
//
LOCUS       WP_235897862             276 aa            linear   BCT 02-MAR-2025
DEFINITION  TraX family protein [Waltera intestinalis].
ACCESSION   WP_235897862
VERSION     WP_235897862.1
KEYWORDS    RefSeq.
SOURCE      Waltera intestinalis
  ORGANISM  Waltera intestinalis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Waltera.
REFERENCE   1  (residues 1 to 276)
  AUTHORS   Maneewannakul,K., Maneewannakul,S. and Ippen-Ihler,K.
  TITLE     Characterization of traX, the F plasmid locus required for
            acetylation of F-pilin subunits
  JOURNAL   J Bacteriol 177 (11), 2957-2964 (1995)
   PUBMED   7768788
REFERENCE   2  (residues 1 to 276)
  AUTHORS   Moore,D., Hamilton,C.M., Maneewannakul,K., Mintz,Y., Frost,L.S. and
            Ippen-Ihler,K.
  TITLE     The Escherichia coli K-12 F plasmid gene traX is required for
            acetylation of F pilin
  JOURNAL   J Bacteriol 175 (5), 1375-1383 (1993)
   PUBMED   8444800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017655.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05857.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Waltera intestinalis"
                     /db_xref="taxon:2606635"
     Protein         1..276
                     /product="TraX family protein"
                     /calculated_mol_wt=31029
     Region          18..264
                     /region_name="TraX"
                     /note="TraX protein; cl05434"
                     /db_xref="CDD:414418"
ORIGIN      
        1 mqtevmqegk iqgkrgissa vlkniavvtm lidhigavim trllirngly eamvnqeayt
       61 awmgqnggmy giymamriig rlafpiycfl lvegfqkthn vkkylgrmfl falisevpfd
      121 lafsgkawyp ayqnvfftll lgllviaglh lveqhfagtt vgktilrvgl naviiltgcv
      181 lalvlktdyd fkgilaitvl ylfrnrkkaq mwagviifll mdslemfaal sfiliwfyng
      241 trgrqnkyff yffypahlll lwlvcvamgi agipai
//
LOCUS       WP_235897872             163 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Waltera
            intestinalis].
ACCESSION   WP_235897872
VERSION     WP_235897872.1
KEYWORDS    RefSeq.
SOURCE      Waltera intestinalis
  ORGANISM  Waltera intestinalis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Waltera.
REFERENCE   1  (residues 1 to 163)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 163)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 163)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 163)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 163)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 163)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 163)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 163)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 163)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Waltera intestinalis"
                     /db_xref="taxon:2606635"
     Protein         1..163
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=18643
     Region          <2..>100
                     /region_name="LytT"
                     /note="DNA-binding response regulator, LytR/AlgR family
                     [Transcription, Signal transduction mechanisms]; COG3279"
                     /db_xref="CDD:442510"
     Region          <70..>100
                     /region_name="GGDEF"
                     /note="GGDEF domain, diguanylate cyclase (c-di-GMP
                     synthetase) or its enzymatically inactive variants [Signal
                     transduction mechanisms]; COG2199"
                     /db_xref="CDD:441801"
     Region          <76..>162
                     /region_name="Nucleotidyl_cyc_III"
                     /note="Class III nucleotidyl cyclases; cl11967"
                     /db_xref="CDD:448371"
ORIGIN      
        1 meirqydtsv kiiyltssae yavdsysvga yfyqlkpiwq esfyrlmdsv lsechkdken
       61 slmitktlte hedglhalmv ididnfksin dvyghtigee nqtpdqklqa fvwsssrnvt
      121 smlefalpef vhlkkvisve eirenmgekt gedilglfvd vse
//
LOCUS       WP_235897926             204 aa            linear   BCT 02-MAR-2025
DEFINITION  ECF transporter S component [Waltera intestinalis].
ACCESSION   WP_235897926
VERSION     WP_235897926.1
KEYWORDS    RefSeq.
SOURCE      Waltera intestinalis
  ORGANISM  Waltera intestinalis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Waltera.
REFERENCE   1  (residues 1 to 204)
  AUTHORS   Iyer,L.M., Zhang,D., Rogozin,I.B. and Aravind,L.
  TITLE     Evolution of the deaminase fold and multiple origins of eukaryotic
            editing and mutagenic nucleic acid deaminases from bacterial toxin
            systems
  JOURNAL   Nucleic Acids Res 39 (22), 9473-9497 (2011)
   PUBMED   21890906
REFERENCE   2  (residues 1 to 204)
  AUTHORS   Rodionov,D.A., Hebbeln,P., Eudes,A., ter Beek,J., Rodionova,I.A.,
            Erkens,G.B., Slotboom,D.J., Gelfand,M.S., Osterman,A.L.,
            Hanson,A.D. and Eitinger,T.
  TITLE     A novel class of modular transporters for vitamins in prokaryotes
  JOURNAL   J Bacteriol 191 (1), 42-51 (2009)
   PUBMED   18931129
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024231.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12822.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Waltera intestinalis"
                     /db_xref="taxon:2606635"
     Protein         1..204
                     /product="ECF transporter S component"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /calculated_mol_wt=21680
     Region          2..192
                     /region_name="COG4684"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:443720"
ORIGIN      
        1 mkknktlemv qlavliaiml ilaftplgyl rigplaislm tipvvigaml lgptggavlg
       61 lvfgltsfyq cfagdpfgaa lvamnpfftf lvciptrtlm gwlsgvifka lwkidktktv
      121 tyfvtgllga fmntlffmst lmicfghtey lqsmnatgan lfmfavafcg ingalempms
      181 cvvgggvaka vsvalkknat teek
//
LOCUS       WP_235897988              66 aa            linear   BCT 02-MAR-2025
DEFINITION  DapH/DapD/GlmU-related protein [Heminiphilus faecis].
ACCESSION   WP_235897988
VERSION     WP_235897988.1
KEYWORDS    RefSeq.
SOURCE      Heminiphilus faecis
  ORGANISM  Heminiphilus faecis
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Muribaculaceae; Heminiphilus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025953.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14602.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Heminiphilus faecis"
                     /db_xref="taxon:2601703"
     Protein         1..66
                     /product="DapH/DapD/GlmU-related protein"
                     /calculated_mol_wt=6654
     Region          <15..66
                     /region_name="CysE"
                     /note="Serine acetyltransferase [Amino acid transport and
                     metabolism]; COG1045"
                     /db_xref="CDD:440667"
ORIGIN      
        1 mhcvsagycy agggkigdnv llgagskvlp svnignnvkv gancvvvedv fdnatvvlpk
       61 priinr
//
LOCUS       WP_235897999             391 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Heminiphilus faecis].
ACCESSION   WP_235897999
VERSION     WP_235897999.1
KEYWORDS    RefSeq.
SOURCE      Heminiphilus faecis
  ORGANISM  Heminiphilus faecis
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Muribaculaceae; Heminiphilus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Heminiphilus faecis"
                     /db_xref="taxon:2601703"
     Protein         1..391
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=44526
     Region          7..383
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mnrtdnkiyg lfndsfppvl dgvtltvqny vhwlsimgyr tcvvtpwnpv tpshegfdly
       61 ryfslsiasr kpyrygypkv dpfiwhkmrt vpfalvhshc pfssgrlaly aarkqrvplv
      121 atfhskyrtd lehslpswmv srimkrvmnf fnsadevwip qarvedtvre ygykgrltvv
      181 engidlemen fdaildfkhg srerlgvapg emmllfvgqh irekgvelii qamdrlrdlp
      241 vrmsfigtgy avddmnrlik rfglegrvtl hgvisdrell kcyyaaadlf lfpsmydnap
      301 lvvreaammg tpsvilkgst asevivdgvn gfladqtpds yadtvrrlyk apesvtaaak
      361 gasssltrsw revmdevvlr ykeiierygr s
//
LOCUS       WP_235898017              53 aa            linear   BCT 02-MAR-2025
DEFINITION  phage integrase N-terminal SAM-like domain-containing protein
            [Waltera intestinalis].
ACCESSION   WP_235898017
VERSION     WP_235898017.1
KEYWORDS    RefSeq.
SOURCE      Waltera intestinalis
  ORGANISM  Waltera intestinalis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Waltera.
REFERENCE   1  (residues 1 to 53)
  AUTHORS   Subramanya,H.S., Arciszewska,L.K., Baker,R.A., Bird,L.E.,
            Sherratt,D.J. and Wigley,D.B.
  TITLE     Crystal structure of the site-specific recombinase, XerD
  JOURNAL   EMBO J 16 (17), 5178-5187 (1997)
   PUBMED   9311978
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024886.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13495.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..53
                     /organism="Waltera intestinalis"
                     /db_xref="taxon:2606635"
     Protein         1..53
                     /product="phage integrase N-terminal SAM-like
                     domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=5871
     Region          9..>40
                     /region_name="Phage_int_SAM_4"
                     /note="Phage integrase, N-terminal SAM-like domain;
                     pfam13495"
                     /db_xref="CDD:463898"
ORIGIN      
        1 mnkiedvgkl rnlkpgtirt yknnvrgflk finkhpedlt cegagdllpv lfs
//
LOCUS       WP_235898041             260 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerophosphodiester phosphodiesterase family protein
            [Heminiphilus faecis].
ACCESSION   WP_235898041
VERSION     WP_235898041.1
KEYWORDS    RefSeq.
SOURCE      Heminiphilus faecis
  ORGANISM  Heminiphilus faecis
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Muribaculaceae; Heminiphilus.
REFERENCE   1  (residues 1 to 260)
  AUTHORS   Kim,H. and Farrand,S.K.
  TITLE     Characterization of the acc operon from the nopaline-type Ti
            plasmid pTiC58, which encodes utilization of agrocinopines A and B
            and susceptibility to agrocin 84
  JOURNAL   J Bacteriol 179 (23), 7559-7572 (1997)
   PUBMED   9393724
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03009.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Heminiphilus faecis"
                     /db_xref="taxon:2601703"
     Protein         1..260
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /GO_function="GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=28450
     Region          25..246
                     /region_name="PI-PLCc_GDPD_SF"
                     /note="Catalytic domain of phosphoinositide-specific
                     phospholipase C-like phosphodiesterases superfamily;
                     cl14615"
                     /db_xref="CDD:472694"
     Site            order(28,57,59,120,155,220)
                     /site_type="active"
                     /db_xref="CDD:176498"
     Site            order(28,72)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176498"
ORIGIN      
        1 mvkhlflgla macvalsata akpeviahrg ywktdgsaqn siralvkads ihcfasefdv
       61 wmtadsvlvv nhdadvngvh ietssskkvl aqklangenv ptleaylaka sklntrivce
      121 lkthdsrsme raaakailal vkkyglgdkv dyivfskdaf tyfvkhapkg tgvyylngdy
      181 ipsqvkamgg agidysikvm kkhpewiaqc hdlgllvnvw tvnapedmkw cidrgvdfit
      241 tnepellqkm lkgcdgeckk
//
LOCUS       WP_235898057             109 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6050 family protein [Lachnospiraceae].
ACCESSION   WP_235898057
VERSION     WP_235898057.1
KEYWORDS    RefSeq.
SOURCE      Lachnospiraceae
  ORGANISM  Lachnospiraceae
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039334.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19517.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Lachnospiraceae"
                     /db_xref="taxon:186803"
     Protein         1..109
                     /product="DUF6050 family protein"
                     /calculated_mol_wt=11994
     Region          2..>62
                     /region_name="DUF6050"
                     /note="Family of unknown function (DUF6050); pfam19517"
                     /db_xref="CDD:437349"
ORIGIN      
        1 mkkalfkiii pvcvlvlwmi tcypvcnkad gfdyflywil vgcpygirkm cmflvpknfg
       61 iagsmgilal ncivggligg iivlvriivi fteiikvlag hlwtqcpkv
//
LOCUS       WP_235898182             580 aa            linear   BCT 02-MAR-2025
DEFINITION  cobalamin-dependent protein [Mogibacterium kristiansenii].
ACCESSION   WP_235898182
VERSION     WP_235898182.1
KEYWORDS    RefSeq.
SOURCE      Mogibacterium kristiansenii
  ORGANISM  Mogibacterium kristiansenii
            Bacteria; Bacillati; Bacillota; Clostridia; Peptostreptococcales;
            Anaerovoracaceae; Mogibacterium.
REFERENCE   1  (residues 1 to 580)
  AUTHORS   Perez-Marin,M.C., Padmanabhan,S., Polanco,M.C., Murillo,F.J. and
            Elias-Arnanz,M.
  TITLE     Vitamin B12 partners the CarH repressor to downregulate a
            photoinducible promoter in Myxococcus xanthus
  JOURNAL   Mol Microbiol 67 (4), 804-819 (2008)
   PUBMED   18315685
REFERENCE   2  (residues 1 to 580)
  AUTHORS   Cervantes,M. and Murillo,F.J.
  TITLE     Role for vitamin B(12) in light induction of gene expression in the
            bacterium Myxococcus xanthus
  JOURNAL   J Bacteriol 184 (8), 2215-2224 (2002)
   PUBMED   11914353
REFERENCE   3  (residues 1 to 580)
  AUTHORS   Tollinger,M., Konrat,R., Hilbert,B.H., Marsh,E.N. and Krautler,B.
  TITLE     How a protein prepares for B12 binding: structure and dynamics of
            the B12-binding subunit of glutamate mutase from Clostridium
            tetanomorphum
  JOURNAL   Structure 6 (8), 1021-1033 (1998)
   PUBMED   9739092
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014375.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02310.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Mogibacterium kristiansenii"
                     /db_xref="taxon:2606708"
     Protein         1..580
                     /product="cobalamin-dependent protein"
                     /GO_function="GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /note="Presence of a B(12) (cobalamin)-binding domain
                     implies dependence on cobalamin itself, in one of its
                     several forms, or in some unusual lineages, dependence on
                     a cobalamin-like analog.; Presence of a B(12)
                     (cobalamin)-binding domain implies dependence on cobalamin
                     itself, in one of its several forms, or in some unusual
                     lineages, dependence on a cobalamin-like analog.; Presence
                     of a B(12) (cobalamin)-binding domain implies dependence
                     on cobalamin itself, in one of its several forms, or in
                     some unusual lineages, dependence on a cobalamin-like
                     analog.; Presence of a B(12) (cobalamin)-binding domain
                     implies dependence on cobalamin itself, in one of its
                     several forms, or in some unusual lineages, dependence on
                     a cobalamin-like analog.; Presence of a B(12)
                     (cobalamin)-binding domain implies dependence on cobalamin
                     itself, in one of its several forms, or in some unusual
                     lineages, dependence on a cobalamin-like analog.; Presence
                     of a B(12) (cobalamin)-binding domain implies dependence
                     on cobalamin itself, in one of its several forms, or in
                     some unusual lineages, dependence on a cobalamin-like
                     analog."
                     /calculated_mol_wt=65252
     Region          8..328
                     /region_name="URO-D_CIMS_like"
                     /note="The URO-D_CIMS_like protein superfamily includes
                     bacterial and eukaryotic uroporphyrinogen decarboxylases
                     (URO-D), coenzyme M methyltransferases and other putative
                     bacterial methyltransferases, as well as cobalamine (B12)
                     independent methionine synthases; cl00464"
                     /db_xref="CDD:469779"
     Region          371..561
                     /region_name="corrinoid_protein_B12-BD"
                     /note="B12 binding domain of corrinoid proteins. A family
                     of small methanogenic corrinoid proteins that bind
                     methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a
                     cofactor. They play a role on the methanogenesis from
                     trimethylamine, dimethylamine or...; cd02070"
                     /db_xref="CDD:239021"
     Site            order(462..468,471,508..510,512..514,543,559)
                     /site_type="other"
                     /note="B12 binding site [chemical binding]"
                     /db_xref="CDD:239021"
     Site            465
                     /site_type="other"
                     /note="cobalt ligand [ion binding]"
                     /db_xref="CDD:239021"
ORIGIN      
        1 mtpkeiflel lkkegrperl ldqyealqma lgdpvsrylr agqvrgsrti drwgvtilfp
       61 edapgtipyh seeatvlkdi trwkeevhap diksncqegw eefrkiqrek agnqrllagf
      121 mgtgifeqch flmgfedtlt nfyehpkemh elidyilsyr leyvrmlikg lqpdvifshd
      181 dwgaknqlfm kpeiwreffk epyrkfygei rdagciaihh sdsylvpild dmveigiqcw
      241 qgilpennip evvrhldgrm ivmggvgaei drsdateeei reymrkmlkq ngslehfips
      301 ityglsgtif khvdpiidee iarynnelhf rhynypvtgk kyalstdknk sashgeqkvs
      361 dsvrksplgk vadvlmkgnr nrmekvcrea ldagyapqei lnkglitgmt evgnafsrge
      421 vfvpemlmsa kcmttaldll kpmlvadasa slgrvcigtv qgdmhdigkn lvkimlegng
      481 fdvidlgsdv paetfvrtak eekcdiiccs alltttieem rkvvegckaa giredvtimv
      541 ggapvtqdfc dsigadiytd dataaakaav qamenrqrpa
//
LOCUS       WP_235898230             158 aa            linear   BCT 02-MAR-2025
DEFINITION  lactococcin 972 family bacteriocin [Mogibacterium kristiansenii].
ACCESSION   WP_235898230
VERSION     WP_235898230.1
KEYWORDS    RefSeq.
SOURCE      Mogibacterium kristiansenii
  ORGANISM  Mogibacterium kristiansenii
            Bacteria; Bacillati; Bacillota; Clostridia; Peptostreptococcales;
            Anaerovoracaceae; Mogibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021219.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09683.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Mogibacterium kristiansenii"
                     /db_xref="taxon:2606708"
     Protein         1..158
                     /product="lactococcin 972 family bacteriocin"
                     /calculated_mol_wt=17208
     Region          94..154
                     /region_name="Lactococcin_972"
                     /note="Bacteriocin (Lactococcin_972); cl09891"
                     /db_xref="CDD:447849"
ORIGIN      
        1 mfkkiitvtm vsvlmlmasv gvfadapqdv sssdvppqdm lydpelgyev dldnpasdtl
       61 gctyveglgy kvtidsenla regsydsgwk dfyggkwrhg vnskhvwsky nhskkthktt
      121 vkgaggkysy sgwvgkgkqa aaswekaktg nkawadvk
//
LOCUS       WP_235898233             253 aa            linear   BCT 02-MAR-2025
DEFINITION  class I SAM-dependent methyltransferase [Mogibacterium
            kristiansenii].
ACCESSION   WP_235898233
VERSION     WP_235898233.1
KEYWORDS    RefSeq.
SOURCE      Mogibacterium kristiansenii
  ORGANISM  Mogibacterium kristiansenii
            Bacteria; Bacillati; Bacillota; Clostridia; Peptostreptococcales;
            Anaerovoracaceae; Mogibacterium.
REFERENCE   1  (residues 1 to 253)
  AUTHORS   Conlin,C.A. and Miller,C.G.
  TITLE     opdA, a Salmonella enterica serovar Typhimurium gene encoding a
            protease, is part of an operon regulated by heat shock
  JOURNAL   J Bacteriol 182 (2), 518-521 (2000)
   PUBMED   10629202
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016340.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04445.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Mogibacterium kristiansenii"
                     /db_xref="taxon:2606708"
     Protein         1..253
                     /product="class I SAM-dependent methyltransferase"
                     /EC_number="2.1.1.-"
                     /GO_function="GO:0008990 - rRNA
                     (guanine-N2-)-methyltransferase activity [Evidence IEA]"
                     /GO_process="GO:0031167 - rRNA methylation [Evidence IEA]"
                     /calculated_mol_wt=27960
     Region          18..246
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
ORIGIN      
        1 mnltlfipsk eytaagerwa emlrlpvvtd aaelspdrlh lqtdegglsl vqgklsvrgd
       61 fthmiprlrp snlnreflvk agrmkgierp vaidataglg edslllaaag frvhlfeynp
      121 viaallldam erarevpelr epvsrmelhv gdsieamnra edsiggipdl vlldpmfper
      181 qksalvkkkf qlihrlespc meeetllnaa iaagprkili krplkgpwla grkpgysisg
      241 kavrydcill prd
//
LOCUS       WP_235898104             663 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-glucuronidase family glycosyl hydrolase [Heminiphilus
            faecis].
ACCESSION   WP_235898104
VERSION     WP_235898104.1
KEYWORDS    RefSeq.
SOURCE      Heminiphilus faecis
  ORGANISM  Heminiphilus faecis
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Muribaculaceae; Heminiphilus.
REFERENCE   1  (residues 1 to 663)
  AUTHORS   Nurizzo,D., Nagy,T., Gilbert,H.J. and Davies,G.J.
  TITLE     The structural basis for catalysis and specificity of the
            Pseudomonas cellulosa alpha-glucuronidase, GlcA67A
  JOURNAL   Structure 10 (4), 547-556 (2002)
   PUBMED   11937059
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03648.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Heminiphilus faecis"
                     /db_xref="taxon:2601703"
     Protein         1..663
                     /product="alpha-glucuronidase family glycosyl hydrolase"
                     /GO_function="GO:0046559 - alpha-glucuronidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0045493 - xylan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=74502
     Region          1..634
                     /region_name="AguA2"
                     /note="Alpha-glucuronidase [Carbohydrate transport and
                     metabolism]; COG3661"
                     /db_xref="CDD:442878"
ORIGIN      
        1 mltcmsakas vydgsrlwlp qpvennaavi kapksssati nvataelrss wtgapvemkl
       61 ikdkslgrdg fiitpgkdkv tltansapgl lygayrllam qtagkslpne irevpsydlr
      121 ilnhwdnldr tiergysgss iwvwdelpat isprykeyar anaavgingv vlnnvnasss
      181 ilsagylhkv kaiadifrpy gikvylsanf aapmqldslp tadpldrqvi kwwkdkasei
      241 yrlipdfggf lvkansegqp gpcdfdrsha qganmmaral kphggivmwr afvyspadad
      301 rakqayiefq pldgqfddnv ivqikngpvd fqprepyspl fgampstdcm vefqitqeyl
      361 ghsnhlayla pmwkeffsyv npksikavag vanvgddtnw tghpfaqanw yafgrlawnp
      421 altgediade wlsqtifngc nvpaeitaev idimmrsrea vvdymmpmgl hhlfafghhy
      481 gpepwcaieg grpdwmpsyy hradsagigf drsskgsnai gqypdnlakr ldnpalcpee
      541 fllwfhhlpw eyqlpsgdtl wdslcrhyer gvvetrdfqr rwehvqpyvd palfddiqrr
      601 lktqvrdaiw wkdgcllyfq elsrlpfpdd itppvhnldd lkkvnlgisn fecptadlln
      661 rqr
//
LOCUS       WP_235898266             247 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6048 family protein [Winogradskyella ouciana].
ACCESSION   WP_235898266
VERSION     WP_235898266.1
KEYWORDS    RefSeq.
SOURCE      Winogradskyella ouciana
  ORGANISM  Winogradskyella ouciana
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Winogradskyella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039966.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19515.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Winogradskyella ouciana"
                     /db_xref="taxon:2608631"
     Protein         1..247
                     /product="DUF6048 family protein"
                     /calculated_mol_wt=28214
     Region          1..236
                     /region_name="DUF6048"
                     /note="Domain of unknown function (DUF6048); pfam19515"
                     /db_xref="CDD:437347"
ORIGIN      
        1 myasyiksma illlfstiaf aqeekktvtd tlvykqkygl rlgadisklg rtffddnytg
       61 feimgdyrlt kkiylageig neertienev lnnttkgsyf kggidlnfyk nwldmenmiy
      121 vgfragastf sqtlnsyrvy dvnhqywndd lfsveegsef ngltaiwaei qigikaemfn
      181 nfyaginvql kglvtetapd nlenlyipgf nrtydsgrfg vgfgfnlsyl vpifkkdkiv
      241 iqekeee
//
LOCUS       WP_235898285             244 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Winogradskyella ouciana].
ACCESSION   WP_235898285
VERSION     WP_235898285.1
KEYWORDS    RefSeq.
SOURCE      Winogradskyella ouciana
  ORGANISM  Winogradskyella ouciana
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Winogradskyella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024572.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13174.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Winogradskyella ouciana"
                     /db_xref="taxon:2608631"
     Protein         1..244
                     /product="tetratricopeptide repeat protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=27474
     Region          1..>131
                     /region_name="RsiW"
                     /note="Transmembrane transcriptional regulator RsiW
                     (anti-sigma-W factor) [Transcription]; COG5662"
                     /db_xref="CDD:444381"
     Region          132..>230
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Site            order(139..140,143..144,146,170,173..174,177..178,
                     180..181,204,209..210,213..214,217)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          139..163
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          168..198
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          203..230
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mnlndisqee fesieaylng qlsdedvmvf enrlkneegf askvedikti ltgletqvmk
       61 eqldefhdem pnsqedittn epkvkslhwk riavaavlii glgsfwlfng nsndrlysny
      121 ftpdpglptt msstdnyefy eamvdykqgd yntagqkwkv lleakpksdt lnyfigsalm
      181 andkineain hlktvtesnd gafkneayyy lglaylksgn tdaaisalkk tnvpkskdll
      241 kkld
//
LOCUS       WP_235898317             679 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Haemophilus seminalis].
ACCESSION   WP_235898317
VERSION     WP_235898317.1
KEYWORDS    RefSeq.
SOURCE      Haemophilus seminalis
  ORGANISM  Haemophilus seminalis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (residues 1 to 679)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 679)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Haemophilus seminalis"
                     /db_xref="taxon:2582921"
     Protein         1..679
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=77320
     Region          4..209
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
     Site            order(8,10,39,94,96)
                     /site_type="active"
                     /db_xref="CDD:133038"
     Region          278..675
                     /region_name="WecE"
                     /note="dTDP-4-amino-4,6-dideoxygalactose transaminase
                     [Cell wall/membrane/envelope biogenesis]; COG0399"
                     /db_xref="CDD:440168"
ORIGIN      
        1 mslsilmsiy hkenpeyfnq tmesiwfkqt lkpneivlve dgkltrelys ainswkdklg
       61 dklvsiplaq nvglasalne glkvakgnfi armdtddiae serfkkqfef lqqnsdidav
      121 gcwiseiden sniinnkvey pllhnelyqf fekrdpiahp tamfrktffd kagryskeva
      181 laedtllwyq aflnncrlan vdyiglkfrr ssdfykrran wkktigllkf rlfhinrdln
      241 ygikadiyai ayflmsisps fvkkycinyf gkkvnymkil fsppfvnedv inevvdslrs
      301 gwittgpkvk aleeeikqfs gakevlcvns wtsaaimilr wfgvkegdev ivpaytysat
      361 alavlhagak pvmvdtsedf nisldaikka itprtkaimp vdiagfpcdy deimdlvkss
      421 eirplfkaes enqeklgril vlndaahslg awykkgmrtg setdiaifsl havknittae
      481 ggaicinlpa pfdnaklyge lrqmalncqt kdafskskag gwryditglg mkinmadvna
      541 aiglaqiriy edllkerkrv fdtygeafkq ydwailppsk qgeketsyhl yalrikdfte
      601 aqrdamidei aksevavnvh fipmpmltlf knlgykiedy pqaynnykce islpiypqlt
      661 deqvkfvidt vvnvynkvk
//
LOCUS       WP_235898331             102 aa            linear   BCT 02-MAR-2025
DEFINITION  type II toxin-antitoxin system PemK/MazF family toxin [Haemophilus
            haemolyticus].
ACCESSION   WP_235898331
VERSION     WP_235898331.1
KEYWORDS    RefSeq.
SOURCE      Haemophilus haemolyticus
  ORGANISM  Haemophilus haemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (residues 1 to 102)
  AUTHORS   Yamaguchi,Y. and Inouye,M.
  TITLE     Regulation of growth and death in Escherichia coli by
            toxin-antitoxin systems
  JOURNAL   Nat Rev Microbiol 9 (11), 779-790 (2011)
   PUBMED   21927020
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 102)
  AUTHORS   Yamaguchi,Y., Park,J.H. and Inouye,M.
  TITLE     Toxin-antitoxin systems in bacteria and archaea
  JOURNAL   Annu Rev Genet 45, 61-79 (2011)
   PUBMED   22060041
REFERENCE   3  (residues 1 to 102)
  AUTHORS   Masuda,Y., Miyakawa,K., Nishimura,Y. and Ohtsubo,E.
  TITLE     chpA and chpB, Escherichia coli chromosomal homologs of the pem
            locus responsible for stable maintenance of plasmid R100
  JOURNAL   J Bacteriol 175 (21), 6850-6856 (1993)
   PUBMED   8226627
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014505.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02452.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Haemophilus haemolyticus"
                     /db_xref="taxon:726"
     Protein         1..102
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=11694
     Region          1..101
                     /region_name="YifN"
                     /note="Uncharacterized conserved protein YifN, PemK
                     superfamily [Function unknown]; COG3692"
                     /db_xref="CDD:442907"
ORIGIN      
        1 mtkvrpvvvi arhkrnrelv tviplsttep nplenyhyal pvnplpdkan iqcwakcdmv
       61 ytvslsrldr ykidkrtyiv pvvcdedfql iknctaialk lr
//
LOCUS       WP_235898361             938 aa            linear   BCT 02-MAR-2025
DEFINITION  YadA-like family protein [Haemophilus seminalis].
ACCESSION   WP_235898361
VERSION     WP_235898361.1
KEYWORDS    RefSeq.
SOURCE      Haemophilus seminalis
  ORGANISM  Haemophilus seminalis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (residues 1 to 938)
  AUTHORS   Sandt,C.H. and Hill,C.W.
  TITLE     Nonimmune binding of human immunoglobulin A (IgA) and IgG Fc by
            distinct sequence segments of the EibF cell surface protein of
            Escherichia coli
  JOURNAL   Infect Immun 69 (12), 7293-7303 (2001)
   PUBMED   11705900
REFERENCE   2  (residues 1 to 938)
  AUTHORS   Hoiczyk,E., Roggenkamp,A., Reichenbecher,M., Lupas,A. and
            Heesemann,J.
  TITLE     Structure and sequence analysis of Yersinia YadA and Moraxella
            UspAs reveal a novel class of adhesins
  JOURNAL   EMBO J 19 (22), 5989-5999 (2000)
   PUBMED   11080146
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015831.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03895.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..938
                     /organism="Haemophilus seminalis"
                     /db_xref="taxon:2582921"
     Protein         1..938
                     /product="YadA-like family protein"
                     /calculated_mol_wt=97245
     Region          114..167
                     /region_name="Trp_ring"
                     /note="Trimeric autotransporter adhesin Trp ring domain;
                     pfam18669"
                     /db_xref="CDD:436655"
     Region          196..936
                     /region_name="Hia"
                     /note="Autotransporter adhesin [Intracellular trafficking,
                     secretion, and vesicular transport, Extracellular
                     structures]; COG5295"
                     /db_xref="CDD:444098"
ORIGIN      
        1 mkagntvtfk agkniklkqd gknftyslnp vltdmtsigg ngttmtfnpq gvdlgnkkit
       61 gvksaldttp vtttpgtpvt dqpnlvnlgt kpgekalpnn vlnsaatvrd lanmgwivss
      121 nkttdalgea ykdtvknane vkfigtgaat vsgktvdgir titvdvkqpe pqtetltstg
      181 gkvtnpkddn akklvtagnv adminksgfn lktsadknsn gekakgtkda gelinpgatv
      241 emvagknmsv kqdadgkvty atkedvefnt vkvgnnkdgk spvefkteaa kpatnnaaek
      301 qpttalnvts sdgkptqitg vasslntkpv etapngkdga kpesnlvdla nattpnaaat
      361 vgdlqnmgwi vgapengyvd tvknankvdf kagagisvig dtkdgvreit igikdgevvk
      421 pnedpsspnt gagyvtgnkv ataiqksgfv igkqtaalas edfknedekv npddqvrfad
      481 gnntkvklat kesvnndgtk vttttvkvdv tglpvqytdk kgkpvtkvgd kyftvddkgn
      541 ptttevkpad lttnmvnpaa apneigaptt lgnvksnlpe tkngnnptln qaaptaedad
      601 kvknnaatvs dmlnagwnlq nngdakdfvk pydtvnfvdg kgtkvsvete ngttsnvkfd
      661 idtgkitnks dgsvqgpvtp emqrvlkdak daynslppna peavrkvakq avedaennia
      721 nvenkvataq dvanainnsg ftlttsengg kkisgtpemi npgkkvemva gknmtvkqes
      781 ngkvtyatas nvtfdsvqfg dngpkitnng gninvgtatg aptkitgvap geisatskda
      841 vngsqlyamg nklqgqinkl gnrmnagmat saamanllqp hkpgqsvata gvgqhknqsa
      901 vavgysrisd ngkygvhfsm gantqgevtg gaavgyfw
//
LOCUS       WP_235898377             180 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2652 domain-containing protein [Winogradskyella ouciana].
ACCESSION   WP_235898377
VERSION     WP_235898377.1
KEYWORDS    RefSeq.
SOURCE      Winogradskyella ouciana
  ORGANISM  Winogradskyella ouciana
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Winogradskyella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10851.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Winogradskyella ouciana"
                     /db_xref="taxon:2608631"
     Protein         1..180
                     /product="DUF2652 domain-containing protein"
                     /calculated_mol_wt=20715
     Region          13..131
                     /region_name="DUF2652"
                     /note="Protein of unknown function (DUF2652); pfam10851"
                     /db_xref="CDD:431521"
ORIGIN      
        1 msetdyelns kvvpsllnei iysneiglkv seiegdavlf fkrgelpplk dliaqceffy
       61 tqfyrqlral hddfkdvkdg kkisqtlglk ivlhfakgvd svqigkhikl vgedvivahr
      121 llknkidcee yillsnellk qytfneadts tyldqlkkgk dyyehigeie ysyidfkpli
//
LOCUS       WP_235898579             729 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxy terminal-processing peptidase [Parahaliea maris].
ACCESSION   WP_235898579
VERSION     WP_235898579.1
KEYWORDS    RefSeq.
SOURCE      Parahaliea maris
  ORGANISM  Parahaliea maris
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cellvibrionales; Halieaceae; Parahaliea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023246.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11818.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Parahaliea maris"
                     /db_xref="taxon:2716870"
     Protein         1..729
                     /product="carboxy terminal-processing peptidase"
                     /EC_number="3.4.21.102"
                     /calculated_mol_wt=82466
     Region          17..665
                     /region_name="PRK11186"
                     /note="carboxy terminal-processing peptidase"
                     /db_xref="CDD:236873"
ORIGIN      
        1 mnnptallrl arrgltttia sglllvgsag halatieysd aqretmvdmi eqleerhyak
       61 lryddelssq hldnyinsld sgrmfftaad laeferyrtv mdddlhkgrl dagfnifnrf
      121 qqrleqrlen vvdtlpsava tmdfdveedy lldgkerpwa adqaelddrw rrhlknqvls
      181 lrmadkpqee iaetlekryn nqlkrvkqyn nqdvfqiyan altelydpht nylsprrsen
      241 fninmslsle gigavlqled eytkvvrlvp agpadkqgel qpsdrivgva qgedgefedv
      301 igwrldevve lirgpkgstv rlqvmaskaa ktgerkvvti vrnkvkleeq saqkkvlevp
      361 ngdkvmkvgv idipafyidf damrrgekdy ksttrdvrkl ldelqnedhv dgvvidlrnn
      421 gggslqeane ltglfieygp tvqirhssrr vwrdgkrlrg pyyegpmvvl inrlsasase
      481 ifagaiqdyq rgiivgdrsf gkgtvqtlip lpegqlklte skfyrisgds tqhrgvvpdv
      541 tfpalydhee igesaldhal nwdkinpvrh rryqdiddlv pevtrlfqer slhnpdfvfl
      601 edqvelaeas reikslplne sarralvdqq dekalaienk rraalgeell tsldeeeevt
      661 edlaeedtgn venssaaqge eqlataedea aedhdvllte agnilvdall lqerrfaaht
      721 pnppkeqvd
//
LOCUS       WP_235898657             126 aa            linear   BCT 02-MAR-2025
DEFINITION  YMGG-like glycine zipper-containing protein [Parahaliea maris].
ACCESSION   WP_235898657
VERSION     WP_235898657.1
KEYWORDS    RefSeq.
SOURCE      Parahaliea maris
  ORGANISM  Parahaliea maris
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cellvibrionales; Halieaceae; Parahaliea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024833.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13441.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Parahaliea maris"
                     /db_xref="taxon:2716870"
     Protein         1..126
                     /product="YMGG-like glycine zipper-containing protein"
                     /calculated_mol_wt=12752
ORIGIN      
        1 maagihkfta tpmaaclavt laactttdev iidkkgvnma ryeqdlaecr syadevrtge
       61 kvakgaasga vvggligaav gnsrdvqqga gvgavsggar gaaqgereev rvvkqclrgr
      121 gyrvln
//
LOCUS       WP_235898712             463 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidylprolyl isomerase [Parahaliea maris].
ACCESSION   WP_235898712
VERSION     WP_235898712.1
KEYWORDS    RefSeq.
SOURCE      Parahaliea maris
  ORGANISM  Parahaliea maris
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cellvibrionales; Halieaceae; Parahaliea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025002.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13616.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Parahaliea maris"
                     /db_xref="taxon:2716870"
     Protein         1..463
                     /product="peptidylprolyl isomerase"
                     /EC_number="5.2.1.8"
                     /calculated_mol_wt=51313
     Region          61..462
                     /region_name="PRK10770"
                     /note="peptidyl-prolyl cis-trans isomerase SurA;
                     Provisional"
                     /db_xref="CDD:236758"
ORIGIN      
        1 msikafaanp trliptlrvt pslrvipaqa avrrtgihfq twaltlalal glsitiaptq
       61 aatevldqvv aivdddvima selrerlgtv tetlqargme mppedelire tldrlilesi
      121 qlqmgqrvgv risdaqldqa variaaqnrm nvdqfiarle qdgqsyaamr envrremvlq
      181 rvqagnvsqr iqitdqeidn flnteegqal tqpeyrivha llplspdapa dekaaaeahv
      241 dqllqrirag epfdeviass ggkytftggd lgwrkksdlp slfaeaappl aegetsdpie
      301 sasgihlinm nakrggeqiv sqtkvrhili kpseiltdda arqkaadlkq rieggedfae
      361 lakeysedig sareggdlgw tqrgqmvpef enamesatig eitnpvrsqf gwhilevter
      421 rqqdmtdqai rnkaaeylhg rkyqeeldaw lrkirdeafv dik
//
LOCUS       WP_235898757             185 aa            linear   BCT 02-MAR-2025
DEFINITION  thioredoxin family protein, partial [Acinetobacter baumannii].
ACCESSION   WP_235898757
VERSION     WP_235898757.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024590.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13192.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..>185
                     /product="thioredoxin family protein"
     Region          1..>185
                     /region_name="PRK15317"
                     /note="alkyl hydroperoxide reductase subunit F;
                     Provisional"
                     /db_xref="CDD:237942"
ORIGIN      
        1 kaaqikelvt eiaelsdkvt arfdgnntrr psfgvakage qprvffaglp mgheftslil
       61 allqvsgyap kvsdevlnqi kglnlkanfd vfvslschnc pdvvqalnli aiynpnttat
      121 midgaffqde veqrkimavp mvfqdnehig qgrmtleeiv akldtnsaek daaalnakda
      181 fdvlv
//
LOCUS       WP_235898780             325 aa            linear   BCT 02-MAR-2025
DEFINITION  phage terminase small subunit [Yersinia alsatica].
ACCESSION   WP_235898780
VERSION     WP_235898780.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 325)
  AUTHORS   Linderoth,N.A., Ziermann,R., Haggard-Ljungquist,E., Christie,G.E.
            and Calendar,R.
  TITLE     Nucleotide sequence of the DNA packaging and capsid synthesis genes
            of bacteriophage P2
  JOURNAL   Nucleic Acids Res 19 (25), 7207-7214 (1991)
   PUBMED   1837355
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017731.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05944.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     gene            1..325
                     /gene="gpM"
     Protein         1..325
                     /product="phage terminase small subunit"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_process="GO:0019069 - viral capsid assembly [Evidence
                     IEA]"
                     /calculated_mol_wt=35050
     Region          24..245
                     /region_name="Phage_term_smal"
                     /note="Phage small terminase subunit; cl19614"
                     /db_xref="CDD:450336"
ORIGIN      
        1 msrfngrqll tggpaaplrl ggmmltpaqr hfdkvmaerr gtkddvvqgs ayeqqlyrlr
       61 idqrrlsqyq shitradmkr emlpaydgwi egvlsantgq sdeivttcmv wsvdaglyrd
      121 alrlaeyvig hnlpmadkyq rtaacfvvdq lseaallnfk iastnnpaie idillrlqel
      181 tadkdmpdea rakllkaigy tlrqstnqad qasaliwlqr alaantdvgv kkdievlern
      241 lkkaaliaas aegsgvtdse qttatditav sgadvvatlp dapavtaevp astpakpask
      301 tksataakkp aakaktnavr akrtp
//
LOCUS       WP_235898588             305 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF922 domain-containing protein [Parahaliea maris].
ACCESSION   WP_235898588
VERSION     WP_235898588.1
KEYWORDS    RefSeq.
SOURCE      Parahaliea maris
  ORGANISM  Parahaliea maris
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cellvibrionales; Halieaceae; Parahaliea.
REFERENCE   1  (residues 1 to 305)
  AUTHORS   Lenart,A., Dudkiewicz,M., Grynberg,M. and Pawlowski,K.
  TITLE     CLCAs - a family of metalloproteases of intriguing phylogenetic
            distribution and with cases of substituted catalytic sites
  JOURNAL   PLoS One 8 (5), e62272 (2013)
   PUBMED   23671590
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017816.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06037.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Parahaliea maris"
                     /db_xref="taxon:2716870"
     Protein         1..305
                     /product="DUF922 domain-containing protein"
                     /calculated_mol_wt=32819
     Region          140..305
                     /region_name="DUF922"
                     /note="Bacterial protein of unknown function (DUF922);
                     cl02415"
                     /db_xref="CDD:470570"
ORIGIN      
        1 mliaafltlg gatgckiqvv aplgadvvss sgafdcragt tctvvvdhpy yyeafsvepk
       61 pgyafttfle gqgrfcggse kpvcgplntr gfpgneglsa llgqddeffl epevvadgtl
      121 pvddsstlkv tlresvnldh ypihgdsvet iqaslysqdn pfynaepvgs giqvgitqpg
      181 ydysfsaerl qpgssncrfa altidatiti vmpglqqrht lpanlqarwd efylallahe
      241 gghanfvrds feeivaffes rgqfscdtis eevdavleqa aagydqrsfd ydvetnhgvf
      301 qgvvf
//
LOCUS       WP_235898805             766 aa            linear   BCT 02-MAR-2025
DEFINITION  TcfC E-set like domain-containing protein [Yersinia alsatica].
ACCESSION   WP_235898805
VERSION     WP_235898805.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028277.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16967.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..766
                     /product="TcfC E-set like domain-containing protein"
                     /calculated_mol_wt=84617
     Region          263..331
                     /region_name="TcfC"
                     /note="E-set like domain; pfam16967"
                     /db_xref="CDD:435681"
     Region          <463..712
                     /region_name="FimD"
                     /note="Outer membrane usher protein FimD/PapC [Cell
                     motility, Extracellular structures]; COG3188"
                     /db_xref="CDD:442421"
ORIGIN      
        1 mkntiiaspa llfilllqts nsiyaqniti ehlvpagfsa idehktlqll gifdgkalpg
       61 piffseskne lsfdpqqyrn nhidepsial leqilpqipy lqcengcdyi lsnhrvmldk
      121 vnnvvtitnn nsrylmpvtt wglvhnqsfd vrmtarnysa msargqgylg lplqsygfvq
      181 wfynsvrtkn hypfagqsqy qqqtqigmgs wylqknfqal ylrtgkqnnl dnsagsihtl
      241 inpaldqfit lgsqsylald kpsagslvly atvdgdyeiy rdnqlirrip aqlgrneidy
      301 nrlpggyyni dirlvdytgr vvsqesqtis nigtqtnhgw fltmgksakr dknkphhlaq
      361 fgrsmaiqni qtnislladd arhwaaegni shplgissln itptlgvmsg ekrsggylrl
      421 nggnstvgyl svaryqtpdi siyapssgst sasysrrvgp tqlsyqfnqy knnqqhriqs
      481 swnwrqpqfg lnlsvgaqkg gqwhsqnnyg vfinttlslr qssasinsay trqqlstsan
      541 yqkeftdnhg tsslgisgst sgksngigtf aqrsgsrgdi sarmgvdnki anggisysgm
      601 vaispqgaal grssysgsal liktpelsgt pysfnaegnp itggglyaip ipryqdrffv
      661 rthnnrsdld mniqlpvniv rahpgqvfvs kaditldily ngflkdsqgq pvsgtiketn
      721 dtvhpnglfa insnvvlkni tvqngsvryh cdmqqqrdhi ylchsn
//
LOCUS       WP_235898827             508 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2867 domain-containing protein [Yersinia alsatica].
ACCESSION   WP_235898827
VERSION     WP_235898827.1
KEYWORDS    RefSeq.
SOURCE      Yersinia alsatica
  ORGANISM  Yersinia alsatica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022517.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11066.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Yersinia alsatica"
                     /db_xref="taxon:2890317"
     Protein         1..508
                     /product="DUF2867 domain-containing protein"
                     /calculated_mol_wt=56624
     Region          6..302
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(10,12..13,15,34..36,74..76,116..118,128,132,
                     151..154)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(88,118,128,132)
                     /site_type="active"
                     /db_xref="CDD:187535"
     Region          340..469
                     /region_name="DUF2867"
                     /note="Protein of unknown function (DUF2867); pfam11066"
                     /db_xref="CDD:431633"
ORIGIN      
        1 mtpqrilvlg asgyigqhli pklsqqghqv iaaarriewl keqqwpgvdc rfvdlyqpat
       61 lhavlpdidv vyylvhgmgd gqdlieqeri aannmkaalq hvastssspv kqviylgasq
      121 pgdsnsthlv arkltgdllr qsgipvtelr asiiigpgsa afevmrdmvy nlpiltpplw
      181 vrsksspval enllvyltel lnhpatenrv fdvagpeyis yqtmferfia isgkrrwlvp
      241 iplptrfisv yfinmitsvp tsiasalieg lnhdlpadgq alqalipqql isfddavket
      301 lrredevvds adwgydpear arwrpgygfy pkqagcqlyt tassealwhv vqqiggkegy
      361 fygnllwktr awmddlaggg vvygrperet lelgdlidgw kvitlkpmrq lammfgmkap
      421 glgrltftik dlggrrsfdv rawwhpagfn gllywfvmmp ahlfifrgma qrittlaeqy
      481 drehqstgpq sasstnkpdi ktvdtsaq
//
LOCUS       WP_235898841             298 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein, partial [Acinetobacter
            baumannii].
ACCESSION   WP_235898841
VERSION     WP_235898841.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (residues 1 to 298)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 298)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 298)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         <1..298
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
     Region          <1..297
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(8,38,40,71,73,279..281,283,285)
                     /site_type="active"
                     /db_xref="CDD:173849"
ORIGIN      
        1 islmvhtiga ppiqhfgsee lkarvlpgii sgekisalai tepgggsdva alqtkavrdg
       61 dyyivsgekt fitsgirady ytvavrtdpt ktgaegisml lidahsegit ktplkkmgww
      121 asdtahlhfd qvrvpasnll gkenagfkvi mnnfnmerff lgvvaygyal vcyeealewa
      181 qqrktfgkrl idhqvvrhkl vdmatqltst ralleetawk mtqpklqgpe lvvqismlkn
      241 vatrtmqfca daavqtlggm gfmrgtkser iyrevkvnmi gggaeeimkd liskqlgy
//
LOCUS       WP_235898911             263 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Iodidimonas gelatinilytica].
ACCESSION   WP_235898911
VERSION     WP_235898911.1
KEYWORDS    RefSeq.
SOURCE      Iodidimonas gelatinilytica
  ORGANISM  Iodidimonas gelatinilytica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Iodidimonadales; Iodidimonadaceae; Iodidimonas.
REFERENCE   1  (residues 1 to 263)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Iodidimonas gelatinilytica"
                     /db_xref="taxon:1236966"
     Protein         1..263
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=28913
     Region          2..>202
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 mpgrteymer yaeviadfle kgfavaildm rnhglsdrpl anrqahfvad fapmaddvar
       61 fvaqgaaldl prpftllghs mgghvalrav hdhpqlarsv dklvlcapml rirfsplplw
      121 lvrglvalag algfweryal gqgdwaggka rarlmrllts daqrfavedw qvaqnpdlkl
      181 ggvtwgwlra alnscdllaq kampkrsrcr ralsspeaig wwittpaapl ppacpmrmwl
      241 ncqtaamnha rggcdpgrvf qgr
//
LOCUS       WP_235898582             775 aa            linear   BCT 02-MAR-2025
DEFINITION  fatty acid cis/trans isomerase [Parahaliea maris].
ACCESSION   WP_235898582
VERSION     WP_235898582.1
KEYWORDS    RefSeq.
SOURCE      Parahaliea maris
  ORGANISM  Parahaliea maris
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cellvibrionales; Halieaceae; Parahaliea.
REFERENCE   1  (residues 1 to 775)
  AUTHORS   Eberlein,C., Baumgarten,T., Starke,S. and Heipieper,H.J.
  TITLE     Immediate response mechanisms of Gram-negative solvent-tolerant
            bacteria to cope with environmental stress: cis-trans isomerization
            of unsaturated fatty acids and outer membrane vesicle secretion
  JOURNAL   Appl Microbiol Biotechnol 102 (6), 2583-2593 (2018)
   PUBMED   29450619
REFERENCE   2  (residues 1 to 775)
  AUTHORS   Junker,F. and Ramos,J.L.
  TITLE     Involvement of the cis/trans isomerase Cti in solvent resistance of
            Pseudomonas putida DOT-T1E
  JOURNAL   J Bacteriol 181 (18), 5693-5700 (1999)
   PUBMED   10482510
REFERENCE   3  (residues 1 to 775)
  AUTHORS   Holtwick,R., Meinhardt,F. and Keweloh,H.
  TITLE     cis-trans isomerization of unsaturated fatty acids: cloning and
            sequencing of the cti gene from Pseudomonas putida P8
  JOURNAL   Appl Environ Microbiol 63 (11), 4292-4297 (1997)
   PUBMED   9361416
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018620.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06934.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Parahaliea maris"
                     /db_xref="taxon:2716870"
     Protein         1..775
                     /product="fatty acid cis/trans isomerase"
                     /calculated_mol_wt=88926
     Region          91..765
                     /region_name="CTI"
                     /note="Fatty acid cis/trans isomerase (CTI); pfam06934"
                     /db_xref="CDD:429196"
ORIGIN      
        1 msrtrkteqt rryffpllgl lllgfaslaa pgaraaledt asaahdilqn rcmvchgcyd
       61 apcqlkleas qglargasqd lvydgarlmt anltrlfdda rsvkrwrkkg fypvvdddnp
      121 edgvlyrmle lkqahplapr gpvdnsfdfs lyreqqctrq edfdsyaqdy plwgmpfglp
      181 glqpdehqam irwlesgapp vpqadlappl qaqfdawesf lngdsnkerl mgrylyehlf
      241 latlflqasd epvwfrlvrs atppgepidl istrrpyddp gvkrvyyrlq rmpitplgks
      301 hlayrfdeer rewyrqnfle pdytvpelpg ykqqvaanpf ksfvaipvrs ryrflleeae
      361 ftimnfikgp vcrgqialnv iedrfwvmfm dpesispesd gaflaresdn lrlpvsatgt
      421 vvdlvtwrsy akshdryqka kveflaeqln rddrnidmdv lwdgdgknpn aaltifrhfd
      481 tatvvkgfvg etpktawvis yallerihyl lvagfdvyga vahqletrly mdflrmegel
      541 nflmflppee rkklrefwyr dapgfarsha fadselmser psdlhfssnd pkaeflgwmr
      601 qhihqasaer ydyhdkvakp vsealdslva aagkhnrfmp qvsflnvigg sgehaftllr
      661 dsgysnialp fleesrrlpg edkltvvqgf vgdhpnlffe vhekqlplfa ediaaletae
      721 dwevlrhrys varnapwfwr vsdsfhqrhl sadpiynglf dynrylgnpv ettaq
//
LOCUS       WP_235899024             337 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase family protein, partial [Acinetobacter
            baumannii].
ACCESSION   WP_235899024
VERSION     WP_235899024.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04851.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Acinetobacter baumannii"
                     /db_xref="taxon:470"
     Protein         1..>337
                     /product="DEAD/DEAH box helicase family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
     Region          6..>337
                     /region_name="PRK04914"
                     /note="RNA polymerase-associated protein RapA"
                     /db_xref="CDD:235319"
ORIGIN      
        1 meklqqyaig qrwlsdtete lglgvlidvd ersvsilfpk sdetrvyarn naplsriifn
       61 vndevqdqeg nkwnvesied rhgvlrynvv rtlengeqer kalnetriga qiqlskpldr
      121 llasqidyke wydlrieaml mqaqmqtspl rglvgarvgl iphqlyiahe vgkrfaprvl
      181 ladevglgkt ieagliihqq lktgrseril ilvpdslqyq wmiemrrrfn lqfslfdltr
      241 tasikehdpe lnpflteqci iasvdlmvdh ddlreqalea gfdllvvdea hhlmwseeeg
      301 gndrydlvee laentagvll ltatpeqlgv eshfarl
//
LOCUS       WP_235899038              51 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5680 domain-containing protein [Peptostreptococcus porci].
ACCESSION   WP_235899038
VERSION     WP_235899038.1
KEYWORDS    RefSeq.
SOURCE      Peptostreptococcus porci
  ORGANISM  Peptostreptococcus porci
            Bacteria; Bacillati; Bacillota; Clostridia; Peptostreptococcales;
            Peptostreptococcaceae; Peptostreptococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039500.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18931.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..51
                     /organism="Peptostreptococcus porci"
                     /db_xref="taxon:2652282"
     Protein         1..51
                     /product="DUF5680 domain-containing protein"
                     /calculated_mol_wt=6177
     Region          <2..47
                     /region_name="DUF5680"
                     /note="Domain of unknown function (DUF5680); pfam18931"
                     /db_xref="CDD:408701"
ORIGIN      
        1 mpfrgpeiyv kgdyhyhckv dggferfcgy edifyenerv yewyfhgetv k
//
LOCUS       WP_235899040             124 aa            linear   BCT 02-MAR-2025
DEFINITION  lactococcin 972 family bacteriocin [Peptostreptococcus porci].
ACCESSION   WP_235899040
VERSION     WP_235899040.1
KEYWORDS    RefSeq.
SOURCE      Peptostreptococcus porci
  ORGANISM  Peptostreptococcus porci
            Bacteria; Bacillati; Bacillota; Clostridia; Peptostreptococcales;
            Peptostreptococcaceae; Peptostreptococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021219.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09683.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Peptostreptococcus porci"
                     /db_xref="taxon:2652282"
     Protein         1..124
                     /product="lactococcin 972 family bacteriocin"
                     /calculated_mol_wt=13622
     Region          60..120
                     /region_name="Lactococcin_972"
                     /note="Bacteriocin (Lactococcin_972); cl09891"
                     /db_xref="CDD:447849"
ORIGIN      
        1 mslvlltglm lassvpvfaa aeetnlpyve glgyemevfe edytqptlfs ydsgwknflg
       61 gkwrhgvgsr yvwskydhsk kthkttvqga ggkfsysgwi sagsraeasw ekalsgnraw
      121 advk
//
LOCUS       WP_235899048             184 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF308 domain-containing protein [Peptostreptococcus porci].
ACCESSION   WP_235899048
VERSION     WP_235899048.1
KEYWORDS    RefSeq.
SOURCE      Peptostreptococcus porci
  ORGANISM  Peptostreptococcus porci
            Bacteria; Bacillati; Bacillota; Clostridia; Peptostreptococcales;
            Peptostreptococcaceae; Peptostreptococcus.
REFERENCE   1  (residues 1 to 184)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015674.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03729.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Peptostreptococcus porci"
                     /db_xref="taxon:2652282"
     Protein         1..184
                     /product="DUF308 domain-containing protein"
                     /calculated_mol_wt=20787
ORIGIN      
        1 misnfnfsgi fdsknskkfi vlgvillaig tycisrknig invfswgmgi aflygawlsl
       61 knlneltrys dkkeinkarm kcmglfvtai llfifprqvn mllsisiglf llvrelqnym
      121 nyrrfstvyf stsnvlkllv gillivsplf lsrflvsils giviifgvyf ivvginiinr
      181 egnr
//
LOCUS       WP_235899145             215 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Suipraeoptans intestinalis].
ACCESSION   WP_235899145
VERSION     WP_235899145.1
KEYWORDS    RefSeq.
SOURCE      Suipraeoptans intestinalis
  ORGANISM  Suipraeoptans intestinalis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Suipraeoptans.
REFERENCE   1  (residues 1 to 215)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024091.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12679.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Suipraeoptans intestinalis"
                     /db_xref="taxon:2606628"
     Protein         1..215
                     /product="ABC transporter permease subunit"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=23628
     Region          <2..>191
                     /region_name="ABC_perm_CPBP"
                     /note="ABC transporter permease subunit/CPBP intramembrane
                     protease; NF041647"
                     /db_xref="CDD:469529"
ORIGIN      
        1 mlesyrqtll vervedlrql tvfevntdns qmyiqdkaka tgkmagtmlp yfvtvfclag
       61 amgigtdmia gekergtmys llvtpiqrss ivlgkvfslm tisgisaivy vtalavaant
      121 ifkdklsgan fhldiqagqi amlgvlllfm sflystiial isvfaktvke agtyimpaym
      181 lvliiglism fqqenprkas glsrfttmpw rfres
//
LOCUS       WP_235899226             628 aa            linear   BCT 02-MAR-2025
DEFINITION  sialate O-acetylesterase [Hallella mizrahii].
ACCESSION   WP_235899226
VERSION     WP_235899226.1
KEYWORDS    RefSeq.
SOURCE      Hallella mizrahii
  ORGANISM  Hallella mizrahii
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Prevotellaceae; Hallella.
REFERENCE   1  (residues 1 to 628)
  AUTHORS   Surolia,I., Pirnie,S.P., Chellappa,V., Taylor,K.N., Cariappa,A.,
            Moya,J., Liu,H., Bell,D.W., Driscoll,D.R., Diederichs,S.,
            Haider,K., Netravali,I., Le,S., Elia,R., Dow,E., Lee,A.,
            Freudenberg,J., De Jager,P.L., Chretien,Y., Varki,A.,
            MacDonald,M.E., Gillis,T., Behrens,T.W., Bloch,D., Collier,D.,
            Korzenik,J., Podolsky,D.K., Hafler,D., Murali,M., Sands,B.,
            Stone,J.H., Gregersen,P.K. and Pillai,S.
  TITLE     Functionally defective germline variants of sialic acid
            acetylesterase in autoimmunity
  JOURNAL   Nature 466 (7303), 243-247 (2010)
   PUBMED   20555325
REFERENCE   2  (residues 1 to 628)
  AUTHORS   Bitto,E., Bingman,C.A., McCoy,J.G., Allard,S.T., Wesenberg,G.E. and
            Phillips,G.N. Jr.
  TITLE     The structure at 1.6 Angstroms resolution of the protein product of
            the At4g34215 gene from Arabidopsis thaliana
  JOURNAL   Acta Crystallogr D Biol Crystallogr 61 (Pt 12), 1655-1661 (2005)
   PUBMED   16301800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015585.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03629.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Hallella mizrahii"
                     /db_xref="taxon:2606637"
     Protein         1..628
                     /product="sialate O-acetylesterase"
                     /calculated_mol_wt=70006
     Region          8..257
                     /region_name="SASA"
                     /note="Carbohydrate esterase, sialic acid-specific
                     acetylesterase; pfam03629"
                     /db_xref="CDD:427409"
     Region          286..352
                     /region_name="E_set"
                     /note="Early set domain associated with the catalytic
                     domain of sugar utilizing enzymes at either the N or C
                     terminus; cl28984"
                     /db_xref="CDD:475140"
     Region          324..628
                     /region_name="Fes"
                     /note="Enterochelin esterase or related enzyme [Inorganic
                     ion transport and metabolism]; COG2382"
                     /db_xref="CDD:441948"
ORIGIN      
        1 meaapdpnfy iflcfgqsnm egnakiepqd ltgvdprfqm maavddhklg rkmgewytat
       61 pplcrentgl tpvdyfgrem varlpkdvrv gvitvavggc hietfmrdsv dnyvktrapq
      121 wmkgmlacyg nnpynrlvtl arkaqqvgvi kgillhqges ntgdvrwpek vawvynqlia
      181 dlhlksedvp llagevvrad ghgrcvamna iidklpetih tahvissegc tngpdnlhfd
      241 aagyrelgrr yaykmlsllg ypvfksvavp adavtsetae pgneypkids srrayfrlha
      301 paaqhvvadi cgkkydmqrd etgtwtgvsd plpvgfhyyf fwvdgvqvtd patdtyfgcc
      361 rqasalevpe gsegdyyrpq qgvakgqvrs fqyyagsthq wrramvytpa eyeqgkkryp
      421 vlylqhgmge detgwshqgk mqnimdnlia agkavpmivv mesgdvkapy rpdkdggnqa
      481 glsqygatfy qvlindlipt idknfrtktd rdhramagls wgghqtfdmv fthldkfsyc
      541 ggfsgaifgl dvnktydgif srpdevnskl htlflgcgse enmgtsklik dlrgagvkve
      601 dyvspgtahe wltwrrclke fvvklfkk
//
LOCUS       WP_235899150             126 aa            linear   BCT 02-MAR-2025
DEFINITION  pirin family protein [Suipraeoptans intestinalis].
ACCESSION   WP_235899150
VERSION     WP_235899150.1
KEYWORDS    RefSeq.
SOURCE      Suipraeoptans intestinalis
  ORGANISM  Suipraeoptans intestinalis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Suipraeoptans.
REFERENCE   1  (residues 1 to 126)
  AUTHORS   Pang,H., Bartlam,M., Zeng,Q., Miyatake,H., Hisano,T., Miki,K.,
            Wong,L.L., Gao,G.F. and Rao,Z.
  TITLE     Crystal structure of human pirin: an iron-binding nuclear protein
            and transcription cofactor
  JOURNAL   J Biol Chem 279 (2), 1491-1498 (2004)
   PUBMED   14573596
REFERENCE   2  (residues 1 to 126)
  AUTHORS   Orzaez,D., de Jong,A.J. and Woltering,E.J.
  TITLE     A tomato homologue of the human protein PIRIN is induced during
            programmed cell death
  JOURNAL   Plant Mol Biol 46 (4), 459-468 (2001)
   PUBMED   11485202
REFERENCE   3  (residues 1 to 126)
  AUTHORS   Dechend,R., Hirano,F., Lehmann,K., Heissmeyer,V., Ansieau,S.,
            Wulczyn,F.G., Scheidereit,C. and Leutz,A.
  TITLE     The Bcl-3 oncoprotein acts as a bridging factor between
            NF-kappaB/Rel and nuclear co-regulators
  JOURNAL   Oncogene 18 (22), 3316-3323 (1999)
   PUBMED   10362352
REFERENCE   4  (residues 1 to 126)
  AUTHORS   Wendler,W.M., Kremmer,E., Forster,R. and Winnacker,E.L.
  TITLE     Identification of pirin, a novel highly conserved nuclear protein
  JOURNAL   J Biol Chem 272 (13), 8482-8489 (1997)
   PUBMED   9079676
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014708.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02678.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Suipraeoptans intestinalis"
                     /db_xref="taxon:2606628"
     Protein         1..126
                     /product="pirin family protein"
                     /calculated_mol_wt=14150
     Region          20..121
                     /region_name="cupin_pirin_N"
                     /note="pirin, N-terminal cupin domain; cd02909"
                     /db_xref="CDD:380374"
     Site            order(23,25..26,35..38,40,42,62..64,68,91,93,95,115,
                     118..121)
                     /site_type="other"
                     /note="intramolecular domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:380374"
ORIGIN      
        1 mnrtirkkvk gfqtvdgggv klvrvlgsqt akefdpilml dsfdstnpqd yiagfpphph
       61 rgietisyvw qgkmkhkdnl gfedtvedge vqwmtagsgi iheeqlpase rmlgvqlwln
      121 lrqrtk
//
LOCUS       WP_235899165             978 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein
            [Suipraeoptans intestinalis].
ACCESSION   WP_235899165
VERSION     WP_235899165.1
KEYWORDS    RefSeq.
SOURCE      Suipraeoptans intestinalis
  ORGANISM  Suipraeoptans intestinalis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Suipraeoptans.
REFERENCE   1  (residues 1 to 978)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Suipraeoptans intestinalis"
                     /db_xref="taxon:2606628"
     Protein         1..978
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /calculated_mol_wt=108395
     Region          32..>367
                     /region_name="pbp2_mrdA"
                     /note="penicillin-binding protein 2; TIGR03423"
                     /db_xref="CDD:274573"
     Region          <606..954
                     /region_name="pbp2_mrdA"
                     /note="penicillin-binding protein 2; TIGR03423"
                     /db_xref="CDD:274573"
ORIGIN      
        1 mynlweriks gifelvqsrv fvvvllfcvm sgilvqrvfy lqivkgqeyf ddyklqiqkt
       61 rsvegtrgni ydrngkllay nelayavmie dngdyesltq knkeinkvvt kvirmvegng
      121 dsvinnfgii ldsnqeyrfm eknetarmrf iadvygkrti dqlsekqqna sakdvidylc
      181 tdkisgygid qkklspaevl klvniryais lnsyqkyiat tiaddvsdet vadimenlds
      241 lqgvsieees lrrytdsvcf anvigytgqi steeydalsk eeqeaydktd tigkagiekt
      301 mdsvlqgekg eeklyvnsvg kvietakgkn pkagnnlylt idadlqkvay hvieqelagi
      361 liskikniad ydretvqegn dviipitdvy htlvnndild mkhfsaedar egekeieavf
      421 lerkeavkes lkkslqdpqa paltnlgkee qaymnylvnh vlssslmknr idkgdagykn
      481 wkkdgsinay tflqhalsqn widtsllrey vkgghtysss eelynamiey gldqlssdse
      541 fdkilykyli vggsvtgrql cmalfeqgil qedagsyegl kagsvdaysf imskienlel
      601 tpgqlalepc tgsmvvtdpg sgqvlasvsy pgydnnrlvn tmdsnyynkl vmdksrpfyn
      661 natqertapg svykpltava gltegiidln tyvnctgsfd rvepspkcwi ypgahgplnv
      721 egaiahscni ffyelgyqms lqkadgtasg qtggnrttdg assfssrkgt dilkkyaeef
      781 glgstsgiei pesepqisde ysilsaigqg tnnyttsqla rymatmankg nlydltllqk
      841 etsskgelik eyqpkvkkqa tnvadttwna vqsgmrqvvt styattfski ngsgvsvsgk
      901 tgtaqqsrth adhslfagya psddpkiafs iriangygst haveigkyvl eyyyqltdps
      961 eiltgkafnv ssdiivtd
//
LOCUS       WP_235899244             192 aa            linear   BCT 02-MAR-2025
DEFINITION  FtsL-like putative cell division protein [Hallella mizrahii].
ACCESSION   WP_235899244
VERSION     WP_235899244.1
KEYWORDS    RefSeq.
SOURCE      Hallella mizrahii
  ORGANISM  Hallella mizrahii
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Prevotellaceae; Hallella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039650.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19579.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Hallella mizrahii"
                     /db_xref="taxon:2606637"
     Protein         1..192
                     /product="FtsL-like putative cell division protein"
                     /calculated_mol_wt=21491
     Region          89..190
                     /region_name="FtsL_2"
                     /note="Bacteriodetes cell division protein (FtsL-like);
                     pfam19579"
                     /db_xref="CDD:466122"
ORIGIN      
        1 mkkqeqisnn itdnkdgtrs lkdilgtpad dkannttatt deekpngqtt enadknekkq
       61 eeslpslkev ieeqatedea pqsrlfslkk ilggdilyts fvrkqiwlfm ligaflivyi
      121 gsryscqqdl iqidklqvkl kdakykalss tsqlteisre snviellknn kdsvlkipsa
      181 ppykievpee gk
//
LOCUS       WP_235899259             396 aa            linear   BCT 02-MAR-2025
DEFINITION  THUMP-like domain-containing protein [Hallella mizrahii].
ACCESSION   WP_235899259
VERSION     WP_235899259.1
KEYWORDS    RefSeq.
SOURCE      Hallella mizrahii
  ORGANISM  Hallella mizrahii
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Prevotellaceae; Hallella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037043.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18096.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Hallella mizrahii"
                     /db_xref="taxon:2606637"
     Protein         1..396
                     /product="THUMP-like domain-containing protein"
                     /calculated_mol_wt=45157
     Region          <82..>138
                     /region_name="PRK13943"
                     /note="protein-L-isoaspartate O-methyltransferase;
                     Provisional"
                     /db_xref="CDD:237568"
     Region          324..394
                     /region_name="Thump_like"
                     /note="THUMP domain-like; pfam18096"
                     /db_xref="CDD:465646"
ORIGIN      
        1 mqhrkddvrq lalqadrype vdmpyvldqi agwkkakekv prwaeckdii ypphlnmeqc
       61 ssqttaeykr qlaakilgaq rknmtlvdlt ggwgvdfsfl aqifgkavyv erdehlcrla
      121 rhnmpclgls davvvnddst kylaelkddr qrfffidpar rdvqgrkvag leactpdvlq
      181 lfdkmmslas gvmmklspml dwheavkqlr katsqtvafd vhilsvhnec kellvvathh
      241 qhpltvtcvn dgetfsyyae eemtsairys naeqlqgrrf lyvpnaslmk agcfpelcar
      301 ydlemadans hlflsqemip dfpgrqfeil aisslnkrev rqtlkdlgqa nvavrnfpmt
      361 avelrkrlhl rdggnsyifa ttiqrkhllf lcrpis
//
LOCUS       WP_235899285             414 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4876 domain-containing protein [Hallella mizrahii].
ACCESSION   WP_235899285
VERSION     WP_235899285.1
KEYWORDS    RefSeq.
SOURCE      Hallella mizrahii
  ORGANISM  Hallella mizrahii
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Prevotellaceae; Hallella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027540.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16215.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Hallella mizrahii"
                     /db_xref="taxon:2606637"
     Protein         1..414
                     /product="DUF4876 domain-containing protein"
                     /calculated_mol_wt=44528
     Region          43..>91
                     /region_name="CarboxypepD_reg"
                     /note="Carboxypeptidase regulatory-like domain; pfam13620"
                     /db_xref="CDD:433354"
     Region          141..>246
                     /region_name="LTD"
                     /note="Lamin Tail Domain; pfam00932"
                     /db_xref="CDD:460003"
     Region          227..408
                     /region_name="DUF4876"
                     /note="Protein of unknown function (DUF4876); pfam16215"
                     /db_xref="CDD:435222"
ORIGIN      
        1 mnnkkhiglw mllllcltlm vscvdysdtt rtinvdirve qptdataqla leghtvtltr
       61 egggettatt dangiahfte lipdvytvsv swplsadeyr qatgdtevnd gaivagsshs
      121 qllttdmtas pmilatqfti trslviskvf yagmkdvnkk nylaaqyiel ynqgdeavdi
      181 agmylglves ntspaytleq iasgfqdsvv vlkqlfripa atphlvnpgq svvitnsaid
      241 htanvgtpmn lsdadyeakd aqgktlnnpa tpalelvyta fsaiskmnig qggptgvvlf
      301 rsnaavnswq nvynygktsg sqwlaagisq ildgvdilky kntgtidlat krllpvidag
      361 atyihsasgy ngetvyrkks trkgakgqyi lqdtnnstnd fsvsstltpr nyey
//
LOCUS       WP_235899282             458 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Hallella mizrahii].
ACCESSION   WP_235899282
VERSION     WP_235899282.1
KEYWORDS    RefSeq.
SOURCE      Hallella mizrahii
  ORGANISM  Hallella mizrahii
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Prevotellaceae; Hallella.
REFERENCE   1  (residues 1 to 458)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Hallella mizrahii"
                     /db_xref="taxon:2606637"
     Protein         1..458
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=50684
     Region          62..177
                     /region_name="Bcp"
                     /note="Peroxiredoxin [Posttranslational modification,
                     protein turnover, chaperones]; COG1225"
                     /db_xref="CDD:440838"
     Region          208..444
                     /region_name="DAP2"
                     /note="Dipeptidyl aminopeptidase/acylaminoacyl peptidase
                     [Amino acid transport and metabolism]; COG1506"
                     /db_xref="CDD:441115"
ORIGIN      
        1 mtrnkkrmit qglcalllll splssvrtsa qgqdqrhnaa mmmpqdfdsk yatdlvkagt
       61 eapdfkmktv dgktfklskl rgkyvvldfw aswcpdcrrd ipemlrmydh fhgkgvefvg
      121 vsfdtdaqnw kkallkygir wtqvselvkf hdaqisktyg vkwipsmvli dpqgkvvlst
      181 vlwpklertl telfpegkak aidekvaieg skgklsaivs rpegvtgrmp vtilmhgfgg
      241 nknaqlmtll sdsllrhgia tvrfdfnghg esegkfeemt vpneiedakk vyayvcsqpw
      301 adstrvalig hsqggvvasm tagelgekrv aavalmapaa vlrddairgn tfgsvydpld
      361 ppavipmmgg hvklggnyvr tafrlpiyet aakyhgpaci vhgtgdrivp ytygerfhni
      421 wkgseydelp gfdhgfgqdl yravelacny vakninrk
//
LOCUS       WP_235899321             685 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5686 family protein [Hallella mizrahii].
ACCESSION   WP_235899321
VERSION     WP_235899321.1
KEYWORDS    RefSeq.
SOURCE      Hallella mizrahii
  ORGANISM  Hallella mizrahii
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Prevotellaceae; Hallella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039501.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18939.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Hallella mizrahii"
                     /db_xref="taxon:2606637"
     Protein         1..685
                     /product="DUF5686 family protein"
                     /calculated_mol_wt=80653
     Region          85..653
                     /region_name="DUF5686"
                     /note="Family of unknown function (DUF5686); pfam18939"
                     /db_xref="CDD:465922"
ORIGIN      
        1 mnihrgwhqi lilaffalma lplrarerad tallhrvfhy aatvdtthmq gyatyaynrf
       61 tididkknpl lmlvpslyvi ahghnrhyis etfsnniykr rrsdtqvllh tttiprgrqa
      121 wdrvlsylyp niynttiien yllspfhadn rkfyryrvaf llngtaritf rprrdntqlv
      181 sgealvdyyt grvlrctlkg eydmidftln itpgdkgftt llpqqceaet rfgllgnklr
      241 aqalacyhrp kppvdsfpkr ddyelmsslr pdtlspkelq lytqmfteky krdsveltkv
      301 nmpkkhdfvk dvlwdvignn alnrfksnfg vnnqgyirln pvlnplymsy dhnrgityki
      361 dlrgnyqfsd qkeitlrfrg gyafkqhrfy wrvplyyyfh krknaylkle vgngnnihsd
      421 kvrndiqkel pdtsqlstil drlhefrqad grlvlnydan sifgiqlgll fqqrtavnkl
      481 efrrfgwtdt yrsfapavql qyrpggwdgp iftidydrsf kgilrsntay erwemngeyi
      541 yrfnrlqslq ahgglgfyss kgkrayflsy enfrennipg gwnddwsgqf ellrsstyes
      601 sdyylrmnlt yespllflsw vpwaghyiem erfyvsalda hhvhpyievg ygfttrvfsv
      661 glftsngrgn rvfgckfgfe lfrkw
//
LOCUS       WP_235899330             709 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerophosphodiester phosphodiesterase family protein [Hallella
            mizrahii].
ACCESSION   WP_235899330
VERSION     WP_235899330.1
KEYWORDS    RefSeq.
SOURCE      Hallella mizrahii
  ORGANISM  Hallella mizrahii
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Prevotellaceae; Hallella.
REFERENCE   1  (residues 1 to 709)
  AUTHORS   Kim,H. and Farrand,S.K.
  TITLE     Characterization of the acc operon from the nopaline-type Ti
            plasmid pTiC58, which encodes utilization of agrocinopines A and B
            and susceptibility to agrocin 84
  JOURNAL   J Bacteriol 179 (23), 7559-7572 (1997)
   PUBMED   9393724
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03009.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Hallella mizrahii"
                     /db_xref="taxon:2606637"
     Protein         1..709
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /GO_function="GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=78340
     Region          4..232
                     /region_name="UgpQ"
                     /note="Glycerophosphoryl diester phosphodiesterase [Lipid
                     transport and metabolism]; COG0584"
                     /db_xref="CDD:440349"
     Region          249..614
                     /region_name="Pgu1"
                     /note="Polygalacturonase [Carbohydrate transport and
                     metabolism]; COG5434"
                     /db_xref="CDD:444185"
ORIGIN      
        1 maqdivvhrg analapenti asadsalayg atwievdvrp skdsvlfnlh detldrttng
       61 hgmladctad eirkldagaw fscryagtpv ptiadmldhl rgragvffdv krgtpveqlv
      121 qlvrskgfad ksffwfgdea mlkafvrlap dmkvkvnaad idrlkywqti crpayveiap
      181 rqitptfmry chahgikvma acqeddvsdf plvikekadl vnldrpelfl plkqgrqvil
      241 staqlgipad gktlcterlq qaidrlgreg rgtlvlnpgt yltgqlwlrs gvelhlqqga
      301 qllgaadpyl yhqvgaltdd grhdnacmal ivaqnahevr itgqgtidgn gtalalaads
      361 lyhlgkltda hyntrrlrps elvrpklvyf thcdgvtflg ihcknsagwg lsfqhcsnvm
      421 lqgvnmenra ywnndgidls dcrhvlvsdc kvnaaddgic lksydvhggc edvtirncev
      481 rssasavkfg taswgafrri hvfnltvfdt frsaiaiesv dgalvdsvtv ehvrafhtgn
      541 plfirlghrs garvgsvshi tvrdlvcevp fdrpdlnydl rgpevdffhn pfpssicgip
      601 ghpvrdviie datlvypgra skamaymplw rahdvpespd sypefsmfge lpawgfylrh
      661 vdgltlqgvk lslreadyrp afvledvadv kwkavevpgn mknqvyivh
//
LOCUS       WP_235899374             157 aa            linear   BCT 02-MAR-2025
DEFINITION  RpiB/LacA/LacB family sugar-phosphate isomerase [Suipraeoptans
            intestinalis].
ACCESSION   WP_235899374
VERSION     WP_235899374.1
KEYWORDS    RefSeq.
SOURCE      Suipraeoptans intestinalis
  ORGANISM  Suipraeoptans intestinalis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Suipraeoptans.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Zhang,R.G., Andersson,C.E., Skarina,T., Evdokimova,E.,
            Edwards,A.M., Joachimiak,A., Savchenko,A. and Mowbray,S.L.
  TITLE     The 2.2 A resolution structure of RpiB/AlsB from Escherichia coli
            illustrates a new approach to the ribose-5-phosphate isomerase
            reaction
  JOURNAL   J Mol Biol 332 (5), 1083-1094 (2003)
   PUBMED   14499611
REFERENCE   2  (residues 1 to 157)
  AUTHORS   Sorensen,K.I. and Hove-Jensen,B.
  TITLE     Ribose catabolism of Escherichia coli: characterization of the rpiB
            gene encoding ribose phosphate isomerase B and of the rpiR gene,
            which is involved in regulation of rpiB expression
  JOURNAL   J Bacteriol 178 (4), 1003-1011 (1996)
   PUBMED   8576032
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10002173
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Suipraeoptans intestinalis"
                     /db_xref="taxon:2606628"
     Protein         1..157
                     /product="RpiB/LacA/LacB family sugar-phosphate isomerase"
                     /EC_number="5.3.1.-"
                     /GO_function="GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=16956
     Region          1..125
                     /region_name="RpiB"
                     /note="Ribose 5-phosphate isomerase RpiB [Carbohydrate
                     transport and metabolism]; COG0698"
                     /db_xref="CDD:440462"
ORIGIN      
        1 mkiimgadpc gfalkdaike vlekegyeif dvdpkepilf qdvatavaeg vqtgaydrgi
       61 alcgtgmgvs iicnkhkgvy aalcesvyqa rraktvnntn vlcmggfivg hemgiemaka
      121 wleaehmvgl tpemarmvek eydklvefee kafgvsg
//
LOCUS       WP_235899387              79 aa            linear   BCT 02-MAR-2025
DEFINITION  DapH/DapD/GlmU-related protein [Hallella mizrahii].
ACCESSION   WP_235899387
VERSION     WP_235899387.1
KEYWORDS    RefSeq.
SOURCE      Hallella mizrahii
  ORGANISM  Hallella mizrahii
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Prevotellaceae; Hallella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025953.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14602.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Hallella mizrahii"
                     /db_xref="taxon:2606637"
     Protein         1..79
                     /product="DapH/DapD/GlmU-related protein"
                     /calculated_mol_wt=8326
     Region          <12..70
                     /region_name="LbetaH"
                     /note="Left-handed parallel beta-Helix (LbetaH or LbH)
                     domain: The alignment contains 5 turns, each containing
                     three imperfect tandem repeats of a hexapeptide repeat
                     motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing
                     hexapeptide repeats are often enzymes...; cl00160"
                     /db_xref="CDD:469633"
     Site            order(26,28..29,34,46,52)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:100040"
ORIGIN      
        1 mtdlkmqpsk rdlyikgpvv iednvwigdk asihsgvtig kgtivacnav vtkdvppysv
       61 vagvpakvik syissleek
//
LOCUS       WP_235899394             324 aa            linear   BCT 02-MAR-2025
DEFINITION  BT_3987 domain-containing protein [Hallella mizrahii].
ACCESSION   WP_235899394
VERSION     WP_235899394.1
KEYWORDS    RefSeq.
SOURCE      Hallella mizrahii
  ORGANISM  Hallella mizrahii
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Prevotellaceae; Hallella.
REFERENCE   1  (residues 1 to 324)
  AUTHORS   Li,M., Li,S., Guo,X., Guo,C., Wang,Y., Du,Z., Zhang,Z., Xie,C. and
            Ding,K.
  TITLE     Discrete genetic loci in human gut Bacteroides thetaiotaomicron
            confer pectin metabolism
  JOURNAL   Carbohydr Polym 272, 118534 (2021)
   PUBMED   34420703
REFERENCE   2  (residues 1 to 324)
  AUTHORS   Trastoy,B., Du,J.J., Li,C., Garcia-Alija,M., Klontz,E.H.,
            Roberts,B.R., Donahue,T.C., Wang,L.X., Sundberg,E.J. and
            Guerin,M.E.
  TITLE     GH18 endo-beta-N-acetylglucosaminidases use distinct mechanisms to
            process hybrid-type N-linked glycans
  JOURNAL   J Biol Chem 297 (2), 101011 (2021)
   PUBMED   34324829
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020111.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08522.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Hallella mizrahii"
                     /db_xref="taxon:2606637"
     Protein         1..324
                     /product="BT_3987 domain-containing protein"
                     /calculated_mol_wt=35665
     Region          38..173
                     /region_name="DUF1735"
                     /note="Domain of unknown function (DUF1735); pfam08522"
                     /db_xref="CDD:430052"
     Region          <196..315
                     /region_name="DUF5627"
                     /note="Family of unknown function (DUF5627); pfam18620"
                     /db_xref="CDD:465825"
ORIGIN      
        1 mnktfkmlat lalpltlalg fascengdke fddydyqtvy faqqnpirti tlgeddvfpn
       61 dldnqhecql qvvfggvwkn nknrhvkiav dnslvdnlsf dgingaafan tgkpvmampq
      121 nyyelestdv tipagdvrgk vnvhltdaff adpksaevty vlpvrivsae dsilkgqdyt
      181 lyaityknpy agswivtndg svvtlstlsm sqvayphsev vkvdgkektl dgtvvmtvgn
      241 dgavtfstts qdctvtgsgk wtslgakkdt skkwgdkdrd lfevkytity kytdggqtkt
      301 lvkdydeklv mqtrgnkmqt fstk
//
LOCUS       WP_235899441             251 aa            linear   BCT 02-MAR-2025
DEFINITION  glucosaminidase domain-containing protein [Suipraeoptans
            intestinalis].
ACCESSION   WP_235899441
VERSION     WP_235899441.1
KEYWORDS    RefSeq.
SOURCE      Suipraeoptans intestinalis
  ORGANISM  Suipraeoptans intestinalis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Suipraeoptans.
REFERENCE   1  (residues 1 to 251)
  AUTHORS   Nambu,T., Minamino,T., Macnab,R.M. and Kutsukake,K.
  TITLE     Peptidoglycan-hydrolyzing activity of the FlgJ protein, essential
            for flagellar rod formation in Salmonella typhimurium
  JOURNAL   J Bacteriol 181 (5), 1555-1561 (1999)
   PUBMED   10049388
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013954.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01832.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Suipraeoptans intestinalis"
                     /db_xref="taxon:2606628"
     Protein         1..251
                     /product="glucosaminidase domain-containing protein"
                     /GO_function="GO:0004040 - amidase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=27762
     Region          <2..123
                     /region_name="sporang_Gsm"
                     /note="sporangiospore maturation cell wall hydrolase GsmA;
                     NF038016"
                     /db_xref="CDD:411609"
ORIGIN      
        1 msglayyhkn lfgikgrsgs pyvsgvavmg tqeqaagggm yaiqagfsey ksykdciydr
       61 almittlsyy aacdqyknln dgkytkeqan qyckafassw atsqvyyehn vkimeqynly
      121 qfdnltyeqf lklkeggsgf panvvyngki tekmkqvvai aggnrsafpc tanycaawvs
      181 gvyqaaglgs isgnaidmwn nykytgstdq gnippgavvc ssgwgmmvrf mvmlefiwgm
      241 gwwrtikdil l
//
LOCUS       WP_235899467             194 aa            linear   BCT 02-MAR-2025
DEFINITION  lysoplasmalogenase family protein [Suipraeoptans intestinalis].
ACCESSION   WP_235899467
VERSION     WP_235899467.1
KEYWORDS    RefSeq.
SOURCE      Suipraeoptans intestinalis
  ORGANISM  Suipraeoptans intestinalis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Suipraeoptans.
REFERENCE   1  (residues 1 to 194)
  AUTHORS   Ovchinnikov,S., Kinch,L., Park,H., Liao,Y., Pei,J., Kim,D.E.,
            Kamisetty,H., Grishin,N.V. and Baker,D.
  TITLE     Large-scale determination of previously unsolved protein structures
            using evolutionary information
  JOURNAL   Elife 4, e09248 (2015)
   PUBMED   26335199
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 194)
  AUTHORS   Wu,L.C., Pfeiffer,D.R., Calhoon,E.A., Madiai,F., Marcucci,G.,
            Liu,S. and Jurkowitz,M.S.
  TITLE     Purification, identification, and cloning of lysoplasmalogenase,
            the enzyme that catalyzes hydrolysis of the vinyl ether bond of
            lysoplasmalogen
  JOURNAL   J Biol Chem 286 (28), 24916-24930 (2011)
   PUBMED   21515882
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019559.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07947.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Suipraeoptans intestinalis"
                     /db_xref="taxon:2606628"
     Protein         1..194
                     /product="lysoplasmalogenase family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=21740
     Region          17..191
                     /region_name="YhhN"
                     /note="YhhN family; cl01505"
                     /db_xref="CDD:470224"
ORIGIN      
        1 mffvftglsa sfvssghpgv kfvligllfg mlgdiwldlk vtyahdgkpw lysgfvsfml
       61 ghlfyiiaii risqmnfffv lfslilgill gylaislekv mklqygpykk vsliyvslll
      121 ctsmtaflac fqtnfknttl llfflgslff lasdsilsat yfgtkrkeap awiilnhvty
      181 yaaqyliass llfl
//
LOCUS       WP_235899632             319 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Bullifex porci].
ACCESSION   WP_235899632
VERSION     WP_235899632.1
KEYWORDS    RefSeq.
SOURCE      Bullifex porci
  ORGANISM  Bullifex porci
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Spirochaetales; Spirochaetaceae; Bullifex.
REFERENCE   1  (residues 1 to 319)
  AUTHORS   Vertes,A.A., Inui,M., Kobayashi,M., Kurusu,Y. and Yukawa,H.
  TITLE     Isolation and characterization of IS31831, a transposable element
            from Corynebacterium glutamicum
  JOURNAL   Mol Microbiol 11 (4), 739-746 (1994)
   PUBMED   8196545
REFERENCE   2  (residues 1 to 319)
  AUTHORS   van der Zee,A., Agterberg,C., van Agterveld,M., Peeters,M. and
            Mooi,F.R.
  TITLE     Characterization of IS1001, an insertion sequence element of
            Bordetella parapertussis
  JOURNAL   J Bacteriol 175 (1), 141-147 (1993)
   PUBMED   8093238
REFERENCE   3  (residues 1 to 319)
  AUTHORS   Johansen,E. and Kibenich,A.
  TITLE     Isolation and characterization of IS1165, an insertion sequence of
            Leuconostoc mesenteroides subsp. cremoris and other lactic acid
            bacteria
  JOURNAL   Plasmid 27 (3), 200-206 (1992)
   PUBMED   1325060
REFERENCE   4  (residues 1 to 319)
  AUTHORS   Cirillo,J.D., Barletta,R.G., Bloom,B.R. and Jacobs,W.R. Jr.
  TITLE     A novel transposon trap for mycobacteria: isolation and
            characterization of IS1096
  JOURNAL   J Bacteriol 173 (24), 7772-7780 (1991)
   PUBMED   1660454
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013753.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01610.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Bullifex porci"
                     /db_xref="taxon:2606638"
     Protein         1..319
                     /product="transposase"
                     /calculated_mol_wt=37151
     Region          61..>298
                     /region_name="transpos_ISL3"
                     /note="ISL3 family transposase; NF033550"
                     /db_xref="CDD:468079"
ORIGIN      
        1 midehfqtlf smalgisepw fisditmeqs ekeptrmemh isvnyaegsk fqypgeaeaa
       61 svydthektw hhmnffqyrc yitarvprvk lsngkiktve vpwgrigsvf tlmmegvlls
      121 lmkhmsvssv trevgehdtk lwrvldyhvt ealkdqnfsd itglsvneyr hkghkyitvf
      181 vshpeiiide tgkrkyikep rvlfvtegkd kaaverfvar fkekkgivdn invatsdmih
      241 gfrnavkelf pntittvdkf hvisncetvl dngrrretsc rekrkyekls ktkyiwlkiv
      301 ktlqisnern wknflklnt
//
LOCUS       WP_235899652             168 aa            linear   BCT 02-MAR-2025
DEFINITION  polymorphic toxin-type HINT domain-containing protein
            [Pigmentibacter ruber].
ACCESSION   WP_235899652
VERSION     WP_235899652.1
KEYWORDS    RefSeq.
SOURCE      Pigmentibacter ruber
  ORGANISM  Pigmentibacter ruber
            Bacteria; Pseudomonadati; Bdellovibrionota; Oligoflexia;
            Silvanigrellales; Silvanigrellaceae; Pigmentibacter.
REFERENCE   1  (residues 1 to 168)
  AUTHORS   Zhang,D., Iyer,L.M. and Aravind,L.
  TITLE     A novel immunity system for bacterial nucleic acid degrading toxins
            and its recruitment in various eukaryotic and DNA viral systems
  JOURNAL   Nucleic Acids Res 39 (11), 4532-4552 (2011)
   PUBMED   21306995
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019227.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07591.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Pigmentibacter ruber"
                     /db_xref="taxon:2683196"
     Protein         1..168
                     /product="polymorphic toxin-type HINT domain-containing
                     protein"
                     /calculated_mol_wt=18572
     Region          <1..72
                     /region_name="PT-HINT"
                     /note="Pretoxin HINT domain; pfam07591"
                     /db_xref="CDD:400120"
     Region          74..167
                     /region_name="Ntox24"
                     /note="Bacterial toxin 24; pfam15529"
                     /db_xref="CDD:406077"
ORIGIN      
        1 mtstaehpyy vvgegytpaf lltpgkqlvt tsgsthyvig akfkrqkqmv ynfevedhhn
       61 yfvsndgylv hnacsgvpkk qknappnpap eangaphsii ekpgaqgqyt thfgdgtwkq
      121 yrgsgkdhgd vprpnikeal kfnqnpktge lhlhkptyrk pnpgeypk
//
LOCUS       WP_235899752             221 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6803 family protein [Selenomonas montiformis].
ACCESSION   WP_235899752
VERSION     WP_235899752.1
KEYWORDS    RefSeq.
SOURCE      Selenomonas montiformis
  ORGANISM  Selenomonas montiformis
            Bacteria; Bacillati; Bacillota; Negativicutes; Selenomonadales;
            Selenomonadaceae; Selenomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042810.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20617.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Selenomonas montiformis"
                     /db_xref="taxon:2652285"
     Protein         1..221
                     /product="DUF6803 family protein"
                     /calculated_mol_wt=24896
     Region          1..159
                     /region_name="DUF6803"
                     /note="Family of unknown function (DUF6803); pfam20617"
                     /db_xref="CDD:466766"
ORIGIN      
        1 mmmtnymdll aanspwnlil fmvipvaaae amvaaefyml yrkddstqtw qkiskalgif
       61 sgiyfaavvv yliaavipsl hwrgiideia iffyllgifp lgaitllelg aigrslsere
      121 rmrkhfqfli gflivshiam ifgmanptls gwrpspadmp mnmnhtdmgh mdraysgrwq
      181 ssgasdedwy cppsgaspnr cpgweqdtpr nhhhhnmsre h
//
LOCUS       WP_235899785             323 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR family transcriptional regulator [Tritonibacter aquimaris].
ACCESSION   WP_235899785
VERSION     WP_235899785.1
KEYWORDS    RefSeq.
SOURCE      Tritonibacter aquimaris
  ORGANISM  Tritonibacter aquimaris
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Tritonibacter.
REFERENCE   1  (residues 1 to 323)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012354.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00126.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Tritonibacter aquimaris"
                     /db_xref="taxon:2663379"
     Protein         1..323
                     /product="LysR family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=35532
     Region          26..321
                     /region_name="PRK11139"
                     /note="DNA-binding transcriptional activator GcvA;
                     Provisional"
                     /db_xref="CDD:182990"
ORIGIN      
        1 maivkglltv vticesfmvv yaevmmsvrl ppfsgltafy aavrhgtlsa aaqelnvsqp
       61 avsrriaale qdlgcrlfdr shrpvrltpe grdlaqalra gfgqietave rlrmghdhgv
      121 itvsgpsgfv gswlipklae leqafpelti rlisqeygep erpgdvalrf glpdrdaaqe
      181 vrvlgnevyp vasplylqrq gagrdvscfd gltlltmeha rrhwhdwpsw fetqgqqmpa
      241 kvrlmdfnsy ammvnaalaa hgvclcwsgl lddflssgav vrlgtaqars ergyylslre
      301 glaarpeava vrqwildraq qsv
//
LOCUS       WP_235899813             240 aa            linear   BCT 02-MAR-2025
DEFINITION  DDE-type integrase/transposase/recombinase [Selenomonas
            montiformis].
ACCESSION   WP_235899813
VERSION     WP_235899813.1
KEYWORDS    RefSeq.
SOURCE      Selenomonas montiformis
  ORGANISM  Selenomonas montiformis
            Bacteria; Bacillati; Bacillota; Negativicutes; Selenomonadales;
            Selenomonadaceae; Selenomonas.
REFERENCE   1  (residues 1 to 240)
  AUTHORS   Dyda,F., Hickman,A.B., Jenkins,T.M., Engelman,A., Craigie,R. and
            Davies,D.R.
  TITLE     Crystal structure of the catalytic domain of HIV-1 integrase:
            similarity to other polynucleotidyl transferases
  JOURNAL   Science 266 (5193), 1981-1986 (1994)
   PUBMED   7801124
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012870.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00665.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Selenomonas montiformis"
                     /db_xref="taxon:2652285"
     Protein         1..240
                     /product="DDE-type integrase/transposase/recombinase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=27720
     Region          <1..231
                     /region_name="transpos_IS3"
                     /note="IS3 family transposase; NF033516"
                     /db_xref="CDD:468052"
ORIGIN      
        1 melsreipvk llcktmgiqr ssfyawkkhl sqpsgkekrl lsnvllfqey hwkypshgyr
       61 wlnakirldk eivlsdpyah kccriagiks kskhyrykka gdparifpnl lmsemqidgp
      121 mqcivsdmta fyvkgiyhel tlymdlwnne ivshslsakr gdrmtyisgl enliewqkrh
      181 pehqmvlhsd qgsvyaskay nellpmygit rsmsragtpt dnaamesing srrscswtcm
//
LOCUS       WP_235899856             400 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Selenomonas montiformis].
ACCESSION   WP_235899856
VERSION     WP_235899856.1
KEYWORDS    RefSeq.
SOURCE      Selenomonas montiformis
  ORGANISM  Selenomonas montiformis
            Bacteria; Bacillati; Bacillota; Negativicutes; Selenomonadales;
            Selenomonadaceae; Selenomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Selenomonas montiformis"
                     /db_xref="taxon:2652285"
     Protein         1..400
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=42199
     Region          16..386
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(28..29,32..33,36,68,118..119,121..123,126,146,
                     149..150,153,221,224..225,228..230,233,261,265,314..315,
                     319,323,339,342..343,346..347,350)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340882"
ORIGIN      
        1 mrgasflpsi plkyvlplmg ltlsafvfnt sefmpigllt diaqsfamtp aeagvmitvy
       61 awmvgllslp lmliacrmdl rrlllltlal ftigqagagl aasfpallaa riavacahsv
      121 fwsiaaplat rlvtrehqpf alslvaagss vamvfglplg rvvglalgwr ttffciaais
      181 fltlvylcrv fpplpqgerf spaqlpslvr qpliagifll sllyatayft aysyiepfls
      241 ttahfapsli tvtlmvlgvm gfcgsflfsh cygrcrfgvl raglaglmas lalllpasas
      301 lpltfltcmv lgtistcfnl amqaeiirht trasspvama ifsgifnvgi gsgtflggra
      361 saagllayvg ffgaaiaaaa avylclvyip qakkrerdga
//
LOCUS       WP_235899890              96 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding enzyme [Selenomonas montiformis].
ACCESSION   WP_235899890
VERSION     WP_235899890.1
KEYWORDS    RefSeq.
SOURCE      Selenomonas montiformis
  ORGANISM  Selenomonas montiformis
            Bacteria; Bacillati; Bacillota; Negativicutes; Selenomonadales;
            Selenomonadaceae; Selenomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024591.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13193.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Selenomonas montiformis"
                     /db_xref="taxon:2652285"
     Protein         1..96
                     /product="AMP-binding enzyme"
                     /calculated_mol_wt=10879
     Region          <2..82
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
ORIGIN      
        1 mevesklyqc sgveqaivrp fadeeglsym iayivpkknd lkvsqvrrel aenlmpfmip
       61 efivkmpqip lnsngkpdmt rmpvvmkegk nyeaid
//
LOCUS       WP_235899964             715 aa            linear   BCT 02-MAR-2025
DEFINITION  dynamin family protein [Tritonibacter aquimaris].
ACCESSION   WP_235899964
VERSION     WP_235899964.1
KEYWORDS    RefSeq.
SOURCE      Tritonibacter aquimaris
  ORGANISM  Tritonibacter aquimaris
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Tritonibacter.
REFERENCE   1  (residues 1 to 715)
  AUTHORS   Warnock,D.E. and Schmid,S.L.
  TITLE     Dynamin GTPase, a force-generating molecular switch
  JOURNAL   Bioessays 18 (11), 885-893 (1996)
   PUBMED   8939066
REFERENCE   2  (residues 1 to 715)
  AUTHORS   Obar,R.A., Collins,C.A., Hammarback,J.A., Shpetner,H.S. and
            Vallee,R.B.
  TITLE     Molecular cloning of the microtubule-associated mechanochemical
            enzyme dynamin reveals homology with a new family of GTP-binding
            proteins
  JOURNAL   Nature 347 (6290), 256-261 (1990)
   PUBMED   2144893
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012570.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00350.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Tritonibacter aquimaris"
                     /db_xref="taxon:2663379"
     Protein         1..715
                     /product="dynamin family protein"
                     /calculated_mol_wt=78612
     Region          57..>116
                     /region_name="YeeP"
                     /note="Predicted GTPase [General function prediction
                     only]; COG3596"
                     /db_xref="CDD:442815"
     Region          97..>143
                     /region_name="Dynamin_N"
                     /note="Dynamin family; pfam00350"
                     /db_xref="CDD:459775"
     Region          <264..390
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            268..271
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206739"
     Site            order(270..271,291..292)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206739"
     Site            327..330
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206739"
     Site            order(365,369..370)
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206739"
ORIGIN      
        1 mtatspmnap qqtdglthma pssppppvqa setapadira strpsnlslg faqlsqlnte
       61 rlrlrealet lkqdagsgas rsltrlqrel defepaitvl gqvksgktsl vnamtgwsdm
      121 lpcdvnpwts vvtslhlspq dsampkstra rfqfmteaew drlltkggri gemagragae
      181 selqkirqqi dmmrerscrr lgaafeqlmg qahdydyfdk nlienyiclg ddfededglk
      241 sgryaditrs adlhlnsaii phplclrdtp gvndtfmmre qitiqavrds ricvvtlsag
      301 qalnsvdlgl irmisslear dvvifvnrid elsnpieqvp eieasiretl ashqgpdeav
      361 ilfgsalwan aalmgrldrl ppassaslln waeacvrsgr qhmakgpaqd mvwqlsglpd
      421 lhaalgeria tklgkpllsr iaqsgltvas graaaqnirv qasdpaatgt adqlssqkgf
      481 delvsarmhq leqaldevle afktradrah atfidratha lvehlerrge dtvweydpag
      541 lrlllrsahs vmsakaktva qaqyeaavrd vaellyrrfg aavegvqlav prvpdvappv
      601 slgqtialdf ndgwwarwwr rtrgydsfad rfrkliaget edfmeqlksv qvaqmrsefi
      661 srlqgffdeq rdilaeisda rggdlhatft dqvtqerqaa sraaletlqk cagsq
//
LOCUS       WP_235899984            1252 aa            linear   BCT 02-MAR-2025
DEFINITION  PEP/pyruvate-binding domain-containing protein [Tritonibacter
            aquimaris].
ACCESSION   WP_235899984
VERSION     WP_235899984.1
KEYWORDS    RefSeq.
SOURCE      Tritonibacter aquimaris
  ORGANISM  Tritonibacter aquimaris
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Tritonibacter.
REFERENCE   1  (residues 1 to 1252)
  AUTHORS   Lim,K., Read,R.J., Chen,C.C., Tempczyk,A., Wei,M., Ye,D., Wu,C.,
            Dunaway-Mariano,D. and Herzberg,O.
  TITLE     Swiveling domain mechanism in pyruvate phosphate dikinase
  JOURNAL   Biochemistry 46 (51), 14845-14853 (2007)
   PUBMED   18052212
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01326.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Tritonibacter aquimaris"
                     /db_xref="taxon:2663379"
     Protein         1..1252
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0016310 - phosphorylation [Evidence IEA]"
                     /calculated_mol_wt=136781
     Region          73..153
                     /region_name="PspE"
                     /note="Rhodanese-related sulfurtransferase [Inorganic ion
                     transport and metabolism]; COG0607"
                     /db_xref="CDD:440372"
     Region          179..>263
                     /region_name="PspE"
                     /note="Rhodanese-related sulfurtransferase [Inorganic ion
                     transport and metabolism]; COG0607"
                     /db_xref="CDD:440372"
     Region          318..490
                     /region_name="PRK00145"
                     /note="putative inner membrane protein translocase
                     component YidC; Provisional; cl00489"
                     /db_xref="CDD:469790"
     Region          522..1210
                     /region_name="PRK06241"
                     /note="phosphoenolpyruvate synthase; Validated"
                     /db_xref="CDD:235751"
ORIGIN      
        1 mlavlalvig nywqysnakt qnqqrlqatl lrpaqfagte ikdeslkets ynaqlehpqg
       61 istaeaaall aagntrffdv retgeremgt lpgsehvrfp dfrqsvpvap geqvvlfchn
      121 gnrssetcae laklgidcrf itgglekwiv egrtfsdetv rslsdlrslp eypnkdrlln
      181 taeftdlyna gdlqiidtry pgdfasghlp gavnipiram tstdlqasid klqkkptvaa
      241 cydrrscfmg qalglelsrq gidfqgrytl pwefyvpskp kahvkewlad qnqglwdkai
      301 aalaaalvws hnnahiligl falslvtrll vlpialkser dqlitaatkd elkelkarls
      361 adpvrkarai qafyadkglt pmrnmlalaf lpimmlgvsa agqaaqalav pflwakdiga
      421 adpyyitpiv ftalagvyll waiaktrrqk mlwmglglpi ifamvvglnf aanaylcfsl
      481 tlllaqrayv vgmwnnatks akartralaa pklpqnvhal ndtaalseag nkalrlsvlk
      541 naglpvpngv vvkgpaldhl aqlpeqgkea fartiwkemg ekpsavrssa snedgadqsf
      601 agvfdsvldv tgdsmlsaln hvhesftsar sqsyekdgdi gqanvlvqem vdaeiagvlf
      661 tqdplapgmt miewvegnge alvsgrvtpk varfgrfsgq mvsdaegdlp dfsalldmgr
      721 qietlfdtpq dvewayengq frilqsrdit tlslgtaeqk qrsaewrdil grfgecdpde
      781 vvleqdemse vlprptplsf dlmthvwapg gsldqacral svpyklkeep gshlvnlfgk
      841 tfvdrkiksy malalsasqa kqlrkraspy lkqfkteilp nfhtelaywq aldytalpra
      901 ellktitklr defvqdiyve aekinilasf tmseaqaata gdtslrsyll qaetphapas
      961 mlarckgdkk aalavmghrs mfdyelsapr yaeapsllqn llqspissmh gtpalpkdvp
     1021 aelqdtldla lafqdlkeqa khealrllae lrqalvalgq qtgledllff ltldeildad
     1081 wneneqltdl ttarkskeel rrklspsevs itlrdiells lgaaatagdg slggtcvagg
     1141 gtvtgrvfiv sddfaddgsd vdtlfqgfre gdimvckmih pawlpqvlsa gavisevggw
     1201 lshmsivare knklmlvsck glrslypgql vtvaedgsiq aedaktpavq ia
//
LOCUS       WP_235900058             387 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Tritonibacter aquimaris].
ACCESSION   WP_235900058
VERSION     WP_235900058.1
KEYWORDS    RefSeq.
SOURCE      Tritonibacter aquimaris
  ORGANISM  Tritonibacter aquimaris
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Tritonibacter.
REFERENCE   1  (residues 1 to 387)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Tritonibacter aquimaris"
                     /db_xref="taxon:2663379"
     Protein         1..387
                     /product="AMP-binding protein"
                     /calculated_mol_wt=40948
     Region          <63..385
                     /region_name="PRK07638"
                     /note="acyl-CoA synthetase; Validated"
                     /db_xref="CDD:236071"
ORIGIN      
        1 mkmtaqrevf hiaakakllt pqadgadqll kalgsglslr asplaktpli atqsavqvvm
       61 cessgstgap klirrtpssw rasfeinkal lgvtpddtya vlghlghsis lyaatealhi
      121 gadlailsgh tpaqqasalr eheasllyat psqlrlliaa dgavfpkitr licgggalga
      181 glqarlpdqf paarvieffg asetsfisms daatpdksvg kaypgvdihi dapldevgei
      241 wvkspylfag yeegdspltr wkggylaige mglldadgyl ylrgrrsrmv tvadqnvfpe
      301 aiesclmaqp gvsaaavipv adplrghhiv avvqgvadet alrqacratl gaaaaprsfw
      361 yrdnipllpa gkpdlkllqr lwqerna
//
LOCUS       WP_235900081             339 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerophosphodiester phosphodiesterase family protein
            [Pontixanthobacter aestiaquae].
ACCESSION   WP_235900081
VERSION     WP_235900081.1
KEYWORDS    RefSeq.
SOURCE      Pontixanthobacter aestiaquae
  ORGANISM  Pontixanthobacter aestiaquae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Pontixanthobacter.
REFERENCE   1  (residues 1 to 339)
  AUTHORS   Kim,H. and Farrand,S.K.
  TITLE     Characterization of the acc operon from the nopaline-type Ti
            plasmid pTiC58, which encodes utilization of agrocinopines A and B
            and susceptibility to agrocin 84
  JOURNAL   J Bacteriol 179 (23), 7559-7572 (1997)
   PUBMED   9393724
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03009.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Pontixanthobacter aestiaquae"
                     /db_xref="taxon:1509367"
     Protein         1..339
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /GO_function="GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=37437
     Region          15..325
                     /region_name="PI-PLCc_GDPD_SF"
                     /note="Catalytic domain of phosphoinositide-specific
                     phospholipase C-like phosphodiesterases superfamily;
                     cl14615"
                     /db_xref="CDD:472694"
     Site            order(19,46,48,155,195,280)
                     /site_type="active"
                     /db_xref="CDD:176544"
     Site            order(19,61)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176544"
ORIGIN      
        1 mttpafaqdv dndlliiahr gasgerpeht laayeraidq gadyvepdlv vskdgvlisr
       61 heneisgttd vesrdefadr rrsktidgql iagwfaedft laelrtlrak erlphirpen
      121 srfdglyqvp tfeeivalvk akeaelgkri glypelkhpn fllqdegids vdllvralkk
      181 agytkasdpi fiqcfevgpl qrldqltdvr lvqlihpehe spadepsmry vematptgla
      241 eiaryadgvg phfsfvlndd gsakpfvada haldlkvhpw tlrrentfmp salrtndnpr
      301 gvgalpilmg llvaadvdgi ftdhpgaavi lresgsyep
//
LOCUS       WP_235900192             282 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Pontixanthobacter aestiaquae].
ACCESSION   WP_235900192
VERSION     WP_235900192.1
KEYWORDS    RefSeq.
SOURCE      Pontixanthobacter aestiaquae
  ORGANISM  Pontixanthobacter aestiaquae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Pontixanthobacter.
REFERENCE   1  (residues 1 to 282)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Pontixanthobacter aestiaquae"
                     /db_xref="taxon:1509367"
     Protein         1..282
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=30310
     Region          35..270
                     /region_name="PHA_depoly_arom"
                     /note="poly(3-hydroxyalkanoate) depolymerase; TIGR02240"
                     /db_xref="CDD:131294"
ORIGIN      
        1 msdpmasaei sienvggrnl riarwrldep sdhppvlffn giganieava plaeamndra
       61 fimfdmpgtg gspdpvipyt ivtmawtatq vldrfglgvv dvmgiswggg maqhfaiqhp
      121 artrrlvlia tsagmlmipg npaaltkman prryvdadym aqhfetlygg aldgtkgkgg
      181 hmsrltppsp rgymyqllam lgwtsapvlp fmrketlilm gdddqivpla ngkflntlip
      241 nselivmegg ghlfllshkd esvsaitdfl dapdetelsa aa
//
LOCUS       WP_235900301             191 aa            linear   BCT 02-MAR-2025
DEFINITION  lysoplasmalogenase family protein [Pontixanthobacter aestiaquae].
ACCESSION   WP_235900301
VERSION     WP_235900301.1
KEYWORDS    RefSeq.
SOURCE      Pontixanthobacter aestiaquae
  ORGANISM  Pontixanthobacter aestiaquae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Pontixanthobacter.
REFERENCE   1  (residues 1 to 191)
  AUTHORS   Ovchinnikov,S., Kinch,L., Park,H., Liao,Y., Pei,J., Kim,D.E.,
            Kamisetty,H., Grishin,N.V. and Baker,D.
  TITLE     Large-scale determination of previously unsolved protein structures
            using evolutionary information
  JOURNAL   Elife 4, e09248 (2015)
   PUBMED   26335199
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 191)
  AUTHORS   Wu,L.C., Pfeiffer,D.R., Calhoon,E.A., Madiai,F., Marcucci,G.,
            Liu,S. and Jurkowitz,M.S.
  TITLE     Purification, identification, and cloning of lysoplasmalogenase,
            the enzyme that catalyzes hydrolysis of the vinyl ether bond of
            lysoplasmalogen
  JOURNAL   J Biol Chem 286 (28), 24916-24930 (2011)
   PUBMED   21515882
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019559.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07947.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Pontixanthobacter aestiaquae"
                     /db_xref="taxon:1509367"
     Protein         1..191
                     /product="lysoplasmalogenase family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=20662
     Region          11..179
                     /region_name="YhhN"
                     /note="YhhN family; cl01505"
                     /db_xref="CDD:470224"
ORIGIN      
        1 mdspygeiwl illkgagvaf lavyallrhp sstakllalv lalsamgdml ielslqwgga
       61 afffshvaai slylanpras stpsqkglav allfltplic wlltrdisia syglalggma
      121 atawmsrftr yrvglgavlf visdwlifyg igerpyaeta smlvwpiyya aqfliatgvi
      181 qtlrhelrdv a
//
LOCUS       WP_235900430             370 aa            linear   BCT 02-MAR-2025
DEFINITION  lycopene cyclase family protein [Lolliginicoccus suaedae].
ACCESSION   WP_235900430
VERSION     WP_235900430.1
KEYWORDS    RefSeq.
SOURCE      Lolliginicoccus suaedae
  ORGANISM  Lolliginicoccus suaedae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Hoyosellaceae; Lolliginicoccus.
REFERENCE   1  (residues 1 to 370)
  AUTHORS   Cunningham,F.X. Jr. and Gantt,E.
  TITLE     One ring or two? Determination of ring number in carotenoids by
            lycopene epsilon-cyclases
  JOURNAL   Proc Natl Acad Sci U S A 98 (5), 2905-2910 (2001)
   PUBMED   11226339
REFERENCE   2  (residues 1 to 370)
  AUTHORS   Cunningham,F.X. Jr., Pogson,B., Sun,Z., McDonald,K.A.,
            DellaPenna,D. and Gantt,E.
  TITLE     Functional analysis of the beta and epsilon lycopene cyclase
            enzymes of Arabidopsis reveals a mechanism for control of cyclic
            carotenoid formation
  JOURNAL   Plant Cell 8 (9), 1613-1626 (1996)
   PUBMED   8837512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017634.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05834.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Lolliginicoccus suaedae"
                     /db_xref="taxon:2605429"
     Protein         1..370
                     /product="lycopene cyclase family protein"
                     /calculated_mol_wt=38903
     Region          4..363
                     /region_name="carotene-cycl"
                     /note="lycopene cyclase family protein; TIGR01790"
                     /db_xref="CDD:130850"
ORIGIN      
        1 miadilvagl gpagralahr atvaglsvva idknpkrawt atygawldel ppwlpgatia
       61 arapqpvawg hrrhtidrty vvldtpalqr hlslgnatvv qgsieqldpg gtrlasgehl
      121 rarlvvdarg iprsprsaeq taygvlvpaa tarilldgas alfmdwrapr rsggvtpsfl
      181 yavpvgggrw lleetclagr palgigelrq rlhdrlagrg idldgtepte tvrfplrppr
      241 gfvpagvlgf gargglghpa tgysvaasmr aadavaaavl qrsdparalh swrsravsal
      301 rakglaslla lppsevagff dvffelppaq qraylsgred lagltaamta lfarvpsstr
      361 arlarsvltg
//
LOCUS       WP_235900470             595 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Lolliginicoccus suaedae].
ACCESSION   WP_235900470
VERSION     WP_235900470.1
KEYWORDS    RefSeq.
SOURCE      Lolliginicoccus suaedae
  ORGANISM  Lolliginicoccus suaedae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Hoyosellaceae; Lolliginicoccus.
REFERENCE   1  (residues 1 to 595)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 595)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 595)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 595)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Lolliginicoccus suaedae"
                     /db_xref="taxon:2605429"
     Protein         1..595
                     /product="ATP-binding protein"
                     /calculated_mol_wt=61637
     Region          <10..595
                     /region_name="PRK10490"
                     /note="sensor protein KdpD; Provisional"
                     /db_xref="CDD:236701"
     Region          360..589
                     /region_name="KdpD"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; COG2205"
                     /db_xref="CDD:441807"
ORIGIN      
        1 midqgaalad rvlvavsgng daealvehaa rsaercgadl lvahvldprt qgtppeaves
       61 mrehaaraga sfhtvvagda agavlelarg agatriivgy pagargrspa rrgitttiar
      121 hagaidvqiv atppserpph apgrgpalgr grnraawaaa ilvpvlltag fvpfkarlel
      181 gdvamtfllg tvavallgaw rpaltavals alllnvfyte pfhtpyiadp hnrftlavma
      241 vvaaavaiiv hrsasrarea aharteaalm ssyartilld dnpadtllar iredfglssv
      301 elrekpapap sphgqeipid attalvldgp eldearrsml asagvqavla lrhqemtsta
      361 aearrqsdaa alrtallsal ghdlrtplta ltmaigtlqd dtlaitaadr rellsvades
      421 trqlrdlvdn lldssrlatg avrplirphg iddvtvrala svrggnaval rfpddlpgvl
      481 adagllervl anladnalrh ggapvsiear pidgrvslai idhgpglspa araqlfepfq
      541 rhgdrdrttg iglgmsvakg fitamggtie asdtpggglt vtvalpaatg pearp
//
LOCUS       WP_235900524             307 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5995 family protein [Lolliginicoccus suaedae].
ACCESSION   WP_235900524
VERSION     WP_235900524.1
KEYWORDS    RefSeq.
SOURCE      Lolliginicoccus suaedae
  ORGANISM  Lolliginicoccus suaedae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Hoyosellaceae; Lolliginicoccus.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Heinzelmann,E., Berger,S., Muller,C., Hartner,T., Poralla,K.,
            Wohlleben,W. and Schwartz,D.
  TITLE     An acyl-CoA dehydrogenase is involved in the formation of the Delta
            cis3 double bond in the acyl residue of the lipopeptide antibiotic
            friulimicin in Actinoplanes friuliensis
  JOURNAL   Microbiology (Reading) 151 (Pt 6), 1963-1974 (2005)
   PUBMED   15942003
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039623.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19458.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Lolliginicoccus suaedae"
                     /db_xref="taxon:2605429"
     Protein         1..307
                     /product="DUF5995 family protein"
                     /calculated_mol_wt=31537
     Region          77..>247
                     /region_name="DUF5995"
                     /note="Family of unknown function (DUF5995); pfam19458"
                     /db_xref="CDD:466095"
ORIGIN      
        1 mnpaprslaa laiagsllag aapalaqapa igtlpsasvg tvtpqgagpc vsptndtvla
       61 eladpaaiag dsplerleda aarhsriaav lesqgdrrgl fsvgldaveq gavlpmqrdg
      121 qfvdpewane lsldllvryl gnlharvtgg vvepqwarff dlaedcsvsp araamagyna
      181 hltvdlarsv aaagtrdahv pdffrivdai alrgdliidr trsaygadlg plwrgyvvgp
      241 aldsivgegv gttallrfad vgynsltlah glalqepmla adaelritgl wqvaddvlag
      301 lsvvggl
//
LOCUS       WP_235900539             376 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Lolliginicoccus
            suaedae].
ACCESSION   WP_235900539
VERSION     WP_235900539.1
KEYWORDS    RefSeq.
SOURCE      Lolliginicoccus suaedae
  ORGANISM  Lolliginicoccus suaedae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Hoyosellaceae; Lolliginicoccus.
REFERENCE   1  (residues 1 to 376)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 376)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Lolliginicoccus suaedae"
                     /db_xref="taxon:2605429"
     Protein         1..376
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=39868
     Region          <50..376
                     /region_name="PRK07201"
                     /note="SDR family oxidoreductase"
                     /db_xref="CDD:235962"
ORIGIN      
        1 matlapatfl aftqpadllv qtlatparda fapvaraprq aaaamsstlr srrpsttkpl
       61 ndrrivitga ssgigaaaah qiaanggtvl lvarsldkll evkqsietdg gtafaypcdi
      121 tdgdavdrli dqivhdhgti dmlvnnagrs irrsvalshd rfhdfertms lnyfaairli
      181 lgllphmkan afghivniss igvqtsaprf sayvaskaal dafsdvvate tlgsgvtftt
      241 ihmplvrtpm iapttmydaf ptlspdeaas lvvravvkrp veigtpvgtf gelmhalapk
      301 ltdrilhqay kafpdslaaq gehtpgekpq gentkstgpg lsrrtlllar asrlartqpl
      361 sgtatammrl lpgihw
//
LOCUS       WP_235900596             436 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4185 domain-containing protein [Lolliginicoccus suaedae].
ACCESSION   WP_235900596
VERSION     WP_235900596.1
KEYWORDS    RefSeq.
SOURCE      Lolliginicoccus suaedae
  ORGANISM  Lolliginicoccus suaedae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Hoyosellaceae; Lolliginicoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025182.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13810.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Lolliginicoccus suaedae"
                     /db_xref="taxon:2605429"
     Protein         1..436
                     /product="DUF4185 domain-containing protein"
                     /calculated_mol_wt=46570
     Region          92..421
                     /region_name="DUF4185"
                     /note="Domain of unknown function (DUF4185); pfam13810"
                     /db_xref="CDD:433495"
ORIGIN      
        1 mrtskavslg lalaigaglq avspmsamae pcgssggani esdedravmg tplgrkpita
       61 dgpvgvepls drvgariasp arlvqwltgp rsanqtssrf sisgtdlgim wdnggtgaer
      121 qvlfaygdtf gdcskpdqew ryntlmrtsd talgdgldip dplteeeddh lyggspvtvd
      181 kpgfakqiid klglapeeft viptagiavd gvqyinfmsv kqwgppsrwt tnfsaiavse
      241 dngenwevdv atirentegd ldgieliegn qnfqmtayak rdgyvytfgt psgrfgaarv
      301 arvaeadild laeyeywdgd awtsgdpgaa anvfpapvse msvawnehlg kfialytndv
      361 gsvvirtasq pqgpwsapea imtaqafpgg lyapyihpws sgdqlyfavs lwseynvmlm
      421 rttlntdppp apswgs
//
LOCUS       WP_235900602             105 aa            linear   BCT 02-MAR-2025
DEFINITION  DoxX family protein [Lolliginicoccus suaedae].
ACCESSION   WP_235900602
VERSION     WP_235900602.1
KEYWORDS    RefSeq.
SOURCE      Lolliginicoccus suaedae
  ORGANISM  Lolliginicoccus suaedae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Hoyosellaceae; Lolliginicoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024953.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13564.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Lolliginicoccus suaedae"
                     /db_xref="taxon:2605429"
     Protein         1..105
                     /product="DoxX family protein"
                     /calculated_mol_wt=10638
ORIGIN      
        1 mtktstpyea yrarpraawa sdfspkavra igileilgal glvlpqatgi yplitplaaa
       61 glaallalag lvlhrrgelg palpyvgtll vlaivvaigr laata
//
LOCUS       WP_235900647             160 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5130 family protein [Lolliginicoccus suaedae].
ACCESSION   WP_235900647
VERSION     WP_235900647.1
KEYWORDS    RefSeq.
SOURCE      Lolliginicoccus suaedae
  ORGANISM  Lolliginicoccus suaedae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Hoyosellaceae; Lolliginicoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028483.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17174.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Lolliginicoccus suaedae"
                     /db_xref="taxon:2605429"
     Protein         1..160
                     /product="DUF5130 family protein"
                     /calculated_mol_wt=16884
     Region          17..147
                     /region_name="DUF5130"
                     /note="Domain of unknown function (DUF5130); pfam17174"
                     /db_xref="CDD:435766"
ORIGIN      
        1 mqhgeivvps appledlpmg svqtasgrvs avrfldepvd klgfdsehri rldealirat
       61 rdtgikftiy lgelgpdsnd kafelldsld daahsaliav apgerrieiv sgpavahrvt
      121 dricqlgita alpllregdl ldglvaavkv maaatspvrs
//
LOCUS       WP_235900832              51 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4261 domain-containing protein [Inconstantimicrobium porci].
ACCESSION   WP_235900832
VERSION     WP_235900832.1
KEYWORDS    RefSeq.
SOURCE      Inconstantimicrobium porci
  ORGANISM  Inconstantimicrobium porci
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Inconstantimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025446.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14080.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..51
                     /organism="Inconstantimicrobium porci"
                     /db_xref="taxon:2652291"
     Protein         1..51
                     /product="DUF4261 domain-containing protein"
                     /calculated_mol_wt=6050
     Region          1..>40
                     /region_name="DUF4261"
                     /note="Domain of unknown function (DUF4261); cl46310"
                     /db_xref="CDD:480650"
ORIGIN      
        1 mstlylpdvq yhfhgvdpnw vvnhaynlls yiydnnsrfh ktcrsnykta w
//
LOCUS       WP_235900857             627 aa            linear   BCT 02-MAR-2025
DEFINITION  6-pyruvoyl-tetrahydropterin synthase-related protein
            [Inconstantimicrobium porci].
ACCESSION   WP_235900857
VERSION     WP_235900857.1
KEYWORDS    RefSeq.
SOURCE      Inconstantimicrobium porci
  ORGANISM  Inconstantimicrobium porci
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Inconstantimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021635.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10131.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Inconstantimicrobium porci"
                     /db_xref="taxon:2652291"
     Protein         1..627
                     /product="6-pyruvoyl-tetrahydropterin synthase-related
                     protein"
                     /calculated_mol_wt=71705
     Region          1..504
                     /region_name="PMT_2"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; cl21590"
                     /db_xref="CDD:473917"
ORIGIN      
        1 miaamigigt flfcliysla nkeykysvyt ilsmalcfai mgielvpgli ggmasmdsea
       61 aianmagwse kasislnpfl rikgemdlyy fgasilftaf lgfllcskei nagfiaaali
      121 ffgttkafvp ivkllplkqa fwmerftpia ycllfislmm wkkskkifiy flviliamdc
      181 ipslkffefd kdkivtaqqg vinneqryll kegraitenr falmdlstyg afpsyimsen
      241 yddavkyvfg wahwgsstlp nivmintafe kgyyeymfdr llelgsdtvl ikknllkekd
      301 fkklndsaak lnyslvlene ngylyklgyh gtfgtissyn niaigstsdy isfiypdfkk
      361 gksinindys yeelknykri ylsgftysnr neaekmidkl grsgvmiyid mngvpvnrtt
      421 girsflgida fditfsrhyp eitykgrnii pkrfegenae wntvylgnlk nvysyadfng
      481 kkldcigtge nqniyfigfn llyhdietfd dsiryiiddi fecdgsilpk relvrldvdy
      541 kkdeiiinsy ydnvntniaf qdnfrslkni ktdnnliivd kgttklrivy syfktglivt
      601 vigiileivv lilfikdntn deceekf
//
LOCUS       WP_235900697             362 aa            linear   BCT 02-MAR-2025
DEFINITION  GmrSD restriction endonuclease domain-containing protein
            [Lolliginicoccus suaedae].
ACCESSION   WP_235900697
VERSION     WP_235900697.1
KEYWORDS    RefSeq.
SOURCE      Lolliginicoccus suaedae
  ORGANISM  Lolliginicoccus suaedae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Hoyosellaceae; Lolliginicoccus.
REFERENCE   1  (residues 1 to 362)
  AUTHORS   Gao,H., Gong,X., Zhou,J., Zhang,Y., Duan,J., Wei,Y., Chen,L.,
            Deng,Z., Wang,J., Chen,S., Wu,G. and Wang,L.
  TITLE     Nicking mechanism underlying the DNA phosphorothioate-sensing
            antiphage defense by SspE
  JOURNAL   Nat Commun 13 (1), 6773 (2022)
   PUBMED   36351933
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 362)
  AUTHORS   Machnicka,M.A., Kaminska,K.H., Dunin-Horkawicz,S. and Bujnicki,J.M.
  TITLE     Phylogenomics and sequence-structure-function relationships in the
            GmrSD family of Type IV restriction enzymes
  JOURNAL   BMC Bioinformatics 16, 336 (2015)
   PUBMED   26493560
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019151.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07510.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Lolliginicoccus suaedae"
                     /db_xref="taxon:2605429"
     Protein         1..362
                     /product="GmrSD restriction endonuclease domain-containing
                     protein"
                     /calculated_mol_wt=38211
     Region          121..260
                     /region_name="DUF1524"
                     /note="Protein of unknown function (DUF1524); pfam07510"
                     /db_xref="CDD:462188"
     Region          <259..336
                     /region_name="Trypan_PARP"
                     /note="Procyclic acidic repetitive protein (PARP);
                     pfam05887"
                     /db_xref="CDD:368653"
     Region          326..361
                     /region_name="Excalibur"
                     /note="Excalibur calcium-binding domain; pfam05901"
                     /db_xref="CDD:428664"
ORIGIN      
        1 mprastmvgi gaavlfvggl vitptveegp gsaaventqa qapttsaqpq ataapdeaqe
       61 ssrdngfnip ddasdelrra yqqlaslevk grapktgydr dlfgsawtdd vrveagrngc
      121 dtrndilrrd lddivikyns ngcvaqsgal dgpytgqais fgrggdtsdv qidhvvalsd
      181 awqkgaqqws patrqdfand prnllavdag anmeksdgda atwlpankaf rctmvamqvn
      241 vkanyglwvt qserdaierv ldscagidfp gpvpgmmrdr eseppapvrt pepeperapa
      301 pepvytpape pvytpppasa pasvyysscs avkaagaapi rigdagysrk ldrdgdgiac
      361 en
//
LOCUS       WP_235900948             286 aa            linear   BCT 02-MAR-2025
DEFINITION  putative manganese transporter [Floccifex porci].
ACCESSION   WP_235900948
VERSION     WP_235900948.1
KEYWORDS    RefSeq.
SOURCE      Floccifex porci
  ORGANISM  Floccifex porci
            Bacteria; Bacillati; Bacillota; Erysipelotrichia;
            Erysipelotrichales; Erysipelotrichaceae; Floccifex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022889.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11449.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Floccifex porci"
                     /db_xref="taxon:2606629"
     Protein         1..286
                     /product="putative manganese transporter"
                     /calculated_mol_wt=31854
     Region          10..280
                     /region_name="ArsP_2"
                     /note="Putative, 10TM heavy-metal exporter; cl12973"
                     /db_xref="CDD:472398"
ORIGIN      
        1 meifleiihd twimlpllyi tycileifer ketsddsmfy slqkygplfg ailglipqcg
       61 fsilasmlfl qknitmgtli avmiatsdea ipvllsnpsl fssliklilc kfviavtvgy
      121 ivdfilvrkq kiirfetmee eedyeeddts nacpccytqy plyisalirs lkiyififit
      181 slvltlciea igvekmetil lsksifqpfi talfgfipnc aitvilaqly tisgisfgsl
      241 laglitnagl glvcliryga skenivkvfi ilyitavlsg ilmill
//
LOCUS       WP_235901047             496 aa            linear   BCT 02-MAR-2025
DEFINITION  SMP-30/gluconolactonase/LRE family protein [Pontixanthobacter
            aquaemixtae].
ACCESSION   WP_235901047
VERSION     WP_235901047.1
KEYWORDS    RefSeq.
SOURCE      Pontixanthobacter aquaemixtae
  ORGANISM  Pontixanthobacter aquaemixtae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Pontixanthobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020039.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08450.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Pontixanthobacter aquaemixtae"
                     /db_xref="taxon:1958940"
     Protein         1..496
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /calculated_mol_wt=51326
     Region          5..219
                     /region_name="YvrE"
                     /note="Sugar lactone lactonase YvrE [Carbohydrate
                     transport and metabolism]; COG3386"
                     /db_xref="CDD:442613"
     Region          122..399
                     /region_name="Vgb"
                     /note="Streptogramin lyase [Defense mechanisms]; COG4257"
                     /db_xref="CDD:443399"
     Region          361..>494
                     /region_name="NHL"
                     /note="NHL repeat unit of beta-propeller proteins;
                     cl18310"
                     /db_xref="CDD:302697"
     Region          366..399
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          405..461
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
ORIGIN      
        1 mrtgpdgriy vaqvpgssis aidpdsgave ticaidgpvt apddlvfdeh gnmfitevtl
       61 gkvsmlsadg ayrvvngamp vanpitmheg rliagecrpd grvmeldkdt gaerlilena
      121 pmpnaftvgp dgklympmma vneiwridlq ggdhevvagd lgvpdsvkfd skgrivstqv
      181 asgdvlridp qtgerevlat vapgldnctf vgdrlfvssi sgqvnevlsd gttknlvpdg
      241 lqwpmglalg edgslfiadg aysylvdpdg trqtigflfy pgypgfargv aadgpgqwlt
      301 tnaggqvmrw nlasqesevv aegfevlfgv traqdgsaif adgaagrvlh atngsveela
      361 sgldrpmgva vssggkvfvs enragrvvsi kggatetvid glrepqgiai hadrlfildv
      421 gdrslvsaal dgsdrqtias nlpvkappgv tpkilggvgn lsgpmesfag iavaadgtiy
      481 vsgdaegsvl slapvq
//
LOCUS       WP_235901043             394 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Pontixanthobacter
            aquaemixtae].
ACCESSION   WP_235901043
VERSION     WP_235901043.1
KEYWORDS    RefSeq.
SOURCE      Pontixanthobacter aquaemixtae
  ORGANISM  Pontixanthobacter aquaemixtae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Pontixanthobacter.
REFERENCE   1  (residues 1 to 394)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 394)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02770.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Pontixanthobacter aquaemixtae"
                     /db_xref="taxon:1958940"
     Protein         1..394
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=43404
     Region          20..351
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
ORIGIN      
        1 mpksergiqr easmdfkwtd eeqafrerll aflektlpdd werfsqhgpa speltryaee
       61 fcgkladekl ltphwakeig gegldpwhqt ilaevmwiag eprggqymnv nwigptlmky
      121 gsalqqeqyl peivegkalw cqgfsepgsg sdlaslrtra elvgeeyvvn gqkiwtsyag
      181 lagtcfllcr tsddrkrgit illipmdtpg itvrqipsli gegdihevff ddvrvpasar
      241 lgdegqawei igysltnerl gipryslara aldravsile dagdfddpgv rieaghaaal
      301 ceasrmasya ivskraqgek igaeassarf atimaerrva efvseylpea lcdahpylkm
      361 hhqrgivagi aagaaeiqln iiasdvlglp repr
//
LOCUS       WP_235900891             115 aa            linear   BCT 02-MAR-2025
DEFINITION  BsuBI/PstI family type II restriction endonuclease [Xanthomonas
            cissicola].
ACCESSION   WP_235900891
VERSION     WP_235900891.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas cissicola
  ORGANISM  Xanthomonas cissicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 115)
  AUTHORS   Steczkiewicz,K., Muszewska,A., Knizewski,L., Rychlewski,L. and
            Ginalski,K.
  TITLE     Sequence, structure and functional diversity of PD-(D/E)XK
            phosphodiesterase superfamily
  JOURNAL   Nucleic Acids Res 40 (15), 7016-7045 (2012)
   PUBMED   22638584
REFERENCE   2  (residues 1 to 115)
  AUTHORS   Xu,G.L., Kapfer,W., Walter,J. and Trautner,T.A.
  TITLE     BsuBI--an isospecific restriction and modification system of PstI:
            characterization of the BsuBI genes and enzymes
  JOURNAL   Nucleic Acids Res 20 (24), 6517-6523 (1992)
   PUBMED   1480472
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018339.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06616.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Xanthomonas cissicola"
                     /db_xref="taxon:86186"
     Protein         1..115
                     /product="BsuBI/PstI family type II restriction
                     endonuclease"
                     /GO_function="GO:0000287 - magnesium ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0009036 - type II site-specific
                     deoxyribonuclease activity [Evidence IEA]"
                     /GO_process="GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /calculated_mol_wt=12565
     Region          <3..103
                     /region_name="BsuBI_PstI_RE"
                     /note="BsuBI/PstI restriction endonuclease domain;
                     pfam06616"
                     /db_xref="CDD:429034"
ORIGIN      
        1 mninpaktlp diilvdlesn sndhqdvlvv fvevvasdgp itrerkvalt mialeagfse
       61 knlafltayq drgkgvfkkg vsniawgsyi wfasepdnli emhkgsnfkl adnak
//
LOCUS       WP_235901103             399 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Pontixanthobacter aquaemixtae].
ACCESSION   WP_235901103
VERSION     WP_235901103.1
KEYWORDS    RefSeq.
SOURCE      Pontixanthobacter aquaemixtae
  ORGANISM  Pontixanthobacter aquaemixtae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Pontixanthobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Pontixanthobacter aquaemixtae"
                     /db_xref="taxon:1958940"
     Protein         1..399
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=42750
     Region          48..374
                     /region_name="MelB"
                     /note="Na+/melibiose symporter or related transporter
                     [Carbohydrate transport and metabolism]; COG2211"
                     /db_xref="CDD:441813"
ORIGIN      
        1 mreeqpatrq sarflllyal avaggavayv pfltivmpsr vselagavdv ewvayttffg
       61 aivaslanil fgwlsdriqn rriwvwggli assamlvcfp yvttlamlig fiilwqmaln
      121 mmlgplaawa gdsvpdqqkg mlggllafap avgalsaaiv tipglanfqe rlwivativa
      181 lcvlpvlllg kprrfaelea aagpesdvpg palrsrkvvi rmwfarllvq iceaalfanv
      241 lfwfrsidkt lgdddtaqil sivvvvaipi amvvgrwadr hdrpitplsv saafasigll
      301 lmafsstslt aiasyavfgi agtvflslht sqtlrvlpkp rnrgrdlgif nltntapslv
      361 mpwlvlslvp lfgfpallat lavlaalaag llwrlgklv
//
LOCUS       WP_235901135             130 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome c-type biogenesis protein [Pontixanthobacter
            aquaemixtae].
ACCESSION   WP_235901135
VERSION     WP_235901135.1
KEYWORDS    RefSeq.
SOURCE      Pontixanthobacter aquaemixtae
  ORGANISM  Pontixanthobacter aquaemixtae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Pontixanthobacter.
REFERENCE   1  (residues 1 to 130)
  AUTHORS   Thony-Meyer,L., Ritz,D. and Hennecke,H.
  TITLE     Cytochrome c biogenesis in bacteria: a possible pathway begins to
            emerge
  JOURNAL   Mol Microbiol 12 (1), 1-9 (1994)
   PUBMED   8057830
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10511314
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Pontixanthobacter aquaemixtae"
                     /db_xref="taxon:1958940"
     Protein         1..130
                     /product="cytochrome c-type biogenesis protein"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /calculated_mol_wt=14291
     Region          21..130
                     /region_name="CcmH"
                     /note="Cytochrome C biogenesis protein; pfam03918"
                     /db_xref="CDD:461092"
     Site            order(46,49)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:319866"
ORIGIN      
        1 mlaimilvpe plsaqqslpp aplayeqled paqeqaaqel metlrclkcq sqsiadsdap
       61 magdmrhqvr sriaagedpe airawlvery gdyvsyapsv settwplfav plllmlvaga
      121 liwrrlrksa
//
LOCUS       WP_235901192             337 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase [Pontixanthobacter aquaemixtae].
ACCESSION   WP_235901192
VERSION     WP_235901192.1
KEYWORDS    RefSeq.
SOURCE      Pontixanthobacter aquaemixtae
  ORGANISM  Pontixanthobacter aquaemixtae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Pontixanthobacter.
REFERENCE   1  (residues 1 to 337)
  AUTHORS   Urbach,C., Evrard,C., Pudzaitis,V., Fastrez,J., Soumillion,P. and
            Declercq,J.P.
  TITLE     Structure of PBP-A from Thermosynechococcus elongatus, a
            penicillin-binding protein closely related to class A
            beta-lactamases
  JOURNAL   J Mol Biol 386 (1), 109-120 (2009)
   PUBMED   19100272
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024748.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13354.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pontixanthobacter aquaemixtae"
                     /db_xref="taxon:1958940"
     Protein         1..337
                     /product="serine hydrolase"
                     /GO_function="GO:0008800 - beta-lactamase activity
                     [Evidence IEA]"
                     /GO_process="GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=36240
     Region          45..322
                     /region_name="PenP"
                     /note="Beta-lactamase class A [Defense mechanisms];
                     COG2367"
                     /db_xref="CDD:441934"
ORIGIN      
        1 maiglaaaqp vhaqtsefea sfdatfgtqa rapddfdavy etgserriam aadgdmgrig
       61 vaaidlstgd risvlgdqrf pmastskvai aatflagvdq grwsltseyp llipvrsaky
      121 strvapvrhg nyitaqnhle lmiskscnac tdallkvvgg psavnafmrn agihdfqltr
      181 diatlvrddg efdpvvtidt rdsaspnamv klladiyqgr llspqsrail mdamrgtttg
      241 kyrmrsslps sanlahktgt ltrtasdigi fhtpdgraia iaiyvtgqsk nladesankr
      301 qsrrlrddri stiarevyna fsrrgqnwtn sqygtgg
//
LOCUS       WP_235901195             199 aa            linear   BCT 02-MAR-2025
DEFINITION  Pycsar system effector family protein [Pontixanthobacter
            aquaemixtae].
ACCESSION   WP_235901195
VERSION     WP_235901195.1
KEYWORDS    RefSeq.
SOURCE      Pontixanthobacter aquaemixtae
  ORGANISM  Pontixanthobacter aquaemixtae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Pontixanthobacter.
REFERENCE   1  (residues 1 to 199)
  AUTHORS   Tal,N., Morehouse,B.R., Millman,A., Stokar-Avihail,A., Avraham,C.,
            Fedorenko,T., Yirmiya,E., Herbst,E., Brandis,A., Mehlman,T.,
            Oppenheimer-Shaanan,Y., Keszei,A.F.A., Shao,S., Amitai,G.,
            Kranzusch,P.J. and Sorek,R.
  TITLE     Cyclic CMP and cyclic UMP mediate bacterial immunity against phages
  JOURNAL   Cell 184 (23), 5728-5739 (2021)
   PUBMED   34644530
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040152.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18967.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Pontixanthobacter aquaemixtae"
                     /db_xref="taxon:1958940"
     Protein         1..199
                     /product="Pycsar system effector family protein"
                     /calculated_mol_wt=21540
     Region          80..184
                     /region_name="DUF5706"
                     /note="Family of unknown function (DUF5706); pfam18967"
                     /db_xref="CDD:465934"
ORIGIN      
        1 makseekkpp qtkkakqgap akqattintt pdkpvfsaha vhmmrtaqin tltlsqmadq
       61 kasilmgatf lvfslsvsrs lagtippslm ilaafsflss lcavmavlps vkkpdlgktt
      121 pnklffghfa gmeeeqwaqs vlddlqsdet vframmhdiy qngqvlakrk yrflavayqi
      181 fivgliatvi sfavealsa
//
LOCUS       WP_235901369             707 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Anaerovibrio slackiae].
ACCESSION   WP_235901369
VERSION     WP_235901369.1
KEYWORDS    RefSeq.
SOURCE      Anaerovibrio slackiae
  ORGANISM  Anaerovibrio slackiae
            Bacteria; Bacillati; Bacillota; Negativicutes; Selenomonadales;
            Selenomonadaceae; Anaerovibrio.
REFERENCE   1  (residues 1 to 707)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 707)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019348.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07728.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Anaerovibrio slackiae"
                     /db_xref="taxon:2652309"
     Protein         1..707
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=80860
     Region          <206..>254
                     /region_name="RPT1"
                     /note="ATP-dependent 26S proteasome regulatory subunit
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1222"
                     /db_xref="CDD:440835"
     Region          <232..665
                     /region_name="McrB"
                     /note="5-methylcytosine-specific restriction endonuclease
                     McrBC, GTP-binding regulatory subunit McrB [Defense
                     mechanisms]; COG1401"
                     /db_xref="CDD:441011"
     Region          343..>427
                     /region_name="COG4127"
                     /note="Predicted restriction endonuclease, Mrr-cat
                     superfamily [General function prediction only]"
                     /db_xref="CDD:443303"
ORIGIN      
        1 mrtgkqprgi vahgyvcrep fydkagesri dvefdriqdf dsgydflpqn klkmefpqqd
       61 wspkasgiei rqevlgklre qwqamldnef wppeaeynpg isseeyadif rtleankldt
      121 lyylykmggi gsckqleeky gntashynsn airickvvqy etgcdlyarq rkrkngelay
      181 wpilfqgrda menesgkfvy klrqsvrdai illdkenffe eikimnqsey dkniilygpp
      241 gtgktyktaa yavaicdgea vedlanyddv mkrynelkae grvefitfhq sygyedfieg
      301 irpvmdeggn elsykvvpgi fkrfcseask sevaannfgi akdasvwkat irdnvlqdcy
      361 ennyvridwe mdaqyasgfv ndinigdiil ttdksrtyih giavvtseay kkegvdedtt
      421 trnvewlvkg lheditsina gkvlhrmtca rvpnvkvkdl idmakdrnsg lsdvvakdnt
      481 kpyvfiidei nrgniskifg elitlledtk ragmkealsv slpysdesfs vpanvyivgt
      541 mntadrsiam mdtalrrrfr fiemlpepki legikvgnid ipavlktink ritylfdreh
      601 tighafftgl rgdnatienf grifeksiip llqeyfyedy hkiqlvlgdn akssdkykfi
      661 iadelkkddn vfrgnvddld ipdkiyrink nafsnensyl eiieave
//
LOCUS       WP_235901488             332 aa            linear   BCT 02-MAR-2025
DEFINITION  DegT/DnrJ/EryC1/StrS family aminotransferase [Anaerovibrio
            slackiae].
ACCESSION   WP_235901488
VERSION     WP_235901488.1
KEYWORDS    RefSeq.
SOURCE      Anaerovibrio slackiae
  ORGANISM  Anaerovibrio slackiae
            Bacteria; Bacillati; Bacillota; Negativicutes; Selenomonadales;
            Selenomonadaceae; Anaerovibrio.
REFERENCE   1  (residues 1 to 332)
  AUTHORS   Ahlert,J., Distler,J., Mansouri,K. and Piepersberg,W.
  TITLE     Identification of stsC, the gene encoding the
            L-glutamine:scyllo-inosose aminotransferase from
            streptomycin-producing Streptomycetes
  JOURNAL   Arch Microbiol 168 (2), 102-113 (1997)
   PUBMED   9238101
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013227.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01041.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Anaerovibrio slackiae"
                     /db_xref="taxon:2652309"
     Protein         1..332
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /calculated_mol_wt=37998
     Region          2..322
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(2,5,72,98,101,124,129)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:99740"
     Site            129
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99740"
ORIGIN      
        1 mtaaiyaavy acdcgrgtnt ilseysyfga vyavlenqgi arlcpfdset lnidvaaihk
       61 sidsntkavl ithtwgnpcd mdklnqikqq ydikiisdas hahgaewrgk kignidcedi
      121 acfslgkgkl isggelgiav tnnkilydkl lmlghpnrip nalignefin ysngfgiklr
      181 phtlsmviar nqlkkynrka rlnretnmfl eneidkidgf ktikkyekas rvywklliri
      241 kkeywkdwsv eeivkrlkin gvdteqfhny dfkyendisy nvrylgqldn csnmmppndl
      301 iflptyidvn kkemekiina fknvsyerkf si
//
LOCUS       WP_235901597             471 aa            linear   BCT 02-MAR-2025
DEFINITION  RsmF rRNA methyltransferase first C-terminal domain-containing
            protein [Pseudoramibacter porci].
ACCESSION   WP_235901597
VERSION     WP_235901597.1
KEYWORDS    RefSeq.
SOURCE      Pseudoramibacter porci
  ORGANISM  Pseudoramibacter porci
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Eubacteriaceae; Pseudoramibacter.
REFERENCE   1  (residues 1 to 471)
  AUTHORS   Demirci,H., Larsen,L.H., Hansen,T., Rasmussen,A., Cadambi,A.,
            Gregory,S.T., Kirpekar,F. and Jogl,G.
  TITLE     Multi-site-specific 16S rRNA methyltransferase RsmF from Thermus
            thermophilus
  JOURNAL   RNA 16 (8), 1584-1596 (2010)
   PUBMED   20558545
REFERENCE   2  (residues 1 to 471)
  AUTHORS   Hallberg,B.M., Ericsson,U.B., Johnson,K.A., Andersen,N.M.,
            Douthwaite,S., Nordlund,P., Beuscher,A.E. 4th and Erlandsen,H.
  TITLE     The structure of the RNA m5C methyltransferase YebU from
            Escherichia coli reveals a C-terminal RNA-recruiting PUA domain
  JOURNAL   J Mol Biol 360 (4), 774-787 (2006)
   PUBMED   16793063
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028436.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17126.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pseudoramibacter porci"
                     /db_xref="taxon:2606631"
     Protein         1..471
                     /product="RsmF rRNA methyltransferase first C-terminal
                     domain-containing protein"
                     /calculated_mol_wt=51918
     Region          5..466
                     /region_name="yebU"
                     /note="rRNA (cytosine-C(5)-)-methyltransferase RsmF;
                     Reviewed; PRK11933"
                     /db_xref="CDD:183387"
ORIGIN      
        1 mrqtlpadfl dkmsallgpe afraflesyr hvpkkglran tlkagrdemv qhipfktqpi
       61 pwcdtgvyid aeerpgkqla ynaglyyvqe psamipaaal aprpgervld mcaapggktt
      121 qlacalenqg llvanevvkt rakvlasnve rmgitnaait nvrpdqlidi fgpasfdkil
      181 vdapcsgegm frkdpavaaa wrlenvaqca rrqkkmletv dillkpggal vystctfape
      241 edeqiveylv qsgkyeaqpi tlpglpdhgr pewtahgcea vkqavrvmph rvegeghfia
      301 klkktaeaps evfskrsrpk kkkrslwrra skkdlkdfta fsetvglkwh gsdliiagdv
      361 lialpeglyp dqldrgkwvr pgleigtfkk grfepahtfa malkadqias vydfkdedea
      421 yaylkgepiv nagahkgwtl mcwlgyplgw gkasggtikn hfpkglrilk k
//
LOCUS       WP_235901724             354 aa            linear   BCT 02-MAR-2025
DEFINITION  cyclic nucleotide-binding domain-containing protein [Alcanivorax
            sediminis].
ACCESSION   WP_235901724
VERSION     WP_235901724.1
KEYWORDS    RefSeq.
SOURCE      Alcanivorax sediminis
  ORGANISM  Alcanivorax sediminis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Alcanivoracaceae; Alcanivorax.
REFERENCE   1  (residues 1 to 354)
  AUTHORS   Yau,K.W.
  TITLE     Cyclic nucleotide-gated channels: an expanding new family of ion
            channels
  JOURNAL   Proc Natl Acad Sci U S A 91 (9), 3481-3483 (1994)
   PUBMED   7513422
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012257.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00027.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Alcanivorax sediminis"
                     /db_xref="taxon:2663008"
     Protein         1..354
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /calculated_mol_wt=39409
     Region          16..124
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(80..81,90..92)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(111..113,117..119)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          144..249
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(212..213,222..224)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Region          251..339
                     /region_name="PspE"
                     /note="Rhodanese-related sulfurtransferase [Inorganic ion
                     transport and metabolism]; COG0607"
                     /db_xref="CDD:440372"
ORIGIN      
        1 msttaaemsr lenfipfdcl seshlqeiqg qieviklapg rllfkrgqts dkayflvegs
       61 ldltdasfqv rhftaddden ylaldnypeh tinaisaeat tlyaidrnkl dllmtwtqaa
      121 esmldegdde serdwmdall sselfaavpp amihslfvkf eerevqlget ivtegedgdt
      181 ffvikqgkam vsrskgakqe tlaalsagrf fgedalisds prnatvtmts dgivmclgkk
      241 dfqsilqdsv irhltedeld tmvleadtac ilvdvrlpme frhdrtpgar niplnelrre
      301 vhnlekdffy vvcgdgrrse lgayilseag lnayvldrgk padaeqqntm veqa
//
LOCUS       WP_235901754             384 aa            linear   BCT 02-MAR-2025
DEFINITION  alanine racemase [Ochrobactrum quorumnocens].
ACCESSION   WP_235901754
VERSION     WP_235901754.1
KEYWORDS    RefSeq.
SOURCE      Ochrobactrum quorumnocens
  ORGANISM  Ochrobactrum quorumnocens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Ochrobactrum.
REFERENCE   1  (residues 1 to 384)
  AUTHORS   Shaw,J.P., Petsko,G.A. and Ringe,D.
  TITLE     Determination of the structure of alanine racemase from Bacillus
            stearothermophilus at 1.9-A resolution
  JOURNAL   Biochemistry 36 (6), 1329-1342 (1997)
   PUBMED   9063881
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013345.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01168.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Ochrobactrum quorumnocens"
                     /db_xref="taxon:271865"
     Protein         1..384
                     /product="alanine racemase"
                     /EC_number="5.1.1.1"
                     /calculated_mol_wt=40824
     Region          16..365
                     /region_name="Dsd1"
                     /note="D-serine deaminase, pyridoxal phosphate-dependent
                     [Amino acid transport and metabolism]; COG3616"
                     /db_xref="CDD:442834"
ORIGIN      
        1 msdltaieaf nrsipadlpt pyveidderm mqnlkgmqrr adqagvalrp hikthknlti
       61 aqrqlelgai gvtaskpeea lafveggvps vtlaypivrp esidrlvrsa kvrqtellfi
      121 aaheigveai gasaqahgvk lgvflkvdvg lgrvgvkpqd paaerlahri akhphltfeg
      181 llshaghsyg sksaeelani anaeaqalle laeqlkksgv avsrisvgat ptclgaqipa
      241 giteirpgny vfldrtalrl gitsaddmsl sviativahn dyhfivdags kslssdlgah
      301 gsggsgfgia vsvntaapqt weverlseeh gfvrcsdtpp aigsrvrifp nhscavvaqf
      361 drvtlrqsdg rpctlwtnar grqt
//
LOCUS       WP_235901768             305 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Ochrobactrum
            quorumnocens].
ACCESSION   WP_235901768
VERSION     WP_235901768.1
KEYWORDS    RefSeq.
SOURCE      Ochrobactrum quorumnocens
  ORGANISM  Ochrobactrum quorumnocens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Ochrobactrum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Ochrobactrum quorumnocens"
                     /db_xref="taxon:271865"
     Protein         1..305
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=33980
     Region          <49..298
                     /region_name="PRK09685"
                     /note="DNA-binding transcriptional activator FeaR;
                     Provisional"
                     /db_xref="CDD:236612"
     Region          <198..296
                     /region_name="GlxA"
                     /note="Transcriptional regulator GlxA, contains an amidase
                     domain and an AraC-type DNA-binding HTH domain
                     [Transcription]; COG4977"
                     /db_xref="CDD:444002"
ORIGIN      
        1 mrsntdninn lhelvsgtqg rvgsnlhpgm vdcvlsrfty gmtefsqhty ssdqncavil
       61 lepvrnlkwk pgcgeervss ftagtafvip anqtleiwwt eaaeylqlti piagnlveid
      121 kesgtdavst vaeivnfssk qclqvcqlvi eqlmepagge qnylaslysv lvhllqrnam
      181 ivqssmvtpa glssyaarqi eaylndkfre pvsvpdmasa lgisaghfat rfresfgqtp
      241 hqylmslrld eaerwlretd mpistiaarl sfssqshltt alrkyrrltl geirrrsshl
      301 ryrtp
//
LOCUS       WP_235900695             290 aa            linear   BCT 02-MAR-2025
DEFINITION  pirin family protein [Lolliginicoccus suaedae].
ACCESSION   WP_235900695
VERSION     WP_235900695.1
KEYWORDS    RefSeq.
SOURCE      Lolliginicoccus suaedae
  ORGANISM  Lolliginicoccus suaedae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Hoyosellaceae; Lolliginicoccus.
REFERENCE   1  (residues 1 to 290)
  AUTHORS   Pang,H., Bartlam,M., Zeng,Q., Miyatake,H., Hisano,T., Miki,K.,
            Wong,L.L., Gao,G.F. and Rao,Z.
  TITLE     Crystal structure of human pirin: an iron-binding nuclear protein
            and transcription cofactor
  JOURNAL   J Biol Chem 279 (2), 1491-1498 (2004)
   PUBMED   14573596
REFERENCE   2  (residues 1 to 290)
  AUTHORS   Orzaez,D., de Jong,A.J. and Woltering,E.J.
  TITLE     A tomato homologue of the human protein PIRIN is induced during
            programmed cell death
  JOURNAL   Plant Mol Biol 46 (4), 459-468 (2001)
   PUBMED   11485202
REFERENCE   3  (residues 1 to 290)
  AUTHORS   Dechend,R., Hirano,F., Lehmann,K., Heissmeyer,V., Ansieau,S.,
            Wulczyn,F.G., Scheidereit,C. and Leutz,A.
  TITLE     The Bcl-3 oncoprotein acts as a bridging factor between
            NF-kappaB/Rel and nuclear co-regulators
  JOURNAL   Oncogene 18 (22), 3316-3323 (1999)
   PUBMED   10362352
REFERENCE   4  (residues 1 to 290)
  AUTHORS   Wendler,W.M., Kremmer,E., Forster,R. and Winnacker,E.L.
  TITLE     Identification of pirin, a novel highly conserved nuclear protein
  JOURNAL   J Biol Chem 272 (13), 8482-8489 (1997)
   PUBMED   9079676
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014708.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02678.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Lolliginicoccus suaedae"
                     /db_xref="taxon:2605429"
     Protein         1..290
                     /product="pirin family protein"
                     /calculated_mol_wt=30266
     Region          32..155
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 mpprsprpsm prpsssvriv raeerfrtst twsdawysfs fgphydpant hhgcllihnd
       61 etlapgtgfd lhphrdneii twvlegslvh rdtsgntgii rpgqvqrlsa gsgiehsern
      121 dpapgstdlp sahvrflqmt vtptstggtp dyaqadvsta leggtwvvla sgmaehqrta
      181 avtlgnthaa lhavrpgagt slelpsapwi hlhvargtvt frggavadds ggaasggdrl
      241 ggelsgepsg geielragds vrltgagggf tagedgaevl vwemhaglwg
//
LOCUS       WP_235901864             257 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Alcanivorax sediminis].
ACCESSION   WP_235901864
VERSION     WP_235901864.1
KEYWORDS    RefSeq.
SOURCE      Alcanivorax sediminis
  ORGANISM  Alcanivorax sediminis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Alcanivoracaceae; Alcanivorax.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12697.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Alcanivorax sediminis"
                     /db_xref="taxon:2663008"
     Protein         1..257
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=28220
     Region          40..139
                     /region_name="EstA"
                     /note="Triacylglycerol esterase/lipase EstA, alpha/beta
                     hydrolase fold [Lipid transport and metabolism]; COG1075"
                     /db_xref="CDD:440693"
     Region          42..245
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
ORIGIN      
        1 mthpyrwmsa lllvlsgwml lsmqpakaem lpaltggqsd cvvvlhglrr sawamsried
       61 tlteagylvy nqdypstsap vealaheeis ralgwcraqt veqvhfvths mggilvrsyl
      121 qhetipelgr vvmlappnhg sevvdrmqdw wlfqkltgpa gqqlgtgpeg iaanlkpvsa
      181 eigviagsrt vdpwlswmip gnddgkvslp strlkemrdh lvvpashvfi mrkravieqv
      241 ltflkhgyfg kdgegsa
//
LOCUS       WP_235901816             169 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Ochrobactrum quorumnocens].
ACCESSION   WP_235901816
VERSION     WP_235901816.1
KEYWORDS    RefSeq.
SOURCE      Ochrobactrum quorumnocens
  ORGANISM  Ochrobactrum quorumnocens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Ochrobactrum.
REFERENCE   1  (residues 1 to 169)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 169)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025054.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13673.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Ochrobactrum quorumnocens"
                     /db_xref="taxon:271865"
     Protein         1..169
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=18329
     Region          37..137
                     /region_name="PhnO"
                     /note="N-acetyltransferase, GNAT superfamily (includes
                     histone acetyltransferase HPA2) [Transcription, General
                     function prediction only]; COG0454"
                     /db_xref="CDD:440222"
ORIGIN      
        1 mnirigkanq dhfsalraie lssfetllaa gavtgkatas sdeelqqyld adflyaafde
       61 aaipvgyggg yiaenwlhig evdvhpswqr kgigrqimnv mlnegrtkkl rgstlttdrl
      121 apfnapfyts igfhaiegda cperlgaila aektqgldpl rrvammlvf
//
LOCUS       WP_235901916             281 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Ochrobactrum quorumnocens].
ACCESSION   WP_235901916
VERSION     WP_235901916.1
KEYWORDS    RefSeq.
SOURCE      Ochrobactrum quorumnocens
  ORGANISM  Ochrobactrum quorumnocens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Ochrobactrum.
REFERENCE   1  (residues 1 to 281)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 281)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Ochrobactrum quorumnocens"
                     /db_xref="taxon:271865"
     Protein         1..281
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=29792
     Region          12..>231
                     /region_name="BioF"
                     /note="7-keto-8-aminopelargonate synthetase or related
                     enzyme [Coenzyme transport and metabolism]; COG0156"
                     /db_xref="CDD:439926"
ORIGIN      
        1 mrslaqmgvp itmeeplgar mringrpvdy fcgtsyfclh ghqevidaac aatreyglgp
       61 gtlalmpiya elkaalcawf atedvvplis gyvspmallq glrddfdvvf vdqathyssr
      121 daiaglgepv yqfrhldans lsgvlrlhlr arqravivtd gvfpssgala pladysnama
      181 aydncllcvd dshgvgvlgq sgrgslqhan leqegyyfsg tlskvfgalg gdcsrdkrac
      241 gkdqaevdgp agglaatpsr ccsgnfrsei vegstadprr s
//
LOCUS       WP_235901955             640 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase [Alcanivorax sediminis].
ACCESSION   WP_235901955
VERSION     WP_235901955.1
KEYWORDS    RefSeq.
SOURCE      Alcanivorax sediminis
  ORGANISM  Alcanivorax sediminis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Alcanivoracaceae; Alcanivorax.
REFERENCE   1  (residues 1 to 640)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Alcanivorax sediminis"
                     /db_xref="taxon:2663008"
     Protein         1..640
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=70839
     Region          44..617
                     /region_name="MdoB"
                     /note="Phosphoglycerol transferase MdoB/OpgB, AlkP
                     superfamily [Cell wall/membrane/envelope biogenesis];
                     COG1368"
                     /db_xref="CDD:440979"
     Region          280..551
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
     Site            order(287,327,426,483..484)
                     /site_type="active"
                     /db_xref="CDD:293732"
     Site            order(287,327,426,484)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293732"
ORIGIN      
        1 mfqwslfgls ltllfwcgla ivymqrkiya lrnyvdtrpr lddvwvlfli sgvvalahpw
       61 pmlygslval iglslmimwl dvvlvhlfgf evnlnnlkif lqgaesfsgd skeivdalvk
      121 rswflatpla ivaflvaiya qmagspgvrd valasvsvlf lmgitksrfg lisapvwmgl
      181 laglavlmay lrdsgvdwpw wqaaagggll igvvvlklla qlfntpffsv rspvrdfirg
      241 arlgpvsava lkdediqrhv vlpmappsps ksfglcrgan vilitmesla rdsiypfkkd
      301 garlkfmesf ankslvskmh yaccpntnra iqhiyqgnyp vngeypflpl lksqgyravy
      361 mmisrtrffn lcdilmdagf devldrdslg ldpdrgdyaf ldsvdavnes lgegpfflhl
      421 kneqthspyq vvnkeqfdrh egegreicfr naaeeadsvl akflgalgel rdlsntliiy
      481 tgdhgqsfge fgyvshssss vngqvrtplm mshpalpage varsthfdvm ptildllgvh
      541 cessifgrsl lhganhrpll lysqtrkgna psnasllddd skimidliyg yryrldaedh
      601 iidklstada dyqetllyaa lekrglisds afsprqktgg
//
LOCUS       WP_235902044             343 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: alcohol dehydrogenase catalytic domain-containing
            protein [Ochrobactrum].
ACCESSION   WP_235902044
VERSION     WP_235902044.1
KEYWORDS    RefSeq.
SOURCE      Ochrobactrum
  ORGANISM  Ochrobactrum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group.
REFERENCE   1  (residues 1 to 343)
  AUTHORS   Taneja,B. and Mande,S.C.
  TITLE     Conserved structural features and sequence patterns in the GroES
            fold family
  JOURNAL   Protein Eng 12 (10), 815-818 (1999)
   PUBMED   10556240
REFERENCE   2  (residues 1 to 343)
  AUTHORS   Murzin,A.G.
  TITLE     Structural classification of proteins: new superfamilies
  JOURNAL   Curr Opin Struct Biol 6 (3), 386-394 (1996)
   PUBMED   8804825
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08240.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Ochrobactrum"
                     /db_xref="taxon:528"
     Protein         1..343
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /calculated_mol_wt=36269
     Region          4..337
                     /region_name="CAD"
                     /note="Cinnamyl alcohol dehydrogenases (CAD) and related
                     proteins; cd08245"
                     /db_xref="CDD:176207"
     Site            order(40..42,45,154,158,178,180..182,200..202,206,
                     237..240,260..261,287..289)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:176207"
     Site            order(40,42,61,87,154,289)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:176207"
     Site            order(40,61,154)
                     /site_type="other"
                     /note="catalytic Zn binding site [ion binding]"
                     /db_xref="CDD:176207"
     Site            order(92,95,98,106)
                     /site_type="other"
                     /note="structural Zn binding site [ion binding]"
                     /db_xref="CDD:176207"
     Site            order(94,96..97,105..107,192..194,196,208,211..212,259,
                     261,282..288,297,301,304)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:176207"
ORIGIN      
        1 mkmkavvmtg anrpwevqev pmpeakpgli lvkvhasgmc ytdvwatqga ggdiypqtpg
       61 hevvgeivev gagvhtrkvg drvgttwvqs scgrclycrq nrpltgqtam ncdsprttgf
      121 atqgghaeyi aisaegsvll pdgldyadaa pmmcagyttw sglrdaepkp gdriavlgig
      181 glghvalqfs kalgfetiai thsadkhkla adlgadmvva dgkellavgg advllvttnd
      241 fataekavag mrpdgrivlc gldfskpfai psdgkpfhmm rqrvigsthg gqhylaeild
      301 laakgrvkpi vetfsldeat kayerlssgk mrfrgvflps rsa
//
LOCUS       WP_235902092             204 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Alcanivorax sediminis].
ACCESSION   WP_235902092
VERSION     WP_235902092.1
KEYWORDS    RefSeq.
SOURCE      Alcanivorax sediminis
  ORGANISM  Alcanivorax sediminis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Alcanivoracaceae; Alcanivorax.
REFERENCE   1  (residues 1 to 204)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 204)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025054.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13673.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Alcanivorax sediminis"
                     /db_xref="taxon:2663008"
     Protein         1..204
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=22735
     Region          52..199
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
     Site            order(129..131,141..142)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
ORIGIN      
        1 mldwirrllg rvktdaeqeq spsarmaept lsqeavqase ptdafaaflp fqirplqsgd
       61 lsklirifrd aiqvstaghy dqqqrdawsl aqnheslisl lgdgetvvae wdqelvgfaq
      121 riqdsinmiy vhpdsarvgi atllyqhled sarveglsrl tahvsltahd ffqfmgfnse
      181 geeqadrggv tltrhlmrks lvsn
//
LOCUS       WP_235902235             183 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase family protein [Streptomyces sp. 1-11].
ACCESSION   WP_235902235
VERSION     WP_235902235.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. 1-11
  ORGANISM  Streptomyces sp. 1-11
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13808.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Streptomyces sp. 1-11"
                     /db_xref="taxon:2590549"
     Protein         1..183
                     /product="transposase family protein"
                     /calculated_mol_wt=18848
ORIGIN      
        1 mavvlalaac avlagatsll avgewvadap pqvlerlgvr pdpvlprrlv paettvrrll
       61 acvhgdaldr avggwladrc pvgsglrgls vdgkslrgaa rargrkihll aavehntglv
      121 laqldvgett cfqplldtva dlagrsspat hcipsastpa tfwpagptts rssrairrnc
      181 asi
//
LOCUS       WP_235902341             121 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6479 family protein [unclassified Streptomyces].
ACCESSION   WP_235902341
VERSION     WP_235902341.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039795.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20087.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..121
                     /product="DUF6479 family protein"
                     /calculated_mol_wt=12934
     Region          1..105
                     /region_name="DUF6479"
                     /note="Family of unknown function (DUF6479); pfam20087"
                     /db_xref="CDD:466286"
ORIGIN      
        1 mdtaqmqlaa asglmslvlf liavgllall aggfwmnsrv kyresprprp eeqpqlppeg
       61 avhevrenre sqevpvtppg grpltpyels nldtrpsesk drprwskgss gsfgggglga
      121 h
//
LOCUS       WP_235902124             375 aa            linear   BCT 02-MAR-2025
DEFINITION  amidoligase family protein [Pontixanthobacter gangjinensis].
ACCESSION   WP_235902124
VERSION     WP_235902124.1
KEYWORDS    RefSeq.
SOURCE      Pontixanthobacter gangjinensis
  ORGANISM  Pontixanthobacter gangjinensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Pontixanthobacter.
REFERENCE   1  (residues 1 to 375)
  AUTHORS   Iyer,L.M., Burroughs,A.M. and Aravind,L.
  TITLE     Unraveling the biochemistry and provenance of pupylation: a
            prokaryotic analog of ubiquitination
  JOURNAL   Biol Direct 3, 45 (2008)
   PUBMED   18980670
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023645.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12224.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Pontixanthobacter gangjinensis"
                     /db_xref="taxon:1028742"
     Protein         1..375
                     /product="amidoligase family protein"
                     /calculated_mol_wt=40932
     Region          133..329
                     /region_name="Amidoligase_2"
                     /note="Putative amidoligase enzyme; pfam12224"
                     /db_xref="CDD:432409"
ORIGIN      
        1 mgaydlalnl dwkmgfevel vaprgssrlq ladkvarscg gtvsrffhpq sepsdtpdrp
       61 tfenltlafh vtgstgehia sfvddltlqa dmnkrkaplp gwyriiaddg rilrlvmrhc
      121 dpdashmell gplaelfgts pqphegnmvr vvddrgisva iaaplpgere rpcelvtapi
      181 aadhevvltd llgqaaelgf fiptegathi hfdaerlcsa rviaklvavl ekfgddlkrv
      241 vgvnancvrl gswpaslrel tsgaefqale wpdaraalaa lklskycdfn llniasrnta
      301 khtfevrilp asldalcile aaelfqailh wcckndadad ampasfaali gqlslaghaq
      361 emwkerafks rfldk
//
LOCUS       WP_235902419             117 aa            linear   BCT 02-MAR-2025
DEFINITION  hotdog domain-containing protein [Pontixanthobacter gangjinensis].
ACCESSION   WP_235902419
VERSION     WP_235902419.1
KEYWORDS    RefSeq.
SOURCE      Pontixanthobacter gangjinensis
  ORGANISM  Pontixanthobacter gangjinensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Pontixanthobacter.
REFERENCE   1  (residues 1 to 117)
  AUTHORS   Benning,M.M., Wesenberg,G., Liu,R., Taylor,K.L., Dunaway-Mariano,D.
            and Holden,H.M.
  TITLE     The three-dimensional structure of 4-hydroxybenzoyl-CoA
            thioesterase from Pseudomonas sp. Strain CBS-3
  JOURNAL   J Biol Chem 273 (50), 33572-33579 (1998)
   PUBMED   9837940
REFERENCE   2  (residues 1 to 117)
  AUTHORS   Leesong,M., Henderson,B.S., Gillig,J.R., Schwab,J.M. and Smith,J.L.
  TITLE     Structure of a dehydratase-isomerase from the bacterial pathway for
            biosynthesis of unsaturated fatty acids: two catalytic activities
            in one active site
  JOURNAL   Structure 4 (3), 253-264 (1996)
   PUBMED   8805534
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015048.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03061.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Pontixanthobacter gangjinensis"
                     /db_xref="taxon:1028742"
     Protein         1..117
                     /product="hotdog domain-containing protein"
                     /calculated_mol_wt=11920
     Region          1..108
                     /region_name="YciA"
                     /note="Acyl-CoA hydrolase [Lipid transport and
                     metabolism]; COG1607"
                     /db_xref="CDD:441215"
ORIGIN      
        1 mpadtnpygg vfggwlmaqm algagslasr egkgkavvvs atdfafpgam qvddelsvyc
       61 aiattgttsl titaeaiare rngeaetkva qgtfkfvlln dvnkpravna aalsanh
//
LOCUS       WP_235902489             208 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6286 domain-containing protein [Streptomyces sp. 1-11].
ACCESSION   WP_235902489
VERSION     WP_235902489.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. 1-11
  ORGANISM  Streptomyces sp. 1-11
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039399.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19803.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Streptomyces sp. 1-11"
                     /db_xref="taxon:2590549"
     Protein         1..208
                     /product="DUF6286 domain-containing protein"
                     /calculated_mol_wt=22640
     Region          102..204
                     /region_name="DUF6286"
                     /note="Family of unknown function (DUF6286); pfam19803"
                     /db_xref="CDD:466194"
ORIGIN      
        1 mpltkepdpp erdvspsdlt ageregghrt rrkwsarsvt aalvaavilv aavatlvdvv
       61 avragrpaaa wrrhlayela trpvddvwml tgaavaaavg vwlivlaltp gqrrwlplrs
      121 pagcprlraf vdrdgaavll rdaamrvpgv gaahvlagrh rikaraevrf reprqvkddl
      181 tavlaeerdr lalarppria vrtrrrtr
//
LOCUS       WP_235902532            5136 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Streptomyces sp. 1-11].
ACCESSION   WP_235902532
VERSION     WP_235902532.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. 1-11
  ORGANISM  Streptomyces sp. 1-11
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 5136)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 5136)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..5136
                     /organism="Streptomyces sp. 1-11"
                     /db_xref="taxon:2590549"
     Protein         1..5136
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=532762
     Region          8..1214
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          1057..1401
                     /region_name="KR_2_SDR_x"
                     /note="ketoreductase (KR), subgroup 2, complex (x) SDRs;
                     cd08953"
                     /db_xref="CDD:187656"
     Site            order(1209..1210,1212,1232..1235,1250..1253,1278..1280,
                     1301..1302,1324..1325,1339,1362)
                     /site_type="other"
                     /note="putative NADP binding site [chemical binding]"
                     /db_xref="CDD:187656"
     Site            order(1302,1326,1339,1343)
                     /site_type="active"
                     /db_xref="CDD:187656"
     Region          1444..1521
                     /region_name="AcpP"
                     /note="Acyl carrier protein [Lipid transport and
                     metabolism]; COG0236"
                     /db_xref="CDD:440006"
     Region          1578..>2098
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          2160..2426
                     /region_name="hot_dog"
                     /note="The hotdog fold was initially identified in the E.
                     coli FabA (beta-hydroxydecanoyl-acyl carrier protein
                     (ACP)-dehydratase) structure and subsequently in 4HBT
                     (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A
                     number of other seemingly unrelated...; cl00509"
                     /db_xref="CDD:469797"
     Region          2568..2943
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(2723,2725..2726,2728,2748..2750,2803..2805,
                     2849..2851,2864,2868,2896..2899)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(2827,2851,2864,2868)
                     /site_type="active"
                     /db_xref="CDD:187535"
     Region          3006..3064
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; pfam00550"
                     /db_xref="CDD:425746"
     Region          3142..4620
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          4738..4828
                     /region_name="Methyltransf_12"
                     /note="Methyltransferase domain; pfam08242"
                     /db_xref="CDD:400515"
     Region          4954..5013
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; pfam00550"
                     /db_xref="CDD:425746"
     Region          <5029..5090
                     /region_name="Trypan_PARP"
                     /note="Procyclic acidic repetitive protein (PARP);
                     pfam05887"
                     /db_xref="CDD:368653"
ORIGIN      
        1 msspevqaae tdvaiigmag rfpgaddlds fwrllregre gitrfspeel aaagvpsrll
       61 tdpayvpahg vipgvdlfdt gyfeftpaea amtdpqhrim lqtghaaleh agydparfdg
      121 lisvyagaav ntylqqqvlp hvdqtttsrh favmvgndkd ylatrlsykl dlkgpsytvq
      181 tacstslval hlacqgling ecdmalaggv tvklpqvkgy lyeegailsr dghvrafdad
      241 asgtvlgngv gvvvlkplrd aladrdtiha vikgtatnnd gsgkvsfaap gaagqsavir
      301 eahtvsgvdp rtigyveahg tatrlgdpve isaltkafre stpdtgfcai gsvksnvghl
      361 daaagvagvi ktalmmkhrt lvptvnhrtp npavdfaasp fkvstgttpw tgdgplragv
      421 ssfgiggtna havleeappv patggsrpqq vlvvsartps alrtaaddla ghlerddraa
      481 ladvaytlav grraheyrla vtgsdraala dalrgaeape qpatgeisfv faeevpdaaa
      541 laerwcaadp vfaghhatav tagalghgar gaafavqyal grlwldlglr pvavhgdgla
      601 ahvaacvtga ltpaeavaal ghpdaaaprp argrdrialr gaadevrgaa lgvadgpwda
      661 varawqagad vdwaawfage ergrvplpty pfegrrcwlt gpdgagarqp aapgphplld
      721 envstldtla yrttrtgeey yladhrvqge pvmpavahle laraagelsl gtavrlhgvs
      781 ferllshaag artslislwr eddavgfeit gddtvyaagg iepgpaerpa padlaaaaar
      841 ctetlahprc ydalrglgld ygprmralte vrmgdgeala tlelpdgaal dgavlnpall
      901 dgalhalvll larsygaaae gflplalagl tvhapvtgpc ralvttrrlg ersahadltl
      961 tdadgavlar ltdlavrvlg atgeapagga agpgeqallv rrwtdapaep agvpagatgv
     1021 vlaataarre rltaaltgcg vgevtapetg tgpatvtspa dgtgpadeav advlpadgav
     1081 pdvlladept aeealglvqr llrarpgrpv rvlllhrhea ggarperaal gafartvrae
     1141 npllavqavg laegvdetaa laaelagdgr dpevahttgg rrvprpapap aaepaavrdg
     1201 gvyvvsggag glgravadwi laradarvvl lgrgeqppaa lgdrlsyrta dvsdpaaver
     1261 vlaavrtelg pvngvvhaag vlrdgfaltk saddfaavla pkvsgvrald aataddpldf
     1321 fvafssiaah igsagqtdya yanayldaya erhpritsva wpmwagggmr qtaeaaadia
     1381 artgfgvlpt gaglalferv lgvpgafvaa hgdleridga lserapavrv patteatgas
     1441 gtaepralav tllrtliaae tgldpaelge ddpferhgid sltitklnre lgkrfdrlsk
     1501 tlffeyatlg elagyfaehh gaelrgaaga getggtaaap spaaspagtp prpsrtarta
     1561 rtahaarsaa pssppeedgd aiavigiagr ypladdleef wanltqardc vteipadrwd
     1621 htrwydpdpa apgrahtrwg gflrdvdrfd plffgisprq aelmdpqerl flqnawhvme
     1681 dagyrradla grpvgvyvgv mygeyqfhga ldalrggrpl tgssfatian rvshalnlsg
     1741 psmaldtmcs ssltaihlac eslrrgesel alaggvnvsv hpykyaflsq grflssdgrc
     1801 rafgaggdgy vpgegvgavl lkpyrralad gdrvhglilg savnhgartn gytvpsphaq
     1861 qravtaamaq agvapdgigy veahgtgtal gdpieltglg hayrgagagp gtwpigsvks
     1921 nvghlesaag magltkvllq fahrtlvpsl haeelnpnid ferspfrvqr dladwpagad
     1981 tprraglssf gaggsnahlv lqesprpepv adapaarqht gepvafvlsa rdgerlraha
     2041 eraarflete rvpladlcft sqtgreamda rfavvatdge aivaalrrca agepqapitd
     2101 dgplgdlarr wltgpdvdwr awhagrpgpa prrtraplyp faperywipl dpdlgtpaph
     2161 plvdanestv devrfakrlr pgdpllrdhv vggrrllaga atlefvraaa hlarpgvrhd
     2221 lrevvwgrav evaegertvy vsfrpdgdal lfevygedgg ersahargra vpapaaapaa
     2281 aedldalrar lpvlrdraga yadytaagfg ygpsfqvide iragsgealv rldagaggpa
     2341 tevppalldg alrachwagr ttapragela vpfslgaldv raplppvcla harrtgkaag
     2401 asrfdltvyd ergrvlaelr dfagrpptpa tapasiaasa sasgsgaatm pasatvstsa
     2461 sasassvpgs vsapatvtvp gttgpqasga vsvtgaavpa ggaavlyepy wqdagepaqg
     2521 saadtlavlg rhpelqaala atgvwrrvvn vpedpgalad alaglahpgg ldlavagglt
     2581 apapapdagd paglldrvcg tvlqvlgaar sdelpgrvrl lvlhpqdggh drpewaalag
     2641 farstaptap rlelltlgvd pglaadaaae avvaelravp raaglearrt angarqvral
     2701 rpvrpsgaae pplrdggvyv vtggggaigr vlaehlarah aarlvligrs epddaardwh
     2761 rtlaglgaev lalradvarh gelaaalaaa rdrfgaphgv fhlagvadeg radpadrerf
     2821 arvlaakthg lvhldrltrd ddldcfvvfs svssvigdfg aasyatanrf adlytglrdg
     2881 wtrqglrhgr slslawplwa vggvdglvre qelaayarrt gmrpldaaqg tallhsalra
     2941 gaswlipawg epaaldaalt gapaapaatp aaaatntppt pvgaapaapa gpaaddrvra
     3001 rlvehlrtal agvlklpvgr ldsriplddy gmdsvlvmes nsllgrdfpg lrgtvffecr
     3061 tvdeladhvl aehadavarl fpadtavdta adtgggagta aatapapsat apapsatapa
     3121 psvtgpapap gsrpgraepv paadepiavv gisgrypkar dldefwsnla egrdcvtevp
     3181 asrwdadalf dpdpaapgrs yarwggfldd vdsfdslffr ispkqartmd pqerlfleta
     3241 wsalenagyp psripaprfg gqghdvgvfv gvmwddyavl aatesargnh qvvlanrasi
     3301 anqvsyfgdf rgpsvvvdta csaslvavhq acesirrgec syalaggvnv svhpdkyvhl
     3361 shrnmlstdg rcrafgaggs gyvpgegvga vllkrlsdav rdgdtvhavi ratavnhggr
     3421 tsgftvpnpq aqqalveqal aaagidartv gcveahgtgt slgdpiehta laqafardta
     3481 dtgfcalgsv ksaighlega agiagltkav lqlrngtllp tlhaeetnpv idftrspftv
     3541 qretrpwprp ydadgrplpr raavssfgag gtnahvvvee ylapepadag paeaatpgli
     3601 vlsardetrl rayatamgla lgtaaradqg aprladvsht lrtgreplpe rlafvaadla
     3661 daaaaltafg rgeddqrlhr grveqhpala glltetvggd dflaaqirag gddllarlwv
     3721 sgvivdwelv drmrpgtprr vplptypfer vrhwldtgpa tpaaapaagt aapararvpa
     3781 prdpapaaap dapapaavsg apapaasrvw rrrltadqpv lrdhvvggrp vlpgtghldl
     3841 vaeahgaltg raltdvrwva pltlpgsgge vsvaldgdgd gsgyevrgpd gavrsrgrvg
     3901 vaqdapgald vaglrarlda gpdgdafyrl ledlglpygp ffrrvrevwt gdeevlgrig
     3961 avdgdvshal hpgvidaalh tvaalmarqg pgrtmlpfaa drvdvlgpvp rtgwshvrrt
     4021 gadrydvllc ddsgavrvrf tslayreare pavvvhrpvw tarpadgrae parsvllvae
     4081 rpdtglaadl aaahtgaevr rltvgadgla daeldralre sapdlvyflg aeegaghepa
     4141 grpglralid rsvlalhrlv raldrhgvla rplrlkvvta dvhpleagda sapwaaglag
     4201 lasvaakeyp nlrvalvdvr saeapgtara vvaepfparp apvsiragvr rvrtlervel
     4261 pgaaaaplrq ggvylvvggl gavgrdtcrh laraygaklv vvgrspldet rrrvvaelek
     4321 dgaevrhlal dagdpaalag avrlarqefg alhgvfhaam vlvnrelrel sepelrsave
     4381 sktdtafall davrgepldf alfyssgvaf eanhgqagya agcafadaya lhagrrlpfp
     4441 vrvlnlgywh aggdaererv lrrfeaagir pltaergmtv meralaaglp qvfaldaerh
     4501 ildnlgidpd rtltvlpglp gggpgplpei rftgltgadg aelaehqrav dlleglahrl
     4561 lasalrragl felftpgara pghaelaagl rvvpehlavf eaqlailvta glldadadgg
     4621 lrptdraard dadaaaalqe ltdrhpalap igsllrdcla alpevltgrr pamdvlfpdg
     4681 saervaavyr gdpvtdrcna evarlvterv rdllaagtgr pvrilevgag tggttatvla
     4741 alapyagsve yvftdvspaf vrkararfga ahpfarfevl dieagaeeqg vepgaydvvl
     4801 gtnvfhatqh lagtllraka llrrggvllm vegtrprdql alvfgltpgw wlfadpeqrl
     4861 prsplaserq wrdalaacgf tgiaaaapat eagpafqsvi aavsdglvpv prpqaaaaag
     4921 rpaggpvpep artpapapap asaagragvd delrkvtevf arvlelapdr ldpdltfeny
     4981 gvdslvvlel tralegvygp qpatllferi tvrrlaehfh tlaakdtgpa pqptadpape
     5041 rtadpgptrt aepapartad pepeagarsa gpaaaevrpv papagtaahg papvpgpata
     5101 paddagrlve glsdaavdel lavllaergk fegdgr
//
LOCUS       WP_235902576             295 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfocyanin-like copper-binding protein [Streptomyces sp. 1-11].
ACCESSION   WP_235902576
VERSION     WP_235902576.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. 1-11
  ORGANISM  Streptomyces sp. 1-11
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 295)
  AUTHORS   Komorowski,L. and Schafer,G.
  TITLE     Sulfocyanin and subunit II, two copper proteins with novel
            features, provide new insight into the archaeal SoxM oxidase
            supercomplex
  JOURNAL   FEBS Lett 487 (3), 351-355 (2001)
   PUBMED   11163357
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018257.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06525.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Streptomyces sp. 1-11"
                     /db_xref="taxon:2590549"
     Protein         1..295
                     /product="sulfocyanin-like copper-binding protein"
                     /GO_function="GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=30289
     Region          2..81
                     /region_name="SHOCT"
                     /note="Short C-terminal domain; cl26592"
                     /db_xref="CDD:474824"
     Region          <193..294
                     /region_name="COG4454"
                     /note="Uncharacterized copper-binding protein,
                     cupredoxin-like subfamily [General function prediction
                     only]"
                     /db_xref="CDD:443552"
ORIGIN      
        1 mwfgdgwgwa grflmtvttv lvwavliagl aalvrhltga rhqrpgpppr pgdggggwqa
       61 pgagnppaer fargeieede yatsaraasg atanprsrrg vwpaiavfas alvlglastg
      121 lmaasgafhr pppaswraqg arcgapaarg savdvtvwda grmmhgpnrl apdstrpgpr
      181 gtgmmrlvah pttvpagrtt vrvfnagtvt hevvvlplap gravgeravg sdgrvseags
      241 rgeasrtcgs gagegiapga aawttvtlrp gryelvcnip ghyaagmyte ldvtr
//
LOCUS       WP_235902086             446 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome c3 family protein [Alcanivorax sediminis].
ACCESSION   WP_235902086
VERSION     WP_235902086.1
KEYWORDS    RefSeq.
SOURCE      Alcanivorax sediminis
  ORGANISM  Alcanivorax sediminis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Alcanivoracaceae; Alcanivorax.
REFERENCE   1  (residues 1 to 446)
  AUTHORS   Leys,D., Meyer,T.E., Tsapin,A.S., Nealson,K.H., Cusanovich,M.A. and
            Van Beeumen,J.J.
  TITLE     Crystal structures at atomic resolution reveal the novel concept of
            'electron-harvesting' as a role for the small tetraheme cytochrome
            c
  JOURNAL   J Biol Chem 277 (38), 35703-35711 (2002)
   PUBMED   12080059
REFERENCE   2  (residues 1 to 446)
  AUTHORS   Gordon,E.H., Pike,A.D., Hill,A.E., Cuthbertson,P.M., Chapman,S.K.
            and Reid,G.A.
  TITLE     Identification and characterization of a novel cytochrome c(3) from
            Shewanella frigidimarina that is involved in Fe(III) respiration
  JOURNAL   Biochem J 349 (Pt 1), 153-158 (2000)
   PUBMED   10861223
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025890.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14537.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Alcanivorax sediminis"
                     /db_xref="taxon:2663008"
     Protein         1..446
                     /product="cytochrome c3 family protein"
                     /calculated_mol_wt=49155
     Region          <73..>272
                     /region_name="Cytochrom_C552"
                     /note="Cytochrome c552; pfam02335"
                     /db_xref="CDD:426726"
     Region          <224..>266
                     /region_name="NrfA-like"
                     /note="cytochrome c nitrite reductase and similar
                     proteins; cl42459"
                     /db_xref="CDD:478214"
     Region          230..328
                     /region_name="Cytochrom_C3"
                     /note="Heme-binding domain of the class III cytochrome C
                     family and related proteins; cl23752"
                     /db_xref="CDD:474044"
     Site            order(231,238,241..243,257,294,304,307..308,323,326..327)
                     /site_type="other"
                     /note="heme-binding residues [chemical binding]"
                     /db_xref="CDD:173979"
     Region          <356..>400
                     /region_name="NrfA-like"
                     /note="cytochrome c nitrite reductase and similar
                     proteins; cl42459"
                     /db_xref="CDD:478214"
ORIGIN      
        1 mmgsakrnpv lwaiwlvasl alaiwlslql vdeeapktaf lpgpmthghh qiemqcsvch
       61 gdgfdsettl qnacvdchge qlddaqdshp kskftnprna drlanvdarl cvschvehrp
      121 eldvgmgvtl pmdmcahche diekdrpshe gmgfdtcana gchnfhdnra lyedfllaha
      181 gepwlkqpaq qaprdllarq mrdedlmalm rghgeapada avpehwdgsa hadagvacta
      241 chgggdnwvd spepqqcatc hepehegflq grhgmrlaqg lspmtpsqsv lnmhveashr
      301 eltcischga hdfdtqkaav dscigchnde hsnqylrsph halwkqekrg elppgsgvtc
      361 atchmpreek hgeifvqhnq sltmrpvekm arpvclqchs lefsldalad phllennfkg
      421 qpekhvpsid mavdrdkarg dkkgpy
//
LOCUS       WP_235902622             530 aa            linear   BCT 02-MAR-2025
DEFINITION  M28 family peptidase [Sandarakinorhabdus oryzae].
ACCESSION   WP_235902622
VERSION     WP_235902622.1
KEYWORDS    RefSeq.
SOURCE      Sandarakinorhabdus oryzae
  ORGANISM  Sandarakinorhabdus oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandarakinorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016289.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04389.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Sandarakinorhabdus oryzae"
                     /db_xref="taxon:2675220"
     Protein         1..530
                     /product="M28 family peptidase"
                     /calculated_mol_wt=55833
     Region          103..229
                     /region_name="PA"
                     /note="Protease-associated (PA) domain. The PA domain is
                     an insert domain in a diverse fraction of proteases. The
                     significance of the PA domain to many of the proteins in
                     which it is inserted is undetermined. It may be a
                     protein-protein interaction domain. At...; cl28883"
                     /db_xref="CDD:333703"
     Site            189..191
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:240124"
     Region          271..508
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mrnlgllvav latpavaapq fsaeafkahv sfladdllag rdtgspghei asryvvaqls
       61 aagvtpagad gswyqpvrlr eatlvpgsaa fsidanraad davvvganml aenlslsapv
      121 vfaghclvep slkiddfrgl dvkgkivacl tgfpkglpse taayltdqra rfvaargaig
      181 mislwgkade arrpfasvir dssnprmqrl npdgspfmfa pglrgaavls tavarqlfag
      241 arrsfdavda egqtrsvrgf alpspvtits qsrwrtitsh nvvgmvkgsd palaeqivvl
      301 gahldhigtg tpingdainn galdnaagsa tlievakata anppkrsvlf vaataeekgl
      361 lgaeafaanp tvdrsrivsm idldmpilty dfrdvtayga dhstiaadva aaagemgval
      421 apdplpeeti fvrsdhyafv qrgipaimls tgfggdgkaa wmdflanhyh qpsddlklpi
      481 rwqqgarfae lnwrimdrla naatpprwyk gdffgdrfap tadkapppar
//
LOCUS       WP_235902350             124 aa            linear   BCT 02-MAR-2025
DEFINITION  respiratory nitrate reductase subunit gamma [Streptomyces sp.
            ATE26].
ACCESSION   WP_235902350
VERSION     WP_235902350.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. ATE26
  ORGANISM  Streptomyces sp. ATE26
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 124)
  AUTHORS   Pantel,I., Lindgren,P.E., Neubauer,H. and Gotz,F.
  TITLE     Identification and characterization of the Staphylococcus carnosus
            nitrate reductase operon
  JOURNAL   Mol Gen Genet 259 (1), 105-114 (1998)
   PUBMED   9738886
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014695.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02665.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Streptomyces sp. ATE26"
                     /db_xref="taxon:2954237"
     Protein         1..124
                     /product="respiratory nitrate reductase subunit gamma"
                     /calculated_mol_wt=13732
     Region          <2..107
                     /region_name="Nitrate_red_gam"
                     /note="Nitrate reductase gamma subunit; cl00959"
                     /db_xref="CDD:470013"
ORIGIN      
        1 mfsattrndk amyvsltatl alglaatvda niagggynyr etvspwfrsv favqpdphlm
       61 sgapllyrlh aisamllfaa wpftrlvhml tapigyltrp yivyrsrdtr lgtraprrgw
      121 erig
//
LOCUS       WP_235902643             477 aa            linear   BCT 02-MAR-2025
DEFINITION  pre-peptidase C-terminal domain-containing protein [Streptomyces
            sp. 1-11].
ACCESSION   WP_235902643
VERSION     WP_235902643.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. 1-11
  ORGANISM  Streptomyces sp. 1-11
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 477)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016071.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04151.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Streptomyces sp. 1-11"
                     /db_xref="taxon:2590549"
     Protein         1..477
                     /product="pre-peptidase C-terminal domain-containing
                     protein"
                     /calculated_mol_wt=48732
     Region          <109..323
                     /region_name="CphB"
                     /note="Cyanophycinase and related exopeptidases [Secondary
                     metabolites biosynthesis, transport and catabolism,
                     General function prediction only]; COG4242"
                     /db_xref="CDD:443384"
     Region          391..457
                     /region_name="PPC"
                     /note="Bacterial pre-peptidase C-terminal domain;
                     pfam04151"
                     /db_xref="CDD:427748"
ORIGIN      
        1 mtsralsrpl asllviaaaa atlagtsgpa qasadrirlg sasdvsrpsw sgpaftmngd
       61 gsvvggsmtk aidairggtg sldvvvlags aptsgsktpe cdtitslsgv nscttwtlta
      121 asdgnntqln tdirnaefvy faggdqcrya awkgtalqas vqsvvakggg sgggsaglhi
      181 nssivydact asatsaaala dpydksvtft tgmfnwpnyg dtindshfva rdrmgrtmaf
      241 varalkdglt tqgkawgvgi deggsslyid knglatlygs dayvvlgdhq pekavagqpl
      301 tfsgykiwhl tggqtfdfkn rptcgyyrrs vtdgvadpnl yngtpetgcg tsgggttlne
      361 sepndsrsaa dditastlpv tvtgalstts drdyfkftla sgktatisca ipdaydaday
      421 lldsagatlt rsvndgrgsd ealtytrtas gsgtyyldle ayagsgsaty acdlnaa
//
LOCUS       WP_235902655              76 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: TrkA C-terminal domain-containing protein
            [unclassified Streptomyces].
ACCESSION   WP_235902655
VERSION     WP_235902655.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 76)
  AUTHORS   Anantharaman,V., Koonin,E.V. and Aravind,L.
  TITLE     Regulatory potential, phyletic distribution and evolution of
            ancient, intracellular small-molecule-binding domains
  JOURNAL   J Mol Biol 307 (5), 1271-1292 (2001)
   PUBMED   11292341
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014171.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02080.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..76
                     /product="TrkA C-terminal domain-containing protein"
                     /GO_function="GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0006813 - potassium ion transport
                     [Evidence IEA]"
                     /calculated_mol_wt=7575
     Region          <13..76
                     /region_name="NhaP2"
                     /note="NhaP-type Na+/H+ and K+/H+ antiporter with
                     C-terminal TrkAC and CorC domains [Energy production and
                     conversion, Inorganic ion transport and metabolism];
                     COG3263"
                     /db_xref="CDD:442494"
ORIGIN      
        1 msperarqgt talhdggpaa gagtteialp agtvvatvvr ggqptvpgpe vrllpgdell
       61 lvsheateqe ihaafq
//
LOCUS       WP_235902687             812 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin acylase family protein [Sandarakinorhabdus oryzae].
ACCESSION   WP_235902687
VERSION     WP_235902687.1
KEYWORDS    RefSeq.
SOURCE      Sandarakinorhabdus oryzae
  ORGANISM  Sandarakinorhabdus oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandarakinorhabdus.
REFERENCE   1  (residues 1 to 812)
  AUTHORS   Verhaert,R.M., Riemens,A.M., van der Laan,J.M., van Duin,J. and
            Quax,W.J.
  TITLE     Molecular cloning and analysis of the gene encoding the
            thermostable penicillin G acylase from Alcaligenes faecalis
  JOURNAL   Appl Environ Microbiol 63 (9), 3412-3418 (1997)
   PUBMED   9292993
REFERENCE   2  (residues 1 to 812)
  AUTHORS   Duggleby,H.J., Tolley,S.P., Hill,C.P., Dodson,E.J., Dodson,G. and
            Moody,P.C.
  TITLE     Penicillin acylase has a single-amino-acid catalytic centre
  JOURNAL   Nature 373 (6511), 264-268 (1995)
   PUBMED   7816145
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013927.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01804.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Sandarakinorhabdus oryzae"
                     /db_xref="taxon:2675220"
     Protein         1..812
                     /product="penicillin acylase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /GO_process="GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=88242
     Region          29..804
                     /region_name="PvdQ"
                     /note="Acyl-homoserine lactone (AHL) acylase PvdQ
                     [Secondary metabolites biosynthesis, transport and
                     catabolism]; COG2366"
                     /db_xref="CDD:441933"
ORIGIN      
        1 magggmgsgr svrvmlgvag lalfapsala epvtihrdam gvphvfaqts aavmfgagya
       61 laqdrlaame lqrrgaagrr aeivgasala gdrtardrrl pdaellrmyh aipaehqamm
      121 layvdginra vaevmadper ktplefirwg irptpwtlld ylgyiasvpg grdaheianl
      181 aflnamikrh geragwqifn dvvpvsdpds ptviapgedr aparlvpvdr pvslkaggvd
      241 lsaspaapap aeppqgasrc lvigpqksas grvlmleata dgpeihlrgg gfdqagfsfn
      301 aygppfmgrg vqhgwlltsg vaqansvfae klnpknrlqy wfkgswrdme hrteiilvkg
      361 aapvthevar tvhgpviqwd sanniafshs famrgreidn wvgivemgra rsidefeakg
      421 vnrmgwnlgi cyggadgqig fweagnlpkl pagvdprlpi pgtgdhelqg yltpaeqphv
      481 rnpkqaylha wnskattwsp egtearngaa frtwagnsla asaraitlld mrafnaaifs
      541 amgasdrtqt qpaffapyir aamaasndae vreagalmls fdgyyadrda dqrydnaglt
      601 lfrqwltvap amifgdsigd wwrrvdddry lryqtslllr alqgekagap lafdwfhrrd
      661 rnqllaasik atveqlrtef pgkamaewkw pifwkyydpa aqrpdrpvlp ddpdpprlsa
      721 vlklgpvmap hnggegwvgl meidpdhpal ysvvdaggqs lfidpqgkgn phltdqtmmh
      781 esnelkkiem apdavragav stlvidyvrg rp
//
LOCUS       WP_235902691             167 aa            linear   BCT 02-MAR-2025
DEFINITION  FKBP-type peptidyl-prolyl cis-trans isomerase [Sandarakinorhabdus
            oryzae].
ACCESSION   WP_235902691
VERSION     WP_235902691.1
KEYWORDS    RefSeq.
SOURCE      Sandarakinorhabdus oryzae
  ORGANISM  Sandarakinorhabdus oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandarakinorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012478.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00254.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Sandarakinorhabdus oryzae"
                     /db_xref="taxon:2675220"
     Protein         1..167
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /EC_number="5.2.1.8"
                     /GO_function="GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /calculated_mol_wt=17171
     Region          <32..66
                     /region_name="FKBP_N"
                     /note="Domain amino terminal to FKBP-type peptidyl-prolyl
                     isomerase; pfam01346"
                     /db_xref="CDD:460169"
     Region          62..163
                     /region_name="FkpA"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG0545"
                     /db_xref="CDD:440311"
ORIGIN      
        1 mnsaggvgig kwlaagavvi gvvgllvytg tqsqvaavrt admkylaqnk dkpgvvttas
       61 glqynvirag qgpkpaakdt vlvhyegrlv dgtvfdssyq rgqpaafpld qvipgwtegv
      121 qlmpvgskyh fvvppqlayg aqgaggvipp gavlefdiel lavkpaq
//
LOCUS       WP_235902744             747 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: SpoIIE family protein phosphatase [unclassified
            Streptomyces].
ACCESSION   WP_235902744
VERSION     WP_235902744.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 747)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..747
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=79730
     Region          46..141
                     /region_name="PAS_4"
                     /note="PAS fold; pfam08448"
                     /db_xref="CDD:312075"
     Region          154..337
                     /region_name="PtsP"
                     /note="Signal transduction protein containing GAF and PtsI
                     domains [Signal transduction mechanisms]; COG3605"
                     /db_xref="CDD:442824"
     Region          295..729
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
ORIGIN      
        1 mtaerersst sevrrsgevr dtdedlsmlf gtstalfasm agpahvleaa npafftaige
       61 grrertgvpl aelmpelpaq gfialldqvf rtgtrhvgrd arvligpgde areayfdfty
      121 earrdaggnv igvrmigvet thvkharrla aeqralleqi arqaplsdvl dgmcrsieel
      181 spevivsvll adedgrhlrh gaapslpdfy nraidgiatg egmgscgtag hrrrtvivtd
      241 iaadplwdef rglagragla acwstpilgr deqllgtfam yhrtprapqd tdlalarvia
      301 dtaalaierh raeqarlaad arekaarddl afllaastal sgqlderqvl qrlatlsspv
      361 laplaavdvl esgrvhrvaa aapaddaral laahvpardd eddavarvla sgltevarrt
      421 ptgpgpwrel dvtgyvcvpl ldrgrpfgal tllatdahpf dghrvalaee larraasaar
      481 narqyeqsaa lardlqtgll lpdlpeipga rlaafyhpag egleiggdfy dvfprgdgsw
      541 afilgdvcgr gakaatttal vrhtaravap llddpvdvvk avdkalndry ahqnngfvtl
      601 vhghlaptad glavhlvrag htlpllldtd hrvdtveapg gllgigippr laarrftlrp
      661 geslflytdg itecrteese qygevrlaka lasvprrpga adiveavaed vrryvaganv
      721 eddqaalvit adeppacrdr adgtgrg
//
LOCUS       WP_235902786             766 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase domain-containing protein [Streptomyces sp.
            1-11].
ACCESSION   WP_235902786
VERSION     WP_235902786.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. 1-11
  ORGANISM  Streptomyces sp. 1-11
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 766)
  AUTHORS   Dang,G., Chen,L., Li,Z., Deng,X., Cui,Y., Cao,J., Yu,S., Pang,H.
            and Liu,S.
  TITLE     Expression, Purification and Characterisation of Secreted Esterase
            Rv2525c from Mycobacterium tuberculosis
  JOURNAL   Appl Biochem Biotechnol 176 (1), 1-12 (2015)
   PUBMED   25869294
REFERENCE   2  (residues 1 to 766)
  AUTHORS   Bellinzoni,M., Haouz,A., Miras,I., Magnet,S., Andre-Leroux,G.,
            Mukherjee,R., Shepard,W., Cole,S.T. and Alzari,P.M.
  TITLE     Structural studies suggest a peptidoglycan hydrolase function for
            the Mycobacterium tuberculosis Tat-secreted protein Rv2525c
  JOURNAL   J Struct Biol 188 (2), 156-164 (2014)
   PUBMED   25260828
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08924.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Streptomyces sp. 1-11"
                     /db_xref="taxon:2590549"
     Protein         1..766
                     /product="glycoside hydrolase domain-containing protein"
                     /calculated_mol_wt=83285
     Region          244..455
                     /region_name="GH25_BacA-like"
                     /note="BacA is a bacterial lysin from Enterococcus
                     faecalis that degrades bacterial cell walls by catalyzing
                     the hydrolysis of 1,4-beta-linkages between
                     N-acetylmuramic acid and N-acetyl-D-glucosamine residues.
                     BacA is homologous to the YbfG and YkuG lysins of...;
                     cd06418"
                     /db_xref="CDD:119380"
     Site            order(259,283,314,316,355,357,392,411,432,451)
                     /site_type="active"
                     /db_xref="CDD:119380"
ORIGIN      
        1 malqhelgis pvvasfgptt askfaalgdi gfewdtnrni vaileyalwc kgywavepgs
       61 egwftgvtrd avaklrsnmg iggegvinvq vakalmnmda yvvvaggtdg ireiqqwlng
      121 rywtrsaysi gpcdgiysrd vqkslmialq yelgiaapng nfgpatqagl qshtltqgss
      181 gvfvqlfsai clfnsptyds dgndvnttwr ssydsgltqw vqlfqrfnkl tangngdyet
      241 waqllvsmgd pdravtgsdt ryeitssrak wlfdngyrfv gryiydppgs tldkeikpge
      301 ldvifgaglk vfpiyqdnar rladftytng yshglnahkc asdygfnrgt tiyfavdyda
      361 tgeeiassiv pyfhgvqaal asqgkkythg vygsrnvcst vsnktfarys fisgmsygfs
      421 gnlgfpiprn wtfnqikefh vtngsdgfdl dndavsgldr gvssvsdagg paddfiayvq
      481 klydlagsyg asgqkrsqlv meyirhhsyg dkdlankvgw wyligsydsg fvdycnsngm
      541 svkalftdpf tgyqlgaehm matanahllt aqpdnkksan ggdvggwagd lmtfwadwrn
      601 seqeyadplq fahaklavpg vnssfgfndl iedadgylla ravnggktiv davrdhyngg
      661 gglkrfndyf tnrwgnatdc ktsahnalta vdatlsvaql qlitlagvvs psdyqnlpgg
      721 gdklsnfeqg fvdallarmg tetaklslyq anhekylkaa rsraaq
//
LOCUS       WP_235902794              92 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3572 family protein [Sandarakinorhabdus oryzae].
ACCESSION   WP_235902794
VERSION     WP_235902794.1
KEYWORDS    RefSeq.
SOURCE      Sandarakinorhabdus oryzae
  ORGANISM  Sandarakinorhabdus oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandarakinorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023518.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12096.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Sandarakinorhabdus oryzae"
                     /db_xref="taxon:2675220"
     Protein         1..92
                     /product="DUF3572 family protein"
                     /calculated_mol_wt=9378
     Region          9..89
                     /region_name="DUF3572"
                     /note="Protein of unknown function (DUF3572); pfam12096"
                     /db_xref="CDD:432328"
ORIGIN      
        1 mlrdkpssad pavlalqala hvagdeamgp rflaltgmda dalranagkp atltalldyl
       61 manehdlvat aeaigvkpea lalaarklgs dw
//
LOCUS       WP_235902801             817 aa            linear   BCT 02-MAR-2025
DEFINITION  SpoIIE family protein phosphatase [Streptomyces sp. ATE26].
ACCESSION   WP_235902801
VERSION     WP_235902801.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. ATE26
  ORGANISM  Streptomyces sp. ATE26
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 817)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Streptomyces sp. ATE26"
                     /db_xref="taxon:2954237"
     Protein         1..817
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=86887
     Region          <34..120
                     /region_name="AmiR"
                     /note="Two-component response regulator, AmiR/NasT family,
                     consists of REC and RNA-binding antiterminator (ANTAR)
                     domains [Signal transduction mechanisms, Transcription];
                     COG3707"
                     /db_xref="CDD:442921"
     Region          384..815
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
ORIGIN      
        1 mepsgltgva epsaltgvve psgptgagef pgpaqetgpg apvttpvgrl aatverlrge
       61 vraaqaeaeg rallelakgi lverlgcgpa qaarqlaelt eqarmtplef avevinqaar
      121 drvsevakaf laatadpvap eedsaavrlr aaesgalaad dtqavadsll qhalrplgav
      181 avavwaagsd gsltlagsag fpqaeadrwr yvppdvatva rrgltepggq wltslaesgl
      241 ptigrrdfae garvavpaga ggrihgvlei awpgpegprp pqvvrqleal aelcahtles
      301 hpllpgpqdt rvlpdvvelm dladglhdpa lvlvphldet grlvdfriqh vnsrfmdpag
      361 rpravvggal lleaypmaag snelfqrver vyatgepfra hrmrltalvd qvplsafadi
      421 sisrhgttvl liwriedeta rlasllqhaq rlgriggfee nlltaeitwn gqlfdlygrp
      481 ptsppvpled laahahpdda vgigrflrtl vhhrrpasva frlqrpegvt rhvrvvaepv
      541 ldtdgqllvv rgayqdisaq hwtevalaat rdqlahteqq adernrlalq lqhaimppah
      601 aplevpdlqv avryrpaete hlvggdwyda vvlpsglvll cvgdvaghgi eaatsmvvlr
      661 nalrglavtg agpaqllswl nivahhltga vtatavcgly dgerrtlrwa raghlppvlv
      721 rdgeasampt lkglllgavp davyeetemq laagdtllmy tdglierrdr svqeslshll
      781 smarsapggl dqhldrllth srsdtdddtc ivglrla
//
LOCUS       WP_235902926             515 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Sandarakinorhabdus oryzae].
ACCESSION   WP_235902926
VERSION     WP_235902926.1
KEYWORDS    RefSeq.
SOURCE      Sandarakinorhabdus oryzae
  ORGANISM  Sandarakinorhabdus oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandarakinorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Sandarakinorhabdus oryzae"
                     /db_xref="taxon:2675220"
     Protein         1..515
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=54047
     Region          93..481
                     /region_name="2A0115"
                     /note="benzoate transport; TIGR00895"
                     /db_xref="CDD:273327"
ORIGIN      
        1 mtsrgeklsi vgdrapifwa gcaaisagvl lhlpmlamah smgnhlagmp mdsgmwlgmg
       61 liligvplac fgalprhrta hgdhagtnfe apdstplnrw haatllvltl gliidvmkpa
      121 tlgfvlpgma aeygmpksqv allplvaltg ttvgsflwgw ladvygrrvs illstilfvs
      181 taicgampaf twnlvmcflm gtsaggmlpv iytllaevmp prhrswvlvl vggtglvggy
      241 laasgaalvl epvygwrvlw lqgfpsgill lalarfipet prflaesgrl aelaqmqrrf
      301 glapkprpaq ppadtpssat hhritaalvm talcwsfvnf glllwlpsdl qargysaava
      361 sgilaksslf afptvlfaaw fyaqrsskwt lvgtvgltli gligallpad llsqqpvlit
      421 viallivgtn gtiavllpyt aenfplgtrg ratglvagss kfggvavqia alagfaptlv
      481 gaavallipt aasaamiawf gretrgrslr eleae
//
LOCUS       WP_235902931             791 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: SpoIIE family protein phosphatase [unclassified
            Streptomyces].
ACCESSION   WP_235902931
VERSION     WP_235902931.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 791)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..791
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=83358
     Region          168..251
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cl21578"
                     /db_xref="CDD:473914"
     Region          241..660
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
     Region          670..785
                     /region_name="RsbW"
                     /note="Anti-sigma regulatory factor (Ser/Thr protein
                     kinase) [Signal transduction mechanisms]; COG2172"
                     /db_xref="CDD:441775"
ORIGIN      
        1 masppapdrl rrvleqalvf agaslagvyt pgddpavlll aesaglprtl yglrdsypvp
       61 gahpvaeahr tgrarwlgpa eladcpearr tpspefslaa lplglagggc llavsehpgg
      121 fgaddracle liarmvaapa pvaagetgel padafslamd sgrvqagdai lrlfgisrda
      181 fdgrvetllg havpedlpal msvveadhls igdrelefrv lqpagpprwl rlrgrllpgg
      241 egrparlvgt vadastqrag ltdvarvqrl aaalatagtv kdvghavvda lrrplradri
      301 alaelendrl vvtvldppep eawpevwrse wrtewpdapv rsmptlatal ragrariwpa
      361 gsalepalae vgpgglavlp lpagdrmaga cligwdrphd fgpderallt acagltgqal
      421 lrahafdaeh elvgmlqrtl lprrlprlpg gaavarylpt taglevggdw ydvipladnh
      481 vafvigdvqg hnagaatlmg qmrtalraya aeghspdvvv ahanrllldm etdlfatcay
      541 vdvdmeqgta lcvraghlqp vlrhpdgtte ivqaeggppl gvlgqaefpm tplrlqpgtv
      601 lalttdglve spdsdidegm drlagelaaa dpghlglvad allagahrgd dvalllmryd
      661 gmavrplres wtvwrvpeav rharrftrrt lrtwgvrpet veaallvvse lvtnalvhtg
      721 gpvrldlslv ghrlrlavad tsprspvqpt sigweatggr gillvqavsa awgtvpvsgg
      781 kqvwadlvpp g
//
LOCUS       WP_235902985             234 aa            linear   BCT 02-MAR-2025
DEFINITION  phage baseplate assembly protein V [Sandarakinorhabdus oryzae].
ACCESSION   WP_235902985
VERSION     WP_235902985.1
KEYWORDS    RefSeq.
SOURCE      Sandarakinorhabdus oryzae
  ORGANISM  Sandarakinorhabdus oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandarakinorhabdus.
REFERENCE   1  (residues 1 to 234)
  AUTHORS   Filloux,A.
  TITLE     The rise of the Type VI secretion system
  JOURNAL   F1000Prime Rep 5, 52 (2013)
   PUBMED   24381728
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 234)
  AUTHORS   Browning,C., Shneider,M.M., Bowman,V.D., Schwarzer,D. and
            Leiman,P.G.
  TITLE     Phage pierces the host cell membrane with the iron-loaded spike
  JOURNAL   Structure 20 (2), 326-339 (2012)
   PUBMED   22325780
REFERENCE   3  (residues 1 to 234)
  AUTHORS   Haggard-Ljungquist,E., Jacobsen,E., Rishovd,S., Six,E.W.,
            Nilssen,O., Sunshine,M.G., Lindqvist,B.H., Kim,K.J., Barreiro,V.,
            Koonin,E.V. et al.
  TITLE     Bacteriophage P2: genes involved in baseplate assembly
  JOURNAL   Virology 213 (1), 109-121 (1995)
   PUBMED   7483254
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016595.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04717.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Sandarakinorhabdus oryzae"
                     /db_xref="taxon:2675220"
     Protein         1..234
                     /product="phage baseplate assembly protein V"
                     /calculated_mol_wt=24491
     Region          <11..188
                     /region_name="VgrG_rel"
                     /note="VgrG-related protein; NF033848"
                     /db_xref="CDD:468205"
ORIGIN      
        1 mspldaipmd raatgwggrw lgvmpavvan iqdpdgqgri qirlpwapda ggsqgyelwa
       61 rmatlfagsd rgswflpevd devlvafemg dprrpyilgg lwngqdsppq sasaannikq
      121 iksrngvait iddaqgqeql kletpggqki tlkdgpgait iedsngnsik letsgitita
      181 aakvtvnapq vdvsaglvkv dagmakfsgv vqcqtlittt ciattytpga gniw
//
LOCUS       WP_235903043             511 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: restriction endonuclease fold toxin-2
            domain-containing protein [unclassified Streptomyces].
ACCESSION   WP_235903043
VERSION     WP_235903043.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 511)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026982.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15646.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..511
                     /product="restriction endonuclease fold toxin-2
                     domain-containing protein"
                     /calculated_mol_wt=56058
     Region          383..504
                     /region_name="Tox-REase-2"
                     /note="Restriction endonuclease fold toxin 2; pfam15646"
                     /db_xref="CDD:373987"
ORIGIN      
        1 mdlrhqtanf vnaswsmvgl rdliyemlsl lftelsehgg magdndagra fakvhkeava
       61 tvfdksgfah qvmangagal lksseellkq eskiaaellg kspldmgiga qpsgpdcnpr
      121 ashnaqdlpe vvgetsgvdq yffnerflgq phklravakt wrqaskiled aywdseaawr
      181 tatleqtgea astvtgffek fvgknpppge vgehetlman lpvackmlan acdayadhie
      241 takrrlpyee tspldnlwpw eqpslggdgh dgglhelvag dmriaalgki ppaldsskar
      301 vpmpqpdsgg fvpglppllg pliriptlvp vayrpangpr vqpispeipp dprfpllkpg
      361 eqknfqtwln slrtgdfsgg rpaevayqmr vagypeyevp iptghsannt lmvdgfread
      421 gmaieakyvn kpnqrcyrsl delrmnhesg kkdflcrsdr delkkyaaal rdprnkemrg
      481 vetvtnnqea vqywrimmaa ygvkgharyi p
//
LOCUS       WP_235903056             374 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: S8 family serine peptidase [unclassified
            Streptomyces].
ACCESSION   WP_235903056
VERSION     WP_235903056.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..374
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=38104
     Region          1..362
                     /region_name="T7SS_mycosin"
                     /note="type VII secretion-associated serine protease
                     mycosin; TIGR03921"
                     /db_xref="CDD:274856"
ORIGIN      
        1 mkadqmwrvs tgegvkvavi dtgvnpntps lkgqvltgev pkavaykatd dfsghgttma
       61 eliagtgsgg glkglapgak ivpyrvdleg lpggkseekr tpkiaqaira aadtdakiis
      121 msfggfpype dekaikyaas kgklliaavg nsgrndkkdl idypaaypyv igvaaadksg
      181 tvskfsssgg yvdltapgeg fpgwcdttfr sycnregtsp ataltsaaaa liwsahpdwt
      241 vnqvvrslik tagrkeqsdk askyigygmv rprlvleeak ydpgpahedp lakenggdll
      301 akagtsaast apsssastps qapakgsags tpaagsaaes sdggntlwia lgavaavlvi
      361 gggwaavtra rrar
//
LOCUS       WP_235903272             316 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Bilifractor porci].
ACCESSION   WP_235903272
VERSION     WP_235903272.1
KEYWORDS    RefSeq.
SOURCE      Bilifractor porci
  ORGANISM  Bilifractor porci
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Bilifractor.
REFERENCE   1  (residues 1 to 316)
  AUTHORS   Gao,G., Nara,T., Nakajima-Shimada,J. and Aoki,T.
  TITLE     Novel organization and sequences of five genes encoding all six
            enzymes for de novo pyrimidine biosynthesis in Trypanosoma cruzi
  JOURNAL   J Mol Biol 285 (1), 149-161 (1999)
   PUBMED   9878395
REFERENCE   2  (residues 1 to 316)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
REFERENCE   3  (residues 1 to 316)
  AUTHORS   Nygaard,P., Duckert,P. and Saxild,H.H.
  TITLE     Role of adenine deaminase in purine salvage and nitrogen metabolism
            and characterization of the ade gene in Bacillus subtilis
  JOURNAL   J Bacteriol 178 (3), 846-853 (1996)
   PUBMED   8550522
REFERENCE   4  (residues 1 to 316)
  AUTHORS   Lollier,M., Jaquet,L., Nedeva,T., Lacroute,F., Potier,S. and
            Souciet,J.L.
  TITLE     As in Saccharomyces cerevisiae, aspartate transcarbamoylase is
            assembled on a multifunctional protein including a
            dihydroorotase-like cryptic domain in Schizosaccharomyces pombe
  JOURNAL   Curr Genet 28 (2), 138-149 (1995)
   PUBMED   8590465
REFERENCE   5  (residues 1 to 316)
  AUTHORS   Jabri,E., Carr,M.B., Hausinger,R.P. and Karplus,P.A.
  TITLE     The crystal structure of urease from Klebsiella aerogenes
  JOURNAL   Science 268 (5213), 998-1004 (1995)
   PUBMED   7754395
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01979.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Bilifractor porci"
                     /db_xref="taxon:2606636"
     Protein         1..316
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=34801
     Region          32..292
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
     Site            order(34,36,184,204,270)
                     /site_type="active"
                     /db_xref="CDD:238617"
ORIGIN      
        1 mtinhlqaac pengtevkkn sdeqasghaf gechahvfmn gtdyrlavsr neghpdigwi
       61 rhvfgeykkr gitfvreggd hygvslaakk lapefgityi spvfgifreg dygrvvgnsf
      121 rtmkeyaelv rrvkreggdf ikimttgimd fktvggltgt alpraeirem vhiaheegfr
      181 vmshtngaqa vidaveagvd svehgnfqne eslaclaess avyvptvvtv rnligdgrfd
      241 dtvirgiweg iqenlqigrr lgvqyalgsd agayrvlhgq gvedefrafr eafpedpdli
      301 rdlqageqki rswisg
//
LOCUS       WP_235903302             397 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Bilifractor porci].
ACCESSION   WP_235903302
VERSION     WP_235903302.1
KEYWORDS    RefSeq.
SOURCE      Bilifractor porci
  ORGANISM  Bilifractor porci
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Bilifractor.
REFERENCE   1  (residues 1 to 397)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Bilifractor porci"
                     /db_xref="taxon:2606636"
     Protein         1..397
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=42584
     Region          10..393
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mkeinkvcvs esrlvrefie ltaldspsfg erkmadclaa klrelgfave edrawekals
       61 eegivpegqk eagrsdragn lygflqgtip gqpvlfsahm dtvepskgkk aflepdgtih
      121 sdgttvlgad dvaglveile giravlesgn phrdievlfp iaeelytvgt ssmteeefgk
      181 irakeayvpd msgmpgtaan rapslisfra tvtgrashag fepekgihai qaaaeavtki
      241 kmghideett cnigviqggs gtnivpeect aegeirsyvh ekalacldrv teifrqtaes
      301 fgasadvryt vhlhayetgm esvpvrrfrr vcrslgltgd itstfggsdn ntfaehgieg
      361 lvlscgmyqa hsvkeytrta dlaagaklia glildse
//
LOCUS       WP_235903241             312 aa            linear   BCT 02-MAR-2025
DEFINITION  fused DSP-PTPase phosphatase/NAD kinase-like protein [Victivallis
            lenta].
ACCESSION   WP_235903241
VERSION     WP_235903241.1
KEYWORDS    RefSeq.
SOURCE      Victivallis lenta
  ORGANISM  Victivallis lenta
            Bacteria; Pseudomonadati; Lentisphaerota; Lentisphaeria;
            Victivallales; Victivallaceae; Victivallis.
REFERENCE   1  (residues 1 to 312)
  AUTHORS   Burroughs,A.M. and Aravind,L.
  TITLE     New biochemistry in the Rhodanese-phosphatase superfamily: emerging
            roles in diverse metabolic processes, nucleic acid modifications,
            and biological conflicts
  JOURNAL   NAR Genom Bioinform 5 (1), lqad029 (2023)
   PUBMED   36968430
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 312)
  AUTHORS   Li,W.Y., Wang,X., Li,R., Li,W.Q. and Chen,K.M.
  TITLE     Genome-wide analysis of the NADK gene family in plants
  JOURNAL   PLoS One 9 (6), e101051 (2014)
   PUBMED   24968225
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047247.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22741.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Victivallis lenta"
                     /db_xref="taxon:2606640"
     Protein         1..312
                     /product="fused DSP-PTPase phosphatase/NAD kinase-like
                     protein"
                     /calculated_mol_wt=35567
     Region          30..156
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
ORIGIN      
        1 mrkwvkklff ivfsaiptat vlagngelpr nfhevdpanr icrsaqpgrr efealekrgf
       61 rtvlnlrnfh tdrrmlkdlk leecavpcna gsmteehvyn alriirdkpk pllihcwhgs
      121 drtgtvvaaf rivfngqeve taiaemreek yghhadiydn lpellravdw ekmrnrlqte
      181 dlfvepfkpe qvlridyape pfrvtaggnt aenpgaalal vqeewrkkpy rvallvfdrq
      241 pgnplyepfa aklnrlpele eavridavpd etndasmrtl crrvgleegt aravrvvphr
      301 viwtppagtp sk
//
LOCUS       WP_235903355             345 aa            linear   BCT 02-MAR-2025
DEFINITION  GH25 family lysozyme [Bilifractor porci].
ACCESSION   WP_235903355
VERSION     WP_235903355.1
KEYWORDS    RefSeq.
SOURCE      Bilifractor porci
  ORGANISM  Bilifractor porci
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Bilifractor.
REFERENCE   1  (residues 1 to 345)
  AUTHORS   Moroz,O.V., Blagova,E., Taylor,E., Turkenburg,J.P., Skov,L.K.,
            Gippert,G.P., Schnorr,K.M., Ming,L., Ye,L., Klausen,M., Cohn,M.T.,
            Schmidt,E.G.W., Nymand-Grarup,S., Davies,G.J. and Wilson,K.S.
  TITLE     Fungal GH25 muramidases: New family members with applications in
            animal nutrition and a crystal structure at 0.78A resolution
  JOURNAL   PLoS One 16 (3), e0248190 (2021)
   PUBMED   33711051
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 345)
  AUTHORS   Martinez-Fleites,C., Korczynska,J.E., Davies,G.J., Cope,M.J.,
            Turkenburg,J.P. and Taylor,E.J.
  TITLE     The crystal structure of a family GH25 lysozyme from Bacillus
            anthracis implies a neighboring-group catalytic mechanism with
            retention of anomeric configuration
  JOURNAL   Carbohydr Res 344 (13), 1753-1757 (2009)
   PUBMED   19595298
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013357.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01183.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Bilifractor porci"
                     /db_xref="taxon:2606636"
     Protein         1..345
                     /product="GH25 family lysozyme"
                     /GO_function="GO:0003796 - lysozyme activity [Evidence
                     IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /GO_process="GO:0016998 - cell wall macromolecule
                     catabolic process [Evidence IEA]"
                     /calculated_mol_wt=38189
     Region          3..175
                     /region_name="GH25_muramidase"
                     /note="Endo-N-acetylmuramidases (muramidases) are
                     lysozymes (also referred to as peptidoglycan hydrolases)
                     that degrade bacterial cell walls by catalyzing the
                     hydrolysis of 1,4-beta-linkages between N-acetylmuramic
                     acid and N-acetyl-D-glucosamine residues; cl10448"
                     /db_xref="CDD:447900"
     Site            order(4,27,59,61,93,95,124,143,170)
                     /site_type="active"
                     /db_xref="CDD:119373"
     Region          204..243
                     /region_name="CW_7"
                     /note="CW_7 repeat; pfam08230"
                     /db_xref="CDD:462399"
     Region          253..292
                     /region_name="CW_7"
                     /note="CW_7 repeat; pfam08230"
                     /db_xref="CDD:462399"
     Region          305..343
                     /region_name="CW_7"
                     /note="CW_7 repeat; pfam08230"
                     /db_xref="CDD:462399"
ORIGIN      
        1 miidvsehng vlnweslktq iegaiircgy gsnitaqddk ywarnvsece rlgipygvyl
       61 ysyaateaaa rseaehvlrl isghnpelpi fydleeakyg taaranyyaf eheikaagfr
      121 cglytgeyyy nqymhgtaad yrwiakygtn ngqpqkkptl sdganyqlwq ftskwmnqnm
      181 daseiidrsv fatttaaavk ksvdeiaaev iagkwgngtd rknrlqaagy dynavqacvd
      241 sklsasvkkk svdevarevi agkwgsgvdr rnrlaaagyd ynavqsrvna llsggskaps
      301 ksvteiarev iagkwgngse rrrriqaagy dynavqsevn rllkr
//
LOCUS       WP_235903449             278 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Taibaiella lutea].
ACCESSION   WP_235903449
VERSION     WP_235903449.1
KEYWORDS    RefSeq.
SOURCE      Taibaiella lutea
  ORGANISM  Taibaiella lutea
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Taibaiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Taibaiella lutea"
                     /db_xref="taxon:2608001"
     Protein         1..278
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=31617
     Region          24..276
                     /region_name="PRK13500"
                     /note="HTH-type transcriptional activator RhaR"
                     /db_xref="CDD:184091"
     Region          196..273
                     /region_name="HTH_18"
                     /note="Helix-turn-helix domain; pfam12833"
                     /db_xref="CDD:432818"
ORIGIN      
        1 msddfsggis idrihikktd fksaeeyeqs tqshrdegyt fhivekgsvl ieidfqkyii
       61 tapavvymhp nqvhrilefk nitvgslaik neslnpdylk fleeiapakp llltkeasst
      121 vaaifslclh fsvqknnklh rpllkdscnt lvaflisqfl nqhkpeshls rfeivakgfr
      181 qlleknycti krpgeyagll nistpylnec irnatgfsvs qniqdriile akrllhhtdk
      241 svkeiafelg yvdypyftrm fakatgmsal sfrsknhd
//
LOCUS       WP_235903492             403 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2062 domain-containing protein [Taibaiella lutea].
ACCESSION   WP_235903492
VERSION     WP_235903492.1
KEYWORDS    RefSeq.
SOURCE      Taibaiella lutea
  ORGANISM  Taibaiella lutea
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Taibaiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021363.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09835.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Taibaiella lutea"
                     /db_xref="taxon:2608001"
     Protein         1..403
                     /product="DUF2062 domain-containing protein"
                     /calculated_mol_wt=45824
     Region          26..200
                     /region_name="DPM_DPG-synthase_like"
                     /note="DPM_DPG-synthase_like is a member of the
                     Glycosyltransferase 2 superfamily; cd04179"
                     /db_xref="CDD:133022"
     Site            order(29,31,108)
                     /site_type="active"
                     /note="Ligand binding site [active]"
                     /db_xref="CDD:133022"
     Site            order(56,107..108)
                     /site_type="active"
                     /note="Putative Catalytic site [active]"
                     /db_xref="CDD:133022"
     Site            106..108
                     /site_type="active"
                     /note="DXD motif [active]"
                     /db_xref="CDD:133022"
     Region          <284..381
                     /region_name="COG3216"
                     /note="Uncharacterized conserved protein, DUF2062 family
                     [Function unknown]"
                     /db_xref="CDD:442449"
ORIGIN      
        1 mqlnqfmlsi ntpshqdlfq qcnacvlipt ynnaqtlaal isdvanythn iivvndgstd
       61 ntaailaqyn fikvlsyspn rgkgnalkkg frmaleygyr yaitidsdgq hypkdlpkfi
      121 daiierpdsl iigarnmdqa hipgkssfgn kfsnfwfwve tgitlpdtqs gyrlyplefl
      181 rkmkfftrky efeievpvrl awkrvpvfai pvsvyyppas erithfrpfk dftrisilnt
      241 fltfiallwi hprnfiltit srkglkkiwq eivvrsdesn ftkaisiafg ifmgivplwg
      301 fqlaigipla vyfrmnkalf llaanisifp pifwalslvt gkiilgyenw slkwndisln
      361 qvkeagaaff lggtvlaitm glfafllsfl llkifrkkss ltn
//
LOCUS       WP_235903450              57 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Taibaiella lutea].
ACCESSION   WP_235903450
VERSION     WP_235903450.1
KEYWORDS    RefSeq.
SOURCE      Taibaiella lutea
  ORGANISM  Taibaiella lutea
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Taibaiella.
REFERENCE   1  (residues 1 to 57)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 57)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..57
                     /organism="Taibaiella lutea"
                     /db_xref="taxon:2608001"
     Protein         1..57
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=5818
     Region          <2..56
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(14,17,40,49)
                     /site_type="active"
                     /db_xref="CDD:271185"
ORIGIN      
        1 makalgidkp vtthsarhsf atilknsgap vaiisqalgh sseattqnyl aslkqtn
//
LOCUS       WP_235903530             108 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein [Taibaiella lutea].
ACCESSION   WP_235903530
VERSION     WP_235903530.1
KEYWORDS    RefSeq.
SOURCE      Taibaiella lutea
  ORGANISM  Taibaiella lutea
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Taibaiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Taibaiella lutea"
                     /db_xref="taxon:2608001"
     Protein         1..108
                     /product="phosphopantetheine-binding protein"
                     /calculated_mol_wt=11908
     Region          21..106
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; cl09936"
                     /db_xref="CDD:447865"
ORIGIN      
        1 mktgheqitp dfvftlykan tsmedlkvtl kqqiidalnl qgmkpedidd saplfgdagl
       61 gldsidslel mvllernygi kltdasegrn vlaniqsmse yilanrkf
//
LOCUS       WP_235903341              41 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6219 family protein [Bilifractor porci].
ACCESSION   WP_235903341
VERSION     WP_235903341.1
KEYWORDS    RefSeq.
SOURCE      Bilifractor porci
  ORGANISM  Bilifractor porci
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Bilifractor.
REFERENCE   1  (residues 1 to 41)
  AUTHORS   Guo,C.J., Chang,F.Y., Wyche,T.P., Backus,K.M., Acker,T.M.,
            Funabashi,M., Taketani,M., Donia,M.S., Nayfach,S., Pollard,K.S.,
            Craik,C.S., Cravatt,B.F., Clardy,J., Voigt,C.A. and Fischbach,M.A.
  TITLE     Discovery of Reactive Microbiota-Derived Metabolites that Inhibit
            Host Proteases
  JOURNAL   Cell 168 (3), 517-526 (2017)
   PUBMED   28111075
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039691.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19727.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..41
                     /organism="Bilifractor porci"
                     /db_xref="taxon:2606636"
     Protein         1..41
                     /product="DUF6219 family protein"
                     /calculated_mol_wt=4458
     Region          <2..>34
                     /region_name="DUF6219"
                     /note="Family of unknown function (DUF6219); pfam19727"
                     /db_xref="CDD:437559"
ORIGIN      
        1 mktllddhkf wacvtllgmi mamitghkmv ighkadsaee d
//
LOCUS       WP_235903561             455 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-linked oxidase C-terminal domain-containing protein
            [Pontixanthobacter luteolus].
ACCESSION   WP_235903561
VERSION     WP_235903561.1
KEYWORDS    RefSeq.
SOURCE      Pontixanthobacter luteolus
  ORGANISM  Pontixanthobacter luteolus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Pontixanthobacter.
REFERENCE   1  (residues 1 to 455)
  AUTHORS   Mattevi,A., Fraaije,M.W., Coda,A. and van Berkel,W.J.
  TITLE     Crystallization and preliminary X-ray analysis of the flavoenzyme
            vanillyl-alcohol oxidase from Penicillium simplicissimum
  JOURNAL   Proteins 27 (4), 601-603 (1997)
   PUBMED   9141139
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02913.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Pontixanthobacter luteolus"
                     /db_xref="taxon:295089"
     Protein         1..455
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=49271
     Region          1..452
                     /region_name="PLN02805"
                     /note="D-lactate dehydrogenase [cytochrome]"
                     /db_xref="CDD:178402"
ORIGIN      
        1 mpqgfldrle qrfgdqlqtg eamreqhgss eshyvamlpd avvfahsred vvalvricse
       61 flvpivpfga gtsiegnaaa lrggvsldmt rmdkiiavna edfdcviqpg vrreqlneyl
      121 rdqglffpid pganatlggm astrasgtna vrygtmkdav lslevvtpqg nvirtatrar
      181 ksaagydltr lyvgaegtlg iitelslrlh pipeaissav csfdgldgav dtvvqsiqcg
      241 vplarveild slqmravnrw skldypeapt lffefhgspa yvaeqvvtvk aiaetnggge
      301 fawsnrpeer nklwrarhda yyaavnlreg aigwatdvcv pmsrlaecia ethkdlatas
      361 mpatilghvg dgnfhvvfsi dpdapeemre veainarlve ralamegtct gehgiglgkq
      421 ewlvaelgda veemrtikra ldpenlmnpg kifsl
//
LOCUS       WP_235903613             349 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein
            [Pontixanthobacter luteolus].
ACCESSION   WP_235903613
VERSION     WP_235903613.1
KEYWORDS    RefSeq.
SOURCE      Pontixanthobacter luteolus
  ORGANISM  Pontixanthobacter luteolus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Pontixanthobacter.
REFERENCE   1  (residues 1 to 349)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Pontixanthobacter luteolus"
                     /db_xref="taxon:295089"
     Protein         1..349
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=38443
     Region          14..287
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(19,21..22,24,43..45,90..92,131..133,162,166,
                     191..194)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(109,133,162,166)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mrdkhkwelq magtvlvtgg tgyiggevid qllakgytvh ttvrskakse erlhqrwkda
       61 tgrlkvfead lmsddgwaaa nagcdavahv aspfpmgvpk dkndlvipam egtlralkfa
      121 qqaginrfvq tssaaaiayg qknkdhfdyt dwtnltegvp pyiesktvae rsardwvaan
      181 apdmifcsin pvavfgpvyd ddlstsvemv kkimdgsipm apnmgicvtd vrdvaeahvr
      241 aieapadkvr gerfptsqkf mwieemaetv rqrapefsak vptrrmpdfl vkllalfmpe
      301 mkqikgelgn vrdvsgkhte dvlgyrfita eqtiedtvrs lvahgivkv
//
LOCUS       WP_235903606             275 aa            linear   BCT 02-MAR-2025
DEFINITION  TSUP family transporter [Pontixanthobacter luteolus].
ACCESSION   WP_235903606
VERSION     WP_235903606.1
KEYWORDS    RefSeq.
SOURCE      Pontixanthobacter luteolus
  ORGANISM  Pontixanthobacter luteolus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Pontixanthobacter.
REFERENCE   1  (residues 1 to 275)
  AUTHORS   Krejcik,Z., Denger,K., Weinitschke,S., Hollemeyer,K., Paces,V.,
            Cook,A.M. and Smits,T.H.
  TITLE     Sulfoacetate released during the assimilation of taurine-nitrogen
            by Neptuniibacter caesariensis: purification of sulfoacetaldehyde
            dehydrogenase
  JOURNAL   Arch Microbiol 190 (2), 159-168 (2008)
   PUBMED   18506422
REFERENCE   2  (residues 1 to 275)
  AUTHORS   Weinitschke,S., Denger,K., Cook,A.M. and Smits,T.H.M.
  TITLE     The DUF81 protein TauE in Cupriavidus necator H16, a sulfite
            exporter in the metabolism of C2 sulfonates
  JOURNAL   Microbiology (Reading) 153 (Pt 9), 3055-3060 (2007)
   PUBMED   17768248
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014035.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01925.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Pontixanthobacter luteolus"
                     /db_xref="taxon:295089"
     Protein         1..275
                     /product="TSUP family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=28595
     Region          20..271
                     /region_name="DsbD"
                     /note="Cytochrome C biogenesis protein transmembrane
                     region; cl21514"
                     /db_xref="CDD:473893"
ORIGIN      
        1 mglslmglaa lsasghsgqm iesftpetwl ivtmfgvail tgfidsiagg gglvmmpall
       61 aaglpphlai gtnklqsvfg tstacwsywr gglveirrnl plvglvffgs aigailiqqi
      121 sagvlayivp vflialagyv ifsprmtdnd aherlsrksy apvagtisly dgffgpgtgq
      181 fftaslvglr gqgltratan aklfnattnw aavivftlgg kmvwllglam aagamiggfi
      241 gsrfamrhga klirplmiva slgltgkilw dllaa
//
LOCUS       WP_235903754             619 aa            linear   BCT 02-MAR-2025
DEFINITION  sialate O-acetylesterase [Pontixanthobacter luteolus].
ACCESSION   WP_235903754
VERSION     WP_235903754.1
KEYWORDS    RefSeq.
SOURCE      Pontixanthobacter luteolus
  ORGANISM  Pontixanthobacter luteolus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Pontixanthobacter.
REFERENCE   1  (residues 1 to 619)
  AUTHORS   Surolia,I., Pirnie,S.P., Chellappa,V., Taylor,K.N., Cariappa,A.,
            Moya,J., Liu,H., Bell,D.W., Driscoll,D.R., Diederichs,S.,
            Haider,K., Netravali,I., Le,S., Elia,R., Dow,E., Lee,A.,
            Freudenberg,J., De Jager,P.L., Chretien,Y., Varki,A.,
            MacDonald,M.E., Gillis,T., Behrens,T.W., Bloch,D., Collier,D.,
            Korzenik,J., Podolsky,D.K., Hafler,D., Murali,M., Sands,B.,
            Stone,J.H., Gregersen,P.K. and Pillai,S.
  TITLE     Functionally defective germline variants of sialic acid
            acetylesterase in autoimmunity
  JOURNAL   Nature 466 (7303), 243-247 (2010)
   PUBMED   20555325
REFERENCE   2  (residues 1 to 619)
  AUTHORS   Bitto,E., Bingman,C.A., McCoy,J.G., Allard,S.T., Wesenberg,G.E. and
            Phillips,G.N. Jr.
  TITLE     The structure at 1.6 Angstroms resolution of the protein product of
            the At4g34215 gene from Arabidopsis thaliana
  JOURNAL   Acta Crystallogr D Biol Crystallogr 61 (Pt 12), 1655-1661 (2005)
   PUBMED   16301800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015585.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03629.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Pontixanthobacter luteolus"
                     /db_xref="taxon:295089"
     Protein         1..619
                     /product="sialate O-acetylesterase"
                     /calculated_mol_wt=66713
     Region          3..78
                     /region_name="Ca_tandemer"
                     /note="Ca2+-stabilized adhesin repeat; NF033510"
                     /db_xref="CDD:411149"
     Region          226..>352
                     /region_name="LacZ"
                     /note="Beta-galactosidase/beta-glucuronidase [Carbohydrate
                     transport and metabolism]; COG3250"
                     /db_xref="CDD:442481"
     Region          <407..513
                     /region_name="SASA"
                     /note="Carbohydrate esterase, sialic acid-specific
                     acetylesterase; pfam03629"
                     /db_xref="CDD:427409"
ORIGIN      
        1 maaptlgpay gdgmvlqrdv pvvlegsaea getvtarmgd atgqttanpd gtfrltlpar
       61 pastqaktlf lsdpagstel rnilvgdvfl csgqsnmelp vnraldtsnq lrmaaddgir
      121 lfkvgqttas vpqthftepv qwnaasrdtv gefsaacfym akqlrldnpa vpvglihsnw
      181 ggsaarawla pegvkalyga ealeqlrays ndplaatqrf vpqwydwwre kdegrepwad
      241 ssildwqpip kfsfwndwtg tgldtearan vwlrqtitlt akqaasqgkl sigaiddmdl
      301 tfvngqpvgy tfgwgverty dvpaeylrkg dneiliaann mwdtggffag pdrlfftsdr
      361 gekvplgpaw eysvsgvtgv pprapwdana glgvmhnami aplgpmrlag aawyqgeadv
      421 gqpdydeklr elfagwrdqf gpqmkmmvvq ladfgerraq paesawaqlr qdqldgvead
      481 adailvtaid igeptdihpa nknvlgkrla hafagaampm paaavrrgea vevtftglsg
      541 dlaalggpyp lgielcgaer dtcrwaspvl sgqtmsipvp agfqaqrvrh awadapvvnl
      601 ydargmpvpg felaitqgd
//
LOCUS       WP_235903807             941 aa            linear   BCT 02-MAR-2025
DEFINITION  MASE1 domain-containing protein [Pontixanthobacter luteolus].
ACCESSION   WP_235903807
VERSION     WP_235903807.1
KEYWORDS    RefSeq.
SOURCE      Pontixanthobacter luteolus
  ORGANISM  Pontixanthobacter luteolus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Pontixanthobacter.
REFERENCE   1  (residues 1 to 941)
  AUTHORS   Pfiffer,V., Sarenko,O., Possling,A. and Hengge,R.
  TITLE     Genetic dissection of Escherichia coli's master diguanylate cyclase
            DgcE: Role of the N-terminal MASE1 domain and direct signal input
            from a GTPase partner system
  JOURNAL   PLoS Genet 15 (4), e1008059 (2019)
   PUBMED   31022167
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 941)
  AUTHORS   Lacey,M., Agasing,A., Lowry,R. and Green,J.
  TITLE     Identification of the YfgF MASE1 domain as a modulator of bacterial
            responses to aspartate
  JOURNAL   Open Biol 3 (6), 130046 (2013)
   PUBMED   23740576
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 941)
  AUTHORS   Nikolskaya,A.N., Mulkidjanian,A.Y., Beech,I.B. and Galperin,M.Y.
  TITLE     MASE1 and MASE2: two novel integral membrane sensory domains
  JOURNAL   J Mol Microbiol Biotechnol 5 (1), 11-16 (2003)
   PUBMED   12673057
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05231.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..941
                     /organism="Pontixanthobacter luteolus"
                     /db_xref="taxon:295089"
     Protein         1..941
                     /product="MASE1 domain-containing protein"
                     /calculated_mol_wt=101014
     Region          18..299
                     /region_name="MASE1"
                     /note="pfam05231"
                     /db_xref="CDD:428383"
     Region          170..671
                     /region_name="COG4251"
                     /note="Bacteriophytochrome (light-regulated signal
                     transduction histidine kinase) [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443393"
     Region          <430..941
                     /region_name="TMAO_torS"
                     /note="TMAO reductase sytem sensor TorS; TIGR02956"
                     /db_xref="CDD:274362"
ORIGIN      
        1 mqsipenrar sqiadaflip lagailfgll ayfsielsrg dgriaavwvp ngvavaylmr
       61 vrvryeavfl aalycgnvsa nlavgdsaiq aaslslcntv eivlaailvr rfcgrkpdmv
      121 rvshlmifva sagiaapias aclavvvidm ssgalletwl kwattdalgm ilvaptlmii
      181 vdaaehprwp epsevaewsl ltiagtitty lvfrqtefpl lflvapvvvs hafrlgslgt
      241 afsiikvavv atimttrghg pinliehsqt aellvlqtfl asafvmglpv aavlngerra
      301 vrklarrqsh lklltdnitd aivrydingi ctycspsves vlganpkefl gkrasermhp
      361 eakkaisqae arllsgests erftyrryld dgqgrpvfie adaaiaigss tkkpegiivs
      421 ardvthrvtl ehqlkrarkh aenaavsksq flanmsheir tpmngvlgfv dlllradlpk
      481 eqqrhaelik esgdsmmall ndildiskid agevminhep vdvghvvknc lklhsanaes
      541 kgitltsdlp gdfpqavdcd plrlrqiiln llgnsikfte sgticvqvsr aggeftvave
      601 dtgigitpdr lhaifnpfeq adnatsrryg gtglglsisr klatllggtl satsefgtgs
      661 rftltlplvq sklvakqakr cdtsdlrcqt iarsrillae dhdinrilvt tmleqcgqsv
      721 etavdgqeav ssimaakans apfdlvlmdv qmpevdgyla tqtvrnlgvs peelpiialt
      781 anafeedisa aisagmqahl akplqyeklv tmlqqwlpti sdmpetgarl pspdagaaka
      841 aaaaaneata ttpdsnvsia drwklrrqea ldavsealra gafdgqased lartchklag
      901 tagmfgeeel gkrasalera lksadqaaer srlaedllra a
//
LOCUS       WP_235903851             458 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Sphingomonas carotinifaciens].
ACCESSION   WP_235903851
VERSION     WP_235903851.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas carotinifaciens
  ORGANISM  Sphingomonas carotinifaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 458)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Sphingomonas carotinifaciens"
                     /db_xref="taxon:1166323"
     Protein         1..458
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=47575
     Region          <119..458
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(194..195,198..199,202,205..206,208..209,212,
                     215..216,219,222..223,226..227,230,233..234,236..237,241,
                     243..244,247,250..251,254..255,258,261,264..265,268,272,
                     275,282,286,289,292..293,296,299..300,303..304,306..307,
                     310..311,324..325,328,331..332,335,338..339,341..342,
                     345..346,349,352..353,356,359..360,362..363,366..367,
                     369..370,373,376..377,380,383..384)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            264..297
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 mrilsiiygt laatslaliv frdtlgvqta iaigtgital tlliawgtgr avvipyvatv
       61 vrmeglaagd ldapiaytdh rdcvgrmtka mavfrdnava vsearaaqei vitalgtgle
      121 nlaagdlsrp iptvfpadye klrrdynnal halsgtlsav trsmdgirta ssevstasdd
      181 lshrteqqaa sleetaasme eitttvreaa dgasrvngvv daakseaees grivreavsa
      241 mggierasqe iseiisvidg iafqtnllal nagveaarag dagkgfavva sevralaqrs
      301 adaakdvktr iltsseqvgn gvtlvnrtgq slerivarig eistlvsqia asaaqqalgl
      361 sqvntavgem dnvtqqnaam veqssaaars laneadelar qvarfrlsdt geaeaprmpv
      421 svpaprapap trvvarraat hgslalavep daddwsnf
//
LOCUS       WP_235903874             307 aa            linear   BCT 02-MAR-2025
DEFINITION  toxic anion resistance protein [Sphingomonas carotinifaciens].
ACCESSION   WP_235903874
VERSION     WP_235903874.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas carotinifaciens
  ORGANISM  Sphingomonas carotinifaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   O'Gara,J.P., Gomelsky,M. and Kaplan,S.
  TITLE     Identification and molecular genetic analysis of multiple loci
            contributing to high-level tellurite resistance in Rhodobacter
            sphaeroides 2.4.1
  JOURNAL   Appl Environ Microbiol 63 (12), 4713-4720 (1997)
   PUBMED   9406390
REFERENCE   2  (residues 1 to 307)
  AUTHORS   Whelan,K.F., Colleran,E. and Taylor,D.E.
  TITLE     Phage inhibition, colicin resistance, and tellurite resistance are
            encoded by a single cluster of genes on the IncHI2 plasmid R478
  JOURNAL   J Bacteriol 177 (17), 5016-5027 (1995)
   PUBMED   7665479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017617.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05816.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Sphingomonas carotinifaciens"
                     /db_xref="taxon:1166323"
     Protein         1..307
                     /product="toxic anion resistance protein"
                     /calculated_mol_wt=32919
ORIGIN      
        1 mlsppadspe talapldpdr rrmvqgrvre alrqwlaadd dallallgrl grdeiahaae
       61 qsrrlpqstt paaaeadtil trlrteveal atppapprqs fadrlfgrpp ppvptvdsgt
      121 lltdlladle rqrdallrea itlrghrerl vaadhrleea gqflrlaeqa veaaareiav
      181 dnppradllr tragatvqer lrdvltqliv trqgwmtldi lldghealga aigragqtmm
      241 aalrtalaar aalaegqrmt aqataldrta qaaagsdras atralddave qmrhalaaat
      301 tgfadar
//
LOCUS       WP_235903923             900 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5695 domain-containing protein [Sphingomonas carotinifaciens].
ACCESSION   WP_235903923
VERSION     WP_235903923.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas carotinifaciens
  ORGANISM  Sphingomonas carotinifaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039503.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18951.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Sphingomonas carotinifaciens"
                     /db_xref="taxon:1166323"
     Protein         1..900
                     /product="DUF5695 domain-containing protein"
                     /calculated_mol_wt=99524
     Region          39..893
                     /region_name="DUF5695"
                     /note="Family of unknown function (DUF5695); pfam18951"
                     /db_xref="CDD:465930"
ORIGIN      
        1 miamtlgtat saliaqdtpk pavrpvvtte hrvgpfhial rqdtqtlarl spanepgfsf
       61 vptsreaera gdgynhlgdl nlrlrtpggt wrdfasaher rpirplpsgg ttiaaadita
      121 smgegapvrv erhwrneggr lalafritnt aatpveigtl gmpmvfdnii tdrnleqaha
      181 qasfvdpyig rdagylqvtr lngkgpallv mpakntplea yvplrnprev kdgsiftdrs
      241 prgqtsegfy dwtvhsagyv erewkkageq wnaptartls pgetlevgvr faqspsirai
      301 eptliannrp vavglpgyvv ptdqdaalfv rrpaaitsie sypagrvtak pagtvkgwtr
      361 lalrgsqwgp arltigyadg tkqtvsyfit kpldqamadl grfstnqqwy egkgdpfgrn
      421 pailtydnes kaivdveprv wiagmsdegg ggswvaatmk qldhpdpqev akierlvdet
      481 vhgrlqvvsg pqaggvkksl fyydpvkfpt lytgdpekwk swtlwkekda ndlgraynyp
      541 hvaigywvly riarnhpgmv srhdwrwyld rayetsvamt rahyaefglm egdvfldilk
      601 dlkregmtak aadmerlmka radhwrtlky pfgsemawds tgqpevyawm ryfgfqpqad
      661 vtrevilgyd ptvpswgyng narrywdfly ggkyprierq ihhygsalna vplfdayrqn
      721 padlhllrva yggmmggitn idqqgfssaa fhawpdmmkw dpysgdygmg yyghaltaat
      781 ylvdhptfgw vgfggsvven agtvtivpkd gartrlfvap igqwitleag riaearyvpk
      841 tgritltldp aapntptarv fvegtmagak tyvlnngkme rggytvplgh gttrieltrp
//
LOCUS       WP_235903637             301 aa            linear   BCT 02-MAR-2025
DEFINITION  TorF family putative porin [Pontixanthobacter luteolus].
ACCESSION   WP_235903637
VERSION     WP_235903637.1
KEYWORDS    RefSeq.
SOURCE      Pontixanthobacter luteolus
  ORGANISM  Pontixanthobacter luteolus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Pontixanthobacter.
REFERENCE   1  (residues 1 to 301)
  AUTHORS   Bordi,C., Ansaldi,M., Gon,S., Jourlin-Castelli,C., Iobbi-Nivol,C.
            and Mejean,V.
  TITLE     Genes regulated by TorR, the trimethylamine oxide response
            regulator of Shewanella oneidensis
  JOURNAL   J Bacteriol 186 (14), 4502-4509 (2004)
   PUBMED   15231782
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021230.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09694.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Pontixanthobacter luteolus"
                     /db_xref="taxon:295089"
     Protein         1..301
                     /product="TorF family putative porin"
                     /calculated_mol_wt=31520
     Region          83..300
                     /region_name="Gcw_chp"
                     /note="Bacterial protein of unknown function (Gcw_chp);
                     cl09901"
                     /db_xref="CDD:299108"
ORIGIN      
        1 mltsirglta aslfvttali sapalaseia veaettvint sdivtsdvvv diadidvnav
       61 mpeltaqevv risqdvnfek eskvggesgl elsgnvalvs dyrfrgvsfs dgdialqggi
      121 dlghssgfyv gtwastisgg safgeleldv yggwngdvae gltfdvglly yiyptgdipg
      181 vdtdyfepya sisttlgpvs atlgaayawd qdslgnsdni yvytdfevgi pdtpvslsah
      241 lgytdgvfst dtdgtsfdwg lgasyavtds lslgvnyvdt qgpsfedftd agffftlsys
      301 m
//
LOCUS       WP_235903981             732 aa            linear   BCT 02-MAR-2025
DEFINITION  BamA/TamA family outer membrane protein [Sphingomonas
            carotinifaciens].
ACCESSION   WP_235903981
VERSION     WP_235903981.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas carotinifaciens
  ORGANISM  Sphingomonas carotinifaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 732)
  AUTHORS   Heinz,E. and Lithgow,T.
  TITLE     A comprehensive analysis of the Omp85/TpsB protein superfamily
            structural diversity, taxonomic occurrence, and evolution
  JOURNAL   Front Microbiol 5, 370 (2014)
   PUBMED   25101071
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013283.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01103.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Sphingomonas carotinifaciens"
                     /db_xref="taxon:1166323"
     Protein         1..732
                     /product="BamA/TamA family outer membrane protein"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /calculated_mol_wt=78285
     Region          <11..>260
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     Region          155..732
                     /region_name="TamA"
                     /note="Outer membrane translocation and assembly module
                     TamA [Cell wall/membrane/envelope biogenesis]; COG0729"
                     /db_xref="CDD:440493"
ORIGIN      
        1 mavlhgrqyw lafalaavsp asaqiaqpgs apaqgpdapr addqeadpqg napivpesef
       61 daalpplsgd inaplepmiq napaqpaasg tatrpttqpl ppangatvpq vgdtlgaptp
      121 edpvlaqple platfdttpl qtaadvkdad qpdiryetav rgleplnled efkslsalre
      181 gggkaanatq vsararedeq lairlmrslg yydataistv eqvpgedgkp grlravvtat
      241 pgrlyrlssv tinaepvtpp dlirsnlplk vgdpieaari qgaeanvslv lpqrgypfak
      301 vgerdilled qspeptgayt lpvetgprss fgqlttsgdp vfdlehlnvf prfkqgelyd
      361 srltddlrea liatslfrsv svqpqrtgrm npdgteqidl mvnqtkgpdr slggsagyqv
      421 gqgirvegtw thrnlfpqeg aliasvvagt qeqgasgtfr rsnagrrdrt ftavasasrl
      481 nydafdafig tlsarwsyds tpiwqkpfty sygveltgtn esvydfarge rrrgtygiaa
      541 lpgqvvwdrs dsllnpakgf rlklnlspet svrgavrpyg rsmvegtfyy patssiviag
      601 raragsifgi drddlapsrr yygggggsvr gygfqrlgpl dpdgnpvggr slnefalear
      661 yrfgnfgivp fidagnsyes tlpsfsdlrf gagiggrfyt nfgpmrvdva tplnkrpgdg
      721 rialyisigq af
//
LOCUS       WP_235903991             193 aa            linear   BCT 02-MAR-2025
DEFINITION  CAP domain-containing protein [Sphingomonas carotinifaciens].
ACCESSION   WP_235903991
VERSION     WP_235903991.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas carotinifaciens
  ORGANISM  Sphingomonas carotinifaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 193)
  AUTHORS   Gibbs,G.M., Roelants,K. and O'Bryan,M.K.
  TITLE     The CAP superfamily: cysteine-rich secretory proteins, antigen 5,
            and pathogenesis-related 1 proteins--roles in reproduction, cancer,
            and immune defense
  JOURNAL   Endocr Rev 29 (7), 865-897 (2008)
   PUBMED   18824526
REFERENCE   2  (residues 1 to 193)
  AUTHORS   Milne,T.J., Abbenante,G., Tyndall,J.D., Halliday,J. and Lewis,R.J.
  TITLE     Isolation and characterization of a cone snail protease with
            homology to CRISP proteins of the pathogenesis-related protein
            superfamily
  JOURNAL   J Biol Chem 278 (33), 31105-31110 (2003)
   PUBMED   12759345
REFERENCE   3  (residues 1 to 193)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
REFERENCE   4  (residues 1 to 193)
  AUTHORS   Fernandez,C., Szyperski,T., Bruyere,T., Ramage,P., Mosinger,E. and
            Wuthrich,K.
  TITLE     NMR solution structure of the pathogenesis-related protein P14a
  JOURNAL   J Mol Biol 266 (3), 576-593 (1997)
   PUBMED   9067611
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012415.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00188.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Sphingomonas carotinifaciens"
                     /db_xref="taxon:1166323"
     Protein         1..193
                     /product="CAP domain-containing protein"
                     /calculated_mol_wt=21014
     Region          55..193
                     /region_name="CAP"
                     /note="CAP (cysteine-rich secretory proteins, antigen 5,
                     and pathogenesis-related 1 proteins) domain family;
                     cl00133"
                     /db_xref="CDD:412178"
ORIGIN      
        1 mmradmavmi plrhpliaal lmlascaqgp ervveprpst apvargegll rramldgqna
       61 argalgiapl awsdtlarsa rayademart grfrhadqpq gpgregenlw tgtrgayayd
      121 emvghwvaek rdfvngvtpd ssrtgrwedv ghyaqivwrn srevgcamas nakddflvcr
      181 yspsgnvvge ray
//
LOCUS       WP_235904012             482 aa            linear   BCT 02-MAR-2025
DEFINITION  phospholipid carrier-dependent glycosyltransferase [Sphingomonas
            carotinifaciens].
ACCESSION   WP_235904012
VERSION     WP_235904012.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas carotinifaciens
  ORGANISM  Sphingomonas carotinifaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 482)
  AUTHORS   Tavares-Carreon,F., Fathy Mohamed,Y., Andrade,A. and Valvano,M.A.
  TITLE     ArnT proteins that catalyze the glycosylation of lipopolysaccharide
            share common features with bacterial N-oligosaccharyltransferases
  JOURNAL   Glycobiology 26 (3), 286-300 (2016)
   PUBMED   26515403
REFERENCE   2  (residues 1 to 482)
  AUTHORS   Petrou,V.I., Herrera,C.M., Schultz,K.M., Clarke,O.B., Vendome,J.,
            Tomasek,D., Banerjee,S., Rajashankar,K.R., Belcher Dufrisne,M.,
            Kloss,B., Kloppmann,E., Rost,B., Klug,C.S., Trent,M.S., Shapiro,L.
            and Mancia,F.
  TITLE     Structures of aminoarabinose transferase ArnT suggest a molecular
            basis for lipid A glycosylation
  JOURNAL   Science 351 (6273), 608-612 (2016)
   PUBMED   26912703
REFERENCE   3  (residues 1 to 482)
  AUTHORS   Gentzsch,M. and Tanner,W.
  TITLE     The PMT gene family: protein O-glycosylation in Saccharomyces
            cerevisiae is vital
  JOURNAL   EMBO J 15 (21), 5752-5759 (1996)
   PUBMED   8918452
REFERENCE   4  (residues 1 to 482)
  AUTHORS   Martin-Blanco,E. and Garcia-Bellido,A.
  TITLE     Mutations in the rotated abdomen locus affect muscle development
            and reveal an intrinsic asymmetry in Drosophila
  JOURNAL   Proc Natl Acad Sci U S A 93 (12), 6048-6052 (1996)
   PUBMED   8650217
REFERENCE   5  (residues 1 to 482)
  AUTHORS   Lussier,M., Gentzsch,M., Sdicu,A.M., Bussey,H. and Tanner,W.
  TITLE     Protein O-glycosylation in yeast. The PMT2 gene specifies a second
            protein O-mannosyltransferase that functions in addition to the
            PMT1-encoded activity
  JOURNAL   J Biol Chem 270 (6), 2770-2775 (1995)
   PUBMED   7852348
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014425.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02366.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Sphingomonas carotinifaciens"
                     /db_xref="taxon:1166323"
     Protein         1..482
                     /product="phospholipid carrier-dependent
                     glycosyltransferase"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0000030 - mannosyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006493 - protein O-linked glycosylation
                     [Evidence IEA]"
                     /calculated_mol_wt=51047
ORIGIN      
        1 mrvapagapv parrllpwal laavlmgltl trtvdhdesq yvaatvlaah glmpyrdfay
       61 lqgplqpllf apiawaagaw twpalrlvna llgaltialv hraarrlgaa praaaaaagl
      121 mlccdillfs igvarndalp aalfaaalvv mtrlrggaat rgsalltgll lgaaaaakvs
      181 yalpaiaygv walaaprrhr plwlilgavp pallvawcww tapegflfgv fhfpadapae
      241 yyagypwkls laaklvdslk flalgpalva lafvigrgrm ralapllfac avaalapqpt
      301 wrqywlpflp plfialalaw hrrppgrnwr iafgitaaag lapsvaalvt angmslaeam
      361 rtsaairatm dragvtgpvs tlspqflpat grlpdadfat gpfyfrsrnl ldpgaerrlh
      421 lisharphvs ahwvlvgget rrtsgnpdld rmlahaaggp rtpvpgtgfq lvrveqppsr
      481 tr
//
LOCUS       WP_235904022             729 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Sphingomonas carotinifaciens].
ACCESSION   WP_235904022
VERSION     WP_235904022.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas carotinifaciens
  ORGANISM  Sphingomonas carotinifaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 729)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 729)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 729)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 729)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Sphingomonas carotinifaciens"
                     /db_xref="taxon:1166323"
     Protein         1..729
                     /product="ATP-binding protein"
                     /calculated_mol_wt=75809
     Region          <245..410
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     Region          <453..721
                     /region_name="envZ"
                     /note="osmolarity sensor protein; Provisional; PRK09467"
                     /db_xref="CDD:236531"
ORIGIN      
        1 mivqfiglvi galivaqlat llltlvippa ppreyaladi atalrsadah dgrfdrlvqs
       61 gppdlsargw fvsetsrakl agllkrpvaq valgfytqlp vggsvdpvat pkelpsdaer
      121 arppqtgsrr dttrdmsfts anrqerdlqp tvasayades maapafampa vfevgppagf
      181 mhtamlqqmp ggppgggfpg ggppgggfpg aglpgggfpq slpqppraqp qpssplppaq
      241 pnaqpqpqlp vqaptpsega lsqpgsvina qggpgspvps lpangaqptp ggpsaapggf
      301 pgailpqqpp aavrlplpal plperrpane aprgsvppae vqaardpgai apaipaeava
      361 spvmsgnptd tgvgdaapat galnaapspm grpvpiqrpr tslfglapap fvegdfiagf
      421 rladgrwavv spraegfpna wqrrvalwfl lsllavapia wafarrvvgp lndfahaadv
      481 lgrdpgaavl pldgpaeigr aahafnqmqs rlrsfvddrt amigaishdl rtpltrlrfr
      541 iedvpedqqd dlraevveme emitsvitfm rdastpaare rrdlaeivdd viedatllgg
      601 veagrvdsai vdvdplgirr vlnnlltnal kygggharva lhvenacava eiiddgpgvp
      661 dselerifep fyrseaarqs gregsglgla vcrsiarahg gdvalfrspe gftarvtlpl
      721 afsddrrva
//
LOCUS       WP_235904028             615 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Sphingomonas carotinifaciens].
ACCESSION   WP_235904028
VERSION     WP_235904028.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas carotinifaciens
  ORGANISM  Sphingomonas carotinifaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 615)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Sphingomonas carotinifaciens"
                     /db_xref="taxon:1166323"
     Protein         1..615
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=65067
     Region          45..180
                     /region_name="MCP2201-like_sensor"
                     /note="ligand-binding sensor domain of Comamonas
                     testosteroni CNB-2 MCP2201 and similar chemoreceptors;
                     cd19411"
                     /db_xref="CDD:438629"
     Site            order(47..48,51..52,54..55,58..59,62..63,65..66,69..70,71,
                     77..78,148,170,173..174)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:438629"
     Site            order(56..57,60,63,85..86,89,121,124..125,128,158)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:438629"
     Region          218..258
                     /region_name="HAMP"
                     /note="Histidine kinase, Adenylyl cyclase,
                     Methyl-accepting protein, and Phosphatase (HAMP) domain;
                     cd06225"
                     /db_xref="CDD:381743"
     Region          <283..615
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(355..356,359..360,363,366..367,369..370,373,
                     376..377,380,383..384,387..388,391,394..395,397..398,402,
                     404..405,408,411..412,415..416,419,422,425..426,429,433,
                     436,443,447,450,453..454,457,460..461,464..465,467..468,
                     471..472,485..486,489,492..493,496,499..500,502..503,
                     506..507,510,513..514,517,520..521,523..524,527..528,
                     530..531,534,537..538,541,544)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            425..458
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 mkvssqvyag fgaimallls vaaiatmlvg sigedlrtvn esnsvkqrya infrgsvhdr
       61 aialrdvila dtgelpgirr hideltakya qsagpldaml apaaqpqpee triladiket
      121 eqvtlplidd virrrlsgda tgahavlmak arpqfitwlk qinqfidfee grnkaigqsv
      181 tdqikrfeii mlvvcllali lalaivrwst gsmrilpdii avlqrmtagd rtvpipvvas
      241 rneigelaea mqqfrdqlaa veaeksdqtd livdslgngl adlangnlva rvnddldgpf
      301 vklkndfntt atslqttvae vakaviaikd gageirsase dlsrrteqqa asleetaaam
      361 deitetvrst aeraasanmm vrnartvaeq sgqvvrnavv amdgiertsv eiseiisvid
      421 giafqtnlla lnagveaara gdagkgfavv asevralaqr sadaakdvks rihasaeqva
      481 agvrlvgetg ealasimssf gkvdslveei assadqqska lvqvnvaige mdnvtqqnaa
      541 mveeasaaar nlaeradglg dqisrfrtga apagsmspvh qlrariaplt ssprpaapap
      601 rvagntaiaa dwaef
//
LOCUS       WP_235904037             506 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Sphingomonas carotinifaciens].
ACCESSION   WP_235904037
VERSION     WP_235904037.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas carotinifaciens
  ORGANISM  Sphingomonas carotinifaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Sphingomonas carotinifaciens"
                     /db_xref="taxon:1166323"
     Protein         1..506
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=50236
     Region          1..505
                     /region_name="PRK06484"
                     /note="short chain dehydrogenase; Validated"
                     /db_xref="CDD:168574"
ORIGIN      
        1 mtqggrivmv tgaaagigla savafagvgd rvilvdrdge aargaaarmg gaavalpvdv
       61 sdeegvrrav aavardhgri dvlisnagvv dpaahsvldl pldvldrlia vnveggflvs
      121 revarvmaaq agggaivhla sgaalralpn raaysmtkaa ilglvratac ewasggitvn
      181 avlpgytate illaleaqgr fdraraaaav plgrladpad iasailhvag arymtgaslv
      241 vdggvdafgg agaasaapap iapdagpaiv tggasgigaa iakrlaadgr kvvildrept
      301 pggitldiad haavgqavte iaarhgppai lvnnagvada faptvtqera dfrrvfdvna
      361 taalltarav aphmvaaggg tivnlssiaa sgglptrnay caakagvtml trslacewaa
      421 hgirvnavap gyiatpgvaa leragkrdls avrrriplgr lgtpeeiaat vawlaspasa
      481 yvtgsvwhvd ggwtaygdag pasdir
//
LOCUS       WP_235904045             140 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Sphingomonas carotinifaciens].
ACCESSION   WP_235904045
VERSION     WP_235904045.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas carotinifaciens
  ORGANISM  Sphingomonas carotinifaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Sphingomonas carotinifaciens"
                     /db_xref="taxon:1166323"
     Protein         1..140
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=15516
     Region          7..130
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mtkprtigvr vllldeqdrv alvrhsytdl wylpgggvkk gestkaallr elreeiaven
       61 aviervlgvy hsrrehkddh ivifvarias saggtlkrad pmeieqaewf pldalpatls
      121 patgrrieey ragrsgagdw
//
LOCUS       WP_235904067             996 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Sphingomonas
            carotinifaciens].
ACCESSION   WP_235904067
VERSION     WP_235904067.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas carotinifaciens
  ORGANISM  Sphingomonas carotinifaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 996)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..996
                     /organism="Sphingomonas carotinifaciens"
                     /db_xref="taxon:1166323"
     Protein         1..996
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=106775
     Region          94..996
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mrkkmswagg saiafiamgm lpggasaqea aslpsqdaqv eacktdpnnp acprleeaqs
       61 tpeaatvsde qqsgdaivvt gtrirrpnlt snspltsvda aeiryqgavg venvlnrlpq
      121 vtpdsnengs ngsdgtarvn lrnlgstrnl vlvngqrllp vqandlnflp sflvqrvdvv
      181 tggasavygs daisgvvnfi lrdnlngira dvqyglavhe nnnefirgiq rqagfrlsnr
      241 nvadgqklda niafgaemgd grgnvtayfg yrdykpitqg trdvsscaln aagdrgstvs
      301 cggssnnefg lfnpqtgpgr glllnntkdg nktwvpygpt flynyaplny fqrsdvryta
      361 gafakyevtd yaevygsamf mddhtfsqva psalfqgfty rvncdnplls aqqygllcga
      421 apgstatqdl fvgyrpvagn arprrddlrh tdyrftggvr geiaeglryd vnalhsvvlf
      481 netyqndidp aranrglqvv nvngvptcks vidgtdpncv pldvfryngi sdaafsyiya
      541 ptstegvdke tvlnanisad lgtygirspw ssqgvgfvlg iehrreslrf tadalaqqkg
      601 tlnsqgafnv telfteievp ilsdvpfake lvinggyrls nysnlskavs tykgevswap
      661 isdirlrgsy nrairapnis elfgpqirgn viaqdgcaga tptasrdvcr ltglpdalyg
      721 qvsecptdfc tglsggnlal kpetadtyta gvvlnpgflk rltltvdyfn ikvrdyigiv
      781 apaltteqcf enanpffcal itrdprngvi fgdvgaiasn tqntgslats gidigfsfaq
      841 plgslgalnl daqgtwlnel rteplpgles ydckgkngqt cgqptpewkh qarltwsdae
      901 qvgsislnwr yiggttldst epvfnsrika ysyfdlaata kvqdgivfra gvnnlfdkdp
      961 pilalsalgg fnngntypgv ydavgrtvfv gltaef
//
LOCUS       WP_235904087             144 aa            linear   BCT 02-MAR-2025
DEFINITION  DJ-1/PfpI family protein [Sphingomonas carotinifaciens].
ACCESSION   WP_235904087
VERSION     WP_235904087.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas carotinifaciens
  ORGANISM  Sphingomonas carotinifaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 144)
  AUTHORS   Ohnishi,Y., Yamazaki,H., Kato,J.Y., Tomono,A. and Horinouchi,S.
  TITLE     AdpA, a central transcriptional regulator in the A-factor
            regulatory cascade that leads to morphological development and
            secondary metabolism in Streptomyces griseus
  JOURNAL   Biosci Biotechnol Biochem 69 (3), 431-439 (2005)
   PUBMED   15784968
REFERENCE   2  (residues 1 to 144)
  AUTHORS   Halio,S.B., Blumentals,I.I., Short,S.A., Merrill,B.M. and
            Kelly,R.M.
  TITLE     Sequence, expression in Escherichia coli, and analysis of the gene
            encoding a novel intracellular protease (PfpI) from the
            hyperthermophilic archaeon Pyrococcus furiosus
  JOURNAL   J Bacteriol 178 (9), 2605-2612 (1996)
   PUBMED   8626329
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01965.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Sphingomonas carotinifaciens"
                     /db_xref="taxon:1166323"
     Protein         1..144
                     /product="DJ-1/PfpI family protein"
                     /calculated_mol_wt=15379
     Region          8..>142
                     /region_name="GAT_1"
                     /note="Type 1 glutamine amidotransferase (GATase1)-like
                     domain; cl00020"
                     /db_xref="CDD:469582"
     Site            103
                     /site_type="active"
                     /note="conserved cys residue [active]"
                     /db_xref="CDD:153222"
ORIGIN      
        1 mtdqplrivf aiypgmtqld ftgphqflsr lpesevvits vaggdvpseg ltfahttrla
       61 avdrcdlicv pggvnateva lnadfvgevr rlgedaryvt svctgslilg aagllkgrra
      121 achwawrhll pvfgtnsrrc prca
//
LOCUS       WP_235904095             459 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Sphingomonas carotinifaciens].
ACCESSION   WP_235904095
VERSION     WP_235904095.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas carotinifaciens
  ORGANISM  Sphingomonas carotinifaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 459)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Sphingomonas carotinifaciens"
                     /db_xref="taxon:1166323"
     Protein         1..459
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=49907
     Region          48..326
                     /region_name="GH43_F5-8_typeC-like"
                     /note="Glycosyl hydrolase family 43 protein most having a
                     F5/8 type C domain C-terminal to the GH43 domain; cd18608"
                     /db_xref="CDD:350120"
     Region          350..444
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
ORIGIN      
        1 mmglpflsrf ampaallltg galagaadvp vsrwnmagag npllpgyfad psivrdkgrw
       61 yifatidpwg ddrlglwssd ngrdwtfttp nwptkaaatg prsgdakvwa psvvkapngr
      121 wymyvsvgse vwvgtadapa gpwrdanggr pliardfape yhmidaeafv dddgraylyw
      181 gsglnwtngh cfvvrlkpdm vtfdgtprdv tpanyfeapf mvkagrnyll tysdgnttkd
      241 tykvryaigt splgpfrega tspiletdra rdvispghhs vfrsegrsyi lyhrqslpfp
      301 kggdtvlrqv avdpltlgad gviakvvpsh gsavagfvpk rsaglrwras gsaspenaad
      361 dnyatlwqpv agqpamlvad lgraqavkgs rirpeyanrp yhfgieasqd grrwrvvapv
      421 aerqgspiev phattarylr vvapvgdaam wewsidpre
//
LOCUS       WP_235904112             481 aa            linear   BCT 02-MAR-2025
DEFINITION  relaxase/mobilization nuclease domain-containing protein
            [Sphingomonas carotinifaciens].
ACCESSION   WP_235904112
VERSION     WP_235904112.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas carotinifaciens
  ORGANISM  Sphingomonas carotinifaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 481)
  AUTHORS   Meyer,R.
  TITLE     Identification of the mob genes of plasmid pSC101 and
            characterization of a hybrid pSC101-R1162 system for conjugal
            mobilization
  JOURNAL   J Bacteriol 182 (17), 4875-4881 (2000)
   PUBMED   10940031
REFERENCE   2  (residues 1 to 481)
  AUTHORS   Bravo-Angel,A.M., Gloeckler,V., Hohn,B. and Tinland,B.
  TITLE     Bacterial conjugation protein MobA mediates integration of complex
            DNA structures into plant cells
  JOURNAL   J Bacteriol 181 (18), 5758-5765 (1999)
   PUBMED   10482518
REFERENCE   3  (residues 1 to 481)
  AUTHORS   Byrd,D.R. and Matson,S.W.
  TITLE     Nicking by transesterification: the reaction catalysed by a
            relaxase
  JOURNAL   Mol Microbiol 25 (6), 1011-1022 (1997)
   PUBMED   9350859
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015397.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03432.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Sphingomonas carotinifaciens"
                     /db_xref="taxon:1166323"
     Protein         1..481
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /calculated_mol_wt=53073
     Region          95..>255
                     /region_name="Bacteroid_MobB"
                     /note="conjugal transfer protein MobB; cl46055"
                     /db_xref="CDD:480395"
     Region          144..481
                     /region_name="Relaxase"
                     /note="Relaxase/mobilization nuclease domain; cl21589"
                     /db_xref="CDD:451322"
ORIGIN      
        1 msfnlspgml dtmagifsps krhsaagggg ggrerdhggt llgfavasmf pkpasqgggh
       61 rshnrvkqaf gggsqaaisr raistldrta rrvpevmvri tgrqhgaghv lanfayisrl
      121 ghgadreval ytsegdvvrd gntmqdlahd wqewemadda rrkgatslsm ilsmpsgtdp
      181 erlkaaaldf areefanrsw vaslhvdrdh phvhvtfarr dhdgrrfhpt rddlfryrqr
      241 faqklrdrgi eanatpskar gvdsahepma arkiretgrv prldesrktr vrqlapadas
      301 nplratratr qasvraayeq siavlrtsps ivnqtvatsl qrfvevmtvp epyyrrttgt
      361 rdqapaegrr plsvpsgera hidnpiaaal vrsqamreri etrraahlad sepagpsdhr
      421 passpartrp ptspqpidpa spvrepdrid qvmrelkere rtraarlrdr dlnpekggpk
      481 r
//
LOCUS       WP_235904137             346 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase [Sphingomonas carotinifaciens].
ACCESSION   WP_235904137
VERSION     WP_235904137.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas carotinifaciens
  ORGANISM  Sphingomonas carotinifaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014237.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02156.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Sphingomonas carotinifaciens"
                     /db_xref="taxon:1166323"
     Protein         1..346
                     /product="glycosyl hydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /calculated_mol_wt=38241
     Region          45..338
                     /region_name="Glyco_hydro_26"
                     /note="Glycosyl hydrolase family 26; cl21700"
                     /db_xref="CDD:473934"
ORIGIN      
        1 mtmtmqqrdg wsrratlaga aaivaasgla tgrawahaaa rslsnpaasa earalyawlw
       61 siygtktltg qqeqnfksag aglelnhirr vtgkapallg fdymdpedqa atnaralawh
      121 kaggivsicw hwgapdigtg yenskkafgv eqalvagtpq nrammaqmag vadlltqlrd
      181 arvpvlwrpf hefsgtwfww gqhgpdgfka lwrlmyryft terkldnliw vlgwagqnvd
      241 aayypgrdcv dvagadlyvd dhgnlapmfg qvkaivgtsv piclhengpi pdpatlgpqa
      301 dwlwfmtwht rwltdpaqnp pallrdyyrs aryltkdelp rvrpwg
//
LOCUS       WP_235904152             408 aa            linear   BCT 02-MAR-2025
DEFINITION  histidine-type phosphatase [Sphingomonas carotinifaciens].
ACCESSION   WP_235904152
VERSION     WP_235904152.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas carotinifaciens
  ORGANISM  Sphingomonas carotinifaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 408)
  AUTHORS   Rigden,D.J.
  TITLE     The histidine phosphatase superfamily: structure and function
  JOURNAL   Biochem J 409 (2), 333-348 (2008)
   PUBMED   18092946
REFERENCE   2  (residues 1 to 408)
  AUTHORS   Kostrewa,D., Wyss,M., D'Arcy,A. and van Loon,A.P.
  TITLE     Crystal structure of Aspergillus niger pH 2.5 acid phosphatase at
            2. 4 A resolution
  JOURNAL   J Mol Biol 288 (5), 965-974 (1999)
   PUBMED   10329192
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012548.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00328.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Sphingomonas carotinifaciens"
                     /db_xref="taxon:1166323"
     Protein         1..408
                     /product="histidine-type phosphatase"
                     /calculated_mol_wt=42667
     Region          33..401
                     /region_name="HP"
                     /note="Histidine phosphatase domain found in a
                     functionally diverse set of proteins, mostly phosphatases;
                     contains a His residue which is phosphorylated during the
                     reaction; cl11399"
                     /db_xref="CDD:472174"
ORIGIN      
        1 mtirttarra iallafasal lpsapaaare rvervvmvmr hgvraplgge vpdgtlaaap
       61 wpkwpvapeq mtphglrsme vrgaadrawl aglgllparg cpaagavsiw tnvsprtids
      121 gkafadgfap gcdlaighra sgevdplfea lradttgfdp vraiasinay tggmdrlvqr
      181 haaalkdldh ilgckqpics pgpaaavkps rdghgidleg pirrtsgiaq vlllqyaegm
      241 pardvgwgra daasiqrvga lhaalfdvft rplymaahqa gplgrriias ltaptgpsld
      301 llvghdtnvt alaaalrldl tapgyapgdt apagalvler lyddttnars vrlsyrtqsp
      361 ttirtsantv sttnlpipgc tkarqtrcpl dafvktlaar laderign
//
LOCUS       WP_235904160            1312 aa            linear   BCT 02-MAR-2025
DEFINITION  Eco57I restriction-modification methylase domain-containing protein
            [Sphingomonas carotinifaciens].
ACCESSION   WP_235904160
VERSION     WP_235904160.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas carotinifaciens
  ORGANISM  Sphingomonas carotinifaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 1312)
  AUTHORS   Schluckebier,G., Kozak,M., Bleimling,N., Weinhold,E. and Saenger,W.
  TITLE     Differential binding of S-adenosylmethionine S-adenosylhomocysteine
            and Sinefungin to the adenine-specific DNA methyltransferase M.TaqI
  JOURNAL   J Mol Biol 265 (1), 56-67 (1997)
   PUBMED   8995524
REFERENCE   2  (residues 1 to 1312)
  AUTHORS   Janulaitis,A., Vaisvila,R., Timinskas,A., Klimasauskas,S. and
            Butkus,V.
  TITLE     Cloning and sequence analysis of the genes coding for Eco57I type
            IV restriction-modification enzymes
  JOURNAL   Nucleic Acids Res 20 (22), 6051-6056 (1992)
   PUBMED   1334261
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019291.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07669.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1312
                     /organism="Sphingomonas carotinifaciens"
                     /db_xref="taxon:1166323"
     Protein         1..1312
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=141964
     Region          <8..383
                     /region_name="COG3903"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443109"
     Region          <524..1310
                     /region_name="YeeA"
                     /note="Type II restriction/modification system,
                     endonuclease and methylase domains [Defense mechanisms];
                     COG1002"
                     /db_xref="CDD:440626"
ORIGIN      
        1 msgtisggrh dwlgylqpeg lvvapaalar igvwpapqta adgeavtqal aqepwalfrd
       61 vlgwaperva gapggpvlpe dlrvafdgge tllepdwavf aadgtvqllv rieaedllld
      121 rrgtlegwea taqqrferll retgvpagvi lgaretgrre gaagervlrl vvapkgemag
      181 hmtwplaalt dvagrgmlag lkllldahal ftgppshrlp allaesraaq advssrlagq
      241 vlaslhemlr gldaadparv ralaasdpqh lyeavltvll rlifilyaed rglmpsaggg
      301 aakllyeqgy algglhmrlr ddaalypdtm derrgawgrl lalfrlvsrg hpsgfmqprg
      361 gklfseaafp fllgrdapgn adrvlpvgdg cilrvldgll mlggervayr slsveqigsv
      421 yetvmgftve raagpmlair agkgnrvpvw vdldalagak pgerekllka wtgrgafpaa
      481 vsralaraed agalaaalap vvdgracprg savaagtpil qptderrrtg shytpkaltr
      541 pivahalapa fdrigadagp aevldlkvcd paagsgaflv eacrqlgerl vaawarwpaq
      601 rptippdede llhakrlvaq hclrgvdrnp laidlaklsl wletlasahe ftfldnvlrc
      661 gdslvglpnp kivavtwgkv sgqhsfveai vrdginaaad lrrlmrseae iapyavqegr
      721 hraaitaltr ahlvadavll sffegsgvrd rearlaevqq lvlapsaqsw srlealrerl
      781 halpvgitsf hwelefedvf trpnpgfdai vgnppfagkn tiaaghaaay pdwlktlhph
      841 ahgnadlaah ffrrafgllr rggafgliat ntirqgdtrd tglrrildeg gviyravsrh
      901 qwegdaavvv aqvfvrrgav aedtgavldg rpvrrisayl megdldgspa vlranagkaf
      961 qgsillgigf tfddanaakg kaselaamqr liadrpniae vvapylgade vnnspihahh
     1021 ryainfsdmp lrrmaegvsw nslngparae qlrcgvvapd yprsvaqdwp ealaivdrlv
     1081 rpvreqdnra vyrnrwwqya errvdlyrsi agqhhvlaig aaalahhafa rlpanliysh
     1141 klivfamprl sqfavlqsri heiwnrtfgs tfgdaptynp tqvfetfplp pghddapale
     1201 aagqayhdtr aalmiatgqg mtptynrfhr kadtgadieg lralhhtmdr avltaygwdd
     1261 laaeaepvfl dadseddhry qgrlfwpapf rdavlarllt lneeratmer ml
//
LOCUS       WP_235904184            1099 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 2 TIM barrel-domain containing protein
            [Arcticibacter tournemirensis].
ACCESSION   WP_235904184
VERSION     WP_235904184.1
KEYWORDS    RefSeq.
SOURCE      Arcticibacter tournemirensis
  ORGANISM  Arcticibacter tournemirensis
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.
REFERENCE   1  (residues 1 to 1099)
  AUTHORS   Jacobson,R.H., Zhang,X.J., DuBose,R.F. and Matthews,B.W.
  TITLE     Three-dimensional structure of beta-galactosidase from E. coli
  JOURNAL   Nature 369 (6483), 761-766 (1994)
   PUBMED   8008071
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02836.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Arcticibacter tournemirensis"
                     /db_xref="taxon:699437"
     Protein         1..1099
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=124806
     Region          28..1078
                     /region_name="Bgal_small_N"
                     /note="Beta galactosidase small chain; cl46900"
                     /db_xref="CDD:481240"
ORIGIN      
        1 mmrklfvfyv cfvmpglavk sqtvdglpaa ippvqgiynt epwedplvts inreparata
       61 ysfktekeal tgdrnkstrm lllngewdfs fafkpadaph dfykskvqgw qkievpsnwe
      121 lkgydipiyk savypfrpvd pprvpkdyna vgsyqrsfti padwkhmnit lhfggvssaf
      181 kvwvngkflg ygedsclpse fnvtpylqdg entvsvqvir wsdgayledq dhwrmsgiqr
      241 evmllaepkv riadfhwqak ldkhykdaif sirprienlt geevkgcvik aqlynkagqp
      301 vfqkalersa esiineiypr ldnvkfglle ttvknpdkws deepnlytlv lsladstgnv
      361 leaksckvgf rsiefsteng kllingkvty lygvnrhdhd pvkgkalsre dmrkdvetik
      421 rfnfncirts hypndpyfyd lcdeygilvm deanyethgl ggklsndpqw thafmerttr
      481 mvmrdknhps iiiwslgnea grgpsnaaqa awihdfditr pvhyepamgs hqlegyldps
      541 dprypksndh shrlqnpldq yyvdivsrfy pgiytpdllv nqkngdnrpi lfveyshsmg
      601 nstgnmkefw eifrsrprli ggciwdfkdq gilkkdsagv efyayggdfg ekrhdgnfci
      661 ngivasdgrp ksaifeckrv yqpaecelyd aerglvkvan rhavkslady avtlivrqdg
      721 kpvkvqslpr lslqagkdti isiekwfptf kqgceyladi hfslsrdepw aprgfevasn
      781 qfaltglakp sdaqkqyrav sftedaegyv csgsgfrikf skangalssy isdgkeeifs
      841 pllphftrpq tdndrrgwkp skklkewyen dlqlkgitge kqesglirik svytliggra
      901 svevvytvng egvvkvdysl npgtglpnip kvgmqcgirr eydlvnwygr gplenyidkr
      961 ygfdaavysl pvkefmepym ypqengnrtd vrwmylkkdk anegllvvad sllsmsawpy
     1021 teknieeakh tnklkdagfl tlnidliqmg vggndtwsdv sqplaqyqip akpyrygfyv
     1081 lparvkaeda geiskklkf
//
LOCUS       WP_235904194            1060 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6298 domain-containing protein [Arcticibacter tournemirensis].
ACCESSION   WP_235904194
VERSION     WP_235904194.1
KEYWORDS    RefSeq.
SOURCE      Arcticibacter tournemirensis
  ORGANISM  Arcticibacter tournemirensis
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040048.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19815.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Arcticibacter tournemirensis"
                     /db_xref="taxon:699437"
     Protein         1..1060
                     /product="DUF6298 domain-containing protein"
                     /calculated_mol_wt=117003
     Region          482..968
                     /region_name="DUF6298"
                     /note="Family of unknown function (DUF6298); pfam19815"
                     /db_xref="CDD:466197"
ORIGIN      
        1 mlpdksflfk ylfsaiigag liytgeaeaq kiktpkpipp laqgedgklv yspdsmgnri
       61 pdfsyagyma geksipdvav kvvvplregd atsriqtain yvsslpadkn girgavllek
      121 gtyevagslv ikaggvvlrg sgmghngtil ystgkereal irikgandrk eedsvgisda
      181 yvpvnsvkik vskgnlfrag dlvtirrpst aqwigklgty hfgggitslg wkpgemdlnw
      241 draitsvngn iltldapltt aieseygggt vsklqwngli sqcgvenmlc rsaydpgnlk
      301 dedhswmavt lenvtnawvr qvtfehfags avavletark itvedcksla pvseiggqrr
      361 ytfytlgqqt lfqrcyaekg yhdfavgfca tgpnafvqce shlpysfsgt idswasgvlf
      421 divnvdgqal sylnrgqdaq gagwtaansv fwqcsaarid cfapptannw afgcwaqfqg
      481 ngywnmsneh vdprslyyaq lserlgqdvm krayllsigt easssppvsv amqltelsak
      541 prtqltdwid ssairnpipv ttkgiksidq vgkkttpstp kapgmrlsng wilrgnsvvt
      601 ggrqdvpwwr gslqpnelka skpaitrfvp grtglgltdd ldevtewmkd srivalehny
      661 glwydrrrdd herirrmdge vwppfyeqpf arsgqgtawd glskydlkky nqfywtrlkh
      721 fadladqkgl vlvhqnyfqh niieagahya dfpwrtanni sdtgfpeppp yagdkrifma
      781 aqfydisnpa rrelhrayir qclnnfkdnt gviqligaef tgplhfvefw idvikeweke
      841 ngnnviigls ttkdvqdail adparasvvs lvdirywhyq adgnayapqg gqnlaprqha
      901 rllkpkrssf eqvyravsey hqrfpekaim ysgdswdafg waafmaggsi pkipsdidpa
      961 flsaaalmkp vpadpasgmy ilnggergsi iycaadkaae ldlrnyrgty klcwinpang
     1021 kiirkeesvk ggklvqvskp aggdavlwad idrgqlrmdn
//
LOCUS       WP_235904288             612 aa            linear   BCT 02-MAR-2025
DEFINITION  sialate O-acetylesterase [Arcticibacter tournemirensis].
ACCESSION   WP_235904288
VERSION     WP_235904288.1
KEYWORDS    RefSeq.
SOURCE      Arcticibacter tournemirensis
  ORGANISM  Arcticibacter tournemirensis
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.
REFERENCE   1  (residues 1 to 612)
  AUTHORS   Surolia,I., Pirnie,S.P., Chellappa,V., Taylor,K.N., Cariappa,A.,
            Moya,J., Liu,H., Bell,D.W., Driscoll,D.R., Diederichs,S.,
            Haider,K., Netravali,I., Le,S., Elia,R., Dow,E., Lee,A.,
            Freudenberg,J., De Jager,P.L., Chretien,Y., Varki,A.,
            MacDonald,M.E., Gillis,T., Behrens,T.W., Bloch,D., Collier,D.,
            Korzenik,J., Podolsky,D.K., Hafler,D., Murali,M., Sands,B.,
            Stone,J.H., Gregersen,P.K. and Pillai,S.
  TITLE     Functionally defective germline variants of sialic acid
            acetylesterase in autoimmunity
  JOURNAL   Nature 466 (7303), 243-247 (2010)
   PUBMED   20555325
REFERENCE   2  (residues 1 to 612)
  AUTHORS   Bitto,E., Bingman,C.A., McCoy,J.G., Allard,S.T., Wesenberg,G.E. and
            Phillips,G.N. Jr.
  TITLE     The structure at 1.6 Angstroms resolution of the protein product of
            the At4g34215 gene from Arabidopsis thaliana
  JOURNAL   Acta Crystallogr D Biol Crystallogr 61 (Pt 12), 1655-1661 (2005)
   PUBMED   16301800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015585.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03629.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Arcticibacter tournemirensis"
                     /db_xref="taxon:699437"
     Protein         1..612
                     /product="sialate O-acetylesterase"
                     /calculated_mol_wt=68074
     Region          227..>339
                     /region_name="LacZ"
                     /note="Beta-galactosidase/beta-glucuronidase [Carbohydrate
                     transport and metabolism]; COG3250"
                     /db_xref="CDD:442481"
     Region          <373..486
                     /region_name="SASA"
                     /note="Carbohydrate esterase, sialic acid-specific
                     acetylesterase; pfam03629"
                     /db_xref="CDD:427409"
ORIGIN      
        1 mvlqrnttlk lwgwaspgek ikirfngksv ntsagrdgkw naalpamkpg gpfemqltgk
       61 nsiilkdili gdvwlcsgqs nmvhqmgihn ityaediana nfleirqflv ptttslsgpr
      121 edvpqgrwkw anpedvrdfs avayffarhi yntyhipvgi inssvggtpi eawtsaeglk
      181 efssltaiik knqdttyvag lkraartvvv kndepdkgls apvkwfdtay vakgwrnini
      241 pgywedqgir dldgvvwyrk evivpasmtg kpgrlfmgri vdadvvyvng kqigstaymy
      301 pqrrysvppd alkpgknliv vrvqnnsgkg gfvpdkpyyl daegqkldlk gdwlykvgqv
      361 yrpvsrrsqp lgiseqnqpt alynamiapf cnypikgvlw yqgesnigng heyekllpal
      421 ikdwrarfss pglpfyyvql pnfgdasylp gesgsavvre aalktlkvpn tgmavtidlg
      481 ewndihpdnk kdvgdrlall arhftygekd lvysgplyrs seiqgnkvli sftntgsgli
      541 sidgeelsef avagadkkfv wararivgdk vevwsdevpn pkyvryawad npvqpnlynf
      601 eklpaspfrt ge
//
LOCUS       WP_235904322             413 aa            linear   BCT 02-MAR-2025
DEFINITION  adenine deaminase C-terminal domain-containing protein
            [Oliverpabstia intestinalis].
ACCESSION   WP_235904322
VERSION     WP_235904322.1
KEYWORDS    RefSeq.
SOURCE      Oliverpabstia intestinalis
  ORGANISM  Oliverpabstia intestinalis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Oliverpabstia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024774.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13382.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Oliverpabstia intestinalis"
                     /db_xref="taxon:2606633"
     Protein         1..413
                     /product="adenine deaminase C-terminal domain-containing
                     protein"
                     /calculated_mol_wt=46415
     Region          <27..405
                     /region_name="AdeC"
                     /note="Adenine deaminase [Nucleotide transport and
                     metabolism]; COG1001"
                     /db_xref="CDD:440625"
ORIGIN      
        1 mnyreiiren hleitkfldy lrqehpgyvi eghcpslvdl dlakflylgi ngdhtehtle
       61 evkqriengm ffeiqdkmlk pevlsyicen hlfeycsfvt ddtmadvlye qghlntvvqk
      121 aiemgfpkeq aiycatytpc qrmhfydrgv iapgkladfi llkdpaklle petvfkngis
      181 iykkedrhaf pvepyafped fyhsvsipev tlsdfdvkvp veegevtvra mevhpdrtqt
      241 teklvtmqvk ehkicwqesg cllamvlerh gkngnigygf ltgscqregt vattffhdhh
      301 nlfvagndpk dmlcavqrig elqggfltvk dgqilselal pvcgilseas ieatgsalke
      361 vreslidlgy ehhnpimsvg tlglpvspal kltdhglidv krgeivplvl scs
//
LOCUS       WP_235904403             194 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing protein [Oliverpabstia intestinalis].
ACCESSION   WP_235904403
VERSION     WP_235904403.1
KEYWORDS    RefSeq.
SOURCE      Oliverpabstia intestinalis
  ORGANISM  Oliverpabstia intestinalis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Oliverpabstia.
REFERENCE   1  (residues 1 to 194)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01966.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Oliverpabstia intestinalis"
                     /db_xref="taxon:2606633"
     Protein         1..194
                     /product="HD domain-containing protein"
                     /calculated_mol_wt=21495
     Region          2..194
                     /region_name="COG3294"
                     /note="Metal-dependent phosphatase/phosphodiesterase, HD
                     supefamily [General function prediction only]"
                     /db_xref="CDD:442523"
ORIGIN      
        1 mlgytdhsek hcaivakrag milkkfgyse heielaeiag alhdignain rknhgeygai
       61 laysllekld ipltdrgiiv saignhdkst wgavdavsav liladktdvr rnrvrneeks
      121 gfdkhdrvny avtnatvkvn vqkrsitlnl qidedictmy eyfeiflgrm mmcrkaaell
      181 gakfkltang skvl
//
LOCUS       WP_235904487             452 aa            linear   BCT 02-MAR-2025
DEFINITION  7TM diverse intracellular signaling domain-containing protein
            [Arcticibacter tournemirensis].
ACCESSION   WP_235904487
VERSION     WP_235904487.1
KEYWORDS    RefSeq.
SOURCE      Arcticibacter tournemirensis
  ORGANISM  Arcticibacter tournemirensis
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.
REFERENCE   1  (residues 1 to 452)
  AUTHORS   Anantharaman,V. and Aravind,L.
  TITLE     Application of comparative genomics in the identification and
            analysis of novel families of membrane-associated receptors in
            bacteria
  JOURNAL   BMC Genomics 4 (1), 34 (2003)
   PUBMED   12914674
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019315.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07695.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Arcticibacter tournemirensis"
                     /db_xref="taxon:699437"
     Protein         1..452
                     /product="7TM diverse intracellular signaling
                     domain-containing protein"
                     /calculated_mol_wt=51198
     Region          46..>129
                     /region_name="Glyco_hydro_2_N"
                     /note="Glycosyl hydrolases family 2, sugar binding domain;
                     pfam02837"
                     /db_xref="CDD:397120"
     Region          222..397
                     /region_name="7TMR-DISM_7TM"
                     /note="7TM diverse intracellular signalling; pfam07695"
                     /db_xref="CDD:429600"
     Region          <404..>441
                     /region_name="TMAO_torS"
                     /note="TMAO reductase sytem sensor TorS; TIGR02956"
                     /db_xref="CDD:274362"
ORIGIN      
        1 miamrslniv llllccsisy sfgsvapiak kgvldlrkqs fsteikldge wnfywnrflk
       61 pndftinrgi rvnfpskwne iaingktlpa fgfatyrlti llpkmneplr igmpdvycay
      121 qlfingklva vngkvstnkk dfvpyweyka vdilpgidtl nvilhianfs hknggisksl
      181 vigkksival krrqteaidl lltgclfmgg ffflglfllg nrdkailffs mysvvysyri
      241 igtenyilhs alpdiswyit irleyislfl giglfslftk slypkdvhdr vinvivticl
      301 sfaaaslcld piyftnlinp flilmvfcit ylpyvywvay knnrpgavys llssftlmpv
      361 fvisllhywg fipplqllsf agyvgffflq slvlsnrvsy tlkkaweeaq qgsvaksdfl
      421 stmsheirtp lnsvigmnhl llknnpredq as
//
LOCUS       WP_235904574             243 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing protein [Oliverpabstia intestinalis].
ACCESSION   WP_235904574
VERSION     WP_235904574.1
KEYWORDS    RefSeq.
SOURCE      Oliverpabstia intestinalis
  ORGANISM  Oliverpabstia intestinalis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Oliverpabstia.
REFERENCE   1  (residues 1 to 243)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01966.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Oliverpabstia intestinalis"
                     /db_xref="taxon:2606633"
     Protein         1..243
                     /product="HD domain-containing protein"
                     /calculated_mol_wt=28920
     Region          42..>164
                     /region_name="RnaY"
                     /note="HD superfamily phosphodieaserase, includes HD
                     domain of RNase Y [Translation, ribosomal structure and
                     biogenesis, General function prediction only]; COG1418"
                     /db_xref="CDD:441028"
ORIGIN      
        1 mpekmsanra rdsretirrk rrertkenle fyecirdivs hpavlemkky yqhcdtdcye
       61 hcldvaynny kicnklglda rsaarggmlh dlflydwreh skktgdrlha ithpitayrn
      121 ackyfhlnkv ekevitkhmw pvsvippryp etyvicltdk ycgsreimdh yakvlqnkyw
      181 gkpfawflkr ifekvprsdl lqemlpelvs meraasldss faqqrsrrss rwnhpsgrrp
      241 rrs
//
LOCUS       WP_235904587             105 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4143 domain-containing protein [Oliverpabstia intestinalis].
ACCESSION   WP_235904587
VERSION     WP_235904587.1
KEYWORDS    RefSeq.
SOURCE      Oliverpabstia intestinalis
  ORGANISM  Oliverpabstia intestinalis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Oliverpabstia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025019.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13635.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Oliverpabstia intestinalis"
                     /db_xref="taxon:2606633"
     Protein         1..105
                     /product="DUF4143 domain-containing protein"
                     /calculated_mol_wt=11718
     Region          <4..96
                     /region_name="COG1373"
                     /note="Predicted ATPase, AAA+ superfamily [General
                     function prediction only]"
                     /db_xref="CDD:440984"
ORIGIN      
        1 mvweeggife cavadalhkk gyqlyfykne ttkkeidvii qkdgkvvpid vksgntrans
       61 lksimknnkd isygykfidg nvgtseegii tlplymiaff dkvse
//
LOCUS       WP_235904605             194 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing protein [Oliverpabstia intestinalis].
ACCESSION   WP_235904605
VERSION     WP_235904605.1
KEYWORDS    RefSeq.
SOURCE      Oliverpabstia intestinalis
  ORGANISM  Oliverpabstia intestinalis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Oliverpabstia.
REFERENCE   1  (residues 1 to 194)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01966.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Oliverpabstia intestinalis"
                     /db_xref="taxon:2606633"
     Protein         1..194
                     /product="HD domain-containing protein"
                     /calculated_mol_wt=22254
     Region          <6..116
                     /region_name="HDOD"
                     /note="HDOD domain; pfam08668"
                     /db_xref="CDD:430141"
     Region          <25..>62
                     /region_name="HDOD"
                     /note="HD-like signal output (HDOD) domain, no enzymatic
                     activity [Signal transduction mechanisms]; COG1639"
                     /db_xref="CDD:441246"
ORIGIN      
        1 mmkipsieea erlieeasrl npgpwiehnr taglcartia ekcdglkpdv ayvmgllhdi
       61 grregimdmk hiyagylfms slgyddsari clthsfpykn igayngqndc seeeteyiqn
      121 yldmleyndy drliqlcdai sfpngptyve krlvdvvirr gfndltipkw kaflelkeyf
      181 dektgsdiyt llkv
//
LOCUS       WP_235904206            1020 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-L-arabinofuranosidase domain-containing protein [Arcticibacter
            tournemirensis].
ACCESSION   WP_235904206
VERSION     WP_235904206.1
KEYWORDS    RefSeq.
SOURCE      Arcticibacter tournemirensis
  ORGANISM  Arcticibacter tournemirensis
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.
REFERENCE   1  (residues 1 to 1020)
  AUTHORS   Ito,T., Saikawa,K., Kim,S., Fujita,K., Ishiwata,A., Kaeothip,S.,
            Arakawa,T., Wakagi,T., Beckham,G.T., Ito,Y. and Fushinobu,S.
  TITLE     Crystal structure of glycoside hydrolase family 127
            beta-l-arabinofuranosidase from Bifidobacterium longum
  JOURNAL   Biochem Biophys Res Commun 447 (1), 32-37 (2014)
   PUBMED   24680821
REFERENCE   2  (residues 1 to 1020)
  AUTHORS   Fujita,K., Takashi,Y., Obuchi,E., Kitahara,K. and Suganuma,T.
  TITLE     Characterization of a novel beta-L-arabinofuranosidase in
            Bifidobacterium longum: functional elucidation of a DUF1680 protein
            family member
  JOURNAL   J Biol Chem 289 (8), 5240-5249 (2014)
   PUBMED   24385433
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019556.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07944.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Arcticibacter tournemirensis"
                     /db_xref="taxon:699437"
     Protein         1..1020
                     /product="beta-L-arabinofuranosidase domain-containing
                     protein"
                     /calculated_mol_wt=113320
     Region          83..246
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          291..349
                     /region_name="Big_4"
                     /note="Bacterial Ig-like domain (group 4); pfam07532"
                     /db_xref="CDD:400079"
     Region          371..1016
                     /region_name="HybA1"
                     /note="Beta-L-arabinofuranosidase, GH127 family
                     [Carbohydrate transport and metabolism]; COG3533"
                     /db_xref="CDD:442754"
ORIGIN      
        1 mhrillhatl fvtfliqsvn takaqngdqi ldgigetgls aryvfngdvk dwsrnnfhak
       61 ahgagvnfvn dsrfgkvlsl pgdnssfvtl pggvftdies lsiscwvymr skqagqrlfd
      121 fgkdatrhff aaplgikaqa gfyavistgg dskneavapa ievnkwvhls ividvpskym
      181 ityvdskpva qtkniplelt tvfgerseek rllyigrsll pgepglaami hdfrvyrvpl
      241 srrqiagiyn nspgginent vnttakredd lpafpsgraq lyntylvnvp dvqveteags
      301 lprlpgyirg tyqsgkkgpe vrviwpaaid ntavlkpgqy tvtgriagta fqpkalvtvk
      361 epgksatpgl kletfaldrv slqtdahgha tkfienrdkf iktlaqtdpn sflymfrhaf
      421 gqkqpegakp lgvwdsqdtk lrghatghyl taiaqayast gydktlqanf sakmeymvns
      481 lyelaqlsgr akeagapyvs dpaavpqgpg kseydsdlsn tgirtdywnw gkgfisaypp
      541 dqfimlekga kygsqksqiw apyytlhkil aglidvyevs gnkkalaiat gmsdwvyvrl
      601 sklptetlik mwntyiagef ggmnesmahl yritanpnyl ktaqlfdnik vffgdeahsh
      661 glaknvdtfr glhanqhipq ivgsiemyrv sqnpeyykva dnfwykavnd ymysiggvag
      721 arnpanaecf iaqpatlyen gfseggqnet catynmlklt gdlflfdqra elmdyyergl
      781 ynhilasvak dspantyhvp lrpgsvkqfg nadmtgftcc ngtaiesstk lqsaiyfksk
      841 dnqalyvnly ipstlkwter kvtveqttnf peedktrlti kgsgkfdihv rvpgwatngf
      901 fvkingkeqq lhalpgsylk iarswkdgdi ielkmpfqfh ldpvmdqqni aslfygpill
      961 avqepearke wrkvsldadd isrsikgnpq qleftindvv fkpfyetygr hsvyvdvtlk
//
LOCUS       WP_235904633             974 aa            linear   BCT 02-MAR-2025
DEFINITION  GEVED domain-containing protein [Patiriisocius marinus].
ACCESSION   WP_235904633
VERSION     WP_235904633.1
KEYWORDS    RefSeq.
SOURCE      Patiriisocius marinus
  ORGANISM  Patiriisocius marinus
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Patiriisocius.
REFERENCE   1  (residues 1 to 974)
  AUTHORS   Back,C.R., Sztukowska,M.N., Till,M., Lamont,R.J., Jenkinson,H.F.,
            Nobbs,A.H. and Race,P.R.
  TITLE     The Streptococcus gordonii Adhesin CshA Protein Binds Host
            Fibronectin via a Catch-Clamp Mechanism
  JOURNAL   J Biol Chem 292 (5), 1538-1549 (2017)
   PUBMED   27920201
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039776.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20009.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..974
                     /organism="Patiriisocius marinus"
                     /db_xref="taxon:1397112"
     Protein         1..974
                     /product="GEVED domain-containing protein"
                     /calculated_mol_wt=105048
     Region          <525..735
                     /region_name="COG1572"
                     /note="Serine protease, subtilase family
                     [Posttranslational modification, protein turnover,
                     chaperones]"
                     /db_xref="CDD:441180"
     Region          795..877
                     /region_name="GEVED"
                     /note="GEVED domain; pfam20009"
                     /db_xref="CDD:466256"
     Region          899..973
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     cl46851"
                     /db_xref="CDD:481191"
ORIGIN      
        1 mklnqllllg ialvvsnvfa qqsfppdqvi tgtllgktga lrdfatmgpd efndpkthtm
       61 ipnisttqpq lnptstviqn lqteqgrvvt mpplqnfvga sasesgafpp dptgavgpnh
      121 yvhsvnslvk ifdktggllv gpvnlgaflg stsfgdpivl ydqladrwiv sgfgnlqvsn
      181 dllfgvsets dptgaynvys ytfsslpdyp hysvwhdgyy gtinlggfss lgvvmerdvm
      241 iaggpdpqil mfslpgivdn pnqvkspaaa nllgttvdts lpgyitylqd dawggigfdh
      301 lkvweisvdw ddinnsviss pqeiptdpfd agelfgdgng airqpgtsqr laghggiisy
      361 aanyrpfddh nswlvtfntf idnnetggir wielrnddtt tdwsifqegt fsiadghsrl
      421 mssaaidaag nigmayttas etlpvslryt grfnddplgq mtvaetviid gpgirnnanr
      481 ygdyshmtmd pdnftfwfts dyfsstnqwr tqiasfqlsg gfgvdvgpnn ittpvngalt
      541 atetvtvsir nfgldvqnti plelrldgvl vasetftgti nsnelgiytf aqtvdlstpg
      601 qtytlevttg lladeflpnn vfskevthlf sndigaieit apengsslgt evisvnlrnf
      661 gvapqtgfdv qysvngatav tetfvgtins eeeviydftt pfdfstlgty nivvrtllag
      721 dldatndets ldvenvlcsp ssdctlgdgf rlvqiaeinn psdcegygdf ttqianlgeg
      781 ssnsitftte ygdqnvkvwi dfnddldftt deivvpnfvi aagqaagsyt etttltvpag
      841 aafgehrmrv ksnwqaevdd dpcvesqyge tedytanigv lgtedfevan gdlvittlvn
      901 kqfevtlntq fdgsvflgvy nilgqemgfn kripkengiy klnldmssvs sgvyllkvgg
      961 qtttsyktar iivq
//
LOCUS       WP_235904634             460 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Patiriisocius marinus].
ACCESSION   WP_235904634
VERSION     WP_235904634.1
KEYWORDS    RefSeq.
SOURCE      Patiriisocius marinus
  ORGANISM  Patiriisocius marinus
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Patiriisocius.
REFERENCE   1  (residues 1 to 460)
  AUTHORS   Clarke,T.A., Edwards,M.J., Gates,A.J., Hall,A., White,G.F.,
            Bradley,J., Reardon,C.L., Shi,L., Beliaev,A.S., Marshall,M.J.,
            Wang,Z., Watmough,N.J., Fredrickson,J.K., Zachara,J.M., Butt,J.N.
            and Richardson,D.J.
  TITLE     Structure of a bacterial cell surface decaheme electron conduit
  JOURNAL   Proc Natl Acad Sci U S A 108 (23), 9384-9389 (2011)
   PUBMED   21606337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037016.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17963.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Patiriisocius marinus"
                     /db_xref="taxon:1397112"
     Protein         1..460
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=51525
     Region          140..455
                     /region_name="chp_HNE_0200"
                     /note="conserved hypothetical protein, HNE_0200 family;
                     TIGR03806"
                     /db_xref="CDD:163518"
ORIGIN      
        1 mksphilypl ifvlllsiis cnddeeqqye glpittsadf vvlnqgetlq isvlnndsnv
       61 sesgvltiet pahgtaiide ganidsvldn tilytandif lgetemfyti cnsatackte
      121 tikitvqatn avsvnlalvp yntlseynff etplnsltpv ggvlpyepis slfsdyahkk
      181 rfiwlppntk atyngeaepi efpvgsviik sffyenvlps ntqeiietrl mirkeegwtf
      241 aeyfwnedqt eafldtegdg gfkdvtfien giersftyhm psgsecftch knnavnqpig
      301 vkpqnlngdy lyndgiqnql qkwidigyle ntlptniatv vdyndvsqsl elrlrsyvdi
      361 ncaschrdeg hcnyrpmrfa fdengdpenl gvcvnpdqfl dglvdqklik pgdpensvif
      421 arlntleenl rmpllgrrli hdegielltn yinslsdscd
//
LOCUS       WP_235904682             753 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Patiriisocius marinus].
ACCESSION   WP_235904682
VERSION     WP_235904682.1
KEYWORDS    RefSeq.
SOURCE      Patiriisocius marinus
  ORGANISM  Patiriisocius marinus
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Patiriisocius.
REFERENCE   1  (residues 1 to 753)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Patiriisocius marinus"
                     /db_xref="taxon:1397112"
     Protein         1..753
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=84736
     Region          <362..732
                     /region_name="PRK11107"
                     /note="hybrid sensory histidine kinase BarA; Provisional"
                     /db_xref="CDD:236848"
ORIGIN      
        1 mpssiqlnkf lllllflvaf ngfgqtdskt kllttqdsin qvleyrknaa esistlnfty
       61 aidqltlank lvrnvnnlnl kadvlltnat lqyyfqnyeq askinieaid ilkisekres
      121 lsgayliqgl intrtnkfse adlfykksds ickitndekg ktslllargf nelkkgnptv
      181 avnyfnagit qfrnngtkyq eafclinkad allmlddsng hsylsqaets lkealtiidq
      241 kkytklkids yktaskislr kgqdslafsq lndyttklds ihiiyisais ssvdgdtsva
      301 elkkeikdyk ndlfekekse sfnsiinsls ialiailsll tlsfyknnnl rakannllqd
      361 kntelmmake kaekaslaka qflstithel rtplyavtgl thllieenpk ehqkehlnsl
      421 kfsgeyllsl innildlnkl eankvevekt tfdlkkrikd vlialkksad drktilklef
      481 ddnipkklsg dplklsqili nlvgnsvkft qngnvtvrvs kidqlnktvk lnfeiedngv
      541 giskkkqksi fetfsqgslq inrkfggtgl glsivknlle lmnskihles qlgqgskfwf
      601 nldidipeds aiaaqkeser dlvnydklkg knvlvvednk inqmitrkil eknkmtcqva
      661 dngtdaiklv qendfdivlm dihmpgisgi eatikirefn ttipiialta vtidenldef
      721 ykagfndiip kpfkpelffa kiyntlykee lnn
//
LOCUS       WP_235904807             841 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Eggerthella guodeyinii].
ACCESSION   WP_235904807
VERSION     WP_235904807.1
KEYWORDS    RefSeq.
SOURCE      Eggerthella guodeyinii
  ORGANISM  Eggerthella guodeyinii
            Bacteria; Bacillati; Actinomycetota; Coriobacteriia;
            Eggerthellales; Eggerthellaceae; Eggerthella.
REFERENCE   1  (residues 1 to 841)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 841)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 841)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 841)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Eggerthella guodeyinii"
                     /db_xref="taxon:2690837"
     Protein         1..841
                     /product="ATP-binding protein"
                     /calculated_mol_wt=92461
     Region          192..274
                     /region_name="HK_sensor"
                     /note="Sensor domains of Histidine Kinase receptors;
                     cl38916"
                     /db_xref="CDD:365792"
     Region          <404..839
                     /region_name="TMAO_torS"
                     /note="TMAO reductase sytem sensor TorS; TIGR02956"
                     /db_xref="CDD:274362"
ORIGIN      
        1 mkrvssarrv hifaftmlgi vllaaavvgy mklvqhvvye ecsghleeiy sqvnasfkdl
       61 vsknwnlldg wgyhidrtas seddlvaflq eeqgkwgftd fyfldkdgny ltfmgekgfl
      121 nldaqidrim idgnnavvda llpdgsslvv favparggsy refpydavav syntadmara
      181 idvnafdgqs dcyvtypdgr illsakeegp synfvdmlae rssladadle rlrkdladgs
      241 sgmvgyqldg tehylvyrpv gfqdwmmlgn vpvsvvnasm nqiqwatiav lvvvfapial
      301 ttvlfllhrn rrkldakela iecreqlfsm lvrnaddiyv mfspegfave yvspnvekll
      361 gvssdavkrd irvlsesavd psgdpgteai asleeggclq mhrerirptt gevrwyqetl
      421 yresikgvdk yvlvlsdrte erkssllleq aldiarssne aksqflanms hdirtpinai
      481 vgmtkiares geasekitsc ldaitvssrh llelindvld msriesgqle lqerrfdldd
      541 vvaeveaiir pqaqakcqdl hvdcsgvehk vfagdelris qillnlasna vkytqeggsi
      601 sfvvselekt rssyarlvfa ildngmgmsp efverifdpf erseevsisr iqgtglgmsi
      661 tkalidamgg vveiesevgs gsafrvtlel rlaspketrp plddasavep ydfegkrfll
      721 aednelnaei miellghrga evewaengea acdafarrpv gyydavlmdv mmpimngyea
      781 arairacaga cacaadvkii altanafaed vktaldagmd ahvakpvdid glagvlgric
      841 g
//
LOCUS       WP_235904842             289 aa            linear   BCT 02-MAR-2025
DEFINITION  putative manganese transporter [Eggerthella guodeyinii].
ACCESSION   WP_235904842
VERSION     WP_235904842.1
KEYWORDS    RefSeq.
SOURCE      Eggerthella guodeyinii
  ORGANISM  Eggerthella guodeyinii
            Bacteria; Bacillati; Actinomycetota; Coriobacteriia;
            Eggerthellales; Eggerthellaceae; Eggerthella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022889.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11449.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Eggerthella guodeyinii"
                     /db_xref="taxon:2690837"
     Protein         1..289
                     /product="putative manganese transporter"
                     /calculated_mol_wt=30412
     Region          14..279
                     /region_name="ArsP_2"
                     /note="Putative, 10TM heavy-metal exporter; cl12973"
                     /db_xref="CDD:472398"
ORIGIN      
        1 myialdvlvd avkdtiyvip flfitylame wlehktsgkt eaaiqragaa gpfigaivgv
       61 vpqcgfsaaa atlwagrvit lgtlfavfls tsdemlpifi aeqvpldvif kiigakiiig
      121 mimgflvdag lriarridmp lhihdlceqe hchchdgegg ilksalkhtl qvtlfiflit
      181 lalngllaav gedvlaeflg anpalsvfgs alvglvpnca asiviaqlyv egvlgsgaml
      241 agllvsagvg llvlvrtnrh lkenvaiiva lyamgviwgl ltnalgivf
//
LOCUS       WP_235904870             359 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase domain-containing protein [Eggerthella
            guodeyinii].
ACCESSION   WP_235904870
VERSION     WP_235904870.1
KEYWORDS    RefSeq.
SOURCE      Eggerthella guodeyinii
  ORGANISM  Eggerthella guodeyinii
            Bacteria; Bacillati; Actinomycetota; Coriobacteriia;
            Eggerthellales; Eggerthellaceae; Eggerthella.
REFERENCE   1  (residues 1 to 359)
  AUTHORS   Xiong,Y. and Eickbush,T.H.
  TITLE     Origin and evolution of retroelements based upon their reverse
            transcriptase sequences
  JOURNAL   EMBO J 9 (10), 3353-3362 (1990)
   PUBMED   1698615
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00078.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Eggerthella guodeyinii"
                     /db_xref="taxon:2690837"
     Protein         1..359
                     /product="reverse transcriptase domain-containing protein"
                     /calculated_mol_wt=41476
     Region          62..272
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            order(129..134,172..173,219,221..222,268..269)
                     /site_type="active"
                     /db_xref="CDD:238185"
     Site            order(129..134,172,221)
                     /site_type="other"
                     /note="NTP binding site [chemical binding]"
                     /db_xref="CDD:238185"
     Site            173
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:238185"
ORIGIN      
        1 mghllhayge fgrhrrgkrk fagffgrdpl dvaadarami eardlssigp isyfnrhepv
       61 tgkervigse camqqyldyv avtalqqlfd akigyhqcas irgkgqahal kylkrwvrss
      121 ssryyvkldv rkyynnidrd vlmgmlrrdv rnddllwlve aliathakgl nigsylsqyl
      181 anyylsgayr yaeglqkerk srrtgevtdv klvghvltym ddwvligwdk rdlkmavrrl
      241 vrymrdvlrl evkpwkpcai dcepidmigy vfrrtwtavr agiflrarra frsadralil
      301 tphlaarcla ywgyfkaact rhyrkahgir klvndckdvm smaqvernwy annlqlgaa
//
LOCUS       WP_235904897             304 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Eggerthella guodeyinii].
ACCESSION   WP_235904897
VERSION     WP_235904897.1
KEYWORDS    RefSeq.
SOURCE      Eggerthella guodeyinii
  ORGANISM  Eggerthella guodeyinii
            Bacteria; Bacillati; Actinomycetota; Coriobacteriia;
            Eggerthellales; Eggerthellaceae; Eggerthella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025124.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13749.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Eggerthella guodeyinii"
                     /db_xref="taxon:2690837"
     Protein         1..304
                     /product="ATP-binding protein"
                     /calculated_mol_wt=33981
     Region          112..200
                     /region_name="HATPase_c_4"
                     /note="Putative ATP-dependent DNA helicase recG
                     C-terminal; pfam13749"
                     /db_xref="CDD:463975"
ORIGIN      
        1 mevlksmqly grnyetgieg fnlaaalllg cddviasicp tyrtdailri enldryddri
       61 ivktnliday dllvafchkh lpdrfclmgd qsislrdvmv relisnslih refsspfptk
      121 vlierngfkt enasraffqg aidpnnfnpv pknpvianff nqiglaeemg sgtrnllkcs
      181 rlysgadpsf eegdtfkatv pltskeevas rdlqgegrra giteqaiiey aivslatdre
      241 sitvsdvves thktprtvqr flakmvreek llaegntrsr kyyatestfd eqanakasgy
      301 npkr
//
LOCUS       WP_235904956             557 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2079 domain-containing protein [Actinomyces marmotae].
ACCESSION   WP_235904956
VERSION     WP_235904956.1
KEYWORDS    RefSeq.
SOURCE      Actinomyces marmotae
  ORGANISM  Actinomyces marmotae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Actinomycetales; Actinomycetaceae; Actinomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021379.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09852.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Actinomyces marmotae"
                     /db_xref="taxon:2737173"
     Protein         1..557
                     /product="DUF2079 domain-containing protein"
                     /calculated_mol_wt=59770
     Region          75..552
                     /region_name="COG3463"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:442686"
ORIGIN      
        1 mspvpspdda vpprdggalp ipplpaappm ppgqcsppda gapgegagtt raiapeaeea
       61 ppfrltpprs fedlrdllpa altvligawv lisysvgqwr amtvpswdlg ifseaakays
      121 qlnapivpik gpgynllgdh fhpilvllgp lwalfpsglt llivqdllla vsawpivrla
      181 qrltqpvval algltyvlsw gfqgavaaqf heiafavpml afasaafver rwlavacwsa
      241 plvlvkedlg ltvlmiglav targlgelrr grlvrplgrl ttwqlglala tfgvimfflt
      301 tmvllpmlnp dgswaysigs gsdsgahqdl ltrlfspevk iqtlvvlalt agliglgspw
      361 iavvaptlaw rflgsvafyw ewknwhynav lipvaigall dvvaalkrrr srrpegpgwl
      421 aaplwarwla llglatpmll gavtasdlpl wqmnnrdfgk aperlasvka vydlipegst
      481 vetdlslmay lvpradvawv gtgreapqyv vidarssawg gnaprdaaaw iegrtgrtya
      541 lifnkddlqv arlvdtr
//
LOCUS       WP_235905085             417 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Tautonia marina].
ACCESSION   WP_235905085
VERSION     WP_235905085.1
KEYWORDS    RefSeq.
SOURCE      Tautonia marina
  ORGANISM  Tautonia marina
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Isosphaerales; Isosphaeraceae; Tautonia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Tautonia marina"
                     /db_xref="taxon:2653855"
     Protein         1..417
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=46765
     Region          <121..399
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mslvqsqtwl aespasteem alvvadagwh ttanlfraid rpnvsslllq ccdvanartk
       61 gipiwrwwgs rpepigpkqw sqqlvlppgw mkrypkigmk piqraidrwr rslpfdgpla
      121 lvmtyphyry lrdlvrpdlq vylnlddyal ywpaqadevr alerqlvaev dltacvaqar
      181 aeflrsvvpe aaarirhvph gtpeaflsqe vtgkagpaps dldhlprpll gyvggledrv
      241 dwpllirvae efpeasivli gkepkdesgg wyesarrcla lpnvhavgfr pqerlgeylr
      301 sfdaclipyr vdhpfnqvcc ptkimdfmgs grpivatnlp ecrlysgvid vatdtddflg
      361 aiaslsflqf ddgrewrrle lartnscrrv vgrlldalrp nlaepigirp rsaglat
//
LOCUS       WP_235905117             315 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Tautonia marina].
ACCESSION   WP_235905117
VERSION     WP_235905117.1
KEYWORDS    RefSeq.
SOURCE      Tautonia marina
  ORGANISM  Tautonia marina
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Isosphaerales; Isosphaeraceae; Tautonia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13407.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Tautonia marina"
                     /db_xref="taxon:2653855"
     Protein         1..315
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=33634
     Region          8..279
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mifisntnsd wwsavekgmq dggtefgaev slrrndgqvq gqidklrevl smpdvhgvai
       61 saleanapgv idamndlqka gkvvitidsd vdaahadarr ayigtnnaea grvagqalal
      121 lrpeggkmam fvgaasaana rareegvleg agdafertqt wedsgdhsra rqnvqsalsk
      181 tpdlgalvgl ysynatgiae emanspqvre rvtvvtfdld eaarphlnlg nidaticqnp
      241 yemgrlgvql lkaliekdda tvaeilpdgk yrdtgvrivv pqtespvsel rddglevlti
      301 demnswlesk glqst
//
LOCUS       WP_235905179             331 aa            linear   BCT 02-MAR-2025
DEFINITION  protein kinase domain-containing protein, partial [Actinomyces
            marmotae].
ACCESSION   WP_235905179
VERSION     WP_235905179.1
KEYWORDS    RefSeq.
SOURCE      Actinomyces marmotae
  ORGANISM  Actinomyces marmotae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Actinomycetales; Actinomycetaceae; Actinomyces.
REFERENCE   1  (residues 1 to 331)
  AUTHORS   Hunter,T. and Plowman,G.D.
  TITLE     The protein kinases of budding yeast: six score and more
  JOURNAL   Trends Biochem Sci 22 (1), 18-22 (1997)
   PUBMED   9020587
REFERENCE   2  (residues 1 to 331)
  AUTHORS   Hanks,S.K. and Hunter,T.
  TITLE     Protein kinases 6. The eukaryotic protein kinase superfamily:
            kinase (catalytic) domain structure and classification
  JOURNAL   FASEB J 9 (8), 576-596 (1995)
   PUBMED   7768349
REFERENCE   3  (residues 1 to 331)
  AUTHORS   Hanks,S.K. and Quinn,A.M.
  TITLE     Protein kinase catalytic domain sequence database: identification
            of conserved features of primary structure and classification of
            family members
  JOURNAL   Methods Enzymol 200, 38-62 (1991)
   PUBMED   1956325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00069.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Actinomyces marmotae"
                     /db_xref="taxon:2737173"
     Protein         1..>331
                     /product="protein kinase domain-containing protein"
                     /GO_function="GO:0004672 - protein kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006468 - protein phosphorylation
                     [Evidence IEA]"
     Region          7..>266
                     /region_name="PknB_PASTA_kin"
                     /note="Stk1 family PASTA domain-containing Ser/Thr kinase;
                     NF033483"
                     /db_xref="CDD:468045"
ORIGIN      
        1 mshdpltgri vdsryevgqr varggmatvy kahdrrlerd valklmhahl adspdfvarf
       61 rrearaaarl snpgvvavyd qgaidgiayi imeyvpgptl rdriasgplt vaealemtsh
      121 vlrplgaahr aglmhrdikp envllpadgs vpkvadfgla ravteatqts tgnilgtvay
      181 lapelitsga stpradvysv gvmlfelltg eqpfsadtpi qiafrnvhen ipapstradg
      241 ipaavdglva smtarapqer lanaddalra vreaaaeavd eagadgapat gaaaaigaml
      301 saamgaagee gasratsppg assgaettsa d
//
LOCUS       WP_235905203             692 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1800 family protein [Actinomyces marmotae].
ACCESSION   WP_235905203
VERSION     WP_235905203.1
KEYWORDS    RefSeq.
SOURCE      Actinomyces marmotae
  ORGANISM  Actinomyces marmotae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Actinomycetales; Actinomycetaceae; Actinomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020390.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08811.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Actinomyces marmotae"
                     /db_xref="taxon:2737173"
     Protein         1..692
                     /product="DUF1800 family protein"
                     /calculated_mol_wt=71685
     Region          224..667
                     /region_name="DUF1800"
                     /note="Protein of unknown function (DUF1800); cl22733"
                     /db_xref="CDD:473972"
ORIGIN      
        1 mpraeslser pmsdgpapag prhagggtas tvgsrrvala alstaavgav gglsallwes
       61 gpgssssaaa mggpasgegg plalpdalkr tvaggdegda gdtspdpsaa gsgtndadga
      121 sgvrgaggar dgsgvsddga qaaspaqagt ggaaqaggta qagagaagan sgeapfssgs
      181 gsapetaktd aldvyrkapg tadleassgl apglrlrtss awhlarrasi aataeiasdi
      241 etmgatawid rqlapegidd tyaeslvsrh ygwsrlsale ikritgdhsa kaspsvinaa
      301 ltrmrfgnrv laesvvelma dhvyvpihgk gepfitefdv llrkhalgry adllyaavtn
      361 aallreldnt astkdnpnen lgrellelyt vgrdsyseed vkastriltg ngndwttmsy
      421 vyrpeqhavg svdvlgfsda ntdasagqrm lkryvehlch lrptalrlak riarryiade
      481 psdaaveaia kayldndtsi asavkaalth pdfaasvgrk wrrptefymt iaraaharva
      541 vahgdvnvgd yfnlgtygwl ikeagheprm ygtvdgypdt aeywmsagit malwngaqna
      601 vdgdkresgr tdwptalsia agqpaletar ritwhltgya wadaelsgva evlaglpgtg
      661 taatwtvtdk hlpafaehav rlcfcspyal lr
//
LOCUS       WP_235905207             213 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: CDP-alcohol phosphatidyltransferase family protein
            [Actinomyces].
ACCESSION   WP_235905207
VERSION     WP_235905207.1
KEYWORDS    RefSeq.
SOURCE      Actinomyces
  ORGANISM  Actinomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Actinomycetales; Actinomycetaceae.
REFERENCE   1  (residues 1 to 213)
  AUTHORS   Morein,S., Trouard,T.P., Hauksson,J.B., Rilfors,L., Arvidson,G. and
            Lindblom,G.
  TITLE     Two-dimensional 1H-NMR of transmembrane peptides from Escherichia
            coli phosphatidylglycerophosphate synthase in micelles
  JOURNAL   Eur J Biochem 241 (2), 489-497 (1996)
   PUBMED   8917447
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013250.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01066.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Actinomyces"
                     /db_xref="taxon:1654"
     Protein         1..213
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0016780 - phosphotransferase activity,
                     for other substituted phosphate groups [Evidence IEA]"
                     /GO_process="GO:0008654 - phospholipid biosynthetic
                     process [Evidence IEA]"
                     /calculated_mol_wt=21488
     Region          <68..199
                     /region_name="PgsA"
                     /note="Phosphatidylglycerophosphate synthase [Lipid
                     transport and metabolism]; COG0558"
                     /db_xref="CDD:440324"
ORIGIN      
        1 mlslyslkhw ytrrltflin asvrhgispd awtlagviag algagaiamg wwplafllla
       61 arlgganldg avarargvsr pfgfvlneig drasdllmma glvglgarig apqativall
      121 iaalaatlpt fislsaagag aprlnggplg ktercliavv asavpswlap aawlliagsi
      181 ltagtrlara hrllpspgar pevgsplgag paq
//
LOCUS       WP_235905238             524 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ammonia-forming cytochrome c nitrite reductase
            subunit c552 [Actinomyces].
ACCESSION   WP_235905238
VERSION     WP_235905238.1
KEYWORDS    RefSeq.
SOURCE      Actinomyces
  ORGANISM  Actinomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Actinomycetales; Actinomycetaceae.
REFERENCE   1  (residues 1 to 524)
  AUTHORS   Einsle,O., Messerschmidt,A., Stach,P., Bourenkov,G.P.,
            Bartunik,H.D., Huber,R. and Kroneck,P.M.
  TITLE     Structure of cytochrome c nitrite reductase
  JOURNAL   Nature 400 (6743), 476-480 (1999)
   PUBMED   10440380
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02335.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Actinomyces"
                     /db_xref="taxon:1654"
     Protein         1..524
                     /product="ammonia-forming cytochrome c nitrite reductase
                     subunit c552"
                     /GO_component="GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /GO_function="GO:0042279 - nitrite reductase (cytochrome,
                     ammonia-forming) activity [Evidence IEA]"
                     /GO_process="GO:0008152 - metabolic process [Evidence
                     IEA]"
                     /calculated_mol_wt=57788
     Region          49..506
                     /region_name="NrfA"
                     /note="Formate-dependent nitrite reductase, periplasmic
                     cytochrome c552 subunit [Inorganic ion transport and
                     metabolism]; COG3303"
                     /db_xref="CDD:442532"
     Site            order(95,99,102..103,106,158..159,161..164,166..167,
                     170..171,174,176,182,186,189..190,230..232,235..236,243,
                     274,278,281..282,285..286,289,291,337,339,343,347..348,
                     355,358..360,362,370..371,373,377..379,385..386,389..390,
                     397,401,404,460,464..465)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:349426"
     Site            order(161..164,166..167,170,189..190,230,281..282,
                     285..286,355,359..360)
                     /site_type="active"
                     /db_xref="CDD:349426"
     Site            order(347,350..351,391,396,400,403,407,411,414,418,
                     466..469,471..472,474..476,478..480,482..483,485..486,489)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:349426"
     Region          412..429
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:349426"
     Region          439..456
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:349426"
     Region          474..489
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:349426"
ORIGIN      
        1 mdtadqspeg laaeverdsa tspardarpg eraarhkrsf frgpvfmvll mavvagatfv
       61 vtmllmsinn hqaegsrafy nvaqldetsy dpavwgqnyp vqyadykkta eftpaehagk
      121 mvphsvegdp rtevksqkle edprlvkmws gyafavdyrh arghayttvd qqytlrnakd
      181 qqpgtcanch vsapalydkl gngdreagfe atgtmklsqv ladesvshpv acidchdpkt
      241 malrvtrpsf mrgikalkas qgvsdfevnk datpqemrty vcaqchveyy fkgenkvltf
      301 pwdkgididn iysyyqeqgf tdwthektga pmlkaqhpef diwsnsvhaa ngvgcadchm
      361 nykrvgsgkv snhhvttpmk dvnascgtch ktgdgviekr vrtiqanfis srdrafdtlv
      421 glisdleaak sdgtspeqia laqqyqrkas fyldyvysen sygfhapdye qriinqaeha
      481 aqngrlaltg ktaeelkdsd vstanaehyp sdkaasgasr gsgh
//
LOCUS       WP_235905274             251 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1326 domain-containing protein [Tautonia marina].
ACCESSION   WP_235905274
VERSION     WP_235905274.1
KEYWORDS    RefSeq.
SOURCE      Tautonia marina
  ORGANISM  Tautonia marina
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Isosphaerales; Isosphaeraceae; Tautonia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018712.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07040.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Tautonia marina"
                     /db_xref="taxon:2653855"
     Protein         1..251
                     /product="DUF1326 domain-containing protein"
                     /calculated_mol_wt=26824
     Region          40..>157
                     /region_name="DUF1326"
                     /note="Protein of unknown function (DUF1326); cl02375"
                     /db_xref="CDD:470557"
ORIGIN      
        1 mylcpfdsir akefhpmrti fsalcgalic saavasesvq vhgdyleart advftgpcfs
       61 naevfivgdr avmawkvreg swegvdlsgl svaaavrgtt tfsedrpeqa lavlivdera
      121 dnqqraalvk maqrlggtrl gqvvdvkvsa idldidehch meaagpahkh hlmpmappar
      181 faaeglaeis trpldandci cgneviayqp lsegvevqpa ytvahtfrgt glgstwaapn
      241 arssfvgqfa y
//
LOCUS       WP_235905370             166 aa            linear   BCT 02-MAR-2025
DEFINITION  DinB family protein [Tautonia marina].
ACCESSION   WP_235905370
VERSION     WP_235905370.1
KEYWORDS    RefSeq.
SOURCE      Tautonia marina
  ORGANISM  Tautonia marina
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Isosphaerales; Isosphaeraceae; Tautonia.
REFERENCE   1  (residues 1 to 166)
  AUTHORS   Cooper,D.R., Grelewska,K., Kim,C.Y., Joachimiak,A. and
            Derewenda,Z.S.
  TITLE     The structure of DinB from Geobacillus stearothermophilus: a
            representative of a unique four-helix-bundle superfamily
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 66 (Pt 3), 219-224
            (2010)
   PUBMED   20208147
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024273.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12867.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Tautonia marina"
                     /db_xref="taxon:2653855"
     Protein         1..166
                     /product="DinB family protein"
                     /calculated_mol_wt=18466
     Region          <17..154
                     /region_name="MDMPI_N"
                     /note="Mycothiol maleylpyruvate isomerase N-terminal
                     domain; cl21506"
                     /db_xref="CDD:473890"
ORIGIN      
        1 mtlndlidhy ekggpllaya msslsreqet arpgpgawsl aelaihllds dlvagdrikr
       61 viaedaptll aydenawcar ldyqslpvee avsmfvanrr wiahilrslp esdfarsgnh
      121 tergrvtlad lvrssvghld hhlaflyakr gnlgvsiypr yrmvpe
//
LOCUS       WP_235904795             226 aa            linear   BCT 02-MAR-2025
DEFINITION  molecular chaperone TorD family protein [Eggerthella guodeyinii].
ACCESSION   WP_235904795
VERSION     WP_235904795.1
KEYWORDS    RefSeq.
SOURCE      Eggerthella guodeyinii
  ORGANISM  Eggerthella guodeyinii
            Bacteria; Bacillati; Actinomycetota; Coriobacteriia;
            Eggerthellales; Eggerthellaceae; Eggerthella.
REFERENCE   1  (residues 1 to 226)
  AUTHORS   Ilbert,M., Mejean,V., Giudici-Orticoni,M.T., Samama,J.P. and
            Iobbi-Nivol,C.
  TITLE     Involvement of a mate chaperone (TorD) in the maturation pathway of
            molybdoenzyme TorA
  JOURNAL   J Biol Chem 278 (31), 28787-28792 (2003)
   PUBMED   12766163
REFERENCE   2  (residues 1 to 226)
  AUTHORS   Pantel,I., Lindgren,P.E., Neubauer,H. and Gotz,F.
  TITLE     Identification and characterization of the Staphylococcus carnosus
            nitrate reductase operon
  JOURNAL   Mol Gen Genet 259 (1), 105-114 (1998)
   PUBMED   9738886
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014651.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02613.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Eggerthella guodeyinii"
                     /db_xref="taxon:2690837"
     Protein         1..226
                     /product="molecular chaperone TorD family protein"
                     /calculated_mol_wt=24905
ORIGIN      
        1 mmedevmfsv lsacfapvde dewkrvvagt awpdfldaar ralqddgalg tsptpisear
       61 rrcplqdfls vgevdalfrp psyeekrafa arhftgglpe sampveslyr lrpvgapssp
      121 larrdgsymg dsasymqdlv erlglevppq faacpdhlal eldllavllr sglqseartf
      181 laerfawlta yrmrllalkd dasfyiglvd vlmgiwaqks pvemsa
//
LOCUS       WP_235905374             628 aa            linear   BCT 02-MAR-2025
DEFINITION  InlB B-repeat-containing protein [Eggerthella guodeyinii].
ACCESSION   WP_235905374
VERSION     WP_235905374.1
KEYWORDS    RefSeq.
SOURCE      Eggerthella guodeyinii
  ORGANISM  Eggerthella guodeyinii
            Bacteria; Bacillati; Actinomycetota; Coriobacteriia;
            Eggerthellales; Eggerthellaceae; Eggerthella.
REFERENCE   1  (residues 1 to 628)
  AUTHORS   Bleymuller,W.M., Lammermann,N., Ebbes,M., Maynard,D., Geerds,C. and
            Niemann,H.H.
  TITLE     MET-activating Residues in the B-repeat of the Listeria
            monocytogenes Invasion Protein InlB
  JOURNAL   J Biol Chem 291 (49), 25567-25577 (2016)
   PUBMED   27789707
REFERENCE   2  (residues 1 to 628)
  AUTHORS   Ebbes,M., Bleymuller,W.M., Cernescu,M., Nolker,R., Brutschy,B. and
            Niemann,H.H.
  TITLE     Fold and function of the InlB B-repeat
  JOURNAL   J Biol Chem 286 (17), 15496-15506 (2011)
   PUBMED   21345802
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021028.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09479.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Eggerthella guodeyinii"
                     /db_xref="taxon:2690837"
     Protein         1..628
                     /product="InlB B-repeat-containing protein"
                     /calculated_mol_wt=67368
     Region          <87..>117
                     /region_name="GBS_Bsp-like"
                     /note="GBS Bsp-like repeat; pfam08481"
                     /db_xref="CDD:400671"
     Region          188..>241
                     /region_name="Flg_new"
                     /note="Listeria-Bacteroides repeat domain (List_Bact_rpt);
                     pfam09479"
                     /db_xref="CDD:462813"
ORIGIN      
        1 mlkrekqrvm rtllaaavll casfglaale tgeafaysyr ttdtatiynr awirvdpsad
       61 yleligsdpi gprfdmpswn apggihsrie syqfavwgda ggqddlawya ggngrwtrag
      121 avmgsgkldg sgngngfgci atygygwggs viskhgglda lmychvyldn adygrnfygs
      181 vdfwprvkiq ydanggtgap aahykyigtt anisskkptr vgytfegwst skngvvniap
      241 gqrigyedwn llqctnlphd wagssptaff rdeaagqpsp tgtnliplya vwkpiaytvs
      301 yngngatggs talsshvyda skaltangfr rsytltcdsq ggsagvtrln cawgwkswnt
      361 radgggasyg dcasvrnlrt ttgavnlyaq wnegvvelpd pgtkadcafk gwydaasggs
      421 ligkigdrvs igssatyyaq wqpyarvayy adgssapvfs esvevgssyr anaqaitqat
      481 kpdcagfegw yldagctqpf aegsavpdag lalygrnrvt vsyaltdrtv alfadhelfa
      541 degrleplah gielpqqral fygdrlsfdr gdnvwfeqhd rmreatcepg ayatpagegs
      601 parsaritrn tvaylqwavp vydgitls
//
LOCUS       WP_235905399             393 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-grasp domain-containing protein [Tautonia marina].
ACCESSION   WP_235905399
VERSION     WP_235905399.1
KEYWORDS    RefSeq.
SOURCE      Tautonia marina
  ORGANISM  Tautonia marina
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Isosphaerales; Isosphaeraceae; Tautonia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014686.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02655.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Tautonia marina"
                     /db_xref="taxon:2653855"
     Protein         1..393
                     /product="ATP-grasp domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=42783
     Region          2..377
                     /region_name="PylC"
                     /note="Pyrrolysine biosynthesis ligase PylC and related
                     enzymes, ATP-grasp superfamily [Amino acid transport and
                     metabolism]; COG2232"
                     /db_xref="CDD:441833"
ORIGIN      
        1 mvlivgasvr aaafsalrag fdpvaidlfa dwdlqhvcqa hrlepanype glatqtallp
       61 rspwcytgai enhpdlidri trdrplwgns gevvrrvrdp faltdllrrf glpavdtrrh
      121 srglptdgsw lvkrlrsagg ahirpfiane pgpsegiecl qrrligpsgs avfvgtrggs
      181 arlvgvtrqw ighegaafgy lgslgpvrva rnvqtqlqql gavlagefel rglfgvdfvl
      241 shgkawpvev nprptasvev lewatgrslf rehaeafnae daenvydghe tcpdhrpmkv
      301 gklvvfapve grvpdamtwk vvdprsgpwp kladlpppgt vfqpgqpvlt lldaaatasa
      361 crsrlirrla rwrtrlrswg eatepppnag qhg
//
LOCUS       WP_235905401             242 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Actinomyces
            marmotae].
ACCESSION   WP_235905401
VERSION     WP_235905401.1
KEYWORDS    RefSeq.
SOURCE      Actinomyces marmotae
  ORGANISM  Actinomyces marmotae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Actinomycetales; Actinomycetaceae; Actinomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Actinomyces marmotae"
                     /db_xref="taxon:2737173"
     Protein         1..242
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=25013
     Region          28..241
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mtqaqppgag prsdssaspa qpaaprlrvl vvddhalvrs gvrselaaha pdieviaead
       61 dvegaiaavr alapdvalld vhlpggnggg gaevaascad aegtrflals vsdaaedvva
      121 viragargyv tkaistpdla mairrvaagd aafsprlagf vldafgaqag evamadsefd
      181 rlsarerevm rliargytyk ecagelfisv ktvethvsav lrklqlsnrn eltrwaaahr
      241 iv
//
LOCUS       WP_235905530             461 aa            linear   BCT 02-MAR-2025
DEFINITION  protein kinase domain-containing protein [Tautonia marina].
ACCESSION   WP_235905530
VERSION     WP_235905530.1
KEYWORDS    RefSeq.
SOURCE      Tautonia marina
  ORGANISM  Tautonia marina
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Isosphaerales; Isosphaeraceae; Tautonia.
REFERENCE   1  (residues 1 to 461)
  AUTHORS   Hunter,T. and Plowman,G.D.
  TITLE     The protein kinases of budding yeast: six score and more
  JOURNAL   Trends Biochem Sci 22 (1), 18-22 (1997)
   PUBMED   9020587
REFERENCE   2  (residues 1 to 461)
  AUTHORS   Hanks,S.K. and Hunter,T.
  TITLE     Protein kinases 6. The eukaryotic protein kinase superfamily:
            kinase (catalytic) domain structure and classification
  JOURNAL   FASEB J 9 (8), 576-596 (1995)
   PUBMED   7768349
REFERENCE   3  (residues 1 to 461)
  AUTHORS   Hanks,S.K. and Quinn,A.M.
  TITLE     Protein kinase catalytic domain sequence database: identification
            of conserved features of primary structure and classification of
            family members
  JOURNAL   Methods Enzymol 200, 38-62 (1991)
   PUBMED   1956325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00069.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Tautonia marina"
                     /db_xref="taxon:2653855"
     Protein         1..461
                     /product="protein kinase domain-containing protein"
                     /GO_function="GO:0004672 - protein kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006468 - protein phosphorylation
                     [Evidence IEA]"
                     /calculated_mol_wt=50457
     Region          16..113
                     /region_name="FHA"
                     /note="Forkhead associated (FHA) domain, binds pSer, pThr,
                     pTyr [Signal transduction mechanisms]; COG1716"
                     /db_xref="CDD:441322"
     Region          190..458
                     /region_name="STKc_PknB_like"
                     /note="Catalytic domain of bacterial Serine/Threonine
                     kinases, PknB and similar proteins; cd14014"
                     /db_xref="CDD:270916"
     Site            order(190,214..215,244,249,254..257,269)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:270916"
     Site            order(197..198,200..203,205,218,220,252,268..271,275,277,
                     315,317,319..320,322,336..337,340,360..363)
                     /site_type="active"
                     /db_xref="CDD:270916"
     Site            order(197..198,200..203,205,218,220,252,268..271,275,317,
                     319..320,322,336..337)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270916"
     Site            order(201,275,277,315,317,319,340,360..363)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270916"
     Site            order(336..341,345..347,356..363)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270916"
ORIGIN      
        1 msavprtmpe rstsfrvvle ivegpragrs fvveraepfv vgrsllvdgs vpedsslsrd
       61 hfelrvtsgg dltlrdlrst ngtfvndrpv ersrlvhgdr imagetvfrv qieasggmpg
      121 llrpdevgta ehdrppvsfa pivcggcgis apqgtlvaqd eqegrgpesv ywlcdncrae
      181 mamtpqpvph yktlrelgrg amgvvylaqh srtgrkvalk livpesaaar saidrflrem
      241 tvisklkhpn ivewleqgts ggrfwfamey vdgsnleava raaqgqypid qgcrmaaqil
      301 kgldhahrqg fvhrdikpen iligrtpsgl lsvkisdfgl aksyrsigls gltfsgemrg
      361 tipfmppeqm ldfktvkpsg diyattatly flltgqfihd hvgegidvvq lvleqapipi
      421 rerrpeippq laavidrgls rdpadrfpsa salrqalrpf c
//
LOCUS       WP_235905539             188 aa            linear   BCT 02-MAR-2025
DEFINITION  thioredoxin family protein [Tautonia marina].
ACCESSION   WP_235905539
VERSION     WP_235905539.1
KEYWORDS    RefSeq.
SOURCE      Tautonia marina
  ORGANISM  Tautonia marina
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Isosphaerales; Isosphaeraceae; Tautonia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025946.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14595.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Tautonia marina"
                     /db_xref="taxon:2653855"
     Protein         1..188
                     /product="thioredoxin family protein"
                     /calculated_mol_wt=20907
     Region          14..129
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
     Site            order(64,67)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239245"
ORIGIN      
        1 midwgkvfge algyqeflak ygseaergkw aaihdrvglt edqkgviggf vrkmpvlcla
       61 gtwcgdcvyq cpildhigaa npsaieiryl drdalpevsd llrindgrrv ptvvflsedf
      121 fevarfgdrt lsryrklatd qlgpscptgl vpppddelac vtsewvdqfe rahlilrlsg
      181 rlrekhgd
//
LOCUS       WP_235905541             157 aa            linear   BCT 02-MAR-2025
DEFINITION  TadE/TadG family type IV pilus assembly protein [Actinomyces
            marmotae].
ACCESSION   WP_235905541
VERSION     WP_235905541.1
KEYWORDS    RefSeq.
SOURCE      Actinomyces marmotae
  ORGANISM  Actinomyces marmotae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Actinomycetales; Actinomycetaceae; Actinomyces.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Kachlany,S.C., Planet,P.J., DeSalle,R., Fine,D.H. and Figurski,D.H.
  TITLE     Genes for tight adherence of Actinobacillus actinomycetemcomitans:
            from plaque to plague to pond scum
  JOURNAL   Trends Microbiol 9 (9), 429-437 (2001)
   PUBMED   11553455
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019428.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07811.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Actinomyces marmotae"
                     /db_xref="taxon:2737173"
     Protein         1..157
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /calculated_mol_wt=15949
ORIGIN      
        1 mrserlgprr pdaprpprsr rgsgrgngee gsaiaefvmv gslviavava llqlalglya
       61 rnvlidaage garraalagg teeeaaarvr altgaaladd yvtdvrvrra vrdglpvvev
      121 evsapmpvlg llgpggslrv sghaldesal aragatp
//
LOCUS       WP_235905553             398 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Tautonia marina].
ACCESSION   WP_235905553
VERSION     WP_235905553.1
KEYWORDS    RefSeq.
SOURCE      Tautonia marina
  ORGANISM  Tautonia marina
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Isosphaerales; Isosphaeraceae; Tautonia.
REFERENCE   1  (residues 1 to 398)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 398)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Tautonia marina"
                     /db_xref="taxon:2653855"
     Protein         1..398
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=43964
     Region          8..393
                     /region_name="PRK09148"
                     /note="LL-diaminopimelate aminotransferase"
                     /db_xref="CDD:181674"
ORIGIN      
        1 mpievsarvk nlppylfgki nalkaqkrra gddvidlgmg nptdppeswv vdklceaard
       61 arnhrysvaq gidnlrreva kryesrfgvs ldpdeeivtt igskegfshm clallgpgdt
      121 alapaptfpi hahavalana nvialditdp qrflanvaem cthlyprpkv lilnyphnpt
      181 atvvepaffe eivslarrfh favihdfayg digfdgyepp sflaakgakd vgcefttmsk
      241 gynmagwrvg faagnramin alksikgyyd yglfqavqia aivalrhgee arraqvleyq
      301 krrdvlvegl nrqgwnvprp kagmfvwapi pepwrsrmgs idfamkliee advavspgrg
      361 fgdagegflr lalvendqrl rqavrqitrc lrneskda
//
LOCUS       WP_235905556            1250 aa            linear   BCT 02-MAR-2025
DEFINITION  HEAT repeat domain-containing protein [Tautonia marina].
ACCESSION   WP_235905556
VERSION     WP_235905556.1
KEYWORDS    RefSeq.
SOURCE      Tautonia marina
  ORGANISM  Tautonia marina
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Isosphaerales; Isosphaeraceae; Tautonia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025030.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13646.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1250
                     /organism="Tautonia marina"
                     /db_xref="taxon:2653855"
     Protein         1..1250
                     /product="HEAT repeat domain-containing protein"
                     /calculated_mol_wt=132642
     Region          38..375
                     /region_name="Piru_Ver_Nterm"
                     /note="putative membrane-bound dehydrogenase domain;
                     TIGR02604"
                     /db_xref="CDD:274225"
     Region          <382..748
                     /region_name="FAD_binding_2"
                     /note="FAD binding domain; cl46878"
                     /db_xref="CDD:481218"
     Region          433..559
                     /region_name="HEAT"
                     /note="HEAT repeat [General function prediction only];
                     COG1413"
                     /db_xref="CDD:441023"
     Site            order(434..435,438,441..442,465..466,469,496..497,500,
                     503..504,507,527..528,531,534..535,555..556,559)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          478..507
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          509..535
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(673..674,677,680..681,713..714,717,720..721,737,
                     776..777,780,783..784,816,842..843,846,849..850,873..874,
                     877)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          694..737
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          746..907
                     /region_name="HEAT"
                     /note="HEAT repeat [General function prediction only];
                     COG1413"
                     /db_xref="CDD:441023"
     Region          747..817
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          826..850
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          854..879
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1103..1241
                     /region_name="CxxCH_TIGR02603"
                     /note="putative heme-binding domain,
                     Pirellula/Verrucomicrobium type; TIGR02603"
                     /db_xref="CDD:274224"
ORIGIN      
        1 mrrsvcvsla vallgmilpi grslaqepaq alpevpegws ieliaeapai lyptaivtap
       61 dgtvylgqdp mdmpgpptep idsvvairpd gsistfadgl wavmglewid dtlyvvhapf
      121 lsafkdtngd gkadervdlv tglgpdrpgf sglndhvpgg melgmdgfly vavgdkgipk
      181 avgsdgstiq lkgggvvrvr pdgsdlevvs tgernplsam ltthdeifty gndddskkwp
      241 nslthhivgg hygypyefll rperalpivg gqlggsgtqg ivvkggglpe eiqgnllvcd
      301 wglqsvfrie vvpsggtfrl trrepfitag pvsdfrpfsi reaadgrsly vvdwgignwl
      361 lpdaetgrly rvtpaepsae tvaapetldl daldhpnhav rlraqrtlas qgaeavasla
      421 nrlgiegqgt qgrlhaiwal daigspdaaa aiceamgaen pvvrsqaarr agirkdrdak
      481 pmlegllddp davvrreaai algklgdpsa gpalmarlge ddpfvswair rairelgawd
      541 veailtalrd perreaairl tdeayavpva ealgkaltev tdaparaaiv tnlseillkv
      601 pewdgawfgt nplagtipqk taawdrdgmr laamgliral ddpdatvrgr aivglrkvgp
      661 savpylrarl gresdgenlr alalilgdla dresvpmlar ivvdplapsp areaavdalg
      721 hlqgpealra lftvtfdpka padlvaralp klsrsgalpp ndlasfldhe dasvriaaig
      781 alaaveglpd hltdrvvgrl ddpdptatva avaavaalga rpavpklvam fdaqqidptl
      841 rstlvralsv mpepealpvf ldaigdrdpd lrrsaeaall virdrvrprl eeharsvdrt
      901 spaaaalerv lttfqpvvdw qvigpfartt arvflgstei dfsethsgve grtiawhprq
      961 gdaqtgrvvi ddlkggqgdv ggfgydatgs pdlaafatae irsdeereal llfgssgsmi
     1021 velngepile vseyagrpye pdsdrvrvrl kkgsnrlvmr vrqgigtwaf gvqvsdpgqa
     1081 llaqseagsg vealrafame hdgdaergea lffagdgigc vkchaaggkg dsdlgpdltg
     1141 laakydraev irsilepsnr iatgyqpvlv atddgrvlag lvreesasel vladaeaqiv
     1201 rvvkdqieer rlgqvsimpe glvdslspqe fadlvaylms lkaptparve
//
LOCUS       WP_235905606             698 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Tautonia marina].
ACCESSION   WP_235905606
VERSION     WP_235905606.1
KEYWORDS    RefSeq.
SOURCE      Tautonia marina
  ORGANISM  Tautonia marina
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Isosphaerales; Isosphaeraceae; Tautonia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13407.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Tautonia marina"
                     /db_xref="taxon:2653855"
     Protein         1..698
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=73702
     Region          3..326
                     /region_name="AraH"
                     /note="Ribose/xylose/arabinose/galactoside ABC-type
                     transport system, permease component [Carbohydrate
                     transport and metabolism]; COG1172"
                     /db_xref="CDD:440785"
     Region          401..694
                     /region_name="PBP1_LsrB_Quorum_Sensing"
                     /note="ligand-binding protein LsrB of ABC transporter
                     periplasmic binding protein; cd20003"
                     /db_xref="CDD:380658"
     Site            order(407,413..414,488,502,537..538,541,591..593,616,
                     636..637)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:380658"
ORIGIN      
        1 mamttestig gvrlahpnsl epaqialivl lsveviifgl igtnfftvan gfevlrlsve
       61 igllavaltp vivsggidls vgslmglsav ifgklwrdag lpiplaaalt lvlaalagsl
      121 ngllitrlri pplivtlgtf slfrglaegm tggvdnftqf pesflflgqg yvfgriptqv
      181 piflavaigf wiflhrstvg rglvaigysp egarhagvrv drlvwsvyvl sgaasglaai
      241 iyvahlgqak adaglgyell aitavvlggt sifggrgsvl gtllglfaia vlqngmrlad
      301 qpgelsgvlt gvlllaaigl drrptrsppl ndqpgvdseg ewtvknsqva vicgviliag
      361 viiaasnvyv vrtltdrlmg ggdavsnads qatrsddqpi tvammpkskg nayfiacrqg
      421 aeeaakelgv nliwdgptdp dparqnqiid twitrgvdvi avavenrdgi asvlkkaqdr
      481 gikvitwdad aatdartffv nqatpegigr almdtaaeim ggsgkfaiit asltaanmis
      541 wqeqielrra eeypdiemav lrpcddlqqk aydeannimn aypdvelima ictpavpgaa
      601 eavkqsgrdd vkviglglpn dnrryvhegi teavilwnsm dlgyltvqaa kaleegtlkp
      661 gdeqfeagrl gtvnlrgdni llgepfiftt dnidnfdf
//
LOCUS       WP_235905707             720 aa            linear   BCT 02-MAR-2025
DEFINITION  right-handed parallel beta-helix repeat-containing protein
            [Actinomyces marmotae].
ACCESSION   WP_235905707
VERSION     WP_235905707.1
KEYWORDS    RefSeq.
SOURCE      Actinomyces marmotae
  ORGANISM  Actinomyces marmotae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Actinomycetales; Actinomycetaceae; Actinomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024627.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13229.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Actinomyces marmotae"
                     /db_xref="taxon:2737173"
     Protein         1..720
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /calculated_mol_wt=75197
     Region          20..405
                     /region_name="NosD"
                     /note="Nitrous oxide reductase accessory protein NosD,
                     contains tandem CASH domains [Inorganic ion transport and
                     metabolism]; COG3420"
                     /db_xref="CDD:442646"
ORIGIN      
        1 mlhvsassgs dsgdgsaakp yktlgaalka asegqvvela dgtyregniy vdkgvtiraa
       61 agatpvlsga evptswkagg dgtwstghdm vrfcdvcttn anpavegmaa hpeqvfvdgk
      121 pltqvasrge vnassfyvdd pdpvtlkkpg dsysgfnakp hrgtsyvigv dpskhtvevv
      181 qqhraltlqg anttlsgivv ekysplqrwd yqdpeigvft gggavvvske gqtienntfr
      241 ysaagsalhl asapntkvtg nrfednggaa lnvnassgtv ieknywrgtn sagfittdcg
      301 ayctiadtkv thsenvryaf ntvdnsasgk daslpqnnet vqtagiwfde gvinsdivgn
      361 hfinvplgil devsshttia sniidgagta irvqgsdnss vwnntvshal tslvvredtr
      421 skgcnarsad gtctslepws akrglswdtt navvtnnifs seqtqaspnd pwryasivnv
      481 dgdtnrhapg afyanqmiss idhnayyrph ggeynflhww qygknsinea fysqdlktfg
      541 shkgvttggk eshsldlrgt pdanplfvke asgpnwkasd frlkpgspas gagaalpkai
      601 aekigadagv avnmgalvna awngeqpaaq apgaeqpaep gaqaapttea papapagdaa
      661 qespakntpt aaaqaaqara eiakdvkpka rtvmaggala sllvgvlgpy lrrlflslra
//
LOCUS       WP_235905639             464 aa            linear   BCT 02-MAR-2025
DEFINITION  neutral/alkaline non-lysosomal ceramidase N-terminal
            domain-containing protein [Tautonia marina].
ACCESSION   WP_235905639
VERSION     WP_235905639.1
KEYWORDS    RefSeq.
SOURCE      Tautonia marina
  ORGANISM  Tautonia marina
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Isosphaerales; Isosphaeraceae; Tautonia.
REFERENCE   1  (residues 1 to 464)
  AUTHORS   Inoue,T., Okino,N., Kakuta,Y., Hijikata,A., Okano,H., Goda,H.M.,
            Tani,M., Sueyoshi,N., Kambayashi,K., Matsumura,H., Kai,Y. and
            Ito,M.
  TITLE     Mechanistic insights into the hydrolysis and synthesis of ceramide
            by neutral ceramidase
  JOURNAL   J Biol Chem 284 (14), 9566-9577 (2009)
   PUBMED   19088069
REFERENCE   2  (residues 1 to 464)
  AUTHORS   El Bawab,S., Roddy,P., Qian,T., Bielawska,A., Lemasters,J.J. and
            Hannun,Y.A.
  TITLE     Molecular cloning and characterization of a human mitochondrial
            ceramidase
  JOURNAL   J Biol Chem 275 (28), 21508-21513 (2000)
   PUBMED   10781606
REFERENCE   3  (residues 1 to 464)
  AUTHORS   Tani,M., Okino,N., Mori,K., Tanigawa,T., Izu,H. and Ito,M.
  TITLE     Molecular cloning of the full-length cDNA encoding mouse neutral
            ceramidase. A novel but highly conserved gene family of
            neutral/alkaline ceramidases
  JOURNAL   J Biol Chem 275 (15), 11229-11234 (2000)
   PUBMED   10753931
REFERENCE   4  (residues 1 to 464)
  AUTHORS   Okino,N., Ichinose,S., Omori,A., Imayama,S., Nakamura,T. and Ito,M.
  TITLE     Molecular cloning, sequencing, and expression of the gene encoding
            alkaline ceramidase from Pseudomonas aeruginosa. Cloning of a
            ceramidase homologue from Mycobacterium tuberculosis
  JOURNAL   J Biol Chem 274 (51), 36616-36622 (1999)
   PUBMED   10593963
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016612.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04734.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Tautonia marina"
                     /db_xref="taxon:2653855"
     Protein         1..464
                     /product="neutral/alkaline non-lysosomal ceramidase
                     N-terminal domain-containing protein"
                     /calculated_mol_wt=51496
     Region          38..>243
                     /region_name="Ceramidase_alk"
                     /note="Neutral/alkaline non-lysosomal ceramidase,
                     N-terminal; cl38166"
                     /db_xref="CDD:476609"
ORIGIN      
        1 mmrlasvcgg mgclvaamlv ypysviaeed agpdswnvgv arvvitpked vwlagygtkr
       61 vpdgklhdlw akaicledvd gnravlitsd fqgvpkgmsd rvfdrlnerf gierhqvmlt
      121 fshnhcgprl gedlvdyypv eeeqvarver yteemvgtlv nlvgdsiqsl apamlktgqg
      181 tatfavnrrn naeaevpami ergeplagpv dhsvpvltve rpdgalaavl fgyachpttl
      241 sfttwcgdyp gfaqlelerl ypgtaamfvn tcggdqnplp rrsvelcery gnelanavee
      301 tlqhplepia pilrtafemv dlpylevvtr dqlserltds nairsrwaar llakldageq
      361 fesaypypvh awrmgedtlm igmgaetvvd yalrfkreyg sktwvcgyvd dmiayipsrr
      421 vweeggyegg sflyeygrpa frwagdvedr iaatverlvs evre
//
LOCUS       WP_235905774             176 aa            linear   BCT 02-MAR-2025
DEFINITION  PAS domain-containing protein [Pseudooceanicola pacificus].
ACCESSION   WP_235905774
VERSION     WP_235905774.1
KEYWORDS    RefSeq.
SOURCE      Pseudooceanicola pacificus
  ORGANISM  Pseudooceanicola pacificus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Pseudooceanicola.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024818.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13426.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Pseudooceanicola pacificus"
                     /db_xref="taxon:2676438"
     Protein         1..176
                     /product="PAS domain-containing protein"
                     /calculated_mol_wt=19526
     Region          14..>123
                     /region_name="PRK13559"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:237427"
ORIGIN      
        1 maldvkleri rgvfersmva lsladleevd cplvlanarf etltgfsfre tegrncrflq
       61 gdldngrara dirqaienrt eaqvvlknrr ksgeafdnll flhpvsvggq tsrymlgsqf
      121 eltaaentle eamahagals gdlerigava erlrmqrrry ladasaalvt awarri
//
LOCUS       WP_235905882             123 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF2933 domain-containing protein [Paracoccaceae].
ACCESSION   WP_235905882
VERSION     WP_235905882.1
KEYWORDS    RefSeq.
SOURCE      Paracoccaceae
  ORGANISM  Paracoccaceae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023095.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11666.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Paracoccaceae"
                     /db_xref="taxon:31989"
     Protein         1..123
                     /product="DUF2933 domain-containing protein"
                     /calculated_mol_wt=12760
ORIGIN      
        1 mkqqflkdea tmihanrpgn pqgnklmryg mmaccavmli pvgaffvtgg svsglwanag
       61 ifaplilcag ghvvmhrmmg kschgdgeta pkliaepipv addrpgnesr tgspgvhats
      121 leg
//
LOCUS       WP_235905988             897 aa            linear   BCT 02-MAR-2025
DEFINITION  family 78 glycoside hydrolase catalytic domain [Ginsengibacter
            hankyongi].
ACCESSION   WP_235905988
VERSION     WP_235905988.1
KEYWORDS    RefSeq.
SOURCE      Ginsengibacter hankyongi
  ORGANISM  Ginsengibacter hankyongi
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Ginsengibacter.
REFERENCE   1  (residues 1 to 897)
  AUTHORS   Zverlov,V.V., Hertel,C., Bronnenmeier,K., Hroch,A., Kellermann,J.
            and Schwarz,W.H.
  TITLE     The thermostable alpha-L-rhamnosidase RamA of Clostridium
            stercorarium: biochemical characterization and primary structure of
            a bacterial alpha-L-rhamnoside hydrolase, a new type of inverting
            glycoside hydrolase
  JOURNAL   Mol Microbiol 35 (1), 173-179 (2000)
   PUBMED   10632887
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017410.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05592.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Ginsengibacter hankyongi"
                     /db_xref="taxon:2607284"
     Protein         1..897
                     /product="family 78 glycoside hydrolase catalytic domain"
                     /calculated_mol_wt=101507
     Region          162..331
                     /region_name="Bac_rhamnosid_N"
                     /note="Alpha-L-rhamnosidase N-terminal domain; pfam08531"
                     /db_xref="CDD:400715"
     Region          339..423
                     /region_name="Bac_rhamnosid"
                     /note="Bacterial alpha-L-rhamnosidase concanavalin-like
                     domain; pfam05592"
                     /db_xref="CDD:336149"
     Region          451..786
                     /region_name="Bac_rhamnosid6H"
                     /note="Bacterial alpha-L-rhamnosidase 6 hairpin
                     glycosidase domain; cl46875"
                     /db_xref="CDD:481215"
     Region          797..865
                     /region_name="Bac_rhamnosid_C"
                     /note="Bacterial alpha-L-rhamnosidase C-terminal domain;
                     pfam17390"
                     /db_xref="CDD:379972"
ORIGIN      
        1 merllcdyqe npigidnkrp slswqlqssq rfvqqtayri liaddssllq knegniwdtk
       61 kllsrqslyi rfagqkllpv knyywkvmvw dnrgnvssws hmakwqmgll stgdwkdakw
      121 igynklpdsl rlvpaidnag dkrwtegadt lpllrkefti nkqikkatvf itglgqfemc
      181 lngkkvgdhf ldpgwtkfdq qvlyvtfdvt sklrqgvnai gvmlgngfyy mpgeryhklk
      241 gaygypkiic rliiafadgs eqniisdqsw kacpgpvtfs siyggedyna tleqkgwnep
      301 gfndnswrqa iivnspenle aqsayplkim defrvqkite pkpgtwvydm gqnasaipli
      361 kvegkrgdvv kiipaelldd sglvmqtpvg tpvyfkytlk gdgvetwhpq fmyygfryiq
      421 leggvpenkt nknevpvire ltslhtrnsa ptigrftcsn elfnrifkli gwaiksntas
      481 iftdcphrek lgwleeahlv gssirynydi atlcrkvvrd mmhsqtvdgl ipdiapeyvt
      541 faggfrdspe wgssgiilpy ylyqwygdkq ileesysmmk ryaaylekks kshllyfglg
      601 dwydigpnnl gpsqltpegm tstayyyydl tilskvavll hknedakfye alseqvkkay
      661 ndtffnkqtk qygagsqtan aislymglan vadkkkiidn iiedirkhnn gvtsgdigfr
      721 yllqvldeag rsdvifdmns radvpgygyq laqgatslte swqgnrissn nhfmlghlme
      781 wfysglggik qakntkafsh iiirpevvgd itfskvsfls pfgmitnnwe kkkglftmnt
      841 kipvnttaii ylpatigksi tengkpilnr ndikflgfee gkallkvgsg sylfivk
//
LOCUS       WP_235906022             655 aa            linear   BCT 02-MAR-2025
DEFINITION  OmpA family protein [Ginsengibacter hankyongi].
ACCESSION   WP_235906022
VERSION     WP_235906022.1
KEYWORDS    RefSeq.
SOURCE      Ginsengibacter hankyongi
  ORGANISM  Ginsengibacter hankyongi
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Ginsengibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012894.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00691.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Ginsengibacter hankyongi"
                     /db_xref="taxon:2607284"
     Protein         1..655
                     /product="OmpA family protein"
                     /calculated_mol_wt=73098
     Region          45..>170
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          46..74
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(47,50..51,54..55,57,81,84..85,88..89,91..92,115,
                     118..119,123..124,127)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          79..109
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          114..142
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          189..335
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
     Region          270..452
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
     Region          398..653
                     /region_name="OmpA"
                     /note="Outer membrane protein OmpA and related
                     peptidoglycan-associated (lipo)proteins [Cell
                     wall/membrane/envelope biogenesis]; COG2885"
                     /db_xref="CDD:442131"
     Region          548..651
                     /region_name="OmpA_C-like"
                     /note="Peptidoglycan binding domains similar to the
                     C-terminal domain of outer-membrane protein OmpA; cd07185"
                     /db_xref="CDD:143586"
     Site            order(553..554,587..588,591,595..596,599,641,645)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:143586"
ORIGIN      
        1 minkfsitsc fkqstsyiii isfillftsc vvsaqwydpe kvdhnantiy slalnkaqnd
       61 dyptaikmin eaikiepkfv daylslagin anmknytesv nqfekafsld svytynyllp
      121 ysislagtgr fndalnavnk flldttindr srkagefrkg tyqfaidyan thpgknyvfn
      181 pknlgdsint tnleyfpslt idgkklifte ringnedfye sdlndkgvwg kayplpgnin
      241 sttfnegaqn isqdgkwlif tgcnfpeglg scdlyisylt ktgwsepqnl gpnvnsefwe
      301 stpslspdkr dlyfssnvpg gfggkdiwvc hrdengkwge plnlgpdint agdestpfih
      361 adnqtlyfns nghecysekp difvtrklpn gkwskpenlg ypvntiddeg slvvasdgkt
      421 ayyssdrsdt kggldiytfq lrqdirplkt lwvkgqvydk ktkqglpssv eltdintrql
      481 isklqtdedg nylvtlpvgk dyafnvqrkg ylfysenyni sstapdstfl adiplqpiea
      541 nasiilknvf fdtkrtelkp esiteldnvv rlmnenpkik ivisgytdnv gkpsdnlsls
      601 kgravavvny llgkgvnsar lsfrglgetn pvadnkteeg ralnrrtels ivsve
//
LOCUS       WP_235906051             157 aa            linear   BCT 02-MAR-2025
DEFINITION  ion channel [Patiriisocius marinistellae].
ACCESSION   WP_235906051
VERSION     WP_235906051.1
KEYWORDS    RefSeq.
SOURCE      Patiriisocius marinistellae
  ORGANISM  Patiriisocius marinistellae
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Patiriisocius.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Choe,S.
  TITLE     Potassium channel structures
  JOURNAL   Nat Rev Neurosci 3 (2), 115-121 (2002)
   PUBMED   11836519
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019500.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07885.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Patiriisocius marinistellae"
                     /db_xref="taxon:2494560"
     Protein         1..157
                     /product="ion channel"
                     /calculated_mol_wt=17241
     Region          <57..>127
                     /region_name="PRK10537"
                     /note="voltage-gated potassium channel protein"
                     /db_xref="CDD:236711"
ORIGIN      
        1 mllssiqafs tsifngsfag ylifllsvlk vsaivwlsft qltkiigqsh lishiltlfi
       61 fliativcsf sldylslyvs dgnsfktslv nndvsmvgml yeyfyfstit fssvgygdiv
      121 pqsilakgiv miqvavrffv lvfgianinq ikvdnnt
//
LOCUS       WP_235906068             442 aa            linear   BCT 02-MAR-2025
DEFINITION  CsgG/HfaB family protein [Patiriisocius marinistellae].
ACCESSION   WP_235906068
VERSION     WP_235906068.1
KEYWORDS    RefSeq.
SOURCE      Patiriisocius marinistellae
  ORGANISM  Patiriisocius marinistellae
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Patiriisocius.
REFERENCE   1  (residues 1 to 442)
  AUTHORS   Loferer,H., Hammar,M. and Normark,S.
  TITLE     Availability of the fibre subunit CsgA and the nucleator protein
            CsgB during assembly of fibronectin-binding curli is limited by the
            intracellular concentration of the novel lipoprotein CsgG
  JOURNAL   Mol Microbiol 26 (1), 11-23 (1997)
   PUBMED   9383186
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03783.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Patiriisocius marinistellae"
                     /db_xref="taxon:2494560"
     Protein         1..442
                     /product="CsgG/HfaB family protein"
                     /GO_component="GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA]"
                     /calculated_mol_wt=49724
     Region          9..242
                     /region_name="CsgG"
                     /note="Curli biogenesis system outer membrane secretion
                     channel CsgG [Cell wall/membrane/envelope biogenesis];
                     COG1462"
                     /db_xref="CDD:441071"
     Region          288..439
                     /region_name="OMP_b-brl"
                     /note="Outer membrane protein beta-barrel domain;
                     pfam13505"
                     /db_xref="CDD:463903"
ORIGIN      
        1 mscgsyfnqp tkfqdarige ttkntesirs lptpekkvvi gvynfkdqtg qykqtqagsn
       61 fstavtqgat tvlikaleds kwfrpieren lsnllqerki ieatrndyas dktqvqrlsp
      121 llfagvileg giisydsnil tggagaryfg iggstqyrqd ritiylrava tstgevvktv
      181 yvsktilsqg vdaglfryvn fqrllevetg ytknepaela vkeaiekave slvyegiidg
      241 lwvaeggeek reeikteylk nkeeeeaigl ynrkfyendr khsihaaiga alidgdlath
      301 dpdfavelgy kydltnsfrv naaaglfkly sspeinywfm dfdlnfeyri lsndkfspyi
      361 yggpglllfv ddepfkflqk gdsfgkiqyg igleyhssda fsfflkgdyn ysfsdkidnv
      421 ingskddhyy nvhfgvnynl gf
//
LOCUS       WP_235906140             748 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Patiriisocius marinistellae].
ACCESSION   WP_235906140
VERSION     WP_235906140.1
KEYWORDS    RefSeq.
SOURCE      Patiriisocius marinistellae
  ORGANISM  Patiriisocius marinistellae
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Patiriisocius.
REFERENCE   1  (residues 1 to 748)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Patiriisocius marinistellae"
                     /db_xref="taxon:2494560"
     Protein         1..748
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=84953
     Region          <357..727
                     /region_name="PRK11107"
                     /note="hybrid sensory histidine kinase BarA; Provisional"
                     /db_xref="CDD:236848"
ORIGIN      
        1 mnkpshskky iisimmclti fmcygqaitk dsislvkqyk tnaneaifrf dfeeavknin
       61 lannlvvnin dddlkadvmv tntmlqyylq nyntaqiine kaikiilasn nikklpniyv
      121 lnglintrle kftvaednfd kadsifeiin dekekspili grgllefkkg nskaavnyyn
      181 agisdykngn nkyfeafsyv nkaealikiy nedndiqhln qaksiineas viidslnykk
      241 lkiesykvks eiaiiekkfn dallffnkyt tkndslnlvf insisatnnn elnvgalhkr
      301 ienyeenlve ieksekfnqv tngmsiaiia ilslltlsly knnnlrakan nllqdkntel
      361 qlakekaeka slakaqflst ithelrtply avtglthllm eespkehqke hlnslkfsge
      421 yllslinnil dlnkleankv evektsfnlk krindvlval kksaddkktk lvfdfndsip
      481 eiflgdpvkl sqilinlign svkftqngvv nvrvkkidqr grivklkfei edngvgiskk
      541 kqksifetfs qgslqinrkf ggtglglsiv knllelmnsk ielesqlgkg skfwfnldie
      601 aledneiean neitklkied sffkdknvlv vednkinqmi tkkileknhm icqvadngmt
      661 aielvknnnf divlmdihmp gisgieatqk irlfdeqlpi ialtavtide nldtffkagf
      721 neiipkpfkp eeffekihss lknrqlqn
//
LOCUS       WP_235906242             216 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3667 domain-containing protein [Ginsengibacter hankyongi].
ACCESSION   WP_235906242
VERSION     WP_235906242.1
KEYWORDS    RefSeq.
SOURCE      Ginsengibacter hankyongi
  ORGANISM  Ginsengibacter hankyongi
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Ginsengibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12412.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Ginsengibacter hankyongi"
                     /db_xref="taxon:2607284"
     Protein         1..216
                     /product="DUF3667 domain-containing protein"
                     /calculated_mol_wt=25022
     Region          12..55
                     /region_name="DUF3667"
                     /note="Protein of unknown function (DUF3667); pfam12412"
                     /db_xref="CDD:432535"
ORIGIN      
        1 madvlhvfth lekgflfttw sflikpgiss inyisgkrkq fqtpvsyfli wtglyivlhd
       61 kivnhfnyll sgevitqldk sgeanrllqk hftlfiipav facalsiyyv larpkynfte
      121 llvlslyggg tyfmmlflsd ivlgiickvn vlnapvflwq talsflynfw fsfdifkrar
      181 lrlfwlrlic aailvaitgw iilfylpiaw lyltkq
//
LOCUS       WP_235906260             391 aa            linear   BCT 02-MAR-2025
DEFINITION  enolase C-terminal domain-like protein [Ginsengibacter hankyongi].
ACCESSION   WP_235906260
VERSION     WP_235906260.1
KEYWORDS    RefSeq.
SOURCE      Ginsengibacter hankyongi
  ORGANISM  Ginsengibacter hankyongi
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Ginsengibacter.
REFERENCE   1  (residues 1 to 391)
  AUTHORS   Thoden,J.B., Taylor Ringia,E.A., Garrett,J.B., Gerlt,J.A.,
            Holden,H.M. and Rayment,I.
  TITLE     Evolution of enzymatic activity in the enolase superfamily:
            structural studies of the promiscuous o-succinylbenzoate synthase
            from Amycolatopsis
  JOURNAL   Biochemistry 43 (19), 5716-5727 (2004)
   PUBMED   15134446
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024771.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13378.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Ginsengibacter hankyongi"
                     /db_xref="taxon:2607284"
     Protein         1..391
                     /product="enolase C-terminal domain-like protein"
                     /calculated_mol_wt=43218
     Region          6..367
                     /region_name="enolase_like"
                     /note="Enolase-superfamily, characterized by the presence
                     of an enolate anion intermediate which is generated by
                     abstraction of the alpha-proton of the carboxylate
                     substrate by an active site residue and is stabilized by
                     coordination to the essential Mg2+ ion; cl40480"
                     /db_xref="CDD:477366"
     Site            order(191,217,240)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:238188"
     Site            order(264,318)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:238188"
ORIGIN      
        1 mktrcvaipl naqlrhntgv hpgyflrtil elvtdegiig lgevgggdqr galqklkpri
       61 igmdpfslel iklkvlrsiy yisnsrlyaa iemacldiqg kttmrplsdl iggsvrsaip
      121 migylfwryd rpgggndtca edladycvel hetlgincmk lkagvqkpee eakvlrlcra
      181 klgddfglri dpnglwsvat avrigrsled lnieyfedpa wgiegnaavr kqvripvatn
      241 mypnkfddlg pairlgavdi vltdlhyweg prgvkdlcav cntfnlgvam hsgsefgiel
      301 aamlhtasti pgmtfagdah yhyllddiie gglmkyengc ikvpagpglg vnldeskmkf
      361 yekyyeekgd yyarfhqdpy rpdwyptvgg l
//
LOCUS       WP_235906291             430 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Porcincola intestinalis].
ACCESSION   WP_235906291
VERSION     WP_235906291.1
KEYWORDS    RefSeq.
SOURCE      Porcincola intestinalis
  ORGANISM  Porcincola intestinalis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Porcincola.
REFERENCE   1  (residues 1 to 430)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 430)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012234.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00004.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Porcincola intestinalis"
                     /db_xref="taxon:2606632"
     Protein         1..430
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=47791
     Region          174..427
                     /region_name="spore_V_K"
                     /note="stage V sporulation protein K; TIGR02881"
                     /db_xref="CDD:163057"
ORIGIN      
        1 maskcnvndw deiqcisaym etgdqlvvkg vyqdsfgfpv egsicldvrk rtvhmeadqg
       61 dralsadyql ghpmhirttp klskielngk qtliipddds ynrfvkllry iamagkvgdd
      121 pengvsdtgg kerstmaagg gtdgqtgasp esrtdrekqv ralariedsa syeqlqklvg
      181 lesvkkdvvq lanlmkmqvr rkeqelpevp fslhlvfsgn pgtgkttiar ilagiykdig
      241 vlskgqlvec drgdlvagyv gqtairtkek ieaakggilf ideaytlarg endfgqeaid
      301 tilkamedlr edfvvivagy telmkefigs npglksrfnk yiefpdytad elvkifytmt
      361 ekynyrltdk akekaeekir kmeaekgphf anardvrnlf ekivtnqatr laelpdadir
      421 eiteadiclv
//
LOCUS       WP_235906253             716 aa            linear   BCT 02-MAR-2025
DEFINITION  family 1 glycosylhydrolase [Ginsengibacter hankyongi].
ACCESSION   WP_235906253
VERSION     WP_235906253.1
KEYWORDS    RefSeq.
SOURCE      Ginsengibacter hankyongi
  ORGANISM  Ginsengibacter hankyongi
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Ginsengibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012457.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00232.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Ginsengibacter hankyongi"
                     /db_xref="taxon:2607284"
     Protein         1..716
                     /product="family 1 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=81467
     Region          38..>325
                     /region_name="BglB"
                     /note="Beta-glucosidase/6-phospho-beta-glucosidase/beta-
                     galactosidase [Carbohydrate transport and metabolism];
                     COG2723"
                     /db_xref="CDD:442035"
     Region          441..713
                     /region_name="RfbD"
                     /note="dTDP-4-dehydrorhamnose reductase [Cell
                     wall/membrane/envelope biogenesis]; COG1091"
                     /db_xref="CDD:440708"
ORIGIN      
        1 memelknqli kpeiwggiec tinrvenkyr dqleyaghyt rgadikniaa lgikalrypv
       61 lwerhhstga vkdkwnwvrn qletirghni tpiaglvhhg sgprftalnd nnfaehlaky
      121 agevanqfpw ieyytpinep lttarfsgly glwyphhsda vsfanmllnq lkgvvlsmka
      181 irkinpnakl vqtedlakth stpllkyqal fenerhwltf dilcgkvnpn hffwnhfisl
      241 gikketlyff ldnpcppdim gfnyyvtser yldekihlhp vnshggngqh syadlaavrf
      301 vqtaglknll teawdryhlp ialtevhlnc treeqlrwfk eawdtccnlk asgidikavt
      361 awsmlgafdw nslltrdekk yesgvfdvsn nvlrptalak litslntngt fdhplinekg
      421 wwrttpvnnn hlneksiaqs lliigkngtl gratqeickq rnipfiaigr neldirskeq
      481 ieqvihlykp waiinaagyv rvdeaesdie ecfsinatgp yllaeccnkk gikfmtfssd
      541 lvfdgnkisp yleedsiqpl niygkskara eslimnsnps sliirtsaff gpwdkynfpm
      601 qvisslkenr pckvaddiiv sptyvpdlvn taldlfidde egiwhlsneg niswsqfaye
      661 vadragvskd nlvacsnddm ewkarrplys alqssrgval pkfenalqrf fddkiv
//
LOCUS       WP_235906295             129 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6040 family protein [Porcincola intestinalis].
ACCESSION   WP_235906295
VERSION     WP_235906295.1
KEYWORDS    RefSeq.
SOURCE      Porcincola intestinalis
  ORGANISM  Porcincola intestinalis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Porcincola.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040306.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19506.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Porcincola intestinalis"
                     /db_xref="taxon:2606632"
     Protein         1..129
                     /product="DUF6040 family protein"
                     /calculated_mol_wt=14321
     Region          <17..>120
                     /region_name="DUF6040"
                     /note="Family of unknown function (DUF6040); pfam19506"
                     /db_xref="CDD:437338"
ORIGIN      
        1 mqwhllgfry rslsintttl ftailspvfl ndcitffgti gkgmvslfqe fvtgadsfgq
       61 lsdgisnsvi sgivywliaa ivmgilfiit gliivwigyq vgkiywkycw diisimvafi
      121 qstpddtde
//
LOCUS       WP_235906328             177 aa            linear   BCT 02-MAR-2025
DEFINITION  cyclophilin-like fold protein [Porcincola intestinalis].
ACCESSION   WP_235906328
VERSION     WP_235906328.1
KEYWORDS    RefSeq.
SOURCE      Porcincola intestinalis
  ORGANISM  Porcincola intestinalis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Porcincola.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037716.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18050.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Porcincola intestinalis"
                     /db_xref="taxon:2606632"
     Protein         1..177
                     /product="cyclophilin-like fold protein"
                     /calculated_mol_wt=19630
     Region          <1..>64
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          56..173
                     /region_name="COG4925"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:443953"
ORIGIN      
        1 mtvgqkkqlp vkktwkkvsw ksskpqiaav skkgkvtakk agkavitaks gkkkqkflit
       61 vkknriklvi ggktfqadme nnrtarafir llpatlrmee lngnekycyl dqtlpvnakk
      121 pgtiragdlm lygddcvvlf yktfqssysy tkighisnir gledllgngn ikvllkp
//
LOCUS       WP_235906132             927 aa            linear   BCT 02-MAR-2025
DEFINITION  Npt1/Npt2 family nucleotide transporter [Patiriisocius
            marinistellae].
ACCESSION   WP_235906132
VERSION     WP_235906132.1
KEYWORDS    RefSeq.
SOURCE      Patiriisocius marinistellae
  ORGANISM  Patiriisocius marinistellae
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Patiriisocius.
REFERENCE   1  (residues 1 to 927)
  AUTHORS   Tjaden,J., Winkler,H.H., Schwoppe,C., Van Der Laan,M., Mohlmann,T.
            and Neuhaus,H.E.
  TITLE     Two nucleotide transport proteins in Chlamydia trachomatis, one for
            net nucleoside triphosphate uptake and the other for transport of
            energy
  JOURNAL   J Bacteriol 181 (4), 1196-1202 (1999)
   PUBMED   9973346
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015194.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03219.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Patiriisocius marinistellae"
                     /db_xref="taxon:2494560"
     Protein         1..927
                     /product="Npt1/Npt2 family nucleotide transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005471 - ATP:ADP antiporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0006862 - nucleotide transport [Evidence
                     IEA]"
                     /calculated_mol_wt=105260
     Region          1..402
                     /region_name="TlcC"
                     /note="ATP/ADP translocase [Energy production and
                     conversion]; COG3202"
                     /db_xref="CDD:442435"
     Region          609..>711
                     /region_name="HEAT"
                     /note="HEAT repeat [General function prediction only];
                     COG1413"
                     /db_xref="CDD:441023"
ORIGIN      
        1 mqlyifllit vllmvkptin alflsklgad hlpyayllva liavvtsyfy nravkkyslk
       61 kittstllff sasfmllsfl myyslsndfi lysyylsvsl favlvtsqfw iianmvfnar
      121 eakrlfgfig agaiaggifg gyitsiiapl fgnrvvilia allilfcipi lntawkmrir
      181 klstyiinqr ktketeftpa ykliirskhl tylaaivgvg vvmaklvdfq fsdfanraip
      241 dsdelasffg fwfssfnvia lliqlfltnr llawlgvtsn llilplgial gcllfltfpe
      301 lwvlviikgm dgsfkqsink agielsilpi pshvkneaks fidvvvdsia tgfaglllif
      361 vikrlelsts yitviillvl fvwmvlvykl reayfesfrt nihrsldtne lqqhkfqkss
      421 isenikilkn gnesqilall erlrdvkfsa fephiinlld hpthkikvaa ierlydfrkg
      481 taaekikkli kekddelvfk aieylithtn iddiklyety lessstyian aallclakaa
      541 sendklatkf klheriekki stfieagdvi rkqevaelmm tvayakelkf ysfisanfnn
      601 ksnyivkhai kaagvtnhap fiepliafla ikkynlrakk alknygetis ktilemdtsq
      661 ylnddvrrhi pgviesfknr naikvlmrll kskdfvirle aakslnkiks kfpqasldqr
      721 sltkiilres tyyknsintl aslkaaaska aaietettdd lqvdllvare slidvlelql
      781 eqslecvfkl lslkydhsdi qtayfglkse ekevkinaie fldnllkskl kstmlpmiey
      841 hiidsdtyhi ssfevkpmle tralplllkn rgskmklavl nvmmhtsemr yiklimpllk
      901 hrnkkvrlfa kyaldgiran kkaltlq
//
LOCUS       WP_235906458             265 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5986 family protein [Porcincola intestinalis].
ACCESSION   WP_235906458
VERSION     WP_235906458.1
KEYWORDS    RefSeq.
SOURCE      Porcincola intestinalis
  ORGANISM  Porcincola intestinalis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Porcincola.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040292.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19448.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Porcincola intestinalis"
                     /db_xref="taxon:2606632"
     Protein         1..265
                     /product="DUF5986 family protein"
                     /calculated_mol_wt=29622
     Region          10..257
                     /region_name="DUF5986"
                     /note="Family of unknown function (DUF5986); pfam19448"
                     /db_xref="CDD:437280"
ORIGIN      
        1 mdefdvidiq pelrlivnal akaigldtrs yltgsnmdtn naiillrgdf intnlrdmvv
       61 aindnlelkh fkrfvwtgsl lidrkhniti tisarptlnr ikgvkgrknp hylqsmchvl
      121 ngdlkaeckq mtladmegvd fdppfadevy gadfdsiida aaisqdegyr hcviayeter
      181 leikslslli ldadldvvkd islmdllqpd fstltaevaa veeapqkrda hslvkvrkdi
      241 ksknsnepdk kpeistkree vgkqa
//
LOCUS       WP_235906465             173 aa            linear   BCT 02-MAR-2025
DEFINITION  cyclophilin-like fold protein [Porcincola intestinalis].
ACCESSION   WP_235906465
VERSION     WP_235906465.1
KEYWORDS    RefSeq.
SOURCE      Porcincola intestinalis
  ORGANISM  Porcincola intestinalis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Porcincola.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037716.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18050.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Porcincola intestinalis"
                     /db_xref="taxon:2606632"
     Protein         1..173
                     /product="cyclophilin-like fold protein"
                     /calculated_mol_wt=18959
     Region          3..>47
                     /region_name="OM_YfiO"
                     /note="outer membrane assembly lipoprotein YfiO;
                     TIGR03302"
                     /db_xref="CDD:274513"
     Region          48..170
                     /region_name="Cyclophil_like2"
                     /note="Cyclophilin-like family; cl41962"
                     /db_xref="CDD:477883"
ORIGIN      
        1 mnrfvlagml slillisgcg fnmdteetik etdppsesna gdemennmde smpeesaair
       61 mtienipvri twednesvta lrelarkepi qihmsmyggf eqvgpigtsl prddaettts
      121 agdivlysgn qlvvfygsns waytrlgrit dktkedlsel lgngdvtiti qtd
//
LOCUS       WP_235906466              73 aa            linear   BCT 02-MAR-2025
DEFINITION  Fic family protein [Porcincola intestinalis].
ACCESSION   WP_235906466
VERSION     WP_235906466.1
KEYWORDS    RefSeq.
SOURCE      Porcincola intestinalis
  ORGANISM  Porcincola intestinalis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Porcincola.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF045016.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21247.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Porcincola intestinalis"
                     /db_xref="taxon:2606632"
     Protein         1..73
                     /product="Fic family protein"
                     /calculated_mol_wt=8282
ORIGIN      
        1 meemssmney kppfhmtdkt tnlvgdiseq vgrikvlshg nlnpalaqgv iemtipdkpn
       61 srnqryrrkq ldr
//
LOCUS       WP_235906475             712 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxy terminal-processing peptidase [Ginsengibacter hankyongi].
ACCESSION   WP_235906475
VERSION     WP_235906475.1
KEYWORDS    RefSeq.
SOURCE      Ginsengibacter hankyongi
  ORGANISM  Ginsengibacter hankyongi
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Ginsengibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023246.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11818.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Ginsengibacter hankyongi"
                     /db_xref="taxon:2607284"
     Protein         1..712
                     /product="carboxy terminal-processing peptidase"
                     /EC_number="3.4.21.102"
                     /calculated_mol_wt=79688
     Region          53..626
                     /region_name="PRK11186"
                     /note="carboxy terminal-processing peptidase"
                     /db_xref="CDD:236873"
     Region          562..703
                     /region_name="DUF3340"
                     /note="C-terminal domain of tail specific protease
                     (DUF3340); pfam11818"
                     /db_xref="CDD:432098"
ORIGIN      
        1 mskkflpvll vlicgglfvt ygvmgrgdrl sdnpktkyek ilknvgivle eghyspktid
       61 dafskevlnk yedgldpdkf ifyqkdiddf kkyenkidde ihgaplesfy aisktylarl
      121 nevsknykei lskpfdfskd eslqldgekr tfpkteaery dysrkrlkyl vlgrfvdlqd
      181 eraklnkdsl hkadstlere areivsrqmd ryfltlknhn tpddmfsdfv naitgsmdph
      241 ttyfepvdkr sfdellsgtf fgigaqlked dgkikigsli tggpawksgd iqpedeiikv
      301 aqgnatpvdv tgyavtdavk lirgeqkgse vrltlkkadg sikvvpilrd kislddtfak
      361 saivndgtnk igyiylpefy adfddpsarr satdvakevq klkdakvdgi vidlrgnggg
      421 slndvvdmvg lfikdgpvvq vkgrdekasv lndrdkdvly sgplavmvde msasaseifa
      481 aaiqdyhrgv iigststygk gtvqrsisld pqsenplfsk pseglgdlkl tfrkfyring
      541 gatqlrgvvp diiipdrlen vkfrekdnpd alswdeipka tyttwnpgys ynsivseant
      601 dlqkspvfkg iredvdqldk yndaetplni qkyraqieqi ktlskkldsl tklssefpvh
      661 niasdsltlg ndsdkiaknk qflkhigddi yinqtvkvve kmigeeqlaq tk
//
LOCUS       WP_235906599             698 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail length tape measure family protein [Brucella anthropi].
ACCESSION   WP_235906599
VERSION     WP_235906599.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 698)
  AUTHORS   Pedersen,M., Ostergaard,S., Bresciani,J. and Vogensen,F.K.
  TITLE     Mutational analysis of two structural genes of the temperate
            lactococcal bacteriophage TP901-1 involved in tail length
            determination and baseplate assembly
  JOURNAL   Virology 276 (2), 315-328 (2000)
   PUBMED   11040123
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06791.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..698
                     /product="phage tail length tape measure family protein"
                     /calculated_mol_wt=74457
     Region          66..>154
                     /region_name="TMP_2"
                     /note="Prophage tail length tape measure protein;
                     pfam06791"
                     /db_xref="CDD:429120"
     Region          <216..>540
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
ORIGIN      
        1 mavtadkvvv eleadvnayl tktaqaqqqg varmqaigds atamgnasta gfnkaasaae
       61 sssaslkkag vsagmaqqqv rnlafqfqdi gtmlasgqsp vtllaqqlpq itmyggslng
      121 vmgalkstva glisplglat tafvllgsaa isyfdelfts gtkseeqlkk eaqliqdvvd
      181 kwgealpalk aynderrkve enkkvedata vavadqwekl reqvggftve yadlmaqlqg
      241 agapveeler fretffnlkg nieagtatqk dyqavteals tllnstsipa idsfasaisa
      301 ligplneaar ataelnaqan mqtgkapfed yaanlikgfd elskktdeft anaakrnams
      361 kdqldvenei arvrseadka gavltekqlr dlaqqnvead krrsaeetar rksereanrk
      421 prkpresdle rtsrsfsdrt attvaeteal rqldatvedy gytlakarae qalmnaaqkd
      481 gkaitpemre nigqiadeya rataeanqla eaqdkirqrs eewqdlakda trgivddlia
      541 gksaadafsn algriaqkll dmafddlftg lfkggggggf lgglipgfat gtnyapggla
      601 lvgergpelv nlprgaqvip nhkltaptlp siqgarqsas sgamrvdvgv svdndgnlqa
      661 yvqnvsrkts qsairsydkt gparlkrdsr qanmrgmv
//
LOCUS       WP_235906659             138 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2345 domain-containing protein, partial [Yersinia
            rochesterensis].
ACCESSION   WP_235906659
VERSION     WP_235906659.1
KEYWORDS    RefSeq.
SOURCE      Yersinia rochesterensis
  ORGANISM  Yersinia rochesterensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021611.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10106.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Yersinia rochesterensis"
                     /db_xref="taxon:1604335"
     Protein         <1..138
                     /product="DUF2345 domain-containing protein"
     Region          <1..116
                     /region_name="COG4253"
                     /note="Uncharacterized conserved protein, DUF2345 family
                     [Function unknown]"
                     /db_xref="CDD:443395"
ORIGIN      
        1 gnmtvltgek lglfarsgql slkssegpie iqaqngnarl faeqkltlts addmllagkk
       61 ritlngggsy lkieagkiey gttsqylrkv krtattaant lplntpllpg qypplqgkvc
      121 iecllnaika ndamvqga
//
LOCUS       WP_235906708             494 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase HerA-like domain-containing protein [Pseudomonas
            saliphila].
ACCESSION   WP_235906708
VERSION     WP_235906708.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas saliphila
  ORGANISM  Pseudomonas saliphila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 494)
  AUTHORS   Huang,Q., Liu,L., Liu,J., Ni,J., She,Q. and Shen,Y.
  TITLE     Efficient 5'-3' DNA end resection by HerA and NurA is essential for
            cell viability in the crenarchaeon Sulfolobus islandicus
  JOURNAL   BMC Mol Biol 16, 2 (2015)
   PUBMED   25880130
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 494)
  AUTHORS   Rzechorzek,N.J., Blackwood,J.K., Bray,S.M., Maman,J.D.,
            Pellegrini,L. and Robinson,N.P.
  TITLE     Structure of the hexameric HerA ATPase reveals a mechanism of
            translocation-coupled DNA-end processing in archaea
  JOURNAL   Nat Commun 5, 5506 (2014)
   PUBMED   25420454
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 494)
  AUTHORS   Constantinesco,F., Forterre,P., Koonin,E.V., Aravind,L. and Elie,C.
  TITLE     A bipolar DNA helicase gene, herA, clusters with rad50, mre11 and
            nurA genes in thermophilic archaea
  JOURNAL   Nucleic Acids Res 32 (4), 1439-1447 (2004)
   PUBMED   14990749
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017669.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05872.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Pseudomonas saliphila"
                     /db_xref="taxon:2586906"
     Protein         1..494
                     /product="helicase HerA-like domain-containing protein"
                     /calculated_mol_wt=53940
     Region          8..494
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 midtnlppll lgansqqrva ieprmanrhg liagatgtgk titlqvlaqa fsdmgvpvlv
       61 pdikgdfsgi akhgvmsdgl qkratrvgld dlqmsgaptv fwdvygehgh plrltmadfg
      121 pimlarllnl netqtgvlqv lfkvadengw llldlkdfra mlayinenrs eigpkygnvs
      181 pasigaiqra llsldnlggd qlfgepavtl ddfmqtdlhg kgvvnilhaa rlyrdspmay
      241 ssillwllse lfeqlpevgd adkprfvlff deahllfkdt pkslvdrieq vvrlirskgv
      301 gvyfitqspl dvpesilgql gnrvqhalra ftpkdqravr taaqtfrsnp eldteavite
      361 lgvgealvsv ldakgvptpv qrvlirppas qmgpisdqer svllqrsvla gvfdklldre
      421 sayeilqeqa eralseetvv trsqteakqp rkpaaeksvv gdffkqagrs amrsigtqlg
      481 rqimrgllgs lkgr
//
LOCUS       WP_235906760             134 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar basal body-associated FliL family protein [Pseudomonas
            saliphila].
ACCESSION   WP_235906760
VERSION     WP_235906760.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas saliphila
  ORGANISM  Pseudomonas saliphila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 134)
  AUTHORS   Tachiyama,S., Chan,K.L., Liu,X., Hathroubi,S., Peterson,B.,
            Khan,M.F., Ottemann,K.M., Liu,J. and Roujeinikova,A.
  TITLE     The flagellar motor protein FliL forms a scaffold of
            circumferentially positioned rings required for stator activation
  JOURNAL   Proc Natl Acad Sci U S A 119 (4) (2022)
   PUBMED   35046042
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2022 Apr 5;119(14):e2202702119.
            doi: 10.1073/pnas.2202702119.. PMID: 35363571]
REFERENCE   2  (residues 1 to 134)
  AUTHORS   Takekawa,N., Isumi,M., Terashima,H., Zhu,S., Nishino,Y., Sakuma,M.,
            Kojima,S., Homma,M. and Imada,K.
  TITLE     Structure of Vibrio FliL, a New Stomatin-like Protein That Assists
            the Bacterial Flagellar Motor Function
  JOURNAL   mBio 10 (2), e00292-19 (2019)
   PUBMED   30890608
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 134)
  AUTHORS   Schoenhals,G.J. and Macnab,R.M.
  TITLE     FliL is a membrane-associated component of the flagellar basal body
            of Salmonella
  JOURNAL   Microbiology (Reading) 145 (Pt 7), 1769-1775 (1999)
   PUBMED   10439416
REFERENCE   4  (residues 1 to 134)
  AUTHORS   Kuo,S.C. and Koshland,D.E. Jr.
  TITLE     Sequence of the flaA (cheC) locus of Escherichia coli and discovery
            of a new gene
  JOURNAL   J Bacteriol 166 (3), 1007-1012 (1986)
   PUBMED   3519573
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015693.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03748.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Pseudomonas saliphila"
                     /db_xref="taxon:2586906"
     Protein         1..134
                     /product="flagellar basal body-associated FliL family
                     protein"
                     /GO_component="GO:0009425 - bacterial-type flagellum basal
                     body [Evidence IEA]"
                     /GO_process="GO:0006935 - chemotaxis [Evidence IEA]"
                     /GO_process="GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /calculated_mol_wt=14290
     Region          16..134
                     /region_name="fliL"
                     /note="flagellar basal body-associated protein FliL;
                     Reviewed; cl00681"
                     /db_xref="CDD:469875"
ORIGIN      
        1 mkglqkalla laltcsvalp aqaatetpaa spyvdlkpsf igtigpgprl qylkvdvalr
       61 asdnaavsri eyhdplirnt lvtlfarqtp dalaglegke qlrsealqav qqvleeeegq
      121 plvtdllfnn litq
//
LOCUS       WP_235906839             802 aa            linear   BCT 02-MAR-2025
DEFINITION  SNF2-related protein [Pseudomonas saliphila].
ACCESSION   WP_235906839
VERSION     WP_235906839.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas saliphila
  ORGANISM  Pseudomonas saliphila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 802)
  AUTHORS   Rowbotham,S.P., Barki,L., Neves-Costa,A., Santos,F., Dean,W.,
            Hawkes,N., Choudhary,P., Will,W.R., Webster,J., Oxley,D.,
            Green,C.M., Varga-Weisz,P. and Mermoud,J.E.
  TITLE     Maintenance of silent chromatin through replication requires
            SWI/SNF-like chromatin remodeler SMARCAD1
  JOURNAL   Mol Cell 42 (3), 285-296 (2011)
   PUBMED   21549307
REFERENCE   2  (residues 1 to 802)
  AUTHORS   Linder,B., Cabot,R.A., Schwickert,T. and Rupp,R.A.
  TITLE     The SNF2 domain protein family in higher vertebrates displays
            dynamic expression patterns in Xenopus laevis embryos
  JOURNAL   Gene 326, 59-66 (2004)
   PUBMED   14729263
REFERENCE   3  (residues 1 to 802)
  AUTHORS   Eisen,J.A., Sweder,K.S. and Hanawalt,P.C.
  TITLE     Evolution of the SNF2 family of proteins: subfamilies with distinct
            sequences and functions
  JOURNAL   Nucleic Acids Res 23 (14), 2715-2723 (1995)
   PUBMED   7651832
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012403.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00176.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Pseudomonas saliphila"
                     /db_xref="taxon:2586906"
     Protein         1..802
                     /product="SNF2-related protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0140658 - ATP-dependent chromatin
                     remodeler activity [Evidence IEA]"
                     /calculated_mol_wt=90036
     Region          <27..480
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
ORIGIN      
        1 mgvhllraiy driwsmsrgh kgmmtmvcpp lvtpnwdrer ihcqlslevi shgslsrlkp
       61 qedsvigqll araqtlavde ahnflnqtsn rtrqllhnla dqtvlftatp inrsasdllr
      121 lvdilgadnf ddavlaifer lnrakgsvrd ahpeelrelq lavasftvrr tkaqlnamvd
      181 qepdayrtpa grvcryptht acsypldesa edvrlaeqis vlarnlkgvg hfekalylpg
      241 slakqgysse sylrmrlhsa gslarhhvma slrssrlalf rhilgeeqal ehlgleglgs
      301 iktdqesgnm lqrlerlkgr vpenqlgidl pewlsdpkah qeaceaeigi yrlilrrldr
      361 mtdgrerrkc slllelagrh dqviafdhfp ltlrylqhmi aaaakaqkie vllgvggnkv
      421 qnehlqkrld plkgsgrvia lcsdamsegv nlqrassmvh ldmpsvvrya eqrvgridrm
      481 dsphdtiecw wpldapafal kadekfvari eevesllggn lqlpqemlre elasrvvspe
      541 dfqsemqars vqpwdgieda fspvrglveg daalvrledy hqakadptav lsrvslvraq
      601 rpwlfvclag eanqaprwvf lsdehdapli nlrdvvaalr drltddvhdl qpsraaarel
      661 drllgrlsrm erlllprkkq raleqmaavl pgwakqpgwi qsseqadqik mlmdilsldg
      721 rsdcpdwgql adawldlvrp awsryldhga rkaaitrlrd iqkslladpv paqqlldrva
      781 giatrqtwee rivacvlgys at
//
LOCUS       WP_235906889             168 aa            linear   BCT 02-MAR-2025
DEFINITION  type II toxin-antitoxin system VapB family antitoxin [Brucella
            anthropi].
ACCESSION   WP_235906889
VERSION     WP_235906889.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 168)
  AUTHORS   Anantharaman,V. and Aravind,L.
  TITLE     New connections in the prokaryotic toxin-antitoxin network:
            relationship with the eukaryotic nonsense-mediated RNA decay system
  JOURNAL   Genome Biol 4 (12), R81 (2003)
   PUBMED   14659018
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019324.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07704.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..168
                     /product="type II toxin-antitoxin system VapB family
                     antitoxin"
                     /calculated_mol_wt=18670
ORIGIN      
        1 mkarqaagra cpliatgfrw qggngnkriv ssvrtacgal aflksvaipa yalttalfel
       61 rvlasvkntc alyiikihyv qgrmykmpfn vndttvdqll dqvmkkagit tkvgairaal
      121 ksfdtllnek tpvrdkftei rskrqsllgd pvqhfdqkkf mdemwedn
//
LOCUS       WP_235906904             194 aa            linear   BCT 02-MAR-2025
DEFINITION  DDE-type integrase/transposase/recombinase, partial [Brucella
            anthropi].
ACCESSION   WP_235906904
VERSION     WP_235906904.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 194)
  AUTHORS   Dyda,F., Hickman,A.B., Jenkins,T.M., Engelman,A., Craigie,R. and
            Davies,D.R.
  TITLE     Crystal structure of the catalytic domain of HIV-1 integrase:
            similarity to other polynucleotidyl transferases
  JOURNAL   Science 266 (5193), 1981-1986 (1994)
   PUBMED   7801124
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012870.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00665.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         <1..194
                     /product="DDE-type integrase/transposase/recombinase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <42..188
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 psrrtimtll wpwaklerra vcaercmygs grrsapallt plpmargfvy lcavvdwfsr
       61 kvlswrlsit meaafcieav eealarygrp difntdqgsq ftsmdfttvl kkaeiaismd
      121 gkgawrdnvf verlwrsiky eevylhaykt vsearagigr yltfynsrrp hssldrqtpd
      181 qayfnalapm mvaa
//
LOCUS       WP_235906922             156 aa            linear   BCT 02-MAR-2025
DEFINITION  competence protein ComK [Mammaliicoccus sciuri].
ACCESSION   WP_235906922
VERSION     WP_235906922.1
KEYWORDS    RefSeq.
SOURCE      Mammaliicoccus sciuri
  ORGANISM  Mammaliicoccus sciuri
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Mammaliicoccus.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Nanamiya,H., Shiomi,E., Ogura,M., Tanaka,T., Asai,K. and
            Kawamura,F.
  TITLE     Involvement of ClpX protein in the post-transcriptional regulation
            of a competence specific transcription factor, ComK protein, of
            Bacillus subtilis
  JOURNAL   J Biochem 133 (3), 295-302 (2003)
   PUBMED   12761164
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018087.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06338.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Mammaliicoccus sciuri"
                     /db_xref="taxon:1296"
     Protein         1..156
                     /product="competence protein ComK"
                     /GO_process="GO:0030420 - establishment of competence for
                     transformation [Evidence IEA]"
                     /calculated_mol_wt=18347
     Region          3..155
                     /region_name="ComK"
                     /note="ComK protein; cl11560"
                     /db_xref="CDD:472221"
ORIGIN      
        1 mtlinpnmtl lkyaddsayr fqveyidqst vytnhsipyl indalkiega slksreryak
       61 yvlniskllp iliyatedfv lfptsaksny nymlinskhi vhidaykhyt klflinqhtk
      121 viyheypiis rklgeslrli qfqkhhlyrl nlpsyi
//
LOCUS       WP_235906909             182 aa            linear   BCT 02-MAR-2025
DEFINITION  Ada metal-binding domain-containing protein [Mammaliicoccus
            sciuri].
ACCESSION   WP_235906909
VERSION     WP_235906909.1
KEYWORDS    RefSeq.
SOURCE      Mammaliicoccus sciuri
  ORGANISM  Mammaliicoccus sciuri
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Mammaliicoccus.
REFERENCE   1  (residues 1 to 182)
  AUTHORS   Sakashita,H., Sakuma,T., Ohkubo,T., Kainosho,M., Sakumi,K.,
            Sekiguchi,M. and Morikawa,K.
  TITLE     Folding topology and DNA binding of the N-terminal fragment of Ada
            protein
  JOURNAL   FEBS Lett 323 (3), 252-256 (1993)
   PUBMED   8500619
REFERENCE   2  (residues 1 to 182)
  AUTHORS   Myers,L.C., Terranova,M.P., Nash,H.M., Markus,M.A. and Verdine,G.L.
  TITLE     Zinc binding by the methylation signaling domain of the Escherichia
            coli Ada protein
  JOURNAL   Biochemistry 31 (19), 4541-4547 (1992)
   PUBMED   1581309
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014821.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02805.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Mammaliicoccus sciuri"
                     /db_xref="taxon:1296"
     Protein         1..182
                     /product="Ada metal-binding domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006281 - DNA repair [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=21675
     Region          4..>181
                     /region_name="AdaA"
                     /note="Methylphosphotriester-DNA--protein-cysteine
                     methyltransferase (N-terminal fragment of Ada), contains
                     Zn-binding and two AraC-type DNA-binding domains
                     [Replication, recombination and repair]; COG2169"
                     /db_xref="CDD:441772"
ORIGIN      
        1 myltekrwed iqtnnkland dfvyavkttm ifckpscnak lpnkenvsiy rdyheaieng
       61 yrpckkcnpt gqlledeewa lqiknfihrn yhlnltldei cnqchgskfh lsrlfkqvth
      121 qtimqylhei rieksialln enimtvedig rkvgykttsh yikvfkqfyf mtplqyrkrk
      181 ks
//
LOCUS       WP_235906932             305 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2232 domain-containing protein [Mammaliicoccus sciuri].
ACCESSION   WP_235906932
VERSION     WP_235906932.1
KEYWORDS    RefSeq.
SOURCE      Mammaliicoccus sciuri
  ORGANISM  Mammaliicoccus sciuri
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Mammaliicoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021506.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09991.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Mammaliicoccus sciuri"
                     /db_xref="taxon:1296"
     Protein         1..305
                     /product="DUF2232 domain-containing protein"
                     /calculated_mol_wt=34680
     Region          1..305
                     /region_name="DUF2232"
                     /note="Predicted membrane protein (DUF2232); cl01728"
                     /db_xref="CDD:470315"
ORIGIN      
        1 mknlsfkvdi katiiatlvl vlsaaiinfv pllailiipf itipgtilwy rskpsffvtv
       61 vitlcatvlf nhvflltamt lvifmsvfig qlliertske rmlylvttfm siltigsvli
      121 lqitgnlplt skffsqyhdv llsyfqmggn itteieeslq vsleilqasi pgyivlwvfl
      181 lvlvnlfvtf pilrkfkvat pvfrplfmwq inrsvafvfv itvlvslfvt qdnvvaygiv
      241 tnlqfvlewv ifiqalslfh lfvkvkklpi ivgviifvma fifkpfaylf glmdiwfnlk
      301 qrikk
//
LOCUS       WP_235906635             162 aa            linear   BCT 02-MAR-2025
DEFINITION  CS1 type fimbrial major subunit [Yersinia rochesterensis].
ACCESSION   WP_235906635
VERSION     WP_235906635.1
KEYWORDS    RefSeq.
SOURCE      Yersinia rochesterensis
  ORGANISM  Yersinia rochesterensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 162)
  AUTHORS   Folkesson,A., Advani,A., Sukupolvi,S., Pfeifer,J.D., Normark,S. and
            Lofdahl,S.
  TITLE     Multiple insertions of fimbrial operons correlate with the
            evolution of Salmonella serovars responsible for human disease
  JOURNAL   Mol Microbiol 33 (3), 612-622 (1999)
   PUBMED   10417651
REFERENCE   2  (residues 1 to 162)
  AUTHORS   Sakellaris,H. and Scott,J.R.
  TITLE     New tools in an old trade: CS1 pilus morphogenesis
  JOURNAL   Mol Microbiol 30 (4), 681-687 (1998)
   PUBMED   10094617
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016344.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04449.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Yersinia rochesterensis"
                     /db_xref="taxon:1604335"
     Protein         1..162
                     /product="CS1 type fimbrial major subunit"
                     /GO_component="GO:0009289 - pilus [Evidence IEA]"
                     /calculated_mol_wt=17026
     Region          28..159
                     /region_name="Fimbrial_CS1"
                     /note="CS1 type fimbrial major subunit; cl04524"
                     /db_xref="CDD:446415"
ORIGIN      
        1 mmkktllsii tvavlassti vcaqpfnkdi pvtaeingsi smtkgngdal ndialdydha
       61 sndgtyeyme nvtivsntga kvniklrnpl vlegdadggv ktfndvvvql grsqlngagt
      121 sfvlgahnel nqaltirakk paealsgety tgtlqltied di
//
LOCUS       WP_235906997              94 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Roseburia porci].
ACCESSION   WP_235906997
VERSION     WP_235906997.1
KEYWORDS    RefSeq.
SOURCE      Roseburia porci
  ORGANISM  Roseburia porci
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Roseburia.
REFERENCE   1  (residues 1 to 94)
  AUTHORS   Yang,W. and Steitz,T.A.
  TITLE     Crystal structure of the site-specific recombinase gamma delta
            resolvase complexed with a 34 bp cleavage site
  JOURNAL   Cell 82 (2), 193-207 (1995)
   PUBMED   7628011
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014814.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02796.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Roseburia porci"
                     /db_xref="taxon:2605790"
     Protein         1..94
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0000150 - DNA strand exchange activity
                     [Evidence IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /calculated_mol_wt=10995
     Region          <55..80
                     /region_name="HTH_CRP"
                     /note="helix_turn_helix, cAMP Regulatory protein
                     C-terminus; DNA binding domain of prokaryotic regulatory
                     proteins belonging to the catabolite activator protein
                     family; cl46859"
                     /db_xref="CDD:481199"
ORIGIN      
        1 mintlkeale rineleaenk qllseleyyr nrnyggrkkh neawmtaynd fvvkyeggmt
       61 imeivaesdi srrtayryka yydklkdagk kssi
//
LOCUS       WP_235906828             292 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar nucleotide-binding protein [Pseudomonas saliphila].
ACCESSION   WP_235906828
VERSION     WP_235906828.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas saliphila
  ORGANISM  Pseudomonas saliphila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 292)
  AUTHORS   Blankenfeldt,W., Kerr,I.D., Giraud,M.F., McMiken,H.J., Leonard,G.,
            Whitfield,C., Messner,P., Graninger,M. and Naismith,J.H.
  TITLE     Variation on a theme of SDR. dTDP-6-deoxy-L- lyxo-4-hexulose
            reductase (RmlD) shows a new Mg2+-dependent dimerization mode
  JOURNAL   Structure 10 (6), 773-786 (2002)
   PUBMED   12057193
REFERENCE   2  (residues 1 to 292)
  AUTHORS   Giraud,M.F., Leonard,G.A., Field,R.A., Berlind,C. and Naismith,J.H.
  TITLE     RmlC, the third enzyme of dTDP-L-rhamnose pathway, is a new class
            of epimerase
  JOURNAL   Nat Struct Biol 7 (5), 398-402 (2000)
   PUBMED   10802738
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016228.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04321.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Pseudomonas saliphila"
                     /db_xref="taxon:2586906"
     Protein         1..292
                     /product="sugar nucleotide-binding protein"
                     /calculated_mol_wt=32305
     Region          3..287
                     /region_name="RmlD_sub_bind"
                     /note="RmlD substrate binding domain; pfam04321"
                     /db_xref="CDD:427865"
ORIGIN      
        1 mrvlllgges rlgqallsqa aaesiridap arpkdgwlag tiddcldifq pdlvidlayy
       61 heqfqlslhn epqlasqray geqliracss rgitsfmvss trvfdglkkt tyterdkpap
      121 gesvgelqaa leslirsvsd rhlilrfswl ldsspdgqlg rllnqlqhqd pvqlaeewrg
      181 nptpvadaar vmlavlkqld ceapvhgvyh ygstepttwi sfaqsvtqel lathrldkdp
      241 vihpmpfntt pmaglepqna slvsrkilmt ygikprswrs qlpellksve sa
//
LOCUS       WP_235907028             465 aa            linear   BCT 02-MAR-2025
DEFINITION  cell wall hydrolase [Roseburia porci].
ACCESSION   WP_235907028
VERSION     WP_235907028.1
KEYWORDS    RefSeq.
SOURCE      Roseburia porci
  ORGANISM  Roseburia porci
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Roseburia.
REFERENCE   1  (residues 1 to 465)
  AUTHORS   Boland,F.M., Atrih,A., Chirakkal,H., Foster,S.J. and Moir,A.
  TITLE     Complete spore-cortex hydrolysis during germination of Bacillus
            subtilis 168 requires SleB and YpeB
  JOURNAL   Microbiology (Reading) 146 (Pt 1), 57-64 (2000)
   PUBMED   10658652
REFERENCE   2  (residues 1 to 465)
  AUTHORS   Ishikawa,S., Yamane,K. and Sekiguchi,J.
  TITLE     Regulation and characterization of a newly deduced cell wall
            hydrolase gene (cwlJ) which affects germination of Bacillus
            subtilis spores
  JOURNAL   J Bacteriol 180 (6), 1375-1380 (1998)
   PUBMED   9515903
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019128.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07486.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Roseburia porci"
                     /db_xref="taxon:2605790"
     Protein         1..465
                     /product="cell wall hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=50917
     Region          47..342
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     Region          352..465
                     /region_name="CwlJ"
                     /note="Cell wall hydrolase CwlJ, involved in spore
                     germination [Cell cycle control, cell division, chromosome
                     partitioning, Cell wall/membrane/envelope biogenesis];
                     COG3773"
                     /db_xref="CDD:442987"
ORIGIN      
        1 makhhmikai clstavcmav ataaipagaa etgnsdtses iedmkqkqqd aqdsadalee
       61 akkkleasig dmnsdlgdig ssieeiqdki seteakites eqlladaqaa adkqyadmkk
      121 riqfmyensd rsiwitllea gsfaefvnrv qyiadvsayd rnmlntyqet qqtiasykdt
      181 leqqktella sqeelknken dlnqviasrq seledtsdaq qesqqqadqy adqiaameef
      241 erqmeeqkaa edaanmamik qqeeelrqeq eaakqrreea krqqqaqneq qaqnpdnagd
      301 tsgsdqngdn nggtdtqpgs gdnngsdntg nntnpgttdp gtdtdiddnp fanvsesevy
      361 llaciidces egepyagqla vgsvvlnrve skyfpdtitg viyqknqfsp vasgrlayml
      421 drgptarcmk aarevlggnr tvsclyfrvn tgvisgtvig hhvfy
//
LOCUS       WP_235907059             507 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Roseburia porci].
ACCESSION   WP_235907059
VERSION     WP_235907059.1
KEYWORDS    RefSeq.
SOURCE      Roseburia porci
  ORGANISM  Roseburia porci
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Roseburia.
REFERENCE   1  (residues 1 to 507)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 507)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 507)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Roseburia porci"
                     /db_xref="taxon:2605790"
     Protein         1..507
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=55876
     Region          59..156
                     /region_name="NEAT"
                     /note="NEAr Transport domain, a component of cell surface
                     proteins; cl02760"
                     /db_xref="CDD:470669"
     Region          228..473
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(305..306,309,337)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238347"
ORIGIN      
        1 mnkkkiaavm lsvfmcmqif agcgtgsnqn atetadqsgt eqagnvtese tdevavledg
       61 eytvnvtleg gsgkatvdqq akvtvkdgqa yativwssth ydymlvddqk ytneneggns
      121 tftfpisgvp cqmdvvgdtt amstpheidy tltfsfpedv sfndlecngs mklsyadqfs
      181 veqygaykmi tivnngrfll ipkgvsepsd vpsdvvvlqq plnhvymvss avmdlvcqvd
      241 alshvtytgt kqsdwyvqka adamedgsli yagkysapdy emllaggcnf aventmithn
      301 pevkekleel giqvmverss yekhplgrle wiklfgvlfg reqqakaffe eqearvtpil
      361 ekentgrsva ffsvasdgti tvrkpndyva smielaggny slngyvdgee nalstmkmqm
      421 edfyaaekda dvliyngtie geltsidell kknslfadfk avksgqvytt gsnfyqqtse
      481 tcdfiedlnk iltqdtdtey hflkkld
//
LOCUS       WP_235907063             419 aa            linear   BCT 02-MAR-2025
DEFINITION  cytosine permease [Roseburia porci].
ACCESSION   WP_235907063
VERSION     WP_235907063.1
KEYWORDS    RefSeq.
SOURCE      Roseburia porci
  ORGANISM  Roseburia porci
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Roseburia.
REFERENCE   1  (residues 1 to 419)
  AUTHORS   Vickers,M.F., Yao,S.Y., Baldwin,S.A., Young,J.D. and Cass,C.E.
  TITLE     Nucleoside transporter proteins of Saccharomyces cerevisiae.
            Demonstration of a transporter (FUI1) with high uridine selectivity
            in plasma membranes and a transporter (FUN26) with broad nucleoside
            selectivity in intracellular membranes
  JOURNAL   J Biol Chem 275 (34), 25931-25938 (2000)
   PUBMED   10827169
REFERENCE   2  (residues 1 to 419)
  AUTHORS   Danielsen,S., Kilstrup,M., Barilla,K., Jochimsen,B. and Neuhard,J.
  TITLE     Characterization of the Escherichia coli codBA operon encoding
            cytosine permease and cytosine deaminase
  JOURNAL   Mol Microbiol 6 (10), 1335-1344 (1992)
   PUBMED   1640834
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014218.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02133.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Roseburia porci"
                     /db_xref="taxon:2605790"
     Protein         1..419
                     /product="cytosine permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44313
     Region          11..414
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     Site            order(31,34,279,282..283)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271377"
     Site            order(35,110,114,206..207,209,284,288)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:271377"
ORIGIN      
        1 menkkdgefs qtsvpmsqrk sfweicvvwi gyvfvvtgmq vggtmgvstd fatllkalgv
       61 gslillvlgs fmglialktg ltfgklcrya fgtygshvis lmivltligw fsvdaymigq
      121 asnalfpalp iipiaiaggv gmtitalfgm kwmsklsdia vplvlifgii sivlsvkstg
      181 gltglfsiqp dnplsfnelv slsigsfvcg avsftpdvlr faknkkqtli imflamilan
      241 plmiilgavg aiatgysdit yvlasqglla pafivmilni wstaqgcvys gslslgntvp
      301 akrtylvlgf glagtigavv gfynyfgnfi nflattipal ggvfiadylv tyragypsle
      361 dgsipkikwq afvawglgia tnyvhfgitq vnciivafvl eavlsvvfhp vkakvvsaa
//
LOCUS       WP_235907080             115 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: transposase [Roseburia].
ACCESSION   WP_235907080
VERSION     WP_235907080.1
KEYWORDS    RefSeq.
SOURCE      Roseburia
  ORGANISM  Roseburia
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae.
REFERENCE   1  (residues 1 to 115)
  AUTHORS   Mullin,D.A., Zies,D.L., Mullin,A.H., Caballera,N. and Ely,B.
  TITLE     Genetic organization and transposition properties of IS511
  JOURNAL   Mol Gen Genet 254 (4), 456-463 (1997)
   PUBMED   9180700
REFERENCE   2  (residues 1 to 115)
  AUTHORS   Fischer,J., Maier,H., Viell,P. and Altenbuchner,J.
  TITLE     The use of an improved transposon mutagenesis system for DNA
            sequencing leads to the characterization of a new insertion
            sequence of Streptomyces lividans 66
  JOURNAL   Gene 180 (1-2), 81-89 (1996)
   PUBMED   8973350
REFERENCE   3  (residues 1 to 115)
  AUTHORS   Zekri,S. and Toro,N.
  TITLE     Identification and nucleotide sequence of Rhizobium meliloti
            insertion sequence ISRm6, a small transposable element that belongs
            to the IS3 family
  JOURNAL   Gene 175 (1-2), 43-48 (1996)
   PUBMED   8917074
  REMARK    Erratum:[Gene 1997 Mar 25;188(1):149]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01527.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Roseburia"
                     /db_xref="taxon:841"
     Protein         1..115
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=13395
     Region          1..97
                     /region_name="InsE"
                     /note="Transposase InsE and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2963"
                     /db_xref="CDD:442203"
ORIGIN      
        1 msrqrrnfsa kfksdlviel lkgekdlntl avenniqpnl lrnwkkefld nasavfddkr
       61 ednlkeklae erkekaeyak kvgqltmqvd wlkkkseeic gpdyeskfsp kpfdd
//
LOCUS       WP_235907095             394 aa            linear   BCT 02-MAR-2025
DEFINITION  HNH endonuclease domain-containing protein [Roseburia porci].
ACCESSION   WP_235907095
VERSION     WP_235907095.1
KEYWORDS    RefSeq.
SOURCE      Roseburia porci
  ORGANISM  Roseburia porci
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Roseburia.
REFERENCE   1  (residues 1 to 394)
  AUTHORS   Harrington,L.B., Doxzen,K.W., Ma,E., Liu,J.J., Knott,G.J.,
            Edraki,A., Garcia,B., Amrani,N., Chen,J.S., Cofsky,J.C.,
            Kranzusch,P.J., Sontheimer,E.J., Davidson,A.R., Maxwell,K.L. and
            Doudna,J.A.
  TITLE     A Broad-Spectrum Inhibitor of CRISPR-Cas9
  JOURNAL   Cell 170 (6), 1224-1233 (2017)
   PUBMED   28844692
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024787.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13395.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Roseburia porci"
                     /db_xref="taxon:2605790"
     Protein         1..394
                     /product="HNH endonuclease domain-containing protein"
                     /calculated_mol_wt=46211
     Region          268..311
                     /region_name="HNHc"
                     /note="HNH nucleases; HNH endonuclease signature which is
                     found in viral, prokaryotic, and eukaryotic proteins. The
                     alignment includes members of the large group of homing
                     endonucleases, yeast intron 1 protein, MutS, as well as
                     bacterial colicins, pyocins, and...; cl00083"
                     /db_xref="CDD:469607"
     Site            order(277,279..281,283,294..295,299..300,303,307)
                     /site_type="active"
                     /db_xref="CDD:238038"
ORIGIN      
        1 mfygegkila dliidkkyyn aldiegfskm mnspsycykf ywleaivqli senkteatyd
       61 eiinkmisna wypvleyhih lsgiygegii kdnlekavlr lkklsqldnd agnieiinkl
      121 hefsedkelt dykkaltlnv pykslsgfan rgtekidlns sagrmmayyn rlsqseillp
      181 ytfnddkglk rgitfnnswi qmirdntvni lgwiqlekvk wlqnnnpevp glvyklapad
      241 ekmrkltnar klwnavlnvv pivdvfkdel idtekydldh fipwsfvmnd elwnlmpmds
      301 slnskksnkl pqwdlffdrf adnqftlyel lydkpgihkl yeacyrdnlh siwanqelyr
      361 kgnsreefhv ilnknmrpvy dsarrqgyei wnla
//
LOCUS       WP_235907131             461 aa            linear   BCT 02-MAR-2025
DEFINITION  amino acid permease [Niallia circulans].
ACCESSION   WP_235907131
VERSION     WP_235907131.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..461
                     /product="amino acid permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=48579
     Region          22..452
                     /region_name="2A0306"
                     /note="amino acid transporter; TIGR00909"
                     /db_xref="CDD:129987"
ORIGIN      
        1 msqlfrrksv nvmisqsqnk tlsrsmgimd liflgvgcvi gtgifvvtgv vaaesagpai
       61 ilsfvlagia calaafcyae fssavplsgs vytytyatlg elfafligwd lmmeyvlaia
      121 avatgwsayf qsliagfnln lpasitsapg vgkgglvdlp amliilaita lvskgvkesi
      181 kfnnimvfvk lavillfiiv gvwyvkpdnw tpfmpfgfdg iitgaatvff ayigfdviat
      241 aseevknpgk tmpigiigsl aictvlyiav savltgmipf tqlgvgapvs lalesvgqns
      301 vagiisigav mgittvilal iyaqvrlsya msrdgllpkm lssvnnktkt pfkntwltgi
      361 iaaciagfvd lstlahlvnm gtlaaftlis iaiivlrkkf pelkgsfrvp fvpvlpiisa
      421 llciglaisl pgitwiafvi wlavgtviyf vfskknskln n
//
LOCUS       WP_235907149             416 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Niallia circulans].
ACCESSION   WP_235907149
VERSION     WP_235907149.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 416)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 416)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 416)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 416)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..416
                     /product="ATP-binding protein"
                     /calculated_mol_wt=46817
     Region          14..>178
                     /region_name="dCache_1"
                     /note="Cache domain; pfam02743"
                     /db_xref="CDD:460673"
     Region          <213..413
                     /region_name="CitA"
                     /note="Sensor histidine kinase DipB regulating
                     citrate/malate metabolism [Signal transduction
                     mechanisms]; COG3290"
                     /db_xref="CDD:442519"
ORIGIN      
        1 mmvniyssys sikktaensi vnqnietakk iaasldtety kkflenpvks keyhviqryl
       61 edakekngsl hvytllvnnp nvtramival qdseqefpig gictipkeqv vkayngktfs
      121 tdiiqdpiyg eyltvgvpik dqkdeiigyl gidispdtin nvskkalkss isafifsglf
      181 vilmlvaffv lqkwytrelk kevgdtedty qfelqsliss vqslrhdysn hiqvlhgllk
      241 lgltdkandy iatltkevhl iqsinlnvsn pglsvllqtk klaaqnhnid iqfdvidnky
      301 kkiastdlik ilsnlidnai datidlpeeq rkmsitckad dktylfeicn tghpindkvk
      361 eqifkrgfst kkaqrgkirg qglfivkevv nryggeisiq sqkqetiarv eiptnk
//
LOCUS       WP_235907163             490 aa            linear   BCT 02-MAR-2025
DEFINITION  HNH endonuclease [Niallia circulans].
ACCESSION   WP_235907163
VERSION     WP_235907163.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 490)
  AUTHORS   Zhang,L., Huang,Y., Xu,D., Yang,L., Qian,K., Chang,G., Gong,Y.,
            Zhou,X. and Ma,K.
  TITLE     Biochemical characterization of a thermostable HNH endonuclease
            from deep-sea thermophilic bacteriophage GVE2
  JOURNAL   Appl Microbiol Biotechnol 100 (18), 8003-8012 (2016)
   PUBMED   27131500
REFERENCE   2  (residues 1 to 490)
  AUTHORS   Dalgaard,J.Z., Klar,A.J., Moser,M.J., Holley,W.R., Chatterjee,A.
            and Mian,I.S.
  TITLE     Statistical modeling and analysis of the LAGLIDADG family of
            site-specific endonucleases and identification of an intein that
            encodes a site-specific endonuclease of the HNH family
  JOURNAL   Nucleic Acids Res 25 (22), 4626-4638 (1997)
   PUBMED   9358175
REFERENCE   3  (residues 1 to 490)
  AUTHORS   Shub,D.A., Goodrich-Blair,H. and Eddy,S.R.
  TITLE     Amino acid sequence motif of group I intron endonucleases is
            conserved in open reading frames of group II introns
  JOURNAL   Trends Biochem Sci 19 (10), 402-404 (1994)
   PUBMED   7817395
REFERENCE   4  (residues 1 to 490)
  AUTHORS   Gorbalenya,A.E.
  TITLE     Self-splicing group I and group II introns encode homologous
            (putative) DNA endonucleases of a new family
  JOURNAL   Protein Sci 3 (7), 1117-1120 (1994)
   PUBMED   7920259
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013964.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01844.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..490
                     /product="HNH endonuclease"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=56551
     Region          274..360
                     /region_name="COG3183"
                     /note="Predicted restriction endonuclease, HNH family
                     [Defense mechanisms]"
                     /db_xref="CDD:442416"
     Region          360..472
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mnivdaikyv veevedpale hpdledsfks kvkrtkilvn rmkkigdlnr ylkrfeivpp
       61 vgdpkrelyd rlkglnlkty edlypefvqk fanyiddvtv lddfvigsey tswdisifsr
      121 tydtqsgiyl igdepnyqai fvkatfaegk ypnewiesnn vlkyymyslk svfkkeykyn
      181 aaiinsvrtn tpiyvfqkdd trltlkgiyr yesdhsnped esrwfilhkv ntidtkklmt
      241 ieefnnelgk kvdnskretr eqrrnrlrna ekipgksvvt ltqfkrnpdv iaevltrang
      301 vcdkcrkpat firasdlspy levhhkisla eggedtvana valcpnchre fhhaakvttv
      361 vvgilinqge illescadek wklpggslkt ndtperalrr elkeafgmrl klgkyfgegi
      421 ykegseiyrv mayniknine dfnykelqfi nlsmltivdf lplqspivnq lldrntvgsl
      481 itgrkgrnhe
//
LOCUS       WP_235907183             376 aa            linear   BCT 02-MAR-2025
DEFINITION  SH3 domain-containing protein [Niallia circulans].
ACCESSION   WP_235907183
VERSION     WP_235907183.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019844.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08239.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..376
                     /product="SH3 domain-containing protein"
                     /calculated_mol_wt=40118
     Region          32..156
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          187..369
                     /region_name="COG3786"
                     /note="L,D-peptidoglycan transpeptidase YkuD,
                     ErfK/YbiS/YcfS/YnhG family [Cell wall/membrane/envelope
                     biogenesis]"
                     /db_xref="CDD:443000"
ORIGIN      
        1 mkkyicmllt cliissslvv gtgmltpsva eaassvtytv tadtlnvrsg sstkskvigs
       61 vkkgtklsvq kkesngwyki tfkgktgyvs gsyvkattsa pkttytvtad tlnvrsgsst
      121 kskvigsvkk gtklsvqkke sngwykidfk gktgyvsgty vkatsssnss skqsivdtvn
      181 nmktlgnaqq lilvtsanss sktatirtfe kskgkwkqvn smtgvlgkkg mtdkmsegsq
      241 asptgkytig tafgrganpg tklpyrkitn ddvwvddpas slyntwqkas knngrwksae
      301 kmnipeydlg fvinyntknp vagkgsaiff hvagkygyta gctatsksnv ttvlkwlnpd
      361 knpviiqtpd sglgky
//
LOCUS       WP_235907213             374 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6688 domain-containing protein [Niallia circulans].
ACCESSION   WP_235907213
VERSION     WP_235907213.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042563.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20394.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..374
                     /product="DUF6688 domain-containing protein"
                     /calculated_mol_wt=43101
     Region          1..373
                     /region_name="DUF6688"
                     /note="Family of unknown function (DUF6688); pfam20394"
                     /db_xref="CDD:466543"
ORIGIN      
        1 millilisvp iyslilmvrs fkrktkhdak agtvkmktrd sllsigiycl fllgfylnss
       61 avdageplri yeftgaksng yasfaneyiv avivlitlgm lsfflasisy ksispivyvi
      121 cstliianii lavvylthtg fshdgeeysv lllqisfqsl iflfisrlkd fldyfldrqn
      181 eketeynnkf ilflyrisnn dqkmsklwvi clfpvliifq lvlvlfgqrp dsfirvflet
      241 ssfiyskipa pkpelvegdg hylctvtvkg hkklvktira gvrrgirisv nrqllianal
      301 enileqyvpt ihkvirnfyd rygypisrhi nskwsadiiy llmkplewff lfglytidkk
      361 penrihiqys elrk
//
LOCUS       WP_235907263             425 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Niallia circulans].
ACCESSION   WP_235907263
VERSION     WP_235907263.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 425)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 425)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 425)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 425)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..425
                     /product="ATP-binding protein"
                     /calculated_mol_wt=48225
     Region          <59..412
                     /region_name="KinE"
                     /note="Sporulation sensor histidine kinase E [Cell cycle
                     control, cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG5809"
                     /db_xref="CDD:444511"
ORIGIN      
        1 mvvkspkmrr rgqvvlvlvs iiftlyqhla dnesfftldf fiftaiawfv gfqidlgsyy
       61 eqkarlsees yrllvdslpe pifihhknki iyvnkaavmm mganstqdli grsfgefiap
      121 ehkerwemrm slvktenkpl hhieykmmrl dqsvfyfevs claitfdgkn avlalgtdit
      181 erkertsqyv qksekmamlg qmsagiahei rnpltaikgf iqllksdddk neyleivlse
      241 ierintivge flflakptad vfqkkninni indvvtfina qsnlyntqiy tmmddnipli
      301 lceenrlkqv flnllqnsie ampnggiiai svkmiegeqi viqiadqgmg ieeerlatlg
      361 epfyttkekg tglglmtcyk iieeghrgqm siqstvgkgt tvqiilpslt qemlgtsiht
      421 kfake
//
LOCUS       WP_235907272             335 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Niallia circulans].
ACCESSION   WP_235907272
VERSION     WP_235907272.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 335)
  AUTHORS   Swint-Kruse,L. and Matthews,K.S.
  TITLE     Allostery in the LacI/GalR family: variations on a theme
  JOURNAL   Curr Opin Microbiol 12 (2), 129-137 (2009)
   PUBMED   19269243
REFERENCE   2  (residues 1 to 335)
  AUTHORS   Fukami-Kobayashi,K., Tateno,Y. and Nishikawa,K.
  TITLE     Parallel evolution of ligand specificity between LacI/GalR family
            repressors and periplasmic sugar-binding proteins
  JOURNAL   Mol Biol Evol 20 (2), 267-277 (2003)
   PUBMED   12598694
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13377.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..335
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=38330
     Region          5..71
                     /region_name="HTH_XRE"
                     /note="Helix-turn-helix XRE-family like proteins.
                     Prokaryotic DNA binding proteins belonging to the
                     xenobiotic response element family of transcriptional
                     regulators; cl22854"
                     /db_xref="CDD:473980"
     Site            order(8,16..20,22..23,26,31..32,35,48,51,54..55,57..58)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143331"
     Site            48..57
                     /site_type="active"
                     /note="domain linker motif [active]"
                     /db_xref="CDD:143331"
     Region          64..330
                     /region_name="PBP1_LacI-like"
                     /note="ligand-binding domain of uncharacterized
                     DNA-binding regulatory proteins that are members of the
                     LacI-GalR family of bacterial transcription repressors;
                     cd19974"
                     /db_xref="CDD:380629"
     Site            order(64,81..83,86..87,89..90,97..101,103,114,117,
                     120..122,228,252,256,259..260)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:380629"
     Site            order(80..81,84,129,151,164,200,225,275,292)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:380629"
ORIGIN      
        1 mrsnvtmrdi atklgvssvt vskalndkdg vseelkekik llaeemgyrf nthaksikdg
       61 lsynlgivip erftgttqsf ylqfyqmltk ildgyhysgi lyilgqeded qlilpriyne
      121 kkvdgfiilg qigneyvkei qkidspvifl dfytdqneid svltdnffgg yeitnylven
      181 ghekiayvgn iyatssiqdr flgyykslle hrielrqdyi iydrdergky idivfpddmp
      241 tafvcnndei aynlinnlqk ngyqvpedcs vvgfdnsiya altepllttv evnmkemska
      301 avkiimeklh npnekygrtl ingkiihrns vkkls
//
LOCUS       WP_235907291              69 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-finger domain-containing protein [Niallia circulans].
ACCESSION   WP_235907291
VERSION     WP_235907291.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10782.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..69
                     /product="zinc-finger domain-containing protein"
                     /calculated_mol_wt=8010
     Region          3..58
                     /region_name="zf-C2HCIx2C"
                     /note="Zinc-finger; pfam10782"
                     /db_xref="CDD:402422"
ORIGIN      
        1 msdrkkwlqr aenlmndyck gcflyehnkt dkgkrhahrf cisectvgle ikkygdmlag
       61 nikeedkks
//
LOCUS       WP_235907298             196 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease [Niallia circulans].
ACCESSION   WP_235907298
VERSION     WP_235907298.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 196)
  AUTHORS   Bujnicki,J.M. and Rychlewski,L.
  TITLE     Identification of a PD-(D/E)XK-like domain with a novel
            configuration of the endonuclease active site in the
            methyl-directed restriction enzyme Mrr and its homologs
  JOURNAL   Gene 267 (2), 183-191 (2001)
   PUBMED   11313145
REFERENCE   2  (residues 1 to 196)
  AUTHORS   Waite-Rees,P.A., Keating,C.J., Moran,L.S., Slatko,B.E.,
            Hornstra,L.J. and Benner,J.S.
  TITLE     Characterization and expression of the Escherichia coli Mrr
            restriction system
  JOURNAL   J Bacteriol 173 (16), 5207-5219 (1991)
   PUBMED   1650347
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016362.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04471.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..196
                     /product="restriction endonuclease"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_process="GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /calculated_mol_wt=21776
     Region          76..188
                     /region_name="Mrr_cat"
                     /note="Restriction endonuclease; cl46443"
                     /db_xref="CDD:480783"
ORIGIN      
        1 mlfleliagi livlafihff wtkkqdeykg rlimqhlhts qdmkktlalg lylrflpagk
       61 qvekhslllk ddvtleafia sllektrggt awvladadrl ginlehqtke glflgqivrs
      121 eneigfeqia lvhsnivkkr aaggyvvtag mfsedaiyya kglnielidg vgltdlwlas
      181 lgiaekeiqk ilpqlt
//
LOCUS       WP_235907344             660 aa            linear   BCT 02-MAR-2025
DEFINITION  SH3 domain-containing protein [Priestia megaterium].
ACCESSION   WP_235907344
VERSION     WP_235907344.1
KEYWORDS    RefSeq.
SOURCE      Priestia megaterium (Bacillus megaterium)
  ORGANISM  Priestia megaterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019844.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08239.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Priestia megaterium"
                     /db_xref="taxon:1404"
     Protein         1..660
                     /product="SH3 domain-containing protein"
                     /calculated_mol_wt=68138
     Region          27..157
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          101..234
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          177..311
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          254..388
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          331..457
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          461..657
                     /region_name="AmiC"
                     /note="N-acetylmuramoyl-L-alanine amidase [Cell
                     wall/membrane/envelope biogenesis]; COG0860"
                     /db_xref="CDD:440621"
ORIGIN      
        1 mnkkhvmyta vssvllsssl llhsidadaa esakvtatsl nvratpstsg aivgkvtkgn
       61 tvnivdeskg wakityngke awissqyink tqtnststan stsksavvna sslnvrssas
      121 tsasivtnls rgskvtvvke sgswsqikta sgqtgwvasq ylqagsgsst ppsnsgstts
      181 ksavvnassl nvrssastsa sivtnlsrgs kvtvvkesgs wsqiktasgq tgwvasqylq
      241 agsgsstpps nsgsttsksa vvnasslnvr ssastsasiv tnlsrgskvt vvkesgswsq
      301 iktasgqtgw vasqylqags assapakdsg stssksavvn asslnvrssa stsasvvtnl
      361 prnskvmvlk esgswsqikt asgqtgwvas qylqansgqs sqpaqsiqit kasnlrsqps
      421 lsagiirvak agerfkkvge tndwvqiqys asqtawvskg ltaaagstts aslpspsaal
      481 kdkiivvdag hggydpgtsg kssieknlal ttaklvasrl anaganvfmt rsndtfisls
      541 grvnvseakh adafisvhyn astsssangi asfyyseakd kelakyiqes maenapsmkd
      601 mgvrfgdyyv trennqravl lelgflsnah deqivssnay qqqistgiyq giaryfaank
//
LOCUS       WP_235907375             133 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidoglycan-binding protein [Priestia megaterium].
ACCESSION   WP_235907375
VERSION     WP_235907375.1
KEYWORDS    RefSeq.
SOURCE      Priestia megaterium (Bacillus megaterium)
  ORGANISM  Priestia megaterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
REFERENCE   1  (residues 1 to 133)
  AUTHORS   Briers,Y., Volckaert,G., Cornelissen,A., Lagaert,S., Michiels,C.W.,
            Hertveldt,K. and Lavigne,R.
  TITLE     Muralytic activity and modular structure of the endolysins of
            Pseudomonas aeruginosa bacteriophages phiKZ and EL
  JOURNAL   Mol Microbiol 65 (5), 1334-1344 (2007)
   PUBMED   17697255
REFERENCE   2  (residues 1 to 133)
  AUTHORS   Gooley,P.R., O'Connell,J.F., Marcy,A.I., Cuca,G.C., Salowe,S.P.,
            Bush,B.L., Hermes,J.D., Esser,C.K., Hagmann,W.K., Springer,J.P. et
            al.
  TITLE     The NMR structure of the inhibited catalytic domain of human
            stromelysin-1
  JOURNAL   Nat Struct Biol 1 (2), 111-118 (1994)
   PUBMED   7656014
REFERENCE   3  (residues 1 to 133)
  AUTHORS   Foster,S.J.
  TITLE     Cloning, expression, sequence analysis and biochemical
            characterization of an autolytic amidase of Bacillus subtilis 168
            trpC2
  JOURNAL   J Gen Microbiol 137 (8), 1987-1998 (1991)
   PUBMED   1683402
REFERENCE   4  (residues 1 to 133)
  AUTHORS   Dideberg,O., Charlier,P., Dive,G., Joris,B., Frere,J.M. and
            Ghuysen,J.M.
  TITLE     Structure of a Zn2+-containing D-alanyl-D-alanine-cleaving
            carboxypeptidase at 2.5 A resolution
  JOURNAL   Nature 299 (5882), 469-470 (1982)
   PUBMED   7121588
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013625.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01471.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Priestia megaterium"
                     /db_xref="taxon:1404"
     Protein         1..133
                     /product="peptidoglycan-binding protein"
                     /calculated_mol_wt=14342
     Region          2..34
                     /region_name="CapE_47_fam"
                     /note="CapE family protein; NF040516"
                     /db_xref="CDD:439733"
     Region          62..118
                     /region_name="PGRP"
                     /note="Peptidoglycan-binding (PGRP) domain of
                     peptidoglycan hydrolases [Cell wall/membrane/envelope
                     biogenesis]; COG3409"
                     /db_xref="CDD:442635"
ORIGIN      
        1 mkifvpiiiv agfffimsnf khtqtlssae ekrikeyasl mqqakakeed ktqilslssv
       61 aalgkgsage evktvqkflg lnpdgyfgle teqavkefqv kngytadgvv gpqtwdalvn
      121 mskdtaasts nsl
//
LOCUS       WP_235907378             302 aa            linear   BCT 02-MAR-2025
DEFINITION  BadF/BadG/BcrA/BcrD ATPase family protein [Priestia megaterium].
ACCESSION   WP_235907378
VERSION     WP_235907378.1
KEYWORDS    RefSeq.
SOURCE      Priestia megaterium (Bacillus megaterium)
  ORGANISM  Priestia megaterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
REFERENCE   1  (residues 1 to 302)
  AUTHORS   Breese,K., Boll,M., Alt-Morbe,J., Schagger,H. and Fuchs,G.
  TITLE     Genes coding for the benzoyl-CoA pathway of anaerobic aromatic
            metabolism in the bacterium Thauera aromatica
  JOURNAL   Eur J Biochem 256 (1), 148-154 (1998)
   PUBMED   9746358
REFERENCE   2  (residues 1 to 302)
  AUTHORS   Egland,P.G., Pelletier,D.A., Dispensa,M., Gibson,J. and
            Harwood,C.S.
  TITLE     A cluster of bacterial genes for anaerobic benzene ring
            biodegradation
  JOURNAL   Proc Natl Acad Sci U S A 94 (12), 6484-6489 (1997)
   PUBMED   9177244
REFERENCE   3  (residues 1 to 302)
  AUTHORS   Bendrat,K., Muller,U., Klees,A.G. and Buckel,W.
  TITLE     Identification of the gene encoding the activator of
            (R)-2-hydroxyglutaryl-CoA dehydratase from Acidaminococcus
            fermentans by gene expression in Escherichia coli
  JOURNAL   FEBS Lett 329 (3), 329-331 (1993)
   PUBMED   8365476
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013986.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01869.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Priestia megaterium"
                     /db_xref="taxon:1404"
     Protein         1..302
                     /product="BadF/BadG/BcrA/BcrD ATPase family protein"
                     /calculated_mol_wt=33205
     Region          9..296
                     /region_name="ASKHA_NBD_eukNAGK-like"
                     /note="nucleotide-binding domain (NBD) of the
                     eukaryotic-type N-acetylglucosamine kinase (NAGK) family;
                     cd24007"
                     /db_xref="CDD:466857"
ORIGIN      
        1 msgdemdyii gidgggtkte avaysldgqq laasksdygn llinyntait hidecimack
       61 telaghtckg islglagska lskeeikryf ynryqvevgl yddamiahea llhgkegilt
      121 iagtgavsig kkdgvyeygg gwghllgdeg sgywiglqal illtkehdqn rpysslsqti
      181 lqhvkadtih dikkfvyssp ksevasltpl vvnqarnykq easdilqrag knlanmtlhl
      241 ykkqrfegsc llackgsilm evpevfdvyk ktcekeikhi qwatqrvssa kgayqlfmke
      301 yq
//
LOCUS       WP_235907492             206 aa            linear   BCT 02-MAR-2025
DEFINITION  winged helix-turn-helix domain-containing protein [Brucella
            anthropi].
ACCESSION   WP_235907492
VERSION     WP_235907492.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 206)
  AUTHORS   Wietzorrek,A. and Bibb,M.
  TITLE     A novel family of proteins that regulates antibiotic production in
            streptomycetes appears to contain an OmpR-like DNA-binding fold
  JOURNAL   Mol Microbiol 25 (6), 1181-1184 (1997)
   PUBMED   9350875
REFERENCE   2  (residues 1 to 206)
  AUTHORS   Martinez-Hackert,E. and Stock,A.M.
  TITLE     The DNA-binding domain of OmpR: crystal structures of a winged
            helix transcription factor
  JOURNAL   Structure 5 (1), 109-124 (1997)
   PUBMED   9016718
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012698.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00486.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..206
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=23476
     Region          5..202
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
ORIGIN      
        1 mpslmdlqas snfateaipy ailfdtsent epifdvcati kqnpatrgvi lvaltkpcns
       61 mnfldflhag fdeifphpfv perilsflhd resmplerkt ltsdrrervh igdlsilpde
      121 rilrlgslei rltptefril rgfiaapgqv mkreqlikig wpahhyvqlr tvdvhvgnlr
      181 rqlwkltgkn lirtvhttgy afefsq
//
LOCUS       WP_235907430             234 aa            linear   BCT 02-MAR-2025
DEFINITION  LysM peptidoglycan-binding domain-containing protein, partial
            [Priestia megaterium].
ACCESSION   WP_235907430
VERSION     WP_235907430.1
KEYWORDS    RefSeq.
SOURCE      Priestia megaterium (Bacillus megaterium)
  ORGANISM  Priestia megaterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
REFERENCE   1  (residues 1 to 234)
  AUTHORS   Bateman,A. and Bycroft,M.
  TITLE     The structure of a LysM domain from E. coli membrane-bound lytic
            murein transglycosylase D (MltD)
  JOURNAL   J Mol Biol 299 (4), 1113-1119 (2000)
   PUBMED   10843862
REFERENCE   2  (residues 1 to 234)
  AUTHORS   Joris,B., Englebert,S., Chu,C.P., Kariyama,R., Daneo-Moore,L.,
            Shockman,G.D. and Ghuysen,J.M.
  TITLE     Modular design of the Enterococcus hirae muramidase-2 and
            Streptococcus faecalis autolysin
  JOURNAL   FEMS Microbiol Lett 70 (3), 257-264 (1992)
   PUBMED   1352512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01476.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Priestia megaterium"
                     /db_xref="taxon:1404"
     Protein         1..>234
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
     Region          <9..>120
                     /region_name="PRK06347"
                     /note="1,4-beta-N-acetylmuramoylhydrolase"
                     /db_xref="CDD:180536"
ORIGIN      
        1 mkkfvftlgt tailsagfvg aasastsgty evqkgdtlwk iaqnhnvsvd elkdannlts
       61 tliypnqtln lssikeivht vkrgdtlwsi gqhygvtvee ikewngltsd lvfpgeqfki
      121 kaaqaaqsqt asapvakaap qvqqsqtaqa qqeqaaqeqa qkeqeqaqva aqeqaqkeqe
      181 qaqaaaqeqa qkeqeqaqva aqeqaqkeqe qaqvaaqeqa qkeqeqaqaa aqaq
//
LOCUS       WP_235907500             269 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Brucella anthropi].
ACCESSION   WP_235907500
VERSION     WP_235907500.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13407.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..269
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=29698
     Region          1..264
                     /region_name="PBP1_FruR"
                     /note="ligand binding domain of DNA transcription
                     repressor specific for fructose (FruR) and its close
                     homologs; cd06274"
                     /db_xref="CDD:380498"
     Site            order(8..9,15..16,19..20,22..23,26,31,33..36,54,193,196,
                     200,220,223..225)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:380498"
     Site            order(11,13..14,39,85..86,136,161,187..189,215..216,233,
                     261)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:380498"
ORIGIN      
        1 migmilpmld nryfssmaas fetvarsrnl ipvvastlrd pqqerstvet liahnvdall
       61 iagatdpdsv aelcekahlk hinvdlpgkh gasvisdnyd garvlthqia srrshrtens
      121 fyfiggvdsd hntrarvrgy kdelaalnfp vhsdaiitng ygpdaaarti rdiynklngl
      181 pealfvnsts pfegvvsflk tlpvdevrec sigcfdwdpf ievlhfpvvm vrqnvqamie
      241 rafelldesv qtnnppemip teliiprgl
//
LOCUS       WP_235907506              67 aa            linear   BCT 02-MAR-2025
DEFINITION  type II toxin-antitoxin system HicB family antitoxin [Brucella
            anthropi].
ACCESSION   WP_235907506
VERSION     WP_235907506.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 67)
  AUTHORS   Winter,A.J., Williams,C., Isupov,M.N., Crocker,H., Gromova,M.,
            Marsh,P., Wilkinson,O.J., Dillingham,M.S., Harmer,N.J.,
            Titball,R.W. and Crump,M.P.
  TITLE     The molecular basis of protein toxin HicA-dependent binding of the
            protein antitoxin HicB to DNA
  JOURNAL   J Biol Chem 293 (50), 19429-19440 (2018)
   PUBMED   30337369
REFERENCE   2  (residues 1 to 67)
  AUTHORS   Hall,A.M., Gollan,B. and Helaine,S.
  TITLE     Toxin-antitoxin systems: reversible toxicity
  JOURNAL   Curr Opin Microbiol 36, 102-110 (2017)
   PUBMED   28279904
REFERENCE   3  (residues 1 to 67)
  AUTHORS   Bibi-Triki,S., Li de la Sierra-Gallay,I., Lazar,N., Leroy,A., Van
            Tilbeurgh,H., Sebbane,F. and Pradel,E.
  TITLE     Functional and structural analysis of HicA3-HicB3, a novel
            toxin-antitoxin system of Yersinia pestis
  JOURNAL   J Bacteriol 196 (21), 3712-3723 (2014)
   PUBMED   25112480
REFERENCE   4  (residues 1 to 67)
  AUTHORS   Makarova,K.S., Grishin,N.V. and Koonin,E.V.
  TITLE     The HicAB cassette, a putative novel, RNA-targeting toxin-antitoxin
            system in archaea and bacteria
  JOURNAL   Bioinformatics 22 (21), 2581-2584 (2006)
   PUBMED   16895922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10003996
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..67
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /GO_component="GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA]"
                     /calculated_mol_wt=7193
     Region          6..60
                     /region_name="HicB"
                     /note="Antitoxin component HicB of the HicAB
                     toxin-antitoxin system [Defense mechanisms]; COG1598"
                     /db_xref="CDD:441206"
ORIGIN      
        1 msfapilsre gndgfiarvp dlpgcmsdgd tpeeavrnay daieawieaa edhgrkvppp
       61 arsiekr
//
LOCUS       WP_235907550             233 aa            linear   BCT 02-MAR-2025
DEFINITION  DDE-type integrase/transposase/recombinase [Siccirubricoccus
            phaeus].
ACCESSION   WP_235907550
VERSION     WP_235907550.1
KEYWORDS    RefSeq.
SOURCE      Siccirubricoccus phaeus
  ORGANISM  Siccirubricoccus phaeus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Siccirubricoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024997.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13610.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Siccirubricoccus phaeus"
                     /db_xref="taxon:2595053"
     Protein         1..233
                     /product="DDE-type integrase/transposase/recombinase"
                     /calculated_mol_wt=26086
     Region          8..218
                     /region_name="Rve"
                     /note="Transposase (or an inactivated derivative), DDE
                     domain [Mobilome: prophages, transposons]; COG3316"
                     /db_xref="CDD:442545"
ORIGIN      
        1 mkperttyrg yrfpaeiihh avwlyhvfsl slrdvelila krgswsrtgp saagawcsar
       61 tssrsyagdg rgratpgtst rsssgspagc ttsgapstim ascsipglpe csaakrffkr
      121 llhgvrykpk rlvtdglrsy gvarreelpr vkhrpaatrt nraenshrpt rrrerqkqgv
      181 ksaeqaqrll sahafiyghf rplrhlmmgg phrrtrdkvf riwrretcah laa
//
LOCUS       WP_235907576             785 aa            linear   BCT 02-MAR-2025
DEFINITION  heavy metal translocating P-type ATPase metal-binding
            domain-containing protein [Siccirubricoccus phaeus].
ACCESSION   WP_235907576
VERSION     WP_235907576.1
KEYWORDS    RefSeq.
SOURCE      Siccirubricoccus phaeus
  ORGANISM  Siccirubricoccus phaeus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Siccirubricoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023578.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12156.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Siccirubricoccus phaeus"
                     /db_xref="taxon:2595053"
     Protein         1..785
                     /product="heavy metal translocating P-type ATPase
                     metal-binding domain-containing protein"
                     /calculated_mol_wt=80059
     Region          19..>72
                     /region_name="ATPase-cat_bd"
                     /note="Putative metal-binding domain of cation transport
                     ATPase; pfam12156"
                     /db_xref="CDD:463475"
     Region          91..>134
                     /region_name="HMA"
                     /note="Heavy-metal-associated domain; pfam00403"
                     /db_xref="CDD:459804"
     Region          178..780
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     Site            order(505..509,632..633,660,678..679,682..683)
                     /site_type="active"
                     /db_xref="CDD:319763"
ORIGIN      
        1 mtmqpatltp adpglsaaac ahcgapvppg agrfccagce gaaalisglg ldafyrrrea
       61 aagaqkptel ppvdwaarav pgregthsld lmlhgltcga cvwlveqala aepdvtrara
      121 sltarrlsit wqgpaaraea lallvarlgf qvapwsaacl kaaedgegra llralgiaaf
      181 gatnvmmlsv avwagsdmge atrallhwla alvalpvvlv aglpfyrsaw aglragrvnm
      241 dfavslgvla ttamslseal rngpytwfdg atallflllg grvldraarq rarqagaell
      301 alqsaevtrl aadgraerlg aeavrpgdrl lvapgerlal dgvleageal ldtasstges
      361 lprrfaagea lpagavnlga aftqlvtaaa segslaqlar llsqaeqarg ryvaiadraa
      421 awyvpavhav alatflgwwl wvgvswqaal vpavaalivt cpcglaiavp avqvvavgal
      481 frrgvlvtsa talerlaecd havldktgtl tlgapallpd prrpagalaa aaalaassrh
      541 plarallrac peavpamgve evpgaglrrg rerlgsaafc glpgradglt lywrkdetaa
      601 piafrfaerl rpdaaaavaa lhqlglttel lsgdaapava eaatllgipd wragvtpagk
      661 aarltallae grkplmlgdg lndaaalala hasaspagat dlaqtaadlv lraeglaalp
      721 aaiatarraq aaarqnigfs liynlvavpa avlglvtpli aalvmasssl ivilnalklg
      781 reatr
//
LOCUS       WP_235907600             101 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3649 domain-containing protein [Siccirubricoccus phaeus].
ACCESSION   WP_235907600
VERSION     WP_235907600.1
KEYWORDS    RefSeq.
SOURCE      Siccirubricoccus phaeus
  ORGANISM  Siccirubricoccus phaeus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Siccirubricoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023783.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12365.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Siccirubricoccus phaeus"
                     /db_xref="taxon:2595053"
     Protein         1..101
                     /product="DUF3649 domain-containing protein"
                     /calculated_mol_wt=10527
ORIGIN      
        1 mnalqrawqg frawrwpgvl srtlaavvgg yavgalvsva calllpmpra eavltgmmls
       61 faayagavlw afaarsawra wagillpall laaaswagrv t
//
LOCUS       WP_235907692              65 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Siccirubricoccus
            phaeus].
ACCESSION   WP_235907692
VERSION     WP_235907692.1
KEYWORDS    RefSeq.
SOURCE      Siccirubricoccus phaeus
  ORGANISM  Siccirubricoccus phaeus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Siccirubricoccus.
REFERENCE   1  (residues 1 to 65)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 65)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Siccirubricoccus phaeus"
                     /db_xref="taxon:2595053"
     Protein         1..65
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=6786
     Region          1..>36
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mivlvtgaga gvghsiarrf aadgaraiaa gmrrgrrwrh psrnangqqv mpvarsdgph
       61 rvhhg
//
LOCUS       WP_235907716             712 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Siccirubricoccus phaeus].
ACCESSION   WP_235907716
VERSION     WP_235907716.1
KEYWORDS    RefSeq.
SOURCE      Siccirubricoccus phaeus
  ORGANISM  Siccirubricoccus phaeus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Siccirubricoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024872.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13481.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Siccirubricoccus phaeus"
                     /db_xref="taxon:2595053"
     Protein         1..712
                     /product="AAA family ATPase"
                     /calculated_mol_wt=75578
     Region          7..161
                     /region_name="Prim-Pol"
                     /note="Bifunctional DNA primase/polymerase, N-terminal;
                     pfam09250"
                     /db_xref="CDD:430484"
     Site            order(35,75,77,108,128)
                     /site_type="active"
                     /note="polymerase nucleotide-binding site [active]"
                     /db_xref="CDD:240129"
     Site            order(36,40,135,141)
                     /site_type="DNA binding"
                     /note="DNA-binding residues [nucleotide binding]"
                     /db_xref="CDD:240129"
     Site            order(65,75,77,102,105..106,108,128,135)
                     /site_type="other"
                     /note="nucleotide binding site [chemical binding]"
                     /db_xref="CDD:240129"
     Site            order(75,77,108,128)
                     /site_type="other"
                     /note="primase nucleotide-binding site [nucleotide
                     binding]"
                     /db_xref="CDD:240129"
     Region          316..621
                     /region_name="RepA"
                     /note="RecA-family ATPase [Replication, recombination and
                     repair]; COG3598"
                     /db_xref="CDD:442817"
ORIGIN      
        1 mskedaavaw arrgfrvfpc lpdepgregn akrakkptwe gwtewattde atirawwkgh
       61 dwnigvlttd mvavdidtkp grdgmaswmq vyggfdtltv rtpsgglhly ytganvalnq
      121 galgagldir shhgyvlapg stidgvpyrv eidqpmaqap revvlrckpp geraanaqha
      181 lvdldtpaai haavsivnda paaiegerse aayrlacrvr dhgvseamcr himapwgers
      241 avvgddlhmr ignayayaqn asgakhpdvl fsgitvpepp slispdalaa ervasarsrf
      301 kletladcea eedgayivkg alapgsvncv ygppnsgksv fashlamcva qgreffgrkv
      361 tatrtlyias enprsirrrl ralrqqhgdt sdllligatp dlfnasgdae aitqivqdeg
      421 iglvvldvla dafpgmdens ntgmgrvvqv akmwaatgaa vilvhhvakd hggtprghgs
      481 llgaldwgvl vepdaetgtv sakwwgggsg gkirdgagaa vqfrnevvpl gkdrdgerit
      541 tvvcremtaa eiraerdaqi kgnpakvhae avrlalslrt pnaapgdplp sipcdtlkea
      601 ctaargvlda etdkgrsray rtavatleak grlyrepgte rfivygwgdg dpvefnsrpd
      661 vrdarlamen pgaavvsqah acaivgsmrg gaglkvadfg ivsiptppsa ph
//
LOCUS       WP_235907397             192 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: YkoF family thiamine/hydroxymethylpyrimidine-binding
            protein [Priestia].
ACCESSION   WP_235907397
VERSION     WP_235907397.1
KEYWORDS    RefSeq.
SOURCE      Priestia
  ORGANISM  Priestia
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 192)
  AUTHORS   Devedjiev,Y., Surendranath,Y., Derewenda,U., Gabrys,A.,
            Cooper,D.R., Zhang,R.G., Lezondra,L., Joachimiak,A. and
            Derewenda,Z.S.
  TITLE     The structure and ligand binding properties of the B. subtilis YkoF
            gene product, a member of a novel family of thiamin/HMP-binding
            proteins
  JOURNAL   J Mol Biol 343 (2), 395-406 (2004)
   PUBMED   15451668
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019246.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07615.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Priestia"
                     /db_xref="taxon:2800373"
     Protein         1..192
                     /product="YkoF family
                     thiamine/hydroxymethylpyrimidine-binding protein"
                     /calculated_mol_wt=21343
     Region          9..83
                     /region_name="Thiamine_BP"
                     /note="Thiamine-binding protein; cl00307"
                     /db_xref="CDD:444822"
     Region          115..189
                     /region_name="Thiamine_BP"
                     /note="Thiamine-binding protein; cl00307"
                     /db_xref="CDD:444822"
ORIGIN      
        1 minlekinvg crftlsvmsd nfidiilsal nevdmskvqr ktdrvstfie gtakdvfevv
       61 qaiyksagks ekhivlnatf stgrheeyfe erkinskenm plnqqlcasf pvstqfslyp
      121 ldtphyvdii ksgigavkqq gvfaetvpfa talegdvdkv faslyecfmk svqqarvvmt
      181 vnmsahspss kr
//
LOCUS       WP_235907832             413 aa            linear   BCT 02-MAR-2025
DEFINITION  ubiquitin-activating E1 FCCH domain-containing protein
            [Siccirubricoccus phaeus].
ACCESSION   WP_235907832
VERSION     WP_235907832.1
KEYWORDS    RefSeq.
SOURCE      Siccirubricoccus phaeus
  ORGANISM  Siccirubricoccus phaeus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Siccirubricoccus.
REFERENCE   1  (residues 1 to 413)
  AUTHORS   Lee,I. and Schindelin,H.
  TITLE     Structural insights into E1-catalyzed ubiquitin activation and
            transfer to conjugating enzymes
  JOURNAL   Cell 134 (2), 268-278 (2008)
   PUBMED   18662542
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027516.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16190.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Siccirubricoccus phaeus"
                     /db_xref="taxon:2595053"
     Protein         1..413
                     /product="ubiquitin-activating E1 FCCH domain-containing
                     protein"
                     /calculated_mol_wt=42357
     Region          <76..152
                     /region_name="PRK13920"
                     /note="putative anti-sigmaE protein; Provisional"
                     /db_xref="CDD:237558"
ORIGIN      
        1 mtagaydwtd dmlkiksmqk kfrdsfngte inptrwdvaa sgsgmaltva dgtvtistgt
       61 tlddevvlts rtaftiplrv mvavnlsqri agqsvwlelv svdptsaqpd grsaaawrld
      121 gtsptlanye vqsegaprla sssgspiptt vptgwsvlei eptndecwfh grqldttaar
      181 snsyvrhqqi pepnalyrfr irvrnrqfin gisavanngs glvritraah gfatndvvtv
      241 advsgvpgan gtftitvida nsfdlvgstf sgaylntgwa svsrnlapas mrsrsarcas
      301 artasrsgga aarvdsdgaa gaglgvvvtv iswgglggad gagaagvsgv vsgmmgsssg
      361 ragsiagagr pcsprartaa srstgtgtte iskgsqstar wtvspvatsg rgs
//
LOCUS       WP_235907857             166 aa            linear   BCT 02-MAR-2025
DEFINITION  chemotaxis protein CheW [Siccirubricoccus phaeus].
ACCESSION   WP_235907857
VERSION     WP_235907857.1
KEYWORDS    RefSeq.
SOURCE      Siccirubricoccus phaeus
  ORGANISM  Siccirubricoccus phaeus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Siccirubricoccus.
REFERENCE   1  (residues 1 to 166)
  AUTHORS   Bilwes,A.M., Alex,L.A., Crane,B.R. and Simon,M.I.
  TITLE     Structure of CheA, a signal-transducing histidine kinase
  JOURNAL   Cell 96 (1), 131-141 (1999)
   PUBMED   9989504
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013731.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01584.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Siccirubricoccus phaeus"
                     /db_xref="taxon:2595053"
     Protein         1..166
                     /product="chemotaxis protein CheW"
                     /GO_process="GO:0006935 - chemotaxis [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=17450
     Region          28..163
                     /region_name="CheW_like"
                     /note="CheW-like domain. CheW proteins are part of the
                     chemotaxis signalling mechanism in bacteria. CheW
                     interacts with the methyl accepting chemotaxis proteins
                     (MCPs) and relays signals to CheY, which affects flageller
                     rotation. This family includes CheW and...; cl00256"
                     /db_xref="CDD:469692"
ORIGIN      
        1 mqqamtgaaa gtakppgaas plgdataesy ltltvadqlc gvpvlavrdv lgaqtitrip
       61 lappevagsl nlrgrivtai dlrrrlglpp rkpedgqams vvverdnely slladqvgdv
      121 lplpradrap npptldpmwr evsggvhrmg erllilldve rilaig
//
LOCUS       WP_235907988             102 aa            linear   BCT 02-MAR-2025
DEFINITION  isoaspartyl peptidase/L-asparaginase, partial [Brucella lupini].
ACCESSION   WP_235907988
VERSION     WP_235907988.1
KEYWORDS    RefSeq.
SOURCE      Brucella lupini (Ochrobactrum lupini)
  ORGANISM  Brucella lupini
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013292.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01112.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Brucella lupini"
                     /db_xref="taxon:255457"
     Protein         1..>102
                     /product="isoaspartyl peptidase/L-asparaginase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
     Region          <25..>95
                     /region_name="IaaA"
                     /note="Isoaspartyl peptidase or L-asparaginase,
                     Ntn-hydrolase superfamily [Amino acid transport and
                     metabolism]; COG1446"
                     /db_xref="CDD:441055"
ORIGIN      
        1 mpcydvpath rhgkgclhvi llpfrrracg aisgicgprn pvlaaravme qtehvffage
       61 gakrfceaag lemmapewfs teqrrkalhd emarrrsgaa dd
//
LOCUS       WP_235908020              37 aa            linear   BCT 02-MAR-2025
DEFINITION  hydantoinase/oxoprolinase family protein, partial [Brucella
            lupini].
ACCESSION   WP_235908020
VERSION     WP_235908020.1
KEYWORDS    RefSeq.
SOURCE      Brucella lupini (Ochrobactrum lupini)
  ORGANISM  Brucella lupini
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 37)
  AUTHORS   Ye,G.J., Breslow,E.B. and Meister,A.
  TITLE     The amino acid sequence of rat kidney 5-oxo-L-prolinase determined
            by cDNA cloning
  JOURNAL   J Biol Chem 271 (50), 32293-32300 (1996)
   PUBMED   8943290
  REMARK    Erratum:[J Biol Chem 1997 Feb 14;272(7):4646. Guo-jie GE [corrected
            to Ye GJ]]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014071.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01968.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..37
                     /organism="Brucella lupini"
                     /db_xref="taxon:255457"
     Protein         1..>37
                     /product="hydantoinase/oxoprolinase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
     Region          <2..>36
                     /region_name="HyuA"
                     /note="N-methylhydantoinase A/oxoprolinase/acetone
                     carboxylase, beta subunit [Amino acid transport and
                     metabolism, Secondary metabolites biosynthesis, transport
                     and catabolism]; COG0145"
                     /db_xref="CDD:439915"
ORIGIN      
        1 mtryalncfg gaggqhaclv adalgmknil lhpmsgl
//
LOCUS       WP_235908203             397 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Aeromicrobium yanjiei].
ACCESSION   WP_235908203
VERSION     WP_235908203.1
KEYWORDS    RefSeq.
SOURCE      Aeromicrobium yanjiei
  ORGANISM  Aeromicrobium yanjiei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Aeromicrobium.
REFERENCE   1  (residues 1 to 397)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 397)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 397)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Aeromicrobium yanjiei"
                     /db_xref="taxon:2662028"
     Protein         1..397
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=42910
     Region          11..379
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(88,118,120,151,153,361..363,365,367)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 middksapml eelvrqrlet llsghppast dvrdflgaqf dlglawvsyp egrgglgapq
       61 elqslidrtl sdagaphpft vnpigygmaa ptllafaapd dldqklrpll tgeevwcqlf
      121 sepsagsdva glstravrdg dewvvtgqkv wtslahratw glllartdpt vpkhagltyf
      181 fidmhapgve vrplrqatgd aefnevffte lripdssrlg avgegwkvai ttlmnervai
      241 ggrmtprgqg pigeavalwq eagrpeqlkd rlmglwvrse vlrltnvrar elakaggtag
      301 pegstaklla gelnqdvyef cvellgpaga lypetyemsg gadgarrdvr ygflrsqant
      361 ieggtsevmr nilgervlgl ppeprvdkdv pfneigr
//
LOCUS       WP_235908306             557 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6798 domain-containing protein [Roseiconus nitratireducens].
ACCESSION   WP_235908306
VERSION     WP_235908306.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042614.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20604.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..557
                     /product="DUF6798 domain-containing protein"
                     /calculated_mol_wt=61552
     Region          435..494
                     /region_name="DUF6798"
                     /note="Domain of unknown function (DUF6798); pfam20604"
                     /db_xref="CDD:466753"
ORIGIN      
        1 mpapssases vaspvswgac aewgaliavf flyagdpvpa vneahylvka knfwdpawcs
       61 ndllaasgka hvtyyvtfgw ltrfcslatt awigrlvgwa lialglqrcc ralrlprfys
      121 lgvavlwiag veygnlagew viggieakvp ayglvligms evmrrhwsra wvwfgaasaf
      181 hvltggwavv aaifsflvce rwlrpkevpp kpfftwglwv ggalsllgla pailltmsat
      241 paesvlaaki ytyvrlrhhl lpsdfpwswy lrhgvlvgml lvwmgadrkl larrpaewma
      301 lgavliaggg llvgtlqpth pdltarllry ywfrltdalv plvvafivmq klagvkgspv
      361 gaeavvpdra aktggggrtp vavgaaaltl lfglglfgws slqrvrlglp pstshrllgi
      421 hpeagiaeqh rshadwvavc dwvrvamped evfltprhqq tfkwyaerae vvnwkevpqd
      481 avallewrrr feeifperlg ttrvsiqyti lreirqryga rfmvvdrrvt gqqlplvkvy
      541 pvgsqtnaty avyelpy
//
LOCUS       WP_235908367             376 aa            linear   BCT 02-MAR-2025
DEFINITION  alkaline phosphatase family protein [Roseiconus nitratireducens].
ACCESSION   WP_235908367
VERSION     WP_235908367.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
REFERENCE   1  (residues 1 to 376)
  AUTHORS   Jin-Hua,P., Goding,J.W., Nakamura,H. and Sano,K.
  TITLE     Molecular cloning and chromosomal localization of PD-Ibeta (PDNP3),
            a new member of the human phosphodiesterase I genes
  JOURNAL   Genomics 45 (2), 412-415 (1997)
   PUBMED   9344668
REFERENCE   2  (residues 1 to 376)
  AUTHORS   Peiffer,W.E., Desrosiers,M.G. and Menick,D.R.
  TITLE     Cloning and expression of the unique Ca2+-ATPase from
            Flavobacterium odoratum
  JOURNAL   J Biol Chem 271 (9), 5095-5100 (1996)
   PUBMED   8617788
REFERENCE   3  (residues 1 to 376)
  AUTHORS   Deissler,H., Lottspeich,F. and Rajewsky,M.F.
  TITLE     Affinity purification and cDNA cloning of rat neural
            differentiation and tumor cell surface antigen gp130RB13-6 reveals
            relationship to human and murine PC-1
  JOURNAL   J Biol Chem 270 (17), 9849-9855 (1995)
   PUBMED   7730366
REFERENCE   4  (residues 1 to 376)
  AUTHORS   Murata,J., Lee,H.Y., Clair,T., Krutzsch,H.C., Arestad,A.A.,
            Sobel,M.E., Liotta,L.A. and Stracke,M.L.
  TITLE     cDNA cloning of the human tumor motility-stimulating protein,
            autotaxin, reveals a homology with phosphodiesterases
  JOURNAL   J Biol Chem 269 (48), 30479-30484 (1994)
   PUBMED   7982964
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01663.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..376
                     /product="alkaline phosphatase family protein"
                     /calculated_mol_wt=40854
     Region          57..>275
                     /region_name="AtaC"
                     /note="c-di-AMP phosphodiesterase AtaC or nucleotide
                     pyrophosphatase, AlkP superfamily [Signal transduction
                     mechanisms]; COG1524"
                     /db_xref="CDD:441133"
     Region          <323..348
                     /region_name="DUF4983"
                     /note="Domain of unknown function (DUF4983); pfam16356"
                     /db_xref="CDD:374498"
ORIGIN      
        1 mrskvirlic prftkltiak aipriqlatf llmgllliag asaaqeavse sasgktrdga
       61 avpprrvlvi gidgtrtdal qaantphldr liqdgqlwtn tqilgdrptq ndtvsgpgwt
      121 sfltgvwadk hgvndnrfeg rnvdayphff arvrhaypaa rmgsfvdwkp iddylvrdad
      181 vrvcheshga seyeqndgkl ataaaaflrd ddphvvmvyf gmadesghah gfhpsvrpyv
      241 daiarvderv gqvlnamqer pnyaqeqwlv vvstdhggqg tghgsgheip airqtwlivs
      301 gdrrspnppa ssvatsteps psylvdvsvt alehlgipld pawqldgkal rfdspphppa
      361 adepvshsrk alsene
//
LOCUS       WP_235908385             524 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase [Roseiconus nitratireducens].
ACCESSION   WP_235908385
VERSION     WP_235908385.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
REFERENCE   1  (residues 1 to 524)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..524
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=57822
     Region          50..482
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
     Site            order(58,103,256,335..336)
                     /site_type="active"
                     /db_xref="CDD:293732"
     Site            order(58,103,256,336)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293732"
ORIGIN      
        1 mvqglstsvi daitpslawa mnriiqiava lccfavgshp thaggndtrp nillilcddl
       61 gyadvgfnae lfgvrtevvt pnidaiakag mvfrqayvah pfcgpsrmgl msgrmphcfg
      121 gqknlpdvak nledyndkgi pqsetlistl lqrsgyrtgc igkwhmgdak pfrpcargfd
      181 hffgflgggh hyfpsvtdkt hpkvndyqyl lrrsddtvls pdgeyltdmf seeavsfitq
      241 qsdepfflyl aynaphsplq gkaedllhlf pnhqpsnpan gidfhdyskr qnyvamvyav
      301 drgigqiana lrdpnrdged sdsimestli vflsdnggki lqagnnapls ddkgsthegg
      361 irvpmfmhwp raitagsvfn dpilamdlyp tfaglaqttv paekvldgkd iwndiqsgtn
      421 phaeefipwl rhhgsgneva irkgdmkayr kmggkwqihn ivddpgettn vadqnadllr
      481 elvsagyaws ktlqdprwhd taasleswie nqmpgyhstf qihr
//
LOCUS       WP_235908392             686 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma 54-interacting transcriptional regulator [Roseiconus
            nitratireducens].
ACCESSION   WP_235908392
VERSION     WP_235908392.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
REFERENCE   1  (residues 1 to 686)
  AUTHORS   Studholme,D.J. and Dixon,R.
  TITLE     Domain architectures of sigma54-dependent transcriptional
            activators
  JOURNAL   J Bacteriol 185 (6), 1757-1767 (2003)
   PUBMED   12618438
REFERENCE   2  (residues 1 to 686)
  AUTHORS   Chaney,M., Grande,R., Wigneshweraraj,S.R., Cannon,W., Casaz,P.,
            Gallegos,M.T., Schumacher,J., Jones,S., Elderkin,S., Dago,A.E.,
            Morett,E. and Buck,M.
  TITLE     Binding of transcriptional activators to sigma 54 in the presence
            of the transition state analog ADP-aluminum fluoride: insights into
            activator mechanochemical action
  JOURNAL   Genes Dev 15 (17), 2282-2294 (2001)
   PUBMED   11544185
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00158.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..686
                     /product="sigma 54-interacting transcriptional regulator"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008134 - transcription factor binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=73752
     Region          15..109
                     /region_name="FHA"
                     /note="Forkhead associated (FHA) domain, binds pSer, pThr,
                     pTyr [Signal transduction mechanisms]; COG1716"
                     /db_xref="CDD:441322"
     Region          194..345
                     /region_name="GAF"
                     /note="Domain present in phytochromes and cGMP-specific
                     phosphodiesterases; smart00065"
                     /db_xref="CDD:214500"
     Region          <339..681
                     /region_name="RocR"
                     /note="RocR-type transcriptional regulator, contains PAS,
                     AAA-type ATPase, and DNA-binding Fis domains
                     [Transcription, Signal transduction mechanisms]; COG3829"
                     /db_xref="CDD:443041"
ORIGIN      
        1 msdstlstps ttersgylvl qsagrwsdvf rltapmevil grsssnaiai rsekasrqha
       61 riwstpdgwq iedlgsrngt vvggqkidap vvlrdgdwie iagfsiqfvh hlasaegpad
      121 spqpagated qltlamdavs itdrrsesgy lhggavfgkd gsqqdrlvrg deasavllql
      181 aftlagadsa skaielvldr msetircrsv gaylleadpg rksahaavdp skmrlvatrq
      241 aadaplgsts yrrpadaaia sviapggqai larnvagdrd latensrgei davsmilapv
      301 rgrdgqllgm lhllttdada vlsaadlefv lavaeilaes lrnlrdrgkl drslrrsqrq
      361 ietlkqqlgg ktaivgnsda ikdvirnvsl agpteatvli rgesgvgkel vasaihqasa
      421 rsagplvcmn caalspslle selfghekga ftgaterkrg kfemadggtl mldeigemdl
      481 eiqakflrvl eghpfervgg qtpikvdvrv vaatnrdlqs mvgegkfrqd lfyrlhvvei
      541 fvpplrergs dvlllakhfl nefnqqmgrr ietisdracq klldyqwpgn irelrnvier
      601 avvlnsgsti eaehllltpa avgglggsra atsrdpvems ladlerahiq rvlrhtdgnk
      661 sraasilgie rstldrklkr faksta
//
LOCUS       WP_235908394             693 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1592 domain-containing protein [Roseiconus nitratireducens].
ACCESSION   WP_235908394
VERSION     WP_235908394.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019259.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07631.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..693
                     /product="DUF1592 domain-containing protein"
                     /calculated_mol_wt=78461
     Region          123..227
                     /region_name="PSD3"
                     /note="Protein of unknown function (DUF1587); pfam07626"
                     /db_xref="CDD:429563"
     Region          259..319
                     /region_name="PSD5"
                     /note="Protein of unknown function (DUF1595); pfam07637"
                     /db_xref="CDD:429569"
     Region          330..449
                     /region_name="PSD4"
                     /note="Protein of unknown function (DUF1592); pfam07631"
                     /db_xref="CDD:429565"
     Region          491..590
                     /region_name="PSCyt3"
                     /note="Protein of unknown function (DUF1588); pfam07627"
                     /db_xref="CDD:429564"
     Region          607..677
                     /region_name="PSD2"
                     /note="Protein of unknown function (DUF1585); pfam07624"
                     /db_xref="CDD:429562"
ORIGIN      
        1 misrflfiai clvvatqrgv avddagdslr atlqqhcvqc hgqdgevngd vnlltmtwqn
       61 gkasareael fddlirvieh remppedasq lssvqrtmll qtlrealhqs lsdqaersqa
      121 pirrlnrfqy nnavvdlfql dcvvftlpek mvrvhrdyfr petgvmadtv vvgsrplgks
      181 qlieprlagv amfpqdlrae hgfdnqadhl slspllmesf lklsqsitqs pdftprrvgi
      241 wndffappsa gqdeidvivr drmqwflgra frrkvsdell nrytsfvirq ihrgvpftda
      301 mkavaaaaia spnflylydg gtreqetspl tdfelasrls fflwgslpdk elsdlasagk
      361 lqdanvlsgq vdrmlrdrki krfcdsfpaq wlqldriiss lpdpeqfpef yfakyrdsmh
      421 mmveplllfe tvlienqsit qfidsdftyr slllreayre eipaevrknr hsgevttltf
      481 drlpvndrry gglitnaavm tmtsgpnrtq pitrgawlas vifndppdpp padvpplpek
      541 ppggeeqltl rerlsahrer adcrgcheqi dplgfaleny npigvwrdsy qngrdvdmsg
      601 vlfqkhafgd viefkdaila ekdrfargfs ghvlsfalar rldasdraav dliaqetaad
      661 dyriqtlikh vvlsepfrrk ytpqsephsd vsd
//
LOCUS       WP_235908425            1324 aa            linear   BCT 02-MAR-2025
DEFINITION  HEAT repeat domain-containing protein [Roseiconus nitratireducens].
ACCESSION   WP_235908425
VERSION     WP_235908425.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025030.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13646.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1324
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..1324
                     /product="HEAT repeat domain-containing protein"
                     /calculated_mol_wt=145703
     Region          91..>133
                     /region_name="Bgal_small_N"
                     /note="Beta galactosidase small chain; cl46900"
                     /db_xref="CDD:481240"
     Region          259..611
                     /region_name="YliI"
                     /note="Glucose/arabinose dehydrogenase, beta-propeller
                     fold [Carbohydrate transport and metabolism]; COG2133"
                     /db_xref="CDD:441736"
     Region          703..831
                     /region_name="HEAT"
                     /note="HEAT repeat [General function prediction only];
                     COG1413"
                     /db_xref="CDD:441023"
     Region          703..763
                     /region_name="HEAT_2"
                     /note="HEAT repeats; pfam13646"
                     /db_xref="CDD:433376"
     Region          1181..1312
                     /region_name="CxxCH_TIGR02603"
                     /note="putative heme-binding domain,
                     Pirellula/Verrucomicrobium type; TIGR02603"
                     /db_xref="CDD:274224"
ORIGIN      
        1 mdgkrfdkra lfsvrrgthr sryfsirsll agsavfiltm aaakpssgde aewiwatnts
       61 aeqsipvgqr cffrkpinlr vpalakieia addeyqlfin ghavgvgkss rqvdeydvge
      121 yfevgrniva ievtnrrgdt aalaarvsvr pensdkwytf stnpswkttt epselwetvv
      181 fndrlwgsas sfgplgdtvp wdrtgppetp apeamadapp tdhpqdgksi vandapspsp
      241 qnasadtsgq rerfqiqkgf gvqrvlgddk vgsviamtfn efghllisqe ngplllaydd
      301 ngdgipetvr tycelvkscq gilalngdvf vtadgpegaa lyklvdadrn gtlekataiv
      361 kfvdwknrpa qpgehgahgl rlgpdgmiyv algshvqavg evgdgqtyrd pyegdllpry
      421 edpgghgrgv kapggtivrt npegsvverv agglrnpydi vfhsggamfv hdadmesdvd
      481 tawyrpnaif dvteagefgw rsgwakwpsy yldrlpdmld tgrgsptggv cyehfafpir
      541 yqntlfmadw segrilnvri kpsaasfdad sevflqgqpl nvtdlevgpe galyfctggr
      601 dtaggiyrvi ykgeipermt klgtgiaeav rqpqiesawt rqkiasikad lgdqwnrlva
      661 gvaysddnpp dyrvramtlm qlfgpvpsee lllelseaes elvrakaasm lgrnpgpegk
      721 rrlialledn dpavqraace amlrgnltpd dtaalleilk ssdrtlafvg ckllqrmpva
      781 tyrdqvvdae dtrvaivgml alvsadptea nalavlaras emmsgflsda dfidllrlcq
      841 valhrsgvda ekvaalgdqi aeefpagepr inhevirlat ylraesladr alrylesdap
      901 lesrtlvamc lqsmsegwta kqrfvilkff ektanrstsg alpmymtnvt rdfasvlskd
      961 dlhaileqgh vwqnaalaai ykidrpidkk ttgtlmeldr rlqeqtevrd vqrrlrtgii
     1021 allasseeae asdylrqlwr depqrrsvis malsvhpegd nwdylvrsln ivdadaaeev
     1081 vralrkvpva tddpmalrhl illgvraekd krafedvqrl lehwtgvehs aadqqsmrpw
     1141 qkwyskvypd rpaavlpkad qsrwdfeqlv gylesdkgrt gdpergkmay tkascaqchr
     1201 fgnygesigp dlsglarrft kreivesily pahvvsdqya skkvltldgk vlvgmvseqs
     1261 dgslivrdsr ndtsivgaed vdqilpntss impsglidel slqeisdmma ylgvvpaaei
     1321 aqrp
//
LOCUS       WP_235908472             271 aa            linear   BCT 02-MAR-2025
DEFINITION  NIPSNAP family protein [Roseiconus nitratireducens].
ACCESSION   WP_235908472
VERSION     WP_235908472.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
REFERENCE   1  (residues 1 to 271)
  AUTHORS   Seroussi,E., Pan,H.Q., Kedra,D., Roe,B.A. and Dumanski,J.P.
  TITLE     Characterization of the human NIPSNAP1 gene from 22q12: a member of
            a novel gene family
  JOURNAL   Gene 212 (1), 13-20 (1998)
   PUBMED   9661659
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019590.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07978.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..271
                     /product="NIPSNAP family protein"
                     /calculated_mol_wt=30076
     Region          167..270
                     /region_name="NIPSNAP"
                     /note="cl46801"
                     /db_xref="CDD:481141"
ORIGIN      
        1 midrssaail pvalallatf faglshaadp ekpmdkqyye vrtyqlkdas sakaldaylr
       61 dallpalgrq dvgpvgvfap aeptekdsse dsrvivvipy dspndlvrva sglrddsqfq
      121 qdaresigie pdqvpykrir sellvamdcm pklnvpagtl enqqrvyelr lyespnerlg
      181 dlkvdmfnng evpifldsgi qpvflgqcli gpqtpcliyl tvypddaarq kawdtfrnhp
      241 dwqvlkgvek ykgtvsridq dvlaakpysq m
//
LOCUS       WP_235908510            1358 aa            linear   BCT 02-MAR-2025
DEFINITION  secretin N-terminal domain-containing protein [Roseiconus
            nitratireducens].
ACCESSION   WP_235908510
VERSION     WP_235908510.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
REFERENCE   1  (residues 1 to 1358)
  AUTHORS   Yin,M., Yan,Z. and Li,X.
  TITLE     Structural insight into the assembly of the type II secretion
            system pilotin-secretin complex from enterotoxigenic Escherichia
            coli
  JOURNAL   Nat Microbiol 3 (5), 581-587 (2018)
   PUBMED   29632366
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015891.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03958.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1358
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..1358
                     /product="secretin N-terminal domain-containing protein"
                     /calculated_mol_wt=144377
     Region          <341..>515
                     /region_name="type_II_gspD"
                     /note="type II secretion system protein D; TIGR02517"
                     /db_xref="CDD:274175"
     Region          525..618
                     /region_name="Secretin_N"
                     /note="Bacterial type II/III secretion system short
                     domain; pfam03958"
                     /db_xref="CDD:461109"
     Region          624..712
                     /region_name="Secretin_N"
                     /note="Bacterial type II/III secretion system short
                     domain; pfam03958"
                     /db_xref="CDD:461109"
     Region          717..1088
                     /region_name="PulD"
                     /note="Type II secretory pathway component GspD/PulD
                     (secretin) [Intracellular trafficking, secretion, and
                     vesicular transport]; COG1450"
                     /db_xref="CDD:441059"
     Region          <1186..>1356
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
ORIGIN      
        1 mfathavaqt tgpsgrpgtp vriplhgpql qgpqiqgtqi pgtqvqgaqp tsqstgpqrs
       61 dlqrsasqrs smlhpsgpys tdeagalaqh dspqlrklav pamharsiat alslryrelp
      121 gvtispdvan eqlvvmapaq tqvaiatdlr aliagsvrqa stapsgpisv klqniswref
      181 erdlkqaagq evptttrnng nlvtfqmnva pmqgtlvevd rrqnevtvka pepvisgwkk
      241 migaldsvpn rydditrvhr leyaelapiq rtmrllrslk sptkdaageq gffrnavfqa
      301 dqdsapgdgg aeeamgpgee daegggvlgd vqiqyvpelg qiilkgatrd vnrvmeliqd
      361 ieakaeltqp dtevvpleya danavatllt qlyedvlssr qgdvsitsld spnallligr
      421 seaiaslkel iskidqpvde tsrlrvyrlq nasaldaqet irnfftnqpg ddeelrpglg
      481 prvrveadyr tnslivsaap rdmtevtrli neldvketaa tselkvfpln naiaedlaat
      541 lqdaftgnei tasedsssps tslsivaids nekrvidsgi lsgatitadt ganaivvrap
      601 sssmpligel irqldkapgi dslvkvftiq ngdasqltia letlfgsdaa ttgtavgagn
      661 laglppstaa gesslvplrf stdirtnsiv asgsaedlev vesillrlds egfaeritev
      721 iwlrnndall vaeaitnyvn qrqtsitviq qyqqglgpfd lldrdivaip evnsnsills
      781 vsprlyeevr rlidqldrrr pmvmikllla evaledsfei gtelglqdsl afsrgqavad
      841 vpgsaaagdp gfnfnnagvp nvndiardsl agstvstfgl gqsnpaigyg gfvlnaasds
      901 vsllfrtlqd asrlqilsrp vlmtadntea lvnvgrqiar frgstvtnnt vvqnidditv
      961 glilnirprv gadglitvdv ditrsardds ngtlvpdgqg gtilinditd ttaqstitvf
     1021 sgqtvimggl iqkerinssr rlphladipl lgnlfkydfe qelrrellvv mtpilvtggq
     1081 dleyikqees srmswcladv vemngdvgls ggyglwgpai gptiypdlqp tvdgevvvgn
     1141 ipqglmtdqm rpdvfsdgtg spyyphgvpq ggdlmygqpt dmmqapteap plqgvpvepa
     1201 pgsildrgfe ldeplppgai pqapplpgqg yptqhpgsms pprripgqfp tdplptgsgv
     1261 pgvpqetasp sdlygvpqge apqastmrpg lqpgsmqrga mqpgamqpga prtspipasy
     1321 lsdqdrmmlp aswiddaapr tsaaapssst grtpppgr
//
LOCUS       WP_235908521              84 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5989 family protein [Roseiconus nitratireducens].
ACCESSION   WP_235908521
VERSION     WP_235908521.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039953.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19451.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..84
                     /product="DUF5989 family protein"
                     /calculated_mol_wt=9394
     Region          37..84
                     /region_name="DUF5989"
                     /note="Family of unknown function (DUF5989); pfam19451"
                     /db_xref="CDD:466090"
ORIGIN      
        1 mstqpppdte rpldadesrt vdnsnpsiea laeqsdpgiv refiwflryn kkwwltpilv
       61 illalvalaf ftaspaapfi ytlf
//
LOCUS       WP_235908556             894 aa            linear   BCT 02-MAR-2025
DEFINITION  secretin N-terminal domain-containing protein [Roseiconus
            nitratireducens].
ACCESSION   WP_235908556
VERSION     WP_235908556.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
REFERENCE   1  (residues 1 to 894)
  AUTHORS   Yin,M., Yan,Z. and Li,X.
  TITLE     Structural insight into the assembly of the type II secretion
            system pilotin-secretin complex from enterotoxigenic Escherichia
            coli
  JOURNAL   Nat Microbiol 3 (5), 581-587 (2018)
   PUBMED   29632366
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015891.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03958.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..894
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..894
                     /product="secretin N-terminal domain-containing protein"
                     /calculated_mol_wt=96483
     Region          263..331
                     /region_name="Secretin_N"
                     /note="Bacterial type II/III secretion system short
                     domain; pfam03958"
                     /db_xref="CDD:461109"
     Region          405..476
                     /region_name="Secretin_N"
                     /note="Bacterial type II/III secretion system short
                     domain; pfam03958"
                     /db_xref="CDD:461109"
     Region          624..720
                     /region_name="Secretin_N"
                     /note="Bacterial type II/III secretion system short
                     domain; pfam03958"
                     /db_xref="CDD:461109"
ORIGIN      
        1 mnlsrqnlrh astrprasaw fatcfvalaf cvltatptra detaaseasg etapqatpaq
       61 tstepttaes sakssanmes avpdavdanp atvrfsfngv pwrevinwia eeaslalhvd
      121 avppgsftyt dpspftfdea idrinlfllp egyslvrsgn llsvinlsdp rslqqldala
      181 elvrpeelad rnaqdvvkcl fplgalkaqe avdelsainl mvtpavfekt nqlmvtdtva
      241 klrnvkavle sfepsaldng tvvksftleh vsaedvlvva rphlglatge migidvslss
      301 dlqgkhifvt giedkvklie rlvesidvpe psladtqgda kfqahkiagg nvelaydvlq
      361 tllagqdvrl sknqtagtvv alappkvqee iaatvaqlaa deaqfevisl gsvdpfvaig
      421 lieemldlta plddddddre arqapkidad panrrlfvrg tpeqveqirq iveglddkeq
      481 avasdanirl lsmrgkrale slalaarfwr kpnplvlfks dsaalkpnte rvvhegsdag
      541 qpseddllda fngnvpdhfv slhgrgqlle tpspdpsepa iecqltsrgl lvqcddprvl
      601 dqfedhlaml tggigspavs epitfylkyt epaealrmla elldggdvis estggslins
      661 vvssptssyl gpiltnrdgt lsliagtati vadprlnrli aqgttedidr ieeylriiek
      721 dnsitsveth grshvielvh traseveaal rkafagrvae aasstagggp rgggdrdrer
      781 drdrdddrsr dndrrddrqp parggaakgq ddepkmtlav hepsnslivt apdqlfeeve
      841 rlakvidgrg eqvvrvltps nsnvieevlq qvmlgqsasp srssrdrdrd rdrr
//
LOCUS       WP_235908601             311 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1207 domain-containing protein [Roseiconus nitratireducens].
ACCESSION   WP_235908601
VERSION     WP_235908601.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018439.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06727.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..311
                     /product="DUF1207 domain-containing protein"
                     /calculated_mol_wt=34609
     Region          <64..311
                     /region_name="DUF1207"
                     /note="Protein of unknown function (DUF1207); pfam06727"
                     /db_xref="CDD:310969"
ORIGIN      
        1 matvrlvlig witvraslsl taselptlfa esrmlidqvd adcdsicqal rsapaaelpy
       61 dwqllpdgll whsylaaphe prissllfht ndggsywdat lggrvgllry gtrganrprg
      121 lqwdlegavi trldllhaed vesmdyrfgt eitaaegawa mkfgyfhvss hvgdeylvrn
      181 hsferinyvt eswiiggsyr piesvrlyge fanafsvsgg aqryqyqtga eftpdpgstc
      241 rampfaainl nfreavdydv sttvqlgwcf qsslsgrrlr fgaqygdgpt sqyafftrre
      301 aslglgvwfd y
//
LOCUS       WP_235908640             801 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Roseiconus nitratireducens].
ACCESSION   WP_235908640
VERSION     WP_235908640.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024824.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13432.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..801
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=90246
     Region          <1..>45
                     /region_name="PknB_PASTA_kin"
                     /note="Stk1 family PASTA domain-containing Ser/Thr kinase;
                     NF033483"
                     /db_xref="CDD:468045"
     Region          76..>283
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          181..209
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(182,185..186,189..190,192,216,219..220,223..224,
                     226..227,255,258..259,262..263,266)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          196..413
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          214..249
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          254..282
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          288..314
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          319..349
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          354..382
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          388..413
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          440..>665
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          496..525
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(497,500..501,504..505,508,532,535..536,539..540,
                     542..543,568,571..572,575..576,579)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          530..560
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          656..>736
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          674..704
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          710..736
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mkaidkerer rygsaselad didrhlagqp vmacppstiy rtrklirrhr vallatsfvv
       61 asmvagtgfs iwysfqaksa qlraeksesl anqkhrllet eqrklreqqv llrlekdkla
      121 qaqqiseeny qlatdavtel idrvannkvl aypeladfrg elltsaeefy sqliardard
      181 hqlfllrarv rrnlhksada ladlknaesl apdskavhre laefyrmafd ywsrnptlal
      241 khakrlieid snsqagwytl awihrdgget dqaveamkha aelsddpyqr atrlgialfw
      301 egkfseaatq yqqaqpdgkm hllnrlgecy yemgelerav eifsksiqvn afhavapagr
      361 aaaklklgrh ldaaddwela ydidpndfwy lpkirdallk adthqraief ldrrtgkaev
      421 dkglmdrata drirsigvpe lshaadrlvd riiehhrdqg efsrlkdylc rvlgeperal
      481 svfkdlieed gyqasaelfg yrgvikhsyl kqpegavpdf ekaieiqpda ahphgrlala
      541 lmdlhqpera faeasraiel yhpdtphwlw qllamaagkn gdyrsalsia mkfgegkvnr
      601 ddgwaflril qalagedeay rksckgiltr wgkesglspk hidvftltll pgaiadyeda
      661 iaearslvnt epgnpvfiqv lgammlragl yqeaedllre atqlhaqtsi dapygyflla
      721 ithcrlgqre kakeslaagd eatqrlrevd hsadtasvln twfmsgvtdq creeaekefr
      781 srfgsssesd qkttvanvea s
//
LOCUS       WP_235908569            5759 aa            linear   BCT 02-MAR-2025
DEFINITION  putative Ig domain-containing protein [Roseiconus nitratireducens].
ACCESSION   WP_235908569
VERSION     WP_235908569.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
REFERENCE   1  (residues 1 to 5759)
  AUTHORS   Bentley,S.D., Maiwald,M., Murphy,L.D., Pallen,M.J., Yeats,C.A.,
            Dover,L.G., Norbertczak,H.T., Besra,G.S., Quail,M.A., Harris,D.E.,
            von Herbay,A., Goble,A., Rutter,S., Squares,R., Squares,S.,
            Barrell,B.G., Parkhill,J. and Relman,D.A.
  TITLE     Sequencing and analysis of the genome of the Whipple's disease
            bacterium Tropheryma whipplei
  JOURNAL   Lancet 361 (9358), 637-644 (2003)
   PUBMED   12606174
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017183.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05345.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..5759
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..5759
                     /product="putative Ig domain-containing protein"
                     /calculated_mol_wt=607473
     Region          <5..>294
                     /region_name="PRK15319"
                     /note="fibronectin-binding autotransporter adhesin ShdA"
                     /db_xref="CDD:185219"
     Region          240..395
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          429..2092
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          2080..2375
                     /region_name="IgGFc_binding"
                     /note="IgGFc binding protein; pfam17517"
                     /db_xref="CDD:465430"
     Region          2404..2476
                     /region_name="Invasin_D3"
                     /note="Invasin, domain 3; cl23771"
                     /db_xref="CDD:474048"
     Region          2492..2574
                     /region_name="Glucodextran_B"
                     /note="Glucodextranase, domain B; pfam09136"
                     /db_xref="CDD:430428"
     Region          2707..2795
                     /region_name="CADG"
                     /note="Dystroglycan-type cadherin-like domains;
                     smart00736"
                     /db_xref="CDD:214795"
     Region          2797..2883
                     /region_name="He_PIG"
                     /note="Putative Ig domain; pfam05345"
                     /db_xref="CDD:398814"
     Region          <3024..3341
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
     Region          <3217..3677
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
     Region          <3551..3861
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
     Region          3861..4763
                     /region_name="RhsA"
                     /note="Uncharacterized conserved protein RhaS, contains 28
                     RHS repeats [General function prediction only]; COG3209"
                     /db_xref="CDD:442442"
     Region          <4444..5525
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
ORIGIN      
        1 miedgvtvhg gngaigrsgy wntannvsvl nrgvidadva grtieirpdg gsftnegvlr
       61 asggtldvdg lvgnagtvel iqgtmnldgn ylvdqniian gdtltlagtw dnqaaidlnn
      121 stlnvsgsws nggtisaigg svylagtpsq igsfsidgat lyldgvltte qldslalnnv
      181 alvvrgtldn tnelleigpg tpirsltidg gailggtvsh adfegarvqd grlgqsvyld
      241 gfgeyvqvgp aeslrlsdsf tieawvyptg pgshasaggi ivnkegeyei arftdgtlqw
      301 afanaspgwt wistgavipe dtwthvaisy qngqvssyln gslvheysgs gsigdvssga
      361 ddfriggrqs adqffqgrid dvrvwnlars gaelaaskda elsgtesgla gywkfneqlm
      421 gafvdsspag neatgqfavp tigvtdnqnn rlhnvaldvd lslsgyrdfl rvtggltlng
      481 eavigreail rfdgtqtfdg ggtvtfssgd pvdeqgigin gsystltige gitiqggngt
      541 igqigypfnt ssnvnvinrg tisatvpgrt ihidpaggtl vnegvlrsdg gdlnvdglvg
      601 aagefeplgg nldidgsyql dqnvdatggs ltlrgtwtnl atltldsvsa slvgsqgrna
      661 gtivataaad vsiqpsrlfs pgaievtena tvtltpehtf egtlnlntgg qvfvpgdfda
      721 vssavvnvdv egplssqfgr ilidgqaaln gtlnvrfsdd fqagfinsfd larygslrsr
      781 fdlvnlyntp ntivsstvye srllrvgena arwidaggga wndpenwisg eapeigepii
      841 idaagnyqis vsqpafggav wipnntsltl tggspltlng ivraedeasv vvrnaildgq
      901 ielqgdyvfs gvdvdadlin tgnldfllds gntsavtrtd tfdgsfqnav ggvirllprn
      961 dsynystgya tqivdfrgda vnqgqiilse rpgyqsgdrg nsilqasagt finestgeii
     1021 svvgegtgtl gsrtirgnfv nrgliqvvdr nlsftegslt nagvvdvpag yslsvngsrf
     1081 npstgeilgd gsfvlgggae lgngtvrgrv lvyevsqpsg vatvnegell flydsgntsn
     1141 asatrtfagt fvnaesgtvq ilprndsyny snatatltid ftngltnegl velseragys
     1201 sgdrgntvll vsggalvnep sgkivsivgq gtgtlgsrtl vgtienhgvi eavdrglsta
     1261 sgtslknfat invsdgltlt lnstdfenns tvdlndsgri dqvggtykpr nailqgdgtf
     1321 tlrggaevlg gtltgnmvfy dagvpanetv snagdlrfyl dsgnassvia treiqggfvn
     1381 lsdgilriyp qnyssnysng ittltvdftn glsnagviel gersgyqsgd rgnsilhvsg
     1441 gtldnlagak ivsavgqgtg tigtrhlrgn vvnngiieil drdllydlgt lsnpgtinvg
     1501 sgysmtvtga rfnpsagniv gdgsfvlrdn aelgdgtihg risfldaiqp ddattvnqge
     1561 llfyfdsgnv naasatrtls gnfanglegi vrllprnyss sysnayatlt vqfengltna
     1621 grielsergg yqsgdrgnsv lqvggtllne stglivatvg sgfgttgtrq iigaidnagt
     1681 lqlddkdliv sggdgitnsg tirldnardl slqagdftqt adgllvgsar sndlstfaid
     1741 gaadfagqvd yelldgfqpp lgasfvpity tshtgqltlv dpqlpgglvl aqtynpdnlt
     1801 ftvaqplrla gdvagggivq evtstevdav laaaiqrwrd agvgridvlg qdlevrianl
     1861 spgflgyasg qtlwidddas gqgwfvdptp lvdeefaadd rgslaaatda sgagadlltv
     1921 vmhelghvlg lpdmvvsgeg gvmnatidvg irrlptdsea sqaarlvapv rgpmsvgeip
     1981 dsrgkefwla fpgsigltgd qaslslritg srptngtvei pglefsksfs vtpgvetvva
     2041 iplsadlsft sdtvtdlgvh vtsteevtvy gvsrarestd aflglptdvl gtqhvvlgyk
     2101 ntdvtpdvfe typgtefaiv gtvdgtsvtv tpsvttgart agvpyvvnld egqtyllqnt
     2161 ggepsdlsgt vitsnrpvav fgghsaanip apavgfadyl veqlspttqw atdfittpla
     2221 trggdtfrvv asedatdvsi dgavvatlnr gevletllse aahltatapv lvaqyansae
     2281 fdgatadpfm mlvagtnqyl gsytvtsnfe afetsfinlv vpdsgigavt lggtpvaaee
     2341 ftavgtsgys taqivlepgt hrvsgpvafg asvygfgpde sygypaglaf dpdtplvasg
     2401 ldlnpesada aigtgvlfta avvdqngdpl pgvavqfsvq ganaasefvv snaqglaqft
     2461 yegfelgtdt vsatagfvsd tsvvswsars idvvidspid gaeipagqsl vvsgsvsvdq
     2521 aadlvslklg dspvqtvdas gnfftritvs pgvntltvta vdslgqsstd tvsirgtqpq
     2581 sdptqldlfs divsasfape ygrtsfndst drlwtdlaie nagnfpvdap lfvainnlsd
     2641 psvrvarpdg ftpdglpyfe ytslvddgtl dpgestasrs iafvnpegvs ftydlvyfgk
     2701 tnqppeivst pnpkafvgrp yqysfvandp ndddvqprli sgpasfmfdp mtglltgtpt
     2761 vedlgthdvr ievsdgrggf aeqqftlsvi qpppnvpprf lstppvvanv gevfeyqpqi
     2821 sdadgddvtl slgrvpeglv lnettgtlsw epsgfqaglq sltviaddgr ggsveqsfsv
     2881 lvsqeigdqv piivstppaf gisgqtyryd vdaydadqdp ltyslldgpa gmrvqsdtge
     2941 ltwqvaeist ldfedlqhdg adfvgidqlg ddpltiyere gyviealspn llglgaygta
     3001 speysgsaal anrtvtgvte lraiggapft lnsldlaeag fgsgaastvt flgrrddgte
     3061 vvktvttdgg nfspervtfe dftevnsvrw tqsspfhqid nvvvsstlra vnqqhvvtvq
     3121 vddgrggidt qsftlfttdt ppnsdpvids tppllatvgq pygyflsasd pdfdavtlvv
     3181 asgpegmqid etglltwtpd tsgpqavlir asdgrggatv qsfvinvgep ennlppqina
     3241 tpntdavadv pyeyqviasd pngdflsyel lnspegmvid drrglitwtp tedmifepve
     3301 dttfeilgtt evtvevsdsr ggtdqqtfti lvravdnlpp rldslppsea efgepyiyda
     3361 dasdldgdtl tyslvavqae flnesfdsed lqglslgell kargslntgv ftipegmsid
     3421 adtgvltwtp gledftqtie tdegektvln ldasgdfgvl eiiirvedgn ggfdlqqfpi
     3481 tvyvpngvpl itseptttav aelpyrytvv aqdpenedls felvgsptna sidetgvlnw
     3541 tptadqvgtq tmtirvsdps ggettqsfdi evaevganay pfvfselpsr vrlggtllyr
     3601 vealdpngdp laftvtqgps gmtvgagada pnlvrwtptn gqvgthdisl qisdgrggvi
     3661 tqtgsidvvv gqqnaapait snpaftavlg qmyrydvsav dpdgdfvays latkpvgmsi
     3721 ndqtgeirwt pgddqldsyn vvveasdpfg gigrqsftvs vrpvnsspaf vttpptqayv
     3781 drvygygiga edpdgdplgi rlldgpegik lddttgvitw rpgesqigsh pvsvevfdaq
     3841 ggsakqsfei vvdvapenia ptitstpptv aqvdvalayl vtaidpensl dsfalegdvp
     3901 dgvqlnantg lltwtpagtq tgentitvva idaegakarq tfkidvraan rlpiitgppv
     3961 ysalpgetyr mnfpasdpdg drltyvieeg pagmmidang rvtwdvgtdd vgthpvslta
     4021 gdafglvrlr ydlvvredsq apqvqvsfsd npaeigsdvt vivtavddir vasvtatvng
     4081 evlvldsrgr atlpgdtags fvvsatatds vgnrtteaat lritdpsvvg dpeieitspt
     4141 idqqitgpis vtgtindpdl ayytievapl vgdgdfvevf rgtgnvadge lgtfdpsmlq
     4201 ndeyllriya vdsggndaev qvpvsvtgdl klgnftlsft dltvpvsgvp ivvsrtydtl
     4261 daanqsdlgy gwrlnihdtd lrtsvpksgl edigiynrff ynarvyvttp gggregftfe
     4321 peiapgiaga ylgiwrpkfv pdegvtsrle vpradlmnid gefvgfgsgw aynpsdsifg
     4381 ggytlttkeg lvyeingdtg dadlirdrng nklmfeetgi rsstgaeiqf erdgrgrita
     4441 vidpegnrie ygysaagdlv svtdregntt emvyrndrph yleevidplg rvgvksiydd
     4501 dgrlsrmvda dgqeiainyn pdnfiqtvad qlgnettyey dtygnvvtei daeglvtnyq
     4561 ygdtndptle tavtqvledg telttsyqyd srgnvlletd pkgnttryty nsfgdvvstt
     4621 dangnttsns ydsngnllat tdadglrtef nydssgnptr lvvgsnvtlf qydgagrvtr
     4681 qedatgavrs ftydengnql tetvsyttss gpstvvtene ydrdgrvtst tvkqngvilt
     4741 rsgtvfdavg npvqsidalg ritkflyddr gqltetiypd dtpgtdadnp rtktqydaag
     4801 qviaqideag rvtrfeydsa grqtktifpa itaadpddld psdnpftesv ydragrtvae
     4861 idelgnrtqf vynaagnvtq tilpddtpgd dsdnpriidr fdsagrrtas idplgnvtkf
     4921 vytaggllse tilpddtpsd dsdnarnrss fdsskrlasr tdangnvtey eyddasrlta
     4981 viqyvtdpat qelkalrtey aynelgnlvt qtdandhstt feydglgrrt atvlpmgqrs
     5041 etefdaaarv iettdfngks isfdydvrdr ltaknfpdgs attftytvtg lretatdgrg
     5101 tteweyderd rlvsrtdpdg aeisytydat gnrtslttai gsndprttsy tfdalgrtet
     5161 vtdpeglttt yvydaagrpt emhlpngtae frsydaqsrl tmiehknttt devfasfeyd
     5221 ldkvgnriav tehdgrrvey dydelyrlls ediydpgagn tpsrtidyvy ddvgnrlerd
     5281 dsgegattyl yddndrllee tldsmvttye yddngntlrk avdgvdqvry ewdfenrlia
     5341 adtnadgtnd vayeydvdgi rvsktldpeg tpvitqflid anrpysqvle eytpggilkv
     5401 syvhgldlis qnrhgetgks fyhvdglgst raltngsgiv tdsyiydafg qtigqvgssg
     5461 nvylfageqr dlvlgldylr aryvspslgr fvsrdsfegv lndpltlhkf ayahnsptnl
     5521 idpsgnvsls svvvsvsiat tvgavfggaf sgglyltsdt rvfmdvihgn vsspsvkafs
     5581 navwggakrg alagaivgla gpaisaaagg glaggaavgg tagggselgv qifdyatgei
     5641 qefdieaial stgsgillgg lfvpkvpasg tvtvtqfgys slkspswvmi ggrnrishlf
     5701 sgtkggahak pynsgveyqv lakdlkppal eldygyavgk asqfiknllg qriytgppk
//
LOCUS       WP_235908690            1304 aa            linear   BCT 02-MAR-2025
DEFINITION  c-type cytochrome domain-containing protein [Roseiconus
            nitratireducens].
ACCESSION   WP_235908690
VERSION     WP_235908690.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019262.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07635.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1304
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..1304
                     /product="c-type cytochrome domain-containing protein"
                     /calculated_mol_wt=144449
     Region          64..118
                     /region_name="PSCyt1"
                     /note="Planctomycete cytochrome C; pfam07635"
                     /db_xref="CDD:429568"
     Region          <787..911
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          951..1283
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
ORIGIN      
        1 meqtevissp rvtmptqvna sqsseppsad taahsyesqs fgenphvvdk qlaseaeail
       61 rrncyrchge nesdeggfgf vtsrkkliss gfvvpgsskd sllfermvsv dspmppdges
      121 prptdedvet irswihsgsk pfkesvpqqf vtpdafyevl agdlntvpak ervyvryfsi
      181 thlanagyse deleiyrtal akllnslswn rqlanlrvvn nletvyridl rdlkwtdksw
      241 ksilagypyg llhpseaavt vrdqthslip vvradwftsa asrpplyhdl aqipatdrql
      301 eqllqvdvqr nleetrvvra gftrsgvsqh nrlierhesi fgaywksydf agssgrknlf
      361 dlpmgpgkta tdfehdggei ifqlpngmla ymlvdaegkr idkgptsivs dprqpdravv
      421 ngvscmschy ggfiqksdei rqhvlanrav ypraddilal ypdsetvsaa iakdtkaylt
      481 alaaseigid qptqagepiv laslrynnel dlplasaelg mtpesmleel tklsdsnlsr
      541 rvgsllrkgg vvkretfvds ffqltnalnl grratvavpn aiadvppqat aqppapaikr
      601 mnisslpmgt qpgvaeqala tarqlststk wrdaaphfei airaattati rlkvceeave
      661 fyqrmeavea vldvycyiin scrtprevnr treqmfatlq amtgkdpsws rstepfqwpl
      721 sttraiantf epqlakfpnh eptllvldhf ysniqqddtk hrvvlerldk ilrargermk
      781 iercvtlanl mveagnglea arltereips afgtqkanly llqasafves gnkskamtsl
      841 eqafqawraa rshaianayv emgdlymrld erdlaaeryr saliaqapdy sveqlqakla
      901 ravgqqptla ampdgqagsg adapsdesll dpkrrfaiaa aqaesnasth ptlivnsmme
      961 aadlwikagd naraikavkk asaankragt sarsnhdkla klfvragdhq aalnqwival
     1021 kseklassis gyqvqiealm qedasltldd qtkplldpky aprvqaqqie asrsydasgr
     1081 aanllraagy wheagekees lrcmaaaeka idtiasgans srsetpytql adayaehemp
     1141 adevrclvaa vkhcrsdssa qryferikll cqthslpvpk fdaevakkld plnryrvqaa
     1201 dyheqakqtp asagtyyrma veawvraeey engllvanew atlllkdked rqyesnlgrl
     1261 adlyvklkrn dlakksyeeq lkattsdsrk rsvqrkidrl sese
//
LOCUS       WP_235908710             185 aa            linear   BCT 02-MAR-2025
DEFINITION  septation protein SpoVG family protein [Roseiconus
            nitratireducens].
ACCESSION   WP_235908710
VERSION     WP_235908710.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
REFERENCE   1  (residues 1 to 185)
  AUTHORS   Graumann,P., Schroder,K., Schmid,R. and Marahiel,M.A.
  TITLE     Cold shock stress-induced proteins in Bacillus subtilis
  JOURNAL   J Bacteriol 178 (15), 4611-4619 (1996)
   PUBMED   8755892
REFERENCE   2  (residues 1 to 185)
  AUTHORS   Hudspeth,D.S. and Vary,P.S.
  TITLE     spoVG sequence of Bacillus megaterium and Bacillus subtilis
  JOURNAL   Biochim Biophys Acta 1130 (2), 229-231 (1992)
   PUBMED   1373326
  REMARK    Erratum:[Biochim Biophys Acta 1992 Jul 15;1131(3):353]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015959.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04026.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..185
                     /product="septation protein SpoVG family protein"
                     /GO_process="GO:0030435 - sporulation resulting in
                     formation of a cellular spore [Evidence IEA]"
                     /calculated_mol_wt=20411
     Region          3..110
                     /region_name="SpoVG"
                     /note="DNA-binding protein SpoVG, cell septation regulator
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG2088"
                     /db_xref="CDD:441691"
     Region          47..>71
                     /region_name="DZR"
                     /note="Double zinc ribbon; pfam12773"
                     /db_xref="CDD:432773"
ORIGIN      
        1 messedrlra fcsitidecf vvrdlkiidg angpfvamps rkltghcsrc hhknhlrany
       61 cnncgnklsf dqdgaldspq klyadvahpi nsecremiqn avieefdael krceqpgyrs
      121 rydddfmdag edvetayvdp phgklqpprq searpgetqp setrpegggq sggegdddqf
      181 gagif
//
LOCUS       WP_235908715             534 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Roseiconus nitratireducens].
ACCESSION   WP_235908715
VERSION     WP_235908715.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
REFERENCE   1  (residues 1 to 534)
  AUTHORS   Das,A.K., Cohen,P.W. and Barford,D.
  TITLE     The structure of the tetratricopeptide repeats of protein
            phosphatase 5: implications for TPR-mediated protein-protein
            interactions
  JOURNAL   EMBO J 17 (5), 1192-1199 (1998)
   PUBMED   9482716
REFERENCE   2  (residues 1 to 534)
  AUTHORS   Lamb,J.R., Tugendreich,S. and Hieter,P.
  TITLE     Tetratrico peptide repeat interactions: to TPR or not to TPR?
  JOURNAL   Trends Biochem Sci 20 (7), 257-259 (1995)
   PUBMED   7667876
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019339.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07719.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..534
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=59810
     Region          30..>193
                     /region_name="ArnT"
                     /note="PMT family glycosyltransferase ArnT/Agl22, involved
                     in glycosylation of proteins and lipid IVA [Cell
                     wall/membrane/envelope biogenesis]; COG1807"
                     /db_xref="CDD:441412"
     Region          421..>530
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          422..450
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(423,426..427,430..431,433,457,460..461,464..465,
                     467..468,491,494..495,498..499,502)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          455..485
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          490..517
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mqtievptli rllgdargyf dwavrisdgn wygtetfyqa plypyflavl ikifgpsvtg
       61 irlvqmilgv agvaligltg rklfsekvgl vsalmlaayp paiyydgiiq kaalatfllc
      121 lvltacaylq kdprwwhavl agvslgmlvl trenallwtp iiplwillgl rdakwrrwtl
      181 vgcyagglav illpvaarna slggewsptt fqagpnfyig nnrqangiyv plipgrgtpm
      241 yeradaerla eqtvghelsa revskfwmsr awedirqapg rwvqlmvakt fmvfnryevp
      301 dvesmyifre ysgplklsri whfgtlcplg iwgliatrrn wrqlwlfyll lvtmiaavvl
      361 ffilgryrnp iaillipfaa agvadliacv rerrrlisaa vvlllsgifc nihvheersl
      421 qascymnmgi sackagdlpa girmlqhaid efpemaegyv nlgraymmnr qpdlaaqcfq
      481 nalildprlm gihyqlgeal eysgkrqqai eqyqraltin padaraaeal nrlq
//
LOCUS       WP_235908723             446 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Roseiconus nitratireducens].
ACCESSION   WP_235908723
VERSION     WP_235908723.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..446
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47518
     Region          41..>434
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(62..63,66..67,70,102,157..158,160..162,165,185,
                     188..189,192,266,269..270,273..275,278,302,306,359..360,
                     364,368,384,387..388,391..392,395)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340863"
ORIGIN      
        1 mddqttdtkl permtgsvsp yrppvevsep ppaaapvedd ssawaplrnp vyrsfwiasl
       61 vsnlgtwmhe igagwlmtdl daspqmvsav rtamatpivl laipagvlad rvdrrhlllg
      121 tqaillctta tlaaltaagw vtswlllalt fliglgltlh vptwqasipe lvprrqlsra
      181 ialgsvsfnl aravgpavag alvaitgswi afsfnavsfa gvilvllgwr rdrsestrgl
      241 sfhrsmyqgl ryvyrtptmr ntllrvglfv lpasalwgll plvakvrlqw gadgfgilvt
      301 cvgagavlaa rflpavqsrl gsdrtvstam lvfatglylm asssqrlvva aaavvmgcgw
      361 mmtlttlnts aqitlpsrmr argmscylta malsmstgsf lwgsvaeals igraqkiaai
      421 tlmvtaaigl cfrisngtrq esrsrp
//
LOCUS       WP_235908730             819 aa            linear   BCT 02-MAR-2025
DEFINITION  4Fe-4S binding protein [Roseiconus nitratireducens].
ACCESSION   WP_235908730
VERSION     WP_235908730.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012267.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00037.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..819
                     /product="4Fe-4S binding protein"
                     /calculated_mol_wt=88513
     Region          272..500
                     /region_name="NapH"
                     /note="Polyferredoxin NapH [Energy production and
                     conversion]; COG0348"
                     /db_xref="CDD:440117"
     Region          564..722
                     /region_name="DMSOR_beta_like"
                     /note="uncharacterized subfamily of DMSO Reductase beta
                     subunit family; cd16373"
                     /db_xref="CDD:319895"
     Site            order(572,579..582,584..585,589,593,601,603,615,618..621,
                     625,629..630,633..634,650,666..669,673..674,678,680..681,
                     709,711..715,718,722)
                     /site_type="other"
                     /note="Fe-S cluster binding site [ion binding]"
                     /db_xref="CDD:319895"
ORIGIN      
        1 mrrlaigaai amlgtavlla gwtdhplsra lsdgsslltv avgglliava vlvllttldr
       61 grtgallrld cflpflkrir dgsspshsva grmlrrivpa swqsdwatkk rgsfrkrmgq
      121 lgiswraapv rrliqsicll tflvlffvvc wpysarpapv geiwpgwsfd gvdqqsgefl
      181 fsggetgksp iaahqqlfvf desvpdpasg aagsydvvev ttdqirlrst ddlsaaldtl
      241 ligggpwtlr qsdptawpsh yadnlrrkei ipaelflaid plvslstaia srsyvwslva
      301 agiillicvl iprgfcgylc plgttidlfd wavgrrvtrf rvgndgwwvh ikyyllagtl
      361 vcavlgilvs gfvsaipvit rgmlflvdpl qsgslrgwhl vpamnlghli sitlfigvla
      421 lgflrprfwc kyvcpsgavf slgnlfrvte rkvesscihc nkcveicpfd aikpdfttrt
      481 tdctlcqscg gvcpthaikf verwnlvelk apndpptget algrrgflsl aggsaaavag
      541 gvamagmtkt fganlnapda fhpvrppgsv peqeflqmci rcgecfkacp nnvlqpeafq
      601 qgleglwtpm vnadwagces scnacgqvcp tgairalple ekkvarmgla ivnsdtclpl
      661 agredcdlcv qecnaagyha ieyikvraev dddgqpiegt gflapnviad qcvgcglcqt
      721 rcyginvkek hllqesaiiv qagegredrm msgsyrqkrk reqaerqqts sepaadsyfv
      781 pnseptedpf gtlpdpsqpe pnagvpdddp fgiqsddpf
//
LOCUS       WP_235908814             126 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6384 family protein [Roseiconus nitratireducens].
ACCESSION   WP_235908814
VERSION     WP_235908814.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039746.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19911.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..126
                     /product="DUF6384 family protein"
                     /calculated_mol_wt=14613
ORIGIN      
        1 msqaqarapr pdlrseltle etlrvmdvar emreqrqaae emfhrddmrk alrdklmrta
       61 rlsgdsvteq eidaaidqym etrytyedpk agfknfmahc wvwrdrilfs laglaatagg
      121 lwyffg
//
LOCUS       WP_235908750             549 aa            linear   BCT 02-MAR-2025
DEFINITION  ThuA domain-containing protein [Roseiconus nitratireducens].
ACCESSION   WP_235908750
VERSION     WP_235908750.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
REFERENCE   1  (residues 1 to 549)
  AUTHORS   Ampomah,O.Y., Avetisyan,A., Hansen,E., Svenson,J., Huser,T.,
            Jensen,J.B. and Bhuvaneswari,T.V.
  TITLE     The thuEFGKAB operon of rhizobia and agrobacterium tumefaciens
            codes for transport of trehalose, maltitol, and isomers of sucrose
            and their assimilation through the formation of their 3-keto
            derivatives
  JOURNAL   J Bacteriol 195 (17), 3797-3807 (2013)
   PUBMED   23772075
REFERENCE   2  (residues 1 to 549)
  AUTHORS   Ampomah,O.Y., Jensen,J.B. and Bhuvaneswari,T.V.
  TITLE     Lack of trehalose catabolism in Sinorhizobium species increases
            their nodulation competitiveness on certain host genotypes
  JOURNAL   New Phytol 179 (2), 495-504 (2008)
   PUBMED   19086182
REFERENCE   3  (residues 1 to 549)
  AUTHORS   Jensen,J.B., Peters,N.K. and Bhuvaneswari,T.V.
  TITLE     Redundancy in periplasmic binding protein-dependent transport
            systems for trehalose, sucrose, and maltose in Sinorhizobium
            meliloti
  JOURNAL   J Bacteriol 184 (11), 2978-2986 (2002)
   PUBMED   12003938
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018038.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06283.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..549
                     /product="ThuA domain-containing protein"
                     /calculated_mol_wt=61056
     Region          55..248
                     /region_name="cysteine_hydrolases"
                     /note="Cysteine hydrolases; This family contains
                     amidohydrolases, like CSHase (N-carbamoylsarcosine
                     amidohydrolase), involved in creatine metabolism and
                     nicotinamidase, converting nicotinamide to nicotinic acid
                     and ammonia in the pyridine nucleotide cycle. It...;
                     cl00220"
                     /db_xref="CDD:444760"
     Region          295..527
                     /region_name="COG3828"
                     /note="Type 1 glutamine amidotransferase (GATase1)-like
                     domain [General function prediction only]"
                     /db_xref="CDD:443040"
ORIGIN      
        1 mpmalllclc gllvfpaash aqpleltlqf qsptspdspr fhrrqrqerw vsertavivc
       61 dmwdshhcvn avrrvaqlap ridafcgslr ergvtiihap sscmdayqqh psrlrslqvp
      121 klesypdeid swcdqipsee raaypidqse ggedddlleh rqwaqrlaae grdprapwlr
      181 qvaeiqidpq qdyisdrgse iwgilaanqi dnvvlvgvht nmcvlgrpfg lrrlasagkn
      241 vvlardltdt mydprawpya shftgtdlii dhveryvcpt iassqvlgge pfrfsaddrf
      301 klvmliaede yqtaatlphf aakhlsqhfs vqtlfgseqd rnqivgldav rdadallvsv
      361 rrralaasel ailrefvska kpvigirtas hafslrgkep ppgqavwpef daqvfgghyt
      421 nhhgnqltae ilkpaadvrh aildatkvtq iqpggslyqv splaagtfvi aegqvpdepa
      481 epiawtfirs dggrsfytsl ghpddfsqpe feallsagvh wacglkphrl sdvreqeery
      541 qagqgkqrk
//
LOCUS       WP_235908882            1067 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein [Roseiconus
            nitratireducens].
ACCESSION   WP_235908882
VERSION     WP_235908882.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..1067
                     /product="cadherin-like domain-containing protein"
                     /calculated_mol_wt=112586
     Region          476..569
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          585..669
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(588..589,634,636,666,668..669)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          868..925
                     /region_name="Dockerin_1"
                     /note="Dockerin type I domain; pfam00404"
                     /db_xref="CDD:459805"
ORIGIN      
        1 maqrrvlavi tgavfhdldg slrqeagevr lpsrlayida nqngtpdsde pfsltdadgq
       61 fhfdglsegi ypirlfdgma eqsqsfpaea sehvlpvsfs sdpismrlsg stlqvlteqt
      121 liraetsgtr ateiplefap hqfvadhlpg iegagagpha iisgadlsdp sdptahlwai
      181 prvsdlvgrl dpplnvslas gtltaetvsv gpdgsgvllv apsdptqgsl ntlysvrlsv
      241 aetdsspeas tsnieadlqp tpwtvphntq vltatsagds igsrtiiawp tsttdsesgv
      301 dnsanesssl qmalwsnaea twispspqqi dkatelisfd dasgllavry fdggigvldv
      361 dagfsvlhef sdlhgpatli nggdalaavt sgesgsrltv hdlrggqllv ehplrladig
      421 tpiqiisgds vqsfyvlgqn gvasvqfnlp tahrveiena sqvvnvdfgi qtlglnhspe
      481 vpdrleldgl edkgvvlsaa dlaaavtdad qdrlislias gpsngtasin sdgdityqpd
      541 anffgadsfs iqlhdgqsvs spitvsvslk svpdvpggvt lidgeipeha adlttvgslq
      601 indpdpsndy dlsvsdprfk iengslvlvh gplnhefepe ismtisgydf gaeqyfyaev
      661 tiavldendp ivylgayepd vmenqpgifv aqfqafdedd dtltysvddd rflmdeekly
      721 lkpdqaldfe aepfvtvtvs addghgssls tdlkinvydm pealgaitls nqtvmelkpg
      781 atvgtvqiag gaiannhlvs vddqrfeidg stlklrdgew vqrsvaeqie ltisaedtah
      841 lspsvsesfv ievlqnqsaf hnvdvpqdvd gngvvspida ltiinylniy gpgeigpgdp
      901 sfgydvngdn ditpldallv inflntaqns tgsvsgppsg envpatpaeg epdtpdglri
      961 agpdgegeaa padsqplqrq agagsvagin dapvtdpesg tptaddpnla esnradaptt
     1021 prlrrivvar daalqssdwl dsrkrdetdp qvaravndll kllhrrv
//
LOCUS       WP_235908862            1046 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1553 domain-containing protein [Roseiconus nitratireducens].
ACCESSION   WP_235908862
VERSION     WP_235908862.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019223.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07587.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..1046
                     /product="DUF1553 domain-containing protein"
                     /calculated_mol_wt=118308
     Region          43..99
                     /region_name="PSCyt1"
                     /note="Planctomycete cytochrome C; pfam07635"
                     /db_xref="CDD:429568"
     Region          162..354
                     /region_name="PSCyt2"
                     /note="Protein of unknown function (DUF1549); pfam07583"
                     /db_xref="CDD:429550"
     Region          541..766
                     /region_name="PSD1"
                     /note="Protein of unknown function (DUF1553); pfam07587"
                     /db_xref="CDD:429553"
     Region          809..978
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
ORIGIN      
        1 myrfalccfv vlslatdsfg qsnsradedl feihvrptlv ahcirchgpd kqegglklts
       61 ledllaggds gpaivigkpe esllvealry esyemppdgq leqdrisgmv qwiaagapwp
      121 ndvalkmppk iadedrqwwc yqpiadpepp aidgdtwcrn gidhfvlskl sqaglhpaep
      181 adqltlirrl hftltglppd araieeassp dfdydawvqr lldspaygen qarfwldlvr
      241 yaesdgyrad ferpeahhyr dyviasfned ksydqfvreq iagdeiapgs realtatmyl
      301 rhwiyehnqr dvetqwheil sditettsdv flaqglkcar chdhkfdpll qqdyfrfkaf
      361 faafqptedq piadvqarra yqqqlaeweq ataeirkrlr kielpvalkh atregfdkfi
      421 peiqamirkp vdqrtpyehq iaslasrqfd lpydkldqwl sveeqaerqs lkqelakfds
      481 lkpeplermk fvasdvgpva pvtyvpddke kkpvspgylt llnpdpatip dlpeplettg
      541 rrtalanwia npqnpltarv ivnriwqqhf grglvdnssd fgrlgappth pllldylasr
      601 liedgwslkk lhrriltsat yrqssqrpid qlakesdpnn dllwrmrtrr lsgeeitdav
      661 laasgelekl kraiykpvrr nspdpllaaf dapdrirsvg krhrtttstq alllangsws
      721 hqraraiadr feseqddtda flqslypalf grqasldevl maedfveryv qatpeqtvpe
      781 yqslvtmpst gqqavnlqpg gplrmslkas dslpegdfti eavvllrsiy ddasvrtiva
      841 qwkgskkqpg wslgvtskks ryeprnlilq ligknaqgdd lhyevvpsgl rpelnkpyyv
      901 avrvdlqdps esgitfylkd ltdkdaklrt asakhtvvsg irpsndvtig drfghhqwdg
      961 lidslrvedr srdlsqvaqa dspeglpryv idwqfedpqr lgldssgngn hawakverpe
     1021 vetpreqalv alvhallnsn eliyvd
//
LOCUS       WP_235908902             832 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1592 domain-containing protein [Roseiconus nitratireducens].
ACCESSION   WP_235908902
VERSION     WP_235908902.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019259.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07631.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..832
                     /product="DUF1592 domain-containing protein"
                     /calculated_mol_wt=93868
     Region          71..122
                     /region_name="PSCyt1"
                     /note="Planctomycete cytochrome C; pfam07635"
                     /db_xref="CDD:429568"
     Region          159..222
                     /region_name="PSD3"
                     /note="Protein of unknown function (DUF1587); pfam07626"
                     /db_xref="CDD:429563"
     Region          424..485
                     /region_name="PSD5"
                     /note="Protein of unknown function (DUF1595); pfam07637"
                     /db_xref="CDD:429569"
     Region          490..617
                     /region_name="PSD4"
                     /note="Protein of unknown function (DUF1592); pfam07631"
                     /db_xref="CDD:429565"
     Region          637..734
                     /region_name="PSCyt3"
                     /note="Protein of unknown function (DUF1588); pfam07627"
                     /db_xref="CDD:429564"
     Region          756..829
                     /region_name="PSD2"
                     /note="Protein of unknown function (DUF1585); pfam07624"
                     /db_xref="CDD:429562"
ORIGIN      
        1 mprtksiglr adveatrigi awlifvmlva wstqlvavep esqtdstsap nslpsgvmpp
       61 kvtadflqth cldchdgdsg eggfgldvil gesahglpdp kamhhwvrvf drvndgempp
      121 ddygevdakq kakflkrtfq wldqtqsqqi aregrvpsrr ltnlqlentl cdllsvdipl
      181 rrlmpqeqrt egfrniaeaq amshyylqdh ltvvdaalda aferaedrta glelempper
      241 iankrkgqrn rdpemrqdaa vvwacdmsfy grisnsrlrd agwyditlna saiklpkdrg
      301 lwctvrsgec vsraplmswi gsfeatetpa eyhftawiea dhmleitvtd smvekarfqg
      361 gqvgfgegep qdvpglamhs lsirrvfpgg evsdvrqslf gdlkvrfdkk skrwelesea
      421 pqadlnrqlk rfadrafrqp vsaeqlrpye qalhvaleng vasaqalrqa yrallcsprf
      481 vyfqehpgrl ddhavatrls ylltgsmpda alrkaadrge lrdpqtimeh trrllqgdgl
      541 ehfvtdfadq wldladidft epdrrrfref dqvvqhamle etrrflntml venrpardlv
      601 dadftwlnnr laeyydidcs lepsqwtlvs ladhprrggl mtqgailkvt angtntspvv
      661 rgvwvcdrll gvpipdppen vpaiepdtrg tttvremlek hrsqvecaac hsridppgfa
      721 lehfnaagqw rdryrignkr sskegpevds ayqladgref dsfmefrdla atdhdrvarn
      781 faakvltyat greptfadrk aldeivaete eqqhgvrsli eavvtsqpfl nq
//
LOCUS       WP_235908955             454 aa            linear   BCT 02-MAR-2025
DEFINITION  META domain-containing protein [Roseiconus nitratireducens].
ACCESSION   WP_235908955
VERSION     WP_235908955.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
REFERENCE   1  (residues 1 to 454)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
REFERENCE   2  (residues 1 to 454)
  AUTHORS   Uliana,S.R., Goyal,N., Freymuller,E. and Smith,D.F.
  TITLE     Leishmania: overexpression and comparative structural analysis of
            the stage-regulated meta 1 gene
  JOURNAL   Exp Parasitol 92 (3), 183-191 (1999)
   PUBMED   10403759
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015669.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03724.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..454
                     /product="META domain-containing protein"
                     /calculated_mol_wt=50104
     Region          63..328
                     /region_name="SerB"
                     /note="Phosphoserine phosphatase [Amino acid transport and
                     metabolism]; COG0560"
                     /db_xref="CDD:440326"
     Region          338..448
                     /region_name="HslJ"
                     /note="Heat shock protein HslJ [Posttranslational
                     modification, protein turnover, chaperones]; COG3187"
                     /db_xref="CDD:442420"
ORIGIN      
        1 mtgicstmig svrrlaavig llavsavada qplpswndgp akqaivdfva kvttedspdf
       61 lapqdriavf dndgtlwpen plpfqlmfal delrrlapdh pqwkqnpviq aaldgdvavl
      121 kkdlkkslse ilkethagtt vdefdqrvrd wlstarhprf drpyngltyl pmqevlaylr
      181 ehgfrtyivs gggkdfmrvw aedtygippe qvigsmgplq feirdgvpvl arqagidfid
      241 dkegkpvaih rsigrrpvaa fgnsdgdlam lqwttmtrsp sfglivhhtd pereyaydrd
      301 passgklvta leqseqqgwv vvdmkrdwkt vfettaasdg dmsldatnwi aediggrgvv
      361 diaqstlsfd qpnhvtgnta vnrfsgpaki dgrslqlgpl attrragppa lmdqenrflk
      421 alsavrsyrf dgqrklllld eqgqvlvkla qldr
//
LOCUS       WP_235909012             709 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding protein [Roseiconus nitratireducens].
ACCESSION   WP_235909012
VERSION     WP_235909012.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024825.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13433.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..709
                     /product="transporter substrate-binding protein"
                     /calculated_mol_wt=77254
     Region          1..390
                     /region_name="SPS1"
                     /note="Serine/threonine protein kinase [Signal
                     transduction mechanisms]; COG0515"
                     /db_xref="CDD:440281"
     Region          323..684
                     /region_name="Peripla_BP_5"
                     /note="Periplasmic binding protein domain; pfam13433"
                     /db_xref="CDD:463875"
ORIGIN      
        1 mgvvlraydp tlerdvaiki lpehtaatst alsrfqseak aagklnnahv asiheigqeg
       61 echylvmell tggsvseeiq ahgactplea trvlmdacrg iaaahaeglv hrdikpanll
      121 raadravklt dfglaklssa ssamqltqtg tvigtpyfms peqcqgqavd trsdiyslga
      181 tyfclltgrq pyddsdsvvq vlyahcnkni pdprdfdpsi ptacssivsr amakdpddry
      241 qsaeamlrdl eavaaalsge arielpsqtg talqaivptk prhrrhwmlg gavglvliaa
      301 aafalsrilp hfaaslapqg epikvgvlqs lsgtmstsgt svidatllai eeinesggll
      361 grpvkavvad grsntetyar eaerliadeq vctvfgcwts asrktvrpif enhdhllvyp
      421 vqyegmetsp nivymgaapn qqiipavawa qehlgkkrff fvgsdyvfpr taneiikdqf
      481 qgtearvvge myvplgsthf esvaqailea kpdmilntvn gdsnlaffre mrnaginrkd
      541 ipcmsfslge qelrslsisd vvgdfaasty fqsldtdanr aflarfkanh phrvvsdpmq
      601 dayvgvllwa qavretqsie pkrirramlg qriaapegnv ridpetqhcf ktprvgqirs
      661 dgqfeivwsa pepiapepyp asrsaadwka flhdlyigwg nqwmsrmkd
//
LOCUS       WP_235909088             151 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2195 family protein [Brucella anthropi].
ACCESSION   WP_235909088
VERSION     WP_235909088.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021478.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09961.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..151
                     /product="DUF2195 family protein"
                     /calculated_mol_wt=16113
     Region          31..151
                     /region_name="DUF2195"
                     /note="Uncharacterized protein conserved in bacteria
                     (DUF2195); cl02042"
                     /db_xref="CDD:470444"
ORIGIN      
        1 misgsgqkls eadevirisa rrrrslfrsf vavffcaisa ghaasseave idlqnglsac
       61 vdlkpgqmkr qanivsfdar fnlhrsigmc gcmsalvnyt asvdvngirq klqqgiisla
      121 regdrtvila sdqnliagkd vrvelscagp l
//
LOCUS       WP_235909092            1102 aa            linear   BCT 02-MAR-2025
DEFINITION  autotransporter domain-containing protein [Proteus terrae].
ACCESSION   WP_235909092
VERSION     WP_235909092.1
KEYWORDS    RefSeq.
SOURCE      Proteus terrae
  ORGANISM  Proteus terrae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Proteus.
REFERENCE   1  (residues 1 to 1102)
  AUTHORS   Oomen,C.J., van Ulsen,P., van Gelder,P., Feijen,M., Tommassen,J.
            and Gros,P.
  TITLE     Structure of the translocator domain of a bacterial autotransporter
  JOURNAL   EMBO J 23 (6), 1257-1266 (2004)
   PUBMED   15014442
REFERENCE   2  (residues 1 to 1102)
  AUTHORS   Veiga,E., Sugawara,E., Nikaido,H., de Lorenzo,V. and Fernandez,L.A.
  TITLE     Export of autotransported proteins proceeds through an oligomeric
            ring shaped by C-terminal domains
  JOURNAL   EMBO J 21 (9), 2122-2131 (2002)
   PUBMED   11980709
REFERENCE   3  (residues 1 to 1102)
  AUTHORS   Henderson,I.R., Navarro-Garcia,F. and Nataro,J.P.
  TITLE     The great escape: structure and function of the autotransporter
            proteins
  JOURNAL   Trends Microbiol 6 (9), 370-378 (1998)
   PUBMED   9778731
REFERENCE   4  (residues 1 to 1102)
  AUTHORS   Pohlner,J., Halter,R., Beyreuther,K. and Meyer,T.F.
  TITLE     Gene structure and extracellular secretion of Neisseria gonorrhoeae
            IgA protease
  JOURNAL   Nature 325 (6103), 458-462 (1987)
   PUBMED   3027577
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015737.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03797.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1102
                     /organism="Proteus terrae"
                     /db_xref="taxon:1574161"
     Protein         1..1102
                     /product="autotransporter domain-containing protein"
                     /calculated_mol_wt=126702
     Region          <205..296
                     /region_name="DUF3466"
                     /note="Protein of unknown function (DUF3466); pfam11949"
                     /db_xref="CDD:432213"
     Region          <256..371
                     /region_name="COG5563"
                     /note="Uncharacterized conserved protein CPn0794, contains
                     PKD-like HAF repeats [Function unknown]"
                     /db_xref="CDD:444305"
     Region          375..>685
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          540..781
                     /region_name="tolA_full"
                     /note="TolA protein; TIGR02794"
                     /db_xref="CDD:274303"
     Region          832..1083
                     /region_name="Autotransporter"
                     /note="Autotransporter beta-domain; smart00869"
                     /db_xref="CDD:214872"
ORIGIN      
        1 mfprnlptil askynniiit sdkyntnish digktfnslk ikdfnnisal slsedghylt
       61 ahgeynnnsv ffvydvflke iklfnhkddi syyieddyyf ttndglfsly sedndpyary
      121 tsprekkffi fdnenkksis lsewnktkin nhieknkfil fedlafinkl iklkpnitap
      181 sfsgkylygt lqrenqesks vrlafiydks nddvkiisds dygsskinqf skndlavgwi
      241 esrikrrnes ndrlireafi ydptknkirk piinntgydr yynseatais engeffvgwv
      301 eygnniinkt splskylrna fiyfveenks qlllnlnndi keseahsisk dgntvfgisk
      361 didstwrmva wnlgrkteqe ieknqrkeai nikfdtllan ndikkvtdns nlllekiall
      421 kenintqree llnklettkn emhkankerv rieniidkge engdqdifnr ysdeyhrnky
      481 keeeyqknve dlntkianfd kgeqstelkl teyeyekskt tlnaltqkna tievdkkqrl
      541 ddeakaeqer lakeqadktk aeqeriakeq adkakaeqer lakeqadktk aeqerlakeq
      601 adktkaeqer lakeqadkak aeqerlakeq adktkaeqer lakeqadktk aeqerlakdq
      661 adkakaeqer lakeqadktk aeqerlakeq adktkaeqer lakdqadkak aeqerlakeq
      721 adktkaeqer lakeqadkvk aeqerlakeq adkakaeqer lakeqadika kekekeitkp
      781 siiiskpidi entyksmqlm aengykfmdm qqgqlrylas atcsvgaena cisgfthyqn
      841 lnktnatqtg lsgayrfdik niplvvglai dtdvssslpk gyqyqgyalp ligfsldlip
      901 slnaelnnna phfslkgayl nrkvsierpa lagtesgkgn arisgyhidf qtyypyslsd
      961 nllltsfvgi tfnqisrsay setqnaqfaa hydalkthsl fakmglgmeh llgssfilnt
     1021 kagllwnlsh yqgdfrshid ylgqqqidys enkkqvkqrp fanvgityqf dkqssvntsv
     1081 nwemttyrnh dmqigvsyty rf
//
LOCUS       WP_235909138             280 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase domain-containing protein [Brucella anthropi].
ACCESSION   WP_235909138
VERSION     WP_235909138.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019846.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08241.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..280
                     /product="methyltransferase domain-containing protein"
                     /GO_function="GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /calculated_mol_wt=31191
     Region          100..185
                     /region_name="Methyltransf_11"
                     /note="Methyltransferase domain; pfam08241"
                     /db_xref="CDD:462406"
ORIGIN      
        1 mlglnlklpd grelvisqhs lpspdlsrvy grsaaacrfn eriftgleta qmldatievc
       61 ladgsrleqp lsaadphdpv lvlvnrffde ihqcsnghml eigsrnrtga mwrerlpaaw
      121 qytgfdileg envdvvgdah eassflprnq fdavmsfavf ehllmpwkav iemnrvmkpg
      181 aigiilapqt wplheepcdy frfsrhswka llnratgfei ikavdgcday ivakvhnlat
      241 sfgefytgal msavffrktg etnldwpvsl sslgddlypm
//
LOCUS       WP_235909115             175 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: phosphotransferase [Gammaproteobacteria].
ACCESSION   WP_235909115
VERSION     WP_235909115.1
KEYWORDS    RefSeq.
SOURCE      Gammaproteobacteria (g-proteobacteria)
  ORGANISM  Gammaproteobacteria
            Bacteria; Pseudomonadati; Pseudomonadota.
REFERENCE   1  (residues 1 to 175)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 175)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Gammaproteobacteria"
                     /db_xref="taxon:1236"
     Protein         1..175
                     /product="phosphotransferase"
                     /calculated_mol_wt=20335
     Region          <1..174
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 mitkainakp isalfltdqe llaiykealn llnsvaiidc pfisnidhrl keskffidnq
       61 llddidqddf daelwgdhrt ylslwnelte trveerlvfs hgditdsnif idkfneiyfl
      121 dlgraglade fvdisfverc lredaseeta kiflkhlknd rpdkrnyflk ldeln
//
LOCUS       WP_235909165             160 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Brucella anthropi].
ACCESSION   WP_235909165
VERSION     WP_235909165.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02371.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..160
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=17460
     Region          <1..158
                     /region_name="COG3547"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442768"
ORIGIN      
        1 mlrartslrh elaglerqvr llakddavcr llmtmpgiga vvaltfrsav ddparfsssk
       61 kvgpwvgltp srnqsgerdv iggitragda nlrralcqaa tvmihrgrst wlrswaaqva
      121 krrgakramv alarrigtil hrmwtdgtef ssdrllaksa
//
LOCUS       WP_235909100             740 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tailspike protein [Proteus terrae].
ACCESSION   WP_235909100
VERSION     WP_235909100.1
KEYWORDS    RefSeq.
SOURCE      Proteus terrae
  ORGANISM  Proteus terrae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Proteus.
REFERENCE   1  (residues 1 to 740)
  AUTHORS   Steinbacher,S., Miller,S., Baxa,U., Budisa,N., Weintraub,A.,
            Seckler,R. and Huber,R.
  TITLE     Phage P22 tailspike protein: crystal structure of the head-binding
            domain at 2.3 A, fully refined structure of the endorhamnosidase at
            1.56 A resolution, and the molecular basis of O-antigen recognition
            and cleavage
  JOURNAL   J Mol Biol 267 (4), 865-880 (1997)
   PUBMED   9135118
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020577.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09008.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Proteus terrae"
                     /db_xref="taxon:1574161"
     Protein         1..740
                     /product="phage tailspike protein"
                     /calculated_mol_wt=82477
     Region          7..109
                     /region_name="Head_binding"
                     /note="Head binding; pfam09008"
                     /db_xref="CDD:401088"
     Region          652..705
                     /region_name="Peptidase_S74"
                     /note="Chaperone of endosialidase; pfam13884"
                     /db_xref="CDD:404724"
ORIGIN      
        1 msdiipnvvv smpsqlftla rkfqaasngk ifigkidtdp tlpenqiqvy lenedgphip
       61 vsqpliinqa gfpvyngqia kfvtveghsm avydsygaqq fyypnvlkyd pdqlkielss
      121 kngasligtk tgdtveerfs sieqevkest gksisnikif aelplrpagy gdilekynyk
      181 yiypqgmcff dddneiyitc sgvggdnnwa wiyvydrdsl slksifsagd tnseglyvtk
      241 idgdkylfil dyysgsgngk tgvyklpndi ssvnmtrlta ynvcntrqyf qiagynnqii
      301 iavnngessp qalqrrtkfn yydardllen ieptpigais vdkniekigk rqgiaitpng
      361 litsggaytp yggdvndeni fsfrmltfsg netgsllcdp nklcdqinph lkqkatrmen
      421 egcayldgin ytlnivlnvn deqsqfgglv ifehkasehe tgtincsesl slncmdnnnd
      481 tnidisttpy dklqnkrltt lrqildrmnr dgvqvyqfyn gtapyvtdin gmeitpscsv
      541 tiknfnsysy lvtvsgnrtn yqmfvtgdig gpytqhmdtl isspyekvrp eflsrpskiq
      601 gvnglpcdny ysnsntpltv aryysgdnss pvitgsiivd gdsgrtsfnt tsderlkidk
      661 geyidglyki lklinnnalr nfewkhngnn qyglmaqrvs dvipdavsyd edtdtymvny
      721 saiipdiisa iselynkink
//
LOCUS       WP_235909326             161 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein [Goekera deserti].
ACCESSION   WP_235909326
VERSION     WP_235909326.1
KEYWORDS    RefSeq.
SOURCE      Goekera deserti
  ORGANISM  Goekera deserti
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Geodermatophilales; Geodermatophilaceae; Goekera.
REFERENCE   1  (residues 1 to 161)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Goekera deserti"
                     /db_xref="taxon:2497753"
     Protein         1..161
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=16876
     Region          <1..157
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
ORIGIN      
        1 mgplyqagek ayvqalleqa rhtgaevrel ggqagdadls agnfprpslv lapaddtrvv
       61 leeqfgpslp vlpfddeava varandtpyg lcssvwtadp araatvarrl rsgctfvnah
      121 gaahlderap fgglghsgig remrveglre fmdphavgfp a
//
LOCUS       WP_235909436             186 aa            linear   BCT 02-MAR-2025
DEFINITION  SAV_6107 family HEPN domain-containing protein [Goekera deserti].
ACCESSION   WP_235909436
VERSION     WP_235909436.1
KEYWORDS    RefSeq.
SOURCE      Goekera deserti
  ORGANISM  Goekera deserti
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Geodermatophilales; Geodermatophilaceae; Goekera.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Anantharaman,V., Makarova,K.S., Burroughs,A.M., Koonin,E.V. and
            Aravind,L.
  TITLE     Comprehensive analysis of the HEPN superfamily: identification of
            novel roles in intra-genomic conflicts, defense, pathogenesis and
            RNA processing
  JOURNAL   Biol Direct 8, 15 (2013)
   PUBMED   23768067
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037499.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18726.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Goekera deserti"
                     /db_xref="taxon:2497753"
     Protein         1..186
                     /product="SAV_6107 family HEPN domain-containing protein"
                     /calculated_mol_wt=19501
     Region          38..135
                     /region_name="HEPN_SAV_6107"
                     /note="SAV_6107-like HEPN; pfam18726"
                     /db_xref="CDD:436694"
ORIGIN      
        1 mgarvlaeql plpvslparl paaaaqllgq ahrglaeaav cpdpgwryat ahlaalrgaa
       61 avlaartrpe agrrrprsaw vligqvapel gewaaffaag aakraaaeag lrhavterea
      121 ddlvrdagef lavaeaclgq rpapvrepes prespressr rvthlrpatp rraspvppsp
      181 adepgr
//
LOCUS       WP_235908918              77 aa            linear   BCT 02-MAR-2025
DEFINITION  GYF domain-containing protein [Roseiconus nitratireducens].
ACCESSION   WP_235908918
VERSION     WP_235908918.1
KEYWORDS    RefSeq.
SOURCE      Roseiconus nitratireducens
  ORGANISM  Roseiconus nitratireducens
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Roseiconus.
REFERENCE   1  (residues 1 to 77)
  AUTHORS   Agne,B., Kohler,D. and Baginsky,S.
  TITLE     Protein import-independent functions of Tic56, a component of the
            1-MDa translocase at the inner chloroplast envelope membrane
  JOURNAL   Plant Signal Behav 12 (3), e1284726 (2017)
   PUBMED   28125316
  REMARK    Correction to:[Addendum to: Kohler D, Helm S, Agne B, Baginsky S.
            Importance of translocon subunit Tic56 for rRNA processing and
            chloroplast ribosome assembly. Plant Physiol. 2016; 172: 2429-2444,
            PMID:27733515, http://dx.doi.org/10.1104/pp.16.01393.]
REFERENCE   2  (residues 1 to 77)
  AUTHORS   Kohler,D., Helm,S., Agne,B. and Baginsky,S.
  TITLE     Importance of Translocon Subunit Tic56 for rRNA Processing and
            Chloroplast Ribosome Assembly
  JOURNAL   Plant Physiol 172 (4), 2429-2444 (2016)
   PUBMED   27733515
REFERENCE   3  (residues 1 to 77)
  AUTHORS   Freeman,C.L., Hesketh,G. and Seaman,M.N.
  TITLE     RME-8 coordinates the activity of the WASH complex with the
            function of the retromer SNX dimer to control endosomal tubulation
  JOURNAL   J Cell Sci 127 (Pt 9), 2053-2070 (2014)
   PUBMED   24643499
REFERENCE   4  (residues 1 to 77)
  AUTHORS   Guo,L., Yu,Y., Law,J.A. and Zhang,X.
  TITLE     SET DOMAIN GROUP2 is the major histone H3 lysine [corrected] 4
            trimethyltransferase in Arabidopsis
  JOURNAL   Proc Natl Acad Sci U S A 107 (43), 18557-18562 (2010)
   PUBMED   20937886
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2010 Dec 21;107(51):22360]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025597.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14237.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Roseiconus nitratireducens"
                     /db_xref="taxon:2605748"
     Protein         1..77
                     /product="GYF domain-containing protein"
                     /calculated_mol_wt=8593
     Region          5..>42
                     /region_name="GYF_2"
                     /note="GYF domain 2; pfam14237"
                     /db_xref="CDD:464112"
ORIGIN      
        1 msaqwfymts gwlrkshrvg piseadller iekgqiapet lvqssktrnk wipmnkvgpa
       61 maawkrshpe aadqtad
//
LOCUS       WP_235909905             263 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Goekera deserti].
ACCESSION   WP_235909905
VERSION     WP_235909905.1
KEYWORDS    RefSeq.
SOURCE      Goekera deserti
  ORGANISM  Goekera deserti
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Geodermatophilales; Geodermatophilaceae; Goekera.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Goekera deserti"
                     /db_xref="taxon:2497753"
     Protein         1..263
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=27638
     Region          1..262
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(27,29..30,32,51..53,105..107,154..156,169,173,
                     199..202)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(130,156,169,173)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mdpkpdhgeq syqghgklag katvitggds gigravaiaf aregadvlia yldehedaee
       61 taryveqsgr ravlvpgdls drshaktiip raveefgrvd vlvnnaafqm thetldeisd
      121 eewdhtvatn ltamftlckd aiphmqpgas iinsssvnsd mpkpslapya mtkagianft
      181 aslaqmyadk giransvapg pvwtplipat mpaetvaefg qqtplgraaq paelapvyvl
      241 lasdeasyvs garvavtggt pil
//
LOCUS       WP_235909908              60 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Goekera deserti].
ACCESSION   WP_235909908
VERSION     WP_235909908.1
KEYWORDS    RefSeq.
SOURCE      Goekera deserti
  ORGANISM  Goekera deserti
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Geodermatophilales; Geodermatophilaceae; Goekera.
REFERENCE   1  (residues 1 to 60)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 60)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..60
                     /organism="Goekera deserti"
                     /db_xref="taxon:2497753"
     Protein         1..60
                     /product="VOC family protein"
                     /calculated_mol_wt=6105
     Region          <10..60
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mthdaaaavs vqvddvdaay apavtagaev vhpltdepwg vrrfvardpd gqvvnvlgha
//
LOCUS       WP_235909912              93 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-binding dehydrogenase [Goekera deserti].
ACCESSION   WP_235909912
VERSION     WP_235909912.1
KEYWORDS    RefSeq.
SOURCE      Goekera deserti
  ORGANISM  Goekera deserti
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Geodermatophilales; Geodermatophilaceae; Goekera.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024989.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13602.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Goekera deserti"
                     /db_xref="taxon:2497753"
     Protein         1..93
                     /product="zinc-binding dehydrogenase"
                     /calculated_mol_wt=10252
     Region          <1..92
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
ORIGIN      
        1 mipaffalva rlawwdllpn rhgasfynvw aghltrprrf rtrlradlta vlqlladgtl
       61 taqvaacfpl teaaqamqra eshtalgkvv lrp
//
LOCUS       WP_235910017             214 aa            linear   BCT 02-MAR-2025
DEFINITION  M15 family metallopeptidase [Goekera deserti].
ACCESSION   WP_235910017
VERSION     WP_235910017.1
KEYWORDS    RefSeq.
SOURCE      Goekera deserti
  ORGANISM  Goekera deserti
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Geodermatophilales; Geodermatophilaceae; Goekera.
REFERENCE   1  (residues 1 to 214)
  AUTHORS   Bussiere,D.E., Pratt,S.D., Katz,L., Severin,J.M., Holzman,T. and
            Park,C.H.
  TITLE     The structure of VanX reveals a novel amino-dipeptidase involved in
            mediating transposon-based vancomycin resistance
  JOURNAL   Mol Cell 2 (1), 75-84 (1998)
   PUBMED   9702193
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013586.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01427.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Goekera deserti"
                     /db_xref="taxon:2497753"
     Protein         1..214
                     /product="M15 family metallopeptidase"
                     /GO_function="GO:0008237 - metallopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0016805 - dipeptidase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=22131
     Region          34..186
                     /region_name="Peptidase_M15"
                     /note="Metalloproteases including zinc D-Ala-D-Ala
                     carboxypeptidase, L-Ala-D-Glu peptidase,
                     L,D-carboxypeptidase, bacteriophage endolysins, and
                     related proteins; cl38918"
                     /db_xref="CDD:453889"
ORIGIN      
        1 mllsdprvaa vpvvecgdpl vvlgpefgaa rarvraglad rlavaqallp agivlrvqeg
       61 hrtvadqrai iarytaevar aypgcpadeq rrlvsrfvsp vdvaphvaga avdltlarhd
      121 gsdldlgtai datpeasggr cataspdvda garalrdvlc ralggaglvn yptewwhwsy
      181 gdrywalvtg apaawygavd vngpapvala gvgr
//
LOCUS       WP_235910248             132 aa            linear   BCT 02-MAR-2025
DEFINITION  inorganic diphosphatase [Deinococcus kurensis].
ACCESSION   WP_235910248
VERSION     WP_235910248.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus kurensis
  ORGANISM  Deinococcus kurensis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012922.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00719.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Deinococcus kurensis"
                     /db_xref="taxon:2662757"
     Protein         1..132
                     /product="inorganic diphosphatase"
                     /GO_component="GO:0005737 - cytoplasm [Evidence IEA]"
                     /GO_function="GO:0000287 - magnesium ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA]"
                     /GO_process="GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /calculated_mol_wt=14180
     Region          <36..>87
                     /region_name="Pyrophosphatase"
                     /note="Inorganic pyrophosphatase; pfam00719"
                     /db_xref="CDD:459915"
ORIGIN      
        1 mrawrgvvew tagqrerfvw rggrleplrv earpapvnyg clpgtlnpad naevdavwlg
       61 eplavgtvre gipagllhlh dgdhkvifsg eplpgaalqg llawfpperg atvqdahaaq
      121 awlesltvvh sk
//
LOCUS       WP_235910275             321 aa            linear   BCT 02-MAR-2025
DEFINITION  excalibur calcium-binding domain-containing protein [Deinococcus
            kurensis].
ACCESSION   WP_235910275
VERSION     WP_235910275.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus kurensis
  ORGANISM  Deinococcus kurensis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
REFERENCE   1  (residues 1 to 321)
  AUTHORS   Rigden,D.J., Jedrzejas,M.J. and Galperin,M.Y.
  TITLE     An extracellular calcium-binding domain in bacteria with a distant
            relationship to EF-hands
  JOURNAL   FEMS Microbiol Lett 221 (1), 103-110 (2003)
   PUBMED   12694917
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017691.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05901.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Deinococcus kurensis"
                     /db_xref="taxon:2662757"
     Protein         1..321
                     /product="excalibur calcium-binding domain-containing
                     protein"
                     /calculated_mol_wt=33253
     Region          <86..>247
                     /region_name="Peptidase_M8"
                     /note="Leishmanolysin; cl19482"
                     /db_xref="CDD:388572"
     Region          <298..320
                     /region_name="Excalibur"
                     /note="Excalibur calcium-binding domain; pfam05901"
                     /db_xref="CDD:428664"
ORIGIN      
        1 mktwwqgval agallgagqa gavpaepfgi evrflgaplg aaqrsavnea arrvsalias
       61 pfepvrvdvp tgecdrglpa lrgrltrlvv fvrvkrlddd lyatgmpcdl hdgsflpiyg
      121 vvdlnssgls elprtdvldt miheflhvlg vgtlwerdar isvsgdqddr vfvkrqgktt
      181 lyvapravaa fralggkgag ipldpdrghw agevvcsevl sgssgdytgr lnpvspltlg
      241 aledlgyrvq argaapfrlp vgacpvdaga adapagvavp pggftscaaa rsagaalplr
      301 rgqpgyrpgl dgdgdglace r
//
LOCUS       WP_235910317             400 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Deinococcus kurensis].
ACCESSION   WP_235910317
VERSION     WP_235910317.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus kurensis
  ORGANISM  Deinococcus kurensis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Deinococcus kurensis"
                     /db_xref="taxon:2662757"
     Protein         1..400
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=41421
     Region          49..391
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(73,123..124,126..128,131,151,154..155,158,226,
                     229..230,233..235,238,265,269,318..319,323,327,343,
                     346..347,350..351,354)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mtprrsltdr lplrpetlgp llaamvtlat aevvrsgvyg gyltqavdth fglplalggl
       61 aytvhfatdt vmrgpagvai sryglratml ggallsvlai tlfmvahtsw lfllaaalhg
      121 vgfavmwpgt mnfaadaard gyhgraltlv gtaitpfsgl gfllfgalak rddnvpllva
      181 lalltlgtll allvparrvl krreeteepp rarsvtgalv pllpaafmqt mtmsllgpll
      241 friapdlgln ywglvallvv gggvafgsmp ltgrfadrgr arlgvmigyg llslgflgfa
      301 ttpavwalyl laalaglgya fltpawaalv thvlpaeqrp aawgvlmtve nggmalgpli
      361 gtfalgqmgv pgpfvvgavl aavtaggyaa fgrafrgaat
//
LOCUS       WP_235910315             238 aa            linear   BCT 02-MAR-2025
DEFINITION  polysaccharide deacetylase family protein [Deinococcus kurensis].
ACCESSION   WP_235910315
VERSION     WP_235910315.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus kurensis
  ORGANISM  Deinococcus kurensis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
REFERENCE   1  (residues 1 to 238)
  AUTHORS   Freiberg,C., Fellay,R., Bairoch,A., Broughton,W.J., Rosenthal,A.
            and Perret,X.
  TITLE     Molecular basis of symbiosis between Rhizobium and legumes
  JOURNAL   Nature 387 (6631), 394-401 (1997)
   PUBMED   9163424
REFERENCE   2  (residues 1 to 238)
  AUTHORS   Mishra,C., Semino,C.E., McCreath,K.J., de la Vega,H., Jones,B.J.,
            Specht,C.A. and Robbins,P.W.
  TITLE     Cloning and expression of two chitin deacetylase genes of
            Saccharomyces cerevisiae
  JOURNAL   Yeast 13 (4), 327-336 (1997)
   PUBMED   9133736
REFERENCE   3  (residues 1 to 238)
  AUTHORS   Millward-Sadler,S.J., Poole,D.M., Henrissat,B., Hazlewood,G.P.,
            Clarke,J.H. and Gilbert,H.J.
  TITLE     Evidence for a general role for high-affinity non-catalytic
            cellulose binding domains in microbial plant cell wall hydrolases
  JOURNAL   Mol Microbiol 11 (2), 375-382 (1994)
   PUBMED   8170399
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013672.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01522.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Deinococcus kurensis"
                     /db_xref="taxon:2662757"
     Protein         1..238
                     /product="polysaccharide deacetylase family protein"
                     /GO_function="GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=25768
     Region          42..193
                     /region_name="CE4_SF"
                     /note="Catalytic NodB homology domain of the carbohydrate
                     esterase 4 superfamily; cl15692"
                     /db_xref="CDD:472828"
ORIGIN      
        1 marrrnplgg falllapall aevlgraagw galghgprdr wrvavtfddg psertpellr
       61 vlarygargt ffvtrpaaqa hpdlldaiea aghtldahgi whrtaltlap wqewaqvawh
      121 prparpgphl yrppygghsp ltrafarlsg rqvalwdteg rdwtaedaqa laaqtlarvr
      181 pgsvillhdg pavtpallga lltgleargl evvpmhelpa rritlreglt rlrssyga
//
LOCUS       WP_235910328             288 aa            linear   BCT 02-MAR-2025
DEFINITION  CAP domain-containing protein [Deinococcus kurensis].
ACCESSION   WP_235910328
VERSION     WP_235910328.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus kurensis
  ORGANISM  Deinococcus kurensis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
REFERENCE   1  (residues 1 to 288)
  AUTHORS   Gibbs,G.M., Roelants,K. and O'Bryan,M.K.
  TITLE     The CAP superfamily: cysteine-rich secretory proteins, antigen 5,
            and pathogenesis-related 1 proteins--roles in reproduction, cancer,
            and immune defense
  JOURNAL   Endocr Rev 29 (7), 865-897 (2008)
   PUBMED   18824526
REFERENCE   2  (residues 1 to 288)
  AUTHORS   Milne,T.J., Abbenante,G., Tyndall,J.D., Halliday,J. and Lewis,R.J.
  TITLE     Isolation and characterization of a cone snail protease with
            homology to CRISP proteins of the pathogenesis-related protein
            superfamily
  JOURNAL   J Biol Chem 278 (33), 31105-31110 (2003)
   PUBMED   12759345
REFERENCE   3  (residues 1 to 288)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
REFERENCE   4  (residues 1 to 288)
  AUTHORS   Fernandez,C., Szyperski,T., Bruyere,T., Ramage,P., Mosinger,E. and
            Wuthrich,K.
  TITLE     NMR solution structure of the pathogenesis-related protein P14a
  JOURNAL   J Mol Biol 266 (3), 576-593 (1997)
   PUBMED   9067611
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012415.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00188.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Deinococcus kurensis"
                     /db_xref="taxon:2662757"
     Protein         1..288
                     /product="CAP domain-containing protein"
                     /calculated_mol_wt=28807
     Region          60..116
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); pfam02368"
                     /db_xref="CDD:396788"
     Region          150..288
                     /region_name="YkwD"
                     /note="Spore germination protein YkwD and related proteins
                     with CAP (CSP/antigen 5/PR1) domain [Cell cycle control,
                     cell division, chromosome partitioning, General function
                     prediction only]; COG2340"
                     /db_xref="CDD:441910"
ORIGIN      
        1 mptallrgga aallaltlaa cgsttspsag spsagtpgag tsapaepaqg trlaaqavat
       61 pvalsagqtq qlnvtvngqp aqpgqlrwtt snaavatvtq tglvtavaag satvraalat
      121 npgayldfpv tvaavtapap apapapttps afaqqvldlt naaravprsc gatsyaaaap
      181 ltwnaqlgqa aqghaadmat qnyfshtsld grtfaqrivn agytayrtlg eniaagqttp
      241 qavvdgwlks eghcrnlmnp afrelgvgya ysgastykhy wvqdfgar
//
LOCUS       WP_235910393             539 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Deinococcus kurensis].
ACCESSION   WP_235910393
VERSION     WP_235910393.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus kurensis
  ORGANISM  Deinococcus kurensis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
REFERENCE   1  (residues 1 to 539)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 539)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 539)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 539)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Deinococcus kurensis"
                     /db_xref="taxon:2662757"
     Protein         1..539
                     /product="ATP-binding protein"
                     /calculated_mol_wt=56965
     Region          25..533
                     /region_name="PRK11086"
                     /note="sensory histidine kinase DcuS; Provisional"
                     /db_xref="CDD:236839"
ORIGIN      
        1 malrlplpsr vpslareval phtprllrvg prlflttlga flvlglpvag lvsqgvydgi
       61 hrsfaerslr esrlvaalpp vvaalsgnaa eranlnalmn ryrdqlgady vvvtdrdarr
      121 lthpnpaqvg qrmqggdfta flrgrsvtet vqgtlgrsvr skvpivdgag rvlglasvgf
      181 llprlrdvfl dvlraglpwy llalalalal algvarrvkt emlglepeqi agglrqyrav
      241 lntleegvlv aragqvfvmn pqarallgtp daalplpwpp glplpvpgag pvtaevagrp
      301 vllaaqeage gavvvtlrdl arvraladel tqsqryadll raqtheftnr lhtlagllhl
      361 getrealali haqsarheah lqavgalrhv rlsalllgkf draaelgvtl tldplsalpg
      421 tlppgvldll elaagnlien aldaaqghpd aevrvliatd peglilevrd tgpgvppala
      481 etltargvss kgagrgvgla lvadraqslg aalshdrvra dgqewtrftl dvplpeaee
//
LOCUS       WP_235910404             333 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Deinococcus kurensis].
ACCESSION   WP_235910404
VERSION     WP_235910404.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus kurensis
  ORGANISM  Deinococcus kurensis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024911.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13521.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Deinococcus kurensis"
                     /db_xref="taxon:2662757"
     Protein         1..333
                     /product="AAA family ATPase"
                     /calculated_mol_wt=36667
     Region          8..158
                     /region_name="nt_trans"
                     /note="nucleotidyl transferase superfamily; cl00015"
                     /db_xref="CDD:469580"
     Site            order(19..22,138..141)
                     /site_type="active"
                     /db_xref="CDD:173912"
     Site            order(19,22,139)
                     /site_type="other"
                     /note="nucleotide binding site [chemical binding]"
                     /db_xref="CDD:173912"
     Site            19..22
                     /site_type="other"
                     /note="HIGH motif"
                     /db_xref="CDD:173912"
     Site            138..141
                     /site_type="other"
                     /note="KMSKS motif"
                     /db_xref="CDD:173912"
     Region          155..331
                     /region_name="NadR3"
                     /note="Nicotinamide riboside kinase [Coenzyme transport
                     and metabolism]; COG3172"
                     /db_xref="CDD:442405"
ORIGIN      
        1 mtdrryrhgl vvgkfaplhr ghmhlldeal arcervsvwv ysrpdfpdmp splrrgwvrs
       61 lyparlcpgl dllpdapnpp lneapdathr ayvrgvlddw gvrpdavfts eaygeafaas
      121 lgaahvcvdr araavpvsgs alradvhglr gfleplvyah fvrrvvilga estgkstltr
      181 alaedfgtag vceygrdvye rengalgpah fleiarghra ledeaitspg vhrwvfsdtd
      241 aattlmwshl ltggarpelr aladecrsry ahaflcdtdl pheqdgwran tevravqqaf
      301 irqdleargv pftllrgsvp ervaqvravl gdr
//
LOCUS       WP_235910395             417 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Deinococcus kurensis].
ACCESSION   WP_235910395
VERSION     WP_235910395.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus kurensis
  ORGANISM  Deinococcus kurensis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Deinococcus kurensis"
                     /db_xref="taxon:2662757"
     Protein         1..417
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=43794
     Region          23..389
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(29..30,33..34,37,69,119..120,122..124,127,147,
                     150..151,154,234..235,238..240,243,271,275,324..325,329,
                     333,349,352..353,356..357,360)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 msgelrpqrg qtwrfsrqvw lylssvfafg lsqaftalfl nfylralglg aewqgvlnal
       61 paitlaclsl pavavarris nahalkvgaa lnllglgllv langpllviv gaviqgagga
      121 lsmvaaspfm annsdersrv tlfsvqnalm tgagflgnll ggqiptlyaq sagtapdalg
      181 alraallvaa alqligllpv lwlrptgktk ptgrsfhvrd ratmarlvlp nilvglgaga
      241 tipflnvfie gkfsvsyagl gtlfawtsla taatallqpl lvrrmgqlqa vlvvqacslp
      301 flavlgfapq lwmvtaalft rgalmnaagp vysayamtal peedrpmysa vnliawdlgw
      361 aissilsgvv rgalpfstaf nalfawtllm ygasvlaiyl glyrraqrtp tpapitp
//
LOCUS       WP_235910432             419 aa            linear   BCT 02-MAR-2025
DEFINITION  C39 family peptidase [Deinococcus kurensis].
ACCESSION   WP_235910432
VERSION     WP_235910432.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus kurensis
  ORGANISM  Deinococcus kurensis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024919.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13529.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Deinococcus kurensis"
                     /db_xref="taxon:2662757"
     Protein         1..419
                     /product="C39 family peptidase"
                     /calculated_mol_wt=44999
     Region          107..224
                     /region_name="Peptidase_C39_2"
                     /note="Peptidase_C39 like family; pfam13529"
                     /db_xref="CDD:379241"
     Region          256..>416
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          342..370
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          375..405
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mrspallvta allvgaaafg vtrlqssada qtaavhqaav palppgaepa pdtptpvepe
       61 ptpepspape pvtptpvqvq pptpevtpas ppaaparvlp arasvtgvrh eyqrlnncgp
      121 vtigmalsrw gsalnqydia pklkpskgdv nvspeelaaf araqgmdvhl arggdrtllr
      181 sllasgfpvi vetwfvtpds ggmghyrllt gyddgagqfs aldsylgplr mdyakfdelw
      241 rsfgrtyliv tppskraala gvldwradra qeqaetlrva ereaerrnda vgfltlgqaq
      301 ldagdaraaa rtfdrafaat pdraldptrp awvqgglpwr alwysfgple aytrtgqytr
      361 vltltgavlr svptheeahy wraraltglg rtaeaqaayr ealhlrpgya earqelnrl
//
LOCUS       WP_235910441             186 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin-dependent oxidoreductase [Deinococcus kurensis].
ACCESSION   WP_235910441
VERSION     WP_235910441.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus kurensis
  ORGANISM  Deinococcus kurensis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Kisker,C., Schindelin,H., Pacheco,A., Wehbi,W.A., Garrett,R.M.,
            Rajagopalan,K.V., Enemark,J.H. and Rees,D.C.
  TITLE     Molecular basis of sulfite oxidase deficiency from the structure of
            sulfite oxidase
  JOURNAL   Cell 91 (7), 973-983 (1997)
   PUBMED   9428520
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012401.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00174.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Deinococcus kurensis"
                     /db_xref="taxon:2662757"
     Protein         1..186
                     /product="molybdopterin-dependent oxidoreductase"
                     /calculated_mol_wt=20250
     Region          38..182
                     /region_name="COG3915"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:443120"
ORIGIN      
        1 mtplhparva lsvlllhpal lhtaaaqtwg spaswkpfsy araaqptpar kpgektllal
       61 dgttgtlklt lrqlqampai rytvlhrqlk qtftyqgvtl rdlaarggfa gkdlrvyaan
      121 gyfttiradd ymnepimlay sadgqpittl qkgpltvvlp aqparlngpe ygaawvwyve
      181 riaplk
//
LOCUS       WP_235910454             362 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4097 family beta strand repeat-containing protein [Deinococcus
            kurensis].
ACCESSION   WP_235910454
VERSION     WP_235910454.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus kurensis
  ORGANISM  Deinococcus kurensis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024743.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13349.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Deinococcus kurensis"
                     /db_xref="taxon:2662757"
     Protein         1..362
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /calculated_mol_wt=37505
     Region          97..301
                     /region_name="YvlB"
                     /note="Uncharacterized conserved protein YvlB, contains
                     DUF4097 and DUF4098 domains [Function unknown]; COG3595"
                     /db_xref="CDD:442814"
ORIGIN      
        1 mttvppsrpl aptlgrmawg lllasagfvl vwqgsgrtlt pgmsvqdtpi svlldgplpl
       61 dlassaavna sgdrsdltvt plpggseyal rgrahhrarn pvqadvtrqg raitasvsln
      121 vqplrergvi isgpegmqht ldlalsrdlp vtlststasg dqhltltplr lraltvrsds
      181 gdqtlslpar eagavsavsr sgavtltapr gsltdalrvn tssgdqtlnl tglttqtlgi
      241 gtdsgdvrmt lpaitgrgtv ttgsgdirlt attrtrgtld vrtqsghvtl ilppgltarv
      301 rypdrdtqtf ppgqppspap dldvfvdgra vnvnpsqaqd daraggtapa ptdstptrpf
      361 rr
//
LOCUS       WP_235910464             448 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome P450 [Deinococcus kurensis].
ACCESSION   WP_235910464
VERSION     WP_235910464.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus kurensis
  ORGANISM  Deinococcus kurensis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
REFERENCE   1  (residues 1 to 448)
  AUTHORS   Werck-Reichhart,D. and Feyereisen,R.
  TITLE     Cytochromes P450: a success story
  JOURNAL   Genome Biol 1 (6), REVIEWS3003 (2000)
   PUBMED   11178272
REFERENCE   2  (residues 1 to 448)
  AUTHORS   Graham-Lorence,S., Amarneh,B., White,R.E., Peterson,J.A. and
            Simpson,E.R.
  TITLE     A three-dimensional model of aromatase cytochrome P450
  JOURNAL   Protein Sci 4 (6), 1065-1080 (1995)
   PUBMED   7549871
REFERENCE   3  (residues 1 to 448)
  AUTHORS   Degtyarenko,K.N. and Archakov,A.I.
  TITLE     Molecular evolution of P450 superfamily and P450-containing
            monooxygenase systems
  JOURNAL   FEBS Lett 332 (1-2), 1-8 (1993)
   PUBMED   8405421
REFERENCE   4  (residues 1 to 448)
  AUTHORS   Nelson,D.R., Kamataki,T., Waxman,D.J., Guengerich,F.P.,
            Estabrook,R.W., Feyereisen,R., Gonzalez,F.J., Coon,M.J.,
            Gunsalus,I.C., Gotoh,O. et al.
  TITLE     The P450 superfamily: update on new sequences, gene mapping,
            accession numbers, early trivial names of enzymes, and nomenclature
  JOURNAL   DNA Cell Biol 12 (1), 1-51 (1993)
   PUBMED   7678494
REFERENCE   5  (residues 1 to 448)
  AUTHORS   Guengerich,F.P.
  TITLE     Reactions and significance of cytochrome P-450 enzymes
  JOURNAL   J Biol Chem 266 (16), 10019-10022 (1991)
   PUBMED   2037557
REFERENCE   6  (residues 1 to 448)
  AUTHORS   Nebert,D.W. and Gonzalez,F.J.
  TITLE     P450 genes: structure, evolution, and regulation
  JOURNAL   Annu Rev Biochem 56, 945-993 (1987)
   PUBMED   3304150
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00067.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Deinococcus kurensis"
                     /db_xref="taxon:2662757"
     Protein         1..448
                     /product="cytochrome P450"
                     /GO_function="GO:0004497 - monooxygenase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=48231
     Region          38..442
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(95,99,106,153,260..261,264..265,268..269,272,322,
                     331,333,356,389..391,395..399,402..403)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410713"
     Site            order(177..178,260,263..264,268,329..332)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410713"
ORIGIN      
        1 mtapsplppg prtsplrsal dlrrdplgyl rhlraaygda frvrigprev lmvthpdaar
       61 evlvtqaakf rkgrgiqkmq dflgtgllta egqtwrthrr lmqpsfhraa lsgmaqdivq
      121 atrpthaalv gaadsgagle vggemlrvtl ravasvlfgt gltdeelavv eaelpplldh
      181 tasrvravvd lprwlptpaa qrsaaasral daivariiat rraeqeagtp gndllgllla
      241 ardeegggls drelrdevmt lflaghetta ntltflllll srhpevqgrv qaelrgvlgd
      301 cdptaadlpr lpllhaciqe tlrlyppawl vprqatapvr vagfdlpega avsvciyllq
      361 rhaaywpdph afvpdrwlrg ertsdafmpf glgprmcign nlalmeagli aalllrdvrv
      421 tvpdggptgl hagvtlrpdg pvtavfhr
//
LOCUS       WP_417281875             163 aa            linear   BCT 02-MAR-2025
DEFINITION  sensor histidine kinase [Amnibacterium flavum].
ACCESSION   WP_417281875
VERSION     WP_417281875.1
KEYWORDS    RefSeq.
SOURCE      Amnibacterium flavum
  ORGANISM  Amnibacterium flavum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Amnibacterium.
REFERENCE   1  (residues 1 to 163)
  AUTHORS   Dutta,R. and Inouye,M.
  TITLE     GHKL, an emergent ATPase/kinase superfamily
  JOURNAL   Trends Biochem Sci 25 (1), 24-28 (2000)
   PUBMED   10637609
REFERENCE   2  (residues 1 to 163)
  AUTHORS   Stock,J.
  TITLE     Signal transduction: Gyrating protein kinases
  JOURNAL   Curr Biol 9 (10), R364-R367 (1999)
   PUBMED   10339418
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11472026
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Amnibacterium flavum"
                     /db_xref="taxon:2173173"
     Protein         1..163
                     /product="sensor histidine kinase"
                     /EC_number="2.7.13.3"
                     /GO_function="GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=16867
     Region          <1..157
                     /region_name="WalK"
                     /note="Sensor histidine kinase WalK [Signal transduction
                     mechanisms]; COG5002"
                     /db_xref="CDD:444026"
ORIGIN      
        1 mlvlaradet tlgptgravd lddivlaear rirdltsiav gtadvaparv ggdegtlgqv
       61 vrnlvdnaar harsrieltl tdgvllavdd dgdgippeer eriferfvrl ddarsrdagg
      121 sglglaivre ivaahggsva vstgrlggar fevrlpapaq sag
//
LOCUS       WP_235910490             568 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphodiester glycosidase family protein [Deinococcus kurensis].
ACCESSION   WP_235910490
VERSION     WP_235910490.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus kurensis
  ORGANISM  Deinococcus kurensis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
REFERENCE   1  (residues 1 to 568)
  AUTHORS   Das,D., Lee,W.S., Grant,J.C., Chiu,H.J., Farr,C.L., Vance,J.,
            Klock,H.E., Knuth,M.W., Miller,M.D., Elsliger,M.A., Deacon,A.M.,
            Godzik,A., Lesley,S.A., Kornfeld,S. and Wilson,I.A.
  TITLE     Structure and function of the DUF2233 domain in bacteria and in the
            human mannose 6-phosphate uncovering enzyme
  JOURNAL   J Biol Chem 288 (23), 16789-16799 (2013)
   PUBMED   23572527
REFERENCE   2  (residues 1 to 568)
  AUTHORS   Kang,C., Riazuddin,S., Mundorff,J., Krasnewich,D., Friedman,P.,
            Mullikin,J.C. and Drayna,D.
  TITLE     Mutations in the lysosomal enzyme-targeting pathway and persistent
            stuttering
  JOURNAL   N Engl J Med 362 (8), 677-685 (2010)
   PUBMED   20147709
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021507.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09992.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Deinococcus kurensis"
                     /db_xref="taxon:2662757"
     Protein         1..568
                     /product="phosphodiester glycosidase family protein"
                     /calculated_mol_wt=57977
     Region          <434..557
                     /region_name="NAGPA"
                     /note="Sugar-P-sugar glycosidase (uncovering enzyme, UCE),
                     NAGPA superfamily [Carbohydrate transport and metabolism];
                     COG4632"
                     /db_xref="CDD:443670"
ORIGIN      
        1 mlplwtlprl gvtvrndpvd vrlllgtrel ryapatgwra vgftlsaklp apqltggslf
       61 vpltalnalg lqvladtpal ldfaapasvp aatlppspdl gqtpapgptp gtapapaptp
      121 splpqplptf tvnldtvrvs rtlhrtvevq rvvlelsgaa aasvarlqng ltvtlsgvsv
      181 tpgtqtlesg dtltltqspq gavvglttgg grseiftlnn pervvidttt yldgavpppv
      241 dpdalpdgva yrqlgglhll sfdparyqpr vvsaptgqas gvadlvkrvg gvagvnggyf
      301 dpgthlpvdl vamgglmtap slekratlgf taqgdtlfgy prpryvlsga gfsvtvnsvr
      361 akadpsllta fvgdgrtrvg adrlttllva pgaaavgsal sgvvtppagt laftfdparf
      421 pqlprtagap ltatlnwrad ggwdaatdal sagpllvqgg rvaldpareg fntaasiwrp
      481 trqvafgtla gqptiafleh gspeafaaal akagvrdavr ldsgssataf vtggyanlgg
      541 ylntvwsrpv pnaivlvpra daapaarr
//
LOCUS       WP_235910527              98 aa            linear   BCT 02-MAR-2025
DEFINITION  BCCT family transporter [Deinococcus kurensis].
ACCESSION   WP_235910527
VERSION     WP_235910527.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus kurensis
  ORGANISM  Deinococcus kurensis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
REFERENCE   1  (residues 1 to 98)
  AUTHORS   Jung,H., Buchholz,M., Clausen,J., Nietschke,M., Revermann,A.,
            Schmid,R. and Jung,K.
  TITLE     CaiT of Escherichia coli, a new transporter catalyzing
            L-carnitine/gamma -butyrobetaine exchange
  JOURNAL   J Biol Chem 277 (42), 39251-39258 (2002)
   PUBMED   12163501
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02028.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Deinococcus kurensis"
                     /db_xref="taxon:2662757"
     Protein         1..98
                     /product="BCCT family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0071705 - nitrogen compound transport
                     [Evidence IEA]"
                     /calculated_mol_wt=9975
     Region          <35..63
                     /region_name="BCCT"
                     /note="betaine/carnitine/choline family transporter;
                     pfam02028"
                     /db_xref="CDD:460420"
ORIGIN      
        1 mssrlphlvq ltsadvcagq iafalllsgr lsglqnasiv aalpfsdvtl tmcvsllkal
       61 reerpsethp araaavpalp gdsdrsaaqp aerevagg
//
LOCUS       WP_235910559             256 aa            linear   BCT 02-MAR-2025
DEFINITION  urease accessory protein UreD [Deinococcus kurensis].
ACCESSION   WP_235910559
VERSION     WP_235910559.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus kurensis
  ORGANISM  Deinococcus kurensis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
REFERENCE   1  (residues 1 to 256)
  AUTHORS   Farrugia,M.A., Wang,B., Feig,M. and Hausinger,R.P.
  TITLE     Mutational and Computational Evidence That a Nickel-Transfer Tunnel
            in UreD Is Used for Activation of Klebsiella aerogenes Urease
  JOURNAL   Biochemistry 54 (41), 6392-6401 (2015)
   PUBMED   26401965
REFERENCE   2  (residues 1 to 256)
  AUTHORS   Farrugia,M.A., Macomber,L. and Hausinger,R.P.
  TITLE     Biosynthesis of the urease metallocenter
  JOURNAL   J Biol Chem 288 (19), 13178-13185 (2013)
   PUBMED   23539618
REFERENCE   3  (residues 1 to 256)
  AUTHORS   Moncrief,M.B. and Hausinger,R.P.
  TITLE     Characterization of UreG, identification of a UreD-UreF-UreG
            complex, and evidence suggesting that a nucleotide-binding site in
            UreG is required for in vivo metallocenter assembly of Klebsiella
            aerogenes urease
  JOURNAL   J Bacteriol 179 (13), 4081-4086 (1997)
   PUBMED   9209019
REFERENCE   4  (residues 1 to 256)
  AUTHORS   Neyrolles,O., Ferris,S., Behbahani,N., Montagnier,L. and
            Blanchard,A.
  TITLE     Organization of Ureaplasma urealyticum urease gene cluster and
            expression in a suppressor strain of Escherichia coli
  JOURNAL   J Bacteriol 178 (3), 647-655 (1996)
   PUBMED   8550495
  REMARK    Erratum:[J Bacteriol. 1996 May;178(9):2725. doi:
            10.1128/jb.178.9.2725-2725.1996.. PMID: 8626347]
REFERENCE   5  (residues 1 to 256)
  AUTHORS   Park,I.S., Carr,M.B. and Hausinger,R.P.
  TITLE     In vitro activation of urease apoprotein and role of UreD as a
            chaperone required for nickel metallocenter assembly
  JOURNAL   Proc Natl Acad Sci U S A 91 (8), 3233-3237 (1994)
   PUBMED   7909161
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10002853
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Deinococcus kurensis"
                     /db_xref="taxon:2662757"
     Protein         1..256
                     /product="urease accessory protein UreD"
                     /GO_function="GO:0016151 - nickel cation binding [Evidence
                     IEA]"
                     /GO_process="GO:0008152 - metabolic process [Evidence
                     IEA]"
                     /calculated_mol_wt=26861
     Region          2..255
                     /region_name="UreH"
                     /note="Urease accessory protein UreH [Posttranslational
                     modification, protein turnover, chaperones]; COG0829"
                     /db_xref="CDD:440591"
ORIGIN      
        1 mlhlhfgmrg grtallrdtq kaplmvirpf elpcgtlmvf vvnptggvlg gdhaeirvtv
       61 gagarvlilt qsatrvqpsa dgrpatqdir fqveagarle fhpertipfa gsafrqtlta
      121 dlesgaqfgl tetlaagrvq agerlafasy esrvqvsvag rrvyldrqrl vpgadtrapg
      181 vwggrdyhaa gvfvggeapa elpavpgvla sgrsaggatw vrgvtargpq ldaalasare
      241 alraglwgaa plrvrr
//
LOCUS       WP_235910566             539 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF885 family protein [Deinococcus kurensis].
ACCESSION   WP_235910566
VERSION     WP_235910566.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus kurensis
  ORGANISM  Deinococcus kurensis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017745.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05960.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Deinococcus kurensis"
                     /db_xref="taxon:2662757"
     Protein         1..539
                     /product="DUF885 family protein"
                     /calculated_mol_wt=58977
     Region          20..527
                     /region_name="DUF885"
                     /note="Bacterial protein of unknown function (DUF885);
                     cl19872"
                     /db_xref="CDD:473242"
ORIGIN      
        1 mtdphdqara ylrvhaqlrp vdatfmglpg hdhqlppagp davsaeratl ealqadlahm
       61 rapqtaaeri daqlvsaqlt talaeldrap rqhspawytg eaafgvisll lpghlddpev
      121 trdalrvrle aipaflaqar ahlqgrarpd dvaerarrea raaahllstg lprhplwndt
      181 lrlpagraar allayaedls gpeapvacge ahldllmrvt halpfgprea lerateafar
      241 ltarleaqar glpgdmhwte hlarlearvp egdllgtyre lhgraldaar plltpaddyg
      301 ldfaflpewa egsgdlyflf yrspaplrpg tgsrywvtpp gpdpadrrah ncafvklvha
      361 vhhgsighht hnararqads vlarvagtdc asgiallgag tmvegwacya edllaeipgf
      421 ytpaeelllt qferrnaasc ivdlklhlge wtleqarafy rdeahfapar iwaettrnal
      481 fpasrlmywl gtetikalra elalpprtfh dallahghap atvvadelra qyrqgalhr
//
LOCUS       WP_235910473             248 aa            linear   BCT 02-MAR-2025
DEFINITION  glucodextranase DOMON-like domain-containing protein [Deinococcus
            kurensis].
ACCESSION   WP_235910473
VERSION     WP_235910473.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus kurensis
  ORGANISM  Deinococcus kurensis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
REFERENCE   1  (residues 1 to 248)
  AUTHORS   Mizuno,M., Tonozuka,T., Suzuki,S., Uotsu-Tomita,R., Kamitori,S.,
            Nishikawa,A. and Sakano,Y.
  TITLE     Structural insights into substrate specificity and function of
            glucodextranase
  JOURNAL   J Biol Chem 279 (11), 10575-10583 (2004)
   PUBMED   14660574
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021500.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09985.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Deinococcus kurensis"
                     /db_xref="taxon:2662757"
     Protein         1..248
                     /product="glucodextranase DOMON-like domain-containing
                     protein"
                     /calculated_mol_wt=25506
     Region          11..218
                     /region_name="DOMON_like"
                     /note="Domon-like ligand-binding domains; cl14783"
                     /db_xref="CDD:472705"
     Site            order(76,106,154)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:187675"
ORIGIN      
        1 mlallasqaq ltdpagdarg dggyvlptrp pftaemldlr alstkgtpqg mqftvtygqm
       61 gnpwnapggf sagvtdifvk galggqatlg dlglrtsggg wqyhlrvspg gstltevdaq
      121 grerplaapt vqvsgtnliv qtavpegryg ywvtnsvysp ltrdgvlrpt ttpgasalqa
      181 gradapvpvd vmaapgdtqa ytrgtlapvg etrdlvgigl lalgvvglli tviatvavwr
      241 rlnarvkp
//
LOCUS       WP_235910592             142 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2726 domain-containing protein [Deinococcus kurensis].
ACCESSION   WP_235910592
VERSION     WP_235910592.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus kurensis
  ORGANISM  Deinococcus kurensis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022337.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10881.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Deinococcus kurensis"
                     /db_xref="taxon:2662757"
     Protein         1..142
                     /product="DUF2726 domain-containing protein"
                     /calculated_mol_wt=15769
     Region          10..131
                     /region_name="PDDEXK_nuclease-like"
                     /note="PDDEXK family nucleases; cl40440"
                     /db_xref="CDD:477358"
ORIGIN      
        1 mpdqlpvrtk qyflarseva flaaleaslp ggyrvfpnvr lndlffittr hpgqqkgaya
       61 rlrdkhvdfl vvalpehrpv faieldgash dnaqqqyrda vkdvafrsag lplirlraev
      121 qyspaslrta lsehlsigha ha
//
LOCUS       WP_235910599             362 aa            linear   BCT 02-MAR-2025
DEFINITION  heparan-alpha-glucosaminide N-acetyltransferase domain-containing
            protein [Deinococcus kurensis].
ACCESSION   WP_235910599
VERSION     WP_235910599.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus kurensis
  ORGANISM  Deinococcus kurensis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
REFERENCE   1  (residues 1 to 362)
  AUTHORS   Durand,S., Feldhammer,M., Bonneil,E., Thibault,P. and
            Pshezhetsky,A.V.
  TITLE     Analysis of the biogenesis of heparan sulfate
            acetyl-CoA:alpha-glucosaminide N-acetyltransferase provides
            insights into the mechanism underlying its complete deficiency in
            mucopolysaccharidosis IIIC
  JOURNAL   J Biol Chem 285 (41), 31233-31242 (2010)
   PUBMED   20650889
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019403.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07786.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Deinococcus kurensis"
                     /db_xref="taxon:2662757"
     Protein         1..362
                     /product="heparan-alpha-glucosaminide N-acetyltransferase
                     domain-containing protein"
                     /calculated_mol_wt=37280
     Region          19..359
                     /region_name="COG4299"
                     /note="Predicted acyltransferase, DUF1624 domain [General
                     function prediction only]"
                     /db_xref="CDD:443440"
ORIGIN      
        1 mtgpalipgn aappgpparl taldawhglt vllmllvndv algswtpaql thapfgsvtl
       61 tdlvspwflf csgvalpfsh aaaqragvrp gerlrrllsr tallylvgag ltsvtehrft
      121 lglgvlqliv lstvigslvv gahawvqaal aaallggygl flglaahagg vgivsetshp
      181 lvavntwlgp lglrglpsvi ptaalvilgs laggvlqqrs agamprllal gtslvlagaa
      241 agplsappls kalwtppyil lsarldtlgl lgmytladsg rvawghclls pltipgrnal
      301 agyvlpivik vwvlqvwsvt wtgeetsmqr allglaqqgl gpwwggwlyt lgyvlaawla
      361 la
//
LOCUS       WP_235910631             429 aa            linear   BCT 02-MAR-2025
DEFINITION  LysM peptidoglycan-binding domain-containing protein
            [Heliobacterium mobile].
ACCESSION   WP_235910631
VERSION     WP_235910631.1
KEYWORDS    RefSeq.
SOURCE      Heliobacterium mobile
  ORGANISM  Heliobacterium mobile
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Heliobacteriaceae; Heliobacterium.
REFERENCE   1  (residues 1 to 429)
  AUTHORS   Bateman,A. and Bycroft,M.
  TITLE     The structure of a LysM domain from E. coli membrane-bound lytic
            murein transglycosylase D (MltD)
  JOURNAL   J Mol Biol 299 (4), 1113-1119 (2000)
   PUBMED   10843862
REFERENCE   2  (residues 1 to 429)
  AUTHORS   Joris,B., Englebert,S., Chu,C.P., Kariyama,R., Daneo-Moore,L.,
            Shockman,G.D. and Ghuysen,J.M.
  TITLE     Modular design of the Enterococcus hirae muramidase-2 and
            Streptococcus faecalis autolysin
  JOURNAL   FEMS Microbiol Lett 70 (3), 257-264 (1992)
   PUBMED   1352512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01476.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Heliobacterium mobile"
                     /db_xref="taxon:28064"
     Protein         1..429
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=46213
     Region          16..>276
                     /region_name="PRK13914"
                     /note="invasion associated endopeptidase"
                     /db_xref="CDD:237555"
     Region          <21..119
                     /region_name="PRK06347"
                     /note="1,4-beta-N-acetylmuramoylhydrolase"
                     /db_xref="CDD:180536"
ORIGIN      
        1 mkpyvktlig altvstalfs ttaayatdvs yvvqsgdtlw iisvkqgvsv driktlnglt
       61 sdviyvgqkl ymveakvytv kagdtlwlis knfgvtvdqi rqlnkltsdm lyvgqqlkit
      121 dgalpkvsgv ttpttttttp tsttttpttt tttptsttst ptstttttpt sttttgtttp
      181 tqttqpaptt epttttppts epsptptttp ssepiptsga vrptavtqwp sityvvqagd
      241 sgwslsqkfg vplsdlyryn ymktdewfda gqkiaingfa prnydvfpgm hvapskygvi
      301 adwffdgqyv lnrndqfqlt dvdtgktvqv kmlggynhsd vepltttdtq tmkelfatwt
      361 wnpravvvwk dgmniaasls gmphsydttp tngvdghfdl ylknscphgt ttdayqaqha
      421 amilkavgk
//
LOCUS       WP_235910655             332 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase family protein [Deinococcus kurensis].
ACCESSION   WP_235910655
VERSION     WP_235910655.1
KEYWORDS    RefSeq.
SOURCE      Deinococcus kurensis
  ORGANISM  Deinococcus kurensis
            Bacteria; Thermotogati; Deinococcota; Deinococci; Deinococcales;
            Deinococcaceae; Deinococcus.
REFERENCE   1  (residues 1 to 332)
  AUTHORS   Kapitonov,V.V. and Jurka,J.
  TITLE     Harbinger transposons and an ancient HARBI1 gene derived from a
            transposase
  JOURNAL   DNA Cell Biol 23 (5), 311-324 (2004)
   PUBMED   15169610
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13359.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Deinococcus kurensis"
                     /db_xref="taxon:2662757"
     Protein         1..332
                     /product="transposase family protein"
                     /calculated_mol_wt=37568
     Region          25..322
                     /region_name="transpos_IS5_4"
                     /note="IS5 family transposase; NF033581"
                     /db_xref="CDD:468098"
     Region          176..321
                     /region_name="DDE_Tnp_4"
                     /note="DDE superfamily endonuclease; pfam13359"
                     /db_xref="CDD:463855"
ORIGIN      
        1 mlqvvrrmqr srsfeslcgl nptefallae hleplwtrah rtsllregrk rrigagrqfk
       61 ldvphrfllt liylrhdlpm hllgvlfemd aanvcrniha llplleqavp aplrartlns
      121 rkvtpddapr rrlrtledvl aafpeiadii vdgaeqprgq pkkkkgsgpg kkavgrpkdq
      181 kkffsvkkgt htlktqvavt pdglvvhlsa paggrthdmk vlkqsrllpr lprgsrvwgd
      241 rgytgvdklc pqhevivprm rpkggmlspe drelnhqiak vritvenvvc klkkfricre
      301 fyrndtrrhg lfwgcvaglv nlrtvnrapq fa
//
LOCUS       WP_235910816             381 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease [Heliobacterium mobile].
ACCESSION   WP_235910816
VERSION     WP_235910816.1
KEYWORDS    RefSeq.
SOURCE      Heliobacterium mobile
  ORGANISM  Heliobacterium mobile
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Heliobacteriaceae; Heliobacterium.
REFERENCE   1  (residues 1 to 381)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024110.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12698.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Heliobacterium mobile"
                     /db_xref="taxon:28064"
     Protein         1..381
                     /product="ABC transporter permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=42652
     Region          <3..363
                     /region_name="ABC2_perm_RbbA"
                     /note="ribosome-associated ATPase/putative transporter
                     RbbA; NF033858"
                     /db_xref="CDD:468210"
ORIGIN      
        1 merkvfawtp fwsilrkefv hlrrdrmsla mavgipllml flfgygintd irhlptivwd
       61 qsfseesqnv iqcfinstyf siqgqaqsyd dirkalatgr srvaivippd yslrlqngqr
      121 aavevlidgs epqstqqamh vaqgvihsrg aslfgrklgk evaldevlpl eaevgvwynp
      181 elkthlftip aliglimqnv tmtltafalv rekergtmeq lictpirpae lilgklipyv
      241 vvgmvtfalv laagtywfav pvrgslsllv slaflfilts lsigmlmstf senqlqamqm
      301 afafilpsil lsgfvfpret mppfirilgn fipltdflvi lrgiflkevg fdylygevlt
      361 ltgftallft lallrfrkrv s
//
LOCUS       WP_235910993             486 aa            linear   BCT 02-MAR-2025
DEFINITION  phage portal protein [Heliobacterium mobile].
ACCESSION   WP_235910993
VERSION     WP_235910993.1
KEYWORDS    RefSeq.
SOURCE      Heliobacterium mobile
  ORGANISM  Heliobacterium mobile
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Heliobacteriaceae; Heliobacterium.
REFERENCE   1  (residues 1 to 486)
  AUTHORS   Chaban,Y., Lurz,R., Brasiles,S., Cornilleau,C., Karreman,M.,
            Zinn-Justin,S., Tavares,P. and Orlova,E.V.
  TITLE     Structural rearrangements in the phage head-to-tail interface
            during assembly and infection
  JOURNAL   Proc Natl Acad Sci U S A 112 (22), 7009-7014 (2015)
   PUBMED   25991862
REFERENCE   2  (residues 1 to 486)
  AUTHORS   Lebedev,A.A., Krause,M.H., Isidro,A.L., Vagin,A.A., Orlova,E.V.,
            Turner,J., Dodson,E.J., Tavares,P. and Antson,A.A.
  TITLE     Structural framework for DNA translocation via the viral portal
            protein
  JOURNAL   EMBO J 26 (7), 1984-1994 (2007)
   PUBMED   17363899
REFERENCE   3  (residues 1 to 486)
  AUTHORS   Lurz,R., Orlova,E.V., Gunther,D., Dube,P., Droge,A., Weise,F., van
            Heel,M. and Tavares,P.
  TITLE     Structural organisation of the head-to-tail interface of a
            bacterial virus
  JOURNAL   J Mol Biol 310 (5), 1027-1037 (2001)
   PUBMED   11501993
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016988.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05133.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Heliobacterium mobile"
                     /db_xref="taxon:28064"
     Protein         1..486
                     /product="phage portal protein"
                     /calculated_mol_wt=54797
     Region          12..476
                     /region_name="Phage_prot_Gp6"
                     /note="Phage portal protein, SPP1 Gp6-like; cl19531"
                     /db_xref="CDD:418597"
ORIGIN      
        1 mslfsigsyy pepahrdrir ryrenkklfl gkhydvfqrv qkklsrrqne llyistnlpg
       61 vickksadfl fgeqptfsag kndnsneqla ierlvegndl hilnyesals nayrgdsfyk
      121 irygqefggm vgkesdpfrv iieaqnpeyv fpetapgdan riiayhiayp vlvkhgdfed
      181 wlltteshyp grivyakfkl dpivvtvdne inewrisael iserrevltg vpyllvvhvp
      241 nyatddcweg iddlsenkpl fdeinhrlsq iasildkhad pamavpagtl gedeqgnpif
      301 rvgvdkvfev mgkdevvpqy itwdgqlqaa fmeldklvkl llinaeipei algsgdagts
      361 gasglaikwr lnsilakvnr krqyynkalk rvllitqlle iackgsqdye vtipkvkfkd
      421 glpddetema nimsirtggk atisqksalm wlddlteeqa dvelkrmqee davadpsifq
      481 qpgdge
//
LOCUS       WP_235911094            1010 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Croceibacterium
            soli].
ACCESSION   WP_235911094
VERSION     WP_235911094.1
KEYWORDS    RefSeq.
SOURCE      Croceibacterium soli
  ORGANISM  Croceibacterium soli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Croceibacterium.
REFERENCE   1  (residues 1 to 1010)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Croceibacterium soli"
                     /db_xref="taxon:1739690"
     Protein         1..1010
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=107454
     Region          38..1010
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 maqdgaadva aeapvpggga iivtgsrias ptatsdaplq ivdaqvidda gatniqevll
       61 enpafgtpal srtnsaflts gtgvatvdlr dlgsdrtlvl ingrrvvssl pgsatvdlnv
      121 iptqfierid vltggassly gsdavagvvn fiyktdfqgi eanaqygisd qdddqryqln
      181 ltagtdfaeg dgnimvhfgy tnesglyanq rkntevddls tmlftgdpad wgtptepffs
      241 sfppqgrfiv gdrfrssgdy tftfgpngql qpcfntngas cvsfrpglaq dnpntpqdet
      301 qpvpnigtgv gpngfnrqaf rtlavpvery lfaaageyri adnvdaffeg tfnktsasrr
      361 iepfplesgg angvfpddgg fnienyvtrd wdgdsdtpdt rqivvnptvp aaivgaatdt
      421 ngdglrdigf arrisefgpr sgsterdfyr fvvglkgdll dgglrwdasy nygqvtenqv
      481 ssgqvnvvnf rdalaaqpdf ddvdgdgnrt eavcvnsnar angctpanif gegsisqaav
      541 dyitaqgtfq tgikqhviqa nvsgnlielp agplgfafgt eyraeesfed ndaltnagln
      601 agnklpdtrg efdvkeafae irvpiladrp ffeqldvgga vrvadystvg vvtswnvtgn
      661 wmpvrdvrlr gtyaravrap nvselfsgls qtfpsgltdp cegigasggg aigdncradp
      721 gvaaniaang vftlnqadiq gisgfnggnp dlneetatsw tvgaviqprf vprltltady
      781 ynieiedvia afprqftldq cysqgnatfc dlitrrptat avnssgsidl inalsvnaat
      841 letdgldvta nwnsplglmg ndrvslrvay thvfandytp vagadvdpsa geigtakdrf
      901 tanaaymldn frmsftgtyi gksyeddqfc aafdlepkcv gvpaqfyldt qasyrvsekv
      961 efyagidnvl dndapnilsg ttfnvtgsdt aadvydifgr rfyggvrlnf
//
LOCUS       WP_235911171             251 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein [Brucella pseudogrignonensis].
ACCESSION   WP_235911171
VERSION     WP_235911171.1
KEYWORDS    RefSeq.
SOURCE      Brucella pseudogrignonensis (Ochrobactrum pseudogrignonense)
  ORGANISM  Brucella pseudogrignonensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021220.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09684.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Brucella pseudogrignonensis"
                     /db_xref="taxon:419475"
     Protein         1..251
                     /product="phage tail protein"
                     /calculated_mol_wt=28823
     Region          <26..123
                     /region_name="Tail_P2_I"
                     /note="Phage tail protein (Tail_P2_I); cl01817"
                     /db_xref="CDD:445563"
ORIGIN      
        1 msesldrrpe lrpaiealha fkfnppdqiv pylvaeygln eiadylpdlr avlregvswq
       61 rligtpaavh kalrwinhdg dieefpakkr kwwwfqvhlp fevrntdfvr pmthlvkask
      121 plrsefarvt agwdvrafql nkhrlngdaf lnnwsgvrrs pgepvlslrv nqnvrtkfwp
      181 apfvrvrtht vitsfvraty qlplrqriai fvasagvlar ysdpaiqtfq napfvhdrfg
      241 kpasrahigf s
//
LOCUS       WP_235911243             745 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Brucella
            pseudogrignonensis].
ACCESSION   WP_235911243
VERSION     WP_235911243.1
KEYWORDS    RefSeq.
SOURCE      Brucella pseudogrignonensis (Ochrobactrum pseudogrignonense)
  ORGANISM  Brucella pseudogrignonensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 745)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Brucella pseudogrignonensis"
                     /db_xref="taxon:419475"
     Protein         1..745
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=81436
     Region          70..745
                     /region_name="PRK13483"
                     /note="ligand-gated channel protein"
                     /db_xref="CDD:184080"
ORIGIN      
        1 mtslfrglrt ngsqnrqlas gslfakaila gtclstalil sgaasfaqta ttaeeeaakk
       61 kqaeaqateq vnaaggitln qivvsatgfe qnitdapasi svvpgeelek gsyrdlgdal
      121 rdvqgvavtg aaaerdifir glpgsytlil vdgkrqstrd artngnsgfe qsflppanai
      181 erievirgpm sslygsdamg gvinvitkkv sdkwsgslsf dttvqqhskf gnslqgsyym
      241 tgplvpnlvg vqlwgrglkr qedkiisgtp eqrdiditgr vtitpnadhd ivfeagktrl
      301 rrdssvgnti npvatgstap ldtynmndrn hwsishtgrw gpttsefsfm qetaqrtnyt
      361 wnkargdfve slrsphirns tldgkfttpf elygnhtlvt ggqfiegtlt dqnpgrrtgl
      421 deeftikqwa lfaedewwit pdfaltgglr mdhheiygsh wsprgyavwh atdqltlkgg
      481 istgfrapei rtiapgyayt tgggnctygp tgncgviigd pnlqpeksts yeasalwdnq
      541 qglrlgatyf ytdfkdkias niqydpitgq plrwaqdtny vlyysynide atiqgvelta
      601 dweatdtikl rgsytytdse qktgeyaglp lartpkhman iradwetpvd gltawaagny
      661 hgpeinaglr igtvgepyay nsrgqviark ykgyatfdlg gsyefsenvt lnaavynifd
      721 kkvtvdeinn vvegrrlwlg mtsrf
//
LOCUS       WP_235911411             215 aa            linear   BCT 02-MAR-2025
DEFINITION  MotA/TolQ/ExbB proton channel family protein [Croceibacterium
            soli].
ACCESSION   WP_235911411
VERSION     WP_235911411.1
KEYWORDS    RefSeq.
SOURCE      Croceibacterium soli
  ORGANISM  Croceibacterium soli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Croceibacterium.
REFERENCE   1  (residues 1 to 215)
  AUTHORS   Braun,T.F., Poulson,S., Gully,J.B., Empey,J.C., Van Way,S.,
            Putnam,A. and Blair,D.F.
  TITLE     Function of proline residues of MotA in torque generation by the
            flagellar motor of Escherichia coli
  JOURNAL   J Bacteriol 181 (11), 3542-3551 (1999)
   PUBMED   10348868
REFERENCE   2  (residues 1 to 215)
  AUTHORS   Higgs,P.I., Myers,P.S. and Postle,K.
  TITLE     Interactions in the TonB-dependent energy transduction complex:
            ExbB and ExbD form homomultimers
  JOURNAL   J Bacteriol 180 (22), 6031-6038 (1998)
   PUBMED   9811664
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013760.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01618.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Croceibacterium soli"
                     /db_xref="taxon:1739690"
     Protein         1..215
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /calculated_mol_wt=23009
     Region          5..192
                     /region_name="PRK10414"
                     /note="biopolymer transporter ExbB; cl00568"
                     /db_xref="CDD:469824"
ORIGIN      
        1 mtnlfdplsl givlggtlaa vllrcgwrds ssalaavvhl farpfdsdrv raelavqiqe
       61 idrdgllraq phhfgdgefd elsdtlirrr svqslydehe ryrwrravta gtagrvlaea
      121 adlapvlgla gtllslsgls tiaegdygra igmavmttly glvaanflfa plsaaverra
      181 qseekarqal ldwlagaier scnppeapaa kraaa
//
LOCUS       WP_235911414             455 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar filament capping protein FliD [Croceibacterium soli].
ACCESSION   WP_235911414
VERSION     WP_235911414.1
KEYWORDS    RefSeq.
SOURCE      Croceibacterium soli
  ORGANISM  Croceibacterium soli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Croceibacterium.
REFERENCE   1  (residues 1 to 455)
  AUTHORS   Tasteyre,A., Karjalainen,T., Avesani,V., Delmee,M., Collignon,A.,
            Bourlioux,P. and Barc,M.C.
  TITLE     Molecular characterization of fliD gene encoding flagellar cap and
            its expression among Clostridium difficile isolates from different
            serogroups
  JOURNAL   J Clin Microbiol 39 (3), 1178-1183 (2001)
   PUBMED   11230454
REFERENCE   2  (residues 1 to 455)
  AUTHORS   Arora,S.K., Ritchings,B.W., Almira,E.C., Lory,S. and Ramphal,R.
  TITLE     The Pseudomonas aeruginosa flagellar cap protein, FliD, is
            responsible for mucin adhesion
  JOURNAL   Infect Immun 66 (3), 1000-1007 (1998)
   PUBMED   9488388
REFERENCE   3  (residues 1 to 455)
  AUTHORS   Chen,L. and Helmann,J.D.
  TITLE     The Bacillus subtilis sigma D-dependent operon encoding the
            flagellar proteins FliD, FliS, and FliT
  JOURNAL   J Bacteriol 176 (11), 3093-3101 (1994)
   PUBMED   8195064
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07195.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Croceibacterium soli"
                     /db_xref="taxon:1739690"
     gene            1..455
                     /gene="fliD"
     Protein         1..455
                     /product="flagellar filament capping protein FliD"
                     /GO_component="GO:0009288 - bacterial-type flagellum
                     [Evidence IEA]"
                     /GO_process="GO:0007155 - cell adhesion [Evidence IEA]"
                     /calculated_mol_wt=45903
     Region          3..450
                     /region_name="FliD"
                     /note="Flagellar capping protein FliD [Cell motility];
                     COG1345"
                     /db_xref="CDD:440956"
ORIGIN      
        1 mvalannlad aqfqlradrl aaqgdvlerq istasslkss lsllagalgd rvrtgdlavt
       61 ptvanasvat asspagatgs gtyslevlsl aktqtlaspa faastdvvga gsltfrfgqt
      121 sgsaftedts haavtvdias gstladiana inakkagvta yvaqtsqgaq lvlkgpegaq
      181 ngfiveaaet ageeglaala wnpsaggdpa rllaasadaq fkldglamss asnttgaiap
      241 glslkltgtn agapttigfs spvanittam qdlagalnei agelrtatdp mggdlardpg
      301 aralkrtfse lagqvimpna aegtprtlad lglaterdgs frldtvrlka aleadpagaa
      361 amftaglygv yatfdkvsra asvtgdpgsl ggsiaryqkq siqldkaeak lteqqerlra
      421 tlvsrfaaad trisaskstl sflqsqidaw nsqrd
//
LOCUS       WP_235911429             334 aa            linear   BCT 02-MAR-2025
DEFINITION  alcohol dehydrogenase catalytic domain-containing protein
            [Croceibacterium soli].
ACCESSION   WP_235911429
VERSION     WP_235911429.1
KEYWORDS    RefSeq.
SOURCE      Croceibacterium soli
  ORGANISM  Croceibacterium soli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Croceibacterium.
REFERENCE   1  (residues 1 to 334)
  AUTHORS   Taneja,B. and Mande,S.C.
  TITLE     Conserved structural features and sequence patterns in the GroES
            fold family
  JOURNAL   Protein Eng 12 (10), 815-818 (1999)
   PUBMED   10556240
REFERENCE   2  (residues 1 to 334)
  AUTHORS   Murzin,A.G.
  TITLE     Structural classification of proteins: new superfamilies
  JOURNAL   Curr Opin Struct Biol 6 (3), 386-394 (1996)
   PUBMED   8804825
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08240.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Croceibacterium soli"
                     /db_xref="taxon:1739690"
     Protein         1..334
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /calculated_mol_wt=35055
     Region          2..332
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
     Site            order(39..41,44,142,146,166..171,190..191,195,209,
                     232..233,255..256,279..281)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176178"
ORIGIN      
        1 mmravtfqgl hqplafealp dptpgtsevv vkvgrcgicg sdlhmtedpa ygckhgdilg
       61 hefagevvgl gskveglktg dlvsviplvs cgacescrkg evqwctqfgl qgggyaeyav
      121 trpnqcvrlp tdvsiadgai ieplavalhg vnlsgmkagd kvlilgagpi glavafwarr
      181 mgaakvavqd iadfqeqral dmgadvfvvd padpvgsaer glggkadivf ecvglpglia
      241 qavdqvkprg tilllglctk pdtfnsfaml skevrlvtsa fftrqeyeaa ldaldagame
      301 prllvtdtit ladtpeifes lkrrtsqckv liap
//
LOCUS       WP_235911430            1044 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein [Croceibacterium soli].
ACCESSION   WP_235911430
VERSION     WP_235911430.1
KEYWORDS    RefSeq.
SOURCE      Croceibacterium soli
  ORGANISM  Croceibacterium soli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Croceibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Croceibacterium soli"
                     /db_xref="taxon:1739690"
     Protein         1..1044
                     /product="helicase-related protein"
                     /calculated_mol_wt=116867
     Region          64..1011
                     /region_name="DISARM_DrmD"
                     /note="DISARM system SNF2-like helicase DrmD, long form;
                     NF038317"
                     /db_xref="CDD:468471"
ORIGIN      
        1 mvagtgdfmf stgdrvrlih dpsvvgvvsg asgferagrr fiqvelpsgl asfptnqler
       61 vasppdalvd lragkfsapv dlrralthlr mtgrladmiy smgatntefh ayqfkpvlkl
      121 lnspsrglli adevglgkti eagliwtelv arfdsrrllv vcpkslvlkw rdelrnkfnv
      181 narvcsagel ldtlkddqlr regfaiiasl salrpprkwn dpdwsatgpr adlatflada
      241 eddlfdlaif deahhlrnte nthhrlgqlv tsvadytlfl satpinlran dlrallklid
      301 pdtferewlf dvlqeenapl iraweaardp rvplskvaei iedlpegqvl ktgkrlerlr
      361 aelakrlddt ptnrvklaar ieemsllgsi inrtrrrdva efkverrpqa plwtmneaer
      421 afydaatqqi eayayqndin arfllaqtqr llasslatay rhwggrsgfl dlddededvd
      481 rslvpgplia algeicdeps vlreleahdt kfdrlvswle efrsrdpdqr iiifssfrkt
      541 idylasrlak vgyttmelhg gikidrqetv trfaessggt vlltsevgge gldlqfcrvl
      601 inwdlpwnpm kveqrigrid rigqqspsid iinliaadti eqqiyerlya rlgiiqqtlg
      661 dfepilgeiv rdielilmdp eltaeqraak fsqsilaaeq rkiqaeeler eapglvahgd
      721 silqrineaq apfrrltped lrdyianvlv nvfdgtriqa vgdkdidsyd irlsaraqae
      781 faqyraahsr ryptrfssds aagvravfgs npnpvryrai eaipmthpla rfcadimeer
      841 qfgiaprpvt alqaahrdew glpegtyava vqrwsidgis pidrlsfvgg rmhdgalipe
      901 eaaeqmlmea ltespslwsp aatdllraia lvdellvptl ngarndfeda eaarhfdlve
      961 tqralilehk erearraeal irelrlsgsa krmqvsfavk gkldkflarm dlkladvtkr
     1021 garlnfpeps lvgialirig gggg
//
LOCUS       WP_235911474             182 aa            linear   BCT 02-MAR-2025
DEFINITION  MarR family transcriptional regulator [Croceibacterium soli].
ACCESSION   WP_235911474
VERSION     WP_235911474.1
KEYWORDS    RefSeq.
SOURCE      Croceibacterium soli
  ORGANISM  Croceibacterium soli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Croceibacterium.
REFERENCE   1  (residues 1 to 182)
  AUTHORS   Alekshun,M.N., Levy,S.B., Mealy,T.R., Seaton,B.A. and Head,J.F.
  TITLE     The crystal structure of MarR, a regulator of multiple antibiotic
            resistance, at 2.3 A resolution
  JOURNAL   Nat Struct Biol 8 (8), 710-714 (2001)
   PUBMED   11473263
REFERENCE   2  (residues 1 to 182)
  AUTHORS   Sulavik,M.C., Dazer,M. and Miller,P.F.
  TITLE     The Salmonella typhimurium mar locus: molecular and genetic
            analyses and assessment of its role in virulence
  JOURNAL   J Bacteriol 179 (6), 1857-1866 (1997)
   PUBMED   9068629
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013231.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01047.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Croceibacterium soli"
                     /db_xref="taxon:1739690"
     Protein         1..182
                     /product="MarR family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=20123
     Region          29..158
                     /region_name="MarR"
                     /note="DNA-binding transcriptional regulator, MarR family
                     [Transcription]; COG1846"
                     /db_xref="CDD:441451"
     Region          137..>182
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
ORIGIN      
        1 maskeenrda vaerkpgise pagrvgtlhr llkltnrlma pfsthlshry nislnefrll
       61 maigrtgasa shelaehtgv namsvsrava tlerngrikv etdpsnrrrk vlrlteegar
      121 lyevmrpqtq lvadylvdgl peadiaklde llgkliarle aqdeqgrslf iestkpaedq
      181 da
//
LOCUS       WP_235911491             430 aa            linear   BCT 02-MAR-2025
DEFINITION  aconitase X [Croceibacterium soli].
ACCESSION   WP_235911491
VERSION     WP_235911491.1
KEYWORDS    RefSeq.
SOURCE      Croceibacterium soli
  ORGANISM  Croceibacterium soli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Croceibacterium.
REFERENCE   1  (residues 1 to 430)
  AUTHORS   Watanabe,S., Tajima,K., Fujii,S., Fukumori,F., Hara,R., Fukuda,R.,
            Miyazaki,M., Kino,K. and Watanabe,Y.
  TITLE     Functional characterization of aconitase X as a
            cis-3-hydroxy-L-proline dehydratase
  JOURNAL   Sci Rep 6, 38720 (2016)
   PUBMED   27929065
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 430)
  AUTHORS   Makarova,K.S. and Koonin,E.V.
  TITLE     Filling a gap in the central metabolism of archaea: prediction of a
            novel aconitase by comparative-genomic analysis
  JOURNAL   FEMS Microbiol Lett 227 (1), 17-23 (2003)
   PUBMED   14568143
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04412.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Croceibacterium soli"
                     /db_xref="taxon:1739690"
     Protein         1..430
                     /product="aconitase X"
                     /calculated_mol_wt=46527
     Region          3..429
                     /region_name="AcnX1"
                     /note="Mevalonate 5-phosphate dehydratase subunit 1,
                     aconitase superfamily (modified mevalonate pathway) [Lipid
                     transport and metabolism]; COG1679"
                     /db_xref="CDD:441285"
ORIGIN      
        1 mvmrlsdeek amrdgaqgqa vakamdllir ygealgaedf vytdniagvp gsspkwvkey
       61 yaadggdyra vfsrfdldsd evvdvpriqg fschlqggmd pelwreqgmt eeafanfqad
      121 eqevaghgiq vlktctpyla gnvpvmgehc awmessavvf cnsviggrtn cegrestsaa
      181 mlakrvpnwg fhrdefrkgq hliqvetpvd svfewgmlgy ftgaavedai pvldgaisdp
      241 alikhkhfga aaassggvem yhmagitpea psveaafgga pkgerftygp nerraiyerl
      301 naigesrdvd yvmlgcphys aeqlaeaarl legrrvhens slwiftsrav kataeasgya
      361 dvirkagahl mtdtcsaisq avppgtrvaa fdsakqthyl paimgiegwf gttqdcidaa
      421 ctgrwegrln
//
LOCUS       WP_235911503             767 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxypeptidase-like regulatory domain-containing protein
            [Sodaliphilus pleomorphus].
ACCESSION   WP_235911503
VERSION     WP_235911503.1
KEYWORDS    RefSeq.
SOURCE      Sodaliphilus pleomorphus
  ORGANISM  Sodaliphilus pleomorphus
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Muribaculaceae; Sodaliphilus.
REFERENCE   1  (residues 1 to 767)
  AUTHORS   Cho,K.H. and Salyers,A.A.
  TITLE     Biochemical analysis of interactions between outer membrane
            proteins that contribute to starch utilization by Bacteroides
            thetaiotaomicron
  JOURNAL   J Bacteriol 183 (24), 7224-7230 (2001)
   PUBMED   11717282
REFERENCE   2  (residues 1 to 767)
  AUTHORS   Shipman,J.A., Berleman,J.E. and Salyers,A.A.
  TITLE     Characterization of four outer membrane proteins involved in
            binding starch to the cell surface of Bacteroides thetaiotaomicron
  JOURNAL   J Bacteriol 182 (19), 5365-5372 (2000)
   PUBMED   10986238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025092.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13715.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Sodaliphilus pleomorphus"
                     /db_xref="taxon:2606626"
     Protein         1..767
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /calculated_mol_wt=86765
     Region          25..115
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
     Region          100..596
                     /region_name="FepA"
                     /note="Outer membrane receptor for ferrienterochelin and
                     colicins [Inorganic ion transport and metabolism];
                     COG4771"
                     /db_xref="CDD:443803"
ORIGIN      
        1 mklimkhfvf alamlqalcl caqttgvvvd enkqplpaat vslyrmgeek tmtgvmtdsl
       61 gqfelgtqkg qdyvitisfm gytpqhiecr nvpgkfelgt iamepesqtl sgvtvtassv
      121 irkadrqivi psqlqrktss ngvallqhlq lsrisvntln gsvttttgda velringvka
      181 eiqdvkalqp advlkveyhd npglrygnvs avidiilkek taggnvsgel mntinplgig
      241 dyqlssnyha gkssvkasvn wnrrdlnwyr entesfnats paienqeigq ktkakydnvn
      301 lsvgydytng gnqlsvtfrd lynktpnsvs drnslleqeg ttytvtdrtr tnsnspsldv
      361 yyqrefakdk hlyldltgty insashrlyr qadgtdtqki tsdvdgdkys aiaeaiyeqn
      421 vkdsrfsfgl rhqqshtrni ytgtdsstvk mnnnetyafg ewysklgrfd ytlglgvmrt
      481 hlsqggakqd kyilrptiql gyrfgnhvrv rykgyiggya pslsdlsdve qqidiyqlrr
      541 gnpnlhtvtf ysnefslsvd tkwfsaewft rysyddkpfm eqttyedgmy irsyanqkgf
      601 hrlnsqvsiq aqpwaehlmi qvtpyvnryi skgndythth tnwgvrgnlm amynnwymga
      661 nvetsfhnlw getinkdeas hslvagynre rwgvelqfqn ifsshyemsv enrsrlapyr
      721 qlmwsknlcr vfgidvhfnl dfgkhrsqae qriknsdtda gimsgak
//
LOCUS       WP_235911532              91 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2442 domain-containing protein [Mesorhizobium xinjiangense].
ACCESSION   WP_235911532
VERSION     WP_235911532.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium xinjiangense
  ORGANISM  Mesorhizobium xinjiangense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10387.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Mesorhizobium xinjiangense"
                     /db_xref="taxon:2678685"
     Protein         1..91
                     /product="DUF2442 domain-containing protein"
                     /calculated_mol_wt=10188
     Region          22..81
                     /region_name="DUF2442"
                     /note="Protein of unknown function (DUF2442); pfam10387"
                     /db_xref="CDD:431248"
ORIGIN      
        1 mtslafetdd mrpvkawcth dkvhvgladg rriatplwwy pfldgldelq lndielmyeg
       61 iwwpavdegi siksmflgkk apgarqpqta a
//
LOCUS       WP_235911555             188 aa            linear   BCT 02-MAR-2025
DEFINITION  LPD11 domain-containing protein [Sodaliphilus pleomorphus].
ACCESSION   WP_235911555
VERSION     WP_235911555.1
KEYWORDS    RefSeq.
SOURCE      Sodaliphilus pleomorphus
  ORGANISM  Sodaliphilus pleomorphus
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Muribaculaceae; Sodaliphilus.
REFERENCE   1  (residues 1 to 188)
  AUTHORS   Iyer,L.M., Burroughs,A.M., Anand,S., de Souza,R.F. and Aravind,L.
  TITLE     Polyvalent Proteins, a Pervasive Theme in the Intergenomic
            Biological Conflicts of Bacteriophages and Conjugative Elements
  JOURNAL   J Bacteriol 199 (15), e00245-17 (2017)
   PUBMED   28559295
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037922.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18824.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Sodaliphilus pleomorphus"
                     /db_xref="taxon:2606626"
     Protein         1..188
                     /product="LPD11 domain-containing protein"
                     /calculated_mol_wt=22472
     Region          118..180
                     /region_name="LPD11"
                     /note="Large polyvalent protein-associated domain 11;
                     pfam18824"
                     /db_xref="CDD:436766"
ORIGIN      
        1 mefkctdega ifmmnaktan rynelydkai delnrsndlr afdrmheqvr kecdpqevyf
       61 yefnnhesmy aydgdyeaik liidifgedi arkikrynag ysidyimipe wvkhtwlmlq
      121 rlirdcdyyl gcgnrcakhl wardeeaqit emrkllaelp deykpewlts kkidvyeskm
      181 lnlqpvvl
//
LOCUS       WP_235911583             179 aa            linear   BCT 02-MAR-2025
DEFINITION  RhuM family protein [Sodaliphilus pleomorphus].
ACCESSION   WP_235911583
VERSION     WP_235911583.1
KEYWORDS    RefSeq.
SOURCE      Sodaliphilus pleomorphus
  ORGANISM  Sodaliphilus pleomorphus
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Muribaculaceae; Sodaliphilus.
REFERENCE   1  (residues 1 to 179)
  AUTHORS   Amavisit,P., Lightfoot,D., Browning,G.F. and Markham,P.F.
  TITLE     Variation between pathogenic serovars within Salmonella
            pathogenicity islands
  JOURNAL   J Bacteriol 185 (12), 3624-3635 (2003)
   PUBMED   12775700
REFERENCE   2  (residues 1 to 179)
  AUTHORS   Blanc-Potard,A.B., Solomon,F., Kayser,J. and Groisman,E.A.
  TITLE     The SPI-3 pathogenicity island of Salmonella enterica
  JOURNAL   J Bacteriol 181 (3), 998-1004 (1999)
   PUBMED   9922266
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13310.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Sodaliphilus pleomorphus"
                     /db_xref="taxon:2606626"
     gene            1..179
                     /gene="rhuM"
     Protein         1..179
                     /product="RhuM family protein"
                     /calculated_mol_wt=20438
     Region          29..>153
                     /region_name="Virulence_RhuM"
                     /note="Virulence protein RhuM family; cl19850"
                     /db_xref="CDD:473228"
ORIGIN      
        1 maelfatskq tisyhvinil keneltessv vkeylttaad gksynivfys lemiiavgyr
       61 vrgvrgtqfr qwatrhlsey lvkgfvidde rlknpdgrpd yfdellarir dirasekrfy
      121 qkirdlfsls sdydksdkat qmffaetqnk llyaatstaa ttflprcspa rrgadscvk
//
LOCUS       WP_235911844              34 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Sodaliphilus pleomorphus].
ACCESSION   WP_235911844
VERSION     WP_235911844.1
KEYWORDS    RefSeq.
SOURCE      Sodaliphilus pleomorphus
  ORGANISM  Sodaliphilus pleomorphus
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Muribaculaceae; Sodaliphilus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024571.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13173.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..34
                     /organism="Sodaliphilus pleomorphus"
                     /db_xref="taxon:2606626"
     Protein         1..34
                     /product="AAA family ATPase"
                     /calculated_mol_wt=3805
     Region          2..>24
                     /region_name="AAA_14"
                     /note="AAA domain; pfam13173"
                     /db_xref="CDD:463799"
ORIGIN      
        1 miegprrvgk stivkqfaqr eyksyiivrn iptg
//
LOCUS       WP_235911884             247 aa            linear   BCT 02-MAR-2025
DEFINITION  nitroreductase family protein [Mesorhizobium xinjiangense].
ACCESSION   WP_235911884
VERSION     WP_235911884.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium xinjiangense
  ORGANISM  Mesorhizobium xinjiangense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 247)
  AUTHORS   de Oliveira,I.M., Henriques,J.A. and Bonatto,D.
  TITLE     In silico identification of a new group of specific bacterial and
            fungal nitroreductases-like proteins
  JOURNAL   Biochem Biophys Res Commun 355 (4), 919-925 (2007)
   PUBMED   17331467
REFERENCE   2  (residues 1 to 247)
  AUTHORS   Hecht,H.J., Erdmann,H., Park,H.J., Sprinzl,M. and Schmid,R.D.
  TITLE     Crystal structure of NADH oxidase from Thermus thermophilus
  JOURNAL   Nat Struct Biol 2 (12), 1109-1114 (1995)
   PUBMED   8846223
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013077.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00881.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Mesorhizobium xinjiangense"
                     /db_xref="taxon:2678685"
     Protein         1..247
                     /product="nitroreductase family protein"
                     /calculated_mol_wt=26513
     Region          49..243
                     /region_name="Nitro_FMN_reductase"
                     /note="nitroreductase family protein; cl00514"
                     /db_xref="CDD:444950"
     Site            order(52,54,73,75..76,78,81..82,84,86,88,90..95,176,
                     178..179,182..183,186..187,199..200,210)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:380311"
     Site            order(54,56,58,85,199..200)
                     /site_type="other"
                     /note="FMN binding site [chemical binding]"
                     /db_xref="CDD:380311"
ORIGIN      
        1 mnyivtaaae patgaiaeiy aqaekrgstl gpltspstar ptptnaviet ilsrsaakyy
       61 datatlsddq irelvrigta aptsfhlqnw rfiavrtpea karlhpiawk qpaildaavt
      121 fiiigqlada stvperlapv veagimpahl vpewetparg lyddqpqrqr deavrsatfg
      181 taaiiyaars lglgstpmig fdaeavhsef glredevpvm lltvgperag nwsqkprmpv
      241 tdvldfa
//
LOCUS       WP_235911378             431 aa            linear   BCT 02-MAR-2025
DEFINITION  Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal
            domain [Croceibacterium soli].
ACCESSION   WP_235911378
VERSION     WP_235911378.1
KEYWORDS    RefSeq.
SOURCE      Croceibacterium soli
  ORGANISM  Croceibacterium soli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Croceibacterium.
REFERENCE   1  (residues 1 to 431)
  AUTHORS   Baumer,S., Ide,T., Jacobi,C., Johann,A., Gottschalk,G. and
            Deppenmeier,U.
  TITLE     The F420H2 dehydrogenase from Methanosarcina mazei is a
            Redox-driven proton pump closely related to NADH dehydrogenases
  JOURNAL   J Biol Chem 275 (24), 17968-17973 (2000)
   PUBMED   10751389
REFERENCE   2  (residues 1 to 431)
  AUTHORS   Alex,L.A., Reeve,J.N., Orme-Johnson,W.H. and Walsh,C.T.
  TITLE     Cloning, sequence determination, and expression of the genes
            encoding the subunits of the nickel-containing
            8-hydroxy-5-deazaflavin reducing hydrogenase from Methanobacterium
            thermoautotrophicum delta H
  JOURNAL   Biochemistry 29 (31), 7237-7244 (1990)
   PUBMED   2207102
REFERENCE   3  (residues 1 to 431)
  AUTHORS   Shuber,A.P., Orr,E.C., Recny,M.A., Schendel,P.F., May,H.D.,
            Schauer,N.L. and Ferry,J.G.
  TITLE     Cloning, expression, and nucleotide sequence of the formate
            dehydrogenase genes from Methanobacterium formicicum
  JOURNAL   J Biol Chem 261 (28), 12942-12947 (1986)
   PUBMED   3531194
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016328.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04432.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Croceibacterium soli"
                     /db_xref="taxon:1739690"
     Protein         1..431
                     /product="Coenzyme F420 hydrogenase/dehydrogenase, beta
                     subunit C-terminal domain"
                     /calculated_mol_wt=47997
     Region          61..352
                     /region_name="FrhB"
                     /note="Coenzyme F420-reducing hydrogenase, beta subunit
                     [Energy production and conversion]; COG1035"
                     /db_xref="CDD:440658"
ORIGIN      
        1 mrwdkfgqlk phgpqewyrs rsaqfasicp fsphardeda iaaerfpvvr hvdhrvgrfe
       61 aawvghaeqe gfraegssgg lvswvavell arglvdgvah vgaadpareg rhfayrisrs
      121 laevrqnaks ryypielsgv ldtireqpgr yavigvpcfi kavhlaraad pvlaerivft
      181 lglycghmks aamidsfalq mgveppavea vdfrlknpdr panwyrtqlr lagggaaeqd
      241 wwhlvegdwg sgffqnsacn fcddvvaeta disfgdawve pyssdgrgtn vvvvrsqelr
      301 amveegiaeq rltlrevdae fvvetqaagf rqrreglayr larrrgglmp rkrvapaasd
      361 lplrrraiyt mraaisafsh rafrfanlvh vprlyfsagr qllklyqalt ysrgrlgalf
      421 drlekgrgqg a
//
LOCUS       WP_235911909             229 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Mesorhizobium xinjiangense].
ACCESSION   WP_235911909
VERSION     WP_235911909.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium xinjiangense
  ORGANISM  Mesorhizobium xinjiangense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Mullin,D.A., Zies,D.L., Mullin,A.H., Caballera,N. and Ely,B.
  TITLE     Genetic organization and transposition properties of IS511
  JOURNAL   Mol Gen Genet 254 (4), 456-463 (1997)
   PUBMED   9180700
REFERENCE   2  (residues 1 to 229)
  AUTHORS   Fischer,J., Maier,H., Viell,P. and Altenbuchner,J.
  TITLE     The use of an improved transposon mutagenesis system for DNA
            sequencing leads to the characterization of a new insertion
            sequence of Streptomyces lividans 66
  JOURNAL   Gene 180 (1-2), 81-89 (1996)
   PUBMED   8973350
REFERENCE   3  (residues 1 to 229)
  AUTHORS   Zekri,S. and Toro,N.
  TITLE     Identification and nucleotide sequence of Rhizobium meliloti
            insertion sequence ISRm6, a small transposable element that belongs
            to the IS3 family
  JOURNAL   Gene 175 (1-2), 43-48 (1996)
   PUBMED   8917074
  REMARK    Erratum:[Gene 1997 Mar 25;188(1):149]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01527.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Mesorhizobium xinjiangense"
                     /db_xref="taxon:2678685"
     Protein         1..229
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=25161
     Region          <6..172
                     /region_name="valS"
                     /note="valyl-tRNA synthetase; Provisional; PRK14900"
                     /db_xref="CDD:237855"
     Region          148..>228
                     /region_name="transpos_IS3"
                     /note="IS3 family transposase; NF033516"
                     /db_xref="CDD:468052"
ORIGIN      
        1 mkrqirpfvv evkhkrgnsk wnrsiwgdld lsamaaeatr eadamelqsp qlidsdlapi
       61 daedsnkqrv ehsmpdpqea eaaqattdap akadstetkm laprpkraar akpkrstake
      121 aakavasasv pparataprk iysekeraqk lgqieksigr gdsvkkatkq agiseqtyyq
      181 wkkaaaslpk gddlkdllal eeenarlkkq laerlrkena elkkklgld
//
LOCUS       WP_235911945            1433 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome P450 [Mesorhizobium xinjiangense].
ACCESSION   WP_235911945
VERSION     WP_235911945.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium xinjiangense
  ORGANISM  Mesorhizobium xinjiangense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 1433)
  AUTHORS   Werck-Reichhart,D. and Feyereisen,R.
  TITLE     Cytochromes P450: a success story
  JOURNAL   Genome Biol 1 (6), REVIEWS3003 (2000)
   PUBMED   11178272
REFERENCE   2  (residues 1 to 1433)
  AUTHORS   Graham-Lorence,S., Amarneh,B., White,R.E., Peterson,J.A. and
            Simpson,E.R.
  TITLE     A three-dimensional model of aromatase cytochrome P450
  JOURNAL   Protein Sci 4 (6), 1065-1080 (1995)
   PUBMED   7549871
REFERENCE   3  (residues 1 to 1433)
  AUTHORS   Degtyarenko,K.N. and Archakov,A.I.
  TITLE     Molecular evolution of P450 superfamily and P450-containing
            monooxygenase systems
  JOURNAL   FEBS Lett 332 (1-2), 1-8 (1993)
   PUBMED   8405421
REFERENCE   4  (residues 1 to 1433)
  AUTHORS   Nelson,D.R., Kamataki,T., Waxman,D.J., Guengerich,F.P.,
            Estabrook,R.W., Feyereisen,R., Gonzalez,F.J., Coon,M.J.,
            Gunsalus,I.C., Gotoh,O. et al.
  TITLE     The P450 superfamily: update on new sequences, gene mapping,
            accession numbers, early trivial names of enzymes, and nomenclature
  JOURNAL   DNA Cell Biol 12 (1), 1-51 (1993)
   PUBMED   7678494
REFERENCE   5  (residues 1 to 1433)
  AUTHORS   Guengerich,F.P.
  TITLE     Reactions and significance of cytochrome P-450 enzymes
  JOURNAL   J Biol Chem 266 (16), 10019-10022 (1991)
   PUBMED   2037557
REFERENCE   6  (residues 1 to 1433)
  AUTHORS   Nebert,D.W. and Gonzalez,F.J.
  TITLE     P450 genes: structure, evolution, and regulation
  JOURNAL   Annu Rev Biochem 56, 945-993 (1987)
   PUBMED   3304150
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00067.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1433
                     /organism="Mesorhizobium xinjiangense"
                     /db_xref="taxon:2678685"
     Protein         1..1433
                     /product="cytochrome P450"
                     /GO_function="GO:0004497 - monooxygenase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=156813
     Region          97..464
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(155,159,166,209,302..303,306..307,310..311,314,352,
                     361,363,391,418..420,424..428,431..432)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410705"
     Site            order(229..230,302,305..306,310,359..362)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410705"
     Region          <683..754
                     /region_name="VKOR"
                     /note="Vitamin K epoxide reductase (VKOR) family; cl01729"
                     /db_xref="CDD:445522"
     Region          1009..1413
                     /region_name="EfeB"
                     /note="Periplasmic deferrochelatase/peroxidase EfeB
                     [Inorganic ion transport and metabolism]; COG2837"
                     /db_xref="CDD:442085"
ORIGIN      
        1 mnkltytdrr rpyclkstda slaffdpggc gnvtcdgrgs pqvirtkyfq rvrqaqqhdq
       61 pleslppfdl qrlrggrfgt ivksllpdnp rrvlsvlrrw lpvlklgglt llsrnddvre
      121 vlerqdafet pfglemaema ggsnfilgmq dgpgyramks avltafppae vvarvrpiaa
      181 rqsreimrga mpganaveql lkivpvqicr dyygltidde nefadwaial salffgdpfg
      241 srtkrelalv aahrmreaid rsietvaaea kpadtplarl vamhksdpdr vttahvrsim
      301 mgmvtgfipt nllaagkald aalsipeaka aveealaagd dealdaaile smrfnpalpa
      361 qfryvprdtv iaagtrrerr lpagstvacl mqsamfdpda vdepdafrpg rpakdylvfg
      421 hgihwcigsa iakvqigecf ralfakpglr rtagragrlr flgpfpeslc vdfdlpaesr
      481 vvdhafvtva apvregvdia alrgavaqlg nppqadiraa fdatgivhfa slsvigradp
      541 aeeqpddryh lvfeftadgp kaeaiaavar harpilwpif rdgcgldnee elqpfllrha
      601 idvapgfhkp aglcfagvpg hsvariraea alggsvmrql eeavpggplt vaeklervtq
      661 rlaadgsrew vfqpapdrls gpqhsawaal wglfrdrafv aglviavlaf slpyyaglfa
      721 glatgvvsaf llflaaiplg attlallafa vfwlgrraln akeksdpvhn glipperfap
      781 iaerenfwah nhlaaisemk ggwlrgvtlr taffaiaqfa rnvfspghla digsihfarw
      841 vllpgtgkll ffsnyggswe syledfvvka hagltavwsn avgfprardl fwegasdgpr
      901 fkrwaraqqv ptlfwysayp dlttghiran arlrraialn daaewraclg aepdaatpie
      961 taevqsiffr gmgdleaaem lavaipdcvp manrrkwlgy vvsklafgda ppderamiaa
     1021 fsaqglarlg ldndaalatl plsfrrgmsr sdqsrvlgdv grndpgnwew ghgeagadvv
     1081 lvcyakdgnr lkadvaslmr rtrsaglaic hrlpltierd arnkaiehfg yrdnisqpmi
     1141 agtprarrpa dpqhrvaage fllgyadetg rlppsiavre aaaerqlrdm pdnpgwadfg
     1201 rngsflvvrq maqhvdafed ycrreaqrla amrghdgcdk dwigakmmgr wkdggsivrh
     1261 glsepgrepd nhfsytaedp dgrqcpygah vrranprdsl gpdretqial skrhrilrig
     1321 rtylrpggrg rpaekgmlfm clnaeierqf efvqqswvmr rsfqsltdeg dpfvgnpqgn
     1381 gtftipdrhg plvlkgldsf vtvrgggyff mpgraalahl larlsdqrsg vas
//
LOCUS       WP_235911964             171 aa            linear   BCT 02-MAR-2025
DEFINITION  LPS assembly lipoprotein LptE [Mesorhizobium xinjiangense].
ACCESSION   WP_235911964
VERSION     WP_235911964.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium xinjiangense
  ORGANISM  Mesorhizobium xinjiangense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 171)
  AUTHORS   Sperandeo,P., Lau,F.K., Carpentieri,A., De Castro,C., Molinaro,A.,
            Deho,G., Silhavy,T.J. and Polissi,A.
  TITLE     Functional analysis of the protein machinery required for transport
            of lipopolysaccharide to the outer membrane of Escherichia coli
  JOURNAL   J Bacteriol 190 (13), 4460-4469 (2008)
   PUBMED   18424520
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016290.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04390.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Mesorhizobium xinjiangense"
                     /db_xref="taxon:2678685"
     gene            1..171
                     /gene="lptE"
     Protein         1..171
                     /product="LPS assembly lipoprotein LptE"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /GO_process="GO:0043165 - Gram-negative-bacterium-type
                     cell outer membrane assembly [Evidence IEA]"
                     /calculated_mol_wt=18070
     Region          2..163
                     /region_name="COG5468"
                     /note="Predicted lipoprotein involved in
                     lipopolysaccharide assembly [Function unknown]"
                     /db_xref="CDD:444219"
ORIGIN      
        1 maaagllals sctvrplygv tvqsfgpasg ataglaaiai kpantryeqe vrnhlvfmfg
       61 ggagepsasr ysldlgvtsr resvvsvqrt tsdneptaga vrlrsrytlt dtatgeivas
      121 gersvrssyd iprqrfaalr aerdaedraa relaeqlrla laqnlgkisa r
//
LOCUS       WP_235911956             141 aa            linear   BCT 02-MAR-2025
DEFINITION  Rieske 2Fe-2S domain-containing protein [Mesorhizobium
            xinjiangense].
ACCESSION   WP_235911956
VERSION     WP_235911956.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium xinjiangense
  ORGANISM  Mesorhizobium xinjiangense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   Botelho,H.M., Leal,S.S., Veith,A., Prosinecki,V., Bauer,C.,
            Frohlich,R., Kletzin,A. and Gomes,C.M.
  TITLE     Role of a novel disulfide bridge within the all-beta fold of
            soluble Rieske proteins
  JOURNAL   J Biol Inorg Chem 15 (2), 271-281 (2010)
   PUBMED   19862563
REFERENCE   2  (residues 1 to 141)
  AUTHORS   Iwata,S., Saynovits,M., Link,T.A. and Michel,H.
  TITLE     Structure of a water soluble fragment of the 'Rieske' iron-sulfur
            protein of the bovine heart mitochondrial cytochrome bc1 complex
            determined by MAD phasing at 1.5 A resolution
  JOURNAL   Structure 4 (5), 567-579 (1996)
   PUBMED   8736555
REFERENCE   3  (residues 1 to 141)
  AUTHORS   Brandt,U., Yu,L., Yu,C.A. and Trumpower,B.L.
  TITLE     The mitochondrial targeting presequence of the Rieske iron-sulfur
            protein is processed in a single step after insertion into the
            cytochrome bc1 complex in mammals and retained as a subunit in the
            complex
  JOURNAL   J Biol Chem 268 (12), 8387-8390 (1993)
   PUBMED   8386158
REFERENCE   4  (residues 1 to 141)
  AUTHORS   Huang,J.T., Struck,F., Matzinger,D.F. and Levings,C.S. 3rd.
  TITLE     Functional analysis in yeast of cDNA coding for the mitochondrial
            Rieske iron-sulfur protein of higher plants
  JOURNAL   Proc Natl Acad Sci U S A 88 (23), 10716-10720 (1991)
   PUBMED   1961737
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012575.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00355.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Mesorhizobium xinjiangense"
                     /db_xref="taxon:2678685"
     Protein         1..141
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /GO_function="GO:0051537 - 2 iron, 2 sulfur cluster
                     binding [Evidence IEA]"
                     /calculated_mol_wt=15239
     Region          16..130
                     /region_name="Rieske"
                     /note="Rieske domain; a [2Fe-2S] cluster binding domain
                     commonly found in Rieske non-heme iron oxygenase (RO)
                     systems such as naphthalene and biphenyl dioxygenases, as
                     well as in plant/cyanobacterial chloroplast b6f and
                     mitochondrial cytochrome bc(1) complexes; cl00938"
                     /db_xref="CDD:445190"
     Site            order(58,60..61,77,79..80,82,84)
                     /site_type="other"
                     /note="iron-sulfur cluster [ion binding]"
                     /db_xref="CDD:239550"
     Site            order(58,60..61,77,80,82)
                     /site_type="other"
                     /note="[2Fe-2S] cluster binding site [ion binding]"
                     /db_xref="CDD:239550"
ORIGIN      
        1 mtdqidnget tapnawikaa asaglagprp viavtlygqr lvlfrddege lgligrhcph
       61 rgadlcfgrr ednglrcpfh gwhfdrtgqc veqpaepeds tmyktiklps ypvvekdgfi
      121 ltymgegepp aiagladaqq s
//
LOCUS       WP_235911971             326 aa            linear   BCT 02-MAR-2025
DEFINITION  esterase-like activity of phytase family protein [Mesorhizobium
            xinjiangense].
ACCESSION   WP_235911971
VERSION     WP_235911971.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium xinjiangense
  ORGANISM  Mesorhizobium xinjiangense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13449.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Mesorhizobium xinjiangense"
                     /db_xref="taxon:2678685"
     Protein         1..326
                     /product="esterase-like activity of phytase family
                     protein"
                     /calculated_mol_wt=35337
     Region          2..323
                     /region_name="COG4246"
                     /note="Uncharacterized conserved protein, contains a
                     phytase-like domain [Function unknown]"
                     /db_xref="CDD:443388"
ORIGIN      
        1 maalaigvla spasaenppe ameirsrpir afrigsdetr fgplqfvggl emtsyardfg
       61 slsgfsftep gtsfagvsdn gfwyfgrvvh daqgrplgla dfsmqpmldk sgdvigekwf
      121 tdaegiavrg dvatvsfere hklaefrlar egmgaelrsl pflipaeelr rnkgietiai
      181 apddgplaga rvvisersid tqgnvfatii egpqkgifkv arkdafditd gaflpdgdll
      241 vlersfsvas gvamrlrrlk gesvrpgmla dgpvlltadm syqidnmegl dvwrradgat
      301 mvsivsddnh silqrnlyle frldge
//
LOCUS       WP_235911974             515 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Mesorhizobium xinjiangense].
ACCESSION   WP_235911974
VERSION     WP_235911974.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium xinjiangense
  ORGANISM  Mesorhizobium xinjiangense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Mesorhizobium xinjiangense"
                     /db_xref="taxon:2678685"
     Protein         1..515
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=53100
     Region          25..423
                     /region_name="efflux_EmrB"
                     /note="drug resistance transporter, EmrB/QacA subfamily;
                     TIGR00711"
                     /db_xref="CDD:129794"
ORIGIN      
        1 meattttagv rpahrmfcpp agrrfvlisa ilassmgfid gsvvalampa iradlgaslv
       61 daqwisnaym lllsslvlig gaagdvygvr nifiagialf matsfacala pdsgwlitmr
      121 aaqgvgaalm vpgslsiiak ayppetrgra igtwaafssl ttaagpflsg mvlsfgapwm
      181 wrlifainvp iglvalamlf lrvpadrpag rrpldavgav lataslglla wgltafglsp
      241 dsrlaspwlw lvaalaaggl fiawerrava pmvklelfas kafsganlyt lvlffgfgav
      301 lfflpmtlvs awgvvewqas lvllplslfi aglssaagrl adrfgprlpl tlgaglvaas
      361 faglavtmel mmlwtvtlpv ftvmalgmai lvsplstavm laapdedagl asginnavar
      421 vaglmavaal gavagivfaa glpdgadvaf garpaadlpa dieamrvvas nnafrwvagi
      481 saamcfagac lawftqphwt tgpqrsadra tnrle
//
LOCUS       WP_235911993             355 aa            linear   BCT 02-MAR-2025
DEFINITION  LacI family DNA-binding transcriptional regulator [Mesorhizobium
            xinjiangense].
ACCESSION   WP_235911993
VERSION     WP_235911993.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium xinjiangense
  ORGANISM  Mesorhizobium xinjiangense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012576.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00356.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Mesorhizobium xinjiangense"
                     /db_xref="taxon:2678685"
     Protein         1..355
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=38657
     Region          16..88
                     /region_name="HTH_XRE"
                     /note="Helix-turn-helix XRE-family like proteins.
                     Prokaryotic DNA binding proteins belonging to the
                     xenobiotic response element family of transcriptional
                     regulators; cl22854"
                     /db_xref="CDD:473980"
     Site            order(19,27..31,33..34,37,45..46,49,62,65,68..69,71..72)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143331"
     Site            62..71
                     /site_type="active"
                     /note="domain linker motif [active]"
                     /db_xref="CDD:143331"
     Region          79..339
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mdkaraagdg ggskrttiyd iaeiagtsps avsavlngtw kkrrisekla eritriaede
       61 gyalnlqasv lrrersnivg mimpkydnry fgaiaeqfet rarqrglfpv itctqrepal
      121 eleaaralvs yqvecliatg atdpdrisef ctaagvrtin ldlpgslsps vvsdnfggar
      181 dltrvilsrv raelgtfepl yfiggrasdh ntaerlrgfr eahaeagldv pedcviirgy
      241 saekaeatld smdlpqrfgi fvnstitleg vvrwmqrndr ggigglrfgc fdwdpfaarl
      301 penvgmaeqd vphmleavfe midtrpatnv lravpcalhl psdrarhgag valtg
//
LOCUS       WP_235912076             517 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Mesorhizobium xinjiangense].
ACCESSION   WP_235912076
VERSION     WP_235912076.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium xinjiangense
  ORGANISM  Mesorhizobium xinjiangense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 517)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Mesorhizobium xinjiangense"
                     /db_xref="taxon:2678685"
     Protein         1..517
                     /product="AMP-binding protein"
                     /calculated_mol_wt=56097
     Region          19..510
                     /region_name="PRK12406"
                     /note="long-chain-fatty-acid--CoA ligase; Provisional"
                     /db_xref="CDD:183506"
ORIGIN      
        1 mrlaerless spadlaglii sgdrmlsqde lqrrgmkiat glkamgiqeg dsiavvlrnd
       61 fafletmlga niagvyvaav nwhasaeeaa hiladsgakl vvihadlmaq fgagipdgva
      121 vlqvstpqei atafrvaalp apvecdwddw rdshepydgp aaaprsniiy tsgttgnpkg
      181 ivrepavgdm aarvrevlsy syglspdepi rtaitgplyh sapnvytfha vrspggiail
      241 qprfdaeell aliqdyklth lhlvptmlvr llklnkevrd kydvsslryv vhgaapcppe
      301 vrramidwfg pvigeyygas etgaavalrp deadahadtv grptpwtrie iigtdgtpcr
      361 tgeigeifvk idrypsfeyr nrpgaadkvr rgdlvsagdi gyldaegylh lcdrksdmii
      421 sggvniypve ieaalidipg vrdaavfgip npefgesvaa cvateldvae lreqlarrla
      481 rykiprtfrl ieslpredsg kirkkklrea llaetak
//
LOCUS       WP_235912209              71 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF899 family protein [Ruania zhangjianzhongii].
ACCESSION   WP_235912209
VERSION     WP_235912209.1
KEYWORDS    RefSeq.
SOURCE      Ruania zhangjianzhongii
  ORGANISM  Ruania zhangjianzhongii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ruaniaceae; Ruania.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017771.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05988.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Ruania zhangjianzhongii"
                     /db_xref="taxon:2603206"
     Protein         1..71
                     /product="DUF899 family protein"
                     /calculated_mol_wt=7713
     Region          <2..40
                     /region_name="COG4312"
                     /note="Predicted dithiol-disulfide oxidoreductase, DUF899
                     family [General function prediction only]"
                     /db_xref="CDD:443453"
ORIGIN      
        1 mfqtyattgr gtethsyhws lldltaygrq etwessplgw pqtapyewrt vdgvplaahh
       61 rgggsccgsg e
//
LOCUS       WP_235912278             115 aa            linear   BCT 02-MAR-2025
DEFINITION  TadE/TadG family type IV pilus assembly protein [Ruania
            zhangjianzhongii].
ACCESSION   WP_235912278
VERSION     WP_235912278.1
KEYWORDS    RefSeq.
SOURCE      Ruania zhangjianzhongii
  ORGANISM  Ruania zhangjianzhongii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ruaniaceae; Ruania.
REFERENCE   1  (residues 1 to 115)
  AUTHORS   Kachlany,S.C., Planet,P.J., DeSalle,R., Fine,D.H. and Figurski,D.H.
  TITLE     Genes for tight adherence of Actinobacillus actinomycetemcomitans:
            from plaque to plague to pond scum
  JOURNAL   Trends Microbiol 9 (9), 429-437 (2001)
   PUBMED   11553455
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019428.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07811.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Ruania zhangjianzhongii"
                     /db_xref="taxon:2603206"
     Protein         1..115
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /calculated_mol_wt=12063
ORIGIN      
        1 mdfllvsvlv tvlvlgvvql altlhvrtsl idsaaegary aaldgnslad gaartrwlid
       61 sslpadyaqq vetgradyrd vqvvevhiaa pvpvlgllgp agmidvtgra vderr
//
LOCUS       WP_235912299             292 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Ruania zhangjianzhongii].
ACCESSION   WP_235912299
VERSION     WP_235912299.1
KEYWORDS    RefSeq.
SOURCE      Ruania zhangjianzhongii
  ORGANISM  Ruania zhangjianzhongii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ruaniaceae; Ruania.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Ruania zhangjianzhongii"
                     /db_xref="taxon:2603206"
     Protein         1..292
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=31056
     Region          6..142
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
     Region          154..289
                     /region_name="PIN_SF"
                     /note="PIN (PilT N terminus) domain: Superfamily; cl28905"
                     /db_xref="CDD:475124"
ORIGIN      
        1 mtgeewvecr cgmrhwgayg aaglllvdrv paqqvvlqhr aswthfgdsw gipggarhrg
       61 edatagalre aeeeagiaaa hvqllatrvl ahpdwsytta larvagpvdp qvtdsesaqi
      121 ewvdlgavpe lpllpafada wpelaamaat tatlivdaan vvgsrpdgww rdragattrl
      181 laqletwagh gvaadlldlp gqrwwpqivl vtegqarrvp aieggqvqvv aaerdgdtqi
      241 vaevaeriag agtqavcvvt adrelgqrie algarrirpr alldllgrsa ar
//
LOCUS       WP_235912415             515 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Ruania zhangjianzhongii].
ACCESSION   WP_235912415
VERSION     WP_235912415.1
KEYWORDS    RefSeq.
SOURCE      Ruania zhangjianzhongii
  ORGANISM  Ruania zhangjianzhongii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ruaniaceae; Ruania.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Ruania zhangjianzhongii"
                     /db_xref="taxon:2603206"
     Protein         1..515
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=52256
     Region          8..468
                     /region_name="PRK14995"
                     /note="SmvA family efflux MFS transporter"
                     /db_xref="CDD:184957"
ORIGIN      
        1 mptqasvrdw lgmavlvlpa llasmdlsvl fmaspwisad lqpsatqflw imdiygfmma
       61 gllitmgslg drigrrrlll igaaafgaas alaafatsaq lliaarallg lggatlapst
      121 lslirgmfld dsqrriavgi wtsafiggvs vgpivgglll ehfwwgsvfl invpvmvlll
      181 lvapvlires rdptpgkfdl lsavlslmsi lpvvygikta aergadwtav apivigagfg
      241 glfvarqlka drpmidirll rrpafagsii sngavvfaaa gmgllaasyt qtvldyapfa
      301 aavwmlptva gsfigvagas vlartisart lvplglliaa ggfagislvt psshigmlva
      361 gysaltlgvg ltatlatslv lttappedag aasalaetss efggavgiav lgtvtgavyr
      421 tsmtdhpdva eqvsaaaadt iggavavaqe lpehlatpll qqaftayteg ftvaalvgaa
      481 vlavaaigtg lllrrvpapp vpgaqeeghr vgsag
//
LOCUS       WP_235912443            1034 aa            linear   BCT 02-MAR-2025
DEFINITION  putative Ig domain-containing protein [Ruania zhangjianzhongii].
ACCESSION   WP_235912443
VERSION     WP_235912443.1
KEYWORDS    RefSeq.
SOURCE      Ruania zhangjianzhongii
  ORGANISM  Ruania zhangjianzhongii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ruaniaceae; Ruania.
REFERENCE   1  (residues 1 to 1034)
  AUTHORS   Bentley,S.D., Maiwald,M., Murphy,L.D., Pallen,M.J., Yeats,C.A.,
            Dover,L.G., Norbertczak,H.T., Besra,G.S., Quail,M.A., Harris,D.E.,
            von Herbay,A., Goble,A., Rutter,S., Squares,R., Squares,S.,
            Barrell,B.G., Parkhill,J. and Relman,D.A.
  TITLE     Sequencing and analysis of the genome of the Whipple's disease
            bacterium Tropheryma whipplei
  JOURNAL   Lancet 361 (9358), 637-644 (2003)
   PUBMED   12606174
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017183.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05345.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1034
                     /organism="Ruania zhangjianzhongii"
                     /db_xref="taxon:2603206"
     Protein         1..1034
                     /product="putative Ig domain-containing protein"
                     /calculated_mol_wt=101064
     Region          67..>225
                     /region_name="NosD"
                     /note="Nitrous oxide reductase accessory protein NosD,
                     contains tandem CASH domains [Inorganic ion transport and
                     metabolism]; COG3420"
                     /db_xref="CDD:442646"
     Region          <92..943
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          716..786
                     /region_name="choice_anch_Q"
                     /note="choice-of-anchor Q domain; NF041518"
                     /db_xref="CDD:469403"
ORIGIN      
        1 mqtvrpgpat rrrgdsgrag karagaaalg agalvllgav apaaaagatw yvdaangadt
       61 pdcgeqasaa catigaaldq staddtvsia pgtyveslvl sspvalvgsa davlvsdgag
      121 pavsvqgagi asvtgltisp dldgleyavv adggstvelt qvsiehqdga telgpgvraq
      181 nnssvvltdt avqaagsldp dggeprvgvs asngsdltia ssiitpataa gddetgsfag
      241 imlggftdtg gpstltmtgs tvsaggfanv lifqgsatia dtsipasepa staggygisi
      301 fdgsvdvtgg eitghagggi vhggmagplg laqvtvngtr iadngtdgea rtggiamlrq
      361 dattgpvgsl dvtnahlidn snaivthgvp ttvtasdisg sssgivaqda dlavmdsqlv
      421 gdsaaadqld sgvrsgnrge epvtltitdt eisnypvgls asavrvdvsa stiadnygag
      481 ivaqpgvvpe npdagdmsis dteitgngsl gvgpfgaglv igggsftatg vtiadnsngm
      541 ivgtgdvtla dssvtgsgad apddeaaagf gilsldgssn pdadftitgs eisgnraglg
      601 larstvvrns tiadntwygi naqaqtpgat iyltlsastm tgngteanpe adappfglgi
      661 gpgvqtllag svlaspsags acyvdgssgv ltdggynvvs datcaltedt sladtdpllg
      721 vlgdnggttq tvlpavdspa vdlipvgsta pgtalelcle gsmdqrgagf trpvgqacda
      781 gavevvfepa qittetlpgg ivgqaytglv eatggagepy swavtegdlp dgleldaatg
      841 eitgqpteag tfefsiqvdg vtsadfsvtv lpelvivtdt lpegtvgepy tatleatggd
      901 ggpytwgids gdlpegleld aatgeitgtp tsaesytftv vvgdpvykef tlevvpaeqe
      961 etpppeetap peetappadt pdepgdeapa aedgelavsg ieapltglav aalallmgsl
     1021 llvlrkagrl nldr
//
LOCUS       WP_235912492             394 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent monooxygenase [Ruania zhangjianzhongii].
ACCESSION   WP_235912492
VERSION     WP_235912492.1
KEYWORDS    RefSeq.
SOURCE      Ruania zhangjianzhongii
  ORGANISM  Ruania zhangjianzhongii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ruaniaceae; Ruania.
REFERENCE   1  (residues 1 to 394)
  AUTHORS   Schreuder,H.A., van der Laan,J.M., Swarte,M.B., Kalk,K.H., Hol,W.G.
            and Drenth,J.
  TITLE     Crystal structure of the reduced form of p-hydroxybenzoate
            hydroxylase refined at 2.3 A resolution
  JOURNAL   Proteins 14 (2), 178-190 (1992)
   PUBMED   1409567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01494.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Ruania zhangjianzhongii"
                     /db_xref="taxon:2603206"
     Protein         1..394
                     /product="FAD-dependent monooxygenase"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /calculated_mol_wt=40828
     Region          16..383
                     /region_name="PRK06753"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:168661"
ORIGIN      
        1 mtiaapavvv gggiaglaaa cglaragrqv rvleahsdfs evgtavalpt ngitalralg
       61 ateaeidelg tagygsgfrd qsgrallrip aprpgrdvaa vwgvhrqrlh glllaqalaa
      121 gvelvpgagv ssvdpgqrng rpaqlrwtga dgeqqlstdl lvgadgmfss vrsalyphar
      181 aaysgssswr glltdaslpa plvelwgpea efgimrispt qvywygyvrq degrhvadeh
      241 aavtdrfasf aplvhsviar trpedlmrhd vyhlppalpg ytrertvlvg daahgalptm
      301 gqgaataled gatlgslvda agtgpaalaa alagfdaerr prctaiarqa llmarfgadl
      361 rggwpqqvrn alvrlvpgal vvrsgaglvg wqvp
//
LOCUS       WP_235912661             166 aa            linear   BCT 02-MAR-2025
DEFINITION  TnpV protein [Velocimicrobium porci].
ACCESSION   WP_235912661
VERSION     WP_235912661.1
KEYWORDS    RefSeq.
SOURCE      Velocimicrobium porci
  ORGANISM  Velocimicrobium porci
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Velocimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025561.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14198.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Velocimicrobium porci"
                     /db_xref="taxon:2606634"
     Protein         1..166
                     /product="TnpV protein"
                     /calculated_mol_wt=19336
     Region          57..162
                     /region_name="TnpV"
                     /note="Transposon-encoded protein TnpV; pfam14198"
                     /db_xref="CDD:433767"
ORIGIN      
        1 msmtdkqkek aaripaigva geqpshmynk tiiadtvesg nlqtteevsm fermggqyee
       61 rdgifyplis meeehvdvgk yglfwmeymk seypqryvsl krccrlreka aevneeayri
      121 ldeitdkylk gkvehsdstm evwklreqar mmaeeiifae ivnqfh
//
LOCUS       WP_235912720             657 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Croceibacterium salegens].
ACCESSION   WP_235912720
VERSION     WP_235912720.1
KEYWORDS    RefSeq.
SOURCE      Croceibacterium salegens
  ORGANISM  Croceibacterium salegens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Croceibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12697.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Croceibacterium salegens"
                     /db_xref="taxon:1737568"
     Protein         1..657
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=70967
     Region          52..362
                     /region_name="FrmB"
                     /note="S-formylglutathione hydrolase FrmB [Defense
                     mechanisms]; COG0627"
                     /db_xref="CDD:440392"
     Region          398..628
                     /region_name="DAP2"
                     /note="Dipeptidyl aminopeptidase/acylaminoacyl peptidase
                     [Amino acid transport and metabolism]; COG1506"
                     /db_xref="CDD:441115"
ORIGIN      
        1 mserlhkkls fdrhivrtll alaalalasp tpvlaqvete kppvvegakp vvmerfkvhs
       61 psiegnlegn sadrdvivvl ppsyraspgr rypvlyalhg ysigaeqwiq eirvpqvvea
      121 afakgvpemi vvlpdsktlh ngsvysksvt tgdfedfvak dlvayvdshy rtiprresrg
      181 lvghsmggyg atrigmkhad vfgalyamsp gglqgrpmgp ynadvqtaid gvktldqvkd
      241 lpfparglla lssawspnpn rsplfldlpf kdgkpdpgvl erwtanspfa lldqyagdlk
      301 ryaaiamdvg dedglksdte elhkrllsyg ipnsfelyhg thtsrvafrf qdhvlqffgq
      361 hlsfevpppp sspeaagdkg sgpypaimev dpalpkhviy rpenlatlkg rklplyiwgn
      421 gactddaasv rnhllevash gylvmvpgyi geelarvqaa rgqrapgapp evptttqdlr
      481 dgldwaigen srggskyrgl ldtkavaasg fscggvqaid lassdprvta livqnsglfp
      541 ddgtpmlpgm dtpktalakl nmpvlyiqgg ptdiawangr ddynrliqlg qvpvamvglp
      601 tghggtyhdp hggaaamiai dwlewqlrgk qdaarsflgd ncrictvpaw tidrkgf
//
LOCUS       WP_235912851             530 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Croceibacterium salegens].
ACCESSION   WP_235912851
VERSION     WP_235912851.1
KEYWORDS    RefSeq.
SOURCE      Croceibacterium salegens
  ORGANISM  Croceibacterium salegens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Croceibacterium.
REFERENCE   1  (residues 1 to 530)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Croceibacterium salegens"
                     /db_xref="taxon:1737568"
     Protein         1..530
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=57850
     Region          277..512
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mplvllsapl haeddsavaa videglnrne allraqdlmd rigprltnsp gmrkaeewav
       61 kemaeiglsn ihkegfefgr gweqvrsdvw mlsprpielt aiplawtpgt dgriegevvv
      121 apmskkehfe ayrgklagki vlvskpgtgd epstapfnrl etsdiakrdt malptydpha
      181 iaereakgtl vrgdftlald eflrsegaia wakisyrdgk llhgsnytyl sgrtpqlpaf
      241 eiaaedyrrl arlsrvgpap rvsldsevrf tdddtkgyni igeipgsdpk agyimvgghf
      301 dswaagdgav dngastvail eaarilkatg akpkrtirfv lwsgeeqgll gsfayirqhi
      361 asrageenai pgaepsfwad swpitpkpgy selkayfnmd ngvgkirgih aegnvaaesl
      421 lgkwlkpfas lgaekvvsgs tsgtdhvffq rlglpafqfi qdpldysarl hhtnidtfdh
      481 ipaddlrqts tviagillqa andsatlpre plpkkpvetk pfewkypded
//
LOCUS       WP_235912923             397 aa            linear   BCT 02-MAR-2025
DEFINITION  carbohydrate porin [Oceanomicrobium pacificus].
ACCESSION   WP_235912923
VERSION     WP_235912923.1
KEYWORDS    RefSeq.
SOURCE      Oceanomicrobium pacificus
  ORGANISM  Oceanomicrobium pacificus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Oceanomicrobium.
REFERENCE   1  (residues 1 to 397)
  AUTHORS   Wylie,J.L. and Worobec,E.A.
  TITLE     The OprB porin plays a central role in carbohydrate uptake in
            Pseudomonas aeruginosa
  JOURNAL   J Bacteriol 177 (11), 3021-3026 (1995)
   PUBMED   7768797
REFERENCE   2  (residues 1 to 397)
  AUTHORS   Wylie,J.L., Bernegger-Egli,C., O'Neil,J.D. and Worobec,E.A.
  TITLE     Biophysical characterization of OprB, a glucose-inducible porin of
            Pseudomonas aeruginosa
  JOURNAL   J Bioenerg Biomembr 25 (5), 547-556 (1993)
   PUBMED   8132494
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016830.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04966.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Oceanomicrobium pacificus"
                     /db_xref="taxon:2692916"
     Protein         1..397
                     /product="carbohydrate porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /GO_process="GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /calculated_mol_wt=42893
     Region          <146..397
                     /region_name="OprB"
                     /note="Carbohydrate-selective porin, OprB family; cl17816"
                     /db_xref="CDD:473095"
ORIGIN      
        1 mtqrfllala llpaalmpaa vqaqgglsgp ssvaadltpg dgltdpqprs dfprsvmqeg
       61 fawkdglaeq glrfnldyla lgqwsdsdlg edragggilr fygawqatdt gsltfkvenr
      121 qaygavapqf hgfetgalsi tgtafndsgt iltnlfwtqr dpdgrwtlql gqidvtdfld
      181 vygmvspyta fqnlafntnp tinapnpglg iaggarigdn fyavgaiada ngnpaepdaq
      241 vfrtgetfks lelgytsgsd rlyfdnihlt awqsdaaedg sraedkglal saawfidnqw
      301 mpflragwsd gtaalyersl stglgwyrrn tdlagigfnw aeargiedtq ftselfyrfn
      361 ispdvqitps iqyisnplld pasdnltilg lrarvvf
//
LOCUS       WP_235912941             150 aa            linear   BCT 02-MAR-2025
DEFINITION  I78 family peptidase inhibitor [Oceanomicrobium pacificus].
ACCESSION   WP_235912941
VERSION     WP_235912941.1
KEYWORDS    RefSeq.
SOURCE      Oceanomicrobium pacificus
  ORGANISM  Oceanomicrobium pacificus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Oceanomicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023148.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11720.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Oceanomicrobium pacificus"
                     /db_xref="taxon:2692916"
     Protein         1..150
                     /product="I78 family peptidase inhibitor"
                     /calculated_mol_wt=14799
     Region          91..150
                     /region_name="Inhibitor_I78"
                     /note="Peptidase inhibitor I78 family; cl46679"
                     /db_xref="CDD:481019"
ORIGIN      
        1 mrlflpmial alatgvaacd eednsaaddg gttettette ssdaatdtst dtatdsaads
       61 gtdastdtas dseaeapadd atatadggde cgaaafaelv gqprsalegq tlpegtrvag
      121 ptdavtsdfn ptrlnittda ddvivkvecg
//
LOCUS       WP_235913053             254 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Oceanomicrobium pacificus].
ACCESSION   WP_235913053
VERSION     WP_235913053.1
KEYWORDS    RefSeq.
SOURCE      Oceanomicrobium pacificus
  ORGANISM  Oceanomicrobium pacificus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Oceanomicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Oceanomicrobium pacificus"
                     /db_xref="taxon:2692916"
     Protein         1..254
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=25556
     Region          14..254
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(22,24..25,27,46..48,87..89,136..138,152,156,
                     182..185)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(111,138,152,156)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mtgatskvve grlagqvacv taagqgigra iaerlaaega tvhasdldgt lldgldaasc
       61 savdatdaga vgrwldgigt vdcvahavgf vhhgtvegts dadwrksqsi cldsafhvtr
      121 aavplmkarg gsvtlvasla ssikgypfra aygaakggvi glmkacaady lqdgirfnai
      181 cpgvvdtpsl rariaalaee lggldaaeaw flerqpagrf arpeeiagtc awlasadagf
      241 vtgqtinvdg gisi
//
LOCUS       WP_235913079             209 aa            linear   BCT 02-MAR-2025
DEFINITION  OmpA family protein [Oceanomicrobium pacificus].
ACCESSION   WP_235913079
VERSION     WP_235913079.1
KEYWORDS    RefSeq.
SOURCE      Oceanomicrobium pacificus
  ORGANISM  Oceanomicrobium pacificus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Oceanomicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012894.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00691.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Oceanomicrobium pacificus"
                     /db_xref="taxon:2692916"
     Protein         1..209
                     /product="OmpA family protein"
                     /calculated_mol_wt=22056
     Region          70..170
                     /region_name="OmpA_C-like"
                     /note="Peptidoglycan binding domains similar to the
                     C-terminal domain of outer-membrane protein OmpA; cl30079"
                     /db_xref="CDD:453091"
     Site            order(75..76,109..110,113,117..118,121,162,166)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:143586"
ORIGIN      
        1 mntialksaa avlalavagc tteagdsafk negafgnsvt qneliqqayg vdpaalhsin
       61 aqfraaaphm infdfnssal gpdaraaldk qaawlranga vririyghtd avgspgynqa
      121 lgqrraqsav nylvargvsr srmdavasfg etrplintpn rerlnrrtvt eisgfvrgrg
      181 adfdgkvanr iyndyaagtt aevnvegie
//
LOCUS       WP_235913193             422 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Croceibacterium salegens].
ACCESSION   WP_235913193
VERSION     WP_235913193.1
KEYWORDS    RefSeq.
SOURCE      Croceibacterium salegens
  ORGANISM  Croceibacterium salegens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Croceibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Croceibacterium salegens"
                     /db_xref="taxon:1737568"
     Protein         1..422
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44396
     Region          20..381
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(27..28,31..32,35,67,117..118,120..122,125,146,
                     149..150,153,225,228..229,232..234,237,265,269,317..318,
                     322,326,343,346..347,350..351,354)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mqtnsentpd ggslvlkalv famfamfamt tdsvgtvipe virefdlglt aggsfqyatm
       61 sgiaisaial gfladrlgrk vtiliglimf glssaafaag hdflffvlll fvsglgigif
      121 ksgalaligd lsrstrehar tmnliegffg vgaiigpaiv aylvqvgasw kgvyliaall
      181 cgalilaaam akfprpiihr septrpteav rlagdptalf fgsalmlyva aeaaiyvwap
      241 tylaayegsw talaayavsi ffvlraagrf lgvwlparfd wtkvllacsa amaalfwvav
      301 vggrevaifa lpatglfmsv lyptinstgi scfdkgrhgs iaglllfftc isavfaplam
      361 galgdalgds kyaivlgavf atmlvaqctw nvlrqpfaar lierneddyr lnkaeaataa
      421 aa
//
LOCUS       WP_235913279             138 aa            linear   BCT 02-MAR-2025
DEFINITION  type II toxin-antitoxin system RelE/ParE family toxin [Brucella
            tritici].
ACCESSION   WP_235913279
VERSION     WP_235913279.1
KEYWORDS    RefSeq.
SOURCE      Brucella tritici (Ochrobactrum tritici)
  ORGANISM  Brucella tritici
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 138)
  AUTHORS   Shinohara,M., Guo,J.X., Mori,M., Nakashima,T., Takagi,H.,
            Nishimoto,E., Yamashita,S., Tsumoto,K., Kakuta,Y. and Kimura,M.
  TITLE     The structural mechanism of the inhibition of archaeal RelE toxin
            by its cognate RelB antitoxin
  JOURNAL   Biochem Biophys Res Commun 400 (3), 346-351 (2010)
   PUBMED   20728434
REFERENCE   2  (residues 1 to 138)
  AUTHORS   Francuski,D. and Saenger,W.
  TITLE     Crystal structure of the antitoxin-toxin protein complex RelB-RelE
            from Methanococcus jannaschii
  JOURNAL   J Mol Biol 393 (4), 898-908 (2009)
   PUBMED   19712680
REFERENCE   3  (residues 1 to 138)
  AUTHORS   Li,G.Y., Zhang,Y., Inouye,M. and Ikura,M.
  TITLE     Inhibitory mechanism of Escherichia coli RelE-RelB toxin-antitoxin
            module involves a helix displacement near an mRNA interferase
            active site
  JOURNAL   J Biol Chem 284 (21), 14628-14636 (2009)
   PUBMED   19297318
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06296.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Brucella tritici"
                     /db_xref="taxon:94626"
     Protein         1..138
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /calculated_mol_wt=15399
ORIGIN      
        1 mlldkctefl ylipmhtvie tpaylssakd envseeerne ivsflasnpd agdimagtgg
       61 arkvrfggrg kgksggyrii tfyadedipv flldiyskdt qanlskadrn elrkiltvlp
      121 qiwresvseq vkklrsrk
//
LOCUS       WP_235913281             326 aa            linear   BCT 02-MAR-2025
DEFINITION  RcnB family protein [Croceibacterium salegens].
ACCESSION   WP_235913281
VERSION     WP_235913281.1
KEYWORDS    RefSeq.
SOURCE      Croceibacterium salegens
  ORGANISM  Croceibacterium salegens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Croceibacterium.
REFERENCE   1  (residues 1 to 326)
  AUTHORS   Bleriot,C., Effantin,G., Lagarde,F., Mandrand-Berthelot,M.A. and
            Rodrigue,A.
  TITLE     RcnB is a periplasmic protein essential for maintaining
            intracellular Ni and Co concentrations in Escherichia coli
  JOURNAL   J Bacteriol 193 (15), 3785-3793 (2011)
   PUBMED   21665978
REFERENCE   2  (residues 1 to 326)
  AUTHORS   Iwig,J.S., Rowe,J.L. and Chivers,P.T.
  TITLE     Nickel homeostasis in Escherichia coli - the rcnR-rcnA efflux
            pathway and its linkage to NikR function
  JOURNAL   Mol Microbiol 62 (1), 252-262 (2006)
   PUBMED   16956381
REFERENCE   3  (residues 1 to 326)
  AUTHORS   Rodrigue,A., Effantin,G. and Mandrand-Berthelot,M.A.
  TITLE     Identification of rcnA (yohM), a nickel and cobalt resistance gene
            in Escherichia coli
  JOURNAL   J Bacteriol 187 (8), 2912-2916 (2005)
   PUBMED   15805538
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023204.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11776.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Croceibacterium salegens"
                     /db_xref="taxon:1737568"
     Protein         1..326
                     /product="RcnB family protein"
                     /calculated_mol_wt=38113
     Region          25..>235
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     Region          219..321
                     /region_name="RcnB"
                     /note="Periplasmic regulator RcnB of Ni and Co efflux
                     [Inorganic ion transport and metabolism]; COG5455"
                     /db_xref="CDD:444206"
     Region          272..319
                     /region_name="RcnB"
                     /note="Nickel/cobalt transporter regulator; pfam11776"
                     /db_xref="CDD:432066"
ORIGIN      
        1 mtigkfftgg avaaiaaala lastpvaard vrenmgrswq sgsssksdna rqsrsdnars
       61 qqrsqptarq papqqqqqqr ssppvrqapq arqrdnrgtp qvaqrdtsrg nersgnngqr
      121 gngwnrggng tppatrnvpa parnatyadg nrnrtysdnd rnrsydgrnr sydgrrgndn
      181 rstyrdgyrd grqadrrddr rdnraaynng rrdgyrdgqr dhrrwdnhgw rndrrydwrn
      241 yrnahrstyr lgiyyapyrn yyyrrlnigf fldslfysnr ywindpwnyr lpdvygpyrw
      301 vryyddallv dmytgevvdv iydffw
//
LOCUS       WP_235913339             119 aa            linear   BCT 02-MAR-2025
DEFINITION  type II restriction endonuclease [Brucella tritici].
ACCESSION   WP_235913339
VERSION     WP_235913339.1
KEYWORDS    RefSeq.
SOURCE      Brucella tritici (Ochrobactrum tritici)
  ORGANISM  Brucella tritici
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 119)
  AUTHORS   Zhou,X.E., Wang,Y., Reuter,M., Mucke,M., Kruger,D.H., Meehan,E.J.
            and Chen,L.
  TITLE     Crystal structure of type IIE restriction endonuclease EcoRII
            reveals an autoinhibition mechanism by a novel effector-binding
            fold
  JOURNAL   J Mol Biol 335 (1), 307-319 (2004)
   PUBMED   14659759
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020588.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09019.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Brucella tritici"
                     /db_xref="taxon:94626"
     Protein         1..119
                     /product="type II restriction endonuclease"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0009036 - type II site-specific
                     deoxyribonuclease activity [Evidence IEA]"
                     /GO_process="GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /calculated_mol_wt=13358
     Region          <19..113
                     /region_name="EcoRII-C"
                     /note="EcoRII C terminal; pfam09019"
                     /db_xref="CDD:401096"
ORIGIN      
        1 mvhvmvhvni dqatdiesdg lvpnitayed asfpahrlrm laakttckdr wrqiinever
       61 irtkhrltlq egvseaqfre mtevgvslvv pagihdayle avrphlitle efigdvrta
//
LOCUS       WP_235913408             385 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Brucella tritici].
ACCESSION   WP_235913408
VERSION     WP_235913408.1
KEYWORDS    RefSeq.
SOURCE      Brucella tritici (Ochrobactrum tritici)
  ORGANISM  Brucella tritici
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Brucella tritici"
                     /db_xref="taxon:94626"
     Protein         1..385
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=42053
     Region          <152..323
                     /region_name="YnjB"
                     /note="ABC-type uncharacterized transport system YnjBCD,
                     periplasmic component [General function prediction only];
                     COG4134"
                     /db_xref="CDD:443309"
ORIGIN      
        1 magagfatga glllpkgaaw aqsaklpssp valnvidaag nlaltqpifd nfaseqkalv
       61 srftfnkapa pelpgkikaq qranrididm vivgpdalsa gladdiwsdi ialpdnglpk
      121 lqdiylepaw rmqemskgkg vvvsyypsgp lleyhpekvk tppktaeell awtkenpnkf
      181 iyarpansgp grtflmglpy llgdsdpkdp vkgwdktway lkelhkniey ypagtgalmk
      241 elgegtrdmt vtttgwdinp ralgvvpkem gvsklegfhw vcdahyfaip kgvseekiav
      301 lmefikfslk pdqqaysyda gyfypgpavk dvtiemapke sqniiaefgr peyadwiann
      361 pielplepea lvaafrrwde dvaag
//
LOCUS       WP_235913415             497 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein [Brucella tritici].
ACCESSION   WP_235913415
VERSION     WP_235913415.1
KEYWORDS    RefSeq.
SOURCE      Brucella tritici (Ochrobactrum tritici)
  ORGANISM  Brucella tritici
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 497)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Brucella tritici"
                     /db_xref="taxon:94626"
     Protein         1..497
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=54267
     Region          40..196
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(44..50,158)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          <455..497
                     /region_name="COG3972"
                     /note="Superfamily I DNA and RNA helicases [Replication,
                     recombination and repair]"
                     /db_xref="CDD:443172"
ORIGIN      
        1 maltfrmqmc isemqqrlcs rglampepei dlltiakgtv tapagcgkth liaealtrhs
       61 grkpilvlth tnagvvalrg rldragvpsn ayrlstidgw amrlismfpq rgaydpnilk
      121 lanarsdypn irvaamnllk aghinevlaa syerlivdey qdcsirqhav vayaaqtlpt
      181 cvlgdpmqai fgfgsdqlas wdehvckhfp iageletpwr winagkedfg rwllkvrkkl
      241 lnseaidltt apaelcwvhl dgtedmvrqm raarttppta egrvliigrs tspqsqrdma
      301 srtpgavtve nvdlrdfvdf akrfdfratd afaklatfag evmtnvgapd liarvrslqn
      361 gtarkaasda eqaalsfcan pspksaanli veinklggvr qhrpavvrac vkaleqcdgt
      421 dgntfydaav rireqhrlig rplakrsvgs tlllkglead vcvileahel daknlyvamt
      481 rgsaklvlcs ksnqmqp
//
LOCUS       WP_235913514             181 aa            linear   BCT 02-MAR-2025
DEFINITION  transglycosylase SLT domain-containing protein [Teichococcus
            coralli].
ACCESSION   WP_235913514
VERSION     WP_235913514.1
KEYWORDS    RefSeq.
SOURCE      Teichococcus coralli
  ORGANISM  Teichococcus coralli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Roseomonas.
REFERENCE   1  (residues 1 to 181)
  AUTHORS   Koraimann,G.
  TITLE     Lytic transglycosylases in macromolecular transport systems of
            Gram-negative bacteria
  JOURNAL   Cell Mol Life Sci 60 (11), 2371-2388 (2003)
   PUBMED   14625683
REFERENCE   2  (residues 1 to 181)
  AUTHORS   Mushegian,A.R., Fullner,K.J., Koonin,E.V. and Nester,E.W.
  TITLE     A family of lysozyme-like virulence factors in bacterial pathogens
            of plants and animals
  JOURNAL   Proc Natl Acad Sci U S A 93 (14), 7321-7326 (1996)
   PUBMED   8692991
REFERENCE   3  (residues 1 to 181)
  AUTHORS   Thunnissen,A.M., Rozeboom,H.J., Kalk,K.H. and Dijkstra,B.W.
  TITLE     Structure of the 70-kDa soluble lytic transglycosylase complexed
            with bulgecin A. Implications for the enzymatic mechanism
  JOURNAL   Biochemistry 34 (39), 12729-12737 (1995)
   PUBMED   7548026
REFERENCE   4  (residues 1 to 181)
  AUTHORS   Koonin,E.V. and Rudd,K.E.
  TITLE     A conserved domain in putative bacterial and bacteriophage
            transglycosylases
  JOURNAL   Trends Biochem Sci 19 (3), 106-107 (1994)
   PUBMED   8203016
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013618.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01464.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Teichococcus coralli"
                     /db_xref="taxon:2545983"
     Protein         1..181
                     /product="transglycosylase SLT domain-containing protein"
                     /calculated_mol_wt=18938
     Region          <14..130
                     /region_name="MltE"
                     /note="Soluble lytic murein transglycosylase or regulatory
                     protein s (may contain LysM/invasin domain) [Cell
                     wall/membrane/envelope biogenesis]; COG0741"
                     /db_xref="CDD:440504"
ORIGIN      
        1 msspasagpr sacldaaraa earydlpdgl lvaialaesg lhahalnidg rayypdsrae
       61 arrllagasa rqsvmagcvq vnaqvhaang sdwpldpqka atwaarylrq qyeasgnwpd
      121 alrrwngagp adnrlvcrve aklqvvapgs tvlgepscgg tpmararrdg rallelaeap
      181 d
//
LOCUS       WP_235913948             232 aa            linear   BCT 02-MAR-2025
DEFINITION  polysaccharide deacetylase family protein [Teichococcus coralli].
ACCESSION   WP_235913948
VERSION     WP_235913948.1
KEYWORDS    RefSeq.
SOURCE      Teichococcus coralli
  ORGANISM  Teichococcus coralli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Roseomonas.
REFERENCE   1  (residues 1 to 232)
  AUTHORS   Freiberg,C., Fellay,R., Bairoch,A., Broughton,W.J., Rosenthal,A.
            and Perret,X.
  TITLE     Molecular basis of symbiosis between Rhizobium and legumes
  JOURNAL   Nature 387 (6631), 394-401 (1997)
   PUBMED   9163424
REFERENCE   2  (residues 1 to 232)
  AUTHORS   Mishra,C., Semino,C.E., McCreath,K.J., de la Vega,H., Jones,B.J.,
            Specht,C.A. and Robbins,P.W.
  TITLE     Cloning and expression of two chitin deacetylase genes of
            Saccharomyces cerevisiae
  JOURNAL   Yeast 13 (4), 327-336 (1997)
   PUBMED   9133736
REFERENCE   3  (residues 1 to 232)
  AUTHORS   Millward-Sadler,S.J., Poole,D.M., Henrissat,B., Hazlewood,G.P.,
            Clarke,J.H. and Gilbert,H.J.
  TITLE     Evidence for a general role for high-affinity non-catalytic
            cellulose binding domains in microbial plant cell wall hydrolases
  JOURNAL   Mol Microbiol 11 (2), 375-382 (1994)
   PUBMED   8170399
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013672.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01522.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Teichococcus coralli"
                     /db_xref="taxon:2545983"
     Protein         1..232
                     /product="polysaccharide deacetylase family protein"
                     /GO_function="GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=26031
     Region          47..>204
                     /region_name="CE4_SF"
                     /note="Catalytic NodB homology domain of the carbohydrate
                     esterase 4 superfamily; cl15692"
                     /db_xref="CDD:472828"
ORIGIN      
        1 mtqdnpsdps rmepwqwpdr hwqglirqvr agrplrprqw pggarcaval sfdsdhetne
       61 lreggksigr mawgqygnrv gvpriaklld rhgiratfyv pavaaltypd eqrglvaagh
      121 eigihgwihe lnsvlpyeae rdlmfratda leritgarpv glrtpswdfs pntlrierel
      181 gllydsslma dedcyelemx ptrtatswkw rasrpasssc rwsgcattrc ts
//
LOCUS       WP_235914008             169 aa            linear   BCT 02-MAR-2025
DEFINITION  FliM/FliN family flagellar motor switch protein [Curvivirga
            aplysinae].
ACCESSION   WP_235914008
VERSION     WP_235914008.1
KEYWORDS    RefSeq.
SOURCE      Curvivirga aplysinae
  ORGANISM  Curvivirga aplysinae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodospirillales; Aestuariispiraceae; Curvivirga.
REFERENCE   1  (residues 1 to 169)
  AUTHORS   Paul,K. and Blair,D.F.
  TITLE     Organization of FliN subunits in the flagellar motor of Escherichia
            coli
  JOURNAL   J Bacteriol 188 (7), 2502-2511 (2006)
   PUBMED   16547037
REFERENCE   2  (residues 1 to 169)
  AUTHORS   Brown,P.N., Mathews,M.A., Joss,L.A., Hill,C.P. and Blair,D.F.
  TITLE     Crystal structure of the flagellar rotor protein FliN from
            Thermotoga maritima
  JOURNAL   J Bacteriol 187 (8), 2890-2902 (2005)
   PUBMED   15805535
REFERENCE   3  (residues 1 to 169)
  AUTHORS   Chen,L.M., Kaniga,K. and Galan,J.E.
  TITLE     Salmonella spp. are cytotoxic for cultured macrophages
  JOURNAL   Mol Microbiol 21 (5), 1101-1115 (1996)
   PUBMED   8885278
REFERENCE   4  (residues 1 to 169)
  AUTHORS   Bischoff,D.S. and Ordal,G.W.
  TITLE     Identification and characterization of FliY, a novel component of
            the Bacillus subtilis flagellar switch complex
  JOURNAL   Mol Microbiol 6 (18), 2715-2723 (1992)
   PUBMED   1447979
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013236.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01052.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Curvivirga aplysinae"
                     /db_xref="taxon:2529852"
     Protein         1..169
                     /product="FliM/FliN family flagellar motor switch protein"
                     /calculated_mol_wt=17317
     Region          7..162
                     /region_name="FliN"
                     /note="Flagellar motor switch/type III secretory pathway
                     protein FliN [Cell motility, Intracellular trafficking,
                     secretion, and vesicular transport]; COG1886"
                     /db_xref="CDD:441490"
     Region          <91..164
                     /region_name="PRK08916"
                     /note="flagellar motor switch protein FliN"
                     /db_xref="CDD:236350"
ORIGIN      
        1 mnlrsiptmm gdeedfdend mmaaieaeqa eaaagggddm efdeddmmaa iqaeqaergg
       61 gggagggsgg gdgpvdmggg spldgielvs avekigidit avlgtaemkv snllkigrga
      121 vieldrhvgd tvelrvagrp iargevvvve dhlavsvtev fkrgmyhdt
//
LOCUS       WP_235914142             259 aa            linear   BCT 02-MAR-2025
DEFINITION  PEP-CTERM sorting domain-containing protein [Rugamonas rivuli].
ACCESSION   WP_235914142
VERSION     WP_235914142.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas rivuli
  ORGANISM  Rugamonas rivuli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
REFERENCE   1  (residues 1 to 259)
  AUTHORS   Haft,D.H., Paulsen,I.T., Ward,N. and Selengut,J.D.
  TITLE     Exopolysaccharide-associated protein sorting in environmental
            organisms: the PEP-CTERM/EpsH system. Application of a novel
            phylogenetic profiling heuristic
  JOURNAL   BMC Biol 4, 29 (2006)
   PUBMED   16930487
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019225.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07589.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Rugamonas rivuli"
                     /db_xref="taxon:2743358"
     Protein         1..259
                     /product="PEP-CTERM sorting domain-containing protein"
                     /calculated_mol_wt=26835
     Region          <232..256
                     /region_name="PEP_CTERM_FxDxF"
                     /note="FxDxF family PEP-CTERM protein; NF038126"
                     /db_xref="CDD:468369"
ORIGIN      
        1 mklqflagvv amvgltglah adgftnggfe agstagwttg ggyrgnvlna gllpadflpg
       61 gslngdtgnr gqvidasyvd pnlgallgst vhsgkyayra edttnggnat visqkvsnyt
      121 esniyfawka vlqngghved esalmmltlt ddttgqllis rsynagfsgs gvdsrfsteg
      181 sifytptwqv eqlsidqsls ghsftlslla adcnptghtg yayldgfgsa ppvpepttyg
      241 mmlaglgllg fmarrkksa
//
LOCUS       WP_235914217             225 aa            linear   BCT 02-MAR-2025
DEFINITION  PEP-CTERM sorting domain-containing protein [Rugamonas rivuli].
ACCESSION   WP_235914217
VERSION     WP_235914217.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas rivuli
  ORGANISM  Rugamonas rivuli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
REFERENCE   1  (residues 1 to 225)
  AUTHORS   Haft,D.H., Paulsen,I.T., Ward,N. and Selengut,J.D.
  TITLE     Exopolysaccharide-associated protein sorting in environmental
            organisms: the PEP-CTERM/EpsH system. Application of a novel
            phylogenetic profiling heuristic
  JOURNAL   BMC Biol 4, 29 (2006)
   PUBMED   16930487
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019225.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07589.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Rugamonas rivuli"
                     /db_xref="taxon:2743358"
     Protein         1..225
                     /product="PEP-CTERM sorting domain-containing protein"
                     /calculated_mol_wt=23611
     Region          <191..218
                     /region_name="PEP_CTERM_MHFG"
                     /note="MHFG family PEP-CTERM protein; NF038119"
                     /db_xref="CDD:468362"
ORIGIN      
        1 mtikfntaik aaavaaalaf ssvgqaasit gempgaveyl nfdanffgni avtitpwkfe
       61 iggvetlafc idqdtsavyh vnygatpvvp sqaimglyet nykyvlnngv ynadkaaafq
      121 lalwelkddq sftnptgnmv lpltgglnpg ndalaadaya mladalnyhg lggsylytey
      181 taagtqslmg vsavpeadtw ammavglglv gligrrksek sekfa
//
LOCUS       WP_235914222             358 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Rugamonas rivuli].
ACCESSION   WP_235914222
VERSION     WP_235914222.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas rivuli
  ORGANISM  Rugamonas rivuli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14559.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Rugamonas rivuli"
                     /db_xref="taxon:2743358"
     Protein         1..358
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=37966
     Region          175..>315
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Site            order(179..180,183..184,186,210,214..215,218,220..221,244,
                     247..248,251..252,255)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          179..203
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          208..238
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          274..304
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mlqdldargg agdgalrqqq lhavggqvrd krplviagsl alaavvvggg wfgwqywqsh
       61 raaslpavaq vaakppapva papaaasqpa avkvaamppe pmatqeaaap aphkpaavpa
      121 apaatphvaa shdaphavpa paerkpvrqa aarssddavg ntgtithdis pkqmaentyr
      181 rglvalqegr vnaaladfdr aleidprnea arqtnislll eqkrnedavr qlrlalgidp
      241 rqpglamvla rlqlekggpa letlmttlpy agnsaeyqaf lagvlqreqr hteaadhyre
      301 alrlmpqngv wwmglgislq admhlpeare ayrraraang lspelqafid rkieslsr
//
LOCUS       WP_235914254             146 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2844 domain-containing protein [Rugamonas rivuli].
ACCESSION   WP_235914254
VERSION     WP_235914254.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas rivuli
  ORGANISM  Rugamonas rivuli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022458.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11005.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Rugamonas rivuli"
                     /db_xref="taxon:2743358"
     Protein         1..146
                     /product="DUF2844 domain-containing protein"
                     /calculated_mol_wt=14810
     Region          12..145
                     /region_name="DUF2844"
                     /note="Protein of unknown function (DUF2844); pfam11005"
                     /db_xref="CDD:431598"
ORIGIN      
        1 mlllsllqga layaalgssp snfgtapvrq garalataga ggtavytvsq stldsgtvvr
       61 eymnaegvvf avswngpalp dlrtllgdkf avltstaakr pkaghsqlav eqqdvvivsg
      121 ghmrayagha wipgtlpagf dtsvie
//
LOCUS       WP_235914263             498 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma 54-interacting transcriptional regulator [Rugamonas rivuli].
ACCESSION   WP_235914263
VERSION     WP_235914263.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas rivuli
  ORGANISM  Rugamonas rivuli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
REFERENCE   1  (residues 1 to 498)
  AUTHORS   Studholme,D.J. and Dixon,R.
  TITLE     Domain architectures of sigma54-dependent transcriptional
            activators
  JOURNAL   J Bacteriol 185 (6), 1757-1767 (2003)
   PUBMED   12618438
REFERENCE   2  (residues 1 to 498)
  AUTHORS   Chaney,M., Grande,R., Wigneshweraraj,S.R., Cannon,W., Casaz,P.,
            Gallegos,M.T., Schumacher,J., Jones,S., Elderkin,S., Dago,A.E.,
            Morett,E. and Buck,M.
  TITLE     Binding of transcriptional activators to sigma 54 in the presence
            of the transition state analog ADP-aluminum fluoride: insights into
            activator mechanochemical action
  JOURNAL   Genes Dev 15 (17), 2282-2294 (2001)
   PUBMED   11544185
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00158.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Rugamonas rivuli"
                     /db_xref="taxon:2743358"
     Protein         1..498
                     /product="sigma 54-interacting transcriptional regulator"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008134 - transcription factor binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=53917
     Region          61..486
                     /region_name="PRK15115"
                     /note="response regulator GlrR; Provisional"
                     /db_xref="CDD:185070"
ORIGIN      
        1 msaraddmtt gadpaagsqr repgsltrer dngaprsada gqgahlllvd ddadllrlls
       61 mrltangyrv tavgsaeaal armsielprl visdirlpdr dgmslfqeir htypalpvil
      121 ltahgtipda veattlgaya yltkpfdakt llerivqals lsapepgpas gdhawragli
      181 srsqcmdell aearlvaasd asilirgesg tgkellanai hrasrrskap fiavncgaip
      241 ealleselfg hvkgaytgav asregllqaa dggtlfldei gdmplllqvk llrvlqervv
      301 rqlgsdiarp vdvrilsath rdldvamqeg qfredlyyrl nvitltlppl sqrrediapm
      361 atqflqtlaa kygktvrgya pgalealtta awpgnvrqly nvvehvcala taplvplslv
      421 qralrvpsle vlsyteakqr fernylvqll kltdgnvada arlaernrte fyrllqkhdl
      481 daslfradga avaaerqe
//
LOCUS       WP_235914356              73 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6434 domain-containing protein [Rugamonas rivuli].
ACCESSION   WP_235914356
VERSION     WP_235914356.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas rivuli
  ORGANISM  Rugamonas rivuli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039782.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20026.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Rugamonas rivuli"
                     /db_xref="taxon:2743358"
     Protein         1..73
                     /product="DUF6434 domain-containing protein"
                     /calculated_mol_wt=8437
     Region          4..67
                     /region_name="DUF6434"
                     /note="Domain of unknown function (DUF6434); pfam20026"
                     /db_xref="CDD:466263"
ORIGIN      
        1 mmkfdwhgae israteidad yrntqnvrrf lsgqcgpdfk fdrelmawvr sgaaknmgdv
       61 adewtrrrer gra
//
LOCUS       WP_235914363            1641 aa            linear   BCT 02-MAR-2025
DEFINITION  two-component regulator propeller domain-containing protein
            [Rugamonas rivuli].
ACCESSION   WP_235914363
VERSION     WP_235914363.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas rivuli
  ORGANISM  Rugamonas rivuli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
REFERENCE   1  (residues 1 to 1641)
  AUTHORS   Lowe,E.C., Basle,A., Czjzek,M., Firbank,S.J. and Bolam,D.N.
  TITLE     A scissor blade-like closing mechanism implicated in transmembrane
            signaling in a Bacteroides hybrid two-component system
  JOURNAL   Proc Natl Acad Sci U S A 109 (19), 7298-7303 (2012)
   PUBMED   22532667
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019135.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07494.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1641
                     /organism="Rugamonas rivuli"
                     /db_xref="taxon:2743358"
     Protein         1..1641
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /calculated_mol_wt=181635
     Region          6..958
                     /region_name="COG3292"
                     /note="Periplasmic ligand-binding sensor domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:442521"
     Region          903..1057
                     /region_name="GAF_2"
                     /note="GAF domain; pfam13185"
                     /db_xref="CDD:433019"
     Region          <1043..1611
                     /region_name="TMAO_torS"
                     /note="TMAO reductase sytem sensor TorS; TIGR02956"
                     /db_xref="CDD:274362"
ORIGIN      
        1 mgtaaawaga pprtlrfeql svehglaqes vlaiaqdkqg fiwlgtqagl trfdgyrtvt
       61 yksavsdprs ladnwvrvlh ldrsgqlwvg tdggldryda atktfthflp hesaqrgngn
      121 rhvraiaddg lgglwlasad glhhfdpvsk rftswhhdpa dagslandqv nalardaagr
      181 lwvatatgld mlapgesrfq hftidasgds kynavlalqv dsaqtlwvgt lggleqwrll
      241 gkepqrrrlg tregmkpgms ittlyvdaet nvwvgtqadg llrwlpaenr lvqylhqfsd
      301 shsvadnqis alfrdrvgtf wvgtwndgas rvdlgsggfa rivrqadipn tlsdnkvrai
      361 vaeargqlwl gssgglnlyd pvigegkvwr hdplransls ddqvtalwre kngnmwiggr
      421 agvnhlnven gaikalsfvr gdpasdtirn ivgdrsgilw iasrgglhrl dpqsmevrtf
      481 rhdpsdmssl adnvvrpile drkgqlwigt fngldlldrk tgkfrhfrrd aadpfslshd
      541 evhylyedgr giiwvgtaag lnkmevaadg girfrrylrk dgiaddaias ilpddagnlw
      601 lstnsglsrl ntetglvrny sgadgtiega yfdgaalrtp dgtlyfggfn gitafsppev
      661 rensvaptva itdfqifnks lkpgqgehpd vlkvaiehtn altllegdsv fslefaalhy
      721 aapqrnrfay qlqgfdedwv vtdstkrfat ytnldpgkyt frvkaankdg iwndnaatld
      781 itilppfwka wwfrglfgva lagaayaayh arvrslhhqq qrleelvsar taevehknql
      841 lqqqkqeleq rrleaeaqra eaeqrrvdte rqkeeverqk enveqahrni svlselgrem
      901 satldmettm rtlyrhvhhl mnaqifgigf vreedgvidf pfaieagvrt lpyqrlldqp
      961 nqlavwclte rkpvfindfe seyrdymdes gldtlvpcir edgvpaavar smmyapliis
     1021 dkvvgllcvq slekdayqqv hmdmlqtlas haaaglenar ayqqleealq tlrqtqeqlm
     1081 qqerqvrlht eelalanral qenderlrla kqkaedatrq kseflanmsh emrtplagvi
     1141 gmlgfalrds rlavstreqi lrgqanaqsl lsiindlldf skieagklti enidfslssa
     1201 venvvslfee qaaahsvgfs lefgeglpqf vvgdptrlrq vlvnlvgnaf kftekgsvrm
     1261 rvervpqedd eraragfkga lnrirfcvsd tgigieadai prlfqqfeqa dasttrrygg
     1321 tglglaicrq lvelmggsin avstpgdgst fsfelplang vpppmvphvp rephshqlkv
     1381 lcaedfptnq iiirmmledl ghkvdiaang alavkacslt rydlilmdgr mpemdgasat
     1441 rlirsggtea apvrdqelmi ialtanasee drsrylasgm ddfltkpide dklhfqlsra
     1501 ierqlqrgfk lplmeprhnp algtpeldtl fgvapasdep arlaqhsggs dlklrlrsaf
     1561 nqdaplrlae leraveqada dtasrllhgm kgsagyleeq elqalcgele ldadhgnwpr
     1621 iaeampqlre lllragaasa l
//
LOCUS       WP_235914453             440 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3472 domain-containing protein [Rugamonas rivuli].
ACCESSION   WP_235914453
VERSION     WP_235914453.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas rivuli
  ORGANISM  Rugamonas rivuli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023384.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11958.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Rugamonas rivuli"
                     /db_xref="taxon:2743358"
     Protein         1..440
                     /product="DUF3472 domain-containing protein"
                     /calculated_mol_wt=46812
     Region          56..240
                     /region_name="DUF5077"
                     /note="Domain of unknown function (DUF5077); pfam16871"
                     /db_xref="CDD:435619"
     Region          246..409
                     /region_name="DUF3472"
                     /note="Domain of unknown function (DUF3472); pfam11958"
                     /db_xref="CDD:432221"
ORIGIN      
        1 mmkqqsfflv caawmlsacg gtsadgqgtq taakvvmggp sasvaaassk avalagnafi
       61 tsapadaeee indnglanws npatvtsayf rmasagqvtl gldarlagsn nstirvtvng
      121 tpflvklsvn gartypvgtv nvaapgyvkv dlqgvskdgg yfgdvsalrv ttsatinyan
      181 dpanyywsrr gpsvhmgytt panteyfyne vtvpagqdpe gsyymangfg qgyfgiqvks
      241 pserwvlfsv wdpdgggktt lvkkgagvvd nsfggegtgg qsylsynwis gntyrfitra
      301 rpdgagatdy sawfyapelg vwrfiatwkr patttyltga ysflenfidt kgytgrrvsf
      361 gnqwarnvsg awsevtkarf tgdatvtnvq rmdyaggldn gqfylrnggf fgdyvpvnqn
      421 ftraatgqqp avdvttlpqq
//
LOCUS       WP_235914494             201 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF2799 domain-containing protein [Dickeya].
ACCESSION   WP_235914494
VERSION     WP_235914494.1
KEYWORDS    RefSeq.
SOURCE      Dickeya
  ORGANISM  Dickeya
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022426.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10973.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Dickeya"
                     /db_xref="taxon:204037"
     Protein         1..201
                     /product="DUF2799 domain-containing protein"
                     /calculated_mol_wt=22018
     Region          94..199
                     /region_name="DUF2799"
                     /note="Protein of unknown function (DUF2799); cl19633"
                     /db_xref="CDD:450344"
ORIGIN      
        1 maytnhnrkv fytqlilyai nipyslstsr lkgefrrsiw qqkamnsrsl seiikgktgn
       61 cvilgvfiyp aangtgsimr ngmvlvglll lvgcqpppst sptknghsaw yeagyndass
      121 glivkddetl sewfgnpdvd rhayldgyqa gqrawcnssn ietwgragkp fppscdgand
      181 aetlkkvwqr aadalpshss r
//
LOCUS       WP_235914511             191 aa            linear   BCT 02-MAR-2025
DEFINITION  SRPBCC family protein [Rugamonas rivuli].
ACCESSION   WP_235914511
VERSION     WP_235914511.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas rivuli
  ORGANISM  Rugamonas rivuli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
REFERENCE   1  (residues 1 to 191)
  AUTHORS   Nakabayashi,M., Shibata,N., Komori,H., Ueda,Y., Iino,H.,
            Ebihara,A., Kuramitsu,S. and Higuchi,Y.
  TITLE     Structure of a conserved hypothetical protein, TTHA0849 from
            Thermus thermophilus HB8, at 2.4 A resolution: a putative member of
            the StAR-related lipid-transfer (START) domain superfamily
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 61 (Pt 12),
            1027-1031 (2005)
   PUBMED   16511226
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015331.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03364.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Rugamonas rivuli"
                     /db_xref="taxon:2743358"
     Protein         1..191
                     /product="SRPBCC family protein"
                     /calculated_mol_wt=21258
     Region          45..183
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(45,47,49,58..60,62..63,78,85,87,89,91,103,105,107,
                     119,121,135..136,138,140,148,150,152,154,165..169,
                     171..172,175..177,180)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176875"
ORIGIN      
        1 mmrfllflll gasapvlaqa pklelpklev svnrveldal hmyevdatgt vaaplpkvwr
       61 iltgyermae fvpdmesckv lsrngneviv eqfgvarflf mtksihlivr ateqpmssid
      121 islisgdmkh yeshwelipv petggtkvvy sgklipnfyv pgilgakmir gdiermmsav
      181 larldrreda k
//
LOCUS       WP_235914516             203 aa            linear   BCT 02-MAR-2025
DEFINITION  antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein
            [Rugamonas rivuli].
ACCESSION   WP_235914516
VERSION     WP_235914516.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas rivuli
  ORGANISM  Rugamonas rivuli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
REFERENCE   1  (residues 1 to 203)
  AUTHORS   Zhang,S.P., Feng,H.Z., Wang,Q., Kempher,M.L., Quan,S.W., Tao,X.,
            Niu,S., Wang,Y., Feng,H.Y. and He,Y.X.
  TITLE     Bacterial type II toxin-antitoxin systems acting through
            post-translational modifications
  JOURNAL   Comput Struct Biotechnol J 19, 86-93 (2020)
   PUBMED   33384857
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 203)
  AUTHORS   Freire,D.M., Gutierrez,C., Garza-Garcia,A., Grabowska,A.D.,
            Sala,A.J., Ariyachaokun,K., Panikova,T., Beckham,K.S.H., Colom,A.,
            Pogenberg,V., Cianci,M., Tuukkanen,A., Boudehen,Y.M., Peixoto,A.,
            Botella,L., Svergun,D.I., Schnappinger,D., Schneider,T.R.,
            Genevaux,P., de Carvalho,L.P.S., Wilmanns,M., Parret,A.H.A. and
            Neyrolles,O.
  TITLE     An NAD+ Phosphorylase Toxin Triggers Mycobacterium tuberculosis
            Cell Death
  JOURNAL   Mol Cell 73 (6), 1282-1291 (2019)
   PUBMED   30792174
REFERENCE   3  (residues 1 to 203)
  AUTHORS   Piscotta,F.J., Jeffrey,P.D. and Link,A.J.
  TITLE     ParST is a widespread toxin-antitoxin module that targets
            nucleotide metabolism
  JOURNAL   Proc Natl Acad Sci U S A 116 (3), 826-834 (2019)
   PUBMED   30598453
REFERENCE   4  (residues 1 to 203)
  AUTHORS   Skjerning,R.B., Senissar,M., Winther,K.S., Gerdes,K. and
            Brodersen,D.E.
  TITLE     The RES domain toxins of RES-Xre toxin-antitoxin modules induce
            cell stasis by degrading NAD+
  JOURNAL   Mol Microbiol 111 (1), 221-236 (2019)
   PUBMED   30315706
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021255.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09722.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Rugamonas rivuli"
                     /db_xref="taxon:2743358"
     Protein         1..203
                     /product="antitoxin Xre/MbcA/ParS toxin-binding
                     domain-containing protein"
                     /calculated_mol_wt=22082
     Region          70..203
                     /region_name="COG5642"
                     /note="Uncharacterized conserved protein, DUF2384 family
                     [Function unknown]"
                     /db_xref="CDD:444366"
ORIGIN      
        1 msaaddpnep rrrksqltkr ptkgapsqit mfpakrhalw smttptmrgt gkaslgqlra
       61 lvtrvreapg iqlfdaveag vptdvvrlia nasgeptsvi mglagvsqtt fvrneaanrp
      121 lpdvaghrim gylrllatlr kmldesgdpe qtknfdleaw fahwvheklp elggkapaem
      181 lrnpegqrav eqvlermrgg laa
//
LOCUS       WP_235914570              73 aa            linear   BCT 02-MAR-2025
DEFINITION  HAD hydrolase-like protein [Rugamonas rivuli].
ACCESSION   WP_235914570
VERSION     WP_235914570.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas rivuli
  ORGANISM  Rugamonas rivuli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024639.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13242.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Rugamonas rivuli"
                     /db_xref="taxon:2743358"
     Protein         1..73
                     /product="HAD hydrolase-like protein"
                     /calculated_mol_wt=7674
     Region          <13..72
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
ORIGIN      
        1 massawtaaa rrrcagvare htllvgdeir dakvsaeagi dfgavawgfn tvdalmaqnp
       61 crmfraagdl leh
//
LOCUS       WP_235914586             715 aa            linear   BCT 02-MAR-2025
DEFINITION  HDOD domain-containing protein [Rugamonas rivuli].
ACCESSION   WP_235914586
VERSION     WP_235914586.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas rivuli
  ORGANISM  Rugamonas rivuli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020252.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08668.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Rugamonas rivuli"
                     /db_xref="taxon:2743358"
     Protein         1..715
                     /product="HDOD domain-containing protein"
                     /calculated_mol_wt=77817
     Region          14..240
                     /region_name="HDOD"
                     /note="HD-like signal output (HDOD) domain, no enzymatic
                     activity [Signal transduction mechanisms]; COG1639"
                     /db_xref="CDD:441246"
     Region          327..461
                     /region_name="GAF"
                     /note="GAF domain; pfam01590"
                     /db_xref="CDD:460259"
     Region          <465..698
                     /region_name="NtrB"
                     /note="Signal transduction histidine kinase NtrB, nitrogen
                     specific [Signal transduction mechanisms]; COG3852"
                     /db_xref="CDD:443061"
ORIGIN      
        1 mhqpdhdirn rlliarlpam pqiliklieh lqaddagmpe laaliakdaa mtskiltvan
       61 ssayhrnarv vgleqslvsl gtdmiktlvi sesvfqtfns fphssstdlr gfwkgsltta
      121 viardiakkm eyphveeayl agllhnvgrl allatapkey afnfmardde dlcaveqrtl
      181 qithseagaw lierwhldsf ladsvlyhhe pisrvesahp lirvvrlahl lcfhedqeqa
      241 iaeaghlcgl dgealelivk saarqveksa aylgidlaga ddipapsaya ppvvdpvqqr
      301 lseevrnmvl vsemgqtfar qqgeagllda mtrsarilfd fenaivllen ptghalhgta
      361 tgdqqqrlae fviplnkggv vaesagarkl sfvsrdsqal svaeeqlfri lgsegmvclp
      421 lvanqrclgv liggapawqm aglqkrerfl qsfgtqaaaa letaisergh tkrqiahvae
      481 eyreasrrvv hevnnplsii knylsvldgk lakrepvvge msilneeidr vgqlinglad
      541 lqptessrvt dvgrvvddvl rlfratdfvp asvqivvrmq eepaeidgda dllkqilvnl
      601 iknavealad ggkieisnrg hvnrerklyl elvvsdtgpg lsaevlanlf savrstkega
      661 hhglglsivh slvkkmqgli tcrsgktgtt feillpargs tsqvagvqtr vmdsv
//
LOCUS       WP_235914674             137 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: SDR family NAD(P)-dependent oxidoreductase, partial
            [Rhizobium].
ACCESSION   WP_235914674
VERSION     WP_235914674.1
KEYWORDS    RefSeq.
SOURCE      Rhizobium
  ORGANISM  Rhizobium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group.
REFERENCE   1  (residues 1 to 137)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 137)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Rhizobium"
                     /db_xref="taxon:379"
     Protein         <1..137
                     /product="SDR family NAD(P)-dependent oxidoreductase"
     Region          6..>133
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mtkkpialit gankglgkev arqlgglgtr vylgsrdger gqaaaddlak egadvmaial
       61 dvtdetsiva aarqiedreg lldvlvnnag vlyrvpalet daanifatyd vdvfgtvrti
      121 raflpllqrs phparal
//
LOCUS       WP_235914721              91 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1062 domain-containing protein [Brucella tritici].
ACCESSION   WP_235914721
VERSION     WP_235914721.1
KEYWORDS    RefSeq.
SOURCE      Brucella tritici (Ochrobactrum tritici)
  ORGANISM  Brucella tritici
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018099.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06353.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Brucella tritici"
                     /db_xref="taxon:94626"
     Protein         1..91
                     /product="DUF1062 domain-containing protein"
                     /calculated_mol_wt=10086
     Region          <8..79
                     /region_name="DUF1062"
                     /note="Protein of unknown function (DUF1062); cl01786"
                     /db_xref="CDD:470343"
ORIGIN      
        1 mhaaaffeti eielqvalpv ymrldrllat elkisrtrlq vlsdggtirm tsdendvvmr
       61 rriktggvis ikpepsdqei dwqslvagna c
//
LOCUS       WP_235914763             133 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Brucella tritici].
ACCESSION   WP_235914763
VERSION     WP_235914763.1
KEYWORDS    RefSeq.
SOURCE      Brucella tritici (Ochrobactrum tritici)
  ORGANISM  Brucella tritici
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 133)
  AUTHORS   Davies,D.R., Mahnke Braam,L., Reznikoff,W.S. and Rayment,I.
  TITLE     The three-dimensional structure of a Tn5 transposase-related
            protein determined to 2.9-A resolution
  JOURNAL   J Biol Chem 274 (17), 11904-11913 (1999)
   PUBMED   10207011
REFERENCE   2  (residues 1 to 133)
  AUTHORS   DasSarma,S.
  TITLE     Identification and analysis of the gas vesicle gene cluster on an
            unstable plasmid of Halobacterium halobium
  JOURNAL   Experientia 49 (6-7), 482-486 (1993)
   PUBMED   8335077
REFERENCE   3  (residues 1 to 133)
  AUTHORS   Ferrante,A.A. and Lessie,T.G.
  TITLE     Nucleotide sequence of IS402 from Pseudomonas cepacia
  JOURNAL   Gene 102 (1), 143-144 (1991)
   PUBMED   1650732
REFERENCE   4  (residues 1 to 133)
  AUTHORS   De Meirsman,C., Van Soom,C., Verreth,C., Van Gool,A. and
            Vanderleyden,J.
  TITLE     Nucleotide sequence analysis of IS427 and its target sites in
            Agrobacterium tumefaciens T37
  JOURNAL   Plasmid 24 (3), 227-234 (1990)
   PUBMED   1963949
REFERENCE   5  (residues 1 to 133)
  AUTHORS   Sato,S., Nakada,Y. and Shiratsuchi,A.
  TITLE     IS421, a new insertion sequence in Escherichia coli
  JOURNAL   FEBS Lett 249 (1), 21-26 (1989)
   PUBMED   2542093
REFERENCE   6  (residues 1 to 133)
  AUTHORS   Kroger,M. and Hobom,G.
  TITLE     Structural analysis of insertion sequence IS5
  JOURNAL   Nature 297 (5862), 159-162 (1982)
   PUBMED   6281654
REFERENCE   7  (residues 1 to 133)
  AUTHORS   Klaer,R., Kuhn,S., Tillmann,E., Fritz,H.J. and Starlinger,P.
  TITLE     The sequence of IS4
  JOURNAL   Mol Gen Genet 181 (2), 169-175 (1981)
   PUBMED   6268937
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01609.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Brucella tritici"
                     /db_xref="taxon:94626"
     Protein         1..>133
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <23..133
                     /region_name="transpos_IS5_3"
                     /note="IS5 family transposase; NF033580"
                     /db_xref="CDD:468097"
ORIGIN      
        1 mdrsghpydr qhhrkstslc gwrkrgadae aigrsrggrs tkihavvdgc grpvalritp
       61 gqrgdapiai plleplpptr lcaadtayds dalrdflatr gtqpvipnnp trkqirpfdp
      121 iayrrrniie rtf
//
LOCUS       WP_235914813             312 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Brucella tritici].
ACCESSION   WP_235914813
VERSION     WP_235914813.1
KEYWORDS    RefSeq.
SOURCE      Brucella tritici (Ochrobactrum tritici)
  ORGANISM  Brucella tritici
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024118.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12706.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Brucella tritici"
                     /db_xref="taxon:94626"
     Protein         1..312
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=35119
     Region          44..229
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(99,101,103..104,174..175,195,229)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 mtdrsvhevl rwqraspkna wptkidvqqi vpasrvdelt vtmighatvl iqiaglnllt
       61 dpvwsdrasp fhlvgpkrva vpgialtdlp pidvillshn hfdhfdvqtl rklkaghspl
      121 fvtplgndvl irrylpdari etgdwgdfvs igknteihiv panhwsgrsl hdrrmalwsg
      181 fmvrtagrli yfagdtgygt grifrnmrrq fgspdlailp cgaydprwfm atqhvdpeea
      241 iqimcdldad kvlgmhwgvf kltdeawndp airlskelea rknnstrfqp mlpgqvahis
      301 lcdarhqpek rd
//
LOCUS       WP_235914933              42 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GTP-binding protein, partial [Burkholderiales].
ACCESSION   WP_235914933
VERSION     WP_235914933.1
KEYWORDS    RefSeq.
SOURCE      Burkholderiales
  ORGANISM  Burkholderiales
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria.
REFERENCE   1  (residues 1 to 42)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..42
                     /organism="Burkholderiales"
                     /db_xref="taxon:80840"
     Protein         1..>42
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>42
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 makekfertk phvnvgtigh vdhgkttlta aittvlakkf gg
//
LOCUS       WP_235915036             180 aa            linear   BCT 02-MAR-2025
DEFINITION  phage integrase SAM-like domain-containing protein [Flagellimonas
            ochracea].
ACCESSION   WP_235915036
VERSION     WP_235915036.1
KEYWORDS    RefSeq.
SOURCE      Flagellimonas ochracea
  ORGANISM  Flagellimonas ochracea
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flagellimonas.
REFERENCE   1  (residues 1 to 180)
  AUTHORS   Ellrott,K., Jaroszewski,L., Li,W., Wooley,J.C. and Godzik,A.
  TITLE     Expansion of the protein repertoire in newly explored environments:
            human gut microbiome specific protein families
  JOURNAL   PLoS Comput Biol 6 (6), e1000798 (2010)
   PUBMED   20532204
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024502.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13102.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Flagellimonas ochracea"
                     /db_xref="taxon:2696472"
     Protein         1..180
                     /product="phage integrase SAM-like domain-containing
                     protein"
                     /calculated_mol_wt=21230
     Region          <3..61
                     /region_name="Phage_int_SAM_5"
                     /note="Phage integrase SAM-like domain; pfam13102"
                     /db_xref="CDD:463787"
     Region          75..>180
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
ORIGIN      
        1 mhdirvglid lmfvkrferh lndqkigqqn titkyvtnfk kivriahahg wierdpfyhw
       61 kavwspvqre vlseselksl rethmdaqrl eevrdvflfy cftglahsdv krlsendmti
      121 dikkkkwiri nrkkikvrcd ipllglaekv ilkykcrnsk rggtgllpvi snqktnlylk
//
LOCUS       WP_235915073             331 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3231 family protein [Priestia megaterium].
ACCESSION   WP_235915073
VERSION     WP_235915073.1
KEYWORDS    RefSeq.
SOURCE      Priestia megaterium (Bacillus megaterium)
  ORGANISM  Priestia megaterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022986.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11553.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Priestia megaterium"
                     /db_xref="taxon:1404"
     Protein         1..331
                     /product="DUF3231 family protein"
                     /calculated_mol_wt=38142
     Region          2..154
                     /region_name="DUF3231"
                     /note="Protein of unknown function (DUF3231); pfam11553"
                     /db_xref="CDD:402931"
     Region          169..326
                     /region_name="DUF3231"
                     /note="Protein of unknown function (DUF3231); pfam11553"
                     /db_xref="CDD:402931"
ORIGIN      
        1 mqkknqltsp eianlwahyi retlsvcvnk ymlhtiqdse ihnlfqealq yslnhidtlk
       61 alfkkekfpi pngftekdvn leapplftdv lclkslymms thghnemsls fttsirpdiv
      121 dfyyqcnlda meiykkskdl liskklyqqp ptyitsnkve miehyhyvtd vfgkqrpint
      181 iesghayfnl nktfiakami lgfsqvsknq nvralleksl qvknkhidvf sylltkdnlh
      241 lpkscetevt nsnispfsdr lmllqtgfff gvavtyynaa liasmradis ahcekaalds
      301 lwiysrigkd midnqwveqp pqaddrkrld d
//
LOCUS       WP_235915090             503 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: FAD-dependent monooxygenase [Priestia].
ACCESSION   WP_235915090
VERSION     WP_235915090.1
KEYWORDS    RefSeq.
SOURCE      Priestia
  ORGANISM  Priestia
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 503)
  AUTHORS   Schreuder,H.A., van der Laan,J.M., Swarte,M.B., Kalk,K.H., Hol,W.G.
            and Drenth,J.
  TITLE     Crystal structure of the reduced form of p-hydroxybenzoate
            hydroxylase refined at 2.3 A resolution
  JOURNAL   Proteins 14 (2), 178-190 (1992)
   PUBMED   1409567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01494.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Priestia"
                     /db_xref="taxon:2800373"
     Protein         1..503
                     /product="FAD-dependent monooxygenase"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /calculated_mol_wt=57595
     Region          5..492
                     /region_name="PRK06184"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:235728"
ORIGIN      
        1 mnpqilivga gptglvmayn larhnipfri idrsdgpgqa sramailprt lefyqqfgfa
       61 devidsgikm edvyvrvknk ikakvhlgsl geglspfpfv ltfpqddher flleklknfg
      121 ievewktell slaehgegvk tllkaqqeet ayfkyicgcd gahstvrkqm kiefkgekyk
      181 qhfyvmdvhg sgevmkdqki sisfsneefl icmpvrskgt yrmigiipsa frdqndvkae
      241 nihafiqrtf gvqieginwf styhihhrva srfrqgrifl sgdaahihsp aggqgmntgi
      301 gdainlswkl aavlqhkaal sildtyeeer lpfaellvnt tdrafkrmva rdktsqffrk
      361 hifppvlsfl frfpyprhka ftilsqirik yrnsdlssgq gtnvqsgdrl pyveenfesl
      421 qslnwqihvy gtaaeklkks mqekdfflhe fywnpylkka glqkdalyvi rpdgyigfis
      481 seqridllyq ylnthkilpf tne
//
LOCUS       WP_235915158             313 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: BadF/BadG/BcrA/BcrD ATPase family protein [Priestia].
ACCESSION   WP_235915158
VERSION     WP_235915158.1
KEYWORDS    RefSeq.
SOURCE      Priestia
  ORGANISM  Priestia
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 313)
  AUTHORS   Breese,K., Boll,M., Alt-Morbe,J., Schagger,H. and Fuchs,G.
  TITLE     Genes coding for the benzoyl-CoA pathway of anaerobic aromatic
            metabolism in the bacterium Thauera aromatica
  JOURNAL   Eur J Biochem 256 (1), 148-154 (1998)
   PUBMED   9746358
REFERENCE   2  (residues 1 to 313)
  AUTHORS   Egland,P.G., Pelletier,D.A., Dispensa,M., Gibson,J. and
            Harwood,C.S.
  TITLE     A cluster of bacterial genes for anaerobic benzene ring
            biodegradation
  JOURNAL   Proc Natl Acad Sci U S A 94 (12), 6484-6489 (1997)
   PUBMED   9177244
REFERENCE   3  (residues 1 to 313)
  AUTHORS   Bendrat,K., Muller,U., Klees,A.G. and Buckel,W.
  TITLE     Identification of the gene encoding the activator of
            (R)-2-hydroxyglutaryl-CoA dehydratase from Acidaminococcus
            fermentans by gene expression in Escherichia coli
  JOURNAL   FEBS Lett 329 (3), 329-331 (1993)
   PUBMED   8365476
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013986.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01869.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Priestia"
                     /db_xref="taxon:2800373"
     Protein         1..313
                     /product="BadF/BadG/BcrA/BcrD ATPase family protein"
                     /calculated_mol_wt=34131
     Region          20..307
                     /region_name="ASKHA_NBD_eukNAGK-like"
                     /note="nucleotide-binding domain (NBD) of the
                     eukaryotic-type N-acetylglucosamine kinase (NAGK) family;
                     cd24007"
                     /db_xref="CDD:466857"
ORIGIN      
        1 mncshgtnll fvsgdkmdyi igidgggtkt egvaysldgq elaasksgyg nllinyntai
       61 thidecitac ktalaghtck gislglagsk alskeeikry fynryqvevg lyddamiahe
      121 allhgkdgil tiagtgavsi grkdgvyeyg ggwghllgde gsgywiglqa lilltkehdq
      181 srpysslsqt ilqhvkadti hdikkfvyss pksevasltp lvvnqarnhk qeasdilqqa
      241 gknlanmtlh lykkqrfegs cllackgsil tevpevfdvy rkacekeikh iqwatqrvss
      301 akgayqlfmk kyk
//
LOCUS       WP_235915231             364 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Priestia megaterium].
ACCESSION   WP_235915231
VERSION     WP_235915231.1
KEYWORDS    RefSeq.
SOURCE      Priestia megaterium (Bacillus megaterium)
  ORGANISM  Priestia megaterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
REFERENCE   1  (residues 1 to 364)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 364)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 364)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 364)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Priestia megaterium"
                     /db_xref="taxon:1404"
     Protein         1..364
                     /product="ATP-binding protein"
                     /calculated_mol_wt=40978
     Region          <10..356
                     /region_name="KinA"
                     /note="Sporulation sensor histidine kinase A (Stage II
                     sporulation protein SpoIIF/SpoIIJ) [Cell cycle control,
                     cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG5805"
                     /db_xref="CDD:444507"
ORIGIN      
        1 mesqqelvvk ehelqtsnqh yqslfkhnpd gvfeisktge vllanpegea ivgysseelq
       61 kmkpsaliaa eefdmckeyf kevlngksak femnvinrkr errllrcsll piivhkqvvg
      121 vfmiarditt yrqdeelmit sekmsvigqm agavaheirn pltslkgfvq vmqasketnd
      181 tyldimmsei drinlissem lilgkkqhvs fektnlceil kqvitlmeaq anlnnvsill
      241 ketakrpiyv sadanqlkqv finvikngve aiiekghiti iveekdtral ihfedngigm
      301 sqerieqvgt pfystkeagt glglavcyki merhqgtmhf ksgkgkgttv tidmpiiern
      361 drls
//
LOCUS       WP_235915232              40 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphatase PAP2 family protein [Priestia megaterium].
ACCESSION   WP_235915232
VERSION     WP_235915232.1
KEYWORDS    RefSeq.
SOURCE      Priestia megaterium (Bacillus megaterium)
  ORGANISM  Priestia megaterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
REFERENCE   1  (residues 1 to 40)
  AUTHORS   Neuwald,A.F.
  TITLE     An unexpected structural relationship between integral membrane
            phosphatases and soluble haloperoxidases
  JOURNAL   Protein Sci 6 (8), 1764-1767 (1997)
   PUBMED   9260289
REFERENCE   2  (residues 1 to 40)
  AUTHORS   Stukey,J. and Carman,G.M.
  TITLE     Identification of a novel phosphatase sequence motif
  JOURNAL   Protein Sci 6 (2), 469-472 (1997)
   PUBMED   9041652
REFERENCE   3  (residues 1 to 40)
  AUTHORS   Messerschmidt,A. and Wever,R.
  TITLE     X-ray structure of a vanadium-containing enzyme: chloroperoxidase
            from the fungus Curvularia inaequalis
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 392-396 (1996)
   PUBMED   8552646
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013718.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01569.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..40
                     /organism="Priestia megaterium"
                     /db_xref="taxon:1404"
     Protein         1..40
                     /product="phosphatase PAP2 family protein"
                     /calculated_mol_wt=4607
     Region          <8..38
                     /region_name="PAP2_like"
                     /note="PAP2_like proteins, a super-family of histidine
                     phosphatases and vanadium haloperoxidases, includes type 2
                     phosphatidic acid phosphatase or lipid phosphate
                     phosphatase (LPP), Glucose-6-phosphatase,
                     Phosphatidylglycerophosphatase B and bacterial acid...;
                     cl00474"
                     /db_xref="CDD:469784"
ORIGIN      
        1 mtffiyqkrw gyiwimlalv vgvsriwvgv hspadviver
//
LOCUS       WP_235915262              82 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Priestia megaterium].
ACCESSION   WP_235915262
VERSION     WP_235915262.1
KEYWORDS    RefSeq.
SOURCE      Priestia megaterium (Bacillus megaterium)
  ORGANISM  Priestia megaterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Priestia megaterium"
                     /db_xref="taxon:1404"
     Protein         <1..>82
                     /product="Ig-like domain-containing protein"
     Region          <17..>81
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 kgafsvtipl qkagivvevt atdgsknisp atkvtvkdgt apvaptvnsi tdkttkvtgk
       61 tegnatvnvk atgkvigtgk ad
//
LOCUS       WP_235915101             213 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF1796 family putative cysteine peptidase
            [Priestia].
ACCESSION   WP_235915101
VERSION     WP_235915101.1
KEYWORDS    RefSeq.
SOURCE      Priestia
  ORGANISM  Priestia
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 213)
  AUTHORS   Iyer,L.M., Balaji,S., Koonin,E.V. and Aravind,L.
  TITLE     Evolutionary genomics of nucleo-cytoplasmic large DNA viruses
  JOURNAL   Virus Res 117 (1), 156-184 (2006)
   PUBMED   16494962
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020374.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08795.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Priestia"
                     /db_xref="taxon:2800373"
     Protein         1..213
                     /product="DUF1796 family putative cysteine peptidase"
                     /calculated_mol_wt=24732
     Region          15..166
                     /region_name="DUF1796"
                     /note="Putative papain-like cysteine peptidase (DUF1796);
                     pfam08795"
                     /db_xref="CDD:430221"
ORIGIN      
        1 mnmvtlnelk skqydmiysl gyncfpgiym kkyalrkqag vidwcisisl syvnqllkhr
       61 ckdlfvyehl tyvssfgdgs tlrlrdkvyq idsahdfpss intetnwlsy nevkekyerr
      121 terfltsmet sscilfirmg gtyeeakele nilkgmvknd fyillltnse kellseanwd
      181 lpctcvlhap ifsmdvlrdd tvweellsgl vik
//
LOCUS       WP_235915271             622 aa            linear   BCT 02-MAR-2025
DEFINITION  trypsin-like peptidase domain-containing protein [Puerhibacterium
            puerhi].
ACCESSION   WP_235915271
VERSION     WP_235915271.1
KEYWORDS    RefSeq.
SOURCE      Puerhibacterium puerhi
  ORGANISM  Puerhibacterium puerhi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Promicromonosporaceae; Puerhibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024758.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13365.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Puerhibacterium puerhi"
                     /db_xref="taxon:2692623"
     Protein         1..622
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /calculated_mol_wt=61719
     Region          <11..195
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          282..565
                     /region_name="DegQ"
                     /note="Periplasmic serine protease, S1-C subfamily,
                     contain C-terminal PDZ domain [Posttranslational
                     modification, protein turnover, chaperones]; COG0265"
                     /db_xref="CDD:440035"
ORIGIN      
        1 mstenndary gqgapqeqrp aapeprpqga gdpmrpeqpa psgaapasge rpvgqqpste
       61 hpterlavhd ttplprpvqq vpapqadtvq pgvqpgvqpg asqprygqya ppyaagapqg
      121 pqpgaqqpga qapqpyataq hgsqapsqqq ghqqgqppvg qpgwgsqqqp aphdpsnpyl
      181 hpdarpgagq tatrerrpra wvpvasaavi aallasggta alvtgldddg astsiasigq
      241 sdradaapvk dstaenpdwq avtaavapsv vaiqvtsqqg gsegsglild dqghvltnnh
      301 vvsgasngav qvtlsdgrlf eatvvgtdps tdlavvqikd apddlqpval gnsddvqvgd
      361 pvlavgnplg lantattgiv saldrpvsat gedgsdavvt naiqvdaavn pgnsggplfn
      421 aqgqvigits siatlssgtg gqsgsiglgf aipvnlakni ggqlidngsa qhaflgvtmt
      481 dgtatadgvt rrgaqvqdvt sgspaaaagv rsgdvivaid depvngaesl tafvrertag
      541 qestltvvrg gasekikvtf avreesssss dqggggqggd qggqqlpgqp gsgdggssgg
      601 sgsdgssgsg dslwewlfgg ns
//
LOCUS       WP_235915273             412 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Puerhibacterium puerhi].
ACCESSION   WP_235915273
VERSION     WP_235915273.1
KEYWORDS    RefSeq.
SOURCE      Puerhibacterium puerhi
  ORGANISM  Puerhibacterium puerhi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Promicromonosporaceae; Puerhibacterium.
REFERENCE   1  (residues 1 to 412)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Puerhibacterium puerhi"
                     /db_xref="taxon:2692623"
     Protein         1..412
                     /product="AMP-binding protein"
                     /calculated_mol_wt=40341
     Region          3..404
                     /region_name="PRK07824"
                     /note="o-succinylbenzoate--CoA ligase"
                     /db_xref="CDD:236108"
ORIGIN      
        1 mspavlpapi aslttavraa ldggpavhgl prlsdaalpd gtalvvrtsg stgtpreval
       61 taaalrasat atherlggpg rwvltlppth vaglqvvvrs vlaadagvpa altaaepgqh
      121 ftpegfadll epaladgvpv haslvptqlh rlvaaadags arglealarc advllggaat
      181 papllarara agvrvvrtyg msetaggcvy dgvplrgvqv rlaagdvvel agptlaagyv
      241 gdaaataaaf rtdpagpdla gpdagtrwfr tsdlgalgpd gtlsvlgrad dvvvtggvnv
      301 apaavegvla evlpgalgaa aaepcvvgvp dpewgsavva vvavgpagap aagplravda
      361 dalarvraav adrlggpsap rrvyltdalp lrgpgkvdrs gvaaavrehe sr
//
LOCUS       WP_235915278             435 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Puerhibacterium puerhi].
ACCESSION   WP_235915278
VERSION     WP_235915278.1
KEYWORDS    RefSeq.
SOURCE      Puerhibacterium puerhi
  ORGANISM  Puerhibacterium puerhi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Promicromonosporaceae; Puerhibacterium.
REFERENCE   1  (residues 1 to 435)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Puerhibacterium puerhi"
                     /db_xref="taxon:2692623"
     Protein         1..435
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=46903
     Region          <25..435
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          82..>170
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 msssvtsevs ytlpgvhvtd rtvqvpldwa rpddgrtisv farecvaphr rhedlpllvf
       61 lqggpggkgp rpvgpdgwlg talerfrvvl ldqrgtgrss avragalqrl gdaaaqaehl
      121 shfradsivr daehlrttvy ggrrwstlgq syggfitlty lslapeglaa syvtgglagl
      181 tasatdvyar tqprvaakna vyreryphdv ptiarvadrl aagdvvlpng dpltverfqs
      241 lgmafgmapg fervhwivde afdagsdelt dtflaevqaa tsfatnplya vmhesiyaqs
      301 gtgatawaaq rvrdadpafa psarpllltg emiypwmfeq aelrgfraaa ealaaredwg
      361 dlydvdrlaa nevpveaavy fddmyvdagl sldtaarvgn vrawvtnehe hdglrlgnvl
      421 arllermdar ggapa
//
LOCUS       WP_235915285             334 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Puerhibacterium
            puerhi].
ACCESSION   WP_235915285
VERSION     WP_235915285.1
KEYWORDS    RefSeq.
SOURCE      Puerhibacterium puerhi
  ORGANISM  Puerhibacterium puerhi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Promicromonosporaceae; Puerhibacterium.
REFERENCE   1  (residues 1 to 334)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Puerhibacterium puerhi"
                     /db_xref="taxon:2692623"
     Protein         1..334
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=35986
     Region          7..257
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(13,15..16,18,37..39,68..70,103..105,131,135,
                     158..161)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(82,105,131,135)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mttrspksil fvggsgvish asvaravalg hrvtllnrgr ssqrplpddv etlvadatdh
       61 davdaalagr efdvvaqfra ftpdhvsrdv lrfagrtgqy vfissasayq tpparvpvte
      121 stplanpfwq ysrdkiacee vlvrasreng fpmtivrpsh tydrtliptt ggwtdvarlr
      181 agrpvvvhgd gttqwtltht edfavgfvgl lgnplavgds fhitgshapt wdqvyrwlaa
      241 aagvdepelv hvasetiakv lpdvgpgllg dkahsmtfdt sklaalvpef rttitydeaa
      301 veqvawydah peaqqvdaal dagfdklveh arsl
//
LOCUS       WP_235915292             188 aa            linear   BCT 02-MAR-2025
DEFINITION  type II secretion system F family protein [Puerhibacterium puerhi].
ACCESSION   WP_235915292
VERSION     WP_235915292.1
KEYWORDS    RefSeq.
SOURCE      Puerhibacterium puerhi
  ORGANISM  Puerhibacterium puerhi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Promicromonosporaceae; Puerhibacterium.
REFERENCE   1  (residues 1 to 188)
  AUTHORS   Desvaux,M., Hebraud,M., Talon,R. and Henderson,I.R.
  TITLE     Secretion and subcellular localizations of bacterial proteins: a
            semantic awareness issue
  JOURNAL   Trends Microbiol 17 (4), 139-145 (2009)
   PUBMED   19299134
REFERENCE   2  (residues 1 to 188)
  AUTHORS   Desvaux,M., Parham,N.J., Scott-Tucker,A. and Henderson,I.R.
  TITLE     The general secretory pathway: a general misnomer?
  JOURNAL   Trends Microbiol 12 (7), 306-309 (2004)
   PUBMED   15223057
REFERENCE   3  (residues 1 to 188)
  AUTHORS   Peabody,C.R., Chung,Y.J., Yen,M.R., Vidal-Ingigliardi,D.,
            Pugsley,A.P. and Saier,M.H.
  TITLE     Type II protein secretion and its relationship to bacterial type IV
            pili and archaeal flagella
  JOURNAL   Microbiology (Reading) 149 (Pt 11), 3051-3072 (2003)
   PUBMED   14600218
REFERENCE   4  (residues 1 to 188)
  AUTHORS   Py,B., Loiseau,L. and Barras,F.
  TITLE     An inner membrane platform in the type II secretion machinery of
            Gram-negative bacteria
  JOURNAL   EMBO Rep 2 (3), 244-248 (2001)
   PUBMED   11266368
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012694.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00482.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Puerhibacterium puerhi"
                     /db_xref="taxon:2692623"
     Protein         1..188
                     /product="type II secretion system F family protein"
                     /calculated_mol_wt=19205
     Region          <51..181
                     /region_name="TadC"
                     /note="Flp pilus assembly protein TadC [Extracellular
                     structures]; COG2064"
                     /db_xref="CDD:441667"
ORIGIN      
        1 mtaagavvgl lvlaacapwa aaeraahrrs ralaaevrap veprgprvdv pvvlellgaa
       61 lragagvpra lqtvggavgd ddgrslgrva dalrlgapwd aawrdaperl gtvhralrpa
      121 wvdgaapges lraageelrr errnaartaa arlgvrlvlp lgacylpafv lvglapvlla
      181 lgidllsg
//
LOCUS       WP_235915296             187 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Puerhibacterium puerhi].
ACCESSION   WP_235915296
VERSION     WP_235915296.1
KEYWORDS    RefSeq.
SOURCE      Puerhibacterium puerhi
  ORGANISM  Puerhibacterium puerhi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Promicromonosporaceae; Puerhibacterium.
REFERENCE   1  (residues 1 to 187)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Puerhibacterium puerhi"
                     /db_xref="taxon:2692623"
     Protein         1..187
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=19350
     Region          1..184
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mlagepdlev vgeapdgaaa vaqarelapd vvlmdlrmpg ldgvgataal lresagrtrv
       61 vvlttydtda dilraveaga tgyllkdtpr dqlvagvraa argetvlapt vatrlvtsvr
      121 tagerptare aevlglvarg lsnaaigrel yiseatvkth llrafaklgv ddrtaavtva
      181 rergwla
//
LOCUS       WP_235915341             135 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1232 domain-containing protein [Puerhibacterium puerhi].
ACCESSION   WP_235915341
VERSION     WP_235915341.1
KEYWORDS    RefSeq.
SOURCE      Puerhibacterium puerhi
  ORGANISM  Puerhibacterium puerhi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Promicromonosporaceae; Puerhibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018508.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06803.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Puerhibacterium puerhi"
                     /db_xref="taxon:2692623"
     Protein         1..135
                     /product="DUF1232 domain-containing protein"
                     /calculated_mol_wt=14718
ORIGIN      
        1 mpgwawtlvg avgglvllwl llvaalwatr pdelrlrell rllpdvlrlv rrlaadrtlp
       61 rgvrvrlwll lgylalpvdl vpdvvpvlgy addalvvalv lrsvvrragp davarhwpgt
      121 pdglaalrrv arlpa
//
LOCUS       WP_235915398             623 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase family protein [Puerhibacterium puerhi].
ACCESSION   WP_235915398
VERSION     WP_235915398.1
KEYWORDS    RefSeq.
SOURCE      Puerhibacterium puerhi
  ORGANISM  Puerhibacterium puerhi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Promicromonosporaceae; Puerhibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024914.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13524.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Puerhibacterium puerhi"
                     /db_xref="taxon:2692623"
     Protein         1..623
                     /product="glycosyltransferase family protein"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=69306
     Region          68..382
                     /region_name="COG4641"
                     /note="Spore maturation protein CgeB [Cell cycle control,
                     cell division, chromosome partitioning]"
                     /db_xref="CDD:443679"
     Region          395..579
                     /region_name="WcaA"
                     /note="Glycosyltransferase involved in cell wall
                     bisynthesis [Cell wall/membrane/envelope biogenesis];
                     COG0463"
                     /db_xref="CDD:440231"
ORIGIN      
        1 mtsklraart alwhlrtggl sqlrthlrrr rilgpqrtph rtadgapvye pwpvperepa
       61 rplrvgvild efsrlafgye wqqvllkpsa wpeqlegldl vfvesawkgn ggawqyhltg
      121 ptaprpalve mlaacrdrgv ptafwnkedp ahfedfldta rlfdrvyttd ttvvpayrer
      181 lghdrvgvlp fgaqpaihsp vrahghersg dvafagtwfa hkyperraqm elllgaamdv
      241 sprmehglei fsrfagqgdq yefpepfasr vvgslgydrm laayrdykvf lnvnsvvdsp
      301 smcarrifei tacgtpvvtt psaatgeffp pdevfsvatr eeaastiral vrspelrdra
      361 vhrgqrriwr ehtygaraqr vlhdvglaaa pqvprpsvta lvstnrphrl ddvlrtvgaq
      421 rdvavqlall thgfeddead lrvrakeagv edlvllrada gvplgaclnr lvdaaggdvv
      481 akmddddvyg plylsdqlda maysgapvvg kqahymyles ldatllrfad rehrftdrvm
      541 gptivarrdv arevrftelp agedtgflaa aveagvrvys adrfnfvqvr tgqrqhtwsv
      601 tdaellasge vqfygradeh vvf
//
LOCUS       WP_235915412             143 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6113 family protein [Puerhibacterium puerhi].
ACCESSION   WP_235915412
VERSION     WP_235915412.1
KEYWORDS    RefSeq.
SOURCE      Puerhibacterium puerhi
  ORGANISM  Puerhibacterium puerhi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Promicromonosporaceae; Puerhibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040328.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19608.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Puerhibacterium puerhi"
                     /db_xref="taxon:2692623"
     Protein         1..143
                     /product="DUF6113 family protein"
                     /calculated_mol_wt=14445
ORIGIN      
        1 msgeqhpgtr hdepapgsrg prtagdllgv lvrtllavvl gavlgalgtv thlttwlglp
       61 aglvlalalt astavltraw agygtllaga vgwlvavqal svqgpggdvl vpatvpglvw
      121 tygglvvwgv aaflprrwfa arr
//
LOCUS       WP_235915469             460 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase [Puerhibacterium puerhi].
ACCESSION   WP_235915469
VERSION     WP_235915469.1
KEYWORDS    RefSeq.
SOURCE      Puerhibacterium puerhi
  ORGANISM  Puerhibacterium puerhi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Promicromonosporaceae; Puerhibacterium.
REFERENCE   1  (residues 1 to 460)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 460)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Puerhibacterium puerhi"
                     /db_xref="taxon:2692623"
     Protein         1..460
                     /product="phosphotransferase"
                     /calculated_mol_wt=46824
     Region          <11..460
                     /region_name="Ble"
                     /note="Predicted trehalose synthase [Carbohydrate
                     transport and metabolism]; COG3281"
                     /db_xref="CDD:442512"
ORIGIN      
        1 mtadvrvhra gtylppavtd lvarwapgrr wfpggaagtl spwrevtvdg addvvlallr
       61 lrddgggdda vvvhvplvlt pagetstlld apgsigtvtt psgpvtvhdg gvhpacwaal
      121 lraagvadda aaaaalaagg raitgeqsnt svvlpravlp gadagamlkv lrtvaagahp
      181 dvvvpqalta vgyagvprfl galevplevp vdrprdgsvp atahlavlae lvrdardgfe
      241 lacelagrge sfaplaadlg tvlaglhaam rralpaggal dprtfvaglr rradaavaaa
      301 pslagraadv aavlddlerr ltpvplqpih gdlhlgqalh gadgwklldf egepqrpvae
      361 rtapdlplrd vagilrsvdy aaavggaaep awaadaeaaf laayrasaga pvgmddataa
      421 aalralvldk alyevvyetr qrpdwvripl aavdralsas
//
LOCUS       WP_235915478             252 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-binding dehydrogenase [Puerhibacterium puerhi].
ACCESSION   WP_235915478
VERSION     WP_235915478.1
KEYWORDS    RefSeq.
SOURCE      Puerhibacterium puerhi
  ORGANISM  Puerhibacterium puerhi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Promicromonosporaceae; Puerhibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00107.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Puerhibacterium puerhi"
                     /db_xref="taxon:2692623"
     Protein         1..252
                     /product="zinc-binding dehydrogenase"
                     /calculated_mol_wt=26738
     Region          <1..245
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
     Site            order(27,31,51..56,75..76,80,94,118..119,152..153,
                     189..191)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176178"
ORIGIN      
        1 mpwgdfnclr lgedaeekqt dyvmladifp tgyhatemag vkpgdqtviy gagpvglmaa
       61 lsatirgagk vmvvdrqpdr lrlaesigai aiddskvdpv qvvldetmgl gadngcecvg
      121 yqahepdgqe qasltmnrlv asvrftgsig avgvyvpqdp ggsddlakqg kialdfgmlw
      181 fkglhlgtgq apvkkynrql rdliaggkae psfivshelp leqapeaydh fdkrddgwtk
      241 vvlhpamaga ga
//
LOCUS       WP_235915491             871 aa            linear   BCT 02-MAR-2025
DEFINITION  immune inhibitor A domain-containing protein [Puerhibacterium
            puerhi].
ACCESSION   WP_235915491
VERSION     WP_235915491.1
KEYWORDS    RefSeq.
SOURCE      Puerhibacterium puerhi
  ORGANISM  Puerhibacterium puerhi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Promicromonosporaceae; Puerhibacterium.
REFERENCE   1  (residues 1 to 871)
  AUTHORS   Arolas,J.L., Goulas,T., Pomerantsev,A.P., Leppla,S.H. and
            Gomis-Ruth,F.X.
  TITLE     Structural Basis for Latency and Function of Immune Inhibitor A
            Metallopeptidase, a Modulator of the Bacillus anthracis Secretome
  JOURNAL   Structure 24 (1), 25-36 (2016)
   PUBMED   26745529
REFERENCE   2  (residues 1 to 871)
  AUTHORS   Fedhila,S., Nel,P. and Lereclus,D.
  TITLE     The InhA2 metalloprotease of Bacillus thuringiensis strain 407 is
            required for pathogenicity in insects infected via the oral route
  JOURNAL   J Bacteriol 184 (12), 3296-3304 (2002)
   PUBMED   12029046
REFERENCE   3  (residues 1 to 871)
  AUTHORS   Grandvalet,C., Gominet,M. and Lereclus,D.
  TITLE     Identification of genes involved in the activation of the Bacillus
            thuringiensis inhA metalloprotease gene at the onset of sporulation
  JOURNAL   Microbiology (Reading) 147 (Pt 7), 1805-1813 (2001)
   PUBMED   11429458
REFERENCE   4  (residues 1 to 871)
  AUTHORS   Charlton,S., Moir,A.J., Baillie,L. and Moir,A.
  TITLE     Characterization of the exosporium of Bacillus cereus
  JOURNAL   J Appl Microbiol 87 (2), 241-245 (1999)
   PUBMED   10475957
REFERENCE   5  (residues 1 to 871)
  AUTHORS   Ogierman,M.A., Fallarino,A., Riess,T., Williams,S.G., Attridge,S.R.
            and Manning,P.A.
  TITLE     Characterization of the Vibrio cholerae El Tor lipase operon lipAB
            and a protease gene downstream of the hly region
  JOURNAL   J Bacteriol 179 (22), 7072-7080 (1997)
   PUBMED   9371455
REFERENCE   6  (residues 1 to 871)
  AUTHORS   Lovgren,A., Zhang,M., Engstrom,A., Dalhammar,G. and Landen,R.
  TITLE     Molecular characterization of immune inhibitor A, a secreted
            virulence protease from Bacillus thuringiensis
  JOURNAL   Mol Microbiol 4 (12), 2137-2146 (1990)
   PUBMED   2089225
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017368.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05547.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Puerhibacterium puerhi"
                     /db_xref="taxon:2692623"
     Protein         1..871
                     /product="immune inhibitor A domain-containing protein"
                     /GO_function="GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=93464
     Region          170..724
                     /region_name="COG4412"
                     /note="Bacillopeptidase F, M6 metalloprotease family
                     [Posttranslational modification, protein turnover,
                     chaperones]"
                     /db_xref="CDD:443532"
     Region          777..818
                     /region_name="ChiC_BD"
                     /note="Chitin-binding domain of chitinase C; cd12215"
                     /db_xref="CDD:213178"
     Region          829..868
                     /region_name="ChiC_BD"
                     /note="Chitin-binding domain of chitinase C; cd12215"
                     /db_xref="CDD:213178"
ORIGIN      
        1 mtsalgvtaa liaaaavapv tavaapapdd tpaqtsehak eddrpdalre kqvamkqeaa
       61 savatgkaev qtrgsgraks kvvevspdky veygvqetaq lltflvefgd eadprfpdap
      121 asgpvhneip epaaddnsty wepdfsrehy eemfftgled qggesfagvy demssgrfdl
      181 qgdvsdwvtv pyseasygqt esqadmtrfi qdsadawyad qlaqgktkde vvdylrsfdv
      241 wdrydldgdg iinepdgyid hfqaihageg eeagapewai wahrwavnqg glgvdgpady
      301 akaggiqigd tdiwirdytt epengglgvf ahefghdlgl pdyydtqggd ngtgfwnlms
      361 sgswlghgdg tigttpnhmg ateklflgwl dhetvdvged atvdlgpsfh attlgtqavv
      421 vnlppgvekv evadphdgky lysgtgnnls tsvaspvftv padadltakv ryeieadydy
      481 ayveistdgg stwtalqtnr satgegngnt gggitgssgd awvdltadls ayagqdasvr
      541 fryasdggvn elgflvddva vgdalaedve dgaadwvnng fvvvtdgtyd qeyehyyvae
      601 nrvyggydat lktgpynfgw svsapdrveh ypyqdgllvw yanslygdnn tsqhpgagqa
      661 lpvdaradal twsdgslarg rvqsfdatfg tqktdpvslh retadgtttl kvgkqaavpv
      721 fddsdpnayy dpanpqgsvi vagtgttiev tkqntrkgtm tvevsvpdae eppasapawd
      781 attvydfgdv vsydgstwla swwtrgqepg npygpwqelt pvdengvsew apsriytgge
      841 kvthqgttyq aqwwtrnqap gdehgpwkvv d
//
LOCUS       WP_235915520             338 aa            linear   BCT 02-MAR-2025
DEFINITION  zeta toxin family protein [Puerhibacterium puerhi].
ACCESSION   WP_235915520
VERSION     WP_235915520.1
KEYWORDS    RefSeq.
SOURCE      Puerhibacterium puerhi
  ORGANISM  Puerhibacterium puerhi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Promicromonosporaceae; Puerhibacterium.
REFERENCE   1  (residues 1 to 338)
  AUTHORS   Meinhart,A., Alonso,J.C., Strater,N. and Saenger,W.
  TITLE     Crystal structure of the plasmid maintenance system epsilon/zeta:
            functional mechanism of toxin zeta and inactivation by epsilon 2
            zeta 2 complex formation
  JOURNAL   Proc Natl Acad Sci U S A 100 (4), 1661-1666 (2003)
   PUBMED   12571357
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018154.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06414.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Puerhibacterium puerhi"
                     /db_xref="taxon:2692623"
     Protein         1..338
                     /product="zeta toxin family protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /calculated_mol_wt=37223
     Region          35..>96
                     /region_name="ExeA"
                     /note="Type II secretory pathway ATPase component
                     GspA/ExeA/MshM [Intracellular trafficking, secretion, and
                     vesicular transport, Extracellular structures]; COG3267"
                     /db_xref="CDD:442498"
     Region          77..272
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 mteesmtptd ahretvrays rpggpldpag pnattanprw ffghdvrrrt rerralhrrl
       61 ldearaehpa araerraivl agppgagkst vlrdvlgvda sawvtidade fkhkllreal
      121 adgsyedflk paavaereaa gepfyplela slvheessfl akqmrheama eglnvvidsv
      181 lsspdkaval gqhlaaagyr vevidvevpy elseqriaqr wresyenava tgeglggrwv
      241 psayarevfd aqtgrarsqe salrlaqecg avtryrrfwt psndatrive vdraraveng
      301 plidiaavda lrtartgrpd rvrparrpgq eadgaher
//
LOCUS       WP_235915361             144 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6098 family protein [Puerhibacterium puerhi].
ACCESSION   WP_235915361
VERSION     WP_235915361.1
KEYWORDS    RefSeq.
SOURCE      Puerhibacterium puerhi
  ORGANISM  Puerhibacterium puerhi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Promicromonosporaceae; Puerhibacterium.
REFERENCE   1  (residues 1 to 144)
  AUTHORS   Nunez,L.E., Mendez,C., Brana,A.F., Blanco,G. and Salas,J.A.
  TITLE     The biosynthetic gene cluster for the beta-lactam carbapenem
            thienamycin in Streptomyces cattleya
  JOURNAL   Chem Biol 10 (4), 301-311 (2003)
   PUBMED   12725858
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039995.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19593.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Puerhibacterium puerhi"
                     /db_xref="taxon:2692623"
     Protein         1..144
                     /product="DUF6098 family protein"
                     /calculated_mol_wt=15915
     Region          7..136
                     /region_name="DUF6098"
                     /note="Family of unknown function (DUF6098); pfam19593"
                     /db_xref="CDD:437425"
ORIGIN      
        1 msrrptgpdd lpevqsleel aelarsrtpl yvrfstgpkv daagrsrdhe sgcmlpglsa
       61 npldpepwfd rpavhwvarq vmqyahlrqd erfawvltge vvgrgpdcep ligdvqpvaa
      121 ipdhvvraar dlyeevfdvs edgt
//
LOCUS       WP_235915365             166 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6328 family protein [Puerhibacterium puerhi].
ACCESSION   WP_235915365
VERSION     WP_235915365.1
KEYWORDS    RefSeq.
SOURCE      Puerhibacterium puerhi
  ORGANISM  Puerhibacterium puerhi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Promicromonosporaceae; Puerhibacterium.
REFERENCE   1  (residues 1 to 166)
  AUTHORS   Ramos,A., Lombo,F., Brana,A.F., Rohr,J., Mendez,C. and Salas,J.A.
  TITLE     Biosynthesis of elloramycin in Streptomyces olivaceus requires
            glycosylation by enzymes encoded outside the aglycon cluster
  JOURNAL   Microbiology (Reading) 154 (Pt 3), 781-788 (2008)
   PUBMED   18310024
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039409.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19853.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Puerhibacterium puerhi"
                     /db_xref="taxon:2692623"
     Protein         1..166
                     /product="DUF6328 family protein"
                     /calculated_mol_wt=17879
     Region          20..137
                     /region_name="DUF6328"
                     /note="Family of unknown function (DUF6328); pfam19853"
                     /db_xref="CDD:466208"
ORIGIN      
        1 mtdeqvagar pgedaakrpe tpaqrsdrnw nellqelrvm qtgvqiltgf lltlpfqqrf
       61 seldgyqvrl ylvlvilaaa ttglavapvs mhralfrkhl krelvtaadr mtraalvlla
      121 lvvtgttslv fdvvvgrgag lvvgaaalvv lavlwlavps vvrrrg
//
LOCUS       WP_235915545             406 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Puerhibacterium puerhi].
ACCESSION   WP_235915545
VERSION     WP_235915545.1
KEYWORDS    RefSeq.
SOURCE      Puerhibacterium puerhi
  ORGANISM  Puerhibacterium puerhi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Promicromonosporaceae; Puerhibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Puerhibacterium puerhi"
                     /db_xref="taxon:2692623"
     Protein         1..406
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=43652
     Region          13..381
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 msaaprtphp pwgllvcsle pwdsvwrrnq hlvsrlladp glrvvfvepp vdplhalhrg
       61 avprlgrglr rlpyeehefp gadrlwlyep tkwvprkmad ggdrrraraa lraarsigap
      121 pavlwvndis yaalldvtsv pvvydvtddw laahrppaet arlveaearl lreaaavtvc
      181 spalqrakgr dravelvtng vdvaayrdpg prpadlpagp valyvgtlha drldvalcvr
      241 taaalaavrg rlvllgpdal eederrrltt agvvllgarp fdtvpayvth advlvvphvv
      301 daftdsldpl klyeyraagr pvvatpvagf rdtadpavra lpatyfpaav vaatraeapr
      361 reppadlptw eqqaalmaav lgdaagrpap psappsaqpr haptrs
//
LOCUS       WP_235915574             208 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Puerhibacterium puerhi].
ACCESSION   WP_235915574
VERSION     WP_235915574.1
KEYWORDS    RefSeq.
SOURCE      Puerhibacterium puerhi
  ORGANISM  Puerhibacterium puerhi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Promicromonosporaceae; Puerhibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Puerhibacterium puerhi"
                     /db_xref="taxon:2692623"
     Protein         1..208
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=22205
     Region          9..173
                     /region_name="NUDIX_ADPRase_Rv1700"
                     /note="ADP-ribose pyrophosphatase from Mycobacterium
                     tuberculosis (Mt-ADPRase), and similar proteins; cd24158"
                     /db_xref="CDD:467606"
ORIGIN      
        1 madvvaprpv vahervaagr ifdlvrdvvd lgdgeqvtre yldhpgavav valddagrvl
       61 llrqyrhpvr selwevpagl ldvageaaqa aaarelheea dlvadrwdvl vdfatspgat
      121 nealrvflar glrpvaeaer htrteeeagi evrwvpldea vgrvlsgdlh npsavvgvla
      181 ahaaaaggwa slrpadapwp yrrgtlpp
//
LOCUS       WP_235915595             198 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5998 family protein [Puerhibacterium puerhi].
ACCESSION   WP_235915595
VERSION     WP_235915595.1
KEYWORDS    RefSeq.
SOURCE      Puerhibacterium puerhi
  ORGANISM  Puerhibacterium puerhi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Promicromonosporaceae; Puerhibacterium.
REFERENCE   1  (residues 1 to 198)
  AUTHORS   Lim,Y.H., Wong,F.T., Yeo,W.L., Ching,K.C., Lim,Y.W., Heng,E.,
            Chen,S., Tsai,D.J., Lauderdale,T.L., Shia,K.S., Ho,Y.S., Hoon,S.,
            Ang,E.L., Zhang,M.M. and Zhao,H.
  TITLE     Auroramycin: A Potent Antibiotic from Streptomyces roseosporus by
            CRISPR-Cas9 Activation
  JOURNAL   Chembiochem (2018) In press
   PUBMED   29799651
  REMARK    Publication Status: Available-Online prior to print
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040294.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19461.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Puerhibacterium puerhi"
                     /db_xref="taxon:2692623"
     Protein         1..198
                     /product="DUF5998 family protein"
                     /calculated_mol_wt=20717
     Region          15..194
                     /region_name="DUF5998"
                     /note="Family of unknown function (DUF5998); pfam19461"
                     /db_xref="CDD:437293"
ORIGIN      
        1 mphaepytgp ltadlhadiv ragyypqlve dvldvalage evvahlvqae ttfdqevrrh
       61 ltvlvltpsr lvaahvddhe gdkdapasaa atteavplae irsvtlthvv arpaeytsgg
      121 esaseinlvv gwgavsrlel epascgdpgc dadhgltgqm lpddvvvrvs staegrpavr
      181 ravefartls aatsgrar
//
LOCUS       WP_235915596             942 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Puerhibacterium puerhi].
ACCESSION   WP_235915596
VERSION     WP_235915596.1
KEYWORDS    RefSeq.
SOURCE      Puerhibacterium puerhi
  ORGANISM  Puerhibacterium puerhi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Promicromonosporaceae; Puerhibacterium.
REFERENCE   1  (residues 1 to 942)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 942)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Puerhibacterium puerhi"
                     /db_xref="taxon:2692623"
     Protein         1..942
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=98337
     Region          24..198
                     /region_name="MnaT"
                     /note="L-amino acid N-acyltransferase MnaT [Amino acid
                     transport and metabolism]; COG1247"
                     /db_xref="CDD:440860"
     Region          245..341
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Region          306..935
                     /region_name="PatZN"
                     /note="Acyl-CoA synthetase (NDP forming) [Energy
                     production and conversion]; COG1042"
                     /db_xref="CDD:440664"
ORIGIN      
        1 mvadgttayp vgweadvvlr dgstthvrpi rpedadalqr fqqgqsersa ylrffapvtr
       61 ltdrelrlft hvdhveraal vavrpagaat teagaattea gaaadtsgaa adtpgadaaa
      121 ggagevedii gvarydvvep glaevafnia dsvqgkglgs vllehlaaaa rergvrrfta
      181 dvlpqnasml avfraagydv hqelddgvvt vsvdldpter srevmadreh raearsmqgl
      241 laarrvllvg pgtdaaptsv dalmarrvvd aaladpgdte lsvlnvpgpv eaapgvtplt
      301 swaqvgevdl avlavppqqa vevvrrlagh gargvvvlsa gyaetgqrgl drqralvrta
      361 hahgmrvvgp asyglltttp garlhaslat rppapgvvgl fcqsapaavt lsatlerrgl
      421 gvsslvsagh radvsgndlm qywlqdpatq vvclylesig nprkfsriar rlaaekpvva
      481 vvagrsgqvv ppghavratr aprrmldell rqagviraen ahqlmdvaqv vahqplpagr
      541 rvgilassaa laalvaeaaa andlvvatss dflapdmsde dvertvealy apgacdvvva
      601 vdvpvvmprs gtvaravara aartgrptva smlglhgmpe elaatapdgr rvqvpafstp
      661 edavtalakv vqhaawrgrd hgtaarpagv qqararrlve atlrqaaaag daevrldeda
      721 aaellacygl tlqrsrrvrt aaeavaaade lgwpvalkaa aptlrhradl ggvrldleda
      781 eelgeaverm ravatalapd repvlevqam vptgvacvvr stedplfgpv vsfglsgdat
      841 ellddvaygi apltdvdvre lvrsvraapr lfgyqeappa dvpaledvva rvavmaddlp
      901 elarlelypv vvaqqgasvl hasvrlrpae qradglrral pa
//
LOCUS       WP_235915620             318 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Puerhibacterium puerhi].
ACCESSION   WP_235915620
VERSION     WP_235915620.1
KEYWORDS    RefSeq.
SOURCE      Puerhibacterium puerhi
  ORGANISM  Puerhibacterium puerhi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Promicromonosporaceae; Puerhibacterium.
REFERENCE   1  (residues 1 to 318)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 318)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Puerhibacterium puerhi"
                     /db_xref="taxon:2692623"
     Protein         1..318
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=33711
     Region          16..318
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(170..171,244,246,264,299)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:271179"
     Site            order(170,264,267,290,299)
                     /site_type="active"
                     /db_xref="CDD:271179"
ORIGIN      
        1 maatdptpdl pplppamgea varfaqhlds qrghsahtrr ayvadvtgll ryavrhgaqg
       61 mddlqlpvlr awlasqadrg larstlarrg aaaraflrwa hraglvahdp sarlaspkvp
      121 rvlptvltgd aaarmldtar ddaaaaesda rpaamrawaa aellygsgir vgelvtvdvd
      181 dvdpaerlvr vlgkggkerv vpfgvpaara vdawldegrp aletaasgaa lllgdrggrw
      241 gqrqvreavh rlaaragvdd vaphalrhsa athllqggsd lrsvqevlgh anlattqryt
      301 hvdaerlrav yaqafpra
//
LOCUS       WP_235915024            1058 aa            linear   BCT 02-MAR-2025
DEFINITION  immunoglobulin-like domain-containing protein [Flagellimonas
            ochracea].
ACCESSION   WP_235915024
VERSION     WP_235915024.1
KEYWORDS    RefSeq.
SOURCE      Flagellimonas ochracea
  ORGANISM  Flagellimonas ochracea
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flagellimonas.
REFERENCE   1  (residues 1 to 1058)
  AUTHORS   Noach,I., Ficko-Blean,E., Pluvinage,B., Stuart,C., Jenkins,M.L.,
            Brochu,D., Buenbrazo,N., Wakarchuk,W., Burke,J.E., Gilbert,M. and
            Boraston,A.B.
  TITLE     Recognition of protein-linked glycans as a determinant of peptidase
            activity
  JOURNAL   Proc Natl Acad Sci U S A 114 (5), E679-E688 (2017)
   PUBMED   28096352
REFERENCE   2  (residues 1 to 1058)
  AUTHORS   Glenwright,A.J., Pothula,K.R., Bhamidimarri,S.P., Chorev,D.S.,
            Basle,A., Firbank,S.J., Zheng,H., Robinson,C.V., Winterhalter,M.,
            Kleinekathofer,U., Bolam,D.N. and van den Berg,B.
  TITLE     Structural basis for nutrient acquisition by dominant members of
            the human gut microbiota
  JOURNAL   Nature 541 (7637), 407-411 (2017)
   PUBMED   28077872
REFERENCE   3  (residues 1 to 1058)
  AUTHORS   Malecki,P.H., Vorgias,C.E., Petoukhov,M.V., Svergun,D.I. and
            Rypniewski,W.
  TITLE     Crystal structures of substrate-bound chitinase from the
            psychrophilic bacterium Moritella marina and its structure in
            solution
  JOURNAL   Acta Crystallogr D Biol Crystallogr 70 (Pt 3), 676-684 (2014)
   PUBMED   24598737
REFERENCE   4  (residues 1 to 1058)
  AUTHORS   Malecki,P.H., Raczynska,J.E., Vorgias,C.E. and Rypniewski,W.
  TITLE     Structure of a complete four-domain chitinase from Moritella
            marina, a marine psychrophilic bacterium
  JOURNAL   Acta Crystallogr D Biol Crystallogr 69 (Pt 5), 821-829 (2013)
   PUBMED   23633591
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027718.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16403.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Flagellimonas ochracea"
                     /db_xref="taxon:2696472"
     Protein         1..1058
                     /product="immunoglobulin-like domain-containing protein"
                     /calculated_mol_wt=110851
     Region          47..362
                     /region_name="COG3291"
                     /note="Uncharacterized conserved protein, PKD repeat
                     domain [Function unknown]"
                     /db_xref="CDD:442520"
     Region          <57..99
                     /region_name="PKD_4"
                     /note="PKD domain; pfam18911"
                     /db_xref="CDD:436824"
     Region          638..711
                     /region_name="DUF5011"
                     /note="Domain of unknown function (DUF5011); pfam16403"
                     /db_xref="CDD:435320"
ORIGIN      
        1 mkqlltktkl isvfilalfl gcenddntll pqvlssftfn ldedtgtvef inisekatsy
       61 ewdfgdgdas teinpvktyg asgtytvvlt afntagasnt feseitinip ipptplalpi
      121 dfdgtnvayg divgdnigfs vvanpetgng ndtnvgqmet gggqfqnvqf plgtavdfsg
      181 dnktiqlelf astaidvlvk fedgaagard vevltthtgs gwetlsfdfa tdgvasfiqd
      241 dpqngqalvp dgqysgiilf igfsadpgve gtflvdniiq ttaepapsgc tdeliaatal
      301 pvdfegcetf lssenfgdgi tselvenpfk tgintsdfvl qidkptgssf fagvqntfes
      361 nfdltttdvf slkvystkan vvfrfelaln pqtvpptgnp tpvfvtipna newteveftf
      421 tglpggpmay nqlvikpdnp dgitdpvaeg gtyyiddlsl gtsggggggg aslddcggdl
      481 vndfetdtda ifanfgggvg tiidnpdtsv ntsakvgqyv knagadfagi tievdpdiaf
      541 dsgvfsidvy seavrqllfk leglnieviv ptsgtgweti tydfspvggn vgtvtaitli
      601 mdngtvgdgs adwtiqfdni rlcsngssgg gdttppvitl ngdavvnvnv gdsfvdpgat
      661 atddtdgpit gdivvggdtv dtntidtyii tynvsdaagn aaaevtrtvn vvdpsmpfsa
      721 aptppardpg dvislfsnay tditvdtfya afsvgggvsd vqvagndtkl ytdldfagve
      781 tlsasvdlss mtmfhidvws qnsvdfltrv vdfagdgfgg gndtqgdett nlsagswtsi
      841 dvsiadfqtg gftatptdfs qlildvvgvt gtvyvdniyf yndsgggggg gltplsslpa
      901 dfesgeefgg vfepasvngs iianpvsggi ntsanvyefn kpvgtefygg menvfaspld
      961 ltttrtfkvk iysskpnvvv qfelqsrptd pgipnysiqq tvtnanewve ltfdfgaivp
     1021 gtfnpniyna iviipdfdtg nnptsssety yiddvvle
//
LOCUS       WP_235915735             304 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease [Brucella anthropi].
ACCESSION   WP_235915735
VERSION     WP_235915735.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   Bujnicki,J.M. and Rychlewski,L.
  TITLE     Identification of a PD-(D/E)XK-like domain with a novel
            configuration of the endonuclease active site in the
            methyl-directed restriction enzyme Mrr and its homologs
  JOURNAL   Gene 267 (2), 183-191 (2001)
   PUBMED   11313145
REFERENCE   2  (residues 1 to 304)
  AUTHORS   Waite-Rees,P.A., Keating,C.J., Moran,L.S., Slatko,B.E.,
            Hornstra,L.J. and Benner,J.S.
  TITLE     Characterization and expression of the Escherichia coli Mrr
            restriction system
  JOURNAL   J Bacteriol 173 (16), 5207-5219 (1991)
   PUBMED   1650347
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016362.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04471.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..304
                     /product="restriction endonuclease"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_process="GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /calculated_mol_wt=33266
     Region          143..271
                     /region_name="Mrr_cat"
                     /note="Restriction endonuclease; cl46443"
                     /db_xref="CDD:480783"
ORIGIN      
        1 mlsfreaqtv edladlfydf lpgsgnnkta fpiaaaqagi adlwipgskr paivqlltst
       61 lerrrsnftk liiaivrqam tyrrgkgnpl traeidrlns llpgvefkip elldpgflns
      121 faqpktedpp aqsagtlsav kaqelathli eitqldpqtr glrfegflne lfagfglapr
      181 gsfrlvgeqi dgsfklhgqt ylveakwhgp qigfadlmtf sgkvagkasw srglfvsnsg
      241 ftadgleafs rgrqtnlica dgldlyevls rkvslidvld ektrraaetn rpfiavrdln
      301 lpgr
//
LOCUS       WP_235915786             257 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Brucella
            anthropi].
ACCESSION   WP_235915786
VERSION     WP_235915786.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 257)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..257
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=28441
     Region          2..>85
                     /region_name="PRK11242"
                     /note="DNA-binding transcriptional regulator CynR;
                     Provisional"
                     /db_xref="CDD:183051"
     Region          52..248
                     /region_name="PBP2_CrgA_like_8"
                     /note="The C-terminal substrate binding domain of an
                     uncharacterized LysR-type transcriptional regulator
                     CrgA-like, contains the type 2 periplasmic binding fold;
                     cd08477"
                     /db_xref="CDD:176166"
     Site            order(62,66,105,119,121,183,200,227)
                     /site_type="active"
                     /note="putative effector binding pocket [active]"
                     /db_xref="CDD:176166"
     Site            order(63..64,68..69,71..72,75,79,81..87,148,177..181,
                     188..189,192)
                     /site_type="other"
                     /note="putative dimerization interface [polypeptide
                     binding]"
                     /db_xref="CDD:176166"
ORIGIN      
        1 meglgvrllt rttrrqsltd sgqvfyerak nilaemdlae almaetrsep rgrlrisapv
       61 tfgshalape lseylrqhpe vsvdlnltnr nvdlveegfd vifragdlpd sslitkrlap
      121 yrlilcaapa ymnsasslkt pqdlvehecl ifthsslrth wsfigpegev tiaitgrfca
      181 nsgealraaa lsgmgilfqp yelvadeiss gklirllpey eppsralhal yasdrqmtpk
      241 lrsfldfate kfsdgkr
//
LOCUS       WP_235915771             412 aa            linear   BCT 02-MAR-2025
DEFINITION  rhamnan synthesis F family protein [Brucella anthropi].
ACCESSION   WP_235915771
VERSION     WP_235915771.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 412)
  AUTHORS   Shibata,Y., Yamashita,Y., Ozaki,K., Nakano,Y. and Koga,T.
  TITLE     Expression and characterization of streptococcal rgp genes required
            for rhamnan synthesis in Escherichia coli
  JOURNAL   Infect Immun 70 (6), 2891-2898 (2002)
   PUBMED   12010977
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016903.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05045.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..412
                     /product="rhamnan synthesis F family protein"
                     /calculated_mol_wt=46669
     Region          121..246
                     /region_name="RgpF"
                     /note="Lipopolysaccharide biosynthesis protein [Cell
                     wall/membrane/envelope biogenesis]; COG3754"
                     /db_xref="CDD:442968"
ORIGIN      
        1 mnwlavrayi rsaklvqaph ifmektprfl sdettrqpng dlyaivvkyn kfgvtpdflh
       61 llnelrhqni npivvcngrl sqpehdaika vaqrvlvrqn igrdfgayra atlllgaegl
      121 qlrrllyfnd simyvpgtgl rnmiaslads aydvvgtnen hefihhvgsy afsvsgkvfn
      181 daavrhfwsr yrpydirpha irkgevalse cfvrcgynid vlystdklal kldkmampdi
      241 vsnlrylpng afrsyelepl lagaiytgkm lskrsgkrna kpaaidemnl tptisqyskv
      301 mkgradtspa ddrgrlvgeq vrrevlvnhm mgivmngsqv hygfglfhrt mdsplikrdl
      361 llrgllfehd carildympa qqrepimrel lnrgrsvnvg gfrrfklrng ll
//
LOCUS       WP_235915792             346 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase domain-containing protein [Brucella
            anthropi].
ACCESSION   WP_235915792
VERSION     WP_235915792.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 346)
  AUTHORS   Xiong,Y. and Eickbush,T.H.
  TITLE     Origin and evolution of retroelements based upon their reverse
            transcriptase sequences
  JOURNAL   EMBO J 9 (10), 3353-3362 (1990)
   PUBMED   1698615
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00078.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..346
                     /product="reverse transcriptase domain-containing protein"
                     /calculated_mol_wt=39182
     Region          2..>292
                     /region_name="YkfC"
                     /note="Retron-type reverse transcriptase [Mobilome:
                     prophages, transposons]; COG3344"
                     /db_xref="CDD:442573"
ORIGIN      
        1 mgkkyrnlig kitsdanmrh ayrltssakr ltpgfleyne fsilnledla tsmrdgtyrp
       61 gqprefkiyd pkvrlisalp fedriaqhal caiigpifea tllprsfacr tgkgthaaai
      121 avqadmrrlt kgnqplyilk tdfsryfasi ehaklwqlie akiscratlr lieamlprhg
      181 iglpignlls qilaniygga vdrhlqqglg ekywyrymdd ivvlghsseh lrkvrtsied
      241 lsrdelglrf skwsihpasr ganfvgyriw pthkllrrds virarrkika yraggehkrl
      301 erflaawigh aqwadsrnll kslniqaqlp phpansgapi arkeva
//
LOCUS       WP_235915751            2651 aa            linear   BCT 02-MAR-2025
DEFINITION  autotransporter-associated beta strand repeat-containing protein
            [Brucella anthropi].
ACCESSION   WP_235915751
VERSION     WP_235915751.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 2651)
  AUTHORS   Doyle,M.T., Tran,E.N. and Morona,R.
  TITLE     The passenger-associated transport repeat promotes virulence factor
            secretion efficiency and delineates a distinct autotransporter
            subtype
  JOURNAL   Mol Microbiol 97 (2), 315-329 (2015)
   PUBMED   25869731
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024353.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12951.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2651
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..2651
                     /product="autotransporter-associated beta strand
                     repeat-containing protein"
                     /calculated_mol_wt=262780
     Region          <47..>1124
                     /region_name="PRK15319"
                     /note="fibronectin-binding autotransporter adhesin ShdA"
                     /db_xref="CDD:185219"
     Region          738..2553
                     /region_name="PRK15319"
                     /note="fibronectin-binding autotransporter adhesin ShdA"
                     /db_xref="CDD:185219"
     Region          1849..2651
                     /region_name="AidA"
                     /note="Autotransporter adhesin AidA [Cell
                     wall/membrane/envelope biogenesis, Intracellular
                     trafficking, secretion, and vesicular transport]; COG3468"
                     /db_xref="CDD:442691"
ORIGIN      
        1 mtfdggtlgl agdltraatl naggggldva tgashtysgv lsgtgglnkt gagtltlsgt
       61 ntysggtsln agtlivssds nlgtgaltfn ggtlglagdl traatlnagg gtidvatgas
      121 htysgvmsgt ggltktgdgt ltlsgtntys ggtslnagtl ivssdsnlgt galtfdggal
      181 glggdltlaa tlnagggtid vatgashsfs gklsgtgklt ktgagtltls gantysggtd
      241 inagtlavgg msalgtgplg fnggalqlta dvsfggtval gagggsietn tstnstfsgv
      301 msgagsltkt gagslklsgt nsytggtfin dgvlkvtsda nlgaatgavt lnggtletdg
      361 tfssarkmhl tadatihntg gaasfsgvvd gngaltietl nyytavtltg qntykggtvv
      421 adssllviss denlgdasgd ltlysystlr ladqfstnrk ihlasdsgwv dtnghdvifk
      481 gaidgtgmla kdgegtltls gnntfsggvg lvkgtlivsk denlgdkagv iefdggglql
      541 sgsgfssare lrlnaaamid tngfngtlsg vihngddpdy kgqltksgag tltlssvnty
      601 tggtvinggv vsvgadenlg aatgalsfng gllqltgsfd nsrvvtldag ggtiqtsllh
      661 sngfsgvigg agqltksgag tltlsgvnsy tggtavnggv lsvgadanlg aatgalsfgg
      721 gtlhltdsfd nsravtlggs ggtiettaak sngfsgvisg agkltktgag tlalsgvnsy
      781 tggtavnggv lsvgadenlg atagalsfng gtllltdsfd saravtlgvg ggtiettaak
      841 sndfsgvisg agkltkdgdg ilvlsgansy sgtttvskgt lqigngsttg sitgtvdias
      901 gatltfkrsd aytysdvikg agalhqdgsg tltltgtnty tggttisagt lqigngsttg
      961 siagnvdnng tlafnrsntl dfsgvisgtg ivqqngagsl tlsgdssafg gstsvasgtl
     1021 lvdgslggtv svasgasfgg agtiggnvtv aegaslvgqa gqvltfdknl slannstiea
     1081 sfggasqtgl fnvkgdltlg gtinvgtfgd dgpgiytvfd ysgnltdntl svgtlpsgqd
     1141 aakvsvqtnq sgkvnilntn ggeltfwdgd daanqgdgvp nggdgtwtne asnkswtdhn
     1201 yllngpwdds gfaiftgakg tvtidnsaga vkasgmqfqt dgyevtggdl tlvspasnls
     1261 gapiirvggg tndgdmkati saklvgtdgm rktyagrlvl tadnqytggt dilggtlqlg
     1321 dggtsgsvlg didtgidgin rgllavdrsg tvtvdntitg tgvvsitgsg eitlsgnnsy
     1381 sggtyvrsgt lviaqddnlg laesvvavga dpedvaggat gnavlkfgad ftgantftht
     1441 ielntaqsql dtnghtvias gvilgsdglt ktgdgtlilt ynndydggtt isngtlqign
     1501 ggtsgtiegd vtnngilafn rsdayafddk isgtgsveqi gtdtltltga ndytggtsvk
     1561 sgtlavasng vlgalsgalt ldggtfenta afstksraia igagggtfqt dadltlegal
     1621 tgtgtwtktg tgdlifggde safagtgtvq tgtvrvdgtl ggdlavqtga tlrgtgtidg
     1681 nttidsgatl vgldnntltm ngnltlangs mtnialgtpt gsalfdvkgd ltlggtlnvt
     1741 edvggfgagv yrifdyggtl tdngmtigtv pqnsdasgmw iqtdyehqvn lvnqngvevt
     1801 fwnaegdrsq nnqnskivgg sgtwdvrndn wteddkgsqq gqlfngrwdn gsfavfggna
     1861 gtvtinnqng tvtasglnfa tdgyvltgda lmldngapgt apiirvgdgk adsnitatis
     1921 aelqgtgglr ktdygtlvlt gansysggtt vtggvlqigd ggntgsikgd vavssgaygd
     1981 gtlafnrsdd tefdgnitgd gkggvvqkgt gtttftgdnt fsggltveng gvkagvagha
     2041 fgtgtlkvka gatadlggfd ttvgglaafd asgttgdgdi algsgkltve qsfdskfsgv
     2101 isgtgdltks gtgtltlnta gtytgatnvd ggtlkqgaag vfnnassgyt vgtdgtldlg
     2161 gfdttlaals ngglitmgtq qtagttlsvt gnytgtggtv vintvlgdds sktdrlkvgg
     2221 dtsgttnlkv nnrgglgaqt vngievveva gqsngtfslv sdyttkdgqk avvggayayt
     2281 lqqgagsgnk dgnwyltsqt tqeppapdcq qtntcpvdpd nprysagvpv yqgyaqnmqv
     2341 lnklptlqer vgnryltsgn dndasntdss tvdsrgiwar iegahnrlep hsatgmkqdi
     2401 nsfimqtgvd gqfyedangk liagitgqyg tahgnsssff gdgytdtsaw slgatatwyg
     2461 ndgfyvdtqg qltwfdndln sdtansglad gakafgyals aevgqriald ehwsltpqaq
     2521 lmwssldada fhdiwgnrvh mqdgdsltar fglaanyqds wqgddgrmvn tsvygianvy
     2581 qeflggtrin vagvnvdtdn dktwagigag gtyawadsky aiygqgsint slnhltdsya
     2641 vkgnigftir w
//
LOCUS       WP_235915805             363 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6456 domain-containing protein [Thalassovita mangrovi].
ACCESSION   WP_235915805
VERSION     WP_235915805.1
KEYWORDS    RefSeq.
SOURCE      Thalassovita mangrovi
  ORGANISM  Thalassovita mangrovi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Thalassovita.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040428.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20057.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Thalassovita mangrovi"
                     /db_xref="taxon:2692236"
     Protein         1..363
                     /product="DUF6456 domain-containing protein"
                     /calculated_mol_wt=39962
     Region          235..353
                     /region_name="DUF6456"
                     /note="Domain of unknown function (DUF6456); pfam20057"
                     /db_xref="CDD:437889"
ORIGIN      
        1 msdslrmefg akglpdwvpg svrlylehte mglsmrrlaq rsgchastvm rqirklenrr
       61 ddrlvdealk rlcgqyasav ragfpqretq kecqmtvrkt tactlpnear ltaealrilp
      121 rlcettavla vaaemekavv vreddsgnst rtavvdrgia eamalkdwid ctdpgrisry
      181 hitaegraal trlmaqaetr aqagfaeapa gfamapgdre vfdpasvrss trrnrynaae
      241 spmmllarrk dregnpflsa dlvaagerlr edfelsrmea lpdrdgtgqg petarervan
      301 alrdlgpglg dvalrcccyl egletaekrm gwsarsgkiv lrialqrlkm hydslgdtaa
      361 mig
//
LOCUS       WP_235915827             138 aa            linear   BCT 02-MAR-2025
DEFINITION  Hint domain-containing protein [Thalassovita mangrovi].
ACCESSION   WP_235915827
VERSION     WP_235915827.1
KEYWORDS    RefSeq.
SOURCE      Thalassovita mangrovi
  ORGANISM  Thalassovita mangrovi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Thalassovita.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13403.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Thalassovita mangrovi"
                     /db_xref="taxon:2692236"
     Protein         1..138
                     /product="Hint domain-containing protein"
                     /calculated_mol_wt=15315
     Region          1..129
                     /region_name="Hint"
                     /note="Hedgehog/Intein domain, found in Hedgehog proteins
                     as well as proteins which contain inteins and undergo
                     protein splicing (e.g. DnaB, RIR1-2, GyrA and Pol). In
                     protein splicing an intervening polypeptide sequence - the
                     intein - is excised from a protein; cl22434"
                     /db_xref="CDD:451395"
ORIGIN      
        1 mpgtlvlted galpvetlap gdriitrntg lvtlkaiehd feicetvrir agslghdrpd
       61 adtilpsrqk ilirdwraka lycedealvd arrlidgeyv rlqpraqhmv frlyfddpqv
      121 iyadglelec atapvmag
//
LOCUS       WP_235915839             319 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Thalassovita mangrovi].
ACCESSION   WP_235915839
VERSION     WP_235915839.1
KEYWORDS    RefSeq.
SOURCE      Thalassovita mangrovi
  ORGANISM  Thalassovita mangrovi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Thalassovita.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12697.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Thalassovita mangrovi"
                     /db_xref="taxon:2692236"
     Protein         1..319
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=35120
     Region          41..291
                     /region_name="Hydrolase_4"
                     /note="Serine aminopeptidase, S33; pfam12146"
                     /db_xref="CDD:463473"
ORIGIN      
        1 mqtapflsdc iddflpgraf waqtedglri rlgvwneeae kgtvllfpgr teyiekyaht
       61 agdmaragya tlavdwrgqg ladrmldnpk ighvgafsdy qhdvqaavaa akrlelpkpw
      121 fllahsmggc iglralhegl pveasvfsap mwglqiaprk rplawvlsws srylgtsenm
      181 vpdtledayv svapfedntl ttdpamwelm rdqlaqhpel slagpslnwl ygalsemlcl
      241 srmrspalpc ltylggneri vaqdrirdrm tawpggklmd vpgaeheilm eapdirhran
      301 aeiqgffdav aagkppyga
//
LOCUS       WP_235915876             292 aa            linear   BCT 02-MAR-2025
DEFINITION  OmpA family protein [Thalassovita mangrovi].
ACCESSION   WP_235915876
VERSION     WP_235915876.1
KEYWORDS    RefSeq.
SOURCE      Thalassovita mangrovi
  ORGANISM  Thalassovita mangrovi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Thalassovita.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012894.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00691.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Thalassovita mangrovi"
                     /db_xref="taxon:2692236"
     Protein         1..292
                     /product="OmpA family protein"
                     /calculated_mol_wt=31017
     Region          89..>264
                     /region_name="acidobact_VWFA"
                     /note="VWFA-related Acidobacterial domain; TIGR03436"
                     /db_xref="CDD:274577"
     Region          184..288
                     /region_name="OmpA_C-like"
                     /note="Peptidoglycan binding domains similar to the
                     C-terminal domain of outer-membrane protein OmpA; cd07185"
                     /db_xref="CDD:143586"
     Site            order(189..190,223..224,227,231..232,235,278,282)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:143586"
ORIGIN      
        1 meltlpaaat alsdervamd sydlptgpya dgqmpkesfe ghvtrqswrv aaqgltslql
       61 laplreqlqd agydivfecd tldcggfdfr fetevlpapa mhvdlsdfrf lsaqngpddh
      121 lgllvsrsan agfiqlirvt kdaqalpvkp stgavlpgia etprplpsdp vgvlvaqghv
      181 vlgdltfetg saslgegpya sldalaefll ddpsrrialv ghtdavgald nnialskrra
      241 asvlerlaar ygvprgqmsa egmgylapia pnqtpegret nrrveavlln td
//
LOCUS       WP_235915881             116 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5665 domain-containing protein [Thalassovita mangrovi].
ACCESSION   WP_235915881
VERSION     WP_235915881.1
KEYWORDS    RefSeq.
SOURCE      Thalassovita mangrovi
  ORGANISM  Thalassovita mangrovi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Thalassovita.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040137.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18910.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Thalassovita mangrovi"
                     /db_xref="taxon:2692236"
     Protein         1..116
                     /product="DUF5665 domain-containing protein"
                     /calculated_mol_wt=12729
     Region          49..104
                     /region_name="DUF5665"
                     /note="Domain of unknown function (DUF5665); pfam18910"
                     /db_xref="CDD:436823"
ORIGIN      
        1 mgyptvtqmp dtpdprdaht dqeavdairq ltleverlnn hrfiavqnsv trlllfnfar
       61 glafglgsvl gasllvsilt wwlsqfeflp vigdwmaila deferatgag vnqgtq
//
LOCUS       WP_235915803             199 aa            linear   BCT 02-MAR-2025
DEFINITION  histidine phosphotransferase family protein [Thalassovita
            mangrovi].
ACCESSION   WP_235915803
VERSION     WP_235915803.1
KEYWORDS    RefSeq.
SOURCE      Thalassovita mangrovi
  ORGANISM  Thalassovita mangrovi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Thalassovita.
REFERENCE   1  (residues 1 to 199)
  AUTHORS   Fioravanti,A., Clantin,B., Dewitte,F., Lens,Z., Verger,A.,
            Biondi,E.G. and Villeret,V.
  TITLE     Structural insights into ChpT, an essential dimeric histidine
            phosphotransferase regulating the cell cycle in Caulobacter
            crescentus
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 68 (Pt 9),
            1025-1029 (2012)
   PUBMED   22949187
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021595.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10090.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Thalassovita mangrovi"
                     /db_xref="taxon:2692236"
     Protein         1..199
                     /product="histidine phosphotransferase family protein"
                     /calculated_mol_wt=21483
     Region          8..199
                     /region_name="HPt"
                     /note="Histidine phosphotransfer protein ChpT, HPt domain
                     [Signal transduction mechanisms]; COG5385"
                     /db_xref="CDD:444148"
ORIGIN      
        1 mrhsnqsltq lvgsrichdl ispigaigng leliqmqsqw tdspelalia qslhhasari
       61 rfyriafgla sdtqqlgvge issiladmtr dgrvsydwqg gegcarselr lvflgllcle
      121 talplgggia itsydgrwql rgagdrirwe dgawsgdvin tageigadrv qfallldelq
      181 qqgrdlttev gdtsalisf
//
LOCUS       WP_235915920             429 aa            linear   BCT 02-MAR-2025
DEFINITION  M48 family metalloprotease [Thalassovita mangrovi].
ACCESSION   WP_235915920
VERSION     WP_235915920.1
KEYWORDS    RefSeq.
SOURCE      Thalassovita mangrovi
  ORGANISM  Thalassovita mangrovi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Thalassovita.
REFERENCE   1  (residues 1 to 429)
  AUTHORS   Quigley,A., Dong,Y.Y., Pike,A.C., Dong,L., Shrestha,L.,
            Berridge,G., Stansfeld,P.J., Sansom,M.S., Edwards,A.M., Bountra,C.,
            von Delft,F., Bullock,A.N., Burgess-Brown,N.A. and Carpenter,E.P.
  TITLE     The structural basis of ZMPSTE24-dependent laminopathies
  JOURNAL   Science 339 (6127), 1604-1607 (2013)
   PUBMED   23539603
REFERENCE   2  (residues 1 to 429)
  AUTHORS   Pryor,E.E. Jr., Horanyi,P.S., Clark,K.M., Fedoriw,N.,
            Connelly,S.M., Koszelak-Rosenblum,M., Zhu,G., Malkowski,M.G.,
            Wiener,M.C. and Dumont,M.E.
  TITLE     Structure of the integral membrane protein CAAX protease Ste24p
  JOURNAL   Science 339 (6127), 1600-1604 (2013)
   PUBMED   23539602
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013594.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01435.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Thalassovita mangrovi"
                     /db_xref="taxon:2692236"
     Protein         1..429
                     /product="M48 family metalloprotease"
                     /EC_number="3.4.24.-"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=45802
     Region          25..208
                     /region_name="M48C_Oma1-like"
                     /note="Oma1 peptidase-like, integral membrane
                     metallopeptidase; cd07324"
                     /db_xref="CDD:320683"
     Site            order(83..84,87,150,154,196)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:320683"
     Site            order(83,87,150,196)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:320683"
     Region          257..376
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          257..283
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(259..260,263..264,266,290,293..294,297..298,
                     300..301,324,327..328,331..332,335)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          288..318
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          323..349
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mlshslpara vtllrdadve yalgrlaqpi lnaaglpsgs vkvvvirdss lnafvidhqh
       61 ifihsglllk mqtadelqav laheaahman ghiaqryana rfsntisglg valaaaaaas
      121 gadpraagal slgvgssasr vfmshtraee ssadnsairy mlsagadpqa mvdllnifrg
      181 qellnqsrqd pyarthpltr drlravqaqv taaqakpgkt deadywfara qgklsaflra
      241 pswtlrrada sptkdiallr qavayhrqpd takalatmdk llamrpddpy lhdlhgqill
      301 esrraeaava aygraaalap rnalilggqg rallaagqpk ralqvleqar ardfsdarvl
      361 rdlatayakt gntgmaslvt aeryaltgrl kdsqihakra adllprgsap wlrsqdvlsa
      421 aeahaskrk
//
LOCUS       WP_235916015             210 aa            linear   BCT 02-MAR-2025
DEFINITION  nitroreductase/quinone reductase family protein [Antrihabitans
            cavernicola].
ACCESSION   WP_235916015
VERSION     WP_235916015.1
KEYWORDS    RefSeq.
SOURCE      Antrihabitans cavernicola
  ORGANISM  Antrihabitans cavernicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Antrihabitans.
REFERENCE   1  (residues 1 to 210)
  AUTHORS   Gurumurthy,M., Rao,M., Mukherjee,T., Rao,S.P., Boshoff,H.I.,
            Dick,T., Barry,C.E. 3rd and Manjunatha,U.H.
  TITLE     A novel F(420) -dependent anti-oxidant mechanism protects
            Mycobacterium tuberculosis against oxidative stress and
            bactericidal agents
  JOURNAL   Mol Microbiol 87 (4), 744-755 (2013)
   PUBMED   23240649
REFERENCE   2  (residues 1 to 210)
  AUTHORS   Singh,R., Manjunatha,U., Boshoff,H.I., Ha,Y.H., Niyomrattanakit,P.,
            Ledwidge,R., Dowd,C.S., Lee,I.Y., Kim,P., Zhang,L., Kang,S.,
            Keller,T.H., Jiricek,J. and Barry,C.E. 3rd.
  TITLE     PA-824 kills nonreplicating Mycobacterium tuberculosis by
            intracellular NO release
  JOURNAL   Science 322 (5906), 1392-1395 (2008)
   PUBMED   19039139
REFERENCE   3  (residues 1 to 210)
  AUTHORS   Manjunatha,U.H., Boshoff,H., Dowd,C.S., Zhang,L., Albert,T.J.,
            Norton,J.E., Daniels,L., Dick,T., Pang,S.S. and Barry,C.E. 3rd.
  TITLE     Identification of a nitroimidazo-oxazine-specific protein involved
            in PA-824 resistance in Mycobacterium tuberculosis
  JOURNAL   Proc Natl Acad Sci U S A 103 (2), 431-436 (2006)
   PUBMED   16387854
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016001.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04075.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Antrihabitans cavernicola"
                     /db_xref="taxon:2495913"
     Protein         1..210
                     /product="nitroreductase/quinone reductase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=23082
     Region          97..204
                     /region_name="Pyridoxine 5'-phosphate (PNP) oxidase-like
                     and flavin reductase-like proteins"
                     /note="The PNPOx-like superfamily is composed of
                     pyridoxine 5'-phosphate (PNP) oxidases and other flavin
                     mononucleotide (FMN) binding proteins, which catalyze
                     FMN-mediated redox reactions. Flavin reductases catalyze
                     the reduction of FMN or FAD using NAD(P)H as...; cl00381"
                     /db_xref="CDD:469750"
ORIGIN      
        1 meqydrmetl ssvrrravvt gsigaavlsw llwridptag nspvqpmvvs allvanvvlt
       61 vvrpdlkrav vaavqravvn pivgalfrig vvpfgyalle ttgrksglpr ripvgnglcg
      121 ntfwivaehg idagyvrnli adphvrvklr rglrfvwvdg vatmtsddpl rrqrelcgwh
      181 plrwlnaitv rtlgtdlvav rvdlqtlrpr
//
LOCUS       WP_235916064             322 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Antrihabitans
            cavernicola].
ACCESSION   WP_235916064
VERSION     WP_235916064.1
KEYWORDS    RefSeq.
SOURCE      Antrihabitans cavernicola
  ORGANISM  Antrihabitans cavernicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Antrihabitans.
REFERENCE   1  (residues 1 to 322)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 322)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 322)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 322)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Antrihabitans cavernicola"
                     /db_xref="taxon:2495913"
     Protein         1..322
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=33540
     Region          13..309
                     /region_name="drrA"
                     /note="daunorubicin resistance ABC transporter ATP-binding
                     subunit; TIGR01188"
                     /db_xref="CDD:130256"
ORIGIN      
        1 mtgsailaed lvktfgtdar aldgvslqva pgtvlgllgp ngagkttvvn ilttllhpds
       61 gravvagidv lhdpaavrrs iglagqfaav ddiltgaenl tlvgrlnhlp tsqakvrare
      121 lleqfgladv gdrsaktysg gmrrrldlaa alvarppvlf ldepttgldp rsrielwevi
      181 eelvrggttl llttqyleea drladsiavv drgrviaegt atelksqmgg grievrmnda
      241 teanrvaevl agagagettv hddtvqvpaa dgtsvlgevv rrldaaglva rglqlrepsl
      301 ddvflsltgh gadqaepteg rs
//
LOCUS       WP_235916285             533 aa            linear   BCT 02-MAR-2025
DEFINITION  esterase-like activity of phytase family protein [Antrihabitans
            cavernicola].
ACCESSION   WP_235916285
VERSION     WP_235916285.1
KEYWORDS    RefSeq.
SOURCE      Antrihabitans cavernicola
  ORGANISM  Antrihabitans cavernicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Antrihabitans.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13449.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Antrihabitans cavernicola"
                     /db_xref="taxon:2495913"
     Protein         1..533
                     /product="esterase-like activity of phytase family
                     protein"
                     /calculated_mol_wt=55037
     Region          <54..105
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
     Region          128..489
                     /region_name="COG4222"
                     /note="Uncharacterized conserved protein, contains a
                     phytase-like domain [Function unknown]"
                     /db_xref="CDD:443366"
ORIGIN      
        1 mmdmgskrvg avvavavlaa lagcsddssn tekpkdsafa ltakdgqatt fgsgdllrgt
       61 datavvgvsd pkngkiavaa dgsysytpnp gftgtdtfty nttdavhnyt tsipplgevg
      121 gvkisgsgyg sswtpapgva geyfgltdrg pnvdgvqdnq kvepipsftp aigrfkladg
      181 kaellqsipl kaadgsplng qvsteastge tivdingavl ppspngydpe gvvaladgtf
      241 wvsdeygpyi thfgadgrat erlspfdatl pgelklrtpn qgmegltitp dgkklvgimq
      301 salktpgldg saksvpfari vtvdlaskkt aeflypldnp kktkvansei talsnttfvv
      361 derdgefepg adkklwtidi tgatdvgpqs tvagarydag aggllvgdkp letlvgptdt
      421 dgavktlqds gittvrktss ldlgglltsl nkdgkffghd kvegvaaidn gtkfvisndn
      481 dfgivgvtnk qppftlkekd lpngtqdage ilivdttklp akvtehtasv evk
//
LOCUS       WP_235916197             216 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Antrihabitans cavernicola].
ACCESSION   WP_235916197
VERSION     WP_235916197.1
KEYWORDS    RefSeq.
SOURCE      Antrihabitans cavernicola
  ORGANISM  Antrihabitans cavernicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Antrihabitans.
REFERENCE   1  (residues 1 to 216)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Antrihabitans cavernicola"
                     /db_xref="taxon:2495913"
     Protein         1..216
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=22413
     Region          2..207
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mtpvrvliad dhaairsglr lilgnadgie vigeaadgdi aiaqtialrp dvvlmdvrmp
       61 gldgiaater itadgdarvl ilttfdidey vfralragas gfllksasad alvdavrava
      121 agegvlapqv trtlidafaa tashpavqpa gldtlterer evltcvgdgl snaqigarlf
      181 igeatvkthv srvltkldvr srvqaaivaq gmdnqp
//
LOCUS       WP_235916353             427 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Antrihabitans cavernicola].
ACCESSION   WP_235916353
VERSION     WP_235916353.1
KEYWORDS    RefSeq.
SOURCE      Antrihabitans cavernicola
  ORGANISM  Antrihabitans cavernicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Antrihabitans.
REFERENCE   1  (residues 1 to 427)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 427)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 427)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 427)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Antrihabitans cavernicola"
                     /db_xref="taxon:2495913"
     Protein         1..427
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=45499
     Region          46..408
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mkrqsrrglh rtaltasavl mtsalalsac gfggddssss sngkttisfl aptyrdgadg
       61 tkalwdgiik dfeaknpnid vnlemqswdn indvvrtklq sqdttpdiln idayasfatd
      121 nllyeakdvv sdsvlkdfqp gfvknaslng tqfglplfas trtlfynqdl fnqagitapp
      181 ktwdelldts kkisalgngv sgygmplgse eaqgetsiwt fgaggnwsng tdltidtpen
      241 vdgvtamkrm idekatqpnp gasdrtplin tfiqgklgmi eglpptvaqi aqknpglkya
      301 tapiptktgd pvtlgvadhl mafkkdgskk davksfldyf yspdvyanfv ktegfipits
      361 saaevlkdep ttkpflatlp nakfypsnnp kwpaaqgaiq qtigtidqga sladvigkin
      421 qaansgn
//
LOCUS       WP_235916454             403 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF2336 domain-containing protein
            [Alphaproteobacteria].
ACCESSION   WP_235916454
VERSION     WP_235916454.1
KEYWORDS    RefSeq.
SOURCE      Alphaproteobacteria (a-proteobacteria)
  ORGANISM  Alphaproteobacteria
            Bacteria; Pseudomonadati; Pseudomonadota.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021603.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10098.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Alphaproteobacteria"
                     /db_xref="taxon:28211"
     Protein         1..403
                     /product="DUF2336 domain-containing protein"
                     /calculated_mol_wt=43122
     Region          1..>132
                     /region_name="COG5330"
                     /note="Uncharacterized conserved protein, DUF2336 family
                     [Function unknown]"
                     /db_xref="CDD:444118"
     Region          86..341
                     /region_name="DUF2336"
                     /note="Uncharacterized protein conserved in bacteria
                     (DUF2336); pfam10098"
                     /db_xref="CDD:431052"
ORIGIN      
        1 midqfrelek pvgarkrdvv lmatvtsfea lpfpgkselr qfaelftply kasseearrq
       61 avaalsqcpn vpgavalfia sqpisiaapf lvaspcltdd llimiartqg gaharaivrr
      121 adlsptvida lvglrhsepk rtapraenme aetetkssaa vapakaepva trvakrligg
      181 wkttktakpa tpasapaass vaatspvaet daarpgldaa ereeqlrdqi rqltihmnrp
      241 sadrlglrti tpiqaallvr fartreggaf attladtlss srwlaerill dlsghqlatt
      301 ligigmepdd alyvlerlyp hlgqrlpaat raahlwnsld pveceariet wrradsytfr
      361 pqeaappqpa dtpaagapaa rsapglslvs ndqsrqglrq rag
//
LOCUS       WP_235916468             435 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)/FAD-dependent oxidoreductase [Antrihabitans cavernicola].
ACCESSION   WP_235916468
VERSION     WP_235916468.1
KEYWORDS    RefSeq.
SOURCE      Antrihabitans cavernicola
  ORGANISM  Antrihabitans cavernicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Antrihabitans.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11458465
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Antrihabitans cavernicola"
                     /db_xref="taxon:2495913"
     Protein         1..435
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /EC_number="1.-.-.-"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=47291
     Region          7..426
                     /region_name="Ppro0129"
                     /note="Predicted flavin-containing amine oxidase [General
                     function prediction only]; COG2907"
                     /db_xref="CDD:442151"
ORIGIN      
        1 mstddqrrtv avigsgvagl taayvlskrd avtlyeadtr lgghahthhv vqdngisldv
       61 dtgfivhndr typtllrlfg elgvatqesd msmsvrsdvd dleyagakgl pglfprlrml
      121 grprylkmlg evtrfhraar avldatdsaa depladflar nnfseffvdh fmtplvaavw
      181 scdprlasdy parylfafld hhgmlsvtgs ptwrtvtggs aryvekvaqt lhevrvgspv
      241 hridrtsdgv dvvetsgatr rfgavviavh prhalamlga pselesavls ampysvnkak
      301 lhtdqsllpr apraraswny lipahesdgv ivtydmtrlm rlqagddrry lvtlggdglv
      361 dpatviaemt yehpiytpes vaaqrrlpel gsdvvafaga yhgwgfhedg arsglraaer
      421 lgatwdvgav lepat
//
LOCUS       WP_235916521             492 aa            linear   BCT 02-MAR-2025
DEFINITION  dynamin family protein [Antrihabitans cavernicola].
ACCESSION   WP_235916521
VERSION     WP_235916521.1
KEYWORDS    RefSeq.
SOURCE      Antrihabitans cavernicola
  ORGANISM  Antrihabitans cavernicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Antrihabitans.
REFERENCE   1  (residues 1 to 492)
  AUTHORS   Warnock,D.E. and Schmid,S.L.
  TITLE     Dynamin GTPase, a force-generating molecular switch
  JOURNAL   Bioessays 18 (11), 885-893 (1996)
   PUBMED   8939066
REFERENCE   2  (residues 1 to 492)
  AUTHORS   Obar,R.A., Collins,C.A., Hammarback,J.A., Shpetner,H.S. and
            Vallee,R.B.
  TITLE     Molecular cloning of the microtubule-associated mechanochemical
            enzyme dynamin reveals homology with a new family of GTP-binding
            proteins
  JOURNAL   Nature 347 (6290), 256-261 (1990)
   PUBMED   2144893
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012570.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00350.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Antrihabitans cavernicola"
                     /db_xref="taxon:2495913"
     Protein         1..492
                     /product="dynamin family protein"
                     /calculated_mol_wt=52860
     Region          42..267
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            48..55
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206739"
     Site            order(50..56,144,208..209,211,248..250)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206739"
     Site            75
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206739"
     Site            order(79,124..125)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206739"
     Site            141..144
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206739"
     Site            order(143..144,170..171)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206739"
     Site            208..211
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206739"
     Site            248..250
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206739"
ORIGIN      
        1 mspidtlyea rtlvhdacrt yaddpmirpq veecarrldq plrvalagsi kagkstllna
       61 lvgqdiaptd atectrvvtw yrsgptptvt awygggrqfn vpvqrreggl tfdlgtvtsd
      121 qvdhldvqwp araladttvi dtpgtsslsr dvsqrtldll tpdnaasgad avvyllrsls
      181 aadvsfldri gshvgadsgp lgvvgvvsra devgagrida mmsakdmaar fstelertgl
      241 cqavvpvagl lafaartlrq sefaafeals hvsaddmhla llsadrfarp dsplpvdart
      301 rseltrrfgl fgirlavtlv klgardsptl aaelversgl delrqvidvq fgqradqlka
      361 hsalvtlerv lagrndraaa sivpaaqrll advhsfaelr llgrlrttam vlpdddltel
      421 qrlvggygis ptrrlgipdd sdastqqtaa vdavrkwrar aahplvdrft anacgigars
      481 aegvlerlrw rd
//
LOCUS       WP_235916640             133 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: NUDIX domain-containing protein
            [Alphaproteobacteria].
ACCESSION   WP_235916640
VERSION     WP_235916640.1
KEYWORDS    RefSeq.
SOURCE      Alphaproteobacteria (a-proteobacteria)
  ORGANISM  Alphaproteobacteria
            Bacteria; Pseudomonadati; Pseudomonadota.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Alphaproteobacteria"
                     /db_xref="taxon:28211"
     Protein         1..133
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=14787
     Region          4..116
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mgdrpdedei alvasrtngt wgipkghvel geslrqaaer eafeeagakg vtlepaigqf
       61 syykegrllr ysvsvhllfv qtiapyfpen nerqikwvpl tgaarevanr elsriiasvr
      121 thplyeehag rdl
//
LOCUS       WP_235916653             375 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF3644 domain-containing protein
            [Alphaproteobacteria].
ACCESSION   WP_235916653
VERSION     WP_235916653.1
KEYWORDS    RefSeq.
SOURCE      Alphaproteobacteria (a-proteobacteria)
  ORGANISM  Alphaproteobacteria
            Bacteria; Pseudomonadati; Pseudomonadota.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023776.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12358.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Alphaproteobacteria"
                     /db_xref="taxon:28211"
     Protein         1..375
                     /product="DUF3644 domain-containing protein"
                     /calculated_mol_wt=42321
     Region          98..171
                     /region_name="DUF3644"
                     /note="Protein of unknown function (DUF3644); pfam12358"
                     /db_xref="CDD:463549"
     Region          <145..>262
                     /region_name="PRK15386"
                     /note="type III secretion effector GogB"
                     /db_xref="CDD:237954"
ORIGIN      
        1 mlsrkyvpqd iqayfsrptr sinnarisei kdgtkhkaik aasddeldtf ldswpnidpa
       61 tglhlqgdel lvkareamia avhtfnsagl hfraelfivt aiiawtyllh ayykregidy
      121 rhkkagvver tpsgaerywe lsqcittgac plqsgvvnnl kflieirnei ehrstnridd
      181 alsaklqacc infndaikdl fgrefalekr lpialqfvtf dgvqrqslia tdlpthiatv
      241 mdnfhaalse eeqkdpkfrf rvafvpkias kpskadlave fikpgspeae avervllkev
      301 erpkflpgei vakaqaagya gfnmydhtkl tqqldarnpg kgygvkvant wywyenwlek
      361 vleklnegwt rppkt
//
LOCUS       WP_235916658             314 aa            linear   BCT 02-MAR-2025
DEFINITION  urease accessory protein UreD [Antrihabitans cavernicola].
ACCESSION   WP_235916658
VERSION     WP_235916658.1
KEYWORDS    RefSeq.
SOURCE      Antrihabitans cavernicola
  ORGANISM  Antrihabitans cavernicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Antrihabitans.
REFERENCE   1  (residues 1 to 314)
  AUTHORS   Farrugia,M.A., Wang,B., Feig,M. and Hausinger,R.P.
  TITLE     Mutational and Computational Evidence That a Nickel-Transfer Tunnel
            in UreD Is Used for Activation of Klebsiella aerogenes Urease
  JOURNAL   Biochemistry 54 (41), 6392-6401 (2015)
   PUBMED   26401965
REFERENCE   2  (residues 1 to 314)
  AUTHORS   Farrugia,M.A., Macomber,L. and Hausinger,R.P.
  TITLE     Biosynthesis of the urease metallocenter
  JOURNAL   J Biol Chem 288 (19), 13178-13185 (2013)
   PUBMED   23539618
REFERENCE   3  (residues 1 to 314)
  AUTHORS   Moncrief,M.B. and Hausinger,R.P.
  TITLE     Characterization of UreG, identification of a UreD-UreF-UreG
            complex, and evidence suggesting that a nucleotide-binding site in
            UreG is required for in vivo metallocenter assembly of Klebsiella
            aerogenes urease
  JOURNAL   J Bacteriol 179 (13), 4081-4086 (1997)
   PUBMED   9209019
REFERENCE   4  (residues 1 to 314)
  AUTHORS   Neyrolles,O., Ferris,S., Behbahani,N., Montagnier,L. and
            Blanchard,A.
  TITLE     Organization of Ureaplasma urealyticum urease gene cluster and
            expression in a suppressor strain of Escherichia coli
  JOURNAL   J Bacteriol 178 (3), 647-655 (1996)
   PUBMED   8550495
  REMARK    Erratum:[J Bacteriol. 1996 May;178(9):2725. doi:
            10.1128/jb.178.9.2725-2725.1996.. PMID: 8626347]
REFERENCE   5  (residues 1 to 314)
  AUTHORS   Park,I.S., Carr,M.B. and Hausinger,R.P.
  TITLE     In vitro activation of urease apoprotein and role of UreD as a
            chaperone required for nickel metallocenter assembly
  JOURNAL   Proc Natl Acad Sci U S A 91 (8), 3233-3237 (1994)
   PUBMED   7909161
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10002853
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Antrihabitans cavernicola"
                     /db_xref="taxon:2495913"
     Protein         1..314
                     /product="urease accessory protein UreD"
                     /GO_function="GO:0016151 - nickel cation binding [Evidence
                     IEA]"
                     /GO_process="GO:0008152 - metabolic process [Evidence
                     IEA]"
                     /calculated_mol_wt=34005
     Region          31..312
                     /region_name="UreH"
                     /note="Urease accessory protein UreH [Posttranslational
                     modification, protein turnover, chaperones]; COG0829"
                     /db_xref="CDD:440591"
ORIGIN      
        1 mtavlpldrf saehyqptrv prevlrhsgv pymlgvgapg kvgllelgfe rvtertelvr
       61 ryqksplqim rplyidplrp dlavvflmst gggivqadrl rmdidcgadt svhlttqaat
      121 rvhrmdrdya tqvthldvgp rsyveylpes vipyggaryy qqtvvtadpt atiligegvh
      181 tgrhahgehh hydvfasdle irrpdgdlva vdavrldpgt apvagpgvlg nhtlmstfya
      241 vsplrpaadi ataihtalqg apvsfgtsvl pqdsgawvrv lgndspamva amrsvwnavr
      301 qslidvpapa lrkt
//
LOCUS       WP_235916665             205 aa            linear   BCT 02-MAR-2025
DEFINITION  urea transporter [Antrihabitans cavernicola].
ACCESSION   WP_235916665
VERSION     WP_235916665.1
KEYWORDS    RefSeq.
SOURCE      Antrihabitans cavernicola
  ORGANISM  Antrihabitans cavernicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Antrihabitans.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015226.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03253.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Antrihabitans cavernicola"
                     /db_xref="taxon:2495913"
     Protein         1..205
                     /product="urea transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015204 - urea transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0071918 - urea transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=21294
     Region          <3..196
                     /region_name="UT"
                     /note="Urea transporter; cl01829"
                     /db_xref="CDD:470365"
ORIGIN      
        1 masaavagvl gtwniptlti pfcliasvmt isapnfqhiw ngraaetglg qpvlgrtdlv
       61 wsdiwraffa sfaqiflapq wyvgaifllg ilvasrraal vasigsivgi aiawtlgspa
      121 qdiragllgy navlvtlald gvfvmatgwg lafaiigaga stavsgalae tfapigghtl
      181 twpyclttlt fllavpslpr lhrsd
//
LOCUS       WP_235916119             285 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-ACP desaturase [Antrihabitans cavernicola].
ACCESSION   WP_235916119
VERSION     WP_235916119.1
KEYWORDS    RefSeq.
SOURCE      Antrihabitans cavernicola
  ORGANISM  Antrihabitans cavernicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Antrihabitans.
REFERENCE   1  (residues 1 to 285)
  AUTHORS   Liu,Q., Chai,J., Moche,M., Guy,J., Lindqvist,Y. and Shanklin,J.
  TITLE     Half-of-the-Sites Reactivity of the Castor Delta9-18:0-Acyl Carrier
            Protein Desaturase
  JOURNAL   Plant Physiol 169 (1), 432-441 (2015)
   PUBMED   26224800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015370.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03405.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Antrihabitans cavernicola"
                     /db_xref="taxon:2495913"
     Protein         1..285
                     /product="acyl-ACP desaturase"
                     /EC_number="1.14.19.2"
                     /GO_function="GO:0045300 - stearoyl-[ACP] desaturase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=31347
     Region          10..283
                     /region_name="Ferritin_like"
                     /note="Ferritin-like superfamily of diiron-containing
                     four-helix-bundle proteins; cl00264"
                     /db_xref="CDD:469698"
     Site            order(77,107,110,159,189,192)
                     /site_type="other"
                     /note="dinuclear metal binding motif [ion binding]"
                     /db_xref="CDD:153097"
ORIGIN      
        1 mpstelndkd lldalapvvs dnlerhiava dvwqpqdmvp wddgrnfdfl ggtdwapeqs
       61 tlsdigklgl tvgvlaadnm psyhrelagr lvsgpwwrwv grwtaeenrh sivlrdflvl
      121 travdpvele rvrmthmttg yslpslhlle ilataafdea asairhrnta aqcgdkvaaa
      181 iceriatdde lqtkffanli daaldlapeq tvnaiaervr efrvpviplp gdrdstgela
      241 tagiydpare telvfgplia ewniagrtfe pageqsrdel gkltv
//
LOCUS       WP_235916762             247 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Antrihabitans
            cavernicola].
ACCESSION   WP_235916762
VERSION     WP_235916762.1
KEYWORDS    RefSeq.
SOURCE      Antrihabitans cavernicola
  ORGANISM  Antrihabitans cavernicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Antrihabitans.
REFERENCE   1  (residues 1 to 247)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Antrihabitans cavernicola"
                     /db_xref="taxon:2495913"
     Protein         <1..247
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <1..244
                     /region_name="PRK08273"
                     /note="thiamine pyrophosphate protein; Provisional"
                     /db_xref="CDD:181344"
ORIGIN      
        1 rwwkvmaaea aveadpinpm rlfaelssrl pddaivtads gssanwyarq lrfrgnmrgs
       61 lsgnlatmgp gvpygigakf ghpdrpvivf agdgamqmng laelitikhy wqewddprli
      121 itvlhnddln qvtwemrama gapkfaesqt lpdvdyaafa aslglhaitv tdpeklraaw
      181 dfalaadrpt ildvhcdpnv ppvpphatye qmkdtamsvl kgdddawglm kegvkikaqe
      241 flphptq
//
LOCUS       WP_235916797              74 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: sodium/glutamate symporter [Alphaproteobacteria].
ACCESSION   WP_235916797
VERSION     WP_235916797.1
KEYWORDS    RefSeq.
SOURCE      Alphaproteobacteria (a-proteobacteria)
  ORGANISM  Alphaproteobacteria
            Bacteria; Pseudomonadati; Pseudomonadota.
REFERENCE   1  (residues 1 to 74)
  AUTHORS   Kalman,M., Gentry,D.R. and Cashel,M.
  TITLE     Characterization of the Escherichia coli K12 gltS glutamate
            permease gene
  JOURNAL   Mol Gen Genet 225 (3), 379-386 (1991)
   PUBMED   2017136
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015573.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03616.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Alphaproteobacteria"
                     /db_xref="taxon:28211"
     Protein         1..74
                     /product="sodium/glutamate symporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015501 - glutamate:sodium symporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0015813 - L-glutamate transmembrane
                     transport [Evidence IEA]"
                     /calculated_mol_wt=7750
     Region          <7..74
                     /region_name="Glt_symporter"
                     /note="Sodium/glutamate symporter; cl19414"
                     /db_xref="CDD:473169"
ORIGIN      
        1 mllqnalmgr kheaavisaa flgirldsta taianriivt qqygaahrav ivvplvcgff
       61 idivdaliis lfas
//
LOCUS       WP_235916815             248 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Antrihabitans
            cavernicola].
ACCESSION   WP_235916815
VERSION     WP_235916815.1
KEYWORDS    RefSeq.
SOURCE      Antrihabitans cavernicola
  ORGANISM  Antrihabitans cavernicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Antrihabitans.
REFERENCE   1  (residues 1 to 248)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Antrihabitans cavernicola"
                     /db_xref="taxon:2495913"
     Protein         <1..248
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <1..244
                     /region_name="PRK08273"
                     /note="thiamine pyrophosphate protein; Provisional"
                     /db_xref="CDD:181344"
ORIGIN      
        1 rwwkvmaaea aveadpinpm rlfaelssrl pddaivtads gssanwyarq lrfrgnmrgs
       61 lsgnlatmgp gvpygigakf ghpdrpvvvf agdgamqmng laelitikhy wqewddprli
      121 itilhnddln qvtwemrams gapkfaesqt lpdvdyaafa aslglhaitv tdpeqigpaw
      181 dlalaadrpt ildvhcdpnv ppvpphvtye qmkdtamsvl kgdedalgvm kegikikaqe
      241 flphptrw
//
LOCUS       WP_235916849             134 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF1348 family protein [Alphaproteobacteria].
ACCESSION   WP_235916849
VERSION     WP_235916849.1
KEYWORDS    RefSeq.
SOURCE      Alphaproteobacteria (a-proteobacteria)
  ORGANISM  Alphaproteobacteria
            Bacteria; Pseudomonadati; Pseudomonadota.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018748.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07080.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Alphaproteobacteria"
                     /db_xref="taxon:28211"
     Protein         1..134
                     /product="DUF1348 family protein"
                     /calculated_mol_wt=15524
     Region          <33..134
                     /region_name="DUF1348"
                     /note="Protein of unknown function (DUF1348); cl46394"
                     /db_xref="CDD:480734"
ORIGIN      
        1 mgdpcrshlg smknmgggpa plshdrhpad rarphaqafl trkwnrehey rlikelwaft
       61 gnriavryay eyrddngqwf raygnenwef aedglmahrh acinempiae sdrlyhwplg
      121 rrpddhpsls dlgl
//
LOCUS       WP_235916851             130 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: LysR substrate-binding domain-containing protein
            [Alphaproteobacteria].
ACCESSION   WP_235916851
VERSION     WP_235916851.1
KEYWORDS    RefSeq.
SOURCE      Alphaproteobacteria (a-proteobacteria)
  ORGANISM  Alphaproteobacteria
            Bacteria; Pseudomonadati; Pseudomonadota.
REFERENCE   1  (residues 1 to 130)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Alphaproteobacteria"
                     /db_xref="taxon:28211"
     Protein         1..130
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=13906
     Region          <24..130
                     /region_name="PRK11242"
                     /note="DNA-binding transcriptional regulator CynR;
                     Provisional"
                     /db_xref="CDD:183051"
ORIGIN      
        1 mlaekggdde glrqagafgd lgvsaeslvl lsaefatrdq idrfchqhsi qphvrieans
       61 isavieivrr tqlstllpat iafahqdlka itldpvllqr tavlmqrkda yrsaatkafv
      121 alakevaagl
//
LOCUS       WP_235916861             249 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Paenirhizobium
            naphthalenivorans].
ACCESSION   WP_235916861
VERSION     WP_235916861.1
KEYWORDS    RefSeq.
SOURCE      Paenirhizobium naphthalenivorans
  ORGANISM  Paenirhizobium naphthalenivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Paenirhizobium.
REFERENCE   1  (residues 1 to 249)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Paenirhizobium naphthalenivorans"
                     /db_xref="taxon:1118451"
     Protein         <1..>249
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..247
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(52,55,58..59,61..62,65,68..69,72,75..76,79..80,83,
                     86..87,89..90,94,96..97,100,101,104,107,110..111,114,118,
                     121,128,132,135,138..139,142,145..146,149..150,152..153,
                     156..157,170..171,174,177..178,181,184..185,187..188,
                     191..192,195,198..199,202,205..206,208..209,212..213,
                     215..216,219,222..223,226,229..230)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            110..143
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 smverlrgvv adalsasdnv ssgsqelsas seqlsqgate qaasaeeasa smeqmaanik
       61 qnadnaaqte kiarqssrda etsgdavnra vaamrtiaek isivqeiarq tdllalnaav
      121 eaaragehgk gfavvasevr klaersqsaa aeisamstet vqsaqdagem lnrlvpdirk
      181 taelvaeisa acreqdigaa qineaiqqld kvtqqnasas eemsatseel aaqaeelqss
      241 iaffkvdga
//
LOCUS       WP_235916916             165 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphate acyltransferase, partial [Brucella anthropi].
ACCESSION   WP_235916916
VERSION     WP_235916916.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013665.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01515.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..>165
                     /product="phosphate acyltransferase"
                     /GO_function="GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
     Region          4..>165
                     /region_name="Pta"
                     /note="Phosphotransacetylase (includes Pta, EutD and
                     phosphobutyryltransferase) [Energy production and
                     conversion]; COG0280"
                     /db_xref="CDD:440049"
ORIGIN      
        1 mlplekifek arsrprhivl aegedpriid aalraereai aritllgses visrqidgsk
       61 iaiinpvvsg ksadyaqkly rlrqakgmte eqaeamvktp lgfaammvre gdadgtvaga
      121 vattadvvrh alqiigkadg aslvssfflm llcqshhqkk gafvf
//
LOCUS       WP_235917026             175 aa            linear   BCT 02-MAR-2025
DEFINITION  divalent metal cation transporter [Brucella anthropi].
ACCESSION   WP_235917026
VERSION     WP_235917026.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 175)
  AUTHORS   Bozzi,A.T., Zimanyi,C.M., Nicoludis,J.M., Lee,B.K., Zhang,C.H. and
            Gaudet,R.
  TITLE     Structures in multiple conformations reveal distinct transition
            metal and proton pathways in an Nramp transporter
  JOURNAL   Elife 8, e41124 (2019)
   PUBMED   30714568
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 175)
  AUTHORS   Ehrnstorfer,I.A., Geertsma,E.R., Pardon,E., Steyaert,J. and
            Dutzler,R.
  TITLE     Crystal structure of a SLC11 (NRAMP) transporter reveals the basis
            for transition-metal ion transport
  JOURNAL   Nat Struct Mol Biol 21 (11), 990-996 (2014)
   PUBMED   25326704
REFERENCE   3  (residues 1 to 175)
  AUTHORS   Shin,J.H., Wakeman,C.A., Goodson,J.R., Rodionov,D.A.,
            Freedman,B.G., Senger,R.S. and Winkler,W.C.
  TITLE     Transport of magnesium by a bacterial Nramp-related gene
  JOURNAL   PLoS Genet 10 (6), e1004429 (2014)
   PUBMED   24968120
  REMARK    Publication Status: Online-Only
REFERENCE   4  (residues 1 to 175)
  AUTHORS   Govoni,G. and Gros,P.
  TITLE     Macrophage NRAMP1 and its role in resistance to microbial
            infections
  JOURNAL   Inflamm Res 47 (7), 277-284 (1998)
   PUBMED   9719491
REFERENCE   5  (residues 1 to 175)
  AUTHORS   Agranoff,D.D. and Krishna,S.
  TITLE     Metal ion homeostasis and intracellular parasitism
  JOURNAL   Mol Microbiol 28 (3), 403-412 (1998)
   PUBMED   9632246
REFERENCE   6  (residues 1 to 175)
  AUTHORS   Pinner,E., Gruenheid,S., Raymond,M. and Gros,P.
  TITLE     Functional complementation of the yeast divalent cation transporter
            family SMF by NRAMP2, a member of the mammalian natural
            resistance-associated macrophage protein family
  JOURNAL   J Biol Chem 272 (46), 28933-28938 (1997)
   PUBMED   9360964
REFERENCE   7  (residues 1 to 175)
  AUTHORS   Cellier,M., Belouchi,A. and Gros,P.
  TITLE     Resistance to intracellular infections: comparative genomic
            analysis of Nramp
  JOURNAL   Trends Genet 12 (6), 201-204 (1996)
   PUBMED   8928221
REFERENCE   8  (residues 1 to 175)
  AUTHORS   Cellier,M., Prive,G., Belouchi,A., Kwan,T., Rodrigues,V., Chia,W.
            and Gros,P.
  TITLE     Nramp defines a family of membrane proteins
  JOURNAL   Proc Natl Acad Sci U S A 92 (22), 10089-10093 (1995)
   PUBMED   7479731
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013715.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01566.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..175
                     /product="divalent metal cation transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=18949
     Region          1..>158
                     /region_name="Nramp"
                     /note="Natural resistance-associated macrophage protein;
                     pfam01566"
                     /db_xref="CDD:426327"
ORIGIN      
        1 mlfsyplmaa mqgvsagigv vtgqgiaqnl rrhyspwllr gavvllflan finigvdlaa
       61 mgaavrlfag gpeilytlac aalcvtlevm vsyrryasvl kwlalsllty aavvmtvnvp
      121 wyaalqgali prlvfdreha malvavfgtt ispylfflag rysatirmrr lrqsg
//
LOCUS       WP_235917110             115 aa            linear   BCT 02-MAR-2025
DEFINITION  redoxin domain-containing protein [Maritimibacter harenae].
ACCESSION   WP_235917110
VERSION     WP_235917110.1
KEYWORDS    RefSeq.
SOURCE      Maritimibacter harenae
  ORGANISM  Maritimibacter harenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Maritimibacter.
REFERENCE   1  (residues 1 to 115)
  AUTHORS   Chae,H.Z., Robison,K., Poole,L.B., Church,G., Storz,G. and
            Rhee,S.G.
  TITLE     Cloning and sequencing of thiol-specific antioxidant from mammalian
            brain: alkyl hydroperoxide reductase and thiol-specific antioxidant
            define a large family of antioxidant enzymes
  JOURNAL   Proc Natl Acad Sci U S A 91 (15), 7017-7021 (1994)
   PUBMED   8041738
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012787.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00578.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Maritimibacter harenae"
                     /db_xref="taxon:2606218"
     Protein         1..115
                     /product="redoxin domain-containing protein"
                     /GO_function="GO:0016209 - antioxidant activity [Evidence
                     IEA]"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=12663
     Region          17..>81
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 mripqsfrrr vkwlpqigdv fpefhvnstv ghlkfhdwae gswvlllshp aahtavctte
       61 lgsiavnwpe fqalgvkvlg lltcwsdpep stalgeslrt tirvtgwlcp pfssa
//
LOCUS       WP_235916775             239 aa            linear   BCT 02-MAR-2025
DEFINITION  BPL-N domain-containing protein [Antrihabitans cavernicola].
ACCESSION   WP_235916775
VERSION     WP_235916775.1
KEYWORDS    RefSeq.
SOURCE      Antrihabitans cavernicola
  ORGANISM  Antrihabitans cavernicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Antrihabitans.
REFERENCE   1  (residues 1 to 239)
  AUTHORS   Pendini,N.R., Bailey,L.M., Booker,G.W., Wilce,M.C., Wallace,J.C.
            and Polyak,S.W.
  TITLE     Biotin protein ligase from Candida albicans: expression,
            purification and development of a novel assay
  JOURNAL   Arch Biochem Biophys 479 (2), 163-169 (2008)
   PUBMED   18809372
REFERENCE   2  (residues 1 to 239)
  AUTHORS   Cronan,J.E. Jr. and Wallace,J.C.
  TITLE     The gene encoding the biotin-apoprotein ligase of Saccharomyces
            cerevisiae
  JOURNAL   FEMS Microbiol Lett 130 (2-3), 221-229 (1995)
   PUBMED   7649444
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021354.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09825.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Antrihabitans cavernicola"
                     /db_xref="taxon:2495913"
     Protein         1..239
                     /product="BPL-N domain-containing protein"
                     /calculated_mol_wt=25704
     Region          22..212
                     /region_name="COG4285"
                     /note="Uncharacterized conserved protein, conains
                     N-terminal glutamine amidotransferase (GATase1)-like
                     domain [General function prediction only]"
                     /db_xref="CDD:443426"
ORIGIN      
        1 magtevmart eprvrtesgg lalvyrgpaa lpgcpesvae lllashrnfd vgfvgpseer
       61 dltadtlrta tlyaqpggst lrrawramas hredlreyvh sggrylgfcl gaylagrtpg
      121 fgllpgdtdq yirtpgatvd strpaivdvs wrgtpetlyf qdgatvvlde pgenedvdvl
      181 aryrngeiaa lahrfgsgrv avvgphpeat sdwfadsglr dhtdpamrvg fdlidavmr
//
LOCUS       WP_235916297              96 aa            linear   BCT 02-MAR-2025
DEFINITION  YbaB/EbfC family nucleoid-associated protein [Antrihabitans
            cavernicola].
ACCESSION   WP_235916297
VERSION     WP_235916297.1
KEYWORDS    RefSeq.
SOURCE      Antrihabitans cavernicola
  ORGANISM  Antrihabitans cavernicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Antrihabitans.
REFERENCE   1  (residues 1 to 96)
  AUTHORS   Cooley,A.E., Riley,S.P., Kral,K., Miller,M.C., DeMoll,E.,
            Fried,M.G. and Stevenson,B.
  TITLE     DNA-binding by Haemophilus influenzae and Escherichia coli YbaB,
            members of a widely-distributed bacterial protein family
  JOURNAL   BMC Microbiol 9, 137 (2009)
   PUBMED   19594923
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 96)
  AUTHORS   Riley,S.P., Bykowski,T., Cooley,A.E., Burns,L.H., Babb,K.,
            Brissette,C.A., Bowman,A., Rotondi,M., Miller,M.C., DeMoll,E.,
            Lim,K., Fried,M.G. and Stevenson,B.
  TITLE     Borrelia burgdorferi EbfC defines a newly-identified, widespread
            family of bacterial DNA-binding proteins
  JOURNAL   Nucleic Acids Res 37 (6), 1973-1983 (2009)
   PUBMED   19208644
REFERENCE   3  (residues 1 to 96)
  AUTHORS   Lim,K., Tempczyk,A., Parsons,J.F., Bonander,N., Toedt,J.,
            Kelman,Z., Howard,A., Eisenstein,E. and Herzberg,O.
  TITLE     Crystal structure of YbaB from Haemophilus influenzae (HI0442), a
            protein of unknown function coexpressed with the recombinational
            DNA repair protein RecR
  JOURNAL   Proteins 50 (2), 375-379 (2003)
   PUBMED   12486730
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014616.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02575.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Antrihabitans cavernicola"
                     /db_xref="taxon:2495913"
     Protein         1..96
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=10092
ORIGIN      
        1 mdalveaana klehletslg alqqirarfa tkdgavtaev dgngaltglw ldesisemsa
       61 kdvsklitwa shqaaqltgv ergkilesln stfrap
//
LOCUS       WP_235917157             163 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6314 family protein [Maritimibacter harenae].
ACCESSION   WP_235917157
VERSION     WP_235917157.1
KEYWORDS    RefSeq.
SOURCE      Maritimibacter harenae
  ORGANISM  Maritimibacter harenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Maritimibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039724.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19834.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Maritimibacter harenae"
                     /db_xref="taxon:2606218"
     Protein         1..163
                     /product="DUF6314 family protein"
                     /calculated_mol_wt=18352
     Region          32..160
                     /region_name="DUF6314"
                     /note="Family of unknown function (DUF6314); pfam19834"
                     /db_xref="CDD:437666"
ORIGIN      
        1 mrpglsvcrg iagvidsrpd kgkvsmatly dfegrwriar qiddrlagsq grfegivtfa
       61 pdgqgltcre ageltfdgqt pyaatrtylw rqgaegievy fedgrffhli ggdqapvaah
      121 wcdpddyrva ydftlwpdwr avwtvegprk dytmvseymr lap
//
LOCUS       WP_235917191             397 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Maritimibacter
            harenae].
ACCESSION   WP_235917191
VERSION     WP_235917191.1
KEYWORDS    RefSeq.
SOURCE      Maritimibacter harenae
  ORGANISM  Maritimibacter harenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Maritimibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13407.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Maritimibacter harenae"
                     /db_xref="taxon:2606218"
     Protein         1..397
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=42620
     Region          91..340
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 meikirrget emrktlknms aialatmlpl svlaqsgedl mesrlgttda npaivdafer
       61 aarevtpelr ekalecwneg scdtgtggem tvaladgfge nvwrrvtame yvqqaltype
      121 igrilyssar gdaakaisdl rsyvaqgvdv ivifadhgea lgptvreaqe agiqvavygg
      181 tevgtagedy vanvtedice lgaafidaie esnpdaqnvv alggtpgnpl satvqrcate
      241 rteeidglel vaaedtnwtq egtfsatsal lsrfddiday iseyadgfrg alrayesadr
      301 pmdftlsvrt deqglfcewe dsgksfqify asgqnyqsri altaamraaa geavdahvdv
      361 pfamspveeg lcnrelpmev svstlvdeet lkamfgg
//
LOCUS       WP_235917230             385 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Maritimibacter harenae].
ACCESSION   WP_235917230
VERSION     WP_235917230.1
KEYWORDS    RefSeq.
SOURCE      Maritimibacter harenae
  ORGANISM  Maritimibacter harenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Maritimibacter.
REFERENCE   1  (residues 1 to 385)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 385)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 385)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Maritimibacter harenae"
                     /db_xref="taxon:2606218"
     Protein         1..385
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=43264
     Region          9..378
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(94,124,126,157,159,360..362,364,366)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mlkrtiydee heifrksvrs waekevfphs ekwredgcvs reiwkkagde gflcmyadek
       61 ygglgvedfr ydmilveeig treagfflgl hnriagpylq hyasdaqrdk ympgcvsgdt
      121 ilaiamtepg tgsdlagikt ravemedhwv lngsktyisn gflaglviva aktnpeashe
      181 vglflvedgm egfsrgrnlk kmglesqdta elffddvkvp kenvigdpks gfktmmlnla
      241 eerlngavgf varaerafei tmefimerra fgrpigtfqn srfkmasmrt eidaaqalvd
      301 hcvrehlkge lsaelaaeak lytsevegrv vdecvqlhgg agymeeyeis rlyrdarisr
      361 iyagtseimr eiigrglgld errrn
//
LOCUS       WP_235917237             134 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1064 domain-containing protein [Maritimibacter harenae].
ACCESSION   WP_235917237
VERSION     WP_235917237.1
KEYWORDS    RefSeq.
SOURCE      Maritimibacter harenae
  ORGANISM  Maritimibacter harenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Maritimibacter.
REFERENCE   1  (residues 1 to 134)
  AUTHORS   Kinch,L.N., Ginalski,K., Rychlewski,L. and Grishin,N.V.
  TITLE     Identification of novel restriction endonuclease-like fold families
            among hypothetical proteins
  JOURNAL   Nucleic Acids Res 33 (11), 3598-3605 (2005)
   PUBMED   15972856
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018101.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06356.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Maritimibacter harenae"
                     /db_xref="taxon:2606218"
     Protein         1..134
                     /product="DUF1064 domain-containing protein"
                     /calculated_mol_wt=14962
ORIGIN      
        1 maditsmpgr ltaaefqamh hrmraknkfg aerveldgfs fdskrearrw aalkqeqrlg
       61 fitglqrqvs ielkgrdgpl ltpkgrvmry vadfvytdaa tgtqvvedak ghptkefkvk
      121 ravlaamgie irev
//
LOCUS       WP_235917273             258 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Maritimibacter
            harenae].
ACCESSION   WP_235917273
VERSION     WP_235917273.1
KEYWORDS    RefSeq.
SOURCE      Maritimibacter harenae
  ORGANISM  Maritimibacter harenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Maritimibacter.
REFERENCE   1  (residues 1 to 258)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 258)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 258)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 258)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Maritimibacter harenae"
                     /db_xref="taxon:2606218"
     Protein         1..258
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=28069
     Region          3..>249
                     /region_name="MglA"
                     /note="ABC-type sugar transport system, ATPase component
                     [Carbohydrate transport and metabolism]; COG1129"
                     /db_xref="CDD:440745"
ORIGIN      
        1 mstepilsar nlvkrygrvt aidhcdfelm pgeilavigd ngagksslik avsgavipde
       61 gevflegkrv rfnspieare hgietvyqtl amspalsiad nmfmgreirm egilgsvfrr
      121 ldkkkmeeia rqklndlglm tiqninqave tlsggqrqgv avaraaafgs kviildepta
      181 algvkesrkv lelildvrsr gipiilishn mphvfeladr ihvhrlgkrl cvidpkdytm
      241 sdavafmtga kepeavaa
//
LOCUS       WP_235917314             475 aa            linear   BCT 02-MAR-2025
DEFINITION  Mu transposase C-terminal domain-containing protein [Maritimibacter
            harenae].
ACCESSION   WP_235917314
VERSION     WP_235917314.1
KEYWORDS    RefSeq.
SOURCE      Maritimibacter harenae
  ORGANISM  Maritimibacter harenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Maritimibacter.
REFERENCE   1  (residues 1 to 475)
  AUTHORS   Rice,P. and Mizuuchi,K.
  TITLE     Structure of the bacteriophage Mu transposase core: a common
            structural motif for DNA transposition and retroviral integration
  JOURNAL   Cell 82 (2), 209-220 (1995)
   PUBMED   7628012
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020859.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09299.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Maritimibacter harenae"
                     /db_xref="taxon:2606218"
     Protein         1..475
                     /product="Mu transposase C-terminal domain-containing
                     protein"
                     /calculated_mol_wt=54113
     Region          <32..223
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
     Region          <171..285
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
     Region          307..362
                     /region_name="Mu-transpos_C"
                     /note="Mu transposase, C-terminal; pfam09299"
                     /db_xref="CDD:430512"
ORIGIN      
        1 mkpldpavev ivarhfqefy atrrkptktr fwrevaadcr aqglvppsir rlgrwlelkd
       61 qarlqarreg rdraerrhla tpgtltadrs ldivqidhtk advtvvdpvs rhplgrptlt
      121 laidvssrmv vgfhlslepp sllsvalclt havmekshwl aargintdwp aygipkaiyv
      181 dngaefhara feracseyqi nlvhrppgtp rygghierli gtmmgaihll pgshfanife
      241 rgdldaeaea vmtlqeletw laheitgsyh arvhsalett plaaweargs eakprlptdl
      301 rrflvdflps eqrvlqrdgf hlfhirywad elrwmmgrds rkytlkydpr dlsrifvlse
      361 dgpiearpad ltrpaitlwe hraarralre agrrsldeel ifttiqaqrd lvnsaeretk
      421 airrhkarra hlkrgsmidv tpatepsdtl papknagsvl rdhpgfyvee wyddd
//
LOCUS       WP_235917348             312 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2279 domain-containing protein [Hymenobacter busanensis].
ACCESSION   WP_235917348
VERSION     WP_235917348.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter busanensis
  ORGANISM  Hymenobacter busanensis
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021554.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10043.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Hymenobacter busanensis"
                     /db_xref="taxon:2607656"
     Protein         1..312
                     /product="DUF2279 domain-containing protein"
                     /calculated_mol_wt=34444
     Region          82..162
                     /region_name="DUF2279"
                     /note="Predicted periplasmic lipoprotein (DUF2279);
                     cl11574"
                     /db_xref="CDD:448313"
ORIGIN      
        1 mlllgglfgg gftwaqapaa appdtvrpqv apvvgpltkl paepvpphrl plllgglgag
       61 ygglyvalsq gwytgrqvap hwfndfpewk qldkaghfwg afhesrgtvd mlrwagvadk
      121 kaiwygslag fliqspieyf dsrdpaygas atdlaanflg sagvlaqela wrevrimpki
      181 sfhltpyaar rpnvlgstvp erllkdyngq tywlctdvga flpagsrwpr wlqpalgyga
      241 qevvyndpda srqaglrpyr qyylsldvdl rriptrsktl rrvfyalsif hlpapaleln
      301 srrglvahgl yw
//
LOCUS       WP_235917371             397 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Hymenobacter busanensis].
ACCESSION   WP_235917371
VERSION     WP_235917371.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter busanensis
  ORGANISM  Hymenobacter busanensis
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 397)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Hymenobacter busanensis"
                     /db_xref="taxon:2607656"
     Protein         1..397
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=43838
     Region          46..361
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Site            order(52,54,86,128..129,229,310)
                     /site_type="active"
                     /db_xref="CDD:277317"
     Site            order(52,54,86,128,229,310)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277317"
ORIGIN      
        1 mlcallaawl ayrfvqerrl rrrpyiapaw rqqqsasppd tapahriclv gdlgavatdg
       61 rdpvlnllrr wlqevgasgt vvllgdnvyp vglppmghpr redaehrlni qlevlrgfag
      121 pvvflsgnhd wnkgrpdgye ylraqeayvr qhlpqalylp engcpgpval planglvllv
      181 lntqwwvqrg prpfgpahgc aatdtkqpft qladmlaqyh gqrivvaghh plysnamhgg
      241 kftvkqhvfp ltaahkrayv plpligslfp fyrrlvgaae dmahppyrrm rrrlldvlrq
      301 vpgivyaagh dhnlqyflrr gvhyivsgag sktsfvqagg kaafvhehkg fftldyyadg
      361 qlwlhtwepa dtegtraapv fssalpvtap apagsvg
//
LOCUS       WP_235917372             461 aa            linear   BCT 02-MAR-2025
DEFINITION  L,D-transpeptidase family protein [Hymenobacter busanensis].
ACCESSION   WP_235917372
VERSION     WP_235917372.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter busanensis
  ORGANISM  Hymenobacter busanensis
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 461)
  AUTHORS   Biarrotte-Sorin,S., Hugonnet,J.E., Delfosse,V., Mainardi,J.L.,
            Gutmann,L., Arthur,M. and Mayer,C.
  TITLE     Crystal structure of a novel beta-lactam-insensitive peptidoglycan
            transpeptidase
  JOURNAL   J Mol Biol 359 (3), 533-538 (2006)
   PUBMED   16647082
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015679.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03734.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Hymenobacter busanensis"
                     /db_xref="taxon:2607656"
     Protein         1..461
                     /product="L,D-transpeptidase family protein"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=51535
     Region          1..445
                     /region_name="YcbB"
                     /note="Murein L,D-transpeptidase YcbB/YkuD [Cell
                     wall/membrane/envelope biogenesis]; COG2989"
                     /db_xref="CDD:442228"
ORIGIN      
        1 mssvlfgfsp afgqsnaeva avlqrvlvad ssqaelrpvr rfyaalnfap awtspagwlp
       61 lsadalrllt rapefgllpa eyelpallhl tdslqcpgas aatrlvqrvr cellftkall
      121 nlgqhlqkgr laeqpfttgt tvppdpdaan mllrarrsgs vaasllalqp tgrsyvrllw
      181 awqhllrtdt aaarrlrptv ainlerlrwe paadslyvvv nipsytlqvv rgpqvvrsfr
      241 vivgetptpt pelyshirff etspewrvph siavgemlpr lrrnpgylga nnfllydrqg
      301 kvvnprsikw qtvtpetfvy sirqiaccdn algnvvfrfp nphdifvhdt ptrelfnkrs
      361 ralshgcirl ekplqlasfl lrrdygskaq sridlmwdsv ysgygkffpl rnpvpivvry
      421 vtceadgpql rllpdvygrd ealqkrffdv ptasplvsvg n
//
LOCUS       WP_235917378             528 aa            linear   BCT 02-MAR-2025
DEFINITION  SBBP repeat-containing protein [Hymenobacter busanensis].
ACCESSION   WP_235917378
VERSION     WP_235917378.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter busanensis
  ORGANISM  Hymenobacter busanensis
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018449.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06739.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Hymenobacter busanensis"
                     /db_xref="taxon:2607656"
     Protein         1..528
                     /product="SBBP repeat-containing protein"
                     /calculated_mol_wt=54915
     Region          <88..299
                     /region_name="NHL"
                     /note="NHL repeat unit of beta-propeller proteins;
                     cl18310"
                     /db_xref="CDD:302697"
     Region          92..144
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271325"
     Region          152..207
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271325"
     Region          216..274
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271325"
     Region          456..527
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mlmalsaraq gqwdwaqrlp lvntavaagp agrvyvsgsf sglvviggtr yaavgtedgf
       61 igcftsagvl qwsqqlssqp yypqtqpqsa sptdiaadaa gnsyvtgaft grisfpnatv
      121 tapmgwnglf takyspagal qwiraggcps yaskpgaiav daagnsyiag gvtspavfdq
      181 vsksfagkyq vfvasysttg airwlttgsg qsntnlaqdv aadghggvyv vgsyyseltl
      241 gatvlpanss ngtqypnqli aqlrgstgqv vwarwaggpg syvlgegisv ddagntcvag
      301 rysgapafgl gtnglpaass ptayaaayts vgtprwavpl dlttnqgrcr tasaadgsrc
      361 yvlsdrttvs ptpvvlrrlw pasgstqwrl dmrgdahpya ltlapdgylf atgsvsgtay
      421 fgpsmlnaas panffvrvse taarqtataa qnawtaypnp tqnllrvplp epaqatvrda
      481 fgqlrmqtll hpqpdgawln vdrllpgtyv lelrtaggvv hrqwvvke
//
LOCUS       WP_235917386            1039 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 N-terminal domain-containing protein
            [Hymenobacter busanensis].
ACCESSION   WP_235917386
VERSION     WP_235917386.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter busanensis
  ORGANISM  Hymenobacter busanensis
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 1039)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00933.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Hymenobacter busanensis"
                     /db_xref="taxon:2607656"
     Protein         1..1039
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=114507
     Region          74..546
                     /region_name="BglX"
                     /note="Periplasmic beta-glucosidase and related
                     glycosidases [Carbohydrate transport and metabolism];
                     COG1472"
                     /db_xref="CDD:441081"
     Region          605..1003
                     /region_name="AmpC"
                     /note="CubicO group peptidase, beta-lactamase class C
                     family [Defense mechanisms]; COG1680"
                     /db_xref="CDD:441286"
ORIGIN      
        1 mrfpklllll lllfgpllap aqrrparkvp atrpaksava paktsataak paatpppfak
       61 ylnspwvdsv mrtltpdqrv aqlfmvaays nrqridedsv arlvqqygvg gliffqggpv
      121 rqakllnryq aqakvpllva mdaeyglgmr ldstirlpyq mamggirdna liydmgqela
      181 rqfkrigmhv nfapvvdvnn nannpvignr swgenrdnvv aksyqymqgm qdagilavak
      241 hfpghgdtdt dshlalplir vdkrrldtle lvpfrslmqr glggvmiahl nipaldttgt
      301 pstlsepivt glvkkglgye gviftdamnm kgvinkyppg eadvralqag ndilefskni
      361 plalqmvraa idsgqikqad idmrcrkvla lkqwaglnhy rpielrnlyq dlntphglyl
      421 nqhlqelstt llrnqrnllp lqrldtlria avsigtkdtt afqrmvgdya pagyfsvaas
      481 psmdelarlr eqlkgynlll igiqslgrlp atnfnvtaet nvllrelvgl kkrmvvtvfg
      541 dayavakvrd inaadavilg yqegknaqel aaqlifggvg asgklsvtvs pqygygyglt
      601 tqggmrlgya ypeavgmsnt learvdslmn qalaakafpg gevviarrgt vvlrksygtl
      661 sygpgarpvr ntdlydlasv tkvsaalpal mklqdegkfs pdktlgdlfd flkgtnkqdl
      721 kmrdvlthqa rlkawipfwq nytqpkgifa rlfakyphep iksapgevlp msrrffrads
      781 sarfplqagt glwarkdfpe riykaigesp lnekpgyvys dlsfimypyf vqkatgktlg
      841 qfvqdeiyrp lgastlgynp trrfplsria pteydslfrr qqlhgtvhde gaallgglsg
      901 haglfgnand laklvqlyaw ngkyggqqll kpetvqeytk cqfcpdnrra lgfdrpaanp
      961 svnsaknasq qsyghtgftg tyfwvdpmyd ltvvflsnrv nptrrnnkig dlsvrshllq
     1021 laidavqser pkvestvee
//
LOCUS       WP_235917393             127 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF983 domain-containing protein [Hymenobacter busanensis].
ACCESSION   WP_235917393
VERSION     WP_235917393.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter busanensis
  ORGANISM  Hymenobacter busanensis
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017935.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06170.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Hymenobacter busanensis"
                     /db_xref="taxon:2607656"
     Protein         1..127
                     /product="DUF983 domain-containing protein"
                     /calculated_mol_wt=14107
     Region          8..110
                     /region_name="DUF983"
                     /note="Protein of unknown function (DUF983); cl02211"
                     /db_xref="CDD:470495"
ORIGIN      
        1 msaplallrl kcprcrrgrl fthsalnlqh fddmptacpv cglhyepevg fywgamyisy
       61 glsvgvvvlt gilvyflahd pavwvyiaav agvvvlltpv lfryaralml ywfggtcydp
      121 kyagreq
//
LOCUS       WP_235917408             410 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Hymenobacter busanensis].
ACCESSION   WP_235917408
VERSION     WP_235917408.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter busanensis
  ORGANISM  Hymenobacter busanensis
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 410)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 410)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02771.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Hymenobacter busanensis"
                     /db_xref="taxon:2607656"
     Protein         1..410
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=45013
     Region          27..409
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(124,154,156,187,189,387..389,391,393)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mssqadvlsp kakaaqhrgs tnaagftdyy didgllteeh klirqsirdf vkkeispnie
       61 kwaqqahfps eivrkfgevg afgptiptey ggggldyisy glimqeierg dsgmrstasv
      121 qgslvmypiy aygseeqrkk ylpklasgew lgcfgltepd hgsnpggmtt tikdmgdyyl
      181 lngaklwisn spqsqvavvw akndegrirg vivekgmegf tapeihnkws lrasitgelv
      241 fdnvkvpken llpnveglkg plgcldsary giawgaigva idcyesalky slereqfgkp
      301 iasfqlqqkk laemiteitk aqlmvwrlgv lknegkatsa qismakrnsv dmalhiarea
      361 rqihggmgit geypimrhmm nlesvityeg thdihllitg aditgiqafk
//
LOCUS       WP_235917421             365 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA/RNA non-specific endonuclease [Hymenobacter busanensis].
ACCESSION   WP_235917421
VERSION     WP_235917421.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter busanensis
  ORGANISM  Hymenobacter busanensis
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 365)
  AUTHORS   Miller,M.D., Tanner,J., Alpaugh,M., Benedik,M.J. and Krause,K.L.
  TITLE     2.1 A structure of Serratia endonuclease suggests a mechanism for
            binding to double-stranded DNA
  JOURNAL   Nat Struct Biol 1 (7), 461-468 (1994)
   PUBMED   7664065
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013395.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01223.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Hymenobacter busanensis"
                     /db_xref="taxon:2607656"
     Protein         1..365
                     /product="DNA/RNA non-specific endonuclease"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=38389
     Region          <44..102
                     /region_name="CarboxypepD_reg"
                     /note="Carboxypeptidase regulatory-like domain; pfam13620"
                     /db_xref="CDD:433354"
     Region          115..361
                     /region_name="NUC1"
                     /note="DNA/RNA endonuclease G, NUC1 [Nucleotide transport
                     and metabolism]; COG1864"
                     /db_xref="CDD:441469"
ORIGIN      
        1 maflvgsaiw apgcsttsdp tpqpqrqvga vtgtyspaaa ltgvtatpva ggtavaatlq
       61 agtyafadlp tgeytlayaa aagyqtpdpl gvtvrtnatv qvpaltvqpv ppplpehltl
      121 gnpsgatpde qlftnyllyk pqyalsyhrd kgipnwvswh lsrtwlgtap rqddfrpdfd
      181 lpnswyhvpa ngysgsgfdr ghncpsadrt stvadnsatf lmtnmipqap rnnqqtwasl
      241 edycrtlvna gnelyiimgh ygtggtgsng gvtttinggr vtvpkriwkv vvvlpvgdnd
      301 asrvtattrv iavdtpnent vstswggyrt tvdaieqatg ydllsavpas vqasveaqvd
      361 agptq
//
LOCUS       WP_235917432             156 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6970 domain-containing protein [Hymenobacter busanensis].
ACCESSION   WP_235917432
VERSION     WP_235917432.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter busanensis
  ORGANISM  Hymenobacter busanensis
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047150.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22311.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Hymenobacter busanensis"
                     /db_xref="taxon:2607656"
     Protein         1..156
                     /product="DUF6970 domain-containing protein"
                     /calculated_mol_wt=16941
ORIGIN      
        1 mprvftfalg alllagscar hvdlttptdt sepratanps tpapttvptt tpvpdgpqva
       61 fdkrnrpqwl ddkisqhmaa kvanppirim syeyngqtvy fesapccdnf stlydakgvv
      121 lcqpdggitg rgdgncadfe kkrtneqlvw qdprqk
//
LOCUS       WP_235917562             165 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3299 domain-containing protein [Croceibacterium xixiisoli].
ACCESSION   WP_235917562
VERSION     WP_235917562.1
KEYWORDS    RefSeq.
SOURCE      Croceibacterium xixiisoli
  ORGANISM  Croceibacterium xixiisoli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Croceibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023164.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11736.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Croceibacterium xixiisoli"
                     /db_xref="taxon:1476466"
     Protein         1..165
                     /product="DUF3299 domain-containing protein"
                     /calculated_mol_wt=17943
ORIGIN      
        1 mfmrakaiml alfvaamlts pvqaqraagl rpaetvwrpa atppggvswa llesteeitq
       61 ersgliyskp rfpaqvrala grtikvsgym lplqsgarqs hfvllayppd cpfhlnpapd
      121 qfieirvsrp vgvdetsvrt fegklvlsga desgvfykmv egrei
//
LOCUS       WP_235917592             216 aa            linear   BCT 02-MAR-2025
DEFINITION  L,D-transpeptidase family protein [Croceibacterium xixiisoli].
ACCESSION   WP_235917592
VERSION     WP_235917592.1
KEYWORDS    RefSeq.
SOURCE      Croceibacterium xixiisoli
  ORGANISM  Croceibacterium xixiisoli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Croceibacterium.
REFERENCE   1  (residues 1 to 216)
  AUTHORS   Biarrotte-Sorin,S., Hugonnet,J.E., Delfosse,V., Mainardi,J.L.,
            Gutmann,L., Arthur,M. and Mayer,C.
  TITLE     Crystal structure of a novel beta-lactam-insensitive peptidoglycan
            transpeptidase
  JOURNAL   J Mol Biol 359 (3), 533-538 (2006)
   PUBMED   16647082
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015679.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03734.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Croceibacterium xixiisoli"
                     /db_xref="taxon:1476466"
     Protein         1..216
                     /product="L,D-transpeptidase family protein"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=22476
     Region          52..>208
                     /region_name="PRK06132"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:235709"
ORIGIN      
        1 mtkwiggatl gilalllvgv magkamrpse papvelasvd apgapagata eatpspsptt
       61 ddpfvikrvl pitgpikyge whwddegvpd gplvmtvdld arvlsvfrgg yeigatavml
      121 gtdnhptplg vfpilskerh nvsekygdap mpwtlrltwd giaihggsev ergfashgci
      181 gtpnefvsrl faiakkgdkv iitrgqttgv ggslas
//
LOCUS       WP_235917698             283 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease [Croceibacterium xixiisoli].
ACCESSION   WP_235917698
VERSION     WP_235917698.1
KEYWORDS    RefSeq.
SOURCE      Croceibacterium xixiisoli
  ORGANISM  Croceibacterium xixiisoli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Croceibacterium.
REFERENCE   1  (residues 1 to 283)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01061.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Croceibacterium xixiisoli"
                     /db_xref="taxon:1476466"
     Protein         1..283
                     /product="ABC transporter permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=30203
     Region          25..283
                     /region_name="ABC2_membrane"
                     /note="ABC-2 type transporter; cl21474"
                     /db_xref="CDD:473876"
ORIGIN      
        1 mpaehnapar rafpakgapl itginriglw slyrkevrrf mkvqtqtvwa pavttllflv
       61 ifsvamgrsg revlgvpfat faapglimmg mmqnafanss ftlltgklqg tiidvlmppl
      121 ssaelmmgiv aaavtravmv ggavalamll wpgvsvavah pwavvwfglm gsmllalmgl
      181 itsmwaekfd haaavtnfvv aplsllsgtf yvidhlsplf qtisrsnpff ymisgfrfgf
      241 lgesdignsn havigaaigv gvlnlvigli ayrlvktgwk lks
//
LOCUS       WP_235917749             620 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Croceibacterium xixiisoli].
ACCESSION   WP_235917749
VERSION     WP_235917749.1
KEYWORDS    RefSeq.
SOURCE      Croceibacterium xixiisoli
  ORGANISM  Croceibacterium xixiisoli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Croceibacterium.
REFERENCE   1  (residues 1 to 620)
  AUTHORS   Zhang,Y.L., Arakawa,E. and Leung,K.Y.
  TITLE     Novel Aeromonas hydrophila PPD134/91 genes involved in O-antigen
            and capsule biosynthesis
  JOURNAL   Infect Immun 70 (5), 2326-2335 (2002)
   PUBMED   11953367
  REMARK    Erratum:[Infect Immun 2002 Jun;70(6):3308]
REFERENCE   2  (residues 1 to 620)
  AUTHORS   Swartley,J.S., Liu,L.J., Miller,Y.K., Martin,L.E., Edupuganti,S.
            and Stephens,D.S.
  TITLE     Characterization of the gene cassette required for biosynthesis of
            the (alpha1-->6)-linked N-acetyl-D-mannosamine-1-phosphate capsule
            of serogroup A Neisseria meningitidis
  JOURNAL   J Bacteriol 180 (6), 1533-1539 (1998)
   PUBMED   9515923
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025025.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13641.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Croceibacterium xixiisoli"
                     /db_xref="taxon:1476466"
     Protein         1..620
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=68154
     Region          157..399
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
     Site            order(161,163,190,255,257)
                     /site_type="active"
                     /db_xref="CDD:133057"
ORIGIN      
        1 mallislwts ravrsaydir ptsplgllmv aamggaitaa vtgfsavmpp fllflavagc
       61 iwmsarhlsm pgvawmtvdf lgiaiawlwg clfinelflp wgvealalfg ltitlavsil
      121 gameriarea ifthdrwrlp fsaptgqllg tdqpkvsiql pcyaeppevv ketmnrlaal
      181 eyqnfevlvv dnntkdealw rpleqhaevl nrqmgrevfr ffhvsplpga kagalnwlid
      241 nnhmaedtai vavidadyys epdflsrlvp ffdspsvayl qtphdyrdfe ssrylsacys
      301 eympnnkidm lgvheyggaf tigtmcllra nvlrevggwa ewcltedsev svrmraagfr
      361 giylgetfgr glipdtfddy kkqrfrwtag pvqqlrrhwr lflpapwarr mpgwtkmlev
      421 lrciapirtl tglviglagi asiaianatg agakvdvpdi awsliplala ttlvrtwhry
      481 riagimrvad mirgevaraa ltwvvlvagv aglsnkplaw rrtpkfggtd sfagalysaf
      541 petmlglaas aaafgmyllk piiglemtil acsslgflal rffcapymav lalrdaapqt
      601 vlpaipapmk dklpaarqaa
//
LOCUS       WP_235917792             172 aa            linear   BCT 02-MAR-2025
DEFINITION  CAP domain-containing protein [Croceibacterium xixiisoli].
ACCESSION   WP_235917792
VERSION     WP_235917792.1
KEYWORDS    RefSeq.
SOURCE      Croceibacterium xixiisoli
  ORGANISM  Croceibacterium xixiisoli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Croceibacterium.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Gibbs,G.M., Roelants,K. and O'Bryan,M.K.
  TITLE     The CAP superfamily: cysteine-rich secretory proteins, antigen 5,
            and pathogenesis-related 1 proteins--roles in reproduction, cancer,
            and immune defense
  JOURNAL   Endocr Rev 29 (7), 865-897 (2008)
   PUBMED   18824526
REFERENCE   2  (residues 1 to 172)
  AUTHORS   Milne,T.J., Abbenante,G., Tyndall,J.D., Halliday,J. and Lewis,R.J.
  TITLE     Isolation and characterization of a cone snail protease with
            homology to CRISP proteins of the pathogenesis-related protein
            superfamily
  JOURNAL   J Biol Chem 278 (33), 31105-31110 (2003)
   PUBMED   12759345
REFERENCE   3  (residues 1 to 172)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
REFERENCE   4  (residues 1 to 172)
  AUTHORS   Fernandez,C., Szyperski,T., Bruyere,T., Ramage,P., Mosinger,E. and
            Wuthrich,K.
  TITLE     NMR solution structure of the pathogenesis-related protein P14a
  JOURNAL   J Mol Biol 266 (3), 576-593 (1997)
   PUBMED   9067611
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012415.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00188.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Croceibacterium xixiisoli"
                     /db_xref="taxon:1476466"
     Protein         1..172
                     /product="CAP domain-containing protein"
                     /calculated_mol_wt=18043
     Region          26..140
                     /region_name="CAP"
                     /note="CAP (cysteine-rich secretory proteins, antigen 5,
                     and pathogenesis-related 1 proteins) domain family;
                     cl00133"
                     /db_xref="CDD:412178"
ORIGIN      
        1 mailalggag vaahgqaaps dvdvilqahn servgtgvpa ltwnaqlagq aglwaeqlar
       61 dgvlrhasaa ersdagenlw mgspgyfste rmvsafiaek rhyrhgsfpn vsatgnwqdv
      121 ghytqivwrd tqqigcavar taqpicsyag tgrpetgsaa nptetsvdqf pn
//
LOCUS       WP_235917850             102 aa            linear   BCT 02-MAR-2025
DEFINITION  I78 family peptidase inhibitor [Croceibacterium xixiisoli].
ACCESSION   WP_235917850
VERSION     WP_235917850.1
KEYWORDS    RefSeq.
SOURCE      Croceibacterium xixiisoli
  ORGANISM  Croceibacterium xixiisoli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Croceibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023148.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11720.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Croceibacterium xixiisoli"
                     /db_xref="taxon:1476466"
     Protein         1..102
                     /product="I78 family peptidase inhibitor"
                     /calculated_mol_wt=10415
     Region          38..102
                     /region_name="Inhibitor_I78"
                     /note="Peptidase inhibitor I78 family; cl46679"
                     /db_xref="CDD:481019"
ORIGIN      
        1 mrrtkmlagc apflmlalag cattgdagag dggengqcda aagqrfvgsk asadvgqqll
       61 ratgakqlrw gppnsamtmd frqdrltvsy daamtidrvs cg
//
LOCUS       WP_235917953             298 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Paenibacillus
            lutrae].
ACCESSION   WP_235917953
VERSION     WP_235917953.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus lutrae
  ORGANISM  Paenibacillus lutrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 298)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Paenibacillus lutrae"
                     /db_xref="taxon:2078573"
     Protein         1..298
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=31953
     Region          8..296
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(13,15..16,18,37..39,75..77,117..119,134,138,
                     161..164)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(95,119,134,138)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mdvagmtril itgasgftgl aacsyfaslg mevaavvrsa sarvtggtpy vcdltkpedv
       61 srlvheirpd wvlhlagrns vaeswrdpgs flqanlmapv yllealrscp dtrilvagsm
      121 lgtaaagqpi phpygfskml lmyaaqawhl wfsqqimval psnligpgps tgicgllark
      181 iagletgaah eplrlsslge erdyvdvrda vsaykiildq gvpgavysig teqprslgei
      241 vsvfqsltsa slplevenkp rpelvrrmdv talkalgwsa ripfeqslsd aldyyrhv
//
LOCUS       WP_235917955             684 aa            linear   BCT 02-MAR-2025
DEFINITION  PrsW family glutamic-type intramembrane protease [Paenibacillus
            lutrae].
ACCESSION   WP_235917955
VERSION     WP_235917955.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus lutrae
  ORGANISM  Paenibacillus lutrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 684)
  AUTHORS   Pei,J., Mitchell,D.A., Dixon,J.E. and Grishin,N.V.
  TITLE     Expansion of type II CAAX proteases reveals evolutionary origin of
            gamma-secretase subunit APH-1
  JOURNAL   J Mol Biol 410 (1), 18-26 (2011)
   PUBMED   21570408
REFERENCE   2  (residues 1 to 684)
  AUTHORS   Ellermeier,C.D. and Losick,R.
  TITLE     Evidence for a novel protease governing regulated intramembrane
            proteolysis and resistance to antimicrobial peptides in Bacillus
            subtilis
  JOURNAL   Genes Dev 20 (14), 1911-1922 (2006)
   PUBMED   16816000
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024760.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13367.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Paenibacillus lutrae"
                     /db_xref="taxon:2078573"
     Protein         1..684
                     /product="PrsW family glutamic-type intramembrane
                     protease"
                     /EC_number="3.4.-.-"
                     /GO_function="GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /GO_function="GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=74861
     Region          1..236
                     /region_name="PrsW-protease"
                     /note="PrsW family intramembrane metalloprotease; cl23838"
                     /db_xref="CDD:474075"
ORIGIN      
        1 mlfqalaafy viwqlwilar sktlswgayt gflligawii aplntmlvsv ifmpldaaaf
       61 arwnaalvap iteeimklap lllflwisrr atslsltdfa liggatgagf qwaeetlmrl
      121 qanagllnqd easggylvwk llrflpstdq elalswagha aatalcalgi gfairlrrti
      181 gssayalpvf lllwaiadha vhngsqtiwl nglhttlgsg ssmkilfilm fiaaiirdyy
      241 dlnrvrnglt llpdetrlkp sgeiyrsvka flngperyis lirfyrtrrr vaftllygkk
      301 eakrrlgklq drmntlqsla svtgvtllgv lsltavgmti leaaaagagt agtacvsclh
      361 ssgsiwwnsq sgwaklafff gafilscsff pfwstagraf agerttavqs tgdadgvass
      421 ltggidymln hppahaaala lkqgmkrlqq slhrdetagt assmssefee dqrdqmeepl
      481 edngtsstke kenaspapah vlrfttdltr shvhdggitp pesaspfrgk wnfqglhnwa
      541 elihvlerdn ytlltveelp engirrvavq rtadnpvtge iftsvtygkt iypkhytpae
      601 idllgeraln ksilgnrlea itdpkgqllt ylfreevvgp dgkiigvagr vqpdtqgnla
      661 aihshcpynh rksvsfreis stdy
//
LOCUS       WP_235917966             435 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Paenibacillus lutrae].
ACCESSION   WP_235917966
VERSION     WP_235917966.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus lutrae
  ORGANISM  Paenibacillus lutrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12697.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Paenibacillus lutrae"
                     /db_xref="taxon:2078573"
     Protein         1..435
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=47730
     Region          15..163
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(16,18,20,29..31,33..34,53,61,63,65,68,81,83,85,92,
                     94,112..113,115,117,126,128,130,132,142..146,148..149,
                     152..154,157)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176868"
     Region          170..432
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
ORIGIN      
        1 mirkttvrkn rdrreltver nvampvqlaw egwtepkhit kwwgpkgwtt tvyemdvrpg
       61 gvwryslqad dnsgeaafcr atydvveapg klvyvdtfad sdwnivsdse myttvlfeek
      121 sggtrisivt rfasneqldn aeamgmiegf tdaydrledy letlmggknp metviskdgt
      181 qiaytkqgtg psiilissaa adyqdaspla ehlsvnftvy nydrrgrgrs tdtspyetar
      241 evediealia vaggqaylfg sssgavlale aanllgdsva klflyeppfi indsrkpvpn
      301 dyvehlnali kagkrseave yfasealgip geyigymksd pswnkmesla htlaydgiim
      361 gttqsgnplp tgrwnvtipt limtgensep lfhdaahalv ellpraaahs lagqdhsavi
      421 mapevvakai vdser
//
LOCUS       WP_235918014             264 aa            linear   BCT 02-MAR-2025
DEFINITION  adenosylcobinamide amidohydrolase [Paenibacillus lutrae].
ACCESSION   WP_235918014
VERSION     WP_235918014.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus lutrae
  ORGANISM  Paenibacillus lutrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 264)
  AUTHORS   Woodson,J.D. and Escalante-Semerena,J.C.
  TITLE     CbiZ, an amidohydrolase enzyme required for salvaging the coenzyme
            B12 precursor cobinamide in archaea
  JOURNAL   Proc Natl Acad Sci U S A 101 (10), 3591-3596 (2004)
   PUBMED   14990804
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014060.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01955.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Paenibacillus lutrae"
                     /db_xref="taxon:2078573"
     Protein         1..264
                     /product="adenosylcobinamide amidohydrolase"
                     /calculated_mol_wt=27566
     Region          32..252
                     /region_name="CbiZ"
                     /note="Adenosylcobinamide amidohydrolase [Coenzyme
                     transport and metabolism]; COG1865"
                     /db_xref="CDD:441470"
ORIGIN      
        1 maidkqdsae vfryvsepaa altetlrngq gdrylllese qplrtlnsap wgggfgfhsr
       61 linrqvdksy mcedpltemd dflnrseiea ataaclltsv hmsgvgrchm rwretgpars
      121 egsyeagpsg diavsvwvtv gysnkaragr vlapaalfpg tinvivvieg kltdaamvna
      181 vitateakaa alqdlgvame dgsaatgttt davliaatqs grahlyagta tllghmigra
      241 vyeaamesgr iyaqvlagpg sgga
//
LOCUS       WP_235918026             537 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Paenibacillus
            lutrae].
ACCESSION   WP_235918026
VERSION     WP_235918026.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus lutrae
  ORGANISM  Paenibacillus lutrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 537)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 537)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 537)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 537)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Paenibacillus lutrae"
                     /db_xref="taxon:2078573"
     Protein         1..537
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=58390
     Region          1..537
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
ORIGIN      
        1 mstprflrqm aalhprlfwk gvllwlpfnl spviagllmk qvfdnlagsa eeaggtgigt
       61 gigtgmlcml laanilasag silwggriet elnfrikgii rhnmlesilk qpgaralpca
      121 pgeaistfre dveqladmlr fynllpvkvt ftaaaavilw avspeitllv fvpltvilis
      181 aqvagtrlqq lreasrkaes giagfigemc nsaqavklfn aeeavsarfr slgdsrmstv
      241 lkerlldqst safvshtlqi gtglillaaa ifmkqgqfti gnfalfvtyi givtsfiqyc
      301 gffltkyrqt svavqrlrql lpdtpesall eyrqvyteed yppsplagpl savqaerlrv
      361 letrgltclh ghtdqgvrdi slhiaggsfv vitgrmgsgk ttllrailgl lpassgticw
      421 ngrkvenpgs ffippraayt aqaanlynlt lrenillglp enrleraiys avleediqwl
      481 edgadtmigv kgvklsggqi qrtavarmfa rqsdlmvldd vssaldaete srlwerl
//
LOCUS       WP_235918171             306 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3102 domain-containing protein [Paenibacillus lutrae].
ACCESSION   WP_235918171
VERSION     WP_235918171.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus lutrae
  ORGANISM  Paenibacillus lutrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11300.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Paenibacillus lutrae"
                     /db_xref="taxon:2078573"
     Protein         1..306
                     /product="DUF3102 domain-containing protein"
                     /calculated_mol_wt=34967
     Region          15..131
                     /region_name="DUF3102"
                     /note="Protein of unknown function (DUF3102); pfam11300"
                     /db_xref="CDD:402753"
     Region          122..>295
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
ORIGIN      
        1 mneqhmtlpl sadiqvitae insykqiagq siyeigkrlk hvkindlahg ewmrwlneie
       61 mshqtaqkfi qvheqfgnla msrgiptgki femlslpesv drnkflsesh iipttgetkt
      121 vdemtvrelr evkkslkeae rrakeseell estktaadyw kdqaskaqnt pprietvtve
      181 kipddlknei eesrfkiknl qagyqeavqk lkefelretv dfdeeqaalq rkklmheadl
      241 ttihlrihik qflekaavgt fmqgaiahsn dlekkqlsqs lemlesyvsq lkaalngrkl
      301 ggiine
//
LOCUS       WP_235918254             112 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4183 domain-containing protein [Paenibacillus lutrae].
ACCESSION   WP_235918254
VERSION     WP_235918254.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus lutrae
  ORGANISM  Paenibacillus lutrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025171.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13799.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Paenibacillus lutrae"
                     /db_xref="taxon:2078573"
     Protein         1..112
                     /product="DUF4183 domain-containing protein"
                     /calculated_mol_wt=12621
     Region          25..87
                     /region_name="DUF4183"
                     /note="Domain of unknown function (DUF4183); pfam13799"
                     /db_xref="CDD:404653"
ORIGIN      
        1 mrakkpgtkt crplrvmkar atlfvtfsdg ikrsfrnrdq dpsygkirip ssrsvsytnl
       61 fvngvlqpss vykvslgklt llqpgdsrer rsdyppirfn igwqlplplp qv
//
LOCUS       WP_235918276             224 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1129 family protein [Paenibacillus lutrae].
ACCESSION   WP_235918276
VERSION     WP_235918276.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus lutrae
  ORGANISM  Paenibacillus lutrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06570.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Paenibacillus lutrae"
                     /db_xref="taxon:2078573"
     Protein         1..224
                     /product="DUF1129 family protein"
                     /calculated_mol_wt=25133
     Region          8..221
                     /region_name="DUF1129"
                     /note="Protein of unknown function (DUF1129); cl11555"
                     /db_xref="CDD:472220"
ORIGIN      
        1 msapmnirem iahntklqkq lntknkkyyg dmivyirssg iddrrgeell lelllhliqa
       61 qkegrsaqdv fgsdpsgycr elvsqlprpk mvdrlsmlvm ipwiavtwlf laeglmglll
      121 lvtstpdgys nqmslafllg laltslllvk lvmllmnrta ftehnrkfyv lflllyivsi
      181 aavvaagffl ksylpvfsvs pwaafvifav gyagqkywlr sgak
//
LOCUS       WP_235918299             780 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein [Paenibacillus lutrae].
ACCESSION   WP_235918299
VERSION     WP_235918299.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus lutrae
  ORGANISM  Paenibacillus lutrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 780)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Paenibacillus lutrae"
                     /db_xref="taxon:2078573"
     Protein         1..780
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=86517
     Region          54..670
                     /region_name="UvrD"
                     /note="Superfamily I DNA or RNA helicase [Replication,
                     recombination and repair]; COG0210"
                     /db_xref="CDD:439980"
     Region          <728..776
                     /region_name="YdjO"
                     /note="Cold-inducible protein YdjO; pfam14169"
                     /db_xref="CDD:372943"
ORIGIN      
        1 mdthvqpvrq tppgaaekav pqaplasaqt tvqlvgpgee daayfrqles rgtelnepql
       61 ravrhftgpl ltiagagsgk tsvlicrtgh llsvrkvqar nillvtfssk aaaemrsria
      121 klpgiterdi sqleartfhs fflqiirrqg isleifnepr rqhillkqlm relgtpeayp
      181 petllallss ykinrmalrd lpegtsheka vrsiliryes wmqangkmdf ddvlliaynv
      241 lrensellrm lqnrfeyvmv defqdtnglq yelirmiaep qgnlmvvgdd dqtiytfnga
      301 rsefildfek mypgakvitl dinyrstasi vglgnqiirr nvkrrpkklk atkageavpg
      361 ylrpksaede aeavirhiqg eveqkrreyg dfavlfrsas scralleqlv lrnipyidyg
      421 dgqllyqhgl ikpimdylrl svnrrdfeam egilptmylg rekamahirr qeavqpkkgp
      481 lihlmtmpdc kdyhkekire klelirdltp mkpaaaikli rkrfydayve tdekqavtqh
      541 kemlkemlde lessaarfdt ipefvefvne iaakttmgrq erspeqgsri slmtihrskg
      601 lefpvvfvig avdgslphss aldaeapdka aaleeerrla yvavtraree lfvsspasfr
      661 grqaavsrfv lgafaapsaa gtepaakrpa aaaaaragrt svtirtaaaa rhipaassaa
      721 ggssqaatet vaawicgagg cpawsritgp aeaeppaksc plckspmsrg srevpvrqsk
//
LOCUS       WP_235918332             107 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5665 domain-containing protein [Paenibacillus lutrae].
ACCESSION   WP_235918332
VERSION     WP_235918332.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus lutrae
  ORGANISM  Paenibacillus lutrae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040137.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18910.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Paenibacillus lutrae"
                     /db_xref="taxon:2078573"
     Protein         1..107
                     /product="DUF5665 domain-containing protein"
                     /calculated_mol_wt=11795
     Region          49..104
                     /region_name="DUF5665"
                     /note="Domain of unknown function (DUF5665); pfam18910"
                     /db_xref="CDD:436823"
ORIGIN      
        1 mspptrkhpv pgevpipsqe pskkelaler lattlersey kdlienylnp rkriitnfta
       61 glarglglti gttvviallg wlvsqfvsmp iigefiakiv syvdmyk
//
LOCUS       WP_235918374             559 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: IS66 family transposase [Brucella].
ACCESSION   WP_235918374
VERSION     WP_235918374.1
KEYWORDS    RefSeq.
SOURCE      Brucella
  ORGANISM  Brucella
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group.
REFERENCE   1  (residues 1 to 559)
  AUTHORS   Schwedock,J. and Long,S.R.
  TITLE     An open reading frame downstream of Rhizobium meliloti nodQ1 shows
            nucleotide sequence similarity to an Agrobacterium tumefaciens
            insertion sequence
  JOURNAL   Mol Plant Microbe Interact 7 (1), 151-153 (1994)
   PUBMED   8167368
REFERENCE   2  (residues 1 to 559)
  AUTHORS   Machida,Y., Sakurai,M., Kiyokawa,S., Ubasawa,A., Suzuki,Y. and
            Ikeda,J.E.
  TITLE     Nucleotide sequence of the insertion sequence found in the T-DNA
            region of mutant Ti plasmid pTiA66 and distribution of its
            homologues in octopine Ti plasmid
  JOURNAL   Proc Natl Acad Sci U S A 81 (23), 7495-7499 (1984)
   PUBMED   6095299
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015038.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03050.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Brucella"
                     /db_xref="taxon:234"
     Protein         1..559
                     /product="IS66 family transposase"
                     /calculated_mol_wt=62892
     Region          27..79
                     /region_name="ZapB"
                     /note="Cell division protein ZapB; pfam06005"
                     /db_xref="CDD:428718"
     Region          102..539
                     /region_name="transpos_IS66"
                     /note="IS66 family transposase; NF033517"
                     /db_xref="CDD:468053"
ORIGIN      
        1 mpkrmlpspk hadtlslnal rslvtglvek teraearlek leaentalrk enaelrlent
       61 rlkvenqllr deiarlknlp prppfkpsgm dkatdakaqd kqagkkkprg pkldvervdr
      121 dvvlharvpd gsrfkgyksy yvrdivlrag vihyrrecwv apngktilap lpagivggyg
      181 pnlrrlclml haqgqvtaqr lstllndigm diskrqvvrl ltkgldgfva edaavlhagl
      241 vseayvtvdd tgarhardnf ytthiggehf tvfrttktks rlnflsllrg nyqdyvlnda
      301 tsdylktrhg vdptviarlq trtpqrfsnq vpflehlaqk gvdifdkdmv rvvaeagiwg
      361 svrhhgllgn aviisddagq frvgnhalcw vhaerllqkl mpatpqhvrw venirdliws
      421 fykalkafrq kspspgsisa frqrfdrifs irtgcmeldk llarllrrke ellkvlerpe
      481 iplhtnasen dlrscvtkrk isggtmsndg riardtmlgl mktckklrls fwhylgdrlg
      541 issqqtaipe lagliiaka
//
LOCUS       WP_235918410             301 aa            linear   BCT 02-MAR-2025
DEFINITION  OmpA family protein [Sediminibacterium soli].
ACCESSION   WP_235918410
VERSION     WP_235918410.1
KEYWORDS    RefSeq.
SOURCE      Sediminibacterium soli
  ORGANISM  Sediminibacterium soli
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Sediminibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012894.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00691.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Sediminibacterium soli"
                     /db_xref="taxon:2698829"
     Protein         1..301
                     /product="OmpA family protein"
                     /calculated_mol_wt=33359
     Region          24..281
                     /region_name="PRK09039"
                     /note="peptidoglycan -binding protein"
                     /db_xref="CDD:181619"
     Region          <156..292
                     /region_name="MotB"
                     /note="Flagellar motor protein MotB [Cell motility];
                     COG1360"
                     /db_xref="CDD:440971"
ORIGIN      
        1 mkmkaklyll aaaipfvlfs cvstkkldae kakyaelsgn yldqqarlre aqdeikrlqa
       61 lldkangqlr dqkasseati adlnkqidyl kqnnntvlnq lkdlsvvtga qaesikksld
      121 nigakdlyik dlqgsiarkd slnmalvmnl kgaignlddk dinikvdkgv vyvdisdkll
      181 fksgsydvtd rakevlgkva kvlnnqpeie fmveghtdsv piksagiqdn wdlsvkratt
      241 vvrilqdtyg vdpkrmtaag rsqylpladn atiegrsvnr rtrivilpql dqffklletk
      301 k
//
LOCUS       WP_235918488             403 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Sediminibacterium soli].
ACCESSION   WP_235918488
VERSION     WP_235918488.1
KEYWORDS    RefSeq.
SOURCE      Sediminibacterium soli
  ORGANISM  Sediminibacterium soli
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Sediminibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Sediminibacterium soli"
                     /db_xref="taxon:2698829"
     Protein         1..403
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=43380
     Region          17..395
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(27..28,31..32,35,68,118..119,121..123,126,146,
                     149..150,153,227,230..231,234..236,239,266,270,323..324,
                     331,335,350,353..354,357..358,361)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mkqarhpyls mskteyicls aaimmltalg idimlpalga lrihfglrpd stataniivf
       61 ffmgqvaqlv fgilsdrfgr lrvlrigfpl yilggvaaay aptlllmcaa rfiagvgasa
      121 vftttiagvr drfagdqmar tlsliftifl ftpiaapfvg iallsaaswr vvfltpplfg
      181 llvffwsfrl teshpaekrt rlraisiqqa lrqvignrtf mryttittll fsglsvyvsg
      241 sermvgelyg rpglfawifa aiglvmslsa lfnarlaaky gaaksvryll laytvvsall
      301 lmitcidgdp pgmfvfftci galmainlai epnssalale plgetagiaa svygtifffa
      361 gsligaligq lmvhsvmplv isfflfgitg talawgdggr rnh
//
LOCUS       WP_235918503             517 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma 54-interacting transcriptional regulator [Sediminibacterium
            soli].
ACCESSION   WP_235918503
VERSION     WP_235918503.1
KEYWORDS    RefSeq.
SOURCE      Sediminibacterium soli
  ORGANISM  Sediminibacterium soli
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Sediminibacterium.
REFERENCE   1  (residues 1 to 517)
  AUTHORS   Studholme,D.J. and Dixon,R.
  TITLE     Domain architectures of sigma54-dependent transcriptional
            activators
  JOURNAL   J Bacteriol 185 (6), 1757-1767 (2003)
   PUBMED   12618438
REFERENCE   2  (residues 1 to 517)
  AUTHORS   Chaney,M., Grande,R., Wigneshweraraj,S.R., Cannon,W., Casaz,P.,
            Gallegos,M.T., Schumacher,J., Jones,S., Elderkin,S., Dago,A.E.,
            Morett,E. and Buck,M.
  TITLE     Binding of transcriptional activators to sigma 54 in the presence
            of the transition state analog ADP-aluminum fluoride: insights into
            activator mechanochemical action
  JOURNAL   Genes Dev 15 (17), 2282-2294 (2001)
   PUBMED   11544185
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00158.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Sediminibacterium soli"
                     /db_xref="taxon:2698829"
     Protein         1..517
                     /product="sigma 54-interacting transcriptional regulator"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008134 - transcription factor binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=58692
     Region          42..>270
                     /region_name="ChlI"
                     /note="Mg-chelatase subunit ChlI [Coenzyme transport and
                     metabolism]; COG1239"
                     /db_xref="CDD:440852"
ORIGIN      
        1 mtmniqdikt lgslkqsgyr srlvkeeire nliksirdre npftgilgye etvipdtera
       61 llsrhnilfl glrgqaktrm arqmvdllde yipviagsev nddplnplsk fakdqiaehg
      121 detpvqwlhr serygeklat pdvsvadlig didpikaanl klsfadekvi hygiiprsnr
      181 gifvinelpd lqariqvalf nilqegdiqi rgfklrmpld ilfvftanpe dytnrgsivt
      241 plkdriesqi lthypkdidt slaiteqead ilevqkekvl vsdlvkrlie qvafearnne
      301 yvdrksgvsa rltiaafena vssaerraii hrekqtqvwi sdlsgiipai tgkielvyeg
      361 eqegpyqvav nlvdkairsl fvqyfpnpds lkkkrssgkr saeekepenp yktitrwfdq
      421 gnhldlmvdm kdedkiaaly kvnglygfvk qyfpqtneke nallmefvlh glssyslisk
      481 kiigpriefk dlmgsmmnlg dmniggdedt fneddyr
//
LOCUS       WP_235918595             801 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 2 TIM barrel-domain containing protein
            [Sediminibacterium soli].
ACCESSION   WP_235918595
VERSION     WP_235918595.1
KEYWORDS    RefSeq.
SOURCE      Sediminibacterium soli
  ORGANISM  Sediminibacterium soli
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Sediminibacterium.
REFERENCE   1  (residues 1 to 801)
  AUTHORS   Jacobson,R.H., Zhang,X.J., DuBose,R.F. and Matthews,B.W.
  TITLE     Three-dimensional structure of beta-galactosidase from E. coli
  JOURNAL   Nature 369 (6483), 761-766 (1994)
   PUBMED   8008071
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02836.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Sediminibacterium soli"
                     /db_xref="taxon:2698829"
     Protein         1..801
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=89155
     Region          28..790
                     /region_name="GalB"
                     /note="beta-galactosidase GalB; NF041463"
                     /db_xref="CDD:469351"
ORIGIN      
        1 mmtryswylf flllslgaga qprtvlgfns dwkfqlgdds amagpgyndt rwrrlvlphd
       61 wsiesdfska ypatnqggal pggigwyrks fvlpqsangr qvsiefdgvy rnsevwingi
      121 llgkrpngyl sfaydltpyl kpapgentla vrvdnsaqpn srwysgsgiy rsvqlvitgk
      181 tfverggsyi ttpavsaqqa tvhiettikt idtgkqqvsv vhsiydpagr lvkrgrnipv
      241 taagltateq lllhqplrwh tdrpalyrlk tqvfrsaklv detltsfgir sfrfdpakgf
      301 flngqpqkik gvcmhhdlgi lgaafneaaa qrqlrllkam gcnairtahn ppasewldlc
      361 drmgflvmde afdmwqkrkn kfdyhldfke watrdiaemv lrdrnhpsvf swsigneire
      421 qfdssgiala rdlaaavkrl dttrpvvsal tetdpgknfi yrsgaldllg fnyklydyat
      481 lpgkfpgqni iaaetvsala trgvydqpsd smrvwppdak pftagkadmt vsaydhvyay
      541 wgatheqsli aanrypfisg sfvwsgfdfl gepvpyawpa rsayygiidl agfpkdvyyl
      601 yqsqwtrtpv lhifphwnwq pgqmvdvway ynqadevelf lngrslgkqh ttpgklhvmw
      661 rvpfepgtlk avsrkagktv lvkeistagr parielaadk iykprdgnnl vyitaritds
      721 sgntvpgadn tirfsvtgda riagsdngyq adssslqkpv rkawkglvla lvritgkkgn
      781 stltatspgl piayitlkan r
//
LOCUS       WP_235918600             748 aa            linear   BCT 02-MAR-2025
DEFINITION  TIM barrel protein [Sediminibacterium soli].
ACCESSION   WP_235918600
VERSION     WP_235918600.1
KEYWORDS    RefSeq.
SOURCE      Sediminibacterium soli
  ORGANISM  Sediminibacterium soli
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Sediminibacterium.
REFERENCE   1  (residues 1 to 748)
  AUTHORS   Fry,J., Wood,M. and Poole,P.S.
  TITLE     Investigation of myo-inositol catabolism in Rhizobium leguminosarum
            bv. viciae and its effect on nodulation competitiveness
  JOURNAL   Mol Plant Microbe Interact 14 (8), 1016-1025 (2001)
   PUBMED   11497462
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013429.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01261.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Sediminibacterium soli"
                     /db_xref="taxon:2698829"
     Protein         1..748
                     /product="TIM barrel protein"
                     /calculated_mol_wt=84098
     Region          191..427
                     /region_name="DAP2"
                     /note="Dipeptidyl aminopeptidase/acylaminoacyl peptidase
                     [Amino acid transport and metabolism]; COG1506"
                     /db_xref="CDD:441115"
     Region          488..746
                     /region_name="YcjR"
                     /note="Sugar phosphate isomerase/epimerase [Carbohydrate
                     transport and metabolism]; COG1082"
                     /db_xref="CDD:440699"
ORIGIN      
        1 mrrlkgdtpg aglrrikkcv rlllvmfvvh gsagaqlnsd nqyarplkev laeiqqkygv
       61 airyadsmvv nkwvkyaswr yrtdvdqtld niltpldmka rkeqekkykl gyyeyyrwnv
      121 qegwaeldri asqyktlaqw errknelkpc lrkalqltyl palpaaapir tekrtydgyt
      181 venlaleilp gvwingslyk pavytgripv ilnpdghwek qryradcqyr caalakmgam
      241 afsydlfawg esqlqfrled hrrslamtiq algsirlldy llslpdadts rvaitggsga
      301 gshavlmtal ddrikasapv vslssyfygg cpcesgmdih acggrtdnve laamaaprpq
      361 lvvsdggdwt drmpehdfpy lqkmygwygk kdnisnvhlp qekhdfgisk rsavyrfmaa
      421 hlrlnlgais dsrgtinets itiepeknly vfgdkgerlp ahaihgfdkl eklfaaevrk
      481 aappqryrvg lidlmllkrq kpgaitlaaq lgadgievdm gglgnrvsfd nqlltdsvra
      541 kflqlakdng veifslamtg yyaqsfcnrt eyiqsikdcl samrlmqvkt aflplgvqcd
      601 lvknpevrds vvarlklagg maaaagvvig ietsleakee vkllreigsp airiyfnfsn
      661 plkagrdlte elkilgkdri cmihatnkds vwlendpqld lykvkqtlde mswsgwlvie
      721 rsrdakrptd tkynyganta ylkrvfqe
//
LOCUS       WP_235918660             311 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Brucella anthropi].
ACCESSION   WP_235918660
VERSION     WP_235918660.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13407.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..311
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=34442
     Region          <7..53
                     /region_name="HTH_XRE"
                     /note="Helix-turn-helix XRE-family like proteins.
                     Prokaryotic DNA binding proteins belonging to the
                     xenobiotic response element family of transcriptional
                     regulators; cl22854"
                     /db_xref="CDD:473980"
     Region          43..306
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mngswenrri tkttadrirv iaselgyttn lqarglrisn sgmigmilpm ldnryfssma
       61 asfetvarsr nlipvvastl rdpqqerstv etliahnvda lliagatdpd svaelcekvh
      121 lkhinvdlpg khgasvisdn ydgarvlthq iasrrshrte nsfyfiggvd sdhntrarvr
      181 gykdelaaln fpvhsdaiit ngygpdaaar tirdiynkln glpealfvns tspfegvvsf
      241 lktlpvdevr ecsigcfdwd pfievlhfpv vmvrqnvqam ierafellde pvqtnnlpem
      301 ipteliiprg l
//
LOCUS       WP_235918740             154 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF4306 domain-containing protein [Priestia].
ACCESSION   WP_235918740
VERSION     WP_235918740.1
KEYWORDS    RefSeq.
SOURCE      Priestia
  ORGANISM  Priestia
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025519.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14154.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Priestia"
                     /db_xref="taxon:2800373"
     Protein         1..154
                     /product="DUF4306 domain-containing protein"
                     /calculated_mol_wt=16910
     Region          6..83
                     /region_name="DUF4306"
                     /note="Domain of unknown function (DUF4306); pfam14154"
                     /db_xref="CDD:316659"
ORIGIN      
        1 msikcmtqlf ascfvfllss vatwcngssm legplsaslt ggltkssavh hyshidylly
       61 tikfhpqfpi mmmvsgiyli vllsiigfkk ryglissccl citallcyss yklshtpteg
      121 ehamitssla aaslclavgl fyllkrfysq keyi
//
LOCUS       WP_235918790             576 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-ribbon domain-containing protein [Priestia megaterium].
ACCESSION   WP_235918790
VERSION     WP_235918790.1
KEYWORDS    RefSeq.
SOURCE      Priestia megaterium (Bacillus megaterium)
  ORGANISM  Priestia megaterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025669.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14311.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Priestia megaterium"
                     /db_xref="taxon:1404"
     Protein         1..576
                     /product="zinc-ribbon domain-containing protein"
                     /calculated_mol_wt=67000
     Region          16..69
                     /region_name="DUF4379"
                     /note="Probable Zinc-ribbon domain; pfam14311"
                     /db_xref="CDD:433861"
     Region          87..140
                     /region_name="DUF4379"
                     /note="Probable Zinc-ribbon domain; pfam14311"
                     /db_xref="CDD:433861"
     Region          158..210
                     /region_name="DUF4379"
                     /note="Probable Zinc-ribbon domain; pfam14311"
                     /db_xref="CDD:433861"
     Region          228..279
                     /region_name="DUF4379"
                     /note="Probable Zinc-ribbon domain; pfam14311"
                     /db_xref="CDD:433861"
     Region          284..>353
                     /region_name="PDDEXK_nuclease-like"
                     /note="PDDEXK family nucleases; cl40440"
                     /db_xref="CDD:477358"
     Region          440..491
                     /region_name="DUF4379"
                     /note="Probable Zinc-ribbon domain; pfam14311"
                     /db_xref="CDD:433861"
     Region          509..562
                     /region_name="DUF4379"
                     /note="Probable Zinc-ribbon domain; pfam14311"
                     /db_xref="CDD:433861"
ORIGIN      
        1 mkkalkksly dahyklslew hdtkngdlrp ndvapssnrr vwwkcekghe wetsicnrir
       61 ikggncpyct nkrvcgdncl atlrpeiake whptkngllt pydvvmgssk kvwwkcekgh
      121 ewetkvcnrt rkkgagchyc cgqkvlfens ivithpellr dwhalknani kpsnisygsd
      181 kkvwwkcekg hewearvsgr tmknsgcpyc sgrnatgenc laavypeiak ewhptknkll
      241 tpydvtpksg skvwwrceeg hewratihqr gegtncprck vrtsfpeqai fhfiqkrlnn
      301 tisqhvtdeg vefdifnsel sfaveydgyh whkprykqdi eksdyarkkg iflvrvrekg
      361 lkevspnftm niftevfvqn dsgfselnrv isqilkvise knnlspkkms idterqkyki
      421 iegskkiklv nsiafqyphl akewhptknk kskpehfqkg ahvkvwwqch kghewesfiy
      481 srtvgvgcpy canrrvcidn clatlrpeia kewhptkngs ltpydvvigt ykevwwrcek
      541 ghewetkvcn rtsktgtgcp ccyrrnrlvk vkkink
//
LOCUS       WP_235918473             147 aa            linear   BCT 02-MAR-2025
DEFINITION  YqaE/Pmp3 family membrane protein [Sediminibacterium soli].
ACCESSION   WP_235918473
VERSION     WP_235918473.1
KEYWORDS    RefSeq.
SOURCE      Sediminibacterium soli
  ORGANISM  Sediminibacterium soli
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Sediminibacterium.
REFERENCE   1  (residues 1 to 147)
  AUTHORS   Wang,L.Y. and Shiozaki,K.
  TITLE     The fission yeast stress MAPK cascade regulates the pmp3+ gene that
            encodes a highly conserved plasma membrane protein
  JOURNAL   FEBS Lett 580 (10), 2409-2413 (2006)
   PUBMED   16603158
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013814.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01679.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Sediminibacterium soli"
                     /db_xref="taxon:2698829"
     Protein         1..147
                     /product="YqaE/Pmp3 family membrane protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=15806
     Region          <108..145
                     /region_name="Pmp3"
                     /note="Proteolipid membrane potential modulator; cl00431"
                     /db_xref="CDD:469769"
ORIGIN      
        1 mknftllffa liscfglnas svvseptdkt vagtkvtgek elvldnaavt damrefkslr
       61 rtdrkariaq akavlkefka qkkaareaaa pepstntvll vilaillppl avalheggin
      121 gkfwlslllt llfwipgviy alivvls
//
LOCUS       WP_235918828              58 aa            linear   BCT 02-MAR-2025
DEFINITION  alanine:cation symporter family protein, partial [Priestia
            megaterium].
ACCESSION   WP_235918828
VERSION     WP_235918828.1
KEYWORDS    RefSeq.
SOURCE      Priestia megaterium (Bacillus megaterium)
  ORGANISM  Priestia megaterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013406.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01235.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..58
                     /organism="Priestia megaterium"
                     /db_xref="taxon:1404"
     Protein         1..>58
                     /product="alanine:cation symporter family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA]"
                     /GO_function="GO:0015655 - alanine:sodium symporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /GO_process="GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /GO_process="GO:0032328 - alanine transport [Evidence
                     IEA]"
     Region          <1..54
                     /region_name="Na_Ala_symp"
                     /note="Sodium:alanine symporter family; cl00548"
                     /db_xref="CDD:469815"
ORIGIN      
        1 mmvlgcicei evvwelaevf mgfmvvvnlm givvlwkvgf ggvkdyvgek kggkegvl
//
LOCUS       WP_235918852              45 aa            linear   BCT 02-MAR-2025
DEFINITION  GRP family sugar transporter [Priestia megaterium].
ACCESSION   WP_235918852
VERSION     WP_235918852.1
KEYWORDS    RefSeq.
SOURCE      Priestia megaterium (Bacillus megaterium)
  ORGANISM  Priestia megaterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
REFERENCE   1  (residues 1 to 45)
  AUTHORS   Fiegler,H., Bassias,J., Jankovic,I. and Bruckner,R.
  TITLE     Identification of a gene in Staphylococcus xylosus encoding a novel
            glucose uptake protein
  JOURNAL   J Bacteriol 181 (16), 4929-4936 (1999)
   PUBMED   10438764
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018506.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06800.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..45
                     /organism="Priestia megaterium"
                     /db_xref="taxon:1404"
     Protein         1..45
                     /product="GRP family sugar transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015144 - carbohydrate transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0034219 - carbohydrate transmembrane
                     transport [Evidence IEA]"
                     /calculated_mol_wt=4973
     Region          <1..19
                     /region_name="GRP"
                     /note="glucose/ribose porter family; cl41789"
                     /db_xref="CDD:455134"
ORIGIN      
        1 mrivistlrg ifllpenktn phlisitipi lliilralfl pipkt
//
LOCUS       WP_235919027             158 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Aureimonas psammosilenae].
ACCESSION   WP_235919027
VERSION     WP_235919027.1
KEYWORDS    RefSeq.
SOURCE      Aureimonas psammosilenae
  ORGANISM  Aureimonas psammosilenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Aureimonas.
REFERENCE   1  (residues 1 to 158)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Aureimonas psammosilenae"
                     /db_xref="taxon:2495496"
     Protein         1..158
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=16859
     Region          45..150
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(133..136,138)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381122"
ORIGIN      
        1 mrhdpgkwse eakrsaigep qrtalradnf haakaaqpsf agrsilvved eymlaqelgn
       61 eltrvggfav gpvpsveeal glietkaldg aildvnlgde kaypiadrlr qrsvpfifat
      121 gyeagaipaa ydnvprvmkp vdmsllagll fnqptaal
//
LOCUS       WP_235919024             861 aa            linear   BCT 02-MAR-2025
DEFINITION  HWE histidine kinase domain-containing protein [Aureimonas
            psammosilenae].
ACCESSION   WP_235919024
VERSION     WP_235919024.1
KEYWORDS    RefSeq.
SOURCE      Aureimonas psammosilenae
  ORGANISM  Aureimonas psammosilenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Aureimonas.
REFERENCE   1  (residues 1 to 861)
  AUTHORS   Herrou,J., Crosson,S. and Fiebig,A.
  TITLE     Structure and function of HWE/HisKA2-family sensor histidine
            kinases
  JOURNAL   Curr Opin Microbiol 36, 47-54 (2017)
   PUBMED   28193573
REFERENCE   2  (residues 1 to 861)
  AUTHORS   Karniol,B. and Vierstra,R.D.
  TITLE     The HWE histidine kinases, a new family of bacterial two-component
            sensor kinases with potentially diverse roles in environmental
            signaling
  JOURNAL   J Bacteriol 186 (2), 445-453 (2004)
   PUBMED   14702314
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019174.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07536.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Aureimonas psammosilenae"
                     /db_xref="taxon:2495496"
     Protein         1..861
                     /product="HWE histidine kinase domain-containing protein"
                     /GO_function="GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=93939
     Region          17..114
                     /region_name="PAS_2"
                     /note="PAS fold; pfam08446"
                     /db_xref="CDD:400652"
     Region          148..312
                     /region_name="GAF"
                     /note="Domain present in phytochromes and cGMP-specific
                     phosphodiesterases; smart00065"
                     /db_xref="CDD:214500"
     Region          257..698
                     /region_name="COG3920"
                     /note="Two-component sensor histidine kinase, HisKA and
                     HATPase domains [Signal transduction mechanisms]"
                     /db_xref="CDD:443125"
     Region          326..505
                     /region_name="PHY"
                     /note="Phytochrome region; pfam00360"
                     /db_xref="CDD:425635"
     Region          750..859
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(838..841,843)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381122"
ORIGIN      
        1 maaetlspde pvdlsncdre pihllggiqp fgflvavsmd wmvqhvssni geyldvdpdn
       61 vlgeplsavf pasaihsirg rlqvlashdg serlfgcdll gqnsffdvav hvsgssiiie
      121 aepaeaekai npnalvksmv ariqktetld qifresvrql rgitgfdrvm lyrfadggag
      181 eviaesvrtg repflglnyp atdipaqars lyirnqtrii advhavpvpv lpqldpygqp
      241 ldlslsllrs vspihieylk nmgvaasfsi sividgklwg lfalhhyasr hlsmelraat
      301 elfgqmvsfi iegriykerr maeesvrelh drligkivat tnsmealadf adelrqiiac
      361 dglvvwskge ahvsgrvpta delpgiarfl nraaasrvya sselsavydk avdfadrgag
      421 vlaipisrsp rdyilffrre lvqtvnwagd pkaakevvqg pngarltprk sfeawqetvr
      481 gksrpwtetd lkaaealrvs ileillrfne eserqqslat qrqelliael nhrvrnilsl
      541 mraivaqskp gantvdgfar iiggriqala rahdqitsdn asatlladii etevsayiaa
      601 kasrvrlsgp kvfveakafs tlalvfhemv tnsakygals dstgsidvtw eideneacai
      661 swrehggppv qpptrrgfgs tiiqrsiphd lhgeanvrya lrgleadfll ppqvfhldrt
      721 skrrtqdtaf dvaealpvae apslsglnal vvednmlisl daeqmlvsgg vanvflvgsv
      781 aearktlaee hvdfalldvn lgtetsfpll gnlierripf vfatgygeqi dlppeagtar
      841 aikkpfsaea llgavqeala r
//
LOCUS       WP_235919094             225 aa            linear   BCT 02-MAR-2025
DEFINITION  HAD hydrolase-like protein [Aureimonas psammosilenae].
ACCESSION   WP_235919094
VERSION     WP_235919094.1
KEYWORDS    RefSeq.
SOURCE      Aureimonas psammosilenae
  ORGANISM  Aureimonas psammosilenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Aureimonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024811.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13419.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Aureimonas psammosilenae"
                     /db_xref="taxon:2495496"
     Protein         1..225
                     /product="HAD hydrolase-like protein"
                     /calculated_mol_wt=23953
     Region          4..215
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     Site            order(7..11,111..112,144,168..169,172..173)
                     /site_type="active"
                     /db_xref="CDD:319763"
ORIGIN      
        1 malavfdldg tlvdtapdlc aslnaclsfa gmpaidldvv rphaghgarv mlakayerqn
       61 rplpateade qlarflghye ahiadtsrpf pgavaamdrl tedgfklaic tnkteklarl
      121 lmealglagr faaicgadtf tarkpdpihl lgtiarvgfg rrdavmigdt stdtdaaqaa
      181 rvpsilvdfg yapderarre asavisgfte ldaalcrrli rsmpd
//
LOCUS       WP_235919108             239 aa            linear   BCT 02-MAR-2025
DEFINITION  ribonuclease T2 family protein [Aureimonas psammosilenae].
ACCESSION   WP_235919108
VERSION     WP_235919108.1
KEYWORDS    RefSeq.
SOURCE      Aureimonas psammosilenae
  ORGANISM  Aureimonas psammosilenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Aureimonas.
REFERENCE   1  (residues 1 to 239)
  AUTHORS   Kurihara,H., Nonaka,T., Mitsui,Y., Ohgi,K., Irie,M. and
            Nakamura,K.T.
  TITLE     The crystal structure of ribonuclease Rh from Rhizopus niveus at
            2.0 A resolution
  JOURNAL   J Mol Biol 255 (2), 310-320 (1996)
   PUBMED   8551522
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012659.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00445.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Aureimonas psammosilenae"
                     /db_xref="taxon:2495496"
     Protein         1..239
                     /product="ribonuclease T2 family protein"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0033897 - ribonuclease T2 activity
                     [Evidence IEA]"
                     /calculated_mol_wt=25373
     Region          1..238
                     /region_name="RnaI"
                     /note="Ribonuclease I [Translation, ribosomal structure
                     and biogenesis]; COG3719"
                     /db_xref="CDD:442933"
ORIGIN      
        1 mrhflfclva lslavvaada eerrgpsvrn vlaiswqpaf cegqpgrpec rsqtdarada
       61 srfslhglwp qprsrqycge aaglkgqkws elpapalsna vrgrleaamp gtqsgldrhe
      121 warhgscygg tadeyygesi alldainasp vgalfaakrg gevsteeira afdqafgkga
      181 gervrvscrq dggrrlvdel tiglvgdigp qpdlpklila srptkpgcpd givdpaglq
//
LOCUS       WP_235919135             431 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Aureimonas psammosilenae].
ACCESSION   WP_235919135
VERSION     WP_235919135.1
KEYWORDS    RefSeq.
SOURCE      Aureimonas psammosilenae
  ORGANISM  Aureimonas psammosilenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Aureimonas.
REFERENCE   1  (residues 1 to 431)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 431)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 431)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 431)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Aureimonas psammosilenae"
                     /db_xref="taxon:2495496"
     Protein         1..431
                     /product="ATP-binding protein"
                     /calculated_mol_wt=48318
     Region          <162..430
                     /region_name="envZ"
                     /note="osmolarity sensor protein; Provisional; PRK09467"
                     /db_xref="CDD:236531"
ORIGIN      
        1 mpkglyarsl iiiiapmvlm qsvvvylfme rhwqlvtqrl stavvqdiaa tidlieafpq
       61 penfaliqri andrlelsvk ilpptplpap rrsdifnild gilsdeirdq igrpfwidta
      121 seskvvevri qlpdrvlqvf arrnsayasn thifivwmva sslvllliai lflrnqirpi
      181 qalaaaadsf grgqaaptdf rpsgasevrr aslafiqmrd rierqieqrt qmlngvshdl
      241 rtiltrfrlq lefmedsedk relqrdveem qrmlegylaf ardeqgedvg eldlehmlar
      301 leadaerkgk sltseveidp liavrpdsft rlvtnlvsna lrhgqhvavl arregrwlti
      361 tveddgpgip adkreevfkp fvrldtarni daggtglgls iardvarshg gdillsdsam
      421 gglralvrip a
//
LOCUS       WP_235919165              83 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1902 domain-containing protein [Aureimonas psammosilenae].
ACCESSION   WP_235919165
VERSION     WP_235919165.1
KEYWORDS    RefSeq.
SOURCE      Aureimonas psammosilenae
  ORGANISM  Aureimonas psammosilenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Aureimonas.
REFERENCE   1  (residues 1 to 83)
  AUTHORS   Hattori,M., Mizohata,E., Manzoku,M., Bessho,Y., Murayama,K.,
            Terada,T., Kuramitsu,S., Shirouzu,M. and Yokoyama,S.
  TITLE     Crystal structure of the hypothetical protein TTHA1013 from Thermus
            thermophilus HB8
  JOURNAL   Proteins 61 (4), 1117-1120 (2005)
   PUBMED   16250002
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020542.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08972.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Aureimonas psammosilenae"
                     /db_xref="taxon:2495496"
     Protein         1..83
                     /product="DUF1902 domain-containing protein"
                     /calculated_mol_wt=8545
     Region          9..75
                     /region_name="DUF1902"
                     /note="Domain of unknown function (DUF1902); pfam08972"
                     /db_xref="CDD:312506"
ORIGIN      
        1 manalrptif tvsaiwdaea qvwsgscdal paaadaetld gllakveama adlladnhpd
       61 vdpasvyfqm talremdapl aaa
//
LOCUS       WP_235919217             162 aa            linear   BCT 02-MAR-2025
DEFINITION  Lrp/AsnC ligand binding domain-containing protein [Aureimonas
            psammosilenae].
ACCESSION   WP_235919217
VERSION     WP_235919217.1
KEYWORDS    RefSeq.
SOURCE      Aureimonas psammosilenae
  ORGANISM  Aureimonas psammosilenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Aureimonas.
REFERENCE   1  (residues 1 to 162)
  AUTHORS   Ren,J., Sainsbury,S., Combs,S.E., Capper,R.G., Jordan,P.W.,
            Berrow,N.S., Stammers,D.K., Saunders,N.J. and Owens,R.J.
  TITLE     The structure and transcriptional analysis of a global regulator
            from Neisseria meningitidis
  JOURNAL   J Biol Chem 282 (19), 14655-14664 (2007)
   PUBMED   17374605
REFERENCE   2  (residues 1 to 162)
  AUTHORS   Kyrpides,N.C. and Ouzounis,C.A.
  TITLE     The eubacterial transcriptional activator Lrp is present in the
            archaeon Pyrococcus furiosus
  JOURNAL   Trends Biochem Sci 20 (4), 140-141 (1995)
   PUBMED   7770911
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013224.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01037.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Aureimonas psammosilenae"
                     /db_xref="taxon:2495496"
     Protein         1..162
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /calculated_mol_wt=18114
     Region          8..153
                     /region_name="PRK11169"
                     /note="leucine-responsive transcriptional regulator Lrp"
                     /db_xref="CDD:183009"
ORIGIN      
        1 mdrpntsdld qfdlkileil ardgrisvtd laakvglskt pcqirfkrlv kdgyiegfra
       61 vlnpakldld hvafaevklt htheealgsf naavkkirev eechmiasrf dyllkirtpd
      121 irryrrvlge listlpyvas tstnvvmevv kesgddarsr ga
//
LOCUS       WP_235918872             497 aa            linear   BCT 02-MAR-2025
DEFINITION  polymer-forming cytoskeletal protein [Heliomicrobium undosum].
ACCESSION   WP_235918872
VERSION     WP_235918872.1
KEYWORDS    RefSeq.
SOURCE      Heliomicrobium undosum
  ORGANISM  Heliomicrobium undosum
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Heliobacteriaceae; Heliomicrobium.
REFERENCE   1  (residues 1 to 497)
  AUTHORS   Kuhn,J., Briegel,A., Morschel,E., Kahnt,J., Leser,K., Wick,S.,
            Jensen,G.J. and Thanbichler,M.
  TITLE     Bactofilins, a ubiquitous class of cytoskeletal proteins mediating
            polar localization of a cell wall synthase in Caulobacter
            crescentus
  JOURNAL   EMBO J 29 (2), 327-339 (2010)
   PUBMED   19959992
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016408.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04519.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Heliomicrobium undosum"
                     /db_xref="taxon:121734"
     Protein         1..497
                     /product="polymer-forming cytoskeletal protein"
                     /calculated_mol_wt=53343
     Region          <158..240
                     /region_name="CcmA"
                     /note="Cytoskeletal protein CcmA, bactofilin family
                     [Cytoskeleton]; COG1664"
                     /db_xref="CDD:441270"
     Region          343..>448
                     /region_name="TauE"
                     /note="Sulfite exporter TauE/SafE; cl46157"
                     /db_xref="CDD:480497"
ORIGIN      
        1 mrrlwsilkw lllvifliga galagiaasq twqhgvpwns ryetasppwn agpgldrdsa
       61 rvdamnlptl hvrrgeqrds iqepasrvvv eggqvigpvs arevrledra vvngavsaey
      121 gvtivgaqar advtarevri frdsvqeenr rfgqvrrhfd gpeaevagnv kaqhvtnapg
      181 tiisgsvitd gqaelagvvn gdvtarnvil kataqikgni rsgadtivme pgaqvfgrit
      241 gpegqgvriv agavtpedaa aldrsygppl tprsdnspqv vvreqggfay giffwipvli
      301 gllalsfiay sflredaeea adaillqplr niwigfltil algplvalsa vtiigipvav
      361 glavtalaaa ivgwtagslv vgrrvamnlg rwqvpgvige vligafllah lgwvpligwl
      421 illaitlmgf gavvrswypr frdqwrrwrk erkqqreqqd rkesgsaked stagdeaare
      481 asgdvdevev nasaqke
//
LOCUS       WP_235919219              37 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2474 family protein [Aureimonas psammosilenae].
ACCESSION   WP_235919219
VERSION     WP_235919219.1
KEYWORDS    RefSeq.
SOURCE      Aureimonas psammosilenae
  ORGANISM  Aureimonas psammosilenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Aureimonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022085.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10617.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..37
                     /organism="Aureimonas psammosilenae"
                     /db_xref="taxon:2495496"
     Protein         1..37
                     /product="DUF2474 family protein"
                     /calculated_mol_wt=3977
ORIGIN      
        1 mkqpslaarl gwmaliwlas ilalgavsmv irlwlkv
//
LOCUS       WP_235919252             357 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Aureimonas psammosilenae].
ACCESSION   WP_235919252
VERSION     WP_235919252.1
KEYWORDS    RefSeq.
SOURCE      Aureimonas psammosilenae
  ORGANISM  Aureimonas psammosilenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Aureimonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024118.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12706.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Aureimonas psammosilenae"
                     /db_xref="taxon:2495496"
     Protein         1..357
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=39833
     Region          75..256
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(128,130,132..133,203..204,224)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 mkpfrnpyfs gppsdhfdgh rffnpggemp anlgsilrwq fsggrekwap rvdhsvprdk
       61 ppaavsgdal rvlaighasf lyqtgglnil vdpifsercp srlgpqrhne pgvafddlpd
      121 ihvvcvthsh ydhmdretle rlqdrfaprf vvplgcdvll qswrkdasvs ahdwfdrvsl
      181 ndhvavtldp thhwsargvl drrmtlwasf vfetpaglvy higdtgffgg rnyraarery
      241 gppklavipi gayaprsvmr pqhqdpdeav rgalflgaef slgshwgtfq ltdeevgdpp
      301 krlqaalgrw nlsferfraa ppgfvtelpm ridapmppel hetpetvapt vhepaps
//
LOCUS       WP_235919277             962 aa            linear   BCT 02-MAR-2025
DEFINITION  4Fe-4S dicluster domain-containing protein [Aureimonas
            psammosilenae].
ACCESSION   WP_235919277
VERSION     WP_235919277.1
KEYWORDS    RefSeq.
SOURCE      Aureimonas psammosilenae
  ORGANISM  Aureimonas psammosilenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Aureimonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024247.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12838.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..962
                     /organism="Aureimonas psammosilenae"
                     /db_xref="taxon:2495496"
     Protein         1..962
                     /product="4Fe-4S dicluster domain-containing protein"
                     /calculated_mol_wt=102737
     Region          22..514
                     /region_name="Molybdopterin-Binding"
                     /note="Molybdopterin-Binding (MopB) domain of the MopB
                     superfamily of proteins, a large, diverse, heterogeneous
                     superfamily of enzymes that, in general, bind
                     molybdopterin as a cofactor. The MopB domain is found in a
                     wide variety of molybdenum- and...; cl09928"
                     /db_xref="CDD:447860"
     Site            order(105,179,181..183,219..220,222,225..226,256..258,278,
                     322,384..386,410..412,415,427..428,433)
                     /site_type="other"
                     /note="molybdopterin cofactor binding site"
                     /db_xref="CDD:239165"
     Region          533..668
                     /region_name="MopB_CT_PHLH"
                     /note="The MopB_CT_PHLH CD includes a group of related
                     uncharacterized putative hydrogenase-like homologs (PHLH)
                     of molybdopterin binding proteins. This CD is of the PHLH
                     region homologous to the conserved molybdopterin-binding
                     C-terminal (MopB_CT) region...; cd02784"
                     /db_xref="CDD:239185"
     Region          722..946
                     /region_name="PsrB"
                     /note="polysulfide reductase beta (PsrB) subunit; cd10551"
                     /db_xref="CDD:319873"
     Site            order(726..732,734,736..738,740..742,759..760,763..768,
                     776,778,793..798,812..819,822..828,830..832,865..866,
                     875..876,902..907,925,934,936..937)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:319873"
     Site            order(729..732,734..735,739,743,761..762,764,780,782..786,
                     789,791,795..796,800,808,815..821,825..827,829..830,867,
                     869..873,898..900,903..904,906,908..909)
                     /site_type="other"
                     /note="Fe-S cluster binding site [ion binding]"
                     /db_xref="CDD:319873"
ORIGIN      
        1 mnapfsplad pldtmasapl nrrealrllg valaagvagc kpaedivplv tnptglpage
       61 plafatslpl ggygrgalgi svegrpikvs gnalhpaslg atdlfaeaei lglydpdrsr
      121 tllkdgaisn weallaelrp rraafarngg eglgvltgri tsptllrqia elrqafpqlr
      181 hyrheplgdd naragslaaf grrldvlphl tradvvlclg adplgpgpaq irnakgfsar
      241 rrvrgdnram qrlyvvesas tltghaadhr lalsparlrd faaslaarfg agegerpnvd
      301 agflgavead lkaagrqalv lvgeeqppei halgfwlnhq lgnfgttldl iesvdpveeg
      361 hgasigalaa diekgqvdtl fvldcnpvyd gpgdldfsgl lrrvpfalhl glyrdetays
      421 crwhvpeshp leawgdirav dgtagivqpl irplyatrta sellaalggn etpdprailr
      481 etwaraqvla rddfenwwlr tveagvvegs aspavpppra psapvisage sgegvallih
      541 adptiydgrf nnnawlqecp kpgthltwgn alrigekdaa rlgiaagdav riehqgrhle
      601 apvlldkgma egavalslgy grektgaigi glgsnayalr radalwvlsg vslsrvgtse
      661 plpltqfhlt eegrdlapem tladlaggkr lrpsddppps fyggqvyekt dpgetgrhaw
      721 amvidtgaci gcnacviacq sennvpvvgp deiranrsmh wlridsyekp edenrtvfqp
      781 vpcmhcekap cepvcpvgas vhdheglnvq vynrcigtrf cqancpykvr rfnffgyaag
      841 qeyanlgaep lqarfnpdvt vrgrgvmekc tycvqriaga rqkaegqgrp madgevvtac
      901 aaacpteair fgdlavegsg vrtlrgepqh yalleevgtr prttylakvr ntnpalegeg
      961 el
//
LOCUS       WP_235919365             448 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Aureimonas psammosilenae].
ACCESSION   WP_235919365
VERSION     WP_235919365.1
KEYWORDS    RefSeq.
SOURCE      Aureimonas psammosilenae
  ORGANISM  Aureimonas psammosilenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Aureimonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Aureimonas psammosilenae"
                     /db_xref="taxon:2495496"
     Protein         1..448
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47620
     Region          29..431
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(40..41,44..45,48,87,145..146,148..150,153,173,
                     176..177,180,263,266..267,270..272,275,303,307,358..359,
                     363,367,383,386..387,390..391,394)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mhpaanstpl erdarllsar ehkispgeia igvvigrtse ffdffvyaia svlvfpslvf
       61 pyvdaatgtl ysfalfalaf varpfgslif mavdrrhgrg tkltialfll ggstmamafl
      121 pgysqigsga aillalfrig qglalggvwd glpsllamna paekrgwyam ipqlgaplgl
      181 ivaaglfsff lvtlsqedfl dwgwrypffv afainavalf arlrlvatle fqrlfesgel
      241 lpisvletlr aqgrtvllga fvplassalf hlvtvfplsf vtlfrdgspv rflaiemaga
      301 avgllaiias gmladrigrr kllsvsatli gafslfaprl laqgqggeti ymilgfallg
      361 lafgqssgav asafpkrfry tgaaitsdla wligagfapl aalflstnfg lwsvgaylfs
      421 gaactlvalf tsrrsairni eesdalnp
//
LOCUS       WP_235919409             418 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4167 domain-containing protein [Aureimonas psammosilenae].
ACCESSION   WP_235919409
VERSION     WP_235919409.1
KEYWORDS    RefSeq.
SOURCE      Aureimonas psammosilenae
  ORGANISM  Aureimonas psammosilenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Aureimonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025137.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13763.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Aureimonas psammosilenae"
                     /db_xref="taxon:2495496"
     Protein         1..418
                     /product="DUF4167 domain-containing protein"
                     /calculated_mol_wt=46605
     Region          12..>240
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     Region          12..80
                     /region_name="DUF4167"
                     /note="Domain of unknown function (DUF4167); pfam13763"
                     /db_xref="CDD:433458"
ORIGIN      
        1 mrpgqqnkqr mrgrgrkgpn pmsrsyesng pdvkirgtaq hvaekyiala rdanasgdrv
       61 maenylqhae hygrivaaaq gifqlqreep dvmdgeyedg ddegfvegva ttnghpypvp
      121 ervqggdrqq pmqgrdnrdy qnrdgnrdgq nnrdnnrdgq nnrdgqnnre greqrfdrnr
      181 nrdrdfnrdn qnrdgqnrdg qnregqnrdg qnrdrnrdfn rqngeerrsy egrerqnwqd
      241 rqvpnglgpq pnvgesshed arpvaaygen eavaenrste rryedaasta pvteqesgfg
      301 qapatqdavs apegsiytee taaevreprr rgrprrplfg eseigsdeap amdtsaaapv
      361 tapveapsve pvaadpveaa gdapvkrrpg rprkkkvedg taegeeshlp dfllasng
//
LOCUS       WP_235919458              66 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3830 family protein [Aureimonas psammosilenae].
ACCESSION   WP_235919458
VERSION     WP_235919458.1
KEYWORDS    RefSeq.
SOURCE      Aureimonas psammosilenae
  ORGANISM  Aureimonas psammosilenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Aureimonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12903.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Aureimonas psammosilenae"
                     /db_xref="taxon:2495496"
     Protein         1..66
                     /product="DUF3830 family protein"
                     /calculated_mol_wt=6863
     Region          <1..62
                     /region_name="Cyclophil_like"
                     /note="Cyclophilin-like; cl42004"
                     /db_xref="CDD:477900"
ORIGIN      
        1 milypgnvse aeillasgpv afasqagpla gnhfltvtdg ldrladldrg ilwtsakair
       61 lrrdsa
//
LOCUS       WP_235919462             438 aa            linear   BCT 02-MAR-2025
DEFINITION  adenylate/guanylate cyclase domain-containing protein [Aureimonas
            psammosilenae].
ACCESSION   WP_235919462
VERSION     WP_235919462.1
KEYWORDS    RefSeq.
SOURCE      Aureimonas psammosilenae
  ORGANISM  Aureimonas psammosilenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Aureimonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00211.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Aureimonas psammosilenae"
                     /db_xref="taxon:2495496"
     Protein         1..438
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /GO_process="GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA]"
                     /GO_process="GO:0035556 - intracellular signal
                     transduction [Evidence IEA]"
                     /calculated_mol_wt=46430
     Region          203..>328
                     /region_name="Nucleotidyl_cyc_III"
                     /note="Class III nucleotidyl cyclases; cl11967"
                     /db_xref="CDD:448371"
     Site            order(210..215,260)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143637"
     Site            order(210,260)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143637"
ORIGIN      
        1 mrflnlhyra vhrilrrcea vlvdfhnqrl hsvvtkpygs kamrlrrava iaqlvidvls
       61 rtgedsdhpa arvrvgidsg lalavsngrr ghreplflge panhaakrsg ggkgtgiylt
      121 hnargalayp kvadpdsapl tadeiercre aaglgvsadd ivrewradle anpiggfefs
      181 ghtppfgnld fetlsarnsr rqdaasvyad idgftdyvsr svvsdtaakh vvralhvlrs
      241 eldavlhadf ggrkvrfvgd cvhgllaegt arstdaeetv tnmtlcaaam rssfelalgk
      301 laavgtdats lglaigfeyg pitatrlgmk gdlvrcsvsr gvlgseaeqr rcggdetaig
      361 qraykaaanp vrelfgtsrk lsglrydpaa palagkgdrv akasvalasg llkpaaaaad
      421 pftfrnrpag pakrdgfa
//
LOCUS       WP_235919505             267 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Aureimonas
            psammosilenae].
ACCESSION   WP_235919505
VERSION     WP_235919505.1
KEYWORDS    RefSeq.
SOURCE      Aureimonas psammosilenae
  ORGANISM  Aureimonas psammosilenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Aureimonas.
REFERENCE   1  (residues 1 to 267)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 267)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 267)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 267)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Aureimonas psammosilenae"
                     /db_xref="taxon:2495496"
     Protein         1..267
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=28417
     Region          5..>263
                     /region_name="MglA"
                     /note="ABC-type sugar transport system, ATPase component
                     [Carbohydrate transport and metabolism]; COG1129"
                     /db_xref="CDD:440745"
ORIGIN      
        1 msmnppdrvr mtgitkrygp iqtlhdvslh lapgevlglv gdngagkstl skvlsgavvp
       61 dsgtieidgq pvafatpada raahvemvyq dlslcdtvdv agniflgrep vkslggvkll
      121 dkkrmhdear amlerlgivi adtrlkvenl sggqrqsiai graasfdpkv limdeptaal
      181 avaeveavld lirtvsargv svilithrlq dlflvcdriq vmyegrnvae rrvaetdiee
      241 vvnlivgrkf aarsarhggs paegasl
//
LOCUS       WP_235919574             147 aa            linear   BCT 02-MAR-2025
DEFINITION  DinB family protein [Heliomicrobium undosum].
ACCESSION   WP_235919574
VERSION     WP_235919574.1
KEYWORDS    RefSeq.
SOURCE      Heliomicrobium undosum
  ORGANISM  Heliomicrobium undosum
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Heliobacteriaceae; Heliomicrobium.
REFERENCE   1  (residues 1 to 147)
  AUTHORS   Cheo,D.L., Bayles,K.W. and Yasbin,R.E.
  TITLE     Cloning and characterization of DNA damage-inducible promoter
            regions from Bacillus subtilis
  JOURNAL   J Bacteriol 173 (5), 1696-1703 (1991)
   PUBMED   1847907
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017015.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05163.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Heliomicrobium undosum"
                     /db_xref="taxon:121734"
     Protein         1..147
                     /product="DinB family protein"
                     /calculated_mol_wt=16174
     Region          4..139
                     /region_name="MDMPI_N"
                     /note="Mycothiol maleylpyruvate isomerase N-terminal
                     domain; cl21506"
                     /db_xref="CDD:473890"
ORIGIN      
        1 mmdaltdesl qqavtaqdrt lgrmawhiva tipemlertg lslevnides tvpasarqia
       61 dgyrqaaeal aaaverhwsd anlqeekely pgerwtngft lgvlirhqsh hrgqmtvlmr
      121 qagltvpgvy gpsreewsgy gmeapsv
//
LOCUS       WP_235919673              36 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Heliomicrobium undosum].
ACCESSION   WP_235919673
VERSION     WP_235919673.1
KEYWORDS    RefSeq.
SOURCE      Heliomicrobium undosum
  ORGANISM  Heliomicrobium undosum
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Heliobacteriaceae; Heliomicrobium.
REFERENCE   1  (residues 1 to 36)
  AUTHORS   Yeo,C.C. and Poh,C.L.
  TITLE     Characterization of IS1474, an insertion sequence of the IS21
            family isolated from Pseudomonas alcaligenes NCIB 9867
  JOURNAL   FEMS Microbiol Lett 149 (2), 257-263 (1997)
   PUBMED   9141667
REFERENCE   2  (residues 1 to 36)
  AUTHORS   Solinas,F., Marconi,A.M., Ruzzi,M. and Zennaro,E.
  TITLE     Characterization and sequence of a novel insertion sequence,
            IS1162, from Pseudomonas fluorescens
  JOURNAL   Gene 155 (1), 77-82 (1995)
   PUBMED   7698671
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01695.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..36
                     /organism="Heliomicrobium undosum"
                     /db_xref="taxon:121734"
     Protein         <1..36
                     /product="ATP-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <3..29
                     /region_name="IS21_help_AAA"
                     /note="IS21-like element helper ATPase IstB; NF038214"
                     /db_xref="CDD:439516"
ORIGIN      
        1 trltaalvdr lvhhahiltf agesyrlrha lstkkn
//
LOCUS       WP_235919720             189 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: replication initiator protein A [Clostridium].
ACCESSION   WP_235919720
VERSION     WP_235919720.1
KEYWORDS    RefSeq.
SOURCE      Clostridium
  ORGANISM  Clostridium
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae.
REFERENCE   1  (residues 1 to 189)
  AUTHORS   Diaz-Lopez,T., Lages-Gonzalo,M., Serrano-Lopez,A., Alfonso,C.,
            Rivas,G., Diaz-Orejas,R. and Giraldo,R.
  TITLE     Structural changes in RepA, a plasmid replication initiator, upon
            binding to origin DNA
  JOURNAL   J Biol Chem 278 (20), 18606-18616 (2003)
   PUBMED   12637554
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018653.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06970.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Clostridium"
                     /db_xref="taxon:1485"
     Protein         1..189
                     /product="replication initiator protein A"
                     /calculated_mol_wt=21760
     Region          17..92
                     /region_name="HTH_ARSR"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; cl46857"
                     /db_xref="CDD:481197"
ORIGIN      
        1 mqelqfayfr gleaeqysfy rvpkvlfiae cfkslsceak vlcglmlgrm slsiknrwld
       61 dddkvyiifa veeimelmnc ktqkatkllk eldteegirl iekkrlglgk pnviyvknfm
      121 ikeishelee gnpddtrvqv vtgsedscav sqnfenhnlr vsgiknlefp eskiqnfenh
      181 ksrvsqiki
//
LOCUS       WP_235919783             111 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: cyclic-di-AMP receptor [Clostridium].
ACCESSION   WP_235919783
VERSION     WP_235919783.1
KEYWORDS    RefSeq.
SOURCE      Clostridium
  ORGANISM  Clostridium
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae.
REFERENCE   1  (residues 1 to 111)
  AUTHORS   Muller,M., Hopfner,K.P. and Witte,G.
  TITLE     c-di-AMP recognition by Staphylococcus aureus PstA
  JOURNAL   FEBS Lett 589 (1), 45-51 (2015)
   PUBMED   25435171
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017920.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06153.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Clostridium"
                     /db_xref="taxon:1485"
     Protein         1..111
                     /product="cyclic-di-AMP receptor"
                     /calculated_mol_wt=12201
     Region          1..96
                     /region_name="DarA"
                     /note="Cyclic di-AMP receptor DarA/PstA [Signal
                     transduction mechanisms]; COG3870"
                     /db_xref="CDD:443079"
ORIGIN      
        1 mnvmliivqe rdaaglaaaf kkhriqatki dagglvsnrr lnvflvgtdr veetlklvei
       61 screraieie dkeynghmfv dvqknivigg atvlllgear llkikglcdq e
//
LOCUS       WP_235919999             558 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase TerL endonuclease subunit [Heyndrickxia coagulans].
ACCESSION   WP_235919999
VERSION     WP_235919999.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia coagulans (Bacillus coagulans)
  ORGANISM  Heyndrickxia coagulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
REFERENCE   1  (residues 1 to 558)
  AUTHORS   Xu,R.G., Jenkins,H.T., Chechik,M., Blagova,E.V., Lopatina,A.,
            Klimuk,E., Minakhin,L., Severinov,K., Greive,S.J. and Antson,A.A.
  TITLE     Viral genome packaging terminase cleaves DNA using the canonical
            RuvC-like two-metal catalysis mechanism
  JOURNAL   Nucleic Acids Res 45 (6), 3580-3590 (2017)
   PUBMED   28100693
REFERENCE   2  (residues 1 to 558)
  AUTHORS   Hilbert,B.J., Hayes,J.A., Stone,N.P., Duffy,C.M., Sankaran,B. and
            Kelch,B.A.
  TITLE     Structure and mechanism of the ATPase that powers viral genome
            packaging
  JOURNAL   Proc Natl Acad Sci U S A 112 (29), E3792-E3799 (2015)
   PUBMED   26150523
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042863.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20441.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Heyndrickxia coagulans"
                     /db_xref="taxon:1398"
     Protein         1..558
                     /product="terminase TerL endonuclease subunit"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /calculated_mol_wt=64719
     Region          8..533
                     /region_name="YmfN"
                     /note="Phage terminase-like protein, large subunit,
                     contains N-terminal HTH domain [Mobilome: prophages,
                     transposons]; COG4626"
                     /db_xref="CDD:443665"
ORIGIN      
        1 mtyenvlsyq thpyieeyfr lidsgeipac keqhqlvayl kkvlsrddvy idekmvknsv
       61 eiparyfpye lypwqkfanv fifglrwkkd ktlvfdryff ymgrgagkng ffsydsffmm
      121 skqhgiphyd idivatsegq aktsfkdvhs vlempenekr lkkafyrskv siinqatkse
      181 lryntsnart kdgkrpgcvm fdeeheydny daikvftsgg gkvkdyrefh fstdgnvrgg
      241 plddlkeear mvlngeiedi gffpfickld dpeeandpem wpkanpslpy netlkrkmlr
      301 efslaqrkpa ikiefmtkrm nspisdprfe vasyedrlat nqpippqlkg mdaiggvdfa
      361 dvrdfcscgi llkykgkryw lqhtfihhma lelqdinrdi iqlavdkgla eivygksipp
      421 ekvvawyikm aekyyikkic mddyrasilg pkleesgfev qivrrgrvth srlspivddc
      481 finhtlvfgn dplmrwyvgn vyvefldndn keykkidkek rktdgffafl halnadaele
      541 dygdidlnsg pgikpiiv
//
LOCUS       WP_235920004             600 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6020 family protein [Heyndrickxia coagulans].
ACCESSION   WP_235920004
VERSION     WP_235920004.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia coagulans (Bacillus coagulans)
  ORGANISM  Heyndrickxia coagulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039324.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19484.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Heyndrickxia coagulans"
                     /db_xref="taxon:1398"
     Protein         1..600
                     /product="DUF6020 family protein"
                     /calculated_mol_wt=70401
     Region          <172..>440
                     /region_name="DUF6020"
                     /note="Family of unknown function (DUF6020); pfam19484"
                     /db_xref="CDD:466106"
ORIGIN      
        1 mfghqktmha vlsfvigila glgfllfsys fksvpgwypv ffalagsfla ygaifwnigw
       61 mkrplkwasf lfslvlsviv tfalkgpqqh lahqpflinc liylatvlfl lfamllaiki
      121 lyaltesrae gdvprrhily fsilpllisl lyfwafypgi lmadsvnqwq qahstfyndw
      181 hpavmtwlik ftahiwdtpa syvifqfilt alitgyvfyv feklrvkkpv lwlgyaffcf
      241 lpliplysvv iwkdtlfsyf llaftvmliq iidsngkwlr sfphllflyf svcgvifyrh
      301 ngwpvllati viflfflrkr ylymygvfal avitflvvtg pvykhykvfp adetesysip
      361 yqqigrivke nghitpaqra vinqvmpipd wkkyyhptdv dmikftphfd rayikshkka
      421 ffstwfalcr qnpklaleaf ydqeklswkl yipgedlrrp ifrnkdfeky rpvyfmtqkn
      481 vqkyhvhykw fyykdygsdl anktlsswit qinqrfshgi lrvllmpafy lylillflft
      541 ailkgnwrlv iaavpmflnl gsmfaaipaq diryffpnfl lavpffflat ltsrkrdshg
//
LOCUS       WP_235920006              76 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-binding domain-containing protein [Heyndrickxia coagulans].
ACCESSION   WP_235920006
VERSION     WP_235920006.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia coagulans (Bacillus coagulans)
  ORGANISM  Heyndrickxia coagulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015411.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03446.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Heyndrickxia coagulans"
                     /db_xref="taxon:1398"
     Protein         1..76
                     /product="NAD(P)-binding domain-containing protein"
                     /GO_function="GO:0050661 - NADP binding [Evidence IEA]"
                     /calculated_mol_wt=8295
     Region          6..>64
                     /region_name="MmsB"
                     /note="3-hydroxyisobutyrate dehydrogenase or related
                     beta-hydroxyacid dehydrogenase [Lipid transport and
                     metabolism]; COG2084"
                     /db_xref="CDD:441687"
ORIGIN      
        1 meafvmkigw iglghmgspm acrlldahfd lfvynrtikk teklteagaa vcktpkeiae
       61 nadvaavyka lkhlnf
//
LOCUS       WP_235920048              45 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein, partial [Heyndrickxia
            coagulans].
ACCESSION   WP_235920048
VERSION     WP_235920048.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia coagulans (Bacillus coagulans)
  ORGANISM  Heyndrickxia coagulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
REFERENCE   1  (residues 1 to 45)
  AUTHORS   Yang,W. and Steitz,T.A.
  TITLE     Crystal structure of the site-specific recombinase gamma delta
            resolvase complexed with a 34 bp cleavage site
  JOURNAL   Cell 82 (2), 193-207 (1995)
   PUBMED   7628011
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014814.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02796.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..45
                     /organism="Heyndrickxia coagulans"
                     /db_xref="taxon:1398"
     Protein         1..>45
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0000150 - DNA strand exchange activity
                     [Evidence IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
     Region          1..>36
                     /region_name="COG4584"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:443641"
ORIGIN      
        1 mkikqlkeqg fkirriarkl gisrttvyky lekspeemal weast
//
LOCUS       WP_235920058             124 aa            linear   BCT 02-MAR-2025
DEFINITION  PTS system mannose/fructose/sorbose family transporter subunit IID
            [Heyndrickxia coagulans].
ACCESSION   WP_235920058
VERSION     WP_235920058.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia coagulans (Bacillus coagulans)
  ORGANISM  Heyndrickxia coagulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015570.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03613.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Heyndrickxia coagulans"
                     /db_xref="taxon:1398"
     Protein         1..124
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /calculated_mol_wt=13509
     Region          <7..124
                     /region_name="PRK09855"
                     /note="PTS N-acetylgalactosamine transporter subunit IID;
                     cl01507"
                     /db_xref="CDD:470226"
ORIGIN      
        1 mniecnffii gkisvgyslg traiskiren ssvisqaati lgvtviggli atyvnielal
       61 kipvsaghti slqkdfldri fpkllpfayt flmywllkak kispviliia tfimafllsf
      121 lgvl
//
LOCUS       WP_235920090             480 aa            linear   BCT 02-MAR-2025
DEFINITION  RNase A-like domain-containing protein [Heyndrickxia coagulans].
ACCESSION   WP_235920090
VERSION     WP_235920090.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia coagulans (Bacillus coagulans)
  ORGANISM  Heyndrickxia coagulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
REFERENCE   1  (residues 1 to 480)
  AUTHORS   Batot,G., Michalska,K., Ekberg,G., Irimpan,E.M., Joachimiak,G.,
            Jedrzejczak,R., Babnigg,G., Hayes,C.S., Joachimiak,A. and
            Goulding,C.W.
  TITLE     The CDI toxin of Yersinia kristensenii is a novel bacterial member
            of the RNase A superfamily
  JOURNAL   Nucleic Acids Res 45 (9), 5013-5025 (2017)
   PUBMED   28398546
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037816.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18431.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Heyndrickxia coagulans"
                     /db_xref="taxon:1398"
     Protein         1..480
                     /product="RNase A-like domain-containing protein"
                     /calculated_mol_wt=53159
     Region          <1..>148
                     /region_name="YeeF"
                     /note="Predicted ribonuclease, toxin component of the
                     YeeF-YezG toxin-antitoxin module [Defense mechanisms];
                     COG5444"
                     /db_xref="CDD:444195"
     Region          367..479
                     /region_name="CdiA-CT_Yk_RNaseA-like"
                     /note="C-terminal (CT) domain of the contact-dependent
                     growth inhibition (CDI) system protein CdiA (CdiA-CT) of
                     Yersinia kristensenii, and similar proteins; cd20684"
                     /db_xref="CDD:411002"
     Site            order(368,371..372,392..394,431,433,449,461,463,474..475,
                     477)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:411002"
     Site            order(372,383,475,477)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:411002"
ORIGIN      
        1 mrkvsdlvsl pkldveekly yiqkarkkan ktlehlydfd skaastldsl dkdmdtmerf
       61 irqmelmagd gsldiatynp kqfvtteayr slegeliqka gvkpvqtmkv qdfggylsvk
      121 fhvyedgvta meyrkpgskq vyyelvdeip keaiprekkt ddplymdiwn giyegsgkav
      181 gdtiegletl lnprtyismg yngakyvnql isspeetlks tasrtidmak ymgmavknaf
      241 erdvingdak srtafftyaf vfiglsalgd kgiskistag kamnagrlae kveklrvnte
      301 vtpaleatga gptkipynvm ddlgvriqka aeerwtgnks idnikqgdks slapgggltt
      361 heakgghlie rhigktdeel lerlesnpki tgsstfkdrm taekvantvl snpkniekiq
      421 kwlsdpnsrp tlplrfkgng eiigrsvsrn skevenvtna kivlkkdnng sfiltgypvk
//
LOCUS       WP_235919861             238 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: CvpA family protein [Clostridium].
ACCESSION   WP_235919861
VERSION     WP_235919861.1
KEYWORDS    RefSeq.
SOURCE      Clostridium
  ORGANISM  Clostridium
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae.
REFERENCE   1  (residues 1 to 238)
  AUTHORS   Fath,M.J., Mahanty,H.K. and Kolter,R.
  TITLE     Characterization of a purF operon mutation which affects colicin V
            production
  JOURNAL   J Bacteriol 171 (6), 3158-3161 (1989)
   PUBMED   2542219
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014704.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02674.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Clostridium"
                     /db_xref="taxon:1485"
     Protein         1..238
                     /product="CvpA family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009403 - toxin biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=26326
     Region          <122..>182
                     /region_name="CvpA"
                     /note="Colicin V production accessory protein CvpA,
                     regulator of purF expression and biofilm formation
                     [Nucleotide transport and metabolism, Cell
                     wall/membrane/envelope biogenesis]; COG1286"
                     /db_xref="CDD:440897"
ORIGIN      
        1 milehwlsig agifligmml yghyrgllkq cvslgalvlt ivivklstpy itdflkdnps
       61 irknagnail saagweapae nqtgipaaqr isiekmnlpe pvkeillenn nseiyhmlgv
      121 sqfaeyisly ladmlinavv savlflivfi lihlavkwld iiarlpiihg lnhiagavmg
      181 laygllllwm alflmklfsa tptggmlieq vnqsrwlnfl yrynllsilf ggimrgif
//
LOCUS       WP_235920089              65 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5344 family protein [Heyndrickxia coagulans].
ACCESSION   WP_235920089
VERSION     WP_235920089.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia coagulans (Bacillus coagulans)
  ORGANISM  Heyndrickxia coagulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
REFERENCE   1  (residues 1 to 65)
  AUTHORS   Daleke,M.H., Ummels,R., Bawono,P., Heringa,J.,
            Vandenbroucke-Grauls,C.M., Luirink,J. and Bitter,W.
  TITLE     General secretion signal for the mycobacterial type VII secretion
            pathway
  JOURNAL   Proc Natl Acad Sci U S A 109 (28), 11342-11347 (2012)
   PUBMED   22733768
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17279.8
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Heyndrickxia coagulans"
                     /db_xref="taxon:1398"
     Protein         1..65
                     /product="DUF5344 family protein"
                     /calculated_mol_wt=7088
     Region          <19..57
                     /region_name="DUF5344"
                     /note="Family of unknown function (DUF5344); pfam17279"
                     /db_xref="CDD:435835"
ORIGIN      
        1 mgdsgsyhls sllhlvhlnq klgnlltayq tvtlkneaaa kkavhamkey deqldkgfes
       61 qamsr
//
LOCUS       WP_235920308             787 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma 54-interacting transcriptional regulator [Heliomicrobium
            gestii].
ACCESSION   WP_235920308
VERSION     WP_235920308.1
KEYWORDS    RefSeq.
SOURCE      Heliomicrobium gestii
  ORGANISM  Heliomicrobium gestii
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Heliobacteriaceae; Heliomicrobium.
REFERENCE   1  (residues 1 to 787)
  AUTHORS   Studholme,D.J. and Dixon,R.
  TITLE     Domain architectures of sigma54-dependent transcriptional
            activators
  JOURNAL   J Bacteriol 185 (6), 1757-1767 (2003)
   PUBMED   12618438
REFERENCE   2  (residues 1 to 787)
  AUTHORS   Chaney,M., Grande,R., Wigneshweraraj,S.R., Cannon,W., Casaz,P.,
            Gallegos,M.T., Schumacher,J., Jones,S., Elderkin,S., Dago,A.E.,
            Morett,E. and Buck,M.
  TITLE     Binding of transcriptional activators to sigma 54 in the presence
            of the transition state analog ADP-aluminum fluoride: insights into
            activator mechanochemical action
  JOURNAL   Genes Dev 15 (17), 2282-2294 (2001)
   PUBMED   11544185
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00158.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..787
                     /organism="Heliomicrobium gestii"
                     /db_xref="taxon:2699"
     Protein         1..787
                     /product="sigma 54-interacting transcriptional regulator"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008134 - transcription factor binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=84618
     Region          11..>78
                     /region_name="PtsH"
                     /note="HPr or related phosphotransfer protein [Signal
                     transduction mechanisms, Carbohydrate transport and
                     metabolism]; COG1925"
                     /db_xref="CDD:441528"
     Region          <157..>287
                     /region_name="PRK11086"
                     /note="sensory histidine kinase DcuS; Provisional"
                     /db_xref="CDD:236839"
     Region          276..766
                     /region_name="RocR"
                     /note="RocR-type transcriptional regulator, contains PAS,
                     AAA-type ATPase, and DNA-binding Fis domains
                     [Transcription, Signal transduction mechanisms]; COG3829"
                     /db_xref="CDD:443041"
ORIGIN      
        1 mtkphysltn etkaiirhek glharvaami vqksselqsr hqvalylrhr drppipattl
       61 lqlialavqp gdalwvsara pevakeerip psvdgrcgdg srgegttkna avtngagasg
      121 sgrdrpagda apadlavkel vrflesdfav sddqiqhqid nllqdsalta gqvfssmadg
      181 livtdaqdvv tvfnpaaeri mglragdvlg rkavdaipgs rmhivsgtgq pelgrrqvig
      241 gaviltnrtp ivddgqikga vavfedisal ekvthelqdv kelkerlqli lesvqdgicv
      301 vdregrvsyv npayarivng rrddligqdv rvispkgarr qaldtgrpvl ghvaqktgem
      361 tvvadaypii vdgavtgvvs ivktltdaqs laeklnrmaa raeyleaelr rtkksagafa
      421 rfigqsgkvr dalamaekaa egpstvlirg esgtgkelva egihesgpra kgpyirvnca
      481 aipetllese lfghekgaft gaikrklgkf elahrgtlfl deigemdkgm qakllrvlqq
      541 kevsrvggee tfkvdvkiia atnqdleklv aegrfredly yrlnvipill pplrerredi
      601 pllvehflea agreqgkail glgsdalaal mtyawpgnvr elanliervv tlsdgpwitr
      661 adlptylqer ggeeeptats vstvesalpl hsgaltgeav tvakgkvtdg eaegeaihap
      721 lltweeyeqq iitlalrrhg synaaakalg lthktvaaka rkfgieksgg drwigekeeg
      781 mgksing
//
LOCUS       WP_235920496             212 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-dependent oxidoreductase [Heliomicrobium gestii].
ACCESSION   WP_235920496
VERSION     WP_235920496.1
KEYWORDS    RefSeq.
SOURCE      Heliomicrobium gestii
  ORGANISM  Heliomicrobium gestii
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Heliobacteriaceae; Heliomicrobium.
REFERENCE   1  (residues 1 to 212)
  AUTHORS   Dengler,U., Niefind,K., Kiess,M. and Schomburg,D.
  TITLE     Crystal structure of a ternary complex of D-2-hydroxyisocaproate
            dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate
            at 1.9 A resolution
  JOURNAL   J Mol Biol 267 (3), 640-660 (1997)
   PUBMED   9126843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02826.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Heliomicrobium gestii"
                     /db_xref="taxon:2699"
     Protein         1..212
                     /product="NAD(P)-dependent oxidoreductase"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
                     /calculated_mol_wt=23037
     Region          <1..207
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(41..43,45,63..65,96..97,124)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:240631"
ORIGIN      
        1 msiarriveg dkntragrft gwaplyhlgt evtgktlgiv gmgnigkava krakgfdmkv
       61 lyynrnrlsp elekefnaey aplesvitqa dfltfhisyn pslrhmigpr elqmmkrtaf
      121 linaargplv deaallealr nktiagaald vyefepkitp glealdnvvl cphlgnatve
      181 trdamaeiaa kniiavltgg kaltpvnpqv ya
//
LOCUS       WP_235920322              76 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma factor G inhibitor Gin [Heliomicrobium gestii].
ACCESSION   WP_235920322
VERSION     WP_235920322.1
KEYWORDS    RefSeq.
SOURCE      Heliomicrobium gestii
  ORGANISM  Heliomicrobium gestii
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Heliobacteriaceae; Heliomicrobium.
REFERENCE   1  (residues 1 to 76)
  AUTHORS   Karmazyn-Campelli,C., Rhayat,L., Carballido-Lopez,R., Duperrier,S.,
            Frandsen,N. and Stragier,P.
  TITLE     How the early sporulation sigma factor sigmaF delays the switch to
            late development in Bacillus subtilis
  JOURNAL   Mol Microbiol 67 (5), 1169-1180 (2008)
   PUBMED   18208527
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022223.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10764.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Heliomicrobium gestii"
                     /db_xref="taxon:2699"
     Protein         1..76
                     /product="sigma factor G inhibitor Gin"
                     /calculated_mol_wt=8274
     Region          10..57
                     /region_name="Gin"
                     /note="Inhibitor of sigma-G Gin; cl11357"
                     /db_xref="CDD:472166"
ORIGIN      
        1 mieaallprc stckqvpadg iagglwlcga flcadcladl sawtnedesy ralkstldrl
       61 wqrpdwrrhl asggrp
//
LOCUS       WP_235920587             296 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Brucella tritici].
ACCESSION   WP_235920587
VERSION     WP_235920587.1
KEYWORDS    RefSeq.
SOURCE      Brucella tritici (Ochrobactrum tritici)
  ORGANISM  Brucella tritici
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 296)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 296)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 296)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Brucella tritici"
                     /db_xref="taxon:94626"
     Protein         1..296
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=31681
     Region          29..286
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(106..107,110,140)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238347"
ORIGIN      
        1 mltrrqmmlg sglalcagls gfgsaaatpa prvvaidwaa teamlsfgii pvglsdtafy
       61 rqrmaapvlp etvvdvgpfw einlealaal kpdfviatdy nlvmtpriad varvelvpsi
      121 ttpnverygl aieilnrvad lcgvspavps svvedaesrf akaretvskh nyavgimlpd
      181 iggremtmyg egtlpdavlq klrlsnvwkg pvngtgmarv gldrlvesae aaflvvdips
      241 qrvqterslq qntmwklltp vrngrvawln qfhpfggvps aahladlias alenma
//
LOCUS       WP_235920608             385 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Brucella tritici].
ACCESSION   WP_235920608
VERSION     WP_235920608.1
KEYWORDS    RefSeq.
SOURCE      Brucella tritici (Ochrobactrum tritici)
  ORGANISM  Brucella tritici
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Brucella tritici"
                     /db_xref="taxon:94626"
     Protein         1..385
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=42094
     Region          <152..323
                     /region_name="YnjB"
                     /note="ABC-type uncharacterized transport system YnjBCD,
                     periplasmic component [General function prediction only];
                     COG4134"
                     /db_xref="CDD:443309"
ORIGIN      
        1 magagfatga glllpkgaaw aqsaklpssp valnvidaag nlaltqpifd nfaseqkalv
       61 srftfnkapa pelpgkikaq qranrididm vivgpdalsa gladdiwtdi ialpdnglpk
      121 lqdiylepaw rmqemskgkg vvvsyypsgp lleyhpdkvk tppktveell awtkenpnkf
      181 iyarpansgp grtflmglpy llgdsdpkdp vkgwdktway lkelhkniey ypagtgalmk
      241 elgegtrdmt vtttgwdinp ralgvvpkem gvsklegfhw vcdahyfaip kgvseekiav
      301 lmefikfslk pnqqaysyda gyfypgpavk evtiemapke sqniiaefgr peyadwiann
      361 pielplepea lvaafrrwde dvaag
//
LOCUS       WP_235920631             305 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Brucella tritici].
ACCESSION   WP_235920631
VERSION     WP_235920631.1
KEYWORDS    RefSeq.
SOURCE      Brucella tritici (Ochrobactrum tritici)
  ORGANISM  Brucella tritici
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Brucella tritici"
                     /db_xref="taxon:94626"
     Protein         1..305
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=34944
     Region          6..103
                     /region_name="cupin_HpaA-like_N"
                     /note="AraC/XylS family transcriptional regulators similar
                     to HpaA, N-terminal cupin domain; cd06999"
                     /db_xref="CDD:380403"
     Region          24..293
                     /region_name="HpaA"
                     /note="4-hydroxyphenylacetate catabolism regulatory
                     protein HpaA; TIGR02297"
                     /db_xref="CDD:131350"
ORIGIN      
        1 msqyfvptye lygeeneqkp dfwlhcetlf srsslhnfei tlhrhesffq llyieggtgq
       61 anfdgvvrtf qtpcailvpp gfnhgfafsr diighivtil sphmsffggg agdatvewlm
      121 qpqlismtga sdeelvllss llrqiqdefh arklyknnll esfvrvifvy imrhayssss
      181 akqedrqilg yarierlqel idryyrehkp vsfyakllgv spthlnrtvk qmtgattqdm
      241 vakkliemar rdliampssv qhigyslgfs dpayfsrffl kmtgetprtf rlrererlaa
      301 ldsss
//
LOCUS       WP_235920668             340 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Brucella tritici].
ACCESSION   WP_235920668
VERSION     WP_235920668.1
KEYWORDS    RefSeq.
SOURCE      Brucella tritici (Ochrobactrum tritici)
  ORGANISM  Brucella tritici
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Brucella tritici"
                     /db_xref="taxon:94626"
     Protein         1..340
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=37497
     Region          40..310
                     /region_name="PRK09685"
                     /note="DNA-binding transcriptional activator FeaR;
                     Provisional"
                     /db_xref="CDD:236612"
ORIGIN      
        1 mnnetsistd miedklrnef wravlkpmye itsedddyqf sgsivarsig siqigatsfn
       61 sqnysrapkl iaqgglnqyi lqlitggdlh gdlngvdvea kqgdiviidl tqtvesqasg
      121 gsritvmipr delekiagwr nlhglvmlad apmtrllfny lrslqslsgd ldrieaqsaq
      181 damltllgas icgteggave alpanlpmrk rilayidenl snpllgphli vkslrisrsr
      241 lyrtfdmdgg variirdkrl drayrilvde rgrhvslkei ayrcgfhdgt qftkafkvrf
      301 gmspkdares daallssdsa nfdyavhvsd eaakrgvdkp
//
LOCUS       WP_235920928             112 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase [Brucella anthropi].
ACCESSION   WP_235920928
VERSION     WP_235920928.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 112)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 112)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..112
                     /product="phosphotransferase"
                     /calculated_mol_wt=12335
     Region          <2..78
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 mpssgadvms hcdlipgnll ardghlvgvl dnggfgpadp aldlvaawhl fdrerrnilr
       61 rhlqsgdfew krgaawafqq amglvwyyrv snpamsmlgr stlsrildds ei
//
LOCUS       WP_235920927             153 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase [Brucella anthropi].
ACCESSION   WP_235920927
VERSION     WP_235920927.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 153)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..153
                     /product="phosphotransferase"
                     /calculated_mol_wt=16654
     Region          30..>140
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 mmhpdqlhid adlvrvliad qfpqygrekv eklettgtvn aifrvgsnia arfplqatnp
       61 aeyakilrne aaamaefaqh spvpapqpmg ighparnypm pwmmqswieg dvatpdglst
      121 snnfaldtan liaslrltdt kailfqelae aai
//
LOCUS       WP_235920944             275 aa            linear   BCT 02-MAR-2025
DEFINITION  winged helix-turn-helix domain-containing protein [Brucella
            anthropi].
ACCESSION   WP_235920944
VERSION     WP_235920944.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 275)
  AUTHORS   Wietzorrek,A. and Bibb,M.
  TITLE     A novel family of proteins that regulates antibiotic production in
            streptomycetes appears to contain an OmpR-like DNA-binding fold
  JOURNAL   Mol Microbiol 25 (6), 1181-1184 (1997)
   PUBMED   9350875
REFERENCE   2  (residues 1 to 275)
  AUTHORS   Martinez-Hackert,E. and Stock,A.M.
  TITLE     The DNA-binding domain of OmpR: crystal structures of a winged
            helix transcription factor
  JOURNAL   Structure 5 (1), 109-124 (1997)
   PUBMED   9016718
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012698.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00486.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..275
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=31425
     Region          59..271
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
ORIGIN      
        1 miiildnrls nlflltdvqf llkliikvkk lsqhlshrrk livnlsvpic tenpqnylil
       61 shilsvggym pslmdlqass nfateaipya ilfdtsente pifdvcatik qnpatrgiil
      121 valtkpcnsm nfldflhagf deifphpfvp erilsflhdr esmplerktl tsdrrervhi
      181 gdlsilpder ilrlgsleir ltptefrilr gfiaapgqvm kreqlikigw pahhyvqlrt
      241 vdvhvgnlrr qlwkltgknl irtvhttgya fefsq
//
LOCUS       WP_235920957             133 aa            linear   BCT 02-MAR-2025
DEFINITION  plasmid mobilization protein [Brucella anthropi].
ACCESSION   WP_235920957
VERSION     WP_235920957.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 133)
  AUTHORS   Rehman,S., Li,Y.G., Schmitt,A., Lassinantti,L., Christie,P.J. and
            Berntsson,R.P.
  TITLE     Enterococcal PcfF Is a Ribbon-Helix-Helix Protein That Recruits the
            Relaxase PcfG Through Binding and Bending of the oriT Sequence
  JOURNAL   Front Microbiol 10, 958 (2019)
   PUBMED   31134011
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046164.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21983.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..133
                     /product="plasmid mobilization protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=14647
     Region          72..121
                     /region_name="MobC"
                     /note="Bacterial mobilization protein (MobC); pfam05713"
                     /db_xref="CDD:428600"
ORIGIN      
        1 mneavsedmr vdkpkpqtih srvsadeyda iddaakavdl tmsaffkavl lqgagikpif
       61 ndedrallsl mledmrmigi nlnqvaraln sgksvsdgai rmvvgdvqkm qvavlselrr
      121 vtrrsgyrhr ske
//
LOCUS       WP_235920964             221 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: NUDIX domain-containing protein [Brucella].
ACCESSION   WP_235920964
VERSION     WP_235920964.1
KEYWORDS    RefSeq.
SOURCE      Brucella
  ORGANISM  Brucella
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Brucella"
                     /db_xref="taxon:234"
     Protein         1..221
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=24949
     Region          80..218
                     /region_name="NUDIX_ADPRase_Ndx2"
                     /note="NUDIX family Ndx2; cd24161"
                     /db_xref="CDD:467609"
ORIGIN      
        1 manqswptpw rsfrvnstvc cdgkaltlac krerqvstgg wmseiktlgs rrvyenrwmk
       61 vredrivypd gsesiygvve kndaalifam ddedgvylve qfrypvgrrf welpqgawqe
      121 qenvdpltla rgelqeetgl taeemvyfge tyeaygfaan kchiflatgl kmgkpnldae
      181 eqglicrrfp igeavemilr gdikdastia afgllrlkgi i
//
LOCUS       WP_235920972             122 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1360 domain-containing protein [Foetidibacter luteolus].
ACCESSION   WP_235920972
VERSION     WP_235920972.1
KEYWORDS    RefSeq.
SOURCE      Foetidibacter luteolus
  ORGANISM  Foetidibacter luteolus
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Foetidibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018765.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07098.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Foetidibacter luteolus"
                     /db_xref="taxon:2608880"
     Protein         1..122
                     /product="DUF1360 domain-containing protein"
                     /calculated_mol_wt=14196
     Region          <57..105
                     /region_name="DUF1360"
                     /note="Protein of unknown function (DUF1360); pfam07098"
                     /db_xref="CDD:399825"
ORIGIN      
        1 mnfqqltvfy stvtsamhyy yfilavlavw rithllsned gpfdivfrlr ralgnsffgr
       61 lidcfyclsi wvslpfavwl qkhivemfvt wlaisgaacl lqkaveqkkp pttqfyeeee
      121 qk
//
LOCUS       WP_235920988             226 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome c biogenesis protein CcsA [Foetidibacter luteolus].
ACCESSION   WP_235920988
VERSION     WP_235920988.1
KEYWORDS    RefSeq.
SOURCE      Foetidibacter luteolus
  ORGANISM  Foetidibacter luteolus
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Foetidibacter.
REFERENCE   1  (residues 1 to 226)
  AUTHORS   Sawyer,E.B. and Barker,P.D.
  TITLE     Continued surprises in the cytochrome c biogenesis story
  JOURNAL   Protein Cell 3 (6), 405-409 (2012)
   PUBMED   22723177
REFERENCE   2  (residues 1 to 226)
  AUTHORS   Stevens,J.M., Mavridou,D.A., Hamer,R., Kritsiligkou,P.,
            Goddard,A.D. and Ferguson,S.J.
  TITLE     Cytochrome c biogenesis System I
  JOURNAL   FEBS J 278 (22), 4170-4178 (2011)
   PUBMED   21958041
REFERENCE   3  (residues 1 to 226)
  AUTHORS   Sanders,C., Turkarslan,S., Lee,D.W. and Daldal,F.
  TITLE     Cytochrome c biogenesis: the Ccm system
  JOURNAL   Trends Microbiol 18 (6), 266-274 (2010)
   PUBMED   20382024
REFERENCE   4  (residues 1 to 226)
  AUTHORS   Page,M.D., Pearce,D.A., Norris,H.A.C. and Ferguson,S.J.
  TITLE     The Paracoccus denitrificans ccmA, B and C genes: cloning and
            sequencing, and analysis of the potential of their products to form
            a haem or apo- c-type cytochrome transporter
  JOURNAL   Microbiology (Reading) 143 (Pt 2), 563-576 (1997)
   PUBMED   9043133
REFERENCE   5  (residues 1 to 226)
  AUTHORS   Delgado,M.J., Yeoman,K.H., Wu,G., Vargas,C., Davies,A.E.,
            Poole,R.K., Johnston,A.W. and Downie,J.A.
  TITLE     Characterization of the cycHJKL genes involved in cytochrome c
            biogenesis and symbiotic nitrogen fixation in Rhizobium
            leguminosarum
  JOURNAL   J Bacteriol 177 (17), 4927-4934 (1995)
   PUBMED   7665469
REFERENCE   6  (residues 1 to 226)
  AUTHORS   Thony-Meyer,L., Fischer,F., Kunzler,P., Ritz,D. and Hennecke,H.
  TITLE     Escherichia coli genes required for cytochrome c maturation
  JOURNAL   J Bacteriol 177 (15), 4321-4326 (1995)
   PUBMED   7635817
REFERENCE   7  (residues 1 to 226)
  AUTHORS   Bonnard,G. and Grienenberger,J.M.
  TITLE     A gene proposed to encode a transmembrane domain of an ABC
            transporter is expressed in wheat mitochondria
  JOURNAL   Mol Gen Genet 246 (1), 91-99 (1995)
   PUBMED   7529870
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013725.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01578.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Foetidibacter luteolus"
                     /db_xref="taxon:2608880"
     gene            1..226
                     /gene="ccsA"
     Protein         1..226
                     /product="cytochrome c biogenesis protein CcsA"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /GO_process="GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /calculated_mol_wt=25555
     Region          11..169
                     /region_name="CcmC"
                     /note="ABC-type transport system involved in cytochrome c
                     biogenesis, permease component [Posttranslational
                     modification, protein turnover, chaperones]; COG0755"
                     /db_xref="CDD:440518"
ORIGIN      
        1 mmkqawwkil afvllmytct ygflvqvpkl ddrmqesirn lffhvpmwfg mtilmtvsvi
       61 ysikylnkhn athdiyassy aaigslfall glltgaiwan yqwgkpwsgd pkqngaaial
      121 liyfayfvlr gavqdeekra rigavynifa ycllfptlfi lprlteslhp ggqgsegnpg
      181 lngsdldprm rlvfwpavig wtllgvwiat lrirlrllte krlana
//
LOCUS       WP_235921057             276 aa            linear   BCT 02-MAR-2025
DEFINITION  prolipoprotein diacylglyceryl transferase family protein
            [Foetidibacter luteolus].
ACCESSION   WP_235921057
VERSION     WP_235921057.1
KEYWORDS    RefSeq.
SOURCE      Foetidibacter luteolus
  ORGANISM  Foetidibacter luteolus
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Foetidibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013915.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01790.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Foetidibacter luteolus"
                     /db_xref="taxon:2608880"
     Protein         1..276
                     /product="prolipoprotein diacylglyceryl transferase family
                     protein"
                     /EC_number="2.4.99.-"
                     /GO_component="GO:0005886 - plasma membrane [Evidence
                     IEA]"
                     /GO_function="GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA]"
                     /GO_process="GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=30935
     Region          3..241
                     /region_name="Lgt"
                     /note="Prolipoprotein diacylglyceryltransferase [Cell
                     wall/membrane/envelope biogenesis]; COG0682"
                     /db_xref="CDD:440446"
ORIGIN      
        1 mhfpveitvg svkillhsia eplaffigfr yflylrkkqg dainsqnrlw vligavfgav
       61 lgsrliggle nvpqmmaakn klfyfyqnkt vlggflggll gvelakklig ektssgdlfa
      121 ypmilaliig rigcfsmgiy eetyglptsl pwgmhlgdnq prhpvclyet lyllllwaal
      181 vqlekryilq ngarfklfli sycmfrflld fikphysfgi glstiqltal aglvyyyryi
      241 ihpgllvqer kkaitgpaae yppspegefy epgsrl
//
LOCUS       WP_235921097             229 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Foetidibacter luteolus].
ACCESSION   WP_235921097
VERSION     WP_235921097.1
KEYWORDS    RefSeq.
SOURCE      Foetidibacter luteolus
  ORGANISM  Foetidibacter luteolus
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Foetidibacter.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 229)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Foetidibacter luteolus"
                     /db_xref="taxon:2608880"
     Protein         1..229
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=26196
     Region          55..227
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(62,86,115,207,210)
                     /site_type="active"
                     /db_xref="CDD:239946"
     Site            order(62,207,210)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:239946"
     Site            order(62,86,115)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:239946"
ORIGIN      
        1 mvnisslrls agkatlfiaf vmlligktha qqppfyndiq kfkqqdslnf ppgkaillvg
       61 sssftkwtdv qqyfpshtii nrgfggsslp dlihyendvi fpykprqiii ycgendfaas
      121 dtvsvatvvg rfktlfndir shwkkvrvdf vsmkpspsrq hlwpkfeean gqikaflete
      181 kkakfidvyn amfnadgkvm edifvedrlh mnekgyaiwq kifepylkd
//
LOCUS       WP_235921132             260 aa            linear   BCT 02-MAR-2025
DEFINITION  PLDc N-terminal domain-containing protein [Foetidibacter luteolus].
ACCESSION   WP_235921132
VERSION     WP_235921132.1
KEYWORDS    RefSeq.
SOURCE      Foetidibacter luteolus
  ORGANISM  Foetidibacter luteolus
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Foetidibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024788.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13396.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Foetidibacter luteolus"
                     /db_xref="taxon:2608880"
     Protein         1..260
                     /product="PLDc N-terminal domain-containing protein"
                     /calculated_mol_wt=30231
     Region          12..258
                     /region_name="COG4700"
                     /note="Uncharacterized conserved protein ECs_4300,
                     contains TPR-like domain [Function unknown]"
                     /db_xref="CDD:443735"
     Site            order(107..108,110,135,138..139,142..143,145..146,170,
                     173..174,177..178,181)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          133..163
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          167..192
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mackhtkple nmffggnyfy yltiglqaic vihclkkgtq nkwiwlivfl pvigslayif
       61 memfsgnelk nvqsgigsvi npggrvkkle eqlrfsdtfn nrvmladayl qtgntnraie
      121 lyessltgaf tenehvltql ilayaevqry ndilkiykkv hnlpqfarsk ahmlyaiale
      181 ktgnsqqaek efifmkgrya yfeqryeygm flqragrtde arnlfkemld eaphlsarer
      241 kynyqwfskv reelrkmqaa
//
LOCUS       WP_235921147             192 aa            linear   BCT 02-MAR-2025
DEFINITION  LPS assembly lipoprotein LptE [Foetidibacter luteolus].
ACCESSION   WP_235921147
VERSION     WP_235921147.1
KEYWORDS    RefSeq.
SOURCE      Foetidibacter luteolus
  ORGANISM  Foetidibacter luteolus
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Foetidibacter.
REFERENCE   1  (residues 1 to 192)
  AUTHORS   Sperandeo,P., Lau,F.K., Carpentieri,A., De Castro,C., Molinaro,A.,
            Deho,G., Silhavy,T.J. and Polissi,A.
  TITLE     Functional analysis of the protein machinery required for transport
            of lipopolysaccharide to the outer membrane of Escherichia coli
  JOURNAL   J Bacteriol 190 (13), 4460-4469 (2008)
   PUBMED   18424520
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016290.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04390.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Foetidibacter luteolus"
                     /db_xref="taxon:2608880"
     gene            1..192
                     /gene="lptE"
     Protein         1..192
                     /product="LPS assembly lipoprotein LptE"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /GO_process="GO:0043165 - Gram-negative-bacterium-type
                     cell outer membrane assembly [Evidence IEA]"
                     /calculated_mol_wt=21282
ORIGIN      
        1 misminkyaa itcpaimgkr intsryalfa mvclfiatil pscgiytfrd vsidyskikt
       61 vkigyienra rgyispqlsp kltdavvqki nsytkltrtn adnadyqitg titnysvsts
      121 aitnqqaaan rltvgahiil fnavdnktqe fdvsrdfdfa asltltqaeg qlmndvvknm
      181 sdeifnrlfs nw
//
LOCUS       WP_235921197             199 aa            linear   BCT 02-MAR-2025
DEFINITION  redoxin domain-containing protein [Foetidibacter luteolus].
ACCESSION   WP_235921197
VERSION     WP_235921197.1
KEYWORDS    RefSeq.
SOURCE      Foetidibacter luteolus
  ORGANISM  Foetidibacter luteolus
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Foetidibacter.
REFERENCE   1  (residues 1 to 199)
  AUTHORS   Chae,H.Z., Robison,K., Poole,L.B., Church,G., Storz,G. and
            Rhee,S.G.
  TITLE     Cloning and sequencing of thiol-specific antioxidant from mammalian
            brain: alkyl hydroperoxide reductase and thiol-specific antioxidant
            define a large family of antioxidant enzymes
  JOURNAL   Proc Natl Acad Sci U S A 91 (15), 7017-7021 (1994)
   PUBMED   8041738
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012787.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00578.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Foetidibacter luteolus"
                     /db_xref="taxon:2608880"
     Protein         1..199
                     /product="redoxin domain-containing protein"
                     /GO_function="GO:0016209 - antioxidant activity [Evidence
                     IEA]"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=22050
     Region          45..196
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 mcckksyiil flltliqtvs paqndsvfnt ktisavtlin tspqkniqlq nafstpltlf
       61 fflspecplc kdysatmnsl qqqygdkmtv ygivpgkays aaevkafaeq yhfsfpllid
      121 kqqqlskyln asvtpeaill nnhqqlvykg aidnlleglg krrvkatany lqnaisqtls
      181 hqpvaikrtk atgckinny
//
LOCUS       WP_235921223             285 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Foetidibacter luteolus].
ACCESSION   WP_235921223
VERSION     WP_235921223.1
KEYWORDS    RefSeq.
SOURCE      Foetidibacter luteolus
  ORGANISM  Foetidibacter luteolus
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Foetidibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14559.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Foetidibacter luteolus"
                     /db_xref="taxon:2608880"
     Protein         1..285
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=31440
     Region          93..>261
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Site            order(175..176,178,205,208..209,212..213,215..216,239,
                     242..243,246..247,250)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          203..233
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          238..261
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mkkqqlilll tasvlliglf ffgrtiprke sstkensaaa ssasepassi ttdklvaqak
       61 akltaqqvnt vnrlekgvvr gdiktqqkes fkqlatfwgd tvhqhllgay ylgesaklen
      121 seknlnfaar lflddlvseh dpemkkwmgl qakalleksl einpandsak vgigvcylyg
      181 nisnapmqgi qlirevlakn phhvyahmil glggvrsgqy dkaiehfndv lkvapdnlea
      241 afnlaeayeq kgdkpnavkw ygvvrdkiqi pqakqeider ikalq
//
LOCUS       WP_235921020            1104 aa            linear   BCT 02-MAR-2025
DEFINITION  4-alpha-glucanotransferase [Foetidibacter luteolus].
ACCESSION   WP_235921020
VERSION     WP_235921020.1
KEYWORDS    RefSeq.
SOURCE      Foetidibacter luteolus
  ORGANISM  Foetidibacter luteolus
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Foetidibacter.
REFERENCE   1  (residues 1 to 1104)
  AUTHORS   Takaha,T., Yanase,M., Okada,S. and Smith,S.M.
  TITLE     Disproportionating enzyme (4-alpha-glucanotransferase; EC 2.4.1.25)
            of potato. Purification, molecular cloning, and potential role in
            starch metabolism
  JOURNAL   J Biol Chem 268 (2), 1391-1396 (1993)
   PUBMED   7678257
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014499.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02446.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Foetidibacter luteolus"
                     /db_xref="taxon:2608880"
     Protein         1..1104
                     /product="4-alpha-glucanotransferase"
                     /EC_number="2.4.1.25"
                     /GO_function="GO:0004134 - 4-alpha-glucanotransferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=124523
     Region          200..1090
                     /region_name="PLN02950"
                     /note="4-alpha-glucanotransferase"
                     /db_xref="CDD:215512"
ORIGIN      
        1 matekntpat eqapavtaet tvnglpvpap kkaaakkakk tgddvvaetd kttkektakk
       61 vaakkaakpv akpkkaeikq eeapaplpdi ilpvqvtpek eettakeeap vkkaarakka
      121 avkeptakap akktgkkatp eaeapaeipa akpkkaaakp kkaatvatpv aeenipftet
      181 iaetaepata ppvaetepap qapatvklvm hlrfhtehgq hlfitgnhei fgnediskal
      241 pmhyvhndlw avdteldiss mpekgitynh vlrypdgivs ydwgsdkvlk adlitgnsih
      301 isdawnhagf yenafytepf tnvllkdnyt avaptetvga thllkvkapl ltkgqticit
      361 gaaeslgnwk kdapvllsrk enedeftvrv dlskahfpvk ykyavydvee kkivryedga
      421 drflqaspvq tsfsiindgf avlpnntwkg agvsvpvfsl rsknafgcge ftdlkllvdw
      481 akktglkliq ilpvndttat hswvdsypya aisafalhpm ylnlakvage kgkhlvtale
      541 derlrinkag avdyeavnsl kwklvqqlyp llkdetfase dyqayfeknk hwltpyaafc
      601 ylrdkyatvd fnkwpqynsy naqeiaglas qnedatglhy fiqyhlhlql keaadyahan
      661 giilkgdiai gvyrygadaw qqpglyhmdm qagappddfa pkgqnwgfpt ynwekmkhdg
      721 fawwrqrfeq msyyfdafri dhilgffriw sipyhsvegi mghfepaipv svhefhargi
      781 afdfnrytrp yitdkilndt fgdqqdyirr tyllkdgsgn yllkpefstq rqienyfggf
      841 eknahnawlk qslfniisnv ilfeaegsdg qlfhfrfsme ntlsfrqldg htqnqlkdly
      901 vnyffrrqdn fwkveamqkl pglkrvtnml vcgedlglvp gcvhdvmkql gilsleiqrm
      961 pkdshkeffh padapylsvv tpsthdmsti rswweedrnk sqrfyntvmg qkgyapylcd
     1021 awvnkaiveq hlfspamwsi fqvqdllgin qkirkeephd erinvpanpk nywryrvhln
     1081 ledllnaeef ntelqdavtr sgrg
//
LOCUS       WP_235921224             173 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Lentzea tibetensis].
ACCESSION   WP_235921224
VERSION     WP_235921224.1
KEYWORDS    RefSeq.
SOURCE      Lentzea tibetensis
  ORGANISM  Lentzea tibetensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Lentzea.
REFERENCE   1  (residues 1 to 173)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Lentzea tibetensis"
                     /db_xref="taxon:2591470"
     Protein         1..173
                     /product="AMP-binding protein"
                     /calculated_mol_wt=18480
     Region          <21..>134
                     /region_name="EntF"
                     /note="seryl-AMP synthase component of non-ribosomal
                     peptide synthetase [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG1020"
                     /db_xref="CDD:440643"
ORIGIN      
        1 maspdtvtps agaaslppds wndtgrdvaw ttltglieaq altrpdatav ihpggrltfa
       61 eldaranrla rllirrgagp egivavalpr svdivvaela vlkagaaflp idpdypadri
      121 tfmlddarpv lvitrprspr dcpvrtsspw ttcpqwtrtg rqgshrcpnt rrt
//
LOCUS       WP_235921231             136 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Foetidibacter luteolus].
ACCESSION   WP_235921231
VERSION     WP_235921231.1
KEYWORDS    RefSeq.
SOURCE      Foetidibacter luteolus
  ORGANISM  Foetidibacter luteolus
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Foetidibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Foetidibacter luteolus"
                     /db_xref="taxon:2608880"
     Protein         1..136
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=14500
     Region          <1..136
                     /region_name="PRK06523"
                     /note="short chain dehydrogenase; Provisional"
                     /db_xref="CDD:180604"
ORIGIN      
        1 midrksgvii hiasiqgklp lydstlpyaa akaglinysk slsnevtpkg vrvltvspgw
       61 irtentkvwl etiakhsnis ieeaqqnvvn alggvpygrp aepeevaelv gflvsprany
      121 ltgtefvidg gtipti
//
LOCUS       WP_235921256             479 aa            linear   BCT 02-MAR-2025
DEFINITION  GMC oxidoreductase [Lentzea tibetensis].
ACCESSION   WP_235921256
VERSION     WP_235921256.1
KEYWORDS    RefSeq.
SOURCE      Lentzea tibetensis
  ORGANISM  Lentzea tibetensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Lentzea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05199.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Lentzea tibetensis"
                     /db_xref="taxon:2591470"
     Protein         1..479
                     /product="GMC oxidoreductase"
                     /GO_function="GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /calculated_mol_wt=51483
     Region          80..292
                     /region_name="NADB_Rossmann"
                     /note="Rossmann-fold NAD(P)(+)-binding proteins; cl21454"
                     /db_xref="CDD:473865"
     Region          <418..470
                     /region_name="GMC_oxred_C"
                     /note="GMC oxidoreductase; pfam05199"
                     /db_xref="CDD:398739"
ORIGIN      
        1 maalrlaqag vdvhmvemgm swdtpgpdgk ifantttpdq rsfwlrtrtk qplsnflgfp
       61 idkaiprctg ildaeefsgi tvyqgrgvgg gslvnggmav tprrehfsdv lssvnademy
      121 nvyypranae lgvglidpaw fdttacyqya rvgrkhaqrs gfpfvfvptv ydwnymkqea
      181 agtvpksala geilygnnyg kkslqktylp kikatgrvti splhkvtsva paagggyavt
      241 idqinttgdt lttktvtaak vffaagsvgt skllvklrst gvlpnlnnev gkgwgdngnv
      301 mcgranhlwd ptgplqssip tagidnwasg gafaevaplp tgietyasfy lsitknpnra
      361 efswnaaagk vdlswqtawk qtsitaakti fdkinakegt iyrtdlfgvy kiwgdhltyh
      421 plggavlnka tdnygrlhgy aglyvidgal ipgntsvnpf vtitalaern iekiiatdl
//
LOCUS       WP_235921270             163 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Lentzea tibetensis].
ACCESSION   WP_235921270
VERSION     WP_235921270.1
KEYWORDS    RefSeq.
SOURCE      Lentzea tibetensis
  ORGANISM  Lentzea tibetensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Lentzea.
REFERENCE   1  (residues 1 to 163)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07883.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Lentzea tibetensis"
                     /db_xref="taxon:2591470"
     Protein         1..163
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=17591
     Region          20..136
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 mialpsgdsk ettvtlgggy mlpsreghgi aaiglgitmk tngksthday slfeytippe
       61 tdgppphvht redesficls grldvhlgge dfvlehgdfl flprdvvhaf rnpyadesrv
      121 isvvspagle ryyqaladlp pgpkdiskiq avmadfgiel rmp
//
LOCUS       WP_235921276             448 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Lentzea tibetensis].
ACCESSION   WP_235921276
VERSION     WP_235921276.1
KEYWORDS    RefSeq.
SOURCE      Lentzea tibetensis
  ORGANISM  Lentzea tibetensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Lentzea.
REFERENCE   1  (residues 1 to 448)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Lentzea tibetensis"
                     /db_xref="taxon:2591470"
     Protein         1..448
                     /product="AMP-binding protein"
                     /calculated_mol_wt=48053
     Region          4..441
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(126,129..134,136..137)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(129,241..242,263..268,331,343,346,357,435)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(129,169..170,217,219..220,223,241..242,263..268,331,
                     343,346,354..357,416)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(169,219..220,223,241,354..356,410,416)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
ORIGIN      
        1 mpecslpdhv larehgdkvt vldgvtgeri tyaelasqva lvaggvraag frpgdvvalr
       61 mhngprfpva vhgvmaagaa vallnpdltp detqrlldls gatlldelpq aeaelppvdp
      121 astaailfss gttgatkpvr fthrhlvanl eqtragwrva endvlaatlp ffhiygfsii
      181 lnsgllagat lvtlprvnid vyldtlenhh vtraylvppv vaalakapkr hlpdlryalc
      241 gaapldpvhr eraeetlgcl irqgfgltea ggthqvfddd fastdpesig tlspgtearv
      301 vepgtdsdae vgellvrgpq vsadgwlrtg dlvsvdehsr fyvrdrikem ikykayqvap
      361 aeleallcrh pgvadvavvg vpdaaageip kafvvaahev dpvelmrwaa ervapykkir
      421 qvefvdeipr svsgkilrrl lkertcvs
//
LOCUS       WP_235921278             367 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 2 TIM barrel-domain containing protein
            [Foetidibacter luteolus].
ACCESSION   WP_235921278
VERSION     WP_235921278.1
KEYWORDS    RefSeq.
SOURCE      Foetidibacter luteolus
  ORGANISM  Foetidibacter luteolus
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Foetidibacter.
REFERENCE   1  (residues 1 to 367)
  AUTHORS   Jacobson,R.H., Zhang,X.J., DuBose,R.F. and Matthews,B.W.
  TITLE     Three-dimensional structure of beta-galactosidase from E. coli
  JOURNAL   Nature 369 (6483), 761-766 (1994)
   PUBMED   8008071
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02836.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Foetidibacter luteolus"
                     /db_xref="taxon:2608880"
     Protein         1..367
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=42001
     Region          56..367
                     /region_name="COG3934"
                     /note="Endo-1,4-beta-mannosidase [Carbohydrate transport
                     and metabolism]"
                     /db_xref="CDD:443135"
ORIGIN      
        1 mkkrffawil pvvlmscagg anetkeagqk dssattepra vwtveqannw ykgkgwmagc
       61 nftpstainq lefwqaetfd tatinrelgy aegiglnlmr vflhhlaweq dkegfknrmk
      121 tyldiadrhh iatmfvffdd vwnenykagk qpepkpgvhn sgwirdpgkl lyddttliik
      181 leeyvkdvlt tfksdkrill wdlynepgns gyknksmpll ektftwartv npdqplsagv
      241 wskeltdlnv yqlansdvit yhnyddekgh qaaidtlkky nrplicteym artrnsrfdn
      301 impilkkeni aainwglvag ktntmyawdt pipdgsepkv wfheifrkdg safsekeial
      361 iksltgk
//
LOCUS       WP_235921300             392 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome P450 [Lentzea tibetensis].
ACCESSION   WP_235921300
VERSION     WP_235921300.1
KEYWORDS    RefSeq.
SOURCE      Lentzea tibetensis
  ORGANISM  Lentzea tibetensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Lentzea.
REFERENCE   1  (residues 1 to 392)
  AUTHORS   Werck-Reichhart,D. and Feyereisen,R.
  TITLE     Cytochromes P450: a success story
  JOURNAL   Genome Biol 1 (6), REVIEWS3003 (2000)
   PUBMED   11178272
REFERENCE   2  (residues 1 to 392)
  AUTHORS   Graham-Lorence,S., Amarneh,B., White,R.E., Peterson,J.A. and
            Simpson,E.R.
  TITLE     A three-dimensional model of aromatase cytochrome P450
  JOURNAL   Protein Sci 4 (6), 1065-1080 (1995)
   PUBMED   7549871
REFERENCE   3  (residues 1 to 392)
  AUTHORS   Degtyarenko,K.N. and Archakov,A.I.
  TITLE     Molecular evolution of P450 superfamily and P450-containing
            monooxygenase systems
  JOURNAL   FEBS Lett 332 (1-2), 1-8 (1993)
   PUBMED   8405421
REFERENCE   4  (residues 1 to 392)
  AUTHORS   Nelson,D.R., Kamataki,T., Waxman,D.J., Guengerich,F.P.,
            Estabrook,R.W., Feyereisen,R., Gonzalez,F.J., Coon,M.J.,
            Gunsalus,I.C., Gotoh,O. et al.
  TITLE     The P450 superfamily: update on new sequences, gene mapping,
            accession numbers, early trivial names of enzymes, and nomenclature
  JOURNAL   DNA Cell Biol 12 (1), 1-51 (1993)
   PUBMED   7678494
REFERENCE   5  (residues 1 to 392)
  AUTHORS   Guengerich,F.P.
  TITLE     Reactions and significance of cytochrome P-450 enzymes
  JOURNAL   J Biol Chem 266 (16), 10019-10022 (1991)
   PUBMED   2037557
REFERENCE   6  (residues 1 to 392)
  AUTHORS   Nebert,D.W. and Gonzalez,F.J.
  TITLE     P450 genes: structure, evolution, and regulation
  JOURNAL   Annu Rev Biochem 56, 945-993 (1987)
   PUBMED   3304150
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00067.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Lentzea tibetensis"
                     /db_xref="taxon:2591470"
     Protein         1..392
                     /product="cytochrome P450"
                     /GO_function="GO:0004497 - monooxygenase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=42017
     Region          16..392
                     /region_name="Cyp158A-like"
                     /note="cytochrome P450 family 158, subfamily A and similar
                     cytochrome P450s; cd11031"
                     /db_xref="CDD:410657"
     Site            order(57,86,90,97,142,226,229..230,232..234,236..237,270,
                     275,280,282,305,333..335,339,341..343,347)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410657"
     Site            order(57,69,71..77,162..165,174,178,182,224..225,228..229,
                     232..233,275..276,279..280)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410657"
ORIGIN      
        1 mttypfdtpp gadtepegvr lleeapmvra smdgrevwla lgydavrqvl sdqrfsreaa
       61 agpgsplvnq aganpqllvs mdpprhtrvr rlmanaftpr mvdrlaprvd elvstlltdf
      121 srlaqpadlv rhfaeplpim vicellgvpa eaqerirgwa gvliartayt paeigaaikq
      181 vdgylaalie erraapdeal isaliavnde gghlspselv snvqllliag hettvsqign
      241 slvtlfqhpa qwellrsdpa llpqavdell rhsrltsatm prvavadtpv gevvvragea
      301 viplitvanr dpsaypspev fditragpap hvglghgphf clgaqlarle lraalgglla
      361 rfpglapavp vdelewktgl stralhslpv tw
//
LOCUS       WP_235921327             248 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Foetidibacter luteolus].
ACCESSION   WP_235921327
VERSION     WP_235921327.1
KEYWORDS    RefSeq.
SOURCE      Foetidibacter luteolus
  ORGANISM  Foetidibacter luteolus
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Foetidibacter.
REFERENCE   1  (residues 1 to 248)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 248)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Foetidibacter luteolus"
                     /db_xref="taxon:2608880"
     Protein         1..248
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=28065
     Region          2..193
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(91,93,95..96,172..173,193)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 mmkiiplseg sftidktkif vpfnedndnl qsrpvgsllv evqpfvvvte kdvllldtgl
       61 gfgkrgelql hanlkangid pasitkvlmt hlhkdhaggv srkdnlgnyh isfpeatyyi
      121 qkreldfafd tgfpsfmtee lsllqhssnv vlleedkgsi dnyityevta ghspyhqvfw
      181 mkdssetiff ggddapqlqq mksrfvakyd ydgkkcmqlr qqwweagraa gwtflfyhdi
      241 atpfikqa
//
LOCUS       WP_235921312             165 aa            linear   BCT 02-MAR-2025
DEFINITION  OB-fold nucleic acid binding domain-containing protein
            [Foetidibacter luteolus].
ACCESSION   WP_235921312
VERSION     WP_235921312.1
KEYWORDS    RefSeq.
SOURCE      Foetidibacter luteolus
  ORGANISM  Foetidibacter luteolus
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Foetidibacter.
REFERENCE   1  (residues 1 to 165)
  AUTHORS   Koonin,E.V., Wolf,Y.I. and Aravind,L.
  TITLE     Protein fold recognition using sequence profiles and its
            application in structural genomics
  JOURNAL   Adv Protein Chem 54, 245-275 (2000)
   PUBMED   10829230
REFERENCE   2  (residues 1 to 165)
  AUTHORS   Bochkarev,A., Pfuetzner,R.A., Edwards,A.M. and Frappier,L.
  TITLE     Structure of the single-stranded-DNA-binding domain of replication
            protein A bound to DNA
  JOURNAL   Nature 385 (6612), 176-181 (1997)
   PUBMED   8990123
REFERENCE   3  (residues 1 to 165)
  AUTHORS   Keshav,K.F., Chen,C. and Dutta,A.
  TITLE     Rpa4, a homolog of the 34-kilodalton subunit of the replication
            protein A complex
  JOURNAL   Mol Cell Biol 15 (6), 3119-3128 (1995)
   PUBMED   7760808
REFERENCE   4  (residues 1 to 165)
  AUTHORS   Ruff,M., Krishnaswamy,S., Boeglin,M., Poterszman,A., Mitschler,A.,
            Podjarny,A., Rees,B., Thierry,J.C. and Moras,D.
  TITLE     Class II aminoacyl transfer RNA synthetases: crystal structure of
            yeast aspartyl-tRNA synthetase complexed with tRNA(Asp)
  JOURNAL   Science 252 (5013), 1682-1689 (1991)
   PUBMED   2047877
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013499.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01336.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Foetidibacter luteolus"
                     /db_xref="taxon:2608880"
     Protein         1..165
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /calculated_mol_wt=18289
     Region          <2..119
                     /region_name="dnaE2"
                     /note="error-prone DNA polymerase; Validated; PRK05672"
                     /db_xref="CDD:235553"
ORIGIN      
        1 mslkvhlvsf ireklskrqv lsaaglsqwp dgtpvrvvgl vlvrqrpgta sgicfitied
       61 etgtanlvaf qnlfnkyrke ilrstllmve gtlqregevt hviiqrcydm sslllepgsp
      121 edktpplltl sradekegdi lspqqkkkal sklvqgelfp srdfk
//
LOCUS       WP_235921376             509 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-binding domain-containing protein [Lentzea tibetensis].
ACCESSION   WP_235921376
VERSION     WP_235921376.1
KEYWORDS    RefSeq.
SOURCE      Lentzea tibetensis
  ORGANISM  Lentzea tibetensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Lentzea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025114.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13738.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Lentzea tibetensis"
                     /db_xref="taxon:2591470"
     Protein         1..509
                     /product="NAD(P)-binding domain-containing protein"
                     /calculated_mol_wt=57852
     Region          11..323
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 midylvvgag paglqlgyfl kkarrsyeii eagpapgtff rtfprhrkli sinkphtgtn
       61 dpelnlrmdw nsllsddpel lftrysdryf pdaddlvryl gdfaaktnln vryntratri
      121 srnghfevld qrgethtarr livstgpskp flpnipgieg veryhtvstd pkdftdqrvl
      181 iigkgnsafe tadnlvetaa vihvvgrssi rmawkshyvg hlravnnnfl dtyqlksqna
      241 vldgnvlkiv kdeegylvtv sfsradevtk dirydrviac tgfrfnadhf aedcrpnlvi
      301 ddrfpeltpe wesanipdly fagtlmqvrd fkkstsgfih gfrycvraqq riferkyhga
      361 dwpstrlpnr pesisnaiir rvnrssalwq qfgqlgdlvv tncdharyye empvgymppt
      421 gfvvtleygp dhdkvdpfdi tvrrpaqnap eqaldaaylh pvirhyrgge lagthhvaen
      481 lendwtsrda hrvplerfla rqlavpsia
//
LOCUS       WP_235921402             285 aa            linear   BCT 02-MAR-2025
DEFINITION  SAM-dependent methyltransferase [Lentzea tibetensis].
ACCESSION   WP_235921402
VERSION     WP_235921402.1
KEYWORDS    RefSeq.
SOURCE      Lentzea tibetensis
  ORGANISM  Lentzea tibetensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Lentzea.
REFERENCE   1  (residues 1 to 285)
  AUTHORS   Rutherford,K., Parson,W.W. and Daggett,V.
  TITLE     The histamine N-methyltransferase T105I polymorphism affects active
            site structure and dynamics
  JOURNAL   Biochemistry 47 (3), 893-901 (2008)
   PUBMED   18154359
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016550.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04672.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Lentzea tibetensis"
                     /db_xref="taxon:2591470"
     Protein         1..285
                     /product="SAM-dependent methyltransferase"
                     /EC_number="2.1.1.-"
                     /calculated_mol_wt=31264
     Region          26..278
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
ORIGIN      
        1 maeiktsqpa aappiwapgd ngqempntar vrdywlggsh hthvdrrmae qftlcaphlp
       61 ylvrthrtfl rrvvthlvhn gvrqfldlgs gvptvgqvhe vaqradpesr vvyvdldpvv
      121 vsesrellag ragtayvqad lcrpeevlka pelravldls qpvavlvidv lhfvpdsadp
      181 aglltayana fgpgthvavs htcqddrmvd avrlfsdiyg fptpsfafrh paevvdllag
      241 feigepgivp lplwrpdqqq hepdrnpeqf hacaalarsr paecr
//
LOCUS       WP_235921452             714 aa            linear   BCT 02-MAR-2025
DEFINITION  discoidin domain-containing protein [Lentzea tibetensis].
ACCESSION   WP_235921452
VERSION     WP_235921452.1
KEYWORDS    RefSeq.
SOURCE      Lentzea tibetensis
  ORGANISM  Lentzea tibetensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Lentzea.
REFERENCE   1  (residues 1 to 714)
  AUTHORS   Baumgartner,S., Hofmann,K., Chiquet-Ehrismann,R. and Bucher,P.
  TITLE     The discoidin domain family revisited: new members from prokaryotes
            and a homology-based fold prediction
  JOURNAL   Protein Sci 7 (7), 1626-1631 (1998)
   PUBMED   9684896
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012956.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00754.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Lentzea tibetensis"
                     /db_xref="taxon:2591470"
     Protein         1..714
                     /product="discoidin domain-containing protein"
                     /calculated_mol_wt=76902
     Region          32..>284
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
     Region          447..562
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
     Region          591..713
                     /region_name="CBM35_pectate_lyase-like"
                     /note="Carbohydrate Binding Module family 35 (CBM35),
                     pectate lyase-like; appended mainly to enzymes that bind
                     mannan (Man), xylan, glucuronic acid (GlcA) and possibly
                     glucans; cd04082"
                     /db_xref="CDD:271148"
     Site            order(593..595,612,615,709)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:271148"
     Site            order(618,620..621,653,676,707)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:271148"
ORIGIN      
        1 mraklrrigv lltaallvvg lspspasaev lhprqdwlra staglflhwg mrtspgytsc
       61 sawenavtsg gwsakywvde akklhaqylv lasfhsrlgy arawpssipg acatkrdflg
      121 elieaaekeg lyvinymtdd pqwhnegghe wldsagysky kgktvnlqer ngfgqfsydn
      181 fvevmqrypk lagfwidndn ayweqnglye rirkdrphyv lsnnnedtpi mdtisneqkt
      241 gmtpsydypq avytaaprli eacfklpsgg pwwyggsnts vdykltlgrl itnagsdvka
      301 lmaetamvng kfpsnqqnfn nfaegylgqi kesllgvhgg gynngglkpg fwndgahgit
      361 tvskanpnlh yihaitkpsg ttlkvrdngy kiskvtnlrt gaavnwtqsa gtltisgvsn
      421 wdqydtvfkv etagkegiip qssytmsssa aganhpaaha adgnyqtywd atgagtvslr
      481 fdlgsakkvs yvalnqreds tthpssgsar iknynvytsn dgsswtnvks gslpnhrgvq
      541 vidlpantta rhirvektst qgkaqlrvde awlgnaypgs gggdpdpepg ryeaesgtit
      601 qgvvesnhag fsgtgfvnyd navggavefk vtaaqagpat ltlrfangta vnrpldinvn
      661 gglaadevaf agtgawttwq svtvtvnlna gentikavat sanggpnldy levg
//
LOCUS       WP_235921566             189 aa            linear   BCT 02-MAR-2025
DEFINITION  macro domain-containing protein [Lentzea tibetensis].
ACCESSION   WP_235921566
VERSION     WP_235921566.1
KEYWORDS    RefSeq.
SOURCE      Lentzea tibetensis
  ORGANISM  Lentzea tibetensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Lentzea.
REFERENCE   1  (residues 1 to 189)
  AUTHORS   Neuvonen,M. and Ahola,T.
  TITLE     Differential activities of cellular and viral macro domain proteins
            in binding of ADP-ribose metabolites
  JOURNAL   J Mol Biol 385 (1), 212-225 (2009)
   PUBMED   18983849
REFERENCE   2  (residues 1 to 189)
  AUTHORS   Ahel,I., Ahel,D., Matsusaka,T., Clark,A.J., Pines,J., Boulton,S.J.
            and West,S.C.
  TITLE     Poly(ADP-ribose)-binding zinc finger motifs in DNA
            repair/checkpoint proteins
  JOURNAL   Nature 451 (7174), 81-85 (2008)
   PUBMED   18172500
REFERENCE   3  (residues 1 to 189)
  AUTHORS   Hassa,P.O., Haenni,S.S., Elser,M. and Hottiger,M.O.
  TITLE     Nuclear ADP-ribosylation reactions in mammalian cells: where are we
            today and where are we going?
  JOURNAL   Microbiol Mol Biol Rev 70 (3), 789-829 (2006)
   PUBMED   16959969
REFERENCE   4  (residues 1 to 189)
  AUTHORS   Egloff,M.P., Malet,H., Putics,A., Heinonen,M., Dutartre,H.,
            Frangeul,A., Gruez,A., Campanacci,V., Cambillau,C., Ziebuhr,J.,
            Ahola,T. and Canard,B.
  TITLE     Structural and functional basis for ADP-ribose and poly(ADP-ribose)
            binding by viral macro domains
  JOURNAL   J Virol 80 (17), 8493-8502 (2006)
   PUBMED   16912299
REFERENCE   5  (residues 1 to 189)
  AUTHORS   Allen,M.D., Buckle,A.M., Cordell,S.C., Lowe,J. and Bycroft,M.
  TITLE     The crystal structure of AF1521 a protein from Archaeoglobus
            fulgidus with homology to the non-histone domain of macroH2A
  JOURNAL   J Mol Biol 330 (3), 503-511 (2003)
   PUBMED   12842467
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01661.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Lentzea tibetensis"
                     /db_xref="taxon:2591470"
     Protein         1..189
                     /product="macro domain-containing protein"
                     /calculated_mol_wt=19821
     Region          <35..178
                     /region_name="Macro_SF"
                     /note="macrodomain superfamily; cl00019"
                     /db_xref="CDD:469581"
     Site            order(49,61,63,110,157..164)
                     /site_type="other"
                     /note="putative ADP-ribose binding site [chemical
                     binding]"
                     /db_xref="CDD:394871"
ORIGIN      
        1 mpvlapelvl caveqplasa wlavadgrpg vrvhpgsvld ieaqavvspa nsqgwmrggi
       61 davyarafph veqhvrsavl ayhggelpvg eaqivatgee epawlisapt mrrpgehlps
      121 etvhpylaar avlrlwqegr ledgrpirtv vrtiampglg tgvggvapet cahqvaaawd
      181 evfsslgvg
//
LOCUS       WP_235921586             177 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5919 domain-containing protein [Lentzea tibetensis].
ACCESSION   WP_235921586
VERSION     WP_235921586.1
KEYWORDS    RefSeq.
SOURCE      Lentzea tibetensis
  ORGANISM  Lentzea tibetensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Lentzea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039589.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19319.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Lentzea tibetensis"
                     /db_xref="taxon:2591470"
     Protein         1..177
                     /product="DUF5919 domain-containing protein"
                     /calculated_mol_wt=19986
     Region          52..174
                     /region_name="DUF5919"
                     /note="Domain of unknown function (DUF5919); pfam19319"
                     /db_xref="CDD:437151"
ORIGIN      
        1 meiteselak lyphrnnipa dmwdhlitna tetvevlvha gifleerptf vrdlarkagn
       61 garirlvfgd pasrevarrs deeqlgkgtl gshtrnalaf yrplvdvdgi emrfhkttly
      121 nsifrsddem iintrvfgfq gahapalhlr rlaagdlfet ysesfehvwn lsksatf
//
LOCUS       WP_235921592             515 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase [Lentzea tibetensis].
ACCESSION   WP_235921592
VERSION     WP_235921592.1
KEYWORDS    RefSeq.
SOURCE      Lentzea tibetensis
  ORGANISM  Lentzea tibetensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Lentzea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Lentzea tibetensis"
                     /db_xref="taxon:2591470"
     Protein         1..515
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=53020
     Region          42..104
                     /region_name="Inhibitor_I9"
                     /note="Peptidase inhibitor I9; pfam05922"
                     /db_xref="CDD:428674"
     Region          119..375
                     /region_name="Peptidases_S8_PCSK9_ProteinaseK_like"
                     /note="Peptidase S8 family domain in ProteinaseK-like
                     proteins; cd04077"
                     /db_xref="CDD:173790"
     Site            order(122,125..126)
                     /site_type="other"
                     /note="calcium binding site 2 [ion binding]"
                     /db_xref="CDD:173790"
     Site            order(150,183,242..243,270,337,340)
                     /site_type="active"
                     /db_xref="CDD:173790"
     Site            order(150,183,340)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173790"
     Site            order(289,291,314)
                     /site_type="other"
                     /note="calcium binding site 1 [ion binding]"
                     /db_xref="CDD:173790"
     Region          437..515
                     /region_name="P_proprotein"
                     /note="Proprotein convertase P-domain; pfam01483"
                     /db_xref="CDD:460225"
ORIGIN      
        1 mlvsrvatal ttvaigltav vgvagatdep irptigtpvr dryivvledn ltmsstnaas
       61 dltrrhggkl rqawsaalng fslditeera qriaaddrva yveqvvevnv tdtqagatwg
      121 ldrldqkalp ldakynygtt asnvtayild tgirtshvdf ggrasvgyda vgdtykgqdc
      181 qghgthvagt vggatygvak raklvavrvl ncqgsgtsem iinginwvtq navkpavvnm
      241 slgggansai dqavrnsvas gityavaagn gdaagvhqda ctlsparvse aitvgaidkt
      301 dtkasfsnyg tcldvfapgv siasstiasd tstglmsgts matphvagaa alylainpna
      361 tpmqvrdalv ngavsgvvkn amtgspnkel htsglavvpp psvfststdv kipgtgtvls
      421 pltvigrtgn apttlkvtvt ikhtargdlv ldlvapdgsa yrmqnststd ttdnltatyt
      481 vnasselang vwnlkvqdvs rpkdlgyids wqltf
//
LOCUS       WP_235921600             126 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Lentzea tibetensis].
ACCESSION   WP_235921600
VERSION     WP_235921600.1
KEYWORDS    RefSeq.
SOURCE      Lentzea tibetensis
  ORGANISM  Lentzea tibetensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Lentzea.
REFERENCE   1  (residues 1 to 126)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 126)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13669.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Lentzea tibetensis"
                     /db_xref="taxon:2591470"
     Protein         1..126
                     /product="VOC family protein"
                     /calculated_mol_wt=13912
     Region          3..125
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mtlhhvelwv pdmaraestl gwlltalgwt eyqrwsagvs wkmdrtyvvv eqspamtggh
       61 drmraglnhl alhagtraev davteqalsh gwtlmfadrh phaggddhya aylensdgfe
      121 velvaa
//
LOCUS       WP_235921637            1007 aa            linear   BCT 02-MAR-2025
DEFINITION  family 78 glycoside hydrolase catalytic domain [Lentzea
            tibetensis].
ACCESSION   WP_235921637
VERSION     WP_235921637.1
KEYWORDS    RefSeq.
SOURCE      Lentzea tibetensis
  ORGANISM  Lentzea tibetensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Lentzea.
REFERENCE   1  (residues 1 to 1007)
  AUTHORS   Zverlov,V.V., Hertel,C., Bronnenmeier,K., Hroch,A., Kellermann,J.
            and Schwarz,W.H.
  TITLE     The thermostable alpha-L-rhamnosidase RamA of Clostridium
            stercorarium: biochemical characterization and primary structure of
            a bacterial alpha-L-rhamnoside hydrolase, a new type of inverting
            glycoside hydrolase
  JOURNAL   Mol Microbiol 35 (1), 173-179 (2000)
   PUBMED   10632887
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017410.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05592.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1007
                     /organism="Lentzea tibetensis"
                     /db_xref="taxon:2591470"
     Protein         1..1007
                     /product="family 78 glycoside hydrolase catalytic domain"
                     /calculated_mol_wt=110198
     Region          25..1006
                     /region_name="rhamnosid_Stmyc"
                     /note="alpha-L-rhamnosidase; NF041573"
                     /db_xref="CDD:469458"
ORIGIN      
        1 mrrrdflktp avgvalsapl fsagsrlrvt gttveyadal lgtdverprl swvlaadgtg
       61 vrqtayeiev dgwssgkvds getvgiaygg palrprtryh wrvrvwdgdg casewsersw
      121 wetgllgapw qarwigaada spslagaswi wsgdpvgtrw frgvvtvpdn vvtlvatadd
      181 dftlfvdgre vlrspetadg wkigrraevt ggrlvvaarv tnragnggfl lrlgnspvtg
      241 wkasatevpg weqpgfddga wpeatvlhpy gqgpwgsgvt veedpgpllr kefvlakpvs
      301 rarlyisgma yheteinglr vgdrvlepgf tdydrtvlys vhdvtsslrp ggnaigvalg
      361 rgfygmrtpn vfgwerpswh geprllaqle ishpdgtttt vasdgtwrvt agptrsnsly
      421 tgetydarla psgwtspgfd drewepvvpm aapkgvvraq ehepirvvet vtpagvseps
      481 pgvvvadmgr tmsgwtritv dapagtvvrl lhgetlnpdg tvrmanryvt gprqqldeyv
      541 cggaretwep rfsykgfryv qvtgarpvel agrvvhsdvr kvsafrcsep lferydaamr
      601 rtvtnnlhdi ptdtpvfekn gwtgdaqlga psmlaefgma rfltkwigdl adsqeqsgql
      661 plivpsggwg gkemspapew ttvypfllre myrvyadtrv aerhwpalvr yldweiarlr
      721 dglavtalgd yhppgvpgvp pedtrltatt ylyrglvlta elgevigktt ryrsvadgll
      781 ktfnatfldp sghyrtakdp gyrqtsnavp lafgmvppgs vaavagrlad elkargnrld
      841 vgclgahvll qalsdngyad lahavaaera hpswgywfdn gadtmwemwd tatrsrnhyy
      901 kgtvvewlyt riaglrpgda gfrtftvrpe itkvswarmd fesvrgrisv awsvvdgrmr
      961 ltvevpvgst aeihvpgste apagarhlrt drgyhvfsap qgrwtfg
//
LOCUS       WP_235921638             299 aa            linear   BCT 02-MAR-2025
DEFINITION  SRPBCC family protein [Lentzea tibetensis].
ACCESSION   WP_235921638
VERSION     WP_235921638.1
KEYWORDS    RefSeq.
SOURCE      Lentzea tibetensis
  ORGANISM  Lentzea tibetensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Lentzea.
REFERENCE   1  (residues 1 to 299)
  AUTHORS   Iyer,L.M., Koonin,E.V. and Aravind,L.
  TITLE     Adaptations of the helix-grip fold for ligand binding and catalysis
            in the START domain superfamily
  JOURNAL   Proteins 43 (2), 134-144 (2001)
   PUBMED   11276083
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10604.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Lentzea tibetensis"
                     /db_xref="taxon:2591470"
     Protein         1..299
                     /product="SRPBCC family protein"
                     /calculated_mol_wt=32474
     Region          157..295
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(157,159,161,170..172,174..175,190,196,198,200,202,
                     219,221,223,227,244..245,247,251,257,259,261,263,276..280,
                     282..283,286..288,291)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176874"
ORIGIN      
        1 mvsqllgiyl ndhlagatag velarrvsar ntelrdlard vaddrlallr lmreldvpvr
       61 rhkaaagwva gklgqikpng rllsrsplsd lveleamrlg iegksalwra vrelkdvepa
      121 afdrllsrae sqarvvedar vraaetafss pvagvdvtrt ftvgtapdev adylrdfsrt
      181 eqwdpgtvsc tridtgpvav garwrnvsmf lgrktelvyv ltrsepdrlr fvgtnktats
      241 tddlsfsage spgtteiayh ahvelnglar lgtpvakiam eklgsdteks ltrilgagr
//
LOCUS       WP_235921650             445 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome P450 [Lentzea tibetensis].
ACCESSION   WP_235921650
VERSION     WP_235921650.1
KEYWORDS    RefSeq.
SOURCE      Lentzea tibetensis
  ORGANISM  Lentzea tibetensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Lentzea.
REFERENCE   1  (residues 1 to 445)
  AUTHORS   Werck-Reichhart,D. and Feyereisen,R.
  TITLE     Cytochromes P450: a success story
  JOURNAL   Genome Biol 1 (6), REVIEWS3003 (2000)
   PUBMED   11178272
REFERENCE   2  (residues 1 to 445)
  AUTHORS   Graham-Lorence,S., Amarneh,B., White,R.E., Peterson,J.A. and
            Simpson,E.R.
  TITLE     A three-dimensional model of aromatase cytochrome P450
  JOURNAL   Protein Sci 4 (6), 1065-1080 (1995)
   PUBMED   7549871
REFERENCE   3  (residues 1 to 445)
  AUTHORS   Degtyarenko,K.N. and Archakov,A.I.
  TITLE     Molecular evolution of P450 superfamily and P450-containing
            monooxygenase systems
  JOURNAL   FEBS Lett 332 (1-2), 1-8 (1993)
   PUBMED   8405421
REFERENCE   4  (residues 1 to 445)
  AUTHORS   Nelson,D.R., Kamataki,T., Waxman,D.J., Guengerich,F.P.,
            Estabrook,R.W., Feyereisen,R., Gonzalez,F.J., Coon,M.J.,
            Gunsalus,I.C., Gotoh,O. et al.
  TITLE     The P450 superfamily: update on new sequences, gene mapping,
            accession numbers, early trivial names of enzymes, and nomenclature
  JOURNAL   DNA Cell Biol 12 (1), 1-51 (1993)
   PUBMED   7678494
REFERENCE   5  (residues 1 to 445)
  AUTHORS   Guengerich,F.P.
  TITLE     Reactions and significance of cytochrome P-450 enzymes
  JOURNAL   J Biol Chem 266 (16), 10019-10022 (1991)
   PUBMED   2037557
REFERENCE   6  (residues 1 to 445)
  AUTHORS   Nebert,D.W. and Gonzalez,F.J.
  TITLE     P450 genes: structure, evolution, and regulation
  JOURNAL   Annu Rev Biochem 56, 945-993 (1987)
   PUBMED   3304150
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00067.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Lentzea tibetensis"
                     /db_xref="taxon:2591470"
     Protein         1..445
                     /product="cytochrome P450"
                     /GO_function="GO:0004497 - monooxygenase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=49299
     Region          33..438
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(96,100,107,150,248..249,252..253,256..257,260,311,
                     320,322,345,380..382,386..390,393..394)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410668"
     Site            order(174..175,248,251..252,256,318..321)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410668"
ORIGIN      
        1 msrlpkmvsg akpvighlte fhrspeelfr rgraehgdmf tfalpgghka vallgpersr
       61 lffaetdral svrpaypfia rmfapdfffv apfdeyrrqr qiilprfqgr qldgyvtamd
      121 aeavalieql gdageftvtd hfaplaaria arcflgrdla aaidqdffae frrfsggias
      181 fprgdwplpk firgkrarnr lrvilgdlia errkapldpp dflqtiaeah ypdgspvpdl
      241 vlinlillli vgghettagh mswalldllg nprelasats esaevlagng fcdfasvkpl
      301 rhldlcllet erlhpvanll vrealaplev dgttipagtv mfvspavshr ladlwpepda
      361 frperfagee gklarqmlig fgggthrcig lhfahlemki vlarllthfd melvdgppqp
      421 vrgfrakwpa spcrvryrar vtspv
//
LOCUS       WP_235921685             506 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Lentzea tibetensis].
ACCESSION   WP_235921685
VERSION     WP_235921685.1
KEYWORDS    RefSeq.
SOURCE      Lentzea tibetensis
  ORGANISM  Lentzea tibetensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Lentzea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Lentzea tibetensis"
                     /db_xref="taxon:2591470"
     Protein         1..506
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=54392
     Region          36..479
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mpsllppvll gaalvvagct dnsapdgnpd ttgqsivlad rdepttlnpl fgygrqgask
       61 iydglvehrq dgslrpqlaa depvpsvdgl twtvklrgdv kftdgsafga edvvatyqam
      121 ldpavgstar tsfstlkave qvdpstvrfa ltqphaafph llvlgmmpse hvgkdvppig
      181 tgpykvvewk kgdrlllesn agyfdgepki kkltvvfvad dntrarrmqd gefdgtvlpp
      241 klaagftgks glqvlshrga dyravslpga gpvtgnrevr ialnyavnrq givdsllegk
      301 gtaastpvpe alpevfepsa kfrydkteae rqlevagwvr gtdgirarng vparftlmyp
      361 lgddlradla tafaadarav gvdvqlagls weaitprlgv dallsgegnp fdadlmlydl
      421 rgqgnpqvdv aledgrrltd pgqravaykq fqrayvvepc mvvlafpehs yvvrdkwngy
      481 lpvvdpssyg algwgpwwni qkwepk
//
LOCUS       WP_235921718             268 aa            linear   BCT 02-MAR-2025
DEFINITION  NPCBM/NEW2 domain-containing protein [Lentzea tibetensis].
ACCESSION   WP_235921718
VERSION     WP_235921718.1
KEYWORDS    RefSeq.
SOURCE      Lentzea tibetensis
  ORGANISM  Lentzea tibetensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Lentzea.
REFERENCE   1  (residues 1 to 268)
  AUTHORS   Kaur,G., Iyer,L.M., Burroughs,A.M. and Aravind,L.
  TITLE     Bacterial death and TRADD-N domains help define novel apoptosis and
            immunity mechanisms shared by prokaryotes and metazoans
  JOURNAL   Elife 10, e70394 (2021)
   PUBMED   34061031
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 268)
  AUTHORS   Rigden,D.J.
  TITLE     Analysis of glycoside hydrolase family 98: catalytic machinery,
            mechanism and a novel putative carbohydrate binding module
  JOURNAL   FEBS Lett 579 (25), 5466-5472 (2005)
   PUBMED   16212961
REFERENCE   3  (residues 1 to 268)
  AUTHORS   Naumov,D.G.
  TITLE     [Phylogenetic analysis of alpha-galactosidases of the GH27 family]
  JOURNAL   Mol Biol (Mosk) 38 (3), 463-476 (2004)
   PUBMED   15285616
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019908.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08305.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Lentzea tibetensis"
                     /db_xref="taxon:2591470"
     Protein         1..268
                     /product="NPCBM/NEW2 domain-containing protein"
                     /calculated_mol_wt=26893
     Region          <143..258
                     /region_name="NPCBM"
                     /note="NPCBM/NEW2 domain; cl07060"
                     /db_xref="CDD:447217"
ORIGIN      
        1 mgvvadvsav vallgqgikp vlvvalaval lagigalllp nklfkaggvl livaslvvgv
       61 fvvgtplgda asgrsggtta ssapdssqqp tttvtttaep issststlgt tqsaagqpts
      121 kasgptwyvl tahqpvafgn ghnsvntiti gaqsypdsir atypssaadp nnrrtwltgg
      181 nctklsawvg kdagsprtsg tgrfvvqaee aemaaveati stpaqhmdvd itgvvrltlf
      241 dtrggsaday nawgtprvfc stppgksr
//
LOCUS       WP_235921740             261 aa            linear   BCT 02-MAR-2025
DEFINITION  enoyl-CoA hydratase-related protein [Lentzea tibetensis].
ACCESSION   WP_235921740
VERSION     WP_235921740.1
KEYWORDS    RefSeq.
SOURCE      Lentzea tibetensis
  ORGANISM  Lentzea tibetensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Lentzea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012596.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00378.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Lentzea tibetensis"
                     /db_xref="taxon:2591470"
     Protein         1..261
                     /product="enoyl-CoA hydratase-related protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=27141
     Region          1..261
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     Site            order(23,25,57,61..65,108,110..112,134..135,138)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(63,112)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(92,100,121..124,136..139,145,147..149,151..152,
                     157..158,160..161,163..164,167,178,181,196,199..200)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
ORIGIN      
        1 mpelliedad gvrtltfnrp dsfnaftial keqflaalqd asadpsvrav vltgagrafc
       61 agqdlkehia lleagdpspl ntvevhynpm vraligmpkp viaavngsaa gagaslayas
      121 dlriagasak flmafanvgl tadsgaswtl prlighgram emmllaqpvg aeealrvgmv
      181 nqvvpdeell stahalasrl aagpttayak ikealaaaad gtledaldae artqadagrt
      241 edhreaveaf vakrrpkfig r
//
LOCUS       WP_235921059              65 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5522 domain-containing protein [Foetidibacter luteolus].
ACCESSION   WP_235921059
VERSION     WP_235921059.1
KEYWORDS    RefSeq.
SOURCE      Foetidibacter luteolus
  ORGANISM  Foetidibacter luteolus
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Foetidibacter.
REFERENCE   1  (residues 1 to 65)
  AUTHORS   Ito,T., Matsubara,D., Tanaka,I., Makiya,K., Tanei,Z.I., Kumagai,Y.,
            Shiu,S.J., Nakaoka,H.J., Ishikawa,S., Isagawa,T., Morikawa,T.,
            Shinozaki-Ushiku,A., Goto,Y., Nakano,T., Tsuchiya,T., Tsubochi,H.,
            Komura,D., Aburatani,H., Dobashi,Y., Nakajima,J., Endo,S.,
            Fukayama,M., Sekido,Y., Niki,T. and Murakami,Y.
  TITLE     Loss of YAP1 defines neuroendocrine differentiation of lung tumors
  JOURNAL   Cancer Sci 107 (10), 1527-1538 (2016)
   PUBMED   27418196
REFERENCE   2  (residues 1 to 65)
  AUTHORS   Schmidt,J., Braggio,E., Kortuem,K.M., Egan,J.B., Zhu,Y.X.,
            Xin,C.S., Tiedemann,R.E., Palmer,S.E., Garbitt,V.M., McCauley,D.,
            Kauffman,M., Shacham,S., Chesi,M., Bergsagel,P.L. and Stewart,A.K.
  TITLE     Genome-wide studies in multiple myeloma identify XPO1/CRM1 as a
            critical target validated using the selective nuclear export
            inhibitor KPT-276
  JOURNAL   Leukemia 27 (12), 2357-2365 (2013)
   PUBMED   23752175
REFERENCE   3  (residues 1 to 65)
  AUTHORS   Chan,C.X., Reyes-Prieto,A. and Bhattacharya,D.
  TITLE     Red and green algal origin of diatom membrane transporters:
            insights into environmental adaptation and cell evolution
  JOURNAL   PLoS One 6 (12), e29138 (2011)
   PUBMED   22195008
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037605.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17653.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Foetidibacter luteolus"
                     /db_xref="taxon:2608880"
     Protein         1..65
                     /product="DUF5522 domain-containing protein"
                     /calculated_mol_wt=7504
     Region          3..46
                     /region_name="DUF5522"
                     /note="Family of unknown function (DUF5522); pfam17653"
                     /db_xref="CDD:435947"
ORIGIN      
        1 msqpmienrd yyfnkeglmv mtaawhlrrg yccgngclhc pydyekvpep kkshllqare
       61 dkpsp
//
LOCUS       WP_235921815             488 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4185 domain-containing protein [Lentzea tibetensis].
ACCESSION   WP_235921815
VERSION     WP_235921815.1
KEYWORDS    RefSeq.
SOURCE      Lentzea tibetensis
  ORGANISM  Lentzea tibetensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Lentzea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025182.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13810.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Lentzea tibetensis"
                     /db_xref="taxon:2591470"
     Protein         1..488
                     /product="DUF4185 domain-containing protein"
                     /calculated_mol_wt=51912
     Region          36..338
                     /region_name="DUF4185"
                     /note="Domain of unknown function (DUF4185); pfam13810"
                     /db_xref="CDD:433495"
     Region          349..457
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; cl19911"
                     /db_xref="CDD:418717"
ORIGIN      
        1 mlahlattal llvstplpgd aqvagliagq gagdinstas ryavhatdlg vmwrdsrgrv
       61 aiafgdtyga gwgghgagpe tadwrfnvla hstdrdladg lsidsmvtdr pghakqilpg
      121 dpsvqevtvi ptaavsvgsr dylhymsvrs wgpagtwttn yaglaysddg gqnwvkpasa
      181 rwanpgsgfq lgamvrkggy vylfgtpngr lgdssvsrvp enavlnlaay qywtgsswrt
      241 gapasavpvm sgqvgelsvq ynsvlgrwva lhldenraai vlrtapdptg pwtggqvvad
      301 gathpglyga flhpdsatss vlhfamsrwd pyhvelmrlp ladvpadrnl vqeggfehrt
      361 gawrvtgqgg vdqglgqahs ganngwvrns tgwndlfqha vvrpgkryrl sgwvrssstt
      421 sdgffgvrrp dgggvvaeqk ygslpayrrl aveftatepr vevfagvwah ngqdtwaqvd
      481 dlllepid
//
LOCUS       WP_235921828             395 aa            linear   BCT 02-MAR-2025
DEFINITION  PPE domain-containing protein [Lentzea tibetensis].
ACCESSION   WP_235921828
VERSION     WP_235921828.1
KEYWORDS    RefSeq.
SOURCE      Lentzea tibetensis
  ORGANISM  Lentzea tibetensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Lentzea.
REFERENCE   1  (residues 1 to 395)
  AUTHORS   Strong,M., Sawaya,M.R., Wang,S., Phillips,M., Cascio,D. and
            Eisenberg,D.
  TITLE     Toward the structural genomics of complexes: crystal structure of a
            PE/PPE protein complex from Mycobacterium tuberculosis
  JOURNAL   Proc Natl Acad Sci U S A 103 (21), 8060-8065 (2006)
   PUBMED   16690741
REFERENCE   2  (residues 1 to 395)
  AUTHORS   Cole,S.T., Brosch,R., Parkhill,J., Garnier,T., Churcher,C.,
            Harris,D., Gordon,S.V., Eiglmeier,K., Gas,S., Barry,C.E. 3rd,
            Tekaia,F., Badcock,K., Basham,D., Brown,D., Chillingworth,T.,
            Connor,R., Davies,R., Devlin,K., Feltwell,T., Gentles,S.,
            Hamlin,N., Holroyd,S., Hornsby,T., Jagels,K., Krogh,A., McLean,J.,
            Moule,S., Murphy,L., Oliver,K., Osborne,J., Quail,M.A.,
            Rajandream,M.A., Rogers,J., Rutter,S., Seeger,K., Skelton,J.,
            Squares,R., Squares,S., Sulston,J.E., Taylor,K., Whitehead,S. and
            Barrell,B.G.
  TITLE     Deciphering the biology of Mycobacterium tuberculosis from the
            complete genome sequence
  JOURNAL   Nature 393 (6685), 537-544 (1998)
   PUBMED   9634230
  REMARK    Erratum:[Nature 1998 Nov 12;396(6707):190]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013021.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00823.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Lentzea tibetensis"
                     /db_xref="taxon:2591470"
     Protein         1..395
                     /product="PPE domain-containing protein"
                     /calculated_mol_wt=39278
     Region          6..>206
                     /region_name="PPE"
                     /note="PPE-repeat protein [Function unknown]; COG5651"
                     /db_xref="CDD:444372"
ORIGIN      
        1 mvehrwqgys heelyksina gpgpsashas merwagvsaa lteingdlha gitgsgaswe
       61 gkaadvarag lnplatwadd artgsevmri saelqadhis karsdmpppv avtaeqpnal
      121 vsglthlfgg qtdhekqeqa adaaenrare vmstyasstt antstlgqfh qppqlvinas
      181 gpvradgpgv mgaapvfglg shgtagvpar ragsaagrga avpparsasg pgststsgst
      241 trtsgapavh tsggstsvss asggagsvgt sgavvpgqaq rkvakkdqla pdstaasssa
      301 agavvagqqa avaqnsaapl mggagtiggg ssdtvhkrtv apappafdpf ggmgarrdee
      361 eeetvhqaad ylretddiyg vgsytlpvig esttd
//
LOCUS       WP_235921919              80 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma factor [Flavobacterium phycosphaerae].
ACCESSION   WP_235921919
VERSION     WP_235921919.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium phycosphaerae
  ORGANISM  Flavobacterium phycosphaerae
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 80)
  AUTHORS   Campbell,E.A., Muzzin,O., Chlenov,M., Sun,J.L., Olson,C.A.,
            Weinman,O., Trester-Zedlitz,M.L. and Darst,S.A.
  TITLE     Structure of the bacterial RNA polymerase promoter specificity
            sigma subunit
  JOURNAL   Mol Cell 9 (3), 527-539 (2002)
   PUBMED   11931761
REFERENCE   2  (residues 1 to 80)
  AUTHORS   Malhotra,A., Severinova,E. and Darst,S.A.
  TITLE     Crystal structure of a sigma 70 subunit fragment from E. coli RNA
            polymerase
  JOURNAL   Cell 87 (1), 127-136 (1996)
   PUBMED   8858155
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04542.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Flavobacterium phycosphaerae"
                     /db_xref="taxon:2697515"
     Protein         1..80
                     /product="sigma factor"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=9097
     Region          16..>69
                     /region_name="Sig70_bacteroi1"
                     /note="RNA polymerase sigma-70 factor, Bacteroides
                     expansion family 1; TIGR02985"
                     /db_xref="CDD:274376"
ORIGIN      
        1 msesnpnakl csdavfrsvf dtnfkvlrnf lvykfrgdie taedvaqnaf vklwencsll
       61 kpeqaksfyt pqpsdfrlit
//
LOCUS       WP_235921967             625 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Flavobacterium
            phycosphaerae].
ACCESSION   WP_235921967
VERSION     WP_235921967.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium phycosphaerae
  ORGANISM  Flavobacterium phycosphaerae
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 625)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Flavobacterium phycosphaerae"
                     /db_xref="taxon:2697515"
     Protein         1..625
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=67875
     Region          <132..625
                     /region_name="Fiu"
                     /note="Outer membrane receptor for monomeric catechols
                     [Inorganic ion transport and metabolism]; COG4774"
                     /db_xref="CDD:443806"
ORIGIN      
        1 matsfgldyn dfrtdleyga rigdglyfha ggfyrtgegv rspgfvanng gqvkfnvtke
       61 fekgsvtvya kflndraaaf mpmpmqvsgt naspnwgsis gydatsgamq svyldynvgl
      121 gpngelrrdk vsdgmhpvsk sigasatfel adgwkvtdng rfssnsgafv apfpaevata
      181 gtiansfgag stlayandgt pfnnpnglva rihmfdtqln nmdnfmndlr itkkfdkvgv
      241 tagyfksiqn ismswlwnsy lqevsdnnpr linvfdaggn plsvnglyay gvpawgncct
      301 rnydtqynvs apyanvsfda tdklsleagv rydkgqvngs fagssqtayd inndgvisap
      361 essvsainta nttavdyqyh yvsysfgany lidaqqsvfa rysrgasaka drilfsglny
      421 ldgdkmntld ylnqaeigyk rkftkgyvya tlfssktneq ggyeatsnsi idndyksmgl
      481 eletsynata nlnlrggfty tkaeitsgan dgndprrqpk mmynfiptyk fsqnknavgl
      541 sfigqtkayt qdsnqlvmdg fmivngfvev tvtkglslnl agnnlfntla iteaeegnit
      601 entvnyvrar plpgrsvsma lsykf
//
LOCUS       WP_235922062             373 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Lentzea tibetensis].
ACCESSION   WP_235922062
VERSION     WP_235922062.1
KEYWORDS    RefSeq.
SOURCE      Lentzea tibetensis
  ORGANISM  Lentzea tibetensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Lentzea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024917.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13527.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Lentzea tibetensis"
                     /db_xref="taxon:2591470"
     Protein         1..373
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /calculated_mol_wt=40353
     Region          1..>226
                     /region_name="Eis"
                     /note="Predicted acetyltransferase [General function
                     prediction only]; COG4552"
                     /db_xref="CDD:443616"
ORIGIN      
        1 meirtarpsd ldqiaallta rgepedaadh rlvvedpdag weacavavdg drvvstatll
       61 detvvlggve iptgqvelva tdveyegrgl vralmdwahq rsadrghllq vmigipyfyr
      121 qfgysystpm plprpvqsvp tgedlvrear lsdipdlvrl qdiaqsgvel rvprsaacwr
      181 wviaqpgssl hvatradqvv gcarmaedtm hefvaldsda amsllslapa tvdarpglal
      241 daflgppsgq lqefyfrips aaallehlrp llarrlagfd dtdvlvsffr shvrfawqdg
      301 evgpvrpggt lqgpysqgga gvapdllapl lfgphgmagl rqrhsdcypg phaelmealf
      361 ppvtsdlllw ylp
//
LOCUS       WP_235922108             232 aa            linear   BCT 02-MAR-2025
DEFINITION  heparin lyase I family protein [Lentzea tibetensis].
ACCESSION   WP_235922108
VERSION     WP_235922108.1
KEYWORDS    RefSeq.
SOURCE      Lentzea tibetensis
  ORGANISM  Lentzea tibetensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Lentzea.
REFERENCE   1  (residues 1 to 232)
  AUTHORS   Han,Y.H., Garron,M.L., Kim,H.Y., Kim,W.S., Zhang,Z., Ryu,K.S.,
            Shaya,D., Xiao,Z., Cheong,C., Kim,Y.S., Linhardt,R.J., Jeon,Y.H.
            and Cygler,M.
  TITLE     Structural snapshots of heparin depolymerization by heparin lyase I
  JOURNAL   J Biol Chem 284 (49), 34019-34027 (2009)
   PUBMED   19801541
REFERENCE   2  (residues 1 to 232)
  AUTHORS   Konno,N., Ishida,T., Igarashi,K., Fushinobu,S., Habu,N.,
            Samejima,M. and Isogai,A.
  TITLE     Crystal structure of polysaccharide lyase family 20
            endo-beta-1,4-glucuronan lyase from the filamentous fungus
            Trichoderma reesei
  JOURNAL   FEBS Lett 583 (8), 1323-1326 (2009)
   PUBMED   19306878
REFERENCE   3  (residues 1 to 232)
  AUTHORS   Konno,N., Igarashi,K., Habu,N., Samejima,M. and Isogai,A.
  TITLE     Cloning of the Trichoderma reesei cDNA encoding a glucuronan lyase
            belonging to a novel polysaccharide lyase family
  JOURNAL   Appl Environ Microbiol 75 (1), 101-107 (2009)
   PUBMED   18978091
REFERENCE   4  (residues 1 to 232)
  AUTHORS   Ernst,S., Venkataraman,G., Winkler,S., Godavarti,R., Langer,R.,
            Cooney,C.L. and Sasisekharan,R.
  TITLE     Expression in Escherichia coli, purification and characterization
            of heparinase I from Flavobacterium heparinum
  JOURNAL   Biochem J 315 (Pt 2) (Pt 2), 589-597 (1996)
   PUBMED   8615834
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025464.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14099.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Lentzea tibetensis"
                     /db_xref="taxon:2591470"
     Protein         1..232
                     /product="heparin lyase I family protein"
                     /calculated_mol_wt=25678
     Region          23..206
                     /region_name="Alginate_lyase2"
                     /note="Alginate lyase; cl21738"
                     /db_xref="CDD:451375"
ORIGIN      
        1 mrvlgavlva llmmatpaha amiwtgdpar gtavfgnmnc dspgsvtavt dpakgrvwry
       61 tkpgssnrce nhgisvngkr yvfkggetyw lgwhskltna annnatfqwk sygnhkqnfp
      121 vvlkmingri hmlhsplggs drliwsapvk adewhhfaig lflspdtnkg wveiyfdgqq
      181 qtftnntkry vartlddine pkwgiyggrg qnmtnfvadl rvgttysdva sr
//
LOCUS       WP_235922196             228 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Lentzea tibetensis].
ACCESSION   WP_235922196
VERSION     WP_235922196.1
KEYWORDS    RefSeq.
SOURCE      Lentzea tibetensis
  ORGANISM  Lentzea tibetensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Lentzea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12697.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Lentzea tibetensis"
                     /db_xref="taxon:2591470"
     Protein         1..228
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=24526
     Region          4..>159
                     /region_name="YvaK"
                     /note="Esterase/lipase [Secondary metabolites
                     biosynthesis, transport and catabolism]; COG1647"
                     /db_xref="CDD:441253"
     Region          4..>72
                     /region_name="EstA"
                     /note="Triacylglycerol esterase/lipase EstA, alpha/beta
                     hydrolase fold [Lipid transport and metabolism]; COG1075"
                     /db_xref="CDD:440693"
ORIGIN      
        1 mstvvlvhsp flgpasmrpl adalaaqgwp vllmdlqmtv neapvhqrli gafadaleds
       61 lvtddivlvg hsgagpllps fadalettvs givyldsdlp tpgrswrdtv paplvthiks
      121 rvragklprw dlwfdtdpla elvasdalra slrdevpevs weflkeqrps vawlgpsgyv
      181 qlssaydeaa leaeardwpv qrvglhhlam atdpevvata lnavlskl
//
LOCUS       WP_235922413             220 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase [Flavobacterium difficile].
ACCESSION   WP_235922413
VERSION     WP_235922413.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium difficile
  ORGANISM  Flavobacterium difficile
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017026.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05175.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Flavobacterium difficile"
                     /db_xref="taxon:2709659"
     Protein         1..220
                     /product="methyltransferase"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=25429
     Region          36..219
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(69..75,91..92,116..118,133)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
ORIGIN      
        1 mrnfikkith pflkyglklf yskprtycyd nicikvhpdv fpphltistk illdfikpin
       61 lktktllelg cgsgiislla aqkganvtat dinetalnyl klnatknkln vnvvssdlfe
      121 klenntfdyi iinppyypkk aknikeqawf cgenfeyfen lfqqlpsfln qnnfcfmils
      181 qdceiekiiq iaaknhvnfq lifnkksnfe mnyiyqitka
//
LOCUS       WP_235922415             459 aa            linear   BCT 02-MAR-2025
DEFINITION  PQQ-dependent sugar dehydrogenase [Flavobacterium difficile].
ACCESSION   WP_235922415
VERSION     WP_235922415.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium difficile
  ORGANISM  Flavobacterium difficile
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 459)
  AUTHORS   Pallanca,J.E. and Smirnoff,N.
  TITLE     Ascorbic acid metabolism in pea seedlings. A comparison of
            D-glucosone, L-sorbosone, and L-galactono-1,4-lactone as ascorbate
            precursors
  JOURNAL   Plant Physiol 120 (2), 453-462 (1999)
   PUBMED   10364396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019607.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07995.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Flavobacterium difficile"
                     /db_xref="taxon:2709659"
     Protein         1..459
                     /product="PQQ-dependent sugar dehydrogenase"
                     /calculated_mol_wt=49731
     Region          18..369
                     /region_name="YliI"
                     /note="Glucose/arabinose dehydrogenase, beta-propeller
                     fold [Carbohydrate transport and metabolism]; COG2133"
                     /db_xref="CDD:441736"
     Region          385..458
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     pfam18962"
                     /db_xref="CDD:436869"
ORIGIN      
        1 msvmkttisi illflfnltf aqtlslqsfs tgftspveit hagdsrlfvv eqtgrikiln
       61 sngsvnatpf lnisslistn afergllgla fhpnyatngf ffvnytntag ntviarysvs
      121 anpnvanttg tilltvnqpf dnhnggslkf gpdgylyigm gdggsggdpg nraqninenl
      181 gkmlridvns tvapfytnpp tnpyvgiagn deiwaiglrn pwkftfdklt gdlwiadvgq
      241 safeevnkva ptlanvnygw rcfeansvyn nagncatitg ttaplvavnh ttgacsitgg
      301 yvyrgttypn lvgkylfsdy clgkigitts tgtttysatf pgnfasfged vtgelyisdi
      361 tsgtiykivd tslshesfdk nlftiypnpa knilfidtsq snyptkveiy dvngklvlqq
      421 etekiiqnki displskgly fvtiqnesne ysqyklvve
//
LOCUS       WP_235922542             105 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Citrobacter telavivensis].
ACCESSION   WP_235922542
VERSION     WP_235922542.1
KEYWORDS    RefSeq.
SOURCE      Citrobacter telavivensis
  ORGANISM  Citrobacter telavivensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter.
REFERENCE   1  (residues 1 to 105)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Citrobacter telavivensis"
                     /db_xref="taxon:2653932"
     Protein         <1..>105
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <2..>100
                     /region_name="LysR"
                     /note="DNA-binding transcriptional regulator, LysR family
                     [Transcription]; COG0583"
                     /db_xref="CDD:440348"
ORIGIN      
        1 nltaagqall ieaehavrqf daaqlgaqra argesgriel gyvasaaysg mlqqqvsrys
       61 etcpgvrlni relpmaelpg mvrdglldla yvrspmelpe eleai
//
LOCUS       WP_235922545             100 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Citrobacter
            telavivensis].
ACCESSION   WP_235922545
VERSION     WP_235922545.1
KEYWORDS    RefSeq.
SOURCE      Citrobacter telavivensis
  ORGANISM  Citrobacter telavivensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter.
REFERENCE   1  (residues 1 to 100)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Citrobacter telavivensis"
                     /db_xref="taxon:2653932"
     Protein         <1..>100
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          1..>98
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            47..80
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 qlveqtrqhi dslasevqqt smvihqleqh gneidrvlev iqsiaeqtnl lalnaaieaa
       61 rageagrgfa vvadevrgla srtqqstahi kgtidtlrrs
//
LOCUS       WP_235922550              93 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Citrobacter telavivensis].
ACCESSION   WP_235922550
VERSION     WP_235922550.1
KEYWORDS    RefSeq.
SOURCE      Citrobacter telavivensis
  ORGANISM  Citrobacter telavivensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter.
REFERENCE   1  (residues 1 to 93)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Citrobacter telavivensis"
                     /db_xref="taxon:2653932"
     Protein         <1..>93
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          1..>93
                     /region_name="PRK07561"
                     /note="DNA topoisomerase I subunit omega; Validated"
                     /db_xref="CDD:236048"
ORIGIN      
        1 eitkkaiqea fsqpgeldid rvnaqqarrf ldrvvgymvs pllwakiarg lsagrvqsva
       61 vklvverere irafipeeyw eihadlgtak nak
//
LOCUS       WP_235922551              92 aa            linear   BCT 02-MAR-2025
DEFINITION  aconitase family protein, partial [Citrobacter telavivensis].
ACCESSION   WP_235922551
VERSION     WP_235922551.1
KEYWORDS    RefSeq.
SOURCE      Citrobacter telavivensis
  ORGANISM  Citrobacter telavivensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012550.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00330.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Citrobacter telavivensis"
                     /db_xref="taxon:2653932"
     Protein         <1..>92
                     /product="aconitase family protein"
     Region          <1..>92
                     /region_name="PRK09277"
                     /note="aconitate hydratase AcnA"
                     /db_xref="CDD:236445"
ORIGIN      
        1 tianmapeyg atcgffpvdq vtldylrlsg rpeatvqlve hyckaqglwr lpgqeplfsd
       61 slaldmheve asmagpkrpq drvalgqvsq af
//
LOCUS       WP_235922554             207 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: YiiX/YebB-like N1pC/P60 family cysteine hydrolase
            [Flavobacterium].
ACCESSION   WP_235922554
VERSION     WP_235922554.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium
  ORGANISM  Flavobacterium
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae.
REFERENCE   1  (residues 1 to 207)
  AUTHORS   Xu,Q., Rawlings,N.D., Chiu,H.J., Jaroszewski,L., Klock,H.E.,
            Knuth,M.W., Miller,M.D., Elsliger,M.A., Deacon,A.M., Godzik,A.,
            Lesley,S.A. and Wilson,I.A.
  TITLE     Structural analysis of papain-like NlpC/P60 superfamily enzymes
            with a circularly permuted topology reveals potential lipid binding
            sites
  JOURNAL   PLoS One 6 (7), e22013 (2011)
   PUBMED   21799766
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017519.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05708.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Flavobacterium"
                     /db_xref="taxon:237"
     Protein         1..207
                     /product="YiiX/YebB-like N1pC/P60 family cysteine
                     hydrolase"
                     /calculated_mol_wt=23743
     Region          2..153
                     /region_name="Peptidase_C92"
                     /note="Permuted papain-like amidase enzyme, YaeF/YiiX, C92
                     family; cl46416"
                     /db_xref="CDD:480756"
ORIGIN      
        1 mmknkvlili lsfiqfgfaq nvklktgdil fqsmncgplc eainevtagy qgkdfshlgm
       61 vyikndsvfv ieasgkevki tpydtfktyt tdemfvgrlk rkyrkyipea vsfslqqvgv
      121 pyddeylynn gkyycseliy daflhsyqkp lfdlfpmtfk spksneyfev wvdyyeklkm
      181 eipegqlgcn pggistsnkl kiigtlr
//
LOCUS       WP_235922584             298 aa            linear   BCT 02-MAR-2025
DEFINITION  type 1 glutamine amidotransferase domain-containing protein
            [Rugamonas aquatica].
ACCESSION   WP_235922584
VERSION     WP_235922584.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas aquatica
  ORGANISM  Rugamonas aquatica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028434.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17124.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Rugamonas aquatica"
                     /db_xref="taxon:2743357"
     Protein         1..298
                     /product="type 1 glutamine amidotransferase
                     domain-containing protein"
                     /calculated_mol_wt=33419
     Region          21..214
                     /region_name="GAT_1"
                     /note="Type 1 glutamine amidotransferase (GATase1)-like
                     domain; cl00020"
                     /db_xref="CDD:469582"
     Site            159
                     /site_type="active"
                     /note="conserved cys residue [active]"
                     /db_xref="CDD:153222"
ORIGIN      
        1 mnarpfrvha mshsrrilip iplhdfdpte valswrilrd aghhiefatv dgtrghadpl
       61 mlsgegldpw gwlpglrklr lfglmlradh hgrqayaale qdpaflqprr fedlraaqyd
      121 alllpgghak gmrpyledsv lqavvaeffd sgkpvaavch gvllaarsis prtqrsvlyg
      181 rkttaltwkl ersawdltrf larfwdpgyy rtygeskgep agywsveqev kralaspddf
      241 idvpagtpdy frktgglvrd ragddraawv vqdgnylsar wpgdvhtfar ryaamlaa
//
LOCUS       WP_235922356              72 aa            linear   BCT 02-MAR-2025
DEFINITION  FimD/PapC C-terminal domain-containing protein [Citrobacter
            telavivensis].
ACCESSION   WP_235922356
VERSION     WP_235922356.1
KEYWORDS    RefSeq.
SOURCE      Citrobacter telavivensis
  ORGANISM  Citrobacter telavivensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter.
REFERENCE   1  (residues 1 to 72)
  AUTHORS   Ford,B., Rego,A.T., Ragan,T.J., Pinkner,J., Dodson,K.,
            Driscoll,P.C., Hultgren,S. and Waksman,G.
  TITLE     Structural homology between the C-terminal domain of the PapC usher
            and its plug
  JOURNAL   J Bacteriol 192 (7), 1824-1831 (2010)
   PUBMED   20118254
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025319.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13953.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Citrobacter telavivensis"
                     /db_xref="taxon:2653932"
     Protein         1..72
                     /product="FimD/PapC C-terminal domain-containing protein"
                     /calculated_mol_wt=7679
     Region          <3..72
                     /region_name="FimD"
                     /note="Outer membrane usher protein FimD/PapC [Cell
                     motility, Extracellular structures]; COG3188"
                     /db_xref="CDD:442421"
ORIGIN      
        1 mtgktipfga takinnrdna pegivddrqr vwfsgapekg svvvnwages cqasyqiaqv
       61 sdkthnvtae cr
//
LOCUS       WP_235922607             276 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP cone domain-containing protein [Flavobacterium celericrescens].
ACCESSION   WP_235922607
VERSION     WP_235922607.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium celericrescens
  ORGANISM  Flavobacterium celericrescens
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 276)
  AUTHORS   Aravind,L., Wolf,Y.I. and Koonin,E.V.
  TITLE     The ATP-cone: an evolutionarily mobile, ATP-binding regulatory
            domain
  JOURNAL   J Mol Microbiol Biotechnol 2 (2), 191-194 (2000)
   PUBMED   10939243
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03477.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Flavobacterium celericrescens"
                     /db_xref="taxon:2709780"
     Protein         1..276
                     /product="ATP cone domain-containing protein"
                     /calculated_mol_wt=31379
     Region          86..247
                     /region_name="PDDEXK_nuclease-like"
                     /note="PDDEXK family nucleases; cl40440"
                     /db_xref="CDD:477358"
ORIGIN      
        1 mmkvtkysge lvhydeqkli nslrksgadk avaeaivkki eselyegias kkiyklayql
       61 lknisnahaa rynlrtammg lgpagfffek fiakiyqeqk fqtrtnvslk gncisheidv
      121 llkkehtism ieckfhsgqd aktdvkvpmy ilsrfndvkn rkyhlflpne iisdciivtn
      181 nrfttdaiqf gecsglkmls wdyppkkgik eiidlyavyp itclttltqt ekdkllildc
      241 itvkdlvans silnkielsh nriknvlkea nqlttk
//
LOCUS       WP_235922634             102 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2946 family protein [Rugamonas aquatica].
ACCESSION   WP_235922634
VERSION     WP_235922634.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas aquatica
  ORGANISM  Rugamonas aquatica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022610.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11162.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Rugamonas aquatica"
                     /db_xref="taxon:2743357"
     Protein         1..102
                     /product="DUF2946 family protein"
                     /calculated_mol_wt=10636
ORIGIN      
        1 mavlfsalap avsramtpss pygyaeicsv gqdkkspapy dhtaehcpys athggthall
       61 ppamasfavi gghdyypplf ysaprplhsw saakprgppa rs
//
LOCUS       WP_235922679             253 aa            linear   BCT 02-MAR-2025
DEFINITION  PEP-CTERM sorting domain-containing protein [Rugamonas aquatica].
ACCESSION   WP_235922679
VERSION     WP_235922679.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas aquatica
  ORGANISM  Rugamonas aquatica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
REFERENCE   1  (residues 1 to 253)
  AUTHORS   Haft,D.H., Paulsen,I.T., Ward,N. and Selengut,J.D.
  TITLE     Exopolysaccharide-associated protein sorting in environmental
            organisms: the PEP-CTERM/EpsH system. Application of a novel
            phylogenetic profiling heuristic
  JOURNAL   BMC Biol 4, 29 (2006)
   PUBMED   16930487
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019225.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07589.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Rugamonas aquatica"
                     /db_xref="taxon:2743357"
     Protein         1..253
                     /product="PEP-CTERM sorting domain-containing protein"
                     /calculated_mol_wt=26949
ORIGIN      
        1 mnmkdalsgf llsslflags aahaatqlst sgfdleltes vdsssfgmnv vsdengtiki
       61 amrgagapdt alqvdyswrs dgdqaltqls gsvrqgyqit sltlsgtltg llevdtsgvg
      121 ysywnegkat nsakvrwsiw qpdlaplaad wktenlngvt nfsmslalhn tgtfvsnils
      181 lvdvfalcas vtyphgeipi lyrgpsrsei rfgdmmltaq vsavpepety vmllaglglm
      241 algrrvpgrs rrh
//
LOCUS       WP_235922683             447 aa            linear   BCT 02-MAR-2025
DEFINITION  M28 family peptidase [Rugamonas aquatica].
ACCESSION   WP_235922683
VERSION     WP_235922683.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas aquatica
  ORGANISM  Rugamonas aquatica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016289.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04389.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Rugamonas aquatica"
                     /db_xref="taxon:2743357"
     Protein         1..447
                     /product="M28 family peptidase"
                     /calculated_mol_wt=48638
     Region          23..348
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     Region          <369..>441
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
ORIGIN      
        1 mtalsvlava palaagpdtt rhqaqidqiv keisplrieg yinklvgfrt rhtmsdtvse
       61 tegigaarrw ikselercga aqggrlqvaf dshvapvsar isrpteivnv vatlpgtqaa
      121 svdrmyvvsg hydsrntdvm dakgdapgan ddasgtaavm emacvmakyk fdatlvfmtv
      181 aaeeqgllga ahwaelakqk nlniagmftn diigssrdeh gkvdntqvrl faeglpvqke
      241 nsdtvrtliq tggendslsr qlaravkeag eryvpkfkvn viqrrdrylr ggdhmpfler
      301 gyaalrftep aedfnhqhqn irtengvlig dlpqyddfny iaqvarvnaa alsslslapa
      361 apakvqvrta klqndtelvw qanaepdlag yrivwrdtsa aewqgsqfvg kateftlpls
      421 kdnyyfgvqa idtegnaspa syptplr
//
LOCUS       WP_235922750             356 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Rugamonas aquatica].
ACCESSION   WP_235922750
VERSION     WP_235922750.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas aquatica
  ORGANISM  Rugamonas aquatica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Rugamonas aquatica"
                     /db_xref="taxon:2743357"
     Protein         1..356
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=39885
     Region          75..351
                     /region_name="PRK09685"
                     /note="DNA-binding transcriptional activator FeaR;
                     Provisional"
                     /db_xref="CDD:236612"
ORIGIN      
        1 mkhpsshqyt attrrhlsgh rqryalppat geepamainh ftvaneapgl qaqawreyvg
       61 rimdvpvsrs qrkhgfrgei styvlkdlif ldsrtdavcq vrspgyisrd gmrdyvfhva
      121 iegiietevg ggsrkaaqfv pgilaldmnq tmrmmrpasa rvlafflprh vveaaipdae
      181 aihgqvvnys spltrllfdq lmalcrtlst lppseldaal rrcgelilaa fvkqtrlesg
      241 qraavraawq dkirlyidan lyrqdltpeh ilqtfplsrp slyrlfeaeg glaayvrncr
      301 lreaanelvl apetaiaeia rdlafqspah fsrvfrsayg mapldframq ldwlrp
//
LOCUS       WP_235922732             904 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Rugamonas aquatica].
ACCESSION   WP_235922732
VERSION     WP_235922732.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas aquatica
  ORGANISM  Rugamonas aquatica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
REFERENCE   1  (residues 1 to 904)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Rugamonas aquatica"
                     /db_xref="taxon:2743357"
     Protein         1..904
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=101464
     Region          2..290
                     /region_name="TauA"
                     /note="ABC-type nitrate/sulfonate/bicarbonate transport
                     system, periplasmic component [Inorganic ion transport and
                     metabolism]; COG0715"
                     /db_xref="CDD:440479"
     Region          224..903
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mapaaaqdpi tlqlkhshqf qfagyyaave qgyyreagld vrilegsdgn eperdvvsgk
       61 aeygvgassl llarlagkpv vvlgvvfqhs pyalamrqts aepdirriig kramigsltd
      121 elgsadella ylikegipas sferveptfn tadlisgkvd aiavyttnep dtfdrlgfpy
      181 diyspravgi dfygdnlfts ereianhpar vqafraasmr gwqwamshqe emadiilnky
      241 srrsdrahll yearqmvplv qpvlveigyq nperwrhiad vyaglgmvpk hanfdgfmyr
      301 vessgtsllw lyrvlggaal alvlgaaihf sllarerrra svairtgeqr frtmfeaspl
      361 gialvdsity eyrdinpryq eivgrsqvel namrwleagh pedvaqvkqq mgrltmheig
      421 sfkvtnrlfr pdgelvwiev svtaieteag shphhlcmie dvtdkkqsea liwqqanfdp
      481 ltqlpnrrmf hdrlahdmlk sqrdrshiai lfidldhfke vndtlghhqg dillidaarr
      541 isacvrksdt varlggdeft vilselegte rvehiaqhii dslrlpfplg qeqafvsasi
      601 gitlypddal diddllkhad qamyaakgag rnrysyftpt lqvaalnrmr ltndlrgalk
      661 aeqfelyfqp ivhlksgrih kaealirwnh pqrgvvsple fiplaeasgl ivdigewvfr
      721 esarcvqrwr qqhhpefqvs vnqsplefqr edgaydawlr ylqslnlpgq svvveitegl
      781 lldanatvsn kllqlrdagi qvalddfgtg ysslsylkkf didylkidrs ftrnlapdss
      841 dmalsdaiiv mahklglrvi aegvetpeqr dllaaagcdy gqgylfarpm paeqfdqllr
      901 qqav
//
LOCUS       WP_235922751             438 aa            linear   BCT 02-MAR-2025
DEFINITION  M24 family metallopeptidase [Rugamonas aquatica].
ACCESSION   WP_235922751
VERSION     WP_235922751.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas aquatica
  ORGANISM  Rugamonas aquatica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
REFERENCE   1  (residues 1 to 438)
  AUTHORS   Stuwe,T., Hothorn,M., Lejeune,E., Rybin,V., Bortfeld,M.,
            Scheffzek,K. and Ladurner,A.G.
  TITLE     The FACT Spt16 'peptidase' domain is a histone H3-H4 binding module
  JOURNAL   Proc Natl Acad Sci U S A 105 (26), 8884-8889 (2008)
   PUBMED   18579787
REFERENCE   2  (residues 1 to 438)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
REFERENCE   3  (residues 1 to 438)
  AUTHORS   Roderick,S.L. and Matthews,B.W.
  TITLE     Structure of the cobalt-dependent methionine aminopeptidase from
            Escherichia coli: a new type of proteolytic enzyme
  JOURNAL   Biochemistry 32 (15), 3907-3912 (1993)
   PUBMED   8471602
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012766.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00557.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Rugamonas aquatica"
                     /db_xref="taxon:2743357"
     Protein         1..438
                     /product="M24 family metallopeptidase"
                     /calculated_mol_wt=48653
     Region          213..376
                     /region_name="APP_MetAP"
                     /note="A family including aminopeptidase P, aminopeptidase
                     M, and prolidase. Also known as metallopeptidase family
                     M24. This family of enzymes is able to cleave amido-,
                     imido- and amidino-containing bonds. Members exibit
                     relatively narrow substrate specificity...; cl00279"
                     /db_xref="CDD:469704"
ORIGIN      
        1 mkkyllamsl llaaasapaq vlplreqavv vnqllaerfd tllpdmmaqt gidmwivvsr
       61 eynedpvlkt mlpaewlnar rrtvllfyrd patgrvdrla varynvgqsi aaawdmqkyp
      121 dqwqalvali aqrkpnkial dtsrhfghad gidhtdytel laalpaeyra rvvsaeplav
      181 rwletrtahe mqiypqlida thkiiaegfs ervitpgitt tadvvwwfrq kirdlgydtw
      241 fhpsveiqrp sqssaladad vivpgdllhv digitylrln tdvqqhayvl kpgesaappa
      301 lvqafaranr vqdiltaqfr qgrsgnqvla aalaqaraeg lnptiythpi gyhghaagpa
      361 igmwdmqdgv pgsgdealry rtaysielna attlpayaap lrimleeday fdqagvryig
      421 grqkelhlvp rrapniep
//
LOCUS       WP_235922810             459 aa            linear   BCT 02-MAR-2025
DEFINITION  VWA domain-containing protein [Rugamonas aquatica].
ACCESSION   WP_235922810
VERSION     WP_235922810.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas aquatica
  ORGANISM  Rugamonas aquatica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
REFERENCE   1  (residues 1 to 459)
  AUTHORS   Bork,P. and Rohde,K.
  TITLE     More von Willebrand factor type A domains? Sequence similarities
            with malaria thrombospondin-related anonymous protein,
            dihydropyridine-sensitive calcium channel and inter-alpha-trypsin
            inhibitor
  JOURNAL   Biochem J 279 (Pt 3) (Pt 3), 908-910 (1991)
   PUBMED   1659389
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012321.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00092.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Rugamonas aquatica"
                     /db_xref="taxon:2743357"
     Protein         1..459
                     /product="VWA domain-containing protein"
                     /calculated_mol_wt=48671
     Region          5..>84
                     /region_name="TadX"
                     /note="Uncharacterized conserved protein, contains
                     TadX/Tad_C domain [General function prediction only];
                     COG4655"
                     /db_xref="CDD:443693"
     Region          <127..>255
                     /region_name="YfbK"
                     /note="Secreted protein containing bacterial Ig-like
                     domain and vWFA domain [General function prediction only];
                     COG2304"
                     /db_xref="CDD:441879"
ORIGIN      
        1 mqrsrqqgnv iimvalsmav ligvvglaid tgvtymvkdk lnaatdaasl aaaravsqga
       61 dqatqtanak aaagrffaan fppnymgstg kmddpsvvfn sgkvtitvta qasmpvsflk
      121 llgvsplkpg vvsqtvrkdl dmvvvldtsg slsgsganvi tsattflkqf nadqdrvgll
      181 hfsygavidd pirptargfd rdsminhikn ysfsgstasp eglywarqql nsvptanlnr
      241 snlrviiffs dgapnsfgay lnwktasdck tagtiatddd gsgtpaglyy ldrvsdtlgg
      301 kctpsetydy algryqtlpd kvsslpdwyn ahnpstnpnd ptlreyavvt ssprvvtnti
      361 tyanvnrasr nlveamarks qdegiyvftl glgaslkagt gydnekgedv lkcmanstda
      421 parcfnaakp vglycyaatt sdltpcfskl asaimrisk
//
LOCUS       WP_235922829             572 aa            linear   BCT 02-MAR-2025
DEFINITION  Eco57I restriction-modification methylase domain-containing protein
            [Rugamonas aquatica].
ACCESSION   WP_235922829
VERSION     WP_235922829.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas aquatica
  ORGANISM  Rugamonas aquatica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
REFERENCE   1  (residues 1 to 572)
  AUTHORS   Schluckebier,G., Kozak,M., Bleimling,N., Weinhold,E. and Saenger,W.
  TITLE     Differential binding of S-adenosylmethionine S-adenosylhomocysteine
            and Sinefungin to the adenine-specific DNA methyltransferase M.TaqI
  JOURNAL   J Mol Biol 265 (1), 56-67 (1997)
   PUBMED   8995524
REFERENCE   2  (residues 1 to 572)
  AUTHORS   Janulaitis,A., Vaisvila,R., Timinskas,A., Klimasauskas,S. and
            Butkus,V.
  TITLE     Cloning and sequence analysis of the genes coding for Eco57I type
            IV restriction-modification enzymes
  JOURNAL   Nucleic Acids Res 20 (22), 6051-6056 (1992)
   PUBMED   1334261
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019291.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07669.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Rugamonas aquatica"
                     /db_xref="taxon:2743357"
     Protein         1..572
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=63364
     Region          37..272
                     /region_name="HsdM"
                     /note="Type I restriction-modification system, DNA
                     methylase subunit [Defense mechanisms]; COG0286"
                     /db_xref="CDD:440055"
ORIGIN      
        1 mtlvptigdr iapaiaacpm faakeelakl gghevrgavf trievvefil dlvgytedkp
       61 lhqlrileps fgggnfliaa irrlinswrs sgdaqdvgsl gnairavelh retfnstyaa
      121 vtallqqegl hsaaaealan rwliqgdfll tplhddfnfv vgnppyvrqe liptallaey
      181 rarfqtmydr adlyipfiek sltllskggv lgficadrwt knrygaplrk lvsdhfhlrt
      241 fvdmsdtpaf hsdviaypai tvisrekagp trvahrpkid saslcalaae ihskslpsdt
      301 ttvrelarvt dgmepwllgs sdqtalvrrl eglfppleea gckvgigvat gadnafigdf
      361 dsldveddrk vplvttrdim sgevkwrgeg vinpfadagg lvdlavyprl rryleerrgv
      421 iekrhvatkn panwyrtidr itpsltakpk llipdikgka hivfeagely phhnlyyats
      481 dtwdlralqa vllsevtrlf iatystkmrg gflrfqaqyl rririptwds vpvalrqala
      541 aaattrdlda cnravfelyg lsqeerntlg sn
//
LOCUS       WP_235922847             508 aa            linear   BCT 02-MAR-2025
DEFINITION  glycine betaine ABC transporter substrate-binding protein
            [Rugamonas aquatica].
ACCESSION   WP_235922847
VERSION     WP_235922847.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas aquatica
  ORGANISM  Rugamonas aquatica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
REFERENCE   1  (residues 1 to 508)
  AUTHORS   Fraser,K.R., Harvie,D., Coote,P.J. and O'Byrne,C.P.
  TITLE     Identification and characterization of an ATP binding cassette
            L-carnitine transporter in Listeria monocytogenes
  JOURNAL   Appl Environ Microbiol 66 (11), 4696-4704 (2000)
   PUBMED   11055912
REFERENCE   2  (residues 1 to 508)
  AUTHORS   Kappes,R.M., Kempf,B., Kneip,S., Boch,J., Gade,J., Meier-Wagner,J.
            and Bremer,E.
  TITLE     Two evolutionarily closely related ABC transporters mediate the
            uptake of choline for synthesis of the osmoprotectant glycine
            betaine in Bacillus subtilis
  JOURNAL   Mol Microbiol 32 (1), 203-216 (1999)
   PUBMED   10216873
REFERENCE   3  (residues 1 to 508)
  AUTHORS   Kempf,B. and Bremer,E.
  TITLE     OpuA, an osmotically regulated binding protein-dependent transport
            system for the osmoprotectant glycine betaine in Bacillus subtilis
  JOURNAL   J Biol Chem 270 (28), 16701-16713 (1995)
   PUBMED   7622480
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015995.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04069.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Rugamonas aquatica"
                     /db_xref="taxon:2743357"
     Protein         1..508
                     /product="glycine betaine ABC transporter
                     substrate-binding protein"
                     /GO_component="GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=53888
     Region          21..271
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Region          307..472
                     /region_name="OpuBB"
                     /note="ABC-type proline/glycine betaine transport system,
                     permease component [Amino acid transport and metabolism];
                     COG1174"
                     /db_xref="CDD:440787"
ORIGIN      
        1 mlviflalwf ggaacaasgd tlhvgskrft esyilgevla qtssphakve hlqglgntai
       61 vlaalqagri dvypeylgti dleilkhqqa apleqirrel apmglgvavp lgfnntyala
      121 vrgdadglkk lselvtqprl rfglshefig radgwpglak ryglpqrpeg ldhgiayeal
      181 mqrqvdvidi ystdakirqy glrvleddra yfprydavll yrldaaerfp aawkaitqle
      241 grisaadmia mnaaaeidgq nfanvardwl aahkplasga altaagaapa aapvrdglma
      301 klfdknlwpq trqhltlvlv avllacvigi pmgvlaaalp rlrqvvlgla gvlqtvpsla
      361 llallipllg migtvpalva llvyallpiv rntctgllqv peglrlaaqa lglrpwqrlv
      421 hvelplalpv ilagvktaav msvgtatiaa figaggyger itiglalndn dmllagaipa
      481 allalltqaa fellerlavr graasqrv
//
LOCUS       WP_235922911             453 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rugamonas aquatica].
ACCESSION   WP_235922911
VERSION     WP_235922911.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas aquatica
  ORGANISM  Rugamonas aquatica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Rugamonas aquatica"
                     /db_xref="taxon:2743357"
     Protein         1..453
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=49490
     Region          37..446
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(44..45,48..49,52,83,138..139,141..143,146,162,
                     165..166,169,269,272..273,276..278,281,315,319,377..378,
                     382,386,403,406..407,410..411,414)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:341039"
ORIGIN      
        1 mqtapsavpq epqapaanqp psllramfar gtpmlwvpsg yfamaltymm ltsvtsimfk
       61 nlgmdngqaa qyasylilay tikplfapfv emyrtkkffv lcaqliigvg fagvalamsl
      121 pdymvvmvfl fgvlslvgat qdiasdgvyv tsldartqsl fcgiqslswn igpivasggm
      181 vylsgwlhth yfhhqagvfg pewieswrii ffivaaitiv aalwhmrvmp dgakaenapa
      241 svaeaafilk dsfvtffqkr dvwmmvsfaf lfrlsiglle kigpffmvdp vaqgglglsn
      301 emlgliygty gliavllgsl lggifvarrg lpatlfvlcc avnipnvtfl lmsiyqpdnl
      361 lvisagvaie kfffgfgsvg fmiylmqqla pgkyttthya fgtglmglcm mvtgivsghl
      421 qqalgyvhyf wlvmtatips fivtwyapfh hkd
//
LOCUS       WP_235922946             146 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2844 domain-containing protein [Rugamonas aquatica].
ACCESSION   WP_235922946
VERSION     WP_235922946.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas aquatica
  ORGANISM  Rugamonas aquatica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022458.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11005.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Rugamonas aquatica"
                     /db_xref="taxon:2743357"
     Protein         1..146
                     /product="DUF2844 domain-containing protein"
                     /calculated_mol_wt=14828
     Region          12..145
                     /region_name="DUF2844"
                     /note="Protein of unknown function (DUF2844); pfam11005"
                     /db_xref="CDD:431598"
ORIGIN      
        1 mlvlsllqga layaalgssp snfgttpvrq garslaaaag dsaavytvsq stldsgtvvr
       61 eymnadgvvf avswngpalp dlrtllgdkf avltataakr pkaghsqlav eqqdvvivsg
      121 ghmrayagha wmpgalpagf dtsvie
//
LOCUS       WP_235923160             477 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Corynebacterium lizhenjunii].
ACCESSION   WP_235923160
VERSION     WP_235923160.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium lizhenjunii
  ORGANISM  Corynebacterium lizhenjunii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Corynebacterium lizhenjunii"
                     /db_xref="taxon:2709394"
     Protein         1..477
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=49943
     Region          5..423
                     /region_name="PRK14995"
                     /note="SmvA family efflux MFS transporter"
                     /db_xref="CDD:184957"
ORIGIN      
        1 mrthrwtffa visigllmig ldnsilytal ptlateldas dteqlwiina yalvlaglll
       61 gtgtlgdkvg hrrmflvgla ifglsslaaa fapsawllva araflglgaa vmmpatlali
      121 rhtfpdever ntaigiwgsv avtgaaagpt vggfllehfw wgsiflinvp ivavaflltl
      181 wlappnqpnp dkhwdlpsal yalvtltalv mvikstasah ygtaaitlgv tvvgavvfal
      241 rqrklddpll afeifrsrif sggvlaagga mfglaslems ttqklqlvdq ftpleaglvi
      301 samaiaalpt svlggavlhk vgflplisgg fllmtvsaat vwwaggrdsf tvfvvamilg
      361 glgaglvmsv sstaiiggap lhrtgmaagv eevsyefgtl laiaitgslv pffmarhtdl
      421 stdalhqpdl hslaapayns gylttiglma lvlltitvit vwcfrdnpks gshavvh
//
LOCUS       WP_235923237             805 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Candidatus Chlorobium masyuteum].
ACCESSION   WP_235923237
VERSION     WP_235923237.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Chlorobium masyuteum
  ORGANISM  Candidatus Chlorobium masyuteum
            Bacteria; Pseudomonadati; Chlorobiota; Chlorobiia; Chlorobiales;
            Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.
REFERENCE   1  (residues 1 to 805)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..805
                     /organism="Candidatus Chlorobium masyuteum"
                     /db_xref="taxon:2716876"
     Protein         1..805
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=91127
     Region          <180..417
                     /region_name="COG4191"
                     /note="Signal transduction histidine kinase regulating
                     C4-dicarboxylate transport system [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443345"
     Region          437..556
                     /region_name="REC_hyHK_CKI1_RcsC-like"
                     /note="phosphoacceptor receiver (REC) domain of hybrid
                     sensor histidine kinases/response regulators similar to
                     Arabidopsis thaliana CKI1 and Escherichia coli RcsC;
                     cd17546"
                     /db_xref="CDD:381099"
     Site            order(443,445..446,448..449,452..453,456,524,546,548..549)
                     /site_type="other"
                     /note="Hpt domain binding site [polypeptide binding]"
                     /db_xref="CDD:381099"
     Region          576..702
                     /region_name="CheY"
                     /note="CheY-like REC (receiver) domain, includes
                     chemotaxis protein CheY and sporulation regulator Spo0F
                     [Signal transduction mechanisms]; COG0784"
                     /db_xref="CDD:440547"
     Region          756..>802
                     /region_name="Hpt"
                     /note="Hpt domain; pfam01627"
                     /db_xref="CDD:426352"
     Site            788
                     /site_type="active"
                     /db_xref="CDD:238041"
ORIGIN      
        1 mqilknkare iiehaepnlg vvglfgflgy pvyyliwtyi fpqpyenlpl rifcafisip
       61 wvlyrfipkk lkdifpvyff islfivipff fsfmmlknef svvwamstma glflltllis
      121 drilvsimtg agfmaayvtv ltldgrvsft yfipeyipif ifsiagsiia shkqqqayks
      181 kialmkslsg siahemrnpl naitnaiasv qntlpvkpgv daaaksyyrl shsglinihn
      241 iiedsshtls sankiidsil tslqggevvv defiriksen aietalsrfp yndvkekkvi
      301 sfekcmnfdf lgdrdlfffv ifnllknaly ykdrnnfhis ittdvtalsn iirvkdngpg
      361 ikaknieqif esfytsnkkg gnglglsfcr rvvdsfggti vcnskegewt eftitlpkyy
      421 sktvreikrn ilrkkrilvt dddssnrlii skylselhcq idqaenglqa vamvsekryd
      481 lifmdfempf lngdravkli rsaqnidpsl alhyrdvpiv gitslpmpea teraerngmn
      541 evlakpvsva ttkkiiekyf fsdaspdrye seitvsnkri llvddnetsr rimralleny
      601 gyhieqafng realslleke dfdlilmdvd mpvmdgieat kairsgknff rfragktipi
      661 iaitgnndeq ssrnlkeagv dfhlckpvfk dkliatinvl lknniqeekp misnthfese
      721 qkgsdfwtti qsekildsai idelreiggd elivtlfetf iddaekftag ldeavgnqdl
      781 kqfdhlihtl kgtsgsigah kmylp
//
LOCUS       WP_235923288             263 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein
            [Candidatus Chlorobium masyuteum].
ACCESSION   WP_235923288
VERSION     WP_235923288.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Chlorobium masyuteum
  ORGANISM  Candidatus Chlorobium masyuteum
            Bacteria; Pseudomonadati; Chlorobiota; Chlorobiia; Chlorobiales;
            Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.
REFERENCE   1  (residues 1 to 263)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Candidatus Chlorobium masyuteum"
                     /db_xref="taxon:2716876"
     Protein         1..263
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /calculated_mol_wt=28955
     Region          12..263
                     /region_name="YbxI"
                     /note="Beta-lactamase class D [Defense mechanisms];
                     COG2602"
                     /db_xref="CDD:442014"
ORIGIN      
        1 mmklllllll lfpalpacse aqeidrklfg eydtalvivn rsdgtvtdvn palsarrisp
       61 cstfkiyntl iglqlgllrg addpwytwdg vhrdidgwnr nltlreafrv savpsfqala
      121 saighermkr yidrigygnr eissgidsfw lprpgragll isaseqvall nrlldgrlpf
      181 skkhlntlrd imlvaespkg klygktgsgr saegreelgw fvgflesggv eyafacnitg
      241 gehpsgkaar timervfsaq nll
//
LOCUS       WP_235923331             110 aa            linear   BCT 02-MAR-2025
DEFINITION  MgtC/SapB family protein [Brucella tritici].
ACCESSION   WP_235923331
VERSION     WP_235923331.1
KEYWORDS    RefSeq.
SOURCE      Brucella tritici (Ochrobactrum tritici)
  ORGANISM  Brucella tritici
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 110)
  AUTHORS   Moncrief,M.B. and Maguire,M.E.
  TITLE     Magnesium transport in prokaryotes
  JOURNAL   J Biol Inorg Chem 4 (5), 523-527 (1999)
   PUBMED   10550680
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014373.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02308.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Brucella tritici"
                     /db_xref="taxon:94626"
     Protein         1..110
                     /product="MgtC/SapB family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=11530
     Region          <54..>94
                     /region_name="SapB"
                     /note="Magnesium uptake protein YhiD/SapB, involved in
                     acid resistance [Inorganic ion transport and metabolism];
                     COG1285"
                     /db_xref="CDD:440896"
ORIGIN      
        1 mtirviaifd nrscwnaarl gnctryltag hrsstchngd iavraikske cstkgtataa
       61 slwstgaigi acavnafdva iiimvfallt liffsngksd tedtgargtq
//
LOCUS       WP_235923352              45 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase N-terminal domain-containing protein
            [Candidatus Chlorobium masyuteum].
ACCESSION   WP_235923352
VERSION     WP_235923352.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Chlorobium masyuteum
  ORGANISM  Candidatus Chlorobium masyuteum
            Bacteria; Pseudomonadati; Chlorobiota; Chlorobiia; Chlorobiales;
            Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025039.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13655.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..45
                     /organism="Candidatus Chlorobium masyuteum"
                     /db_xref="taxon:2716876"
     Protein         1..45
                     /product="reverse transcriptase N-terminal
                     domain-containing protein"
                     /calculated_mol_wt=4871
     Region          15..>45
                     /region_name="RVT_N"
                     /note="N-terminal domain of reverse transcriptase;
                     pfam13655"
                     /db_xref="CDD:433382"
ORIGIN      
        1 mnagtvacap sglgwqtinw vnarhqvrkl qarivkatqe gkrvr
//
LOCUS       WP_235923403             599 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Brucella tritici].
ACCESSION   WP_235923403
VERSION     WP_235923403.1
KEYWORDS    RefSeq.
SOURCE      Brucella tritici (Ochrobactrum tritici)
  ORGANISM  Brucella tritici
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 599)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Brucella tritici"
                     /db_xref="taxon:94626"
     Protein         1..599
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=64803
     Region          <68..583
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 misngaslne tvreicsgve ellpgcvcsv wtvnpagmlh plpsptlphe ylnscagvms
       61 apdigscgea aytrepvltl diatdprwak rrdaalslql kasysvpima erdrvigtvg
      121 lyfrerrgpf vseldviqrc vdlcgialrr hervlererr afidiltglp nraafnaald
      181 hvpletagaw alflidldnl kvvndtfghs agdeliraag aniarssapd rtfrlggdef
      241 cvliqspnsl cdleatasgi laglasgvpc dghlivpkat iggavfgtdl itaadvteaa
      301 dqalyhaket skggfarftp qigakitsrr daklklgnav ksnnievyye pifsvntrav
      361 vgleavfrta grgrlitddg freamkdari aadvikrlan iiatdmlfwq ernlsvdfvs
      421 lnvsaaefya sdisrpltsi fneagiatnq vmmeiseeit igernrvvrq kiatlrtagf
      481 rvaldqfgmd hgsinnlmgl svdvlkikhd fidrvlpddp semlansiat isralkfgii
      541 vtevgteaql srlsmmgcrl aqghvlapaa grdaiakllr esahqypeid rpnsspypf
//
LOCUS       WP_235922937             323 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-L-arabinofuranosidase domain-containing protein [Rugamonas
            aquatica].
ACCESSION   WP_235922937
VERSION     WP_235922937.1
KEYWORDS    RefSeq.
SOURCE      Rugamonas aquatica
  ORGANISM  Rugamonas aquatica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Rugamonas.
REFERENCE   1  (residues 1 to 323)
  AUTHORS   Ito,T., Saikawa,K., Kim,S., Fujita,K., Ishiwata,A., Kaeothip,S.,
            Arakawa,T., Wakagi,T., Beckham,G.T., Ito,Y. and Fushinobu,S.
  TITLE     Crystal structure of glycoside hydrolase family 127
            beta-l-arabinofuranosidase from Bifidobacterium longum
  JOURNAL   Biochem Biophys Res Commun 447 (1), 32-37 (2014)
   PUBMED   24680821
REFERENCE   2  (residues 1 to 323)
  AUTHORS   Fujita,K., Takashi,Y., Obuchi,E., Kitahara,K. and Suganuma,T.
  TITLE     Characterization of a novel beta-L-arabinofuranosidase in
            Bifidobacterium longum: functional elucidation of a DUF1680 protein
            family member
  JOURNAL   J Biol Chem 289 (8), 5240-5249 (2014)
   PUBMED   24385433
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019556.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07944.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Rugamonas aquatica"
                     /db_xref="taxon:2743357"
     Protein         1..323
                     /product="beta-L-arabinofuranosidase domain-containing
                     protein"
                     /calculated_mol_wt=37304
     Region          <5..229
                     /region_name="LanC_like"
                     /note="Cyclases involved in the biosynthesis of
                     lantibiotics, and similar proteins; cl04955"
                     /db_xref="CDD:471159"
ORIGIN      
        1 mrrtwlalar rlyhtkvllp ltqgrdelan lhantqipkl iglarlhelt grrgdadavd
       61 ffwkrvtqhh syviggngdr eyfsapdsia ahiteqtcea casynmlkmt rhlyswapda
      121 ayfdhyerth lnhilahqnp rtgmftymtp lmsgvareys sedndfwccv lsgmeshakh
      181 gdsiywengd tlfvnlyips tlewkaaaar lelntrypye gdielkvrrl atavyfhvyt
      241 dsasdctrrp dtvaharrss lrsselmlfw ililsilycl rrrhessrdc aglsglhrrr
      301 ygryqrgsgr rcvahrfgll gwr
//
LOCUS       WP_235923443             716 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxy terminal-processing peptidase [Psychroflexus aurantiacus].
ACCESSION   WP_235923443
VERSION     WP_235923443.1
KEYWORDS    RefSeq.
SOURCE      Psychroflexus aurantiacus
  ORGANISM  Psychroflexus aurantiacus
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Psychroflexus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023246.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11818.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Psychroflexus aurantiacus"
                     /db_xref="taxon:2709310"
     Protein         1..716
                     /product="carboxy terminal-processing peptidase"
                     /EC_number="3.4.21.102"
                     /calculated_mol_wt=82361
     Region          52..636
                     /region_name="PRK11186"
                     /note="carboxy terminal-processing peptidase"
                     /db_xref="CDD:236873"
ORIGIN      
        1 mkqhnlknnl vilflitlfa vtscsftttk dfdddsdkdq vlielityvi eqghydmkev
       61 ddefsqsvfk dyikgvdpik rhflesdfqe fqafetlldd qiknknllff nltverykkr
      121 meeakgfyae lleepfdfqk setintdyeq idyakdkkel kqrwreqfkf stlstyydlq
      181 eeqaqriedg eemevksdae leaeareitr estenyfdtm sdlerrdwfn lyinsfvsqf
      241 dphtnyfapq dkdrfdisms gklegigarl qkqrdnvkiv eiisggpawt ngelevgdli
      301 qkvkqedeke pvdirgmrld davdlikgpk gtevtltvkk vdgstqliri trdvveieet
      361 yaktstverd gdvfglinlp kfyfdmqnyt ernaasdikk elerlneiga kglvidlrnn
      421 gggslstvvd iagffieegp vvqvrdaqdn tevledtdsd viwdkplvil vnelsasase
      481 ilaaamqdye ravvigskqt ygkgtvqnvv dlnrwmrnss fgdmgalkit tqkfyringg
      541 stqlkgvasd vavpdrfsyi digerdyenp mpwdkidaad ykvwggysnl eeiisaskar
      601 lsksaqiqmi denaqwiesq rkqnlfslay eeykeemiqv eemtskfegi sqyntslvfk
      661 slpyeealmt qdssltekrq rwheslskdv yveeaihvlq dlnvdknsik laarkd
//
LOCUS       WP_235923477             411 aa            linear   BCT 02-MAR-2025
DEFINITION  3-deoxy-D-manno-octulosonic acid transferase [Psychroflexus
            aurantiacus].
ACCESSION   WP_235923477
VERSION     WP_235923477.1
KEYWORDS    RefSeq.
SOURCE      Psychroflexus aurantiacus
  ORGANISM  Psychroflexus aurantiacus
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Psychroflexus.
REFERENCE   1  (residues 1 to 411)
  AUTHORS   Chung,H.S. and Raetz,C.R.
  TITLE     Interchangeable domains in the Kdo transferases of Escherichia coli
            and Haemophilus influenzae
  JOURNAL   Biochemistry 49 (19), 4126-4137 (2010)
   PUBMED   20394418
REFERENCE   2  (residues 1 to 411)
  AUTHORS   Lobau,S., Mamat,U., Brabetz,W. and Brade,H.
  TITLE     Molecular cloning, sequence analysis, and functional
            characterization of the lipopolysaccharide biosynthetic gene kdtA
            encoding 3-deoxy-alpha-D-manno-octulosonic acid transferase of
            Chlamydia pneumoniae strain TW-183
  JOURNAL   Mol Microbiol 18 (3), 391-399 (1995)
   PUBMED   8748024
REFERENCE   3  (residues 1 to 411)
  AUTHORS   Belunis,C.J. and Raetz,C.R.
  TITLE     Biosynthesis of endotoxins. Purification and catalytic properties
            of 3-deoxy-D-manno-octulosonic acid transferase from Escherichia
            coli
  JOURNAL   J Biol Chem 267 (14), 9988-9997 (1992)
   PUBMED   1577828
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11445568
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Psychroflexus aurantiacus"
                     /db_xref="taxon:2709310"
     Protein         1..411
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /EC_number="2.4.99.-"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=46621
     Region          1..409
                     /region_name="KdtA"
                     /note="3-deoxy-D-manno-octulosonic-acid transferase [Cell
                     wall/membrane/envelope biogenesis]; COG1519"
                     /db_xref="CDD:441128"
ORIGIN      
        1 mkslyqfiis sfqflqpvlk flspkmrlfv egrtnwktkl qaqvsvhdkv iwfhaaslge
       61 yeqavpvida lkqthpdyki avsffspsgy evkkkdskld iatylpldtq knarefldil
      121 kpevaffiky eiwpnlmevl snrriksyli sglfrpeqly frpmgkfmte alsrfdhlfv
      181 qneeslnllk khgfdqasis gdtrydrvta qlgmdnqlsf meyftasgel tvvfgstwpe
      241 dlsialdain kapegirivi aphqinatqi qklkknirkn licysemqsq dlqdyevliv
      301 dtiglltkiy syaniayvgg gmgssglhni lepaafgvpi ligkhyekfp eakmlrrlgg
      361 vfsvasknef devfnklitd qtlreksgqi cghfvnseag atqkimstis f
//
LOCUS       WP_235923495             266 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3822 family protein [Psychroflexus aurantiacus].
ACCESSION   WP_235923495
VERSION     WP_235923495.1
KEYWORDS    RefSeq.
SOURCE      Psychroflexus aurantiacus
  ORGANISM  Psychroflexus aurantiacus
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Psychroflexus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024271.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12864.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Psychroflexus aurantiacus"
                     /db_xref="taxon:2709310"
     Protein         1..266
                     /product="DUF3822 family protein"
                     /calculated_mol_wt=30560
     Region          12..242
                     /region_name="DUF3822"
                     /note="Protein of unknown function (DUF3822); pfam12864"
                     /db_xref="CDD:432839"
ORIGIN      
        1 mmsesstypi nrlsifilqd gfsflvtdsl ttplffknfk lgnsqstsel lkvlkteitp
       61 afieiqniat leviygnpqf sivpqayfee shlphylkys skliegddfs ydeilpiqan
      121 tvyipyvnin nylfeifgsf kfthlfsgli ekafeksfss keyirihvsg hllyvaafrn
      181 qklllsnafa fetsedfayy ilftikelnl nreeviteft gdfldteens alailstylr
      241 hlsfsnaytp pafenlegfq ehfnll
//
LOCUS       WP_235923525             385 aa            linear   BCT 02-MAR-2025
DEFINITION  alanine racemase [Brucella tritici].
ACCESSION   WP_235923525
VERSION     WP_235923525.1
KEYWORDS    RefSeq.
SOURCE      Brucella tritici (Ochrobactrum tritici)
  ORGANISM  Brucella tritici
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 385)
  AUTHORS   Shaw,J.P., Petsko,G.A. and Ringe,D.
  TITLE     Determination of the structure of alanine racemase from Bacillus
            stearothermophilus at 1.9-A resolution
  JOURNAL   Biochemistry 36 (6), 1329-1342 (1997)
   PUBMED   9063881
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013345.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01168.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Brucella tritici"
                     /db_xref="taxon:94626"
     Protein         1..385
                     /product="alanine racemase"
                     /EC_number="5.1.1.1"
                     /calculated_mol_wt=40691
     Region          15..380
                     /region_name="Dsd1"
                     /note="D-serine deaminase, pyridoxal phosphate-dependent
                     [Amino acid transport and metabolism]; COG3616"
                     /db_xref="CDD:442834"
ORIGIN      
        1 mtepavaint fnrpspadiq tpyveidedr llrnlkemqq kadragvslr phikthkslt
       61 iakhqlqlga igvtaskpde alvfveggip svtlaypvvr pdsvshlirg aqirdtelsf
      121 iaaheigiqa igaaakahdv klgvflkvdv glgrvgvkpq dpaaivlaqk iaqhpylafa
      181 glfshaghay gnksaeeltn ianaeaqtll qlaeqlkeag vevpaisvgs tptclgapip
      241 sgiteirpgn yafldrtalr lgiasgdnia lsiiatvvah ndhhfivdag skslssdlga
      301 hgsgsggfgl avnvgddtsk mweierlsee qgfvrfgdtp ppvgsrvrif pnhscaviaq
      361 fdqvalrqsd grtrtlsiea rghqt
//
LOCUS       WP_235923543             970 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 N-terminal domain-containing protein
            [Psychroflexus aurantiacus].
ACCESSION   WP_235923543
VERSION     WP_235923543.1
KEYWORDS    RefSeq.
SOURCE      Psychroflexus aurantiacus
  ORGANISM  Psychroflexus aurantiacus
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Psychroflexus.
REFERENCE   1  (residues 1 to 970)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00933.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..970
                     /organism="Psychroflexus aurantiacus"
                     /db_xref="taxon:2709310"
     Protein         1..970
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=109557
     Region          46..480
                     /region_name="BglX"
                     /note="Periplasmic beta-glucosidase and related
                     glycosidases [Carbohydrate transport and metabolism];
                     COG1472"
                     /db_xref="CDD:441081"
     Region          582..960
                     /region_name="AmpC"
                     /note="CubicO group peptidase, beta-lactamase class C
                     family [Defense mechanisms]; COG1680"
                     /db_xref="CDD:441286"
ORIGIN      
        1 msskiytkvv flmtffsltc isaqsslfse dinaqrkwvd svysnlslee kigqlfmidv
       61 ftnksdaele nianfintnh iggiifskgn pyrqaqftnr iqtenqvpll igmdaewgla
      121 mrldstyafp wnmtlgaikd tsivrkvgyq igkhnkrlgv hinfapvadi ntnpdnpiig
      181 nrsfgetkev vishavalmk gmheagilts akhfpghgdt qqdshltlpt idfseqrira
      241 ielepfrali regvssimva hlnvpslesr pnfpsslspk ivsqllkeel gfhglvitda
      301 lnmkgvsdnn tpgevdlkaf qagsdillis envpkaieni kraikndkis ekrlaysvkk
      361 ilyakykvgl nnfepietaq ltselnsgln daiyksaien attllkndlg ilpindvehq
      421 kigylglgda sgetfyetln ryaaverian kesilnknsk ldfdhiiigy hksdihpwtd
      481 ykftpyeikw ieqlsrenkv tlvnfsrpys llglqsfini daifqvyqns niaqsvaaqq
      541 ifgaletigk lpvtitsafp vgtgyklksn grlgygyyqn lgfdkrlekk vdsianyald
      601 ekmtpgmqil iarkgkiiyd knfgyhtydk knkvqsddvy dlasltkilt tlpilmtlee
      661 askldlktkl hellpalass nkanisvlem lshyarlepw ipfyqktlee rseyyaseys
      721 eefsikvled mylrtdyqds iysqivesel rdtleykysd lpyyflkkyi eeqtdntldt
      781 laetyfyrpm glshlkffpl nhfdkekivp tendtiwrke lihgtvhdqg aamlggvggh
      841 aglfgnardv asfmqlylnn gdfggknyfs pqtmtkfntc yycdkevrrg vgfdkpqled
      901 vgptcgclsm ssfghsgftg tyawadpeee iiyiflsnri hpdptnskli eedirtkiqg
      961 viyenlskdy
//
LOCUS       WP_235923559             453 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5723 family protein [Psychroflexus aurantiacus].
ACCESSION   WP_235923559
VERSION     WP_235923559.1
KEYWORDS    RefSeq.
SOURCE      Psychroflexus aurantiacus
  ORGANISM  Psychroflexus aurantiacus
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Psychroflexus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040164.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18990.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Psychroflexus aurantiacus"
                     /db_xref="taxon:2709310"
     Protein         1..453
                     /product="DUF5723 family protein"
                     /calculated_mol_wt=50969
     Region          47..426
                     /region_name="DUF5723"
                     /note="Family of unknown function (DUF5723); pfam18990"
                     /db_xref="CDD:465943"
ORIGIN      
        1 mrscafllll lscnalwsqd khllynqrhn pqalmlnpgm ayqktdfhig ipllsniyvs
       61 lgntdfsmda ifnandinan ieevldrmss edflafnqkl dllhigwrrg kryysagayq
      121 eidavsnfpk dlielayygn agqnrsydlg hintkvntqt vfhfginqqm nenlhlgarv
      181 klytsslnar slrntgrfrs rtdetglllt qtisnlnlkf dstgienade ltpgnllfgs
      241 nlglgfdfgl syiiddklef taslldlgfi qfskdtqrlt vqgyyeyegl eiqfpdfaqg
      301 gdlvtyyqdl gddieealps ettsdaytfv qpakmnlgls yrfgsvsgsy dctltparer
      361 fgnqtlslhv fsmanagnlf ysinamyerr fwnafyvkas lgvdqfnrpn yggglaldag
      421 kvnlflnldr lnnvtnlyea kalafqfgmn lkf
//
LOCUS       WP_235923584             458 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome P450 [Brucella tritici].
ACCESSION   WP_235923584
VERSION     WP_235923584.1
KEYWORDS    RefSeq.
SOURCE      Brucella tritici (Ochrobactrum tritici)
  ORGANISM  Brucella tritici
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 458)
  AUTHORS   Werck-Reichhart,D. and Feyereisen,R.
  TITLE     Cytochromes P450: a success story
  JOURNAL   Genome Biol 1 (6), REVIEWS3003 (2000)
   PUBMED   11178272
REFERENCE   2  (residues 1 to 458)
  AUTHORS   Graham-Lorence,S., Amarneh,B., White,R.E., Peterson,J.A. and
            Simpson,E.R.
  TITLE     A three-dimensional model of aromatase cytochrome P450
  JOURNAL   Protein Sci 4 (6), 1065-1080 (1995)
   PUBMED   7549871
REFERENCE   3  (residues 1 to 458)
  AUTHORS   Degtyarenko,K.N. and Archakov,A.I.
  TITLE     Molecular evolution of P450 superfamily and P450-containing
            monooxygenase systems
  JOURNAL   FEBS Lett 332 (1-2), 1-8 (1993)
   PUBMED   8405421
REFERENCE   4  (residues 1 to 458)
  AUTHORS   Nelson,D.R., Kamataki,T., Waxman,D.J., Guengerich,F.P.,
            Estabrook,R.W., Feyereisen,R., Gonzalez,F.J., Coon,M.J.,
            Gunsalus,I.C., Gotoh,O. et al.
  TITLE     The P450 superfamily: update on new sequences, gene mapping,
            accession numbers, early trivial names of enzymes, and nomenclature
  JOURNAL   DNA Cell Biol 12 (1), 1-51 (1993)
   PUBMED   7678494
REFERENCE   5  (residues 1 to 458)
  AUTHORS   Guengerich,F.P.
  TITLE     Reactions and significance of cytochrome P-450 enzymes
  JOURNAL   J Biol Chem 266 (16), 10019-10022 (1991)
   PUBMED   2037557
REFERENCE   6  (residues 1 to 458)
  AUTHORS   Nebert,D.W. and Gonzalez,F.J.
  TITLE     P450 genes: structure, evolution, and regulation
  JOURNAL   Annu Rev Biochem 56, 945-993 (1987)
   PUBMED   3304150
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00067.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Brucella tritici"
                     /db_xref="taxon:94626"
     Protein         1..458
                     /product="cytochrome P450"
                     /GO_function="GO:0004497 - monooxygenase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=52007
     Region          58..453
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(102,106,113,157,263..264,267..268,271..272,275,328,
                     337,339,362,398..400,404..408,411..412)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410713"
     Site            order(184,263,266..267,271,335..338)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410713"
ORIGIN      
        1 mserpgpfvp paprprekpv grfemmrvvy knplelwgep synerwisvs wfgmktiian
       61 dpglirhvlv dnaanypmsa irqrvlrpll rdglltaegq vwkrsrkama pvftprhigg
      121 faetmrdrsl qfveryktpg titdvahdmt lltydilaet lfsgeiagdp ndfahqidkl
      181 fetmgrvdpf dllglpdwlp rltrlrgqqs lgffralvsd tiamrkarmd kgeavpsdfl
      241 tlllraegpe glsrseiedn iitfigaghe ttaralgwtl yllakapqer drieleidsf
      301 fakggrdlpp qewlaslpft raafeeamrl yppapsinre aatddkyddl tipkgatvlv
      361 mpwvihrhrl ywdqpdafmp erfwpenrdk ldrfqylpfg agprvcigas falqeavial
      421 ailldgrrfe vlettkpwpv qklttqpqgg lpmkvlkr
//
LOCUS       WP_235924100             129 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6524 family protein [Pseudoroseicyclus tamaricis].
ACCESSION   WP_235924100
VERSION     WP_235924100.1
KEYWORDS    RefSeq.
SOURCE      Pseudoroseicyclus tamaricis
  ORGANISM  Pseudoroseicyclus tamaricis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Pseudoroseicyclus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039479.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20134.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Pseudoroseicyclus tamaricis"
                     /db_xref="taxon:2705421"
     Protein         1..129
                     /product="DUF6524 family protein"
                     /calculated_mol_wt=13780
     Region          5..119
                     /region_name="DUF6524"
                     /note="Family of unknown function (DUF6524); pfam20134"
                     /db_xref="CDD:437966"
ORIGIN      
        1 malqffmrws fagllvamty nptpwnylsw farhrldqlp laavmglala igyvvtlrat
       61 vralgltgvl lvlglvaavt wlaldqgwlt lqtpdgriwl aifaasavlg iglswsmvrg
      121 hapegagas
//
LOCUS       WP_235924236             340 aa            linear   BCT 02-MAR-2025
DEFINITION  endonuclease/exonuclease/phosphatase family protein
            [Pseudoroseicyclus tamaricis].
ACCESSION   WP_235924236
VERSION     WP_235924236.1
KEYWORDS    RefSeq.
SOURCE      Pseudoroseicyclus tamaricis
  ORGANISM  Pseudoroseicyclus tamaricis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Pseudoroseicyclus.
REFERENCE   1  (residues 1 to 340)
  AUTHORS   Dlakic,M.
  TITLE     Functionally unrelated signalling proteins contain a fold similar
            to Mg2+-dependent endonucleases
  JOURNAL   Trends Biochem Sci 25 (6), 272-273 (2000)
   PUBMED   10838565
REFERENCE   2  (residues 1 to 340)
  AUTHORS   Mol,C.D., Kuo,C.F., Thayer,M.M., Cunningham,R.P. and Tainer,J.A.
  TITLE     Structure and function of the multifunctional DNA-repair enzyme
            exonuclease III
  JOURNAL   Nature 374 (6520), 381-386 (1995)
   PUBMED   7885481
REFERENCE   3  (residues 1 to 340)
  AUTHORS   Lahm,A. and Suck,D.
  TITLE     DNase I-induced DNA conformation. 2 A structure of a DNase
            I-octamer complex
  JOURNAL   J Mol Biol 222 (3), 645-667 (1991)
   PUBMED   1748997
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015338.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03372.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Pseudoroseicyclus tamaricis"
                     /db_xref="taxon:2705421"
     Protein         1..340
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=35558
ORIGIN      
        1 mlasllagps laetlrfavy gaelsrdgpg lllmdllepd aqaaataqvi aeaapdvlll
       61 tdmdydhgga algalqalla aeghemrhrf aarpnsgmat gldmdgdgrt gaprdaqgyg
      121 tfagqgglal lsryplslrr dftplpwrdl pgatpptlld gapfpseeaa aaqrlsssah
      181 wvvqldapgg pvtlmawaat ppvfdgpedr nglrardell lwrrylggel gpapeapfll
      241 mglsnldpee gdgdttamaa fladhrlqdp lprsetggla taaweeeeng tgplrvtyil
      301 psadwdiada gvlwpansap laaaaeaagp hrlvwvevar
//
LOCUS       WP_235924280             319 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6175 family protein [Flavobacterium lotistagni].
ACCESSION   WP_235924280
VERSION     WP_235924280.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium lotistagni
  ORGANISM  Flavobacterium lotistagni
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040342.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19672.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Flavobacterium lotistagni"
                     /db_xref="taxon:2709660"
     Protein         1..319
                     /product="DUF6175 family protein"
                     /calculated_mol_wt=35055
     Region          27..317
                     /region_name="DUF6175"
                     /note="Family of unknown function (DUF6175); pfam19672"
                     /db_xref="CDD:437504"
ORIGIN      
        1 mmknrfhksi ftllalfaln fvsaqakkpt imvvpsevwc ntngymttyn nqgtptkipd
       61 fkkafqenan llqvvakint lmmdrgfplk dmssaiktle sesaenamms sksgagises
      121 pidrlkkvak adiimeltwt vnttgpkksi tytlrglday tdkqvagatg tgapsfsael
      181 pvlleeavla nidgfnaqlq ahfddmfang reiivrikkf dswpddleke fdgkelgtvi
      241 edwmtantvk gryslsdste smqlyeqvri plydatgkat dargflkglq tflkgapyni
      301 tnkltmkglg qavivlgek
//
LOCUS       WP_235924316             236 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase domain-containing protein [Flavobacterium
            lotistagni].
ACCESSION   WP_235924316
VERSION     WP_235924316.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium lotistagni
  ORGANISM  Flavobacterium lotistagni
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025033.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13649.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Flavobacterium lotistagni"
                     /db_xref="taxon:2709660"
     Protein         1..236
                     /product="methyltransferase domain-containing protein"
                     /calculated_mol_wt=27165
     Region          7..207
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(66..72,94..95,118..120,136)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
ORIGIN      
        1 mistkhrtek peimddfnlq ghlltdaldk iaainkwlgg nqltiksvkk llkdwskekp
       61 vhivdlgcgn gdmlrslany gckndfnfkl tgidanaftt nyakqsslty pnieyvaadi
      121 lefdfkqqpi divlctltlh hfkneqimal lnrlnqtask givvndlhrs kiayylfqll
      181 clifrlnrms kedgltsilr gftkdelvsf sknlkfarys ivwkwafryq wiiyks
//
LOCUS       WP_235924283            1310 aa            linear   BCT 02-MAR-2025
DEFINITION  reprolysin-like metallopeptidase [Flavobacterium lotistagni].
ACCESSION   WP_235924283
VERSION     WP_235924283.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium lotistagni
  ORGANISM  Flavobacterium lotistagni
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024972.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13583.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1310
                     /organism="Flavobacterium lotistagni"
                     /db_xref="taxon:2709660"
     Protein         1..1310
                     /product="reprolysin-like metallopeptidase"
                     /GO_function="GO:0008237 - metallopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=136708
     Region          197..411
                     /region_name="ZnMc"
                     /note="Zinc-dependent metalloprotease. This super-family
                     of metalloproteases contains two major branches, the
                     astacin-like proteases and the adamalysin/reprolysin-like
                     proteases. Both branches have wide phylogenetic
                     distribution, and contain sub-families, which...; cl00064"
                     /db_xref="CDD:469599"
     Region          <414..751
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
     Region          661..1037
                     /region_name="COG3979"
                     /note="Chitodextrinase [Carbohydrate transport and
                     metabolism]"
                     /db_xref="CDD:443178"
     Region          994..>1171
                     /region_name="COG3979"
                     /note="Chitodextrinase [Carbohydrate transport and
                     metabolism]"
                     /db_xref="CDD:443178"
     Region          1150..1224
                     /region_name="GEVED"
                     /note="GEVED domain; pfam20009"
                     /db_xref="CDD:466256"
     Region          1242..1310
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mknrllsiam maitsfsfaq agkavwkata kdpnavtfan kqsilsprlf tldinqlkqt
       61 lnsapkrfas nvqsnvvvaf pnaqgqmesf rvkessnmdp elaarypdik syigqgienp
      121 gssiyfsisp lglqtmvika dqsaefiepy ttdlssyavy rksdkaasld rfecrmidvv
      181 hdeirteaar pnaddatlrt frlamsvtge ytayfggtka lalaainntm trvngvfekd
      241 fgarmvlian tdtviyttas sdpysaaatg angawnqelq ttltnnigna nydvghlfga
      301 sggggnagci gcictnptas vplgkgsgft spadgipsgd nfdidyvahe lghqfganht
      361 fthsnegtgv qmepgsgsti mgyagitsvd vqphsdpyfh aisiqqvtnn ikaktcsvnt
      421 atgnaiptan agldytipks tpfmltgtat dangdilnya weqmdaqsna tapsatktsg
      481 vnfrsynptt sptrylprma svltgattta gseltvealp svartmnfrf tvrdnraggp
      541 annsddmivt vnatagpfsv sspntavsya gnstqtitwa vagttangvn canvdillst
      601 dggntwnmll aatpndgtqa vtipntpgtt nrimvkgtnh iffdvsnsnf titagstdtv
      661 aptaptlaas gttqtttsls wsgatdnvav igydvykdgv llgstastsy avsgltastt
      721 yvftvkakda agnvsaasna vsvttlapiv dttapsaptn laaagttata tnlswtastd
      781 nvgvtgydvy qnsvfratvt ttsyaatglt aataysfyvi akdaagnssv asntvnvttl
      841 taslnycasq gnstadekig kvvfgtinnt stgtagyenf taiatnatrg saytititps
      901 wtsstyaegy avfidynqdg dftdagetvw tktastttpv sgsitipata tlgatrmrvs
      961 mkynavptsc etfsygqved ytvniqagvp dtvapsaptn ltasgttatt tnlswtaatd
     1021 nvgisgydvy qngvfrasat tnsyavtglt aattysfyii akdaagnsst asntanvttl
     1081 tttvsyctsq gnstaderig kvvlgtinnt stgttgyenf tslstnatrg taytititps
     1141 wtstvysegy avfidynkdg dfadagetvw tktaskttpv sgtftipata tlgatrmrvs
     1201 mkyngvptac eafsygqved ytinitstar evennsaltv qvypnpvsgn elhvsgvena
     1261 syrvfsllgq emakgfivee tipvsniaag tyllevtsng qsvvkrfikk
//
LOCUS       WP_235924338            1738 aa            linear   BCT 02-MAR-2025
DEFINITION  GEVED domain-containing protein [Flavobacterium lotistagni].
ACCESSION   WP_235924338
VERSION     WP_235924338.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium lotistagni
  ORGANISM  Flavobacterium lotistagni
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 1738)
  AUTHORS   Back,C.R., Sztukowska,M.N., Till,M., Lamont,R.J., Jenkinson,H.F.,
            Nobbs,A.H. and Race,P.R.
  TITLE     The Streptococcus gordonii Adhesin CshA Protein Binds Host
            Fibronectin via a Catch-Clamp Mechanism
  JOURNAL   J Biol Chem 292 (5), 1538-1549 (2017)
   PUBMED   27920201
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039776.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20009.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1738
                     /organism="Flavobacterium lotistagni"
                     /db_xref="taxon:2709660"
     Protein         1..1738
                     /product="GEVED domain-containing protein"
                     /calculated_mol_wt=183783
     Region          <5..921
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          224..>291
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Region          846..1023
                     /region_name="choice_anch_J"
                     /note="choice-of-anchor J domain; NF038128"
                     /db_xref="CDD:468371"
     Region          1684..1738
                     /region_name="T9SS_Cterm_ChiA"
                     /note="T9SS sorting signal type C; NF033708"
                     /db_xref="CDD:468146"
ORIGIN      
        1 mvggtsvsga agvsfggaaq inatgisigf nfafnnalys tvtisdngyi tfgstspaga
       61 ttpissgtay sgaisgfgan lagniqlgas taylndgadi kylttgsags qvftveyknm
      121 krrnlttnld gfvnfqirly eadmrieiqy kswttasats ttgqvglrgl tntsfsnrig
      181 pwsatapgva nnntialnnt vgggpaantm ftwtpscfnt tnlvtnlqvd nttvnfswta
      241 pafetasfvd yiwevretvs gttiggptnt sltsasitgl vagtsytffv rssckpfaqc
      301 itgsltplcs tpvypysenf egvtvpaipn ctstvvttga amitvnnvvp yygftnknlk
      361 tasvaatdtw fftrlislta gntyrvsyky ggsrelaqfn qrmqvkigtv ntaagmttll
      421 anhdaikssp ntftfhfvap gtgnyylgfn gyaafnqgyl qideislgdp tcspptsltp
      481 asvtynsaiv gwtapspaps agyeyyvsts atapiatssi sgviagtvtt ltgltsstty
      541 yiwvrsncag vysawstlas fttlapppsp ctpgptsvds qgiinvtigs innttgaetg
      601 nygnytnlst nisqnttvnm sirfsiagfv gsgyytriwi dynddgdffd agetvfdngg
      661 aelpnglnni sfnvpltaal gphrmrigas dannlsqvva pattngpcyt gtwgtfedys
      721 vfvtsppppl tisgsftsyc nggssplitl tagagsydnf vwnpsvgvtg daisgwvfnp
      781 tnsgvntytl tatqasglfl sntvtytvtv ydvptpivft pstipvcagi ttpivatggi
      841 vngavvieed fnsptnsfvs fntstggtrl gpagstwtlr pspylepfns ftfssndssq
      901 ffmtnsdaqg sggntnteiv spdfdlstft nvsmsfwhhy ddlggtaevq imidtngtld
      961 lnasevwttl rvynsdqggr tsfvneiidl sayaipanth vrikfkyida pyawwwcidn
     1021 fkitgstpal ltwapttglw ldagatvpya gtatgvvyak lnadqtyvat aaaltppfcd
     1081 tstpvtvtvt qagaatgnqt lscgdtaiss nitltgyvps vpativgwqm adnpgftgat
     1141 tipgsagkdi ltpadvtgls sttyiramiq gcptlfsnti tityptvtwn gawnpgpptp
     1201 tdnvtvtsgt ltlsadlsic slkvnngatv nvnpgvtltv ngivnvaatg alnflddtty
     1261 pfsgaaslmq nplattntni ssatnvsyqr tiytrkfdyt ywssplsntv lnvfapgtla
     1321 dkyirfdsna yvwtypsiis tmtpgvgygi rgpqghpvnt yqesihifkg tpnngnysvt
     1381 vynnsagndl nfignpypsp lsadllmdgn pgvlgtlgtg ttfyfwthnt lfngsnyvss
     1441 dfatynrtgg tlgaiptaga pglnnavptg iissgqgfma rvvtagtstv tfrnsmrvag
     1501 sntqffrmsa tqekhrlwld ltdsagdkfk qllvgyvena tneyengfdg evleagnpis
     1561 fysvvdsknl tiqgrslpfd sndqvplgyr tdaagsftia lsntdgllse vttpiyiedt
     1621 vlntyhdlks gsytfvteag tfnnrfvlry tnllnvspvd fqendvivfk qlddiriets
     1681 kiniqsvkvy dvqgrliisr nnvnsksill pnlglasqvl mvqiatvngd vvnkkiif
//
LOCUS       WP_235924388             497 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4055 domain-containing protein [Brucella anthropi].
ACCESSION   WP_235924388
VERSION     WP_235924388.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024661.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13264.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..497
                     /product="DUF4055 domain-containing protein"
                     /calculated_mol_wt=55186
     Region          260..407
                     /region_name="DUF4055"
                     /note="Domain of unknown function (DUF4055); pfam13264"
                     /db_xref="CDD:433070"
ORIGIN      
        1 madtdylats adykamlgyw tkvaairggv damrkagaay lpqfpnesdp nydyrlansk
       61 ftdiysdive nlaskpfske vtlandkvpe aikvvtedid gggnhlhvfa dtvffngihn
      121 aidwilvdyp tvpqgatlad ekrmgarpyw vnipatdmlw veskvingke qftyakiyep
      181 vtqrdsagke qcidrvrili rdeleggqyg paryeiweka ttnnagwsli aegpisigvi
      241 alvpfftgrr egstwrirpp mrnvaelqve hyqqetnlks akeltafpml agngvdppkd
      301 engepimapi gpsvvlyapp tpdgtksgqw qfiepsatsl kflseevdkt etqmrelgrq
      361 pltagtsgit qvaaafasqk sasavqawaf mlkdcleray vftsmwlkvk leptvyvntd
      421 faielgedka pdtlltmner gklstqtlwq emkrrsilsp efdadeeekr imdelpaddt
      481 eddltaavtp pvkerae
//
LOCUS       WP_235924395             879 aa            linear   BCT 02-MAR-2025
DEFINITION  erythromycin esterase family protein [Brucella anthropi].
ACCESSION   WP_235924395
VERSION     WP_235924395.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 879)
  AUTHORS   Arthur,M., Autissier,D. and Courvalin,P.
  TITLE     Analysis of the nucleotide sequence of the ereB gene encoding the
            erythromycin esterase type II
  JOURNAL   Nucleic Acids Res 14 (12), 4987-4999 (1986)
   PUBMED   3523438
REFERENCE   2  (residues 1 to 879)
  AUTHORS   Ounissi,H. and Courvalin,P.
  TITLE     Nucleotide sequence of the gene ereA encoding the erythromycin
            esterase in Escherichia coli
  JOURNAL   Gene 35 (3), 271-278 (1985)
   PUBMED   3899861
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016994.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05139.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..879
                     /product="erythromycin esterase family protein"
                     /GO_process="GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /calculated_mol_wt=96676
     Region          7..216
                     /region_name="COG1926"
                     /note="Predicted phosphoribosyltransferase [General
                     function prediction only]"
                     /db_xref="CDD:441529"
     Region          240..428
                     /region_name="DLH"
                     /note="Dienelactone hydrolase [Secondary metabolites
                     biosynthesis, transport and catabolism]; COG0412"
                     /db_xref="CDD:440181"
     Region          454..863
                     /region_name="YbfO"
                     /note="Erythromycin esterase homolog [Secondary
                     metabolites biosynthesis, transport and catabolism];
                     COG2312"
                     /db_xref="CDD:441886"
ORIGIN      
        1 mmnnfqfsdr tdagrrlaar lleakpkepi vyalprggvp valeialalr apldlilvrk
       61 igapgapeva lgavvegdpd evvinekvqi vtgatdayie rvkrhelsei qrrrslyldg
      121 rtqirpaght aivvddglat gatakaaiia mrsqgasrvi laipvgpeea laemrqfads
      181 viclhtvvkf savgefyedf hqltdeettg ylrqgwklad esqigtvarr vaippcnllg
      241 dlyvptnpkg ivvfahgsgs srlsprnisv arrlnhegfa tllldllttd eaadrhnvfd
      301 isllagrlld asvwiigepd iadlpmgffg astgaaaall aaskipervk aivsrggrpd
      361 lagsalatva sptllivgsk deqvlklnnn alssikcdke ikivpgathl feepgalema
      421 igmavewfqh ylttsssdap slqlshtvst iskiraaver lpsvddeefa cafdkfadar
      481 lvllgeashg tsefyqsraa itrrlikkyn ftivaveadw pdaaainrrv qnrparssaw
      541 apftrfptwv wrnkdfeafv sflrntnagk paseqvgffg ldlynmtasi gevvsyldrv
      601 dkdaatrarn rygcisswsq epaaygrasl srgyalcekp virilvdlle keleyckmdg
      661 fdffeakqna rlvasaeryy ramyygahes wnlrdqhmfn tlqnimtqsg ptskavvwah
      721 nshigdarft dmgkerseln lgqlcrqayg rsaaligfgt htgtvaaapd wnapmerkqi
      781 rpslsdsyes llhdvgserf lldlragrnd evrealskpr lqryigviyr peterwshys
      841 yaslanqyda fvwfdethai tplsttsvgg edemfpfgl
//
LOCUS       WP_235924446             161 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: transposase [Brucella].
ACCESSION   WP_235924446
VERSION     WP_235924446.1
KEYWORDS    RefSeq.
SOURCE      Brucella
  ORGANISM  Brucella
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group.
REFERENCE   1  (residues 1 to 161)
  AUTHORS   Vertes,A.A., Inui,M., Kobayashi,M., Kurusu,Y. and Yukawa,H.
  TITLE     Isolation and characterization of IS31831, a transposable element
            from Corynebacterium glutamicum
  JOURNAL   Mol Microbiol 11 (4), 739-746 (1994)
   PUBMED   8196545
REFERENCE   2  (residues 1 to 161)
  AUTHORS   van der Zee,A., Agterberg,C., van Agterveld,M., Peeters,M. and
            Mooi,F.R.
  TITLE     Characterization of IS1001, an insertion sequence element of
            Bordetella parapertussis
  JOURNAL   J Bacteriol 175 (1), 141-147 (1993)
   PUBMED   8093238
REFERENCE   3  (residues 1 to 161)
  AUTHORS   Johansen,E. and Kibenich,A.
  TITLE     Isolation and characterization of IS1165, an insertion sequence of
            Leuconostoc mesenteroides subsp. cremoris and other lactic acid
            bacteria
  JOURNAL   Plasmid 27 (3), 200-206 (1992)
   PUBMED   1325060
REFERENCE   4  (residues 1 to 161)
  AUTHORS   Cirillo,J.D., Barletta,R.G., Bloom,B.R. and Jacobs,W.R. Jr.
  TITLE     A novel transposon trap for mycobacteria: isolation and
            characterization of IS1096
  JOURNAL   J Bacteriol 173 (24), 7772-7780 (1991)
   PUBMED   1660454
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013753.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01610.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Brucella"
                     /db_xref="taxon:234"
     Protein         1..161
                     /product="transposase"
                     /calculated_mol_wt=17434
     Region          <19..158
                     /region_name="transpos_ISL3"
                     /note="ISL3 family transposase; NF033550"
                     /db_xref="CDD:468079"
ORIGIN      
        1 mktkgfvgks gvisqwaqrr rlaekanqsg lartpsarvi arlmttardd laksevilva
       61 aievnvsdlv vartaigdfq smirsktark ldewleaakd slvgsfaggv ekdldavrna
      121 iispwsngqt egqitrlkli krqmygrakl dllqarliga s
//
LOCUS       WP_235924452             109 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Brucella anthropi].
ACCESSION   WP_235924452
VERSION     WP_235924452.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..109
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=11750
     Region          <31..67
                     /region_name="HTH_18"
                     /note="Helix-turn-helix domain; pfam12833"
                     /db_xref="CDD:432818"
ORIGIN      
        1 mnalithfyr ksaasspkds ayqplvrqia pstslkriay qcgfndgtqf tkafkarfgl
       61 vpkdvakfga plltsapynf syaqqlsaqa kragltngqp mqlesmsla
//
LOCUS       WP_235924499             456 aa            linear   BCT 02-MAR-2025
DEFINITION  3-deoxy-D-manno-octulosonic acid transferase [Roseomonas harenae].
ACCESSION   WP_235924499
VERSION     WP_235924499.1
KEYWORDS    RefSeq.
SOURCE      Roseomonas harenae
  ORGANISM  Roseomonas harenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Roseomonas.
REFERENCE   1  (residues 1 to 456)
  AUTHORS   Chung,H.S. and Raetz,C.R.
  TITLE     Interchangeable domains in the Kdo transferases of Escherichia coli
            and Haemophilus influenzae
  JOURNAL   Biochemistry 49 (19), 4126-4137 (2010)
   PUBMED   20394418
REFERENCE   2  (residues 1 to 456)
  AUTHORS   Lobau,S., Mamat,U., Brabetz,W. and Brade,H.
  TITLE     Molecular cloning, sequence analysis, and functional
            characterization of the lipopolysaccharide biosynthetic gene kdtA
            encoding 3-deoxy-alpha-D-manno-octulosonic acid transferase of
            Chlamydia pneumoniae strain TW-183
  JOURNAL   Mol Microbiol 18 (3), 391-399 (1995)
   PUBMED   8748024
REFERENCE   3  (residues 1 to 456)
  AUTHORS   Belunis,C.J. and Raetz,C.R.
  TITLE     Biosynthesis of endotoxins. Purification and catalytic properties
            of 3-deoxy-D-manno-octulosonic acid transferase from Escherichia
            coli
  JOURNAL   J Biol Chem 267 (14), 9988-9997 (1992)
   PUBMED   1577828
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11445568
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Roseomonas harenae"
                     /db_xref="taxon:2692566"
     Protein         1..456
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /EC_number="2.4.99.-"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=47140
     Region          15..390
                     /region_name="KdtA"
                     /note="3-deoxy-D-manno-octulosonic-acid transferase [Cell
                     wall/membrane/envelope biogenesis]; COG1519"
                     /db_xref="CDD:441128"
ORIGIN      
        1 mstppepgwc aalpllawra attaaaplmp lwltrrarrg kedparlrer rgegadrpag
       61 pllwlhgasv gesqsalpli ealaatrpal hflvttgtvt aarlleerlp pslaarvqhr
      121 fapldvpghv arfldgwrpd aavfieseiw pnlilaaaar gvpmalvnar vsarsakgwg
      181 rmpgmarrlf gafrlviaqt eldaarlral gaesarawgn lkfaarplpa pepalaalrr
      241 aigarpvlla asthpgeeaq iaeahgllra rlpdlltiva prhpergpal arelasllaa
      301 degppplvlr sggalptpgt aiyvadtlge lgllyrvaga aliggsliph ggqnpleaar
      361 lgcpillgph tanftaiadr llgagaalrv adsaalaeaa alvltdplra rsmtsaaari
      421 aadagalper mavaietllp afslspsgtg aaagpg
//
LOCUS       WP_235924616             660 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Roseomonas harenae].
ACCESSION   WP_235924616
VERSION     WP_235924616.1
KEYWORDS    RefSeq.
SOURCE      Roseomonas harenae
  ORGANISM  Roseomonas harenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Roseomonas.
REFERENCE   1  (residues 1 to 660)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Roseomonas harenae"
                     /db_xref="taxon:2692566"
     Protein         1..660
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=69920
     Region          5..121
                     /region_name="PDC1_DGC_like"
                     /note="first PDC (PhoQ/DcuS/CitA) domain of
                     diguanylate-cyclase and similar domains; cd12914"
                     /db_xref="CDD:350339"
     Region          123..213
                     /region_name="PDC2_HK_sensor"
                     /note="second PDC (PhoQ/DcuS/CitA) domain of
                     methyl-accepting chemotaxis proteins, diguanylate-cyclase
                     and similar domains; cd18774"
                     /db_xref="CDD:350342"
     Region          <256..657
                     /region_name="PRK13557"
                     /note="histidine kinase; Provisional"
                     /db_xref="CDD:237425"
ORIGIN      
        1 meglhdlaqa rqqlleagdr sgvdaieaql iniarrgrfg vlqvgiiere grlawssvpd
       61 wqavdlsdre hfrvhregrr elfisapvvg rvsnqwsvqv trplrslagd fagvavvsmd
      121 pvelsqqlaa lqfgagssat vlrqdgiiia rsrdvlqalg qvipseaalr qaleasptgr
      181 lwiprsvfdg rpkltayrsp aglplvvsvl ldekqelvrt afvrpalrga aggisllala
      241 vvallllwie rqrtrsalel arhereaale qlaqaqrmea lgrlaggiah dfnnvlqail
      301 ggarsmqrrq rdpeaverla gmiaeaaerg asvtrrllaf arrgelrsvp vdvsellngl
      361 revlthtigp nirvrieasp tlpkvladpg qletvlvnla vnardamapl gggdlilsaa
      421 aednwadlgs vpslrpgvyl rlavtdtgtg mdattlarag epffttkpkg dgtglglama
      481 kgfaeqsgga lriesepdhg ttitlwlpca vgetaaeasp artpagpiaa grsselsgri
      541 lvvddepqvr avlanalrdh ghrvdeaqdg aaalirlgqc dllvtdlamp gmnglellra
      601 arerrpglpa llvtgyagda dtedlaeasg kgplillrkp idpdevaaha atllngaaas
//
LOCUS       WP_235924609             241 aa            linear   BCT 02-MAR-2025
DEFINITION  transglycosylase SLT domain-containing protein [Roseomonas
            harenae].
ACCESSION   WP_235924609
VERSION     WP_235924609.1
KEYWORDS    RefSeq.
SOURCE      Roseomonas harenae
  ORGANISM  Roseomonas harenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Roseomonas.
REFERENCE   1  (residues 1 to 241)
  AUTHORS   Koraimann,G.
  TITLE     Lytic transglycosylases in macromolecular transport systems of
            Gram-negative bacteria
  JOURNAL   Cell Mol Life Sci 60 (11), 2371-2388 (2003)
   PUBMED   14625683
REFERENCE   2  (residues 1 to 241)
  AUTHORS   Mushegian,A.R., Fullner,K.J., Koonin,E.V. and Nester,E.W.
  TITLE     A family of lysozyme-like virulence factors in bacterial pathogens
            of plants and animals
  JOURNAL   Proc Natl Acad Sci U S A 93 (14), 7321-7326 (1996)
   PUBMED   8692991
REFERENCE   3  (residues 1 to 241)
  AUTHORS   Thunnissen,A.M., Rozeboom,H.J., Kalk,K.H. and Dijkstra,B.W.
  TITLE     Structure of the 70-kDa soluble lytic transglycosylase complexed
            with bulgecin A. Implications for the enzymatic mechanism
  JOURNAL   Biochemistry 34 (39), 12729-12737 (1995)
   PUBMED   7548026
REFERENCE   4  (residues 1 to 241)
  AUTHORS   Koonin,E.V. and Rudd,K.E.
  TITLE     A conserved domain in putative bacterial and bacteriophage
            transglycosylases
  JOURNAL   Trends Biochem Sci 19 (3), 106-107 (1994)
   PUBMED   8203016
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013618.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01464.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Roseomonas harenae"
                     /db_xref="taxon:2692566"
     Protein         1..241
                     /product="transglycosylase SLT domain-containing protein"
                     /calculated_mol_wt=25612
     Region          85..204
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
ORIGIN      
        1 miglgslaag catadepqla aqpapppadv pdgvrpadvp agvrtvalvg pgttmrarpa
       61 vlrredidnp raacldatrq aeqahgipeg lmvaialaes glhgyamnig grpyypenrd
      121 earrvyhsar pgqfvmagcv qvnarvharn sdwpldpwra adwgasylrq hydtygnwad
      181 airrwngalp sgnalacrvq aklqvtnpds kvldnvpcgn taiarerrng aalleiaeaa
      241 e
//
LOCUS       WP_235924655             552 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Roseomonas harenae].
ACCESSION   WP_235924655
VERSION     WP_235924655.1
KEYWORDS    RefSeq.
SOURCE      Roseomonas harenae
  ORGANISM  Roseomonas harenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Roseomonas.
REFERENCE   1  (residues 1 to 552)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Roseomonas harenae"
                     /db_xref="taxon:2692566"
     Protein         1..552
                     /product="AMP-binding protein"
                     /calculated_mol_wt=60163
     Region          72..547
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(212,215..220,222..223)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(215,329..330,351..356,431,443,446,457,540)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(215,256..257,304,306..307,310,329..330,351..356,431,
                     443,446,454..457,521)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(256,306..307,310,329,454..456,515,521)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
ORIGIN      
        1 mqtdtmtaew sgatpdfaps ahvdtfprdn lpprdqwpel lfdledyhyp trlncavefl
       61 drnvetgrgd hpalitpeet ltyrqlqnrv dricnvltrd lgmvpgnrvm lrsannawmt
      121 atylavlkag gvvvatmpll rakelgqmle karishalcd vklreemela aakapllkhl
      181 vywgngdlea rcaaqpegfa acdtaaddvc ligftsgttg lpkgtmhfhr dmlaicdgys
      241 rhvlrpaped rfigsaplaf tfglgglvlf pfrigatgil lekagpdell paiekhrati
      301 cftaptayrv maqkvgqfdi sslrkcvsag etlpkaifda wekatglrlm dgiggtemlh
      361 ifvaapeetl rpgctglavp gyqakvvddd gqevprgtpg wlairgpigc ryladprqas
      421 yvrhgwnipg dvyiqdedgf fryqgrgddm ivaagyniag pevegallth pavrecgvvg
      481 apdgkggmlv kayvalkgdy lasdvlvkal qdhvkaeiap ykapreiefl ealprtesgk
      541 lqrfalrkma cq
//
LOCUS       WP_235924696             220 aa            linear   BCT 02-MAR-2025
DEFINITION  chemotaxis protein CheB [Roseomonas harenae].
ACCESSION   WP_235924696
VERSION     WP_235924696.1
KEYWORDS    RefSeq.
SOURCE      Roseomonas harenae
  ORGANISM  Roseomonas harenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Roseomonas.
REFERENCE   1  (residues 1 to 220)
  AUTHORS   West,A.H., Martinez-Hackert,E. and Stock,A.M.
  TITLE     Crystal structure of the catalytic domain of the chemotaxis
            receptor methylesterase, CheB
  JOURNAL   J Mol Biol 250 (2), 276-290 (1995)
   PUBMED   7608974
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013502.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01339.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Roseomonas harenae"
                     /db_xref="taxon:2692566"
     Protein         1..220
                     /product="chemotaxis protein CheB"
                     /GO_component="GO:0005737 - cytoplasm [Evidence IEA]"
                     /GO_function="GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA]"
                     /GO_function="GO:0008984 - protein-glutamate
                     methylesterase activity [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /GO_process="GO:0006935 - chemotaxis [Evidence IEA]"
                     /calculated_mol_wt=22821
     Region          <2..219
                     /region_name="PRK12555"
                     /note="chemotaxis-specific protein-glutamate
                     methyltransferase CheB"
                     /db_xref="CDD:237135"
ORIGIN      
        1 mpllrkitai grligdrgpa pqaalpasrs lparhplvai gastggpaal atllqglprd
       61 fpaaiviiqh vddrfaagma dwlrgyatmp vqlareddtp spgtvllaas dnhltlksas
      121 llgytreprd yayrpsvdvf fhsvarlwkg davgvlltgm grdgaqglqa lrakgchtia
      181 qdratsavyg mpkaaaeiga avdilplpgi aarligavar
//
LOCUS       WP_235924760             200 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6931 family protein [Roseomonas harenae].
ACCESSION   WP_235924760
VERSION     WP_235924760.1
KEYWORDS    RefSeq.
SOURCE      Roseomonas harenae
  ORGANISM  Roseomonas harenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Roseomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047077.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22011.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Roseomonas harenae"
                     /db_xref="taxon:2692566"
     Protein         1..200
                     /product="DUF6931 family protein"
                     /calculated_mol_wt=20770
ORIGIN      
        1 msdpttipgl pklaiplgpl lprleltaah lallegavda aagldrlaah gdmpeamrla
       61 ahalprreav wwccmcarav pdpalpaadt aallaaeawv rkpedairra amaaaqrtgf
      121 rspeawaavg afwsgdsmap egqplvppgp hmtgvaiagg vviaavrrrp eraeqrfprf
      181 laaardiaag gagrippeed
//
LOCUS       WP_235924622             238 aa            linear   BCT 02-MAR-2025
DEFINITION  YjbF family lipoprotein [Roseomonas harenae].
ACCESSION   WP_235924622
VERSION     WP_235924622.1
KEYWORDS    RefSeq.
SOURCE      Roseomonas harenae
  ORGANISM  Roseomonas harenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Roseomonas.
REFERENCE   1  (residues 1 to 238)
  AUTHORS   Sathiyamoorthy,K., Mills,E., Franzmann,T.M., Rosenshine,I. and
            Saper,M.A.
  TITLE     The crystal structure of Escherichia coli group 4 capsule protein
            GfcC reveals a domain organization resembling that of Wza
  JOURNAL   Biochemistry 50 (24), 5465-5476 (2011)
   PUBMED   21449614
REFERENCE   2  (residues 1 to 238)
  AUTHORS   Ferrieres,L., Aslam,S.N., Cooper,R.M. and Clarke,D.J.
  TITLE     The yjbEFGH locus in Escherichia coli K-12 is an operon encoding
            proteins involved in exopolysaccharide production
  JOURNAL   Microbiology (Reading) 153 (Pt 4), 1070-1080 (2007)
   PUBMED   17379715
REFERENCE   3  (residues 1 to 238)
  AUTHORS   Peleg,A., Shifrin,Y., Ilan,O., Nadler-Yona,C., Nov,S., Koby,S.,
            Baruch,K., Altuvia,S., Elgrably-Weiss,M., Abe,C.M., Knutton,S.,
            Saper,M.A. and Rosenshine,I.
  TITLE     Identification of an Escherichia coli operon required for formation
            of the O-antigen capsule
  JOURNAL   J Bacteriol 187 (15), 5259-5266 (2005)
   PUBMED   16030220
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022552.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11102.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Roseomonas harenae"
                     /db_xref="taxon:2692566"
     Protein         1..238
                     /product="YjbF family lipoprotein"
                     /calculated_mol_wt=25776
     Region          80..232
                     /region_name="YjbF"
                     /note="Group 4 capsule polysaccharide lipoprotein gfcB,
                     YjbF; pfam11102"
                     /db_xref="CDD:431654"
ORIGIN      
        1 mrgrgrapil pgmrrlllll llplgacesa pdmgemgrsa enllrasifl pprqdgfapr
       61 rheapkgtip eleastadgp allvtygsqr kvmtmiqgng eqrmwrsddg tvvatdgarv
      121 vatagtvtsl aatrfdspdp lddvtaladr pamarrvvdl apssrdpnrm rfgvtlecrm
      181 ratrvteglf veercgggar fvnrywadae tgavwrseqw vgmdgrpmti evisppan
//
LOCUS       WP_235924873              56 aa            linear   BCT 02-MAR-2025
DEFINITION  NepR family anti-sigma factor [Roseomonas harenae].
ACCESSION   WP_235924873
VERSION     WP_235924873.1
KEYWORDS    RefSeq.
SOURCE      Roseomonas harenae
  ORGANISM  Roseomonas harenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Roseomonas.
REFERENCE   1  (residues 1 to 56)
  AUTHORS   Campagne,S., Damberger,F.F., Kaczmarczyk,A., Francez-Charlot,A.,
            Allain,F.H. and Vorholt,J.A.
  TITLE     Structural basis for sigma factor mimicry in the general stress
            response of Alphaproteobacteria
  JOURNAL   Proc Natl Acad Sci U S A 109 (21), E1405-E1414 (2012)
   PUBMED   22550171
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037848.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18557.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..56
                     /organism="Roseomonas harenae"
                     /db_xref="taxon:2692566"
     Protein         1..56
                     /product="NepR family anti-sigma factor"
                     /GO_function="GO:0016989 - sigma factor antagonist
                     activity [Evidence IEA]"
                     /calculated_mol_wt=6207
     Region          27..51
                     /region_name="NepR"
                     /note="Anti-sigma factor NepR; pfam18557"
                     /db_xref="CDD:465800"
ORIGIN      
        1 maktvqgtvn grgsaapdaa fdlwlqrglh qmfddvmrep ipeellrlie qdreqg
//
LOCUS       WP_235924912             345 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Roseomonas
            harenae].
ACCESSION   WP_235924912
VERSION     WP_235924912.1
KEYWORDS    RefSeq.
SOURCE      Roseomonas harenae
  ORGANISM  Roseomonas harenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Roseomonas.
REFERENCE   1  (residues 1 to 345)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Roseomonas harenae"
                     /db_xref="taxon:2692566"
     Protein         1..345
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=36134
     Region          50..320
                     /region_name="PRK11151"
                     /note="DNA-binding transcriptional regulator OxyR;
                     Provisional"
                     /db_xref="CDD:182999"
ORIGIN      
        1 mrpvlsftir rlvagvdati sargdkdkdk llhdpigivy eghamslagl slrdleylla
       61 vaehrhfgra adrcgvsqpa lssqirkles llgtqvferl pgrvlvtarg eavlarasav
      121 vrearallla araeeaplag pfrlgaiptl gpyllphllr pireafpamr pvlseartae
      181 lrdslksgal daalccagpv daalrslplf lepfllmhvp gpapaapgtl pppdelllle
      241 eghclhdqal avcgmeaprg trhatgleml rhmvaagegt slmpalaaaa lgpveglvaf
      301 tplpegvgre vtllvrasdp raaamdalaa lmrdgspaav rplag
//
LOCUS       WP_235924915             836 aa            linear   BCT 02-MAR-2025
DEFINITION  cbb3-type cytochrome c oxidase subunit I [Roseomonas harenae].
ACCESSION   WP_235924915
VERSION     WP_235924915.1
KEYWORDS    RefSeq.
SOURCE      Roseomonas harenae
  ORGANISM  Roseomonas harenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Roseomonas.
REFERENCE   1  (residues 1 to 836)
  AUTHORS   Gopalasingam,C.C., Johnson,R.M., Chiduza,G.N., Tosha,T.,
            Yamamoto,M., Shiro,Y., Antonyuk,S.V., Muench,S.P. and Hasnain,S.S.
  TITLE     Dimeric structures of quinol-dependent nitric oxide reductases
            (qNORs) revealed by cryo-electron microscopy
  JOURNAL   Sci Adv 5 (8), eaax1803 (2019)
   PUBMED   31489376
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 836)
  AUTHORS   Tsukihara,T., Aoyama,H., Yamashita,E., Tomizaki,T., Yamaguchi,H.,
            Shinzawa-Itoh,K., Nakashima,R., Yaono,R. and Yoshikawa,S.
  TITLE     The whole structure of the 13-subunit oxidized cytochrome c oxidase
            at 2.8 A
  JOURNAL   Science 272 (5265), 1136-1144 (1996)
   PUBMED   8638158
REFERENCE   3  (residues 1 to 836)
  AUTHORS   Castresana,J., Lubben,M., Saraste,M. and Higgins,D.G.
  TITLE     Evolution of cytochrome oxidase, an enzyme older than atmospheric
            oxygen
  JOURNAL   EMBO J 13 (11), 2516-2525 (1994)
   PUBMED   8013452
REFERENCE   4  (residues 1 to 836)
  AUTHORS   Papa,S., Capitanio,N., Glaser,P. and Villani,G.
  TITLE     The proton pump of heme-copper oxidases
  JOURNAL   Cell Biol Int 18 (5), 345-355 (1994)
   PUBMED   8049679
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012343.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00115.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..836
                     /organism="Roseomonas harenae"
                     /db_xref="taxon:2692566"
     Protein         1..836
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /GO_process="GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /calculated_mol_wt=89890
     Region          31..520
                     /region_name="Heme_Cu_Oxidase_I"
                     /note="Heme-copper oxidase subunit I. Heme-copper oxidases
                     are transmembrane protein complexes in the respiratory
                     chains of prokaryotes and mitochondria which catalyze the
                     reduction of O2 and simultaneously pump protons across the
                     membrane. The superfamily is...; cl00275"
                     /db_xref="CDD:469701"
     Site            order(43,104,114,121,124,179..180,186,190)
                     /site_type="active"
                     /note="D-pathway [active]"
                     /db_xref="CDD:238461"
     Site            order(58,62,78,85,89..90,94,149,394,401,404..405,460..461,
                     492)
                     /site_type="other"
                     /note="Low-spin heme binding site [chemical binding]"
                     /db_xref="CDD:238461"
     Site            order(250,255..256,387,391..392,460)
                     /site_type="other"
                     /note="Putative water exit pathway"
                     /db_xref="CDD:238461"
     Site            order(263,312..313,399)
                     /site_type="active"
                     /note="Binuclear center (active site) [active]"
                     /db_xref="CDD:238461"
     Site            order(263,267,278,312..313,338,341)
                     /site_type="active"
                     /note="K-pathway [active]"
                     /db_xref="CDD:238461"
     Site            order(313,391..392,460..461)
                     /site_type="other"
                     /note="Putative proton exit pathway"
                     /db_xref="CDD:238461"
     Region          649..815
                     /region_name="Heme_Cu_Oxidase_III_like"
                     /note="Heme-copper oxidase subunit III. Heme-copper
                     oxidases are transmembrane protein complexes in the
                     respiratory chains of prokaryotes and mitochondria which
                     couple the reduction of molecular oxygen to water to,
                     proton pumping across the membrane. The...; cl00211"
                     /db_xref="CDD:444752"
     Site            order(655..656,670,674..675,764..765,768,772)
                     /site_type="other"
                     /note="Subunit I/III interface [polypeptide binding]"
                     /db_xref="CDD:238227"
ORIGIN      
        1 msdlpnplpr ppeelgrleh awafprgisv iteinnnlig plflatalmf lflagllgvl
       61 irlqlavpgm nilsadtynq vftthgvvmm flfavpvvea vgitllpaml garemptprl
      121 gayaywiyli ggsaffaslf fgaapdggwf myppltgkaa spgvntdmyl lgigfieisa
      181 iagaielmtg ilrcrapgmt lgrmpvfawa mlvfagmvif afpaviiast llelerafdw
      241 pffiperggd pllwqhlfwf fghpevyiif lpaagmvsmi vpamararli ghslvvlalv
      301 gtaflsfglw vhhmyttgip glslsffasa gfavsvpsgi qvfawiatfa sgkkvriatp
      361 tlfvlgfifi ftlggltgvm vsvtpfdwqa hdtyfivahl hyvliggmvf pvlaalyywa
      421 paigtplser lgkwvfwllf lgvnltffpm hisgfmgmpr riytypagmg levwnalsti
      481 galvvlaggv llfidiarnf rmsggsgnlw dagtlewlpn enygprslaa vdsryplwrk
      541 pglaaeveag ghylprtitg lreglvvspa egipqyvavl pgpswshiva aigtagfflv
      601 ltvelvvpai afavlalgaf lywlwtatdf gpigegrgdi gggivlptyv tgpistswwv
      661 mvglmlvmgs cyacligsyl flwlvngdgm wppagmglpl lergglalll yalaagtmll
      721 agralrrgda lpawampval llllagygad lsallgsgqr pgqhthaais ytllawhgai
      781 vavavimaly tqarswagmv dgtrrltfdn tmlfwlyvag qgavgivllh gfprll
//
LOCUS       WP_235924950             189 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein [Roseomonas
            harenae].
ACCESSION   WP_235924950
VERSION     WP_235924950.1
KEYWORDS    RefSeq.
SOURCE      Roseomonas harenae
  ORGANISM  Roseomonas harenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Roseomonas.
REFERENCE   1  (residues 1 to 189)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Roseomonas harenae"
                     /db_xref="taxon:2692566"
     Protein         1..189
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=19791
     Region          31..>189
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mktvmmraaa lllgaaplaa haqtaqpgpt lqavrakgqv dcgghpgapg fgvmdsrgiy
       61 rgldadtcra iaaavfgdaa karfttvtss trltalqagq idvlprtttw shgrdasngi
      121 nftainfydg qgfmvrksln isqakeldga sicittgttt elnladwara nnvtfrpvvf
      181 ennvetrha
//
LOCUS       WP_235924972             677 aa            linear   BCT 02-MAR-2025
DEFINITION  right-handed parallel beta-helix repeat-containing protein
            [Roseomonas harenae].
ACCESSION   WP_235924972
VERSION     WP_235924972.1
KEYWORDS    RefSeq.
SOURCE      Roseomonas harenae
  ORGANISM  Roseomonas harenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Roseomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024627.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13229.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Roseomonas harenae"
                     /db_xref="taxon:2692566"
     Protein         1..677
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /calculated_mol_wt=70345
     Region          <164..>329
                     /region_name="NosD"
                     /note="Nitrous oxide reductase accessory protein NosD,
                     contains tandem CASH domains [Inorganic ion transport and
                     metabolism]; COG3420"
                     /db_xref="CDD:442646"
     Region          422..665
                     /region_name="COG2931"
                     /note="Ca2+-binding protein, RTX toxin-related [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:442175"
ORIGIN      
        1 maqygvvsgs kpagaielav gsnyqqivns aptgstfwft sgthrevsiq pkdgdvflga
       61 qgavlngsel vtsfaksgsa wvisgqtqeg arnltgytad gaqrggfpet vffddkpltp
      121 vdalsklkag tfyfdygadk iylgsdptgh kvetgqssfa fngtadnvti knltiekyna
      181 paqhsavdgg sgdgwviqnn eirliygvga nigdngkiig nyihdngemg ldggganivv
      241 qgneiarngy wsgidmsweg ggtkftettn llvkdnyshd nagnglwtdi nnykttydgn
      301 lvinnalggi sheisydavi knntvigngf nsigdgtagn pvwlwggqiq vhnspnvevf
      361 gnyvnstnag ngislieedr gsgdrgayli rnenihdnii vnasgnggng gesnvnnsay
      421 idggstwnnn kfyttdghfn wgdasntytq feaattgtns fgsassapaa pnlsrwmpgs
      481 statpaptpv edttpaptpt ptpapttpap tpapaptptp ttgnsadilg tksnntlngt
      541 skgekisglg gndtidgkag ndtidggtgn dkinggtgnd kitggagsdt ltggagndqf
      601 ifskgfgsdr iqefyaegtg tnhdvlvfsh dlfkdfadvm ahaktvgqnt visigsdqlt
      661 ivdtvkaefh adhvwfi
//
LOCUS       WP_235925020             335 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4340 domain-containing protein [Roseomonas harenae].
ACCESSION   WP_235925020
VERSION     WP_235925020.1
KEYWORDS    RefSeq.
SOURCE      Roseomonas harenae
  ORGANISM  Roseomonas harenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Roseomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025598.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14238.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Roseomonas harenae"
                     /db_xref="taxon:2692566"
     Protein         1..335
                     /product="DUF4340 domain-containing protein"
                     /calculated_mol_wt=35520
     Region          74..266
                     /region_name="DUF4340"
                     /note="Domain of unknown function (DUF4340); pfam14238"
                     /db_xref="CDD:433800"
ORIGIN      
        1 mplnrrhlii lggsavivag aaallvpqdg appppsqapl afpalagrlq aaqrielrqg
       61 gqslalqrgp gdvwtlpakg gypargervr ellvgltelr laerrtadpe slsrlgldep
      121 gapgstalll rvldgagval aelvigrrrt rtqggvpesa yvrlpaenqs flaegripvd
      181 adaqlwidre ianipnervl rviavrdgnt vellredgpd grlrivlpgd appaddvsld
      241 evgraleglt lldvrtaaea pgepagegrf iltdnlivta rmrsaggdvw mtleatggde
      301 aarlaarwrg wayqvgawkl pafapsletl rkreg
//
LOCUS       WP_235925049             210 aa            linear   BCT 02-MAR-2025
DEFINITION  antibiotic biosynthesis monooxygenase [Roseomonas harenae].
ACCESSION   WP_235925049
VERSION     WP_235925049.1
KEYWORDS    RefSeq.
SOURCE      Roseomonas harenae
  ORGANISM  Roseomonas harenae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Roseomonas.
REFERENCE   1  (residues 1 to 210)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015925.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03992.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Roseomonas harenae"
                     /db_xref="taxon:2692566"
     Protein         1..210
                     /product="antibiotic biosynthesis monooxygenase"
                     /calculated_mol_wt=22924
ORIGIN      
        1 mavhvmisks hlagsgkdla lrirdhvvpl vqgrpgfrgy cvfvaeqgda acsvsifddg
       61 esareadgri rewsgvhmrd lvagapevlg geaafqavpe pqeqqkdrhd alfavirhyq
      121 glpgqtetmh slvsehtlpa itqaegfrgf yafrdeedpn qaisftlfdr renavgahee
      181 vlsimreqla elayqepevv mgetvvlvag
//
LOCUS       WP_235925244             203 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Actinomyces marmotae].
ACCESSION   WP_235925244
VERSION     WP_235925244.1
KEYWORDS    RefSeq.
SOURCE      Actinomyces marmotae
  ORGANISM  Actinomyces marmotae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Actinomycetales; Actinomycetaceae; Actinomyces.
REFERENCE   1  (residues 1 to 203)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 203)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Actinomyces marmotae"
                     /db_xref="taxon:2737173"
     Protein         1..203
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=21113
     Region          23..174
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
     Site            order(103..105,115..116)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
ORIGIN      
        1 mpsgsmerla ptgarlremr agdldavaal eaelfggeaw spallraela atqgrgadrh
       61 yivvedgadg edradgadap railgyaglw vgdgrgdadl ltiataarar rlglaramld
      121 hlidrargag cgavlleara sndaaqalyl srgftligrr rryysapied avvmrlalre
      181 pghqttgaae rpagvgpvgs eav
//
LOCUS       WP_235925291             400 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase, partial [Actinomyces marmotae].
ACCESSION   WP_235925291
VERSION     WP_235925291.1
KEYWORDS    RefSeq.
SOURCE      Actinomyces marmotae
  ORGANISM  Actinomyces marmotae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Actinomycetales; Actinomycetaceae; Actinomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024700.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13304.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Actinomyces marmotae"
                     /db_xref="taxon:2737173"
     Protein         <1..400
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
     Region          <6..386
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
ORIGIN      
        1 eresraaaer aqerrarqll vaqrvrdear raaeagrewa aeaadrraav eaeraeslea
       61 trevrdeidr ltkeiaaltd aayreeiara ehrtrleala eraltelgle ldplveefgp
      121 hmpvpeigqd daepapgpse ppgacepgaa epgegpgarr aprtptarpg rpyaraeqer
      181 rlarakrdla rlgkvnplaf eehaalaqrh rflaeqladl krsradllgi veeidarvqe
      241 vftsayqdta refasvfdrl fpggegrlvl tdpgdmlttg ieiearpagk kvkrlsllsg
      301 gerslaaval liaifkarps pfyvmdevea alddtnlgrl leiftelres sqliiithqk
      361 rtmevadaly gitmrdgvtq avsqrlardr gaggapatgg
//
LOCUS       WP_235925319             181 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Streptococcus catagoni].
ACCESSION   WP_235925319
VERSION     WP_235925319.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus catagoni
  ORGANISM  Streptococcus catagoni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 181)
  AUTHORS   Mullin,D.A., Zies,D.L., Mullin,A.H., Caballera,N. and Ely,B.
  TITLE     Genetic organization and transposition properties of IS511
  JOURNAL   Mol Gen Genet 254 (4), 456-463 (1997)
   PUBMED   9180700
REFERENCE   2  (residues 1 to 181)
  AUTHORS   Fischer,J., Maier,H., Viell,P. and Altenbuchner,J.
  TITLE     The use of an improved transposon mutagenesis system for DNA
            sequencing leads to the characterization of a new insertion
            sequence of Streptomyces lividans 66
  JOURNAL   Gene 180 (1-2), 81-89 (1996)
   PUBMED   8973350
REFERENCE   3  (residues 1 to 181)
  AUTHORS   Zekri,S. and Toro,N.
  TITLE     Identification and nucleotide sequence of Rhizobium meliloti
            insertion sequence ISRm6, a small transposable element that belongs
            to the IS3 family
  JOURNAL   Gene 175 (1-2), 43-48 (1996)
   PUBMED   8917074
  REMARK    Erratum:[Gene 1997 Mar 25;188(1):149]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01527.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Streptococcus catagoni"
                     /db_xref="taxon:2654874"
     Protein         1..181
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=21025
     Region          11..57
                     /region_name="HTH_28"
                     /note="Helix-turn-helix domain; pfam13518"
                     /db_xref="CDD:463908"
     Region          57..>101
                     /region_name="InsE"
                     /note="Transposase InsE and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2963"
                     /db_xref="CDD:442203"
ORIGIN      
        1 msrrerfspy ekkaclnyin snrsraeicn nlhiststiq dwatiykkyg ilgfnkktkn
       61 rsyskefklk lvrkcisgea ssvdlghqyn issgllrkwi rmsnanrelk dynpkqevym
      121 aearrkttid ecqeivnyci ghnrnyketa alynisylsg vheksvahlf cttdlikqtl
      181 f
//
LOCUS       WP_235925390             262 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Brucella
            pseudintermedia].
ACCESSION   WP_235925390
VERSION     WP_235925390.1
KEYWORDS    RefSeq.
SOURCE      Brucella pseudintermedia (Ochrobactrum pseudintermedium)
  ORGANISM  Brucella pseudintermedia
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13407.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Brucella pseudintermedia"
                     /db_xref="taxon:370111"
     Protein         1..262
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=29015
     Region          2..257
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mldnryfssm aasfetvars rnlvpvvast lrdpqqerst vetliahnid alliagatdp
       61 dsvaelceka hlkhvnvdlp gkhgasvisd nydgarqltr qiaerrprre ensfyfiggv
      121 dsdhntrarv qgyqdelaaq nlpvhagtif tegydpdiaa gairaiyrel nglpealfvn
      181 stspfegivs flktlpvdev recsigcfdw dpfievlhfp vvmarqnvqa mierafelld
      241 epahmtdqpe mipteliipr gv
//
LOCUS       WP_235925461             869 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail length tape measure family protein [Brucella
            pseudintermedia].
ACCESSION   WP_235925461
VERSION     WP_235925461.1
KEYWORDS    RefSeq.
SOURCE      Brucella pseudintermedia (Ochrobactrum pseudintermedium)
  ORGANISM  Brucella pseudintermedia
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 869)
  AUTHORS   Pedersen,M., Ostergaard,S., Bresciani,J. and Vogensen,F.K.
  TITLE     Mutational analysis of two structural genes of the temperate
            lactococcal bacteriophage TP901-1 involved in tail length
            determination and baseplate assembly
  JOURNAL   Virology 276 (2), 315-328 (2000)
   PUBMED   11040123
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06791.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..869
                     /organism="Brucella pseudintermedia"
                     /db_xref="taxon:370111"
     Protein         1..869
                     /product="phage tail length tape measure family protein"
                     /calculated_mol_wt=92796
     Region          160..>255
                     /region_name="TMP_2"
                     /note="Prophage tail length tape measure protein;
                     pfam06791"
                     /db_xref="CDD:429120"
     Region          <358..622
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          505..827
                     /region_name="tape_meas_lam_C"
                     /note="phage tail tape measure protein, lambda family;
                     TIGR01541"
                     /db_xref="CDD:273681"
ORIGIN      
        1 magnqddivi gvsldtktik tgvnrvvgdi dyitqaasrs fdalgkkidk aiptsvqtri
       61 qnmvgigtks tkewtgalaq qgaeleklrl kynpifaavk qyqasvvdiq qahrigaisa
      121 demttaiqre rkatldsiaa ikqrngavas mrtansgpnr fntaniaaqf qdiavtsamg
      181 mspiqialqq gtqlsavlne mgrgkdvvrg lgaafasvvs pvslvtigvi aagaalaqyv
      241 asagdvktad diikqheeni krlgpayeqa ikeqqkyate spavvgislk ddqkqalekq
      301 lkdardavnr ifaatmapnd stsvadifkp aeqamatffa svqdgapkva afreeigrla
      361 etgkltqdaa adllkftdta ydsesrlgsv sgevdryaaa fgalqdainr vssakardea
      421 qklydqfkdg klsvdelrka lgdlsanapn lqshveeilr lskaaanaka eidgiwkgap
      481 gregrhmgpg ldpksfndrf ggnqdaidal erqrkelekk pkrtaedrka erdanayrdl
      541 vksaqdridq lkleeqlvgk tgvaaetmrm klellqraqd kgrnvsaaqr teieklaeay
      601 gkaaekvaam slaeelqfer aqmfrspteq rvhgqlrsag inpdsdygkm lagqirlnek
      661 laeakdltld faqgftqdlm ngvsamdala naagrladkl idmalnqain slfqnlaggl
      721 gggspfansg qvanafasgi gglwadggyt gqggkydpag ivhkgeyvvp knivdrigvp
      781 niqrmfsgya ggglvggprv psipsaanen gnggmrvdvg vsvdndgnlq ayvknisqqt
      841 tkrgikaydk tgpirlrrds qkaktwgvv
//
LOCUS       WP_235925581             317 aa            linear   BCT 02-MAR-2025
DEFINITION  lysylphosphatidylglycerol synthase domain-containing protein
            [Pontibacter burrus].
ACCESSION   WP_235925581
VERSION     WP_235925581.1
KEYWORDS    RefSeq.
SOURCE      Pontibacter burrus
  ORGANISM  Pontibacter burrus
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Pontibacter.
REFERENCE   1  (residues 1 to 317)
  AUTHORS   Staubitz,P., Neumann,H., Schneider,T., Wiedemann,I. and Peschel,A.
  TITLE     MprF-mediated biosynthesis of lysylphosphatidylglycerol, an
            important determinant in staphylococcal defensin resistance
  JOURNAL   FEMS Microbiol Lett 231 (1), 67-71 (2004)
   PUBMED   14769468
REFERENCE   2  (residues 1 to 317)
  AUTHORS   Kristian,S.A., Durr,M., Van Strijp,J.A., Neumeister,B. and
            Peschel,A.
  TITLE     MprF-mediated lysinylation of phospholipids in Staphylococcus
            aureus leads to protection against oxygen-independent neutrophil
            killing
  JOURNAL   Infect Immun 71 (1), 546-549 (2003)
   PUBMED   12496209
REFERENCE   3  (residues 1 to 317)
  AUTHORS   Peschel,A., Jack,R.W., Otto,M., Collins,L.V., Staubitz,P.,
            Nicholson,G., Kalbacher,H., Nieuwenhuizen,W.F., Jung,G.,
            Tarkowski,A., van Kessel,K.P. and van Strijp,J.A.
  TITLE     Staphylococcus aureus resistance to human defensins and evasion of
            neutrophil killing via the novel virulence factor MprF is based on
            modification of membrane lipids with l-lysine
  JOURNAL   J Exp Med 193 (9), 1067-1076 (2001)
   PUBMED   11342591
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015651.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03706.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Pontibacter burrus"
                     /db_xref="taxon:2704466"
     Protein         1..317
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /calculated_mol_wt=34988
     Region          32..301
                     /region_name="LPG_synthase_TM"
                     /note="Lysylphosphatidylglycerol synthase TM region;
                     cl46491"
                     /db_xref="CDD:480831"
ORIGIN      
        1 makllvvalt lyllyqaift apvtflswqt ivenalqspa rwlfivtall ipanwgfeak
       61 kwqllgqkle sisywrayra vmvgltlgfi tpnrlgdyag rvlelkskqr leaigaifig
      121 rfcqlvatvi vgsvgllyfi vtffwadypg vslslvflll tivaatllll ynaqalvavi
      181 saikplkklv symaimanyn saeiskllll slgrytvflv qfilllilfd vklsalqyvs
      241 gvagtffiks ivpsvsllsd lgvrelsamy lfgllgqerl qvlsaslslw llniavpsli
      301 glyfvlrlrf srkgvaa
//
LOCUS       WP_235925703             367 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Pontibacter burrus].
ACCESSION   WP_235925703
VERSION     WP_235925703.1
KEYWORDS    RefSeq.
SOURCE      Pontibacter burrus
  ORGANISM  Pontibacter burrus
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Pontibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Pontibacter burrus"
                     /db_xref="taxon:2704466"
     Protein         1..367
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=41461
     Region          18..351
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 methhhpski lmtadtvggv wtyalelira lapygtkval atmgeplnee qrretevidn
       61 ltlyesnykl ewmdnpwedv ekagewllql rdevqpdlih lnsmvhasld wgkpvmvvvh
      121 scvmswwkav kdedapkqwn kykelvakgl qaadfvvapt qammhqaeel ygpfkqqavi
      181 yngrgqhnfq fgrkepfvfs lgrvwdeakn ismlahiasd lqwpvyiage gkhpatgknv
      241 elenvhflgh ltnkevsdwl srasiyvlpa kyepfgltil eaamsgcalv vgktesqaei
      301 wgnaakyvdp nsaddlrdci nnliedefcr nimacrsvkr shgytadqma qdyshiykql
      361 lkavvtv
//
LOCUS       WP_235925737            1231 aa            linear   BCT 02-MAR-2025
DEFINITION  HAMP domain-containing protein [Pontibacter burrus].
ACCESSION   WP_235925737
VERSION     WP_235925737.1
KEYWORDS    RefSeq.
SOURCE      Pontibacter burrus
  ORGANISM  Pontibacter burrus
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Pontibacter.
REFERENCE   1  (residues 1 to 1231)
  AUTHORS   Aravind,L. and Ponting,C.P.
  TITLE     The cytoplasmic helical linker domain of receptor histidine kinase
            and methyl-accepting proteins is common to many prokaryotic
            signalling proteins
  JOURNAL   FEMS Microbiol Lett 176 (1), 111-116 (1999)
   PUBMED   10418137
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012876.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00672.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1231
                     /organism="Pontibacter burrus"
                     /db_xref="taxon:2704466"
     Protein         1..1231
                     /product="HAMP domain-containing protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=129557
     Region          170..233
                     /region_name="HAMP_2"
                     /note="HAMP domain; pfam18947"
                     /db_xref="CDD:465927"
     Region          269..>610
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
     Region          640..1186
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
ORIGIN      
        1 malgknlkls kdklisdveg stgneprpak aastrkptap avaadapaat ttvpagrtaq
       61 spgpknapdp vkvngngngn gkvtdeqllq npdyindqln rvlyaldafk kgdisvrltk
      121 qnndifaeia eaynsmvemi ggvggevsri skvagvegnl karasaenas gfwkdminni
      181 nglvdsiavp vlevgkvlkn isrgnldetf qipvsgdfkv maetinrtid nlnlfagevt
      241 rvalevgteg klggqasvpn vagvwkdltd nvntmaanlt lqvrdianvs tavakgdltq
      301 kvsvasrgei aqlkdnvnqm vdslnifade vtrvarevgt egrlggqakv pnvggvwkel
      361 tdnvntmasn ltsqmrdian vstavakgdl tqkitvnvrg emaelkdiin qmvdslnifa
      421 gevtrvarev gtegklggqa nvpkvegtwk eltenvnlma snltnqvrdi anvatavakg
      481 dltqkvsvdv kgelgdlkdi lnemvdrlnv fgaevsrvar evgtegilgg qanvpnvagi
      541 wkeltenvnl magnltnqvr dianvatava kgdlaqkvsv dvrgeladlk enlnqmvdsl
      601 nifadevtrv arevgtegkl ggqaivpnva gvwkdltdhv ntmaanltlq vrdianvata
      661 vakgdltqkv svdvkgelad lkmnlnqmvd slnifagevt rvarevgteg klggqasvpn
      721 vggvwkdltd nvntmasnlt tqvrgivkvv tavskgdltq klsleargev aelaetintm
      781 vidlnrlage vsrvarvagv egklteratl qgvggswkel vdtlndlles ivtpmldvsr
      841 vvraisegdl tqkveaqtag dildmanaln lavdnlnall geindsslvv gssseemagk
      901 glemnkvtld valamqqmae gaqnqalktd qafklieeim kgtketanra evvnktallg
      961 eessqiglkt vaevvknmee isssaaltak tievlstrsq eiskslgvit diaaqtnlla
     1021 lnaaieaara geagrgfavv aeeirklaeg srksaneiat lvedvkkdta saataistme
     1081 grvlkgknat feassafkni aassgetlrt aqdiltatev qkssigdvvk yveevvaiae
     1141 qtasgtqqva stakqlstsm qeltsssqnl ndiaadlqis isafklidgn iifnqakpkr
     1201 ltsipasngv trravtratg rggrsgnnns n
//
LOCUS       WP_235925788             309 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Pontibacter burrus].
ACCESSION   WP_235925788
VERSION     WP_235925788.1
KEYWORDS    RefSeq.
SOURCE      Pontibacter burrus
  ORGANISM  Pontibacter burrus
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Pontibacter.
REFERENCE   1  (residues 1 to 309)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 309)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Pontibacter burrus"
                     /db_xref="taxon:2704466"
     Protein         1..309
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=34597
     Region          103..267
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(158,160,162..163,215..216,236)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 mmnrksflkn sllgssllll pgpahhffsg ssakpvkltv rdpqqknica tcgtryatsk
       61 tatdtcpict derqyvgdgg qtwtsynnla kghsikiakl qenlyelkit pdfaigqkah
      121 lvvsksgnvl wdcipyldeq tityikalgg ikaiaishph yyslmaewaa afncplylhq
      181 ldkqwiqdks khlqlwegne lqlwdgmkvv htgghfdgst vmylphhgeg tlltgdtlyv
      241 ardrrhvsmm ysypnlvplp qkaikqissr iepltfdtih gafdgqliqt gakeafrrsv
      301 erylrifeg
//
LOCUS       WP_235925831             180 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6992 family protein [Pontibacter burrus].
ACCESSION   WP_235925831
VERSION     WP_235925831.1
KEYWORDS    RefSeq.
SOURCE      Pontibacter burrus
  ORGANISM  Pontibacter burrus
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Pontibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047191.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22503.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Pontibacter burrus"
                     /db_xref="taxon:2704466"
     Protein         1..180
                     /product="DUF6992 family protein"
                     /calculated_mol_wt=20225
ORIGIN      
        1 mkkyfclllc lllatgasaq pdalatfnlq qsgilrigmf vlggwallni ligsfrlmka
       61 trnkrfffqm niywnivnlv iasaalysll ttdianytla qsltqhhwfk kvlylnigld
      121 iaylmmgiwl qersrfspkt eqlkgwgqai vlqglfllvl dvvltamled kaptlhslip
//
LOCUS       WP_235925908             101 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6412 domain-containing protein [Actinokineospora pegani].
ACCESSION   WP_235925908
VERSION     WP_235925908.1
KEYWORDS    RefSeq.
SOURCE      Actinokineospora pegani
  ORGANISM  Actinokineospora pegani
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.
REFERENCE   1  (residues 1 to 101)
  AUTHORS   Kudo,F., Tsunoda,T., Takashima,M. and Eguchi,T.
  TITLE     Five-Membered Cyclitol Phosphate Formation by a myo-Inositol
            Phosphate Synthase Orthologue in the Biosynthesis of the
            Carbocyclic Nucleoside Antibiotic Aristeromycin
  JOURNAL   Chembiochem 17 (22), 2143-2148 (2016)
   PUBMED   27577857
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039759.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19950.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Actinokineospora pegani"
                     /db_xref="taxon:2654637"
     Protein         1..101
                     /product="DUF6412 domain-containing protein"
                     /calculated_mol_wt=10139
ORIGIN      
        1 mdtrmtvaer vrfalavllp alfvalpgap ggallsaaga vaaalvvlal varvvvgiap
       61 agvravslre raksvggvrf rdpdargrsr praptgrfat a
//
LOCUS       WP_235925915             231 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Actinokineospora
            pegani].
ACCESSION   WP_235925915
VERSION     WP_235925915.1
KEYWORDS    RefSeq.
SOURCE      Actinokineospora pegani
  ORGANISM  Actinokineospora pegani
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.
REFERENCE   1  (residues 1 to 231)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 231)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 231)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 231)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Actinokineospora pegani"
                     /db_xref="taxon:2654637"
     Protein         1..231
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=24506
     Region          2..>217
                     /region_name="GsiA"
                     /note="ABC-type glutathione transport system ATPase
                     component, contains duplicated ATPase domain
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1123"
                     /db_xref="CDD:440740"
ORIGIN      
        1 mhidtgrwse tvvegvdltv pkgqvtallg esgggksmla aaltgrlpdt aqatgdvlie
       61 gahvedwrev rgrtvglvpq egasaftaad tvgaqlrgle qrhrrwtver acaaarypld
      121 aldlypdqhs sgqvqraala aallpvpgll iadeptasld tglayevwgt lreyadtgaa
      181 vlaithdvhh vvalgvadrm vvlregrita agtpdeirrl edpyvqgffr t
//
LOCUS       WP_235925917             484 aa            linear   BCT 02-MAR-2025
DEFINITION  neutral zinc metallopeptidase [Actinokineospora pegani].
ACCESSION   WP_235925917
VERSION     WP_235925917.1
KEYWORDS    RefSeq.
SOURCE      Actinokineospora pegani
  ORGANISM  Actinokineospora pegani
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016143.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04228.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Actinokineospora pegani"
                     /db_xref="taxon:2654637"
     Protein         1..484
                     /product="neutral zinc metallopeptidase"
                     /calculated_mol_wt=51051
     Region          46..273
                     /region_name="Zn_peptidase"
                     /note="Putative neutral zinc metallopeptidase; cl19825"
                     /db_xref="CDD:473215"
ORIGIN      
        1 mrvlqwriaa avgvvavvva cagtpvvgva rgvgdidagt vaglpvdnng psgpkqgaed
       61 anltvenadg gemdrlavna lsdiydywti hmradfgeqf epvrrlasyd sdgkaitlcg
      121 tstkglvnaf ycgqddsvaw drgvllpmld kqfgpmsvva vlahemghav qyrlgeksni
      181 sqstptiike qqadcyaggf fryvadkkak hfdintgqgl nhvlatmffi rdpagasatk
      241 qgahglafdr vfafqagfve gpkrcarmda deingrivek erneteikgs ddgdvdlada
      301 evrsllkasl kqafgdtgnh peitydgarc asggstppvs ycadnntvav dtkavqkiat
      361 ppkrgqepgv dgagigdfaa faeiasryal siqntvgapl ngekaglrta cltgawarft
      421 dadggrklrl aigdldeava ellqdnslia advqgkqips gfarveafrv gyfegdkgca
      481 grfs
//
LOCUS       WP_235925985             189 aa            linear   BCT 02-MAR-2025
DEFINITION  PH domain-containing protein [Actinokineospora pegani].
ACCESSION   WP_235925985
VERSION     WP_235925985.1
KEYWORDS    RefSeq.
SOURCE      Actinokineospora pegani
  ORGANISM  Actinokineospora pegani
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.
REFERENCE   1  (residues 1 to 189)
  AUTHORS   Xu,Q., Bateman,A., Finn,R.D., Abdubek,P., Astakhova,T.,
            Axelrod,H.L., Bakolitsa,C., Carlton,D., Chen,C., Chiu,H.J.,
            Chiu,M., Clayton,T., Das,D., Deller,M.C., Duan,L., Ellrott,K.,
            Ernst,D., Farr,C.L., Feuerhelm,J., Grant,J.C., Grzechnik,A.,
            Han,G.W., Jaroszewski,L., Jin,K.K., Klock,H.E., Knuth,M.W.,
            Kozbial,P., Krishna,S.S., Kumar,A., Marciano,D., McMullan,D.,
            Miller,M.D., Morse,A.T., Nigoghossian,E., Nopakun,A., Okach,L.,
            Puckett,C., Reyes,R., Rife,C.L., Sefcovic,N., Tien,H.J.,
            Trame,C.B., van den Bedem,H., Weekes,D., Wooten,T., Hodgson,K.O.,
            Wooley,J., Elsliger,M.A., Deacon,A.M., Godzik,A., Lesley,S.A. and
            Wilson,I.A.
  TITLE     Bacterial pleckstrin homology domains: a prokaryotic origin for the
            PH domain
  JOURNAL   J Mol Biol 396 (1), 31-46 (2010)
   PUBMED   19913036
REFERENCE   2  (residues 1 to 189)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03703.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Actinokineospora pegani"
                     /db_xref="taxon:2654637"
     Protein         1..189
                     /product="PH domain-containing protein"
                     /calculated_mol_wt=21058
     Region          18..>156
                     /region_name="YdbT"
                     /note="Uncharacterized membrane protein YdbT, contains
                     bPH2 (bacterial pleckstrin homology) domain [Function
                     unknown]; COG3428"
                     /db_xref="CDD:442654"
ORIGIN      
        1 mgypddllss getvllhkhs hwkmlllpyf allvilgggv wlavlaqdld waniawiaig
       61 avglalvvwl flvpfvrwrt thfivttdrv miregvvkrn gvdiplsris svrfehgivd
      121 rivgcgtlvi esssqeplef ddvpqvervh stiykqindn pyddyddqpa gagdtaqlpa
      181 hdprdrrgh
//
LOCUS       WP_235926050             390 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding oxidoreductase [Actinokineospora pegani].
ACCESSION   WP_235926050
VERSION     WP_235926050.1
KEYWORDS    RefSeq.
SOURCE      Actinokineospora pegani
  ORGANISM  Actinokineospora pegani
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.
REFERENCE   1  (residues 1 to 390)
  AUTHORS   Lu,G., Campbell,W.H., Schneider,G. and Lindqvist,Y.
  TITLE     Crystal structure of the FAD-containing fragment of corn nitrate
            reductase at 2.5 A resolution: relationship to other flavoprotein
            reductases
  JOURNAL   Structure 2 (9), 809-821 (1994)
   PUBMED   7812715
REFERENCE   2  (residues 1 to 390)
  AUTHORS   Hyde,G.E., Crawford,N.M. and Campbell,W.H.
  TITLE     The sequence of squash NADH:nitrate reductase and its relationship
            to the sequences of other flavoprotein oxidoreductases. A family of
            flavoprotein pyridine nucleotide cytochrome reductases
  JOURNAL   J Biol Chem 266 (35), 23542-23547 (1991)
   PUBMED   1748631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013161.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00970.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Actinokineospora pegani"
                     /db_xref="taxon:2654637"
     Protein         1..390
                     /product="FAD-binding oxidoreductase"
                     /calculated_mol_wt=43227
     Region          25..154
                     /region_name="Hmp"
                     /note="Hemoglobin-like flavoprotein [Energy production and
                     conversion]; COG1017"
                     /db_xref="CDD:440640"
     Region          165..387
                     /region_name="O2ase_reductase_like"
                     /note="The oxygenase reductase FAD/NADH binding domain
                     acts as part of the multi-component bacterial oxygenases
                     which oxidize hydrocarbons using oxygen as the oxidant.
                     Electron transfer is from NADH via FAD (in the oxygenase
                     reductase) and an [2FE-2S]...; cd06187"
                     /db_xref="CDD:99784"
     Site            order(193,206..209,223..225,227,231..233,272,275,385,387)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99784"
     Site            order(206,208..209)
                     /site_type="other"
                     /note="FAD binding motif [chemical binding]"
                     /db_xref="CDD:99784"
     Site            order(230,233,236,243,251,253)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99784"
     Site            order(267,271..274,276)
                     /site_type="other"
                     /note="beta-alpha-beta structure motif"
                     /db_xref="CDD:99784"
     Site            order(272..273,298..300,360..361)
                     /site_type="other"
                     /note="NAD binding pocket [chemical binding]"
                     /db_xref="CDD:99784"
ORIGIN      
        1 msadvspfps snpraeapaa vaamvrlvre sfafveprad evaaafydnl fhvepstqdm
       61 fppdmrvrds rllqalvqvv qmvdrpedlv pylreigreh rkfglvsdhy eavgmaliha
      121 vrefaepvwt edverawaea ytimaramlg aaaeatgpaw wnatvverer iswdlavlrv
      181 cpdqplpyrp gqyvsvevpq hprlwrylsp atapaddgvl efhvrtveng lvsptivndt
      241 qvgdewriaa pmgrltvdrq sdrdvlmitg gtgiapmrsi ieelaqwgln prvhlftggr
      301 vredlydlah lqniaasnpw lsilpvlehe pdvaeaehgt laqvvtkygs wsdcdilvsg
      361 spqmirstvs alllagapid hitydpfils
//
LOCUS       WP_235926080             305 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA recombination protein RmuC [Actinokineospora pegani].
ACCESSION   WP_235926080
VERSION     WP_235926080.1
KEYWORDS    RefSeq.
SOURCE      Actinokineospora pegani
  ORGANISM  Actinokineospora pegani
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.
REFERENCE   1  (residues 1 to 305)
  AUTHORS   Slupska,M.M., Chiang,J.H., Luther,W.M., Stewart,J.L., Amii,L.,
            Conrad,A. and Miller,J.H.
  TITLE     Genes involved in the determination of the rate of inversions at
            short inverted repeats
  JOURNAL   Genes Cells 5 (6), 425-437 (2000)
   PUBMED   10886369
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014680.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02646.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Actinokineospora pegani"
                     /db_xref="taxon:2654637"
     gene            1..305
                     /gene="rmuC"
     Protein         1..305
                     /product="DNA recombination protein RmuC"
                     /calculated_mol_wt=32632
     Region          <68..>208
                     /region_name="RmuC"
                     /note="RmuC family; cl46524"
                     /db_xref="CDD:480864"
ORIGIN      
        1 mtavfgtlaa vlalllagav alfwrlynds drraaafrae vaaerarsda hqsalrryev
       61 afasisgrge lgeqvlveta ralgmreglh ftvqtdvagg gaarpdllll vgdgrkvpvd
      121 akmsmatwve avetddaeer ldalrvhvrn irsraadlag kgyqrwadai ygtimfvpsd
      181 aavvaaldad pellrwlmdr rvflcgptgf aviaaaalfa atertlaedv aavrsqsaaa
      241 hraaagavda vnlssthlqr fisarrreld aleqfraavt plteasgtpt alseirrvee
      301 ptytd
//
LOCUS       WP_235926105             352 aa            linear   BCT 02-MAR-2025
DEFINITION  pyridoxal-phosphate dependent enzyme [Actinokineospora pegani].
ACCESSION   WP_235926105
VERSION     WP_235926105.1
KEYWORDS    RefSeq.
SOURCE      Actinokineospora pegani
  ORGANISM  Actinokineospora pegani
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012512.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00291.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Actinokineospora pegani"
                     /db_xref="taxon:2654637"
     Protein         1..352
                     /product="pyridoxal-phosphate dependent enzyme"
                     /calculated_mol_wt=37685
     Region          39..298
                     /region_name="Trp-synth-beta_II"
                     /note="Tryptophan synthase beta superfamily (fold type
                     II); this family of pyridoxal phosphate (PLP)-dependent
                     enzymes catalyzes beta-replacement and beta-elimination
                     reactions. This CD corresponds to
                     aminocyclopropane-1-carboxylate deaminase (ACCD),
                     tryptophan...; cl00342"
                     /db_xref="CDD:444852"
     Site            order(39,69,176..180,266,291..292)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:107204"
     Site            39
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:107204"
ORIGIN      
        1 mtvqaptavv hehitdaikt pslirlspnt vlvrfetlkv yaalgavrhl ldagiirkgq
       61 tlvdsssgiy alalamacnr yglnchivas ttvdatmraq levlgvtvdq mppsedlrld
      121 qrgrvarvre llaahpdmhw mrqyhdpvhy lgyselagll raalpagplt vvgsvgtgas
      181 tgglaqalrr adpatrlvgv qpfgsitfgs drftdpdaii agigsaipfg nvrhdlydrv
      241 hwmnfehara aavgllreha vfaglstgaa hlaarweggr dparthvvig adtghryvak
      301 vfaahrdald paglapveig sldelappws tmdwqrrgha hpdlipaqer as
//
LOCUS       WP_235926136             271 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Actinokineospora
            pegani].
ACCESSION   WP_235926136
VERSION     WP_235926136.1
KEYWORDS    RefSeq.
SOURCE      Actinokineospora pegani
  ORGANISM  Actinokineospora pegani
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.
REFERENCE   1  (residues 1 to 271)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 271)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 271)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 271)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Actinokineospora pegani"
                     /db_xref="taxon:2654637"
     Protein         1..271
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=28577
     Region          3..198
                     /region_name="CcmA"
                     /note="ABC-type multidrug transport system, ATPase
                     component [Defense mechanisms]; COG1131"
                     /db_xref="CDD:440746"
ORIGIN      
        1 mgkrygsgra ilrevdldlv pggvlavsga igsgkstllk iiagvsrpss grvldrprqv
       61 gyvperfpsd erltarsylt hmgrlrgmst raaaergval ldrlalaggv dthlrklskg
      121 nlqkvavaqs lmvppallal depwsgldrg ahgvlgqlid evaeaggavv ftdhresvva
      181 ltadrvchlr qgrvvvtgag paqwvavtrv vlrppalagp aladpslhev ldvreedgav
      241 varvdaersd afllaalrrg wsvvrveevg r
//
LOCUS       WP_235925940             130 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6010 family protein [Actinokineospora pegani].
ACCESSION   WP_235925940
VERSION     WP_235925940.1
KEYWORDS    RefSeq.
SOURCE      Actinokineospora pegani
  ORGANISM  Actinokineospora pegani
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.
REFERENCE   1  (residues 1 to 130)
  AUTHORS   He,M., Haltli,B., Summers,M., Feng,X. and Hucul,J.
  TITLE     Isolation and characterization of meridamycin biosynthetic gene
            cluster from Streptomyces sp. NRRL 30748
  JOURNAL   Gene 377, 109-118 (2006)
   PUBMED   16806745
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039957.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19473.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Actinokineospora pegani"
                     /db_xref="taxon:2654637"
     Protein         1..130
                     /product="DUF6010 family protein"
                     /calculated_mol_wt=13461
     Region          5..124
                     /region_name="DUF6010"
                     /note="Family of unknown function (DUF6010); pfam19473"
                     /db_xref="CDD:466102"
ORIGIN      
        1 meavmgvvgp vligvvfvvg csfipepgrq rfsavmvaga gavyisgggm gwwelaftaa
       61 vtgcaylglg dyrwlgvgwl lhtcwdvvhh vkgapiiphv adsslgcaic dpvialwllr
      121 gaptlgrkge
//
LOCUS       WP_235926231             242 aa            linear   BCT 02-MAR-2025
DEFINITION  type II secretion system F family protein [Actinokineospora
            pegani].
ACCESSION   WP_235926231
VERSION     WP_235926231.1
KEYWORDS    RefSeq.
SOURCE      Actinokineospora pegani
  ORGANISM  Actinokineospora pegani
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.
REFERENCE   1  (residues 1 to 242)
  AUTHORS   Desvaux,M., Hebraud,M., Talon,R. and Henderson,I.R.
  TITLE     Secretion and subcellular localizations of bacterial proteins: a
            semantic awareness issue
  JOURNAL   Trends Microbiol 17 (4), 139-145 (2009)
   PUBMED   19299134
REFERENCE   2  (residues 1 to 242)
  AUTHORS   Desvaux,M., Parham,N.J., Scott-Tucker,A. and Henderson,I.R.
  TITLE     The general secretory pathway: a general misnomer?
  JOURNAL   Trends Microbiol 12 (7), 306-309 (2004)
   PUBMED   15223057
REFERENCE   3  (residues 1 to 242)
  AUTHORS   Peabody,C.R., Chung,Y.J., Yen,M.R., Vidal-Ingigliardi,D.,
            Pugsley,A.P. and Saier,M.H.
  TITLE     Type II protein secretion and its relationship to bacterial type IV
            pili and archaeal flagella
  JOURNAL   Microbiology (Reading) 149 (Pt 11), 3051-3072 (2003)
   PUBMED   14600218
REFERENCE   4  (residues 1 to 242)
  AUTHORS   Py,B., Loiseau,L. and Barras,F.
  TITLE     An inner membrane platform in the type II secretion machinery of
            Gram-negative bacteria
  JOURNAL   EMBO Rep 2 (3), 244-248 (2001)
   PUBMED   11266368
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012694.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00482.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Actinokineospora pegani"
                     /db_xref="taxon:2654637"
     Protein         1..242
                     /product="type II secretion system F family protein"
                     /calculated_mol_wt=24854
     Region          39..239
                     /region_name="TadC"
                     /note="Flp pilus assembly protein TadC [Extracellular
                     structures]; COG2064"
                     /db_xref="CDD:441667"
ORIGIN      
        1 maanslppqs lalgkshgrl ahdlalvnrq psdhharkla laaagvfgpg aaatalfalg
       61 lplgigaplv aaaalgvagf vlpdillran aarlrnefrq tlaayldlvw iavaggagid
      121 saltgaatng hgwaaeqirr aldtarltra spwsalrdlg drldigdlae laasvslagc
      181 egarirasla artramrtrq tteaeqraqa atermslpva ilflgflali gypainqvlt
      241 gl
//
LOCUS       WP_235926309             225 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Brucella
            anthropi].
ACCESSION   WP_235926309
VERSION     WP_235926309.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 225)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..225
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=24585
     Region          21..218
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(35..36,38..39,42,46,48..54,146..151,157..158,
                     160..161)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176102"
ORIGIN      
        1 mdteraladv remrgpqrgl vrvaayegfa vdrlariiad fraqfpgvlf hvwvgnssei
       61 cervnegnad igitysysap agvkieriar rpmyaliprs hplarrkqvt ladlstepma
      121 mpdkgrtqrq lidtalatkg lamdpvfstn smatlkvfaf aaetimfsss agskdntlpe
      181 nivaipvvde tmkasvlqiv tmqgrnlprs iaafldflgq svier
//
LOCUS       WP_235926329             154 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme [Brucella anthropi].
ACCESSION   WP_235926329
VERSION     WP_235926329.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 154)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..154
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /calculated_mol_wt=16946
     Region          <23..122
                     /region_name="TPP_enzymes"
                     /note="Thiamine pyrophosphate (TPP) enzyme family,
                     TPP-binding module; found in many key metabolic enzymes
                     which use TPP (also known as thiamine diphosphate) as a
                     cofactor. These enzymes include, among others, the E1
                     components of the pyruvate, the acetoin and...; cd00568"
                     /db_xref="CDD:238318"
     Site            order(25..28,53,55)
                     /site_type="other"
                     /note="TPP-binding site [chemical binding]"
                     /db_xref="CDD:238318"
ORIGIN      
        1 mtasrkpips itkdvgyslr srlfgdgsfg mtvgeletlv rlqvpailil fnnatfgwik
       61 slhrlkghnq cfgvdflapk gqaiaeaygl kawtaktade vdialaeafv wkdgpcfvdi
      121 hvesiadrvp pvyswllkrg edplnlkpve rsyv
//
LOCUS       WP_235926366             313 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Actinokineospora
            pegani].
ACCESSION   WP_235926366
VERSION     WP_235926366.1
KEYWORDS    RefSeq.
SOURCE      Actinokineospora pegani
  ORGANISM  Actinokineospora pegani
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.
REFERENCE   1  (residues 1 to 313)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 313)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 313)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Actinokineospora pegani"
                     /db_xref="taxon:2654637"
     Protein         1..313
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=32569
     Region          42..299
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(125..126,129,156)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238347"
ORIGIN      
        1 mvaaaalala acgqvednsa paapgaeprt vetmfgpvev patptkvval gwsdaetala
       61 lgvqpiaasd wlafggegvg pwaagrytta prilptleld yaaisnlgpd lilntrsdns
      121 eekfkelski aptvsapkdv vaygtswrqq telvaqalgk vdegdkliae vdaafaaakd
      181 pafegksvav gahysdkysa ylrgdsrvdf meslgfenkp evqalangsf sadlsreqie
      241 llsadltvlf pigsdgtalr edailnqips akaghllild dlnitnafss gsplgteyai
      301 ektvpmfkta lgg
//
LOCUS       WP_235926396             355 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MucB/RseB C-terminal domain-containing protein
            [Variovorax].
ACCESSION   WP_235926396
VERSION     WP_235926396.1
KEYWORDS    RefSeq.
SOURCE      Variovorax
  ORGANISM  Variovorax
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae.
REFERENCE   1  (residues 1 to 355)
  AUTHORS   Kim,D.Y., Jin,K.S., Kwon,E., Ree,M. and Kim,K.K.
  TITLE     Crystal structure of RseB and a model of its binding mode to RseA
  JOURNAL   Proc Natl Acad Sci U S A 104 (21), 8779-8784 (2007)
   PUBMED   17496148
REFERENCE   2  (residues 1 to 355)
  AUTHORS   Martinez-Salazar,J.M., Moreno,S., Najera,R., Boucher,J.C.,
            Espin,G., Soberon-Chavez,G. and Deretic,V.
  TITLE     Characterization of the genes coding for the putative sigma factor
            AlgU and its regulators MucA, MucB, MucC, and MucD in Azotobacter
            vinelandii and evaluation of their roles in alginate biosynthesis
  JOURNAL   J Bacteriol 178 (7), 1800-1808 (1996)
   PUBMED   8606151
REFERENCE   3  (residues 1 to 355)
  AUTHORS   Martin,D.W., Schurr,M.J., Mudd,M.H. and Deretic,V.
  TITLE     Differentiation of Pseudomonas aeruginosa into the
            alginate-producing form: inactivation of mucB causes conversion to
            mucoidy
  JOURNAL   Mol Microbiol 9 (3), 497-506 (1993)
   PUBMED   8412698
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17188.9
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Variovorax"
                     /db_xref="taxon:34072"
     Protein         1..355
                     /product="MucB/RseB C-terminal domain-containing protein"
                     /calculated_mol_wt=39097
     Region          6..354
                     /region_name="RseB"
                     /note="negative regulator of sigma E activity [Signal
                     transduction mechanisms]; COG3026"
                     /db_xref="CDD:442262"
ORIGIN      
        1 mpisartlvl afavlclgqm ataqtrygaa ntksvpsaqt deppamgvte wlqrmhagar
       61 qrsyvgtfvv sapggdlssa riwhvrdgdh qleriealsg pprstfrrnr nvmtflpeak
      121 vvkvekrenl dlfpnlpdkp dssvgdyydv raigkdrvag fdadvvqlvp rdglrfgyri
      181 wserrsglvv klqtvdsdtr vveqsafsel qldapvkaqa laqmmantsg yriekleler
      241 staqdegwml rtpvagfkpr sffrrpalpa gdgkppkpea ttvqwtfsdg latvslfier
      301 ydptrtpgdg vltigatnai rrrlpapasd wwltavgevp qqtlnafaqs lartr
//
LOCUS       WP_235926402             400 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase 87 family protein [Actinokineospora pegani].
ACCESSION   WP_235926402
VERSION     WP_235926402.1
KEYWORDS    RefSeq.
SOURCE      Actinokineospora pegani
  ORGANISM  Actinokineospora pegani
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.
REFERENCE   1  (residues 1 to 400)
  AUTHORS   Birch,H.L., Alderwick,L.J., Bhatt,A., Rittmann,D., Krumbach,K.,
            Singh,A., Bai,Y., Lowary,T.L., Eggeling,L. and Besra,G.S.
  TITLE     Biosynthesis of mycobacterial arabinogalactan: identification of a
            novel alpha(1-->3) arabinofuranosyltransferase
  JOURNAL   Mol Microbiol 69 (5), 1191-1206 (2008)
   PUBMED   18627460
REFERENCE   2  (residues 1 to 400)
  AUTHORS   Morita,Y.S., Sena,C.B., Waller,R.F., Kurokawa,K., Sernee,M.F.,
            Nakatani,F., Haites,R.E., Billman-Jacobe,H., McConville,M.J.,
            Maeda,Y. and Kinoshita,T.
  TITLE     PimE is a polyprenol-phosphate-mannose-dependent
            mannosyltransferase that transfers the fifth mannose of
            phosphatidylinositol mannoside in mycobacteria
  JOURNAL   J Biol Chem 281 (35), 25143-25155 (2006)
   PUBMED   16803893
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021134.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09594.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Actinokineospora pegani"
                     /db_xref="taxon:2654637"
     Protein         1..400
                     /product="glycosyltransferase 87 family protein"
                     /GO_function="GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=43084
     Region          42..339
                     /region_name="PMT_2"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; cl21590"
                     /db_xref="CDD:473917"
ORIGIN      
        1 mtervgaevv ggvarwwpla vlpgvclvag vvgwvlgwhl gvdnavyrsg avallrgepl
       61 ydamslraep ewarlpftyp ptaallfvpl alvptqvawg ilgavtlgal avavsvavra
      121 lpdrpqwmde rvvlvglgiv lvglepvwrt lflgqinlvl lvlvmvdvlv lgtrgsrfgg
      181 vlvgiaaavk ltplvfvghl lllrrwadaa ravgtflvlq llmlglvphd vaafwgravq
      241 dpqrigpiyw agnqslnglv lrltdnadws mrvvvpiaiv lavpcalwvr klaargeplp
      301 allvtaffgl lispvswshh wvwavplvvf llsrvrgrrd vwpvaavvav fascvllvmr
      361 nglavefewt ppeyvigsay llvpvvagai vlvkrsrsrl
//
LOCUS       WP_235926495              84 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1090 family protein [Variovorax boronicumulans].
ACCESSION   WP_235926495
VERSION     WP_235926495.1
KEYWORDS    RefSeq.
SOURCE      Variovorax boronicumulans
  ORGANISM  Variovorax boronicumulans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Variovorax.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018214.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06476.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Variovorax boronicumulans"
                     /db_xref="taxon:436515"
     Protein         1..84
                     /product="DUF1090 family protein"
                     /calculated_mol_wt=9542
ORIGIN      
        1 mnaeeckaqe avlerdmala rsrgqmlrrr eladtlsalq lrcqalapvs revriekleh
       61 eirtlrtele raeaqlrsvk sesp
//
LOCUS       WP_235926567             180 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing protein [Actinokineospora pegani].
ACCESSION   WP_235926567
VERSION     WP_235926567.1
KEYWORDS    RefSeq.
SOURCE      Actinokineospora pegani
  ORGANISM  Actinokineospora pegani
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.
REFERENCE   1  (residues 1 to 180)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01966.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Actinokineospora pegani"
                     /db_xref="taxon:2654637"
     Protein         1..180
                     /product="HD domain-containing protein"
                     /calculated_mol_wt=19929
     Region          20..>91
                     /region_name="HD"
                     /note="HD domain; pfam01966"
                     /db_xref="CDD:460398"
ORIGIN      
        1 mldqarelvr aelaesqprr fshlqgacrr aeaaaplfsa edgrllvvta lvhdvgycds
       61 aretgfhpld garflaergy parlcdlvah hscarleadl rglgselsqw tderselrda
      121 lwwadmttsp dgevvtfker vaeiqarygp edlvsrfira agpelrgave rtetrlaglr
//
LOCUS       WP_235926572             334 aa            linear   BCT 02-MAR-2025
DEFINITION  PilW family protein [Variovorax boronicumulans].
ACCESSION   WP_235926572
VERSION     WP_235926572.1
KEYWORDS    RefSeq.
SOURCE      Variovorax boronicumulans
  ORGANISM  Variovorax boronicumulans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Variovorax.
REFERENCE   1  (residues 1 to 334)
  AUTHORS   Carbonnelle,E., Helaine,S., Prouvensier,L., Nassif,X. and
            Pelicic,V.
  TITLE     Type IV pilus biogenesis in Neisseria meningitidis: PilW is
            involved in a step occurring after pilus assembly, essential for
            fibre stability and function
  JOURNAL   Mol Microbiol 55 (1), 54-64 (2005)
   PUBMED   15612916
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027400.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16074.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Variovorax boronicumulans"
                     /db_xref="taxon:436515"
     Protein         1..334
                     /product="PilW family protein"
                     /GO_process="GO:0043683 - type IV pilus assembly [Evidence
                     IEA]"
                     /calculated_mol_wt=35368
     Region          16..>136
                     /region_name="PilW"
                     /note="Type IV pilus assembly protein PilW [Cell motility,
                     Extracellular structures]; COG4966"
                     /db_xref="CDD:443992"
     Region          185..329
                     /region_name="PilW"
                     /note="Type IV Pilus-assembly protein W; pfam16074"
                     /db_xref="CDD:435119"
ORIGIN      
        1 msavfavppr rrnpvrgftl ielmisltig lvilaaalst fstssrssql sqaetqlned
       61 gilalnliqq qlkqagysqq lipsngatvm gnyagpavrg ctggftdaaa afdklsctgk
      121 gsdaiairye attdntmptg tdaklatncl gnginaltps qvsppptppp gapppanyal
      181 adnrylvtda stapmlscrg mekrdavnai gpsqpllanv esmrilygva srpsielaat
      241 ydplrhqivk yldaagvdal pgsgvladla edrwsrvlsv rvclqmrsdr pvrdvpdggl
      301 sykrcdntdr tgtdgylrrt ftttvllrnr litp
//
LOCUS       WP_235926677             131 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: VOC family protein [Variovorax].
ACCESSION   WP_235926677
VERSION     WP_235926677.1
KEYWORDS    RefSeq.
SOURCE      Variovorax
  ORGANISM  Variovorax
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae.
REFERENCE   1  (residues 1 to 131)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 131)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Variovorax"
                     /db_xref="taxon:34072"
     Protein         1..131
                     /product="VOC family protein"
                     /calculated_mol_wt=14061
     Region          4..130
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mriridhial wttdlerckr fyvdyfgata gagyvnpakg fascflslgd garieamtts
       61 tlspvvaeag aqrmgwthla isvgsdaevd altqrlkadg yplldgprrt gdgyyesvvl
      121 dpdgnrieit s
//
LOCUS       WP_235926714             442 aa            linear   BCT 02-MAR-2025
DEFINITION  adenylosuccinate synthetase [Variovorax boronicumulans].
ACCESSION   WP_235926714
VERSION     WP_235926714.1
KEYWORDS    RefSeq.
SOURCE      Variovorax boronicumulans
  ORGANISM  Variovorax boronicumulans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Variovorax.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012912.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00709.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Variovorax boronicumulans"
                     /db_xref="taxon:436515"
     Protein         1..442
                     /product="adenylosuccinate synthetase"
                     /EC_number="6.3.4.4"
                     /GO_function="GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /GO_function="GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /calculated_mol_wt=46780
     Region          9..434
                     /region_name="Adenylsucc_synt"
                     /note="Adenylosuccinate synthetase; pfam00709"
                     /db_xref="CDD:459912"
ORIGIN      
        1 mtstryvsll glgfgdcgkg rftdflsgaw gahtvvrfng gaqaghnvvl adgrhhtfsq
       61 fgagsfhagv atvlaspvvv hptalrveae vlqragvpda farlfidarc rvttpfhqaa
      121 grlrewarga aahgscgvgv getvrqalaa pettlhygdl ahpartlgkl ealrlalhre
      181 fadalpssae aaqelsvlad aslaqrwlda vqpclrqspp asadaigerl aragtvlfeg
      241 aqgvlldewr gfhphttwst vstaaveavl rdagiaapvq hlgvlrshlt rhgagplpth
      301 draldarlae phnaddgwqg afrrghpdav llryalaavg pldgllashl davahadlrw
      361 ctgyrsadgh tlsslplgda tdldhqhalt rllegaqply esqpvasape wvrrvealsg
      421 lpvrfgafgp vreavrardl ll
//
LOCUS       WP_235926279             313 aa            linear   BCT 02-MAR-2025
DEFINITION  Leg1-related protein [Actinokineospora pegani].
ACCESSION   WP_235926279
VERSION     WP_235926279.1
KEYWORDS    RefSeq.
SOURCE      Actinokineospora pegani
  ORGANISM  Actinokineospora pegani
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.
REFERENCE   1  (residues 1 to 313)
  AUTHORS   Chang,C., Hu,M., Zhu,Z., Lo,L.J., Chen,J. and Peng,J.
  TITLE     liver-enriched gene 1a and 1b encode novel secretory proteins
            essential for normal liver development in zebrafish
  JOURNAL   PLoS One 6 (8), e22910 (2011)
   PUBMED   21857963
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017428.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05612.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Actinokineospora pegani"
                     /db_xref="taxon:2654637"
     Protein         1..313
                     /product="Leg1-related protein"
                     /note="Bacterial members of this family occur in the
                     Actinobacteria, and are related to Leg1 (liver-enriched
                     gene 1) of zebrafish.; Bacterial members of this family
                     occur in the Actinobacteria, and are related to Leg1
                     (liver-enriched gene 1) of zebrafish.; Bacterial members
                     of this family occur in the Actinobacteria, and are
                     related to Leg1 (liver-enriched gene 1) of zebrafish.;
                     Bacterial members of this family occur in the
                     Actinobacteria, and are related to Leg1 (liver-enriched
                     gene 1) of zebrafish."
                     /calculated_mol_wt=35247
     Region          27..295
                     /region_name="Leg1"
                     /note="pfam05612"
                     /db_xref="CDD:428543"
ORIGIN      
        1 mahpeelatl dlhsvwttad eltaafdpfr feqrmaayrl mientnqaeg fgadnrhnpl
       61 wglmfqhqwq frtgrlgldt vrdgridpds pwgygnytls vvpwlgavaa gvvpdlpvad
      121 pprrsrfryv tggvvpeelv agvadwrayf alvsgsgsad peparlalwk ahktcldvvv
      181 dalaevdttp wpeqevtflr gwcrmvdylw aaawptdfaf mtahgldvlp etllttpedv
      241 ralpdkargn vgnvirlatt pkwrydlnlf lwkrimrtre araqvlplld avfnprpena
      301 aqrrkligyl lrp
//
LOCUS       WP_235926963             321 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Variovorax
            boronicumulans].
ACCESSION   WP_235926963
VERSION     WP_235926963.1
KEYWORDS    RefSeq.
SOURCE      Variovorax boronicumulans
  ORGANISM  Variovorax boronicumulans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Variovorax.
REFERENCE   1  (residues 1 to 321)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 321)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 321)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 321)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Variovorax boronicumulans"
                     /db_xref="taxon:436515"
     Protein         1..321
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=34858
     Region          20..318
                     /region_name="PRK13537"
                     /note="nodulation factor ABC transporter ATP-binding
                     protein NodI"
                     /db_xref="CDD:237420"
ORIGIN      
        1 mpshttpssp ssssssplfq vrglrkryge ttvvddlsfe iapgeclgvi gpngagkttt
       61 irmclgltap dggsidalgl qmprdalaik aqlgvvsqfd tldpdfscae nlvvygryfg
      121 fskahvrarv pqllefaals hkadakpgel sggmrrrlsl aralvndpkl llldepttgl
      181 dpqarhlmwe rlqvllqqgk silltthfmd eaerlcsrll vldhgrkiae grprdliaeh
      241 lepdvvevyg ngalslagsa elqalaarve vsgetvffyt qdarrlldal tqhgglrtfh
      301 rpanledlfl kltgrqirqd g
//
LOCUS       WP_235926971             547 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Variovorax boronicumulans].
ACCESSION   WP_235926971
VERSION     WP_235926971.1
KEYWORDS    RefSeq.
SOURCE      Variovorax boronicumulans
  ORGANISM  Variovorax boronicumulans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Variovorax.
REFERENCE   1  (residues 1 to 547)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Variovorax boronicumulans"
                     /db_xref="taxon:436515"
     Protein         1..547
                     /product="AMP-binding protein"
                     /calculated_mol_wt=58658
     Region          16..538
                     /region_name="PRK06178"
                     /note="acyl-CoA synthetase; Validated"
                     /db_xref="CDD:235724"
ORIGIN      
        1 mettpatpvr lkelpprvqq plhaylrdha rargdatacl wygqalswae ldrasdafaa
       61 rlqalgvakg epvvlflnnc pqylvahfgi qkigaivcps gplnkehela yqvndlkarv
      121 ivaaaplvpv vrkvqaesal ahvfvvhyad llpaeptldl paelaaerta ertvpegced
      181 flavmrsgat pqpvaidmdd ialmtytsgt tglpkgamls ygnalfktra aadcngvgpd
      241 dvllsiaply hiagmlmgvn vpvlsgaasv lmhrfdprav lqaiaaykvs wwysiapmnv
      301 acmqvpdiag fdlsslkmnp vtsfgiafte plaaqwrsha nhcssfeaay glsethtcdt
      361 ytphvaprwg tqgvpvpgvt iriidtetqa dmptgevgei vltsagsfkg ywnkpeataa
      421 tlrngwvhtg dmgkldadgy ltfigrfkem ikvsgysvfp eevetilikh pavaqaavia
      481 qpdpekgevv kafivrkpga aleadalvaw arenmasyka pravsfidal pttgagkvlr
      541 rllkdkt
//
LOCUS       WP_235926972             444 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Variovorax
            boronicumulans].
ACCESSION   WP_235926972
VERSION     WP_235926972.1
KEYWORDS    RefSeq.
SOURCE      Variovorax boronicumulans
  ORGANISM  Variovorax boronicumulans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Variovorax.
REFERENCE   1  (residues 1 to 444)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 444)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Variovorax boronicumulans"
                     /db_xref="taxon:436515"
     Protein         1..444
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=46548
     Region          232..426
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(239,279,315,421,424)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(239,421,424)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(239,279,315)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
ORIGIN      
        1 mklparwrvr lrdaafspah wmavlglavl lvgvqavwae kveqaarqpa earwvaswav
       61 avldfaelda npataaiggp gdhvfrgqtl rqmmrptidg erirvrvsnr fgktplriaa
      121 atvalgtggd aispaslrtl rfggratvtv apgaeawsdg valnvaagqa vavslfldra
      181 tpfatmylls tdtgwlangn vvasprlpkp aalpmshivt gldvlttrpv rtvvafgdsi
      241 tagggesgdg sypdmlatrl rdspqaahav svinagiggn rllvngigpd glsrfardal
      301 gqsgvthviv llgtndigra ifagipglkv pphdvptaer vteglgqlvk qarakgvkvl
      361 lgtvppfgnt iygtdaneam reavnrwvrs rqdvdgvvdf davlrdpaap rqlnptfdsg
      421 dhlhpnragh aamaaaidlr elqe
//
LOCUS       WP_235927030             184 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Gloeocapsopsis dulcis].
ACCESSION   WP_235927030
VERSION     WP_235927030.1
KEYWORDS    RefSeq.
SOURCE      Gloeocapsopsis dulcis
  ORGANISM  Gloeocapsopsis dulcis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Oscillatoriophycideae; Chroococcales; Chroococcaceae;
            Gloeocapsopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Gloeocapsopsis dulcis"
                     /db_xref="taxon:2859516"
     Protein         1..184
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=20096
     Region          <15..180
                     /region_name="PotD"
                     /note="Spermidine/putrescine-binding periplasmic protein
                     [Amino acid transport and metabolism]; COG0687"
                     /db_xref="CDD:440451"
ORIGIN      
        1 mnhrmkrrtf lgasfmagia mtglgscnqs fqaveellpn lasvaanpga lsalfqqgev
       61 diaphnlssi avlqdkgvdv ewvipregsd afgasmhvvk nptssvelat ayidtalste
      121 vqtamaqapy yiapvnrnap lqgvlaekia tnfdeyekfi yqdwetisqq rsqwierfnr
      181 evtv
//
LOCUS       WP_235926755             599 aa            linear   BCT 02-MAR-2025
DEFINITION  D-alanyl-D-alanine carboxypeptidase family protein
            [Actinokineospora pegani].
ACCESSION   WP_235926755
VERSION     WP_235926755.1
KEYWORDS    RefSeq.
SOURCE      Actinokineospora pegani
  ORGANISM  Actinokineospora pegani
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.
REFERENCE   1  (residues 1 to 599)
  AUTHORS   Lee,W., McDonough,M.A., Kotra,L., Li,Z.H., Silvaggi,N.R.,
            Takeda,Y., Kelly,J.A. and Mobashery,S.
  TITLE     A 1.2-A snapshot of the final step of bacterial cell wall
            biosynthesis
  JOURNAL   Proc Natl Acad Sci U S A 98 (4), 1427-1431 (2001)
   PUBMED   11171967
REFERENCE   2  (residues 1 to 599)
  AUTHORS   Evers,S. and Courvalin,P.
  TITLE     Regulation of VanB-type vancomycin resistance gene expression by
            the VanS(B)-VanR (B) two-component regulatory system in
            Enterococcus faecalis V583
  JOURNAL   J Bacteriol 178 (5), 1302-1309 (1996)
   PUBMED   8631706
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014600.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02557.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Actinokineospora pegani"
                     /db_xref="taxon:2654637"
     Protein         1..599
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /GO_function="GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=61529
     Region          68..>259
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          214..428
                     /region_name="NlpC"
                     /note="Cell wall-associated hydrolase, NlpC_P60 family
                     [Cell wall/membrane/envelope biogenesis]; COG0791"
                     /db_xref="CDD:440554"
     Region          475..598
                     /region_name="LdcB"
                     /note="LD-carboxypeptidase LdcB, LAS superfamily [Cell
                     wall/membrane/envelope biogenesis]; COG1876"
                     /db_xref="CDD:441480"
ORIGIN      
        1 mggqakqege qvrdrfrvla avvlavgvvl adgpvraqet qppqieagvg pdggaadsrp
       61 geafadpqva alqrtatdvq reladlgerv rgaerdlvva aervsgakse rqsadavvaa
      121 qqdevdaysk alysalaqps eiqmlltaan pndflqgndl iarvradqdg rlnaavrrqd
      181 aalaaereal taekaaadrk tdldrrnada snraaavsse lrgqvddtna avvaqqkaqk
      241 erneqtaanw kaytdrlaas gvtpppaaal rdptrlppgm tavlgstgpq pgvaqvlppg
      301 aepllvlpae tvtavttavg algkpyvpgt ggqgptaysc dglvkaayds gglpvpgavg
      361 eqmavlapva aadaqpgdlv flgparygvq gvglvldert mlaadarlag vvvadmpggd
      421 tllgvgrpsl eqrpaqpvpq atdgglkwrc gsvrvparga geaagawggy pnglippsal
      481 ctigaashml rcdaaeayqa lsaayassfg gpvcitdsyr afsaqvrlyq vkpalaavpg
      541 tsnhgwglav dlcggiqsfg saqhawmkan apafgwsnpa waqpgrgree pwhweyvgg
//
LOCUS       WP_235927141              91 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Gloeocapsopsis dulcis].
ACCESSION   WP_235927141
VERSION     WP_235927141.1
KEYWORDS    RefSeq.
SOURCE      Gloeocapsopsis dulcis
  ORGANISM  Gloeocapsopsis dulcis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Oscillatoriophycideae; Chroococcales; Chroococcaceae;
            Gloeocapsopsis.
REFERENCE   1  (residues 1 to 91)
  AUTHORS   Tavladoraki,P., Schinina,M.E., Cecconi,F., Di Agostino,S.,
            Manera,F., Rea,G., Mariottini,P., Federico,R. and Angelini,R.
  TITLE     Maize polyamine oxidase: primary structure from protein and cDNA
            sequencing
  JOURNAL   FEBS Lett 426 (1), 62-66 (1998)
   PUBMED   9598979
REFERENCE   2  (residues 1 to 91)
  AUTHORS   Tsugeno,Y. and Ito,A.
  TITLE     A key amino acid responsible for substrate selectivity of monoamine
            oxidase A and B
  JOURNAL   J Biol Chem 272 (22), 14033-14036 (1997)
   PUBMED   9162023
REFERENCE   3  (residues 1 to 91)
  AUTHORS   Schilling,B. and Lerch,K.
  TITLE     Cloning, sequencing and heterologous expression of the monoamine
            oxidase gene from Aspergillus niger
  JOURNAL   Mol Gen Genet 247 (4), 430-438 (1995)
   PUBMED   7770050
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Gloeocapsopsis dulcis"
                     /db_xref="taxon:2859516"
     Protein         1..91
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=10107
     Region          6..>56
                     /region_name="YobN"
                     /note="Monoamine oxidase [Amino acid transport and
                     metabolism]; COG1231"
                     /db_xref="CDD:440844"
ORIGIN      
        1 mglasvyear qrlgghiqsv tgavgeglis dlgghfintd hadmlelane fhlrlfivmk
       61 mhknfpflkq vtismvefal krklqirlvc v
//
LOCUS       WP_235927048             142 aa            linear   BCT 02-MAR-2025
DEFINITION  CpcT/CpeT family chromophore lyase [Gloeocapsopsis dulcis].
ACCESSION   WP_235927048
VERSION     WP_235927048.1
KEYWORDS    RefSeq.
SOURCE      Gloeocapsopsis dulcis
  ORGANISM  Gloeocapsopsis dulcis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Oscillatoriophycideae; Chroococcales; Chroococcaceae;
            Gloeocapsopsis.
REFERENCE   1  (residues 1 to 142)
  AUTHORS   Shen,G., Saunee,N.A., Williams,S.R., Gallo,E.F., Schluchter,W.M.
            and Bryant,D.A.
  TITLE     Identification and characterization of a new class of bilin lyase:
            the cpcT gene encodes a bilin lyase responsible for attachment of
            phycocyanobilin to Cys-153 on the beta-subunit of phycocyanin in
            Synechococcus sp. PCC 7002
  JOURNAL   J Biol Chem 281 (26), 17768-17778 (2006)
   PUBMED   16644722
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017966.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06206.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Gloeocapsopsis dulcis"
                     /db_xref="taxon:2859516"
     Protein         1..142
                     /product="CpcT/CpeT family chromophore lyase"
                     /GO_function="GO:0016829 - lyase activity [Evidence IEA]"
                     /GO_process="GO:0017009 - protein-phycocyanobilin linkage
                     [Evidence IEA]"
                     /calculated_mol_wt=15127
     Region          51..>142
                     /region_name="CpeT"
                     /note="CpeT/CpcT family (DUF1001); cl05623"
                     /db_xref="CDD:471278"
ORIGIN      
        1 mcsrvrslsv savvskkris ilvsiavltc vsavnaapan nlsspaqqvq evvshldgam
       61 dtsaqalanp napnvrittc kvtvkdaalt rphavfmyqe qalsqrlsqp yrqrflriap
      121 svdnnsvesa vfrpptakaw ig
//
LOCUS       WP_235927262             622 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Parafannyhessea
            umbonata].
ACCESSION   WP_235927262
VERSION     WP_235927262.1
KEYWORDS    RefSeq.
SOURCE      Parafannyhessea umbonata
  ORGANISM  Parafannyhessea umbonata
            Bacteria; Bacillati; Actinomycetota; Coriobacteriia;
            Coriobacteriales; Atopobiaceae; Parafannyhessea.
REFERENCE   1  (residues 1 to 622)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 622)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Parafannyhessea umbonata"
                     /db_xref="taxon:604330"
     Protein         1..622
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=68039
     Region          188..365
                     /region_name="TesA"
                     /note="Lysophospholipase L1 or related esterase. Includes
                     spore coat protein LipC/YcsK [Cell cycle control, cell
                     division, chromosome partitioning, Lipid transport and
                     metabolism]; COG2755"
                     /db_xref="CDD:442045"
     Region          525..606
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
ORIGIN      
        1 mrlsdmtrge vpgfalvrvd aadllhgavr hepelegwir pwrfsadqmr amgscqawhp
       61 glyrqmgrat agvclefttd ssevavevrl dgepvgtrev lryvdargea rmhdglscev
      121 dgrplgvrvp atgdaqvtft lddpsaapae gimqlpgmgd thhvrvwlpc lrgctlrsvv
      181 gngsfvepvk krrdllvlgd siaqgfvvdd palawptlla aelgldvvnq gvggqvfqpg
      241 tlyglaptid pavivvalga nyryepcrer lvtrdvrsyl eqvarlwedv ptwvatplwh
      301 dedawpshrm scfevvprli reqasrfggm rvvdgaglld hdaalmadgf ehpgpagsrq
      361 varrlglvme qastpqqelr arakallaka prrtfplaec lrrgigtvic arpgcvalre
      421 pggmqmvwat dpelardvac almrdsvtlc lepsladdlg rwlglpakep vhlaiyrkka
      481 rprpdaahpv rplgeadlsa vrqrmthpey qtdaqtlell ragdvlgafa gdelvgfvge
      541 qtegsmgmle vfedfrrhgw alalesakic qvldrgqtpw cevwpdnvas vrlqrrlglt
      601 vlpateacfl aqsrgsepqd ar
//
LOCUS       WP_235927364             216 aa            linear   BCT 02-MAR-2025
DEFINITION  type II secretion system F family protein [Parafannyhessea
            umbonata].
ACCESSION   WP_235927364
VERSION     WP_235927364.1
KEYWORDS    RefSeq.
SOURCE      Parafannyhessea umbonata
  ORGANISM  Parafannyhessea umbonata
            Bacteria; Bacillati; Actinomycetota; Coriobacteriia;
            Coriobacteriales; Atopobiaceae; Parafannyhessea.
REFERENCE   1  (residues 1 to 216)
  AUTHORS   Peabody,C.R., Chung,Y.J., Yen,M.R., Vidal-Ingigliardi,D.,
            Pugsley,A.P. and Saier,M.H.
  TITLE     Type II protein secretion and its relationship to bacterial type IV
            pili and archaeal flagella
  JOURNAL   Microbiology (Reading) 149 (Pt 11), 3051-3072 (2003)
   PUBMED   14600218
REFERENCE   2  (residues 1 to 216)
  AUTHORS   Py,B., Loiseau,L. and Barras,F.
  TITLE     An inner membrane platform in the type II secretion machinery of
            Gram-negative bacteria
  JOURNAL   EMBO Rep 2 (3), 244-248 (2001)
   PUBMED   11266368
REFERENCE   3  (residues 1 to 216)
  AUTHORS   Stathopoulos,C., Hendrixson,D.R., Thanassi,D.G., Hultgren,S.J., St
            Geme,J.W. 3rd and Curtiss,R. 3rd.
  TITLE     Secretion of virulence determinants by the general secretory
            pathway in gram-negative pathogens: an evolving story
  JOURNAL   Microbes Infect 2 (9), 1061-1072 (2000)
   PUBMED   10967286
REFERENCE   4  (residues 1 to 216)
  AUTHORS   Salmond,G.P. and Reeves,P.J.
  TITLE     Membrane traffic wardens and protein secretion in gram-negative
            bacteria
  JOURNAL   Trends Biochem Sci 18 (1), 7-12 (1993)
   PUBMED   8438237
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11449670
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Parafannyhessea umbonata"
                     /db_xref="taxon:604330"
     Protein         1..216
                     /product="type II secretion system F family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /calculated_mol_wt=22885
     Region          <68..209
                     /region_name="TadC"
                     /note="Flp pilus assembly protein TadC [Extracellular
                     structures]; COG2064"
                     /db_xref="CDD:441667"
ORIGIN      
        1 mdlayvggcl sastaafama fgllgrrpsr eldgtgglge rieliasrma slpafrelnr
       61 rgresaarra clrslptfld vvtlglssgl sfdaalslyc eryeddlssa fgeallswqi
      121 gaesrssald rlaeeldvga lrsfsstvsq alefgsplas alesqaqair eeqrsqleee
      181 iekvpvkmli plgtlivpam llsilgplig sslatt
//
LOCUS       WP_235927070              45 aa            linear   BCT 02-MAR-2025
DEFINITION  carbohydrate porin [Gloeocapsopsis dulcis].
ACCESSION   WP_235927070
VERSION     WP_235927070.1
KEYWORDS    RefSeq.
SOURCE      Gloeocapsopsis dulcis
  ORGANISM  Gloeocapsopsis dulcis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Oscillatoriophycideae; Chroococcales; Chroococcaceae;
            Gloeocapsopsis.
REFERENCE   1  (residues 1 to 45)
  AUTHORS   Wylie,J.L. and Worobec,E.A.
  TITLE     The OprB porin plays a central role in carbohydrate uptake in
            Pseudomonas aeruginosa
  JOURNAL   J Bacteriol 177 (11), 3021-3026 (1995)
   PUBMED   7768797
REFERENCE   2  (residues 1 to 45)
  AUTHORS   Wylie,J.L., Bernegger-Egli,C., O'Neil,J.D. and Worobec,E.A.
  TITLE     Biophysical characterization of OprB, a glucose-inducible porin of
            Pseudomonas aeruginosa
  JOURNAL   J Bioenerg Biomembr 25 (5), 547-556 (1993)
   PUBMED   8132494
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016830.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04966.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..45
                     /organism="Gloeocapsopsis dulcis"
                     /db_xref="taxon:2859516"
     Protein         1..45
                     /product="carbohydrate porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /GO_process="GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /calculated_mol_wt=4966
     Region          <1..45
                     /region_name="por_somb"
                     /note="iron uptake porin; NF033921"
                     /db_xref="CDD:468246"
ORIGIN      
        1 meglyrlqln qniaitpgvl vifnpehnna ndtiyvgtlr ttfsf
//
LOCUS       WP_235927450            1056 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1553 domain-containing protein [Aquirufa ecclesiirivi].
ACCESSION   WP_235927450
VERSION     WP_235927450.1
KEYWORDS    RefSeq.
SOURCE      Aquirufa ecclesiirivi
  ORGANISM  Aquirufa ecclesiirivi
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Flectobacillaceae; Aquirufa.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019223.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07587.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Aquirufa ecclesiirivi"
                     /db_xref="taxon:2715124"
     Protein         1..1056
                     /product="DUF1553 domain-containing protein"
                     /calculated_mol_wt=119157
     Region          40..102
                     /region_name="PSCyt1"
                     /note="Planctomycete cytochrome C; pfam07635"
                     /db_xref="CDD:429568"
     Region          150..356
                     /region_name="PSCyt2"
                     /note="Protein of unknown function (DUF1549); pfam07583"
                     /db_xref="CDD:429550"
     Region          474..641
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          749..1001
                     /region_name="PSD1"
                     /note="Protein of unknown function (DUF1553); pfam07587"
                     /db_xref="CDD:429553"
ORIGIN      
        1 maakppkslp lpadvtleyr qlpaaldfni hikpilsdkc fachgpdkak qkaglrldlp
       61 enayaklpes pgkvaitpgn lqkselahri lskdpsyvmp epkshlslsa kekaillkwi
      121 qdgavykphw afvkpvkqai pesqkgmnvi dywvqtklek eslkmsakas kalllrrlsf
      181 dltglapsip elenyladnt pnayekqvdr llasphfgek mavdwldlar yadshgytvd
      241 rirdmspyrd wvikafnnnm pydtfihqql agdlmpkpsk emliatgfnr nhpqnteggi
      301 veeefqaeyv idrtntfgea fmaistgcar chdhkydpis qknyyelfsf fnnvreagqi
      361 sysddlptpt lmlptkekee vlkfiqtkir tveekmnqsp tsnapfqnwi kskgheklad
      421 emipqqglva yfdldatlkn klndkqvavi kresgktgdq pvfvkgkqgq glafdgdvya
      481 dlspagvfrk sepftigmwv nipkdmkegv ifhksnaerl ynfkgfhvyl knnrleinma
      541 htapsnaink vmktdvprdq wihlaltydg ssqaagfnlf vdgqksdmet vidqlykdii
      601 yfsknelglq iggwwrglgf kggkadevav ynrelipyei qvlaqraswk dvvyksqdqw
      661 tnhqgeafra yfkqnldstq lafakeikhw rtaladssek ieevmimqem pqpkkafllq
      721 rgqydakgqe vfpntpqkil pfptnlpknr lglaqwltqe nnpltarvav nrfwqnffgt
      781 givktsedfg nqgempshpe lldalaiqfr esgwnikqmm kqmvmsetyq qdskatveqr
      841 endpenrlla rgpsvrlsae mirdnalqas gllvqkvggk svypyqpdgl weinsshykq
      901 dttsavyrrs lyvvvkrsvp nptlatfdap srssclvrrq ktntplqalv glndptflea
      961 akmlgeqmav eidvnkaiqm tfkkltsrea sdkelallvd lqrkslarfq qdaskakgwl
     1021 qagmkrlqgn mdgnlvaana vvasaimnsd asitkr
//
LOCUS       WP_235927463             200 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Aquirufa ecclesiirivi].
ACCESSION   WP_235927463
VERSION     WP_235927463.1
KEYWORDS    RefSeq.
SOURCE      Aquirufa ecclesiirivi
  ORGANISM  Aquirufa ecclesiirivi
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Flectobacillaceae; Aquirufa.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Aquirufa ecclesiirivi"
                     /db_xref="taxon:2715124"
     Protein         1..200
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=22756
     Region          61..196
                     /region_name="NUDIX_ADPRase_Ndx2"
                     /note="NUDIX family Ndx2; cd24161"
                     /db_xref="CDD:467609"
ORIGIN      
        1 mgkiyaqryi nsfyfygmke qdkpwitlsk ntvyenpwir iehhevinpn qnegiyglvh
       61 fkntavsifp ldeegntylv gqhrytlday swelpeggcl iqdqesplea akrelkeetg
      121 lqaqewislg tcylsnsvtd ekahmflakn lqqgiaapee teslvvrkip iqevfnmaen
      181 geiqdalsll tilkvkslis
//
LOCUS       WP_235927487             545 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5060 domain-containing protein [Aquirufa ecclesiirivi].
ACCESSION   WP_235927487
VERSION     WP_235927487.1
KEYWORDS    RefSeq.
SOURCE      Aquirufa ecclesiirivi
  ORGANISM  Aquirufa ecclesiirivi
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Flectobacillaceae; Aquirufa.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027900.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16586.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Aquirufa ecclesiirivi"
                     /db_xref="taxon:2715124"
     Protein         1..545
                     /product="DUF5060 domain-containing protein"
                     /calculated_mol_wt=63350
     Region          34..101
                     /region_name="DUF5060"
                     /note="Domain of unknown function (DUF5060); pfam16586"
                     /db_xref="CDD:435443"
     Region          <212..399
                     /region_name="DUF4038"
                     /note="Protein of unknown function (DUF4038); pfam13204"
                     /db_xref="CDD:463808"
     Region          449..542
                     /region_name="DUF5605"
                     /note="Domain of unknown function (DUF5605); pfam18310"
                     /db_xref="CDD:465703"
ORIGIN      
        1 mqrhiymnpl rylksyllci sflfslsfgl aqeqlerwnr veltyqtafk gngfqdvefk
       61 aifvhqdttl tvsgfydgnn rfklrfmstr lgswkyttis nvpgldkktg tfecvtpsaq
      121 nhgpvktkgl hfsysddkny yplgttayaw nhmgaelqql tlnslqksgf nkirmcvfpk
      181 nydlvkeepn lypfvlqetk rdaqgnevkv wdytqfnpaf fqqlekqida lqnmgieadl
      241 ilfhpydkgr wgfdampkev niryiqylla rissfrnvww smanewdyvk sktiadwdel
      301 tktvvkadpy rhlcsihgat atyydywkpe fthvsvqdes pvqspnsaam lrnvyhkpiv
      361 ldevgyegnl tsrwgryspe tmthliwngv iggtyvthge sfmfkdhrdt ifwakggrfi
      421 geswkrvgfl rqileegpgp mslsdvsrdn vtssggkghy lvyfgkqiqd ywifnlpinn
      481 gafgkltagt rfkvdiidty gmtirtlpei fetgkerdyr ffdkdykkir lpekpylavr
      541 ireiq
//
LOCUS       WP_235927570             329 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3034 family protein [Sandarakinorhabdus rubra].
ACCESSION   WP_235927570
VERSION     WP_235927570.1
KEYWORDS    RefSeq.
SOURCE      Sandarakinorhabdus rubra
  ORGANISM  Sandarakinorhabdus rubra
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandarakinorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11231.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Sandarakinorhabdus rubra"
                     /db_xref="taxon:2672568"
     Protein         1..329
                     /product="DUF3034 family protein"
                     /calculated_mol_wt=34157
     Region          65..326
                     /region_name="DUF3034"
                     /note="Protein of unknown function (DUF3034); pfam11231"
                     /db_xref="CDD:431746"
ORIGIN      
        1 mgikraawaa avclygttal antsgdgvvd vgedalmeqv egsgsappar sgpsfldpgg
       61 rllltggvst iegagggglv pwaliggygt knefgitsyv tgvdtqdftl asygaalnvk
      121 nrlelsvarq nfnlreigna lalgnrytis qtiigaklrl igdavleqds llpqiaigaq
      181 ykinddatvv ggalglqrrg tdfyiaatki flaqsllvnv tgrltkanqf gilgfgglgg
      241 qnqaykpqfe asaalllsrk laiggefrtk snrlegalgg tsfreenawd afvayapirn
      301 vsvtlayarl gqialarqtg ayaslqigf
//
LOCUS       WP_235927636             462 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein, partial [Sandarakinorhabdus
            rubra].
ACCESSION   WP_235927636
VERSION     WP_235927636.1
KEYWORDS    RefSeq.
SOURCE      Sandarakinorhabdus rubra
  ORGANISM  Sandarakinorhabdus rubra
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandarakinorhabdus.
REFERENCE   1  (residues 1 to 462)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 462)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02770.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Sandarakinorhabdus rubra"
                     /db_xref="taxon:2672568"
     Protein         <1..462
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
     Region          102..459
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(186,216,218,249,251,443..445,447,449)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 rvaaakaras eaagiaaala hqlhgaigvt aehrlplftr alwqrrdmag sehrhhatlg
       61 aavlargslw alateeplse aeaapatgrf rfpavpetaa raalrrevrg flapaltglp
      121 phlrahswng hsadfsrslg argwlgmtwp kalggqerta ldrlvvieel laagapvaah
      181 wiadrqtgpl llrygtpeqq aaylpaiarg elyacigmse pgagsdlaal ttrarpvdgg
      241 wringaklwt tyahkahvml llcrtgegqr heglsqllvp mdtpgisvrp iidlmgehhf
      301 nevhfddvfv padalvgaeg qgwaqvmsel ayersgperf lstlvlaeel vavlgpdapq
      361 aahapigrla ahlivlrqma rgmaalleag edpaleaaiv kdlgatfeqa ipevaralmp
      421 adppadllat ldstihiapm vslrggtrei lrgiiarglg vr
//
LOCUS       WP_235927652             386 aa            linear   BCT 02-MAR-2025
DEFINITION  Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal
            domain [Sandarakinorhabdus rubra].
ACCESSION   WP_235927652
VERSION     WP_235927652.1
KEYWORDS    RefSeq.
SOURCE      Sandarakinorhabdus rubra
  ORGANISM  Sandarakinorhabdus rubra
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandarakinorhabdus.
REFERENCE   1  (residues 1 to 386)
  AUTHORS   Baumer,S., Ide,T., Jacobi,C., Johann,A., Gottschalk,G. and
            Deppenmeier,U.
  TITLE     The F420H2 dehydrogenase from Methanosarcina mazei is a
            Redox-driven proton pump closely related to NADH dehydrogenases
  JOURNAL   J Biol Chem 275 (24), 17968-17973 (2000)
   PUBMED   10751389
REFERENCE   2  (residues 1 to 386)
  AUTHORS   Alex,L.A., Reeve,J.N., Orme-Johnson,W.H. and Walsh,C.T.
  TITLE     Cloning, sequence determination, and expression of the genes
            encoding the subunits of the nickel-containing
            8-hydroxy-5-deazaflavin reducing hydrogenase from Methanobacterium
            thermoautotrophicum delta H
  JOURNAL   Biochemistry 29 (31), 7237-7244 (1990)
   PUBMED   2207102
REFERENCE   3  (residues 1 to 386)
  AUTHORS   Shuber,A.P., Orr,E.C., Recny,M.A., Schendel,P.F., May,H.D.,
            Schauer,N.L. and Ferry,J.G.
  TITLE     Cloning, expression, and nucleotide sequence of the formate
            dehydrogenase genes from Methanobacterium formicicum
  JOURNAL   J Biol Chem 261 (28), 12942-12947 (1986)
   PUBMED   3531194
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016328.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04432.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Sandarakinorhabdus rubra"
                     /db_xref="taxon:2672568"
     Protein         1..386
                     /product="Coenzyme F420 hydrogenase/dehydrogenase, beta
                     subunit C-terminal domain"
                     /calculated_mol_wt=42870
     Region          52..316
                     /region_name="FrhB"
                     /note="Coenzyme F420-reducing hydrogenase, beta subunit
                     [Energy production and conversion]; COG1035"
                     /db_xref="CDD:440658"
ORIGIN      
        1 msrtstptdc gtacqfikpd yaameaqvhg rardesrpde lffgpfqrma karlkqpsag
       61 aqwtgitsrl gerlletgav dailtmapdp sdkwrprpvm virpeamaqv rgmrmgyapl
      121 lalleparaa gfkrigiigi pcqihalrrl eaklgferly vigtpcsdnt ttenfhefls
      181 llsdqpetit ylefkadyhv elrfddgkrk dipflmlpls dlrpdffplt crtcvdytns
      241 laditvgymg gtgeqwllvr ndrgaellgl lgdevalaep ddngkpdgsk ragpvkgfla
      301 nteraagglp lrrmpkfirp lvgklmplvg pkgkefartr vemkaietil hlrreapamm
      361 knmipphvwt lvaryglkpa pgerrd
//
LOCUS       WP_235927660              93 aa            linear   BCT 02-MAR-2025
DEFINITION  His/Gly/Thr/Pro-type tRNA ligase C-terminal domain-containing
            protein, partial [Sandarakinorhabdus rubra].
ACCESSION   WP_235927660
VERSION     WP_235927660.1
KEYWORDS    RefSeq.
SOURCE      Sandarakinorhabdus rubra
  ORGANISM  Sandarakinorhabdus rubra
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandarakinorhabdus.
REFERENCE   1  (residues 1 to 93)
  AUTHORS   Wolf,Y.I., Aravind,L., Grishin,N.V. and Koonin,E.V.
  TITLE     Evolution of aminoacyl-tRNA synthetases--analysis of unique domain
            architectures and phylogenetic trees reveals a complex history of
            horizontal gene transfer events
  JOURNAL   Genome Res 9 (8), 689-710 (1999)
   PUBMED   10447505
REFERENCE   2  (residues 1 to 93)
  AUTHORS   Aberg,A., Yaremchuk,A., Tukalo,M., Rasmussen,B. and Cusack,S.
  TITLE     Crystal structure analysis of the activation of histidine by
            Thermus thermophilus histidyl-tRNA synthetase
  JOURNAL   Biochemistry 36 (11), 3084-3094 (1997)
   PUBMED   9115984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015113.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03129.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Sandarakinorhabdus rubra"
                     /db_xref="taxon:2672568"
     Protein         <1..93
                     /product="His/Gly/Thr/Pro-type tRNA ligase C-terminal
                     domain-containing protein"
     Region          <23..80
                     /region_name="HisS"
                     /note="Histidyl-tRNA synthetase [Translation, ribosomal
                     structure and biogenesis]; COG0124"
                     /db_xref="CDD:439894"
ORIGIN      
        1 vavavvavge gseaaalall tglrragiaa eqgwrgnlkk kmeragksga rfaaligsde
       61 laagtvtlrd lasgaqdsvp aaaavtalas rla
//
LOCUS       WP_235927668             146 aa            linear   BCT 02-MAR-2025
DEFINITION  glutamate--tRNA ligase family protein, partial [Sandarakinorhabdus
            rubra].
ACCESSION   WP_235927668
VERSION     WP_235927668.1
KEYWORDS    RefSeq.
SOURCE      Sandarakinorhabdus rubra
  ORGANISM  Sandarakinorhabdus rubra
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandarakinorhabdus.
REFERENCE   1  (residues 1 to 146)
  AUTHORS   Rath,V.L., Silvian,L.F., Beijer,B., Sproat,B.S. and Steitz,T.A.
  TITLE     How glutaminyl-tRNA synthetase selects glutamine
  JOURNAL   Structure 6 (4), 439-449 (1998)
   PUBMED   9562563
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012951.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00749.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Sandarakinorhabdus rubra"
                     /db_xref="taxon:2672568"
     Protein         <1..146
                     /product="glutamate--tRNA ligase family protein"
                     /GO_function="GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
     Region          <1..128
                     /region_name="nt_trans"
                     /note="nucleotidyl transferase superfamily; cl00015"
                     /db_xref="CDD:469580"
ORIGIN      
        1 hlsaderarr lasetpawrl dvaaalartg plawhdssag wqqaapqddi vvarrdvgta
       61 yalavvvdda aqgvtdvvrg mdlfaathpq rllqallglp tpryhhhrli lgadgrrlak
      121 rdagetlrhl rkngtkaaei lhevln
//
LOCUS       WP_235927701             150 aa            linear   BCT 02-MAR-2025
DEFINITION  site-specific integrase, partial [Sandarakinorhabdus rubra].
ACCESSION   WP_235927701
VERSION     WP_235927701.1
KEYWORDS    RefSeq.
SOURCE      Sandarakinorhabdus rubra
  ORGANISM  Sandarakinorhabdus rubra
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandarakinorhabdus.
REFERENCE   1  (residues 1 to 150)
  AUTHORS   Subramanya,H.S., Arciszewska,L.K., Baker,R.A., Bird,L.E.,
            Sherratt,D.J. and Wigley,D.B.
  TITLE     Crystal structure of the site-specific recombinase, XerD
  JOURNAL   EMBO J 16 (17), 5178-5187 (1997)
   PUBMED   9311978
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014898.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02899.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Sandarakinorhabdus rubra"
                     /db_xref="taxon:2672568"
     Protein         1..>150
                     /product="site-specific integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          1..>150
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
ORIGIN      
        1 masligrfla hlgdqrrlsp htlraygltl erfedflirh lggpvvggql galavadlrg
       61 flalrrgegl aaaslardvs alktflawar rheglpcdai aalkapkqpr rlpravspad
      121 vrelvavved aarqpwvaar daavllllyg
//
LOCUS       WP_235927716             428 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Sandarakinorhabdus rubra].
ACCESSION   WP_235927716
VERSION     WP_235927716.1
KEYWORDS    RefSeq.
SOURCE      Sandarakinorhabdus rubra
  ORGANISM  Sandarakinorhabdus rubra
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandarakinorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Sandarakinorhabdus rubra"
                     /db_xref="taxon:2672568"
     Protein         1..428
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=43327
     Region          2..398
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(9..10,13..14,17,49,111,113,115..117,120,139,
                     142..143,146,244,247..248,251..253,256,288,292,340..341,
                     345,349,365,368..369,372..373,376)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mvfaalltva agntalqtvl paiarvihlp dmlvavifsl sallwtisap ywarqsdirg
       61 rrrlmllgsl gfmvsmagcg iaiyaglngw lapiatfllf aslrslfgif gsaanpaaqa
      121 yvagrtsead rtaalsslss afglgtiigp avaplfilap fglsgpmfaf aaiaalvmia
      181 varvlpdddp thatgrpqsg sgapssepsl agattgasvk aaaagrpkrl sikdsrilpf
      241 mifgfvsgsi qaatgqaigf lvidtlggda lasqqsiali fmagafstll aqwvlipqlr
      301 ltppalmrwg tllaavgtag ialsvslyal vlafalmsmg yglarpgfta gaslavsrae
      361 qggvagavts vngscfiaap aigiglyqig psvtywlgaa alvalavyaf tqpalgrepg
      421 ehgdeseg
//
LOCUS       WP_235927751             238 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin-binding protein, partial [Sandarakinorhabdus rubra].
ACCESSION   WP_235927751
VERSION     WP_235927751.1
KEYWORDS    RefSeq.
SOURCE      Sandarakinorhabdus rubra
  ORGANISM  Sandarakinorhabdus rubra
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandarakinorhabdus.
REFERENCE   1  (residues 1 to 238)
  AUTHORS   Sola,M., Kneussel,M., Heck,I.S., Betz,H. and Weissenhorn,W.
  TITLE     X-ray crystal structure of the trimeric N-terminal domain of
            gephyrin
  JOURNAL   J Biol Chem 276 (27), 25294-25301 (2001)
   PUBMED   11325967
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013183.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00994.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Sandarakinorhabdus rubra"
                     /db_xref="taxon:2672568"
     Protein         <1..238
                     /product="molybdopterin-binding protein"
     Region          <1..197
                     /region_name="MoeA"
                     /note="Molybdopterin Mo-transferase (molybdopterin
                     biosynthesis) [Coenzyme transport and metabolism];
                     COG0303"
                     /db_xref="CDD:440072"
ORIGIN      
        1 aaghgalpvv rrprvtliat gdelvppget pgpgqivssn pamlapllrw agaevsdpgl
       61 ipdradalaa almasdadli ltiggasvgd hdlvvpvlrq lgadidfwki alrpgkplla
      121 gslhgrrvig lpgnpvsafv tallfavplv arlagrhhel pterlplasp lpangprrdh
      181 lrgrriegra eafarqdsal lsllasaell iireagapaa aagdlvdcia ldmfhsvf
//
LOCUS       WP_235927770             161 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Sandarakinorhabdus rubra].
ACCESSION   WP_235927770
VERSION     WP_235927770.1
KEYWORDS    RefSeq.
SOURCE      Sandarakinorhabdus rubra
  ORGANISM  Sandarakinorhabdus rubra
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandarakinorhabdus.
REFERENCE   1  (residues 1 to 161)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 161)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Sandarakinorhabdus rubra"
                     /db_xref="taxon:2672568"
     Protein         1..161
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=17502
     Region          15..139
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
     Site            order(78..80,90..91)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
ORIGIN      
        1 mvnpvfsilp aedrhleamm avmdagfepr ygeawsavql aatlampgcw gtlamlgtqv
       61 agfslcrqag pevellliav mpdlrrqgva arllravqae avargasevf levrednraa
      121 rrlyeaaqfa avgrrpdyyf gkdgsrraai tmrfalsqlq d
//
LOCUS       WP_235927781             287 aa            linear   BCT 02-MAR-2025
DEFINITION  heme-binding protein, partial [Sandarakinorhabdus rubra].
ACCESSION   WP_235927781
VERSION     WP_235927781.1
KEYWORDS    RefSeq.
SOURCE      Sandarakinorhabdus rubra
  ORGANISM  Sandarakinorhabdus rubra
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandarakinorhabdus.
REFERENCE   1  (residues 1 to 287)
  AUTHORS   Ortiz de Orue Lucana,D., Bogel,G., Zou,P. and Groves,M.R.
  TITLE     The oligomeric assembly of the novel haem-degrading protein HbpS is
            essential for interaction with its cognate two-component sensor
            kinase
  JOURNAL   J Mol Biol 386 (4), 1108-1122 (2009)
   PUBMED   19244623
REFERENCE   2  (residues 1 to 287)
  AUTHORS   Pellicer,M.T., Badia,J., Aguilar,J. and Baldoma,L.
  TITLE     glc locus of Escherichia coli: characterization of genes encoding
            the subunits of glycolate oxidase and the glc regulator protein
  JOURNAL   J Bacteriol 178 (7), 2051-2059 (1996)
   PUBMED   8606183
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015862.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03928.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Sandarakinorhabdus rubra"
                     /db_xref="taxon:2672568"
     Protein         <1..>287
                     /product="heme-binding protein"
     Region          31..>74
                     /region_name="HbpS-like"
                     /note="Haem degrading protein HbpS-like; pfam03928"
                     /db_xref="CDD:461095"
ORIGIN      
        1 ptpaagggst ptptppatpa svypavpsaa lttadveqvi araaaeasar glpaviavvd
       61 rvgnvlavyr magaratatt rpnanganid aqgvtlpael aaiakaitga ylssggnafs
      121 trtasmivqp hfppsantvg lesgplygvq fsqlpcsdlv trfgvgspli gpkrsplgla
      181 adpggfplyk gdvlvggvgv madgdygfda evtdvdadde ehialaatlg npaptairad
      241 risldgtllr ytdavpaglk assasvppls gmagalvavp gfagasi
//
LOCUS       WP_235927955             875 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Goekera deserti].
ACCESSION   WP_235927955
VERSION     WP_235927955.1
KEYWORDS    RefSeq.
SOURCE      Goekera deserti
  ORGANISM  Goekera deserti
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Geodermatophilales; Geodermatophilaceae; Goekera.
REFERENCE   1  (residues 1 to 875)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Goekera deserti"
                     /db_xref="taxon:2497753"
     Protein         1..875
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=90476
     Region          61..326
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     Region          348..865
                     /region_name="PRK09274"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:236443"
ORIGIN      
        1 mtatpappas pappttpaag spglraaalr rdlpgdlpgl dpawsrlvev tdrdgrsnaw
       61 hvldsggept tgtllcvhgn ptwsylwrrl vaaappgwrv vapdqlgmgf sdrlgaprtl
      121 aqrvadlgdl tdalgvtgpv vtvahdwggv islgwgldhr dqlrgvvltn tavaqppddl
      181 gpalirlahs rvwrtpvcvr tptfvraata lswpplpgav rdayaapyag adrraavgdf
      241 vadipftpeh pswpelvrvn egiraldvpa lllwgpndpv faerylaelr rrlpqarlhr
      301 fsgashllpe dapqyadavv rfvagldtpa agqaaapqpd pgrrlwsala eragdddaav
      361 vevagrtvsw sllarrveei grglavaglr agdrvallvp psvdltaavy avwraggviv
      421 vadqglglag mrralrsasv qhvigsaegl aaarlmmlpg trfsagplgp aarralgvry
      481 slvelarlgr qartlgdqah rrpvdaecav lftsgatgpa kgvvytqrqa laqmelvrrt
      541 yaltpedrlv aafapfalfg pglgigcatp aidvtkpgtl taaalgdaaa aiaatvvfas
      601 paalrrvtat ageatgahra algrvrllms agapvpasll raagalmpaa eahtpygmte
      661 clpvtdvsla eveaagtgdg vcvgrplpgv dvrlsavspd gtadgpltda pgvtgeicvr
      721 aahvkdhyda lwvteqqssr dagwhrtgdv ghldeggrlw vqgrlphvvt taagvltpvg
      781 veqrverldg vtaaavvgvg pvgtqavvvv vvpvraprgl gvadpdlaaa vraaagteva
      841 avlaaprlpv dirhaskvdr arvardatal lagsr
//
LOCUS       WP_235927963              67 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Goekera deserti].
ACCESSION   WP_235927963
VERSION     WP_235927963.1
KEYWORDS    RefSeq.
SOURCE      Goekera deserti
  ORGANISM  Goekera deserti
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Geodermatophilales; Geodermatophilaceae; Goekera.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Goekera deserti"
                     /db_xref="taxon:2497753"
     Protein         1..67
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=6616
     Region          <1..66
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mnavapglvr tgihaaagdp drldrvagrv pmgrpgepge iapaitwllg peasyctgav
       61 lrvaggl
//
LOCUS       WP_235928040             398 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Goekera deserti].
ACCESSION   WP_235928040
VERSION     WP_235928040.1
KEYWORDS    RefSeq.
SOURCE      Goekera deserti
  ORGANISM  Goekera deserti
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Geodermatophilales; Geodermatophilaceae; Goekera.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Goekera deserti"
                     /db_xref="taxon:2497753"
     Protein         1..398
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=38351
     Region          29..373
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(33..34,37..38,41,73,123..124,126..128,131,151,
                     154..155,158,224,227..228,231..233,236,259,263,317..318,
                     322,326,342,345..346,349..350,353)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mapppehppa vqvqgplwrl pgmqalvgvg lvafgsfslt iaslpahava egagvqlagv
       61 vttvmlvatv asqtgvpalv rrlgtgrvla agllalglpa plytldagvg wlsavsavrg
      121 fgfavltvla ftlaaglvqp arrgeaigvf gvsvalpnla avpagaaltl gghfpwvawl
      181 aampvlgvll vpavaraatv tppgqrqggv gtaaraaaap slllllvtvt ggglitflpi
      241 erpdgatatl allvlglgaa ltrwrvgala dragsrvllp aavlvsaagi alvagglvld
      301 rggdvvvvlg aavfgagnga lqnltllaaf arageggtta asavwnasfd sgtaigavgv
      361 gvlagavglp vayvllavvl savvpvavaa arsgpgpg
//
LOCUS       WP_235928061             165 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5994 family protein [Goekera deserti].
ACCESSION   WP_235928061
VERSION     WP_235928061.1
KEYWORDS    RefSeq.
SOURCE      Goekera deserti
  ORGANISM  Goekera deserti
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Geodermatophilales; Geodermatophilaceae; Goekera.
REFERENCE   1  (residues 1 to 165)
  AUTHORS   Ogasawara,Y. and Liu,H.W.
  TITLE     Biosynthetic studies of aziridine formation in azicemicins
  JOURNAL   J Am Chem Soc 131 (50), 18066-18068 (2009)
   PUBMED   19928906
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039955.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19457.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Goekera deserti"
                     /db_xref="taxon:2497753"
     Protein         1..165
                     /product="DUF5994 family protein"
                     /calculated_mol_wt=17515
     Region          22..131
                     /region_name="DUF5994"
                     /note="Family of unknown function (DUF5994); pfam19457"
                     /db_xref="CDD:466094"
ORIGIN      
        1 mpvdlgrgsw taqefregid vrvsvradag tgaaldgaww prtrdlavev peliaaldrr
       61 gieverftya mdawtpaprk vvvrgrtvrt ggfsamdpqv vcltvnggsr rldlvvvppe
      121 adaltgaral ristrpgprs pllvlaaagc ppvpqvarlq avras
//
LOCUS       WP_235928062             169 aa            linear   BCT 02-MAR-2025
DEFINITION  MauE/DoxX family redox-associated membrane protein [Goekera
            deserti].
ACCESSION   WP_235928062
VERSION     WP_235928062.1
KEYWORDS    RefSeq.
SOURCE      Goekera deserti
  ORGANISM  Goekera deserti
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Geodermatophilales; Geodermatophilaceae; Goekera.
REFERENCE   1  (residues 1 to 169)
  AUTHORS   van der Palen,C.J., Reijnders,W.N., de Vries,S., Duine,J.A. and van
            Spanning,R.J.
  TITLE     MauE and MauD proteins are essential in methylamine metabolism of
            Paracoccus denitrificans
  JOURNAL   Antonie Van Leeuwenhoek 72 (3), 219-228 (1997)
   PUBMED   9403107
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018942.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07291.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Goekera deserti"
                     /db_xref="taxon:2497753"
     Protein         1..169
                     /product="MauE/DoxX family redox-associated membrane
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0030416 - methylamine metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=17203
     Region          10..>113
                     /region_name="DoxX"
                     /note="cl21527"
                     /db_xref="CDD:451291"
ORIGIN      
        1 mqrpspsllp waataarlll gvvflvagal kvpdpaaaer avrayqllpe alvplaafgl
       61 pvlevavgla llvgvavraa algaavllvv ylaaivsawa rglqidcgcf ssggtvaqgq
      121 taypwdvard lallavaaal arwprsrlal ggrdlptaap trtetsrah
//
LOCUS       WP_235928063             300 aa            linear   BCT 02-MAR-2025
DEFINITION  enoyl-CoA hydratase-related protein [Goekera deserti].
ACCESSION   WP_235928063
VERSION     WP_235928063.1
KEYWORDS    RefSeq.
SOURCE      Goekera deserti
  ORGANISM  Goekera deserti
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Geodermatophilales; Geodermatophilaceae; Goekera.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012596.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00378.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Goekera deserti"
                     /db_xref="taxon:2497753"
     Protein         1..300
                     /product="enoyl-CoA hydratase-related protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=30630
     Region          9..278
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     Site            order(30,32,64,68..72,123,125..127,149..150,153)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(70,127)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(102,115,136..139,151..154,160,162..164,166..167,
                     172..173,175..176,178..179,182,193,196,211,214..215)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
ORIGIN      
        1 mtatvgaatt lryevdagia vitldrpgar naftstmale laaaahaada ddavrvvvvt
       61 gagrdfcvga dlsagadtfd arsraersag agtidgvard wggvaslpfa elrkpviaav
      121 ngaavgigst lvlpmdvria aestrfgfvf arrgivqeaa sswflprvvg isqamewvat
      181 grvfgaeeal rgglvsrvvp ddqlldtalg lareiadnts avsvgaarql lwsmlgaasp
      241 wdahraesra llevgagpda tegvrsflek rparftgplg qgsvagvprw pavpgdvgpg
//
LOCUS       WP_235928178             295 aa            linear   BCT 02-MAR-2025
DEFINITION  TIM barrel protein [Goekera deserti].
ACCESSION   WP_235928178
VERSION     WP_235928178.1
KEYWORDS    RefSeq.
SOURCE      Goekera deserti
  ORGANISM  Goekera deserti
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Geodermatophilales; Geodermatophilaceae; Goekera.
REFERENCE   1  (residues 1 to 295)
  AUTHORS   Fry,J., Wood,M. and Poole,P.S.
  TITLE     Investigation of myo-inositol catabolism in Rhizobium leguminosarum
            bv. viciae and its effect on nodulation competitiveness
  JOURNAL   Mol Plant Microbe Interact 14 (8), 1016-1025 (2001)
   PUBMED   11497462
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013429.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01261.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Goekera deserti"
                     /db_xref="taxon:2497753"
     Protein         1..295
                     /product="TIM barrel protein"
                     /calculated_mol_wt=30058
     Region          15..267
                     /region_name="VpdB_C"
                     /note="C-terminal fragment of effector protein VpdB;
                     cl30226"
                     /db_xref="CDD:421976"
ORIGIN      
        1 mtagrggvld rvagapiswg vcevpgwghq lavtrvlaem rdvglvatef gpdgflppap
       61 adkaavlaqh glravgefvp vvlhdpgvdp vpvldraldg lvaagadvvv laavtggegy
      121 enrpvlaqad wdrllralds laaraadrgv taclhphvgt iveraeevrr vldgsgvplc
      181 ldtghlligg tdpaalaaev pdrvrhvhlk dvddawaarv ragevgyaaa vaagmyrplg
      241 agdvdvagiv tglegagydg wyvleqdtvl sadpapgagp vgdvaaslth lrsla
//
LOCUS       WP_235928209             687 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramoyl-L-alanine amidase [Goekera deserti].
ACCESSION   WP_235928209
VERSION     WP_235928209.1
KEYWORDS    RefSeq.
SOURCE      Goekera deserti
  ORGANISM  Goekera deserti
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Geodermatophilales; Geodermatophilaceae; Goekera.
REFERENCE   1  (residues 1 to 687)
  AUTHORS   Cheng,X., Zhang,X., Pflugrath,J.W. and Studier,F.W.
  TITLE     The structure of bacteriophage T7 lysozyme, a zinc amidase and an
            inhibitor of T7 RNA polymerase
  JOURNAL   Proc Natl Acad Sci U S A 91 (9), 4034-4038 (1994)
   PUBMED   8171031
REFERENCE   2  (residues 1 to 687)
  AUTHORS   Wang,X., Wilkinson,B.J. and Jayaswal,R.K.
  TITLE     Sequence analysis of a Staphylococcus aureus gene encoding a
            peptidoglycan hydrolase activity
  JOURNAL   Gene 102 (1), 105-109 (1991)
   PUBMED   1677905
REFERENCE   3  (residues 1 to 687)
  AUTHORS   Potvin,C., Leclerc,D., Tremblay,G., Asselin,A. and Bellemare,G.
  TITLE     Cloning, sequencing and expression of a Bacillus bacteriolytic
            enzyme in Escherichia coli
  JOURNAL   Mol Gen Genet 214 (2), 241-248 (1988)
   PUBMED   3070348
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013661.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01510.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Goekera deserti"
                     /db_xref="taxon:2497753"
     Protein         1..687
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /EC_number="3.5.1.28"
                     /GO_function="GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=71296
     Region          248..395
                     /region_name="PGRP"
                     /note="Peptidoglycan recognition proteins (PGRPs) are
                     pattern recognition receptors that bind, and in certain
                     cases, hydrolyze peptidoglycans (PGNs) of bacterial cell
                     walls. PGRPs have been divided into three classes: short
                     PGRPs (PGRP-S), that are small (20...; cl02712"
                     /db_xref="CDD:470657"
     Site            order(279,314,415,421,423)
                     /site_type="active"
                     /note="amidase catalytic site [active]"
                     /db_xref="CDD:133475"
     Site            order(279,415,423)
                     /site_type="other"
                     /note="Zn binding residues [ion binding]"
                     /db_xref="CDD:133475"
     Site            order(280..281,310,314,328,339..340,345,415,421..423)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:133475"
ORIGIN      
        1 mrriigglla flvltgtllv lpvyaapaps aepvapsida vdlgsvaepe gaavvtedgt
       61 vvdagpetdv vlgttadpsa tptpstsasp ttssppttap ptaptagtgt dpvaasgrei
      121 dgvealtvsq pdtdrfesvg vtwaqdesvt gvtvqirtkk ssgrwtpwtt veqddvdpse
      181 gsdagvrggt spywtgaakg ievvvqaadg stpedvqvql idpgnsaadv tpgapaitdt
      241 ahaatampai ysraqwgade klmtwepeya ptvkattihh tadsnnysaa dvpaimrsiy
      301 ayhavsrgwg digynvivdk ygrawegrsg glassvvgah aggfntstfg vsmlgnydvv
      361 dtppalletv asviawkfal yaipasgtvs lvssgggtsr yaagtpvtlp tifghrdvga
      421 ttcpgrygys hlgeirgmva qkiaaggpav satpsmadss pqvllrnarg ggmaewttrr
      481 gdpgdlpltc dwdgngteti avfrdgrffl fdsngstaaa tsdfrfgdrg dtplcgdwdg
      541 dgkdtvgiwr ngwfflrnsn tsgvadgyfp fgntdaqpai gdwngdgydt vavyqdatfy
      601 fansnlrpla dgrlaygdrg drvvvgdwtg arrdsmgvfr agtfylttsl srsvadltvg
      661 fgapsdrplv gdwdgnrtvt mgvqrgy
//
LOCUS       WP_235928212             142 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5313 family protein [Goekera deserti].
ACCESSION   WP_235928212
VERSION     WP_235928212.1
KEYWORDS    RefSeq.
SOURCE      Goekera deserti
  ORGANISM  Goekera deserti
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Geodermatophilales; Geodermatophilaceae; Goekera.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036408.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17240.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Goekera deserti"
                     /db_xref="taxon:2497753"
     Protein         1..142
                     /product="DUF5313 family protein"
                     /calculated_mol_wt=15691
     Region          8..114
                     /region_name="DUF5313"
                     /note="Family of unknown function (DUF5313); pfam17240"
                     /db_xref="CDD:435805"
ORIGIN      
        1 mseqpvarpn pvqwlwyamg gglprelsaw vlhdtttrtw glrhivralv qlavpiavvl
       61 lvvpgpfwir amaalgglim glifsiaymp ettehrvvka gypagtaera haeasrlreq
      121 edsrarraaa arraeryrar ns
//
LOCUS       WP_235928241              91 aa            linear   BCT 02-MAR-2025
DEFINITION  HAMP domain-containing protein [Goekera deserti].
ACCESSION   WP_235928241
VERSION     WP_235928241.1
KEYWORDS    RefSeq.
SOURCE      Goekera deserti
  ORGANISM  Goekera deserti
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Geodermatophilales; Geodermatophilaceae; Goekera.
REFERENCE   1  (residues 1 to 91)
  AUTHORS   Aravind,L. and Ponting,C.P.
  TITLE     The cytoplasmic helical linker domain of receptor histidine kinase
            and methyl-accepting proteins is common to many prokaryotic
            signalling proteins
  JOURNAL   FEMS Microbiol Lett 176 (1), 111-116 (1999)
   PUBMED   10418137
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012876.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00672.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Goekera deserti"
                     /db_xref="taxon:2497753"
     Protein         1..91
                     /product="HAMP domain-containing protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=9458
     Region          <2..>88
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
ORIGIN      
        1 mlvargtsrg lgrvrtsler ladgdlthdt gidqrddvgr maaaldsalg slrsvmasva
       61 artalgstqv avdelsrmav dlrgsvarsr y
//
LOCUS       WP_235928243             424 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)/FAD-dependent oxidoreductase [Goekera deserti].
ACCESSION   WP_235928243
VERSION     WP_235928243.1
KEYWORDS    RefSeq.
SOURCE      Goekera deserti
  ORGANISM  Goekera deserti
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Geodermatophilales; Geodermatophilaceae; Goekera.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11458465
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Goekera deserti"
                     /db_xref="taxon:2497753"
     Protein         1..424
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /EC_number="1.-.-.-"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=45587
     Region          1..424
                     /region_name="Ppro0129"
                     /note="Predicted flavin-containing amine oxidase [General
                     function prediction only]; COG2907"
                     /db_xref="CDD:442151"
ORIGIN      
        1 mtrptaavvg agvsgltaay llqkthdvtl feseprlggh ahthdvetpd drvvpidtgf
       61 ivhnertypn llrlfaelgv atqptemsms iscggcgley agarglpgvf aqkkqlanpr
      121 ylkmltevtr fhaqarrlla aadagtgfdg ltlgaflalg gysdyfvrhf mvpvvscvws
      181 sgtglslqyp aeylfrflan hgmlsvsgsp qwrtvtggsr ayvekaakgl tavqtgagvr
      241 sltrhpdgvq lvdgdgerhe advvvvathp dqalrllgdp tdaeraalga fsysrnetvl
      301 htdstvlpra qaarsswnyr mgacdqqvea vqvtywmnrl haidepldyl vtlngtdrvp
      361 agsvlrrmvy ehplytpesv aaqrllpaln tgrtafagay hgwgfhedgc asgvraaesl
      421 gsgw
//
LOCUS       WP_235928288             303 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3152 domain-containing protein [Goekera deserti].
ACCESSION   WP_235928288
VERSION     WP_235928288.1
KEYWORDS    RefSeq.
SOURCE      Goekera deserti
  ORGANISM  Goekera deserti
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Geodermatophilales; Geodermatophilaceae; Goekera.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11350.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Goekera deserti"
                     /db_xref="taxon:2497753"
     Protein         1..303
                     /product="DUF3152 domain-containing protein"
                     /calculated_mol_wt=31555
     Region          124..303
                     /region_name="ZnMc"
                     /note="Zinc-dependent metalloprotease. This super-family
                     of metalloproteases contains two major branches, the
                     astacin-like proteases and the adamalysin/reprolysin-like
                     proteases. Both branches have wide phylogenetic
                     distribution, and contain sub-families, which...; cl00064"
                     /db_xref="CDD:469599"
     Site            order(262..263,266,272)
                     /site_type="active"
                     /db_xref="CDD:239796"
ORIGIN      
        1 mpprprprpd vdpdpasrtv raagplvadr dpgrrrhaaa hvsqavrlqr farrhgwray
       61 aipvltvatf lalfqvarqp apvdtptdta vlaaeqpgaa dtlaaaegeg apvapvpvpd
      121 qatgyvekga gtvsvvdgts pvygsgplqr fvvevedgie vdgpsfatav eatlgdprsw
      181 gaggamsfqr vgaadaaags ydfkvtlvsp gnmevycpgv gtggytscry geravvnlar
      241 wetavpdyag diatyrqyvv nhevghalgn gheecpgpgl papvmqqqtl glegcvknaw
      301 pfp
//
LOCUS       WP_235928331             479 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Goekera deserti].
ACCESSION   WP_235928331
VERSION     WP_235928331.1
KEYWORDS    RefSeq.
SOURCE      Goekera deserti
  ORGANISM  Goekera deserti
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Geodermatophilales; Geodermatophilaceae; Goekera.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Goekera deserti"
                     /db_xref="taxon:2497753"
     Protein         1..479
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47885
     Region          21..426
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(27..28,31..32,35,66,116..117,119..121,124,144,
                     147..148,151,267,270..271,274..276,279,307,311,363..364,
                     368,372,388,391..392,395..396,399)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 madqtagvfd rrhrlttagl lmlitfvafe amavatamps avreldglsw ygwpftgllv
       61 aqvigmvvgg dvgdrrgvrt allwgvglfa lgllacgvsv tmvafvagrv lqglgaglis
      121 vslfvvagqa ysaalrpalf gafsaawvlp allgplvagl lathatwrlv flgilpliav
      181 glllvlpats rlpvpterpr pararrawav ltglgvgclq yagqrldlia vgiavfglaa
      241 lvaglrpllp agtarlrrgl ptviavrgll sgsffgvdal lplalsevhg ysavqagipl
      301 tvgalgwsaa sqlqarrpdt srvrllqigf vciavgvagt alavapglgg fsayvtwsia
      361 gfgmglgmps vgvllldlsp ehrrgadsaa lqiadvvgaa lciglagvlv aaatggalpl
      421 stallvaiav fttiavagal aagraappad ggtrpapgvg vqssspsgtg gpattlaps
//
LOCUS       WP_235928343             370 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Goekera deserti].
ACCESSION   WP_235928343
VERSION     WP_235928343.1
KEYWORDS    RefSeq.
SOURCE      Goekera deserti
  ORGANISM  Goekera deserti
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Geodermatophilales; Geodermatophilaceae; Goekera.
REFERENCE   1  (residues 1 to 370)
  AUTHORS   Gao,G., Nara,T., Nakajima-Shimada,J. and Aoki,T.
  TITLE     Novel organization and sequences of five genes encoding all six
            enzymes for de novo pyrimidine biosynthesis in Trypanosoma cruzi
  JOURNAL   J Mol Biol 285 (1), 149-161 (1999)
   PUBMED   9878395
REFERENCE   2  (residues 1 to 370)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
REFERENCE   3  (residues 1 to 370)
  AUTHORS   Nygaard,P., Duckert,P. and Saxild,H.H.
  TITLE     Role of adenine deaminase in purine salvage and nitrogen metabolism
            and characterization of the ade gene in Bacillus subtilis
  JOURNAL   J Bacteriol 178 (3), 846-853 (1996)
   PUBMED   8550522
REFERENCE   4  (residues 1 to 370)
  AUTHORS   Lollier,M., Jaquet,L., Nedeva,T., Lacroute,F., Potier,S. and
            Souciet,J.L.
  TITLE     As in Saccharomyces cerevisiae, aspartate transcarbamoylase is
            assembled on a multifunctional protein including a
            dihydroorotase-like cryptic domain in Schizosaccharomyces pombe
  JOURNAL   Curr Genet 28 (2), 138-149 (1995)
   PUBMED   8590465
REFERENCE   5  (residues 1 to 370)
  AUTHORS   Jabri,E., Carr,M.B., Hausinger,R.P. and Karplus,P.A.
  TITLE     The crystal structure of urease from Klebsiella aerogenes
  JOURNAL   Science 268 (5213), 998-1004 (1995)
   PUBMED   7754395
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01979.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Goekera deserti"
                     /db_xref="taxon:2497753"
     Protein         1..370
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=38600
     Region          20..>66
                     /region_name="AllB"
                     /note="Dihydroorotase or related cyclic amidohydrolase
                     [Nucleotide transport and metabolism]; COG0044"
                     /db_xref="CDD:439814"
     Region          51..356
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
     Site            order(62,64,197,217,290)
                     /site_type="active"
                     /db_xref="CDD:238617"
ORIGIN      
        1 mttsparagr qlpdlhlsgv llpagehrdv wvrhgritfe pvpgaetvsr ggwllpglvd
       61 ahchvgiarg ggpaeglaql reqalaeraa gvlalrdcgs pvdtreldeh pdlprivrag
      121 rhiarhrryl pglavevepd elvagvraqa ragdgwvklv gdwidreagd lgplwtrevl
      181 tdavaaahae garvtahtfg tdalpdlida gidciehgtg ltedlvarma argtavvptl
      241 vnvenfpgfa sagekrfpay astmrrlyag sgavvraafe agvpvfagtd agggidhgvv
      301 adevralhaa glpaeaavaa aswaartwlg lsvieegapa dlvvyaadpr adldtlrrpq
      361 rtvlrgavvg
//
LOCUS       WP_235928466             204 aa            linear   BCT 02-MAR-2025
DEFINITION  antibiotic biosynthesis monooxygenase [Goekera deserti].
ACCESSION   WP_235928466
VERSION     WP_235928466.1
KEYWORDS    RefSeq.
SOURCE      Goekera deserti
  ORGANISM  Goekera deserti
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Geodermatophilales; Geodermatophilaceae; Goekera.
REFERENCE   1  (residues 1 to 204)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015925.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03992.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Goekera deserti"
                     /db_xref="taxon:2497753"
     Protein         1..204
                     /product="antibiotic biosynthesis monooxygenase"
                     /calculated_mol_wt=22372
     Region          24..198
                     /region_name="COG3224"
                     /note="Antibiotic biosynthesis monooxygenase (ABM)
                     superfamily enzyme [General function prediction only]"
                     /db_xref="CDD:442457"
ORIGIN      
        1 mtrattnrhr pgrtvgdrts agttqpvtvt aarvvspght seferwagqm qqlvarfpgh
       61 lgssllrpgp ggneyhlvyr ftdaaaleaw ersperaeav agvqalvede ryaradglds
      121 fftvpprsgp rwrmtaltvv avfalsavfq lmagplvgdw pwplrsllsa vfivvslgyv
      181 vmprltrwag rwlrpaersh ptar
//
LOCUS       WP_235928623             237 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Nesterenkonia haasae].
ACCESSION   WP_235928623
VERSION     WP_235928623.1
KEYWORDS    RefSeq.
SOURCE      Nesterenkonia haasae
  ORGANISM  Nesterenkonia haasae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Nesterenkonia.
REFERENCE   1  (residues 1 to 237)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Nesterenkonia haasae"
                     /db_xref="taxon:2587813"
     Protein         1..237
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=25575
     Region          19..228
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mmsdtdqegp aprglsvera eeslrvlivd dhavarrgia ayldvlddiv aigeasdgre
       61 allllaelet ygnlpdivll dlvmprldgm stmkeirrkh palkvvvlts fdeverlntm
      121 lelgavgyll kdagplevas airaaardev fidsamtkkl tqamavpsgv salterertv
      181 lilvgqgrsn reiaqelnis ertarthvsn mlaklnvrsr tqaaliavka gmvpplt
//
LOCUS       WP_235928684             114 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Nesterenkonia haasae].
ACCESSION   WP_235928684
VERSION     WP_235928684.1
KEYWORDS    RefSeq.
SOURCE      Nesterenkonia haasae
  ORGANISM  Nesterenkonia haasae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Nesterenkonia.
REFERENCE   1  (residues 1 to 114)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 114)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Nesterenkonia haasae"
                     /db_xref="taxon:2587813"
     Protein         1..114
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=12731
     Region          2..>91
                     /region_name="yhbS"
                     /note="Predicted N-acetyltransferase YhbS [General
                     function prediction only]; COG3153"
                     /db_xref="CDD:442387"
ORIGIN      
        1 mirsarprdl ndlreieraa glafydlgmd siaedepptl eelavfqeae rawvavdedd
       61 rptayllldt vdgnahieqv tvhpdharqg ivksayrirr rlgagpqper tnpd
//
LOCUS       WP_235928685             287 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Nesterenkonia
            haasae].
ACCESSION   WP_235928685
VERSION     WP_235928685.1
KEYWORDS    RefSeq.
SOURCE      Nesterenkonia haasae
  ORGANISM  Nesterenkonia haasae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Nesterenkonia.
REFERENCE   1  (residues 1 to 287)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Nesterenkonia haasae"
                     /db_xref="taxon:2587813"
     Protein         1..287
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=30317
     Region          19..245
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(23,25..27,46..48,80..82,116..118,142,146,165..168)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(95,118,142,146)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mspvqsphss pmpsrnhrvl lagcgdlgah vgrllhqagh kvtgvrrnad avnvpfpvlg
       61 mdladpgttq lpeadavvia ltadsydaag yerayrstlr glakalptap drvvlvsstg
      121 algehegeli teeseplpdr etgkvllase qdaqelfdsv tvlraagiyg pgrtrtidqv
      181 lrgkpvdhgr itnrihrddl saaiprllga enppallhgv drepaplgrv vefvagllnv
      241 pvpedsgsga lhgktldgta lhrfmgesgl qyptfregys alvedrg
//
LOCUS       WP_235928858              35 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1905 domain-containing protein [Marisediminicola senii].
ACCESSION   WP_235928858
VERSION     WP_235928858.1
KEYWORDS    RefSeq.
SOURCE      Marisediminicola senii
  ORGANISM  Marisediminicola senii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Marisediminicola.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020496.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08922.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..35
                     /organism="Marisediminicola senii"
                     /db_xref="taxon:2711233"
     Protein         1..35
                     /product="DUF1905 domain-containing protein"
                     /calculated_mol_wt=3476
     Region          <1..32
                     /region_name="DUF1905"
                     /note="Domain of unknown function (DUF1905); pfam08922"
                     /db_xref="CDD:430320"
ORIGIN      
        1 mptgtgghmv slsatvrksl gkqigdvvqv vvtpr
//
LOCUS       WP_235928975             145 aa            linear   BCT 02-MAR-2025
DEFINITION  Rv3235 family protein [Marisediminicola senii].
ACCESSION   WP_235928975
VERSION     WP_235928975.1
KEYWORDS    RefSeq.
SOURCE      Marisediminicola senii
  ORGANISM  Marisediminicola senii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Marisediminicola.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039460.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20060.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Marisediminicola senii"
                     /db_xref="taxon:2711233"
     Protein         1..145
                     /product="Rv3235 family protein"
                     /calculated_mol_wt=15958
     Region          35..145
                     /region_name="DUF6459"
                     /note="Family of unknown function (DUF6459); pfam20060"
                     /db_xref="CDD:466277"
ORIGIN      
        1 msdalpapap arpshvrfha deffsfqpad rstlpspepl lenltrcvie ilagardleq
       61 isrwvtddvy rhllkrvvls skarqakgqv ptrptftigs tslcepragv veavvivrgr
      121 vraravairl egldnrwrat ainvl
//
LOCUS       WP_235929058             426 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Marisediminicola senii].
ACCESSION   WP_235929058
VERSION     WP_235929058.1
KEYWORDS    RefSeq.
SOURCE      Marisediminicola senii
  ORGANISM  Marisediminicola senii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Marisediminicola.
REFERENCE   1  (residues 1 to 426)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Marisediminicola senii"
                     /db_xref="taxon:2711233"
     Protein         1..426
                     /product="AMP-binding protein"
                     /calculated_mol_wt=42602
     Region          53..390
                     /region_name="PRK07824"
                     /note="o-succinylbenzoate--CoA ligase"
                     /db_xref="CDD:236108"
ORIGIN      
        1 mralhvidad dpaamllalr etlsasgpal lpvagglagl sspapaevsl rtavvvetsg
       61 stgaakrval sadallasaa asatalgapg qwllalpahy iaglnvlvrs iaagtdpvil
      121 gtghvdpaaf vaacgamdaa aprftslvpa qlatlvdaae geaggaasas agstgtstvl
      181 aalrrfdsvl vggqatpaal ldraaalgir vtrsygsset aggcvydgvp igtttarird
      241 gqvelggpvl aegylgdpgl tadrfiesdg arwyrtadag tltdgrlsit gridrviisg
      301 gekvsldeve rmlhvaghpr alavsvpndr wgeaiavvsp tpvdldelre llgsrlgraa
      361 rptsvrvvdr ipmlasgkpd rralaelagt gqhatgqdst gqhatgqdst gqdstgqhat
      421 gqhgsa
//
LOCUS       WP_235929136             142 aa            linear   BCT 02-MAR-2025
DEFINITION  EF-hand domain-containing protein [Cereibacter sphaeroides].
ACCESSION   WP_235929136
VERSION     WP_235929136.1
KEYWORDS    RefSeq.
SOURCE      Cereibacter sphaeroides
  ORGANISM  Cereibacter sphaeroides
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Cereibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025203.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13833.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Cereibacter sphaeroides"
                     /db_xref="taxon:1063"
     Protein         1..142
                     /product="EF-hand domain-containing protein"
                     /GO_function="GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=14701
     Region          12..137
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
ORIGIN      
        1 malvfmlqvt gaaaqtpgam fveqwdadgd grvtlgeaqs rradlfdafd sdgdgalgpq
       61 eladmgamra amqeanraaa grasrvgtsg aagpdgpgrl drdgdgrvsr defvgstgsw
      121 fawrdrdgdg altsadfgrg rw
//
LOCUS       WP_235929118             255 aa            linear   BCT 02-MAR-2025
DEFINITION  RNase H family protein [Marisediminicola senii].
ACCESSION   WP_235929118
VERSION     WP_235929118.1
KEYWORDS    RefSeq.
SOURCE      Marisediminicola senii
  ORGANISM  Marisediminicola senii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Marisediminicola.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012304.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00075.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Marisediminicola senii"
                     /db_xref="taxon:2711233"
     Protein         1..255
                     /product="RNase H family protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /calculated_mol_wt=26552
     Region          2..154
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     Site            order(7..10,37..39,42,65,115)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260010"
ORIGIN      
        1 mitaaadgsa lgnpgpagwa wyvdddcwaa ggwkhatnnq gelmavldlf rstahlddel
       61 lvlcdsqyvi nsvtkwmrgw kakgwrkgdg kpvmnlellk eidaalvgrk yrfewvkgha
      121 nhplneaada raravaeafq rgravpsgpg wvrkgdvdaa arpaalrggg lpgaaepaap
      181 aapatpaaav paaapaaaah pelfsfdddg tdevpaaaas tvsvtvslss dqfarltrra
      241 taagispeea lrdli
//
LOCUS       WP_235929062             338 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 113 [Marisediminicola senii].
ACCESSION   WP_235929062
VERSION     WP_235929062.1
KEYWORDS    RefSeq.
SOURCE      Marisediminicola senii
  ORGANISM  Marisediminicola senii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Marisediminicola.
REFERENCE   1  (residues 1 to 338)
  AUTHORS   Lin,H.Y., Chen,C.Y., Lin,T.C., Yeh,L.F., Hsieh,W.C., Gao,S.,
            Burnouf,P.A., Chen,B.M., Hsieh,T.J., Dashnyam,P., Kuo,Y.H., Tu,Z.,
            Roffler,S.R. and Lin,C.H.
  TITLE     Entropy-driven binding of gut bacterial beta-glucuronidase
            inhibitors ameliorates irinotecan-induced toxicity
  JOURNAL   Commun Biol 4 (1), 280 (2021)
   PUBMED   33664385
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 338)
  AUTHORS   Bardy,P., Fuzik,T., Hrebik,D., Pantucek,R., Thomas Beatty,J. and
            Plevka,P.
  TITLE     Structure and mechanism of DNA delivery of a gene transfer agent
  JOURNAL   Nat Commun 11 (1), 3034 (2020)
   PUBMED   32541663
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 338)
  AUTHORS   You,X., Qin,Z., Yan,Q., Yang,S., Li,Y. and Jiang,Z.
  TITLE     Structural insights into the catalytic mechanism of a novel
            glycoside hydrolase family 113 beta-1,4-mannanase from
            Amphibacillus xylanus
  JOURNAL   J Biol Chem 293 (30), 11746-11757 (2018)
   PUBMED   29871927
REFERENCE   4  (residues 1 to 338)
  AUTHORS   Williams,R.J., Iglesias-Fernandez,J., Stepper,J., Jackson,A.,
            Thompson,A.J., Lowe,E.C., White,J.M., Gilbert,H.J., Rovira,C.,
            Davies,G.J. and Williams,S.J.
  TITLE     Combined inhibitor free-energy landscape and structural analysis
            reports on the mannosidase conformational coordinate
  JOURNAL   Angew Chem Int Ed Engl 53 (4), 1087-1091 (2014)
   PUBMED   24339341
REFERENCE   5  (residues 1 to 338)
  AUTHORS   Zhang,Y., Ju,J., Peng,H., Gao,F., Zhou,C., Zeng,Y., Xue,Y., Li,Y.,
            Henrissat,B., Gao,G.F. and Ma,Y.
  TITLE     Biochemical and structural characterization of the intracellular
            mannanase AaManA of Alicyclobacillus acidocaldarius reveals a novel
            glycoside hydrolase family belonging to clan GH-A
  JOURNAL   J Biol Chem 283 (46), 31551-31558 (2008)
   PUBMED   18755688
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046780.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22612.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Marisediminicola senii"
                     /db_xref="taxon:2711233"
     Protein         1..338
                     /product="glycoside hydrolase family 113"
                     /GO_function="GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /calculated_mol_wt=38116
     Region          23..322
                     /region_name="GH113-like"
                     /note="Glycoside hydrolase family 113 beta-mannosidase and
                     similar proteins; cl16298"
                     /db_xref="CDD:449734"
     Site            order(105,111..112,159,190,211,239,289..290,307)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:381624"
ORIGIN      
        1 msvrdtspaa gaaqalfggh fsgmtwgwtg vrgtwataea thsldelsrt ninwvviaya
       61 aqqanaqetv vewreapapt ddeirwaina srergykvcl kptvnckdgt wrgyigffdw
      121 dvpgeatwge wfnsytqymv hmatlaeems vdlfcigcem vradsrenew relirqvrav
      181 ysgpityncd kyqedhltww davdvisasg yyptgswqtq ldriapvvak ydkpflfiea
      241 gcpsrdtspa kpndwtlagk vsveaqadyl aemfeenssr dwvagfalwd wpaklyspte
      301 adqnddycmy akpgekvvar yygrrnaeqv svgegrpe
//
LOCUS       WP_235929224             264 aa            linear   BCT 02-MAR-2025
DEFINITION  biliverdin-producing heme oxygenase [Cereibacter sphaeroides].
ACCESSION   WP_235929224
VERSION     WP_235929224.1
KEYWORDS    RefSeq.
SOURCE      Cereibacter sphaeroides
  ORGANISM  Cereibacter sphaeroides
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Cereibacter.
REFERENCE   1  (residues 1 to 264)
  AUTHORS   Wilks,A.
  TITLE     Heme oxygenase: evolution, structure, and mechanism
  JOURNAL   Antioxid Redox Signal 4 (4), 603-614 (2002)
   PUBMED   12230872
REFERENCE   2  (residues 1 to 264)
  AUTHORS   Ryter,S.W. and Tyrrell,R.M.
  TITLE     The heme synthesis and degradation pathways: role in oxidant
            sensitivity. Heme oxygenase has both pro- and antioxidant
            properties
  JOURNAL   Free Radic Biol Med 28 (2), 289-309 (2000)
   PUBMED   11281297
REFERENCE   3  (residues 1 to 264)
  AUTHORS   Maines,M.D.
  TITLE     Heme oxygenase: function, multiplicity, regulatory mechanisms, and
            clinical applications
  JOURNAL   FASEB J 2 (10), 2557-2568 (1988)
   PUBMED   3290025
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 13040606
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Cereibacter sphaeroides"
                     /db_xref="taxon:1063"
     Protein         1..264
                     /product="biliverdin-producing heme oxygenase"
                     /EC_number="1.14.14.18"
                     /GO_function="GO:0004392 - heme oxygenase (decyclizing)
                     activity [Evidence IEA]"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006788 - heme oxidation [Evidence IEA]"
                     /calculated_mol_wt=28914
     Region          70..257
                     /region_name="HemeO-bac"
                     /note="heme oxygenase found in pathogenic bacteria;
                     cd19166"
                     /db_xref="CDD:350857"
     Site            order(75,82,85..86,177..178,181..182,184..185,188..189,
                     219,248,251)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:350857"
     Region          170..196
                     /region_name="kinked helix"
                     /note="kinked helix [structural motif]"
                     /db_xref="CDD:350857"
ORIGIN      
        1 mgdriasvcy arrlseilmn mshilqhdel apslrrrvrg qvaiskpasc plgrgsaslq
       61 pdpckrvmpl srdlrektgm lhnraetllg lpsgimgwad yvdwlrhfla lydpierriv
      121 afggwsglas fdpdpghsrr liqdlhalgi dtdriprapa eycppltnfa ralgaryvle
      181 gsalggrvil hhlkkrigde ignataffgg pshgtathwr afqaaldrfg aahpdkradv
      241 lagaaatfta llewftpfva arrv
//
LOCUS       WP_235929250              98 aa            linear   BCT 02-MAR-2025
DEFINITION  isocitrate/isopropylmalate family dehydrogenase, partial
            [Cereibacter sphaeroides].
ACCESSION   WP_235929250
VERSION     WP_235929250.1
KEYWORDS    RefSeq.
SOURCE      Cereibacter sphaeroides
  ORGANISM  Cereibacter sphaeroides
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Cereibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012407.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00180.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Cereibacter sphaeroides"
                     /db_xref="taxon:1063"
     Protein         <1..98
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /GO_function="GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
     Region          <1..97
                     /region_name="Iso_dh"
                     /note="Isocitrate/isopropylmalate dehydrogenase; cl00445"
                     /db_xref="CDD:444908"
ORIGIN      
        1 gtigiapsgn inperafpsl fepvhgsapd iagqgianpv gqiwagamml dhlghgeaaa
       61 eimaaiervl adprlrtrdl agaadtvtcg kaivealg
//
LOCUS       WP_235929259             333 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Cereibacter
            sphaeroides].
ACCESSION   WP_235929259
VERSION     WP_235929259.1
KEYWORDS    RefSeq.
SOURCE      Cereibacter sphaeroides
  ORGANISM  Cereibacter sphaeroides
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Cereibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Cereibacter sphaeroides"
                     /db_xref="taxon:1063"
     Protein         1..>333
                     /product="ABC transporter substrate-binding protein"
     Region          1..>333
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 msrnitmniy etlygfsdsi vpipilatgv eisedgltyr fplragvkfh ngkemgaedv
       61 raslerykai ggtasmlagv tsieasgple vtltmekpfp gfleafaspr apaviipaee
      121 agkpaneiav igtgpykfve yvpdshvrle rfadyaadet hadidgfggk ktayldsvtf
      181 rvipepgaav aaleagevql leqipvptar rlagnsemkv yenspwaflv fifnlneapa
      241 dnpkfreavq ialnseeima iateglfnly hgwmyegtty dageigkdry nvadldrara
      301 llaeagysgq pftiltdtqg pernkaavvi aeq
//
LOCUS       WP_235929415             564 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Cellulomonas citrea].
ACCESSION   WP_235929415
VERSION     WP_235929415.1
KEYWORDS    RefSeq.
SOURCE      Cellulomonas citrea
  ORGANISM  Cellulomonas citrea
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Cellulomonadaceae; Cellulomonas.
REFERENCE   1  (residues 1 to 564)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Cellulomonas citrea"
                     /db_xref="taxon:1909423"
     Protein         1..564
                     /product="AMP-binding protein"
                     /calculated_mol_wt=60744
     Region          15..563
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(213,216..221,223..224)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(216,332..333,354..359,440,452,455,466,547)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(216,257..258,305,307..308,311,332..333,354..359,440,
                     452,455,463..466,528)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(257,307..308,311,332,463..465,522,528)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
ORIGIN      
        1 msflsvdepa lhtppttvnv pdepltatld ravrdfpdrv avdflgrttt waelgrqvrr
       61 aagalhalgv rpgdrvalvl pnstshvvaf wavlrlgaiv vehnptytap amahqladsg
      121 atvvvaweka vptvlearaa tsvrrvvavd lsqdlpttkr lalslplpaa kalrtrlrgp
      181 vppqvdswhr llrrarplpa sypaprsgdi allqytggtt gtpkgatllh rnlvanalqg
      241 aawtgaepgt evvygvlpff hafgltlcls yttriagtvv lfpnfdpaqv laaqkrrpgt
      301 flpavatmld rlldaadreg adltsfryai cgamalppat aarwekathg laiegygmte
      361 tspvalgnpl taarrpgllg lpfpstrirv vdpedtdrdm pdgaqgelli agpqvfagyw
      421 nrpeetaeql lpggwlrtgd lvvvepdgfv rlvdrikemi vcdgfkvyps qvedhlrlmp
      481 gvldvavvge pagdhgesvv aaivldelir nvdlaavraw geqhlaryal prrlvvlpel
      541 prsqvgkvlr rvvrdhvltl rees
//
LOCUS       WP_235929488             136 aa            linear   BCT 02-MAR-2025
DEFINITION  Rho termination factor N-terminal domain-containing protein,
            partial [Cellulomonas citrea].
ACCESSION   WP_235929488
VERSION     WP_235929488.1
KEYWORDS    RefSeq.
SOURCE      Cellulomonas citrea
  ORGANISM  Cellulomonas citrea
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Cellulomonadaceae; Cellulomonas.
REFERENCE   1  (residues 1 to 136)
  AUTHORS   Bogden,C.E., Fass,D., Bergman,N., Nichols,M.D. and Berger,J.M.
  TITLE     The structural basis for terminator recognition by the Rho
            transcription termination factor
  JOURNAL   Mol Cell 3 (4), 487-493 (1999)
   PUBMED   10230401
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019139.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07498.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Cellulomonas citrea"
                     /db_xref="taxon:1909423"
     Protein         1..>136
                     /product="Rho termination factor N-terminal
                     domain-containing protein"
                     /GO_process="GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
     Region          7..>136
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
ORIGIN      
        1 mtdiidtaat tsggsapapa lsalrlpelq amaatlgvkg tskmrkgdll aaisgagqpa
       61 aqraertgap epaadrapap ertretapep artadaeaap qraqrparaa rngetagrsg
      121 ehdaagdgha epager
//
LOCUS       WP_235929519             419 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme [Cellulomonas
            citrea].
ACCESSION   WP_235929519
VERSION     WP_235929519.1
KEYWORDS    RefSeq.
SOURCE      Cellulomonas citrea
  ORGANISM  Cellulomonas citrea
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Cellulomonadaceae; Cellulomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Cellulomonas citrea"
                     /db_xref="taxon:1909423"
     Protein         1..419
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /calculated_mol_wt=43903
     Region          24..419
                     /region_name="Bna5"
                     /note="Kynureninase [Amino acid transport and metabolism];
                     COG3844"
                     /db_xref="CDD:443054"
ORIGIN      
        1 mtstretelr araaqldaah aatdlrtrfl lpegvvyldg nslgalpagv paavedavrr
       61 qwgrdliasw nshgwwqape rvgdrlapll gaaagqvlvg esttvrlhqa lhaaarmrpa
      121 gdvlvvdpas fptdlyvsag vaeqvgwqvv ecspdelagt ladlgsqgrs vaavsmshvd
      181 frtgrlwdlp titaqahaag alavwdlchs agavpvdlda hdvdlavgcg ykflnggpga
      241 paflyvahrh laafsnvlpg whghaepfam hagyspapgv grarigttpl lsllaleaal
      301 avfdgvdvra vrarslslta ylreaietlv pgtrfaspal deqrgsqvsv vhphaygvvq
      361 aliargvigd frtpdvvrlg vaapylthgq mleaatalaq vlaqgehldp ayaerptvt
//
LOCUS       WP_235929646             137 aa            linear   BCT 02-MAR-2025
DEFINITION  SAM-dependent methyltransferase, partial [Cellulomonas citrea].
ACCESSION   WP_235929646
VERSION     WP_235929646.1
KEYWORDS    RefSeq.
SOURCE      Cellulomonas citrea
  ORGANISM  Cellulomonas citrea
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Cellulomonadaceae; Cellulomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00590.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Cellulomonas citrea"
                     /db_xref="taxon:1909423"
     Protein         <1..137
                     /product="SAM-dependent methyltransferase"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
     Region          <13..84
                     /region_name="RsmI"
                     /note="16S rRNA C1402 (ribose-2'-O) methylase RsmI
                     [Translation, ribosomal structure and biogenesis];
                     COG0313"
                     /db_xref="CDD:440082"
ORIGIN      
        1 pgeraralaa laseprtivl feaphrleal laalveafga drraavcrel tktheevlrg
       61 plqelltwar sgqvrgeivv vvagapapag qideamvagv rarvdggerl kdvvaevaaa
      121 tgvgrrelya aavagah
//
LOCUS       WP_235929714             294 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5684 domain-containing protein, partial [Cellulomonas citrea].
ACCESSION   WP_235929714
VERSION     WP_235929714.1
KEYWORDS    RefSeq.
SOURCE      Cellulomonas citrea
  ORGANISM  Cellulomonas citrea
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Cellulomonadaceae; Cellulomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039825.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18936.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Cellulomonas citrea"
                     /db_xref="taxon:1909423"
     Protein         1..>294
                     /product="DUF5684 domain-containing protein"
     Region          50..125
                     /region_name="DUF5684"
                     /note="Family of unknown function (DUF5684); pfam18936"
                     /db_xref="CDD:465919"
ORIGIN      
        1 mslvqsaspd gsaatvavlt lvglvlgaav ycwyaaalaa vlrrlgapgw rawvpvlnem
       61 ellerggvpg wsvvyffvpv valyglylhv vaahritvrl grgagatvla llvppvwasl
      121 lgwsrampeq dlaprvaspt glaaptgplv desemplwag aqpvvvdvpr tapalspwap
      181 agepapappm vqvpvapvpq apvgpvlpmp atpvlppaea sapgwtapvw gvpdnpvlpp
      241 pdapvaapta wsapapvppv apptvpapaa apappvapvp pasapavpvp aapp
//
LOCUS       WP_235929696             150 aa            linear   BCT 02-MAR-2025
DEFINITION  dynamin family protein, partial [Cellulomonas citrea].
ACCESSION   WP_235929696
VERSION     WP_235929696.1
KEYWORDS    RefSeq.
SOURCE      Cellulomonas citrea
  ORGANISM  Cellulomonas citrea
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Cellulomonadaceae; Cellulomonas.
REFERENCE   1  (residues 1 to 150)
  AUTHORS   Warnock,D.E. and Schmid,S.L.
  TITLE     Dynamin GTPase, a force-generating molecular switch
  JOURNAL   Bioessays 18 (11), 885-893 (1996)
   PUBMED   8939066
REFERENCE   2  (residues 1 to 150)
  AUTHORS   Obar,R.A., Collins,C.A., Hammarback,J.A., Shpetner,H.S. and
            Vallee,R.B.
  TITLE     Molecular cloning of the microtubule-associated mechanochemical
            enzyme dynamin reveals homology with a new family of GTP-binding
            proteins
  JOURNAL   Nature 347 (6290), 256-261 (1990)
   PUBMED   2144893
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012570.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00350.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Cellulomonas citrea"
                     /db_xref="taxon:1909423"
     Protein         1..>150
                     /product="dynamin family protein"
     Region          69..>126
                     /region_name="YeeP"
                     /note="Predicted GTPase [General function prediction
                     only]; COG3596"
                     /db_xref="CDD:442815"
ORIGIN      
        1 mddapheevg rarhgvpvep adpgtglvda lvllraavag tglplavdga dqarllrtgm
       61 ldqlddyllp rlraaaapvl vvlggstgag kstllnsllg eqvsaagvlr pttrwpvlvh
      121 hpldagwfhg drvlpglprl ttaaaddgag
//
LOCUS       WP_235929738             169 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Cellulomonas
            citrea].
ACCESSION   WP_235929738
VERSION     WP_235929738.1
KEYWORDS    RefSeq.
SOURCE      Cellulomonas citrea
  ORGANISM  Cellulomonas citrea
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Cellulomonadaceae; Cellulomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Cellulomonas citrea"
                     /db_xref="taxon:1909423"
     Protein         <1..>169
                     /product="ABC transporter substrate-binding protein"
     Region          <1..>168
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 gykprnepps rnaggkvanf kriewhilpd pataaaalst gevdwwerpl adlqpmlakn
       61 adikrevidk agrgaiirln hlqppfnnpk vraavrmavk qedymraaqg ddtemwqvcr
      121 nlwwrgtpyy tgeqedlmpq slekakvalk dsgykgekvv iinptdfpd
//
LOCUS       WP_235929722             521 aa            linear   BCT 02-MAR-2025
DEFINITION  alkaline phosphatase family protein [Cellulomonas citrea].
ACCESSION   WP_235929722
VERSION     WP_235929722.1
KEYWORDS    RefSeq.
SOURCE      Cellulomonas citrea
  ORGANISM  Cellulomonas citrea
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Cellulomonadaceae; Cellulomonas.
REFERENCE   1  (residues 1 to 521)
  AUTHORS   Jin-Hua,P., Goding,J.W., Nakamura,H. and Sano,K.
  TITLE     Molecular cloning and chromosomal localization of PD-Ibeta (PDNP3),
            a new member of the human phosphodiesterase I genes
  JOURNAL   Genomics 45 (2), 412-415 (1997)
   PUBMED   9344668
REFERENCE   2  (residues 1 to 521)
  AUTHORS   Peiffer,W.E., Desrosiers,M.G. and Menick,D.R.
  TITLE     Cloning and expression of the unique Ca2+-ATPase from
            Flavobacterium odoratum
  JOURNAL   J Biol Chem 271 (9), 5095-5100 (1996)
   PUBMED   8617788
REFERENCE   3  (residues 1 to 521)
  AUTHORS   Deissler,H., Lottspeich,F. and Rajewsky,M.F.
  TITLE     Affinity purification and cDNA cloning of rat neural
            differentiation and tumor cell surface antigen gp130RB13-6 reveals
            relationship to human and murine PC-1
  JOURNAL   J Biol Chem 270 (17), 9849-9855 (1995)
   PUBMED   7730366
REFERENCE   4  (residues 1 to 521)
  AUTHORS   Murata,J., Lee,H.Y., Clair,T., Krutzsch,H.C., Arestad,A.A.,
            Sobel,M.E., Liotta,L.A. and Stracke,M.L.
  TITLE     cDNA cloning of the human tumor motility-stimulating protein,
            autotaxin, reveals a homology with phosphodiesterases
  JOURNAL   J Biol Chem 269 (48), 30479-30484 (1994)
   PUBMED   7982964
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01663.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Cellulomonas citrea"
                     /db_xref="taxon:1909423"
     Protein         1..521
                     /product="alkaline phosphatase family protein"
                     /calculated_mol_wt=55220
     Region          3..392
                     /region_name="AtaC"
                     /note="c-di-AMP phosphodiesterase AtaC or nucleotide
                     pyrophosphatase, AlkP superfamily [Signal transduction
                     mechanisms]; COG1524"
                     /db_xref="CDD:441133"
ORIGIN      
        1 mqldglsrpv ldqvieagla ptllswlteg shvldpwwas vpsstpasqa gmlhgaadqi
       61 pafrwwdrta grlvvtnhpa daaaverlls dgegllahgg tavstmfsgd aaraylvmsr
      121 trpgprarpd lgpgaaylpf faspfvlmra vtrsmgeivk elyqarrqrv ngvhprigrg
      181 gwyvllravt nvllrdlsts lvaesmvrgd ptvfvdfvdy deiahhagpt rpealraveg
      241 ldgvlatltr valvaprdyq vvvlsdhgqs lgptfeqveg rrlvdtvral msappdagvq
      301 tesaedwgpv nalltpfwrs gtqvavgper tgrqgapvat dlpdvvvaas gnlgmvwfpr
      361 ldhrpaldel qerwpglvag laarpgvgvv vvdsaqglla vgargvhple sgaavegedp
      421 lvrmgpraaq dlaragrlph sgdlllvssv sarghvhafe gqvgshgglg gpqneafvlh
      481 paswvvddal replgderwl vgadalhaql aawqraaglr p
//
LOCUS       WP_235929777             181 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase, partial [Chengkuizengella marina].
ACCESSION   WP_235929777
VERSION     WP_235929777.1
KEYWORDS    RefSeq.
SOURCE      Chengkuizengella marina
  ORGANISM  Chengkuizengella marina
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Chengkuizengella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Chengkuizengella marina"
                     /db_xref="taxon:2507566"
     Protein         1..>181
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          72..>181
                     /region_name="AprE"
                     /note="Serine protease, subtilisin family
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1404"
                     /db_xref="CDD:441014"
ORIGIN      
        1 mnsrkmivli cifsmlfsnl ayanpselle keevtsylig lheevssdef kekklkdkkt
       61 kkiktkkkdm ivaeltelel lelasddqvl fveenaivev tsvdkpkkkd vednqlipwg
      121 iqaigshlah enkfegknin iaildtgiad hpdlkvkdgv sfvedksfde ddhghgthva
      181 g
//
LOCUS       WP_235929780             167 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Chengkuizengella
            marina].
ACCESSION   WP_235929780
VERSION     WP_235929780.1
KEYWORDS    RefSeq.
SOURCE      Chengkuizengella marina
  ORGANISM  Chengkuizengella marina
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Chengkuizengella.
REFERENCE   1  (residues 1 to 167)
  AUTHORS   Yang,W. and Steitz,T.A.
  TITLE     Crystal structure of the site-specific recombinase gamma delta
            resolvase complexed with a 34 bp cleavage site
  JOURNAL   Cell 82 (2), 193-207 (1995)
   PUBMED   7628011
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014814.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02796.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Chengkuizengella marina"
                     /db_xref="taxon:2507566"
     Protein         1..167
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0000150 - DNA strand exchange activity
                     [Evidence IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /calculated_mol_wt=19598
     Region          <72..>158
                     /region_name="SpoIVCA"
                     /note="Site-specific DNA recombinase SpoIVCA/DNA invertase
                     PinE [Replication, recombination and repair]; COG1961"
                     /db_xref="CDD:441564"
ORIGIN      
        1 mafllprlkg dikmepnwqp isnlpligel idgqlmaard qytnlleaqp kphvlddytv
       61 drvihvyteq lifsataefe rkmikdrqre gieiakkkgk ykgrdiqyhs hgkgkdkliy
      121 dkiiqmlsrk esvmeiyret dvsrntiyri kreleykggl awmersr
//
LOCUS       WP_235929887             339 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1702 family protein [Chengkuizengella marina].
ACCESSION   WP_235929887
VERSION     WP_235929887.1
KEYWORDS    RefSeq.
SOURCE      Chengkuizengella marina
  ORGANISM  Chengkuizengella marina
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Chengkuizengella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019624.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08012.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Chengkuizengella marina"
                     /db_xref="taxon:2507566"
     Protein         1..339
                     /product="DUF1702 family protein"
                     /calculated_mol_wt=39732
     Region          <79..>233
                     /region_name="DUF1702"
                     /note="Protein of unknown function (DUF1702); pfam08012"
                     /db_xref="CDD:400392"
ORIGIN      
        1 mvalyivlli lglvfikfli lkiinfrtfh ryidrnkkdf yniffqkils sflyglklgl
       61 qwitipnyvk qkmmkkvkpy yhgfayegys mgiaakltit gqkkyferhv kkvdptniyq
      121 yyvglgwwly klhifnrary qkwiihldpr lapviydgig fsaalerfdh dkhfiasfqv
      181 lkekeqrvly qgigrclwfl kqfdivlald slaalpnkyh kdcasglgla aaysffdqmd
      241 qvfmatnkip tllkaaflqg mgfgfearrl qnpllfknml lalnvnqrke vtalldivda
      301 vkqelyende inqgefyylw idlvrecvek rggkfyegs
//
LOCUS       WP_235929915             754 aa            linear   BCT 02-MAR-2025
DEFINITION  fibronectin type III domain-containing protein [Chengkuizengella
            marina].
ACCESSION   WP_235929915
VERSION     WP_235929915.1
KEYWORDS    RefSeq.
SOURCE      Chengkuizengella marina
  ORGANISM  Chengkuizengella marina
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Chengkuizengella.
REFERENCE   1  (residues 1 to 754)
  AUTHORS   Little,E., Bork,P. and Doolittle,R.F.
  TITLE     Tracing the spread of fibronectin type III domains in bacterial
            glycohydrolases
  JOURNAL   J Mol Evol 39 (6), 631-643 (1994)
   PUBMED   7528812
REFERENCE   2  (residues 1 to 754)
  AUTHORS   Bazan,J.F.
  TITLE     Structural design and molecular evolution of a cytokine receptor
            superfamily
  JOURNAL   Proc Natl Acad Sci U S A 87 (18), 6934-6938 (1990)
   PUBMED   2169613
REFERENCE   3  (residues 1 to 754)
  AUTHORS   Kornblihtt,A.R., Umezawa,K., Vibe-Pedersen,K. and Baralle,F.E.
  TITLE     Primary structure of human fibronectin: differential splicing may
            generate at least 10 polypeptides from a single gene
  JOURNAL   EMBO J 4 (7), 1755-1759 (1985)
   PUBMED   2992939
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012271.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00041.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Chengkuizengella marina"
                     /db_xref="taxon:2507566"
     Protein         1..754
                     /product="fibronectin type III domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=80388
     Region          <37..365
                     /region_name="Chi1"
                     /note="Chitinase [Carbohydrate transport and metabolism];
                     COG3469"
                     /db_xref="CDD:442692"
     Region          <362..708
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          710..751
                     /region_name="ChiA1_BD"
                     /note="chitin-binding domain of Chi A1-like proteins;
                     cd12214"
                     /db_xref="CDD:213177"
ORIGIN      
        1 miligkshkk tiiiifilpl ivtsfqflts nygkaeasta snkvivgywh nfdngstnih
       61 lrnispkydv iqvafaepig gpstgnmgft pynatdsefi sdiddlqaqg kkvlisvgga
      121 ngttdlsteq akltfvstmk niidkygfdg mdidlegssl sigagdtdfk nptstkivnl
      181 ieaineildh ygpdfmltma petayvqggy svyggpwgay lpvihalrdk ltylhvqhyn
      241 tgsmialdgl sysqgtadfh vamaelllqg fpvannqnhf feplrsdqvi iglpaspqaa
      301 gggytspviv qqaldylikg ksfggnyvlr npsgypgfkg lmtwsinwda fnhfefsnsh
      361 rayldsltgq idtqaptvps nlrvtgktts sislawdast dnvgvtgyiv tygntsinvg
      421 slnatisglt pntsytftvk akdaagnvsg asnavtette qsndttppta ptnlqvtskt
      481 stsvdlswsa stddegvtgy tvsyhldsve vtgttvsing ltadttytft viakdaagni
      541 sdeasiqvtt dgpnscpypa wdenteyvgg vrvtyngkvy eskwwtagef pdqsgewgvw
      601 kyistcdggg geidheapsi psnlqvtgks snsvslawda stdnvgvtgy mitydigsve
      661 vtntttting lsaettytft vtakdaagne sdgvsiqatt degdpsgvep weagvsysin
      721 devtyngsiy yciqahtsqi gweppnvpal wglk
//
LOCUS       WP_235929916             241 aa            linear   BCT 02-MAR-2025
DEFINITION  3D domain-containing protein [Chengkuizengella marina].
ACCESSION   WP_235929916
VERSION     WP_235929916.1
KEYWORDS    RefSeq.
SOURCE      Chengkuizengella marina
  ORGANISM  Chengkuizengella marina
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Chengkuizengella.
REFERENCE   1  (residues 1 to 241)
  AUTHORS   van Straaten,K.E., Dijkstra,B.W., Vollmer,W. and Thunnissen,A.M.
  TITLE     Crystal structure of MltA from Escherichia coli reveals a unique
            lytic transglycosylase fold
  JOURNAL   J Mol Biol 352 (5), 1068-1080 (2005)
   PUBMED   16139297
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06725.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Chengkuizengella marina"
                     /db_xref="taxon:2507566"
     Protein         1..241
                     /product="3D domain-containing protein"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /calculated_mol_wt=27231
     Region          <27..97
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          116..221
                     /region_name="DPBB_YuiC-like"
                     /note="double-psi beta-barrel fold of YuiC subfamily
                     proteins; cd22786"
                     /db_xref="CDD:439263"
     Site            order(116..125,127,147,149..150,152,158,160,168..177,
                     179..180,183,201,203,207,210..221)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:439263"
     Site            order(143..146,151,186..189)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:439263"
ORIGIN      
        1 mffknfrvkm isilflpmia llttssitpq lqqvesdevl eyedsynnvs vintqldsts
       61 styqkdfile eikkmkqeis krkrekeiqn anikiknekl snsvailsen qirkqyrave
      121 viatgyyagv dstgktpdhp eygitysgvk vrrmpesvst iaadlnlfpl gtvlyipgyg
      181 ygivadigsa ikgnvidlyf ntkedvyklw gkkkldvfii eegngritea ilqqkidtfr
      241 s
//
LOCUS       WP_235929942             547 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Chengkuizengella
            marina].
ACCESSION   WP_235929942
VERSION     WP_235929942.1
KEYWORDS    RefSeq.
SOURCE      Chengkuizengella marina
  ORGANISM  Chengkuizengella marina
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Chengkuizengella.
REFERENCE   1  (residues 1 to 547)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Chengkuizengella marina"
                     /db_xref="taxon:2507566"
     Protein         <1..547
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..103
                     /region_name="PRK05691"
                     /note="peptide synthase; Validated"
                     /db_xref="CDD:235564"
     Region          108..518
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation (C) domain of non-ribosomal
                     peptide synthetases(NRPSs) and similar domains including
                     the C-domain of SgcC5, a free-standing NRPS with both
                     ester- and amide- bond forming activity; cd19531"
                     /db_xref="CDD:380454"
ORIGIN      
        1 ktlpkpdlei dtdvenelpr neiekrlagi wsevlkveqi gindnffyig ghslkvstls
       61 yrihkefnta mpiwkifqls tlkqqaeyiq gasknmysdi ekapkrdyyq asptqkrlfi
      121 lnqfeesgte ynmpviikld gdldtgkied ifrklikrhe virtsfeiid gqiiqkihee
      181 idftieyikg dnkneqniid kfirpfdlsk ppllrvaild stednnilmv dmhhiisdds
      241 smkllvaefi qlyndeilep lriqykdyaa wqnqmmysek mhaerdywle vlngeiqvid
      301 lpidmkrqlv ksytgetlsf mvnpeiairl eeiasregat vymlffaaft vllskysgqn
      361 diiigtplsg rthdnlegim gmfvntlplr sypndkktfv eylhevkvgt vsmienqnyp
      421 ldillddlki kreagrnplf dvlftwqeeq inqwkiegat yrvepyynkv akfdltlkgy
      481 ksesgikcdf eyntqlfkve tielmcerfs tllesisaks taqiydldwl tkfekqlavv
      541 edinfnf
//
LOCUS       WP_235929988             384 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Chengkuizengella
            marina].
ACCESSION   WP_235929988
VERSION     WP_235929988.1
KEYWORDS    RefSeq.
SOURCE      Chengkuizengella marina
  ORGANISM  Chengkuizengella marina
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Chengkuizengella.
REFERENCE   1  (residues 1 to 384)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Chengkuizengella marina"
                     /db_xref="taxon:2507566"
     Protein         <1..>384
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..384
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation (C) domain of non-ribosomal
                     peptide synthetases(NRPSs) and similar domains including
                     the C-domain of SgcC5, a free-standing NRPS with both
                     ester- and amide- bond forming activity; cd19531"
                     /db_xref="CDD:380454"
ORIGIN      
        1 yrlqgalnvv aleqsfreiv rrheslrtif qkdeneeavq vilpepdfil dvvnmeesge
       61 tseqqqpvqi eaeakrpfdl aagplfratl yrlgeqehgl llnmhhivsd gwsqgvliqe
      121 wktlytafvn qmpsplaels iqyadyahwq rewlqgealq eqltywktql ggelpilelp
      181 ydhpraavqr yegdterftl spaltkkltq lsqqtgstlf mtllaafqtf mmrysgqedv
      241 ivgtpianrt qaetekligf fvntlalrtn legnpsfnel lervrevtlg ayghqdipfe
      301 klveelqper dqsrsplfqv mfvlqnapee klelpgvqvh vegvntreak fdltlsmaes
      361 eqgligamny ntglfdaati armv
//
LOCUS       WP_235930000             238 aa            linear   BCT 02-MAR-2025
DEFINITION  sterol desaturase family protein [Sulfitobacter sediminilitoris].
ACCESSION   WP_235930000
VERSION     WP_235930000.1
KEYWORDS    RefSeq.
SOURCE      Sulfitobacter sediminilitoris
  ORGANISM  Sulfitobacter sediminilitoris
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Sulfitobacter.
REFERENCE   1  (residues 1 to 238)
  AUTHORS   Zhu,G., Koszelak-Rosenblum,M., Connelly,S.M., Dumont,M.E. and
            Malkowski,M.G.
  TITLE     The Crystal Structure of an Integral Membrane Fatty Acid
            alpha-Hydroxylase
  JOURNAL   J Biol Chem 290 (50), 29820-29833 (2015)
   PUBMED   26515067
REFERENCE   2  (residues 1 to 238)
  AUTHORS   Lagarde,D. and Vermaas,W.
  TITLE     The zeaxanthin biosynthesis enzyme beta-carotene hydroxylase is
            involved in myxoxanthophyll synthesis in Synechocystis sp. PCC 6803
  JOURNAL   FEBS Lett 454 (3), 247-251 (1999)
   PUBMED   10431816
REFERENCE   3  (residues 1 to 238)
  AUTHORS   Husselstein,T., Schaller,H., Gachotte,D. and Benveniste,P.
  TITLE     Delta7-sterol-C5-desaturase: molecular characterization and
            functional expression of wild-type and mutant alleles
  JOURNAL   Plant Mol Biol 39 (5), 891-906 (1999)
   PUBMED   10344195
REFERENCE   4  (residues 1 to 238)
  AUTHORS   Mitchell,A.G. and Martin,C.E.
  TITLE     Fah1p, a Saccharomyces cerevisiae cytochrome b5 fusion protein, and
            its Arabidopsis thaliana homolog that lacks the cytochrome b5
            domain both function in the alpha-hydroxylation of
            sphingolipid-associated very long chain fatty acids
  JOURNAL   J Biol Chem 272 (45), 28281-28288 (1997)
   PUBMED   9353282
REFERENCE   5  (residues 1 to 238)
  AUTHORS   Bard,M., Bruner,D.A., Pierson,C.A., Lees,N.D., Biermann,B.,
            Frye,L., Koegel,C. and Barbuch,R.
  TITLE     Cloning and characterization of ERG25, the Saccharomyces cerevisiae
            gene encoding C-4 sterol methyl oxidase
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 186-190 (1996)
   PUBMED   8552601
REFERENCE   6  (residues 1 to 238)
  AUTHORS   Aarts,M.G., Keijzer,C.J., Stiekema,W.J. and Pereira,A.
  TITLE     Molecular characterization of the CER1 gene of arabidopsis involved
            in epicuticular wax biosynthesis and pollen fertility
  JOURNAL   Plant Cell 7 (12), 2115-2127 (1995)
   PUBMED   8718622
REFERENCE   7  (residues 1 to 238)
  AUTHORS   Arthington,B.A., Bennett,L.G., Skatrud,P.L., Guynn,C.J.,
            Barbuch,R.J., Ulbright,C.E. and Bard,M.
  TITLE     Cloning, disruption and sequence of the gene encoding yeast C-5
            sterol desaturase
  JOURNAL   Gene 102 (1), 39-44 (1991)
   PUBMED   1864507
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016041.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04116.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Sulfitobacter sediminilitoris"
                     /db_xref="taxon:2698830"
     Protein         1..238
                     /product="sterol desaturase family protein"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_process="GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=26623
     Region          <31..183
                     /region_name="FA_hydroxylase"
                     /note="Fatty acid hydroxylase; cl01132"
                     /db_xref="CDD:412761"
ORIGIN      
        1 marhpsvvim gvvcvgafva lalagpwwgw llvplgigaq mlneynlhry ifhlkpprrq
       61 wafdllyqah yghhdfptnt klffvpiwia lpmlaantll vwaiaallgv aqahwvaiai
      121 vpaggvamfm vyewfhmtah lnlpksaiar rvtrlhnqhh frdfskwfhv spggeiidrv
      181 mgtdidaaal kqqqriefir tlgmtpddpr llaartrfap kyglsdkeva ragivpaa
//
LOCUS       WP_235930045             260 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3658 domain-containing protein [Craterilacuibacter sinensis].
ACCESSION   WP_235930045
VERSION     WP_235930045.1
KEYWORDS    RefSeq.
SOURCE      Craterilacuibacter sinensis
  ORGANISM  Craterilacuibacter sinensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Craterilacuibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023812.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12395.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Craterilacuibacter sinensis"
                     /db_xref="taxon:2686017"
     Protein         1..260
                     /product="DUF3658 domain-containing protein"
                     /calculated_mol_wt=28498
     Region          2..113
                     /region_name="DUF1835"
                     /note="Domain of unknown function (DUF1835); pfam08874"
                     /db_xref="CDD:430278"
     Region          153..248
                     /region_name="DUF3658"
                     /note="Protein of unknown function; pfam12395"
                     /db_xref="CDD:432523"
ORIGIN      
        1 mlhvvaggha adslqallad aqlagavldw pdelsngpla dadqidpqlr iahwqrllra
       61 yqppqpdwde awqrqraaac rtllqaweqs mpltlwlgnh agetlllrml aaqcpeqcel
      121 wvvdvslhld tprpglwavg mysaaelapl agdarllslp erqmlaeewg dwqragdcvr
      181 evqagrlqgr plscydnvll dglaahgcvg aarlvdesmr riehtfvsdi flfwrvlela
      241 eagtlrlqtg agqapvlaai
//
LOCUS       WP_235929953             186 aa            linear   BCT 02-MAR-2025
DEFINITION  putative phage tail protein [Chengkuizengella marina].
ACCESSION   WP_235929953
VERSION     WP_235929953.1
KEYWORDS    RefSeq.
SOURCE      Chengkuizengella marina
  ORGANISM  Chengkuizengella marina
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Chengkuizengella.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Morgan,G.J., Hatfull,G.F., Casjens,S. and Hendrix,R.W.
  TITLE     Bacteriophage Mu genome sequence: analysis and comparison with
            Mu-like prophages in Haemophilus, Neisseria and Deinococcus
  JOURNAL   J Mol Biol 317 (3), 337-359 (2002)
   PUBMED   11922669
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021583.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10076.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Chengkuizengella marina"
                     /db_xref="taxon:2507566"
     Protein         1..186
                     /product="putative phage tail protein"
                     /calculated_mol_wt=21714
     Region          1..153
                     /region_name="Phage_Mu_Gp48"
                     /note="Bacteriophage Mu-like, Gp48; cl01542"
                     /db_xref="CDD:470245"
ORIGIN      
        1 mmnhlpifmr kskvflelfn aeeqefnqln vvredlqsql svdtatwgld iyekelkikt
       61 dktktfeerr svikskwrgf gkadskliql vaesfmngqv evryenpnge pnppysiivk
      121 figtrgvptn ledlqnliee ikpahkgief eftyitwnel ergtftwndi dsmdltrnef
      181 etlkve
//
LOCUS       WP_235930116              70 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1272 domain-containing protein [Sulfitobacter sediminilitoris].
ACCESSION   WP_235930116
VERSION     WP_235930116.1
KEYWORDS    RefSeq.
SOURCE      Sulfitobacter sediminilitoris
  ORGANISM  Sulfitobacter sediminilitoris
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Sulfitobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018599.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06906.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Sulfitobacter sediminilitoris"
                     /db_xref="taxon:2698830"
     Protein         1..70
                     /product="DUF1272 domain-containing protein"
                     /calculated_mol_wt=7547
     Region          3..>38
                     /region_name="DUF1272"
                     /note="Protein of unknown function (DUF1272); cl19740"
                     /db_xref="CDD:473200"
ORIGIN      
        1 msdkdlpqea keariciyec tffaervdnv lknvcpycar vscrvrsgpe qtagpaladn
       61 iscqapraav
//
LOCUS       WP_235930215             218 aa            linear   BCT 02-MAR-2025
DEFINITION  SlyX family protein [Craterilacuibacter sinensis].
ACCESSION   WP_235930215
VERSION     WP_235930215.1
KEYWORDS    RefSeq.
SOURCE      Craterilacuibacter sinensis
  ORGANISM  Craterilacuibacter sinensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Craterilacuibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016028.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04102.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Craterilacuibacter sinensis"
                     /db_xref="taxon:2686017"
     Protein         1..218
                     /product="SlyX family protein"
                     /calculated_mol_wt=24737
     Region          153..218
                     /region_name="SlyX"
                     /note="Uncharacterized coiled-coil protein SlyX (sensitive
                     to lysis X) [Function unknown]; COG2900"
                     /db_xref="CDD:442145"
ORIGIN      
        1 mnipapvala trlapllngl dwgiggstll yhlgleanpq dldllvtpeh faqahlrlae
       61 lfneearpah prhiaqhfar fvsqdgsaid lmagicvhgq ekktgwdfnp aqvdiehglp
      121 wmraedwlel yslfqrpfrv qqlqnwlnar daeqrcgele irlaflddtv dalsstlarq
      181 qheldllqeq lrllyrqsar gsgeneersl rdeipphy
//
LOCUS       WP_235930267             375 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6456 domain-containing protein [Sulfitobacter sediminilitoris].
ACCESSION   WP_235930267
VERSION     WP_235930267.1
KEYWORDS    RefSeq.
SOURCE      Sulfitobacter sediminilitoris
  ORGANISM  Sulfitobacter sediminilitoris
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Sulfitobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040428.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20057.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Sulfitobacter sediminilitoris"
                     /db_xref="taxon:2698830"
     Protein         1..375
                     /product="DUF6456 domain-containing protein"
                     /calculated_mol_wt=39939
     Region          <32..57
                     /region_name="HTH_38"
                     /note="Helix-turn-helix domain; pfam13936"
                     /db_xref="CDD:433591"
     Region          228..365
                     /region_name="DUF6456"
                     /note="Domain of unknown function (DUF6456); pfam20057"
                     /db_xref="CDD:437889"
ORIGIN      
        1 mtttrdmmgf egpggmpgwv pagalhyiah tekgqpiral arqagchast ilrqirkvem
       61 rrddplvdaa lrklgaastp skpqktepkq eitkpmtskp qitmpdeetl areaarvlrr
      121 lcetgavlav aaeldkavvv rdmpggtsar tavvdapiaq amalkdwitp antgriiryh
      181 itssgrsalt gfldrfgvpq daaskavqpg eadaadrllg dgatnarary algesplsal
      241 arrrdrdgtp flaeqlvhag erlredfela qmdgsvtqnw dhfltagiqs gstnggtctg
      301 apaaargrvq aalqnlgpgl sdvvlrcccy legletaekr lgwsarsgki vlrialirlk
      361 rhydetvgpg gplig
//
LOCUS       WP_235930293             261 aa            linear   BCT 02-MAR-2025
DEFINITION  Hint domain-containing protein [Sulfitobacter sediminilitoris].
ACCESSION   WP_235930293
VERSION     WP_235930293.1
KEYWORDS    RefSeq.
SOURCE      Sulfitobacter sediminilitoris
  ORGANISM  Sulfitobacter sediminilitoris
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Sulfitobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13403.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Sulfitobacter sediminilitoris"
                     /db_xref="taxon:2698830"
     Protein         1..261
                     /product="Hint domain-containing protein"
                     /calculated_mol_wt=27945
     Region          73..216
                     /region_name="Hint"
                     /note="Hedgehog/Intein domain, found in Hedgehog proteins
                     as well as proteins which contain inteins and undergo
                     protein splicing (e.g. DnaB, RIR1-2, GyrA and Pol). In
                     protein splicing an intervening polypeptide sequence - the
                     intein - is excised from a protein; cl22434"
                     /db_xref="CDD:451395"
ORIGIN      
        1 mtltasmgqr pttptanlrg ytpsapsarg vnaapqmpmr syevaalrad gslyigqdka
       61 paiplfesaf safargtlia tpqgdvaied lqpgdmvnts tgeparliwi gsssfvpada
      121 grrvplirim pdtfgrgrps sfltlgpsar ilhtphrlrs eageqrlltp vrefvdgvnv
      181 ievvpptpvr lfhfcldrha tisaggieme tfhpganati svshnlrdrf mgmfprighm
      241 tdfgplahpr aaeartnada i
//
LOCUS       WP_235930295             143 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Sulfitobacter sediminilitoris].
ACCESSION   WP_235930295
VERSION     WP_235930295.1
KEYWORDS    RefSeq.
SOURCE      Sulfitobacter sediminilitoris
  ORGANISM  Sulfitobacter sediminilitoris
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Sulfitobacter.
REFERENCE   1  (residues 1 to 143)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Sulfitobacter sediminilitoris"
                     /db_xref="taxon:2698830"
     Protein         1..143
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=15814
     Region          11..126
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(113..116,118)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 mkdtethpig tlmliddsei dqmiyrriai ksglvrdllq fmdavkafey lsdldnqrpd
       61 lilldinmpg mdgfefleaa teklgaelcp ivvmlttsln pkdeeramsf svvreflskp
      121 ltlrqlqalg avvgakgpnm lgq
//
LOCUS       WP_235930371             328 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaJ C-terminal domain-containing protein [Sulfitobacter
            sediminilitoris].
ACCESSION   WP_235930371
VERSION     WP_235930371.1
KEYWORDS    RefSeq.
SOURCE      Sulfitobacter sediminilitoris
  ORGANISM  Sulfitobacter sediminilitoris
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Sulfitobacter.
REFERENCE   1  (residues 1 to 328)
  AUTHORS   Silva,J.C., Borges,J.C., Cyr,D.M., Ramos,C.H. and Torriani,I.L.
  TITLE     Central domain deletions affect the SAXS solution structure and
            function of yeast Hsp40 proteins Sis1 and Ydj1
  JOURNAL   BMC Struct Biol 11, 40 (2011)
   PUBMED   22011374
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 328)
  AUTHORS   Li,J., Qian,X. and Sha,B.
  TITLE     The crystal structure of the yeast Hsp40 Ydj1 complexed with its
            peptide substrate
  JOURNAL   Structure 11 (12), 1475-1483 (2003)
   PUBMED   14656432
REFERENCE   3  (residues 1 to 328)
  AUTHORS   Kelley,W.L.
  TITLE     The J-domain family and the recruitment of chaperone power
  JOURNAL   Trends Biochem Sci 23 (6), 222-227 (1998)
   PUBMED   9644977
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013705.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01556.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Sulfitobacter sediminilitoris"
                     /db_xref="taxon:2698830"
     Protein         1..328
                     /product="DnaJ C-terminal domain-containing protein"
                     /calculated_mol_wt=35384
     Region          19..317
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
ORIGIN      
        1 mafhfrakil etyamefkdy yeilgvkrda sadeikkafr kgarkyhpdv ntdadaevkf
       61 kdvneayevl kdperraayd qlgktpppga ggagfqpppg wdggfeftga apeddsvfsd
      121 ffeslfrrgd arasrggmga grgadthakv eisiedayrg asrtlrirap vvnpdgtvtv
      181 kdrniavhip kgvqegqhir lagqgtpslg ggsagdlfle isfaahpvyr asgrdlhldl
      241 piapweaalg ghvvmptpag kvelripkna rsgqkmrlkg kglpgkppgd iyatlkivnp
      301 nvttdegrrf fedmakampf dpranlgg
//
LOCUS       WP_235930406             489 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF427 domain-containing protein [Sulfitobacter sediminilitoris].
ACCESSION   WP_235930406
VERSION     WP_235930406.1
KEYWORDS    RefSeq.
SOURCE      Sulfitobacter sediminilitoris
  ORGANISM  Sulfitobacter sediminilitoris
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Sulfitobacter.
REFERENCE   1  (residues 1 to 489)
  AUTHORS   Lupas,A.N., Zhu,H. and Korycinski,M.
  TITLE     The thalidomide-binding domain of cereblon defines the CULT domain
            family and is a new member of the beta-tent fold
  JOURNAL   PLoS Comput Biol 11 (1), e1004023 (2015)
   PUBMED   25569776
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016162.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04248.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Sulfitobacter sediminilitoris"
                     /db_xref="taxon:2698830"
     Protein         1..489
                     /product="DUF427 domain-containing protein"
                     /calculated_mol_wt=53027
     Region          3..98
                     /region_name="COG2343"
                     /note="Uncharacterized conserved protein, DUF427 family
                     [Function unknown]"
                     /db_xref="CDD:441912"
     Region          80..480
                     /region_name="AcyC"
                     /note="Adenylate cyclase, class 3 [Signal transduction
                     mechanisms]; COG2114"
                     /db_xref="CDD:441717"
ORIGIN      
        1 mrgdtllaks rnarvafetr lapvvyfppe dvvatlgelt dlktfcpfkg taryrdlvlp
       61 ggpvpnavwt yanalpesar ieghlafmpg vadqirieag pierpkyasa sgpmidwllr
      121 eagfiptpea ltkalgeklr ehgvqvtris imiwslhpli agknyvwdha kadvstfaps
      181 yeihdhpafv nsplrhvsdg lggvrqrlgs dyaensfpim edlrdqgatd yvamplpfsd
      241 grvnvltvtg dhpdgfstan lglifecifv isrffevftq renaqsllet yvgkragarv
      301 lggeirrgdg deidaaimfc dlrhstrlee elsrgtylel lnhffettss vvhehggevl
      361 kfigdailav fpagedakaa catalasare tveelrshpn cegsvgvafg rvtygnvgsk
      421 erldftvigq aaniaarlcd qgrhsghaiv vtdevlgddq daddlgglvl rnvgapvrch
      481 giginhtqt
//
LOCUS       WP_235930043             224 aa            linear   BCT 02-MAR-2025
DEFINITION  SURF1 family cytochrome oxidase biogenesis protein
            [Craterilacuibacter sinensis].
ACCESSION   WP_235930043
VERSION     WP_235930043.1
KEYWORDS    RefSeq.
SOURCE      Craterilacuibacter sinensis
  ORGANISM  Craterilacuibacter sinensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Craterilacuibacter.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Hannappel,A., Bundschuh,F.A. and Ludwig,B.
  TITLE     Role of Surf1 in heme recruitment for bacterial COX biogenesis
  JOURNAL   Biochim Biophys Acta 1817 (6), 928-937 (2012)
   PUBMED   21945856
REFERENCE   2  (residues 1 to 224)
  AUTHORS   Stettner,G.M., Viscomi,C., Zeviani,M., Wilichowski,E. and
            Dutschmann,M.
  TITLE     Hypoxic and hypercapnic challenges unveil respiratory vulnerability
            of Surf1 knockout mice, an animal model of Leigh syndrome
  JOURNAL   Mitochondrion 11 (3), 413-420 (2011)
   PUBMED   21167962
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014193.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02104.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Craterilacuibacter sinensis"
                     /db_xref="taxon:2686017"
     Protein         1..224
                     /product="SURF1 family cytochrome oxidase biogenesis
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=24400
     Region          5..191
                     /region_name="SURF1"
                     /note="SURF1 superfamily. Surf1/Shy1 has been implicated
                     in the posttranslational steps of the biogenesis of the
                     mitochondrially-encoded Cox1 subunit of cytochrome c
                     oxidase (complex IV). Cytochrome c oxidase (complex IV),
                     the terminal electron-transferring...; cl01321"
                     /db_xref="CDD:470159"
ORIGIN      
        1 mktsviigcc llpfvlslwq wqrgvtrsae laaveaaalq spqamttadr vaapdrrrvr
       61 vegrvvgdvl lwqgtglggr pdyrvwlpls lsdgsmvmvd agriapdgrl pvlphrlsgh
      121 grwqpwpqll tlsgarlghk gvvdapsrev lesrygaslr agmvvlevpl agllaspfkp
      181 afdpqrhfay alqwlllgll llasawrllk pgrrshtlam eevq
//
LOCUS       WP_235930456             179 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: 4Fe-4S dicluster domain-containing protein
            [Eisenbergiella].
ACCESSION   WP_235930456
VERSION     WP_235930456.1
KEYWORDS    RefSeq.
SOURCE      Eisenbergiella
  ORGANISM  Eisenbergiella
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024247.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12838.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Eisenbergiella"
                     /db_xref="taxon:1432051"
     Protein         1..179
                     /product="4Fe-4S dicluster domain-containing protein"
                     /calculated_mol_wt=18963
     Region          11..>96
                     /region_name="PRK05888"
                     /note="NADH-quinone oxidoreductase subunit NuoI"
                     /db_xref="CDD:235637"
     Region          <79..>118
                     /region_name="PRK06273"
                     /note="ferredoxin; Provisional"
                     /db_xref="CDD:235764"
ORIGIN      
        1 mknmntmkft gtvlknlfsk patrpypeqp reypdrtrgh veididtcvl cglcsrkcpt
       61 gaitvdragk tweiqrfgci qcgccvevcp kkclsmkqty tqpgdvkkte sflktnmpdp
      121 vvkpvvkpaa paadayaskp aaqanaapvn taqansatvn taqanaapaa naseaqgka
//
LOCUS       WP_235930573             946 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: glycoside hydrolase family 2 TIM barrel-domain
            containing protein [Eisenbergiella].
ACCESSION   WP_235930573
VERSION     WP_235930573.1
KEYWORDS    RefSeq.
SOURCE      Eisenbergiella
  ORGANISM  Eisenbergiella
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae.
REFERENCE   1  (residues 1 to 946)
  AUTHORS   Jacobson,R.H., Zhang,X.J., DuBose,R.F. and Matthews,B.W.
  TITLE     Three-dimensional structure of beta-galactosidase from E. coli
  JOURNAL   Nature 369 (6483), 761-766 (1994)
   PUBMED   8008071
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02836.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..946
                     /organism="Eisenbergiella"
                     /db_xref="taxon:1432051"
     Protein         1..946
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=109354
     Region          3..946
                     /region_name="Bgal_small_N"
                     /note="Beta galactosidase small chain; cl46900"
                     /db_xref="CDD:481240"
ORIGIN      
        1 mmmrfyeniq ftsesrkspr syyipggcsq ylllngewef ayfnrdidvp ekieqwdtit
       61 vpscwqlhgy enpnytniny pypcdppyvp tdnpcgvyer efelekkwgk vyylfegvss
      121 caylyindny vgftqgshlq aefditdyvk egtnkvtvkv lkwccgsyle dqdffrfngi
      181 frdtyilqrp ighmedvqii pnektihvvt egicevsiaf egkelvqtqm eneftyeven
      241 pvlwnaekpa lydvvlkrng eevkfrigmr kievssqyel lingvsvklh gvnhhdthqy
      301 ngwcqtdeel rkdlllmkel nincvrtahy pptpkfmemc deiglyvice tdiethgflr
      361 rlpnveyhfd mesndwpast lewqgehier mermvetfkn yasiimwstg nesghgvnhv
      421 amirwtrsrd nsrlihceda srkeqihnad vysrmyisfe elekaavtnd icmpvflcey
      481 shamgngpgd vyeyneifdk ypkliggciw ewadhvvmvd gvakyggdfe gelthdgnfc
      541 cdglvfadrt fkagtmeaka afqpirtsye egvlrvfnrl dfsnlneydf tywvevdgvk
      601 keevtlkldv aphesvalei pyeettcryg vylntrltka ekecaqtqhe lpykkveetv
      661 reksltlted eyhiyasgeg fqyvfsklyg gftsmiidgv eqlagtskis mfrattdnda
      721 kmrpfwanvn iwqgenldca ftkiyecdic ddkillkgsl agisrkpvll ydmeikitva
      781 gtveigfngk iredatwmpr lgmeftlteq asafsyygrg pwenycdmch casvgtyksd
      841 vdseyvnyvf pqehgnhmnv krltlgnlef qseddfecnv skytiedldq akhtdelhad
      901 gnvhvridyk vsglgtascg pdlsekyrfs ekevsckfki kkltnk
//
LOCUS       WP_235930545             289 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ATP-binding cassette domain-containing protein
            [Eisenbergiella].
ACCESSION   WP_235930545
VERSION     WP_235930545.1
KEYWORDS    RefSeq.
SOURCE      Eisenbergiella
  ORGANISM  Eisenbergiella
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae.
REFERENCE   1  (residues 1 to 289)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 289)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 289)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 289)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Eisenbergiella"
                     /db_xref="taxon:1432051"
     Protein         1..289
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=32938
     Region          1..>285
                     /region_name="UvrA"
                     /note="Excinuclease UvrABC ATPase subunit [Replication,
                     recombination and repair]; COG0178"
                     /db_xref="CDD:439948"
ORIGIN      
        1 msdisiigaa egnlknisld iprnklvvft glsgsgkstl lidvlynecq rqyleamafq
       61 giqkpkverv rgaspaivit qtdanrnprs tvgtmsdiyt dlrmvyeklg rihaikkert
      121 vdeklsledg avkywekqyg kfqlsvlrqa fshygvpvep gtlypilwrr ladkngdvkq
      181 ledyfevkec pdcrgerlce lsrsvtvqgl rlpqlslfsl drlyawvrel hasldekqme
      241 fvrdyltdme tkisrflkvg lgylsldrqt itlsggelqr lhwirrsqg
//
LOCUS       WP_235930593             143 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF4956 domain-containing protein [Eisenbergiella].
ACCESSION   WP_235930593
VERSION     WP_235930593.1
KEYWORDS    RefSeq.
SOURCE      Eisenbergiella
  ORGANISM  Eisenbergiella
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027640.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16316.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Eisenbergiella"
                     /db_xref="taxon:1432051"
     Protein         1..143
                     /product="DUF4956 domain-containing protein"
                     /calculated_mol_wt=15812
     Region          28..>138
                     /region_name="MgtC"
                     /note="MgtC family; cl15893"
                     /db_xref="CDD:472842"
ORIGIN      
        1 msakdiikks vlegfsmems vyhiifillv tvvlsmyify iyrlnshssf ysrdfnktla
       61 impvltaaiv lalqssivis lgmvgalsiv rfrnaikspm dllflfwsis tgiicgagly
      121 vlaivtcliv tilsflldfi kmp
//
LOCUS       WP_235930679             480 aa            linear   BCT 02-MAR-2025
DEFINITION  TolC family protein [Sulfitobacter sediminilitoris].
ACCESSION   WP_235930679
VERSION     WP_235930679.1
KEYWORDS    RefSeq.
SOURCE      Sulfitobacter sediminilitoris
  ORGANISM  Sulfitobacter sediminilitoris
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Sulfitobacter.
REFERENCE   1  (residues 1 to 480)
  AUTHORS   Johnson,J.M. and Church,G.M.
  TITLE     Alignment and structure prediction of divergent protein families:
            periplasmic and outer membrane proteins of bacterial efflux pumps
  JOURNAL   J Mol Biol 287 (3), 695-715 (1999)
   PUBMED   10092468
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02321.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Sulfitobacter sediminilitoris"
                     /db_xref="taxon:2698830"
     Protein         1..480
                     /product="TolC family protein"
                     /GO_function="GO:0015562 - efflux transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=53310
     Region          43..453
                     /region_name="tolC"
                     /note="outer membrane channel protein; Reviewed; cl30340"
                     /db_xref="CDD:357216"
ORIGIN      
        1 mylkdslnls ffgienviig lfrqtiflvl lgllvtfspv stsaetlqsa vrnavtnnpa
       61 qqaanadvra tlfemlelrg eyqpevflfg evggqivdnp stlsaaennt fketaqigig
      121 veytlfdgyr renlvyrnat rldasilrql datetlalna veayidvirl relsrlasen
      181 igrheeialq irdlvqlgri pssdgflvdd riaaardakl gidqslanai aryervvgrs
      241 psgamnvpgv knvpknlral qneavrrsfr vriadklare aqfdagikea drkprvtlna
      301 gltygknrdg nlgnrsdafv gvrmnwtlyn grrpaqsagl qerirkaeld rrvaadevre
      361 laartwnaya knaersgvlg kqlranimiv rqyrdeltaa krslidvlea eraafnarfq
      421 kissdaaltf skyqllatrs qltahfglae tnavfevnye erarqsprsa vfntvvdplk
//
LOCUS       WP_235930791             387 aa            linear   BCT 02-MAR-2025
DEFINITION  Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal
            domain [Eisenbergiella porci].
ACCESSION   WP_235930791
VERSION     WP_235930791.1
KEYWORDS    RefSeq.
SOURCE      Eisenbergiella porci
  ORGANISM  Eisenbergiella porci
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Eisenbergiella.
REFERENCE   1  (residues 1 to 387)
  AUTHORS   Baumer,S., Ide,T., Jacobi,C., Johann,A., Gottschalk,G. and
            Deppenmeier,U.
  TITLE     The F420H2 dehydrogenase from Methanosarcina mazei is a
            Redox-driven proton pump closely related to NADH dehydrogenases
  JOURNAL   J Biol Chem 275 (24), 17968-17973 (2000)
   PUBMED   10751389
REFERENCE   2  (residues 1 to 387)
  AUTHORS   Alex,L.A., Reeve,J.N., Orme-Johnson,W.H. and Walsh,C.T.
  TITLE     Cloning, sequence determination, and expression of the genes
            encoding the subunits of the nickel-containing
            8-hydroxy-5-deazaflavin reducing hydrogenase from Methanobacterium
            thermoautotrophicum delta H
  JOURNAL   Biochemistry 29 (31), 7237-7244 (1990)
   PUBMED   2207102
REFERENCE   3  (residues 1 to 387)
  AUTHORS   Shuber,A.P., Orr,E.C., Recny,M.A., Schendel,P.F., May,H.D.,
            Schauer,N.L. and Ferry,J.G.
  TITLE     Cloning, expression, and nucleotide sequence of the formate
            dehydrogenase genes from Methanobacterium formicicum
  JOURNAL   J Biol Chem 261 (28), 12942-12947 (1986)
   PUBMED   3531194
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016328.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04432.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Eisenbergiella porci"
                     /db_xref="taxon:2652274"
     Protein         1..387
                     /product="Coenzyme F420 hydrogenase/dehydrogenase, beta
                     subunit C-terminal domain"
                     /calculated_mol_wt=43728
     Region          15..>61
                     /region_name="NuoI"
                     /note="Formate hydrogenlyase subunit 6/NADH:ubiquinone
                     oxidoreductase 23 kD subunit (chain I) [Energy production
                     and conversion]; COG1143"
                     /db_xref="CDD:440758"
     Region          78..304
                     /region_name="FrhB"
                     /note="Coenzyme F420-reducing hydrogenase, beta subunit
                     [Energy production and conversion]; COG1035"
                     /db_xref="CDD:440658"
ORIGIN      
        1 mlkgsdqvmk tvckkdqcag cmacvdicsk kaiqvvdsiv aynaiidenk cincdacqki
       61 cqenkppvql kpidwkegwa neqeirekas sggvataiel afvnyggtvc scslengdfc
      121 fsfaqtkkev ekftgskyvk snptgiyrki ldklkkgekv lfvglpcqva avknfvgnre
      181 nlytidlich gtpspkiler flndyqlkld narnikyrvk skfylesdqk rftvptvvdn
      241 ylmtfldsas ytencyecky akpervsdit lgdswgsela ediqskgvsl ilcqnekgka
      301 lleqtdlhll dvdleraikw nhqlrrpsvk pkqrnkllka issgkkfkrc iwisypkrct
      361 knliktilyk tkimrggask ilhslyr
//
LOCUS       WP_235930812             468 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [Eisenbergiella].
ACCESSION   WP_235930812
VERSION     WP_235930812.1
KEYWORDS    RefSeq.
SOURCE      Eisenbergiella
  ORGANISM  Eisenbergiella
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Eisenbergiella"
                     /db_xref="taxon:1432051"
     Protein         1..468
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=52326
     Region          37..462
                     /region_name="MelB"
                     /note="Na+/melibiose symporter or related transporter
                     [Carbohydrate transport and metabolism]; COG2211"
                     /db_xref="CDD:441813"
ORIGIN      
        1 msklildfnw llghlrriyf malpeneedy eksrgyyiag dsatqtiaql aggtflvslm
       61 lsvnipdaai gvitsmasfa alfqlftmqk inrlkkrklf vslcvlqklf laliffiplm
      121 slenhaaqfl iitgyffaqa ctqigtpatq dwiatlvpme lrgryfsrkd aiavfvtvtt
      181 mllagvimdk tagplqhigf lingslilil vilnfwafsc mkeprharln afgqemhghl
      241 arknkqdapa rqkgvlktei leafrnpdfr kafwtnilwl tafyvsspfn tsyqikdlsl
      301 pftfimvvgf fgnliriait pmvgrmgdry gmaciykysl vgillnfafm alsvpsnayp
      361 mtiaatifsa igwsfagigl fgiqleline ekrtlqlsil ssiggvygfl vsflagrlls
      421 hlqhtplila grplyaqqit ntlgvlflta lilytkfvvq kretqlhp
//
LOCUS       WP_235930834              99 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: uroporphyrinogen decarboxylase family protein
            [Eisenbergiella].
ACCESSION   WP_235930834
VERSION     WP_235930834.1
KEYWORDS    RefSeq.
SOURCE      Eisenbergiella
  ORGANISM  Eisenbergiella
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae.
REFERENCE   1  (residues 1 to 99)
  AUTHORS   Fan,J., Liu,Q., Hao,Q., Teng,M. and Niu,L.
  TITLE     Crystal structure of uroporphyrinogen decarboxylase from Bacillus
            subtilis
  JOURNAL   J Bacteriol 189 (9), 3573-3580 (2007)
   PUBMED   17122346
REFERENCE   2  (residues 1 to 99)
  AUTHORS   Nishimura,K., Nakayashiki,T. and Inokuchi,H.
  TITLE     Cloning and sequencing of the hemE gene encoding uroporphyrinogen
            III decarboxylase (UPD) from Escherichia coli K-12
  JOURNAL   Gene 133 (1), 109-113 (1993)
   PUBMED   8224882
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013381.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01208.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Eisenbergiella"
                     /db_xref="taxon:1432051"
     Protein         1..99
                     /product="uroporphyrinogen decarboxylase family protein"
                     /GO_function="GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /calculated_mol_wt=10877
     Region          <23..90
                     /region_name="HemE"
                     /note="Uroporphyrinogen-III decarboxylase HemE [Coenzyme
                     transport and metabolism]; COG0407"
                     /db_xref="CDD:440176"
ORIGIN      
        1 mdgkirvaiv pvdlkkgflk aaahanrmek krkvfhggid tqgllpfgkp eevkrevrrf
       61 mdllgkdggy ilmasqgfeg dvpienieav ysvdrsccn
//
LOCUS       WP_235930835              92 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: AAA family ATPase [Eisenbergiella].
ACCESSION   WP_235930835
VERSION     WP_235930835.1
KEYWORDS    RefSeq.
SOURCE      Eisenbergiella
  ORGANISM  Eisenbergiella
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024573.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13175.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Eisenbergiella"
                     /db_xref="taxon:1432051"
     Protein         1..92
                     /product="AAA family ATPase"
                     /calculated_mol_wt=10067
     Region          1..>92
                     /region_name="COG3950"
                     /note="Predicted ATP-binding protein involved in virulence
                     [General function prediction only]"
                     /db_xref="CDD:443150"
ORIGIN      
        1 mkirhlglen vtvfdkieia fdeginifig engtgkthil kilyaacqaa dpktsfsaki
       61 vrtmlpdefk isrlitrkpg nhnseikvsa gk
//
LOCUS       WP_235930837             183 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MATE family efflux transporter [Eisenbergiella].
ACCESSION   WP_235930837
VERSION     WP_235930837.1
KEYWORDS    RefSeq.
SOURCE      Eisenbergiella
  ORGANISM  Eisenbergiella
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01554.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Eisenbergiella"
                     /db_xref="taxon:1432051"
     Protein         1..183
                     /product="MATE family efflux transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=20295
     Region          9..>54
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
     Region          <94..167
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 mtddlferap vprayfklal pvvfsmvisl vynmvdtffi artqntsiva gvslcacfyt
       61 ddspgryfrp grqlrdfqav rsekggrhgn cdevnmivml imvgfafgaq pligynygae
      121 nrerlrkiir fdlcvelvfs vvcagllalc apqimgifmk daaviavily mqtqnaakkl
      181 slp
//
LOCUS       WP_235930915             299 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Eisenbergiella porci].
ACCESSION   WP_235930915
VERSION     WP_235930915.1
KEYWORDS    RefSeq.
SOURCE      Eisenbergiella porci
  ORGANISM  Eisenbergiella porci
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Eisenbergiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017416.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05598.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Eisenbergiella porci"
                     /db_xref="taxon:2652274"
     Protein         1..>299
                     /product="transposase"
     Region          59..119
                     /region_name="DUF772"
                     /note="Transposase domain (DUF772); pfam05598"
                     /db_xref="CDD:461687"
ORIGIN      
        1 mafrinsyqq lsltdsysgl tcreqqaler swaktfsedi fpsideepfa vlyssnasrp
       61 ntpvnvciga liikevfgis ddeivenlml dpryqyalht tsyeeqplsd kslsrfrkrc
      121 ydyesvygvd llhncivgls dkiakmmdin prikrmdsmm iaanirklsr tellytcvak
      181 mviylhknnq kdlpkkfdhy cdpndynrtf yynndsetdn qlktvledad ellsvcgsdy
      241 ddvteyqlli rclseqtivd eavrrlrtke dggfhsgmlq npsdpdatfr tkagkehqg
//
LOCUS       WP_235931056             137 aa            linear   BCT 02-MAR-2025
DEFINITION  group II intron maturase-specific domain-containing protein
            [Eisenbergiella porci].
ACCESSION   WP_235931056
VERSION     WP_235931056.1
KEYWORDS    RefSeq.
SOURCE      Eisenbergiella porci
  ORGANISM  Eisenbergiella porci
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Eisenbergiella.
REFERENCE   1  (residues 1 to 137)
  AUTHORS   Centron,D. and Roy,P.H.
  TITLE     Presence of a group II intron in a multiresistant Serratia
            marcescens strain that harbors three integrons and a novel gene
            fusion
  JOURNAL   Antimicrob Agents Chemother 46 (5), 1402-1409 (2002)
   PUBMED   11959575
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019984.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08388.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Eisenbergiella porci"
                     /db_xref="taxon:2652274"
     Protein         1..137
                     /product="group II intron maturase-specific
                     domain-containing protein"
                     /calculated_mol_wt=16741
     Region          <6..73
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 mllntktvrk mkdrireitr kskgwgneyr rqklteyvrg winyykladm kglmaetdew
       61 lrrkiraiyw kqwkkvktry rnlralklee wqvhqiansr kgywrtaqml nvaltnkiia
      121 rlgyismsdy ylkicen
//
LOCUS       WP_235931137             288 aa            linear   BCT 02-MAR-2025
DEFINITION  asparaginase domain-containing protein [Paracoccus xiamenensis].
ACCESSION   WP_235931137
VERSION     WP_235931137.1
KEYWORDS    RefSeq.
SOURCE      Paracoccus xiamenensis
  ORGANISM  Paracoccus xiamenensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Paracoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012913.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00710.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Paracoccus xiamenensis"
                     /db_xref="taxon:2714901"
     Protein         1..288
                     /product="asparaginase domain-containing protein"
                     /EC_number="3.5.1.1"
                     /calculated_mol_wt=29496
     Region          7..280
                     /region_name="L-asparaginase_like"
                     /note="Bacterial L-asparaginases and related enzymes;
                     cl00216"
                     /db_xref="CDD:469665"
     Site            order(14..15,57..58,84..86,111,155)
                     /site_type="active"
                     /db_xref="CDD:199205"
     Site            order(56,58..62,65,86..87,90,112,155..159,186..188,
                     190..192,195,197..198,201..202,205,213,215..217,219,221,
                     244,249..250,275..276,279)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:199205"
ORIGIN      
        1 miakneilil htggtigmmp gpdglrpasg lvekalaeit pegvtirvva fdplldsaev
       61 gpvhwnrlid avhaatggvl ithgtdtmty tgaalsqalq gidrpvvlcg smhplgtggd
      121 aeenlalalk tvmsgeagvs lafagevlpa sglvkqdsqh anafrsvaqr pldgalryrt
      181 fadkrlavlt itpgipaavi daalkkldga vlrvygtgtm msdpalltvl taacdrgcrl
      241 ravsqcengg lvpgsyaaga piwqagvqng gpetaeaala hiwlelsd
//
LOCUS       WP_235931139             210 aa            linear   BCT 02-MAR-2025
DEFINITION  nitroreductase family protein [Paracoccus xiamenensis].
ACCESSION   WP_235931139
VERSION     WP_235931139.1
KEYWORDS    RefSeq.
SOURCE      Paracoccus xiamenensis
  ORGANISM  Paracoccus xiamenensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Paracoccus.
REFERENCE   1  (residues 1 to 210)
  AUTHORS   de Oliveira,I.M., Henriques,J.A. and Bonatto,D.
  TITLE     In silico identification of a new group of specific bacterial and
            fungal nitroreductases-like proteins
  JOURNAL   Biochem Biophys Res Commun 355 (4), 919-925 (2007)
   PUBMED   17331467
REFERENCE   2  (residues 1 to 210)
  AUTHORS   Hecht,H.J., Erdmann,H., Park,H.J., Sprinzl,M. and Schmid,R.D.
  TITLE     Crystal structure of NADH oxidase from Thermus thermophilus
  JOURNAL   Nat Struct Biol 2 (12), 1109-1114 (1995)
   PUBMED   8846223
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013077.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00881.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Paracoccus xiamenensis"
                     /db_xref="taxon:2714901"
     Protein         1..210
                     /product="nitroreductase family protein"
                     /calculated_mol_wt=22850
     Region          13..206
                     /region_name="Nitro_FMN_reductase"
                     /note="nitroreductase family protein; cl00514"
                     /db_xref="CDD:444950"
     Site            order(16,18,37,39..40,42,45..46,48,50,52,54..59,139,
                     141..142,145..146,149..150,162..163,173)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:380311"
     Site            order(18,20,22,49,162..163)
                     /site_type="other"
                     /note="FMN binding site [chemical binding]"
                     /db_xref="CDD:380311"
ORIGIN      
        1 msgnfamphp tihlierrvs anqfdashrl tdteigelvr latraptayn lqnwrfiaar
       61 tqnaktrlrq laygqakvse aavtfiicgq tpdhttladr lrpfveaghm pqdmasvwqe
      121 nvgvqyaepr aardeairsa algaatlmya aeamnlasgl mggfdadava refglarnet
      181 pvmllavgra apgnwpqkpr rplsevlqis
//
LOCUS       WP_235931446             508 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase 87 family protein [Actinomyces respiraculi].
ACCESSION   WP_235931446
VERSION     WP_235931446.1
KEYWORDS    RefSeq.
SOURCE      Actinomyces respiraculi
  ORGANISM  Actinomyces respiraculi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Actinomycetales; Actinomycetaceae; Actinomyces.
REFERENCE   1  (residues 1 to 508)
  AUTHORS   Birch,H.L., Alderwick,L.J., Bhatt,A., Rittmann,D., Krumbach,K.,
            Singh,A., Bai,Y., Lowary,T.L., Eggeling,L. and Besra,G.S.
  TITLE     Biosynthesis of mycobacterial arabinogalactan: identification of a
            novel alpha(1-->3) arabinofuranosyltransferase
  JOURNAL   Mol Microbiol 69 (5), 1191-1206 (2008)
   PUBMED   18627460
REFERENCE   2  (residues 1 to 508)
  AUTHORS   Morita,Y.S., Sena,C.B., Waller,R.F., Kurokawa,K., Sernee,M.F.,
            Nakatani,F., Haites,R.E., Billman-Jacobe,H., McConville,M.J.,
            Maeda,Y. and Kinoshita,T.
  TITLE     PimE is a polyprenol-phosphate-mannose-dependent
            mannosyltransferase that transfers the fifth mannose of
            phosphatidylinositol mannoside in mycobacteria
  JOURNAL   J Biol Chem 281 (35), 25143-25155 (2006)
   PUBMED   16803893
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021134.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09594.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Actinomyces respiraculi"
                     /db_xref="taxon:2744574"
     Protein         1..508
                     /product="glycosyltransferase 87 family protein"
                     /GO_function="GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=53762
     Region          42..508
                     /region_name="PMT_2"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; cl21590"
                     /db_xref="CDD:473917"
ORIGIN      
        1 mrtgtdspgs drgssepgss davspasttp eagpvpgarp graarpeplt psvlaltala
       61 vlgsltgwaa vavvtqpwlv sddggpvfhl dawiyrtave qwraggslyd wwvfpaehml
      121 pftyppfaaw aftpltwvdh elsqtlltva tpvavavtiw aclrsvlpgd llrsagrrgp
      181 glsrpvvlav avpwltvvsv alvepvyktm eygqvnavlm alvavdllvv prgsrwrgvl
      241 sglaaafklt paiavlvlla rrewraaatm vagalvvtvg aavasplesw qffsramwdp
      301 tragnadyag nqnlravlar awptslpehg tslvwaavva asivgawlll rrleptgvhg
      361 rgrtdaevpg grggstvgdp vggglaegra gldpaegtvp llqvsvtmvl gllispisws
      421 hhwvwavpal ialvaaairw rrvsllavag gggvvyllaa hwwftegnhi erdwpwwqql
      481 lgssytwwal gagvvvgltl rrdrvptp
//
LOCUS       WP_235931466             243 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: LuxR C-terminal-related transcriptional regulator
            [Actinomyces].
ACCESSION   WP_235931466
VERSION     WP_235931466.1
KEYWORDS    RefSeq.
SOURCE      Actinomyces
  ORGANISM  Actinomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Actinomycetales; Actinomycetaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Actinomyces"
                     /db_xref="taxon:1654"
     Protein         1..243
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=25099
     Region          29..242
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 msaatptgpa pdptgagpap atpparrlrv ivvddhtlvr agvraeldln apdlevvaea
       61 ddvggavaav halvpdvvll dvhlpggngg ggaevvasch dvpdtrflal svsdasedvv
      121 sviragargy vtkaisaedl aqavrrvaag daafsprlag fvldafgagt gevavadsel
      181 drlsarerev mrliargyty kecaselfis vktvethvsa vlrklqlsnr neltrwaaar
      241 riv
//
LOCUS       WP_235931536             255 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: response regulator [Actinomyces].
ACCESSION   WP_235931536
VERSION     WP_235931536.1
KEYWORDS    RefSeq.
SOURCE      Actinomyces
  ORGANISM  Actinomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Actinomycetales; Actinomycetaceae.
REFERENCE   1  (residues 1 to 255)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Actinomyces"
                     /db_xref="taxon:1654"
     Protein         1..255
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=26202
     Region          20..251
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mssstdspva gtsssppagp irvllvdddp ltrsairqfl rppdrftvvg ecadgeqave
       61 aveglpvdvv lmdlgmpvmd gveatrrica aptapqvvvl ttwdvddavv raieagasgy
      121 llkveapgql aaaltrvvtg epvlspgamr qllehvrtqq tgpdgpwppt deatpstglm
      181 pqtgptsgpt agveltprer eavagaaegl sneeigarly vsastvktll ssaqgrlgar
      241 nrtqvavlav rggli
//
LOCUS       WP_235931549             458 aa            linear   BCT 02-MAR-2025
DEFINITION  serpin family protein [Actinomyces respiraculi].
ACCESSION   WP_235931549
VERSION     WP_235931549.1
KEYWORDS    RefSeq.
SOURCE      Actinomyces respiraculi
  ORGANISM  Actinomyces respiraculi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Actinomycetales; Actinomycetaceae; Actinomyces.
REFERENCE   1  (residues 1 to 458)
  AUTHORS   Wright,H.T.
  TITLE     The structural puzzle of how serpin serine proteinase inhibitors
            work
  JOURNAL   Bioessays 18 (6), 453-464 (1996)
   PUBMED   8787534
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012308.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00079.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Actinomyces respiraculi"
                     /db_xref="taxon:2744574"
     Protein         1..458
                     /product="serpin family protein"
                     /calculated_mol_wt=48733
     Region          11..456
                     /region_name="SERPIN"
                     /note="Serine protease inhibitor [Posttranslational
                     modification, protein turnover, chaperones]; COG4826"
                     /db_xref="CDD:443854"
ORIGIN      
        1 mtirstsplv rrrtlltvpp lltvlaacgq apnqmgtalt dpatvlssra eprvlaltda
       61 pyvgaavsac delgavmlsh rlsedpasna vvcpvgagfa lamlyagatd lpnevthllg
      121 feaaasypng lpaerdtsws alqqsmqrld spsalegfdp eelperpllh vadrllvvrp
      181 qdpkaggtvr qdyldtattw ygaevmetdl dhakesldaw anlhtgglvp tsamtvtedt
      241 rlvlqnavll aarwqqpfda dateegdfhr adgttsrvsc mtqiawfpvv fsegwralrm
      301 lyantdstla mdlilpddvv hpadlpaetw aeasallese aqsteaqvrl mlprldlapg
      361 pinlkdvlss igvelgslph igdelgvgea iqqvrlrvde egtvgaalte vnvgvlaapl
      421 peeepigfsc dhpfvlrvvd rasgvcvfea avldpaae
//
LOCUS       WP_235931284              83 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2834 domain-containing protein [Paracoccus xiamenensis].
ACCESSION   WP_235931284
VERSION     WP_235931284.1
KEYWORDS    RefSeq.
SOURCE      Paracoccus xiamenensis
  ORGANISM  Paracoccus xiamenensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Paracoccus.
REFERENCE   1  (residues 1 to 83)
  AUTHORS   Wight,W.D., Kim,K.H., Lawrence,C.B. and Walton,J.D.
  TITLE     Biosynthesis and role in virulence of the histone deacetylase
            inhibitor depudecin from Alternaria brassicicola
  JOURNAL   Mol Plant Microbe Interact 22 (10), 1258-1267 (2009)
   PUBMED   19737099
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022643.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11196.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Paracoccus xiamenensis"
                     /db_xref="taxon:2714901"
     Protein         1..83
                     /product="DUF2834 domain-containing protein"
                     /calculated_mol_wt=8819
ORIGIN      
        1 mgfeltplra cwlglavmga laglppaapg wnvavallal avwclvetmv rrnwlalltf
       61 pamvlgigca lplylflrsr ria
//
LOCUS       WP_235931714             533 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class III-fold pyridoxal phosphate-dependent
            enzyme [Sheuella amnicola].
ACCESSION   WP_235931714
VERSION     WP_235931714.1
KEYWORDS    RefSeq.
SOURCE      Sheuella amnicola
  ORGANISM  Sheuella amnicola
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Sheuella.
REFERENCE   1  (residues 1 to 533)
  AUTHORS   Shen,B.W., Hennig,M., Hohenester,E., Jansonius,J.N. and Schirmer,T.
  TITLE     Crystal structure of human recombinant ornithine aminotransferase
  JOURNAL   J Mol Biol 277 (1), 81-102 (1998)
   PUBMED   9514741
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012428.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00202.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Sheuella amnicola"
                     /db_xref="taxon:2707330"
     Protein         1..533
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /calculated_mol_wt=61031
     Region          113..503
                     /region_name="HemL"
                     /note="Glutamate-1-semialdehyde aminotransferase [Coenzyme
                     transport and metabolism]; COG0001"
                     /db_xref="CDD:439772"
ORIGIN      
        1 mgkalqrlql slakspslgg hlrwakriag wiqgyaydpk rwfhidgade qiqqmrrqal
       61 arlgedlrvr sevtlrysnv akpmlpdlqf isnyrvpfqf revlqqhial gsfwkssdgv
      121 wltdpdgnry idvtgsygvn vfgqdfykdc iaqggelvqd lgpvlgsyhp cvldnlerlq
      181 kisgkeqftf hmsgteavmq avrvaryttg kkkivrftsa yhgwwddvqp gpgnpmppsr
      241 htltlremha ntlrvlrnrk diacvlvnpi qamhpnrvap tdstlvtggr rtnydrqayt
      301 swlkelrqvc tekgillimd eiflgfrlap hgaqqffdvk adlitygkti agglpigvvc
      361 gnadvmtrfh ndrpadicfa rgtfkehpyv mgamnaflrs ieskeiktly sdldatwsmr
      421 mhklnqlfkt eglplhvdgl stvwavsfdv pscynwmlqf ylrlegials wvgtgrmifs
      481 lsftdedfeq fcqrfiraah qmatdgwwwt pegqtnkrir qrilmemlkr rfr
//
LOCUS       WP_235931962             194 aa            linear   BCT 02-MAR-2025
DEFINITION  histidine phosphatase family protein [Sheuella amnicola].
ACCESSION   WP_235931962
VERSION     WP_235931962.1
KEYWORDS    RefSeq.
SOURCE      Sheuella amnicola
  ORGANISM  Sheuella amnicola
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Sheuella.
REFERENCE   1  (residues 1 to 194)
  AUTHORS   Rigden,D.J.
  TITLE     The histidine phosphatase superfamily: structure and function
  JOURNAL   Biochem J 409 (2), 333-348 (2008)
   PUBMED   18092946
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012521.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00300.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Sheuella amnicola"
                     /db_xref="taxon:2707330"
     Protein         1..194
                     /product="histidine phosphatase family protein"
                     /calculated_mol_wt=21281
     Region          28..165
                     /region_name="HP"
                     /note="Histidine phosphatase domain found in a
                     functionally diverse set of proteins, mostly phosphatases;
                     contains a His residue which is phosphorylated during the
                     reaction; cl11399"
                     /db_xref="CDD:472174"
     Site            order(42..43,98,155)
                     /site_type="active"
                     /note="catalytic core [active]"
                     /db_xref="CDD:132718"
ORIGIN      
        1 mspfhhilrs iifliscfif mgqsnaglih dlqdgqhvil irhadapgyg dpvgytigqc
       61 stqrnlgdyg kkqasaigiw lskqgietaq iysspwcrcl dtahllnkgp vttesslgsf
      121 fdnmslekkq tkelesfiks tltkhpqtpi ilvthhvnie aytgkvvsvg divlvkvdkd
      181 gkhishtvyp spkn
//
LOCUS       WP_235931984             708 aa            linear   BCT 02-MAR-2025
DEFINITION  tape measure protein [Cereibacter sphaeroides].
ACCESSION   WP_235931984
VERSION     WP_235931984.1
KEYWORDS    RefSeq.
SOURCE      Cereibacter sphaeroides
  ORGANISM  Cereibacter sphaeroides
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Cereibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040129.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20155.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Cereibacter sphaeroides"
                     /db_xref="taxon:1063"
     Protein         1..708
                     /product="tape measure protein"
                     /calculated_mol_wt=74645
     Region          4..>513
                     /region_name="HI1514"
                     /note="Phage tail tape-measure protein, controls tail
                     length [Mobilome: prophages, transposons]; COG3941"
                     /db_xref="CDD:443141"
ORIGIN      
        1 mgeglgsvtg aalrggavla gyagtvslia gaflrpaaef erfrvqltnl egsaegadra
       61 mrwiedfatr tplqlndtva ayarlkafgl dptkgamqal vdtmaatggg aeqldglvla
      121 lgqawtkgkl qgeealqmle rgvpvwdllg aklgktaael qemaskgqlg rkeielliea
      181 maeknkgase gmaktwdgil snvldhwgrf qrmvmasgvf dflkgrlqei lgalnamaed
      241 grlqlwadev arvilktlea mwafagqava awnllvpvvt qmadllggwd rlawfaasll
      301 mgrivlslig gfltfgrgll lvvtglagma ghavaaatif arlglmmrgv laagfrlvra
      361 gaviagtaiq wlgralllag raalanpill viaaiagaaw viyqnwdgiv gyfqdkidrv
      421 raafdqglln gvlaalaafn pfvlmmdaae elfhyltgwd fgdirraiae afgfdpftai
      481 rsaaesffvy ltgwsfadit aaltsafdid lfqmgvdmil slwegiksvm gqltayvreq
      541 lsglipempa wlkglggges sggegsdrpt rgavagpaav apkpwaavta gqralggpvr
      601 agqiylwqeq gqelfvprtd gevisnrqlr alqamaaapa qirvvagggr aggsapaaar
      661 aprleiggit ihaapgmsps dvartvrrel qavarergla lhdggehd
//
LOCUS       WP_235931994             453 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA cytosine methyltransferase [Cereibacter sphaeroides].
ACCESSION   WP_235931994
VERSION     WP_235931994.1
KEYWORDS    RefSeq.
SOURCE      Cereibacter sphaeroides
  ORGANISM  Cereibacter sphaeroides
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Cereibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012372.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00145.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Cereibacter sphaeroides"
                     /db_xref="taxon:1063"
     Protein         1..453
                     /product="DNA cytosine methyltransferase"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=49352
     Region          7..>103
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
     Region          148..>199
                     /region_name="Rad17"
                     /note="Rad17 P-loop domain; pfam03215"
                     /db_xref="CDD:367398"
ORIGIN      
        1 mlaepdyhtr afvewedwpr tvlvaaqrag yfapapiwtd lrsfdarpfr gafdavlagy
       61 pcqpfsaagk rggaddprhi wpdvarvige crpdwvflen vaghvtlgld tvlrelwglp
      121 vrqpggieal rpflntased dfrmmvawll gcfhprgpyp ililtgeqgs aksttakvlr
      181 slidpanpma rsapqseqdl viaarhnhvl afdnlstvkp aladalcria tgggfgtrkl
      241 htdsdealft atrpillngi pdlasrpdla draiilhlpv ieagarqfea efwkaldraa
      301 pgilaallda tscalarigs vslaerprma dfakritaae palgwpqgaf ldaytrnrqs
      361 tqaaaldgnp laeaiialvt qhgpwqgtat ellkilrqta paltadpltf pryanqltsa
      421 lrrvqpllrd rnvivtqdre sgtgqrvirl qcr
//
LOCUS       WP_235931997             375 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Cereibacter
            sphaeroides].
ACCESSION   WP_235931997
VERSION     WP_235931997.1
KEYWORDS    RefSeq.
SOURCE      Cereibacter sphaeroides
  ORGANISM  Cereibacter sphaeroides
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Cereibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13458.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Cereibacter sphaeroides"
                     /db_xref="taxon:1063"
     Protein         1..375
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=39773
     Region          12..352
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mlatplwade ivvgdlhpit gpanfyglpe sraiqlavee inaagglsvg geshtfriqt
       61 edtqanptvg vsalkklvss dvrfvigpls sgvgpalfpi idrsdaitqi idgtiaegvt
      121 ngrnifrnqa tvsqydvsvv dlfkakgygs vtmmtdrfha gfvgtqpala aslkelgaei
      181 ageegyklgd tdfsatltrv asrnpdvlli rgypaegali tkqarqlgfe gqvvwemvsp
      241 pstvlknisa aemegvynci pattedyial gnekaialee ayrarfnepa gelsvlsyda
      301 vhilkaaiek agsleneavn aalaeltvee vpqlisdyvp geggqlfddr gqvtlrsavs
      361 vwqgegwhpa tdvir
//
LOCUS       WP_235932012              50 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein [Cereibacter sphaeroides].
ACCESSION   WP_235932012
VERSION     WP_235932012.1
KEYWORDS    RefSeq.
SOURCE      Cereibacter sphaeroides
  ORGANISM  Cereibacter sphaeroides
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Cereibacter.
REFERENCE   1  (residues 1 to 50)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..50
                     /organism="Cereibacter sphaeroides"
                     /db_xref="taxon:1063"
     Protein         1..50
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=5132
     Region          12..>41
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            22..28
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
ORIGIN      
        1 mrhatapgra qpaasllvia gagsgktstl ahrvahllvn eddplhlrrq
//
LOCUS       WP_235931980             157 aa            linear   BCT 02-MAR-2025
DEFINITION  TagF domain-containing protein [Cereibacter sphaeroides].
ACCESSION   WP_235931980
VERSION     WP_235931980.1
KEYWORDS    RefSeq.
SOURCE      Cereibacter sphaeroides
  ORGANISM  Cereibacter sphaeroides
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Cereibacter.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Silverman,J.M., Austin,L.S., Hsu,F., Hicks,K.G., Hood,R.D. and
            Mougous,J.D.
  TITLE     Separate inputs modulate phosphorylation-dependent and -independent
            type VI secretion activation
  JOURNAL   Mol Microbiol 82 (5), 1277-1290 (2011)
   PUBMED   22017253
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021393.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09867.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Cereibacter sphaeroides"
                     /db_xref="taxon:1063"
     Protein         1..157
                     /product="TagF domain-containing protein"
                     /calculated_mol_wt=16065
     Region          2..>127
                     /region_name="TagF_N"
                     /note="TagF N-terminal domain, Type VI secretion
                     system-associated; cl01611"
                     /db_xref="CDD:470268"
ORIGIN      
        1 magffgklps tgdfvtrgls pafraawdgw itrhvagrfg agpegglrmr lrsggrvagg
       61 vvlpgrdrig rsfplslllv adglpgpdgl dpwceaaraa aavhpepdal wqalsdipvp
      121 egdaaaappl llwtgkasaa cdprnpaeal grllvtg
//
LOCUS       WP_235932045             115 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Cereibacter sphaeroides].
ACCESSION   WP_235932045
VERSION     WP_235932045.1
KEYWORDS    RefSeq.
SOURCE      Cereibacter sphaeroides
  ORGANISM  Cereibacter sphaeroides
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Cereibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02371.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Cereibacter sphaeroides"
                     /db_xref="taxon:1063"
     Protein         1..115
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=12234
     Region          <1..100
                     /region_name="COG3547"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442768"
ORIGIN      
        1 mlrarcllfd dlacldsqlv alaksnpvtr lpiatlgvga ivaptfrrav ndpdrfprsr
       61 dlgagtglip rrwqsgktdi sgrittagdp rgrvmlfeaa aslfgrarvm splts
//
LOCUS       WP_235932081             186 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Cereibacter sphaeroides].
ACCESSION   WP_235932081
VERSION     WP_235932081.1
KEYWORDS    RefSeq.
SOURCE      Cereibacter sphaeroides
  ORGANISM  Cereibacter sphaeroides
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Cereibacter.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 186)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012234.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00004.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Cereibacter sphaeroides"
                     /db_xref="taxon:1063"
     Protein         1..186
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=21513
     Region          1..164
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 mkrvmivgqp gsgkstlare vgsrtglpvf hidhihwtag wiersreekt rlcqevhare
       61 ewifegghsa twperlarcd tliwldvpih vrlwrvflrs lqyrgrtrpd lpdgcpeqfd
      121 wsfyrwiwnt rissraqier lvadapgdkv iirlqsasei rmfltrlpes sgtlsscgtq
      181 plvprr
//
LOCUS       WP_235932086             142 aa            linear   BCT 02-MAR-2025
DEFINITION  EF-hand domain-containing protein [Cereibacter sphaeroides].
ACCESSION   WP_235932086
VERSION     WP_235932086.1
KEYWORDS    RefSeq.
SOURCE      Cereibacter sphaeroides
  ORGANISM  Cereibacter sphaeroides
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Cereibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025203.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13833.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Cereibacter sphaeroides"
                     /db_xref="taxon:1063"
     Protein         1..142
                     /product="EF-hand domain-containing protein"
                     /GO_function="GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=14673
     Region          23..137
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
ORIGIN      
        1 malvfmlqvt gaaaqspgam fveqwdadgd grvtlgeaqs rradlfdafd sdgdgalgpq
       61 eladmeamra amqeanraaa grasragtsg aagpggpgrl drdgdgrvsr defvgstgsw
      121 fawrdrdgdg altsadfgrg rw
//
LOCUS       WP_235932112             192 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase large subunit domain-containing protein, partial
            [Cereibacter sphaeroides].
ACCESSION   WP_235932112
VERSION     WP_235932112.1
KEYWORDS    RefSeq.
SOURCE      Cereibacter sphaeroides
  ORGANISM  Cereibacter sphaeroides
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Cereibacter.
REFERENCE   1  (residues 1 to 192)
  AUTHORS   Xu,R.G., Jenkins,H.T., Chechik,M., Blagova,E.V., Lopatina,A.,
            Klimuk,E., Minakhin,L., Severinov,K., Greive,S.J. and Antson,A.A.
  TITLE     Viral genome packaging terminase cleaves DNA using the canonical
            RuvC-like two-metal catalysis mechanism
  JOURNAL   Nucleic Acids Res 45 (6), 3580-3590 (2017)
   PUBMED   28100693
REFERENCE   2  (residues 1 to 192)
  AUTHORS   Hilbert,B.J., Hayes,J.A., Stone,N.P., Duffy,C.M., Sankaran,B. and
            Kelch,B.A.
  TITLE     Structure and mechanism of the ATPase that powers viral genome
            packaging
  JOURNAL   Proc Natl Acad Sci U S A 112 (29), E3792-E3799 (2015)
   PUBMED   26150523
REFERENCE   3  (residues 1 to 192)
  AUTHORS   Schouler,C., Ehrlich,S.D. and Chopin,M.C.
  TITLE     Sequence and organization of the lactococcal prolate-headed bIL67
            phage genome
  JOURNAL   Microbiology (Reading) 140 (Pt 11), 3061-3069 (1994)
   PUBMED   7812447
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015321.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03354.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Cereibacter sphaeroides"
                     /db_xref="taxon:1063"
     Protein         <1..>192
                     /product="terminase large subunit domain-containing
                     protein"
     Region          1..>192
                     /region_name="YmfN"
                     /note="Phage terminase-like protein, large subunit,
                     contains N-terminal HTH domain [Mobilome: prophages,
                     transposons]; COG4626"
                     /db_xref="CDD:443665"
ORIGIN      
        1 pidhpvsrya ldvvegreta gelvrlaclr hltdletgrd rglwfdckaa srvlnfaeli
       61 qhttgplagr pltlrpwqaf rhgsvfgwkk egglrrfrtt yhqvakkngk ttdtavpalf
      121 talfdreaap qgycaattrd qagllfrelk rmirasphls almqvwrtsi evpateglia
      181 clsrdgnssd gi
//
LOCUS       WP_235932323              92 aa            linear   BCT 02-MAR-2025
DEFINITION  RNase A-like domain-containing protein [Priestia flexa].
ACCESSION   WP_235932323
VERSION     WP_235932323.1
KEYWORDS    RefSeq.
SOURCE      Priestia flexa
  ORGANISM  Priestia flexa
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
REFERENCE   1  (residues 1 to 92)
  AUTHORS   Batot,G., Michalska,K., Ekberg,G., Irimpan,E.M., Joachimiak,G.,
            Jedrzejczak,R., Babnigg,G., Hayes,C.S., Joachimiak,A. and
            Goulding,C.W.
  TITLE     The CDI toxin of Yersinia kristensenii is a novel bacterial member
            of the RNase A superfamily
  JOURNAL   Nucleic Acids Res 45 (9), 5013-5025 (2017)
   PUBMED   28398546
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037816.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18431.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Priestia flexa"
                     /db_xref="taxon:86664"
     Protein         1..92
                     /product="RNase A-like domain-containing protein"
                     /calculated_mol_wt=10028
     Region          <5..91
                     /region_name="CdiA-CT_Yk_RNaseA-like"
                     /note="C-terminal (CT) domain of the contact-dependent
                     growth inhibition (CDI) system protein CdiA (CdiA-CT) of
                     Yersinia kristensenii, and similar proteins; cl39768"
                     /db_xref="CDD:454353"
ORIGIN      
        1 msclsssftn rataekvask vlnnskniek iqkwlsdsns rpklqlkyqg ngeiigksvs
       61 rnsevvenvt nakiilkksn dgnfiltgyp vk
//
LOCUS       WP_235932330             146 aa            linear   BCT 02-MAR-2025
DEFINITION  spore germination protein [Priestia flexa].
ACCESSION   WP_235932330
VERSION     WP_235932330.1
KEYWORDS    RefSeq.
SOURCE      Priestia flexa
  ORGANISM  Priestia flexa
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
REFERENCE   1  (residues 1 to 146)
  AUTHORS   Paidhungat,M. and Setlow,P.
  TITLE     Role of ger proteins in nutrient and nonnutrient triggering of
            spore germination in Bacillus subtilis
  JOURNAL   J Bacteriol 182 (9), 2513-2519 (2000)
   PUBMED   10762253
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015292.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03323.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Priestia flexa"
                     /db_xref="taxon:86664"
     Protein         1..146
                     /product="spore germination protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009847 - spore germination [Evidence
                     IEA]"
                     /calculated_mol_wt=15951
     Region          <15..>85
                     /region_name="GerA"
                     /note="Bacillus/Clostridium GerA spore germination
                     protein; cl10605"
                     /db_xref="CDD:471992"
ORIGIN      
        1 mtitkdgwqv lsyaffaifq fslrsffsai yislvsfhqg llptelaiti aatredvpfs
       61 pfieamvmev tiellreagl rlptpvgqtv glvggvvivv gsllpktagd viafadllsw
      121 afliiflavp fflgsimlik krvrri
//
LOCUS       WP_235932352             133 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3231 family protein [Priestia flexa].
ACCESSION   WP_235932352
VERSION     WP_235932352.1
KEYWORDS    RefSeq.
SOURCE      Priestia flexa
  ORGANISM  Priestia flexa
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022986.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11553.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Priestia flexa"
                     /db_xref="taxon:86664"
     Protein         1..133
                     /product="DUF3231 family protein"
                     /calculated_mol_wt=15021
     Region          <1..89
                     /region_name="DUF3231"
                     /note="Protein of unknown function (DUF3231); pfam11553"
                     /db_xref="CDD:402931"
ORIGIN      
        1 mlqegiplsd ipapkpksdp rqiplvvrat dseianlmse svasniimcs tnisqsirnd
       61 vgmlwlkfhs ekvafgfkvk etqrekgwlk nrqatllrvl kftcvnffdi fgltfsktsi
      121 yiarrlifsl kne
//
LOCUS       WP_235932423            1221 aa            linear   BCT 02-MAR-2025
DEFINITION  reprolysin-like metallopeptidase [Flagellimonas sediminis].
ACCESSION   WP_235932423
VERSION     WP_235932423.1
KEYWORDS    RefSeq.
SOURCE      Flagellimonas sediminis
  ORGANISM  Flagellimonas sediminis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flagellimonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024972.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13583.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1221
                     /organism="Flagellimonas sediminis"
                     /db_xref="taxon:2696468"
     Protein         1..1221
                     /product="reprolysin-like metallopeptidase"
                     /GO_function="GO:0008237 - metallopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=131006
     Region          156..357
                     /region_name="ZnMc"
                     /note="Zinc-dependent metalloprotease. This super-family
                     of metalloproteases contains two major branches, the
                     astacin-like proteases and the adamalysin/reprolysin-like
                     proteases. Both branches have wide phylogenetic
                     distribution, and contain sub-families, which...; cl00064"
                     /db_xref="CDD:469599"
     Region          287..945
                     /region_name="COG4935"
                     /note="Regulatory P domain of the subtilisin-like
                     proprotein convertases and other proteases
                     [Posttranslational modification, protein turnover,
                     chaperones]"
                     /db_xref="CDD:443962"
     Site            order(297..298,301,307)
                     /site_type="active"
                     /db_xref="CDD:239795"
     Region          1147..1221
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mksasikdmg kakkvfsldr qvfmdemkaf gtsksgkkvv ylpdgegnii pftlketpvl
       61 hpdlakkypn iksysgvssn gkykvklsss qnglesmvin lknheqtfme pvsnktdayv
      121 lyakgaglts kddfvcetke tlltsktiip lvddqvlrky riavsatgey tqdqggtvad
      181 alaginatit rinevfetdl svtleliann dlliftnpat dpygnnlnse vqatitsiig
      241 eanydvghlf hkvdnpeqnn gnagfigavc vdnkkgsgfs asatpqgdvf dmdfvahelg
      301 hqfganhtws fesegtgvqa epgsgttimg yagitkdndv apngddyfhy ysiqqisdyl
      361 qttscaqitp ltdsppiltp vgdytipkgt afvlegiatd pdvgdvlsft weqiddgvvt
      421 nttfgptnps ganfrsmpps sepiryfpkl sevaqgnltq vnptineawe tvseiertln
      481 faftvrdnal gggqvisdvl avnvlkaagp fvvtsqntne vytsgsiqev twdvaktnil
      541 pintqmvdif lsldggqtfp iilaqdelnd gsanilvpgd vttsarimvk asdnvffavn
      601 asdfiieqsq vvlhfdqlef evcqpddlvi pfvyetyagf netstfsadi pagltavfap
      661 tdatandtnv sltlsntgav aaglyditvt stsatvtksv vlsvaiedts ftdvvllspt
      721 dgqigvsldt qltweenpff tqydvevatd agfvnviesa tvpfsfyktn slqaeteyfw
      781 rvrpsngcgt gtfgaafsfi tspvncknme ssdlpitiss tgtptistsv ffwedlpisd
      841 vnvnleldht yledlvitlv spegtrvtll sntcgdlnni navfdddgdp itcsgnpavs
      901 gtvspigsla slkgesilge wileikdtai sdggtligfs ldvcvegsyr pdadedgvfd
      961 dgddlclgtp kgvavntngc avyrfdadnf eveiqsetcr ssndgsvtvt padtsityti
     1021 vfdgggapat vdfsnsqtfg nltageysfc isgtngmity eevcfsvvit epdildvdav
     1081 inagilsldl rgaafynvel nglvtqtqvs kiqlpmkegv ntlrvysdlp cqgviaktff
     1141 ystkpilspn pvdsvtevyl ggyegkvdiq iysgngrlvm smqktvngen lemdlsvlpk
     1201 giyylgltkd gaqemfkfik r
//
LOCUS       WP_235932585             303 aa            linear   BCT 02-MAR-2025
DEFINITION  proline dehydrogenase family protein [Dictyobacter arantiisoli].
ACCESSION   WP_235932585
VERSION     WP_235932585.1
KEYWORDS    RefSeq.
SOURCE      Dictyobacter arantiisoli
  ORGANISM  Dictyobacter arantiisoli
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Dictyobacteraceae; Dictyobacter.
REFERENCE   1  (residues 1 to 303)
  AUTHORS   Ling,M., Allen,S.W. and Wood,J.M.
  TITLE     Sequence analysis identifies the proline dehydrogenase and delta
            1-pyrroline-5-carboxylate dehydrogenase domains of the
            multifunctional Escherichia coli PutA protein
  JOURNAL   J Mol Biol 243 (5), 950-956 (1994)
   PUBMED   7966312
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013761.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01619.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Dictyobacter arantiisoli"
                     /db_xref="taxon:2014874"
     Protein         1..303
                     /product="proline dehydrogenase family protein"
                     /calculated_mol_wt=34256
     Region          23..>286
                     /region_name="PutA"
                     /note="Proline dehydrogenase [Amino acid transport and
                     metabolism]; COG0506"
                     /db_xref="CDD:440272"
ORIGIN      
        1 mmlkdtllyl aqnprlrdfv vqnkltrnvs rrfvageild daayatrlln drgiqvaldl
       61 lgenvstqee akaavraycs aielitktsi aanisvklta lgldigravc eenlalllsv
      121 gqqhnvfvcv dmeastyteq tcaivreaqk qypqvgtviq sylyrsrqdi eqlvgqgmri
      181 rlvkgaykee pdiayqekad vdqnyvqlmk illargnfpa iathdeamid aacafvrehg
      241 iskksfefqm lygirrdlqg klvkegynmr vyvpygshwy pylmrrmaer panlmfvvtn
      301 awh
//
LOCUS       WP_235932781             237 aa            linear   BCT 02-MAR-2025
DEFINITION  5'-nucleotidase C-terminal domain-containing protein [Flagellimonas
            sediminis].
ACCESSION   WP_235932781
VERSION     WP_235932781.1
KEYWORDS    RefSeq.
SOURCE      Flagellimonas sediminis
  ORGANISM  Flagellimonas sediminis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flagellimonas.
REFERENCE   1  (residues 1 to 237)
  AUTHORS   Knofel,T. and Strater,N.
  TITLE     X-ray structure of the Escherichia coli periplasmic 5'-nucleotidase
            containing a dimetal catalytic site
  JOURNAL   Nat Struct Biol 6 (5), 448-453 (1999)
   PUBMED   10331872
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014871.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02872.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Flagellimonas sediminis"
                     /db_xref="taxon:2696468"
     Protein         1..237
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /GO_process="GO:0009166 - nucleotide catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=26158
     Region          <4..221
                     /region_name="UshA"
                     /note="2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or
                     3'-nucleotidase, 5'-nucleotidase family [Nucleotide
                     transport and metabolism, Defense mechanisms]; COG0737"
                     /db_xref="CDD:440500"
ORIGIN      
        1 mackndtgkl teiqgkqlpi nasteetdsi sgfvepfrdr inqvldstla yapksllldd
       61 gkrntsmgnl madivfseaa pifksrtgkd ldfvvlnygg vrsiisagkv tarnayevmp
      121 fenyievvel ngaavrklid fltkatrrhp isgiqivtdk ngslesvniq gkpfdenrny
      181 yvatsdylvq ggasigffde mvsvtdtdyl lrnaiidyfk kvdtvqsvvd drfiqld
//
LOCUS       WP_235932798             467 aa            linear   BCT 02-MAR-2025
DEFINITION  phospholipase D-like domain-containing protein [Peptoniphilus
            faecalis].
ACCESSION   WP_235932798
VERSION     WP_235932798.1
KEYWORDS    RefSeq.
SOURCE      Peptoniphilus faecalis
  ORGANISM  Peptoniphilus faecalis
            Bacteria; Bacillati; Bacillota; Tissierellia; Tissierellales;
            Peptoniphilaceae; Peptoniphilus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13091.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Peptoniphilus faecalis"
                     /db_xref="taxon:2731255"
     Protein         1..467
                     /product="phospholipase D-like domain-containing protein"
                     /calculated_mol_wt=54335
     Region          63..255
                     /region_name="PLDc_SF"
                     /note="Catalytic domain of phospholipase D superfamily
                     proteins; cl15239"
                     /db_xref="CDD:472788"
     Site            order(207,209,221,223,231)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197227"
     Site            207
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197227"
     Region          278..434
                     /region_name="PLDc_SF"
                     /note="Catalytic domain of phospholipase D superfamily
                     proteins; cl15239"
                     /db_xref="CDD:472788"
     Site            order(373,375,392,394,406)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197228"
     Site            373
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197228"
ORIGIN      
        1 mkkkkkimil ivlllifvpi lyslntknpa gtnissefkp adceflydlt ylkdgkrfhq
       61 qkifnremet iknaqkflii dfflfndeyd nsmnfpnqve kmtdllvakk kenpempilf
      121 vtdpinnfyg ayeennlkkl rengiyvvvt dlnkmrdsnv lisggyrayv kwfgtsgggf
      181 iknffdkdae kvnvrsilkl anfkgnhrkv visekealva sanphdpsay hsniamvfrg
      241 ksmedlikse siffnklpnv ienfkaeevt spyklkiite gkiyeeiskn irdakkgdei
      301 nlgmfylsef rilkdlgeas krgayvkiia dlnkdafgle kngtpnrpal selkedypdi
      361 nirwyqtsge qfhtkfiyfk fkdknplail gsanytrrnl dnfnletnla vemeknstlp
      421 remeeyfsri wnnkngeytl plenfyenrf fmrilwkiqe ktglctw
//
LOCUS       WP_235932826             252 aa            linear   BCT 02-MAR-2025
DEFINITION  prolyl oligopeptidase family serine peptidase [Peptoniphilus
            faecalis].
ACCESSION   WP_235932826
VERSION     WP_235932826.1
KEYWORDS    RefSeq.
SOURCE      Peptoniphilus faecalis
  ORGANISM  Peptoniphilus faecalis
            Bacteria; Bacillati; Bacillota; Tissierellia; Tissierellales;
            Peptoniphilaceae; Peptoniphilus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012546.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00326.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Peptoniphilus faecalis"
                     /db_xref="taxon:2731255"
     Protein         1..252
                     /product="prolyl oligopeptidase family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=28919
     Region          10..245
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 mnysdinkin igevpaiiie pnlktnktiv fyhgwgscke nqifrgnifa sygyrvilpd
       61 aryhgernni dldytaedie akyilkvimh nieeapsifk fieenypene iavgghsmga
      121 itagglynfk kdlkmafvyn gindwhalvd alnkikkeek idenefrine ffldmnpmds
      181 penfkdrpiv lyngedddii dpagqesfar kiekfysdkk lldfqtfeat shqvttqmle
      241 asiifskeiv gf
//
LOCUS       WP_235932461            1107 aa            linear   BCT 02-MAR-2025
DEFINITION  BACON domain-containing protein [Dictyobacter arantiisoli].
ACCESSION   WP_235932461
VERSION     WP_235932461.1
KEYWORDS    RefSeq.
SOURCE      Dictyobacter arantiisoli
  ORGANISM  Dictyobacter arantiisoli
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Dictyobacteraceae; Dictyobacter.
REFERENCE   1  (residues 1 to 1107)
  AUTHORS   Jonge,P.A., Meijenfeldt,F.A.B.V., Rooijen,L.E.V., Brouns,S.J.J. and
            Dutilh,B.E.
  TITLE     Evolution of BACON Domain Tandem Repeats in crAssphage and Novel
            Gut Bacteriophage Lineages
  JOURNAL   Viruses 11 (12), 1085 (2019)
   PUBMED   31766550
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040218.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19190.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Dictyobacter arantiisoli"
                     /db_xref="taxon:2014874"
     Protein         1..1107
                     /product="BACON domain-containing protein"
                     /calculated_mol_wt=115284
     Region          306..398
                     /region_name="BACON_2"
                     /note="Viral BACON domain; pfam19190"
                     /db_xref="CDD:408960"
     Region          410..501
                     /region_name="BACON_2"
                     /note="Viral BACON domain; pfam19190"
                     /db_xref="CDD:408960"
     Region          <873..1073
                     /region_name="MJ0795"
                     /note="S-layer protein MJ0795, predicted component of type
                     IV pili-like system [General function prediction only];
                     COG1361"
                     /db_xref="CDD:440972"
ORIGIN      
        1 mpcprcatpl piekalycac cgwslaasss etshvqddat hsqsstvpeg qsvpidnati
       61 sqprpedele piavvattdv qqdplpayas atmhsastyl slsrrkgemh pqpawqkvve
      121 tprrpsttyp prppvplhaw pvlrhipygw llfprllsrp rsffwlsllv llflmagsll
      181 ritqflaplp vsgkdspsit vspqpnvsvg eqltiqlagf qpgvkvglfl dehipifdth
      241 grsqlfvkqd gtfidtvtvs eywgvgthki svedadrhqs ygtsilvman lgsilpahfh
      301 lkvaneldpd tlnlgagdqa tnsirsihlt nsgmgliswq anaqaswlli spqsgnvigd
      361 apaevkiavd ranlepghyt sditfassag nrtlhvtmqv ltlafglrpv lqltpallsf
      421 tgvdgdvhla pqvitvsnpg elplnwqgsv snpswlvlss lkghldaggs attqvevnsg
      481 allpgsynae inftgvgsap inaqtiyvni tikagcslnl stnvlsfidv ahqaapaaqa
      541 ltvnqtpgcs vplgwkalsn tswltidqss gttpssvkve vvpaglpaap qtlngsitfs
      601 ygqstqvllv nltlssvgpl ltvgtstlsf sttpginsav tqalpltntg dsaiawmast
      661 qasggnwlsl ktssgnlaar qsttlqvsam dlstlttits yaglvkidgr saqgktvell
      721 ipvqltvnaa ctlqvspdti tfssyqgqsg qpdtvhtvvm kaegackhnl qwtvttttts
      781 ggnwlsaipr sgnlapnkst atrvgvdlsg ltpniyrgqv qiiardssnp hqiiarktld
      841 vflnmqppct llvpsqlaln ftpattssiq tftvgitgnc gsggvkvvat aastnkwfsv
      901 sdpvvisrgg tatfsvtaqk agltqatgsi sltaleagia ivgspqqvmv nftpppppsf
      961 titvssavin adngkllrsl tiantgsnal twsaallgqq sfvalpvssn tlaagasati
     1021 gllvdptgla agtyavhvai tatdsqtgmt tgpidvfvpi nindtatpsa tsapteapsi
     1081 ipplvptnlv avpsaaviqs vtraatp
//
LOCUS       WP_235932855             779 aa            linear   BCT 02-MAR-2025
DEFINITION  stalk domain-containing protein, partial [Peptoniphilus faecalis].
ACCESSION   WP_235932855
VERSION     WP_235932855.1
KEYWORDS    RefSeq.
SOURCE      Peptoniphilus faecalis
  ORGANISM  Peptoniphilus faecalis
            Bacteria; Bacillati; Bacillota; Tissierellia; Tissierellales;
            Peptoniphilaceae; Peptoniphilus.
REFERENCE   1  (residues 1 to 779)
  AUTHORS   Wilmot,C.M., Hajdu,J., McPherson,M.J., Knowles,P.F. and
            Phillips,S.E.
  TITLE     Visualization of dioxygen bound to copper during enzyme catalysis
  JOURNAL   Science 286 (5445), 1724-1728 (1999)
   PUBMED   10576737
REFERENCE   2  (residues 1 to 779)
  AUTHORS   Parsons,M.R., Convery,M.A., Wilmot,C.M., Yadav,K.D., Blakeley,V.,
            Corner,A.S., Phillips,S.E., McPherson,M.J. and Knowles,P.F.
  TITLE     Crystal structure of a quinoenzyme: copper amine oxidase of
            Escherichia coli at 2 A resolution
  JOURNAL   Structure 3 (11), 1171-1184 (1995)
   PUBMED   8591028
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019450.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07833.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Peptoniphilus faecalis"
                     /db_xref="taxon:2731255"
     Protein         <1..779
                     /product="stalk domain-containing protein"
     Region          <364..>563
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          517..596
                     /region_name="Big_6"
                     /note="Bacterial Ig domain; pfam17936"
                     /db_xref="CDD:465576"
     Region          672..775
                     /region_name="Cu_amine_oxidN1"
                     /note="Copper amine oxidase N-terminal domain; pfam07833"
                     /db_xref="CDD:400265"
ORIGIN      
        1 tavpaekfpn aeaqdgyktv twtpaketvv nedqefkasa tkntkaeevt algglkpvdi
       61 avwkgdaitw angvaakeea kkdqiaalla aatvtdktdp artsdakgef egtllvtfed
      121 qstlevenqm lyvyesgdtk ptdkpvpsda atvtftrdea sikdwgqvsp iivkkgtavp
      181 aekfpnaeaq dgyktvtwtp aketvvnedq efkasatkqt ieetedviip ylptdpiptk
      241 gsddkpipsd yitvtfkalp egagkvnvkd ksgetvlarv kpgtnladyt tisysanpgw
      301 tapaswdpal kvvisnetft atftknekst vptvnpvgkd denitgegtk gstitvvddk
      361 gqpiegkdgq pitttvddgg kweipvdklp ddkkptdvyv nqtedgkdps dpvkvpskeq
      421 savptvnpvg kddenitgeg tkgstitvvd dkgqpiegkd gqpiattvdd ggkweipvdk
      481 lpddkkptdv yvnqtedgkd psdpvkveak vddnnsatpa indviegdkv itgkgepgad
      541 ivvtddngni igetkvnddg twsvivpdgk epkagdvira tqteegktpt sattvvkery
      601 tpgevdepii rgrdhktpty pvytvvpgkt gqgstvidkl wyifhideyd yqevrnykst
      661 dhkmdvtpvi rndrtmlplr yvaeaigadv nwdaktrtat ftkdgltavi qidsdeivls
      721 ngktikmdak plnindrilv pvtnvanvfg ltngntldgv dqdiewdgea rtatiyirr
//
LOCUS       WP_235932859             230 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Peptoniphilus faecalis].
ACCESSION   WP_235932859
VERSION     WP_235932859.1
KEYWORDS    RefSeq.
SOURCE      Peptoniphilus faecalis
  ORGANISM  Peptoniphilus faecalis
            Bacteria; Bacillati; Bacillota; Tissierellia; Tissierellales;
            Peptoniphilaceae; Peptoniphilus.
REFERENCE   1  (residues 1 to 230)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Peptoniphilus faecalis"
                     /db_xref="taxon:2731255"
     Protein         1..>230
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          1..>216
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 mklviaekps vavaiakvig artrkngyye gngyivswcv ghliqmaspd kidekwkkws
       61 idtlpiipee yiyevskstk kqygvlkkll ndknidtvin acdagregel ifrlvynqak
      121 ckkkiqrlwi ssmenkaied gfrnlrdgen fedlyrsasa raiadwlvgm nlsrlysciy
      181 ketysvgrvq tptlyliakr dseinlfkkq kyytvdlsyg glklvsdrid
//
LOCUS       WP_235932899             170 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5004 domain-containing protein [Flagellimonas sediminis].
ACCESSION   WP_235932899
VERSION     WP_235932899.1
KEYWORDS    RefSeq.
SOURCE      Flagellimonas sediminis
  ORGANISM  Flagellimonas sediminis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flagellimonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027710.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16395.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Flagellimonas sediminis"
                     /db_xref="taxon:2696468"
     Protein         1..170
                     /product="DUF5004 domain-containing protein"
                     /calculated_mol_wt=19049
     Region          20..168
                     /region_name="DUF5004"
                     /note="Domain of unknown function (DUF5004); pfam16395"
                     /db_xref="CDD:406727"
ORIGIN      
        1 mkflnvmtll lggamlfscn sesenncpen ftgallaeee plvgewtlsg vmsakeidlt
       61 dddtdnplkd ifaqydecek dvvyifktdr sytyevgrnv ddcdysvpsr gtwqlrsknl
      121 slvtscqlyi talefneeat efsysniyni tdvdggiiqt sieftytlvp
//
LOCUS       WP_235932932             127 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Acidiluteibacter ferrifornacis].
ACCESSION   WP_235932932
VERSION     WP_235932932.1
KEYWORDS    RefSeq.
SOURCE      Acidiluteibacter ferrifornacis
  ORGANISM  Acidiluteibacter ferrifornacis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Cryomorphaceae; Acidiluteibacter.
REFERENCE   1  (residues 1 to 127)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07883.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Acidiluteibacter ferrifornacis"
                     /db_xref="taxon:2692424"
     Protein         1..127
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=13855
     Region          49..126
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 mkrvliiasl ltimvgcktt ectmskcdkg eksgiesyfk eqkavqtsvl fsgeqgktia
       61 lkieageklk ehtspvdafl icvkgegfya tekgdttamk sgdyvfiead lkhevvaeke
      121 shfllik
//
LOCUS       WP_235932988              98 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Paragemmobacter ruber].
ACCESSION   WP_235932988
VERSION     WP_235932988.1
KEYWORDS    RefSeq.
SOURCE      Paragemmobacter ruber
  ORGANISM  Paragemmobacter ruber
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Paragemmobacter.
REFERENCE   1  (residues 1 to 98)
  AUTHORS   Ren,J., Sainsbury,S., Nettleship,J.E., Saunders,N.J. and Owens,R.J.
  TITLE     The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals
            a novel protein fold incorporating a helix-turn-helix motif
  JOURNAL   Proteins 78 (7), 1798-1802 (2010)
   PUBMED   20196080
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013540.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01381.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Paragemmobacter ruber"
                     /db_xref="taxon:1985673"
     Protein         1..98
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=10659
     Region          5..91
                     /region_name="NadS"
                     /note="NadS family protein; NF041265"
                     /db_xref="CDD:469165"
     Region          36..>75
                     /region_name="YiaG"
                     /note="DNA-binding transcriptional regulator YiaG,
                     XRE-type HTH domain [Transcription]; COG2944"
                     /db_xref="CDD:442187"
ORIGIN      
        1 mseafdrimq rlkeaeayln gqtsgsnthh idvptpdvra irastglsqa dfarsigvsk
       61 gtllnweqsr rtidgppaps srssprnpas fvqwmlhp
//
LOCUS       WP_235933106             377 aa            linear   BCT 02-MAR-2025
DEFINITION  PAS-domain containing protein [Paragemmobacter ruber].
ACCESSION   WP_235933106
VERSION     WP_235933106.1
KEYWORDS    RefSeq.
SOURCE      Paragemmobacter ruber
  ORGANISM  Paragemmobacter ruber
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Paragemmobacter.
REFERENCE   1  (residues 1 to 377)
  AUTHORS   Hefti,M.H., Francoijs,K.J., de Vries,S.C., Dixon,R. and Vervoort,J.
  TITLE     The PAS fold. A redefinition of the PAS domain based upon
            structural prediction
  JOURNAL   Eur J Biochem 271 (6), 1198-1208 (2004)
   PUBMED   15009198
REFERENCE   2  (residues 1 to 377)
  AUTHORS   Ponting,C.P. and Aravind,L.
  TITLE     PAS: a multifunctional domain family comes to light
  JOURNAL   Curr Biol 7 (11), R674-R677 (1997)
   PUBMED   9382818
REFERENCE   3  (residues 1 to 377)
  AUTHORS   Zhulin,I.B., Taylor,B.L. and Dixon,R.
  TITLE     PAS domain S-boxes in Archaea, Bacteria and sensors for oxygen and
            redox
  JOURNAL   Trends Biochem Sci 22 (9), 331-333 (1997)
   PUBMED   9301332
REFERENCE   4  (residues 1 to 377)
  AUTHORS   Borgstahl,G.E., Williams,D.R. and Getzoff,E.D.
  TITLE     1.4 A structure of photoactive yellow protein, a cytosolic
            photoreceptor: unusual fold, active site, and chromophore
  JOURNAL   Biochemistry 34 (19), 6278-6287 (1995)
   PUBMED   7756254
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024267.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12860.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Paragemmobacter ruber"
                     /db_xref="taxon:1985673"
     Protein         1..377
                     /product="PAS-domain containing protein"
                     /calculated_mol_wt=41260
     Region          115..368
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
ORIGIN      
        1 msfwlwfefl tiaalgaals lliltfvpqp aahgadpaiv alaerlplal wrldpegkvi
       61 wsndayrala paagdppggl aegrislpig gearwfevtv qdgigmarpl ddlvraeahl
      121 rdmvqamakt faqlstglav fdhtrhlqsf npaladltgl speflsrrps lvamldvmrd
      181 rnmvpepkdw khwrqqiadm eraaasgqfe dtwalpggqt yrvsgrrhpd gglalmiddi
      241 sseiirsrry radlelsqrv vdtleegitv faptgqlvms nrayallwgh dpgerlatvs
      301 fsqlaahwrs vsapttlwae aeefaarldd raawqaearl ldgrlvlcrf aplsdgatla
      361 gfrlvqadaa pralias
//
LOCUS       WP_235933219             163 aa            linear   BCT 02-MAR-2025
DEFINITION  chemotaxis protein CheW [Paragemmobacter ruber].
ACCESSION   WP_235933219
VERSION     WP_235933219.1
KEYWORDS    RefSeq.
SOURCE      Paragemmobacter ruber
  ORGANISM  Paragemmobacter ruber
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Paragemmobacter.
REFERENCE   1  (residues 1 to 163)
  AUTHORS   Bilwes,A.M., Alex,L.A., Crane,B.R. and Simon,M.I.
  TITLE     Structure of CheA, a signal-transducing histidine kinase
  JOURNAL   Cell 96 (1), 131-141 (1999)
   PUBMED   9989504
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013731.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01584.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Paragemmobacter ruber"
                     /db_xref="taxon:1985673"
     Protein         1..163
                     /product="chemotaxis protein CheW"
                     /GO_process="GO:0006935 - chemotaxis [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=17353
     Region          7..146
                     /region_name="CheW_like"
                     /note="CheW-like domain. CheW proteins are part of the
                     chemotaxis signalling mechanism in bacteria. CheW
                     interacts with the methyl accepting chemotaxis proteins
                     (MCPs) and relays signals to CheY, which affects flageller
                     rotation. This family includes CheW and...; cl00256"
                     /db_xref="CDD:469692"
ORIGIN      
        1 mtdsadvvtf nadqalyavp vsrvqeildl rpvaampnap ayllgiidlr genipvvdlr
       61 rllgrpetad ttqsrilvvw lakgaeravi giktdrviev trlddaevkp lteaellgwt
      121 gsavagigrc rgevvslidl drlfdrvdlg aqalgaqala dva
//
LOCUS       WP_235933238             446 aa            linear   BCT 02-MAR-2025
DEFINITION  2TM domain-containing protein [Flavobacterium solisilvae].
ACCESSION   WP_235933238
VERSION     WP_235933238.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium solisilvae
  ORGANISM  Flavobacterium solisilvae
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024636.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13239.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Flavobacterium solisilvae"
                     /db_xref="taxon:1852019"
     Protein         1..446
                     /product="2TM domain-containing protein"
                     /calculated_mol_wt=51805
     Region          4..341
                     /region_name="LytS"
                     /note="Sensor histidine kinase, LytS/YehU family [Signal
                     transduction mechanisms]; COG3275"
                     /db_xref="CDD:442506"
     Region          363..436
                     /region_name="2TM"
                     /note="2TM domain; pfam13239"
                     /db_xref="CDD:463815"
ORIGIN      
        1 miqrlirefi kavviafvif mvllgirfvv gssiafdytm ltnfgytmmy gvvlylinaa
       61 vfmrldkifk adrftpkrii vgfissfvvt ivaifllrvf edviiegstf aaffkketma
      121 nylvasvitl ivtlaihafy fykaynenrv keqkviagta sakfeslknq idphflfnsl
      181 nvlsslieen pdnaqrftts lskiyryvle qkdkelvsve eelqfaktym nllkmrfens
      241 isyeiptdfe naeakvvpls lqlllentik hnvvseqkpl hikiyienny liiennlqkk
      301 evlqdrkgvg lqnivnryal iserkvlvee tsevfkvkip iltkqivime tqniynenma
      361 yakakdrvdq lkgfygnlis ycfvipilif inlsttkfqw fwfpmlgwgm gvtfhalevf
      421 gygknweerk ireilekdnn qnnkwk
//
LOCUS       WP_235933301             119 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6477 family protein [Paragemmobacter ruber].
ACCESSION   WP_235933301
VERSION     WP_235933301.1
KEYWORDS    RefSeq.
SOURCE      Paragemmobacter ruber
  ORGANISM  Paragemmobacter ruber
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Paragemmobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040436.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20083.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Paragemmobacter ruber"
                     /db_xref="taxon:1985673"
     Protein         1..119
                     /product="DUF6477 family protein"
                     /calculated_mol_wt=12374
     Region          25..108
                     /region_name="DUF6477"
                     /note="Family of unknown function (DUF6477); pfam20083"
                     /db_xref="CDD:466285"
ORIGIN      
        1 mppipalspa llpvaapmpa gggprrprll mdaarhglad yrrgrdlprl iggcptsaqa
       61 iaeleareee aerarragsp awscvrhvev lialmaeral laeglaartg mvaggadlr
//
LOCUS       WP_235933418             477 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Paragemmobacter ruber].
ACCESSION   WP_235933418
VERSION     WP_235933418.1
KEYWORDS    RefSeq.
SOURCE      Paragemmobacter ruber
  ORGANISM  Paragemmobacter ruber
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Paragemmobacter.
REFERENCE   1  (residues 1 to 477)
  AUTHORS   Li,Y., Bahti,P., Shaw,N., Song,G., Chen,S., Zhang,X., Zhang,M.,
            Cheng,C., Yin,J., Zhu,J.Y., Zhang,H., Che,D., Xu,H., Abbas,A.,
            Wang,B.C. and Liu,Z.J.
  TITLE     Crystal structure of a novel non-Pfam protein AF1514 from
            Archeoglobus fulgidus DSM 4304 solved by S-SAD using a Cr X-ray
            source
  JOURNAL   Proteins 71 (4), 2109-2113 (2008)
   PUBMED   18361456
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024977.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13589.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Paragemmobacter ruber"
                     /db_xref="taxon:1985673"
     Protein         1..477
                     /product="ATP-binding protein"
                     /calculated_mol_wt=52401
     Region          45..173
                     /region_name="HATPase"
                     /note="Histidine kinase-like ATPase domain; cl00075"
                     /db_xref="CDD:469604"
ORIGIN      
        1 mckttnaanv trviesesfm tspnrffggp tkdffvsmlt rdialddail dlvdnsvdga
       61 mrtrqdqrgt eqmyagcqcr ltisgttfei sdncggipka ylenafrlgr pkidldkgip
      121 tigvygigmk raifkiasea tveshsadaa vrvtytgdwm aseddwyvpf telgkdatlg
      181 vkitavtirp eisskftdpg fldgletqia ehfaylmkmg feiflnekki nprivqvvdg
      241 gagsvrpydy egvtdgvkmk vtigfyrklt reaeleeatq egdqpvdkag itlicnervi
      301 lhsdktnqtg wgvastpryh pqfraisgiv sfesddaskl pvsttkrdie hssalyikal
      361 nrcmdgiqif tsftnkwkgr eaetdqylqe ekftsartva lansegtvvr gsggaekvft
      421 pelpkpptkt tlrriafsre tseieqlgla lldnaralpg dvglaawtra lkevgkp
//
LOCUS       WP_235933508             120 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5318 family protein [Corynebacterium qintianiae].
ACCESSION   WP_235933508
VERSION     WP_235933508.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium qintianiae
  ORGANISM  Corynebacterium qintianiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (residues 1 to 120)
  AUTHORS   Holm,L., Laiho,A., Toronen,P. and Salgado,M.
  TITLE     DALI shines a light on remote homologs: One hundred discoveries
  JOURNAL   Protein Sci 32 (1), e4519 (2023)
   PUBMED   36419248
REFERENCE   2  (residues 1 to 120)
  AUTHORS   Grishin,N.V.
  TITLE     C-terminal domains of Escherichia coli topoisomerase I belong to
            the zinc-ribbon superfamily
  JOURNAL   J Mol Biol 299 (5), 1165-1177 (2000)
   PUBMED   10873443
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036456.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17249.8
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Corynebacterium qintianiae"
                     /db_xref="taxon:2709392"
     Protein         1..120
                     /product="DUF5318 family protein"
                     /calculated_mol_wt=13582
     Region          8..110
                     /region_name="DUF5318"
                     /note="Family of unknown function (DUF5318); pfam17249"
                     /db_xref="CDD:407364"
ORIGIN      
        1 mfaysrevsh ewrrrmtlkd frkgrvrped vcdadfllra aadhhgtvtp racpicgepm
       61 revswiygdn lgrrsgtars eeeidrivse vgpvtvhvve vcghcrwnhl lkevtavpvv
//
LOCUS       WP_235933533             130 aa            linear   BCT 02-MAR-2025
DEFINITION  sterol carrier family protein [Corynebacterium qintianiae].
ACCESSION   WP_235933533
VERSION     WP_235933533.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium qintianiae
  ORGANISM  Corynebacterium qintianiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (residues 1 to 130)
  AUTHORS   Shahine,A., Littler,D., Brammananath,R., Chan,P.Y., Crellin,P.K.,
            Coppel,R.L., Rossjohn,J. and Beddoe,T.
  TITLE     A structural and functional investigation of a novel protein from
            Mycobacterium smegmatis implicated in mycobacterial macrophage
            survivability
  JOURNAL   Acta Crystallogr D Biol Crystallogr 70 (Pt 9), 2264-2276 (2014)
   PUBMED   25195741
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036504.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17844.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Corynebacterium qintianiae"
                     /db_xref="taxon:2709392"
     Protein         1..130
                     /product="sterol carrier family protein"
                     /calculated_mol_wt=13708
     Region          31..124
                     /region_name="SCP_3"
                     /note="Bacterial SCP ortholog; pfam17844"
                     /db_xref="CDD:465530"
ORIGIN      
        1 msarksdpva tretveavaa wlrgetedap prkeladacr ttartlaeel pghavelrvp
       61 pfvavqcidg prhtrgtppn vvemspetwl rvatgiesfr dalsagrida sgsrasevar
      121 glpviaidag
//
LOCUS       WP_235933561             550 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Corynebacterium
            qintianiae].
ACCESSION   WP_235933561
VERSION     WP_235933561.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium qintianiae
  ORGANISM  Corynebacterium qintianiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Corynebacterium qintianiae"
                     /db_xref="taxon:2709392"
     Protein         1..550
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=58543
     Region          54..519
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mvrrlalrav sivaavtivg tslaacsgid agtteeqagn hfgyqvpvel sttnagtevg
       61 asefaqmlsg rlypgvfvpg psgqvipntd lvraqalpga qriveyslsa easfsdgapv
      121 tctdyllayt agknpelfgs hmplfqdver ldctpgaknf dlvfaegqga rwrdlfgagt
      181 vlpahavagk lgkdeaalna dltsgsvdvl rpiaevwreg fnlaqfdpem qvsfgpykia
      241 dvgeagqvtl tanenyygda pltkeivvwp gsadsaelrn qdnlriadld epdpdwldvd
      301 aegnaldvtt tvgsltdslt fesfgpwsyy errqalakcv dpravaaass gasgvevpat
      361 svhlvshndp larrfddiva prmdvdvega kaaaglelrv gyvhpskrma amvesirasc
      421 epagitvvdv tkstgegktl rdlsriekge wgedagvege idamlrpvnp qteysapgsr
      481 aqdldamrkk eaelwttlps iplaaqprsf avdrnlanvi vytgptgigw nmdrwqlrpe
      541 sadktaeptn
//
LOCUS       WP_235933610              96 aa            linear   BCT 02-MAR-2025
DEFINITION  recombinase family protein [Corynebacterium qintianiae].
ACCESSION   WP_235933610
VERSION     WP_235933610.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium qintianiae
  ORGANISM  Corynebacterium qintianiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (residues 1 to 96)
  AUTHORS   Yang,W. and Steitz,T.A.
  TITLE     Crystal structure of the site-specific recombinase gamma delta
            resolvase complexed with a 34 bp cleavage site
  JOURNAL   Cell 82 (2), 193-207 (1995)
   PUBMED   7628011
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012464.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00239.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Corynebacterium qintianiae"
                     /db_xref="taxon:2709392"
     Protein         1..96
                     /product="recombinase family protein"
                     /GO_function="GO:0000150 - DNA strand exchange activity
                     [Evidence IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /calculated_mol_wt=10293
     Region          <12..>95
                     /region_name="SpoIVCA"
                     /note="Site-specific DNA recombinase SpoIVCA/DNA invertase
                     PinE [Replication, recombination and repair]; COG1961"
                     /db_xref="CDD:441564"
ORIGIN      
        1 mregqtysak adpiaklmlg lmgsvaefer siikerqaeg iarakargvy kgrakvltda
       61 qvaqargwva ngvpkaevar rigigrttly tylaks
//
LOCUS       WP_235933788             418 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Agromyces humi].
ACCESSION   WP_235933788
VERSION     WP_235933788.1
KEYWORDS    RefSeq.
SOURCE      Agromyces humi
  ORGANISM  Agromyces humi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Agromyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Agromyces humi"
                     /db_xref="taxon:1766800"
     Protein         1..418
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=45886
     Region          24..399
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 msdtpgatap agtdgaeter pltiligadt fapdvngaar faerlaaglv erghdvhvma
       61 paanrkhgtw kevhegqeit ahrlyswrwy phdwlrfalp wrikqnssrv idavkpdvvh
      121 fqshiivgrg lsleaqkrgi riigtnhfmp enmleftllp kawqewavgl awkaagrtfg
      181 raeavttptr rasqflekht glrgvhaisc gidahkyspd wsprtenril fvgrvtgekq
      241 idvllraitl lpaeldakve ivgggdqlrn lqhmaselgi anrvtftgyv tddelreayh
      301 rasvlampsi aelqsivtme amasalpvva anamalphlv hdgengylfd pgspddlaak
      361 lrtvleaspe eyrtlkegsl rliaahdiqr tistfeslyr grpvtdpvtd vapaalpe
//
LOCUS       WP_235933825             270 aa            linear   BCT 02-MAR-2025
DEFINITION  Wadjet anti-phage system protein JetD domain-containing protein
            [Agromyces humi].
ACCESSION   WP_235933825
VERSION     WP_235933825.1
KEYWORDS    RefSeq.
SOURCE      Agromyces humi
  ORGANISM  Agromyces humi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Agromyces.
REFERENCE   1  (residues 1 to 270)
  AUTHORS   Doron,S., Melamed,S., Ofir,G., Leavitt,A., Lopatina,A., Keren,M.,
            Amitai,G. and Sorek,R.
  TITLE     Systematic discovery of antiphage defense systems in the microbial
            pangenome
  JOURNAL   Science 359 (6379) (2018)
   PUBMED   29371424
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09983.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Agromyces humi"
                     /db_xref="taxon:1766800"
     Protein         1..270
                     /product="Wadjet anti-phage system protein JetD
                     domain-containing protein"
                     /calculated_mol_wt=29638
     Region          <13..270
                     /region_name="COG4924"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:443952"
ORIGIN      
        1 mrdagavlts vtlraacrla dgdvdvvida vgwlnenrdm sewttrqlpv pgmhtkwlgs
       61 hekllrslvg rdisletrpr lsvahftytd pgylatgarr hdawttgdrh avayrprnil
      121 ivenrdcrlw fpampdtvvv egggkaaass lsgiewitaa erlvywgdid adgfaildnl
      181 rsvlerqgir vdsilmdaaa rgryadlgvd rdrrgalltp starlsnltf neaeayasia
      241 tagsvpfrri eqekinlada kaalievlnr
//
LOCUS       WP_235933916              96 aa            linear   BCT 02-MAR-2025
DEFINITION  alcohol dehydrogenase catalytic domain-containing protein, partial
            [Agromyces humi].
ACCESSION   WP_235933916
VERSION     WP_235933916.1
KEYWORDS    RefSeq.
SOURCE      Agromyces humi
  ORGANISM  Agromyces humi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Agromyces.
REFERENCE   1  (residues 1 to 96)
  AUTHORS   Taneja,B. and Mande,S.C.
  TITLE     Conserved structural features and sequence patterns in the GroES
            fold family
  JOURNAL   Protein Eng 12 (10), 815-818 (1999)
   PUBMED   10556240
REFERENCE   2  (residues 1 to 96)
  AUTHORS   Murzin,A.G.
  TITLE     Structural classification of proteins: new superfamilies
  JOURNAL   Curr Opin Struct Biol 6 (3), 386-394 (1996)
   PUBMED   8804825
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08240.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Agromyces humi"
                     /db_xref="taxon:1766800"
     Protein         1..>96
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
     Region          23..>96
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
ORIGIN      
        1 mtegvvagtt agsatrtrti tgavleelgr grpfaasrpi tvgeleldpp gldellvrie
       61 aagvchsdls vvdgsrprpv pmllgheaag iveavg
//
LOCUS       WP_235933941             440 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Agromyces humi].
ACCESSION   WP_235933941
VERSION     WP_235933941.1
KEYWORDS    RefSeq.
SOURCE      Agromyces humi
  ORGANISM  Agromyces humi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Agromyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Agromyces humi"
                     /db_xref="taxon:1766800"
     Protein         1..440
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=46188
     Region          40..409
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(67,121..122,124..126,129,153,156..157,160,240,
                     243..244,247..249,252,284,288,335..336,340,344,360,
                     363..364,367..368,371)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340883"
ORIGIN      
        1 mtsatrptrt ptprsvqavy ytltlgntla asfiwgintl flldagltnl eafaanaffs
       61 agmflfeipt gvvadtlgrr asyllgtvtl avttvlywll wvwespfwaw avvsillglg
      121 ftffsgavda wlvdalrate yrgsletvfg ramivggaam lagsvlggvi aqltnlgvpf
      181 lirgavlavm fvvaaltmrd lgftpergeg pikatgtvlr asvkyglgnp pvrwlmlatp
      241 ftagvgiyvf yalqpyllel wgdegaysia glaaailsga givggliapf vrrlfhkrts
      301 aillatvssa vvlialsftn nfwvaivlla vwgiassvdd pvhraylndm ipskqratvl
      361 sfdsllgsag gavfqpilgr sadlsgyags mlwsglitav aapfvllsra qhptadtvve
      421 vtsappagde patdaatptp
//
LOCUS       WP_235933935             420 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Paramicrobacterium
            chengjingii].
ACCESSION   WP_235933935
VERSION     WP_235933935.1
KEYWORDS    RefSeq.
SOURCE      Paramicrobacterium chengjingii
  ORGANISM  Paramicrobacterium chengjingii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Paramicrobacterium.
REFERENCE   1  (residues 1 to 420)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 420)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 420)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 420)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Paramicrobacterium chengjingii"
                     /db_xref="taxon:2769067"
     Protein         1..420
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=43601
     Region          35..419
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mmrktgival gaiaalalag csgsaegasd dasaeirvwl vgtdtpdear nylketfeee
       61 npgstlviee qqwnglvdky ttalsgsdsp dvveigntqa aaftsagaft dltdkydelg
      121 gdsllqgfve agtyedkiya ypyysgarvv fytpqifgge vpttldeyvd agiamkeagt
      181 asgiyapgkd wynvlpfvwe nggyvaeqqd dgtwkagfss vggvagleqm qsiytsatsa
      241 pkdgdetnaq vpfcegdvgf lsapswfqws lkaeadadtp gcpdtygkdv tafalpgkdg
      301 gaaaafaggs niavaansah qdlaykalqi mlspgyqell aakglipats eaadalpddd
      361 vtaaaaaaae narltpaapk wadveasevi knalvkiaqg sdvttiasnl dseieeilns
//
LOCUS       WP_235933960             733 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase 53 family protein [Agromyces humi].
ACCESSION   WP_235933960
VERSION     WP_235933960.1
KEYWORDS    RefSeq.
SOURCE      Agromyces humi
  ORGANISM  Agromyces humi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Agromyces.
REFERENCE   1  (residues 1 to 733)
  AUTHORS   Coutinho,P.M., Deleury,E., Davies,G.J. and Henrissat,B.
  TITLE     An evolving hierarchical family classification for
            glycosyltransferases
  JOURNAL   J Mol Biol 328 (2), 307-317 (2003)
   PUBMED   12691742
REFERENCE   2  (residues 1 to 733)
  AUTHORS   Ryttersgaard,C., Lo Leggio,L., Coutinho,P.M., Henrissat,B. and
            Larsen,S.
  TITLE     Aspergillus aculeatus beta-1,4-galactanase: substrate recognition
            and relations to other glycoside hydrolases in clan GH-A
  JOURNAL   Biochemistry 41 (51), 15135-15143 (2002)
   PUBMED   12484750
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019365.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07745.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..733
                     /organism="Agromyces humi"
                     /db_xref="taxon:1766800"
     Protein         1..733
                     /product="glycosyl hydrolase 53 family protein"
                     /GO_function="GO:0015926 - glucosidase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=75324
     Region          51..439
                     /region_name="GanB"
                     /note="Arabinogalactan endo-1,4-beta-galactosidase
                     [Carbohydrate transport and metabolism]; COG3867"
                     /db_xref="CDD:443076"
     Region          390..>599
                     /region_name="Chi1"
                     /note="Chitinase [Carbohydrate transport and metabolism];
                     COG3469"
                     /db_xref="CDD:442692"
     Region          450..503
                     /region_name="Big_4"
                     /note="Bacterial Ig-like domain (group 4); pfam07532"
                     /db_xref="CDD:400079"
ORIGIN      
        1 mqrqfrragv vafaaalatl vaapagasaa vasestvase pagpgdgpvd agifvqkvdg
       61 lapdfvngvd vstvlslees gvvfrdesga padlfdvlad dgvntvrirv wndpfdasdr
      121 gygggnvdva raveigerat aaglsvlvdf hysdfwadpa rqlapkawag ltdaetvtal
      181 hdftadalqs fedagvdvsm vqvgnetnng iagharagta idaqfaalvs agsaavrevl
      241 pdalvavhft npetpgryat yaaglasfgv dydvfassyy pywhgttqnl tsvlsqiatt
      301 ygkqvvvaet swartlddgd gypnvigadt itdqypasvq gqatalrdvi aavsavgdag
      361 igvfywepaw lpvgppsave anrllwerdg sgwatsaasd ydpvhvgeyy ggsawdnqal
      421 fawdgtpves lrtfeyartg avapreivsv eqvalsvtdg apvslpaait vtyndgtteh
      481 psvawsnavs wirgpgeyti pgttstglav easvtvlaan lvrngsfesa dlgawtltgp
      541 aartqtgdas dgdyavtfwn gtaytasatq ritgvpagty slqattqgtg spasdsrvls
      601 attsagtvsa plsftawnef htavvpnvvv gadgvveisa sfalsagawg vlddvrlvaa
      661 saavpvdtsd laaalaaaas vdrslytdas latldeavai gdvvmagsta tksdvkeatk
      721 lvekavkklk rvm
//
LOCUS       WP_235934102             304 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Paramicrobacterium chengjingii].
ACCESSION   WP_235934102
VERSION     WP_235934102.1
KEYWORDS    RefSeq.
SOURCE      Paramicrobacterium chengjingii
  ORGANISM  Paramicrobacterium chengjingii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Paramicrobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Paramicrobacterium chengjingii"
                     /db_xref="taxon:2769067"
     Protein         1..304
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=32702
     Region          23..158
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mariippvpg eprrplgprd sgdawvdgdr grfwgrygaa gliawdrrrg vllqhraews
       61 dqggtwglpg galhagesai dgalreahee agvpadhlvp rvtstftvgy wsyttvvaev
      121 sapfeavmnd hesialewvp vdsvasaplh pgfeaswpql rpllgrspql vvdaanvvgs
      181 rpdgwwrdrr aaatrlrdrl ealsntgiad eqvadlrwcp eiimvlegqa kgvensahvr
      241 vvnapgegdn eiveqvaali agqvesdvtv itsdrelaar aeelggrvhg aawllgrmda
      301 vadr
//
LOCUS       WP_235934071             136 aa            linear   BCT 02-MAR-2025
DEFINITION  SLBB domain-containing protein [Paramicrobacterium chengjingii].
ACCESSION   WP_235934071
VERSION     WP_235934071.1
KEYWORDS    RefSeq.
SOURCE      Paramicrobacterium chengjingii
  ORGANISM  Paramicrobacterium chengjingii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Paramicrobacterium.
REFERENCE   1  (residues 1 to 136)
  AUTHORS   Burroughs,A.M., Balaji,S., Iyer,L.M. and Aravind,L.
  TITLE     A novel superfamily containing the beta-grasp fold involved in
            binding diverse soluble ligands
  JOURNAL   Biol Direct 2, 4 (2007)
   PUBMED   17250770
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022007.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10531.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Paramicrobacterium chengjingii"
                     /db_xref="taxon:2769067"
     Protein         1..136
                     /product="SLBB domain-containing protein"
                     /calculated_mol_wt=13988
     Region          65..119
                     /region_name="SLBB"
                     /note="SLBB domain; pfam10531"
                     /db_xref="CDD:463136"
ORIGIN      
        1 mheraelsrr arrpkrlrlg agvavllmla glaaavvval vqegdhvsav aphntsstsi
       61 psviyvhvlg avqspglyql segarvmdav aaaggltdaa ddaainlarf vtdgeqvrvp
      121 evgegtqqeg tdeqgr
//
LOCUS       WP_235934188             383 aa            linear   BCT 02-MAR-2025
DEFINITION  1-acyl-sn-glycerol-3-phosphate acyltransferase [Sunxiuqinia
            indica].
ACCESSION   WP_235934188
VERSION     WP_235934188.1
KEYWORDS    RefSeq.
SOURCE      Sunxiuqinia indica
  ORGANISM  Sunxiuqinia indica
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia;
            Marinilabiliales; Prolixibacteraceae; Sunxiuqinia.
REFERENCE   1  (residues 1 to 383)
  AUTHORS   Neuwald,A.F.
  TITLE     Barth syndrome may be due to an acyltransferase deficiency
  JOURNAL   Curr Biol 7 (8), R465-R466 (1997)
   PUBMED   9259571
REFERENCE   2  (residues 1 to 383)
  AUTHORS   Bione,S., D'Adamo,P., Maestrini,E., Gedeon,A.K., Bolhuis,P.A. and
            Toniolo,D.
  TITLE     A novel X-linked gene, G4.5. is responsible for Barth syndrome
  JOURNAL   Nat Genet 12 (4), 385-389 (1996)
   PUBMED   8630491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013702.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01553.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Sunxiuqinia indica"
                     /db_xref="taxon:2692584"
     Protein         1..383
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /GO_function="GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=43952
     Region          18..>304
                     /region_name="PlsB"
                     /note="Glycerol-3-phosphate O-acyltransferase [Lipid
                     transport and metabolism]; COG2937"
                     /db_xref="CDD:442180"
ORIGIN      
        1 mnyddirpye dhevnhyinv llkddifqev lqfifqdenq raqakamlsk iqtveelqlt
       61 fmlslvtdwi ikkttcgvtw sgldqldksk sylfisnhrd iildaallny tivkagmntt
      121 eiaignnlli ydwivhavkl nrafvvkrnl parellmask klstyireai tnrnrsvwia
      181 qregrtkdgn dqtqqallkm lnlsndkdfv egfhelqivp lsisyerepc giskveeiyk
      241 resegfektq addlksmafg ltrpkgrvhf sfgkpidapl eefakaetan esvqqladyi
      301 deriyknykl wpnnylaadl mngkdehadk ieeatrdkfs ellqdlvdti gegdpkrqqe
      361 lfvkmyanpl lnaenavskk ana
//
LOCUS       WP_235934197             102 aa            linear   BCT 02-MAR-2025
DEFINITION  FHA domain-containing protein [Agromyces humi].
ACCESSION   WP_235934197
VERSION     WP_235934197.1
KEYWORDS    RefSeq.
SOURCE      Agromyces humi
  ORGANISM  Agromyces humi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Agromyces.
REFERENCE   1  (residues 1 to 102)
  AUTHORS   Pallen,M., Chaudhuri,R. and Khan,A.
  TITLE     Bacterial FHA domains: neglected players in the phospho-threonine
            signalling game?
  JOURNAL   Trends Microbiol 10 (12), 556-563 (2002)
   PUBMED   12564991
REFERENCE   2  (residues 1 to 102)
  AUTHORS   Durocher,D., Henckel,J., Fersht,A.R. and Jackson,S.P.
  TITLE     The FHA domain is a modular phosphopeptide recognition motif
  JOURNAL   Mol Cell 4 (3), 387-394 (1999)
   PUBMED   10518219
REFERENCE   3  (residues 1 to 102)
  AUTHORS   Hofmann,K. and Bucher,P.
  TITLE     The FHA domain: a putative nuclear signalling domain found in
            protein kinases and transcription factors
  JOURNAL   Trends Biochem Sci 20 (9), 347-349 (1995)
   PUBMED   7482699
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012708.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00498.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Agromyces humi"
                     /db_xref="taxon:1766800"
     Protein         1..102
                     /product="FHA domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=10432
     Region          <8..88
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cl00062"
                     /db_xref="CDD:469597"
     Site            order(10..11,35..36,38,57..58)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:438714"
ORIGIN      
        1 mlvlrpvvlg rdpvadagrp gaatirlvdp arsvskthal vevvddrvmv tdlhstngsr
       61 vltpegdvve ldpglgatvv ggstillgef avtldrapln sv
//
LOCUS       WP_235934198             978 aa            linear   BCT 02-MAR-2025
DEFINITION  TIM-barrel domain-containing protein [Agromyces humi].
ACCESSION   WP_235934198
VERSION     WP_235934198.1
KEYWORDS    RefSeq.
SOURCE      Agromyces humi
  ORGANISM  Agromyces humi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Agromyces.
REFERENCE   1  (residues 1 to 978)
  AUTHORS   Henrissat,B.
  TITLE     Glycosidase families
  JOURNAL   Biochem Soc Trans 26 (2), 153-156 (1998)
   PUBMED   9649738
REFERENCE   2  (residues 1 to 978)
  AUTHORS   Henrissat,B.
  TITLE     A classification of glycosyl hydrolases based on amino acid
            sequence similarities
  JOURNAL   Biochem J 280 (Pt 2) (Pt 2), 309-316 (1991)
   PUBMED   1747104
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01055.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Agromyces humi"
                     /db_xref="taxon:1766800"
     Protein         1..978
                     /product="TIM-barrel domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=102843
     Region          97..198
                     /region_name="AGL_N"
                     /note="Alpha-glucosidase, N-terminal; pfam16338"
                     /db_xref="CDD:465098"
     Region          210..311
                     /region_name="GH31_N"
                     /note="N-terminal domain of glycosyl hydrolase family 31
                     (GH31); cd14752"
                     /db_xref="CDD:270212"
     Region          309..640
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
     Site            order(374..375,423,425..426,460,473,476,530,532)
                     /site_type="active"
                     /db_xref="CDD:269891"
     Site            order(425,476)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:269891"
     Region          686..761
                     /region_name="DUF5110"
                     /note="Domain of unknown function (DUF5110); pfam17137"
                     /db_xref="CDD:465360"
     Region          843..921
                     /region_name="NPCBM_assoc"
                     /note="NPCBM-associated, NEW3 domain of
                     alpha-galactosidase; pfam10633"
                     /db_xref="CDD:431406"
ORIGIN      
        1 milhrtpppg grrrtalagv calvgaglla tagvspalaa tqmttaagst aaaasgtaap
       61 sattpitpka vtpevpvdpa gtplgavstv eqdgasvtls aehgamritf lddrtfrlea
      121 dpsgsftdpa ntpqgdpart adivvgddtf dgadvavtgt esdsgsiaia tadvtvtidr
      181 atgqssatra dgtviwseta pitfgaasat qhlapidgeq figggmqngr svhtgatini
      241 arnfdwdddg ypnavpyyms sngygvlrnt fargsydfaa htttheerrf dayyfvgdyk
      301 aslesytqlt grpllppvya leygdadcyn rsnpgysssg ygdpqntkqr tpqalniakq
      361 fveqdmpagw mlvndgygce yqqlpetvds iedqtdlkvg lwtqrsltnq efevgeagvr
      421 lrkldvawvg sgyrqaltgc eaahdgieqy sdargtalmv egwagaqrcg mqwtgdhsgn
      481 ldavrwqvsa ltgagnsgla fttgdvdgif ggsaesyvrd lqwkafapal ysmsgwaqtd
      541 krpwlygdea tainreylql rqrlmpyvys laeeshrtgv pmmrsvaley psdpgaysve
      601 annefllgdd ylvapvftdt dvrngiylpa gdqwvdywtg alheggtvld ghpapldrmp
      661 ifvragavip qgvlernasl vpedapitlv typqgesefa lyeddevtra yadgesstqr
      721 ftvdapkagk tgtvkielgt rdgdydgkad arpyrveaht gsepklvklg srtlprvdda
      781 aalddgpgwt yeadraggvv listgeiasd asarltltat sgvggqeada aaasvavela
      841 drvfqgeqtt vtatfrntgt kakadvvltp aapegwtlvs atgdhagtvk kggeataeft
      901 fevtdaaaad lqtvtvtaay tsqrqprtvs ganqlyvafg slagafnavs itdlatakag
      961 nfdgggasfs agfdelga
//
LOCUS       WP_235934243             442 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Paramicrobacterium chengjingii].
ACCESSION   WP_235934243
VERSION     WP_235934243.1
KEYWORDS    RefSeq.
SOURCE      Paramicrobacterium chengjingii
  ORGANISM  Paramicrobacterium chengjingii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Paramicrobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Paramicrobacterium chengjingii"
                     /db_xref="taxon:2769067"
     Protein         1..442
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47812
     Region          38..431
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(48..49,52..53,56,89,144..145,147..149,152,171,
                     174..175,178,262,265..266,269..271,274,304,308,363..364,
                     368,372,388,391..392,395..396,399)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340899"
ORIGIN      
        1 mdsttgmndd alrlkpdlsn wdpeqpetwd srlawrtlwi ttytmilafa twylvsaiap
       61 rlndigysls dqelywlval pglagglirl ifmflppllg trtlvalsal lllvpllgwt
      121 fvvrdptipf wflmllsfsa gvgggsfsgl mastsyffpk rlsgtalglq agignfgigi
      181 vqflvpwvvg fgllgtaalt pqsqtdgtlv wlhngglvmv pwvllaaiag ivflrrvpvk
      241 anfrqqmnif glkhtwimsa lylmsfgafs glaaqtglii ahvyggfdna pnplawawig
      301 pllgagiraa cgplcdrwgg akftfiggag mtagtivtlf fltpssvdef wgfltgmlli
      361 fffsgfanag tfkqmpmift kvqaggtigw tasigsfgpf lvgmalsvms pmvffiicav
      421 wcgfctglaw wyyarpraek ps
//
LOCUS       WP_235934317             544 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-galactosidase, partial [Agromyces humi].
ACCESSION   WP_235934317
VERSION     WP_235934317.1
KEYWORDS    RefSeq.
SOURCE      Agromyces humi
  ORGANISM  Agromyces humi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Agromyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013469.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01301.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Agromyces humi"
                     /db_xref="taxon:1766800"
     Protein         1..>544
                     /product="beta-galactosidase"
                     /EC_number="3.2.1.23"
     Region          51..393
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
ORIGIN      
        1 mttapppaaa ptpltvthrp hdrplrrpam sntvdrhdri altnryveva grpaipvsge
       61 lhysrvprde weerlrlmrs ggitvvatyv fwnhhepvrg rrdftgaldv gafvdlcahv
      121 gldvvlrlgp wahgearngg fpdwvqeapv rhrtddpayl alvdewfaal ggefasrcgp
      181 atnvvgiqle nelydqpghl vtlkaiarrh givapiwtat awggadlpag evlplyggyg
      241 dgfwvdadqp wdttfrehff fshtwddpgi gadlrdhpgi gghaegptpr lpspdfpaat
      301 celgggmata yhrrpllgal diaavahdki gngsgwqgyy mygggvnprp alqesqatgy
      361 pndlpefdyd fhapigaagv lapshaelrr qhaflvafge rladmpstlp dvlptgvddg
      421 etlrwairsd gasawvfitw qqphvpleps rgarfsigle rervefprvp vdvapgtvah
      481 wpvnlevngv rvrwltaspl tvlgaddgdd dgptlvvvae tgipvelgvd tatvtvtdaa
      541 gatr
//
LOCUS       WP_235934354             457 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Paramicrobacterium chengjingii].
ACCESSION   WP_235934354
VERSION     WP_235934354.1
KEYWORDS    RefSeq.
SOURCE      Paramicrobacterium chengjingii
  ORGANISM  Paramicrobacterium chengjingii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Paramicrobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Paramicrobacterium chengjingii"
                     /db_xref="taxon:2769067"
     Protein         1..457
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=46843
     Region          32..423
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(35..36,39..40,43,74,124..125,127..129,132,152,
                     155..156,159,244,278..279,282..284,287,315,319,372..373,
                     377,381,397,400..401,404..405,408)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mtgertiaen reaagilnrr yrwvttgtva lvffsafesl avttvmpvvs adldgealya
       61 lafagplatg iigmvgagtw adrrgpvvpl yasvaafvig lliagvawtm dlfvvgrlvq
      121 glggggltva lyvvvarvfp aelhpkvfaa faaawvipsl vgpfisgiva etlswhwvfl
      181 gvvglvival amiipslrsi erthgdgarf parrlvlatl aaggvlglsl lgrlptvgwp
      241 lalgfgalav iavarlmprg vlrathglps vialrglaaa afigaevyvp ylltreyafs
      301 psvaglaltf aalswsgast vqgriglrle svvfvrigal lilvstvtaa ltaalhlspv
      361 vliigwtiag agmglvyprt simvltystt vdqgfnssam siadslggal alavtgilft
      421 vagsglwafa avfalavvls igasavaprv tasvmrg
//
LOCUS       WP_235934374             442 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent monooxygenase [Paramicrobacterium chengjingii].
ACCESSION   WP_235934374
VERSION     WP_235934374.1
KEYWORDS    RefSeq.
SOURCE      Paramicrobacterium chengjingii
  ORGANISM  Paramicrobacterium chengjingii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Paramicrobacterium.
REFERENCE   1  (residues 1 to 442)
  AUTHORS   Schreuder,H.A., van der Laan,J.M., Swarte,M.B., Kalk,K.H., Hol,W.G.
            and Drenth,J.
  TITLE     Crystal structure of the reduced form of p-hydroxybenzoate
            hydroxylase refined at 2.3 A resolution
  JOURNAL   Proteins 14 (2), 178-190 (1992)
   PUBMED   1409567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01494.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Paramicrobacterium chengjingii"
                     /db_xref="taxon:2769067"
     Protein         1..442
                     /product="FAD-dependent monooxygenase"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /calculated_mol_wt=49169
     Region          38..430
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mrvpnpprha hltkakntml diaiigagpa glaaalrlhq kgfrpriyea vpelkplgvg
       61 ldvkvyaaqe ldelglleef rqisvnakes ifynkygqei yaelcgtaag yeyeqrfvhr
      121 gilqmmlhrt vierlgedav vqgarlekyv qdaekvtlyl dhvdgtgsqv tadllvaadg
      181 iksvvrrqmh pesadpvysg itmwrgttlm epfrdgntil higapdissm vvypiadnfe
      241 gsgltlvnwv veafrhesde dwnqtgsvde ilpyydqcei pfldvqqmlr narevylfpl
      301 irhdpldtwt dnrvvligda ahamyprggn gacqsivdgn vlaqklasfd dpadaltafe
      361 serlttvnni vmshrgegye virrmveert sgnrfdnied vlpldeanai fskyhamvgq
      421 krigfatdep tgfrtddalt as
//
LOCUS       WP_235934505             322 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase [Paramicrobacterium chengjingii].
ACCESSION   WP_235934505
VERSION     WP_235934505.1
KEYWORDS    RefSeq.
SOURCE      Paramicrobacterium chengjingii
  ORGANISM  Paramicrobacterium chengjingii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Paramicrobacterium.
REFERENCE   1  (residues 1 to 322)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Paramicrobacterium chengjingii"
                     /db_xref="taxon:2769067"
     Protein         1..322
                     /product="PfkB family carbohydrate kinase"
                     /calculated_mol_wt=32956
     Region          11..298
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
     Site            order(50,260,263)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238177"
     Site            order(197,230,258,261..262,265)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238177"
ORIGIN      
        1 mselsmpdrg rlvyvgnviv dlvmqidaip epggdtiahs smhtagggfn tmiaaardga
       61 dvvftgqygt gpfgstvraa lrdsgfdvvq tgiadvdsgy cvalvdaste rtfvtsvgae
      121 gmltaddlar vtlrendivf vsgyslahps naaaipgwle sipgnvrvvl dpspligeld
      181 advrervlrr tdiltlnare aqilsggrek saaterlssm irvggsvivr dgergallar
      241 agtaavtipa ievtavdsng agdahggvlt aallrgaalp davrranfaa alavtqvgps
      301 tsptatqida aladaprsqg rl
//
LOCUS       WP_235934509              80 aa            linear   BCT 02-MAR-2025
DEFINITION  putative signal transducing protein [Sunxiuqinia indica].
ACCESSION   WP_235934509
VERSION     WP_235934509.1
KEYWORDS    RefSeq.
SOURCE      Sunxiuqinia indica
  ORGANISM  Sunxiuqinia indica
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia;
            Marinilabiliales; Prolixibacteraceae; Sunxiuqinia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020967.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09413.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Sunxiuqinia indica"
                     /db_xref="taxon:2692584"
     Protein         1..80
                     /product="putative signal transducing protein"
                     /calculated_mol_wt=8872
     Region          11..77
                     /region_name="DUF2007"
                     /note="Putative prokaryotic signal transducing protein;
                     cl09659"
                     /db_xref="CDD:471910"
ORIGIN      
        1 mirtpdretv vvfrghpmka emvhellkgh eiisfinnel mgsiapwqvs aggfqpveiv
       61 inkkdelkai slieefqsat
//
LOCUS       WP_235934290             155 aa            linear   BCT 02-MAR-2025
DEFINITION  SIP domain-containing protein [Paramicrobacterium chengjingii].
ACCESSION   WP_235934290
VERSION     WP_235934290.1
KEYWORDS    RefSeq.
SOURCE      Paramicrobacterium chengjingii
  ORGANISM  Paramicrobacterium chengjingii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Paramicrobacterium.
REFERENCE   1  (residues 1 to 155)
  AUTHORS   Butterton,J.R. and Calderwood,S.B.
  TITLE     Identification, cloning, and sequencing of a gene required for
            ferric vibriobactin utilization by Vibrio cholerae
  JOURNAL   J Bacteriol 176 (18), 5631-5638 (1994)
   PUBMED   8083157
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016818.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04954.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Paramicrobacterium chengjingii"
                     /db_xref="taxon:2769067"
     Protein         1..155
                     /product="SIP domain-containing protein"
                     /calculated_mol_wt=16731
     Region          25..145
                     /region_name="SIP"
                     /note="Siderophore-interacting protein; pfam04954"
                     /db_xref="CDD:428217"
ORIGIN      
        1 mmnetrtrsv gaharrdarg lghiyllmad estlpeldaa iqtlpycarg rifievdgaa
       61 dvavieaptr mtvtwltrrt rsgapgsgta catgeamsra vnawsdemly astdtphiwl
      121 gghyrgvsav hehlvsdldv aperivtpap yrlnt
//
LOCUS       WP_235934302             640 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6807 family protein [Agromyces humi].
ACCESSION   WP_235934302
VERSION     WP_235934302.1
KEYWORDS    RefSeq.
SOURCE      Agromyces humi
  ORGANISM  Agromyces humi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Agromyces.
REFERENCE   1  (residues 1 to 640)
  AUTHORS   Singh,B.K. and Tate,K.
  TITLE     Biochemical and molecular characterization of methanotrophs in soil
            from a pristine New Zealand beech forest
  JOURNAL   FEMS Microbiol Lett 275 (1), 89-97 (2007)
   PUBMED   17696992
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025465.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14100.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Agromyces humi"
                     /db_xref="taxon:1766800"
     Protein         1..640
                     /product="DUF6807 family protein"
                     /calculated_mol_wt=68377
     Region          5..333
                     /region_name="PurR"
                     /note="DNA-binding transcriptional regulator, LacI/PurR
                     family [Transcription]; COG1609"
                     /db_xref="CDD:441217"
     Region          345..614
                     /region_name="DUF6807"
                     /note="Family of unknown function (DUF6807); pfam14100"
                     /db_xref="CDD:433715"
ORIGIN      
        1 mpnpprqvti aqvaeyagvs qasvsrvlnr nqkvdpaisa kvrdaiekln yspsqmarnl
       61 vrgrsntval vvpdlenpmf qgvlkglare aaldgyrvlv adtaervade ediavearsr
      121 cdalvlvspr mpaerleall arsgpivvvn rpvasdpaae lsvdyehatr tlgehlvalg
      181 htriaylagp pqayadglrr hglaelvarr egtevldlag gsqvedgyra aedvlssgat
      241 aviafndlva lgllarlrel gvdvpgeisv agiddiplar fsapalttms vprlelgaqs
      301 wrrlrdamag spashplsyr aileargstg papeasgwls pgrpvlrigd rvvaryeegt
      361 sidsvlsprp ylhpvetlgg vrvtdshptd hlhhfgigva lpdvngtsyw ggrtyvqdvg
      421 simlenqgsq rrdaltvddd vlverltwid erevaqlsev rvltgrparv gerdawtlgw
      481 rstlaanfga ltlgspatng regagygglf wrfprwdatv itregegesv ahgstspwla
      541 vvdarrrvtv llaqpegppa lpwfarvdey lgigpavawd eivtvpeggr lelgidalli
      601 draitdaael eqlastlgaa vntpvaglet glvanpdrra
//
LOCUS       WP_235934576              30 aa            linear   BCT 02-MAR-2025
DEFINITION  Rho termination factor N-terminal domain-containing protein
            [Agromyces humi].
ACCESSION   WP_235934576
VERSION     WP_235934576.1
KEYWORDS    RefSeq.
SOURCE      Agromyces humi
  ORGANISM  Agromyces humi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Agromyces.
REFERENCE   1  (residues 1 to 30)
  AUTHORS   Bogden,C.E., Fass,D., Bergman,N., Nichols,M.D. and Berger,J.M.
  TITLE     The structural basis for terminator recognition by the Rho
            transcription termination factor
  JOURNAL   Mol Cell 3 (4), 487-493 (1999)
   PUBMED   10230401
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019139.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07498.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..30
                     /organism="Agromyces humi"
                     /db_xref="taxon:1766800"
     Protein         1..30
                     /product="Rho termination factor N-terminal
                     domain-containing protein"
                     /GO_process="GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /calculated_mol_wt=3076
     Region          1..>25
                     /region_name="Rho_N"
                     /note="Rho termination factor, N-terminal domain; cl06505"
                     /db_xref="CDD:447016"
ORIGIN      
        1 maelrqlara rgvagysrft kaqlvvslgg
//
LOCUS       WP_235934600             362 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Agromyces humi].
ACCESSION   WP_235934600
VERSION     WP_235934600.1
KEYWORDS    RefSeq.
SOURCE      Agromyces humi
  ORGANISM  Agromyces humi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Agromyces.
REFERENCE   1  (residues 1 to 362)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Agromyces humi"
                     /db_xref="taxon:1766800"
     Protein         <1..362
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <2..361
                     /region_name="IolD"
                     /note="TPP-dependent trihydroxycyclohexane-1,2-dione
                     (THcHDO) dehydratase, myo-inositol metabolism
                     [Carbohydrate transport and metabolism]; COG3962"
                     /db_xref="CDD:443162"
ORIGIN      
        1 ggalpwdhpg ylggvgatgs taanrlaada dvvigigtry sdfttasrta fqhpdvtfvn
       61 lnvapfdayk hgthlplvad aragiealer eliglradpa rteriareka gwdavvdaaf
      121 vpsrrdrpaq aeiigavqsa sdptdvvvqa agslpgdlhr lwrvrdplgy hveyafscmg
      181 yeiagglgvr raapdrdviv mvgdgsylml htelvtavae gqklivvlvq nhgyasignl
      241 sesvggqrfg tryrtydtda rnfqggaplp vdlaanarsy gvdvieiapg pdaiddlrra
      301 vatakasdat tlihvesdpl lggpdgegww dvpvaetsqv psvqqaraay esartaqrpl
      361 lg
//
LOCUS       WP_235934611             340 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Agromyces humi].
ACCESSION   WP_235934611
VERSION     WP_235934611.1
KEYWORDS    RefSeq.
SOURCE      Agromyces humi
  ORGANISM  Agromyces humi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Agromyces.
REFERENCE   1  (residues 1 to 340)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 340)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 340)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 340)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Agromyces humi"
                     /db_xref="taxon:1766800"
     Protein         1..340
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=35965
     Region          28..318
                     /region_name="drrA"
                     /note="daunorubicin resistance ABC transporter ATP-binding
                     subunit; TIGR01188"
                     /db_xref="CDD:130256"
ORIGIN      
        1 mtnqnrtsem itargltktf rskgqvveav rsvdldvaeg elvaflgpng agksttlrml
       61 ttllpptege atvagcdirr dpagvrrrig yvgqgnsggh tqrvrdelha qgafyglgrr
      121 etraraaelv eslelgqvan rqvqslsggq krrldialgl ihrpellfld epstgldphs
      181 ranlwehive lrrttgttif ltthyldead qlaervmvmd hgaviaddta walkeslagd
      241 qvtlafasat daaaaaarig gsvddsagad rtvvtatvsd gdralprwir elgdaglevv
      301 aathrqptld dvflaltgrs lreeaaaaas aesaaaasaa
//
LOCUS       WP_235934671             190 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein, partial [Agromyces humi].
ACCESSION   WP_235934671
VERSION     WP_235934671.1
KEYWORDS    RefSeq.
SOURCE      Agromyces humi
  ORGANISM  Agromyces humi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Agromyces.
REFERENCE   1  (residues 1 to 190)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 190)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Agromyces humi"
                     /db_xref="taxon:1766800"
     Protein         <1..>190
                     /product="GDSL-type esterase/lipase family protein"
     Region          87..>190
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(94,139,168)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
ORIGIN      
        1 vrareavhgr gwdvlgdelv ghyerviarr avaraapats nsgavleare rttpgrpvre
       61 pawprdataa asgaqptppv apppwrryva vgdslteglc desragtgef rgwadrlall
      121 lalaspadpv syanlavrsr rvadvvdvql plavaqradl vsvlvgandl vgarpdvagl
      181 aarlsdavgv
//
LOCUS       WP_235934674             100 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator, partial [Agromyces humi].
ACCESSION   WP_235934674
VERSION     WP_235934674.1
KEYWORDS    RefSeq.
SOURCE      Agromyces humi
  ORGANISM  Agromyces humi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Agromyces.
REFERENCE   1  (residues 1 to 100)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Agromyces humi"
                     /db_xref="taxon:1766800"
     Protein         1..>100
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
     Region          13..>100
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
ORIGIN      
        1 mpgepptpvv atvaivddhe avrlglraac reagyvvvae tanvpdllva ldgrscdvvv
       61 ldlslgdgss vtrnvhavrd tgsavlvhsi adrvaavrea
//
LOCUS       WP_235934708             689 aa            linear   BCT 02-MAR-2025
DEFINITION  prenyltransferase/squalene oxidase repeat-containing protein
            [Candidatus Laterigemmans baculatus].
ACCESSION   WP_235934708
VERSION     WP_235934708.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Laterigemmans baculatus
  ORGANISM  Candidatus Laterigemmans baculatus
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Candidatus Laterigemmans.
REFERENCE   1  (residues 1 to 689)
  AUTHORS   Wendt,K.U., Poralla,K. and Schulz,G.E.
  TITLE     Structure and function of a squalene cyclase
  JOURNAL   Science 277 (5333), 1811-1815 (1997)
   PUBMED   9295270
REFERENCE   2  (residues 1 to 689)
  AUTHORS   Poralla,K., Hewelt,A., Prestwich,G.D., Abe,I., Reipen,I. and
            Sprenger,G.
  TITLE     A specific amino acid repeat in squalene and oxidosqualene cyclases
  JOURNAL   Trends Biochem Sci 19 (4), 157-158 (1994)
   PUBMED   8016864
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012647.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00432.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Candidatus Laterigemmans baculatus"
                     /db_xref="taxon:2770505"
     Protein         1..689
                     /product="prenyltransferase/squalene oxidase
                     repeat-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=74372
     Region          80..535
                     /region_name="SqhC"
                     /note="Terpene cyclase SqhC [Lipid transport and
                     metabolism]; COG1657"
                     /db_xref="CDD:441263"
ORIGIN      
        1 mphhsilaet rqtldrlrge lldergraah wtgtlspsal statavsala vvrrsapeaa
       61 pettsarsle amiaagidsl ldsqnrdggf gdtdrsysni attmlgiaal rlgtarphsa
      121 vaaaidraes yveraggipa lrrrygtdkt fvipiltnca lagmvswrei palpfeaaav
      181 pqslyrrmrm pvvsyaipal vaigqahffh apprnpllaw lrrrlvgrtl evlermqpas
      241 ggyleatplt sfvlmslast graahpvsqq avrflresql edgswpidtn latwvtslav
      301 halasdpedd aawaddalle wllrcqhter hpftgaepgg wgwtdlsgav pdgddtpaai
      361 lalaelqkkt ppqsssgraa gvrqrvekas qagagwllql qnrdggwptf crgwgrlpfd
      421 rsstdltaha lraldrlrtl caprtleagg adlrqaalqr aaargwrflr ksqqadgswl
      481 plwfgnqdnp ddgnpvygtg rvllaldpsd seqraagira adyllaaqna dggwgggisr
      541 tqwlrreegl dgeaegvtss veetaialeg laafvlsaeg gqaargqaea errgnsgyaa
      601 ercsgsserd angggesryr saiiramtfl cravredrhh npwpigfyfa klwyherlyp
      661 tifataalgt asrllgqpha dpqrdvera
//
LOCUS       WP_235934275             465 aa            linear   BCT 02-MAR-2025
DEFINITION  IPT/TIG domain-containing protein [Sunxiuqinia indica].
ACCESSION   WP_235934275
VERSION     WP_235934275.1
KEYWORDS    RefSeq.
SOURCE      Sunxiuqinia indica
  ORGANISM  Sunxiuqinia indica
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia;
            Marinilabiliales; Prolixibacteraceae; Sunxiuqinia.
REFERENCE   1  (residues 1 to 465)
  AUTHORS   Bork,P., Doerks,T., Springer,T.A. and Snel,B.
  TITLE     Domains in plexins: links to integrins and transcription factors
  JOURNAL   Trends Biochem Sci 24 (7), 261-263 (1999)
   PUBMED   10390613
REFERENCE   2  (residues 1 to 465)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Gleaning non-trivial structural, functional and evolutionary
            information about proteins by iterative database searches
  JOURNAL   J Mol Biol 287 (5), 1023-1040 (1999)
   PUBMED   10222208
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01833.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Sunxiuqinia indica"
                     /db_xref="taxon:2692584"
     Protein         1..465
                     /product="IPT/TIG domain-containing protein"
                     /calculated_mol_wt=49864
     Region          28..93
                     /region_name="IPT"
                     /note="Immunoglobulin-like fold, Plexins, Transcription
                     factors (IPT). IPTs are also known as Transcription factor
                     ImmunoGlobin (TIG) domains. They are present in
                     intracellular transcription factors, cell surface
                     receptors (such as plexins and scatter factor...; cl15674"
                     /db_xref="CDD:472823"
     Region          110..>169
                     /region_name="TIG"
                     /note="IPT/TIG domain; pfam01833"
                     /db_xref="CDD:460355"
ORIGIN      
        1 mgfvlscred fdpeiaeype itienfspkm arpgasvtit gtnfgdrtea vtvafsgvea
       61 evtstednei vvtvpeqaat gnlsvkvwls ekqfmdefiv ipgakiasys stsvglgdtv
      121 titgtnfgsd addvnitine veaeiisvnd teiqfrvpdt stgifvmkvg aqtiegpvfl
      181 vgiekvtgel fghsgswgnn pdteidagvd gdietfvdan gsvgylgykl dggygviptm
      241 irffprvtha grmvgaeirg tndpsnaanp ssgeydvlyt ipetpnteef tqvdleagnt
      301 ayqyiyiyfa sgggnlseie fygkievpkl tgtlighsgs wndnpdteii aavdgdlstf
      361 vdgatssgyv gydlgngrta vvtkfryapr ashparmvgg elrasndpdy lnnftvlhti
      421 esepgvdeys eaeineatsy ryiyyysssg scnvaevefy glesn
//
LOCUS       WP_235934751             322 aa            linear   BCT 02-MAR-2025
DEFINITION  CNNM domain-containing protein [Candidatus Laterigemmans
            baculatus].
ACCESSION   WP_235934751
VERSION     WP_235934751.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Laterigemmans baculatus
  ORGANISM  Candidatus Laterigemmans baculatus
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Candidatus Laterigemmans.
REFERENCE   1  (residues 1 to 322)
  AUTHORS   Chen,Y.S., Kozlov,G., Moeller,B.E., Rohaim,A., Fakih,R., Roux,B.,
            Burke,J.E. and Gehring,K.
  TITLE     Crystal structure of an archaeal CorB magnesium transporter
  JOURNAL   Nat Commun 12 (1), 4028 (2021)
   PUBMED   34188059
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 322)
  AUTHORS   Gimenez-Mascarell,P., Oyenarte,I., Hardy,S., Breiderhoff,T.,
            Stuiver,M., Kostantin,E., Diercks,T., Pey,A.L., Ereno-Orbea,J.,
            Martinez-Chantar,M.L., Khalaf-Nazzal,R., Claverie-Martin,F.,
            Muller,D., Tremblay,M.L. and Martinez-Cruz,L.A.
  TITLE     Structural Basis of the Oncogenic Interaction of Phosphatase PRL-1
            with the Magnesium Transporter CNNM2
  JOURNAL   J Biol Chem 292 (3), 786-801 (2017)
   PUBMED   27899452
REFERENCE   3  (residues 1 to 322)
  AUTHORS   Gulerez,I., Funato,Y., Wu,H., Yang,M., Kozlov,G., Miki,H. and
            Gehring,K.
  TITLE     Phosphocysteine in the PRL-CNNM pathway mediates magnesium
            homeostasis
  JOURNAL   EMBO Rep 17 (12), 1890-1900 (2016)
   PUBMED   27856537
REFERENCE   4  (residues 1 to 322)
  AUTHORS   de Baaij,J.H., Stuiver,M., Meij,I.C., Lainez,S., Kopplin,K.,
            Venselaar,H., Muller,D., Bindels,R.J. and Hoenderop,J.G.
  TITLE     Membrane topology and intracellular processing of cyclin M2 (CNNM2)
  JOURNAL   J Biol Chem 287 (17), 13644-13655 (2012)
   PUBMED   22399287
REFERENCE   5  (residues 1 to 322)
  AUTHORS   Yang,M., Jensen,L.T., Gardner,A.J. and Culotta,V.C.
  TITLE     Manganese toxicity and Saccharomyces cerevisiae Mam3p, a member of
            the ACDP (ancient conserved domain protein) family
  JOURNAL   Biochem J 386 (Pt 3), 479-487 (2005)
   PUBMED   15498024
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013741.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01595.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Candidatus Laterigemmans baculatus"
                     /db_xref="taxon:2770505"
     Protein         1..322
                     /product="CNNM domain-containing protein"
                     /calculated_mol_wt=34677
     Region          1..>265
                     /region_name="TlyC"
                     /note="Hemolysin-related protein, contains CBS domains,
                     UPF0053 family [General function prediction only];
                     COG1253"
                     /db_xref="CDD:440865"
ORIGIN      
        1 mmllallffs vglalsaffs gsetgmyrvs rirlvldals gsrvarglvw llnhpalfva
       61 ttlvgnnian yftslsvvla aaalwpggga tvellgpill tplifvcgel lpkylffnap
      121 yrllklaggp flfftvllmp vsivlgllgq llslltgqap frvrmgmara eleqvlregh
      181 eagllagtqr tlaqnvfqvg nqrairfgvp rerlavvdlt adraaaraaa rrqghpivlv
      241 qsedqiigyy wyaelvaapp espptlqpvv qgrasqkhfs vllelcesgs dvallrskeg
      301 slravvtrrq llqpllaptp ad
//
LOCUS       WP_235934809             863 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1549 domain-containing protein [Candidatus Laterigemmans
            baculatus].
ACCESSION   WP_235934809
VERSION     WP_235934809.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Laterigemmans baculatus
  ORGANISM  Candidatus Laterigemmans baculatus
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Candidatus Laterigemmans.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019219.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07583.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..863
                     /organism="Candidatus Laterigemmans baculatus"
                     /db_xref="taxon:2770505"
     Protein         1..863
                     /product="DUF1549 domain-containing protein"
                     /calculated_mol_wt=94029
     Region          58..130
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); cl02708"
                     /db_xref="CDD:445894"
     Region          <99..>124
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          368..553
                     /region_name="PSCyt2"
                     /note="Protein of unknown function (DUF1549); pfam07583"
                     /db_xref="CDD:429550"
     Region          602..831
                     /region_name="PSD1"
                     /note="Protein of unknown function (DUF1553); pfam07587"
                     /db_xref="CDD:429553"
ORIGIN      
        1 msciavaaep lpptpavppv qptdatqptd aaqpaapqgl gdpgqllalv iqtgrgaeep
       61 lvlvgneprq qlvvtgeyss gqhrdltsav hysaepagvv avdasgvvtp lgngtatira
      121 tvtdkakpae panpaepanp aeplaaaiel rvesfehnpp vnfpnqvvpi ftklqcnsgg
      181 chgksggqng frlsllgfep hedfeyltre argrrlnlsa pdlslllqka agvvphggga
      241 rmevdshnyr lirrwiaega sygdpeasrv asievfpkar mmgpgseqql vvlarytdgs
      301 iedvtataqy eanvvemaev tnrglvttad qtgdvavmvr yqshvdvfra tiplgapiet
      361 lpsprnfvdq lvfkklqllg lppselcdda tflrrvtvdi agrlptaeea aafladpaad
      421 krdrwidsll dstdyadnfa kkwtailrnk rvaapgddgr hgtyafhawi rqslhenapy
      481 defvrgvvaa tgdasenpgv iwyrsvrdak aqaedaaqlf lgmrmqcaqc hhhpfekwsq
      541 rdyysltsff sqvgrkpgal paeerifhrr gvatavnprd nqpvkpaglg dqpmeiapee
      601 dprqhlvdwm sqddnpyfah tfvnrywkhf fgrglveped dmrqtnpatn pellealaeh
      661 fiasgfdmkd lvrticqsqt yqlssvpnay naddqqnfsr yypkrlpaev lldavdlvtg
      721 sstrfpgvpa gtravqlpds gfnsyflsvf grpegnsace certseanla qglhlinssd
      781 mlaklaaaeg raarlaadsn remaakieel yltalsrspt adevatvsey vtrksqeegs
      841 daklayedvl walintkefl fnh
//
LOCUS       WP_235934824             881 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1553 domain-containing protein [Candidatus Laterigemmans
            baculatus].
ACCESSION   WP_235934824
VERSION     WP_235934824.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Laterigemmans baculatus
  ORGANISM  Candidatus Laterigemmans baculatus
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Candidatus Laterigemmans.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019223.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07587.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Candidatus Laterigemmans baculatus"
                     /db_xref="taxon:2770505"
     Protein         1..881
                     /product="DUF1553 domain-containing protein"
                     /calculated_mol_wt=97651
     Region          <4..139
                     /region_name="CccA"
                     /note="Cytochrome c, mono- and diheme variants [Energy
                     production and conversion]; COG2010"
                     /db_xref="CDD:441613"
     Region          63..118
                     /region_name="PSCyt1"
                     /note="Planctomycete cytochrome C; pfam07635"
                     /db_xref="CDD:429568"
     Region          184..398
                     /region_name="PSCyt2"
                     /note="Protein of unknown function (DUF1549); pfam07583"
                     /db_xref="CDD:429550"
     Region          585..844
                     /region_name="PSD1"
                     /note="Protein of unknown function (DUF1553); pfam07587"
                     /db_xref="CDD:429553"
ORIGIN      
        1 mthpaafrdr slrrmlgtla lcglvaallp rwgvaaepas naepeaetlt feehvrpifr
       61 kycfdchgat eeykggldlr lvrlmldggd sgevlvpgda egsyllqrvr sgemppgdhr
      121 vedaevella rwiaagapta rpepaeidpg igitpeeref wffqpivlpe vptfaaerrv
      181 rtpidalvla amqpeglgfs pdadrltlir rasldlrglp ptpeevqrfv edpapdayer
      241 lverllaspe ygerwgrhwl dvagyadseg ydnqdavrpy aykyrdyvir sfnvdkplda
      301 fiaeqlagde lvegslenls aadierlvat gflrmaadgt ggggvdpvaa rnqviadtvk
      361 ivgsgllgls vacaqchdhr ydpishedyf rlrailepay dpahwrnpdq rrislysdad
      421 raraaeveae aavvvaertq kqqeymaaal eqelakhpee lreplrnayq taaaerseaq
      481 qqllkmypsv nispgvlyqy npeaaedlkk ydariveira kkpvedfvra lteipgqvpt
      541 trlfhrgdpq qprqevspgd ltvaapagep faiaandper pttgrrlafa rrltgpdhpl
      601 fprvlanriw mhhfgrglvd tpgdfgilgg rpshpqvldw laatlrregw slkqlhrlim
      661 tstvyrqssv rteklaavdp dnrwyarqnv qrldaevird silaasgrlq rtmggppvpi
      721 eadptgqivv naaprrsvyv qvrrtqpvam ltafdapvme tncevrpsst vatqalmmmn
      781 sdflleqaae marrvaetpp mtwaepndpq aaaaalapqv atawqlaysr pieaeelqls
      841 laflaaqwph lprdgnvppe rqaminlcqt llssneflys p
//
LOCUS       WP_235934847             214 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6624 domain-containing protein [Cognatundibacterium crateris].
ACCESSION   WP_235934847
VERSION     WP_235934847.1
KEYWORDS    RefSeq.
SOURCE      Cognatundibacterium crateris
  ORGANISM  Cognatundibacterium crateris
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Cognatundibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042672.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20329.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Cognatundibacterium crateris"
                     /db_xref="taxon:2528175"
     Protein         1..214
                     /product="DUF6624 domain-containing protein"
                     /calculated_mol_wt=24670
     Region          29..199
                     /region_name="DUF6624"
                     /note="Family of unknown function (DUF6624); pfam20329"
                     /db_xref="CDD:466479"
ORIGIN      
        1 mktvitavil lllasphcks qescqpasln ieleqvlerd qsslqkynla dqeqrfapsa
       61 ehladkerll kllksamqqn kevfekiiad cgwpdarkls ykantalfli vqhgskderi
      121 ryfpyfeqqy rdkllnsqry vlmvdrmrfd qglgqlygtq ffpeksgiav ygevfepekl
      181 nerreqmsmm rikafddayp qpsqskskss stsk
//
LOCUS       WP_235934882             831 aa            linear   BCT 02-MAR-2025
DEFINITION  4Fe-4S binding protein [Candidatus Laterigemmans baculatus].
ACCESSION   WP_235934882
VERSION     WP_235934882.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Laterigemmans baculatus
  ORGANISM  Candidatus Laterigemmans baculatus
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Candidatus Laterigemmans.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012267.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00037.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Candidatus Laterigemmans baculatus"
                     /db_xref="taxon:2770505"
     Protein         1..831
                     /product="4Fe-4S binding protein"
                     /calculated_mol_wt=89517
     Region          <6..78
                     /region_name="YbbP"
                     /note="Predicted ABC-type transport system involved in
                     lysophospholipase L1 biosynthesis, permease component
                     [Secondary metabolites biosynthesis, transport and
                     catabolism]; COG3127"
                     /db_xref="CDD:442361"
     Region          <299..510
                     /region_name="NapH"
                     /note="Polyferredoxin NapH [Energy production and
                     conversion]; COG0348"
                     /db_xref="CDD:440117"
     Region          569..747
                     /region_name="DMSOR_beta_like"
                     /note="uncharacterized subfamily of DMSO Reductase beta
                     subunit family; cd16373"
                     /db_xref="CDD:319895"
     Site            order(577,584..587,589..590,594,598,606,608,620,623..626,
                     630,634..635,638..639,655,671..674,678..679,683,685..686,
                     714,716..720,723,727,743)
                     /site_type="other"
                     /note="Fe-S cluster binding site [ion binding]"
                     /db_xref="CDD:319895"
ORIGIN      
        1 mkypkvlgvs aaivggilta fagrlilaar vmdfglsvll avgvllcgtg vlvlasasrr
       61 sgsrallrld cflpvlrrtr pgeaerrgwf gklavrvlpg slfsdrqtkq rglarrglrr
      121 lgiswlsapv rrlsqtvcfa aflglffava wpydarppaa vreslgwrfa efgqadgriq
      181 featsvpswl qpgsvtyaie esggvpleha raasdpiamr ldevssdhir fvplqelsge
      241 tvdrfllssa dwkllsrdpt awpshyadnl qrkewlpael flvidplvsl staiasrswv
      301 wslssaavil ilcllvprgf cgyvcplgtl idlfdwsigr rvtrfrvaee gwwvhikyyl
      361 llgtliaavc gvlvsgyvaa ipvitrgmlv lggplqngia rgwhlvppih lghivslamf
      421 fgvlslgllr prfwckyvcp sgatfslgnl frlterkves scihcnkcve icpfdaikpd
      481 fttrgtdctl cqtcagvcpt haikfvergn lvqlkvnndp ptgetsigrr gflslaggta
      541 aaiaggvgit aatralgtgl ndperihpvr ppgsvpekaf lemcircgec fkacpndvlq
      601 lqgfgqgleg lwtpavnadw agcesscnac gqvcptgair alplaekrva rmglaivdes
      661 sclphvgrea cdlcvqecda agyhaieytq vgtetneage piagsgylap vvrdgacvgc
      721 glcqtrcyai nvkdkrllsk saiiveageg kedrlmsgsy ielrqqerlr ratdqpaqrv
      781 kpgyfvpesa asrpdlgqlp eadrvkiaps tesqddpaad adpfglggml e
//
LOCUS       WP_235934939             220 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Cognatundibacterium crateris].
ACCESSION   WP_235934939
VERSION     WP_235934939.1
KEYWORDS    RefSeq.
SOURCE      Cognatundibacterium crateris
  ORGANISM  Cognatundibacterium crateris
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Cognatundibacterium.
REFERENCE   1  (residues 1 to 220)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Cognatundibacterium crateris"
                     /db_xref="taxon:2528175"
     Protein         1..220
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=23931
     Region          <12..>130
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            35..68
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206766"
ORIGIN      
        1 miaskdelln cirelakstk eldtmahevg qiaaqtnlla inaaieaarv gehgrgfavv
       61 agevrklshl saetgrrmge rvknvsavmq talntadrta sqdsqileis ghvvkdvlsh
      121 vesmgdtakq llihggairg nieeslvslq fqdrigqmld vvrtdiqklq qqvahagpge
      181 lpatsvwlee lqttytmqde yrnhgkddas teneteitff
//
LOCUS       WP_235935013              84 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-homoserine-lactone synthase [Cognatundibacterium crateris].
ACCESSION   WP_235935013
VERSION     WP_235935013.1
KEYWORDS    RefSeq.
SOURCE      Cognatundibacterium crateris
  ORGANISM  Cognatundibacterium crateris
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Cognatundibacterium.
REFERENCE   1  (residues 1 to 84)
  AUTHORS   Chakrabarti,S. and Sowdhamini,R.
  TITLE     Functional sites and evolutionary connections of acylhomoserine
            lactone synthases
  JOURNAL   Protein Eng 16 (4), 271-278 (2003)
   PUBMED   12736370
REFERENCE   2  (residues 1 to 84)
  AUTHORS   Nasser,W., Bouillant,M.L., Salmond,G. and Reverchon,S.
  TITLE     Characterization of the Erwinia chrysanthemi expI-expR locus
            directing the synthesis of two N-acyl-homoserine lactone signal
            molecules
  JOURNAL   Mol Microbiol 29 (6), 1391-1405 (1998)
   PUBMED   9781877
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012967.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00765.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Cognatundibacterium crateris"
                     /db_xref="taxon:2528175"
     Protein         1..84
                     /product="acyl-homoserine-lactone synthase"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=9517
     Region          8..>68
                     /region_name="LasI"
                     /note="N-acyl-homoserine lactone synthase LasI
                     (autoinducer biosynthesis) [Signal transduction
                     mechanisms]; COG3916"
                     /db_xref="CDD:443121"
ORIGIN      
        1 mqlnleiaar tafpkselfa mqrlrakvfs grmgwevpvm sgmeidgyda mdpyymmmre
       61 eggilrgsrs vhverqlprv parp
//
LOCUS       WP_235935025            1304 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Cognatundibacterium crateris].
ACCESSION   WP_235935025
VERSION     WP_235935025.1
KEYWORDS    RefSeq.
SOURCE      Cognatundibacterium crateris
  ORGANISM  Cognatundibacterium crateris
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Cognatundibacterium.
REFERENCE   1  (residues 1 to 1304)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1304
                     /organism="Cognatundibacterium crateris"
                     /db_xref="taxon:2528175"
     Protein         1..1304
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=146215
     Region          130..400
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          133..159
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(135..136,139..140,142,172,175..176,179..180,
                     182..183,206,209,216,219..220,223)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          170..200
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          406..>546
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          <543..1187
                     /region_name="PRK11107"
                     /note="hybrid sensory histidine kinase BarA; Provisional"
                     /db_xref="CDD:236848"
ORIGIN      
        1 mtsdfdqtei qwreqcfvaf dlmrdspevg rliakslrte arekrrpvlg glaeilyafa
       61 dffdgklhla epefertatm feligdsegl afsllgtvav wrrhgraeqa yslchsrilp
      121 ilpegdhrlt vlvlnilgtl sqelgyteea irhfynaleq akrlqisnrv sqilanlgei
      181 fyisgnaeda evlleearei avdsdekwla pfistmlalc ylalekydda ylsvanyise
      241 gsahhtdnss rafclsvaay tlaargqlte adhlnsiams lldtyedkpl kpyswwvngy
      301 lhrchqrfpe aisdlrraid svgdkgyvym plramrelie ifgetgqwee gyqeqqrymt
      361 lfvkaqglat rvhvqtlhig helkeaelar rlaeeayaer qalddelqri laeretilen
      421 sivgmvflnn egrvqwankp lcqifgvdrh avlgaslepf ytsrdayhas gaavseavlr
      481 geayeselqm rradgslfwv hfsgravdqn rltmgtvwvv mditerkrle tqlqesmaeq
      541 lrlrtlqmqa elkeaerari haeeataaks mflanmshei rtpmnaiigm ahlalrtdld
      601 dkqrdyveki hhagmsllgi vndildfskv eagklsiehi dfnlnevlen itlmtadray
      661 eknlefilhv pkeiprllrg dslrlgqvli nlinnaikft dagevfmscr vaeskawrvk
      721 lefevsdtgi gmseeqtqrl fqpfsqades ttrrfggtgl glsiskrlie lmggeislns
      781 dmgvgttvrf htwfdlpekr lalapavmtn palkvlivdd nrkaaqvlse elailtpnce
      841 svhsataamq aieladhatp fdlvfvdlrm peldglslis llknvknlrs mpkfillgvh
      901 areeasfrtd tvlpdafmrk pvnasilrqc ldnlmliehe pnisrsqqav pqfpglrvll
      961 vednevnqqi arelmeaaai dvslvangre avdlvlrhpp ehfgmvfmdv qmpemdghea
     1021 trlirlnpay adlpivamta hamaeerahc lrsgmdahvt kpvdpqslyn tirqwcqpet
     1081 htlavppasp aaqtarlqid hidveeglrr algsqelyrd llgrfcesqk navtdarday
     1141 iagetaiaer lihtlkgvaa lisakamrks aeqlehsirg avsareiilr fdacqqelsq
     1201 ttaaieaalk sdldaaslpg tdakldraam qallqrseal laeydgeave llkdaseqll
     1261 lafgqevhqq lmralrqfef daalsivrea alnhgytrnp hveq
//
LOCUS       WP_235935026             377 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing phosphohydrolase [Cognatundibacterium
            crateris].
ACCESSION   WP_235935026
VERSION     WP_235935026.1
KEYWORDS    RefSeq.
SOURCE      Cognatundibacterium crateris
  ORGANISM  Cognatundibacterium crateris
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Cognatundibacterium.
REFERENCE   1  (residues 1 to 377)
  AUTHORS   Galperin,M.Y. and Chou,S.H.
  TITLE     Sequence Conservation, Domain Architectures, and Phylogenetic
            Distribution of the HD-GYP Type c-di-GMP Phosphodiesterases
  JOURNAL   J Bacteriol 204 (4), e0056121 (2022)
   PUBMED   34928179
REFERENCE   2  (residues 1 to 377)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024878.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13487.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Cognatundibacterium crateris"
                     /db_xref="taxon:2528175"
     Protein         1..377
                     /product="HD domain-containing phosphohydrolase"
                     /calculated_mol_wt=42630
     Region          11..>92
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Region          53..363
                     /region_name="HDGYP"
                     /note="HD-GYP domain, c-di-GMP phosphodiesterase class II
                     (or its inactivated variant) [Signal transduction
                     mechanisms]; COG2206"
                     /db_xref="CDD:441808"
ORIGIN      
        1 mldsyenasr ptvlvvddtp dnlsllsnll relyrvkiat sgakalqiaq tqpqpdlill
       61 dvmmpdmdgy etcrllkrda rtveipvifl taknqvhdee lglrlgavdy iskpvsppvm
      121 iarvatqfrl lkaqqqlrmq nqqlqllvte kteklnqlqq aiiiglasls esgdaaklnh
      181 lrrtqeylrv laqrlrqhpd farqlndeai slmaqaaplh digriqlpdw ilekrgkwge
      241 aelalmrqht vfgreaieiv etcfggthdf lrfareiays hqekwdgsgy pqqlsgeaip
      301 laarlmsvad vydalisdye yeparqhqea leilrassgs hfdprivhaf cevsdeiyri
      361 tqrfpvqaap eqmqmal
//
LOCUS       WP_235934821             187 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3540 domain-containing protein [Cognatundibacterium crateris].
ACCESSION   WP_235934821
VERSION     WP_235934821.1
KEYWORDS    RefSeq.
SOURCE      Cognatundibacterium crateris
  ORGANISM  Cognatundibacterium crateris
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Cognatundibacterium.
REFERENCE   1  (residues 1 to 187)
  AUTHORS   Shalom,G., Shaw,J.G. and Thomas,M.S.
  TITLE     In vivo expression technology identifies a type VI secretion system
            locus in Burkholderia pseudomallei that is induced upon invasion of
            macrophages
  JOURNAL   Microbiology (Reading) 153 (Pt 8), 2689-2699 (2007)
   PUBMED   17660433
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023482.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12059.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Cognatundibacterium crateris"
                     /db_xref="taxon:2528175"
     Protein         1..187
                     /product="DUF3540 domain-containing protein"
                     /calculated_mol_wt=20145
     Region          26..187
                     /region_name="DUF3540"
                     /note="Protein of unknown function (DUF3540); pfam12059"
                     /db_xref="CDD:432297"
ORIGIN      
        1 mmkispktqt ssspvpnspv waeacvavem qdgsfllddg rlaqpavscl lkpiagdkvl
       61 vamakqgdty ivhllhrprs vsaclsvpgm kqltimqqqv evnafdslal ralgdvdvta
      121 stgvlrltar nlfttvsesl vqnvrnyigq aeqylldvrq vlrlhgkqas vtaeqdvkid
      181 aerismg
//
LOCUS       WP_235935108             452 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidylprolyl isomerase [Cognatundibacterium crateris].
ACCESSION   WP_235935108
VERSION     WP_235935108.1
KEYWORDS    RefSeq.
SOURCE      Cognatundibacterium crateris
  ORGANISM  Cognatundibacterium crateris
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Cognatundibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025002.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13616.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Cognatundibacterium crateris"
                     /db_xref="taxon:2528175"
     Protein         1..452
                     /product="peptidylprolyl isomerase"
                     /EC_number="5.2.1.8"
                     /calculated_mol_wt=50831
     Region          42..447
                     /region_name="PRK10770"
                     /note="peptidyl-prolyl cis-trans isomerase SurA;
                     Provisional"
                     /db_xref="CDD:236758"
ORIGIN      
        1 mkqrtlvtll avstgllanp gawaqttqlk patalpavss kpravnsiia vvndeiitrq
       61 elderinvve krlkaqgtal psreelqkql lerlildraq lqlakengmr addlmldrtl
      121 qrmaeqnkms lqemrnqier egtpfarfre emredimmqr irdrevdski iiteteidnf
      181 laaeasakag kqeinlahil vripenasae qitlrrnrae evleklrgga dfakmavtys
      241 dsaealkgge igwreqerip qlfldavaqv ktgefsgiir sangfhilkl vgkragndpk
      301 agteivqqnr vrhilmkpsq ivpeaevrqk ltdlkrkiaa keisfeeaak tysadstask
      361 ggdigwinpg dvaafdevia klaigqvsdv iqsqfglhli evterksedq skdrkrmaar
      421 ealrerksde alqdwlrelr drtyvelrte ek
//
LOCUS       WP_235935139             318 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaJ C-terminal domain-containing protein [Candidatus Laterigemmans
            baculatus].
ACCESSION   WP_235935139
VERSION     WP_235935139.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Laterigemmans baculatus
  ORGANISM  Candidatus Laterigemmans baculatus
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Candidatus Laterigemmans.
REFERENCE   1  (residues 1 to 318)
  AUTHORS   Silva,J.C., Borges,J.C., Cyr,D.M., Ramos,C.H. and Torriani,I.L.
  TITLE     Central domain deletions affect the SAXS solution structure and
            function of yeast Hsp40 proteins Sis1 and Ydj1
  JOURNAL   BMC Struct Biol 11, 40 (2011)
   PUBMED   22011374
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 318)
  AUTHORS   Li,J., Qian,X. and Sha,B.
  TITLE     The crystal structure of the yeast Hsp40 Ydj1 complexed with its
            peptide substrate
  JOURNAL   Structure 11 (12), 1475-1483 (2003)
   PUBMED   14656432
REFERENCE   3  (residues 1 to 318)
  AUTHORS   Kelley,W.L.
  TITLE     The J-domain family and the recruitment of chaperone power
  JOURNAL   Trends Biochem Sci 23 (6), 222-227 (1998)
   PUBMED   9644977
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013705.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01556.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Candidatus Laterigemmans baculatus"
                     /db_xref="taxon:2770505"
     Protein         1..318
                     /product="DnaJ C-terminal domain-containing protein"
                     /calculated_mol_wt=34424
     Region          6..306
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
ORIGIN      
        1 mvmaedlyqv lgvrrdaskd eiqksyrkla rkyhpdmnpd naeakerfkr vqeaydvlsd
       61 dekrsaydry gsdfekirng gwhpgaggga sfegldleqi fggrgggggf eggfaeffeq
      121 lagagrggpr gprrraperg anvqhqltvp lrtavsggkv efylnrgkgn ekisvtippg
      181 vnegskirlr gqgqpsptgh eagdliltls vsshphfqrs gqnllltlpv tlgeaalgak
      241 vdvptpngti tltvppgsss grrlrlkgqg vqnrdgsngd llvdlqiklp esldeedqaa
      301 iraieqrhpm kprenlsw
//
LOCUS       WP_235935184             392 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Candidatus Laterigemmans baculatus].
ACCESSION   WP_235935184
VERSION     WP_235935184.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Laterigemmans baculatus
  ORGANISM  Candidatus Laterigemmans baculatus
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Candidatus Laterigemmans.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Candidatus Laterigemmans baculatus"
                     /db_xref="taxon:2770505"
     Protein         1..392
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=42972
     Region          3..356
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mrgglqsrtr qlaiaaleqg dqfhfisfgk nvfsdlaeqy pdqvvlhpgv didtrsvrpr
       61 hlikayqtlr tirpdviflc ntpmpnffpf laaapwagvr evvvhhgtdl gfvsrsegrr
      121 rwlgllpkpe iwhlelavas rlayrnvtla lfnndvqmgh wrngmhyppa rcalwyppmd
      181 larfqrlgra rnrirkewgl egsfviggvg rlcrqksfdv avralavass rlasaklvlv
      241 gqgedeagir hlvrqlglag rvvlvgeqpn vhewmsafda fclpatqpne slgivileam
      301 aagvpvvvtd lpgprrladg grcglvvaag dvemlanafv rlgrdeslrn alvqasqsvv
      361 aqceravvlq dlqarigssr vfgspascls ea
//
LOCUS       WP_235935369             243 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6088 family protein [Candidatus Laterigemmans baculatus].
ACCESSION   WP_235935369
VERSION     WP_235935369.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Laterigemmans baculatus
  ORGANISM  Candidatus Laterigemmans baculatus
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Candidatus Laterigemmans.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040319.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19570.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Candidatus Laterigemmans baculatus"
                     /db_xref="taxon:2770505"
     Protein         1..243
                     /product="DUF6088 family protein"
                     /calculated_mol_wt=26181
     Region          49..212
                     /region_name="DUF6088"
                     /note="Family of unknown function (DUF6088); pfam19570"
                     /db_xref="CDD:437402"
ORIGIN      
        1 mtaapvegaa aaaragvadg fdrvcfcqkk rvffltakds fmaetienrl lkrirgagrg
       61 svfipsqftd lggraaidqa lsrlaasgti rrlargvydy pkthpvmgel aptaeavaka
      121 iagrdqtrlq pagahaanll glseqvpakv vyltdgatrt vqvggqtiql rqttprnmaa
      181 agrlsglviq alrhlgkeqv teqhiaqlkr nlplsqrrtl lkdlklapvw mhplfrqlae
      241 dee
//
LOCUS       WP_235935372             551 aa            linear   BCT 02-MAR-2025
DEFINITION  TolC family protein [Candidatus Laterigemmans baculatus].
ACCESSION   WP_235935372
VERSION     WP_235935372.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Laterigemmans baculatus
  ORGANISM  Candidatus Laterigemmans baculatus
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Candidatus Laterigemmans.
REFERENCE   1  (residues 1 to 551)
  AUTHORS   Johnson,J.M. and Church,G.M.
  TITLE     Alignment and structure prediction of divergent protein families:
            periplasmic and outer membrane proteins of bacterial efflux pumps
  JOURNAL   J Mol Biol 287 (3), 695-715 (1999)
   PUBMED   10092468
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02321.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Candidatus Laterigemmans baculatus"
                     /db_xref="taxon:2770505"
     Protein         1..551
                     /product="TolC family protein"
                     /GO_function="GO:0015562 - efflux transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=60999
     Region          <20..>112
                     /region_name="PHA03381"
                     /note="tegument protein VP22; Provisional"
                     /db_xref="CDD:177618"
     Region          151..524
                     /region_name="TolC"
                     /note="Outer membrane protein TolC [Cell
                     wall/membrane/envelope biogenesis]; COG1538"
                     /db_xref="CDD:441147"
ORIGIN      
        1 mkrlfchtsv fvslamvgca spsapiggfs katavpdgys ppaesvasae ssapvtapep
       61 tsaptpeptp taavtavnfq desapnvprr qlldepaitp eqpysstepq apvesgnvfl
      121 papeippaps vtwqpqgmey ggqpidvapl tlseleaiac rnnptllqar aqvqgslgka
      181 iqaglwpnpt liyqaeqisl ndtpgefhgg lvrqrivtah kldlsrekfm artrtaewva
      241 laqqyrvlnd vrihyfrarg rqemvevqre llknaednvv tfremynvgq atraevhqan
      301 vrlqnqrlnl lmaendfhqa feeltalsgv elppggletp lvgelelidy dqaldrllqe
      361 spqigaarsk leadrltirr eiaepvpdii veggagynfv dkqtvgaagv mlevpvfdwn
      421 qgtirqaead ysrqvgevrr telflrqqla qqyrnyltav qqvrnyeqvi lpesklaydl
      481 rlqsyeedra pwtdvlqaeq dyfihrveyi rnliiwrene vsimgfllhg gladppnptp
      541 pghidavpqp r
//
LOCUS       WP_235935385             134 aa            linear   BCT 02-MAR-2025
DEFINITION  thioredoxin family protein [Candidatus Laterigemmans baculatus].
ACCESSION   WP_235935385
VERSION     WP_235935385.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Laterigemmans baculatus
  ORGANISM  Candidatus Laterigemmans baculatus
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Candidatus Laterigemmans.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025268.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13899.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Candidatus Laterigemmans baculatus"
                     /db_xref="taxon:2770505"
     Protein         1..134
                     /product="thioredoxin family protein"
                     /calculated_mol_wt=14436
     Region          1..>59
                     /region_name="SoxW"
                     /note="Thioredoxin-related protein SoxW [Posttranslational
                     modification, protein turnover, chaperones]; COG2143"
                     /db_xref="CDD:441746"
     Region          32..127
                     /region_name="CnoX"
                     /note="Chaperedoxin CnoX, contains thioredoxin-like and
                     TPR-like domains, YbbN/TrxSC family [Posttranslational
                     modification, protein turnover, chaperones]; COG3118"
                     /db_xref="CDD:442352"
ORIGIN      
        1 mlsmlltavl atvvsehspt qkysdayrta qqsgkplmvv vsgegcpacq tlkastlsql
       61 kssgqlsdvt ltvvdrdqep elagqlmrgp mipqiivfsq tdsgwkrlql tgfqtegrvr
      121 tlirkaltlg rrss
//
LOCUS       WP_235935451              34 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-binding dehydrogenase [Flavobacterium ichthyis].
ACCESSION   WP_235935451
VERSION     WP_235935451.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium ichthyis
  ORGANISM  Flavobacterium ichthyis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024989.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13602.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..34
                     /organism="Flavobacterium ichthyis"
                     /db_xref="taxon:2698827"
     Protein         1..34
                     /product="zinc-binding dehydrogenase"
                     /calculated_mol_wt=3738
     Region          <2..32
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
ORIGIN      
        1 mkpyishvfd fdemakahlq ietghtvgkv vvkl
//
LOCUS       WP_235935455             147 aa            linear   BCT 02-MAR-2025
DEFINITION  EndoU domain-containing protein [Flavobacterium ichthyis].
ACCESSION   WP_235935455
VERSION     WP_235935455.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium ichthyis
  ORGANISM  Flavobacterium ichthyis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 147)
  AUTHORS   Zhang,D., Iyer,L.M. and Aravind,L.
  TITLE     A novel immunity system for bacterial nucleic acid degrading toxins
            and its recruitment in various eukaryotic and DNA viral systems
  JOURNAL   Nucleic Acids Res 39 (11), 4532-4552 (2011)
   PUBMED   21306995
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14436.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Flavobacterium ichthyis"
                     /db_xref="taxon:2698827"
     Protein         1..147
                     /product="EndoU domain-containing protein"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /calculated_mol_wt=16645
     Region          26..145
                     /region_name="CdiA-CT_Ec-like"
                     /note="C-terminal (CT) domain of the contact-dependent
                     growth inhibition (CDI) system (CdiA-CT) protein CdiA of
                     Escherichia coli STEC_O31, and similar proteins; cl16881"
                     /db_xref="CDD:450106"
ORIGIN      
        1 mitqkvfnkq wlkledwvyl gdkgqgghfi nkfldveevt hpdgiyslaq laddtpfkak
       61 vtikssggka fpkmaessmf pknwdvkriq eeiayvyent vakgeglnpd svnkqfkqyk
      121 fkdsdgkfdi lievddtgki mnaypkl
//
LOCUS       WP_235935511              79 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Tritonibacter mobilis].
ACCESSION   WP_235935511
VERSION     WP_235935511.1
KEYWORDS    RefSeq.
SOURCE      Tritonibacter mobilis
  ORGANISM  Tritonibacter mobilis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Tritonibacter.
REFERENCE   1  (residues 1 to 79)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 79)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 79)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 79)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Tritonibacter mobilis"
                     /db_xref="taxon:379347"
     Protein         <1..79
                     /product="ATP-binding protein"
     Region          <27..71
                     /region_name="COG4251"
                     /note="Bacteriophytochrome (light-regulated signal
                     transduction histidine kinase) [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443393"
ORIGIN      
        1 ikqtaqskla yfyaalmdqf ctaldksrdq lessgmglai vkkhievagg eisvtsdgkr
       61 gttfeflwpv svpqqdkaa
//
LOCUS       WP_235935518             280 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfotransferase domain-containing protein [Tritonibacter mobilis].
ACCESSION   WP_235935518
VERSION     WP_235935518.1
KEYWORDS    RefSeq.
SOURCE      Tritonibacter mobilis
  ORGANISM  Tritonibacter mobilis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Tritonibacter.
REFERENCE   1  (residues 1 to 280)
  AUTHORS   Kakuta,Y., Pedersen,L.G., Carter,C.W., Negishi,M. and Pedersen,L.C.
  TITLE     Crystal structure of estrogen sulphotransferase
  JOURNAL   Nat Struct Biol 4 (11), 904-908 (1997)
   PUBMED   9360604
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012888.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00685.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Tritonibacter mobilis"
                     /db_xref="taxon:379347"
     Protein         1..280
                     /product="sulfotransferase domain-containing protein"
                     /GO_function="GO:0015016 - [heparan sulfate]-glucosamine
                     N-sulfotransferase activity [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=31522
     Region          <37..181
                     /region_name="Sulfotransfer_3"
                     /note="Sulfotransferase family; cl46325"
                     /db_xref="CDD:480665"
ORIGIN      
        1 msvapprilc vgthhktgtv wmrrvwrlig ealdipfvpv hnparwkkip qtgraivvnw
       61 agafapelfd npearflhii rdprdvllsg aryhenspgr qerflhgpre dlggksyqeh
      121 lqalpdpatk ldfemqnmhl ktlnemlawp yghdramdlr yedliadqdc vifmgvlrff
      181 gfseaeieta rqiyydnslf gglssesgvg rtathvssgk arqwpsklpr aaaerylech
      241 gddlitlgye sdkdwlsrle tdqqaeaasp pfaqaagrta
//
LOCUS       WP_235935538             100 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerophosphodiester phosphodiesterase family protein
            [Tritonibacter mobilis].
ACCESSION   WP_235935538
VERSION     WP_235935538.1
KEYWORDS    RefSeq.
SOURCE      Tritonibacter mobilis
  ORGANISM  Tritonibacter mobilis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Tritonibacter.
REFERENCE   1  (residues 1 to 100)
  AUTHORS   Kim,H. and Farrand,S.K.
  TITLE     Characterization of the acc operon from the nopaline-type Ti
            plasmid pTiC58, which encodes utilization of agrocinopines A and B
            and susceptibility to agrocin 84
  JOURNAL   J Bacteriol 179 (23), 7559-7572 (1997)
   PUBMED   9393724
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03009.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Tritonibacter mobilis"
                     /db_xref="taxon:379347"
     Protein         1..100
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /GO_function="GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=11093
     Region          3..>69
                     /region_name="PI-PLCc_GDPD_SF"
                     /note="Catalytic domain of phosphoinositide-specific
                     phospholipase C-like phosphodiesterases superfamily;
                     cl14615"
                     /db_xref="CDD:472694"
ORIGIN      
        1 mvravikagy gieidlqvsa dgramvfhdd elrnipdfer vgasfinhea sdvtrdrvqs
       61 lrhhrvpvls wtlrspeqea evaalvdnvt fenylsafga
//
LOCUS       WP_235935595             136 aa            linear   BCT 02-MAR-2025
DEFINITION  Swt1 family HEPN domain-containing protein [Devosia aurantiaca].
ACCESSION   WP_235935595
VERSION     WP_235935595.1
KEYWORDS    RefSeq.
SOURCE      Devosia aurantiaca
  ORGANISM  Devosia aurantiaca
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Devosiaceae; Devosia.
REFERENCE   1  (residues 1 to 136)
  AUTHORS   Anantharaman,V., Makarova,K.S., Burroughs,A.M., Koonin,E.V. and
            Aravind,L.
  TITLE     Comprehensive analysis of the HEPN superfamily: identification of
            novel roles in intra-genomic conflicts, defense, pathogenesis and
            RNA processing
  JOURNAL   Biol Direct 8, 15 (2013)
   PUBMED   23768067
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037501.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18731.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Devosia aurantiaca"
                     /db_xref="taxon:2714858"
     Protein         1..136
                     /product="Swt1 family HEPN domain-containing protein"
                     /calculated_mol_wt=15477
     Region          6..130
                     /region_name="HEPN_Swt1"
                     /note="Swt1-like HEPN; pfam18731"
                     /db_xref="CDD:465849"
ORIGIN      
        1 maeyyrlfym lendirrlid dtlteahgvg wwaahapnsa keecrqnqqr ereagvtsrs
       61 dneldfisfg qlgdvirhnw vlfggmlsne kalgrvmfal ntlrgpiahc gvlaedevdr
      121 lklavkdwfr llegpk
//
LOCUS       WP_235935653             242 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6456 domain-containing protein [Tritonibacter mobilis].
ACCESSION   WP_235935653
VERSION     WP_235935653.1
KEYWORDS    RefSeq.
SOURCE      Tritonibacter mobilis
  ORGANISM  Tritonibacter mobilis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Tritonibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040428.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20057.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Tritonibacter mobilis"
                     /db_xref="taxon:379347"
     Protein         1..242
                     /product="DUF6456 domain-containing protein"
                     /calculated_mol_wt=26782
     Region          101..232
                     /region_name="DUF6456"
                     /note="Domain of unknown function (DUF6456); pfam20057"
                     /db_xref="CDD:437889"
ORIGIN      
        1 mavgrdmpka vilrdmgtev qksvverrla evlalrdwis cfssgrvfry rltkdgrqal
       61 aqlmakaeqh rrartetttq sgisghiatf psadlsaakr aryglqetpl qtlsrltgrd
      121 gkpflsnemv ragerlredf elaqigqhva rerseftdep ratntdgspa reafqrasaa
      181 lcalgpglsd ialrccchle glevaerelg wsarsgkivl rialeqlhqh yeslppqnqm
      241 ig
//
LOCUS       WP_235935485              44 aa            linear   BCT 02-MAR-2025
DEFINITION  heme-binding protein [Devosia aurantiaca].
ACCESSION   WP_235935485
VERSION     WP_235935485.1
KEYWORDS    RefSeq.
SOURCE      Devosia aurantiaca
  ORGANISM  Devosia aurantiaca
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Devosiaceae; Devosia.
REFERENCE   1  (residues 1 to 44)
  AUTHORS   Ortiz de Orue Lucana,D., Bogel,G., Zou,P. and Groves,M.R.
  TITLE     The oligomeric assembly of the novel haem-degrading protein HbpS is
            essential for interaction with its cognate two-component sensor
            kinase
  JOURNAL   J Mol Biol 386 (4), 1108-1122 (2009)
   PUBMED   19244623
REFERENCE   2  (residues 1 to 44)
  AUTHORS   Pellicer,M.T., Badia,J., Aguilar,J. and Baldoma,L.
  TITLE     glc locus of Escherichia coli: characterization of genes encoding
            the subunits of glycolate oxidase and the glc regulator protein
  JOURNAL   J Bacteriol 178 (7), 2051-2059 (1996)
   PUBMED   8606183
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015862.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03928.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..44
                     /organism="Devosia aurantiaca"
                     /db_xref="taxon:2714858"
     Protein         1..44
                     /product="heme-binding protein"
                     /calculated_mol_wt=4204
     Region          <15..40
                     /region_name="GlcG"
                     /note="Heme-binding protein HbpS, GlcG/HbpS family [Signal
                     transduction mechanisms]; COG3193"
                     /db_xref="CDD:442426"
ORIGIN      
        1 mvvggglpvl vggdvvgaig vssgtpqqdm evaqasidhf lrgl
//
LOCUS       WP_235935223             934 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-1,6-glucosidase domain-containing protein
            [Cognatundibacterium crateris].
ACCESSION   WP_235935223
VERSION     WP_235935223.1
KEYWORDS    RefSeq.
SOURCE      Cognatundibacterium crateris
  ORGANISM  Cognatundibacterium crateris
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Cognatundibacterium.
REFERENCE   1  (residues 1 to 934)
  AUTHORS   Wattebled,F., Planchot,V., Dong,Y., Szydlowski,N., Pontoire,B.,
            Devin,A., Ball,S. and D'Hulst,C.
  TITLE     Further evidence for the mandatory nature of polysaccharide
            debranching for the aggregation of semicrystalline starch and for
            overlapping functions of debranching enzymes in Arabidopsis leaves
  JOURNAL   Plant Physiol 148 (3), 1309-1323 (2008)
   PUBMED   18815382
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023280.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11852.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..934
                     /organism="Cognatundibacterium crateris"
                     /db_xref="taxon:2528175"
     Protein         1..934
                     /product="alpha-1,6-glucosidase domain-containing protein"
                     /calculated_mol_wt=103342
     Region          62..932
                     /region_name="pullul_strch"
                     /note="alpha-1,6-glucosidases, pullulanase-type;
                     TIGR02103"
                     /db_xref="CDD:273974"
ORIGIN      
        1 mtetisllra irspsalall lmvassswat tspasaklsl adcdmpthqt vlhpsqlkqn
       61 dasaqwlspe lihwsgqkth sdaaqyrlyy snsaglhiah dgkmqgedgk laltpatrap
      121 akpdqaqfqy lpaglqfqle qdpdrirqll rsqliiaked gkgnvlsyth lqhaaaldal
      181 yigaqqatlg vslpgqgeks agthfqlwap tatqvaacvy kngkanasql slmsfdaapg
      241 twhttlkqnl sghyyrylvd vyvagngivr nlvtdpysis lntdsqrsyi adlnaanlkp
      301 agwdqqqrpq rvktatdmai yelhvrdfsi sddsvprrdr gkflafthnn skgmrhlsel
      361 sqagltdvhl lpifdiatip ekncinprin skgadpkaqt viakiaerdc fnwgydpyhy
      421 sapegsyasn pedgaarire frqlvmalhq aglrvgmdvv ynhtaytgqh arsvldrivp
      481 gyyhrqspsg kiedstcqpc gntatenkmm aklmtdsvrl wakqyqidsf rfdlmghqpr
      541 avmeelrdql aadngraiql igegwnfgev annqrfvqas qlslngsqia tfsdrardal
      601 rggghgdtpd sirqrqgyin gmldrpnssv tqaytqqekm raadmvrlgl agsvasyrmq
      661 tandtvlrlq didyngqpag yasqpgevvn yvenhdnqtl fdlnvyklpd nstpedrmrv
      721 qvlglgftll sqgipylhag seilrsksmd snsynsgdwf nvldwsyrsn gygrglppan
      781 dnqqfypllr tllentaipp aqsdilstka avldllkirq ssslfrlsds adisqrlrff
      841 ntgaqqnpal ivmqldgsnl pgeayrrivv ifnsadtaqm iqipelnnlp lqlhpvhqnt
      901 vagdrriare vrydaasaaf yvpkrsittf temn
//
LOCUS       WP_235935756             255 aa            linear   BCT 02-MAR-2025
DEFINITION  Hint domain-containing protein [Tritonibacter mobilis].
ACCESSION   WP_235935756
VERSION     WP_235935756.1
KEYWORDS    RefSeq.
SOURCE      Tritonibacter mobilis
  ORGANISM  Tritonibacter mobilis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Tritonibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13403.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Tritonibacter mobilis"
                     /db_xref="taxon:379347"
     Protein         1..255
                     /product="Hint domain-containing protein"
                     /calculated_mol_wt=27509
     Region          69..215
                     /region_name="Hint"
                     /note="Hedgehog/Intein domain, found in Hedgehog proteins
                     as well as proteins which contain inteins and undergo
                     protein splicing (e.g. DnaB, RIR1-2, GyrA and Pol). In
                     protein splicing an intervening polypeptide sequence - the
                     intein - is excised from a protein; cl22434"
                     /db_xref="CDD:451395"
ORIGIN      
        1 mtlpqslera aaniakakpl mpqaqalpgg srpqlrryev asllpngnpa etrhiapalp
       61 lfeqaftaft rgslietdfg pvaiedlypg drvltrdgsy qpliwkgmtt mvpghkaatg
      121 aqlsltsfma dslgmekpms cvvtgpsarl lrtpihlrha egdsplltpv vefidgmniv
      181 ettppapvdm yhlclaqhav ikvgglefet yhpgpdalkl vsypiktlfl nmfphadkis
      241 dfgalafdra rttqa
//
LOCUS       WP_235935834              94 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Tritonibacter mobilis].
ACCESSION   WP_235935834
VERSION     WP_235935834.1
KEYWORDS    RefSeq.
SOURCE      Tritonibacter mobilis
  ORGANISM  Tritonibacter mobilis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Tritonibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02371.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Tritonibacter mobilis"
                     /db_xref="taxon:379347"
     Protein         1..94
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=10381
     Region          <2..94
                     /region_name="COG3547"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442768"
ORIGIN      
        1 mgltprryqs gemdwsgris kcgdgtmrsl lfdaattlig rvqkfsalks wavrlagrrg
       61 fskaavatar klavlmltlw ktetefkwkk eaia
//
LOCUS       WP_235935838             386 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Tritonibacter mobilis].
ACCESSION   WP_235935838
VERSION     WP_235935838.1
KEYWORDS    RefSeq.
SOURCE      Tritonibacter mobilis
  ORGANISM  Tritonibacter mobilis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Tritonibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Tritonibacter mobilis"
                     /db_xref="taxon:379347"
     Protein         1..386
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=39134
     Region          14..370
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(18..19,22..23,26,58,107..108,110..112,115,134,
                     137..138,141,208,211..212,215..217,220,248,252,301..302,
                     306,310,327,330..331,334..335,338)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mltdlrtsav hgrafvvmgf cvgafaayvp qlkghaglsd aefglallig aagavgamwl
       61 apkvdrklga samaicslll aaafllpgla gswvtfagam flasgaggll dvvmnarlsg
      121 learsgrslm nlnhglfsla yalaalvagl vrkagvppiw cfigilgvta llalgmrdev
      181 paessdesvd aapvplpglm ialaglivli aftaeqateh wsalhlersf nanaaegalg
      241 pailgftmgi grlsgqelvr rvaegklmqi asalaasgli laafapvqpl ayagfailgl
      301 gvstvgptal awvgktipsh lraaaisrlv migycgffvg ppvigfvaea fglhlalalm
      361 ggmllcitaf lvpalratar ktglia
//
LOCUS       WP_235935907             217 aa            linear   BCT 02-MAR-2025
DEFINITION  M14 family zinc carboxypeptidase [Devosia aurantiaca].
ACCESSION   WP_235935907
VERSION     WP_235935907.1
KEYWORDS    RefSeq.
SOURCE      Devosia aurantiaca
  ORGANISM  Devosia aurantiaca
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Devosiaceae; Devosia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012471.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00246.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Devosia aurantiaca"
                     /db_xref="taxon:2714858"
     Protein         1..217
                     /product="M14 family zinc carboxypeptidase"
                     /GO_function="GO:0004181 - metallocarboxypeptidase
                     activity [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=24000
     Region          8..>173
                     /region_name="Peptidase_M14_like"
                     /note="M14 family of metallocarboxypeptidases and related
                     proteins; cl11393"
                     /db_xref="CDD:472171"
ORIGIN      
        1 mtdldvkfdr yytydemter lralvaayph latmtslaks fqgrdvwlie isnpktgpaa
       61 ekpgyyidgq ihaeehatsa aalyavfhll tkygedeeat rlvdsqvfyi lprinpdgae
      121 lslvppyynw cgngrfmpga drlegliped idgdgyivwm rvpdskgewk kappirtlws
      181 sasrakkaan ttafiprarc aismastsps kspstat
//
LOCUS       WP_235936048             163 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Devosia
            aurantiaca].
ACCESSION   WP_235936048
VERSION     WP_235936048.1
KEYWORDS    RefSeq.
SOURCE      Devosia aurantiaca
  ORGANISM  Devosia aurantiaca
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Devosiaceae; Devosia.
REFERENCE   1  (residues 1 to 163)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 163)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 163)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 163)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Devosia aurantiaca"
                     /db_xref="taxon:2714858"
     Protein         1..163
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=16988
     Region          4..>146
                     /region_name="MglA"
                     /note="ABC-type sugar transport system, ATPase component
                     [Carbohydrate transport and metabolism]; COG1129"
                     /db_xref="CDD:440745"
ORIGIN      
        1 msgatflsvr girksfgpvk vlhgvdldls rgsvtallge ngagkstfvr ilagdhrpdd
       61 gtievegtpt sfrtvtqsrn agirliaqei adaptlsvae nialgalpnr lgfvdrkamr
      121 nmaqkaldal gadlpldapv sslrlgnvrs srlpalplvp rna
//
LOCUS       WP_235936062             333 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase [Devosia aurantiaca].
ACCESSION   WP_235936062
VERSION     WP_235936062.1
KEYWORDS    RefSeq.
SOURCE      Devosia aurantiaca
  ORGANISM  Devosia aurantiaca
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Devosiaceae; Devosia.
REFERENCE   1  (residues 1 to 333)
  AUTHORS   Keller,N.P., Dischinger,H.C. Jr., Bhatnagar,D., Cleveland,T.E. and
            Ullah,A.H.
  TITLE     Purification of a 40-kilodalton methyltransferase active in the
            aflatoxin biosynthetic pathway
  JOURNAL   Appl Environ Microbiol 59 (2), 479-484 (1993)
   PUBMED   8434913
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013087.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00891.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Devosia aurantiaca"
                     /db_xref="taxon:2714858"
     Protein         1..333
                     /product="methyltransferase"
                     /GO_function="GO:0008171 - O-methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=37031
     Region          <191..314
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(203..209,227..228,253..255,270)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
ORIGIN      
        1 mnmsnlpqse qkwttsaagl psnsdeasaa falvdeflrt eiearalsfa lghglidfff
       61 msardaeela sfqemdrrgf klvldllisa nvlerdgdli dlsarfrsvl ayrdlleakm
      121 wfaalvapdv hqlfdmlltd vpafmrqagv felfrydlcl dvteanieat srwvsyttil
      181 taheapacve rlrdlnptrm ldvggnsgef arrtvsfvag lqatvfdlpv vcelgqrhva
      241 kfaeadrvhf ipgdlrndvl prgfdlisfk smlhdwpddy alsflqkafv aldpggslli
      301 feraeigvtg egmpysmvan lvfclfslrp alh
//
LOCUS       WP_235936159              71 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Devosia aurantiaca].
ACCESSION   WP_235936159
VERSION     WP_235936159.1
KEYWORDS    RefSeq.
SOURCE      Devosia aurantiaca
  ORGANISM  Devosia aurantiaca
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Devosiaceae; Devosia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024934.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13545.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Devosia aurantiaca"
                     /db_xref="taxon:2714858"
     Protein         1..71
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=7776
     Region          <1..49
                     /region_name="Crp"
                     /note="cAMP-binding domain of CRP or a regulatory subunit
                     of cAMP-dependent protein kinases [Signal transduction
                     mechanisms]; COG0664"
                     /db_xref="CDD:440428"
ORIGIN      
        1 mtqaeladtl glsavhlnrs lqelrglgli slrdhrlgvh dleglrelas fdplylhtht
       61 pgsqeparlr l
//
LOCUS       WP_235936401             497 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Brevibacterium rongguiense].
ACCESSION   WP_235936401
VERSION     WP_235936401.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium rongguiense
  ORGANISM  Brevibacterium rongguiense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Brevibacterium rongguiense"
                     /db_xref="taxon:2695267"
     Protein         1..497
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=49585
     Region          61..416
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(84,142..143,145..147,150,170,173..174,177,272,
                     275..276,279..281,284,309,313,381..382,386,390,406,
                     409..410,413..414)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340927"
ORIGIN      
        1 mtvpppatrp aagpgpaesp tdtaalrraa lrggivgnfv dqlhiflplt alapalpalv
       61 gddavagtaa laitatllgr plgavvfgrl adragrtrvt qaaiagtaac taaiallpdh
      121 raiggaamal vlllrfaggm flageytsav plamewakpr rrgllsglim amapwaqatv
      181 aastlillal lgpsayaayg wrcafgagal aslavllyyr rrvadarpap avarersatr
      241 gnpeaqggpe arcgtepaag svralvagaq arafwqvfal msglwlltnm vvlqlaaals
      301 ahtvgaalpa qaqplvmava avaqalvmsa tgqlstllgr rrffvaagll aaadgpavya
      361 llagsrglla vcllaaalqa vtvtaygpvg aylaerfpah qrsvgygaay svsivipaly
      421 plwlpplgvm lgsptaavgl vlalggllva gagalgpalr paeldaamar ptvgaggeag
      481 vqpdpahasa agrrggs
//
LOCUS       WP_235936543             143 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: twin-arginine translocase TatA/TatE family subunit
            [Brevibacterium].
ACCESSION   WP_235936543
VERSION     WP_235936543.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium
  ORGANISM  Brevibacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae.
REFERENCE   1  (residues 1 to 143)
  AUTHORS   Weiner,J.H., Bilous,P.T., Shaw,G.M., Lubitz,S.P., Frost,L.,
            Thomas,G.H., Cole,J.A. and Turner,R.J.
  TITLE     A novel and ubiquitous system for membrane targeting and secretion
            of cofactor-containing proteins
  JOURNAL   Cell 93 (1), 93-101 (1998)
   PUBMED   9546395
REFERENCE   2  (residues 1 to 143)
  AUTHORS   Settles,A.M., Yonetani,A., Baron,A., Bush,D.R., Cline,K. and
            Martienssen,R.
  TITLE     Sec-independent protein translocation by the maize Hcf106 protein
  JOURNAL   Science 278 (5342), 1467-1470 (1997)
   PUBMED   9367960
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014470.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02416.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Brevibacterium"
                     /db_xref="taxon:1696"
     Protein         1..143
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /GO_process="GO:0015031 - protein transport [Evidence
                     IEA]"
                     /calculated_mol_wt=15621
     Region          2..143
                     /region_name="TatA_B_E"
                     /note="mttA/Hcf106 family; cl00788"
                     /db_xref="CDD:445098"
ORIGIN      
        1 mflningtef lilvvvalvv igpkrmpeya qklrdlvkml rgkaeeakrs vqedfgddfk
       61 dvdwrkldpr qydprrivre alaeddgapt asgshasgag sadagspsag aqreepitpv
      121 qrharqaklr eadrpapfdp eat
//
LOCUS       WP_235936550             604 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Brevibacterium
            rongguiense].
ACCESSION   WP_235936550
VERSION     WP_235936550.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium rongguiense
  ORGANISM  Brevibacterium rongguiense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
REFERENCE   1  (residues 1 to 604)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 604)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 604)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 604)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Brevibacterium rongguiense"
                     /db_xref="taxon:2695267"
     Protein         1..604
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=63014
     Region          7..590
                     /region_name="YejF"
                     /note="ABC-type microcin C transport system, duplicated
                     ATPase component YejF [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG4172"
                     /db_xref="CDD:443332"
ORIGIN      
        1 medamtapep vldvrglsvr fgahpvthdv dlrvreasvl alvgesgsgk svtalslvgl
       61 aggsahaags avladgtqlv gappevlrav rglrigmvfq epmgacdpmy rvgrliaeal
      121 sahgervsre aararvltal raagladper iarsfphels ggqlqramia latihdpell
      181 iadepttald vtvqaeildl lrsiarerav llithdmgvv advaddvavm regriveaap
      241 veqlfahpqh aytrtllasv prltglgega eaqpearvra rseerakdgp aaphapdgaa
      301 asnaqggara strppqpaga haqgaqgapr aeqrgedspa arlheavvvh ggrggtrald
      361 gvslevprgt vvglvgesgs gkstianvlv gqqaltsgwa evagtrvrpg ngreqrrvra
      421 rigtvfqdpa gslnprrtvg aqlaqplrth tdlghgairq rvaalldevr lpagtgermp
      481 helsggqkqr vsiaralald pdlliadept saldvsvqag vlellrelhd erafaslfis
      541 hdlavieqia ahvvvlrgga vvesggaeqv lrrptsdytr elisaapvad piaqarrrea
      601 arah
//
LOCUS       WP_235936693             431 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Steroidobacter agaridevorans].
ACCESSION   WP_235936693
VERSION     WP_235936693.1
KEYWORDS    RefSeq.
SOURCE      Steroidobacter agaridevorans
  ORGANISM  Steroidobacter agaridevorans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Steroidobacterales; Steroidobacteraceae; Steroidobacter.
REFERENCE   1  (residues 1 to 431)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 431)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 431)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 431)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Steroidobacter agaridevorans"
                     /db_xref="taxon:2695856"
     Protein         1..431
                     /product="ATP-binding protein"
                     /calculated_mol_wt=46642
     Region          11..424
                     /region_name="ActS_PrrB_HisK"
                     /note="ActS/PrrB/RegB family redox-sensitive histidine
                     kinase; NF033792"
                     /db_xref="CDD:468186"
ORIGIN      
        1 mnavpshidt anrknlalli qlrwmavlgq vvtiaivhfg lriplplapm amvlgallal
       61 nalshlwlrq hlhissqalf sallldvaal tvqlyfsgga tnpftalyll qialaavllp
      121 grgawlivvv tcvafvglig inqplavqpp tsllrlhilg mfvcfvlgav llvifisrms
      181 rnlqerdiyl velkrraaee dhivriglla sgaahelgtp lasvsvilgd wrrmpeisqn
      241 pemlqellem qaairrcksi lsgillsage argeapvvts lhrfldeiar dwsdgrpsgt
      301 lqyhagsgal gedtrivsdp alkqvvtnll dnafevspgw vrlnaerrgd mlrievldlg
      361 pgftpemlen fgkpynstkg rrggglglfl vvnvirklgg svsahnrqpg gatvtvelpl
      421 aaleyrekdr g
//
LOCUS       WP_235936908             212 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2201 family putative metallopeptidase [Vreelandella azerica].
ACCESSION   WP_235936908
VERSION     WP_235936908.1
KEYWORDS    RefSeq.
SOURCE      Vreelandella azerica
  ORGANISM  Vreelandella azerica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024601.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13203.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Vreelandella azerica"
                     /db_xref="taxon:2732867"
     Protein         1..212
                     /product="DUF2201 family putative metallopeptidase"
                     /calculated_mol_wt=23665
     Region          39..>119
                     /region_name="COG3864"
                     /note="Predicted metal-dependent peptidase [General
                     function prediction only]"
                     /db_xref="CDD:443073"
ORIGIN      
        1 mtdsmgvycs ssfaslslla qqelskwqqd rerwettlpv mswmsqfltl tptaedqahf
       61 astdgrhlyf sptlsatltd eervflqahl iwhcvaghla aplvaspkrw hlacdheins
      121 lllelglslp skalifpici glkaiqvyew lsahprldde gsmdihpaal wthdlaclpd
      181 lslialwrrr ahvavrespa lparvadfca tr
//
LOCUS       WP_235936933             177 aa            linear   BCT 02-MAR-2025
DEFINITION  MOSC N-terminal beta barrel domain-containing protein [Vreelandella
            azerica].
ACCESSION   WP_235936933
VERSION     WP_235936933.1
KEYWORDS    RefSeq.
SOURCE      Vreelandella azerica
  ORGANISM  Vreelandella azerica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
REFERENCE   1  (residues 1 to 177)
  AUTHORS   Anantharaman,V. and Aravind,L.
  TITLE     MOSC domains: ancient, predicted sulfur-carrier domains, present in
            diverse metal-sulfur cluster biosynthesis proteins including
            Molybdenum cofactor sulfurases
  JOURNAL   FEMS Microbiol Lett 207 (1), 55-61 (2002)
   PUBMED   11886751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015441.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03476.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Vreelandella azerica"
                     /db_xref="taxon:2732867"
     Protein         1..177
                     /product="MOSC N-terminal beta barrel domain-containing
                     protein"
                     /calculated_mol_wt=19908
     Region          1..>134
                     /region_name="YcbX"
                     /note="N-hydroxylaminopurine reductase subunit YcbX,
                     contains MOSC domain [Nucleotide transport and metabolism,
                     Defense mechanisms]; COG3217"
                     /db_xref="CDD:442450"
ORIGIN      
        1 mqvnalycyp vksmqgirld qarlyrhgfe wdrrwmlvdr qqcfvtqrql palaalkvai
       61 tdsalvlshp qagsievple tpssaaqsvr vwqddcqaqp espqitewle salgsaaqgl
      121 rlmrfadgft ravaedafgh qqahtflptv tptwspqrll cmrltrrlvk kasmrcp
//
LOCUS       WP_235936935             291 aa            linear   BCT 02-MAR-2025
DEFINITION  OmpA family protein [Vreelandella azerica].
ACCESSION   WP_235936935
VERSION     WP_235936935.1
KEYWORDS    RefSeq.
SOURCE      Vreelandella azerica
  ORGANISM  Vreelandella azerica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012894.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00691.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Vreelandella azerica"
                     /db_xref="taxon:2732867"
     Protein         1..291
                     /product="OmpA family protein"
                     /calculated_mol_wt=32422
     Region          2..239
                     /region_name="motB"
                     /note="flagellar motor protein MotB; Reviewed; PRK08944"
                     /db_xref="CDD:236356"
ORIGIN      
        1 mffvlllsfa eidadkfrri agelskafgv qrdieamqip kgtsaaldkf spavpdrtll
       61 deirqrtmee qsqlesmrqi leqqrrqqtr elaeeirall detgnsevtq vevdgfrvvi
      121 rieergsfms gssnvtmsfa tlladmaaif aglpgtvaie ghtdnvpirt arfesnwdls
      181 amraasvanv lltddelspe rilvqgfadt eprasndtpe graqnrrvei nidlseaieq
      241 rgqreldalr qaeepqtgvs nnqeetfeil ddaairngee vieprsplfp q
//
LOCUS       WP_235936957             370 aa            linear   BCT 02-MAR-2025
DEFINITION  CBS domain-containing protein [Vreelandella azerica].
ACCESSION   WP_235936957
VERSION     WP_235936957.1
KEYWORDS    RefSeq.
SOURCE      Vreelandella azerica
  ORGANISM  Vreelandella azerica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
REFERENCE   1  (residues 1 to 370)
  AUTHORS   Scott,J.W., Hawley,S.A., Green,K.A., Anis,M., Stewart,G.,
            Scullion,G.A., Norman,D.G. and Hardie,D.G.
  TITLE     CBS domains form energy-sensing modules whose binding of adenosine
            ligands is disrupted by disease mutations
  JOURNAL   J Clin Invest 113 (2), 274-284 (2004)
   PUBMED   14722619
REFERENCE   2  (residues 1 to 370)
  AUTHORS   Kemp,B.E.
  TITLE     Bateman domains and adenosine derivatives form a binding contract
  JOURNAL   J Clin Invest 113 (2), 182-184 (2004)
   PUBMED   14722609
REFERENCE   3  (residues 1 to 370)
  AUTHORS   Janosik,M., Kery,V., Gaustadnes,M., Maclean,K.N. and Kraus,J.P.
  TITLE     Regulation of human cystathionine beta-synthase by
            S-adenosyl-L-methionine: evidence for two catalytically active
            conformations involving an autoinhibitory domain in the C-terminal
            region
  JOURNAL   Biochemistry 40 (35), 10625-10633 (2001)
   PUBMED   11524006
REFERENCE   4  (residues 1 to 370)
  AUTHORS   Zhang,R., Evans,G., Rotella,F.J., Westbrook,E.M., Beno,D.,
            Huberman,E., Joachimiak,A. and Collart,F.R.
  TITLE     Characteristics and crystal structure of bacterial
            inosine-5'-monophosphate dehydrogenase
  JOURNAL   Biochemistry 38 (15), 4691-4700 (1999)
   PUBMED   10200156
REFERENCE   5  (residues 1 to 370)
  AUTHORS   Ponting,C.P.
  TITLE     CBS domains in CIC chloride channels implicated in myotonia and
            nephrolithiasis (kidney stones)
  JOURNAL   J Mol Med (Berl) 75 (3), 160-163 (1997)
   PUBMED   9106071
REFERENCE   6  (residues 1 to 370)
  AUTHORS   Bateman,A.
  TITLE     The structure of a domain common to archaebacteria and the
            homocystinuria disease protein
  JOURNAL   Trends Biochem Sci 22 (1), 12-13 (1997)
   PUBMED   9020585
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012780.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00571.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Vreelandella azerica"
                     /db_xref="taxon:2732867"
     Protein         1..370
                     /product="CBS domain-containing protein"
                     /calculated_mol_wt=41268
     Region          9..124
                     /region_name="CBS_pair_GGDEF_PAS_repeat1"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains found in diguanylate
                     cyclase/phosphodiesterase proteins with PAS sensors,
                     repeat 1; cd09833"
                     /db_xref="CDD:341403"
     Site            order(12,14..16,38..40,102,115,117,119..120,123)
                     /site_type="other"
                     /note="putative ligand binding site II [chemical binding]"
                     /db_xref="CDD:341403"
     Region          12..75
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341403"
     Site            order(38,50,54..55,58,80,102..104,119)
                     /site_type="other"
                     /note="putative ligand binding site I [chemical binding]"
                     /db_xref="CDD:341403"
     Region          80..123
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341403"
     Region          130..263
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
     Site            order(141,143..145,167..169,232,245,247,249..250,253)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:341358"
     Region          141..205
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
     Site            order(167,181,186..187,190,210,232..234,249)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:341358"
     Region          210..253
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
     Region          273..>362
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
ORIGIN      
        1 mnqdlpisri mqtgilqcsp etplcdaaqq maqrhcssil vvkdgqpvgi wtehdalsid
       61 fsdgrsvkep issrmsypva sidaslpmge atlrfhssgr rhllvvdsdn qplgiisqtd
      121 ialnqglepy lrlrevhaam rklplvlpgs llladaarqm qskkheaavv tlsgsdthel
      181 gilterdlvr fvarhpgktp isllasrpll tieegaallk ardmlinhri rhlavldhqg
      241 hvsgllgfrd llvgaeqlyl qdlrdaleqr dnalatsrqh lqlaqrvids slegiiitdp
      301 qtriefinpa ftqmtgysle dvigktpril ssgrqddffy qqmwetlkeh gywrgevwnr
      361 kkavsftwnc
//
LOCUS       WP_235936991             295 aa            linear   BCT 02-MAR-2025
DEFINITION  magnesium transporter MgtE N-terminal domain-containing protein
            [Vreelandella azerica].
ACCESSION   WP_235936991
VERSION     WP_235936991.1
KEYWORDS    RefSeq.
SOURCE      Vreelandella azerica
  ORGANISM  Vreelandella azerica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
REFERENCE   1  (residues 1 to 295)
  AUTHORS   Hattori,M., Tanaka,Y., Fukai,S., Ishitani,R. and Nureki,O.
  TITLE     Crystal structure of the MgtE Mg2+ transporter
  JOURNAL   Nature 448 (7157), 1072-1075 (2007)
   PUBMED   17700703
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015413.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03448.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Vreelandella azerica"
                     /db_xref="taxon:2732867"
     Protein         1..295
                     /product="magnesium transporter MgtE N-terminal
                     domain-containing protein"
                     /calculated_mol_wt=32934
     Region          9..>287
                     /region_name="MgtE"
                     /note="Mg/Co/Ni transporter MgtE (contains CBS domain)
                     [Inorganic ion transport and metabolism]; COG2239"
                     /db_xref="CDD:441840"
ORIGIN      
        1 mredepynqt eeqllqlqql ldtsdgagid dlladmdvld iartlesfpg ktrdllwefv
       61 pedvvgevla evdedirady ieplsaddig qivkgldaqe vaevldvadd diktsvyasl
      121 degiraqvey lhtyeedvvg rymdpetvnv kqgvsleavq ryirihhlld desqqvmvtd
      181 kdkrllgtlt lidlikqpqd aviddymdep ftlndqmrvn eaasilrske lafvpvcnke
      241 gilvgqlnva dvleitqdda dmtlkhmsgv sdeeevftpi mrsaksrgsg wasic
//
LOCUS       WP_235937096             421 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleoside recognition domain-containing protein [Vreelandella
            azerica].
ACCESSION   WP_235937096
VERSION     WP_235937096.1
KEYWORDS    RefSeq.
SOURCE      Vreelandella azerica
  ORGANISM  Vreelandella azerica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
REFERENCE   1  (residues 1 to 421)
  AUTHORS   Hantke,K.
  TITLE     Is the bacterial ferrous iron transporter FeoB a living fossil?
  JOURNAL   Trends Microbiol 11 (5), 192-195 (2003)
   PUBMED   12781516
REFERENCE   2  (residues 1 to 421)
  AUTHORS   Loewen,S.K., Ng,A.M., Yao,S.Y., Cass,C.E., Baldwin,S.A. and
            Young,J.D.
  TITLE     Identification of amino acid residues responsible for the
            pyrimidine and purine nucleoside specificities of human
            concentrative Na(+) nucleoside cotransporters hCNT1 and hCNT2
  JOURNAL   J Biol Chem 274 (35), 24475-24484 (1999)
   PUBMED   10455109
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019292.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07670.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Vreelandella azerica"
                     /db_xref="taxon:2732867"
     Protein         1..421
                     /product="nucleoside recognition domain-containing
                     protein"
                     /calculated_mol_wt=44976
     Region          21..214
                     /region_name="SpmA"
                     /note="Spore maturation protein SpmA (function unknown)
                     [General function prediction only]; COG2715"
                     /db_xref="CDD:442028"
     Region          247..421
                     /region_name="SpmB"
                     /note="Spore maturation protein SpmB (function unknown)
                     [Function unknown]; COG0700"
                     /db_xref="CDD:440464"
ORIGIN      
        1 mslfihartl whhvkrhlvk lfiaafaasl wqwliggdhe vfarlvqslf dmarvsvdii
       61 lvllgtmtlw lgflsiaeka glirllgral dplfsrlmpe vppghpamgl ismnfaanil
      121 gldnaatpig ikamhslqel npsrdtasna qilflvlnts sltllpvtif myraqqgaed
      181 ptlvflpill atstsslagl lvvaivqrik lwqpvilayl laaalslgll lttlagmsaq
      241 alaaastlvg nltlfsivml flcvaalrgv kvydafiega kegvsftitl lpyliamlva
      301 vgvlrasgvl dgglsiirwl iegvgwdtqf vdalptafvk plsgsgaram mietmdtfgv
      361 dsfpgllaat mqgstettfy vlavyfgavg itrirhglgc alfadaagii tailvcywff
      421 g
//
LOCUS       WP_235937103             128 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein
            [Vreelandella azerica].
ACCESSION   WP_235937103
VERSION     WP_235937103.1
KEYWORDS    RefSeq.
SOURCE      Vreelandella azerica
  ORGANISM  Vreelandella azerica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Vreelandella azerica"
                     /db_xref="taxon:2732867"
     Protein         1..128
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=13713
     Region          38..>112
                     /region_name="ABC_6TM_exporters"
                     /note="Six-transmembrane helical domain of the ATP-binding
                     cassette transporters; cl38913"
                     /db_xref="CDD:365789"
     Region          59..108
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:349983"
ORIGIN      
        1 msqrpnhrvl frllsllrpy rlrlalagla lllasgsvla lgnglrlvid ngflaedaqa
       61 lgktlglmlg vvsvlamasa lryyqvswig erlaadlrqq vfdhllslep sflkapakga
      121 qpvisprg
//
LOCUS       WP_235937122             226 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Vreelandella azerica].
ACCESSION   WP_235937122
VERSION     WP_235937122.1
KEYWORDS    RefSeq.
SOURCE      Vreelandella azerica
  ORGANISM  Vreelandella azerica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12697.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Vreelandella azerica"
                     /db_xref="taxon:2732867"
     Protein         1..226
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=24670
     Region          25..216
                     /region_name="Abhydrolase_11"
                     /note="Alpha/beta hydrolase domain; pfam20408"
                     /db_xref="CDD:466557"
ORIGIN      
        1 mqagacgrfy vdnhipvtlq gsaekgcllf ahgagagqes dfvrqfatsa aqdgiqlmtf
       61 dftymqrmni egrrrppaki eqlvtemsaw yesllaatdq piwvggksmg grvasllaaq
      121 rqvpgviiag ypfhpprspd klrlahwgdv sapsliiqge rdpfgrrdev aayslpante
      181 vewlvtgdhd fkplrasgwd qsaliqqatr kaanfmlthr dvngvc
//
LOCUS       WP_235937182             260 aa            linear   BCT 02-MAR-2025
DEFINITION  2Fe-2S iron-sulfur cluster-binding protein [Vreelandella azerica].
ACCESSION   WP_235937182
VERSION     WP_235937182.1
KEYWORDS    RefSeq.
SOURCE      Vreelandella azerica
  ORGANISM  Vreelandella azerica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024900.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13510.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Vreelandella azerica"
                     /db_xref="taxon:2732867"
     Protein         1..260
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /calculated_mol_wt=27599
     Region          7..227
                     /region_name="PRK07569"
                     /note="bidirectional hydrogenase complex protein HoxU;
                     Validated"
                     /db_xref="CDD:181037"
ORIGIN      
        1 mnqetftltl dgaavtaypg dtlwqvakra getiphlcfk daegyradgn cracmvevqg
       61 eralvasclr eakpgmvvhs atsersrvar egvlemlavd qppreqspda sshfwamadq
      121 laidvgevse rlpkrsertt ptvhhvaere savvkdrshs amavnldaci ecnlcvracr
      181 evqvndvigl ahrgsaskiv fdfddpmgds tcvacgecvq acptgalmpa tlvdehgggt
      241 vprpinrstp sapiaasaas
//
LOCUS       WP_235937145             275 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Vreelandella
            azerica].
ACCESSION   WP_235937145
VERSION     WP_235937145.1
KEYWORDS    RefSeq.
SOURCE      Vreelandella azerica
  ORGANISM  Vreelandella azerica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
REFERENCE   1  (residues 1 to 275)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 275)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 275)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 275)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 275)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 275)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 275)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 275)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 275)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Vreelandella azerica"
                     /db_xref="taxon:2732867"
     Protein         1..275
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=30897
     Region          135..270
                     /region_name="Nucleotidyl_cyc_III"
                     /note="Class III nucleotidyl cyclases; cl11967"
                     /db_xref="CDD:448371"
     Site            order(160,203)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143637"
ORIGIN      
        1 mpafltllal sallmhigqg inpyiprlll lgclylvvgq aafqsssdts plwfglpiav
       61 smiflplipa lalnilllpi wwwlltqsgd medwkniltl llllalprwe hlrrqallfa
      121 tdpndsecna yqsdalkerl rneyqrssil gnrlavlvih lpqfdmageq fgrkaqltll
      181 etlcnevnds crdhdllgra sqatfwlvlp dtsesgallv rerlkhslsc cvlvetgqlv
      241 adivaylprh qevfhlfiqr leershaiak slpet
//
LOCUS       WP_235937183             168 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3305 domain-containing protein [Vreelandella azerica].
ACCESSION   WP_235937183
VERSION     WP_235937183.1
KEYWORDS    RefSeq.
SOURCE      Vreelandella azerica
  ORGANISM  Vreelandella azerica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023177.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11749.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Vreelandella azerica"
                     /db_xref="taxon:2732867"
     Protein         1..168
                     /product="DUF3305 domain-containing protein"
                     /calculated_mol_wt=18766
     Region          <44..128
                     /region_name="DUF3305"
                     /note="Protein of unknown function (DUF3305); pfam11749"
                     /db_xref="CDD:463341"
ORIGIN      
        1 mhdnqrpfsv tlteeskkvg rfsirqwrlg qltpgeqgph vvwlqlsmte raayrfnlrs
       61 dtpqlfvrag fsgdvpapet isasqevaag wmdgeqqvfe apmpmaiqvw iegylarhge
      121 apvegrkkna rapgghvscq lpavasnrle krqkrvrqiv rsqayesl
//
LOCUS       WP_235937244             444 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Vreelandella azerica].
ACCESSION   WP_235937244
VERSION     WP_235937244.1
KEYWORDS    RefSeq.
SOURCE      Vreelandella azerica
  ORGANISM  Vreelandella azerica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
REFERENCE   1  (residues 1 to 444)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Vreelandella azerica"
                     /db_xref="taxon:2732867"
     Protein         1..444
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=48049
     Region          17..384
                     /region_name="FrvX"
                     /note="Putative aminopeptidase FrvX [Amino acid transport
                     and metabolism, Carbohydrate transport and metabolism];
                     COG1363"
                     /db_xref="CDD:440974"
ORIGIN      
        1 msersantqp waqpmpekqf elmrdilaap spvglegamt ygvlkphfes fapkswqlhq
       61 frgnagvvld thpgqddmfk lmiighadki rmqvrsiged gkiwintdsf lptvlighev
      121 klfsedpeap gsyrsieggt vealgaihfs dpavrtgdkg ikkeqiyldl qihgenkkqq
      181 vlnlgvrpgd siifdrpirp gfspdtfyga yldnglgcfv taevarliae aggtqqvrvm
      241 faiasyeeig rfgsrvfage lkpdaligvd vnhdyvaapg igdkrmqple mgkgftmavg
      301 siaseqlnrv iakaasdnei pmqrdivgvd tgtdgmagvl asvdsaatsi gfpirnmhti
      361 setgntqdvl aaihalthti ksldgikdlk refldnhprl dmasplahqg sakpdeakee
      421 pqkgakketp takdtkakkt kkgk
//
LOCUS       WP_235937261             103 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Vreelandella azerica].
ACCESSION   WP_235937261
VERSION     WP_235937261.1
KEYWORDS    RefSeq.
SOURCE      Vreelandella azerica
  ORGANISM  Vreelandella azerica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
REFERENCE   1  (residues 1 to 103)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 103)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 103)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 103)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Vreelandella azerica"
                     /db_xref="taxon:2732867"
     Protein         1..103
                     /product="ATP-binding protein"
                     /calculated_mol_wt=11307
     Region          1..>88
                     /region_name="gyrB"
                     /note="DNA gyrase subunit B; Provisional; PRK14939"
                     /db_xref="CDD:237860"
ORIGIN      
        1 mseqaydsss ikvlkgldav rkrpgmyigd tddgtglhhm vfelvdnsid ealaghcsei
       61 rviihpdesi svsdngrgip telheergcv srrshydgas rrw
//
LOCUS       WP_235937282             285 aa            linear   BCT 02-MAR-2025
DEFINITION  TolC family protein [Vreelandella azerica].
ACCESSION   WP_235937282
VERSION     WP_235937282.1
KEYWORDS    RefSeq.
SOURCE      Vreelandella azerica
  ORGANISM  Vreelandella azerica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
REFERENCE   1  (residues 1 to 285)
  AUTHORS   Johnson,J.M. and Church,G.M.
  TITLE     Alignment and structure prediction of divergent protein families:
            periplasmic and outer membrane proteins of bacterial efflux pumps
  JOURNAL   J Mol Biol 287 (3), 695-715 (1999)
   PUBMED   10092468
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02321.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Vreelandella azerica"
                     /db_xref="taxon:2732867"
     Protein         1..285
                     /product="TolC family protein"
                     /GO_function="GO:0015562 - efflux transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=32011
     Region          12..>281
                     /region_name="tolC"
                     /note="outer membrane channel protein; Reviewed; cl30340"
                     /db_xref="CDD:357216"
ORIGIN      
        1 mfhsqyihsv isifagllmv tgvtaeqahg glldiyqlak dndpifqeqf ygkqatdely
       61 yqarsallpq vsvtanqsqt yqnirqsdnq sfdsgsvsyp strygasisq svydysrwas
      121 fsqaqeeirq aaselevvrq nllyrvaery fnalsiyenl sylqaekesv eanyqevlar
      181 fedglarsed mldaqarleq vrarelevqn alrdaieala emtgtppqql vllgsdlqls
      241 rpdpdsqeaw eslalerspq lraaelatev vnrsidvrrg gtfll
//
LOCUS       WP_235937289             560 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar filament capping protein FliD [Vreelandella azerica].
ACCESSION   WP_235937289
VERSION     WP_235937289.1
KEYWORDS    RefSeq.
SOURCE      Vreelandella azerica
  ORGANISM  Vreelandella azerica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
REFERENCE   1  (residues 1 to 560)
  AUTHORS   Tasteyre,A., Karjalainen,T., Avesani,V., Delmee,M., Collignon,A.,
            Bourlioux,P. and Barc,M.C.
  TITLE     Molecular characterization of fliD gene encoding flagellar cap and
            its expression among Clostridium difficile isolates from different
            serogroups
  JOURNAL   J Clin Microbiol 39 (3), 1178-1183 (2001)
   PUBMED   11230454
REFERENCE   2  (residues 1 to 560)
  AUTHORS   Arora,S.K., Ritchings,B.W., Almira,E.C., Lory,S. and Ramphal,R.
  TITLE     The Pseudomonas aeruginosa flagellar cap protein, FliD, is
            responsible for mucin adhesion
  JOURNAL   Infect Immun 66 (3), 1000-1007 (1998)
   PUBMED   9488388
REFERENCE   3  (residues 1 to 560)
  AUTHORS   Chen,L. and Helmann,J.D.
  TITLE     The Bacillus subtilis sigma D-dependent operon encoding the
            flagellar proteins FliD, FliS, and FliT
  JOURNAL   J Bacteriol 176 (11), 3093-3101 (1994)
   PUBMED   8195064
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07195.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Vreelandella azerica"
                     /db_xref="taxon:2732867"
     gene            1..560
                     /gene="fliD"
     Protein         1..560
                     /product="flagellar filament capping protein FliD"
                     /GO_component="GO:0009288 - bacterial-type flagellum
                     [Evidence IEA]"
                     /GO_process="GO:0007155 - cell adhesion [Evidence IEA]"
                     /calculated_mol_wt=58031
     Region          2..552
                     /region_name="FliD"
                     /note="Flagellar capping protein FliD [Cell motility];
                     COG1345"
                     /db_xref="CDD:440956"
ORIGIN      
        1 msisslgigs gldlnglldq lrdaergklk pieqqreieq tkisaygrle selsefqsna
       61 svlsntslye slstntrges vsaaadetam pgsynidvtt lasrgtlasa gvtapdtsis
      121 anidqqmeft fgdgskrnva itadssledi rdainaddna gvnatiindg sgtnefrlal
      181 ssretgadas issfalegtd ltpdgsgaea gqlaitiada aaatvtginl vidgtpldtt
      241 gidfatdvts gttladqlqs ldaidtaiyt dgeltittav geaitidggs altdegvgvg
      301 tdgeptggtg stgthqagtd anlkvngiti tsannqvega iqgvtlnlqs egastvaveq
      361 dtravreavt gfvdsynslk vsigeltsfn qetgqageln gdntvrrves tlrsalsgsv
      421 tsngegfsml sdigiaveld gslsvdegrl ddailnnqqa lsnffagsvq atglaeqidt
      481 riaqmlssdg tvqgainsse nrveslndry trteqsiert igryreqfsq ldamiaqmnq
      541 tsdyltnqfs aleaqmnqgr
//
LOCUS       WP_235937327             459 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Rahnella contaminans].
ACCESSION   WP_235937327
VERSION     WP_235937327.1
KEYWORDS    RefSeq.
SOURCE      Rahnella contaminans
  ORGANISM  Rahnella contaminans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Rahnella.
REFERENCE   1  (residues 1 to 459)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Rahnella contaminans"
                     /db_xref="taxon:2703882"
     Protein         1..459
                     /product="AMP-binding protein"
                     /calculated_mol_wt=50298
     Region          44..459
                     /region_name="MenE/FadK"
                     /note="O-succinylbenzoic acid-CoA ligase MenE or related
                     acyl-CoA synthetase (AMP-forming) [Lipid transport and
                     metabolism]; COG0318"
                     /db_xref="CDD:440087"
ORIGIN      
        1 mdsqkasaqa vtlpmcqwlg teraddhlva wsatreyrqr dfrrdvatlf asvsvtpcsr
       61 walclednys favallavly sgktpvlpgh frqaqlseqc defdalitdl plqlncpvlr
      121 fpfvtlepls vlpafpenas lvlftsgstg kpqkiikpvs cleresqwls aqwgaelags
      181 rfvatvaphh myglsfafml plslglpfaa tsvqyheqlh slavktplaf vsspaflkrl
      241 dstlapvtlr avfsaggple sdaaqsvkat csclpteiyg ttesgiiafr qqtrpgeawa
      301 lfnnvdlrpq pdgniavisp iipqpegial sdeiklssdg srhfdllgrk drivkiaeqr
      361 isldeieqrl caldlladac vltlekqgrv svaalivltp agdallqven rnvlfgqirh
      421 alrewvspvs lprywrivpa iplnqqgkra aaelqemfl
//
LOCUS       WP_235937401             295 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Rahnella contaminans].
ACCESSION   WP_235937401
VERSION     WP_235937401.1
KEYWORDS    RefSeq.
SOURCE      Rahnella contaminans
  ORGANISM  Rahnella contaminans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Rahnella.
REFERENCE   1  (residues 1 to 295)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 295)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Rahnella contaminans"
                     /db_xref="taxon:2703882"
     Protein         1..295
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=32799
     Region          1..137
                     /region_name="MarR"
                     /note="DNA-binding transcriptional regulator, MarR family
                     [Transcription]; COG1846"
                     /db_xref="CDD:441451"
     Region          161..>245
                     /region_name="Acetyltransf_1"
                     /note="Acetyltransferase (GNAT) family; pfam00583"
                     /db_xref="CDD:395465"
     Region          <212..286
                     /region_name="Acetyltransf_10"
                     /note="Acetyltransferase (GNAT) domain; pfam13673"
                     /db_xref="CDD:463953"
     Site            order(219..221,231..232)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
ORIGIN      
        1 mmsaihtirt elrylvrelg lldkncfrsg lsltqahllt ylskngvtsf aelclqlsmd
       61 kaslsrtlsv lvgknyvepv sgikdkrqkn fqltaagaqs lataddaadn efsfidnqme
      121 lqdaqaving lralrmnafr rnaarhpqri qieimrsnyq pevtkllset faqeqnipae
      181 lislpphlks qcwivrsgey vlgtvagwhe nnhwhwgrfa vnpgyrgmgi gkqlarvsla
      241 emlaktdkvl ldardstvki itdlggvitg pttdfygmpi tsmrltkedf ekata
//
LOCUS       WP_235937438             268 aa            linear   BCT 02-MAR-2025
DEFINITION  inositol monophosphatase family protein [Rahnella contaminans].
ACCESSION   WP_235937438
VERSION     WP_235937438.1
KEYWORDS    RefSeq.
SOURCE      Rahnella contaminans
  ORGANISM  Rahnella contaminans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Rahnella.
REFERENCE   1  (residues 1 to 268)
  AUTHORS   York,J.D., Ponder,J.W., Chen,Z.W., Mathews,F.S. and Majerus,P.W.
  TITLE     Crystal structure of inositol polyphosphate 1-phosphatase at 2.3-A
            resolution
  JOURNAL   Biochemistry 33 (45), 13164-13171 (1994)
   PUBMED   7947723
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012673.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00459.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Rahnella contaminans"
                     /db_xref="taxon:2703882"
     Protein         1..268
                     /product="inositol monophosphatase family protein"
                     /calculated_mol_wt=28983
     Region          11..229
                     /region_name="FIG"
                     /note="FBPase/IMPase/glpX-like domain. A superfamily of
                     metal-dependent phosphatases with various substrates.
                     Fructose-1,6-bisphospatase (both the major and the
                     glpX-encoded variant) hydrolyze fructose-1,6,-bisphosphate
                     to fructose-6-phosphate in...; cl00289"
                     /db_xref="CDD:469707"
     Site            order(50,73..74,88..92,213)
                     /site_type="active"
                     /db_xref="CDD:238814"
ORIGIN      
        1 mmthttmsak lvlasqitaq aaelalgffn rrdsievssk rtqdfvsead vaveqfiraq
       61 laqhfpqdai igeelggvlt dascwvidpi dgtsnflrgs plwgvslglv erkkpvigvv
      121 alpvlnelfa agsgqgifhn gkpfrrddrf gdvqivslgd ssddkldeas sfyqglraae
      181 wsvhcyrctt vgmvfaakgi idghlqrrtt lwdiaggavi cqeagletrv nftqlpdgtd
      241 nyrhmsvaag tanllsvvqp lwpdfspk
//
LOCUS       WP_235937494             176 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6795 domain-containing protein [Marinobacter caseinilyticus].
ACCESSION   WP_235937494
VERSION     WP_235937494.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter caseinilyticus
  ORGANISM  Marinobacter caseinilyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042847.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20598.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Marinobacter caseinilyticus"
                     /db_xref="taxon:2692195"
     Protein         1..176
                     /product="DUF6795 domain-containing protein"
                     /calculated_mol_wt=20241
     Region          50..152
                     /region_name="DUF6795"
                     /note="Domain of unknown function (DUF6795); pfam20598"
                     /db_xref="CDD:466747"
ORIGIN      
        1 mpkspltfnl ahytlfsval llctvlgsie vnagmfgffk qynvhlspev kgritingts
       61 ipdieieril dydqeyiett rtdqhgrfyf paknikssrp gklldesrir qviglsyqgq
      121 ryllwyttts slvaeqvlve klnnlscdla npekrhefri henpsfyhvi lsicrw
//
LOCUS       WP_235937781             181 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing protein [Pseudoroseicyclus tamaricis].
ACCESSION   WP_235937781
VERSION     WP_235937781.1
KEYWORDS    RefSeq.
SOURCE      Pseudoroseicyclus tamaricis
  ORGANISM  Pseudoroseicyclus tamaricis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Pseudoroseicyclus.
REFERENCE   1  (residues 1 to 181)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13328.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Pseudoroseicyclus tamaricis"
                     /db_xref="taxon:2705421"
     Protein         1..181
                     /product="HD domain-containing protein"
                     /calculated_mol_wt=18802
     Region          20..143
                     /region_name="HDc"
                     /note="Metal dependent phosphohydrolases with conserved
                     'HD' motif; cl21469"
                     /db_xref="CDD:473873"
ORIGIN      
        1 msdlavfara adlaarahvg qrrkggdvpy vghvlevaml vaeaggsaee vtaavlhdvv
       61 edsditldal aegygpevar lvegctddpa wadlprperk srqaahlpge pegvkrikla
      121 dqtsnvrdis rlpeawppsd aaeylegaer vvaacrgasp aleaafdaav aeamqksggt
      181 p
//
LOCUS       WP_235937836             378 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent monooxygenase [Pseudoroseicyclus tamaricis].
ACCESSION   WP_235937836
VERSION     WP_235937836.1
KEYWORDS    RefSeq.
SOURCE      Pseudoroseicyclus tamaricis
  ORGANISM  Pseudoroseicyclus tamaricis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Pseudoroseicyclus.
REFERENCE   1  (residues 1 to 378)
  AUTHORS   Schreuder,H.A., van der Laan,J.M., Swarte,M.B., Kalk,K.H., Hol,W.G.
            and Drenth,J.
  TITLE     Crystal structure of the reduced form of p-hydroxybenzoate
            hydroxylase refined at 2.3 A resolution
  JOURNAL   Proteins 14 (2), 178-190 (1992)
   PUBMED   1409567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01494.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Pseudoroseicyclus tamaricis"
                     /db_xref="taxon:2705421"
     Protein         1..378
                     /product="FAD-dependent monooxygenase"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /calculated_mol_wt=40327
     Region          4..376
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mkviiagagv ggltaalala ragaevevce qspalrdagg glqitpngar vlhalgleem
       61 ldeigirseg vlardglrgr tlfhmpiggd ipyrfvhrsr ltqglaeaae aagaeirfdr
      121 gvrhllpdgg velqsgatva adlavgaqgi hslarmelng etapvftrnv awravlpgps
      181 vprsqiwllp grhvvsyplg peltnlvavr eqaawvgegw hhrdapgalq gafadasddl
      241 qrifarveev hlwglfrhdv aqvwrrgrsv ilgdaahpml pflsqganma iedgwalade
      301 vgrgedieaa lvrfqarrqp raaavvaasr gqaglyhlrg lpragahial rasgsltprl
      361 mrrrvswiyd hdetaarg
//
LOCUS       WP_235937854             289 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6473 family protein [Pseudoroseicyclus tamaricis].
ACCESSION   WP_235937854
VERSION     WP_235937854.1
KEYWORDS    RefSeq.
SOURCE      Pseudoroseicyclus tamaricis
  ORGANISM  Pseudoroseicyclus tamaricis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Pseudoroseicyclus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040434.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20078.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Pseudoroseicyclus tamaricis"
                     /db_xref="taxon:2705421"
     Protein         1..289
                     /product="DUF6473 family protein"
                     /calculated_mol_wt=32199
     Region          9..286
                     /region_name="DUF6473"
                     /note="Domain of unknown function (DUF6473); pfam20078"
                     /db_xref="CDD:466282"
ORIGIN      
        1 mseelvgamr hdaleersln ytpcrygtsk iffrgpqrsl dgryvtfvgg tetygkfike
       61 pfaqlverqv gmptvnfgca nasigaflae ptvvdacrga hanvvqimga qnlsnrfysv
      121 hprrndrflk pstvleaiyp evdfadfcft rhmlialhel saerfeivrg elqqawvsrm
      181 ttflreigph tsllwfsdyp psdrhwserp eglqaeplfi trrmidslrp lvrsvivvqp
      241 segaraegtr gmyfapqdag aaqglpgpqa hreaadaise tlhalapae
//
LOCUS       WP_235937852             137 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Pseudoroseicyclus tamaricis].
ACCESSION   WP_235937852
VERSION     WP_235937852.1
KEYWORDS    RefSeq.
SOURCE      Pseudoroseicyclus tamaricis
  ORGANISM  Pseudoroseicyclus tamaricis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Pseudoroseicyclus.
REFERENCE   1  (residues 1 to 137)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 137)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Pseudoroseicyclus tamaricis"
                     /db_xref="taxon:2705421"
     Protein         1..137
                     /product="VOC family protein"
                     /calculated_mol_wt=14036
     Region          15..114
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mtapalrvgv grlllyvrdi aattdfyarl fgyeavtqar drivelrpag pglplllhpa
       61 akgqrsgqaq vklvfdvedv pgfvaaaaer gipfgtvhda ggylfanard pagnsvsvsg
      121 rahagqeagg aaaarkg
//
LOCUS       WP_235937891             166 aa            linear   BCT 02-MAR-2025
DEFINITION  flavin reductase [Endobacterium cereale].
ACCESSION   WP_235937891
VERSION     WP_235937891.1
KEYWORDS    RefSeq.
SOURCE      Endobacterium cereale
  ORGANISM  Endobacterium cereale
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Endobacterium.
REFERENCE   1  (residues 1 to 166)
  AUTHORS   Parry,R.J. and Li,W.
  TITLE     An NADPH:FAD oxidoreductase from the valanimycin producer,
            Streptomyces viridifaciens. Cloning, analysis, and overexpression
  JOURNAL   J Biol Chem 272 (37), 23303-23311 (1997)
   PUBMED   9287340
REFERENCE   2  (residues 1 to 166)
  AUTHORS   Blanc,V., Lagneaux,D., Didier,P., Gil,P., Lacroix,P. and Crouzet,J.
  TITLE     Cloning and analysis of structural genes from Streptomyces
            pristinaespiralis encoding enzymes involved in the conversion of
            pristinamycin IIB to pristinamycin IIA (PIIA): PIIA synthase and
            NADH:riboflavin 5'-phosphate oxidoreductase
  JOURNAL   J Bacteriol 177 (18), 5206-5214 (1995)
   PUBMED   7665509
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013756.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01613.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Endobacterium cereale"
                     /db_xref="taxon:2663029"
     Protein         1..166
                     /product="flavin reductase"
                     /GO_function="GO:0010181 - FMN binding [Evidence IEA]"
                     /calculated_mol_wt=17506
     Region          11..165
                     /region_name="Pyridoxine 5'-phosphate (PNP) oxidase-like
                     and flavin reductase-like proteins"
                     /note="The PNPOx-like superfamily is composed of
                     pyridoxine 5'-phosphate (PNP) oxidases and other flavin
                     mononucleotide (FMN) binding proteins, which catalyze
                     FMN-mediated redox reactions. Flavin reductases catalyze
                     the reduction of FMN or FAD using NAD(P)H as...; cl00381"
                     /db_xref="CDD:469750"
ORIGIN      
        1 mtpqedaeta rlafrdamsr laaavhvvtt dgpagragft asavtsvtdt pptllvclnr
       61 assvaglfek nnvlcvstlt asqenisraf ggstpqeerf atgewmvgdt gapvlknalv
      121 sfdcriesav asgthhvlfc qvlgmhtgsd dedalvyfrr ryhslg
//
LOCUS       WP_235938115             353 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase [Endobacterium cereale].
ACCESSION   WP_235938115
VERSION     WP_235938115.1
KEYWORDS    RefSeq.
SOURCE      Endobacterium cereale
  ORGANISM  Endobacterium cereale
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Endobacterium.
REFERENCE   1  (residues 1 to 353)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 353)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Endobacterium cereale"
                     /db_xref="taxon:2663029"
     Protein         1..353
                     /product="phosphotransferase"
                     /calculated_mol_wt=39002
     Region          20..>351
                     /region_name="PRK06148"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:180426"
ORIGIN      
        1 mtminnaaar vlgaeletga iavppdqaer ialdhygltg kvewlwgekd snyrltledg
       61 tgyllkilnp aedpnvtsmh skallhveam dpgipvqrii rtkegaadfr fvaddggerg
      121 vrmvtfvpgm aqrtashspl qrekigvllg rmqkalksfs heaashritw dmthamgmrd
      181 llpaftdare rarlekaind feaeivpvig alpaqvihnd fnmenilvdp drpddvtgii
      241 dfgdmvfapn lfdvgvaaay qigaeaepve amcdlirgyr sqctlsdaei dlvytaavmr
      301 lvmrlaipqw raklfpedae rftirsasvw eqlarldaip ksqaidrlra adr
//
LOCUS       WP_235938214             148 aa            linear   BCT 02-MAR-2025
DEFINITION  RT0821/Lpp0805 family surface protein [Endobacterium cereale].
ACCESSION   WP_235938214
VERSION     WP_235938214.1
KEYWORDS    RefSeq.
SOURCE      Endobacterium cereale
  ORGANISM  Endobacterium cereale
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Endobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028308.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16998.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Endobacterium cereale"
                     /db_xref="taxon:2663029"
     Protein         1..148
                     /product="RT0821/Lpp0805 family surface protein"
                     /calculated_mol_wt=15644
     Region          41..148
                     /region_name="17kDa_Anti_2"
                     /note="17 kDa outer membrane surface antigen; cl01877"
                     /db_xref="CDD:445590"
ORIGIN      
        1 maliaktesr tsqtrafaar gfaiaaviat lsgctssldl fggdkvdrms tgtiqakrnp
       61 ttmsdevtvq navssadltk vsmsplpwan tstgsagvvs siregrnqgh vcrdfittrh
      121 sfegiaqfng qtcmtnsgdw mltafdrq
//
LOCUS       WP_235938274             481 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5723 family protein [Chitinophaga solisilvae].
ACCESSION   WP_235938274
VERSION     WP_235938274.1
KEYWORDS    RefSeq.
SOURCE      Chitinophaga solisilvae
  ORGANISM  Chitinophaga solisilvae
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Chitinophaga.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040164.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18990.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Chitinophaga solisilvae"
                     /db_xref="taxon:1233460"
     Protein         1..481
                     /product="DUF5723 family protein"
                     /calculated_mol_wt=53261
     Region          45..432
                     /region_name="DUF5723"
                     /note="Family of unknown function (DUF5723); pfam18990"
                     /db_xref="CDD:465943"
ORIGIN      
        1 mivifnrill vafmavllvh tamaqsfpgi snstyagiyg vianpasaag yrykwdvnif
       61 gadvkagnty lsvpksvlfs mpdsfkrnrd yfldttsrrn hngwgsadiv mpsvlyaide
      121 kqavsfvwrv rgsanggrlp tplanffgvn fpnpqyrgkg ltiqqldgtm hiwnefglsy
      181 arvikegyts rwkggitvkl lsgiaagyad vnnasfvvnt srnaditsgt lhyayngdvd
      241 twekpytrnv plfknigvgf digviyeyra dnggwgkaes sdaddytfri gvslndigri
      301 kyskgkystd ldlrkedvnp reigyknken inqyaqrlsr yftpigsdsm ftmtlpatln
      361 lmgdynidsr ffisanavia lnggrsnitk tyaltqfllt pryeterfga ylpvvvnyng
      421 qadigagfrv gplvigsysi ftnlfrkhvd hadafvalrl nsgmigrgka rnrqlgcpvn
      481 e
//
LOCUS       WP_235938227             229 aa            linear   BCT 02-MAR-2025
DEFINITION  GyrI-like domain-containing protein [Chitinophaga solisilvae].
ACCESSION   WP_235938227
VERSION     WP_235938227.1
KEYWORDS    RefSeq.
SOURCE      Chitinophaga solisilvae
  ORGANISM  Chitinophaga solisilvae
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Chitinophaga.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Anantharaman,V. and Aravind,L.
  TITLE     The SHS2 module is a common structural theme in functionally
            diverse protein groups, like Rpb7p, FtsA, GyrI, and MTH1598/TM1083
            superfamilies
  JOURNAL   Proteins 56 (4), 795-807 (2004)
   PUBMED   15281131
REFERENCE   2  (residues 1 to 229)
  AUTHORS   Romanowski,M.J., Gibney,S.A. and Burley,S.K.
  TITLE     Crystal structure of the Escherichia coli SbmC protein that
            protects cells from the DNA replication inhibitor microcin B17
  JOURNAL   Proteins 47 (3), 403-407 (2002)
   PUBMED   11948793
REFERENCE   3  (residues 1 to 229)
  AUTHORS   Kwon,H.J., Bennik,M.H., Demple,B. and Ellenberger,T.
  TITLE     Crystal structure of the Escherichia coli Rob transcription factor
            in complex with DNA
  JOURNAL   Nat Struct Biol 7 (5), 424-430 (2000)
   PUBMED   10802742
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018184.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06445.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Chitinophaga solisilvae"
                     /db_xref="taxon:1233460"
     Protein         1..229
                     /product="GyrI-like domain-containing protein"
                     /calculated_mol_wt=26026
     Region          28..225
                     /region_name="MA1133"
                     /note="Cyclopropanoid cyclopropyl hydrolase, GyrI-like
                     domain [Defense mechanisms, Signal transduction
                     mechanisms]; COG4832"
                     /db_xref="CDD:443860"
ORIGIN      
        1 mkhnitlgwl lvlgflidhe itltdmtkld ltkafksyys atiepqvvei gkglfltiqg
       61 kgdpngeafa envaalygva ygikflckae trdftvskle gfwwvedttq dpltipreew
      121 ryelairmpd yvttqhftaa vstaekkkks tlfrqvdlkt ieegsslqll hvgpfstepa
      181 slkkmddfmh skgltwngrh heiylsdfrk teqeklktil rhpvkavsq
//
LOCUS       WP_235938287             869 aa            linear   BCT 02-MAR-2025
DEFINITION  family 20 glycosylhydrolase [Chitinophaga solisilvae].
ACCESSION   WP_235938287
VERSION     WP_235938287.1
KEYWORDS    RefSeq.
SOURCE      Chitinophaga solisilvae
  ORGANISM  Chitinophaga solisilvae
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Chitinophaga.
REFERENCE   1  (residues 1 to 869)
  AUTHORS   Tews,I., Perrakis,A., Oppenheim,A., Dauter,Z., Wilson,K.S. and
            Vorgias,C.E.
  TITLE     Bacterial chitobiase structure provides insight into catalytic
            mechanism and the basis of Tay-Sachs disease
  JOURNAL   Nat Struct Biol 3 (7), 638-648 (1996)
   PUBMED   8673609
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012931.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00728.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..869
                     /organism="Chitinophaga solisilvae"
                     /db_xref="taxon:1233460"
     Protein         1..869
                     /product="family 20 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=96222
     Region          34..180
                     /region_name="CHB_HEX"
                     /note="Putative carbohydrate binding domain; cl03918"
                     /db_xref="CDD:446232"
     Region          200..319
                     /region_name="Glyco_hydro_20b"
                     /note="Glycosyl hydrolase family 20, domain 2; pfam02838"
                     /db_xref="CDD:427013"
     Region          318..769
                     /region_name="GH20_hexosaminidase"
                     /note="Beta-N-acetylhexosaminidases of glycosyl hydrolase
                     family 20 (GH20) catalyze the removal of beta-1,4-linked
                     N-acetyl-D-hexosamine residues from the non-reducing ends
                     of N-acetyl-beta-D-hexosaminides including
                     N-acetylglucosides and N-acetylgalactosides; cl02948"
                     /db_xref="CDD:445966"
     Site            order(333,440,526..527,577,609,713,715)
                     /site_type="active"
                     /db_xref="CDD:119331"
     Region          773..852
                     /region_name="X25_BaPul_like"
                     /note="X25 domain of Bacillus acidopullulyticus
                     pullulanase and similar proteins; cl46869"
                     /db_xref="CDD:481209"
ORIGIN      
        1 mmrqkflgkl vatgllltga vqiqaqqpap fdasrlkssw evvenhhqgk akflsaftfv
       61 ntgnkpfpak gwalyfnfvr svtpgvlpgn vkvenvngdl ykfspadnft ginpgdsikl
      121 nvegdawavn ftdapagfyl vwdnqpekgf plkditvrps ttarqlmryp gdktavvtpt
      181 difkqnaavk dipaaqlplv fptpvsytat ggnlvldgvp avttdpglea tgeflkkelv
      241 tllgkrnatg nssiafknda slaanayklq vtpagitiaa gssegafygi qslkslitpa
      301 awsgvqksvs ipavqvtdyp rfnyrafmid varnyhnkrd llrildimal yklnvlhyhf
      361 sddegwrlei pslpelteig gkrghssnwr nmlppsygsg pdtanaagsg fltrsefidv
      421 lryaterhir vlpeietpgh araavksmet ryyrlkeqgk qkeaeeyllt dlqdksqyrs
      481 vqnwndnvmn valpstyrfl ekvveelqam yreagaplps ihmggdevpn gvfekspacl
      541 almqqdssvk dvndlwyyyy kkvnnilrtr glelagweea gmrkttidge aqsipnpdfv
      601 ndnfqlnvwn nvigggqedl syrlanagyk vilsgvsnfy fdmaamksfd epgfywggfv
      661 dvdkpfyfip fdyyknskvd grgnpvtpam fvgkdrltgf gqsnirgiqg llwsetvtss
      721 drmeymmlpk llglaerawa qdpawarekd takadamyaq awsvfsnvlg kremprldny
      781 nggynwript agtsiedgvv sanvqlpglv iryttngdep tikspvytsp vkaagkvvkl
      841 kvfntrgrss rtttvkvpqv etqlknnkl
//
LOCUS       WP_235938320             259 aa            linear   BCT 02-MAR-2025
DEFINITION  recombination protein NinB [Endobacterium cereale].
ACCESSION   WP_235938320
VERSION     WP_235938320.1
KEYWORDS    RefSeq.
SOURCE      Endobacterium cereale
  ORGANISM  Endobacterium cereale
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Endobacterium.
REFERENCE   1  (residues 1 to 259)
  AUTHORS   Maxwell,K.L., Reed,P., Zhang,R.G., Beasley,S., Walmsley,A.R.,
            Curtis,F.A., Joachimiak,A., Edwards,A.M. and Sharples,G.J.
  TITLE     Functional similarities between phage lambda Orf and Escherichia
            coli RecFOR in initiation of genetic exchange
  JOURNAL   Proc Natl Acad Sci U S A 102 (32), 11260-11265 (2005)
   PUBMED   16076958
REFERENCE   2  (residues 1 to 259)
  AUTHORS   Tarkowski,T.A., Mooney,D., Thomason,L.C. and Stahl,F.W.
  TITLE     Gene products encoded in the ninR region of phage lambda
            participate in Red-mediated recombination
  JOURNAL   Genes Cells 7 (4), 351-363 (2002)
   PUBMED   11952832
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017578.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05772.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Endobacterium cereale"
                     /db_xref="taxon:2663029"
     Protein         1..259
                     /product="recombination protein NinB"
                     /calculated_mol_wt=28300
     Region          6..118
                     /region_name="NinB"
                     /note="NinB protein; cl21658"
                     /db_xref="CDD:451348"
ORIGIN      
        1 mmnrqtvtin gpedrqriat warnvdegti vefrkktrsh eqsakmhaml gevanqvvwy
       61 gtklkvedwk nmftaslrka qvvpgidpgt vvplgihtst mtvdemsnmi eaiyafgadp
      121 ehpvtfkepq pdtnsgspsp eaddapitss akpevspasg spisplnkae lieccrklme
      181 ipaikelepq akrsvleaak dgwketlhpd lhdhlksffv sadaqikadp kvypslrasa
      241 fqhfaevldc kaadiggea
//
LOCUS       WP_235938402              48 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5522 domain-containing protein [Chitinophaga solisilvae].
ACCESSION   WP_235938402
VERSION     WP_235938402.1
KEYWORDS    RefSeq.
SOURCE      Chitinophaga solisilvae
  ORGANISM  Chitinophaga solisilvae
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Chitinophaga.
REFERENCE   1  (residues 1 to 48)
  AUTHORS   Ito,T., Matsubara,D., Tanaka,I., Makiya,K., Tanei,Z.I., Kumagai,Y.,
            Shiu,S.J., Nakaoka,H.J., Ishikawa,S., Isagawa,T., Morikawa,T.,
            Shinozaki-Ushiku,A., Goto,Y., Nakano,T., Tsuchiya,T., Tsubochi,H.,
            Komura,D., Aburatani,H., Dobashi,Y., Nakajima,J., Endo,S.,
            Fukayama,M., Sekido,Y., Niki,T. and Murakami,Y.
  TITLE     Loss of YAP1 defines neuroendocrine differentiation of lung tumors
  JOURNAL   Cancer Sci 107 (10), 1527-1538 (2016)
   PUBMED   27418196
REFERENCE   2  (residues 1 to 48)
  AUTHORS   Schmidt,J., Braggio,E., Kortuem,K.M., Egan,J.B., Zhu,Y.X.,
            Xin,C.S., Tiedemann,R.E., Palmer,S.E., Garbitt,V.M., McCauley,D.,
            Kauffman,M., Shacham,S., Chesi,M., Bergsagel,P.L. and Stewart,A.K.
  TITLE     Genome-wide studies in multiple myeloma identify XPO1/CRM1 as a
            critical target validated using the selective nuclear export
            inhibitor KPT-276
  JOURNAL   Leukemia 27 (12), 2357-2365 (2013)
   PUBMED   23752175
REFERENCE   3  (residues 1 to 48)
  AUTHORS   Chan,C.X., Reyes-Prieto,A. and Bhattacharya,D.
  TITLE     Red and green algal origin of diatom membrane transporters:
            insights into environmental adaptation and cell evolution
  JOURNAL   PLoS One 6 (12), e29138 (2011)
   PUBMED   22195008
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037605.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17653.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..48
                     /organism="Chitinophaga solisilvae"
                     /db_xref="taxon:1233460"
     Protein         1..48
                     /product="DUF5522 domain-containing protein"
                     /calculated_mol_wt=5560
     Region          <1..28
                     /region_name="DUF5522"
                     /note="Family of unknown function (DUF5522); pfam17653"
                     /db_xref="CDD:435947"
ORIGIN      
        1 mvftekyhrd rgyccgngck hcpfsyenvp epkksillkk rneandrq
//
LOCUS       WP_235938587             255 aa            linear   BCT 02-MAR-2025
DEFINITION  M57 family metalloprotease [Chitinophaga solisilvae].
ACCESSION   WP_235938587
VERSION     WP_235938587.1
KEYWORDS    RefSeq.
SOURCE      Chitinophaga solisilvae
  ORGANISM  Chitinophaga solisilvae
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Chitinophaga.
REFERENCE   1  (residues 1 to 255)
  AUTHORS   Quillet,L., Bensmail,L., Barray,S. and Guespin-Michel,J.
  TITLE     Cloning and sequencing of two genes, prtA and prtB, from Myxococcus
            xanthus, encoding PrtA and PrtB proteases, both of which are
            required for the protease activity
  JOURNAL   Gene 198 (1-2), 135-140 (1997)
   PUBMED   9370274
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023805.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12388.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Chitinophaga solisilvae"
                     /db_xref="taxon:1233460"
     Protein         1..255
                     /product="M57 family metalloprotease"
                     /calculated_mol_wt=28230
     Region          108..232
                     /region_name="ZnMc"
                     /note="Zinc-dependent metalloprotease. This super-family
                     of metalloproteases contains two major branches, the
                     astacin-like proteases and the adamalysin/reprolysin-like
                     proteases. Both branches have wide phylogenetic
                     distribution, and contain sub-families, which...; cl00064"
                     /db_xref="CDD:469599"
     Site            order(200..201,204,210)
                     /site_type="active"
                     /db_xref="CDD:239796"
ORIGIN      
        1 mkhsngffis avicmtsltl lfsscsknek elqvpspapn aeemtnylvn qgfdrehivf
       61 dkdrvviesd iimslsdlkq rtaewkakpe tehrrgtyiv sntyntnikf yldpaipqvw
      121 rtaiqgavnn wnavngtrlg msivstqaga ntrvfmgyen anwiaraylp gsdsrpgvtv
      181 einskynsms asqqlfaith efghtigfhh tnqatgvfin gtptsdpnsv mnstvlpwng
      241 ftagdvratq ilypq
//
LOCUS       WP_235938708             609 aa            linear   BCT 02-MAR-2025
DEFINITION  winged helix-turn-helix domain-containing protein [Thalassotalea
            algicola].
ACCESSION   WP_235938708
VERSION     WP_235938708.1
KEYWORDS    RefSeq.
SOURCE      Thalassotalea algicola
  ORGANISM  Thalassotalea algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Colwelliaceae; Thalassotalea.
REFERENCE   1  (residues 1 to 609)
  AUTHORS   Wietzorrek,A. and Bibb,M.
  TITLE     A novel family of proteins that regulates antibiotic production in
            streptomycetes appears to contain an OmpR-like DNA-binding fold
  JOURNAL   Mol Microbiol 25 (6), 1181-1184 (1997)
   PUBMED   9350875
REFERENCE   2  (residues 1 to 609)
  AUTHORS   Martinez-Hackert,E. and Stock,A.M.
  TITLE     The DNA-binding domain of OmpR: crystal structures of a winged
            helix transcription factor
  JOURNAL   Structure 5 (1), 109-124 (1997)
   PUBMED   9016718
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012698.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00486.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Thalassotalea algicola"
                     /db_xref="taxon:2716224"
     Protein         1..609
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=70296
     Region          4..>335
                     /region_name="PRK12370"
                     /note="HilA/EilA family virulence transcriptional
                     regulator"
                     /db_xref="CDD:237080"
     Region          10..100
                     /region_name="CadC1"
                     /note="DNA-binding winged helix-turn-helix (wHTH) domain
                     [Transcription]; COG3710"
                     /db_xref="CDD:442924"
ORIGIN      
        1 miindnnhsm ryyfeqfefd ansltlkhnq qtiairhnea lllklllenn qsvvskdtil
       61 sevwqgkvvs eqavfqnish lrslfggnai ktfakrgyqw qltfqcqnae spiqpvnvps
      121 taqqtraqnk thwrliafia vlligfvsyf ssvfsvnkes kpqvaivpft ftnmaeqevp
      181 ihqltfkvne lknisaqqye atqilsyqsl kqshplilsg sfwrsekqvh ldfllkglsg
      241 dwqgqmsgtt ieqltknlaa hlqqpfilem vtkplspevk qarlsiahqe spkdllvlnr
      301 lvdtyitmeq ydtamtladk leqlaieenn pqqlgnallf qssiltnkei felsnhklmn
      361 aqkafeaikd drrladtyna rswldhqnsd ynaikkhlll sakhalavnd ierelhalty
      421 lsvlahkhkr hddkylylqq aeskmdgykl pqyhyakipf hhaiysnspa qrephlkqvl
      481 tytehtpnhw vaqssrrqll dyyissgrln laselvnpld tttpentllk arlakelkqq
      541 eqyqtygkqa feqaqlagkr slsldiallm cdepdkqiny dfyfryieeh ateywsrrnq
      601 qklhainiq
//
LOCUS       WP_235938716             217 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Thalassotalea algicola].
ACCESSION   WP_235938716
VERSION     WP_235938716.1
KEYWORDS    RefSeq.
SOURCE      Thalassotalea algicola
  ORGANISM  Thalassotalea algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Colwelliaceae; Thalassotalea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Thalassotalea algicola"
                     /db_xref="taxon:2716224"
     Protein         1..217
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=24318
     Region          14..202
                     /region_name="NUDIX_ADPRase"
                     /note="Adp Ribose Pyrophosphatase; cd24155"
                     /db_xref="CDD:467603"
ORIGIN      
        1 mkvksqfhhm seldvrildk kcrfqgffti eeyqvshklf nggmskvlnr eifergdava
       61 vipydpvrns livveqfrvg airtqtnpwl iefiagmfsd nespvdvavr eakeeanivl
      121 epdkmrhimt ylsspggtse qlhlyaapvd arnvggvfgl eeegedikvh eiglndalal
      181 indgtinnam tiigiqwlal nysqlqshwa dndktks
//
LOCUS       WP_235938738              73 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Schauerella aestuarii].
ACCESSION   WP_235938738
VERSION     WP_235938738.1
KEYWORDS    RefSeq.
SOURCE      Schauerella aestuarii
  ORGANISM  Schauerella aestuarii
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Schauerella.
REFERENCE   1  (residues 1 to 73)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Schauerella aestuarii"
                     /db_xref="taxon:2511204"
     Protein         1..>73
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>73
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 makgkfertk phvnvgtigh vdhgkttlta aittvlsakf ggeargydqi daapeekarg
       61 itintahvey ete
//
LOCUS       WP_235938763             543 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Schauerella aestuarii].
ACCESSION   WP_235938763
VERSION     WP_235938763.1
KEYWORDS    RefSeq.
SOURCE      Schauerella aestuarii
  ORGANISM  Schauerella aestuarii
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Schauerella.
REFERENCE   1  (residues 1 to 543)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Schauerella aestuarii"
                     /db_xref="taxon:2511204"
     Protein         1..543
                     /product="AMP-binding protein"
                     /calculated_mol_wt=58569
     Region          6..541
                     /region_name="PRK06164"
                     /note="acyl-CoA synthetase; Validated"
                     /db_xref="CDD:235722"
ORIGIN      
        1 mndvyaddmp vsaatmpall ahhvhthgda iafiegerai syrefdrqva staawlvqhg
       61 vqpgdrvavw lvnrmewlam yfglarigaa mmtlntryrs heladildrs qasmlvlqlg
      121 frkidfpavl rdvpphaara lrsvavvdan ehhmpphvlg rptvaftlad lpdadtpdvs
      181 rpdatsilft tsgttsapkl vmhpqrtvtl halrtarayg vladdarlla alpfsgvfgf
      241 nslmcafaag rpvivmdtfd gaeaaaliqr hcithvfgsd emfqrvieha tspdvlasar
      301 mlgfgnfqsh gmddaqaawq rgipmfglyg ssevqalfsv qrmeepvper vkgggmpasr
      361 nhgahirird ldsgallgpg asgaleirad tnfigylndp eatakaidad gyfrtgdiay
      421 lrddgsfvyv arqgdamrls gylvspaeie nvirqtpgvq evqvvaveig kqlrpvafvi
      481 aatgstlset elkaaaqtvl aafkvpahfw iedafpttqs angnkiqrak lralaqqrva
      541 agg
//
LOCUS       WP_235938793             256 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Thalassotalea algicola].
ACCESSION   WP_235938793
VERSION     WP_235938793.1
KEYWORDS    RefSeq.
SOURCE      Thalassotalea algicola
  ORGANISM  Thalassotalea algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Colwelliaceae; Thalassotalea.
REFERENCE   1  (residues 1 to 256)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Thalassotalea algicola"
                     /db_xref="taxon:2716224"
     Protein         1..256
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=28028
     Region          40..146
                     /region_name="EstA"
                     /note="Triacylglycerol esterase/lipase EstA, alpha/beta
                     hydrolase fold [Lipid transport and metabolism]; COG1075"
                     /db_xref="CDD:440693"
     Region          <106..249
                     /region_name="COG4814"
                     /note="Uncharacterized conserved protein with an
                     alpha/beta hydrolase fold [Function unknown]"
                     /db_xref="CDD:443842"
ORIGIN      
        1 mtaknvivqv vsttisikiv lltlllvtgc ansgvksspy qkdkelvvla hglgrsdwam
       61 wrleqrlega nyrvctldya tigesidrvl tetskqidac lqnaskahfv ghslgglvir
      121 aylqqnkdil tkqnvgeivl mgtpnkgsel adylsdswlm kiggeissal vtgenslghn
      181 leeldvnlgi iagtkpsnlt reyfigpndg lvsvestklk smsdfikiev thtqmrynle
      241 vaeqtihflk hgefkh
//
LOCUS       WP_235938874             407 aa            linear   BCT 02-MAR-2025
DEFINITION  3-deoxy-D-manno-octulosonic acid transferase [Thalassotalea
            algicola].
ACCESSION   WP_235938874
VERSION     WP_235938874.1
KEYWORDS    RefSeq.
SOURCE      Thalassotalea algicola
  ORGANISM  Thalassotalea algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Colwelliaceae; Thalassotalea.
REFERENCE   1  (residues 1 to 407)
  AUTHORS   Chung,H.S. and Raetz,C.R.
  TITLE     Interchangeable domains in the Kdo transferases of Escherichia coli
            and Haemophilus influenzae
  JOURNAL   Biochemistry 49 (19), 4126-4137 (2010)
   PUBMED   20394418
REFERENCE   2  (residues 1 to 407)
  AUTHORS   Lobau,S., Mamat,U., Brabetz,W. and Brade,H.
  TITLE     Molecular cloning, sequence analysis, and functional
            characterization of the lipopolysaccharide biosynthetic gene kdtA
            encoding 3-deoxy-alpha-D-manno-octulosonic acid transferase of
            Chlamydia pneumoniae strain TW-183
  JOURNAL   Mol Microbiol 18 (3), 391-399 (1995)
   PUBMED   8748024
REFERENCE   3  (residues 1 to 407)
  AUTHORS   Belunis,C.J. and Raetz,C.R.
  TITLE     Biosynthesis of endotoxins. Purification and catalytic properties
            of 3-deoxy-D-manno-octulosonic acid transferase from Escherichia
            coli
  JOURNAL   J Biol Chem 267 (14), 9988-9997 (1992)
   PUBMED   1577828
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11445568
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Thalassotalea algicola"
                     /db_xref="taxon:2716224"
     Protein         1..407
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /EC_number="2.4.99.-"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=45333
     Region          2..407
                     /region_name="KdtA"
                     /note="3-deoxy-D-manno-octulosonic-acid transferase [Cell
                     wall/membrane/envelope biogenesis]; COG1519"
                     /db_xref="CDD:441128"
ORIGIN      
        1 mrsinhpayr krlgerlgfi prhfkpkgiv ihaasvgevl alkpfieqcl vdfaqysitv
       61 ttftptgsaq vqklfgdkvq hcyipldiwp csylflrrlq pkalvmmete lwpnlidqat
      121 raqtklllvn grisnkslpr yqklsalisp clkqfdqvla qsednaerlv klgasptscs
      181 sagnlkydlt lgrdikskqk hlaellpnnr piwllasshs gdeelilssy qtiksklpnc
      241 lliivprhpe rfdnvakiis qhqfscqrrs tnekvseetq vwlmdslgel mavlgltdvv
      301 tmggtfsnig ghnplepalf kkpvivgndm snftevyqql ksiggivtlp kysdsnslkq
      361 alaekvttli qnpesaqtlg enaykvvlqn qgatqrcinv ltqllnr
//
LOCUS       WP_235938892             334 aa            linear   BCT 02-MAR-2025
DEFINITION  FecR domain-containing protein [Schauerella aestuarii].
ACCESSION   WP_235938892
VERSION     WP_235938892.1
KEYWORDS    RefSeq.
SOURCE      Schauerella aestuarii
  ORGANISM  Schauerella aestuarii
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Schauerella.
REFERENCE   1  (residues 1 to 334)
  AUTHORS   Van Hove,B., Staudenmaier,H. and Braun,V.
  TITLE     Novel two-component transmembrane transcription control: regulation
            of iron dicitrate transport in Escherichia coli K-12
  JOURNAL   J Bacteriol 172 (12), 6749-6758 (1990)
   PUBMED   2254251
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04773.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Schauerella aestuarii"
                     /db_xref="taxon:2511204"
     Protein         1..334
                     /product="FecR domain-containing protein"
                     /calculated_mol_wt=36716
     Region          13..331
                     /region_name="PRK09774"
                     /note="fec operon regulator FecR; Reviewed"
                     /db_xref="CDD:236622"
ORIGIN      
        1 msatnlssts ehplnhtgdd aleqaadwfa llrsgeasaa draawqawcn aseanrsawa
       61 qvenigrrfq piqttpnprd tmgayrlatv narrrrlvlg lltiagtgsl gilawrhspa
      121 piwlaaktad hrtamgevrq itlsdgstvw lgtasafded fstglrrlyl ragemliata
      181 adssrpfvvd tphgrlralg trftvrldna dtrlavydga vqaraaegai diiragqevr
      241 mskrgltdfk ptdparesst rglfiaqhvp lhavmheler yrmghislsp dvanlavfgs
      301 ypmtdpdrtl amlesvmpir vrrplpwwir iear
//
LOCUS       WP_235939108             427 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Schauerella aestuarii].
ACCESSION   WP_235939108
VERSION     WP_235939108.1
KEYWORDS    RefSeq.
SOURCE      Schauerella aestuarii
  ORGANISM  Schauerella aestuarii
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Schauerella.
REFERENCE   1  (residues 1 to 427)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 427)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 427)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 427)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Schauerella aestuarii"
                     /db_xref="taxon:2511204"
     Protein         1..427
                     /product="ATP-binding protein"
                     /calculated_mol_wt=46454
     Region          <153..423
                     /region_name="envZ"
                     /note="osmolarity sensor protein; Provisional; PRK09467"
                     /db_xref="CDD:236531"
ORIGIN      
        1 mmtrlfliff vglvlahams fallfyeryd atkslmvgdl erelsiaait ldrlspaerp
       61 ewlmrlssgn rqyrlgpgea dqplrlaaar tavesirsal sssypvvfha madddsfiqa
      121 ritlsdgssv vrdihaampp maawlpvvla gqlallvaca wlavrlavrp ltrlaqaaer
      181 ldvdqvsprl nehgpievar aavafnamqd rigsylkerm qllgaishdl qtpitrmklr
      241 aefmddsvdk tkltldlaev erlvregidy arsahgteek cvridahafl dsivcdyqdt
      301 gqqvslsgeh vailktrpha lrrvlcnlid nalkfagaae vcvqdtgpqg vsilvldrgp
      361 giaaaeldav fqpfyrlevs rnrntggtgl glaiarqlav vlggslvlhn rhggglaaev
      421 ripanpq
//
LOCUS       WP_235939169             328 aa            linear   BCT 02-MAR-2025
DEFINITION  type II secretion system F family protein [Schauerella aestuarii].
ACCESSION   WP_235939169
VERSION     WP_235939169.1
KEYWORDS    RefSeq.
SOURCE      Schauerella aestuarii
  ORGANISM  Schauerella aestuarii
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Schauerella.
REFERENCE   1  (residues 1 to 328)
  AUTHORS   Peabody,C.R., Chung,Y.J., Yen,M.R., Vidal-Ingigliardi,D.,
            Pugsley,A.P. and Saier,M.H.
  TITLE     Type II protein secretion and its relationship to bacterial type IV
            pili and archaeal flagella
  JOURNAL   Microbiology (Reading) 149 (Pt 11), 3051-3072 (2003)
   PUBMED   14600218
REFERENCE   2  (residues 1 to 328)
  AUTHORS   Py,B., Loiseau,L. and Barras,F.
  TITLE     An inner membrane platform in the type II secretion machinery of
            Gram-negative bacteria
  JOURNAL   EMBO Rep 2 (3), 244-248 (2001)
   PUBMED   11266368
REFERENCE   3  (residues 1 to 328)
  AUTHORS   Stathopoulos,C., Hendrixson,D.R., Thanassi,D.G., Hultgren,S.J., St
            Geme,J.W. 3rd and Curtiss,R. 3rd.
  TITLE     Secretion of virulence determinants by the general secretory
            pathway in gram-negative pathogens: an evolving story
  JOURNAL   Microbes Infect 2 (9), 1061-1072 (2000)
   PUBMED   10967286
REFERENCE   4  (residues 1 to 328)
  AUTHORS   Salmond,G.P. and Reeves,P.J.
  TITLE     Membrane traffic wardens and protein secretion in gram-negative
            bacteria
  JOURNAL   Trends Biochem Sci 18 (1), 7-12 (1993)
   PUBMED   8438237
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11449670
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Schauerella aestuarii"
                     /db_xref="taxon:2511204"
     Protein         1..328
                     /product="type II secretion system F family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /calculated_mol_wt=36027
     Region          135..318
                     /region_name="TadC"
                     /note="Flp pilus assembly protein TadC [Extracellular
                     structures]; COG2064"
                     /db_xref="CDD:441667"
ORIGIN      
        1 mtgsnllfvv alllmalaai tlaagiwirq arqgrnrrvv dralaaresr radavdavpd
       61 gdgrmaaair aaerlgarle rgrwsdalla gedrelidmc gfadmarara wfivarvaai
      121 vvlcvvamve rhtwlsvlpp glrsltalff gfalgymlpk wtisrrakrr rlaadeelpl
      181 lidllrllqg vglsidqslq vittefahvl pvltselria vdlhsrgrtr eqslqrlats
      241 fenddlqaic rlivqvdrhg gavqeplqrf aervrdkrrm glkekigrlt vkmtgvmvvt
      301 llpalmivtg gagliavlrg msrvsggf
//
LOCUS       WP_235939184             963 aa            linear   BCT 02-MAR-2025
DEFINITION  mechanosensitive ion channel domain-containing protein [Schauerella
            aestuarii].
ACCESSION   WP_235939184
VERSION     WP_235939184.1
KEYWORDS    RefSeq.
SOURCE      Schauerella aestuarii
  ORGANISM  Schauerella aestuarii
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Schauerella.
REFERENCE   1  (residues 1 to 963)
  AUTHORS   Flegler,V.J., Rasmussen,A., Borbil,K., Boten,L., Chen,H.A.,
            Deinlein,H., Halang,J., Hellmanzik,K., Loffler,J., Schmidt,V.,
            Makbul,C., Kraft,C., Hedrich,R., Rasmussen,T. and Bottcher,B.
  TITLE     Mechanosensitive channel gating by delipidation
  JOURNAL   Proc Natl Acad Sci U S A 118 (33) (2021)
   PUBMED   34376558
REFERENCE   2  (residues 1 to 963)
  AUTHORS   Lai,J.Y., Poon,Y.S., Kaiser,J.T. and Rees,D.C.
  TITLE     Open and shut: crystal structures of the dodecylmaltoside
            solubilized mechanosensitive channel of small conductance from
            Escherichia coli and Helicobacter pylori at 4.4 A and 4.1 A
            resolutions
  JOURNAL   Protein Sci 22 (4), 502-509 (2013)
   PUBMED   23339071
REFERENCE   3  (residues 1 to 963)
  AUTHORS   Zhang,X., Wang,J., Feng,Y., Ge,J., Li,W., Sun,W., Iscla,I., Yu,J.,
            Blount,P., Li,Y. and Yang,M.
  TITLE     Structure and molecular mechanism of an anion-selective
            mechanosensitive channel of small conductance
  JOURNAL   Proc Natl Acad Sci U S A 109 (44), 18180-18185 (2012)
   PUBMED   23074248
REFERENCE   4  (residues 1 to 963)
  AUTHORS   Pliotas,C., Ward,R., Branigan,E., Rasmussen,A., Hagelueken,G.,
            Huang,H., Black,S.S., Booth,I.R., Schiemann,O. and Naismith,J.H.
  TITLE     Conformational state of the MscS mechanosensitive channel in
            solution revealed by pulsed electron-electron double resonance
            (PELDOR) spectroscopy
  JOURNAL   Proc Natl Acad Sci U S A 109 (40), E2675-E2682 (2012)
   PUBMED   23012406
REFERENCE   5  (residues 1 to 963)
  AUTHORS   Kloda,A. and Martinac,B.
  TITLE     Structural and functional differences between two homologous
            mechanosensitive channels of Methanococcus jannaschii
  JOURNAL   EMBO J 20 (8), 1888-1896 (2001)
   PUBMED   11296222
REFERENCE   6  (residues 1 to 963)
  AUTHORS   Kloda,A. and Martinac,B.
  TITLE     Molecular identification of a mechanosensitive channel in archaea
  JOURNAL   Biophys J 80 (1), 229-240 (2001)
   PUBMED   11159397
REFERENCE   7  (residues 1 to 963)
  AUTHORS   Martinac,B.
  TITLE     Mechanosensitive channels in prokaryotes
  JOURNAL   Cell Physiol Biochem 11 (2), 61-76 (2001)
   PUBMED   11275684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013117.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00924.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Schauerella aestuarii"
                     /db_xref="taxon:2511204"
     Protein         1..963
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=101476
     Region          50..855
                     /region_name="PRK11281"
                     /note="mechanosensitive channel MscK; cl46976"
                     /db_xref="CDD:481316"
ORIGIN      
        1 mreianttph lprsripvwa pflfivllis svclwapraw aqadsaapsa gsppsaqgnp
       61 apgtatasdp ahvaatassg aglasygala dalenessrr qlieqlrtla agqpaatapa
      121 sgsaapapaa gaappaagss qgspaapakg asatdksiaa asnaqltlpe eqgdaslgrr
      181 iadgtqafva gialdvseai dtfkslgsgg gargvtwaqw tqaltsfaiv llatviafav
      241 lralarlifa rldvwvarge daapaaaqig plpdgdvvas pqvddalagp vspahadtva
      301 aaaaprsssc hrvfhargwy rsaiamgaaf lvdlavvlla clvgygvglf gtgrqgsigt
      361 ldlffinafm aveitkvlir vvfatryghl rllpmaddva tywnrwlavv vsltgygmli
      421 vvplvkamfs aavgqmlgll imlgvyiyav rviwsnrali rhrlearadr astaffgtli
      481 rmlarvwhla aiayftvllv vsqiapqdal pfmaratvqt liaiaigmll ssilslalsr
      541 plrlsddmra rlpmlearln ayvpatlkgi rmliliavvl vvfdawqafn lavwiasesg
      601 ratvstvihv aiillvaala wtviasiieh rlsvssgkga psarektlls lfrnaalivi
      661 vtmtilills qigidiapli agagvvglai gfgaqklvqd iitgvfiqle ngmnqndvve
      721 aagvfgtvek ltirsvgirt ldggyhlipf ssvttvanhm rdfsyhlgey tvayresvdd
      781 amyhleqafe elkldpvlap eiledmtipg vtalnergft irvlikttpg mqwavqrgyn
      841 rlvkkhfnaa nielpyphtv vyfgqdkrga apganvnlaq tageegtdra lppgnalgrp
      901 vrvqvaenap apghtprplt rvpassaedv lgneldtvvd edgepredve kreptrhndg
      961 rqs
//
LOCUS       WP_235939266             372 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Bradyrhizobium hipponense].
ACCESSION   WP_235939266
VERSION     WP_235939266.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium hipponense
  ORGANISM  Bradyrhizobium hipponense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 372)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 372)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Bradyrhizobium hipponense"
                     /db_xref="taxon:2605638"
     Protein         1..372
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=41302
     Region          191..365
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(209,223..224,300,302,318,353)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:271188"
     Site            order(223,318,321,344,353)
                     /site_type="active"
                     /db_xref="CDD:271188"
ORIGIN      
        1 msgydaaarh laqwltlaki avadiddgvt drfarhrcrc pgirrekgvs ekyvrrvrrf
       61 veflgecgiv qrkpklaspt ldrrvvefqd wlrqhrgvte ltidrhgrmv mrllpalgir
      121 prswnaqlir nviiaetkrv slayvktmtm alrgflrfls arglcragld qavpiipqwr
      181 lsslpryigs sdvevliatc dqttatgmrd raillllarl glragdilsl rltdidwqqa
      241 tlsvrgkgrr etrlplpqda gdavlayldq arphvvdgri ffmsnapirp ltrssavsdv
      301 vrcairkagi ttpsnganll rhsaatamlr ggatldtvga vlrhrspdmt ahyakvdvtm
      361 llqiaqpwpg da
//
LOCUS       WP_235939271             168 aa            linear   BCT 02-MAR-2025
DEFINITION  cyclic nucleotide-binding domain-containing protein [Bradyrhizobium
            hipponense].
ACCESSION   WP_235939271
VERSION     WP_235939271.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium hipponense
  ORGANISM  Bradyrhizobium hipponense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 168)
  AUTHORS   Yau,K.W.
  TITLE     Cyclic nucleotide-gated channels: an expanding new family of ion
            channels
  JOURNAL   Proc Natl Acad Sci U S A 91 (9), 3481-3483 (1994)
   PUBMED   7513422
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012257.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00027.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Bradyrhizobium hipponense"
                     /db_xref="taxon:2605638"
     Protein         1..168
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /calculated_mol_wt=18328
     Region          <3..162
                     /region_name="cyc_nuc_ocin"
                     /note="bacteriocin-type transport-associated protein;
                     TIGR03896"
                     /db_xref="CDD:274839"
ORIGIN      
        1 mtdgdiewma kngtcrrlsd gevlieeggr sdslillleg elqvsargyg dvarmgvgei
       61 vgevslvdsa ppsatittrg eglalfldkr qlleklehde sfgsrfyral avfladrlra
      121 trqpatdrll dgtalsrdel digimdhvta agerfsrllr mlhchsvn
//
LOCUS       WP_235939324             222 aa            linear   BCT 02-MAR-2025
DEFINITION  SOS response-associated peptidase family protein [Bradyrhizobium
            hipponense].
ACCESSION   WP_235939324
VERSION     WP_235939324.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium hipponense
  ORGANISM  Bradyrhizobium hipponense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 222)
  AUTHORS   Aravind,L., Anand,S. and Iyer,L.M.
  TITLE     Novel autoproteolytic and DNA-damage sensing components in the
            bacterial SOS response and oxidized methylcytosine-induced
            eukaryotic DNA demethylation systems
  JOURNAL   Biol Direct 8, 20 (2013)
   PUBMED   23945014
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014626.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02586.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Bradyrhizobium hipponense"
                     /db_xref="taxon:2605638"
     Protein         1..222
                     /product="SOS response-associated peptidase family
                     protein"
                     /GO_function="GO:0003697 - single-stranded DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006974 - DNA damage response [Evidence
                     IEA]"
                     /calculated_mol_wt=24558
     Region          5..213
                     /region_name="SRAP"
                     /note="SOS response associated peptidase (SRAP); cl03646"
                     /db_xref="CDD:470848"
ORIGIN      
        1 mvnryvgnla pmsgvfpdyt apivrvgaeg relatarwgm pssqqalmea tkkrakklea
       61 kgkpvefkel lrmepdggtt nirnvksqhw trwlgvenrc ivpfnsfsef nkdeggdiwf
      121 aldeerplac fagiwtnwts vrkvkegetn ndlyafltte anaevgaihp kampvilttp
      181 eqveiwmtas pdealklqrp lpdgslriva rgvkedpaga tt
//
LOCUS       WP_235939373             459 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Occultella kanbiaonis].
ACCESSION   WP_235939373
VERSION     WP_235939373.1
KEYWORDS    RefSeq.
SOURCE      Occultella kanbiaonis
  ORGANISM  Occultella kanbiaonis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ruaniaceae; Occultella.
REFERENCE   1  (residues 1 to 459)
  AUTHORS   Mande,S.S., Sarfaty,S., Allen,M.D., Perham,R.N. and Hol,W.G.
  TITLE     Protein-protein interactions in the pyruvate dehydrogenase
            multienzyme complex: dihydrolipoamide dehydrogenase complexed with
            the binding domain of dihydrolipoamide acetyltransferase
  JOURNAL   Structure 4 (3), 277-286 (1996)
   PUBMED   8805537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07992.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Occultella kanbiaonis"
                     /db_xref="taxon:2675754"
     Protein         1..459
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=50007
     Region          2..455
                     /region_name="PLN02852"
                     /note="ferredoxin-NADP+ reductase; cl30539"
                     /db_xref="CDD:357415"
ORIGIN      
        1 mpsntrlrva ivgagpagiy aadilsktdl dvdidlferl papfglvryg vapdhprika
       61 iivalykvlq rgdirlignv dfgadvdlae lreyydaiif stgaikdadl pipgveldgs
      121 ygaadfvswy dghpdvprtw pleaqkvavl gvgnvaldva rilakhvedl mptevpdnvv
      181 eglrtspvtd vhvfgrrgpa qvkftplelr elghvpdvdi vvypedfdfd dgseeairss
      241 nqtkqvvktl tdwtlreese ltasrrihlh flhrpaeilg adgkvtgirt erteltgdgs
      301 vrgtgefaef dvqavyravg yfgsplaglp fdeaagvipn dggrvldnhg rhipgtyatg
      361 wikrgpvgli ghtksdanet irhlvddvag gavpsapkrd praildrlea dgvpfttwqg
      421 welldayers lgeeqgreri kvvprehmte isrqahapa
//
LOCUS       WP_235939408            1140 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein [Occultella kanbiaonis].
ACCESSION   WP_235939408
VERSION     WP_235939408.1
KEYWORDS    RefSeq.
SOURCE      Occultella kanbiaonis
  ORGANISM  Occultella kanbiaonis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ruaniaceae; Occultella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1140
                     /organism="Occultella kanbiaonis"
                     /db_xref="taxon:2675754"
     Protein         1..1140
                     /product="helicase-related protein"
                     /calculated_mol_wt=127085
     Region          2..626
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          1016..1102
                     /region_name="NOV_C"
                     /note="Protein NO VEIN, C-terminal; pfam13020"
                     /db_xref="CDD:463774"
ORIGIN      
        1 mrtivrledl argirvegiv pgaavevval twhgadavel vhkdaagilg eivlyrdqhe
       61 srlapagppg rafdaagadf klaaeaqrir laglldpmla vatsavdplp hqiravygel
      121 lprtplrfll addpgagkti maglfvkell lredakrvlv vapgglveqw qdelfekfgl
      181 rfeiltnqmi eaqldghvfe aaplliarmd qlarnesllg eleestwdlv ivdeahrmga
      241 hyfggkltkt krfqlgerlg rrtrhlllmt atphsgkeed fqlfltlldr drfegryrqg
      301 vhsagtegli rrmvkedllt fegrplfper vaetvpyelt daeaalyeqv ttyvreemnr
      361 aaqldgkrrn tvgfaltvlq rrlasspeai yrslvrrsar lerhrvdvin gtepvfdsas
      421 gwddeeysae eveeleeell daatsartva eldaelaslr dlidsartvr dsatdrkwse
      481 lrtiledhtl atddaggrrk livftehrdt lnylsdritn llgrseavva ihggvrrklr
      541 rqiteeftkn pecqillatd aageglnlqa ahlmvnydlp wnpnrieqrf grihrvgqqe
      601 vcrlwnlvat ntregevfar lldkieeqrh ayggkvfdvl ggafretplr dllleairyg
      661 erpevrarmh qvideqvaeg lrelveeral aqdpigdaql relrrdmdea rarrlqphyi
      721 ewafrngfar lggrlrprer grfeitnvpa dlrqnpvrgp iatryervaf didaapgdvr
      781 adilapghpl hdavmedvva rwgasltrga vlvspaldep qlllgvqeel vdgagrqvsr
      841 rfgyvyvdsg gdvrdagtap yldavvapeg aataaarvlp wlgaaesagt swiiahklpq
      901 ylaeerarra pelaktraai tqrltqevnr laadslaaae kvargekvre speslerrae
      961 dlqerlrarl qeldgqeqms trpvrvvaaa ivlpvsqved dlppeapvha vetkaverrg
     1021 veavlaaela lhrspqeqaf nnpgfdvlsg tghgpplrie vkaridgadd ffvthnevit
     1081 grnvapnyrl amvrvdprga vfdevryldd pfsgvdlgdf estgvkgdwk kmwakasrpf
//
LOCUS       WP_235939531             221 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Occultella kanbiaonis].
ACCESSION   WP_235939531
VERSION     WP_235939531.1
KEYWORDS    RefSeq.
SOURCE      Occultella kanbiaonis
  ORGANISM  Occultella kanbiaonis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ruaniaceae; Occultella.
REFERENCE   1  (residues 1 to 221)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Occultella kanbiaonis"
                     /db_xref="taxon:2675754"
     Protein         1..221
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=23303
     Region          2..208
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mrvlvvddqp lirhslrliv dgapdltvvg eagtgagale qtrelrpdiv lmdlrmpggd
       61 gieatrrita dpaldrtrvl vltmfeldey vhaalgagas gfllkdaepa plvdairrth
      121 ageslfapsv larlvenyls rsapasapat ltgreaqvlt lvgrglsnte itraltismg
      181 tvkthigsll sklhardraq lviaayehgl vsagsparap r
//
LOCUS       WP_235939733             548 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Occultella kanbiaonis].
ACCESSION   WP_235939733
VERSION     WP_235939733.1
KEYWORDS    RefSeq.
SOURCE      Occultella kanbiaonis
  ORGANISM  Occultella kanbiaonis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ruaniaceae; Occultella.
REFERENCE   1  (residues 1 to 548)
  AUTHORS   Mande,S.S., Sarfaty,S., Allen,M.D., Perham,R.N. and Hol,W.G.
  TITLE     Protein-protein interactions in the pyruvate dehydrogenase
            multienzyme complex: dihydrolipoamide dehydrogenase complexed with
            the binding domain of dihydrolipoamide acetyltransferase
  JOURNAL   Structure 4 (3), 277-286 (1996)
   PUBMED   8805537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07992.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Occultella kanbiaonis"
                     /db_xref="taxon:2675754"
     Protein         1..548
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=55847
     Region          4..433
                     /region_name="NirB"
                     /note="NAD(P)H-nitrite reductase, large subunit [Energy
                     production and conversion]; COG1251"
                     /db_xref="CDD:440863"
     Region          456..507
                     /region_name="Fer2_BFD-like"
                     /note="[2Fe-2S]-binding domain of
                     bacterioferritin-associated ferredoxin (BFD) and related
                     proteins; cl40433"
                     /db_xref="CDD:394803"
ORIGIN      
        1 mtgrtrivvv gngmvgsrfv adltardada efdvtllgee eyhpynrvll sevvagkvdl
       61 salalpepdg drvrvergap viaidrasrt vltssgshhy drvvlatgsv aripdlpgle
      121 gdlpagvhal rtlddareiv aatanarrav vigagvlgle aacglarrgl evavihaagt
      181 vmdrqldada grvaqaslag lgiatwtrar trrvvvedgr vtgievdage dpvtlaadlv
      241 vlacgtapev alarsaglav drgvlvgadl aspddprifa igdcaqppeg gagliaqgwd
      301 qarrlagrlt rpdqgpptaa rperpsmalr lslntgvvsr pavpastpal aagtdvvrlk
      361 aaglevvtmg vsgarrnpds ahrsvrlsdp aagrhievvv adgllvgatc vgapdvaadl
      421 saaytrrtpv padpaqllir plasaaapaa tpermpdsat vclcngvtkg divtacraga
      481 htaadvarat rattgcgscn etvcglldwl gaaegptrpt psgrsdaish qaraasennv
      541 ttgqragh
//
LOCUS       WP_235939747             163 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Occultella kanbiaonis].
ACCESSION   WP_235939747
VERSION     WP_235939747.1
KEYWORDS    RefSeq.
SOURCE      Occultella kanbiaonis
  ORGANISM  Occultella kanbiaonis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ruaniaceae; Occultella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Occultella kanbiaonis"
                     /db_xref="taxon:2675754"
     Protein         1..163
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=16816
     Region          <33..>106
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mggdpcrdra vravlghrvt rrprslppll krrtiargsi agllafatet slvflltlyl
       61 qeslgftava aglilgvlgi gtvvggliap rvivrtsata aivagflvqa aatlalaagl
      121 lvavvlprpr gtpdpcaese agehvvpvnq wcprqdsnlq ptd
//
LOCUS       WP_235939744             255 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Occultella kanbiaonis].
ACCESSION   WP_235939744
VERSION     WP_235939744.1
KEYWORDS    RefSeq.
SOURCE      Occultella kanbiaonis
  ORGANISM  Occultella kanbiaonis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ruaniaceae; Occultella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Occultella kanbiaonis"
                     /db_xref="taxon:2675754"
     Protein         1..255
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=27831
     Region          <8..254
                     /region_name="ftrA"
                     /note="transcriptional activator FtrA; Provisional;
                     PRK09393"
                     /db_xref="CDD:181818"
ORIGIN      
        1 mpwsdaidan lvvvpasair edypvdlldv irtahargat ilticsgaft laatglldgk
       61 ratthwryle lfqqrfpqvd vsmdvlyvdn gsiitgagts agidaclhlv rrelgagvan
      121 viarrmvvpp qrdggqrqyv qapvpectad slqpilahvl enlqephsvs slahravmse
      181 rtfarrfvae tgttphrwll qqrvlrarel lertdasieq iagdvgfssa allrahfqtv
      241 vgtapqryrr afstt
//
LOCUS       WP_235939881             796 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Occultella kanbiaonis].
ACCESSION   WP_235939881
VERSION     WP_235939881.1
KEYWORDS    RefSeq.
SOURCE      Occultella kanbiaonis
  ORGANISM  Occultella kanbiaonis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ruaniaceae; Occultella.
REFERENCE   1  (residues 1 to 796)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Occultella kanbiaonis"
                     /db_xref="taxon:2675754"
     Protein         1..796
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=86615
     Region          75..354
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     Region          <166..226
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     Region          <588..758
                     /region_name="YjiC"
                     /note="UDP:flavonoid glycosyltransferase YjiC, YdhE family
                     [Carbohydrate transport and metabolism]; COG1819"
                     /db_xref="CDD:441424"
ORIGIN      
        1 mstepedtad mtgrpvvgrg sptrarvlrf thaaegrvgh taggsippag viaapspgna
       61 ppvrdearpa rapdttgvtv rdgvripyav sgsgattill lptwslvpsr fwkaqvpyla
      121 ryfrvitfdg rgsgaagrpa gapaytdeqy aadaaavlda tgtdravvvg yscgaawavh
      181 laarhpervm alvaiapscg lavaaperek yawdghldtt qgwakynkdy wlgggyddyv
      241 dffarkmfte phstkpiedv vrwahqispq tladttagrl glegatrtpl dplceqvrcp
      301 vlvvhgleda vrpaaigirl adltrgelvl vdggghglpa rdpvrtnlli kefamdtvsv
      361 trpgpaapas sstpdrpdpr wqpqprrrtw traqrrprrv lylsspiglg harrdlavaq
      421 alrthhpdlq idwltqhpvt rvltdagerv hpasawlane sahfedasad hdlhafqair
      481 qmdeilvnnf mvfadvvadg tydlvigdea wdvdyflhen pelkrfsfaw mtdfvgwvpm
      541 pdggeaelal ttdynaemie qraryrrird rsifvgnpdd vvdlafgpgl pgirewtean
      601 fdfagyvtgf vpptdaerea lrrrlglrtd drlcvvtvgg sgvgtsllrr vldavpaarr
      661 avdglhvlvv tgpridpdel prrrgvayrg yvpdlyrhlg acdlavvqgg lttsmelaaa
      721 grpflyvplq hhfeqnvhvr hrleryragr cvdyaeasdp dalaaamaae idhvptalpv
      781 etdgaaraaa mlaell
//
LOCUS       WP_235939910             149 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6325 family protein [Occultella kanbiaonis].
ACCESSION   WP_235939910
VERSION     WP_235939910.1
KEYWORDS    RefSeq.
SOURCE      Occultella kanbiaonis
  ORGANISM  Occultella kanbiaonis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ruaniaceae; Occultella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039728.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19850.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Occultella kanbiaonis"
                     /db_xref="taxon:2675754"
     Protein         1..149
                     /product="DUF6325 family protein"
                     /calculated_mol_wt=14985
     Region          14..139
                     /region_name="DUF6325"
                     /note="Family of unknown function (DUF6325); pfam19850"
                     /db_xref="CDD:437682"
ORIGIN      
        1 matshetrgd gdgfgpielf vvefpgespd rgvisalqdl gadglvalvd lvvvvrrsdm
       61 eivvtefaqg dgaieligeg lvgqddidaa svdlgpgrgv alaalemrwa telasalara
      121 ggkvadvali pahvvnalvg aaasiaeen
//
LOCUS       WP_235939917             910 aa            linear   BCT 02-MAR-2025
DEFINITION  multicopper oxidase domain-containing protein [Occultella
            kanbiaonis].
ACCESSION   WP_235939917
VERSION     WP_235939917.1
KEYWORDS    RefSeq.
SOURCE      Occultella kanbiaonis
  ORGANISM  Occultella kanbiaonis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ruaniaceae; Occultella.
REFERENCE   1  (residues 1 to 910)
  AUTHORS   Page,C.C., Moser,C.C., Chen,X. and Dutton,P.L.
  TITLE     Natural engineering principles of electron tunnelling in biological
            oxidation-reduction
  JOURNAL   Nature 402 (6757), 47-52 (1999)
   PUBMED   10573417
REFERENCE   2  (residues 1 to 910)
  AUTHORS   Grossmann,J.G., Ingledew,W.J., Harvey,I., Strange,R.W. and
            Hasnain,S.S.
  TITLE     X-ray absorption studies and homology modeling define the
            structural features that specify the nature of the copper site in
            rusticyanin
  JOURNAL   Biochemistry 34 (26), 8406-8414 (1995)
   PUBMED   7599131
REFERENCE   3  (residues 1 to 910)
  AUTHORS   Messerschmidt,A., Ladenstein,R., Huber,R., Bolognesi,M.,
            Avigliano,L., Petruzzelli,R., Rossi,A. and Finazzi-Agro,A.
  TITLE     Refined crystal structure of ascorbate oxidase at 1.9 A resolution
  JOURNAL   J Mol Biol 224 (1), 179-205 (1992)
   PUBMED   1548698
REFERENCE   4  (residues 1 to 910)
  AUTHORS   Messerschmidt,A. and Huber,R.
  TITLE     The blue oxidases, ascorbate oxidase, laccase and ceruloplasmin.
            Modelling and structural relationships
  JOURNAL   Eur J Biochem 187 (2), 341-352 (1990)
   PUBMED   2404764
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019352.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07732.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..910
                     /organism="Occultella kanbiaonis"
                     /db_xref="taxon:2675754"
     Protein         1..910
                     /product="multicopper oxidase domain-containing protein"
                     /GO_function="GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=93291
     Region          489..>551
                     /region_name="Cupredoxin"
                     /note="Cupredoxin superfamily; cl19115"
                     /db_xref="CDD:473140"
     Region          645..761
                     /region_name="CuRO_1_CuNIR"
                     /note="Cupredoxin domain 1 of Copper-containing nitrite
                     reductase; cd11020"
                     /db_xref="CDD:259906"
     Site            order(702,704..710,725..728,730..731,734..736,738,748)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:259906"
     Region          766..908
                     /region_name="CuRO_2_CuNIR"
                     /note="Cupredoxin domain 2 of Copper-containing nitrite
                     reductase; cd04208"
                     /db_xref="CDD:259871"
     Site            order(793..794,830,835,837,839..842,844,861..866,868,
                     870..872,887,892..896,899)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:259871"
     Site            892
                     /site_type="other"
                     /note="Cu binding site [ion binding]"
                     /db_xref="CDD:259871"
ORIGIN      
        1 mpaepssptv adpapsatga garpplppmp drsrhhlran apvafwllav vvvaiahrwi
       61 peqrwllvhl lllgavtnav lvwsahftea llrhrptsrr wqavralafn vgvvatvvgv
      121 vgaiwplvia gaivvgaava ahgtalalra rralssrfas tiryyvvasw llpvgaglgs
      181 vmargltdew qarlqvahva vnllgfvglt vlgtlvtlwp tmlrtridpd geassrralw
      241 ilagsvalig agavagsrgv vlaglvgyli giawigtpml rvartktpta mptlsvlagm
      301 cwlvfglvql ivivartpdw aeladavgav tvpfaagfaa qvligamtyl apvvlgggpa
      361 vlratmtaie rgagwrvavv naglvlsvap vpslvlvaas faaliglgsf lpmlvaavvt
      421 nrrsrtsrtg artpqatgpl tpvphryrgq avaglavval avavavaadp aavgagagae
      481 agvsgtgqtt tvvveaadmr fapdvievpa gdelvievhn tdatqvhdlv ldngmssgrl
      541 apgesatiev gvvgrsldaw csvvghrqmg mvlaihvvgg stdagppsgv advdsdtdea
      601 aghdghdmtg atgagaaadl dpsatpasgw etpdavvppi pagttheytf tvgeaeteva
      661 pgvtqtlwtf ngtapgptlh grigdtfvit lvndgtighs idfhagalap depmrtiapg
      721 esltytftat rsgiwmyhca tmpmsahian gmfgaviidp pglapvdrey vliqseyylg
      781 eqggevdpak vaageadlvv fngyanaydf apleavager vriwvlaagp nrgtsfhvvg
      841 gqfdtvfaeg aylltsgeat gggaqtlalg aaqggfvelv mpeagrypvv nhvmsdaerg
      901 ahgvlevtap
//
LOCUS       WP_235940035             375 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4185 domain-containing protein [Occultella kanbiaonis].
ACCESSION   WP_235940035
VERSION     WP_235940035.1
KEYWORDS    RefSeq.
SOURCE      Occultella kanbiaonis
  ORGANISM  Occultella kanbiaonis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ruaniaceae; Occultella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025182.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13810.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Occultella kanbiaonis"
                     /db_xref="taxon:2675754"
     Protein         1..375
                     /product="DUF4185 domain-containing protein"
                     /calculated_mol_wt=39746
     Region          47..366
                     /region_name="DUF4185"
                     /note="Domain of unknown function (DUF4185); pfam13810"
                     /db_xref="CDD:433495"
ORIGIN      
        1 matisaaata alvacgstgg gpdvntdpdr pfvldgvanv triaqltgpd stlndtaava
       61 vagtdlgsmf nvgevtylvf gdtfgtrdpd avggqggnwr snavayttdd dpadgltfdg
      121 wllddiglal evvpgehdgn daggevtkip thgfavgetl ylqymsvrhw gdpgqwdanh
      181 aglarstddg atwetlpapq wpgdsnfvqv svaevtedge nflyfwsips grfggvqlmk
      241 vpasteaved lgayryfagt dddgepiwse smadaqtild gtigelsvvy sptlerwlmt
      301 ystdgdavla egitpwgpws ephvlttqae tpglyspyln pryvsddglt iyftlsiwgp
      361 ynvfwysadl vpapa
//
LOCUS       WP_235940039             103 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF992 domain-containing protein [Bradyrhizobium hipponense].
ACCESSION   WP_235940039
VERSION     WP_235940039.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium hipponense
  ORGANISM  Bradyrhizobium hipponense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06186.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Bradyrhizobium hipponense"
                     /db_xref="taxon:2605638"
     Protein         1..103
                     /product="DUF992 domain-containing protein"
                     /calculated_mol_wt=10038
     Region          <4..99
                     /region_name="DUF992"
                     /note="Protein of unknown function (DUF992); pfam06186"
                     /db_xref="CDD:428812"
ORIGIN      
        1 mrhgprqayv gtvdtlgldi gamsggrmsw vvyapaggrp gmlagdysga aagvtvgaag
       61 pgtntlargp dqavvlqpla vqgqsganla lgishmtlqp aar
//
LOCUS       WP_235939979             239 aa            linear   BCT 02-MAR-2025
DEFINITION  Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal
            domain [Occultella kanbiaonis].
ACCESSION   WP_235939979
VERSION     WP_235939979.1
KEYWORDS    RefSeq.
SOURCE      Occultella kanbiaonis
  ORGANISM  Occultella kanbiaonis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ruaniaceae; Occultella.
REFERENCE   1  (residues 1 to 239)
  AUTHORS   Baumer,S., Ide,T., Jacobi,C., Johann,A., Gottschalk,G. and
            Deppenmeier,U.
  TITLE     The F420H2 dehydrogenase from Methanosarcina mazei is a
            Redox-driven proton pump closely related to NADH dehydrogenases
  JOURNAL   J Biol Chem 275 (24), 17968-17973 (2000)
   PUBMED   10751389
REFERENCE   2  (residues 1 to 239)
  AUTHORS   Alex,L.A., Reeve,J.N., Orme-Johnson,W.H. and Walsh,C.T.
  TITLE     Cloning, sequence determination, and expression of the genes
            encoding the subunits of the nickel-containing
            8-hydroxy-5-deazaflavin reducing hydrogenase from Methanobacterium
            thermoautotrophicum delta H
  JOURNAL   Biochemistry 29 (31), 7237-7244 (1990)
   PUBMED   2207102
REFERENCE   3  (residues 1 to 239)
  AUTHORS   Shuber,A.P., Orr,E.C., Recny,M.A., Schendel,P.F., May,H.D.,
            Schauer,N.L. and Ferry,J.G.
  TITLE     Cloning, expression, and nucleotide sequence of the formate
            dehydrogenase genes from Methanobacterium formicicum
  JOURNAL   J Biol Chem 261 (28), 12942-12947 (1986)
   PUBMED   3531194
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016328.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04432.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Occultella kanbiaonis"
                     /db_xref="taxon:2675754"
     Protein         1..239
                     /product="Coenzyme F420 hydrogenase/dehydrogenase, beta
                     subunit C-terminal domain"
                     /calculated_mol_wt=26344
     Region          <2..143
                     /region_name="FrhB"
                     /note="Coenzyme F420-reducing hydrogenase, beta subunit
                     [Energy production and conversion]; COG1035"
                     /db_xref="CDD:440658"
ORIGIN      
        1 mvigkpcdia gvamaaaarp alaekvalsi gifcagtpst kgteavirrl nleprdvtkl
       61 dyrgegwpgr frvrtrrges asfsyeeswg etlqkhrqwr cmicpdhtge fadlsigdpw
      121 yrkllegeag rslvvvrter grqallaala dgaiaggelp ldrlpqsqpn legtrgavwg
      181 rvltmrllrl aapayrgmpa frlwwklplr gkgtslvgtw rriaarglrr pesdawvdq
//
LOCUS       WP_235940090             407 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding protein [Salipiger sp. PrR007].
ACCESSION   WP_235940090
VERSION     WP_235940090.1
KEYWORDS    RefSeq.
SOURCE      Salipiger sp. PrR007
  ORGANISM  Salipiger sp. PrR007
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024825.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13433.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Salipiger sp. PrR007"
                     /db_xref="taxon:2706884"
     Protein         1..407
                     /product="transporter substrate-binding protein"
                     /calculated_mol_wt=44253
     Region          48..392
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mtasaglrrq eatywqkrla pfglssrhtl garrfsfqer rvtrsidigl lfstsgpyrl
       61 mgqasregal kaieqvnddv eidmvfcpve rdpggdiday aplcedilkn ssarhvigct
      121 tswsrkevip slerlggvlw yptpyegfes sdrvvyahac pnqhllplle hafaaygsrs
      181 yltgsnyiwg wemnriarev sakrgahvlg eryvpigstd iarlvdeiaa lkpdfvlnql
      241 igpsqyafle amaqlraddp afgdnacpvl scnmteaelg amgaaaegvi aagpwfkgma
      301 palpgnegrf dfgssfeaaa hasvmmlarl lssvpdaeal slpellampr aasvgisprt
      361 hhvalpvaia avrngrfvpi ethakiegdp yltqstqrpq pmlrvvr
//
LOCUS       WP_235940188             115 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: response regulator [Roseobacteraceae].
ACCESSION   WP_235940188
VERSION     WP_235940188.1
KEYWORDS    RefSeq.
SOURCE      Roseobacteraceae
  ORGANISM  Roseobacteraceae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales.
REFERENCE   1  (residues 1 to 115)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Roseobacteraceae"
                     /db_xref="taxon:2854170"
     Protein         1..115
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=12359
     Region          1..109
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(88,90..92,94)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 micedeviva mdlqmlvedf gyevigpfpg lreafaalgd qrpdialldv rlkdgevfpl
       61 adrlrdmgvg lvfqsghvyd deihakypqa gcclkpinpa glrtalqtae tvgaa
//
LOCUS       WP_235940360              61 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Bradyrhizobium hipponense].
ACCESSION   WP_235940360
VERSION     WP_235940360.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium hipponense
  ORGANISM  Bradyrhizobium hipponense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 61)
  AUTHORS   Yeo,C.C. and Poh,C.L.
  TITLE     Characterization of IS1474, an insertion sequence of the IS21
            family isolated from Pseudomonas alcaligenes NCIB 9867
  JOURNAL   FEMS Microbiol Lett 149 (2), 257-263 (1997)
   PUBMED   9141667
REFERENCE   2  (residues 1 to 61)
  AUTHORS   Solinas,F., Marconi,A.M., Ruzzi,M. and Zennaro,E.
  TITLE     Characterization and sequence of a novel insertion sequence,
            IS1162, from Pseudomonas fluorescens
  JOURNAL   Gene 155 (1), 77-82 (1995)
   PUBMED   7698671
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01695.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..61
                     /organism="Bradyrhizobium hipponense"
                     /db_xref="taxon:2605638"
     Protein         1..61
                     /product="ATP-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=6448
     Region          <17..>55
                     /region_name="IS21_help_AAA"
                     /note="IS21-like element helper ATPase IstB; NF038214"
                     /db_xref="CDD:439516"
ORIGIN      
        1 mtlklssrpv cigplgpava rfrirelasi rwianannvl llrpgvgktk lavalertdp
       61 g
//
LOCUS       WP_235940393             441 aa            linear   BCT 02-MAR-2025
DEFINITION  pilus assembly protein TadG-related protein [Salipiger sp. PrR007].
ACCESSION   WP_235940393
VERSION     WP_235940393.1
KEYWORDS    RefSeq.
SOURCE      Salipiger sp. PrR007
  ORGANISM  Salipiger sp. PrR007
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 441)
  AUTHORS   Tomich,M., Planet,P.J. and Figurski,D.H.
  TITLE     The tad locus: postcards from the widespread colonization island
  JOURNAL   Nat Rev Microbiol 5 (5), 363-375 (2007)
   PUBMED   17435791
REFERENCE   2  (residues 1 to 441)
  AUTHORS   Kachlany,S.C., Planet,P.J., Bhattacharjee,M.K., Kollia,E.,
            DeSalle,R., Fine,D.H. and Figurski,D.H.
  TITLE     Nonspecific adherence by Actinobacillus actinomycetemcomitans
            requires genes widespread in bacteria and archaea
  JOURNAL   J Bacteriol 182 (21), 6169-6176 (2000)
   PUBMED   11029439
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13400.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Salipiger sp. PrR007"
                     /db_xref="taxon:2706884"
     Protein         1..441
                     /product="pilus assembly protein TadG-related protein"
                     /calculated_mol_wt=48851
     Region          1..44
                     /region_name="Tad"
                     /note="Putative Flp pilus-assembly TadE/G-like; pfam13400"
                     /db_xref="CDD:433177"
     Region          <105..>320
                     /region_name="YfbK"
                     /note="Secreted protein containing bacterial Ig-like
                     domain and vWFA domain [General function prediction only];
                     COG2304"
                     /db_xref="CDD:441879"
ORIGIN      
        1 msyfalvssl vmiafggigv dmvftelnrt kvqntldrav laaadldqil dpedvvadym
       61 akmglgdalv ssdvdeglny rivtadgfve apsnfigllg idtttasgha qaterfnkve
      121 vslvvdisgs mvnnnkmenl kaaasdfvdt llsdgsddlv sislvpyseq vnagpeilsy
      181 lpvnwkhgfs hclempnsvf gsteldtsir ydqmqhfqwn ydgrntltdt vcprydyeri
      241 tpfsqdatal krqigkltpr agtsiflgmk wgaalldpss rniasgliad gevdsvfegr
      301 pvdygdedvl ktvvlmtdgq hdksfrirda yynseseyvq wsknnlwywl nrnvyewqrg
      361 nfyyqkydar tgdtlldnic taakdkgiii wsigfevadh gadvmescas spshffrveg
      421 teiseafsti ahtlnqlrlt q
//
LOCUS       WP_235940429             103 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: glycerol-3-phosphate dehydrogenase C-terminal
            domain-containing protein [unclassified Salipiger].
ACCESSION   WP_235940429
VERSION     WP_235940429.1
KEYWORDS    RefSeq.
SOURCE      unclassified Salipiger
  ORGANISM  unclassified Salipiger
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028211.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16901.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="unclassified Salipiger"
                     /db_xref="taxon:2640570"
     Protein         1..103
                     /product="glycerol-3-phosphate dehydrogenase C-terminal
                     domain-containing protein"
                     /calculated_mol_wt=10902
     Region          <3..100
                     /region_name="GlpA"
                     /note="Glycerol-3-phosphate dehydrogenase [Energy
                     production and conversion]; COG0578"
                     /db_xref="CDD:440343"
ORIGIN      
        1 mphridgtvp qicmvggkct tfrafaeqtt avvlaefgrm raactgtlpi gggrdfpgsa
       61 alrqalrqrf gvsedraarm aetygpraqd vlafcadrgd dlp
//
LOCUS       WP_235940433              84 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing
            protein [Salipiger sp. PrR007].
ACCESSION   WP_235940433
VERSION     WP_235940433.1
KEYWORDS    RefSeq.
SOURCE      Salipiger sp. PrR007
  ORGANISM  Salipiger sp. PrR007
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 84)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02737.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Salipiger sp. PrR007"
                     /db_xref="taxon:2706884"
     Protein         1..84
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /GO_function="GO:0070403 - NAD+ binding [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=9415
     Region          <42..84
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
ORIGIN      
        1 mgsrggylpd krhiephrcr daarrgdlle fvrdlchrha gpervvlgqp fnppqlvplv
       61 elagreataa wvldeverfh trlg
//
LOCUS       WP_235940546             462 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Bradyrhizobium hipponense].
ACCESSION   WP_235940546
VERSION     WP_235940546.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium hipponense
  ORGANISM  Bradyrhizobium hipponense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 462)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 462)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012234.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00004.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Bradyrhizobium hipponense"
                     /db_xref="taxon:2605638"
     Protein         1..462
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=51370
     Region          <121..>272
                     /region_name="clpC"
                     /note="Clp protease ATP binding subunit; CHL00095"
                     /db_xref="CDD:214361"
     Region          228..>272
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Region          <251..391
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            order(260..262,278,280..281,321..322)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410908"
ORIGIN      
        1 maremtttrl wtplpiellw qrgwppaall fwsriseien vsrdqvaadf wsgkkerskv
       61 acrtladllf avghgeeaia almlaadpvk pqtfeivlpq lgyavehlwd wpvasitrsq
      121 alqrlaiwwr aargdfeede hsiffitrle mldqdtasgk rsvtgalira khknepkdfg
      181 lvvmpkdkat alskqqsgfe dlldvrlplv iardldtvrt tltkeyphat taidlvlrdl
      241 regepvrlks llltgptgvg ksrlvrrlgd llgigvyryd gssasdnmfg gspkawsntt
      301 psaparainq mrianpilmv deadksgtss hngrlwdall pfleretaak yrdvsldael
      361 nlsfisyiat antvdllpap lrdrfrivkv paprlcdlpl laanvlqdla vesgehgfmw
      421 plahdelevm arawetagfs irklqtiiea tiearnasav rh
//
LOCUS       WP_235940551              43 aa            linear   BCT 02-MAR-2025
DEFINITION  transcriptional regulator domain-containing protein [Bradyrhizobium
            hipponense].
ACCESSION   WP_235940551
VERSION     WP_235940551.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium hipponense
  ORGANISM  Bradyrhizobium hipponense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 43)
  AUTHORS   Jowsey,W.J., Morris,C.R.P., Hall,D.A., Sullivan,J.T.,
            Fagerlund,R.D., Eto,K.Y., Solomon,P.D., Mackay,J.P., Bond,C.S.,
            Ramsay,J.P. and Ronson,C.W.
  TITLE     DUF2285 is a novel helix-turn-helix domain variant that
            orchestrates both activation and antiactivation of conjugative
            element transfer in proteobacteria
  JOURNAL   Nucleic Acids Res 51 (13), 6841-6856 (2023)
   PUBMED   37246713
REFERENCE   2  (residues 1 to 43)
  AUTHORS   Knittel,V., Sadana,P., Seekircher,S., Stolle,A.S., Korner,B.,
            Volk,M., Jeffries,C.M., Svergun,D.I., Heroven,A.K., Scrima,A. and
            Dersch,P.
  TITLE     RovC - a novel type of hexameric transcriptional activator
            promoting type VI secretion gene expression
  JOURNAL   PLoS Pathog 16 (9), e1008552 (2020)
   PUBMED   32966346
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040446.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20109.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..43
                     /organism="Bradyrhizobium hipponense"
                     /db_xref="taxon:2605638"
     Protein         1..43
                     /product="transcriptional regulator domain-containing
                     protein"
                     /calculated_mol_wt=4865
     Region          <2..42
                     /region_name="DUF6499"
                     /note="Family of unknown function (DUF6499); pfam20109"
                     /db_xref="CDD:437941"
ORIGIN      
        1 mpalaweclr rnadfqhdhq nsspaapsvt pdfrqrwglv frs
//
LOCUS       WP_235940564             189 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Bradyrhizobium
            hipponense].
ACCESSION   WP_235940564
VERSION     WP_235940564.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium hipponense
  ORGANISM  Bradyrhizobium hipponense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 189)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 189)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 189)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 189)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Bradyrhizobium hipponense"
                     /db_xref="taxon:2605638"
     Protein         1..189
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=20262
     Region          <2..177
                     /region_name="ArpD"
                     /note="ABC-type protease/lipase transport system, ATPase
                     and permease components [Intracellular trafficking,
                     secretion, and vesicular transport]; COG4618"
                     /db_xref="CDD:443660"
ORIGIN      
        1 mvrldgadvh swtrehfgrc vgylpqdvel fpgtvrenis rmdedadpaa vvaaaqmagv
       61 hdmilrlpkg ydteigeqga vlsggqrqrv glaralfgtp sllvldepna sldapgeqal
      121 neairsmkea gttvvviahr pslmahvdkv lvlnegqvel fgersavlgq iqrravqpad
      181 tkhvravka
//
LOCUS       WP_235940615             303 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Bradyrhizobium
            hipponense].
ACCESSION   WP_235940615
VERSION     WP_235940615.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium hipponense
  ORGANISM  Bradyrhizobium hipponense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Bradyrhizobium hipponense"
                     /db_xref="taxon:2605638"
     Protein         <1..>303
                     /product="Ig-like domain-containing protein"
     Region          <3..212
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          185..296
                     /region_name="Big_13"
                     /note="Bacterial Ig-like domain; pfam19077"
                     /db_xref="CDD:465968"
ORIGIN      
        1 aptvaitsag gstnqasqti tgtvdvadag asvtildgtt aigtaivqgn gswsttvsln
       61 ngansltarv sdaagntats savvytlstt gptvtealva dtgssatdhv tanpavngtg
      121 lantvvhfti dgssiattvt tdaqgawsft psgladgsht ivasqtdpfg ntgsaslsft
      181 ldtatpsggt pdltagsdtg tsntdnitsa tsptftvalt ptaavgdtvq lllggsplah
      241 pvthvitatd vtagsisltv tagdlgadgt kqiaaqfsda agnssttsal sfildtaapt
      301 vai
//
LOCUS       WP_235940631              97 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Bradyrhizobium
            hipponense].
ACCESSION   WP_235940631
VERSION     WP_235940631.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium hipponense
  ORGANISM  Bradyrhizobium hipponense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Bradyrhizobium hipponense"
                     /db_xref="taxon:2605638"
     Protein         <1..>97
                     /product="Ig-like domain-containing protein"
     Region          <8..49
                     /region_name="Big_13"
                     /note="Bacterial Ig-like domain; pfam19077"
                     /db_xref="CDD:465968"
ORIGIN      
        1 llglatisag nwsyttaalv dgshsftaka tdnagntttt saltatvdtt pptetistti
       61 ttdtgatpti tsggttkdnt lglsgtvsda hgvssvq
//
LOCUS       WP_235940666             446 aa            linear   BCT 02-MAR-2025
DEFINITION  lyase family protein [Paramicrobacterium fandaimingii].
ACCESSION   WP_235940666
VERSION     WP_235940666.1
KEYWORDS    RefSeq.
SOURCE      Paramicrobacterium fandaimingii
  ORGANISM  Paramicrobacterium fandaimingii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Paramicrobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00206.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Paramicrobacterium fandaimingii"
                     /db_xref="taxon:2708079"
     Protein         1..446
                     /product="lyase family protein"
                     /calculated_mol_wt=46391
     Region          20..438
                     /region_name="Lyase_I_like"
                     /note="Lyase class I_like superfamily: contains the lyase
                     class I family, histidine ammonia-lyase and phenylalanine
                     ammonia-lyase, which catalyze similar beta-elimination
                     reactions; cl00013"
                     /db_xref="CDD:469578"
     Site            order(172,179,182..183,186,242,252..253,256,259..260,290,
                     293,296,299..300)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:176466"
ORIGIN      
        1 midegllapv arghdgpvad safldalvsa eyglvaaygd iglapadavd tfahacgvad
       61 rdgrsasgld vgqvadaava ggnpviplvg mlrermpreh rvwvhrgats qdildsaimm
      121 vardaltqvc aslteaaehl tqrahthrdd vaaartltqh avpttiglrl ttwarglqha
      181 adrlaalelp aqlggaggtl asfveitgsa draqdlasaf aaragaveav apwhvtrwpv
      241 telgdalvaa ldamgklagd ittlsrteia evaegsgggs sampqkqnpt eavlirsaal
      301 rapnlsatlh lasafavder pdgawhaewp tlrdllrlal gaswhvsnla rhlrvdaera
      361 amnlarsggl vlserlslvl kpligadavt aivtaasagd dlrslvqdal trhnidrtvd
      421 dlldpaaytg iaaelvdrgr dteesr
//
LOCUS       WP_235940698            1192 aa            linear   BCT 02-MAR-2025
DEFINITION  efflux RND transporter permease subunit [Paramicrobacterium
            fandaimingii].
ACCESSION   WP_235940698
VERSION     WP_235940698.1
KEYWORDS    RefSeq.
SOURCE      Paramicrobacterium fandaimingii
  ORGANISM  Paramicrobacterium fandaimingii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Paramicrobacterium.
REFERENCE   1  (residues 1 to 1192)
  AUTHORS   Murakami,S., Nakashima,R., Yamashita,E. and Yamaguchi,A.
  TITLE     Crystal structure of bacterial multidrug efflux transporter AcrB
  JOURNAL   Nature 419 (6907), 587-593 (2002)
   PUBMED   12374972
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00873.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1192
                     /organism="Paramicrobacterium fandaimingii"
                     /db_xref="taxon:2708079"
     Protein         1..1192
                     /product="efflux RND transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=123583
     Region          28..1157
                     /region_name="AcrB"
                     /note="Multidrug efflux pump subunit AcrB [Defense
                     mechanisms]; COG0841"
                     /db_xref="CDD:440603"
     Region          <502..646
                     /region_name="PTZ00436"
                     /note="60S ribosomal protein L19-like protein;
                     Provisional"
                     /db_xref="CDD:185616"
ORIGIN      
        1 mhllsvaslk nralialvtv vvavfgvisl tglkqelapn itfpqlaivt nypgaspnvv
       61 nddlstpiek aisgvpgles tsatsstnls lvsatftygt dldtaeqkin qaierisstl
      121 psdadpqvma gslddlpiiq vavtggdnae lndllervav pkledvegvr eaaivgaagq
      181 rvtitpdvee lakvgattqa indalqqngt ligageited gstysvqsgt klgsvddlta
      241 lpltgvtppd gevvtlgdva sveltenpqt thsrvngeda ltmsitklpd antvdvshgi
      301 tdalpelees lgsdvtltiv fdqapyieqs ieslstegll glvfavlvil lflldvratl
      361 vtaisiptsv litfiglqvs dytlniltlg altiaigrvv ddsivvieni krhlglsver
      421 tgasrlqaia tavrevagai tastittvav flplalvgdm tgelfrpfal tvtiallasl
      481 lvsltivpvl aywflrapte kqqakiearq qkqadavsak nrareeadaa rvakrqqkqa
      541 akaerrdtts akpaqdavaa saeasesaep daasvakpsi apmpaivsas yvrqaktpgv
      601 saddsareqt daeesatvse ehtaadaare stasartrrg rrqaqtdhed elkhptrlqr
      661 sylpiirwtl khsattiila llvmgvtlaa apfmktnflg dsgqntlsvt qtlqpgasld
      721 aqdqaaskve dalldidgie tvqvsigssg nsltsafggg gegavtfsit tdvdadqtal
      781 qqsvrdklat iddagtieva assgfgassd ievditatss ddlekatkav hdavsdlgsv
      841 aevsdnlaes rpyievavdr qdaaeagyse ialssfvaga tkpqqsgtvv iddttltiyv
      901 etadepatld elraleiptp tgvvalstla svevtdgpqs vttvngdrsa tvsatpagdn
      961 igaasvevqe avdtvdlpag asaelggvsa dqdtafqqlg lamlaailiv yivmvatfrs
     1021 lrqpllllvs vpfaatggig lqlatgvplg vpsligvlml igivvtnaiv lvdlvnqyrd
     1081 rglsvadave hgsvrrlrpi lmtalatifa ltpmalgitg hggfisqpla ivvigglvss
     1141 tvltlivlpt lynlvegakd rraakrarka eaaaerdnad avptesesag vr
//
LOCUS       WP_235940767             431 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF998 domain-containing protein [Paramicrobacterium fandaimingii].
ACCESSION   WP_235940767
VERSION     WP_235940767.1
KEYWORDS    RefSeq.
SOURCE      Paramicrobacterium fandaimingii
  ORGANISM  Paramicrobacterium fandaimingii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Paramicrobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017959.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06197.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Paramicrobacterium fandaimingii"
                     /db_xref="taxon:2708079"
     Protein         1..431
                     /product="DUF998 domain-containing protein"
                     /calculated_mol_wt=46104
     Region          38..>327
                     /region_name="UPF0182"
                     /note="Uncharacterized protein family (UPF0182); cl42153"
                     /db_xref="CDD:477987"
ORIGIN      
        1 msavrrpara asastrrdgr rginveveal lagvsaalia gafafivfgg msvpiwtdwe
       61 wgrwsigmvs vsavvvlgtl aagvgywrsr rldgqewrle lpswkfllda vvvaivhtal
      121 galatavllf vvqlafrrlt idpvsasigc avvtglaaym lylavsrlnt vslsqrmflf
      181 vgvglltama tstdpvwwry qisalgaygn rpsisfnail vvagilvttf alyvdrdirn
      241 lhsarviryr raaplvsvlf iamgvalagi glvpvnvsvp vhnvfavgls aifgllmlvs
      301 pialrgmplp fflatlgsli lligatwlfy gpgilpltny eliafgvlfa witmfvrfla
      361 amlaarraea vpvenavpve navpvenaap vndsvqtpda vaeaeqtfmp lpndvparpp
      421 lpnpddtglr r
//
LOCUS       WP_235940736             313 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Paramicrobacterium
            fandaimingii].
ACCESSION   WP_235940736
VERSION     WP_235940736.1
KEYWORDS    RefSeq.
SOURCE      Paramicrobacterium fandaimingii
  ORGANISM  Paramicrobacterium fandaimingii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Paramicrobacterium.
REFERENCE   1  (residues 1 to 313)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 313)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Paramicrobacterium fandaimingii"
                     /db_xref="taxon:2708079"
     Protein         1..313
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=33096
     Region          5..297
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(10,12..13,15,38..40,96..98,149,159..160,189,193,
                     218..221)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:212492"
     Site            order(119,160,189,193)
                     /site_type="active"
                     /db_xref="CDD:212492"
ORIGIN      
        1 msagtvlvtg ptgglgrsav mamarrpapk rpdlllvgre gprldavaeh araegahvet
       61 ipadlaqlsd vraaglrvke lvdaaavapl ralvanagas vvdtrrasad gyeltfavny
      121 lahaqligdl ldsfaspsrv vllgsntyyl navrrllgvp paqwrdplel atplaagetp
      181 ttraagvays nsklallyya helqrrapdg vgvavfepgy mpgtglfreq gaamlrvgrm
      241 leripgissp arsgpalasv tlderwshlr dgafvvktrq rdvepfaldr arearlweat
      301 aellggvsvg eer
//
LOCUS       WP_235940887             272 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Paramicrobacterium
            fandaimingii].
ACCESSION   WP_235940887
VERSION     WP_235940887.1
KEYWORDS    RefSeq.
SOURCE      Paramicrobacterium fandaimingii
  ORGANISM  Paramicrobacterium fandaimingii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Paramicrobacterium.
REFERENCE   1  (residues 1 to 272)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 272)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 272)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 272)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Paramicrobacterium fandaimingii"
                     /db_xref="taxon:2708079"
     Protein         1..272
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=28738
     Region          4..>256
                     /region_name="YejF"
                     /note="ABC-type microcin C transport system, duplicated
                     ATPase component YejF [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG4172"
                     /db_xref="CDD:443332"
ORIGIN      
        1 mkkaqmsfle vshltvrsad gdalvddvsf svdagervgl igesgsgksv tslavtglld
       61 agliasgsvl ldgqqvvgas drmlrplrgp aasivfqepl taldplmrvg kqvaepiarh
      121 rklrgaelrg avhdalvdva lpderfaraf phelsggqrq rvaiaialaa qprlliadep
      181 ttaldvtvqn eildlldrlv aehdmallfi shdlavvsrm vqrvvvlqdg vavesgpvnd
      241 vitapqheyt qklvasaral dstldgvthe pp
//
LOCUS       WP_235940908             188 aa            linear   BCT 02-MAR-2025
DEFINITION  TetR family transcriptional regulator [Paramicrobacterium
            fandaimingii].
ACCESSION   WP_235940908
VERSION     WP_235940908.1
KEYWORDS    RefSeq.
SOURCE      Paramicrobacterium fandaimingii
  ORGANISM  Paramicrobacterium fandaimingii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Paramicrobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012655.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00440.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Paramicrobacterium fandaimingii"
                     /db_xref="taxon:2708079"
     Protein         1..188
                     /product="TetR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=19640
     Region          8..179
                     /region_name="YbjK"
                     /note="DNA-binding transcriptional regulator YbjK
                     [Transcription]; COG3226"
                     /db_xref="CDD:442459"
ORIGIN      
        1 mtlptvpliv ergiakttar diaaaagvsl aaigyhfgsk drlvtealve tlgtgigddl
       61 enlvlegtga slldgfatlv ndvpsvfaan reallaslen vvhvlrdsse srklheavae
      121 gyrgmaknlv lahpelderq ansiarlyyv ltqslgilwl ldsealpsgd elaeavatig
      181 gshtvpns
//
LOCUS       WP_235940910             797 aa            linear   BCT 02-MAR-2025
DEFINITION  family 78 glycoside hydrolase catalytic domain [Paramicrobacterium
            fandaimingii].
ACCESSION   WP_235940910
VERSION     WP_235940910.1
KEYWORDS    RefSeq.
SOURCE      Paramicrobacterium fandaimingii
  ORGANISM  Paramicrobacterium fandaimingii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Paramicrobacterium.
REFERENCE   1  (residues 1 to 797)
  AUTHORS   Zverlov,V.V., Hertel,C., Bronnenmeier,K., Hroch,A., Kellermann,J.
            and Schwarz,W.H.
  TITLE     The thermostable alpha-L-rhamnosidase RamA of Clostridium
            stercorarium: biochemical characterization and primary structure of
            a bacterial alpha-L-rhamnoside hydrolase, a new type of inverting
            glycoside hydrolase
  JOURNAL   Mol Microbiol 35 (1), 173-179 (2000)
   PUBMED   10632887
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017410.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05592.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Paramicrobacterium fandaimingii"
                     /db_xref="taxon:2708079"
     Protein         1..797
                     /product="family 78 glycoside hydrolase catalytic domain"
                     /calculated_mol_wt=86918
     Region          <87..788
                     /region_name="rhamnosid_Stmyc"
                     /note="alpha-L-rhamnosidase; NF041573"
                     /db_xref="CDD:469458"
ORIGIN      
        1 mvvdsdeqly vpwpfaplas rervrvrvrv gsgntwtdes epleieagll eqddwvkqli
       61 spstigrldd gapllfgsad ldaepisarl yltahgivef tingnrigdd vfapgwtaye
      121 krlryrsydv tplvrrgtne lraligngwy rgqlvwpgnr ssygdrlgal aqlevnyadg
      181 sreifgtdds wgavpssilf ddfydgqrrd lritdspegk rvdsvdvldg dfarliapsg
      241 ppvritetla avqllttpsg ktivdfgqnl vgwvrlrvhg eagtvvtirh aevlehgelg
      301 vrplrsalat ctytlsgqpe eilqptftfn gfryaeisgv pelaladvea lvlgtdlqrt
      361 gwfessdprv nrlhenvvws trgnfldvpt dcpqrderlg wtgdlqvfap tatflfdtag
      421 flsgwlgdla aeqkpdggvp yvipdvlrep dpaaaawsda ativpeavhh aygdvgvlrq
      481 qypsmkawve kvrsivgpdl lwrtgaqfgd wldptappdd asraqadpav vatayfarsv
      541 gilactaetl glrveaadya qlekqvraaf isayvsedgr vhsdcqtvya lsivgdlfas
      601 erqragagdr laelvtaagf rvstgfvgtp vildalstag ypelayrmll eescpswlya
      661 vsmgattiwe rwdsmlsdgs inpgsmtsfn hyaygavadw lhrcvaglsp sspgyrtvdv
      721 rplvtgdlss asarhlspyg eiavewrlen gqvdltltip ygvtadvwmp gasvaetvrn
      781 gshrlrselq plqyase
//
LOCUS       WP_235940958            1195 aa            linear   BCT 02-MAR-2025
DEFINITION  proline dehydrogenase family protein [Paramicrobacterium
            fandaimingii].
ACCESSION   WP_235940958
VERSION     WP_235940958.1
KEYWORDS    RefSeq.
SOURCE      Paramicrobacterium fandaimingii
  ORGANISM  Paramicrobacterium fandaimingii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Paramicrobacterium.
REFERENCE   1  (residues 1 to 1195)
  AUTHORS   Ling,M., Allen,S.W. and Wood,J.M.
  TITLE     Sequence analysis identifies the proline dehydrogenase and delta
            1-pyrroline-5-carboxylate dehydrogenase domains of the
            multifunctional Escherichia coli PutA protein
  JOURNAL   J Mol Biol 243 (5), 950-956 (1994)
   PUBMED   7966312
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013761.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01619.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1195
                     /organism="Paramicrobacterium fandaimingii"
                     /db_xref="taxon:2708079"
     Protein         1..1195
                     /product="proline dehydrogenase family protein"
                     /calculated_mol_wt=127491
     Region          14..1020
                     /region_name="PutA"
                     /note="Proline dehydrogenase [Amino acid transport and
                     metabolism]; COG0506"
                     /db_xref="CDD:440272"
     Region          501..980
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     Site            order(642..646,654,669,671..672,720..723,726,729..730,
                     742..744,776,883,885,911,951)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143443"
     Site            order(646,742,773,776)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143443"
ORIGIN      
        1 mstsqtsasn atqpqtrpqd laddaialak rwlseaadip adasgerlag vlsdpnglaf
       61 tvgfvdgvvr pedlhaaakk lkeltpltpq flpaalrgai glggafakpl pqivvpiarr
      121 vlremvshli idasdaklgp aiakikkddv glninllgea ilgeheaerr iagtkallar
      181 kdvdyvsikv sstvaphnhw afneaveriq nhlaplleqa knaspqkfin ldmeeykdld
      241 ltlavftgil drpefkqlea givlqaylpd algammhlqe waaqrvadgg apikvrlvkg
      301 anlpmehvda aihgwpaatw dtkqgsdtsy kavldyalhp erirnlrvgv aghnlfdval
      361 awllakarga qdgvdfemll gmatgqaevv krdvgsllly tpvvhpqefd vaiaylirrl
      421 eegashenfm savfelnese tlferekqrf lasladleai tgdgdvesfd vpkpsrqqdr
      481 rdydeagaea rietriaagr ngefentpdt dpdldgnrew graianrmae salgvaqvea
      541 ahisdeasln daiergisaa dawqalgade rarilyrage kleerradll evagseagkt
      601 ldqgdpevse aidfanyyam lgqqleqvdg ashtskklva vippwnfpia ipaggtlagl
      661 asgasviikp asnsartgav mvealwdagv prdvlqlaqf sdrelasklv sdervdrlil
      721 tgsyetastf relrqdlpil aetsgknaii vtpnadldla akdvaqsafg hagqkcsaas
      781 lvilvgsvak skrfrsqlld avqslkvgtp ehlstqmgpv itapsgkllr glttlgpges
      841 waikpeplas dsplaldkng enklwspgvr dgvqrgseyh lveyfgpilg imtadtldea
      901 idmvndieyg lttglhslds delatwldrv qagnlyanrg itgaivrrqs fggwkksaig
      961 agtkaggpny lhglvdwsda apagssrspr vpaaallgaa ersgvtgdel dwlasalgtd
     1021 atawadefgi ardasqlgve rnmlrycpvn vtirvaadap lhhvvravaa glaaestptv
     1081 stpialperi mnamrasgva ihfednaawm krvadlaakq gpeaseriri vagasreaev
     1141 atvyaaskgk pdvavyggev vsagrvemlp hlheqavsit ahrfgtpstl sdgvi
//
LOCUS       WP_235940984             177 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5683 domain-containing protein [Cyclobacterium roseum].
ACCESSION   WP_235940984
VERSION     WP_235940984.1
KEYWORDS    RefSeq.
SOURCE      Cyclobacterium roseum
  ORGANISM  Cyclobacterium roseum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Cyclobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040144.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18935.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Cyclobacterium roseum"
                     /db_xref="taxon:2666137"
     Protein         1..177
                     /product="DUF5683 domain-containing protein"
                     /calculated_mol_wt=19531
     Region          30..177
                     /region_name="DUF5683"
                     /note="Family of unknown function (DUF5683); pfam18935"
                     /db_xref="CDD:465918"
ORIGIN      
        1 mqiapqaaaq viseietsde dtivlvapds vknpkkavll slifpgagqv ynekvwklpl
       61 lyggvatsvy flefnnrryq eflaaleivr eeggepspfp nlnedgiirn vnywrrnrda
      121 mymvfgaiya lgavdafvda hlssfdvsdd lsikieptte pimayghavg ialkfkf
//
LOCUS       WP_235941141             579 aa            linear   BCT 02-MAR-2025
DEFINITION  BamA/TamA family outer membrane protein [Cyclobacterium roseum].
ACCESSION   WP_235941141
VERSION     WP_235941141.1
KEYWORDS    RefSeq.
SOURCE      Cyclobacterium roseum
  ORGANISM  Cyclobacterium roseum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Cyclobacterium.
REFERENCE   1  (residues 1 to 579)
  AUTHORS   Heinz,E. and Lithgow,T.
  TITLE     A comprehensive analysis of the Omp85/TpsB protein superfamily
            structural diversity, taxonomic occurrence, and evolution
  JOURNAL   Front Microbiol 5, 370 (2014)
   PUBMED   25101071
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013283.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01103.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Cyclobacterium roseum"
                     /db_xref="taxon:2666137"
     Protein         1..579
                     /product="BamA/TamA family outer membrane protein"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /calculated_mol_wt=66080
     Region          <59..579
                     /region_name="BamA"
                     /note="Outer membrane protein assembly factor BamA [Cell
                     wall/membrane/envelope biogenesis]; COG4775"
                     /db_xref="CDD:443807"
ORIGIN      
        1 mvkcskalfl yflltglvls tqaqdstykl sleisengrl lqrsertfpd slaiydhakr
       61 lidslqwqgy lnvedslvfl terkahllle tgpefywlyl ekgnlepwml gsaafsrihf
      121 qerpfrfgev rqlieevlet gqnegypfia vnldsltvse kqvgarinvn kgpwiafdtl
      181 qisgssrtqp lylarklkll pgapfsqkkl dqavsrlgni pyirldgspe lsfqneeatv
      241 ylpvtdrkin tldgiigllp neveankwlv tgqfdvqlyn vsgkgrdyll nwqrlsqysq
      301 nltiearepf vlgsqldlgl afsflkedtt flnrefnvti gmqlspkidl sffgkrqagd
      361 lldvsryeea nelpdiadfr ynnygttlrf ndvddvlmpk ngwrgsfmag ignkklvent
      421 glpqalyaev krntiqyylq gnveryllwr rklstklamn ggemynsnlf lndlfrlggl
      481 qsirgfneny ffasrylyft vepryyisde syfllfsdlg mlenrvtgrp tewplafggg
      541 lsletnggif tfvyalgqas dqpigfsysr ihfgftgrf
//
LOCUS       WP_235941246              93 aa            linear   BCT 02-MAR-2025
DEFINITION  YolD-like family protein [Paenibacillus puerhi].
ACCESSION   WP_235941246
VERSION     WP_235941246.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus puerhi
  ORGANISM  Paenibacillus puerhi
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 93)
  AUTHORS   Makarova,K.S., Anantharaman,V., Grishin,N.V., Koonin,E.V. and
            Aravind,L.
  TITLE     CARF and WYL domains: ligand-binding regulators of prokaryotic
            defense systems
  JOURNAL   Front Genet 5, 102 (2014)
   PUBMED   24817877
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 93)
  AUTHORS   Permina,E.A., Mironov,A.A. and Gelfand,M.S.
  TITLE     Damage-repair error-prone polymerases of eubacteria: association
            with mobile genome elements
  JOURNAL   Gene 293 (1-2), 133-140 (2002)
   PUBMED   12137951
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020438.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08863.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Paenibacillus puerhi"
                     /db_xref="taxon:2692622"
     Protein         1..93
                     /product="YolD-like family protein"
                     /calculated_mol_wt=10480
     Region          <20..90
                     /region_name="YolD"
                     /note="YolD-like protein; pfam08863"
                     /db_xref="CDD:430270"
ORIGIN      
        1 mamqaeggvp kpgkkyglkr ptrdefelee lgnqlveakq eeseveltiw gadpvrgris
       61 eldartrmvh vshrygdvvk vpfldvmkvd ypr
//
LOCUS       WP_235941280             534 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Paenibacillus puerhi].
ACCESSION   WP_235941280
VERSION     WP_235941280.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus puerhi
  ORGANISM  Paenibacillus puerhi
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 534)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 534)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 534)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 534)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Paenibacillus puerhi"
                     /db_xref="taxon:2692622"
     Protein         1..534
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=59270
     Region          44..530
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mkkqtwnklv alslttalaw gtlagcatse pqtggstpea kkkdpvtlkv eifdrgnaps
       61 gqsatdnywt kwmqekfatp nnikleyvpv praqevqkln vlmasggdap divftydsnl
      121 vnnyvqqggl adigqaldeh gknlkaflge dtlaygkfng vqyaiparrv nlgkyasyvr
      181 qdwlealnmp vpknteevya tlkafkekdp gkvgkdlipl glalaaasve piiwpfikkd
      241 lteeekytlr mqlgsndyav ltpghkeavq fmnklynegl vspdfaldkd kkkmnqdimt
      301 gkvgmfseds vnplqaspgv ykvlqtnvkg akllpidpfa gadgkhtkpk ympagmyimi
      361 pkssknvkea iqyldfmaqk dnyftimnge egknykmedg vpvridsqet kdrmfiggdf
      421 miisngqdlg deaknstlai kslppeyake gelarqislt dtepqvrfpr piqaevkygs
      481 slvdkyyeli vksmlakpad fdktyeqslk dfmnsggqei anerkaayqe mkkk
//
LOCUS       WP_235941363             241 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3939 domain-containing protein [Paenibacillus puerhi].
ACCESSION   WP_235941363
VERSION     WP_235941363.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus puerhi
  ORGANISM  Paenibacillus puerhi
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024475.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13075.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Paenibacillus puerhi"
                     /db_xref="taxon:2692622"
     Protein         1..241
                     /product="DUF3939 domain-containing protein"
                     /calculated_mol_wt=26967
     Region          42..160
                     /region_name="DUF3939"
                     /note="Protein of unknown function (DUF3939); pfam13075"
                     /db_xref="CDD:432958"
ORIGIN      
        1 mmkgwkrlsa mlvllcllag cmypnelrke nqlasgeyvm vvqnaidqyk sktgvlpikn
       61 seestplyek ypidfkklqg kylsavpana fesggtatyv lvdvetkptv kmldltsfqq
      121 tldiqqavna ymskhsslpi gepvaqgfht idfvklnrkp advrsvytpq vrlpfllhds
      181 gtvtidyspe imrlidrkql qskltagqdl rallveesyf vparsfgyrw nngqpepita
      241 p
//
LOCUS       WP_235941488             370 aa            linear   BCT 02-MAR-2025
DEFINITION  BF3164 family lipoprotein [Cyclobacterium roseum].
ACCESSION   WP_235941488
VERSION     WP_235941488.1
KEYWORDS    RefSeq.
SOURCE      Cyclobacterium roseum
  ORGANISM  Cyclobacterium roseum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Cyclobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027202.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15869.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Cyclobacterium roseum"
                     /db_xref="taxon:2666137"
     Protein         1..370
                     /product="BF3164 family lipoprotein"
                     /calculated_mol_wt=41812
     Region          61..345
                     /region_name="TolB_like"
                     /note="TolB-like 6-blade propeller-like; pfam15869"
                     /db_xref="CDD:406329"
ORIGIN      
        1 mtltkntnqi linvailivi llpltncsed klksdnlksf tektiprtmn lvgnkyffen
       61 iknplkifvk nnkliigesr ripeeyppih iidaknmkyl rpfgkrgfgp gevsdvsgid
      121 lggkentfwv ysamskyfse ftlddtttls knqikqegdl fmamamawss dstvmcrlvn
      181 dphqfvefsi dgrrlanygk wqdhlvredl tnymmsdlhl grfkgnqqnn iyasagfyrd
      241 rieilnkesg sifitdgpfn yipeftivns sgssgklivd aaepsayydi sisknyifgl
      301 ysgktekqks esseiandiy vfdlegtiks kfilnisirg ltvdeenqki ygittdenpg
      361 lavfdlpnlk
//
LOCUS       WP_235941605             460 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4270 family protein [Cyclobacterium roseum].
ACCESSION   WP_235941605
VERSION     WP_235941605.1
KEYWORDS    RefSeq.
SOURCE      Cyclobacterium roseum
  ORGANISM  Cyclobacterium roseum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Cyclobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025458.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14092.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Cyclobacterium roseum"
                     /db_xref="taxon:2666137"
     Protein         1..460
                     /product="DUF4270 family protein"
                     /calculated_mol_wt=51182
     Region          35..458
                     /region_name="DUF4270"
                     /note="Domain of unknown function (DUF4270); pfam14092"
                     /db_xref="CDD:433711"
ORIGIN      
        1 mkvitistrt llanvhgfli alliftsacs dpseiglvle pdsnqigvfy eeiplspylv
       61 ladsfnttsq grllvggdqs effgttqaig ysrlsfnpng ippepdalfd savftmnvvd
      121 ligedfdeek afrvhrltep ildtayynfn hlsfeedkti asgsfllepd tvnqlrmdvs
      181 pdlsaelfek lttddpvfdd ifafrdyfpg iaitgdpgqn tslslatgsg tgmvlyyhyd
      241 gdtvstaypi ntiqsrhfng ilndrqgsdi ssvvergeay evpgervgtk aglglmvkld
      301 msalhgfldt lenitfnqim levgpveeyp efkapynplv myfatednei yrrfdgekva
      361 iqaegqghtg ldpegnvvpt tnnqtgliyn sedrlyanqi tsyvnaiyrs glvrtdlffy
      421 pnipsternp vtsdafkrsl refklpkeni klkvyytrir
//
LOCUS       WP_235941618             203 aa            linear   BCT 02-MAR-2025
DEFINITION  SRPBCC domain-containing protein [Paenibacillus puerhi].
ACCESSION   WP_235941618
VERSION     WP_235941618.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus puerhi
  ORGANISM  Paenibacillus puerhi
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 203)
  AUTHORS   Stark,J.L., Mercier,K.A., Mueller,G.A., Acton,T.B., Xiao,R.,
            Montelione,G.T. and Powers,R.
  TITLE     Solution structure and function of YndB, an AHSA1 protein from
            Bacillus subtilis
  JOURNAL   Proteins 78 (16), 3328-3340 (2010)
   PUBMED   20818668
REFERENCE   2  (residues 1 to 203)
  AUTHORS   Lotz,G.P., Lin,H., Harst,A. and Obermann,W.M.
  TITLE     Aha1 binds to the middle domain of Hsp90, contributes to client
            protein activation, and stimulates the ATPase activity of the
            molecular chaperone
  JOURNAL   J Biol Chem 278 (19), 17228-17235 (2003)
   PUBMED   12604615
REFERENCE   3  (residues 1 to 203)
  AUTHORS   Panaretou,B., Siligardi,G., Meyer,P., Maloney,A., Sullivan,J.K.,
            Singh,S., Millson,S.H., Clarke,P.A., Naaby-Hansen,S., Stein,R.,
            Cramer,R., Mollapour,M., Workman,P., Piper,P.W., Pearl,L.H. and
            Prodromou,C.
  TITLE     Activation of the ATPase activity of hsp90 by the stress-regulated
            cochaperone aha1
  JOURNAL   Mol Cell 10 (6), 1307-1318 (2002)
   PUBMED   12504007
REFERENCE   4  (residues 1 to 203)
  AUTHORS   Sevier,C.S. and Machamer,C.E.
  TITLE     p38: A novel protein that associates with the vesicular stomatitis
            virus glycoprotein
  JOURNAL   Biochem Biophys Res Commun 287 (2), 574-582 (2001)
   PUBMED   11554768
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08327.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Paenibacillus puerhi"
                     /db_xref="taxon:2692622"
     Protein         1..203
                     /product="SRPBCC domain-containing protein"
                     /calculated_mol_wt=23556
     Region          88..195
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
ORIGIN      
        1 mpgqvfrrdi eretgapweq wlqwleedaa qrysydeltg ylqevrgagl rwapiiadmy
       61 rqqqghkpvg qtiavgfnig vrktaalsre qlwhylispd glklwigeve pfnleagtvf
      121 eskegvsgkl svvkpyeklr lswqrpdweh pstlqiyllp tktgkttisf nqeklddlym
      181 rhimkrhwee aaermlqeag qtr
//
LOCUS       WP_235941652             938 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase [Cyclobacterium roseum].
ACCESSION   WP_235941652
VERSION     WP_235941652.1
KEYWORDS    RefSeq.
SOURCE      Cyclobacterium roseum
  ORGANISM  Cyclobacterium roseum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Cyclobacterium.
REFERENCE   1  (residues 1 to 938)
  AUTHORS   Miyata,T., Kashige,N., Satho,T., Yamaguchi,T., Aso,Y. and Miake,F.
  TITLE     Cloning, sequence analysis, and expression of the gene encoding
            Sphingomonas paucimobilis FP2001 alpha-L -rhamnosidase
  JOURNAL   Curr Microbiol 51 (2), 105-109 (2005)
   PUBMED   15991055
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17132.9
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..938
                     /organism="Cyclobacterium roseum"
                     /db_xref="taxon:2666137"
     Protein         1..938
                     /product="glycosyl hydrolase"
                     /calculated_mol_wt=105707
     Region          <191..726
                     /region_name="Glyco_hydro_106"
                     /note="alpha-L-rhamnosidase; pfam17132"
                     /db_xref="CDD:435739"
     Region          813..>884
                     /region_name="LacZ"
                     /note="Beta-galactosidase/beta-glucuronidase [Carbohydrate
                     transport and metabolism]; COG3250"
                     /db_xref="CDD:442481"
ORIGIN      
        1 mmkryktlql slyslfflaf lfghagcqqe epftpivkag ewpevtrsak pwtrwwwmgn
       61 avdeknltnl lqsyeaaglg gleiapiyga kgfedrflty lspewmemlh htvakadsln
      121 mgidltqgtg wpfggpmvqp emaaqrmviq qhtysgqegl drpillestr atrfeyglht
      181 vmafkenetp vnltsqidds gelswdasgk welvavfmaq tgqmvkraap ggqgftldhy
      241 skesvndyls hfeeafkedf pgirafynds fevygadfte nffqffqekr gydlrnhlpe
      301 llaeepders arlksdyret indmllenft gqwtdwanrq gkltknqahg spgnlldlya
      361 rvdipegetf gssyfpipgi rrdsadirnv dpdpimlkfa ssaahltgkn lvstetftwl
      421 gehfksafsq akpeleqafl aginhmfyhg vtyspeevdf pgwlfyasln lnthnslwph
      481 frgfneyiqr vqsvlqsgtp dnellmywpv ydvwadpegl skmltvhgid ewlhptpfyk
      541 gskmlmekgf gldfvsddli gdlqvsdghl ssangtysaq vlvvpkltym pvatlerils
      601 laekgakvvf qqvptevpgf ndftsrkeal nslweslafe atagsqlakv gsgqvilsed
      661 llqamelagl eretlvdegl qyirrnlkge ryyylvnhsa eavnsyiplk yganeavlmd
      721 peigkvglaq nrgekgefev rvnldpgksl ivhllqqdse gisewkyshs epdlipvegp
      781 wtltftaggp tlpeaqqlee vqpwtklene evlhfsgqal yetkldlnls qgakyvlnlg
      841 kvlesarvwi ngqevgfafg ipfkldvsdy lqngtneiki evanlmanri ryldqqgvtw
      901 rnyheinfvn idygpfdasg wdimpsglag pvnieihp
//
LOCUS       WP_235941656             479 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Paenibacillus puerhi].
ACCESSION   WP_235941656
VERSION     WP_235941656.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus puerhi
  ORGANISM  Paenibacillus puerhi
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 479)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 479)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 479)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 479)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Paenibacillus puerhi"
                     /db_xref="taxon:2692622"
     Protein         1..479
                     /product="ATP-binding protein"
                     /calculated_mol_wt=53908
     Region          54..208
                     /region_name="MEDS"
                     /note="MEthanogen/methylotroph, DcmR Sensory domain;
                     pfam14417"
                     /db_xref="CDD:433946"
     Region          238..467
                     /region_name="KdpD"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; COG2205"
                     /db_xref="CDD:441807"
ORIGIN      
        1 miilvalmsn heirckllvr lgtaegnehi ggtrmapqts ipltnkiqvp sgshilyffs
       61 dydkyidnav sfirsgmelg qpviiidtpe ingaverkll memdegpwrd rvhymnradf
      121 qendeevnlq allspilglm epaeehdtgi rvwgrlsrnp hderpdgscs craecgavld
      181 errflsvcay dahavtaalq lkalqthpyl mtddvlvlss lyphkareea dspvlsaqqd
      241 lesqmdlykq kldfahvvsh evrnpltvik aystllmnkv kdpedkdklk aicdyvvlid
      301 neishiiste qmlstdalwr rkltvpkall levmeimdvk artqniqfhp siqlggderl
      361 lsnatgfkli vsniisnaik yseegrpvyf kayceegqlv letedfgvgm nesqlqrlfq
      421 kyektndqkg gqgiglfmvk qlvehhqgqi evisrlgvgt kmtvrlpmne lsaeesaml
//
LOCUS       WP_235941745             339 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Paenibacillus puerhi].
ACCESSION   WP_235941745
VERSION     WP_235941745.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus puerhi
  ORGANISM  Paenibacillus puerhi
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 339)
  AUTHORS   Davies,D.R., Mahnke Braam,L., Reznikoff,W.S. and Rayment,I.
  TITLE     The three-dimensional structure of a Tn5 transposase-related
            protein determined to 2.9-A resolution
  JOURNAL   J Biol Chem 274 (17), 11904-11913 (1999)
   PUBMED   10207011
REFERENCE   2  (residues 1 to 339)
  AUTHORS   DasSarma,S.
  TITLE     Identification and analysis of the gas vesicle gene cluster on an
            unstable plasmid of Halobacterium halobium
  JOURNAL   Experientia 49 (6-7), 482-486 (1993)
   PUBMED   8335077
REFERENCE   3  (residues 1 to 339)
  AUTHORS   Ferrante,A.A. and Lessie,T.G.
  TITLE     Nucleotide sequence of IS402 from Pseudomonas cepacia
  JOURNAL   Gene 102 (1), 143-144 (1991)
   PUBMED   1650732
REFERENCE   4  (residues 1 to 339)
  AUTHORS   De Meirsman,C., Van Soom,C., Verreth,C., Van Gool,A. and
            Vanderleyden,J.
  TITLE     Nucleotide sequence analysis of IS427 and its target sites in
            Agrobacterium tumefaciens T37
  JOURNAL   Plasmid 24 (3), 227-234 (1990)
   PUBMED   1963949
REFERENCE   5  (residues 1 to 339)
  AUTHORS   Sato,S., Nakada,Y. and Shiratsuchi,A.
  TITLE     IS421, a new insertion sequence in Escherichia coli
  JOURNAL   FEBS Lett 249 (1), 21-26 (1989)
   PUBMED   2542093
REFERENCE   6  (residues 1 to 339)
  AUTHORS   Kroger,M. and Hobom,G.
  TITLE     Structural analysis of insertion sequence IS5
  JOURNAL   Nature 297 (5862), 159-162 (1982)
   PUBMED   6281654
REFERENCE   7  (residues 1 to 339)
  AUTHORS   Klaer,R., Kuhn,S., Tillmann,E., Fritz,H.J. and Starlinger,P.
  TITLE     The sequence of IS4
  JOURNAL   Mol Gen Genet 181 (2), 169-175 (1981)
   PUBMED   6268937
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01609.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Paenibacillus puerhi"
                     /db_xref="taxon:2692622"
     Protein         1..339
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=39526
     Region          <24..237
                     /region_name="transpos_IS701"
                     /note="IS701 family transposase; NF033540"
                     /db_xref="CDD:468071"
ORIGIN      
        1 mnvvviqavl ksgleyplfy rvwhqpaikg egltkidfak qmllmlrest acrlwvamdr
       61 rylckeffaf levhgfdwvt kakrntalfr kviepltgre ryvpltpvml irevfttltr
      121 gasqglvsma ipdiymkqry vqvaavavmr lkdneecdln asedeapaty rgayllisnr
      181 fdapeealqt yvkrwrievf frtakqelaf eschseseth hhahfellft aetllavalf
      241 elnkektsdd ggythgemvr glfhtrcqvr avnhkgnrri sidcdtnvrk farlielfwp
      301 ehylmllwit prpdiyqclp rsayvmfyll ylqnytnni
//
LOCUS       WP_235941783             311 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleoside hydrolase [Paenibacillus puerhi].
ACCESSION   WP_235941783
VERSION     WP_235941783.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus puerhi
  ORGANISM  Paenibacillus puerhi
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 311)
  AUTHORS   Degano,M., Gopaul,D.N., Scapin,G., Schramm,V.L. and
            Sacchettini,J.C.
  TITLE     Three-dimensional structure of the inosine-uridine nucleoside
            N-ribohydrolase from Crithidia fasciculata
  JOURNAL   Biochemistry 35 (19), 5971-5981 (1996)
   PUBMED   8634238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01156.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Paenibacillus puerhi"
                     /db_xref="taxon:2692622"
     Protein         1..311
                     /product="nucleoside hydrolase"
                     /GO_function="GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA]"
                     /calculated_mol_wt=34828
     Region          14..257
                     /region_name="URH1"
                     /note="Inosine-uridine nucleoside N-ribohydrolase
                     [Nucleotide transport and metabolism]; COG1957"
                     /db_xref="CDD:441560"
ORIGIN      
        1 mginmpyevp etkkirliin tdakneaddq faivhalltp rfkikgiiga qfeeteqrfm
       61 krmigttmqe scneveklls lmdlqgqvpv yrgaakalnd ertpersega eaiirealad
      121 daaplyvvfl gpltdlaaay llepaiagrl taiwiggghw pkggweynlm ndihaanvvf
      181 ssgidlwqvp htvyttirvs laelahrvkp cgelgsylfq qlvdfndwag rafpdapwpk
      241 geswslgdsp aislllddhe ygyelkpapq itedmyyvhn qsdrmirvyh hvdarytled
      301 mfaklalysg l
//
LOCUS       WP_235941796             208 aa            linear   BCT 02-MAR-2025
DEFINITION  linear amide C-N hydrolase [Cyclobacterium roseum].
ACCESSION   WP_235941796
VERSION     WP_235941796.1
KEYWORDS    RefSeq.
SOURCE      Cyclobacterium roseum
  ORGANISM  Cyclobacterium roseum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Cyclobacterium.
REFERENCE   1  (residues 1 to 208)
  AUTHORS   Coleman,J.P. and Hudson,L.L.
  TITLE     Cloning and characterization of a conjugated bile acid hydrolase
            gene from Clostridium perfringens
  JOURNAL   Appl Environ Microbiol 61 (7), 2514-2520 (1995)
   PUBMED   7618863
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014345.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02275.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Cyclobacterium roseum"
                     /db_xref="taxon:2666137"
     Protein         1..208
                     /product="linear amide C-N hydrolase"
                     /calculated_mol_wt=22816
     Region          <60..197
                     /region_name="YxeI"
                     /note="Penicillin V acylase or related amidase, Ntn
                     superfamily [Cell wall/membrane/envelope biogenesis,
                     General function prediction only]; COG3049"
                     /db_xref="CDD:442283"
ORIGIN      
        1 maisplegea laavgeevsv asgaaaleav arvvagklei dilaifirrk gelrgismld
       61 ppyeqqlaig kywenipgkt flpgsvtssd rfvrasffln sipqtdntrv avasvfsvir
      121 nvsvpygfei egypnlsttr wrmvadqknl vyyfetaltp nafwvdlkki dfsekaavrk
      181 ldlanhrtys getsgdfkks apfrfigl
//
LOCUS       WP_235941801             499 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Paenibacillus puerhi].
ACCESSION   WP_235941801
VERSION     WP_235941801.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus puerhi
  ORGANISM  Paenibacillus puerhi
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 499)
  AUTHORS   Davies,D.R., Mahnke Braam,L., Reznikoff,W.S. and Rayment,I.
  TITLE     The three-dimensional structure of a Tn5 transposase-related
            protein determined to 2.9-A resolution
  JOURNAL   J Biol Chem 274 (17), 11904-11913 (1999)
   PUBMED   10207011
REFERENCE   2  (residues 1 to 499)
  AUTHORS   DasSarma,S.
  TITLE     Identification and analysis of the gas vesicle gene cluster on an
            unstable plasmid of Halobacterium halobium
  JOURNAL   Experientia 49 (6-7), 482-486 (1993)
   PUBMED   8335077
REFERENCE   3  (residues 1 to 499)
  AUTHORS   Ferrante,A.A. and Lessie,T.G.
  TITLE     Nucleotide sequence of IS402 from Pseudomonas cepacia
  JOURNAL   Gene 102 (1), 143-144 (1991)
   PUBMED   1650732
REFERENCE   4  (residues 1 to 499)
  AUTHORS   De Meirsman,C., Van Soom,C., Verreth,C., Van Gool,A. and
            Vanderleyden,J.
  TITLE     Nucleotide sequence analysis of IS427 and its target sites in
            Agrobacterium tumefaciens T37
  JOURNAL   Plasmid 24 (3), 227-234 (1990)
   PUBMED   1963949
REFERENCE   5  (residues 1 to 499)
  AUTHORS   Sato,S., Nakada,Y. and Shiratsuchi,A.
  TITLE     IS421, a new insertion sequence in Escherichia coli
  JOURNAL   FEBS Lett 249 (1), 21-26 (1989)
   PUBMED   2542093
REFERENCE   6  (residues 1 to 499)
  AUTHORS   Kroger,M. and Hobom,G.
  TITLE     Structural analysis of insertion sequence IS5
  JOURNAL   Nature 297 (5862), 159-162 (1982)
   PUBMED   6281654
REFERENCE   7  (residues 1 to 499)
  AUTHORS   Klaer,R., Kuhn,S., Tillmann,E., Fritz,H.J. and Starlinger,P.
  TITLE     The sequence of IS4
  JOURNAL   Mol Gen Genet 181 (2), 169-175 (1981)
   PUBMED   6268937
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01609.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Paenibacillus puerhi"
                     /db_xref="taxon:2692622"
     Protein         1..499
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=57618
     Region          56..413
                     /region_name="transpos_IS701"
                     /note="IS701 family transposase; NF033540"
                     /db_xref="CDD:468071"
ORIGIN      
        1 msalqkprfl dlqhgecaga pilkslwdrf dfsllltqsg mmkrsgtpsw licflyvigl
       61 vsncssvvqm aqladkdall kemfhpwkla qytmsrflsn phawttfgkk rvarlqqdel
      121 irledgdvin lddthlahpy akqlpflawl fdsskkayvw amnvvviqav lksgleyplf
      181 yrvwhqpaik gegltkidla kqmllllrks tacrlwvamd rwylckeffa flevhgfdwv
      241 tkakrntalf rkviepltgr eryvpltpvm lirevfttlt rgasqglvsm aipdiymkqp
      301 ftltsrkgkq vtkqryvqva avavirlkdn eecdlnaaed eapatyrgay llisnrfdap
      361 eealqtyvkr wrievffrta kqelafesch sesethhhah fellftaetl lavalfelnk
      421 ektsddegyt hgemvrglfh trcqvravnh kgnrrisidc dtnvrrfarl ielfwpehyl
      481 mllwvtprpd iyqclprga
//
LOCUS       WP_235941815             378 aa            linear   BCT 02-MAR-2025
DEFINITION  RagB/SusD family nutrient uptake outer membrane protein
            [Cyclobacterium roseum].
ACCESSION   WP_235941815
VERSION     WP_235941815.1
KEYWORDS    RefSeq.
SOURCE      Cyclobacterium roseum
  ORGANISM  Cyclobacterium roseum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Cyclobacterium.
REFERENCE   1  (residues 1 to 378)
  AUTHORS   Goulas,T., Garcia-Ferrer,I., Hutcherson,J.A., Potempa,B.A.,
            Potempa,J., Scott,D.A. and Gomis-Ruth,F.X.
  TITLE     Structure of RagB, a major immunodominant outer-membrane surface
            receptor antigen of Porphyromonas gingivalis
  JOURNAL   Mol Oral Microbiol 31 (6), 472-485 (2016)
   PUBMED   26441291
REFERENCE   2  (residues 1 to 378)
  AUTHORS   Bolam,D.N. and Koropatkin,N.M.
  TITLE     Glycan recognition by the Bacteroidetes Sus-like systems
  JOURNAL   Curr Opin Struct Biol 22 (5), 563-569 (2012)
   PUBMED   22819666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07980.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Cyclobacterium roseum"
                     /db_xref="taxon:2666137"
     Protein         1..378
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /calculated_mol_wt=42989
     Region          151..378
                     /region_name="SusD_RagB"
                     /note="SusD family; pfam07980"
                     /db_xref="CDD:429768"
ORIGIN      
        1 mnkfaveall arlylnaavy rdpygtpdfr sedldkviqy ttniingpys lspeyfdlfn
       61 ddndtnpeii fsldqrgvlq tehsrwqyws isgdltprpe fpnsrgtdav aatpdfiqtw
      121 ydaygevdpa eadarffqen tlipenlrdl sdvnptndad hyycvdaeaf einrgflrgi
      181 iwgprkddsg niltcedgki riypvinrrs sgadiryvdh tfqvdfsseg slhntghrfs
      241 kyqfsrtapn cctnssvdiv lirlgeiylm raeaqlrkgd nagaladvnt lrtsrnarpa
      301 qtpaplnaid mdilfresgf elyweglrrv yqirygkyed nwtgktdsdp nkrlfpipqr
      361 aidgasneeg flvqnpgy
//
LOCUS       WP_235941825             412 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Cyclobacterium roseum].
ACCESSION   WP_235941825
VERSION     WP_235941825.1
KEYWORDS    RefSeq.
SOURCE      Cyclobacterium roseum
  ORGANISM  Cyclobacterium roseum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Cyclobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Cyclobacterium roseum"
                     /db_xref="taxon:2666137"
     Protein         1..412
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=47314
     Region          <193..398
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 msnfsinefk qlpivmtsms rwdgdfssas wslaktfaqn qiviyvdypf tlidfirerk
       61 kkhlkaripa llygkncltp lteyhtnlfa ltpplmlpin wlppgklyrl lagwnnrrls
      121 ksiqkgllkl nitdyiffns fnplylsslp kgftpkafvy qsrdnirale pylrkhgsyl
      181 eieavknarl slatsrllqk dleqlsgenv ayfpnaadfn lfksafedei plpeelktlp
      241 rpiigytgni chridyellk gicennpeks lvmvgprnhw ghtdvdldkl pnlhftgpkk
      301 ieqlpsylah fdvlilpflc nevtrsiypl kineylasgk pivatpfsed iqsfsplirl
      361 ekdaqafsrt iteelesntp qkglqryqea skntwegrvt lfwklinqtf sl
//
LOCUS       WP_235941834             947 aa            linear   BCT 02-MAR-2025
DEFINITION  triple tyrosine motif-containing protein [Cyclobacterium roseum].
ACCESSION   WP_235941834
VERSION     WP_235941834.1
KEYWORDS    RefSeq.
SOURCE      Cyclobacterium roseum
  ORGANISM  Cyclobacterium roseum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Cyclobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019136.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07495.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..947
                     /organism="Cyclobacterium roseum"
                     /db_xref="taxon:2666137"
     Protein         1..947
                     /product="triple tyrosine motif-containing protein"
                     /calculated_mol_wt=108146
     Region          28..923
                     /region_name="COG3292"
                     /note="Periplasmic ligand-binding sensor domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:442521"
ORIGIN      
        1 mkyllsllil lagvkmaqsq smgipfsryy ssqeyqggiq nyaitqhasg ilyvannygl
       61 lihdgttwrr qslpnstkir hvavnekgmv yasgqgefgi fmpdklgrlq fhslkdslpe
      121 nlrdldevwk vylgeenlyf ctsnsifvyt tdhefdysle ssegfesfhf hnnslivner
      181 gtgllqiqng sfsplnpffs dklvtgllpa gpdrflvftr dngiftssgk stenwpggqn
      241 ltinaalrlk dgtiavatql dglllldpag termkmdrqn glnnnsvvsl fedlsgnlwl
      301 ghnnglsliq lslpfskinh fsgltgtgyh atfhegnfyf gtnngvyvre aattnsmewl
      361 pnstgqvhqi kpiqdrilia hndgafvlqd gvsrqigape giwnfqplrn hpelilsggy
      421 fglhlfeire dsirylrkie gfnessrive qddqgniwva hgykglyklq ldetletaev
      481 syfgseqglp tdilnnvwki nnrlvvttqa gifrynesrn sferdsffst yfeegslihy
      541 laedqmgniy figetetgvl ekevdgsysk qfqvfnpllp llnddlqnis vmrgnevlfa
      601 anegfirfsl ndnafdppvf ptliraaylt gaadslifag ntgeqlplps iripykqani
      661 rfessnptpn nekdlryqyw legfedgfgq wvarrekayt nlregsytfh vrsknlygvv
      721 speatfsfei lppwyrsqta yliyltllil saflvyrlve kryqkktlql ktdsqkviea
      781 keselkvsrk everlkterl kqeiqikdke laaatmhlin kngfidqmrn nlnsitkksk
      841 nqevkneiqk viktieknia edqdweqfei hfdqvhgdfm arfkkeydnl spqeiklsay
      901 lrmnlstkei aylmnisvrg veiaryrlrk klqlersdnl qeyilkf
//
LOCUS       WP_235941844            1787 aa            linear   BCT 02-MAR-2025
DEFINITION  MBG domain-containing protein, partial [Cyclobacterium roseum].
ACCESSION   WP_235941844
VERSION     WP_235941844.1
KEYWORDS    RefSeq.
SOURCE      Cyclobacterium roseum
  ORGANISM  Cyclobacterium roseum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Cyclobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037085.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18676.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..1787
                     /organism="Cyclobacterium roseum"
                     /db_xref="taxon:2666137"
     Protein         1..>1787
                     /product="MBG domain-containing protein"
     Region          23..1551
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          1388..1461
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          1475..1540
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          1546..1619
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          1625..1698
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          1704..1777
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
ORIGIN      
        1 mklflknsll iallllsylp vkaqtttvtf neitnylgtf getydngglr fsvtkepnat
       61 lnsgikaten dgflgsvaln dsnlapngik qwsirksdgs sfqfisiflq eggvgastsg
      121 tisafkggsq vgssksidfn sasnglktfd ndpdfydvde irinaddiyf fldhvstgpp
      181 fspldedppv vtgislngvp attaesvtft vnfsktalnv slddflltta gttaslaais
      241 gtgnsyqvtv daisgegsir ldlkggtdit nedntsgvpa fssggthmvs acftenmens
      301 pdasssfssn glsfslstgl eteqrlgfga gnsdgfiknn ntagsfsiss sepftmntvd
      361 lflsdlsngd nptgngtltv tgknngntif tiiktsgfpv nttqnggfft ldfstdgpqn
      421 frnanvdeve fsiadgflel lidnfnfcee vpdtdtaapa vqrilldgsp nstassivya
      481 ivfdedafnl slddfslvtt gtatgtitqi sgsgstyqae itgisgegtl qlqlkggtdi
      541 adalgntspl eyvngqihlv gscssesfed esdgassfsg ngkdfslsgs wavkhrvgfg
      601 angsakyles sgsgpytlqv sgtpvavski glylssfasg vsptddgslt itgkrdgntl
      661 ytvektsgfp sdfggtggff tldfatdgls dysavlvdel vletggafsy laldnfdfcv
      721 dnsapsgysv tidqnvidea nqdqvgftfa gaelestytf sfnssgggaa itgsgtilst
      781 tqqvtgidls svpnglitlt valtdisgnq gpevtaqvdk fintipevgp dlytaptyee
      841 naanllilen ievsdadgde lvraiirfeg sgkisgdels lgdpspftfq evdvntlelt
      901 gtatatvltd ilrglafrst sedptlggte teriisiiie denggfsipa ngthnvrlpi
      961 eavndapels lpsnqevlsn qpltwssagg neitvsdpda gsnallvels vtngsldlat
     1021 ttglsfnlgt gagnssmqfs gdltainnal dgleftstts fvgeavltme indqgntgtg
     1081 gslsangtls iqvnapnapp vasgvsasgt tavgesltga ytytdtenda esgtsfqwwi
     1141 addavgsnet aisgesgqdl tlltdylghf isfevtpsdg nnfgapvksg yigpvftlpq
     1201 vsttdpagil fnaatlggev eneqfsdvae sgivlntsgs pdltdqkvnm gsgpgtfsas
     1261 vsnlapntty yvrafatnaa gtafgqqasf ttekqtltlg gsfqvenkty dgtsqavilt
     1321 ddlellspqp gdevmvsdlv lafadsqsgt dkpvsivsav lsgadaenyt ltitaapsgi
     1381 asifpksltv sategiakty gtldpaftft ssgfvngede tlftgalgre pgenvgtyai
     1441 tqgdltasan ytldftaadf tinpktlvlt tdagqsktyg qadpvftftt ngfvngddes
     1501 litgslnrep genvgayain qgdvstgany tldftaadft inpqtlvlta dpgqsksygq
     1561 tdpvftftss gfvngddesl lsgalnrepg envgtyaitq gdvtaganyt ldftaadfti
     1621 spqtlvltad pghskiygqa dpvftftssg fvngedesli tgalnrepge nvgtyaitqg
     1681 dvtaganytl nftaadftin pqtlvltadp gqsktygqtd pvftftssgf vngddesllt
     1741 gilnrepgen vgayaitqed vnaganyild ftaadftisp qtlvlta
//
LOCUS       WP_235941853             358 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6340 family protein [Cyclobacterium roseum].
ACCESSION   WP_235941853
VERSION     WP_235941853.1
KEYWORDS    RefSeq.
SOURCE      Cyclobacterium roseum
  ORGANISM  Cyclobacterium roseum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Cyclobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040069.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19867.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Cyclobacterium roseum"
                     /db_xref="taxon:2666137"
     Protein         1..358
                     /product="DUF6340 family protein"
                     /calculated_mol_wt=39532
     Region          44..310
                     /region_name="DUF6340"
                     /note="Family of unknown function (DUF6340); pfam19867"
                     /db_xref="CDD:466214"
ORIGIN      
        1 meastkwisg nsvffilffl lvsctknvsl trlmpaeipv pnhvqrlllv drtvpesqgv
       61 aiiegiltge apfeirnaid atmatiqqel atspryeiir agerlkgglf gqvfpeplsw
      121 dqidylcdky qadgvltlek fdsdfvvtek kvnlkkqvgs gneertievp gilaeglasv
      181 qvgfrlydpa sgtlvdqadf sktntwsaea esktqalall idkvqatryv gqlagaayar
      241 rvapmyvain rsyygkskdn palevgarya eidqweeail awkdglsqps dakthgkicy
      301 nlalayevlg dlplakewag kaytqfafkg grsyareldq rmmeedqlrq qlaspate
//
LOCUS       WP_235941944             334 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase [Pontibacter fetidus].
ACCESSION   WP_235941944
VERSION     WP_235941944.1
KEYWORDS    RefSeq.
SOURCE      Pontibacter fetidus
  ORGANISM  Pontibacter fetidus
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Pontibacter.
REFERENCE   1  (residues 1 to 334)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Pontibacter fetidus"
                     /db_xref="taxon:2700082"
     Protein         1..334
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=36492
     Region          25..>254
                     /region_name="AtaC"
                     /note="c-di-AMP phosphodiesterase AtaC or nucleotide
                     pyrophosphatase, AlkP superfamily [Signal transduction
                     mechanisms]; COG1524"
                     /db_xref="CDD:441133"
     Region          <216..>309
                     /region_name="AslA"
                     /note="Arylsulfatase A or related enzyme, AlkP superfamily
                     [Inorganic ion transport and metabolism]; COG3119"
                     /db_xref="CDD:442353"
ORIGIN      
        1 mkatmpdakt iglsllfrql avavivgsll llqgcaatgg kglrtknvii vvidgvrase
       61 twdsipgaip nmatnlkskg vffsdfqnda ytytnaghta ittgvnqpid nygaelpahp
      121 sifqqwlkqt gkpttaawii sskdklnila ntkdtvwqnt ympslncgin gpgtgyrads
      181 ltfevvkqvl ttnkpnlvli nfmepdgyah aanwnyylrg ikrddsyvqq lydflkkdkn
      241 yrkntallvt tdhgrhlqgi dggwidhgdd cpgcrkifll algpdfktgt vtskhtlvdi
      301 satvakmlgf tfeqsqgqvm kelfpakklr amgl
//
LOCUS       WP_235942013            1099 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Pontibacter fetidus].
ACCESSION   WP_235942013
VERSION     WP_235942013.1
KEYWORDS    RefSeq.
SOURCE      Pontibacter fetidus
  ORGANISM  Pontibacter fetidus
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Pontibacter.
REFERENCE   1  (residues 1 to 1099)
  AUTHORS   Gao,G., Nara,T., Nakajima-Shimada,J. and Aoki,T.
  TITLE     Novel organization and sequences of five genes encoding all six
            enzymes for de novo pyrimidine biosynthesis in Trypanosoma cruzi
  JOURNAL   J Mol Biol 285 (1), 149-161 (1999)
   PUBMED   9878395
REFERENCE   2  (residues 1 to 1099)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
REFERENCE   3  (residues 1 to 1099)
  AUTHORS   Nygaard,P., Duckert,P. and Saxild,H.H.
  TITLE     Role of adenine deaminase in purine salvage and nitrogen metabolism
            and characterization of the ade gene in Bacillus subtilis
  JOURNAL   J Bacteriol 178 (3), 846-853 (1996)
   PUBMED   8550522
REFERENCE   4  (residues 1 to 1099)
  AUTHORS   Lollier,M., Jaquet,L., Nedeva,T., Lacroute,F., Potier,S. and
            Souciet,J.L.
  TITLE     As in Saccharomyces cerevisiae, aspartate transcarbamoylase is
            assembled on a multifunctional protein including a
            dihydroorotase-like cryptic domain in Schizosaccharomyces pombe
  JOURNAL   Curr Genet 28 (2), 138-149 (1995)
   PUBMED   8590465
REFERENCE   5  (residues 1 to 1099)
  AUTHORS   Jabri,E., Carr,M.B., Hausinger,R.P. and Karplus,P.A.
  TITLE     The crystal structure of urease from Klebsiella aerogenes
  JOURNAL   Science 268 (5213), 998-1004 (1995)
   PUBMED   7754395
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01979.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Pontibacter fetidus"
                     /db_xref="taxon:2700082"
     Protein         1..1099
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=121600
     Region          63..>524
                     /region_name="COG4946"
                     /note="Uncharacterized N-terminal domain of tricorn
                     protease, contains WD40 repeats [Function unknown]"
                     /db_xref="CDD:443973"
     Region          655..1051
                     /region_name="HutI"
                     /note="Imidazolonepropionase or related amidohydrolase
                     [Secondary metabolites biosynthesis, transport and
                     catabolism]; COG1228"
                     /db_xref="CDD:440841"
ORIGIN      
        1 mnkrtylsmf laaalalpcs talaqdkkdd kkwkvdaahg tekevtvttd egtwmsldvs
       61 pdgkeivfdm lgdiysmpis ggkakllrsg rayevqprfs pdgkfisfts dagggdniwi
      121 mkrdgsgaeq itketfrlln navwtpdgqy liarkhftnt rslgagemwm yhrtggagiq
      181 ltkrkndqqd agepfvspdg kyvyysedms ggstfeynkd pngqiyvirr vdrntgeien
      241 ivtgnggsvr ptisrdgkhi afvrrvrtks vlfvqdlktg eqwpltdnls kdqqeawaif
      301 gvypsfawtp dnksivywan gkinkidvan qkvtnipfea tathyvsdav rhdfsknggv
      361 spkeftakai rhavtspdgk ilvfnaaghi ykkelpngkp eritkdadfe fypsfspdgk
      421 yivystwndd nysalmkldi rkknakptkl tsekgfytna sfspngkfiv ynkeggnnhm
      481 gyahgnergi yymtaegknp tfvqkngssp lfnaasdrif ftanagdkaa fksvnlqgke
      541 eqthytskyt dqfypspdnk wiafvelfng yvapfstngs gldlsaetka vpvarftrda
      601 gtsihwsgds kkvnwvlgde yfsndiknrf sfvegapekl paidttgmki glelktdtpe
      661 gkvaftnari itmkgdevie ggtivvdgnr ivavgkgvai pkdakvidaa gktimpglvd
      721 vhahlgtfrn gmspqkqwsy ytnlaygvtt thdpssttem vfsqseavka gamvgpriys
      781 tgtilygadg nfkavvnsld darshlrrlk aiggfsvksy nqprreqrqq iiqaareldm
      841 tvvpeggstf fhnmsmildg htgiehnipv aplykdvvev wkasqtgytp tlivnyagss
      901 geyywyqktn awekerllkf tprsvvdgrs rrvtlvpdde yknghiltse saktltdagv
      961 kvnlgahgql qglgahwelw mlqqggmtnh ealraatlng aeylgmgkdi gsleagklad
     1021 livldknple niqnsehvky tmvngrlyda atmaetgnyn kqpgkfwwen srtatafdwh
     1081 egtdtrfegi agehctcrh
//
LOCUS       WP_235942095             353 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4097 family beta strand repeat-containing protein [Pontibacter
            fetidus].
ACCESSION   WP_235942095
VERSION     WP_235942095.1
KEYWORDS    RefSeq.
SOURCE      Pontibacter fetidus
  ORGANISM  Pontibacter fetidus
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Pontibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024743.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13349.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Pontibacter fetidus"
                     /db_xref="taxon:2700082"
     Protein         1..353
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /calculated_mol_wt=38791
     Region          128..349
                     /region_name="DUF4097"
                     /note="Putative adhesin; pfam13349"
                     /db_xref="CDD:433135"
ORIGIN      
        1 myrslrylav mfvmapamvl grqapqspsq ptppaapcpn tamaivmpdi kihiqpsagv
       61 kfdaekrktf ektykvnssd vlnidnrygr vhvntwnkne ikvkvdmiar agsdskasdm
      121 lsrmniadgk egnvitvrtv yepsrvsgps sseinytifm peanaitlkn kygdvylaal
      181 kgkvdvdvky gnlkcdrlsn anntlklayg sgscgyingg avqiayfdmn vaeakelkgf
      241 skyseltigk lgeelnmdmk ygsfrvnnis nnvrnirlas tyipislnfd dnsafnfnvn
      301 vqygdfkvsk dlvnmttvek dytsadykgk fgsaaskaav sitskygdvr ftq
//
LOCUS       WP_235942117             222 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxypeptidase-like regulatory domain-containing protein
            [Pontibacter fetidus].
ACCESSION   WP_235942117
VERSION     WP_235942117.1
KEYWORDS    RefSeq.
SOURCE      Pontibacter fetidus
  ORGANISM  Pontibacter fetidus
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Pontibacter.
REFERENCE   1  (residues 1 to 222)
  AUTHORS   Cho,K.H. and Salyers,A.A.
  TITLE     Biochemical analysis of interactions between outer membrane
            proteins that contribute to starch utilization by Bacteroides
            thetaiotaomicron
  JOURNAL   J Bacteriol 183 (24), 7224-7230 (2001)
   PUBMED   11717282
REFERENCE   2  (residues 1 to 222)
  AUTHORS   Shipman,J.A., Berleman,J.E. and Salyers,A.A.
  TITLE     Characterization of four outer membrane proteins involved in
            binding starch to the cell surface of Bacteroides thetaiotaomicron
  JOURNAL   J Bacteriol 182 (19), 5365-5372 (2000)
   PUBMED   10986238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025092.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13715.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Pontibacter fetidus"
                     /db_xref="taxon:2700082"
     Protein         1..222
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /calculated_mol_wt=24627
     Region          46..132
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
ORIGIN      
        1 mkpitkaias hvklyrivai tlfmmfafaa kphqakaqgg qrvvqlsgfv tigdslygvs
       61 svsvfvpktg rgvqtnrygf fslpvltgdt vvfsalgykk qtlviprnyp sssysiimqm
      121 qeeaielaev kvipwaterd fkeavlalkl pdegrtaank nvdperlrel fsvvpmdgna
      181 nskvynqhqq iqsqnrylip tispfavlkl ldmlkngefk kk
//
LOCUS       WP_235942217              69 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6132 family protein [Aquirufa beregesia].
ACCESSION   WP_235942217
VERSION     WP_235942217.1
KEYWORDS    RefSeq.
SOURCE      Aquirufa beregesia
  ORGANISM  Aquirufa beregesia
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Flectobacillaceae; Aquirufa.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039355.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19628.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Aquirufa beregesia"
                     /db_xref="taxon:2516556"
     Protein         1..69
                     /product="DUF6132 family protein"
                     /calculated_mol_wt=7516
     Region          12..53
                     /region_name="DUF6132"
                     /note="Family of unknown function (DUF6132); pfam19628"
                     /db_xref="CDD:437460"
ORIGIN      
        1 mkkfiqnhkl aligtflggi agyfywqqig cstgtcplts kplnstlyfa flgyigsgff
       61 ntkkavnrd
//
LOCUS       WP_235942228              66 aa            linear   BCT 02-MAR-2025
DEFINITION  RhuM family protein [Perlabentimonas gracilis].
ACCESSION   WP_235942228
VERSION     WP_235942228.1
KEYWORDS    RefSeq.
SOURCE      Perlabentimonas gracilis
  ORGANISM  Perlabentimonas gracilis
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Tenuifilaceae; Perlabentimonas.
REFERENCE   1  (residues 1 to 66)
  AUTHORS   Amavisit,P., Lightfoot,D., Browning,G.F. and Markham,P.F.
  TITLE     Variation between pathogenic serovars within Salmonella
            pathogenicity islands
  JOURNAL   J Bacteriol 185 (12), 3624-3635 (2003)
   PUBMED   12775700
REFERENCE   2  (residues 1 to 66)
  AUTHORS   Blanc-Potard,A.B., Solomon,F., Kayser,J. and Groisman,E.A.
  TITLE     The SPI-3 pathogenicity island of Salmonella enterica
  JOURNAL   J Bacteriol 181 (3), 998-1004 (1999)
   PUBMED   9922266
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13310.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Perlabentimonas gracilis"
                     /db_xref="taxon:2715279"
     gene            1..66
                     /gene="rhuM"
     Protein         1..66
                     /product="RhuM family protein"
                     /calculated_mol_wt=7345
     Region          <3..42
                     /region_name="Virulence_RhuM"
                     /note="Virulence protein RhuM family; cl19850"
                     /db_xref="CDD:473228"
ORIGIN      
        1 maqlkgkhrr rkvkfynlda iisggyrvns qgatalsiwa tesqyrnkfa aknrngfdis
       61 rdglsi
//
LOCUS       WP_235942329             120 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase family protein [Acinetobacter terrae].
ACCESSION   WP_235942329
VERSION     WP_235942329.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter terrae
  ORGANISM  Acinetobacter terrae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter Taxon 24.
REFERENCE   1  (residues 1 to 120)
  AUTHORS   Kapitonov,V.V. and Jurka,J.
  TITLE     Harbinger transposons and an ancient HARBI1 gene derived from a
            transposase
  JOURNAL   DNA Cell Biol 23 (5), 311-324 (2004)
   PUBMED   15169610
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13359.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Acinetobacter terrae"
                     /db_xref="taxon:2731247"
     Protein         1..120
                     /product="transposase family protein"
                     /calculated_mol_wt=13895
     Region          <5..116
                     /region_name="transpos_IS5_4"
                     /note="IS5 family transposase; NF033581"
                     /db_xref="CDD:468098"
ORIGIN      
        1 mihyrtrqil slctsrgavk rniklipsga liladkgyqd iytfhpnsll plkakrnckl
       61 daelkvynre inkrkigieh vfgmlktfkt laeryrnrak mlglrfnlia eiynmelskk
//
LOCUS       WP_235942357            1205 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Yersinia thracica].
ACCESSION   WP_235942357
VERSION     WP_235942357.1
KEYWORDS    RefSeq.
SOURCE      Yersinia thracica
  ORGANISM  Yersinia thracica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 1205)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Yersinia thracica"
                     /db_xref="taxon:2890319"
     Protein         1..1205
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=135579
     Region          53..1169
                     /region_name="PRK09959"
                     /note="acid-sensing system histidine kinase EvgS"
                     /db_xref="CDD:182169"
ORIGIN      
        1 mliatelvnt mlrplvgfvl lffsllfpla haegngpvtl ellgkhgavt ptiklshsdq
       61 lwlaqkrtlt iavfppelpp lalnsiggry qgmnadylel lqntyninvv ikrysgeqqa
      121 laavksread lmlthlsnye kiippfiasq amvqaypalv tkqdevmkpl htdksvtiai
      181 tnsypseefi rasfphativ sfnsnyqals svadgqndyf igdslsssni imrdfnqvls
      241 ivkfwskpqt ynyfialdnq rqliniinlf lnsvadkish qitlswiedd ylsfltktls
      301 lspkeerwik nnpklqvlin pyyapltmld snlevrglig dilnlihlqt glifepvian
      361 tdseisrtlq ngdwdlqpta tesveledql sfthpylttp fvavvrdspq aiselssgmr
      421 vaipeyhely eklkvkypgi kwvqventgi alnmvedgkl dasiytqisa rymiehyypg
      481 qlkyfsllde epatisfalp cghqelqsil nkaldnispr eigrlsgkwt tmpniqidtw
      541 nlynkqfyvv laltamlifs cllwgryllr eirtrkqsqa eleyqlsfsn tlansiplpn
      601 yvispigtlq nynhaftdff sadlrteirp slfdsrhpla gvfsairrdi enlipdnvil
      661 hplilnngve drhilhwstl cvmpatgsat iiciwqditd skrlmkeiqi ekdkairanr
      721 eksgflasms heirtpisti mgflellatn sqesdkdiel iqlsyssaqs lleligdild
      781 iekiesghfe lspewldlel litsalrsfe glaiqkklkl tfvnrlvkgq hlwldpkalk
      841 qtlvnllsna lkftqqghie vcaetssana nqsqlilsvt dtgsgisqed qqqlfqpfsq
      901 teagkqqvgs glglmicrkl ilqmggdiki askldmgtti timlttdmvr nsiatvttsl
      961 paitapkrik ilisddhsin rlllkrqldt lgyhvdeavd geqalalikq nsydllitdi
     1021 hmpgidgiml arhirnfnnk iviwgltana qaqerercla sgmnlclfkp ltlqklensl
     1081 gtlntlephc qlgefidlem lntltmgdal lirqmleksq qenaqdlkca qeaarlgdwp
     1141 glhhhlhrik gtaqilgase lyrlslrlen hqpmqqqdnm mqadllelek rlktlsdeid
     1201 rfyaa
//
LOCUS       WP_235942404             273 aa            linear   BCT 02-MAR-2025
DEFINITION  Rha family transcriptional regulator [Yersinia thracica].
ACCESSION   WP_235942404
VERSION     WP_235942404.1
KEYWORDS    RefSeq.
SOURCE      Yersinia thracica
  ORGANISM  Yersinia thracica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 273)
  AUTHORS   Iyer,L.M., Koonin,E.V. and Aravind,L.
  TITLE     Extensive domain shuffling in transcription regulators of DNA
            viruses and implications for the origin of fungal APSES
            transcription factors
  JOURNAL   Genome Biol 3 (3), RESEARCH0012 (2002)
   PUBMED   11897024
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021206.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09669.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Yersinia thracica"
                     /db_xref="taxon:2890319"
     Protein         1..273
                     /product="Rha family transcriptional regulator"
                     /calculated_mol_wt=30036
     Region          1..>135
                     /region_name="pRha"
                     /note="Phage regulatory protein Rha [Mobilome: prophages,
                     transposons]; COG3646"
                     /db_xref="CDD:442863"
ORIGIN      
        1 msqlistnsn spmmgsrkia avtdkepkhv vrdikamleq laiyspnmdc ndfkgfliay
       61 kehggrtvid eiwlnetlsm tlvtgydanr rlalieqwqe mkveleqpri aalpapqeth
      121 mnndilslar vvaeatasat mkavidivgi qtyqpavepv aaiappapea lqvshhssdn
      181 eqseyalvsd lswacglsda acrrlatfsn lptcmtngdr ghllihrdlf mtvaqsllde
      241 sipptgklkr wqhpefggft lrlkseshtg etk
//
LOCUS       WP_235942487             249 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6503 family protein [Salinimicrobium oceani].
ACCESSION   WP_235942487
VERSION     WP_235942487.1
KEYWORDS    RefSeq.
SOURCE      Salinimicrobium oceani
  ORGANISM  Salinimicrobium oceani
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Salinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039474.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20113.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Salinimicrobium oceani"
                     /db_xref="taxon:2722702"
     Protein         1..249
                     /product="DUF6503 family protein"
                     /calculated_mol_wt=28437
     Region          3..240
                     /region_name="DUF6503"
                     /note="Family of unknown function (DUF6503); pfam20113"
                     /db_xref="CDD:466291"
ORIGIN      
        1 mmkkylyfsl llalfscnde astseadkiv akaieqagge kysrasiefn frgnlytsqr
       61 nggefeltrk itdstgttyy dvlnnkgfkr fhqdeevais dslagvyses vnavhyfvql
      121 pfglnddavv kelvgqdtvn gklyheikvt frqegggqdh edvymywidk enysvdylay
      181 rffvndggir frkavnprte ggirfvdyen yktndlttpl qdlddmfqkg elikvsqien
      241 eilnveike
//
LOCUS       WP_235942560             543 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Salinimicrobium oceani].
ACCESSION   WP_235942560
VERSION     WP_235942560.1
KEYWORDS    RefSeq.
SOURCE      Salinimicrobium oceani
  ORGANISM  Salinimicrobium oceani
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Salinimicrobium.
REFERENCE   1  (residues 1 to 543)
  AUTHORS   Clarke,T.A., Edwards,M.J., Gates,A.J., Hall,A., White,G.F.,
            Bradley,J., Reardon,C.L., Shi,L., Beliaev,A.S., Marshall,M.J.,
            Wang,Z., Watmough,N.J., Fredrickson,J.K., Zachara,J.M., Butt,J.N.
            and Richardson,D.J.
  TITLE     Structure of a bacterial cell surface decaheme electron conduit
  JOURNAL   Proc Natl Acad Sci U S A 108 (23), 9384-9389 (2011)
   PUBMED   21606337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037016.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17963.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Salinimicrobium oceani"
                     /db_xref="taxon:2722702"
     Protein         1..543
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=59019
     Region          28..111
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
     Region          117..203
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
     Region          210..298
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
     Region          398..534
                     /region_name="EndA"
                     /note="Endonuclease I [Replication, recombination and
                     repair]; COG2356"
                     /db_xref="CDD:441923"
ORIGIN      
        1 mkkilflita vmllgcskdd eggsnppvdp vaelpeavdd qlatsentpl kfsglldndt
       61 vhayarissm dsessnggsi vdnrdgtyty tppadfigdd tfeytmcdnk tprncstatv
      121 tvsvtaaspe avddsyetee ekvlfinthl nndnlvdnav vtsvgtddtn gevelkedgs
      181 itytpangft gvdtftytic dddeeptcat atisvtvtde gspdavddvv vmnsqnasit
      241 issllandvv vddavitsvq agsngsvvln edgtvtytpq taftgedtft ytlcdddtpd
      301 atcstatvtv kvivavsfni padiqdyysd ffftsdtdin rallgditii shttilsyge
      361 rhnylydada slenpenvvl mysgeerywr eytsgsnsys pqtfntehiy pqsrlssela
      421 vtdlhhlrva addvnslrln hpftegsgdy glvgddawyp gdewkgdvar mvlylniryg
      481 esfskvggld lflkwnaedp vsafevqrnn viesaqgnrn pfidnpylat liwggpqaen
      541 twd
//
LOCUS       WP_235942586             899 aa            linear   BCT 02-MAR-2025
DEFINITION  putative LPS assembly protein LptD [Salinimicrobium oceani].
ACCESSION   WP_235942586
VERSION     WP_235942586.1
KEYWORDS    RefSeq.
SOURCE      Salinimicrobium oceani
  ORGANISM  Salinimicrobium oceani
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Salinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040057.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19838.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..899
                     /organism="Salinimicrobium oceani"
                     /db_xref="taxon:2722702"
     Protein         1..899
                     /product="putative LPS assembly protein LptD"
                     /calculated_mol_wt=102650
     Region          223..693
                     /region_name="LptD_2"
                     /note="LptD protein; pfam19838"
                     /db_xref="CDD:466203"
ORIGIN      
        1 mrtkilyils csiflllsas kisaqeiktn egiripaerr aapaiqdslv itaptpaipg
       61 aapqdtvrrs nevltdqvvy saedymrlsp renrlylydn avitygdini tagkiildne
      121 rneiyaygip dstgtysqkp vftqgqnvvr pdsirfnfdt eralvfnsrt eqgefkvlge
      181 itkrendsvy ymknvkftts pneenpdyyf yarrikfvpd kkivsglvnm yiadvptplg
      241 lpfgyfpmte eetsgfiips fgddnnrgyy lqnggyyfai sdyvdltvlg dyytngsygf
      301 rtessyalry rfrgnlsfry eklinsergf pdfsessvyn lrwhhtqdsk aspssrfsas
      361 vnlgssdyyq astnqmntgn rltntlsssv sysktfniqp qvnlsvaath sqntntqqin
      421 mtlptvqasm arvypfepki gakkgiieni nfqynfrgen rfqttdslff kpemfknail
      481 gaqhqipltt nfklfnylsv nagtnyteaw vfktferryd edarlevidt vsgfdsyrty
      541 nfntsigtti ygtknfsgng kwqairhvlr psisyninpg fehyydeymi petddreari
      601 veysrfqgtl ygppgklfss siglslsntf eakvkdsada aprkvkllnn lnistsynla
      661 gdslrlspis vrgsipivqn kldvnfgtnl diyalnnnnr ridrlniqng gslfrltnan
      721 vsfgysfssr dfsggkenvn rlenqtfrng grpddlfgkd mdidgtfyde qeedmpeede
      781 esqnswynfn ipwdlrlayt mnysnsarqn elsshslmfs gdielspnwn igassgydfv
      841 nhgfthtqlr fardleswrm tfswtpfgly kqwnffigik ssllsdikye krrerdrsl
//
LOCUS       WP_235942604             414 aa            linear   BCT 02-MAR-2025
DEFINITION  3-deoxy-D-manno-octulosonic acid transferase [Salinimicrobium
            oceani].
ACCESSION   WP_235942604
VERSION     WP_235942604.1
KEYWORDS    RefSeq.
SOURCE      Salinimicrobium oceani
  ORGANISM  Salinimicrobium oceani
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Salinimicrobium.
REFERENCE   1  (residues 1 to 414)
  AUTHORS   Chung,H.S. and Raetz,C.R.
  TITLE     Interchangeable domains in the Kdo transferases of Escherichia coli
            and Haemophilus influenzae
  JOURNAL   Biochemistry 49 (19), 4126-4137 (2010)
   PUBMED   20394418
REFERENCE   2  (residues 1 to 414)
  AUTHORS   Lobau,S., Mamat,U., Brabetz,W. and Brade,H.
  TITLE     Molecular cloning, sequence analysis, and functional
            characterization of the lipopolysaccharide biosynthetic gene kdtA
            encoding 3-deoxy-alpha-D-manno-octulosonic acid transferase of
            Chlamydia pneumoniae strain TW-183
  JOURNAL   Mol Microbiol 18 (3), 391-399 (1995)
   PUBMED   8748024
REFERENCE   3  (residues 1 to 414)
  AUTHORS   Belunis,C.J. and Raetz,C.R.
  TITLE     Biosynthesis of endotoxins. Purification and catalytic properties
            of 3-deoxy-D-manno-octulosonic acid transferase from Escherichia
            coli
  JOURNAL   J Biol Chem 267 (14), 9988-9997 (1992)
   PUBMED   1577828
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11445568
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Salinimicrobium oceani"
                     /db_xref="taxon:2722702"
     Protein         1..414
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /EC_number="2.4.99.-"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=46877
     Region          1..410
                     /region_name="KdtA"
                     /note="3-deoxy-D-manno-octulosonic-acid transferase [Cell
                     wall/membrane/envelope biogenesis]; COG1519"
                     /db_xref="CDD:441128"
ORIGIN      
        1 mkflydfvis saekllpvag rlhdklnlft egrlglfehl aaeinnsdst iwihaaslge
       61 yeqavpvike lrhqfpdhki vvsffspsgy evkkasslad vvtylpldtr knvrrfldlv
      121 hpelvmfvky efwpnfldel atrrikslli sgafridqaf fkfygkwmrk ylsafdfffl
      181 qnhsslellq emgfsnavvs gdtrydrvfa qlsqdnhldf ieefvngdlc ivagstwped
      241 edlilefins detgakfiia phtiknfrik eleaklevps vkysewegen lkekkvfiid
      301 tiglltriys yadiafvgga sgntglhnvl epaafgvpii igkhygkfpe aaellrvgal
      361 fsvknseaat etfkdlvadk nlrkqlglma anyiankrga tetimdylsk nrnp
//
LOCUS       WP_235942630             862 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 2 TIM barrel-domain containing protein
            [Salinimicrobium oceani].
ACCESSION   WP_235942630
VERSION     WP_235942630.1
KEYWORDS    RefSeq.
SOURCE      Salinimicrobium oceani
  ORGANISM  Salinimicrobium oceani
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Salinimicrobium.
REFERENCE   1  (residues 1 to 862)
  AUTHORS   Jacobson,R.H., Zhang,X.J., DuBose,R.F. and Matthews,B.W.
  TITLE     Three-dimensional structure of beta-galactosidase from E. coli
  JOURNAL   Nature 369 (6483), 761-766 (1994)
   PUBMED   8008071
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02836.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Salinimicrobium oceani"
                     /db_xref="taxon:2722702"
     Protein         1..862
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=98602
     Region          31..722
                     /region_name="LacZ"
                     /note="Beta-galactosidase/beta-glucuronidase [Carbohydrate
                     transport and metabolism]; COG3250"
                     /db_xref="CDD:442481"
     Region          689..857
                     /region_name="Malectin"
                     /note="Malectin domain; pfam11721"
                     /db_xref="CDD:432024"
ORIGIN      
        1 miffrstvvi flfisslamg qrqvqtfnsa wkfssevhse rivdlphtwn aedafrdgke
       61 yfrgkgtysr nlytpqkwqn kqvflkfegs nqitrlyvne qligehpggy tgfvfditka
      121 lkpgaenelk ievdnshnad ippldadfnf yggiyrdlwl ittpklhfet aneaagnfli
      181 ttpevsaeka tykietrlvn slsqrisati eaeifdpqgn pfkilrkkir iapgateais
      241 feeelrdpql wsparpqlyk aevrviadge ildilissfg frwfeadpek gfflngiplk
      301 liganrhqdh fglgnalpnr lhqrdyemik emganfirta hypqdpevyr icdelgllvw
      361 sevpvindvt asqayhdvsl rmqreqilqf fnhpsiimwg hmneifirlv fnnkmtepek
      421 aakiktsvel agklekvtke ldpdrltvma lhenelynts giadipdvig wnlyfgwysp
      481 glesfgkfld qqherypnrp lfiseygpga dvriqttdpq pwdyseayql klhrsylnqv
      541 lerdyvfgma awnfadfgss frqdampyin qkglvnfdrs kkdiyyyyqa rlleepmiyv
      601 agenfqeryv enaedkveit ifsnasevtl ttseesysak tedgiaifki plpegknqvm
      661 atagevshsr tfevhyrenl vgrigkkalt invgahvqyk dpvtgeiwia dqeykegsfg
      721 yvggevfqkd rnkiqgtasd iqgtendplf qtmregieay kfdvekgnyl vtlmfaepqf
      781 nasealiynl ssseekpekt vrsfdiming rlvqqdlnla rdygkiravt ityevqsege
      841 invefvensg atlisaikle kl
//
LOCUS       WP_235942637             233 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5916 domain-containing protein, partial [Salinimicrobium
            oceani].
ACCESSION   WP_235942637
VERSION     WP_235942637.1
KEYWORDS    RefSeq.
SOURCE      Salinimicrobium oceani
  ORGANISM  Salinimicrobium oceani
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Salinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039587.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19313.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Salinimicrobium oceani"
                     /db_xref="taxon:2722702"
     Protein         <1..233
                     /product="DUF5916 domain-containing protein"
     Region          <3..203
                     /region_name="DUF5916"
                     /note="Domain of unknown function (DUF5916); pfam19313"
                     /db_xref="CDD:466036"
ORIGIN      
        1 lgtdfrkkfa iegvidwyky dekgrgdlii dfgpryrfsd kftvnwftni rlndqeegfv
       61 nllqddilfg qrdrhtltns lgstyiinnr tslnlafrhy ysevfyteyy tlqpngeldf
      121 yahgnndynt tynswnldlr fswwfapgsq ltllyrnain gfqdqshvnf gdnfrylfeq
      181 qqlnslslrl syyldynrvk nwlapqqkap anadalgasy kerknnpllk lsf
//
LOCUS       WP_235942641             267 aa            linear   BCT 02-MAR-2025
DEFINITION  ComEC/Rec2 family competence protein, partial [Salinimicrobium
            oceani].
ACCESSION   WP_235942641
VERSION     WP_235942641.1
KEYWORDS    RefSeq.
SOURCE      Salinimicrobium oceani
  ORGANISM  Salinimicrobium oceani
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Salinimicrobium.
REFERENCE   1  (residues 1 to 267)
  AUTHORS   Pestova,E.V. and Morrison,D.A.
  TITLE     Isolation and characterization of three Streptococcus pneumoniae
            transformation-specific loci by use of a lacZ reporter insertion
            vector
  JOURNAL   J Bacteriol 180 (10), 2701-2710 (1998)
   PUBMED   9573156
REFERENCE   2  (residues 1 to 267)
  AUTHORS   Clifton,S.W., McCarthy,D. and Roe,B.A.
  TITLE     Sequence of the rec-2 locus of Haemophilus influenzae: homologies
            to comE-ORF3 of Bacillus subtilis and msbA of Escherichia coli
  JOURNAL   Gene 146 (1), 95-100 (1994)
   PUBMED   8063112
REFERENCE   3  (residues 1 to 267)
  AUTHORS   Facius,D. and Meyer,T.F.
  TITLE     A novel determinant (comA) essential for natural transformation
            competence in Neisseria gonorrhoeae and the effect of a comA defect
            on pilin variation
  JOURNAL   Mol Microbiol 10 (4), 699-712 (1993)
   PUBMED   7934834
REFERENCE   4  (residues 1 to 267)
  AUTHORS   Hahn,J., Inamine,G., Kozlov,Y. and Dubnau,D.
  TITLE     Characterization of comE, a late competence operon of Bacillus
            subtilis required for the binding and uptake of transforming DNA
  JOURNAL   Mol Microbiol 10 (1), 99-111 (1993)
   PUBMED   7968523
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015714.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03772.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Salinimicrobium oceani"
                     /db_xref="taxon:2722702"
     Protein         1..>267
                     /product="ComEC/Rec2 family competence protein"
     Region          <1..>86
                     /region_name="ComEC"
                     /note="DNA uptake channel protein ComEC, N-terminal domain
                     [Intracellular trafficking, secretion, and vesicular
                     transport]; COG0658"
                     /db_xref="CDD:440423"
ORIGIN      
        1 mllllikpqw ifevgfqlsy aavisivllr plllelwept trtgkyfwdl ltvtiaaqig
       61 vlplslfyfh qfpglfflsn liilpflgii lilgvlvlil alagllpsfl vktyeliifv
      121 lnttveaias qekflfrdip fsltevwawy llilltfmll ksfsyrklla vlssviiiqa
      181 vyifqqtate delivfhrsr nsmigkveek klqlyhnssg aveelamikn yqvgesvsei
      241 eqkplqniyl qkghflilld stgilpk
//
LOCUS       WP_235942658             184 aa            linear   BCT 02-MAR-2025
DEFINITION  glutaminase, partial [Salinimicrobium oceani].
ACCESSION   WP_235942658
VERSION     WP_235942658.1
KEYWORDS    RefSeq.
SOURCE      Salinimicrobium oceani
  ORGANISM  Salinimicrobium oceani
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Salinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016824.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04960.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Salinimicrobium oceani"
                     /db_xref="taxon:2722702"
     Protein         1..>184
                     /product="glutaminase"
                     /EC_number="3.5.1.2"
                     /GO_function="GO:0004359 - glutaminase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
     Region          1..>184
                     /region_name="GlsA"
                     /note="Glutaminase [Amino acid transport and metabolism];
                     COG2066"
                     /db_xref="CDD:441669"
ORIGIN      
        1 mhlydldgnn ycfgdsnerf siqsiskvft lalgmkvvgd qlwnrvgvep sgdpfnslsq
       61 lendsgiprn pfinagamvv advlvsnftn pkaallaflh eitgdttidy dpvvaasers
      121 egyrnyamvn ylksfgnien svedvldfyf hqcsismscr dlsnasiifa ndgkvmgsdr
      181 eflt
//
LOCUS       WP_235942660              42 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Salinimicrobium oceani].
ACCESSION   WP_235942660
VERSION     WP_235942660.1
KEYWORDS    RefSeq.
SOURCE      Salinimicrobium oceani
  ORGANISM  Salinimicrobium oceani
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Salinimicrobium.
REFERENCE   1  (residues 1 to 42)
  AUTHORS   Yeo,C.C. and Poh,C.L.
  TITLE     Characterization of IS1474, an insertion sequence of the IS21
            family isolated from Pseudomonas alcaligenes NCIB 9867
  JOURNAL   FEMS Microbiol Lett 149 (2), 257-263 (1997)
   PUBMED   9141667
REFERENCE   2  (residues 1 to 42)
  AUTHORS   Solinas,F., Marconi,A.M., Ruzzi,M. and Zennaro,E.
  TITLE     Characterization and sequence of a novel insertion sequence,
            IS1162, from Pseudomonas fluorescens
  JOURNAL   Gene 155 (1), 77-82 (1995)
   PUBMED   7698671
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01695.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..42
                     /organism="Salinimicrobium oceani"
                     /db_xref="taxon:2722702"
     Protein         <1..42
                     /product="ATP-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <1..36
                     /region_name="DnaC"
                     /note="DNA replication protein DnaC [Replication,
                     recombination and repair]; COG1484"
                     /db_xref="CDD:441093"
ORIGIN      
        1 sawydiigeg tiadaildri vnsshridlk geslrkgvlk ne
//
LOCUS       WP_235942686             125 aa            linear   BCT 02-MAR-2025
DEFINITION  oligosaccharide flippase family protein, partial [Salinimicrobium
            oceani].
ACCESSION   WP_235942686
VERSION     WP_235942686.1
KEYWORDS    RefSeq.
SOURCE      Salinimicrobium oceani
  ORGANISM  Salinimicrobium oceani
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Salinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024832.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13440.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Salinimicrobium oceani"
                     /db_xref="taxon:2722702"
     Protein         1..>125
                     /product="oligosaccharide flippase family protein"
     Region          <1..125
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 mqddkhrmvs ayrrlikmss ffifpsmtll allsepiiil llgekwrpvi vllqwmcfar
       61 vfypistmnm nilnasgrsd lflkidlskl plliisliit vpigveaivi ghvvtsflsf
      121 finay
//
LOCUS       WP_235942697             137 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5916 domain-containing protein, partial [Salinimicrobium
            oceani].
ACCESSION   WP_235942697
VERSION     WP_235942697.1
KEYWORDS    RefSeq.
SOURCE      Salinimicrobium oceani
  ORGANISM  Salinimicrobium oceani
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Salinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039587.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19313.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Salinimicrobium oceani"
                     /db_xref="taxon:2722702"
     Protein         <1..>137
                     /product="DUF5916 domain-containing protein"
     Region          1..>131
                     /region_name="DUF5916"
                     /note="Domain of unknown function (DUF5916); pfam19313"
                     /db_xref="CDD:466036"
ORIGIN      
        1 ltdnevveey pstvdlinav kisgrtaqgl gigffnaite ktyatiknse tgekrkqlve
       61 pltnynilvl dqrfgdnssv sfintnttre ghfrdanaag vymdltnkss tfrysagaeg
      121 swvvsedtkf gaevnaa
//
LOCUS       WP_235942698             126 aa            linear   BCT 02-MAR-2025
DEFINITION  Eco57I restriction-modification methylase domain-containing
            protein, partial [Salinimicrobium oceani].
ACCESSION   WP_235942698
VERSION     WP_235942698.1
KEYWORDS    RefSeq.
SOURCE      Salinimicrobium oceani
  ORGANISM  Salinimicrobium oceani
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Salinimicrobium.
REFERENCE   1  (residues 1 to 126)
  AUTHORS   Schluckebier,G., Kozak,M., Bleimling,N., Weinhold,E. and Saenger,W.
  TITLE     Differential binding of S-adenosylmethionine S-adenosylhomocysteine
            and Sinefungin to the adenine-specific DNA methyltransferase M.TaqI
  JOURNAL   J Mol Biol 265 (1), 56-67 (1997)
   PUBMED   8995524
REFERENCE   2  (residues 1 to 126)
  AUTHORS   Janulaitis,A., Vaisvila,R., Timinskas,A., Klimasauskas,S. and
            Butkus,V.
  TITLE     Cloning and sequence analysis of the genes coding for Eco57I type
            IV restriction-modification enzymes
  JOURNAL   Nucleic Acids Res 20 (22), 6051-6056 (1992)
   PUBMED   1334261
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019291.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07669.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Salinimicrobium oceani"
                     /db_xref="taxon:2722702"
     Protein         1..>126
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
     Region          <21..126
                     /region_name="HsdM"
                     /note="Type I restriction-modification system, DNA
                     methylase subunit [Defense mechanisms]; COG0286"
                     /db_xref="CDD:440055"
ORIGIN      
        1 middeavagn kafkweeefp evfskggfdv vignppyvqt sdknfssykt fkcgdlyalf
       61 fergleitre kgyfsfitps lfikgmryev lrnflldnsr iieiadkgdn ifegvqmpta
      121 ittlqk
//
LOCUS       WP_235942699             133 aa            linear   BCT 02-MAR-2025
DEFINITION  AarF/UbiB family protein, partial [Salinimicrobium oceani].
ACCESSION   WP_235942699
VERSION     WP_235942699.1
KEYWORDS    RefSeq.
SOURCE      Salinimicrobium oceani
  ORGANISM  Salinimicrobium oceani
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Salinimicrobium.
REFERENCE   1  (residues 1 to 133)
  AUTHORS   Macinga,D.R., Cook,G.M., Poole,R.K. and Rather,P.N.
  TITLE     Identification and characterization of aarF, a locus required for
            production of ubiquinone in Providencia stuartii and Escherichia
            coli and for expression of 2'-N-acetyltransferase in P. stuartii
  JOURNAL   J Bacteriol 180 (1), 128-135 (1998)
   PUBMED   9422602
REFERENCE   2  (residues 1 to 133)
  AUTHORS   Bousquet,I., Dujardin,G. and Slonimski,P.P.
  TITLE     ABC1, a novel yeast nuclear gene has a dual function in
            mitochondria: it suppresses a cytochrome b mRNA translation defect
            and is essential for the electron transfer in the bc 1 complex
  JOURNAL   EMBO J 10 (8), 2023-2031 (1991)
   PUBMED   1648478
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015094.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03109.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Salinimicrobium oceani"
                     /db_xref="taxon:2722702"
     Protein         1..>133
                     /product="AarF/UbiB family protein"
     Region          <1..>133
                     /region_name="AarF"
                     /note="Predicted protein kinase regulating ubiquinone
                     biosynthesis, AarF/ABC1/UbiB family [Coenzyme transport
                     and metabolism, Signal transduction mechanisms]; COG0661"
                     /db_xref="CDD:440425"
ORIGIN      
        1 meyvkgkkit svsplkkten dylplvdeli eaylkqivsd gfvhadphpg nihlleneki
       61 almdlgmvaq fskqmkehll rlllglsknd geeiadilln msdlteqate refrreisim
      121 vqessnstak dmq
//
LOCUS       WP_235942705             133 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Salinimicrobium oceani].
ACCESSION   WP_235942705
VERSION     WP_235942705.1
KEYWORDS    RefSeq.
SOURCE      Salinimicrobium oceani
  ORGANISM  Salinimicrobium oceani
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Salinimicrobium.
REFERENCE   1  (residues 1 to 133)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Salinimicrobium oceani"
                     /db_xref="taxon:2722702"
     Protein         <1..>133
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          <1..107
                     /region_name="TopA"
                     /note="DNA topoisomerase IA [Replication, recombination
                     and repair]; COG0550"
                     /db_xref="CDD:440316"
ORIGIN      
        1 istiqnrnyi ekgsvdgter nyvqltlkgq kinekkltet vgsdkgklvp tdvgmvvndf
       61 lvnhfsgild ynftakveqd fdeiaegnee wtkmmrdfyn dfhphvkdva enadrevger
      121 ilgkdpvsgk pvs
//
LOCUS       WP_235942709              47 aa            linear   BCT 02-MAR-2025
DEFINITION  HisA/HisF-related TIM barrel protein, partial [Salinimicrobium
            oceani].
ACCESSION   WP_235942709
VERSION     WP_235942709.1
KEYWORDS    RefSeq.
SOURCE      Salinimicrobium oceani
  ORGANISM  Salinimicrobium oceani
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Salinimicrobium.
REFERENCE   1  (residues 1 to 47)
  AUTHORS   Copley,R.R. and Bork,P.
  TITLE     Homology among (betaalpha)(8) barrels: implications for the
            evolution of metabolic pathways
  JOURNAL   J Mol Biol 303 (4), 627-641 (2000)
   PUBMED   11054297
REFERENCE   2  (residues 1 to 47)
  AUTHORS   Fani,R., Tamburini,E., Mori,E., Lazcano,A., Lio,P., Barberio,C.,
            Casalone,E., Cavalieri,D., Perito,B. and Polsinelli,M.
  TITLE     Paralogous histidine biosynthetic genes: evolutionary analysis of
            the Saccharomyces cerevisiae HIS6 and HIS7 genes
  JOURNAL   Gene 197 (1-2), 9-17 (1997)
   PUBMED   9332345
REFERENCE   3  (residues 1 to 47)
  AUTHORS   Fani,R., Lio,P., Chiarelli,I. and Bazzicalupo,M.
  TITLE     The evolution of the histidine biosynthetic genes in prokaryotes: a
            common ancestor for the hisA and hisF genes
  JOURNAL   J Mol Evol 38 (5), 489-495 (1994)
   PUBMED   8028028
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013168.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00977.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..47
                     /organism="Salinimicrobium oceani"
                     /db_xref="taxon:2722702"
     Protein         1..>47
                     /product="HisA/HisF-related TIM barrel protein"
                     /GO_process="GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
     Region          2..>47
                     /region_name="HisF"
                     /note="Imidazole glycerol phosphate synthase subunit HisF
                     [Amino acid transport and metabolism]; COG0107"
                     /db_xref="CDD:439877"
ORIGIN      
        1 mltkriipcl dikdgrtvkg vnfvslrdag dpvelaemys kagadel
//
LOCUS       WP_235942715              74 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Salinimicrobium oceani].
ACCESSION   WP_235942715
VERSION     WP_235942715.1
KEYWORDS    RefSeq.
SOURCE      Salinimicrobium oceani
  ORGANISM  Salinimicrobium oceani
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Salinimicrobium.
REFERENCE   1  (residues 1 to 74)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Salinimicrobium oceani"
                     /db_xref="taxon:2722702"
     Protein         1..>74
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>74
                     /region_name="CysN"
                     /note="Sulfate adenylyltransferase subunit 1, EFTu-like
                     GTPase family [Inorganic ion transport and metabolism];
                     COG2895"
                     /db_xref="CDD:442140"
ORIGIN      
        1 meinnnqllr fttagsvddg kstligrlly dsksifedql esvsatsakk ghdgidlalf
       61 tdglkderdq giti
//
LOCUS       WP_235942720             121 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase, partial [Salinimicrobium oceani].
ACCESSION   WP_235942720
VERSION     WP_235942720.1
KEYWORDS    RefSeq.
SOURCE      Salinimicrobium oceani
  ORGANISM  Salinimicrobium oceani
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Salinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024118.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12706.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Salinimicrobium oceani"
                     /db_xref="taxon:2722702"
     Protein         <1..>121
                     /product="MBL fold metallo-hydrolase"
     Region          <2..121
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(13,15,17..18,91..92,109)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 ihldlffail fphdksyhtv glddirpyff kqgdipvyah qrvmaslqkr fdyifdsenk
       61 ypgapsvqeh vitntaftvk gvnilpvevm hnrvqvfgfr irdfayitda kiveeeeaek
      121 l
//
LOCUS       WP_235942729             113 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5916 domain-containing protein, partial [Salinimicrobium
            oceani].
ACCESSION   WP_235942729
VERSION     WP_235942729.1
KEYWORDS    RefSeq.
SOURCE      Salinimicrobium oceani
  ORGANISM  Salinimicrobium oceani
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Salinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039587.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19313.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Salinimicrobium oceani"
                     /db_xref="taxon:2722702"
     Protein         <1..>113
                     /product="DUF5916 domain-containing protein"
     Region          <1..>112
                     /region_name="DUF5916"
                     /note="Domain of unknown function (DUF5916); pfam19313"
                     /db_xref="CDD:466036"
ORIGIN      
        1 pnsnklgfas llsfartkgq lryglshefa netydindmg lnftnnynnf fwdasyrife
       61 pqgifneyni rltgnhqrry dpdmavttnf gtsffgmtkr rfafggsany stp
//
LOCUS       WP_235942722              99 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase, partial [Salinimicrobium oceani].
ACCESSION   WP_235942722
VERSION     WP_235942722.1
KEYWORDS    RefSeq.
SOURCE      Salinimicrobium oceani
  ORGANISM  Salinimicrobium oceani
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Salinimicrobium.
REFERENCE   1  (residues 1 to 99)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Salinimicrobium oceani"
                     /db_xref="taxon:2722702"
     Protein         1..>99
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <9..97
                     /region_name="GH43_62_32_68_117_130"
                     /note="Glycosyl hydrolase families: GH43, GH62, GH32,
                     GH68, GH117, CH130; cl14647"
                     /db_xref="CDD:449341"
ORIGIN      
        1 mddkdnpphv svnegpqyle hngqvfivys angcwtdyys lgllsltged ildpanwekn
       61 akpifrksee ngvyapghns ffkspdgted wilyhanan
//
LOCUS       WP_235942737              82 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2961 domain-containing protein, partial [Salinimicrobium
            oceani].
ACCESSION   WP_235942737
VERSION     WP_235942737.1
KEYWORDS    RefSeq.
SOURCE      Salinimicrobium oceani
  ORGANISM  Salinimicrobium oceani
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Salinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022623.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11175.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Salinimicrobium oceani"
                     /db_xref="taxon:2722702"
     Protein         1..>82
                     /product="DUF2961 domain-containing protein"
     Region          1..>74
                     /region_name="DUF2961"
                     /note="Protein of unknown function (DUF2961); pfam11175"
                     /db_xref="CDD:463235"
ORIGIN      
        1 mfwdgeenpa vsvplgdffg iglgkkaafe salfadpegr sfncfipmpf kekavirvtn
       61 eskkdlhqif yeinlleksh fq
//
LOCUS       WP_235942733             105 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5929 domain-containing protein, partial [Salinimicrobium
            oceani].
ACCESSION   WP_235942733
VERSION     WP_235942733.1
KEYWORDS    RefSeq.
SOURCE      Salinimicrobium oceani
  ORGANISM  Salinimicrobium oceani
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Salinimicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039298.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19351.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Salinimicrobium oceani"
                     /db_xref="taxon:2722702"
     Protein         <1..>105
                     /product="DUF5929 domain-containing protein"
     Region          <1..>105
                     /region_name="DUF5929"
                     /note="Domain of unknown function (DUF5929); pfam19351"
                     /db_xref="CDD:466050"
ORIGIN      
        1 qvklfyseld evsieisedl fsileyvrlg vndrfryypl eevkiffkdn atyeiktnvl
       61 feppqyekkt lfhiynanqa lmnklknglk ltpaeekdlf nlpat
//
LOCUS       WP_235942780              90 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Anaerococcus faecalis].
ACCESSION   WP_235942780
VERSION     WP_235942780.1
KEYWORDS    RefSeq.
SOURCE      Anaerococcus faecalis
  ORGANISM  Anaerococcus faecalis
            Bacteria; Bacillati; Bacillota; Tissierellia; Tissierellales;
            Peptoniphilaceae; Anaerococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00872.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Anaerococcus faecalis"
                     /db_xref="taxon:2742993"
     Protein         1..>90
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          2..>89
                     /region_name="Transposase_mut"
                     /note="Transposase, Mutator family; cl27632"
                     /db_xref="CDD:474953"
ORIGIN      
        1 mlieeyqpqs aqdiqealkd llgdtmqell kaeldehldy eygekplsln trngtskktv
       61 rssygnieln iprdregtfe pqslkkyekd
//
LOCUS       WP_235942782             128 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein
            [Anaerococcus faecalis].
ACCESSION   WP_235942782
VERSION     WP_235942782.1
KEYWORDS    RefSeq.
SOURCE      Anaerococcus faecalis
  ORGANISM  Anaerococcus faecalis
            Bacteria; Bacillati; Bacillota; Tissierellia; Tissierellales;
            Peptoniphilaceae; Anaerococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Anaerococcus faecalis"
                     /db_xref="taxon:2742993"
     Protein         1..128
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=15010
     Region          1..>123
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
ORIGIN      
        1 mikkvdskpi sdvnltfrne fknkmindle tikgflnnif aiilyffmfi islisalyie
       61 ktltlimlil sfilflspfi srkilsnkke keiesknkyl dlfnefntnt fyikisnlgd
      121 ffiinlkn
//
LOCUS       WP_235942813             727 aa            linear   BCT 02-MAR-2025
DEFINITION  bifunctional DNA primase/polymerase [Ochrobactrum soli].
ACCESSION   WP_235942813
VERSION     WP_235942813.1
KEYWORDS    RefSeq.
SOURCE      Ochrobactrum soli
  ORGANISM  Ochrobactrum soli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Ochrobactrum.
REFERENCE   1  (residues 1 to 727)
  AUTHORS   Lipps,G., Weinzierl,A.O., von Scheven,G., Buchen,C. and Cramer,P.
  TITLE     Structure of a bifunctional DNA primase-polymerase
  JOURNAL   Nat Struct Mol Biol 11 (2), 157-162 (2004)
   PUBMED   14730355
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020811.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09250.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Ochrobactrum soli"
                     /db_xref="taxon:2448455"
     Protein         1..727
                     /product="bifunctional DNA primase/polymerase"
                     /calculated_mol_wt=79805
     Region          18..185
                     /region_name="Prim-Pol"
                     /note="Bifunctional DNA primase/polymerase, N-terminal;
                     pfam09250"
                     /db_xref="CDD:430484"
     Site            order(51,95,97,130,150)
                     /site_type="active"
                     /note="polymerase nucleotide-binding site [active]"
                     /db_xref="CDD:240129"
     Site            order(52,56,157,163)
                     /site_type="DNA binding"
                     /note="DNA-binding residues [nucleotide binding]"
                     /db_xref="CDD:240129"
     Site            order(82,95,97,124,127..128,130,150,157)
                     /site_type="other"
                     /note="nucleotide binding site [chemical binding]"
                     /db_xref="CDD:240129"
     Site            order(95,97,130,150)
                     /site_type="other"
                     /note="primase nucleotide-binding site [nucleotide
                     binding]"
                     /db_xref="CDD:240129"
     Region          367..682
                     /region_name="RepA"
                     /note="RecA-family ATPase [Replication, recombination and
                     repair]; COG3598"
                     /db_xref="CDD:442817"
ORIGIN      
        1 menniqvfsg edpmldvala ytarnwpvfp craadeefvd edgiieilat ktpltsngfr
       61 gatlnerivr elwrrnpgam igvptgatig awvldidpkh ggpdtlaale aehgalpatl
      121 taettsggrh yffkhkagvr nrgalgagid vrgdggyvia agsvpavgqp yrwlvdmepv
      181 dapdwllelv ltrsydsttm yqapsvsgti ndryveravq selddlamep mgnrnnrlnd
      241 aafrmgtfvg aealseaear allqdvargw grdfprcckt idnglkagkm hprqapeavn
      301 dntklvditr mldnarakvd eqrepeahkd epdvqhdapv iedeptdqpi laatpfqwkd
      361 pstlprrefa fgrhfirkyv svtvapgglg ktansiveal amasgkalng vkpprrlkvw
      421 lfnvedprde lerrimaaci hfnlkpedid ghlfldsgre qelvvaiddk kgvkiqepiv
      481 eavaetilan gidvmivdpf vsthqvnend ngaidkvakl waqiadytnc sidivhhlrk
      541 vsdreatved argavaliga arsvrvlnrm seaqaneagi pgmdrfgyfs itygksnltp
      601 lshrldwrhi esvalgngrg ltqpqdhapv vtewhwpsse evaegltdeq reairgavng
      661 gmykqaanak dwvglaiaya vgldadddaq rkkagmitka lfkegfltkv eerdpiqrrm
      721 ttfvrav
//
LOCUS       WP_235942888             138 aa            linear   BCT 02-MAR-2025
DEFINITION  bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine
            kinase [Ochrobactrum soli].
ACCESSION   WP_235942888
VERSION     WP_235942888.1
KEYWORDS    RefSeq.
SOURCE      Ochrobactrum soli
  ORGANISM  Ochrobactrum soli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Ochrobactrum.
REFERENCE   1  (residues 1 to 138)
  AUTHORS   Petersen,L.A. and Downs,D.M.
  TITLE     Identification and characterization of an operon in Salmonella
            typhimurium involved in thiamine biosynthesis
  JOURNAL   J Bacteriol 179 (15), 4894-4900 (1997)
   PUBMED   9244280
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020132.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08543.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Ochrobactrum soli"
                     /db_xref="taxon:2448455"
     Protein         1..138
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /calculated_mol_wt=15234
     Region          <6..>119
                     /region_name="PdxK"
                     /note="Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme
                     transport and metabolism]; COG2240"
                     /db_xref="CDD:441841"
ORIGIN      
        1 mietsryivs gylgsrangd vvaafverar qinsdiiyic dpvmgdsnlg vfvadqvvec
       61 icnelvplag vltpyqfevg liargqpwnw tqldatvrqi qmlrnarlvv tgctldhtpm
      121 aplriscsrr icckrfvn
//
LOCUS       WP_235943060              40 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3278 domain-containing protein [Lactobacillus helveticus].
ACCESSION   WP_235943060
VERSION     WP_235943060.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus helveticus
  ORGANISM  Lactobacillus helveticus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023112.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11683.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..40
                     /organism="Lactobacillus helveticus"
                     /db_xref="taxon:1587"
     Protein         1..40
                     /product="DUF3278 domain-containing protein"
                     /calculated_mol_wt=4803
     Region          1..>37
                     /region_name="DUF3278"
                     /note="Protein of unknown function (DUF3278); pfam11683"
                     /db_xref="CDD:371668"
ORIGIN      
        1 mrrqeslwlk firywfgids rlderqlaev erignnahsi
//
LOCUS       WP_235943104              95 aa            linear   BCT 02-MAR-2025
DEFINITION  SIS domain-containing protein [Lactobacillus helveticus].
ACCESSION   WP_235943104
VERSION     WP_235943104.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus helveticus
  ORGANISM  Lactobacillus helveticus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (residues 1 to 95)
  AUTHORS   Bateman,A.
  TITLE     The SIS domain: a phosphosugar-binding domain
  JOURNAL   Trends Biochem Sci 24 (3), 94-95 (1999)
   PUBMED   10203754
REFERENCE   2  (residues 1 to 95)
  AUTHORS   Teplyakov,A., Obmolova,G., Badet-Denisot,M.A., Badet,B. and
            Polikarpov,I.
  TITLE     Involvement of the C terminus in intramolecular nitrogen channeling
            in glucosamine 6-phosphate synthase: evidence from a 1.6 A crystal
            structure of the isomerase domain
  JOURNAL   Structure 6 (8), 1047-1055 (1998)
   PUBMED   9739095
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013539.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01380.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Lactobacillus helveticus"
                     /db_xref="taxon:1587"
     Protein         1..95
                     /product="SIS domain-containing protein"
                     /GO_function="GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA]"
                     /GO_process="GO:1901135 - carbohydrate derivative
                     metabolic process [Evidence IEA]"
                     /calculated_mol_wt=10775
     Region          <2..60
                     /region_name="SIS"
                     /note="SIS domain. SIS (Sugar ISomerase) domains are found
                     in many phosphosugar isomerases and phosphosugar binding
                     proteins. SIS domains are also found in proteins that
                     regulate the expression of genes involved in synthesis of
                     phosphosugars; cl00389"
                     /db_xref="CDD:444881"
ORIGIN      
        1 mtqepllmak qarknhakiv litrektspl rqisdivisl ptnekllrfg avnslfsemf
       61 assllylsli spklnelkek meitqeltdy lkikd
//
LOCUS       WP_235943114             349 aa            linear   BCT 02-MAR-2025
DEFINITION  replication initiator protein A [Lactobacillus helveticus].
ACCESSION   WP_235943114
VERSION     WP_235943114.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus helveticus
  ORGANISM  Lactobacillus helveticus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (residues 1 to 349)
  AUTHORS   Diaz-Lopez,T., Lages-Gonzalo,M., Serrano-Lopez,A., Alfonso,C.,
            Rivas,G., Diaz-Orejas,R. and Giraldo,R.
  TITLE     Structural changes in RepA, a plasmid replication initiator, upon
            binding to origin DNA
  JOURNAL   J Biol Chem 278 (20), 18606-18616 (2003)
   PUBMED   12637554
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018653.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06970.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Lactobacillus helveticus"
                     /db_xref="taxon:1587"
     Protein         1..349
                     /product="replication initiator protein A"
                     /calculated_mol_wt=40455
     Region          13..88
                     /region_name="HTH_ARSR"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; cl46857"
                     /db_xref="CDD:481197"
     Region          238..335
                     /region_name="Bac_RepA_C"
                     /note="Replication initiator protein A C-terminal domain;
                     pfam18008"
                     /db_xref="CDD:436207"
ORIGIN      
        1 mtkrfnatqi naelfwkfpk flsenkkyad ltnddrvaym likdryrysl snnwidkdkn
       61 iyvyftieel rqllhvgknk vtriknrlid aglleiekdg fnpkdkknyp driyllqpey
      121 dptdlisqns hasaleqsgi pkmgtrsqne gnldnkgksd senchkgtsa leqsgipkmg
      181 tnkdnkkiyt ikdtikdtdq wnfstnnytp eqvaaqnqdl lshlgetltg dkeapmflnk
      241 aainliakwf rtpegaseci stilnaands rknaesqigh helyfedynn elkrmitnrl
      301 rryfnkmrta kdgkiknpkn ylyvsmrnmf dkwqndvlma ekdeannkn
//
LOCUS       WP_235943120             382 aa            linear   BCT 02-MAR-2025
DEFINITION  mucin-binding protein [Lactobacillus helveticus].
ACCESSION   WP_235943120
VERSION     WP_235943120.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus helveticus
  ORGANISM  Lactobacillus helveticus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (residues 1 to 382)
  AUTHORS   MacKenzie,D.A., Tailford,L.E., Hemmings,A.M. and Juge,N.
  TITLE     Crystal structure of a mucus-binding protein repeat reveals an
            unexpected functional immunoglobulin binding activity
  JOURNAL   J Biol Chem 284 (47), 32444-32453 (2009)
   PUBMED   19758995
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17966.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Lactobacillus helveticus"
                     /db_xref="taxon:1587"
     Protein         1..382
                     /product="mucin-binding protein"
                     /calculated_mol_wt=41749
     Region          21..95
                     /region_name="MucBP_2"
                     /note="Mucin binding domain; pfam17965"
                     /db_xref="CDD:465592"
     Region          118..191
                     /region_name="Muc_B2"
                     /note="Muc B2-like domain; pfam17966"
                     /db_xref="CDD:465593"
     Region          343..382
                     /region_name="Gram_pos_anchor"
                     /note="LPXTG cell wall anchor motif; pfam00746"
                     /db_xref="CDD:366278"
ORIGIN      
        1 mtpgdvyvvy kaknpdvqqa tvtviyhddt ddknlpggwt sgeqdegtpv kytqddinka
       61 iegwkkkhyh yvrtdgtlpt tipaqdttvt vhlahnmipv npntpdkhgv npdqltetft
      121 stlhyqtkeg kqlapdavqs snwirrvtvd evtnkvvpdg eyttkwqlvg nddrynnfnv
      181 pveigyvaek ttkdgapvtn ivpgqikvqr nledtviydk ladiipvdpe gtpipgvpkt
      241 pekdntpeps eptpdvpepd epepdepdvp tprrhhknkk htsasktmnn wsnnrspyge
      301 nsnykpiget apgngesvlp ngevvdhngn vvgyvdangk ihhtlpqtge snnenvvaav
      361 lggtavalgl igltgvkrrh tn
//
LOCUS       WP_235943137              88 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Lactobacillus helveticus].
ACCESSION   WP_235943137
VERSION     WP_235943137.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus helveticus
  ORGANISM  Lactobacillus helveticus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Lactobacillus helveticus"
                     /db_xref="taxon:1587"
     Protein         1..88
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=9462
     Region          1..>79
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mgllidivtp wfdlllvgra lqgigtgigl plmyniilae vpkeklgfmm givtiitaca
       61 vafgpvvggi vtdalnwrwy lyrskvnn
//
LOCUS       WP_235943172             243 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Zoogloea dura].
ACCESSION   WP_235943172
VERSION     WP_235943172.1
KEYWORDS    RefSeq.
SOURCE      Zoogloea dura
  ORGANISM  Zoogloea dura
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Rhodocyclales; Zoogloeaceae; Zoogloea.
REFERENCE   1  (residues 1 to 243)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 243)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 243)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 243)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Zoogloea dura"
                     /db_xref="taxon:2728840"
     Protein         1..243
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=26371
     Region          10..220
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            42..49
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213179"
     Site            order(45..46,48..50,83,158..159,191)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:213179"
     Site            80..83
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213179"
     Site            134..143
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213179"
     Site            154..159
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213179"
     Site            162..165
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213179"
     Site            187..193
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213179"
ORIGIN      
        1 msdaapmfpl rvrdlrweag graildgldl dlagegitil lgpngagksv llrtlcglle
       61 pqagtidwgg grrpesgvam vfqharmlrd svcgnvelal lparlaager reralavler
      121 vglaqraads aralsggerq rlalarawvt qprlllldep tasldpssvd rierivreir
      181 tegtrilmtt hnlgqatrla ddvvfidagr vcehapvqrf farpasqaar lyiqgelpwr
      241 maf
//
LOCUS       WP_235943440             130 aa            linear   BCT 02-MAR-2025
DEFINITION  antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein
            [Zoogloea dura].
ACCESSION   WP_235943440
VERSION     WP_235943440.1
KEYWORDS    RefSeq.
SOURCE      Zoogloea dura
  ORGANISM  Zoogloea dura
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Rhodocyclales; Zoogloeaceae; Zoogloea.
REFERENCE   1  (residues 1 to 130)
  AUTHORS   Zhang,S.P., Feng,H.Z., Wang,Q., Kempher,M.L., Quan,S.W., Tao,X.,
            Niu,S., Wang,Y., Feng,H.Y. and He,Y.X.
  TITLE     Bacterial type II toxin-antitoxin systems acting through
            post-translational modifications
  JOURNAL   Comput Struct Biotechnol J 19, 86-93 (2020)
   PUBMED   33384857
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 130)
  AUTHORS   Freire,D.M., Gutierrez,C., Garza-Garcia,A., Grabowska,A.D.,
            Sala,A.J., Ariyachaokun,K., Panikova,T., Beckham,K.S.H., Colom,A.,
            Pogenberg,V., Cianci,M., Tuukkanen,A., Boudehen,Y.M., Peixoto,A.,
            Botella,L., Svergun,D.I., Schnappinger,D., Schneider,T.R.,
            Genevaux,P., de Carvalho,L.P.S., Wilmanns,M., Parret,A.H.A. and
            Neyrolles,O.
  TITLE     An NAD+ Phosphorylase Toxin Triggers Mycobacterium tuberculosis
            Cell Death
  JOURNAL   Mol Cell 73 (6), 1282-1291 (2019)
   PUBMED   30792174
REFERENCE   3  (residues 1 to 130)
  AUTHORS   Piscotta,F.J., Jeffrey,P.D. and Link,A.J.
  TITLE     ParST is a widespread toxin-antitoxin module that targets
            nucleotide metabolism
  JOURNAL   Proc Natl Acad Sci U S A 116 (3), 826-834 (2019)
   PUBMED   30598453
REFERENCE   4  (residues 1 to 130)
  AUTHORS   Skjerning,R.B., Senissar,M., Winther,K.S., Gerdes,K. and
            Brodersen,D.E.
  TITLE     The RES domain toxins of RES-Xre toxin-antitoxin modules induce
            cell stasis by degrading NAD+
  JOURNAL   Mol Microbiol 111 (1), 221-236 (2019)
   PUBMED   30315706
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021255.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09722.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Zoogloea dura"
                     /db_xref="taxon:2728840"
     Protein         1..130
                     /product="antitoxin Xre/MbcA/ParS toxin-binding
                     domain-containing protein"
                     /calculated_mol_wt=14666
     Region          3..130
                     /region_name="COG5642"
                     /note="Uncharacterized conserved protein, DUF2384 family
                     [Function unknown]"
                     /db_xref="CDD:444366"
ORIGIN      
        1 malvpaphsf aeldemvskg lpkgalkasi dhvhvsaedr kqllyrivpe atykrrresl
       61 saeesarver larifataay vwdseedars flnaphsmlq drrpldvsmt elgarrveel
      121 lwrlyygiaa
//
LOCUS       WP_235943442             929 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Zoogloea dura].
ACCESSION   WP_235943442
VERSION     WP_235943442.1
KEYWORDS    RefSeq.
SOURCE      Zoogloea dura
  ORGANISM  Zoogloea dura
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Rhodocyclales; Zoogloeaceae; Zoogloea.
REFERENCE   1  (residues 1 to 929)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 929)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 929)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 929)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..929
                     /organism="Zoogloea dura"
                     /db_xref="taxon:2728840"
     Protein         1..929
                     /product="ATP-binding protein"
                     /calculated_mol_wt=102243
     Region          3..66
                     /region_name="PAS"
                     /note="PAS domain; smart00091"
                     /db_xref="CDD:214512"
     Region          <55..566
                     /region_name="PRK09959"
                     /note="acid-sensing system histidine kinase EvgS"
                     /db_xref="CDD:182169"
     Region          132..370
                     /region_name="KdpD"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; COG2205"
                     /db_xref="CDD:441807"
     Region          580..929
                     /region_name="COG4191"
                     /note="Signal transduction histidine kinase regulating
                     C4-dicarboxylate transport system [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443345"
ORIGIN      
        1 mariildsmy qflglldvdg tvleinraal dgaglcleqv vgrpfwharw wevseevrvr
       61 vremiaeare grfvrcdfev ygeqhgekti sidfsltpim ndagevafll pegrniteki
      121 aisaeltrkn gelqnalerl kqidgfktkf fanvshelrt plalilgpvd qllkegmalg
      181 ererfrlkti khnaqsllqq vndlldlari dadrmpmayv canitamard iaasfaeiae
      241 ersitlrvrg eselyadvdr vkfvrvlvnl lanafkftpp ggrisctler iqdarflvsv
      301 qdtgpgvadp mkpqifdrft qaeagqgtmg sglglnivke fvelhggtvv vvdapgggai
      361 fqveipirap ngafvresge epllhadyrh gtasmpdmhl panragrprv lvvednpdlr
      421 lflfdvlide ynvsleedga aalasaladp pdliitdlmm prfdgerfir alrgtpdfpr
      481 vpilvlsara ddvlreslle alvqdyvtkp fspqelrarv rnlvavkctv dilqkelntq
      541 asdiceltng lvdsrktlqk sllalqvser rwlglyenta vgialadrdg rilsanpalq
      601 emlgysrsei lgvnlieite esqrsrtemn vqglfdgvrp syqiqkryek kcggflwanv
      661 casripavdq egpmlavive ditarkegeq slaatrsela rvsrfttmge lvasiahevn
      721 qplsavitns daalrwlsla epnhdevvaa lhrvnrdatl aagvitrirk flrageikre
      781 rivvarllne lllmlqtvll dagvevdvsl padlpelqad avqlqqviln livnavdamr
      841 eqpggahrll vevkedaasg mlfavhddgp gvpagardkl fdaffstkqd glgmglaisr
      901 tivenhggrl wldaavpsga rfvfnipaa
//
LOCUS       WP_235943561             205 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Zoogloea dura].
ACCESSION   WP_235943561
VERSION     WP_235943561.1
KEYWORDS    RefSeq.
SOURCE      Zoogloea dura
  ORGANISM  Zoogloea dura
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Rhodocyclales; Zoogloeaceae; Zoogloea.
REFERENCE   1  (residues 1 to 205)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Zoogloea dura"
                     /db_xref="taxon:2728840"
     Protein         <1..205
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..167
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            1..33
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 tnilalnaav eaarageqgr gfavvasevr slaqrsaqaa reikaliads vdkvedgakl
       61 vneaghtmee vvsnfqklss lvteiaeasq eqssgieqvt havgqmdevt qqnaalveea
      121 aaaaesledq arslvrsvam frlsaagvaa gngatvtaap vvpdnvarlp eragrstpqk
      181 gghalpkvrr aggisndldd eweef
//
LOCUS       WP_235943669             447 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase RNA specificity domain-containing
            protein [Zoogloea dura].
ACCESSION   WP_235943669
VERSION     WP_235943669.1
KEYWORDS    RefSeq.
SOURCE      Zoogloea dura
  ORGANISM  Zoogloea dura
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Rhodocyclales; Zoogloeaceae; Zoogloea.
REFERENCE   1  (residues 1 to 447)
  AUTHORS   Roux,C.M., DeMuth,J.P. and Dunman,P.M.
  TITLE     Characterization of components of the Staphylococcus aureus mRNA
            degradosome holoenzyme-like complex
  JOURNAL   J Bacteriol 193 (19), 5520-5526 (2011)
   PUBMED   21764917
REFERENCE   2  (residues 1 to 447)
  AUTHORS   Nishida,Y., Ishikawa,H., Baba,S., Nakagawa,N., Kuramitsu,S. and
            Masui,R.
  TITLE     Crystal structure of an archaeal cleavage and polyadenylation
            specificity factor subunit from Pyrococcus horikoshii
  JOURNAL   Proteins 78 (10), 2395-2398 (2010)
   PUBMED   20544974
REFERENCE   3  (residues 1 to 447)
  AUTHORS   Mandel,C.R., Kaneko,S., Zhang,H., Gebauer,D., Vethantham,V.,
            Manley,J.L. and Tong,L.
  TITLE     Polyadenylation factor CPSF-73 is the pre-mRNA 3'-end-processing
            endonuclease
  JOURNAL   Nature 444 (7121), 953-956 (2006)
   PUBMED   17128255
REFERENCE   4  (residues 1 to 447)
  AUTHORS   Callebaut,I., Moshous,D., Mornon,J.P. and de Villartay,J.P.
  TITLE     Metallo-beta-lactamase fold within nucleic acids processing
            enzymes: the beta-CASP family
  JOURNAL   Nucleic Acids Res 30 (16), 3592-3601 (2002)
   PUBMED   12177301
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019159.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07521.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Zoogloea dura"
                     /db_xref="taxon:2728840"
     Protein         1..447
                     /product="MBL fold metallo-hydrolase RNA specificity
                     domain-containing protein"
                     /calculated_mol_wt=49899
     Region          8..444
                     /region_name="COG1782"
                     /note="Predicted metal-dependent RNase, contains
                     metallo-beta-lactamase and KH domains [General function
                     prediction only]"
                     /db_xref="CDD:441388"
ORIGIN      
        1 mddtyslmvd cglfqgaets pdgmtgahdl eytfpvdrvr alvlthvhvd hvgrlpwlma
       61 agfhgpifcs epsarllpav ladafamgvt rnarlveryl qmvesrlrpl pwktwqtvye
      121 gpggrcrirl qraghilgaa yvecdlrrpd geslrvvfsg dlgapyapll papqspwaad
      181 vvvlestygd rmhdtrstrr erlqavveka lgnggtviip afsigrtqel lyefedilyr
      241 qrqrpgrhaa qwarlrfyld splaerftel yrelqpywda ealarvragr rplgfdqlva
      301 ieghadhean vrrlarsgep avviaasgmc aggrvthylk amlhdprhdv lfvgyqargt
      361 pgsviqdfgp kggyvvldge ryeiragihs lsgysahadq ndlvrfitrm rrwprevrli
      421 hgddparhal aqrlteatqg rvivtng
//
LOCUS       WP_417281877             287 aa            linear   BCT 02-MAR-2025
DEFINITION  hypothetical protein [Castellaniella hirudinis].
ACCESSION   WP_417281877
VERSION     WP_417281877.1
KEYWORDS    RefSeq.
SOURCE      Castellaniella hirudinis
  ORGANISM  Castellaniella hirudinis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Castellaniella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Castellaniella hirudinis"
                     /db_xref="taxon:1144617"
     Protein         1..287
                     /product="hypothetical protein"
                     /calculated_mol_wt=29441
ORIGIN      
        1 mtdfvmtgka sfaaaqaaek sgvvrvfttp efaaaqaaek pagqagatpa pfaaaqaaek
       61 qilcfqtdea efaaaqaaek rgskknaqsi gfaaaqaaek lgdeplalai afaaaqaaek
      121 ikrrnaansa wfaaaqaaek avagvaaarh lfaaaqaaek dpdlvvrlpd mfaaaqaaek
      181 vaisssvstr mfaaaqaaek sktqdaggma vfaaaqaaek slmalrsgff lfaaaqatek
      241 sksgmcrpwh rfaaaqaaek fvrpllnfsl vfaavqaaek wpmappl
//
LOCUS       WP_417281878             187 aa            linear   BCT 02-MAR-2025
DEFINITION  hypothetical protein [Castellaniella hirudinis].
ACCESSION   WP_417281878
VERSION     WP_417281878.1
KEYWORDS    RefSeq.
SOURCE      Castellaniella hirudinis
  ORGANISM  Castellaniella hirudinis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Castellaniella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Castellaniella hirudinis"
                     /db_xref="taxon:1144617"
     Protein         1..187
                     /product="hypothetical protein"
                     /calculated_mol_wt=20076
ORIGIN      
        1 mfaavqvaek trssemihsa efaatqatek eqalqplidd gftaaqaake eqsrptsqey
       61 vllprgsthr qrcdhavqcl lsclcdskll gphiaddlvf lsclrgsera grgfigmgnf
      121 lsclrgskrr gragarecgf lsclrgsklr ipdvpglavf lsclrgskrl vivappavpf
      181 lsclrgs
//
LOCUS       WP_235943707             375 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase [Uliginosibacterium aquaticum].
ACCESSION   WP_235943707
VERSION     WP_235943707.1
KEYWORDS    RefSeq.
SOURCE      Uliginosibacterium aquaticum
  ORGANISM  Uliginosibacterium aquaticum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Rhodocyclales; Zoogloeaceae; Uliginosibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017026.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05175.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Uliginosibacterium aquaticum"
                     /db_xref="taxon:2731212"
     Protein         1..375
                     /product="methyltransferase"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=40774
     Region          150..311
                     /region_name="RsmC"
                     /note="16S rRNA G1207 methylase RsmC [Translation,
                     ribosomal structure and biogenesis]; COG2813"
                     /db_xref="CDD:442062"
ORIGIN      
        1 mtpllhwsel gqprtsrwqs eaaaplptel rliddtlpaa eawrlaqagv sllwrgdwqn
       61 arhllqamsr radkqqsrpg kapatalqaf rqhrqqqatr aqtlarllie vdathsiqar
      121 raqdvtqacl eaygpvdtgy vvslrellgv vsahewrkkg vqvaalgdti hahygvfspl
      181 rgeyldliak aplpgkstaf digtgsgvia allakrgvaq ivatdmapra lacaadnlqr
      241 lgltnqvell qadlfppgqa klivcnppwl petptspvea avydpdsrml rgfladlpah
      301 lapggeawli isdiaellel rsreellgwi daaglhvinr ldtrpqhpka tdandplhaa
      361 rsrevtslwr lakaa
//
LOCUS       WP_235943788             348 aa            linear   BCT 02-MAR-2025
DEFINITION  OmpA family protein [Uliginosibacterium aquaticum].
ACCESSION   WP_235943788
VERSION     WP_235943788.1
KEYWORDS    RefSeq.
SOURCE      Uliginosibacterium aquaticum
  ORGANISM  Uliginosibacterium aquaticum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Rhodocyclales; Zoogloeaceae; Uliginosibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012894.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00691.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Uliginosibacterium aquaticum"
                     /db_xref="taxon:2731212"
     Protein         1..348
                     /product="OmpA family protein"
                     /calculated_mol_wt=38053
     Region          7..188
                     /region_name="OMP_b-brl"
                     /note="Outer membrane protein beta-barrel domain;
                     pfam13505"
                     /db_xref="CDD:463903"
     Region          <132..344
                     /region_name="PRK10808"
                     /note="outer membrane protein A; Reviewed"
                     /db_xref="CDD:236764"
ORIGIN      
        1 mtsavtavtl lscalaapaq aqgiyntpsg hdfnpswyia psingispdd kfgsddqggg
       61 lglrvgkplt hwldlqlgtt ysrahegsss yrqntlgvda lfllsrerfr pfllagggae
      121 ydkvnrpdls sngtspylnm glgaqysfns qwglqadyrh avsflqnndf gfdrghsniv
      181 tvallytfdk paapapiarn eappppppra ieapppapvp qrferytlss telfdfdsfv
      241 lrgsqpklde issvlnrdpa iesinilgyt drlgsdqynq klsqsraeav ksylisksvd
      301 arrlnavgkg ernpvvecsd kkradlikcl epnrrvevee ivlqrrvp
//
LOCUS       WP_235943843             334 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein
            [Uliginosibacterium aquaticum].
ACCESSION   WP_235943843
VERSION     WP_235943843.1
KEYWORDS    RefSeq.
SOURCE      Uliginosibacterium aquaticum
  ORGANISM  Uliginosibacterium aquaticum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Rhodocyclales; Zoogloeaceae; Uliginosibacterium.
REFERENCE   1  (residues 1 to 334)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Uliginosibacterium aquaticum"
                     /db_xref="taxon:2731212"
     Protein         1..334
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=36657
     Region          16..325
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(20,22..23,25,44..46,83..85,117..119,139,143,
                     170..173)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(96,119,139,143)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mdrnetagng empqralvlg asggvggela rellragwqv rglkrglgvp rllrdgiewl
       61 dgdalkeadv lsaaegcavi ahavnppgyr nwgelvlpml antlaaarqq gatillpgtv
      121 ynygpdtfpl iaedapqapi trkgairvel errlqaaaea gelrviivra gdffgpqarn
      181 swfsqgmlkp grvpsamqwp grpgvghqfa ylpdvartmr rllevrerlp afsrfnmagh
      241 wdpdgralaq avcrvlqrrg lavprlkafp wwlmrlaapf vttlrelldm rylwqtevrm
      301 tnarllevlg eephtpldea ieatlvgmgc laqr
//
LOCUS       WP_235944063             432 aa            linear   BCT 02-MAR-2025
DEFINITION  trypsin-like peptidase domain-containing protein [Variovorax
            boronicumulans].
ACCESSION   WP_235944063
VERSION     WP_235944063.1
KEYWORDS    RefSeq.
SOURCE      Variovorax boronicumulans
  ORGANISM  Variovorax boronicumulans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Variovorax.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024758.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13365.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Variovorax boronicumulans"
                     /db_xref="taxon:436515"
     Protein         1..432
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /calculated_mol_wt=44805
     Region          10..423
                     /region_name="degP_htrA_DO"
                     /note="periplasmic serine protease, Do/DeqQ family;
                     TIGR02037"
                     /db_xref="CDD:273938"
ORIGIN      
        1 mhaampwpvp glaalvkafg pavvhigver psvparrfsd rwllrappae tdesslgsgf
       61 lvsadglilt nahvvahgtq irvklpdrre frarliglda ladvallkid atglptvrig
      121 dpadvepgdg vaaigspygf gnsvtagivs akgrllpgae smqflqtdvp inpgnsggpl
      181 fnlrgevigi nsriysrsgg yqglsfaipi daamrikdql latgtvtrgr igvsvqevgq
      241 aladtfrlpr pagalvtdve prgaaarggl ktgdvilsvq grevvqaada lgfiaeqvpg
      301 qrarlvvwrd raehvvevkv egydtprlqs daaaaasvps rlgfavrpla paerqflrve
      361 ggllvqrvnv aasragvqpg dvilalngqp idsaealaqa legadgtaal lvqragarif
      421 vpicaqagsp kc
//
LOCUS       WP_235944098             295 aa            linear   BCT 02-MAR-2025
DEFINITION  Gp49 family protein [Variovorax boronicumulans].
ACCESSION   WP_235944098
VERSION     WP_235944098.1
KEYWORDS    RefSeq.
SOURCE      Variovorax boronicumulans
  ORGANISM  Variovorax boronicumulans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Variovorax.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13876.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Variovorax boronicumulans"
                     /db_xref="taxon:436515"
     Protein         1..295
                     /product="Gp49 family protein"
                     /calculated_mol_wt=31404
     Region          190..289
                     /region_name="Phage_gp49_66"
                     /note="Phage protein (N4 Gp49/phage Sf6 gene 66) family;
                     cl10351"
                     /db_xref="CDD:447898"
ORIGIN      
        1 msnplisptv grvawyypsl ltgeagftpp rdgeplaaiv ahvwndtmvn lavfdangta
       61 hsrtsvrlih edltgdrpse sfctwmpyqk gqaraaaaap apvgshaevv lypaireama
      121 elaqlpagfn fsvdrafnhl hsafwsevpa pastlqlrpl pplnetkays dgtsakgpgp
      181 lpeqspgqqd aaveqqlqak gktaprvtpd dlaanivdte ivkhvahsgq ilrwavlttr
      241 sgfavtgrps aavsaenddp eigvataien arnelwplmg yalkqrlhda skvqa
//
LOCUS       WP_235944178             355 aa            linear   BCT 02-MAR-2025
DEFINITION  MucB/RseB C-terminal domain-containing protein [Variovorax
            boronicumulans].
ACCESSION   WP_235944178
VERSION     WP_235944178.1
KEYWORDS    RefSeq.
SOURCE      Variovorax boronicumulans
  ORGANISM  Variovorax boronicumulans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Variovorax.
REFERENCE   1  (residues 1 to 355)
  AUTHORS   Kim,D.Y., Jin,K.S., Kwon,E., Ree,M. and Kim,K.K.
  TITLE     Crystal structure of RseB and a model of its binding mode to RseA
  JOURNAL   Proc Natl Acad Sci U S A 104 (21), 8779-8784 (2007)
   PUBMED   17496148
REFERENCE   2  (residues 1 to 355)
  AUTHORS   Martinez-Salazar,J.M., Moreno,S., Najera,R., Boucher,J.C.,
            Espin,G., Soberon-Chavez,G. and Deretic,V.
  TITLE     Characterization of the genes coding for the putative sigma factor
            AlgU and its regulators MucA, MucB, MucC, and MucD in Azotobacter
            vinelandii and evaluation of their roles in alginate biosynthesis
  JOURNAL   J Bacteriol 178 (7), 1800-1808 (1996)
   PUBMED   8606151
REFERENCE   3  (residues 1 to 355)
  AUTHORS   Martin,D.W., Schurr,M.J., Mudd,M.H. and Deretic,V.
  TITLE     Differentiation of Pseudomonas aeruginosa into the
            alginate-producing form: inactivation of mucB causes conversion to
            mucoidy
  JOURNAL   Mol Microbiol 9 (3), 497-506 (1993)
   PUBMED   8412698
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17188.9
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Variovorax boronicumulans"
                     /db_xref="taxon:436515"
     Protein         1..355
                     /product="MucB/RseB C-terminal domain-containing protein"
                     /calculated_mol_wt=39093
     Region          6..354
                     /region_name="RseB"
                     /note="negative regulator of sigma E activity [Signal
                     transduction mechanisms]; COG3026"
                     /db_xref="CDD:442262"
ORIGIN      
        1 mpisartlvl afavlclgqm ataqtrygaa ntksvpsaqt deppamgvte wlqrmhagar
       61 qrsyvgtfvv sapggdlssa riwhvrdgdh qleriealsg pprltfrrnr nvmtflpeak
      121 vvkvekrenl dlfpnlpdkp dssvgdyydv raigkdrvag fdadvvqlvp rdglrfgyri
      181 wserrsglvv klqtvdsdtr vveqsafsel qldapvkaqa laqmmantsg yriekleler
      241 staqdegwml rtpvagfkpr sffrrpalpa gdgkppkpea ttvqwtfsdg latvslfier
      301 ydpartpgdg vltigatnai rrrlpapasd wwltavgevp qqtlnafaqs lartr
//
LOCUS       WP_235944331              97 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Variovorax boronicumulans].
ACCESSION   WP_235944331
VERSION     WP_235944331.1
KEYWORDS    RefSeq.
SOURCE      Variovorax boronicumulans
  ORGANISM  Variovorax boronicumulans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Variovorax.
REFERENCE   1  (residues 1 to 97)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Variovorax boronicumulans"
                     /db_xref="taxon:436515"
     Protein         1..97
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=10984
     Region          <1..>78
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mrwnhpqlgl lqlihfvpll eedvlaeqvg ewgigtalrq lrdwcrtglr mpvsvnvssl
       61 hmmrhdfvdr ltqqlahypk lgsgalelel letttis
//
LOCUS       WP_235944356             395 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: substrate-binding domain-containing protein
            [Micromonospora].
ACCESSION   WP_235944356
VERSION     WP_235944356.1
KEYWORDS    RefSeq.
SOURCE      Micromonospora
  ORGANISM  Micromonospora
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13407.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Micromonospora"
                     /db_xref="taxon:1873"
     Protein         1..395
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=42354
     Region          93..386
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mkrhmaataa lllvslvgca tdepvatpsd gasappagag tgeqskffvq adydnelall
       61 daaptgpadk pweqvlnpkm vdtakfkkdg phkicfsnaa lnnpwrqvgf ktmqaeveaq
      121 gdrisefvhv daegkdqkqi adindllgks cdalivspnt tatltpavta acdaglpviv
      181 fdrgvdtdcp vtfinpiggy gfghvgaefv sqrmkpggkv lalrilpgvd vletrwsaak
      241 vafdkaqvdv vgveftdgdp aktkkivndy iqrhgtidgv wmdagavava aveafqdagq
      301 pvppingedq ldflkmwkde gltaiaptyp tyqwrtpiia alrildgqqv sdpwklpqpt
      361 itqenldsyl dpnmpplhya mcgctdlpgy pqrwk
//
LOCUS       WP_235944856             459 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase [Verrucosispora sioxanthis].
ACCESSION   WP_235944856
VERSION     WP_235944856.1
KEYWORDS    RefSeq.
SOURCE      Verrucosispora sioxanthis
  ORGANISM  Verrucosispora sioxanthis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1  (residues 1 to 459)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 459)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Verrucosispora sioxanthis"
                     /db_xref="taxon:2499994"
     Protein         1..459
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=47924
     Region          3..434
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mkilaldlgt ssvrglvldd aqplpgalar rrmvltvdde gagtldvray laglieclde
       61 lhgqgwldgv qlvavsgqwh svvplsatde plgpvltwld trpeppatav gpadpdafhq
      121 rtgtwwhrcy wsvrlpwlra rtgtriarft glveyvlgrl laeapmsmsq asgtglldlh
      181 tldwdpeara lagsdgadlp elapatgtag carstagggr rwpgplgaat gdgaasnvgs
      241 gcvdptraav tvgtssavrl lqrmptsags tvlphrlwry rvdhdhvvtg vayssggnlf
      301 awadrelrlp tgraleeala llppdggrpa nvrfggdrpp girpaglgel rglgfgttav
      361 emlaglmygv ceqvvedlvv lestvgrpve vvlgggaiaa stwwreafaa vlaprpvrfa
      421 rhpeigatga alvatgriad avvvadigrt ddqdsatsa
//
LOCUS       WP_235944921             261 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3152 domain-containing protein [Verrucosispora sioxanthis].
ACCESSION   WP_235944921
VERSION     WP_235944921.1
KEYWORDS    RefSeq.
SOURCE      Verrucosispora sioxanthis
  ORGANISM  Verrucosispora sioxanthis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11350.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Verrucosispora sioxanthis"
                     /db_xref="taxon:2499994"
     Protein         1..261
                     /product="DUF3152 domain-containing protein"
                     /calculated_mol_wt=27088
     Region          65..250
                     /region_name="ZnMc"
                     /note="Zinc-dependent metalloprotease. This super-family
                     of metalloproteases contains two major branches, the
                     astacin-like proteases and the adamalysin/reprolysin-like
                     proteases. Both branches have wide phylogenetic
                     distribution, and contain sub-families, which...; cl00064"
                     /db_xref="CDD:469599"
ORIGIN      
        1 mlvaavgaav amvaggtgvg sgaadevapv vsgpvvapss papvrtpspv avspspappv
       61 lrepgsrpst gpgrfgyddr agpvlgsagd lrryrvaves gagvdagefa lavrtalagp
      121 gswvdsgrlr lrqversarh dftvylatag tagrmcaagg vdirvggrpy tscrapgrvi
      181 inldrwrlsv phfveadvpl slyrtyvvnh evghelgnrh ercpgrgepa pvmmqqtlfl
      241 kgcvanpwpy ldgrryqgpp l
//
LOCUS       WP_235945171             317 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding oxidoreductase [Verrucosispora sioxanthis].
ACCESSION   WP_235945171
VERSION     WP_235945171.1
KEYWORDS    RefSeq.
SOURCE      Verrucosispora sioxanthis
  ORGANISM  Verrucosispora sioxanthis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1  (residues 1 to 317)
  AUTHORS   Lu,G., Campbell,W.H., Schneider,G. and Lindqvist,Y.
  TITLE     Crystal structure of the FAD-containing fragment of corn nitrate
            reductase at 2.5 A resolution: relationship to other flavoprotein
            reductases
  JOURNAL   Structure 2 (9), 809-821 (1994)
   PUBMED   7812715
REFERENCE   2  (residues 1 to 317)
  AUTHORS   Hyde,G.E., Crawford,N.M. and Campbell,W.H.
  TITLE     The sequence of squash NADH:nitrate reductase and its relationship
            to the sequences of other flavoprotein oxidoreductases. A family of
            flavoprotein pyridine nucleotide cytochrome reductases
  JOURNAL   J Biol Chem 266 (35), 23542-23547 (1991)
   PUBMED   1748631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013161.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00970.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Verrucosispora sioxanthis"
                     /db_xref="taxon:2499994"
     Protein         1..317
                     /product="FAD-binding oxidoreductase"
                     /calculated_mol_wt=33272
     Region          70..312
                     /region_name="FNR_like"
                     /note="Ferredoxin reductase (FNR), an FAD and NAD(P)
                     binding protein, was intially identified as a chloroplast
                     reductase activity, catalyzing the electron transfer from
                     reduced iron-sulfur protein ferredoxin to NADP+ as the
                     final step in the electron transport...; cl06868"
                     /db_xref="CDD:447143"
     Site            order(98,111..114,128..130,135..138,202)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99784"
     Site            order(111,113..114)
                     /site_type="other"
                     /note="conserved FAD binding motif [chemical binding]"
                     /db_xref="CDD:99784"
     Site            order(135,138,141,148)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99784"
     Site            order(197,201..204,206)
                     /site_type="other"
                     /note="beta-alpha-beta structure motif"
                     /db_xref="CDD:99784"
     Site            order(202..203,228..230,289..290)
                     /site_type="other"
                     /note="NAD binding pocket [chemical binding]"
                     /db_xref="CDD:99784"
ORIGIN      
        1 malltvlgrl hrryrlrrrs ligaalapva prlcpqpigw gvpvavdlga rraraagrmg
       61 dgpafwpaev vgrdlaaegi ailtvrpwlr lpfrpgqavp vcvpqhpgrw rwycpanapr
      121 pdgtvelhvr avpagtvshs lvhevrpndl lhlgppvdig lsmpavpepp paggpetasa
      181 kaapagagra tardlllvag gtglaplral veqvaaapdg rrvtlivgar tvadlydait
      241 ldkldqahpw lrvvpafshd pfvapaeqgd altvaldhyh pgqqvhvcgp aamldlargr
      301 ltaagipadg ihlpaiw
//
LOCUS       WP_235945263             176 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4442 domain-containing protein [Metallococcus carri].
ACCESSION   WP_235945263
VERSION     WP_235945263.1
KEYWORDS    RefSeq.
SOURCE      Metallococcus carri
  ORGANISM  Metallococcus carri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Dermacoccaceae; Metallococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025892.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14539.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Metallococcus carri"
                     /db_xref="taxon:1656884"
     Protein         1..176
                     /product="DUF4442 domain-containing protein"
                     /calculated_mol_wt=19980
     Region          18..156
                     /region_name="hot_dog"
                     /note="The hotdog fold was initially identified in the E.
                     coli FabA (beta-hydroxydecanoyl-acyl carrier protein
                     (ACP)-dehydratase) structure and subsequently in 4HBT
                     (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A
                     number of other seemingly unrelated...; cl00509"
                     /db_xref="CDD:469797"
     Site            order(64..65,99..102)
                     /site_type="active"
                     /note="active site 2 [active]"
                     /db_xref="CDD:239524"
     Site            order(70,73..74,77,91..93)
                     /site_type="active"
                     /note="active site 1 [active]"
                     /db_xref="CDD:239524"
ORIGIN      
        1 mtrrtsklgs rkhyqphqls rlmnffppll gmgirvreft pdwtvarvel klnrlnrnqh
       61 gtafggsiga msdafyalll mhqlgrdyyv wdqaaeityv spgvgtifgt fevpkerteq
      121 iraeaasgek vlpwfetelt lrdgtvvarv rrqlyvrrkk sateaaepme stnfeg
//
LOCUS       WP_235945445             222 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Metallococcus carri].
ACCESSION   WP_235945445
VERSION     WP_235945445.1
KEYWORDS    RefSeq.
SOURCE      Metallococcus carri
  ORGANISM  Metallococcus carri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Dermacoccaceae; Metallococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Metallococcus carri"
                     /db_xref="taxon:1656884"
     Protein         1..222
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=23744
     Region          23..189
                     /region_name="NUDIX_ADPRase_Rv1700"
                     /note="ADP-ribose pyrophosphatase from Mycobacterium
                     tuberculosis (Mt-ADPRase), and similar proteins; cd24158"
                     /db_xref="CDD:467606"
ORIGIN      
        1 mtesgmphgr lpadladrfa parvvsrsta fegrvwdvvt drvdlgaage vtrdyvqhpg
       61 avgvvamrga ggteevlliq qyrhpvgtyd wevpaglldv pgedpqaaaa relseeadla
      121 adtwhvlvdl ftspgglsen iryylardvk pcvatdfera geesdmptgw lplddavtaa
      181 lagrmhngpg iaallaaaaa rardwrdlrp adapwpvhpa yr
//
LOCUS       WP_235945474             388 aa            linear   BCT 02-MAR-2025
DEFINITION  FtsW/RodA/SpoVE family cell cycle protein [Thermaurantiacus
            tibetensis].
ACCESSION   WP_235945474
VERSION     WP_235945474.1
KEYWORDS    RefSeq.
SOURCE      Thermaurantiacus tibetensis
  ORGANISM  Thermaurantiacus tibetensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Thermaurantiacus.
REFERENCE   1  (residues 1 to 388)
  AUTHORS   Henriques,A.O., Glaser,P., Piggot,P.J. and Moran,C.P. Jr.
  TITLE     Control of cell shape and elongation by the rodA gene in Bacillus
            subtilis
  JOURNAL   Mol Microbiol 28 (2), 235-247 (1998)
   PUBMED   9622350
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013279.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01098.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Thermaurantiacus tibetensis"
                     /db_xref="taxon:2759035"
     Protein         1..388
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0051301 - cell division [Evidence IEA]"
                     /calculated_mol_wt=40924
     Region          <108..374
                     /region_name="FTSW_RODA_SPOVE"
                     /note="Cell cycle protein; cl00511"
                     /db_xref="CDD:469799"
ORIGIN      
        1 mgdllrlgra drsflarwfw tvdrpllfll lalmgfglia vaaaspaaal rlsdaatrip
       61 plfflerqll waalglalml avsmlekraa rtlalagall alvalaavpf igtdvngatr
      121 wiqlpgfqlq pvellkplfv vlsawllaar fddpslpvip lsagllalvv gllalqpdfg
      181 qaallmavwl amaalaglpl llvfgglglg lvglalayvt sphvarridg flhgegdtyq
      241 vdraldcfra gglfgtgpgd gtakfrlpea htdyvfavig eefgaiaafa lallylviil
      301 rvvlqlveed dpftllagag lalqfgaqaf inmsvnlala pskgmtlpfv shggssylat
      361 algmglllaf trrnrhvqas pylraqpa
//
LOCUS       WP_235945657             185 aa            linear   BCT 02-MAR-2025
DEFINITION  NINE protein [Metallococcus carri].
ACCESSION   WP_235945657
VERSION     WP_235945657.1
KEYWORDS    RefSeq.
SOURCE      Metallococcus carri
  ORGANISM  Metallococcus carri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Dermacoccaceae; Metallococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017007.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05154.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Metallococcus carri"
                     /db_xref="taxon:1656884"
     Protein         1..185
                     /product="NINE protein"
                     /calculated_mol_wt=19631
     Region          70..118
                     /region_name="GYF_2"
                     /note="GYF domain 2; pfam14237"
                     /db_xref="CDD:464112"
     Region          120..169
                     /region_name="TM2"
                     /note="TM2 domain; pfam05154"
                     /db_xref="CDD:428337"
ORIGIN      
        1 msndgyqgqp dpygqqngpy agpqsgdygk ppsqgvgegy gqpdaaaygg yddpqwgamq
       61 qpgpfndqff vsvmgreqgp idygqlqmma qskalapetf vrsasggtpf pakqipglfs
      121 dkewvtalll svflgtfgvd rfylgqtglg iaklltlggc giwhiidvil iamrnitdse
      181 grqls
//
LOCUS       WP_235945690             297 aa            linear   BCT 02-MAR-2025
DEFINITION  PHP domain-containing protein [Saccharibacillus alkalitolerans].
ACCESSION   WP_235945690
VERSION     WP_235945690.1
KEYWORDS    RefSeq.
SOURCE      Saccharibacillus alkalitolerans
  ORGANISM  Saccharibacillus alkalitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Saccharibacillus.
REFERENCE   1  (residues 1 to 297)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014826.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02811.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Saccharibacillus alkalitolerans"
                     /db_xref="taxon:2705290"
     Protein         1..297
                     /product="PHP domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=31784
     Region          14..274
                     /region_name="nside_bi_sphtase"
                     /note="3',5'-nucleoside bisphosphate phosphatase;
                     NF041577"
                     /db_xref="CDD:469462"
ORIGIN      
        1 mesmingkek aalydlhmhs tssdgmntsa elvrlaaerg lagvaltdhd tvagvseaaa
       61 eagkagldfv pgveistrag gkdihvlgyf vdpsdkrfle rlaglrdvrd rrndlilgkl
      121 relgvditle evkdrggrpl apgesvgrph madvlvrkgy aadlrdafdk ylaegaaayv
      181 spprispsea adwireaggv pvlahpglyg ddelvrtvls eakpagievr hpdhgpedee
      241 ryrklaaeyg llttagsdyh gvrqgkvfhg elggytvgaa averlrnlgm qgkrqle
//
LOCUS       WP_235945963             643 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Saccharibacillus alkalitolerans].
ACCESSION   WP_235945963
VERSION     WP_235945963.1
KEYWORDS    RefSeq.
SOURCE      Saccharibacillus alkalitolerans
  ORGANISM  Saccharibacillus alkalitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Saccharibacillus.
REFERENCE   1  (residues 1 to 643)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 643)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019348.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07728.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Saccharibacillus alkalitolerans"
                     /db_xref="taxon:2705290"
     Protein         1..643
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=72815
     Region          <58..588
                     /region_name="McrB"
                     /note="5-methylcytosine-specific restriction endonuclease
                     McrBC, GTP-binding regulatory subunit McrB [Defense
                     mechanisms]; COG1401"
                     /db_xref="CDD:441011"
     Region          251..>353
                     /region_name="COG4127"
                     /note="Predicted restriction endonuclease, Mrr-cat
                     superfamily [General function prediction only]"
                     /db_xref="CDD:443303"
ORIGIN      
        1 mneqailrrn efekwmlnkk qgngrpyapk tisdyavala gaakklkeas alettnmfei
       61 geydryvkvk aiittaegfe eidrkartqd ftqglkfyke fledkehaam tesarsnsse
      121 eayhdkniil ygppgtgkty htviyavami enkplqdive eagadggyeq vktrydkyka
      181 agqivfttfh qsygyeefme gikpvmanae etgadsgdis ykiepgifkr fcekagepiv
      241 aadndygire epviwkvslg dskdkgvikr ycyehgmirl gwdeygenvn eatvyanggk
      301 gvinafvnem qqgdivlvlk dekhigaigv vagdyewred ldsykrtrkv nwllkgddvn
      361 invvemnggv kltlssvyrl hrvtlnnvls ilqehqaalp qsvarenpnn yvfiidevnr
      421 gniskifgel itliepskrl gmreatslql pysgelfgvp nnvyllatmn tadrsiarld
      481 talrrrfafa emmprpqlls slqidgtgld lekmldminr riealydreh mlghayflgl
      541 kneptleklg qlfehavipl lqeyfyddye kirlvlgdnr kaderdrfit evainandlf
      601 gsggdryade rktyrinaea fkreeayrgi yenrsaanaa vqp
//
LOCUS       WP_235945990              57 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Saccharibacillus
            alkalitolerans].
ACCESSION   WP_235945990
VERSION     WP_235945990.1
KEYWORDS    RefSeq.
SOURCE      Saccharibacillus alkalitolerans
  ORGANISM  Saccharibacillus alkalitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Saccharibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024059.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12645.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..57
                     /organism="Saccharibacillus alkalitolerans"
                     /db_xref="taxon:2705290"
     Protein         1..57
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=6594
     Region          2..49
                     /region_name="HTH_16"
                     /note="Helix-turn-helix domain; pfam12645"
                     /db_xref="CDD:463654"
ORIGIN      
        1 msllersrsg dsealrkvve llepdierls rrmrmereda kqtlrtelig lvlgerr
//
LOCUS       WP_235945658              99 aa            linear   BCT 02-MAR-2025
DEFINITION  S4 domain-containing protein [Thermaurantiacus tibetensis].
ACCESSION   WP_235945658
VERSION     WP_235945658.1
KEYWORDS    RefSeq.
SOURCE      Thermaurantiacus tibetensis
  ORGANISM  Thermaurantiacus tibetensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Thermaurantiacus.
REFERENCE   1  (residues 1 to 99)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Novel predicted RNA-binding domains associated with the translation
            machinery
  JOURNAL   J Mol Evol 48 (3), 291-302 (1999)
   PUBMED   10093218
REFERENCE   2  (residues 1 to 99)
  AUTHORS   Davies,C., Gerstner,R.B., Draper,D.E., Ramakrishnan,V. and
            White,S.W.
  TITLE     The crystal structure of ribosomal protein S4 reveals a two-domain
            molecule with an extensive RNA-binding surface: one domain shows
            structural homology to the ETS DNA-binding motif
  JOURNAL   EMBO J 17 (16), 4545-4558 (1998)
   PUBMED   9707415
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013633.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01479.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Thermaurantiacus tibetensis"
                     /db_xref="taxon:2759035"
     Protein         1..99
                     /product="S4 domain-containing protein"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /calculated_mol_wt=10838
     Region          4..>87
                     /region_name="HslR"
                     /note="Ribosomal 50S subunit-recycling heat shock protein,
                     contains S4 domain [Translation, ribosomal structure and
                     biogenesis]; COG1188"
                     /db_xref="CDD:440801"
ORIGIN      
        1 mvhgpglrld kwlwyarlaa srsdaqalce srrlrldgrv idrsctrvrp gnvlafprgd
       61 qvialrveal adrrgpfaea rqlytllmgd gapalpkaa
//
LOCUS       WP_235946010             119 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Thermaurantiacus
            tibetensis].
ACCESSION   WP_235946010
VERSION     WP_235946010.1
KEYWORDS    RefSeq.
SOURCE      Thermaurantiacus tibetensis
  ORGANISM  Thermaurantiacus tibetensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Thermaurantiacus.
REFERENCE   1  (residues 1 to 119)
  AUTHORS   Fujikawa,N., Kurumizaka,H., Nureki,O., Terada,T., Shirouzu,M.,
            Katayama,T. and Yokoyama,S.
  TITLE     Structural basis of replication origin recognition by the DnaA
            protein
  JOURNAL   Nucleic Acids Res 31 (8), 2077-2086 (2003)
   PUBMED   12682358
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019903.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08299.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Thermaurantiacus tibetensis"
                     /db_xref="taxon:2759035"
     Protein         1..119
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /GO_process="GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /calculated_mol_wt=13429
     Region          24..108
                     /region_name="Bac_DnaA_C"
                     /note="C-terminal domain of bacterial DnaA proteins. The
                     DNA-binding C-terminal domain of DnaA contains a
                     helix-turn-helix motif that specifically interacts with
                     the DnaA box, a 9-mer motif that occurs repetitively in
                     the replication origin oriC. Multiple...; cd06571"
                     /db_xref="CDD:119330"
     Site            order(46,54..55,62,68..70,80..84,87,90..91)
                     /site_type="other"
                     /note="DnaA box-binding interface [nucleotide binding]"
                     /db_xref="CDD:119330"
ORIGIN      
        1 msapdvlelr perrvapmwv ptrdlivmev aeafgvpadl vvsrrmlrea vearfacvwv
       61 adrvtawsst qmgrrlfggr dhttilhara raealhatdr ewrraaeral amvmeafdd
//
LOCUS       WP_235946019             220 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Saccharibacillus
            alkalitolerans].
ACCESSION   WP_235946019
VERSION     WP_235946019.1
KEYWORDS    RefSeq.
SOURCE      Saccharibacillus alkalitolerans
  ORGANISM  Saccharibacillus alkalitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Saccharibacillus.
REFERENCE   1  (residues 1 to 220)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 220)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 220)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 220)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Saccharibacillus alkalitolerans"
                     /db_xref="taxon:2705290"
     Protein         1..220
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=25105
     Region          2..220
                     /region_name="CcmA"
                     /note="ABC-type multidrug transport system, ATPase
                     component [Defense mechanisms]; COG1131"
                     /db_xref="CDD:440746"
ORIGIN      
        1 mdridltleg grvygllgin gagkttllht icglnrrfsg gfrmsevain pesdegdwfr
       61 vkcerylaad spvlfgeltm rqyaefvhkl yrrsfeegel velarqfhce ayldrtigel
      121 slgnkqktvl mtglllntpl fildeplvgl dvesievfyd kireycqrgg svlfsshlle
      181 ivqrfcqsvf ildrkkialh vpvdsntdlh riffevvrhe
//
LOCUS       WP_235945995             226 aa            linear   BCT 02-MAR-2025
DEFINITION  Na-translocating system protein MpsC family protein
            [Saccharibacillus alkalitolerans].
ACCESSION   WP_235945995
VERSION     WP_235945995.1
KEYWORDS    RefSeq.
SOURCE      Saccharibacillus alkalitolerans
  ORGANISM  Saccharibacillus alkalitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Saccharibacillus.
REFERENCE   1  (residues 1 to 226)
  AUTHORS   Mayer,S., Steffen,W., Steuber,J. and Gotz,F.
  TITLE     The Staphylococcus aureus NuoL-like protein MpsA contributes to the
            generation of membrane potential
  JOURNAL   J Bacteriol 197 (5), 794-806 (2015)
   PUBMED   25448817
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021568.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10057.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Saccharibacillus alkalitolerans"
                     /db_xref="taxon:2705290"
     Protein         1..226
                     /product="Na-translocating system protein MpsC family
                     protein"
                     /calculated_mol_wt=26355
     Region          17..114
                     /region_name="MpsC"
                     /note="Na+-translocating membrane potential-generating
                     system (MpsC); cl02390"
                     /db_xref="CDD:470562"
ORIGIN      
        1 mmnkkdqikl itghagrllr srfgkgpevl gvalddrsvv lhfkgflnpm edvllaekee
       61 ktlryarelm mkslvpelqt ffeealgfrq tkvfydwnld dasgvivalf eqelstvrdy
      121 egkeevhrqt vevltktqak pstieswwvd prtllifrrg iaillekeln nlgytdvmkt
      181 akrkvekrll wqdarygrav rrplqdlyid wdfdrddsii vcrfdv
//
LOCUS       WP_235945997             226 aa            linear   BCT 02-MAR-2025
DEFINITION  Na-translocating system protein MpsC family protein
            [Saccharibacillus alkalitolerans].
ACCESSION   WP_235945997
VERSION     WP_235945997.1
KEYWORDS    RefSeq.
SOURCE      Saccharibacillus alkalitolerans
  ORGANISM  Saccharibacillus alkalitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Saccharibacillus.
REFERENCE   1  (residues 1 to 226)
  AUTHORS   Mayer,S., Steffen,W., Steuber,J. and Gotz,F.
  TITLE     The Staphylococcus aureus NuoL-like protein MpsA contributes to the
            generation of membrane potential
  JOURNAL   J Bacteriol 197 (5), 794-806 (2015)
   PUBMED   25448817
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021568.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10057.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Saccharibacillus alkalitolerans"
                     /db_xref="taxon:2705290"
     Protein         1..226
                     /product="Na-translocating system protein MpsC family
                     protein"
                     /calculated_mol_wt=26050
     Region          14..115
                     /region_name="MpsC"
                     /note="Na+-translocating membrane potential-generating
                     system (MpsC); cl02390"
                     /db_xref="CDD:470562"
ORIGIN      
        1 mmneketisl vtsyvgkllr nrfgkgpeav nvflcerciv fhlrnfmgpv ekflltqeee
       61 kafrytrell mesllpelkv flqenadlnv sefyydwgvh nasgaivgmf gsaldsqedy
      121 pgkedvhekv vnvtaaiqki pehidswwvt pkmlavfrqg itvllekemv elgytevlka
      181 tkrrlekrml eqdanagail nkkltdlyad wdfdrdrsvv iyifqe
//
LOCUS       WP_235946222             143 aa            linear   BCT 02-MAR-2025
DEFINITION  AbrB/MazE/SpoVT family DNA-binding domain-containing protein
            [Saccharibacillus alkalitolerans].
ACCESSION   WP_235946222
VERSION     WP_235946222.1
KEYWORDS    RefSeq.
SOURCE      Saccharibacillus alkalitolerans
  ORGANISM  Saccharibacillus alkalitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Saccharibacillus.
REFERENCE   1  (residues 1 to 143)
  AUTHORS   Mate,M.J., Vincentelli,R., Foos,N., Raoult,D., Cambillau,C. and
            Ortiz-Lombardia,M.
  TITLE     Crystal structure of the DNA-bound VapBC2 antitoxin/toxin pair from
            Rickettsia felis
  JOURNAL   Nucleic Acids Res 40 (7), 3245-3258 (2012)
   PUBMED   22140099
REFERENCE   2  (residues 1 to 143)
  AUTHORS   Hamon,M.A., Stanley,N.R., Britton,R.A., Grossman,A.D. and
            Lazazzera,B.A.
  TITLE     Identification of AbrB-regulated genes involved in biofilm
            formation by Bacillus subtilis
  JOURNAL   Mol Microbiol 52 (3), 847-860 (2004)
   PUBMED   15101989
REFERENCE   3  (residues 1 to 143)
  AUTHORS   Kamada,K., Hanaoka,F. and Burley,S.K.
  TITLE     Crystal structure of the MazE/MazF complex: molecular bases of
            antidote-toxin recognition
  JOURNAL   Mol Cell 11 (4), 875-884 (2003)
   PUBMED   12718874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015947.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04014.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Saccharibacillus alkalitolerans"
                     /db_xref="taxon:2705290"
     Protein         1..143
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=15997
     Region          1..>55
                     /region_name="AbrB"
                     /note="Bifunctional DNA-binding transcriptional regulator
                     of stationary/sporulation/toxin gene expression and
                     antitoxin component of the YhaV-PrlF toxin-antitoxin
                     module [Transcription, Defense mechanisms]; COG2002"
                     /db_xref="CDD:441605"
     Region          89..>137
                     /region_name="HTH_XRE"
                     /note="Helix-turn-helix XRE-family like proteins.
                     Prokaryotic DNA binding proteins belonging to the
                     xenobiotic response element family of transcriptional
                     regulators; cl22854"
                     /db_xref="CDD:473980"
ORIGIN      
        1 mirsldslgr ivipseirgt rnieigdsle ffvtddgmlv mrkyksteca fcrtldsvvy
       61 ykdqfvcgsc leelkhapav pvhhaptvee saskkrvrvs dmlprleqal idhpeasqse
      121 iaqmlgisqs rvsqlkkqlk yka
//
LOCUS       WP_235946348             154 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Saccharibacillus alkalitolerans].
ACCESSION   WP_235946348
VERSION     WP_235946348.1
KEYWORDS    RefSeq.
SOURCE      Saccharibacillus alkalitolerans
  ORGANISM  Saccharibacillus alkalitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Saccharibacillus.
REFERENCE   1  (residues 1 to 154)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 154)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Saccharibacillus alkalitolerans"
                     /db_xref="taxon:2705290"
     Protein         1..154
                     /product="VOC family protein"
                     /calculated_mol_wt=17294
     Region          13..148
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mttdhrmill eavpflslng rgaeaiefye kmldaevllk vsyadmakmd etfrfqtgqe
       61 syithsvlqi ganklmiaee emdntrpwsa gndfslciqs rdhetivriy erltadertt
      121 viaplaansf ssgygavrdp fgvvfqftvt rhaf
//
LOCUS       WP_235946569             501 aa            linear   BCT 02-MAR-2025
DEFINITION  RagB/SusD family nutrient uptake outer membrane protein
            [Flavobacterium silvaticum].
ACCESSION   WP_235946569
VERSION     WP_235946569.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium silvaticum
  ORGANISM  Flavobacterium silvaticum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 501)
  AUTHORS   Goulas,T., Garcia-Ferrer,I., Hutcherson,J.A., Potempa,B.A.,
            Potempa,J., Scott,D.A. and Gomis-Ruth,F.X.
  TITLE     Structure of RagB, a major immunodominant outer-membrane surface
            receptor antigen of Porphyromonas gingivalis
  JOURNAL   Mol Oral Microbiol 31 (6), 472-485 (2016)
   PUBMED   26441291
REFERENCE   2  (residues 1 to 501)
  AUTHORS   Bolam,D.N. and Koropatkin,N.M.
  TITLE     Glycan recognition by the Bacteroidetes Sus-like systems
  JOURNAL   Curr Opin Struct Biol 22 (5), 563-569 (2012)
   PUBMED   22819666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07980.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Flavobacterium silvaticum"
                     /db_xref="taxon:1852020"
     Protein         1..501
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /calculated_mol_wt=56442
     Region          39..463
                     /region_name="SusD"
                     /note="starch binding outer membrane protein SusD;
                     cl21747"
                     /db_xref="CDD:451378"
ORIGIN      
        1 mmkikltatl fvsalflfsc tdldedlydr vpdtefgntp aevqalvgga ysslrgfndg
       61 itisyptsef vfflnevssd ecviptrgtd wydggvyqql qmhdfradnp kilsawrycy
      121 qgiakinsii yqversglse earlpiyael kairayyyym lldmfgnvpl vtdfndltlp
      181 stssrqevyn fvesewqnal pylasgvvys kftknvvysl larlylnsqa fvgvarwqdc
      241 lnmcqnvsgy tlapdffqnf atenqtspei ilsipydska gtlgnymssm sahymhrftl
      301 satgdypwsa ngmsaepgvy ssftetdrrr ecmligdqis latgsvivmd sgqpltytee
      361 igdftnalqn egvrlgkyem kagetwerdh dlvlvryaei lmmqaecyvr lgspdlatpl
      421 vqqiatragv dmpatidldf inkellreft feghrrtdni rlgtffqpnw nqpatepfka
      481 ifpipstvlq antnlsqnpg y
//
LOCUS       WP_235946632             399 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Paenibacillus glycinis].
ACCESSION   WP_235946632
VERSION     WP_235946632.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycinis
  ORGANISM  Paenibacillus glycinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Paenibacillus glycinis"
                     /db_xref="taxon:2697035"
     Protein         1..399
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=43450
     Region          20..379
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(27..28,31..32,35,68,116..117,119..121,124,150,
                     153..154,157,225,227..229,232,259,263,312..313,317,321,
                     336,339..340,343..344,347)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mmpiirdvrt fisipgarkl lailffygig tgilapmnav yldesiglsk eqivavfavs
       61 lfcnvvitit vgwisdrlkn kkrlpllaai lcmiglfiym nasgfrsall gmtiavapsg
      121 limgqlfgma rnhffrragd ivemaqlwlr asfsvgffmg lllganifvl atfngvlwgn
      181 magyaclavl llsyeettdv pgakppange pfslvmlval lllscadavr glylqlvvlk
      241 lfgkpeimsy iwstqavfel lfmtlggywa arygskkimf lagcfalaay ltytrssslp
      301 vffavqplys ffvsilygva mgyvqrmfls rtgfgaslyv fisqtaslig yflplfvhgi
      361 tpniffipsa lvalslviig avlyrergas srrsmdaag
//
LOCUS       WP_235946694             193 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Nocardia terrae].
ACCESSION   WP_235946694
VERSION     WP_235946694.1
KEYWORDS    RefSeq.
SOURCE      Nocardia terrae
  ORGANISM  Nocardia terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024954.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13565.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Nocardia terrae"
                     /db_xref="taxon:2675851"
     Protein         1..193
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=22142
     Region          5..>165
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 mveyryravc evlggspige vaarfgtsrq sldtwrnrfr qegiagladr srrprtspar
       61 vatdvealic qlrqehprwg arrisyelar rhdipapara tihrilvrng lvnqqvqqhk
      121 rvyrrwqrqe pmhlwqldiv ggvpladdrs cklitgiddh srfvvistvl atpsareavg
      181 rrhrgwrcrs adr
//
LOCUS       WP_235946670             449 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Nocardia terrae].
ACCESSION   WP_235946670
VERSION     WP_235946670.1
KEYWORDS    RefSeq.
SOURCE      Nocardia terrae
  ORGANISM  Nocardia terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Nocardia terrae"
                     /db_xref="taxon:2675851"
     Protein         1..449
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47597
     Region          14..417
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(24..25,28..29,32,67,125..126,128..130,133,153,
                     156..157,160,243,246..247,250..252,255,283,287,338..339,
                     343,347,363,366..367,370..371,374)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340924"
ORIGIN      
        1 mestrtgfpl rrsvaasamg natewfdygv yaatagylts affpgelgtl gtmlgfaisf
       61 alrplggmvw gplgdrigrk avlattillm svatgaigll pthatagvla pillitlrvv
      121 qgfstggeyg gaatylaeca qdrkrgflgs flefgtlagf vggsavvlac qlvlgsdamy
      181 aggwripfll avplgltgwy lrakldespv ftelcegert ppaglrevlt tyrrelltli
      241 glvvalnvvn ytlltyqpty lqhtlgvges tttammligq lvmmvslpff grlsdrvgrr
      301 plwlvsllgl tvfavpmywl mgrgivwavl gfvilgllyv pqlstisstf paifpthvry
      361 agfalgynvs taafggtapl ineaviehtg wtlfpavymv aasligliac aylretagts
      421 lhgteipeae tdradepvpv eipvrgsga
//
LOCUS       WP_235946636             422 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase 87 family protein [Nocardia terrae].
ACCESSION   WP_235946636
VERSION     WP_235946636.1
KEYWORDS    RefSeq.
SOURCE      Nocardia terrae
  ORGANISM  Nocardia terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 422)
  AUTHORS   Birch,H.L., Alderwick,L.J., Bhatt,A., Rittmann,D., Krumbach,K.,
            Singh,A., Bai,Y., Lowary,T.L., Eggeling,L. and Besra,G.S.
  TITLE     Biosynthesis of mycobacterial arabinogalactan: identification of a
            novel alpha(1-->3) arabinofuranosyltransferase
  JOURNAL   Mol Microbiol 69 (5), 1191-1206 (2008)
   PUBMED   18627460
REFERENCE   2  (residues 1 to 422)
  AUTHORS   Morita,Y.S., Sena,C.B., Waller,R.F., Kurokawa,K., Sernee,M.F.,
            Nakatani,F., Haites,R.E., Billman-Jacobe,H., McConville,M.J.,
            Maeda,Y. and Kinoshita,T.
  TITLE     PimE is a polyprenol-phosphate-mannose-dependent
            mannosyltransferase that transfers the fifth mannose of
            phosphatidylinositol mannoside in mycobacteria
  JOURNAL   J Biol Chem 281 (35), 25143-25155 (2006)
   PUBMED   16803893
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021134.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09594.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Nocardia terrae"
                     /db_xref="taxon:2675851"
     Protein         1..422
                     /product="glycosyltransferase 87 family protein"
                     /GO_function="GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=45365
     Region          39..405
                     /region_name="PMT_2"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; cl21590"
                     /db_xref="CDD:473917"
ORIGIN      
        1 mittrsgqrn llrnlktegr gglpripili glllalaitv lfsalhgfld lqvyrvdtrg
       61 wlehgtlygp tlpvaghtdl pftyppsaav lmiplaimpl wlaeflvtas slaclgvtlw
      121 lvlsrvrpdl dagtkstlsm aavvvalaie pvrttlwfgq inlvlmaava ldcltekprw
      181 prglligvaa vtkltpaafv lyflirrdwk aagtsaataa gvigagfllf presrdywlh
      241 aivdtnrigs pdyvgnqslk gmvfrvgvpq sattavwlgl alvvvcagav lmnhlvrtea
      301 artdsgaptp vtvlsvtall vnaavlllis pvswthhwvw vapalvtaia wttanprfap
      361 yatiaafalf fligpglvpn gkhrelnwaw wqhlagdvyi iatvalllva lgrllqlrls
      421 rs
//
LOCUS       WP_235946873             297 aa            linear   BCT 02-MAR-2025
DEFINITION  terpene synthase family protein [Nocardia terrae].
ACCESSION   WP_235946873
VERSION     WP_235946873.1
KEYWORDS    RefSeq.
SOURCE      Nocardia terrae
  ORGANISM  Nocardia terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040195.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19086.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Nocardia terrae"
                     /db_xref="taxon:2675851"
     Protein         1..297
                     /product="terpene synthase family protein"
                     /calculated_mol_wt=32233
     Region          3..>182
                     /region_name="selin_dien_syn"
                     /note="selina-4(15),7(11)-diene synthase; NF041565"
                     /db_xref="CDD:469450"
ORIGIN      
        1 mveaieadsi gwlaghsvms aerltrfrag apgalgsyty prgtragtql asdfitwlfa
       61 fddlycdgnr lgsdpvgfsa vigdliqvle aprsvssgef pimralrdlh ervaamgsav
      121 qrqrwvadte ryllaklwea grrqarslpp lnsythmrrl gganvaclml tdvslgrevp
      181 aeimcarpmt ellqaaadla dldndllsya resgpeeefp ingvtaavlh gapdlaaatr
      241 avvefrnarm rtllelseyf aepaesaaad fsrgvcdwvs ghigwivksg rysrlpa
//
LOCUS       WP_235947078             480 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase family 39 protein, partial [Candidatus Frankia
            alpina].
ACCESSION   WP_235947078
VERSION     WP_235947078.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024629.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13231.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         <1..480
                     /product="glycosyltransferase family 39 protein"
                     /EC_number="2.4.-.-"
ORIGIN      
        1 dgldgldgld gptpvddgrl snqmvqhppl iyaagavllr alpgsgdway dqqvfvlrll
       61 nilivaplpl lawlaarrfg lgepsalaaa alplaipgft rvgatfnndg ilmlttgglt
      121 vvlagvlrgd lrrrtalwag lwlglallsk afaltlpami vaaylvgwwr rdaeaagsgv
      181 glwrrlraav asmpwipall avglglalgg wwwvrnylly davqpngwat npprreplll
      241 pdsfltwfwy ffrtmisrfw gglgmfeppq lspiaivlat vavvglcmta vtgrrragra
      301 ewslqaaavv vlllpvafay levgqrswae yqrytrgiav qgrylylglv glgvvvalgl
      361 rwalpgrerl aplvllvgal lmqgaallai csyywlprrv sftparipdv vsaigrwapf
      421 pvgvtiavfv ltalllagti aaagtqarrq gsaappvgsg prrgdgdagv vaqhepvrlg
//
LOCUS       WP_235947245             266 aa            linear   BCT 02-MAR-2025
DEFINITION  enoyl-CoA hydratase-related protein [Candidatus Frankia alpina].
ACCESSION   WP_235947245
VERSION     WP_235947245.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012596.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00378.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..266
                     /product="enoyl-CoA hydratase-related protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=27051
     Region          15..261
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     Site            order(34,36,68,72..76,112,114..116,138..139,142)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(74,116)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(96,104,125..128,140..143,149,151..153,155..156,
                     161..162,164..165,167..168,171,182,185,201,204..205)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
ORIGIN      
        1 msvitaeeaa vssqieseia dgvltvriar pdkrnaltqa mytalaeafa ageadagvri
       61 irirgsggsf tagndladfl atadlapdgp tltfirtvar gtkllvaevd gpavgigttl
      121 llhcdlvyat erstlgipfv nlgvvpefgs slllprrvgp aaaarlayfg epfgaaqaad
      181 lgivtevlpd adalrarvdd rvaallaqpp galaatrall hdggtapvla ridaegaifa
      241 erlasaeaka amtarlpgra assrtg
//
LOCUS       WP_235947268            1022 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-galactosidase [Paenibacillus glycinis].
ACCESSION   WP_235947268
VERSION     WP_235947268.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycinis
  ORGANISM  Paenibacillus glycinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013469.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01301.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Paenibacillus glycinis"
                     /db_xref="taxon:2697035"
     Protein         1..1022
                     /product="beta-galactosidase"
                     /EC_number="3.2.1.23"
                     /calculated_mol_wt=108918
     Region          17..327
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
     Region          750..>851
                     /region_name="LacZ"
                     /note="Beta-galactosidase/beta-glucuronidase [Carbohydrate
                     transport and metabolism]; COG3250"
                     /db_xref="CDD:442481"
ORIGIN      
        1 mnmetkhgpt lqlnasslri ggraeiilca slfyfripra lwrerldqvk afgynaidvy
       61 fpwnhhelee grwdfagerd aeaflqlaae aglwvvarpg pyicsewdgg glpaylfakp
      121 dmiirsadpr ymeavekwys rilpllarye lnrggtvicv qleneldfyd cpdpaayvag
      181 lrdmahgsgi gvpliacagq gglyeasgfa egvvptcnfy pndrdpafeh kvaayearla
      241 asnlpllvte tnrshfllrr llscgakllg pylqasgtnf gftngtnnwg dplafmtsdy
      301 dfrgmispeg hvrqeayegr llrrvirayg dalaeaatap asgiarlarg peaeapatdi
      361 arlapgpeae apvtapastg ldsrveadap vteglaqsae ptaptaessg larsdsgpke
      421 ggshlerqlr laggghllfl anvgdeaesv slilaqggge tvvpqtsrlr sipgrcailp
      481 vavplglwgv ggtlryatae lsdvrrsegr tamvfhaaer egeialalap gaavgeaanm
      541 saqatedgfv fvfraeagqi ascrialadg qrlelfglar edalllgsig edgslafeap
      601 laydaeprel nvswtsavld ptrpmsaepa lpaaeatfle rngiyrgfaw yeanvgapag
      661 ipvhgllvrq gsdvvslyad sayigtctpg ggsrympaeg iggsrrlaar aeiwghtnfd
      721 dprlpglrln smkgltglta vtgkqrltsn wrvrrvhara iqpellgpdc ddaawpvvgf
      781 ggwlspdhpa feyyrrrfaa srtadsftlh fqgiqalaev yvngrsagav hpfdpyvdit
      841 ahvrpgeetl vtvflervlg lpagevtlye gnvsrdwrls acdeaglleh aqrrkagaaa
      901 aelpislaag gvawlygalp deargmaggw rvqaagagmk ltvllggtvv grlwtdggan
      961 asrpvlsggd prsfylpgpw lreaardlai lleaveagai srldrlifap agepakqnsg
     1021 eg
//
LOCUS       WP_235947280             123 aa            linear   BCT 02-MAR-2025
DEFINITION  limonene-1,2-epoxide hydrolase family protein [Nocardia terrae].
ACCESSION   WP_235947280
VERSION     WP_235947280.1
KEYWORDS    RefSeq.
SOURCE      Nocardia terrae
  ORGANISM  Nocardia terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 123)
  AUTHORS   Arand,M., Hallberg,B.M., Zou,J., Bergfors,T., Oesch,F., van der
            Werf,M.J., de Bont,J.A., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Rhodococcus erythropolis limonene-1,2-epoxide
            hydrolase reveals a novel active site
  JOURNAL   EMBO J 22 (11), 2583-2592 (2003)
   PUBMED   12773375
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019473.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07858.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Nocardia terrae"
                     /db_xref="taxon:2675851"
     Protein         1..123
                     /product="limonene-1,2-epoxide hydrolase family protein"
                     /calculated_mol_wt=13512
     Region          1..118
                     /region_name="LimA"
                     /note="Limonene-1,2-epoxide hydrolase LimA/EphG [Secondary
                     metabolites biosynthesis, transport and catabolism];
                     COG4308"
                     /db_xref="CDD:443449"
ORIGIN      
        1 mspaavvtal caewrtgtpe siaeffteda vyhnipmepf vgraailefl rgfigtfggi
       61 dfdihhqavt gtivmnertd rfslgdkqie lpvtgvfevr dgriaawrdy fdmapftalq
      121 qga
//
LOCUS       WP_235947286             467 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase [Candidatus Frankia alpina].
ACCESSION   WP_235947286
VERSION     WP_235947286.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..467
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=44771
     Region          40..377
                     /region_name="T7SS_mycosin"
                     /note="type VII secretion-associated serine protease
                     mycosin; TIGR03921"
                     /db_xref="CDD:274856"
ORIGIN      
        1 maavlallvg salgvpllaa pataaapapa qgsqwyhavl glaqaqrirq gagvvvavid
       61 ggvdadhpkl rgqvlpgagv gpeaapdgrr dddpdghgta maglisgrnd ngppevrgia
      121 paarilpist gaeadsteva rgihlavdlg adiinlslgs lgtatpdere avayafahdv
      181 vvvasagnae tgdrrpttge inspanipgv vavtgstarg gfwrgsslga raviaapapg
      241 irapvptrvs pdgldtgagt snsativsgv valirsarpd ldapnvinrl iatardagpp
      301 grdiefgfgi vdpgaaltrp vsvvatnpll atptrsggsg gggglgspaa asagpptgtd
      361 graapadgaa splgaaadas adpggpaaad ggpgqgrdgt aataaggpaa gggpgrgspg
      421 hrgvarvtla wvgglalavw sggligvgah llstrrtttg rrshghs
//
LOCUS       WP_235947326             120 aa            linear   BCT 02-MAR-2025
DEFINITION  FAS1-like dehydratase domain-containing protein [Candidatus Frankia
            alpina].
ACCESSION   WP_235947326
VERSION     WP_235947326.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 120)
  AUTHORS   Singh,K., Bunzel,G., Graf,B., Yip,K.M., Neumann-Schaal,M., Stark,H.
            and Chari,A.
  TITLE     Reconstruction of a fatty acid synthesis cycle from acyl carrier
            protein and cofactor structural snapshots
  JOURNAL   Cell 186 (23), 5054-5067 (2023)
   PUBMED   37949058
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024844.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13452.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..120
                     /product="FAS1-like dehydratase domain-containing protein"
                     /calculated_mol_wt=12387
ORIGIN      
        1 meddltvspd vlaalvravg spagaataal vpyfgaavgg estavdglgl dlsrallagi
       61 dydwrrpfap gervhvrvtv edvfrkganq fgllaaeftd aagdlvqrqt vtfiergsgk
//
LOCUS       WP_235947370             459 aa            linear   BCT 02-MAR-2025
DEFINITION  oligosaccharide flippase family protein [Candidatus Frankia
            alpina].
ACCESSION   WP_235947370
VERSION     WP_235947370.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 459)
  AUTHORS   Yao,Z. and Valvano,M.A.
  TITLE     Genetic analysis of the O-specific lipopolysaccharide biosynthesis
            region (rfb) of Escherichia coli K-12 W3110: identification of
            genes that confer group 6 specificity to Shigella flexneri
            serotypes Y and 4a
  JOURNAL   J Bacteriol 176 (13), 4133-4143 (1994)
   PUBMED   7517390
REFERENCE   2  (residues 1 to 459)
  AUTHORS   Becker,A., Kleickmann,A., Kuster,H., Keller,M., Arnold,W. and
            Puhler,A.
  TITLE     Analysis of the Rhizobium meliloti genes exoU, exoV, exoW, exoT,
            and exoI involved in exopolysaccharide biosynthesis and nodule
            invasion: exoU and exoW probably encode glucosyltransferases
  JOURNAL   Mol Plant Microbe Interact 6 (6), 735-744 (1993)
   PUBMED   8118055
REFERENCE   3  (residues 1 to 459)
  AUTHORS   Popham,D.L. and Stragier,P.
  TITLE     Cloning, characterization, and expression of the spoVB gene of
            Bacillus subtilis
  JOURNAL   J Bacteriol 173 (24), 7942-7949 (1991)
   PUBMED   1744050
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014051.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01943.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..459
                     /product="oligosaccharide flippase family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=47600
     Region          16..418
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 mgrhqsrpve rgylatvwnt aaasisiavl savggllvsr ylgpagrgty tvvtsytmaa
       61 atigdcglta aicyfvarhs tgapdvvhtg ralllvlglv vgaagfvaap lvfphdhaaa
      121 tafraafvaq pifyvsaawi falqatrlpa wnlvravqpl tqtativllv lvsgltvtna
      181 vacflgstvv qamlaawfwr resrsrgrir rktaadlfry agpvflssvp fqlsshldml
      241 llallvapek vglyavavsm sglsrpicaa fgnvamprla rissaetdrg aagihaanss
      301 strrvallav gfslaagvlv vglmclaapl lvpavlgagy apsvhllwll apgaallgcn
      361 wamddvlrgl nlsmtvarce gagavatlig lavlaptvgi agaaiassia ylvafvllvq
      421 avlrvvgvpm rmvphhargl llpwaarari allpnverr
//
LOCUS       WP_235947380             296 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF222 domain-containing protein [Candidatus Frankia alpina].
ACCESSION   WP_235947380
VERSION     WP_235947380.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 296)
  AUTHORS   Davis,E.O., Dullaghan,E.M. and Rand,L.
  TITLE     Definition of the mycobacterial SOS box and use to identify
            LexA-regulated genes in Mycobacterium tuberculosis
  JOURNAL   J Bacteriol 184 (12), 3287-3295 (2002)
   PUBMED   12029045
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014741.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02720.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..296
                     /product="DUF222 domain-containing protein"
                     /calculated_mol_wt=30331
     Region          99..>295
                     /region_name="DUF222"
                     /note="Domain of unknown function (DUF222); pfam02720"
                     /db_xref="CDD:397024"
ORIGIN      
        1 mtthgpspgr apapssasdp apdlapgsgs davpapapdf gtdrtncprl lvalseldel
       61 igqavdmpgr slsdpeldsa vldcsvllar laalrlglvr emhgrgsaqr egatstaall
      121 rtrlrirpge aqrllalavn ddltatgtal tagtisidqa faihtalrvl prevdltrrr
      181 eaealllqca dtfdpadlal lgrhirerlt didtspgggs pdpagnnsdg esesgndhig
      241 ggdgnagdga dgddpasrrh lsitdlsngm trisgeldae gvallrtald slaapt
//
LOCUS       WP_235947479            1177 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Nocardia terrae].
ACCESSION   WP_235947479
VERSION     WP_235947479.1
KEYWORDS    RefSeq.
SOURCE      Nocardia terrae
  ORGANISM  Nocardia terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 1177)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 1177)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1177
                     /organism="Nocardia terrae"
                     /db_xref="taxon:2675851"
     Protein         1..1177
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=123832
     Region          2..1173
                     /region_name="PKS_NbtC"
                     /note="nocobactin polyketide synthase NbtC; NF037941"
                     /db_xref="CDD:468283"
ORIGIN      
        1 mseyrlpdgt vpvllsseta gglraeaaql arylaerpev tpdrvadmlf rtrtarrrra
       61 lamvsgrdel lsaleavaad aehpavisgl gvatarrigf vfpgqgsqrp gmgqlyhels
      121 qayrdeveac aelhrehygh vqplhyllgd egrfentvwe vqpalmfhmt glaamwraag
      181 vrpaaaighs qgelaagwva gvmtrrdavm avterarlve risprgysma vlgmdresve
      241 allarhsgwa elsvvnsphi laisgdrhti vdmvaaaraq gcfakeiqva ypahtsivae
      301 lradfesflg eemsaptfat gdipcygatl gaeitpdleh eqywywnlrn rvrfdraiva
      361 aavdgidtfv evaehptlql avqenlglvp qepalpprdf rvlgtslrta dtlrdftrnl
      421 atvavhdlgy dwqalrttgt vrlplqdfpn tvmnpqrlwa afeppagqsi peptrrrpyr
      481 laetwirldk rslvpprdll vidhtgrnpe laaaictaah nhggsahvls gaaaqdsaas
      541 atgatpvagt aasaligvsv dpsavpdsta gaessgsarr elvsatgsat qpggdaatat
      601 aavvdgsgas aasagaavga rhsastvggd svippdshdt vvillpempa mdapgaleaa
      661 aeffanptwl pdlagvrdcw lvtvggeqvt sgdpvphqfh gavtagfrcl gmeslgvsfr
      721 rvdlaagqad asraaalvra vhvknepela lrdgavyakr leidavqrgp ardadlahvv
      781 ivggtgtlgv efcahyarsg agritllsrs getaevtrrl rpiralgdtp iivescdvtd
      841 adavvelaer qeipatvlvh agvnyvrael aevtpekfre magskiygte hmlhtwprtp
      901 dcrivlcssa aatfggrgqi lyatvnrmld vlarrlraag vdavavqwgl wdlegplhav
      961 gtgpvqaagv tpmraadala vgftdhadhs gaenrlvaaa dwsdvqalmv aigqgplldd
     1021 vvaaaaesav vqpdspgsgh rdgnspriag tpadghrgta dsaaypsgpd rvratvaqgg
     1081 tkamtqfraa agqpgaaggn sanlaervrr qlgrvmgada daldpsvplv algldslqal
     1141 dfrkrvqvel drdlpvaail ggaslddvvr lmagsqa
//
LOCUS       WP_235947489             140 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4260 family protein [Nocardia terrae].
ACCESSION   WP_235947489
VERSION     WP_235947489.1
KEYWORDS    RefSeq.
SOURCE      Nocardia terrae
  ORGANISM  Nocardia terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025445.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14079.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Nocardia terrae"
                     /db_xref="taxon:2675851"
     Protein         1..140
                     /product="DUF4260 family protein"
                     /calculated_mol_wt=14908
     Region          29..137
                     /region_name="DUF4260"
                     /note="Domain of unknown function (DUF4260); pfam14079"
                     /db_xref="CDD:433700"
ORIGIN      
        1 mttiaanlst tdhrlpaavr kaawiawtlf laafavvegv nhgtgswlal vagliapdlt
       61 ffaaigakdp vrqgqlprra vpfynaahrt wiplapaiay afgplqipal ftflvawmlh
      121 igidrsagyg lrtadgfirg
//
LOCUS       WP_235947550             627 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4012 domain-containing protein [Candidatus Frankia alpina].
ACCESSION   WP_235947550
VERSION     WP_235947550.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024594.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13196.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..627
                     /product="DUF4012 domain-containing protein"
                     /calculated_mol_wt=65169
     Region          <27..>103
                     /region_name="DUF6384"
                     /note="Family of unknown function (DUF6384); pfam19911"
                     /db_xref="CDD:437743"
     Region          243..387
                     /region_name="DUF4012"
                     /note="Protein of unknown function (DUF4012); pfam13196"
                     /db_xref="CDD:433030"
ORIGIN      
        1 madaagerav agagggqpag gtgssrrrgr warwlvggla vafavivgla gwvavrglma
       61 rsqldeartr iatlqrqvla gdipaegelr aqvagiaera raarsltgdp vwsafgrlpw
      121 agcplrsaae lvravdtmsd aglpavadlg gdlspdrlrh qmtinvsala aarvpaqraa
      181 aalsalsvaa egtetcgwpg rvsgvddara evidrgrtls galdsvalaa rigpdmlgas
      241 errryllvvq npaesratgg iiggfgllta drghlslegi sgngslpggp tqktpttalp
      301 gpfaarygsf wpdrvwanan ltpdyptvgk lyshlyqagt gidadgtisv dptmlsylla
      361 asrpavlpdg qvvtaanlvd lveskvyari ptvaardrff aqvgqavyaa vesgsadtmk
      421 llsamsraag egrlslssnh adeqdvlsat tlggalsaqs gpflavvtqn ataskldywl
      481 rrrtsyrvqr lpngagavti avqltnvape glpeyvrnre dirgsggnpq aqnnlwlsvy
      541 tgrdslfaga hldgqpvglt sgvedglpvv styltvdrgq trtlelkvle pqagpalavr
      601 pqplpvperl dvegvpvtsl wscrvkn
//
LOCUS       WP_235947722            1372 aa            linear   BCT 02-MAR-2025
DEFINITION  FtsK/SpoIIIE domain-containing protein [Candidatus Frankia alpina].
ACCESSION   WP_235947722
VERSION     WP_235947722.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 1372)
  AUTHORS   Begg,K.J., Dewar,S.J. and Donachie,W.D.
  TITLE     A new Escherichia coli cell division gene, ftsK
  JOURNAL   J Bacteriol 177 (21), 6211-6222 (1995)
   PUBMED   7592387
REFERENCE   2  (residues 1 to 1372)
  AUTHORS   Wu,L.J. and Errington,J.
  TITLE     Bacillus subtilis SpoIIIE protein required for DNA segregation
            during asymmetric cell division
  JOURNAL   Science 264 (5158), 572-575 (1994)
   PUBMED   8160014
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013727.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01580.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1372
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..1372
                     /product="FtsK/SpoIIIE domain-containing protein"
                     /GO_function="GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=143803
     Region          138..1310
                     /region_name="T7_EssCb_Firm"
                     /note="type VII secretion protein EssC, C-terminal domain;
                     TIGR03928"
                     /db_xref="CDD:274860"
ORIGIN      
        1 mrtpsmalrl lrpapvtpla lpsttvpgrl dvnrpprlrp pqrastfalp aapqeprrap
       61 vpvlatflpl laavamaavl htlyvllfav lgplnlilsv vsgrrrdrre freatarhrr
      121 lrdevehaaq aalevecaer haeqpdpasl fatawqrdcg lwarrrgdad ylrlrlgian
      181 qpsavritdt pdhpadpmra dlpavislse ngvvgvaapg arsqelgwwl vaqaavlhsp
      241 eeltirvvta eaeraagwrw irwlphcrpa aqdaavrfaa deadrvacva elrslmqrre
      301 glppdrrpag pdvllvldga rslrsitgli qvlragppvg ihvlclesdv hdlpvecrav
      361 vepdgghltv rqdragmirn vradligpag dgghappgaa rwyesvaral aplrvaaddd
      421 aalpmavrls diigggrpva stilrrwssa patgtpprsr pvpvgvaggg tftldlsrdg
      481 phgliagttg sgksellqti iaahavtyrp delvfvlvdy kggsafaeca alphtvglvt
      541 dldphlvrra ltslsaelhr reallarfga kdldalrraa pgagpgelai pprlvlvvde
      601 fatlarelpd fvtglvslaq rgrslgihll latqrpsgvv speirantnl rialrvtdga
      661 esedvvgcpd aaaiapatpg ravvrtgpdr lttvqtawvg spvrpegdea tgaaaarvtl
      721 lawpepgvpv pgpgrppsva srdsaasdte ltvlvravre aatalrlpal pspwlpplpe
      781 riplsslpaa agsderharp agppgrrrpg pgrtdavltp vaiglsdrcd rqlqqslald
      841 leggghlmvv gaprsgrsta lrtaagaias alsprdvhiy gldygggalt slphtgalvg
      901 rddpervgrm larltvaveq rhrrlaadgv adlrearavt ssdpavrppy lvflldgfeg
      961 llaasedsds gelvdsllrl lregsaaglr vilstdrrgl tgrlaslide rlilrmadpg
     1021 dyalagisaa nmpeqlppgr gvviggrfpt pvevqvalld aeptgraqva alrtmgaqvq
     1081 taaavgpvga edrpfrveal pdcvtparma aaaqvrraap srlppvprlq ailglggdel
     1141 dvvdidlgae pgfvvggppr tgrsstllti alsllaggad vvavtprpsp lralaghprv
     1201 lavvdagldh vagsgdvggs alpfpprgta hptaeavppw vvrpgerppv vlvddaelig
     1261 epaatelasf wqqardagga lvlagsteel vlqyrgfvvd vrraghglll aprrpvdgel
     1321 lglrlpragp gpvpagrgll iqrgvllpvq vtcppaalpg plrlrpttkg ia
//
LOCUS       WP_235947735             364 aa            linear   BCT 02-MAR-2025
DEFINITION  mechanosensitive ion channel family protein [Candidatus Frankia
            alpina].
ACCESSION   WP_235947735
VERSION     WP_235947735.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 364)
  AUTHORS   Lai,J.Y., Poon,Y.S., Kaiser,J.T. and Rees,D.C.
  TITLE     Open and shut: crystal structures of the dodecylmaltoside
            solubilized mechanosensitive channel of small conductance from
            Escherichia coli and Helicobacter pylori at 4.4 A and 4.1 A
            resolutions
  JOURNAL   Protein Sci 22 (4), 502-509 (2013)
   PUBMED   23339071
REFERENCE   2  (residues 1 to 364)
  AUTHORS   Zhang,X., Wang,J., Feng,Y., Ge,J., Li,W., Sun,W., Iscla,I., Yu,J.,
            Blount,P., Li,Y. and Yang,M.
  TITLE     Structure and molecular mechanism of an anion-selective
            mechanosensitive channel of small conductance
  JOURNAL   Proc Natl Acad Sci U S A 109 (44), 18180-18185 (2012)
   PUBMED   23074248
REFERENCE   3  (residues 1 to 364)
  AUTHORS   Pliotas,C., Ward,R., Branigan,E., Rasmussen,A., Hagelueken,G.,
            Huang,H., Black,S.S., Booth,I.R., Schiemann,O. and Naismith,J.H.
  TITLE     Conformational state of the MscS mechanosensitive channel in
            solution revealed by pulsed electron-electron double resonance
            (PELDOR) spectroscopy
  JOURNAL   Proc Natl Acad Sci U S A 109 (40), E2675-E2682 (2012)
   PUBMED   23012406
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017373.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05552.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..364
                     /product="mechanosensitive ion channel family protein"
                     /calculated_mol_wt=37321
     Region          <231..>363
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
ORIGIN      
        1 mtvavawdrg fsdawsriae tgpkigvfla icalggllvr alarllsvla srmgidrvld
       61 rcglpallrr paadlctgav rvlaglglla vlrvavgvfg psaaedtvte lltlllhtll
      121 aiviiaigvs larlartfvr ealrglsyar tagntvtavl viafgkagld evglatsvtt
      181 pvlwailatl tgvivvgvgg glirpmqlrw eeilehaedt aaqarqtwra rhtdhpdgtg
      241 pdrpgpgeed itgvspigaq pvdanpvdeg ragpgnpepg strlptdpdv pveadpaggp
      301 vppsipapts gtvvaaaprp sipppgeqdp fepaapdrts asasppqpng pswptdrsrp
      361 qgpa
//
LOCUS       WP_235947769             418 aa            linear   BCT 02-MAR-2025
DEFINITION  enolase C-terminal domain-like protein [Paenibacillus glycinis].
ACCESSION   WP_235947769
VERSION     WP_235947769.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycinis
  ORGANISM  Paenibacillus glycinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 418)
  AUTHORS   Thoden,J.B., Taylor Ringia,E.A., Garrett,J.B., Gerlt,J.A.,
            Holden,H.M. and Rayment,I.
  TITLE     Evolution of enzymatic activity in the enolase superfamily:
            structural studies of the promiscuous o-succinylbenzoate synthase
            from Amycolatopsis
  JOURNAL   Biochemistry 43 (19), 5716-5727 (2004)
   PUBMED   15134446
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024771.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13378.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Paenibacillus glycinis"
                     /db_xref="taxon:2697035"
     Protein         1..418
                     /product="enolase C-terminal domain-like protein"
                     /calculated_mol_wt=46177
     Region          14..418
                     /region_name="enolase_like"
                     /note="Enolase-superfamily, characterized by the presence
                     of an enolate anion intermediate which is generated by
                     abstraction of the alpha-proton of the carboxylate
                     substrate by an active site residue and is stabilized by
                     coordination to the essential Mg2+ ion; cl40480"
                     /db_xref="CDD:477366"
     Site            order(219,245,271)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:238188"
     Site            order(294,348)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:238188"
ORIGIN      
        1 mnenkegacr gmakitgirc irtrkngtwt vvkvmtdqdg lygigsandl ynpeavaqvv
       61 eqllapqlig retgniediw qtmqlssywr ngsilqtaig gidvalwdik gkeaglpiyq
      121 llggacraav pcyghagghd iaelkedvhr freqgytvir aqlggygggg fipsgeanvp
      181 eeawakdavf dehaylqaip amfeqlrvef gsavqfthdv hehvspigav rlskrlepyd
      241 lffledalpp ehvgwyrqlr qqsatpqavg elfanpqewt pliterlidf irvrvskvgg
      301 isaarkiatl aeafgvrtaw qeggendpvn qaaavhldma vwnfgiqein hfkpeereaf
      361 pglverrggy lyvsgkpglg idfdeekall lpgddwkras yhqpykldrk adgtlvrp
//
LOCUS       WP_235947117             104 aa            linear   BCT 02-MAR-2025
DEFINITION  thiolase C-terminal domain-containing protein [Candidatus Frankia
            alpina].
ACCESSION   WP_235947117
VERSION     WP_235947117.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 104)
  AUTHORS   Brown,A.K., Sridharan,S., Kremer,L., Lindenberg,S., Dover,L.G.,
            Sacchettini,J.C. and Besra,G.S.
  TITLE     Probing the mechanism of the Mycobacterium tuberculosis
            beta-ketoacyl-acyl carrier protein synthase III mtFabH: factors
            influencing catalysis and substrate specificity
  JOURNAL   J Biol Chem 280 (37), 32539-32547 (2005)
   PUBMED   16040614
REFERENCE   2  (residues 1 to 104)
  AUTHORS   Kursula,P., Ojala,J., Lambeir,A.M. and Wierenga,R.K.
  TITLE     The catalytic cycle of biosynthetic thiolase: a conformational
            journey of an acetyl group through four binding modes and two
            oxyanion holes
  JOURNAL   Biochemistry 41 (52), 15543-15556 (2002)
   PUBMED   12501183
REFERENCE   3  (residues 1 to 104)
  AUTHORS   Scarsdale,J.N., Kazanina,G., He,X., Reynolds,K.A. and Wright,H.T.
  TITLE     Crystal structure of the Mycobacterium tuberculosis
            beta-ketoacyl-acyl carrier protein synthase III
  JOURNAL   J Biol Chem 276 (23), 20516-20522 (2001)
   PUBMED   11278743
REFERENCE   4  (residues 1 to 104)
  AUTHORS   Modis,Y. and Wierenga,R.K.
  TITLE     Crystallographic analysis of the reaction pathway of Zoogloea
            ramigera biosynthetic thiolase
  JOURNAL   J Mol Biol 297 (5), 1171-1182 (2000)
   PUBMED   10764581
REFERENCE   5  (residues 1 to 104)
  AUTHORS   Mathieu,M., Modis,Y., Zeelen,J.P., Engel,C.K., Abagyan,R.A.,
            Ahlberg,A., Rasmussen,B., Lamzin,V.S., Kunau,W.H. and Wierenga,R.K.
  TITLE     The 1.8 A crystal structure of the dimeric peroxisomal
            3-ketoacyl-CoA thiolase of Saccharomyces cerevisiae: implications
            for substrate binding and reaction mechanism
  JOURNAL   J Mol Biol 273 (3), 714-728 (1997)
   PUBMED   9402066
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047238.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22691.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..104
                     /product="thiolase C-terminal domain-containing protein"
                     /calculated_mol_wt=10798
ORIGIN      
        1 maliydhftp mvlmqledyg fckkgeggpf vesganrykg gsipanthgg qlseayiigm
       61 thivegveqi rgtavnqvpd aklalvtggp aalpvsglil grmp
//
LOCUS       WP_235947772             532 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3502 domain-containing protein [Paenibacillus glycinis].
ACCESSION   WP_235947772
VERSION     WP_235947772.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycinis
  ORGANISM  Paenibacillus glycinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 532)
  AUTHORS   Culurgioni,S., Tang,M. and Walsh,M.A.
  TITLE     Structural characterization of the Streptococcus pneumoniae
            carbohydrate substrate-binding protein SP0092
  JOURNAL   Acta Crystallogr F Struct Biol Commun 73 (Pt 1), 54-61 (2017)
   PUBMED   28045395
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023435.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12010.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Paenibacillus glycinis"
                     /db_xref="taxon:2697035"
     Protein         1..532
                     /product="DUF3502 domain-containing protein"
                     /calculated_mol_wt=59371
     Region          70..525
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mrkrksripm llavmmlvtv mlaacggnna nngnggsagn aggnaggdng atapadstdg
       61 nagkqedevt lkfyfggdkk aatdevwtai sdyvkskgln vkfninfipf tdfkdkmlvm
      121 aasgdswdmn fdgdwlsykq maakgsymal ndllpefapn lykkyqeqgt lsaatvngqi
      181 vglpwtmkmn qrlfagwrsd laekagitia pdsiktiedv dgllrqlkka ypneklsrst
      241 plaiymirde wvdlnfhglg fylndpkvtv qpveqqpfyq eaikmakvwy ddklinrdam
      301 idkedgaaew rngktlltlt shewanadpg fsdpsfkqqm sllypdkkqv nrtalanvva
      361 inrnskhadr vlrfmdmiet dqklydlvqy giegktykld getaiypdgm ntttsnymew
      421 ggqwafwkpq fmrptstypk dfwvheaefa aepenvnspi dglfiaedam knelakrdqt
      481 adetgkplef givkdpdkev asyiekqkgn gldkiltetq kqidayltsq ak
//
LOCUS       WP_235947908             348 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 19 protein [Paenibacillus glycinis].
ACCESSION   WP_235947908
VERSION     WP_235947908.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycinis
  ORGANISM  Paenibacillus glycinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012409.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00182.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Paenibacillus glycinis"
                     /db_xref="taxon:2697035"
     Protein         1..348
                     /product="glycoside hydrolase family 19 protein"
                     /GO_function="GO:0004568 - chitinase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006032 - chitin catabolic process
                     [Evidence IEA]"
                     /GO_process="GO:0016998 - cell wall macromolecule
                     catabolic process [Evidence IEA]"
                     /calculated_mol_wt=37616
     Region          8..127
                     /region_name="beta-trefoil_FSCN-like"
                     /note="fascin-like domain, beta-trefoil fold, found in the
                     fascin-like family; cd00257"
                     /db_xref="CDD:467441"
     Region          148..348
                     /region_name="chitinase_GH19"
                     /note="Glycoside hydrolase family 19, chitinase domain;
                     cd00325"
                     /db_xref="CDD:381595"
     Site            order(201..202,208,210..212,241..245,247..248,281,
                     310..311,315,323,327)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:381595"
ORIGIN      
        1 mlsviksafn nnyvsaedqg asplianrta akgwetfnvi nnpdgtisfl ssannkyvta
       61 dlnentklia rattiqawek fkrvdrgngk valqavannq yvcadmnleg vlyanrptas
      121 gweefviaaq pnqnpeapaq qpsggfvvte qqfnqifpgr nhfytyaglv aatsaypafa
      181 ktggstierq eaaaflanih hetgglyhiv eankanynhy fdynskykvv pgkqyygrgp
      241 lqiswnynyg aagealglpl lsnpdlvaqd pavamktalw fwntqtgagk mtchnamiqs
      301 kgfgetirti ngalecnrgg ggavpnrveq ykkicailgv apgdhlsc
//
LOCUS       WP_235947915             264 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Candidatus Frankia alpina].
ACCESSION   WP_235947915
VERSION     WP_235947915.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 264)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..264
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=27484
     Region          32..246
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mmlaadgspt dsqagsgdpg daesgshpps atdapvrvli addealvrag frvlvesasd
       61 laviakagtg aqavrlarql rpdvvlmdir mpimdgleam riivadpgta atrvlvvttf
      121 dqdehvfaal hggasgfvlk gtrpedllaa irivaagdal ltpsitrrli aefaqrpqpp
      181 tardeeltrl tererevllq vaaglsnsei arqlfvgvtt vkthvsrllt klgardraql
      241 vvaayefgav lpgtgslppg ssss
//
LOCUS       WP_235947944             656 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Candidatus Frankia alpina].
ACCESSION   WP_235947944
VERSION     WP_235947944.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 656)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..656
                     /product="AMP-binding protein"
                     /calculated_mol_wt=70155
ORIGIN      
        1 mtyiwrpnqe ysenanvvrl mrhfgvadad alravsvadv gafwdavvtd lgirfrrpyr
       61 rvldtasgpq fpewfvggel nvtdacldrw aeqspaapav vheteaglvr qlsyaeladq
      121 varvrgglrr nligpgdava lylpmipeav valyavaslg aiavplfsgf apgaiaarlr
      181 daevkavita dgtvrrgrtv rmrpqldeai aafpgvrlvv tvenlagaav gptdnppade
      241 agepavvrws sllagppdpd iaptaasdvl llgytsgttg rpkgavhtha gfltkvasel
      301 pygfelgpgr slcwitdmgw imgplavlgt hacggslvly egspdtpdst rvwqlvarhr
      361 vttlgvsptl vrtlrvaadg lptqdlssvr vlgstgepwd pesyewlard vftgrvpvvn
      421 fsggtevggs llcpypvedi ascslggpal gmdvdvvged grqvrgvtge lvcrqpwpam
      481 trgvwrdder yletywstfp glwrqgdfal vdehrgwyvl grsddvmnvs gkrvapteie
      541 svlaadpava esavvgipdp tkneavwafw varpgegieg iegvarrlrd rvaaevgkpf
      601 vptqvvrvea lprtrsakil rravraavld idpgdlsgae npeavetira qvkglr
//
LOCUS       WP_235947974             297 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphatase PAP2 family protein [Candidatus Frankia alpina].
ACCESSION   WP_235947974
VERSION     WP_235947974.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025736.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14378.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..297
                     /product="phosphatase PAP2 family protein"
                     /calculated_mol_wt=32107
     Region          38..217
                     /region_name="PAP2_Aur1_like"
                     /note="PAP2_like proteins, Aur1_like subfamily. Yeast
                     Aur1p or Ipc1p is necessary for the addition of inositol
                     phosphate to ceramide, an essential step in yeast
                     sphingolipid synthesis, and is the target of several
                     antifungal compounds such as aureobasidin; cd03386"
                     /db_xref="CDD:239481"
     Site            order(112,120,160..162,196,202,206)
                     /site_type="active"
                     /db_xref="CDD:239481"
     Region          <243..>286
                     /region_name="PRK05641"
                     /note="putative acetyl-CoA carboxylase biotin carboxyl
                     carrier protein subunit; Validated"
                     /db_xref="CDD:235540"
ORIGIN      
        1 mayavsqfll iavlygtysf srhlasgrep aalaagkdvw rlerllhlps eaavqrlalh
       61 shlliraadw fyilvhflsv imlllwvfir hrrhwtrvrn flimatgmal iihllyplap
      121 prflssvphg slvdtgavyg pspygegsgg ianeyaamps lhvgwsllea wavitilhhr
      181 arwlmvlhpv ltivvvvita nhywldglvg aslvvvsiva ldqanrawar rglnrhetsl
      241 ripaptpsve apssavpsaa vpssavpsav lpplatspes gaqsrvagrd ravaggt
//
LOCUS       WP_235947593             257 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2470 domain-containing protein [Candidatus Frankia alpina].
ACCESSION   WP_235947593
VERSION     WP_235947593.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 257)
  AUTHORS   Zhao,A., Fang,Y., Chen,X., Zhao,S., Dong,W., Lin,Y., Gong,W. and
            Liu,L.
  TITLE     Crystal structure of Arabidopsis glutamyl-tRNA reductase in complex
            with its stimulator protein
  JOURNAL   Proc Natl Acad Sci U S A 111 (18), 6630-6635 (2014)
   PUBMED   24753615
REFERENCE   2  (residues 1 to 257)
  AUTHORS   Czarnecki,O., Hedtke,B., Melzer,M., Rothbart,M., Richter,A.,
            Schroter,Y., Pfannschmidt,T. and Grimm,B.
  TITLE     An Arabidopsis GluTR binding protein mediates spatial separation of
            5-aminolevulinic acid synthesis in chloroplasts
  JOURNAL   Plant Cell 23 (12), 4476-4491 (2011)
   PUBMED   22180625
REFERENCE   3  (residues 1 to 257)
  AUTHORS   Jung,H.S., Okegawa,Y., Shih,P.M., Kellogg,E., Abdel-Ghany,S.E.,
            Pilon,M., Sjolander,K., Shikanai,T. and Niyogi,K.K.
  TITLE     Arabidopsis thaliana PGR7 encodes a conserved chloroplast protein
            that is necessary for efficient photosynthetic electron transport
  JOURNAL   PLoS One 5 (7), e11688 (2010)
   PUBMED   20657737
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022083.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10615.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..257
                     /product="DUF2470 domain-containing protein"
                     /calculated_mol_wt=27474
     Region          173..248
                     /region_name="DUF2470"
                     /note="Domain of unknown function (DUF2470); pfam10615"
                     /db_xref="CDD:431396"
ORIGIN      
        1 maspthtqnm vtmaqqartv laggrtallt lpceqargwv gviddggepv lmastegpla
       61 caarngrrsw vevpghager lilagplwmv pgtteqilrr ladlgravst eggiadglsv
      121 lalavddvvl clpttdmdcg prrwtsatvg rridlatyaf aepdlisaya peliehlnvg
      181 hadqmrqlar harpaategd vagvqvsgld rygldlwrvd gagaeqvrvt frqplieprs
      241 lgrelrrlld qstntse
//
LOCUS       WP_235948090             371 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Paenibacillus glycinis].
ACCESSION   WP_235948090
VERSION     WP_235948090.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycinis
  ORGANISM  Paenibacillus glycinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Paenibacillus glycinis"
                     /db_xref="taxon:2697035"
     Protein         1..371
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=41360
     Region          2..346
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(4,59..60,62..64,67,87,90..91,94,172,175..176,
                     179..181,184,226,230,279..280,284,288,304,307..308,
                     311..312,315)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340887"
ORIGIN      
        1 mlasfvggyw adrigrkpvl aigeclntfa flgmllansl wwssawvtfa mllligiatg
       61 linpaadaml idvstketrt ymysinywtr nfslmlglmv ggwffqnhlf gllfvlfsms
      121 litltitllf iretydrhhp vtvpasnglh avlssyrtvv rdipfvwftl ggiaiyalef
      181 qrvnfisirm eheiaartvr lfdfppftld gvkllslltv entllivlfv sfaaklirnr
      241 seqpvmyvrf tlfglgysyl afsnqiaglf lavivltige llyvptrqtm lasmvdeskr
      301 gsymafnglv vqagkmfgal gifvgglvgd igmgllyllf aimaiglsrl gyvkwnrqtk
      361 amkmptsiik s
//
LOCUS       WP_235948094             530 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Paenibacillus glycinis].
ACCESSION   WP_235948094
VERSION     WP_235948094.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycinis
  ORGANISM  Paenibacillus glycinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 530)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 530)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 530)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 530)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Paenibacillus glycinis"
                     /db_xref="taxon:2697035"
     Protein         1..530
                     /product="ATP-binding protein"
                     /calculated_mol_wt=59922
     Region          9..>242
                     /region_name="AcoR"
                     /note="Transcriptional regulator DhaR of acetoin/glycerol
                     metabolism [Transcription]; COG3284"
                     /db_xref="CDD:442514"
     Region          190..528
                     /region_name="NtrB"
                     /note="Signal transduction histidine kinase NtrB, nitrogen
                     specific [Signal transduction mechanisms]; COG3852"
                     /db_xref="CDD:443061"
ORIGIN      
        1 mmesretyiy nshqkcfdnk lnpndlpvpk eklptsvleq kkrmlevtis varkfmtrlv
       61 sdldgtavli citdhegyil emygdemiky qveslglstg irleeekvgt nsiemalkme
      121 qsakvigsdh ffrclhesac fsvpfhasgk isgtitmmma arhvspyhlg llqsavdsie
      181 revitkkqnk kllvlnqvlm dnsrngvilt nedgkivein pyaekvlsst kdelcnrqit
      241 evaiigeymv svlsgsekye dieisisnkt flfdsfpiyd esnqiigafg qfrditerlv
      301 lerqlmlsek lsaigkigag laheirnplt siigllallk enfktadpkq kdyfriifse
      361 lerikhlvqq fvmmakpdqk ailktsvslh aliedtlalm qsdfhsknik lqyqpfykdq
      421 ihldkdkikq vilnvlqnsl daidfdgnis vavqqsqfdn gieivirddg ygmdkdtldk
      481 lstpfhstkk yglglglsms ysivewhkgr ievesekgkg ttfiiwlprt
//
LOCUS       WP_235948158             360 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase domain-containing protein [Nocardia terrae].
ACCESSION   WP_235948158
VERSION     WP_235948158.1
KEYWORDS    RefSeq.
SOURCE      Nocardia terrae
  ORGANISM  Nocardia terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024880.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13489.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Nocardia terrae"
                     /db_xref="taxon:2675851"
     Protein         1..360
                     /product="methyltransferase domain-containing protein"
                     /calculated_mol_wt=38091
     Region          4..65
                     /region_name="Methyltransf_13"
                     /note="Putative zinc binding domain; pfam08421"
                     /db_xref="CDD:429987"
     Region          206..357
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mygcrgcglg plvrvldlgk mpaadhfpsm tsvdtgseat hplamdlcam cglaqlaedd
       61 tvtaeprgve pqalrdqavd avsrvaaggw lpgggtvref gsphggswlp llterdyvlt
      121 ggpadvvidc fgimhephqr vafaqraaat apggvlllqf hslhtivrqg qwnalrhghf
      181 ayysmaalqk llrsagmvav tawefslygg svlvaavhap aeadpwiarv caqeaavadp
      241 avvrglqqea drqagalrrw vesesasgrv vyaygaasra valfhlaglh rgllagvada
      301 spgkqgrrmp gtdipimspa ellaaqpdrv lltlpdllpe vserwpeleg rwvidvpetl
//
LOCUS       WP_235948277             862 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5054 domain-containing protein [Paenibacillus glycinis].
ACCESSION   WP_235948277
VERSION     WP_235948277.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycinis
  ORGANISM  Paenibacillus glycinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16477.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Paenibacillus glycinis"
                     /db_xref="taxon:2697035"
     Protein         1..862
                     /product="DUF5054 domain-containing protein"
                     /calculated_mol_wt=95969
     Region          1..861
                     /region_name="MngB"
                     /note="Alpha-mannosidase [Carbohydrate transport and
                     metabolism]; COG0383"
                     /db_xref="CDD:440152"
     Region          5..268
                     /region_name="GH38N_AMII_like_1"
                     /note="N-terminal catalytic domain of mainly
                     uncharacterized eukaryotic proteins similar to
                     alpha-mannosidases; glycoside hydrolase family 38 (GH38);
                     cd10791"
                     /db_xref="CDD:212103"
     Site            order(13,15,18,130,132,154,241)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:212103"
ORIGIN      
        1 mkpekiyvvf kthvdlgftd lpsgvvrqyk ermmedvlnv ceataanppg hryvwtlpaw
       61 mlqqcldepd aerrarleql vqagqliwha lpftthtefc gveeymrgly mseelnrkyg
      121 reviaakmtd vpghawmlps llaqagvrfl hlgvnacsap velprlfwwe gpdgsrvltw
      181 ysageygtsl lppddweypi wfallqthdn fgpqssvvvq ellddvaaky pdaevhigtm
      241 ddfardfiar gyddipviak dladswihgv gtyppevaqv rglrydlasa esllatqpkp
      301 ddaeamrhia kgyeqtllfg ehtwgidvks nllpgrpdgr afwtrdiakd raafpdsyrk
      361 aeqsweeqrd yvrtarrela aavpapgada adgmavtvhn plprarqfav vdlgealagg
      421 rlvdpatekr ypvdaagrav ideiapletr allwqagasg eaklsacdta frervgaaea
      481 liengslrir adgasgrivs fydkragkew aaeggfgeyq yevfgktdil rfvkryaydl
      541 rdwyvndfgk pgypriggrl fengdartel ireggrqqir ilygtdpesr gefgnaatae
      601 lvvtldgeas hadfewklag kretafaeag yfvlplnvgg pqyrlqklga vvdpvrdiar
      661 gantrlhcvd qwvdvtgedg sglavfpldt plcsigepgi fqydeayvpe epvlffnlfn
      721 nqwgtnfpqw iggdlayrfr lqphagdwka agleaaaeel rrpliaarge aaanrpllre
      781 plrdvrwlav ktaesgedav virwmnatde rrettlalng dyaavircsg vereiaplev
      841 rdgrvtlamr pyeivtlklc rs
//
LOCUS       WP_235948280              96 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein, partial [Candidatus Frankia
            alpina].
ACCESSION   WP_235948280
VERSION     WP_235948280.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 96)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 96)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02771.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..>96
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
     Region          9..>93
                     /region_name="CaiA"
                     /note="Acyl-CoA dehydrogenase related to the alkylation
                     response protein AidB [Lipid transport and metabolism];
                     COG1960"
                     /db_xref="CDD:441563"
ORIGIN      
        1 mnfgmgkhdv eitpaeraev leaartlake favagpsada enrfptelvp lykdsglpsi
       61 aipkkygglg adiattaevs relakgdpai alshsr
//
LOCUS       WP_235948291             160 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Nocardia terrae].
ACCESSION   WP_235948291
VERSION     WP_235948291.1
KEYWORDS    RefSeq.
SOURCE      Nocardia terrae
  ORGANISM  Nocardia terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 160)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 160)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 160)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 160)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Nocardia terrae"
                     /db_xref="taxon:2675851"
     Protein         <1..160
                     /product="ATP-binding protein"
     Region          <5..65
                     /region_name="WalK"
                     /note="Sensor histidine kinase WalK [Signal transduction
                     mechanisms]; COG5002"
                     /db_xref="CDD:444026"
ORIGIN      
        1 lrpgeeklvf nrfwrsdpsr mrrsggtglg lsisvedanl hegkleawge igvgasfrlt
       61 lplvrgkklg isplsleppk irgtvspeql aldiassdat peaiasaaav lesvpvatep
      121 epaatesedg tpavespnge agfeaiapef psasaadgqs
//
LOCUS       WP_235948325             333 aa            linear   BCT 02-MAR-2025
DEFINITION  polysaccharide deacetylase family protein [Nocardia terrae].
ACCESSION   WP_235948325
VERSION     WP_235948325.1
KEYWORDS    RefSeq.
SOURCE      Nocardia terrae
  ORGANISM  Nocardia terrae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 333)
  AUTHORS   Freiberg,C., Fellay,R., Bairoch,A., Broughton,W.J., Rosenthal,A.
            and Perret,X.
  TITLE     Molecular basis of symbiosis between Rhizobium and legumes
  JOURNAL   Nature 387 (6631), 394-401 (1997)
   PUBMED   9163424
REFERENCE   2  (residues 1 to 333)
  AUTHORS   Mishra,C., Semino,C.E., McCreath,K.J., de la Vega,H., Jones,B.J.,
            Specht,C.A. and Robbins,P.W.
  TITLE     Cloning and expression of two chitin deacetylase genes of
            Saccharomyces cerevisiae
  JOURNAL   Yeast 13 (4), 327-336 (1997)
   PUBMED   9133736
REFERENCE   3  (residues 1 to 333)
  AUTHORS   Millward-Sadler,S.J., Poole,D.M., Henrissat,B., Hazlewood,G.P.,
            Clarke,J.H. and Gilbert,H.J.
  TITLE     Evidence for a general role for high-affinity non-catalytic
            cellulose binding domains in microbial plant cell wall hydrolases
  JOURNAL   Mol Microbiol 11 (2), 375-382 (1994)
   PUBMED   8170399
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013672.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01522.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Nocardia terrae"
                     /db_xref="taxon:2675851"
     Protein         1..333
                     /product="polysaccharide deacetylase family protein"
                     /GO_function="GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=35483
     Region          108..315
                     /region_name="CE4_SF"
                     /note="Catalytic NodB homology domain of the carbohydrate
                     esterase 4 superfamily; cl15692"
                     /db_xref="CDD:472828"
ORIGIN      
        1 mrasamlrma tavllcatat acggttatap ppaattpapt srppdpaava anelgripil
       61 myhrieadpa seydqtptkf taeldrlytd gyrpitiaqy lagaidlpag thpvvltfdd
      121 strpqltltd sgepapdcav glleqfhsrh pdfaatatfy vnnapfgddp ralpwlvhhg
      181 ydigahtath pnlsrldatd vqrelvqnvr aittavpgta irsmalplgv ypvdhalats
      241 gtwdgtsytf gavllvganp apspfattmd ptalprirsg rspipfdsty wldrlnadpt
      301 srytsdgdpa hisyphtqte qlaprwspta qsy
//
LOCUS       WP_235948489             343 aa            linear   BCT 02-MAR-2025
DEFINITION  KR domain-containing protein [Candidatus Frankia alpina].
ACCESSION   WP_235948489
VERSION     WP_235948489.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 343)
  AUTHORS   Bonnett,S.A., Whicher,J.R., Papireddy,K., Florova,G., Smith,J.L.
            and Reynolds,K.A.
  TITLE     Structural and stereochemical analysis of a modular polyketide
            synthase ketoreductase domain required for the generation of a
            cis-alkene
  JOURNAL   Chem Biol 20 (6), 772-783 (2013)
   PUBMED   23790488
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020243.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08659.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..343
                     /product="KR domain-containing protein"
                     /calculated_mol_wt=36267
     Region          <1..311
                     /region_name="Pks2_ls1_myc"
                     /note="sulfolipid-1 biosynthesis
                     phthioceranic/hydroxyphthioceranic acid synthase;
                     NF041183"
                     /db_xref="CDD:469091"
ORIGIN      
        1 mglataawlt shragrvvln grsapspevd erltelaaqg tdirvvlgda aepgvaerlv
       61 aaatadvtlr gvvhsamvlq daalttitrd qlhgvwhpkv fgaarlhett eglpldwfvl
      121 yssissllgi lgqgsyasan swldgfadwr saqglptisi nwgiwgeiga gmifkergyq
      181 tiptgeglha letilahgrr hagllpggpt awippsgrsl pvfqaviqdg gtqaaaeddg
      241 padirarlra aaagvprrtl leeylgehlr vvlrlnqrtl dpdtplrsfg fdsllalelr
      301 srlepalgit lpgnfiwkyp tiaalaggla dfaglaldgd dgp
//
LOCUS       WP_235948588             251 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Candidatus Frankia
            alpina].
ACCESSION   WP_235948588
VERSION     WP_235948588.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13458.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..251
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=24612
     Region          43..>226
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mrsrsamaal avgvtlalaa cgssdttgks apapapagpk gspvkllsiv plttpttnfp
       61 eqagavkaav ralnkrggin ghlvqvdvcd skndqaagea carkavngky lavvsafsta
      121 gginailekg gipsigssgi agdgsdltsk isfvyqpast yyeavcpqll kdaakvskmg
      181 vvnydiaaas rlgalaglgg kaagvgvqei kvspttsdya piaarltdgg aqggalglae
      241 assigphpgr r
//
LOCUS       WP_235948687             280 aa            linear   BCT 02-MAR-2025
DEFINITION  pentapeptide repeat-containing protein [Candidatus Frankia alpina].
ACCESSION   WP_235948687
VERSION     WP_235948687.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 280)
  AUTHORS   Bateman,A., Murzin,A.G. and Teichmann,S.A.
  TITLE     Structure and distribution of pentapeptide repeats in bacteria
  JOURNAL   Protein Sci 7 (6), 1477-1480 (1998)
   PUBMED   9655353
REFERENCE   2  (residues 1 to 280)
  AUTHORS   Kieselbach,T., Mant,A., Robinson,C. and Schroder,W.P.
  TITLE     Characterisation of an Arabidopsis cDNA encoding a thylakoid lumen
            protein related to a novel 'pentapeptide repeat' family of proteins
  JOURNAL   FEBS Lett 428 (3), 241-244 (1998)
   PUBMED   9654141
REFERENCE   3  (residues 1 to 280)
  AUTHORS   Black,K., Buikema,W.J. and Haselkorn,R.
  TITLE     The hglK gene is required for localization of heterocyst-specific
            glycolipids in the cyanobacterium Anabaena sp. strain PCC 7120
  JOURNAL   J Bacteriol 177 (22), 6440-6448 (1995)
   PUBMED   7592418
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013003.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00805.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..280
                     /product="pentapeptide repeat-containing protein"
                     /calculated_mol_wt=29688
     Region          <67..>117
                     /region_name="YjbI"
                     /note="Uncharacterized conserved protein YjbI, contains
                     pentapeptide repeats [Function unknown]; COG1357"
                     /db_xref="CDD:440968"
     Region          151..189
                     /region_name="WD40"
                     /note="WD40 repeats; smart00320"
                     /db_xref="CDD:197651"
ORIGIN      
        1 mpspetldfl gqwlagrees erthcttalt apaadapagr adaaavlafa ycldaihrgr
       61 pshaparsvl agadltganl sgaelhvssl ngtdlrrael tgavlrgcdl tgarwtgsha
      121 sttqallcrp agdarrkgwl vaptatrrra gvrlssftgh tgwltagaws pdntriltts
      181 sdgtariwda ntgrpagwrl eqlpagelav fsagedelfg atpeawrwlg wlapragrld
      241 rlpaetwgpi pplspsttpt lrrdegsatr mdswrkhgfs
//
LOCUS       WP_235948861             444 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Candidatus Frankia alpina].
ACCESSION   WP_235948861
VERSION     WP_235948861.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..444
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45013
     Region          1..394
                     /region_name="efflux_EmrB"
                     /note="drug resistance transporter, EmrB/QacA subfamily;
                     TIGR00711"
                     /db_xref="CDD:129794"
ORIGIN      
        1 mfattftatv lsvsirtvag dlhssvdvis wavtgsllaq avampilgrv gdirghrrtf
       61 lvgsvlavvf slatalawdp vsliafraaa qvagaatipa sfamlfhafp phervrpsaw
      121 asgvlsgasv sglaigglvi dsigwrplfv mqagialipl vaavkvlpvd vgnrslkldk
      181 agalvlgaat faltfgvnra agwglrpivv gllvavplll wllvvverrt ampvlptall
      241 gerdiraaga ssfllgaahm gnflvtplll egvfglsvaa tslvtmtrtl sialaapsas
      301 rlgawissrv lagvaggvyt valavlalgt qydrlpvvva glivsglafg haqppllvit
      361 gnaapadsfg latslqqtan qigaviwmsl lsaivgdalh aapftaayla aaglsaaagl
      421 ailfahrgpt lplqrdkadt qasg
//
LOCUS       WP_235948891             189 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Candidatus Frankia alpina].
ACCESSION   WP_235948891
VERSION     WP_235948891.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 189)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 189)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13669.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..189
                     /product="VOC family protein"
                     /calculated_mol_wt=19860
     Region          50..182
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mttepvfhlq armqaemipt rcgatdlaad gapfsgieai esllagltfh hfaivvadld
       61 larelytvsl gieswhtral sgpavrrgrp valdgarvaa grlgssqvel vepgrqpwta
      121 reildrrgeg vfaigylvdd vaaqlhasva agarveqvrp ntqhpvgayl dggtgllvdl
      181 vqsgsswsg
//
LOCUS       WP_235948900             133 aa            linear   BCT 02-MAR-2025
DEFINITION  protein kinase domain-containing protein [Candidatus Frankia
            alpina].
ACCESSION   WP_235948900
VERSION     WP_235948900.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 133)
  AUTHORS   Hunter,T. and Plowman,G.D.
  TITLE     The protein kinases of budding yeast: six score and more
  JOURNAL   Trends Biochem Sci 22 (1), 18-22 (1997)
   PUBMED   9020587
REFERENCE   2  (residues 1 to 133)
  AUTHORS   Hanks,S.K. and Hunter,T.
  TITLE     Protein kinases 6. The eukaryotic protein kinase superfamily:
            kinase (catalytic) domain structure and classification
  JOURNAL   FASEB J 9 (8), 576-596 (1995)
   PUBMED   7768349
REFERENCE   3  (residues 1 to 133)
  AUTHORS   Hanks,S.K. and Quinn,A.M.
  TITLE     Protein kinase catalytic domain sequence database: identification
            of conserved features of primary structure and classification of
            family members
  JOURNAL   Methods Enzymol 200, 38-62 (1991)
   PUBMED   1956325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00069.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..133
                     /product="protein kinase domain-containing protein"
                     /GO_function="GO:0004672 - protein kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006468 - protein phosphorylation
                     [Evidence IEA]"
                     /calculated_mol_wt=14435
     Region          2..>133
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 mflarnnlar pvliklitap fgrdtefrrr lridldrlrr lapfclaail dldtlarppy
       61 vvveyidast laasveddgp lrsadtarla aalsvlhgeg ivfgdlkptn vvlsgqglrl
      121 vdfglarvps lsr
//
LOCUS       WP_235948908             202 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5947 family protein [Candidatus Frankia alpina].
ACCESSION   WP_235948908
VERSION     WP_235948908.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040271.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19372.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..202
                     /product="DUF5947 family protein"
                     /calculated_mol_wt=22206
ORIGIN      
        1 mragairagq dgercdlcaa gvpndhrhll desrdsvlcl cracallfdr daaarghyrl
       61 ipqrrlrvvd ldrdgsdpra lgipvglafi vpgddgevra rypspmgath wdlepvawrr
      121 lvarapvlag ltprvealla ntarnrrefw ivpiddcyrl vavvrrewtg lsggirvwpa
      181 vddffaalpd rsrrgsplgr gg
//
LOCUS       WP_235948683             171 aa            linear   BCT 02-MAR-2025
DEFINITION  2OG-Fe(II) oxygenase [Candidatus Frankia alpina].
ACCESSION   WP_235948683
VERSION     WP_235948683.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 171)
  AUTHORS   Mello,L.V. and Rigden,D.J.
  TITLE     A new family of bacterial DNA repair proteins annotated by the
            integration of non-homology, distant homology and structural
            bioinformatic methods
  JOURNAL   FEBS Lett 586 (21), 3908-3913 (2012)
   PUBMED   23022560
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09859.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..171
                     /product="2OG-Fe(II) oxygenase"
                     /calculated_mol_wt=18256
ORIGIN      
        1 mtasaelaga agadvgecvr amdwsalaae ldavgcaptg plltaaqcqe iaelygddrr
       61 frslryragd wnalhrdlyg elvfplqvvi gldapgvdyt ggelllveqr mraqsrggah
      121 tlprghalif ttrdrptpsv rgwsaspmrh gvstvrtger hslglifrda a
//
LOCUS       WP_235948996             106 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2397 family protein [Candidatus Frankia alpina].
ACCESSION   WP_235948996
VERSION     WP_235948996.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021197.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09660.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..106
                     /product="DUF2397 family protein"
                     /calculated_mol_wt=11788
     Region          10..>103
                     /region_name="TIGR02677"
                     /note="TIGR02677 family protein"
                     /db_xref="CDD:131724"
ORIGIN      
        1 mttmhrvppe mfrfateqna dlytavlrvf geanerlett lgpdgieerl gfvglfralg
       61 pdelgralsq lgkwqlldvi qnhgadysta aeyergnlqy slslsr
//
LOCUS       WP_235948998             158 aa            linear   BCT 02-MAR-2025
DEFINITION  DsbA family protein [Candidatus Frankia alpina].
ACCESSION   WP_235948998
VERSION     WP_235948998.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 158)
  AUTHORS   Laurie,A.D. and Lloyd-Jones,G.
  TITLE     The phn genes of Burkholderia sp. strain RP007 constitute a
            divergent gene cluster for polycyclic aromatic hydrocarbon
            catabolism
  JOURNAL   J Bacteriol 181 (2), 531-540 (1999)
   PUBMED   9882667
REFERENCE   2  (residues 1 to 158)
  AUTHORS   Hu,S.H., Peek,J.A., Rattigan,E., Taylor,R.K. and Martin,J.L.
  TITLE     Structure of TcpG, the DsbA protein folding catalyst from Vibrio
            cholerae
  JOURNAL   J Mol Biol 268 (1), 137-146 (1997)
   PUBMED   9149147
REFERENCE   3  (residues 1 to 158)
  AUTHORS   Brito,B., Palacios,J.M., Ruiz-Argueso,T. and Imperial,J.
  TITLE     Identification of a gene for a chemoreceptor of the
            methyl-accepting type in the symbiotic plasmid of Rhizobium
            leguminosarum bv. viciae UPM791
  JOURNAL   Biochim Biophys Acta 1308 (1), 7-11 (1996)
   PUBMED   8765742
REFERENCE   4  (residues 1 to 158)
  AUTHORS   Eaton,R.W.
  TITLE     Organization and evolution of naphthalene catabolic pathways:
            sequence of the DNA encoding 2-hydroxychromene-2-carboxylate
            isomerase and trans-o-hydroxybenzylidenepyruvate hydratase-aldolase
            from the NAH7 plasmid
  JOURNAL   J Bacteriol 176 (24), 7757-7762 (1994)
   PUBMED   8002605
REFERENCE   5  (residues 1 to 158)
  AUTHORS   Denome,S.A., Stanley,D.C., Olson,E.S. and Young,K.D.
  TITLE     Metabolism of dibenzothiophene and naphthalene in Pseudomonas
            strains: complete DNA sequence of an upper naphthalene catabolic
            pathway
  JOURNAL   J Bacteriol 175 (21), 6890-6901 (1993)
   PUBMED   8226631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01323.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..158
                     /product="DsbA family protein"
                     /GO_function="GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=17278
     Region          10..156
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 mtsatfaitw dyrcpfarna hehvltglaa gadwnvgfip fslgqahvee gqpsvwekpe
       61 qdsgilalqa gvvirdeype lfpaahralf aarhdegrhl edrtviretl tavglpadev
      121 larvddggla rvqaeyeryv ashtvwgvpt fiaddqsv
//
LOCUS       WP_235949028             192 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6470 family protein [Paenibacillus glycinis].
ACCESSION   WP_235949028
VERSION     WP_235949028.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycinis
  ORGANISM  Paenibacillus glycinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039791.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20074.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Paenibacillus glycinis"
                     /db_xref="taxon:2697035"
     Protein         1..192
                     /product="DUF6470 family protein"
                     /calculated_mol_wt=21468
     Region          6..183
                     /region_name="DUF6470"
                     /note="Family of unknown function (DUF6470); pfam20074"
                     /db_xref="CDD:437906"
ORIGIN      
        1 mrlpqlqits qpavlgiqte wgvrtirser aevnvhteqp hmdvqshrpv mnvdqsatwd
       61 ainggkleel tkrlvsqtts yvqqyiqatn dkwrtiadla ktkvnpipdl ayasigrqkp
      121 alpvfgpasr lntriefsvq kpdiqvqpgn vsidvvtnqh pdiqftpgkv hytmerypkv
      181 tvtpppivdl mv
//
LOCUS       WP_235949033             223 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-binding dehydrogenase [Candidatus Frankia alpina].
ACCESSION   WP_235949033
VERSION     WP_235949033.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00107.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..223
                     /product="zinc-binding dehydrogenase"
                     /calculated_mol_wt=23728
ORIGIN      
        1 mlwsspgsag iggaaiqgak lagarvivai epvetkkdkv lelgathvat swqeapavva
       61 eatwdrgadv ficamgvgdg klvkkalrmt akrgtlvvtn ihpatetsid vnlmdltlte
      121 kriigtlygs gnpradipkl lelssvgqvd ldvmvsrtyp lddindafad lragtnlrgv
      181 lrypaavtpa rrhpcpmprr pndhrtapyp prgaaaqyee krs
//
LOCUS       WP_235949059             161 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(+)/NADH kinase, partial [Candidatus Frankia alpina].
ACCESSION   WP_235949059
VERSION     WP_235949059.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013663.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01513.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         <1..161
                     /product="NAD(+)/NADH kinase"
                     /GO_function="GO:0003951 - NAD+ kinase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
ORIGIN      
        1 vgavlgwgae rdvtvlgigg eikierlrct avavpaeela grsdllvslg gdgtmlramr
       61 ladgraapvl gvnpgrlgfl tevdmpelaa alsaidrney tveprlavda rigavtvsaf
      121 ndvavvrvpg hggsaavalr atggrssatp rtpssyrprr g
//
LOCUS       WP_235949063             137 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-binding dehydrogenase [Candidatus Frankia alpina].
ACCESSION   WP_235949063
VERSION     WP_235949063.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024989.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13602.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..137
                     /product="zinc-binding dehydrogenase"
                     /calculated_mol_wt=13922
ORIGIN      
        1 migtasrdnq eylrslgaaa tdygpglver vralapdgvd aalavsgega ladlitltgs
       61 pdrvvsigdv taadhgvvft tgaegrafys lreavtlaaa grltmpvtra lplaelgeah
      121 risetghvrg klvvvvd
//
LOCUS       WP_235949086             406 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Candidatus Frankia alpina].
ACCESSION   WP_235949086
VERSION     WP_235949086.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 406)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 406)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 406)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 406)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..406
                     /product="ATP-binding protein"
                     /calculated_mol_wt=42346
     Region          <285..405
                     /region_name="ComP"
                     /note="Signal transduction histidine kinase ComP [Signal
                     transduction mechanisms]; COG4585"
                     /db_xref="CDD:443642"
ORIGIN      
        1 mtglggaagp pwvvvhrteq rmsrmvgyar aacatfvvip lfgwdrlrhp wlavlivvaa
       61 ateaswfasr awrgpdrlsr rlvltdvafc valmlvgsra aqphernklm telvpfslva
      121 sagvgfglgl gllavaavai lmaawslavl pdvslklgsd llgfalwyvv amliarelrm
      181 lsmataaaqd aaraagrvav eqereaeslr qreithreih dyllpivdhv agggtpspal
      241 vrearrgaqr arriimdprg leprvldgdg gdggggdggd gggtpapget gfeammsavv
      301 dtfadeglal vpfvaiqgep papvcealva atrealrnvv rhsagvdevs lfvdgdagav
      361 lvvvrdrgvg fdpatvrpgg gmsgsyqavr rhggqvlvtg qpgggv
//
LOCUS       WP_235949092             388 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 6 protein [Candidatus Frankia alpina].
ACCESSION   WP_235949092
VERSION     WP_235949092.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 388)
  AUTHORS   Koivula,A., Reinikainen,T., Ruohonen,L., Valkeajarvi,A.,
            Claeyssens,M., Teleman,O., Kleywegt,G.J., Szardenings,M.,
            Rouvinen,J., Jones,T.A. and Teeri,T.T.
  TITLE     The active site of Trichoderma reesei cellobiohydrolase II: the
            role of tyrosine 169
  JOURNAL   Protein Eng 9 (8), 691-699 (1996)
   PUBMED   8875646
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013504.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01341.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..388
                     /product="glycoside hydrolase family 6 protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0030245 - cellulose catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=38663
     Region          117..371
                     /region_name="Glyco_hydro_6"
                     /note="Glycosyl hydrolases family 6; pfam01341"
                     /db_xref="CDD:426212"
ORIGIN      
        1 mrghrrrffa llwpfaglmv fagfgleqlv iepayegsgg sstvaaqpgt vapakvgval
       61 tpvpsprpaa sassaatagg laaasagaaa stgaagltav vgatagdpfa aaalyvdpag
      121 aqtlsrladr shadwfgdpd patvrtrvad rvrvvrvvrv vraagalpvl vayaipqrdc
      181 gggqsaggvt desayrawta afaagvgagp aavilepdal aqvdclapaa ataryamlgy
      241 avdqlaavga dvyldagnas whsaadtaar lrqagvarar gfalnvsnfd etadetaygd
      301 gvvvalggas hyvvdtsrng hgpaadngwc nppgrglgia ptgrtgnpra daylwikvpg
      361 esdgacnggp aagrwwldya mglasrag
//
LOCUS       WP_235949125             169 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Candidatus Frankia
            alpina].
ACCESSION   WP_235949125
VERSION     WP_235949125.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 169)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 169)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 169)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 169)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..169
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=18702
     Region          <3..167
                     /region_name="MglA"
                     /note="ABC-type sugar transport system, ATPase component
                     [Carbohydrate transport and metabolism]; COG1129"
                     /db_xref="CDD:440745"
ORIGIN      
        1 mtvpqnrrrd gvlgdltvre nltlgdlrsl trwtmidrar ekaeartlie qfdirprele
       61 fpvrllsggn qqkvaiarav rlrprvlvld eptqgvdvga rrevagiirr lkadgmaivl
      121 gtsdgdelld ladralildr grrrrvfgpg eltrsrlaha tagveghsa
//
LOCUS       WP_235949143             135 aa            linear   BCT 02-MAR-2025
DEFINITION  cation-transporting P-type ATPase [Candidatus Frankia alpina].
ACCESSION   WP_235949143
VERSION     WP_235949143.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012893.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00690.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..135
                     /product="cation-transporting P-type ATPase"
                     /calculated_mol_wt=14697
     Region          19..>87
                     /region_name="MgtA"
                     /note="Magnesium-transporting ATPase (P-type) [Inorganic
                     ion transport and metabolism]; COG0474"
                     /db_xref="CDD:440242"
ORIGIN      
        1 mtatrtmaaa gmmaaaarpi advlrdlgat veagltagea grrqarygpn avsshrarpl
       61 svlwhqvrsp llgllataav asyfvgergr rvllrrrtrr rphhrrdrrp vgrawfrqrv
      121 pgragrrgaa lpdpp
//
LOCUS       WP_235949204             239 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Candidatus
            Frankia alpina].
ACCESSION   WP_235949204
VERSION     WP_235949204.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13458.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..>239
                     /product="ABC transporter substrate-binding protein"
     Region          <1..213
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 masyakekgy krvalfvtdv paaitganal gkpvfqksgv dldvisiprg sadatsqvts
       61 aigkkpdala lvgdathcts vfkafqavga tqpkfviqpc vsktvddaap gqldgsilft
      121 psdtdsddpe aklyrtvmar ytpkrqtdgy avtgyqtvlg laralkgisg evtpasvtst
      181 lktarnitmp aghgltfscd gsaipslkal csassveatl kgtkatdvrt vnaanlfaa
//
LOCUS       WP_235949280             190 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-binding protein [Candidatus Frankia alpina].
ACCESSION   WP_235949280
VERSION     WP_235949280.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024842.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13450.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..190
                     /product="NAD(P)-binding protein"
                     /calculated_mol_wt=20076
ORIGIN      
        1 msssleaapi aivgagpggl tcarvlqnhg iavtvydlda tadarpaggs ldmhadsgqv
       61 alaaagllda fralsrpegq qvrvlgrdag vlldmvpdta pedgapeidr gqlrtlllds
      121 laagtvpvgp pgdppraarr rrppdplrrr rvrrphpghr rgrrlvpgpg aarrrrpglh
      181 rrhvrrsepr
//
LOCUS       WP_235949316             217 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Candidatus Frankia alpina].
ACCESSION   WP_235949316
VERSION     WP_235949316.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..217
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=23333
     Region          25..143
                     /region_name="NUDIX_Hydrolase"
                     /note="uncharacterized NUDIX hydrolase subfamily; cd18876"
                     /db_xref="CDD:467588"
ORIGIN      
        1 mnggvptvtr svsggeippm akpyvaagal ffddddrvll vepsykpgwd ipggfvepge
       61 spysacvrev eeelgitppi gellavdwap rpkdgwlege mllfvfdggl lsaswrerir
      121 ldmdelvnfa fvpvdevdrl lpplharrva aaarlrrtpr qagyleygeq ipvqsaaygv
      181 agrgaarrpp gpapesdlad wpsdlgalsa naresrg
//
LOCUS       WP_235949389             211 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Candidatus
            Frankia alpina].
ACCESSION   WP_235949389
VERSION     WP_235949389.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 211)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..211
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=22046
     Region          8..201
                     /region_name="PBP2_LTTR_like_3"
                     /note="The C-terminal substrate binding domain of an
                     uncharacterized LysR-type transcriptional regulator,
                     contains the type 2 periplasmic binding fold; cd08436"
                     /db_xref="CDD:176127"
     Site            order(22..23,25..26,29,33,35..41,133..138,144..145,
                     147..148)
                     /site_type="other"
                     /note="putative dimerization interface [polypeptide
                     binding]"
                     /db_xref="CDD:176127"
ORIGIN      
        1 maggmggrlt igimqcfrrg ltealaafha ehprvelrlv qapslelldr vavgaldlaf
       61 acartapagv hltplddrsm vfachaghpl aqraavslre aveedfvdyp pgwgsrtvvd
      121 atlaehglrr rlacevgdtd tlldlvahgl gvallppsld arhrdelqmi plappaptfp
      181 taivtpagat saaagilldt vlarqpapaa r
//
LOCUS       WP_235949480              55 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Candidatus Frankia
            alpina].
ACCESSION   WP_235949480
VERSION     WP_235949480.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024921.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13531.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..55
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..55
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=5747
ORIGIN      
        1 mpyivlkrtt dsaprraaat afaaylrgda grqaltaagf rtptelqgrn dpdgl
//
LOCUS       WP_235949486             399 aa            linear   BCT 02-MAR-2025
DEFINITION  effector-associated domain EAD1-containing protein [Candidatus
            Frankia alpina].
ACCESSION   WP_235949486
VERSION     WP_235949486.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 399)
  AUTHORS   Kaur,G., Iyer,L.M., Burroughs,A.M. and Aravind,L.
  TITLE     Bacterial death and TRADD-N domains help define novel apoptosis and
            immunity mechanisms shared by prokaryotes and metazoans
  JOURNAL   Elife 10, e70394 (2021)
   PUBMED   34061031
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 399)
  AUTHORS   Kaur,G., Burroughs,A.M., Iyer,L.M. and Aravind,L.
  TITLE     Highly regulated, diversifying NTP-dependent biological conflict
            systems with implications for the emergence of multicellularity
  JOURNAL   Elife 9, e52696 (2020)
   PUBMED   32101166
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039430.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19955.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..399
                     /product="effector-associated domain EAD1-containing
                     protein"
                     /calculated_mol_wt=42957
     Region          10..89
                     /region_name="EAD1"
                     /note="Effector-associated domain 1; pfam19955"
                     /db_xref="CDD:466241"
     Region          117..>222
                     /region_name="Nucleotidyl_cyc_III"
                     /note="Class III nucleotidyl cyclases; cl11967"
                     /db_xref="CDD:448371"
     Site            order(124..129,169)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143637"
     Site            order(124,169)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143637"
ORIGIN      
        1 mgslrglvmq glseveiral akafnvhfka nlllvraglt rdrvpeftgt pfdywseisa
       61 qledgllsdg rarilaaaak sfpanevfrv gsrldaspga vpgarerqrp pagtpehasl
      121 ffldarlysr rsmlgqvdwr valreivaaa varlglpaes irllqdqgdg flgivagtep
      181 kpylasdfvr elqiaqrayn dgrepggrlr lrmslhhgdv vvdgtgaagd avvvaarlid
      241 apqvrgvler ypdadlvlal speyfrstaa qrmrdldpea freidvavge kyagtawvtl
      301 pghranppld edpaeprpvd vprpvdapag vvlsppraaa ssavdlrgdt ahaatppdgv
      361 grgwaaqrpg vdewrrriad rrrsrkpsts pppfpggrt
//
LOCUS       WP_235949559             163 aa            linear   BCT 02-MAR-2025
DEFINITION  protein kinase domain-containing protein [Candidatus Frankia
            alpina].
ACCESSION   WP_235949559
VERSION     WP_235949559.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Frankia alpina
  ORGANISM  Candidatus Frankia alpina
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Frankiales;
            Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 163)
  AUTHORS   Hunter,T. and Plowman,G.D.
  TITLE     The protein kinases of budding yeast: six score and more
  JOURNAL   Trends Biochem Sci 22 (1), 18-22 (1997)
   PUBMED   9020587
REFERENCE   2  (residues 1 to 163)
  AUTHORS   Hanks,S.K. and Hunter,T.
  TITLE     Protein kinases 6. The eukaryotic protein kinase superfamily:
            kinase (catalytic) domain structure and classification
  JOURNAL   FASEB J 9 (8), 576-596 (1995)
   PUBMED   7768349
REFERENCE   3  (residues 1 to 163)
  AUTHORS   Hanks,S.K. and Quinn,A.M.
  TITLE     Protein kinase catalytic domain sequence database: identification
            of conserved features of primary structure and classification of
            family members
  JOURNAL   Methods Enzymol 200, 38-62 (1991)
   PUBMED   1956325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00069.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Candidatus Frankia alpina"
                     /db_xref="taxon:2699483"
     Protein         1..163
                     /product="protein kinase domain-containing protein"
                     /GO_function="GO:0004672 - protein kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006468 - protein phosphorylation
                     [Evidence IEA]"
                     /calculated_mol_wt=17513
     Region          16..>120
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 mtagtgdavd rrvagryrli eqlgagaygt vwrafdeilg vtaaakevri spaaslenta
       61 hilaraerea rmvaklrdhp nvvtvldvvr deglpwiime fipsvslaea irargafppg
      121 sgsrcwprss pptrpgspig tsnlrtlshs rrrfvrlgnc cgv
//
LOCUS       WP_235949576             674 aa            linear   BCT 02-MAR-2025
DEFINITION  MGH1-like glycoside hydrolase domain-containing protein
            [Paenibacillus glycinis].
ACCESSION   WP_235949576
VERSION     WP_235949576.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycinis
  ORGANISM  Paenibacillus glycinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 674)
  AUTHORS   Ndeh,D., Rogowski,A., Cartmell,A., Luis,A.S., Basle,A., Gray,J.,
            Venditto,I., Briggs,J., Zhang,X., Labourel,A., Terrapon,N.,
            Buffetto,F., Nepogodiev,S., Xiao,Y., Field,R.A., Zhu,Y.,
            O'Neil,M.A., Urbanowicz,B.R., York,W.S., Davies,G.J., Abbott,D.W.,
            Ralet,M.C., Martens,E.C., Henrissat,B. and Gilbert,H.J.
  TITLE     Complex pectin metabolism by gut bacteria reveals novel catalytic
            functions
  JOURNAL   Nature 544 (7648), 65-70 (2017)
   PUBMED   28329766
  REMARK    Erratum:[Nature. 2017 Aug 31;548(7669):612. doi:
            10.1038/nature23659.. PMID: 29411780]
REFERENCE   2  (residues 1 to 674)
  AUTHORS   Bianchetti,C.M., Elsen,N.L., Fox,B.G. and Phillips,G.N. Jr.
  TITLE     Structure of cellobiose phosphorylase from Clostridium thermocellum
            in complex with phosphate
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 67 (Pt 11),
            1345-1349 (2011)
   PUBMED   22102229
REFERENCE   3  (residues 1 to 674)
  AUTHORS   Kurakata,Y., Uechi,A., Yoshida,H., Kamitori,S., Sakano,Y.,
            Nishikawa,A. and Tonozuka,T.
  TITLE     Structural insights into the substrate specificity and function of
            Escherichia coli K12 YgjK, a glucosidase belonging to the glycoside
            hydrolase family 63
  JOURNAL   J Mol Biol 381 (1), 116-128 (2008)
   PUBMED   18586271
  REMARK    Erratum:[J Mol Biol. 2008 Nov 14;383(3):745]
REFERENCE   4  (residues 1 to 674)
  AUTHORS   Cui,Z., Maruyama,Y., Mikami,B., Hashimoto,W. and Murata,K.
  TITLE     Crystal structure of glycoside hydrolase family 78
            alpha-L-Rhamnosidase from Bacillus sp. GL1
  JOURNAL   J Mol Biol 374 (2), 384-398 (2007)
   PUBMED   17936784
REFERENCE   5  (residues 1 to 674)
  AUTHORS   Gibson,R.P., Gloster,T.M., Roberts,S., Warren,R.A., Storch de
            Gracia,I., Garcia,A., Chiara,J.L. and Davies,G.J.
  TITLE     Molecular basis for trehalase inhibition revealed by the structure
            of trehalase in complex with potent inhibitors
  JOURNAL   Angew Chem Int Ed Engl 46 (22), 4115-4119 (2007)
   PUBMED   17455176
REFERENCE   6  (residues 1 to 674)
  AUTHORS   Hidaka,M., Honda,Y., Kitaoka,M., Nirasawa,S., Hayashi,K.,
            Wakagi,T., Shoun,H. and Fushinobu,S.
  TITLE     Chitobiose phosphorylase from Vibrio proteolyticus, a member of
            glycosyl transferase family 36, has a clan GH-L-like
            (alpha/alpha)(6) barrel fold
  JOURNAL   Structure 12 (6), 937-947 (2004)
   PUBMED   15274915
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046269.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22422.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Paenibacillus glycinis"
                     /db_xref="taxon:2697035"
     Protein         1..674
                     /product="MGH1-like glycoside hydrolase domain-containing
                     protein"
                     /calculated_mol_wt=76344
     Region          227..526
                     /region_name="GDB1"
                     /note="Glycogen debranching enzyme (alpha-1,6-glucosidase)
                     [Carbohydrate transport and metabolism]; COG3408"
                     /db_xref="CDD:442634"
ORIGIN      
        1 mepsgsltls eihigslpag kvavslrars vnplvldgft lveqqtskaa afvdlpwrik
       61 pelmegpipg slilhypdsp cyyglswnyp gaeirqflsd eldhfarhtv hehvspilhg
      121 ngkghytnvf mrpialnpas slilhgmvcg gtleevharl asfaldagsc esvylaerrk
      181 lesppayaag dryafsqqlm ratlltntvf pvytkrtfir hntpgrwwds lytwdsgfig
      241 lgfadlddsr aidclnaymt epgdpeaafi hhgspvpvqh ylfqelwnrk qspeflnyfy
      301 prlrqyylfl agkingsttd vfqtgllqtw dyfynsggwd dyppqkhvhe lklepkaapv
      361 ittsqliria kilrmaaaas dnrqldteey dkdirrwsda lnayawdeea gcygyvlhne
      421 egeyegllrh gseanynrgl dglypllagv cdkertrrli dalfdeqrfw tpiglstvdq
      481 sapyyradgy wngavwmphq wffwktmfdy gypdlayria ntalelwkre teatyncyeh
      541 fivqsgrgag whhfgglsap vinwfaayye lgkvttgfnv wmlrqhckpd yteydsefhy
      601 agqadqpfhi rvnlaeglsy eaagtgcdvv cschpgggve liisnclpha sfrirpmpes
      661 srsrsshdrs gfqs
//
LOCUS       WP_235949601             783 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Paenibacillus
            glycinis].
ACCESSION   WP_235949601
VERSION     WP_235949601.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycinis
  ORGANISM  Paenibacillus glycinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Paenibacillus glycinis"
                     /db_xref="taxon:2697035"
     Protein         1..783
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=88371
     Region          40..>240
                     /region_name="dCache_1"
                     /note="Cache domain; pfam02743"
                     /db_xref="CDD:460673"
     Region          <445..527
                     /region_name="GGDEF_2"
                     /note="GGDEF-like domain; pfam17853"
                     /db_xref="CDD:465533"
     Region          697..780
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
ORIGIN      
        1 mirgiwhkrk sivftwllsy savlfvpivi slviysqash alkseihran dsllkqmryt
       61 idnqvdlmkr ldteitwndk lqnlmysnkp akeapftayq lakefrlykt syasidefyv
      121 vwdqggsilr pgnirdmrta frtihdtgam tydawsetig eagpnrfavl phvgaatsks
      181 siayvtqlps dlngretgtv vvmadaarfq qaiesvsgft gglllilnkd neillssrpd
      241 apelqpfmeg gqvrlsspri gdselfyips avsdlkyali fpsalyweka eyvrsftfas
      301 ilisligagi ltwfftrrny spiqalvqsl tdrdetatre danelrfiqr ailnarsekd
      361 rialqlqkhq qtlrsnmihr llkgkldtlv pyeeafrsfr mkqpsnefav ilfvlenees
      421 lyaklpgidl nersrlipfi ignvveelam qrqhagyvae addmmvclvn lapdvahvre
      481 dlraialeaq qflrryemel tiaisgshss wtgiaaayqe avdameykmv lgkkgiiaye
      541 dirpdpadsa rsgyyyplqv eqqlinfika gdleqasaym neitdrnfgk pvmpltlarc
      601 lifnmvgtmv kainelgdgd ggsgsgiwen hplwmdkiia cdtiqemree lhslladvce
      661 faaakrtsgv smeregslre liagvmrfie drytdanlnv naigeqfdlk gsylsrlfkn
      721 qtgeglldci hktrirqake mirtkqesin eisklvgynd aatfirvfkk yegitpgkyk
      781 evc
//
LOCUS       WP_235949612             177 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleotidyltransferase domain-containing protein [Paenibacillus
            glycinis].
ACCESSION   WP_235949612
VERSION     WP_235949612.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycinis
  ORGANISM  Paenibacillus glycinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 177)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     DNA polymerase beta belongs to an ancient nucleotidyltransferase
            superfamily
  JOURNAL   Trends Biochem Sci 20 (9), 345-347 (1995)
   PUBMED   7482698
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014021.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01909.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Paenibacillus glycinis"
                     /db_xref="taxon:2697035"
     Protein         1..177
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /GO_function="GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=19561
     Region          1..>69
                     /region_name="MJ0604"
                     /note="Predicted nucleotidyltransferase, MJ0604 family
                     [General function prediction only]; COG1708"
                     /db_xref="CDD:441314"
     Region          4..>149
                     /region_name="PRK13746"
                     /note="aminoglycoside resistance protein; Provisional"
                     /db_xref="CDD:184296"
ORIGIN      
        1 mdqsvrtlle gavrllreel sagligiyah gslamggfnp mrsdidllvv vrepserhty
       61 rriadkllrl eeeqpvgagi elsivleaya aafvhptpfe fhysahhrsr ykeeadyvcg
      121 gtadpdlaah favtysrgva lwgqpvrelt ggffgsrycr tyarrppalr aipsitc
//
LOCUS       WP_235949626             416 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome P450 [Paenibacillus glycinis].
ACCESSION   WP_235949626
VERSION     WP_235949626.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycinis
  ORGANISM  Paenibacillus glycinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 416)
  AUTHORS   Werck-Reichhart,D. and Feyereisen,R.
  TITLE     Cytochromes P450: a success story
  JOURNAL   Genome Biol 1 (6), REVIEWS3003 (2000)
   PUBMED   11178272
REFERENCE   2  (residues 1 to 416)
  AUTHORS   Graham-Lorence,S., Amarneh,B., White,R.E., Peterson,J.A. and
            Simpson,E.R.
  TITLE     A three-dimensional model of aromatase cytochrome P450
  JOURNAL   Protein Sci 4 (6), 1065-1080 (1995)
   PUBMED   7549871
REFERENCE   3  (residues 1 to 416)
  AUTHORS   Degtyarenko,K.N. and Archakov,A.I.
  TITLE     Molecular evolution of P450 superfamily and P450-containing
            monooxygenase systems
  JOURNAL   FEBS Lett 332 (1-2), 1-8 (1993)
   PUBMED   8405421
REFERENCE   4  (residues 1 to 416)
  AUTHORS   Nelson,D.R., Kamataki,T., Waxman,D.J., Guengerich,F.P.,
            Estabrook,R.W., Feyereisen,R., Gonzalez,F.J., Coon,M.J.,
            Gunsalus,I.C., Gotoh,O. et al.
  TITLE     The P450 superfamily: update on new sequences, gene mapping,
            accession numbers, early trivial names of enzymes, and nomenclature
  JOURNAL   DNA Cell Biol 12 (1), 1-51 (1993)
   PUBMED   7678494
REFERENCE   5  (residues 1 to 416)
  AUTHORS   Guengerich,F.P.
  TITLE     Reactions and significance of cytochrome P-450 enzymes
  JOURNAL   J Biol Chem 266 (16), 10019-10022 (1991)
   PUBMED   2037557
REFERENCE   6  (residues 1 to 416)
  AUTHORS   Nebert,D.W. and Gonzalez,F.J.
  TITLE     P450 genes: structure, evolution, and regulation
  JOURNAL   Annu Rev Biochem 56, 945-993 (1987)
   PUBMED   3304150
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00067.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Paenibacillus glycinis"
                     /db_xref="taxon:2697035"
     Protein         1..416
                     /product="cytochrome P450"
                     /GO_function="GO:0004497 - monooxygenase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=46825
     Region          47..411
                     /region_name="P450_EryK-like"
                     /note="cytochrome P450 EryK and similar cytochrome P450s;
                     cd11032"
                     /db_xref="CDD:410658"
     Site            order(95,97..98,180..181,202,249,252..254,256..257,304,
                     402..403)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410658"
     Site            order(96..97,104,108,115,159,249..250,253..254,257..258,
                     261,299,303,305,328,355..357,360..361,363..365,368..369)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410658"
ORIGIN      
        1 meltsrtvsa ekpsaveefk rtegvllmsn mpdmrldpyp wyasmletnp vtfssefraf
       61 lvfraddvrk vlsdyqtfss aifdglsldl pfenqltgmd pprhtqiral athaftpkav
      121 leleprmnli vnclldemla kqesdfvhdf aipfpitvia eilgvpdkdr vkfkywsdvi
      181 vrisdrllsg lsdslpehia aynemtdffr sllqerrrqp qgdlisrlal aevegrqltd
      241 measnfcvil mvagnetttn lltnamrtfa ehpdqwellr qeprlipqav deimryrtsv
      301 qfitrivkqd geiggvkika gervaaflga anrdpakyen pnvfditrps ganmtfghgi
      361 hfclgaplar lemtaalkem ihrvdtfkvp evavleplna inllglkslp lqiigr
//
LOCUS       WP_235949637             295 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Paenibacillus
            glycinis].
ACCESSION   WP_235949637
VERSION     WP_235949637.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycinis
  ORGANISM  Paenibacillus glycinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 295)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Paenibacillus glycinis"
                     /db_xref="taxon:2697035"
     Protein         <1..295
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..263
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation (C) domain of non-ribosomal
                     peptide synthetases(NRPSs) and similar domains including
                     the C-domain of SgcC5, a free-standing NRPS with both
                     ester- and amide- bond forming activity; cd19531"
                     /db_xref="CDD:380454"
ORIGIN      
        1 lyageelaal riqykdyaaw qqerqfseam kehesywlnr fagqlpvlql padyprpakq
       61 rfegnwvtft lneaitselr rlvnetgttl ymvlltmykv mlyqyteqed iivgtpisgr
      121 gheslerlig mfvntlalrs yptgnkafae fleevkqqtl eafeheeypf eglveqlnkv
      181 pdasrnplfd tmfvlqnmgl phlelpklli tpyefknrva kfdlllease gakeikcrln
      241 yntalfkdkt aermadyfls liefimnnry valkdiplss kkrdrfieee irfnf
//
LOCUS       WP_235949725             350 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Paenibacillus apii].
ACCESSION   WP_235949725
VERSION     WP_235949725.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus apii
  ORGANISM  Paenibacillus apii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 350)
  AUTHORS   Coquille,S., Roux,C., Fitzpatrick,T.B. and Thore,S.
  TITLE     The last piece in the vitamin B1 biosynthesis puzzle: structural
            and functional insight into yeast
            4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate (HMP-P)
            synthase
  JOURNAL   J Biol Chem 287 (50), 42333-42343 (2012)
   PUBMED   23048037
REFERENCE   2  (residues 1 to 350)
  AUTHORS   Wightman,R. and Meacock,P.A.
  TITLE     The THI5 gene family of Saccharomyces cerevisiae: distribution of
            homologues among the hemiascomycetes and functional redundancy in
            the aerobic biosynthesis of thiamin from pyridoxine
  JOURNAL   Microbiology (Reading) 149 (Pt 6), 1447-1460 (2003)
   PUBMED   12777485
REFERENCE   3  (residues 1 to 350)
  AUTHORS   Rodriguez-Navarro,S., Llorente,B., Rodriguez-Manzaneque,M.T.,
            Ramne,A., Uber,G., Marchesan,D., Dujon,B., Herrero,E.,
            Sunnerhagen,P. and Perez-Ortin,J.E.
  TITLE     Functional analysis of yeast gene families involved in metabolism
            of vitamins B1 and B6
  JOURNAL   Yeast 19 (14), 1261-1276 (2002)
   PUBMED   12271461
REFERENCE   4  (residues 1 to 350)
  AUTHORS   Maundrell,K.
  TITLE     nmt1 of fission yeast. A highly transcribed gene completely
            repressed by thiamine
  JOURNAL   J Biol Chem 265 (19), 10857-10864 (1990)
   PUBMED   2358444
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020650.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09084.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Paenibacillus apii"
                     /db_xref="taxon:1850370"
     Protein         1..350
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=37430
     Region          55..268
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mkfftrskam llsaltmllv ttacggssps gdaaassaps qapivsaspa epahkltlml
       61 dwypnavhsf lytaqeqgyf skqgldveiq mpadtndalk lvaagkvdla lsyqpqvlma
      121 rgekipvkal asivrhplth lmvpadssvh spkdlagknv gyssiplyea ivktmvktdg
      181 gdpdkvnfvd vgydlipais tgqtdaimga finheqlilq keghpvnsid paiygvpdys
      241 elvlvasdeg vgtrkddfsk flaamregqa yvkehpdeal aillkhedtt apldkdietq
      301 slkvllplmd agdkpfgyqd paswdkvrqw lsdngllpag iqagdafvnl
//
LOCUS       WP_235949761             407 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Paenibacillus apii].
ACCESSION   WP_235949761
VERSION     WP_235949761.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus apii
  ORGANISM  Paenibacillus apii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Paenibacillus apii"
                     /db_xref="taxon:1850370"
     Protein         1..407
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45740
     Region          14..381
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(21..22,25..26,29,61,112..113,115..117,120,138,
                     141..142,145,215,218..219,222..224,227,254,258,309..310,
                     314,318,339,342..343,346..347,350)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mqdnsekpyt ftslkwfnff vygtmvlfts ffqlylqdvg mnkleigvlm sigpfvsifa
       61 npfwglwagr ypnirvivll mlagtllfsq lifqantyet iyaaiilyff cqtplfaqsn
      121 tlvlsyiygs eqrfgsfrlw gslgwaltai aagpiidygg vsvlsylfav llglsivsla
      181 tlpklrhsig iapmplrgfh vlfknpyflf fiffgilvsi pntvnntfms lyindmggsk
      241 tmvglavfls sivevgvfml cdrylrrkis vligwlalvs llfalrwwlm aqsttpleva
      301 fiqilhsitf ggffyvgtel tmlliprpyr ssaqalytls wsgisgmmgg ilggwlfqyl
      361 gaqsmyefcv flaligaigy agmwvfvrrn hyrphqvted aheedgv
//
LOCUS       WP_235949947             159 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Candidatus Regiella insecticola].
ACCESSION   WP_235949947
VERSION     WP_235949947.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Regiella insecticola (Candidatus Adiacens aphidicola)
  ORGANISM  Candidatus Regiella insecticola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; aphid secondary symbionts;
            Candidatus Regiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024898.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13508.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Candidatus Regiella insecticola"
                     /db_xref="taxon:138073"
     Protein         1..159
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=18122
     Region          47..157
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
     Site            order(109..111,121..122)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
ORIGIN      
        1 mscsllhnil didhrknldw dqkgynlidk kimkhqvsna kkqdylelie vweksvqath
       61 dflpdkeieq lkllildkyf davlikcikn iegkiigfsg vanhkiemlf vapaaqgqgi
      121 gsalcqyaie yqeatkvdvn eqnprarefy ekigfnvvs
//
LOCUS       WP_235949967             244 aa            linear   BCT 02-MAR-2025
DEFINITION  matrixin family metalloprotease [Candidatus Regiella insecticola].
ACCESSION   WP_235949967
VERSION     WP_235949967.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Regiella insecticola (Candidatus Adiacens aphidicola)
  ORGANISM  Candidatus Regiella insecticola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; aphid secondary symbionts;
            Candidatus Regiella.
REFERENCE   1  (residues 1 to 244)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
REFERENCE   2  (residues 1 to 244)
  AUTHORS   Gooley,P.R., O'Connell,J.F., Marcy,A.I., Cuca,G.C., Salowe,S.P.,
            Bush,B.L., Hermes,J.D., Esser,C.K., Hagmann,W.K., Springer,J.P. et
            al.
  TITLE     The NMR structure of the inhibited catalytic domain of human
            stromelysin-1
  JOURNAL   Nat Struct Biol 1 (2), 111-118 (1994)
   PUBMED   7656014
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00413.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Candidatus Regiella insecticola"
                     /db_xref="taxon:138073"
     Protein         1..244
                     /product="matrixin family metalloprotease"
                     /EC_number="3.4.24.-"
                     /GO_component="GO:0031012 - extracellular matrix [Evidence
                     IEA]"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=27835
     Region          87..218
                     /region_name="ZnMc"
                     /note="Zinc-dependent metalloprotease. This super-family
                     of metalloproteases contains two major branches, the
                     astacin-like proteases and the adamalysin/reprolysin-like
                     proteases. Both branches have wide phylogenetic
                     distribution, and contain sub-families, which...; cl00064"
                     /db_xref="CDD:469599"
     Site            order(175..176,179,185)
                     /site_type="active"
                     /db_xref="CDD:239804"
ORIGIN      
        1 mntmeepgnt isdvglttst eqkpaipqsv ldeelatqlv eymikiqfip glqpdkradk
       61 edemtfrylt psyqdvvqqh ikpifrtglt tftvlqreit qfildeiaek tglefrqveg
      121 depadmffgn fhapedtigg fvdpitvppe hnviwmnarq eshsnpelfk svltheighv
      181 lglehsddlk dprtimsysw tlkefqvadf lalwslhgld snpqseerir ageqarpqrw
      241 arik
//
LOCUS       WP_235949986             131 aa            linear   BCT 02-MAR-2025
DEFINITION  IS630 transposase-related protein [Candidatus Regiella
            insecticola].
ACCESSION   WP_235949986
VERSION     WP_235949986.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Regiella insecticola (Candidatus Adiacens aphidicola)
  ORGANISM  Candidatus Regiella insecticola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; aphid secondary symbionts;
            Candidatus Regiella.
REFERENCE   1  (residues 1 to 131)
  AUTHORS   Cassier-Chauvat,C., Poncelet,M. and Chauvat,F.
  TITLE     Three insertion sequences from the cyanobacterium Synechocystis
            PCC6803 support the occurrence of horizontal DNA transfer among
            bacteria
  JOURNAL   Gene 195 (2), 257-266 (1997)
   PUBMED   9305771
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013842.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01710.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Candidatus Regiella insecticola"
                     /db_xref="taxon:138073"
     Protein         1..131
                     /product="IS630 transposase-related protein"
                     /calculated_mol_wt=14316
     Region          1..>93
                     /region_name="HTH_Tnp_IS630"
                     /note="Transposase; pfam01710"
                     /db_xref="CDD:279973"
ORIGIN      
        1 mtyplkfrqh vlaikkkeal tyaetadrfg vgsaslmrwa krlepcltrn kpatkinraa
       61 lildvetypd asqheraqrm gvsargicda lkragfsyng clfwrlpavl vgltgvplpv
      121 rypeggggla q
//
LOCUS       WP_235950060             279 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphatase PAP2 family protein [Paenibacillus apii].
ACCESSION   WP_235950060
VERSION     WP_235950060.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus apii
  ORGANISM  Paenibacillus apii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025736.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14378.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Paenibacillus apii"
                     /db_xref="taxon:1850370"
     Protein         1..279
                     /product="phosphatase PAP2 family protein"
                     /calculated_mol_wt=31230
     Region          83..250
                     /region_name="PAP2_like"
                     /note="PAP2_like proteins, a super-family of histidine
                     phosphatases and vanadium haloperoxidases, includes type 2
                     phosphatidic acid phosphatase or lipid phosphate
                     phosphatase (LPP), Glucose-6-phosphatase,
                     Phosphatidylglycerophosphatase B and bacterial acid...;
                     cl00474"
                     /db_xref="CDD:469784"
     Site            order(149,157,193..195,229,235,239)
                     /site_type="active"
                     /db_xref="CDD:238813"
ORIGIN      
        1 mlyqsmntvs wftvvivfll iglvsrqnpf kavvylakei lrsyklvlli agisgvlaln
       61 kyelqiekkm hltsdftgfv fgleghfvqg vqhlfyapwl tpiivffyvf mlqsvlaasl
      121 gvylmdknrl llyatcyavi lnyaiaipfy lyfpvnevws yapagvrfvm ldvfprfeqe
      181 yralsgldnc fpslhtsisl tsallafrsg nrrwmtiagi saaviifgif ylgihwltdm
      241 vggtllavls tslsvklakl tlresepalr vgseaapfq
//
LOCUS       WP_235950074              53 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: TraY domain-containing protein [Candidatus Regiella].
ACCESSION   WP_235950074
VERSION     WP_235950074.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Regiella
  ORGANISM  Candidatus Regiella
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; aphid secondary symbionts.
REFERENCE   1  (residues 1 to 53)
  AUTHORS   Chu,C., Chiu,C.H., Chu,C.H. and Ou,J.T.
  TITLE     Nucleotide and amino acid sequences of
            oriT-traM-traJ-traY-traA-traL regions and mobilization of virulence
            plasmids of Salmonella enterica serovars enteritidis,
            gallinarum-pullorum, and typhimurium
  JOURNAL   J Bacteriol 184 (11), 2857-2862 (2002)
   PUBMED   12003924
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017333.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05509.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..53
                     /organism="Candidatus Regiella"
                     /db_xref="taxon:568988"
     Protein         1..53
                     /product="TraY domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=5777
     Region          2..50
                     /region_name="TraY"
                     /note="TraY domain; cl27023"
                     /db_xref="CDD:452705"
ORIGIN      
        1 mvtvkisata nslltisalk skrskkcese lrledhlrkf ssissigvte kre
//
LOCUS       WP_235950087             257 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase N-terminal domain-containing protein
            [Candidatus Regiella insecticola].
ACCESSION   WP_235950087
VERSION     WP_235950087.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Regiella insecticola (Candidatus Adiacens aphidicola)
  ORGANISM  Candidatus Regiella insecticola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; aphid secondary symbionts;
            Candidatus Regiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025039.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13655.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Candidatus Regiella insecticola"
                     /db_xref="taxon:138073"
     Protein         1..257
                     /product="reverse transcriptase N-terminal
                     domain-containing protein"
                     /calculated_mol_wt=28776
     Region          31..112
                     /region_name="RVT_N"
                     /note="N-terminal domain of reverse transcriptase;
                     pfam13655"
                     /db_xref="CDD:433382"
     Region          74..>249
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            order(200..205,243)
                     /site_type="other"
                     /note="putative NTP binding site [chemical binding]"
                     /db_xref="CDD:238828"
     Site            244
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238828"
ORIGIN      
        1 mqenfqnlin gakqmtdvik ragaastsvk wqainwpamk qqvlrlqiri akamregryg
       61 kvkalqwllt hshaakllav krvsqnkgsk tagtdgitsr tdnhklaave qlrrrgyrak
      121 plrrvyipkk ngklrplgip cmsdkaqqal yllalepvse tvsdknaygf rpkrsaadai
      181 eqcfkalcrk tsaqwilegd inacfdeigh pwliehvltd ksmlrqwlid kglfyhtdtg
      241 tpqggiitpq tilqtfa
//
LOCUS       WP_235950252             405 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramoyl-L-alanine amidase [Paenibacillus apii].
ACCESSION   WP_235950252
VERSION     WP_235950252.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus apii
  ORGANISM  Paenibacillus apii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 405)
  AUTHORS   Kuroda,A., Sugimoto,Y., Funahashi,T. and Sekiguchi,J.
  TITLE     Genetic structure, isolation and characterization of a Bacillus
            licheniformis cell wall hydrolase
  JOURNAL   Mol Gen Genet 234 (1), 129-137 (1992)
   PUBMED   1495475
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013670.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01520.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Paenibacillus apii"
                     /db_xref="taxon:1850370"
     Protein         1..405
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /EC_number="3.5.1.28"
                     /GO_function="GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=42337
     Region          57..197
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          210..388
                     /region_name="AmiC"
                     /note="N-acetylmuramoyl-L-alanine amidase [Cell
                     wall/membrane/envelope biogenesis]; COG0860"
                     /db_xref="CDD:440621"
ORIGIN      
        1 mnkhihsfpg fgpdnrdrgn rsekrsgfaa lkrlawlaag msvtilglal ssytvradsy
       61 takvyatsln vrsepangaa vkgsvkggsl vtvteeqhgw arisagnmtg wvagyylkka
      121 ggsaasaqts gtlpktlaag ggrstatvta dslrirsgpg tgyeavgslk ardvvtvlsr
      181 rsgwlsirta sgaagwiaep yvtagssasa aglrpvnasr stsaglrgkr ivvdpghggd
      241 dpgmigttfg tmekdlnlqt alylrdylta agadvtmtrt rgdqrpslss rarlapevsa
      301 dafisvhyns spkkisgtlt ffysesddlm larsiehrlg dgiglksngv sfgdyhilre
      361 netpaalvel gfltspgdes lvrktsyqkk aakaiakgia dyfsn
//
LOCUS       WP_235950387             236 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Phycicoccus flavus].
ACCESSION   WP_235950387
VERSION     WP_235950387.1
KEYWORDS    RefSeq.
SOURCE      Phycicoccus flavus
  ORGANISM  Phycicoccus flavus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Intrasporangiaceae; Phycicoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024824.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13432.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Phycicoccus flavus"
                     /db_xref="taxon:2502783"
     Protein         1..236
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=25204
     Region          <14..>188
                     /region_name="PEP_TPR_lipo"
                     /note="putative PEP-CTERM system TPR-repeat lipoprotein;
                     TIGR02917"
                     /db_xref="CDD:274350"
ORIGIN      
        1 mqlrtlsken aegvakhlvm vavfleadei daalahaeta vrragrvpaa realgmvayr
       61 sgdfaralte frtvrrlsgs shllplmvdc erglgrhtra lelaaspeak dltaaervel
      121 aivvsgvrrd ldqpdaalla lqvpelargp kagvhrlhya ygdalvslgr adearewflr
      181 aiegdtenet daverleeld gvaftdlgpa eddeavgvap tppdeqdgad epgspt
//
LOCUS       WP_235950405             215 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Phycicoccus flavus].
ACCESSION   WP_235950405
VERSION     WP_235950405.1
KEYWORDS    RefSeq.
SOURCE      Phycicoccus flavus
  ORGANISM  Phycicoccus flavus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Intrasporangiaceae; Phycicoccus.
REFERENCE   1  (residues 1 to 215)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Phycicoccus flavus"
                     /db_xref="taxon:2502783"
     Protein         1..215
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=22547
     Region          1..204
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mtapvgvlvv ddhpvfregf aallrsidev evlgtastgq ealrkvaelr pavvvmdvam
       61 peldgieatr rlatshpevg vvvltmseed stifdavrag argyllkgae pdevvravtt
      121 vaaggvvfga vlagriaeff ahpraeaasp fpqlsprehe ildlvaggls ngqiaarlfl
      181 sqktvrnhvs avltklqaad raeaiirard aglgr
//
LOCUS       WP_235949940             133 aa            linear   BCT 02-MAR-2025
DEFINITION  Hpt domain-containing protein [Candidatus Regiella insecticola].
ACCESSION   WP_235949940
VERSION     WP_235949940.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Regiella insecticola (Candidatus Adiacens aphidicola)
  ORGANISM  Candidatus Regiella insecticola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; aphid secondary symbionts;
            Candidatus Regiella.
REFERENCE   1  (residues 1 to 133)
  AUTHORS   Porter,S.W., Xu,Q. and West,A.H.
  TITLE     Ssk1p response regulator binding surface on histidine-containing
            phosphotransfer protein Ypd1p
  JOURNAL   Eukaryot Cell 2 (1), 27-33 (2003)
   PUBMED   12582120
REFERENCE   2  (residues 1 to 133)
  AUTHORS   Kato,M., Mizuno,T., Shimizu,T. and Hakoshima,T.
  TITLE     Insights into multistep phosphorelay from the crystal structure of
            the C-terminal HPt domain of ArcB
  JOURNAL   Cell 88 (5), 717-723 (1997)
   PUBMED   9054511
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013767.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01627.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Candidatus Regiella insecticola"
                     /db_xref="taxon:138073"
     Protein         1..133
                     /product="Hpt domain-containing protein"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=15004
     Region          <18..126
                     /region_name="PRK11107"
                     /note="hybrid sensory histidine kinase BarA; Provisional"
                     /db_xref="CDD:236848"
ORIGIN      
        1 msilcflppy fesiyillal qqaankedla yellsmllgs lpsitkqiqd mmnkeqnden
       61 thaailslih klhgscgytg tprlqqiclt iesqlrqkia lqqlqpewle lldeienvtq
      121 aaqqqidglq hrc
//
LOCUS       WP_235950323             127 aa            linear   BCT 02-MAR-2025
DEFINITION  Rv2175c family DNA-binding protein [Phycicoccus flavus].
ACCESSION   WP_235950323
VERSION     WP_235950323.1
KEYWORDS    RefSeq.
SOURCE      Phycicoccus flavus
  ORGANISM  Phycicoccus flavus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Intrasporangiaceae; Phycicoccus.
REFERENCE   1  (residues 1 to 127)
  AUTHORS   Cohen-Gonsaud,M., Barthe,P., Canova,M.J., Stagier-Simon,C.,
            Kremer,L., Roumestand,C. and Molle,V.
  TITLE     The Mycobacterium tuberculosis Ser/Thr kinase substrate Rv2175c is
            a DNA-binding protein regulated by phosphorylation
  JOURNAL   J Biol Chem 284 (29), 19290-19300 (2009)
   PUBMED   19457863
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037332.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18367.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Phycicoccus flavus"
                     /db_xref="taxon:2502783"
     Protein         1..127
                     /product="Rv2175c family DNA-binding protein"
                     /calculated_mol_wt=13897
     Region          19..>56
                     /region_name="HTH_17"
                     /note="Helix-turn-helix domain; pfam12728"
                     /db_xref="CDD:463684"
     Region          69..122
                     /region_name="Rv2175c_C"
                     /note="Rv2175c C-terminal domain of unknown function;
                     pfam18367"
                     /db_xref="CDD:436442"
ORIGIN      
        1 msdpvpepap dvetlvpswl tvpdlaerls mrlsdvrrli eerellalrv gerrvvavpa
       61 gflddegvip alrgtftvla dggmddteiv rwlhtpdgtl pvpgtpldai ragfktevrr
      121 rameeaf
//
LOCUS       WP_235950541             610 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Phycicoccus flavus].
ACCESSION   WP_235950541
VERSION     WP_235950541.1
KEYWORDS    RefSeq.
SOURCE      Phycicoccus flavus
  ORGANISM  Phycicoccus flavus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Intrasporangiaceae; Phycicoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10170721
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Phycicoccus flavus"
                     /db_xref="taxon:2502783"
     Protein         1..610
                     /product="ABC transporter substrate-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=65491
     Region          72..591
                     /region_name="PBP2_clavulanate_OppA2"
                     /note="The substrate-binding domain of an oligopeptide
                     binding protein (OppA2) from the biosynthesis pathway of
                     the beta-lactamase inhibitor clavulanic acid contains the
                     type 2 periplasmic binding fold; cd08506"
                     /db_xref="CDD:173871"
     Site            order(90,92,95,449,482,500..501)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:173871"
ORIGIN      
        1 mpeqdpsptr serrrsrrrr rpwrvallvv llvaavgaag gyaltrqtpt ptpetmptsa
       61 vgdrvttpgg vvnalslgpv ptwdpqrlaa rgdtafaerv fartltayap dtdpekqarl
      121 vgdlatdtgt asddlktwtf tlrdgvmwqd gtpvtckdva ygisrtfatg ritggptdal
      181 avlaiprnsd gtstyegpya tgksakkgrq afekavscdg rkitftlsmp vgdfdemltq
      241 pafgpvkksv drgedgtwdi fsagpymlqg tweegrggtf vrnphwsads dpvrkaypde
      301 iryqegletq tvaqqvmadn aagresvslg sappaiqqhi tavqsleers vnprtgivdy
      361 lvpnvrskvf edeqvrlala tatnreayvt aigggtaadp alslvphglp aahdddpvga
      421 gtrgdparak ailekagvdt pveftiayrs dptsdkaiaa lvagwqqagf epktmpvtdd
      481 yfstiadkda rkdidvfwsn wapawasast ilpplfdsti nitktgpgrd ygywededld
      541 armakvsaiv drgerekawa evdrtlleqg ayiglaerra lyiagsdirn lsanavlggv
      601 vefadiavap
//
LOCUS       WP_235950635             202 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc finger domain-containing protein [Phycicoccus flavus].
ACCESSION   WP_235950635
VERSION     WP_235950635.1
KEYWORDS    RefSeq.
SOURCE      Phycicoccus flavus
  ORGANISM  Phycicoccus flavus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Intrasporangiaceae; Phycicoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018531.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06827.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Phycicoccus flavus"
                     /db_xref="taxon:2502783"
     Protein         1..202
                     /product="zinc finger domain-containing protein"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=22354
     Region          <2..185
                     /region_name="Nei"
                     /note="Formamidopyrimidine-DNA glycosylase [Replication,
                     recombination and repair]; COG0266"
                     /db_xref="CDD:440036"
ORIGIN      
        1 magqvrlrmv srthvgdlrg pivcelvspq ewsevraglg adplrgqvlp eevldrlhrt
       61 rraigavlld qtvvagvgnv yraellhrha vdphtparrv pdevvrllwd dlvrlmplgv
      121 rtgriivade dveraqalld agrtgrirpa yavyrrhgrp cprcattvvk etmagrnlfw
      181 cpgcqdaddr ahprpwqaaa sp
//
LOCUS       WP_235950738             408 aa            linear   BCT 02-MAR-2025
DEFINITION  CDP-glycerol glycerophosphotransferase family protein [Phycicoccus
            flavus].
ACCESSION   WP_235950738
VERSION     WP_235950738.1
KEYWORDS    RefSeq.
SOURCE      Phycicoccus flavus
  ORGANISM  Phycicoccus flavus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Intrasporangiaceae; Phycicoccus.
REFERENCE   1  (residues 1 to 408)
  AUTHORS   Fitzgerald,S.N. and Foster,T.J.
  TITLE     Molecular analysis of the tagF gene, encoding
            CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase of
            Staphylococcus epidermidis ATCC 14990
  JOURNAL   J Bacteriol 182 (4), 1046-1052 (2000)
   PUBMED   10648531
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016357.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04464.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Phycicoccus flavus"
                     /db_xref="taxon:2502783"
     Protein         1..408
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0047355 - CDP-glycerol
                     glycerophosphotransferase activity [Evidence IEA]"
                     /calculated_mol_wt=44405
     Region          <115..324
                     /region_name="Glyphos_transf"
                     /note="CDP-Glycerol:Poly(glycerophosphate)
                     glycerophosphotransferase; cl42225"
                     /db_xref="CDD:478041"
ORIGIN      
        1 mpllkdvrsa rtlvagslrr rraraawaqa aaagtpdhte veglvffpdp pvnayqvrqw
       61 yepmrvlagr hplavvttdp etavalaaec plpvlwhrsv geteafmegr rigavfyvnq
      121 nvtnfrmmrh rrpahvfvnh gesdkdymas nqlkaydytf vagqaaveri earlvdfdag
      181 rhlvrvgrpq vdfpghapdl pddgrtvvly aptwegdrps mayssvrshg pamlrallat
      241 grhrvvyrph prtgvsdply arahaelvaq varaeesdpg arhvvdtdaa ygwqlaaada
      301 cvtdvsavaf dflatgkplv ltapsspqal vdegglagml tplaareagr vverldaels
      361 ggaredhari veryfgdttp gaatdrfvaa sseiigsrla lypepvrr
//
LOCUS       WP_235950862             176 aa            linear   BCT 02-MAR-2025
DEFINITION  nuclear transport factor 2 family protein [Permianibacter
            fluminis].
ACCESSION   WP_235950862
VERSION     WP_235950862.1
KEYWORDS    RefSeq.
SOURCE      Permianibacter fluminis
  ORGANISM  Permianibacter fluminis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Permianibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024092.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12680.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Permianibacter fluminis"
                     /db_xref="taxon:2738515"
     Protein         1..176
                     /product="nuclear transport factor 2 family protein"
                     /calculated_mol_wt=18622
     Region          1..>39
                     /region_name="DUF333"
                     /note="Domain of unknown function (DUF333); cl46806"
                     /db_xref="CDD:481146"
     Region          45..175
                     /region_name="COG5485"
                     /note="Predicted ester cyclase [General function
                     prediction only]"
                     /db_xref="CDD:444236"
ORIGIN      
        1 mkkqvmgfvm aaslvlaacg qstppaetap vaeaakapav dpvkviddym aawnshnada
       61 aashfadnvt yldasvgtpq qgrdaardnv ikvfmtavpd chwvrngapi vsadgiafew
      121 tfsgtntgaw gpdtpatgks fsfngvsfir lqgdkiayqg dyydalnfnk qmgwlq
//
LOCUS       WP_235950791             255 aa            linear   BCT 02-MAR-2025
DEFINITION  styrene monooxygenase/indole monooxygenase family protein
            [Heyndrickxia shackletonii].
ACCESSION   WP_235950791
VERSION     WP_235950791.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia shackletonii
  ORGANISM  Heyndrickxia shackletonii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
REFERENCE   1  (residues 1 to 255)
  AUTHORS   Ukaegbu,U.E., Kantz,A., Beaton,M., Gassner,G.T. and Rosenzweig,A.C.
  TITLE     Structure and ligand binding properties of the epoxidase component
            of styrene monooxygenase
  JOURNAL   Biochemistry 49 (8), 1678-1688 (2010)
   PUBMED   20055497
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037663.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17885.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Heyndrickxia shackletonii"
                     /db_xref="taxon:157838"
     Protein         1..255
                     /product="styrene monooxygenase/indole monooxygenase
                     family protein"
                     /calculated_mol_wt=28826
     Region          4..109
                     /region_name="Smoa_sbd"
                     /note="Styrene monooxygenase A putative substrate binding
                     domain; pfam17885"
                     /db_xref="CDD:436116"
ORIGIN      
        1 myrkngplfp fpteesltpf qtpqrkcivg yfegikannp lgvsvtvlpe lgemfeipal
       61 teqgpvtilf vmvvpksdld vfkgikyaed ftlkmrntvq hffpeihtri deenfaltdd
      121 naflqtaiap virkpyslvk nklvvgcgds vflndpitgq gcnlssycae qlyetlmkyk
      181 dskwdieage yywnrtkqyv tevtgwtnam tkplpnhvvq lllqgaqdqa kadeiaewfa
      241 nptkayeaff lnnin
//
LOCUS       WP_235951104             222 aa            linear   BCT 02-MAR-2025
DEFINITION  prolyl oligopeptidase family serine peptidase [Permianibacter
            fluminis].
ACCESSION   WP_235951104
VERSION     WP_235951104.1
KEYWORDS    RefSeq.
SOURCE      Permianibacter fluminis
  ORGANISM  Permianibacter fluminis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Permianibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012546.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00326.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Permianibacter fluminis"
                     /db_xref="taxon:2738515"
     Protein         1..222
                     /product="prolyl oligopeptidase family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=24935
     Region          <1..221
                     /region_name="PtrB"
                     /note="Protease II [Amino acid transport and metabolism];
                     COG1770"
                     /db_xref="CDD:441376"
ORIGIN      
        1 mdpyfsaarl slldrgfvya lahirggqem grrwyesgkl lnkkntftdf idvteflvkq
       61 qyaakdkvfa nggsaggllm gavanmkpef yrgiiaavpf vdvvttmlde siplttnefd
      121 ewgnpkekpy ydymlsyspy dnvsrqaypa mlvstglnds qvqyyepakw vaklramktd
      181 snpllfrinm eaghggksgr fqklretakd ysfilaqlgq kp
//
LOCUS       WP_235951164             547 aa            linear   BCT 02-MAR-2025
DEFINITION  alginate export family protein [Crateriforma spongiae].
ACCESSION   WP_235951164
VERSION     WP_235951164.1
KEYWORDS    RefSeq.
SOURCE      Crateriforma spongiae
  ORGANISM  Crateriforma spongiae
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Planctomycetales; Planctomycetaceae; Crateriforma.
REFERENCE   1  (residues 1 to 547)
  AUTHORS   Whitney,J.C., Hay,I.D., Li,C., Eckford,P.D., Robinson,H.,
            Amaya,M.F., Wood,L.F., Ohman,D.E., Bear,C.E., Rehm,B.H. and
            Howell,P.L.
  TITLE     Structural basis for alginate secretion across the bacterial outer
            membrane
  JOURNAL   Proc Natl Acad Sci U S A 108 (32), 13083-13088 (2011)
   PUBMED   21778407
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024765.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13372.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Crateriforma spongiae"
                     /db_xref="taxon:2724528"
     Protein         1..547
                     /product="alginate export family protein"
                     /calculated_mol_wt=60751
     Region          149..520
                     /region_name="Alginate_exp"
                     /note="Alginate export; cl16257"
                     /db_xref="CDD:472886"
ORIGIN      
        1 mhrskilrml wgsrwiatpl aavlmaagan andylaaege lqsvtvqttg eeisgdsiqp
       61 mvdfealese qaynaqvgfh ecapaatcnc cqttcctkek keaatkamks afagvfyank
      121 fdylndpcyd gpsfcgdclk gmstplgtls lggetrfryh nernhrgvgi tgrddnfwlf
      181 rqrlyadwkl ndmvrfyaeg lhaesmgeqf narpievnnm dflnlfvdvn llsgnagklt
      241 arlgrqelly gaqrtvspld wantrrtfeg vrllyqnddt sldgfwtefv pvdprdgdeg
      301 dnnqqfygvy gtqkntalgq legyylgydn dtanfsfhti ggrssgssdg gilydfesay
      361 qfgensngsd hsaafvtagl grkvntalws ptvwlyydya sgdddfanaa pgddgynhlf
      421 plahkyngfm dlfgrrnlhd lnvfsltpls dkvslilwyh yfalaeattp ysvvmtpynt
      481 tspagdrelg heidvlfnin lnprnnilvg yshfsagdyy dttmglpagv addadadffy
      541 aqfqtry
//
LOCUS       WP_235951176             584 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar basal body P-ring protein FlgI [Crateriforma spongiae].
ACCESSION   WP_235951176
VERSION     WP_235951176.1
KEYWORDS    RefSeq.
SOURCE      Crateriforma spongiae
  ORGANISM  Crateriforma spongiae
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Planctomycetales; Planctomycetaceae; Crateriforma.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014206.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02119.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Crateriforma spongiae"
                     /db_xref="taxon:2724528"
     Protein         1..584
                     /product="flagellar basal body P-ring protein FlgI"
                     /GO_component="GO:0009428 - bacterial-type flagellum basal
                     body, distal rod, P ring [Evidence IEA]"
                     /GO_component="GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA]"
                     /GO_function="GO:0005198 - structural molecule activity
                     [Evidence IEA]"
                     /GO_process="GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /calculated_mol_wt=63490
     Region          <131..>291
                     /region_name="flgI"
                     /note="flagellar basal body P-ring protein FlgI; cl19280"
                     /db_xref="CDD:473157"
     Region          326..430
                     /region_name="HEAT"
                     /note="HEAT repeat [General function prediction only];
                     COG1413"
                     /db_xref="CDD:441023"
ORIGIN      
        1 mstkstadgc cktppvglrm trrngifaaa almiagtstl gcssmwrrdd ddsadaklek
       61 llkvpkapdl vreaavpkgl hsvrvdgval vnrlvatgga pepsilrdel veqmrrhdva
      121 npnhvlesse talvevrgvi ppgartgdpm dllvvapvqs hvrdlhggwl metrlrhqqm
      181 lrnslrksep lavgqgpllt radttpgtdd slrtkaivia ggrvienrdl glilrpefqh
      241 vkmaaaiaqa inrrffffdg terrgiaepl eddyikievh pryrrnqyrm mevaraigvk
      301 pesaetqqrl adlgqkladp etsadaalql egmgesaipt lvdaleqdnp elrfyvaeal
      361 ayldrdealp plesaiadsp afrfpgllai egmdgsaave tlrrlmdqps letrygafca
      421 irrrpdgasv lagqnvsgqf rlftvpcscq paivvslres peivmfgpde tidvthplfg
      481 pggllikqdp enpgqlrinr flpgeddrla ivpanltali hgiadvgggy gdvvtvlrea
      541 kdsgflqqql amdplpepmr tyhrdeaedq dsvaddessa evdg
//
LOCUS       WP_235951182             201 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF456 family protein [Crateriforma spongiae].
ACCESSION   WP_235951182
VERSION     WP_235951182.1
KEYWORDS    RefSeq.
SOURCE      Crateriforma spongiae
  ORGANISM  Crateriforma spongiae
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Planctomycetales; Planctomycetaceae; Crateriforma.
REFERENCE   1  (residues 1 to 201)
  AUTHORS   Kim,S., Jeon,T.J., Oberai,A., Yang,D., Schmidt,J.J. and Bowie,J.U.
  TITLE     Transmembrane glycine zippers: physiological and pathological roles
            in membrane proteins
  JOURNAL   Proc Natl Acad Sci U S A 102 (40), 14278-14283 (2005)
   PUBMED   16179394
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016213.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04306.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Crateriforma spongiae"
                     /db_xref="taxon:2724528"
     Protein         1..201
                     /product="DUF456 family protein"
                     /calculated_mol_wt=20029
ORIGIN      
        1 miselsllaa pdtawwqapw iaasgaavla igmviavals walnlialpg nwiavglmai
       61 yawlgpgdgr lgmgatpvvl afvlaaigeg leflagaaga rragasrrat vyalggsmlg
      121 aflgavvglp ipilgpvlaa llfggagatv gaiyaektdg rpwreswlig ksafwgrtlg
      181 tagkagvgal ivvvafiavl v
//
LOCUS       WP_235951190             617 aa            linear   BCT 02-MAR-2025
DEFINITION  redoxin domain-containing protein [Crateriforma spongiae].
ACCESSION   WP_235951190
VERSION     WP_235951190.1
KEYWORDS    RefSeq.
SOURCE      Crateriforma spongiae
  ORGANISM  Crateriforma spongiae
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Planctomycetales; Planctomycetaceae; Crateriforma.
REFERENCE   1  (residues 1 to 617)
  AUTHORS   Chae,H.Z., Robison,K., Poole,L.B., Church,G., Storz,G. and
            Rhee,S.G.
  TITLE     Cloning and sequencing of thiol-specific antioxidant from mammalian
            brain: alkyl hydroperoxide reductase and thiol-specific antioxidant
            define a large family of antioxidant enzymes
  JOURNAL   Proc Natl Acad Sci U S A 91 (15), 7017-7021 (1994)
   PUBMED   8041738
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012787.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00578.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Crateriforma spongiae"
                     /db_xref="taxon:2724528"
     Protein         1..617
                     /product="redoxin domain-containing protein"
                     /GO_function="GO:0016209 - antioxidant activity [Evidence
                     IEA]"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=67468
     Region          357..478
                     /region_name="CpoB"
                     /note="Cell division protein CpoB, coordinates
                     peptidoglycan biosynthesis and outer membrane constriction
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG1729"
                     /db_xref="CDD:441335"
     Region          483..616
                     /region_name="TrxA"
                     /note="Thiol-disulfide isomerase or thioredoxin
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG0526"
                     /db_xref="CDD:440292"
ORIGIN      
        1 maatlgwsat asaaptvaqa lglkpvqpnv dyqkvddatg ckledierdd wagwevvspe
       61 getlrrfadt ngdskvdlwc yyrygvevyr dvdsnfngka dqyrwmgteg irwglddned
      121 atvdrwkqis aeevsaelva airdadakrf galladqrdl traglgaaqa kelaekasla
      181 arrfarlads qktigkeanw vqftatapgv vpagtqdatr dfivyenava myesdgksgq
      241 lvigtmikvd dgwklvdlps mpaageaieq tagiffrpvv stgagavsgg vggaemqkmv
      301 taleaidrql aeeksaakla dlharradvv eqlianspsn adkqmwvrql vdtvgfavqs
      361 gaypkgldrl kqarkryags deslksyidf qvlsteyaak lqpgadsvdv qewyleqlta
      421 fvkahpraae saqamlqlal gkefedneke aldyyrqias rfkgtdaaqk aagairrlds
      481 vgkavdlsgk tvagqpfrla slrgkpvivq ywatwcepck edmkqlrrlk aqyrraglev
      541 vgisvdssrq qaesfikans mpwiqlfedg gldssplalq fgvqtlptmm lidkrgalvr
      601 hnvsrdelea elkklvr
//
LOCUS       WP_235951223             261 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar basal body L-ring protein FlgH [Crateriforma spongiae].
ACCESSION   WP_235951223
VERSION     WP_235951223.1
KEYWORDS    RefSeq.
SOURCE      Crateriforma spongiae
  ORGANISM  Crateriforma spongiae
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Planctomycetales; Planctomycetaceae; Crateriforma.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014195.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02107.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Crateriforma spongiae"
                     /db_xref="taxon:2724528"
     Protein         1..261
                     /product="flagellar basal body L-ring protein FlgH"
                     /GO_component="GO:0009427 - bacterial-type flagellum basal
                     body, distal rod, L ring [Evidence IEA]"
                     /GO_function="GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA]"
                     /GO_process="GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /calculated_mol_wt=28497
     Region          62..258
                     /region_name="FlgH"
                     /note="Flagellar basal body L-ring protein FlgH [Cell
                     motility]; COG2063"
                     /db_xref="CDD:441666"
ORIGIN      
        1 mntnapsiig hrglrilalv lsvllaapsm glaqstslfh gddvngssqg snsqvvgphg
       61 sdapvisapy gqtppphpgl aavswtytpp lprrvfqihd ivtirvdeia rvlaegsaes
      121 rkitqysavl sdwirltqgr lqpdeqpngd psvagntnnq yraesdvdts ealtfniaar
      181 ivdirpngnl vlearkkfrv ndnlwetals gicraqdvgp dnvvlsrdli dleidkqdqg
      241 qlrdgykrgw ftrwfdrlqp f
//
LOCUS       WP_235951302             271 aa            linear   BCT 02-MAR-2025
DEFINITION  TIM barrel protein [Crateriforma spongiae].
ACCESSION   WP_235951302
VERSION     WP_235951302.1
KEYWORDS    RefSeq.
SOURCE      Crateriforma spongiae
  ORGANISM  Crateriforma spongiae
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Planctomycetales; Planctomycetaceae; Crateriforma.
REFERENCE   1  (residues 1 to 271)
  AUTHORS   Fry,J., Wood,M. and Poole,P.S.
  TITLE     Investigation of myo-inositol catabolism in Rhizobium leguminosarum
            bv. viciae and its effect on nodulation competitiveness
  JOURNAL   Mol Plant Microbe Interact 14 (8), 1016-1025 (2001)
   PUBMED   11497462
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013429.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01261.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Crateriforma spongiae"
                     /db_xref="taxon:2724528"
     Protein         1..271
                     /product="TIM barrel protein"
                     /calculated_mol_wt=30319
     Region          24..270
                     /region_name="Hyi"
                     /note="Hydroxypyruvate/dehydroerythronate isomerase,
                     Hyi/OtnI family [Carbohydrate transport and metabolism];
                     cl46782"
                     /db_xref="CDD:481122"
ORIGIN      
        1 msppslsetn kvtdptfrqs imgwcfkpmd altlarhakr igysalegid rsaypevrkm
       61 gleislvssh gfrqgpvnpe nhamveaklv eaidvavqng apnvitftgm rekgiqdeta
      121 tanclrcwkr vlpyaeskgi tlvlehlnsv ddshpmkghp gyfgddvhrc vdmvrsmdsr
      181 nfrllfdiyh vqvmhgdlir hirlyhdfvg hyhtagnpgr geldetqein ypaviteirr
      241 tgfdgflaqe fiptaenpma slkhafqicq g
//
LOCUS       WP_235951350             211 aa            linear   BCT 02-MAR-2025
DEFINITION  protein phosphatase CheZ [Falsiroseomonas algicola].
ACCESSION   WP_235951350
VERSION     WP_235951350.1
KEYWORDS    RefSeq.
SOURCE      Falsiroseomonas algicola
  ORGANISM  Falsiroseomonas algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Falsiroseomonas.
REFERENCE   1  (residues 1 to 211)
  AUTHORS   Zhao,R., Collins,E.J., Bourret,R.B. and Silversmith,R.E.
  TITLE     Structure and catalytic mechanism of the E. coli chemotaxis
            phosphatase CheZ
  JOURNAL   Nat Struct Biol 9 (8), 570-575 (2002)
   PUBMED   12080332
  REMARK    Erratum:[Nat Struct Biol 2002 Sep;9(9):711]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016247.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04344.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Falsiroseomonas algicola"
                     /db_xref="taxon:2716930"
     Protein         1..211
                     /product="protein phosphatase CheZ"
                     /EC_number="3.6.1.-"
                     /GO_component="GO:0009288 - bacterial-type flagellum
                     [Evidence IEA]"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_process="GO:0050920 - regulation of chemotaxis
                     [Evidence IEA]"
                     /calculated_mol_wt=21337
     Region          16..211
                     /region_name="CheZ"
                     /note="Phosphoaspartate phosphatase CheZ, dephosphorylates
                     CheY;
                     P [Cell motility, Signal transduction mechanisms];
                     COG3143"
                     /db_xref="CDD:442377"
ORIGIN      
        1 mpdgiapvna gatpeearid aavravlgsm agdltateaa llaeleglgr tvarakeeia
       61 slrvddinis hipsatdeld aivghtaqat neildccevl egvagrvggg eaealsgait
      121 riyeacsfqd itgqrigkvv talkaiearv aqvterfsav asghalpaap apkpapaada
      181 etegrrlang pqlpgagvsq adidklladf d
//
LOCUS       WP_235951442            1205 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-L-fucosidase [Crateriforma spongiae].
ACCESSION   WP_235951442
VERSION     WP_235951442.1
KEYWORDS    RefSeq.
SOURCE      Crateriforma spongiae
  ORGANISM  Crateriforma spongiae
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Planctomycetales; Planctomycetaceae; Crateriforma.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013300.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01120.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Crateriforma spongiae"
                     /db_xref="taxon:2724528"
     Protein         1..1205
                     /product="alpha-L-fucosidase"
                     /GO_function="GO:0004560 - alpha-L-fucosidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=134432
     Region          31..456
                     /region_name="ARS_like"
                     /note="uncharacterized arylsulfatase subfamily; cd16143"
                     /db_xref="CDD:293762"
     Site            order(39..40,80..81,135,137,244,296..297)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293762"
     Site            order(39..40,81,135,137,244,297)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293762"
     Region          525..938
                     /region_name="Alpha_L_fucos"
                     /note="Alpha-L-fucosidase; smart00812"
                     /db_xref="CDD:214829"
ORIGIN      
        1 mtnksailav fvllgsygag ggicgeptar pnvvfifadd mgygevealn perskiptpa
       61 lnqlaaegkv ftdahtsssv cspsrysllt gryswrsrlq rgvltgggqp liaddrvtla
      121 slfrqegyqt aifgkwhley hyqvpedlkn vkpnqaesry aapvpigthi pdgpitrgfd
      181 tflgfhhsrs msslvrddri ieeidvveml prlteevvry idthaseses gkpfflylpl
      241 nsphspivpa aewegkggmg pysdfvaqtd gavaevlkal ernnlsddti vifstdngts
      301 riakipdlqa kghfpsadfr gskadlwdgg hrvpfivrwp gvikpestsd qlvcltdima
      361 tfaeyfsvsl addvaedsis flhamldrpg knartsvvhh siaghfsirq dgwklllapg
      421 sggwtapvga taikaglpem qlyhisedvg erqnvinqyp dkakelltll qsyvakgrst
      481 pgqpqsndve idvwkktnwq pkprkngkse lvvpvaaked vaakgqtrlp ydgsweslqe
      541 mpvpkwfddg kvgifihwgp yseigyrkgs rgyaehvpkl lyedpghyyp ymqerwgakp
      601 pqfgykdivp dfkaekwdpd qwaqlfqevg akyvvftaeh hdgwanwdsd ltpwnavkmg
      661 pkrdlvgdlg ealrqrglky apsyhrerht gffakekyvv hsqprediae eirrmpqaas
      721 lygpfsyska fvddyvarwk eiqekyhpdm lwvddfpiyt rdgnqvrsgr mkpeikyfdd
      781 qvrrmitdfm ndaaergqqv ycnnkggnpn wpagvgclek dnlklkvigp kwqscttfgs
      841 sfgylegdry rtiesvihel vevisrngnf linigpkgdg tlvpeqverl ramgqwlkin
      901 gdaiygsryw kvsdqederl vfttkgksly aikmeepsep ftilgtagwk sdevrsvrll
      961 gadarvswsm trqglrivpp ddpgisryaw afevvtlrnq hvpnviqnda dealkgtrrv
     1021 dleghdlsev qnlpgtsvei etanradgfq klvpktcdak ittnhitsnd pvdsltdgkl
     1081 eegfgpvfkn gvrngaykld lgavqsissi tswshnqrgf rghqrialfg sdastdpgwd
     1141 lrqyvplgki dttdqaigkf taaslrasde ttlgkfrwiv wavapittsg ggentafqel
     1201 svefe
//
LOCUS       WP_235951519             761 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase [Crateriforma spongiae].
ACCESSION   WP_235951519
VERSION     WP_235951519.1
KEYWORDS    RefSeq.
SOURCE      Crateriforma spongiae
  ORGANISM  Crateriforma spongiae
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Planctomycetales; Planctomycetaceae; Crateriforma.
REFERENCE   1  (residues 1 to 761)
  AUTHORS   de la Cruz,J., Kressler,D. and Linder,P.
  TITLE     Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and
            related families
  JOURNAL   Trends Biochem Sci 24 (5), 192-198 (1999)
   PUBMED   10322435
REFERENCE   2  (residues 1 to 761)
  AUTHORS   Aubourg,S., Kreis,M. and Lecharny,A.
  TITLE     The DEAD box RNA helicase family in Arabidopsis thaliana
  JOURNAL   Nucleic Acids Res 27 (2), 628-636 (1999)
   PUBMED   9862990
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012492.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00270.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Crateriforma spongiae"
                     /db_xref="taxon:2724528"
     Protein         1..761
                     /product="DEAD/DEAH box helicase"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=82173
     Region          <9..>148
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     Region          146..538
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     Region          623..695
                     /region_name="RRM_EcCsdA_like"
                     /note="RNA recognition motif (RRM) found in Escherichia
                     coli cold-shock DEAD box protein A (CsdA) and similar
                     proteins; cd12499"
                     /db_xref="CDD:409922"
     Site            order(630,635..638,640..642,644..645,651,654..657,
                     687..688,691)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409922"
ORIGIN      
        1 mtfvseispt sdadtsevqp apaadklete attvgesavv egvpadgaaa eqavsptgeq
       61 dssdqeasdq hpanqtsddq aigdptsgdr dqqdqvvnsg eaamseaatt adaesetesq
      121 psetaeavtp asqedpsvap esdqpsfanl glaeevlrav easgyqspte iqarvipela
      181 sgrdvlaqsq tgtgktaafa lpilshvdlh gdtpqalvlt ptrelaiqva rafstyagkt
      241 kkfrvaaiyg gqdyepqlkq lrrgahvvvg tpgrvidhvk rgsldlssvr clvldeadem
      301 lnmgfledve fvlqhspedq qialfsatvp pairniskhy lsdpvhitvr rkqvtaeqid
      361 qkaiivpprl kqevlrryle veptdgvivf tktkdatial aerlghggfr amalngdmpq
      421 kvrertvaql kdgqidilva tdvaargldv krishvvnfd lphdneayvh rigrtgragr
      481 dghaillvtp aqrgklrsie kttrqkieia qppsaeqlnq kridefkasv ketveskdle
      541 fftgliesla ndsdltpqti aaalafqsqr grsflakdlp tapeknrqas rerndrndsf
      601 gddssrrsgp prrlgpvrkg msryrievgr rdrvkpgniv gaianeggid gqfigpmlih
      661 dtftildlpe smphdvmetl qrtwvagkql glkvdtggpn rvgggdrsge dspgrprfkr
      721 gkfqrgrddd rgpagkrgph skrgagkrgp agkggyskkr r
//
LOCUS       WP_235951672             469 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase [Crateriforma spongiae].
ACCESSION   WP_235951672
VERSION     WP_235951672.1
KEYWORDS    RefSeq.
SOURCE      Crateriforma spongiae
  ORGANISM  Crateriforma spongiae
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Planctomycetales; Planctomycetaceae; Crateriforma.
REFERENCE   1  (residues 1 to 469)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Crateriforma spongiae"
                     /db_xref="taxon:2724528"
     Protein         1..469
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=52143
     Region          36..454
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
     Site            order(44,83,225,282..283)
                     /site_type="active"
                     /db_xref="CDD:293732"
     Site            order(44,83,225,283)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293732"
ORIGIN      
        1 mnannhtaig rcfviatmla aglafahpdt adaakpnvvm lladdlgyrd vgcydgpvqt
       61 pnidslaagg arftdfysgc avcspsratl mtgrhhirag vyswiqdeqq kshlllreit
      121 laevlksagy atahigkwhl glpsenhdkp tpdqhgfdhw fatwnnasps hhnpdnfirn
      181 gkpvgkldgy scqlvadeai gwmkqhvetn idqpffvnvw fhephapiaa pkdrttkygk
      241 pddkgaiysg tidntddaig rllrtidqlg iredtliiya sdngsyrtdr vgnlrgrkgv
      301 nweggirvpg ifhwpgriap qqvmtdpagl vdvlptvcgl lelekpsvhl dgsdlspllv
      361 nradafvrhq plfwhlqrss pivamrdgnf slvasrdyem pthnlfqeaw iprikeggyr
      421 dfelfdlsnd pgqttnvakq ypevfnrmkq rlleinasim kdatdwhlr
//
LOCUS       WP_235951695             363 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6655 family protein [Crateriforma spongiae].
ACCESSION   WP_235951695
VERSION     WP_235951695.1
KEYWORDS    RefSeq.
SOURCE      Crateriforma spongiae
  ORGANISM  Crateriforma spongiae
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Planctomycetales; Planctomycetaceae; Crateriforma.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042726.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20360.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Crateriforma spongiae"
                     /db_xref="taxon:2724528"
     Protein         1..363
                     /product="DUF6655 family protein"
                     /calculated_mol_wt=38623
     Region          29..>225
                     /region_name="DUF6655"
                     /note="Family of unknown function (DUF6655); pfam20360"
                     /db_xref="CDD:466509"
     Region          <266..341
                     /region_name="valS"
                     /note="valyl-tRNA synthetase; Provisional; PRK14900"
                     /db_xref="CDD:237855"
ORIGIN      
        1 mstfrrrrtc npdrrggrlg wwifgiltva tfgcgttrdy qateqlvlsd avdrsvstid
       61 frplsgqkvy ldtsylrsvk gadfvnadyv tsslrqqiva agclmqdsan eadliieari
      121 gtlgsddhrm tygvpennvl ssaaslvssa pavptlpeis varrearega akiaafaydr
      181 ktrkavwqsg irqssatard twvlgvgpfq sgtirddtkl agsklirfgr rhhkgagpem
      241 fdrppvdyta evrfddgwpa ldpnhsgvem iagdaskaep ieaaekeamv kmvsakspse
      301 ktpaektana ksgkssggat snapaksakk agpgdqpkpp sgaseptvrp rrgqviqagp
      361 tgg
//
LOCUS       WP_235951849             476 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase [Crateriforma spongiae].
ACCESSION   WP_235951849
VERSION     WP_235951849.1
KEYWORDS    RefSeq.
SOURCE      Crateriforma spongiae
  ORGANISM  Crateriforma spongiae
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Planctomycetales; Planctomycetaceae; Crateriforma.
REFERENCE   1  (residues 1 to 476)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Crateriforma spongiae"
                     /db_xref="taxon:2724528"
     Protein         1..476
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=53486
     Region          45..457
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
     Site            order(53,93,245,305..306)
                     /site_type="active"
                     /db_xref="CDD:293732"
     Site            order(53,93,245,306)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293732"
ORIGIN      
        1 msqnrirsri vcivlgiamq vildgptpst aadkttdidp tsdrpnlifv laddlgygdl
       61 gcygrkdirt prldqmaadg vrftahyang aecsptraaf ltgryqqwig glecaigtgn
      121 vgryddairl rethdlglpv svptlpaqlk sagyetaifg kwhlgyepkf aphlhgfdht
      181 yyciggemdy fhytdnvagy nlfrdgkpir degyftdlit deavkfingk herpyflylp
      241 ytcphspfqg pddrrthplp ldsplwkqgs appdvyrami qrmdqqigrv ldtvnantlv
      301 ifasdnggtk sarndpyrgi kgstfeggir vpaiaywpgk iaagtvcdvp tltfdwtrtl
      361 adlanasfpg phrlegvnvl dildgehpdr vlywrkprge siwkgvrdgd wkyvvdrrge
      421 rekvylfnla vdeseshnli eqypdtakrl ramydswest trrdrrgrpq wtspsd
//
LOCUS       WP_235951860             438 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Crateriforma spongiae].
ACCESSION   WP_235951860
VERSION     WP_235951860.1
KEYWORDS    RefSeq.
SOURCE      Crateriforma spongiae
  ORGANISM  Crateriforma spongiae
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Planctomycetales; Planctomycetaceae; Crateriforma.
REFERENCE   1  (residues 1 to 438)
  AUTHORS   Mande,S.S., Sarfaty,S., Allen,M.D., Perham,R.N. and Hol,W.G.
  TITLE     Protein-protein interactions in the pyruvate dehydrogenase
            multienzyme complex: dihydrolipoamide dehydrogenase complexed with
            the binding domain of dihydrolipoamide acetyltransferase
  JOURNAL   Structure 4 (3), 277-286 (1996)
   PUBMED   8805537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07992.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Crateriforma spongiae"
                     /db_xref="taxon:2724528"
     Protein         1..438
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=47099
     Region          8..414
                     /region_name="CzcO"
                     /note="Predicted flavoprotein CzcO associated with the
                     cation diffusion facilitator CzcD [Inorganic ion transport
                     and metabolism]; COG2072"
                     /db_xref="CDD:441675"
ORIGIN      
        1 mskplcnvnq slpivvigag pvglaaaanl vqyqqdflvl eagprvaasm sgwrhvrlft
       61 pwsyliapag rrllerqgdw sepdadrvpf agelidgyld plskvpdiaa kiklnhkvis
      121 vsreghdlmk dgrrdeapfl ivvdspdgpk rfraravvda sgtwtnpnpl gsggipadge
      181 qqaqdriqyg mpdilggdrd ryagkrvlvv gsghsatgnv lhllkladdf patqiawgir
      241 rrnpaklwgg gsddeiaarg qlgtlakeav dqgnvtlltg lsvvalhrre sgleiidvdg
      301 rsrievdeii vasgarpdla mlrelrlefd pateatktlg plidpnhhhc gsvpphgaae
      361 lrhpesgfyl agmksygrap tfllvtgyeq vrsivaelsg dreaarnvel vlpatgvcsl
      421 dlceqeddcg paescrqr
//
LOCUS       WP_235951978            1029 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase [Crateriforma spongiae].
ACCESSION   WP_235951978
VERSION     WP_235951978.1
KEYWORDS    RefSeq.
SOURCE      Crateriforma spongiae
  ORGANISM  Crateriforma spongiae
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Planctomycetales; Planctomycetaceae; Crateriforma.
REFERENCE   1  (residues 1 to 1029)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Crateriforma spongiae"
                     /db_xref="taxon:2724528"
     Protein         1..1029
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=113022
     Region          72..407
                     /region_name="PQQ"
                     /note="Outer membrane protein assembly factor BamB,
                     contains PQQ-like beta-propeller repeat [Cell
                     wall/membrane/envelope biogenesis]; COG1520"
                     /db_xref="CDD:441129"
     Region          463..918
                     /region_name="iduronate-2-sulfatase"
                     /note="cd16030"
                     /db_xref="CDD:293754"
     Site            order(472..473,511,562,564,661,766..767)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293754"
     Site            order(472..473,511,562,564,661,767)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293754"
ORIGIN      
        1 mvrskslvll tllfsvpvga esgttdwpsf rgvgaqgvan gyetpvqwda tdpddpsvlw
       61 ksavpglghs cpvivgdrlf iatavatdgd vplqigragn tnaaddnseq kwmllcfdkn
      121 tgkelwqkkv yqgvpkatrh akathanttv avsgdnvvaf fgseglycyd lngelkwkkd
      181 lgvvdvskyg igwgyasspa ihdghivlvc ddpdhphiia vdlkdgepiw rrdrdevcer
      241 swgtplihev dgraqvvvng fpwivaydlq tgdevwrieg ggdnpiptpf vandriyits
      301 ahggpspvia vrtdakgnlt dtvspqdagl vwrvekggsy mstpvvvgdy lylghsngvl
      361 rcfhantgek lyekrldsga yvvsslvaan dkvyctsedg tvyviaagpe ykllaknplg
      421 dsclatpais agtiyfrtas slmaigpend vavsdvglea rrkpnvlfia vddlrptlgc
      481 ygdahaispn idglaesgmr fnraycqvav cnpsraslmt glrpdtlgvw tlpihfreak
      541 pdavtlpqwl rrfgytavgh gkifhnptpd pqswsepirs lpslpyvypd gtrdvvrqam
      601 eklpandwrk nnlralatsa pdlpdselld gartdrcied lrrlakskqp fflamgyirp
      661 hlafvapkky wdmydpdklp vlagqatpeg appyamhnns elshyvdlid mpkpwdtdel
      721 aadkarrlvh gyhacvsyid aqigrllkal ddeglrenti vvlwsdhgwk lgeyrgwgkm
      781 tnyeidarvp liisapglnn dgqcteslve lldlfptlcd lagveipgfv egksvvpilr
      841 dpdatvhssv lsqyyrryed teymgysmrt dryryiewrd fatgelkdqe lydhqaagdq
      901 ggfqpnlgtp etkniaeevd psllaklsqq lqsqhpprkl sltpavhtsp sgpgrlqvef
      961 tfenrtdgdi flqaikptgr ravkrtlapg dsvtlnarig gvyvvesrdg siheihspcw
     1021 pprtvvirk
//
LOCUS       WP_235952083             487 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-binding domain-containing protein [Falsiroseomonas
            algicola].
ACCESSION   WP_235952083
VERSION     WP_235952083.1
KEYWORDS    RefSeq.
SOURCE      Falsiroseomonas algicola
  ORGANISM  Falsiroseomonas algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Falsiroseomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025114.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13738.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Falsiroseomonas algicola"
                     /db_xref="taxon:2716930"
     Protein         1..487
                     /product="NAD(P)-binding domain-containing protein"
                     /calculated_mol_wt=52604
     Region          58..385
                     /region_name="CzcO"
                     /note="Predicted flavoprotein CzcO associated with the
                     cation diffusion facilitator CzcD [Inorganic ion transport
                     and metabolism]; COG2072"
                     /db_xref="CDD:441675"
ORIGIN      
        1 mdalplhplm plpdaearla aladrvawel qtlaypardw vrprgdgvrd vvvvgggqcg
       61 lalsfalrra rvtntevlea gapagiwlrf armhtlrtpk hvtgpelgmp slsvrawfea
      121 rygeaawaal tkiprdvwqa yldwlqgmla lpveagwrvd avapeaddll avtaerddga
      181 rarwlarhvv latgvdgaga wqvpamvaaa lpagryahta eaidfarlag krvavlgaga
      241 safdnaamal ehgaarvdll arrpqlpavn pyrwmefagf lnhfadlpda lkwrfmrtif
      301 amnqpppqet fsrcalhagf hlhlgapira lrmegdaivv etphravpad flivgtglvv
      361 epalrpelaa aaphlarwrd rfappageed aalgafpylt gdfafterva gsapwlarlr
      421 sssfaamast assggistlr ptvdriargi trdlfldqae adhaalvaye erelvdltla
      481 segtrpw
//
LOCUS       WP_235951847            1034 aa            linear   BCT 02-MAR-2025
DEFINITION  GH116 family glycosyl hydrolase [Crateriforma spongiae].
ACCESSION   WP_235951847
VERSION     WP_235951847.1
KEYWORDS    RefSeq.
SOURCE      Crateriforma spongiae
  ORGANISM  Crateriforma spongiae
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Planctomycetales; Planctomycetaceae; Crateriforma.
REFERENCE   1  (residues 1 to 1034)
  AUTHORS   Hammer,M.B., Eleuch-Fayache,G., Schottlaender,L.V., Nehdi,H.,
            Gibbs,J.R., Arepalli,S.K., Chong,S.B., Hernandez,D.G., Sailer,A.,
            Liu,G., Mistry,P.K., Cai,H., Shrader,G., Sassi,C., Bouhlal,Y.,
            Houlden,H., Hentati,F., Amouri,R. and Singleton,A.B.
  TITLE     Mutations in GBA2 cause autosomal-recessive cerebellar ataxia with
            spasticity
  JOURNAL   Am J Hum Genet 92 (2), 245-251 (2013)
   PUBMED   23332917
REFERENCE   2  (residues 1 to 1034)
  AUTHORS   Cobucci-Ponzano,B., Aurilia,V., Riccio,G., Henrissat,B.,
            Coutinho,P.M., Strazzulli,A., Padula,A., Corsaro,M.M., Pieretti,G.,
            Pocsfalvi,G., Fiume,I., Cannio,R., Rossi,M. and Moracci,M.
  TITLE     A new archaeal beta-glycosidase from Sulfolobus solfataricus:
            seeding a novel retaining beta-glycan-specific glycoside hydrolase
            family along with the human non-lysosomal glucosylceramidase GBA2
  JOURNAL   J Biol Chem 285 (27), 20691-20703 (2010)
   PUBMED   20427274
REFERENCE   3  (residues 1 to 1034)
  AUTHORS   Boot,R.G., Verhoek,M., Donker-Koopman,W., Strijland,A., van
            Marle,J., Overkleeft,H.S., Wennekes,T. and Aerts,J.M.
  TITLE     Identification of the non-lysosomal glucosylceramidase as
            beta-glucosidase 2
  JOURNAL   J Biol Chem 282 (2), 1305-1312 (2007)
   PUBMED   17105727
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016563.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04685.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1034
                     /organism="Crateriforma spongiae"
                     /db_xref="taxon:2724528"
     Protein         1..1034
                     /product="GH116 family glycosyl hydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /calculated_mol_wt=114948
     Region          51..918
                     /region_name="COG4354"
                     /note="Uncharacterized conserved protein, contains GBA2_N
                     and DUF608 domains [Function unknown]"
                     /db_xref="CDD:443491"
ORIGIN      
        1 mnaalllsgr skvmagpfdg ndfdpiipad kklskewias lydrgnplsa sgenlrfigm
       61 pingictgqv ylggdgrlwy wnldghrdrk qigagprfte pdtfqspmdq gfaievrsdn
      121 sattftldsn gfedvvftnr ypmanvtyad nacpikveld aytpyiplnr ddssfpvivm
      181 ryslsnlsgt dqevsiagwi enlsnfrsgk grqgrrfsrf terdglsave cwagsisddg
      241 aeeqadvfad feggdygdwk vegdafgdrp atgprtiqkl sgfdgkglvn swtgsdkpqg
      301 kltspnftiq kpfinfligg gnntkslgmh lwvdgqkvrs asgnrsdamt waswdveewa
      361 gktahleivd aasggwghid idqivfstkp asgnsetple ratdfgsial gllgnepaef
      421 vdiqrsatgs ndlftrtnsk vsdgdtfqrp lrerafaslg rttklapgeh avvtftvswr
      481 fpnaryvtkf grspgepdin eystrwptpv dsaasvavrq aeltdtsqtw tdtwydstlp
      541 ywflertlip lncmqtqvae rlalqdgmyn ldegvnccpg ncthvwqyaq glarifpvie
      601 recrekveyg kgfrasdgai nfrhsigefr daidgqcgti lrvlresqmt tddrflesiw
      661 drtrqsmehv irkwdkdetg llagaqhntl depwfgqvhw linlyhaslk asavmarqmn
      721 qpavadryer ivakgapamv dmlwnedfgy fvhnpgpged ekhgsvngch idqvlgefwl
      781 rnvgldpvlp qdktrrales lwtynfspnv gdyrkvmtag rwyavegnag limcsfpygk
      841 ieaksgkkny agylnecmtg fewqvaahmi wegmlekgla igkaiydryq pqdrnpynei
      901 ecsdhyaram ssysafmavc gyqydgpsgr lafgpkmqhe dfraafttae gwgqftqtvk
      961 dvrqensiel rygklqlqql tldlapgtks gqatatldgr tipavfktdg nrlvatfpgg
     1021 lnidngqtlr vkha
//
LOCUS       WP_235952242            1757 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1549 domain-containing protein [Crateriforma spongiae].
ACCESSION   WP_235952242
VERSION     WP_235952242.1
KEYWORDS    RefSeq.
SOURCE      Crateriforma spongiae
  ORGANISM  Crateriforma spongiae
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Planctomycetales; Planctomycetaceae; Crateriforma.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019219.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07583.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1757
                     /organism="Crateriforma spongiae"
                     /db_xref="taxon:2724528"
     Protein         1..1757
                     /product="DUF1549 domain-containing protein"
                     /calculated_mol_wt=191968
     Region          70..>117
                     /region_name="PSCyt1"
                     /note="Planctomycete cytochrome C; pfam07635"
                     /db_xref="CDD:429568"
     Region          <175..507
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          175..211
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          217..257
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          262..297
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          305..340
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          402..429
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          861..1045
                     /region_name="PSCyt2"
                     /note="Protein of unknown function (DUF1549); pfam07583"
                     /db_xref="CDD:429550"
     Region          1123..1353
                     /region_name="PSD1"
                     /note="Protein of unknown function (DUF1553); pfam07587"
                     /db_xref="CDD:429553"
     Region          <1331..1431
                     /region_name="CFAP91"
                     /note="Cilia- and flagella-associated protein 91;
                     pfam14738"
                     /db_xref="CDD:464290"
ORIGIN      
        1 mnfkatrmaa lpsvvttgsv rpgvllpftl lgcllafgpi atlwaessra ddpapvsyhr
       61 dvlpifrqnc fgchqaakdq gdyrmtdfas lvaggesgqp aivpgkpdes ylveqitpid
      121 gvaampaapm kaldddeval vrrwiaegaa ddspadsgpr ysadsppgya gpptiasidv
      181 spdgsliaia gfhevlvrqt sggdvvarli gdspriesvr fspdgnsiav aggrpgedge
      241 iqiwdvqsrs lrlsvhftad tlsgaswspd skrlafggnd nviraidaet gqqvlfqgah
      301 edwirdtgft adgshlvsva rdmsckltev aterfvdnit sitpgalsgg lngvavhpqr
      361 sevvvggadg vakvyrvfre ttrrigddan lirrlpalkg rifsvaidpa gariaaaatl
      421 dgksqvaiwd ydfdgtlsdq lkqilgkrvs drsaedkqkv eqyrgrattt vldqiidqvv
      481 yairfapdgs lwvaagdnsl rrydasgqvq rfdalplgea qederirfda tqwvrnedds
      541 asdaeplsld dpgvierltv qptairftsp lqyaqlvvtg haadgstydv trharyesqr
      601 nilvgtrtal lrpvttgqdt ltirfgkata tidvsvedmt pemspefdgg atpdfirdvn
      661 pvlsrlgcnq gtchgaqagk ngfklslrgy dpifdiralt ddlaarridp ahpseslmlr
      721 kplgltpheg gvlmqpgdps hvilrrwiha gspldmttpr vksievfpkd pvvqstqgrq
      781 qvrvvatyad gmqrdvtrea fiesgnteva tvvsgailsa vrrgeapila ryegayaatt
      841 ltvmgdrsqy qavdtpyynr idelvaakwr rmkivpsela ddltflrrvh ldltglppta
      901 ddlrrfeadp rpsqlkraev idqligneaf veywtnkwad llqvnrkflg vegstafrdw
      961 irqsvvdnkp ydefareilt asgsnkdnpp asyykilrtp edtmentthl flgirfncnk
     1021 chdhpferwt qdqyyqmaaf farvdlkrdp ndggkkiggt avdgakplye iisdrsegem
     1081 thartgetva pafpfdlpkd drktlvsrqe skatdakslp dtrrgdlarw mtdpanpyfa
     1141 rsyvnrvway lmgvgliepi ddiragnppt npelldhltd vfvksgfdvr qlmrtivssr
     1201 tyqlsvatha mnqddqlnys hatarrlpae vifdavhsvt gatssipgva pgtraaalgd
     1261 agvklddgfl qnlgrpares acecerssgl elgpvmalis gptignaits dkndleslva
     1321 gtadngdlvd eiflralarh atddevaafn dlvdqvvadh qlmksrlaes eadwkvrrae
     1381 lesirnerla eikaaiakre seykpvlakl qterqqriaa akerlakves elaakidawv
     1441 dgyngqaakk dpskirnewy plaavatkaa ketkllpqad rsilatgnad kqtyevtyqt
     1501 siagitgfrl eaiaaddlpn kgpgrgdngn fvvteievfa stgdqkptkv gilkaqadft
     1561 qngfdikraf dqatrnqsgw avaggtsrth watfqfakpi ngdaatsgst kltfkihqyh
     1621 naakhrlgrf risvttdadv rlglpeslda ivrtaktdrs eaqqeqlaqh vrlqdkawte
     1681 anaavvqank aippdaeltr laaqqkrlet ptpddsrlvr lrrdvvqsqk qssrprltaa
     1741 edlvwalvns paflfnr
//
LOCUS       WP_235952339             778 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase [Crateriforma spongiae].
ACCESSION   WP_235952339
VERSION     WP_235952339.1
KEYWORDS    RefSeq.
SOURCE      Crateriforma spongiae
  ORGANISM  Crateriforma spongiae
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Planctomycetales; Planctomycetaceae; Crateriforma.
REFERENCE   1  (residues 1 to 778)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Crateriforma spongiae"
                     /db_xref="taxon:2724528"
     Protein         1..778
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=88050
     Region          29..481
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
     Site            order(37,91,283,369..370)
                     /site_type="active"
                     /db_xref="CDD:293732"
     Site            order(37,91,283,370)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293732"
     Region          <704..769
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cl22861"
                     /db_xref="CDD:473984"
ORIGIN      
        1 mraflmiacv mclsatqvna eqqepksqpn iiivfaddis arefpiygss vwtkekgvdt
       61 sdrafraetp vlnqmaqegc wiktawasvv cspsrammmt gryahlhkww qnsykgryid
      121 engkettwpl ymssplqigh vaqqagygty wagktqmagd lreygfdqgc ftpgnlsdkd
      181 npytdfklvq rvangerlif nadtgkpidt ylqhgwyfyp hvwlmnhgdq dfqwwpntde
      241 skeafglgty gpdveldfif dfmdrqhskg rpffvyhtth lghgafdwln ptngqcwpgt
      301 pvvqwdgnky triephitgd dgvydthgtv tetgiqsqie yldyqmwlyr nrlremgiad
      361 ntviifcadn gtsgygkgsh drqkgvhvpl iifapgmtkh gqqdvlvnms dllptiadlt
      421 gatipkdyvh ngeslvpflf tnkskhrqwi ygysrerqii rgdfvmrdgy gkwwdvaeep
      481 adlisydqit nwddvsqqhr derdklkivl pkfdlfdiep dapgvrrsgt ignptasssg
      541 kksatnktlg tkkasagast vgsqqwkpvf eddfdnrtki gkdyttargh edswsvingv
      601 lvgkqtkadh gavirtqldf ddidiqfdfr fsggksfnfv iddqneksvh aghicrasvf
      661 pkflkigddk tggmnlevrk qrqdknlstr daealkrlle rtgasakisi hpgqwhtlri
      721 rirgdimkaf lddelvtslr spgfdhptkt kfgftvngqs idfdnlvvkr lvtmdgre
//
LOCUS       WP_235952433             398 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Falsiroseomonas algicola].
ACCESSION   WP_235952433
VERSION     WP_235952433.1
KEYWORDS    RefSeq.
SOURCE      Falsiroseomonas algicola
  ORGANISM  Falsiroseomonas algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Falsiroseomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024806.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13414.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Falsiroseomonas algicola"
                     /db_xref="taxon:2716930"
     Protein         1..398
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=41498
     Region          2..>156
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          6..34
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(7,10..11,14..15,17,41,44..45,48..49,51..52,75,
                     78..79,82..83,86)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          39..69
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          108..134
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          197..398
                     /region_name="COG4976"
                     /note="Predicted methyltransferase, contains TPR repeat
                     [General function prediction only]"
                     /db_xref="CDD:444001"
ORIGIN      
        1 maqasaddll regaarharg eiamaerlyr rvlklrpqda nalnllgvaa rqrgdiatal
       61 slsaeavarn pgspvflanr ggtlaeagrl eeaaqalraa lairpadpma lrnlgqvlca
      121 lgdaaaaiep lrrattlapa tpepwialah alrevgqdga aeaarralai pgldpsladq
      181 arfllaalga eaapdrapaa yvrdlfdlya prfdedlqgr lgyrtpalla alvaragfat
      241 grvldlgcgt glsglplkpm atrlegldls prmlaeaakr giydalhead llawlptrrg
      301 gfdlvaaadv lnylgdlapa ltaiaaalrp gglaafsiek gadapyalgn glryrhdpah
      361 vealaraggl tllareetal reekgvpvag vlfvlrrv
//
LOCUS       WP_235952468             134 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Falsiroseomonas algicola].
ACCESSION   WP_235952468
VERSION     WP_235952468.1
KEYWORDS    RefSeq.
SOURCE      Falsiroseomonas algicola
  ORGANISM  Falsiroseomonas algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Falsiroseomonas.
REFERENCE   1  (residues 1 to 134)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 134)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Falsiroseomonas algicola"
                     /db_xref="taxon:2716930"
     Protein         1..134
                     /product="VOC family protein"
                     /calculated_mol_wt=13898
     Region          7..129
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mvpdgtlcpc lryrdapaal dwlerafgfr rglvvpdgag giahaelhlg gtglvmlgsv
       61 radgfgrdpa alggvsgsiy vrcgdadaah dravaagavi vrplettdyg srdfsvrdpe
      121 ghvwafgsyw pegs
//
LOCUS       WP_235952569             124 aa            linear   BCT 02-MAR-2025
DEFINITION  integrase core domain-containing protein, partial [Falsiroseomonas
            algicola].
ACCESSION   WP_235952569
VERSION     WP_235952569.1
KEYWORDS    RefSeq.
SOURCE      Falsiroseomonas algicola
  ORGANISM  Falsiroseomonas algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Falsiroseomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025063.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13683.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Falsiroseomonas algicola"
                     /db_xref="taxon:2716930"
     Protein         <1..124
                     /product="integrase core domain-containing protein"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <26..106
                     /region_name="DDE_3"
                     /note="DDE superfamily endonuclease; cl46863"
                     /db_xref="CDD:481203"
ORIGIN      
        1 rrlprrstrp cgpfrmvlrr pvetkqyvsi ryterlaeag iepsvgsvgd sydnalaesv
       61 iglfktevir rrgpwrgieg vefatlewvd wfnnrrllep ignippaeae aryyaaqeai
      121 plaa
//
LOCUS       WP_235952810             195 aa            linear   BCT 02-MAR-2025
DEFINITION  PIN domain-containing protein [Alterinioella nitratireducens].
ACCESSION   WP_235952810
VERSION     WP_235952810.1
KEYWORDS    RefSeq.
SOURCE      Alterinioella nitratireducens
  ORGANISM  Alterinioella nitratireducens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Alterinioella.
REFERENCE   1  (residues 1 to 195)
  AUTHORS   Matelska,D., Steczkiewicz,K. and Ginalski,K.
  TITLE     Comprehensive classification of the PIN domain-like superfamily
  JOURNAL   Nucleic Acids Res 45 (12), 6995-7020 (2017)
   PUBMED   28575517
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036878.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18475.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Alterinioella nitratireducens"
                     /db_xref="taxon:2735915"
     Protein         1..195
                     /product="PIN domain-containing protein"
                     /calculated_mol_wt=21581
     Region          2..100
                     /region_name="PIN7"
                     /note="PIN domain; pfam18475"
                     /db_xref="CDD:436528"
ORIGIN      
        1 midfenvqpk nlgllrghpf tlvvfvgasq knvpfdfana lqdlgenasy rkitgngsna
       61 ldfhiafylg qlaakddngy fhiisrdkgf dplishlrer kiyalrhvdi seipfvkisn
      121 assldqkvea ivdslrsrgt srprkvktlk gtmnglfmkt ldesdqdalv delkkrghvv
      181 vedqsvsygp ailgh
//
LOCUS       WP_235952812              96 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6127 family protein [Alterinioella nitratireducens].
ACCESSION   WP_235952812
VERSION     WP_235952812.1
KEYWORDS    RefSeq.
SOURCE      Alterinioella nitratireducens
  ORGANISM  Alterinioella nitratireducens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Alterinioella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040331.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19622.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Alterinioella nitratireducens"
                     /db_xref="taxon:2735915"
     Protein         1..96
                     /product="DUF6127 family protein"
                     /calculated_mol_wt=10265
     Region          13..77
                     /region_name="DUF6127"
                     /note="Family of unknown function (DUF6127); pfam19622"
                     /db_xref="CDD:466131"
ORIGIN      
        1 milprtekge lrmseaefrt flsqaaeega kraladagid gkdaaldird lrslldcirf
       61 vrrtavqtav hlittgimla llagialklk ifggsp
//
LOCUS       WP_235952837             207 aa            linear   BCT 02-MAR-2025
DEFINITION  CIA30 family protein [Alterinioella nitratireducens].
ACCESSION   WP_235952837
VERSION     WP_235952837.1
KEYWORDS    RefSeq.
SOURCE      Alterinioella nitratireducens
  ORGANISM  Alterinioella nitratireducens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Alterinioella.
REFERENCE   1  (residues 1 to 207)
  AUTHORS   Janssen,R., Smeitink,J., Smeets,R. and van Den Heuvel,L.
  TITLE     CIA30 complex I assembly factor: a candidate for human complex I
            deficiency?
  JOURNAL   Hum Genet 110 (3), 264-270 (2002)
   PUBMED   11935339
REFERENCE   2  (residues 1 to 207)
  AUTHORS   Walker,J.E., Arizmendi,J.M., Dupuis,A., Fearnley,I.M., Finel,M.,
            Medd,S.M., Pilkington,S.J., Runswick,M.J. and Skehel,J.M.
  TITLE     Sequences of 20 subunits of NADH:ubiquinone oxidoreductase from
            bovine heart mitochondria. Application of a novel strategy for
            sequencing proteins using the polymerase chain reaction
  JOURNAL   J Mol Biol 226 (4), 1051-1072 (1992)
   PUBMED   1518044
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020136.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08547.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Alterinioella nitratireducens"
                     /db_xref="taxon:2735915"
     Protein         1..207
                     /product="CIA30 family protein"
                     /calculated_mol_wt=23120
     Region          51..193
                     /region_name="CIA30"
                     /note="Complex I intermediate-associated protein 30
                     (CIA30); cl21728"
                     /db_xref="CDD:473944"
ORIGIN      
        1 mkrdwlpfag ialwtgvlrs ereavevlim idapeiiddl rhtspmavtg ngwalisdrv
       61 mggvsagtmr revvegrkai rmlggvslen nggflqvald lgdagsevda rnwtgikldv
      121 fgndqvynlh lrtsdihrpw esyrqsfcap srwttiylpf sefvphrter plntarlrri
      181 glvaigrefe adisiadirf yatsedc
//
LOCUS       WP_235952868             188 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3859 domain-containing protein [Salipiger sp. PrR002].
ACCESSION   WP_235952868
VERSION     WP_235952868.1
KEYWORDS    RefSeq.
SOURCE      Salipiger sp. PrR002
  ORGANISM  Salipiger sp. PrR002
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024377.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12975.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Salipiger sp. PrR002"
                     /db_xref="taxon:2706489"
     Protein         1..188
                     /product="DUF3859 domain-containing protein"
                     /calculated_mol_wt=19422
     Region          <78..168
                     /region_name="DUF3859"
                     /note="Domain of unknown function (DUF3859); pfam12975"
                     /db_xref="CDD:432912"
ORIGIN      
        1 mrhlalllml agpafagagp sfagssetag qsfsaapmql lergvicqit aegarpapet
       61 eqgvinlvep grridvatev vpaalgisfg irfmladdap pmalrvvvth ppmgsraier
      121 eswvtnavpg apglslftfe ypyemvegaw tmaleagger lleqhfsvvp aeaaapvlaa
      181 cagpapms
//
LOCUS       WP_235952864             392 aa            linear   BCT 02-MAR-2025
DEFINITION  polysaccharide biosynthesis/export family protein
            [Noviherbaspirillum galbum].
ACCESSION   WP_235952864
VERSION     WP_235952864.1
KEYWORDS    RefSeq.
SOURCE      Noviherbaspirillum galbum
  ORGANISM  Noviherbaspirillum galbum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Noviherbaspirillum.
REFERENCE   1  (residues 1 to 392)
  AUTHORS   Stevenson,G., Andrianopoulos,K., Hobbs,M. and Reeves,P.R.
  TITLE     Organization of the Escherichia coli K-12 gene cluster responsible
            for production of the extracellular polysaccharide colanic acid
  JOURNAL   J Bacteriol 178 (16), 4885-4893 (1996)
   PUBMED   8759852
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014606.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02563.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Noviherbaspirillum galbum"
                     /db_xref="taxon:2709383"
     Protein         1..392
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0015774 - polysaccharide transport
                     [Evidence IEA]"
                     /calculated_mol_wt=41168
     Region          61..392
                     /region_name="PRK15078"
                     /note="polysaccharide export protein Wza; Provisional"
                     /db_xref="CDD:237903"
ORIGIN      
        1 mrftskatla twsvvlvlpw lagcqsavpg mhfdrssfns sgssaassas ggenmnaelk
       61 pitpqlvkal qetrekqatq dissliskps sykidagdvl svvvwdhpel snsatvpvgg
      121 yggqgadast saatappagf mvdhdgtiqf pyagsikvag msqdqasqvl gqklskylrn
      181 pkvtlrvqsy rskrvyvdge vktpglqain dipmtlveai nraggvlptg dqsqvvvnrs
      241 gvnyqinlpq lvqrgvnpas imlkdgdvvr vrsrdeskvf vsgevvspra lpmhngrltl
      301 nealgesggv nplsgdgsqi yvirrdggnq vvyqldgska gaiamaenfe lspkdvvfva
      361 atplanwhrs islilpsals gavgavtpat qr
//
LOCUS       WP_235952909             131 aa            linear   BCT 02-MAR-2025
DEFINITION  biopolymer transporter ExbD [Salipiger sp. PrR002].
ACCESSION   WP_235952909
VERSION     WP_235952909.1
KEYWORDS    RefSeq.
SOURCE      Salipiger sp. PrR002
  ORGANISM  Salipiger sp. PrR002
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 131)
  AUTHORS   Wiggerich,H.G., Klauke,B., Koplin,R., Priefer,U.B. and Puhler,A.
  TITLE     Unusual structure of the tonB-exb DNA region of Xanthomonas
            campestris pv. campestris: tonB, exbB, and exbD1 are essential for
            ferric iron uptake, but exbD2 is not
  JOURNAL   J Bacteriol 179 (22), 7103-7110 (1997)
   PUBMED   9371459
REFERENCE   2  (residues 1 to 131)
  AUTHORS   Sun,T.P. and Webster,R.E.
  TITLE     Nucleotide sequence of a gene cluster involved in entry of E
            colicins and single-stranded DNA of infecting filamentous
            bacteriophages into Escherichia coli
  JOURNAL   J Bacteriol 169 (6), 2667-2674 (1987)
   PUBMED   3294803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014525.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02472.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Salipiger sp. PrR002"
                     /db_xref="taxon:2706489"
     Protein         1..131
                     /product="biopolymer transporter ExbD"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=14206
ORIGIN      
        1 mrkmrrrrkl smtslidvif llllffmlts tftrfaevel aaagsgaavs getkplflql
       61 gaedlrlngt vltledlpak ldetrgdiae daepkpliva lrgevnsqrl tdllvvlrgv
      121 sgyramvlga s
//
LOCUS       WP_235952986             110 aa            linear   BCT 02-MAR-2025
DEFINITION  FliM/FliN family flagellar motor switch protein [Salipiger sp.
            PrR002].
ACCESSION   WP_235952986
VERSION     WP_235952986.1
KEYWORDS    RefSeq.
SOURCE      Salipiger sp. PrR002
  ORGANISM  Salipiger sp. PrR002
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 110)
  AUTHORS   Paul,K. and Blair,D.F.
  TITLE     Organization of FliN subunits in the flagellar motor of Escherichia
            coli
  JOURNAL   J Bacteriol 188 (7), 2502-2511 (2006)
   PUBMED   16547037
REFERENCE   2  (residues 1 to 110)
  AUTHORS   Brown,P.N., Mathews,M.A., Joss,L.A., Hill,C.P. and Blair,D.F.
  TITLE     Crystal structure of the flagellar rotor protein FliN from
            Thermotoga maritima
  JOURNAL   J Bacteriol 187 (8), 2890-2902 (2005)
   PUBMED   15805535
REFERENCE   3  (residues 1 to 110)
  AUTHORS   Chen,L.M., Kaniga,K. and Galan,J.E.
  TITLE     Salmonella spp. are cytotoxic for cultured macrophages
  JOURNAL   Mol Microbiol 21 (5), 1101-1115 (1996)
   PUBMED   8885278
REFERENCE   4  (residues 1 to 110)
  AUTHORS   Bischoff,D.S. and Ordal,G.W.
  TITLE     Identification and characterization of FliY, a novel component of
            the Bacillus subtilis flagellar switch complex
  JOURNAL   Mol Microbiol 6 (18), 2715-2723 (1992)
   PUBMED   1447979
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013236.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01052.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Salipiger sp. PrR002"
                     /db_xref="taxon:2706489"
     Protein         1..110
                     /product="FliM/FliN family flagellar motor switch protein"
                     /calculated_mol_wt=11746
     Region          13..105
                     /region_name="PRK08916"
                     /note="flagellar motor switch protein FliN"
                     /db_xref="CDD:236350"
ORIGIN      
        1 madeaetkqe eigaeaapkp apgkadsqgi damlnvglnv qivlgqtrmp iaqllklsrg
       61 siieldksig qpvevminer lvargdlvrl pddrlgvsli eivkdyvsee
//
LOCUS       WP_235952963             586 aa            linear   BCT 02-MAR-2025
DEFINITION  polysaccharide deacetylase family protein [Noviherbaspirillum
            galbum].
ACCESSION   WP_235952963
VERSION     WP_235952963.1
KEYWORDS    RefSeq.
SOURCE      Noviherbaspirillum galbum
  ORGANISM  Noviherbaspirillum galbum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Noviherbaspirillum.
REFERENCE   1  (residues 1 to 586)
  AUTHORS   Freiberg,C., Fellay,R., Bairoch,A., Broughton,W.J., Rosenthal,A.
            and Perret,X.
  TITLE     Molecular basis of symbiosis between Rhizobium and legumes
  JOURNAL   Nature 387 (6631), 394-401 (1997)
   PUBMED   9163424
REFERENCE   2  (residues 1 to 586)
  AUTHORS   Mishra,C., Semino,C.E., McCreath,K.J., de la Vega,H., Jones,B.J.,
            Specht,C.A. and Robbins,P.W.
  TITLE     Cloning and expression of two chitin deacetylase genes of
            Saccharomyces cerevisiae
  JOURNAL   Yeast 13 (4), 327-336 (1997)
   PUBMED   9133736
REFERENCE   3  (residues 1 to 586)
  AUTHORS   Millward-Sadler,S.J., Poole,D.M., Henrissat,B., Hazlewood,G.P.,
            Clarke,J.H. and Gilbert,H.J.
  TITLE     Evidence for a general role for high-affinity non-catalytic
            cellulose binding domains in microbial plant cell wall hydrolases
  JOURNAL   Mol Microbiol 11 (2), 375-382 (1994)
   PUBMED   8170399
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013672.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01522.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Noviherbaspirillum galbum"
                     /db_xref="taxon:2709383"
     Protein         1..586
                     /product="polysaccharide deacetylase family protein"
                     /GO_function="GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=64624
     Region          288..501
                     /region_name="CE4_SF"
                     /note="Catalytic NodB homology domain of the carbohydrate
                     esterase 4 superfamily; cl15692"
                     /db_xref="CDD:472828"
ORIGIN      
        1 mrlavllvam sglvlspfar sadagpagas fpvylyaspa tqaffqaneg nydtilgqwr
       61 tylrdtgkdf relgradlla qpprgvlvla salllddqer raveefgrrg gsilgswavg
      121 ardgkgewrg fqfvqdlfdl rvageitrqs eewfiapsgd gpltwplpag rrmylgkiae
      181 nplridarnv aarymtwers rdpalangai afserydsrr vyfgfsepam dfhprddiyr
      241 mldailawlr heprvykaaw pggrlaaqli amevdgaaes vaalsqqlda lglrasffli
      301 tsqagafpdl lrslarrghe layqadvpdg fkdqnaeiqe qrmlamfadv rkiggpgpla
      361 lhgfrapnes ydqsteillr rhgmqyhvad aaatidrlpy fssaekavpp esalvvlprt
      421 sledleyrgd amneeragmq lvreyeealn mgalnmllih assyasgspv naalpaffrr
      481 ladsrdktwv araddiaaww rardrasvkv rgegrgqvve ltvrapgigp gltlmatqpe
      541 tggppprlep mtpyspaveg rlvdnhraaf vfnrlgagsy syrvly
//
LOCUS       WP_235953223             340 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphatase PAP2 family protein [Salipiger sp. PrR002].
ACCESSION   WP_235953223
VERSION     WP_235953223.1
KEYWORDS    RefSeq.
SOURCE      Salipiger sp. PrR002
  ORGANISM  Salipiger sp. PrR002
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025736.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14378.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Salipiger sp. PrR002"
                     /db_xref="taxon:2706489"
     Protein         1..340
                     /product="phosphatase PAP2 family protein"
                     /calculated_mol_wt=37094
ORIGIN      
        1 mmqatpafrf ftfgafyaaa slafalltrd gvfdhllssl avgtrvpvqm ftlfcivlvf
       61 allrakrrkq gtvamvalqi tlaylgvaal nfgftlfktg mpallpyfad plladldawl
      121 hggtdpwrlv ddtlgsdvar qilpvyqgpw lllaflfpvl lvatdddsar vsrfltlyca
      181 awvlignlla laglsvgpiy ydrllgtarf telqqmldtq gvdqiflgqv qeflwrmyrs
      241 gkhalgtgis afpsvhvsva ftvtlycler sallvlpgla faaailllsv wsgyhyaidg
      301 yvsilamlgl wgwqhlrars preiasdpva daaareaqgs
//
LOCUS       WP_235953258             304 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Salipiger sp.
            PrR002].
ACCESSION   WP_235953258
VERSION     WP_235953258.1
KEYWORDS    RefSeq.
SOURCE      Salipiger sp. PrR002
  ORGANISM  Salipiger sp. PrR002
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Salipiger sp. PrR002"
                     /db_xref="taxon:2706489"
     Protein         1..304
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=33192
     Region          1..300
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(6,8..9,11,30..31,71..73,113..115,140,144,167..170)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(91,115,140,144)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 migvygangf igrhvverll argqavravs rrfdsrvaaa wedrldlvea dftnplstls
       61 tvqgldtviq lisssspgmg nrvlvddiqe nviphvsfiq kaisagvrry ifvssggtvy
      121 gpnapvptae tahtnpinsh gmtklmieky lqmfsrvdgl eyvilrvsnp ygpgqtfrkg
      181 qglipailqr qreslpiqif gdgssqrdyi yiddltaave kvvdcpsagn evfnigkgeg
      241 rsilevietl eatlgvcfek eflpgrntdv srsvldiska crllswapgi sleegverml
      301 vpwr
//
LOCUS       WP_235953260             172 aa            linear   BCT 02-MAR-2025
DEFINITION  type II secretion system protein GspM [Noviherbaspirillum galbum].
ACCESSION   WP_235953260
VERSION     WP_235953260.1
KEYWORDS    RefSeq.
SOURCE      Noviherbaspirillum galbum
  ORGANISM  Noviherbaspirillum galbum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Noviherbaspirillum.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Desvaux,M., Hebraud,M., Talon,R. and Henderson,I.R.
  TITLE     Secretion and subcellular localizations of bacterial proteins: a
            semantic awareness issue
  JOURNAL   Trends Microbiol 17 (4), 139-145 (2009)
   PUBMED   19299134
REFERENCE   2  (residues 1 to 172)
  AUTHORS   Desvaux,M., Parham,N.J., Scott-Tucker,A. and Henderson,I.R.
  TITLE     The general secretory pathway: a general misnomer?
  JOURNAL   Trends Microbiol 12 (7), 306-309 (2004)
   PUBMED   15223057
REFERENCE   3  (residues 1 to 172)
  AUTHORS   Peabody,C.R., Chung,Y.J., Yen,M.R., Vidal-Ingigliardi,D.,
            Pugsley,A.P. and Saier,M.H.
  TITLE     Type II protein secretion and its relationship to bacterial type IV
            pili and archaeal flagella
  JOURNAL   Microbiology (Reading) 149 (Pt 11), 3051-3072 (2003)
   PUBMED   14600218
REFERENCE   4  (residues 1 to 172)
  AUTHORS   Sandkvist,M., Hough,L.P., Bagdasarian,M.M. and Bagdasarian,M.
  TITLE     Direct interaction of the EpsL and EpsM proteins of the general
            secretion apparatus in Vibrio cholerae
  JOURNAL   J Bacteriol 181 (10), 3129-3135 (1999)
   PUBMED   10322014
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04612.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Noviherbaspirillum galbum"
                     /db_xref="taxon:2709383"
     gene            1..172
                     /gene="gspM"
     Protein         1..172
                     /product="type II secretion system protein GspM"
                     /GO_component="GO:0015627 - type II protein secretion
                     system complex [Evidence IEA]"
                     /GO_process="GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /calculated_mol_wt=18741
     Region          8..170
                     /region_name="PulM"
                     /note="Type II secretory pathway, component PulM
                     [Intracellular trafficking, secretion, and vesicular
                     transport]; COG3149"
                     /db_xref="CDD:442383"
ORIGIN      
        1 mkqrtpamsq frqqvasfwg drnprerril gagaialvlv lyyvllidpa lggramlqkq
       61 lpslrqqtae vqsmtreate lggktrpppp llskdmidsa lssrglksqs vvvtgeqvkv
      121 qlngasfagi tdwladaqrt arlavtdani eaqekqdtvn atitlrqqrt aq
//
LOCUS       WP_235953334             237 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase domain-containing protein [Salipiger sp. PrR002].
ACCESSION   WP_235953334
VERSION     WP_235953334.1
KEYWORDS    RefSeq.
SOURCE      Salipiger sp. PrR002
  ORGANISM  Salipiger sp. PrR002
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025033.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13649.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Salipiger sp. PrR002"
                     /db_xref="taxon:2706489"
     Protein         1..237
                     /product="methyltransferase domain-containing protein"
                     /calculated_mol_wt=25719
     Region          2..232
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(22..28,44..45,65..67,82)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
ORIGIN      
        1 mrpaldllra lpalpegpvv dlgcgagdvg palaqlgrrl egvdlspaml dkaratgcyd
       61 alhqadisaw haesppalif snaalhwthg hdillprlla mlapggtlav qvpaqnnaps
      121 hrmwlalvee rypgrvdpat ipgilrpaey hallapqget alweteyyqy lapqenghpv
      181 rhftqatfar pvleplteae rtelvaayea virtvypmde sggalfpfrr lfftvti
//
LOCUS       WP_235953454             147 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Noviherbaspirillum galbum].
ACCESSION   WP_235953454
VERSION     WP_235953454.1
KEYWORDS    RefSeq.
SOURCE      Noviherbaspirillum galbum
  ORGANISM  Noviherbaspirillum galbum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Noviherbaspirillum.
REFERENCE   1  (residues 1 to 147)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Noviherbaspirillum galbum"
                     /db_xref="taxon:2709383"
     Protein         1..147
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=15815
     Region          22..141
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(120..123,125)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 mpaflftphh hdsdmtpdtp lktilyvedd adiravakia leivggfslh vcsggseavs
       61 aieqgirpdl vlldvmmpgm dgpttlkalr afgelastpv ifmtakvqpr eveqyqamga
      121 igviakpfnp mtlaqqvrkl wedrnga
//
LOCUS       WP_235953530             234 aa            linear   BCT 02-MAR-2025
DEFINITION  endonuclease/exonuclease/phosphatase family protein
            [Noviherbaspirillum galbum].
ACCESSION   WP_235953530
VERSION     WP_235953530.1
KEYWORDS    RefSeq.
SOURCE      Noviherbaspirillum galbum
  ORGANISM  Noviherbaspirillum galbum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Noviherbaspirillum.
REFERENCE   1  (residues 1 to 234)
  AUTHORS   Dlakic,M.
  TITLE     Functionally unrelated signalling proteins contain a fold similar
            to Mg2+-dependent endonucleases
  JOURNAL   Trends Biochem Sci 25 (6), 272-273 (2000)
   PUBMED   10838565
REFERENCE   2  (residues 1 to 234)
  AUTHORS   Mol,C.D., Kuo,C.F., Thayer,M.M., Cunningham,R.P. and Tainer,J.A.
  TITLE     Structure and function of the multifunctional DNA-repair enzyme
            exonuclease III
  JOURNAL   Nature 374 (6520), 381-386 (1995)
   PUBMED   7885481
REFERENCE   3  (residues 1 to 234)
  AUTHORS   Lahm,A. and Suck,D.
  TITLE     DNase I-induced DNA conformation. 2 A structure of a DNase
            I-octamer complex
  JOURNAL   J Mol Biol 222 (3), 645-667 (1991)
   PUBMED   1748997
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015338.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03372.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Noviherbaspirillum galbum"
                     /db_xref="taxon:2709383"
     Protein         1..234
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=25979
     Region          27..230
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(35,107,131,133,194,222..223)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197320"
     Site            order(35,222)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:197320"
     Site            order(107,133,223)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197320"
ORIGIN      
        1 mkvatlnlrh gggtrvvala arlaaldcdv lvltefrcnr hgqwleqtla hsgyhhfmai
       61 vapektntva iasrlpftfd dtvcqgmelr srllpvaigs lrlvgayfpq grhkrpvfdw
      121 llheglawmg ddgivlgdln tglhgideag htfaetarfr qlgtgplvda wrtrhgdarq
      181 fswysnhgng fridhlfctq rrydllqaia ydhaprlsge sdhaaliamf hstt
//
LOCUS       WP_235953579             369 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Noviherbaspirillum galbum].
ACCESSION   WP_235953579
VERSION     WP_235953579.1
KEYWORDS    RefSeq.
SOURCE      Noviherbaspirillum galbum
  ORGANISM  Noviherbaspirillum galbum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Noviherbaspirillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Noviherbaspirillum galbum"
                     /db_xref="taxon:2709383"
     Protein         1..369
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=40496
     Region          <12..308
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mpnltvyrpl tpskdpgyad aqmpylksll kqitdknais lvwfytpmal pllegvdpdr
       61 vvydcmdels lfknppagll eredallkra divftggpsl yrakkdrhpd vhcfpssvda
      121 shfrqaldrn iahpsqeslp hprlgfygvi derldtdlva rvadarpewq ivlvgpvaqk
      181 idadtlpqrp nihylgqqsy adlpkflaaw dvclmpfamn estrfisptk sleymaaelp
      241 ivstpvtdvv dlhsdvveia atpeefiaac ervlsmssea irariramre klsrtswdat
      301 aesmrtllda lleeradmve nlaaasvsna anaasashrv aasrsmeasp rtglaaapra
      361 gsqaaindd
//
LOCUS       WP_235953581             536 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3369 domain-containing protein [Noviherbaspirillum galbum].
ACCESSION   WP_235953581
VERSION     WP_235953581.1
KEYWORDS    RefSeq.
SOURCE      Noviherbaspirillum galbum
  ORGANISM  Noviherbaspirillum galbum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Noviherbaspirillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023277.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11849.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Noviherbaspirillum galbum"
                     /db_xref="taxon:2709383"
     Protein         1..536
                     /product="DUF3369 domain-containing protein"
                     /calculated_mol_wt=59298
     Region          35..169
                     /region_name="CitB"
                     /note="DNA-binding response regulator DpiB of
                     citrate/malate metabolism [Transcription, Signal
                     transduction mechanisms]; COG4565"
                     /db_xref="CDD:443622"
     Region          159..326
                     /region_name="DUF3369"
                     /note="Domain of unknown function (DUF3369); pfam11849"
                     /db_xref="CDD:432127"
     Region          <312..526
                     /region_name="HDGYP"
                     /note="HD-GYP domain, c-di-GMP phosphodiesterase class II
                     (or its inactivated variant) [Signal transduction
                     mechanisms]; COG2206"
                     /db_xref="CDD:441808"
ORIGIN      
        1 mntrdimaae resdddwlle dqpahagddp giqvrpfril ivddeadvhs vtrlalrgvt
       61 fkgkplells aysgaeafal lqrerdialc lldvvmetdd aglrlverir seldnqllri
      121 vlrtgqpgqa peqrvivdyd indykaktel ttqklftmvi aslrayeslv tiessrigla
      181 kilegasnly qvqslrefas gvlkqisail dvgaegvlcv lgkgtvpgmn gptviagtgn
      241 yaslvevesl pdnhcltngi lsafrekqsr hghpvdvlfv hteqghefai aitpawplad
      301 mqrnllevfc qrigaafdnl ylfgqlrkaq eatvaaladl aefrdedtgg hvrrvqlltd
      361 mitrrlhdrq acadeltphl mdligmasil hdvgkvstpd nillkpgiht peertimqrh
      421 asvgeqilrr aaemvdgety ltfgaqiagg hhehfdgrgy prglkgkdip lsarivavvd
      481 vfdallhrrp ykepwtmeat laflrerrgt qfdpevidal islmdesipe wltasd
//
LOCUS       WP_235953687             522 aa            linear   BCT 02-MAR-2025
DEFINITION  pesticin C-terminus-like muramidase [Acinetobacter terrae].
ACCESSION   WP_235953687
VERSION     WP_235953687.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter terrae
  ORGANISM  Acinetobacter terrae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter Taxon 24.
REFERENCE   1  (residues 1 to 522)
  AUTHORS   Patzer,S.I., Albrecht,R., Braun,V. and Zeth,K.
  TITLE     Structural and mechanistic studies of pesticin, a bacterial homolog
            of phage lysozymes
  JOURNAL   J Biol Chem 287 (28), 23381-23396 (2012)
   PUBMED   22593569
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028064.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16754.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Acinetobacter terrae"
                     /db_xref="taxon:2731247"
     Protein         1..522
                     /product="pesticin C-terminus-like muramidase"
                     /EC_number="3.2.1.17"
                     /GO_function="GO:0003796 - lysozyme activity [Evidence
                     IEA]"
                     /calculated_mol_wt=59186
     Region          316..456
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
ORIGIN      
        1 msslvtitsk fydesgrrvi nlnvksrykg strenqqktd gkgffifqas snrtieilak
       61 ppntkdytvf ktinssvisf itnpikvylp ktieeyrken ikipqsktvk nffkvvdsng
      121 kvmtnfpiqs rpkgkkafer stnkegvaei esspnreiei lvlasnekfi lkksvnsgng
      181 sqqpilikld epydsfksls titlldrndn kyivektnve ivvqdskekn iittsngkit
      241 vrshigkwik itvykpdgtp lksldylpqr inessvklhl dvdvtkggtq qdkpvinksi
      301 nhkdcsseci iqtysfetsl gtmiiskesl esilkwekye sqpyvpskgg dgksgvtlgy
      361 gydlgqqste qikkdltlyy tpnqiqrllk aqgkkgvsaq vlvsslsdit isknkaydmv
      421 mivkkryaed tlkiypdilk yhphcqgail slvynryigl kgnrrkemre iqedlkksgs
      481 nvpislrsmk rlwttkqnrg lqarredeak ifekglkcdc yk
//
LOCUS       WP_235953778             764 aa            linear   BCT 02-MAR-2025
DEFINITION  family 20 glycosylhydrolase [Mucilaginibacter inviolabilis].
ACCESSION   WP_235953778
VERSION     WP_235953778.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter inviolabilis
  ORGANISM  Mucilaginibacter inviolabilis
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
REFERENCE   1  (residues 1 to 764)
  AUTHORS   Tews,I., Perrakis,A., Oppenheim,A., Dauter,Z., Wilson,K.S. and
            Vorgias,C.E.
  TITLE     Bacterial chitobiase structure provides insight into catalytic
            mechanism and the basis of Tay-Sachs disease
  JOURNAL   Nat Struct Biol 3 (7), 638-648 (1996)
   PUBMED   8673609
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012931.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00728.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Mucilaginibacter inviolabilis"
                     /db_xref="taxon:2714892"
     Protein         1..764
                     /product="family 20 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=85647
     Region          1..598
                     /region_name="Chb"
                     /note="N-acetyl-beta-hexosaminidase [Carbohydrate
                     transport and metabolism]; COG3525"
                     /db_xref="CDD:442747"
     Region          627..761
                     /region_name="PA14"
                     /note="PA14 domain; cl08459"
                     /db_xref="CDD:471833"
ORIGIN      
        1 mktiskylla atlmftcvda anaqetaarf plipyptqlv agkgafiinn ktsittakqf
       61 tdeanqlnql llkglgkklp ivkgnkanai nlvydaslta peaykltisk qqviiaakda
      121 agmfhgieti rqllpvsvek gkmaktlllp vvtiqdqpay awrgmhldvs rhffsinylk
      181 kfidrmalyk mnkfhlhltd dqgwrieikk ypklteegaw rtfnnqdsac mkkakdnpdf
      241 vidkehivqr ngktmyggfy tqqemkgvva yaaarhidii peidmpghmm aainsypflt
      301 cngenswgtl ftkpicpgle styefaqnvy seimdifpsq yihiggdevd rtdwgksadc
      361 kalmeregik dlpalqsyfi nrmekffnsk grkligwdei ieggisptai imywrtwvpd
      421 apvkavkngn tvimtpgepl yfdyqpdqys vdkvyhfnpi pkalnaeeak siigaqaniw
      481 temipsekra dymymprlta laemlwtnkp dkydsyqkrl vkqysrmdam ninyrlpdlp
      541 gllnnyvftd egslsinkpl psliiryttd gslpdvksre lpealsitnn etvrvaafta
      601 ngtrgdvynl nytkqymlgp ikvrstkpgl dckyykayfk qtslmkkarv dstftataie
      661 vpstvkapsf giaykgyidv padgiysfyl taddgavlki gpatvvdndg nhsaqersgq
      721 ialkmglhpf aldfiegggg ftlklqysvn gsarqdvpae wlkn
//
LOCUS       WP_235953882             534 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6377 domain-containing protein [Mucilaginibacter inviolabilis].
ACCESSION   WP_235953882
VERSION     WP_235953882.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter inviolabilis
  ORGANISM  Mucilaginibacter inviolabilis
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039744.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19904.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Mucilaginibacter inviolabilis"
                     /db_xref="taxon:2714892"
     Protein         1..534
                     /product="DUF6377 domain-containing protein"
                     /calculated_mol_wt=61266
     Region          257..496
                     /region_name="DUF6377"
                     /note="Domain of unknown function (DUF6377); pfam19904"
                     /db_xref="CDD:466227"
     Region          <479..521
                     /region_name="CsgD"
                     /note="DNA-binding transcriptional regulator, CsgD family
                     [Transcription]; COG2771"
                     /db_xref="CDD:442052"
ORIGIN      
        1 mkrsvpvilf llltgsyvmg qgndslltll nntlgkkkaf deakqarivn lqkelrtagn
       61 tslvlkydic lklyneyksf nyneafnyaq klqqtghlln dptkiaysri klgfillssg
      121 mfketfdslk tvnaqlldta arreyyflta rtyydladfd kdnyytpiyn sraenyidsa
      181 trlsainsfd yiyykglksl krghidtava nlkllmdqhr ltdhqfavta stlsdiyirk
      241 nqpgaainll vqaamadvks stkeaaamtn laqllhqqgd vknaytfika arddadyyga
      301 rqrkiqvnai lpviageris yveqqrkvlf lyallltvla ivivvfavii ykqlqklkqa
      361 dkviqdtnhs lqesikklne anrikeeyig yffnliaeyi nkldkfkrsv dnklvtkrfd
      421 dihklvsnid lakereelfi nfdkaflklf pnfiieynal fgkenhvkll pkqllntdlr
      481 ifalirlgit dtekiahile ysvntiynyr arikgksnip neefehkima ikav
//
LOCUS       WP_235953983              77 aa            linear   BCT 02-MAR-2025
DEFINITION  GIY-YIG nuclease family protein [Actinomyces faecalis].
ACCESSION   WP_235953983
VERSION     WP_235953983.1
KEYWORDS    RefSeq.
SOURCE      Actinomyces faecalis
  ORGANISM  Actinomyces faecalis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Actinomycetales; Actinomycetaceae; Actinomyces.
REFERENCE   1  (residues 1 to 77)
  AUTHORS   Martin-Castellanos,C., Blanco,M., Rozalen,A.E., Perez-Hidalgo,L.,
            Garcia,A.I., Conde,F., Mata,J., Ellermeier,C., Davis,L.,
            San-Segundo,P., Smith,G.R. and Moreno,S.
  TITLE     A large-scale screen in S. pombe identifies seven novel genes
            required for critical meiotic events
  JOURNAL   Curr Biol 15 (22), 2056-2062 (2005)
   PUBMED   16303567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024847.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13455.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Actinomyces faecalis"
                     /db_xref="taxon:2722820"
     Protein         1..77
                     /product="GIY-YIG nuclease family protein"
                     /calculated_mol_wt=9018
     Region          <7..45
                     /region_name="GIY-YIG_SF"
                     /note="GIY-YIG nuclease domain superfamily; cl15257"
                     /db_xref="CDD:472790"
ORIGIN      
        1 mrrlfrtwsv etelhryfad kranrintrr effyatpaev rdalakitgn lleiteepka
       61 eqyrlsvqla tddaqte
//
LOCUS       WP_235954246             141 aa            linear   BCT 02-MAR-2025
DEFINITION  YqaE/Pmp3 family membrane protein [Limnovirga soli].
ACCESSION   WP_235954246
VERSION     WP_235954246.1
KEYWORDS    RefSeq.
SOURCE      Limnovirga soli
  ORGANISM  Limnovirga soli
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Limnovirga.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   Wang,L.Y. and Shiozaki,K.
  TITLE     The fission yeast stress MAPK cascade regulates the pmp3+ gene that
            encodes a highly conserved plasma membrane protein
  JOURNAL   FEBS Lett 580 (10), 2409-2413 (2006)
   PUBMED   16603158
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013814.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01679.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Limnovirga soli"
                     /db_xref="taxon:2656915"
     Protein         1..141
                     /product="YqaE/Pmp3 family membrane protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=15526
ORIGIN      
        1 mkrnqlksiv lglmaillfv patfaitldn vvpdeqpatt vttdqaaadn alsefkslsk
       61 qdkkerlada kkqmkqykkd kkagnadtse ntlllvilai llpplavylh enaingkfwl
      121 dllltlfffl pgiiyalivi l
//
LOCUS       WP_235954386             701 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-L-arabinofuranosidase C-terminal domain-containing protein
            [Limnovirga soli].
ACCESSION   WP_235954386
VERSION     WP_235954386.1
KEYWORDS    RefSeq.
SOURCE      Limnovirga soli
  ORGANISM  Limnovirga soli
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Limnovirga.
REFERENCE   1  (residues 1 to 701)
  AUTHORS   Gilead,S. and Shoham,Y.
  TITLE     Purification and characterization of alpha-L-arabinofuranosidase
            from Bacillus stearothermophilus T-6
  JOURNAL   Appl Environ Microbiol 61 (1), 170-174 (1995)
   PUBMED   7887599
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018647.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06964.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Limnovirga soli"
                     /db_xref="taxon:2656915"
     Protein         1..701
                     /product="alpha-L-arabinofuranosidase C-terminal
                     domain-containing protein"
                     /GO_function="GO:0046556 - alpha-L-arabinofuranosidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0046373 - L-arabinose metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=78144
     Region          257..700
                     /region_name="AbfA"
                     /note="Alpha-L-arabinofuranosidase [Carbohydrate transport
                     and metabolism]; COG3534"
                     /db_xref="CDD:442755"
     Region          484..691
                     /region_name="Alpha-L-AF_C"
                     /note="Alpha-L-arabinofuranosidase C-terminal domain;
                     pfam06964"
                     /db_xref="CDD:462053"
ORIGIN      
        1 mkkmlgvvgf mgcavlsgya qqttltldin kpgadvspml yglmteeinh sydgglyael
       61 irnrifkdnk kipdgwslvk dnaadtanik lmatseeyvp yderkhaing slttclrltv
      121 ekasgrvgia negywgipvt pataykasfy lkgtersepf rwpwepkpnt ppladipnnt
      181 pgpitvsies kdgktvyasg tiqleksmyw kkyeltltta gniqptkdar fvistdrtgl
      241 yyfnlvslfp ptfnnrengn rqdlmqmlvd mkpkflrfpg gnylegplit dafpwkttlg
      301 mlenrpghng swgyrasdgm glleflewce dmgaepllgl yagyslqgdh vdsgpllkty
      361 iddaldeiey vtgdantywg akriadghpa pfkltyveig nedwfdrsns ydgrfkqfre
      421 aieakypnli cistipatqy psmsvkgkea avvdehyyrn awdmwenasq ydtydrkgpk
      481 ifvgewatre gipttnlnaa fgdaawmtgm ernsdliims cyaplfvnvs kdsatgtraw
      541 qwdsdligyd alnsygspsy yvqklfnlyl gnkivpatfe nvplqnkpls ktdsaegkkp
      601 vsaptlfysa trndatgiiy lkivnasakk qnikinlkcv atiepeatmi vikgnqpddt
      661 ntimnrenil pvtstikgik tsftktidpy svniielktg k
//
LOCUS       WP_235954527             492 aa            linear   BCT 02-MAR-2025
DEFINITION  SusD/RagB family nutrient-binding outer membrane lipoprotein
            [Cyclobacterium salsum].
ACCESSION   WP_235954527
VERSION     WP_235954527.1
KEYWORDS    RefSeq.
SOURCE      Cyclobacterium salsum
  ORGANISM  Cyclobacterium salsum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Cyclobacterium.
REFERENCE   1  (residues 1 to 492)
  AUTHORS   Koropatkin,N., Martens,E.C., Gordon,J.I. and Smith,T.J.
  TITLE     Structure of a SusD homologue, BT1043, involved in mucin O-glycan
            utilization in a prominent human gut symbiont
  JOURNAL   Biochemistry 48 (7), 1532-1542 (2009)
   PUBMED   19191477
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024181.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12771.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Cyclobacterium salsum"
                     /db_xref="taxon:2666329"
     Protein         1..492
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /calculated_mol_wt=55297
     Region          29..460
                     /region_name="SusD-like_2"
                     /note="Starch-binding associating with outer membrane;
                     pfam12771"
                     /db_xref="CDD:463695"
ORIGIN      
        1 mklkyiliaf slltlsfsce kfeemnenpn epaevstnvl lpsairqsvn thvtesfllg
       61 nniaqltakt lrtevddyrw nafptvwegf yksltdivvi erkavedgne vlegativlk
      121 swifsnltns ygdipytsai ngfdseftpe ydlqediyad lldelsrant llasgngvig
      181 sgdillggda nhwirfcnsl rlrllmsann qmpdagtqfa qivaeediit snnenvildy
      241 ltgfpnqfpt lplktgdfda valsstllgi mdenkdprls ryarpdnddy snptftgadn
      301 gvgescatsg srlgpqffdd pnqtsatelg ledpngiiit ysevafllae aadkgwidna
      361 vephyrngik asmdyyrvny qafgwedfdd fynqpgltyt drkdiweqkw qalyfnglep
      421 yfelrrwyfe sgmsfdgipf iyaacennnn nelplrflyp geeqslneaa yqkaierldg
      481 gnnfnasiwl ve
//
LOCUS       WP_235954553            2146 aa            linear   BCT 02-MAR-2025
DEFINITION  PKD domain-containing protein [Cyclobacterium salsum].
ACCESSION   WP_235954553
VERSION     WP_235954553.1
KEYWORDS    RefSeq.
SOURCE      Cyclobacterium salsum
  ORGANISM  Cyclobacterium salsum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Cyclobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040138.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18911.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2146
                     /organism="Cyclobacterium salsum"
                     /db_xref="taxon:2666329"
     Protein         1..2146
                     /product="PKD domain-containing protein"
                     /calculated_mol_wt=230187
     Region          316..364
                     /region_name="SprB"
                     /note="SprB repeat; pfam13573"
                     /db_xref="CDD:404462"
     Region          639..669
                     /region_name="SprB"
                     /note="SprB repeat; pfam13573"
                     /db_xref="CDD:404462"
     Region          718..754
                     /region_name="SprB"
                     /note="SprB repeat; pfam13573"
                     /db_xref="CDD:404462"
     Region          902..932
                     /region_name="SprB"
                     /note="SprB repeat; pfam13573"
                     /db_xref="CDD:404462"
     Region          1159..1194
                     /region_name="SprB"
                     /note="SprB repeat; pfam13573"
                     /db_xref="CDD:404462"
     Region          1421..1456
                     /region_name="SprB"
                     /note="SprB repeat; pfam13573"
                     /db_xref="CDD:404462"
     Region          1511..1541
                     /region_name="SprB"
                     /note="SprB repeat; pfam13573"
                     /db_xref="CDD:404462"
     Region          1668..1704
                     /region_name="SprB"
                     /note="SprB repeat; pfam13573"
                     /db_xref="CDD:404462"
     Region          1825..1855
                     /region_name="SprB"
                     /note="SprB repeat; pfam13573"
                     /db_xref="CDD:404462"
     Region          <1989..2047
                     /region_name="PKD_4"
                     /note="PKD domain; pfam18911"
                     /db_xref="CDD:436824"
     Region          2058..2144
                     /region_name="CHU_C"
                     /note="CHU_C Type IX secretion signal domain; cl21544"
                     /db_xref="CDD:473906"
ORIGIN      
        1 maslmvifsi iqskgngwnl fapititgqa nvsiyydetk eitldmltid yggdpddlti
       61 qvepgtgytn tgnsinrtie yddewaaage eimvnvtvsd gadqadfelt vlvippltqt
      121 sysentclgt isltvrayrp dpsvasasfp fvftlstldd eiideiefns nfpgqgsasa
      181 tfggmdldln rntaykirve dnlgrifere agpigeaysl dfdlnvsgpl cagdpggvve
      241 yiiynaevpl ssfgiydedg nlvtelydii sltedyivvn adnlgsgnft levtdrfgcm
      301 gseefeivlp epitatesiq npscfgdsdg qidlsisggw sqpfdgspie aardysiqwy
      361 nssgdelgtg tnspietage ivgmesvlsg lsagryyaei tesvrrfeip dadplvctfv
      421 tptyvvegpe pldldavand ischgagdgf lsisptggte aytvnwyegn fadldapdas
      481 glsplpeqgg egsfqrqgip sgdyavwltd angcfvaenf sisepdplsi fertdlrenv
      541 qcfgeesgti vvevdgatts pyffevfkdg aataitadpi vslgfspvyf tdlpageyri
      601 qvtdsngctf didgilieqp atglvieepv isdyngfais canasdgsie ltitggagal
      661 eylwtgpggf estekdiydl spgqyqflvt dennctatig svemiapppl alevdipsyn
      721 ffeiscngse dgsitslpsg gtgdysydwt gpdgftaagp tidnlgpgly slvvtdengc
      781 saqadyfldq paplvisenp derenitcfg ndtgaltisl iptlppfdle lglagetdpl
      841 rtitdfpgei yeftdleagn ywvrvrning ctdivedipi tqpatglelt nvmvsdyngf
      901 eisctgandg sislevtggq gdvnfswtgp ggftsesnvl tdlapgsyel lvtdesgctl
      961 aetfeltepe sltvsedisd fngfgiqchg gdqgfitlsl sggvapltin wtgpggfvss
     1021 epalenleag lyevsitdqn gceisssynl lepeeleiie laeekvdvac fgqetgrlgv
     1081 glsrastgpy qfslensdgt itredlanpv ttwivenlpa gtyrvqvtdg ngcqqeindl
     1141 eitqpeegvq iesievsdyn gfniscfgag dgfievlvtg gsgnydfswt gpngfssdqa
     1201 vitdlgpgsy qvtvadengc rlsetvdlte pevlalsdev sdfngfaiqc nggnegfinl
     1261 slsggvepls iswsgpdgfs ssqpsvenla agayeltvld qngcqinrty nlqepealei
     1321 meldeekidv acfgqetgql gvnllqtsla pyhyrlldqe gtliqeleds ndtnwivenl
     1381 pagtyrvqvs dgndcleela dleitqpeag vqidfidisd yngfniscfg agdgfidvtv
     1441 sggsgnyafs wtgpdgfrsd earieglepg tyqvtltden gcairseale ilspeplein
     1501 pelsefndfe iscfeaadgy vrlataggtg sytytwsgpn gfsseaseis glspgtyevl
     1561 vqdengcevr qafvlnqpea ltvdlieqvd vlcfgeatgs idiavgggvp nsyafewkrd
     1621 gaviestsqn ldaipagsys ltvtdangct aripeinilq peaaleltln qtpiscynan
     1681 danlsvdieg gvepyqvswn igstqreftg igpgfyqvtv tdangctqir dtviedlpvy
     1741 dinpevvpis chgaadgsil lnleggeapv ravwdhgpeq sslynlgpge yrvvledakg
     1801 ctiertfnlv epdllvvveq iqdalscedg qsgsidlivs ggtppyaynw sngatspgis
     1861 gltngtysvd itdqsgcfvs qtfrvnrpap ividlvstts ascepreire tfdinidggv
     1921 apydiqwssg dvsadgyrme tdepgtyfvt vtdgygcvqs rsfevdnsqi lvdgdfasss
     1981 lpvygenlvn ydvqftnnss gnirsyywdf gdgnnsleaa plhryqeagl yqveltafdd
     2041 wgcetstnfe ieildfflev pnvfspngdg indtffpkfl yietlsftim nkwgeilfht
     2101 eeldskgwdg tyrgqkaipg nyiykinftt tdgrtfsdtg almlle
//
LOCUS       WP_235954579             761 aa            linear   BCT 02-MAR-2025
DEFINITION  Piwi domain-containing protein [Cyclobacterium salsum].
ACCESSION   WP_235954579
VERSION     WP_235954579.1
KEYWORDS    RefSeq.
SOURCE      Cyclobacterium salsum
  ORGANISM  Cyclobacterium salsum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Cyclobacterium.
REFERENCE   1  (residues 1 to 761)
  AUTHORS   Song,J.J., Smith,S.K., Hannon,G.J. and Joshua-Tor,L.
  TITLE     Crystal structure of Argonaute and its implications for RISC slicer
            activity
  JOURNAL   Science 305 (5689), 1434-1437 (2004)
   PUBMED   15284453
REFERENCE   2  (residues 1 to 761)
  AUTHORS   Cerutti,L., Mian,N. and Bateman,A.
  TITLE     Domains in gene silencing and cell differentiation proteins: the
            novel PAZ domain and redefinition of the Piwi domain
  JOURNAL   Trends Biochem Sci 25 (10), 481-482 (2000)
   PUBMED   11050429
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014250.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02171.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Cyclobacterium salsum"
                     /db_xref="taxon:2666329"
     Protein         1..761
                     /product="Piwi domain-containing protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /calculated_mol_wt=88442
     Region          312..739
                     /region_name="Piwi-like"
                     /note="PIWI domain. Domain found in proteins involved in
                     RNA silencing. RNA silencing refers to a group of related
                     gene-silencing mechanisms mediated by short RNA molecules,
                     including siRNAs, miRNAs, and heterochromatin-related
                     guide RNAs. The central component...; cl00628"
                     /db_xref="CDD:412485"
     Site            order(440,444,455..458,461,472,476,480)
                     /site_type="active"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240017"
     Site            order(503,505,581,730)
                     /site_type="active"
                     /db_xref="CDD:240017"
ORIGIN      
        1 mnmnlnyfpi hfdfsnyqii tkpysddlle klrlkynnwy sffryddliv vsnkddddnq
       61 ltgeveqrsv fednrvtssl vkhiffrtfk gfvpvdfypf rfysrqekdd lilsflpesl
      121 khkisfkkli evqlretnin gtkgfafvvn irrnwvfnis ckelakegfd ltdfevlhae
      181 vlpgldnila pneefvgtlh aikgdtalvy tnegeknypl dklfirktrk niqeylnfai
      241 gqqkselils avrkeqisrq npehllkeit riakylfseq gepilfqnkd gfcfkvdttp
      301 lkvqnstsle tptfiydqar tktnnynadk glsyygpyds vtfdikkpdv laichkanrg
      361 sftkflhdlk dglpnsnyfk kgllrkyelq dvdyniqels gysldeylki irtefsdrpn
      421 laiieipeqf kklpdsenpy ykikakllsl eipvqfirss nikkydqnll nsvalqiyak
      481 lggtpwvlpa qgsvdreivi gighswlrsn qfrgaesdrv vgittfmsgd gqyllgdkvk
      541 dvpyeryfee llislkdsik rlseeyawqe gdtvrlifhi fkpirnvefe vvsklvqeis
      601 qfkikfafvt iskghpsiif dasqqgisky gsntvigkyi plrgsnifid eetslvqmlg
      661 akelktskhg mstpiqirir kpqgnyenpe lkgmlfhdln yitqqiysft ylswrsflpr
      721 edpatmlysn lishllgkmr nvpewdadkl nyslkrkkwf l
//
LOCUS       WP_235954610             697 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Sphingobium
            psychrophilum].
ACCESSION   WP_235954610
VERSION     WP_235954610.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium psychrophilum
  ORGANISM  Sphingobium psychrophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (residues 1 to 697)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Sphingobium psychrophilum"
                     /db_xref="taxon:2728834"
     Protein         1..697
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=74715
     Region          3..697
                     /region_name="PRK13486"
                     /note="TonB-dependent receptor"
                     /db_xref="CDD:139606"
ORIGIN      
        1 mrlrvsalal vaglspclal aqapvgtddq snaivvtaag yaqdiveapa sitvlrreel
       61 qekrfgslae alqdvqgvdv ggeagktggl nisirgmpsd ytlvlidgrr qnapggvtpn
      121 gfgetstsfl ppfsaieqie vvrgpmstly gsdamggvvn iitrkvgdrw vgtataesti
      181 qgddrfgniq singfaqgpv idnlvgltlr gsvfhregsd ipipgdpalt lgrnpvrsdi
      241 ytyggrltft phadhdlwie ydrneqsydn segrlgtlgs ggyapeqqfn rsnyvlahsw
      301 rlgfgqldtt ltrndtetig rliptgtpga tpgsartlea rndivdsrfa gkvgalaftv
      361 ggqywkarmv egvapepftf tqwagfaeat wtivdgfnlt ggaryddhst fgskwspray
      421 avwnindavt vkggvsrgfk tprveqiaeg iigfggqgri pligtpgltp etstsyeagf
      481 yydghgffsg nitvfnndfd dkiatgpgip ncqfagnpdr pgcldvgpfp tvdllgqsin
      541 idkartrgve vaarfaftss lslsanytys eseqlsgaee glplvgmpkh mlngnlrwkl
      601 gekasvwara eirssryrgn naqqsavgdf rgyelfhigg syqiapafrl aatvnnifdt
      661 dyaeyvsyqs gaatvftpay sinqegrrlw lsatvdf
//
LOCUS       WP_235954652             384 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Cyclobacterium salsum].
ACCESSION   WP_235954652
VERSION     WP_235954652.1
KEYWORDS    RefSeq.
SOURCE      Cyclobacterium salsum
  ORGANISM  Cyclobacterium salsum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Cyclobacterium.
REFERENCE   1  (residues 1 to 384)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016777.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04909.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Cyclobacterium salsum"
                     /db_xref="taxon:2666329"
     Protein         1..384
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=44255
     Region          52..379
                     /region_name="LigW"
                     /note="5-carboxyvanillate decarboxylase LigW (lignin
                     degradation), amidohydro domain [Carbohydrate transport
                     and metabolism]; COG2159"
                     /db_xref="CDD:441762"
ORIGIN      
        1 mkiitkigkp fvfsfclftl afccqspksn netpeimees yysledfdqi ekidahvhlr
       61 tdfdtvfirq aardkfrlln vsvytspnlt peaqedfslk ligefpdivs ygttfslegf
      121 tnndwesktl dyleksigrg aiavkvwkni gmelknerde lvmitdpafd silqllmekd
      181 itllghlgep kntwlpleem tvqgdrdyfr enpryhmyqf pdlpsyeeqi aardqllann
      241 pdlrfvgahl gsleydvnel akrldsfpnm avdmaerish lqhqavsnwe gvrdfiityq
      301 drllygtdlr agasdiqakg ltepeeiseh ahqvwlrhwq fftgdlemqv pkvtgtfkgl
      361 klpktvvdki yrtnaekwyp gilq
//
LOCUS       WP_235954702             161 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6702 family protein [Cyclobacterium salsum].
ACCESSION   WP_235954702
VERSION     WP_235954702.1
KEYWORDS    RefSeq.
SOURCE      Cyclobacterium salsum
  ORGANISM  Cyclobacterium salsum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Cyclobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042765.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20420.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Cyclobacterium salsum"
                     /db_xref="taxon:2666329"
     Protein         1..161
                     /product="DUF6702 family protein"
                     /calculated_mol_wt=18511
     Region          15..149
                     /region_name="DUF6702"
                     /note="Domain of unknown function (DUF6702); pfam20420"
                     /db_xref="CDD:466569"
ORIGIN      
        1 mnpitivisf wwlvhpfyis ltdmvyneen qtieiaqkif wddlevalsn asgtavefls
       61 pnqpekldsl iaryllahnq iliqtdtvrl hylghevege aawfymesek ipspaqitiy
      121 navliddfpe qqnivnfykn rkpkslltrk dkkggilnle d
//
LOCUS       WP_235954706             173 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Cyclobacterium salsum].
ACCESSION   WP_235954706
VERSION     WP_235954706.1
KEYWORDS    RefSeq.
SOURCE      Cyclobacterium salsum
  ORGANISM  Cyclobacterium salsum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Cyclobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024913.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13523.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Cyclobacterium salsum"
                     /db_xref="taxon:2666329"
     Protein         1..173
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /calculated_mol_wt=20567
     Region          19..155
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
ORIGIN      
        1 meakkhaavi rlraasindl elvnywetkq hvidcdpdge wnwelelnrd pewreqwiae
       61 lngkpigflq iidpyleeth ywppvqknkr aidiwigeen nmnkgygtki melaiercfq
      121 npevdgilid plrsntkahr fyerlgfefv eerkfdetac fvyelkrkss irr
//
LOCUS       WP_235954786             456 aa            linear   BCT 02-MAR-2025
DEFINITION  enolase C-terminal domain-like protein [Cyclobacterium salsum].
ACCESSION   WP_235954786
VERSION     WP_235954786.1
KEYWORDS    RefSeq.
SOURCE      Cyclobacterium salsum
  ORGANISM  Cyclobacterium salsum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Cyclobacterium.
REFERENCE   1  (residues 1 to 456)
  AUTHORS   Thoden,J.B., Taylor Ringia,E.A., Garrett,J.B., Gerlt,J.A.,
            Holden,H.M. and Rayment,I.
  TITLE     Evolution of enzymatic activity in the enolase superfamily:
            structural studies of the promiscuous o-succinylbenzoate synthase
            from Amycolatopsis
  JOURNAL   Biochemistry 43 (19), 5716-5727 (2004)
   PUBMED   15134446
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024771.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13378.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Cyclobacterium salsum"
                     /db_xref="taxon:2666329"
     Protein         1..456
                     /product="enolase C-terminal domain-like protein"
                     /calculated_mol_wt=50800
     Region          57..456
                     /region_name="enolase_like"
                     /note="Enolase-superfamily, characterized by the presence
                     of an enolate anion intermediate which is generated by
                     abstraction of the alpha-proton of the carboxylate
                     substrate by an active site residue and is stabilized by
                     coordination to the essential Mg2+ ion; cl40480"
                     /db_xref="CDD:477366"
     Site            order(264,290,316)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:238188"
     Site            order(339,393)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:238188"
ORIGIN      
        1 mklpnqklls nrrnvlkmla mgstaglfgl ldgkeasast lehekpayqk gaapvtitrv
       61 raittapgga nlvivkvets epglyglgca tftqraavvv paidiylnef csgrdvdnie
      121 diwmsayvss ywrngpvlnn alsgldqalw dikgkrakmp vyqllggrsr invdtyihas
      181 gktveeisde vqkfmdqgwr hvriqqggyg gtgtfgqvvp dfkaagyarq tdgysdqgey
      241 lrrvpkmfdh vrktcgekve llhdmheqve piqainmike leeyrpffie dpfspenmgw
      301 fkqlrattsv plamgelfnn inefrepmvn qlfdfirchi sqiggitpam kvarlgewfn
      361 vrtawhgpgd tspvghqann hinlavynfg iqegqffner vqevfpgtpl mengyfkvte
      421 qhglgidine keaakypirh ngmgtlrkgd gtiikp
//
LOCUS       WP_235954804             424 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Sphingobium psychrophilum].
ACCESSION   WP_235954804
VERSION     WP_235954804.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium psychrophilum
  ORGANISM  Sphingobium psychrophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (residues 1 to 424)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 424)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02771.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Sphingobium psychrophilum"
                     /db_xref="taxon:2728834"
     Protein         1..424
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=44742
     Region          34..404
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(109,138,140,159,161,389..392,394,396)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mslyvhedgg epimpvemmq thsrvaqvtd pvrvaaslrp llerhaddce rqrrivapvm
       61 aalqesglfh itaprraggp ghrlithiet vaelakgcvg tawaygllsg itgtalalpp
      121 satellfrsg delfcsasal tgkavavagg yrvsgrwgyg sgclhadwal ngvmvdtaqg
      181 geaamafldl rdaacriedn whvagmagsg snmivaedlf vpdalilwtg rapsadlllt
      241 magleprdrw pmeplfplgv lapmlgaasa llegvtqama grpvvgwtya sqagseglvg
      301 lmgraameid sawlhirraa allddsaqqr vltgydkaqi qadcgyamel lraagnrlmd
      361 vagpsafala splqriwrdl nvgtrhnaln aplsielygr aiagmpsnir llpdiapapa
      421 wata
//
LOCUS       WP_235954812             229 aa            linear   BCT 02-MAR-2025
DEFINITION  N-6 DNA methylase [Cyclobacterium salsum].
ACCESSION   WP_235954812
VERSION     WP_235954812.1
KEYWORDS    RefSeq.
SOURCE      Cyclobacterium salsum
  ORGANISM  Cyclobacterium salsum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Cyclobacterium.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Schouler,C., Gautier,M., Ehrlich,S.D. and Chopin,M.C.
  TITLE     Combinational variation of restriction modification specificities
            in Lactococcus lactis
  JOURNAL   Mol Microbiol 28 (1), 169-178 (1998)
   PUBMED   9593305
REFERENCE   2  (residues 1 to 229)
  AUTHORS   Schouler,C., Clier,F., Lerayer,A.L., Ehrlich,S.D. and Chopin,M.C.
  TITLE     A type IC restriction-modification system in Lactococcus lactis
  JOURNAL   J Bacteriol 180 (2), 407-411 (1998)
   PUBMED   9440532
REFERENCE   3  (residues 1 to 229)
  AUTHORS   Thorpe,P.H., Ternent,D. and Murray,N.E.
  TITLE     The specificity of sty SKI, a type I restriction enzyme, implies a
            structure with rotational symmetry
  JOURNAL   Nucleic Acids Res 25 (9), 1694-1700 (1997)
   PUBMED   9108149
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02384.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Cyclobacterium salsum"
                     /db_xref="taxon:2666329"
     Protein         1..229
                     /product="N-6 DNA methylase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=26092
     Region          3..154
                     /region_name="HsdM_N"
                     /note="HsdM N-terminal domain; pfam12161"
                     /db_xref="CDD:463478"
     Region          166..>229
                     /region_name="HsdM"
                     /note="Type I restriction-modification system, DNA
                     methylase subunit [Defense mechanisms]; COG0286"
                     /db_xref="CDD:440055"
ORIGIN      
        1 mfeqtfknid dilhkdagcg seldyveqts wvlflkyldd lerdrataae ltgktytpii
       61 epeyqwsiwa apklqrarls ksgsvtepve vdhnaltgdd lidfvngklf pylskfklsa
      121 enadtieyki geifselknr vqsgynlrev inridelrfr thaekhemsh lyedkiknmg
      181 nagrnggeyy tprplittiv kvvdpkigek nydaacgsag flfeayeyl
//
LOCUS       WP_235954676             567 aa            linear   BCT 02-MAR-2025
DEFINITION  BamA/TamA family outer membrane protein [Cyclobacterium salsum].
ACCESSION   WP_235954676
VERSION     WP_235954676.1
KEYWORDS    RefSeq.
SOURCE      Cyclobacterium salsum
  ORGANISM  Cyclobacterium salsum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Cyclobacterium.
REFERENCE   1  (residues 1 to 567)
  AUTHORS   Heinz,E. and Lithgow,T.
  TITLE     A comprehensive analysis of the Omp85/TpsB protein superfamily
            structural diversity, taxonomic occurrence, and evolution
  JOURNAL   Front Microbiol 5, 370 (2014)
   PUBMED   25101071
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013283.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01103.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Cyclobacterium salsum"
                     /db_xref="taxon:2666329"
     Protein         1..567
                     /product="BamA/TamA family outer membrane protein"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /calculated_mol_wt=64808
     Region          <47..567
                     /region_name="BamA"
                     /note="Outer membrane protein assembly factor BamA [Cell
                     wall/membrane/envelope biogenesis]; COG4775"
                     /db_xref="CDD:443807"
ORIGIN      
        1 mltglvlstq aqdssyklsl eisengrllq hmehtfpdsl aiydhtkrli dslqwqgyln
       61 vedslvflte rkahllletg pefywlylek gnlepwmlgs aafsrihfqe rpfrfgevrr
      121 lieevletgq nqgypfiavn ldslrvgekq vgarikvnkg pwiafdtlqi tgssrtqply
      181 larklkvlpg epfsqkkldq avsrlgnipy vrldgspels fqneeatvyl pvndrkintl
      241 dgiigllpne veankwlvtg qfdvqlynvs gkgrdyllnw qrlsqysqnl tiearepfvl
      301 gsqldlglaf sflkedttfl nrefnvtigl qlspkvdlsf fgkreagdll dvsryeeane
      361 lpdiadfryn nyganlrfnd vddvlmpkng wrgsfmagig nkklventgl pqalyaeaek
      421 ntiqyylqgn veryirwrrk lstklalngg emhnsnlfln dlfrlgglqs irgfnenyfy
      481 asrylyftve pryyisdesy fllfsdlgrl enkvtrrpae wpmafgggls letnggiftf
      541 vyalgqasdq pigfsysrih fgftgrf
//
LOCUS       WP_235954890             149 aa            linear   BCT 02-MAR-2025
DEFINITION  addiction module protein [Cyclobacterium salsum].
ACCESSION   WP_235954890
VERSION     WP_235954890.1
KEYWORDS    RefSeq.
SOURCE      Cyclobacterium salsum
  ORGANISM  Cyclobacterium salsum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Cyclobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021253.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09720.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Cyclobacterium salsum"
                     /db_xref="taxon:2666329"
     Protein         1..149
                     /product="addiction module protein"
                     /calculated_mol_wt=16981
ORIGIN      
        1 mdvksvkidl ihwltelqdi svleklqglk eaqessfels aeqnkeldsr lgkyetgdmk
       61 fsswekvkeg viimgaidik qelrtlieke ndlhvleaik tllikssldp vlkekltsra
      121 lkaeedirag svytreeler klddsprkk
//
LOCUS       WP_235954906            2074 aa            linear   BCT 02-MAR-2025
DEFINITION  MBG domain-containing protein, partial [Cyclobacterium salsum].
ACCESSION   WP_235954906
VERSION     WP_235954906.1
KEYWORDS    RefSeq.
SOURCE      Cyclobacterium salsum
  ORGANISM  Cyclobacterium salsum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Cyclobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037085.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18676.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..2074
                     /organism="Cyclobacterium salsum"
                     /db_xref="taxon:2666329"
     Protein         1..>2074
                     /product="MBG domain-containing protein"
     Region          329..1993
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          1388..1461
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          1467..1540
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          1554..1619
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          1633..1698
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          1712..1777
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          1783..1856
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          1862..1935
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          1941..2014
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          2028..>2074
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
ORIGIN      
        1 mklllknfll iallffsclp ikaqtttvtf neitnylgtf getydngglr fsvtkepnat
       61 lnsgikaten dgflgsvaln dsnlapngik qwsirksdgs sfqfisiflq eggvgastsg
      121 tisafkggsq igssksidfn sasnglktfd ndpdfydvde irinaddiyf fldhvstgpp
      181 fspldedppv vtgitlngvp attaesvtft vnfsktalnv slddflltta gttgnlaais
      241 gtgnsyqvtv daisgegsir ldlkagtdis nedntsgvpa ftsggthmvs acftenmens
      301 pdassnfssn glsfslgtgl eteqrlgfga gnsdgfiknn ntagsfsiss sepftmnsvd
      361 lflsdlsngd nptgngtltv tgknngntif tiiktsgfpv nstqnggfft ldfstdgpqn
      421 frnanvdeve fsiadgflel lidnfnfcee vpdtdtaapa vqrilldgsp nstassivyt
      481 ivfdedafnl slddfslvat gtatgtlaqi sgsgstyqae itgisgegtl qlqlkggtdi
      541 adalgntspl eyvngqihlv gscssesfed esdgassfsg ngkdfslsgs wavkhrvgfg
      601 angsakyles sgsgpytlqv sgtpvavskl glylssfesg isptddgslt itgkrdgntl
      661 ytlektsgfp sdfggtggff tldfatdgls dysavlvdel vletggafly laldnfdfcv
      721 dnsapsgysv tidqnvidea nqdqvgftfa gaelestytf sfnssgggta vtgsgtilst
      781 tqqvtgidls svpnglitlt valtdisgnq gpevtaqadk fintipevgp dlytaptyee
      841 naanllilen ievsdadgde lvraivrfeg sgkisgdels lgdpspftiq eidvntlelt
      901 gtgtatvltd ilrglafrst sedptlggte teriisiiie denggfstpa ngthnvrlpi
      961 eavndapels lpsnqevlsn qplalsnagg ngitvsdpda gsnallveis vtngsldlat
     1021 ttglsfnlgt gagnssmqfs gdltainnal dgleftstts fvgeavltve indqgnigig
     1081 gslsanssls iqvnapnapp vasgvsasgt tavgesltga ytytdtenda esgssfqwwi
     1141 addavgsnet aisgesgqdl tlltdylghf isfevtpsdg nnsgapvksg yigpvftlpq
     1201 vnttdpagil fnaatlggev eneqfsevte sgivlntsgi pdltdqkvnm gsgpgafsas
     1261 vsnlapktty yvrafatnaa gtafgqqasf ttekqtltlg gsfqvenkty dgtsqavilt
     1321 ddlellspqp gdevmisdvv lafadsqsgt dkpvsivsav lsgadaenyt ltitaapsgi
     1381 asifpksltv sategiakty gtsdptftft ssgfvngede tlitgalgre pgenvgtyai
     1441 tqgdltagan ytlnftaanf tinpqtlvvt tdagqsktyg qadpvftfts sgfvngddes
     1501 lltgtlnret genvgayait qgdltagany tldftaadft inpqtlvlia dagqsktygq
     1561 adpvftftss gfvngddesl ltgvlsrepg envgtyaitq gdltaganyt ldftaadfti
     1621 npqtlvlatd agqsktygqa dpvftftssg fvngedesll tgglnrepge nvgayaitqg
     1681 dlsaganytl dftaadftin pqtlalttda gqskiygqtd pvftftssgf vngddesllt
     1741 gtlnrepgen vgsyairqgn lsaganyald ftaadfsinp ktlvltadag qsktygqadp
     1801 vftftssgfv ngedesllsg tlnrepgenv gsyaitqgdl taganytldf taadftinpk
     1861 tlvltadagq sktygqadpv ftftssgfvn gdgeslltga lnrepgenvg ayaitqgdvs
     1921 asanynldft aadftinpqn lvltadagqs ktygqtdpvf tftssgfvng ddeslltgtl
     1981 nrepgenvga yaitqgdlta ganytldfta adftinpqtl vlttdagqsk iygqadpvft
     2041 ftssgfvnge deslltgals repgenvgsy airq
//
LOCUS       WP_235954974             282 aa            linear   BCT 02-MAR-2025
DEFINITION  urease accessory protein UreD [Sphingobium psychrophilum].
ACCESSION   WP_235954974
VERSION     WP_235954974.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium psychrophilum
  ORGANISM  Sphingobium psychrophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (residues 1 to 282)
  AUTHORS   Farrugia,M.A., Wang,B., Feig,M. and Hausinger,R.P.
  TITLE     Mutational and Computational Evidence That a Nickel-Transfer Tunnel
            in UreD Is Used for Activation of Klebsiella aerogenes Urease
  JOURNAL   Biochemistry 54 (41), 6392-6401 (2015)
   PUBMED   26401965
REFERENCE   2  (residues 1 to 282)
  AUTHORS   Farrugia,M.A., Macomber,L. and Hausinger,R.P.
  TITLE     Biosynthesis of the urease metallocenter
  JOURNAL   J Biol Chem 288 (19), 13178-13185 (2013)
   PUBMED   23539618
REFERENCE   3  (residues 1 to 282)
  AUTHORS   Moncrief,M.B. and Hausinger,R.P.
  TITLE     Characterization of UreG, identification of a UreD-UreF-UreG
            complex, and evidence suggesting that a nucleotide-binding site in
            UreG is required for in vivo metallocenter assembly of Klebsiella
            aerogenes urease
  JOURNAL   J Bacteriol 179 (13), 4081-4086 (1997)
   PUBMED   9209019
REFERENCE   4  (residues 1 to 282)
  AUTHORS   Neyrolles,O., Ferris,S., Behbahani,N., Montagnier,L. and
            Blanchard,A.
  TITLE     Organization of Ureaplasma urealyticum urease gene cluster and
            expression in a suppressor strain of Escherichia coli
  JOURNAL   J Bacteriol 178 (3), 647-655 (1996)
   PUBMED   8550495
  REMARK    Erratum:[J Bacteriol. 1996 May;178(9):2725. doi:
            10.1128/jb.178.9.2725-2725.1996.. PMID: 8626347]
REFERENCE   5  (residues 1 to 282)
  AUTHORS   Park,I.S., Carr,M.B. and Hausinger,R.P.
  TITLE     In vitro activation of urease apoprotein and role of UreD as a
            chaperone required for nickel metallocenter assembly
  JOURNAL   Proc Natl Acad Sci U S A 91 (8), 3233-3237 (1994)
   PUBMED   7909161
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10002853
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Sphingobium psychrophilum"
                     /db_xref="taxon:2728834"
     Protein         1..282
                     /product="urease accessory protein UreD"
                     /GO_function="GO:0016151 - nickel cation binding [Evidence
                     IEA]"
                     /GO_process="GO:0008152 - metabolic process [Evidence
                     IEA]"
                     /calculated_mol_wt=30152
     Region          5..279
                     /region_name="UreH"
                     /note="Urease accessory protein UreH [Posttranslational
                     modification, protein turnover, chaperones]; COG0829"
                     /db_xref="CDD:440591"
ORIGIN      
        1 mtvqraitvp pksrhqrvdg ramvafsprg irdmmqvapa rllfpegreg dfplavtvtt
       61 sggltggdrl aldiivdpga aativpqaae klyraldede ptridtriti gagatcewla
      121 qeailfdrsr mrrtleanla pdarmlamem lvlgrgamge vyasglihda wrirrdgrlv
      181 wadtlhvegd faaqgrapfg fgdataiatl vyagpdagdy ldlarslfeg pgagatsfdg
      241 llilrltaad pqalrkdvmr aagilraaif glsptmptic yc
//
LOCUS       WP_235955025             150 aa            linear   BCT 02-MAR-2025
DEFINITION  integrase arm-type DNA-binding domain-containing protein
            [Sphingobium psychrophilum].
ACCESSION   WP_235955025
VERSION     WP_235955025.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium psychrophilum
  ORGANISM  Sphingobium psychrophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024750.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13356.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Sphingobium psychrophilum"
                     /db_xref="taxon:2728834"
     Protein         1..150
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /calculated_mol_wt=16485
     Region          19..>136
                     /region_name="FimB"
                     /note="Integrase/recombinase, includes phage integrase
                     [Replication, recombination and repair, Mobilome:
                     prophages, transposons]; COG0582"
                     /db_xref="CDD:440347"
ORIGIN      
        1 mvvflmvpes pfgagtimal nhiqitnakp rdkayklada dglylavqtn gtklwrmnyr
       61 ylgrqktlyf gawpevgiam arqqraaare qiaagldpaa ekrsdtlark vaadntfkti
      121 aeewvaknel egarrssstr fagslawpip
//
LOCUS       WP_235954667             464 aa            linear   BCT 02-MAR-2025
DEFINITION  Ca2+-dependent phosphoinositide-specific phospholipase C
            [Cyclobacterium salsum].
ACCESSION   WP_235954667
VERSION     WP_235954667.1
KEYWORDS    RefSeq.
SOURCE      Cyclobacterium salsum
  ORGANISM  Cyclobacterium salsum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Cyclobacterium.
REFERENCE   1  (residues 1 to 464)
  AUTHORS   Weinstein,H. and Scarlata,S.
  TITLE     The correlation between multidomain enzymes and multiple activation
            mechanisms--the case of phospholipase Cbeta and its membrane
            interactions
  JOURNAL   Biochim Biophys Acta 1808 (12), 2940-2947 (2011)
   PUBMED   21906583
REFERENCE   2  (residues 1 to 464)
  AUTHORS   Essen,L.O., Perisic,O., Cheung,R., Katan,M. and Williams,R.L.
  TITLE     Crystal structure of a mammalian phosphoinositide-specific
            phospholipase C delta
  JOURNAL   Nature 380 (6575), 595-602 (1996)
   PUBMED   8602259
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027980.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16670.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Cyclobacterium salsum"
                     /db_xref="taxon:2666329"
     Protein         1..464
                     /product="Ca2+-dependent phosphoinositide-specific
                     phospholipase C"
                     /EC_number="3.1.4.11"
                     /calculated_mol_wt=52539
     Region          14..342
                     /region_name="PI-PLC-C1"
                     /note="Phosphoinositide phospholipase C, Ca2+-dependent;
                     pfam16670"
                     /db_xref="CDD:435502"
     Site            order(25,72,151,226,231,233,263,265)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176531"
     Site            order(25,113)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176531"
     Site            order(26,70,72,151)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:176531"
     Region          359..464
                     /region_name="PspE"
                     /note="Rhodanese-related sulfurtransferase [Inorganic ion
                     transport and metabolism]; COG0607"
                     /db_xref="CDD:440372"
ORIGIN      
        1 macgqkpske pnslkinhlq ligshnsykl pippkimeai essdpdlats ldyshpsvwe
       61 qlsmglrlle ldvfrdpegg rfseplgqay meeavmdsar kaafeqpgfk vfhvqdidfr
      121 shyplledyl telktwsslh pdhlpvfitv nakdanyper qmtaalpfgn nafleldeli
      181 rqvlgeekli ipkeiigtha dlktaiaesg wpdiqdlrgk fiwildekge kldaylsrre
      241 gsreplffvn vpethpmagi hilndpigqq eaikalvekg ylvrtradae trearandrk
      301 rmeaafesga qlistdyyrp dprfeggyqv ifpddsyqri npffsrdkkl sevleepndq
      361 vialgpqtfq yasqrekpll ldvrtqaevd egmitgaahi dfmqadfsqr ieklekgqpv
      421 fvyckvggrs skaaeqmrem gfekvyhleg gldewkalgl pvsr
//
LOCUS       WP_235955060             157 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail length tape measure family protein [Sphingobium
            psychrophilum].
ACCESSION   WP_235955060
VERSION     WP_235955060.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium psychrophilum
  ORGANISM  Sphingobium psychrophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Pedersen,M., Ostergaard,S., Bresciani,J. and Vogensen,F.K.
  TITLE     Mutational analysis of two structural genes of the temperate
            lactococcal bacteriophage TP901-1 involved in tail length
            determination and baseplate assembly
  JOURNAL   Virology 276 (2), 315-328 (2000)
   PUBMED   11040123
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06791.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Sphingobium psychrophilum"
                     /db_xref="taxon:2728834"
     Protein         1..157
                     /product="phage tail length tape measure family protein"
                     /calculated_mol_wt=16278
     Region          51..>109
                     /region_name="TMP_2"
                     /note="Prophage tail length tape measure protein;
                     pfam06791"
                     /db_xref="CDD:429120"
ORIGIN      
        1 msgtplelia vevradigql eremtgavrv vdrgmsnlen stiraertvv rsagamanaq
       61 rnlgrqfadv gaqlasgssp flilaqqapq vadaladtgg kaareagdvg vvhvvtpqga
      121 deiggiytgd kwalltgkgl afvrlpesnv iavwrrg
//
LOCUS       WP_235955080             123 aa            linear   BCT 02-MAR-2025
DEFINITION  mercuric transporter MerT family protein [Sphingobium
            psychrophilum].
ACCESSION   WP_235955080
VERSION     WP_235955080.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium psychrophilum
  ORGANISM  Sphingobium psychrophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (residues 1 to 123)
  AUTHORS   Reniero,D., Mozzon,E., Galli,E. and Barbieri,P.
  TITLE     Two aberrant mercury resistance transposons in the Pseudomonas
            stutzeri plasmid pPB
  JOURNAL   Gene 208 (1), 37-42 (1998)
   PUBMED   9479042
REFERENCE   2  (residues 1 to 123)
  AUTHORS   Kholodii,G.Y., Yurieva,O.V., Gorlenko,Z.M., Mindlin,S.Z.,
            Bass,I.A., Lomovskay,O.L., Kopteva,A.V. and Nikiforov,V.G.
  TITLE     Tn5041: a chimeric mercury resistance transposon closely related to
            the toluene degradative transposon Tn4651
  JOURNAL   Microbiology (Reading) 143 (Pt 8), 2549-2556 (1997)
   PUBMED   9274008
REFERENCE   3  (residues 1 to 123)
  AUTHORS   Yurieva,O., Kholodii,G., Minakhin,L., Gorlenko,Z., Kalyaeva,E.,
            Mindlin,S. and Nikiforov,V.
  TITLE     Intercontinental spread of promiscuous mercury-resistance
            transposons in environmental bacteria
  JOURNAL   Mol Microbiol 24 (2), 321-329 (1997)
   PUBMED   9159519
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014465.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02411.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Sphingobium psychrophilum"
                     /db_xref="taxon:2728834"
     Protein         1..123
                     /product="mercuric transporter MerT family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=12475
     Region          2..123
                     /region_name="MerT"
                     /note="MerT mercuric transport protein; cl03578"
                     /db_xref="CDD:186578"
ORIGIN      
        1 mmskpyvlgr fssargalll afgatasafg vasccalpil lttvgvsvgw lggiavaaap
       61 yrtlllglsa lclvggaiml wrqqrvamtc gpegactppa lrvvvfvglt igaillwlgy
      121 syv
//
LOCUS       WP_235955112              78 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: SDR family oxidoreductase [Sphingobium].
ACCESSION   WP_235955112
VERSION     WP_235955112.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium
  ORGANISM  Sphingobium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Sphingobium"
                     /db_xref="taxon:165695"
     Protein         1..78
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=8163
     Region          <42..78
                     /region_name="FabG-like"
                     /note="SDR family oxidoreductase; PRK07231"
                     /db_xref="CDD:235975"
ORIGIN      
        1 maargfiaan wpntrtahlr pcrdqrialq inglaidlaa fgrlgkpeei adavlwmstd
       61 lgafvtgasi svdggrsl
//
LOCUS       WP_235955147             233 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Sphingobium psychrophilum].
ACCESSION   WP_235955147
VERSION     WP_235955147.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium psychrophilum
  ORGANISM  Sphingobium psychrophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02371.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Sphingobium psychrophilum"
                     /db_xref="taxon:2728834"
     Protein         1..233
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=25673
     Region          <74..195
                     /region_name="COG3547"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442768"
ORIGIN      
        1 mtpgicprrl alfdfyqtkv lecdrkleva lkaleidegy dvrqlpkvrt krrqvntpdf
       61 evrsalyrvl gvdltqihgi gpslalklvg ecgtdlaawp sskhftswlc lapgnkisgg
      121 kllssktrrs ssraaallrl aattigrsdt algafyrrls aragkakavt atarkiavlf
      181 ynslrhgmay hdlgatqyee ryrsrvignl krrakafgfs lqevpsepem svs
//
LOCUS       WP_235955159             294 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Sphingobium
            psychrophilum].
ACCESSION   WP_235955159
VERSION     WP_235955159.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium psychrophilum
  ORGANISM  Sphingobium psychrophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020897.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09339.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Sphingobium psychrophilum"
                     /db_xref="taxon:2728834"
     Protein         1..294
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=32280
     Region          30..288
                     /region_name="PRK09834"
                     /note="DNA-binding transcriptional regulator"
                     /db_xref="CDD:182100"
ORIGIN      
        1 mstpqpfpdl svrriknscv ppalchdpvm ekgvpirsls rgiavlqavn rggtismmei
       61 artsnvpypt acrivqtlmh eglierepsr khyrptalvq tlahgfqgha rlvqaarphi
      121 veltrkvgwp islashvghs miirdsthsl ttltfsnyyp gyalpileca agiaylsylp
      181 ederhdliaa lklmpgattn hiidlfennn laqevrakgh ttrafntftr npgktsslav
      241 pvidqnnlvi gtltlaffvn aikmhdavhq flqpmqttae viandlhrgn ptpt
//
LOCUS       WP_235955179             280 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3667 domain-containing protein [Sphingobium psychrophilum].
ACCESSION   WP_235955179
VERSION     WP_235955179.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium psychrophilum
  ORGANISM  Sphingobium psychrophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12412.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Sphingobium psychrophilum"
                     /db_xref="taxon:2728834"
     Protein         1..280
                     /product="DUF3667 domain-containing protein"
                     /calculated_mol_wt=31869
     Region          82..>109
                     /region_name="DUF3667"
                     /note="Protein of unknown function (DUF3667); pfam12412"
                     /db_xref="CDD:432535"
ORIGIN      
        1 mlnirrkiae tlgmkastat aipdgpvsdd wfgrdvcrnc gaatptpycg qcgqkaahrf
       61 vwrdirnesw drirlfeiqs vrtlgrlffs pgtvareyvl grraahmhpl klllalvail
      121 vlllaanqyf ghysyagrdv vvdrmaqrvm afanwsfslg ilaifaggwi vlgrrlgynv
      181 ieqailaiyc qsiilaliii nllptliwrs pefilwhksa sqyyvpmfkl livavayrqf
      241 flieiksdwl klfsacliya tinwvllriy afgifwlvsr
//
LOCUS       WP_235955182              70 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6771 family protein [Sphingobium].
ACCESSION   WP_235955182
VERSION     WP_235955182.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium
  ORGANISM  Sphingobium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042602.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20561.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Sphingobium"
                     /db_xref="taxon:165695"
     Protein         1..70
                     /product="DUF6771 family protein"
                     /calculated_mol_wt=7664
     Region          8..70
                     /region_name="DUF6771"
                     /note="Domain of unknown function (DUF6771); pfam20561"
                     /db_xref="CDD:466710"
ORIGIN      
        1 mfftiatmih pdslwlaqsl lhapawarva ltapnerlre kaavelaqsv iaaiehppni
       61 pdirqmtlpl
//
LOCUS       WP_235955233             149 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: cellulose biosynthesis protein BcsD [Sphingobium].
ACCESSION   WP_235955233
VERSION     WP_235955233.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium
  ORGANISM  Sphingobium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015464.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03500.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Sphingobium"
                     /db_xref="taxon:165695"
     gene            1..149
                     /gene="bcsD"
     Protein         1..149
                     /product="cellulose biosynthesis protein BcsD"
                     /GO_process="GO:0030244 - cellulose biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=16114
ORIGIN      
        1 metpiaapha pdvaglsllt altaseifks ataaqargfy vavgkriasl apvedisdld
       61 altqrinrvw hamhwgeasl smddegiivh hhgmpdaleg dleghwpdvk nailegaydg
      121 wfrtlgsgpq lktwivhthe gqielrhgr
//
LOCUS       WP_235955272             650 aa            linear   BCT 02-MAR-2025
DEFINITION  FTR1 family protein [Sphingobium psychrophilum].
ACCESSION   WP_235955272
VERSION     WP_235955272.1
KEYWORDS    RefSeq.
SOURCE      Sphingobium psychrophilum
  ORGANISM  Sphingobium psychrophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (residues 1 to 650)
  AUTHORS   Stearman,R., Yuan,D.S., Yamaguchi-Iwai,Y., Klausner,R.D. and
            Dancis,A.
  TITLE     A permease-oxidase complex involved in high-affinity iron uptake in
            yeast
  JOURNAL   Science 271 (5255), 1552-1557 (1996)
   PUBMED   8599111
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015213.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03239.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Sphingobium psychrophilum"
                     /db_xref="taxon:2728834"
     Protein         1..650
                     /product="FTR1 family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_component="GO:0033573 - high-affinity iron permease
                     complex [Evidence IEA]"
                     /GO_function="GO:0005381 - iron ion transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0034755 - iron ion transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=68557
     Region          <120..229
                     /region_name="TsdA"
                     /note="Thiosulfate dehydrogenase TsdA, contains C-terminal
                     cytochrome c domain [Inorganic ion transport and
                     metabolism]; COG3258"
                     /db_xref="CDD:442489"
     Region          388..645
                     /region_name="FTR1"
                     /note="High-affinity Fe2+/Pb2+ permease [Inorganic ion
                     transport and metabolism]; COG0672"
                     /db_xref="CDD:440436"
ORIGIN      
        1 msrnrdthcp ltlgllavaa lsimslatpa vaqtapaqta wrlldyiavd ypeavadgki
       61 anageyaemq efsataakli gelptssara glerqagnlq riitakapap aiataargla
      121 adlikaypvp laptaapdla rgkalyaqhc aschgatgkg dgpqargldp apiafadear
      181 arersvfaly qvieqgldgt smvsfadlpp qdrwalafya gsiaypesea gkalwdgdad
      241 lrkrldlekl vgttpaalgt qvgddkarql maylrhhpea tiaveaagtl vlarsrldda
      301 laaygrgdrk tatdlalsay ldgfepveav lsardnalmv riegamadlr agiakgepva
      361 tvkdhvatld glfadaetal apseasatss fvaaftilar egleallivv amiaflskad
      421 rrdmlpyvhg gwvaalvaga atwaaatwli aisgasrelt egfggvfaai vllwvgiwmh
      481 gksnadawqr yirdtlskal nrrsawflfl lafivvyrev fetilfyaai weqgnggavi
      541 agavaavvll aviafvmmry srtlpigkff ayssaliavl avvligkgsa alqeagylpv
      601 tpwpglprse llgiyptret ivaqlvmval lvagflwnrr saaktegtpa
//
LOCUS       WP_235955330            1375 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Hymenobacter artigasi].
ACCESSION   WP_235955330
VERSION     WP_235955330.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter artigasi
  ORGANISM  Hymenobacter artigasi
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 1375)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1375
                     /organism="Hymenobacter artigasi"
                     /db_xref="taxon:2719616"
     Protein         1..1375
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=155296
     Region          79..419
                     /region_name="CpdA"
                     /note="3',5'-cyclic AMP phosphodiesterase CpdA [Signal
                     transduction mechanisms]; COG1409"
                     /db_xref="CDD:441019"
     Region          <1009..1345
                     /region_name="BamA"
                     /note="Outer membrane protein assembly factor BamA [Cell
                     wall/membrane/envelope biogenesis]; COG4775"
                     /db_xref="CDD:443807"
ORIGIN      
        1 myllrrftfl lacclplvat aqqaalktpk apkeprgtqr elpepgesdq nphtsrpnyr
       61 kagvnwernm ppdstriryr vfligdvgnp ipvakggeps lnflrqqimk agknsttifl
      121 gdnvynygmp eegaydrkna eerltaqldi frgypgekym tpgnhdwiqg taggleqvnr
      181 eqafveqymr kdstafsytg dfflprdgcp gpfevrvqdd lvlialnsqw fltpptnrpf
      241 glngacgadn nddvfaalee iiarnkdkhi mvfahhplfs dgihggyftl adhifplsiv
      301 lkyafiplpv igsiypfark yggisqdiph pmyqayrkgl ldifakypnv vyaaghehnl
      361 qyytegnthf itsgsgcktq hvkpgdggga ifsdkekgfa vvnyyddgqv wseyfipqgn
      421 gqtarrvfrt pmyakttgti attpaeplse tvltttngqa ggqklpqtea aieekkkekk
      481 kkqqkaeaai akapipttrp dyrdssvtva inanydrhgg fhnwllgehy rkewatpvkf
      541 rtldlandkg glmpyktggg kqtaslkvrn eagynftlrg idkdpaavlp eqlrtglaka
      601 vlqdqisaqh pyasfvlppl gtaagilhtn pvpvyipqdp llgqyyaqfa nlpaaleeda
      661 kdsqdnvasl gfaknlvgte kmltrllddn dnqvnqkafa rsrlfdmwig dwdrhedqwr
      721 wsetkdkggd rtftavpedr diaffkgdgv lpyiisrrfa irnfqnfgyd yadykglnqt
      781 gmsndrvfms avtrqdwike adymkahltd eiiekafrdk wpkeiydlha keiiaklksr
      841 rdllpdvagk yadllaeive vrgskknekf tverltnrkt rvvmqkinkd gkltkilydr
      901 tfddavtdev rlygiagkdv ydvkgdvkrg vklriiagtg rdsittrdhv ggllhktqiy
      961 dadsgnvint ssearqrlep gyevsrydyp hrfdlkdyrl dyvgpalyfg yniddgvllg
     1021 ggvtyrhygf rrepysweqs itanfapara aynirytgqf trifrntdlh iaaqyygpql
     1081 lynffgignn tvnlatkden rgvvtnrsvn sayrvrfnrl tiaptferkl feflkfgigp
     1141 qydqfrieqd pigsvikdsl tnksgvttye nrrfgvrasd fqtnqylggl mylnldasss
     1201 aknpriglrw yneyqynwql nseslsfgrf stevrayltp nfpfhltyag rigyqhnfgd
     1261 yrfyqantlg gttnlrgyrr tryagrtavy anfeprlelf sfnaylfpgk fgvmgladig
     1321 rvysdndtgt ytglnafhsg fgggiyvdil kaaiinatys vgeeklvfvg fdflf
//
LOCUS       WP_235955372             491 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxypeptidase regulatory-like domain-containing protein
            [Hymenobacter artigasi].
ACCESSION   WP_235955372
VERSION     WP_235955372.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter artigasi
  ORGANISM  Hymenobacter artigasi
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13620.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Hymenobacter artigasi"
                     /db_xref="taxon:2719616"
     Protein         1..491
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /calculated_mol_wt=53191
     Region          23..99
                     /region_name="CarboxypepD_reg"
                     /note="Carboxypeptidase regulatory-like domain; pfam13620"
                     /db_xref="CDD:433354"
     Region          107..201
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(107,174,189)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(190..191,193..194)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          211..424
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
ORIGIN      
        1 micglgglis cqenlvepay ygtvtgtvrd grtnlplant svttnpatss yltdaagkfr
       61 ienapagrfa vtvskvdyqq vvtnvtvndg qtadvsivlt ksstaaptap nrptpanqat
      121 aqpttvllsw rpvgatasds lrydvalfes nnlnqrmllt nskdtavtat slrysttyyw
      181 qvtvrntagv targpiwsfq tvafptnryl fartvvgntd iysadgtatp vqltfgstve
      241 tapqlsptrd liaytsnatg lyqlytmnhd gsnprqittl dvdgynnrgv gyrwspdgay
      301 fiyahndkly rinrdgtgrm elatapagrn frecdwtaed gghlvvqtvg adifdselyi
      361 yntdgtnprl lvsnlpgrvd spsfsidglt vvytrdvtgf nsaagrqqda rifsrrtdgt
      421 gtpvdlssgt nnsgktlgtn dltphfapdg fhlifvnrtt devappevwt adldgrnrtr
      481 lftnaflpdy k
//
LOCUS       WP_235955395             161 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF305 domain-containing protein [Hymenobacter artigasi].
ACCESSION   WP_235955395
VERSION     WP_235955395.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter artigasi
  ORGANISM  Hymenobacter artigasi
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 161)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015658.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03713.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Hymenobacter artigasi"
                     /db_xref="taxon:2719616"
     Protein         1..161
                     /product="DUF305 domain-containing protein"
                     /calculated_mol_wt=18404
     Region          <17..>122
                     /region_name="DUF4481"
                     /note="Domain of unknown function (DUF4481); pfam14800"
                     /db_xref="CDD:464322"
     Region          92..158
                     /region_name="COG3544"
                     /note="Uncharacterized conserved protein, DUF305 family
                     [Function unknown]"
                     /db_xref="CDD:442765"
ORIGIN      
        1 mmnpttpatp apqghyrkfl ltmaisfvvm yvvmylntye ldhvyfsltr fymtvlmvtv
       61 mavvmllmmp mmypnkttng iimgasltlf vgalimvrsq tfvndtrwmk amiphhsiai
      121 ltseraniqd pevrkladdi isaqkreite mqamikrleq q
//
LOCUS       WP_235955422             829 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Hymenobacter artigasi].
ACCESSION   WP_235955422
VERSION     WP_235955422.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter artigasi
  ORGANISM  Hymenobacter artigasi
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 829)
  AUTHORS   Zhang,Y.L., Arakawa,E. and Leung,K.Y.
  TITLE     Novel Aeromonas hydrophila PPD134/91 genes involved in O-antigen
            and capsule biosynthesis
  JOURNAL   Infect Immun 70 (5), 2326-2335 (2002)
   PUBMED   11953367
  REMARK    Erratum:[Infect Immun 2002 Jun;70(6):3308]
REFERENCE   2  (residues 1 to 829)
  AUTHORS   Swartley,J.S., Liu,L.J., Miller,Y.K., Martin,L.E., Edupuganti,S.
            and Stephens,D.S.
  TITLE     Characterization of the gene cassette required for biosynthesis of
            the (alpha1-->6)-linked N-acetyl-D-mannosamine-1-phosphate capsule
            of serogroup A Neisseria meningitidis
  JOURNAL   J Bacteriol 180 (6), 1533-1539 (1998)
   PUBMED   9515923
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025025.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13641.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Hymenobacter artigasi"
                     /db_xref="taxon:2719616"
     Protein         1..829
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=91782
     Region          102..326
                     /region_name="CESA_CelA_like"
                     /note="CESA_CelA_like are involved in the elongation of
                     the glucan chain of cellulose; cd06421"
                     /db_xref="CDD:133043"
     Site            187..189
                     /site_type="active"
                     /note="DXD motif [active]"
                     /db_xref="CDD:133043"
     Region          <661..794
                     /region_name="Glyco_hydro_26"
                     /note="Glycosyl hydrolase family 26; cl21700"
                     /db_xref="CDD:473934"
ORIGIN      
        1 miyafqakns tistikpgpt hyrvtyqpia glatmrwlva agmacmfffl wwffttlrig
       61 yaplfwllai slgfkllrml hewvhyvqvr vpmppapaaa irrvdvltta cpgephgmii
      121 ktleamqair hphtsylcde gndpvlraac arlgvvhvtr vlkkdakagn innalrqatg
      181 eicvvldpdh vptpdfldqv lpyfddervg fvqvvqaygn qqeslvarga aeqtyhfygp
      241 lmmgmngygt vqaiganctf rraaldsigg haagltedmh tamrlhaagw qsvyvpkvvs
      301 rglvpaslaa yysqqlkwsr gafdllfrvy prlfgkftwa qrlhylllpl yffsgiiali
      361 dltlpvlslg lsqfpwlvgl delalhalpm lgmsllircy vqrwlrepge sglhlaggfl
      421 rigtwwvytl gfvyavlgvr vpylptpkeg rrdnewllal pnlllavlll lackygrvta
      481 ygfytntmvv lalvnvailv aaaalgqhea trnfirdmaa wpfrgvvlrl hrlqamlala
      541 lvprlrrfsq pvavaslviv gisyhvradw vaqdipewll tntqsmhvgq dinsteasmv
      601 gtfaamgltk svavdcdiaa lrielptass qlpalvsdla sqqkvpllsw pvsaatsrqp
      661 sywhhvarql revpgpvmlr pllsaptals yrrtwrdmve vfrregvrnv vwvwspeatd
      721 sllqrfpgva ytdwvagsll ngqgppygtl rpqmaqnlaf hqlpvllmap pqngasadva
      781 rlgwqypeik avvfaaptht ttptasrvsq sgqsiaassp flhtsqfly
//
LOCUS       WP_235955501             288 aa            linear   BCT 02-MAR-2025
DEFINITION  nitrilase-related carbon-nitrogen hydrolase [Hymenobacter
            artigasi].
ACCESSION   WP_235955501
VERSION     WP_235955501.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter artigasi
  ORGANISM  Hymenobacter artigasi
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 288)
  AUTHORS   Pace,H.C. and Brenner,C.
  TITLE     The nitrilase superfamily: classification, structure and function
  JOURNAL   Genome Biol 2 (1), REVIEWS0001 (2001)
   PUBMED   11380987
REFERENCE   2  (residues 1 to 288)
  AUTHORS   Bork,P. and Koonin,E.V.
  TITLE     A new family of carbon-nitrogen hydrolases
  JOURNAL   Protein Sci 3 (8), 1344-1346 (1994)
   PUBMED   7987228
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012993.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00795.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Hymenobacter artigasi"
                     /db_xref="taxon:2719616"
     Protein         1..288
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /GO_process="GO:0008152 - metabolic process [Evidence
                     IEA]"
                     /calculated_mol_wt=32712
     Region          3..288
                     /region_name="ML_beta-AS_like"
                     /note="mammalian-like beta-alanine synthase (beta-AS) and
                     similar proteins (class 5 nitrilases); cd07568"
                     /db_xref="CDD:143592"
     Site            order(53,126,130,137,163..164,166..167,188)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:143592"
     Site            order(53,126,163)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:143592"
     Site            order(62..65,67,70,101,105,107,115,117,119,121,127..129,
                     131..133,136,138..152,157,164,167..171,173..174,177..178,
                     191,193,195..197,199..201,203..204,207..208,241,265..266,
                     268..280,282..283,285..287)
                     /site_type="other"
                     /note="multimer interface [polypeptide binding]"
                     /db_xref="CDD:143592"
     Site            order(115,117,119,121,127..129,131..132,143..144,146..152,
                     157,164,167..171,173..174,177..178,191,193,195..197,
                     199..201,203..204,207..208,241,270..273,276..280,282..283,
                     285..287)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143592"
ORIGIN      
        1 mpriiksgli qmslpmtege gtiaeimaam eakhipliee agrqgvqilc lqeifntpyf
       61 cpgqdkawya saesvpgptt drmaeyakky nmvmivpvye reqagflynt aavidadgty
      121 lgkyrknhip httgfwekff fkpgnlgypv fqtkyakvgv yicydrhfpd garilglnga
      181 eivynpsatv aglsqylwkl eqpahaaang yfmgcinrvg eekpwnlgrf ygtsyfvdpr
      241 gqiiaqadey kdelliaefd ldmieevrnt wqffrdrrpe tyeklvel
//
LOCUS       WP_235955535             201 aa            linear   BCT 02-MAR-2025
DEFINITION  thermonuclease family protein [Hymenobacter artigasi].
ACCESSION   WP_235955535
VERSION     WP_235955535.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter artigasi
  ORGANISM  Hymenobacter artigasi
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 201)
  AUTHORS   Ponting,C.P.
  TITLE     P100, a transcriptional coactivator, is a human homologue of
            staphylococcal nuclease
  JOURNAL   Protein Sci 6 (2), 459-463 (1997)
   PUBMED   9041650
REFERENCE   2  (residues 1 to 201)
  AUTHORS   Callebaut,I. and Mornon,J.P.
  TITLE     The human EBNA-2 coactivator p100: multidomain organization and
            relationship to the staphylococcal nuclease fold and to the tudor
            protein involved in Drosophila melanogaster development
  JOURNAL   Biochem J 321 (Pt 1) (Pt 1), 125-132 (1997)
   PUBMED   9003410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012774.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00565.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Hymenobacter artigasi"
                     /db_xref="taxon:2719616"
     Protein         1..201
                     /product="thermonuclease family protein"
                     /calculated_mol_wt=21145
     Region          53..>148
                     /region_name="SNc"
                     /note="Staphylococcal nuclease homologues. SNase
                     homologues are found in bacteria, archaea, and eukaryotes.
                     They contain no disufide bonds; cl00140"
                     /db_xref="CDD:469627"
     Site            order(56,69,75,78,110..111,113)
                     /site_type="other"
                     /note="Catalytic site"
                     /db_xref="CDD:238102"
ORIGIN      
        1 mkvrqtilrv gemalvgalv agclssqret gaplsltara aaaaeaarvv rvidadtyim
       61 lsgsstfrlr llgvdapeqd qafgpqatds varllapgrv vlvaragldl ygrtlgavll
      121 ptatvaaagr avpldslmvv rgwawaidpn rtvagraqqq aaaqraglgl wkcgvsqavp
      181 pklwrsfnae ikrryrvgct w
//
LOCUS       WP_235955572             139 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF983 domain-containing protein [Hymenobacter artigasi].
ACCESSION   WP_235955572
VERSION     WP_235955572.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter artigasi
  ORGANISM  Hymenobacter artigasi
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017935.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06170.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Hymenobacter artigasi"
                     /db_xref="taxon:2719616"
     Protein         1..139
                     /product="DUF983 domain-containing protein"
                     /calculated_mol_wt=15472
     Region          23..122
                     /region_name="DUF983"
                     /note="Protein of unknown function (DUF983); cl02211"
                     /db_xref="CDD:470495"
ORIGIN      
        1 madpttdtye lvdstalala qlrcprchqg klftysalnl skfaqmpaqc pvcsqtfepe
       61 pgfyfgsmyi tfgfnvattl vlgvliyylm dnpdtwvyvs ivtavtvllt pvilrysral
      121 mlylfggtry npklarrge
//
LOCUS       WP_235955660             327 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2279 domain-containing protein [Hymenobacter artigasi].
ACCESSION   WP_235955660
VERSION     WP_235955660.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter artigasi
  ORGANISM  Hymenobacter artigasi
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021554.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10043.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Hymenobacter artigasi"
                     /db_xref="taxon:2719616"
     Protein         1..327
                     /product="DUF2279 domain-containing protein"
                     /calculated_mol_wt=36268
     Region          97..178
                     /region_name="DUF2279"
                     /note="Predicted periplasmic lipoprotein (DUF2279);
                     cl11574"
                     /db_xref="CDD:448313"
ORIGIN      
        1 mildllgrgr laglvlggal alplagrgqa plrtdsagsp pvpvartssr sdfpvdsvaq
       61 rkrrlrllvg gtalsygviy tglatawytg ervplhwfnd lpewqqldkc ghfwgafqes
      121 rgavdmlrwa glsekkaiwy gsfvgfvvqs pieildgfdp aygasatdla anflgssall
      181 aqqlawhdvr impkwsfhlt syaamrpnvl gsnvperwlk dyngqtywlc tdvgaflkpg
      241 nrwprwlqpa vgyggqdmvy nddgtnaekg lrpyrqfyls ldvdlrript rspllkkify
      301 tlsifhlpap aleyngrngf gfhglyl
//
LOCUS       WP_235955995             747 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Rouxiella aceris].
ACCESSION   WP_235955995
VERSION     WP_235955995.1
KEYWORDS    RefSeq.
SOURCE      Rouxiella aceris
  ORGANISM  Rouxiella aceris
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Rouxiella.
REFERENCE   1  (residues 1 to 747)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Rouxiella aceris"
                     /db_xref="taxon:2703884"
     Protein         1..747
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=85986
     Region          81..>183
                     /region_name="DUF2227"
                     /note="Uncharacterized metal-binding protein (DUF2227);
                     cl01017"
                     /db_xref="CDD:470035"
     Region          177..741
                     /region_name="EAL"
                     /note="EAL domain, c-di-GMP-specific phosphodiesterase
                     class I (or its enzymatically inactive variant) [Signal
                     transduction mechanisms]; COG2200"
                     /db_xref="CDD:441802"
     Region          502..738
                     /region_name="EAL"
                     /note="EAL domain. This domain is found in diverse
                     bacterial signaling proteins. It is called EAL after its
                     conserved residues and is also known as domain of unknown
                     function 2 (DUF2). The EAL domain has been shown to
                     stimulate degradation of a second...; cd01948"
                     /db_xref="CDD:238923"
ORIGIN      
        1 mmtqlikklt twhglrhhwy gspllcalil lplaswlspm ldledgrtyl lylplgacva
       61 llmmfdwrai pgislwlygr yylligaema llltsiflfs lcvawagyrw qvrhrwsasf
      121 gllyqplrrl vwlvivlptl flfllqlvie ngalpgylgm vsanfltlrt linyqgvmlg
      181 illeghlfyi vlrivckpry lwvlwakikt qrvagikpae fliwcvlliv mvillcmrrp
      241 mdptkillsd ytvtlllpvl lfgairygyh fitlvwsvtl lilfhhyqgf inpnnffhnl
      301 ifisalmlvf slclllmsai ssrerilmhk vsiaslldpv frlanlrafn rdvekyprsv
      361 lcfvrvaemd ilsknygmrl riqfkqqlvm glqphlqsee giyhlpgydl vlrmnhenie
      421 erldklqeyv dnfrliwngl pvhpniglaw cvvyppvvhm pillgelsgi aevslttgkp
      481 esnkvdhsqv qgvikqkvel lhrvqrsldd dlfvllaqpi agirgdryhe illrmpdeqg
      541 qmispdqflp ivhefglayq ldmwvlkhtl vfinqyrqpl psarfavnfs pstlcrpsfs
      601 qefqqlmkmy qvepyqivle vteshllqdf dyamqtmrel rhfgcriaid dfgtgyatyd
      661 rlksldadil kidgsfvtnm lndpldefiv ssicqvarmk rltvvaeyve teeqqtalra
      721 lgvdymqgyl igkpqplssl lpgtagq
//
LOCUS       WP_235956016             104 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2756 domain-containing protein [Rouxiella aceris].
ACCESSION   WP_235956016
VERSION     WP_235956016.1
KEYWORDS    RefSeq.
SOURCE      Rouxiella aceris
  ORGANISM  Rouxiella aceris
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Rouxiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022409.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10956.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Rouxiella aceris"
                     /db_xref="taxon:2703884"
     Protein         1..104
                     /product="DUF2756 domain-containing protein"
                     /calculated_mol_wt=12141
ORIGIN      
        1 mmkglygmvi altllpasgf aaitqtpiek qqqllinpsq qrmeqrmqsd qqlhqrqlqq
       61 dmkftqqqqq qrlraqsqnd qqrlqqnqld nnqqllqqkl qqtp
//
LOCUS       WP_235956037             670 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Grimontia sedimenti].
ACCESSION   WP_235956037
VERSION     WP_235956037.1
KEYWORDS    RefSeq.
SOURCE      Grimontia sedimenti
  ORGANISM  Grimontia sedimenti
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Grimontia.
REFERENCE   1  (residues 1 to 670)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Grimontia sedimenti"
                     /db_xref="taxon:2711294"
     Protein         1..670
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=74752
     Region          1..384
                     /region_name="CelB"
                     /note="Phosphotransferase system cellobiose-specific
                     component IIC [Carbohydrate transport and metabolism];
                     COG1455"
                     /db_xref="CDD:441064"
     Region          432..659
                     /region_name="EAL"
                     /note="EAL domain. This domain is found in diverse
                     bacterial signaling proteins. It is called EAL after its
                     conserved residues and is also known as domain of unknown
                     function 2 (DUF2). The EAL domain has been shown to
                     stimulate degradation of a second...; cd01948"
                     /db_xref="CDD:238923"
ORIGIN      
        1 mravrdgmlw lvpclilsnt lvftsslldf fgfyvptlqe nltqlidmlv glypyffaas
       61 issmfaiywr lprppvviln mayvavtaqv mgsedkavdt lllfvgltlp lyavpllski
      121 krfrwtrils seiagkpvkd smnmmlpgvi vagivavvam glswvyhlfd vgimlqtlhn
      181 tdfenapies gaifaslnsm lwflgihgyy altplveplv haleinrttv maggeapnvm
      241 nlstmalfvf vggagstlgl sfavlmfsks tkmrlialts iplglfnine lllfglpiif
      301 nlrlflpfll tplinvwvav lvlnsglvti pytlapltsp vvinayiatg gdiaavifqi
      361 aivvmnifvy lpflkmvdeq askqnvylps ldttytrkee eayvlsydpv resllrlrei
      421 evtqlhmesf shrefflefq pqiscetrrv vgvealirvk dqqgnvelpg dflpvfekar
      481 mmsdidmwvv dkcveqcqqw maqgleipis vnitadtlsd qhrmdrivtt issipglihf
      541 eitegallgn ektvgdsirr lhkvgasvhi ddfgtgyssl sylnrfdida lkidqsfvra
      601 ladekgkkvf ngliaiahel gmkiivegve tqeqynyvak khdvkvqgwy farsmgasdf
      661 fdyseryara
//
LOCUS       WP_235956073             249 aa            linear   BCT 02-MAR-2025
DEFINITION  winged helix-turn-helix domain-containing protein [Grimontia
            sedimenti].
ACCESSION   WP_235956073
VERSION     WP_235956073.1
KEYWORDS    RefSeq.
SOURCE      Grimontia sedimenti
  ORGANISM  Grimontia sedimenti
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Grimontia.
REFERENCE   1  (residues 1 to 249)
  AUTHORS   Wietzorrek,A. and Bibb,M.
  TITLE     A novel family of proteins that regulates antibiotic production in
            streptomycetes appears to contain an OmpR-like DNA-binding fold
  JOURNAL   Mol Microbiol 25 (6), 1181-1184 (1997)
   PUBMED   9350875
REFERENCE   2  (residues 1 to 249)
  AUTHORS   Martinez-Hackert,E. and Stock,A.M.
  TITLE     The DNA-binding domain of OmpR: crystal structures of a winged
            helix transcription factor
  JOURNAL   Structure 5 (1), 109-124 (1997)
   PUBMED   9016718
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012698.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00486.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Grimontia sedimenti"
                     /db_xref="taxon:2711294"
     Protein         1..249
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=27968
     Region          2..234
                     /region_name="ompR"
                     /note="osmolarity response regulator; Provisional;
                     PRK09468"
                     /db_xref="CDD:181883"
ORIGIN      
        1 mmssqvshiv vvddeqevrd vladaltqvg ynvtkasngn qlraasdidl avidlrlnne
       61 dglqlarqlr ensdipimml tgkgdatdli iglevaaddy mmkpfnlref tarvnallrr
      121 skksqaiesk pvesdetlyq fsdwtlnlsr rqlihtkghq adltygefsl leafisspqr
      181 vltreqlmek thgfdsdsmd rtidvlvvrl rrkiepnpri psliktergl gyrfdcavaq
      241 vmnsalsdq
//
LOCUS       WP_235956085             186 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Grimontia
            sedimenti].
ACCESSION   WP_235956085
VERSION     WP_235956085.1
KEYWORDS    RefSeq.
SOURCE      Grimontia sedimenti
  ORGANISM  Grimontia sedimenti
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Grimontia.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Grimontia sedimenti"
                     /db_xref="taxon:2711294"
     Protein         1..186
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=21618
     Region          2..179
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(13..14,16..17,20,24,26..32,109,110..111,117..118,
                     120..121)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176123"
ORIGIN      
        1 mstqhaiaqf wlqkrlgnyq hefpehelei tavstvsgqp eetdlalgyf lhdpgrrwqk
       61 lwserllpvs apnyvgkdep vfyqdmhwhd dwrfwqdkfs giqartrrss lyalllqsvl
      121 drqgamvgri sllqdylerg elvpwpddsv nqvesggyyl yrsaacddhp vanhfydwlt
      181 aqcasr
//
LOCUS       WP_235956116              95 aa            linear   BCT 02-MAR-2025
DEFINITION  TfoX/Sxy family DNA transformation protein [Grimontia sedimenti].
ACCESSION   WP_235956116
VERSION     WP_235956116.1
KEYWORDS    RefSeq.
SOURCE      Grimontia sedimenti
  ORGANISM  Grimontia sedimenti
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Grimontia.
REFERENCE   1  (residues 1 to 95)
  AUTHORS   Zulty,J.J. and Barcak,G.J.
  TITLE     Identification of a DNA transformation gene required for com101A+
            expression and supertransformer phenotype in Haemophilus influenzae
  JOURNAL   Proc Natl Acad Sci U S A 92 (8), 3616-3620 (1995)
   PUBMED   7724607
REFERENCE   2  (residues 1 to 95)
  AUTHORS   Williams,P.M., Bannister,L.A. and Redfield,R.J.
  TITLE     The Haemophilus influenzae sxy-1 mutation is in a newly identified
            gene essential for competence
  JOURNAL   J Bacteriol 176 (22), 6789-6794 (1994)
   PUBMED   7961436
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016855.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04994.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Grimontia sedimenti"
                     /db_xref="taxon:2711294"
     Protein         1..95
                     /product="TfoX/Sxy family DNA transformation protein"
                     /calculated_mol_wt=10557
     Region          11..84
                     /region_name="TfoX_C"
                     /note="TfoX C-terminal domain; pfam04994"
                     /db_xref="CDD:461512"
ORIGIN      
        1 mldaydkppk rlrdlngfgp rseeilaevg ihsvqdfmai dpyalyakik pikgmglnai
       61 ysiigareni srieikntrk eeilmvlddm glapk
//
LOCUS       WP_235956139             290 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Grimontia sedimenti].
ACCESSION   WP_235956139
VERSION     WP_235956139.1
KEYWORDS    RefSeq.
SOURCE      Grimontia sedimenti
  ORGANISM  Grimontia sedimenti
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Grimontia.
REFERENCE   1  (residues 1 to 290)
  AUTHORS   Zhang,Y.L., Arakawa,E. and Leung,K.Y.
  TITLE     Novel Aeromonas hydrophila PPD134/91 genes involved in O-antigen
            and capsule biosynthesis
  JOURNAL   Infect Immun 70 (5), 2326-2335 (2002)
   PUBMED   11953367
  REMARK    Erratum:[Infect Immun 2002 Jun;70(6):3308]
REFERENCE   2  (residues 1 to 290)
  AUTHORS   Swartley,J.S., Liu,L.J., Miller,Y.K., Martin,L.E., Edupuganti,S.
            and Stephens,D.S.
  TITLE     Characterization of the gene cassette required for biosynthesis of
            the (alpha1-->6)-linked N-acetyl-D-mannosamine-1-phosphate capsule
            of serogroup A Neisseria meningitidis
  JOURNAL   J Bacteriol 180 (6), 1533-1539 (1998)
   PUBMED   9515923
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025025.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13641.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Grimontia sedimenti"
                     /db_xref="taxon:2711294"
     Protein         1..290
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=33443
     Region          <4..138
                     /region_name="Glyco_tranf_2_3"
                     /note="Glycosyltransferase like family 2; pfam13641"
                     /db_xref="CDD:433372"
ORIGIN      
        1 mryhdlgavt thnkpivkgs sltrqwyrqr maqrhfymss lsltyrvlvl tgrfsafras
       61 malspdfies lrydhvkhwr ygkirmltgd dkstwfyvlk erwkmlyipd mavtcledap
      121 sgsflgtsis lmtrwygnml rsniraiqlg prkaglflwl clldqrismw ttligpslai
      181 fvaaligpkv viaylfwvaa trslnvmlis vqsgqfhpif vvllwyeqmv gslvkvylff
      241 hpnvqrwtrq giagkvedhs msqeikkwlp hlettaafsa llifvmllyg
//
LOCUS       WP_235956215              70 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase [Ruoffia halotolerans].
ACCESSION   WP_235956215
VERSION     WP_235956215.1
KEYWORDS    RefSeq.
SOURCE      Ruoffia halotolerans
  ORGANISM  Ruoffia halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Aerococcaceae; Ruoffia.
REFERENCE   1  (residues 1 to 70)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 70)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Ruoffia halotolerans"
                     /db_xref="taxon:2748684"
     Protein         1..70
                     /product="phosphotransferase"
                     /calculated_mol_wt=7770
     Region          <1..70
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 mwpketgfih gdlypghmli dsnskvigii dwteakhtdv sndftahyll fgeaelenli
       61 qeyqaaggyt
//
LOCUS       WP_235956321             115 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Grimontia sedimenti].
ACCESSION   WP_235956321
VERSION     WP_235956321.1
KEYWORDS    RefSeq.
SOURCE      Grimontia sedimenti
  ORGANISM  Grimontia sedimenti
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Grimontia.
REFERENCE   1  (residues 1 to 115)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 115)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Grimontia sedimenti"
                     /db_xref="taxon:2711294"
     Protein         1..115
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=13095
     Region          <11..100
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(64,67,90,99)
                     /site_type="active"
                     /db_xref="CDD:271177"
ORIGIN      
        1 mlnqnsltms lnneafdvlk kwrgqnpttr flfewreagk pitdvkktwg avleialfeg
       61 fnfhdlrhhf ssklvmagvd lntvrellgh ihlkmalrya ylapelkvta vvlic
//
LOCUS       WP_235956444             172 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: HD domain-containing protein [Ruoffia].
ACCESSION   WP_235956444
VERSION     WP_235956444.1
KEYWORDS    RefSeq.
SOURCE      Ruoffia
  ORGANISM  Ruoffia
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Aerococcaceae.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01966.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Ruoffia"
                     /db_xref="taxon:2862144"
     Protein         1..172
                     /product="HD domain-containing protein"
                     /calculated_mol_wt=19920
     Region          22..>139
                     /region_name="RnaY"
                     /note="HD superfamily phosphodieaserase, includes HD
                     domain of RNase Y [Translation, ribosomal structure and
                     biogenesis, General function prediction only]; COG1418"
                     /db_xref="CDD:441028"
ORIGIN      
        1 mtlkwqkdpe ylalvedlld helvqklemy khhhvtnrll hslsvsyrsy rwakrlklnt
       61 kaiaragllh dlffydcetk hevggkghnf ehprialena kkltelsele cdiilkhmag
      121 atrdvpkyae swivtlmdkh sciaelttga fsfiyrhtvk amdiaynpnq mn
//
LOCUS       WP_235956497             820 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Pseudoalteromonas galatheae].
ACCESSION   WP_235956497
VERSION     WP_235956497.1
KEYWORDS    RefSeq.
SOURCE      Pseudoalteromonas galatheae
  ORGANISM  Pseudoalteromonas galatheae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE   1  (residues 1 to 820)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Pseudoalteromonas galatheae"
                     /db_xref="taxon:579562"
     Protein         1..820
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=92651
     Region          1..>248
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
     Region          171..>382
                     /region_name="NtrY"
                     /note="Signal transduction histidine kinase NtrY involved
                     in nitrogen fixation and metabolism regulation [Signal
                     transduction mechanisms]; COG5000"
                     /db_xref="CDD:444024"
     Region          <366..810
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 msnrvisinl kqtltwgtll cglllsslii yisyvsqrdm llenyetklr qnlthlgkhl
       61 ftefvedndn kisltledyy sdskykalfl iqgetlvnet qhsviglqvf nqvisqaqat
      121 atlrtldltv afdpnqqhfl aaipispkvp vvesanlvrl iaiydvstvf lslrqqlitk
      181 asilaaflil itiallsfth hfihkpikrl iqvgdalstn slscrakiig ygefavlakq
      241 fnvmaqtlek nwqqqlqitq elqchhalit svfealpdif fiintsgiil echtgksddl
      301 yispehfink kmtevlpsha akqfsqaiks anqchqltqi eypltiaeqa klfearlspi
      361 pgteqlviav rditekkrqe evilhhafyd tltdlpnrfl amerlsqqll daerndelav
      421 vffidlddfk rindslghem gdqillasge rlkqslreqd tvsrlsgdef ivlmggfkht
      481 editsvanml iklfhhpiiv gdkdfnisvs igvaiyplda nspqallsca dtamynaksn
      541 grnnyclfnq kmsqqlsrri eieealrvam nenelevfyq pqfyiedsdv fgaeallrwh
      601 sktlgnispa efipvaeqsg liidiglfvl staikqarqw qqhldsdiri ainlsprqfk
      661 dpsllkqiel lvkdipianr fieleitegv lisgqaqvkq tltqlhqlgf klslddfgtg
      721 ysslnylrhy pfdllkidrs fisdmltthe skalvktiia mahnlsmkvv aegvetleql
      781 rllqqlecdf gqgyliskpl saaqfetfyh tkiepvkrss
//
LOCUS       WP_235956506             283 aa            linear   BCT 02-MAR-2025
DEFINITION  RodZ domain-containing protein [Pseudoalteromonas galatheae].
ACCESSION   WP_235956506
VERSION     WP_235956506.1
KEYWORDS    RefSeq.
SOURCE      Pseudoalteromonas galatheae
  ORGANISM  Pseudoalteromonas galatheae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE   1  (residues 1 to 283)
  AUTHORS   Alyahya,S.A., Alexander,R., Costa,T., Henriques,A.O., Emonet,T. and
            Jacobs-Wagner,C.
  TITLE     RodZ, a component of the bacterial core morphogenic apparatus
  JOURNAL   Proc Natl Acad Sci U S A 106 (4), 1239-1244 (2009)
   PUBMED   19164570
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024855.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13464.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Pseudoalteromonas galatheae"
                     /db_xref="taxon:579562"
     Protein         1..283
                     /product="RodZ domain-containing protein"
                     /calculated_mol_wt=31252
     Region          5..280
                     /region_name="PRK10856"
                     /note="cytoskeleton protein RodZ"
                     /db_xref="CDD:236776"
ORIGIN      
        1 mkeqeapeqe qpslgqtlat arqnagisfa eiesrlkmth aqltkleqdd yqglgpetfv
       61 rgyiknyaal lglnpaevla kyqspelppq kkrmqsfsrr thkeahdnrl mmvsyivlai
      121 vlgssafwfw qtnsseqevv setpvtqlet paenvttpam devalpaeqi nevapqsepq
      181 aseaevsvpv eakpqavkrd palstvvmhf neeswvemfd atqervafgv kkagytmtve
      241 gkapfsvilg khqavevtld gkpvplpaft knrlakfnlp lte
//
LOCUS       WP_235956535             221 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ShlB/FhaC/HecB family hemolysin secretion/activation
            protein [Pseudoalteromonas].
ACCESSION   WP_235956535
VERSION     WP_235956535.1
KEYWORDS    RefSeq.
SOURCE      Pseudoalteromonas
  ORGANISM  Pseudoalteromonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae.
REFERENCE   1  (residues 1 to 221)
  AUTHORS   Desvaux,M., Parham,N.J. and Henderson,I.R.
  TITLE     Type V protein secretion: simplicity gone awry?
  JOURNAL   Curr Issues Mol Biol 6 (2), 111-124 (2004)
   PUBMED   15119822
REFERENCE   2  (residues 1 to 221)
  AUTHORS   Walker,G., Hertle,R. and Braun,V.
  TITLE     Activation of Serratia marcescens hemolysin through a
            conformational change
  JOURNAL   Infect Immun 72 (1), 611-614 (2004)
   PUBMED   14688146
REFERENCE   3  (residues 1 to 221)
  AUTHORS   Jacob-Dubuisson,F., Locht,C. and Antoine,R.
  TITLE     Two-partner secretion in Gram-negative bacteria: a thrifty,
            specific pathway for large virulence proteins
  JOURNAL   Mol Microbiol 40 (2), 306-313 (2001)
   PUBMED   11309114
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03865.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Pseudoalteromonas"
                     /db_xref="taxon:53246"
     Protein         1..221
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /calculated_mol_wt=24590
     Region          <74..221
                     /region_name="FhaC"
                     /note="Hemolysin activation/secretion protein
                     [Intracellular trafficking, secretion, and vesicular
                     transport]; COG2831"
                     /db_xref="CDD:442079"
ORIGIN      
        1 mlqdvdlinh sedfnlgwsl aakagidtea dgvgsiwefs ankawlfned llyrfkastn
       61 aqigtqqgdr vwstlaakvn yrwsdsfafy adviaawqnk efaerplalg geegirgfpq
      121 syqqgmqtvk ssfelrmypn iniyqlvdlg fvgfvdmgka sgniqhpnis nkmlgsvglg
      181 vrlysarssn envvhidftk plsnypevds welglsveth f
//
LOCUS       WP_235956576             270 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: phosphotransferase [Pseudoalteromonas].
ACCESSION   WP_235956576
VERSION     WP_235956576.1
KEYWORDS    RefSeq.
SOURCE      Pseudoalteromonas
  ORGANISM  Pseudoalteromonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae.
REFERENCE   1  (residues 1 to 270)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 270)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Pseudoalteromonas"
                     /db_xref="taxon:53246"
     Protein         1..270
                     /product="phosphotransferase"
                     /calculated_mol_wt=30881
     Region          31..200
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(35..38,41,43,54,56,80,94..97,167,171..172,174,
                     183..184)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          118..252
                     /region_name="CotS"
                     /note="Thiamine kinase or a related kinase [Coenzyme
                     transport and metabolism]; COG0510"
                     /db_xref="CDD:440276"
ORIGIN      
        1 mklskerrlq hseleelkvk vdtvfkvspe rlekltkgvs nnnylmvskg esyllkcysh
       61 giptealkaq nklaqqgits kvlqydlrtr malftfmpqv caeprltpel laqviqvhsl
      121 elevyevldl vgyvqaidee lrhlvdierl ieslaslpmd lafchndlvm sniiqspegv
      181 rlidfeyach sdiffdlaal vcsfscgvee slivvesyfs lkhqvmpsya qakltvfcqi
      241 ylivsiqwye qrsviteaek lrqllkqwls
//
LOCUS       WP_235956700             701 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: winged helix-turn-helix domain-containing protein
            [Pseudoalteromonas].
ACCESSION   WP_235956700
VERSION     WP_235956700.1
KEYWORDS    RefSeq.
SOURCE      Pseudoalteromonas
  ORGANISM  Pseudoalteromonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae.
REFERENCE   1  (residues 1 to 701)
  AUTHORS   Wietzorrek,A. and Bibb,M.
  TITLE     A novel family of proteins that regulates antibiotic production in
            streptomycetes appears to contain an OmpR-like DNA-binding fold
  JOURNAL   Mol Microbiol 25 (6), 1181-1184 (1997)
   PUBMED   9350875
REFERENCE   2  (residues 1 to 701)
  AUTHORS   Martinez-Hackert,E. and Stock,A.M.
  TITLE     The DNA-binding domain of OmpR: crystal structures of a winged
            helix transcription factor
  JOURNAL   Structure 5 (1), 109-124 (1997)
   PUBMED   9016718
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012698.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00486.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Pseudoalteromonas"
                     /db_xref="taxon:53246"
     Protein         1..701
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=78964
     Region          13..127
                     /region_name="CadC1"
                     /note="DNA-binding winged helix-turn-helix (wHTH) domain
                     [Transcription]; COG3710"
                     /db_xref="CDD:442924"
     Region          <174..266
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
     Region          339..538
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
     Region          471..616
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
ORIGIN      
        1 mylllvgkmr qgttykllev nvdtighlls sgrqtccvqp kfievltvla rayprvvtre
       61 eiieqvwdgn lfvgekaltn aiwhlrktfk tllaiseeer easeleiiet irksgyrlkv
      121 aptftnarin sdphdmqrps lkakimavvt illfvlfaff yffvgqsalk ptpqleevtd
      181 ypgrelfpsv spneqflvfa wrklgshsgl ylkhlaqpel pikeltngpg nasvsvwsrd
      241 nrtlfyiekr agqceiksld vitkvqsyia ncvsdttttl tysvrnnvlg fiankdqtge
      301 arvtllnlnd rtstelgcei dcegselesv efapnaaqia itrnlpngle nlylkdletg
      361 keikilngld dlrgiswhps gdylvissie hgtrsaykis pegktlgilp fdglsypsfs
      421 rsgrlyfhdw niktsimkld lnaqvasspf pllqspvsfr ypnysplser ivfvsnqsgf
      481 deiwtssltg dkreqmttls lqalhpiwsp dgtkiifltk sqqgsqlqll dvnskqvtqi
      541 dtgleyhgkp swssdgsgvy vsdgrdlyhl plssesapvk ltkgdvayeq egllyvyrge
      601 lqemwymdla tgvetllfkn ahlassasws vshsgiyyly vwrgdfrisy fdfaskvhkd
      661 iirvpersfs rsrglafiae kqwllftgye tpqvdikqve m
//
LOCUS       WP_235956712              87 aa            linear   BCT 02-MAR-2025
DEFINITION  PoNe immunity protein domain-containing protein [Pseudoalteromonas
            galatheae].
ACCESSION   WP_235956712
VERSION     WP_235956712.1
KEYWORDS    RefSeq.
SOURCE      Pseudoalteromonas galatheae
  ORGANISM  Pseudoalteromonas galatheae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE   1  (residues 1 to 87)
  AUTHORS   Jana,B., Fridman,C.M., Bosis,E. and Salomon,D.
  TITLE     A modular effector with a DNase domain and a marker for T6SS
            substrates
  JOURNAL   Nat Commun 10 (1), 3595 (2019)
   PUBMED   31399579
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020501.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08928.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Pseudoalteromonas galatheae"
                     /db_xref="taxon:579562"
     Protein         1..87
                     /product="PoNe immunity protein domain-containing protein"
                     /calculated_mol_wt=10105
     Region          3..>65
                     /region_name="DUF1910"
                     /note="Domain of unknown function (DUF1910); pfam08928"
                     /db_xref="CDD:430325"
ORIGIN      
        1 mirdtfrdks yfdeavefye etiledvael dssdltieik mrtcfdlinn iislmhvkys
       61 rgdsiiefnp pfercdnlsp sskevcr
//
LOCUS       WP_235956719            4599 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Pseudoalteromonas galatheae].
ACCESSION   WP_235956719
VERSION     WP_235956719.1
KEYWORDS    RefSeq.
SOURCE      Pseudoalteromonas galatheae
  ORGANISM  Pseudoalteromonas galatheae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE   1  (residues 1 to 4599)
  AUTHORS   Clarke,T.A., Edwards,M.J., Gates,A.J., Hall,A., White,G.F.,
            Bradley,J., Reardon,C.L., Shi,L., Beliaev,A.S., Marshall,M.J.,
            Wang,Z., Watmough,N.J., Fredrickson,J.K., Zachara,J.M., Butt,J.N.
            and Richardson,D.J.
  TITLE     Structure of a bacterial cell surface decaheme electron conduit
  JOURNAL   Proc Natl Acad Sci U S A 108 (23), 9384-9389 (2011)
   PUBMED   21606337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037016.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17963.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4599
                     /organism="Pseudoalteromonas galatheae"
                     /db_xref="taxon:579562"
     Protein         1..4599
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=465356
     Region          34..1687
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          978..2670
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          1851..3526
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          3530..3619
                     /region_name="tand_rpt_95"
                     /note="tandem-95 repeat; NF012211"
                     /db_xref="CDD:333740"
     Region          3598..3686
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
     Region          4191..4278
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          4301..4369
                     /region_name="tand_rpt_95"
                     /note="tandem-95 repeat; NF012211"
                     /db_xref="CDD:333740"
     Region          4420..4599
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mklskvatav tsagisaalf sgniwagqki ldyssgtgtp tdvrdgasgv pdisldtagd
       61 vtfildgges gdsytaesfa vafssfyaan fignsgasat dkaykllena gthfsfdgit
      121 fvratatdae hrvrftgfkd ggqtvtvdlt ppvgpgvgtt fsftrssdfn nalwqdidtl
      181 iisfpdtdpa saydsrfair nitlddapas dstppvfvsa sstptddatn vsvsndivia
      241 fdeditlgsg nitirnvtdn svfeefdvan esdgtttspg agrvsitndk vylnppgnlv
      301 gnrtyaiqid sgavtdtssn pftgisddtt fnfttvntap vvdlnsgtgg ndntasfseg
      361 sgavniassa svtdadgdti ssieitltnp kgdtgeglyv sasavdtlkg tsgssafegv
      421 stidisslsa saaqvqtflq avtynntsst pnetartvtv qindgtidsd srtasisvtd
      481 vtaasssaag fdttngtnls paitfaggde tltianasht tgstasggtg tdvlsvptst
      541 nlasltslsg fetltpdsga sitltesqhe sfttingagt nqftlssadg dgtisgdadi
      601 etyvlgagft ftlggasqnv tgsssadtvv tgsvtatgtl agsggtdvlq lsngasiaga
      661 tvsgfetltl danaavtmte aqhdafstvn gsatesitis aatdgltaas aietyvlgaa
      721 nsitlsaagq nvtgssgndt vnigtltatg tlnaaggtdt lsmssgasia gatvsnfenl
      781 tlasgatvsm tasqpalfgg titaagteti nisgdgdftt lanvesfsvg dsltnsrtit
      841 vgaagtsvta ssstdavtfn vgtlsytgtl tgdattadtl smssganisg gtlanivnlt
      901 lasgasvtmt peqnatftgt vtaagsetit isgdgdfttl tgietysvnd dstntrtitv
      961 tnasatidat vsndaitfdi agsafngslv gdpttgdtvs asdgadvssg gftnigtlsl
     1021 ssgatvaida anvannftta itgaagsetl klmdggtfnf tntsvseien laigtnnift
     1081 itltdnfdsn gnsvtisnal gfalaggitl nasalsgdti nmtatdfdgn dtitggsgtd
     1141 tirpgggtds mtgnagndnf vgdasdlngd titdlsvgdi itinsvtglt tsnvrfngts
     1201 tlqvdtnatd fssievaisl snapanslgf tvadngantd itfitpndvp vfsnlngggt
     1261 fiengssvvi dsdvliadte ldaldsgagn ynnatltiar ngganaqdvf gnngllgtlt
     1321 esstftfnst tvgtvttnss gtlvltfntn atsafvdsvl qnityqnssd appssvtldy
     1381 tfndgianst gtnqavvnit gqndaptdis ldtssinqsa tgaganigtl sttdldtsds
     1441 htysivssga sangtcsadt dngsfqings nleaqaaina gsyivciqts dstttfqeaf
     1501 tvtvnddvap napstpdlda gsdtgssnsd nntndttptf sgtaesgstv rlysdqeggg
     1561 ttvigtgtat ggnwqittsa ltagvthait akatdansne ssassslsvt idttapsapg
     1621 tpdldassdt gtsntdnitn dttatftgsg pnggaitlis sidgtvgtgi atlgtwtitt
     1681 saltagthtm tarstdtagn tadgsglsvt vdtsvsavsi ttpievdglv naaedndvli
     1741 agssaeagns vtvtitdnns svsrtvtadn sgnwtlsgse ldvsglnngt ltvsatqtdt
     1801 agntssaatq titldnaaps avtittpiet dglvnaaedn dvlivgsgae agnsvtvtit
     1861 dnnssvsrtv tadnsgnwtl sgseldvsgl nngtltvsat qadsagntst aatqtitldn
     1921 aapsavtitt pietdglvna aedndvliag sgaeagnsvt vtitdnnssv srtvtadnsg
     1981 nwtlsgseld vsglnngtlt vsatqadsag ntstaatqti tldnaapsav tittpietdg
     2041 lvnaaedndv liagsgaeag nsvtvtitdn nssvsrtvta dnsgnwtlsg seldvsglnn
     2101 gtltvsatqa dsagntstaa tqtitldnaa psavtittpi etdglvnaae dndvliagsg
     2161 aeagnsvtvt itdnnssvsr tvtadnsgnw tlsgseldvs glnngtltvs atqadsagnt
     2221 staatqtitl dnaapsavti ttpietdglv naaedndvli agsgaeagns vtvtitdnns
     2281 svsrtvtadn sgnwtlsgse ldvsglnngt ltvsatqads agntstaatq titldnaaps
     2341 avtittpiet dglvnaaedn dvliagsgae agnsvtvtit dnnssvsrtv tadnsgnwtl
     2401 sgseldvsgl nngtltvsat qadsagntst aatqtitldn aapsaititt pietdglvna
     2461 aedndvlivg sgaeagnsvt vtitdnnssv srtvtadnsg nwtlsgseld vsglnngtlt
     2521 vsatqadsag ntstaatqti tldnaapsav tittpietdg lvnaeedndv liagsgaeag
     2581 nsvtvtitdn nssvsrtvta dnsgnwtlsg seldvsglnn gtltvsatqv dsagntstaa
     2641 tqtitldnsa psgisatidq dlinagneta fsftltgles tgsftyeisd gsssvssasa
     2701 taitgttqqe tginvtslne gtltlsvtva ddagneanvv tdtvikkynv apvlsgtpat
     2761 tvdedseydf tptladsdtg dthtfsitnk pnwatfdtqt gklsgtpdds hvgtttdiei
     2821 svsdgtdsdt lsafnievvn tndaptgqnt sftidegatl srdlnnglls lasdddldss
     2881 dsltvvkdtd pqygtltlnt dgsfsyvhgg senhtdsfty hiedsvnass pvytvtinmn
     2941 avedaptavn dtlttledas nsvnvltnds dpennmvass vsiktqptkg qlsvsngvvt
     3001 ftptanangs dsftytvkds tqaesneatv sititpvndl pvaanftpni dedtptsalt
     3061 vrtsatdved tnptgviale sqpskgqaai dlsngtityt pnanetgnds ftysildseg
     3121 gksniatisv nigavndrpv agndtvttde dtvttltila ndsdvedqgf dgsdialedk
     3181 gdgvgnydla tvtvgsdgvl titpkqdqng tltftytied seglrsepat vtvnitavnd
     3241 apvavnntaq lledgniein vlgndtdvds qlnaasvaiv nqpqggslqi lttgnivytp
     3301 nanffgndsf tytvqdaegl vsnaatvnit vtpindapvi sgapstsvne dvaysftpta
     3361 tdtdgdsltf svanlpvwas fsdttgaitg tpsegqdgty sgivitvsdg qadaslpafn
     3421 ivvnavndap iisgtpstsv kqdevysftp tasdvdsqal tfsvtnlpaw asfdtssgnl
     3481 agtptredvg tysniiisvs dgvlqaslpa feinvepvna apiannmqrs vledgttsfs
     3541 aeasdpdgda ltmelvsqpq ngvvqiqgtv fsytplpnfn gsdvftytvs dgefksntas
     3601 vsmtvtsvnd apiavddsft fdavasnqyv lpvlnndsdp dgsalriiga kasigsafia
     3661 nntltyqaiq nsqapivvty lieddskara kanasiting tgsgnapsit apsdltvnat
     3721 glftkvnlgt avasdsagnp lpvslvrgip ifapgkhivy wqatdsqgqq avasqnlnvn
     3781 plvslqkdsr vaedrshsvk vylngpapsy pvtvpytvsg sadssdhdlq sgevvinsgt
     3841 sasisfnila dgisedneti vislsdslnr gakststvti veqnvapsls avvqqngeer
     3901 slitasneev tieavvtdpn pndivnvswq pdtalvntsn dpfifafnpa nipsgiykvr
     3961 vtaednatps lstsrnvfie vveslaplsg edsdgdlipd dqegyadede dgipdfmdai
     4021 tdcnvvqeqa lessqflveg dpgvclrkga tvpqnntggl qlleselpsd pnannagglf
     4081 dfiatglpqp gdvysivlpq rkpiplnavy rkliggewrd fvvgegnell stqgepgfcp
     4141 ppgsnewsag lsdgdwcvql rivdggpndd dgiangsivd pggiavpisn naqpvanads
     4201 vtivsgqtii idvlendtds dndtltitga svdfgvvsie nnqlnytppa afignatiqy
     4261 svtdgqggss nstatvsiia nqppqvandt avsngakiii dvlandsdpe ggilslvsat
     4321 asqgtvaini dgtlsytpka gfegvdtiny vvkdefgata egqvsvtvsv kqvtsvtnks
     4381 sgtmggmlll lisavilrrk ksiipafalv stscllstqa qasnwqleat lgqstadsei
     4441 sasdlnivnl dedssswsig afyelipnwq vglryidlgq gsveftglsa dpeqsqmala
     4501 rvapvlpegp alqfnyskpf adkfvgkmfl gafnwdykin svrdgqfstr yedsgtsgyi
     4561 gggvhyqlsd altlgvdfsh yfistndind lalnlsyrf
//
LOCUS       WP_235956742             327 aa            linear   BCT 02-MAR-2025
DEFINITION  endonuclease/exonuclease/phosphatase family protein [Salipiger sp.
            PrR002].
ACCESSION   WP_235956742
VERSION     WP_235956742.1
KEYWORDS    RefSeq.
SOURCE      Salipiger sp. PrR002
  ORGANISM  Salipiger sp. PrR002
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 327)
  AUTHORS   Dlakic,M.
  TITLE     Functionally unrelated signalling proteins contain a fold similar
            to Mg2+-dependent endonucleases
  JOURNAL   Trends Biochem Sci 25 (6), 272-273 (2000)
   PUBMED   10838565
REFERENCE   2  (residues 1 to 327)
  AUTHORS   Mol,C.D., Kuo,C.F., Thayer,M.M., Cunningham,R.P. and Tainer,J.A.
  TITLE     Structure and function of the multifunctional DNA-repair enzyme
            exonuclease III
  JOURNAL   Nature 374 (6520), 381-386 (1995)
   PUBMED   7885481
REFERENCE   3  (residues 1 to 327)
  AUTHORS   Lahm,A. and Suck,D.
  TITLE     DNase I-induced DNA conformation. 2 A structure of a DNase
            I-octamer complex
  JOURNAL   J Mol Biol 222 (3), 645-667 (1991)
   PUBMED   1748997
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015338.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03372.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Salipiger sp. PrR002"
                     /db_xref="taxon:2706489"
     Protein         1..327
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=34954
     Region          9..322
                     /region_name="YafD"
                     /note="Uncharacterized conserved protein YafD,
                     endonuclease/exonuclease/phosphatase (EEP) superfamily
                     [General function prediction only]; COG3021"
                     /db_xref="CDD:442257"
ORIGIN      
        1 mtrlipalfl cavlalpasa gaveitlatw hahlsrkgpg lllrdilear aplpaildqi
       61 aearpdvlll tdmdfdlgqa aldaladqla argadyphrf alrpnsgmes gadldadgrl
      121 ggprdaqgyg afsgqhgmav larhplrler dfsallwrdl pgtrmhpadp apevqrlsst
      181 ahwvlrldap gqplqllcys atppvfdgpe drngrrnade lalwrhyldg algpapegaf
      241 vlignanldp eggeglrgem rallddarlq dplpqqatae wdstgplrvs yvlpsagltv
      301 gdarvypaie gqrhrlvtvt lstqmgg
//
LOCUS       WP_235956906             311 aa            linear   BCT 02-MAR-2025
DEFINITION  prephenate dehydrogenase/arogenate dehydrogenase family protein
            [Fundidesulfovibrio magnetotacticus].
ACCESSION   WP_235956906
VERSION     WP_235956906.1
KEYWORDS    RefSeq.
SOURCE      Fundidesulfovibrio magnetotacticus
  ORGANISM  Fundidesulfovibrio magnetotacticus
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Fundidesulfovibrio.
REFERENCE   1  (residues 1 to 311)
  AUTHORS   Shabalin,I.G., Gritsunov,A., Hou,J., Slawek,J., Miks,C.D.,
            Cooper,D.R., Minor,W. and Christendat,D.
  TITLE     Structural and biochemical analysis of Bacillus anthracis
            prephenate dehydrogenase reveals an unusual mode of inhibition by
            tyrosine via the ACT domain
  JOURNAL   FEBS J 287 (11), 2235-2255 (2020)
   PUBMED   31750992
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014234.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02153.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Fundidesulfovibrio magnetotacticus"
                     /db_xref="taxon:2730080"
     Protein         1..311
                     /product="prephenate dehydrogenase/arogenate dehydrogenase
                     family protein"
                     /GO_function="GO:0008977 - prephenate dehydrogenase (NAD+)
                     activity [Evidence IEA]"
                     /GO_function="GO:0033730 - arogenate dehydrogenase (NADP+)
                     activity [Evidence IEA]"
                     /GO_function="GO:0070403 - NAD+ binding [Evidence IEA]"
                     /GO_process="GO:0006571 - tyrosine biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=33233
     Region          <12..242
                     /region_name="tyrA"
                     /note="bifunctional chorismate mutase/prephenate
                     dehydrogenase; Provisional; PRK11199"
                     /db_xref="CDD:183035"
ORIGIN      
        1 mskpsaiatl avvgasgkmg rlftarcrre glacfeldap ldmdqaaral pradlvllcv
       61 paqavtealr alaplipkgc avadicsvkv rpleemlalh pgpvvgthpl fgpvppegea
      121 prvavcpgrg eaaclqveel larlgfapfr ttahehdram ayvqglnfvs tvaylaaqsa
      181 hegferfltp sftrrleasr kliledaelf rlifeanphs leavrsfrny lnvaaggdle
      241 llverarsww rqpapaptcn rddepapkhg mpkglapsaa egfsrdsapa pdraagetpp
      301 aptrsnkddt p
//
LOCUS       WP_235956916             876 aa            linear   BCT 02-MAR-2025
DEFINITION  PEP/pyruvate-binding domain-containing protein [Fundidesulfovibrio
            magnetotacticus].
ACCESSION   WP_235956916
VERSION     WP_235956916.1
KEYWORDS    RefSeq.
SOURCE      Fundidesulfovibrio magnetotacticus
  ORGANISM  Fundidesulfovibrio magnetotacticus
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Fundidesulfovibrio.
REFERENCE   1  (residues 1 to 876)
  AUTHORS   Lim,K., Read,R.J., Chen,C.C., Tempczyk,A., Wei,M., Ye,D., Wu,C.,
            Dunaway-Mariano,D. and Herzberg,O.
  TITLE     Swiveling domain mechanism in pyruvate phosphate dikinase
  JOURNAL   Biochemistry 46 (51), 14845-14853 (2007)
   PUBMED   18052212
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01326.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Fundidesulfovibrio magnetotacticus"
                     /db_xref="taxon:2730080"
     Protein         1..876
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0016310 - phosphorylation [Evidence IEA]"
                     /calculated_mol_wt=96411
     Region          123..556
                     /region_name="PpsA"
                     /note="Phosphoenolpyruvate synthase/pyruvate phosphate
                     dikinase [Carbohydrate transport and metabolism]; COG0574"
                     /db_xref="CDD:440339"
ORIGIN      
        1 mftrlktffs sligghhqge gmsdeeilae fkkryhnfrl lltankktlm imsemeqalr
       61 gasvfgmsfv rsqataasvn vyrivkhlse iapgkydalf erlkdiqaqi aavldrqpqt
      121 aatelvlple avdrahadqv gskmanlgdi marvglpvpp gfavtalays rfmrdtglgd
      181 einrliqavg addhatllpl csqiqqmiqn aklppdvaea ilkaylelea rtepdvrvsm
      241 rssalgedam gqsfagqfrs vlgvsaeell iaykeivask yspqavtyrm akgipnedva
      301 mcvgcmamvk arsggviysr nplsirddei fihsawglak tvvdgavasd lfvarrgdpp
      361 rlteqriack drvylcdpve gvcrheeage aacapsltde ealrlasmai rldevyaepl
      421 diewamdqer nifllqcrpl qqieagrakr ppgqfgkpla aggvtgspgv aagtvhvvar
      481 dldmltfpeg gvvlaadaap rwatllsras alvcergsva ghlsnvaref gvpalmgmeg
      541 avaalsgkge vtvdadglav ypgrveslla lapkretpqa qspmhailre vldivaplnl
      601 ldpsvpefsp encltlhdit rfcheksvte mfrfgqdfqf skraskqlky rvpmkwwfvn
      661 lddgftreit gkyvtmeeia cepvlslweg fvavpwagpp pvdaagllhi vahstvnrnl
      721 thggdseyaq gnyfmisrhy mclssrfgyh fctvealvde rehenyvsfq fkggaaeqgr
      781 ralrakfvge vlenynfrve iqgdemravy akgpmdlmld rlrvigyllm htrqidmvmt
      841 neamvegfrq kfakdigdil rqaaerhmte vmrema
//
LOCUS       WP_235956948             650 aa            linear   BCT 02-MAR-2025
DEFINITION  SpoIIE family protein phosphatase [Fundidesulfovibrio
            magnetotacticus].
ACCESSION   WP_235956948
VERSION     WP_235956948.1
KEYWORDS    RefSeq.
SOURCE      Fundidesulfovibrio magnetotacticus
  ORGANISM  Fundidesulfovibrio magnetotacticus
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Fundidesulfovibrio.
REFERENCE   1  (residues 1 to 650)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Fundidesulfovibrio magnetotacticus"
                     /db_xref="taxon:2730080"
     Protein         1..650
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=70444
     Region          63..203
                     /region_name="PDC1_MCP_like"
                     /note="first PDC (PhoQ/DcuS/CitA) domain of
                     methyl-accepting chemotaxis proteins and similar domains;
                     cd12913"
                     /db_xref="CDD:350338"
     Region          206..640
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
ORIGIN      
        1 msrppsvtps rglafrlslv ilacttaifg aafawyhtas kealvrqare dagnltlast
       61 rkiesvlasv eeipgllayg ygkarptrqa irqdltgfiv ynpavygacv ayapgayepg
      121 lrrfapyayk vegvpvvkel egdgypladw flipkelgrp lwsepyfdeg gggivmstyg
      181 vpfhsvedgr rafkgvvtad vslewlrell sgitvyrsgy afllsrngvf lthpdasyvm
      241 resvfslaeq agsqelrrig qemirggtgf vrlpefvlgr pawlsyapvm ktgwsmglvi
      301 pegelfadle rlgrqvlgig lggfallfav vvvvstsitr plktlagrta eiargnldip
      361 vpqpatgdev gqlarsfeem rlalreyian ltettkaker meselkiart iqmsflpkrf
      421 ppfpeieafe lhaalepale vggdlfdffm ledgrllflv gdvsgkgvpa alfmavtktl
      481 ikgiaevehs paaildrvnr ellvdnesml fvtmflgild hqtgelvysn aghnppalmg
      541 ggaaswlplp kglflgvmdv avykdmsvrl apgqcllvtt dgvneavdea rafytserll
      601 etaaalsgrg arevcegvts svrafqgraa qadditvlal vyrgaarger
//
LOCUS       WP_235956954             748 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3536 domain-containing protein [Fundidesulfovibrio
            magnetotacticus].
ACCESSION   WP_235956954
VERSION     WP_235956954.1
KEYWORDS    RefSeq.
SOURCE      Fundidesulfovibrio magnetotacticus
  ORGANISM  Fundidesulfovibrio magnetotacticus
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Fundidesulfovibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023478.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12055.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Fundidesulfovibrio magnetotacticus"
                     /db_xref="taxon:2730080"
     Protein         1..748
                     /product="DUF3536 domain-containing protein"
                     /calculated_mol_wt=82164
     Region          5..328
                     /region_name="GH57N_APU_like_1"
                     /note="N-terminal putative catalytic domain of mainly
                     uncharacterized prokaryotic proteins similar to archaeal
                     thermoactive amylopullulanases; glycoside hydrolase family
                     57 (GH57); cd10797"
                     /db_xref="CDD:212109"
     Site            order(9,11,154,258,313,322)
                     /site_type="active"
                     /db_xref="CDD:212109"
     Region          336..>500
                     /region_name="DUF3536"
                     /note="Domain of unknown function (DUF3536); pfam12055"
                     /db_xref="CDD:432293"
ORIGIN      
        1 mddnflcihg hfyqppredp wlgtilpegs aapwlnwnqr itresyapla rarrldgssr
       61 itevmncyew msfnagptll hwmaqtdpdt lrlmveadra sakrlghgna maqvyhhqil
      121 plasqldkel evawavddft arfgrapegm wlaeaavdta slevlaragi aftvlaprqa
      181 ravgpledga ltpvdqgsld irrpylvrlp sgrhisvffy dgplsqavaf erlladggdf
      241 wrrlagasgp gltalatdge tyghhftfge malayvldqa regrggprlt nfaafladnp
      301 ptrrvelhep sswscahgve rwrsdcgctd gghpgwrqtw rgplrkalqd akdaadqhff
      361 qrgalcfkdp realtrygrv lsglatpeaf ardhflerlp apeqdaawkl lamqqwglas
      421 lascawffde isriepvnam tyalralelm rrtggpdmea pfaealrqap snlpeygdga
      481 gvlracalpr retpasltaq alwtlwaedr lpapgasarv awpgvavtvt psapgagkvs
      541 iawnlepapd easyrwtppp sdpdpardpl slpvtvthpg geesfvpral pvnkrqalad
      601 afarraaqra wdagkaamav ganlvtelqe aqttmtlaql wagqwthlaw awlngleieg
      661 krlellklfl gqcsgdprer ealmervcah alalaasdap dwtalsllve rarslglped
      721 wwsvqnllwd lglhhgagrd farqlgfa
//
LOCUS       WP_235956956             263 aa            linear   BCT 02-MAR-2025
DEFINITION  radical SAM protein [Fundidesulfovibrio magnetotacticus].
ACCESSION   WP_235956956
VERSION     WP_235956956.1
KEYWORDS    RefSeq.
SOURCE      Fundidesulfovibrio magnetotacticus
  ORGANISM  Fundidesulfovibrio magnetotacticus
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Fundidesulfovibrio.
REFERENCE   1  (residues 1 to 263)
  AUTHORS   Benjdia,A., Leprince,J., Guillot,A., Vaudry,H., Rabot,S. and
            Berteau,O.
  TITLE     Anaerobic sulfatase-maturating enzymes: radical SAM enzymes able to
            catalyze in vitro sulfatase post-translational modification
  JOURNAL   J Am Chem Soc 129 (12), 3462-3463 (2007)
   PUBMED   17335281
REFERENCE   2  (residues 1 to 263)
  AUTHORS   Berteau,O., Guillot,A., Benjdia,A. and Rabot,S.
  TITLE     A new type of bacterial sulfatase reveals a novel maturation
            pathway in prokaryotes
  JOURNAL   J Biol Chem 281 (32), 22464-22470 (2006)
   PUBMED   16766528
REFERENCE   3  (residues 1 to 263)
  AUTHORS   Sofia,H.J., Chen,G., Hetzler,B.G., Reyes-Spindola,J.F. and
            Miller,N.E.
  TITLE     Radical SAM, a novel protein superfamily linking unresolved steps
            in familiar biosynthetic pathways with radical mechanisms:
            functional characterization using new analysis and information
            visualization methods
  JOURNAL   Nucleic Acids Res 29 (5), 1097-1106 (2001)
   PUBMED   11222759
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015983.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04055.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Fundidesulfovibrio magnetotacticus"
                     /db_xref="taxon:2730080"
     Protein         1..263
                     /product="radical SAM protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0051539 - 4 iron, 4 sulfur cluster
                     binding [Evidence IEA]"
                     /calculated_mol_wt=27779
     Region          15..198
                     /region_name="NrdG2"
                     /note="anaerobic ribonucleoside-triphosphate reductase
                     activating protein; TIGR02495"
                     /db_xref="CDD:274164"
ORIGIN      
        1 mehharhata tplpriravt plslcdwpgr saavlylggc nlrcptchna slaftpsrhp
       61 aldasavlkg laararwldg vvvcggeptl dpglfplvqa ldalgppvkv dtngmapdvv
      121 erlfeacprt cfavdvkgpw ekypvltgga aspeaarerl eavfalaard parfrfritl
      181 vpeltpddvs aarrqlppcf tlneqtylpp pagketahal adpearrlpg nlvpgahrpg
      241 hpespqgqrr agpaalqapg aqg
//
LOCUS       WP_235957010             135 aa            linear   BCT 02-MAR-2025
DEFINITION  phage regulatory CII family protein [Fundidesulfovibrio
            magnetotacticus].
ACCESSION   WP_235957010
VERSION     WP_235957010.1
KEYWORDS    RefSeq.
SOURCE      Fundidesulfovibrio magnetotacticus
  ORGANISM  Fundidesulfovibrio magnetotacticus
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Fundidesulfovibrio.
REFERENCE   1  (residues 1 to 135)
  AUTHORS   Richardson,H., Puspurs,A. and Egan,J.B.
  TITLE     Control of gene expression in the P2-related temperate coliphage
            186. VI. Sequence analysis of the early lytic region
  JOURNAL   J Mol Biol 206 (1), 251-255 (1989)
   PUBMED   2704042
REFERENCE   2  (residues 1 to 135)
  AUTHORS   Kalionis,B., Dodd,I.B. and Egan,J.B.
  TITLE     Control of gene expression in the P2-related template coliphages.
            III. DNA sequence of the major control region of phage 186
  JOURNAL   J Mol Biol 191 (2), 199-209 (1986)
   PUBMED   3806670
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018587.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06892.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Fundidesulfovibrio magnetotacticus"
                     /db_xref="taxon:2730080"
     Protein         1..135
                     /product="phage regulatory CII family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=14317
     Region          4..133
                     /region_name="Phage_CP76"
                     /note="Phage regulatory protein CII (CP76); cl06105"
                     /db_xref="CDD:471385"
ORIGIN      
        1 mrapsgipaq tiadlldwky atmmselsgq pghklgaeri lplldvtgsd aplhflarer
       61 ggvfvklpqv egplepvtrq clvamrefge lvgatsdalv dgaispeeak hilrlgheav
      121 tavmallkvv earpc
//
LOCUS       WP_235957032             259 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaJ domain-containing protein [Fundidesulfovibrio
            magnetotacticus].
ACCESSION   WP_235957032
VERSION     WP_235957032.1
KEYWORDS    RefSeq.
SOURCE      Fundidesulfovibrio magnetotacticus
  ORGANISM  Fundidesulfovibrio magnetotacticus
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Fundidesulfovibrio.
REFERENCE   1  (residues 1 to 259)
  AUTHORS   Kelley,W.L.
  TITLE     The J-domain family and the recruitment of chaperone power
  JOURNAL   Trends Biochem Sci 23 (6), 222-227 (1998)
   PUBMED   9644977
REFERENCE   2  (residues 1 to 259)
  AUTHORS   Stubdal,H., Zalvide,J., Campbell,K.S., Schweitzer,C., Roberts,T.M.
            and DeCaprio,J.A.
  TITLE     Inactivation of pRB-related proteins p130 and p107 mediated by the
            J domain of simian virus 40 large T antigen
  JOURNAL   Mol Cell Biol 17 (9), 4979-4990 (1997)
   PUBMED   9271376
REFERENCE   3  (residues 1 to 259)
  AUTHORS   Pellecchia,M., Szyperski,T., Wall,D., Georgopoulos,C. and
            Wuthrich,K.
  TITLE     NMR structure of the J-domain and the Gly/Phe-rich region of the
            Escherichia coli DnaJ chaperone
  JOURNAL   J Mol Biol 260 (2), 236-250 (1996)
   PUBMED   8764403
REFERENCE   4  (residues 1 to 259)
  AUTHORS   Cyr,D.M., Langer,T. and Douglas,M.G.
  TITLE     DnaJ-like proteins: molecular chaperones and specific regulators of
            Hsp70
  JOURNAL   Trends Biochem Sci 19 (4), 176-181 (1994)
   PUBMED   8016869
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012451.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00226.36
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Fundidesulfovibrio magnetotacticus"
                     /db_xref="taxon:2730080"
     Protein         1..259
                     /product="DnaJ domain-containing protein"
                     /calculated_mol_wt=28753
     Region          5..54
                     /region_name="DnaJ"
                     /note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
                     protein 40) proteins are highly conserved and play crucial
                     roles in protein translation, folding, unfolding,
                     translocation, and degradation. They act primarily by
                     stimulating the ATPase activity of Hsp70s; cd06257"
                     /db_xref="CDD:99751"
     Region          7..258
                     /region_name="PRK14299"
                     /note="chaperone protein DnaJ; Provisional"
                     /db_xref="CDD:237667"
     Region          7..130
                     /region_name="DnaJ"
                     /note="DnaJ-class molecular chaperone with C-terminal Zn
                     finger domain [Posttranslational modification, protein
                     turnover, chaperones]; COG0484"
                     /db_xref="CDD:440252"
     Site            order(33..35,44,47..48,51..52)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
ORIGIN      
        1 mnvaeahkil glapdagpee lkksyrqlaf ryhpdlhpgd plakrkfqhl neaylllkqv
       61 maegppkaar rpdrdkeppk adpnakrkak aayskqaytk addpgdtktn yyfrredvlt
      121 dllkdsfarq vfediyrelh kpgaapgqtq aqdsasrtld iragksrlrm dlsgglmngl
      181 kgmllkqldd eqtvqvppts ilpgaklrvg vsqglsgesr tveftlpkdy tlgqpirlkg
      241 lgrrlgpwkg dlylrltlg
//
LOCUS       WP_235957082            1238 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase fold domain-containing protein [Paenibacillus
            apii].
ACCESSION   WP_235957082
VERSION     WP_235957082.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus apii
  ORGANISM  Paenibacillus apii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 1238)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019474.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07859.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1238
                     /organism="Paenibacillus apii"
                     /db_xref="taxon:1850370"
     Protein         1..1238
                     /product="alpha/beta hydrolase fold domain-containing
                     protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=132581
     Region          254..471
                     /region_name="BD-FAE"
                     /note="pfam20434"
                     /db_xref="CDD:466583"
     Region          375..>639
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          630..747
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
     Region          812..1152
                     /region_name="NosD"
                     /note="Nitrous oxide reductase accessory protein NosD,
                     contains tandem CASH domains [Inorganic ion transport and
                     metabolism]; COG3420"
                     /db_xref="CDD:442646"
ORIGIN      
        1 msnglrrkay rlgtsvllal vllcppfelq altsiyaaep sgdnvtlyee nfddpdnfgs
       61 vggvpipapw lqegeensla ktsvsstaps tpnlvkidgk dalalpvntt gygnlqlsyy
      121 trassyiggs iivewsddgg ttwttleefk lppgtleqkn sepnklkvqf lgsgannnpn
      181 vkvrfrvgel msanmyidsv aikaqaipgi ppaetpvpip ppvepqpfpv pegvelyedv
      241 ligtagtrsi ytsiavpktt phapmpvmvy ihgggwnhgd rkqalanicn yvtkrgyigv
      301 sldyrltpea pfpaqlqdvk lairylraha aeyhldpsri gvwgssaggh lasllgttgh
      361 mdsgetiald tghvvnvpdl dgtggwqeys dqvqavvdmy gpadfttkfa nsyssvtall
      421 ggnnafsvpd qarlampgty aspddppffi rhgdadatip ytdsvtfsnq lkdagvkvid
      481 vkivpgqghg ftgeaaeqas aeawafldqy vknrtaampt vhepdasndh vppswpdgss
      541 lktvnigtdf iqlawsaamd nqgigeyrvy qddellstvt datytvtglh pgtayafkvk
      601 avdlsgnasa plsfirstlt epivpyptvn vtasdsdgni atntidnnlf trwsaagnga
      661 wiqydlgesk sigylgvafy kgdlrttqfv ietsddgvmw tpgwsgassg rttemqpfdl
      721 pdtearyvri vglgnsdgsa ytslsevniy apfangdtpv asipnytpgp arepvpftap
      781 glteadgtvh pvhsphatsg rilnvlnfna dpadndtddg taiqaaidsa qpgdevylps
      841 gvynlnstld tlvslklksg vnlrgenqsk tilktsldkv rnsalmkvsg qhdlsisnlt
      901 ltstwngvyt tdhkvnnpda ggpdsmivia nfgevpsyni tvdqvnveky lrmgvridns
      961 rdivvrrstf rnatdlgpgg agygvsiqgl akqdrngyan dtlwnvveds rfegpylrhg
     1021 vliqfvahnn vlrnnqfvnt kldaidlhge leylneiygn visdiptgag iglgntggta
     1081 psnhsktgpr nyihdntirn treginvimg tpdtviernl ieyttliega kgirilngpg
     1141 tiikenviry ntasnywais lehdpgdska nnigegdpln vqlirnsltg ntngirllag
     1201 tgivlqgnlv dsigvnyfks eqvegvegwp sdsadgid
//
LOCUS       WP_235957107             212 aa            linear   BCT 02-MAR-2025
DEFINITION  histidine phosphatase family protein [Paenibacillus apii].
ACCESSION   WP_235957107
VERSION     WP_235957107.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus apii
  ORGANISM  Paenibacillus apii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 212)
  AUTHORS   Rigden,D.J.
  TITLE     The histidine phosphatase superfamily: structure and function
  JOURNAL   Biochem J 409 (2), 333-348 (2008)
   PUBMED   18092946
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012521.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00300.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Paenibacillus apii"
                     /db_xref="taxon:1850370"
     Protein         1..212
                     /product="histidine phosphatase family protein"
                     /calculated_mol_wt=22882
     Region          8..209
                     /region_name="HP"
                     /note="Histidine phosphatase domain found in a
                     functionally diverse set of proteins, mostly phosphatases;
                     contains a His residue which is phosphorylated during the
                     reaction; cl11399"
                     /db_xref="CDD:472174"
     Site            order(51..52,108,169)
                     /site_type="active"
                     /note="catalytic core [active]"
                     /db_xref="CDD:132716"
ORIGIN      
        1 mkrfvyfsml cfllmipaqm tgaaerafqa gpvnpsllds lrqggyilyv rhgeataged
       61 rpnldlrdcs tqrnlsgegr rqaeafgeai rrlhipvqsp vlagplcrtr etaelafgee
      121 nvqidpfwir iyrlsgdvtp sereaalaal tsilektpsp gtnqvivahs fpkgvglggi
      181 pnlgtvvvkp rgqgqgyeva grislaelpn ar
//
LOCUS       WP_235957127             586 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6382 domain-containing protein [Paenibacillus apii].
ACCESSION   WP_235957127
VERSION     WP_235957127.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus apii
  ORGANISM  Paenibacillus apii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039422.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19909.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Paenibacillus apii"
                     /db_xref="taxon:1850370"
     Protein         1..586
                     /product="DUF6382 domain-containing protein"
                     /calculated_mol_wt=65230
     Region          33..156
                     /region_name="DUF6382"
                     /note="Domain of unknown function (DUF6382); pfam19909"
                     /db_xref="CDD:466230"
     Region          495..583
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cd00060"
                     /db_xref="CDD:438714"
     Site            order(513..514,529..530,532,551..552)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:438714"
ORIGIN      
        1 mfgltrdfvq qdgirmvlgg regmpvsrln pvqcrmlssl tiphhlrlfl kevdlsvtle
       61 yavsgkklls hllkgvkltl defyglllqi aqgmedgrlh mlhpgqyalh edyifiegpl
      121 qrgkvyltyv plesiepvqs lgeslkrlim almpsvgelk gdgvqrllhy cgedeftvrg
      181 wkqlisellt dggerhpmah eetaaaakpl mgtgeypreq pfrekfpdka vhkfadngqk
      241 tpaqrigpiv nngffgrsgs padspeasrd kasplaewms gsaffqgrqe ndkregdker
      301 gwqeedrmep gsvsgtlqsg kdghspkkty illgcvllda llwkylyldh pgrlalilcg
      361 iatlllialn gliwarklga dpveeketee eqdvrgpefg msrgfgtlqt sigrkreklg
      421 gfqrfnpapi dpnkrvmagi hefewdgaei eaaedypnaa vsdpatmlls neqapaseqa
      481 klregavpyl erreegsenp ekielnrtsf iigrspevaq ymeasegasr vhaeifrsgg
      541 gyvlkdldsr ngtrfqgeam vpykeypltd gdvftiikgn ytfhqr
//
LOCUS       WP_235956780             178 aa            linear   BCT 02-MAR-2025
DEFINITION  ERCC4 domain-containing protein [Fundidesulfovibrio
            magnetotacticus].
ACCESSION   WP_235956780
VERSION     WP_235956780.1
KEYWORDS    RefSeq.
SOURCE      Fundidesulfovibrio magnetotacticus
  ORGANISM  Fundidesulfovibrio magnetotacticus
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae;
            Fundidesulfovibrio.
REFERENCE   1  (residues 1 to 178)
  AUTHORS   Steczkiewicz,K., Muszewska,A., Knizewski,L., Rychlewski,L. and
            Ginalski,K.
  TITLE     Sequence, structure and functional diversity of PD-(D/E)XK
            phosphodiesterase superfamily
  JOURNAL   Nucleic Acids Res 40 (15), 7016-7045 (2012)
   PUBMED   22638584
REFERENCE   2  (residues 1 to 178)
  AUTHORS   Gaillard,P.H.L., Noguchi,E., Shanahan,P. and Russell,P.
  TITLE     The endogenous Mus81-Eme1 complex resolves Holliday junctions by a
            nick and counternick mechanism
  JOURNAL   Mol Cell 12 (3), 747-759 (2003)
   PUBMED   14527419
REFERENCE   3  (residues 1 to 178)
  AUTHORS   Boddy,M.N., Gaillard,P.H.L., McDonald,W.H., Shanahan,P., Yates,J.R.
            3rd and Russell,P.
  TITLE     Mus81-Eme1 are essential components of a Holliday junction
            resolvase
  JOURNAL   Cell 107 (4), 537-548 (2001)
   PUBMED   11719193
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02732.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Fundidesulfovibrio magnetotacticus"
                     /db_xref="taxon:2730080"
     Protein         1..178
                     /product="ERCC4 domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /calculated_mol_wt=19931
     Region          8..>64
                     /region_name="PDDEXK_nuclease-like"
                     /note="PDDEXK family nucleases; cl40440"
                     /db_xref="CDD:477358"
     Region          10..127
                     /region_name="ERCC4"
                     /note="ERCC4 domain; pfam02732"
                     /db_xref="CDD:426945"
ORIGIN      
        1 mnaatlslvv dtreqapygf erfpgvelvr aglptgdysl aghesraaie rkslddligc
       61 lttgrerfer eleraraldc favvveasme dvargrftsr mnphaalqsv lafqvrygcp
      121 fvwagsrrgg eyvtfwmlqk fqrehearqd eaqavaelee igrcrggkkp krqeakhv
//
LOCUS       WP_235957306             405 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramoyl-L-alanine amidase [Paenibacillus apii].
ACCESSION   WP_235957306
VERSION     WP_235957306.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus apii
  ORGANISM  Paenibacillus apii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 405)
  AUTHORS   Kuroda,A., Sugimoto,Y., Funahashi,T. and Sekiguchi,J.
  TITLE     Genetic structure, isolation and characterization of a Bacillus
            licheniformis cell wall hydrolase
  JOURNAL   Mol Gen Genet 234 (1), 129-137 (1992)
   PUBMED   1495475
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013670.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01520.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Paenibacillus apii"
                     /db_xref="taxon:1850370"
     Protein         1..405
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /EC_number="3.5.1.28"
                     /GO_function="GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=42375
     Region          57..197
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          210..388
                     /region_name="AmiC"
                     /note="N-acetylmuramoyl-L-alanine amidase [Cell
                     wall/membrane/envelope biogenesis]; COG0860"
                     /db_xref="CDD:440621"
ORIGIN      
        1 mnkhihsfpg fgpdnrdrgn rsekrsgfaa lkrlawlaag msvtilglal ssytvradsy
       61 takvyatsln vrsepangaa vkgsvkggsl vtvteeqhgw arisagnmtg wvagyylkka
      121 ggsaasaqts gtlpktlaag ggrstatvta dslrirsgpg tgyeavgslk ardvvtvlsr
      181 rsgwlsirtp sgaagwiaep yvtagsspsa agvrpvnasr stsaglrgkr ivvdpghggd
      241 dpgmigttfg tmekdlnlqt alylrdylta agadvtmtrt rgdqrpslss rarlapevsa
      301 dafisvhyns spkkisgtlt ffysesddlm larsiehrlg dgiglksngv sfgdyhilre
      361 netpaalvel gfltspgdes lvrktsyqkk aakaiakgia dyfsn
//
LOCUS       WP_235957420             480 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein [Sphingopyxis microcysteis].
ACCESSION   WP_235957420
VERSION     WP_235957420.1
KEYWORDS    RefSeq.
SOURCE      Sphingopyxis microcysteis
  ORGANISM  Sphingopyxis microcysteis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingopyxidaceae; Sphingopyxis.
REFERENCE   1  (residues 1 to 480)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Sphingopyxis microcysteis"
                     /db_xref="taxon:2484145"
     Protein         1..480
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=49430
     Region          25..477
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     Site            order(154..158,166,181,183..184,232..235,238,241..242,
                     254..256,288,382,384,410,449)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143395"
     Site            order(158,254,285,288)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143395"
ORIGIN      
        1 mmhvafdsgr sllidgrwea aaatmavvnp wsgaalaeva cadighvera vasavegaea
       61 mralstgara rilhdtalal egdaarfaaa itaetgkpir saarevarav ntlrlsaeea
      121 trlagetiaf dsfpggears ghyileplgv iaaitpfndp lnlichklgp algagnavvl
      181 kpaeqaplva mmlarlllaa glpggalqll tgrgrdfgda ltghpdvamv sftggvgvgq
      241 aitraagikr lamelggngp vivmddadia raadacaaga fgaagqncig vqriyvhdaa
      301 ydafrdalva rmgrlrvgdp tdpatdvgpm isaaqaeriv awtaeavaqg atvlaggera
      361 gtlvrptlla gvaddariac deafgpvasl frftdldaai daanradyai haaiftesir
      421 harhaarrlr vagvmindst dyrldampfg gagrgnmgre garfamrems qtkvicfhda
//
LOCUS       WP_235957432             484 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4403 family protein [Sphingopyxis microcysteis].
ACCESSION   WP_235957432
VERSION     WP_235957432.1
KEYWORDS    RefSeq.
SOURCE      Sphingopyxis microcysteis
  ORGANISM  Sphingopyxis microcysteis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingopyxidaceae; Sphingopyxis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025714.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14356.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Sphingopyxis microcysteis"
                     /db_xref="taxon:2484145"
     Protein         1..484
                     /product="DUF4403 family protein"
                     /calculated_mol_wt=52790
     Region          35..471
                     /region_name="DUF4403"
                     /note="Domain of unknown function (DUF4403); pfam14356"
                     /db_xref="CDD:464146"
ORIGIN      
        1 maiasgsmlt acdrkvdvep pprstdkaps psqksliavp inadtsalkr aleravprtl
       61 wtinrrerac vkpqrvkvfg kkvkvtppia ctivgrvtrg alrlrgvgde iivdvplnat
      121 iaardvggvl kgetatgaam aharvridvt pdwrtrgtar isygwtkapg idflgkritf
      181 tdeadaklkp vvrdverevn reiaridirk qasdvwrqsf talelnrenp pvwmrvtpqr
      241 ilyggyrmeg qqmrlnlgle aitetfvsgr padpaptplp tmvrekptph fdvrvpvlad
      301 yaqlqpvvdr alkkrsarpf dlpkvgpmmv kfgpstiyga pdgrvalgvd vamrlasrsg
      361 epthgriwmt avpvnnpgsa evrftdllit gdtdgvggdv lialgqnpgf apliadaltq
      421 nftrdlgelq gkikravdqr regafvirtq idgfeigaik aygnglylpv rmvggarvdy
      481 rpar
//
LOCUS       WP_235957464             161 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Sphingopyxis microcysteis].
ACCESSION   WP_235957464
VERSION     WP_235957464.1
KEYWORDS    RefSeq.
SOURCE      Sphingopyxis microcysteis
  ORGANISM  Sphingopyxis microcysteis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingopyxidaceae; Sphingopyxis.
REFERENCE   1  (residues 1 to 161)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Sphingopyxis microcysteis"
                     /db_xref="taxon:2484145"
     Protein         1..161
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=16926
     Region          27..>106
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
ORIGIN      
        1 mhsasgrvma plkgvsmlfa srpscikrll iieddplvaf dnertlkhsg ydivatvdsg
       61 eaavpiiaae qidalvldlg laghmtgrev arlardrgia vllvtgqcpd dagdiavarl
      121 skphsasalv aalravesis cqnkmprkvs glttywrpea a
//
LOCUS       WP_235957644             501 aa            linear   BCT 02-MAR-2025
DEFINITION  M28 family peptidase [Sphingopyxis microcysteis].
ACCESSION   WP_235957644
VERSION     WP_235957644.1
KEYWORDS    RefSeq.
SOURCE      Sphingopyxis microcysteis
  ORGANISM  Sphingopyxis microcysteis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingopyxidaceae; Sphingopyxis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016289.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04389.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Sphingopyxis microcysteis"
                     /db_xref="taxon:2484145"
     Protein         1..501
                     /product="M28 family peptidase"
                     /calculated_mol_wt=51881
     Region          129..243
                     /region_name="PA"
                     /note="Protease-associated (PA) domain. The PA domain is
                     an insert domain in a diverse fraction of proteases. The
                     significance of the PA domain to many of the proteins in
                     which it is inserted is undetermined. It may be a
                     protein-protein interaction domain. At...; cl28883"
                     /db_xref="CDD:333703"
     Site            195..197
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:238300"
     Region          267..500
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mkiihfraai aavalvtcvp aaaaaapaka dppvteaqla ahikiladda fegrapgtdg
       61 edrtiayivg ewakaglqav pgsatpwlqp ipfvesravs gtarfkvhgr dfaieddgii
      121 ltgreasaal tnvpavfvgy gvdgtgkvna dvagklaiml fdnapfgdkl pryrerrqll
      181 adagaaavlv iatdavpwaq lhdsagatsm rladakpaap vsgflsleaa dallakagqd
      241 ggtlreaaks pdyrgavlpv sadlttqsai rpfisnnvia klpgakpdgk avlflghwdh
      301 lgicgdegea dricngavdn asgiavliev akrlasgarp drdiyflatt aeekgllgar
      361 yfadhpvvpl tnitvalnvd tiaisprgtp vatigrgqpa ydavvrqvat klgrkldedg
      421 eadafiqrqd gwalgakgvt slmvggsfsd mplleaflss dyhgpndnfs dkiplggaae
      481 dadlhvglgr afadvkawpg k
//
LOCUS       WP_235958020             323 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase [Salipiger sp. PrR003].
ACCESSION   WP_235958020
VERSION     WP_235958020.1
KEYWORDS    RefSeq.
SOURCE      Salipiger sp. PrR003
  ORGANISM  Salipiger sp. PrR003
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 323)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 323)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Salipiger sp. PrR003"
                     /db_xref="taxon:2706776"
     Protein         1..323
                     /product="phosphotransferase"
                     /calculated_mol_wt=34783
     Region          82..288
                     /region_name="Bud32"
                     /note="tRNA A-37 threonylcarbamoyl transferase component
                     Bud32 [Translation, ribosomal structure and biogenesis];
                     COG3642"
                     /db_xref="CDD:442859"
ORIGIN      
        1 miagdlaqaa mahwpvlare igldpaswra aplarredar varillrlqg pggarlvlky
       61 earpadpekf aaamaahlav qevyaqgvpe lltfdverrt cvmgyldarp lsgllegapl
      121 saqaallrra ggwlggfhra lpgetrvfqp khtvgflrsv meevssgari vaepqrflsc
      181 aealcadqvl yegretitaq thgdlhlrnl vldeagcwgl dfaggrvvpv ghdiarllad
      241 yailhapkda ipdrevlppe vqgaffegyg lvgaqdpsve lllrnrvlae wwglpagaed
      301 rgpaqarrwa gvqalagrvf pgr
//
LOCUS       WP_235958105             657 aa            linear   BCT 02-MAR-2025
DEFINITION  FKBP-type peptidyl-prolyl cis-trans isomerase N-terminal
            domain-containing protein [Serratia marcescens].
ACCESSION   WP_235958105
VERSION     WP_235958105.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 657)
  AUTHORS   Saul,F.A., Arie,J.P., Vulliez-le Normand,B., Kahn,R., Betton,J.M.
            and Bentley,G.A.
  TITLE     Structural and functional studies of FkpA from Escherichia coli, a
            cis/trans peptidyl-prolyl isomerase with chaperone activity
  JOURNAL   J Mol Biol 335 (2), 595-608 (2004)
   PUBMED   14672666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013509.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01346.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         1..657
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase
                     N-terminal domain-containing protein"
                     /GO_process="GO:0006457 - protein folding [Evidence IEA]"
                     /calculated_mol_wt=72504
     Region          <71..>249
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          <162..>443
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          418..653
                     /region_name="PRK10902"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     Provisional"
                     /db_xref="CDD:236791"
ORIGIN      
        1 mtprarkall slmiplafap avaaadddvp allqfaeryq rqdapaadtv vtpsretqkp
       61 asrpiqiret aaqrkqltql qkalreketr leqqqaaiqs lqqeltalrv assltaadkp
      121 apapdlsals dfasgvrqal nltpqerkaq aqiaeaqaal arqkqqtaer drrialleqr
      181 laalpkpaen vrqqvweekl aaaqtandka rqryeqdkka aaaelerqka eaakltgelq
      241 rqlaqlqkeq dvqrqqegqq ekslktalaq qqaeaakltg elqrqlaqlq keqdvqrqqa
      301 ekqeknlkma leqqktetak atgelqqqla alqkerddqr qqaeqqensl kaalakqaie
      361 aakateelqr qlaqlqeknk tqteqaktle qrlaavtaes aqaaqkrdea tqradktaae
      421 lavahqaqqa lqdelsglrs rakwlpevkt lkkkpeqqsy aagvalgrdi qtmlaerknw
      481 gitpdktvll agvidtfngh yqlsdaqltr alaesekavn darsqaakrq tskgeafvae
      541 fkkkkgtqks pagfwyridy agdetiaena rvdivvkesl tdgsviqdmd rsgkvmsqpl
      601 saypplfrea ighlknhgsl tmvvppelay getgyapqip pnatmvyelr ivdagng
//
LOCUS       WP_235958108             111 aa            linear   BCT 02-MAR-2025
DEFINITION  T6SS amidase immunity protein Tai4 family protein [Serratia
            marcescens].
ACCESSION   WP_235958108
VERSION     WP_235958108.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 111)
  AUTHORS   Zhang,H., Zhang,H., Gao,Z.Q., Wang,W.J., Liu,G.F., Xu,J.H., Su,X.D.
            and Dong,Y.H.
  TITLE     Structure of the type VI effector-immunity complex (Tae4-Tai4)
            provides novel insights into the inhibition mechanism of the
            effector by its immunity protein
  JOURNAL   J Biol Chem 288 (8), 5928-5939 (2013)
   PUBMED   23288853
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028005.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16695.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         1..111
                     /product="T6SS amidase immunity protein Tai4 family
                     protein"
                     /calculated_mol_wt=12179
     Region          24..104
                     /region_name="Tai4"
                     /note="Type VI secretion system (T6SS), amidase immunity
                     protein; pfam16695"
                     /db_xref="CDD:435522"
ORIGIN      
        1 mslllgshvv laenslnals qealyknwlv srcigkstdl ektkqdafrs asaylelskl
       61 pmdafeqgek laeqyankns qgsvkgsyhi ldclslqsss eakaiferys k
//
LOCUS       WP_235958236             244 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: response regulator [Roseobacteraceae].
ACCESSION   WP_235958236
VERSION     WP_235958236.1
KEYWORDS    RefSeq.
SOURCE      Roseobacteraceae
  ORGANISM  Roseobacteraceae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales.
REFERENCE   1  (residues 1 to 244)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Roseobacteraceae"
                     /db_xref="taxon:2854170"
     Protein         1..244
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=25746
     Region          28..>159
                     /region_name="AtoC"
                     /note="DNA-binding transcriptional response regulator,
                     NtrC family, contains REC, AAA-type ATPase, and a Fis-type
                     DNA-binding domains [Signal transduction mechanisms];
                     COG2204"
                     /db_xref="CDD:441806"
ORIGIN      
        1 mtdsdmtdsn rntpfpprpt atrpllgmti lavedsryac dalrlmalrs garirradcl
       61 qaarrhlsly rptvavidlg lpdgsgagli aelvarsprl pvilgisgdp faenmlraag
      121 adgflekplr sllafqnaii aalpdsrkpg girlvsddpi tpdplayqdd iahaaallqe
      181 agepgladyi aqflaglars agdsaleaaa ralaaaraer rpttqaltql sallhqrmat
      241 riai
//
LOCUS       WP_235958243            1056 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1553 domain-containing protein [Flammeovirga agarivorans].
ACCESSION   WP_235958243
VERSION     WP_235958243.1
KEYWORDS    RefSeq.
SOURCE      Flammeovirga agarivorans
  ORGANISM  Flammeovirga agarivorans
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Flammeovirgaceae; Flammeovirga.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019223.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07587.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Flammeovirga agarivorans"
                     /db_xref="taxon:2726742"
     Protein         1..1056
                     /product="DUF1553 domain-containing protein"
                     /calculated_mol_wt=120864
     Region          30..93
                     /region_name="PSCyt1"
                     /note="Planctomycete cytochrome C; pfam07635"
                     /db_xref="CDD:429568"
     Region          143..349
                     /region_name="PSCyt2"
                     /note="Protein of unknown function (DUF1549); pfam07583"
                     /db_xref="CDD:429550"
     Region          466..640
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          749..1001
                     /region_name="PSD1"
                     /note="Protein of unknown function (DUF1553); pfam07587"
                     /db_xref="CDD:429553"
ORIGIN      
        1 mpekvkkayq eipyelvfnq dikpilsdkc fachgpdngk ikgglqlhsf eaataelkes
       61 kgkfailpgn pnnsemikri lsedpsqvmp tpeshlslsd yekavlikwv eegakyephw
      121 aftpvskpek ihsnnskwer nfidyyiskk lnekglspsk eankqlllrr lsldltglpp
      181 tteeieyfln dssenayekq vdrlltsphy gekmatdwmd varyadthgy qidrlrdmsp
      241 wrdwvikafn snkpydefit eqlagdllkk atkeqilatg fnrlhpqnae ggivdeefrv
      301 eyvadrtavl gqgimgmtia carchdhkyd pisqknyyel fsffnninet gqiswdagdm
      361 pvptlllpne eqeevisflk svcdssllek qtitkaeikp asqwikdeky qgisqgsinh
      421 qkvaefqlnn slintlngkv gkmdrqfskk eipnftngky nkgllldgda widlapigiy
      481 drhdpfsisl wikipqnfke gvlfhknkav mlhsmkgytl yvkdeklqvi mahtypenai
      541 iktsknkvpk dewihitltn dgtskakgvq lyvnglqqvm dveqdnlfks iifnnyedii
      601 ysspiepglq igarwrglga kgcsvdqiev fsrnitqlei lqlsdlkkwk qlirkkpsll
      661 skeerkvlqq yylqrksrkl nqvnkkflak qkqlnqttdt lpevmvmkem deprqayile
      721 rgvydnygek vypntplsil efpdeyprnr lglaqwlthp khpltarvav nrywqnffgk
      781 givettedfg nqgklpthpk lldhlaysfm qdnwdvkslh kamvmsstyr qssignqmlk
      841 ekdpnndwla rgpqfrltse mmrdnaltas glintkiggk svfpyqpdgl wsmnankyeq
      901 stgndlyrrs lytvwkrtvp nptqstfdqp drsectvrrq ktntplqalv llndptfiei
      961 srklgeeisn qitlddgisk vylkltgkni ssteltllke vhqkeklrfs nspdkmkgwl
     1021 ssgqyqiskd aeaptviana iiasiilnsd atitrr
//
LOCUS       WP_235958381             418 aa            linear   BCT 02-MAR-2025
DEFINITION  chloride channel protein [Limosilactobacillus frumenti].
ACCESSION   WP_235958381
VERSION     WP_235958381.1
KEYWORDS    RefSeq.
SOURCE      Limosilactobacillus frumenti
  ORGANISM  Limosilactobacillus frumenti
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Limosilactobacillus.
REFERENCE   1  (residues 1 to 418)
  AUTHORS   Mindell,J.A. and Maduke,M.
  TITLE     ClC chloride channels
  JOURNAL   Genome Biol 2 (2), REVIEWS3003 (2001)
   PUBMED   11182894
REFERENCE   2  (residues 1 to 418)
  AUTHORS   Schmidt-Rose,T. and Jentsch,T.J.
  TITLE     Reconstitution of functional voltage-gated chloride channels from
            complementary fragments of CLC-1
  JOURNAL   J Biol Chem 272 (33), 20515-20521 (1997)
   PUBMED   9252364
REFERENCE   3  (residues 1 to 418)
  AUTHORS   Zhang,J., George,A.L. Jr., Griggs,R.C., Fouad,G.T., Roberts,J.,
            Kwiecinski,H., Connolly,A.M. and Ptacek,L.J.
  TITLE     Mutations in the human skeletal muscle chloride channel gene
            (CLCN1) associated with dominant and recessive myotonia congenita
  JOURNAL   Neurology 47 (4), 993-998 (1996)
   PUBMED   8857733
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012861.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00654.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Limosilactobacillus frumenti"
                     /db_xref="taxon:104955"
     Protein         1..418
                     /product="chloride channel protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA]"
                     /GO_process="GO:0006821 - chloride transport [Evidence
                     IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44451
     Region          18..412
                     /region_name="Voltage_gated_ClC"
                     /note="CLC voltage-gated chloride channel. The ClC
                     chloride channels catalyse the selective flow of Cl- ions
                     across cell membranes, thereby regulating electrical
                     excitation in skeletal muscle and the flow of salt and
                     water across epithelial barriers. This...; cl02915"
                     /db_xref="CDD:445960"
     Site            order(83..87,118..122,328..332)
                     /site_type="active"
                     /note="Cl- selectivity filter [active]"
                     /db_xref="CDD:238233"
     Site            order(84,86,120..121,328..330)
                     /site_type="other"
                     /note="Cl- binding residues [ion binding]"
                     /db_xref="CDD:238233"
     Site            120
                     /site_type="active"
                     /note="pore gating glutamate residue [active]"
                     /db_xref="CDD:238233"
     Site            order(171,180,197,204,374,377,385,394,401..402)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238233"
ORIGIN      
        1 metksknsam vvatlvlgvi vgfsslllsv lldvterffl nfeetnlvpv dvnagamhrf
       61 isvliggiia aiiwyylqrh yrpvklgkav dgqkmplvkt lihvctqiff vgtgnsigre
      121 lapreagaaw aqkweevtak ypalqltaed rkmlvaaaag agfagvyiap itgavfciel
      181 lykkinarvi avsltmstia tligsivkgy kpyylvgsnn fhlqllplvv llgplsgllg
      241 tifkkyiaka kahrvrnini miqlpvvaai tggiaafypq imgngrglaq lamstnshsq
      301 kvilallfgl vakvlvtlfv mkcggyggvl tpsiaagavi gafagmayia fvpgvtiaqv
      361 avlgaaffla asqqaplmal fmlfevchln fsallplamg vglsiaiskw lqtksffk
//
LOCUS       WP_235958395             570 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase [Limosilactobacillus frumenti].
ACCESSION   WP_235958395
VERSION     WP_235958395.1
KEYWORDS    RefSeq.
SOURCE      Limosilactobacillus frumenti
  ORGANISM  Limosilactobacillus frumenti
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Limosilactobacillus.
REFERENCE   1  (residues 1 to 570)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 570)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Limosilactobacillus frumenti"
                     /db_xref="taxon:104955"
     Protein         1..570
                     /product="phosphotransferase"
                     /calculated_mol_wt=66657
     Region          1..>42
                     /region_name="HTH_CRP"
                     /note="helix_turn_helix, cAMP Regulatory protein
                     C-terminus; DNA binding domain of prokaryotic regulatory
                     proteins belonging to the catabolite activator protein
                     family; cl46859"
                     /db_xref="CDD:481199"
     Site            order(9,11..13,22)
                     /site_type="other"
                     /note="non-specific DNA interactions [nucleotide binding]"
                     /db_xref="CDD:238044"
     Site            22..28
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238044"
     Site            order(23..24,28)
                     /site_type="other"
                     /note="sequence specific DNA binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238044"
     Site            23..24
                     /site_type="other"
                     /note="putative cAMP binding site [chemical binding]"
                     /db_xref="CDD:238044"
     Region          61..275
                     /region_name="LicC"
                     /note="CTP:phosphocholine cytidylyltransferase LicC [Cell
                     wall/membrane/envelope biogenesis, Lipid transport and
                     metabolism]; COG4750"
                     /db_xref="CDD:443784"
     Region          300..496
                     /region_name="ChoK-like"
                     /note="Choline Kinase and similar proteins; cd05151"
                     /db_xref="CDD:270700"
     Site            order(306,308..311,313,324,326,355,369..372,373..374,456,
                     458,460..461,463,473..474,477,493)
                     /site_type="active"
                     /db_xref="CDD:270700"
     Site            order(306,311,313,324,326,355,369..372,373..374,460,463,
                     473..474)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270700"
     Site            order(308..310,456,458,461,477,493)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:270700"
     Site            order(339,342..343,346..347,357..360,448)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:270700"
     Region          395..555
                     /region_name="CotS"
                     /note="Thiamine kinase or a related kinase [Coenzyme
                     transport and metabolism]; COG0510"
                     /db_xref="CDD:440276"
ORIGIN      
        1 mqlklrnpdi tqrelakelg mslgktnhvl nelkqtglvd aqfaltstgr eyitshhpqq
       61 avilaagfgm rmvpinteep kgllevnqep lierlikqlh sknirkiyiv vgfmkehyey
      121 lidkydvqli vnphyhewnn iyslylakeh lnnsyvvpcd iwlknnpfse vedqpwymfs
      181 dhqhedshwk vtnrgtikyv gaggnkmvgi aylnaetgnr vkqeldkris qqsrldefwe
      241 slliggdrfk lnsylikdnq faeinsyeel rnldsnsdhl rndaiqaivn tlgvknteih
      301 dirvlkkgmt nrsfifdcqg dqyimripga gtkelinrqq eydvyqvikd lpyveqtlyl
      361 npengykltk fikhshncdp nnwkevqqsm rllnkmhash lkvdhtfdlr aqinmyeklr
      421 kapsayrdya gvkrridqll nyvdqldkdw tlchidanad nfvfdrngne flidweyagm
      481 qdpdvdvamf aiysmynqeq idhlidiyfg kstsqqnkik iyayiaicgl lwsnwceykq
      541 slgldfgeys laqyryakey skkvlkylkg
//
LOCUS       WP_235958067              88 aa            linear   BCT 02-MAR-2025
DEFINITION  colicin immunity domain-containing protein [Serratia marcescens].
ACCESSION   WP_235958067
VERSION     WP_235958067.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 88)
  AUTHORS   Graille,M., Mora,L., Buckingham,R.H., van Tilbeurgh,H. and de
            Zamaroczy,M.
  TITLE     Structural inhibition of the colicin D tRNase by the tRNA-mimicking
            immunity protein
  JOURNAL   EMBO J 23 (7), 1474-1482 (2004)
   PUBMED   15014439
REFERENCE   2  (residues 1 to 88)
  AUTHORS   Soelaiman,S., Jakes,K., Wu,N., Li,C. and Shoham,M.
  TITLE     Crystal structure of colicin E3: implications for cell entry and
            ribosome inactivation
  JOURNAL   Mol Cell 8 (5), 1053-1062 (2001)
   PUBMED   11741540
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020766.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09204.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         1..88
                     /product="colicin immunity domain-containing protein"
                     /GO_function="GO:0015643 - toxic substance binding
                     [Evidence IEA]"
                     /GO_process="GO:0030153 - bacteriocin immunity [Evidence
                     IEA]"
                     /calculated_mol_wt=10045
     Region          6..84
                     /region_name="Colicin_immun"
                     /note="Bacterial self-protective colicin-like immunity;
                     pfam09204"
                     /db_xref="CDD:401227"
ORIGIN      
        1 msgmrfvelg kefvenkisa egfsesivke rrklygyeek dkqvdkcsge lfiladcynp
       61 asdraeseld evelkkevit vlkkfnfi
//
LOCUS       WP_235958700             403 aa            linear   BCT 02-MAR-2025
DEFINITION  histidine kinase [Actinomadura macrotermitis].
ACCESSION   WP_235958700
VERSION     WP_235958700.1
KEYWORDS    RefSeq.
SOURCE      Actinomadura macrotermitis
  ORGANISM  Actinomadura macrotermitis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Thermomonosporaceae; Actinomadura.
REFERENCE   1  (residues 1 to 403)
  AUTHORS   Grebe,T.W. and Stock,J.B.
  TITLE     The histidine protein kinase superfamily
  JOURNAL   Adv Microb Physiol 41, 139-227 (1999)
   PUBMED   10500846
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019350.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07730.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Actinomadura macrotermitis"
                     /db_xref="taxon:2585200"
     Protein         1..403
                     /product="histidine kinase"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=42970
     Region          <52..175
                     /region_name="Yip1"
                     /note="Yip1 domain; pfam04893"
                     /db_xref="CDD:461468"
     Region          161..396
                     /region_name="ComP"
                     /note="Signal transduction histidine kinase ComP [Signal
                     transduction mechanisms]; COG4585"
                     /db_xref="CDD:443642"
ORIGIN      
        1 mdtatsaele ardarrlsny rqvtyrsflf agagflgpcl aaliqpysdg rigvpllvag
       61 laglvvmgwc yhrlvkralg ggvtrrdvla sgavafaltl mmfsnplwct vplvwssala
      121 lspmdrrrla alclgtsavv tavgtaaaph wgdggtrpww aapvmfaiyt avsafviyin
      181 ryqrrmwdlh qeahaareal arvavteerl rfsrdlhdll ghslsliavk selairlaea
      241 dpdraraema dvrraardal revraavrgy raveldaela gvravleaag vrcetgplpd
      301 glpaearavl awviregatn iikhsearrc aitltpyggg vvlemdndgv rgasadpgtg
      361 laglteriav vggtltarrh grdgfllrat vpvpdpvpag spa
//
LOCUS       WP_235958819             156 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1572 family protein [Paenibacillus silvestris].
ACCESSION   WP_235958819
VERSION     WP_235958819.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus silvestris
  ORGANISM  Paenibacillus silvestris
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019241.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07609.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Paenibacillus silvestris"
                     /db_xref="taxon:2606219"
     Protein         1..156
                     /product="DUF1572 family protein"
                     /calculated_mol_wt=18009
     Region          14..152
                     /region_name="MDMPI_N"
                     /note="Mycothiol maleylpyruvate isomerase N-terminal
                     domain; cl21506"
                     /db_xref="CDD:473890"
ORIGIN      
        1 mrkykadqkw trivieqlse ediswsptpe snsiinliah isgaarywfd aayfgaplne
       61 yrsiefergl qmskdqalei skksydciia viemmkanpe rlleqpylny ppfdsaglnn
      121 qstvlemllh qfrhlpshtg qiiyiakmrk gnlvwe
//
LOCUS       WP_235959121             785 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Paenibacillus
            silvestris].
ACCESSION   WP_235959121
VERSION     WP_235959121.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus silvestris
  ORGANISM  Paenibacillus silvestris
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Paenibacillus silvestris"
                     /db_xref="taxon:2606219"
     Protein         1..785
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=89708
     Region          41..247
                     /region_name="dCache_1"
                     /note="Cache domain; pfam02743"
                     /db_xref="CDD:460673"
     Region          <450..533
                     /region_name="GGDEF_2"
                     /note="GGDEF-like domain; pfam17853"
                     /db_xref="CDD:465533"
     Region          699..782
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
ORIGIN      
        1 mnigflwrkr ksiiftwlis ysavlfipmm msliiysqss nalkseihra ndsllkqvry
       61 tidaqidlmk rlnmeitwna klqslmysni rqsddqflaf qlvkefrmyq tsyamidefy
      121 vtwdqtssil rpgnvrdmkt afdtihntgt lryeqwldti nnaannqfll lphtdaespq
      181 tsiayiahlp kdlngkqtgt vvvmadlerf qkametisgf sggqililnh dnqvllsnlp
      241 vsvntnlile qaldpdhvay sqaangdsel fymqsavsdl kyvlvipsgi ywekaeyvrn
      301 ftyvsilisl igacvltwff mrrnyspiqr lvqslsdkhs aeertdgnel sfiqrvisdt
      361 rsekdqielq wqshqyvlrs nmlnrllkgk idtlisyeea fksfdmelvs nefavilfav
      421 enneklssnl pgmdlnerrk liqfiitnvv eelvghrhha gyvaevddmm vclvnfaena
      481 aaerkedlsw iaseaqrfll ryhmdltisi ggihsslfgv aqayrealda meykmvrgks
      541 eiitydeiri dsadklqlgy yyplqveqqi inlikigdye sasasmseim ernfnkplvs
      601 ltlarclifn lvgtmvkain elgdgdsrll gdnplwmdsi iacdtilemq qellallkev
      661 cahaaakigs nsskeraetl relianvtry iedhyqdanl nvntigerfe lkgsyvsklf
      721 kdgtgeglld yitkfriqqa krmigykqds iseiaksvgy nevatfirvf kkyegitpgk
      781 ykemh
//
LOCUS       WP_235959360              41 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6254 family protein [Paenibacillus silvestris].
ACCESSION   WP_235959360
VERSION     WP_235959360.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus silvestris
  ORGANISM  Paenibacillus silvestris
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040037.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19767.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..41
                     /organism="Paenibacillus silvestris"
                     /db_xref="taxon:2606219"
     Protein         1..41
                     /product="DUF6254 family protein"
                     /calculated_mol_wt=4626
     Region          1..36
                     /region_name="DUF6254"
                     /note="Family of unknown function (DUF6254); pfam19767"
                     /db_xref="CDD:437599"
ORIGIN      
        1 msqskrreea awksrkqarh phgkvkslae faseydagrn k
//
LOCUS       WP_235959423             157 aa            linear   BCT 02-MAR-2025
DEFINITION  type II secretion system F family protein [Actinomadura
            macrotermitis].
ACCESSION   WP_235959423
VERSION     WP_235959423.1
KEYWORDS    RefSeq.
SOURCE      Actinomadura macrotermitis
  ORGANISM  Actinomadura macrotermitis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Thermomonosporaceae; Actinomadura.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Desvaux,M., Hebraud,M., Talon,R. and Henderson,I.R.
  TITLE     Secretion and subcellular localizations of bacterial proteins: a
            semantic awareness issue
  JOURNAL   Trends Microbiol 17 (4), 139-145 (2009)
   PUBMED   19299134
REFERENCE   2  (residues 1 to 157)
  AUTHORS   Desvaux,M., Parham,N.J., Scott-Tucker,A. and Henderson,I.R.
  TITLE     The general secretory pathway: a general misnomer?
  JOURNAL   Trends Microbiol 12 (7), 306-309 (2004)
   PUBMED   15223057
REFERENCE   3  (residues 1 to 157)
  AUTHORS   Peabody,C.R., Chung,Y.J., Yen,M.R., Vidal-Ingigliardi,D.,
            Pugsley,A.P. and Saier,M.H.
  TITLE     Type II protein secretion and its relationship to bacterial type IV
            pili and archaeal flagella
  JOURNAL   Microbiology (Reading) 149 (Pt 11), 3051-3072 (2003)
   PUBMED   14600218
REFERENCE   4  (residues 1 to 157)
  AUTHORS   Py,B., Loiseau,L. and Barras,F.
  TITLE     An inner membrane platform in the type II secretion machinery of
            Gram-negative bacteria
  JOURNAL   EMBO Rep 2 (3), 244-248 (2001)
   PUBMED   11266368
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012694.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00482.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Actinomadura macrotermitis"
                     /db_xref="taxon:2585200"
     Protein         1..157
                     /product="type II secretion system F family protein"
                     /calculated_mol_wt=15898
     Region          <7..151
                     /region_name="TadC"
                     /note="Flp pilus assembly protein TadC [Extracellular
                     structures]; COG2064"
                     /db_xref="CDD:441667"
ORIGIN      
        1 mgdaetrrrr arlvadlpvg vdllaaclrg gtpwseavea vaeavggplg edlhgvavri
       61 rlgvdpavaw laladepmla plartavrat rsgaalaptl arlardqrrt agaaaaarar
      121 aagiralvpl glcflpafvl lgvvpaiagm astfltp
//
LOCUS       WP_235959450              63 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Actinomadura macrotermitis].
ACCESSION   WP_235959450
VERSION     WP_235959450.1
KEYWORDS    RefSeq.
SOURCE      Actinomadura macrotermitis
  ORGANISM  Actinomadura macrotermitis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Thermomonosporaceae; Actinomadura.
REFERENCE   1  (residues 1 to 63)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 63)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..63
                     /organism="Actinomadura macrotermitis"
                     /db_xref="taxon:2585200"
     Protein         1..63
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=6869
     Region          <8..63
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(27,30,53,63)
                     /site_type="active"
                     /db_xref="CDD:271175"
ORIGIN      
        1 mprnannvir ailrkvpglv aeewtprelr hsfvsilsaa gvsietiskl vghqttqvte
       61 dvy
//
LOCUS       WP_235959533             346 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Actinomadura macrotermitis].
ACCESSION   WP_235959533
VERSION     WP_235959533.1
KEYWORDS    RefSeq.
SOURCE      Actinomadura macrotermitis
  ORGANISM  Actinomadura macrotermitis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Thermomonosporaceae; Actinomadura.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12697.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Actinomadura macrotermitis"
                     /db_xref="taxon:2585200"
     Protein         1..346
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=36559
     Region          55..>184
                     /region_name="PldB"
                     /note="Lysophospholipase, alpha-beta hydrolase superfamily
                     [Lipid transport and metabolism]; COG2267"
                     /db_xref="CDD:441868"
     Region          73..342
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
ORIGIN      
        1 mtraqlksll iaactaattl tatttatpas astgpscety rlpvriadpg qatetmsgel
       61 crpanrrprt vqllvhggyy nhaywdfpvg ngyysyvraa tsagyatfnv dligsgassh
      121 pqsglvtsea gavalhdait alragtldgh gfgkviwvgh algsyyawse iprygdvdaa
      181 iltsalhgfn ldhaktgaan aypapddpkf agsgldrgyi ttrpdtrgam fyyppsadpa
      241 vvakdeelkd vypsaaivpp kipygirvpv llvggaqdwl tcqgvtvydc ddpesvraye
      301 sqfylpeakp kvvmvpatgh vmalartapl tdsimldwar gtvapk
//
LOCUS       WP_235959849             167 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4232 domain-containing protein [Nocardioides acrostichi].
ACCESSION   WP_235959849
VERSION     WP_235959849.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides acrostichi
  ORGANISM  Nocardioides acrostichi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14016.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Nocardioides acrostichi"
                     /db_xref="taxon:2784339"
     Protein         1..167
                     /product="DUF4232 domain-containing protein"
                     /calculated_mol_wt=17278
     Region          38..>111
                     /region_name="DUF4232"
                     /note="Protein of unknown function (DUF4232); pfam14016"
                     /db_xref="CDD:433646"
ORIGIN      
        1 mrrvvttllv lpavaactsh adpppaprpa taratascts selrvtlagq egagghlahl
       61 vrvtptgetp crlprspdav tvtttaggdv raeagssfpm vrldtlapgg apatlvvetd
      121 tscrhprrpi rsieisladg dvalhlrrgq rfdlgcgvrs sdfgvwq
//
LOCUS       WP_235959915             496 aa            linear   BCT 02-MAR-2025
DEFINITION  phospholipase D-like domain-containing protein [Actinomadura
            macrotermitis].
ACCESSION   WP_235959915
VERSION     WP_235959915.1
KEYWORDS    RefSeq.
SOURCE      Actinomadura macrotermitis
  ORGANISM  Actinomadura macrotermitis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Thermomonosporaceae; Actinomadura.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13091.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Actinomadura macrotermitis"
                     /db_xref="taxon:2585200"
     Protein         1..496
                     /product="phospholipase D-like domain-containing protein"
                     /calculated_mol_wt=53915
     Region          92..410
                     /region_name="Cls"
                     /note="Phosphatidylserine/phosphatidylglycerophosphate/car
                     diolipin synthase [Lipid transport and metabolism];
                     COG1502"
                     /db_xref="CDD:441111"
     Region          92..235
                     /region_name="PLDc_SF"
                     /note="Catalytic domain of phospholipase D superfamily
                     proteins; cl15239"
                     /db_xref="CDD:472788"
     Site            order(186,188,206,208,218)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197200"
     Site            186
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197200"
ORIGIN      
        1 mfialavasv dagtagaaia qtpgrvapas qtasaqqavg vrlassvrla akpkkkkkkk
       61 akkrkryyvk qgarfnlptg ntqqagaidl ylkklirhap kgseidvslf rlqtagmake
      121 lvraqkrkvk vrivldsdsl nsrpgvynyl krhlgadtrk pswvllcgkn rgciapsvqg
      181 qwsknhnkfy afshtydsrk vvvqtsgnat ggmynqynda ytatgklyda yrryfydlak
      241 rrpnpdywrt stygnravsh fpkasgdpva dildrvrctp gtkirlssgm ftrygvasrl
      301 fkldeagcev rivsgslges ttkaltkphg knngpdvhyf vgaqpkrahs kylliqgtyq
      361 gryrrlvftg shsytvdalr hndesmltld eratfdaymr nfdsvfaaak gkltgsplaq
      421 pkpvdddakd ddgeappttp ttpttpttpp paptptetat pttpdeglpp stgdpdaslp
      481 dvdvdgppda dgttpq
//
LOCUS       WP_235960178             156 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin-dependent oxidoreductase [Paenibacillus silvestris].
ACCESSION   WP_235960178
VERSION     WP_235960178.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus silvestris
  ORGANISM  Paenibacillus silvestris
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Kisker,C., Schindelin,H., Pacheco,A., Wehbi,W.A., Garrett,R.M.,
            Rajagopalan,K.V., Enemark,J.H. and Rees,D.C.
  TITLE     Molecular basis of sulfite oxidase deficiency from the structure of
            sulfite oxidase
  JOURNAL   Cell 91 (7), 973-983 (1997)
   PUBMED   9428520
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012401.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00174.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Paenibacillus silvestris"
                     /db_xref="taxon:2606219"
     Protein         1..156
                     /product="molybdopterin-dependent oxidoreductase"
                     /calculated_mol_wt=17466
     Region          <65..127
                     /region_name="SO_family_Moco"
                     /note="Sulfite oxidase (SO) family, molybdopterin binding
                     domain. This molybdopterin cofactor (Moco) binding domain
                     is found in a variety of oxidoreductases, main members of
                     this family are nitrate reductase (NR) and sulfite oxidase
                     (SO). SO catalyzes the...; cl00199"
                     /db_xref="CDD:469652"
ORIGIN      
        1 mqadlriqvs dphiahetlt vqelvdlaem klaledrvpn vsgdafdlka wyrswknsrg
       61 gqaesepthv kveavdefqa lmswsevdsa lllyaqdgep lkkgypirly vpdgssecln
      121 vksvvhiwfl hdallgeeat fgfknkvtld elkikk
//
LOCUS       WP_235960300              74 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Actinomadura macrotermitis].
ACCESSION   WP_235960300
VERSION     WP_235960300.1
KEYWORDS    RefSeq.
SOURCE      Actinomadura macrotermitis
  ORGANISM  Actinomadura macrotermitis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Thermomonosporaceae; Actinomadura.
REFERENCE   1  (residues 1 to 74)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 74)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025054.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13673.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Actinomadura macrotermitis"
                     /db_xref="taxon:2585200"
     Protein         1..74
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=8158
     Region          <2..66
                     /region_name="RimI"
                     /note="Ribosomal protein S18 acetylase RimI and related
                     acetyltransferases [Translation, ribosomal structure and
                     biogenesis]; COG0456"
                     /db_xref="CDD:440224"
ORIGIN      
        1 mvdkkysgrg ighalredll aprqeeratl lvrpdntata aytgwgwkqq gqlrpdaplf
       61 nvlmlklslq pgrs
//
LOCUS       WP_235960372             776 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Paenibacillus
            silvestris].
ACCESSION   WP_235960372
VERSION     WP_235960372.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus silvestris
  ORGANISM  Paenibacillus silvestris
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Paenibacillus silvestris"
                     /db_xref="taxon:2606219"
     Protein         1..776
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=88799
     Region          42..286
                     /region_name="dCache_1"
                     /note="Cache domain; pfam02743"
                     /db_xref="CDD:460673"
     Region          380..>597
                     /region_name="CdaR"
                     /note="Sugar diacid utilization regulator CdaR
                     [Transcription, Signal transduction mechanisms]; COG3835"
                     /db_xref="CDD:443046"
     Region          <631..773
                     /region_name="AraC"
                     /note="AraC-type DNA-binding domain and AraC-containing
                     proteins [Transcription]; COG2207"
                     /db_xref="CDD:441809"
ORIGIN      
        1 mkltynlkle hspifrsfli syvlilfipm vtgfisyyvs sdiiksssle asammlnqsk
       61 dvldrrmeev enitrqlsld qelnyvlnqq vdvdhydvya lwkswrntaa ysltntfled
      121 fyiylnnyha iftpsgvyvr pddffdlyhy edvdpvqwkq gllgsihrre tlpskpfign
      181 gkksnvityl qsipfdsfqh slgtavilid eneiakmler ipkqyggway isdkdghpia
      241 rvgiddaqiq amnipqlisq qpgniveget llisskstyn gwvyvvglpk sivlkqsvfi
      301 akvtwtitis tlllgivaal lfayrnsapi nrivsvfreq tgqgsykgkn afdflqgnis
      361 dllasqrsle eelkcqlpll edafvkrllk gefdslqevq tlmhslpsmk lkretghvai
      421 iringysglv sqeiihelna arllikkclf dssgvfqlnv tdidsdkigi lmtlkeeavh
      481 leaedmtdsl sglfeqlrey vkeeyriqmt vaiggsfqsl sdssrsfeea rgaldysvfm
      541 eeaetiwyrd vikesttyyy pidmelrmln avkigelqev hrifeqllah nfterqlsae
      601 mvqqlfgelk gtffkllqhs pftdqavsqg lkariehlql sasldrfrhd ilelleafcs
      661 rvlkkkedst geminkivdf ldqhysdsdl nlykisvdve lpekyisqlf kdhtgenlsd
      721 ylekirikka tdllfnsqht ideisqyvgy nsahafrraf krvsgvspsf yrktvn
//
LOCUS       WP_235960425             194 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6879 family protein [Actinomadura macrotermitis].
ACCESSION   WP_235960425
VERSION     WP_235960425.1
KEYWORDS    RefSeq.
SOURCE      Actinomadura macrotermitis
  ORGANISM  Actinomadura macrotermitis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Thermomonosporaceae; Actinomadura.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF045158.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21806.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Actinomadura macrotermitis"
                     /db_xref="taxon:2585200"
     Protein         1..194
                     /product="DUF6879 family protein"
                     /calculated_mol_wt=21258
ORIGIN      
        1 mattsagsdt srleptparl rtygraeskp tfaelladct tsavhlemhd qhitddprfl
       61 awkegrpqpq tsdgrafrda vsaavargvq vrrarivsep aseyikwehs ltaehniaag
      121 ewvrwlprpl asslllpgnp fwvfdgrmvr fsifdgdgrv vghqfsdapa laascasafe
      181 avwalavdhe nyka
//
LOCUS       WP_235960521             570 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase family 18 protein [Paenibacillus silvestris].
ACCESSION   WP_235960521
VERSION     WP_235960521.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus silvestris
  ORGANISM  Paenibacillus silvestris
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 570)
  AUTHORS   Perrakis,A., Tews,I., Dauter,Z., Oppenheim,A.B., Chet,I.,
            Wilson,K.S. and Vorgias,C.E.
  TITLE     Crystal structure of a bacterial chitinase at 2.3 A resolution
  JOURNAL   Structure 2 (12), 1169-1180 (1994)
   PUBMED   7704527
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00704.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Paenibacillus silvestris"
                     /db_xref="taxon:2606219"
     Protein         1..570
                     /product="glycosyl hydrolase family 18 protein"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=64677
     Region          174..226
                     /region_name="SH3_3"
                     /note="Bacterial SH3 domain; pfam08239"
                     /db_xref="CDD:462405"
     Region          272..561
                     /region_name="GH18_chitinase-like"
                     /note="The GH18 (glycosyl hydrolase, family 18) type II
                     chitinases hydrolyze chitin, an abundant polymer of
                     beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a
                     major component of the cell wall of fungi and the
                     exoskeleton of arthropods. Chitinases have...; cl10447"
                     /db_xref="CDD:471972"
     Site            order(282,354,356,358,420..421,464,548)
                     /site_type="active"
                     /db_xref="CDD:119349"
ORIGIN      
        1 mqhrrksskk illissliig mfaagaasfl wqqyapnhtk veteyheltk pvfyqgnyyk
       61 ssaigekegl klpleliqew idpsilyeks sdsviittkd kvlrlkttel salmnekpit
      121 lsfpvekkgs diyvpieplr qlypfeires dqsgavllfk kgevlkwakh mdseavplrt
      181 fasikapivs siaggeqvml lgeeeewyrv qqtsgpigyv rktdiqidhd etipvqedts
      241 syvpwkppag klnltwehvi sknpdttkig dmtglqvvsp twfslsdgeg rlknladaay
      301 vkwaqtqnyq vwalfsngfd pdvtnkalst ydsrmkiikq llgfaqtykl qgfnidfenv
      361 ylkdkenltq fvremtpfmh eqglavsidv tpkstnemws mfydrtalae vvdymmvmay
      421 deywatspks gsvsslpwte ssvkqilnad kvppsklvlg vpfytrqwte etkngkfttt
      481 sktltmeaaa aiikdkkltp tylpdtgqny veykdgekli riwledetsm karldlvkky
      541 nlagvaswrr gfeqspmwkv iqdglvpstp
//
LOCUS       WP_235960557             523 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Paenibacillus
            silvestris].
ACCESSION   WP_235960557
VERSION     WP_235960557.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus silvestris
  ORGANISM  Paenibacillus silvestris
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Paenibacillus silvestris"
                     /db_xref="taxon:2606219"
     Protein         1..523
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=60222
     Region          1..102
                     /region_name="REC_YesN-like"
                     /note="phosphoacceptor receiver (REC) domain of YesN and
                     related helix-turn-helix containing response regulators;
                     cd17536"
                     /db_xref="CDD:381091"
     Region          <314..514
                     /region_name="PRK09978"
                     /note="DNA-binding transcriptional regulator GadX;
                     Provisional"
                     /db_xref="CDD:137624"
     Region          426..509
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
ORIGIN      
        1 miselaldve viaearhgee aleliqmskp hivvtdmnmp vmngqqflet lytkyaeikv
       61 ivisgysqfe ylkaavtyqa ceyvlkpism qdlkqamika measlnylsi lqqkrltkdm
      121 wnlrrevflq nvtsrritnq sdiqgqsvel qitegigsyr lavcmfrgfh eisetkfhgn
      181 adllifsien ilseliadti qetapllfks ddklrlcvfi pepvnddrri rllfstfhda
      241 vyhmlkldvv vgvsgayanl eklpeafeta yeqlrnntlh dsglsinlpe qmsptdsqse
      301 mvsqfelkal qqafvtrnge esrkllkgya hkvshmnslt ireahrslgk imemaasemk
      361 elalsytqlf dtrsiiaivd wkqfsafidq falllvddld trkkasdstk liheitsyld
      421 kqyfedvsli dlatrfhldp sylskqfksv tgenfieylt rkrmemacel lrlserkitd
      481 iselvgyenq ryfsqvfkkf tgqtpseyre haeeraeqqn feh
//
LOCUS       WP_235960639             396 aa            linear   BCT 02-MAR-2025
DEFINITION  ROK family protein [Paenibacillus silvestris].
ACCESSION   WP_235960639
VERSION     WP_235960639.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus silvestris
  ORGANISM  Paenibacillus silvestris
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Paenibacillus silvestris"
                     /db_xref="taxon:2606219"
     Protein         1..396
                     /product="ROK family protein"
                     /calculated_mol_wt=42664
     Region          87..384
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mhsngpigny dlvkkinmeh aistilkyrp lsrakiaslt glnkmtvssc vdlfvqkgfv
       61 velgttgtsr grpptlvdln ekagicvgid veinqftvlv tdllgkklds miiplqskdp
      121 fffvdaisgi lrklekdhaq rqlgivgvgi vipgyynirt dvvdysanlq ewndfplrse
      181 lakrvpgltv hvnpasyaga mgevhfggak aadhlvyvts swglsvgvys kgelftgttg
      241 tagrlghsti hmngkkctcg srgcwemyas ikalyellet tpqemtiadi vagiergdsr
      301 itssvhelgh yqgiglanvi naynprvici ggllallgpt linsiwntlr emiparfllg
      361 leiycsdlge lgvahggvsm vlrqlsttii enslmg
//
LOCUS       WP_235960782             179 aa            linear   BCT 02-MAR-2025
DEFINITION  redoxin domain-containing protein [Paenibacillus silvestris].
ACCESSION   WP_235960782
VERSION     WP_235960782.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus silvestris
  ORGANISM  Paenibacillus silvestris
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 179)
  AUTHORS   Chae,H.Z., Robison,K., Poole,L.B., Church,G., Storz,G. and
            Rhee,S.G.
  TITLE     Cloning and sequencing of thiol-specific antioxidant from mammalian
            brain: alkyl hydroperoxide reductase and thiol-specific antioxidant
            define a large family of antioxidant enzymes
  JOURNAL   Proc Natl Acad Sci U S A 91 (15), 7017-7021 (1994)
   PUBMED   8041738
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012787.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00578.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Paenibacillus silvestris"
                     /db_xref="taxon:2606219"
     Protein         1..179
                     /product="redoxin domain-containing protein"
                     /GO_function="GO:0016209 - antioxidant activity [Evidence
                     IEA]"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=19476
     Region          6..>165
                     /region_name="PRK14018"
                     /note="bifunctional peptide-methionine (S)-S-oxide
                     reductase MsrA/peptide-methionine (R)-S-oxide reductase
                     MsrB"
                     /db_xref="CDD:184456"
ORIGIN      
        1 mmkikwllas vivlslfvla acgdkvatkt tqsalnsgqa apmfalkdlk gnkvelasla
       61 gekvyvkywa swcsiclggl eelnelagqd ngfkvitivs pnykgeqssk eftewfnglh
      121 deqksnltvl ldedgkwaqk fgvrgypssy yigsdgilak svpghnfnda iitnfkkis
//
LOCUS       WP_235961095             394 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent monooxygenase [Savagea serpentis].
ACCESSION   WP_235961095
VERSION     WP_235961095.1
KEYWORDS    RefSeq.
SOURCE      Savagea serpentis
  ORGANISM  Savagea serpentis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Savagea.
REFERENCE   1  (residues 1 to 394)
  AUTHORS   Schreuder,H.A., van der Laan,J.M., Swarte,M.B., Kalk,K.H., Hol,W.G.
            and Drenth,J.
  TITLE     Crystal structure of the reduced form of p-hydroxybenzoate
            hydroxylase refined at 2.3 A resolution
  JOURNAL   Proteins 14 (2), 178-190 (1992)
   PUBMED   1409567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01494.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Savagea serpentis"
                     /db_xref="taxon:2785297"
     Protein         1..394
                     /product="FAD-dependent monooxygenase"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /calculated_mol_wt=43990
     Region          11..392
                     /region_name="PRK08163"
                     /note="3-hydroxybenzoate 6-monooxygenase"
                     /db_xref="CDD:181262"
ORIGIN      
        1 mnekiivvgg giggltialg iakekksviv leqapefgev gagiqlaana tnvlqdlgvm
       61 dkikeigvfp nrlvlmdafs geelsalqlg evyekrygap yvvlhrsdlh kvlydacaes
      121 eyielvtnqq vknvvdeger vivtsangdv hegtsiigad giwsevrkqf vqdeavcsey
      181 vayrgaiptk eigndignld dvymwigpnl hlvqypvrkg elynqvvvfk sesyrpeieq
      241 tdqwgtpeem dtvftgtcdr vqhaisfiqr qrrwpmydrn pidtwtkgni allgdaahpm
      301 lqylaqgacq afedaayltq qmkekatvqd afeayaeeri prasfvqtsa rvwgeiihae
      361 apetillrdt imksrdsldf tyidqfhgyk veek
//
LOCUS       WP_235961148             281 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class IV [Savagea serpentis].
ACCESSION   WP_235961148
VERSION     WP_235961148.1
KEYWORDS    RefSeq.
SOURCE      Savagea serpentis
  ORGANISM  Savagea serpentis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Savagea.
REFERENCE   1  (residues 1 to 281)
  AUTHORS   Okada,K., Hirotsu,K., Sato,M., Hayashi,H. and Kagamiyama,H.
  TITLE     Three-dimensional structure of Escherichia coli branched-chain
            amino acid aminotransferase at 2.5 A resolution
  JOURNAL   J Biochem 121 (4), 637-641 (1997)
   PUBMED   9163511
REFERENCE   2  (residues 1 to 281)
  AUTHORS   Sugio,S., Petsko,G.A., Manning,J.M., Soda,K. and Ringe,D.
  TITLE     Crystal structure of a D-amino acid aminotransferase: how the
            protein controls stereoselectivity
  JOURNAL   Biochemistry 34 (30), 9661-9669 (1995)
   PUBMED   7626635
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013247.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01063.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Savagea serpentis"
                     /db_xref="taxon:2785297"
     Protein         1..281
                     /product="aminotransferase class IV"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=32198
     Region          2..272
                     /region_name="PLPDE_IV"
                     /note="PyridoxaL 5'-Phosphate Dependent Enzymes class IV
                     (PLPDE_IV). This D-amino acid superfamily, one of five
                     classes of PLPDE, consists of branched-chain amino acid
                     aminotransferases (BCAT), D-amino acid transferases
                     (DAAT), and 4-amino-4-deoxychorismate...; cl00224"
                     /db_xref="CDD:444764"
     Site            order(23..24,26..27,29,31,57,88,90,111,146,150,152,156,
                     170)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:238254"
     Site            order(31,50,144,177,204..205,240)
                     /site_type="active"
                     /note="substrate-cofactor binding pocket [active]"
                     /db_xref="CDD:238254"
     Site            order(50,144,177)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:238254"
     Site            144
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238254"
ORIGIN      
        1 mycyydgmim kesdvsispm shgflygvgf fetfrtynge vfqldahfer ltraltdlnm
       61 acsltpeqlr iacrqlneld enkdgyfrln vyageeglgl avpqydhvhv lllrkelhvs
      121 rgteklayri evprnseett yrhksfnfln nvkarqqlns lateegilin regyvvegvt
      181 snvfwskdhv iytpsvatgl legtarstvl kiasphyevc igefkeedlh sieemwitna
      241 vqelvpiksy enkrllgnkg piyqhlhaly qqvvykgene k
//
LOCUS       WP_235961255             324 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein
            [Spirabiliibacterium mucosae].
ACCESSION   WP_235961255
VERSION     WP_235961255.1
KEYWORDS    RefSeq.
SOURCE      Spirabiliibacterium mucosae
  ORGANISM  Spirabiliibacterium mucosae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Spirabiliibacterium.
REFERENCE   1  (residues 1 to 324)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Spirabiliibacterium mucosae"
                     /db_xref="taxon:28156"
     Protein         1..324
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=36353
     Region          <15..324
                     /region_name="PRK13484"
                     /note="IreA family TonB-dependent siderophore receptor"
                     /db_xref="CDD:139605"
ORIGIN      
        1 mtkyrpvfaa seekvtqkal fledeinltq dvlltlgvrm dnhqhygthw npraylvyhv
       61 npqwtvkggv akafrapsir elsqgyvtat qsgagviygn pdlkpetswn qevgveysnv
      121 dgyrlsatlf ntefknklis yqvfnaqgka kadpisganl fefgnvgran vrglelatqi
      181 plakdwrasv nytyqhskrk edklqgakfd yngyplantp khqlnakldw qitpqlaafg
      241 rynyvgkriw adqrtgyskg paryanayst vdvganyqls knvlfnfavl nvanergdki
      301 daenggnwsv vdgrrywanv nisf
//
LOCUS       WP_235961357             243 aa            linear   BCT 02-MAR-2025
DEFINITION  type I restriction-modification enzyme R subunit C-terminal
            domain-containing protein [Spirabiliibacterium mucosae].
ACCESSION   WP_235961357
VERSION     WP_235961357.1
KEYWORDS    RefSeq.
SOURCE      Spirabiliibacterium mucosae
  ORGANISM  Spirabiliibacterium mucosae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Spirabiliibacterium.
REFERENCE   1  (residues 1 to 243)
  AUTHORS   Makovets,S., Doronina,V.A. and Murray,N.E.
  TITLE     Regulation of endonuclease activity by proteolysis prevents
            breakage of unmodified bacterial chromosomes by type I restriction
            enzymes
  JOURNAL   Proc Natl Acad Sci U S A 96 (17), 9757-9762 (1999)
   PUBMED   10449767
REFERENCE   2  (residues 1 to 243)
  AUTHORS   Murray,N.E., Daniel,A.S., Cowan,G.M. and Sharp,P.M.
  TITLE     Conservation of motifs within the unusually variable polypeptide
            sequences of type I restriction and modification enzymes
  JOURNAL   Mol Microbiol 9 (1), 133-143 (1993)
   PUBMED   8412658
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020052.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08463.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Spirabiliibacterium mucosae"
                     /db_xref="taxon:28156"
     Protein         1..243
                     /product="type I restriction-modification enzyme R subunit
                     C-terminal domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=27366
     Region          <26..238
                     /region_name="HsdR"
                     /note="Type I site-specific restriction endonuclease, part
                     of a restriction-modification system [Defense mechanisms];
                     COG4096"
                     /db_xref="CDD:443272"
ORIGIN      
        1 mfadprfdgd pldvidekps gepntsfdds svfepvpdyn pttdeedydn nkgapvvgvg
       61 kvqvdiiher vqildptgrl itesikdytk ktllsnyasl ddflqnwtna akrqaiidil
      121 nesgvgldil kehvknpnld dfdllchiaf dkkpltrker aenikktdyl nhyeglardv
      181 lsklidfyad rgvevienpk vlqispfnkm gdseiisafg gmsgfttaly elrqniysnq
      241 yir
//
LOCUS       WP_235961421             184 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Falsiroseomonas selenitidurans].
ACCESSION   WP_235961421
VERSION     WP_235961421.1
KEYWORDS    RefSeq.
SOURCE      Falsiroseomonas selenitidurans
  ORGANISM  Falsiroseomonas selenitidurans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Falsiroseomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Falsiroseomonas selenitidurans"
                     /db_xref="taxon:2716335"
     Protein         1..184
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=20353
     Region          44..181
                     /region_name="NUDIX_ADPRase_Ndx2"
                     /note="NUDIX family Ndx2; cd24161"
                     /db_xref="CDD:467609"
ORIGIN      
        1 mpdtsrpdie tlgsreiyrn awmtvredai rrrdgstgiy gvvekvdfvt vvpvhadgsi
       61 qivqqfrypv gqrhwefvqg mwgppgtdpa eaarhellee tglaaaewih ggflnlaqgt
      121 mrqgydiyla rgltqgaamp eleeqdlvtr avtlaeferm lrageildat tvasfgllrl
      181 kgli
//
LOCUS       WP_235961459             310 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Falsiroseomonas
            selenitidurans].
ACCESSION   WP_235961459
VERSION     WP_235961459.1
KEYWORDS    RefSeq.
SOURCE      Falsiroseomonas selenitidurans
  ORGANISM  Falsiroseomonas selenitidurans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Falsiroseomonas.
REFERENCE   1  (residues 1 to 310)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Falsiroseomonas selenitidurans"
                     /db_xref="taxon:2716335"
     Protein         1..310
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=32267
     Region          28..299
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(125..126,128..129,132,136,138..144,233..238,
                     244..245,247..248)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176102"
ORIGIN      
        1 mpkasgsdgl sneapgerre grislaalrc fvavvegggl sraaehlgls qptvsvtlag
       61 leracgmlll hrrprllltd agrdmlvrar lvlgrmqele sslsafrglr rgsltigfst
      121 pffampmiaa flrehpgial rtrlgntagl leavagceie vavmtlvdpv egmactklad
      181 qrlvacmprc aaprsisler vaagplvlre pgsmtrlmle ralasrqlap qvrlevgsre
      241 aareaiaagi gigvvldgel gedtrlvavp ieapaisggv yavalpesle lpalaafiea
      301 gkgtgpggar
//
LOCUS       WP_235961546             469 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Falsiroseomonas selenitidurans].
ACCESSION   WP_235961546
VERSION     WP_235961546.1
KEYWORDS    RefSeq.
SOURCE      Falsiroseomonas selenitidurans
  ORGANISM  Falsiroseomonas selenitidurans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Falsiroseomonas.
REFERENCE   1  (residues 1 to 469)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 469)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 469)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 469)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Falsiroseomonas selenitidurans"
                     /db_xref="taxon:2716335"
     Protein         1..469
                     /product="ATP-binding protein"
                     /calculated_mol_wt=49589
     Region          93..>250
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
     Region          <189..458
                     /region_name="envZ"
                     /note="osmolarity sensor protein; Provisional; PRK09467"
                     /db_xref="CDD:236531"
ORIGIN      
        1 mrprwpagil arsllalsla lgvaallafl lyersraeal fafeaartad riadqmllsg
       61 lpgphrplpa eplgvtlrle paprlgaevp ggfamlaaqg iaarlpwata vrarlddtip
      121 apqpgrsfgr aeqmallkrr pppprrlvvt lrlpdgrwah aeamaftgtp qalweprfla
      181 afgllalatm lilagvvvva trplrqlaea aerlgadlna ppmpaagare arataqafnr
      241 mqdrlrdfva grtrllaais hdlrtpltra riraeamepp aeraalladl arleamlata
      301 lafargdvar eprrlldlav llgdvaeera eidepvtyag pergavvsga psalrralen
      361 lvsnavvhgg aarlglvpag aawrvtvedd gpglpaaele rvfepfhrgd aarslegggt
      421 glglaivrdv aaahggriwl enreagglra vlllpagdap plgppdrsr
//
LOCUS       WP_235961563             558 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ATP-binding protein [Corynebacterium].
ACCESSION   WP_235961563
VERSION     WP_235961563.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium
  ORGANISM  Corynebacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025124.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13749.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Corynebacterium"
                     /db_xref="taxon:1716"
     Protein         1..558
                     /product="ATP-binding protein"
                     /calculated_mol_wt=61056
     Region          2..114
                     /region_name="COG2865"
                     /note="Predicted transcriptional regulator, contains HTH
                     domain [Transcription]"
                     /db_xref="CDD:442112"
     Region          293..386
                     /region_name="HATPase_c_4"
                     /note="Putative ATP-dependent DNA helicase recG
                     C-terminal; pfam13749"
                     /db_xref="CDD:463975"
ORIGIN      
        1 mvecktaggg vpeqlgetlc afanmpqaga lilgvserrg fevtgvaepa kmeksvvnvn
       61 rsavtpapql effhhvldgk nvvvvevtpl lpsekpakfe gkpflrqadg dyvmnsndlk
      121 mlslsaltet qqhhfdfesl pgtdsalldt svlntymktv rasrsriaki ddvtqllqvt
      181 nvtdshgnvr lgglyalgyl pqsvepalga taavrlarge gagrnrnlte iegplpvmla
      241 eamdwirrna dtvsryteng hlvdqpefpp sairevlsna lvhrdlgpsv dvgkkveirl
      301 termliivsp gglrglsvsq leapsltkap vnkrlyeiar ylrmddgerv iegegggiqe
      361 iltairearl pkpkfidngv efkvlfprgs rftkeeddwl eglqrdglrl tpteedllvd
      421 lrnhggatls gilqryspys eqfckrmldr ltetgvlqet dgrytlpgtr sdtlrfeapr
      481 sditaafhtd glaslgknvp svyraftpga qvtlkelqaa tglsvaqvry alepllhhgh
      541 vvmlggqgrr gttyrlky
//
LOCUS       WP_235961617             179 aa            linear   BCT 02-MAR-2025
DEFINITION  transferrin-binding protein-like solute binding protein
            [Spirabiliibacterium mucosae].
ACCESSION   WP_235961617
VERSION     WP_235961617.1
KEYWORDS    RefSeq.
SOURCE      Spirabiliibacterium mucosae
  ORGANISM  Spirabiliibacterium mucosae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Spirabiliibacterium.
REFERENCE   1  (residues 1 to 179)
  AUTHORS   Adamiak,P., Calmettes,C., Moraes,T.F. and Schryvers,A.B.
  TITLE     Patterns of structural and sequence variation within isotype
            lineages of the Neisseria meningitidis transferrin receptor system
  JOURNAL   Microbiologyopen 4 (3), 491-504 (2015)
   PUBMED   25800619
REFERENCE   2  (residues 1 to 179)
  AUTHORS   Moraes,T.F., Yu,R.H., Strynadka,N.C. and Schryvers,A.B.
  TITLE     Insights into the bacterial transferrin receptor: the structure of
            transferrin-binding protein B from Actinobacillus pleuropneumoniae
  JOURNAL   Mol Cell 35 (4), 523-533 (2009)
   PUBMED   19716795
REFERENCE   3  (residues 1 to 179)
  AUTHORS   Vanini,M.M., Spisni,A., Sforca,M.L., Pertinhez,T.A. and
            Benedetti,C.E.
  TITLE     The solution structure of the outer membrane lipoprotein OmlA from
            Xanthomonas axonopodis pv. citri reveals a protein fold implicated
            in protein-protein interaction
  JOURNAL   Proteins 71 (4), 2051-2064 (2008)
   PUBMED   18186471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013466.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01298.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Spirabiliibacterium mucosae"
                     /db_xref="taxon:28156"
     Protein         1..179
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /calculated_mol_wt=19301
     Region          33..177
                     /region_name="TbpB_B_D"
                     /note="C-lobe and N-lobe beta barrels of Tf-binding
                     protein B; cl03152"
                     /db_xref="CDD:470752"
ORIGIN      
        1 mtrieygehi tpenvalfva nptteaqfaq qkgtatysgh tlgyvdgpdg ktptqgymgd
       61 vnlnvnfdtk midgkvtarq dgftkynwry tddddmptqk gidltkqdli lkptkievse
      121 ngtmsfgkga sdnvawmdgd kevasqnygg tfagpnadei vgqigggeer iafgasrdk
//
LOCUS       WP_235961989             257 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: AAA family ATPase [Corynebacterium].
ACCESSION   WP_235961989
VERSION     WP_235961989.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium
  ORGANISM  Corynebacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024573.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13175.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Corynebacterium"
                     /db_xref="taxon:1716"
     Protein         1..257
                     /product="AAA family ATPase"
                     /calculated_mol_wt=28365
     Region          1..>91
                     /region_name="YbjD"
                     /note="Predicted ATP-dependent endonuclease of the OLD
                     family, contains P-loop ATPase and TOPRIM domains
                     [Replication, recombination and repair]; COG3593"
                     /db_xref="CDD:442812"
ORIGIN      
        1 mkfttlrisn fqcfgpapti lnltdmtyvl gpngagktav lealsrmfsp vaaqrtvris
       61 dfhvpvdrsl telqeeepvl wievdiefpe idsegyhasi ppnfhhmmie svagvpkvrv
      121 rltaklaldg vveerieyvr qidesgeptv cadmsrydrg yievhylpag rdpsehiayt
      181 atsligrtlr aadwsqertt lsdlseqltn altsnsavss gtetscvgvl gtdthivqrl
      241 qshdgechfe tqgdtkr
//
LOCUS       WP_235962241             295 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphate acyltransferase [Jeotgalicoccus meleagridis].
ACCESSION   WP_235962241
VERSION     WP_235962241.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalicoccus meleagridis
  ORGANISM  Jeotgalicoccus meleagridis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Jeotgalicoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013665.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01515.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Jeotgalicoccus meleagridis"
                     /db_xref="taxon:2759181"
     Protein         1..295
                     /product="phosphate acyltransferase"
                     /GO_function="GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=32038
     Region          2..290
                     /region_name="PTA_PTB"
                     /note="Phosphate acetyl/butaryl transferase; cl17212"
                     /db_xref="CDD:450173"
ORIGIN      
        1 mtfdsmlnln ntasksialv ransldllei vketstdstv swhlfdnkdg leeafkklnf
       61 ewydhrisih htesdeeasn aaaaliqtgq anilmkgiis tntilksvln kslklldqpl
      121 lshialfklp syhkpliisd aamninpdeq mkisiidnal rvaekigvte pkvalisave
      181 kvnpkiestv inqsiadnhh fknavvegpm sydlalskaa aevksyeskv agdvdilimp
      241 nidagnvlyk altisagahv agliiglkap fvltsradsk deklnslkla fqllt
//
LOCUS       WP_235962285             540 aa            linear   BCT 02-MAR-2025
DEFINITION  adhesive domain-containing protein, partial [Jeotgalicoccus
            meleagridis].
ACCESSION   WP_235962285
VERSION     WP_235962285.1
KEYWORDS    RefSeq.
SOURCE      Jeotgalicoccus meleagridis
  ORGANISM  Jeotgalicoccus meleagridis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Jeotgalicoccus.
REFERENCE   1  (residues 1 to 540)
  AUTHORS   Creti,R., Fabretti,F., Koch,S., Huebner,J., Garsin,D.A.,
            Baldassarri,L., Montanaro,L. and Arciola,C.R.
  TITLE     Surface protein EF3314 contributes to virulence properties of
            Enterococcus faecalis
  JOURNAL   Int J Artif Organs 32 (9), 611-620 (2009)
   PUBMED   19856273
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042848.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20609.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Jeotgalicoccus meleagridis"
                     /db_xref="taxon:2759181"
     Protein         1..>540
                     /product="adhesive domain-containing protein"
     Region          66..372
                     /region_name="pAdhesive_17"
                     /note="Putative adhesive domain (group 17); pfam20609"
                     /db_xref="CDD:466758"
     Region          395..463
                     /region_name="Big_6"
                     /note="Bacterial Ig domain; pfam17936"
                     /db_xref="CDD:465576"
ORIGIN      
        1 msnndkkkma knydykramk rksdhsllkk vamtvvaanl vvaplgnyid yfsgqinien
       61 vayaqsladv tllenvnies yinepevgqp ynlnlslsgs gladvelint drvvafsipe
      121 lagqmtange ayytvdltav nmddlpilnn tvsgitgtlt ttvdavlqlv velnnsiipn
      181 elitirgied lqgslnalnn ldqalaevlq hsgtapviin adgtitvdmt dglgnhldsa
      241 vndvviqtln dliaslngvs lailpeaeri pgvgliirgl nqtingvlsg vtelagtvtn
      301 tvnnldvpgl tselaraqll gntsvqldll vnnpvdlenp elpvpvygsv vntafvdvnl
      361 igngtnqsqi qfpaqqqape iinamisgnt ydnyvvsgea lepgdtvevr netgnvvgts
      421 tidelgnftv dvdstvvteg etlyvvgvne sgmtsdpyei ivpedddtda dadadadada
      481 dadadadada dadadadada dadadadada dadadadada dadadadada dadadadada
//
LOCUS       WP_235962329             888 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 70 protein [Heyndrickxia coagulans].
ACCESSION   WP_235962329
VERSION     WP_235962329.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia coagulans (Bacillus coagulans)
  ORGANISM  Heyndrickxia coagulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
REFERENCE   1  (residues 1 to 888)
  AUTHORS   Monchois,V., Willemot,R.M., Remaud-Simeon,M., Croux,C. and
            Monsan,P.
  TITLE     Cloning and sequencing of a gene coding for a novel dextransucrase
            from Leuconostoc mesenteroides NRRL B-1299 synthesizing only alpha
            (1-6) and alpha (1-3) linkages
  JOURNAL   Gene 182 (1-2), 23-32 (1996)
   PUBMED   8982063
REFERENCE   2  (residues 1 to 888)
  AUTHORS   Henrissat,B.
  TITLE     A classification of glycosyl hydrolases based on amino acid
            sequence similarities
  JOURNAL   Biochem J 280 (Pt 2) (Pt 2), 309-316 (1991)
   PUBMED   1747104
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014388.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02324.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Heyndrickxia coagulans"
                     /db_xref="taxon:1398"
     Protein         1..888
                     /product="glycoside hydrolase family 70 protein"
                     /GO_function="GO:0046527 - glucosyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009250 - glucan biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=99729
     Region          41..625
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
     Site            order(146,408,410,513..514)
                     /site_type="active"
                     /db_xref="CDD:200451"
     Region          355..>795
                     /region_name="Glyco_hydro_70"
                     /note="Glycosyl hydrolase family 70; pfam02324"
                     /db_xref="CDD:426720"
ORIGIN      
        1 mekkffsrls ilifsvllva gsisyfpksa kaytsgtsld nrvifqsfsl yqpyesnmyk
       61 ilsakgnelk dwgitdiwlp payrsfnaar ymegyaiadr ydlgefnqgp nntrptkygt
      121 sdelksmvsv lhanglkvqe dlvpnqvlgl skreavyvtr vdqngnlfkn pyttglttqi
      181 ranlylaytk gggegqakyg yikewnkkyf ngtsvqgqgm drvmkdsegi pyryfgpnnp
      241 knhlpswlde aaaankintv dtylpvdgwy aakdastsdn ywkpmlmhdp gylkymkshg
      301 yssvddilng dngqiasltd ayiasqpgyg fgseersfkn dhsgsdnqdq flfvkkngtt
      361 fhnlnntisg qnqflvgmdi dngnptvqke qihwmnwlld tyhfdgfrid aashydkqvl
      421 ldegdvmkqh fgshlndhls yietyesagt nfenangnpq lmmdyalfys lqnalgknsp
      481 snslstiatn avvnragagt anatpnwsfv nnhdqeknrv nkimmdlygi kpgihygtsa
      541 pksfqdlydk kteakaldiy ekdmertvkt yapsnvpsqy ayiltnkdtv ptvfygdlyk
      601 tnasymseht pyydtivkll kvrknyaygn qqvtnyksnt sgtagkdlis svrygkdrnt
      661 gvatvignnp ktdttikvdm gtrhanqlfe datgfhnekl stdskgiltv hvkgtqnprv
      721 kgylgvwips kkaatpkqgp alqygkyvtv tnkhyavyqd fnwkkknvta vnktylakvq
      781 yhhsngstyl slydgkgkwa gyinakavkt gsgkqgaaiq ygkhvkvtsk nyavyqnfnw
      841 qkkniravnk tylakyifyh inglsylsly dnkgkwigyi nakavksk
//
LOCUS       WP_235962383              47 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxylesterase family protein [Heyndrickxia coagulans].
ACCESSION   WP_235962383
VERSION     WP_235962383.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia coagulans (Bacillus coagulans)
  ORGANISM  Heyndrickxia coagulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012363.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00135.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..47
                     /organism="Heyndrickxia coagulans"
                     /db_xref="taxon:1398"
     Protein         1..47
                     /product="carboxylesterase family protein"
                     /calculated_mol_wt=5134
     Region          3..>47
                     /region_name="PnbA"
                     /note="Carboxylesterase type B [Lipid transport and
                     metabolism]; COG2272"
                     /db_xref="CDD:441873"
ORIGIN      
        1 mktaivetvf gkaqgyeekg vqiwkgipya kppigplrfr ppelpep
//
LOCUS       WP_235962392              41 aa            linear   BCT 02-MAR-2025
DEFINITION  YetF domain-containing protein [Heyndrickxia coagulans].
ACCESSION   WP_235962392
VERSION     WP_235962392.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia coagulans (Bacillus coagulans)
  ORGANISM  Heyndrickxia coagulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016154.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04239.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..41
                     /organism="Heyndrickxia coagulans"
                     /db_xref="taxon:1398"
     Protein         1..41
                     /product="YetF domain-containing protein"
                     /calculated_mol_wt=4592
     Region          <1..38
                     /region_name="DUF421"
                     /note="Protein of unknown function (DUF421); cl00990"
                     /db_xref="CDD:470022"
ORIGIN      
        1 mnqlsellrk qgvfsldeid qaylekdgtv tvkkrkdnps k
//
LOCUS       WP_235962433             403 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Jannaschia marina].
ACCESSION   WP_235962433
VERSION     WP_235962433.1
KEYWORDS    RefSeq.
SOURCE      Jannaschia marina
  ORGANISM  Jannaschia marina
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Jannaschia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Jannaschia marina"
                     /db_xref="taxon:2741674"
     Protein         1..403
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=42737
     Region          32..348
                     /region_name="AraJ"
                     /note="Predicted arabinose efflux permease AraJ, MFS
                     family [Carbohydrate transport and metabolism]; COG2814"
                     /db_xref="CDD:442063"
ORIGIN      
        1 mrrnvalypw ykffgglifw qavwflylqa elsaaeaill yaiydvattv levpsgwlsd
       61 nwgrrrtlmv aavaglatas mqavggpfww falaqvllav qaafvsgtdt sllyesltae
      121 greaeverqe ligwragfaa lalsallgga larfdltwsy wasavafgal lavtlmfrep
      181 akaatdptgp prltllreav hqpvllwlss lavvmyafsh vpfvfgqpfi eralagtgla
      241 detplvsgai taammtvsla vslvaprlra avgltamllg afalqlalpg alaiatgpla
      301 vllllsrmvp dalarpflia riqplladgt ratylslqsl lgrlffaatl wvaassttdv
      361 gqmpeadvrl vmgiyalggl lillvlaals rclpidgpps sag
//
LOCUS       WP_235962498             256 aa            linear   BCT 02-MAR-2025
DEFINITION  EcsC family protein [Jannaschia marina].
ACCESSION   WP_235962498
VERSION     WP_235962498.1
KEYWORDS    RefSeq.
SOURCE      Jannaschia marina
  ORGANISM  Jannaschia marina
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Jannaschia.
REFERENCE   1  (residues 1 to 256)
  AUTHORS   Leskela,S., Kontinen,V.P. and Sarvas,M.
  TITLE     Molecular analysis of an operon in Bacillus subtilis encoding a
            novel ABC transporter with a role in exoprotein production,
            sporulation and competence
  JOURNAL   Microbiology (Reading) 142 (Pt 1), 71-77 (1996)
   PUBMED   8581172
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024197.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12787.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Jannaschia marina"
                     /db_xref="taxon:2741674"
     Protein         1..256
                     /product="EcsC family protein"
                     /calculated_mol_wt=26722
     Region          <106..236
                     /region_name="EcsC"
                     /note="EcsC protein family; pfam12787"
                     /db_xref="CDD:463705"
ORIGIN      
        1 mtetmpppar aqifppldre aeldrlarkm reasglgmqv lnlvgtqaeg llemlpeqvr
       61 avlerataaa leqsfdaaka trggriadap dwlsraisvg tgaaggfggl psalaelpvt
      121 ttvilraiqt iadehgldpa lpevraaclr vfaaagpldd ddgtdlsflt lrltvtgsav
      181 hgliakvapr lavplgqkla aqtvpvigaa agaatnyvft gyyqevarvq fglmrlgaqt
      241 gedmetlsae lkrrlt
//
LOCUS       WP_235962624             103 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6476 family protein [Jannaschia marina].
ACCESSION   WP_235962624
VERSION     WP_235962624.1
KEYWORDS    RefSeq.
SOURCE      Jannaschia marina
  ORGANISM  Jannaschia marina
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Jannaschia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039467.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20082.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Jannaschia marina"
                     /db_xref="taxon:2741674"
     Protein         1..103
                     /product="DUF6476 family protein"
                     /calculated_mol_wt=11002
     Region          16..103
                     /region_name="DUF6476"
                     /note="Family of unknown function (DUF6476); pfam20082"
                     /db_xref="CDD:466284"
ORIGIN      
        1 mvkvtrmsdm denpglppdl rflktlvtil tgvmivglit vvgllvtrlp gaavtlpeal
       61 eipedaeiva vtqapsywla tttddrllvf apdggfrrei ald
//
LOCUS       WP_235962685             119 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar basal body protein [Jannaschia marina].
ACCESSION   WP_235962685
VERSION     WP_235962685.1
KEYWORDS    RefSeq.
SOURCE      Jannaschia marina
  ORGANISM  Jannaschia marina
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Jannaschia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012674.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00460.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Jannaschia marina"
                     /db_xref="taxon:2741674"
     Protein         1..119
                     /product="flagellar basal body protein"
                     /GO_process="GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /calculated_mol_wt=12530
     Region          21..119
                     /region_name="flgB"
                     /note="FlgB family protein; PRK12627"
                     /db_xref="CDD:237152"
ORIGIN      
        1 mpallrlaga aaahaareas vvagnvanad tpgykaralt pftldadfal rrsdprhlag
       61 ltpgsqvqvq rdlasdpngn tvdledqilr gieaarahnr avtvyrnnie llraalgrr
//
LOCUS       WP_235962784             147 aa            linear   BCT 02-MAR-2025
DEFINITION  integrase core domain-containing protein, partial [Ruegeria
            haliotis].
ACCESSION   WP_235962784
VERSION     WP_235962784.1
KEYWORDS    RefSeq.
SOURCE      Ruegeria haliotis
  ORGANISM  Ruegeria haliotis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Ruegeria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025063.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13683.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Ruegeria haliotis"
                     /db_xref="taxon:2747601"
     Protein         <1..147
                     /product="integrase core domain-containing protein"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <3..122
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 yhihtiltdn giqfaeqprn rntiysrpmr fdmicdangi ehrltkpnhp wslrdqdliq
       61 wikfpengqv ermnrtikda tvkryhyddn dqlrvhltdf maaynfarrl ktlggltpye
      121 yickiwtsep drfilnpihq mpglnsq
//
LOCUS       WP_235962910             312 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Ruegeria
            haliotis].
ACCESSION   WP_235962910
VERSION     WP_235962910.1
KEYWORDS    RefSeq.
SOURCE      Ruegeria haliotis
  ORGANISM  Ruegeria haliotis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Ruegeria.
REFERENCE   1  (residues 1 to 312)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Ruegeria haliotis"
                     /db_xref="taxon:2747601"
     Protein         1..312
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=35442
     Region          1..298
                     /region_name="PRK11139"
                     /note="DNA-binding transcriptional activator GcvA;
                     Provisional"
                     /db_xref="CDD:182990"
ORIGIN      
        1 mlkrlpplts lqafeavsrh msiklaaeel lltptaishr lktletqldi qlfhrltrsl
       61 klttegemlr pfvtdafsnl kqgiaqlstd evegdlvvtt trsfawswls prlpnfsrly
      121 pdlevkvias dtvldfarfs vdvsirytds pdpnehaawv lddyvtpics rrmekkirkp
      181 edllsrdlve yewlgfeegd pnwcawfesv gidatgirpi anfsdeimci eaamddraaa
      241 lvsviaasre iergrisapi pkvlrdrsyy lvcpmeraqs akvrafqdwl lkeadvfrds
      301 pyglrfipqg de
//
LOCUS       WP_235962955             270 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6473 family protein [Ruegeria haliotis].
ACCESSION   WP_235962955
VERSION     WP_235962955.1
KEYWORDS    RefSeq.
SOURCE      Ruegeria haliotis
  ORGANISM  Ruegeria haliotis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Ruegeria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040434.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20078.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Ruegeria haliotis"
                     /db_xref="taxon:2747601"
     Protein         1..270
                     /product="DUF6473 family protein"
                     /calculated_mol_wt=29950
     Region          1..269
                     /region_name="DUF6473"
                     /note="Domain of unknown function (DUF6473); pfam20078"
                     /db_xref="CDD:466282"
ORIGIN      
        1 msyhqtasgr pedavcqyag sklwfrgpec aldrpyvacv ggdetfgrfv erpfpailea
       61 klnktcanfg slfcgveais rgqglldlvn gsqqcvlqap dvpgqsnlfy rvhprrndrf
      121 leptkelldl ypdvdftevh fvrhllgrlr vkddarfdii aqelraawir slrsllgrid
      181 ppvvllwlrv rrhqsleggd pvpidaamid qlrplcasvv emsvcasgvs deledvlfgt
      241 lqqpmaeyvi gpsahkviad allppirdln
//
LOCUS       WP_235962966             126 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Ruegeria
            haliotis].
ACCESSION   WP_235962966
VERSION     WP_235962966.1
KEYWORDS    RefSeq.
SOURCE      Ruegeria haliotis
  ORGANISM  Ruegeria haliotis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Ruegeria.
REFERENCE   1  (residues 1 to 126)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Ruegeria haliotis"
                     /db_xref="taxon:2747601"
     Protein         <1..126
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <1..120
                     /region_name="PRK07525"
                     /note="sulfoacetaldehyde acetyltransferase; Validated"
                     /db_xref="CDD:236042"
ORIGIN      
        1 neltaigree wpavtqivfr nyqwgaekrn stlwyddnfv gteldtkvsy agiatacglk
       61 gvvartqdel taalnqaivd qkngittlie alinqelgep frrdamkkpv avagvsandm
      121 ahmkqa
//
LOCUS       WP_235963026             190 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Ruegeria
            haliotis].
ACCESSION   WP_235963026
VERSION     WP_235963026.1
KEYWORDS    RefSeq.
SOURCE      Ruegeria haliotis
  ORGANISM  Ruegeria haliotis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Ruegeria.
REFERENCE   1  (residues 1 to 190)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Ruegeria haliotis"
                     /db_xref="taxon:2747601"
     Protein         1..190
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=20134
     Region          2..169
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(13..14,16..17,20,24,26..32,114..119,125..126,
                     128..129)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176102"
ORIGIN      
        1 mgipddhgra rlaaiiatfa rqhpkveldv tcalstsfpe aldkgsldla vyevespssh
       61 eevvyedptc wvssahrhfr adeslpvalf dhacwwrdaa vislqargqp yrvvyssqsv
      121 sgviaaveag iavgllgrss lhgglsvvnd alglgntpas klvmasskpk eqgpqdamke
      181 airaafmakp
//
LOCUS       WP_235963070             387 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Phocicoccus pinnipedialis].
ACCESSION   WP_235963070
VERSION     WP_235963070.1
KEYWORDS    RefSeq.
SOURCE      Phocicoccus pinnipedialis
  ORGANISM  Phocicoccus pinnipedialis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Salinicoccaceae; Phocicoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Phocicoccus pinnipedialis"
                     /db_xref="taxon:110845"
     Protein         1..387
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=42474
     Region          1..375
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(4..5,8..9,12,45,94..95,97..99,102,131,134..135,138,
                     213,216..217,220..222,225,253,257,306..307,311,315,330,
                     333..334,337..338,341)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mvflgvaiai tapymviymt kyhgmtvtgf glfmgtgavg sfivntivgr fsdrlpfdrk
       61 ylilaalfme vityslflil nqtwilvlgf ilfyslgapa mpqlyasare svndannkss
      121 nfktfantll rsmfsfgflf gpligsilli kydfmglfig aifmfltvfv stlfisnpkr
      181 qseqdiipaq mlgeteapkl fktpallipf iaftflqvgq wsyllnmply vtnflgegne
      241 kvgllssica glevpfmigi glvaskyqtk hllmvagmig amffiivgmf nsfmvilvgq
      301 vflamflavi lglgisyfqd vlpqfpgyas tlyangmivg qllgnlmggl isdylsvqys
      361 fiasgimlii avvmfgfekn evkegiv
//
LOCUS       WP_235963125             534 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Phocicoccus pinnipedialis].
ACCESSION   WP_235963125
VERSION     WP_235963125.1
KEYWORDS    RefSeq.
SOURCE      Phocicoccus pinnipedialis
  ORGANISM  Phocicoccus pinnipedialis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Salinicoccaceae; Phocicoccus.
REFERENCE   1  (residues 1 to 534)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Phocicoccus pinnipedialis"
                     /db_xref="taxon:110845"
     Protein         1..534
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=60667
     Region          1..531
                     /region_name="RocB"
                     /note="Arginine utilization protein RocB [Amino acid
                     transport and metabolism]; COG4187"
                     /db_xref="CDD:443341"
ORIGIN      
        1 melwqtsvdr enllkqfvlh dtithskgek sfvdlvknnl eqlpyfrqqd riqfahtddd
       61 rraliahyeg ktskdtivli shfdtvgvdd yaeykeyafd tdkitehfkk dnsyldndai
      121 kdlnsneylf grgvmdmkpg lmlhmsliek aiieewdinl vlvtvpdeev gskgmlaaid
      181 tlkelkerkn lnirlhlnse ptfqqegsdt nhyvysgtig kimpgvfvyg lethvgnaln
      241 gissnyimsy inqsleynpl fienfkdeit pplvslymrd ikdhydvqtp fktvslynaf
      301 ifnrnaeevf etfnsvveka vescttvlne qfdtgfyagg vsvpvityse lyvkavnelg
      361 retvetiinq aeqkvteshm ksvqivddlm tvmrsigpav itfytppyyp aanssddldv
      421 klavsevirs aselgrisee vryfngicdl syvqytsnnl sdavyeentp sfgrsysipf
      481 dsireisapi inigpigkda hkvservlkk safselpyil esviqncyik nrdv
//
LOCUS       WP_235963114             155 aa            linear   BCT 02-MAR-2025
DEFINITION  QueT transporter family protein [Phocicoccus pinnipedialis].
ACCESSION   WP_235963114
VERSION     WP_235963114.1
KEYWORDS    RefSeq.
SOURCE      Phocicoccus pinnipedialis
  ORGANISM  Phocicoccus pinnipedialis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Salinicoccaceae; Phocicoccus.
REFERENCE   1  (residues 1 to 155)
  AUTHORS   Meyer,M.M., Roth,A., Chervin,S.M., Garcia,G.A. and Breaker,R.R.
  TITLE     Confirmation of a second natural preQ1 aptamer class in
            Streptococcaceae bacteria
  JOURNAL   RNA 14 (4), 685-695 (2008)
   PUBMED   18305186
REFERENCE   2  (residues 1 to 155)
  AUTHORS   Roth,A., Winkler,W.C., Regulski,E.E., Lee,B.W., Lim,J., Jona,I.,
            Barrick,J.E., Ritwik,A., Kim,J.N., Welz,R., Iwata-Reuyl,D. and
            Breaker,R.R.
  TITLE     A riboswitch selective for the queuosine precursor preQ1 contains
            an unusually small aptamer domain
  JOURNAL   Nat Struct Mol Biol 14 (4), 308-317 (2007)
   PUBMED   17384645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017941.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06177.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Phocicoccus pinnipedialis"
                     /db_xref="taxon:110845"
     Protein         1..155
                     /product="QueT transporter family protein"
                     /calculated_mol_wt=17180
     Region          1..155
                     /region_name="QueT"
                     /note="ECF-type transporter of queuosine precursor,
                     membrane (S) component [Nucleotide transport and
                     metabolism, Translation, ribosomal structure and
                     biogenesis]; COG4708"
                     /db_xref="CDD:443743"
ORIGIN      
        1 mkmstrdlti nailaalyvv fttinpigtg aiqlrvseml amvpffnrqy ipgilvgmfi
       61 anmfsslgpi dvvvglsisi iaytisyfvk nvwfnafqys vlcaiivplm lwqvlgvpyw
      121 ptflaifisn livtfigtfl lskfgdrmml tssie
//
LOCUS       WP_235963355             609 aa            linear   BCT 02-MAR-2025
DEFINITION  MutS-related protein [Tautonia rosea].
ACCESSION   WP_235963355
VERSION     WP_235963355.1
KEYWORDS    RefSeq.
SOURCE      Tautonia rosea
  ORGANISM  Tautonia rosea
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Isosphaerales; Isosphaeraceae; Tautonia.
REFERENCE   1  (residues 1 to 609)
  AUTHORS   Obmolova,G., Ban,C., Hsieh,P. and Yang,W.
  TITLE     Crystal structures of mismatch repair protein MutS and its complex
            with a substrate DNA
  JOURNAL   Nature 407 (6805), 703-710 (2000)
   PUBMED   11048710
REFERENCE   2  (residues 1 to 609)
  AUTHORS   Tachiki,H., Kato,R., Masui,R., Hasegawa,K., Itakura,H., Fukuyama,K.
            and Kuramitsu,S.
  TITLE     Domain organization and functional analysis of Thermus thermophilus
            MutS protein
  JOURNAL   Nucleic Acids Res 26 (18), 4153-4159 (1998)
   PUBMED   9722634
  REMARK    Erratum:[Nucleic Acids Res 1998 Oct 15;26(20):following 4789]
REFERENCE   3  (residues 1 to 609)
  AUTHORS   Jiricny,J.
  TITLE     Colon cancer and DNA repair: have mismatches met their match?
  JOURNAL   Trends Genet 10 (5), 164-168 (1994)
   PUBMED   8036718
REFERENCE   4  (residues 1 to 609)
  AUTHORS   New,L., Liu,K. and Crouse,G.F.
  TITLE     The yeast gene MSH3 defines a new class of eukaryotic MutS
            homologues
  JOURNAL   Mol Gen Genet 239 (1-2), 97-108 (1993)
   PUBMED   8510668
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012700.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00488.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Tautonia rosea"
                     /db_xref="taxon:2728037"
     Protein         1..609
                     /product="MutS-related protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0030983 - mismatched DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006298 - mismatch repair [Evidence IEA]"
                     /calculated_mol_wt=66564
     Region          139..>190
                     /region_name="MutS_III"
                     /note="MutS domain III; pfam05192"
                     /db_xref="CDD:461579"
     Region          405..607
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            439..446
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213250"
     Site            order(442..443,445..447,482,519..520,553)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:213250"
     Site            479..482
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213250"
     Site            487..500
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213250"
     Site            515..520
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213250"
     Site            523..526
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213250"
     Site            549..555
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213250"
ORIGIN      
        1 madcpsdssp seksdphaey lrrrdarrdd anrlserhgr iadgrllvfa lglalavgtl
       61 glgwgsawwl lvpvivfagl viaydavgrl hrraerrvaf yeaglarles rwagrgdpgn
      121 rflktdhpfd adldlfgpgs vferlctart gsgkttlasw lhhpasvdei rarheavael
      181 rdrldlredl allgddveqg lhpttliawg dappvlqsrv vrigasllav lnmvaliawt
      241 vglgpvplma tvaatlifsr sirndlvqil gavderaeel rlleallari ehepftsarl
      301 lairdtqsnd hqppsqqiar larlvmlldf rrnqlfapla flllwgvhlg laierwrnqs
      361 grsierwlda vgqfealcal asyaferphd pfpeivsese gpvveakalg hplipddqnv
      421 rndvtlggae gprvllvsgs nmsgkstllr svgvnvvlal agapvradql rlspmsvgst
      481 lrvqdslqag rsrfyaeitr lrtlvdlast pppllfllde ilhgtnshdr rsgaqgvvkg
      541 lldrgaiglv tthdlalaei vaglghraen vhfedhledg qmrfdyimrp gvvqksnale
      601 lmravglev
//
LOCUS       WP_235963454             107 aa            linear   BCT 02-MAR-2025
DEFINITION  glutathione S-transferase N-terminal domain-containing protein
            [Marinomonas colpomeniae].
ACCESSION   WP_235963454
VERSION     WP_235963454.1
KEYWORDS    RefSeq.
SOURCE      Marinomonas colpomeniae
  ORGANISM  Marinomonas colpomeniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Marinomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024809.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13417.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Marinomonas colpomeniae"
                     /db_xref="taxon:2774408"
     Protein         1..107
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /GO_process="GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=12179
     Region          29..106
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 msidlvtrgs klkrtqekqa qvnkelenls lyqhfacpfc tktrramhkl nlpiqmrsvt
       61 qgsafraell egggkvtvpc lrieengkvn wmyessdiis ylekrfs
//
LOCUS       WP_235963590             291 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Marinomonas
            colpomeniae].
ACCESSION   WP_235963590
VERSION     WP_235963590.1
KEYWORDS    RefSeq.
SOURCE      Marinomonas colpomeniae
  ORGANISM  Marinomonas colpomeniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Marinomonas.
REFERENCE   1  (residues 1 to 291)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Marinomonas colpomeniae"
                     /db_xref="taxon:2774408"
     Protein         1..291
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=33840
     Region          2..283
                     /region_name="PRK11139"
                     /note="DNA-binding transcriptional activator GcvA;
                     Provisional"
                     /db_xref="CDD:182990"
ORIGIN      
        1 mafeaagrtl nftqaaqelh vsqaaiskqi kylegyfgfa lferqgrkvs lssrglqfhn
       61 kinasfnfma daveeylede dnssvtvsan samshywlgn ainefyrthk ktpnirvits
      121 ditrdlfvde vdiaiayepg qrigwktsfl fkeemfpias pdylkthpfl gnnpenlfkh
      181 elldferiep nwmnwkawfs eldintdklm inhrfnnyiv lidsakrglg itlgtrylid
      241 sklkekqlir lsdfsvlsgr sywlalnesk pmndntrrfy dwlnhyqamr e
//
LOCUS       WP_235963635             517 aa            linear   BCT 02-MAR-2025
DEFINITION  oligosaccharide flippase family protein [Tautonia rosea].
ACCESSION   WP_235963635
VERSION     WP_235963635.1
KEYWORDS    RefSeq.
SOURCE      Tautonia rosea
  ORGANISM  Tautonia rosea
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Isosphaerales; Isosphaeraceae; Tautonia.
REFERENCE   1  (residues 1 to 517)
  AUTHORS   Yao,Z. and Valvano,M.A.
  TITLE     Genetic analysis of the O-specific lipopolysaccharide biosynthesis
            region (rfb) of Escherichia coli K-12 W3110: identification of
            genes that confer group 6 specificity to Shigella flexneri
            serotypes Y and 4a
  JOURNAL   J Bacteriol 176 (13), 4133-4143 (1994)
   PUBMED   7517390
REFERENCE   2  (residues 1 to 517)
  AUTHORS   Becker,A., Kleickmann,A., Kuster,H., Keller,M., Arnold,W. and
            Puhler,A.
  TITLE     Analysis of the Rhizobium meliloti genes exoU, exoV, exoW, exoT,
            and exoI involved in exopolysaccharide biosynthesis and nodule
            invasion: exoU and exoW probably encode glucosyltransferases
  JOURNAL   Mol Plant Microbe Interact 6 (6), 735-744 (1993)
   PUBMED   8118055
REFERENCE   3  (residues 1 to 517)
  AUTHORS   Popham,D.L. and Stragier,P.
  TITLE     Cloning, characterization, and expression of the spoVB gene of
            Bacillus subtilis
  JOURNAL   J Bacteriol 173 (24), 7942-7949 (1991)
   PUBMED   1744050
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014051.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01943.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Tautonia rosea"
                     /db_xref="taxon:2728037"
     Protein         1..517
                     /product="oligosaccharide flippase family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=55281
     Region          54..451
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 mpstsslrsp vrpprppaal psdwdqdlsa aplappvavh eappsaqasn srrmasnfaa
       61 lsaaeiacra ismvvtlala qrlgregygr iefafnvvfw lvllvregld viatreiarh
      121 prlirplvnh ilairgclav alltglvavg wfafsepsew lllslyglml lstaigldfv
      181 yrglermtlv avsllirtai yalgvglwvt ditriewvpi clvagelcgi alvwacylrs
      241 fgpprltlrg tralrtilrr grpvyviqvs qavigsadll ivgllsqwad vglygaphrv
      301 vaailtfgii frqvvfpmla rcwrsspaeg qaaldgmvra lmlglvpvav gatvladpli
      361 glllgpeyag aglllavgaw riplltlafl yqsalialnr eaagvrmlig aavligplta
      421 vfrlqfglvg aaeavlivas lltlagyrrl raegrapawh hhlgppllas lmmvpvclvl
      481 alwhvvpavl ggaavylgtl vllnalpmte lrcllrr
//
LOCUS       WP_235963689             999 aa            linear   BCT 02-MAR-2025
DEFINITION  protein kinase domain-containing protein [Tautonia rosea].
ACCESSION   WP_235963689
VERSION     WP_235963689.1
KEYWORDS    RefSeq.
SOURCE      Tautonia rosea
  ORGANISM  Tautonia rosea
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Isosphaerales; Isosphaeraceae; Tautonia.
REFERENCE   1  (residues 1 to 999)
  AUTHORS   Hunter,T. and Plowman,G.D.
  TITLE     The protein kinases of budding yeast: six score and more
  JOURNAL   Trends Biochem Sci 22 (1), 18-22 (1997)
   PUBMED   9020587
REFERENCE   2  (residues 1 to 999)
  AUTHORS   Hanks,S.K. and Hunter,T.
  TITLE     Protein kinases 6. The eukaryotic protein kinase superfamily:
            kinase (catalytic) domain structure and classification
  JOURNAL   FASEB J 9 (8), 576-596 (1995)
   PUBMED   7768349
REFERENCE   3  (residues 1 to 999)
  AUTHORS   Hanks,S.K. and Quinn,A.M.
  TITLE     Protein kinase catalytic domain sequence database: identification
            of conserved features of primary structure and classification of
            family members
  JOURNAL   Methods Enzymol 200, 38-62 (1991)
   PUBMED   1956325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00069.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Tautonia rosea"
                     /db_xref="taxon:2728037"
     Protein         1..999
                     /product="protein kinase domain-containing protein"
                     /GO_function="GO:0004672 - protein kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006468 - protein phosphorylation
                     [Evidence IEA]"
                     /calculated_mol_wt=109860
     Region          77..590
                     /region_name="SPS1"
                     /note="Serine/threonine protein kinase [Signal
                     transduction mechanisms]; COG0515"
                     /db_xref="CDD:440281"
     Region          <496..766
                     /region_name="FxSxx_TPR"
                     /note="FxSxx-COOH system tetratricopeptide repeat protein;
                     NF040586"
                     /db_xref="CDD:468560"
ORIGIN      
        1 msertifmea ldfedpdaqr afldqacqrn valrarvesl lqshrkagdf ldddpahlls
       61 teaggplaep sieaigtvig pytllepige ggmgtvymad qerpvrrrva lkvikpgmdt
      121 kqviarfeae rqalalmdhp niarvldagt ndsgrpyfvm elvkglpite fcdrhrldiq
      181 erldlfvrvc qavqhahqkg iihrdlkpsn ilvtlhdgep vpkvidfgia katsqsltdk
      241 tlftgfaqlv gtpqymspeq aefsgldidt rsdiyslgvl lyelltgstp iqreefqrap
      301 ldqirrlihd reavtpstrl sglgkslsti sasrgadprr ilvavrgdld wivmkclekk
      361 rdrryetana laaelrrhln nepvlarpps aayqfqkfas rnrailtstv livlvlvtat
      421 vlsllqahra traeaqaaas aeetslvvey lvndvfgaaa perlqgktpt lqdifvagea
      481 aiparfghhp taeasarial grayydlgry edaapqfrla aalraehlgp dhpqtltaea
      541 mvvralcpda lglvaipdea epiarrvmet rrrvlgpndr qtldsmttlg hvlqvkfnka
      601 llerfrkapn lslsdevlrt lgtvpmgeaq tlledayqgq trllgpdhpe tletlhvlgr
      661 vlyckadhvn servlrqava grdrvlgadh patlasrkfl attlqrrqqn eeaillyaqv
      721 aeahrrlfgs thiqtssaln hylgtcralg qfetirevse rwlrdllatp ipsdayqqsr
      781 rcirlehlai ylatlpasvp vdsdlatraa qeavtilgsp kawsalalvl hragqfelal
      841 eaiqasadhp dfiggfgfyw calaqlqlha gdveaarasy ersfldksep wlaelqvlqn
      901 eiatrllevd spastrrppa lspnsqdlrs lvsathmkis lfligqdgsp sealrndrai
      961 sqetnhtafs ntgghnsgsr fiidqdcgti gprltggpc
//
LOCUS       WP_235963711             429 aa            linear   BCT 02-MAR-2025
DEFINITION  heparin lyase I family protein [Tautonia rosea].
ACCESSION   WP_235963711
VERSION     WP_235963711.1
KEYWORDS    RefSeq.
SOURCE      Tautonia rosea
  ORGANISM  Tautonia rosea
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Isosphaerales; Isosphaeraceae; Tautonia.
REFERENCE   1  (residues 1 to 429)
  AUTHORS   Han,Y.H., Garron,M.L., Kim,H.Y., Kim,W.S., Zhang,Z., Ryu,K.S.,
            Shaya,D., Xiao,Z., Cheong,C., Kim,Y.S., Linhardt,R.J., Jeon,Y.H.
            and Cygler,M.
  TITLE     Structural snapshots of heparin depolymerization by heparin lyase I
  JOURNAL   J Biol Chem 284 (49), 34019-34027 (2009)
   PUBMED   19801541
REFERENCE   2  (residues 1 to 429)
  AUTHORS   Konno,N., Ishida,T., Igarashi,K., Fushinobu,S., Habu,N.,
            Samejima,M. and Isogai,A.
  TITLE     Crystal structure of polysaccharide lyase family 20
            endo-beta-1,4-glucuronan lyase from the filamentous fungus
            Trichoderma reesei
  JOURNAL   FEBS Lett 583 (8), 1323-1326 (2009)
   PUBMED   19306878
REFERENCE   3  (residues 1 to 429)
  AUTHORS   Konno,N., Igarashi,K., Habu,N., Samejima,M. and Isogai,A.
  TITLE     Cloning of the Trichoderma reesei cDNA encoding a glucuronan lyase
            belonging to a novel polysaccharide lyase family
  JOURNAL   Appl Environ Microbiol 75 (1), 101-107 (2009)
   PUBMED   18978091
REFERENCE   4  (residues 1 to 429)
  AUTHORS   Ernst,S., Venkataraman,G., Winkler,S., Godavarti,R., Langer,R.,
            Cooney,C.L. and Sasisekharan,R.
  TITLE     Expression in Escherichia coli, purification and characterization
            of heparinase I from Flavobacterium heparinum
  JOURNAL   Biochem J 315 (Pt 2) (Pt 2), 589-597 (1996)
   PUBMED   8615834
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025464.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14099.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Tautonia rosea"
                     /db_xref="taxon:2728037"
     Protein         1..429
                     /product="heparin lyase I family protein"
                     /calculated_mol_wt=47992
     Region          199..418
                     /region_name="Alginate_lyase2"
                     /note="Alginate lyase; cl21738"
                     /db_xref="CDD:451375"
ORIGIN      
        1 mkcclamvvc ltwtacevrs depipvgawf dyhpdqyvvi dsetglawpa geallpppyg
       61 qillkgkfhw vtttglrdfe atkyasghtn wriptiaelr tarqhglyea lvevarlegy
      121 pypmpvvrfg lfgswasdvs ssnrrawvnl lgplhqevrw wpthwgsrpy lpvretaqpt
      181 pilwaddiqe gqrpwgfsgl ftqydgkave pddanganis rvpdpaggpg famrhfavfg
      241 pkvgrsqagi wsfknpvfae qakseegvyi aqewyfpeal sangrgtpwi slwdwhsvgp
      301 ngsnrwhtsp gmfltkdgsm rfnlkwhsgs tgnptsalst iplpvgrwfd vemyykwttg
      361 pttikvwidg elaveqtvpw trhpdhnvve tymkfygaap sttpwsptps vrytrnvria
      421 adrigpggn
//
LOCUS       WP_235963871             823 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1553 domain-containing protein [Tautonia rosea].
ACCESSION   WP_235963871
VERSION     WP_235963871.1
KEYWORDS    RefSeq.
SOURCE      Tautonia rosea
  ORGANISM  Tautonia rosea
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Isosphaerales; Isosphaeraceae; Tautonia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019223.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07587.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Tautonia rosea"
                     /db_xref="taxon:2728037"
     Protein         1..823
                     /product="DUF1553 domain-containing protein"
                     /calculated_mol_wt=92682
     Region          <10..134
                     /region_name="CccA"
                     /note="Cytochrome c, mono- and diheme variants [Energy
                     production and conversion]; COG2010"
                     /db_xref="CDD:441613"
     Region          51..111
                     /region_name="PSCyt1"
                     /note="Planctomycete cytochrome C; pfam07635"
                     /db_xref="CDD:429568"
     Region          161..367
                     /region_name="PSCyt2"
                     /note="Protein of unknown function (DUF1549); pfam07583"
                     /db_xref="CDD:429550"
     Region          523..780
                     /region_name="PSD1"
                     /note="Protein of unknown function (DUF1553); pfam07587"
                     /db_xref="CDD:429553"
ORIGIN      
        1 mtqlrpprtm avgwifllmv splvfphsgl aeeersidfa teirpilsdt cvrchgpdas
       61 qraaglrldt pegaladlgg yaaivpgspe eselflrite dmadfrmppp dsgkslsdaq
      121 velirqwiaq gapwedhwaf tpplrpelpa vkesswvrnp idafilaple qdgiapstea
      181 dratlirras ldvtglpptp edvqafladd rpdayehlid rllasphyge rwgrrwldna
      241 ryadsngysi dapreiwlyr dwvidslnrd lpfdeftidq iagdlrpdas mpqlvatgfh
      301 rntpinqegg idreqfries vidrvnttgs vwlgltigca qchdhkydpi sqqdyfqffa
      361 flntvdepti pvaseedvar rdevnqaisd ylarierdpd llnrqhawei gldgagrqkq
      421 sqevreafdl pfekrpadrn rvvfaafidq sddpivaphr taiatlkqel pkipttmvvr
      481 eqnvprtthf ltagdftrpg dpvepdvpsv lppltrssdt ranrldlarw lvdpdhplta
      541 rvavnrlwqa yfgrgivetd edfgtqgtlp shpdlldwla vefveqgwsl ktmhrlilts
      601 styrqssrlr pdlidrdptn rrlarqsrlr ldaelirdsa lvasglltet vggpsvfppq
      661 pdgvmslgqm rrewvtdtgp nrfrrglytf fwratphpll vgfdapdatf actrrtrsnt
      721 plqalmllnd qafyefaqal adrllaegpl ddtkrldlaf rlclarspdp veldrlnafl
      781 seqrslnsgs gdddhsktdh seraawtaia rvllnldefi tre
//
LOCUS       WP_235963693             207 aa            linear   BCT 02-MAR-2025
DEFINITION  ECF-type sigma factor [Tautonia rosea].
ACCESSION   WP_235963693
VERSION     WP_235963693.1
KEYWORDS    RefSeq.
SOURCE      Tautonia rosea
  ORGANISM  Tautonia rosea
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Isosphaerales; Isosphaeraceae; Tautonia.
REFERENCE   1  (residues 1 to 207)
  AUTHORS   Helmann,J.D.
  TITLE     The extracytoplasmic function (ECF) sigma factors
  JOURNAL   Adv Microb Physiol 46, 47-110 (2002)
   PUBMED   12073657
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019265.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07638.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Tautonia rosea"
                     /db_xref="taxon:2728037"
     Protein         1..207
                     /product="ECF-type sigma factor"
                     /calculated_mol_wt=23262
     Region          8..205
                     /region_name="Sigma70_ECF"
                     /note="ECF sigma factor; pfam07638"
                     /db_xref="CDD:254323"
ORIGIN      
        1 mepthssmgs vtrwigdlke gdseaasqlw rryfaslvtl arkrmegrrr saasdeedaa
       61 lsafhslcrg aaqghfdqls drddlwrllv vlttrkaldq qnrerrlkrg ggrvlheael
      121 gkgmddpgla igldrivgse ptpefaalva eeyarrldal daplreialw rlegygndei
      181 avrlgcstrt verkldlirr twkedft
//
LOCUS       WP_235964021             266 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6065 family protein [Brucella pseudintermedia].
ACCESSION   WP_235964021
VERSION     WP_235964021.1
KEYWORDS    RefSeq.
SOURCE      Brucella pseudintermedia (Ochrobactrum pseudintermedium)
  ORGANISM  Brucella pseudintermedia
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 266)
  AUTHORS   Burgard,C., Zaburannyi,N., Nadmid,S., Maier,J., Jenke-Kodama,H.,
            Luxenburger,E., Bernauer,H.S. and Wenzel,S.C.
  TITLE     Genomics-Guided Exploitation of Lipopeptide Diversity in
            Myxobacteria
  JOURNAL   ACS Chem Biol 12 (3), 779-786 (2017)
   PUBMED   28128551
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039976.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19541.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Brucella pseudintermedia"
                     /db_xref="taxon:370111"
     Protein         1..266
                     /product="DUF6065 family protein"
                     /calculated_mol_wt=30118
     Region          22..257
                     /region_name="DUF6065"
                     /note="Family of unknown function (DUF6065); pfam19541"
                     /db_xref="CDD:437373"
ORIGIN      
        1 mallqaspqq yaiggsismk qlvayvlegh dfhirpaple rpwmdetaqr fayrclplni
       61 anthgweilc tsafsaiwdg rpttdavrve aklskesppg tshfgdgilt fhvpclfrte
      121 pgtdlfvmgp vnrpkdgiap lsgvietdws pytftmnwkf trpnhevhfd idepfchifp
      181 vqrgsleniv ptirklsdkt dlerehhiws rqrnafiadl anpaskatkd kwqkgyfrgv
      241 tpsgsqgpdd hqtklrlqpf eermhe
//
LOCUS       WP_235964165             290 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Brucella
            pseudintermedia].
ACCESSION   WP_235964165
VERSION     WP_235964165.1
KEYWORDS    RefSeq.
SOURCE      Brucella pseudintermedia (Ochrobactrum pseudintermedium)
  ORGANISM  Brucella pseudintermedia
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 290)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 290)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 290)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Brucella pseudintermedia"
                     /db_xref="taxon:370111"
     Protein         1..290
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=31526
     Region          34..286
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(61,77..78,99,183)
                     /site_type="active"
                     /note="siderophore binding site [active]"
                     /db_xref="CDD:238566"
ORIGIN      
        1 mtvsrrtvlg fagalfaapa lrsaraarvr faaidwamle talaigavpv aaaelrqyrq
       61 mqlepalpds vadlglrgap nlellrmiep nlivasnfye yqraaleria pvfaptvysa
      121 gqlpyamlee atsslgeklg laaegrayva tvareigear qhlasvsgrk vfvislgdar
      181 hfrafgrdsl fgdvlvrldf enawtretsy saaapvgleq laempdasiv vvgptdpetl
      241 yrlpqnalwn alpairekrv lflppldhfg glpaarrfaq llrenwkssl
//
LOCUS       WP_235964198             195 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Pseudoflavonifractor
            gallinarum].
ACCESSION   WP_235964198
VERSION     WP_235964198.1
KEYWORDS    RefSeq.
SOURCE      Pseudoflavonifractor gallinarum
  ORGANISM  Pseudoflavonifractor gallinarum
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Pseudoflavonifractor.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025107.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13730.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Pseudoflavonifractor gallinarum"
                     /db_xref="taxon:2779352"
     Protein         1..195
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=21694
     Region          24..>143
                     /region_name="YrhO"
                     /note="Sugar-specific transcriptional regulator TrmB
                     [Transcription]; COG1378"
                     /db_xref="CDD:440988"
     Region          26..80
                     /region_name="HTH_36"
                     /note="Helix-turn-helix domain; pfam13730"
                     /db_xref="CDD:463970"
ORIGIN      
        1 mkfqqwpkrd prknyflvpn evfhiglnhp eisiycylls ienrktyqcw psyktigkal
       61 gmcentvsky vrsleekgli hteptmirsk dgrplngnll yticpiqaav esfyerqlrq
      121 leedaarqra aerlaesarr spqnalcapl gepagldtps gvesgfgpls gafpelppes
      181 lpgveekagt kekag
//
LOCUS       WP_235964359             491 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6138 family protein [Pseudoflavonifractor gallinarum].
ACCESSION   WP_235964359
VERSION     WP_235964359.1
KEYWORDS    RefSeq.
SOURCE      Pseudoflavonifractor gallinarum
  ORGANISM  Pseudoflavonifractor gallinarum
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Pseudoflavonifractor.
REFERENCE   1  (residues 1 to 491)
  AUTHORS   Yang,X. and Yousef,A.E.
  TITLE     Antimicrobial peptides produced by Brevibacillus spp.: structure,
            classification and bioactivity: a mini review
  JOURNAL   World J Microbiol Biotechnol 34 (4), 57 (2018)
   PUBMED   29594558
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040333.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19635.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Pseudoflavonifractor gallinarum"
                     /db_xref="taxon:2779352"
     Protein         1..491
                     /product="DUF6138 family protein"
                     /calculated_mol_wt=56454
     Region          <113..400
                     /region_name="DUF6138"
                     /note="Family of unknown function (DUF6138); pfam19635"
                     /db_xref="CDD:437467"
ORIGIN      
        1 mslpkrnsad grcywmkpev qeelqplfdq ciqdaidgri trldslwppv vvssqgapfa
       61 vhdlvrkwie tqraetmdae kaiafsenlr rqsrwgeidh hlldmlkrel qekyfvatgd
      121 eddrfwnrey slkpgiraee vpepllrfac yvavsykvyg ldfeyldtny lfglvekvrp
      181 dmvkklrehg tgrlplslqk rktehftasa ndafavirit ardnteeccy evldylceil
      241 eqedfprsya vefkgpeksy lpitglpkkg inqlfacavq ypglhslmer yarlamrqye
      301 qytnlsdeqc alpgsfavfa lgmlgqewrq llwdyldlcd dehshlqekf lreyvkqfgf
      361 tadtvpvfvr gvlsmqnmky skdyaawman aesldallea kihlsetvps gfssdedddd
      421 dedeepaeet easpeevlqy awetvcyviw gkasakggqk vveaaseelk klyrqifipi
      481 tknlegsgdl l
//
LOCUS       WP_235964367             371 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Pseudoflavonifractor
            gallinarum].
ACCESSION   WP_235964367
VERSION     WP_235964367.1
KEYWORDS    RefSeq.
SOURCE      Pseudoflavonifractor gallinarum
  ORGANISM  Pseudoflavonifractor gallinarum
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Pseudoflavonifractor.
REFERENCE   1  (residues 1 to 371)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 371)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 371)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Pseudoflavonifractor gallinarum"
                     /db_xref="taxon:2779352"
     Protein         1..371
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=39902
     Region          49..343
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(142..143,146,176)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238347"
ORIGIN      
        1 mkrnlrrtsg laalllalal lagctqsssv ptaspaadps aqqteqtgqr eitdmagrtm
       61 tvpeeiqsaf stgpvsaiyl ytlvpdkllg wnyelndiek siilpeyhdl pnfgmgdsvn
      121 yeaviaagpt iafhvsaine gtkdeadqls qqlgipvvmv sseledaaev yrfmgelfgv
      181 eeqaeilaey aeavfadiaa idvseeekvr vyygngensl etapagsshg aildavkavn
      241 vadlelgdgs rvqisleqll awdpdvivvn gepksnmsgg aaaqsilsnp dfatlkavqe
      301 gkvygtpnap fswvdrppgp nrlvgirwla gllypdrvpy dvdeevkeff qlfyhvdlse
      361 eqlaqlyagt i
//
LOCUS       WP_235964378             160 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6883 domain-containing protein [Pseudoflavonifractor
            gallinarum].
ACCESSION   WP_235964378
VERSION     WP_235964378.1
KEYWORDS    RefSeq.
SOURCE      Pseudoflavonifractor gallinarum
  ORGANISM  Pseudoflavonifractor gallinarum
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Pseudoflavonifractor.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF045464.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21814.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Pseudoflavonifractor gallinarum"
                     /db_xref="taxon:2779352"
     Protein         1..160
                     /product="DUF6883 domain-containing protein"
                     /calculated_mol_wt=18387
ORIGIN      
        1 mdnhsegkth ceeclkldgc wfqkekappc phhpfchctl epvdyavvli ntsaysdyrk
       61 fdpylfnttg lqthnkeklf kewgytveda rwlqaeierq aeeryiagky tlgklnwngq
      121 risirviipr rdgtgevsfi tgwmvepggk lrmttpyggk
//
LOCUS       WP_235964482             262 aa            linear   BCT 02-MAR-2025
DEFINITION  heparin lyase I family protein [Pedobacter gandavensis].
ACCESSION   WP_235964482
VERSION     WP_235964482.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter gandavensis
  ORGANISM  Pedobacter gandavensis
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
REFERENCE   1  (residues 1 to 262)
  AUTHORS   Han,Y.H., Garron,M.L., Kim,H.Y., Kim,W.S., Zhang,Z., Ryu,K.S.,
            Shaya,D., Xiao,Z., Cheong,C., Kim,Y.S., Linhardt,R.J., Jeon,Y.H.
            and Cygler,M.
  TITLE     Structural snapshots of heparin depolymerization by heparin lyase I
  JOURNAL   J Biol Chem 284 (49), 34019-34027 (2009)
   PUBMED   19801541
REFERENCE   2  (residues 1 to 262)
  AUTHORS   Konno,N., Ishida,T., Igarashi,K., Fushinobu,S., Habu,N.,
            Samejima,M. and Isogai,A.
  TITLE     Crystal structure of polysaccharide lyase family 20
            endo-beta-1,4-glucuronan lyase from the filamentous fungus
            Trichoderma reesei
  JOURNAL   FEBS Lett 583 (8), 1323-1326 (2009)
   PUBMED   19306878
REFERENCE   3  (residues 1 to 262)
  AUTHORS   Konno,N., Igarashi,K., Habu,N., Samejima,M. and Isogai,A.
  TITLE     Cloning of the Trichoderma reesei cDNA encoding a glucuronan lyase
            belonging to a novel polysaccharide lyase family
  JOURNAL   Appl Environ Microbiol 75 (1), 101-107 (2009)
   PUBMED   18978091
REFERENCE   4  (residues 1 to 262)
  AUTHORS   Ernst,S., Venkataraman,G., Winkler,S., Godavarti,R., Langer,R.,
            Cooney,C.L. and Sasisekharan,R.
  TITLE     Expression in Escherichia coli, purification and characterization
            of heparinase I from Flavobacterium heparinum
  JOURNAL   Biochem J 315 (Pt 2) (Pt 2), 589-597 (1996)
   PUBMED   8615834
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025464.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14099.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Pedobacter gandavensis"
                     /db_xref="taxon:2679963"
     Protein         1..262
                     /product="heparin lyase I family protein"
                     /calculated_mol_wt=28868
     Region          65..252
                     /region_name="Alginate_lyase2"
                     /note="Alginate lyase; cl21738"
                     /db_xref="CDD:451375"
ORIGIN      
        1 mmkknqlmiv vlmsgsllls scekeksava elklstpvlk vspgenqvaa vlfngdasrg
       61 senvwkaini egtgalstvt detgvltwkf lkplnshrte vrgaknfqaa egdeiyigft
      121 skllipsnlk teaifqwksy ptegslqnhp lmlrtkggkl elqhfddshv atvpwsinlp
      181 vntwmsfvir mkvsrnpsvg fiefwyngvk qtlangterl tcrtldvadc dpkwgvyggd
      241 eaevthyvkk irigttyada aq
//
LOCUS       WP_235964555             624 aa            linear   BCT 02-MAR-2025
DEFINITION  alkaline phosphatase [Pedobacter gandavensis].
ACCESSION   WP_235964555
VERSION     WP_235964555.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter gandavensis
  ORGANISM  Pedobacter gandavensis
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012470.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00245.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Pedobacter gandavensis"
                     /db_xref="taxon:2679963"
     Protein         1..624
                     /product="alkaline phosphatase"
                     /EC_number="3.1.3.1"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=68257
     Region          33..251
                     /region_name="PI-PLCc_GDPD_SF_unchar3"
                     /note="Uncharacterized hypothetical proteins similar to
                     the catalytic domains of Phosphoinositide-specific
                     phospholipaseand Glycerophosphodiester phosphodiesterases;
                     cd08577"
                     /db_xref="CDD:176519"
     Site            order(35,56,58,113,152,228)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176519"
     Site            order(35,70)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176519"
     Region          272..619
                     /region_name="PhoA"
                     /note="Alkaline phosphatase [Inorganic ion transport and
                     metabolism, General function prediction only]; COG1785"
                     /db_xref="CDD:441391"
ORIGIN      
        1 mdlkniihaa vfagvllamd asaqhtlsfn sghshndyhq niplltayya gmgaieadvf
       61 lkngvlyvah dpseikadat lkalylepla kfhkqngnkp yadpkmklql vidikenypm
      121 vlaqlikdls aypgvfndqm spdairivis gdvpkpqnfe nypaylsfdg rpnvnytpdq
      181 lkriamisdd lknytswngk gnptptdlav lkklidaahs qhkpfrfwat qdspntwivl
      241 erlgadwint dqpgklkdfy vhkdkltytn pvaypvytpe ykvdgidkpv knvilligdg
      301 mglaqihagy ianhgqlnis kvhnigfsqt aaadagntds aagasamaig ektnnryigl
      361 gpdgrkltnl vdtladygik sgiisvgdlt datpaafyah qidramseei aadllqskae
      421 iligsnqksf lknkdgnlis klkkqgfqws teaadffkqt qgkhlvvlpd satrpvkngr
      481 gdllkaslqh tlkilsannn gffimaegaq idygghvndl pyivtelhdf dravaaalqf
      541 adqnketlvl itadhetggl tlldasaeng mvtgsfstnd htnimvpvfa ygpgsaafkg
      601 tyqnqelfhk llkvmdlkkr kklk
//
LOCUS       WP_235964690             283 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein [Caenimonas
            soli].
ACCESSION   WP_235964690
VERSION     WP_235964690.1
KEYWORDS    RefSeq.
SOURCE      Caenimonas soli
  ORGANISM  Caenimonas soli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Caenimonas.
REFERENCE   1  (residues 1 to 283)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Caenimonas soli"
                     /db_xref="taxon:2735555"
     Protein         1..283
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=29563
     Region          48..268
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mkedheknig tenamrthwl magilglllt gcagihtapa pearqalapt gklrvglylg
       61 nplsvvrdsa sgemkgvgfd lgkelarrma vpfepvvyps vaalvgsaks ggwdvasial
      121 sparakdmdf taphlevelg ylipgsssia taadvdrpgi rvamqekgla dtllsptlkn
      181 avvvrassia gtleivrsgr advfagnkps lfeisdqmpg frvldgrfat dpvamaipkg
      241 relamayark fvedaksegl vkaaleragi rgavvaapnp aqr
//
LOCUS       WP_235964718             326 aa            linear   BCT 02-MAR-2025
DEFINITION  PEP-CTERM sorting domain-containing protein [Sediminihaliea
            albiluteola].
ACCESSION   WP_235964718
VERSION     WP_235964718.1
KEYWORDS    RefSeq.
SOURCE      Sediminihaliea albiluteola
  ORGANISM  Sediminihaliea albiluteola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cellvibrionales; Halieaceae; Sediminihaliea.
REFERENCE   1  (residues 1 to 326)
  AUTHORS   Haft,D.H., Paulsen,I.T., Ward,N. and Selengut,J.D.
  TITLE     Exopolysaccharide-associated protein sorting in environmental
            organisms: the PEP-CTERM/EpsH system. Application of a novel
            phylogenetic profiling heuristic
  JOURNAL   BMC Biol 4, 29 (2006)
   PUBMED   16930487
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019225.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07589.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Sediminihaliea albiluteola"
                     /db_xref="taxon:2758564"
     Protein         1..326
                     /product="PEP-CTERM sorting domain-containing protein"
                     /calculated_mol_wt=34869
     Region          <245..324
                     /region_name="PEP_NF038129"
                     /note="NF038129 family PEP-CTERM protein"
                     /db_xref="CDD:468372"
     Region          301..322
                     /region_name="PEP-CTERM"
                     /note="PEP-CTERM motif; pfam07589"
                     /db_xref="CDD:377877"
ORIGIN      
        1 mttsakaagq vaarkmqigr gallastfvl atfaseatma alvsnnncsi pgvntftvdr
       61 invtanssyd dgaqvwatgg qglsgvystc rgfydgndkn dghvggvaqp krnigwrddg
      121 llnfvefdgl ltgsqstqdi pgntatddpg wirlgeadtd kkedkdskgi syasiiydts
      181 pngfeidlge ylefsmdfse agtwslkvdp dfvtlgqqrl gldafdhlaf vvkqgnksgk
      241 hgpegfavyd fnfqqfidqn ildqstaynf ygsfdltgih gtgfshvsvw ardpvttatn
      301 vpapatlalf alglfglgws rrkqka
//
LOCUS       WP_235964905             291 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6279 family lipoprotein [Caenimonas soli].
ACCESSION   WP_235964905
VERSION     WP_235964905.1
KEYWORDS    RefSeq.
SOURCE      Caenimonas soli
  ORGANISM  Caenimonas soli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Caenimonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039714.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19795.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Caenimonas soli"
                     /db_xref="taxon:2735555"
     Protein         1..291
                     /product="DUF6279 family lipoprotein"
                     /calculated_mol_wt=32873
     Region          45..244
                     /region_name="DUF6279"
                     /note="Family of unknown function (DUF6279); pfam19795"
                     /db_xref="CDD:437627"
ORIGIN      
        1 mttisstvar iigllavaaa lagcsaiklg ynnlgevayw wldgyidfte eqaapvredl
       61 grlhlwhrtq elprlqavlr afeelvpgdi saaqacafvp qlrerlqavt esaepavvtl
      121 amglgpeqlr hlerkyqknn adfrkawgql spselidkrl qqflersemi ygrldapqrs
      181 alrrhieqsi fdpqrilaer qrrqqdalqt lrklagqpvp fseargllrg ylqraqyspd
      241 payrsyqqal meeacrgvsv lhnstvgaqr eaavqrlray qrdlrelsaq q
//
LOCUS       WP_235964209             166 aa            linear   BCT 02-MAR-2025
DEFINITION  spore coat protein CotJB [Pseudoflavonifractor gallinarum].
ACCESSION   WP_235964209
VERSION     WP_235964209.1
KEYWORDS    RefSeq.
SOURCE      Pseudoflavonifractor gallinarum
  ORGANISM  Pseudoflavonifractor gallinarum
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Oscillospiraceae; Pseudoflavonifractor.
REFERENCE   1  (residues 1 to 166)
  AUTHORS   Kuwana,R., Kasahara,Y., Fujibayashi,M., Takamatsu,H., Ogasawara,N.
            and Watabe,K.
  TITLE     Proteomics characterization of novel spore proteins of Bacillus
            subtilis
  JOURNAL   Microbiology (Reading) 148 (Pt 12), 3971-3982 (2002)
   PUBMED   12480901
REFERENCE   2  (residues 1 to 166)
  AUTHORS   Henriques,A.O., Beall,B.W., Roland,K. and Moran,C.P. Jr.
  TITLE     Characterization of cotJ, a sigma E-controlled operon affecting the
            polypeptide composition of the coat of Bacillus subtilis spores
  JOURNAL   J Bacteriol 177 (12), 3394-3406 (1995)
   PUBMED   7768848
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024065.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12652.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Pseudoflavonifractor gallinarum"
                     /db_xref="taxon:2779352"
     Protein         1..166
                     /product="spore coat protein CotJB"
                     /calculated_mol_wt=18485
     Region          37..72
                     /region_name="CotJA"
                     /note="Spore coat associated protein JA (CotJA);
                     pfam11007"
                     /db_xref="CDD:463206"
     Region          86..158
                     /region_name="CotJB"
                     /note="CotJB protein; pfam12652"
                     /db_xref="CDD:463656"
ORIGIN      
        1 mypdtnsrap gsrmeqapga endrcsdgcg plpecaplav pyvafqqtys krynrqealn
       61 ngtlfpglnl pfhlkpeaad vvngplaelq alefvlvelg qyldthqsdq eafalyqqya
      121 ameeegrrqy ealhgplrqt atassenwtq wlkdpwpwnl aeggkr
//
LOCUS       WP_235965105             265 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Kingella
            bonacorsii].
ACCESSION   WP_235965105
VERSION     WP_235965105.1
KEYWORDS    RefSeq.
SOURCE      Kingella bonacorsii
  ORGANISM  Kingella bonacorsii
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Kingella.
REFERENCE   1  (residues 1 to 265)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Kingella bonacorsii"
                     /db_xref="taxon:2796361"
     Protein         1..265
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=28409
     Region          1..>239
                     /region_name="PRK12682"
                     /note="transcriptional regulator CysB-like protein;
                     Reviewed"
                     /db_xref="CDD:183679"
ORIGIN      
        1 mklqqlryav evfrhnlnvs eaaealftsq pgvskqirll edelgvqifi rsgkrivavt
       61 qvgmavleta eqvlrgvrni kniggefakt esgsftlgat hdllrfrlps vlagfralfp
      121 dvhlvlkqgs paelmgmvfn geadlaltmd vagngedlrk lsfgewryvl vlprghelas
      181 kgeisladva alplltygfa fdggalaara fararlswht vfesddggvl ldyvrlglga
      241 vsftpltlpt apfgwglggg gvvkk
//
LOCUS       WP_235965168              37 aa            linear   BCT 02-MAR-2025
DEFINITION  AraC family transcriptional regulator [Caenimonas soli].
ACCESSION   WP_235965168
VERSION     WP_235965168.1
KEYWORDS    RefSeq.
SOURCE      Caenimonas soli
  ORGANISM  Caenimonas soli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Caenimonas.
REFERENCE   1  (residues 1 to 37)
  AUTHORS   Saviola,B., Seabold,R. and Schleif,R.F.
  TITLE     Arm-domain interactions in AraC
  JOURNAL   J Mol Biol 278 (3), 539-548 (1998)
   PUBMED   9600837
REFERENCE   2  (residues 1 to 37)
  AUTHORS   Seabold,R.R. and Schleif,R.F.
  TITLE     Apo-AraC actively seeks to loop
  JOURNAL   J Mol Biol 278 (3), 529-538 (1998)
   PUBMED   9600836
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012392.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00165.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..37
                     /organism="Caenimonas soli"
                     /db_xref="taxon:2735555"
     Protein         1..37
                     /product="AraC family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=3915
     Region          <5..34
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
ORIGIN      
        1 malcdiaqaa gftdqsqltr tfrkqmgitp aayragr
//
LOCUS       WP_235965193             782 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Caenimonas soli].
ACCESSION   WP_235965193
VERSION     WP_235965193.1
KEYWORDS    RefSeq.
SOURCE      Caenimonas soli
  ORGANISM  Caenimonas soli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Caenimonas.
REFERENCE   1  (residues 1 to 782)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Caenimonas soli"
                     /db_xref="taxon:2735555"
     Protein         1..782
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=83843
     Region          3..230
                     /region_name="MASE4"
                     /note="Membrane-associated sensor, integral membrane
                     domain; cl29069"
                     /db_xref="CDD:452914"
     Region          244..510
                     /region_name="KdpD"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; COG2205"
                     /db_xref="CDD:441807"
     Region          530..>645
                     /region_name="RpfG"
                     /note="Response regulator c-di-GMP phosphodiesterase, RpfG
                     family, contains REC and HD-GYP domains [Signal
                     transduction mechanisms]; COG3437"
                     /db_xref="CDD:442663"
     Region          656..>736
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
ORIGIN      
        1 mqvpafipvy qsalvvcdll taillwgqyg ilrsrallvl aagylfsalm avahalsfpg
       61 lfaagglfga grqttawlyf lwhggfplfv igyallkggt rdgstaptdp rieilisafv
      121 alacaggltv lttvghstlp pimagnadas tkvyvaaatw lfglgalfiv wrrrphsvld
      181 lwlmvvlcvw tadsalaavf ngarydlgwy agriygllas gfvlvlllle ngalhaqlae
      241 ahdalaekna qlaqasrlks eflanmshel rtplnavigf sevlkdglag elvaeqrnyv
      301 tdiytsgqhl lslindildl skieagqmml dlestaaatl fehslsivre kaakrrlhls
      361 idvprelgsl lldprktkqi lynllsnavk ftqeggsvtl rarrvaradv eswsdgastv
      421 lrmpmatvqf esylqivved tgigiapeda srlfrmfsql dssltkeveg tglglvlveh
      481 larlhgggva iastpaegsr lfvwlpwrda gaaaeqlagp aargavpagr plalviednd
      541 haaelirvql epagfkivra atarkalewl vtgqptvvvl dlllpdmdgw dllgllkqpn
      601 satahipvvi vsivadmhkg fslgasdvlq kpvsreelld alanvgvngm grpvtrvlvv
      661 dddpkavsll aaylrgprys vlmahggkeg iemaqrerpd livldlmmpe vsgfdvvevl
      721 kdnhetatip ivvvtaktlt aqdkatlngl vavvlgkatf nhgrfvnevr ralaaerpev
      781 lt
//
LOCUS       WP_235964970             176 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Kingella bonacorsii].
ACCESSION   WP_235964970
VERSION     WP_235964970.1
KEYWORDS    RefSeq.
SOURCE      Kingella bonacorsii
  ORGANISM  Kingella bonacorsii
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Kingella.
REFERENCE   1  (residues 1 to 176)
  AUTHORS   Koropatkin,N.M., Pakrasi,H.B. and Smith,T.J.
  TITLE     Atomic structure of a nitrate-binding protein crucial for
            photosynthetic productivity
  JOURNAL   Proc Natl Acad Sci U S A 103 (26), 9820-9825 (2006)
   PUBMED   16777960
REFERENCE   2  (residues 1 to 176)
  AUTHORS   Maeda,S., Price,G.D., Badger,M.R., Enomoto,C. and Omata,T.
  TITLE     Bicarbonate binding activity of the CmpA protein of the
            cyanobacterium Synechococcus sp. strain PCC 7942 involved in active
            transport of bicarbonate
  JOURNAL   J Biol Chem 275 (27), 20551-20555 (2000)
   PUBMED   10779519
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13379.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Kingella bonacorsii"
                     /db_xref="taxon:2796361"
     Protein         1..176
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=19164
     Region          37..>161
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mytrrdfmkl salftasaal pllqacgkna amrpdaplai gylpivdaap llvaygkglf
       61 aqhdikaqkp vlfrswaglv eaflsgqvnl ihvlspmsvw mrygsrapvh almwnhvcgs
      121 altvrpdvna ladlqgqtva ipfwysihni ivqqmlrqag lavvektrrr grcgsp
//
LOCUS       WP_235965302              87 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3144 domain-containing protein [Sediminihaliea albiluteola].
ACCESSION   WP_235965302
VERSION     WP_235965302.1
KEYWORDS    RefSeq.
SOURCE      Sediminihaliea albiluteola
  ORGANISM  Sediminihaliea albiluteola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cellvibrionales; Halieaceae; Sediminihaliea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022786.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11342.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Sediminihaliea albiluteola"
                     /db_xref="taxon:2758564"
     Protein         1..87
                     /product="DUF3144 domain-containing protein"
                     /calculated_mol_wt=9465
     Region          18..75
                     /region_name="DUF3144"
                     /note="Protein of unknown function (DUF3144); pfam11342"
                     /db_xref="CDD:431828"
ORIGIN      
        1 msdqqseqeq hqqcmqrfid vantlknegv strvisaalm tasgvyttyt vagnagglne
       61 sgvekvteay rqslqniqra kreeqgq
//
LOCUS       WP_235965500             152 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2213 domain-containing protein [Kingella bonacorsii].
ACCESSION   WP_235965500
VERSION     WP_235965500.1
KEYWORDS    RefSeq.
SOURCE      Kingella bonacorsii
  ORGANISM  Kingella bonacorsii
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Kingella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021494.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09979.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Kingella bonacorsii"
                     /db_xref="taxon:2796361"
     Protein         1..152
                     /product="DUF2213 domain-containing protein"
                     /calculated_mol_wt=16978
     Region          33..>152
                     /region_name="DUF2213"
                     /note="Uncharacterized protein conserved in bacteria
                     (DUF2213); pfam09979"
                     /db_xref="CDD:430961"
ORIGIN      
        1 mdyldetyam dcdnprwyrk qpqlaqdrsl rsydqdgrlh vessniskat vnpyygseip
       61 nyqqlglepk kvyyllrdpe elekaaptfn nlpllskhip vsadepqkev iagttgsdtv
      121 fedgylkcsl avwdaeaiag iesgeqvels sa
//
LOCUS       WP_235965507             169 aa            linear   ENV 02-MAR-2025
DEFINITION  integrase core domain-containing protein [uncultured Kingella sp.].
ACCESSION   WP_235965507
VERSION     WP_235965507.1
KEYWORDS    ENV; RefSeq.
SOURCE      uncultured Kingella sp.
  ORGANISM  uncultured Kingella sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Kingella; environmental samples.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025063.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13683.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="uncultured Kingella sp."
                     /db_xref="taxon:159270"
                     /environmental_sample
     Protein         1..169
                     /product="integrase core domain-containing protein"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=18870
     Region          <60..160
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 maglhagegk rkligtplps qprhhlprtl kpqgagcsnp kpvptivsnk fltehlidpc
       61 pyliecvysd ngteykgsan hafgvacyen gigqkftrva rpqtngkaer virtlmemwh
      121 ekqsfdspeh rqkelccfvn fyntvkshrs lngdtpfevl qayfsqpvm
//
LOCUS       WP_235965534             888 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Micromonospora rubida].
ACCESSION   WP_235965534
VERSION     WP_235965534.1
KEYWORDS    RefSeq.
SOURCE      Micromonospora rubida
  ORGANISM  Micromonospora rubida
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13191.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Micromonospora rubida"
                     /db_xref="taxon:2697657"
     Protein         1..888
                     /product="AAA family ATPase"
                     /calculated_mol_wt=94318
     Region          20..>571
                     /region_name="COG3899"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443106"
     Region          26..197
                     /region_name="CHD"
                     /note="cyclase homology domain; cd07302"
                     /db_xref="CDD:143636"
     Site            order(31,33..38,73,75..77,80,143..145,149..150,153..154,
                     189)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(33,77)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(38,50,53..54,57,61,73..74,130,133,144..147,150,189)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     Region          651..>861
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
ORIGIN      
        1 mlmstivtea hvtapadwpv peerrtvsvl fadivgstal vdrldpeevr alqrayfdtv
       61 agvlarwggv vekyvgdavm alfgaresdg fdayravrag leiqraldgr tlpgapalrt
      121 rvgvatgeal vdvaalrdga hgtasgavit aaarlqehap pgavvvcaat rratatliah
      181 ralppltvag kplpmdvsia agvarpepag hhgrlvgrrr hlahardqvl ravrensprw
      241 vslvgpagsg rsrmlhelrr avdasdgtpv rwyvvacppf perpvepvad llrafadvra
      301 edppatvrrr llaatdglvp pvralstava leglldgsfp agavvwqrll lsqaavqplv
      361 vavddldraa pavtrflrgl iaaavvrrlp lavvtthrpe wadtrpgpdd rrdevplppl
      421 sqvetgrllr qllaragqpt alatrllplv gglpgtaeay arripegadp aaalpdrvra
      481 satarldacd gteraatmvv aalgpsapat tvdqaigwap graepvlrrl agrgllrrta
      541 rdgyrvadpa lrrvahdrlp rsvrteiarr vdlgtpvgpr latlpisaal rhptlpisaa
      601 lthpadlarq agatlghpar stdttlgypt gaplprrggg gppmgtgrsp aarrgltala
      661 ghavaarptp agsardmprp tptgpsegpr ptiavppdtg repcgsrspv lphpttacra
      721 alprrpagrr gksgagreta grpdpgptar pgptadgrrs saypsgqrrh ptgrsgqwar
      781 wtrwtrqgas aepgpgrptg rrraarrpth rqsrrwhrql psarrppgaq parrrrrlpg
      841 caparrpapg qagrrqagrr psgrwrferr arrraerwtg pwrsgrra
//
LOCUS       WP_235965722            1121 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase [Micromonospora rubida].
ACCESSION   WP_235965722
VERSION     WP_235965722.1
KEYWORDS    RefSeq.
SOURCE      Micromonospora rubida
  ORGANISM  Micromonospora rubida
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1121
                     /organism="Micromonospora rubida"
                     /db_xref="taxon:2697657"
     Protein         1..1121
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=116385
     Region          232..480
                     /region_name="Peptidases_S8_S53"
                     /note="Peptidase domain in the S8 and S53 families;
                     cl10459"
                     /db_xref="CDD:415849"
     Site            order(271,335,446)
                     /site_type="active"
                     /db_xref="CDD:173787"
     Site            order(271,446)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:173787"
     Region          522..>582
                     /region_name="DUF1735"
                     /note="Domain of unknown function (DUF1735); pfam08522"
                     /db_xref="CDD:430052"
     Region          <1061..1113
                     /region_name="SO_family_Moco"
                     /note="Sulfite oxidase (SO) family, molybdopterin binding
                     domain. This molybdopterin cofactor (Moco) binding domain
                     is found in a variety of oxidoreductases, main members of
                     this family are nitrate reductase (NR) and sulfite oxidase
                     (SO). SO catalyzes the...; cl00199"
                     /db_xref="CDD:469652"
ORIGIN      
        1 mhragrksag lalalglvla aplttpagaa patspasatp agaepagrta grpattvtlv
       61 tgdrvtvaas gavsvrpgag radlrflvqr drgrvtvlpq dalpllrsgk vdrrlfdvtg
      121 lieagyddah rnslpllvsy rsgearrava giagtrvtrd lpaiggaavt aekaragavw
      181 gamtsgrasa rvdtaegvdr lwldgrrkvt ldhsvpqiga paahaagltg rgvtvavldt
      241 gvdpehpdfa grlaeshnfs eapepgdtvg hgthvasiia gsgaasggky rgvapdatll
      301 sgkvcestsc adsailagmq waaaekhatv vnlslggmdt pevdpleqav qtltaqtgtl
      361 fviaagndgs dgsvgspasa daalavgavd rddeladfss rgprvgddgl kpditapgve
      421 ivaaraagsd lgdpvgekym tlsgtsmatp hvagsaalla qrhpdwraga lkstlmasak
      481 phpgqtayqq gagrvdvara igqqvtsdpa svsfgraewp hgddptiart vnwrnsgstp
      541 vtldltveat gpdgdpapag lfqlgasqvt vpaggqaqat vtadtrvqga dgyytgrvva
      601 rsgatvavtp iavhrevesy evtiahvgrd gqpiseygtt lvglnsfnfv dvydadgtat
      661 vrvpkgrygl asylfatdan gepagatvla rpemivdral rltldartak pvlntvpqrg
      721 atprlvdvst vffgadqsiy gfslwsdgfe gltsgqvgpa stperfvati gsqwaeqgaa
      781 sspylyalle afpgrmptgf vkhyrsrdla tvvhtfrday pgleaermvl geleyntggs
      841 avvlptatpg rrvehystnh vrweselnfg tpspegwldt qavlrtppta yragrtshet
      901 wgeapfapsf pvrrwghegi trtgdtivad lpvhsdaggh aggslndtew trlyrggklv
      961 geseypgyge fevpagaany rletsakrgf tdlstevtsa wtfrskhvpg dgfaslqama
     1021 vrfapalrvd nsapagrsft vpvrverqdg apaakvaklt vdasydggkt wrkaelrrqg
     1081 sgwtatlthp agtghvslra takdtagntv ttriiqayrl r
//
LOCUS       WP_235965726             146 aa            linear   BCT 02-MAR-2025
DEFINITION  nitrite reductase (NAD(P)H) small subunit [Micromonospora rubida].
ACCESSION   WP_235965726
VERSION     WP_235965726.1
KEYWORDS    RefSeq.
SOURCE      Micromonospora rubida
  ORGANISM  Micromonospora rubida
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025178.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13806.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Micromonospora rubida"
                     /db_xref="taxon:2697657"
     Protein         1..146
                     /product="nitrite reductase (NAD(P)H) small subunit"
                     /GO_function="GO:0008942 - nitrite reductase [NAD(P)H]
                     activity [Evidence IEA]"
                     /calculated_mol_wt=15597
     Region          21..>98
                     /region_name="YjgC"
                     /note="Predicted molibdopterin-dependent oxidoreductase
                     YjgC [General function prediction only]; COG3383"
                     /db_xref="CDD:442610"
     Region          <79..141
                     /region_name="Rieske"
                     /note="Rieske domain; a [2Fe-2S] cluster binding domain
                     commonly found in Rieske non-heme iron oxygenase (RO)
                     systems such as naphthalene and biphenyl dioxygenases, as
                     well as in plant/cyanobacterial chloroplast b6f and
                     mitochondrial cytochrome bc(1) complexes; cl00938"
                     /db_xref="CDD:445190"
ORIGIN      
        1 mtdgerpatr pgsrareaap hcphfalqcg mslretagrg egglrregrt vaelldrpgr
       61 lttplkrdav tgelrpagwd eadgayarar rtlagpggap tvasplhrra yelrtgacld
      121 lpgvsvarhd grcrdvlvea rlrreg
//
LOCUS       WP_235965736              77 aa            linear   BCT 02-MAR-2025
DEFINITION  GntR family transcriptional regulator [Micromonospora rubida].
ACCESSION   WP_235965736
VERSION     WP_235965736.1
KEYWORDS    RefSeq.
SOURCE      Micromonospora rubida
  ORGANISM  Micromonospora rubida
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1  (residues 1 to 77)
  AUTHORS   Hillerich,B. and Westpheling,J.
  TITLE     A new GntR family transcriptional regulator in streptomyces
            coelicolor is required for morphogenesis and antibiotic production
            and controls transcription of an ABC transporter in response to
            carbon source
  JOURNAL   J Bacteriol 188 (21), 7477-7487 (2006)
   PUBMED   16936034
REFERENCE   2  (residues 1 to 77)
  AUTHORS   Rigali,S., Nothaft,H., Noens,E.E., Schlicht,M., Colson,S.,
            Muller,M., Joris,B., Koerten,H.K., Hopwood,D.A., Titgemeyer,F. and
            van Wezel,G.P.
  TITLE     The sugar phosphotransferase system of Streptomyces coelicolor is
            regulated by the GntR-family regulator DasR and links
            N-acetylglucosamine metabolism to the control of development
  JOURNAL   Mol Microbiol 61 (5), 1237-1251 (2006)
   PUBMED   16925557
REFERENCE   3  (residues 1 to 77)
  AUTHORS   Gorelik,M., Lunin,V.V., Skarina,T. and Savchenko,A.
  TITLE     Structural characterization of GntR/HutC family signaling domain
  JOURNAL   Protein Sci 15 (6), 1506-1511 (2006)
   PUBMED   16672238
REFERENCE   4  (residues 1 to 77)
  AUTHORS   Rigali,S., Schlicht,M., Hoskisson,P., Nothaft,H., Merzbacher,M.,
            Joris,B. and Titgemeyer,F.
  TITLE     Extending the classification of bacterial transcription factors
            beyond the helix-turn-helix motif as an alternative approach to
            discover new cis/trans relationships
  JOURNAL   Nucleic Acids Res 32 (11), 3418-3426 (2004)
   PUBMED   15247334
  REMARK    Publication Status: Online-Only
REFERENCE   5  (residues 1 to 77)
  AUTHORS   Lee,M.H., Scherer,M., Rigali,S. and Golden,J.W.
  TITLE     PlmA, a new member of the GntR family, has plasmid maintenance
            functions in Anabaena sp. strain PCC 7120
  JOURNAL   J Bacteriol 185 (15), 4315-4325 (2003)
   PUBMED   12867439
REFERENCE   6  (residues 1 to 77)
  AUTHORS   Rigali,S., Derouaux,A., Giannotta,F. and Dusart,J.
  TITLE     Subdivision of the helix-turn-helix GntR family of bacterial
            regulators in the FadR, HutC, MocR, and YtrA subfamilies
  JOURNAL   J Biol Chem 277 (15), 12507-12515 (2002)
   PUBMED   11756427
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012610.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00392.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Micromonospora rubida"
                     /db_xref="taxon:2697657"
     Protein         1..77
                     /product="GntR family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=8000
     Region          1..>48
                     /region_name="MngR"
                     /note="DNA-binding transcriptional regulator, GntR family
                     [Transcription]; COG2188"
                     /db_xref="CDD:441791"
ORIGIN      
        1 mspvpryrql aailrkaiev gecppgsrlp sektltqtyg varetaskam dalaadalav
       61 mvpgvgwhvp pevtges
//
LOCUS       WP_235965786             489 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: helix-turn-helix domain-containing protein
            [Herbidospora].
ACCESSION   WP_235965786
VERSION     WP_235965786.1
KEYWORDS    RefSeq.
SOURCE      Herbidospora
  ORGANISM  Herbidospora
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024949.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13560.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Herbidospora"
                     /db_xref="taxon:28443"
     Protein         1..489
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=54409
     Region          36..409
                     /region_name="COG3800"
                     /note="Predicted transcriptional regulator [General
                     function prediction only]"
                     /db_xref="CDD:443013"
ORIGIN      
        1 mpsvlgeepl sltqeidlla fgqrlkhlrr qrgltlsdlg ervgrapsql sllengkrep
       61 klsllkalaa algvpveell rrqapnrraq leialeeaqr dplytslglg klkvsarvpn
      121 dvlehllgly delkarqakg tatpeearaa naelrqkqke agnyfqeies aaaeallsvg
      181 yrtgalsqst iqalvahygf tvhtapdlpr sarsvtdlrn hriylkreql gmhtprtill
      241 qtighialgh hkprdfadfl rqrveanyfa aavlvpeaaa apylleakrd ralsvedlrd
      301 vfavsyemaa hrftnlathh ldlvchfvrn daggiiykay endgiifpad eqgaiegqrl
      361 cqqwsgrqvf rspdrysvyh qysdgptgth fcvahvdpsh ekdfaitlgv pfresrwfrg
      421 rettrrtksn cpngeccrrp paelaqrweg yafpsarans hvlaalppgs fpgvdeadvy
      481 aflerhaad
//
LOCUS       WP_235965308             228 aa            linear   BCT 02-MAR-2025
DEFINITION  tripartite tricarboxylate transporter substrate-binding protein
            [Caenimonas soli].
ACCESSION   WP_235965308
VERSION     WP_235965308.1
KEYWORDS    RefSeq.
SOURCE      Caenimonas soli
  ORGANISM  Caenimonas soli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Caenimonas.
REFERENCE   1  (residues 1 to 228)
  AUTHORS   Winnen,B., Hvorup,R.N. and Saier,M.H. Jr.
  TITLE     The tripartite tricarboxylate transporter (TTT) family
  JOURNAL   Res Microbiol 154 (7), 457-465 (2003)
   PUBMED   14499931
REFERENCE   2  (residues 1 to 228)
  AUTHORS   Antoine,R., Jacob-Dubuisson,F., Drobecq,H., Willery,E., Lesjean,S.
            and Locht,C.
  TITLE     Overrepresentation of a gene family encoding extracytoplasmic
            solute receptors in Bordetella
  JOURNAL   J Bacteriol 185 (4), 1470-1474 (2003)
   PUBMED   12562821
REFERENCE   3  (residues 1 to 228)
  AUTHORS   Sweet,G.D., Kay,C.M. and Kay,W.W.
  TITLE     Tricarboxylate-binding proteins of Salmonella typhimurium.
            Purification, crystallization, and physical properties
  JOURNAL   J Biol Chem 259 (3), 1586-1592 (1984)
   PUBMED   6141166
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015366.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03401.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Caenimonas soli"
                     /db_xref="taxon:2735555"
     Protein         1..228
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /calculated_mol_wt=23784
     Region          <15..220
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mvmspassca asrspttdll avtkmttspl vlavnpatgi rtvpeliaaa kkdpgklnys
       61 tsgngsaphl gaalftmltg aqlthvpyrg galavqsvma ndtqltfgts psvlpqaasg
      121 rlrpiavstr ersplvpdlp gmkeaglpey niefwygmfl pagtppaivk kvydatvsam
      181 qqpsvkaala regtevsisg speqfdkfla edgkfwvnlv inanvkve
//
LOCUS       WP_235966128             391 aa            linear   BCT 02-MAR-2025
DEFINITION  bis-aminopropyl spermidine synthase family protein [Herbidospora
            solisilvae].
ACCESSION   WP_235966128
VERSION     WP_235966128.1
KEYWORDS    RefSeq.
SOURCE      Herbidospora solisilvae
  ORGANISM  Herbidospora solisilvae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Herbidospora.
REFERENCE   1  (residues 1 to 391)
  AUTHORS   Okada,K., Hidese,R., Fukuda,W., Niitsu,M., Takao,K., Horai,Y.,
            Umezawa,N., Higuchi,T., Oshima,T., Yoshikawa,Y., Imanaka,T. and
            Fujiwara,S.
  TITLE     Identification of a novel aminopropyltransferase involved in the
            synthesis of branched-chain polyamines in hyperthermophiles
  JOURNAL   J Bacteriol 196 (10), 1866-1876 (2014)
   PUBMED   24610711
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013978.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01861.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Herbidospora solisilvae"
                     /db_xref="taxon:2696284"
     Protein         1..391
                     /product="bis-aminopropyl spermidine synthase family
                     protein"
                     /calculated_mol_wt=41814
     Region          <3..230
                     /region_name="BpsA"
                     /note="Aminopropyltransferase BpsA,
                     N(4)-bis(aminopropyl)spermidine biosynthesis [Secondary
                     metabolites biosynthesis, transport and catabolism];
                     COG1568"
                     /db_xref="CDD:441176"
ORIGIN      
        1 mvdpsvverm agiiaraprg rsaldhvsat petvvrrall lgarfwlpgs rllcvgdhdl
       61 tslavrlihp eaevmvvdid drilayideq dlgvttrwad lrlglppsar gwgdlaitdp
      121 pytpagvglf vargleglrd rdegrvllay gasertpmla lkvqhaladl qllneaiypd
      181 fnrydgaeai gsaadlyvlr pttkswpava srvdrlatai ytqgpqaves akaappelgd
      241 yapdllvgdw prdllpgvpr vrlstwlakp yaaqvsrvai hapgleaalp rlvlaardae
      301 vrvfgttspv rlppapdait rrilagshgk vanawreglv aelgltknqa raripawaga
      361 talelpmhrl tglaaavars legedpglde a
//
LOCUS       WP_235966163             185 aa            linear   BCT 02-MAR-2025
DEFINITION  neutral zinc metallopeptidase [Herbidospora solisilvae].
ACCESSION   WP_235966163
VERSION     WP_235966163.1
KEYWORDS    RefSeq.
SOURCE      Herbidospora solisilvae
  ORGANISM  Herbidospora solisilvae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Herbidospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016143.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04228.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Herbidospora solisilvae"
                     /db_xref="taxon:2696284"
     Protein         1..185
                     /product="neutral zinc metallopeptidase"
                     /calculated_mol_wt=20189
     Region          <1..176
                     /region_name="Zn_peptidase"
                     /note="Putative neutral zinc metallopeptidase; cl19825"
                     /db_xref="CDD:473215"
ORIGIN      
        1 mttainvtna ywarnwtsff tgtyqppkvf gsfrrgvrqp pacggsrtgf gnafyclpgd
       61 fiawdfdlma ggyrsgdawv ylviahewgh avqariqrsl vpraqelqad cfagavlfga
      121 aaqktllfed gdvaelraal rrmgdrtpwt dvgdhgsaeq risfftrgae ggvraclpta
      181 srlsr
//
LOCUS       WP_235966181             370 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA glycosylase AlkZ-like family protein [Herbidospora solisilvae].
ACCESSION   WP_235966181
VERSION     WP_235966181.1
KEYWORDS    RefSeq.
SOURCE      Herbidospora solisilvae
  ORGANISM  Herbidospora solisilvae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Herbidospora.
REFERENCE   1  (residues 1 to 370)
  AUTHORS   Bradley,N.P., Washburn,L.A., Christov,P.P., Watanabe,C.M.H. and
            Eichman,B.F.
  TITLE     Escherichia coli YcaQ is a DNA glycosylase that unhooks DNA
            interstrand crosslinks
  JOURNAL   Nucleic Acids Res 48 (13), 7005-7017 (2020)
   PUBMED   32409837
REFERENCE   2  (residues 1 to 370)
  AUTHORS   Mullins,E.A., Warren,G.M., Bradley,N.P. and Eichman,B.F.
  TITLE     Structure of a DNA glycosylase that unhooks interstrand cross-links
  JOURNAL   Proc Natl Acad Sci U S A 114 (17), 4400-4405 (2017)
   PUBMED   28396405
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017984.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06224.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Herbidospora solisilvae"
                     /db_xref="taxon:2696284"
     Protein         1..370
                     /product="DNA glycosylase AlkZ-like family protein"
                     /GO_function="GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA]"
                     /GO_process="GO:0036297 - interstrand cross-link repair
                     [Evidence IEA]"
                     /calculated_mol_wt=39337
     Region          30..346
                     /region_name="HTH_42"
                     /note="Winged helix DNA-binding domain; cl19833"
                     /db_xref="CDD:473220"
ORIGIN      
        1 mdltwpqvla wrlgrqfvts pgpgvvavae rlcgvqaqva ssaelaislr lgrpagpeie
       61 qalwtdqtli ktwsirgtlh llptaswpvy ravlgtlryw dkpswhrgsg vsageldaii
      121 gavpqalagg pltreelvda vimvtgdehl reklasgwgq lfkplsflge lchgvprggk
      181 vtftvpprvg etspeeggve llraflgahg pasmaafdgw lfrgltrrav lrqwfadlap
      241 atitvegeel fvlpehvddl kaarpseetf llagfdqyvm gaprdlepll paaakaavsr
      301 tagwispvvv hggrvvgtwd ardgvltatm leeapgveka aekvvavwgr pfdvvvsrpg
      361 aagngagrpa
//
LOCUS       WP_235966203             349 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Herbidospora solisilvae].
ACCESSION   WP_235966203
VERSION     WP_235966203.1
KEYWORDS    RefSeq.
SOURCE      Herbidospora solisilvae
  ORGANISM  Herbidospora solisilvae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Herbidospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Herbidospora solisilvae"
                     /db_xref="taxon:2696284"
     Protein         1..349
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=37898
     Region          57..323
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mgerirvmrv itgldtgwpa lqavtlldhl dpgrfeqrly tttmherart ipddgprala
       61 rlvaemrrfr pdivhthtgr agalgrtaat marvparvht fdvhprrtvi errlariser
      121 lvadcalvrd dllaagigtp rqyavvrpgv rmaprpdrev ararlglpad vpvvafvgkv
      181 trnrrpdrfl dtvalvlrgl pmtkvlvcgg gdlaadlrak avrfgdavaw lsrrtdleii
      241 haaadvmllt sdyegipldl lkaaasgvpa vatrvggvpe vvedrvtgll tdpdpgllaa
      301 svvrilrdpg yagrlgdaaa qraglyfgqs rfvdevsaly vrlheegra
//
LOCUS       WP_235966263             302 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Micromonospora rubida].
ACCESSION   WP_235966263
VERSION     WP_235966263.1
KEYWORDS    RefSeq.
SOURCE      Micromonospora rubida
  ORGANISM  Micromonospora rubida
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Micromonospora rubida"
                     /db_xref="taxon:2697657"
     Protein         1..302
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=32351
     Region          1..295
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mdgllelghd vfllgapgtt pvspavtvvd ageiedmhaw lnspeasvid ivhdfscgqi
       61 dpdrlprgma ylsthhltgk pkyprncvya syaqraqaen dvapvvrisv nqarypfqad
      121 kddyllylgr isewkgtyea aafasaagrr lvvagpswee dylarimrdf gdsvdlvgev
      181 ggerrldlis ratamvvlsq stmgpwgvvw cepgstvvse aaacgtpvig tpngclaeiv
      241 pavgtvvpeg saftaeqars vvaalpdpds vraaalkqwd yvvvakefet iyhdvlagrt
      301 wt
//
LOCUS       WP_235966688             146 aa            linear   BCT 02-MAR-2025
DEFINITION  SRPBCC family protein [Herbidospora solisilvae].
ACCESSION   WP_235966688
VERSION     WP_235966688.1
KEYWORDS    RefSeq.
SOURCE      Herbidospora solisilvae
  ORGANISM  Herbidospora solisilvae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Herbidospora.
REFERENCE   1  (residues 1 to 146)
  AUTHORS   Iyer,L.M., Koonin,E.V. and Aravind,L.
  TITLE     Adaptations of the helix-grip fold for ligand binding and catalysis
            in the START domain superfamily
  JOURNAL   Proteins 43 (2), 134-144 (2001)
   PUBMED   11276083
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10604.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Herbidospora solisilvae"
                     /db_xref="taxon:2696284"
     Protein         1..146
                     /product="SRPBCC family protein"
                     /calculated_mol_wt=16340
     Region          18..146
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(19,28..30,32..33,46,57,59,61,70,72,74,81,83,94..95,
                     97,99,109,111,113,115,127,128..129,131..132,135..137,140)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176871"
ORIGIN      
        1 mrdlqsfeer apvrntsste idatpaevwa llsdlrgwqr wwpehrvlel getapgerfr
       61 wrlggvriss rfavvtegre ltwsgvalgl yravdrnlve plpggrtrlt iseslagpla
      121 gllypaaklr agherflhai kkeaek
//
LOCUS       WP_235966704             115 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Herbidospora solisilvae].
ACCESSION   WP_235966704
VERSION     WP_235966704.1
KEYWORDS    RefSeq.
SOURCE      Herbidospora solisilvae
  ORGANISM  Herbidospora solisilvae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Herbidospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Herbidospora solisilvae"
                     /db_xref="taxon:2696284"
     Protein         1..115
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=12880
     Region          24..111
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(25..27,41,57..59)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133394"
ORIGIN      
        1 msaeppggyp vglsamddef apmfsvgqva smlevqqafl rridqqqvvs pqrsaggqrr
       61 ysrhdigqir qvvvlmgegm tlaairriie lefevirlrr erdellarlr elgve
//
LOCUS       WP_235966711             445 aa            linear   BCT 02-MAR-2025
DEFINITION  carbohydrate-binding protein [Micromonospora rubida].
ACCESSION   WP_235966711
VERSION     WP_235966711.1
KEYWORDS    RefSeq.
SOURCE      Micromonospora rubida
  ORGANISM  Micromonospora rubida
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1  (residues 1 to 445)
  AUTHORS   Hirano,T., Sugiyama,K., Sakaki,Y., Hakamata,W., Park,S.Y. and
            Nishio,T.
  TITLE     Structure-based analysis of domain function of chitin
            oligosaccharide deacetylase from Vibrio parahaemolyticus
  JOURNAL   FEBS Lett 589 (1), 145-151 (2015)
   PUBMED   25479092
REFERENCE   2  (residues 1 to 445)
  AUTHORS   Mine,S., Nakamura,T., Sato,T., Ikegami,T. and Uegaki,K.
  TITLE     Solution structure of the chitin-binding domain 1 (ChBD1) of a
            hyperthermophilic chitinase from Pyrococcus furiosus
  JOURNAL   J Biochem 155 (2), 115-122 (2014)
   PUBMED   24272751
REFERENCE   3  (residues 1 to 445)
  AUTHORS   Kezuka,Y., Ohishi,M., Itoh,Y., Watanabe,J., Mitsutomi,M.,
            Watanabe,T. and Nonaka,T.
  TITLE     Structural studies of a two-domain chitinase from Streptomyces
            griseus HUT6037
  JOURNAL   J Mol Biol 358 (2), 472-484 (2006)
   PUBMED   16516924
REFERENCE   4  (residues 1 to 445)
  AUTHORS   Akagi,K., Watanabe,J., Hara,M., Kezuka,Y., Chikaishi,E.,
            Yamaguchi,T., Akutsu,H., Nonaka,T., Watanabe,T. and Ikegami,T.
  TITLE     Identification of the substrate interaction region of the
            chitin-binding domain of Streptomyces griseus chitinase C
  JOURNAL   J Biochem 139 (3), 483-493 (2006)
   PUBMED   16567413
REFERENCE   5  (residues 1 to 445)
  AUTHORS   Ikegami,T., Okada,T., Hashimoto,M., Seino,S., Watanabe,T. and
            Shirakawa,M.
  TITLE     Solution structure of the chitin-binding domain of Bacillus
            circulans WL-12 chitinase A1
  JOURNAL   J Biol Chem 275 (18), 13654-13661 (2000)
   PUBMED   10788483
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014853.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02839.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Micromonospora rubida"
                     /db_xref="taxon:2697657"
     Protein         1..445
                     /product="carbohydrate-binding protein"
                     /GO_component="GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_function="GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=44628
     Region          <28..146
                     /region_name="Herpes_UL21"
                     /note="Herpesvirus UL21; cl28056"
                     /db_xref="CDD:332877"
     Region          134..>171
                     /region_name="Pro_Al_protease"
                     /note="Alpha-lytic protease prodomain; pfam02983"
                     /db_xref="CDD:460772"
     Region          203..376
                     /region_name="alphaLP-like"
                     /note="alpha-lytic protease (alpha-LP), a bacterial serine
                     protease of the chymotrypsin family, and similar proteins;
                     cd21112"
                     /db_xref="CDD:411050"
     Site            order(231,251,285,288..292,294,302..306,309,313..316,318,
                     326,331..336,351..353,359,362)
                     /site_type="other"
                     /note="pro domain interface [polypeptide binding]"
                     /db_xref="CDD:411050"
     Site            order(231,314,316,318,331..336,351..353)
                     /site_type="other"
                     /note="peptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:411050"
     Region          401..445
                     /region_name="ChiA1_BD"
                     /note="chitin-binding domain of Chi A1-like proteins;
                     cd12214"
                     /db_xref="CDD:213177"
ORIGIN      
        1 mrrrpatmaa allgaaatvl tftltaqadp gadpapggps gvaapdglap emfaalqrdl
       61 rltpaqarar ldtdaragrv qqvlratlgs ryggawvtpd gtavtvgvtt aadaatvrdl
      121 gavparvrhg eqalaavvdr ldrragdapd gvtgwyadlp tnsvvvlarp ggdaaaeafa
      181 vgapagtvrv qattedprpy adviggnayy igssrcsigf svqggfvtag hcgrvgarts
      241 qpggtfrgst fpgrdyawvq vdagntprgl vntysggtva vagsteaavg aavcrsgstt
      301 gwrcgtiqqk nasvtypegt vsgltrsnac aepgdsggsw lagsqaqgvt sggsgnctsg
      361 gtmyfqpvnp ilaayglsli tsgggptptp tgtsnppgdt twqagtsyaa gatviyagqs
      421 yrclqghtaq vgweppnvpa lwqqv
//
LOCUS       WP_235967211            1124 aa            linear   BCT 02-MAR-2025
DEFINITION  BTAD domain-containing putative transcriptional regulator
            [Micromonospora rubida].
ACCESSION   WP_235967211
VERSION     WP_235967211.1
KEYWORDS    RefSeq.
SOURCE      Micromonospora rubida
  ORGANISM  Micromonospora rubida
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1  (residues 1 to 1124)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015649.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03704.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1124
                     /organism="Micromonospora rubida"
                     /db_xref="taxon:2697657"
     Protein         1..1124
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /calculated_mol_wt=119761
     Region          1..65
                     /region_name="aMBF1"
                     /note="Archaeal ribosome-binding protein aMBF1, putative
                     translation factor, contains Zn-ribbon and HTH domains
                     [Translation, ribosomal structure and biogenesis];
                     COG1813"
                     /db_xref="CDD:441418"
     Region          98..337
                     /region_name="DnrI"
                     /note="DNA-binding transcriptional regulator
                     DnrI/AfsR/EmbR, SARP family, contains BTAD domain
                     [Transcription]; COG3629"
                     /db_xref="CDD:442847"
     Region          203..1124
                     /region_name="COG3903"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443109"
     Region          797..822
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          834..862
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(835,838..839,842..843,845,876,879..880,883..884,
                     886..887,913,916,920,923..924,927)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          874..904
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          912..943
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 magqgsgdas epvsaqlrrl reqlgltqrd lavsanvsia airdleqgrt rvpraatlha
       61 larylsaaga ddaamlmqva paarsrrahp pppagarplt vavlgplilr rggielrlgs
      121 arhrcllarl alaggevvgr delmgllwge drppsalnll hsyvgrlrrl wgaegagvlv
      181 aagsgyrlal dadhldllrf relaeaghta ddparalgql laaarlwrge tdveqlrgtp
      241 lvaalfeqya tllcqaaalg rqlgeqeqvl pllrelaerl elyeplhael imaaaasgrq
      301 aealaaydrv rralieqlgv dpgpqlryay eavlrqqwpp avtpsprgtp irqvpagpsd
      361 fvgrereldr igaalarsgp asmrvvlisg sagvgktala ltlahrlrge ypdgqlyadl
      421 rsgtsgpatp mevlgrflra lgvpagrigp deeeasallr saladrrmll vldnardaaq
      481 vrallpgpgg sdalvtsrrr lpdlspwliv dlatlsaada vrlmdstvga grvsadpesa
      541 relaaacgql plalriaagr lasrpawtta elahrlrden hrltqlsagd tsvlasfqls
      601 yqdlsesvrr afrlcalhpg ddfgveatae llgvgqvead lvlgelldan mllqytaerf
      661 rfhdllglya arllgeedpv dadaarnrlh swslrtatea vellnpgmvr lvassgggpf
      721 adqeaalrwl daeagallal veraadgarp qlswlladql rgyflirrhv drwlrtaeag
      781 lraataaadr agraamllsr gqamwalgrh aqaladyrag erlsqgsdwp aaapylwhni
      841 gvvraeqgrl deaergyrea lrlcgdrtel aavralalng lgamyadqgq laeaaeclrd
      901 alrinaaagr tasvlstrgn lgmvlrqlgq eraaekhlta alagyrrrsn mhgelstlde
      961 lsqlhaqrgd aaralsaaqq gydlavivrd qraqaallct lgearraggd pagalrflrq
     1021 aldmarqngy pyfaaraqvg lavvhlglga hglargcaae arelatthdf rmveadalaa
     1081 larclaatda deapatveaa vaayraagaq vladrlrdll aagr
//
LOCUS       WP_235967240              83 aa            linear   BCT 02-MAR-2025
DEFINITION  type II toxin-antitoxin system RelE/ParE family toxin [Herbidospora
            solisilvae].
ACCESSION   WP_235967240
VERSION     WP_235967240.1
KEYWORDS    RefSeq.
SOURCE      Herbidospora solisilvae
  ORGANISM  Herbidospora solisilvae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Herbidospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05973.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Herbidospora solisilvae"
                     /db_xref="taxon:2696284"
     Protein         1..83
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /calculated_mol_wt=9295
     Region          1..>58
                     /region_name="COG4683"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:443719"
ORIGIN      
        1 mawgevelep evddwldsls qddqetavfy vdllaergvl lgepytrqlh gklrelrfhl
       61 srercgsptg shgvqetada rgr
//
LOCUS       WP_235967375             416 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Micromonospora rubida].
ACCESSION   WP_235967375
VERSION     WP_235967375.1
KEYWORDS    RefSeq.
SOURCE      Micromonospora rubida
  ORGANISM  Micromonospora rubida
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Micromonospora rubida"
                     /db_xref="taxon:2697657"
     Protein         1..416
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=42581
     Region          23..394
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(30..31,34..35,38,71,121..122,124..126,129,149,
                     152..153,156,225,228..229,232..234,237,265,269,326..327,
                     331,335,351,354..355,358..359,362)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 masaspspaa ltavphrrpa ttllgaqlvt avgdgcfyvi fvvylvqvgh lrpaqvggll
       61 tvawgagfll typvgalgdr iglrrvtill saataaallt lasaptpwlv ssacvayaia
      121 qsgagatrqa mlvslvpste lvtvragiqt avnagiglga tagglallag tptvyraalv
      181 gdaalfavsa imltrlppaa rapvrtghgw daprdtryvv vaalnavlyl ympmlsvllp
      241 lyltsrtaap rwivaavfvv ntlgvlgwqr rtarrvttla eatrairlag lalcaacvlf
      301 wtatattdpa vttglllaav avqvagelrl aagswcvgfa ladptrpgqw qgvyssgvpl
      361 aravgpaalt tlvmvwsgpg wlvlglvfla tgltttlava waahrrpfqt ldpgat
//
LOCUS       WP_235967377             107 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4365 domain-containing protein [Herbidospora solisilvae].
ACCESSION   WP_235967377
VERSION     WP_235967377.1
KEYWORDS    RefSeq.
SOURCE      Herbidospora solisilvae
  ORGANISM  Herbidospora solisilvae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Herbidospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025638.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14280.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Herbidospora solisilvae"
                     /db_xref="taxon:2696284"
     Protein         1..107
                     /product="DUF4365 domain-containing protein"
                     /calculated_mol_wt=11977
     Region          <2..101
                     /region_name="DUF4365"
                     /note="Domain of unknown function (DUF4365); pfam14280"
                     /db_xref="CDD:433834"
ORIGIN      
        1 mkcteqdvlk ddgvhwrlsr dhydalrdph tynrkilvvl lvpsrlgewl evsdegmllr
       61 rsaywtcleg gastdtdskt vvlprervft vgqllailqr igdggap
//
LOCUS       WP_235967586             294 aa            linear   BCT 02-MAR-2025
DEFINITION  replication-relaxation family protein [Streptomyces mesophilus].
ACCESSION   WP_235967586
VERSION     WP_235967586.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces mesophilus
  ORGANISM  Streptomyces mesophilus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 294)
  AUTHORS   Zou,X., Caufield,P.W., Li,Y. and Qi,F.
  TITLE     Complete nucleotide sequence and characterization of pUA140, a
            cryptic plasmid from Streptococcus mutans
  JOURNAL   Plasmid 46 (2), 77-85 (2001)
   PUBMED   11591133
  REMARK    Erratum:[Plasmid 2002 May;47(3):251. Zhou X [corrected to Zou X]]
REFERENCE   2  (residues 1 to 294)
  AUTHORS   Nunez,B. and De La Cruz,F.
  TITLE     Two atypical mobilization proteins are involved in plasmid CloDF13
            relaxation
  JOURNAL   Mol Microbiol 39 (4), 1088-1099 (2001)
   PUBMED   11251827
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025186.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13814.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Streptomyces mesophilus"
                     /db_xref="taxon:1775132"
     Protein         1..294
                     /product="replication-relaxation family protein"
                     /calculated_mol_wt=32571
     Region          16..205
                     /region_name="Replic_Relax"
                     /note="Replication-relaxation; cl23910"
                     /db_xref="CDD:451603"
ORIGIN      
        1 mvligvdagd gdrmalavla qyrmatthqm hrilgqpvri eqtrrrlarl rtqgliehit
       61 laqagrtrvw fptayglqla gewpelrgrr paktvtdpta vrlkaahtlt vtetalafle
      121 darrhddlcr pldwipevhh pigngqavip dalmyyrrgt aeksggamlr afievdratm
      181 gperlaakls lynrlhhytp atpahrppaq pgmeswrhqy plfprllfvl dgtgkagven
      241 risalnaaah slgsflslvp vlatsltdli thsptapiwr pihtptqptp rpwa
//
LOCUS       WP_235967803             132 aa            linear   BCT 02-MAR-2025
DEFINITION  M48 family metalloprotease [Streptomyces mesophilus].
ACCESSION   WP_235967803
VERSION     WP_235967803.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces mesophilus
  ORGANISM  Streptomyces mesophilus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 132)
  AUTHORS   Quigley,A., Dong,Y.Y., Pike,A.C., Dong,L., Shrestha,L.,
            Berridge,G., Stansfeld,P.J., Sansom,M.S., Edwards,A.M., Bountra,C.,
            von Delft,F., Bullock,A.N., Burgess-Brown,N.A. and Carpenter,E.P.
  TITLE     The structural basis of ZMPSTE24-dependent laminopathies
  JOURNAL   Science 339 (6127), 1604-1607 (2013)
   PUBMED   23539603
REFERENCE   2  (residues 1 to 132)
  AUTHORS   Pryor,E.E. Jr., Horanyi,P.S., Clark,K.M., Fedoriw,N.,
            Connelly,S.M., Koszelak-Rosenblum,M., Zhu,G., Malkowski,M.G.,
            Wiener,M.C. and Dumont,M.E.
  TITLE     Structure of the integral membrane protein CAAX protease Ste24p
  JOURNAL   Science 339 (6127), 1600-1604 (2013)
   PUBMED   23539602
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013594.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01435.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Streptomyces mesophilus"
                     /db_xref="taxon:1775132"
     Protein         1..132
                     /product="M48 family metalloprotease"
                     /EC_number="3.4.24.-"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=14016
     Region          5..>49
                     /region_name="Peptidase_M48_M56"
                     /note="Peptidases M48 (Ste24 endopeptidase or htpX
                     homolog) and M56 (in MecR1 and BlaR1), integral membrane
                     metallopeptidases; cl28898"
                     /db_xref="CDD:333718"
ORIGIN      
        1 mwteesqdln ayaaaghtvg vsrfalenlp saqlaavlah elghhtggha wsltarllvl
       61 agpqpatvlh tmhgmdqqar hqaalaagkp vaepgghqar rtpshnaegr lprrsgvgal
      121 qfrrtpywly gp
//
LOCUS       WP_235967858             630 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramoyl-L-alanine amidase [Streptomyces mesophilus].
ACCESSION   WP_235967858
VERSION     WP_235967858.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces mesophilus
  ORGANISM  Streptomyces mesophilus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 630)
  AUTHORS   Cheng,X., Zhang,X., Pflugrath,J.W. and Studier,F.W.
  TITLE     The structure of bacteriophage T7 lysozyme, a zinc amidase and an
            inhibitor of T7 RNA polymerase
  JOURNAL   Proc Natl Acad Sci U S A 91 (9), 4034-4038 (1994)
   PUBMED   8171031
REFERENCE   2  (residues 1 to 630)
  AUTHORS   Wang,X., Wilkinson,B.J. and Jayaswal,R.K.
  TITLE     Sequence analysis of a Staphylococcus aureus gene encoding a
            peptidoglycan hydrolase activity
  JOURNAL   Gene 102 (1), 105-109 (1991)
   PUBMED   1677905
REFERENCE   3  (residues 1 to 630)
  AUTHORS   Potvin,C., Leclerc,D., Tremblay,G., Asselin,A. and Bellemare,G.
  TITLE     Cloning, sequencing and expression of a Bacillus bacteriolytic
            enzyme in Escherichia coli
  JOURNAL   Mol Gen Genet 214 (2), 241-248 (1988)
   PUBMED   3070348
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013661.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01510.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Streptomyces mesophilus"
                     /db_xref="taxon:1775132"
     Protein         1..630
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /EC_number="3.5.1.28"
                     /GO_function="GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=67485
     Region          <123..190
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
     Region          240..409
                     /region_name="AmpD"
                     /note="N-acetyl-anhydromuramyl-L-alanine amidase AmpD
                     [Cell wall/membrane/envelope biogenesis]; COG3023"
                     /db_xref="CDD:442259"
ORIGIN      
        1 mplvaaapsg eqstapsarl qgafsaaaae fqvpqsvllg vsylqsrwdg hagapsvagg
       61 ygpmhltdaa talkaeaphh shgeedargd ssrparvpea elpdaselpa rlrtltraae
      121 ltgisaeelr tdpaanlrgg aallaeaqkk agkplsadpa dwyaavaays gaddeataas
      181 yanevfavir dgasrttdag qrvaldatpa aapdaaqleg lglrraakge tdcpptiace
      241 wipapyeefg eddygnhdka nrpedqsidy ivvhdtegrw dtvlklvqdp tyvswqyslr
      301 atdghiaqhl klkdvgwhag nwyinsksig lehegfltqp dtwyteamyr tsarlvkyls
      361 krygipldrq hilghdtvpg ptagtipgmh tdpgpywdwq hyftllgkpf hrsagpsggl
      421 vtilpeydeh speftgctka gekcpahgss avrvytepre daplikdigl rpgggastig
      481 vndlgsrvst gqryavaerk gdwtaiwylg qkawfknpkk qptavdaagl vitpkagrtd
      541 vpvygraype aaayegtgia pqpvsalpyk llagqeyaag dktpgeyyfa pvfdtsghkv
      601 vrgkdeyyei qfghrvafvr aadvevksss
//
LOCUS       WP_235967531              74 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6126 family protein [Streptomyces mesophilus].
ACCESSION   WP_235967531
VERSION     WP_235967531.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces mesophilus
  ORGANISM  Streptomyces mesophilus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 74)
  AUTHORS   Bentley,S.D., Chater,K.F., Cerdeno-Tarraga,A.M., Challis,G.L.,
            Thomson,N.R., James,K.D., Harris,D.E., Quail,M.A., Kieser,H.,
            Harper,D., Bateman,A., Brown,S., Chandra,G., Chen,C.W., Collins,M.,
            Cronin,A., Fraser,A., Goble,A., Hidalgo,J., Hornsby,T., Howarth,S.,
            Huang,C.H., Kieser,T., Larke,L., Murphy,L., Oliver,K., O'Neil,S.,
            Rabbinowitsch,E., Rajandream,M.A., Rutherford,K., Rutter,S.,
            Seeger,K., Saunders,D., Sharp,S., Squares,R., Squares,S.,
            Taylor,K., Warren,T., Wietzorrek,A., Woodward,J., Barrell,B.G.,
            Parkhill,J. and Hopwood,D.A.
  TITLE     Complete genome sequence of the model actinomycete Streptomyces
            coelicolor A3(2)
  JOURNAL   Nature 417 (6885), 141-147 (2002)
   PUBMED   12000953
REFERENCE   2  (residues 1 to 74)
  AUTHORS   Redenbach,M., Kieser,H.M., Denapaite,D., Eichner,A., Cullum,J.,
            Kinashi,H. and Hopwood,D.A.
  TITLE     A set of ordered cosmids and a detailed genetic and physical map
            for the 8 Mb Streptomyces coelicolor A3(2) chromosome
  JOURNAL   Mol Microbiol 21 (1), 77-96 (1996)
   PUBMED   8843436
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040000.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19621.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Streptomyces mesophilus"
                     /db_xref="taxon:1775132"
     Protein         1..74
                     /product="DUF6126 family protein"
                     /calculated_mol_wt=7823
     Region          34..73
                     /region_name="DUF6126"
                     /note="Family of unknown function (DUF6126); pfam19621"
                     /db_xref="CDD:466130"
ORIGIN      
        1 mtsetgegtt resgggaahe paggttsesp ggarrfiedk fprglvirlf vyliaghffa
       61 ffvyllfvlg grnq
//
LOCUS       WP_235967659              91 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-N-acetylglucosaminidase C-terminal domain-containing protein
            [Streptomyces mesophilus].
ACCESSION   WP_235967659
VERSION     WP_235967659.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces mesophilus
  ORGANISM  Streptomyces mesophilus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 91)
  AUTHORS   Ficko-Blean,E., Stubbs,K.A., Nemirovsky,O., Vocadlo,D.J. and
            Boraston,A.B.
  TITLE     Structural and mechanistic insight into the basis of
            mucopolysaccharidosis IIIB
  JOURNAL   Proc Natl Acad Sci U S A 105 (18), 6560-6565 (2008)
   PUBMED   18443291
REFERENCE   2  (residues 1 to 91)
  AUTHORS   Villani,G.R., Follenzi,A., Vanacore,B., Di Domenico,C., Naldini,L.
            and Di Natale,P.
  TITLE     Correction of mucopolysaccharidosis type IIIb fibroblasts by
            lentiviral vector-mediated gene transfer
  JOURNAL   Biochem J 364 (Pt 3), 747-753 (2002)
   PUBMED   12049639
REFERENCE   3  (residues 1 to 91)
  AUTHORS   Li,H.H., Yu,W.H., Rozengurt,N., Zhao,H.Z., Lyons,K.M.,
            Anagnostaras,S., Fanselow,M.S., Suzuki,K., Vanier,M.T. and
            Neufeld,E.F.
  TITLE     Mouse model of Sanfilippo syndrome type B produced by targeted
            disruption of the gene encoding alpha-N-acetylglucosaminidase
  JOURNAL   Proc Natl Acad Sci U S A 96 (25), 14505-14510 (1999)
   PUBMED   10588735
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024374.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12972.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Streptomyces mesophilus"
                     /db_xref="taxon:1775132"
     Protein         1..91
                     /product="alpha-N-acetylglucosaminidase C-terminal
                     domain-containing protein"
                     /calculated_mol_wt=10265
     Region          <2..83
                     /region_name="NAGLU_C"
                     /note="Alpha-N-acetylglucosaminidase (NAGLU) C-terminal
                     domain; pfam12972"
                     /db_xref="CDD:463763"
ORIGIN      
        1 mlwghrqaad ggglrdyanr ewsglidgly tlrwrtyfae ltsalaeere papidwyale
       61 ehwlrthpay ptkpsgdivr iarkvaravg a
//
LOCUS       WP_235968026             453 aa            linear   BCT 02-MAR-2025
DEFINITION  PspC domain-containing protein [Streptomyces mesophilus].
ACCESSION   WP_235968026
VERSION     WP_235968026.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces mesophilus
  ORGANISM  Streptomyces mesophilus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 453)
  AUTHORS   Brissette,J.L., Weiner,L., Ripmaster,T.L. and Model,P.
  TITLE     Characterization and sequence of the Escherichia coli
            stress-induced psp operon
  JOURNAL   J Mol Biol 220 (1), 35-48 (1991)
   PUBMED   1712397
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015957.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04024.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Streptomyces mesophilus"
                     /db_xref="taxon:1775132"
     Protein         1..453
                     /product="PspC domain-containing protein"
                     /calculated_mol_wt=46536
     Region          39..99
                     /region_name="PspC"
                     /note="Phage shock protein PspC (stress-responsive
                     transcriptional regulator) [Transcription, Signal
                     transduction mechanisms]; COG1983"
                     /db_xref="CDD:441586"
     Region          345..448
                     /region_name="DUF2154"
                     /note="Cell wall-active antibiotics response 4TMS YvqF;
                     cl41858"
                     /db_xref="CDD:477831"
ORIGIN      
        1 mtdqhdtrta epadavpgag rtgtgtvgae apaaeaqprl rrdrehkvlg gvcaglgrhc
       61 dmdpvifriv lallgavggi glifygfawl lipadgeden earrmltgrv dgpaltallf
      121 alvgsgvmls mvnnagvltf asvlavllag agywskerrk dtpspdpvaa qaaadappet
      181 qappvtrgps wwrdpivkdg theggtgylw gpaelsgvel pakdpagrsa qvlaprrgpr
      241 wiggwiflla laagitgtav alnemganpp lgtaltagla calavlalgi avssffgrtg
      301 agsvllalii agllagasal pkeittnwvr tqwqptaaad vrpaydigsg egtldlskld
      361 lkkdqtvtts skigagrikv ivpydatvka dvqvgvgdiq lpeghargdi dvspdqrrsi
      421 vlrppgdakd gggtidltld valgqaevtr aak
//
LOCUS       WP_235968122             450 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Streptomyces mesophilus].
ACCESSION   WP_235968122
VERSION     WP_235968122.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces mesophilus
  ORGANISM  Streptomyces mesophilus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Streptomyces mesophilus"
                     /db_xref="taxon:1775132"
     Protein         1..450
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47314
     Region          28..417
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(32..33,36..37,40,72,122..123,125..127,130,150,
                     153..154,157,255,258..259,262..264,267,295,299,349..350,
                     354,358,374,377..378,381..382,385)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 msipadggly avatrkamlr llpllclayf msyvdrtnia lakthlqadv gisvaafglg
       61 aglffltyal fevpsnlimy rvgprrwiar ialswgavta lmmfiandit fyigrmalga
      121 aeaglypamm fmmtrwfaqk drataigfiy laptlglllg gplggalmel ddlagfhgwq
      181 wmflieglvt mviglvvlaf lpevpsdarw lradeaaals eqadqgadpr aghslkgnlg
      241 qafgrpfill igviyflnqv tmngvtfnvp siiesldvsg sfligllsgv tgiggtigvl
      301 vmpalfrrlp resltigvla vapaaiaavf lavssptvri vligimsaii fgtlpifwsv
      361 amarmsgiva aaglafintv gltggfvgpy lfglaeadsg dpasgfsivi iasliggala
      421 lalhralrhe daksapaaap vpernpevqp
//
LOCUS       WP_235968302             488 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Streptomyces mesophilus].
ACCESSION   WP_235968302
VERSION     WP_235968302.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces mesophilus
  ORGANISM  Streptomyces mesophilus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Streptomyces mesophilus"
                     /db_xref="taxon:1775132"
     Protein         1..488
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=49421
     Region          41..440
                     /region_name="efflux_EmrB"
                     /note="drug resistance transporter, EmrB/QacA subfamily;
                     TIGR00711"
                     /db_xref="CDD:129794"
ORIGIN      
        1 mrttdirtgs rpvesarrtr vrrtrdprra alvvltaaal mtildgnvvt vampaiqadl
       61 gftpaglawv vnaylipfgg llllagrlgd lvgrkrmfts glavftaasl fagiatqpwt
      121 liaaralqgv ggamtsavvl gmlvalfpga reqakaiavf saagaaggal gtflggaltq
      181 llgwnwifli nlpigavalv aafrvleadr gkglragadf pgaalitgal mltvftivea
      241 gthagtttaa lavlasalla afvvrqaraa rplvrlglfr srslsganai qvlmiagmyg
      301 fqfigalylq qvlgydellt gvaflpapvv igvlmlglsa rmigrfgahr vlpaglaliv
      361 aglallgrap aegayvvdvl pallllgggf aaampavtal amagvrkeda glasglfstt
      421 qvvggslgla vlttlaasrt rsltgggass vaalnsgfql afwvaagvva vglvaavlvl
      481 hrvrplah
//
LOCUS       WP_417281880             887 aa            linear   BCT 02-MAR-2025
DEFINITION  type VI secretion system ATPase TssH [Castellaniella hirudinis].
ACCESSION   WP_417281880
VERSION     WP_417281880.1
KEYWORDS    RefSeq.
SOURCE      Castellaniella hirudinis
  ORGANISM  Castellaniella hirudinis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Castellaniella.
REFERENCE   1  (residues 1 to 887)
  AUTHORS   Shalom,G., Shaw,J.G. and Thomas,M.S.
  TITLE     In vivo expression technology identifies a type VI secretion system
            locus in Burkholderia pseudomallei that is induced upon invasion of
            macrophages
  JOURNAL   Microbiology (Reading) 153 (Pt 8), 2689-2699 (2007)
   PUBMED   17660433
REFERENCE   2  (residues 1 to 887)
  AUTHORS   Mougous,J.D., Cuff,M.E., Raunser,S., Shen,A., Zhou,M.,
            Gifford,C.A., Goodman,A.L., Joachimiak,G., Ordonez,C.L., Lory,S.,
            Walz,T., Joachimiak,A. and Mekalanos,J.J.
  TITLE     A virulence locus of Pseudomonas aeruginosa encodes a protein
            secretion apparatus
  JOURNAL   Science 312 (5779), 1526-1530 (2006)
   PUBMED   16763151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: TIGR03345.1
            Evidence Source    :: JCVI
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..887
                     /organism="Castellaniella hirudinis"
                     /db_xref="taxon:1144617"
     gene            1..887
                     /gene="tssH"
                     /gene_synonym="clpV"
     Protein         1..887
                     /product="type VI secretion system ATPase TssH"
                     /GO_component="GO:0033104 - type VI protein secretion
                     system complex [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /GO_process="GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /calculated_mol_wt=96783
     Region          13..875
                     /region_name="VI_ClpV1"
                     /note="type VI secretion ATPase, ClpV1 family; TIGR03345"
                     /db_xref="CDD:274528"
ORIGIN      
        1 mpivefkslv srlnptcrda lenaaglcln rthyeitieh mlarllddpg sdlhlilkqa
       61 didpgrvlra ldqalesfka gntgrpqfsp llpdlfgdaw miasvdlyeq sirsgallaa
      121 fvqrasfyag ttyagllqdl dkprilellg vvaaasresg eavrsggapg aqagadgqrq
      181 gtaiqrfced ftakaregki dpvfgrdaei rqmvdilarr rknnpicvgd pgvgktavie
      241 glalriaedd vpellrnvtl lgldlgalea gagvkgefen rlrgvineik asptpiilfi
      301 deahtligag gsagtsdaan llkpalarge lrtiaattws eykkyfekdp alarrfelvk
      361 ldepgvgmav qilrglkery eqvhqviire dalhaaaels dryitgrqlp dkaidlldta
      421 carikvnlss kpdfiedrer tlqmlerekr glqrdienri avdtnrlqei dehaartqae
      481 ldalqarfqa qfdaarhilr lraqragtqd sgadaagqdt gtprdaaale aelvqaeqaf
      541 ealqadekli fidvspdtia kvvsdrtgip lgkmlrdqas talaledtlk qrirgqdtam
      601 atlaevlksa rsglrdpdqp mgifllvgps gtgktetals vadlmfggeq slitinmsef
      661 qekhtvsrlv gsppgyvgyg eggvlteavr qrpysvvlld evekahldvv nlfyqvfdkg
      721 vlsdgegrei nfrntvvflt snlgldvite mcagdepapi eaiqaairpi lshhfkpall
      781 armtivpymm lradalegiv rlklhklvqr mqrnnkitld iseaaiqait qrctevetga
      841 rnidfilrgs ilpllsntll ermseadtls ravldtdahg qftarfe
//
LOCUS       WP_235968605            1096 aa            linear   BCT 02-MAR-2025
DEFINITION  BTAD domain-containing putative transcriptional regulator, partial
            [Streptomyces mesophilus].
ACCESSION   WP_235968605
VERSION     WP_235968605.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces mesophilus
  ORGANISM  Streptomyces mesophilus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 1096)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015649.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03704.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Streptomyces mesophilus"
                     /db_xref="taxon:1775132"
     Protein         1..>1096
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
     Region          2..>140
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(4..7,11,27,29,57,73..76,120,124..125,127,138..139)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          242..444
                     /region_name="DnrI"
                     /note="DNA-binding transcriptional regulator
                     DnrI/AfsR/EmbR, SARP family, contains BTAD domain
                     [Transcription]; COG3629"
                     /db_xref="CDD:442847"
     Region          <779..909
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          870..1062
                     /region_name="HAD-SF-IA-v3"
                     /note="haloacid dehalogenase superfamily, subfamily IA,
                     variant 3 with third motif having DD or ED; TIGR01509"
                     /db_xref="CDD:273662"
ORIGIN      
        1 mraigtggrq awfardvleg rdvllralrq lhpdspeera frqrahllrs lnhphlvrty
       61 dyvyergvpy vaqeyvdgvs lgdvlrgadg plpfwllarl aahtaralaa aheqslghgp
      121 lrpadvlida sdgtvkltgf ldgapahppr edashlrlml rdlggfksfs pwsltdwqvl
      181 sgvhpatrdi drgpdalisl lasaefepit qraaaqapqf qligtqlcpa adqlspdtqa
      241 clvilleryg rsvpavdlsl gleerprtae efhhhldelm rvlgpgvias gpggfavlac
      301 paqidvhair avvdragdpq dtddtrtrrs miqsaldgfe deplpgipgp aarrmratlr
      361 alrlqllvsr seadldlgdy eraaidltyl larhpdhqdf rrlhmlalrh lgrigeaies
      421 yeeyrlrldg pnpdttllgl hdelyrella sperersaiv fefiagtpdd neraqsvvgr
      481 fvndllardv lapdahella rtngylvite pgtsvlpllp tllaelarlq relptqvslr
      541 vmfwhnarpv ghlgpsslaq hmapvpgdal vilspplyee alsgavplsp sgftpvseqg
      601 evvayvhwva peplatqsfe gvianepses seppesaesa grerepardl lqgpftipgt
      661 eipkvnsatt avvyldeded ihdpdlhaad vtryyevdlt phqewrelpl psaatlpfta
      721 svelswqvsd aiafaysdvt svatplfehl srqlaritrr ytvarlgaaq qavqeahfap
      781 wpvpgltvsh airlsttapp prtaeeppqv tpqqpapmpp qeqaqpstep rppsqpqptg
      841 pqrphaqhqp ppnqtpsssp lsdalstarv vllsfdgpvv rlyaqhtats isrelartit
      901 elrhpdealr gdrllkgtpi npsegyahpl dllraiahhr laptvaeqlt qselrtvtss
      961 fptphadpli rtlhaqgriv givtdvdpvv vstyldsrgl ggtlrggvhg rttdltrlmp
     1021 hpdclrrala aagctpsdal litssvaele aaetlgitti gyardertrs rleaagchtt
     1081 itdlhpllaa araipp
//
LOCUS       WP_235969008             504 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: response regulator [Brevundimonas].
ACCESSION   WP_235969008
VERSION     WP_235969008.1
KEYWORDS    RefSeq.
SOURCE      Brevundimonas
  ORGANISM  Brevundimonas
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Caulobacterales; Caulobacteraceae.
REFERENCE   1  (residues 1 to 504)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Brevundimonas"
                     /db_xref="taxon:41275"
     Protein         1..504
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=54607
     Region          <13..78
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Region          <56..126
                     /region_name="FixJ"
                     /note="DNA-binding response regulator, FixJ family,
                     consists of REC and HTH domains [Signal transduction
                     mechanisms, Transcription]; COG4566"
                     /db_xref="CDD:443623"
     Site            order(57..60,62)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
     Region          <123..503
                     /region_name="PRK13557"
                     /note="histidine kinase; Provisional"
                     /db_xref="CDD:237425"
ORIGIN      
        1 maivvedvlr sadlnglstw iqsqpswsdf pfliltqrgg svernplaqr lsqtlgnvgf
       61 lerpfhpttl vsavrtalrg rsrqyearer ieqirrgeel lerrilerta eleaanrqla
      121 dqiaerekae dalrqaqrle avgqltsgia hdfnnlltvi ignveqirkr tedpalkkrl
      181 smmaeashrg aqltaqmlaf srrqkleprp vdlnetvrsm kdllqstigg tvrilepdla
      241 ddlwpamidp tqielvilnl ainardamdv ggtlriqtan vvapepvtpe qppagdhvvv
      301 svaddgsgms devlarvfep ffttkavgkg sglglsqvyg lakqsgggvt idtaigrgtt
      361 iriflprada tpqketvpdt aisaaplpdt tilvvdddda vravtsgilv dlgyrvieag
      421 sggaaldmfd qhpdiqavvl dfampgmngg evaremtvrr pglpiifatg yadieglaat
      481 tedriirkpf dqsdlarkls lalg
//
LOCUS       WP_235969032             662 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Brucella
            tritici].
ACCESSION   WP_235969032
VERSION     WP_235969032.1
KEYWORDS    RefSeq.
SOURCE      Brucella tritici (Ochrobactrum tritici)
  ORGANISM  Brucella tritici
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 662)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Brucella tritici"
                     /db_xref="taxon:94626"
     Protein         1..662
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=71463
     Region          55..662
                     /region_name="TonB-hemin"
                     /note="TonB-dependent heme/hemoglobin receptor family
                     protein; TIGR01785"
                     /db_xref="CDD:273807"
ORIGIN      
        1 mratggvhkh silastglav ilvamtsqaf aqeqkaseee agvalktiti rrateaapvg
       61 rvdreeinrf ggaklddvlr gtagvftlqn asnpgvavni rgfegsgrvn mmidgvpqsy
      121 rntahdaqgy ayidpnllse idvargavtt eggtglagsv nfrtigvddv ildgkdkgvl
      181 graswgsngt gfsemlagaa rvnsigivaa isrhdssdyk ngdgatveks geeltsglfk
      241 aefglgedqk ltlggvlynn hygtyangyr pgtytiydmf lqnrtffaqy nynpsdndli
      301 dldvnlyhns tlqnwvggng syvgrqistd ttgmtasnts rftfgdvava wkngfeinrd
      361 naggnitgvn ptdatsnrsa vfseatwnyq alqvitglry dyfkleseds sisnsdgels
      421 pkvtvaynvt dwlqpyitya hsmrsptlqe tflggvahag ttglrgnpdl rpekqrgwef
      481 gvniardgif taedglrika nyymmrvedy itasstnsqf invdgisdvk gfeldaryda
      541 gfafggiayt hstselpeqt aglganqylp edvvtvtaga rfferklesg lrvqhvssgr
      601 sitgndtdpy tlvdvfakyk ftdtvdlslq vlnitdkeyt palstygsgr grtflvstqf
      661 qf
//
LOCUS       WP_235969025             717 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein
            [Phocicoccus schoeneichii].
ACCESSION   WP_235969025
VERSION     WP_235969025.1
KEYWORDS    RefSeq.
SOURCE      Phocicoccus schoeneichii
  ORGANISM  Phocicoccus schoeneichii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Salinicoccaceae; Phocicoccus.
REFERENCE   1  (residues 1 to 717)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Phocicoccus schoeneichii"
                     /db_xref="taxon:1812261"
     Protein         1..717
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /calculated_mol_wt=80892
     Region          22..587
                     /region_name="FtsI"
                     /note="Cell division protein FtsI, peptidoglycan
                     transpeptidase (Penicillin-binding protein 2) [Cell cycle
                     control, cell division, chromosome partitioning, Cell
                     wall/membrane/envelope biogenesis]; COG0768"
                     /db_xref="CDD:440531"
     Region          602..654
                     /region_name="PASTA"
                     /note="PASTA domain. This domain is found at the C-termini
                     of several Penicillin-binding proteins (PBPs) and
                     bacterial serine/threonine kinases. It is a small globular
                     fold consisting of 3 beta-sheets and an alpha-helix. The
                     name PASTA is derived from PBP and...; cl02768"
                     /db_xref="CDD:470670"
     Region          658..710
                     /region_name="PASTA domain"
                     /note="PASTA domain [structural motif]"
                     /db_xref="CDD:275384"
     Region          658..710
                     /region_name="PASTA_Pbp2x-like_2"
                     /note="PASTA domain of PBP2x-like proteins, second repeat.
                     Penicillin-binding proteins (PBPs) are the major targets
                     for beta-lactam antibiotics, like penicillins and
                     cephalosporins. Beta-lactam antibiotics specifically
                     inhibit transpeptidase activity by...; cd06575"
                     /db_xref="CDD:119326"
ORIGIN      
        1 mkkrmskdfk ainthnipkf tlliyiilgv ffgfiilnfi nlmifksidd sdlqklgeek
       61 ftrsitldsn rgqildrhge ilasdmeayr iavivdenyp nhltdkkkms kelskvmsms
      121 ekeitkmide gikndrfqve fgtkgrnvsy knrkqleske ldgltfipei krfypngvfa
      181 shiigfsepn edgrlvgslg iereyneald gepgysnytq diwsyvvpgt letesavdgm
      241 dveltldsni qlyleeslde mqeyfepeel fafvadaktg eilgagqrps fnpdtregfg
      301 nswlnvlyey qfepgstfkv fglaaaieeg qynpnqyyes gsrdvmdtti ydwetegwgt
      361 itynegmqys sntlmmdlqd rvgadkmldy ykkfgfgett esefsteakg qivwenelqq
      421 ktssfgqtls vtpiqmiqgm tallnegmmk kpyivksvtd pntnktvyeg ketnvrqvis
      481 keaaektvde mntlvagsmd rnsmyalddy gvtgksgtaq iydpeiggyi sepyqfitsf
      541 igyapkedpr vivyygikra sknksdtwdy gvslgfnplm ertlkylevt dstegsdaee
      601 vkvedytgkk iervanltnd slnviysgeg dtikdhypkn atllknetiy vktdgeltmp
      661 dmrglskrev itlldflgik aslkgegyvk sqsiapntvl gkkssltiql dsndpnn
//
LOCUS       WP_235969152             151 aa            linear   BCT 02-MAR-2025
DEFINITION  adenosylcobinamide amidohydrolase [Brucella tritici].
ACCESSION   WP_235969152
VERSION     WP_235969152.1
KEYWORDS    RefSeq.
SOURCE      Brucella tritici (Ochrobactrum tritici)
  ORGANISM  Brucella tritici
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 151)
  AUTHORS   Woodson,J.D. and Escalante-Semerena,J.C.
  TITLE     CbiZ, an amidohydrolase enzyme required for salvaging the coenzyme
            B12 precursor cobinamide in archaea
  JOURNAL   Proc Natl Acad Sci U S A 101 (10), 3591-3596 (2004)
   PUBMED   14990804
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014060.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01955.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Brucella tritici"
                     /db_xref="taxon:94626"
     Protein         1..151
                     /product="adenosylcobinamide amidohydrolase"
                     /calculated_mol_wt=16141
     Region          40..>146
                     /region_name="CbiZ"
                     /note="Adenosylcobinamide amidohydrolase; cl00808"
                     /db_xref="CDD:469934"
ORIGIN      
        1 mgslvdgwka lvansaaicd rlvmlpftih csgpvltaef pdrqnilsws ltcpgfvsaq
       61 svawlevrnd dltldvdpav llqerlaqag ygeavqmmts rsvqkhhvat rrsgeahaac
      121 latvglsnag rvgelsqlkm pagtinrern e
//
LOCUS       WP_235969365             372 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome P450 [Pseudorhizobium flavum].
ACCESSION   WP_235969365
VERSION     WP_235969365.1
KEYWORDS    RefSeq.
SOURCE      Pseudorhizobium flavum
  ORGANISM  Pseudorhizobium flavum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Pseudorhizobium.
REFERENCE   1  (residues 1 to 372)
  AUTHORS   Werck-Reichhart,D. and Feyereisen,R.
  TITLE     Cytochromes P450: a success story
  JOURNAL   Genome Biol 1 (6), REVIEWS3003 (2000)
   PUBMED   11178272
REFERENCE   2  (residues 1 to 372)
  AUTHORS   Graham-Lorence,S., Amarneh,B., White,R.E., Peterson,J.A. and
            Simpson,E.R.
  TITLE     A three-dimensional model of aromatase cytochrome P450
  JOURNAL   Protein Sci 4 (6), 1065-1080 (1995)
   PUBMED   7549871
REFERENCE   3  (residues 1 to 372)
  AUTHORS   Degtyarenko,K.N. and Archakov,A.I.
  TITLE     Molecular evolution of P450 superfamily and P450-containing
            monooxygenase systems
  JOURNAL   FEBS Lett 332 (1-2), 1-8 (1993)
   PUBMED   8405421
REFERENCE   4  (residues 1 to 372)
  AUTHORS   Nelson,D.R., Kamataki,T., Waxman,D.J., Guengerich,F.P.,
            Estabrook,R.W., Feyereisen,R., Gonzalez,F.J., Coon,M.J.,
            Gunsalus,I.C., Gotoh,O. et al.
  TITLE     The P450 superfamily: update on new sequences, gene mapping,
            accession numbers, early trivial names of enzymes, and nomenclature
  JOURNAL   DNA Cell Biol 12 (1), 1-51 (1993)
   PUBMED   7678494
REFERENCE   5  (residues 1 to 372)
  AUTHORS   Guengerich,F.P.
  TITLE     Reactions and significance of cytochrome P-450 enzymes
  JOURNAL   J Biol Chem 266 (16), 10019-10022 (1991)
   PUBMED   2037557
REFERENCE   6  (residues 1 to 372)
  AUTHORS   Nebert,D.W. and Gonzalez,F.J.
  TITLE     P450 genes: structure, evolution, and regulation
  JOURNAL   Annu Rev Biochem 56, 945-993 (1987)
   PUBMED   3304150
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00067.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Pseudorhizobium flavum"
                     /db_xref="taxon:1335061"
     Protein         1..372
                     /product="cytochrome P450"
                     /GO_function="GO:0004497 - monooxygenase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=42348
     Region          1..362
                     /region_name="CYP152"
                     /note="cytochrome P450 family 152, also called fatty acid
                     hydroxylases or P450 peroxygenases; cd11067"
                     /db_xref="CDD:410690"
     Site            order(11,18,36..37,44,48,51,55,191..192,195..196,198..199,
                     202,240..241,244,269,302..304,311..316,319..320)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410690"
ORIGIN      
        1 mtgpeaaelf yrqdlfarsg aapgrvqktl fgqggvqgld geahrhrkqm fmslmtperi
       61 ealkeltaew wrtyaqkwtt mdrvilydev qelltravca wvgvplpeae agrraaelta
      121 lfdyagsvgp khwwsrlsrr rceswiegiv eqiragdlsp pegsaarvia twrdqdgall
      181 spriaavell nilrptvava vfivfaahal hgfpacrpkl qtgdeypelf vqeirrlypf
      241 fpavmartrh nfewngyrfp rgrrvmldly gtnrdarawd apeefrpdrf rswdgspfnf
      301 ipqgggdhhm nhrcpgewmt ielmklscrf laasieydlp dqdlriditr lpaipksrfv
      361 msnlryaigg as
//
LOCUS       WP_235969369              93 aa            linear   BCT 02-MAR-2025
DEFINITION  porin, partial [Pseudorhizobium flavum].
ACCESSION   WP_235969369
VERSION     WP_235969369.1
KEYWORDS    RefSeq.
SOURCE      Pseudorhizobium flavum
  ORGANISM  Pseudorhizobium flavum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Pseudorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014577.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02530.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Pseudorhizobium flavum"
                     /db_xref="taxon:1335061"
     Protein         1..>93
                     /product="porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          30..>93
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mnikslllgs aaalaavsga qaadaiiaae pepmeyvrvc dafgtgyfyi pgtetclkis
       61 gyvrvqvdgr sdfdldgvdl qdggyrtntr aql
//
LOCUS       WP_235969388              99 aa            linear   BCT 02-MAR-2025
DEFINITION  arginase family protein [Anaeromyxobacter diazotrophicus].
ACCESSION   WP_235969388
VERSION     WP_235969388.1
KEYWORDS    RefSeq.
SOURCE      Anaeromyxobacter diazotrophicus
  ORGANISM  Anaeromyxobacter diazotrophicus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00491.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Anaeromyxobacter diazotrophicus"
                     /db_xref="taxon:2590199"
     Protein         1..99
                     /product="arginase family protein"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=9966
     Region          <21..89
                     /region_name="Arginase_HDAC"
                     /note="Arginase-like and histone-like hydrolases; cl17011"
                     /db_xref="CDD:450134"
ORIGIN      
        1 marscrgwqg pglswrgsra fdvdavdpaf apgtgtpvpg gltsrealql vralagvala
       61 gmdvvevcpp ldhadvtshl aahvlfegla laavirgpa
//
LOCUS       WP_235969397             263 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar biosynthetic protein FliR [Anaeromyxobacter
            diazotrophicus].
ACCESSION   WP_235969397
VERSION     WP_235969397.1
KEYWORDS    RefSeq.
SOURCE      Anaeromyxobacter diazotrophicus
  ORGANISM  Anaeromyxobacter diazotrophicus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.
REFERENCE   1  (residues 1 to 263)
  AUTHORS   Zhuang,W.Y. and Shapiro,L.
  TITLE     Caulobacter FliQ and FliR membrane proteins, required for flagellar
            biogenesis and cell division, belong to a family of virulence
            factor export proteins
  JOURNAL   J Bacteriol 177 (2), 343-356 (1995)
   PUBMED   7814323
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013478.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01311.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Anaeromyxobacter diazotrophicus"
                     /db_xref="taxon:2590199"
     Protein         1..263
                     /product="flagellar biosynthetic protein FliR"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0006605 - protein targeting [Evidence
                     IEA]"
                     /calculated_mol_wt=24773
     Region          11..>165
                     /region_name="EscT"
                     /note="Type III secretory pathway, EscT/YscT component
                     [Intracellular trafficking, secretion, and vesicular
                     transport]; COG4791"
                     /db_xref="CDD:443820"
ORIGIN      
        1 mtatplldav aplvpgaaaa alhgvrllpa allcpflggp lvppavrgal afglgasaws
       61 aagggafagg arellaaaar elalgaglgf laglpfeaar aggrlvdtlr gatlaelhva
      121 plrqresaag dlltqwmvvl aaaaggdrlv vaalldsfra apvgagalpp glleaglrga
      181 gellacaval gapaaagvla adlavalalr aapqlalspa aqparaalgl lplalgaaal
      241 agrltaaval aagllrgaaa gap
//
LOCUS       WP_235969408             231 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1054 family protein [Anaeromyxobacter diazotrophicus].
ACCESSION   WP_235969408
VERSION     WP_235969408.1
KEYWORDS    RefSeq.
SOURCE      Anaeromyxobacter diazotrophicus
  ORGANISM  Anaeromyxobacter diazotrophicus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018084.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06335.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Anaeromyxobacter diazotrophicus"
                     /db_xref="taxon:2590199"
     Protein         1..231
                     /product="DUF1054 family protein"
                     /calculated_mol_wt=24221
     Region          21..>110
                     /region_name="DUF1054"
                     /note="Protein of unknown function (DUF1054); cl19868"
                     /db_xref="CDD:473240"
ORIGIN      
        1 mvrcllsrgl gvpmaglgig peefalfria dpdqrarale dtlvpalarl gaelaaglsr
       61 vvgtplapep grlarrrdep peevlvafca gdrgyraaph lalavsrahl harvaaraaa
      121 drgggmrral lreaqslark gkpfrklrsy agweheelpe lapahsaafw celadalasa
      181 asagvdvgva wpaeearsla vgdvlgvfrd laplykllaa gaavpapdlt r
//
LOCUS       WP_235969417             222 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphatase PAP2-related protein [Anaeromyxobacter diazotrophicus].
ACCESSION   WP_235969417
VERSION     WP_235969417.1
KEYWORDS    RefSeq.
SOURCE      Anaeromyxobacter diazotrophicus
  ORGANISM  Anaeromyxobacter diazotrophicus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025718.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14360.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Anaeromyxobacter diazotrophicus"
                     /db_xref="taxon:2590199"
     Protein         1..222
                     /product="phosphatase PAP2-related protein"
                     /calculated_mol_wt=24088
     Region          152..212
                     /region_name="PAP2_C"
                     /note="PAP2 superfamily C-terminal; pfam14360"
                     /db_xref="CDD:464150"
ORIGIN      
        1 msgparrlra lalpillala frgacyalmt aaavwaerrp apgalpdlvl galpylgwva
       61 ranyllwlal ylplalalla tdpdrwvrym vtgglvslar gvtlaltglg ppdpahagpg
      121 ladrgawqaw lelvspwgvf ahgsaqaylt kdlffsghta ttfllllyaw rdrrlrwlal
      181 aahvlvvasv llarihyaid vagawaftfa lyaarewrpr ra
//
LOCUS       WP_235969465             438 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Anaeromyxobacter diazotrophicus].
ACCESSION   WP_235969465
VERSION     WP_235969465.1
KEYWORDS    RefSeq.
SOURCE      Anaeromyxobacter diazotrophicus
  ORGANISM  Anaeromyxobacter diazotrophicus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Anaeromyxobacter diazotrophicus"
                     /db_xref="taxon:2590199"
     Protein         1..438
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=47197
     Region          17..407
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mtpspepsar vgylmswypa vtetfilhem lelrrlgvdl eifplfgaat glrqpgaeal
       61 tervhyhrgl saelvlaqlh wlarrprayl gawaravagn lrspaflaka lvvvpraavv
      121 arrmeargva hvhahwathp alaayvverl tgigysftah ahdlyldram leqklaaarf
      181 vvtisrynra llerlygpaa aartvvipcg vdprlfprrp prspdglfrv acvaglrdyk
      241 ghrwlveaca llrdrgvpir cvlvgdgper aaverqvaal glgdrvalvg nqpqdriral
      301 legsdamalp svvtpagmmd gipvalmeam amglpvvstr vsgipelved grtgllappq
      361 dapalaaale rlhrdpplar rlaeagrarv larfdlrena arlrdhllaa mgapprarka
      421 parapqelgp aassgaae
//
LOCUS       WP_235969606             299 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphate acyltransferase [Anaeromyxobacter diazotrophicus].
ACCESSION   WP_235969606
VERSION     WP_235969606.1
KEYWORDS    RefSeq.
SOURCE      Anaeromyxobacter diazotrophicus
  ORGANISM  Anaeromyxobacter diazotrophicus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013665.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01515.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Anaeromyxobacter diazotrophicus"
                     /db_xref="taxon:2590199"
     Protein         1..299
                     /product="phosphate acyltransferase"
                     /GO_function="GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=30510
     Region          3..295
                     /region_name="PTA_PTB"
                     /note="Phosphate acetyl/butaryl transferase; cl17212"
                     /db_xref="CDD:450173"
ORIGIN      
        1 mrelveraiq agpgrvvvpg aeaesaldaa vearrrglae plllgaaaai raglaaagea
       61 pdawaiedvr dpaqaarrav ervrageaei ilkgglstge lmravldrer glragrlvsd
      121 vlvtqagvge prllgvtdgg vnvaptlaek railenavev fhrlgvarpr vaalcaletv
      181 spamphtaea aelaalsarg elpgcevfgp valdgalsve aarhkglthp aagqadlllv
      241 paievgnalg kaftwlaarp vahvvwgala pvlipsraeg amdklcsmal gvlvarggr
//
LOCUS       WP_235969622             291 aa            linear   BCT 02-MAR-2025
DEFINITION  FHA domain-containing protein [Anaeromyxobacter diazotrophicus].
ACCESSION   WP_235969622
VERSION     WP_235969622.1
KEYWORDS    RefSeq.
SOURCE      Anaeromyxobacter diazotrophicus
  ORGANISM  Anaeromyxobacter diazotrophicus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.
REFERENCE   1  (residues 1 to 291)
  AUTHORS   Pallen,M., Chaudhuri,R. and Khan,A.
  TITLE     Bacterial FHA domains: neglected players in the phospho-threonine
            signalling game?
  JOURNAL   Trends Microbiol 10 (12), 556-563 (2002)
   PUBMED   12564991
REFERENCE   2  (residues 1 to 291)
  AUTHORS   Durocher,D., Henckel,J., Fersht,A.R. and Jackson,S.P.
  TITLE     The FHA domain is a modular phosphopeptide recognition motif
  JOURNAL   Mol Cell 4 (3), 387-394 (1999)
   PUBMED   10518219
REFERENCE   3  (residues 1 to 291)
  AUTHORS   Hofmann,K. and Bucher,P.
  TITLE     The FHA domain: a putative nuclear signalling domain found in
            protein kinases and transcription factors
  JOURNAL   Trends Biochem Sci 20 (9), 347-349 (1995)
   PUBMED   7482699
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012708.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00498.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Anaeromyxobacter diazotrophicus"
                     /db_xref="taxon:2590199"
     Protein         1..291
                     /product="FHA domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=29758
     Region          4..56
                     /region_name="DZR"
                     /note="Double zinc ribbon; pfam12773"
                     /db_xref="CDD:432773"
     Region          78..168
                     /region_name="FHA"
                     /note="Forkhead associated (FHA) domain, binds pSer, pThr,
                     pTyr [Signal transduction mechanisms]; COG1716"
                     /db_xref="CDD:441322"
     Region          202..291
                     /region_name="FHA"
                     /note="Forkhead associated (FHA) domain, binds pSer, pThr,
                     pTyr [Signal transduction mechanisms]; COG1716"
                     /db_xref="CDD:441322"
ORIGIN      
        1 mltcktcgvt idvtvaacpa cgaevpmarl tgmlglvcra cdayndpgar acagcgkplg
       61 adpespavag aapraqkarl vvergeapag asfelrpgea qagraegqll fpedpclspl
      121 hatfalrdgt llvrdegaag gvfvrlrglt vplrpghlfa lgerllrfgg plappappgp
      181 dgtrrlgaar pegpavviee wleggaggrs wiragpsitl grsgcsvnlg ddphlapaha
      241 ellldaggea rlrdlgsttg tflrvptgae relhdgdavr mgrevlrvel a
//
LOCUS       WP_235969629             138 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Anaeromyxobacter diazotrophicus].
ACCESSION   WP_235969629
VERSION     WP_235969629.1
KEYWORDS    RefSeq.
SOURCE      Anaeromyxobacter diazotrophicus
  ORGANISM  Anaeromyxobacter diazotrophicus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024820.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13428.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Anaeromyxobacter diazotrophicus"
                     /db_xref="taxon:2590199"
     Protein         1..138
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=14405
     Region          13..>102
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
ORIGIN      
        1 mitleelasg ttlaeaqgmt eelgraaarl agaeleagrl etareilegl avtnphdpap
       61 wamlalvarr rgrllaarvc aetayrlape daqvrlvrae vllcdpeerg raraelagla
      121 gaeatvaara ralltalg
//
LOCUS       WP_235969651             288 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Anaeromyxobacter diazotrophicus].
ACCESSION   WP_235969651
VERSION     WP_235969651.1
KEYWORDS    RefSeq.
SOURCE      Anaeromyxobacter diazotrophicus
  ORGANISM  Anaeromyxobacter diazotrophicus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14559.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Anaeromyxobacter diazotrophicus"
                     /db_xref="taxon:2590199"
     Protein         1..288
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=30699
     Region          46..>239
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Site            order(54..55,57,81,84..85,88..89,91..92,115,118..119,
                     122..123,126)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          79..109
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          114..142
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          191..219
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          225..253
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mttstatsta tatataraaa gapplllala acavaclpsp rvhpraaeei srgyrylaqd
       61 dleraeiafa halefngeip ealngagvve rrrgrleear rrfehaaraa pdfaearvnl
      121 gelsltqgda geaeahfraa lavdpdllpa rldlarallh rgrgdparqe qlfeaarrey
      181 lhlleaqpda aeawhdlgfl dlaagrhara eeeyrraael apayaealhg wcislvrlgr
      241 caegvracrr cldaapgaer cqlslrgaea caaalengta ppgewaap
//
LOCUS       WP_235969710             418 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Anaeromyxobacter diazotrophicus].
ACCESSION   WP_235969710
VERSION     WP_235969710.1
KEYWORDS    RefSeq.
SOURCE      Anaeromyxobacter diazotrophicus
  ORGANISM  Anaeromyxobacter diazotrophicus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Anaeromyxobacter diazotrophicus"
                     /db_xref="taxon:2590199"
     Protein         1..418
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=43311
     Region          15..399
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(22..23,26..27,30,62,117..118,120..122,125,145,
                     148..149,152,239,242..243,246..248,252,280,284,333..334,
                     338,342,358,361..362,365..366,369)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mngtspfaar dvrllfatra vrlfaygfls vvlvlylaaa glsearigll lsltlagdta
       61 islylttrad rlgrramlla gaglmvfaga lfavtgnfwl lllaatvgvi spagnevgpf
      121 laieqaalse alpaerrtga fawytlfgsf atalgslagg alasalqrag aaplnsyrav
      181 vvgygalgla lgvlftrlsh gveapaarra appgrpsflq rslglsssrg vvlklsalfs
      241 vdafaggfvv qafvaywfhr rfgadpallg aiffganvla gvsalsaawv arriglvrtm
      301 vfthlpsnvl lflvplmptl plamavlflr fsisqmdvpt rqsftmavvd pgersaaagv
      361 tgiartvgsa lsplaagply aapalaslpf fiagglkily dlallvafgr vappeerr
//
LOCUS       WP_235969730             282 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphodiester glycosidase family protein [Anaeromyxobacter
            diazotrophicus].
ACCESSION   WP_235969730
VERSION     WP_235969730.1
KEYWORDS    RefSeq.
SOURCE      Anaeromyxobacter diazotrophicus
  ORGANISM  Anaeromyxobacter diazotrophicus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.
REFERENCE   1  (residues 1 to 282)
  AUTHORS   Das,D., Lee,W.S., Grant,J.C., Chiu,H.J., Farr,C.L., Vance,J.,
            Klock,H.E., Knuth,M.W., Miller,M.D., Elsliger,M.A., Deacon,A.M.,
            Godzik,A., Lesley,S.A., Kornfeld,S. and Wilson,I.A.
  TITLE     Structure and function of the DUF2233 domain in bacteria and in the
            human mannose 6-phosphate uncovering enzyme
  JOURNAL   J Biol Chem 288 (23), 16789-16799 (2013)
   PUBMED   23572527
REFERENCE   2  (residues 1 to 282)
  AUTHORS   Kang,C., Riazuddin,S., Mundorff,J., Krasnewich,D., Friedman,P.,
            Mullikin,J.C. and Drayna,D.
  TITLE     Mutations in the lysosomal enzyme-targeting pathway and persistent
            stuttering
  JOURNAL   N Engl J Med 362 (8), 677-685 (2010)
   PUBMED   20147709
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021507.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09992.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Anaeromyxobacter diazotrophicus"
                     /db_xref="taxon:2590199"
     Protein         1..282
                     /product="phosphodiester glycosidase family protein"
                     /calculated_mol_wt=29834
     Region          95..268
                     /region_name="NAGPA"
                     /note="Phosphodiester glycosidase; cl46789"
                     /db_xref="CDD:481129"
ORIGIN      
        1 mplagrltpa llallvstpg gfgasgppaa sqetagfsam epglelgtfp gpagapgdak
       61 iwiarvdpar felklvnasa sdarphtvkq walgagasaa inagmfqqdg ltsvglmrtr
      121 lhennprrar sykallafdp vrpglpavrl ldgacgeldl fpppygtliq sirlvscdrq
      181 nvwapeprrw ssaalgvdgq grvlfihars pwpvhdlvda llalpidlrr amyleggkea
      241 qlfvrgggre verlgaieaa gaedraipwe ipnavvavrr sr
//
LOCUS       WP_235969731             583 aa            linear   BCT 02-MAR-2025
DEFINITION  OPT/YSL family transporter [Anaeromyxobacter diazotrophicus].
ACCESSION   WP_235969731
VERSION     WP_235969731.1
KEYWORDS    RefSeq.
SOURCE      Anaeromyxobacter diazotrophicus
  ORGANISM  Anaeromyxobacter diazotrophicus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.
REFERENCE   1  (residues 1 to 583)
  AUTHORS   Lubkowitz,M.A., Barnes,D., Breslav,M., Burchfield,A., Naider,F. and
            Becker,J.M.
  TITLE     Schizosaccharomyces pombe isp4 encodes a transporter representing a
            novel family of oligopeptide transporters
  JOURNAL   Mol Microbiol 28 (4), 729-741 (1998)
   PUBMED   9643541
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015148.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03169.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Anaeromyxobacter diazotrophicus"
                     /db_xref="taxon:2590199"
     Protein         1..583
                     /product="OPT/YSL family transporter"
                     /GO_function="GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=60999
     Region          1..577
                     /region_name="OPT"
                     /note="Predicted oligopeptide transporter, OPT family
                     [General function prediction only]; COG1297"
                     /db_xref="CDD:440908"
ORIGIN      
        1 matpsthvpa qpsaapvrrr eltaravavs vlvaiimgas fppvvlkigy gpnisvsaaf
       61 fgfialaita alsrvgatvy eanmaqtagt aageigfmci vlaaidmlnd rpglgfslhl
      121 tgwqiflwlt fagltgafla iplrrhyide enltfadgta agetlvvlyq gareaamrlk
      181 alfaglglsa fvaffrdgpw tfipgelpfg ahgaalrmgt evgvlsigag mmvglritls
      241 mglgmvlawv lappalvaqg wvphqtfpev lrwvmwpatg lmvaggltal vlkwnviart
      301 fsklsakdvg sdeiplrwva wgaglsaval alvqklsldf pywltavsll lsiplmlvgi
      361 rvlgetnwap isalanlmqa vfaglqpghv pvnmigsgms gtvagqgehl mqcyrsgkii
      421 gsnnrslfym qlvgipvgaa avavvypalr qkygfgdhgl tspisvkwag faellakgfs
      481 tlpqgclaal cvalvlgvai tlleprwhrf lpsptalgig mlvpgyaivp mvlggiaqsv
      541 warrsprtea iynipvasgf iagealvlsi iaiaaavrsl sag
//
LOCUS       WP_235969542             651 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome c3 family protein [Anaeromyxobacter diazotrophicus].
ACCESSION   WP_235969542
VERSION     WP_235969542.1
KEYWORDS    RefSeq.
SOURCE      Anaeromyxobacter diazotrophicus
  ORGANISM  Anaeromyxobacter diazotrophicus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.
REFERENCE   1  (residues 1 to 651)
  AUTHORS   Matias,P.M., Coelho,A.V., Valente,F.M., Placido,D., LeGall,J.,
            Xavier,A.V., Pereira,I.A. and Carrondo,M.A.
  TITLE     Sulfate respiration in Desulfovibrio vulgaris Hildenborough.
            Structure of the 16-heme cytochrome c HmcA AT 2.5-A resolution and
            a view of its role in transmembrane electron transfer
  JOURNAL   J Biol Chem 277 (49), 47907-47916 (2002)
   PUBMED   12356749
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09699.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Anaeromyxobacter diazotrophicus"
                     /db_xref="taxon:2590199"
     Protein         1..651
                     /product="cytochrome c3 family protein"
                     /calculated_mol_wt=69424
     Region          <38..211
                     /region_name="decahem_SO"
                     /note="decaheme c-type cytochrome, DmsE family; TIGR03508"
                     /db_xref="CDD:274618"
     Region          226..266
                     /region_name="Cytochrom_C3"
                     /note="Heme-binding domain of the class III cytochrome C
                     family and related proteins; cl23752"
                     /db_xref="CDD:474044"
     Region          253..482
                     /region_name="decahem_SO"
                     /note="decaheme c-type cytochrome, DmsE family; TIGR03508"
                     /db_xref="CDD:274618"
     Region          512..552
                     /region_name="Paired_CXXCH_1"
                     /note="Doubled CXXCH motif (Paired_CXXCH_1); pfam09699"
                     /db_xref="CDD:462851"
     Region          560..598
                     /region_name="Paired_CXXCH_1"
                     /note="Doubled CXXCH motif (Paired_CXXCH_1); pfam09699"
                     /db_xref="CDD:462851"
ORIGIN      
        1 mtwtmrrwtt llglaaaall aaapgaaaaq ramkgkdcte chkkfnekyg sakfvhgavk
       61 qkrcedchlr hgivpklalk qpgnqlcyac hakqtigmdk pnvhpvlrng nctkchdahg
      121 snqphmlraa gneacyechk rapfeqkvvh pvlakegcka chlahasaqk allvaapnql
      181 cvkchdagkg nfkkahgdyp vatkscttch aphsssepkl lraslhnpvs sgscdachqp
      241 atspkpfavt eqggklcasc hddaalangg tvlhapfkkg eclschdpha sdsaklvraa
      301 gdqlclrchk kmaepvavkh kplatggcas chkphaskak slldteatal caschaktvq
      361 qkrktvhqpf akgaciachd phgsnfsama karvdrvcyg chqdaetrfi kththkpvld
      421 glcdschsgh gsdnpkllra tgaqlcqqch gelmkdpgsg snhppfakgd clgchdahgt
      481 natgmlvtdq kavclkchak qgqeaagaks lhaafdagdc skchsphksa lkslllagsp
      541 dlclschkqm keklaaekph qpvddcltch kphsstepwl ttqpvaelcs qchdfkakef
      601 aaahlsidpq rvrcvschdp haskdpkffk amvhapfaar qcdachlanp k
//
LOCUS       WP_235969732             357 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein
            [Anaeromyxobacter diazotrophicus].
ACCESSION   WP_235969732
VERSION     WP_235969732.1
KEYWORDS    RefSeq.
SOURCE      Anaeromyxobacter diazotrophicus
  ORGANISM  Anaeromyxobacter diazotrophicus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.
REFERENCE   1  (residues 1 to 357)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Anaeromyxobacter diazotrophicus"
                     /db_xref="taxon:2590199"
     Protein         1..357
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /calculated_mol_wt=37698
     Region          <25..314
                     /region_name="FtsI"
                     /note="Cell division protein FtsI, peptidoglycan
                     transpeptidase (Penicillin-binding protein 2) [Cell cycle
                     control, cell division, chromosome partitioning, Cell
                     wall/membrane/envelope biogenesis]; COG0768"
                     /db_xref="CDD:440531"
ORIGIN      
        1 mlgamtydpr lgrytapyga grasltispr lqqgleklla dyrvpvgaav llepgtgrvl
       61 alaehserga rgrvalspva paasvfkivt saallekglt peqevcfhgg rhriqkalls
      121 dnprrdrvcl tlasalgksa nvvfakmagr elsadllrae agkllfdaai pfdwpvepsp
      181 ahisddpfef attaagfgpv klsplhgall aaivanggkf vaprvvdave ggaapapage
      241 ravlrpevaa alarmmattt tegtarkifr rdrasrrspl revsvagktg sladanpykd
      301 yswfvgfapv ddpqvavaav vvnerlwrik aslvahealk ayfeaeggrv vrtarar
//
LOCUS       WP_235969824             426 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Pedobacter planticolens].
ACCESSION   WP_235969824
VERSION     WP_235969824.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter planticolens
  ORGANISM  Pedobacter planticolens
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Pedobacter planticolens"
                     /db_xref="taxon:2679964"
     Protein         1..426
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=47700
     Region          4..420
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 midlkvvhln tydgnggagr aclrlsdalk angvdskvlv yykfghnpki dtfsknifan
       61 araifnimae rylaklfvka vktpfslqwf gksivnhpel ksadiihlhw vnhgflspkf
      121 laeldelekp ivwtfhdsna ftggchvrys cehfhkqcgd cpilrlsgkd dishknwlrk
      181 qkayselnfh ivapsnwman svkqssllgv rkisvipntl eidvfkpyvk aeakkilkip
      241 ahhfvlmsgf mpskndkhkg tqylidalne laarpeipne qielvifgnk deknapdfpf
      301 kttflghisk ddhlakcyaa adafitpsle dnlpntvmes lacatpviaf ktggipdmvi
      361 hlqngylany esstdladgi ewlflhedaa avqkearrti lnhfapalia deheelyqsl
      421 lnalpq
//
LOCUS       WP_235969839             452 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Pedobacter planticolens].
ACCESSION   WP_235969839
VERSION     WP_235969839.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter planticolens
  ORGANISM  Pedobacter planticolens
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
REFERENCE   1  (residues 1 to 452)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Pedobacter planticolens"
                     /db_xref="taxon:2679964"
     Protein         1..452
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=50225
     Region          29..373
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     Region          <368..>443
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
ORIGIN      
        1 mikmkylgll lavilfsens faqktitrda nistmvneva stnleqtikk lvsfqtrhtl
       61 sdtlskttgi gaartwikse fekygaaggg rlqvsydtft qaadgrrita pvvlknvlav
      121 lpgtdpndkr mllvsghyds rvtdvmnikd fapganddas gvaammemcr vmskqkfnct
      181 lvfvamvgee qglygatnla krakeegwnv hllmnndivg nsygmetdlk dnksvrvfse
      241 gvsaletpaq aaarqsagte ndgkarqaar yikevaeryv dqlevkliyr rdrylrggdh
      301 tpfsqqgfaa vritemnedf nrqhqdvrte ngfkygdlpe yvdynylqkv trmnlsvman
      361 lglstqepen vvvltsgltn ktslkwdapk gkspagyyvl mrettspfwe qkffvkenaa
      421 tlsyskdnyy fgvqsvdeng heslvvipka gr
//
LOCUS       WP_235969948             326 aa            linear   BCT 02-MAR-2025
DEFINITION  pseudouridine synthase [Corynebacterium wankanglinii].
ACCESSION   WP_235969948
VERSION     WP_235969948.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium wankanglinii
  ORGANISM  Corynebacterium wankanglinii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (residues 1 to 326)
  AUTHORS   Wrzesinski,J., Nurse,K., Bakin,A., Lane,B.G. and Ofengand,J.
  TITLE     A dual-specificity pseudouridine synthase: an Escherichia coli
            synthase purified and cloned on the basis of its specificity for
            psi 746 in 23S RNA is also specific for psi 32 in tRNA(phe)
  JOURNAL   RNA 1 (4), 437-448 (1995)
   PUBMED   7493321
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013045.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00849.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Corynebacterium wankanglinii"
                     /db_xref="taxon:2735136"
     Protein         1..326
                     /product="pseudouridine synthase"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /GO_process="GO:0001522 - pseudouridine synthesis
                     [Evidence IEA]"
                     /GO_process="GO:0009451 - RNA modification [Evidence IEA]"
                     /calculated_mol_wt=35974
     Region          63..318
                     /region_name="PseudoU_synth"
                     /note="Pseudouridine synthases catalyze the isomerization
                     of specific uridines in an RNA molecule to pseudouridines
                     (5-ribosyluracil, psi); cl00130"
                     /db_xref="CDD:469624"
     Site            order(149..152,266)
                     /site_type="active"
                     /db_xref="CDD:211324"
ORIGIN      
        1 markknhktg plpprnglga trarvpdges ipavdfiwhl vstqrhrhpd dtvdavlqrf
       61 aeggvvkrdg taltaetlla pgtdvyfyrr papelpvpia ittvfedddi lvvdkppfla
      121 tmprashite tatvrlrrat gneeltpahr ldratsglll ltkrrdirga yqelfarrev
      181 rkeyeaiapl hdvppatpwh hhltkqpgep aarvvpdaep nsrtvvagvs rlprtaeael
      241 qarygvsspl aryalqpetg rthqlrvqmm qeaapilgdr iypkllpagg edfstpmllr
      301 ctllgftdpl tgaprefrls gnwpsl
//
LOCUS       WP_235969966             253 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Corynebacterium wankanglinii].
ACCESSION   WP_235969966
VERSION     WP_235969966.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium wankanglinii
  ORGANISM  Corynebacterium wankanglinii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (residues 1 to 253)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Corynebacterium wankanglinii"
                     /db_xref="taxon:2735136"
     Protein         1..253
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=26418
     Region          12..252
                     /region_name="protocat_pcaD"
                     /note="3-oxoadipate enol-lactonase; TIGR02427"
                     /db_xref="CDD:131480"
ORIGIN      
        1 mtflrthefg spdgpavvll ssiattheaw sevipalsgy rvitvdhrgh ggsgvpeedp
       61 egvgtlgrdv laaldelgvd rftvvgislg gaiaqwlaan skrvdkavfa atatflggek
      121 awaektrval hdgtsgltps lmgnwftnaf renhpevver vaamidsvdd qgyaqngral
      181 atwdfadelg aitcpvltia gasdptcppe kleeiaagvs gpshsvvidp aahqvaiehp
      241 eafvsaltqf lae
//
LOCUS       WP_235969572              93 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome c3 family protein [Anaeromyxobacter diazotrophicus].
ACCESSION   WP_235969572
VERSION     WP_235969572.1
KEYWORDS    RefSeq.
SOURCE      Anaeromyxobacter diazotrophicus
  ORGANISM  Anaeromyxobacter diazotrophicus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.
REFERENCE   1  (residues 1 to 93)
  AUTHORS   Matias,P.M., Morais,J., Coelho,R., Carrondo,M.A., Wilson,K.,
            Dauter,Z. and Sieker,L.
  TITLE     Cytochrome c3 from Desulfovibrio gigas: crystal structure at 1.8 A
            resolution and evidence for a specific calcium-binding site
  JOURNAL   Protein Sci 5 (7), 1342-1354 (1996)
   PUBMED   8819167
REFERENCE   2  (residues 1 to 93)
  AUTHORS   Shinkai,W., Hase,T., Yagi,T. and Matsubara,H.
  TITLE     Amino acid sequence of cytochrome c3 from Desulfovibrio vulgaris,
            Miyazaki
  JOURNAL   J Biochem 87 (6), 1747-1756 (1980)
   PUBMED   6249799
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014176.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02085.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Anaeromyxobacter diazotrophicus"
                     /db_xref="taxon:2590199"
     Protein         1..93
                     /product="cytochrome c3 family protein"
                     /GO_function="GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=9877
     Region          <25..>89
                     /region_name="PRK14300"
                     /note="chaperone protein DnaJ; Provisional"
                     /db_xref="CDD:172788"
ORIGIN      
        1 mltvalavsl faapvlaaep pkepitlksa kqgditfkhe qhkavkceec hgagepgkma
       61 mdmkkghavc qachkkqenk algkcdtchk kak
//
LOCUS       WP_235969771             236 aa            linear   BCT 02-MAR-2025
DEFINITION  VIT1/CCC1 transporter family protein [Pedobacter planticolens].
ACCESSION   WP_235969771
VERSION     WP_235969771.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter planticolens
  ORGANISM  Pedobacter planticolens
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
REFERENCE   1  (residues 1 to 236)
  AUTHORS   Fu,D., Beeler,T. and Dunn,T.
  TITLE     Sequence, mapping and disruption of CCC1, a gene that
            cross-complements the Ca(2+)-sensitive phenotype of csg1 mutants
  JOURNAL   Yeast 10 (4), 515-521 (1994)
   PUBMED   7941738
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014090.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01988.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Pedobacter planticolens"
                     /db_xref="taxon:2679964"
     Protein         1..236
                     /product="VIT1/CCC1 transporter family protein"
                     /GO_function="GO:0005384 - manganese ion transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0030026 - intracellular manganese ion
                     homeostasis [Evidence IEA]"
                     /calculated_mol_wt=25444
     Region          4..235
                     /region_name="CCC1_like"
                     /note="CCC1-related family of proteins; cl00278"
                     /db_xref="CDD:469703"
ORIGIN      
        1 mskqdhfmgh hqeehlkssd fitdvvigms dgltvpfala aglssavsnn siiitagiae
       61 ivagciamgl ggylagkteq ehyqselkre ynevehipek emqevkdifa gygiseqgqd
      121 vlakelsqdk tkwvefmmkf elgleepnpn rarnsaltig iayfiggllp lsayfftktp
      181 englivsaif ttlclfifgy fkskvtaqpp imgalkvtmi gliaaaaafg iaklvg
//
LOCUS       WP_235970970             418 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Azohydromonas caseinilytica].
ACCESSION   WP_235970970
VERSION     WP_235970970.1
KEYWORDS    RefSeq.
SOURCE      Azohydromonas caseinilytica
  ORGANISM  Azohydromonas caseinilytica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Sphaerotilaceae; Azohydromonas.
REFERENCE   1  (residues 1 to 418)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Azohydromonas caseinilytica"
                     /db_xref="taxon:2728836"
     Protein         1..418
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=45749
     Region          2..243
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(42..43,46..47,50,53..54,56..57,60,63..64,67,70..71,
                     74..75,78,81..82,84..85,89,91,92,95,98..99,102,106,109,
                     116,120,123,126..127,130,133..134,137..138,140..141,
                     144..145,158..159,165,168..169,172,176..177,179..180,
                     183..184,187,190..191,194,197..198,200..201,204..205,
                     207..208,211,214..215)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            98..131
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 msaqasnvgr daaevrgame dtqkivhaqg qamqqlaaql vevqtaqgsi adatletlqa
       61 vararealqs vsrevqgive tlhqvadaag eitqialqtr lvafnasvea krageagrgf
      121 gvvadavkdl agkvettska imttvtqldd ridnfsrdlr fddkagtrsr savhvafasv
      181 eqdverisla aeqsrrtcsq lndytqeles evqqakarlt talacsdrfl kvseamieqv
      241 agfgvetadt pfiqaaqqaa qeiadlleqa vrsgnlqlqd lfdenyrsip ntnppqylar
      301 fvevadrlfp qvqervlglt prvsyciavd rngycpthnk kysqpqrgdl awdtansryr
      361 rifndrtgla sarnkrpfll qtyrrdmggg qfvilkeasa pivvsgrhwg glrvgfnf
//
LOCUS       WP_235971000              60 aa            linear   BCT 02-MAR-2025
DEFINITION  NepR family anti-sigma factor [Palleronia pontilimi].
ACCESSION   WP_235971000
VERSION     WP_235971000.1
KEYWORDS    RefSeq.
SOURCE      Palleronia pontilimi
  ORGANISM  Palleronia pontilimi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Palleronia.
REFERENCE   1  (residues 1 to 60)
  AUTHORS   Campagne,S., Damberger,F.F., Kaczmarczyk,A., Francez-Charlot,A.,
            Allain,F.H. and Vorholt,J.A.
  TITLE     Structural basis for sigma factor mimicry in the general stress
            response of Alphaproteobacteria
  JOURNAL   Proc Natl Acad Sci U S A 109 (21), E1405-E1414 (2012)
   PUBMED   22550171
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037848.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18557.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..60
                     /organism="Palleronia pontilimi"
                     /db_xref="taxon:1964209"
     Protein         1..60
                     /product="NepR family anti-sigma factor"
                     /GO_function="GO:0016989 - sigma factor antagonist
                     activity [Evidence IEA]"
                     /calculated_mol_wt=6979
     Region          12..43
                     /region_name="NepR"
                     /note="Anti-sigma factor NepR; pfam18557"
                     /db_xref="CDD:465800"
ORIGIN      
        1 masndksanl mrqidenlrr vyrqdeeadv pdrfqkllqq lkereakgea edreqdsade
//
LOCUS       WP_235971056             395 aa            linear   BCT 02-MAR-2025
DEFINITION  FIST N-terminal domain-containing protein [Palleronia pontilimi].
ACCESSION   WP_235971056
VERSION     WP_235971056.1
KEYWORDS    RefSeq.
SOURCE      Palleronia pontilimi
  ORGANISM  Palleronia pontilimi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Palleronia.
REFERENCE   1  (residues 1 to 395)
  AUTHORS   Borziak,K. and Zhulin,I.B.
  TITLE     FIST: a sensory domain for diverse signal transduction pathways in
            prokaryotes and ubiquitin signaling in eukaryotes
  JOURNAL   Bioinformatics 23 (19), 2518-2521 (2007)
   PUBMED   17855421
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020084.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08495.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Palleronia pontilimi"
                     /db_xref="taxon:1964209"
     Protein         1..395
                     /product="FIST N-terminal domain-containing protein"
                     /calculated_mol_wt=42171
     Region          31..388
                     /region_name="NosP"
                     /note="nitric oxide-sensing protein NosP; NF041558"
                     /db_xref="CDD:469443"
ORIGIN      
        1 mtkiditrap mptadgrapa hlirnatvpc dlddpigalk dqlgpgpfaq vfffvspacd
       61 faalslrard afpgtstlla stagelgpeg yaeatiiava lpqahfrcrt laiapldgld
      121 pdglsghlvs ermalstdhp dlpggfafll vdglsmredt llsailpglg tlplfggstg
      181 dgrrfrkthl aldgvvldqa avltlvatdc etrvfsldnl rpadtrmvvt gadperrlvt
      241 hinaapaare yarligkdpd qldeftfaah pvavqlgdrh hvraiqrvna agelhffsai
      301 eegmvlrvah addlpdhldr alsglsqdqp pgdilacdci lrriaaeqsq svravsdvls
      361 rhrvigfsty geqigpmhvn qtmtgvaiyp prtre
//
LOCUS       WP_235971071             384 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Azohydromonas caseinilytica].
ACCESSION   WP_235971071
VERSION     WP_235971071.1
KEYWORDS    RefSeq.
SOURCE      Azohydromonas caseinilytica
  ORGANISM  Azohydromonas caseinilytica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Sphaerotilaceae; Azohydromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Azohydromonas caseinilytica"
                     /db_xref="taxon:2728836"
     Protein         1..384
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=41402
     Region          20..374
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 msalpqdmga paasparplr vihfvtggfs gatqvaldlv raaldggtqa pllalrrkrq
       61 tplarvaqlq regvpvrlvp gwshaatvws larlcrelep dvlvchgfsd hlwgryagll
      121 agvpvlvhve hnsrerytrw rlaqahwlar rtaaivgcse gvrrqllalg fpaertlais
      181 ngirtapfad aelhpyaart pgivmaarfa rqkdhptllr alallrqrgl cpplllagqg
      241 srrhlqtaqa laqelgvqdq vrflghcpdv pgllmshqic vlsshyegmp lslvegmaag
      301 cavvgsavpg iqeliedgvt grlvahadap aladaleqll rdpaaaaala rrareevmhr
      361 yrledmtgay erlllslrpa aptr
//
LOCUS       WP_235971182             219 aa            linear   BCT 02-MAR-2025
DEFINITION  PAS domain-containing protein [Palleronia pontilimi].
ACCESSION   WP_235971182
VERSION     WP_235971182.1
KEYWORDS    RefSeq.
SOURCE      Palleronia pontilimi
  ORGANISM  Palleronia pontilimi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Palleronia.
REFERENCE   1  (residues 1 to 219)
  AUTHORS   Hefti,M.H., Francoijs,K.J., de Vries,S.C., Dixon,R. and Vervoort,J.
  TITLE     The PAS fold. A redefinition of the PAS domain based upon
            structural prediction
  JOURNAL   Eur J Biochem 271 (6), 1198-1208 (2004)
   PUBMED   15009198
REFERENCE   2  (residues 1 to 219)
  AUTHORS   Ponting,C.P. and Aravind,L.
  TITLE     PAS: a multifunctional domain family comes to light
  JOURNAL   Curr Biol 7 (11), R674-R677 (1997)
   PUBMED   9382818
REFERENCE   3  (residues 1 to 219)
  AUTHORS   Zhulin,I.B., Taylor,B.L. and Dixon,R.
  TITLE     PAS domain S-boxes in Archaea, Bacteria and sensors for oxygen and
            redox
  JOURNAL   Trends Biochem Sci 22 (9), 331-333 (1997)
   PUBMED   9301332
REFERENCE   4  (residues 1 to 219)
  AUTHORS   Borgstahl,G.E., Williams,D.R. and Getzoff,E.D.
  TITLE     1.4 A structure of photoactive yellow protein, a cytosolic
            photoreceptor: unusual fold, active site, and chromophore
  JOURNAL   Biochemistry 34 (19), 6278-6287 (1995)
   PUBMED   7756254
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020037.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08448.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Palleronia pontilimi"
                     /db_xref="taxon:1964209"
     Protein         1..219
                     /product="PAS domain-containing protein"
                     /calculated_mol_wt=24798
ORIGIN      
        1 mfiadahsdr hdrftlrain dahtqaskme raqvrdmeif sllpradaea indnyarclq
       61 rgrpmeysee ltingaitrw httlvptrse tgrsrvvgna vlverqparn ghrrvfedin
      121 yfsvqsqfql srvsayldal ehrcaqdvsc tdlsilsalc rtvdrtlqdi rklaepravd
      181 tidakptylm daqnlssrps adpvrrsler lssimsqah
//
LOCUS       WP_235971197             179 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6647 family protein [Palleronia pontilimi].
ACCESSION   WP_235971197
VERSION     WP_235971197.1
KEYWORDS    RefSeq.
SOURCE      Palleronia pontilimi
  ORGANISM  Palleronia pontilimi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Palleronia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042552.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20352.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Palleronia pontilimi"
                     /db_xref="taxon:1964209"
     Protein         1..179
                     /product="DUF6647 family protein"
                     /calculated_mol_wt=20093
     Region          6..179
                     /region_name="DUF6647"
                     /note="Family of unknown function (DUF6647); pfam20352"
                     /db_xref="CDD:466502"
ORIGIN      
        1 mmyrsrlava latalialcp tlahaesasr lpapgwqhad smvtlvssld dwldartdwp
       61 rrdavprvrl vsewqaaarq gltasfqrgr lrglydpdls eillvqpwdp rnpvdvavll
      121 helthhrqap hhwycpaaqe lsayrlqerw lsekglaldv nwmavvldag csprdihpe
//
LOCUS       WP_235970958             268 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Azohydromonas caseinilytica].
ACCESSION   WP_235970958
VERSION     WP_235970958.1
KEYWORDS    RefSeq.
SOURCE      Azohydromonas caseinilytica
  ORGANISM  Azohydromonas caseinilytica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Sphaerotilaceae; Azohydromonas.
REFERENCE   1  (residues 1 to 268)
  AUTHORS   Ronning,D.R., Guynet,C., Ton-Hoang,B., Perez,Z.N., Ghirlando,R.,
            Chandler,M. and Dyda,F.
  TITLE     Active site sharing and subterminal hairpin recognition in a new
            class of DNA transposases
  JOURNAL   Mol Cell 20 (1), 143-154 (2005)
   PUBMED   16209952
REFERENCE   2  (residues 1 to 268)
  AUTHORS   Brynestad,S., Synstad,B. and Granum,P.E.
  TITLE     The Clostridium perfringens enterotoxin gene is on a transposable
            element in type A human food poisoning strains
  JOURNAL   Microbiology (Reading) 143 (Pt 7), 2109-2115 (1997)
   PUBMED   9245800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013921.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01797.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Azohydromonas caseinilytica"
                     /db_xref="taxon:2728836"
     Protein         1..268
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=29369
     Region          1..138
                     /region_name="RAYT"
                     /note="REP element-mobilizing transposase RayT [Mobilome:
                     prophages, transposons]; COG1943"
                     /db_xref="CDD:441546"
ORIGIN      
        1 marlprlala ghlhhlvlrg nagqalfvdd edrqrcleml realrlhgva lhgyvlleds
       61 lqllltpdsd aglsaamqal grryvaafnr rhgrsgtlwe gryratvaqp qrhfialltl
      121 vewqpqrrgl casalewpws saahhlgrrr dplvtdhplf watgntpfer elahrarlea
      181 glpepqaltl mdatlkgwal gdaaflaala ahterplqpr prgrprktpi pdtpqadatp
      241 asatrprpta aapgaanslk qlgkqapk
//
LOCUS       WP_235971366             268 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease [Palleronia pontilimi].
ACCESSION   WP_235971366
VERSION     WP_235971366.1
KEYWORDS    RefSeq.
SOURCE      Palleronia pontilimi
  ORGANISM  Palleronia pontilimi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Palleronia.
REFERENCE   1  (residues 1 to 268)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01061.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Palleronia pontilimi"
                     /db_xref="taxon:1964209"
     Protein         1..268
                     /product="ABC transporter permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=28059
     Region          17..268
                     /region_name="ABC2_membrane"
                     /note="ABC-2 type transporter; cl21474"
                     /db_xref="CDD:473876"
ORIGIN      
        1 maqdstemgv rrfgawnttg lftlaerecr rfmaiwsqti mgplinagll lavfaiaigp
       61 argdimgvsy vefiapgilm mtviqnsfan tsssllaakv qgnivdtlmp plspaelllg
      121 ylaggiarga lvavvigavm vtvlgtgmah plfflafvll gglmmgalgi lagivankfd
      181 qmsaitnfii tplsflsgtf ysiealpsal ttaahfdpff ylidgarygt lgvsdaspwl
      241 glavvagvta alcalalywf skgyrlks
//
LOCUS       WP_235971402             374 aa            linear   BCT 02-MAR-2025
DEFINITION  PEP-CTERM sorting domain-containing protein [Azohydromonas
            caseinilytica].
ACCESSION   WP_235971402
VERSION     WP_235971402.1
KEYWORDS    RefSeq.
SOURCE      Azohydromonas caseinilytica
  ORGANISM  Azohydromonas caseinilytica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Sphaerotilaceae; Azohydromonas.
REFERENCE   1  (residues 1 to 374)
  AUTHORS   Haft,D.H., Paulsen,I.T., Ward,N. and Selengut,J.D.
  TITLE     Exopolysaccharide-associated protein sorting in environmental
            organisms: the PEP-CTERM/EpsH system. Application of a novel
            phylogenetic profiling heuristic
  JOURNAL   BMC Biol 4, 29 (2006)
   PUBMED   16930487
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019225.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07589.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Azohydromonas caseinilytica"
                     /db_xref="taxon:2728836"
     Protein         1..374
                     /product="PEP-CTERM sorting domain-containing protein"
                     /calculated_mol_wt=40143
     Region          89..338
                     /region_name="COG5563"
                     /note="Uncharacterized conserved protein CPn0794, contains
                     PKD-like HAF repeats [Function unknown]"
                     /db_xref="CDD:444305"
     Region          <340..370
                     /region_name="PEP_CTERM_FxDxF"
                     /note="FxDxF family PEP-CTERM protein; NF038126"
                     /db_xref="CDD:468369"
ORIGIN      
        1 mknlhvrlaa lalamsagla aqaaqpqyrv qnlssqwpsg rmwgsvglnn egtvfgslqe
       61 dagrpgqpfl vhhgttkllg aldgpwaiar aindrgeltg iaasqgsgaw rpflyrraem
      121 veiptppggr yaqgldinsa gqvlgvagps lqeafsrpfi ydgtrtrfld lpegyslerl
      181 ndrgqmlgta fdartgitrp flyedgritl lpllqdapmp qeravlrgid fnnagqvlvr
      241 ltdradltgr nvssylysdg aytrigpags feavdinrkg wvtgtltapd wsghrpalyr
      301 dgrlldlndl lvpagarnge lrsalalndr gqilgtgnrg hylatpvpep atpalmlagl
      361 aivgtvlrrr savr
//
LOCUS       WP_235971449             851 aa            linear   BCT 02-MAR-2025
DEFINITION  catalase [Azohydromonas caseinilytica].
ACCESSION   WP_235971449
VERSION     WP_235971449.1
KEYWORDS    RefSeq.
SOURCE      Azohydromonas caseinilytica
  ORGANISM  Azohydromonas caseinilytica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Sphaerotilaceae; Azohydromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012425.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00199.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Azohydromonas caseinilytica"
                     /db_xref="taxon:2728836"
     Protein         1..851
                     /product="catalase"
                     /EC_number="1.11.1.6"
                     /GO_function="GO:0004096 - catalase activity [Evidence
                     IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=91682
     Region          113..845
                     /region_name="katE"
                     /note="hydroperoxidase II; Provisional; PRK11249"
                     /db_xref="CDD:236886"
ORIGIN      
        1 matrktpaaq spsesgksgg akkaatkaag sasvkqsmgg psvkttgart rrslleraat
       61 algsgtssdn aavrnlatad rleakydate alsaslphnp tkpaeyvqgg qvtpapegah
      121 aapdnldata stisedntsd kngskatpgt npnngplqrh ridsggrait tnqgvpvadn
      181 qhslrlgerg ptlledfilr ekithfdher ipervvharg sgahgyfect editaltkaa
      241 pfakvgkrtp vfvrfstvag ergsadavrd vrgfavkfyt degnwdlvgn nipvffiqda
      301 mkfpdvvhav kpephhqmpq assahdtfwd fislspesah mvmwqmsdra iprsyrtmqg
      361 fgvhtfrfin aegaatlvkf hwtpllgths ldwdeavkin gadpdfhrrd lweaieggaf
      421 peyllqiqtf teeqaaqwsf dvldatkivp eelvplrtvg rmvldrnpdy ffgeteqvaf
      481 ctqhvvpgid ftndpllqgr nfsyldtqit rlggpnfhli pinapvaevh nnqrdgfhqh
      541 gifrgrvnye pnslaggcpf qagargfssf aerllaqqat aeptklrakp ekfadhytqa
      601 rlfyasqtpv eqyhiaralr feltrvqtqa vrarvvamlr nideglaatv ardlgmalpe
      661 plpmarapve apevavspal slaarpgdgr ilarriallv gdgvdgaale svyqalvqag
      721 avpryvgarl gvvqtssgda lpvevtieaa psvlfdaaml ppgagaaatm aadglalefv
      781 qqqyrhckpl lvpigaalll eaagvttlpe dggdpgllfv pddqlagage efirrialhr
      841 awqrqteppl v
//
LOCUS       WP_235971579             160 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6915 family protein [Palleronia pontilimi].
ACCESSION   WP_235971579
VERSION     WP_235971579.1
KEYWORDS    RefSeq.
SOURCE      Palleronia pontilimi
  ORGANISM  Palleronia pontilimi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Palleronia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046526.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21866.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Palleronia pontilimi"
                     /db_xref="taxon:1964209"
     Protein         1..160
                     /product="DUF6915 family protein"
                     /calculated_mol_wt=17622
ORIGIN      
        1 mghpyhhals sarrfggvpe dyidlhawfd esksqtadfr hralrhhaeg ifmlerffda
       61 titastgrvv pvrligeqhv iedlgfipsf adwvrcirpe pwmgraqpih rivdpfaasd
      121 grstepkvaq rqaiggarsm adaassgddt avtafvkgdn
//
LOCUS       WP_235971861             103 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3135 domain-containing protein [Azohydromonas caseinilytica].
ACCESSION   WP_235971861
VERSION     WP_235971861.1
KEYWORDS    RefSeq.
SOURCE      Azohydromonas caseinilytica
  ORGANISM  Azohydromonas caseinilytica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Sphaerotilaceae; Azohydromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022777.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11333.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Azohydromonas caseinilytica"
                     /db_xref="taxon:2728836"
     Protein         1..103
                     /product="DUF3135 domain-containing protein"
                     /calculated_mol_wt=11113
     Region          5..88
                     /region_name="DUF3135"
                     /note="Protein of unknown function (DUF3135); pfam11333"
                     /db_xref="CDD:431821"
ORIGIN      
        1 mppsfdfdhf arlaqedpva fetqrhalle aafdelpaal qasarasfaq vqvrmlaaks
       61 paerlaisla alndalqdlq qgfaalrrea vqqsryssrs taa
//
LOCUS       WP_235971648             132 aa            linear   BCT 02-MAR-2025
DEFINITION  phasin family protein [Azohydromonas caseinilytica].
ACCESSION   WP_235971648
VERSION     WP_235971648.1
KEYWORDS    RefSeq.
SOURCE      Azohydromonas caseinilytica
  ORGANISM  Azohydromonas caseinilytica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Sphaerotilaceae; Azohydromonas.
REFERENCE   1  (residues 1 to 132)
  AUTHORS   Matsumoto,K., Matsusaki,H., Taguchi,K., Seki,M. and Doi,Y.
  TITLE     Isolation and characterization of polyhydroxyalkanoates inclusions
            and their associated proteins in Pseudomonas sp. 61-3
  JOURNAL   Biomacromolecules 3 (4), 787-792 (2002)
   PUBMED   12099824
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017415.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05597.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Azohydromonas caseinilytica"
                     /db_xref="taxon:2728836"
     Protein         1..132
                     /product="phasin family protein"
                     /calculated_mol_wt=13793
     Region          4..115
                     /region_name="Phasin"
                     /note="Poly(hydroxyalcanoate) granule associated protein
                     (phasin); cl07863"
                     /db_xref="CDD:447545"
ORIGIN      
        1 maakqsgarl vqaighsgqe iwlagvgaly tarkegsrlf ellveegkac tsaltgggae
       61 qvrarlgggl gglqrglekr varalqsvgv psaqevgels rrvaeldrhv saltrrsras
      121 ggvkrvkrki rp
//
LOCUS       WP_235971930              89 aa            linear   BCT 02-MAR-2025
DEFINITION  type II toxin-antitoxin system CcdA family antitoxin [Aquariibacter
            albus].
ACCESSION   WP_235971930
VERSION     WP_235971930.1
KEYWORDS    RefSeq.
SOURCE      Aquariibacter albus
  ORGANISM  Aquariibacter albus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Sphaerotilaceae; Aquariibacter.
REFERENCE   1  (residues 1 to 89)
  AUTHORS   Bahassi,E.M., O'Dea,M.H., Allali,N., Messens,J., Gellert,M. and
            Couturier,M.
  TITLE     Interactions of CcdB with DNA gyrase. Inactivation of Gyra,
            poisoning of the gyrase-DNA complex, and the antidote action of
            CcdA
  JOURNAL   J Biol Chem 274 (16), 10936-10944 (1999)
   PUBMED   10196173
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019009.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07362.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Aquariibacter albus"
                     /db_xref="taxon:2759899"
     Protein         1..89
                     /product="type II toxin-antitoxin system CcdA family
                     antitoxin"
                     /calculated_mol_wt=9808
     Region          1..81
                     /region_name="COG5302"
                     /note="Post-segregation antitoxin (ccd killing mechanism
                     protein) encoded by the F plasmid [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:444102"
ORIGIN      
        1 mqatkppsps krpvnlslda qlverakalg mnvsgtveal laaevervyw qrwnddnrea
       61 iahynarvar eglplvrhrs fargvsdea
//
LOCUS       WP_235971952             216 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Aquariibacter albus].
ACCESSION   WP_235971952
VERSION     WP_235971952.1
KEYWORDS    RefSeq.
SOURCE      Aquariibacter albus
  ORGANISM  Aquariibacter albus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Sphaerotilaceae; Aquariibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14559.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Aquariibacter albus"
                     /db_xref="taxon:2759899"
     Protein         1..216
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=23395
     Region          6..>191
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          117..154
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          159..187
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mqrrsalrha laaslfalsl vpglaraadt ladiqqswev iryqtparqr ekafeqlaer
       61 ahqlreaqpg rpepliwegi vlsswagekg glgalglvkq arglyeqaia idaraldgsa
      121 laslgvlyak vpgwpigfgd karakellqq alkinpqgid pnffyaella dqgqnaeals
      181 hlekalqapp rparqiadtg rreeikalmg klqaar
//
LOCUS       WP_235972030             240 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Limosilactobacillus urinaemulieris].
ACCESSION   WP_235972030
VERSION     WP_235972030.1
KEYWORDS    RefSeq.
SOURCE      Limosilactobacillus urinaemulieris
  ORGANISM  Limosilactobacillus urinaemulieris
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Limosilactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025124.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13749.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Limosilactobacillus urinaemulieris"
                     /db_xref="taxon:2742600"
     Protein         1..240
                     /product="ATP-binding protein"
                     /calculated_mol_wt=27750
     Region          62..147
                     /region_name="HATPase_c_4"
                     /note="Putative ATP-dependent DNA helicase recG
                     C-terminal; pfam13749"
                     /db_xref="CDD:463975"
ORIGIN      
        1 miegplpkvi eqadnivksq lreftslnve tdkfetvpey pkgtwlegiv navthraynl
       61 ngddiriimy ddriiihspg dlpsivtvdn irtthysrnp niaralvqfg wvrefgesvd
      121 rmyknmeeyf lddpeyvatn ayteltlrnn ivmrnsrrke eiskitnydf tkltyperaa
      181 liyayehkel rpkefissns klhpstarka lsdltklell erhaasptsp ntyytlktqk
//
LOCUS       WP_235972104             156 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Limosilactobacillus urinaemulieris].
ACCESSION   WP_235972104
VERSION     WP_235972104.1
KEYWORDS    RefSeq.
SOURCE      Limosilactobacillus urinaemulieris
  ORGANISM  Limosilactobacillus urinaemulieris
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Limosilactobacillus.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Vertes,A.A., Inui,M., Kobayashi,M., Kurusu,Y. and Yukawa,H.
  TITLE     Isolation and characterization of IS31831, a transposable element
            from Corynebacterium glutamicum
  JOURNAL   Mol Microbiol 11 (4), 739-746 (1994)
   PUBMED   8196545
REFERENCE   2  (residues 1 to 156)
  AUTHORS   van der Zee,A., Agterberg,C., van Agterveld,M., Peeters,M. and
            Mooi,F.R.
  TITLE     Characterization of IS1001, an insertion sequence element of
            Bordetella parapertussis
  JOURNAL   J Bacteriol 175 (1), 141-147 (1993)
   PUBMED   8093238
REFERENCE   3  (residues 1 to 156)
  AUTHORS   Johansen,E. and Kibenich,A.
  TITLE     Isolation and characterization of IS1165, an insertion sequence of
            Leuconostoc mesenteroides subsp. cremoris and other lactic acid
            bacteria
  JOURNAL   Plasmid 27 (3), 200-206 (1992)
   PUBMED   1325060
REFERENCE   4  (residues 1 to 156)
  AUTHORS   Cirillo,J.D., Barletta,R.G., Bloom,B.R. and Jacobs,W.R. Jr.
  TITLE     A novel transposon trap for mycobacteria: isolation and
            characterization of IS1096
  JOURNAL   J Bacteriol 173 (24), 7772-7780 (1991)
   PUBMED   1660454
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013753.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01610.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Limosilactobacillus urinaemulieris"
                     /db_xref="taxon:2742600"
     Protein         1..156
                     /product="transposase"
                     /calculated_mol_wt=18816
     Region          <5..156
                     /region_name="transpos_ISL3"
                     /note="ISL3 family transposase; NF033550"
                     /db_xref="CDD:468079"
ORIGIN      
        1 mplvkgveti tidlnsyyqd ivyqlfsntk iiidrfhiia mitrafnqyr sqwmkrykyq
       61 sreykllkff wrlylkndha ltdnneyydr hihqkvktne rislglelda klnndyvvmn
      121 dlatrnkdtl aetlynyhyd qlskpmatvi khyaei
//
LOCUS       WP_235972109             441 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Limosilactobacillus urinaemulieris].
ACCESSION   WP_235972109
VERSION     WP_235972109.1
KEYWORDS    RefSeq.
SOURCE      Limosilactobacillus urinaemulieris
  ORGANISM  Limosilactobacillus urinaemulieris
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Limosilactobacillus.
REFERENCE   1  (residues 1 to 441)
  AUTHORS   Davies,D.R., Mahnke Braam,L., Reznikoff,W.S. and Rayment,I.
  TITLE     The three-dimensional structure of a Tn5 transposase-related
            protein determined to 2.9-A resolution
  JOURNAL   J Biol Chem 274 (17), 11904-11913 (1999)
   PUBMED   10207011
REFERENCE   2  (residues 1 to 441)
  AUTHORS   DasSarma,S.
  TITLE     Identification and analysis of the gas vesicle gene cluster on an
            unstable plasmid of Halobacterium halobium
  JOURNAL   Experientia 49 (6-7), 482-486 (1993)
   PUBMED   8335077
REFERENCE   3  (residues 1 to 441)
  AUTHORS   Ferrante,A.A. and Lessie,T.G.
  TITLE     Nucleotide sequence of IS402 from Pseudomonas cepacia
  JOURNAL   Gene 102 (1), 143-144 (1991)
   PUBMED   1650732
REFERENCE   4  (residues 1 to 441)
  AUTHORS   De Meirsman,C., Van Soom,C., Verreth,C., Van Gool,A. and
            Vanderleyden,J.
  TITLE     Nucleotide sequence analysis of IS427 and its target sites in
            Agrobacterium tumefaciens T37
  JOURNAL   Plasmid 24 (3), 227-234 (1990)
   PUBMED   1963949
REFERENCE   5  (residues 1 to 441)
  AUTHORS   Sato,S., Nakada,Y. and Shiratsuchi,A.
  TITLE     IS421, a new insertion sequence in Escherichia coli
  JOURNAL   FEBS Lett 249 (1), 21-26 (1989)
   PUBMED   2542093
REFERENCE   6  (residues 1 to 441)
  AUTHORS   Kroger,M. and Hobom,G.
  TITLE     Structural analysis of insertion sequence IS5
  JOURNAL   Nature 297 (5862), 159-162 (1982)
   PUBMED   6281654
REFERENCE   7  (residues 1 to 441)
  AUTHORS   Klaer,R., Kuhn,S., Tillmann,E., Fritz,H.J. and Starlinger,P.
  TITLE     The sequence of IS4
  JOURNAL   Mol Gen Genet 181 (2), 169-175 (1981)
   PUBMED   6268937
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01609.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Limosilactobacillus urinaemulieris"
                     /db_xref="taxon:2742600"
     Protein         <1..441
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <1..412
                     /region_name="transpos_IS1182"
                     /note="IS1182 family transposase; NF033551"
                     /db_xref="CDD:468080"
ORIGIN      
        1 iarfviskdl eemiqssfka fhdylkaqgm ideasfidgt kilanankys fvwkkrtiky
       61 relnvekark llqeikqaev kiavdennfd vvqldtiial leqrieelnq qvsetakvsp
      121 npakqerrha kkyrralehc rqknleyrtq iqiagsrnsy sktdhaatfm rvkedpmrng
      181 qtkpaynlqi mtssqftlgy dlmqnptdtr tlipflkqla qnevlgreiv adagygsern
      241 ykyledelpd ctalipystm ikensrkwrs ddrkvmnwey hedddyyvnp agvrfnfkry
      301 ayrndkykfh rdfkvyqpek ydenhqvipq altprgntky imvnpqweyf kakarkslsk
      361 sttysrrkyd vetvfgnlka ylgfkrftvr glkkaksqig ialmalnmkk iagrlsifsi
      421 nfkkrknrse fqmkfrtvll i
//
LOCUS       WP_235972133             204 aa            linear   BCT 02-MAR-2025
DEFINITION  transglycosylase SLT domain-containing protein [Aquariibacter
            albus].
ACCESSION   WP_235972133
VERSION     WP_235972133.1
KEYWORDS    RefSeq.
SOURCE      Aquariibacter albus
  ORGANISM  Aquariibacter albus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Sphaerotilaceae; Aquariibacter.
REFERENCE   1  (residues 1 to 204)
  AUTHORS   Koraimann,G.
  TITLE     Lytic transglycosylases in macromolecular transport systems of
            Gram-negative bacteria
  JOURNAL   Cell Mol Life Sci 60 (11), 2371-2388 (2003)
   PUBMED   14625683
REFERENCE   2  (residues 1 to 204)
  AUTHORS   Mushegian,A.R., Fullner,K.J., Koonin,E.V. and Nester,E.W.
  TITLE     A family of lysozyme-like virulence factors in bacterial pathogens
            of plants and animals
  JOURNAL   Proc Natl Acad Sci U S A 93 (14), 7321-7326 (1996)
   PUBMED   8692991
REFERENCE   3  (residues 1 to 204)
  AUTHORS   Thunnissen,A.M., Rozeboom,H.J., Kalk,K.H. and Dijkstra,B.W.
  TITLE     Structure of the 70-kDa soluble lytic transglycosylase complexed
            with bulgecin A. Implications for the enzymatic mechanism
  JOURNAL   Biochemistry 34 (39), 12729-12737 (1995)
   PUBMED   7548026
REFERENCE   4  (residues 1 to 204)
  AUTHORS   Koonin,E.V. and Rudd,K.E.
  TITLE     A conserved domain in putative bacterial and bacteriophage
            transglycosylases
  JOURNAL   Trends Biochem Sci 19 (3), 106-107 (1994)
   PUBMED   8203016
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013618.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01464.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Aquariibacter albus"
                     /db_xref="taxon:2759899"
     Protein         1..204
                     /product="transglycosylase SLT domain-containing protein"
                     /calculated_mol_wt=22385
     Region          85..>180
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
ORIGIN      
        1 mrcaavwlgv sllaprpara grqveeplad avrtalsaai hraapprltf dspqahsahq
       61 rwrarvgprl qrrmpeaalr eafldtlwye saraglepal vlglievesg frkyaissag
      121 arglmqvmpf wvrligdgda arlfhlqtnl rfgcvilrhy ldtergnlfl algryngsrg
      181 qaaypnavla arkrwdlpad apag
//
LOCUS       WP_235972287             368 aa            linear   BCT 02-MAR-2025
DEFINITION  NapC/NirT family cytochrome c [Spirabiliibacterium falconis].
ACCESSION   WP_235972287
VERSION     WP_235972287.1
KEYWORDS    RefSeq.
SOURCE      Spirabiliibacterium falconis
  ORGANISM  Spirabiliibacterium falconis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Spirabiliibacterium.
REFERENCE   1  (residues 1 to 368)
  AUTHORS   Gon,S., Giudici-Orticoni,M.T., Mejean,V. and Iobbi-Nivol,C.
  TITLE     Electron transfer and binding of the c-type cytochrome TorC to the
            trimethylamine N-oxide reductase in Escherichia coli
  JOURNAL   J Biol Chem 276 (15), 11545-11551 (2001)
   PUBMED   11056172
REFERENCE   2  (residues 1 to 368)
  AUTHORS   Berks,B.C., Richardson,D.J., Reilly,A., Willis,A.C. and
            Ferguson,S.J.
  TITLE     The napEDABC gene cluster encoding the periplasmic nitrate
            reductase system of Thiosphaera pantotropha
  JOURNAL   Biochem J 309 (Pt 3) (Pt 3), 983-992 (1995)
   PUBMED   7639719
REFERENCE   3  (residues 1 to 368)
  AUTHORS   Mejean,V., Iobbi-Nivol,C., Lepelletier,M., Giordano,G., Chippaux,M.
            and Pascal,M.C.
  TITLE     TMAO anaerobic respiration in Escherichia coli: involvement of the
            tor operon
  JOURNAL   Mol Microbiol 11 (6), 1169-1179 (1994)
   PUBMED   8022286
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015237.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03264.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Spirabiliibacterium falconis"
                     /db_xref="taxon:572023"
     Protein         1..368
                     /product="NapC/NirT family cytochrome c"
                     /calculated_mol_wt=41045
     Region          15..361
                     /region_name="torC"
                     /note="trimethylamine-N-oxide reductase c-type cytochrome
                     TorC; TIGR02162"
                     /db_xref="CDD:274003"
ORIGIN      
        1 magrkkwlvg gaaifalgal alwgtqkvfh htnttefcvs chsmhipeqe wqgsnhfmnk
       61 rgiraechdc hvphqgfdyl ktkflalkdv wgeitgkipd qeayekhrlt maqsvwktmk
      121 eqdsatcrsc hnteawllhe qsktaqkmhk emqssgqtci dchkgivhfm pemessadaq
      181 aaisggdfst qnttlystqi gtatvgegqv rlmpyaqvid wkaegdnvqg vvhgwqqaga
      241 enliyqelgk rilvavlddd aksavniekt vhddvtnsdw revslhmqap kamltanikn
      301 lndygenlnq thcgtchavi gadhytanqw igvinsmkdr tsmnddqvra ltiylqhhak
      361 dsqqasek
//
LOCUS       WP_235972417             836 aa            linear   BCT 02-MAR-2025
DEFINITION  TcfC E-set like domain-containing protein [Pseudomonas
            paraversuta].
ACCESSION   WP_235972417
VERSION     WP_235972417.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas paraversuta
  ORGANISM  Pseudomonas paraversuta
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028277.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16967.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..836
                     /organism="Pseudomonas paraversuta"
                     /db_xref="taxon:2750624"
     Protein         1..836
                     /product="TcfC E-set like domain-containing protein"
                     /calculated_mol_wt=90640
     Region          149..806
                     /region_name="FimD"
                     /note="Outer membrane usher protein FimD/PapC [Cell
                     motility, Extracellular structures]; COG3188"
                     /db_xref="CDD:442421"
     Region          273..337
                     /region_name="TcfC"
                     /note="E-set like domain; pfam16967"
                     /db_xref="CDD:435681"
ORIGIN      
        1 msrytdlsla iafasaasfc qasiaatpsy ttllvqadgl pkefhehffd vplavrvmld
       61 nqvlgeamvv lsrdermtli eftdtrdsdi gpaerevwql llqqgvvlgp casqcaedll
      121 avhyslnnse vsiltgkter ktiesehyaq pqggsrglml snqlnlsggq gqdlaahlgl
      181 gavsslgnwt qtvrgqlskm ggdenqlmhs vyelhsqrew rdnflrlgyf tpesvglsrq
      241 prtfgnspdt tlgvmlgssd slakgglqps vypvfvtanr eatveiyrng vlinsqqvap
      301 glqaldtrpl pggiydievr liedgivtst sdelvykpsn wsntnqrwry nvffgretrl
      361 lsnwdkqedg dttvgtavny llhpravvgv sarqtkgqnq lgtsldlgla srtslytsvy
      421 rsqdhgtgme vqalhsyssg svvashnrsw ldtrntwetl ldgsrvrqrs pyngnvsnsa
      481 lsishrlqgh nsvnarishs egqisgisld lgwmrttqlf andinwrfsv fdraaavssg
      541 nqrnrgfdls fnmalgeask rmtasvgsra srsgdtdrna slgyqqnfet gavrsirgsv
      601 qtdtygvgla gsaqfegrya sgdvqvqrss ysrgvsgsln ltsslvvgag nialsgqqag
      661 nqasmiidve sdindlelra ddlsgsgtil rpgrnvipvs ayrdgvvqld flgvdapaat
      721 irpararyhl nkggvayqrv svintltllg rvvdadglpl kghhvinhas rgvtevdgff
      781 smefsadtpt leivrgervl crfdldpkvl klegdvlmag dlrcvedsma gklahn
//
LOCUS       WP_235972418             819 aa            linear   BCT 02-MAR-2025
DEFINITION  TcfC E-set like domain-containing protein [Pseudomonas
            paraversuta].
ACCESSION   WP_235972418
VERSION     WP_235972418.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas paraversuta
  ORGANISM  Pseudomonas paraversuta
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028277.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16967.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Pseudomonas paraversuta"
                     /db_xref="taxon:2750624"
     Protein         1..819
                     /product="TcfC E-set like domain-containing protein"
                     /calculated_mol_wt=88364
     Region          <161..789
                     /region_name="PRK15310"
                     /note="fimbrial outer membrane usher protein TcfC;
                     Provisional"
                     /db_xref="CDD:185210"
     Region          247..311
                     /region_name="TcfC"
                     /note="E-set like domain; pfam16967"
                     /db_xref="CDD:435681"
     Region          694..788
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
ORIGIN      
        1 mksslslleq tqglpkdfle hffdlplavr ieqdgkflgd grvvlsrnnt lqllemsefh
       61 dsklsaadrq rwtdylsqpr plgectascd nglvamhysl essqlslvtr gaevnpeevr
      121 yhqlpeggsh glvlrnqlnv fggsgtdtng rysvdaqgsi gnwttvgnyq vdrstyegae
      181 trqsiqslyg qrehenqfvr agffqpnfqg varqpsapga vpstivglml gtsdilaids
      241 aspsiypvyv tanrqgtvei yrngsliytq pvepglqlid trrlpggiye vevrlvedgn
      301 vtssetelin kpahwsnaqe rwryssfvgq qrnllnsyst ddanelavgg vvnylahpra
      361 vlgamvqqvg kersvggsln whasdsanly anvfhsseyg mgldvqairn yatgsimfnh
      421 slnwqnadky lktqagpqqn ssialnhrld dinsltaras ysngvtngvg ldlsfsrrsr
      481 llgsdatwrt svfdrpatas sgsqrnrgvd vtltmalgsd grrynvgagt rtgstggrdq
      541 yvnagvsqdl qgglfsnvng nvssdrygvg lngaasfdtd lvrgdvfaqr sslegglsgg
      601 vnlqstvamg ggklvtagng vssgahtgmi idvesdlpdl glmaqdtnga ttelkpgrnf
      661 vpvtaykpgn lqldfsgrea paasihpsmt syhlnkggva yrqvkvmqtl tvmgqvqdaa
      721 gkplrgaqvr nhagrsvaea dgfftlemsa rqpmlevshp sikgctfhld dkrypregdv
      781 vmvgklkcdd lntskpllre tlkktsksge irlshelng
//
LOCUS       WP_235972076             214 aa            linear   BCT 02-MAR-2025
DEFINITION  agmatine deiminase family protein [Limosilactobacillus
            urinaemulieris].
ACCESSION   WP_235972076
VERSION     WP_235972076.1
KEYWORDS    RefSeq.
SOURCE      Limosilactobacillus urinaemulieris
  ORGANISM  Limosilactobacillus urinaemulieris
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Limosilactobacillus.
REFERENCE   1  (residues 1 to 214)
  AUTHORS   Shirai,H., Blundell,T.L. and Mizuguchi,K.
  TITLE     A novel superfamily of enzymes that catalyze the modification of
            guanidino groups
  JOURNAL   Trends Biochem Sci 26 (8), 465-468 (2001)
   PUBMED   11504612
REFERENCE   2  (residues 1 to 214)
  AUTHORS   McGraw,W.T., Potempa,J., Farley,D. and Travis,J.
  TITLE     Purification, characterization, and sequence analysis of a
            potential virulence factor from Porphyromonas gingivalis,
            peptidylarginine deiminase
  JOURNAL   Infect Immun 67 (7), 3248-3256 (1999)
   PUBMED   10377098
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016274.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04371.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Limosilactobacillus urinaemulieris"
                     /db_xref="taxon:2742600"
     Protein         1..214
                     /product="agmatine deiminase family protein"
                     /GO_function="GO:0004668 - protein-arginine deiminase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009446 - putrescine biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=24135
     Region          1..>194
                     /region_name="DDAH_eukar"
                     /note="N,N dimethylarginine dimethylhydrolase, eukaryotic;
                     cl19186"
                     /db_xref="CDD:473146"
ORIGIN      
        1 miwperqdnw rnggkpaqka ftelakiisq fqpvtmlvne dqylnakekl agiarvvems
       61 nndarakdvl piyinrghdi ravnfsfnaw gglvdglyfs wdfddqlagk vadlekidyy
      121 sektvlegcs iitdgegtii ttedvllaed rnqnpsktfm eailkeylga kkiiwlkhdy
      181 fldetdgdid nmvnhllset glfpiivtaq tkin
//
LOCUS       WP_235972457             168 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Pseudomonas paraversuta].
ACCESSION   WP_235972457
VERSION     WP_235972457.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas paraversuta
  ORGANISM  Pseudomonas paraversuta
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 168)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 168)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025054.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13673.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Pseudomonas paraversuta"
                     /db_xref="taxon:2750624"
     Protein         1..168
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=19268
     Region          15..165
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
     Site            order(95..97,107..108)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
ORIGIN      
        1 mtdssflrtl cektmeirrf rigdeialfd vfysaiheva srdythdqve awapadldqt
       61 lwaehlrnlr pfvaevdgki vgyadiqpng yidhffvsgt hprqgigtll mnriheearl
      121 lgideltsdv sktaerffel ygfhvvrrgf pirrgvtlqn almqknlk
//
LOCUS       WP_235972470             358 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: phosphotransferase [Pseudomonas].
ACCESSION   WP_235972470
VERSION     WP_235972470.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
REFERENCE   1  (residues 1 to 358)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 358)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..358
                     /product="phosphotransferase"
                     /calculated_mol_wt=41805
ORIGIN      
        1 mnsdlhplqg rrtlyrwqhg qlqdhlrall pqwriqplti vsqdldsnas fvnyvrhhqi
       61 tdpgtgmtve lveksirkmf figsqearfy rqrdmlnast qfqypaclgv ietpweslif
      121 tefvrgkppr mpniapqlal giaeqealsh dylsrqsahk apllwsmdfy rpwfllrprf
      181 nfarclpele rlgqsderfs gladkfkpft pllarlskaa rrspkcishm dylrknlfvd
      241 kgqlllidws evkvgrvgfd ggaylsalfr rkdmplflka qqqfidtyrq alpahfnpdd
      301 alrnlhyifl lnalfhclrs etiseyqekk rmpllrqkyd yllglldkqe qiatihpl
//
LOCUS       WP_235972557             441 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF4910 domain-containing protein [Brucella].
ACCESSION   WP_235972557
VERSION     WP_235972557.1
KEYWORDS    RefSeq.
SOURCE      Brucella
  ORGANISM  Brucella
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16254.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Brucella"
                     /db_xref="taxon:234"
     Protein         1..441
                     /product="DUF4910 domain-containing protein"
                     /calculated_mol_wt=49706
     Region          22..441
                     /region_name="COG4310"
                     /note="Uncharacterized conserved protein, cotains an
                     aminopeptidase-like domain [General function prediction
                     only]"
                     /db_xref="CDD:443451"
ORIGIN      
        1 mdsgydrgvg snrpqdsaig heihalatrl fpicrsltge gvrqtlaiig eqlpldmhrm
       61 ksgdqvfdwq vpsewlirda fiaddagrri vdfnhnnlhv vnfsvpvwsr mrltelrghi
      121 htlpeqpdci pyrtcyhnad wgfcmahnal lemqddhyqv vidaehregw ldygefihkg
      181 sskdvflist hlchpsland ncsglallsf lgaalkrrqt rltyrllfgp atfgalawlr
      241 qneaqlplvk hglvlscvgd gggpnykrsr rgnaeidqim ayllpraglp darlhdfwpy
      301 gyderqfcsp gfnlpvgsfq rslygsfpey htssdnldfi kadylrqsyh lvmqaidlae
      361 rnwtpvntap kgepqlgrrg lfehrdgkqa panyamallw vlnlsdgtht vldmaarsei
      421 dfetlyyaaq rlcavglldp a
//
LOCUS       WP_235972568             140 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Brucella pseudogrignonensis].
ACCESSION   WP_235972568
VERSION     WP_235972568.1
KEYWORDS    RefSeq.
SOURCE      Brucella pseudogrignonensis (Ochrobactrum pseudogrignonense)
  ORGANISM  Brucella pseudogrignonensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Brucella pseudogrignonensis"
                     /db_xref="taxon:419475"
     Protein         1..140
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=14640
     Region          <1..140
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 megiqivarq ptlrglaisy smyqvtwgvl yvvvpvfvgs hydasvgssv tgflwaamgi
       61 aggisallag hlrttgrerh imaigmvita laswpvaaef gfgglaigli lagvmsgptd
      121 valltlrqrr tdpqqlgrvm
//
LOCUS       WP_235972593             278 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidoglycan-binding protein [Brucella pseudogrignonensis].
ACCESSION   WP_235972593
VERSION     WP_235972593.1
KEYWORDS    RefSeq.
SOURCE      Brucella pseudogrignonensis (Ochrobactrum pseudogrignonense)
  ORGANISM  Brucella pseudogrignonensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 278)
  AUTHORS   Briers,Y., Volckaert,G., Cornelissen,A., Lagaert,S., Michiels,C.W.,
            Hertveldt,K. and Lavigne,R.
  TITLE     Muralytic activity and modular structure of the endolysins of
            Pseudomonas aeruginosa bacteriophages phiKZ and EL
  JOURNAL   Mol Microbiol 65 (5), 1334-1344 (2007)
   PUBMED   17697255
REFERENCE   2  (residues 1 to 278)
  AUTHORS   Gooley,P.R., O'Connell,J.F., Marcy,A.I., Cuca,G.C., Salowe,S.P.,
            Bush,B.L., Hermes,J.D., Esser,C.K., Hagmann,W.K., Springer,J.P. et
            al.
  TITLE     The NMR structure of the inhibited catalytic domain of human
            stromelysin-1
  JOURNAL   Nat Struct Biol 1 (2), 111-118 (1994)
   PUBMED   7656014
REFERENCE   3  (residues 1 to 278)
  AUTHORS   Foster,S.J.
  TITLE     Cloning, expression, sequence analysis and biochemical
            characterization of an autolytic amidase of Bacillus subtilis 168
            trpC2
  JOURNAL   J Gen Microbiol 137 (8), 1987-1998 (1991)
   PUBMED   1683402
REFERENCE   4  (residues 1 to 278)
  AUTHORS   Dideberg,O., Charlier,P., Dive,G., Joris,B., Frere,J.M. and
            Ghuysen,J.M.
  TITLE     Structure of a Zn2+-containing D-alanyl-D-alanine-cleaving
            carboxypeptidase at 2.5 A resolution
  JOURNAL   Nature 299 (5882), 469-470 (1982)
   PUBMED   7121588
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013625.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01471.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Brucella pseudogrignonensis"
                     /db_xref="taxon:419475"
     Protein         1..278
                     /product="peptidoglycan-binding protein"
                     /calculated_mol_wt=30244
     Region          22..190
                     /region_name="GH19"
                     /note="Chitinase, GH19 family [Carbohydrate transport and
                     metabolism]; COG3179"
                     /db_xref="CDD:442412"
     Region          204..271
                     /region_name="PGRP"
                     /note="Peptidoglycan-binding (PGRP) domain of
                     peptidoglycan hydrolases [Cell wall/membrane/envelope
                     biogenesis]; COG3409"
                     /db_xref="CDD:442635"
ORIGIN      
        1 mtdlashinh tvlvaiapkv avkkiarqqd iitkcgpllp allkefqvtt alrivhflaq
       61 iahesdgfct tveyasgavy egrtdlgntq kgdgpryrgh gliqttgryn hgqftswsra
      121 rdpkspdfvq ypekladfpw allsafyyws sknlnalady dnlvavtkvv nggtngladr
      181 aaylakakdi vaelqadnls snlgdvvlrr gmrglavadl qralrgagfy hlsidsifgp
      241 gteqavkafq rdhrlladgl vgaktfaqlk rfmpevaa
//
LOCUS       WP_235972680             724 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxy terminal-processing peptidase [Pedobacter ghigonis].
ACCESSION   WP_235972680
VERSION     WP_235972680.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter ghigonis
  ORGANISM  Pedobacter ghigonis
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023246.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11818.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Pedobacter ghigonis"
                     /db_xref="taxon:2730403"
     Protein         1..724
                     /product="carboxy terminal-processing peptidase"
                     /EC_number="3.4.21.102"
                     /calculated_mol_wt=80182
     Region          2..706
                     /region_name="PRK11186"
                     /note="carboxy terminal-processing peptidase"
                     /db_xref="CDD:236873"
ORIGIN      
        1 mlrriffvif taavlachaa pktqpmvegv tnvkpdeqqq lvikevvnli esynykkiqv
       61 ndsisslild kyiksldpgr nyflatdike fekyrytldd dfkngdlsgp fyiynvyakr
      121 lneyftysla qiktkfdfnq tdsyvydrek mpwaatsaal ndtwkkrvky elvnlnlagt
      181 tdaknvetlt kryqnlqsqt sktnnqdvfq ilmdaftesi dphtnyfvpa ratefneems
      241 rsfegigarl qlenevvkis eiipggpafk gkqlsagdri iavaqgdgef vdvigwrldv
      301 tvtkikgpkg tkvrlkvipv gkemsskpvi ielvrekiil edqsakkkvk titsngkdyk
      361 igiislpafy adfkaanagd knyksttrdv rklvdslkni dkvnaivldl rgngggslve
      421 aisltglfid rgpvvqvkdl rgkievdede nsgvawngpf gvmvdrlsas aseifagaiq
      481 dygrgivmgs qtygkgtvqs sidlnklvnp smlqrvagli akdktvgtsp ssanpadinl
      541 gqinltmakf yrvagsstqh kgvtpdvvfp svypmdkige dtepsalpwd viassnfkpv
      601 anltavkaql iknseqrias sldfkylkqd iadlkkrdae tsvtlneakl kaerdaqeak
      661 slarqnelra lrglpaikkg dkitkqdafd fiedeslkvm gdfmqqsgny vmnlgipaae
      721 kink
//
LOCUS       WP_235972720             674 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-L-arabinofuranosidase domain-containing protein [Pedobacter
            ghigonis].
ACCESSION   WP_235972720
VERSION     WP_235972720.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter ghigonis
  ORGANISM  Pedobacter ghigonis
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
REFERENCE   1  (residues 1 to 674)
  AUTHORS   Ito,T., Saikawa,K., Kim,S., Fujita,K., Ishiwata,A., Kaeothip,S.,
            Arakawa,T., Wakagi,T., Beckham,G.T., Ito,Y. and Fushinobu,S.
  TITLE     Crystal structure of glycoside hydrolase family 127
            beta-l-arabinofuranosidase from Bifidobacterium longum
  JOURNAL   Biochem Biophys Res Commun 447 (1), 32-37 (2014)
   PUBMED   24680821
REFERENCE   2  (residues 1 to 674)
  AUTHORS   Fujita,K., Takashi,Y., Obuchi,E., Kitahara,K. and Suganuma,T.
  TITLE     Characterization of a novel beta-L-arabinofuranosidase in
            Bifidobacterium longum: functional elucidation of a DUF1680 protein
            family member
  JOURNAL   J Biol Chem 289 (8), 5240-5249 (2014)
   PUBMED   24385433
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019556.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07944.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Pedobacter ghigonis"
                     /db_xref="taxon:2730403"
     Protein         1..674
                     /product="beta-L-arabinofuranosidase domain-containing
                     protein"
                     /calculated_mol_wt=76700
     Region          97..547
                     /region_name="LanC_like"
                     /note="Cyclases involved in the biosynthesis of
                     lantibiotics, and similar proteins; cl04955"
                     /db_xref="CDD:471159"
ORIGIN      
        1 mmiknllnia llclttvssa qnpngqstap lqkpalrknp ylelplgaik aegwlkemlv
       61 rqktgstgnl dklypsvmgq rngwlggdgd qwergpywvd gllplayilq dkeliaktkp
      121 wvewaiksqq pdgyfgpikd ysnepglqrd nsrdwwpkmv mlkilkqyyt atndkrvitl
      181 mtnyfkyqlk elpskpldhw sfwaryragd nlavvywlyn ktndqfllel adlihrqtfd
      241 fanafaegqm ltrfgsvhav nlaqgmkepl vyyqqhpeqk yldalkkgfk dldkyngfan
      301 gmfggdeslh gnnptqgsel ctavemmftl etaleitgdv dyadrlekia fnalpaqasd
      361 dymtrqyfqq anqvmisrqm hnfdvnhhgt dlcygllsgy pcctsnmhqg wpkftqnlwy
      421 atadkgvaal vyspsevklk vaddkeiiik eetnypfeea ikftltfakk skainfpfhl
      481 ripawckeat vkvngttvet skgnaivkin rdwqsgdvve lqlpmhifkn twfensvsve
      541 rgpityalkm geavkpvknt idpidngdaf deihpttpwn fglfdvpnnk leekftveka
      601 apvsnypwnl enapiqiktm akripswkly nemagpvpys ityqletake aeeiilvpyg
      661 strlriaqfp lvgr
//
LOCUS       WP_235972767             303 aa            linear   BCT 02-MAR-2025
DEFINITION  cbb3-type cytochrome c oxidase N-terminal domain-containing protein
            [Pedobacter ghigonis].
ACCESSION   WP_235972767
VERSION     WP_235972767.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter ghigonis
  ORGANISM  Pedobacter ghigonis
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
REFERENCE   1  (residues 1 to 303)
  AUTHORS   Buschmann,S., Warkentin,E., Xie,H., Langer,J.D., Ermler,U. and
            Michel,H.
  TITLE     The structure of cbb3 cytochrome oxidase provides insights into
            proton pumping
  JOURNAL   Science 329 (5989), 327-330 (2010)
   PUBMED   20576851
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026065.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14715.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Pedobacter ghigonis"
                     /db_xref="taxon:2730403"
     Protein         1..303
                     /product="cbb3-type cytochrome c oxidase N-terminal
                     domain-containing protein"
                     /calculated_mol_wt=33180
     Region          123..>292
                     /region_name="DHOR"
                     /note="Di-haem oxidoreductase, putative peroxidase;
                     cl21467"
                     /db_xref="CDD:473872"
ORIGIN      
        1 mkkfnitlll ilpaitalaa deqvapvevs sdpsllglsq aetlllimll fvlvllvvsi
       61 tllnafkvmy reqlnptpyh apakeaaldy dswlktkkhk psiwskilgl kpieeekdiv
      121 idhaydgihe lnnpvpawfn flfygtilfg igylfyyyig gyglnqdqly qaemtrsaee
      181 kaiylqksan aidensvkad kaapviesgk tifaancavc hgpsggglig pnltdefwlh
      241 ggginnifkt ikygvpakgm iswektltpk qisevsnyil slegskpaga kapqgekyep
      301 atk
//
LOCUS       WP_235972870             717 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5723 family protein [Flavobacterium undicola].
ACCESSION   WP_235972870
VERSION     WP_235972870.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium undicola
  ORGANISM  Flavobacterium undicola
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040164.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18990.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Flavobacterium undicola"
                     /db_xref="taxon:1932779"
     Protein         1..717
                     /product="DUF5723 family protein"
                     /calculated_mol_wt=78111
     Region          41..422
                     /region_name="DUF5723"
                     /note="Family of unknown function (DUF5723); pfam18990"
                     /db_xref="CDD:465943"
     Region          453..504
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275366"
     Region          482..717
                     /region_name="OmpA"
                     /note="Outer membrane protein OmpA and related
                     peptidoglycan-associated (lipo)proteins [Cell
                     wall/membrane/envelope biogenesis]; COG2885"
                     /db_xref="CDD:442131"
     Region          505..531
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275366"
     Region          612..715
                     /region_name="OmpA_C-like"
                     /note="Peptidoglycan binding domains similar to the
                     C-terminal domain of outer-membrane protein OmpA; cd07185"
                     /db_xref="CDD:143586"
     Site            order(617..618,651..652,655,659..660,663,705,709)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:143586"
ORIGIN      
        1 mkkriflslf afasfcsana qsylgyipdn yagvqgvlyn pasiadsrfk adinlfsiss
       61 svgndlygvk ifdvfksgyd fdleakknfs nannavfntd imgpsfmfni apkhtlavyt
      121 raravlnvid vngkvindit kdnstsfpsa tvgsanavgn swgelglsya avlyqkgqhf
      181 lkggitakyl qgvanyhlqa tgvtmaynen lilpqnstyt ttgsvvygss qdfaansdld
      241 idskskgfgv dlglvyewrp eytadradin dlkevnkykl rfgfsvtdlg smkydkgvrn
      301 nynlnktitq anydsadnfd eflknnypnt vvngnvksyl ptalhadvdw nihnkfylnt
      361 nvdlgvvskt klnqnsianr vsitpryesk wfsayvpfsy mdyskqaqvg lglrtgvffi
      421 gsgsiisnfv skssraadih lgmkipiyqk kakdqdgdgi ldkddecpev agpvenkgcp
      481 wgdkdndgil dkddkcpdva gpaanngcpw gdkdkdgvld kddkcpdvag paenagcpwe
      541 dqdndgvldk ddkcptvagp kenagcpwld tdgdgvldkd dkcpkvkgtl anegcpevtk
      601 evikklndys ksvlfdsska tikaesnskl eeivkvmney nnanfklegh tdstgsaakn
      661 lqlskdraaa vknylivkgi sadrlssegy gitkpiasnk tvagraenrr veiilvk
//
LOCUS       WP_235973005             503 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3106 domain-containing protein [Luteimonas sp. MC1895].
ACCESSION   WP_235973005
VERSION     WP_235973005.1
KEYWORDS    RefSeq.
SOURCE      Luteimonas sp. MC1895
  ORGANISM  Luteimonas sp. MC1895
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Luteimonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022748.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11304.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Luteimonas sp. MC1895"
                     /db_xref="taxon:2819513"
     Protein         1..503
                     /product="DUF3106 domain-containing protein"
                     /calculated_mol_wt=52827
     Region          <65..502
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
ORIGIN      
        1 mtprspadpt gapastalaa flrgverrgl vfawllagsr etggqalawa lerfrreagr
       61 iafgdwsrhf walllaapal rtpptaprwe aglawlsgig hgpraalllr lvaglaesda
      121 stvlgisrpt yrlglqralp hredgsadve awealgrsaq elvrnlppep vaahaptadd
      181 ddatptsagg rrplgrglrv alalvalltl lalgltfrmd rlpdgldaap ghilsealpa
      241 aeapagryge ddalalhpdl allldagnad paaadpafha wlvgeaaaag gategadtpa
      301 gadrpadaav pvapvpapad aaridaaalr padqrladla paargqlsrq rdlwdalpha
      361 ergerrerwl awrdlaater aamraaaarf aartpaeqaa lrarfdalda sdrhgwllgp
      421 dlgpdyprlh alvaqvptda raamlevlrg ldpqgrddla vlaartppqs raelrvella
      481 tpaaqrgrwl rnrvapppgg sgr
//
LOCUS       WP_235972697             315 aa            linear   BCT 02-MAR-2025
DEFINITION  CdaR family protein [Pedobacter ghigonis].
ACCESSION   WP_235972697
VERSION     WP_235972697.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter ghigonis
  ORGANISM  Pedobacter ghigonis
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
REFERENCE   1  (residues 1 to 315)
  AUTHORS   Meinnel,T. and Blanquet,S.
  TITLE     Characterization of the Thermus thermophilus locus encoding peptide
            deformylase and methionyl-tRNA(fMet) formyltransferase
  JOURNAL   J Bacteriol 176 (23), 7387-7390 (1994)
   PUBMED   7961514
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019561.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07949.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Pedobacter ghigonis"
                     /db_xref="taxon:2730403"
     Protein         1..315
                     /product="CdaR family protein"
                     /calculated_mol_wt=36076
     Region          <120..278
                     /region_name="YbbR"
                     /note="Cyclic di-AMP synthase regulator CdaR, YbbR domain
                     [Signal transduction mechanisms]; COG4856"
                     /db_xref="CDD:443884"
ORIGIN      
        1 mpfirltkie krrvfsllac lllaiaawlf malnnkyiyt aktvlvfknt ptkrafyplq
       61 sdtidlqveg tgwqllfarl risppsvsvn lsqlntkdfi vfsdqlfnin rqlestqkvi
      121 svkpdtlyfd ftkrivkkvp vklidkldfv kqygisseii lnpkyvkvag paeelakiks
      181 wptdtlkldk iqgsstirvg lqhslhknvs iypssvevkl pvdeftekti evplklinnr
      241 nynsiklypk kikvtflval snydqvddsf itatvdadew qnlkhrqftv kitqfphyck
      301 lvsvtpskid fivek
//
LOCUS       WP_235973234             526 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: response regulator [Niallia].
ACCESSION   WP_235973234
VERSION     WP_235973234.1
KEYWORDS    RefSeq.
SOURCE      Niallia
  ORGANISM  Niallia
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 526)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Niallia"
                     /db_xref="taxon:2837506"
     Protein         1..526
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=61812
     Region          5..124
                     /region_name="REC_YesN-like"
                     /note="phosphoacceptor receiver (REC) domain of YesN and
                     related helix-turn-helix containing response regulators;
                     cd17536"
                     /db_xref="CDD:381091"
     Site            order(9..12,15..17,20,106..107)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381091"
     Region          <323..521
                     /region_name="AraC"
                     /note="AraC-type DNA-binding domain and AraC-containing
                     proteins [Transcription]; COG2207"
                     /db_xref="CDD:441809"
     Region          438..521
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
ORIGIN      
        1 mmkalivdde rhvregikll adwsgneitd iyeasngeda iqiieaanpe iifsdmkmpk
       61 vdgtqllkwm dehyahgkti vvtgyddyhy mrkamhygss dyllkpinpe mlndtlrrvv
      121 newkqeeeer krklnrtkli nkmkpayrdh qltqmlnndl fdkhvleefl ltkaqvytig
      181 llqvsngive efngdkdltl ftllnvinee lssnnkgiaf hyvtgkgeiv lllirrkeea
      241 vvimrevhtt ilkllgisct lsmglevtsv nqlnlsyqya ksimmnrdvl dnqqgkimie
      301 kkeheikslm gysssikmai qtgeihafhs ligqiqkdit nnpplslsql lhleheylmi
      361 strwykefnl siripsniee riysfmdkeg ifqleaykar kkkeislflr rvkrqntrrt
      421 qnviheieky ikanfhreik lqeisehfyi sreyisrkfk qeyninisey lvtirmkkaq
      481 ellkssnlkv ydianmigyq ddkyfrkvfk kiigvspney remeir
//
LOCUS       WP_235973265             412 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Niallia circulans].
ACCESSION   WP_235973265
VERSION     WP_235973265.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019581.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07969.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..412
                     /product="amidohydrolase family protein"
                     /calculated_mol_wt=46087
     Region          2..410
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
     Site            order(57,59,210,213,242,309)
                     /site_type="active"
                     /db_xref="CDD:238618"
ORIGIN      
        1 mmldlvlkna qlpfkenptn igikdgkihs isssnlmgke emdlegnvll ppfvemhthl
       61 dtvltagepr fnqsgtlgea idiwsvrkql ltkedvknra fkalkmlmey gvlyvraavd
      121 isdsdltalh aimelreelk sflslqiiaf pqngiiscle nqerlekail lgadavsavp
      181 hlentreegi qslefafsla kkyekeihif cdevddehsr flevvasltm qgemegkvta
      241 shanallyys dtyankvmsl vkkaqvtivc cplvnttmqg rtdahpkgrg itrlkelaey
      301 gvnvciahdd iqtpfypfgn gnilqaahma lhlahmtgre elkqivnmit ingaraysik
      361 dkygievgke anfacfsvkd vyeiffkqpk crylfrkgal vvetvperts wk
//
LOCUS       WP_235973366             477 aa            linear   BCT 02-MAR-2025
DEFINITION  amino acid permease [Sarcina ventriculi].
ACCESSION   WP_235973366
VERSION     WP_235973366.1
KEYWORDS    RefSeq.
SOURCE      Sarcina ventriculi
  ORGANISM  Sarcina ventriculi
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Sarcina.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Sarcina ventriculi"
                     /db_xref="taxon:1267"
     Protein         1..477
                     /product="amino acid permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=52101
     Region          3..459
                     /region_name="2A0307_GadC"
                     /note="glutamate:gamma-aminobutyrate antiporter;
                     TIGR00910"
                     /db_xref="CDD:129988"
ORIGIN      
        1 menkkklsmf gflfitgsil velyeyptfa tsgfsavfyl laggflwflp vvlcaaemat
       61 vegwseggvf twtkntlgek wgfahiffqf vvftigavtm iyyvvgaiay vtgwtalnsd
      121 ptlkflavii ifwavtfiql sgirntakia rigfiggvli pafilfilsa vyifsgnpid
      181 idisaktflp nftninslvv lvsfmlsyma vevsathvnd mknpkrdypi aviillflai
      241 ilntigaisv gavvpksvls lnegvfqtfa llinhfghfs wlvdiivifl aigsiaevss
      301 wivgptrgls vageygifpk glakrnkndv apklliiqgi vvtmwaivlt fgggssnvsf
      361 fmamtltviv ylaayflffl ayinlvlkkr nlkrayeipg givvklilai iglifsaiaf
      421 iisflppsgl qsgsigeytt ilivcfavtm vlpfiiyyvf kgrkikatsk nvetkvs
//
LOCUS       WP_235973415             209 aa            linear   BCT 02-MAR-2025
DEFINITION  M14 family zinc carboxypeptidase [Niallia circulans].
ACCESSION   WP_235973415
VERSION     WP_235973415.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012471.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00246.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..209
                     /product="M14 family zinc carboxypeptidase"
                     /GO_function="GO:0004181 - metallocarboxypeptidase
                     activity [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=23801
     Region          <1..163
                     /region_name="Peptidase_M14_like"
                     /note="M14 family of metallocarboxypeptidases and related
                     proteins; cl11393"
                     /db_xref="CDD:472171"
ORIGIN      
        1 minpdgvtiq qgkinkfpff skrkikkmng glndftrwks nglgvdlnrq ypagweyikd
       61 skkepfykny kgkapfeake vqaiveltek ikptiavayh ssgqeifwqy nngvnedrdr
      121 miaevlaket gyklgvppkd avgggftdwf ittyhlpayt ieicplvder hpsltnfske
      181 warnktiprt lieeakkida ihkkmlgds
//
LOCUS       WP_235973217             146 aa            linear   BCT 02-MAR-2025
DEFINITION  MEDS domain-containing protein [Niallia circulans].
ACCESSION   WP_235973217
VERSION     WP_235973217.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 146)
  AUTHORS   Anantharaman,V. and Aravind,L.
  TITLE     MEDS and PocR are novel domains with a predicted role in sensing
            simple hydrocarbon derivatives in prokaryotic signal transduction
            systems
  JOURNAL   Bioinformatics 21 (12), 2805-2811 (2005)
   PUBMED   15814558
REFERENCE   2  (residues 1 to 146)
  AUTHORS   La Roche,S.D. and Leisinger,T.
  TITLE     Identification of dcmR, the regulatory gene governing expression of
            dichloromethane dehalogenase in Methylobacterium sp. strain DM4
  JOURNAL   J Bacteriol 173 (21), 6714-6721 (1991)
   PUBMED   1938878
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025774.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14417.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..146
                     /product="MEDS domain-containing protein"
                     /calculated_mol_wt=17433
     Region          16..>125
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 menkkkqfle gkerlhvlfl ytsmrnymee vlpfiyagie areyvilidn drnfkrifeq
       61 lktkltstql kqvhyvnsld fyfssgsyhp saitdyfnkm vqpyldqsip frswahvewa
      121 tmeepfhlig nfekkmitls tifpfh
//
LOCUS       WP_235973514             224 aa            linear   BCT 02-MAR-2025
DEFINITION  HAD family hydrolase [Peribacillus faecalis].
ACCESSION   WP_235973514
VERSION     WP_235973514.1
KEYWORDS    RefSeq.
SOURCE      Peribacillus faecalis
  ORGANISM  Peribacillus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Peribacillus.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Osman,C., Haag,M., Wieland,F.T., Brugger,B. and Langer,T.
  TITLE     A mitochondrial phosphatase required for cardiolipin biosynthesis:
            the PGP phosphatase Gep4
  JOURNAL   EMBO J 29 (12), 1976-1987 (2010)
   PUBMED   20485265
REFERENCE   2  (residues 1 to 224)
  AUTHORS   Hisano,T., Hata,Y., Fujii,T., Liu,J.Q., Kurihara,T., Esaki,N. and
            Soda,K.
  TITLE     Crystal structure of L-2-haloacid dehalogenase from Pseudomonas sp.
            YL. An alpha/beta hydrolase structure that is different from the
            alpha/beta hydrolase fold
  JOURNAL   J Biol Chem 271 (34), 20322-20330 (1996)
   PUBMED   8702766
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012905.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00702.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Peribacillus faecalis"
                     /db_xref="taxon:2772559"
     Protein         1..224
                     /product="HAD family hydrolase"
                     /calculated_mol_wt=25458
     Region          <11..223
                     /region_name="PRK06698"
                     /note="bifunctional
                     5'-methylthioadenosine/S-adenosylhomocysteine
                     nucleosidase/phosphatase; Validated"
                     /db_xref="CDD:136007"
ORIGIN      
        1 mekylnceef aiifdmdgtl fqtdkileta lhdtfeylre relwskktpi dtyrkiigvp
       61 lpdvwatllp nqpvtvrnka neifheqlir hiqegngaly pntiemlqsl kekgyeliia
      121 sngqtaylqa ivsyyrldcw vtqtfsieri atmkksdlva aikkkygitk gavvgdrlsd
      181 ieaakcngfl aigcrfefaq edelaqadyv indllellpi vqka
//
LOCUS       WP_235973545             323 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Peribacillus faecalis].
ACCESSION   WP_235973545
VERSION     WP_235973545.1
KEYWORDS    RefSeq.
SOURCE      Peribacillus faecalis
  ORGANISM  Peribacillus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Peribacillus.
REFERENCE   1  (residues 1 to 323)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 323)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Peribacillus faecalis"
                     /db_xref="taxon:2772559"
     Protein         1..323
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=37249
     Region          10..246
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(72,74,76..77,172..173,191,237)
                     /site_type="active"
                     /db_xref="CDD:293811"
ORIGIN      
        1 milsnegvtv hpivvptkfs lksfnfylve qadsltlidg giptdecwey lenvlakndl
       61 hvsditqvll thnhedhvgi inritdikdv pvyahadsiy rlkrdkdyfa lridffkqly
      121 eemdcgdfgt rqiekitklm srnekntvrs diipiaendi isglkvfetp ghspdhivff
      181 deqkkelfgg dhlvshissn aivepdrdgr riqtlsqyvq slqkcsnfei nlvypghgel
      241 irnsrelfny rlerihlksd qvltfikegy ntgkelaqvf ykekyksefa lvmseivghl
      301 dylesnhkve kvkkkgvwhy kas
//
LOCUS       WP_235973652              65 aa            linear   BCT 02-MAR-2025
DEFINITION  CBS domain-containing protein [Peribacillus faecalis].
ACCESSION   WP_235973652
VERSION     WP_235973652.1
KEYWORDS    RefSeq.
SOURCE      Peribacillus faecalis
  ORGANISM  Peribacillus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Peribacillus.
REFERENCE   1  (residues 1 to 65)
  AUTHORS   Scott,J.W., Hawley,S.A., Green,K.A., Anis,M., Stewart,G.,
            Scullion,G.A., Norman,D.G. and Hardie,D.G.
  TITLE     CBS domains form energy-sensing modules whose binding of adenosine
            ligands is disrupted by disease mutations
  JOURNAL   J Clin Invest 113 (2), 274-284 (2004)
   PUBMED   14722619
REFERENCE   2  (residues 1 to 65)
  AUTHORS   Kemp,B.E.
  TITLE     Bateman domains and adenosine derivatives form a binding contract
  JOURNAL   J Clin Invest 113 (2), 182-184 (2004)
   PUBMED   14722609
REFERENCE   3  (residues 1 to 65)
  AUTHORS   Janosik,M., Kery,V., Gaustadnes,M., Maclean,K.N. and Kraus,J.P.
  TITLE     Regulation of human cystathionine beta-synthase by
            S-adenosyl-L-methionine: evidence for two catalytically active
            conformations involving an autoinhibitory domain in the C-terminal
            region
  JOURNAL   Biochemistry 40 (35), 10625-10633 (2001)
   PUBMED   11524006
REFERENCE   4  (residues 1 to 65)
  AUTHORS   Zhang,R., Evans,G., Rotella,F.J., Westbrook,E.M., Beno,D.,
            Huberman,E., Joachimiak,A. and Collart,F.R.
  TITLE     Characteristics and crystal structure of bacterial
            inosine-5'-monophosphate dehydrogenase
  JOURNAL   Biochemistry 38 (15), 4691-4700 (1999)
   PUBMED   10200156
REFERENCE   5  (residues 1 to 65)
  AUTHORS   Ponting,C.P.
  TITLE     CBS domains in CIC chloride channels implicated in myotonia and
            nephrolithiasis (kidney stones)
  JOURNAL   J Mol Med (Berl) 75 (3), 160-163 (1997)
   PUBMED   9106071
REFERENCE   6  (residues 1 to 65)
  AUTHORS   Bateman,A.
  TITLE     The structure of a domain common to archaebacteria and the
            homocystinuria disease protein
  JOURNAL   Trends Biochem Sci 22 (1), 12-13 (1997)
   PUBMED   9020585
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012780.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00571.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Peribacillus faecalis"
                     /db_xref="taxon:2772559"
     Protein         1..65
                     /product="CBS domain-containing protein"
                     /calculated_mol_wt=7414
     Region          <1..49
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
     Region          6..49
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341360"
ORIGIN      
        1 mktdvdsvfe dtllrdaarq msikslrflp vvnrnyrlig iltrtnlvda iyesiwgnee
       61 veesi
//
LOCUS       WP_235973655              62 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1003 domain-containing protein [Peribacillus faecalis].
ACCESSION   WP_235973655
VERSION     WP_235973655.1
KEYWORDS    RefSeq.
SOURCE      Peribacillus faecalis
  ORGANISM  Peribacillus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Peribacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017970.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06210.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..62
                     /organism="Peribacillus faecalis"
                     /db_xref="taxon:2772559"
     Protein         1..62
                     /product="DUF1003 domain-containing protein"
                     /calculated_mol_wt=7425
     Region          <1..46
                     /region_name="DUF1003"
                     /note="Protein of unknown function (DUF1003); pfam06210"
                     /db_xref="CDD:428827"
ORIGIN      
        1 mnlmlsclaa lqapiimmsq nrqsqkdsqr skydyhtdlk selilencti kywnwrrire
       61 ky
//
LOCUS       WP_235973844             181 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Parasphingopyxis marina].
ACCESSION   WP_235973844
VERSION     WP_235973844.1
KEYWORDS    RefSeq.
SOURCE      Parasphingopyxis marina
  ORGANISM  Parasphingopyxis marina
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Parasphingopyxidaceae; Parasphingopyxis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024824.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13432.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Parasphingopyxis marina"
                     /db_xref="taxon:2761622"
     Protein         1..181
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=19533
     Region          1..>134
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          27..53
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(29..30,33..34,36,60,63..64,67..68,70..71,95,98..99,
                     102..103,106)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          58..89
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          94..122
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          128..155
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mdrygeaada ygralalagg edapwtawil yggalldggq wedarpaler avelapdsav
       61 alnylgyall erredlgrae elirraaeld pgsasiidsl gwvhyvqgni deaipmlesa
      121 argepaepti nehlgdaywt vgrrrdarfa wqaalvsaed eaaerirekl digltaetas
      181 p
//
LOCUS       WP_235973865             147 aa            linear   BCT 02-MAR-2025
DEFINITION  prepilin-type N-terminal cleavage/methylation domain-containing
            protein [Parasphingopyxis marina].
ACCESSION   WP_235973865
VERSION     WP_235973865.1
KEYWORDS    RefSeq.
SOURCE      Parasphingopyxis marina
  ORGANISM  Parasphingopyxis marina
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Parasphingopyxidaceae; Parasphingopyxis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019575.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07963.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Parasphingopyxis marina"
                     /db_xref="taxon:2761622"
     Protein         1..147
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /calculated_mol_wt=15836
     Region          2..145
                     /region_name="typeII_sec_gspH"
                     /note="type II secretion system protein H; TIGR01708"
                     /db_xref="CDD:130769"
ORIGIN      
        1 mreagftlte lmvvlviigl lastvvltmp dprgrlvdeg eafaararaa qeaavaemrd
       61 talwvspagy gferhdgerw aamerppfqd rqwpegtqvt vaqqdgertr aifdatgltd
      121 pldltlardg qqigvtigad gtirvqg
//
LOCUS       WP_235973873             186 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF484 family protein [Parasphingopyxis marina].
ACCESSION   WP_235973873
VERSION     WP_235973873.1
KEYWORDS    RefSeq.
SOURCE      Parasphingopyxis marina
  ORGANISM  Parasphingopyxis marina
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Parasphingopyxidaceae; Parasphingopyxis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016243.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04340.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Parasphingopyxis marina"
                     /db_xref="taxon:2761622"
     Protein         1..186
                     /product="DUF484 family protein"
                     /calculated_mol_wt=19710
     Region          2..184
                     /region_name="YigA"
                     /note="Uncharacterized conserved protein YigA, DUF484
                     family [Function unknown]; COG3159"
                     /db_xref="CDD:442393"
ORIGIN      
        1 mgtvidfetg avaqlqrrva qaeednrdll afahghsgat aaihnavlaa ieadgldhll
       61 hivtqqwpdi lgvdavslal yvgdrgvrad isgmqfvera iiekaageie gvllraceqg
      121 hplfgpssal vqaealvrld naaplpsgll algqresedf etehgadllr flgdslarli
      181 grwllp
//
LOCUS       WP_235974126             927 aa            linear   BCT 02-MAR-2025
DEFINITION  PAS domain-containing protein [Luteimonas deserti].
ACCESSION   WP_235974126
VERSION     WP_235974126.1
KEYWORDS    RefSeq.
SOURCE      Luteimonas deserti
  ORGANISM  Luteimonas deserti
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Luteimonas.
REFERENCE   1  (residues 1 to 927)
  AUTHORS   Hefti,M.H., Francoijs,K.J., de Vries,S.C., Dixon,R. and Vervoort,J.
  TITLE     The PAS fold. A redefinition of the PAS domain based upon
            structural prediction
  JOURNAL   Eur J Biochem 271 (6), 1198-1208 (2004)
   PUBMED   15009198
REFERENCE   2  (residues 1 to 927)
  AUTHORS   Ponting,C.P. and Aravind,L.
  TITLE     PAS: a multifunctional domain family comes to light
  JOURNAL   Curr Biol 7 (11), R674-R677 (1997)
   PUBMED   9382818
REFERENCE   3  (residues 1 to 927)
  AUTHORS   Zhulin,I.B., Taylor,B.L. and Dixon,R.
  TITLE     PAS domain S-boxes in Archaea, Bacteria and sensors for oxygen and
            redox
  JOURNAL   Trends Biochem Sci 22 (9), 331-333 (1997)
   PUBMED   9301332
REFERENCE   4  (residues 1 to 927)
  AUTHORS   Borgstahl,G.E., Williams,D.R. and Getzoff,E.D.
  TITLE     1.4 A structure of photoactive yellow protein, a cytosolic
            photoreceptor: unusual fold, active site, and chromophore
  JOURNAL   Biochemistry 34 (19), 6278-6287 (1995)
   PUBMED   7756254
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020036.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08447.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Luteimonas deserti"
                     /db_xref="taxon:2752306"
     Protein         1..927
                     /product="PAS domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=100416
     Region          37..126
                     /region_name="PAS_3"
                     /note="PAS fold; pfam08447"
                     /db_xref="CDD:430001"
     Site            order(39,43,49,66..69,95,100)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(63,67,75,78..79,107,109)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          134..384
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          262..782
                     /region_name="KinE"
                     /note="Sporulation sensor histidine kinase E [Cell cycle
                     control, cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG5809"
                     /db_xref="CDD:444511"
     Region          <536..927
                     /region_name="PRK13557"
                     /note="histidine kinase; Provisional"
                     /db_xref="CDD:237425"
ORIGIN      
        1 mnppfssgrl dservklala agaivgtwfw dvrqdlmmvd dalarafdld pgvagtpvrl
       61 eqllasvhpd dlpeleaaia eavrvggrya hqyrtrntdg vyrwieaigr veldadgkav
      121 dfagvlidih errrvegerd qaqtllrsfi daapgvvyak drqgrmllgn rgtteligrp
      181 petyightda efladpeqaa avmaaderim ssgeteqlee evsyadgrra cwlstkaplr
      241 dasgavvgli gtsiditdrk aaearhreie eryrlaaqat ndaiwdwria dgtvvwneal
      301 gtlfghgrtg tdaqwwldhi hsedrarves dihdviagke sawateyrfr radgsfasvl
      361 drgtvlrdaa gapvrmigam ldltasraae aalaeseerl rlaaeasdlg fwdvdlvhda
      421 mtwsartkam fgmsvdvevs lqdfyaslhp ddrdairaaf eaasdpgrra lydveyrtig
      481 rddgvvrwia akgrglfeag rcirvvgvvm dvtarrmsda rlhelnerle srvreevaer
      541 trveealrqs qkmeavgqlt ggiahdfnnm laavigpldl lasrignddp rarryidtai
      601 dgasraaqlt qrllafarrq plqpvaldvn rlvagmrdll ahslgasiql etvpaeavwr
      661 thvdanqlen vilnlavnar dampgggrlt iatancdies daadaqglsp gqyvrisvsd
      721 tgsgmppevm aqafdpfftt kqigkgtglg lsqvygflkq saghvrlrsv vgrgtvvdly
      781 lprladgada plprladaaa pprgqhqrvl vvdddpavrq vscdalselg yqvlaadgaa
      841 salalldthp diallftdvv mpdvngpqla drararrpgl kvlfvtgnsg nmllsdgvpd
      901 pavhvigkpf tldalamrva avlgpdg
//
LOCUS       WP_235974164              54 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1153 domain-containing protein [Luteimonas deserti].
ACCESSION   WP_235974164
VERSION     WP_235974164.1
KEYWORDS    RefSeq.
SOURCE      Luteimonas deserti
  ORGANISM  Luteimonas deserti
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Luteimonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018350.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06627.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..54
                     /organism="Luteimonas deserti"
                     /db_xref="taxon:2752306"
     Protein         1..54
                     /product="DUF1153 domain-containing protein"
                     /calculated_mol_wt=6187
ORIGIN      
        1 mseeeeirrw marrksalvl kiiqskttva rasrqfdltp aeienwiqdg krgs
//
LOCUS       WP_235974212             242 aa            linear   BCT 02-MAR-2025
DEFINITION  haloacid dehalogenase-like hydrolase [Luteimonas deserti].
ACCESSION   WP_235974212
VERSION     WP_235974212.1
KEYWORDS    RefSeq.
SOURCE      Luteimonas deserti
  ORGANISM  Luteimonas deserti
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Luteimonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024122.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12710.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Luteimonas deserti"
                     /db_xref="taxon:2752306"
     Protein         1..242
                     /product="haloacid dehalogenase-like hydrolase"
                     /calculated_mol_wt=26269
     Region          12..205
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     Site            order(15..19,123..124,167,184..185,188..189)
                     /site_type="active"
                     /db_xref="CDD:319763"
ORIGIN      
        1 mlrpavatpk tvvfdfdhtl ydgdsgthlf awlikrswwr rvlallvtpl cgpmiaflpt
       61 rrrgisayvw igtiglhsrg sldalidryv athaevirpr llpvaldvlh ahreagdrvv
      121 iatgappela railafvahe avpvvgtavg pkfgavsakr hchaeekmrm lrergyvdid
      181 iaysdssadl pllkaarspv vvnpkrgsve mfrrvlpsgt pilnwgcadr ggapvtalpa
      241 qq
//
LOCUS       WP_235974423             221 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: SDR family NAD(P)-dependent oxidoreductase
            [Actibacterium].
ACCESSION   WP_235974423
VERSION     WP_235974423.1
KEYWORDS    RefSeq.
SOURCE      Actibacterium
  ORGANISM  Actibacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae.
REFERENCE   1  (residues 1 to 221)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 221)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Actibacterium"
                     /db_xref="taxon:1433986"
     Protein         1..221
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=23042
     Region          3..216
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(7,9..10,12,31..32,73..75,126..128,143,147,173..176)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(100,128,143,147)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mtalvtganr giglqlvrgy aadgdspigt hrgsaapqvp gvrwetldva epasqaalah
       61 tlaahpidll vcnaglyldg genlaggypp emwaqmfatn vtgvfltvqs llpnlqlsaa
      121 pkiaiissqm ashtrapgrs yiyrsskaaa lnlgrnlatd lkplgiavgi yhpgwvktem
      181 ggesaeitae qasaglrarf aalrlettgc fetwdghpha y
//
LOCUS       WP_235974544             683 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: TonB-dependent receptor domain-containing protein
            [Actibacterium].
ACCESSION   WP_235974544
VERSION     WP_235974544.1
KEYWORDS    RefSeq.
SOURCE      Actibacterium
  ORGANISM  Actibacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae.
REFERENCE   1  (residues 1 to 683)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Actibacterium"
                     /db_xref="taxon:1433986"
     Protein         1..683
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=74800
     Region          1..683
                     /region_name="PRK13483"
                     /note="ligand-gated channel protein"
                     /db_xref="CDD:184080"
ORIGIN      
        1 mfltltalta pslafaqgad eevfvlddiv vtaggfeqal kdapasvsii tseelkkgsf
       61 tnladalrev qgvvttgtad gqdiyirglp gqytlilvdg krqntresrt ngssgyeqsf
      121 ipplsaieri evvrgpmssl ygsdamggvi niitkpvadt wsgsvtaett lqgedgfens
      181 qqlsfyasgp ivnnrlglql wgrkydqdas sisggpsgsd dfdltgrltw riddnnelll
      241 eagrtqitae dygdlsytdh drdhwslthk gqyggtetel sfsqeigert mydrsatddp
      301 fvenlrspkv rnsvfdakas tpldwngahq mtfgaqvmqt tihdqnpgaq anipeenryd
      361 ekfsldqwal yaedewhlrd dfaltlglry sdheayggqv tprlyavwda spsltvkggv
      421 stgfrapdir siapgyaytt ggrgcasnsp pscgvilgnp dldpeettnf eigaiyeadt
      481 fslsatafht rfknklqqin tgdpwldgpt ytgsdgsqyn yliyqnfnvd raeitglela
      541 gnwdiapsls trasytytds eqktgdymgf plartpehma slrfdwitpv ngldtwfstn
      601 yhgseiasgl rvgpqgetvt ingqtgqkyk pyttvdlgas yqlnetatln aavynvfnke
      661 vredefqtva egrrlwvglt aef
//
LOCUS       WP_235974589             430 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Stappia albiluteola].
ACCESSION   WP_235974589
VERSION     WP_235974589.1
KEYWORDS    RefSeq.
SOURCE      Stappia albiluteola
  ORGANISM  Stappia albiluteola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Stappia.
REFERENCE   1  (residues 1 to 430)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 430)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 430)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 430)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Stappia albiluteola"
                     /db_xref="taxon:2758565"
     Protein         1..430
                     /product="ATP-binding protein"
                     /calculated_mol_wt=47933
     Region          <165..429
                     /region_name="envZ"
                     /note="osmolarity sensor protein; Provisional; PRK09467"
                     /db_xref="CDD:236531"
ORIGIN      
        1 mpkglftral liivipmvil qgvlaflfme khydlvtrrl aqavirevat iisvietypq
       61 dadfrsitdi aandlglsia vlpleplppp rpkpffdfvd qvlsneirtq isrpfwidtv
      121 grssyveiri qlkehvlrvi arrsqtyasn shifivwmvt tslvllvial iflrnqikpi
      181 eqlanaaesf gkgrpiddfr prgalevrra aqafiemrrr ierqieqrtt mlagvshdlr
      241 tiltrfrlql alfgdseeta alksdvddmn hmledylafa rgdgdeqarp adlslmfedl
      301 eaeaeiagae vssaligett vvvkpiafkr cltnlvtnaa ryagtvrieg rnaerwltit
      361 veddgpgipp eerenvfrpf yrldaarsre aggsglglai ardiarahgg dillddsplg
      421 glrakvrlps
//
LOCUS       WP_235974635             262 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Stappia albiluteola].
ACCESSION   WP_235974635
VERSION     WP_235974635.1
KEYWORDS    RefSeq.
SOURCE      Stappia albiluteola
  ORGANISM  Stappia albiluteola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Stappia.
REFERENCE   1  (residues 1 to 262)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Stappia albiluteola"
                     /db_xref="taxon:2758565"
     Protein         1..262
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=29169
     Region          24..252
                     /region_name="ompR"
                     /note="osmolarity response regulator; Provisional;
                     PRK09468"
                     /db_xref="CDD:181883"
ORIGIN      
        1 maysrrrqee trcreenmgp saggsrvavv eddalvratv vdtleeagfe placenaeal
       61 aralaagrqp eliildlqlp drdglavags irsssdipii mltgrgsdid rivgleigad
      121 dyivkpfnpr elvarvkavl rrrvpgavrt aerrrgyrfl gyaldlearr ltdpdgqpit
      181 ltvsefdllt alveargrvl trnqlldlmh rrnddvfdrt vdvlilrlrr kieptprhpr
      241 lirterglgy vfdapvevla et
//
LOCUS       WP_235974865             341 aa            linear   BCT 02-MAR-2025
DEFINITION  LicD family protein [Stappia albiluteola].
ACCESSION   WP_235974865
VERSION     WP_235974865.1
KEYWORDS    RefSeq.
SOURCE      Stappia albiluteola
  ORGANISM  Stappia albiluteola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Stappia.
REFERENCE   1  (residues 1 to 341)
  AUTHORS   Kuchta,K., Knizewski,L., Wyrwicz,L.S., Rychlewski,L. and
            Ginalski,K.
  TITLE     Comprehensive classification of nucleotidyltransferase fold
            proteins: identification of novel families and their
            representatives in human
  JOURNAL   Nucleic Acids Res 37 (22), 7701-7714 (2009)
   PUBMED   19833706
REFERENCE   2  (residues 1 to 341)
  AUTHORS   Zhang,J.R., Idanpaan-Heikkila,I., Fischer,W. and Tuomanen,E.I.
  TITLE     Pneumococcal licD2 gene is involved in phosphorylcholine metabolism
  JOURNAL   Mol Microbiol 31 (5), 1477-1488 (1999)
   PUBMED   10200966
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04991.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Stappia albiluteola"
                     /db_xref="taxon:2758565"
     Protein         1..341
                     /product="LicD family protein"
                     /calculated_mol_wt=37911
     Region          141..>222
                     /region_name="LicD"
                     /note="LicD family; cl01378"
                     /db_xref="CDD:470175"
ORIGIN      
        1 mrsddrfqrl fpwlaclacl iaalglvwlq padllsrlvc naaaigfama gyrianrtfy
       61 avalavaals tivlpalatq iilsfiigaa asflllawfv tpfsdrrarp glrysvngve
      121 kvmpalsfag eapfllcqke qekiidlary tdefltrngi syvlawgsll gaerhqgmvp
      181 wdddvdfaly rkadidrmfr dyedlaaqak rdgyvlhriy nhwkmtpqna tchpildiyk
      241 eahvycedep vvrvpfdgll lsapaaphqr iaelygesal ktglhempfw dssaipplid
      301 rllgprvifv atrlykaafl ghslfkrras vpagpqsasq p
//
LOCUS       WP_235975897             152 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2170 family protein [Vreelandella sedimenti].
ACCESSION   WP_235975897
VERSION     WP_235975897.1
KEYWORDS    RefSeq.
SOURCE      Vreelandella sedimenti
  ORGANISM  Vreelandella sedimenti
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021457.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09938.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Vreelandella sedimenti"
                     /db_xref="taxon:2729618"
     Protein         1..152
                     /product="DUF2170 family protein"
                     /calculated_mol_wt=16263
     Region          11..152
                     /region_name="DUF2170"
                     /note="Uncharacterized protein conserved in bacteria
                     (DUF2170); cl01551"
                     /db_xref="CDD:470249"
ORIGIN      
        1 mttptvtdgi taselyklvs qpasnnaeet tlewpegtis fdeanqtliw elndygnlsm
       61 tlsrsenewv amapiaavdg vknsaelnev llrqgislpl asvgiveidg qdlyvaygql
      121 fgdsklesic aelhatasaa mdvaeliqth fv
//
LOCUS       WP_235976023             416 aa            linear   BCT 02-MAR-2025
DEFINITION  YbfB/YjiJ family MFS transporter [Vreelandella sedimenti].
ACCESSION   WP_235976023
VERSION     WP_235976023.1
KEYWORDS    RefSeq.
SOURCE      Vreelandella sedimenti
  ORGANISM  Vreelandella sedimenti
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018485.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06779.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Vreelandella sedimenti"
                     /db_xref="taxon:2729618"
     Protein         1..416
                     /product="YbfB/YjiJ family MFS transporter"
                     /calculated_mol_wt=42846
     Region          24..389
                     /region_name="MFS_4"
                     /note="Uncharacterized MFS-type transporter YbfB;
                     pfam06779"
                     /db_xref="CDD:399632"
ORIGIN      
        1 mmnrsltthd lpalmtgima tlagigiarf aytpllpaii qegwftasqg aylgaanllg
       61 yfigalaahs lserfsprlv maasfagial sfvlcagagg flwfffwrlv sgaagailmv
      121 vgpslalaat pperrasvga mvftgiglga llsafivpll lglslsvtwg tlgllciaag
      181 llcdyflrqg vahlasptta sprvnsptgg agvkiivmlv vgayaldaig fmphtvfwvd
      241 ylarenalgn qaaslqwgif glgalcgpfm vgalaqrvgw qgglmiafat kaaavllpvf
      301 slallsqsvs sfmvgamipg ivaltsgrla elvgptahkk lwgqataafa aaqavagyam
      361 salygawgsy tplfaisgli lvagfllvll srgvqqrhsh lsaqqptqqs snqgrq
//
LOCUS       WP_235976009             479 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Vreelandella
            sedimenti].
ACCESSION   WP_235976009
VERSION     WP_235976009.1
KEYWORDS    RefSeq.
SOURCE      Vreelandella sedimenti
  ORGANISM  Vreelandella sedimenti
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
REFERENCE   1  (residues 1 to 479)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 479)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 479)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 479)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 479)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 479)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 479)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 479)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 479)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Vreelandella sedimenti"
                     /db_xref="taxon:2729618"
     Protein         1..479
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=53492
     Region          67..>471
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mvdmtmsfpi apdedarlaa lhqielldtp eepafdrvtr lvtrllnvpi stltlmdanr
       61 qwfksrvgve lhetprdiaf caytvatsep liiedacqdp rfahnplvtg psgirfyagi
      121 pihslqglal gslcaldtkp rtisedelaa lqdlaaiitd eihlrerlvl ekknaqasqq
      181 alnelyrsme cqierrtnel nlviasayda yisldtqdvi ldwnraaemm fgwprkaala
      241 rpvtelifpa glpnanerta ieytarrcdg tdlpvelrvk tliidgrerr slfihditer
      301 qqlerlrdqq aredaltqlp nrralderlp eamartrrtq qplailfmdl dgfkaindth
      361 ghamgdellr viakrlgktv retdyiarwa gdefvllleg septaiepla nklvqvvqep
      421 lvagnaalhv svsigvalyl pesaetanel lkradvamye akrsgkaqvr iaqpldsac
//
LOCUS       WP_235976081             124 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase [Vreelandella sedimenti].
ACCESSION   WP_235976081
VERSION     WP_235976081.1
KEYWORDS    RefSeq.
SOURCE      Vreelandella sedimenti
  ORGANISM  Vreelandella sedimenti
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
REFERENCE   1  (residues 1 to 124)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 124)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Vreelandella sedimenti"
                     /db_xref="taxon:2729618"
     Protein         1..124
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=13604
     Region          <1..100
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
ORIGIN      
        1 mtgricrgqp lpdgsrlndt agfappvdke rlyriidvln alseetgktv pqiainwllq
       61 rptvssvlig arneeqlrqn lgavgwqlgs eqiaqldaas avtppypyyp ywngqfaern
      121 ppmv
//
LOCUS       WP_235976065             920 aa            linear   BCT 02-MAR-2025
DEFINITION  NERD domain-containing protein [Vreelandella sedimenti].
ACCESSION   WP_235976065
VERSION     WP_235976065.1
KEYWORDS    RefSeq.
SOURCE      Vreelandella sedimenti
  ORGANISM  Vreelandella sedimenti
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
REFERENCE   1  (residues 1 to 920)
  AUTHORS   Grynberg,M. and Godzik,A.
  TITLE     NERD: a DNA processing-related domain present in the anthrax
            virulence plasmid, pXO1
  JOURNAL   Trends Biochem Sci 29 (3), 106-110 (2004)
   PUBMED   15055202
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019976.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08378.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Vreelandella sedimenti"
                     /db_xref="taxon:2729618"
     Protein         1..920
                     /product="NERD domain-containing protein"
                     /calculated_mol_wt=103332
     Region          32..144
                     /region_name="NERD"
                     /note="Nuclease-related domain; pfam08378"
                     /db_xref="CDD:462454"
     Region          651..703
                     /region_name="UvrD_C_2"
                     /note="UvrD-like helicase C-terminal domain; pfam13538"
                     /db_xref="CDD:463913"
ORIGIN      
        1 malkayrgrq fdhthenkaf drlydalsmh clstnqdwhl lanfyvggre ldallikpna
       61 liiidfkafs gtltfsesgp wmmtdesgrs vevkggasvn plrqltinkh alidflsrnm
      121 adlnttcnwr htaalvafqg avvfdalhlp ggikpwfyit derrlirdld aivskeislp
      181 pagiermikq lgielyvpag vpdvrllgeg ledtstkval thqqsallqq lrqwlqsatg
      241 lfrlagmast gkrflfphvv eeigaagyev lllipsvrls gtyhhsqaqs tsiytwlysr
      301 epddfevind rkigihkike gllsprqipv lvdahllsde efkvtdrryg sghliqdfls
      361 viesykapfv vigdpyqtpr gskqrslmtd sllehwqlsv vgdllseqvv pdpqdalsqf
      421 qshlvsrlin trfnslprvv gkrlqiqdes nknnwepdvs nvcaesillc atheqnrkin
      481 aavktrilgh tsplrlgird rvdfynrtpi itadsetwas selrwisage ialidgvdeg
      541 iethsvqlrg rskptylrfq lahcrlpgvg eitfrylidf yeaerpeltt dqvlalqvla
      601 rqlakpllte rkerlpdkkd payaearasy dryeyqilqa qgyataalir pahvmtlhra
      661 qgrhwpcvwv nasrsssggk pnnadyfrwl ytastiaeeq lvvrqmpalt pliyatlsra
      721 hdlrvgpfav naglfydsar qpkeqeasiv pppgfsdtel lplllalner leksawrige
      781 wnentfqvvi kfierdqqad vavrlhydkk ktittkvfis gnpedqasid klvsepfhaq
      841 ssalqdalda vleklafhgf slahvtesdy llhmvlvage davdvhinad krgmvssiri
      901 sratserait rftnameala
//
LOCUS       WP_235976276             276 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein [Niallia
            circulans].
ACCESSION   WP_235976276
VERSION     WP_235976276.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 276)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..276
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=29967
     Region          1..>87
                     /region_name="NlpA"
                     /note="ABC-type metal ion transport system, periplasmic
                     component/surface antigen [Inorganic ion transport and
                     metabolism]; COG1464"
                     /db_xref="CDD:441073"
     Region          46..273
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mktflklnal lifvisinll aacsnsansq eestktasks etsdkkvirv gatgqsfpns
       61 yqedgeligf dvevletiak nlgykvqwtl agfeglvgql gvgkldtian afeyteerae
      121 qynysttysy tstgiavlkd spydsvkdln gqtvagvlgs nkinvledyv kkngldievr
      181 qyetrdgpqs dtikgavagy vqgkpilqat inksklplki leddlkksei gfpfakteqg
      241 dalrkainae iaklradgtl aeisekyygd ditsee
//
LOCUS       WP_235976237             256 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase [Niallia circulans].
ACCESSION   WP_235976237
VERSION     WP_235976237.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 256)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 256)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..256
                     /product="phosphotransferase"
                     /calculated_mol_wt=29133
     Region          27..256
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 mnelplkqle kligslpsis lvaeqgstst vyqlltrsgt yilksafdek yrdwlqteac
       61 vlekligkef ipvpyyygfi keqasshlim syeqgitlta alnqaktdte kcaliqsfgq
      121 llhnlhttei mdpfhhvgew lserllkaey yvkkgwtegs ndlltllknn kpapinqtii
      181 hgdcttdnvl vvngavtkfi dvagmtvgdp rydealairc fvhnnrfkea fyagykhyqi
      241 tmdefryfde glyeff
//
LOCUS       WP_235976296             139 aa            linear   BCT 02-MAR-2025
DEFINITION  AEC family transporter [Niallia circulans].
ACCESSION   WP_235976296
VERSION     WP_235976296.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015509.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03547.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..139
                     /product="AEC family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=15488
     Region          1..>135
                     /region_name="YfdV"
                     /note="Predicted permease, AEC (auxin efflux carrier)
                     family [General function prediction only]; COG0679"
                     /db_xref="CDD:440443"
ORIGIN      
        1 menfntqfly sviiigigyf fkqrniikek dgeglariif nitlpcliit tlhnviieks
       61 llilvflglf ygvlisiigl flfrneankq kgmlgmlipg fnigifaypl vqgiwgpegi
      121 nilvcsilem plllselvi
//
LOCUS       WP_235976385             331 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein [Niallia circulans].
ACCESSION   WP_235976385
VERSION     WP_235976385.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024554.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13155.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..331
                     /product="toprim domain-containing protein"
                     /calculated_mol_wt=37297
     Region          <147..322
                     /region_name="PRK08624"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:236314"
     Region          216..300
                     /region_name="Toprim_2"
                     /note="Toprim-like; pfam13155"
                     /db_xref="CDD:463793"
ORIGIN      
        1 maevyirnqp vdidvrtele qfawtrpnws snkliaaspf rydrtpsffv rleqhgdypa
       61 gtfhdsgayd tewssgglvk llaflrneta eetedyllae yapyaadena pirlrkihvk
      121 pqrtrqalgs eflaqytedy sylesrgiga nfqselgiky dakshavvip wrqadgrlan
      181 vkyrqtrgkv fwyakgawpi rellfgidrv gktaliceae idalswrvag ydalatggas
      241 fnefkrdlil tspieellia tdndkagekl rteieqalkg rvrighvrvd hrvkdaneal
      301 mkfgvaslrd avaraegrss lyvnlstlrl g
//
LOCUS       WP_235976391             292 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Niallia circulans].
ACCESSION   WP_235976391
VERSION     WP_235976391.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..292
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=31170
     Region          12..292
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(55,57..58,60,79..81,133..135,182..184,197,201,
                     227..230)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(158,184,197,201)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mskldeqtil sngvtpqkqs eqpgiekemd pipiyeleth vgsgklkgkv alitggdsgi
       61 gkavaigyak egadiaiayl neqedaentk krieqegvkc tlhagdvade afcnqlvedv
      121 iqqhgklnil vnnaarqevk nsvleisaeq lkrtfdvnff smvyltkaai phlsvgdsli
      181 ytasinayvg nkalidytst kgaivsftrs iaqelaskgi rvngvapgpi wtplipatmt
      241 tdlqesfgvs tplgrpgqpa dlvepyilla segsaymtgq fihvnggqym ss
//
LOCUS       WP_235976412             358 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6094 domain-containing protein [Niallia circulans].
ACCESSION   WP_235976412
VERSION     WP_235976412.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039653.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19587.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..358
                     /product="DUF6094 domain-containing protein"
                     /calculated_mol_wt=40710
     Region          <6..187
                     /region_name="DUF6094"
                     /note="Uncharacterized methyltransferase family (DUF6094);
                     pfam19587"
                     /db_xref="CDD:437419"
ORIGIN      
        1 mshignklka gffatpetqg eyiikllnve gsgvwfdptc gegeilnqla aafnneetii
       61 ntygveldrr raerasklln hcinapiesm viqneavsfl flnppydfal kgmddssakr
      121 kewvelerny rylkengili yiipsyrfad qkisrflatn fnevgimrfs kedyedykqc
      181 ifigrkkagk ykgineklyd fllrmdseef ilknvntidq ivtrefkwnv psgyknlstf
      241 ytklankddf vesireskgf eafmnrtkpr qlsiggepil plnqgqlsll lasgaingel
      301 gegenyhlvq glesvskivd eevkhhdngs ktvitktrtk rdvsvkiitp ngmikklv
//
LOCUS       WP_235976413             299 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase [Niallia circulans].
ACCESSION   WP_235976413
VERSION     WP_235976413.1
KEYWORDS    RefSeq.
SOURCE      Niallia circulans (Bacillus circulans)
  ORGANISM  Niallia circulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Niallia.
REFERENCE   1  (residues 1 to 299)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 299)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Niallia circulans"
                     /db_xref="taxon:1397"
     Protein         1..299
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=33143
     Region          3..298
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     Site            order(9..11,43,48,75,116,146..147,166,194..200,249,
                     266..269,274,277..278)
                     /site_type="active"
                     /db_xref="CDD:381296"
     Site            order(43,48,75,116)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381296"
ORIGIN      
        1 mhvtklgyga nsvgghnlfp nlsdetgknv vrnaldagid fldtayvygl grseeligev
       61 lkergnrqdi vlaskaahkl vdgkieldns keflrksved slkrlqtdyi dlfyvhfpdg
      121 vtpmaevagt lkelkdegki lavgasnlda eqieefnqdg ylevfqaeys lfkrqaeeiy
      181 lpycvennis fipyfplasg lltgkyskds iisggkennp lfqgeafirn vekvnqlkqm
      241 aeakgfdath falawlleqp avdviipgak steqlknnlr tldvslteee vkkiseifv
//
LOCUS       WP_235976607             360 aa            linear   BCT 02-MAR-2025
DEFINITION  ImmA/IrrE family metallo-endopeptidase [Sandaracinobacteroides
            hominis].
ACCESSION   WP_235976607
VERSION     WP_235976607.1
KEYWORDS    RefSeq.
SOURCE      Sandaracinobacteroides hominis
  ORGANISM  Sandaracinobacteroides hominis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandaracinobacteroides.
REFERENCE   1  (residues 1 to 360)
  AUTHORS   Masiewicz,P., Brzostek,A., Wolanski,M., Dziadek,J. and
            Zakrzewska-Czerwinska,J.
  TITLE     A novel role of the PrpR as a transcription factor involved in the
            regulation of methylcitrate pathway in Mycobacterium tuberculosis
  JOURNAL   PLoS One 7 (8), e43651 (2012)
   PUBMED   22916289
  REMARK    Erratum:[PLoS One. 2014;9(11):e113015]
REFERENCE   2  (residues 1 to 360)
  AUTHORS   Vujicic-Zagar,A., Dulermo,R., Le Gorrec,M., Vannier,F., Servant,P.,
            Sommer,S., de Groot,A. and Serre,L.
  TITLE     Crystal structure of the IrrE protein, a central regulator of DNA
            damage repair in deinococcaceae
  JOURNAL   J Mol Biol 386 (3), 704-716 (2009)
   PUBMED   19150362
REFERENCE   3  (residues 1 to 360)
  AUTHORS   Bose,B., Auchtung,J.M., Lee,C.A. and Grossman,A.D.
  TITLE     A conserved anti-repressor controls horizontal gene transfer by
            proteolysis
  JOURNAL   Mol Microbiol 70 (3), 570-582 (2008)
   PUBMED   18761623
REFERENCE   4  (residues 1 to 360)
  AUTHORS   Gerstmeir,R., Cramer,A., Dangel,P., Schaffer,S. and Eikmanns,B.J.
  TITLE     RamB, a novel transcriptional regulator of genes involved in
            acetate metabolism of Corynebacterium glutamicum
  JOURNAL   J Bacteriol 186 (9), 2798-2809 (2004)
   PUBMED   15090522
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017885.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06114.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Sandaracinobacteroides hominis"
                     /db_xref="taxon:2780086"
     Protein         1..360
                     /product="ImmA/IrrE family metallo-endopeptidase"
                     /calculated_mol_wt=39549
     Region          <8..>38
                     /region_name="HipB"
                     /note="Transcriptional regulator, contains XRE-family HTH
                     domain [Transcription]; COG1396"
                     /db_xref="CDD:441006"
     Region          179..280
                     /region_name="ImmA"
                     /note="Zn-dependent peptidase ImmA, M78 family
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG2856"
                     /db_xref="CDD:442104"
ORIGIN      
        1 mehrfpklal wesgearptl kqlqafatav hvpigylflp appveqlpip dfrtmdgrgv
       61 grpspdlldm lyacqerqgw fkdyarsvrl pvieqvgsar lgdsptavaa amsealgfdl
      121 aaraacrtwe ealrlfigga dnlgilvmvs gvvlsnnnrr ldpeefrgfa ladpqaplvf
      181 ingadsksaq mftlahelah lwlgatavsn agagpihghr reevwcnava aellvpleal
      241 qadlrenekl edavarltrr ykvsslvilr rlldagwltq vqfdvawaie rarlralaeq
      301 gngggdfyrt tlarvsrrfa ralvestleg qtlyrdafrm lgvaktetfn higqevgvlv
//
LOCUS       WP_235976672              59 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2478 domain-containing protein [Bradyrhizobium archetypum].
ACCESSION   WP_235976672
VERSION     WP_235976672.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium archetypum
  ORGANISM  Bradyrhizobium archetypum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022115.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10649.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..59
                     /organism="Bradyrhizobium archetypum"
                     /db_xref="taxon:2721160"
     Protein         1..59
                     /product="DUF2478 domain-containing protein"
                     /calculated_mol_wt=6337
     Region          13..>58
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 mianlaeidp krvaailyrp eqdadrllgd ftqdlarqgv rvggivqrnf kgangtkpc
//
LOCUS       WP_235976742             444 aa            linear   BCT 02-MAR-2025
DEFINITION  Wadjet anti-phage system protein JetA family protein
            [Bradyrhizobium australiense].
ACCESSION   WP_235976742
VERSION     WP_235976742.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium australiense
  ORGANISM  Bradyrhizobium australiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 444)
  AUTHORS   Doron,S., Melamed,S., Ofir,G., Leavitt,A., Lopatina,A., Keren,M.,
            Amitai,G. and Sorek,R.
  TITLE     Systematic discovery of antiphage defense systems in the microbial
            pangenome
  JOURNAL   Science 359 (6379) (2018)
   PUBMED   29371424
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039513.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18982.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Bradyrhizobium australiense"
                     /db_xref="taxon:2721161"
     Protein         1..444
                     /product="Wadjet anti-phage system protein JetA family
                     protein"
                     /calculated_mol_wt=50028
     Region          2..436
                     /region_name="DUF5716"
                     /note="Family of unknown function (DUF5716); pfam18982"
                     /db_xref="CDD:465940"
ORIGIN      
        1 mrlyervysa riletplree vvkqieigls efgigsmgel segdpeedqt tsqahylayy
       61 rlrdtgwlte etekwrtyvd mnpdafmvlg aitdfgnsrv rvagavvdvk nnleaanrep
      121 etmaqglana hdtalrfars mrrilagmre iedrilgnpn aaailrtffq dfvdglliad
      181 ykqlktsnnp yrhrrtiasl agdmladaal lgkiarayie qgvmapgati ataeervvae
      241 lekiksvfed vgpfmdkied frdrlerrir ttvhymdvmg egsaerivrl ieqlskigsd
      301 eveirlrspd vglpitslal ytppppkapp ertrfkvpkq dpylrayvqa ttefdrmvrv
      361 sdqkllefar rqmqgrdavs saeieiesip dlfayralpn laavgrsvrl geftitleee
      421 rtandwidvt afriertrts adaa
//
LOCUS       WP_235976823             148 aa            linear   BCT 02-MAR-2025
DEFINITION  phasin family protein [Bradyrhizobium archetypum].
ACCESSION   WP_235976823
VERSION     WP_235976823.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium archetypum
  ORGANISM  Bradyrhizobium archetypum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020918.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09361.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Bradyrhizobium archetypum"
                     /db_xref="taxon:2721160"
     Protein         1..148
                     /product="phasin family protein"
                     /calculated_mol_wt=15942
     Region          35..131
                     /region_name="Phasin_2"
                     /note="Phasin protein; cl11491"
                     /db_xref="CDD:472203"
ORIGIN      
        1 mkatngtnaf fgmplldfsk ialpgiggne qvlaraqegf ekirtasdem tealretwss
       61 narsatdygm kvfelsnana asaldflihl casksaadvf tlsaaqtrka fetasdqnre
      121 lwtlaqklat etgepvrkhf skvlhkag
//
LOCUS       WP_235976897              59 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3072 domain-containing protein [Bradyrhizobium archetypum].
ACCESSION   WP_235976897
VERSION     WP_235976897.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium archetypum
  ORGANISM  Bradyrhizobium archetypum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022716.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11272.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..59
                     /organism="Bradyrhizobium archetypum"
                     /db_xref="taxon:2721160"
     Protein         1..59
                     /product="DUF3072 domain-containing protein"
                     /calculated_mol_wt=6425
ORIGIN      
        1 msrlpdqada pmtprqsaml rslsaeayqp klfaknltar eaerriaalr aeielansv
//
LOCUS       WP_235976989             164 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-binding dehydrogenase [Bradyrhizobium archetypum].
ACCESSION   WP_235976989
VERSION     WP_235976989.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium archetypum
  ORGANISM  Bradyrhizobium archetypum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00107.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Bradyrhizobium archetypum"
                     /db_xref="taxon:2721160"
     Protein         1..164
                     /product="zinc-binding dehydrogenase"
                     /calculated_mol_wt=17519
     Region          <10..150
                     /region_name="Tdh"
                     /note="Threonine dehydrogenase or related Zn-dependent
                     dehydrogenase [Amino acid transport and metabolism,
                     General function prediction only]; COG1063"
                     /db_xref="CDD:440683"
ORIGIN      
        1 mlagtdcnra spviltgshs rrlninheda vevvkqltgg vgadyaveca gseatinqai
       61 hmanrggkvs laafphdpvt idlahlvknn vyaygirgeg rsatrramal maekrfdatk
      121 iythtfaltd lptalryare riddaievvv snreadtiad aaae
//
LOCUS       WP_235977107             648 aa            linear   BCT 02-MAR-2025
DEFINITION  isoaspartyl peptidase/L-asparaginase [Sandaracinobacteroides
            hominis].
ACCESSION   WP_235977107
VERSION     WP_235977107.1
KEYWORDS    RefSeq.
SOURCE      Sandaracinobacteroides hominis
  ORGANISM  Sandaracinobacteroides hominis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandaracinobacteroides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013292.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01112.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Sandaracinobacteroides hominis"
                     /db_xref="taxon:2780086"
     Protein         1..648
                     /product="isoaspartyl peptidase/L-asparaginase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=67785
     Region          66..328
                     /region_name="CphB"
                     /note="Cyanophycinase and related exopeptidases [Secondary
                     metabolites biosynthesis, transport and catabolism,
                     General function prediction only]; COG4242"
                     /db_xref="CDD:443384"
     Region          342..643
                     /region_name="IaaA"
                     /note="Isoaspartyl peptidase or L-asparaginase,
                     Ntn-hydrolase superfamily [Amino acid transport and
                     metabolism]; COG1446"
                     /db_xref="CDD:441055"
ORIGIN      
        1 mmglrvpavl mwfvaaltlg lmpaaaqaep rqkpveqymi gkrsaptpgp vsggllllgg
       61 gdrdhdamrw ffgkagnghi vilrasqggq igeefytglg giqsaetfvf hdrapasdpk
      121 ilerlrkadg ifiaggdqhr yvrfwkgtpl aevldahvaa gkplagtsag lailgekvys
      181 asdggltsaq amadpfgksq niesdflhia llrgmltdth fkergrlgrl maylakeqat
      241 lpdtapslfg lgidesaala vepdgsgrih atapgggawl vegsdlradr vgkgapldap
      301 rvrvtgidvn svvhlpegkv drpafvhsya vrggevvqvp awslavhgga gvieradmsp
      361 ekarayragl dealraggav ldkggtalda tqaavriled nplfnagrgs vftaegrnel
      421 daaimdgktq kagavagvtr trhpidlara vmdlsphvml agagadqfsv ekgleqvdps
      481 wfrtearwqq llawrrkqaa avdpthlfgt vgavaldseg nlaaststgg mtgkrwgrig
      541 dspiigagty akngqcavsa tgsgeyfire saarqvcdrv awkgetlana aqatiksvga
      601 iggdggliam gpdgrpvfai ndlgmyrgri tagkqpetai fadekfpd
//
LOCUS       WP_235977142             106 aa            linear   BCT 02-MAR-2025
DEFINITION  cupredoxin domain-containing protein [Bradyrhizobium archetypum].
ACCESSION   WP_235977142
VERSION     WP_235977142.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium archetypum
  ORGANISM  Bradyrhizobium archetypum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024864.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13473.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Bradyrhizobium archetypum"
                     /db_xref="taxon:2721160"
     Protein         1..106
                     /product="cupredoxin domain-containing protein"
                     /calculated_mol_wt=11170
     Region          26..104
                     /region_name="Cupredoxin"
                     /note="Cupredoxin superfamily; cl19115"
                     /db_xref="CDD:473140"
ORIGIN      
        1 mmpgrcpplv valllgamav paqaatiqit idnlvfapae vaakvgdtie winkdvlvht
       61 atarngdfdv itppkktvts vltkagaiey ycryhpnmka vltiap
//
LOCUS       WP_235977232             369 aa            linear   BCT 02-MAR-2025
DEFINITION  phytase [Sandaracinobacteroides hominis].
ACCESSION   WP_235977232
VERSION     WP_235977232.1
KEYWORDS    RefSeq.
SOURCE      Sandaracinobacteroides hominis
  ORGANISM  Sandaracinobacteroides hominis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandaracinobacteroides.
REFERENCE   1  (residues 1 to 369)
  AUTHORS   Ha,N.C., Oh,B.C., Shin,S., Kim,H.J., Oh,T.K., Kim,Y.O., Choi,K.Y.
            and Oh,B.H.
  TITLE     Crystal structures of a novel, thermostable phytase in partially
            and fully calcium-loaded states
  JOURNAL   Nat Struct Biol 7 (2), 147-153 (2000)
   PUBMED   10655618
REFERENCE   2  (residues 1 to 369)
  AUTHORS   Kerovuo,J., Lauraeus,M., Nurminen,P., Kalkkinen,N. and
            Apajalahti,J.
  TITLE     Isolation, characterization, molecular gene cloning, and sequencing
            of a novel phytase from Bacillus subtilis
  JOURNAL   Appl Environ Microbiol 64 (6), 2079-2085 (1998)
   PUBMED   9603817
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014396.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02333.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Sandaracinobacteroides hominis"
                     /db_xref="taxon:2780086"
     Protein         1..369
                     /product="phytase"
                     /GO_function="GO:0016158 - 3-phytase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=39194
     Region          26..365
                     /region_name="Phy"
                     /note="3-phytase (myo-inositol-hexaphosphate
                     3-phosphohydrolase) [Lipid transport and metabolism];
                     COG4247"
                     /db_xref="CDD:443389"
ORIGIN      
        1 melrtlapva llalaacgqq kaaepapaqv erittvavpa aaetivadnp tvdaddpvlw
       61 rdpadparal wigtdkskgl yvhdlqgkml qffavgpmnn vdqrsftagg kpqvlvaaad
      121 rgvygvrtwl ldpvtlklsr wghmpteaaf gepygfcmgq fggetfvian nksgaihaya
      181 vsqrkdgkpa mtpkgqwkvs sqtegcvvnd atgdlyvgee dvgiwrmslk dpkaapvqii
      241 svdgkrlvad vegltimrdg srsfliassq gdsaypvwem kdggyqwigr fkvaggaidp
      301 atetdgldaw sgpiagypeg aiamhdtcdg dgpndpdaav ctadakqqny klvdwrdvkk
      361 algiasstr
//
LOCUS       WP_235977310             452 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 N-terminal domain-containing protein
            [Bradyrhizobium archetypum].
ACCESSION   WP_235977310
VERSION     WP_235977310.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium archetypum
  ORGANISM  Bradyrhizobium archetypum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 452)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00933.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Bradyrhizobium archetypum"
                     /db_xref="taxon:2721160"
     Protein         1..452
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=49426
     Region          120..>443
                     /region_name="BglX"
                     /note="Periplasmic beta-glucosidase and related
                     glycosidases [Carbohydrate transport and metabolism];
                     COG1472"
                     /db_xref="CDD:441081"
ORIGIN      
        1 mvmvmapema vamampeama mpmtvtvama vttagesrgw drqrcrgkre sadggrddll
       61 danhgvlltc sagialrccn lkapilvrcd qhhpagmvgh rvtsddlpnl nrvpkastmr
      121 igelfilgff gntvpdwlke faaryglggv ilfdyscrtq aydnniespe qvqrlcaeis
      181 alpsgpmvfi dqegglvrrl kesrgfaplp sakefnhlap dekrailaas faemrrlgih
      241 ydfapvidvd ynpdnpnigr ikrsysadia evkgnallas evaraqrigl clkhfpgigg
      301 avvdshhefm disdalraeq eelfyslapk mfgnavlvsh aivrqwdqeh pmtlsatglg
      361 rlrgrlpdtl litddmqmqg lqkalgtrqa slqslkagmd mlcignnlfd qeqemigtae
      421 yirqslrdgi lsssaieqss arivqrkall ta
//
LOCUS       WP_235976750             141 aa            linear   BCT 02-MAR-2025
DEFINITION  ClpXP protease specificity-enhancing factor SspB [Bradyrhizobium
            archetypum].
ACCESSION   WP_235976750
VERSION     WP_235976750.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium archetypum
  ORGANISM  Bradyrhizobium archetypum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   Bohn,C., Binet,E. and Bouloc,P.
  TITLE     Screening for stabilization of proteins with a trans-translation
            signature in Escherichia coli selects for inactivation of the ClpXP
            protease
  JOURNAL   Mol Genet Genomics 266 (5), 827-831 (2002)
   PUBMED   11810257
REFERENCE   2  (residues 1 to 141)
  AUTHORS   Flynn,J.M., Levchenko,I., Seidel,M., Wickner,S.H., Sauer,R.T. and
            Baker,T.A.
  TITLE     Overlapping recognition determinants within the ssrA degradation
            tag allow modulation of proteolysis
  JOURNAL   Proc Natl Acad Sci U S A 98 (19), 10584-10589 (2001)
   PUBMED   11535833
REFERENCE   3  (residues 1 to 141)
  AUTHORS   Levchenko,I., Seidel,M., Sauer,R.T. and Baker,T.A.
  TITLE     A specificity-enhancing factor for the ClpXP degradation machine
  JOURNAL   Science 289 (5488), 2354-2356 (2000)
   PUBMED   11009422
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016286.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04386.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Bradyrhizobium archetypum"
                     /db_xref="taxon:2721160"
     Protein         1..141
                     /product="ClpXP protease specificity-enhancing factor
                     SspB"
                     /calculated_mol_wt=15709
     Region          <66..>134
                     /region_name="SspB2"
                     /note="SspB-like protein, predicted to bind SsrA peptide
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG3814"
                     /db_xref="CDD:443026"
ORIGIN      
        1 mettgrgvpv tpqrramtis reaillllai lipitpafae pcskpasrsk iaetlklase
       61 qrpvnitfrt gaegvklsvg lkskypddmt iilqqdfeql nikedrfevl mrfmgnrerl
      121 tvpfnaikaf wdkselkcsd g
//
LOCUS       WP_235977443             537 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Sandaracinobacteroides hominis].
ACCESSION   WP_235977443
VERSION     WP_235977443.1
KEYWORDS    RefSeq.
SOURCE      Sandaracinobacteroides hominis
  ORGANISM  Sandaracinobacteroides hominis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingosinicellaceae; Sandaracinobacteroides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Sandaracinobacteroides hominis"
                     /db_xref="taxon:2780086"
     Protein         1..537
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=57769
     Region          2..525
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(13..14,17..18,21,59,117..118,120..122,125,145,
                     148..149,152,238,241..242,245..247,250,278,282,451..452,
                     456,460,476,479..480,483..484,487)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mvilasslgt vfewydfyly gllatiitvq ffsgvnettg filalaafaa gfavrpfgal
       61 vfgrlgdmvg rkytflvtmg lmgaatfavg llpgyaaigv aapillvllr mlqglalgge
      121 yggaatyvae hapdgkrgfh tsfiqttatl glflallivi gtrlavgeea frdwgwripf
      181 lvsvlllgvs lwirmqlees pvfkkmkaeg ttskkpltea fgqwsnlkiv lialfgavtg
      241 qavvwytgqf yalfylekml rvdgattnil iaialaiatp gflffgwlsd rigrkpiima
      301 glllaaityf plfnalqhfa npaqfeaqeh apvtvsadpk tcsvqfdpig ktrfdgtgcd
      361 iaksflakag vsysnihtpg vgsgatisvg wktleiadpt glsdaeraal irnfgksaal
      421 tlqaagypdk adparinkpm vvailtilvl yvtmvygpia allvelfpsr irytsmslpy
      481 higngwfggf lptiafamva atgdisfglw ypilvagltf vigmiwlpet frrkieh
//
LOCUS       WP_235977465             113 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Streptococcus pneumoniae].
ACCESSION   WP_235977465
VERSION     WP_235977465.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         1..113
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=12611
     Region          <3..104
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 miphitrsha iihpsvygeg msnvllenas sgrvlittdn pgckeivkdr etgyifqggn
       61 veelvsilev flglenekrk emglqgrmyi eqyfsrqiii dayldkikga lde
//
LOCUS       WP_235977589             284 aa            linear   BCT 02-MAR-2025
DEFINITION  replication protein [Spirabiliibacterium pneumoniae].
ACCESSION   WP_235977589
VERSION     WP_235977589.1
KEYWORDS    RefSeq.
SOURCE      Spirabiliibacterium pneumoniae
  ORGANISM  Spirabiliibacterium pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Spirabiliibacterium.
REFERENCE   1  (residues 1 to 284)
  AUTHORS   Zylicz,M., Gorska,I., Taylor,K. and Georgopoulos,C.
  TITLE     Bacteriophage lambda replication proteins: formation of a mixed
            oligomer and binding to the origin of lambda DNA
  JOURNAL   Mol Gen Genet 196 (3), 401-406 (1984)
   PUBMED   6239082
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016381.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04492.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Spirabiliibacterium pneumoniae"
                     /db_xref="taxon:221400"
     Protein         1..284
                     /product="replication protein"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /calculated_mol_wt=32089
     Region          12..90
                     /region_name="Phage_rep_O"
                     /note="Bacteriophage replication protein O; cl04545"
                     /db_xref="CDD:471049"
ORIGIN      
        1 msndrfipns fqipnslvde llselsgael kcylvtirkt kgwqkesdai sisqfmevtg
       61 lsnravidac srlveigllv kssgsrntsv ysanlckkft seesspvkkv hstceesspv
      121 kkvhstcees sqdpvkkvht qnnnknttkk tnsssekksa dkkfkftddd ikaakyilek
      181 iksiqpnfke pdnldnwane irlmrerdnr nlreicklfa wanndpfwqs nilspkklre
      241 kwdqlylksi ainnakqasn sfdpkqsggw shgktikigg syer
//
LOCUS       WP_235977564             224 aa            linear   BCT 02-MAR-2025
DEFINITION  phage protein Gp37 [Spirabiliibacterium pneumoniae].
ACCESSION   WP_235977564
VERSION     WP_235977564.1
KEYWORDS    RefSeq.
SOURCE      Spirabiliibacterium pneumoniae
  ORGANISM  Spirabiliibacterium pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Spirabiliibacterium.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Pell,L.G., Liu,A., Edmonds,L., Donaldson,L.W., Howell,P.L. and
            Davidson,A.R.
  TITLE     The X-ray crystal structure of the phage lambda tail terminator
            protein reveals the biologically relevant hexameric ring structure
            and demonstrates a conserved mechanism of tail termination among
            diverse long-tailed phages
  JOURNAL   J Mol Biol 389 (5), 938-951 (2009)
   PUBMED   19426744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020447.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08873.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Spirabiliibacterium pneumoniae"
                     /db_xref="taxon:221400"
     Protein         1..224
                     /product="phage protein Gp37"
                     /calculated_mol_wt=24755
     Region          10..194
                     /region_name="Phage_Mu_Gp37"
                     /note="Bacteriophage Mu, Gp37; cl02087"
                     /db_xref="CDD:470459"
ORIGIN      
        1 mvtqgylavi srienalver lqlglgklar rvesyggeld dpklnllnlp avlvtyggsr
       61 fermgvsars yrikasdkfi vivlvrslrs ekagrhggvt ereiganqli savkrllinq
      121 tlgqlvepie iaevralfnq apvqnsalta yaiefdirys qsdflddgkf peptadinsp
      181 dylfnryqgk lsapdaelrt legklfdptn aaqvpfeiet kekt
//
LOCUS       WP_235977739             290 aa            linear   BCT 02-MAR-2025
DEFINITION  pseudouridine synthase [Flavimobilis rhizosphaerae].
ACCESSION   WP_235977739
VERSION     WP_235977739.1
KEYWORDS    RefSeq.
SOURCE      Flavimobilis rhizosphaerae
  ORGANISM  Flavimobilis rhizosphaerae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Jonesiaceae; Flavimobilis.
REFERENCE   1  (residues 1 to 290)
  AUTHORS   Wrzesinski,J., Nurse,K., Bakin,A., Lane,B.G. and Ofengand,J.
  TITLE     A dual-specificity pseudouridine synthase: an Escherichia coli
            synthase purified and cloned on the basis of its specificity for
            psi 746 in 23S RNA is also specific for psi 32 in tRNA(phe)
  JOURNAL   RNA 1 (4), 437-448 (1995)
   PUBMED   7493321
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013045.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00849.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Flavimobilis rhizosphaerae"
                     /db_xref="taxon:2775421"
     Protein         1..290
                     /product="pseudouridine synthase"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /GO_process="GO:0001522 - pseudouridine synthesis
                     [Evidence IEA]"
                     /GO_process="GO:0009451 - RNA modification [Evidence IEA]"
                     /calculated_mol_wt=31786
     Region          39..285
                     /region_name="PseudoU_synth"
                     /note="Pseudouridine synthases catalyze the isomerization
                     of specific uridines in an RNA molecule to pseudouridines
                     (5-ribosyluracil, psi); cl00130"
                     /db_xref="CDD:469624"
     Site            order(125..128,228)
                     /site_type="active"
                     /db_xref="CDD:211324"
ORIGIN      
        1 mnptrlalpr eeawgslvsy learfpadaa rlreqvaage vvdelgrpfa ldspypaggl
       61 aylyrdvape arvpfevevl hrdddlvvvd kphflavtpr gawvtetvlv rlrraldlpa
      121 lspahrldrp tagvlvlttr pevrgayqel farravekvy eavvtlpagl elpttvrsri
      181 vkqhgvhqar tvpgevnait hvtlqrelpg gralvglrpe tgrthqlrvh laglgapivg
      241 ddlypverev apddysaplq llarsiafdd pltgerrefa srrtldatgd
//
LOCUS       WP_235977784             108 aa            linear   BCT 02-MAR-2025
DEFINITION  FimD/PapC C-terminal domain-containing protein [Proteus mirabilis].
ACCESSION   WP_235977784
VERSION     WP_235977784.1
KEYWORDS    RefSeq.
SOURCE      Proteus mirabilis
  ORGANISM  Proteus mirabilis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Proteus.
REFERENCE   1  (residues 1 to 108)
  AUTHORS   Ford,B., Rego,A.T., Ragan,T.J., Pinkner,J., Dodson,K.,
            Driscoll,P.C., Hultgren,S. and Waksman,G.
  TITLE     Structural homology between the C-terminal domain of the PapC usher
            and its plug
  JOURNAL   J Bacteriol 192 (7), 1824-1831 (2010)
   PUBMED   20118254
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025319.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13953.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Proteus mirabilis"
                     /db_xref="taxon:584"
     Protein         1..108
                     /product="FimD/PapC C-terminal domain-containing protein"
                     /calculated_mol_wt=12317
     Region          <11..107
                     /region_name="PRK15213"
                     /note="outer membrane usher protein PefC"
                     /db_xref="CDD:237926"
ORIGIN      
        1 mlnylilfki ftpadkaiiy refkystiqr yilriknkng dfisagsavr nkndeyigfv
       61 snsgvlllnl ldkpnklfvi spngekctln lekvesndhk imeiecne
//
LOCUS       WP_235977878             120 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Proteus mirabilis].
ACCESSION   WP_235977878
VERSION     WP_235977878.1
KEYWORDS    RefSeq.
SOURCE      Proteus mirabilis
  ORGANISM  Proteus mirabilis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Proteus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Proteus mirabilis"
                     /db_xref="taxon:584"
     Protein         1..120
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=14574
     Region          1..>68
                     /region_name="PRK15121"
                     /note="MDR efflux pump AcrAB transcriptional activator
                     RobA"
                     /db_xref="CDD:185076"
ORIGIN      
        1 mhktkstiak yilsrklsms aillkltrys iseisndysf tsqqnfsraf kryfkvtpef
       61 yrkskfwdfr yyrpqhkvfy fkkincqliy lskdrlldnn sddfkflifl flltlsqilq
//
LOCUS       WP_235977899             138 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Proteus mirabilis].
ACCESSION   WP_235977899
VERSION     WP_235977899.1
KEYWORDS    RefSeq.
SOURCE      Proteus mirabilis
  ORGANISM  Proteus mirabilis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Proteus.
REFERENCE   1  (residues 1 to 138)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Proteus mirabilis"
                     /db_xref="taxon:584"
     Protein         1..138
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=15208
     Region          4..>121
                     /region_name="FixJ"
                     /note="DNA-binding response regulator, FixJ family,
                     consists of REC and HTH domains [Signal transduction
                     mechanisms, Transcription]; COG4566"
                     /db_xref="CDD:443623"
ORIGIN      
        1 mesiihlitf eddstkvqlk avlsslaanv ktysneqafl kyyfsstkga hkeciiintk
       61 ssaspsialv kelnklknii pviiisgdas iescrnafka gafeyltrpl nvnellnivs
      121 esfytmkvrl snsepifl
//
LOCUS       WP_235977916             427 aa            linear   BCT 02-MAR-2025
DEFINITION  gp53-like domain-containing protein [Proteus mirabilis].
ACCESSION   WP_235977916
VERSION     WP_235977916.1
KEYWORDS    RefSeq.
SOURCE      Proteus mirabilis
  ORGANISM  Proteus mirabilis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Proteus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047045.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21882.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Proteus mirabilis"
                     /db_xref="taxon:584"
     Protein         1..427
                     /product="gp53-like domain-containing protein"
                     /calculated_mol_wt=47550
ORIGIN      
        1 mtkifkipfa tqgdktvvpv eiqtdgsvsy tqgygydyer dqvtdpaakd ierekmnslf
       61 hditesigem qlqgfakwse agkpyairsv vyhnnkvwqs kiennniepi agnawaelka
      121 ditanevgay nkaeadkrfq pvgkyqaegy syakaesdtk yqpkgnyapa gnyankgdsy
      181 tkaesdgkyq pkgnyqasgd yatntnlkne lnkkfdkgni sqatgtstah visqkaatda
      241 fqpkgnyqpk gnyalvgasy tktesdnkyq pkgnylatgy sysktesdnk yqpkgnylat
      301 gysyskgesd gkyqpkgnys vknqakktdn gwwkcgdtgi iyqwgnsgsi prdsdkiltf
      361 pllfpnkcls viavsnkrny dpynngvsvi nltnknftit hqsyessyyw faigfdihia
      421 ekysiki
//
LOCUS       WP_235977694             616 aa            linear   BCT 02-MAR-2025
DEFINITION  tail fiber protein [Spirabiliibacterium pneumoniae].
ACCESSION   WP_235977694
VERSION     WP_235977694.1
KEYWORDS    RefSeq.
SOURCE      Spirabiliibacterium pneumoniae
  ORGANISM  Spirabiliibacterium pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Spirabiliibacterium.
REFERENCE   1  (residues 1 to 616)
  AUTHORS   Thomassen,E., Gielen,G., Schutz,M., Schoehn,G., Abrahams,J.P.,
            Miller,S. and van Raaij,M.J.
  TITLE     The structure of the receptor-binding domain of the bacteriophage
            T4 short tail fibre reveals a knitted trimeric metal-binding fold
  JOURNAL   J Mol Biol 331 (2), 361-373 (2003)
   PUBMED   12888344
REFERENCE   2  (residues 1 to 616)
  AUTHORS   Cubo,M.T., Economou,A., Murphy,G., Johnston,A.W. and Downie,J.A.
  TITLE     Molecular characterization and regulation of the
            rhizosphere-expressed genes rhiABCR that can influence nodulation
            by Rhizobium leguminosarum biovar viciae
  JOURNAL   J Bacteriol 174 (12), 4026-4035 (1992)
   PUBMED   1597418
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07484.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Spirabiliibacterium pneumoniae"
                     /db_xref="taxon:221400"
     Protein         1..616
                     /product="tail fiber protein"
                     /calculated_mol_wt=67216
     Region          155..236
                     /region_name="pyocin_knob"
                     /note="knob domain of R1 and R2 pyocins and similar
                     domains; cd19958"
                     /db_xref="CDD:410997"
     Site            order(155,170..172,174,192,194,196..197,201..202,207..209,
                     211..213,217..218,220..222,225,230,233..236)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:410997"
     Region          464..511
                     /region_name="Collar"
                     /note="Phage Tail Collar Domain; pfam07484"
                     /db_xref="CDD:429485"
ORIGIN      
        1 manlkeqskw eegiyqieen dpvvggadgi snkqakqlan rttylkkele kpattkqvgr
       61 vqlvddlttn dnskaltakq gftlkgfids ltrnlgnyip nskksnains pssdtvatsa
      121 aaktaydrgt qgistanavg vrvskleaet wkfdqkilsn gadlndirep gfyrktanah
      181 tmkneptpsa fdmlvmsiqg dntnfakqlv feyytnrifs rvikdgknig kwervdsldn
      241 vpntggsitg dvdikanlkv rdiypadgan gwldlrgdgg kgvalysgst rallatntat
      301 vlntpistnn nmyifnyegd dtsnpsssgn vdgfwwedss ntiyfqgdrp hksktdlrtt
      361 lkakefeten gsklstafrg dssqsvdtgn sysystvysv nggkvppnay nygvgmflsg
      421 agtnadvyfp hiegkdtefw lrtnfsnsrf snwtrfisae fmvgipipyp kgdvptgfla
      481 mngqsfnpkt ypelakkypn nklpdlrgef irgwdngrga drgrnilsfq nfamqniagt
      541 lsvrpgdkgy spviygasgv fkkidklgse kwggavinds smslggainf daslvvktan
      601 etrprnvafq yiclag
//
LOCUS       WP_235978055             247 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Flavimobilis
            rhizosphaerae].
ACCESSION   WP_235978055
VERSION     WP_235978055.1
KEYWORDS    RefSeq.
SOURCE      Flavimobilis rhizosphaerae
  ORGANISM  Flavimobilis rhizosphaerae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Jonesiaceae; Flavimobilis.
REFERENCE   1  (residues 1 to 247)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 247)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Flavimobilis rhizosphaerae"
                     /db_xref="taxon:2775421"
     Protein         1..247
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=25808
     Region          1..244
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(7,9..10,12,31..33,78..80,129..131,144,148,174..177)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(103,131,144,148)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mravvtgass gigratvell raagwevfal arradrlsel atrtgatavv cdvtddasva
       61 aavarvtadg plnavvnvag galgtdsvad adldrwrrmy etnvlgtlrl trallpslre
      121 sgrgdvvvlt staahdtypg gagyvaakha erviastlrl elvgepvrvi eiapgmvate
      181 efslvrydgd aekaaavyag vdsplvaedv adaivwtltr phhvnidsmi irpraqasnt
      241 lvarrea
//
LOCUS       WP_235978172             726 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Streptomyces
            lycii].
ACCESSION   WP_235978172
VERSION     WP_235978172.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces lycii
  ORGANISM  Streptomyces lycii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 726)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 726)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 726)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 726)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Streptomyces lycii"
                     /db_xref="taxon:2654337"
     Protein         1..726
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=74572
     Region          25..725
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
ORIGIN      
        1 mtpgrpagpg parirparra rgplrrvlpr arrflgarkr vlvtlggwsl lesahtflgg
       61 ygvaqaldrg fldgdpgtgl awlavaavai vvgglanrgv frgladlvep lrdgllrrvv
      121 gtalrdavad parsgdsavv srlthqteta rdsfaglvlv arsflftsag alaglaalap
      181 lllvvvlppl llglalflat llpmaarqqd ylradedlae aygavatglr dvvacgaedr
      241 aedrtgrlad aevraarsla rwaaartlsl gvagqlpvll lvlatpwllr ggvtagellg
      301 altyltqsll palqtlmtal gaagtrllvi ldrlmggade ertgpaaapr gpadpavapp
      361 ghplpevpps sarppsdppp sdlpspgpas papadpepaf repasgepap reparrgsap
      421 repalaprga altspgrapg rsgsprtpvr pafapvppap svpsapsaps assapsasat
      481 pgappvpave lrsvtfayga gahpvlrdld lavapgehlv vvgpsgigks tltglvagll
      541 vpdrgevrvg grparispsa adaarervli pqqayvftgt lrenllylcp dgapdaavla
      601 saeavglgpv aeriggldav vdpavlsqge rqlvalarah lapaplvlld eatchldpva
      661 eeraerafar rpgtlivvah rissarradr vlvmdgvhav cgrheelpar sdlyrdlvgr
      721 whtarl
//
LOCUS       WP_235978184             167 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein, partial [Streptomyces
            lycii].
ACCESSION   WP_235978184
VERSION     WP_235978184.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces lycii
  ORGANISM  Streptomyces lycii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024949.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13560.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Streptomyces lycii"
                     /db_xref="taxon:2654337"
     Protein         1..>167
                     /product="helix-turn-helix domain-containing protein"
     Region          17..73
                     /region_name="HTH_31"
                     /note="Helix-turn-helix domain; pfam13560"
                     /db_xref="CDD:433309"
     Site            order(23,27,52)
                     /site_type="other"
                     /note="non-specific DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238045"
     Site            order(26,51)
                     /site_type="active"
                     /note="salt bridge [active]"
                     /db_xref="CDD:238045"
     Site            order(33..34,45,48,52..53)
                     /site_type="other"
                     /note="sequence-specific DNA binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238045"
     Region          <90..166
                     /region_name="Trypan_PARP"
                     /note="Procyclic acidic repetitive protein (PARP);
                     pfam05887"
                     /db_xref="CDD:368653"
ORIGIN      
        1 mprwkplpde ldprvrelan rlreivdhsg lavsavadrt gygksswery ltgrllpprd
       61 avvalagvtg adpgglsdlw eradrawtlt earldglttg qqdpepesrp dprprsragl
      121 rpatgpglrp esrpesrpep rtaplpgtar paavapspdt tpspgav
//
LOCUS       WP_235978191             505 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase 53 family protein [Streptomyces lycii].
ACCESSION   WP_235978191
VERSION     WP_235978191.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces lycii
  ORGANISM  Streptomyces lycii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 505)
  AUTHORS   Coutinho,P.M., Deleury,E., Davies,G.J. and Henrissat,B.
  TITLE     An evolving hierarchical family classification for
            glycosyltransferases
  JOURNAL   J Mol Biol 328 (2), 307-317 (2003)
   PUBMED   12691742
REFERENCE   2  (residues 1 to 505)
  AUTHORS   Ryttersgaard,C., Lo Leggio,L., Coutinho,P.M., Henrissat,B. and
            Larsen,S.
  TITLE     Aspergillus aculeatus beta-1,4-galactanase: substrate recognition
            and relations to other glycoside hydrolases in clan GH-A
  JOURNAL   Biochemistry 41 (51), 15135-15143 (2002)
   PUBMED   12484750
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019365.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07745.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Streptomyces lycii"
                     /db_xref="taxon:2654337"
     Protein         1..505
                     /product="glycosyl hydrolase 53 family protein"
                     /GO_function="GO:0015926 - glucosidase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=53161
     Region          21..130
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; cl19911"
                     /db_xref="CDD:418717"
     Region          161..505
                     /region_name="GanB"
                     /note="Arabinogalactan endo-1,4-beta-galactosidase
                     [Carbohydrate transport and metabolism]; COG3867"
                     /db_xref="CDD:443076"
ORIGIN      
        1 mpalpaqaag apetasgspa nagfeadget aapsgwtsta rgnaagtaft epgghdggrr
       61 lthradhayr vetsqrltgl ddgpytvsaw vrssggqksa tialrdcgag sertqlppta
      121 dgawiritas aevrggscti altsdarpgq wahfdditlt pgaaalsvrg gdvstlakne
      181 afgaryrhad gteddalsvl gsagmnyarl kvwvdpvdgy ntkervlama qrirasgmql
      241 fvdfhysdaw adpgkqnkpa awsghsyqql rqdvydhtyd vlsalaaqgt pagmvqigne
      301 inggmlwpeg sidnwdqlag llksgaeaar aaspdtrial hlaeggdreg thwwfdrava
      361 hdvpfdvval syygywhgpl sglqanldat asrygkpvlv aetayahtle ngddlannvg
      421 tadqlvdgyp atpqgqaanl rdvmnvveav pggrglgvvy wepawtaveg sgwdpadpds
      481 gnawenqalf gyderalpal dlfap
//
LOCUS       WP_235978246             196 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6668 family protein [Streptomyces].
ACCESSION   WP_235978246
VERSION     WP_235978246.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042559.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20373.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..196
                     /product="DUF6668 family protein"
                     /calculated_mol_wt=20171
ORIGIN      
        1 mtmdspgata hgpeiwvrgp vapppraevp ppgaepgaga gpesaaapsp vpraggpawv
       61 sahggagast laavlggvds gnrwsdparg eprdvllvar thaagltals qwldlyrrge
      121 hppgveilga vlvadapgrl prqlaqrvkv igsvvnvhrv pwvptwrtgk ldgplpreig
      181 alarvlqkhy rpaeek
//
LOCUS       WP_235978267             416 aa            linear   BCT 02-MAR-2025
DEFINITION  VWA domain-containing protein [Streptomyces lycii].
ACCESSION   WP_235978267
VERSION     WP_235978267.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces lycii
  ORGANISM  Streptomyces lycii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 416)
  AUTHORS   Santiago,B., Schubel,U., Egelseer,C. and Meyer,O.
  TITLE     Sequence analysis, characterization and CO-specific transcription
            of the cox gene cluster on the megaplasmid pHCG3 of Oligotropha
            carboxidovorans
  JOURNAL   Gene 236 (1), 115-124 (1999)
   PUBMED   10433972
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017569.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05762.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Streptomyces lycii"
                     /db_xref="taxon:2654337"
     Protein         1..416
                     /product="VWA domain-containing protein"
                     /calculated_mol_wt=43951
     Region          174..370
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(244,246,248,303,329)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238739"
ORIGIN      
        1 maddalvagn gsgdgtdeer lrrwrlvlgg gadgtgyepg grdaamdrtl dalygdgpgg
       61 agggtgrgga gggrgragds ragglggsap qmarwlgdir tyfptsvvqv mqrdaidrlg
      121 lsqlllepel leaveadvhl vgtllslhka mpettrntar avvrkvvael ekrlatrtra
      181 tltgaldrsa rnsrprhrdi dwdrtiranl knylpehrtv vperlighgr aaqavkkdvv
      241 lcidqsgsma asvvhasvfg avlasmrsls trlvvfdtsv vdltdelddp vdvlfgtqlg
      301 ggtdinrala ycqsritrpa dtivvlisdl yeggirdeml krvaamkasg iqfvallals
      361 degtpgydre haaalaalga pafactpdlf pevmaaaiek rplpvpdtda dttrvr
//
LOCUS       WP_235978275             126 aa            linear   BCT 02-MAR-2025
DEFINITION  Rv3235 family protein, partial [Streptomyces lycii].
ACCESSION   WP_235978275
VERSION     WP_235978275.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces lycii
  ORGANISM  Streptomyces lycii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039460.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20060.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Streptomyces lycii"
                     /db_xref="taxon:2654337"
     Protein         <1..126
                     /product="Rv3235 family protein"
     Region          12..112
                     /region_name="DUF6459"
                     /note="Family of unknown function (DUF6459); pfam20060"
                     /db_xref="CDD:466277"
ORIGIN      
        1 paahrrelrp rhwfanrlll tlsgqkpvhw mlghtvgqay eqlvrlaplt plrppagrrg
       61 apvvarcdey rpephvieaf ariltgervq alafrlehga dgrwrcsavd lgfdpaapvt
      121 aatagr
//
LOCUS       WP_235978285             278 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: SAM-dependent methyltransferase [Streptomyces].
ACCESSION   WP_235978285
VERSION     WP_235978285.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
REFERENCE   1  (residues 1 to 278)
  AUTHORS   Rutherford,K., Parson,W.W. and Daggett,V.
  TITLE     The histamine N-methyltransferase T105I polymorphism affects active
            site structure and dynamics
  JOURNAL   Biochemistry 47 (3), 893-901 (2008)
   PUBMED   18154359
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016550.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04672.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..278
                     /product="SAM-dependent methyltransferase"
                     /EC_number="2.1.1.-"
                     /calculated_mol_wt=29866
     Region          12..260
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
ORIGIN      
        1 maenmswtqq dpgfsppeid ttrpsvarvy davlggkdny pvdrelteql maafpdggrg
       61 avinramlgr avrhmsgagi dqfldlgsgl ptvqntheia qsanprakvv yvdndpivla
      121 hgnalladnr stavvagdlr eperifahsg vsdaldlrrp vglimnaviq hvldeedpvg
      181 iigrykemma pgsylllthf csstpearrl esvllqalgr gqlrsmaqia gffegleite
      241 pgvvylpywr pdepvaapld isgllygggl grkpggee
//
LOCUS       WP_235978394             543 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GMC family oxidoreductase N-terminal
            domain-containing protein [Streptomyces].
ACCESSION   WP_235978394
VERSION     WP_235978394.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012935.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00732.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..543
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /GO_function="GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=57569
     Region          54..537
                     /region_name="BetA"
                     /note="Choline dehydrogenase or related flavoprotein
                     [Lipid transport and metabolism, General function
                     prediction only]; COG2303"
                     /db_xref="CDD:441878"
ORIGIN      
        1 mttpttrrrf ltaaalgaaa gggvltapaa raaapgtgvr pgrvpltree hravvigsgf
       61 gggvtalrla qagvpvtvle rgrrwvtgpg vdtyatvsrp drrllwygtt peavrpvqrl
      121 vggpldldpy vgvvepvlgd sllavcaagv gggslvyqgm tlqpsrevfe twmpgewdyg
      181 rldreyyprv armlrvspap dellatptyr aarifrdrae rrgfpvekvp lpvdwdypla
      241 etrgemkpay tsgdttfgin nggkhtvdvt ylaqaeatgr crvlpqhrvt svargtggrw
      301 tvhvdridea grvleqkilt tnalvmaags inttrllvra aalggipglp ddvgrgfgtn
      361 gdrlylwtdl vddfgarqgs pvtyvaktwd eprtattvcq fsvpplygin trstlvlama
      421 vspdrgrwty ngltdtvnmh fpvtgdrais ltsarrvqai aaglgtvani nlavnftvhp
      481 lggactgpva dpygrvhgqp glyvldgali pgttaacnps mtiaavaeqa lddivakdvg
      541 tti
//
LOCUS       WP_235978433             101 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF5955 family protein [Streptomyces].
ACCESSION   WP_235978433
VERSION     WP_235978433.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039604.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19380.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..101
                     /product="DUF5955 family protein"
                     /calculated_mol_wt=10499
     Region          4..91
                     /region_name="DUF5955"
                     /note="Family of unknown function (DUF5955); pfam19380"
                     /db_xref="CDD:437212"
ORIGIN      
        1 maggsgddpr leglrtavsr lrrelavhpa dlpdrlvaee elaaldamty sgvpevprlr
       61 rsllviagav gsvsalapal aevrqvidlf ggvpeprgkv h
//
LOCUS       WP_235978456              85 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Streptomyces lycii].
ACCESSION   WP_235978456
VERSION     WP_235978456.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces lycii
  ORGANISM  Streptomyces lycii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Streptomyces lycii"
                     /db_xref="taxon:2654337"
     Protein         1..85
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=9323
     Region          <14..85
                     /region_name="GlxA"
                     /note="Transcriptional regulator GlxA, contains an amidase
                     domain and an AraC-type DNA-binding HTH domain
                     [Transcription]; COG4977"
                     /db_xref="CDD:444002"
ORIGIN      
        1 mpnaqgfsgg plprqftehl gtgpgqwllr qhinaarvll eqtdlpveai atrvgrtsav
       61 dfrrrfraql gttpgvcrrt fsqpr
//
LOCUS       WP_235978392             264 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: aspartate dehydrogenase domain-containing protein
            [Streptomyces].
ACCESSION   WP_235978392
VERSION     WP_235978392.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
REFERENCE   1  (residues 1 to 264)
  AUTHORS   Yang,Z., Savchenko,A., Yakunin,A., Zhang,R., Edwards,A.,
            Arrowsmith,C. and Tong,L.
  TITLE     Aspartate dehydrogenase, a novel enzyme identified from structural
            and functional studies of TM1643
  JOURNAL   J Biol Chem 278 (10), 8804-8808 (2003)
   PUBMED   12496312
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014063.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01958.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..264
                     /product="aspartate dehydrogenase domain-containing
                     protein"
                     /GO_function="GO:0033735 - aspartate dehydrogenase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=27190
     Region          5..251
                     /region_name="AspD"
                     /note="L-aspartate dehydrogenase, NAD(P)-dependent [Amino
                     acid transport and metabolism]; COG1712"
                     /db_xref="CDD:441318"
ORIGIN      
        1 msaplrigiv gwgaigrvvg talaagvvpg aeltrvtdnr srpdapvpqs aiaealevcd
       61 liveaaghaf vrewgaqvla sgtdllvast galtddalaa elhatgpgrv yftggavggl
      121 dllqavrglg dltevrltts klpgtleqpw mdaellerlr tceepvevmc gtardvparf
      181 prstnvaasv alavgnpdkv evrviadpga tltrhvveaa gphghyrfev nhapdpanpa
      241 tsqvvphavl rgigaltgrk gqil
//
LOCUS       WP_235978595            1011 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Streptomyces
            lycii].
ACCESSION   WP_235978595
VERSION     WP_235978595.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces lycii
  ORGANISM  Streptomyces lycii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Streptomyces lycii"
                     /db_xref="taxon:2654337"
     Protein         1..1011
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=105674
     Region          342..>564
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     Region          <574..950
                     /region_name="COG3903"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443109"
     Region          <852..992
                     /region_name="CsgD"
                     /note="DNA-binding transcriptional regulator, CsgD family
                     [Transcription]; COG2771"
                     /db_xref="CDD:442052"
     Region          936..992
                     /region_name="HTH_LUXR"
                     /note="helix_turn_helix, Lux Regulon; smart00421"
                     /db_xref="CDD:197715"
ORIGIN      
        1 mfawlcelsr rrplvvcvdd ahlldpasra algfaarrlg grrpvvllla vaqehadape
       61 fagvpalrla pladahagal ldgllpedaa pavreallhe grgnpqlltd lvagldtdrl
      121 tgvaplpepl pahgpllryg verirelpad trlllllaaa ahecagpata vgadillgaa
      181 rraglpaagl epaetarvvl tegdtvrfah pvlrraayga eplarrraah alladefdah
      241 gpalrlpalr hraaaahgvd aeladaleda vaavpdaara htdsaaalar aaeltsdpdv
      301 rvrrlaaaae hawlsgrphr artlldaarr lpageavrgr aelvrgilel rdgvvtdare
      361 vllhaaglle rhdpaaarqa lldaaeatwt vgdvtgylsd taraagigda edaegaaaad
      421 rapapgdata ahdataaedv pagdgrdlrg vrgctedapa aagrgrrgrp dggertdgge
      481 rtdcgecadd gecaddgdrt dcgecaddre rtdgaiapdg rrrtdgrert dreqrpereq
      541 rtdreqrtdr eqrtdggars ggpfagycag mtavmsgrfd dgvkplrrvi eqaardddpr
      601 rliragvaal vlgevaaace lntralaaar vrglatlvpk alehlvyael ragrhtraha
      661 haleglraas gagqrncaah hhaalamtaa trgdtaecee haraaaavas phglgvaagl
      721 atwalaradl grglpreala rlrpligpgp gcghfalrmi ampclveaav lagepetara
      781 vlpefelwta vtadpqalpq ltrcrallav adeaaageqg saqpdgtags gaarsgvten
      841 gapgsgvtgs gaealfdhal elhdiadgdf erartqllyg kalrrkrrpg larehlrdal
      901 vafercraga wveqtraelr atgetsgaad dpeavrlltp qqlriarcva egatnrevav
      961 rlsvsprtvd hhlrnvfsal girsrvelar llthsragdg edgsggrarg r
//
LOCUS       WP_235978627             118 aa            linear   BCT 02-MAR-2025
DEFINITION  ribbon-helix-helix protein, CopG family [Streptomyces lycii].
ACCESSION   WP_235978627
VERSION     WP_235978627.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces lycii
  ORGANISM  Streptomyces lycii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 118)
  AUTHORS   Gomis-Ruth,F.X., Sola,M., Acebo,P., Parraga,A., Guasch,A.,
            Eritja,R., Gonzalez,A., Espinosa,M., del Solar,G. and Coll,M.
  TITLE     The structure of plasmid-encoded transcriptional repressor CopG
            unliganded and bound to its operator
  JOURNAL   EMBO J 17 (24), 7404-7415 (1998)
   PUBMED   9857196
REFERENCE   2  (residues 1 to 118)
  AUTHORS   Acebo,P., Garcia de Lacoba,M., Rivas,G., Andreu,J.M., Espinosa,M.
            and del Solar,G.
  TITLE     Structural features of the plasmid pMV158-encoded transcriptional
            repressor CopG, a protein sharing similarities with both
            helix-turn-helix and beta-sheet DNA binding proteins
  JOURNAL   Proteins 32 (2), 248-261 (1998)
   PUBMED   9714164
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013561.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01402.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Streptomyces lycii"
                     /db_xref="taxon:2654337"
     Protein         1..118
                     /product="ribbon-helix-helix protein, CopG family"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=13111
     Region          2..36
                     /region_name="RHH_CopG_NikR-like"
                     /note="ribbon-helix-helix domains of transcription
                     repressor CopG, nickel responsive transcription factor
                     NikR, and similar proteins; cd21631"
                     /db_xref="CDD:409020"
     Site            order(2..8,12..13,15..16,19,22,27..28,31..32,34..36)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409020"
     Site            order(3,5,7,26..28,32)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:409020"
     Region          <75..111
                     /region_name="PIN_SF"
                     /note="PIN (PilT N terminus) domain: Superfamily; cl28905"
                     /db_xref="CDD:475124"
ORIGIN      
        1 mkrtnvcadp edlailkeaa rrrgiseaei irqgihlaam anrvrdeplf srtfegagrt
       61 pvskrcgmpw ptpyavnval aadydtdavi aldrrdfrae rllgrhkafr vlpddlpl
//
LOCUS       WP_235978674             539 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase family 18 protein [Streptomyces lycii].
ACCESSION   WP_235978674
VERSION     WP_235978674.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces lycii
  ORGANISM  Streptomyces lycii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 539)
  AUTHORS   Perrakis,A., Tews,I., Dauter,Z., Oppenheim,A.B., Chet,I.,
            Wilson,K.S. and Vorgias,C.E.
  TITLE     Crystal structure of a bacterial chitinase at 2.3 A resolution
  JOURNAL   Structure 2 (12), 1169-1180 (1994)
   PUBMED   7704527
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00704.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Streptomyces lycii"
                     /db_xref="taxon:2654337"
     Protein         1..539
                     /product="glycosyl hydrolase family 18 protein"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=56707
     Region          53..142
                     /region_name="CBM_2"
                     /note="Cellulose binding domain; pfam00553"
                     /db_xref="CDD:425748"
     Region          168..538
                     /region_name="ChiA"
                     /note="Chitinase, GH18 family [Carbohydrate transport and
                     metabolism]; COG3325"
                     /db_xref="CDD:442554"
ORIGIN      
        1 mrpdssrrtp ptrhraltal aalllplgvl vglappatga aaaeatatyt ktsdwgsgfe
       61 gkwtvkntgs apltswtvew dfpsgttvgs fwdatvtgsg ghytaknvgw ngtlapgata
      121 sfgfngsgsg eptgctlnga acdgsgtpee peepeepeep dnpdepdapg dhvklgyftn
      181 wgvygrnyhv kdlvtsgtae kithinyafg nvtggkctvg dsyadyekay tadqsvdgqa
      241 dtwdqplrgs fnqllelkek yphikvlwsf ggwtwsggfg eavknpaafa kschdlvedp
      301 rwagvfdgid ldweypnacg ltcdtsgpea fesmmramra efgddlvtaa itadgsaggk
      361 idatdyagas qytdwynvmt ydffgafaaq gptaphsplt sydgipqdgf nsdaavkklr
      421 aqgvpaqkml lgigfygrgw tgvtqsepgg tatgaapgty eagiedykvl kescpvtgtv
      481 agtayahcgn nwwsydtpdt iggkmdyare qglggaffwe lsgdtangel isaidagls
//
LOCUS       WP_235978729              54 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF397 domain-containing protein [Streptomyces lycii].
ACCESSION   WP_235978729
VERSION     WP_235978729.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces lycii
  ORGANISM  Streptomyces lycii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016070.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04149.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..54
                     /organism="Streptomyces lycii"
                     /db_xref="taxon:2654337"
     Protein         1..54
                     /product="DUF397 domain-containing protein"
                     /calculated_mol_wt=5691
ORIGIN      
        1 msqrkwqkss fseggadtca evgdedgisr iresdepgrv sppagrrsap cwpg
//
LOCUS       WP_235978763             754 aa            linear   BCT 02-MAR-2025
DEFINITION  SpoIIE family protein phosphatase [Streptomyces lycii].
ACCESSION   WP_235978763
VERSION     WP_235978763.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces lycii
  ORGANISM  Streptomyces lycii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 754)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Streptomyces lycii"
                     /db_xref="taxon:2654337"
     Protein         1..754
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=79034
     Region          238..>320
                     /region_name="PAS_4"
                     /note="PAS fold; pfam08448"
                     /db_xref="CDD:312075"
     Region          353..752
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
ORIGIN      
        1 mpglrtpavg pdparsrldr llteavhgag ayggavylla pdgrtlwles ftgfplelia
       61 pwtrvsttap lpvtdamrrh elvwvggaga masryprtal ilpyhfclaa hpleetaetg
      121 daadpepght gggdtggaes taggsgnarn plaaagsagp gttwgalmll wpgshpkdms
      181 deerarvvgv arrmtgtlsg aaagnspvlp asaprklaqp rtsvvgpeea qaavlyadrl
      241 pegccaldln ghityisrrg aelvggtvee lvgtrpwrsl pwladpvyed ryraalisrd
      301 ptdftalrpp dhwltfqlyp gptglsvrit pahvrqnapg mpggsshpag ptrlgtiyql
      361 mhlagaltea agtqdvvnla aehllpafga qglvmtvtes grmrivgqhg ypeetithfd
      421 gtpltasspg vraltlgvpg ffpsreeler ayparaalhd gmqawaflpl iasgrpvgtc
      481 vlaydrphaf apderaalas lsgllaqald rarlydtkhr lahglqegll phslphlpgr
      541 levaarylpa tqgmniggdf ydlirldait vgavigdvqg hnvtaaalmg qvrtavhana
      601 tagaspdevl artnrllvdl epglftscly ahidlsrhra llasaghlpp llhtpggpte
      661 vldvppglll gidpdsdypv aevtvppgsv lafytdglve spgtdldesi gelggrlalh
      721 grdgnledva dalvrsagrg vdtddialll lrpc
//
LOCUS       WP_235978739             607 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Streptomyces lycii].
ACCESSION   WP_235978739
VERSION     WP_235978739.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces lycii
  ORGANISM  Streptomyces lycii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 607)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 607)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 607)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 607)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Streptomyces lycii"
                     /db_xref="taxon:2654337"
     Protein         1..607
                     /product="ATP-binding protein"
                     /calculated_mol_wt=62725
     Region          <132..504
                     /region_name="COG3903"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443109"
     Region          376..607
                     /region_name="ComP"
                     /note="Signal transduction histidine kinase ComP [Signal
                     transduction mechanisms]; COG4585"
                     /db_xref="CDD:443642"
ORIGIN      
        1 mktaggtgsg laraavavrg tghpgrrsav wgavalavgl aaagayhrag atgtdllrdl
       61 svgwayaaag lvawwrrpan rtgllllaeg ltwflgnfqg sgvpllfalg awgealnlav
      121 lahlllafpe grlgtrlerr vvacgyglva vggllrtlly dpsagvdasy lacrdcgpna
      181 lllhsdprlf eavdlayrwl galitlvvla alvrrwrvss parrrillpa gvavaiavaf
      241 vgwevlyvla pgslatadal ltlpsdlsqv avpvaflagl lrtrlhraal gnvvvevgpd
      301 paperlqevl srvlgdpalr lglargggrd gyadvhgrpl rlpppgsgla ttpvadgdrr
      361 savlvhdaal gedpqliaav aasvrlclrn stlrsqvtvr aeetraaqar lleaadaerr
      421 rlerdlhdga qtrlvfalms lrrlgrgldd radpalrdtv seadralrla iddlrdlarg
      481 ihpavltreg lgaavtalae eaalpvvvma epgrcpplve stayfvvcea lsnavkhaga
      541 gavsvslrst ggrlavevad dgaggadpgg gtglrgladr vaatggslev vsppgggtri
      601 raelpcg
//
LOCUS       WP_235978804             390 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Streptomyces lycii].
ACCESSION   WP_235978804
VERSION     WP_235978804.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces lycii
  ORGANISM  Streptomyces lycii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Streptomyces lycii"
                     /db_xref="taxon:2654337"
     Protein         1..390
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=41972
     Region          2..355
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 madglarrgh dvhvvaphpg agpervtagg vtvhrlrshr tpfhptfrvc lppqirgsaa
       61 rlldriapda vhvqshfavg rtlvgaarrr gvpvvatnhf mpenligyap lpdrfaaaac
      121 kpawrdlvrv frhaqvvtap tpraarllpe hglgrtplav scgldldrfa qpaaertder
      181 lrvlfvgrld aeknvqdilr alprlpaglp vtaeivgdgs rrgeledlar algvadrvtf
      241 hglvadqevl dayarcdvfc mpgtaelqsl vtmeamaagk pvvaadamal phlvhpgrng
      301 llyppgdipa laaalasvlg dagmrtrmge aargivarhd ightldtfet lyreaaeaar
      361 rlpkprdrre prdrrvrgse speyaahsgr
//
LOCUS       WP_235978211             972 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-N-acetylglucosaminidase domain-containing protein, partial
            [Streptomyces lycii].
ACCESSION   WP_235978211
VERSION     WP_235978211.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces lycii
  ORGANISM  Streptomyces lycii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 972)
  AUTHORS   Sheldon,W.L., Macauley,M.S., Taylor,E.J., Robinson,C.E.,
            Charnock,S.J., Davies,G.J., Vocadlo,D.J. and Black,G.W.
  TITLE     Functional analysis of a group A streptococcal glycoside hydrolase
            Spy1600 from family 84 reveals it is a beta-N-acetylglucosaminidase
            and not a hyaluronidase
  JOURNAL   Biochem J 399 (2), 241-247 (2006)
   PUBMED   16822234
REFERENCE   2  (residues 1 to 972)
  AUTHORS   Heckel,D., Comtesse,N., Brass,N., Blin,N., Zang,K.D. and Meese,E.
  TITLE     Novel immunogenic antigen homologous to hyaluronidase in meningioma
  JOURNAL   Hum Mol Genet 7 (12), 1859-1872 (1998)
   PUBMED   9811929
REFERENCE   3  (residues 1 to 972)
  AUTHORS   Canard,B., Garnier,T., Saint-Joanis,B. and Cole,S.T.
  TITLE     Molecular genetic analysis of the nagH gene encoding a
            hyaluronidase of Clostridium perfringens
  JOURNAL   Mol Gen Genet 243 (2), 215-224 (1994)
   PUBMED   8177218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019193.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07555.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..972
                     /organism="Streptomyces lycii"
                     /db_xref="taxon:2654337"
     Protein         1..>972
                     /product="beta-N-acetylglucosaminidase domain-containing
                     protein"
     Region          2..130
                     /region_name="Glyco_hydro_20b"
                     /note="Glycosyl hydrolase family 20, domain 2; cl03741"
                     /db_xref="CDD:446174"
     Region          186..484
                     /region_name="NAGidase"
                     /note="beta-N-acetylglucosaminidase; pfam07555"
                     /db_xref="CDD:429533"
     Region          741..>821
                     /region_name="MJ0795"
                     /note="S-layer protein MJ0795, predicted component of type
                     IV pili-like system [General function prediction only];
                     COG1361"
                     /db_xref="CDD:440972"
     Region          847..960
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
ORIGIN      
        1 mpavwprpqd lraqggpvpv geravvvadg dtdpyaldal revlrnagad tvldvspgaa
       61 lppdalvvra dargaeqalr alrasergdl psggyrlavg rtggrdtval agegpdglfh
      121 avqtlrqlvt gedsgggsga srgpgnradp agpperpgdg rddrtrpggr alagvvvrdw
      181 paapvrgtte gfygtpwshg erlaqlgflg rtkqnhylya pgddpyrqar wrdpypagqr
      241 aefraladra rrnhvtlgwa vapgqalcfs sdedlralnr kidamwalgv rsfqlqfqdv
      301 sysewhcead retygsgpga aaraqarvan aaarhlagrh pgaepltlmp tefyqdgstd
      361 yrdalagalh sgvhvawtgv gvvpgtitgg elaearsafg hplvtmdnyp vndyakdrlf
      421 lgpytgrepa vatgssallt namqqpaasr iplftaadya wnprgyrpae swraavddla
      481 gedagsraal ralaandass vlggeesayl rpliealwea yggtdreale raaqrlddaf
      541 avmrkaperl sgpdaaalre etgpwldqla rygragrrav amllaqdagd gaaawraqld
      601 vrklreeirs gsatvgkgvl apfldraldr adawtgadra gpatsvtqgp seltvdlgrp
      661 rplaavtvlt apgkgspadv eahvpgegwr plgalsedgw tqlradgvra dtlrltwped
      721 grapevhrvv pwfgdtpgar lelereetda viggrartvp velvperpgd irgrlvarap
      781 egvevevpdg vtvrrgatte vpvrvtvped tpagsyevpf dfageertlt vraypetggp
      841 dlargakass sgdetagfpa aaavdgdpat rwsspaedda wfqvelaepa rvgrvvlhwq
      901 eayadryriq vsadgrdwrt aatvrdgrgg resvrmdaad trfvrvrgdr rateygcslw
      961 svevfavagg gd
//
LOCUS       WP_235978814            1125 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Streptomyces lycii].
ACCESSION   WP_235978814
VERSION     WP_235978814.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces lycii
  ORGANISM  Streptomyces lycii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 1125)
  AUTHORS   Gao,G., Nara,T., Nakajima-Shimada,J. and Aoki,T.
  TITLE     Novel organization and sequences of five genes encoding all six
            enzymes for de novo pyrimidine biosynthesis in Trypanosoma cruzi
  JOURNAL   J Mol Biol 285 (1), 149-161 (1999)
   PUBMED   9878395
REFERENCE   2  (residues 1 to 1125)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
REFERENCE   3  (residues 1 to 1125)
  AUTHORS   Nygaard,P., Duckert,P. and Saxild,H.H.
  TITLE     Role of adenine deaminase in purine salvage and nitrogen metabolism
            and characterization of the ade gene in Bacillus subtilis
  JOURNAL   J Bacteriol 178 (3), 846-853 (1996)
   PUBMED   8550522
REFERENCE   4  (residues 1 to 1125)
  AUTHORS   Lollier,M., Jaquet,L., Nedeva,T., Lacroute,F., Potier,S. and
            Souciet,J.L.
  TITLE     As in Saccharomyces cerevisiae, aspartate transcarbamoylase is
            assembled on a multifunctional protein including a
            dihydroorotase-like cryptic domain in Schizosaccharomyces pombe
  JOURNAL   Curr Genet 28 (2), 138-149 (1995)
   PUBMED   8590465
REFERENCE   5  (residues 1 to 1125)
  AUTHORS   Jabri,E., Carr,M.B., Hausinger,R.P. and Karplus,P.A.
  TITLE     The crystal structure of urease from Klebsiella aerogenes
  JOURNAL   Science 268 (5213), 998-1004 (1995)
   PUBMED   7754395
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01979.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1125
                     /organism="Streptomyces lycii"
                     /db_xref="taxon:2654337"
     Protein         1..1125
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=118581
     Region          92..>547
                     /region_name="COG4946"
                     /note="Uncharacterized N-terminal domain of tricorn
                     protease, contains WD40 repeats [Function unknown]"
                     /db_xref="CDD:443973"
     Region          478..680
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
     Region          689..1084
                     /region_name="HutI"
                     /note="Imidazolonepropionase or related amidohydrolase
                     [Secondary metabolites biosynthesis, transport and
                     catabolism]; COG1228"
                     /db_xref="CDD:440841"
ORIGIN      
        1 mdtvgtphpp aapdggtgaa papvsrrrfl rtaagtaaag taasgllpll pgapaaaapa
       61 rrvplsltaa tngsatlspa gdrlvaevqn tlwslpsggg taepltppdl eptrpvfspd
      121 gellalcayr gggfhlwvmr pdgsglrqlt dgpwddraps wspdgrrlaf aserggdpvg
      181 gspyrvwtvd vasgdvtrvt gregqdgpgq egawedfdpv wspdgrriwf vraplaegal
      241 dartvasvpa dgsgpvateh tgtaqlmtpa vspsgrlayl rttaapnasc tlvvdgepvp
      301 ldgdvapvpp rwtvgagadg aeelllnvgg rfrlvrpgap gagreipfaa tlpvdrpryr
      361 vkeydfdgrr vrpvrgiqlp alspdgeqva faalnalwvc gtsgggpprk lvqagptrfl
      421 lgpswapdga sllyaddreg lyavrrhvlr tgeesvlarg grvhpalspd gerlacldma
      481 gnlvvrelas gaertlaapl gggglpgrps wspdgrflaf cdrnrlnrrf regynlvrvv
      541 dtragkaggs gatgetsgts rtsgtaeage tanagetget gasrpdrpad rlyavaphvs
      601 vsdrydsgpv wspdgrsmav ivesalwllp vaadgspdge prrltdepad hptwsgdarh
      661 llylsggrlr lldvrggapr tvrvpleyrr pspedtvvha grlwdgtgdt vredadlvvr
      721 rgriaaveph rpgrrarrav dasertvlpg lwdahthpwq styggrqtvt qlaygittav
      781 sfggfayeqa hlreavaagr lagprllttg elldgarvay smgrghrtrd glrrslerge
      841 algwdfvkty vrapgwvmae aarfaherlg vrsgshlctp gvqlgqdltt hlqatqrley
      901 gratsaagya ygdveeiyta agfhliatpf naaylvgaep slaadprvta lmppwdtaav
      961 eelaarppse aqlttmdres avyrrvlegg glvalgtdsp llpvgihlhm glralrragl
     1021 savqalrtat vlparvfgae rdlgtleagk ladvtvvdgd pftdfgtlvr tvsvlrggvp
     1081 yeqeeligef paaparadgg rsrsgwravg eqlrrdgcce paphl
//
LOCUS       WP_235978857             277 aa            linear   BCT 02-MAR-2025
DEFINITION  PAAR domain-containing protein [Zestomonas carbonaria].
ACCESSION   WP_235978857
VERSION     WP_235978857.1
KEYWORDS    RefSeq.
SOURCE      Zestomonas carbonaria
  ORGANISM  Zestomonas carbonaria
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Zestomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017315.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05488.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Zestomonas carbonaria"
                     /db_xref="taxon:2762745"
     Protein         1..277
                     /product="PAAR domain-containing protein"
                     /calculated_mol_wt=28639
     Region          <5..55
                     /region_name="PAAR_CT_2"
                     /note="proline-alanine-alanine-arginine (PAAR) domain with
                     uncharacterized C-terminal extension; cd14744"
                     /db_xref="CDD:269829"
     Region          214..>258
                     /region_name="Pyocin_S"
                     /note="S-type Pyocin; cl24020"
                     /db_xref="CDD:420156"
ORIGIN      
        1 mvnhrpaarm tdpvwcpack cmgfiaegap nyihlglpva leghtvqcgc pagsnrliat
       61 dsffdveegg vgrispdlaa saqaathkwa kalrggvfsn aytggiprhe vrglapnhcv
      121 faksctvphg steagtttes vgnfgrvsvl gtverkdsag qgaavgtmal grvagqtale
      181 glgswslrga gaaastllla lwpsdtgdsa lysedelrhl saaatrvrfq frrgadavvr
      241 vyglhsgngs vpvveanwid gkramearlg gvtisrc
//
LOCUS       WP_235978925             308 aa            linear   BCT 02-MAR-2025
DEFINITION  c-type cytochrome domain-containing protein [Zestomonas
            carbonaria].
ACCESSION   WP_235978925
VERSION     WP_235978925.1
KEYWORDS    RefSeq.
SOURCE      Zestomonas carbonaria
  ORGANISM  Zestomonas carbonaria
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Zestomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019262.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07635.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Zestomonas carbonaria"
                     /db_xref="taxon:2762745"
     Protein         1..308
                     /product="c-type cytochrome domain-containing protein"
                     /calculated_mol_wt=32864
     Region          42..96
                     /region_name="PSCyt1"
                     /note="Planctomycete cytochrome C; pfam07635"
                     /db_xref="CDD:429568"
     Region          <108..238
                     /region_name="COG3748"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:442962"
     Region          260..300
                     /region_name="DUF5666"
                     /note="Domain of unknown function (DUF5666); pfam18914"
                     /db_xref="CDD:465907"
ORIGIN      
        1 mpirparhpl lalalmllap atlpaaepty rddiapiles rcllchsgeq aplglrldsl
       61 ehllagsqrg pvvqsgnpad selikrlkgt sqprmpltgp pflddreial fetwiaggla
      121 pgapgkaeta vaatpstpkp geavnyshie ailgrrcakc hspsglmgpp pegylltsya
      181 ealafgerar ivpgsaease vvrrirgqal prmpldgppf ldeeeialiv awidqgarda
      241 qgqpaivpvg arvrlhgrld grwqldglpl rvnaatrldk spqvgdyvqv rgrlsgdgmi
      301 nverlrpr
//
LOCUS       WP_235978965             172 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein, partial
            [Zestomonas carbonaria].
ACCESSION   WP_235978965
VERSION     WP_235978965.1
KEYWORDS    RefSeq.
SOURCE      Zestomonas carbonaria
  ORGANISM  Zestomonas carbonaria
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Zestomonas.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Zestomonas carbonaria"
                     /db_xref="taxon:2762745"
     Protein         1..>172
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
     Region          9..>171
                     /region_name="WzzB"
                     /note="LPS O-antigen chain length determinant protein,
                     WzzB/FepE family [Cell wall/membrane/envelope biogenesis];
                     COG3765"
                     /db_xref="CDD:442979"
ORIGIN      
        1 mdgqvqllrq pvndeidlve lartlwqqkl lilfcavavs aiaalyafta tpyyrvqsil
       61 rptpikelda lnqsgvykln pdaalqrmgi alesyanrle ffrthpdlfv elqqpnltle
      121 qsferfnrda ftvlkpdakk dtsmgryvgi amsypagvqg pealnglvdy vi
//
LOCUS       WP_235978999             716 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome c biogenesis protein CcsA [Zestomonas carbonaria].
ACCESSION   WP_235978999
VERSION     WP_235978999.1
KEYWORDS    RefSeq.
SOURCE      Zestomonas carbonaria
  ORGANISM  Zestomonas carbonaria
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Zestomonas.
REFERENCE   1  (residues 1 to 716)
  AUTHORS   Sawyer,E.B. and Barker,P.D.
  TITLE     Continued surprises in the cytochrome c biogenesis story
  JOURNAL   Protein Cell 3 (6), 405-409 (2012)
   PUBMED   22723177
REFERENCE   2  (residues 1 to 716)
  AUTHORS   Stevens,J.M., Mavridou,D.A., Hamer,R., Kritsiligkou,P.,
            Goddard,A.D. and Ferguson,S.J.
  TITLE     Cytochrome c biogenesis System I
  JOURNAL   FEBS J 278 (22), 4170-4178 (2011)
   PUBMED   21958041
REFERENCE   3  (residues 1 to 716)
  AUTHORS   Sanders,C., Turkarslan,S., Lee,D.W. and Daldal,F.
  TITLE     Cytochrome c biogenesis: the Ccm system
  JOURNAL   Trends Microbiol 18 (6), 266-274 (2010)
   PUBMED   20382024
REFERENCE   4  (residues 1 to 716)
  AUTHORS   Page,M.D., Pearce,D.A., Norris,H.A.C. and Ferguson,S.J.
  TITLE     The Paracoccus denitrificans ccmA, B and C genes: cloning and
            sequencing, and analysis of the potential of their products to form
            a haem or apo- c-type cytochrome transporter
  JOURNAL   Microbiology (Reading) 143 (Pt 2), 563-576 (1997)
   PUBMED   9043133
REFERENCE   5  (residues 1 to 716)
  AUTHORS   Delgado,M.J., Yeoman,K.H., Wu,G., Vargas,C., Davies,A.E.,
            Poole,R.K., Johnston,A.W. and Downie,J.A.
  TITLE     Characterization of the cycHJKL genes involved in cytochrome c
            biogenesis and symbiotic nitrogen fixation in Rhizobium
            leguminosarum
  JOURNAL   J Bacteriol 177 (17), 4927-4934 (1995)
   PUBMED   7665469
REFERENCE   6  (residues 1 to 716)
  AUTHORS   Thony-Meyer,L., Fischer,F., Kunzler,P., Ritz,D. and Hennecke,H.
  TITLE     Escherichia coli genes required for cytochrome c maturation
  JOURNAL   J Bacteriol 177 (15), 4321-4326 (1995)
   PUBMED   7635817
REFERENCE   7  (residues 1 to 716)
  AUTHORS   Bonnard,G. and Grienenberger,J.M.
  TITLE     A gene proposed to encode a transmembrane domain of an ABC
            transporter is expressed in wheat mitochondria
  JOURNAL   Mol Gen Genet 246 (1), 91-99 (1995)
   PUBMED   7529870
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013725.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01578.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Zestomonas carbonaria"
                     /db_xref="taxon:2762745"
     gene            1..716
                     /gene="ccsA"
     Protein         1..716
                     /product="cytochrome c biogenesis protein CcsA"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /GO_process="GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /calculated_mol_wt=77045
     Region          30..>268
                     /region_name="CcmF"
                     /note="Cytochrome c biogenesis protein CcmF [Energy
                     production and conversion, Posttranslational modification,
                     protein turnover, chaperones]; COG1138"
                     /db_xref="CDD:440753"
ORIGIN      
        1 mirtwlfdge strgqaiagl vlscgllwfl pqagnallwl fcvlillgal rpaarlslwr
       61 lalgglygac lalvlhlvad hfqlryvwly sssalplylk vsnlwggdeg tvlllatfcl
      121 atamggaslp gwagrggalv aawyvataaw lgpfaatpad wlqaqdsqgm nahlqtfwma
      181 lhaplilaay awtlapagaa igalgkaspn ygaialvqsr rswlvltagi gagmawaled
      241 ftfgqlwhwd pvqtsafavw allgavlhga rrwregqrll palslmaaal vcvamsvtrs
      301 evlasshryi gttswmshla laavllglgl wqagkalgrr tgnilrggte rtldlavylf
      361 agaallamga llrahlhewl nvektpelkp ffelamawsg pgelgglyea faqwdvdgyv
      421 lgkwllpila afglvggytf lrrllrqrvv vavtlavsil aglvawrggw ltrqysgdgv
      481 lsqnivavlp wldaallgaa fllvaclawg avsvwrtrrl gtlrhtgsla lihggavval
      541 vgglaataln aylpitlpps tddeawhsvs eqlqlrirpl dseadfsgyr aiaqvelrvd
      601 gellagqalf qddrrlppay qgpmrqlcei ldyryarhvg dpgymlhpfi vrgwsqdlqv
      661 wvpasprlmv aaeeggeaag deqslvvirr ypfvsllwig llamlagsla lpgrgr
//
LOCUS       WP_235979016              85 aa            linear   BCT 02-MAR-2025
DEFINITION  phospholipase D-like domain-containing protein, partial [Zestomonas
            carbonaria].
ACCESSION   WP_235979016
VERSION     WP_235979016.1
KEYWORDS    RefSeq.
SOURCE      Zestomonas carbonaria
  ORGANISM  Zestomonas carbonaria
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Zestomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13091.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Zestomonas carbonaria"
                     /db_xref="taxon:2762745"
     Protein         <1..>85
                     /product="phospholipase D-like domain-containing protein"
     Region          <6..76
                     /region_name="PLDc_SF"
                     /note="Catalytic domain of phospholipase D superfamily
                     proteins; cl15239"
                     /db_xref="CDD:472788"
     Site            order(44,46,59,61,72)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197200"
     Site            44
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197200"
ORIGIN      
        1 rkpdpdaelr kddleglnih vatlkswgtp hgqseidykd iyvhsklfla ddvfftlgsa
       61 ninvrsmetd selniacpsp sltrq
//
LOCUS       WP_235979025             245 aa            linear   BCT 02-MAR-2025
DEFINITION  L,D-transpeptidase family protein [Croceibacterium atlanticum].
ACCESSION   WP_235979025
VERSION     WP_235979025.1
KEYWORDS    RefSeq.
SOURCE      Croceibacterium atlanticum
  ORGANISM  Croceibacterium atlanticum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Croceibacterium.
REFERENCE   1  (residues 1 to 245)
  AUTHORS   Biarrotte-Sorin,S., Hugonnet,J.E., Delfosse,V., Mainardi,J.L.,
            Gutmann,L., Arthur,M. and Mayer,C.
  TITLE     Crystal structure of a novel beta-lactam-insensitive peptidoglycan
            transpeptidase
  JOURNAL   J Mol Biol 359 (3), 533-538 (2006)
   PUBMED   16647082
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015679.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03734.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Croceibacterium atlanticum"
                     /db_xref="taxon:1267766"
     Protein         1..245
                     /product="L,D-transpeptidase family protein"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=25796
     Region          104..>234
                     /region_name="PRK06132"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:235709"
ORIGIN      
        1 meffniaphm ppmtkagsif garamlalaa aallaacsse aeeapsaadp nawfageeal
       61 adnrdivdaq pnaetapapa deqqaqpkad spfiikrilp iegpikygew hwddegvpeg
      121 plvmtvdlea rvlsvfrdgy eigaaavllg tpehptptgt fpilskerhn vsekygnapm
      181 pwtlrltwdg vaihggseve ngyashgcig apddfvsrly aiaskgdrvi itrgvaagig
      241 tplss
//
LOCUS       WP_235979322             585 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase family 95 catalytic domain-containing protein
            [Croceibacterium atlanticum].
ACCESSION   WP_235979322
VERSION     WP_235979322.1
KEYWORDS    RefSeq.
SOURCE      Croceibacterium atlanticum
  ORGANISM  Croceibacterium atlanticum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Croceibacterium.
REFERENCE   1  (residues 1 to 585)
  AUTHORS   Anso,I., Naegeli,A., Cifuente,J.O., Orrantia,A., Andersson,E.,
            Zenarruzabeitia,O., Moraleda-Montoya,A., Garcia-Alija,M.,
            Corzana,F., Del Orbe,R.A., Borrego,F., Trastoy,B., Sjogren,J. and
            Guerin,M.E.
  TITLE     Turning universal O into rare Bombay type blood
  JOURNAL   Nat Commun 14 (1), 1765 (2023)
   PUBMED   36997505
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 585)
  AUTHORS   Nakamura,S., Nihira,T., Kurata,R., Nakai,H., Funane,K., Park,E.Y.
            and Miyazaki,T.
  TITLE     Structure of a bacterial alpha-1,2-glucosidase defines mechanisms
            of hydrolysis and substrate specificity in GH65 family hydrolases
  JOURNAL   J Biol Chem 297 (6), 101366 (2021)
   PUBMED   34728215
REFERENCE   3  (residues 1 to 585)
  AUTHORS   Rogowski,A., Briggs,J.A., Mortimer,J.C., Tryfona,T., Terrapon,N.,
            Lowe,E.C., Basle,A., Morland,C., Day,A.M., Zheng,H., Rogers,T.E.,
            Thompson,P., Hawkins,A.R., Yadav,M.P., Henrissat,B., Martens,E.C.,
            Dupree,P., Gilbert,H.J. and Bolam,D.N.
  TITLE     Glycan complexity dictates microbial resource allocation in the
            large intestine
  JOURNAL   Nat Commun 6, 7481 (2015)
   PUBMED   26112186
  REMARK    Erratum:[Nat Commun. 2016 Feb 05;7:10705. doi:
            10.1038/ncomms10705.. PMID: 26848059]
            Publication Status: Online-Only
REFERENCE   4  (residues 1 to 585)
  AUTHORS   Okada,S., Yamamoto,T., Watanabe,H., Nishimoto,T., Chaen,H.,
            Fukuda,S., Wakagi,T. and Fushinobu,S.
  TITLE     Structural and mutational analysis of substrate recognition in
            kojibiose phosphorylase
  JOURNAL   FEBS J 281 (3), 778-786 (2014)
   PUBMED   24255995
REFERENCE   5  (residues 1 to 585)
  AUTHORS   Nagae,M., Tsuchiya,A., Katayama,T., Yamamoto,K., Wakatsuki,S. and
            Kato,R.
  TITLE     Structural basis of the catalytic reaction mechanism of novel
            1,2-alpha-L-fucosidase from Bifidobacterium bifidum
  JOURNAL   J Biol Chem 282 (25), 18497-18509 (2007)
   PUBMED   17459873
REFERENCE   6  (residues 1 to 585)
  AUTHORS   Egloff,M.P., Uppenberg,J., Haalck,L. and van Tilbeurgh,H.
  TITLE     Crystal structure of maltose phosphorylase from Lactobacillus
            brevis: unexpected evolutionary relationship with glucoamylases
  JOURNAL   Structure 9 (8), 689-697 (2001)
   PUBMED   11587643
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046196.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22124.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Croceibacterium atlanticum"
                     /db_xref="taxon:1267766"
     Protein         1..585
                     /product="glycosyl hydrolase family 95 catalytic
                     domain-containing protein"
                     /calculated_mol_wt=64365
     Region          <1..78
                     /region_name="Glyco_hyd_65N_2"
                     /note="Glycosyl hydrolase family 65, N-terminal domain;
                     pfam14498"
                     /db_xref="CDD:405224"
ORIGIN      
        1 mdvelasqqa eahvtadgpf lnltgrntar agiegalrla grvlvesdga vapagtrlrv
       61 adarnitill amatsyrgfg ntdgdpvala eaavrraark gydklredai aahrelfrrv
      121 sldlgqtpaa glptderiaa ddlradpala klyfdygryl litssrpgsq panlqgiwna
      181 eneppwqsky tvnintqmny wpaettalpe cteplirmvr elaitgesta rsmygargwv
      241 chhntdlwra tapidgaqwg mwptggawlc thlwdhydys rdrdylagiy svmrgaalff
      301 idtlqtdpet gylvtnpsis penrhpegaa icagpsmdqq ilrdlleqta kaaeilqida
      361 gfaaelrdvr srlapdrigs qgqlqewrqd wdgnalepdh rhvshlyglf pssqinpdtt
      421 palamaarrs lelrgdestg watawrinlr arlregdrah dvlgfllgpg rtypnmfdah
      481 ppfqidgnfg gtraiaemlm qsredqilfl palpsswrng svtglrargg crvdlhwrdg
      541 liaqavlnad aegrwqvgrp arllevslak gqsfrfsead lpaar
//
LOCUS       WP_235979716             305 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Rhabdothermincola
            sediminis].
ACCESSION   WP_235979716
VERSION     WP_235979716.1
KEYWORDS    RefSeq.
SOURCE      Rhabdothermincola sediminis
  ORGANISM  Rhabdothermincola sediminis
            Bacteria; Bacillati; Actinomycetota; Acidimicrobiia;
            Acidimicrobiales; Iamiaceae; Rhabdothermincola.
REFERENCE   1  (residues 1 to 305)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 305)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Rhabdothermincola sediminis"
                     /db_xref="taxon:2751370"
     Protein         1..305
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=31985
     Region          6..246
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(15,17..18,20,39..41,101..103,151..153,166,170,
                     196..199)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(125,153,166,170)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 madigydgkv aivtgagggl grehalelar rgarvvvndl ggsvsgeggd aspaekvaae
       61 indlggeava nhdsvgtpeg gkaivqaald afgtvdivin nagilrdktf hnmtpdllep
      121 viqvhllgaf yvtqpawvvm rekgygrvvn tssnsgllgn fgqsnygaak mglvgftrvl
      181 anegrkynik anaiapvakt rmteellgpv gdmldpatvt pvvcwlasea cdvsgevysv
      241 agglvarffi gltpgyfkkd ltvedvrdhw deirdtegyi ipegpndelk kiftiltegk
      301 egkvs
//
LOCUS       WP_235980037             350 aa            linear   BCT 02-MAR-2025
DEFINITION  alanine racemase [Rhabdothermincola sediminis].
ACCESSION   WP_235980037
VERSION     WP_235980037.1
KEYWORDS    RefSeq.
SOURCE      Rhabdothermincola sediminis
  ORGANISM  Rhabdothermincola sediminis
            Bacteria; Bacillati; Actinomycetota; Acidimicrobiia;
            Acidimicrobiales; Iamiaceae; Rhabdothermincola.
REFERENCE   1  (residues 1 to 350)
  AUTHORS   Shaw,J.P., Petsko,G.A. and Ringe,D.
  TITLE     Determination of the structure of alanine racemase from Bacillus
            stearothermophilus at 1.9-A resolution
  JOURNAL   Biochemistry 36 (6), 1329-1342 (1997)
   PUBMED   9063881
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013345.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01168.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Rhabdothermincola sediminis"
                     /db_xref="taxon:2751370"
     Protein         1..350
                     /product="alanine racemase"
                     /EC_number="5.1.1.1"
                     /calculated_mol_wt=36510
     Region          27..349
                     /region_name="PLPDE_III"
                     /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
                     Enzymes; cl00261"
                     /db_xref="CDD:469695"
     Site            order(51,53,95,139,172,174,228..231)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate (PLP) binding site [chemical
                     binding]"
                     /db_xref="CDD:143484"
     Site            53
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:143484"
ORIGIN      
        1 matddpmdae taelaalppl ptpaplvrle alehnlamma aawpgnalrp hvkafkstal
       61 arlladrghp gfccatirem eglaaaglgq dlllanevld atrlgalves gsarvtvavd
      121 saetigaava ggvpevlidv nvglprcgcp pesagllagq araaglvvrg vmgyeghvvg
      181 vadraareag vaesmtllae ahravggevv sgggtgtwdl nrwvtelqag sfllmdtaya
      241 alglpfrmal svlgtvisvn raqdyavadv glkalgmdhg npriegfrvw fcsdehvtfa
      301 pregvalprv gdrvrvlpah vdptvayher ffvvrggevv dewpidlrgw
//
LOCUS       WP_235980106             585 aa            linear   BCT 02-MAR-2025
DEFINITION  C69 family dipeptidase [Streptomyces albidus (ex Kaewkla and Franco
            2022)].
ACCESSION   WP_235980106
VERSION     WP_235980106.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces albidus (ex Kaewkla and Franco 2022)
  ORGANISM  Streptomyces albidus (ex Kaewkla and Franco 2022)
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 585)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     Peptidase family U34 belongs to the superfamily of N-terminal
            nucleophile hydrolases
  JOURNAL   Protein Sci 12 (5), 1131-1135 (2003)
   PUBMED   12717035
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015536.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03577.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Streptomyces albidus (ex Kaewkla and Franco
                     2022)"
                     /db_xref="taxon:722709"
     Protein         1..585
                     /product="C69 family dipeptidase"
                     /EC_number="3.4.13.-"
                     /GO_function="GO:0016805 - dipeptidase activity [Evidence
                     IEA]"
                     /GO_function="GO:0070004 - cysteine-type exopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=63972
     Region          16..470
                     /region_name="PepD"
                     /note="Dipeptidase [Amino acid transport and metabolism];
                     cl41909"
                     /db_xref="CDD:477862"
ORIGIN      
        1 mgqkavrqpd ksfatyigkn rsstghtmlg gfghepsshw melvpaqhhp egseitvgat
       61 deadmpgkpt kipqarhtyr yltsnyseft gmpapltngg lnekgvaard vwsnsrkell
      121 dmtpkdqtgp qysdlsriam eragsareav eilgelidth gyttyggnsh lfadgdegwv
      181 lveyaggkgl waaerlgpdd irvsypgyik efptdavdgk npdfkasknl vsfaekkgwy
      241 dpskdkvfdl qkvyqepfpt ksfpvgknad pkdpapyrnp vslekefagl gkvrledmmr
      301 ivrdprwsdd rsgyghvael dpdlpdprla tlwmaptaav tapyipvaig trklpveytq
      361 hrymtagass eyldpeyaeq eatesatqtf krlmyatcar prlylgrvtg afegfeaqqi
      421 kawkkvqqka eadadrsadi ltsytnrqal dglklgnhll ddiltksrah gglhepstgd
      481 tsendgstas arsrpmglrg pesardrmnc dtgggwtdgs svdraghygd pakvpdysaa
      541 rvsgrtaast eqshdsawqt wapwsiagvs llvaagavwr srrsa
//
LOCUS       WP_235980187             515 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Croceibacterium atlanticum].
ACCESSION   WP_235980187
VERSION     WP_235980187.1
KEYWORDS    RefSeq.
SOURCE      Croceibacterium atlanticum
  ORGANISM  Croceibacterium atlanticum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Croceibacterium.
REFERENCE   1  (residues 1 to 515)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Croceibacterium atlanticum"
                     /db_xref="taxon:1267766"
     Protein         1..515
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=56411
     Region          <174..240
                     /region_name="PA"
                     /note="Protease-associated (PA) domain. The PA domain is
                     an insert domain in a diverse fraction of proteases. The
                     significance of the PA domain to many of the proteins in
                     which it is inserted is undetermined. It may be a
                     protein-protein interaction domain. At...; cl28883"
                     /db_xref="CDD:333703"
     Site            208..210
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:240123"
     Region          263..498
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 maaepddiar iideglnhsq vqttaaelld gigarltnsp nmrkaeewai qefrdlglsn
       61 irregfefgr gwestysyan lvaprplqlt vapiawmpgt ngqpieaevf vapmskkehf
      121 dayrgklsgk ivlvstpgtg deptrpaftr ldsadiakrd eialpiydpe aadrrsdrve
      181 faleqaaflk segalamvkm syrdgkllhg sgytfqdgks peipgfemaa edyrrlarla
      241 ktgpapvisl asdarfvdgd tkayniiaei pgtdpkagyv magahfdswa lgdgavdnga
      301 gslavmeaar ilktigakpk rtirfvlwaa eeqgllgsla yirqhmverq gddgstsmen
      361 yykwadlwpi epkpgyydlk ayfnmdngsg klrgihaegn vgaekllrkw lspfaglgag
      421 svvsgntggt dhvfmqqvgl pgfqfiqdpl dysarlhhtn idtmdhvrfd dmrqasvvma
      481 gmllqsands etlpreplpk qpsvtepfky eyped
//
LOCUS       WP_235980467             332 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Streptomyces
            albidus (ex Kaewkla and Franco 2022)].
ACCESSION   WP_235980467
VERSION     WP_235980467.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces albidus (ex Kaewkla and Franco 2022)
  ORGANISM  Streptomyces albidus (ex Kaewkla and Franco 2022)
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 332)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 332)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 332)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 332)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Streptomyces albidus (ex Kaewkla and Franco
                     2022)"
                     /db_xref="taxon:722709"
     Protein         1..332
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=35282
     Region          23..315
                     /region_name="drrA"
                     /note="daunorubicin resistance ABC transporter ATP-binding
                     subunit; TIGR01188"
                     /db_xref="CDD:130256"
ORIGIN      
        1 mptsrlgdgh pspaavstvg lrksygdktv ldgidlcipa gsvfallgpn gagkttavni
       61 lstlisadag dirvgghdla tdpqavraai gvtgqfsavd glitgeenml lmadlhhlsk
      121 regrraaael lerfdlveaa kkpaqtysgg mkrrldiamt lvgnpriifl depttgldpr
      181 srhnmwgiir elvsdgvtvf lttqyldead eladriavln ggkivaegta eelkrmipgg
      241 hvrlrfsdpa ayqnaafalr evtrddeala lqipsdgsqr elrsildwld sagieadelt
      301 vhtpdlddvf faltgaddsa gtppnqpkea vr
//
LOCUS       WP_235980490             251 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Staphylococcus durrellii].
ACCESSION   WP_235980490
VERSION     WP_235980490.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus durrellii
  ORGANISM  Staphylococcus durrellii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 251)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 251)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Staphylococcus durrellii"
                     /db_xref="taxon:2781773"
     Protein         1..251
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=28709
     Region          4..100
                     /region_name="DUF5613"
                     /note="Domain of unknown function (DUF5613); pfam18467"
                     /db_xref="CDD:436523"
     Region          126..240
                     /region_name="yhbS"
                     /note="Predicted N-acetyltransferase YhbS [General
                     function prediction only]; COG3153"
                     /db_xref="CDD:442387"
ORIGIN      
        1 mssiamsdiy ktghldfedn kkliyltpse pivyssnnwi ykampsleqw ladietqstm
       61 hraqgsnhls ftfpedetpn eqlrkeiknk sfelsylely aispaelmsa etinidvqfv
      121 trdsiedyld vhqvfaesfg ndyvqqstel irhrfadevi qrviaykdki pvgilnlila
      181 edtieidgfg vlpkyqrmgi gkamqnfvae vandrtiilv adgedtakdm yikqgyvyis
      241 ysynvlkeqi n
//
LOCUS       WP_235980533              92 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4142 domain-containing protein [Streptomyces albidus (ex Kaewkla
            and Franco 2022)].
ACCESSION   WP_235980533
VERSION     WP_235980533.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces albidus (ex Kaewkla and Franco 2022)
  ORGANISM  Streptomyces albidus (ex Kaewkla and Franco 2022)
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025013.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13628.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Streptomyces albidus (ex Kaewkla and Franco
                     2022)"
                     /db_xref="taxon:722709"
     Protein         1..92
                     /product="DUF4142 domain-containing protein"
                     /calculated_mol_wt=10108
     Region          <1..80
                     /region_name="COG3652"
                     /note="Predicted outer membrane protein, contains DUF4142
                     domain [Function unknown]"
                     /db_xref="CDD:442869"
ORIGIN      
        1 mgvtlpaqtt gsqqeylsdm ekaqgkefdq vlvnhlrrqh gvvfgliglv rdqtrnaivr
       61 slatranavv ldhitvledt glvkfeelnd vh
//
LOCUS       WP_235980657             320 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Streptomyces albidus (ex
            Kaewkla and Franco 2022)].
ACCESSION   WP_235980657
VERSION     WP_235980657.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces albidus (ex Kaewkla and Franco 2022)
  ORGANISM  Streptomyces albidus (ex Kaewkla and Franco 2022)
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 320)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 320)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 320)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Streptomyces albidus (ex Kaewkla and Franco
                     2022)"
                     /db_xref="taxon:722709"
     Protein         1..320
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=35256
     Region          29..312
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(126..127,130,167)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238347"
ORIGIN      
        1 mtalllpall tgcgaqvedg ggqskkarvn rcgeqvayev prravayegg sadklfslgl
       61 tehvhgyvmp panppvsesp waseyakvkk lsddllnkev vveaesdfvv agwesgfseq
      121 rgitpeildk lgvqsfmhae scynyprype kvtpfqglwt dlerlgrifr vekrahevva
      181 glkkrvnave skapdgdrvp vflydsgkeq pataggrvpp ddiirtaggr nifggldqrw
      241 tqaswesvak aepqvviild ygdqpaekki eflkksphtr dlpaveknnf fvldynegis
      301 gprnidglek fakylrsldh
//
LOCUS       WP_235980734             208 aa            linear   BCT 02-MAR-2025
DEFINITION  TadE/TadG family type IV pilus assembly protein, partial
            [Streptomyces albidus (ex Kaewkla and Franco 2022)].
ACCESSION   WP_235980734
VERSION     WP_235980734.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces albidus (ex Kaewkla and Franco 2022)
  ORGANISM  Streptomyces albidus (ex Kaewkla and Franco 2022)
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 208)
  AUTHORS   Kachlany,S.C., Planet,P.J., DeSalle,R., Fine,D.H. and Figurski,D.H.
  TITLE     Genes for tight adherence of Actinobacillus actinomycetemcomitans:
            from plaque to plague to pond scum
  JOURNAL   Trends Microbiol 9 (9), 429-437 (2001)
   PUBMED   11553455
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019428.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07811.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Streptomyces albidus (ex Kaewkla and Franco
                     2022)"
                     /db_xref="taxon:722709"
     Protein         <1..208
                     /product="TadE/TadG family type IV pilus assembly protein"
ORIGIN      
        1 lgtspietls rrrfdaepsg atddalplrs rtqraapgag qgggpgegrg aapassgfrp
       61 qpgtqrpqgs rgtqrhqepd ddeeasvwgd ngavtvefag mapivlvvla vlwqcvligy
      121 tfslagnaad eaaraataaa sqgdaegacr eaatehlpee wreksevrcs lsghlwkadv
      181 dlgtpvlfpg agklpftvsg ragaaeeg
//
LOCUS       WP_235980756             172 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase family protein, partial
            [Streptomyces albidus (ex Kaewkla and Franco 2022)].
ACCESSION   WP_235980756
VERSION     WP_235980756.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces albidus (ex Kaewkla and Franco 2022)
  ORGANISM  Streptomyces albidus (ex Kaewkla and Franco 2022)
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00725.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Streptomyces albidus (ex Kaewkla and Franco
                     2022)"
                     /db_xref="taxon:722709"
     Protein         <1..172
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
     Region          <2..162
                     /region_name="PRK08268"
                     /note="3-hydroxy-acyl-CoA dehydrogenase; Validated"
                     /db_xref="CDD:236211"
ORIGIN      
        1 llvptwggtv adavaahglp vesvlgvdpl sldtgrrvla vtpatapeav rdaaavlatp
       61 saqigvvrdt agsvaqrlla sivsvaasia erhiaapadi dlavtaglgy phgplawger
      121 igaarmldlq ralhastgdp ryrptrwlte raqlglsltt pdfplpsgta ke
//
LOCUS       WP_235980758             248 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase, partial [Streptomyces albidus (ex Kaewkla and
            Franco 2022)].
ACCESSION   WP_235980758
VERSION     WP_235980758.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces albidus (ex Kaewkla and Franco 2022)
  ORGANISM  Streptomyces albidus (ex Kaewkla and Franco 2022)
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025052.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13671.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Streptomyces albidus (ex Kaewkla and Franco
                     2022)"
                     /db_xref="taxon:722709"
     Protein         <1..248
                     /product="AAA family ATPase"
     Region          69..209
                     /region_name="COG4639"
                     /note="Predicted kinase [General function prediction
                     only]"
                     /db_xref="CDD:443677"
ORIGIN      
        1 psqppapgap ppvpqappar hdgrhagdle vpptestghl llsrgarvei papdtdpaql
       61 dasraavavl ligpagagkt svarywadrr avptshisld dvrewvrsgf adpqsgwndh
      121 seaqyrlarr tcgfaarnfl angiscildd avfpdrpvvg lggwkrhvgp gmipvvllpg
      181 leivlernas rsgnrrlsde evanihgrma gwygsglpii dnsrqdiatt armlddvvar
      241 slaspppw
//
LOCUS       WP_235980830             185 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5941 domain-containing protein, partial [Streptomyces albidus
            (ex Kaewkla and Franco 2022)].
ACCESSION   WP_235980830
VERSION     WP_235980830.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces albidus (ex Kaewkla and Franco 2022)
  ORGANISM  Streptomyces albidus (ex Kaewkla and Franco 2022)
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040266.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19365.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Streptomyces albidus (ex Kaewkla and Franco
                     2022)"
                     /db_xref="taxon:722709"
     Protein         <1..185
                     /product="DUF5941 domain-containing protein"
     Region          1..185
                     /region_name="DUF5941"
                     /note="Family of unknown function (DUF5941); pfam19365"
                     /db_xref="CDD:466056"
ORIGIN      
        1 ligtvallat alwtpagsvw lclaavfyvl tsglavsgpl tgaldwlvpp lfrtaeyvlv
       61 lilavlagrs gvngalpaaf glvaavayhh ydtvyrirgg tgapphrlvr aigghegral
      121 vvtlaaalwl ggegrspsvp gpgqgftial ttlavaiaav vlvesirfwv sskapavhde
      181 tgepa
//
LOCUS       WP_235980844             274 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing
            protein, partial [Streptomyces albidus (ex Kaewkla and Franco
            2022)].
ACCESSION   WP_235980844
VERSION     WP_235980844.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces albidus (ex Kaewkla and Franco 2022)
  ORGANISM  Streptomyces albidus (ex Kaewkla and Franco 2022)
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 274)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02737.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Streptomyces albidus (ex Kaewkla and Franco
                     2022)"
                     /db_xref="taxon:722709"
     Protein         1..>274
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /GO_function="GO:0070403 - NAD+ binding [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
     Region          2..>274
                     /region_name="PRK08268"
                     /note="3-hydroxy-acyl-CoA dehydrogenase; Validated"
                     /db_xref="CDD:236211"
ORIGIN      
        1 mrirvvgtgv mgrgiaqwaa taghtvelad arpesvteav dfvrgmlera vakgrtssae
       61 aeavlgrlvp ldspgavreq apglvieavr edletkaalf telaevlped tvfatntssl
      121 svteigarlp dpgrlaglhf fnpvplmkia evvpgaatra gipaalaefv egcghravtv
      181 adtpgflvnh agrglateal alleesvaap adldaiardv lglrmgpfel mdltgldvta
      241 svidtiwrgf rhsdrlrpsy ltanrvtagl hgrk
//
LOCUS       WP_235980846             358 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Streptomyces albidus
            (ex Kaewkla and Franco 2022)].
ACCESSION   WP_235980846
VERSION     WP_235980846.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces albidus (ex Kaewkla and Franco 2022)
  ORGANISM  Streptomyces albidus (ex Kaewkla and Franco 2022)
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13407.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Streptomyces albidus (ex Kaewkla and Franco
                     2022)"
                     /db_xref="taxon:722709"
     Protein         1..358
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=38215
     Region          65..338
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mtdthgnqhs shnadntsrr nmlfgtaaag aalfaagcts nksnddkeea gqanvaddkp
       61 gkkvtigfag pqadhgwlna indqakrrag kyqdvtleat egsndnaqqv gqietlinkk
      121 vdvlvilpad gkaltqvglk amragipvvn ldrvfasqqa yrcwiggdny gmglnagryi
      181 geqlkdkkna kvvelagidn leltrqrteg fddalknypn ikkvarqaae ftvesgqskm
      241 aqllraetkf dalwnhdddq gvgaeraikq agrdeflmvg gagsrrvmda ikadnsvika
      301 tvlypptmaa saidlaralg qgkgvgglae feipasmtly savvtkdnvd eylptgfk
//
LOCUS       WP_235980883             389 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Streptomyces
            albidus (ex Kaewkla and Franco 2022)].
ACCESSION   WP_235980883
VERSION     WP_235980883.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces albidus (ex Kaewkla and Franco 2022)
  ORGANISM  Streptomyces albidus (ex Kaewkla and Franco 2022)
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 389)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Streptomyces albidus (ex Kaewkla and Franco
                     2022)"
                     /db_xref="taxon:722709"
     Protein         <1..389
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <1..389
                     /region_name="IolD"
                     /note="TPP-dependent trihydroxycyclohexane-1,2-dione
                     (THcHDO) dehydratase, myo-inositol metabolism
                     [Carbohydrate transport and metabolism]; COG3962"
                     /db_xref="CDD:443162"
ORIGIN      
        1 agggvhhsea edalralada tgipvastqa gkgslrhdhp cdvggightg tavaddlarg
       61 adlvigvgtr ysdfttasnt lfadpnvrfl ninvtefdah kmsaqtlvad araglealag
      121 allghrvaga yeeeytrgka swerivdsaf aakdegarpt qpqvlgalds vvgdddvvvn
      181 aagslpgdlh klwrarsprq yhleygyscm gyeipgaigv rlaapdrpvw alvgdgtylm
      241 lptelvtavq egvninvvll qnhgyasigg lseqtgaerf gtayryraad gtytgeplpv
      301 dlaanaaslg mdviraetlg elrtglaqar aserptcvyv etdtsasapa apgasawwdv
      361 vvaetsdrpa trkareeyer haatrrrhl
//
LOCUS       WP_235980904             145 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: transposase [Limosilactobacillus].
ACCESSION   WP_235980904
VERSION     WP_235980904.1
KEYWORDS    RefSeq.
SOURCE      Limosilactobacillus
  ORGANISM  Limosilactobacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02371.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Limosilactobacillus"
                     /db_xref="taxon:2742598"
     Protein         1..145
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=16312
     Region          <1..144
                     /region_name="COG3547"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442768"
ORIGIN      
        1 mtalarelpe ynkllsipgl gartvvslig elgdirrfrn snalnafigi dlrhyesgdy
       61 vandhiskrg ntvarkilfk aiqniasaah yhpnhindyy qrrkmdagqy gtkkiaiaai
      121 hrlirtiyhl vinnqfydys latkg
//
LOCUS       WP_235980964             247 aa            linear   BCT 02-MAR-2025
DEFINITION  MAE_28990/MAE_18760 family HEPN-like nuclease [Limosilactobacillus
            portuensis].
ACCESSION   WP_235980964
VERSION     WP_235980964.1
KEYWORDS    RefSeq.
SOURCE      Limosilactobacillus portuensis
  ORGANISM  Limosilactobacillus portuensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Limosilactobacillus.
REFERENCE   1  (residues 1 to 247)
  AUTHORS   Anantharaman,V., Makarova,K.S., Burroughs,A.M., Koonin,E.V. and
            Aravind,L.
  TITLE     Comprehensive analysis of the HEPN superfamily: identification of
            novel roles in intra-genomic conflicts, defense, pathogenesis and
            RNA processing
  JOURNAL   Biol Direct 8, 15 (2013)
   PUBMED   23768067
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037890.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18737.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Limosilactobacillus portuensis"
                     /db_xref="taxon:2742601"
     Protein         1..247
                     /product="MAE_28990/MAE_18760 family HEPN-like nuclease"
                     /calculated_mol_wt=28537
     Region          55..243
                     /region_name="HEPN_RiboL-PSP"
                     /note="RiboL-PSP-HEPN; cl39023"
                     /db_xref="CDD:476849"
ORIGIN      
        1 mkeqpnfndr vdelrfyiki lnklykliil hkddknaysp ygqylknvid kcgqkqdsst
       61 flvilksnal mmmynliest vkqqivnvyt sinneqlnfk qldnyykelf kkyafkgedg
      121 selestqriv nassklisei lnnrslefki nkfklsgnad lrkikqifne hdislnhesi
      181 sqygnellti knsrnslahg sdtfsnagsk ltaqeisqya ddvisfleyl itetdkfikl
      241 ksykits
//
LOCUS       WP_235980978             931 aa            linear   BCT 02-MAR-2025
DEFINITION  lantibiotic dehydratase [Streptomyces albidus (ex Kaewkla and
            Franco 2022)].
ACCESSION   WP_235980978
VERSION     WP_235980978.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces albidus (ex Kaewkla and Franco 2022)
  ORGANISM  Streptomyces albidus (ex Kaewkla and Franco 2022)
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 931)
  AUTHORS   Ortega,M.A., Hao,Y., Zhang,Q., Walker,M.C., van der Donk,W.A. and
            Nair,S.K.
  TITLE     Structure and mechanism of the tRNA-dependent lantibiotic
            dehydratase NisB
  JOURNAL   Nature 517 (7535), 509-512 (2015)
   PUBMED   25363770
REFERENCE   2  (residues 1 to 931)
  AUTHORS   Xie,L., Chatterjee,C., Balsara,R., Okeley,N.M. and van der
            Donk,W.A.
  TITLE     Heterologous expression and purification of SpaB involved in
            subtilin biosynthesis
  JOURNAL   Biochem Biophys Res Commun 295 (4), 952-957 (2002)
   PUBMED   12127987
REFERENCE   3  (residues 1 to 931)
  AUTHORS   Karakas Sen,A., Narbad,A., Horn,N., Dodd,H.M., Parr,A.J.,
            Colquhoun,I. and Gasson,M.J.
  TITLE     Post-translational modification of nisin. The involvement of NisB
            in the dehydration process
  JOURNAL   Eur J Biochem 261 (2), 524-532 (1999)
   PUBMED   10215865
REFERENCE   4  (residues 1 to 931)
  AUTHORS   Klein,C., Kaletta,C., Schnell,N. and Entian,K.D.
  TITLE     Analysis of genes involved in biosynthesis of the lantibiotic
            subtilin
  JOURNAL   Appl Environ Microbiol 58 (1), 132-142 (1992)
   PUBMED   1539969
  REMARK    Erratum:[Appl Environ Microbiol 1992 May;58(5):1795]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016615.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04738.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..931
                     /organism="Streptomyces albidus (ex Kaewkla and Franco
                     2022)"
                     /db_xref="taxon:722709"
     Protein         1..931
                     /product="lantibiotic dehydratase"
                     /calculated_mol_wt=103020
     Region          163..838
                     /region_name="Lant_dehydr_N"
                     /note="Lantibiotic dehydratase, N terminus; pfam04738"
                     /db_xref="CDD:428098"
ORIGIN      
        1 mtsvtttwep grrfmlrvag lpvesvhalr cteslhwake vldaedrlrv raaelsdvlh
       61 dlvtttdtav rgsgdasrrq llalrrqmfn nrlpadpaaa melisgldae agrqvadwla
      121 rrqqleelht ageqllasdl ersraalrel mkeerlrlgl llasptldgq legylskaaa
      181 gvrpdkrmrk versllsyly rtacktspfs tftgvatglf tdggdephge rngsdaaaiq
      241 vdagwesrar lnvvvlgrla eliladparr sdlpvrlasg wgrdedrvry vrrwvtagdd
      301 aatvtfdsvk drlfflrrsg ildqllalfd erpelryrel adwigaehda ppeqcetyls
      361 allqlgmirv pcldtdvhsp dplrsfqtal rglgrpwaeq iadglegpla kiaafpaadv
      421 rrrasllrel reelhglqrq lgaqepslpq tilyedvsag tdvacpwqdw ngrvgedlra
      481 lesvlpafdv tlpqritfkg fflarhgrgg rcedllglvh dfhedffdqy lsftakrraf
      541 ndqgeyvpee nwlnipgika vdsarrvfvd rmrklwaerd gdaeiqlgre hfeevaaeia
      601 pvspvfapqs hhlqlareng dplvvvnrsy ggvsfpfsrf thvydgpegg ealsgalrer
      661 araqtppgav laevtggsvt snlnlhgrlt dyeivcpget stvpeearih ledlyvehde
      721 eadrlvlrss rldcevvpvy lgylvplalp eisrtlllls ptsmarldvw ggvpepeade
      781 gvtvrprvrh gglvlsrrsw sttaaslpar qqpgveehtw flgwqrwrrr hglparvfat
      841 vasgprgaag akpscvdlds slsltafeal lkgdedqvvl remlptedgl hvrsergshv
      901 aelavetftt pgpaapdass lptrpakdap r
//
LOCUS       WP_235980989             332 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase domain-containing protein [Streptomyces albidus
            (ex Kaewkla and Franco 2022)].
ACCESSION   WP_235980989
VERSION     WP_235980989.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces albidus (ex Kaewkla and Franco 2022)
  ORGANISM  Streptomyces albidus (ex Kaewkla and Franco 2022)
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025033.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13649.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Streptomyces albidus (ex Kaewkla and Franco
                     2022)"
                     /db_xref="taxon:722709"
     Protein         1..332
                     /product="methyltransferase domain-containing protein"
                     /calculated_mol_wt=35438
     Region          6..329
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(43..49,67..68,94..96,113)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
ORIGIN      
        1 mttpvwdphq ylrhsghrsr piedliarvp elpnedapri adlgcgpggp svalatrwpa
       61 ghitgydnsp amlhearaya grtsaggsld fshgdlatwr papgerfdll fsnaalhwvl
      121 paagqgrvlp aegkgrvtsa egkgrvlpae gegrvspvee htdasdaaae grapgfealf
      181 pawidalppg gvlafqvpgn ftspshtlll elrnssrwrd rlgsesrsls vldpvgymae
      241 laplgcevda westyahllh genpvldwve gtalrpvltl laddpaaqee fvaeygellr
      301 eaypplngdv sqgtvfpfrr ifvvatkdga as
//
LOCUS       WP_235980867              96 aa            linear   BCT 02-MAR-2025
DEFINITION  ribosomal protein L7/L12 [Streptomyces albidus (ex Kaewkla and
            Franco 2022)].
ACCESSION   WP_235980867
VERSION     WP_235980867.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces albidus (ex Kaewkla and Franco 2022)
  ORGANISM  Streptomyces albidus (ex Kaewkla and Franco 2022)
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 96)
  AUTHORS   Leijonmarck,M. and Liljas,A.
  TITLE     Structure of the C-terminal domain of the ribosomal protein L7/L12
            from Escherichia coli at 1.7 A
  JOURNAL   J Mol Biol 195 (3), 555-579 (1987)
   PUBMED   3309338
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00542.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Streptomyces albidus (ex Kaewkla and Franco
                     2022)"
                     /db_xref="taxon:722709"
     Protein         1..96
                     /product="ribosomal protein L7/L12"
                     /GO_function="GO:0003735 - structural constituent of
                     ribosome [Evidence IEA]"
                     /GO_process="GO:0006412 - translation [Evidence IEA]"
                     /calculated_mol_wt=10497
     Region          <24..92
                     /region_name="PRK06771"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:180688"
ORIGIN      
        1 meptllitlv vvvlalagav qskldrtdrr iarlnrkvdl ildhlhiqef asaelhsvgm
       61 liqqgkriea iklyrqitgt glkeakeavd amagtr
//
LOCUS       WP_235981090              86 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: PAS domain-containing protein [Limosilactobacillus].
ACCESSION   WP_235981090
VERSION     WP_235981090.1
KEYWORDS    RefSeq.
SOURCE      Limosilactobacillus
  ORGANISM  Limosilactobacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024983.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13596.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Limosilactobacillus"
                     /db_xref="taxon:2742598"
     Protein         1..86
                     /product="PAS domain-containing protein"
                     /calculated_mol_wt=9682
     Region          <1..55
                     /region_name="COG2461"
                     /note="Uncharacterized conserved protein AF0170, contains
                     SAB, hemerythrin HHE, and PAS domains [General function
                     prediction only]"
                     /db_xref="CDD:441993"
ORIGIN      
        1 mvkqvlkmlk teekdmvesp qimdgqrtli ryyairkpng hylgalqvte nvehicrlce
       61 qhtfehgive gqvvdgvssa sinenk
//
LOCUS       WP_235981108             221 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5682 family protein, partial [Streptomyces albidus (ex Kaewkla
            and Franco 2022)].
ACCESSION   WP_235981108
VERSION     WP_235981108.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces albidus (ex Kaewkla and Franco 2022)
  ORGANISM  Streptomyces albidus (ex Kaewkla and Franco 2022)
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040143.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18934.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Streptomyces albidus (ex Kaewkla and Franco
                     2022)"
                     /db_xref="taxon:722709"
     Protein         <1..221
                     /product="DUF5682 family protein"
     Region          <1..208
                     /region_name="DUF5682"
                     /note="Family of unknown function (DUF5682); pfam18934"
                     /db_xref="CDD:436841"
ORIGIN      
        1 ppacagldad gavqmrrhid gvhqsialle qagasatgvh srwltvlrrl aardripgli
       61 rgrctrllld dgklehaeaa rlmglalspg tapaqaaawi egflsgsgml lvhderllal
      121 idgwlaavpv daftdvlpll rrtfsafepg vrrtvgelvr rggladaagg ggaaageggv
      181 rhpstrgfgp gldvaradav lpvlrqllsg garevgeeav v
//
LOCUS       WP_235981195             358 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Streptomyces albidus (ex Kaewkla and
            Franco 2022)].
ACCESSION   WP_235981195
VERSION     WP_235981195.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces albidus (ex Kaewkla and Franco 2022)
  ORGANISM  Streptomyces albidus (ex Kaewkla and Franco 2022)
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 358)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 358)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 358)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 358)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Streptomyces albidus (ex Kaewkla and Franco
                     2022)"
                     /db_xref="taxon:722709"
     Protein         1..>358
                     /product="ATP-binding protein"
     Region          154..350
                     /region_name="KdpD"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; COG2205"
                     /db_xref="CDD:441807"
ORIGIN      
        1 msfeggldas gspasgsdgn vlwsvlggal llvcgvivga aysatiears alerhtslrr
       61 tvargqsevr sllrsleqge rprlrprpal pdpsahaday dllthelala qhvaetavte
      121 avalmrsnss gseekvevfv nlarrlqslv hreielldel enqvedpdll kglfhvdhla
      181 trirrhaenl avlggavsrr qwsrpvtmte vlrssiaeve qyprvklvpp iegtlrghav
      241 advihllael venatvfsap qtqvllraqh vtsglaieve drglgmtate qnrmnavlsd
      301 peridvgell qdgriglfvv salaqrhgiv vqlqsniygg iqavlvlpre vlgeepga
//
LOCUS       WP_235981199             143 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Streptomyces albidus (ex Kaewkla and Franco 2022)].
ACCESSION   WP_235981199
VERSION     WP_235981199.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces albidus (ex Kaewkla and Franco 2022)
  ORGANISM  Streptomyces albidus (ex Kaewkla and Franco 2022)
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 143)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Streptomyces albidus (ex Kaewkla and Franco
                     2022)"
                     /db_xref="taxon:722709"
     Protein         <1..143
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <1..137
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 lprgvrlvpl lddpyravlp rghrlaaerv ldladladep wvgserhgpc revvldacsa
       61 agftpgvvve sedhataqgf vaaglgvalv ptlglggrhp gvvvrrirkp epvrvicaav
      121 rgtspvppal qglldalraa aer
//
LOCUS       WP_235981237              69 aa            linear   BCT 02-MAR-2025
DEFINITION  methylmalonyl-CoA mutase family protein, partial [Streptomyces
            albidus (ex Kaewkla and Franco 2022)].
ACCESSION   WP_235981237
VERSION     WP_235981237.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces albidus (ex Kaewkla and Franco 2022)
  ORGANISM  Streptomyces albidus (ex Kaewkla and Franco 2022)
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 69)
  AUTHORS   Mancia,F., Keep,N.H., Nakagawa,A., Leadlay,P.F., McSweeney,S.,
            Rasmussen,B., Bosecke,P., Diat,O. and Evans,P.R.
  TITLE     How coenzyme B12 radicals are generated: the crystal structure of
            methylmalonyl-coenzyme A mutase at 2 A resolution
  JOURNAL   Structure 4 (3), 339-350 (1996)
   PUBMED   8805541
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013781.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01642.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Streptomyces albidus (ex Kaewkla and Franco
                     2022)"
                     /db_xref="taxon:722709"
     Protein         <1..69
                     /product="methylmalonyl-CoA mutase family protein"
                     /GO_function="GO:0016866 - intramolecular transferase
                     activity [Evidence IEA]"
                     /GO_function="GO:0031419 - cobalamin binding [Evidence
                     IEA]"
     Region          <15..65
                     /region_name="Sbm"
                     /note="Methylmalonyl-CoA mutase, N-terminal domain/subunit
                     [Lipid transport and metabolism]; COG1884"
                     /db_xref="CDD:441488"
ORIGIN      
        1 prascsrast nrpkqaavta alarlretae gtgnvlppmk ealraratvg evcgalrdvw
       61 gtyvpadav
//
LOCUS       WP_235981340             534 aa            linear   BCT 02-MAR-2025
DEFINITION  nitroreductase family protein [Aquipseudomonas ullengensis].
ACCESSION   WP_235981340
VERSION     WP_235981340.1
KEYWORDS    RefSeq.
SOURCE      Aquipseudomonas ullengensis
  ORGANISM  Aquipseudomonas ullengensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Aquipseudomonas.
REFERENCE   1  (residues 1 to 534)
  AUTHORS   de Oliveira,I.M., Henriques,J.A. and Bonatto,D.
  TITLE     In silico identification of a new group of specific bacterial and
            fungal nitroreductases-like proteins
  JOURNAL   Biochem Biophys Res Commun 355 (4), 919-925 (2007)
   PUBMED   17331467
REFERENCE   2  (residues 1 to 534)
  AUTHORS   Hecht,H.J., Erdmann,H., Park,H.J., Sprinzl,M. and Schmid,R.D.
  TITLE     Crystal structure of NADH oxidase from Thermus thermophilus
  JOURNAL   Nat Struct Biol 2 (12), 1109-1114 (1995)
   PUBMED   8846223
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013077.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00881.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Aquipseudomonas ullengensis"
                     /db_xref="taxon:2759166"
     Protein         1..534
                     /product="nitroreductase family protein"
                     /calculated_mol_wt=58855
     Region          84..231
                     /region_name="McbC_SagB-like_oxidoreductase"
                     /note="oxidase similar to the microcin B17 processing
                     protein McbC; cd02142"
                     /db_xref="CDD:380318"
     Site            order(105..107,109,185,188..189,194,198,209..212)
                     /site_type="other"
                     /note="FMN binding site [chemical binding]"
                     /db_xref="CDD:380318"
     Region          309..512
                     /region_name="Nitro_FMN_reductase"
                     /note="nitroreductase family protein; cl00514"
                     /db_xref="CDD:444950"
     Site            order(319,321..322,324,353..354,356,358,360,362..364,
                     367..369,461,463..464,467..468,471..472,484..485,495)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:380311"
ORIGIN      
        1 mnkeqqvray helskhqpqr yapgpgqldw atqpaafrry egarlielwh rpqeespsyd
       61 safagpaatp aplnraslsq vlydslalsa wkesggnrwa lrvnpssgnl hpteaylllp
      121 sealedgall ahyapdvhal evraelaepl arqlaaalpa ggfllglssi pwreawkyge
      181 rayrycqhdl ghalaalaia asiqgwqvrl lrgvaelrld allgldrpgf heaewadcll
      241 wigpaqaeef plpaalldgl aaqdlsgqpn rlsreyrqwp elervhalcr apalpavpwh
      301 aeaglvavdn pglplrpilh rrrsaqsmdg rsgiqaellf awlrrvlpan apvpfalage
      361 paqvdlllfv hrvqgldpgl ywlargddqa qpgmrgdflw qrahpqlply rlltgdargl
      421 saflscgqdi asdgcvavam larfdqalaq gpwqypqlyr ecgqigqvly leaeaaglsa
      481 tgigcffdds lhellelads rwqslyhfti gravwderls sqpayiepri ppqp
//
LOCUS       WP_235981409             168 aa            linear   BCT 02-MAR-2025
DEFINITION  prepilin-type N-terminal cleavage/methylation domain-containing
            protein [Aquipseudomonas ullengensis].
ACCESSION   WP_235981409
VERSION     WP_235981409.1
KEYWORDS    RefSeq.
SOURCE      Aquipseudomonas ullengensis
  ORGANISM  Aquipseudomonas ullengensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Aquipseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019575.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07963.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Aquipseudomonas ullengensis"
                     /db_xref="taxon:2759166"
     Protein         1..168
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /calculated_mol_wt=17476
ORIGIN      
        1 mspvstisrg rpdagfaqrg mtlvelviti viigiaaaam fsamaaisgr sadpmlrqqs
       61 laiaeaymee islqafplnt pcatdnngsg rgnfddvcdy nglyydgtqp faprsaisst
      121 alagleayqv lvgvssqtln gvaamrilvs vtdpagqllv ltgyrtsy
//
LOCUS       WP_235981430             814 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Aquipseudomonas ullengensis].
ACCESSION   WP_235981430
VERSION     WP_235981430.1
KEYWORDS    RefSeq.
SOURCE      Aquipseudomonas ullengensis
  ORGANISM  Aquipseudomonas ullengensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Aquipseudomonas.
REFERENCE   1  (residues 1 to 814)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Aquipseudomonas ullengensis"
                     /db_xref="taxon:2759166"
     Protein         1..814
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=89069
     Region          <242..798
                     /region_name="PRK09776"
                     /note="putative diguanylate cyclase; Provisional"
                     /db_xref="CDD:182070"
ORIGIN      
        1 msqetsarsa rmtsqllrlv wpfalvillq vlmaggslyv lsavrayvgg eslwskglkd
       61 ailyldlyar tgnpeyldny qqalavplgd hafrvildga qpdlaaaraa ilqgrnhpdd
      121 vdgmiwlfrn frhfsyldra ieqwqvgdry ifelselaae iqqgigrgpv rleqtldwqa
      181 rigqinhgat paaeafsgil geasravmrl livanlatai lliglallrt rnllaqreha
      241 dqalreekqr aqltlasigd avislerdgc vaymnpaaer lascqaatal gqpfetlfsi
      301 vdeypneage ssvrqilagq emppgdhakl ivrpdgssva vnlvgtpilt dgrvsgavmv
      361 lhdmtrerqy vanlswqash daltglanrr efeyrlaqll arqmrqvgrh almfldldqf
      421 klvndtcgha agdellrevc tslqhhvreg dtlarlggde fgvilencpa eaaarvaeal
      481 rkavqdvrfn wggrsfsisv siglvqippg qtslaellrt adlacysake kgrnrvhafq
      541 pddselslrv gemswvqrih aaleegrfrl yaqrivalhg gegdhleill rlhdetgqlv
      601 gpgtfipaae ryglmplidr wvvrntfqal alhlqdegar plscainlsg asigdsaflg
      661 flreqfssqg ippqlicfei tetaaianlg datrfinelk vlgcrfsldd fgagmssfmy
      721 lkhlpvdflk idgsfvrdml vdpidramve vinhighvlg kltvaefves eailaalrei
      781 gidyaqgyvl dvpkpfelsa gipsaaprvp nsag
//
LOCUS       WP_235981701             195 aa            linear   BCT 02-MAR-2025
DEFINITION  protein phosphatase CheZ [Methylobrevis albus].
ACCESSION   WP_235981701
VERSION     WP_235981701.1
KEYWORDS    RefSeq.
SOURCE      Methylobrevis albus
  ORGANISM  Methylobrevis albus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Pleomorphomonadaceae; Methylobrevis.
REFERENCE   1  (residues 1 to 195)
  AUTHORS   Zhao,R., Collins,E.J., Bourret,R.B. and Silversmith,R.E.
  TITLE     Structure and catalytic mechanism of the E. coli chemotaxis
            phosphatase CheZ
  JOURNAL   Nat Struct Biol 9 (8), 570-575 (2002)
   PUBMED   12080332
  REMARK    Erratum:[Nat Struct Biol 2002 Sep;9(9):711]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016247.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04344.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Methylobrevis albus"
                     /db_xref="taxon:2793297"
     Protein         1..195
                     /product="protein phosphatase CheZ"
                     /EC_number="3.6.1.-"
                     /GO_component="GO:0009288 - bacterial-type flagellum
                     [Evidence IEA]"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_process="GO:0050920 - regulation of chemotaxis
                     [Evidence IEA]"
                     /calculated_mol_wt=21325
     Region          <87..195
                     /region_name="CheZ"
                     /note="Phosphoaspartate phosphatase CheZ, dephosphorylates
                     CheY;
                     P [Cell motility, Signal transduction mechanisms];
                     COG3143"
                     /db_xref="CDD:442377"
ORIGIN      
        1 miqptqevsq avlddyrrqf aeamklkdel deiqqailqt kreiatlhvn nfegremtrv
       61 tdeldavvng teaateaila aaehiddaan tlaartkgqd nalaadiqer vvtifeacnf
      121 qdltgqritk vvnalrfied rvsrmieiwg gmesfasvea etrakaegda allngpslvt
      181 dddiasqddi dalfa
//
LOCUS       WP_235981709             295 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Methylobrevis albus].
ACCESSION   WP_235981709
VERSION     WP_235981709.1
KEYWORDS    RefSeq.
SOURCE      Methylobrevis albus
  ORGANISM  Methylobrevis albus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Pleomorphomonadaceae; Methylobrevis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Methylobrevis albus"
                     /db_xref="taxon:2793297"
     Protein         1..295
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=32152
     Region          <179..294
                     /region_name="GlxA"
                     /note="Transcriptional regulator GlxA, contains an amidase
                     domain and an AraC-type DNA-binding HTH domain
                     [Transcription]; COG4977"
                     /db_xref="CDD:444002"
ORIGIN      
        1 mnpfrpqmtt riagfsvatl ktrsfdgvaa dlwqvrcaat aggdyvgrdp rivvvleahg
       61 ggafdfetaa grtrqrfgnr plisfvpadl pmtgtvvglt glrhldihfd laalrrrfga
      121 aldpeqletp rvmfdddrta alarliaaei dsdrplddly geslftalia glfevaappa
      181 rrrsslpdrt lrrvcafiee ncarpiriee laaiaglsps hfghafkaaa gvaphqwqla
      241 arvrraqaml rqpsaslvdi aaatgfcdqp hftrvfrriv gvtprvwlre tagrc
//
LOCUS       WP_235981023             258 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: homoserine O-acetyltransferase/O-succinyltransferase
            family protein [Limosilactobacillus].
ACCESSION   WP_235981023
VERSION     WP_235981023.1
KEYWORDS    RefSeq.
SOURCE      Limosilactobacillus
  ORGANISM  Limosilactobacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae.
REFERENCE   1  (residues 1 to 258)
  AUTHORS   Bogicevic,B., Berthoud,H., Portmann,R., Bavan,T., Meile,L. and
            Irmler,S.
  TITLE     Cysteine biosynthesis in Lactobacillus casei: identification and
            characterization of a serine acetyltransferase
  JOURNAL   FEMS Microbiol Lett 363 (4) (2016)
   PUBMED   26790714
REFERENCE   2  (residues 1 to 258)
  AUTHORS   Zubieta,C., Krishna,S.S., McMullan,D., Miller,M.D., Abdubek,P.,
            Agarwalla,S., Ambing,E., Astakhova,T., Axelrod,H.L., Carlton,D.,
            Chiu,H.J., Clayton,T., Deller,M., DiDonato,M., Duan,L.,
            Elsliger,M.A., Grzechnik,S.K., Hale,J., Hampton,E., Han,G.W.,
            Haugen,J., Jaroszewski,L., Jin,K.K., Klock,H.E., Knuth,M.W.,
            Koesema,E., Kumar,A., Marciano,D., Morse,A.T., Nigoghossian,E.,
            Oommachen,S., Reyes,R., Rife,C.L., van den Bedem,H., Weekes,D.,
            White,A., Xu,Q., Hodgson,K.O., Wooley,J., Deacon,A.M., Godzik,A.,
            Lesley,S.A. and Wilson,I.A.
  TITLE     Crystal structure of homoserine O-succinyltransferase from Bacillus
            cereus at 2.4 A resolution
  JOURNAL   Proteins 68 (4), 999-1005 (2007)
   PUBMED   17546672
REFERENCE   3  (residues 1 to 258)
  AUTHORS   Coe,D.M. and Viola,R.E.
  TITLE     Assessing the roles of essential functional groups in the mechanism
            of homoserine succinyltransferase
  JOURNAL   Arch Biochem Biophys 461 (2), 211-218 (2007)
   PUBMED   17442255
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016120.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04204.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Limosilactobacillus"
                     /db_xref="taxon:2742598"
     Protein         1..258
                     /product="homoserine
                     O-acetyltransferase/O-succinyltransferase family protein"
                     /EC_number="2.3.1.46"
                     /calculated_mol_wt=30028
     Region          1..252
                     /region_name="GAT_1"
                     /note="Type 1 glutamine amidotransferase (GATase1)-like
                     domain; cl00020"
                     /db_xref="CDD:469582"
     Site            99
                     /site_type="active"
                     /note="conserved cys residue [active]"
                     /db_xref="CDD:153225"
ORIGIN      
        1 mptketterq flesfnkltq dveltflypa thhfknisfs aitkayvsle eienysfdgl
       61 iitgapveql afqqvdywee frticdwaer htkqsllecw aalgglyndy qikkhqlsqk
      121 ifgiyqatgi nrcnqlaehl tnqqlvipqs rhsspnvdpe nlpddlqiva enneigpliy
      181 hspgkhrtyi tghpeyeadt laqeyyrdlk krlpiqeprn yfsnrntgei kyswrksstq
      241 iyqnwlntft qqkvgtlv
//
LOCUS       WP_235981776             445 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Novosphingobium aerophilum].
ACCESSION   WP_235981776
VERSION     WP_235981776.1
KEYWORDS    RefSeq.
SOURCE      Novosphingobium aerophilum
  ORGANISM  Novosphingobium aerophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Novosphingobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Novosphingobium aerophilum"
                     /db_xref="taxon:2839843"
     Protein         1..445
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45106
     Region          22..409
                     /region_name="2A0115"
                     /note="benzoate transport; TIGR00895"
                     /db_xref="CDD:273327"
ORIGIN      
        1 mvdaaggaga vaddprqrla rapmtgrqlv aiamcvllna ldgfdvlsis faspgiskew
       61 gidrpalgvv lsmeligmmv gsvllgqlad rvgrrstvma clvimaagmv attqvgsiea
      121 laatrlftgl giggmlavin alaaefaner srgaavaima agypvggiag gaiasgllaq
      181 gdwrdvfwlg agltavflpl vpllvpepvs allqrrgpdt leqvnrslva lghaptdrlp
      241 pvdpvaress iaelfrggma vttglltiiy fsqlltfyfv lkwspkivad mgfapssags
      301 vlvwgnvggl agsllysals vrvptrvlls gfmiascaav alfghspadl tllalaaata
      361 qfcangvivg lyglvassfp tanraggtgf viglgrggaa ispvlggylf kagfslpvva
      421 gfmatgslva laallllprr aaesc
//
LOCUS       WP_235981890             499 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6513 domain-containing protein [Methylobrevis albus].
ACCESSION   WP_235981890
VERSION     WP_235981890.1
KEYWORDS    RefSeq.
SOURCE      Methylobrevis albus
  ORGANISM  Methylobrevis albus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Pleomorphomonadaceae; Methylobrevis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040121.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20123.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Methylobrevis albus"
                     /db_xref="taxon:2793297"
     Protein         1..499
                     /product="DUF6513 domain-containing protein"
                     /calculated_mol_wt=53811
     Region          7..92
                     /region_name="DUF6513"
                     /note="Family of unknown function (DUF6513); pfam20123"
                     /db_xref="CDD:437955"
     Region          128..306
                     /region_name="Pterin_binding"
                     /note="Pterin binding enzymes. This family includes
                     dihydropteroate synthase (DHPS) and cobalamin-dependent
                     methyltransferases such as methyltetrahydrofolate,
                     corrinoid iron-sulfur protein methyltransferase (MeTr) and
                     methionine synthase (MetH). DHPS, a...; cl00219"
                     /db_xref="CDD:444759"
     Site            278..280
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:238242"
     Region          <404..437
                     /region_name="DUF4346"
                     /note="Domain of unknown function (DUF4346); pfam14251"
                     /db_xref="CDD:405014"
ORIGIN      
        1 mttaarehia lltgqlaear ltgtmnelgr dafdwtivdv gvkvaalmte kiirrrvtlp
       61 agitrvvlpg rcradlaala ehfavpverg pdeivdlpry fgrgmrppdl trhdlsifae
      121 iteaseisva etvakahrlr aagadvidig glpdtpfphl getvralkae gfrvsvdsfs
      181 tdelrtgaaa gcdfllslne etlalaqefp atvpvlvpar qgdleslfra aaqmdawglr
      241 yladpildpi hfgfaaslar yhafrarfpd aemlmgtgnl telteadtsg itamllgvcs
      301 elsirnvlvv qvsphtrrti eehdaarrim faakrdhalp kgysgalasl hdrvpyantp
      361 egvriaaggv rdpnyrievv adgihvynrd rhlvhtdafd ffpelgvetd gshafylgae
      421 laraeiafal gkryaqdnpl dwgaaadirt edltrlqeag htlkskraqq daeraggeap
      481 dpvaavagda sdpvpgged
//
LOCUS       WP_235981898             470 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Methylobrevis albus].
ACCESSION   WP_235981898
VERSION     WP_235981898.1
KEYWORDS    RefSeq.
SOURCE      Methylobrevis albus
  ORGANISM  Methylobrevis albus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Pleomorphomonadaceae; Methylobrevis.
REFERENCE   1  (residues 1 to 470)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 470)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 470)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 470)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Methylobrevis albus"
                     /db_xref="taxon:2793297"
     Protein         1..470
                     /product="ATP-binding protein"
                     /calculated_mol_wt=50161
     Region          174..468
                     /region_name="PRK10755"
                     /note="two-component system sensor histidine kinase PmrB"
                     /db_xref="CDD:236751"
ORIGIN      
        1 msgdpteaaa amgrdrrqrs psllrivalr illfgmlamg ievaivfaey wfddpnlgrs
       61 lieieaeala hglverdgrl ayvlpadart ryrtggpdld edggqgyfar irtldgtvlf
      121 sncgeecteh flpltvnpps fwqrslspgk pldvvggqsv diggrrvaie lavlrdpdhr
      181 vlqvilhevf dhmvvpmtlm ltlvigasiw svrsalrpva aaarqaelid prdagaript
      241 agmprevavl aaavnrafgr vgevirgqsl fasaiaheir tpvaivklel ehidhprakk
      301 aladldglth vleqltalar ldavdvgamr pvalgelsaa tiesmapyvy drgktitlvd
      361 rgggevraia glienlirnl venavrhtpp gtaitvtvgp gpelsvaddg pglpddepid
      421 lgheavlkra gglgigrkiv qriaeihgat lettssraag tcvrlvfpvv
//
LOCUS       WP_235981907             640 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase family protein [Methylobrevis albus].
ACCESSION   WP_235981907
VERSION     WP_235981907.1
KEYWORDS    RefSeq.
SOURCE      Methylobrevis albus
  ORGANISM  Methylobrevis albus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Pleomorphomonadaceae; Methylobrevis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04851.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Methylobrevis albus"
                     /db_xref="taxon:2793297"
     Protein         1..640
                     /product="DEAD/DEAH box helicase family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=72171
     Region          10..200
                     /region_name="PLDc_N_DEXD_a"
                     /note="N-terminal putative catalytic domain of
                     uncharacterized prokaryotic and archeal HKD family
                     nucleases fused to a DEAD/DEAH box helicase domain;
                     cd09179"
                     /db_xref="CDD:197276"
     Site            order(139,141,158,160,170)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197276"
     Site            139
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197276"
     Region          162..>601
                     /region_name="SSL2"
                     /note="Superfamily II DNA or RNA helicase [Transcription,
                     Replication, recombination, and repair]; COG1061"
                     /db_xref="CDD:440681"
ORIGIN      
        1 mslrdlpikp sfntstdqil esfiipalgr avqydrgvgf ftsewvrlaa tglaalasag
       61 gkarivaspk ldqddwnalv qgydaradtq laaamravlh eleagsrtqt latlawmvad
      121 glldlkiaip aaeldgdfhd kfgifidsgs dmvafrgspn dserafrnye sisvyyswvd
      181 ereaaralee kerfvriwen rdpnlrvhti pdairrdlvq lttrlerpyr lprdgrsyrw
      241 rhqgeaitaf lqaqrgvlem atgtgktrta lsiveelrrr daitgaivca ygtdlldqwy
      301 relltrtdlp iyreyaehre glgylngdda svllisrqnl vnvlsklpaq rqqksllicd
      361 evhgmgssai vealtarldg fvyrlglsat peraydaagn dfveanigpv iyrftleqai
      421 lrgilcefdy vdleyefsed dkaavrqair khfarangpd pqpqeqlfqe larirklsqq
      481 klapfrayaa dhvdilrrsl ifvetaeygf lvqqilmdmg ldfhtyygdd dranlrrfad
      541 geleclvtck risegidiss vgaivlfasa rsrletvqrl grclridpad pekraavvdf
      601 irtddleese inpettaded rrawfqtlaq vrraeedlei
//
LOCUS       WP_235981929             517 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Novosphingobium aerophilum].
ACCESSION   WP_235981929
VERSION     WP_235981929.1
KEYWORDS    RefSeq.
SOURCE      Novosphingobium aerophilum
  ORGANISM  Novosphingobium aerophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Novosphingobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Novosphingobium aerophilum"
                     /db_xref="taxon:2839843"
     Protein         1..517
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=55352
     Region          81..468
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(91..92,95..96,99,132,182..183,185..187,190,210,
                     213..214,217,318,321..322,326..328,331,360,364,415..416,
                     420,424,444,447..448,451..452,455)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mgapqfsrth hkqtihqsvf vcktdnvgps etvtgnarec gerkrmtlet alaatgdaap
       61 inaedggaad qrataagywa llvivlatfi tffdqvlfgm laerikhdfg ltdsqlgfla
      121 gpagiicylf vgiplarlad iyprkyvlag gvavigtiis lgglaqnfaq fvgtriflaa
      181 ggsahapssy slladafppr rltrafallq fgfiggttlg pwiggmlvmm aagwapsqfg
      241 plrifgwqwv mivtglpall vallfltvre psrqapppns srpplegslg rkvltfmgld
      301 afrainarpq vfyplfgala lsaidvfgmq fwrtpflirt ygwneaqigr alggimlvss
      361 lsglllggvl vewlakrykd anvraaaicf agvtvcsils plmpsaelsl avmapsaafg
      421 magavpqnaa vqriapnalr gqvtaiylfm ftffgamgsf figlvqdfvi vaeqdlwksl
      481 vlcagllmpl atylmvramr pyreelerle aqevtpa
//
LOCUS       WP_235981951             332 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR family transcriptional regulator [Novosphingobium aerophilum].
ACCESSION   WP_235981951
VERSION     WP_235981951.1
KEYWORDS    RefSeq.
SOURCE      Novosphingobium aerophilum
  ORGANISM  Novosphingobium aerophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Novosphingobium.
REFERENCE   1  (residues 1 to 332)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012354.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00126.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Novosphingobium aerophilum"
                     /db_xref="taxon:2839843"
     Protein         1..332
                     /product="LysR family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=36449
     Region          13..304
                     /region_name="PRK11139"
                     /note="DNA-binding transcriptional activator GcvA;
                     Provisional"
                     /db_xref="CDD:182990"
ORIGIN      
        1 mgvhaigphg finrrwlpln alrafeavgs rlsftagaqa ltvtqsamsr hvssledlig
       61 kplfersasg lrltpageml lpvvskcldr ieqtlnmvrd qtlesrplrv hippsllyqt
      121 alpllhgfrr ehpdiridvc tsnvtgpppg nvdvaivfdr pnvddrvtdl lwmvrvaplc
      181 spgtweqhrg ktleqflndt ellhvklene prsllwssya dqqrialdcr gglafdtafs
      241 avryaigasg vvladidmfa seisagnlvm pfeavaadgy gyylkmhaed ladpalflfr
      301 dwiirhfagg aahheargdm svpvelpsrl ag
//
LOCUS       WP_235982006             410 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Novosphingobium aerophilum].
ACCESSION   WP_235982006
VERSION     WP_235982006.1
KEYWORDS    RefSeq.
SOURCE      Novosphingobium aerophilum
  ORGANISM  Novosphingobium aerophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Novosphingobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Novosphingobium aerophilum"
                     /db_xref="taxon:2839843"
     Protein         1..410
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=43436
     Region          11..400
                     /region_name="Nuc_H_symport"
                     /note="Nucleoside H+ symporter; pfam03825"
                     /db_xref="CDD:461066"
ORIGIN      
        1 mstsqarrpr tialfvmmal qlaiwgawap klfpymgmlg ftpgqqalvg scwgiasvvg
       61 iffsnqfadr nfaaerflav shlvgglclf gaawattfpa ffgcylvysl vyvptlsvtn
      121 tiafanlsdg kdfgrvragg tvgwvmaswp fvfilgahsg pedvraiflv agaialalaa
      181 fsltlphtpp npagdgidal awrralgllr qpfvavlflv tfidsvvhng yfvmadaflt
      241 nrvgiagnls mvvlslgqia evvtmlvlgw vlgrlgwrvt mivgilghaa rflafaflad
      301 svpaivavql lhgicyafff atvyifvdea fpkdvrssaq glfnllilgi gnmvasalfp
      361 altagltgpd gqvdyhrlfl vpaglaaaga iilalafrpp navpatpena
//
LOCUS       WP_235982012             464 aa            linear   BCT 02-MAR-2025
DEFINITION  porin [Novosphingobium aerophilum].
ACCESSION   WP_235982012
VERSION     WP_235982012.1
KEYWORDS    RefSeq.
SOURCE      Novosphingobium aerophilum
  ORGANISM  Novosphingobium aerophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Novosphingobium.
REFERENCE   1  (residues 1 to 464)
  AUTHORS   Siehnel,R.J., Egli,C. and Hancock,R.E.
  TITLE     Polyphosphate-selective porin OprO of Pseudomonas aeruginosa:
            expression, purification and sequence
  JOURNAL   Mol Microbiol 6 (16), 2319-2326 (1992)
   PUBMED   1406271
REFERENCE   2  (residues 1 to 464)
  AUTHORS   Hancock,R.E., Egli,C., Benz,R. and Siehnel,R.J.
  TITLE     Overexpression in Escherichia coli and functional analysis of a
            novel PPi-selective porin, oprO, from Pseudomonas aeruginosa
  JOURNAL   J Bacteriol 174 (2), 471-476 (1992)
   PUBMED   1370289
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019042.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07396.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Novosphingobium aerophilum"
                     /db_xref="taxon:2839843"
     Protein         1..464
                     /product="porin"
                     /calculated_mol_wt=50531
     Region          121..464
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 maltslsspa laaedpatia slqrqidelr aqvqallaaq qnaqtpalpp tapapvapap
       61 aaapvlavvt ppaptaskpg kpkpwydrlq lrgytqmrvs evidgdtdap agvsrlrsvh
      121 dagvgekgnf nfrrirlalq gdvsdrmgly lqgefasavt gqangerren ffqlrdayad
      181 vyfadrtikl rvgqskvpfg wenlqsssnr iaidradgpn savpgerdig ivgfytppai
      241 qkiwddlakd gqklfgnyga falgvyngqg tnrtekndgl mkvamatvpf rldglggpfv
      301 gkvlelgaeg mlntfqpevr tggvsarayi dnrvnlhail ypapfgiqae wswgkgpewd
      361 rltqslaskp lsggyvqamy rvkhspigaf ipyarwqsyr ggwktatnap ristdeielg
      421 vewlplkefe vtmayarmrr seaderrsgv argdllraqi qwny
//
LOCUS       WP_235982092            1088 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Novosphingobium
            aerophilum].
ACCESSION   WP_235982092
VERSION     WP_235982092.1
KEYWORDS    RefSeq.
SOURCE      Novosphingobium aerophilum
  ORGANISM  Novosphingobium aerophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Novosphingobium.
REFERENCE   1  (residues 1 to 1088)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Novosphingobium aerophilum"
                     /db_xref="taxon:2839843"
     Protein         1..1088
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=116435
     Region          50..>256
                     /region_name="BtuB"
                     /note="Outer membrane cobalamin receptor protein BtuB
                     [Coenzyme transport and metabolism]; COG4206"
                     /db_xref="CDD:443355"
     Region          67..1087
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mklrrttllw acatagliap tlaatamaqe aapapatptk ateddriadi ivtgsrivrp
       61 nlrsaipiat vdreefikqg qtsigdtlnd lpqlrstfaq qnpgagvgia glnlldlrgl
      121 gtvrtlvlvn grrhvgadil nnavspdvnt iatdliervd ivtggnsavy gsdaiagvvn
      181 fvlrrnfdgi qirgnagvaq kgfggnqyvs gmvgknfadg rgnvilqgey srqqrvyasd
      241 ipwyrqangl vtvdadspdt pnatdgfads iyledirsst thrfglvaip qpnsaaagcg
      301 rgtlanngpa nnlgtayhcn fifnadgtlv pqtgtrvgtg pggtmlggng qtgregtlls
      361 ilpfnerysg nllarfefsp aveafieaky vrvkavgnql gptflnnstg slgndnridp
      421 rldnpflnaa arttitngil asgcgyalgt algtvtcral taaertaiad gsyrflfart
      481 ltdsedrder ftrdtfriva glrgqfnddw ryelsvnygk fnetadmrgf vnrqrfllsl
      541 dagrnpltga iecrakfdpa sarglsaytd saatlaadia acvpynpfgs tdnraavayf
      601 kqniinrawm dqfdvsgfvs gdtsgffklp ggpisfavgg eyraeraand sdpaadngis
      661 nsvflgdvsp ramivkegya eirvplladl pmireltlga sgrvsnynta vgtvytynyg
      721 geyapfkglr franvgrair apnaseslfp nvpnfangfi dpcntnaign nairstncns
      781 vlsaaqianl ppagysigii sgsnanlqqe tsdsltlgvv ftpefipgfs faadyykikv
      841 kntivtlsaq tivnscydsa nlssplcsvf krntgstagp lgelsgqilf nslvagpqnf
      901 akriregidf easyrralsd kvnlttkliy thqltnsnfe nptlpnfenr imselgdpqd
      961 ewrwdtnlsv gpvsfgytlr yigsmftsty eafnplpsac tvsgtttvcp plnadavdpk
     1021 rypgvfyhna riewnirtpe sgrdfnlyfg vdnlsnklpp lgttatgsgs aiyavrgrnf
     1081 yagfraki
//
LOCUS       WP_235982095             167 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Novosphingobium aerophilum].
ACCESSION   WP_235982095
VERSION     WP_235982095.1
KEYWORDS    RefSeq.
SOURCE      Novosphingobium aerophilum
  ORGANISM  Novosphingobium aerophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Novosphingobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024824.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13432.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Novosphingobium aerophilum"
                     /db_xref="taxon:2839843"
     Protein         1..167
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=16808
     Region          29..>120
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          33..61
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(34,37..38,41..42,44,68,71..72,75..76,78..79,102,
                     105..106,109..110,113)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          66..96
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          101..126
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mrfapagval slalalsasv ghsappqpld praaalvsqg raalaggnpn aaidafesal
       61 aiqpgatait ldlaeatrrq glqgkalhyy realerdpqn ltaisgegaa lvekgaieka
      121 krnltrlqgl cgdacpetre lagliakaga aqvvsaeaik psptvtn
//
LOCUS       WP_235982202             300 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar-binding domain-containing protein, partial [Novosphingobium
            aerophilum].
ACCESSION   WP_235982202
VERSION     WP_235982202.1
KEYWORDS    RefSeq.
SOURCE      Novosphingobium aerophilum
  ORGANISM  Novosphingobium aerophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Novosphingobium.
REFERENCE   1  (residues 1 to 300)
  AUTHORS   Jacobson,R.H., Zhang,X.J., DuBose,R.F. and Matthews,B.W.
  TITLE     Three-dimensional structure of beta-galactosidase from E. coli
  JOURNAL   Nature 369 (6483), 761-766 (1994)
   PUBMED   8008071
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014851.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02837.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Novosphingobium aerophilum"
                     /db_xref="taxon:2839843"
     Protein         1..>300
                     /product="sugar-binding domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          47..>296
                     /region_name="LacZ"
                     /note="Beta-galactosidase/beta-glucuronidase [Carbohydrate
                     transport and metabolism]; COG3250"
                     /db_xref="CDD:442481"
ORIGIN      
        1 mpsnraliml afttlgavtg isptlaktsa pdpaaradrp vqvlaegwrf rldpatagpe
       61 qpgfddsgwa pvavphswnr vgfyradtpg rlnrpetidk tmgvgwyrlt ftptgaftgk
      121 rlwlefdaas rlaevwlngv rlgshmggfs rfrfdataaf rpgqpnvlav rvdnskpapg
      181 aatadalpla gdffvhggly rpvrlvatda vhvdmldhgg sgiaatteai gpgravvrvt
      241 trlrndgaga tpvtvttrlv dhlgrtaata tttvplatag sgqaeqtlti arprlwagtv
//
LOCUS       WP_235982218             988 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 N-terminal domain-containing protein
            [Gelidibacter maritimus].
ACCESSION   WP_235982218
VERSION     WP_235982218.1
KEYWORDS    RefSeq.
SOURCE      Gelidibacter maritimus
  ORGANISM  Gelidibacter maritimus
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Gelidibacter.
REFERENCE   1  (residues 1 to 988)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00933.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Gelidibacter maritimus"
                     /db_xref="taxon:2761487"
     Protein         1..988
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=111371
     Region          49..>416
                     /region_name="BglX"
                     /note="Periplasmic beta-glucosidase and related
                     glycosidases [Carbohydrate transport and metabolism];
                     COG1472"
                     /db_xref="CDD:441081"
     Region          588..982
                     /region_name="AmpC"
                     /note="CubicO group peptidase, beta-lactamase class C
                     family [Defense mechanisms]; COG1680"
                     /db_xref="CDD:441286"
ORIGIN      
        1 mtkrtasivl mlgllfsvkt lmaqqnsiek ppflkyensa wvdsimkkls pderiaqlim
       61 vaaysnrtee hkqeilklin eqkiggliff qgdpesqvkl mndyqeaskv pllgaidaew
      121 glgmrldnti nypfqmalga iadntllydm gvevarqikr tglhvnfapv vdvnnnpnnp
      181 vinfrsfged kfnvtdksva ymkgmqdnnv mttakhfpgh gdtdtdshfd lpqinhsler
      241 ldtlelfpfr klidagiggi mvahlnipal dstgipstls kpiitdllkn kmgfeglivt
      301 damnmkaitk tyspgivdkd ailagndlle ftenvprais eikkaiqqgl isqeeidrrv
      361 rrvlaikqwv gldnyipmat eqiltdlntp eanllnrklv aasltvlnnk nnmlpfheld
      421 rvkfasisig sdnetpfqks lklytkvndf qlplkatqaq vlelkknled fdyiitgihd
      481 tsrfprnrle lstsveefvn elsekkntvi tffknpyvln klehiekapg livayqdskn
      541 tqeltaqlif ggigasgklp vsiggkfqag dglqikgglr lsytlpeaag mdskvlvngi
      601 dslmhqamqm kaipggqvlv akdqkvvfyk ayglqsyndt ikvkkddlyd lasvtkissa
      661 maalmklyde gkfdldgtla dylpkfknsn kadisfrdil thqarfrawi pfykemyrkn
      721 gsykwwtvkk dssaryptki sdnmflhrny sdkiakkirk spllekkayv ysdfffilap
      781 rvvesmvdld fdtylqnnfy qplggntity kplnkfplee ivptendyyf rhlpihgtvh
      841 detaimlggv sghaglfana ndlaklmqmy lnmgeyggkr yieeetlrnf sktqfpdsdn
      901 kralgfdkrr pnknsivnnt apdaselsfg htgftgtmvw mdpeadllyi flsnrvsptr
      961 dnhrlyqlnt rtqiqqvlyd aiktasek
//
LOCUS       WP_235982226             398 aa            linear   BCT 02-MAR-2025
DEFINITION  efflux RND transporter permease subunit [Novosphingobium
            aerophilum].
ACCESSION   WP_235982226
VERSION     WP_235982226.1
KEYWORDS    RefSeq.
SOURCE      Novosphingobium aerophilum
  ORGANISM  Novosphingobium aerophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Novosphingobium.
REFERENCE   1  (residues 1 to 398)
  AUTHORS   Murakami,S., Nakashima,R., Yamashita,E. and Yamaguchi,A.
  TITLE     Crystal structure of bacterial multidrug efflux transporter AcrB
  JOURNAL   Nature 419 (6907), 587-593 (2002)
   PUBMED   12374972
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00873.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Novosphingobium aerophilum"
                     /db_xref="taxon:2839843"
     Protein         1..398
                     /product="efflux RND transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=42332
     Region          <1..376
                     /region_name="AcrB"
                     /note="Multidrug efflux pump subunit AcrB [Defense
                     mechanisms]; COG0841"
                     /db_xref="CDD:440603"
ORIGIN      
        1 mraipearfy nqgnfgqapv tvvlagadsa alertqmrml remralpavs dprpspsapg
       61 pelvvtprpd eaarlnvdtr tiasvlrvat igdidasvak ysdgeqrlpi rvrlpetirr
      121 dldaianlrv ptkdgrttpl ssvasvefka gpgrivrfgr errvaveadl avgvpvgtal
      181 aavrdlsvmk qlpkgiheaq egqsqmigem fvgfilalla gisltfsvlv llfrsffkpv
      241 vimgalplsl vgafgalkla glpldlpvli gllmlmglca knsillvefa iesereglsm
      301 rdalyaacae rtrpiimtsv amiagmlpta lglgegsesr qpmaiavvgg ivsstalslv
      361 lvpafyelve aiekritpyl arlvrspdpd aepearpa
//
LOCUS       WP_235982233             267 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Novosphingobium aerophilum].
ACCESSION   WP_235982233
VERSION     WP_235982233.1
KEYWORDS    RefSeq.
SOURCE      Novosphingobium aerophilum
  ORGANISM  Novosphingobium aerophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Novosphingobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Novosphingobium aerophilum"
                     /db_xref="taxon:2839843"
     Protein         1..267
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=28646
     Region          10..263
                     /region_name="PRK09134"
                     /note="SDR family oxidoreductase"
                     /db_xref="CDD:236389"
ORIGIN      
        1 mpsaasesvq grpdridrpa mlvtggaqri galiarrfaa dgwhvvihcg rsrhaadala
       61 avlpsaevtq cdltdqeaav amvrdlaarl pdwrvlvnca avfrfdsdea peagvldeai
      121 avnaatpaam tavflsramt ergrvvidvl dqklrninpd ffsytmakaa feaamrmqam
      181 hcprpadrvy glapgammas fdqapdehll sgrmnllgrl ndphelaeaa lflsagllas
      241 gttlyidsgq hlmrqprdvl flardpg
//
LOCUS       WP_235982263             309 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Novosphingobium aerophilum].
ACCESSION   WP_235982263
VERSION     WP_235982263.1
KEYWORDS    RefSeq.
SOURCE      Novosphingobium aerophilum
  ORGANISM  Novosphingobium aerophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Novosphingobium.
REFERENCE   1  (residues 1 to 309)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 309)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Novosphingobium aerophilum"
                     /db_xref="taxon:2839843"
     Protein         1..309
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=33354
     Region          17..74
                     /region_name="Phage_int_SAM_1"
                     /note="Phage integrase, N-terminal SAM-like domain;
                     cl12235"
                     /db_xref="CDD:472283"
     Region          122..306
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(138,152..153,236,238,258,293)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:271180"
     Site            order(152,258,261,284,293)
                     /site_type="active"
                     /db_xref="CDD:271180"
ORIGIN      
        1 mgeeiaaars yraqakaant iraytsdwnq fegwcdersl eplparveav atylaslama
       61 gkadstigrh laaigwkhrq dglvaptvrd dkmviadtla girreqrtrp sakktaitak
      121 dltamiaaad gegtrsirdr avlalglaaa lrrselvale shdvelvdkg lklmlrhskt
      181 dqdgegqvia vpsgkalrpv erlkawlavr gggagplfyr idpqgrltdk pmsdrsiarl
      241 iqkyagrvgl dpetvaghsl ragflteasr sgatiakmqe vsrhkkvevl lgyvraaelf
      301 dehagaefl
//
LOCUS       WP_235982373              88 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma factor-like helix-turn-helix DNA-binding protein
            [Gelidibacter maritimus].
ACCESSION   WP_235982373
VERSION     WP_235982373.1
KEYWORDS    RefSeq.
SOURCE      Gelidibacter maritimus
  ORGANISM  Gelidibacter maritimus
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Gelidibacter.
REFERENCE   1  (residues 1 to 88)
  AUTHORS   Campbell,E.A., Muzzin,O., Chlenov,M., Sun,J.L., Olson,C.A.,
            Weinman,O., Trester-Zedlitz,M.L. and Darst,S.A.
  TITLE     Structure of the bacterial RNA polymerase promoter specificity
            sigma subunit
  JOURNAL   Mol Cell 9 (3), 527-539 (2002)
   PUBMED   11931761
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019886.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08281.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Gelidibacter maritimus"
                     /db_xref="taxon:2761487"
     Protein         1..88
                     /product="sigma factor-like helix-turn-helix DNA-binding
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0016987 - sigma factor activity [Evidence
                     IEA]"
                     /GO_process="GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=9962
     Region          <6..74
                     /region_name="Sig70_bacteroi1"
                     /note="RNA polymerase sigma-70 factor, Bacteroides
                     expansion family 1; TIGR02985"
                     /db_xref="CDD:274376"
ORIGIN      
        1 mshfveyedd ndlerlitiv kneiqnlppk ckktfllske egltnieiae flnvsvksve
       61 ahitkafsil rskigsrtda ilfllfht
//
LOCUS       WP_235982474             349 aa            linear   BCT 02-MAR-2025
DEFINITION  1-acyl-sn-glycerol-3-phosphate acyltransferase [Gelidibacter
            maritimus].
ACCESSION   WP_235982474
VERSION     WP_235982474.1
KEYWORDS    RefSeq.
SOURCE      Gelidibacter maritimus
  ORGANISM  Gelidibacter maritimus
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Gelidibacter.
REFERENCE   1  (residues 1 to 349)
  AUTHORS   Neuwald,A.F.
  TITLE     Barth syndrome may be due to an acyltransferase deficiency
  JOURNAL   Curr Biol 7 (8), R465-R466 (1997)
   PUBMED   9259571
REFERENCE   2  (residues 1 to 349)
  AUTHORS   Bione,S., D'Adamo,P., Maestrini,E., Gedeon,A.K., Bolhuis,P.A. and
            Toniolo,D.
  TITLE     A novel X-linked gene, G4.5. is responsible for Barth syndrome
  JOURNAL   Nat Genet 12 (4), 385-389 (1996)
   PUBMED   8630491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013702.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01553.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Gelidibacter maritimus"
                     /db_xref="taxon:2761487"
     Protein         1..349
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /GO_function="GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=39739
     Region          15..198
                     /region_name="LPLAT"
                     /note="Lysophospholipid acyltransferases (LPLATs) of
                     glycerophospholipid biosynthesis; cl17185"
                     /db_xref="CDD:473073"
     Site            order(50,53,56,72..75,130..132)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153254"
ORIGIN      
        1 mkengklkll wlhsmraylr lalffyykki echyeqplps nqptlflgnh qnglmdplli
       61 atkkgqfsyf ltrasvfqkq wvstflksll mlpvyrvrdg wdslsnnrai fktcsallyk
      121 nnaivlfpeg nhnikrqvrp lskgftriia etlsehpdik inlvpvgfny eqaeafadhv
      181 vlnfgtplsv kpyekpdsha svlrlkkdvy naltkltthi egedydtvln klndlnadfl
      241 npkavnqcaa sdfkdceiks ekkqnpikai akmglctalf lpylvwklil epkikepefi
      301 atfrfatvis lvplfmivma aflwlnfgia ygllylasvl vldliavkl
//
LOCUS       WP_235982513             329 aa            linear   BCT 02-MAR-2025
DEFINITION  endonuclease/exonuclease/phosphatase family protein [Sphingomonas
            albertensis].
ACCESSION   WP_235982513
VERSION     WP_235982513.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas albertensis
  ORGANISM  Sphingomonas albertensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 329)
  AUTHORS   Dlakic,M.
  TITLE     Functionally unrelated signalling proteins contain a fold similar
            to Mg2+-dependent endonucleases
  JOURNAL   Trends Biochem Sci 25 (6), 272-273 (2000)
   PUBMED   10838565
REFERENCE   2  (residues 1 to 329)
  AUTHORS   Mol,C.D., Kuo,C.F., Thayer,M.M., Cunningham,R.P. and Tainer,J.A.
  TITLE     Structure and function of the multifunctional DNA-repair enzyme
            exonuclease III
  JOURNAL   Nature 374 (6520), 381-386 (1995)
   PUBMED   7885481
REFERENCE   3  (residues 1 to 329)
  AUTHORS   Lahm,A. and Suck,D.
  TITLE     DNase I-induced DNA conformation. 2 A structure of a DNase
            I-octamer complex
  JOURNAL   J Mol Biol 222 (3), 645-667 (1991)
   PUBMED   1748997
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015338.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03372.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Sphingomonas albertensis"
                     /db_xref="taxon:2762591"
     Protein         1..329
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=35748
     Region          14..>255
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 mslsadgara sttfdvltfn ieglgwpara krgpalarit aalrqmeaqg dapdivmvqe
       61 mfskaavrav tgigypnmvf gpsrtqrksl pgadrmggpy rwkkgelglh mvgsglails
      121 rypivetrse pfgrrrcagl dclgnkgvly arvaipgvpg ainlfnthln sqrssrvspr
      181 rharahrlqv delgafisvv gdqnvptilg gdfnmkdsai rferfrnvte pfeivqewct
      241 anplpcdtri swdgdepwmd tqdlqlfesg stvtvtpirv eavfdgsags prlsdhdgfr
      301 vtyrvswpar arsrmgsaea lpscggrag
//
LOCUS       WP_235982537             636 aa            linear   BCT 02-MAR-2025
DEFINITION  NPCBM/NEW2 domain-containing protein [Sphingomonas albertensis].
ACCESSION   WP_235982537
VERSION     WP_235982537.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas albertensis
  ORGANISM  Sphingomonas albertensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 636)
  AUTHORS   Kaur,G., Iyer,L.M., Burroughs,A.M. and Aravind,L.
  TITLE     Bacterial death and TRADD-N domains help define novel apoptosis and
            immunity mechanisms shared by prokaryotes and metazoans
  JOURNAL   Elife 10, e70394 (2021)
   PUBMED   34061031
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 636)
  AUTHORS   Rigden,D.J.
  TITLE     Analysis of glycoside hydrolase family 98: catalytic machinery,
            mechanism and a novel putative carbohydrate binding module
  JOURNAL   FEBS Lett 579 (25), 5466-5472 (2005)
   PUBMED   16212961
REFERENCE   3  (residues 1 to 636)
  AUTHORS   Naumov,D.G.
  TITLE     [Phylogenetic analysis of alpha-galactosidases of the GH27 family]
  JOURNAL   Mol Biol (Mosk) 38 (3), 463-476 (2004)
   PUBMED   15285616
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019908.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08305.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Sphingomonas albertensis"
                     /db_xref="taxon:2762591"
     Protein         1..636
                     /product="NPCBM/NEW2 domain-containing protein"
                     /calculated_mol_wt=68190
     Region          46..368
                     /region_name="GH27"
                     /note="glycosyl hydrolase family 27 (GH27); cd14792"
                     /db_xref="CDD:269893"
     Site            order(53,88..89,137,189,191,255,274,278)
                     /site_type="active"
                     /db_xref="CDD:269893"
     Region          380..454
                     /region_name="Melibiase_C"
                     /note="Alpha galactosidase C-terminal beta sandwich
                     domain; pfam17801"
                     /db_xref="CDD:465512"
     Region          511..634
                     /region_name="NPCBM"
                     /note="NPCBM/NEW2 domain; pfam08305"
                     /db_xref="CDD:429907"
ORIGIN      
        1 mpsmmmigva laalcgplaa ataaaadpmt ptgkwsantd gsapvppmgw nswnafnsdv
       61 deekvlasaq alvdtklrdi gyryvniddg wwlkrrqpdg rllirtshfp saatgadtsf
      121 rpltdrlham glkagiysdi grnscgqiyt pdfknqpegs vaerevglyg hvdqdirlff
      181 aewnfdfikv dgcgarglpa daprvksgly raltplvdmq slggsdvagi rglyeqvhta
      241 lhthagdrpy vyslclwgag dvrawgkdvg ntsrtsddiq pvwprmltnl dtvthralya
      301 hpgswndpdm lfvgtgdfda ahltearshf slwamvdspl iigydlrklt pdllaifgna
      361 divalnqdpa gnqavlayds gevqtfvktl adgskgvalf nrtaspakav ltaeqlkmlp
      421 tadvrlkdlw tkkdqsfrke vavtlaphet lifratgtrr lpgglylseq tgrvnpaadg
      481 vvvpqpdpti yqsitpwtgt rgggehpqyg gwggaeadra pygkllrvag tdfdtgigvl
      541 ansrlevrnq gyarfaanvg indsgqprsg ttvfevwgdg rllaksrpmg fgeaaaplea
      601 rvagvrivel vargsgaaan agtpqpaiwa daalyt
//
LOCUS       WP_235982540             545 aa            linear   BCT 02-MAR-2025
DEFINITION  alginate export family protein [Sphingomonas albertensis].
ACCESSION   WP_235982540
VERSION     WP_235982540.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas albertensis
  ORGANISM  Sphingomonas albertensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 545)
  AUTHORS   Whitney,J.C., Hay,I.D., Li,C., Eckford,P.D., Robinson,H.,
            Amaya,M.F., Wood,L.F., Ohman,D.E., Bear,C.E., Rehm,B.H. and
            Howell,P.L.
  TITLE     Structural basis for alginate secretion across the bacterial outer
            membrane
  JOURNAL   Proc Natl Acad Sci U S A 108 (32), 13083-13088 (2011)
   PUBMED   21778407
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024765.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13372.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Sphingomonas albertensis"
                     /db_xref="taxon:2762591"
     Protein         1..545
                     /product="alginate export family protein"
                     /calculated_mol_wt=58546
     Region          145..537
                     /region_name="Alginate_exp"
                     /note="Alginate export; cl16257"
                     /db_xref="CDD:472886"
ORIGIN      
        1 mirpsiggal calassllas tamaqtaiaq aagvqtapat dpvaaepaad pvplsdgvsa
       61 gapataprql rarrnpvskd qsasaasspi aesypnaaig dgttaggynq srwaedwskl
      121 rdpakrkdiv dqlkfipiaa dgevyltlsg earlrvnqtt npnlrdaeaq rqdilrlfgg
      181 adlhvgehfr fygelahgtl egqnlgtalp nlrnklavqq afvdvtgtva dvdlgvrygr
      241 qtfadgpnll vvprdnntly fgfngfrawa rtagvradvf dfkptaygng gtqddnaesd
      301 rrftgistgv vvpeslfggs klyvdpflwr lrdrsatwgt gtarevrnfy glhiwgdagp
      361 vnldwtinyq ggsydnrsik awlllagqty rlgkgknapr vgfhadyasg ggaygtgtlr
      421 nslapfgnni yysyqlfatp tnliavapnf sfttlgklrl taeyqlswrd ttsdavyran
      481 gsafagtqnf ggkkiadtir fqavypissr lsftgryehl iagpaltnag yknsdflagw
      541 isyrf
//
LOCUS       WP_235982696             475 aa            linear   BCT 02-MAR-2025
DEFINITION  S41 family peptidase [Sphingomonas albertensis].
ACCESSION   WP_235982696
VERSION     WP_235982696.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas albertensis
  ORGANISM  Sphingomonas albertensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015531.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03572.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Sphingomonas albertensis"
                     /db_xref="taxon:2762591"
     Protein         1..475
                     /product="S41 family peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=49979
     Region          49..100
                     /region_name="Pept_S41_N"
                     /note="Peptidase S41 N-terminal domain; pfam18294"
                     /db_xref="CDD:436392"
     Region          214..422
                     /region_name="Peptidase_S41_CPP_like"
                     /note="C-terminal processing peptidase-like; serine
                     protease family S41; cd07561"
                     /db_xref="CDD:143477"
     Site            order(336,363)
                     /site_type="active"
                     /note="Catalytic dyad [active]"
                     /db_xref="CDD:143477"
ORIGIN      
        1 mrrafggmla mavmlsgcgg sdegtistgg stpapaptas tgcslrerqd waaaqirewy
       61 lfpdtlpatl stasyttvdd yidaltatar aqrkdrffty ltsikeenay ynagssagfg
      121 irfaldqsgq rlfsaesfeg apglaagidr gteilaigtt satlrtvsai vaaegtaglt
      181 talgpdtagt arvmqindaa gtrtvtvtkt dfsllpvssr ygakiiqdgg qsvgyinlrt
      241 fiktaepalk tafadfrakg vtkviidlry nggglietae ylgdllgaar stsevfdyvt
      301 frtekasnnt trffapqpes iaptriafig tggtasasel vinaftpylh tnagligtnt
      361 ygkpvgqial dreacddrlr vvalatqnaa rsgdyydgla tkveascqas ddigyqlgdp
      421 lesstrqaln flagrsctpi tgaanarslr tadtrrdllm sdrpgtaqre vpglf
//
LOCUS       WP_235982701             449 aa            linear   BCT 02-MAR-2025
DEFINITION  lanthionine synthetase LanC family protein [Sphingomonas
            albertensis].
ACCESSION   WP_235982701
VERSION     WP_235982701.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas albertensis
  ORGANISM  Sphingomonas albertensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 449)
  AUTHORS   Xie,L., Chatterjee,C., Balsara,R., Okeley,N.M. and van der
            Donk,W.A.
  TITLE     Heterologous expression and purification of SpaB involved in
            subtilin biosynthesis
  JOURNAL   Biochem Biophys Res Commun 295 (4), 952-957 (2002)
   PUBMED   12127987
REFERENCE   2  (residues 1 to 449)
  AUTHORS   Mayer,H., Bauer,H., Breuss,J., Ziegler,S. and Prohaska,R.
  TITLE     Characterization of rat LANCL1, a novel member of the lanthionine
            synthetase C-like protein family, highly expressed in testis and
            brain
  JOURNAL   Gene 269 (1-2), 73-80 (2001)
   PUBMED   11376939
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05147.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Sphingomonas albertensis"
                     /db_xref="taxon:2762591"
     Protein         1..449
                     /product="lanthionine synthetase LanC family protein"
                     /GO_process="GO:0031179 - peptide modification [Evidence
                     IEA]"
                     /calculated_mol_wt=46425
     Region          <27..428
                     /region_name="LanC_like"
                     /note="Cyclases involved in the biosynthesis of
                     lantibiotics, and similar proteins; cl04955"
                     /db_xref="CDD:471159"
ORIGIN      
        1 mnplylataf digtklarda vwhdarcnwf gpvhedftgt qvlgcgtmgp tlydgtagig
       61 lflarlhrat gdplaartat gaiahaldra adipdalhrg fytgflgigy aamqagsald
      121 redlvaqgla mvhravalsp egrvaidvms gnagaipvll algaahdaps lteaaivagd
      181 rlldgaetsd rglswnamge maelvdlsgl sddlvadfra qrrpnltgls hgaggvgwal
      241 lelaavtedd rfaaagraaf ayedswfdaa sdqwpdlrsh dagkplgaap aawchgavgi
      301 glarirafdl tgdatmrlai esalritars vigqlarssc nyslchgaag daelflswtt
      361 asgdaearti vdeiarhgvd tygatgrpwp sgtpgagesp slmlglagtg hfylrafdpa
      421 atpsvlllap ssanptvnrs ptrspefag
//
LOCUS       WP_235982711             403 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme [Kordia
            aestuariivivens].
ACCESSION   WP_235982711
VERSION     WP_235982711.1
KEYWORDS    RefSeq.
SOURCE      Kordia aestuariivivens
  ORGANISM  Kordia aestuariivivens
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Kordia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Kordia aestuariivivens"
                     /db_xref="taxon:2759037"
     Protein         1..403
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /calculated_mol_wt=45508
     Region          82..403
                     /region_name="CsdA"
                     /note="Selenocysteine lyase/Cysteine desulfurase [Amino
                     acid transport and metabolism]; COG0520"
                     /db_xref="CDD:440286"
ORIGIN      
        1 meekesrlli vscnfdstml esqkdkfklp eevtylngay mspslksvel aghqavsqkc
       61 lpfeikpvdf ftdtkklkal faelvtvpdp qniavipsvs ygiatvakni plekgdeili
      121 vgeqfpsnvy swqriadqne akisivsapt qdfvdrgknw naqilasihe ktkvvamphi
      181 hwsdgtlfdl kairkktkey nalliidgtq sigalpfsve eiqpdalica gykwllgpya
      241 iglayysdel ckgipieenw inrkqsedft nlvsyenkyq pkagrfnvge msnftltpml
      301 ikaiaqllew kpmhiqeyca eisrnaiael kelgcfiedv nyrsshlfgi ylpegiatee
      361 fknklieeni yvsfrgnavr vsshvyntqk dfeklvhcfk sli
//
LOCUS       WP_235982789             881 aa            linear   BCT 02-MAR-2025
DEFINITION  inorganic phosphate transporter [Kordia aestuariivivens].
ACCESSION   WP_235982789
VERSION     WP_235982789.1
KEYWORDS    RefSeq.
SOURCE      Kordia aestuariivivens
  ORGANISM  Kordia aestuariivivens
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Kordia.
REFERENCE   1  (residues 1 to 881)
  AUTHORS   Versaw,W.K. and Metzenberg,R.L.
  TITLE     Repressible cation-phosphate symporters in Neurospora crassa
  JOURNAL   Proc Natl Acad Sci U S A 92 (9), 3884-3887 (1995)
   PUBMED   7732001
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013543.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01384.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Kordia aestuariivivens"
                     /db_xref="taxon:2759037"
     Protein         1..881
                     /product="inorganic phosphate transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0006817 - phosphate ion transport
                     [Evidence IEA]"
                     /calculated_mol_wt=96932
     Region          4..>211
                     /region_name="PitA"
                     /note="Phosphate/sulfate permease [Inorganic ion transport
                     and metabolism]; COG0306"
                     /db_xref="CDD:440075"
     Region          <575..790
                     /region_name="CagA_N"
                     /note="CagA protein; pfam18971"
                     /db_xref="CDD:408741"
     Region          <805..>881
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
ORIGIN      
        1 meniyfymii alailavadl vvgvsndavn flnsaigska isfrtlmiva sigvtigavf
       61 ssglmevark gifnpgefmf eeimiifmav mitdillldf fnsiglptst tvsivfellg
      121 asvamaliki gatdgesfss ltkyinteta twiifgiils vfvaftvgav vqwvsrlils
      181 ynfeqkakwv galfggialt aityfifmkg ikgtnyaksi vdvlytgsad gllawgneyf
      241 gasyetvkel akenknfikv dtnagsasit lrgfleiyvl pivglslvfw sllsyvltnf
      301 fktniyklii vvgtfalala fagndlvnfi gpstgayqay ldfidptvnt lglsadnfpm
      361 dslgkkvttp tfllvaagli mvvtlwfstk aknvvktsld lssqgetker fqpnflsrgf
      421 vrmalamskm tsyilpeswq akiekqfetp vitltkdkty empafdmvra avnlmvaavl
      481 isfatslglp lsttyvtfmv amgtsladra wgaesavyrv agvlnviggw fftalsafta
      541 aglvayllnl nlkvmfpill vvaigllvrs tivynkkske skaedhlnka esssvqgvih
      601 esadnianvv krgnriytna inglakqdla mlkknkkniv klsteidelr dnifyfiknl
      661 desslgasdf yinilgylqd mtqsleyisk vshkhvnnnh kklkfnqike lkqvdealed
      721 lfnktkiafd srsfeqigdi lnnkkqvfdl vsqkiqvqva rtrteesspk nttlyfslll
      781 etkdllnatm nlleeyhnah datvkpatia veedtttqev lkektkevkt tevekpvsdt
      841 peaktkevkt tevekpisdt peakptkesk pdadeasske e
//
LOCUS       WP_235982831             562 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-L-fucosidase [Sphingomonas albertensis].
ACCESSION   WP_235982831
VERSION     WP_235982831.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas albertensis
  ORGANISM  Sphingomonas albertensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013300.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01120.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Sphingomonas albertensis"
                     /db_xref="taxon:2762591"
     Protein         1..562
                     /product="alpha-L-fucosidase"
                     /GO_function="GO:0004560 - alpha-L-fucosidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=62855
     Region          38..495
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
     Region          470..536
                     /region_name="Fucosidase_C"
                     /note="Alpha-L-fucosidase C-terminal domain; pfam16757"
                     /db_xref="CDD:465259"
ORIGIN      
        1 mmtfsrrdam gvigfagaas tlsaaqvmaa tapsvqggqf tpdwaaltsg yrapnwfrda
       61 kfgiwahwsa qcvpeegdwy ardmylqgtr aytahvakyg hpskvgfmei enlwkaerwd
      121 perlidlyqr agakyfvala nhhdnldtya sthhawnttr vgpkkdivgi wakvarakgl
      181 rfgvsnhsah awhwyqpayg ydpegpmrgq rydawrlsaa dgkgkwwdgl dpqelysgrt
      241 mplpsgvatl aeanaihert drlwsegipk dnpefvrtwa lrcrelidny rpdllyfdnf
      301 dlpfqqvgle taahyynanr awnngrleav lnvkmvpper rmglvedver ggkpyietyp
      361 wqtdtclgnw hydralydrd gyktaatvlh tlfdvvskng nlllsvpmrg dgtidekeer
      421 vieeiatwmg rygtaiyatr pwrihaegpt kpasgmfaeg gpkspytand iryvrngddv
      481 halvmgwped giarltlwsv gnpigrgeir rvtlpgqttp lafrrtgaal evtlppghrn
      541 aigiplilsg rgltggslae ta
//
LOCUS       WP_235982867             433 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Sphingomonas albertensis].
ACCESSION   WP_235982867
VERSION     WP_235982867.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas albertensis
  ORGANISM  Sphingomonas albertensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Sphingomonas albertensis"
                     /db_xref="taxon:2762591"
     Protein         1..433
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=46919
     Region          11..423
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(21..22,25..26,29,61,116..117,119..121,124,144,
                     147..148,151,247,250..251,254..256,259,299,302,351..352,
                     356,360,376,379..380,383..384,387)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mtkprlslvr liemnlgflg lqfsfglqqa nmapiygylg adeaslpllw lagpmtglli
       61 qpligamsdr tstrigrrtp yfligavlcs lcllampysp tlwvaasllw vldaannvtm
      121 epyrayvgdr lpddqraagf ltqsaftgla qtlsylapsl lvwigfnkda vdgngipdit
      181 riafligavl slativwsvv rvpelplpae eqarlakepl tlsgtlrdlk talvemprpm
      241 rqlalamlcq wyamfaywqf itfavarslh gtsdakseaf rdtvltvgql gafynavafv
      301 aaialvplar rwgaksahaa cllasgvaml aipglrtepa lfvamlgigi gwasmmgnpy
      361 imlidmippe rngvymgifn mfivipmiie sltvplfyhs llggeprnil ylggalmvlg
      421 aiattrvtmp srr
//
LOCUS       WP_235982898             331 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Sphingomonas albertensis].
ACCESSION   WP_235982898
VERSION     WP_235982898.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas albertensis
  ORGANISM  Sphingomonas albertensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12697.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Sphingomonas albertensis"
                     /db_xref="taxon:2762591"
     Protein         1..331
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=34901
     Region          <42..318
                     /region_name="PhaC"
                     /note="Poly-beta-hydroxybutyrate synthase [Lipid transport
                     and metabolism]; COG3243"
                     /db_xref="CDD:442475"
ORIGIN      
        1 mflsvlrset aaspermara laglrayqga prekrpdpmp avhragrvsl rdygcggrpv
       61 vfvpslinpp dildhspess llrwiaaqgf hawlvdwgsp gsadrdldla ahverllvpl
      121 lraldeppvl vgyclggtla lgaaaitpva gvatiaapwh fagygegrsa laatwaavqp
      181 aaamlgvlpm evlqagfwql dpartiakye tfadvppdsd qsrafvrled wanagaplpy
      241 aaaaslfedc iandlpgkgr wviagtvvap lalacpkvef vslsdrivpa ataigladrr
      301 dlgaghvgmi vgrsarprlw eplvnwiagl a
//
LOCUS       WP_235982901             128 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4174 domain-containing protein [Kordia aestuariivivens].
ACCESSION   WP_235982901
VERSION     WP_235982901.1
KEYWORDS    RefSeq.
SOURCE      Kordia aestuariivivens
  ORGANISM  Kordia aestuariivivens
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Kordia.
REFERENCE   1  (residues 1 to 128)
  AUTHORS   Miljkovic-Licina,M., Hammel,P., Garrido-Urbani,S., Bradfield,P.F.,
            Szepetowski,P. and Imhof,B.A.
  TITLE     Sushi repeat protein X-linked 2, a novel mediator of angiogenesis
  JOURNAL   FASEB J 23 (12), 4105-4116 (2009)
   PUBMED   19667118
REFERENCE   2  (residues 1 to 128)
  AUTHORS   Royer-Zemmour,B., Ponsole-Lenfant,M., Gara,H., Roll,P., Leveque,C.,
            Massacrier,A., Ferracci,G., Cillario,J., Robaglia-Schlupp,A.,
            Vincentelli,R., Cau,P. and Szepetowski,P.
  TITLE     Epileptic and developmental disorders of the speech cortex:
            ligand/receptor interaction of wild-type and mutant SRPX2 with the
            plasminogen activator receptor uPAR
  JOURNAL   Hum Mol Genet 17 (23), 3617-3630 (2008)
   PUBMED   18718938
REFERENCE   3  (residues 1 to 128)
  AUTHORS   Bommer,G.T., Jager,C., Durr,E.M., Baehs,S., Eichhorst,S.T.,
            Brabletz,T., Hu,G., Frohlich,T., Arnold,G., Kress,D.C., Goke,B.,
            Fearon,E.R. and Kolligs,F.T.
  TITLE     DRO1, a gene down-regulated by oncogenes, mediates growth
            inhibition in colon and pancreatic cancer cells
  JOURNAL   J Biol Chem 280 (9), 7962-7975 (2005)
   PUBMED   15563452
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025151.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13778.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Kordia aestuariivivens"
                     /db_xref="taxon:2759037"
     Protein         1..128
                     /product="DUF4174 domain-containing protein"
                     /calculated_mol_wt=14984
     Region          5..124
                     /region_name="DUF4174"
                     /note="Domain of unknown function (DUF4174); pfam13778"
                     /db_xref="CDD:463980"
ORIGIN      
        1 mnaqdlkkhq wenriiiika tdiaskkqqq qlkefrdase emidrrfvvy vitrddfrli
       61 nyknsalnts gkiseklkns lnpkedfevf ligldsgikl qqtevltkid lfkivdsmpm
      121 rrnelrkn
//
LOCUS       WP_235983079             189 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4364 family protein [Gemmiger gallinarum].
ACCESSION   WP_235983079
VERSION     WP_235983079.1
KEYWORDS    RefSeq.
SOURCE      Gemmiger gallinarum
  ORGANISM  Gemmiger gallinarum
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Gemmiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025635.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14277.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Gemmiger gallinarum"
                     /db_xref="taxon:2779354"
     Protein         1..189
                     /product="DUF4364 family protein"
                     /calculated_mol_wt=20876
     Region          20..175
                     /region_name="DUF4364"
                     /note="Domain of unknown function (DUF4364); pfam14277"
                     /db_xref="CDD:464122"
ORIGIN      
        1 maeaftagvk pggltsdtei rillcylvkt aapltrdamq gallqeqlvn yfefvnalde
       61 ledqqliest ekgyvitekg avvastlayd lprsvresav raviriqswv hkaaqnkari
      121 qrdgdeyrvi ctiedmgrds fqiqlsmpdr ltaemvknrf iskgslvysq llnlltqpal
      181 ddappdavl
//
LOCUS       WP_235983100             253 aa            linear   BCT 02-MAR-2025
DEFINITION  4Fe-4S binding protein [Gemmiger gallinarum].
ACCESSION   WP_235983100
VERSION     WP_235983100.1
KEYWORDS    RefSeq.
SOURCE      Gemmiger gallinarum
  ORGANISM  Gemmiger gallinarum
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Gemmiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012267.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00037.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Gemmiger gallinarum"
                     /db_xref="taxon:2779354"
     Protein         1..253
                     /product="4Fe-4S binding protein"
                     /calculated_mol_wt=26277
     Region          5..145
                     /region_name="FldA"
                     /note="Flavodoxin [Energy production and conversion];
                     COG0716"
                     /db_xref="CDD:440480"
     Region          176..224
                     /region_name="DsrA"
                     /note="Dissimilatory sulfite reductase (desulfoviridin),
                     alpha and beta subunits [Inorganic ion transport and
                     metabolism]; COG2221"
                     /db_xref="CDD:441823"
ORIGIN      
        1 mfehavlydf sptggtrrtg eafcraiaas vtvvglcape mpaqpedtdi avlaapvfgg
       61 rlpgiaarrl aalkghglpa vtlavygtra fedallelnd iaaadgfqvi asgaciaqhs
      121 ivpelgpgrp daddlaeiaa faarvldkag rgdttapqvp gnrpykqgma sltapitleg
      181 ctrcgrcaav cptkaitvta egvrtredlc amcmactaac pshvrvlppe vqqktaqklh
      241 plcslrrpna fyl
//
LOCUS       WP_235983101             156 aa            linear   BCT 02-MAR-2025
DEFINITION  lactate racemase domain-containing protein [Gemmiger gallinarum].
ACCESSION   WP_235983101
VERSION     WP_235983101.1
KEYWORDS    RefSeq.
SOURCE      Gemmiger gallinarum
  ORGANISM  Gemmiger gallinarum
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Gemmiger.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Desguin,B., Goffin,P., Viaene,E., Kleerebezem,M.,
            Martin-Diaconescu,V., Maroney,M.J., Declercq,J.P., Soumillion,P.
            and Hols,P.
  TITLE     Lactate racemase is a nickel-dependent enzyme activated by a
            widespread maturation system
  JOURNAL   Nat Commun 5, 3615 (2014)
   PUBMED   24710389
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021387.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09861.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Gemmiger gallinarum"
                     /db_xref="taxon:2779354"
     Protein         1..156
                     /product="lactate racemase domain-containing protein"
                     /GO_function="GO:0050043 - lactate racemase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=17630
     Region          3..>156
                     /region_name="Lar_N"
                     /note="Lactate racemase N-terminal domain; cl15406"
                     /db_xref="CDD:472800"
ORIGIN      
        1 menmkysdte faislnpcqv vaevhanave fprrtvrehi eyaldhpiga gpiedcvqpg
       61 dkvciiisdt trrwqqpsay ltilverlnq agipdedlli lcatgthrkq teaehislvg
      121 enlyrrirfi dhqcddkehl tymgtttrgt pvwlds
//
LOCUS       WP_235983279             398 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Bradyrhizobium australiense].
ACCESSION   WP_235983279
VERSION     WP_235983279.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium australiense
  ORGANISM  Bradyrhizobium australiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12697.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Bradyrhizobium australiense"
                     /db_xref="taxon:2721161"
     Protein         1..398
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=42502
     Region          53..>201
                     /region_name="Axe1"
                     /note="Cephalosporin-C deacetylase or related acetyl
                     esterase [Secondary metabolites biosynthesis, transport
                     and catabolism]; COG3458"
                     /db_xref="CDD:442681"
     Region          134..394
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 mryfnsvdrw rrkwmpnalv avavlglagi asaqtafyda pesllagapg tlvrqepmdg
       61 aplgastyrv lyrstglngr pifvsgvviv pqgapppggr pivawahpts givprcapsl
      121 aiflfqqiqg lrsmisrgfv vaatdypglg tpgphpylvg esegravidi vraarslpra
      181 gegrgftvwg hsqggqaalf agmianayap elrllgvaaa apatdlatlm sddinsiggk
      241 nitamtlwsw hrvygavidn vvdprampai drlarecieg pfdlivrqrt erpleqyflt
      301 vqdpaktepw rslleqnstg vlspeipifl aqgtndqiir pavtqaymdk lckagskvrm
      361 vtlsgighgr aaqastmaav nwltdrfagk vppddcvr
//
LOCUS       WP_235983280             239 aa            linear   BCT 02-MAR-2025
DEFINITION  LamG domain-containing protein [Bradyrhizobium australiense].
ACCESSION   WP_235983280
VERSION     WP_235983280.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium australiense
  ORGANISM  Bradyrhizobium australiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014288.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02210.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Bradyrhizobium australiense"
                     /db_xref="taxon:2721161"
     Protein         1..239
                     /product="LamG domain-containing protein"
                     /calculated_mol_wt=26307
ORIGIN      
        1 mnssnmravi svialaalal pvlaaqptki dfsdetvgae pksfvpvvgv wriesdagkk
       61 vlvvdgrqwk egqssagiad karalygery aefldrvqay ayfpyavvpt venftggeit
      121 vrfeglsgri dqgagilfnl kpngdyltir anclennlvl wkvekgkrss vkwvrntpta
      181 trqwhelkvr ingtkvegyl dgkryledtl aqpvsgrigl wskadshmyf sdytvtaad
//
LOCUS       WP_235983361             791 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Bradyrhizobium
            australiense].
ACCESSION   WP_235983361
VERSION     WP_235983361.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium australiense
  ORGANISM  Bradyrhizobium australiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13458.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Bradyrhizobium australiense"
                     /db_xref="taxon:2721161"
     Protein         1..791
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=86391
     Region          61..417
                     /region_name="PBP1_ABC_ligand_binding-like"
                     /note="type 1 periplasmic ligand-binding domain of
                     uncharacterized ABC (ATPase Binding Cassette)-type active
                     transport systems predicted to be involved in uptake of
                     amino acids, peptides, or inorganic ions; cd06343"
                     /db_xref="CDD:380566"
     Site            order(137..139,160..162,211,262,288)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:380566"
     Region          451..726
                     /region_name="Imp"
                     /note="TRAP-type uncharacterized transport system,
                     periplasmic component [General function prediction only];
                     COG2358"
                     /db_xref="CDD:441925"
ORIGIN      
        1 mgatigitrr rmeqlfwasa rdalrrlnia prrnaaaalv laamagsmmn dqvhaappgs
       61 neirigntap ytgpasaygv iakvisayld kvnaegging rkvnmitydd aydpnktmem
      121 trklveddqa lfilgtigtn tnaaiqpyln skkvpqlfal sgaaawdqpg efpwtmgflp
      181 tytaeaqifa qyilenhprs riavlyqedg mgkeylkglr dglggkvaiv aeapykvtdt
      241 nidaqmaklk asnadvfief ttpkfaimai rrsaelgwrp nhfvasians ysaviqpagp
      301 qnaegllsaa yrlegedaaa agdavfrews afmqryvpsv sktngqavlg ylvsktlvev
      361 lkncgddlsr enimrqarai kgvqlpmmvq gilintspsd hapieqmrmm rftngnwqhf
      421 gpvrsgidpg avsdsfktif kygtatkrdl anqlnantvs lmtgsfgsty aqvgadlasv
      481 ldngtalril pvmgrgsvqa vadilllrgv dagivrkdtl ayldrkdfak dirnqfvyva
      541 kmfneemhvl apktitsmrd ldgktvvvdl pdsstfvtai nvferlgirp hliyqeprla
      601 vdmlrkgevd aivaiegkpl qwlnqvndrn lhlvpvdyak plqeeylpsk lsaadypglv
      661 adggsvetia aeavlasynw apnsdryrrl sllvdtmfdk vaqlqrppfh pkwremapra
      721 tvsgwtrfka aqewldrnmp pgaavsaasg avrpaapvaa paaalapqer dplyreflew
      781 rasrakasss r
//
LOCUS       WP_235983497              96 aa            linear   BCT 02-MAR-2025
DEFINITION  LLM class flavin-dependent oxidoreductase [Bradyrhizobium
            australiense].
ACCESSION   WP_235983497
VERSION     WP_235983497.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium australiense
  ORGANISM  Bradyrhizobium australiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012517.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00296.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Bradyrhizobium australiense"
                     /db_xref="taxon:2721161"
     Protein         1..96
                     /product="LLM class flavin-dependent oxidoreductase"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /calculated_mol_wt=10035
     Region          6..>84
                     /region_name="Flavin_utilizing_monoxygenases"
                     /note="Flavin-utilizing monoxygenases; cl19096"
                     /db_xref="CDD:450250"
ORIGIN      
        1 mdaqipgspe lcdrvvqaae kagfeyllip vgsacweawi tgafmaarss sikpliaarp
       61 gyinpvllak mistfdhmsg armaakttsa sacafk
//
LOCUS       WP_235983518              77 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Bradyrhizobium
            australiense].
ACCESSION   WP_235983518
VERSION     WP_235983518.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium australiense
  ORGANISM  Bradyrhizobium australiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 77)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 77)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 77)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 77)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 77)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 77)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 77)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 77)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 77)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Bradyrhizobium australiense"
                     /db_xref="taxon:2721161"
     Protein         1..77
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=8683
     Region          <1..>72
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mlrqqmddil lrtrrsaekv avlvlgldhf kgvndtlghg igdkllrgva krlqsmlree
       61 dalarlnsde fagrrwr
//
LOCUS       WP_235983754             295 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6279 family lipoprotein [Aquipseudomonas guryensis].
ACCESSION   WP_235983754
VERSION     WP_235983754.1
KEYWORDS    RefSeq.
SOURCE      Aquipseudomonas guryensis
  ORGANISM  Aquipseudomonas guryensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Aquipseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039714.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19795.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Aquipseudomonas guryensis"
                     /db_xref="taxon:2759165"
     Protein         1..295
                     /product="DUF6279 family lipoprotein"
                     /calculated_mol_wt=34135
     Region          40..236
                     /region_name="DUF6279"
                     /note="Family of unknown function (DUF6279); pfam19795"
                     /db_xref="CDD:437627"
ORIGIN      
        1 mhlhrrvial lcatlllsac sridlayrnl dwliswsldd ylqldsaqkd wlkprlrehl
       61 dwhcstqlpa ysawlqrsea lveqpqlqpe qlraqfsefr qaldaiavei tptgtellrg
      121 lnplqvqele aamakedael raeylepame eqiarrrerm eerlqpwfgd lndaqrghva
      181 twanqlgeqn rlwldnrahw qaklraales rrgaefdarl qsllqqraqh wtpayreqfe
      241 rsqqllaelf snllnaadsp qrqhlqqrla alrqdldsla cqppttapav anrse
//
LOCUS       WP_235983758             119 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5629 family protein [Aquipseudomonas guryensis].
ACCESSION   WP_235983758
VERSION     WP_235983758.1
KEYWORDS    RefSeq.
SOURCE      Aquipseudomonas guryensis
  ORGANISM  Aquipseudomonas guryensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Aquipseudomonas.
REFERENCE   1  (residues 1 to 119)
  AUTHORS   Rahmani-Badi,A., Sepehr,S., Fallahi,H. and Heidari-Keshel,S.
  TITLE     Dissection of the cis-2-decenoic acid signaling network in
            Pseudomonas aeruginosa using microarray technique
  JOURNAL   Front Microbiol 6, 383 (2015)
   PUBMED   25972860
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036912.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18629.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Aquipseudomonas guryensis"
                     /db_xref="taxon:2759165"
     Protein         1..119
                     /product="DUF5629 family protein"
                     /calculated_mol_wt=12696
     Region          18..101
                     /region_name="DUF5629"
                     /note="Family of unknown function (DUF5629); pfam18629"
                     /db_xref="CDD:436634"
ORIGIN      
        1 mayhgasfpa rlnamtttll nalqhadmll idglhawqfe lieaasgeqv qlrvecmdgr
       61 errvwnfsaa aiaaasqgtt adswqlaage lsheliilsg vnasndddde aandevvvd
//
LOCUS       WP_235983765             526 aa            linear   BCT 02-MAR-2025
DEFINITION  tannase/feruloyl esterase family alpha/beta hydrolase
            [Bradyrhizobium australiense].
ACCESSION   WP_235983765
VERSION     WP_235983765.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium australiense
  ORGANISM  Bradyrhizobium australiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 526)
  AUTHORS   de Vries,R.P., vanKuyk,P.A., Kester,H.C. and Visser,J.
  TITLE     The Aspergillus niger faeB gene encodes a second feruloyl esterase
            involved in pectin and xylan degradation and is specifically
            induced in the presence of aromatic compounds
  JOURNAL   Biochem J 363 (Pt 2), 377-386 (2002)
   PUBMED   11931668
REFERENCE   2  (residues 1 to 526)
  AUTHORS   Hatamoto,O., Watarai,T., Kikuchi,M., Mizusawa,K. and Sekine,H.
  TITLE     Cloning and sequencing of the gene encoding tannase and a
            structural study of the tannase subunit from Aspergillus oryzae
  JOURNAL   Gene 175 (1-2), 215-221 (1996)
   PUBMED   8917102
  REMARK    Erratum:[Gene 1997 Feb 20;186(1):153]
REFERENCE   3  (residues 1 to 526)
  AUTHORS   Kroon,P.A., Faulds,C.B. and Williamson,G.
  TITLE     Purification and characterization of a novel esterase induced by
            growth of Aspergillus niger on sugar-beet pulp
  JOURNAL   Biotechnol Appl Biochem 23 (3), 255-262 (1996)
   PUBMED   8679110
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019157.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07519.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Bradyrhizobium australiense"
                     /db_xref="taxon:2721161"
     Protein         1..526
                     /product="tannase/feruloyl esterase family alpha/beta
                     hydrolase"
                     /calculated_mol_wt=56453
     Region          54..525
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 mvgdaaatcs dlirpadnav ridsatmiap sqlavaerap tpagriappn pefckvlgqi
       61 apsdprappi kfqvnlpvew ngrslqyggg gfngvlitgl alppaypfga psplargfvt
      121 ygtdsghetr pgeppqlfal ndeafenfah rsykrvrdaa valmvraygk ppaklyfmgs
      181 seggrealtm aqrypddfdg ifarvpvinw vglqhagtrs glatmgegwi rpaqvelvak
      241 avlaacdked gaedqlvlnp vgckakfqpe slrcaaeqsg dqclteaqia airtlhatyk
      301 fsfplengld dypgwgvsge ntpafgptgg wvawwlgkaa paqpplpang iawiygaggi
      361 qyvfardpkl dvttyrpedh kerllqvsql mdstnpdlsr faarggklvi lenmadyaqs
      421 pyagiryfen vqralgrekt aefarlytap gvdhvgsgap anvdmltvlv dwvengkapg
      481 dlevieqkie apefettral plcqwpawph yksgptssaa sftcap
//
LOCUS       WP_235983806             159 aa            linear   BCT 02-MAR-2025
DEFINITION  transglycosylase SLT domain-containing protein [Bradyrhizobium
            australiense].
ACCESSION   WP_235983806
VERSION     WP_235983806.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium australiense
  ORGANISM  Bradyrhizobium australiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 159)
  AUTHORS   Koraimann,G.
  TITLE     Lytic transglycosylases in macromolecular transport systems of
            Gram-negative bacteria
  JOURNAL   Cell Mol Life Sci 60 (11), 2371-2388 (2003)
   PUBMED   14625683
REFERENCE   2  (residues 1 to 159)
  AUTHORS   Mushegian,A.R., Fullner,K.J., Koonin,E.V. and Nester,E.W.
  TITLE     A family of lysozyme-like virulence factors in bacterial pathogens
            of plants and animals
  JOURNAL   Proc Natl Acad Sci U S A 93 (14), 7321-7326 (1996)
   PUBMED   8692991
REFERENCE   3  (residues 1 to 159)
  AUTHORS   Thunnissen,A.M., Rozeboom,H.J., Kalk,K.H. and Dijkstra,B.W.
  TITLE     Structure of the 70-kDa soluble lytic transglycosylase complexed
            with bulgecin A. Implications for the enzymatic mechanism
  JOURNAL   Biochemistry 34 (39), 12729-12737 (1995)
   PUBMED   7548026
REFERENCE   4  (residues 1 to 159)
  AUTHORS   Koonin,E.V. and Rudd,K.E.
  TITLE     A conserved domain in putative bacterial and bacteriophage
            transglycosylases
  JOURNAL   Trends Biochem Sci 19 (3), 106-107 (1994)
   PUBMED   8203016
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013618.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01464.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Bradyrhizobium australiense"
                     /db_xref="taxon:2721161"
     Protein         1..159
                     /product="transglycosylase SLT domain-containing protein"
                     /calculated_mol_wt=16741
     Region          <13..>99
                     /region_name="MltE"
                     /note="Soluble lytic murein transglycosylase or regulatory
                     protein s (may contain LysM/invasin domain) [Cell
                     wall/membrane/envelope biogenesis]; COG0741"
                     /db_xref="CDD:440504"
ORIGIN      
        1 mvspsamaqs rahyesmvaa hasannvpea lvhrvivres kyhpnlvgrg gtiglmqikl
       61 ptarglgytg daaglrdpdt nlawgikyla gayraaggdh gramryyasg yyyaakrqrp
      121 erplqiapvl asgatpkiva apvdaarmpa danalqtak
//
LOCUS       WP_235983815             154 aa            linear   BCT 02-MAR-2025
DEFINITION  phage holin family protein [Aquipseudomonas guryensis].
ACCESSION   WP_235983815
VERSION     WP_235983815.1
KEYWORDS    RefSeq.
SOURCE      Aquipseudomonas guryensis
  ORGANISM  Aquipseudomonas guryensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Aquipseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018980.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07332.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Aquipseudomonas guryensis"
                     /db_xref="taxon:2759165"
     Protein         1..154
                     /product="phage holin family protein"
                     /calculated_mol_wt=16661
     Region          40..153
                     /region_name="Phage_holin_3_6"
                     /note="Putative Actinobacterial Holin-X, holin superfamily
                     III; cl21707"
                     /db_xref="CDD:473939"
ORIGIN      
        1 mtqqpeehaa pvdetradaq ahlgpppndl nlfallrllr sagrallaqt alhgqlarve
       61 waeernrllq mllatlfgfa cgltllllcs tlvlvlswat pyripallgl llvhglgcaa
      121 awyrfrllaa rssasfaatr eelaadlall ksrl
//
LOCUS       WP_235983867             305 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6328 family protein [Bradyrhizobium australiense].
ACCESSION   WP_235983867
VERSION     WP_235983867.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium australiense
  ORGANISM  Bradyrhizobium australiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 305)
  AUTHORS   Ramos,A., Lombo,F., Brana,A.F., Rohr,J., Mendez,C. and Salas,J.A.
  TITLE     Biosynthesis of elloramycin in Streptomyces olivaceus requires
            glycosylation by enzymes encoded outside the aglycon cluster
  JOURNAL   Microbiology (Reading) 154 (Pt 3), 781-788 (2008)
   PUBMED   18310024
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039409.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19853.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Bradyrhizobium australiense"
                     /db_xref="taxon:2721161"
     Protein         1..305
                     /product="DUF6328 family protein"
                     /calculated_mol_wt=32670
     Region          11..135
                     /region_name="DUF6328"
                     /note="Family of unknown function (DUF6328); pfam19853"
                     /db_xref="CDD:466208"
     Region          163..>261
                     /region_name="DUF6328"
                     /note="Family of unknown function (DUF6328); pfam19853"
                     /db_xref="CDD:466208"
ORIGIN      
        1 mevesrlkta ldesrllilg aqvlfgfqfe avfqerfsdi seasrlihsa glvlmlisis
       61 lliapslfhq iifqgesrpe aiatatmlag asllpltvgl gisafvtfef lfgrmtggav
      121 glsftaiglg flyglgfalk rnrkkqmpet snktslkski eqmltearvi ipggqallgf
      181 qlvatltkaf gelpalfkyi hcaglcaval avvllmtpaa vhrlafdged dpeffkigsr
      241 lviaasipla igissdvavv ffktthdtai alsagaaalv allgfwlvyp awhrvqfrtr
      301 ranpv
//
LOCUS       WP_235983906             115 aa            linear   BCT 02-MAR-2025
DEFINITION  SRPBCC family protein [Mesorhizobium neociceri].
ACCESSION   WP_235983906
VERSION     WP_235983906.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium neociceri
  ORGANISM  Mesorhizobium neociceri
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 115)
  AUTHORS   Nakabayashi,M., Shibata,N., Komori,H., Ueda,Y., Iino,H.,
            Ebihara,A., Kuramitsu,S. and Higuchi,Y.
  TITLE     Structure of a conserved hypothetical protein, TTHA0849 from
            Thermus thermophilus HB8, at 2.4 A resolution: a putative member of
            the StAR-related lipid-transfer (START) domain superfamily
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 61 (Pt 12),
            1027-1031 (2005)
   PUBMED   16511226
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015331.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03364.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Mesorhizobium neociceri"
                     /db_xref="taxon:1307853"
     Protein         1..115
                     /product="SRPBCC family protein"
                     /calculated_mol_wt=12649
     Region          6..>104
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
ORIGIN      
        1 mpsnvfrfde swdipeatpq qvwdvlsdae llplwwgdvy kevvpldkrg kgvvgsraka
       61 rargalpyel sfiveaaele pgrlvvvktf gdfdglwrae lspscnaqdr masag
//
LOCUS       WP_235984067             148 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Bradyrhizobium australiense].
ACCESSION   WP_235984067
VERSION     WP_235984067.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium australiense
  ORGANISM  Bradyrhizobium australiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 148)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Bradyrhizobium australiense"
                     /db_xref="taxon:2721161"
     Protein         1..148
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=16179
     Region          <1..121
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 milatlletg ldpqrleiei tegvlfwdfe ralsilrrir sfgiriamdd fgagysslst
       61 crtfhstrsr strssfpgsa tvflagaaiq simglgrtla lpmiaesvet eeqwtflare
      121 gqagelvvkr emrdpclvpr algnvlvg
//
LOCUS       WP_235984168             261 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Bradyrhizobium australiense].
ACCESSION   WP_235984168
VERSION     WP_235984168.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium australiense
  ORGANISM  Bradyrhizobium australiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Bradyrhizobium australiense"
                     /db_xref="taxon:2721161"
     Protein         1..261
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=28525
     Region          <14..124
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Region          <133..>233
                     /region_name="PotB"
                     /note="ABC-type spermidine/putrescine transport system,
                     permease component I [Amino acid transport and
                     metabolism]; COG1176"
                     /db_xref="CDD:440789"
ORIGIN      
        1 mgsgyglphr rlqgaapasw adlwytakfp gdramysiad vapemefalm pagvppekly
       61 pldvdkapas ydkikksvvk wwqtgvqptq mlsdreivmt tvwnarmttl qeqgvpaais
      121 wnqglsnsda wgswmvllgr hgimnealla mhlitqpirl lnttlateia mihillphmi
      181 lpianalrqi dpslrraasv lgatplgtfw qvilplsmld vaagvvlvfv vsiprqsrgf
      241 rnwaaqsgrg tltrplilla a
//
LOCUS       WP_235984187             348 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing
            protein [Bradyrhizobium australiense].
ACCESSION   WP_235984187
VERSION     WP_235984187.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium australiense
  ORGANISM  Bradyrhizobium australiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 348)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02737.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Bradyrhizobium australiense"
                     /db_xref="taxon:2721161"
     Protein         1..348
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /GO_function="GO:0070403 - NAD+ binding [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=37788
     Region          21..>341
                     /region_name="PRK07531"
                     /note="carnitine 3-dehydrogenase"
                     /db_xref="CDD:236044"
ORIGIN      
        1 mfeglpravg llgggviggg waarfllngv dvrlhgrspa tiervqkmla narrvyrrlt
       61 qvplpaegsl tvvnsvadav rgvelvqesv pdrlelkqql laaasraaap gtlicsstsg
      121 lrpsllqvgm dhperllvah pfnpvyllpl velcagqrta petvaraaei yrsvgmhplv
      181 vrkevdgfia nrlqeavwre alwlvhddva tvqeiddavr ysiglrraim gpiqtfriai
      241 petgarrsme lfgpalklpr tkltevpeft dafldklgeq sdaqaenltv seleqkrddc
      301 lvavlqglra qgygagetla rweqrlrdla spahqglrpa addatdtv
//
LOCUS       WP_235984188              73 aa            linear   BCT 02-MAR-2025
DEFINITION  nuclear transport factor 2 family protein [Mesorhizobium
            neociceri].
ACCESSION   WP_235984188
VERSION     WP_235984188.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium neociceri
  ORGANISM  Mesorhizobium neociceri
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024966.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13577.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Mesorhizobium neociceri"
                     /db_xref="taxon:1307853"
     Protein         1..73
                     /product="nuclear transport factor 2 family protein"
                     /calculated_mol_wt=7586
ORIGIN      
        1 mnalknvafa aglalaptda ggaepsgwra laderaviri adaidravda qdwklarsyf
       61 ahrvtvdfss lsg
//
LOCUS       WP_235984205             110 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Mesorhizobium neociceri].
ACCESSION   WP_235984205
VERSION     WP_235984205.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium neociceri
  ORGANISM  Mesorhizobium neociceri
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 110)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 110)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Mesorhizobium neociceri"
                     /db_xref="taxon:1307853"
     Protein         1..110
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=11911
     Region          <29..82
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
ORIGIN      
        1 mrqgirpdad sfvvaqvdgq plqprslthe wvrvlgktsl prirfhdlah atqmlsagvh
       61 pkiaserlgh snigitldly shvmpgmlad aaeqvdvalq avisdnrkgk
//
LOCUS       WP_235984308             276 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Mesorhizobium neociceri].
ACCESSION   WP_235984308
VERSION     WP_235984308.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium neociceri
  ORGANISM  Mesorhizobium neociceri
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025052.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13671.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Mesorhizobium neociceri"
                     /db_xref="taxon:1307853"
     Protein         1..276
                     /product="AAA family ATPase"
                     /calculated_mol_wt=29883
     Region          7..>266
                     /region_name="bacter_Pnkp"
                     /note="polynucleotide kinase-phosphatase; TIGR04075"
                     /db_xref="CDD:274963"
ORIGIN      
        1 mrepdktdlt iadfalvvli gstgsgkstf aarhflptei issdrcralv sdnetdqdvs
       61 adafdlarei agkrlkhrkl avidatnvra adrkawvela rkwhalpvav vidpgvdvcv
      121 arnalradrp fgagvaqrmt teirkglggl qregfrqvwk ltseasidaa kvsrqplwtd
      181 krddhgpfdi igdvhgcade lqallaqlgy svawsedhge rtvtvtpseg rkivfvgdlv
      241 drgpnvpdal riamsmvaag taycvqaskr racgrs
//
LOCUS       WP_235984311             326 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphodiester glycosidase family protein [Mesorhizobium
            neociceri].
ACCESSION   WP_235984311
VERSION     WP_235984311.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium neociceri
  ORGANISM  Mesorhizobium neociceri
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 326)
  AUTHORS   Das,D., Lee,W.S., Grant,J.C., Chiu,H.J., Farr,C.L., Vance,J.,
            Klock,H.E., Knuth,M.W., Miller,M.D., Elsliger,M.A., Deacon,A.M.,
            Godzik,A., Lesley,S.A., Kornfeld,S. and Wilson,I.A.
  TITLE     Structure and function of the DUF2233 domain in bacteria and in the
            human mannose 6-phosphate uncovering enzyme
  JOURNAL   J Biol Chem 288 (23), 16789-16799 (2013)
   PUBMED   23572527
REFERENCE   2  (residues 1 to 326)
  AUTHORS   Kang,C., Riazuddin,S., Mundorff,J., Krasnewich,D., Friedman,P.,
            Mullikin,J.C. and Drayna,D.
  TITLE     Mutations in the lysosomal enzyme-targeting pathway and persistent
            stuttering
  JOURNAL   N Engl J Med 362 (8), 677-685 (2010)
   PUBMED   20147709
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021507.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09992.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Mesorhizobium neociceri"
                     /db_xref="taxon:1307853"
     Protein         1..326
                     /product="phosphodiester glycosidase family protein"
                     /calculated_mol_wt=35278
     Region          137..275
                     /region_name="NAGPA"
                     /note="Phosphodiester glycosidase; cl46789"
                     /db_xref="CDD:481129"
ORIGIN      
        1 mkkaisiavv lstlavlsav gyvwqkhgvy glnvllrrgg sywvtvapdd arlspamrla
       61 lkpeipgvta gasswsetep gfqvreipvm agdreidrly lnrfdpakfg fvahnepsga
      121 kdidqweaal dpdgacgtvl ivngsyfglk geadtpfisk gdrlgpdeyd akagawvana
      181 sgtqvvdlag rdwravlena enamvsypll vgedgrnnvr aksnwlanrt fiaedrqgri
      241 ivgstkdaff sldrlanfll eaelelktal nldggpiagl svrsgnyhlk hyarweaqvv
      301 dgkvsllqap ldvawgmpvv ltverr
//
LOCUS       WP_235984365              79 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6471 domain-containing protein [Mesorhizobium neociceri].
ACCESSION   WP_235984365
VERSION     WP_235984365.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium neociceri
  ORGANISM  Mesorhizobium neociceri
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039792.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20075.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Mesorhizobium neociceri"
                     /db_xref="taxon:1307853"
     Protein         1..79
                     /product="DUF6471 domain-containing protein"
                     /calculated_mol_wt=8732
     Region          11..75
                     /region_name="DUF6471"
                     /note="Domain of unknown function (DUF6471); pfam20075"
                     /db_xref="CDD:437907"
ORIGIN      
        1 mmadnsptar yeeqaknilk gelkrrgmty atlaeklkeh gahdternla nkisrgsfta
       61 affmmcldvi gvrqvslea
//
LOCUS       WP_235984418             209 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Mesorhizobium
            neociceri].
ACCESSION   WP_235984418
VERSION     WP_235984418.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium neociceri
  ORGANISM  Mesorhizobium neociceri
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Mesorhizobium neociceri"
                     /db_xref="taxon:1307853"
     Protein         1..209
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=22163
     Region          1..201
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mivdkraler eclarglveh nptlrvsavg sldeiqhiag eaepsailvi lgsrkvsdqs
       61 graelahfia eigavpvivv vdsdepaevl aalecgargy iptsvtvkva aeaiglarag
      121 gifvpascvl alreiihssa ngarplagmf tireaavvea lkkgkankii ayelnlcest
      181 vkvhirnimk klkatnrtev ayklrqmll
//
LOCUS       WP_235984433             298 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Mesorhizobium
            neociceri].
ACCESSION   WP_235984433
VERSION     WP_235984433.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium neociceri
  ORGANISM  Mesorhizobium neociceri
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 298)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Mesorhizobium neociceri"
                     /db_xref="taxon:1307853"
     Protein         1..298
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=31686
     Region          8..292
                     /region_name="PRK11139"
                     /note="DNA-binding transcriptional activator GcvA;
                     Provisional"
                     /db_xref="CDD:182990"
ORIGIN      
        1 mavnpprprm pplnslrafe aaarhqsfak aadelgvtpa avshqvkale awlgsplfar
       61 haqglhltea graalpafst afdamglavq elrisaprpq vsiaalpsia qlwlaprlpa
      121 lrtalpalrp sihtleeppd frrepfdlai fltrhapags rafklcddai fpvcapalaq
      181 qlktpadlss qlllwdttwt gdwslwfeaa gvkgpsidtg sefslysmal qaaidgagvl
      241 mghealvsra laagslvapf prrvatglsl silapdrppa qaaqmidwll aqdgtkrd
//
LOCUS       WP_235984555              93 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6894 family protein [Mesorhizobium neociceri].
ACCESSION   WP_235984555
VERSION     WP_235984555.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium neociceri
  ORGANISM  Mesorhizobium neociceri
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047035.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21834.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Mesorhizobium neociceri"
                     /db_xref="taxon:1307853"
     Protein         1..93
                     /product="DUF6894 family protein"
                     /calculated_mol_wt=10333
ORIGIN      
        1 mtgdgdlsmn ryffdvynsd gqvldedgqf fesrdrarae alrvlhdvar dempdrdlvk
       61 itvkvrsdng aqmfeaslil ttgwsasafv apk
//
LOCUS       WP_235984564             435 aa            linear   BCT 02-MAR-2025
DEFINITION  SIR2 family protein [Mesorhizobium neociceri].
ACCESSION   WP_235984564
VERSION     WP_235984564.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium neociceri
  ORGANISM  Mesorhizobium neociceri
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024685.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13289.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Mesorhizobium neociceri"
                     /db_xref="taxon:1307853"
     Protein         1..435
                     /product="SIR2 family protein"
                     /calculated_mol_wt=48617
     Region          6..143
                     /region_name="SIR2"
                     /note="SIR2 superfamily of proteins includes silent
                     information regulator 2 (Sir2) enzymes which catalyze
                     NAD+-dependent protein/histone deacetylation, where the
                     acetyl group from the lysine epsilon-amino group is
                     transferred to the ADP-ribose moiety of NAD+; cl00195"
                     /db_xref="CDD:444738"
     Region          <217..>293
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mefpwtsiyt tnydngieig lqnirkkhsp lnnladpssp tsgvpvvhlh gfaeawtnen
       61 ferscildad syrnltgvsn wmerlrseie raeivvflgf saadfhlsqv ffnatglqnk
      121 affinrptas pdpderatqe efgevlytgr eafadqilqi lkqdapkepp lasferfvlp
      181 etttsvppva aiedlfiwgk versqikrdw dvgtsdyhvl rdeaakiveh lntrgniafv
      241 hgdicegksl ailgaqiqia rgrpvfqlkh fysdllnevs sifasypdav lvvegcfalr
      301 edrltalvrq isaseggmil sarsiateae seklrvirti psasdirlgk vkgsevdsli
      361 alidqiagwr efsaltlsdr rrfierdcgg vfpsvllrll kskyvrnayl aeynklsgid
      421 lndkrmmita lisqe
//
LOCUS       WP_235984658              81 aa            linear   BCT 02-MAR-2025
DEFINITION  glucan biosynthesis protein [Klebsiella pneumoniae].
ACCESSION   WP_235984658
VERSION     WP_235984658.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 81)
  AUTHORS   Bohin,J.P.
  TITLE     Osmoregulated periplasmic glucans in Proteobacteria
  JOURNAL   FEMS Microbiol Lett 186 (1), 11-19 (2000)
   PUBMED   10779706
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016252.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04349.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..81
                     /product="glucan biosynthesis protein"
                     /GO_component="GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /GO_process="GO:0016051 - carbohydrate biosynthetic
                     process [Evidence IEA]"
                     /calculated_mol_wt=8998
     Region          <3..>77
                     /region_name="MdoG"
                     /note="Periplasmic glucan biosynthesis protein, MdoG;
                     cl19308"
                     /db_xref="CDD:473161"
ORIGIN      
        1 mvfagfkvly piskdkndei vsmlrasyfr vigagqvygl sargtaidta lpsgeefprf
       61 kefwierpkp tdkrltilci a
//
LOCUS       WP_235984660              77 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-dependent oxidoreductase [Klebsiella pneumoniae].
ACCESSION   WP_235984660
VERSION     WP_235984660.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 77)
  AUTHORS   Dengler,U., Niefind,K., Kiess,M. and Schomburg,D.
  TITLE     Crystal structure of a ternary complex of D-2-hydroxyisocaproate
            dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate
            at 1.9 A resolution
  JOURNAL   J Mol Biol 267 (3), 640-660 (1997)
   PUBMED   9126843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02826.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..77
                     /product="NAD(P)-dependent oxidoreductase"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
                     /calculated_mol_wt=8553
     Region          <1..76
                     /region_name="NADB_Rossmann"
                     /note="Rossmann-fold NAD(P)(+)-binding proteins; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 minllpntlk psallinnys knyrmariss arrvvfmfve ddllaaldsg kvkgacldvf
       61 nreplppees plwqhpa
//
LOCUS       WP_235984686             219 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Actinomyces trachealis].
ACCESSION   WP_235984686
VERSION     WP_235984686.1
KEYWORDS    RefSeq.
SOURCE      Actinomyces trachealis
  ORGANISM  Actinomyces trachealis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Actinomycetales; Actinomycetaceae; Actinomyces.
REFERENCE   1  (residues 1 to 219)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Actinomyces trachealis"
                     /db_xref="taxon:2763540"
     Protein         1..219
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=23938
     Region          7..210
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mstsavpemv kvmiiddhei vrrgiaeiid raegldivae agsrtealrr aelmrpdvvl
       61 vdlqlpdgtg ielmrelrea vpealpivlt sfdddealae alevgarayl lktvhgaeis
      121 evvkavaagr vlldertvtr rradhddpta dltnaerkvl eligdglsnr eigerlgvae
      181 ktvknhitsl lakmglqrrt qvaawvagqr asgwrneqr
//
LOCUS       WP_235984692             270 aa            linear   BCT 02-MAR-2025
DEFINITION  phospholipase D-like domain-containing protein [Actinomyces
            trachealis].
ACCESSION   WP_235984692
VERSION     WP_235984692.1
KEYWORDS    RefSeq.
SOURCE      Actinomyces trachealis
  ORGANISM  Actinomyces trachealis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Actinomycetales; Actinomycetaceae; Actinomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13091.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Actinomyces trachealis"
                     /db_xref="taxon:2763540"
     Protein         1..270
                     /product="phospholipase D-like domain-containing protein"
                     /calculated_mol_wt=28853
     Region          <88..264
                     /region_name="DISARM_DrmC_I"
                     /note="DISARM system phospholipase D-like protein DrmC;
                     NF038319"
                     /db_xref="CDD:468473"
ORIGIN      
        1 mttvrvdvap dllrwavrra rwdeetthrr apkldawvtg tarptlkqie kfaadthtpf
       61 gllflpeppv enlpipdmra mrdagvdgps adllgagalt gdvfgmvssa mtsvvcatyn
      121 lqptsalwta ltalvrerpg vavrlyvdtq aadgwfartd grsarrhggv agleggsrga
      181 qglstdemaq llpgaavlrt rapgegerpv tshakflsvd hgfllvgsan fsysaeernv
      241 elglrvddpa laasvekqmr dleasvrvtp
//
LOCUS       WP_235985011             497 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase 87 family protein [Actinomyces trachealis].
ACCESSION   WP_235985011
VERSION     WP_235985011.1
KEYWORDS    RefSeq.
SOURCE      Actinomyces trachealis
  ORGANISM  Actinomyces trachealis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Actinomycetales; Actinomycetaceae; Actinomyces.
REFERENCE   1  (residues 1 to 497)
  AUTHORS   Birch,H.L., Alderwick,L.J., Bhatt,A., Rittmann,D., Krumbach,K.,
            Singh,A., Bai,Y., Lowary,T.L., Eggeling,L. and Besra,G.S.
  TITLE     Biosynthesis of mycobacterial arabinogalactan: identification of a
            novel alpha(1-->3) arabinofuranosyltransferase
  JOURNAL   Mol Microbiol 69 (5), 1191-1206 (2008)
   PUBMED   18627460
REFERENCE   2  (residues 1 to 497)
  AUTHORS   Morita,Y.S., Sena,C.B., Waller,R.F., Kurokawa,K., Sernee,M.F.,
            Nakatani,F., Haites,R.E., Billman-Jacobe,H., McConville,M.J.,
            Maeda,Y. and Kinoshita,T.
  TITLE     PimE is a polyprenol-phosphate-mannose-dependent
            mannosyltransferase that transfers the fifth mannose of
            phosphatidylinositol mannoside in mycobacteria
  JOURNAL   J Biol Chem 281 (35), 25143-25155 (2006)
   PUBMED   16803893
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021134.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09594.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Actinomyces trachealis"
                     /db_xref="taxon:2763540"
     Protein         1..497
                     /product="glycosyltransferase 87 family protein"
                     /GO_function="GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=53886
     Region          115..426
                     /region_name="PMT_2"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; cl21590"
                     /db_xref="CDD:473917"
ORIGIN      
        1 mslhtdspeg rpggaalpeg kttprdighr dqtaergsdr atpsargshr adplprggrr
       61 rlrkpapava tshphpaddl adlagpvavv lgwillalsc ypmlitkdgt qrfkfdawvy
      121 yhaikhwqdg gdlyqwwafp aehlypftyp pfaawvmkpl twvdehsaqv lltvvtplca
      181 agvvlllarv lqaspgrasl lapwgalaac tllepfvksi eygqinaill lmvavdllal
      241 rpggplarlt pvrgvlsgia aaikltpaia llvllvrrew raagvmvgag lgvtvlaavl
      301 spaetleyft ktmldptrag naeyggnqnl rallvrflpq tvekpvwalc mvavlvaawl
      361 lagrlealre sdcpealvll lqtsvvmvlg llispiswsh hwvwglptlv glgmlayrqr
      421 sralllvsva gvavmvmamh wwmpehghve lswpvwakvt gssytlwala agavlwwhtg
      481 ellagrreae hpareil
//
LOCUS       WP_235985050             423 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Acinetobacter baretiae].
ACCESSION   WP_235985050
VERSION     WP_235985050.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baretiae
  ORGANISM  Acinetobacter baretiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter.
REFERENCE   1  (residues 1 to 423)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 423)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 423)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 423)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Acinetobacter baretiae"
                     /db_xref="taxon:2605383"
     Protein         1..423
                     /product="ATP-binding protein"
                     /calculated_mol_wt=47038
     Region          68..>147
                     /region_name="GST_C_family"
                     /note="C-terminal, alpha helical domain of the Glutathione
                     S-transferase family; cl02776"
                     /db_xref="CDD:470672"
     Site            order(71,75..76,136,137)
                     /site_type="other"
                     /note="substrate binding pocket (H-site) [chemical
                     binding]"
                     /db_xref="CDD:198286"
     Site            order(71,128,131..132,135,137)
                     /site_type="other"
                     /note="N-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:198286"
     Region          174..409
                     /region_name="KdpD"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; COG2205"
                     /db_xref="CDD:441807"
ORIGIN      
        1 mstqsvcvqd iddisasvlv lpkklkedak lnklllkikt ilgahhvvli lpheseakvl
       61 natqttiqdi acdvqlfqhl nqlhhhnqsv ldekkaeylq yrvyieqyfg avnrlvafal
      121 cddvldcmah icvfdqnhhp fdsdltalvl elcsdysehi glqqkhdelt ynheqivaln
      181 fsqtkflqii ahdlrapfhg ilgfsevlae elesldtssi qnissylndt akatyhllen
      241 llnwamaegg rfachpvrfd lkqtsqivsn vlsslayskn ielvdtipqg tyvyadlnmv
      301 tsilqnlvsn alkftpqdgs gkvlisvkqi erfmalsisd tglgmneiqq srifernikt
      361 tlkgtngekg tglglvlckr fadlnqgqit vqskegqgtt ftvqlpidel svskaptevf
      421 vqa
//
LOCUS       WP_235985120             487 aa            linear   BCT 02-MAR-2025
DEFINITION  DcaP family trimeric outer membrane transporter, partial
            [Acinetobacter baretiae].
ACCESSION   WP_235985120
VERSION     WP_235985120.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baretiae
  ORGANISM  Acinetobacter baretiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter.
REFERENCE   1  (residues 1 to 487)
  AUTHORS   Bhamidimarri,S.P., Zahn,M., Prajapati,J.D., Schleberger,C.,
            Soderholm,S., Hoover,J., West,J., Kleinekathofer,U., Bumann,D.,
            Winterhalter,M. and van den Berg,B.
  TITLE     A Multidisciplinary Approach toward Identification of Antibiotic
            Scaffolds for Acinetobacter baumannii
  JOURNAL   Structure 27 (2), 268-280 (2019)
   PUBMED   30554842
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039990.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19577.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Acinetobacter baretiae"
                     /db_xref="taxon:2605383"
     Protein         <1..487
                     /product="DcaP family trimeric outer membrane transporter"
     Region          124..487
                     /region_name="DcaP"
                     /note="DcaP outer membrane protein; pfam19577"
                     /db_xref="CDD:437409"
ORIGIN      
        1 vktvtnffcl rveksvvkvn klalsigaal vmgavgstqa atttthtqkk vvelesqvaq
       61 lqqlvqqlsa qqqqqvaqqq qiaqqqqeqs vqlqqnaila lekpnlapke ssskpgwmtl
      121 adgktqlkly grvraevtyd ldntnsstnd iynrtnkvpl nsdnttkqvm nataansrlg
      181 ldllrstdyg dlkakfegdf msssytngag gfrirhayve lgkwtvgqtn spfvtdtpni
      241 vdangimgsa slrpvqvryt qpitknqkll vaiegttgkd tesntltqtq ggsrlptlsf
      301 qyavntpdkk gslkavgflh enrvstnnnn dieklawgvg vggkydltkn dtlfanyyhi
      361 vgdnrymiyp ndaaysvtss ggnpqrinqt emdavfagyt hkwnaqfrss vlggaiwnsk
      421 dsdyskvasn fnsnaynksm ynvlvntfft pvkdfelgae ytygqrktft nkegdysrin
      481 fvaqynf
//
LOCUS       WP_235985134             241 aa            linear   BCT 02-MAR-2025
DEFINITION  replication initiation protein [Acinetobacter baretiae].
ACCESSION   WP_235985134
VERSION     WP_235985134.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baretiae
  ORGANISM  Acinetobacter baretiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter.
REFERENCE   1  (residues 1 to 241)
  AUTHORS   Giraldo,R. and Diaz-Orejas,R.
  TITLE     Similarities between the DNA replication initiators of
            Gram-negative bacteria plasmids (RepA) and eukaryotes
            (Orc4p)/archaea (Cdc6p)
  JOURNAL   Proc Natl Acad Sci U S A 98 (9), 4938-4943 (2001)
   PUBMED   11296251
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015076.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03090.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Acinetobacter baretiae"
                     /db_xref="taxon:2605383"
     Protein         1..241
                     /product="replication initiation protein"
                     /calculated_mol_wt=27068
     Region          28..156
                     /region_name="Replicase"
                     /note="Replicase family; pfam03090"
                     /db_xref="CDD:427129"
     Region          170..241
                     /region_name="PriCT_1"
                     /note="Primase C terminal 1 (PriCT-1); cl07362"
                     /db_xref="CDD:447340"
ORIGIN      
        1 mnnmqfaedf yknlapkpyc sygkgtatli rskrcavkfp liqvnpphiv rylvfdidap
       61 daylhfsdae lpvptwiakn knnghchicy elktpvckte narlkplayl aaiehsyank
      121 lgadlnyagl ltknpinten wevtllnsrp feldeladyv dldyrpkkmt kneisglgrn
      181 camfdsvrfw aykavggsva agyenwhskv lntaqsenya fsqplpysev katassvakw
      241 v
//
LOCUS       WP_235985171             461 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Acinetobacter baretiae].
ACCESSION   WP_235985171
VERSION     WP_235985171.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baretiae
  ORGANISM  Acinetobacter baretiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter.
REFERENCE   1  (residues 1 to 461)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 461)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019348.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07728.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Acinetobacter baretiae"
                     /db_xref="taxon:2605383"
     Protein         1..461
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=52963
     Region          <180..449
                     /region_name="McrB"
                     /note="5-methylcytosine-specific restriction endonuclease
                     McrBC, GTP-binding regulatory subunit McrB [Defense
                     mechanisms]; COG1401"
                     /db_xref="CDD:441011"
ORIGIN      
        1 mtvssnisrq lvdsfvhrki kllktkgsge aklhigsaes sgdfdsffns yadeniyyfk
       61 knnllefllk ekfefycqfi nqykevspey wdsiyeevla lseeitfklt sfndgkryyi
      121 rsesgdvfnd lvrrialpli siltirkeat dkflftldvd ftgsnkpvve etlivgkgyn
      181 kiiygapgag ksatvsnrvs knyirtvfhp etqysdfigc lkphidsdtr nitysfrkgp
      241 fiqilekall dpenhyylii eelnrantaa vfgeifqlld rdaegkseyp iliqdsdlyd
      301 slkdikglet heniskreli ipgnlsiiat mnssdqavfp ldtafkrrws feylpidftn
      361 caigeiptnh selpkvewen fahaintvli qlkvvedkll gpwfikdsdl ttdtvkdtli
      421 gkicsylwdd alkyknknde ifkreilsyg qlhqmysnvf k
//
LOCUS       WP_235985179             179 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Paracholeplasma morum].
ACCESSION   WP_235985179
VERSION     WP_235985179.1
KEYWORDS    RefSeq.
SOURCE      Paracholeplasma morum (Acholeplasma morum)
  ORGANISM  Paracholeplasma morum
            Bacteria; Bacillati; Mycoplasmatota; Mollicutes; Acholeplasmatales;
            Acholeplasmataceae; Paracholeplasma.
REFERENCE   1  (residues 1 to 179)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07883.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Paracholeplasma morum"
                     /db_xref="taxon:264637"
     Protein         1..179
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=20421
     Region          4..179
                     /region_name="PRK09943"
                     /note="HTH-type transcriptional regulator PuuR"
                     /db_xref="CDD:182158"
     Region          91..175
                     /region_name="cupin_XRE_C"
                     /note="XRE (Xenobiotic Response Element) family
                     transcriptional regulators, C-terminal cupin domain;
                     cd02209"
                     /db_xref="CDD:380339"
     Site            order(104,106,117,120,124,158,160,172)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380339"
ORIGIN      
        1 mdigskirel rlengltqee lanrleltkg yisqlehnla spsmntlfsi levlgtdvsd
       61 ffsnqieeqv vfkksdfyek engdlkhnvs wivpnalkye mepiiieiqp ggksfeddph
      121 ageefgyvle gevtlvinkk kyivktgetf yylankehhl tnhtnkkakv lwistppmf
//
LOCUS       WP_235985252             563 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Spirosoma utsteinense].
ACCESSION   WP_235985252
VERSION     WP_235985252.1
KEYWORDS    RefSeq.
SOURCE      Spirosoma utsteinense
  ORGANISM  Spirosoma utsteinense
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cytophagaceae; Spirosoma.
REFERENCE   1  (residues 1 to 563)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Spirosoma utsteinense"
                     /db_xref="taxon:2585773"
     Protein         1..563
                     /product="AMP-binding protein"
                     /calculated_mol_wt=63357
     Region          36..545
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(182,185..190,192..193)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(185,324..325,345..350,418,430,433,445,537)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(185,226..227,272,274..275,278,324..325,345..350,418,
                     430,433,442..445,510)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(226,274..275,278,324,442..444,501,510)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
ORIGIN      
        1 mdtlvrmdhe pdtlieyfyk weqlkpdnvf lkqpvgdnfi dytwaeagrq arimatylns
       61 lglppksnig lvskncahwi iadlailisg hvsvpfyptl tgpqlrqvle hsecrvlfig
      121 kldgwdavkm svpagiqkia fpayiptapp vdtdavqwgd ilntnkplsg nplpekedlf
      181 tiiytsgttg npkgvmityd avtavmgktq eqmrydviea rffsylplch iaernvveat
      241 gigmggtiyf aesldtfarn lavarpthfl avpriwtkfq lgilakipqs kldtlmkipv
      301 vsslikrkir qglglndarl iitgaapmpi sliqwfrrlg iiiqeaygmt enlgavsmmp
      361 adklkdgtvg rvnegmeirt dpqtgevqtk srwnmlgyyr epeltaatir egwlytgdvg
      421 evdregflri tgrvkemyks pkgeyiapsq iefgfadnnh ieqvcvtgqq lpqpialivl
      481 setarqtdrq tvaqglqqtl dalnervhny ervrklivmk epwtvendlm tptmkmkrnv
      541 idarygtrye pwfgreeviv wed
//
LOCUS       WP_235985289             776 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 2 TIM barrel-domain containing protein
            [Spirosoma utsteinense].
ACCESSION   WP_235985289
VERSION     WP_235985289.1
KEYWORDS    RefSeq.
SOURCE      Spirosoma utsteinense
  ORGANISM  Spirosoma utsteinense
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cytophagaceae; Spirosoma.
REFERENCE   1  (residues 1 to 776)
  AUTHORS   Jacobson,R.H., Zhang,X.J., DuBose,R.F. and Matthews,B.W.
  TITLE     Three-dimensional structure of beta-galactosidase from E. coli
  JOURNAL   Nature 369 (6483), 761-766 (1994)
   PUBMED   8008071
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02836.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Spirosoma utsteinense"
                     /db_xref="taxon:2585773"
     Protein         1..776
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=85892
     Region          34..766
                     /region_name="GalB"
                     /note="beta-galactosidase GalB; NF041463"
                     /db_xref="CDD:469351"
ORIGIN      
        1 mehrrsscst ggkstrtfyq nlhwkssygl hrggvgwyrk tfildkgyqg kqtyitfdgv
       61 smdadiwlng hhlgnhpygy tpfsfnltdr lnpvgkpnvl vvraknlgkn srwyagsgiy
      121 rhvwlmalns vhtaidgnyv ttpsiapgta qvrientien eaaqtkvldi qvevvspsgq
      181 vvasqkqsis iaarstklsm lqvpvnsptl wtlekpvlys arvtllaggk tldqtttpfg
      241 irslqfdgqk gfllngnvvk lkggcihhdn gplgavaidr aeerkiellk kagynavrls
      301 hnpsssailn acdrlgmlvv tdafdmweke klgvkngyhq yfktwwkkdv daimlrdrnh
      361 paiimwgign eiweaadtsg hriakqlade vrrldptrav teamlylpqq ikfkweafap
      421 hldnldvdgy nyfiggkydp mqrdsatihr yesehakhpk klymatesyp saalenweaa
      481 etypfviggf swtamdyige aniggptlit ettkvpqglm slmlffkpes wpvynancgd
      541 ldlignrkaa syyqnvvwrn spiellvhrp lpdgmkears pwgfpdelks wtwpsqegkp
      601 mqvnvytrsk rvslelngrp iaeqvvpags itasfsvpyq pgtltargfd getemgsssl
      661 stvgkpvair liadrttina daqdlayvqv eivdekgqvv pvsddleisy elsgnatlag
      721 vgngnqadmt sfqqphkkvy qgrglaiirs nrqkgavtlt atasgmkagq vqitlk
//
LOCUS       WP_235985294             496 aa            linear   BCT 02-MAR-2025
DEFINITION  S41 family peptidase [Spirosoma utsteinense].
ACCESSION   WP_235985294
VERSION     WP_235985294.1
KEYWORDS    RefSeq.
SOURCE      Spirosoma utsteinense
  ORGANISM  Spirosoma utsteinense
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cytophagaceae; Spirosoma.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015531.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03572.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Spirosoma utsteinense"
                     /db_xref="taxon:2585773"
     Protein         1..496
                     /product="S41 family peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=53077
     Region          61..113
                     /region_name="Pept_S41_N"
                     /note="Peptidase S41 N-terminal domain; pfam18294"
                     /db_xref="CDD:436392"
     Region          152..>193
                     /region_name="PDZ_6"
                     /note="PDZ domain; pfam17820"
                     /db_xref="CDD:436067"
     Region          <231..444
                     /region_name="Peptidase_S41_CPP_like"
                     /note="C-terminal processing peptidase-like; serine
                     protease family S41; cd07561"
                     /db_xref="CDD:143477"
     Site            order(361,386)
                     /site_type="active"
                     /note="Catalytic dyad [active]"
                     /db_xref="CDD:143477"
ORIGIN      
        1 mtnyvvnkvi rgairpltig yamgqwvlla glivcltgck dqaaevtpls vadaankngv
       61 vdnwiltnmr dlyywndkip anpdttlape iffdsilnty dattnptgdr fswieasaad
      121 lqaslsgett ttgmeynlyl rssgsddiia qvlyvlpgsp aekagiqrgd iiskvngqll
      181 trtnyvdllf gstttftfgl asvsgnslvd tdlsktvtat vyqenpvfld svysvggktv
      241 gylvynqfvp gannsnaney daqldaifgd fkakgvnelv ldlrynpggy tsssanlasl
      301 igkgvgagkv yfreewntsi tpllqekygd sffvqnfltk aqniggnltr lfvlttdqta
      361 saseliingl rpymsvitig tttygknvgs ititddsgqi pwgiqpivfk sfnsagqsdy
      421 stgftptiev eepltllplg dtreallsta lgqlsgtaap aragvrqanp lagvgssiqr
      481 kagggrmvkt mkmlhw
//
LOCUS       WP_235985366              89 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF983 domain-containing protein [Spirosoma utsteinense].
ACCESSION   WP_235985366
VERSION     WP_235985366.1
KEYWORDS    RefSeq.
SOURCE      Spirosoma utsteinense
  ORGANISM  Spirosoma utsteinense
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cytophagaceae; Spirosoma.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017935.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06170.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Spirosoma utsteinense"
                     /db_xref="taxon:2585773"
     Protein         1..89
                     /product="DUF983 domain-containing protein"
                     /calculated_mol_wt=9812
     Region          5..77
                     /region_name="DUF983"
                     /note="Protein of unknown function (DUF983); cl02211"
                     /db_xref="CDD:470495"
ORIGIN      
        1 myefcphcgl ryevepgyfi gamyvsyais ggvalvlgfm lfylagdpeg wvyavvvapv
       61 miliapvnfr isrviwlhyv agikyvkgl
//
LOCUS       WP_235985379             751 aa            linear   BCT 02-MAR-2025
DEFINITION  VapE domain-containing protein [Spirosoma utsteinense].
ACCESSION   WP_235985379
VERSION     WP_235985379.1
KEYWORDS    RefSeq.
SOURCE      Spirosoma utsteinense
  ORGANISM  Spirosoma utsteinense
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cytophagaceae; Spirosoma.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017116.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05272.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Spirosoma utsteinense"
                     /db_xref="taxon:2585773"
     Protein         1..751
                     /product="VapE domain-containing protein"
                     /calculated_mol_wt=85494
     Region          74..190
                     /region_name="VirE_N"
                     /note="VirE N-terminal domain; cl07419"
                     /db_xref="CDD:447364"
     Region          214..724
                     /region_name="COG5545"
                     /note="Predicted P-loop ATPase and inactivated derivatives
                     [Mobilome: prophages, transposons]"
                     /db_xref="CDD:444288"
ORIGIN      
        1 mtkitieaql islyetswmt dalaeittre ffdgiaigrw akhvahvraa qclplpegkt
       61 seehakvikk eyykrktagn avtlagtfnt rksdaireys gliaadldhl gadlmrvfnl
      121 lkadpyvlav frsiggsglc vvfridtgkw lesfegikry lietygvvte fddsvkdvsr
      181 lryvshdpdi avnfkaqlfk kyvarekkap kpqafvhtdv dirfileqih araldltgsy
      241 eewyrigwal isqygeearg lfrevsgyns dydaeetdkk fkyllqtrpt qisigtfyyh
      301 cklagldimt pqtreivsva amskkqrisk asaldtvvsm tdadrataep iieqvyantv
      361 svdtqetlfd qlelflktny plrrnevtry iedengtglt evdfnsiwvh askslgekvs
      421 dkmvnklihs hfvksfnplk dffvehqdrr pvgvikalad tlettsgfee nafmpnyaef
      481 iirkwmlgii saifdehcpl vlvltgrpnt gktewfrrll prelhekffa etiwpvskdt
      541 dimmaeslis fndewkgdtv knpetlkgfa saerftlrep ygasnvkrrr lavmcgtsnp
      601 vnivkdpdnn rkifginvls infnaynvid ktdllmeayw aylagerhhl tnaevayias
      661 evkgfenhtl ereliekyya kpasitdaql csqvdalvyl qnmsgiknld knvitrefka
      721 lgfeyqgkpv yyapdgkvkr gfwtyksplv s
//
LOCUS       WP_235985469             171 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4126 family protein [Spirosoma utsteinense].
ACCESSION   WP_235985469
VERSION     WP_235985469.1
KEYWORDS    RefSeq.
SOURCE      Spirosoma utsteinense
  ORGANISM  Spirosoma utsteinense
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cytophagaceae; Spirosoma.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024937.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13548.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Spirosoma utsteinense"
                     /db_xref="taxon:2585773"
     Protein         1..171
                     /product="DUF4126 family protein"
                     /calculated_mol_wt=17601
     Region          2..156
                     /region_name="COG3918"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:443123"
ORIGIN      
        1 mmlttylnaf qigviagmra ltapalvshk lanthpdplv nskldflhss ttatilkvla
       61 ggeligdklp qspnrigasq lpvrilsgav sgaavseaeg esvpygalag algavassfa
      121 ffhlrhwlta dkglpdpaia liedalaigf gllvmrhvep vlheqepvaa a
//
LOCUS       WP_235985526             137 aa            linear   BCT 02-MAR-2025
DEFINITION  antitoxin Xre-like helix-turn-helix domain-containing protein
            [Spirosoma utsteinense].
ACCESSION   WP_235985526
VERSION     WP_235985526.1
KEYWORDS    RefSeq.
SOURCE      Spirosoma utsteinense
  ORGANISM  Spirosoma utsteinense
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cytophagaceae; Spirosoma.
REFERENCE   1  (residues 1 to 137)
  AUTHORS   Freire,D.M., Gutierrez,C., Garza-Garcia,A., Grabowska,A.D.,
            Sala,A.J., Ariyachaokun,K., Panikova,T., Beckham,K.S.H., Colom,A.,
            Pogenberg,V., Cianci,M., Tuukkanen,A., Boudehen,Y.M., Peixoto,A.,
            Botella,L., Svergun,D.I., Schnappinger,D., Schneider,T.R.,
            Genevaux,P., de Carvalho,L.P.S., Wilmanns,M., Parret,A.H.A. and
            Neyrolles,O.
  TITLE     An NAD+ Phosphorylase Toxin Triggers Mycobacterium tuberculosis
            Cell Death
  JOURNAL   Mol Cell 73 (6), 1282-1291 (2019)
   PUBMED   30792174
REFERENCE   2  (residues 1 to 137)
  AUTHORS   Skjerning,R.B., Senissar,M., Winther,K.S., Gerdes,K. and
            Brodersen,D.E.
  TITLE     The RES domain toxins of RES-Xre toxin-antitoxin modules induce
            cell stasis by degrading NAD+
  JOURNAL   Mol Microbiol 111 (1), 221-236 (2019)
   PUBMED   30315706
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042861.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20432.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Spirosoma utsteinense"
                     /db_xref="taxon:2585773"
     Protein         1..137
                     /product="antitoxin Xre-like helix-turn-helix
                     domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=14828
     Region          1..111
                     /region_name="COG5642"
                     /note="Uncharacterized conserved protein, DUF2384 family
                     [Function unknown]"
                     /db_xref="CDD:444366"
ORIGIN      
        1 mtalqlidrs rqgllgteag riagllgvtd kemvrllnqs tatfhrhaka arldastsek
       61 llllgrlagc gttifqnqgm fnrwlrrplr llgdrtsldl ldsptgvqli eiswgglntv
      121 ssanghhavs ypnrrap
//
LOCUS       WP_235985538            1661 aa            linear   BCT 02-MAR-2025
DEFINITION  putative Ig domain-containing protein [Spirosoma utsteinense].
ACCESSION   WP_235985538
VERSION     WP_235985538.1
KEYWORDS    RefSeq.
SOURCE      Spirosoma utsteinense
  ORGANISM  Spirosoma utsteinense
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cytophagaceae; Spirosoma.
REFERENCE   1  (residues 1 to 1661)
  AUTHORS   Bentley,S.D., Maiwald,M., Murphy,L.D., Pallen,M.J., Yeats,C.A.,
            Dover,L.G., Norbertczak,H.T., Besra,G.S., Quail,M.A., Harris,D.E.,
            von Herbay,A., Goble,A., Rutter,S., Squares,R., Squares,S.,
            Barrell,B.G., Parkhill,J. and Relman,D.A.
  TITLE     Sequencing and analysis of the genome of the Whipple's disease
            bacterium Tropheryma whipplei
  JOURNAL   Lancet 361 (9358), 637-644 (2003)
   PUBMED   12606174
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017183.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05345.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Spirosoma utsteinense"
                     /db_xref="taxon:2585773"
     Protein         1..1661
                     /product="putative Ig domain-containing protein"
                     /calculated_mol_wt=168650
     Region          30..1465
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          676..993
                     /region_name="COG2374"
                     /note="Predicted extracellular nuclease [General function
                     prediction only]"
                     /db_xref="CDD:441941"
     Region          <1184..1480
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
ORIGIN      
        1 mnqqlrktik lgawlmallc ahsgwaqllt ddftattlpy sltaqggwaa hsgagtntiq
       61 atapgltysg iataggsvgl ttagedvnrq ftqqtsgsvy asflinvaaa qatgdyflhl
      121 gpstigttfi grvfvksttg gfllglskgt daagpvystt vyslnttylv vlkytfvaga
      181 tndlvdlfiq ptpgqaeptp svsttsvvad lanagsialr qgtaanaptl rvdklqigts
      241 wssvtsastp vaalststta ltgfvagqgt vsntqtytlt gsdlsadpvs vsatagiels
      301 tdnssftpml slptsasals qviyarltaa tptgafsgti thtanatlva pvtvsgqina
      361 pnapvltaap ttltgyttae gtpsavqayt ltaanltdgi svsastgvdv sqtpgsgfga
      421 tltlpsstts avvyarlsgt aggavsgtit nrsgsltavv tvsgtvsttg atpistarvg
      481 igqsftvagr vtvtnqlgar qlyiqdatgg iviysgpsgt dlsglvqlgd svrasgpvsv
      541 fsgyteitas vntftvvtgv anrmvmpvai tpdqlpayqg rlvsvadati tpatptftgg
      601 tsytitaggq sgtlrisans plagagrptn pvsvtgiadr fvsgattpgt nglqlqpril
      661 advpgttpas dltctvgssp algsdktldi vawnfeffga dagtiscpsg ttltydnfgp
      721 tnellqqtna ttvltklnad iiaaeeisdi nrldaavkam pgsysyvcsd kfsyyfqnec
      781 dqtpsggtvf gptrlaqkvc viyntatvtp vlaetkalla dkynypsdnn wssgrlpflf
      841 vanvtidgkt ekihvvalha ksgsatadyn rrkqdiidlk aeldtryada kvvilgdynd
      901 klngsiatgk essyqsfvtd vtnysaitlp lenqgcstfn ssasfidhii asselakayv
      961 snsayvlqpf sipnygntts dhnpvvarfd lsqfvapvta ltlvasatpa silttgtttl
     1021 satvsggtmp ytytftgpgs itatgntavv sglttgvqtf tvvaqdatap tsqtvsgtvs
     1081 vtvteavaap fsitgvtavs cvtlsvgqrq vsftprytgl sgqpisfsvv nelspttatg
     1141 pytltlytdn ptitlkatqt gtageasfty nwlaacnggg tppvnqapvv aagipaqsat
     1201 vgqaftyvia anafsdpngd altysvsglp aglsftapat isgtpsvsgv stvtvratdp
     1261 gslsvstsfv ltvssagtta pfsitgvttv scvtitagqr qvsftpryag lsgaavtfsv
     1321 anelspttaa gpytlnlytd npsitlkatq tgtvgeasfv ynwlaacngg gtppanqapv
     1381 vaagipaqsa tvgqaftymi aanafsdpng daltysvsgl paglsftapa tisgtpsvsg
     1441 vstvtvratd pgslsastsf vltvssasvv vpggpfsitg vttvscltvt agqrqvsfvp
     1501 qyaglsgsav sfsvvnelsp ttaagpytln lytdnptitl katqtgtage asftynwlta
     1561 ctggsgrlgv rpsveselnv rvlgnpalng qvwvevsgaa gqplqltlid lrgqtigthq
     1621 vrqagtlerh tfdvsrqtmg qlllqvntpt klqtvkvlkv d
//
LOCUS       WP_235985541            1006 aa            linear   BCT 02-MAR-2025
DEFINITION  DPP IV N-terminal domain-containing protein [Spirosoma
            utsteinense].
ACCESSION   WP_235985541
VERSION     WP_235985541.1
KEYWORDS    RefSeq.
SOURCE      Spirosoma utsteinense
  ORGANISM  Spirosoma utsteinense
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cytophagaceae; Spirosoma.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013123.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00930.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Spirosoma utsteinense"
                     /db_xref="taxon:2585773"
     Protein         1..1006
                     /product="DPP IV N-terminal domain-containing protein"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=109478
     Region          53..>528
                     /region_name="COG4946"
                     /note="Uncharacterized N-terminal domain of tricorn
                     protease, contains WD40 repeats [Function unknown]"
                     /db_xref="CDD:443973"
     Region          604..996
                     /region_name="HutI"
                     /note="Imidazolonepropionase or related amidohydrolase
                     [Secondary metabolites biosynthesis, transport and
                     catabolism]; COG1228"
                     /db_xref="CDD:440841"
ORIGIN      
        1 mknitlpsat iaywligllq vmqpqlsrag nadslrvtvt egtnmaadls pdkkqiamdl
       61 qgtiwlvpat gglakpitda lgdcrqpsws pdgsqiafha fwdgryhlwt vsktggkprq
      121 lttgiyddre phwspdskri vfasdrggny diwqltvadg kltqlttdsg ndfnpsfspn
      181 greiafvsdr tdapglyvit pgsaeklisa skaklagpaw qpdgshlvyn altkaqsgle
      241 taaltdskta wlteaaedvf pfraswlssd eylytadgll krrkigsrsa qtipfqavia
      301 lprttykrkt ydfnstkpqa vlgikgpvis pdgkqiafaa lgdiwlltkg nkipkaltng
      361 pamdveptws pdgtklayvs drngnmdvwi rdlktgqekv ladmaedlnf ptwspdgskv
      421 afyqgdprna wgrstlytad vtytadatap kttkvheslf vpsqaswsad grtiavsalh
      481 pyssryregv sevllisldg kndryvspap ahslgtrskn gpvwspdgsr mayildgqlw
      541 ittvssdgtp tgtpvqltte qaeaptwtgd sksllflatn llkqvtvsdk qtetipmtln
      601 wqisqpnqsl vihagrlfdg ksgtyrqnvd ilvdnnrika iephragrtg tlidastktv
      661 mpglfemhth qhsmvgekig rlwlsygits vrepgadpyd alerkeswas gvrpgprqff
      721 tggltdgtri yygaatsins deqldrelnr avqlgydlik tyvrmpdamq qrittfahah
      781 gipvssheif pamrydvdav ehiggtsrrg yspkitamnr syqdviqlla ksgmnitpta
      841 slqggffvaa skdpafyenr qykafysedy snalqagaaq mtkispgyla nysnlqksvk
      901 aliaagahvt tgtdspfvpy glslhtelqt fvdaglspye alrsatlwaa etvgaskdlg
      961 siepgkladl vivngdpltn ikdalnveqv irngavlsie tllkqp
//
LOCUS       WP_235985565             463 aa            linear   BCT 02-MAR-2025
DEFINITION  arginine deiminase family protein [Spirosoma utsteinense].
ACCESSION   WP_235985565
VERSION     WP_235985565.1
KEYWORDS    RefSeq.
SOURCE      Spirosoma utsteinense
  ORGANISM  Spirosoma utsteinense
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cytophagaceae; Spirosoma.
REFERENCE   1  (residues 1 to 463)
  AUTHORS   Shirai,H. and Mizuguchi,K.
  TITLE     Prediction of the structure and function of AstA and AstB, the
            first two enzymes of the arginine succinyltransferase pathway of
            arginine catabolism
  JOURNAL   FEBS Lett 555 (3), 505-510 (2003)
   PUBMED   14675764
REFERENCE   2  (residues 1 to 463)
  AUTHORS   Shirai,H., Blundell,T.L. and Mizuguchi,K.
  TITLE     A novel superfamily of enzymes that catalyze the modification of
            guanidino groups
  JOURNAL   Trends Biochem Sci 26 (8), 465-468 (2001)
   PUBMED   11504612
REFERENCE   3  (residues 1 to 463)
  AUTHORS   D'Hooghe,I., Vander Wauven,C., Michiels,J., Tricot,C., de Wilde,P.,
            Vanderleyden,J. and Stalon,V.
  TITLE     The arginine deiminase pathway in Rhizobium etli: DNA sequence
            analysis and functional study of the arcABC genes
  JOURNAL   J Bacteriol 179 (23), 7403-7409 (1997)
   PUBMED   9393705
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014344.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02274.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Spirosoma utsteinense"
                     /db_xref="taxon:2585773"
     Protein         1..463
                     /product="arginine deiminase family protein"
                     /calculated_mol_wt=52441
     Region          2..463
                     /region_name="ArcA"
                     /note="Arginine deiminase [Amino acid transport and
                     metabolism]; COG2235"
                     /db_xref="CDD:441836"
ORIGIN      
        1 mlihspdrgl gkvvpskaqd wlfedivhln mmrrdeydyy vkillyfldp dkvrgkiasl
       61 gpdsdrnffk pdhneyfrss kvvdvqslls eiladevirt rliaaicgie rtsfrtqqkl
      121 nefdpvelak imisgslpdq amlfaplpnf iftrdigivi ndhillnkpa klartreall
      181 mqyiffnhpl fadyqdkiie ipdnehafll pdadansdvt rstleggdvm miakrhlivg
      241 vserttlyaa qqvmrlvfak slvdtvtivk ipkkrdymhi dtvftqakrn vwvllgslar
      301 tgdeakkrdv ihffapkdvs edlkilqfkk gseqkpieie nledllvgis kddlgvtepv
      361 qfiysgnnef pfgareqwtd scnllalkdg vvvgydrnqk ttdafqaagf dvvraadlld
      421 rfergesspe tientfimlp saelsrargg shcmslpllr eel
//
LOCUS       WP_235985382             203 aa            linear   BCT 02-MAR-2025
DEFINITION  laminin B domain-containing protein [Spirosoma utsteinense].
ACCESSION   WP_235985382
VERSION     WP_235985382.1
KEYWORDS    RefSeq.
SOURCE      Spirosoma utsteinense
  ORGANISM  Spirosoma utsteinense
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cytophagaceae; Spirosoma.
REFERENCE   1  (residues 1 to 203)
  AUTHORS   Vuolteenaho,R., Chow,L.T. and Tryggvason,K.
  TITLE     Structure of the human laminin B1 chain gene
  JOURNAL   J Biol Chem 265 (26), 15611-15616 (1990)
   PUBMED   1975589
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012282.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00052.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Spirosoma utsteinense"
                     /db_xref="taxon:2585773"
     Protein         1..203
                     /product="laminin B domain-containing protein"
                     /calculated_mol_wt=22849
     Region          89..199
                     /region_name="Laminin_B"
                     /note="Laminin B (Domain IV); cl02548"
                     /db_xref="CDD:470610"
ORIGIN      
        1 mamfsklekf afykwllpig vagamltgcs eyneqslpwp yvnrfdvndq gwrvnviqpe
       61 vgsapvhska ggnrdgyiya fdqfttfwyf iasqafvtea rksynrtlrf dlkqlatdap
      121 ldgndilltn gidtlryntn hhpgttwtsy svrmnelsgw kkgsspatka diqtvlqnlt
      181 dlrirgeyrt gadtcgldna miy
//
LOCUS       WP_235985573             174 aa            linear   BCT 02-MAR-2025
DEFINITION  DDE-type integrase/transposase/recombinase [Spirosoma utsteinense].
ACCESSION   WP_235985573
VERSION     WP_235985573.1
KEYWORDS    RefSeq.
SOURCE      Spirosoma utsteinense
  ORGANISM  Spirosoma utsteinense
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cytophagaceae; Spirosoma.
REFERENCE   1  (residues 1 to 174)
  AUTHORS   Dyda,F., Hickman,A.B., Jenkins,T.M., Engelman,A., Craigie,R. and
            Davies,D.R.
  TITLE     Crystal structure of the catalytic domain of HIV-1 integrase:
            similarity to other polynucleotidyl transferases
  JOURNAL   Science 266 (5193), 1981-1986 (1994)
   PUBMED   7801124
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012870.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00665.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Spirosoma utsteinense"
                     /db_xref="taxon:2585773"
     Protein         1..174
                     /product="DDE-type integrase/transposase/recombinase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=20730
     Region          <5..155
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 mrkpclcwdi kyvwvqgerr nyyllsvidv ysrkildwlf qssvrqidli nlfrrinrsh
       61 elkgvilrnd ngsqfiahsv rnflksseik qefthvatpe ensyieafhs ilehdviern
      121 vfdsyyeakg mlgryfshyn qqrlhrsigf vtpqqkweea qviydttfse nlss
//
LOCUS       WP_235985590              80 aa            linear   BCT 02-MAR-2025
DEFINITION  pyridoxal-phosphate dependent enzyme [Spirosoma utsteinense].
ACCESSION   WP_235985590
VERSION     WP_235985590.1
KEYWORDS    RefSeq.
SOURCE      Spirosoma utsteinense
  ORGANISM  Spirosoma utsteinense
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cytophagaceae; Spirosoma.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012512.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00291.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Spirosoma utsteinense"
                     /db_xref="taxon:2585773"
     Protein         1..80
                     /product="pyridoxal-phosphate dependent enzyme"
                     /calculated_mol_wt=8392
     Region          <2..74
                     /region_name="Trp-synth-beta_II"
                     /note="Tryptophan synthase beta superfamily (fold type
                     II); this family of pyridoxal phosphate (PLP)-dependent
                     enzymes catalyzes beta-replacement and beta-elimination
                     reactions. This CD corresponds to
                     aminocyclopropane-1-carboxylate deaminase (ACCD),
                     tryptophan...; cl00342"
                     /db_xref="CDD:444852"
ORIGIN      
        1 mlqvlqesgg tvlavseeem lggvreigra egifvapegg aiwaatkrll aqgwiapdey
       61 vlllntgngq kyldhikgkg
//
LOCUS       WP_235985603              86 aa            linear   BCT 02-MAR-2025
DEFINITION  IS3 family transposase [Spirosoma utsteinense].
ACCESSION   WP_235985603
VERSION     WP_235985603.1
KEYWORDS    RefSeq.
SOURCE      Spirosoma utsteinense
  ORGANISM  Spirosoma utsteinense
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cytophagaceae; Spirosoma.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024673.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13276.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Spirosoma utsteinense"
                     /db_xref="taxon:2585773"
     Protein         1..86
                     /product="IS3 family transposase"
                     /calculated_mol_wt=10165
     Region          <10..>84
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
     Region          <33..>69
                     /region_name="transpos_IS3"
                     /note="IS3 family transposase; NF033516"
                     /db_xref="CDD:468052"
ORIGIN      
        1 mkldgswavn qlvvssirql ldvefnalsy eyithelkke ylvnkkkvyr lmkehnlllg
       61 kvirptgkre fvkfrrieat rpleyl
//
LOCUS       WP_235985608              86 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-binding dehydrogenase [Spirosoma utsteinense].
ACCESSION   WP_235985608
VERSION     WP_235985608.1
KEYWORDS    RefSeq.
SOURCE      Spirosoma utsteinense
  ORGANISM  Spirosoma utsteinense
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cytophagaceae; Spirosoma.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024989.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13602.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Spirosoma utsteinense"
                     /db_xref="taxon:2585773"
     Protein         1..86
                     /product="zinc-binding dehydrogenase"
                     /calculated_mol_wt=9597
     Region          <27..80
                     /region_name="ADH_zinc_N_2"
                     /note="Zinc-binding dehydrogenase; pfam13602"
                     /db_xref="CDD:433341"
ORIGIN      
        1 mvsvntdfpf nddvlqalas qgatgelaan qprqewlrem aqlvdegrvr vqirqvfple
       61 qvaqahqese vrrgrgklvl evrkeg
//
LOCUS       WP_235985625             382 aa            linear   BCT 02-MAR-2025
DEFINITION  YjbH domain-containing protein [Spirosoma utsteinense].
ACCESSION   WP_235985625
VERSION     WP_235985625.1
KEYWORDS    RefSeq.
SOURCE      Spirosoma utsteinense
  ORGANISM  Spirosoma utsteinense
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cytophagaceae; Spirosoma.
REFERENCE   1  (residues 1 to 382)
  AUTHORS   Sathiyamoorthy,K., Mills,E., Franzmann,T.M., Rosenshine,I. and
            Saper,M.A.
  TITLE     The crystal structure of Escherichia coli group 4 capsule protein
            GfcC reveals a domain organization resembling that of Wza
  JOURNAL   Biochemistry 50 (24), 5465-5476 (2011)
   PUBMED   21449614
REFERENCE   2  (residues 1 to 382)
  AUTHORS   Ferrieres,L., Aslam,S.N., Cooper,R.M. and Clarke,D.J.
  TITLE     The yjbEFGH locus in Escherichia coli K-12 is an operon encoding
            proteins involved in exopolysaccharide production
  JOURNAL   Microbiology (Reading) 153 (Pt 4), 1070-1080 (2007)
   PUBMED   17379715
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017857.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06082.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Spirosoma utsteinense"
                     /db_xref="taxon:2585773"
     Protein         1..382
                     /product="YjbH domain-containing protein"
                     /calculated_mol_wt=43668
     Region          <83..307
                     /region_name="YjbH"
                     /note="Exopolysaccharide biosynthesis protein YbjH;
                     pfam06082"
                     /db_xref="CDD:428757"
ORIGIN      
        1 mkrggermrr aiqygwwall glygllamph esdaqprngl qpfenlsvds aqhrvsyeqr
       61 lyrnpmtgll klaallekqg inefvplvqg ipiasyrldn tltttrlsrq errawanahp
      121 fsgraykfdi rlqpefiaqf gyrertvesk tnllvqsqly vsrglvlnwg vlvplinhld
      181 nqalnvrlap tflnqflalg gsdflslsag lfyndqygin gqyrhadlng nwsygleasl
      241 tgfyyypeng fyhramktvm vladvayrfp rqdvtlkasg gqflfndqgv rfdlirqlgn
      301 vevgfyatkt gnggtggfsf aipippgriv qtphvrvrss eefrweyays rgynigtryr
      361 lgyqldallr qyhhsylqnq yr
//
LOCUS       WP_235985626             265 aa            linear   BCT 02-MAR-2025
DEFINITION  YjbH domain-containing protein [Spirosoma utsteinense].
ACCESSION   WP_235985626
VERSION     WP_235985626.1
KEYWORDS    RefSeq.
SOURCE      Spirosoma utsteinense
  ORGANISM  Spirosoma utsteinense
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cytophagaceae; Spirosoma.
REFERENCE   1  (residues 1 to 265)
  AUTHORS   Sathiyamoorthy,K., Mills,E., Franzmann,T.M., Rosenshine,I. and
            Saper,M.A.
  TITLE     The crystal structure of Escherichia coli group 4 capsule protein
            GfcC reveals a domain organization resembling that of Wza
  JOURNAL   Biochemistry 50 (24), 5465-5476 (2011)
   PUBMED   21449614
REFERENCE   2  (residues 1 to 265)
  AUTHORS   Ferrieres,L., Aslam,S.N., Cooper,R.M. and Clarke,D.J.
  TITLE     The yjbEFGH locus in Escherichia coli K-12 is an operon encoding
            proteins involved in exopolysaccharide production
  JOURNAL   Microbiology (Reading) 153 (Pt 4), 1070-1080 (2007)
   PUBMED   17379715
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017857.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06082.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Spirosoma utsteinense"
                     /db_xref="taxon:2585773"
     Protein         1..265
                     /product="YjbH domain-containing protein"
                     /calculated_mol_wt=28774
     Region          26..>262
                     /region_name="YjbH"
                     /note="Exopolysaccharide biosynthesis protein YbjH;
                     pfam06082"
                     /db_xref="CDD:428757"
ORIGIN      
        1 mrsllgmmll giglparlyg qvnvsgkagl lyipsaelte dgtfsigyty nppdyafrfn
       61 kknsesicfv nlvllprlev nlnllmpngp igfsgrgigd rqvdlkyvvl tegkirpsva
      121 vilsapfgid nslitnalva trhvvlsksv tavitagmgs pysiyrasvk ndrnedifsg
      181 yslrdkrklp yhylsgpfgg vkltvvqtgg lmvewdsqhl nvgayarlfk rwtiqaglln
      241 gdqltvgtsy avpllrtpkr tgtks
//
LOCUS       WP_235985527             153 aa            linear   BCT 02-MAR-2025
DEFINITION  S1/P1 nuclease [Spirosoma utsteinense].
ACCESSION   WP_235985527
VERSION     WP_235985527.1
KEYWORDS    RefSeq.
SOURCE      Spirosoma utsteinense
  ORGANISM  Spirosoma utsteinense
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cytophagaceae; Spirosoma.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Romier,C., Dominguez,R., Lahm,A., Dahl,O. and Suck,D.
  TITLE     Recognition of single-stranded DNA by nuclease P1: high resolution
            crystal structures of complexes with substrate analogs
  JOURNAL   Proteins 32 (4), 414-424 (1998)
   PUBMED   9726413
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014336.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02265.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Spirosoma utsteinense"
                     /db_xref="taxon:2585773"
     Protein         1..153
                     /product="S1/P1 nuclease"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_process="GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /calculated_mol_wt=16845
     Region          <25..147
                     /region_name="ZnPC_S1P1"
                     /note="Zinc dependent phospholipase C/S1-P1 nuclease;
                     cl16915"
                     /db_xref="CDD:450122"
ORIGIN      
        1 mvtpfltvsy nlpanpnlrl epsyaygdrg gnlfkikvmm ssqtinlhsf wdgmllgsdd
       61 fqstrnlavq irqaesrdql pqlgktsitd wskesfqlaq dtayrnntlq sgtdqegavl
      121 padyvatvkp iaqrqvalag yrladelmad lgk
//
LOCUS       WP_235985667              85 aa            linear   BCT 02-MAR-2025
DEFINITION  IS3 family transposase, partial [Spirosoma utsteinense].
ACCESSION   WP_235985667
VERSION     WP_235985667.1
KEYWORDS    RefSeq.
SOURCE      Spirosoma utsteinense
  ORGANISM  Spirosoma utsteinense
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cytophagaceae; Spirosoma.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024729.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13333.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Spirosoma utsteinense"
                     /db_xref="taxon:2585773"
     Protein         <1..85
                     /product="IS3 family transposase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <38..72
                     /region_name="transpos_IS3"
                     /note="IS3 family transposase; NF033516"
                     /db_xref="CDD:468052"
ORIGIN      
        1 lrvhaiffgw laafsqhsdh vatnqtntpn iipqhllsve darteifeyi emyynrvrrh
       61 sslgykgpeq feseyytkha nsvcr
//
LOCUS       WP_235985674             276 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Spirosoma utsteinense].
ACCESSION   WP_235985674
VERSION     WP_235985674.1
KEYWORDS    RefSeq.
SOURCE      Spirosoma utsteinense
  ORGANISM  Spirosoma utsteinense
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cytophagaceae; Spirosoma.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040192.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19078.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Spirosoma utsteinense"
                     /db_xref="taxon:2585773"
     Protein         <1..>276
                     /product="Ig-like domain-containing protein"
     Region          43..>245
                     /region_name="Chi1"
                     /note="Chitinase [Carbohydrate transport and metabolism];
                     COG3469"
                     /db_xref="CDD:442692"
     Region          167..263
                     /region_name="Big_12"
                     /note="Bacterial Ig-like domain; pfam19078"
                     /db_xref="CDD:436946"
ORIGIN      
        1 vdspgtlavd lannrilvas vrnnlpriaa islsapytvt tfltpapvng atsstlagia
       61 ipgapaptti ssinrgstnp snagsvnytv ifaasvtglt isnfdlvtsg vsgatinsls
      121 gsgttytvsv ntgsgsgtlt lrllnatgls psisttlpft getyttdkta piptitssag
      181 nptttspipf tvtfsesvtg fvagdvtvtn gtlsgfsgsg ttytfnvtps angtvtvnvp
      241 anvaqdaagn gntaaasqft ityaqpltaa pvviap
//
LOCUS       WP_235985774             529 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Mucilaginibacter segetis].
ACCESSION   WP_235985774
VERSION     WP_235985774.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter segetis
  ORGANISM  Mucilaginibacter segetis
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
REFERENCE   1  (residues 1 to 529)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Mucilaginibacter segetis"
                     /db_xref="taxon:2793071"
     Protein         1..529
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=58707
     Region          289..508
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mktyptlfps fgikktfgll mlaafclnnt rsfaqskdpv ieniikeetd nshletlahe
       61 lfdgigprlv gtpqmeqagk walakyknwg idaryekwge wrgwergish idmvyprvks
      121 legtqlawsp smkkpvtaev ivlpdladsv afqkwlpavk gkfvmismdq ptgrpddnwk
      181 eyattesfdk mkqarsaqte awrkrisntg yttrtlpval enagaagilt nywsagfgvd
      241 kifaaytkkv ptvdialedy gmlfrlaesg dkpritmqte skelgvvptf niigeikgte
      301 kpdeyvmlsa hfdswdggtg atdngtgtlt mmeamrilkk vypnpkrtil vghwgseeeg
      361 lngsrafved hpeivanlqa lfnqdngtgr vvnisgqgfl nahdylgrwl sqvpdnireq
      421 iktnfpgtpg gggsdfasfv aagapgfsls stswaygnyt whtnrdtydk vvfddvrnna
      481 iltailvyma cedpakasre ksvlptdsrt gepmkwpeqr kpnrhggld
//
LOCUS       WP_235985627              65 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5712 family protein [Spirosoma utsteinense].
ACCESSION   WP_235985627
VERSION     WP_235985627.1
KEYWORDS    RefSeq.
SOURCE      Spirosoma utsteinense
  ORGANISM  Spirosoma utsteinense
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cytophagaceae; Spirosoma.
REFERENCE   1  (residues 1 to 65)
  AUTHORS   Franco,A.A., Cheng,R.K., Chung,G.T., Wu,S., Oh,H.B. and Sears,C.L.
  TITLE     Molecular evolution of the pathogenicity island of enterotoxigenic
            Bacteroides fragilis strains
  JOURNAL   J Bacteriol 181 (21), 6623-6633 (1999)
   PUBMED   10542162
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040155.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18976.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Spirosoma utsteinense"
                     /db_xref="taxon:2585773"
     Protein         1..65
                     /product="DUF5712 family protein"
                     /calculated_mol_wt=7086
     Region          16..>65
                     /region_name="DUF5712"
                     /note="Family of unknown function (DUF5712); cl40975"
                     /db_xref="CDD:477484"
ORIGIN      
        1 mmtkigagga gscgglveyl ekenklkpeq qaefwfsqsr eqlaghevva qidhnkrnlg
       61 redak
//
LOCUS       WP_235985857             369 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF892 family protein [Mucilaginibacter segetis].
ACCESSION   WP_235985857
VERSION     WP_235985857.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter segetis
  ORGANISM  Mucilaginibacter segetis
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
REFERENCE   1  (residues 1 to 369)
  AUTHORS   Hindupur,A., Liu,D., Zhao,Y., Bellamy,H.D., White,M.A. and Fox,R.O.
  TITLE     The crystal structure of the E. coli stress protein YciF
  JOURNAL   Protein Sci 15 (11), 2605-2611 (2006)
   PUBMED   17001035
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017758.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05974.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Mucilaginibacter segetis"
                     /db_xref="taxon:2793071"
     Protein         1..369
                     /product="DUF892 family protein"
                     /calculated_mol_wt=40905
     Region          7..149
                     /region_name="Ferritin_like"
                     /note="Ferritin-like superfamily of diiron-containing
                     four-helix-bundle proteins; cl00264"
                     /db_xref="CDD:469698"
     Region          <154..198
                     /region_name="COG5406"
                     /note="Nucleosome binding factor SPN, SPT16 subunit
                     [Transcription, Replication, recombination and repair,
                     Chromatin structure and dynamics]"
                     /db_xref="CDD:227693"
     Region          203..365
                     /region_name="YciE"
                     /note="Ferritin-like metal-binding protein YciE [Inorganic
                     ion transport and metabolism]; COG3685"
                     /db_xref="CDD:442901"
ORIGIN      
        1 meiseksiev indlieinnd rvkgfekavs elqeqnntal nflfnklage srdnaielss
       61 lvqqsgyepa dgtsasgtlh rawidikntf tgsdleailn ecergedaik sayrtaldpe
      121 nglspdivqv lqtqqmsine ghdlikslrd qiasfddeen divdedssyd eplneydsed
      181 eyetegfdee eawqdepstg tgnsklmeff vnelkdllwa ekelvdtlpd maeaattvel
      241 knafnnhlae tenhvtrleq ifsilglepd ttkcdamagi vdegdeiisd teegtaqrdv
      301 glifagqkae hyeiasyggm vslaktlgyy dvaeilnetl eeektadall teiaenhvny
      361 dastepled
//
LOCUS       WP_235985868             826 aa            linear   BCT 02-MAR-2025
DEFINITION  SLBB domain-containing protein [Mucilaginibacter segetis].
ACCESSION   WP_235985868
VERSION     WP_235985868.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter segetis
  ORGANISM  Mucilaginibacter segetis
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
REFERENCE   1  (residues 1 to 826)
  AUTHORS   Burroughs,A.M., Balaji,S., Iyer,L.M. and Aravind,L.
  TITLE     A novel superfamily containing the beta-grasp fold involved in
            binding diverse soluble ligands
  JOURNAL   Biol Direct 2, 4 (2007)
   PUBMED   17250770
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022007.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10531.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Mucilaginibacter segetis"
                     /db_xref="taxon:2793071"
     Protein         1..826
                     /product="SLBB domain-containing protein"
                     /calculated_mol_wt=90524
     Region          152..321
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          320..>358
                     /region_name="SLBB"
                     /note="SLBB domain; pfam10531"
                     /db_xref="CDD:463136"
     Region          403..>438
                     /region_name="SLBB"
                     /note="SLBB domain; pfam10531"
                     /db_xref="CDD:463136"
     Region          <493..580
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          <558..719
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
ORIGIN      
        1 mknlknifil ltaicmsgvf apaaaqttpq nlstvnvnel sdaqlmklmq qaqssglsde
       61 qlaqqlqarg lsaeqlqqlq qrisslrksn atannnntdq nlsvarglny tpdstgtprr
      121 stdianalip hifgadlfrn snvtfepnlk latpvnyilg pddqlninvy gnslvnwkld
      181 vspegninip gvgilnvsgk tieqatasik sklaannyav grgtsvqvtl gnirsikvim
      241 vgevvkpgty tlpslatvfn alyaaggpnn ngtfrqieii rnnriirrld vydflvkgdq
      301 kdniglqdqd iirvptyrtr vemvgevknp alfevlpget lqdvirfagg ftdqaytari
      361 kvsqisdqqr ritdvlesdy knyiplrgdk ytverildry enrvtingav frpgeyelqk
      421 gltvsqlikn aaglkedaft grgsitrlks dnttelisfd vngvlnktap divlqredvv
      481 tissifdlrd eykvtikgev rnvgefayae nmsvedlilk aggftegasp krievarrid
      541 dsnpnsrsss laevfnidvd aqlkkgqanf vlkpfdivsv yslpgyekqs tvkiegevly
      601 pgyytikkkn ekisdiiera ggltasadvd ggtlkrdnfa ilgvnknkid ttaieqervs
      661 kldrlskvns dstnvsnfqp rnnfvgidlk kilekpgssi dlimedndvi ripkqqqlvr
      721 vngevlypsa vvysksksfk dyilnaggys pdalkrgayv vypngtvkgt gkflffnvhp
      781 svkpgseifv trkpdkrgis atevigittg laslgaiilg iinlsk
//
LOCUS       WP_235985908             169 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2726 domain-containing protein [Acinetobacter baretiae].
ACCESSION   WP_235985908
VERSION     WP_235985908.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baretiae
  ORGANISM  Acinetobacter baretiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022337.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10881.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Acinetobacter baretiae"
                     /db_xref="taxon:2605383"
     Protein         1..169
                     /product="DUF2726 domain-containing protein"
                     /calculated_mol_wt=19087
     Region          63..153
                     /region_name="PDDEXK_nuclease-like"
                     /note="PDDEXK family nucleases; cl40440"
                     /db_xref="CDD:477358"
ORIGIN      
        1 mnvlkailmf vggifgalil knqknksent dvtktdelks gkipldqvik gkirksrpit
       61 mneqpmfkkl retlepeyvv laqvsfgail wtrsqairnr fnrkivdfvv cdqafnvvav
      121 ielddashkg neqkdierdm llneagitvf rytftpessk ilkdiqsvt
//
LOCUS       WP_235985944             106 aa            linear   BCT 02-MAR-2025
DEFINITION  Arc family DNA-binding protein [Acinetobacter baretiae].
ACCESSION   WP_235985944
VERSION     WP_235985944.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baretiae
  ORGANISM  Acinetobacter baretiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter.
REFERENCE   1  (residues 1 to 106)
  AUTHORS   Raumann,B.E., Rould,M.A., Pabo,C.O. and Sauer,R.T.
  TITLE     DNA recognition by beta-sheets in the Arc repressor-operator
            crystal structure
  JOURNAL   Nature 367 (6465), 754-757 (1994)
   PUBMED   8107872
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015807.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03869.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Acinetobacter baretiae"
                     /db_xref="taxon:2605383"
     Protein         1..106
                     /product="Arc family DNA-binding protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=12294
     Region          13..57
                     /region_name="Arc"
                     /note="Arc-like DNA binding domain; cl46767"
                     /db_xref="CDD:481107"
ORIGIN      
        1 mllisynfef madiqfnlri pselkeqiml sakhnnrsin seaqsrleqs feydsalpti
       61 fkdqvinsld slkniekfls iiknlqeqve kqnqllekls eteksk
//
LOCUS       WP_235985958             720 aa            linear   BCT 02-MAR-2025
DEFINITION  Mu transposase C-terminal domain-containing protein [Acinetobacter
            baretiae].
ACCESSION   WP_235985958
VERSION     WP_235985958.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baretiae
  ORGANISM  Acinetobacter baretiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter.
REFERENCE   1  (residues 1 to 720)
  AUTHORS   Rice,P. and Mizuuchi,K.
  TITLE     Structure of the bacteriophage Mu transposase core: a common
            structural motif for DNA transposition and retroviral integration
  JOURNAL   Cell 82 (2), 209-220 (1995)
   PUBMED   7628012
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020859.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09299.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Acinetobacter baretiae"
                     /db_xref="taxon:2605383"
     Protein         1..720
                     /product="Mu transposase C-terminal domain-containing
                     protein"
                     /calculated_mol_wt=82212
     Region          <281..486
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
     Region          505..563
                     /region_name="Mu-transpos_C"
                     /note="Mu transposase, C-terminal; pfam09299"
                     /db_xref="CDD:430512"
ORIGIN      
        1 meqlnkewys avelselnla ifpstrfgiq kkftkeqrps rvvdgqrggv sgkmteyllt
       61 leeidvlqkt qlvkhivehs naelakkhsi ignpvskalt dcqrevaahk livvrylqqq
      121 iragvkktva ieqlierant qnlpceilea ihkanakags krtvsrrslf dwmktveeae
      181 qhdlelfsvl apkarrqqdv pswvipflkl wqqpqkptit acleqlpnyl ngkpcpsysq
      241 ayrflkqkmg nvemmkgrig kkelrnlqpf irrdtsnlmp tdvytadghc fdaevahpih
      301 grpfrpeits iidvatrrvv gwsislsess wcvldairms attcgipaif yvdngsgykn
      361 dllnarghgv larlhteish alpynsqakg iiershqtlw vkaaknlpty igkdmdreag
      421 havhkatrne ikqfsvskal mnwsdfiaya sqvvdgynns phrglkrivd vntdkkryqs
      481 pmeawheavv ggavidivkd wdaedlfrpy eerkvrrgei dlfgnryfsa sleqfhgdtv
      541 lvgydihcad kitvrtlegk lichalwnan krdyfpkski eqavekraqg rlrrlavhqd
      601 ealaemspka viehiedknm ivfdqsrrek lmseldalpi qteqyqpffk ttsmvqeqpl
      661 kassddkvmr wialdqqvkg geilekqded fwklfqlskk feqlsmsndt lkdylacrqa
//
LOCUS       WP_235986037             161 aa            linear   BCT 02-MAR-2025
DEFINITION  minor capsid protein [Clostridium vitabionis].
ACCESSION   WP_235986037
VERSION     WP_235986037.1
KEYWORDS    RefSeq.
SOURCE      Clostridium vitabionis
  ORGANISM  Clostridium vitabionis
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022564.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11114.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Clostridium vitabionis"
                     /db_xref="taxon:2784388"
     Protein         1..161
                     /product="minor capsid protein"
                     /calculated_mol_wt=18057
     Region          67..161
                     /region_name="Minor_capsid_2"
                     /note="Minor capsid protein; pfam11114"
                     /db_xref="CDD:431662"
ORIGIN      
        1 mgvkrwnknd fhnglrrqhr prlrfdetla drrqimafki etprgciiet kggtaklvwn
       61 dgfgekmsgk fdkaqeiids eclrfmnplt pmrtgamiks atlgtvigsg eivyaapyar
      121 rqyynnqggs pahpqakgmw fetmkaahka dilraagkev k
//
LOCUS       WP_235986056             153 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing protein [Clostridium vitabionis].
ACCESSION   WP_235986056
VERSION     WP_235986056.1
KEYWORDS    RefSeq.
SOURCE      Clostridium vitabionis
  ORGANISM  Clostridium vitabionis
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01966.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Clostridium vitabionis"
                     /db_xref="taxon:2784388"
     Protein         1..153
                     /product="HD domain-containing protein"
                     /calculated_mol_wt=17131
     Region          10..146
                     /region_name="RnaY"
                     /note="HD superfamily phosphodieaserase, includes HD
                     domain of RNase Y [Translation, ribosomal structure and
                     biogenesis, General function prediction only]; COG1418"
                     /db_xref="CDD:441028"
ORIGIN      
        1 mivfsegnih didhfirvwt yartigkleg vdqdtqfiie aaaithdiac plcrekygnt
       61 ngkyqeaegg plvrkflegt glgaaqvdrv aflvghhhty seidgidyqi lieadyiana
      121 sengwdrdti rnfrdkimkt kagrqllsev fcl
//
LOCUS       WP_235986114             282 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein
            [Clostridium vitabionis].
ACCESSION   WP_235986114
VERSION     WP_235986114.1
KEYWORDS    RefSeq.
SOURCE      Clostridium vitabionis
  ORGANISM  Clostridium vitabionis
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (residues 1 to 282)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Clostridium vitabionis"
                     /db_xref="taxon:2784388"
     Protein         1..282
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=29069
     Region          65..280
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 maaslaacgs sssssttaaa teaaskvett aaaskeeste aaskaaaaed ltansadwkl
       61 aeagklhmat naafppyest tdnggyegid veiataiadk lglelavddm dfssvitsva
      121 sgksdiamag ltvneerkqn ldftdsyqna vqsiivkdds eiktaddlgn anaigcqegt
      181 tgyiycsdsy gdkaiayqdg atavqalvqg kvdavvidne pakayvaanq glkildtpfe
      241 dedyaigvak gntellksvn galeqlqqdg tvkkivdkyi te
//
LOCUS       WP_235986187             438 aa            linear   BCT 02-MAR-2025
DEFINITION  O-antigen ligase family protein [Paracoccus aerius].
ACCESSION   WP_235986187
VERSION     WP_235986187.1
KEYWORDS    RefSeq.
SOURCE      Paracoccus aerius
  ORGANISM  Paracoccus aerius
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Paracoccus.
REFERENCE   1  (residues 1 to 438)
  AUTHORS   Klena,J.D., Pradel,E. and Schnaitman,C.A.
  TITLE     Comparison of lipopolysaccharide biosynthesis genes rfaK, rfaL,
            rfaY, and rfaZ of Escherichia coli K-12 and Salmonella typhimurium
  JOURNAL   J Bacteriol 174 (14), 4746-4752 (1992)
   PUBMED   1624462
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016800.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04932.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Paracoccus aerius"
                     /db_xref="taxon:1915382"
     Protein         1..438
                     /product="O-antigen ligase family protein"
                     /calculated_mol_wt=46740
     Region          175..>340
                     /region_name="RfaL"
                     /note="O-antigen ligase [Cell wall/membrane/envelope
                     biogenesis]; COG3307"
                     /db_xref="CDD:442536"
ORIGIN      
        1 mawwlheglt vpqtksyarl lrriellgif vamlllsgav fplllsqadg slteaarakl
       61 rmiaapsyvi glglvalrpa avlrgvqhnv llmtlillpl asilwsigps itlrravalt
      121 lsmavafvfa trftprqqlv vlawvlggat flslvamavl pgralmpedg alrgvflhkn
      181 vlgwvacltv vlgiaarldv sarmrrtgll llvaglaall lstsvtslfa afaavvvsrv
      241 vllvarlqgr trlavvlgli llipllalll avgfgpllea lgkdptltgr vplwsmidae
      301 isrhpllghg ygvfwtegnp avwsiwesqg wqapnahngy retmlglgsv gllllialtf
      361 ravaqgvtlc smapgegwil pvlivcisli lnlsesiflk qndllwllys asvisiscrh
      421 aalrhpvpep acivatai
//
LOCUS       WP_235986260             191 aa            linear   BCT 02-MAR-2025
DEFINITION  rhodanese-like domain-containing protein [Paracoccus aerius].
ACCESSION   WP_235986260
VERSION     WP_235986260.1
KEYWORDS    RefSeq.
SOURCE      Paracoccus aerius
  ORGANISM  Paracoccus aerius
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Paracoccus.
REFERENCE   1  (residues 1 to 191)
  AUTHORS   Gliubich,F., Gazerro,M., Zanotti,G., Delbono,S., Bombieri,G. and
            Berni,R.
  TITLE     Active site structural features for chemically modified forms of
            rhodanese
  JOURNAL   J Biol Chem 271 (35), 21054-21061 (1996)
   PUBMED   8702871
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00581.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Paracoccus aerius"
                     /db_xref="taxon:1915382"
     Protein         1..191
                     /product="rhodanese-like domain-containing protein"
                     /calculated_mol_wt=19980
     Region          15..167
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            128
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238089"
ORIGIN      
        1 mlrlipaali almpqtagae avfdpptglr vaayrapvpd svpggrvvga devaamaagg
       61 allidamaap ghaltpedaw iiaephrtip rahwlpeigr grldprieag lrasladcdr
      121 arpvvlfckt dcwmswnavq hlaglghsei gwypggvddw adqgrdlvpv dplplgrplc
      181 tmdgvgpaal d
//
LOCUS       WP_235986385             155 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Paracoccus aerius].
ACCESSION   WP_235986385
VERSION     WP_235986385.1
KEYWORDS    RefSeq.
SOURCE      Paracoccus aerius
  ORGANISM  Paracoccus aerius
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Paracoccus.
REFERENCE   1  (residues 1 to 155)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07883.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Paracoccus aerius"
                     /db_xref="taxon:1915382"
     Protein         1..155
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=15978
     Region          11..119
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 mtaprsydam gilfrfhafp getmgkfclv eavvppglga ppnhhagete gfyvlggeia
       61 ftlagetqrv qaggfvsvpd gavhafqaig separlliin apghmheaff trtgrpvadt
      121 ttapqpldgp pdvarilsva advgmvivpp adaah
//
LOCUS       WP_235986435             290 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA/RNA non-specific endonuclease [Clostridium vitabionis].
ACCESSION   WP_235986435
VERSION     WP_235986435.1
KEYWORDS    RefSeq.
SOURCE      Clostridium vitabionis
  ORGANISM  Clostridium vitabionis
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13930.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Clostridium vitabionis"
                     /db_xref="taxon:2784388"
     Protein         1..290
                     /product="DNA/RNA non-specific endonuclease"
                     /calculated_mol_wt=31378
     Region          45..174
                     /region_name="NUC"
                     /note="DNA/RNA non-specific endonuclease; prokaryotic and
                     eukaryotic double- and single-stranded DNA and RNA
                     endonucleases also present in phosphodiesterases. They
                     exists as monomers and homodimers; cl00089"
                     /db_xref="CDD:469610"
ORIGIN      
        1 maqeqsgena fdlssvpaya gtpyieingn epyftagdlt avsyesyspl dglgrcgaai
       61 asvgrdlmps eprgsigmik psgwhtvkyd gidgnylynr chliayeltg enanernlit
      121 gtrylntegm lplenrtady vtatgnhvly rvtpvfeann lvaagvlmea esvedggkgi
      181 sfcvfcynvq pgitidyatg dssgpefqgs vqqqtleqqi adaktntapa aypkdvsdgt
      241 ryalnqntkk fhypdcssvd qikpknyaet tktrdeliae gyqpcgrchp
//
LOCUS       WP_235986441              73 aa            linear   BCT 02-MAR-2025
DEFINITION  Fic family protein [Clostridium vitabionis].
ACCESSION   WP_235986441
VERSION     WP_235986441.1
KEYWORDS    RefSeq.
SOURCE      Clostridium vitabionis
  ORGANISM  Clostridium vitabionis
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF045016.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21247.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Clostridium vitabionis"
                     /db_xref="taxon:2784388"
     Protein         1..73
                     /product="Fic family protein"
                     /calculated_mol_wt=8361
ORIGIN      
        1 meevslmney kppfhmtdki tnlvgdiseq idrikvlshg nlnpalaqgv iemtipdkpn
       61 srnqryrrkq ldr
//
LOCUS       WP_235986463             622 aa            linear   BCT 02-MAR-2025
DEFINITION  M10 family metallopeptidase C-terminal domain-containing protein
            [Pseudomonas paracarnis].
ACCESSION   WP_235986463
VERSION     WP_235986463.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas paracarnis
  ORGANISM  Pseudomonas paracarnis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020137.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08548.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Pseudomonas paracarnis"
                     /db_xref="taxon:2750625"
     Protein         1..622
                     /product="M10 family metallopeptidase C-terminal
                     domain-containing protein"
                     /GO_component="GO:0005615 - extracellular space [Evidence
                     IEA]"
                     /GO_function="GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=65209
     Region          <104..257
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          <190..401
                     /region_name="PspC_subgroup_2"
                     /note="pneumococcal surface protein PspC, LPXTG-anchored
                     form; NF033839"
                     /db_xref="CDD:468202"
     Region          <405..601
                     /region_name="Zn_serralysin"
                     /note="serralysin family metalloprotease; NF035945"
                     /db_xref="CDD:468274"
ORIGIN      
        1 minantpaan yyvptpnaap qpsqvlrsgn paesetasfl hrdanlaadk qastnsqlln
       61 lsapligart hqqrmyglsl nsgllrlgdi hsgnvvtarc ypmaeentkp tpeprpnggt
      121 kpaadqpqpn ggtkgatdqs qpnggtkpaa dqprpnggtk paadqpqpng gtkgatdqsq
      181 pnggtkpaad qprpnggtkp iadqpqpngg tkgatdqsqp nggtkpaadq prpnggtkpi
      241 adqprpsgyt tpvsdrpkpn idttpvggkp kpsvdtlpvv dkpkpnvgtl pvvdkakpnv
      301 gtlpvvdkpk pnidtlpvvd kpkpnvgtlp vvdkpkpnvd tlpvvdkpkp nidtlpvvdk
      361 pkpnvdtlpv vdkpkpnvdt lpvvdkpkln vdtlpvvdkp kqprdtrtdd ttygfnsntg
      421 kaettltsaa dkpdfnvwde rgndtfdfsg fkqdqiinlr ggsfssvggm kenvrigekt
      481 vienavgghg ndriignsad nvltggagad tlvggggwnt fkfnafsdst ranadllldf
      541 ntgqdkidls qmvldgkval nfvenytgaa gdtiikfnpq tgryllavdl dgdgktdfli
      601 kstrmisped viglnikegs yl
//
LOCUS       WP_235986520              66 aa            linear   BCT 02-MAR-2025
DEFINITION  UBP-type zinc finger domain-containing protein [Burkholderia
            contaminans].
ACCESSION   WP_235986520
VERSION     WP_235986520.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia contaminans
  ORGANISM  Burkholderia contaminans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014229.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02148.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Burkholderia contaminans"
                     /db_xref="taxon:488447"
     Protein         1..66
                     /product="UBP-type zinc finger domain-containing protein"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=7537
     Region          <1..61
                     /region_name="UBP14"
                     /note="Uncharacterized Zn-finger protein, UBP-type
                     [General function prediction only]; COG5207"
                     /db_xref="CDD:444070"
ORIGIN      
        1 mrsgsrwvhl rmclicghvg ccdsspnrha srhfretghr lvrsiepger wiwcyedevv
       61 agemps
//
LOCUS       WP_235986663             430 aa            linear   BCT 02-MAR-2025
DEFINITION  cyclic nucleotide-binding domain-containing protein [Burkholderia
            contaminans].
ACCESSION   WP_235986663
VERSION     WP_235986663.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia contaminans
  ORGANISM  Burkholderia contaminans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (residues 1 to 430)
  AUTHORS   Yau,K.W.
  TITLE     Cyclic nucleotide-gated channels: an expanding new family of ion
            channels
  JOURNAL   Proc Natl Acad Sci U S A 91 (9), 3481-3483 (1994)
   PUBMED   7513422
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012257.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00027.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Burkholderia contaminans"
                     /db_xref="taxon:488447"
     Protein         1..430
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /calculated_mol_wt=47074
     Region          <48..84
                     /region_name="XRE"
                     /note="DNA-binding transcriptional regulator, XRE-family
                     HTH domain [Transcription]; COG1476"
                     /db_xref="CDD:441085"
     Region          143..>283
                     /region_name="Crp"
                     /note="cAMP-binding domain of CRP or a regulatory subunit
                     of cAMP-dependent protein kinases [Signal transduction
                     mechanisms]; COG0664"
                     /db_xref="CDD:440428"
ORIGIN      
        1 mptltvffhw sgllsnpfdn kpgyqtmrfd wselfdelkr egqfgsdaql adslgltraq
       61 isawrngksd lgiltkikil dalghdtlrt slssllpekn reaqaaqhar llaridrvrs
      121 gaavasvepe dsthsaaamn dlltelprde lkriephlsw vtlplghvvy esgdhlshvy
      181 lpttaiisml yvmengssae iavvgrdgll gvalfmgget mpnraivqsa geafrlsgkv
      241 vkeefargga lqrlflrytq alitqmaqta vcnrhhsiaq qfcrwlllsl drldshnvrm
      301 tqgialpltl hglhtigrqg pivalhesic lpaslrplpi vrvdsmpata ccvavsrpki
      361 asrirltsas vqrqstpres wlrtlacrgl splldcrsgt ileknsvrav gnlgffefss
      421 gcgaidsrrt
//
LOCUS       WP_235986622             382 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [Burkholderia].
ACCESSION   WP_235986622
VERSION     WP_235986622.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         1..382
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=39563
     Region          11..330
                     /region_name="AraJ"
                     /note="Predicted arabinose efflux permease AraJ, MFS
                     family [Carbohydrate transport and metabolism]; COG2814"
                     /db_xref="CDD:442063"
ORIGIN      
        1 msyeikgirr iallytgavv wtptyllpfs ieesmarfgl sestagwlas avllclslsi
       61 iffgrhtatl nkrtgalaaa alavlstcam fshnfhvfva aklvlgvalg vscvcaygvi
      121 ahvkhpekva aqvavamaii fscamyvvpi lnvkmgsigv davqlavvva alffgafmhp
      181 avnaseeeva kdaiksndvr gilisaffiy vsqtalmgfa aevaatrgve aeqlgmlfml
      241 naalqlpvgv avnwlgdrfg lfkpialgla lliacslgmy cvggrwaflv atalvsagat
      301 lvapymvgal sqmdasgrst atcasainlg lavgpaiagt vfsvaglrav gwlsvgllvv
      361 plfltsvair qfkarhaeaa va
//
LOCUS       WP_235986711             176 aa            linear   BCT 02-MAR-2025
DEFINITION  integrase core domain-containing protein, partial [Burkholderia
            contaminans].
ACCESSION   WP_235986711
VERSION     WP_235986711.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia contaminans
  ORGANISM  Burkholderia contaminans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025063.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13683.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Burkholderia contaminans"
                     /db_xref="taxon:488447"
     Protein         <1..176
                     /product="integrase core domain-containing protein"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <27..160
                     /region_name="transpos_IS3"
                     /note="IS3 family transposase; NF033516"
                     /db_xref="CDD:468052"
ORIGIN      
        1 tliehghvas vnqprramas ikerlqlkcl tvideytrec laidvagsir sgrvievlsq
       61 lislhgapry lrsdngpefv srailkwaaq ngmdmalsdp gkpwqngade sfngkfrdec
      121 lslewfrtrt eakvvidqwr rhynavrphs slayltpnef kqrycsteai eavlqd
//
LOCUS       WP_235986720              98 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF2790 domain-containing protein [Pseudomonas].
ACCESSION   WP_235986720
VERSION     WP_235986720.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022429.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10976.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..98
                     /product="DUF2790 domain-containing protein"
                     /calculated_mol_wt=10806
     Region          16..96
                     /region_name="DUF2790"
                     /note="Protein of unknown function (DUF2790); cl12550"
                     /db_xref="CDD:472325"
ORIGIN      
        1 mkehqenfmn yvlfaalsvf svvatagdah nnaehdqrtp aaveynysqt ldiakvisls
       61 satsdecepv qahmiyldsq gvrhnleylr lsescars
//
LOCUS       WP_235986799             358 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6708 domain-containing protein [Pseudomonas triticifolii].
ACCESSION   WP_235986799
VERSION     WP_235986799.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas triticifolii
  ORGANISM  Pseudomonas triticifolii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042867.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20455.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Pseudomonas triticifolii"
                     /db_xref="taxon:2762592"
     Protein         1..358
                     /product="DUF6708 domain-containing protein"
                     /calculated_mol_wt=40445
     Region          139..>232
                     /region_name="DUF6708"
                     /note="Family of unknown function (DUF6708); pfam20455"
                     /db_xref="CDD:466604"
ORIGIN      
        1 mtsdkyerlp kagdtenesg tevfylaprp vptgvaafss rslhqhanev yldfglssat
       61 vefavrcsig pvmfivfffm llsialgidd hfkygspvfe ifltlflpnp yiwgfsggla
      121 lmyfccfvha vyphsrippt rfnrqrreva yvakrgeppr ftpwedviac vsssvvatqy
      181 gtqqkfalmi glrdasdgqv vwltvpsytl gmavgeweai raymeegpsa lpqpmmgenm
      241 eegtveffhm crkgyrhdhg yirylfgfll iqfcsgwtlp chiaawverl pkkafpkavl
      301 nwsrplppeq wqrpsdelie qskavrktlr kglsvfdyfs aktahearnn aaadlens
//
LOCUS       WP_235986894             490 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Halosaccharopolyspora lacisalsi].
ACCESSION   WP_235986894
VERSION     WP_235986894.1
KEYWORDS    RefSeq.
SOURCE      Halosaccharopolyspora lacisalsi
  ORGANISM  Halosaccharopolyspora lacisalsi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Halosaccharopolyspora.
REFERENCE   1  (residues 1 to 490)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Halosaccharopolyspora lacisalsi"
                     /db_xref="taxon:1000566"
     Protein         1..490
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=54021
     Region          53..358
                     /region_name="COG3940"
                     /note="Beta-xylosidase, GH43 family [Carbohydrate
                     transport and metabolism]"
                     /db_xref="CDD:443140"
     Region          357..487
                     /region_name="beta-trefoil_ABD_ABFB-like"
                     /note="Arabinose-binding domain (ABD), beta-trefoil fold,
                     found in the ABFB family; cd23265"
                     /db_xref="CDD:467807"
     Site            order(368,465..469,480,484)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467807"
     Site            order(420..423,439)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467807"
ORIGIN      
        1 mnssldrrsl lrrggllaag aataapltgt asataatdph hpsgateltt rdplveqrad
       61 pcitppvngm yymtgsvpey drlvvrgapt idglahtrer tvwrrpesgr tgghiwapel
      121 hridgrwyiy faagdsddet rmrmyvlesa aadpredaws lrgrittgwd sfsldattfe
      181 hrgkryyvwa qreqgidtns nlyiaemssp lairgdpvri avptrewetr gfavnegpav
      241 ivrngrvfmt fsasatdany cmglltadar sdlldpksws kspepvfttn dntgrfgpgh
      301 ntftvaedge tdvlvyhcrd yreiegnply dpnrharvqr lhwnddgtpa fgvpvgdggt
      361 alrfspldap dayvrhheqr lrvggagpla dtqfrfvpgf lgpdrvalqs vdlpdhhvrv
      421 rggsleispy qdsddygrat gfvrtpglad rrgvslrvsd dtyvvhddgr lttgrprgra
      481 dreratfllg
//
LOCUS       WP_235986613             218 aa            linear   BCT 02-MAR-2025
DEFINITION  TetR family transcriptional regulator C-terminal domain-containing
            protein [Burkholderia contaminans].
ACCESSION   WP_235986613
VERSION     WP_235986613.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia contaminans
  ORGANISM  Burkholderia contaminans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (residues 1 to 218)
  AUTHORS   Ramos,J.L., Martinez-Bueno,M., Molina-Henares,A.J., Teran,W.,
            Watanabe,K., Zhang,X., Gallegos,M.T., Brennan,R. and Tobes,R.
  TITLE     The TetR family of transcriptional repressors
  JOURNAL   Microbiol Mol Biol Rev 69 (2), 326-356 (2005)
   PUBMED   15944459
REFERENCE   2  (residues 1 to 218)
  AUTHORS   Kunin,C.M., Hua,T.H., Van Arsdale White,L. and Villarejo,M.
  TITLE     Growth of Escherichia coli in human urine: role of salt tolerance
            and accumulation of glycine betaine
  JOURNAL   J Infect Dis 166 (6), 1311-1315 (1992)
   PUBMED   1431248
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025343.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13977.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Burkholderia contaminans"
                     /db_xref="taxon:488447"
     Protein         1..218
                     /product="TetR family transcriptional regulator C-terminal
                     domain-containing protein"
                     /calculated_mol_wt=23856
     Region          23..209
                     /region_name="TetR_C_11"
                     /note="Tetracyclin repressor-like, C-terminal domain;
                     cl23808"
                     /db_xref="CDD:474063"
ORIGIN      
        1 mkktpgsapv qtrgrgiret pavrqqsiid atmrciarys ysettidric aeakvsrgli
       61 nhhfqskdel maqtykrlaa dlldvsraaa anatgpedkl daiikvcfaa pvfapknvkv
      121 wlgfwsvahs dpvirkahke lyagyrqalk klfdqiaevr ggtvdsdlaa ltltavidgf
      181 wlelardpts ftaedalasc lrvvdtflpp pktarkra
//
LOCUS       WP_235987152             190 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome P450 [Halosaccharopolyspora lacisalsi].
ACCESSION   WP_235987152
VERSION     WP_235987152.1
KEYWORDS    RefSeq.
SOURCE      Halosaccharopolyspora lacisalsi
  ORGANISM  Halosaccharopolyspora lacisalsi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Halosaccharopolyspora.
REFERENCE   1  (residues 1 to 190)
  AUTHORS   Werck-Reichhart,D. and Feyereisen,R.
  TITLE     Cytochromes P450: a success story
  JOURNAL   Genome Biol 1 (6), REVIEWS3003 (2000)
   PUBMED   11178272
REFERENCE   2  (residues 1 to 190)
  AUTHORS   Graham-Lorence,S., Amarneh,B., White,R.E., Peterson,J.A. and
            Simpson,E.R.
  TITLE     A three-dimensional model of aromatase cytochrome P450
  JOURNAL   Protein Sci 4 (6), 1065-1080 (1995)
   PUBMED   7549871
REFERENCE   3  (residues 1 to 190)
  AUTHORS   Degtyarenko,K.N. and Archakov,A.I.
  TITLE     Molecular evolution of P450 superfamily and P450-containing
            monooxygenase systems
  JOURNAL   FEBS Lett 332 (1-2), 1-8 (1993)
   PUBMED   8405421
REFERENCE   4  (residues 1 to 190)
  AUTHORS   Nelson,D.R., Kamataki,T., Waxman,D.J., Guengerich,F.P.,
            Estabrook,R.W., Feyereisen,R., Gonzalez,F.J., Coon,M.J.,
            Gunsalus,I.C., Gotoh,O. et al.
  TITLE     The P450 superfamily: update on new sequences, gene mapping,
            accession numbers, early trivial names of enzymes, and nomenclature
  JOURNAL   DNA Cell Biol 12 (1), 1-51 (1993)
   PUBMED   7678494
REFERENCE   5  (residues 1 to 190)
  AUTHORS   Guengerich,F.P.
  TITLE     Reactions and significance of cytochrome P-450 enzymes
  JOURNAL   J Biol Chem 266 (16), 10019-10022 (1991)
   PUBMED   2037557
REFERENCE   6  (residues 1 to 190)
  AUTHORS   Nebert,D.W. and Gonzalez,F.J.
  TITLE     P450 genes: structure, evolution, and regulation
  JOURNAL   Annu Rev Biochem 56, 945-993 (1987)
   PUBMED   3304150
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00067.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Halosaccharopolyspora lacisalsi"
                     /db_xref="taxon:1000566"
     Protein         1..190
                     /product="cytochrome P450"
                     /GO_function="GO:0004497 - monooxygenase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=20791
     Region          <1..127
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
ORIGIN      
        1 mptaaeellr fdpppqlair rfavadvdig gttvpagdtv mlslasahrd pdrftdpdal
       61 dltrdpnphl gfghgplfcl gvglarmeae tgietllrrf pdltldvpan dlrrrpsfrn
      121 rglcelpsss ergfstksre prvrlvsprk paareaanpr pserhlggln pselaqeqqh
      181 tnqlrggrpr
//
LOCUS       WP_235987278             469 aa            linear   BCT 02-MAR-2025
DEFINITION  neutral zinc metallopeptidase [Halosaccharopolyspora lacisalsi].
ACCESSION   WP_235987278
VERSION     WP_235987278.1
KEYWORDS    RefSeq.
SOURCE      Halosaccharopolyspora lacisalsi
  ORGANISM  Halosaccharopolyspora lacisalsi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Halosaccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016143.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04228.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Halosaccharopolyspora lacisalsi"
                     /db_xref="taxon:1000566"
     Protein         1..469
                     /product="neutral zinc metallopeptidase"
                     /calculated_mol_wt=49239
     Region          37..259
                     /region_name="YpfJ"
                     /note="Predicted metalloprotease [General function
                     prediction only]; COG2321"
                     /db_xref="CDD:441895"
     Region          <309..459
                     /region_name="Zn_peptidase"
                     /note="Putative neutral zinc metallopeptidase; cl19825"
                     /db_xref="CDD:473215"
ORIGIN      
        1 mavcatvvgg csrtiggipt tadtvptttv aglpvtdgps gpkpgvpdat ipventdgge
       61 mdtlaanava diqtywkqaf ptafgkkftp vkrfvsydst apgmqlcgqs tsgavnafyc
      121 plddsvswdr arllpkldns fgpmavvtvl ahemghavqq randgtegvp tivleqkadc
      181 ftgaffrhva egaakhfris tgpglnkamg vlnyirdtpg ktgftgenah gssfdrisaf
      241 qhgfddgprr caemttesik rrttqfrfwk dsqetdlpin rdsatavers lrevfgdtga
      301 appeittsrs pcgggettsp asycpetntv sldvpalrrv aqppstdkrn sgygdfaaya
      361 qvasryalsv qkaaglpldg kaaglrtacl vgswsgllve dpigqrnpvg klriapgdid
      421 egtaallgdd sliaadvdgd qvpagfarve afrvgfqqgm spcttkygk
//
LOCUS       WP_235987457             317 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Halosaccharopolyspora lacisalsi].
ACCESSION   WP_235987457
VERSION     WP_235987457.1
KEYWORDS    RefSeq.
SOURCE      Halosaccharopolyspora lacisalsi
  ORGANISM  Halosaccharopolyspora lacisalsi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Halosaccharopolyspora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024917.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13527.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Halosaccharopolyspora lacisalsi"
                     /db_xref="taxon:1000566"
     Protein         1..317
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /calculated_mol_wt=35423
     Region          <1..314
                     /region_name="PRK01346"
                     /note="enhanced intracellular survival protein Eis"
                     /db_xref="CDD:234945"
ORIGIN      
        1 mmrkqltelh ergepiaalh aseatiygrf gygiathglr mrgekrsmrf rpdvdlgrgs
       61 irlvdraear pliepvydav rrrsvgwldr pdrfwrarly deehvrggat alrfavhrep
      121 dgavtgyaiy rlkgtgdddp dstvrvielv attrqahaav wrfladidlh pwisyeaald
      181 eplphlllda ravrstmidr vwvrlvdidr alaarryatp ldvvlevtdp fcpwnaghyr
      241 lqadgdsvtc ertreraelr lsstelgaiy lggttlasla aagrvtefrp gavaecttaf
      301 rghrepfhpc gaafpgc
//
LOCUS       WP_235987819             367 aa            linear   BCT 02-MAR-2025
DEFINITION  globin domain-containing protein [Halosaccharopolyspora lacisalsi].
ACCESSION   WP_235987819
VERSION     WP_235987819.1
KEYWORDS    RefSeq.
SOURCE      Halosaccharopolyspora lacisalsi
  ORGANISM  Halosaccharopolyspora lacisalsi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Halosaccharopolyspora.
REFERENCE   1  (residues 1 to 367)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 367)
  AUTHORS   Bogusz,D., Appleby,C.A., Landsmann,J., Dennis,E.S., Trinick,M.J.
            and Peacock,W.J.
  TITLE     Functioning haemoglobin genes in non-nodulating plants
  JOURNAL   Nature 331 (6152), 178-180 (1988)
   PUBMED   2448639
REFERENCE   3  (residues 1 to 367)
  AUTHORS   Bashford,D., Chothia,C. and Lesk,A.M.
  TITLE     Determinants of a protein fold. Unique features of the globin amino
            acid sequences
  JOURNAL   J Mol Biol 196 (1), 199-216 (1987)
   PUBMED   3656444
REFERENCE   4  (residues 1 to 367)
  AUTHORS   Kinniburgh,A.J., Maquat,L.E., Schedl,T., Rachmilewitz,E. and
            Ross,J.
  TITLE     mRNA-deficient beta o-thalassemia results from a single nucleotide
            deletion
  JOURNAL   Nucleic Acids Res 10 (18), 5421-5427 (1982)
   PUBMED   6292840
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012272.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00042.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Halosaccharopolyspora lacisalsi"
                     /db_xref="taxon:1000566"
     Protein         1..367
                     /product="globin domain-containing protein"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=40789
     Region          5..121
                     /region_name="Mb-like_oxidoreductase"
                     /note="Globin domain of uncharacterized oxidoreductases
                     containing a FAD/NADH binding domain; cd19753"
                     /db_xref="CDD:381293"
     Site            order(37..38,45,48..49,52,73,76..77,82,86..87,90)
                     /site_type="other"
                     /note="putative heme binding site [chemical binding]"
                     /db_xref="CDD:381293"
     Region          142..364
                     /region_name="O2ase_reductase_like"
                     /note="The oxygenase reductase FAD/NADH binding domain
                     acts as part of the multi-component bacterial oxygenases
                     which oxidize hydrocarbons using oxygen as the oxidant.
                     Electron transfer is from NADH via FAD (in the oxygenase
                     reductase) and an [2FE-2S]...; cd06187"
                     /db_xref="CDD:99784"
     Site            order(170,183..186,200..202,204,208..210,249,252,362,364)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99784"
     Site            order(183,185..186)
                     /site_type="other"
                     /note="FAD binding motif [chemical binding]"
                     /db_xref="CDD:99784"
     Site            order(207,210,213,220,228,230)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99784"
     Site            order(244,248..251,253)
                     /site_type="other"
                     /note="beta-alpha-beta structure motif"
                     /db_xref="CDD:99784"
     Site            order(249..250,275..277,337..338)
                     /site_type="other"
                     /note="NAD binding pocket [chemical binding]"
                     /db_xref="CDD:99784"
ORIGIN      
        1 mvrlireswa avephseevg kffygmlfsl apatrelfpv nmevqrsrll ralvhviqmv
       61 drpddllpfl hqlgrdhrkf gvvadhyeal gtallaavkk yagdtwtdev erawaeaytv
      121 masamteaaa adegpawyng evveherlgw dvavvrvrpe hpvpyqagqy vsvevpqrpr
      181 lwryltpana paedgtlefh irkvdegwvs raivgharag dqwrigapmg rltvdrsser
      241 dvlmvaggtg lapmraivee laqygknpnv hlfyggrtrd dlydlenlqq vamsnpwltv
      301 tpvldndpga vgaeqgtlad vvarhgtwae rdvmvsgsps miratvsrml vagtpleriq
      361 ydpftld
//
LOCUS       WP_235987833            1028 aa            linear   BCT 02-MAR-2025
DEFINITION  arabinosyltransferase domain-containing protein
            [Halosaccharopolyspora lacisalsi].
ACCESSION   WP_235987833
VERSION     WP_235987833.1
KEYWORDS    RefSeq.
SOURCE      Halosaccharopolyspora lacisalsi
  ORGANISM  Halosaccharopolyspora lacisalsi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Halosaccharopolyspora.
REFERENCE   1  (residues 1 to 1028)
  AUTHORS   Belanger,A.E., Besra,G.S., Ford,M.E., Mikusova,K., Belisle,J.T.,
            Brennan,P.J. and Inamine,J.M.
  TITLE     The embAB genes of Mycobacterium avium encode an arabinosyl
            transferase involved in cell wall arabinan biosynthesis that is the
            target for the antimycobacterial drug ethambutol
  JOURNAL   Proc Natl Acad Sci U S A 93 (21), 11919-11924 (1996)
   PUBMED   8876238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016484.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04602.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Halosaccharopolyspora lacisalsi"
                     /db_xref="taxon:1000566"
     Protein         1..1028
                     /product="arabinosyltransferase domain-containing protein"
                     /GO_function="GO:0052636 - arabinosyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0071766 - Actinobacterium-type cell wall
                     biogenesis [Evidence IEA]"
                     /calculated_mol_wt=110168
     Region          56..197
                     /region_name="Arabino_trans_N"
                     /note="Arabinosyltransferase concanavalin like domain;
                     pfam17689"
                     /db_xref="CDD:435976"
     Region          202..608
                     /region_name="Arabinose_trans"
                     /note="Mycobacterial cell wall arabinan synthesis protein;
                     pfam04602"
                     /db_xref="CDD:377388"
ORIGIN      
        1 maadfssmgv ipppsslssk ersrwgnwli aalaaltval gisaalapvi addpvvtwpe
       61 agqeptstvl plspyrplsl dahvpcttlr avnanspqgg talstrpnga pgmevsargg
      121 evlfrmsgre vftepipdgg ctyrvlagsd gvrvlrdgdm larapellpp qvaelatdae
      181 gmpqasglav elhtdaryqs rptalkvvll tahglalatl lvvtwrrwrd prpsrtprlp
      241 rpgaadavmv lvaaawvfls panmddgwyl mmarnagesg yignfvymfn vtenpfvlsq
      301 ymlqlwgelg gwslwwmrlv ptlcglatwa llrvlmtval gragtmrtvp wallvaflvw
      361 ylpygvtlrp epvivmcaaa tlvfaelavl rhsigalava ticaalavta spsgvvaaap
      421 lllslpwlvr wlrqqswsar vgavtlavas atvvvpigfa datlgdalea idvhqwyyls
      481 fawyeefvhy dtlinsstwa rrlpvlltlg vlvvvalssg rggtgrdpvr rlvlvsaitt
      541 svalvlials ptkwvnhfha vaaaptvlla avllrsplpr ragpmltgas llalvgtvsl
      601 syagpnwwip ftdagqrfgn hldpdlttnn taphiselyl rnpapwlava alawawgawr
      661 rsrgklvlvt pdravvsaas lgsvllmval fayapigqap gwtvarsgvr smfgggcgls
      721 davrvqlpae kqllppatpp atagdfgndr plpvsadpwp rpvkvwhddl pdgtttgtgq
      781 vttgwyplpk sttgthvtvp vagslanqgv evqfgqrsgd gwavassesp asdlrrpphe
      841 wqqlsvplpa drpgavrvvv tdrvtgansw vtvaepelta arpiteltsg kavlanhiaa
      901 glwpcvnqvd idngitetpr vrmtvddllp pgwpdnisnl twggawmqta rswtqtelha
      961 elhpkgpprk pwghvfaidy phptgrydlr veqnvrwgwe rlptladndy pniennagtq
     1021 veeptsds
//
LOCUS       WP_417281882             308 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR family transcriptional regulator [Brachybacterium rhamnosum].
ACCESSION   WP_417281882
VERSION     WP_417281882.1
KEYWORDS    RefSeq.
SOURCE      Brachybacterium rhamnosum
  ORGANISM  Brachybacterium rhamnosum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Dermabacteraceae; Brachybacterium.
REFERENCE   1  (residues 1 to 308)
  AUTHORS   Maddocks,S.E. and Oyston,P.C.F.
  TITLE     Structure and function of the LysR-type transcriptional regulator
            (LTTR) family proteins
  JOURNAL   Microbiology (Reading) 154 (Pt 12), 3609-3623 (2008)
   PUBMED   19047729
REFERENCE   2  (residues 1 to 308)
  AUTHORS   Schell,M.A.
  TITLE     Molecular biology of the LysR family of transcriptional regulators
  JOURNAL   Annu Rev Microbiol 47, 597-626 (1993)
   PUBMED   8257110
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10444297
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Brachybacterium rhamnosum"
                     /db_xref="taxon:173361"
     Protein         1..308
                     /product="LysR family transcriptional regulator"
                     /GO_function="GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /calculated_mol_wt=33115
     Region          4..62
                     /region_name="HTH_1"
                     /note="Bacterial regulatory helix-turn-helix protein, lysR
                     family; pfam00126"
                     /db_xref="CDD:459683"
     Region          94..281
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(108..109,111..112,115,119,121..127,222..227,
                     233..234,236..237)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176102"
ORIGIN      
        1 mlnlhrlfll helrrletms avaathslsp savsqqlshl eretrvtlfe qagrrviltd
       61 agmqlarrae emlglveaae aelalaqgea sgvlrvasfq tplialapat vsileeshpd
      121 lrielaqrev deayegllah rfevilgedy pggrqvvrrg tdregllddp lllvlpsagp
      181 wsapgtladl adapwaldpe dtrtgdwert ylrsagiepr irfdtpdpll qvhlvrsgha
      241 vafvpgiias ehlggtrpvr lpgdpqrsly taaragaagh pallafraal leagagprdl
      301 vgldrigg
//
LOCUS       WP_235988122             880 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Roseibium aggregatum].
ACCESSION   WP_235988122
VERSION     WP_235988122.1
KEYWORDS    RefSeq.
SOURCE      Roseibium aggregatum
  ORGANISM  Roseibium aggregatum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Roseibium.
REFERENCE   1  (residues 1 to 880)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 880)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 880)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 880)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..880
                     /organism="Roseibium aggregatum"
                     /db_xref="taxon:187304"
     Protein         1..880
                     /product="ATP-binding protein"
                     /calculated_mol_wt=97353
     Region          230..>404
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
     Region          323..746
                     /region_name="NtrY"
                     /note="Signal transduction histidine kinase NtrY involved
                     in nitrogen fixation and metabolism regulation [Signal
                     transduction mechanisms]; COG5000"
                     /db_xref="CDD:444024"
     Region          763..>837
                     /region_name="CitB"
                     /note="DNA-binding response regulator DpiB of
                     citrate/malate metabolism [Transcription, Signal
                     transduction mechanisms]; COG4565"
                     /db_xref="CDD:443622"
ORIGIN      
        1 msmqarimvl afccvivstl vigtiaynri reatfdqaae rlagqtklma qrfrlayrdi
       61 eedlfalstt ppirgiiras anggidpydg sslenwrsrl aaifasimrn rqsyfqmrfi
      121 giadqgrevv hidrvenger atptsllqqk igepyfaram dgasgkvlfs dvtynrefgg
      181 vdprkipair gmlpidrpdg trfgflvinv dykkmlqatf eelapntntl vvngsgdymq
      241 ylkdgpvkeh plelhgaytr pvprsvtetl rsplqggllh dnesvayfvk ekgnigasdf
      301 isvilqvted elysdarktr revvltgill ilaclsisvl iarammapln rlvglvrgvd
      361 drellaklpv drtdevgdla rslkertqal fasearagai vdnvldglll igengiierf
      421 npscerilgy kaeevigknv amfmeaplaa rhdgflseyv nghgsgfidt srevvavtrs
      481 gekipielai salrlegavk fsgvirdird rkemdrlkae fvstvshelr tpltsirgsl
      541 glierlmpae lsesfrqmvh larknterli vlvndildfe klsankleyd mstadvnael
      601 kqaaelnagy aeehdvsidl rladealrvs vdvnrfqqil anlisnaikf srrgetvvir
      661 aegvgdyiri svidtgagis dafkenlftp faqadgtssr eksgtglgla itkrfvegmn
      721 gsidftsqeg vgttfhvefp qleasasmea leraegdgrl vglhieddtd fykilaanvd
      781 ddillvqart ldearrrmav dyfdvliidi sledgnglti ldelgdverm vvvvltaldi
      841 qiddprvdli vvksrtrrgd lpemlrdltd rkirkravas
//
LOCUS       WP_235988517             955 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Pseudorhizobium endolithicum].
ACCESSION   WP_235988517
VERSION     WP_235988517.1
KEYWORDS    RefSeq.
SOURCE      Pseudorhizobium endolithicum
  ORGANISM  Pseudorhizobium endolithicum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Pseudorhizobium.
REFERENCE   1  (residues 1 to 955)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Pseudorhizobium endolithicum"
                     /db_xref="taxon:1191678"
     Protein         1..955
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=105524
     Region          41..158
                     /region_name="7TMR-DISMED2"
                     /note="7TMR-DISM extracellular 2; pfam07696"
                     /db_xref="CDD:429601"
     Region          179..374
                     /region_name="7TMR-DISM_7TM"
                     /note="7TM diverse intracellular signalling; pfam07695"
                     /db_xref="CDD:429600"
     Region          283..948
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mlmllfglla asmlqvpyar aaepvkisrd dtaldltemt diytnqgeaf qvstaagadg
       61 irrrievrss spshqgdwav falanvseeq lervivaphf rmvgskliwp dlgaqriiai
      121 tpsegfaldr epspdadvfr itlnpgsvit fvaelstptl pqlylwepaa ykdtvnaftl
      181 yrgivlgiag llavfltilf vvkgtsmlpa aaalawavla yicvdfgfld klisitasdq
      241 rvwracaeva lasslviflf tylnlnrwhv hlgyatfawi fclvllfgva iydpsiasgi
      301 arlsfaltat agilliiylg lnrfdraill vptwalilvw lfggwltvtg qldndiiqpa
      361 lggglvlivl ligftvmqha faggayqqgl fsdlerqsla ltgsgdtvwd wdvsrdrvvt
      421 ipdislrfgl pagamhgpir gwlprlhpdd rdrfkatldv llehrrgrls hefrvraedg
      481 hfhwmqirar pvlgsdgeii rcvgtiidvt eqknsverll qdamhdnltg lpnrqvfldr
      541 lqavltlatt sehvrptvms ididrykqvn dalgiaagdn ilialtrrlr rllrpqdtla
      601 rlsgdqfgli lvseqdpvki adfadavska imvpinfanr eiiltasigl aswvdqqesg
      661 iellsnaela myrakrgggn rvepfrpifr ssgtdrlqie tdlrraierk elslayqpii
      721 rlsdgeiagf ealmrwdhpr kgsippsdfi piaeasdlis plgmfamera ssdlidwqrq
      781 tgelpifvsv nlssaqvlnn nlysevrall aksecdprql kleltesvmm enpeqarlvl
      841 tklkeigvgl alddfgtgys slayltqfpf dtikldkalv rdvrerravl lrsviamara
      901 lemsvvaegi etdedaaela kmgchfgqsf lfgpptsgea tlrllkerfp ltkra
//
LOCUS       WP_235988616             379 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Pseudorhizobium
            endolithicum].
ACCESSION   WP_235988616
VERSION     WP_235988616.1
KEYWORDS    RefSeq.
SOURCE      Pseudorhizobium endolithicum
  ORGANISM  Pseudorhizobium endolithicum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Pseudorhizobium.
REFERENCE   1  (residues 1 to 379)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Pseudorhizobium endolithicum"
                     /db_xref="taxon:1191678"
     Protein         <1..379
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <31..348
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(106..107,110..111,114,117..118,120..121,124,
                     127..128,131,134..135,138..139,142,145..146,148..149,153,
                     155..156,159,162..163,166..167,170,173,176..177,180,184,
                     187,194,198,201,204..205,208,211..212,215..216,218..219,
                     222..223,236..237,240,243..244,247,250..251,253..254,
                     257..258,261,264..265,268,271..272,274..275,278..279,
                     281..282,285,288..289,292,295)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            176..209
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 qseeqrrrta eqeriraeam aqattgladg lkqlaagnla vqlnqsfaee feslredfnr
       61 avvqlkdtma svaestssid sgsreisqsa edlskrteqq aasleetaaa ldqittnvan
      121 sskraeeart vaiqanesar hsgavvanav damgkieqss sqisniigvi ddiafqtnll
      181 alnagveaar ageagkgfav vaqevrelaq rsataakeik dlirnssaev gngvklvsdt
      241 gealktiesy ivtinqhmda iatsareqsv glsevntavn qmdqvtqqna amveeanaag
      301 atlaneasrl rgligqfqlg gpaayqpapq rastqvakag prsapvaspa rsmmgkiana
      361 fsakgsaava vsndsweef
//
LOCUS       WP_235988655              27 aa            linear   BCT 02-MAR-2025
DEFINITION  TIGR02186 family protein, partial [Pseudorhizobium endolithicum].
ACCESSION   WP_235988655
VERSION     WP_235988655.1
KEYWORDS    RefSeq.
SOURCE      Pseudorhizobium endolithicum
  ORGANISM  Pseudorhizobium endolithicum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Pseudorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021148.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09608.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..27
                     /organism="Pseudorhizobium endolithicum"
                     /db_xref="taxon:1191678"
     Protein         <1..27
                     /product="TIGR02186 family protein"
     Region          <1..27
                     /region_name="Alph_Pro_TM"
                     /note="Putative transmembrane protein (Alph_Pro_TM);
                     cl09826"
                     /db_xref="CDD:447825"
ORIGIN      
        1 qpiaygflcv liavitgwga slifrke
//
LOCUS       WP_235988702             176 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Pseudorhizobium endolithicum].
ACCESSION   WP_235988702
VERSION     WP_235988702.1
KEYWORDS    RefSeq.
SOURCE      Pseudorhizobium endolithicum
  ORGANISM  Pseudorhizobium endolithicum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Pseudorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025124.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13749.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Pseudorhizobium endolithicum"
                     /db_xref="taxon:1191678"
     Protein         1..176
                     /product="ATP-binding protein"
                     /calculated_mol_wt=20233
     Region          13..98
                     /region_name="HATPase_c_4"
                     /note="Putative ATP-dependent DNA helicase recG
                     C-terminal; pfam13749"
                     /db_xref="CDD:463975"
ORIGIN      
        1 mplihrdysv sddiqiiifq drievrspgr lpgfvtvhnf ldvrysrnsk ivrtlakykd
       61 apnkdlgegl ntafekmkew klksptlred gnyvvvtiph tplatpeelv leflethpei
      121 rnrqareitg irsenqmkev fyrlkvknli eliperkgna aawrlvkpsi spdvds
//
LOCUS       WP_235988714              65 aa            linear   BCT 02-MAR-2025
DEFINITION  alcohol dehydrogenase catalytic domain-containing protein, partial
            [Pseudorhizobium endolithicum].
ACCESSION   WP_235988714
VERSION     WP_235988714.1
KEYWORDS    RefSeq.
SOURCE      Pseudorhizobium endolithicum
  ORGANISM  Pseudorhizobium endolithicum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Pseudorhizobium.
REFERENCE   1  (residues 1 to 65)
  AUTHORS   Taneja,B. and Mande,S.C.
  TITLE     Conserved structural features and sequence patterns in the GroES
            fold family
  JOURNAL   Protein Eng 12 (10), 815-818 (1999)
   PUBMED   10556240
REFERENCE   2  (residues 1 to 65)
  AUTHORS   Murzin,A.G.
  TITLE     Structural classification of proteins: new superfamilies
  JOURNAL   Curr Opin Struct Biol 6 (3), 386-394 (1996)
   PUBMED   8804825
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08240.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Pseudorhizobium endolithicum"
                     /db_xref="taxon:1191678"
     Protein         <1..>65
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
     Region          1..>65
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
ORIGIN      
        1 adpeglfpai lghegagivv dvgpgvtsvk kgdhviplyt pecrecpscl srktnlctai
       61 rstqg
//
LOCUS       WP_235988735             573 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Pseudorhizobium endolithicum].
ACCESSION   WP_235988735
VERSION     WP_235988735.1
KEYWORDS    RefSeq.
SOURCE      Pseudorhizobium endolithicum
  ORGANISM  Pseudorhizobium endolithicum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Pseudorhizobium.
REFERENCE   1  (residues 1 to 573)
  AUTHORS   Todone,F., Vanoni,M.A., Mozzarelli,A., Bolognesi,M., Coda,A.,
            Curti,B. and Mattevi,A.
  TITLE     Active site plasticity in D-amino acid oxidase: a crystallographic
            analysis
  JOURNAL   Biochemistry 36 (19), 5853-5860 (1997)
   PUBMED   9153426
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013434.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01266.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Pseudorhizobium endolithicum"
                     /db_xref="taxon:1191678"
     Protein         1..573
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=60985
     Region          5..553
                     /region_name="PRK12843"
                     /note="FAD-dependent oxidoreductase"
                     /db_xref="CDD:237225"
ORIGIN      
        1 mqrslaelge vdlvvlgsga sglsaaltat legltvavle vapvfggtta rssgtvwipd
       61 nqlmraagfa pdaetaeayl aalvgddspr erwkaflhqa pamqadlear agivfrpyls
      121 apdyrseleg aapggralep vafdgrllgg wfetiaepir eltvmggmmv traeaqrlir
      181 aerspaamle glklvarhvd drrryrrgtr lvmgnalvar llhgmltrgg hafpnvhvrk
      241 ieisdgravg vngvhcgrdf slaaragivl agggfpsdpe mrskylpaat pdyspaspfa
      301 rgstirlgik aggqlgpdlg snamwfpssl warpkgglav fphialdrak pgsiivdqqg
      361 erfaneavsy hdfceamfrh gptafpawiv agrdfirryg lgvirprtps ltsflrsgyl
      421 rtgenaeala ralglpsgsl ghsiarfndf arrghdadfq rgetayersn gdpdrglsnp
      481 clgevgtgql yavalwptpl atarglvcgk eaevldrsgh pipglyaagn dmqsvfgghy
      541 pgagaqigpa mtfgwaaarh aarhvqksnr rtt
//
LOCUS       WP_235988382              61 aa            linear   BCT 02-MAR-2025
DEFINITION  peptide deformylase, partial [Gulosibacter sediminis].
ACCESSION   WP_235988382
VERSION     WP_235988382.1
KEYWORDS    RefSeq.
SOURCE      Gulosibacter sediminis
  ORGANISM  Gulosibacter sediminis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Gulosibacter.
REFERENCE   1  (residues 1 to 61)
  AUTHORS   Dardel,F., Ragusa,S., Lazennec,C., Blanquet,S. and Meinnel,T.
  TITLE     Solution structure of nickel-peptide deformylase
  JOURNAL   J Mol Biol 280 (3), 501-513 (1998)
   PUBMED   9665852
REFERENCE   2  (residues 1 to 61)
  AUTHORS   Meinnel,T., Blanquet,S. and Dardel,F.
  TITLE     A new subclass of the zinc metalloproteases superfamily revealed by
            the solution structure of peptide deformylase
  JOURNAL   J Mol Biol 262 (3), 375-386 (1996)
   PUBMED   8845003
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013492.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01327.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..61
                     /organism="Gulosibacter sediminis"
                     /db_xref="taxon:1729695"
     Protein         <1..61
                     /product="peptide deformylase"
                     /GO_function="GO:0042586 - peptide deformylase activity
                     [Evidence IEA]"
     Region          <1..42
                     /region_name="Def"
                     /note="Peptide deformylase [Translation, ribosomal
                     structure and biogenesis]; COG0242"
                     /db_xref="CDD:440012"
ORIGIN      
        1 elraegwlar ilqheydhld gviyvdrlav pnhkqafkim rkrgwnvpgk swlpgdekle
       61 g
//
LOCUS       WP_235988763             847 aa            linear   BCT 02-MAR-2025
DEFINITION  HWE histidine kinase domain-containing protein [Pseudorhizobium
            endolithicum].
ACCESSION   WP_235988763
VERSION     WP_235988763.1
KEYWORDS    RefSeq.
SOURCE      Pseudorhizobium endolithicum
  ORGANISM  Pseudorhizobium endolithicum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Pseudorhizobium.
REFERENCE   1  (residues 1 to 847)
  AUTHORS   Herrou,J., Crosson,S. and Fiebig,A.
  TITLE     Structure and function of HWE/HisKA2-family sensor histidine
            kinases
  JOURNAL   Curr Opin Microbiol 36, 47-54 (2017)
   PUBMED   28193573
REFERENCE   2  (residues 1 to 847)
  AUTHORS   Karniol,B. and Vierstra,R.D.
  TITLE     The HWE histidine kinases, a new family of bacterial two-component
            sensor kinases with potentially diverse roles in environmental
            signaling
  JOURNAL   J Bacteriol 186 (2), 445-453 (2004)
   PUBMED   14702314
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019174.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07536.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..847
                     /organism="Pseudorhizobium endolithicum"
                     /db_xref="taxon:1191678"
     Protein         1..847
                     /product="HWE histidine kinase domain-containing protein"
                     /GO_function="GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=93161
     Region          12..117
                     /region_name="PAS_2"
                     /note="PAS fold; pfam08446"
                     /db_xref="CDD:400652"
     Region          143..283
                     /region_name="GAF"
                     /note="GAF domain; pfam01590"
                     /db_xref="CDD:460259"
     Region          319..496
                     /region_name="PHY"
                     /note="Phytochrome region; pfam00360"
                     /db_xref="CDD:425635"
     Region          <514..701
                     /region_name="PRK13559"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:237427"
     Region          735..844
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(823..826,828)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 mrdtaavdlt ncdrepiqip gtiqphgcli acdptgttvl rysanaaeml svgplavgar
       61 ledvfgreva htlrnaiata gdparpalrh glqlpaghrf dvsvhlhean aiiefepita
      121 tadqplevar mlisrirnig kvdqllerss rlihallgyd rvmiyrfeed gagkvisehk
      181 rrdlesfkgq yfpasdipkq arilylknti riitdarner vrlvperdea dspldlsfah
      241 lrsvspvhce ylrnmgvgas msisiivdge lwgliachhy spkvlsmpqr iaaetfgeff
      301 slhlgallqk qvvqksqavr rsldqflqqa shhtdirqll rsslddfrsm lpcdgvglwl
      361 ggswasagta pderlaarla ervaetaagr iwsthrfslh fpdldapekv faglvaipls
      421 qrsrdylfff rreviqtlnw agnpdksyea gplgdrltpr ksfaiwketv rdqaqpwsea
      481 dievaealrg vlveivlhhn eliadergka dvrqrmlnee lnhrvknils vimslvgqpv
      541 dtgqdirgyv eslkgriqal alahdqivrg gdggmlrdll yaelrpyqsg etkillegpp
      601 vwldarsfsv malvlhemat naakygalss kggmltvrws rsdagsceir wleeggptva
      661 aptrtgfgsv ligrsisyel egesrieyps tglegyfcip skhihpdsgv dvvvpepvhs
      721 aapapqgldl advelllved qmliaadvem mlaahglsrv ttipsaaeal rkleqfrpdi
      781 aildvnlgtg tslpvaqelt rrgipfmfat gytdrsiipa nldvpvlrkp yevsalistv
      841 atvlagr
//
LOCUS       WP_235988826             229 aa            linear   BCT 02-MAR-2025
DEFINITION  3D domain-containing protein [Aquibacillus kalidii].
ACCESSION   WP_235988826
VERSION     WP_235988826.1
KEYWORDS    RefSeq.
SOURCE      Aquibacillus kalidii
  ORGANISM  Aquibacillus kalidii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Aquibacillus.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   van Straaten,K.E., Dijkstra,B.W., Vollmer,W. and Thunnissen,A.M.
  TITLE     Crystal structure of MltA from Escherichia coli reveals a unique
            lytic transglycosylase fold
  JOURNAL   J Mol Biol 352 (5), 1068-1080 (2005)
   PUBMED   16139297
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06725.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Aquibacillus kalidii"
                     /db_xref="taxon:2762597"
     Protein         1..229
                     /product="3D domain-containing protein"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /calculated_mol_wt=25448
     Region          99..197
                     /region_name="DPBB_YuiC-like"
                     /note="double-psi beta-barrel fold of YuiC subfamily
                     proteins; cd22786"
                     /db_xref="CDD:439263"
     Site            order(99..103,105,125,127..128,130,134,136,144..153,
                     155..156,159,177,179,184,186..197)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:439263"
     Site            order(121..124,129,162..165)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:439263"
ORIGIN      
        1 mkkllkritm ttlflsalyt tvlnvsnvsa akistddnyq yteeqsivyg vqpiskvtle
       61 kkalnhkqar ttyissqqvd gpktledtin ldkypssvvt atgytagves tgktqdhpey
      121 gitysgvkvk rdiystiaad ldvypigtil yvpgygygvv adkggaitgn kidlyyptve
      181 qvyeewgkkq vevyliekge ghlteevlns lnetealqvf reqyrkvke
//
LOCUS       WP_235988927             173 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5412 family protein [Aquibacillus kalidii].
ACCESSION   WP_235988927
VERSION     WP_235988927.1
KEYWORDS    RefSeq.
SOURCE      Aquibacillus kalidii
  ORGANISM  Aquibacillus kalidii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Aquibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036643.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17428.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Aquibacillus kalidii"
                     /db_xref="taxon:2762597"
     Protein         1..173
                     /product="DUF5412 family protein"
                     /calculated_mol_wt=19798
     Region          71..171
                     /region_name="DUF5412"
                     /note="Family of unknown function (DUF5412); pfam17428"
                     /db_xref="CDD:435910"
ORIGIN      
        1 makhyniwsf ciclvclifs fslffsawti fppyvpwsla mlafilgimg fedkrnkisk
       61 lrswftvvss illliplsfv lllgslrplf vseeliktsh spdenytief yltnggatta
      121 fgvigkldgp lwfekaiydd yrmqyaevew innhtvsing hvldlkrget ffd
//
LOCUS       WP_235988962              75 aa            linear   BCT 02-MAR-2025
DEFINITION  NETI motif-containing protein [Aquibacillus kalidii].
ACCESSION   WP_235988962
VERSION     WP_235988962.1
KEYWORDS    RefSeq.
SOURCE      Aquibacillus kalidii
  ORGANISM  Aquibacillus kalidii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Aquibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025410.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14044.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Aquibacillus kalidii"
                     /db_xref="taxon:2762597"
     Protein         1..75
                     /product="NETI motif-containing protein"
                     /calculated_mol_wt=8771
     Region          14..69
                     /region_name="NETI"
                     /note="NETI protein; pfam14044"
                     /db_xref="CDD:433669"
ORIGIN      
        1 mtkkkqdktr mkkqyevgeq etvdqcidri rkegytpirr iekpifkeve qngdigyepv
       61 srtiifdavp vkdeq
//
LOCUS       WP_235988971              65 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6980 family protein [Aquibacillus kalidii].
ACCESSION   WP_235988971
VERSION     WP_235988971.1
KEYWORDS    RefSeq.
SOURCE      Aquibacillus kalidii
  ORGANISM  Aquibacillus kalidii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Aquibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046747.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22400.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Aquibacillus kalidii"
                     /db_xref="taxon:2762597"
     Protein         1..65
                     /product="DUF6980 family protein"
                     /calculated_mol_wt=7349
ORIGIN      
        1 mmqkhccedm dyhanftcdi hedpfdcpdk liiynekkkd ygliihdggs shieigfcpw
       61 cgsal
//
LOCUS       WP_235989071             361 aa            linear   BCT 02-MAR-2025
DEFINITION  JmjC domain-containing protein [Pseudomonas lopnurensis].
ACCESSION   WP_235989071
VERSION     WP_235989071.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas lopnurensis
  ORGANISM  Pseudomonas lopnurensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 361)
  AUTHORS   Chowdhury,R., Sekirnik,R., Brissett,N.C., Krojer,T., Ho,C.H.,
            Ng,S.S., Clifton,I.J., Ge,W., Kershaw,N.J., Fox,G.C., Muniz,J.R.C.,
            Vollmar,M., Phillips,C., Pilka,E.S., Kavanagh,K.L., von Delft,F.,
            Oppermann,U., McDonough,M.A., Doherty,A.J. and Schofield,C.J.
  TITLE     Ribosomal oxygenases are structurally conserved from prokaryotes to
            humans
  JOURNAL   Nature 510 (7505), 422-426 (2014)
   PUBMED   24814345
REFERENCE   2  (residues 1 to 361)
  AUTHORS   van Staalduinen,L.M., Novakowski,S.K. and Jia,Z.
  TITLE     Structure and functional analysis of YcfD, a novel
            2-oxoglutarate/Fe(2)-dependent oxygenase involved in translational
            regulation in Escherichia coli
  JOURNAL   J Mol Biol 426 (9), 1898-1910 (2014)
   PUBMED   24530688
REFERENCE   3  (residues 1 to 361)
  AUTHORS   Ge,W., Wolf,A., Feng,T., Ho,C.H., Sekirnik,R., Zayer,A.,
            Granatino,N., Cockman,M.E., Loenarz,C., Loik,N.D., Hardy,A.P.,
            Claridge,T.D.W., Hamed,R.B., Chowdhury,R., Gong,L., Robinson,C.V.,
            Trudgian,D.C., Jiang,M., Mackeen,M.M., Mccullagh,J.S.,
            Gordiyenko,Y., Thalhammer,A., Yamamoto,A., Yang,M., Liu-Yi,P.,
            Zhang,Z., Schmidt-Zachmann,M., Kessler,B.M., Ratcliffe,P.J.,
            Preston,G.M., Coleman,M.L. and Schofield,C.J.
  TITLE     Oxygenase-catalyzed ribosome hydroxylation occurs in prokaryotes
            and humans
  JOURNAL   Nat Chem Biol 8 (12), 960-962 (2012)
   PUBMED   23103944
REFERENCE   4  (residues 1 to 361)
  AUTHORS   Kirienko,N.V. and Fay,D.S.
  TITLE     SLR-2 and JMJC-1 regulate an evolutionarily conserved
            stress-response network
  JOURNAL   EMBO J 29 (4), 727-739 (2010)
   PUBMED   20057358
REFERENCE   5  (residues 1 to 361)
  AUTHORS   Lu,Y., Chang,Q., Zhang,Y., Beezhold,K., Rojanasakul,Y., Zhao,H.,
            Castranova,V., Shi,X. and Chen,F.
  TITLE     Lung cancer-associated JmjC domain protein mdig suppresses
            formation of tri-methyl lysine 9 of histone H3
  JOURNAL   Cell Cycle 8 (13), 2101-2109 (2009)
   PUBMED   19502796
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019619.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08007.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Pseudomonas lopnurensis"
                     /db_xref="taxon:1477517"
     Protein         1..361
                     /product="JmjC domain-containing protein"
                     /calculated_mol_wt=41284
     Region          102..198
                     /region_name="JmjC_2"
                     /note="JmjC domain; cl46321"
                     /db_xref="CDD:480661"
ORIGIN      
        1 mkvavssndf swrdaneife rsnvasndfk lscdgirpkh eyvesywdig tlrhrlikpv
       61 vydylrngat liankianep kvnqfarrva eftgrqvvss ayaafgerds frchwdtrdv
      121 faiqligrkr wivyepsfea plftqqsrdy ehqypcpaep ymdfileagd vfylprgwwh
      181 nplplgeetf hlalgtfpay tmdylgwamk hmpdfldarr slsrwedarg tlasvgrhld
      241 afindpqnyd rflnefignt rvesplaidl fgnpnagqla edarlqlsan kphglderyv
      301 iangtrlnld dqgerlirri aerpgislae lsvhcpeada gklrelvtal crqdvlelsa
      361 h
//
LOCUS       WP_235989129             107 aa            linear   BCT 02-MAR-2025
DEFINITION  gamma-glutamyltransferase, partial [Pseudomonas lopnurensis].
ACCESSION   WP_235989129
VERSION     WP_235989129.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas lopnurensis
  ORGANISM  Pseudomonas lopnurensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013206.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01019.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Pseudomonas lopnurensis"
                     /db_xref="taxon:1477517"
     Protein         <1..>107
                     /product="gamma-glutamyltransferase"
                     /EC_number="2.3.2.2"
     Region          <1..>102
                     /region_name="Ggt"
                     /note="Gamma-glutamyltranspeptidase [Amino acid transport
                     and metabolism]; COG0405"
                     /db_xref="CDD:440174"
ORIGIN      
        1 davyrqragw rlaalrddae sarlflaage lpaeghrlrq pelaetlerl aahghdgfyr
       61 gevaeklveg vraaggiwtr edlagyrtve replrfalad greliga
//
LOCUS       WP_235989138             467 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Pseudomonas lopnurensis].
ACCESSION   WP_235989138
VERSION     WP_235989138.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas lopnurensis
  ORGANISM  Pseudomonas lopnurensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 467)
  AUTHORS   Gao,G., Nara,T., Nakajima-Shimada,J. and Aoki,T.
  TITLE     Novel organization and sequences of five genes encoding all six
            enzymes for de novo pyrimidine biosynthesis in Trypanosoma cruzi
  JOURNAL   J Mol Biol 285 (1), 149-161 (1999)
   PUBMED   9878395
REFERENCE   2  (residues 1 to 467)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
REFERENCE   3  (residues 1 to 467)
  AUTHORS   Nygaard,P., Duckert,P. and Saxild,H.H.
  TITLE     Role of adenine deaminase in purine salvage and nitrogen metabolism
            and characterization of the ade gene in Bacillus subtilis
  JOURNAL   J Bacteriol 178 (3), 846-853 (1996)
   PUBMED   8550522
REFERENCE   4  (residues 1 to 467)
  AUTHORS   Lollier,M., Jaquet,L., Nedeva,T., Lacroute,F., Potier,S. and
            Souciet,J.L.
  TITLE     As in Saccharomyces cerevisiae, aspartate transcarbamoylase is
            assembled on a multifunctional protein including a
            dihydroorotase-like cryptic domain in Schizosaccharomyces pombe
  JOURNAL   Curr Genet 28 (2), 138-149 (1995)
   PUBMED   8590465
REFERENCE   5  (residues 1 to 467)
  AUTHORS   Jabri,E., Carr,M.B., Hausinger,R.P. and Karplus,P.A.
  TITLE     The crystal structure of urease from Klebsiella aerogenes
  JOURNAL   Science 268 (5213), 998-1004 (1995)
   PUBMED   7754395
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01979.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Pseudomonas lopnurensis"
                     /db_xref="taxon:1477517"
     Protein         1..467
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=49646
     Region          34..459
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
     Site            order(96,98,249,272,322)
                     /site_type="active"
                     /db_xref="CDD:238617"
ORIGIN      
        1 mclslirpcc ptlasgalwl vallagsfqs qaqprallie gaqvisldpq lgdlpradvl
       61 lrdgriaevg aqlsdaeaqr idgrgklllp glvdththlw lsatrgqfrn tpqtdyfllk
      121 khlarhytae dirigtafga leslaagvtt sveffhnlrg pehlqaslqa lrdsgirarl
      181 lygahddlpd drsidlehla rvardwpegr islglgwrgv gsgedanvqa vgrreieaar
      241 rlglpvsvhs ggarnaalva sgllgpdvqi vhatgatreq laafrqaras lsltpvteqr
      301 vgygltrlsd yaavgriglg idgpalagsa dlfanmrlla ltesgalrae taveprrile
      361 latleaarsl glqdeigsit pgkradlill dldalnlarp gatdpvalvv ysampanvdt
      421 vivdgivrkr dgrlldldlp rlldevrgsl eaileraggl ppapday
//
LOCUS       WP_235989192             178 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Pseudomonas lopnurensis].
ACCESSION   WP_235989192
VERSION     WP_235989192.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas lopnurensis
  ORGANISM  Pseudomonas lopnurensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 178)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Pseudomonas lopnurensis"
                     /db_xref="taxon:1477517"
     Protein         <1..178
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          2..161
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 vdllyklknm eldailisld dslinsdceq lllfaddifl avptdspfad qaevdladlr
       61 datfitltqg fathrdsarv fsqagfepnv gmqvndiftl lsmvssgvgy allpgrvaav
      121 yenrirlipl qaryrlqqqi gvvflkakeh dpnllalvae crmyrpkshr vsgppenh
//
LOCUS       WP_235989214             118 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Pseudomonas lopnurensis].
ACCESSION   WP_235989214
VERSION     WP_235989214.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas lopnurensis
  ORGANISM  Pseudomonas lopnurensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 118)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Pseudomonas lopnurensis"
                     /db_xref="taxon:1477517"
     Protein         1..118
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=12660
     Region          <11..94
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mcrkyrhccy dfgtgyasla ylprfrvggi kidrkfvagl pdseqsvala rgiltmashl
       61 glhgvaegve terqaafcgs maapayarpl paeqcrwrag arcrstcscr ctaepgtp
//
LOCUS       WP_235989220             305 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Pseudomonas
            lopnurensis].
ACCESSION   WP_235989220
VERSION     WP_235989220.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas lopnurensis
  ORGANISM  Pseudomonas lopnurensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 305)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Pseudomonas lopnurensis"
                     /db_xref="taxon:1477517"
     Protein         1..305
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=33365
     Region          1..>104
                     /region_name="leuO"
                     /note="leucine transcriptional activator; Reviewed;
                     PRK09508"
                     /db_xref="CDD:181918"
     Region          101..298
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(116..117,119..120,123,127,129..135,223..228,
                     234..235,237..238)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176102"
ORIGIN      
        1 mnrndlrrvd lnllivfetl mhersvtraa eklflgqpai saalarlrtl fddplfvrtg
       61 rsmeptaraq eiaqllspal dsistavsra stfdpatstq vfrigltdev efallppllr
      121 rlraeapdvv lvvrranyll mpgllasgei svgvcyteel panakrkvlr rpkpmllrad
      181 sipgrlsmed ycarphamvs fagdlngyid eelalhgckr kvvlavpqfn glaallagtd
      241 iiatvpdyaa aalaanggvr aeplpfetsq dfelsmawrg aqdndpaerw lrsriqmfvg
      301 dpdsl
//
LOCUS       WP_235989240            1175 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase [Psychroserpens algicola].
ACCESSION   WP_235989240
VERSION     WP_235989240.1
KEYWORDS    RefSeq.
SOURCE      Psychroserpens algicola
  ORGANISM  Psychroserpens algicola
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Psychroserpens.
REFERENCE   1  (residues 1 to 1175)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1175
                     /organism="Psychroserpens algicola"
                     /db_xref="taxon:1719034"
     Protein         1..1175
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=134664
     Region          29..458
                     /region_name="G6S_like"
                     /note="unchracterized sulfatase homologous to glucosamine
                     (N-acetyl)-6-sulfatase(G6S, GNS); cd16031"
                     /db_xref="CDD:293755"
     Site            order(39..40,79,129,131,203,305..306)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293755"
     Site            order(39..40,79,129,131,203,306)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293755"
     Region          729..1073
                     /region_name="Bac_rhamnosid6H"
                     /note="Bacterial alpha-L-rhamnosidase 6 hairpin
                     glycosidase domain; cl46875"
                     /db_xref="CDD:481215"
     Region          1075..1142
                     /region_name="Bac_rhamnosid_C"
                     /note="Bacterial alpha-L-rhamnosidase C-terminal domain;
                     pfam17390"
                     /db_xref="CDD:379972"
ORIGIN      
        1 mfknsyllvl lgvvcslnma naqqqtktek pniifiltdd qrfdaigyag nkyvetpemd
       61 klaesgtyfn saivttpica asrasiltgl qerahnfnfq tgnirseymd esyptvlknn
      121 gyhtgfygky gvryddldkq fdefesydrn nrykdrrgyy yktldndtvh ltrytgqkal
      181 dfidnnatne kpfclslsfs aphahdgape qyfwqnttdk llenttipgp elgddkyfna
      241 qpeivkkgfn wlrwtwrydt pekyqhslkg yyrmisgidl eiakiraklk ekgldkntvi
      301 ivmgdngyfl gerklagkwl mydnsirvpl ivfdprvnth qdindmvlni dvpqtiadla
      361 gvkapeswqg kslmpivnke antiardtil iehlwdfeei ppsegvrtkk wkyfryvndk
      421 sieelydlek dpqeiknlvg kkkyrdildn lraktdelik knsneyraap tdltvelire
      481 pskdvkifdl kpefgwtvpl gakyqgayqi lvssnkthid nnngdvwdsg rvasikstnv
      541 eyegkalevg ktyywkvriw deanrlvdya daqkfttgks dsyiistenk fvttevkpvk
      601 fekrgdfyfi dfgkaafatm dfsynaktph tltihvgema ndkgnlnrtp pkksniryqe
      661 ikvdvkpgqt kyqikvhede rntrankavp lpngfpplvp fryaeiegaq ndvkaedftq
      721 lafhtywdee assfesnnei lnqvwdlcky sikattfngl yvdgdrerip yeadaylnql
      781 shyttdreya igrrtieyfm knptwptewq qhvplliyad ymytgnteli eryyealkhk
      841 slfelsnedg litstkvdae fmkklgfpeg ykkpltdivd wpgpnfngsk tkgerdgfvf
      901 kpystvinsf fyenmkimae fakilgktqe amdfeyraak akkavneqmf daergiyvdg
      961 igtdhaslha nmmplafglv peehfesvvn yvksrgmacs vygaqflmdg lynageadya
     1021 ldlltdtsdr swynmikigs titleawdnk yknnldwnha wgavpanvip rglwgikpkt
     1081 pgfgiatikp qmsklkssei evptvrgtik akytyngarl qtyeieipgn mvaeftlngl
     1141 dgkdlihnge kvpsafesir ltpgkhtiql kinsf
//
LOCUS       WP_235989296             260 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxypeptidase-like regulatory domain-containing protein
            [Psychroserpens algicola].
ACCESSION   WP_235989296
VERSION     WP_235989296.1
KEYWORDS    RefSeq.
SOURCE      Psychroserpens algicola
  ORGANISM  Psychroserpens algicola
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Psychroserpens.
REFERENCE   1  (residues 1 to 260)
  AUTHORS   Cho,K.H. and Salyers,A.A.
  TITLE     Biochemical analysis of interactions between outer membrane
            proteins that contribute to starch utilization by Bacteroides
            thetaiotaomicron
  JOURNAL   J Bacteriol 183 (24), 7224-7230 (2001)
   PUBMED   11717282
REFERENCE   2  (residues 1 to 260)
  AUTHORS   Shipman,J.A., Berleman,J.E. and Salyers,A.A.
  TITLE     Characterization of four outer membrane proteins involved in
            binding starch to the cell surface of Bacteroides thetaiotaomicron
  JOURNAL   J Bacteriol 182 (19), 5365-5372 (2000)
   PUBMED   10986238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025092.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13715.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Psychroserpens algicola"
                     /db_xref="taxon:1719034"
     Protein         1..260
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /calculated_mol_wt=29322
     Region          129..>218
                     /region_name="OMP_RagA_SusC"
                     /note="TonB-linked outer membrane protein, SusC/RagA
                     family; TIGR04056"
                     /db_xref="CDD:274948"
ORIGIN      
        1 mrtslhinip kpcqedwnqm tpqdkgrhcn scqktvfdft natdetivka fqsepklcgr
       61 fkssqlnrel vlsrkekrny isfvastlfa flsfgtqele aqgkpkvvki dsiqssirgk
      121 vgisvlkkkv ivgtvvsdad glplpgasir ikgtnkgvqt dfdghykikv dvgdtlvfty
      181 vgniteahvi tnkstvdirm kedftqlect fvgfptakdy rdcekekrng hrknirnghi
      241 ertnvgqfly nitnifrrkk
//
LOCUS       WP_235989322             598 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Psychroserpens
            algicola].
ACCESSION   WP_235989322
VERSION     WP_235989322.1
KEYWORDS    RefSeq.
SOURCE      Psychroserpens algicola
  ORGANISM  Psychroserpens algicola
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Psychroserpens.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Psychroserpens algicola"
                     /db_xref="taxon:1719034"
     Protein         1..598
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=68556
     Region          6..128
                     /region_name="TolBN"
                     /note="TolB amino-terminal domain (function unknown)
                     [Signal transduction mechanisms]; COG5616"
                     /db_xref="CDD:444347"
     Region          173..>357
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          230..259
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(231,234..235,238..239,241,266,269..270,273..274,
                     276..277,300,303..304,307..308,311)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          264..294
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          299..327
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <402..598
                     /region_name="AraC"
                     /note="AraC-type DNA-binding domain and AraC-containing
                     proteins [Transcription]; COG2207"
                     /db_xref="CDD:441809"
ORIGIN      
        1 mpipsksiav lpfvnmssda dndyfcdgit eeiinaltki ehlkviarts sfafkgksid
       61 ireigkqlev ntilegsikk yqervritaq lidvedgthy wskrfdrelv difeledeis
      121 lliadkiren fghlefgeql aehpnistqa yqdflkaknl iaqfnkdsil kgitilnhii
      181 eefpnfalah vnihyaynsm aagglmpvke afeigeihlk kshqlnvnip evyhslgwda
      241 lnkkwdfkta ashlkkalql kpgysdahqk lfitlilegn ledanfhilk ayaldplndl
      301 nnyfmgynay inkdreaiit yfekcfeinn kfivgygiya lalafqnrpy eiirvansip
      361 emegstmeql imttiancll qenskvetnl nsltpllnsd srervrffli yiytllkqyd
      421 daldlidegi ihkeplmtll kvdpllkplh aierfnkqiq tiftlsnqsq skievvekql
      481 lsqdqiadyr qaimslmeed kcfldtalsl rtlaskinih pnhlswllna sfkknfndfi
      541 nsyrlayfks ialkpefkhi tilglaydsg fnsksvfntf fkknegitps kwvqqhan
//
LOCUS       WP_235989327             420 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase family 17 protein [Psychroserpens algicola].
ACCESSION   WP_235989327
VERSION     WP_235989327.1
KEYWORDS    RefSeq.
SOURCE      Psychroserpens algicola
  ORGANISM  Psychroserpens algicola
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Psychroserpens.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012552.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00332.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Psychroserpens algicola"
                     /db_xref="taxon:1719034"
     Protein         1..420
                     /product="glycosyl hydrolase family 17 protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=47662
     Region          40..>380
                     /region_name="Scw11"
                     /note="Exo-beta-1,3-glucanase, GH17 family [Carbohydrate
                     transport and metabolism]; COG5309"
                     /db_xref="CDD:444107"
ORIGIN      
        1 mfaillvlsc qtsinkdnns vanknqpnln akdilghpey laisyggyrt tsrddqpsin
       61 dlkedmliln amgvkilrty nvhldqaanv leairqlkde nanfemyvml giwidcknaf
      121 nwdnvkpdhn qesernpvev qtavtlakky peivkilavg neamvkwata yyvqpgvilk
      181 wvnhlqalkk sgelpkdlwi tssdnfaswg ggdseyhved leklihavdy ismhtypmhd
      241 thyhpvfwgi setetntskk vkidsvmlra kvyamsqyea vktymkslgv dkpihigetg
      301 wasysgglyg nngskatdey kealyyqhmr ewtnkagmsc fyfeafdehw kdaenpkgse
      361 nhfglftidg kakyalwdlv dkglfkgltr ngnpitktyn gnidelmkev mipelkpqsk
//
LOCUS       WP_235989344            1148 aa            linear   BCT 02-MAR-2025
DEFINITION  PKD domain-containing protein, partial [Psychroserpens algicola].
ACCESSION   WP_235989344
VERSION     WP_235989344.1
KEYWORDS    RefSeq.
SOURCE      Psychroserpens algicola
  ORGANISM  Psychroserpens algicola
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Psychroserpens.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040138.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18911.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Psychroserpens algicola"
                     /db_xref="taxon:1719034"
     Protein         1..>1148
                     /product="PKD domain-containing protein"
     Region          25..136
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(32,34,36,65,70,104,132,134,136)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          151..221
                     /region_name="PKD_4"
                     /note="PKD domain; pfam18911"
                     /db_xref="CDD:436824"
     Region          322..445
                     /region_name="P_proprotein"
                     /note="Proprotein convertase P-domain; pfam01483"
                     /db_xref="CDD:460225"
     Region          535..>1068
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
ORIGIN      
        1 mkkalliift lisvhtyaqd vlmqngtvna csgtfydsgg pggaygsden lvlticpena
       61 gqlvqlnfta fntqlgadvm tiyngdstas pafgtfdgan npgfvtatdd ngsgcltief
      121 vsdgagtttg waaeiscftp cqvitsqidt aspapngdgy irvcpnqeit ltgsgnfevd
      181 gtgatyewdl dngnfvtgqt atfsyplpgv yivnlnirda ntdsdplgcp ntnlinqviq
      241 vatepsfigt qaaddtlcfg etttiegvvn avpfvndctp pvsgttflpd gsgavyttci
      301 tvdcfesdql ltdpnqliei cvnmehsysg dldikiispn gqeadlfvqa gggtyfggan
      361 ddnsntpgvg adycfsmsas vllanantit agsnppnnsw epgtylpves fnelvgspln
      421 gdwcieivdn lsidngyifs wglnfdpniq ppelsftpvi tseawdtdpt itdvtgntit
      481 vappaagtyc ytyrvmddfg ceyteevcit meeeitadvt avvnpicegd daeflitgtp
      541 natinytina gavqtmtlda agsatvtitg ptvdqvfnli dvtvgactvt lndtetiivg
      601 qvfdtsffmt ptcdgataiv tgdvggvfaf adpqptdgam idsatgtitn gvsgttyivv
      661 yefasscspg dtetvtvlps qdagftltpt cdgatatitg dmggvftfnp iptdgamidl
      721 ltgtitngtq gatytveysv agacpatste svtvlafeda sftltptceg atavilgdtg
      781 gsfafnpvpt dgatidentg litgvsgtty tveyttsgpc pettnqsvtv fpledasfty
      841 apgcegatat itgdtggvfa fvdpqptdga tidpatgeil ngvpgttyti eyttsgncpa
      901 sssvavtifs lddssftmsp tcdgaiatit gltggtfafd pvptdgavid antgtvtnap
      961 fdatytieyt tngtcpttst qtftvfsqpi vvdptplevc ddgtpdgits idlslknvei
     1021 tgnnsnysvs yhftqldadm nsnpltipyt ntvngqivfv rvqdintgcy dtttlelive
     1081 qapiantptp leycdpdsdg fgvfdltskd ieitggdpsl svsyhetmad adnnvnalts
     1141 pynnived
//
LOCUS       WP_235989359             323 aa            linear   BCT 02-MAR-2025
DEFINITION  YHYH protein [Psychroserpens algicola].
ACCESSION   WP_235989359
VERSION     WP_235989359.1
KEYWORDS    RefSeq.
SOURCE      Psychroserpens algicola
  ORGANISM  Psychroserpens algicola
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Psychroserpens.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025600.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14240.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Psychroserpens algicola"
                     /db_xref="taxon:1719034"
     Protein         1..323
                     /product="YHYH protein"
                     /calculated_mol_wt=35645
     Region          178..>271
                     /region_name="YHYH"
                     /note="YHYH protein; pfam14240"
                     /db_xref="CDD:433802"
ORIGIN      
        1 mkhlvaivai sliisscksn qktdnqttqn tdnkelaiki kpvntdyfit eniigeisee
       61 kvdlrgietl cyviktnsqa sehqmgpwcp rhiddgieka giwfdngkvy dvsghfianl
      121 defydddkwk lykddgsikv tdteeaclsa akpnvdedyh nycveclpey fknqittyyi
      181 pvtptyqnss qrfgrggigl afngvkfdpp apthailaah tiaplddhgg hvnphggyhy
      241 havtgstkei tqsdthapmi gyaidgfgiy alldkngtqp sdldecgghs dnergyhyha
      301 gapgdnqiik clhgtpgrid lqe
//
LOCUS       WP_235989539             131 aa            linear   BCT 02-MAR-2025
DEFINITION  TetR/AcrR family transcriptional regulator C-terminal
            domain-containing protein [Streptomyces ureilyticus].
ACCESSION   WP_235989539
VERSION     WP_235989539.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces ureilyticus
  ORGANISM  Streptomyces ureilyticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 131)
  AUTHORS   Hinrichs,W., Kisker,C., Duvel,M., Muller,A., Tovar,K., Hillen,W.
            and Saenger,W.
  TITLE     Structure of the Tet repressor-tetracycline complex and regulation
            of antibiotic resistance
  JOURNAL   Science 264 (5157), 418-420 (1994)
   PUBMED   8153629
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014906.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02909.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Streptomyces ureilyticus"
                     /db_xref="taxon:1775131"
     Protein         1..131
                     /product="TetR/AcrR family transcriptional regulator
                     C-terminal domain-containing protein"
                     /GO_process="GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /calculated_mol_wt=14335
     Region          2..126
                     /region_name="TetR_C_33"
                     /note="Tetracyclin repressor-like, C-terminal domain;
                     cl38988"
                     /db_xref="CDD:476841"
ORIGIN      
        1 mrrvlsrhrw aiglmesras pgpetlrhhd avlgclrkag fsvaltahay saldsyiygf
       61 alqerdlpfd tpdktaelaq ailaqvpadq yphlaeltte hilspgydcs nefefgldli
      121 ldglqragqa t
//
LOCUS       WP_235989709             142 aa            linear   BCT 02-MAR-2025
DEFINITION  MarR family transcriptional regulator [Streptomyces ureilyticus].
ACCESSION   WP_235989709
VERSION     WP_235989709.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces ureilyticus
  ORGANISM  Streptomyces ureilyticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 142)
  AUTHORS   Alekshun,M.N., Levy,S.B., Mealy,T.R., Seaton,B.A. and Head,J.F.
  TITLE     The crystal structure of MarR, a regulator of multiple antibiotic
            resistance, at 2.3 A resolution
  JOURNAL   Nat Struct Biol 8 (8), 710-714 (2001)
   PUBMED   11473263
REFERENCE   2  (residues 1 to 142)
  AUTHORS   Sulavik,M.C., Dazer,M. and Miller,P.F.
  TITLE     The Salmonella typhimurium mar locus: molecular and genetic
            analyses and assessment of its role in virulence
  JOURNAL   J Bacteriol 179 (6), 1857-1866 (1997)
   PUBMED   9068629
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024212.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12802.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Streptomyces ureilyticus"
                     /db_xref="taxon:1775131"
     Protein         1..142
                     /product="MarR family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=15444
     Region          1..137
                     /region_name="MarR"
                     /note="DNA-binding transcriptional regulator, MarR family
                     [Transcription]; COG1846"
                     /db_xref="CDD:441451"
ORIGIN      
        1 meivhllrav tvelglhsar fashngmhpt dvralielmd asradeemta grlgtalgln
       61 sagttslldr legaghvrrv rgrqdrrkvv vevderavel gwsffgplig kavellqncd
      121 erereairgf legmreasag ge
//
LOCUS       WP_235989747             132 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Streptomyces ureilyticus].
ACCESSION   WP_235989747
VERSION     WP_235989747.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces ureilyticus
  ORGANISM  Streptomyces ureilyticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 132)
  AUTHORS   Mullin,D.A., Zies,D.L., Mullin,A.H., Caballera,N. and Ely,B.
  TITLE     Genetic organization and transposition properties of IS511
  JOURNAL   Mol Gen Genet 254 (4), 456-463 (1997)
   PUBMED   9180700
REFERENCE   2  (residues 1 to 132)
  AUTHORS   Fischer,J., Maier,H., Viell,P. and Altenbuchner,J.
  TITLE     The use of an improved transposon mutagenesis system for DNA
            sequencing leads to the characterization of a new insertion
            sequence of Streptomyces lividans 66
  JOURNAL   Gene 180 (1-2), 81-89 (1996)
   PUBMED   8973350
REFERENCE   3  (residues 1 to 132)
  AUTHORS   Zekri,S. and Toro,N.
  TITLE     Identification and nucleotide sequence of Rhizobium meliloti
            insertion sequence ISRm6, a small transposable element that belongs
            to the IS3 family
  JOURNAL   Gene 175 (1-2), 43-48 (1996)
   PUBMED   8917074
  REMARK    Erratum:[Gene 1997 Mar 25;188(1):149]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01527.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Streptomyces ureilyticus"
                     /db_xref="taxon:1775131"
     Protein         1..132
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=14030
     Region          1..88
                     /region_name="InsE"
                     /note="Transposase InsE and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2963"
                     /db_xref="CDD:442203"
ORIGIN      
        1 maskkrlyda efregavriv letgksipev aadlgihsgt lhswvsrarr ngspssdrpv
       61 aeaspggrlr eseraeldgl raearetrta aragaghtda hsthsaltgv sllrsllrpa
      121 plpgirrhra aq
//
LOCUS       WP_235989921             598 aa            linear   BCT 02-MAR-2025
DEFINITION  thioredoxin-like domain-containing protein [Bremerella alba].
ACCESSION   WP_235989921
VERSION     WP_235989921.1
KEYWORDS    RefSeq.
SOURCE      Bremerella alba
  ORGANISM  Bremerella alba
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Bremerella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025273.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13905.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Bremerella alba"
                     /db_xref="taxon:980252"
     Protein         1..598
                     /product="thioredoxin-like domain-containing protein"
                     /calculated_mol_wt=65901
     Region          <71..592
                     /region_name="PLN02919"
                     /note="haloacid dehalogenase-like hydrolase family
                     protein"
                     /db_xref="CDD:215497"
ORIGIN      
        1 mpylhfspkf ilrklamfaa vlllvgcgss sshpfamaee qqpvaakeka addtpdaked
       61 dhpfraripa pefpqdmewm ntkeplelee lkgkfvlldf wtyccincih ilpelkkleh
      121 efpnqlvvig vhsakfdtek eakniseail ryeiehpvvn ddemkiwnsf svsswptmyl
      181 idpegnvvyl rrgefkaddi revlnrampy yrengsldet piqfdllayd qqptqlrfpg
      241 kvladeksnr lfisdsnhnr ivitsldgel qevigsgeig sadgayesaq fdhpqgmalk
      301 qdtlyvadte nhlirkidlk ekqvstiagv geqaknnwpg vgedatlssl pkrfvgtpkt
      361 tpinspwalw phgdslyiam agphqiwkmk ldeseigpya gngredivdg pllpsipyqq
      421 ghssfaqpsg ltsdgkslfv adsegssira vpfdpegsvr tvigtahlpy grlfsfgdvd
      481 gpaktaklqh algvtyvdgi iytvdtynnk ikavdattgn vttiagtsep gtaddpaqfd
      541 eptgishagg klyiadtnnh lirvmdlesk kvstlqikgl kpmpakkrpe alpgaiqk
//
LOCUS       WP_235990124             729 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 N-terminal domain-containing protein
            [Streptomyces ureilyticus].
ACCESSION   WP_235990124
VERSION     WP_235990124.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces ureilyticus
  ORGANISM  Streptomyces ureilyticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 729)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00933.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Streptomyces ureilyticus"
                     /db_xref="taxon:1775131"
     Protein         1..729
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=76254
     Region          77..700
                     /region_name="PRK15098"
                     /note="beta-glucosidase BglX"
                     /db_xref="CDD:185053"
ORIGIN      
        1 mtlrekvgql nqrmygwnay rrtrsgfelt ealhaeterf aglgalygll radawsgvdh
       61 atgagaadsa aladlvqrhv vgesrlgipa lfveevphgh maldgtvfpv nlavgatwdp
      121 elyeqaaaha avelrsrgah lalvsaldia rdprwgrtee cfgedpylas rltealvrgm
      181 qgnpgelfap dkapvvlkhf agqgatiggr nsaeselgar elheihlpaa ragvragaaa
      241 vmaaynevdg mpcagnpall tellrerwef eglvmadgla vdrlaritgd kvsagalaln
      301 sgvdlslwde gfthlgeave rglvreetld aavtrvlhlk frlglferpy aadqlatsrt
      361 ppaaaaapat agrdlstala raaitllhnn galpipstat riavlgpqaa ttahqlgdyt
      421 apqrpgtgts vlaglrrfaa pgveitharg caltggdtsg ipeavalaga adlavvalgg
      481 ssartpetdf aangaaqqas sqmtcgegvd laglrlgeaq yallravsat gtpavvvlvq
      541 grpyavpeaa dlsaalltaw ypgpwggdai aeillghadp sgrlpvsvpr saaqlpvyyn
      601 hkdteygayv desaeplysf ghglsyttfa ygpprlsght vavdvtntge rhgrtvvqly
      661 vrrlltsvwp rtlelcafea vtlaagelrt vtlhldpdql agtgtaeirv aesaraalta
      721 vpvvlrltr
//
LOCUS       WP_235989988             296 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5134 domain-containing protein [Streptomyces ureilyticus].
ACCESSION   WP_235989988
VERSION     WP_235989988.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces ureilyticus
  ORGANISM  Streptomyces ureilyticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 296)
  AUTHORS   Tuske,S., Sarafianos,S.G., Wang,X., Hudson,B., Sineva,E.,
            Mukhopadhyay,J., Birktoft,J.J., Leroy,O., Ismail,S., Clark,A.D.
            Jr., Dharia,C., Napoli,A., Laptenko,O., Lee,J., Borukhov,S.,
            Ebright,R.H. and Arnold,E.
  TITLE     Inhibition of bacterial RNA polymerase by streptolydigin:
            stabilization of a straight-bridge-helix active-center conformation
  JOURNAL   Cell 122 (4), 541-552 (2005)
   PUBMED   16122422
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028506.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17197.9
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Streptomyces ureilyticus"
                     /db_xref="taxon:1775131"
     Protein         1..296
                     /product="DUF5134 domain-containing protein"
                     /calculated_mol_wt=30455
ORIGIN      
        1 mgilalswai alvsalvaav savrmvttsg etrfaaggdl lmglcmatma lpatvgwyag
       61 ygmwwavafg ilglggvama vkharaggwk hgrhwvhliv gsfgmvimtl amtstssgpv
      121 lalggghsma hmpgmentas atrthemagm dhtngmgsth dtgsmhgmdm pgmtsaaada
      181 gssagsssvw rfvvaalavy fllsigasvw arirgtrrgg rgagsrggwg rwllampdtv
      241 lvylasltls vwdrtrpgqr sghgrrrklg aahdaalaah igmggtmsam llmmav
//
LOCUS       WP_235990231            1249 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase [Bremerella alba].
ACCESSION   WP_235990231
VERSION     WP_235990231.1
KEYWORDS    RefSeq.
SOURCE      Bremerella alba
  ORGANISM  Bremerella alba
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Bremerella.
REFERENCE   1  (residues 1 to 1249)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1249
                     /organism="Bremerella alba"
                     /db_xref="taxon:980252"
     Protein         1..1249
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=139962
     Region          430..511
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          501..578
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          567..631
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          794..1231
                     /region_name="iduronate-2-sulfatase"
                     /note="cd16030"
                     /db_xref="CDD:293754"
     Site            order(803..804,842,893,895,985,1084..1085)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293754"
     Site            order(803..804,842,893,895,985,1085)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293754"
ORIGIN      
        1 mleeptlllk rttafallll avccgesqvn adddlatvky rnpglkvdlg vglwawpmpm
       61 dwdgdgdtdl vvscpdvpfn gmylfenpgd dgksptfkpp vkigpgmhsv hvsyvdgkpr
      121 vlspgtewvn flgkefretk siyptknvhp nrvranqwry vdydndgatd lligvgdwke
      181 ygwddafdde gnwtrgplhg yvylvrntgt tdkptyakpt rleadgqpvd vfgmpspnla
      241 dfdgdgdldl lcgefldgft yfqnigtrer pkfatgkrln feghplamdl qmitptafdw
      301 dqdgdwdliv gdedgrvalv entgqvidgl pqflppkyfq qeadalkfga latpvsvdwd
      361 rdgdddiitg nsagniaffe nldggnppkw adakllkvgg kpirpqagpn gsiqgpaeak
      421 wgyttlsvad wdhdgkddlm vnsiwgkiqw yrntgsvdel aeakpvevew tgtpphpawn
      481 wwkpdgkqla tqwrttpvvi dldkdglndl vcldhegyla wfqrekagdq lvlrpgkrif
      541 tnrrgeplrl naknaggsgr rkicfadwdg dgkldlllns rsidlmrnvs tqdkpwafda
      601 pvqvhphrla ghttsptivd wnqdnrpdlf vgaedghfyl lennwkpyea kkvgsvever
      661 rkislhpfdn gskaygnrpy vwesvpkrfq gwqflrgngg esepafvtat enatvylais
      721 asvkpselpe wklvegavfh ytdggstkmr iyecdlstgd riaipqltwt ggilllpptp
      781 erksnesaqs vpgkpnvlfi vvddlrvqlg cygdsiadtp nidalaargm lfrqafcqqa
      841 lcnpsrasvm tgrypdslgi wnlathfret hpnvvtlper fkregyftqn igkvfhnyrq
      901 eiqndeqsws vpakydwgah sndwyvdgep femhqvpkgp siqkvdvpde ayldgriana
      961 aveaiqqraq dnrpfflavg fwkphlpfna pqkywdlydf eeiaqqtktl ptsdapeial
     1021 hdsrevrgyt diprkgdisr evnlrlnhgy yaaisfldaq igkvldelek eglakdtivv
     1081 lwsdhglhlg ehdlwcktsn feldarvpli isqpgmttsg kqsnslvelv dlyptllqlc
     1141 gispppsveg ktlvpiienh kavvrngalt qhprpayyrg kpevmgyslr tsdfrytewr
     1201 dfktgkinav elydhkrdpq esanvanesp yqaarqtlse qlatrlnrn
//
LOCUS       WP_235990234             768 aa            linear   BCT 02-MAR-2025
DEFINITION  exo-beta-N-acetylmuramidase NamZ domain-containing protein
            [Bremerella alba].
ACCESSION   WP_235990234
VERSION     WP_235990234.1
KEYWORDS    RefSeq.
SOURCE      Bremerella alba
  ORGANISM  Bremerella alba
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Bremerella.
REFERENCE   1  (residues 1 to 768)
  AUTHORS   Muller,M., Calvert,M., Hottmann,I., Kluj,R.M., Teufel,T.,
            Balbuchta,K., Engelbrecht,A., Selim,K.A., Xu,Q., Borisova,M.,
            Titz,A. and Mayer,C.
  TITLE     The exo-beta-N-acetylmuramidase NamZ from Bacillus subtilis is the
            founding member of a family of exo-lytic peptidoglycan
            hexosaminidases
  JOURNAL   J Biol Chem 296, 100519 (2021)
   PUBMED   33684445
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018743.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07075.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Bremerella alba"
                     /db_xref="taxon:980252"
     Protein         1..768
                     /product="exo-beta-N-acetylmuramidase NamZ
                     domain-containing protein"
                     /GO_function="GO:0033922 - peptidoglycan
                     beta-N-acetylmuramidase activity [Evidence IEA]"
                     /calculated_mol_wt=83428
     Region          34..374
                     /region_name="AmpC"
                     /note="CubicO group peptidase, beta-lactamase class C
                     family [Defense mechanisms]; COG1680"
                     /db_xref="CDD:441286"
     Region          395..768
                     /region_name="YbbC"
                     /note="Uncharacterized conserved protein YbbC, DUF1343
                     family [Function unknown]; COG3876"
                     /db_xref="CDD:443084"
ORIGIN      
        1 mslrscivvm lflvwslran adlyavppei tgmandittk idqaidnals enkmpgcvvv
       61 vacggkviyk kahgnrrvep svepmtidtv fdmasltkpi vtatsilqlv esgqvdlnap
      121 vanylpefrg hdketitikq llihtsgltp dnalsdyeng wpdaygkicn lkllsvpgdr
      181 frysdvgfil lgevvarvsg kpldlyaaeq ifkplgmses gfnpnaslar ravtttkvng
      241 ewlkgtvhdp rarycdgvag haglfstadd lllfaqamld artpgpnhlf kpqtltaltn
      301 synaagslrg lgwdkqsgys snrgksmsss ayghggftgt alwidpqlel aviflsnrvh
      361 pnekgsvnal agrigtiaad aclkaqktsa lmqtklgvdv ladrqfdllk gkkvglianh
      421 tsrnksgkpt hllfdespev dlvalfspeh gfagsldqsh igdmvdpetg iaikslyget
      481 rkptpkqleg idilvfdiqd igcrfytyis tmglameaaa eqgipfmvld rpnplggdti
      541 egplldrktk sfvafhsipv rhgmtigela kmmnqergwk tdltvvpltg wgrgqllfdt
      601 glpwrntspn mrnltqamiy pgvgllettn vsvgrgtdtp fevlgapwid gpklatlins
      661 hnlpgvkvig veftpassky aeqqcggvnf iitnweafrp ldlgwatass lhalypktwe
      721 terlhvllsn davktsilqt kspqeisasy eknvdefakr repfliyp
//
LOCUS       WP_235990261             231 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Streptomyces ureilyticus].
ACCESSION   WP_235990261
VERSION     WP_235990261.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces ureilyticus
  ORGANISM  Streptomyces ureilyticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 231)
  AUTHORS   Vertes,A.A., Inui,M., Kobayashi,M., Kurusu,Y. and Yukawa,H.
  TITLE     Isolation and characterization of IS31831, a transposable element
            from Corynebacterium glutamicum
  JOURNAL   Mol Microbiol 11 (4), 739-746 (1994)
   PUBMED   8196545
REFERENCE   2  (residues 1 to 231)
  AUTHORS   van der Zee,A., Agterberg,C., van Agterveld,M., Peeters,M. and
            Mooi,F.R.
  TITLE     Characterization of IS1001, an insertion sequence element of
            Bordetella parapertussis
  JOURNAL   J Bacteriol 175 (1), 141-147 (1993)
   PUBMED   8093238
REFERENCE   3  (residues 1 to 231)
  AUTHORS   Johansen,E. and Kibenich,A.
  TITLE     Isolation and characterization of IS1165, an insertion sequence of
            Leuconostoc mesenteroides subsp. cremoris and other lactic acid
            bacteria
  JOURNAL   Plasmid 27 (3), 200-206 (1992)
   PUBMED   1325060
REFERENCE   4  (residues 1 to 231)
  AUTHORS   Cirillo,J.D., Barletta,R.G., Bloom,B.R. and Jacobs,W.R. Jr.
  TITLE     A novel transposon trap for mycobacteria: isolation and
            characterization of IS1096
  JOURNAL   J Bacteriol 173 (24), 7772-7780 (1991)
   PUBMED   1660454
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013753.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01610.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Streptomyces ureilyticus"
                     /db_xref="taxon:1775131"
     Protein         1..231
                     /product="transposase"
                     /calculated_mol_wt=25438
     Region          1..>91
                     /region_name="COG4584"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:443641"
     Region          <79..229
                     /region_name="COG3464"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442687"
ORIGIN      
        1 maatglslsa igrrlqldrk tvwryrhnnl edllasagdr gagvldpftd yvqdrfqagc
       61 tssmqlyrel lalgytggyh vvnryvtsir kgvaiptlav tpsprtitsw imrphetlra
      121 sdsaqletar nacpeiaaac dlareftaml rhrqghllrd wiqkaelsgp eaigifadcv
      181 rqdlpavtag ltlsyssgav eghvnrikti krqmygrasf tllrarillq p
//
LOCUS       WP_235990360             138 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Streptomyces ureilyticus].
ACCESSION   WP_235990360
VERSION     WP_235990360.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces ureilyticus
  ORGANISM  Streptomyces ureilyticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 138)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 138)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Streptomyces ureilyticus"
                     /db_xref="taxon:1775131"
     Protein         1..138
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=15977
     Region          <3..46
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(6,9,32,41)
                     /site_type="active"
                     /db_xref="CDD:271175"
ORIGIN      
        1 mkftphdfrr ifatelvnsg lpihigaall ghlniqttrg yvavfdedvv rhyqehlhhr
       61 rqirpeseyr dttvqewgef eehfdrrkve lgscgrpygt pcrhehaphp mpdaphqped
      121 arparrtrir pswpppag
//
LOCUS       WP_235990579             443 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Bremerella alba].
ACCESSION   WP_235990579
VERSION     WP_235990579.1
KEYWORDS    RefSeq.
SOURCE      Bremerella alba
  ORGANISM  Bremerella alba
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Bremerella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Bremerella alba"
                     /db_xref="taxon:980252"
     Protein         1..443
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47820
     Region          29..>433
                     /region_name="PRK08633"
                     /note="2-acyl-glycerophospho-ethanolamine acyltransferase;
                     Validated"
                     /db_xref="CDD:236315"
ORIGIN      
        1 mdapsnpyes paddgttvti pdrlagdpsf wattatqffg afndnifkql lllvavnqal
       61 qgkgetdyqg lamvvfaapf vlfagptgyl adkfskttii riskvleiva mamgvaaffw
      121 ydqlgmtgll lvlafmgfqs tlfapakygi lpelfhgrdl pkvngvflmt tflaiifgtv
      181 lagilrdslp gmlwmaslvc vavavigtlt tipirrtsra tpnakftmqa igipkktrql
      241 fvqdrsilka llascmfwlc agivqqavns lgkvqlelsd tetswlggai glgiglgcml
      301 agvlssgkie frlvqigawg illclalmal pggnhghllg lwgslpvlvl mgiftgmfsv
      361 piqvylqaka pedqkgqvia emsranwlai flsgflysvf dqvliwgdla rcylfgftll
      421 imlpvalfyh pqsetlesdk dtq
//
LOCUS       WP_235990680             259 aa            linear   BCT 02-MAR-2025
DEFINITION  alcohol dehydrogenase catalytic domain-containing protein
            [Streptomyces ureilyticus].
ACCESSION   WP_235990680
VERSION     WP_235990680.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces ureilyticus
  ORGANISM  Streptomyces ureilyticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 259)
  AUTHORS   Taneja,B. and Mande,S.C.
  TITLE     Conserved structural features and sequence patterns in the GroES
            fold family
  JOURNAL   Protein Eng 12 (10), 815-818 (1999)
   PUBMED   10556240
REFERENCE   2  (residues 1 to 259)
  AUTHORS   Murzin,A.G.
  TITLE     Structural classification of proteins: new superfamilies
  JOURNAL   Curr Opin Struct Biol 6 (3), 386-394 (1996)
   PUBMED   8804825
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08240.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Streptomyces ureilyticus"
                     /db_xref="taxon:1775131"
     Protein         1..259
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /calculated_mol_wt=26983
     Region          15..>224
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
ORIGIN      
        1 meineqqhra eqtvralvqr shrgledltl tadqrrltpg pgeylirvga agvnfadvmq
       61 thgtyaggpq apyvagfeaa geivgigpdv esplrlgthv vgagpgafaq ymtmpaagvl
      121 rvpsgwsdae alglvlnwat alaalkplge iktgdvvlvh aaaggvgqaa vrlarhygar
      181 viatasptkh dtvralgada vldstrpdla eeitrltggv dlvlawnrwd rprsrsacrs
      241 pnpsqdvssc svplpatpl
//
LOCUS       WP_235990974             636 aa            linear   BCT 02-MAR-2025
DEFINITION  redoxin domain-containing protein [Bremerella alba].
ACCESSION   WP_235990974
VERSION     WP_235990974.1
KEYWORDS    RefSeq.
SOURCE      Bremerella alba
  ORGANISM  Bremerella alba
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Bremerella.
REFERENCE   1  (residues 1 to 636)
  AUTHORS   Chae,H.Z., Robison,K., Poole,L.B., Church,G., Storz,G. and
            Rhee,S.G.
  TITLE     Cloning and sequencing of thiol-specific antioxidant from mammalian
            brain: alkyl hydroperoxide reductase and thiol-specific antioxidant
            define a large family of antioxidant enzymes
  JOURNAL   Proc Natl Acad Sci U S A 91 (15), 7017-7021 (1994)
   PUBMED   8041738
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012787.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00578.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Bremerella alba"
                     /db_xref="taxon:980252"
     Protein         1..636
                     /product="redoxin domain-containing protein"
                     /GO_function="GO:0016209 - antioxidant activity [Evidence
                     IEA]"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=69207
     Region          376..498
                     /region_name="CpoB"
                     /note="Cell division protein CpoB, coordinates
                     peptidoglycan biosynthesis and outer membrane constriction
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG1729"
                     /db_xref="CDD:441335"
     Region          500..636
                     /region_name="TrxA"
                     /note="Thiol-disulfide isomerase or thioredoxin
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG0526"
                     /db_xref="CDD:440292"
ORIGIN      
        1 mkshkarwam algvsmvcgt sviaagptae qalqlqpiqe nveyqtpdan qipkcnigae
       61 kvgqatgwvv tgpngerlrv fldtnndkkv dfwayyndgv evyrdidtdf ngkadqyrwl
      121 gmagtrwgld qdedglvdqw kmisaeevsa elveaaktgd adrfaallpn daefkslglt
      181 gqrakevadk vdngaeqfva warqqklidk stkwvhfgat rpgivpagtd gvskdlvvye
      241 naiamldqgg ehgqlelgtl vrigdawrli gaptgtpgad dvaaanpqgy ffsvsysgnp
      301 aagqagmaag seiqeiltkl edldqkmaea ttadqrekla mdrvqvikkv iaaanddemr
      361 enwikqlada lsggiqtgel sqgldqlqsl adevekqapk sdlasyirfr emsagytqqf
      421 qdpkadyaki qeawlakleg fidtypkspd aaeammqlai ahefageedd akkwysrirt
      481 dfsgtilgdk asgairrlda vgqpfvirgt tvdgkkldss gakgsallvh ywatwcepck
      541 edmavirqmq akygargfqv vgvsldssee dlkqflganr lawpqlyeeg gldsryaiem
      601 gvltlpttil vgpdgkvisr slhisqldte lgklik
//
LOCUS       WP_235991019             186 aa            linear   BCT 02-MAR-2025
DEFINITION  TfoX/Sxy family protein [Streptomyces ureilyticus].
ACCESSION   WP_235991019
VERSION     WP_235991019.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces ureilyticus
  ORGANISM  Streptomyces ureilyticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Zulty,J.J. and Barcak,G.J.
  TITLE     Identification of a DNA transformation gene required for com101A+
            expression and supertransformer phenotype in Haemophilus influenzae
  JOURNAL   Proc Natl Acad Sci U S A 92 (8), 3616-3620 (1995)
   PUBMED   7724607
REFERENCE   2  (residues 1 to 186)
  AUTHORS   Williams,P.M., Bannister,L.A. and Redfield,R.J.
  TITLE     The Haemophilus influenzae sxy-1 mutation is in a newly identified
            gene essential for competence
  JOURNAL   J Bacteriol 176 (22), 6789-6794 (1994)
   PUBMED   7961436
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016854.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04993.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Streptomyces ureilyticus"
                     /db_xref="taxon:1775131"
     Protein         1..186
                     /product="TfoX/Sxy family protein"
                     /calculated_mol_wt=20027
     Region          5..>68
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Region          78..186
                     /region_name="TfoX"
                     /note="Transcriptional regulator of competence genes,
                     TfoX/Sxy family [Transcription]; COG3070"
                     /db_xref="CDD:442304"
ORIGIN      
        1 mtidvsaerv iplppeqvag yamdwrhdae wsqgirtael treadggglg vgaeitrtay
       61 flgrridtgs sgvrrtvmay deglaerird rlgadpdite krtfgglafl hrgnmavgvs
      121 gddlmvrvgp dnadaalarp gtrvfdmtgr pmrgwilvdg talteddvlg rwidegrafa
      181 aslppk
//
LOCUS       WP_235991120             362 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Streptomyces ureilyticus].
ACCESSION   WP_235991120
VERSION     WP_235991120.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces ureilyticus
  ORGANISM  Streptomyces ureilyticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Streptomyces ureilyticus"
                     /db_xref="taxon:1775131"
     Protein         1..362
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=34758
     Region          2..334
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(3..4,7,39,89..90,92..94,97,116,119..120,123,196,
                     199..200,203..205,208,235,239,288..289,293,297,309,
                     312..313,316..317,320)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mvmavwgarm pavqqaahls tahlalvlla aalgmvaglq iagrlagpar lpalltlgas
       61 slagclallg qcdslpsllt aalafgvahg vldvaansaa vrcqnaagrp imsglhaays
      121 lgalggaala aftahtahst lflgvglilm gatlaavpat rslsgtdhss tpanrthged
      181 rsalpagklw llgalaaatl lgegaaadwa avhlhslgas taasaaafal ysaamatgrl
      241 tgdrltaafg aptvvragav aaaaglltgv assstpgala gwavfglgls ltvpclitaa
      301 gvggprsvat vavtgylgll agpaligala svttlstall lpallaaava alshralehp
      361 tp
//
LOCUS       WP_235991170             284 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Streptomyces
            ureilyticus].
ACCESSION   WP_235991170
VERSION     WP_235991170.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces ureilyticus
  ORGANISM  Streptomyces ureilyticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 284)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Streptomyces ureilyticus"
                     /db_xref="taxon:1775131"
     Protein         1..>284
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          4..128
                     /region_name="NRPS-para261"
                     /note="non-ribosomal peptide synthase domain TIGR01720"
                     /db_xref="CDD:273774"
     Region          138..>284
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mnpgtapvla gydrpqiafn ylgrfdtale ggqsvesqlg ggadpgmgla htleisasah
       61 gsaegvrlda vwswpqevld rdevaelagl wvrmlevlag haalpeaggh spsdfplvtl
      121 eqeqldgwag egmavedvlp lsplqegllf halfdenaad iynvqlvldl agvldagvlr
      181 rsaevlvarh aslracfrqr nngesvqvit gnpvlpwrev dlsgfpeagq rervtrllee
      241 eqaarfdmas aplmrflvir lapdrhklvi tnhhilldgw stpl
//
LOCUS       WP_235991171             283 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Streptomyces
            ureilyticus].
ACCESSION   WP_235991171
VERSION     WP_235991171.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces ureilyticus
  ORGANISM  Streptomyces ureilyticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 283)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Streptomyces ureilyticus"
                     /db_xref="taxon:1775131"
     Protein         1..>283
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..>282
                     /region_name="PRK12316"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237054"
ORIGIN      
        1 mnalpddgfg ygllrylnpg tapvlagydr pqiafnylgr fdtaleggqs vesqlgggad
       61 pgmglahtle inaiahgsae gvrldavwsw pqevldrdev aeladlwvrm lgvlaghaal
      121 peagghspsd fplvtleqeq ldgwagegmv vedvlplspl qegllfhalf dedavdvynv
      181 qlafdlsgal dagvlrrsae vlvgrhaslr acfrerenge pvqviagsvs vpwrvvdlse
      241 ysgagqgerv arlleeeraa rfdmasaplm rflvirlapd rhk
//
LOCUS       WP_235991174             221 aa            linear   BCT 02-MAR-2025
DEFINITION  protein phosphatase 2C domain-containing protein, partial
            [Streptomyces ureilyticus].
ACCESSION   WP_235991174
VERSION     WP_235991174.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces ureilyticus
  ORGANISM  Streptomyces ureilyticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 221)
  AUTHORS   Das,A.K., Helps,N.R., Cohen,P.T. and Barford,D.
  TITLE     Crystal structure of the protein serine/threonine phosphatase 2C at
            2.0 A resolution
  JOURNAL   EMBO J 15 (24), 6798-6809 (1996)
   PUBMED   9003755
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025053.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13672.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Streptomyces ureilyticus"
                     /db_xref="taxon:1775131"
     Protein         1..>221
                     /product="protein phosphatase 2C domain-containing
                     protein"
     Region          34..>188
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cl00120"
                     /db_xref="CDD:469621"
ORIGIN      
        1 mppadpddld dlvadtvldg ahygactlra asvrgdsary rgeprrdsll tarfgtgeqa
       61 lvlvamatga ratpgahlaa aeacqwiara vgrshgrlve diraarrgdl ksglhrltdr
      121 slgklrataa eqgidpeeyt aslrclllpa dpecrtrvff gigegglfrl rdgafqdiep
      181 qvtettgeav vgfgsppset pegdrltmdl gittppspye p
//
LOCUS       WP_235991180             173 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Streptomyces
            ureilyticus].
ACCESSION   WP_235991180
VERSION     WP_235991180.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces ureilyticus
  ORGANISM  Streptomyces ureilyticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 173)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Streptomyces ureilyticus"
                     /db_xref="taxon:1775131"
     Protein         <1..>173
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..>172
                     /region_name="EntF"
                     /note="seryl-AMP synthase component of non-ribosomal
                     peptide synthetase [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG1020"
                     /db_xref="CDD:440643"
ORIGIN      
        1 rvqeeqsrls dhqylgltdi qglvgegelf dtlyvfenyp igvegddvpg gltiiggegr
       61 ddvhypvslv vlpgetlrld lghdtdlfde aaaqrmverl chvveamvsd adqrigdidi
      121 lqpeertrll aeyndtglpv pqatvpelfq aqaaltphai avtdgntsvs ygn
//
LOCUS       WP_235991248             203 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4823 domain-containing protein [Halopseudomonas xiamenensis].
ACCESSION   WP_235991248
VERSION     WP_235991248.1
KEYWORDS    RefSeq.
SOURCE      Halopseudomonas xiamenensis
  ORGANISM  Halopseudomonas xiamenensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Halopseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16105.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Halopseudomonas xiamenensis"
                     /db_xref="taxon:157792"
     Protein         1..203
                     /product="DUF4823 domain-containing protein"
                     /calculated_mol_wt=22763
     Region          52..199
                     /region_name="DUF4823"
                     /note="Domain of unknown function (DUF4823); pfam16105"
                     /db_xref="CDD:435138"
ORIGIN      
        1 mkltamipgl mtmlalllls actpsqmrde gryylsdagl ldnyrikrsg nwrlqadshl
       61 yiaqshfvpv ghtyarpnil aeeafaaavq vfpmvqraeq plgldqaltr treqgldyll
      121 ytrfasaqss agpqqgeqta qdghvgrdrv vlqlllmeaa tervidfvti esrtgflafy
      181 ksrpedllre pmqdytrqll grp
//
LOCUS       WP_235991275             292 aa            linear   BCT 02-MAR-2025
DEFINITION  cache domain-containing protein [Halopseudomonas xiamenensis].
ACCESSION   WP_235991275
VERSION     WP_235991275.1
KEYWORDS    RefSeq.
SOURCE      Halopseudomonas xiamenensis
  ORGANISM  Halopseudomonas xiamenensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Halopseudomonas.
REFERENCE   1  (residues 1 to 292)
  AUTHORS   Upadhyay,A.A., Fleetwood,A.D., Adebali,O., Finn,R.D. and
            Zhulin,I.B.
  TITLE     Cache Domains That are Homologous to, but Different from PAS
            Domains Comprise the Largest Superfamily of Extracellular Sensors
            in Prokaryotes
  JOURNAL   PLoS Comput Biol 12 (4), e1004862 (2016)
   PUBMED   27049771
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028509.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17200.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Halopseudomonas xiamenensis"
                     /db_xref="taxon:157792"
     Protein         1..292
                     /product="cache domain-containing protein"
                     /calculated_mol_wt=32684
     Region          <63..282
                     /region_name="dCache_2"
                     /note="Cache domain; pfam08269"
                     /db_xref="CDD:462414"
     Region          184..>282
                     /region_name="COG4564"
                     /note="Signal transduction histidine kinase [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:443621"
ORIGIN      
        1 mlrrkthriw aalaaclmfl qvqtataqeq esekarallt eavdyykang dkalavfsrq
       61 gpfvkddlyv fvintngiml asggpsvmli grdifntidd elrpkfqqal sqpetgeile
      121 adypwgnwst ggrkitkhvy fqrvgdtvla vgyyqprass eqalqlleta aeavnsnprd
      181 tfnainaldq rfykddlyvf vveldnnrfv ahgsnlrlig rdfsaladrl gkpfgqeald
      241 klatsemvef dyqwkhpisg etehkhayar kvgnylvavg yyqpnngngs dq
//
LOCUS       WP_235991280             154 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3304 domain-containing protein [Halopseudomonas xiamenensis].
ACCESSION   WP_235991280
VERSION     WP_235991280.1
KEYWORDS    RefSeq.
SOURCE      Halopseudomonas xiamenensis
  ORGANISM  Halopseudomonas xiamenensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Halopseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023173.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11745.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Halopseudomonas xiamenensis"
                     /db_xref="taxon:157792"
     Protein         1..154
                     /product="DUF3304 domain-containing protein"
                     /calculated_mol_wt=17908
     Region          48..129
                     /region_name="DUF3304"
                     /note="Protein of unknown function (DUF3304); pfam11745"
                     /db_xref="CDD:463339"
ORIGIN      
        1 mtslyqkwls tpkairwpii ilfylmlivg yllwqsqrpg gaflyghnht drpifsywvn
       61 dkwggnggvt ccwrirgdtl kvvwildvtq kqfdeglgee ryelevpnpp rqrpddtlhv
      121 hflpgnqvrl awnhsaaspl eeeladyyyq gdtr
//
LOCUS       WP_235991327             445 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Halopseudomonas
            xiamenensis].
ACCESSION   WP_235991327
VERSION     WP_235991327.1
KEYWORDS    RefSeq.
SOURCE      Halopseudomonas xiamenensis
  ORGANISM  Halopseudomonas xiamenensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Halopseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024257.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12849.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Halopseudomonas xiamenensis"
                     /db_xref="taxon:157792"
     Protein         1..445
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=48221
     Region          33..309
                     /region_name="PBP2_phosphate_like_1"
                     /note="Substrate binding domain of putative ABC-type
                     phosphate transporter, a member of the type 2 periplasmic
                     binding fold superfamily; cd13653"
                     /db_xref="CDD:270371"
     Site            order(39..41,94..95,113,193)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:270371"
     Region          341..444
                     /region_name="OmpA_C-like"
                     /note="Peptidoglycan binding domains similar to the
                     C-terminal domain of outer-membrane protein OmpA; cd07185"
                     /db_xref="CDD:143586"
     Site            order(348..349,384..385,390,394,434,438)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:143586"
ORIGIN      
        1 mskitsglqa rirmvllagl tclstqahta plqlqingsn tigaklapll vegmlreaga
       61 tdidvqlnss pqehritais aqaepieisl nahgsttgft glidqtgqia aasrpikdse
      121 vealknagdm rskqaeqiig ldglavivhp dnpistldve qiarifsgqa tdwsqlggqq
      181 gkirlhardg nsgtwetfrd lvltprkldl qadarryesn selsrsvsid rnaigfvgla
      241 svdqaralai ssgdsramlp skelvatedy plsrrlymyi speesnplaq aliaftqsqa
      301 gqdiveqvgf vgqnisamqv tpqpympddy rtlaeqaqrl svnfrftegs arldnkahqd
      361 idrlldylqa qgktqnkvvl vgfgdprnrg aellsrlram tvraalvghg ifvkdaigig
      421 ddlpvaantn ddgrfknrrv eiwvy
//
LOCUS       WP_235991441             239 aa            linear   BCT 02-MAR-2025
DEFINITION  TraX family protein [Facklamia lactis].
ACCESSION   WP_235991441
VERSION     WP_235991441.1
KEYWORDS    RefSeq.
SOURCE      Facklamia lactis
  ORGANISM  Facklamia lactis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Aerococcaceae; Facklamia.
REFERENCE   1  (residues 1 to 239)
  AUTHORS   Maneewannakul,K., Maneewannakul,S. and Ippen-Ihler,K.
  TITLE     Characterization of traX, the F plasmid locus required for
            acetylation of F-pilin subunits
  JOURNAL   J Bacteriol 177 (11), 2957-2964 (1995)
   PUBMED   7768788
REFERENCE   2  (residues 1 to 239)
  AUTHORS   Moore,D., Hamilton,C.M., Maneewannakul,K., Mintz,Y., Frost,L.S. and
            Ippen-Ihler,K.
  TITLE     The Escherichia coli K-12 F plasmid gene traX is required for
            acetylation of F pilin
  JOURNAL   J Bacteriol 175 (5), 1375-1383 (1993)
   PUBMED   8444800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017655.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05857.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Facklamia lactis"
                     /db_xref="taxon:2749967"
     Protein         1..239
                     /product="TraX family protein"
                     /calculated_mol_wt=28481
     Region          10..223
                     /region_name="TraX"
                     /note="TraX protein; cl05434"
                     /db_xref="CDD:414418"
ORIGIN      
        1 myqyiskimt gaslkriali tmiidhtava iiqntifmqs ykysenflli aeqwynwmrm
       61 igriafplyi ylmiegyfht snlkkyfqrl lilalvseip fdlllngeif nwshqniffe
      121 liailflfyf ldkcrgewik ilagtiviat isyffqfdys fygiiaafim fyaygnrtke
      181 alsiipaflf efysifvfls avfifyyngd rgkinsklyy wayplhllll ylihlwmiq
//
LOCUS       WP_235991543             159 aa            linear   BCT 02-MAR-2025
DEFINITION  PhnD/SsuA/transferrin family substrate-binding protein [Facklamia
            lactis].
ACCESSION   WP_235991543
VERSION     WP_235991543.1
KEYWORDS    RefSeq.
SOURCE      Facklamia lactis
  ORGANISM  Facklamia lactis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Aerococcaceae; Facklamia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12974.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Facklamia lactis"
                     /db_xref="taxon:2749967"
     Protein         1..159
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /calculated_mol_wt=17595
     Region          <2..144
                     /region_name="Phosphonate-bd"
                     /note="ABC transporter, phosphonate, periplasmic
                     substrate-binding protein; pfam12974"
                     /db_xref="CDD:432911"
ORIGIN      
        1 msptspagyi ypalklsdky dksiadlsna vqsdsyltaf srlasgqvdi lltyadghrd
       61 yaeqweselg aendiwtdtd tllitdaifn dtvsvsknsd tmtdelkeav aealinlted
      121 ektcevifni yshegyekas dsdydnerka qellleann
//
LOCUS       WP_235991613             610 aa            linear   BCT 02-MAR-2025
DEFINITION  LysM peptidoglycan-binding domain-containing protein [Facklamia
            lactis].
ACCESSION   WP_235991613
VERSION     WP_235991613.1
KEYWORDS    RefSeq.
SOURCE      Facklamia lactis
  ORGANISM  Facklamia lactis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Aerococcaceae; Facklamia.
REFERENCE   1  (residues 1 to 610)
  AUTHORS   Bateman,A. and Bycroft,M.
  TITLE     The structure of a LysM domain from E. coli membrane-bound lytic
            murein transglycosylase D (MltD)
  JOURNAL   J Mol Biol 299 (4), 1113-1119 (2000)
   PUBMED   10843862
REFERENCE   2  (residues 1 to 610)
  AUTHORS   Joris,B., Englebert,S., Chu,C.P., Kariyama,R., Daneo-Moore,L.,
            Shockman,G.D. and Ghuysen,J.M.
  TITLE     Modular design of the Enterococcus hirae muramidase-2 and
            Streptococcus faecalis autolysin
  JOURNAL   FEMS Microbiol Lett 70 (3), 257-264 (1992)
   PUBMED   1352512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01476.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Facklamia lactis"
                     /db_xref="taxon:2749967"
     Protein         1..610
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=66186
     Region          <35..267
                     /region_name="PRK06347"
                     /note="1,4-beta-N-acetylmuramoylhydrolase"
                     /db_xref="CDD:180536"
     Region          252..400
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
     Region          <466..514
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
     Region          <472..608
                     /region_name="PRK06347"
                     /note="1,4-beta-N-acetylmuramoylhydrolase"
                     /db_xref="CDD:180536"
ORIGIN      
        1 mkymsknill rsvialssms lltfsvqhvv naqttytvqk gdnlyriaqt yglteeelmt
       61 ingltstfid vgdqlivegt pnasapeagg dqtengsvyk vkpgdtlssi anthgitvse
      121 lkalnglssd yldvgdeliv agtgqapvvd ngnnsglpdg tyivnpgdsl ytiassygvt
      181 veqllawngl vtdliypgdk isvlgsgqgp vqqpsvpapg tgvtadgdhs hvvqpgenly
      241 dlgraygmte eqvmayngls snliypgdvi yfpssssevv tepsaqapss neetnnvspv
      301 tssegpgetp naagadkede seskvrrpqs skkekekltd petkavspdq ieiqthevqe
      361 gekladiakq ydisgtdirk wngllndeia agdvlyvsdp sqvvtkfnqe rplkdtypir
      421 ysftrtdkmk dleklfntse kqirewsdia edaeietgqe ltvshpdkkp gihevteeds
      481 iasiakkykv sveairkwng lldnllyige eiavanpwst yhqvepgetl evladkysvs
      541 ieelrqwnnl peesmivngv livsdpkafe denetaesee skenstsdet taedetnnee
      601 stveqsetse
//
LOCUS       WP_235991662              66 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3231 family protein [Metabacillus schmidteae].
ACCESSION   WP_235991662
VERSION     WP_235991662.1
KEYWORDS    RefSeq.
SOURCE      Metabacillus schmidteae
  ORGANISM  Metabacillus schmidteae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Metabacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022986.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11553.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Metabacillus schmidteae"
                     /db_xref="taxon:2730405"
     Protein         1..66
                     /product="DUF3231 family protein"
                     /calculated_mol_wt=7468
     Region          2..>52
                     /region_name="DUF3231"
                     /note="Protein of unknown function (DUF3231); pfam11553"
                     /db_xref="CDD:402931"
ORIGIN      
        1 mdtfnhnvem tsseianlwt qyindslsic slthsiekak dedvkgvfef alspcriayn
       61 htyrnv
//
LOCUS       WP_235991775             599 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Metabacillus schmidteae].
ACCESSION   WP_235991775
VERSION     WP_235991775.1
KEYWORDS    RefSeq.
SOURCE      Metabacillus schmidteae
  ORGANISM  Metabacillus schmidteae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Metabacillus.
REFERENCE   1  (residues 1 to 599)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 599)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 599)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 599)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Metabacillus schmidteae"
                     /db_xref="taxon:2730405"
     Protein         1..599
                     /product="ATP-binding protein"
                     /calculated_mol_wt=67496
     Region          38..167
                     /region_name="HisK_sensor"
                     /note="Histidine kinase sensor domain; pfam18698"
                     /db_xref="CDD:436672"
     Region          203..247
                     /region_name="HAMP"
                     /note="Histidine kinase, Adenylyl cyclase,
                     Methyl-accepting protein, and Phosphatase (HAMP) domain;
                     cd06225"
                     /db_xref="CDD:381743"
     Region          227..595
                     /region_name="WalK"
                     /note="Sensor histidine kinase WalK [Signal transduction
                     mechanisms]; COG5002"
                     /db_xref="CDD:444026"
ORIGIN      
        1 milwrsvvgk lwgtiillvs fvlfvltilm lefmenyhve kaekeltqla tkvsmilesh
       61 edqelaksis weladelthi iivendktfs nsplkneelp hltiediekd delslpltkq
      121 qriskrtnle qpnnvfange devlivgvpy nvsktntgav fisqslqavh ettkettsni
      181 ilaagiaiil ttvfafflst rityplrkmr evaqelargk fesrvpimsn deigelgiaf
      241 nqmgkqlkfh inalnqekeh ltnilssmad gvitlnidgm ilvtnppaer flkawyyeqn
      301 mnvetggelp sdmkalyqrv vntekeqmle imiqgrswvi lmtplynqln vrgavavlrd
      361 mteerrldkl rkdfianvsh elrtpismlq gyseaivddi astdeekkdi akvihdeslr
      421 mgrlvndlld larmeaghit lnleqiqlsd fvekvsrkfq glakdkdisl ltdvhitepa
      481 hiidpdrieq vltnlidnai rhtsengsvv iavkdqlngv iidvkdsgsg ipeedlpfvf
      541 erfykadkar trgragtglg laivknivea hkgkisvhsk vnegttfsff lprkklese
//
LOCUS       WP_235991820             218 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase domain-containing protein [Metabacillus
            schmidteae].
ACCESSION   WP_235991820
VERSION     WP_235991820.1
KEYWORDS    RefSeq.
SOURCE      Metabacillus schmidteae
  ORGANISM  Metabacillus schmidteae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Metabacillus.
REFERENCE   1  (residues 1 to 218)
  AUTHORS   Dang,G., Chen,L., Li,Z., Deng,X., Cui,Y., Cao,J., Yu,S., Pang,H.
            and Liu,S.
  TITLE     Expression, Purification and Characterisation of Secreted Esterase
            Rv2525c from Mycobacterium tuberculosis
  JOURNAL   Appl Biochem Biotechnol 176 (1), 1-12 (2015)
   PUBMED   25869294
REFERENCE   2  (residues 1 to 218)
  AUTHORS   Bellinzoni,M., Haouz,A., Miras,I., Magnet,S., Andre-Leroux,G.,
            Mukherjee,R., Shepard,W., Cole,S.T. and Alzari,P.M.
  TITLE     Structural studies suggest a peptidoglycan hydrolase function for
            the Mycobacterium tuberculosis Tat-secreted protein Rv2525c
  JOURNAL   J Struct Biol 188 (2), 156-164 (2014)
   PUBMED   25260828
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08924.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Metabacillus schmidteae"
                     /db_xref="taxon:2730405"
     Protein         1..218
                     /product="glycoside hydrolase domain-containing protein"
                     /calculated_mol_wt=24878
     Region          5..198
                     /region_name="GH25_muramidase"
                     /note="Endo-N-acetylmuramidases (muramidases) are
                     lysozymes (also referred to as peptidoglycan hydrolases)
                     that degrade bacterial cell walls by catalyzing the
                     hydrolysis of 1,4-beta-linkages between N-acetylmuramic
                     acid and N-acetyl-D-glucosamine residues; cl10448"
                     /db_xref="CDD:447900"
     Site            order(11,37,66,104,106,133,162,194)
                     /site_type="active"
                     /db_xref="CDD:119373"
ORIGIN      
        1 mslarkiwgv dsvgtvdqdf yntvrkqlgv pkywgrnlte ipnvtsgltk meinflrnkg
       61 ikilpiytii nkeigyeqaq iagrnavyha rrlgfpqetv ifanienldn vnalwirgwv
      121 etllttgyra gfhhlsqngd ftqafcqvvk enhdislqai lwsaetetgi sserkaprfn
      181 pvtpnckanv wlwkygrdfn ndlintnlad ervlkfly
//
LOCUS       WP_235991840             636 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF294 nucleotidyltransferase-like domain-containing protein
            [Metabacillus schmidteae].
ACCESSION   WP_235991840
VERSION     WP_235991840.1
KEYWORDS    RefSeq.
SOURCE      Metabacillus schmidteae
  ORGANISM  Metabacillus schmidteae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Metabacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015410.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03445.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Metabacillus schmidteae"
                     /db_xref="taxon:2730405"
     Protein         1..636
                     /product="DUF294 nucleotidyltransferase-like
                     domain-containing protein"
                     /GO_function="GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA]"
                     /calculated_mol_wt=73946
     Region          14..186
                     /region_name="Crp"
                     /note="cAMP-binding domain of CRP or a regulatory subunit
                     of cAMP-dependent protein kinases [Signal transduction
                     mechanisms]; COG0664"
                     /db_xref="CDD:440428"
     Region          165..281
                     /region_name="COG2905"
                     /note="Signal-transduction protein containing
                     cAMP-binding, CBS, and nucleotidyltransferase domains
                     [Signal transduction mechanisms]"
                     /db_xref="CDD:442149"
     Region          309..446
                     /region_name="DUF294"
                     /note="Putative nucleotidyltransferase DUF294; pfam03445"
                     /db_xref="CDD:460919"
     Region          495..630
                     /region_name="DUF294_C"
                     /note="Putative nucleotidyltransferase substrate binding
                     domain; pfam10335"
                     /db_xref="CDD:463050"
ORIGIN      
        1 mselkhllkd yypfslltey qlqeltekas qkhfsknefi fhedeaveei dlyflvsgla
       61 knilhqsngk qlslryyypg diiglmvmft sgelnfsvqa ledctvfkfn krhffeimtr
      121 nndfskviwg sigertksly nemknkasqa ddeenvhllk trvkilmepp lfiqphltmn
      181 qaakmlkern esglivskds akmlgiityd eilnytsttp tshfvsdwmn ttpvyvdada
      241 fafealsfik nkfshcipvl nnqhvigilt srsflnlens syldltynvq kttsldalvk
      301 qgplvnttlh afvenlveke syaynvsemi tnhndnlhrq likltenemk qqgygrppin
      361 ycfivmgsqa rneqgfrtdq dngmilanye hlsnrewiee yfitftkkln sslrelgfpe
      421 ctggimakee kwrksvsqwk idiqtwrnel daqeiqnftm fydfrpiygd fsladevraf
      481 lnekaqhskt lqqllmkdal rfkvsahpfg linlkqknkk invkktgltq iiystrinai
      541 kyginevsti krlnalknlq amhprdvena ktalhylhyf rlrqnlkele nnsyvsndip
      601 iheltkedrl klkealqvah rmqqvtkisf nrnrvv
//
LOCUS       WP_235991917             299 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: S1 RNA-binding domain-containing protein
            [Metabacillus].
ACCESSION   WP_235991917
VERSION     WP_235991917.1
KEYWORDS    RefSeq.
SOURCE      Metabacillus
  ORGANISM  Metabacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 299)
  AUTHORS   Bycroft,M., Hubbard,T.J., Proctor,M., Freund,S.M. and Murzin,A.G.
  TITLE     The solution structure of the S1 RNA binding domain: a member of an
            ancient nucleic acid-binding fold
  JOURNAL   Cell 88 (2), 235-242 (1997)
   PUBMED   9008164
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012784.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00575.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Metabacillus"
                     /db_xref="taxon:2675233"
     Protein         1..299
                     /product="S1 RNA-binding domain-containing protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /calculated_mol_wt=34261
     Region          <15..275
                     /region_name="RpsA"
                     /note="Ribosomal protein S1 [Translation, ribosomal
                     structure and biogenesis]; COG0539"
                     /db_xref="CDD:440305"
ORIGIN      
        1 metitnqaws heeletlari srnqevvqgm vqsvgfitmp vpqengrmvs qetevaifrl
       61 eggvkafcps sefsehsfkt lngfvgtyqn ivitrldleh qlaivsvkka dkisrenfwn
      121 tikyldkkge lknevfdgvv wginekneri hvrvngtdcf mlkydwdwnn nidissvver
      181 gtkipvkvlr ydeevniiqv srkdtmedpf kkleqmkeme vvvgrvhnvh pihgifvnle
      241 egvrlkaikp rhlpeplvge ivscrireid aknrkgkvvi vdypqgkkkr ndigsflfg
//
LOCUS       WP_235991922             170 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: tyrosine-type recombinase/integrase [Metabacillus].
ACCESSION   WP_235991922
VERSION     WP_235991922.1
KEYWORDS    RefSeq.
SOURCE      Metabacillus
  ORGANISM  Metabacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 170)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 170)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Metabacillus"
                     /db_xref="taxon:2675233"
     Protein         1..170
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=19274
     Region          <25..143
                     /region_name="XerD"
                     /note="Site-specific recombinase XerD [Replication,
                     recombination and repair]; COG4974"
                     /db_xref="CDD:443999"
ORIGIN      
        1 mlsenvqhqi yeyarrtwkk rsisivlltl etgikiselt alnksnleti ngntyiyvss
       61 gfgvkrklpi sdelyqmnra sikqnpehpd alfvsnhgvr igiravhssl rnfgissqvl
      121 rdtyifnlie edvdtyeiaq laglhitdgl ikkfysesli lqdefieian
//
LOCUS       WP_235991969             200 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Pseudomonas
            paracarnis].
ACCESSION   WP_235991969
VERSION     WP_235991969.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas paracarnis
  ORGANISM  Pseudomonas paracarnis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Pseudomonas paracarnis"
                     /db_xref="taxon:2750625"
     Protein         <1..>200
                     /product="DUF6531 domain-containing protein"
     Region          70..143
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
ORIGIN      
        1 lssaatpikt vpavplkagd tlvsnpvpmv rgkaqrttlv rqepvddvpa masnpkgdaa
       61 apadktithg cpvsmvtgee lltltdgald gilpfewtrl yrtsavevdc elglgwshal
      121 ahrlvvsgds vvwtdhenrs ttlplptdsr paitnslaea aiylgsapde lvlaqasrfy
      181 hfrdgvlvsi sdaydnrlrl
//
LOCUS       WP_235991982             327 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Flavobacterium panici].
ACCESSION   WP_235991982
VERSION     WP_235991982.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium panici
  ORGANISM  Flavobacterium panici
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 327)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Flavobacterium panici"
                     /db_xref="taxon:2654843"
     Protein         1..327
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=36896
     Region          41..322
                     /region_name="MET2"
                     /note="Homoserine O-acetyltransferase [Amino acid
                     transport and metabolism]; COG2021"
                     /db_xref="CDD:441624"
ORIGIN      
        1 menipspiii qdfitesgal ypslplsftl sgkplytapi vlvnhaltgn aqvtgengww
       61 ndligeakti dtnqytvlaf nvpgngndsf iienyqdftt rdiarifikg lkalnieqvf
      121 aiiggsvggg iaweilalep nitehlipia tdwkstdwmi ancflqeqil nnsskpieda
      181 rihamlcyrs pesfkekfqr tinqdllifn ieswlahhgk klqqryqlas yklmnqllkt
      241 iditrnsedf etlisksnaa ihivainsdl fftpkenlet ynelkkfknn vfyseidsah
      301 ghdaflieyk qldhlladif kaetiak
//
LOCUS       WP_235991986             953 aa            linear   BCT 02-MAR-2025
DEFINITION  RICIN domain-containing protein [Flavobacterium panici].
ACCESSION   WP_235991986
VERSION     WP_235991986.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium panici
  ORGANISM  Flavobacterium panici
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025563.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14200.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..953
                     /organism="Flavobacterium panici"
                     /db_xref="taxon:2654843"
     Protein         1..953
                     /product="RICIN domain-containing protein"
                     /calculated_mol_wt=101865
     Region          <229..298
                     /region_name="Reprolysin_3"
                     /note="Metallo-peptidase family M12B Reprolysin-like;
                     pfam13582"
                     /db_xref="CDD:463926"
     Region          502..584
                     /region_name="Crystall"
                     /note="Beta/Gamma crystallin; cl02528"
                     /db_xref="CDD:470604"
     Region          594..727
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cd00161"
                     /db_xref="CDD:467293"
     Site            order(608..610,621,623,630..631)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(655..656,668,670,677..678)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(702..704,715,717,724..725)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Region          741..861
                     /region_name="CBM6_cellulase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); appended to
                     glycoside hydrolase (GH) domains, including GH5
                     (cellulase); cd04080"
                     /db_xref="CDD:271146"
     Site            order(748,772,774,776,806..807,847)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:271146"
     Site            order(755,763..769,823..830,854)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:271146"
     Region          885..953
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mknnyrfrls llliisfgyf ataqtslgss ktflnkiksg lvssttakgp ektillqaad
       61 sksfngkiny kesdqssefl igeiknvaes sfyikvkdqs leghiilkkt reaykyysda
      121 qgnafvskvd intlvcidyk nlpskaankt saaaeiapal lnlqslpgaa gcvlldfdgy
      181 ympagnlwnn gnainaaasg msdaavqqhw evvsedyrpf nlnvttseav fnsyprnrrm
      241 rvvvtptnta apgaggvayi gsfnwdndvp cwvfitsgks ggdassheig htfdlghdgr
      301 tnpaedyfvg ldgtswapim gagyyrpvvq wskgeynfan nlqddvatia gskfgvgyrg
      361 ddygdntasa atldynasga inqkngiiss aadydfftft tgggnvsina ntvsrdgnlh
      421 lllrlynsag temgtywnsd pfalnasmnv nlpagkyfvg vdgngagnag sggysaygsi
      481 gsysvtgtip pggninpttg vitaykdcny tgfsggltig dynlarlnsl gilnddissl
      541 ritqgfqail yqddnftgas tvinsdnscl natwndkvss irilangvtt lgnqtfflqn
      601 rnsnlnmdvw nasltngasi kqgtantgnn qkftfthlgd glykiianhs gqsldvngfn
      661 tangvsveqy pyngttnqqf vlvstgdgfy kivarhsgri vevagastan ganvqqwdnn
      721 nqtcgqwkli attasqtssl iqaedysams giqveattdt gggsnvgyte tgdwlaynni
      781 nfpttgsyli eyrvasavtg gklssdlngg tiilgnvdip ntggwqnwqt vtqtvnvnag
      841 tynfgiyiqn tgmninwiri tkvgagapaa skdidekvee vvfnvypnpv setlfftkdv
      901 sggnvkvids qgsvvssqks nddslnvshl rqgiyfvvfe kdgqktikrf ikk
//
LOCUS       WP_235992011             997 aa            linear   BCT 02-MAR-2025
DEFINITION  discoidin domain-containing protein [Flavobacterium panici].
ACCESSION   WP_235992011
VERSION     WP_235992011.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium panici
  ORGANISM  Flavobacterium panici
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 997)
  AUTHORS   Baumgartner,S., Hofmann,K., Chiquet-Ehrismann,R. and Bucher,P.
  TITLE     The discoidin domain family revisited: new members from prokaryotes
            and a homology-based fold prediction
  JOURNAL   Protein Sci 7 (7), 1626-1631 (1998)
   PUBMED   9684896
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012956.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00754.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..997
                     /organism="Flavobacterium panici"
                     /db_xref="taxon:2654843"
     Protein         1..997
                     /product="discoidin domain-containing protein"
                     /calculated_mol_wt=113274
     Region          53..>481
                     /region_name="LacZ"
                     /note="Beta-galactosidase/beta-glucuronidase [Carbohydrate
                     transport and metabolism]; COG3250"
                     /db_xref="CDD:442481"
     Region          741..852
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
     Region          889..983
                     /region_name="Ig_GlcNase"
                     /note="Exo-beta-D-glucosaminidase Ig-fold domain;
                     pfam18368"
                     /db_xref="CDD:465727"
ORIGIN      
        1 maflflvtif hhsnnnmkfn tiqvyitlfv lnalsfhfya qnkvslnssd ivwklkpqae
       61 lgkdslkiaa adysdkdwvk avvpgtvfns yvvsglekdp nfgdniyqvd kskydrsfcy
      121 rsefsvpenf tkeiiwlnfe ginregdiyl ngkklatlsg mmqrgkfdvt klvhrkaknv
      181 ltilvsipkq plnnygspty issagwdwmp yvpglnsgit ddvflsntdk vtiadpwvht
      241 nlstnaradl dvkvdlknss tqnqegvltg vimpgnitfs kkisldanav tsvklskeqf
      301 pelsiqnpkl wwpngygdpn lytcqftfki gdvvsdsqki tfgikkytyd teggvlhisi
      361 nrkrvflkgg nwgmseymlr crgeeydlkv klhkemnyni irnwlgsttd vefyqacdky
      421 gimvwddfwl nanpnlpldi hvfnsnviek ikrvrnhasi aiwcgnnegl pqpplngwia
      481 eniktfdnnd ryyqpcsntg nlsgsglwgn kdprfyftky pepyvgtgdg pswglrseig
      541 tavfpnmesf kkiipekdww prndmwdkhf fgqkafnasp dnydksiter ygkpnnleey
      601 tkkaqllnie tnkamyegwl dhmwedasgi miwmsqssyp smvwqtydyy ydltgaywgv
      661 ksacepmhiq wspvnnsvkv inttgtdfkn ltaeatvynl dgksvakfsq navvdsysnt
      721 atesfvipfy snqkdlafqk nviasstegg ntkditdgds ntrwaskstd dewiyvdlen
      781 eyiinrvvln wenaygkeyk iqistdaknw tdvstikdgk qglqnisfde tkgryvrmlg
      841 ikrgsgwgys lydfkvfgae tntdtsslsp vhfirlklkd aqnkilsenf ywrgsnmkdf
      901 tdlnklpkan vnvsskvvkq ngkyiikski ssplgiafgi qiqavneksg tqilpaivsd
      961 syftllkges kevtiefees alkngekpvi kaipynk
//
LOCUS       WP_235992001            1123 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Flavobacterium panici].
ACCESSION   WP_235992001
VERSION     WP_235992001.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium panici
  ORGANISM  Flavobacterium panici
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 1123)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Flavobacterium panici"
                     /db_xref="taxon:2654843"
     Protein         1..1123
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=119647
     Region          44..383
                     /region_name="AmyAc_arch_bac_AmyA"
                     /note="Alpha amylase catalytic domain found in archaeal
                     and bacterial Alpha-amylases (also called
                     1,4-alpha-D-glucan-4-glucanohydrolase); cd11313"
                     /db_xref="CDD:200452"
     Site            order(203,205,235,296..297)
                     /site_type="active"
                     /db_xref="CDD:200452"
     Site            order(205,235,297)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:200452"
     Region          383..971
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          900..1025
                     /region_name="beta-trefoil_Ricin_EndoBetaGal-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold,
                     found in Clostridium perfringens
                     GlcNac-alpha-1,4-Gal-releasing endo-beta-galactosidase
                     (Endo-beta-Gal(GnGa)) and similar proteins; cd23432"
                     /db_xref="CDD:467310"
     Site            order(914..917,921,923,930..931)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467310"
     Site            order(955..958,964,966,974..975)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467310"
     Site            order(1000..1002,1009,1011,1014,1019..1020)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467310"
     Region          1050..1123
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mkikittrlf hitktlvcfl llfassvyaq dppqygtpfa gvpdtrdvnm yqvhirpfsa
       61 ngnlagvtar ldnikalgtn viylmpiyph gtdsrssasp ycikdfkavg seygsladlr
      121 tlvdgahsrg mavildiain gtswdnvwtv shpeyykrtg ttiqqlgnfs diaaldlnns
      181 atraaikdam rywifaanvd gyrcdyannp pldfwsevns nlrgisshnl lmlaegdrqe
      241 nfqvgfdmny gdrwfhsgly dianggpvsq rlqdqstyey akatgnqqiv rytgnhdtyt
      301 nddgvrrpii vfkshngvva nflvsaymkg vpflmsgqei dyepktdwpw tnfkfnwsqn
      361 ptaaadfaki lnfrttsaai rrgdlttyan ddisiftktl gtekvivmsn lrnasksyvi
      421 paalagtyvn pynnnasvtl ttgatrtfaa yeylvltntn tpvvavtgvs vspttvtvgl
      481 gstqqlnaai apanatnqnv twtssntava tvnasglvta vaagittitv ktvdgnktat
      541 savtvaaipv ssvavsptts slyagntqql satispanat nknvtwsssn tgiatvnssg
      601 lvtavsagta titattqden ktasatitvn pntnftvyfy kpsnwgtgik iyywnalptg
      661 vlaavnwpgv nmtdagngwy sytftnvtst nlifndgtnq tadlsrnktg wymnttwyds
      721 npgtvvavts vtlspttstl lvgatqqltp tvnpsnatnk avtysssnta vatvnssgli
      781 tavaagsati tvttqdgakt atcavtvnas nvavtsvsls psstslsvgg tqqltptvlp
      841 anatnksvny sssntavatv ngsglitava ngtatitvtt vdgsktstca vtvststggn
      901 yytiknrwtg aylsdsganv gygttvsgns ykwqkiaida tyfvlknvat geliniesqt
      961 gtvqsnitdt tfwsaqwssd yidgtwvrlr nrwqtgniih venqtgsaqy gnsqdgwysa
     1021 qwqlepttvg tgksavtine vsetekvigi ypnpatnnef hvllpelesg dsaaisvsdm
     1081 ngrtvlterl stsgkidhrl asgiyivniv skdfkvtkkl ivk
//
LOCUS       WP_235991727             343 aa            linear   BCT 02-MAR-2025
DEFINITION  SMODS domain-containing nucleotidyltransferase [Metabacillus
            schmidteae].
ACCESSION   WP_235991727
VERSION     WP_235991727.1
KEYWORDS    RefSeq.
SOURCE      Metabacillus schmidteae
  ORGANISM  Metabacillus schmidteae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Metabacillus.
REFERENCE   1  (residues 1 to 343)
  AUTHORS   Burroughs,A.M., Zhang,D., Schaffer,D.E., Iyer,L.M. and Aravind,L.
  TITLE     Comparative genomic analyses reveal a vast, novel network of
            nucleotide-centric systems in biological conflicts, immunity and
            signaling
  JOURNAL   Nucleic Acids Res 43 (22), 10633-10654 (2015)
   PUBMED   26590262
REFERENCE   2  (residues 1 to 343)
  AUTHORS   Davies,B.W., Bogard,R.W., Young,T.S. and Mekalanos,J.J.
  TITLE     Coordinated regulation of accessory genetic elements produces
            cyclic di-nucleotides for V. cholerae virulence
  JOURNAL   Cell 149 (2), 358-370 (2012)
   PUBMED   22500802
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037736.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18144.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Metabacillus schmidteae"
                     /db_xref="taxon:2730405"
     Protein         1..343
                     /product="SMODS domain-containing nucleotidyltransferase"
                     /calculated_mol_wt=39173
     Region          1..160
                     /region_name="SMODS"
                     /note="Second Messenger Oligonucleotide or Dinucleotide
                     Synthetase domain; cl39525"
                     /db_xref="CDD:477034"
ORIGIN      
        1 mklndyfkkf vanislnptr iariesaitn wetkfkedee lkdkfidyyt qgsystdtgv
       61 rpkgeeefdv dvvlvldise adepketlnw ikdrikshkg fenrvkakdr cvridyakdf
      121 hvdvvpafvy gdyikipskk esewtktnpt gfkdwcdgin ndsddyfskt vkvikhwrde
      181 kvgkdtapks illttlvgna hikktsiaet lvetldnmkd hlrdlvngle enddvpfven
      241 psladenlar nwtklkaqrf lnklttlked cqaaldeknk eesiklwqdi fgssyfpsel
      301 geasnmarsi qsgsvlvsst gelnsfqgtp ikehrfygeg kne
//
LOCUS       WP_235992044             125 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: lipocalin family protein [Flavobacterium].
ACCESSION   WP_235992044
VERSION     WP_235992044.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium
  ORGANISM  Flavobacterium
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025032.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13648.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Flavobacterium"
                     /db_xref="taxon:237"
     Protein         1..125
                     /product="lipocalin family protein"
                     /calculated_mol_wt=13285
ORIGIN      
        1 mfatscsndd negetivpla gkynlsktgt ivngnevlvd aaenqegcta nrdyldlrvs
       61 naavigdysg encalvettg tyvrshndlt itvgnvssts dimnltnkel kikdkttgii
      121 tvytr
//
LOCUS       WP_235992230             477 aa            linear   BCT 02-MAR-2025
DEFINITION  oligosaccharide flippase family protein [Taishania pollutisoli].
ACCESSION   WP_235992230
VERSION     WP_235992230.1
KEYWORDS    RefSeq.
SOURCE      Taishania pollutisoli
  ORGANISM  Taishania pollutisoli
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Crocinitomicaceae; Taishania.
REFERENCE   1  (residues 1 to 477)
  AUTHORS   Yao,Z. and Valvano,M.A.
  TITLE     Genetic analysis of the O-specific lipopolysaccharide biosynthesis
            region (rfb) of Escherichia coli K-12 W3110: identification of
            genes that confer group 6 specificity to Shigella flexneri
            serotypes Y and 4a
  JOURNAL   J Bacteriol 176 (13), 4133-4143 (1994)
   PUBMED   7517390
REFERENCE   2  (residues 1 to 477)
  AUTHORS   Becker,A., Kleickmann,A., Kuster,H., Keller,M., Arnold,W. and
            Puhler,A.
  TITLE     Analysis of the Rhizobium meliloti genes exoU, exoV, exoW, exoT,
            and exoI involved in exopolysaccharide biosynthesis and nodule
            invasion: exoU and exoW probably encode glucosyltransferases
  JOURNAL   Mol Plant Microbe Interact 6 (6), 735-744 (1993)
   PUBMED   8118055
REFERENCE   3  (residues 1 to 477)
  AUTHORS   Popham,D.L. and Stragier,P.
  TITLE     Cloning, characterization, and expression of the spoVB gene of
            Bacillus subtilis
  JOURNAL   J Bacteriol 173 (24), 7942-7949 (1991)
   PUBMED   1744050
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014051.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01943.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Taishania pollutisoli"
                     /db_xref="taxon:2766479"
     Protein         1..477
                     /product="oligosaccharide flippase family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=53779
     Region          36..409
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 mqqkflsnlv lllllnlvik pvaifgidat vqnqvgseay glyfsllnft flfnilldlg
       61 innfttknva qypglmtkym griaglrlvl fvlyavftli lasvlgyppe vypvlsilit
      121 qqfliamiay frsylsgmll frldallsvl drfllillcg avffftlpgn afkleyfiwi
      181 qfisyilsfl vglmlvvrhi gtskirfhrp isfliirqsi pyallivlmm lytrvdsvml
      241 ermlddgavq sgiyaqgfrl idaffmfaml fsnlllpifs rmiglkenvk elfslsskll
      301 iwgsialasf cfwnahevld liytndieks vppfqllmlt fvamciilif gtyltalgem
      361 ktlntiafig livnvgvnly liprwgvwga avstlmaqsv vavsqlyiva krlklnwqfa
      421 dagvfmlfva vcfsigwlgi lynihillqm galiaclllf kvinirlfss ilfaskk
//
LOCUS       WP_235992296             882 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase 115 family protein [Cellvibrio
            polysaccharolyticus].
ACCESSION   WP_235992296
VERSION     WP_235992296.1
KEYWORDS    RefSeq.
SOURCE      Cellvibrio polysaccharolyticus
  ORGANISM  Cellvibrio polysaccharolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cellvibrionales; Cellvibrionaceae; Cellvibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027309.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15979.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Cellvibrio polysaccharolyticus"
                     /db_xref="taxon:2082724"
     Protein         1..882
                     /product="glycosyl hydrolase 115 family protein"
                     /calculated_mol_wt=98534
     Region          71..185
                     /region_name="Glyco_hydro_20b"
                     /note="Glycosyl hydrolase family 20, domain 2; cl03741"
                     /db_xref="CDD:446174"
     Region          218..558
                     /region_name="Glyco_hydro_115"
                     /note="Glycosyl hydrolase family 115; pfam15979"
                     /db_xref="CDD:435050"
     Region          706..865
                     /region_name="GH115_C"
                     /note="Gylcosyl hydrolase family 115 C-terminal domain;
                     pfam17829"
                     /db_xref="CDD:436074"
ORIGIN      
        1 msptslpgai rnsitsqrnt rvasapnryw hrvfaimvfl slfmlphlqa raadswvash
       61 eragdfplvs kkvaapivfs gddftvvnla akdlvadver vtgkkpalkn slkdlqapav
      121 vvgtlgksal idqlvaagkl dvsnlrgawe sflittvdnp qpglakilvi agsdrrgtaf
      181 giyelsqaig vspwywwadv apekrtalfv kagthrfgpp svkyrgifin degwgihrwa
      241 antfeaengg igpktyrkvf elmlrlkant lwpamhpvtk pfnffpenaq laddyaivmg
      301 sshaepmlrn nvgewslphd qynyvdhrek vsgyweermk sngryeniyt igmrgihdsl
      361 mqgpendaer idllhtifnd qralinkyse apaeqvpqmf caykevlgly rqglqvpddv
      421 tivwpddnfg ymrnfanaee rnrsggfgvy yhisylgapm aylwlntvpp aliwqemsks
      481 yemgadrmwi vnvgdikpge vgielflqma wdinrwqgdn idtfltdwaq refgaanaqe
      541 iahimksyyq lnyqrkpehl qwwlprtepr lsllsdtesa eriqafsrlr lqaehlyqki
      601 patqrdaffq lvgypvigsa wanlrflege rgnseaahaa darlqqetar wntslakgkw
      661 kdfmatepad alwdkyrltg wtmpsdalla akkqakpata gkhsfaieae dfnrktdrsg
      721 vawqiipdlg ktgsgsvalf pvarhdfaen qlaekspyle yevsfaktgq ftlhvhlipt
      781 hplsgtllrf avglnndape gvaldvqdgs pawaqgvlna triatstlnv trtgkqtlki
      841 ygvdagvvld kivvdidgip dnylglsvre kpeadsstlk al
//
LOCUS       WP_235992300             149 aa            linear   BCT 02-MAR-2025
DEFINITION  flavodoxin domain-containing protein [Cellvibrio
            polysaccharolyticus].
ACCESSION   WP_235992300
VERSION     WP_235992300.1
KEYWORDS    RefSeq.
SOURCE      Cellvibrio polysaccharolyticus
  ORGANISM  Cellvibrio polysaccharolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cellvibrionales; Cellvibrionaceae; Cellvibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012481.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00258.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Cellvibrio polysaccharolyticus"
                     /db_xref="taxon:2082724"
     Protein         1..149
                     /product="flavodoxin domain-containing protein"
                     /GO_function="GO:0010181 - FMN binding [Evidence IEA]"
                     /calculated_mol_wt=15693
     Region          2..149
                     /region_name="FMN_red"
                     /note="NADPH-dependent FMN reductase; cl00438"
                     /db_xref="CDD:469770"
ORIGIN      
        1 mmtsiqiftg tmsgtaegva evvaqrlqal gytaevnlrp daaallrnpn eiilictsnt
       61 gsgdlpddiq plyleltrsy paiagrrygc inlgdscytt fneggaalda afadlgavri
      121 geplvidase gedpealala wleewvtll
//
LOCUS       WP_235992316             385 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4194 domain-containing protein [Cellvibrio polysaccharolyticus].
ACCESSION   WP_235992316
VERSION     WP_235992316.1
KEYWORDS    RefSeq.
SOURCE      Cellvibrio polysaccharolyticus
  ORGANISM  Cellvibrio polysaccharolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cellvibrionales; Cellvibrionaceae; Cellvibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025205.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13835.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Cellvibrio polysaccharolyticus"
                     /db_xref="taxon:2082724"
     Protein         1..385
                     /product="DUF4194 domain-containing protein"
                     /calculated_mol_wt=42245
     Region          27..204
                     /region_name="DUF4194"
                     /note="Domain of unknown function (DUF4194); pfam13835"
                     /db_xref="CDD:463992"
     Region          <204..347
                     /region_name="valS"
                     /note="valyl-tRNA synthetase; Provisional; PRK14900"
                     /db_xref="CDD:237855"
     Region          321..>377
                     /region_name="DUF6465"
                     /note="Family of unknown function (DUF6465); pfam20069"
                     /db_xref="CDD:466279"
ORIGIN      
        1 msslsdtlsq qlasrdlslq dwkllvqrll dygvlcrdds qveaefydqf vrieplvddy
       61 lsligvrfqh dkhfhyvrli ppgarlagvd dendepyngg frqrlsqhev amvlvlraey
      121 dkalregaid eqgctaisle aitlsmknll kralpeqmve rrqvfkklrq lrlihfvnea
      181 dldqgeswik irplivnlvs newleairqd aklgnhlltq sqadgeptdt pvnvedalqt
      241 gqqafeetda pvpaqaetpv epeivarvev ekkvatkkta tkkapviepl ptqspvklap
      301 akttskkpva akavasvspa vkkatakkva ppvvtknvse kpakttakag kpvatkqtav
      361 sskpttkkav gkkstaksis idaes
//
LOCUS       WP_235992331             140 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4845 domain-containing protein [Cellvibrio polysaccharolyticus].
ACCESSION   WP_235992331
VERSION     WP_235992331.1
KEYWORDS    RefSeq.
SOURCE      Cellvibrio polysaccharolyticus
  ORGANISM  Cellvibrio polysaccharolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cellvibrionales; Cellvibrionaceae; Cellvibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027463.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16137.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Cellvibrio polysaccharolyticus"
                     /db_xref="taxon:2082724"
     Protein         1..140
                     /product="DUF4845 domain-containing protein"
                     /calculated_mol_wt=15796
     Region          31..122
                     /region_name="DUF4845"
                     /note="Domain of unknown function (DUF4845); pfam16137"
                     /db_xref="CDD:435163"
ORIGIN      
        1 mrtlkkqqgl gllswilvli iagffllcaf kivplyaenr yvvsglqsla dagspleems
       61 dmeikrkman fyminnvrse gpknieiqrd akklivkidy esrvtlfdna pfirtldvvv
      121 vfknhldssr pnqcctpvse
//
LOCUS       WP_235992349             437 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidylprolyl isomerase [Cellvibrio polysaccharolyticus].
ACCESSION   WP_235992349
VERSION     WP_235992349.1
KEYWORDS    RefSeq.
SOURCE      Cellvibrio polysaccharolyticus
  ORGANISM  Cellvibrio polysaccharolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cellvibrionales; Cellvibrionaceae; Cellvibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025002.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13616.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Cellvibrio polysaccharolyticus"
                     /db_xref="taxon:2082724"
     Protein         1..437
                     /product="peptidylprolyl isomerase"
                     /EC_number="5.2.1.8"
                     /calculated_mol_wt=48832
     Region          37..435
                     /region_name="PRK10770"
                     /note="peptidyl-prolyl cis-trans isomerase SurA;
                     Provisional"
                     /db_xref="CDD:236758"
ORIGIN      
        1 mmiknplksr ahllasallg slllmgmqaa qaqtvmldrv vaivdddlvl eselnnrtlt
       61 vverlqaqyg qlppqevlqr qileqlvver vqlqlakryd idpgeaevdq aiqrimqsng
      121 itlaeleadl rregmsldal rkqiktdlti nqlqqgvvns rirvtdqeid nflastdgkf
      181 atspdyrlgh iliavsggad pdmvsaseke aqdiyqqlqs gadfsqmais hsndqsalqg
      241 gdigwrklaq lpelfsrqlv dlpvggvskp frsgagfhii knmeqrggge qlveqtkarh
      301 ilvktseimd dqqarnklla lrtrienged fatlarense dtgsmlsggd lgwampgmfv
      361 pifeetmans sigqisepfk sqfgwhilqv qerrsedmsn qmkrnqaanl irsrrfdeef
      421 qmwltqiree ayvevki
//
LOCUS       WP_235992469             154 aa            linear   BCT 02-MAR-2025
DEFINITION  SoxR reducing system RseC family protein [Cellvibrio
            polysaccharolyticus].
ACCESSION   WP_235992469
VERSION     WP_235992469.1
KEYWORDS    RefSeq.
SOURCE      Cellvibrio polysaccharolyticus
  ORGANISM  Cellvibrio polysaccharolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cellvibrionales; Cellvibrionaceae; Cellvibrio.
REFERENCE   1  (residues 1 to 154)
  AUTHORS   Beck,B.J., Connolly,L.E., De Las Penas,A. and Downs,D.M.
  TITLE     Evidence that rseC, a gene in the rpoE cluster, has a role in
            thiamine synthesis in Salmonella typhimurium
  JOURNAL   J Bacteriol 179 (20), 6504-6508 (1997)
   PUBMED   9335303
REFERENCE   2  (residues 1 to 154)
  AUTHORS   Missiakas,D., Mayer,M.P., Lemaire,M., Georgopoulos,C. and Raina,S.
  TITLE     Modulation of the Escherichia coli sigmaE (RpoE) heat-shock
            transcription-factor activity by the RseA, RseB and RseC proteins
  JOURNAL   Mol Microbiol 24 (2), 355-371 (1997)
   PUBMED   9159522
REFERENCE   3  (residues 1 to 154)
  AUTHORS   Schmehl,M., Jahn,A., Meyer zu Vilsendorf,A., Hennecke,S.,
            Masepohl,B., Schuppler,M., Marxer,M., Oelze,J. and Klipp,W.
  TITLE     Identification of a new class of nitrogen fixation genes in
            Rhodobacter capsulatus: a putative membrane complex involved in
            electron transport to nitrogenase
  JOURNAL   Mol Gen Genet 241 (5-6), 602-615 (1993)
   PUBMED   8264535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016160.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04246.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Cellvibrio polysaccharolyticus"
                     /db_xref="taxon:2082724"
     Protein         1..154
                     /product="SoxR reducing system RseC family protein"
                     /calculated_mol_wt=16256
     Region          1..141
                     /region_name="RseC"
                     /note="positive regulator of sigma E activity [Signal
                     transduction mechanisms]; COG3086"
                     /db_xref="CDD:442320"
ORIGIN      
        1 mieqgtvaai eqdclwvatv rrstcsgcrs eagcgqsmla rvsghnpllr vllnghttdq
       61 ftvgdqvdig vpeslvatgs lvsyllplvf llvfagiahh lfasdgital maltglvagg
      121 illrrfawls rdnprlqpvl itahsalplr npvc
//
LOCUS       WP_235992567             309 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Brucella daejeonensis].
ACCESSION   WP_235992567
VERSION     WP_235992567.1
KEYWORDS    RefSeq.
SOURCE      Brucella daejeonensis (Ochrobactrum daejeonense)
  ORGANISM  Brucella daejeonensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 309)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 309)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Brucella daejeonensis"
                     /db_xref="taxon:659015"
     Protein         1..309
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=34126
     Region          108..298
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(133,147..148,221,223,242,285)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:271175"
     Site            order(147,242,245,276,285)
                     /site_type="active"
                     /db_xref="CDD:271175"
ORIGIN      
        1 magmrvmmhh hvdrfvqlnr algmkfaaqe tslrafadfa aarsithvtt alilewaggs
       61 atpyaaqarf draraltvfl haedarhaip amgllgrsrr rrpaphiltr dqinrimqea
      121 llvpgltpis pltyhnlfgl lastglrise alslqrddlt edglmirkgk fgksrlvpih
      181 pstraalery learsavrhp gddlfvlghg raptatrvyv vfvrivrklg yrnptgpgpr
      241 vhdlrhtfav rsleacgndp qavlrhmkal stylghvdia ntywyleatp vllkmiasta
      301 ediwiggaa
//
LOCUS       WP_235992569             104 aa            linear   BCT 02-MAR-2025
DEFINITION  transcriptional regulator domain-containing protein [Brucella
            daejeonensis].
ACCESSION   WP_235992569
VERSION     WP_235992569.1
KEYWORDS    RefSeq.
SOURCE      Brucella daejeonensis (Ochrobactrum daejeonense)
  ORGANISM  Brucella daejeonensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 104)
  AUTHORS   Jowsey,W.J., Morris,C.R.P., Hall,D.A., Sullivan,J.T.,
            Fagerlund,R.D., Eto,K.Y., Solomon,P.D., Mackay,J.P., Bond,C.S.,
            Ramsay,J.P. and Ronson,C.W.
  TITLE     DUF2285 is a novel helix-turn-helix domain variant that
            orchestrates both activation and antiactivation of conjugative
            element transfer in proteobacteria
  JOURNAL   Nucleic Acids Res 51 (13), 6841-6856 (2023)
   PUBMED   37246713
REFERENCE   2  (residues 1 to 104)
  AUTHORS   Knittel,V., Sadana,P., Seekircher,S., Stolle,A.S., Korner,B.,
            Volk,M., Jeffries,C.M., Svergun,D.I., Heroven,A.K., Scrima,A. and
            Dersch,P.
  TITLE     RovC - a novel type of hexameric transcriptional activator
            promoting type VI secretion gene expression
  JOURNAL   PLoS Pathog 16 (9), e1008552 (2020)
   PUBMED   32966346
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040446.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20109.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Brucella daejeonensis"
                     /db_xref="taxon:659015"
     Protein         1..104
                     /product="transcriptional regulator domain-containing
                     protein"
                     /calculated_mol_wt=11843
     Region          1..68
                     /region_name="DUF6499"
                     /note="Family of unknown function (DUF6499); pfam20109"
                     /db_xref="CDD:437941"
ORIGIN      
        1 msedeswrse aaydyidklt pgdlaweflr rnpeyrksyq elvavgrlte dvagefaeqw
       61 glrfrrrplq lrahpanlld panrsgdtav drrtepggts pppr
//
LOCUS       WP_235992671             131 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Pseudomonas sp. p50(2008)].
ACCESSION   WP_235992671
VERSION     WP_235992671.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas sp. p50(2008)
  ORGANISM  Pseudomonas sp. p50(2008)
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 131)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 131)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Pseudomonas sp. p50(2008)"
                     /db_xref="taxon:2816832"
     Protein         1..131
                     /product="VOC family protein"
                     /calculated_mol_wt=14838
     Region          2..113
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mdhftivsdq leatrnfyvg vlglvegprp pfpvpgfwly tqeqpvlhvv gvsqmpeprr
       61 gvldhmafha qglqrmwkhl sehgvrfkvi rapgaertwq lfiqdpngve veldfdasev
      121 ppadwkerrg g
//
LOCUS       WP_235992754              98 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6124 family protein [Pseudomonas sp. p50(2008)].
ACCESSION   WP_235992754
VERSION     WP_235992754.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas sp. p50(2008)
  ORGANISM  Pseudomonas sp. p50(2008)
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039664.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19619.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Pseudomonas sp. p50(2008)"
                     /db_xref="taxon:2816832"
     Protein         1..98
                     /product="DUF6124 family protein"
                     /calculated_mol_wt=10491
     Region          17..84
                     /region_name="DUF6124"
                     /note="Family of unknown function (DUF6124); pfam19619"
                     /db_xref="CDD:437451"
ORIGIN      
        1 mkkshphspd rksfkpktrn dqlftvspdi nieallanas edllsisaia anladdvegr
       61 srsvalaisr madgvyllve rtldhidlpn savspvka
//
LOCUS       WP_235992798             137 aa            linear   BCT 02-MAR-2025
DEFINITION  Tn3 family transposase, partial [Brucella daejeonensis].
ACCESSION   WP_235992798
VERSION     WP_235992798.1
KEYWORDS    RefSeq.
SOURCE      Brucella daejeonensis (Ochrobactrum daejeonense)
  ORGANISM  Brucella daejeonensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 137)
  AUTHORS   Yurieva,O. and Nikiforov,V.
  TITLE     Catalytic center quest: comparison of transposases belonging to the
            Tn3 family reveals an invariant triad of acidic amino acid residues
  JOURNAL   Biochem Mol Biol Int 38 (1), 15-20 (1996)
   PUBMED   8932514
REFERENCE   2  (residues 1 to 137)
  AUTHORS   Fennewald,M.A., Gerrard,S.P., Chou,J., Casadaban,M.J. and
            Cozzarelli,N.R.
  TITLE     Purification of the Tn3 transposase and analysis of its binding to
            DNA
  JOURNAL   J Biol Chem 256 (10), 4687-4690 (1981)
   PUBMED   6262296
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013676.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01526.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Brucella daejeonensis"
                     /db_xref="taxon:659015"
     Protein         <1..137
                     /product="Tn3 family transposase"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <33..132
                     /region_name="transpos_Tn3"
                     /note="Tn3 family transposase; NF033527"
                     /db_xref="CDD:468061"
ORIGIN      
        1 rpknditpcw trhpwphnln qtvsgkpgav htdmqrraqi glnkgeahha lknalrigrq
       61 geirdrtteg qhyriaglnl ltaiiiywnt vhlshavver rnegldvppe llahisplgw
      121 ahilltgeyf wpidans
//
LOCUS       WP_235992840             412 aa            linear   BCT 02-MAR-2025
DEFINITION  iron-containing alcohol dehydrogenase [Brucella daejeonensis].
ACCESSION   WP_235992840
VERSION     WP_235992840.1
KEYWORDS    RefSeq.
SOURCE      Brucella daejeonensis (Ochrobactrum daejeonense)
  ORGANISM  Brucella daejeonensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012678.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00465.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Brucella daejeonensis"
                     /db_xref="taxon:659015"
     Protein         1..412
                     /product="iron-containing alcohol dehydrogenase"
                     /EC_number="1.1.1.1"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=42961
     Region          10..402
                     /region_name="DHQ_Fe-ADH"
                     /note="Dehydroquinate synthase-like (DHQ-like) and
                     iron-containing alcohol dehydrogenases (Fe-ADH); cl02872"
                     /db_xref="CDD:445950"
     Site            order(42,100..102,105,108,141..142,144,182,190,197,201,
                     281,285,295)
                     /site_type="active"
                     /db_xref="CDD:341447"
     Site            order(42,100..102,141..142,144,182,295)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:341447"
     Site            order(197,281,295)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:341447"
ORIGIN      
        1 mtnrlglglv rqpatvlfgp gqrhqlprvl sglakhvliv tdarmaadda fielatsvsn
       61 agvkvsvyda aqpelprsnv vdavnrfsda gveavvgigg gscldlakav aavlanggdv
      121 rdyfgefrvp gpslpivtls ttggtgaevt slaivfdeea gmkmaiadph iephaalidp
      181 eltltcppgl taataadals hlveaftakp knpspeqlat qiyvgknrit dmfcaeglrl
      241 mntalarvvn dpadiaarsd vmfaaycagm ainttgtaaa haiqspmaav ghaphgfgva
      301 allpyvmrfn lpyatnefae igrilgvadp rdqpllqara aisrieamlt evgapieias
      361 lgvtpadfdq iaqfsvtatr lvlnnpapmt pdtvralltr ayagdrgwwe kp
//
LOCUS       WP_235992904            1205 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein
            [Pseudomonas sp. p50(2008)].
ACCESSION   WP_235992904
VERSION     WP_235992904.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas sp. p50(2008)
  ORGANISM  Pseudomonas sp. p50(2008)
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 1205)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Pseudomonas sp. p50(2008)"
                     /db_xref="taxon:2816832"
     Protein         1..1205
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=132082
     Region          44..1175
                     /region_name="PRK09959"
                     /note="acid-sensing system histidine kinase EvgS"
                     /db_xref="CDD:182169"
ORIGIN      
        1 mtfgkwlvvl llsgalnava natmpaqtlq vlgrsqvdgy svvldegdre wlrakgtlll
       61 gasapdyppf gitgtgrdye gltadyaall agllqvrvev rrydsradvv ratklgevdl
      121 lgtsndfeaa dpelmmssay addqptlvtr tednqtltpd lagkqvamly hylppeavka
      181 hfpharlqly pstlsaigav afgtadvylg dsisanylin knylnnvqla gfldtqvhdf
      241 afsmhrdnqr llrivnaala vipasehlti lrrwsaggad mtglhalkfs taeqrwmdqh
      301 prirvaides flplsfygqd gkfrglgadv lakvalrtgl kfdiqrlhtv pelikqvetg
      361 qadvlisltp saerekslrf trpylstpyv lvtrmgtgsp atldemngkr lavirgtpvr
      421 sllmeqypai qlidadnaeq amtmvandka dgavnalita rymisrqfrd rlhvtstvgt
      481 gsarigfama rnapelysil dktllsippe eldelsnrwr sevvvddsyw lrhraaiiqg
      541 falaavllll algwiaylrq liakrrqaev alsdqlefmr vlidgtphpi yvrdregrll
      601 icntgylevf gierdvvvgk tviegmfksv qeaavyhedy lqvmkdglpr vqdrqltlga
      661 nvltiyhwml pyrasngevs gliggwidis erqrlvqalh eakdeaddan rakttflatm
      721 sheirtpmna vigmlelamk kadegvtdrf aievasgaar slldligdil dvsriesghl
      781 sltperanlg elvtsvarif eglarqkqlr lileldlgah rdvlidplrf kqivsnllsn
      841 aikftergev rlrvkvqtga daqrltvclq vadtgigisg ddqqrlfspf tqasnnpqsa
      901 rsgsglglvi srtlcemmgg qltlssvvgq gtqvdivldv pmlmpsnepa tapvepatss
      961 ralhilvvdd ypanrlvlsq qlsylghrvr daedgvqglr awrsesfdvv itdcnmpims
     1021 gyeltrtira eevarglppg lilgftanaq peekqrcqla gmddclfkpi sledlrdrla
     1081 slipintgas igtascelsd eidlsglhql trgddasikr llddlsasnd edmarlmrlf
     1141 tqhdvpglan lahrvkggar iikahalida cesleaaceg vnpgqlteav dalhqamdrl
     1201 aqrla
//
LOCUS       WP_235993016             459 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-binding domain-containing protein [Heyndrickxia
            sporothermodurans].
ACCESSION   WP_235993016
VERSION     WP_235993016.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia sporothermodurans
  ORGANISM  Heyndrickxia sporothermodurans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025114.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13738.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Heyndrickxia sporothermodurans"
                     /db_xref="taxon:46224"
     Protein         1..459
                     /product="NAD(P)-binding domain-containing protein"
                     /calculated_mol_wt=50782
     Region          31..>246
                     /region_name="CzcO"
                     /note="Predicted flavoprotein CzcO associated with the
                     cation diffusion facilitator CzcD [Inorganic ion transport
                     and metabolism]; COG2072"
                     /db_xref="CDD:441675"
ORIGIN      
        1 mrgkmkmewi evkptccqae eelkdtnkge skhlpvaiig agpvglaaaa hlarydqpfi
       61 ilesgsqvga niltwghvrv fspwrynide saskllkkqg wiepdlndlp tgkdlvdqyl
      121 kplantseik nslfvntkvl sisrknmdkm ktanrekqpf viyaeqnref kqfearavid
      181 atgtwgnpnp ansngiwlke ekaifnqtfy gipdilgvgk srylnkcvav igsghsains
      241 llelaklkee ypateiiwvl rkvrveeayg geeldalear gdlgsrihkl vdsgvvqvit
      301 pfriqnikgk ngkielvget kddlktysdi demivntgnr pdfsilrevr tsidtatesv
      361 kalaplidpn ihscgtvrph gekelrqpek dfyivgaksy graptflmat gyeqvrsvva
      421 ylsgdyease kvelelpetg vcstnqnvtk ascssnscc
//
LOCUS       WP_235992986            2706 aa            linear   BCT 02-MAR-2025
DEFINITION  dermonecrotic toxin domain-containing protein [Pseudomonas sp.
            p50(2008)].
ACCESSION   WP_235992986
VERSION     WP_235992986.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas sp. p50(2008)
  ORGANISM  Pseudomonas sp. p50(2008)
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 2706)
  AUTHORS   Kitadokoro,K., Kamitani,S., Miyazawa,M., Hanajima-Ozawa,M.,
            Fukui,A., Miyake,M. and Horiguchi,Y.
  TITLE     Crystal structures reveal a thiol protease-like catalytic triad in
            the C-terminal region of Pasteurella multocida toxin
  JOURNAL   Proc Natl Acad Sci U S A 104 (12), 5139-5144 (2007)
   PUBMED   17360394
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042510.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20178.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2706
                     /organism="Pseudomonas sp. p50(2008)"
                     /db_xref="taxon:2816832"
     Protein         1..2706
                     /product="dermonecrotic toxin domain-containing protein"
                     /calculated_mol_wt=302588
     Region          194..819
                     /region_name="DUF6543"
                     /note="Family of unknown function (DUF6543); pfam20178"
                     /db_xref="CDD:466329"
     Region          <1283..>1458
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          <1590..1882
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          1625..1647
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1648..1673
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1674..1695
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1696..1718
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1719..1738
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <1893..2113
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          1904..1927
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1928..1950
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1951..1976
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1977..1998
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1999..2021
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          2022..2045
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          2106..2466
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          2211..2231
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          2232..2254
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          2255..2280
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          2281..2302
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          2303..2325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          2326..2345
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <2498..>2675
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          2536..2558
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          2559..2584
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          2585..2606
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          2607..2629
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
ORIGIN      
        1 mrqarswepl pgrnrrvllq raqrtsespe eehppetger wgdckesfql glaakrqlli
       61 aqtpvyagft amrqiasqrr slncwrdyrq gcqdlicaar ehltyvpppy rviliclrff
      121 kcsrigtmql skewpptats dttesqhpdh hyqplkdaip dwlgtaspar rqalkntqpq
      181 rlgslngasa aqhqqlmaln aahwtaqtev dqtlahlqda nafaepllka alkrrfglev
      241 dvkstflrly vpattpwfpv ktgarawtvs lldaalhnfe eketrdtaye tdstyitqps
      301 asgqfdtlpf ikarmsipaf tslcreldig rqytryledn lgfsnptaas tlrlqvdasq
      361 kaalkaalhw armnkdiget ycrlieglid gvqgmrlngq pllchdltml sapltgivvf
      421 apdldqtrat arvvayvpdd pehpikeyas pltmvieltr qlrskdyqqf fsrfvnhdqr
      481 gfffaslndr lskvkwhspv agsseptwre tpidrpnlqt afvafndnlw qhlyqarldk
      541 ilndaraiav ptakvdqktr wafwdslidl assilqtaaf iiapfvpvlg eammaymayq
      601 lldeafegiv ewaqdrtkea fehfmgtves lvqlgafavg gtigatelrk vlpkevvafi
      661 drfkpvtmte gqtrywepdl aryeqkdipg adskanelgl hqhqgkqllp ldeahfavse
      721 sqvpgqyrie hptrpdaykp ilrhngdgaw hteleqplew dkttalrrig psidsfspaq
      781 reiilqvsgy nedalrkmhv nqeplpplla dtikrfkidq dlkafvdrld selpqdylsa
      841 dplvqlqlld esgrwqtgkr lryldqqgsv iwqsstdesl hlttirqdnl rdgdllktll
      901 ssldeseaka lleeefggps lsldrrartl rkhlvdlawq qrtsvfetry qaleriedpl
      961 aqpitqydpn lpvsitrell ntatgdellq isegqlpqrq qdlaqlanqe vrvtrayegl
     1021 eldavnnpdt dtlalhslkr lpgwtndvri eirdqsyegp ildssgrada saqkilvrqt
     1081 dgtyqpfddr gqelhsatdf ytsvlyalpd serqavniqa gqgdklkdai rkqpmersel
     1141 rlaislpave gadldtlrlv glegyrritr tvrtsrneat ftlqdrvlei yprhspeevd
     1201 alisrlrnhp agvrtelsrl sneyaqltad lrrwadeips adpdsglalt asqrraaqrn
     1261 rrllketvqs cwrketrgpv gyqlylpnsi lgelpaltad fghvvaltin sgtstrafep
     1321 fiqnfpglmf ldvqnlnlpn lppsiaamss lrqlivrncg itlspanqqv lsslrklsll
     1381 dlqdnplava pdirairalr hinlantgit elpvglldhp hvvigrfdgn qitslpdalf
     1441 naasnqgsal dfannplsat trarikahyn qtgnhfgvma eqadidrtis lfpdlnahqa
     1501 tnllyrlpgt lmqgrnqlth wegeilrlnn dlsqwasrip erspssgqll nnhqqageql
     1561 aryyfsrqld qawrsrlndq mvltlefmgd mpeltadfsh vsylsltgnt aisatspflq
     1621 rfpnlrhlgl rsfaleqipq aithmpelnt lilndcgvam nhasqtalss lsnldtlelt
     1681 nsplgqapdi talpalkyin lsnthithip vglvehpnis taifngnlit elpetvftlp
     1741 anrsdgfefa dnplsaasre riktyfretg qdfgvpadqa didimkalfp aldsqdasda
     1801 iydlpgtlqd srrqlvhwra elnqltadlt twapqvparh pvtseaftap qlydqyasrs
     1861 efgqtlerfw rrriemsrmr ddhlvinltf sgdlppltad fghvsrltln gndailatdp
     1921 fldlfpnlqs lemrnftleq vppaitgmst lkelhlslcr valtpegqti lsslselevl
     1981 nlsdnplmia pnvetlpaln elrlsntgis dlpkgltsrq hlrtailngn qitelpdaff
     2041 dldldlaegv nlannplssm srdrikafya kngtdfavla eqadidrara lfpglsteda
     2101 shviytlpgt ledsrsqltr weteisqlth dlkdwaadvp srhpstgasl nphelltert
     2161 vrnefrekle qfwrlrrvgr pelredafit dlafmgelpv ltadfshvsa lalsgnsaln
     2221 assgflecfp glqhlelrdf alnhiprsit gmpsleklvl sncgvalgse gqailsslpr
     2281 ldmldlfnnp lgsvpdvaam paltfidlss tgidhvpvgw snhprlqtav lnnnriteip
     2341 pdlynlsaev gegfdfghnp lsevtlervk tyhrqtgkdl gvladqgdid qvlalypgls
     2401 leqaseyiyr lpgtladgrv elmrkraeld alsrdldvwm tdipdhpvtg epleplillq
     2461 eqhkrlkfkk svercwrqip aedssfgett fasnlvilgd lpllttqfph vselylrvdg
     2521 amasrasrfl eyfpnleslg vqgyqldnip eavfkmrnlt slslpdcrit ltqttlnaln
     2581 gmekldslnl rgnplgltpd lsnmrglftl dlsntgiret piglfdnprl mhadlsnnmi
     2641 teipielmea npdntenfnf rgnplsaqsl ervaahfhdt gntlgigavt gmsrpadiap
     2701 dvdmes
//
LOCUS       WP_235993133             284 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Heyndrickxia sporothermodurans].
ACCESSION   WP_235993133
VERSION     WP_235993133.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia sporothermodurans
  ORGANISM  Heyndrickxia sporothermodurans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
REFERENCE   1  (residues 1 to 284)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07883.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Heyndrickxia sporothermodurans"
                     /db_xref="taxon:46224"
     Protein         1..284
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=32424
     Region          14..135
                     /region_name="YhjR"
                     /note="Rubrerythrin, includes spore coat protein YhjR
                     [Inorganic ion transport and metabolism]; COG1633"
                     /db_xref="CDD:441240"
     Region          168..271
                     /region_name="cupin_Bh2720-like"
                     /note="Bacillus halodurans Bh2720 and related proteins,
                     cupin domain; cd02223"
                     /db_xref="CDD:380352"
ORIGIN      
        1 mlrnsqgkdr lvfeaildgi kgeasaidly srlvnlapnq khkndilnil edekvhwqqh
       61 tnlyismtgr qpvyqiekvs frnyreglqk ayetelanye eyrndylllq nspvgdvflr
      121 astdemehak rlsflksfks kdkielkdyg pepfivniqe atkqnntyrt alwtgrhlqv
      181 tlmsinvged igleihptvd qflrieqgqg ivqmgdrkdn ldfaekvyen faimvpagkw
      241 hnvtntgnip lklysiyapp qhphgtvhvt kadamasgrg fman
//
LOCUS       WP_235993165             412 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3231 family protein [Heyndrickxia sporothermodurans].
ACCESSION   WP_235993165
VERSION     WP_235993165.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia sporothermodurans
  ORGANISM  Heyndrickxia sporothermodurans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022986.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11553.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Heyndrickxia sporothermodurans"
                     /db_xref="taxon:46224"
     Protein         1..412
                     /product="DUF3231 family protein"
                     /calculated_mol_wt=45458
     Region          35..>115
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Region          75..239
                     /region_name="DUF3231"
                     /note="Protein of unknown function (DUF3231); pfam11553"
                     /db_xref="CDD:402931"
     Region          253..406
                     /region_name="DUF3231"
                     /note="Protein of unknown function (DUF3231); pfam11553"
                     /db_xref="CDD:402931"
ORIGIN      
        1 mglhqvsihq ehqqtkisvk sktllliigi ifiganlrap itavgpliss irdslgisni
       61 lagtlttvpl lafallspfa pklsrkygme gtlfvslill tagivlrtip gvgtlipkad
      121 dhksekimtd lykdldknve rikhifekag salpvgftsq dvnveaprlf engldimflr
      181 mikevsmgly tlnmgkayre diinlykdlt aitqgcynkc tqyllekgml trppfvpmpk
      241 tnefindmky lsglnllsna rhintielss lfhgmesnnl gmtlmfaftq vaeakevkqy
      301 fhkgmeiskk ilkqfgeill edditptiss vgnvssskis pfsdkfmlyc nsllcnlslg
      361 gnafgfafsl rndlqlkall aakdvadyan dgnklmvkng wlekppatnl er
//
LOCUS       WP_235993205             723 aa            linear   BCT 02-MAR-2025
DEFINITION  CDP-glycerol glycerophosphotransferase family protein [Heyndrickxia
            sporothermodurans].
ACCESSION   WP_235993205
VERSION     WP_235993205.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia sporothermodurans
  ORGANISM  Heyndrickxia sporothermodurans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
REFERENCE   1  (residues 1 to 723)
  AUTHORS   Fitzgerald,S.N. and Foster,T.J.
  TITLE     Molecular analysis of the tagF gene, encoding
            CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase of
            Staphylococcus epidermidis ATCC 14990
  JOURNAL   J Bacteriol 182 (4), 1046-1052 (2000)
   PUBMED   10648531
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016357.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04464.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Heyndrickxia sporothermodurans"
                     /db_xref="taxon:46224"
     Protein         1..723
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0047355 - CDP-glycerol
                     glycerophosphotransferase activity [Evidence IEA]"
                     /calculated_mol_wt=85641
     Region          343..717
                     /region_name="Glyphos_transf"
                     /note="CDP-Glycerol:Poly(glycerophosphate)
                     glycerophosphotransferase; cl42225"
                     /db_xref="CDD:478041"
ORIGIN      
        1 mrnkiyiile eldtisnksk nailfnienf csdiivrqlg ytkleiqnak nqviyllddl
       61 ltndyseivl nheidikiee adsrfvllsk infgiynyvv tydvykkemi ftkilfniie
      121 grndieinik srnmitiknr lsdsekniyf nrikkrkpkk vfdeievekf gevniltifv
      181 lnkrryyvyl qrngvfiaks nayrvtrhka nlkifgtknh fflfgrfghs aynaemkfdy
      241 lyvlntdhmi akfkrpfrki kllkyfgyfk ipisslnndd rihsnlfvgs rdkiihnlkf
      301 kysdkkvkty ifrryqgnlv virtnlqgni ttttipfaee ytsrsrikiq iakiisklfk
      361 kqnynvnlyf ekksnkddes gfrvfekvms dvkhtkskny filnkdsshy qmmkkkygks
      421 iiekysfkhy lsiynanyfi sselsnhvln drlyidslrn kimtiplvfl qhgimfakpv
      481 dnpmafgfhk dknlynmyks visspleage ffkmnydeed liltglatld yaklakdadr
      541 iafmptyryw eesliyhnni eettyyktii kiiksfqseg llnkllivph nkfsehiyen
      601 mpeyrdiicd npsealkisk ifitdyssai ydaiyrgayp ifyweekdyl inqykaippv
      661 nednapgpvv ynvnelinav qhaisknyll edifkekylk inifndnkns erivqflqnd
      721 gii
//
LOCUS       WP_235993307             291 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: metal ABC transporter solute-binding protein, Zn/Mn
            family [Gluconobacter].
ACCESSION   WP_235993307
VERSION     WP_235993307.1
KEYWORDS    RefSeq.
SOURCE      Gluconobacter
  ORGANISM  Gluconobacter
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (residues 1 to 291)
  AUTHORS   Ilari,A., Alaleona,F., Tria,G., Petrarca,P., Battistoni,A.,
            Zamparelli,C., Verzili,D., Falconi,M. and Chiancone,E.
  TITLE     The Salmonella enterica ZinT structure, zinc affinity and
            interaction with the high-affinity uptake protein ZnuA provide
            insight into the management of periplasmic zinc
  JOURNAL   Biochim Biophys Acta 1840 (1), 535-544 (2014)
   PUBMED   24128931
REFERENCE   2  (residues 1 to 291)
  AUTHORS   Gabbianelli,R., Scotti,R., Ammendola,S., Petrarca,P., Nicolini,L.
            and Battistoni,A.
  TITLE     Role of ZnuABC and ZinT in Escherichia coli O157:H7 zinc
            acquisition and interaction with epithelial cells
  JOURNAL   BMC Microbiol 11, 36 (2011)
   PUBMED   21338480
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 291)
  AUTHORS   Lee,Y.H., Deka,R.K., Norgard,M.V., Radolf,J.D. and Hasemann,C.A.
  TITLE     Treponema pallidum TroA is a periplasmic zinc-binding protein with
            a helical backbone
  JOURNAL   Nat Struct Biol 6 (7), 628-633 (1999)
   PUBMED   10404217
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013465.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01297.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Gluconobacter"
                     /db_xref="taxon:441"
     Protein         1..291
                     /product="metal ABC transporter solute-binding protein,
                     Zn/Mn family"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=30454
     Region          28..286
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(95..96,99,137)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238347"
ORIGIN      
        1 mmrffpalll aalisgsvav aqaepsqapv rvvcveaawc dvvaqiggad vqtqallatp
       61 gidphdltps psmaramaga tiavvngaty ddwalpftas vperivvasl agwrpgdnph
      121 lfldpaavgk vaqvfadrls hqpgisapav aerlaifrke ldgvtdrlaa mkarheavpv
      181 aavepvgetl lrdaglavld enfalaimnh aepsprdvaq vdmlidgrkv rmlmtnpaih
      241 spqidrlvdr aqavglpvva igetlppgqs wqgwvhgilq tveqalgdgg k
//
LOCUS       WP_235993428             367 aa            linear   BCT 02-MAR-2025
DEFINITION  linear amide C-N hydrolase [Gluconobacter cadivus].
ACCESSION   WP_235993428
VERSION     WP_235993428.1
KEYWORDS    RefSeq.
SOURCE      Gluconobacter cadivus
  ORGANISM  Gluconobacter cadivus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae; Gluconobacter.
REFERENCE   1  (residues 1 to 367)
  AUTHORS   Coleman,J.P. and Hudson,L.L.
  TITLE     Cloning and characterization of a conjugated bile acid hydrolase
            gene from Clostridium perfringens
  JOURNAL   Appl Environ Microbiol 61 (7), 2514-2520 (1995)
   PUBMED   7618863
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014345.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02275.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Gluconobacter cadivus"
                     /db_xref="taxon:2728101"
     Protein         1..367
                     /product="linear amide C-N hydrolase"
                     /calculated_mol_wt=40021
     Region          24..344
                     /region_name="Ntn_hydrolase"
                     /note="The Ntn hydrolases (N-terminal nucleophile) are a
                     diverse superfamily of of enzymes that are activated
                     autocatalytically via an N-terminally lcated nucleophilic
                     amino acid. N-terminal nucleophile (NTN-) hydrolase
                     superfamily, which contains a...; cl00467"
                     /db_xref="CDD:469781"
     Site            order(24,41,43,97)
                     /site_type="active"
                     /db_xref="CDD:238884"
ORIGIN      
        1 mkitslssmm lssvllfpai gqacsslait dnkghvfhgr tlelpedlps wvtfypaqta
       61 fqkkapngsa gahykslypi laittpvydd gddhnmlegm ngaglsfsan mvpdatltpl
      121 aesdylesvp vtslgewala nfatvdevrk avdnghfwsp vlarlggvks pfhfafydkn
      181 ggsivvetln gkfhvydnpt kvmtngpdfp whlqnlnnyt qltnqdrsaa tlggikvvqp
      241 dsgiaasdlp ssdtsvgrfi rgvyytsyap vaqssgdavn ilahimnrfd rmknittdtl
      301 ggetqkesgk tvseytvwta lsdlsdgvmf vrgykdisyr kfsfqtfhdt pkpvfekinn
      361 rdlavpy
//
LOCUS       WP_235993474             838 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein [Paraburkholderia solitsugae].
ACCESSION   WP_235993474
VERSION     WP_235993474.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia solitsugae
  ORGANISM  Paraburkholderia solitsugae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..838
                     /organism="Paraburkholderia solitsugae"
                     /db_xref="taxon:2675748"
     Protein         1..838
                     /product="DUF6531 domain-containing protein"
                     /calculated_mol_wt=90015
     Region          106..167
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
     Region          <218..>570
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
ORIGIN      
        1 mgfnqaqqir mtmknnrvte npagiagrll aafmllmfaf ganaadcnav wtatgakpgs
       61 ptcrwdayag vpggiqyync aslplidawc atptteepea scpvadpvyp gngavtltee
      121 dfvsgddipm rftrtyrsks lgnsatamgp vwfhswqrnl glanansgss skvlayrgns
      181 epvtfnwsag twrtagftgl aliqngsgwt ltdlktdtve sysaqgvlls eslktgfvrt
      241 ltyggsgllt titqhaagtd annditlrld yddknrlsrl ndplgrmtqy gydasgnlvs
      301 vtwpdgyarr yvyddarfkn altgeideag nrvatwsyda qgratavshp naaqnvqfay
      361 ntgstvitgs kgattlsmss iggmlrptgt tstagnssst wdasgnllkd adasggtsey
      421 syddtgrpvr aivrsaygts istiryadat slrpsmiasp rliqsfvyda ngnttgvsei
      481 pttdptgasa fdagkadgva maygmtydaf nrlafvqqma ngkvagqwkv trdatgnafa
      541 iialgeiqda temisrdaah rvlygynptg dfylrydrra ridlfkfmey aspanggirr
      601 vfkvrfgysp dgqvvsrtgt vakdgsvldl ndgtdipiss deinqwidny nygdspvgpp
      661 anlqgtrrll gdnflgtstv csgchfsagl idgtvrgivl vyrllqnpvv rygigqgtkk
      721 vaenwerike mckpaaetev dgippgrtts ewteitegss vrnvetdvsk tefeanlrne
      781 gwtqtlskdg ktdiftkgdl kytvrehsna ggptaeyfpp gakqgtlkir ldrpqggk
//
LOCUS       WP_235993427             325 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: exodeoxyribonuclease VII large subunit
            [Gluconobacter].
ACCESSION   WP_235993427
VERSION     WP_235993427.1
KEYWORDS    RefSeq.
SOURCE      Gluconobacter
  ORGANISM  Gluconobacter
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (residues 1 to 325)
  AUTHORS   Vales,L.D., Rabin,B.A. and Chase,J.W.
  TITLE     Subunit structure of Escherichia coli exonuclease VII
  JOURNAL   J Biol Chem 257 (15), 8799-8805 (1982)
   PUBMED   6284744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014640.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02601.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Gluconobacter"
                     /db_xref="taxon:441"
     Protein         1..325
                     /product="exodeoxyribonuclease VII large subunit"
                     /GO_function="GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA]"
                     /calculated_mol_wt=35325
ORIGIN      
        1 mtvlsplqvq dlfsarleei caafddwgfp livagqlgda apnsypkyyq lpltdpqfgt
       61 alslevqksv laragigpgd yvhvtgmlra rqyrgqivlr feavavelhd parqkverae
      121 rsvldvlrgl pcishpyptr pearlllihs aassalvaed flqalggawr pervrslpta
      181 mndpgrlaea igtcreeivv lirgggdasd fvvfespqvm ealavcpahr vlgvghtanr
      241 tlaervvdha attpadaghy irrmsgriwq eqeearaqqe emaalrdsva lniaperapi
      301 gtrlrnglil laiglmlgll ltrll
//
LOCUS       WP_235993530             292 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: helix-turn-helix domain-containing protein
            [Gluconobacter].
ACCESSION   WP_235993530
VERSION     WP_235993530.1
KEYWORDS    RefSeq.
SOURCE      Gluconobacter
  ORGANISM  Gluconobacter
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Gluconobacter"
                     /db_xref="taxon:441"
     Protein         1..292
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=32030
     Region          9..90
                     /region_name="cupin_MtlR-like_N"
                     /note="AraC/XylS family transcriptional regulators similar
                     to MtlR, N-terminal cupin domain; cd06976"
                     /db_xref="CDD:380381"
     Region          <194..277
                     /region_name="GlxA"
                     /note="Transcriptional regulator GlxA, contains an amidase
                     domain and an AraC-type DNA-binding HTH domain
                     [Transcription]; COG4977"
                     /db_xref="CDD:444002"
ORIGIN      
        1 mihadpntsf rwhqhdypgp larwnhhpey elhlitqseg raiigdhigs fgprqlvlvg
       61 pdlphgwfsp lkpgevltgr divlqfsakw idclitlcpe lgglrnllqa salgveftgp
      121 ealglgekle aigtfqgsgr ltacldllat ltsapfrtls lkgeskglds pemqrmsgvi
      181 tslmamdpse irhdhlaqnl glcastfsrq fraatgdtfm sflhrlrvch achllassrl
      241 siteigaasg fnnlsnfnri flrlrgctpr eyrrqaremt afsptgaadf ln
//
LOCUS       WP_235993540             365 aa            linear   BCT 02-MAR-2025
DEFINITION  thiolase C-terminal domain-containing protein [Paraburkholderia
            solitsugae].
ACCESSION   WP_235993540
VERSION     WP_235993540.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia solitsugae
  ORGANISM  Paraburkholderia solitsugae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 365)
  AUTHORS   Brown,A.K., Sridharan,S., Kremer,L., Lindenberg,S., Dover,L.G.,
            Sacchettini,J.C. and Besra,G.S.
  TITLE     Probing the mechanism of the Mycobacterium tuberculosis
            beta-ketoacyl-acyl carrier protein synthase III mtFabH: factors
            influencing catalysis and substrate specificity
  JOURNAL   J Biol Chem 280 (37), 32539-32547 (2005)
   PUBMED   16040614
REFERENCE   2  (residues 1 to 365)
  AUTHORS   Kursula,P., Ojala,J., Lambeir,A.M. and Wierenga,R.K.
  TITLE     The catalytic cycle of biosynthetic thiolase: a conformational
            journey of an acetyl group through four binding modes and two
            oxyanion holes
  JOURNAL   Biochemistry 41 (52), 15543-15556 (2002)
   PUBMED   12501183
REFERENCE   3  (residues 1 to 365)
  AUTHORS   Scarsdale,J.N., Kazanina,G., He,X., Reynolds,K.A. and Wright,H.T.
  TITLE     Crystal structure of the Mycobacterium tuberculosis
            beta-ketoacyl-acyl carrier protein synthase III
  JOURNAL   J Biol Chem 276 (23), 20516-20522 (2001)
   PUBMED   11278743
REFERENCE   4  (residues 1 to 365)
  AUTHORS   Modis,Y. and Wierenga,R.K.
  TITLE     Crystallographic analysis of the reaction pathway of Zoogloea
            ramigera biosynthetic thiolase
  JOURNAL   J Mol Biol 297 (5), 1171-1182 (2000)
   PUBMED   10764581
REFERENCE   5  (residues 1 to 365)
  AUTHORS   Mathieu,M., Modis,Y., Zeelen,J.P., Engel,C.K., Abagyan,R.A.,
            Ahlberg,A., Rasmussen,B., Lamzin,V.S., Kunau,W.H. and Wierenga,R.K.
  TITLE     The 1.8 A crystal structure of the dimeric peroxisomal
            3-ketoacyl-CoA thiolase of Saccharomyces cerevisiae: implications
            for substrate binding and reaction mechanism
  JOURNAL   J Mol Biol 273 (3), 714-728 (1997)
   PUBMED   9402066
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047238.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22691.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Paraburkholderia solitsugae"
                     /db_xref="taxon:2675748"
     Protein         1..365
                     /product="thiolase C-terminal domain-containing protein"
                     /calculated_mol_wt=38815
     Region          1..362
                     /region_name="PRK06158"
                     /note="thiolase; Provisional"
                     /db_xref="CDD:180434"
ORIGIN      
        1 mgkvpemsqi qlhadaalna ladaglrpsd idgiatagep petvahylgi kprwidgtgv
       61 ggcsfmlhlr hamaaiesgl crtvlvthge sgrsrvaptg fpipvpgsll qqfetpfgtt
      121 ypptmfsipv lrylkqhgld esalasvavv qrqwaalnpr asqkdpitie dvlaskmivy
      181 pfrllmccvv tdgggaivlt sadrapdlhe rpvyiigage scetpmisqm edfttsaafr
      241 ragrdafaea gishtdvdhl mlydafahlp lygledlgfc qpgeaasfir egntapggrl
      301 pvntngggls ymhsgmygmy alqesirqvr giaaaqvpdv eisvahgvgg mfytsgtvvf
      361 srtrp
//
LOCUS       WP_235993629             657 aa            linear   BCT 02-MAR-2025
DEFINITION  GmrSD restriction endonuclease domain-containing protein
            [Paraburkholderia solitsugae].
ACCESSION   WP_235993629
VERSION     WP_235993629.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia solitsugae
  ORGANISM  Paraburkholderia solitsugae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 657)
  AUTHORS   Gao,H., Gong,X., Zhou,J., Zhang,Y., Duan,J., Wei,Y., Chen,L.,
            Deng,Z., Wang,J., Chen,S., Wu,G. and Wang,L.
  TITLE     Nicking mechanism underlying the DNA phosphorothioate-sensing
            antiphage defense by SspE
  JOURNAL   Nat Commun 13 (1), 6773 (2022)
   PUBMED   36351933
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 657)
  AUTHORS   Picton,D.M., Luyten,Y.A., Morgan,R.D., Nelson,A., Smith,D.L.,
            Dryden,D.T.F., Hinton,J.C.D. and Blower,T.R.
  TITLE     The phage defence island of a multidrug resistant plasmid uses both
            BREX and type IV restriction for complementary protection from
            viruses
  JOURNAL   Nucleic Acids Res 49 (19), 11257-11273 (2021)
   PUBMED   34657954
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015210.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03235.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Paraburkholderia solitsugae"
                     /db_xref="taxon:2675748"
     Protein         1..657
                     /product="GmrSD restriction endonuclease domain-containing
                     protein"
                     /calculated_mol_wt=74115
     Region          43..627
                     /region_name="COG3472"
                     /note="Uncharacterized conserved protein domain, often
                     C-terminal to DUF262 [Function unknown]"
                     /db_xref="CDD:442695"
ORIGIN      
        1 mnvyvhsenh tcsittenks tmarsafqtn piflrelldd chdgalqlpd fqrswvwded
       61 riksliasis rafpvgalmt letggdiefk prpvegapde aktarprsll ldgqqrmtsl
      121 yqvtlrgkvv etvtpknkkv krwfyidiak amdpscdred aivgvpedrv irkdfgrsev
      181 ldlttpqrey etlmypvsrv fdwdswqdgf ddhwkndana daqktlfraf kqailenfkq
      241 yrvpvialdr stskeavcvv fekvntggkp ldafelvtam yaadghelrk dwfgkdkekg
      301 rqsrfaetlr pagatsgiia nvtntdflqa islfytrekr reaeragksg kdlpavsgnr
      361 qallslplda ykkyeaqvet gfvhaakflh mlhiyrlfdl pyqsqivpla ailadigsaw
      421 ehdtiraklv qwywngvfge lygsavdsrf srdflevptw lnggpepttv settfradrl
      481 ktmrmrlsaa ykgvnallmk kgaedfrsgq kfdhivffge nvdihhifpq dwcksqgikp
      541 avfdsiinkt plsyrtnrii ggvapsqylg kleagnstsp pisparldeh irshlinpel
      601 lrgdsfeafm adrqnqllvl ieeamgkray tgdaheeged yeseeatdea dltiaaa
//
LOCUS       WP_235993189              61 aa            linear   BCT 02-MAR-2025
DEFINITION  YicC/YloC family endoribonuclease [Heyndrickxia sporothermodurans].
ACCESSION   WP_235993189
VERSION     WP_235993189.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia sporothermodurans
  ORGANISM  Heyndrickxia sporothermodurans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
REFERENCE   1  (residues 1 to 61)
  AUTHORS   Ingle,S., Chhabra,S., Chen,J., Lazarus,M.B., Luo,X. and
            Bechhofer,D.H.
  TITLE     Discovery and initial characterization of YloC, a novel
            endoribonuclease in Bacillus subtilis
  JOURNAL   RNA 28 (2), 227-238 (2022)
   PUBMED   34815358
REFERENCE   2  (residues 1 to 61)
  AUTHORS   Chen,J., To,L., de Mets,F., Luo,X., Majdalani,N., Tai,C.H. and
            Gottesman,S.
  TITLE     A fluorescence-based genetic screen reveals diverse mechanisms
            silencing small RNA signaling in E. coli
  JOURNAL   Proc Natl Acad Sci U S A 118 (27) (2021)
   PUBMED   34210798
REFERENCE   3  (residues 1 to 61)
  AUTHORS   Poulsen,P. and Jensen,K.F.
  TITLE     Three genes preceding pyrE on the Escherichia coli chromosome are
            essential for survival and normal cell morphology in stationary
            culture and at high temperature
  JOURNAL   Res Microbiol 142 (2-3), 283-288 (1991)
   PUBMED   1925027
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015699.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03755.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..61
                     /organism="Heyndrickxia sporothermodurans"
                     /db_xref="taxon:46224"
     Protein         1..61
                     /product="YicC/YloC family endoribonuclease"
                     /GO_function="GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /calculated_mol_wt=7046
     Region          5..>53
                     /region_name="YicC_N"
                     /note="YicC-like family, N-terminal region; pfam03755"
                     /db_xref="CDD:461041"
ORIGIN      
        1 mlmfsmtgyg sskkdstrfg vfveiksvnh rfseinirmp rqlmkiddki kkvsqfhncs
       61 f
//
LOCUS       WP_235993645             267 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin-dependent oxidoreductase [Paraburkholderia
            solitsugae].
ACCESSION   WP_235993645
VERSION     WP_235993645.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia solitsugae
  ORGANISM  Paraburkholderia solitsugae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 267)
  AUTHORS   Kisker,C., Schindelin,H., Pacheco,A., Wehbi,W.A., Garrett,R.M.,
            Rajagopalan,K.V., Enemark,J.H. and Rees,D.C.
  TITLE     Molecular basis of sulfite oxidase deficiency from the structure of
            sulfite oxidase
  JOURNAL   Cell 91 (7), 973-983 (1997)
   PUBMED   9428520
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012401.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00174.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Paraburkholderia solitsugae"
                     /db_xref="taxon:2675748"
     Protein         1..267
                     /product="molybdopterin-dependent oxidoreductase"
                     /calculated_mol_wt=29922
     Region          89..265
                     /region_name="SO_family_Moco"
                     /note="Sulfite oxidase (SO) family, molybdopterin binding
                     domain. This molybdopterin cofactor (Moco) binding domain
                     is found in a variety of oxidoreductases, main members of
                     this family are nitrate reductase (NR) and sulfite oxidase
                     (SO). SO catalyzes the...; cl00199"
                     /db_xref="CDD:469652"
     Site            order(106,108,110,154,193,222,227,235,238,240..241)
                     /site_type="active"
                     /note="Moco binding site [active]"
                     /db_xref="CDD:238198"
     Site            154
                     /site_type="other"
                     /note="metal coordination site [ion binding]"
                     /db_xref="CDD:238198"
ORIGIN      
        1 mtkpatqpdr klasmldnkl dresilidar relampsrrl fgkrlltlgg lsmltgcslt
       61 dndsvnaflt avsrlndraq aalfdpkqla ptyteaqitr pfpfnafygi edvpdvdasd
      121 yklkisglvt gqrvwtlpel yalphaeqit rhicvegwsa igrwggtpfa dflrrigadt
      181 sakyvgfkca ddyyesidmp talhpqtllt feydgerlpa kygfpmklrm ptklgyknpk
      241 hivemfvtnt ypggywvdqg ynwfggs
//
LOCUS       WP_235993671             160 aa            linear   BCT 02-MAR-2025
DEFINITION  Spy/CpxP family protein refolding chaperone [Paraburkholderia
            solitsugae].
ACCESSION   WP_235993671
VERSION     WP_235993671.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia solitsugae
  ORGANISM  Paraburkholderia solitsugae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 160)
  AUTHORS   Kwon,E., Kim,D.Y., Gross,C.A., Gross,J.D. and Kim,K.K.
  TITLE     The crystal structure Escherichia coli Spy
  JOURNAL   Protein Sci 19 (11), 2252-2259 (2010)
   PUBMED   20799348
REFERENCE   2  (residues 1 to 160)
  AUTHORS   Danese,P.N. and Silhavy,T.J.
  TITLE     CpxP, a stress-combative member of the Cpx regulon
  JOURNAL   J Bacteriol 180 (4), 831-839 (1998)
   PUBMED   9473036
REFERENCE   3  (residues 1 to 160)
  AUTHORS   Hagenmaier,S., Stierhof,Y.D. and Henning,U.
  TITLE     A new periplasmic protein of Escherichia coli which is synthesized
            in spheroplasts but not in intact cells
  JOURNAL   J Bacteriol 179 (6), 2073-2076 (1997)
   PUBMED   9068658
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07813.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Paraburkholderia solitsugae"
                     /db_xref="taxon:2675748"
     Protein         1..160
                     /product="Spy/CpxP family protein refolding chaperone"
                     /GO_component="GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /calculated_mol_wt=17062
ORIGIN      
        1 mkrtttpfqr qpmpvlaagl llaiatlaap asaatpgetq asahvmtvaa htpvdtrins
       61 lharlqitad qeslwqpvaq vmrdnagtmd slrqsrmana nsmsavddlr sygqvvdaha
      121 dgikkltsaf ealynsmsdt qkhnadlifr sdthhaakkg
//
LOCUS       WP_235993746              74 aa            linear   BCT 02-MAR-2025
DEFINITION  enoyl-CoA hydratase-related protein, partial [Paraburkholderia
            solitsugae].
ACCESSION   WP_235993746
VERSION     WP_235993746.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia solitsugae
  ORGANISM  Paraburkholderia solitsugae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012596.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00378.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Paraburkholderia solitsugae"
                     /db_xref="taxon:2675748"
     Protein         <1..74
                     /product="enoyl-CoA hydratase-related protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..73
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
ORIGIN      
        1 vdafaaaqat klaalpassl rmtkslmkra shhelqtqmt eeavhfakml iapeareafk
       61 affekrkpdf rqfd
//
LOCUS       WP_235993758             388 aa            linear   BCT 02-MAR-2025
DEFINITION  HPP family protein [Paraburkholderia solitsugae].
ACCESSION   WP_235993758
VERSION     WP_235993758.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia solitsugae
  ORGANISM  Paraburkholderia solitsugae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 388)
  AUTHORS   Maeda,S., Konishi,M., Yanagisawa,S. and Omata,T.
  TITLE     Nitrite transport activity of a novel HPP family protein conserved
            in cyanobacteria and chloroplasts
  JOURNAL   Plant Cell Physiol 55 (7), 1311-1324 (2014)
   PUBMED   24904028
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016843.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04982.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Paraburkholderia solitsugae"
                     /db_xref="taxon:2675748"
     Protein         1..388
                     /product="HPP family protein"
                     /calculated_mol_wt=40832
     Region          56..176
                     /region_name="HPP"
                     /note="HPP family; pfam04982"
                     /db_xref="CDD:461506"
     Region          246..378
                     /region_name="CBS_pair_HPP_assoc"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains associated with the HPP
                     motif domain; cd04600"
                     /db_xref="CDD:341375"
     Site            order(247,249..251,273..275,353,366,368,370..371,374)
                     /site_type="other"
                     /note="putative ligand binding site II [chemical binding]"
                     /db_xref="CDD:341375"
     Region          247..326
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341375"
     Site            order(273,286,290..291,294,331,353..355,370)
                     /site_type="other"
                     /note="putative ligand binding site I [chemical binding]"
                     /db_xref="CDD:341375"
     Region          331..374
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341375"
ORIGIN      
        1 mfrsiaiswl ssfipapitv kwqerarscl gallgiaftg gsmhlllgha anipllvapm
       61 gasavllfav pasllaqpws ivggnlvsat igvtcastia dpilaaalav alsicgmfal
      121 rcvhppsgav altavlggpt vhalgyafvl epiaaqsval lfaailyhaa tghryphagr
      181 qnrgqagtpa deasrsgftr adleavlkrr semldidpdd lesllretql qafsrtfnel
      241 tcadimsghv vtvapdtrta aawgllkrnh vkalpvvdpa qrllgivtra dlidkrtlgk
      301 tssiaayfdg wlrrdplsap nvgtvmstev ctveaaspit dlvpmfanyg hhhipvldat
      361 gqvvgmitqv dlisglyrqt fakdkqpa
//
LOCUS       WP_235994123            2255 aa            linear   BCT 02-MAR-2025
DEFINITION  FtsK/SpoIIIE domain-containing protein [Nonomuraea montanisoli].
ACCESSION   WP_235994123
VERSION     WP_235994123.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea montanisoli
  ORGANISM  Nonomuraea montanisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
REFERENCE   1  (residues 1 to 2255)
  AUTHORS   Begg,K.J., Dewar,S.J. and Donachie,W.D.
  TITLE     A new Escherichia coli cell division gene, ftsK
  JOURNAL   J Bacteriol 177 (21), 6211-6222 (1995)
   PUBMED   7592387
REFERENCE   2  (residues 1 to 2255)
  AUTHORS   Wu,L.J. and Errington,J.
  TITLE     Bacillus subtilis SpoIIIE protein required for DNA segregation
            during asymmetric cell division
  JOURNAL   Science 264 (5158), 572-575 (1994)
   PUBMED   8160014
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013727.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01580.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2255
                     /organism="Nonomuraea montanisoli"
                     /db_xref="taxon:2741721"
     Protein         1..2255
                     /product="FtsK/SpoIIIE domain-containing protein"
                     /GO_function="GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=235219
     Region          150..>202
                     /region_name="Yop-YscD_cpl"
                     /note="Inner membrane component of T3SS, cytoplasmic
                     domain; pfam16697"
                     /db_xref="CDD:465238"
     Region          348..963
                     /region_name="T7SS_EccC_a"
                     /note="type VII secretion protein EccCa; TIGR03924"
                     /db_xref="CDD:274858"
     Region          <946..1373
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1550..1723
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          1745..2249
                     /region_name="T7SS_EccC_b"
                     /note="type VII secretion protein EccCb; TIGR03925"
                     /db_xref="CDD:274859"
ORIGIN      
        1 mrimltvlge rgdrdivldg ddgatvaavs ealdqreplt nvvrlprara pydpsgaasp
       61 swgaepgarr aergprradt gapgagrgtq rtepggrnag sggtlwrngr pldprapata
      121 vlrdgdkvtl dphlapativ eepggvaevr vvggpaagav hrlglgvhvi gsdpmcaltv
      181 adpalapeav vlrvtpgait aepvrravpd aprlklkgrw adevaemtar vaerqaaeaa
      241 seswqppeld grpldgpadw lehavltcgs svfaltaiep qdahlaprpe ggvaynrppr
      301 lrrsageraf erpaeprrse gmrlqllaaf lpavlgctla yvmhqwyfll malmtpvimi
      361 gqwwsdrrhg rkqhrkalke fherlrayer aveqararde vtrrsdapdp aevlltatgp
      421 rrrlwerrih dpdalrlrig ladlpadldl teeqggpidp pvcravpval amrrlgvagi
      481 tgprdaatgl agwlvgqaat lhsprdlaiv vlsargdger rwgwvrwlph capragedcv
      541 alvgtdpesa arrvaelaal iderqntaip elgkiptgwd dlggperpvf styddrpydv
      601 lvlldgaqal rglpgmpqvl rqgpragvyt laidedqrll peecataaac gtdgyvrlrg
      661 ggldvigpvl adlvsptwcd rlaralapir dvsrddpagn lpaaarlldl lglatptgqa
      721 vaarwrgrgs tramigigpa gpfavdlald gphgliagtt gagksellqt licslavvnr
      781 pdqltfvlid ykggaafkec vrlphtvgmv sdldghltqr aldslaaelr rrerlfqaag
      841 akdiddytgd plprlvliid efaalvaelp dfvaglvdva rkgrslgihl ilatqrpagv
      901 vtaeiqants lrialrvtep messdvidmp daahiskstp grcyvksgag aatavqtarv
      961 ggrspvlrph aprpllsapv pedddpfaps pqgsdgvppa pppgsdrlpp vpplagdgll
     1021 vtrppgrdgf lpasspegdg lfpassldnn gflpaprpgs dgflppppfg ggaplsapsp
     1081 gddglfpaph fggddsplpg apspandsts rgddgadgvg ragrgggtsp vafdssghag
     1141 gqpaprhsrp rpdghpygsr plpgnaanap qagrrsdgrh hapytrpsyd alpeeapglp
     1201 aadghltprr gtaddaarsm phgaptadgp ardwpphtmp psatrpgsap pdplgawgts
     1261 padqdpgdar rgatpggrda rdtspsgqap dvrdtspgra pdtrgtspgq apdvrgtspe
     1321 qapdvrgtsp ggepdtrdts pgwapgevtp ggwppedmpa mpasdgitdd ptraggassg
     1381 lsgrgshspg drfpgvtplp rtdglsvrgk apgadgmpgh gsapdpgfvg dpgvagrgsg
     1441 vtgrgfgqdr lhealdvlgp adlgrpgect grfemsdggp gsvrvvdvdw rslgrplpap
     1501 peppeestvt dlsiladaiv eatrltgvrr qpspwleplp ahlvldqvha mtgrpraytg
     1561 mggesttrqe rperpgthtg papqsgrsat hrhpaehpds htgaipqidy sgthrhpaah
     1621 pdayigpdpr ssllgshddp aerpdaqhtg wssptgrtgp prgpverpea ytgpvsendp
     1681 tgtrrgpdeg pdahtgwnqq tsamgtygrp aghpdvyagp gprighmgth sdfgssdfme
     1741 vepipfgvid rpwaqdrrpl aldlphgghl liagsartgr stalrtvaga iaaqaspadv
     1801 hvhaidcgsg allplvamph cgavvtrdql drverllgrl raevgrrqql laeaghasla
     1861 eyraaghrlp wlvfmldrwe gyvaafesyd ygrlidavlq llregpavgl ravvtgdrsc
     1921 lmgqvstvfd drlilrladp adyglagfpl kglpssmppg ralsigehgv vesqiallta
     1981 dpsgpaqvga lqdlarsasg hergqgtmva gpggadrgaw lregepplrv dalpmritag
     2041 eaaalapafs rpsplwalvg aggdalaplg idlyaqgpga viagpprsgr ssvlltaahs
     2101 liahgtpvva vaprrsplrd lrgavavldg natdlqella ehkeyvvlvd daelispdgp
     2161 lgmaleevlr sgrdgdhgli iagstgdltq ayrgfvaetr ksrtgvllsv qspadgdlls
     2221 vrlprgavgg ppgrgllvtm gtmtpiqaal peggv
//
LOCUS       WP_235994245             225 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF1254 domain-containing protein [Brucella].
ACCESSION   WP_235994245
VERSION     WP_235994245.1
KEYWORDS    RefSeq.
SOURCE      Brucella
  ORGANISM  Brucella
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018561.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06863.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Brucella"
                     /db_xref="taxon:234"
     Protein         1..225
                     /product="DUF1254 domain-containing protein"
                     /calculated_mol_wt=24592
     Region          7..>220
                     /region_name="COG5361"
                     /note="Uncharacterized conserved protein [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:444136"
ORIGIN      
        1 mkrrtflaga talmvlpslp afaqkdiktv areayiytyp mvkiyltiyq yalesggsqy
       61 kgplntlvsi arvytpedta iitpnsdtpy sfivfdlrad pvvvtmppie knryyslqli
      121 dlytnnvdyp gtrvdgnggg dflitgpdwk gdvpkgikrv iemptalaig ivrtqlfspa
      181 dldkvkeiqa gykaallsay agtvapdapp vvdwmpisdd lmvtn
//
LOCUS       WP_235994568             405 aa            linear   BCT 02-MAR-2025
DEFINITION  SMI1/KNR4 family protein [Nonomuraea montanisoli].
ACCESSION   WP_235994568
VERSION     WP_235994568.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea montanisoli
  ORGANISM  Nonomuraea montanisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
REFERENCE   1  (residues 1 to 405)
  AUTHORS   Zhang,D., Iyer,L.M. and Aravind,L.
  TITLE     A novel immunity system for bacterial nucleic acid degrading toxins
            and its recruitment in various eukaryotic and DNA viral systems
  JOURNAL   Nucleic Acids Res 39 (11), 4532-4552 (2011)
   PUBMED   21306995
REFERENCE   2  (residues 1 to 405)
  AUTHORS   Enderlin,C.S. and Selitrennikoff,C.P.
  TITLE     Cloning and characterization of a Neurospora crassa gene required
            for (1,3) beta-glucan synthase activity and cell wall formation
  JOURNAL   Proc Natl Acad Sci U S A 91 (20), 9500-9504 (1994)
   PUBMED   7937796
REFERENCE   3  (residues 1 to 405)
  AUTHORS   Hong,Z., Mann,P., Brown,N.H., Tran,L.E., Shaw,K.J., Hare,R.S. and
            DiDomenico,B.
  TITLE     Cloning and characterization of KNR4, a yeast gene involved in
            (1,3)-beta-glucan synthesis
  JOURNAL   Mol Cell Biol 14 (2), 1017-1025 (1994)
   PUBMED   8289782
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020904.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09346.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Nonomuraea montanisoli"
                     /db_xref="taxon:2741721"
     Protein         1..405
                     /product="SMI1/KNR4 family protein"
                     /calculated_mol_wt=43821
     Region          <24..212
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          212..379
                     /region_name="SMI1"
                     /note="Cell wall assembly regulator SMI1 (Killer
                     toxin-resistance protein 4) [Cell wall/membrane/envelope
                     biogenesis]; COG4282"
                     /db_xref="CDD:443423"
ORIGIN      
        1 miisrrvwla laasaiavav vlivrsrrrp alpapvrred apvrredapa epaasagppv
       61 drwppapvlg tptdedlary aaagppripa flqgghdrpv repldeatrr rltrwgaaal
      121 alclvagggr lvesavfske pelswgpsqe evcptdpsrs qatclfaelh pgstmsgpee
      181 pvpgpwavpd pdchppsrvf pvlapdpkvt ravdrqwrri erwlrthapr shrtlagpad
      241 paavaavear mgrrlpgdlr asllrhdgav ttkdtwgfgf lgntslsvqe tletwrglcd
      301 vddedyggee sdprsqwwdg rmlpvgadgs gdhlvvdsvr rdvgdtdheg sldftpggvr
      361 irsyhallka vadalekgra igywkpevvg gelewtvlps rkgds
//
LOCUS       WP_235994960             276 aa            linear   BCT 02-MAR-2025
DEFINITION  SAM-dependent methyltransferase [Nonomuraea montanisoli].
ACCESSION   WP_235994960
VERSION     WP_235994960.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea montanisoli
  ORGANISM  Nonomuraea montanisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
REFERENCE   1  (residues 1 to 276)
  AUTHORS   Rutherford,K., Parson,W.W. and Daggett,V.
  TITLE     The histamine N-methyltransferase T105I polymorphism affects active
            site structure and dynamics
  JOURNAL   Biochemistry 47 (3), 893-901 (2008)
   PUBMED   18154359
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016550.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04672.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Nonomuraea montanisoli"
                     /db_xref="taxon:2741721"
     Protein         1..276
                     /product="SAM-dependent methyltransferase"
                     /EC_number="2.1.1.-"
                     /calculated_mol_wt=30330
     Region          5..275
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(79..85,106..107,130..132,158)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
ORIGIN      
        1 mdammeqapv gidphvpnaa rmydyflggk dnfqadrdla dmvlkvmpdi rvgtqenral
       61 igrvvkylcd qgitqfldlg sglparenvh eaalrhvpda rvvyvdndpv vathgralla
      121 apdrvamvqa darrpeevle hpsvralidf erpvallmmf flhlvpdedd pqgfvaryre
      181 alapgsylai shvgtdsape qvrrvsdfyk qanapfcprp gaeiaaffgd felippglat
      241 glgeetgwpf vdpknpplid eeiarmgyag igrrpf
//
LOCUS       WP_235994962             276 aa            linear   BCT 02-MAR-2025
DEFINITION  TetR family transcriptional regulator [Nonomuraea montanisoli].
ACCESSION   WP_235994962
VERSION     WP_235994962.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea montanisoli
  ORGANISM  Nonomuraea montanisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012655.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00440.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Nonomuraea montanisoli"
                     /db_xref="taxon:2741721"
     Protein         1..276
                     /product="TetR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=29184
     Region          9..194
                     /region_name="ScbR_bind_reg"
                     /note="ScbR family autoregulator-binding transcription
                     factor; NF041196"
                     /db_xref="CDD:469100"
     Region          209..269
                     /region_name="Fer"
                     /note="Ferredoxin [Energy production and conversion];
                     COG1141"
                     /db_xref="CDD:440756"
ORIGIN      
        1 mgripgvtaa etrerllraa advfarrgyd gtrvadiaaa agvsngalya hfaskaellv
       61 aalrahgrrl ladllaadpd rsvtdlllvv grwlprrrdp dghlivealv aarrdeevar
      121 pmrdyvgera dwlatlvraa qhggeldpal spdalahfcl llamgsalvt pdlhavgdee
      181 waalltrvvt alappdthpa teestavnvq idsgrcqghg rcytlapglf aeddegygqv
      241 agdgavppge eraarlaasn cperaidldt dldeea
//
LOCUS       WP_235995069            1451 aa            linear   BCT 02-MAR-2025
DEFINITION  ThuA domain-containing protein [Nonomuraea montanisoli].
ACCESSION   WP_235995069
VERSION     WP_235995069.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea montanisoli
  ORGANISM  Nonomuraea montanisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
REFERENCE   1  (residues 1 to 1451)
  AUTHORS   Ampomah,O.Y., Avetisyan,A., Hansen,E., Svenson,J., Huser,T.,
            Jensen,J.B. and Bhuvaneswari,T.V.
  TITLE     The thuEFGKAB operon of rhizobia and agrobacterium tumefaciens
            codes for transport of trehalose, maltitol, and isomers of sucrose
            and their assimilation through the formation of their 3-keto
            derivatives
  JOURNAL   J Bacteriol 195 (17), 3797-3807 (2013)
   PUBMED   23772075
REFERENCE   2  (residues 1 to 1451)
  AUTHORS   Ampomah,O.Y., Jensen,J.B. and Bhuvaneswari,T.V.
  TITLE     Lack of trehalose catabolism in Sinorhizobium species increases
            their nodulation competitiveness on certain host genotypes
  JOURNAL   New Phytol 179 (2), 495-504 (2008)
   PUBMED   19086182
REFERENCE   3  (residues 1 to 1451)
  AUTHORS   Jensen,J.B., Peters,N.K. and Bhuvaneswari,T.V.
  TITLE     Redundancy in periplasmic binding protein-dependent transport
            systems for trehalose, sucrose, and maltose in Sinorhizobium
            meliloti
  JOURNAL   J Bacteriol 184 (11), 2978-2986 (2002)
   PUBMED   12003938
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018038.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06283.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1451
                     /organism="Nonomuraea montanisoli"
                     /db_xref="taxon:2741721"
     Protein         1..1451
                     /product="ThuA domain-containing protein"
                     /calculated_mol_wt=153479
     Region          15..463
                     /region_name="YliI"
                     /note="Glucose/arabinose dehydrogenase, beta-propeller
                     fold [Carbohydrate transport and metabolism]; COG2133"
                     /db_xref="CDD:441736"
     Region          471..552
                     /region_name="PKD_4"
                     /note="PKD domain; pfam18911"
                     /db_xref="CDD:436824"
     Region          659..783
                     /region_name="CBM6_xylanase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); many are
                     appended to glycoside hydrolase (GH) family 11 and GH43
                     xylanase domains; cd04084"
                     /db_xref="CDD:271150"
     Site            order(675,687..688,745,777)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:271150"
     Region          803..910
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cl49609"
                     /db_xref="CDD:483949"
     Site            order(805..807,818,820,827..828)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467329"
     Site            order(847..848,860,862,869..870)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467329"
     Site            order(889..890,897,899,906..907)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467329"
     Region          924..1129
                     /region_name="ThuA"
                     /note="Trehalose utilization; pfam06283"
                     /db_xref="CDD:461867"
     Region          1142..1318
                     /region_name="3keto-disac_hyd"
                     /note="3-keto-disaccharide hydrolase; pfam06439"
                     /db_xref="CDD:399445"
     Region          1327..1448
                     /region_name="CBM6_xylanase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); many are
                     appended to glycoside hydrolase (GH) family 11 and GH43
                     xylanase domains; cd04084"
                     /db_xref="CDD:271150"
     Site            order(1343,1355..1356,1413,1442)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:271150"
ORIGIN      
        1 mttltlpara hdtidpadyq tvtlahgsae tgepmsiavl pdlsvlhtsr dgtlrrtdkt
       61 gntkvtgtlp vyshdeeglq gvaadpgfat nrtiylyyap klstpggdap vtgadwsawq
      121 gvnrlsrftl kedwtldvas ekkvldvpad rgmcchvggd idfdaqgnly lstgddtnpf
      181 dsagyapide rtdrnpayda qrsaantndl rgkilrikvn padgsytaps gnlfppgtak
      241 trpeiyamgf rnpfrmsvdk ktgvvyvgdy gpdaggtnpd rgpsgqvefd kvsqagnfgw
      301 pyctgtntpa etyneytfps gpsgakydca ggptnnsfrn tglaklppaq pawiryggda
      361 gsppefgtgs espmggpayh ydpdlqsevk fpqgldnmvf lgefgrrwik avspadnhim
      421 nfpwsgtqvm dlafgpdgal yvldygtgsf ggdensalyr ieyikgrdrs ptakasadkt
      481 sgqppltvaf ssegsadpdg qalsyawdfg dggtstqanp thtytakgef qakltvkdpa
      541 gnsgtagvpi tvgntaptit fqtpregqlf ewgdkvpfkv tvtdpedgti dcaavkvtyv
      601 lghdshghpi tstngcegtl tipkdgehds aanifavfna sytdkgkltg skelilqprh
      661 rqaehyaaas gvqkvdkqaa eggktvgyie ngdwisfkpy elsaaksarf rissggaggn
      721 ieirtgsqsg pvvgkvavpt tggwetfkdv etaltgvttk tdslflvftg gagslfdvds
      781 ftlsseagtq pvtgpiggpg ggcvdvaggn tadstkvqmy acngtnaqkw tvdgaagtik
      841 algkcldvkw adtadgtkvq iytcngtnaq kwtvdsaagt ikalgkclda adktqlvirt
      901 cdgganqkfs ppgggdavgd gdvlvfsrtt gfrhdsiaag iqaiknmgfk vtatedpgaf
      961 ttanlakyka vtflnttgdv lnadqqaafe syikagggya gvhaaadtey dwpfygelag
     1021 awfsshpatq qatikvedra npatahlgat wtrtdewydy rsnpratahv latvdessys
     1081 ggkmgadhpi swcktyqggr sfytglghtp etfseqaflq hlkggiayam gtaqadcrpe
     1141 tgytalyngs ttgweqagpg sftnadatlt stggmglywy kakeftkgys lkldwkaagd
     1201 dnsgifigfp pstdpwsavg kgyeiqidat daadkttgai ygfksadiaa rdkalnppgq
     1261 wnafeirveg ervqvllngv kindftntdp arslkdghig lqnhsdgdtv sfrdirvkel
     1321 gaptgdsviq aenwsqangv qtyphtpahg gavlgfvnpg dwaaydevdl tgvtsftarv
     1381 asvdptggfe irtdsptgpv lgrvtvpntg gwesyqdvst pltnvpdkpv rlyltfngsn
     1441 ldvddftlrr a
//
LOCUS       WP_235995169             470 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein
            [Nonomuraea montanisoli].
ACCESSION   WP_235995169
VERSION     WP_235995169.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea montanisoli
  ORGANISM  Nonomuraea montanisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
REFERENCE   1  (residues 1 to 470)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Nonomuraea montanisoli"
                     /db_xref="taxon:2741721"
     Protein         1..470
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /calculated_mol_wt=48778
     Region          <78..470
                     /region_name="FtsI"
                     /note="Cell division protein FtsI, peptidoglycan
                     transpeptidase (Penicillin-binding protein 2) [Cell cycle
                     control, cell division, chromosome partitioning, Cell
                     wall/membrane/envelope biogenesis]; COG0768"
                     /db_xref="CDD:440531"
ORIGIN      
        1 mniplrrasl acaallfsll anltylqafg rsdlegdprd qrvllaklgr prgdiitheg
       61 avvatsrrad aepyghlrvy pygemyahvt ghvslrratg verardavls gsdpkvrmra
      121 lvedraygga dvrltirepv qraayealea tgrpgaaval dpatgavlal vsypsydpaa
      181 yapgdpteea atdrrlrgdp rrplldralh rayppgavfe lvttaaalgs geytvasrvg
      241 aparlplpgp pafltaaagr pcgdgrppla yafqlscdta lanlglqlgp dllrdqaeaf
      301 gfnaddlalp lqartgtypg dldqsraals aigrdevras plmlamlsaa vanggllmrp
      361 ylveevrlpd gsttdraepa pyrtamppqp agqlaalmtt ttvpggpaag valpgmevaa
      421 ktttsghgps actafapada pevavgvvle sttpsaaapl arailraalp
//
LOCUS       WP_235995470              65 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein, partial
            [Secundilactobacillus yichangensis].
ACCESSION   WP_235995470
VERSION     WP_235995470.1
KEYWORDS    RefSeq.
SOURCE      Secundilactobacillus yichangensis
  ORGANISM  Secundilactobacillus yichangensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Secundilactobacillus.
REFERENCE   1  (residues 1 to 65)
  AUTHORS   Murai,N., Kamata,H., Nagashima,Y., Yagisawa,H. and Hirata,H.
  TITLE     A novel insertion sequence (IS)-like element of the thermophilic
            bacterium PS3 promotes expression of the alanine carrier
            protein-encoding gene
  JOURNAL   Gene 163 (1), 103-107 (1995)
   PUBMED   7557457
REFERENCE   2  (residues 1 to 65)
  AUTHORS   Donadio,S. and Staver,M.J.
  TITLE     IS1136, an insertion element in the erythromycin gene cluster of
            Saccharopolyspora erythraea
  JOURNAL   Gene 126 (1), 147-151 (1993)
   PUBMED   8386127
REFERENCE   3  (residues 1 to 65)
  AUTHORS   Bancroft,I. and Wolk,C.P.
  TITLE     Characterization of an insertion sequence (IS891) of novel
            structure from the cyanobacterium Anabaena sp. strain M-131
  JOURNAL   J Bacteriol 171 (11), 5949-5954 (1989)
   PUBMED   2553665
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023742.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12323.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Secundilactobacillus yichangensis"
                     /db_xref="taxon:2799580"
     Protein         1..>65
                     /product="helix-turn-helix domain-containing protein"
     Region          1..>58
                     /region_name="InsQ"
                     /note="Transposase [Mobilome: prophages, transposons];
                     COG0675"
                     /db_xref="CDD:440439"
ORIGIN      
        1 mlltykveik ptekqawqid shisgsrway nlfldinqqr yecgyhymga yefskwfnhe
       61 yletn
//
LOCUS       WP_235995501             184 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Secundilactobacillus
            yichangensis].
ACCESSION   WP_235995501
VERSION     WP_235995501.1
KEYWORDS    RefSeq.
SOURCE      Secundilactobacillus yichangensis
  ORGANISM  Secundilactobacillus yichangensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Secundilactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024252.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12844.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Secundilactobacillus yichangensis"
                     /db_xref="taxon:2799580"
     Protein         1..184
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=21443
     Region          <57..128
                     /region_name="CxxCG_CxxCG_HTH"
                     /note="putative zinc finger/helix-turn-helix protein, YgiT
                     family; TIGR03830"
                     /db_xref="CDD:274805"
ORIGIN      
        1 mvtkkkfyne elgttdlyte vwlletvrvk dvddllvenh ywrdsegelw sdfnnpmenv
       61 krsvdayrkr kgymtpheir tlrenlglsv refadelgia sstltqienn rrvqvkyqen
      121 lfrsaerdyr ngtfhkihsp kttsdllnqh latstyaaht pkyetiklsk fdeafkltnf
      181 ggia
//
LOCUS       WP_235995507              64 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein, partial
            [Secundilactobacillus yichangensis].
ACCESSION   WP_235995507
VERSION     WP_235995507.1
KEYWORDS    RefSeq.
SOURCE      Secundilactobacillus yichangensis
  ORGANISM  Secundilactobacillus yichangensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Secundilactobacillus.
REFERENCE   1  (residues 1 to 64)
  AUTHORS   Murai,N., Kamata,H., Nagashima,Y., Yagisawa,H. and Hirata,H.
  TITLE     A novel insertion sequence (IS)-like element of the thermophilic
            bacterium PS3 promotes expression of the alanine carrier
            protein-encoding gene
  JOURNAL   Gene 163 (1), 103-107 (1995)
   PUBMED   7557457
REFERENCE   2  (residues 1 to 64)
  AUTHORS   Donadio,S. and Staver,M.J.
  TITLE     IS1136, an insertion element in the erythromycin gene cluster of
            Saccharopolyspora erythraea
  JOURNAL   Gene 126 (1), 147-151 (1993)
   PUBMED   8386127
REFERENCE   3  (residues 1 to 64)
  AUTHORS   Bancroft,I. and Wolk,C.P.
  TITLE     Characterization of an insertion sequence (IS891) of novel
            structure from the cyanobacterium Anabaena sp. strain M-131
  JOURNAL   J Bacteriol 171 (11), 5949-5954 (1989)
   PUBMED   2553665
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023742.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12323.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..64
                     /organism="Secundilactobacillus yichangensis"
                     /db_xref="taxon:2799580"
     Protein         1..>64
                     /product="helix-turn-helix domain-containing protein"
     Region          11..>62
                     /region_name="InsQ"
                     /note="Transposase [Mobilome: prophages, transposons];
                     COG0675"
                     /db_xref="CDD:440439"
ORIGIN      
        1 miefnkaaql mlltykveik ptekqawqid chiggsrway nlfldinrqr yecgyhymga
       61 yefs
//
LOCUS       WP_235995809             299 aa            linear   BCT 02-MAR-2025
DEFINITION  3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal
            domain-containing protein [Burkholderia aenigmatica].
ACCESSION   WP_235995809
VERSION     WP_235995809.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia aenigmatica
  ORGANISM  Burkholderia aenigmatica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (residues 1 to 299)
  AUTHORS   Abbadi,A., Brummel,M., Schutt,B.S., Slabaugh,M.B., Schuch,R. and
            Spener,F.
  TITLE     Reaction mechanism of recombinant 3-oxoacyl-(acyl-carrier-protein)
            synthase III from Cuphea wrightii embryo, a fatty acid synthase
            type II condensing enzyme
  JOURNAL   Biochem J 345 Pt 1 (Pt 1), 153-160 (2000)
   PUBMED   10600651
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020130.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08541.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Burkholderia aenigmatica"
                     /db_xref="taxon:2015348"
     Protein         1..299
                     /product="3-oxoacyl-[acyl-carrier-protein] synthase III
                     C-terminal domain-containing protein"
                     /calculated_mol_wt=31669
     Region          35..283
                     /region_name="FabH"
                     /note="3-oxoacyl-[acyl-carrier-protein] synthase III
                     [Lipid transport and metabolism]; COG0332"
                     /db_xref="CDD:440101"
ORIGIN      
        1 mqavyadtlr wrdsgapfgv agiplpqasr atdhrvaves dltlsdmala tvrallessp
       61 qvatptpdqi ivcttsfehd lalscacrlh selgssrapl avgqlqgvsf lmaleiavam
      121 maadirlntv vivaaerwrr pfsrrigali dmgdgaaavl iarhpgpgwr vsgltvltpg
      181 ipplaserep vytstltnvi setcsgadlq panvdwvlpa pietrlarei ntrcglrper
      241 vchirmdapg hfcaadtpar ldallrsinp segqhalvws agfqgqagca llefrgggs
//
LOCUS       WP_235995858             486 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-linked oxidase C-terminal domain-containing protein [Nonomuraea
            montanisoli].
ACCESSION   WP_235995858
VERSION     WP_235995858.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea montanisoli
  ORGANISM  Nonomuraea montanisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
REFERENCE   1  (residues 1 to 486)
  AUTHORS   Mattevi,A., Fraaije,M.W., Coda,A. and van Berkel,W.J.
  TITLE     Crystallization and preliminary X-ray analysis of the flavoenzyme
            vanillyl-alcohol oxidase from Penicillium simplicissimum
  JOURNAL   Proteins 27 (4), 601-603 (1997)
   PUBMED   9141139
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02913.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Nonomuraea montanisoli"
                     /db_xref="taxon:2741721"
     Protein         1..486
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=50685
     Region          3..466
                     /region_name="PRK11230"
                     /note="glycolate oxidase subunit GlcD; Provisional"
                     /db_xref="CDD:183043"
ORIGIN      
        1 mtpspspaia pltaalrsal pgdsvitdpv rlrtyecdgl thhravpgvv alpetaeqva
       61 lvvrlcnehg vpfvargsgt glsggalpre dgvlivtskm rrileidlpd rravvepgvt
      121 nlaiteavre rghyyapdps sqqvcsiggn vaensggahc lkygftvnhv eaceivtpdg
      181 dlvrldrmdp gydllgafvg segtlgiatk vtvrlsrape avmtvlaafr sieeggravs
      241 aiigagivpa aiemmdalai eaaeaavacs ypagagavli veldgpaaev eaqfarlrel
      301 csgafemrva adaaeraavw kgrrsafaav grispayivq dgvvprtslp rvlaaidrls
      361 aehgirvanv fhagdgnlhp lvlfddaepg ageraevvsg aildlcvehg gsitgehgvg
      421 vdkarympkm ftgddldtmq lvrcafdprg lsnpgkvfpt prlcgevpgv rkgvhplves
      481 geaeqf
//
LOCUS       WP_235995901             245 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: AAA family ATPase [Burkholderia].
ACCESSION   WP_235995901
VERSION     WP_235995901.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025052.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13671.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         1..245
                     /product="AAA family ATPase"
                     /calculated_mol_wt=27367
     Region          121..227
                     /region_name="COG4639"
                     /note="Predicted kinase [General function prediction
                     only]"
                     /db_xref="CDD:443677"
ORIGIN      
        1 mltfasvgek rdrrrrrigk tigvrteyls asgrterpfg sdicrrasde ptvgqersfd
       61 rsvyfvencr lrtdiekghl mhlnpdhylq tdagrvftie rnaaaweqly adlsaalltd
      121 rrrivmvigv qgagkstwtq nqvstsndai yvdstfatan rrsnviaiak aagvpisavw
      181 lkveletalr rnrnrpvdei vpdaavenvf kifeppslse gfrevvilgd afdsiqqisd
      241 hrpgc
//
LOCUS       WP_235995943             261 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerophosphodiester phosphodiesterase family protein [Nonomuraea
            montanisoli].
ACCESSION   WP_235995943
VERSION     WP_235995943.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea montanisoli
  ORGANISM  Nonomuraea montanisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
REFERENCE   1  (residues 1 to 261)
  AUTHORS   Kim,H. and Farrand,S.K.
  TITLE     Characterization of the acc operon from the nopaline-type Ti
            plasmid pTiC58, which encodes utilization of agrocinopines A and B
            and susceptibility to agrocin 84
  JOURNAL   J Bacteriol 179 (23), 7559-7572 (1997)
   PUBMED   9393724
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03009.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Nonomuraea montanisoli"
                     /db_xref="taxon:2741721"
     Protein         1..261
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /GO_function="GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=28413
     Region          26..257
                     /region_name="UgpQ"
                     /note="Glycerophosphoryl diester phosphodiesterase [Lipid
                     transport and metabolism]; COG0584"
                     /db_xref="CDD:440349"
ORIGIN      
        1 mavplaalml aslltspsls alpacpqifg hggyptgpna werdqvrqpn nptairryka
       61 wgasgveadl qltkdgtkav mwhntstwgl tgtkknitdi wwaagdtalq grtinrglfp
      121 getvytfraw ltamksagmv glveikpear qsllssdati ksrawaevlg pvkesyrsqe
      181 iilyshdgai taelrrqvsa aglsqvlsgg pvwpevtdwe epppswrlne nawqtalqsg
      241 akrvatdytp qlktwlqgkc q
//
LOCUS       WP_235996028             142 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6463 family protein [Nonomuraea montanisoli].
ACCESSION   WP_235996028
VERSION     WP_235996028.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea montanisoli
  ORGANISM  Nonomuraea montanisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039463.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20064.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Nonomuraea montanisoli"
                     /db_xref="taxon:2741721"
     Protein         1..142
                     /product="DUF6463 family protein"
                     /calculated_mol_wt=14249
     Region          18..131
                     /region_name="DUF6463"
                     /note="Family of unknown function (DUF6463); pfam20064"
                     /db_xref="CDD:437896"
ORIGIN      
        1 msttpaakpp atsappsrlt iwagrsmvli avahtvlfsl iapwsswlag dlrtgaadsd
       61 smatfwalpg gfvvvlallg llvaragrqg hhvpgyvgwa ilawgafavs ligpsgflsa
      121 ivpaglliaa nvvagrhsag ss
//
LOCUS       WP_235996146             608 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: phage tail tip lysozyme [Burkholderia].
ACCESSION   WP_235996146
VERSION     WP_235996146.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
REFERENCE   1  (residues 1 to 608)
  AUTHORS   Xiang,Y., Morais,M.C., Cohen,D.N., Bowman,V.D., Anderson,D.L. and
            Rossmann,M.G.
  TITLE     Crystal and cryoEM structural studies of a cell wall degrading
            enzyme in the bacteriophage phi29 tail
  JOURNAL   Proc Natl Acad Sci U S A 105 (28), 9552-9557 (2008)
   PUBMED   18606992
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037025.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18013.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         1..608
                     /product="phage tail tip lysozyme"
                     /calculated_mol_wt=64699
     Region          401..532
                     /region_name="Phage_lysozyme2"
                     /note="Phage tail lysozyme; pfam18013"
                     /db_xref="CDD:465617"
ORIGIN      
        1 mtivdalvvt lgldvsaykr gkaeastatk kltteekaaa keieernkka adsfkrvrne
       61 vlalvaifta gagikqften tingavnlgy maqnlkmstr dlaawqraae raggsaegit
      121 nalqasqgdv aklkfgqvte gvqwflrmgg svkdlrdgnt yllarariis nmfkvdpgra
      181 rfvaqqmgig dgefnflkqg egavlalvda qkknsaiter qaaqalklkn ewldlrdrlt
      241 yvgttillel mptfeqwigq lqrmadwvad hkgdisewir gaatdirsiv kianfaadam
      301 ggwknvimal iglkvvsils pllrlgaala gvggglgavs aagpaalsvl grvigaaall
      361 fhseglnqge gdtritqpgd twdgdpvgka raaansgsla drqryiagrm keagysdaai
      421 agtigslmqe skldptavnk tsgnagiaqw gkgraaqfek qfghplsqst fgeqvdfmlw
      481 elkntekqad qrlrmaktpe laaevhsrey erpgtaeani arrqqyarem faglgqanaa
      541 liaqqtaaaa tpastnnvst stssnetnfn gpitiqtqat daagvardfa pamrrygfti
      601 aqantgls
//
LOCUS       WP_235995938             104 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: type VI secretion system baseplate subunit TssF
            [Burkholderia].
ACCESSION   WP_235995938
VERSION     WP_235995938.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
REFERENCE   1  (residues 1 to 104)
  AUTHORS   Coyne,M.J., Roelofs,K.G. and Comstock,L.E.
  TITLE     Type VI secretion systems of human gut Bacteroidales segregate into
            three genetic architectures, two of which are contained on mobile
            genetic elements
  JOURNAL   BMC Genomics 17, 58 (2016)
   PUBMED   26768901
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 104)
  AUTHORS   Brunet,Y.R., Zoued,A., Boyer,F., Douzi,B. and Cascales,E.
  TITLE     The Type VI Secretion TssEFGK-VgrG Phage-Like Baseplate Is
            Recruited to the TssJLM Membrane Complex via Multiple Contacts and
            Serves As Assembly Platform for Tail Tube/Sheath Polymerization
  JOURNAL   PLoS Genet 11 (10), e1005545 (2015)
   PUBMED   26460929
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 104)
  AUTHORS   English,G., Byron,O., Cianfanelli,F.R., Prescott,A.R. and
            Coulthurst,S.J.
  TITLE     Biochemical analysis of TssK, a core component of the bacterial
            Type VI secretion system, reveals distinct oligomeric states of
            TssK and identifies a TssK-TssFG subcomplex
  JOURNAL   Biochem J 461 (2), 291-304 (2014)
   PUBMED   24779861
REFERENCE   4  (residues 1 to 104)
  AUTHORS   Zhou,Y., Tao,J., Yu,H., Ni,J., Zeng,L., Teng,Q., Kim,K.S.,
            Zhao,G.P., Guo,X. and Yao,Y.
  TITLE     Hcp family proteins secreted via the type VI secretion system
            coordinately regulate Escherichia coli K1 interaction with human
            brain microvascular endothelial cells
  JOURNAL   Infect Immun 80 (3), 1243-1251 (2012)
   PUBMED   22184413
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017733.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05947.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         1..104
                     /product="type VI secretion system baseplate subunit TssF"
                     /calculated_mol_wt=11295
     Region          <21..100
                     /region_name="T6SS_TssF"
                     /note="Type VI secretion system, TssF; cl15462"
                     /db_xref="CDD:472810"
ORIGIN      
        1 mvvdqcnyrq dhshfpagce qdrldgltnp shrvkqlwls gepmpsfvrg levtltvdeq
       61 afaaaslstf napatsfvql vvtsanngre irrcaprpgt iplt
//
LOCUS       WP_235996206             438 aa            linear   BCT 02-MAR-2025
DEFINITION  YHS domain-containing protein, partial [Burkholderia aenigmatica].
ACCESSION   WP_235996206
VERSION     WP_235996206.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia aenigmatica
  ORGANISM  Burkholderia aenigmatica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016811.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04945.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Burkholderia aenigmatica"
                     /db_xref="taxon:2015348"
     Protein         <1..438
                     /product="YHS domain-containing protein"
     Region          27..412
                     /region_name="Ferritin_like"
                     /note="Ferritin-like superfamily of diiron-containing
                     four-helix-bundle proteins; cl00264"
                     /db_xref="CDD:469698"
     Site            order(29,59,62,120,154,157)
                     /site_type="other"
                     /note="dinuclear metal binding motif [ion binding]"
                     /db_xref="CDD:153097"
ORIGIN      
        1 pppstklefr kdssfyrgdn yfaaggpley mahrgfahvg rhftgegarv acqmqsidel
       61 rhfqtemhal shynkyfngl hnsihwydrv wylsvpksff edaatggpfe fltavsfsfe
      121 yvltnllfvp fmsgaayngd mstvtfgfsa qsdesrhmtl giecikfmle qdpdnvpivq
      181 rwidkwfwrg yrllsivamm qdymlpnrvm swreswemyv eqnggalfkd larygirkpk
      241 gwdqacegkd hishqtfavf ynynaaapih twvpteeemg wlsekypetf dkyyrprwdy
      301 wreqaakgnr fynktlpmlc ttcqipmift epgdatkicy resdylgdky hfcsdhckei
      361 fdnepekfvq swlppqqvyq gncfkpdadp tkegfdplma lldyynlnvg rdnfdfegse
      421 dqknfaawrg evlqgeak
//
LOCUS       WP_235996276             404 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: type IV secretion system protein [Burkholderia].
ACCESSION   WP_235996276
VERSION     WP_235996276.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
REFERENCE   1  (residues 1 to 404)
  AUTHORS   Li,P.L., Hwang,I., Miyagi,H., True,H. and Farrand,S.K.
  TITLE     Essential components of the Ti plasmid trb system, a type IV
            macromolecular transporter
  JOURNAL   J Bacteriol 181 (16), 5033-5041 (1999)
   PUBMED   10438776
REFERENCE   2  (residues 1 to 404)
  AUTHORS   Liang,Y., Aoyama,T. and Oka,A.
  TITLE     Structural characterization of the virB operon on the
            hairy-root-inducing plasmid A4
  JOURNAL   DNA Res 5 (2), 87-93 (1998)
   PUBMED   9679196
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04610.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         1..404
                     /product="type IV secretion system protein"
                     /GO_process="GO:0030255 - protein secretion by the type IV
                     secretion system [Evidence IEA]"
                     /calculated_mol_wt=41394
     Region          35..340
                     /region_name="VirB6"
                     /note="Type IV secretory pathway, VirB6 component
                     [Intracellular trafficking, secretion, and vesicular
                     transport]; COG3704"
                     /db_xref="CDD:442918"
ORIGIN      
        1 mlfsistfaq ssgssgisis aadsgfvsqv tndlnqlest iqsnfsnmsg tlaadgaele
       61 wvlfsvmfvw taitgmlkge slgevfaqii iqilmlgivm aclnsssqna ltqtfsqisn
      121 qfgagtnlsg gfksfftais slwasadgss tssgssgsnw fsslfhtigd fdlgsilagl
      181 aivilklatt vivagaaalw agnyilsqmk vyiglavapv mvpwllmpyt tflfdgwlky
      241 migagmmqiv gaimikmtnt lmttmttvaq gatatnvily vvlvvlalvi aymmseingi
      301 amgllqggsr vgmgfsawss vknwgphrgl gsaaqrsgql agkgaraagq glksagqaal
      361 nrirggggga rggggssgsr ntmasgggvr atmaqarggs tskr
//
LOCUS       WP_235996297             248 aa            linear   BCT 02-MAR-2025
DEFINITION  GIN domain-containing protein [Burkholderia aenigmatica].
ACCESSION   WP_235996297
VERSION     WP_235996297.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia aenigmatica
  ORGANISM  Burkholderia aenigmatica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (residues 1 to 248)
  AUTHORS   Szczesny,P., Linke,D., Ursinus,A., Bar,K., Schwarz,H., Riess,T.M.,
            Kempf,V.A., Lupas,A.N., Martin,J. and Zeth,K.
  TITLE     Structure of the head of the Bartonella adhesin BadA
  JOURNAL   PLoS Pathog 4 (8), e1000119 (2008)
   PUBMED   18688279
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 248)
  AUTHORS   Nummelin,H., Merckel,M.C., Leo,J.C., Lankinen,H., Skurnik,M. and
            Goldman,A.
  TITLE     The Yersinia adhesin YadA collagen-binding domain structure is a
            novel left-handed parallel beta-roll
  JOURNAL   EMBO J 23 (4), 701-711 (2004)
   PUBMED   14765110
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022441.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10988.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Burkholderia aenigmatica"
                     /db_xref="taxon:2015348"
     Protein         1..248
                     /product="GIN domain-containing protein"
                     /calculated_mol_wt=25850
     Region          30..232
                     /region_name="DUF2807"
                     /note="Putative auto-transporter adhesin, head GIN domain;
                     pfam10988"
                     /db_xref="CDD:431583"
ORIGIN      
        1 msifdsaesa wnhvdesyvq eerplqairk ivikgsvdvv frrfdkptlv vagetadava
       61 svktsisggk lvieregvsi sfghrsvrvm gtvgqivhgd lnvpinidmr gkgvsvsgvt
      121 naainrgkvv vgvalpeapv ikikgsgdmt lldlqqsdle leiegsgdia ahghvtnldv
      181 siagsgdvda ssliaerasl siagsgdiea fvrsdvrarv agsgdivirg npplrnhqva
      241 gsgkikfr
//
LOCUS       WP_235996299             445 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Burkholderia aenigmatica].
ACCESSION   WP_235996299
VERSION     WP_235996299.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia aenigmatica
  ORGANISM  Burkholderia aenigmatica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
REFERENCE   1  (residues 1 to 445)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 445)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 445)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 445)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Burkholderia aenigmatica"
                     /db_xref="taxon:2015348"
     Protein         1..>445
                     /product="ATP-binding protein"
     Region          8..406
                     /region_name="ActS_PrrB_HisK"
                     /note="ActS/PrrB/RegB family redox-sensitive histidine
                     kinase; NF033792"
                     /db_xref="CDD:468186"
ORIGIN      
        1 mqritttgrv nlshlfwlrn laiigqlvti gvvqtyfgvh lplpamlmvi aleivfnglt
       61 wvrvlrarpe tnfellgqlw vdlgalsall flsggttnpf vslylpslai aaavlpwhlm
      121 iwlaafavac yaalgfdsvp lnmdnpanlf dyyrtgmwan fmvsvgliaw fvarmsnalr
      181 qrdaalgeaq qhllrderav algvqaatva hemgtplsti amlaeelrda arddpglary
      241 eadlkvleeq mslctsalar lrsrasapas rqpvddwldt fvehwrlrhp hvqfellgar
      301 pagvalddtv aagqiltill dnaaraspqr vtlaakvaha gtadeiefev cddgpgipaa
      361 lreslgampv dstqgghgvg lylafsaaar lggeielsdv vprtaggngr agsaanghaa
      421 agsgqragqr laerttgtpg pagtt
//
LOCUS       WP_235996316             472 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6765 family protein [Burkholderia aenigmatica].
ACCESSION   WP_235996316
VERSION     WP_235996316.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia aenigmatica
  ORGANISM  Burkholderia aenigmatica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042598.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20551.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Burkholderia aenigmatica"
                     /db_xref="taxon:2015348"
     Protein         1..472
                     /product="DUF6765 family protein"
                     /calculated_mol_wt=50531
ORIGIN      
        1 mthsrqvarg ssreavatgr agargrarrn pgvaalalla alampltcsg feadvhfglt
       61 fwlatqagfa sgeadaiala dqrmdagsie ymtsllqfac lsrfapdaqd tqaahypset
      121 rvpaasaari vvpdgpasrs svdatlrrae grnaafmlge fgrslhalqd awahqgtpsv
      181 pdwrrygiec aaglamaapl erggpsghaa emtwrwpvdt eamakstylq mtrypkingv
      241 srnarsweqv rpmlagfida rtkhaksgwf vsnglkdtsf ldgtslpdgp awqavrwhgr
      301 rdvpkpvapt eqpgvdkglv dfyarffsdw vttspvdkrw lpalatghag kpdgplveql
      361 tgwrlrdhgt ylaigtpsqp tgsigasvrn rasfavfksl ndavlplive gdkpspilpf
      421 lvfplpdsad gnkravalik lldapydtig vvseqrsgag wkvtglisss dy
//
LOCUS       WP_235996323             719 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF4357 domain-containing protein [Burkholderia].
ACCESSION   WP_235996323
VERSION     WP_235996323.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025625.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14267.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         1..719
                     /product="DUF4357 domain-containing protein"
                     /calculated_mol_wt=80867
     Region          16..>410
                     /region_name="GmrSD"
                     /note="DNAse/DNA nickase specific for phosphorothioated or
                     glycosylated phage DNA, GmrSD/DndB/SspE family, contains
                     DUF262 and HNH nuclease domains [Defense mechanisms];
                     COG1479"
                     /db_xref="CDD:441088"
     Region          <468..566
                     /region_name="DUF1524"
                     /note="Protein of unknown function (DUF1524); pfam07510"
                     /db_xref="CDD:462188"
     Region          642..696
                     /region_name="DUF4357"
                     /note="Domain of unknown function (DUF4357); pfam14267"
                     /db_xref="CDD:433823"
ORIGIN      
        1 mtlqidcrgf hvphtltake qtlqkifsde yvftipgyqr pyswgndqaq ellddllsal
       61 evspeqlgdc vpyflgsivl iksetspdat vvdgqqrltt ltlllsaira tigdravqag
      121 itkriyehgd vvsateasyr lslrerdrdf frqyiqhedg laklielnst lptsaqerlr
      181 snakvfmsgl sklqevelkr lvqfiitrcy lvtvatpdld sayrifgvln srgldlsatd
      241 ilkaeiiggi epilremytk kwedaeedlg rdefgdlfsh irmvyrkakp qgtllkefke
      301 hvtqtaesqt lvdsvllpma rafaaltdad yastmhaelv nehlrwlnkl efkdwlppal
      361 afyvrhsehp dlmltffrdl erlaylmlar kigvngrier fsaltgaien gqnlfaeasp
      421 lqlspseqfd aysvlngply dthsaraval lllrldrlls dgtavyehev vsvehvmpqq
      481 papngqwatw vpdakiyqnw vhrlgnlvll srkknssasn refswkknsy ftkggvsgfa
      541 lttqvlqhse wtvdimqaqq asmmqvfeth wrleerksks eiakellgel ssdgdgiyfe
      601 lesakhglaa varkssstft ilaqsqarld wtgqphsyqq lreslrtfgs lelsadgshl
      661 vftqdvnfvs psaasatilg rtdngrnswr lkgttityaa wqdnlpvdks pseteaddq
//
LOCUS       WP_235996376             445 aa            linear   BCT 02-MAR-2025
DEFINITION  aspartyl protease family protein [Robertkochia sediminum].
ACCESSION   WP_235996376
VERSION     WP_235996376.1
KEYWORDS    RefSeq.
SOURCE      Robertkochia sediminum
  ORGANISM  Robertkochia sediminum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Robertkochia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025034.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13650.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Robertkochia sediminum"
                     /db_xref="taxon:2785326"
     Protein         1..445
                     /product="aspartyl protease family protein"
                     /calculated_mol_wt=50087
     Region          46..144
                     /region_name="Asp_protease_2"
                     /note="Aspartyl protease; pfam13650"
                     /db_xref="CDD:433378"
     Site            order(60,62,64,87..89,139)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133150"
     Site            60..62
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133150"
     Site            60
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133150"
     Site            order(87..90,96..99)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133150"
     Region          <127..>185
                     /region_name="FrhB_FdhB_C"
                     /note="Coenzyme F420 hydrogenase/dehydrogenase, beta
                     subunit C terminus; cl46973"
                     /db_xref="CDD:481313"
     Region          189..270
                     /region_name="Asp_protease_2"
                     /note="Aspartyl protease; pfam13650"
                     /db_xref="CDD:433378"
     Site            order(208,210,212,237..239)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133150"
     Site            208..210
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133150"
     Site            208
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133150"
     Site            order(237..240,244..247)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133150"
     Region          <372..>444
                     /region_name="RseP"
                     /note="Membrane-associated protease RseP, regulator of
                     RpoE activity [Posttranslational modification, protein
                     turnover, chaperones, Transcription]; COG0750"
                     /db_xref="CDD:440513"
ORIGIN      
        1 mrsiqviwif falafsslqa qqgyhlkage sretirfqfi nnliivpvev ngvalsfild
       61 tgvstpimfn vtgeeglelr naetimvkgl gegepikavr stgntfrlkn lmnsrqelym
      121 lldsdinfsp qlgipihgii gydllknfiv evkynrkvlr fhdpeeyryk nckncetyrl
      181 diignkpfvk aevgfgeegn tpvyllvdsg ssdalwlfen sdrgievpek hfddymgrgl
      241 sgevygkrsr idrfqignfe fedakvafpd stsvqhitfs ggrsgslgse ilkrfnlvid
      301 ypyeritltk nsnfkdpfhy nmsgielehn gmrmvaettm snlgtvfkdr sgtndggvvf
      361 smskalslql kpalqiaalr eespakevgl regdvllsvn gkethnfniq evkemlnkkp
      421 gktvrlevdr ngerltfaft lrevl
//
LOCUS       WP_235996493             254 aa            linear   BCT 02-MAR-2025
DEFINITION  5'-nucleotidase C-terminal domain-containing protein [Robertkochia
            sediminum].
ACCESSION   WP_235996493
VERSION     WP_235996493.1
KEYWORDS    RefSeq.
SOURCE      Robertkochia sediminum
  ORGANISM  Robertkochia sediminum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Robertkochia.
REFERENCE   1  (residues 1 to 254)
  AUTHORS   Knofel,T. and Strater,N.
  TITLE     X-ray structure of the Escherichia coli periplasmic 5'-nucleotidase
            containing a dimetal catalytic site
  JOURNAL   Nat Struct Biol 6 (5), 448-453 (1999)
   PUBMED   10331872
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014871.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02872.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Robertkochia sediminum"
                     /db_xref="taxon:2785326"
     Protein         1..254
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /GO_process="GO:0009166 - nucleotide catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=28871
     Region          <21..238
                     /region_name="UshA"
                     /note="2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or
                     3'-nucleotidase, 5'-nucleotidase family [Nucleotide
                     transport and metabolism, Defense mechanisms]; COG0737"
                     /db_xref="CDD:440500"
ORIGIN      
        1 mriflkhfvv fitlvgvvsc kqenkhlekv sweeievtev lekpdsleqf vapyrkhlds
       61 vlaeplcyap ttlsksdgqy ntaignllcd iiyeqgapif esrtgkkidm vlinhggira
      121 visqgpvtrr tayevmpfen tinvleisse klnemvdylv rsnrphpfsg ltisinenge
      181 lleykvngrd pkkgdtyfva tsnylanmgd nmkffgnpiq ryeldylirn amidyfektd
      241 tlraatdkrf aiin
//
LOCUS       WP_235996528            1086 aa            linear   BCT 02-MAR-2025
DEFINITION  carbohydrate-binding protein [Robertkochia sediminum].
ACCESSION   WP_235996528
VERSION     WP_235996528.1
KEYWORDS    RefSeq.
SOURCE      Robertkochia sediminum
  ORGANISM  Robertkochia sediminum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Robertkochia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015387.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03422.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1086
                     /organism="Robertkochia sediminum"
                     /db_xref="taxon:2785326"
     Protein         1..1086
                     /product="carbohydrate-binding protein"
                     /GO_function="GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /calculated_mol_wt=120802
     Region          92..336
                     /region_name="BglC"
                     /note="Aryl-phospho-beta-D-glucosidase BglC, GH1 family
                     [Carbohydrate transport and metabolism]; COG2730"
                     /db_xref="CDD:442036"
     Region          413..571
                     /region_name="CBM6_cellulase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); appended to
                     glycoside hydrolase (GH) domains, including GH5
                     (cellulase); cd04080"
                     /db_xref="CDD:271146"
     Site            order(430,482,484,486,515..516,556)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:271146"
     Site            order(463,473..479,531..538,564)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:271146"
     Region          688..812
                     /region_name="CBM6_cellulase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); appended to
                     glycoside hydrolase (GH) domains, including GH5
                     (cellulase); cd04080"
                     /db_xref="CDD:271146"
     Site            order(706,714..720,775..782,806)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:271146"
     Site            order(723,725,727,755..756,799)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:271146"
     Region          1010..1084
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     pfam18962"
                     /db_xref="CDD:436869"
ORIGIN      
        1 mkrimiiigf fltmgvtwgq nlkaqgkviv naqgdevllr gvgpggwqim egymmqtsgv
       61 agsqheirek lidlmgeakt etffekwran hftqrdvdsl aawgfnsiri pmhynlftlp
      121 ieeepvpgen twietgfeli dnvlawaaph dmyiildmha tpggqgrgse indydpskps
      181 lwesqenrdk lvalwgriae rykdhpwigg ydlinethwe lpgntalrei ygritdaira
      241 vdtehiifie gnsyandhsg ltppwddnlv ysfhkywntn kpgdldwilp lreqynvplw
      301 mgesgensnt wftdavtlfe nnnigwawwt mrkigdidsp yavdvnpgyq kvidywkgeg
      361 prptedetya ammqlaenll vdnsryrrdv pdalirqvat ddtkpfegtp asipgiiyaa
      421 nfdlgkngya yfdtdvadyn lstgqfeawn kgwsyrndgv dieknednvn sngfhvgyvd
      481 kgewlkytvn iaatgvyrat vrvatqesgg afflsldgqe itanqkvttt ggwtsfvdie
      541 iqgiqleegv hdlklhfann tpvnlssiyf easgntgaip vkilngqtgd dhrsialtmn
      601 esllpasleg saehfqvmvn dnevvvntvi pvegndrrfa lilddyvlsg dkvtvsysgt
      661 mitsdsgdpl evfedleind llkeifvlpg klemedydyi egmgteestd egegrnlnyt
      721 dagdfadyti fapgagnygl qfrfagfdqg rvglylvgdl geetelvvvn tpvtngwqtw
      781 etvtatmfle kgihkmrmrv laggfnfnwi afgppdsdgd gvldevdrcp dtpenaavdv
      841 hgcevfslpa nnyalsvfse tcraennggi qistqleypy tatlsgegeq hrmtftteae
      901 fsglsagtyr mcitiegnad yeqcftvvva epddlgvttg akaqepnkiv valkgaktyy
      961 vtlneqtitt grseltldls pgvntlevrt dvvcqgtyke tliyaekpmv fpnpvtsdai
     1021 qvysalflks tattalynit gkllrsekhv pgsdqlridm sglpqgvyll nvgledemfn
     1081 ykiikk
//
LOCUS       WP_235996583             207 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2306 domain-containing protein [Pseudoxanthomonas
            beigongshangi].
ACCESSION   WP_235996583
VERSION     WP_235996583.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas beigongshangi
  ORGANISM  Pseudoxanthomonas beigongshangi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021576.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10067.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Pseudoxanthomonas beigongshangi"
                     /db_xref="taxon:2782537"
     Protein         1..207
                     /product="DUF2306 domain-containing protein"
                     /calculated_mol_wt=22805
     Region          35..176
                     /region_name="DUF2306"
                     /note="Predicted membrane protein (DUF2306); cl02232"
                     /db_xref="CDD:470499"
ORIGIN      
        1 mvslaafefl siayqkytql nagsygmfwt rrewlwthig ggaltvllga lqflpqlrrt
       61 wprvhrwigr tfllgmlvac vgavglilts papaairtaf gatalawlvt aflgyrairr
      121 gqvdvhrrwm igcylvtlap itfralvrip gmmelaspmv miptllwlsw aapllvygag
      181 vslmrgmqap rgfpgrtlrs spevesa
//
LOCUS       WP_235996615            1233 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein [Pseudoxanthomonas
            beigongshangi].
ACCESSION   WP_235996615
VERSION     WP_235996615.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas beigongshangi
  ORGANISM  Pseudoxanthomonas beigongshangi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
REFERENCE   1  (residues 1 to 1233)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1233
                     /organism="Pseudoxanthomonas beigongshangi"
                     /db_xref="taxon:2782537"
     Protein         1..1233
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=134502
     Region          12..1203
                     /region_name="recB"
                     /note="exonuclease V subunit beta; Provisional; cl40735"
                     /db_xref="CDD:477421"
ORIGIN      
        1 msatmpaada yltraldgvq lieasagtgk tytlatlftr liveqrlrmg qvlavtytea
       61 atqelrkrir erlslaaglv gtlagnddsh eaaltrgilq rqlergeetp dqlsrrlria
      121 aeetdlaaif tihgfcarvl rehaletgqg fdafellgna rdlyaevaad lwrahaadpa
      181 dadalvglwn gpdalagdlp alcgplplyp qvppdadpra qaetqavraa raanliqait
      241 nhqadaraai aaafdnkvfd grrakrpsfd kafeelqagt rlgdwprtdk thvqkllpda
      301 lagfckegqg agapasplfd alrdwceada awqrvqllqr tallhrlrae arqrldalrr
      361 lrrvrtyddl iegvaealeg phrqalvarl raqyrvalvd efqdtderqw rifarvfgds
      421 devraigdvp alfligdpkq aiygfrggdv atyllargea deaprldhnf rsrpgvlrav
      481 qalydgarea gqdaflhpgi qfepvhaggk rgdadylrdg epapaltlrl lrqadgqplg
      541 adgsrdaata acvaeihrvl ndaregrall dgrpvrpgdi avlvrnhrda trmqqalara
      601 gvpavaagkq slfetteade lrtlllallq padsgrlrta lstvllgeda haiaaleteg
      661 daqrhhqarl lhwrerwqrs gpfalvsdlc aeqaerllgl idgerrmtny lqlgeqlqea
      721 aahtlglhgl ldwlqarian adpddetqll rlesdalrvq ivtlhkskgl eyplvylpft
      781 gigtrrpdsg ryrvlheggr rvlrwridke dpawkaagda asgdgqaeda rllyvgltra
      841 ehalwiaagd itdfarsrla pllagaeslr ghadvriveg paepppprlp aehdagvapa
      901 riarrriaad wwvysftqla haesgadpla aatqadpgge detrvadvde agaetaasvf
      961 tadprfagsh fgvvmhaale dadfaawrdw rpgddapagq driiadalra ggyaeadvad
     1021 glavlvplig htlgtvmpeg grladlppnm rraeiefhfa mtstpvtall allhehgvlr
     1081 qrhafglrqr leglmtglid ltycrdgrwy vldyksnqlp gydtasmqqa mahseydlqa
     1141 liytlalhrw lrfrlgeayd yvrdfggvry lfcrgmdltr dpspgvhaqr fapelvhald
     1201 alfagsvpss rdlppppqag egrgggnrag dra
//
LOCUS       WP_235996698              70 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4260 family protein [Pseudoxanthomonas beigongshangi].
ACCESSION   WP_235996698
VERSION     WP_235996698.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas beigongshangi
  ORGANISM  Pseudoxanthomonas beigongshangi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025445.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14079.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Pseudoxanthomonas beigongshangi"
                     /db_xref="taxon:2782537"
     Protein         1..70
                     /product="DUF4260 family protein"
                     /calculated_mol_wt=7065
     Region          <23..54
                     /region_name="DUF4260"
                     /note="Domain of unknown function (DUF4260); pfam14079"
                     /db_xref="CDD:433700"
ORIGIN      
        1 magahrqdsg ggglnpgeap egialiwlah vgfdralgyg lkyesgfaht hlgligrard
       61 rgaaeprgas
//
LOCUS       WP_235996692             259 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerophosphodiester phosphodiesterase family protein
            [Aestuariimicrobium ganziense].
ACCESSION   WP_235996692
VERSION     WP_235996692.1
KEYWORDS    RefSeq.
SOURCE      Aestuariimicrobium ganziense
  ORGANISM  Aestuariimicrobium ganziense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Propionibacteriaceae; Aestuariimicrobium.
REFERENCE   1  (residues 1 to 259)
  AUTHORS   Kim,H. and Farrand,S.K.
  TITLE     Characterization of the acc operon from the nopaline-type Ti
            plasmid pTiC58, which encodes utilization of agrocinopines A and B
            and susceptibility to agrocin 84
  JOURNAL   J Bacteriol 179 (23), 7559-7572 (1997)
   PUBMED   9393724
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03009.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Aestuariimicrobium ganziense"
                     /db_xref="taxon:2773677"
     Protein         1..259
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /GO_function="GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=28807
     Region          15..251
                     /region_name="PI-PLCc_GDPD_SF"
                     /note="Catalytic domain of phosphoinositide-specific
                     phospholipase C-like phosphodiesterases superfamily;
                     cl14615"
                     /db_xref="CDD:472694"
     Site            order(18,49,51,114,142,220)
                     /site_type="active"
                     /db_xref="CDD:176504"
     Site            order(18,64)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176504"
ORIGIN      
        1 mrqlaegyfd rqfiamahrg gpllaenvgk entlrafena wrlgyrhmet dvhltkdgql
       61 vafhdaeler vtgrpggige hsyaqlrdis vggepiplms elfealpgar fnidikmdga
      121 eeplahlvnw hqarhrvcva sfssrrirrf rrymgarvat tvgpvgtsmt vgrvaagpla
      181 ppglvyqvpe hhtvagrpvr ivspafidrv hrlgkfvhvw tvnqradmer lidwgvdgli
      241 vdsidvlkdv lvgrglwdt
//
LOCUS       WP_235996799             203 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1294 domain-containing protein [Pseudoxanthomonas
            beigongshangi].
ACCESSION   WP_235996799
VERSION     WP_235996799.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas beigongshangi
  ORGANISM  Pseudoxanthomonas beigongshangi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018644.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06961.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Pseudoxanthomonas beigongshangi"
                     /db_xref="taxon:2782537"
     Protein         1..203
                     /product="DUF1294 domain-containing protein"
                     /calculated_mol_wt=22324
     Region          5..67
                     /region_name="CSP_CDS"
                     /note="Cold-Shock Protein (CSP) contains an S1-like
                     cold-shock domain (CSD) that is found in eukaryotes,
                     prokaryotes, and archaea. CSP's include the major
                     cold-shock proteins CspA and CspB in bacteria and the
                     eukaryotic gene regulatory factor Y-box protein; cd04458"
                     /db_xref="CDD:239905"
     Site            order(9,18,29,57)
                     /site_type="DNA binding"
                     /note="DNA-binding site [nucleotide binding]"
                     /db_xref="CDD:239905"
     Site            order(15..21,28..31)
                     /site_type="active"
                     /note="RNA-binding motif [active]"
                     /db_xref="CDD:239905"
     Region          103..188
                     /region_name="YsdA"
                     /note="Uncharacterized membrane protein YsdA, DUF1294
                     family [Function unknown]; COG3326"
                     /db_xref="CDD:442555"
ORIGIN      
        1 mrfagritdw ngergfgfvv phgggdrafv hvsefqrgsr ppvvgdlisy etrkdakgrl
       61 naktirfagq kieapgkhrr iprlgialaf fllvaiftlf gkvpvmvsla ylavslvsyv
      121 lycldkaaae keyrripett lhfvdllfgw pgglvaqqqc rhktakdsfq rtfwltvlfn
      181 lagafvlvas giaqrlssal lga
//
LOCUS       WP_235997010              71 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-dependent RNA helicase RhlB, partial [Pseudoxanthomonas
            beigongshangi].
ACCESSION   WP_235997010
VERSION     WP_235997010.1
KEYWORDS    RefSeq.
SOURCE      Pseudoxanthomonas beigongshangi
  ORGANISM  Pseudoxanthomonas beigongshangi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023720.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12300.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Pseudoxanthomonas beigongshangi"
                     /db_xref="taxon:2782537"
     gene            <1..71
                     /gene="rhlB"
     Protein         <1..71
                     /product="ATP-dependent RNA helicase RhlB"
                     /EC_number="3.6.4.13"
                     /GO_function="GO:0016817 - hydrolase activity, acting on
                     acid anhydrides [Evidence IEA]"
     Region          <5..71
                     /region_name="PRK04537"
                     /note="ATP-dependent RNA helicase RhlB; Provisional"
                     /db_xref="CDD:235307"
ORIGIN      
        1 hperaegerg prkrrrrrhg rpvenadagi aastsapaag kpaanapvag khdkpsffsr
       61 lgrklkslvg g
//
LOCUS       WP_235997171             289 aa            linear   BCT 02-MAR-2025
DEFINITION  ArdC-like ssDNA-binding domain-containing protein [Nocardiopsis
            coralli].
ACCESSION   WP_235997171
VERSION     WP_235997171.1
KEYWORDS    RefSeq.
SOURCE      Nocardiopsis coralli
  ORGANISM  Nocardiopsis coralli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Nocardiopsidaceae; Nocardiopsis.
REFERENCE   1  (residues 1 to 289)
  AUTHORS   Gonzalez-Montes,L., Del Campo,I., Garcillan-Barcia,M.P., de la
            Cruz,F. and Moncalian,G.
  TITLE     ArdC, a ssDNA-binding protein with a metalloprotease domain,
            overpasses the recipient hsdRMS restriction system broadening
            conjugation host range
  JOURNAL   PLoS Genet 16 (4), e1008750 (2020)
   PUBMED   32348296
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 289)
  AUTHORS   Krishnan,A., Burroughs,A.M., Iyer,L.M. and Aravind,L.
  TITLE     Unexpected Evolution of Lesion-Recognition Modules in Eukaryotic
            NER and Kinetoplast DNA Dynamics Proteins from Bacterial Mobile
            Elements
  JOURNAL   iScience 9, 192-208 (2018)
   PUBMED   30396152
REFERENCE   3  (residues 1 to 289)
  AUTHORS   Iyer,L.M., Burroughs,A.M., Anand,S., de Souza,R.F. and Aravind,L.
  TITLE     Polyvalent Proteins, a Pervasive Theme in the Intergenomic
            Biological Conflicts of Bacteriophages and Conjugative Elements
  JOURNAL   J Bacteriol 199 (15), e00245-17 (2017)
   PUBMED   28559295
  REMARK    Publication Status: Online-Only
REFERENCE   4  (residues 1 to 289)
  AUTHORS   Belogurov,A.A., Delver,E.P., Agafonova,O.V., Belogurova,N.G.,
            Lee,L.Y. and Kado,C.I.
  TITLE     Antirestriction protein Ard (Type C) encoded by IncW plasmid pSa
            has a high similarity to the 'protein transport' domain of TraC1
            primase of promiscuous plasmid RP4
  JOURNAL   J Mol Biol 296 (4), 969-977 (2000)
   PUBMED   10686096
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019997.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08401.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Nocardiopsis coralli"
                     /db_xref="taxon:2772213"
     Protein         1..289
                     /product="ArdC-like ssDNA-binding domain-containing
                     protein"
                     /GO_function="GO:0003697 - single-stranded DNA binding
                     [Evidence IEA]"
                     /calculated_mol_wt=31823
ORIGIN      
        1 msprkstltp qqrrarleqa hehlnsavek lttsegwral issrawlrhy sannvmrilq
       61 qcpnardvra fgawlnagrp vckgergiri lapmryraed eeseperedg crryevrgft
      121 vttvfdvsqt eggpapepdg vvpqelrgla pdqlwdqvaa mvttrgytve hgdcgeaygy
      181 vhyptrtvrv rgdvdpaqav ktlthelahi lcehstregl srqraeveae svacvvgsvm
      241 gletldysvp yvagwaddsd vahaaaarvm avadqitahl iehaeqaaa
//
LOCUS       WP_235997244             749 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6351 family protein [Nocardiopsis coralli].
ACCESSION   WP_235997244
VERSION     WP_235997244.1
KEYWORDS    RefSeq.
SOURCE      Nocardiopsis coralli
  ORGANISM  Nocardiopsis coralli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Nocardiopsidaceae; Nocardiopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040071.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19878.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Nocardiopsis coralli"
                     /db_xref="taxon:2772213"
     Protein         1..749
                     /product="DUF6351 family protein"
                     /calculated_mol_wt=79553
     Region          50..741
                     /region_name="DUF6351"
                     /note="Tannase-like family of unknown function (DUF6351);
                     pfam19878"
                     /db_xref="CDD:437710"
ORIGIN      
        1 mgtgaavlaa vlavsgtals sgppatagal ppsaapfepg agaaseelsv svlssrpdav
       61 mggsalvrve ppasadpesv rlsaagtdvt drlrtvdsgg slaleglltg lpegeselea
      121 hldervsvaa lgrersaslt vvnhpaqgpv vsgshqepfl cdtddfelsg gegrtlgpal
      181 dedcsartdv rhvyrdtdgq wsplpdpesv psdadtatta agarvpfvvr vetgtanrsv
      241 yetavlhtpe deepdpwtpp pswngrlvyk fgggcaggwy vqgkrsagvl dgpmlergya
      301 vassslnvfa nncndllaae tvsavherfv esmgvphstl gwgasggayq ahqtadnypg
      361 lldgivvsqa fpdvgfsvvp avtdalllre yarshegeld rveqqavsgf lrhesierla
      421 reagrvdprg rcredlpeee lyhpednpgg arcevfaave nvygtdpetg lprrpldnvg
      481 vqyglhtlme gvidvdqflh lnehigglda dgavsdersv adpegteaay rsgrllnggg
      541 gladipvvdh rfyqddepeg dlhmryhsfs vrerleqang tadnhvmlae hrdrspkgfv
      601 stsplamrsl eelddwvsgm qeqqalnpgw epidamrasr paflqdscwi gtdedaervv
      661 geqlplpagq gdrcadafpv htsprieagg plasdvvact lepfdaarhp vefteeqaer
      721 aeevfsegvc dwdspgrgqq gldgtwqrf
//
LOCUS       WP_235997128             274 aa            linear   BCT 02-MAR-2025
DEFINITION  PIG-L family deacetylase [Aestuariimicrobium ganziense].
ACCESSION   WP_235997128
VERSION     WP_235997128.1
KEYWORDS    RefSeq.
SOURCE      Aestuariimicrobium ganziense
  ORGANISM  Aestuariimicrobium ganziense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Propionibacteriaceae; Aestuariimicrobium.
REFERENCE   1  (residues 1 to 274)
  AUTHORS   Handa,N., Terada,T., Kamewari,Y., Hamana,H., Tame,J.R., Park,S.Y.,
            Kinoshita,K., Ota,M., Nakamura,H., Kuramitsu,S., Shirouzu,M. and
            Yokoyama,S.
  TITLE     Crystal structure of the conserved protein TT1542 from Thermus
            thermophilus HB8
  JOURNAL   Protein Sci 12 (8), 1621-1632 (2003)
   PUBMED   12876312
REFERENCE   2  (residues 1 to 274)
  AUTHORS   Watanabe,R., Ohishi,K., Maeda,Y., Nakamura,N. and Kinoshita,T.
  TITLE     Mammalian PIG-L and its yeast homologue Gpi12p are
            N-acetylglucosaminylphosphatidylinositol de-N-acetylases essential
            in glycosylphosphatidylinositol biosynthesis
  JOURNAL   Biochem J 339 (Pt 1) (Pt 1), 185-192 (1999)
   PUBMED   10085243
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014625.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02585.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Aestuariimicrobium ganziense"
                     /db_xref="taxon:2773677"
     Protein         1..274
                     /product="PIG-L family deacetylase"
                     /calculated_mol_wt=30121
     Region          6..226
                     /region_name="PIG-L"
                     /note="GlcNAc-PI de-N-acetylase; cl00929"
                     /db_xref="CDD:445182"
     Region          <227..>259
                     /region_name="Gsh2"
                     /note="Gamma-glutamylcysteine synthetase [Coenzyme
                     transport and metabolism]; COG3572"
                     /db_xref="CDD:442793"
ORIGIN      
        1 mstlvfmhah pddessqtag tmalahdagh rvvwicctng dhgavpddld etddlvslrr
       61 reaeasarvl gvdrlvwlgy adsgmhgwdq nshefafvma dvteagrrva dvlddedadv
      121 ligydfhgny ghpdhvqvhr vmnaaveqaa rrprvlqvtg nrdamrrgfa aaveaglmpp
      181 ddawdidspl pdgnlfgtpe deiqwavdvr gvidqkraal achasqpdaa gmllmpeemf
      241 regfgwehyi eqgldqpmiv gwpfddqtpv qrsa
//
LOCUS       WP_235997393             136 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Nocardiopsis coralli].
ACCESSION   WP_235997393
VERSION     WP_235997393.1
KEYWORDS    RefSeq.
SOURCE      Nocardiopsis coralli
  ORGANISM  Nocardiopsis coralli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Nocardiopsidaceae; Nocardiopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Nocardiopsis coralli"
                     /db_xref="taxon:2772213"
     Protein         1..136
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=15066
     Region          7..118
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(8..10,24,40..42)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133388"
ORIGIN      
        1 msdvttmqig elakrigvsa rslryyeqqg llsptrgdng yriydelsiv raenikqlfe
       61 agltsadviq yiengcldrp laesppcsae ldtvqerlag lderiarlqs lrerlvshht
      121 elahaieaeq vpesrg
//
LOCUS       WP_235997360             570 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein
            [Nocardiopsis coralli].
ACCESSION   WP_235997360
VERSION     WP_235997360.1
KEYWORDS    RefSeq.
SOURCE      Nocardiopsis coralli
  ORGANISM  Nocardiopsis coralli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Nocardiopsidaceae; Nocardiopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Nocardiopsis coralli"
                     /db_xref="taxon:2772213"
     Protein         1..570
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=60525
     Region          11..560
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
ORIGIN      
        1 marptlrepg tpdargpwrf lwwlirsqpl rvlrgallgi vwmlllmlpp yliaravddg
       61 lragdhrall gwvgvflvvt vgntvvsilr hrtmsmvrmd aalrtirvla rhaaylggpp
      121 lrrpssgeft qiqgvdvarv sqiltmtgpg vgavaayaav agmlltispv lavvvlvgvp
      181 lmaltvgpll drvhgratey rrqegeltal agdvvaglrv lrglgggrfm deryrgrsae
      241 lleqgyrlsr ptswfqavsa clpvvflglv twlvarmavg gqitvgeava vygfvaalav
      301 pvfflveaag dlvighvslr rvtgllslrp eltdpeeprp aperpaelfd pgsgvrvrpg
      361 vttalvsaga gdavvierla rltgsdatwg gtpldtvala dvrarilang ndarvfggtl
      421 reamdphhhl pdeqvrhalw tagasellta apegldapvq dragdlsggq rqrlllarav
      481 aadpevlmll dpvsavdsht etmvaarlaa aregrttvla ttappllela ehvvflvdgr
      541 vraegehagl aetqpeyral tvraadgspa
//
LOCUS       WP_235997643             773 aa            linear   BCT 02-MAR-2025
DEFINITION  type IV secretion system protein [Nocardiopsis coralli].
ACCESSION   WP_235997643
VERSION     WP_235997643.1
KEYWORDS    RefSeq.
SOURCE      Nocardiopsis coralli
  ORGANISM  Nocardiopsis coralli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Nocardiopsidaceae; Nocardiopsis.
REFERENCE   1  (residues 1 to 773)
  AUTHORS   Li,P.L., Hwang,I., Miyagi,H., True,H. and Farrand,S.K.
  TITLE     Essential components of the Ti plasmid trb system, a type IV
            macromolecular transporter
  JOURNAL   J Bacteriol 181 (16), 5033-5041 (1999)
   PUBMED   10438776
REFERENCE   2  (residues 1 to 773)
  AUTHORS   Liang,Y., Aoyama,T. and Oka,A.
  TITLE     Structural characterization of the virB operon on the
            hairy-root-inducing plasmid A4
  JOURNAL   DNA Res 5 (2), 87-93 (1998)
   PUBMED   9679196
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04610.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..773
                     /organism="Nocardiopsis coralli"
                     /db_xref="taxon:2772213"
     Protein         1..773
                     /product="type IV secretion system protein"
                     /GO_process="GO:0030255 - protein secretion by the type IV
                     secretion system [Evidence IEA]"
                     /calculated_mol_wt=81313
ORIGIN      
        1 mtthqhgpkr swrrvvmmll lsagflllpi tgaqanplde mcpgepaplp esagvgsdgl
       61 lvppqsqdai dnspeglppd ssmygqygta gtqwhmitet cidgisegaq atlsntawdl
      121 sktinqstit vyqaatsdgl lssltemved gvaalrdgvw rpliptliil gtiwlgwygl
      181 ikrrmtltle sslwmilata mgmwilvqpa tvmglanslv nsgtqlvtsa vgqipnqssg
      241 agvcpanaqq aeradwesea dyqvrrnadm lwsslvcqpw vagqfgsgve arsaefahgt
      301 dlmaaqgitr veqqqiidee vdavelmsdk qdsysdiagd ieenyasvyp lfsgedpgsr
      361 igvaslalfs sifagglila asvalivlki aflllfllap iffligihpg ygrmvllrwl
      421 elivglllkq ifivmlisll vmaygmimss nlgwglqmil lalftlalfi yrkpfahlfs
      481 svnansftsr vvsdaaqsqa lgrsaavlpp vayaraqnwg rrrapqlaag aagtpagngt
      541 dqpvpqddap tpdreparar arggygrvrg ndappplnvn rnggsggggp rpgpgpggrs
      601 teeapnlrgs qgssipprps ggytgtgdsg wggvfgtapg grsdgsrsne gsgggfvggv
      661 pagggraaaa erpapgsgrg ifqgredtpp qgalggqssr wgaprekrer kapprqprqa
      721 paapskrgdg egswltgsnk rndnapitpf wgeggsggtr drkrdvpfwl ndd
//
LOCUS       WP_235997967             148 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF742 domain-containing protein [Nocardiopsis coralli].
ACCESSION   WP_235997967
VERSION     WP_235997967.1
KEYWORDS    RefSeq.
SOURCE      Nocardiopsis coralli
  ORGANISM  Nocardiopsis coralli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Nocardiopsidaceae; Nocardiopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017170.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05331.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Nocardiopsis coralli"
                     /db_xref="taxon:2772213"
     Protein         1..148
                     /product="DUF742 domain-containing protein"
                     /calculated_mol_wt=15648
     Region          37..148
                     /region_name="HTH_CRP"
                     /note="helix_turn_helix, cAMP Regulatory protein
                     C-terminus; DNA binding domain of prokaryotic regulatory
                     proteins belonging to the catabolite activator protein
                     family; cl46859"
                     /db_xref="CDD:481199"
ORIGIN      
        1 mtaprgrgtg tpwdggrghp gtavegghap vvgdstagpl vrpytmtkgr trpgtdggrl
       61 dlitlvvtva dredrarepe heailrlcrk pvsvaevsar ldvpltvvrv llsdllvegd
      121 lrtraaapvt klpekkvlqa vldgirrl
//
LOCUS       WP_235998033              85 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase [Aestuariimicrobium ganziense].
ACCESSION   WP_235998033
VERSION     WP_235998033.1
KEYWORDS    RefSeq.
SOURCE      Aestuariimicrobium ganziense
  ORGANISM  Aestuariimicrobium ganziense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Propionibacteriaceae; Aestuariimicrobium.
REFERENCE   1  (residues 1 to 85)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 85)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Aestuariimicrobium ganziense"
                     /db_xref="taxon:2773677"
     Protein         1..85
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=9212
     Region          6..>81
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
ORIGIN      
        1 mgetdmryrd ladtgvqvsn lclgtmmfgg snnadrddcs riinaaidag infldtadvy
       61 srgeseeivg aairdrrdev vplrr
//
LOCUS       WP_235998185             602 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Hymenobacter sp. BT559].
ACCESSION   WP_235998185
VERSION     WP_235998185.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter sp. BT559
  ORGANISM  Hymenobacter sp. BT559
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 602)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Hymenobacter sp. BT559"
                     /db_xref="taxon:2795729"
     Protein         1..602
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=65283
     Region          5..287
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(9,11..12,14,33..35,76..78,106..108,122,126,145..148)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(84,108,122,126)
                     /site_type="active"
                     /db_xref="CDD:187535"
     Region          321..602
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
ORIGIN      
        1 mnlpivvagg tgnlgrriie allqrgatvr alvrpetdpa kiaaltqlgv dvrpvdladv
       61 aaltqacaga gcvvsalagl revivdtqav llaaavaagv prfipsdfcs dytqqpagln
      121 rnfdlrrefq ahldqapiaa tsilngafae vlayniplld fkqhqvgywe dadwkidftt
      181 iddtaaftaa aaldadsprw lriasfqlsp relataaeea grghfevvrl garadfaahi
      241 qqaraanpag ehelyanwqq mqyllsmfsv qnnpldnsry pgltwtspqa vlatpgdapa
      301 dpeaaytdae likklpgfsn hyvtvngvrl hyveggsgqp lvclpgwpqt wysfhpiapt
      361 laqhyrviiv dirgmgssdk paagydkktm aqdiyalvqh lgldkvsllg hdiggmvaas
      421 fafnypeate kliladgahp sdgmrymsll papgafeakm dghqpyvwwm afnqvkglpe
      481 kllagrfqhl ldylfayvmf desrmsafdr avyaaaynep esiraangwy qalgqdmada
      541 ntyapltmpv lgigsyvsye hmrqglpsma pgaqviglld sghymfeekp elvlaavldf
      601 lk
//
LOCUS       WP_235998290             495 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Hymenobacter sp. BT559].
ACCESSION   WP_235998290
VERSION     WP_235998290.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter sp. BT559
  ORGANISM  Hymenobacter sp. BT559
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Hymenobacter sp. BT559"
                     /db_xref="taxon:2795729"
     Protein         1..495
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=53861
     Region          24..462
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(34..35,38..39,42,74,130..131,133..135,138,158,
                     161..162,165,262,265..266,269..271,274,313,317,388..389,
                     393,397,413,416..417,420..421,424)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 magsgvtidn phlrakprls fwqiwnmsfg flgiqfgfal qngnmsrife tmgakedela
       61 flwlaapatg livqpivgyf sdrtwssrwg rrrpyfliga ilaslalllv phvsalwmaa
      121 gmlwimdasi nismepfral vgdllpsnqr tagfgfqtff igigavvgsl lpviysklvg
      181 fsntapaghi spaltyafyt ggavffvavl ytvlttreyp pvdmaefeae kqrtggfwag
      241 ikasfagvad mprtmrqlav vqffswlalf smwiyatsai thyvyhtndp tsklynegad
      301 wwnvcqsvyn gvsalaaltl piiaratsrr athlicltag glglisiyfi gnypidsylp
      361 avnlfgftih lrtvdgllll pmigvgfawa silsipyaml agalpsnkmg yymgvfnffi
      421 vlpqmlasvt lgfftkqvfg gnsaltlvlg gcsmilsgll tlrvhdaddi rlpnnltpae
      481 nlayeaslad anpnv
//
LOCUS       WP_235998327             133 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF983 domain-containing protein [Hymenobacter sp. BT559].
ACCESSION   WP_235998327
VERSION     WP_235998327.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter sp. BT559
  ORGANISM  Hymenobacter sp. BT559
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017935.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06170.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Hymenobacter sp. BT559"
                     /db_xref="taxon:2795729"
     Protein         1..133
                     /product="DUF983 domain-containing protein"
                     /calculated_mol_wt=14982
     Region          1..123
                     /region_name="DUF983"
                     /note="Protein of unknown function (DUF983); cl02211"
                     /db_xref="CDD:470495"
ORIGIN      
        1 mkpvrawwla llalrcphch tgplfnygmy nlghftdmpe scpvcgqhye pepgfywgam
       61 yisfafavpi vlgsgavlyw ffgdpptwvy vttvavvmll ltppsfryar avmlyafggv
      121 rfdkrylekg raa
//
LOCUS       WP_235998413             162 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4442 domain-containing protein [Hymenobacter sp. BT559].
ACCESSION   WP_235998413
VERSION     WP_235998413.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter sp. BT559
  ORGANISM  Hymenobacter sp. BT559
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025892.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14539.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Hymenobacter sp. BT559"
                     /db_xref="taxon:2795729"
     Protein         1..162
                     /product="DUF4442 domain-containing protein"
                     /calculated_mol_wt=17379
ORIGIN      
        1 mptdtlamqa frrqvlsphk lrlfmlrklp lawlaglrlt altpeaatvt irykyltqnp
       61 frsiyfaala maaelasgiq ammhtqgggp vsmlvvglqa efskkavgli tftcpdgaai
      121 aaaiaesrat gqgrtvtcts tgrdevgdmv avfqirwsfk ak
//
LOCUS       WP_235998414             439 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Hymenobacter sp. BT559].
ACCESSION   WP_235998414
VERSION     WP_235998414.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter sp. BT559
  ORGANISM  Hymenobacter sp. BT559
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Hymenobacter sp. BT559"
                     /db_xref="taxon:2795729"
     Protein         1..439
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47528
     Region          16..396
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(24..25,28..29,32,63,123..124,126..128,131,147,
                     150..151,154,249,252..253,256..258,261,290,294,347..348,
                     352,356,372,375..376,379..380,383)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:341038"
ORIGIN      
        1 mkslvlrdsa rlryftffyl yvmqgipsgf altavynyli gqglsaravg sfaatvglpw
       61 tfqfvwgpli dkyqysiigh rkqwvvltql vavaaslsll lvhdpvrelt llgvvffvhs
      121 vfasiqdasv daiaisvvpv aergrvnafm ragslagwav ggaalsyllh hggfgraawv
      181 qslvllaftv ltffiklert drllpqfgaa qrtdrpvlte eenpslgwlf relwhsivek
      241 hslrafgiiv lgymsaslfg nafnfhliht igwadtflst lqgtwgsils fgvlmvggvl
      301 adrlgasqlq rwvllalatf lllfsslssl wvvpamgiag vmmgsladpl lsvsampllm
      361 aycrpkiegs qfttymalvn lctvtasyln gwllevttap riglgcgvll mglllalyrl
      421 dpnskaaaqa qltapaaaa
//
LOCUS       WP_235998452             519 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase-fold protein [Hymenobacter sp. BT559].
ACCESSION   WP_235998452
VERSION     WP_235998452.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter sp. BT559
  ORGANISM  Hymenobacter sp. BT559
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 519)
  AUTHORS   Goins,C.M., Dajnowicz,S., Smith,M.D., Parks,J.M. and Ronning,D.R.
  TITLE     Mycolyltransferase from Mycobacterium tuberculosis in covalent
            complex with tetrahydrolipstatin provides insights into antigen 85
            catalysis
  JOURNAL   J Biol Chem 293 (10), 3651-3662 (2018)
   PUBMED   29352107
REFERENCE   2  (residues 1 to 519)
  AUTHORS   van Straaten,K.E., Gonzalez,C.F., Valladares,R.B., Xu,X.,
            Savchenko,A.V. and Sanders,D.A.
  TITLE     The structure of a putative S-formylglutathione hydrolase from
            Agrobacterium tumefaciens
  JOURNAL   Protein Sci 18 (10), 2196-2202 (2009)
   PUBMED   19653299
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012958.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00756.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Hymenobacter sp. BT559"
                     /db_xref="taxon:2795729"
     Protein         1..519
                     /product="alpha/beta hydrolase-fold protein"
                     /calculated_mol_wt=57408
     Region          <18..274
                     /region_name="Fes"
                     /note="Enterochelin esterase or related enzyme [Inorganic
                     ion transport and metabolism]; COG2382"
                     /db_xref="CDD:441948"
     Region          360..495
                     /region_name="DinB_2"
                     /note="DinB superfamily; pfam12867"
                     /db_xref="CDD:463733"
ORIGIN      
        1 mavfrfqspr gatvavrrde slfsirlgrv vrldvvlppg fdvaaaqpyp vlylndgqdl
       61 qrlrlpttln ylykrgavrp fvlvavhaad rlqeygvaaq pdylgrgsra ghytefvlke
      121 llpyvqahyh asadpaeavv agmslgglta fdlawhhpea fqragsfsgs fwwrsrglnd
      181 gytdadrlmh slvsaraprp gqqywlqtgt ddetsdrnnn giidsiddtl dlmatlaqqg
      241 lpteavryve vpgghhhqdt wgaimpdflr wafgvegvdt hdylqhhlga hllagkrhlr
      301 rrplgaarlg frylakgraa tfatmpatat parpapgtyq pyaqgyldli pegadplall
      361 rqqpaelhrd larlteaqal mryapgkwtp kevllhiidt eriftyralr fargdaqslp
      421 gfneneyaat seandrsmsd llteyhavra atlalfssft paqldrvgla nggatsvral
      481 lfitagherh hlgilreryw pmmpapdtal aqqpaaplr
//
LOCUS       WP_235998494             132 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF983 domain-containing protein [unclassified
            Hymenobacter].
ACCESSION   WP_235998494
VERSION     WP_235998494.1
KEYWORDS    RefSeq.
SOURCE      unclassified Hymenobacter
  ORGANISM  unclassified Hymenobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017935.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06170.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="unclassified Hymenobacter"
                     /db_xref="taxon:2615202"
     Protein         1..132
                     /product="DUF983 domain-containing protein"
                     /calculated_mol_wt=14394
     Region          4..>93
                     /region_name="DUF983"
                     /note="Protein of unknown function (DUF983); cl02211"
                     /db_xref="CDD:470495"
ORIGIN      
        1 maapasptla llslrcphch egrlfthsaf nlahftdmpe hcevcavple pepgfywgam
       61 fisygfnvat vltigallyf vggdpdvwvy vltvagaala lapaalrysr almlywfgga
      121 ryrfdprrla ra
//
LOCUS       WP_235998513             135 aa            linear   BCT 02-MAR-2025
DEFINITION  nuclear transport factor 2 family protein [Hymenobacter sp. BT559].
ACCESSION   WP_235998513
VERSION     WP_235998513.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter sp. BT559
  ORGANISM  Hymenobacter sp. BT559
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024092.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12680.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Hymenobacter sp. BT559"
                     /db_xref="taxon:2795729"
     Protein         1..135
                     /product="nuclear transport factor 2 family protein"
                     /calculated_mol_wt=15786
     Region          24..135
                     /region_name="SnoaL"
                     /note="Uncharacterized conserved protein, contains
                     SnoaL-like domain [Function unknown]; COG4538"
                     /db_xref="CDD:443604"
ORIGIN      
        1 mtglfnpevi wqeqrqlget eqqqdlirki yaafnardip tilavfdpqv rwsrawegdy
       61 avgheqvrdy wlrqwqeldp hveptgfarr engqlevtvq qrvkdlqghv vfdglvkhly
      121 tieegvikqm dieka
//
LOCUS       WP_235998556             450 aa            linear   BCT 02-MAR-2025
DEFINITION  efflux RND transporter permease subunit [Hymenobacter sp. BT559].
ACCESSION   WP_235998556
VERSION     WP_235998556.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter sp. BT559
  ORGANISM  Hymenobacter sp. BT559
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 450)
  AUTHORS   Murakami,S., Nakashima,R., Yamashita,E. and Yamaguchi,A.
  TITLE     Crystal structure of bacterial multidrug efflux transporter AcrB
  JOURNAL   Nature 419 (6907), 587-593 (2002)
   PUBMED   12374972
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00873.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Hymenobacter sp. BT559"
                     /db_xref="taxon:2795729"
     Protein         1..450
                     /product="efflux RND transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=48493
     Region          1..>420
                     /region_name="CusA"
                     /note="Cu/Ag efflux pump CusA [Inorganic ion transport and
                     metabolism]; COG3696"
                     /db_xref="CDD:442911"
ORIGIN      
        1 mieqlislsl rnrgivllla agllvwgifs iraskidaip dlsenqvivf tewagrgpqi
       61 iedqvtyplv tnlqglaqvr avraasmfgm sfvyvifndn tdiywarerv lerlnyaqrl
      121 lpagltptlg pdgtgvghvl wytlnapkld lgeqralqdw yvkfglqtvp gvsevasfgg
      181 fqpeyqvtvd ptkltyynvs lpqvlaavrq nnneaggrkf eqagvgyiik tsgyiqdvat
      241 lenvpvltrp ggvplrlrdl gtvqmtgesr lgifdhngqg eavggivvmr ygenadevit
      301 rvkakmteva kglpagvsfd ivydrsglie esvanikhtl leemavvslv vlvflfhwrs
      361 alsillqipi tiaasfilln afgissnims ltgialaigv ivdngivmae nayrnlalhq
      421 aaeeaaagpp gapppvpaaa lstpepiphd
//
LOCUS       WP_235998580              43 aa            linear   BCT 02-MAR-2025
DEFINITION  PDDEXK nuclease domain-containing protein [Hymenobacter sp. BT559].
ACCESSION   WP_235998580
VERSION     WP_235998580.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter sp. BT559
  ORGANISM  Hymenobacter sp. BT559
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 43)
  AUTHORS   Hu,P., Janga,S.C., Babu,M., Diaz-Mejia,J.J., Butland,G., Yang,W.,
            Pogoutse,O., Guo,X., Phanse,S., Wong,P., Chandran,S.,
            Christopoulos,C., Nazarians-Armavil,A., Nasseri,N.K., Musso,G.,
            Ali,M., Nazemof,N., Eroukova,V., Golshani,A., Paccanaro,A.,
            Greenblatt,J.F., Moreno-Hagelsieb,G. and Emili,A.
  TITLE     Global functional atlas of Escherichia coli encompassing previously
            uncharacterized proteins
  JOURNAL   PLoS Biol 7 (4), e96 (2009)
   PUBMED   19402753
REFERENCE   2  (residues 1 to 43)
  AUTHORS   Kosinski,J., Feder,M. and Bujnicki,J.M.
  TITLE     The PD-(D/E)XK superfamily revisited: identification of new members
            among proteins involved in DNA metabolism and functional
            predictions for domains of (hitherto) unknown function
  JOURNAL   BMC Bioinformatics 6, 172 (2005)
   PUBMED   16011798
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018009.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06250.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..43
                     /organism="Hymenobacter sp. BT559"
                     /db_xref="taxon:2795729"
     Protein         1..43
                     /product="PDDEXK nuclease domain-containing protein"
                     /calculated_mol_wt=4674
     Region          <4..43
                     /region_name="YhcG_C"
                     /note="YhcG PDDEXK nuclease domain; pfam06250"
                     /db_xref="CDD:428849"
ORIGIN      
        1 mavdelrhle dqpsiglllc knknrvvaeh avrdvhktig vae
//
LOCUS       WP_235998745            1044 aa            linear   BCT 02-MAR-2025
DEFINITION  ThuA domain-containing protein [Qaidamihabitans albus].
ACCESSION   WP_235998745
VERSION     WP_235998745.1
KEYWORDS    RefSeq.
SOURCE      Qaidamihabitans albus
  ORGANISM  Qaidamihabitans albus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Qaidamihabitans.
REFERENCE   1  (residues 1 to 1044)
  AUTHORS   Ampomah,O.Y., Avetisyan,A., Hansen,E., Svenson,J., Huser,T.,
            Jensen,J.B. and Bhuvaneswari,T.V.
  TITLE     The thuEFGKAB operon of rhizobia and agrobacterium tumefaciens
            codes for transport of trehalose, maltitol, and isomers of sucrose
            and their assimilation through the formation of their 3-keto
            derivatives
  JOURNAL   J Bacteriol 195 (17), 3797-3807 (2013)
   PUBMED   23772075
REFERENCE   2  (residues 1 to 1044)
  AUTHORS   Ampomah,O.Y., Jensen,J.B. and Bhuvaneswari,T.V.
  TITLE     Lack of trehalose catabolism in Sinorhizobium species increases
            their nodulation competitiveness on certain host genotypes
  JOURNAL   New Phytol 179 (2), 495-504 (2008)
   PUBMED   19086182
REFERENCE   3  (residues 1 to 1044)
  AUTHORS   Jensen,J.B., Peters,N.K. and Bhuvaneswari,T.V.
  TITLE     Redundancy in periplasmic binding protein-dependent transport
            systems for trehalose, sucrose, and maltose in Sinorhizobium
            meliloti
  JOURNAL   J Bacteriol 184 (11), 2978-2986 (2002)
   PUBMED   12003938
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018038.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06283.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Qaidamihabitans albus"
                     /db_xref="taxon:2795733"
     Protein         1..1044
                     /product="ThuA domain-containing protein"
                     /calculated_mol_wt=112425
     Region          21..237
                     /region_name="ThuA"
                     /note="Trehalose utilization; pfam06283"
                     /db_xref="CDD:461867"
     Region          230..704
                     /region_name="YliI"
                     /note="Glucose/arabinose dehydrogenase, beta-propeller
                     fold [Carbohydrate transport and metabolism]; COG2133"
                     /db_xref="CDD:441736"
     Region          717..795
                     /region_name="PKD"
                     /note="Repeats in polycystic kidney disease 1 (PKD1) and
                     other proteins; smart00089"
                     /db_xref="CDD:214510"
     Region          912..1037
                     /region_name="CBM6_xylanase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); many are
                     appended to glycoside hydrolase (GH) family 11 and GH43
                     xylanase domains; cd04084"
                     /db_xref="CDD:271150"
     Site            order(925,937..938,995,1031)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:271150"
ORIGIN      
        1 mlltlglaaa lpaaaqsrfs vlvfskvtnf yhesipagia aieqlgaehg fdveatddaa
       61 aftddnlarf davvfnntns tpqsgdllda gqreafqryi rggggwtglh aasaserdwa
      121 wyeglvgaif dyhpapqvgr vkvldrahps tkdlpelweq heewynwran ptgkvhtlaq
      181 ikvrdgingl degvdhpysw cqnydggrsw ftagghaaek fsdalflehl lggiewaaga
      241 apgdcsatqt gnfqrvalae egladpfela vapdrrvfyi qrtgalkvid qetrqvttal
      301 dfqytpemts qsdgllgltl dpgfaennhl yllysdqaep rmnlsrftvs adstvdpase
      361 kvlleiptyr gegranshma gsitfdskgn lyvatgdntd pfasdgfapi derdgrrawd
      421 aqgtsgntnd lrgkvlritp qpdgtytvpe gnlfppgtdl trpeiyvmgl rnpfritvdp
      481 qtdallvgdy gpdarqadpe rgpegtvefl riteagnhgw pyctgvntpf ndydfatges
      541 gpvfdcgnlv ndspnntglt elppatpawm wyaysqspqf pelgtggggp magpvydydp
      601 dnplvtkfpe yfdgkwfnye ltrkwfkvms vqqrdqtftd prfaparage llsingifqd
      661 mtwiqpfeaq fgpdgslyvi dfgegsgtgr ggsndgagiy ridyvaegrp ptakvdvsad
      721 sgrapltvef ssagsaggdg epltyawdfd ndgtvdstea npthtfterg qytvrltvas
      781 ttnpeltgva tteitagntr pdvrivlpkd ggmfdfgdti pfvvqvndre dgsidcskvv
      841 vqsqlghddh lhpmdnvtgc rgevttdagd shgpgqnlya alsaqytdgg gpgdvpaltg
      901 sahvtlepkf keaehfedtg gvqvlnrgda sagkrlgeie hgdwvayepv hlmgidsvtp
      961 avgsggiggt iefradsptg ellgsvevpn tggwgevvtp tvpltdpgrt vklhlvfsnp
     1021 dwspdqadll sldslqfngk gvtr
//
LOCUS       WP_235998650             689 aa            linear   BCT 02-MAR-2025
DEFINITION  Atu4866 domain-containing protein [Qaidamihabitans albus].
ACCESSION   WP_235998650
VERSION     WP_235998650.1
KEYWORDS    RefSeq.
SOURCE      Qaidamihabitans albus
  ORGANISM  Qaidamihabitans albus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Qaidamihabitans.
REFERENCE   1  (residues 1 to 689)
  AUTHORS   Ai,X., Semesi,A., Yee,A., Arrowsmith,C.H., Choy,W.Y. and Li,S.S.
  TITLE     The hypothetical protein Atu4866 from Agrobacterium tumefaciens
            adopts a streptavidin-like fold
  JOURNAL   Protein Sci 17 (1), 154-158 (2008)
   PUBMED   18042676
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022947.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11512.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Qaidamihabitans albus"
                     /db_xref="taxon:2795733"
     Protein         1..689
                     /product="Atu4866 domain-containing protein"
                     /calculated_mol_wt=73174
     Region          25..464
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
     Site            order(86,88,239,267,320)
                     /site_type="active"
                     /db_xref="CDD:238623"
     Region          478..>556
                     /region_name="AllB"
                     /note="Dihydroorotase or related cyclic amidohydrolase
                     [Nucleotide transport and metabolism]; COG0044"
                     /db_xref="CDD:439814"
     Region          607..678
                     /region_name="Atu4866"
                     /note="Agrobacterium tumefaciens protein Atu4866;
                     pfam11512"
                     /db_xref="CDD:431913"
ORIGIN      
        1 mtsrahqhse alsttllaae adpdraillt gatvvtmdpt lgtldgadll irgdriadvg
       61 hglhapdaiv vdvtgsvvap gfvdthrhaw qaqmrrtipd vddlagylts tlataysphd
      121 myvgtrlaal taldcgittm ldfshnsrts ehsdaavtal ldtgirgvha amgphfgswd
      181 qqwpadlarl kttyfssddr lvtlrlaala tpdiagprla ygpdlarvaa dldigvsldv
      241 mfgtaaseai lrwqragllg phlesihsta lsadawsamr dagvtvslap tsdtqigled
      301 avppvdeala hgihpglsvd vevalasdmf tqmrtllsvq rmravhatyg tgaepvritt
      361 sdvldfatls gartlgldgv tgsltpgkra dlivvdaedl ntmplhdpvg tlvlgaersn
      421 itsvwvagrl rkwdrrlvgv diaalrdqvh asvesiatrl agptggdhpm tprpgtlvvr
      481 dalvhitpsr ttradivvtd gtvthvgtrr lpaqpdavti aaagasavpl lvdsavharp
      541 phdrhlddla pgnraafavi rgavrenrir hmlvvsprdl lavvvgeqve arhgvptrps
      601 adpgdgwaga wtdpnrgmtq fltshgryse trggradayt grywvhedri tylddqgfwa
      661 fgqqvngilh hagyvlhrtt dgdprgggr
//
LOCUS       WP_235998905             443 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase domain-containing protein [Qaidamihabitans
            albus].
ACCESSION   WP_235998905
VERSION     WP_235998905.1
KEYWORDS    RefSeq.
SOURCE      Qaidamihabitans albus
  ORGANISM  Qaidamihabitans albus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Qaidamihabitans.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040438.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20091.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Qaidamihabitans albus"
                     /db_xref="taxon:2795733"
     Protein         1..443
                     /product="alpha/beta hydrolase domain-containing protein"
                     /calculated_mol_wt=47352
     Region          77..439
                     /region_name="Abhydrolase_10"
                     /note="Alpha/beta hydrolase domain; pfam20091"
                     /db_xref="CDD:437923"
ORIGIN      
        1 msstwrrlaa aivvsgllav spapaaaadp vpdvdgpvpg svpgdplagd vadtypffst
       61 pvdlaargyv eeefylsgaa dgwttdgvqv atdvpyttri vvrrpanpkr fngtalvewq
      121 nvtagydlda lwnadsvtra gyawigvsaq rvgvdhlrtw sparyghldv tgggahtade
      181 lsydifaqag eavamqgads pmgglevrnl laigasqsas rmtvyydnvl prtrpvfdgf
      241 gfivgsapar agaepvfqvl setdvrtarr padtdrfrrw evagaahsgy qgqvyrapis
      301 erdlggapqy dcdrppfsri pmhhvtaaay hhlarwtehg tppplaepla feadgvtkkr
      361 dalglalggi rlsqlavpta lntgdnsges fcflfgthep fdeqtlsrly pnrgsyvsav
      421 rkvdranvrs gyllpadars nrp
//
LOCUS       WP_235999092              83 aa            linear   BCT 02-MAR-2025
DEFINITION  ANTAR domain-containing protein [Qaidamihabitans albus].
ACCESSION   WP_235999092
VERSION     WP_235999092.1
KEYWORDS    RefSeq.
SOURCE      Qaidamihabitans albus
  ORGANISM  Qaidamihabitans albus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Qaidamihabitans.
REFERENCE   1  (residues 1 to 83)
  AUTHORS   Shu,C.J. and Zhulin,I.B.
  TITLE     ANTAR: an RNA-binding domain in transcription antitermination
            regulatory proteins
  JOURNAL   Trends Biochem Sci 27 (1), 3-5 (2002)
   PUBMED   11796212
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03861.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Qaidamihabitans albus"
                     /db_xref="taxon:2795733"
     Protein         1..83
                     /product="ANTAR domain-containing protein"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /calculated_mol_wt=9134
     Region          <1..50
                     /region_name="AmiR"
                     /note="Two-component response regulator, AmiR/NasT family,
                     consists of REC and RNA-binding antiterminator (ANTAR)
                     domains [Signal transduction mechanisms, Transcription];
                     COG3707"
                     /db_xref="CDD:442921"
ORIGIN      
        1 mafdnaravh dsrrlvaqlg taphtrqtig qaegllmrhl gcdrregfal vdaheqgdrp
       61 aaltrfdvpd erpvysgrws gpr
//
LOCUS       WP_235998324             438 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome c3 family protein [Hymenobacter sp. BT559].
ACCESSION   WP_235998324
VERSION     WP_235998324.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter sp. BT559
  ORGANISM  Hymenobacter sp. BT559
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 438)
  AUTHORS   Pokkuluri,P.R., Londer,Y.Y., Duke,N.E., Pessanha,M., Yang,X.,
            Orshonsky,V., Orshonsky,L., Erickson,J., Zagyanskiy,Y.,
            Salgueiro,C.A. and Schiffer,M.
  TITLE     Structure of a novel dodecaheme cytochrome c from Geobacter
            sulfurreducens reveals an extended 12 nm protein with interacting
            hemes
  JOURNAL   J Struct Biol 174 (1), 223-233 (2011)
   PUBMED   21130881
REFERENCE   2  (residues 1 to 438)
  AUTHORS   Pokkuluri,P.R., Londer,Y.Y., Yang,X., Duke,N.E., Erickson,J.,
            Orshonsky,V., Johnson,G. and Schiffer,M.
  TITLE     Structural characterization of a family of cytochromes c(7)
            involved in Fe(III) respiration by Geobacter sulfurreducens
  JOURNAL   Biochim Biophys Acta 1797 (2), 222-232 (2010)
   PUBMED   19857457
REFERENCE   3  (residues 1 to 438)
  AUTHORS   Morgado,L., Bruix,M., Orshonsky,V., Londer,Y.Y., Duke,N.E.,
            Yang,X., Pokkuluri,P.R., Schiffer,M. and Salgueiro,C.A.
  TITLE     Structural insights into the modulation of the redox properties of
            two Geobacter sulfurreducens homologous triheme cytochromes
  JOURNAL   Biochim Biophys Acta 1777 (9), 1157-1165 (2008)
   PUBMED   18534185
REFERENCE   4  (residues 1 to 438)
  AUTHORS   Rodrigues,M.L., Oliveira,T.F., Pereira,I.A. and Archer,M.
  TITLE     X-ray structure of the membrane-bound cytochrome c quinol
            dehydrogenase NrfH reveals novel haem coordination
  JOURNAL   EMBO J 25 (24), 5951-5960 (2006)
   PUBMED   17139260
REFERENCE   5  (residues 1 to 438)
  AUTHORS   Pokkuluri,P.R., Londer,Y.Y., Duke,N.E., Erickson,J., Pessanha,M.,
            Salgueiro,C.A. and Schiffer,M.
  TITLE     Structure of a novel c7-type three-heme cytochrome domain from a
            multidomain cytochrome c polymer
  JOURNAL   Protein Sci 13 (6), 1684-1692 (2004)
   PUBMED   15133162
  REMARK    Erratum:[Protein Sci. 2009 Mar;18(3):675]
REFERENCE   6  (residues 1 to 438)
  AUTHORS   Afkar,E. and Fukumori,Y.
  TITLE     Purification and characterization of triheme cytochrome c7 from the
            metal-reducing bacterium, Geobacter metallireducens
  JOURNAL   FEMS Microbiol Lett 175 (2), 205-210 (1999)
   PUBMED   10386369
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025875.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14522.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Hymenobacter sp. BT559"
                     /db_xref="taxon:2795729"
     Protein         1..438
                     /product="cytochrome c3 family protein"
                     /calculated_mol_wt=46640
     Region          61..148
                     /region_name="CytC552"
                     /note="Cytochrome c551/c552 [Energy production and
                     conversion]; COG4654"
                     /db_xref="CDD:443692"
     Region          274..395
                     /region_name="Cytochrom_C3"
                     /note="Heme-binding domain of the class III cytochrome C
                     family and related proteins; cd08168"
                     /db_xref="CDD:173979"
     Site            order(280,283,291,294..296,312,345,366,369..370,390,
                     393..394)
                     /site_type="other"
                     /note="heme-binding residues [chemical binding]"
                     /db_xref="CDD:173979"
     Region          363..>437
                     /region_name="Cytochrom_C3"
                     /note="Heme-binding domain of the class III cytochrome C
                     family and related proteins; cl23752"
                     /db_xref="CDD:474044"
ORIGIN      
        1 mmnsflsrts ywvlalflal agsataqdat saatvsqqgv tpggtagaap atgggdaaai
       61 qagdalfkan ctqchavnek vvgpalagit krrqipwlik wvknpakvia sgdeyavklf
      121 ndygkqqmps falsdkeits imawvdsqga gpvagptken aakvdgaggd tadaggagag
      181 kyadvllivl vvvlivlvvt lviianlmkd vlrgrkdldg rdveileqrf dwaglyksta
      241 lrgivgavva lallyagvqs vmavgltqgy qptqpiafsh klhagennin caychtsvyk
      301 gksanipsan icmnchsqik tespeikkiy raierkqpiq wvrvhnlpdl ayfnhsqhtq
      361 vggiqcqtch gpiqnmevvy qysaltmgwc inchretpln tkgnayydnl vklhdksnna
      421 vpftvssngg tecskchy
//
LOCUS       WP_235999353             311 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Qaidamihabitans albus].
ACCESSION   WP_235999353
VERSION     WP_235999353.1
KEYWORDS    RefSeq.
SOURCE      Qaidamihabitans albus
  ORGANISM  Qaidamihabitans albus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Qaidamihabitans.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024871.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13480.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Qaidamihabitans albus"
                     /db_xref="taxon:2795733"
     Protein         1..311
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /calculated_mol_wt=32569
     Region          47..302
                     /region_name="COG3375"
                     /note="Predicted acetyltransferase, GNAT superfamily
                     [General function prediction only]"
                     /db_xref="CDD:442602"
ORIGIN      
        1 mseirqlagt sglhdqpgvl latpleveaa vlaaeaaara agvrvreltd ladleqvyrl
       61 ydgiwhpdpk nppvttellr altkggnyva gayegnrllg acvgffgaps dgvmhshiag
      121 vspvvagrsv gfalklhqra walrrgvasi gwtfdplvgr nayfnltkla avpaeyltnf
      181 yggvndging tddtdrllvr wglgsarvaa acsgtpvpcd aeaervagav vglgrsadgl
      241 pvagtthght vlvavprdie rlrttdpdta rrwrvavrqv lgnllaeggr vtgfdragwy
      301 vvgttasged s
//
LOCUS       WP_235999376             212 aa            linear   BCT 02-MAR-2025
DEFINITION  putative metallopeptidase [Bradyrhizobium uaiense].
ACCESSION   WP_235999376
VERSION     WP_235999376.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039181.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18894.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         1..212
                     /product="putative metallopeptidase"
                     /EC_number="3.4.24.-"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=22723
     Region          37..193
                     /region_name="PhageMetallopep"
                     /note="Putative phage metallopeptidase; pfam18894"
                     /db_xref="CDD:465902"
ORIGIN      
        1 mtlpatiser rprppadlae gagtaipfwp apdfaawifd tfinegaple naehahlrea
       61 sigvlwtgve nskrqrtivg raelgetigg sdpwskgrav qqlegwfglv pdfiltfsap
      121 yadqaddatf calvehelsh caqerdaygm pkfrkfgaps fcmrghdiee fvgvvaryga
      181 dasgvralvd aanagptiaa aditfacgnc qr
//
LOCUS       WP_235999452             323 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Bradyrhizobium
            uaiense].
ACCESSION   WP_235999452
VERSION     WP_235999452.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         1..323
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=35785
     Region          <107..308
                     /region_name="PRK10130"
                     /note="HTH-type transcriptional regulator EutR"
                     /db_xref="CDD:182258"
ORIGIN      
        1 mtapllvprv frfddvdafr ssirnldvdf tplarkisae qiilslpgcd lnytqsfpri
       61 vdaqlaphtt avgftmddgv pmrfngaerd rdvivlgggg afytsveetp rqyasviftp
      121 eivdrgwpnp glhfsiheis qraqdrlrev vrqvllvtse qvtiaefatg asiketllaa
      181 idnafaeivp akwatrantt rqfkvfndar ailagdvahp iysgelarqi gvsvralhda
      241 ilryrgvslh rylrlrrlwl vrrqllagap svkacalayg fwhlsdfsrs yrsqfgeaps
      301 etlaaarrpg vpradpsssr hes
//
LOCUS       WP_235999483             560 aa            linear   BCT 02-MAR-2025
DEFINITION  C69 family dipeptidase [Qaidamihabitans albus].
ACCESSION   WP_235999483
VERSION     WP_235999483.1
KEYWORDS    RefSeq.
SOURCE      Qaidamihabitans albus
  ORGANISM  Qaidamihabitans albus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Qaidamihabitans.
REFERENCE   1  (residues 1 to 560)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     Peptidase family U34 belongs to the superfamily of N-terminal
            nucleophile hydrolases
  JOURNAL   Protein Sci 12 (5), 1131-1135 (2003)
   PUBMED   12717035
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015536.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03577.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Qaidamihabitans albus"
                     /db_xref="taxon:2795733"
     Protein         1..560
                     /product="C69 family dipeptidase"
                     /EC_number="3.4.13.-"
                     /GO_function="GO:0016805 - dipeptidase activity [Evidence
                     IEA]"
                     /GO_function="GO:0070004 - cysteine-type exopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=61959
     Region          39..487
                     /region_name="PepD"
                     /note="Dipeptidase [Amino acid transport and metabolism];
                     cl41909"
                     /db_xref="CDD:477862"
ORIGIN      
        1 maalllllpa gaastartta ehagapvaqg qeeltksigf yvgrnltedg stllggfghe
       61 psshwleivp rrhfpegatt tvgvteeagf pgvlteipqa rrtsryitsn ysefagfpap
      121 ltngglnehg vaardvwsps sdrllqltek pqtgpnysdl ariamerart areaveiiga
      181 lidehgysty ggnshlfade negwvfvnyg gsqnlwaaer lgpdevrvsf pgylnpfpld
      241 yenrpgeyla sdnfvdfave rgwfapegkd vfdpqavyag wqpddrqvtp thpwgnnvqs
      301 eleselrtel gpvsladlla yvrdprwshd rsgyghvaql gnagrpelna lwtavtgava
      361 tpyvpvyiga edvppeykqh ryltsdaass hvaadyaple atryatrtfk rlmyhtcehp
      421 rtflrpvtae iekfeqrllr eqprverqal rwfraghddk aralltgqve rrlldaldlg
      481 edlarevedr trerfgirmp tgrnlpgety raesqsmnrg eglsgpandi vhcyregidd
      541 yprehgsyrg lagtllpkgg
//
LOCUS       WP_235999507             136 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1844 domain-containing protein [Qaidamihabitans albus].
ACCESSION   WP_235999507
VERSION     WP_235999507.1
KEYWORDS    RefSeq.
SOURCE      Qaidamihabitans albus
  ORGANISM  Qaidamihabitans albus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Qaidamihabitans.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020473.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08899.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Qaidamihabitans albus"
                     /db_xref="taxon:2795733"
     Protein         1..136
                     /product="DUF1844 domain-containing protein"
                     /calculated_mol_wt=14357
     Region          44..115
                     /region_name="DUF1844"
                     /note="Domain of unknown function (DUF1844); pfam08899"
                     /db_xref="CDD:430299"
ORIGIN      
        1 mrppnirglv argrvpdvvd nvsqqpddsp evrelhdips vevisraavm llsaaaerlg
       61 ladddpessp rrdldearrl italaglvta sgeylglhag plrdglqslq kafreasavp
      121 dapgqgpgek ytgpvy
//
LOCUS       WP_235999518             238 aa            linear   BCT 02-MAR-2025
DEFINITION  LysM peptidoglycan-binding domain-containing protein [Heyndrickxia
            sporothermodurans].
ACCESSION   WP_235999518
VERSION     WP_235999518.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia sporothermodurans
  ORGANISM  Heyndrickxia sporothermodurans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
REFERENCE   1  (residues 1 to 238)
  AUTHORS   Bateman,A. and Bycroft,M.
  TITLE     The structure of a LysM domain from E. coli membrane-bound lytic
            murein transglycosylase D (MltD)
  JOURNAL   J Mol Biol 299 (4), 1113-1119 (2000)
   PUBMED   10843862
REFERENCE   2  (residues 1 to 238)
  AUTHORS   Joris,B., Englebert,S., Chu,C.P., Kariyama,R., Daneo-Moore,L.,
            Shockman,G.D. and Ghuysen,J.M.
  TITLE     Modular design of the Enterococcus hirae muramidase-2 and
            Streptococcus faecalis autolysin
  JOURNAL   FEMS Microbiol Lett 70 (3), 257-264 (1992)
   PUBMED   1352512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01476.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Heyndrickxia sporothermodurans"
                     /db_xref="taxon:46224"
     Protein         1..238
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=26792
     Region          <13..85
                     /region_name="GH25_muramidase"
                     /note="Endo-N-acetylmuramidases (muramidases) are
                     lysozymes (also referred to as peptidoglycan hydrolases)
                     that degrade bacterial cell walls by catalyzing the
                     hydrolysis of 1,4-beta-linkages between N-acetylmuramic
                     acid and N-acetyl-D-glucosamine residues; cl10448"
                     /db_xref="CDD:447900"
     Region          102..238
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
ORIGIN      
        1 mqkhhkllst yvlkdvgykt gfyvshelyk kydldkvkad flwlprygkd ngkpdknpdy
       61 pcclwqysqy ckvdwykggl dfnllngdks lewftgkkkt tpvnkpkkkt eskpvskpkd
      121 ekytvvktln ayinaadaka rknvkgtvsa gtyhvfnkan gminvtpikg vagswinpad
      181 nkksatsttk akyhvvgkge vlskiaakyn tsvsailkln knikdknliy anqkirvk
//
LOCUS       WP_235999540             398 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Bradyrhizobium uaiense].
ACCESSION   WP_235999540
VERSION     WP_235999540.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13458.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         1..398
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=41838
     Region          35..385
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 maisrrdvll gsagalgaas fsfpapaiaq sepikigcla aitgpssapt vgfnrgvnfa
       61 vdaingaggv kgrkielvmr dtqgdptkav natqelisqa kvhaiwgpln sgealattpi
      121 marakmpdlh pcvvetlidp vkfpnafria psnnqwddav rnyclkilkv kkvavigdtt
      181 gygvtavgas vaafkkdgae vvyqanvdat qpdmtpdmlr aknagaeaiv vwsvstgmea
      241 rmfntraams wdvpfvghps lasgelaslv akpenwkkvy aigykscsyd gagklpaksa
      301 dlvvrltkan ialndtllww iaggidciel iakaigesgs tdsagiinyw nslstypgyf
      361 gnyrfsptqh ngylteeivm seastakdgt falapgyt
//
LOCUS       WP_235999650             161 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Bradyrhizobium uaiense].
ACCESSION   WP_235999650
VERSION     WP_235999650.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024824.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13432.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         1..161
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=17383
     Region          49..>137
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          65..91
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(67..68,71..72,74,98,101..102,105..106,108..109,132,
                     135..136,139..140,143)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          96..126
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mltivmltgc aspsdlsrqq wstsdlaggk efdpamheri sralvhadeq slratldqqp
       61 dnvsaaisla rallarnssd ealqvlnevl laapgdlral nakgvvldqq grheeaqvly
      121 rqglaieptn smlrnnlels aalegktdir nfnqelqpgd e
//
LOCUS       WP_235999886             293 aa            linear   BCT 02-MAR-2025
DEFINITION  pirin family protein [Bradyrhizobium uaiense].
ACCESSION   WP_235999886
VERSION     WP_235999886.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 293)
  AUTHORS   Pang,H., Bartlam,M., Zeng,Q., Miyatake,H., Hisano,T., Miki,K.,
            Wong,L.L., Gao,G.F. and Rao,Z.
  TITLE     Crystal structure of human pirin: an iron-binding nuclear protein
            and transcription cofactor
  JOURNAL   J Biol Chem 279 (2), 1491-1498 (2004)
   PUBMED   14573596
REFERENCE   2  (residues 1 to 293)
  AUTHORS   Orzaez,D., de Jong,A.J. and Woltering,E.J.
  TITLE     A tomato homologue of the human protein PIRIN is induced during
            programmed cell death
  JOURNAL   Plant Mol Biol 46 (4), 459-468 (2001)
   PUBMED   11485202
REFERENCE   3  (residues 1 to 293)
  AUTHORS   Dechend,R., Hirano,F., Lehmann,K., Heissmeyer,V., Ansieau,S.,
            Wulczyn,F.G., Scheidereit,C. and Leutz,A.
  TITLE     The Bcl-3 oncoprotein acts as a bridging factor between
            NF-kappaB/Rel and nuclear co-regulators
  JOURNAL   Oncogene 18 (22), 3316-3323 (1999)
   PUBMED   10362352
REFERENCE   4  (residues 1 to 293)
  AUTHORS   Wendler,W.M., Kremmer,E., Forster,R. and Winnacker,E.L.
  TITLE     Identification of pirin, a novel highly conserved nuclear protein
  JOURNAL   J Biol Chem 272 (13), 8482-8489 (1997)
   PUBMED   9079676
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014708.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02678.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         1..293
                     /product="pirin family protein"
                     /calculated_mol_wt=31891
     Region          <82..259
                     /region_name="YhaK"
                     /note="Redox-sensitive bicupin YhaK, pirin superfamily
                     [General function prediction only]; COG1741"
                     /db_xref="CDD:441347"
ORIGIN      
        1 mrlpsrfsqt cswsgsddkr tgggivlsvv lsglkaelra pkviseyvrt ylderkrrfg
       61 klcrqeikrp dvlafmrsye aegkletrte gnlrfdmgdw gtglldyggv ewmragsgiw
      121 hggeyrpaga srfkgfqlwv alpaaqeasa pewqfieasg iptvgparli vgayqgkasp
      181 vrafnglnyl lvtlapgetw vyetpvghev gwlslshgsl lgdgrykagd miafdrsdaa
      241 islqsgpega tfvlgsavph pydlvlgyys vhtsdealka geariadvrh lya
//
LOCUS       WP_235999895             486 aa            linear   BCT 02-MAR-2025
DEFINITION  Rieske 2Fe-2S domain-containing protein [Bradyrhizobium uaiense].
ACCESSION   WP_235999895
VERSION     WP_235999895.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 486)
  AUTHORS   Botelho,H.M., Leal,S.S., Veith,A., Prosinecki,V., Bauer,C.,
            Frohlich,R., Kletzin,A. and Gomes,C.M.
  TITLE     Role of a novel disulfide bridge within the all-beta fold of
            soluble Rieske proteins
  JOURNAL   J Biol Inorg Chem 15 (2), 271-281 (2010)
   PUBMED   19862563
REFERENCE   2  (residues 1 to 486)
  AUTHORS   Iwata,S., Saynovits,M., Link,T.A. and Michel,H.
  TITLE     Structure of a water soluble fragment of the 'Rieske' iron-sulfur
            protein of the bovine heart mitochondrial cytochrome bc1 complex
            determined by MAD phasing at 1.5 A resolution
  JOURNAL   Structure 4 (5), 567-579 (1996)
   PUBMED   8736555
REFERENCE   3  (residues 1 to 486)
  AUTHORS   Brandt,U., Yu,L., Yu,C.A. and Trumpower,B.L.
  TITLE     The mitochondrial targeting presequence of the Rieske iron-sulfur
            protein is processed in a single step after insertion into the
            cytochrome bc1 complex in mammals and retained as a subunit in the
            complex
  JOURNAL   J Biol Chem 268 (12), 8387-8390 (1993)
   PUBMED   8386158
REFERENCE   4  (residues 1 to 486)
  AUTHORS   Huang,J.T., Struck,F., Matzinger,D.F. and Levings,C.S. 3rd.
  TITLE     Functional analysis in yeast of cDNA coding for the mitochondrial
            Rieske iron-sulfur protein of higher plants
  JOURNAL   Proc Natl Acad Sci U S A 88 (23), 10716-10720 (1991)
   PUBMED   1961737
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012575.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00355.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         1..486
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /GO_function="GO:0051537 - 2 iron, 2 sulfur cluster
                     binding [Evidence IEA]"
                     /calculated_mol_wt=54499
     Region          46..190
                     /region_name="Rieske_RO_Alpha_PhDO_like"
                     /note="Rieske non-heme iron oxygenase (RO) family,
                     Phthalate 4,5-dioxygenase (PhDO)-like subfamily,
                     N-terminal Rieske domain of the oxygenase alpha subunit;
                     composed of the oxygenase alpha subunits of PhDO and
                     similar proteins including 3-chlorobenzoate 3; cd03479"
                     /db_xref="CDD:239561"
     Region          49..438
                     /region_name="PobA"
                     /note="Chlorophyllide a oxygenase/letal leaf spot protein
                     [Coenzyme transport and metabolism]; COG5749"
                     /db_xref="CDD:444459"
ORIGIN      
        1 mqeiaanppv rrtalpaial tsriryaklr enqeqprgna mlraednkfl tesgagtgmg
       61 ellrrfwipv llseelpepd gdpkkiivmg eellafrdsr gvvgvidqyc phrganlwlg
      121 rneecgircv yhgwkfdidg rcvdmptsyp dlnakdliri ksypvrewge miwaymgpad
      181 qmpelpalem allpashrfv tkkwqdcnwv qavegsidta hftfahlsfd keeneildik
      241 khfvnpltrv atdhmrwiae dprpvikinp heagltvagg rltgsdniyw riaqflmpfh
      301 syapssmpge nmfgqtfvpv tdtncwiyty awnphrpltd aerdgyangn gvmavvdeny
      361 vplrnkandy lidrklqrtn sytgikgvse qdaavqdsqg piadrtrehl gptdlgimhf
      421 rklvmeaala lqkgeappha qhqdrytvrs gacvtsktkd ltavmierfg dpvgfvgrpg
      481 anaaae
//
LOCUS       WP_235999908             413 aa            linear   BCT 02-MAR-2025
DEFINITION  YbfB/YjiJ family MFS transporter [Bradyrhizobium uaiense].
ACCESSION   WP_235999908
VERSION     WP_235999908.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018485.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06779.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         1..413
                     /product="YbfB/YjiJ family MFS transporter"
                     /calculated_mol_wt=42280
     Region          36..402
                     /region_name="MFS_4"
                     /note="Uncharacterized MFS-type transporter YbfB;
                     pfam06779"
                     /db_xref="CDD:399632"
ORIGIN      
        1 msmsanvdhd rrhhakphrd aagplwlsat aglcaslvgl glarfaytpl ipaliaakwf
       61 tpaeavylga anlagylaga liardlgari gsvwalrgmm llaavtcfac avpisfiwff
      121 gfrflagisg gvimvlaata ilphtapskr gliggvifag vglgvaasgt lvplllqqgv
      181 kqawyglgvl svvltliswk awpvdvpath gaaephvash gvrsplvial cleyglnala
      241 lvphmvflvd yvarglgqgi aagshywvly gigavvgpll aghladragf aaalraafpi
      301 eavavalpav tnspaalivs slivggftpg ivplvigrih eliphsaasq rstwaqattt
      361 falfqaagay glsylfaqsg gnyallfvig aagvaialti elfsvvalgr kps
//
LOCUS       WP_235999983             291 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Bradyrhizobium uaiense].
ACCESSION   WP_235999983
VERSION     WP_235999983.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 291)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         1..291
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=33238
     Region          14..268
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Site            order(17,19,45,72..73,186,247)
                     /site_type="active"
                     /db_xref="CDD:277317"
     Site            order(17,19,45,72,186,247)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277317"
ORIGIN      
        1 msqyrgptkm rlwilsdlhv eltrgwdlps gdarpnfdvl vvagdlvprm ergvrwller
       61 vpdkpvvyvp gnhefygtdi drtvekamea aegtkvfvlq drwiklggvi fagatlwtdf
      121 alfgdehram tvaadqmndy rkirvgryve rfrpphallr hrksrtfleg elrkprgtgr
      181 lvvithhapm pswgnlvapp ytgaeltddd vlaaayrsdl tslmwpalim dgqsyrrrpa
      241 dlwiyghthe tedltightr ivsnakgygp wlpkyhawdn qrfdpnlive v
//
LOCUS       WP_236000042             331 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Bradyrhizobium uaiense].
ACCESSION   WP_236000042
VERSION     WP_236000042.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 331)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 331)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         1..331
                     /product="VOC family protein"
                     /calculated_mol_wt=36494
     Region          3..280
                     /region_name="23dbph12diox"
                     /note="2,3-dihydroxybiphenyl 1,2-dioxygenase; TIGR03213"
                     /db_xref="CDD:132257"
ORIGIN      
        1 mailglgyag fgsdalddwr qfgtglvglq aiehgnslla frmddrkqri vidraqgesv
       61 rffgwevada valdalaarl eragvavtae pqtladarrv rglisfrdpa gnrleafhga
      121 eiddtpfrpg rsisgfrtgp lglghavltv enlvpvmsfy vdvlgfalsd yiekpfrayf
      181 fhvnarhhsl alietgsngm hhlmvelfsl ddvgqaydia qqedrinvtl grhtndlmts
      241 fyakspsafm vecgwggrei dpanwtpfem hdgpslwghe rvwlsaedra iaremrmraa
      301 aegkrapvqv megnfklmag tcpwwdgvrg s
//
LOCUS       WP_236000067             151 aa            linear   BCT 02-MAR-2025
DEFINITION  cation-transporting P-type ATPase [Bradyrhizobium uaiense].
ACCESSION   WP_236000067
VERSION     WP_236000067.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012893.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00690.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         1..151
                     /product="cation-transporting P-type ATPase"
                     /calculated_mol_wt=16095
     Region          27..>131
                     /region_name="MgtA"
                     /note="Magnesium-transporting ATPase (P-type) [Inorganic
                     ion transport and metabolism]; COG0474"
                     /db_xref="CDD:440242"
ORIGIN      
        1 mnffskptkq tyslvdeeve gacdgmlaai srlqpheaca rmgstpegli daeaaarikk
       61 fgpnlvarer kptipeeiwn rarnplngll ltlaavsyfl gdaraaivia tmvvlaitta
      121 figapvqrgr spaachgshh recqaqartv g
//
LOCUS       WP_236000149              64 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Bradyrhizobium uaiense].
ACCESSION   WP_236000149
VERSION     WP_236000149.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024736.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13340.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..64
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         1..>64
                     /product="transposase"
     Region          2..>64
                     /region_name="transpos_IS5_3"
                     /note="IS5 family transposase; NF033580"
                     /db_xref="CDD:468097"
ORIGIN      
        1 mdrlvlsdaa wkrmapliig rpdqkgstgr dnrmfvegvl wivrtgspwr dlpevfgdwn
       61 svfr
//
LOCUS       WP_236000179             102 aa            linear   BCT 02-MAR-2025
DEFINITION  LLM class flavin-dependent oxidoreductase [Bradyrhizobium uaiense].
ACCESSION   WP_236000179
VERSION     WP_236000179.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012517.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00296.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         1..102
                     /product="LLM class flavin-dependent oxidoreductase"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /calculated_mol_wt=11698
     Region          2..>102
                     /region_name="Flavin_utilizing_monoxygenases"
                     /note="Flavin-utilizing monoxygenases; cl19096"
                     /db_xref="CDD:450250"
ORIGIN      
        1 mqqeaitcta vlsaqtkrlk linaihtgfw hpamiakvga tidvyskgrf ainiltgwfk
       61 ddfrafgepw lehderyrcs eefiqvlkgl wtqdrfafkg df
//
LOCUS       WP_236000298             261 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Bradyrhizobium
            uaiense].
ACCESSION   WP_236000298
VERSION     WP_236000298.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         1..>261
                     /product="ABC transporter substrate-binding protein"
     Region          40..>253
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mfpisrwkrh tlavalsala lsfaphelsf apqamaadkt itavmhsdlr vidpilttay
       61 itrdhgymvy dtlvatdsnf kiqpqmadwk vsddkltytf tlrdglkwhd gtpvtaedcv
      121 aslkrwakvd gmgqklmdft asleatdakt itlklkepyg lvldsigkps srvafmmpkr
      181 laetppdkpi peqigsgpfk fvqaefqpgv kavyvknkdy vprkepaswt aggkvvkvdr
      241 vewvtmadaq irmhhrsdgl i
//
LOCUS       WP_236000055              91 aa            linear   BCT 02-MAR-2025
DEFINITION  OsmC family protein [Bradyrhizobium uaiense].
ACCESSION   WP_236000055
VERSION     WP_236000055.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 91)
  AUTHORS   Mongkolsuk,S., Praituan,W., Loprasert,S., Fuangthong,M. and
            Chamnongpol,S.
  TITLE     Identification and characterization of a new organic hydroperoxide
            resistance (ohr) gene with a novel pattern of oxidative stress
            regulation from Xanthomonas campestris pv. phaseoli
  JOURNAL   J Bacteriol 180 (10), 2636-2643 (1998)
   PUBMED   9573147
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014608.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02566.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         1..91
                     /product="OsmC family protein"
                     /calculated_mol_wt=9811
     Region          <1..81
                     /region_name="PRK10738"
                     /note="OsmC family protein; cl00767"
                     /db_xref="CDD:469912"
ORIGIN      
        1 mlaagfaacf hgalnliask gkisiressv qvsvtfgrdp sdglfllkvd tevtlpgvdr
       61 tiaqeliret ervcpyakml rkgcentvwl t
//
LOCUS       WP_236000475             316 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Bradyrhizobium
            uaiense].
ACCESSION   WP_236000475
VERSION     WP_236000475.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 316)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         1..316
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=35486
     Region          7..283
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(106..107,109..110,113,117,119..125,217..222,
                     228..229,231..232)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176102"
ORIGIN      
        1 msivfsqlra fhavaahggf taasrvlnvg qptltiqvke leesygvell irkprhtelt
       61 eagaalfeit rgimtfcdea hellaahgka tkghlrvatv gpfhateiia afkrdhpevq
      121 istllgnser tfrhivdfea dvailaevpe dprvtmipyr thrvivfvnr dhpwfkrksv
      181 rlreladqpi vlrergsttr rafeatmqde giriepvfei esregvwkav erglgisvva
      241 dfefvphpnl raleisdrti ktqysiahhs grghspiika fietvrrmkg gdtiakrlsr
      301 fsmrtaprvq pnskpm
//
LOCUS       WP_236000490             367 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Bradyrhizobium uaiense].
ACCESSION   WP_236000490
VERSION     WP_236000490.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 367)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         1..367
                     /product="AMP-binding protein"
                     /calculated_mol_wt=39060
     Region          <20..367
                     /region_name="PRK07529"
                     /note="AMP-binding domain protein; Validated"
                     /db_xref="CDD:236043"
ORIGIN      
        1 mttrcrsaaa arfparayrl aagttmvipg pagardpalv rhfwqiiety riniagnvpt
       61 ilgaladvpv gesdistlrv tatgasicpp eierrylatw ggaciqqlyg mtelagaith
      121 dvhgvkprae svgtrnplve lailegnklh tgpwpspvge lltrgpqvfa gyvdkkqtde
      181 afrdgwlrtg dicridadgf vyilgrakdv iirgghnidp raiedaalaf pgvalaaavg
      241 rpdtyagevp mlfvsaqpga hidpnalaaf vqdnileppa rprvvsviae mpvtpvgkif
      301 kpklreiaag eaarellale glsgevsvda itdpsrglyl svkappdkae taerllkkfp
      361 vkvelrp
//
LOCUS       WP_236000499             222 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Lacticaseibacillus suilingensis].
ACCESSION   WP_236000499
VERSION     WP_236000499.1
KEYWORDS    RefSeq.
SOURCE      Lacticaseibacillus suilingensis
  ORGANISM  Lacticaseibacillus suilingensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024824.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13432.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Lacticaseibacillus suilingensis"
                     /db_xref="taxon:2799577"
     Protein         1..222
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=24055
     Region          3..>137
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          32..62
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          67..95
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          102..130
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mneqamikqf nqgdhdaair qavqriddkp tdpkryavla tmliglhafd easqllvral
       61 glfpnhpelt ydagllafsq enfdlaskyf kqlaqgqgsl qtdaqymlal seqhagrtqk
      121 alayaltahe aapekvdaal laaqlllgfg afkdasrllk pflkmkdagv lftygmaqtg
      181 agidgqkwld eakaidpkgy qskvgqvrdi agflkaqgqa de
//
LOCUS       WP_236000511             474 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein [Lacticaseibacillus
            suilingensis].
ACCESSION   WP_236000511
VERSION     WP_236000511.1
KEYWORDS    RefSeq.
SOURCE      Lacticaseibacillus suilingensis
  ORGANISM  Lacticaseibacillus suilingensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (residues 1 to 474)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Lacticaseibacillus suilingensis"
                     /db_xref="taxon:2799577"
     Protein         1..474
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=49380
     Region          8..>455
                     /region_name="PRK13805"
                     /note="bifunctional acetaldehyde-CoA/alcohol
                     dehydrogenase; Provisional"
                     /db_xref="CDD:237515"
ORIGIN      
        1 maqvtvlkqp vaaadpaaev dalvnqaeha fnlyqnftqa qvdhithavv aaarahakdl
       61 aflawketgr gnaedkaikn iyasqyiwna ikttktvgki sedpangltq yaeplgilag
      121 itpvtnptst vifkailalk trnaiifglh pqaqqcgsaa vkimedaata agapagliqc
      181 iahpsieass almnhdrval vlatggpgmv kaaystgkpa lgvgpgnapa yiektadiaa
      241 avqdillsks fdnsmicase nsivvdrsiy pavkaafqag gayfvpdqev akltaavidp
      301 qrrtvrgpva gqsaekiakl agltvpkgtk lliakldgig knfllsgekl cpvlslylan
      361 dhasafdlcq sllhygglgh taaihttdqt vidafgeamp acrilvnspa slggigglfn
      421 rltpsltlgt gsygknsish nltvmdllni ktvaratrhp naligelrdl ihen
//
LOCUS       WP_236000521             806 aa            linear   BCT 02-MAR-2025
DEFINITION  tape measure protein [Lacticaseibacillus suilingensis].
ACCESSION   WP_236000521
VERSION     WP_236000521.1
KEYWORDS    RefSeq.
SOURCE      Lacticaseibacillus suilingensis
  ORGANISM  Lacticaseibacillus suilingensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040129.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20155.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..806
                     /organism="Lacticaseibacillus suilingensis"
                     /db_xref="taxon:2799577"
     Protein         1..806
                     /product="tape measure protein"
                     /calculated_mol_wt=82795
     Region          48..719
                     /region_name="COG5412"
                     /note="Phage-related protein [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:444167"
     Region          76..267
                     /region_name="TMP_3"
                     /note="Tape measure protein; pfam20155"
                     /db_xref="CDD:466312"
ORIGIN      
        1 maadgtvvid ikadggneav gtmdklksam kgliapgesa gkvfgglkdk lslgavmgla
       61 qkgiesligg lgnlgsqiid asdaidkfks tmdfagftkk qtseatksak vyadktvydl
      121 ntvlnttaql aangvknytg ltqaagnlna vaggnadtfk svamvltqta gagklttenw
      181 nqltdaipga sgklqeamkk ngaytgnfrd amekgqisad efnkaieqlg mtkaakdaat
      241 stqtfegaig nlqaafvtag tdflnkfkap itqgitdian avpkiatgls galsgigsla
      301 skanlgpkiv sqfqniqwds illpfqstwk tiqdtashld lsgvntalss lgsqfssyat
      361 nwskvwapvg sglvtalgna snaiqpffns fanldfsalf apvqgiatti kttlsgldfs
      421 giqalagqii paitagfqsf mavagpains vvtafgnlwn aaqpvvstia svlvpvfqvl
      481 gaylggvfss vlsgvstafn vvaavlrfiq plldflaagf ralspaitvv agwigklsgv
      541 fsnfggtaqs lkaaisnawn giksaiqtag egvravvsiv ssvfkslgsa gsglksalsa
      601 awsgivgavr takatisgvi gaiksiftgl ghidlgkagr aimdgfvggl kavwekgkkf
      661 vggiadwikk hkgpiqydar llvpaghaim eglnnglqks fvavkntvgs magqlsdaam
      721 vtatvglssa vqpevlagsr ytaipssqii nnystttnvg etqpqvievh vsanidkrel
      781 sreiaepvki eidrmqrtsn rrkgvi
//
LOCUS       WP_236000563             292 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Bradyrhizobium uaiense].
ACCESSION   WP_236000563
VERSION     WP_236000563.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 292)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         1..>292
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          35..>97
                     /region_name="PRK11074"
                     /note="putative DNA-binding transcriptional regulator;
                     Provisional"
                     /db_xref="CDD:182948"
     Region          94..274
                     /region_name="PBP2_BudR"
                     /note="The C-terminal substrate binding domain of
                     LysR-type transcrptional regulator BudR, which is
                     responsible for activation of the expression of the
                     butanediol operon genes; contains the type 2 periplasmic
                     binding fold; cd08451"
                     /db_xref="CDD:176142"
     Site            order(99,107,110..111,113..114,117,125,127,129,174,
                     211..212,231..232,238..239,241..242,260)
                     /site_type="other"
                     /note="putative dimerization interface [polypeptide
                     binding]"
                     /db_xref="CDD:176142"
     Site            order(100,150,201..202,209)
                     /site_type="other"
                     /note="putative substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:176142"
ORIGIN      
        1 mdrsddraap sslcrrgrrg traaarlgiq qpplsqqira leaaigaplf rrqprgvelt
       61 aagrafvdra railrdtdla veaarrasrg qegqlaigft ssaafhpfvt gvmremrera
      121 paitlsleea stgelieave adrldaafvr spserlenlt ithlldeeml valpdhhsra
      181 rkdtrrrisl asladeplil yrrptgpgly dsiiaacraa gfspkvaqea trmvstlslv
      241 aaglgisivp esmarretag vsylrldraa plararkkgp aggtrgrlpa hv
//
LOCUS       WP_236000566             191 aa            linear   BCT 02-MAR-2025
DEFINITION  ECF transporter S component [Lacticaseibacillus suilingensis].
ACCESSION   WP_236000566
VERSION     WP_236000566.1
KEYWORDS    RefSeq.
SOURCE      Lacticaseibacillus suilingensis
  ORGANISM  Lacticaseibacillus suilingensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (residues 1 to 191)
  AUTHORS   Iyer,L.M., Zhang,D., Rogozin,I.B. and Aravind,L.
  TITLE     Evolution of the deaminase fold and multiple origins of eukaryotic
            editing and mutagenic nucleic acid deaminases from bacterial toxin
            systems
  JOURNAL   Nucleic Acids Res 39 (22), 9473-9497 (2011)
   PUBMED   21890906
REFERENCE   2  (residues 1 to 191)
  AUTHORS   Rodionov,D.A., Hebbeln,P., Eudes,A., ter Beek,J., Rodionova,I.A.,
            Erkens,G.B., Slotboom,D.J., Gelfand,M.S., Osterman,A.L.,
            Hanson,A.D. and Eitinger,T.
  TITLE     A novel class of modular transporters for vitamins in prokaryotes
  JOURNAL   J Bacteriol 191 (1), 42-51 (2009)
   PUBMED   18931129
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024231.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12822.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Lacticaseibacillus suilingensis"
                     /db_xref="taxon:2799577"
     Protein         1..191
                     /product="ECF transporter S component"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /calculated_mol_wt=19523
     Region          1..184
                     /region_name="COG4684"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:443720"
ORIGIN      
        1 mgifgaliil qayipmvgyi rifpawpais tihltvilgg vllgipggag lgllwgvisl
       61 ikaytsatdp mtlllfqnpv iaivprvmvg ivaaavfnli apkvktglga tvklvaagil
      121 galtntglvi vftwiffasr atqvvagads anlglllmaa fginaiaeaa magivtpilg
      181 rvllavqarr r
//
LOCUS       WP_236000587             496 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Bradyrhizobium
            uaiense].
ACCESSION   WP_236000587
VERSION     WP_236000587.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 496)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         <1..>496
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <2..100
                     /region_name="PRK12316"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237054"
     Region          124..490
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation (C) domain of non-ribosomal
                     peptide synthetases(NRPSs) and similar domains including
                     the C-domain of SgcC5, a free-standing NRPS with both
                     ester- and amide- bond forming activity; cd19531"
                     /db_xref="CDD:380454"
ORIGIN      
        1 alpltpngkl drnalpapad eayalaayea pqgaveiala riwaellgve risrhdhffe
       61 lgghsllavq vssrlsqavg ielplstlfa rpvltdlaas ivellsrsgp qqlpsiaavs
      121 rheplvlsfa qqrlwflaql nvgstnyhip lalrlrgvld grawqrsldr lfarhealrs
      181 vfvatqgkpr vevlppdagl pvlehdlrhr adaeaalldl cqeeartpfd largplirgh
      241 lvrmsndehv flltqhhivs dgwsmgvllr elsqlyrafe agqddplpal aiqypdyaaw
      301 qrqwlsgerl qkqaqywrsa lagttrlvlp tdrarpaqqs faaatvpivi dadltgklkr
      361 lslqhgttlf mtvltawaav lsrlsgqddl vigvpsanrg qreieeligf fvntlalrld
      421 lsgepsvsel lertrrtvla aqehqdlpfe qvveivqppr aldhtpllqv mlawenngvg
      481 sldlpglnie aaseei
//
LOCUS       WP_236000606             160 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Bradyrhizobium uaiense].
ACCESSION   WP_236000606
VERSION     WP_236000606.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 160)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         1..>160
                     /product="AMP-binding protein"
     Region          <1..>160
                     /region_name="EntF"
                     /note="seryl-AMP synthase component of non-ribosomal
                     peptide synthetase [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG1020"
                     /db_xref="CDD:440643"
ORIGIN      
        1 mlawenngvg sldlpglnie aaseeidqik fdlelslgeh geeiagtlgy atalfdqati
       61 erqrgyllal lramaadadq vvgridilpv dersylleel nrtaasypse rcihelfeaq
      121 vqkapeaval vcederlsyg elnaqanrla hhlialgvkp
//
LOCUS       WP_236000588             205 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Lacticaseibacillus suilingensis].
ACCESSION   WP_236000588
VERSION     WP_236000588.1
KEYWORDS    RefSeq.
SOURCE      Lacticaseibacillus suilingensis
  ORGANISM  Lacticaseibacillus suilingensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (residues 1 to 205)
  AUTHORS   Vertes,A.A., Inui,M., Kobayashi,M., Kurusu,Y. and Yukawa,H.
  TITLE     Isolation and characterization of IS31831, a transposable element
            from Corynebacterium glutamicum
  JOURNAL   Mol Microbiol 11 (4), 739-746 (1994)
   PUBMED   8196545
REFERENCE   2  (residues 1 to 205)
  AUTHORS   van der Zee,A., Agterberg,C., van Agterveld,M., Peeters,M. and
            Mooi,F.R.
  TITLE     Characterization of IS1001, an insertion sequence element of
            Bordetella parapertussis
  JOURNAL   J Bacteriol 175 (1), 141-147 (1993)
   PUBMED   8093238
REFERENCE   3  (residues 1 to 205)
  AUTHORS   Johansen,E. and Kibenich,A.
  TITLE     Isolation and characterization of IS1165, an insertion sequence of
            Leuconostoc mesenteroides subsp. cremoris and other lactic acid
            bacteria
  JOURNAL   Plasmid 27 (3), 200-206 (1992)
   PUBMED   1325060
REFERENCE   4  (residues 1 to 205)
  AUTHORS   Cirillo,J.D., Barletta,R.G., Bloom,B.R. and Jacobs,W.R. Jr.
  TITLE     A novel transposon trap for mycobacteria: isolation and
            characterization of IS1096
  JOURNAL   J Bacteriol 173 (24), 7772-7780 (1991)
   PUBMED   1660454
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013753.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01610.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Lacticaseibacillus suilingensis"
                     /db_xref="taxon:2799577"
     Protein         1..205
                     /product="transposase"
                     /calculated_mol_wt=23963
     Region          <1..192
                     /region_name="transpos_ISL3"
                     /note="ISL3 family transposase; NF033550"
                     /db_xref="CDD:468079"
ORIGIN      
        1 mnagyvhlvp rlfpnakvvv drfhivqmvs talnmvrvhv mktvpktste yrfmkrewkv
       61 flkrfeelda vntvyhasvg yfdtvvnlis kcldldpafr aayeayqsvl tavkkrdvma
      121 leetlmtyka lgnrmdqsmk slrkyryqvl nalrydysng fleginsqik kikntaygyq
      181 nwsnfinrif lervwfklsk rklaa
//
LOCUS       WP_236000612             122 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Bradyrhizobium
            uaiense].
ACCESSION   WP_236000612
VERSION     WP_236000612.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         <1..>122
                     /product="ABC transporter substrate-binding protein"
     Region          1..>122
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 rtlgqpdqgf egnrftgltm ydaltmwdls ssdkasalip glatewkvdd adktkwvfkl
       61 rpgvtfhdgs tfnadaviwn ldkvlndkap qfdkrqsaqv ktrlpsvasy akiddftvei
      121 tt
//
LOCUS       WP_236000628              81 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Bradyrhizobium
            uaiense].
ACCESSION   WP_236000628
VERSION     WP_236000628.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         <1..>81
                     /product="ABC transporter substrate-binding protein"
     Region          1..>81
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 lttgqpdrra gafqftayti ydplvawemd vadrpgklvp glatewkvdd adktkwvfkl
       61 rpgvtfhdgs pfnadavvwn v
//
LOCUS       WP_236000632              81 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Bradyrhizobium uaiense].
ACCESSION   WP_236000632
VERSION     WP_236000632.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 81)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         <1..>81
                     /product="AMP-binding protein"
     Region          1..>74
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
ORIGIN      
        1 kgdrvilymp mvpeavvaml acarigavhs vvfggfaake latmlrplqd daglglgage
       61 adrfieqrlv lhdaagleaa a
//
LOCUS       WP_236000569             531 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5801 repeats-in-toxin domain-containing protein, partial
            [Bradyrhizobium uaiense].
ACCESSION   WP_236000569
VERSION     WP_236000569.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 531)
  AUTHORS   Cirillo,S.L.G., Lum,J. and Cirillo,J.D.
  TITLE     Identification of novel loci involved in entry by Legionella
            pneumophila
  JOURNAL   Microbiology (Reading) 146 (Pt 6), 1345-1359 (2000)
   PUBMED   10846213
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039867.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19116.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         <1..531
                     /product="DUF5801 repeats-in-toxin domain-containing
                     protein"
     Region          <4..58
                     /region_name="DUF5801"
                     /note="Domain of unknown function (DUF5801); pfam19116"
                     /db_xref="CDD:465976"
     Region          <7..>530
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
ORIGIN      
        1 aawlvftltv dpatgnvtlt qdravhenta sspdthegis ltgglvtlta tvtdkdgdta
       61 sqkldlsshv tfhddgpswt saehgvianv agisvigdlq fttgadglgs lyftgvsldp
      121 lhptattiqa ggyavseyvd asgvlhgvan gadvftvald pttstylfkl yhtldsysqq
      181 sisssgdvhg sgpapyavls dtsghavvnv tgyhttgsfn vaswfnethd tltsskltqd
      241 tinassqglg vhsnnfkqgd fmrfdlggvg dnsngdtwty gqapgasavg tgnqisftvk
      301 aiggstiidy vvhsvdgtvt shvynsatdg ntltatghgn idyvemydvs gkskillagi
      361 nelvssgatd vpftvgvkdg dgdiasgafd vnvnggttls gtagndviva gvtnetltgn
      421 ggddkfvlnl aahftisdfn sgdlvlldva glslpagtsn altanqftss aatggtenna
      481 sawnesgstn kfffnntthe lwysangtgs dkvdlahlst gvpaaanihi f
//
LOCUS       WP_236000643              80 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit, partial [Bradyrhizobium uaiense].
ACCESSION   WP_236000643
VERSION     WP_236000643.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00528.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         <1..>80
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <1..23
                     /region_name="DppB"
                     /note="ABC-type dipeptide/oligopeptide/nickel transport
                     system, permease component [Amino acid transport and
                     metabolism, Inorganic ion transport and metabolism];
                     COG0601"
                     /db_xref="CDD:440366"
ORIGIN      
        1 pgsglllnsa ifqrdlpllq gtilvlalff vllnllvdia qafcaqrlde ilaqdvtgqc
       61 adragddahr dhrggdrrqh
//
LOCUS       WP_236000642              81 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit, partial [Bradyrhizobium uaiense].
ACCESSION   WP_236000642
VERSION     WP_236000642.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (residues 1 to 81)
  AUTHORS   Woodson,K. and Devine,K.M.
  TITLE     Analysis of a ribose transport operon from Bacillus subtilis
  JOURNAL   Microbiology (Reading) 140 (Pt 8), 1829-1838 (1994)
   PUBMED   7921236
REFERENCE   2  (residues 1 to 81)
  AUTHORS   Hogg,R.W., Voelker,C. and Von Carlowitz,I.
  TITLE     Nucleotide sequence and analysis of the mgl operon of Escherichia
            coli K12
  JOURNAL   Mol Gen Genet 229 (3), 453-459 (1991)
   PUBMED   1719366
REFERENCE   3  (residues 1 to 81)
  AUTHORS   Adams,M.D., Wagner,L.M., Graddis,T.J., Landick,R., Antonucci,T.K.,
            Gibson,A.L. and Oxender,D.L.
  TITLE     Nucleotide sequence and genetic characterization reveal six
            essential genes for the LIV-I and LS transport systems of
            Escherichia coli
  JOURNAL   J Biol Chem 265 (20), 11436-11443 (1990)
   PUBMED   2195019
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014684.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02653.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         <1..>81
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <40..>81
                     /region_name="LivH"
                     /note="Branched-chain amino acid ABC-type transport
                     system, permease component [Amino acid transport and
                     metabolism]; COG0559"
                     /db_xref="CDD:440325"
ORIGIN      
        1 galeqepkha ehdrperdqe qivawnilae eidralearr aatqdrdmva algvnqkwlf
       61 tsvfalgvfl aalggalqip r
//
LOCUS       WP_236000651              78 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Bradyrhizobium
            uaiense].
ACCESSION   WP_236000651
VERSION     WP_236000651.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         <1..>78
                     /product="ABC transporter substrate-binding protein"
     Region          1..>78
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 ftgltmydal tmwdlsssdk asalipglat ewkvddadkt kwrftlrrnv kfhdgsdfna
       61 daviwnldkv lndkapqf
//
LOCUS       WP_236000661              71 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Bradyrhizobium uaiense].
ACCESSION   WP_236000661
VERSION     WP_236000661.1
KEYWORDS    RefSeq.
SOURCE      Bradyrhizobium uaiense
  ORGANISM  Bradyrhizobium uaiense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024736.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13340.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Bradyrhizobium uaiense"
                     /db_xref="taxon:2594946"
     Protein         1..>71
                     /product="transposase"
     Region          2..>70
                     /region_name="transpos_IS5_3"
                     /note="IS5 family transposase; NF033580"
                     /db_xref="CDD:468097"
ORIGIN      
        1 mdrlvlsdaa wkrmapliig rpdqkgstgr dnrmfveggl wivrtgspwr dlpevfgdwn
       61 svfrrfsrws i
//
LOCUS       WP_236000715             438 aa            linear   BCT 02-MAR-2025
DEFINITION  GHKL domain-containing protein [Levilactobacillus lanxiensis].
ACCESSION   WP_236000715
VERSION     WP_236000715.1
KEYWORDS    RefSeq.
SOURCE      Levilactobacillus lanxiensis
  ORGANISM  Levilactobacillus lanxiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025854.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14501.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Levilactobacillus lanxiensis"
                     /db_xref="taxon:2799568"
     Protein         1..438
                     /product="GHKL domain-containing protein"
                     /calculated_mol_wt=49418
     Region          <220..412
                     /region_name="CitA"
                     /note="Sensor histidine kinase DipB regulating
                     citrate/malate metabolism [Signal transduction
                     mechanisms]; COG3290"
                     /db_xref="CDD:442519"
ORIGIN      
        1 mhvfdthfwi nlvlavtmqw fitlwigvir pqnwklplkw igwglipavi geswalilpp
       61 lsallylmhh rprmtvifvn ativiylvvv lvndvvravt ielfgfatsq mplviacrli
      121 fqlviyslfs iavtgmrlqp gnlerlafnr keqvtvmsll vslgvlaqls stiihrlait
      181 hammtfalsv elvmillist slffflqsff hrqrvralyq etllrtrydr risnqvrair
      241 efkqiyqkqm lrlgdyldak dyqgltayyq tlnsrwqats hlagieeegl qrlndpalks
      301 llfqkilvaq nrglslrlev ptvirslpmd svlllrvmgi lldnaieaga vagrtaiyca
      361 vldypdsvel avanpvsttt ppkinefmta gyttkgeghg qglntvreiv detpnaalqi
      421 alkrgmlylt liltkpgr
//
LOCUS       WP_236000763             351 aa            linear   BCT 02-MAR-2025
DEFINITION  type II secretion system F family protein [Levilactobacillus
            lanxiensis].
ACCESSION   WP_236000763
VERSION     WP_236000763.1
KEYWORDS    RefSeq.
SOURCE      Levilactobacillus lanxiensis
  ORGANISM  Levilactobacillus lanxiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
REFERENCE   1  (residues 1 to 351)
  AUTHORS   Desvaux,M., Hebraud,M., Talon,R. and Henderson,I.R.
  TITLE     Secretion and subcellular localizations of bacterial proteins: a
            semantic awareness issue
  JOURNAL   Trends Microbiol 17 (4), 139-145 (2009)
   PUBMED   19299134
REFERENCE   2  (residues 1 to 351)
  AUTHORS   Desvaux,M., Parham,N.J., Scott-Tucker,A. and Henderson,I.R.
  TITLE     The general secretory pathway: a general misnomer?
  JOURNAL   Trends Microbiol 12 (7), 306-309 (2004)
   PUBMED   15223057
REFERENCE   3  (residues 1 to 351)
  AUTHORS   Peabody,C.R., Chung,Y.J., Yen,M.R., Vidal-Ingigliardi,D.,
            Pugsley,A.P. and Saier,M.H.
  TITLE     Type II protein secretion and its relationship to bacterial type IV
            pili and archaeal flagella
  JOURNAL   Microbiology (Reading) 149 (Pt 11), 3051-3072 (2003)
   PUBMED   14600218
REFERENCE   4  (residues 1 to 351)
  AUTHORS   Py,B., Loiseau,L. and Barras,F.
  TITLE     An inner membrane platform in the type II secretion machinery of
            Gram-negative bacteria
  JOURNAL   EMBO Rep 2 (3), 244-248 (2001)
   PUBMED   11266368
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012694.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00482.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Levilactobacillus lanxiensis"
                     /db_xref="taxon:2799568"
     Protein         1..351
                     /product="type II secretion system F family protein"
                     /calculated_mol_wt=39231
     Region          28..346
                     /region_name="T4P_ComGB"
                     /note="competence type IV pilus assembly protein ComGB;
                     NF041012"
                     /db_xref="CDD:468941"
ORIGIN      
        1 mktqqqprll arlrrqnfgr arwplttqar fcqlladqla sgfslkqavt flrtvggefp
       61 aglatleqal lggadlvpll apylqpniyf qlqvtttyge lapalreaae llrlmatqrq
      121 rlrqllaypl glfvsmaglf ltlqvgilpq lqhevaptqt lpigwqqysw lggglilvlv
      181 lvsaarwwmr qpslrlasly lrvpfigric qtyyayylta nlgqlvqsgl svkqmiavlq
      241 hlperallhq layrlerqla ggqspvgwlr eqafipaqvl vflqkgstsa qlarelrafs
      301 tlqyrelvrr terglalvqp illgvvalli vgaylslllp myqnlqgvyn d
//
LOCUS       WP_236001049             390 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC-three component system protein [Agrobacterium leguminum].
ACCESSION   WP_236001049
VERSION     WP_236001049.1
KEYWORDS    RefSeq.
SOURCE      Agrobacterium leguminum
  ORGANISM  Agrobacterium leguminum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (residues 1 to 390)
  AUTHORS   Krishnan,A., Burroughs,A.M., Iyer,L.M. and Aravind,L.
  TITLE     Comprehensive classification of ABC ATPases and their functional
            radiation in nucleoprotein dynamics and biological conflict systems
  JOURNAL   Nucleic Acids Res 48 (18), 10045-10075 (2020)
   PUBMED   32894288
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042658.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20283.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Agrobacterium leguminum"
                     /db_xref="taxon:2792015"
     Protein         1..390
                     /product="ABC-three component system protein"
                     /calculated_mol_wt=43959
     Region          264..383
                     /region_name="CTD7"
                     /note="C-terminal domain 7 of the ABC-three component
                     (ABC-3C) systems; pfam20283"
                     /db_xref="CDD:466433"
ORIGIN      
        1 mglridntaa aqaagyilql dralyhlaha aggdvavave hvddvavvrd gkiilleqdk
       61 sttrsearll gdrtraiwrt lqiwlrhaet idgahcqryl ffvnhwvssp iaqlikergc
      121 gkasvadivg alrkagskrt takvqilied vlsrsdssla dliskvelve atdleidrrs
      181 ianglglnpr adaadildgl fgwltnrvrl ewsegrpgli trdevlvqsh alqakqaksr
      241 flprasgeie iddelrkgql srnfvehlsr idaegedivq avdhflkfni ekhrlvragd
      301 vpdaewshrs drlrerwagl mrrrrrelkg qrncdigqti ladvtydhre vldghsceel
      361 ymtsghyhrl aeedevwwdp tfrkagkdei
//
LOCUS       WP_236001052             253 aa            linear   BCT 02-MAR-2025
DEFINITION  autoinducer binding domain-containing protein [Agrobacterium
            leguminum].
ACCESSION   WP_236001052
VERSION     WP_236001052.1
KEYWORDS    RefSeq.
SOURCE      Agrobacterium leguminum
  ORGANISM  Agrobacterium leguminum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03472.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Agrobacterium leguminum"
                     /db_xref="taxon:2792015"
     Protein         1..253
                     /product="autoinducer binding domain-containing protein"
                     /calculated_mol_wt=28156
     Region          18..253
                     /region_name="PRK13870"
                     /note="transcriptional regulator TraR; Provisional"
                     /db_xref="CDD:172390"
ORIGIN      
        1 malngksaar aggirremna wlrklidtts mmktsratae lldhltrelg fdfyhvvtvr
       61 hpglgnslls napkewldiy rqehfdridp vlthareima pfvfdfeheg kvarrshqtf
      121 yssadeagir agicmpvmap fsgfftlslf sgdvalpqky qlqpvlsana vgllhmcvea
      181 teaasirapa ieltarqsmv lkwaaegktt qeiallenmt hhtvnfhmkn irqklktvtl
      241 pqttalatkl kli
//
LOCUS       WP_236001743             540 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1302 family protein [Paraburkholderia elongata].
ACCESSION   WP_236001743
VERSION     WP_236001743.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018662.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06980.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         1..540
                     /product="DUF1302 family protein"
                     /calculated_mol_wt=59253
     Region          <161..>279
                     /region_name="DUF1302"
                     /note="Protein of unknown function (DUF1302); pfam06980"
                     /db_xref="CDD:462059"
ORIGIN      
        1 mkemqgeakk rslsrharrs aaslatipal lmsldyasaa yaadadaaaa eqqqvqptsi
       61 fsglaglqen ltlggfvrtw asvnlqnhpe tsgddagklq mlrgslelna glktgplrwt
      121 aigrfdrevl tsyekdlqdm arrftpggpg ssllsqynqn elrefyvdsd igdrvhvrlg
      181 kqqivwgetd ffhptdliqg ydyrwrtfve pesdevrkpl iianakvsvp evdgdlqlvl
      241 rpgldrkrdi gnsydlyggr waaqpfkgid flagatrydy dhpygkansp tggarwtgla
      301 gpvnyafsyl rtfapdpvln ptanpigktp sgalgdfffp tinvfdasvs geipvtgtva
      361 nlevayqpsr yfntgtglpn gtqgtgpvvr kdvitttirl dqklrlesll gtnapslfsl
      421 qmfdtwiqhf kssddivaqv gwsapakrhd tlvtafltln ymssrlnpql aggvdvstgd
      481 afvipsieyq lgnhwrflae adlffpkhsr gnpaqlgqst yvladfanns qlmlratyqf
//
LOCUS       WP_236001778             114 aa            linear   BCT 02-MAR-2025
DEFINITION  YciI family protein [Paraburkholderia elongata].
ACCESSION   WP_236001778
VERSION     WP_236001778.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 114)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015735.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03795.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         1..114
                     /product="YciI family protein"
                     /calculated_mol_wt=13030
     Region          1..93
                     /region_name="YCII"
                     /note="YCII-related domain; cl00999"
                     /db_xref="CDD:445220"
ORIGIN      
        1 msyavicldr pdtrelrdrt rlahmeyina hrklmqlgaa lledagegri gmmiavdlpn
       61 reaveefmrn epynaagife svmirkcarv fpetdpahfd nllieerrka vlqk
//
LOCUS       WP_236001808             136 aa            linear   BCT 02-MAR-2025
DEFINITION  glutathione S-transferase N-terminal domain-containing protein
            [Paraburkholderia elongata].
ACCESSION   WP_236001808
VERSION     WP_236001808.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024809.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13417.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         1..136
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /GO_process="GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=15205
     Region          2..74
                     /region_name="GST_N_4"
                     /note="GST_N family, unknown subfamily 4; composed of
                     uncharacterized bacterial proteins with similarity to
                     GSTs. GSTs are cytosolic dimeric proteins involved in
                     cellular detoxification by catalyzing the conjugation of
                     glutathione (GSH) with a wide range of...; cd03056"
                     /db_xref="CDD:239354"
     Site            order(12,14..15,17..18,21..22,67,70..71)
                     /site_type="other"
                     /note="putative C-terminal domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:239354"
     Site            order(12,52..54,65..66)
                     /site_type="other"
                     /note="putative GSH binding site (G-site) [chemical
                     binding]"
                     /db_xref="CDD:239354"
     Site            order(52,64..65,67..68,71)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:239354"
ORIGIN      
        1 mirlydfels gscykirlfl nilgveyekq pvdfvskehk nesylklnpf geipileded
       61 lrlrdaqail iylakkydgs gqwfpedaas agrvaqwlat gggeimnsag arlvkilnir
      121 wiwksskpap naslas
//
LOCUS       WP_236001802             100 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Paraburkholderia elongata].
ACCESSION   WP_236001802
VERSION     WP_236001802.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 100)
  AUTHORS   Tavladoraki,P., Schinina,M.E., Cecconi,F., Di Agostino,S.,
            Manera,F., Rea,G., Mariottini,P., Federico,R. and Angelini,R.
  TITLE     Maize polyamine oxidase: primary structure from protein and cDNA
            sequencing
  JOURNAL   FEBS Lett 426 (1), 62-66 (1998)
   PUBMED   9598979
REFERENCE   2  (residues 1 to 100)
  AUTHORS   Tsugeno,Y. and Ito,A.
  TITLE     A key amino acid responsible for substrate selectivity of monoamine
            oxidase A and B
  JOURNAL   J Biol Chem 272 (22), 14033-14036 (1997)
   PUBMED   9162023
REFERENCE   3  (residues 1 to 100)
  AUTHORS   Schilling,B. and Lerch,K.
  TITLE     Cloning, sequencing and heterologous expression of the monoamine
            oxidase gene from Aspergillus niger
  JOURNAL   Mol Gen Genet 247 (4), 430-438 (1995)
   PUBMED   7770050
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         1..100
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=10974
     Region          <9..94
                     /region_name="YobN"
                     /note="Monoamine oxidase [Amino acid transport and
                     metabolism]; COG1231"
                     /db_xref="CDD:440844"
ORIGIN      
        1 msrrhlltll gaymwgpasy emgalppaer iavalsqgsq ihpqyaheyq ngfamswsrs
       61 pftngcfaaw tdalrqahya nlcqidgriv lagecgfrgr
//
LOCUS       WP_236001864             130 aa            linear   BCT 02-MAR-2025
DEFINITION  YhcN/YlaJ family sporulation lipoprotein [Heyndrickxia
            sporothermodurans].
ACCESSION   WP_236001864
VERSION     WP_236001864.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia sporothermodurans
  ORGANISM  Heyndrickxia sporothermodurans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021120.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09580.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Heyndrickxia sporothermodurans"
                     /db_xref="taxon:46224"
     Protein         1..130
                     /product="YhcN/YlaJ family sporulation lipoprotein"
                     /calculated_mol_wt=14451
     Region          1..128
                     /region_name="CoxA"
                     /note="Spore cortex protein CoxA (YrbB), YhcN/YlaJ family
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG5912"
                     /db_xref="CDD:444614"
ORIGIN      
        1 mkiaktiicv gvvsgllmgc gtnndnngtk rnyvspvryn nddrnvnvnn kmrvadeaad
       61 rvaklkevdr anvivtdnna yvavmltdrs rnelsktven kiakevrkad kdidnvyvsm
      121 frltristie
//
LOCUS       WP_236001915             157 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Paraburkholderia elongata].
ACCESSION   WP_236001915
VERSION     WP_236001915.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         1..157
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=17485
     Region          3..>127
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
ORIGIN      
        1 mdydiiggvh ghadkltall telgycrrmg twrhprrtav cvgdfidrgp hqldtidivr
       61 pmvdagsala vmgnhefnai awylrdpdqd deylrprqgk vgeenrnqha aflaesraqa
      121 rpswrdyrla slttavaria rtavdsrlla selcrga
//
LOCUS       WP_236001935             117 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Paraburkholderia elongata].
ACCESSION   WP_236001935
VERSION     WP_236001935.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         1..117
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=12561
     Region          <34..107
                     /region_name="PRK07041"
                     /note="SDR family oxidoreductase"
                     /db_xref="CDD:235914"
ORIGIN      
        1 mvaifmmlsf eltleiptla ypyrrrggvh sinlpralav emapirvnlv spglvrtplw
       61 atmseserea lyaasgaalp vgyvgeaedl aqtylylmtn ryatgqtvvv dgggvlv
//
LOCUS       WP_236002047             225 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaJ C-terminal domain-containing protein [Paraburkholderia
            elongata].
ACCESSION   WP_236002047
VERSION     WP_236002047.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 225)
  AUTHORS   Silva,J.C., Borges,J.C., Cyr,D.M., Ramos,C.H. and Torriani,I.L.
  TITLE     Central domain deletions affect the SAXS solution structure and
            function of yeast Hsp40 proteins Sis1 and Ydj1
  JOURNAL   BMC Struct Biol 11, 40 (2011)
   PUBMED   22011374
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 225)
  AUTHORS   Li,J., Qian,X. and Sha,B.
  TITLE     The crystal structure of the yeast Hsp40 Ydj1 complexed with its
            peptide substrate
  JOURNAL   Structure 11 (12), 1475-1483 (2003)
   PUBMED   14656432
REFERENCE   3  (residues 1 to 225)
  AUTHORS   Kelley,W.L.
  TITLE     The J-domain family and the recruitment of chaperone power
  JOURNAL   Trends Biochem Sci 23 (6), 222-227 (1998)
   PUBMED   9644977
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013705.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01556.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         1..225
                     /product="DnaJ C-terminal domain-containing protein"
                     /calculated_mol_wt=23315
     Region          1..201
                     /region_name="DnaJ_C"
                     /note="DnaJ C terminal domain; pfam01556"
                     /db_xref="CDD:460251"
ORIGIN      
        1 mtvpletvif ggaldvtmra prpcgtcdgn gklagrfacp scggdgkngh grncrtcsgy
       61 gavdetrcpn cngkgvvkte ktirvtvppg vvegtvlrvk gaggpglngg apgaafcrik
      121 vqahrtyklh gltltrdltv dfvtamlggs vpvelfganv kvavppmtra gkiitmekag
      181 lknsktgeng dlkfkvvidl pasarrlrse hkeilramfn aaaak
//
LOCUS       WP_236002081              91 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-hydroxy-acid oxidizing protein [Paraburkholderia elongata].
ACCESSION   WP_236002081
VERSION     WP_236002081.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 91)
  AUTHORS   Xia,Z.X. and Mathews,F.S.
  TITLE     Molecular structure of flavocytochrome b2 at 2.4 A resolution
  JOURNAL   J Mol Biol 212 (4), 837-863 (1990)
   PUBMED   2329585
REFERENCE   2  (residues 1 to 91)
  AUTHORS   Lindqvist,Y.
  TITLE     Refined structure of spinach glycolate oxidase at 2 A resolution
  JOURNAL   J Mol Biol 209 (1), 151-166 (1989)
   PUBMED   2681790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013253.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01070.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         1..91
                     /product="alpha-hydroxy-acid oxidizing protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=9294
     Region          <7..69
                     /region_name="TIM-like beta/alpha barrel domains"
                     /note="A large family of domains similar to triose
                     phosphate isomerase (TIM) which, in general, share an
                     eight beta/alpha closed barrel structure; cl21457"
                     /db_xref="CDD:473867"
ORIGIN      
        1 msqpvnvvka iamgakavll gratlyglaa dgergveavl smlkseidtt laqigcpdig
       61 qlsrdflwpy gpkadggapa pspltqlfea p
//
LOCUS       WP_236002089              70 aa            linear   BCT 02-MAR-2025
DEFINITION  glycine zipper domain-containing protein [Paraburkholderia
            elongata].
ACCESSION   WP_236002089
VERSION     WP_236002089.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039524.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19029.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         1..70
                     /product="glycine zipper domain-containing protein"
                     /calculated_mol_wt=7703
     Region          <4..68
                     /region_name="ElaB"
                     /note="Membrane-anchored ribosome-binding protein ElaB,
                     inhibits growth in stationary phase, YqjD/DUF883 family
                     [Translation, ribosomal structure and biogenesis];
                     COG4575"
                     /db_xref="CDD:443632"
ORIGIN      
        1 malklrdaan wasgsklrar lndtreamrq raevtisdaq eyvrenpwqt iaivsgvalm
       61 agtlfasrlr
//
LOCUS       WP_236002103             806 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Paraburkholderia elongata].
ACCESSION   WP_236002103
VERSION     WP_236002103.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 806)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 806)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 806)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 806)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..806
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         1..806
                     /product="ATP-binding protein"
                     /calculated_mol_wt=86482
     Region          192..297
                     /region_name="PAS_4"
                     /note="PAS fold; pfam08448"
                     /db_xref="CDD:312075"
     Region          <304..773
                     /region_name="TMAO_torS"
                     /note="TMAO reductase sytem sensor TorS; TIGR02956"
                     /db_xref="CDD:274362"
ORIGIN      
        1 msmfgtrtra ltprppaear taivvivlis slafllfqar kdaldnlllh qarlaiqfas
       61 aearvdtsdg vtliddavrh sssplagiaa wpgqktiaip lasgcaespv crglsdaqne
      121 dtqgkfiirn galfaslrgs kvavltsapl salaaglfgr ntmdiagvff lgcllllvre
      181 srlsdysvhr lldaspipll lidaqgqief anrqaldlfl ddplrslgkl qealrreahl
      241 ftwlisqqdt ggaietsefe tdsggavrhl lvsrqslpvr skrmiiasaa ditvrhdaet
      301 alvkaknaae alermksesl amishelrtp vngvlglaql lvqyelpega aqivrrmiqa
      361 gktlaaiind ivdlallevr hvrldrrrfd lrevitgaat lasaaavekg lmvrvsaltp
      421 lpsavfgdpa rlqqiiinlv sngikftesg hievktdvaa rrddwieivv evtdtgigia
      481 pdvipqlfrp fsqaetghek rfegtglgla iskglaeamg gsisvrsdig hgstfavrlp
      541 falaereesv pkvalssrvl vvddvalnrd vvsellraeg cdvtsagsgq ealdilktqh
      601 fdlvlmdirm pvmdglatta airssrephr htgpilglta nplptdkply llrgidgiie
      661 kpvevetlrs alrqatlpaq tvvteeperi erlrqklgqn rtlrivaafa qtasealegi
      721 vngcarasle kvaenahrla gaasnvgfqq ladaaadleq iartgsaiqv sdatltvvii
      781 yrdvesyvrt llssapvgpe nrypvp
//
LOCUS       WP_236002114             577 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Paraburkholderia elongata].
ACCESSION   WP_236002114
VERSION     WP_236002114.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 577)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         1..577
                     /product="AMP-binding protein"
                     /calculated_mol_wt=62807
     Region          29..569
                     /region_name="PRK13295"
                     /note="cyclohexanecarboxylate-CoA ligase; Reviewed"
                     /db_xref="CDD:171961"
ORIGIN      
        1 mkpltvrrcg qgssarsael frttqrdlmp feialsqara ntlraqgwwr dktinacfeq
       61 vlerspdkta lvahtrgnea trrisyreld rlvatasasl salgvgrgdv vsiqlpnvwq
      121 fvvtslaasr igavvnplmp ilrerelaym ldfceakvlv vpsryrghdh aamargllpq
      181 ltklkrlvvv gddgadgfdr vllnpdmqap vslsaaaarl qpddvsllmf ssgttgapkg
      241 vmhtsntlls tlftsiedlh lssddvvlai spvghllgya yqtmmplmlg attvlmdewe
      301 prvalelmrs ekvsfsaaat pfladllnav eagdpgapsf rllgcagapv pavlveraat
      361 cmnltvcsiw gmtetvagtl tqverarels avadgraarg nevrvvdeeg rpvplgttgr
      421 llfrgsslfv gylkrpelns ldaegwfdtg drayllndeg yiringrskd iiirggenip
      481 vfeieslllr hpaiaeiaiv gypderlger acafivlkpr ctfdtdamaq ymgasktakq
      541 ywperivice elpktgsgkv qkfrlrerai afasdqs
//
LOCUS       WP_236002139             181 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3331 domain-containing protein [Paraburkholderia elongata].
ACCESSION   WP_236002139
VERSION     WP_236002139.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11811.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         1..181
                     /product="DUF3331 domain-containing protein"
                     /calculated_mol_wt=19577
     Region          87..174
                     /region_name="DUF3331"
                     /note="Domain of unknown function (DUF3331); pfam11811"
                     /db_xref="CDD:432092"
ORIGIN      
        1 mnaepnttsd ilsenefcha palpalpssh hpsshrpdrl tsapevrdqw attlaaidqi
       61 ssppdpmrnp pdlsgrsrlg gellgsrkad ggdvrtytvt vveelsnalf alrwhdatlc
      121 nyeeqvwapc fapasgrcal sgehiskgdp vyrprirgwf iplnsdavil aselikasar
      181 v
//
LOCUS       WP_236002147             529 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Paraburkholderia elongata].
ACCESSION   WP_236002147
VERSION     WP_236002147.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 529)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         1..529
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=56300
     Region          5..177
                     /region_name="chemoreceptor_sensor"
                     /note="4-helix bundle ligand binding sensor domain of
                     chemoreceptors such as Tar or Tsr; cl00144"
                     /db_xref="CDD:444710"
     Site            order(59..60,63..64,66..67,70..71,152..153,155,161,164)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:438624"
     Site            order(66,71,152..153,155)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:438624"
     Region          <159..521
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(307..308,311..312,315,318..319,321..322,325,
                     328..329,332,335..336,339..340,343,346..347,349..350,354,
                     356..357,360,363..364,367..368,371,374,377..378,381,385,
                     388,395,399,402,405..406,409,412..413,416..417,419..420,
                     423..424,437..438,441,444..445,448,451..452,454..455,
                     458..459,462,465..466,469,472..473,475..476,479..480,
                     482..483,486,489..490,493,496)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            377..410
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 mklqnvrtgt rvavgfglil falvaltivg itrvnkinas lttindinsv ketyaiafrg
       61 svhnraialr dvvlvpprel psvlsrinel neayqeaagp ldkmvaarsa ayndekpalt
      121 aikadeartl plmadviarq qagdtagaqr vlldqarpaf vdwlnaidrf idleeqlnsv
      181 qgnaarevgr tfqvlmlvlt alailtggvi aywithditr alggepgqvk hlanairsgd
      241 lfqavrvrhg dsdsilatme rmrnalhdvv esvrqhadgv sttsiqisqg nadlstrtes
      301 qaaslqqtsa smdqltgtvk qnsdsakqas avataaeeia trgsqtvqsv vetmdgisas
      361 sermaeiisv iegiafqtni lalnaaveaa rageegrgfa vvasevrsla qraataakei
      421 kalidesvqr vqagsfrvrd agatmaeilq svrqvneima eiaaaseeqs igieqvgqai
      481 vqmdeatqqn aalveqasaa trsleeqafa lrsavsafri rgslpterd
//
LOCUS       WP_236002181             160 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Paraburkholderia
            elongata].
ACCESSION   WP_236002181
VERSION     WP_236002181.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 160)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         1..160
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=17124
     Region          <1..158
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mvaegavdlg fvedqvdadg ldvravaqde lvlvvapshp warhgstsad ivdlrdsawv
       61 lrepesgtrg ifekmvrslg gdpsgfeial elpsneavrs aveagagatv msrlvaassl
      121 sagtltalrw plpsrdflml rhqqryvtea mrvffemase
//
LOCUS       WP_236002275             423 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Paraburkholderia elongata].
ACCESSION   WP_236002275
VERSION     WP_236002275.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         1..423
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=43741
     Region          2..388
                     /region_name="2A0115"
                     /note="benzoate transport; TIGR00895"
                     /db_xref="CDD:273327"
ORIGIN      
        1 mqkivvflaa lsivldgfds qligfaipvl ikewgvtraa fapvvaagli gmgigsacag
       61 lladrfgrrw avigsvlvfg aatcgicfap diatiavlrf iaglgiggal pssttmtaef
      121 tparrrtlav tativcvplg gmvaglfahe ilptygwrgl fmiggvlpla lgvlllftlp
      181 esprflarrp qrwpelkrll grmsrpvasg cvftdareqa vekhtgftgl frgglaldtv
      241 aiwcafclcl lavysafswl ptmlstqgls vsvagsglta ynlggvvgal lcavviartg
      301 srwplilcsa ggaasallll gvnisahtgl lifglgvhgl fvnavqstmf alcayvyptr
      361 vratgtasal afgrlgaias afagavvite ggassylwml giamvivmva lmvvkrhipk
      421 pgv
//
LOCUS       WP_236002301             288 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1571 domain-containing protein [Paraburkholderia elongata].
ACCESSION   WP_236002301
VERSION     WP_236002301.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019240.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07608.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         1..288
                     /product="DUF1571 domain-containing protein"
                     /calculated_mol_wt=32195
     Region          87..288
                     /region_name="DUF1329"
                     /note="Protein of unknown function (DUF1329); cl46866"
                     /db_xref="CDD:481206"
ORIGIN      
        1 matppafaqn ddappaldta sagavkaptt pssqvgkltl dqqvkwlraa qqsgamekld
       61 daqlvalfqs ldplalpryi kegpngypsy efimsrseri hgqwpdkpdh mlvriahdpl
      121 riyakwlpdg ahagqeiiyd esrrtdemyg hlggimnvmp lwtslngala raqsnhqvrd
      181 lgteyianqy lsedkkyiea glshstqvev ktidgvrvva ftfetptgqp qfyakketlg
      241 ldlrhpyfrt vesynndgki fekivfesit pktfddstfd pknkaykf
//
LOCUS       WP_236002361              63 aa            linear   BCT 02-MAR-2025
DEFINITION  PHP domain-containing protein, partial [Paraburkholderia elongata].
ACCESSION   WP_236002361
VERSION     WP_236002361.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 63)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014826.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02811.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..63
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         1..>63
                     /product="PHP domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..>63
                     /region_name="nside_bi_sphtase"
                     /note="3',5'-nucleoside bisphosphate phosphatase;
                     NF041577"
                     /db_xref="CDD:469462"
ORIGIN      
        1 mnadlhchst vsdgqfapad varrahaggv tlwaltdhde vggqhearsa aealgmgyls
       61 gve
//
LOCUS       WP_236002363             298 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2515 family protein [Paraburkholderia elongata].
ACCESSION   WP_236002363
VERSION     WP_236002363.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10720.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         1..298
                     /product="DUF2515 family protein"
                     /calculated_mol_wt=33582
     Region          <136..198
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
ORIGIN      
        1 mqecdnprfp icypnwkeee aaakkraedd kqdcincwrf yqkkaeaivs vddpiarnrr
       61 inaayaqlwl ddhrfqwagl aafaskqvgc gllnaaemig ksnrqrdayq qwdktssple
      121 rvspyasprm pvpdqasgeg arkvyemlak gntalfldiw plhmfykefg lkrferclee
      181 rallsgsivw piadsvrfgv ptpeirrgfk aidvgdiasg veilarheqi nilqpamynd
      241 aefamlmran qfawalnipt gsareiqmal snqctvtgan aryetfskhp lanladvg
//
LOCUS       WP_236002367             262 aa            linear   BCT 02-MAR-2025
DEFINITION  IclR family transcriptional regulator domain-containing protein
            [Paraburkholderia elongata].
ACCESSION   WP_236002367
VERSION     WP_236002367.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 262)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
REFERENCE   2  (residues 1 to 262)
  AUTHORS   Galinier,A., Bleicher,F., Negre,D., Perriere,G., Duclos,B.,
            Cozzone,A.J. and Cortay,J.C.
  TITLE     Primary structure of the intergenic region between aceK and iclR in
            the Escherichia coli chromosome
  JOURNAL   Gene 97 (1), 149-150 (1991)
   PUBMED   1995429
REFERENCE   3  (residues 1 to 262)
  AUTHORS   Smith,C.P. and Chater,K.F.
  TITLE     Structure and regulation of controlling sequences for the
            Streptomyces coelicolor glycerol operon
  JOURNAL   J Mol Biol 204 (3), 569-580 (1988)
   PUBMED   3225846
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01614.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         1..262
                     /product="IclR family transcriptional regulator
                     domain-containing protein"
                     /calculated_mol_wt=27854
     Region          15..262
                     /region_name="pcaR_pcaU"
                     /note="beta-ketoadipate pathway transcriptional
                     regulators, PcaR/PcaU/PobR family; TIGR02431"
                     /db_xref="CDD:131484"
ORIGIN      
        1 mspiedesgt ikshakegmg glakglaiie afgpnttrmt vsdaanladl srpaarrcll
       61 tlvehgylah dgkfftplpr mlrlgsayls tsslpqiaqp llastrdklq esvslavlde
      121 gyavfiarae avrivstgvk lggrlpaycs atgrvllagl peeqvrahle svpmkrltdr
      181 tvanldgvlk airraaedgy aisdeeieig msamavpvkn sagqieaavs vsvysgrvni
      241 etlretflpa lretaarlqr sl
//
LOCUS       WP_236002368             243 aa            linear   BCT 02-MAR-2025
DEFINITION  IclR family transcriptional regulator domain-containing protein
            [Paraburkholderia elongata].
ACCESSION   WP_236002368
VERSION     WP_236002368.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 243)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
REFERENCE   2  (residues 1 to 243)
  AUTHORS   Galinier,A., Bleicher,F., Negre,D., Perriere,G., Duclos,B.,
            Cozzone,A.J. and Cortay,J.C.
  TITLE     Primary structure of the intergenic region between aceK and iclR in
            the Escherichia coli chromosome
  JOURNAL   Gene 97 (1), 149-150 (1991)
   PUBMED   1995429
REFERENCE   3  (residues 1 to 243)
  AUTHORS   Smith,C.P. and Chater,K.F.
  TITLE     Structure and regulation of controlling sequences for the
            Streptomyces coelicolor glycerol operon
  JOURNAL   J Mol Biol 204 (3), 569-580 (1988)
   PUBMED   3225846
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01614.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         1..243
                     /product="IclR family transcriptional regulator
                     domain-containing protein"
                     /calculated_mol_wt=26278
     Region          2..243
                     /region_name="pcaR_pcaU"
                     /note="beta-ketoadipate pathway transcriptional
                     regulators, PcaR/PcaU/PobR family; TIGR02431"
                     /db_xref="CDD:131484"
ORIGIN      
        1 mglekglsvi eafgmkkgpl tvtqaaeitg htkgsvrrsl ltlcrlgyat qdgysfvlap
       61 ralrlgyayv vsdpltkvaq pileitsert qesasiavld lqdavfvars thrrrlssgl
      121 gvgsrlpayc satgrvllsg rppaevrfml nrmarpaltp htlttitsim keiefvgrhg
      181 yaiideelei girsiavpir nargemvaam slsvstsrmt regvvehllp elesarrhla
      241 all
//
LOCUS       WP_236002467             114 aa            linear   BCT 02-MAR-2025
DEFINITION  PilZ domain-containing protein [Paraburkholderia elongata].
ACCESSION   WP_236002467
VERSION     WP_236002467.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 114)
  AUTHORS   Galperin,M.Y. and Chou,S.H.
  TITLE     Structural Conservation and Diversity of PilZ-Related Domains
  JOURNAL   J Bacteriol 202 (4), e00664-19 (2020)
   PUBMED   31740493
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 114)
  AUTHORS   Paul,K., Nieto,V., Carlquist,W.C., Blair,D.F. and Harshey,R.M.
  TITLE     The c-di-GMP binding protein YcgR controls flagellar motor
            direction and speed to affect chemotaxis by a 'backstop brake'
            mechanism
  JOURNAL   Mol Cell 38 (1), 128-139 (2010)
   PUBMED   20346719
REFERENCE   3  (residues 1 to 114)
  AUTHORS   Benach,J., Swaminathan,S.S., Tamayo,R., Handelman,S.K.,
            Folta-Stogniew,E., Ramos,J.E., Forouhar,F., Neely,H.,
            Seetharaman,J., Camilli,A. and Hunt,J.F.
  TITLE     The structural basis of cyclic diguanylate signal transduction by
            PilZ domains
  JOURNAL   EMBO J 26 (24), 5153-5166 (2007)
   PUBMED   18034161
REFERENCE   4  (residues 1 to 114)
  AUTHORS   Ryjenkov,D.A., Simm,R., Romling,U. and Gomelsky,M.
  TITLE     The PilZ domain is a receptor for the second messenger c-di-GMP:
            the PilZ domain protein YcgR controls motility in enterobacteria
  JOURNAL   J Biol Chem 281 (41), 30310-30314 (2006)
   PUBMED   16920715
REFERENCE   5  (residues 1 to 114)
  AUTHORS   Amikam,D. and Galperin,M.Y.
  TITLE     PilZ domain is part of the bacterial c-di-GMP binding protein
  JOURNAL   Bioinformatics 22 (1), 3-6 (2006)
   PUBMED   16249258
REFERENCE   6  (residues 1 to 114)
  AUTHORS   Alm,R.A., Bodero,A.J., Free,P.D. and Mattick,J.S.
  TITLE     Identification of a novel gene, pilZ, essential for type 4 fimbrial
            biogenesis in Pseudomonas aeruginosa
  JOURNAL   J Bacteriol 178 (1), 46-53 (1996)
   PUBMED   8550441
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018894.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07238.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         1..114
                     /product="PilZ domain-containing protein"
                     /GO_function="GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /calculated_mol_wt=12659
     Region          <4..109
                     /region_name="YcgR"
                     /note="Cyclic di-GMP-binding flagellar brake protein
                     FlgZ/YcgR, contains PilZNR(YcgR) and PilZ domains [Cell
                     motility]; COG5581"
                     /db_xref="CDD:444320"
ORIGIN      
        1 midpyfcsgt lpegkpfrle mhdlslggva lrtpdenian leigvtlngv mlhvknqrtv
       61 aldlqlvsrr fltlpkggkl filgfrflsl paqaekmfqq riaqleikrg allr
//
LOCUS       WP_236002500              76 aa            linear   BCT 02-MAR-2025
DEFINITION  TetR/AcrR family transcriptional regulator C-terminal
            domain-containing protein, partial [Paraburkholderia elongata].
ACCESSION   WP_236002500
VERSION     WP_236002500.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 76)
  AUTHORS   Quinones,B., Pujol,C.J. and Lindow,S.E.
  TITLE     Regulation of AHL production and its contribution to epiphytic
            fitness in Pseudomonas syringae
  JOURNAL   Mol Plant Microbe Interact 17 (5), 521-531 (2004)
   PUBMED   15141956
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025605.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14246.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         <1..76
                     /product="TetR/AcrR family transcriptional regulator
                     C-terminal domain-containing protein"
     Region          <18..71
                     /region_name="TetR_C_11"
                     /note="Tetracyclin repressor-like, C-terminal domain;
                     cl23808"
                     /db_xref="CDD:474063"
ORIGIN      
        1 arhgarfrti carrwpngtl qlddvvlatg qflhlmlrgi rtrllcvtkr rpgasergni
       61 arqavrvfva gckagk
//
LOCUS       WP_236002510             343 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Paraburkholderia
            elongata].
ACCESSION   WP_236002510
VERSION     WP_236002510.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         1..343
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=38170
     Region          <123..324
                     /region_name="PRK09685"
                     /note="DNA-binding transcriptional activator FeaR;
                     Provisional"
                     /db_xref="CDD:236612"
ORIGIN      
        1 mllppepptl apgivhsnfs vqgdarqsfl awqermspvy diqpsskqae dtfvaslsry
       61 tidnlsffdf rtapnlavrs lgrvstesvr ditfsvfleg ppaqflggkp rsdaqpipqv
      121 psilaldmdq pctirsfhgr illlfvpral versfpdaas lhgrwihatt pltriliehl
      181 valkrqivgl skeeahqsfl tavellvaaf srqaglsgng raavraavyg qvrrhveanl
      241 hdpdlspdsv laslhlsras vyrlfehegg laayirsrrl rmaadelvrf phvevqdias
      301 glgfndassf trafrrafdi aprelheyap llqrehprre rft
//
LOCUS       WP_236002517              99 aa            linear   BCT 02-MAR-2025
DEFINITION  group II intron maturase-specific domain-containing protein
            [Paraburkholderia elongata].
ACCESSION   WP_236002517
VERSION     WP_236002517.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 99)
  AUTHORS   Centron,D. and Roy,P.H.
  TITLE     Presence of a group II intron in a multiresistant Serratia
            marcescens strain that harbors three integrons and a novel gene
            fusion
  JOURNAL   Antimicrob Agents Chemother 46 (5), 1402-1409 (2002)
   PUBMED   11959575
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019984.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08388.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         1..99
                     /product="group II intron maturase-specific
                     domain-containing protein"
                     /calculated_mol_wt=12143
     Region          1..69
                     /region_name="GIIM"
                     /note="Group II intron, maturase-specific domain;
                     pfam08388"
                     /db_xref="CDD:429966"
ORIGIN      
        1 mrqtvrgwrl hrqtpatlag laeqwnptlq gwwnyfgtfy rtgmlqlyry idgklaqwar
       61 rkykrlwrhe qrsvewlrkm ktvyprlfah wrimgcqvg
//
LOCUS       WP_236002524             127 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Paraburkholderia elongata].
ACCESSION   WP_236002524
VERSION     WP_236002524.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 127)
  AUTHORS   Curcio,M.J. and Derbyshire,K.M.
  TITLE     The outs and ins of transposition: from mu to kangaroo
  JOURNAL   Nat Rev Mol Cell Biol 4 (11), 865-877 (2003)
   PUBMED   14682279
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016847.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04986.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         <1..127
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <42..108
                     /region_name="transpos_IS91"
                     /note="IS91 family transposase; NF033538"
                     /db_xref="CDD:468069"
ORIGIN      
        1 gssglawklr ifhvdtsmpl arkdpppfal tftggtrsfh sllhvlpsgf hrirhyglla
       61 npvrrasltk vrelldvvpe agtqpddprg aappvfvcrh cgapmividi lqrtapirap
      121 pvprget
//
LOCUS       WP_236002188              95 aa            linear   BCT 02-MAR-2025
DEFINITION  4'-phosphopantetheinyl transferase superfamily protein
            [Paraburkholderia elongata].
ACCESSION   WP_236002188
VERSION     WP_236002188.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia elongata
  ORGANISM  Paraburkholderia elongata
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 95)
  AUTHORS   Reuter,K., Mofid,M.R., Marahiel,M.A. and Ficner,R.
  TITLE     Crystal structure of the surfactin synthetase-activating enzyme
            sfp: a prototype of the 4'-phosphopantetheinyl transferase
            superfamily
  JOURNAL   EMBO J 18 (23), 6823-6831 (1999)
   PUBMED   10581256
REFERENCE   2  (residues 1 to 95)
  AUTHORS   Lambalot,R.H., Gehring,A.M., Flugel,R.S., Zuber,P., LaCelle,M.,
            Marahiel,M.A., Reid,R., Khosla,C. and Walsh,C.T.
  TITLE     A new enzyme superfamily - the phosphopantetheinyl transferases
  JOURNAL   Chem Biol 3 (11), 923-936 (1996)
   PUBMED   8939709
REFERENCE   3  (residues 1 to 95)
  AUTHORS   Lambalot,R.H. and Walsh,C.T.
  TITLE     Cloning, overproduction, and characterization of the Escherichia
            coli holo-acyl carrier protein synthase
  JOURNAL   J Biol Chem 270 (42), 24658-24661 (1995)
   PUBMED   7559576
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013786.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01648.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Paraburkholderia elongata"
                     /db_xref="taxon:2675747"
     Protein         1..95
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
                     /GO_function="GO:0000287 - magnesium ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA]"
                     /calculated_mol_wt=10392
     Region          <3..50
                     /region_name="Sfp"
                     /note="Phosphopantetheinyl transferase [Coenzyme transport
                     and metabolism]; COG2091"
                     /db_xref="CDD:441694"
ORIGIN      
        1 mtldaseaaw ierldvtqqi gafydawvak ealvkttgvg itrglqhltv lprdsaevtl
       61 rnevpddmre iaarwiaape gysaclawst ktfar
//
LOCUS       WP_236002607             113 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Heyndrickxia
            sporothermodurans].
ACCESSION   WP_236002607
VERSION     WP_236002607.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia sporothermodurans
  ORGANISM  Heyndrickxia sporothermodurans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
REFERENCE   1  (residues 1 to 113)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 113)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 113)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 113)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Heyndrickxia sporothermodurans"
                     /db_xref="taxon:46224"
     Protein         1..113
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=12769
     Region          1..>109
                     /region_name="LolD"
                     /note="ABC-type lipoprotein export system, ATPase
                     component [Cell wall/membrane/envelope biogenesis];
                     COG1136"
                     /db_xref="CDD:440751"
ORIGIN      
        1 mieiinmnkt fdrktifknf nlevksgefv gvvgksgqgk ttllniigtl eeadsgiiki
       61 mdkdihkkky krlllrdqlg fifqnyalid nasvnenlei alkhkkmkkt plc
//
LOCUS       WP_236002668             323 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase [Levilactobacillus wangkuiensis].
ACCESSION   WP_236002668
VERSION     WP_236002668.1
KEYWORDS    RefSeq.
SOURCE      Levilactobacillus wangkuiensis
  ORGANISM  Levilactobacillus wangkuiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
REFERENCE   1  (residues 1 to 323)
  AUTHORS   Urbach,C., Evrard,C., Pudzaitis,V., Fastrez,J., Soumillion,P. and
            Declercq,J.P.
  TITLE     Structure of PBP-A from Thermosynechococcus elongatus, a
            penicillin-binding protein closely related to class A
            beta-lactamases
  JOURNAL   J Mol Biol 386 (1), 109-120 (2009)
   PUBMED   19100272
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024748.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13354.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Levilactobacillus wangkuiensis"
                     /db_xref="taxon:2799566"
     Protein         1..323
                     /product="serine hydrolase"
                     /GO_function="GO:0008800 - beta-lactamase activity
                     [Evidence IEA]"
                     /GO_process="GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=35431
     Region          60..309
                     /region_name="PenP"
                     /note="Beta-lactamase class A [Defense mechanisms];
                     COG2367"
                     /db_xref="CDD:441934"
ORIGIN      
        1 mpmkhakrlp lkdllvkyri vvmigaivvl gftgifsvqa rqkqatphvq adkpatsrqi
       61 saqqrhvkrq lhtyfkkita dgttsvtfyn lgatkgsqsa ksavanqfyk sgklatsana
      121 htpevtasty kiyiaaylfh lssqqaytwt ptnqdgfhrm ivnsdndfpe gildtyglag
      181 ineylssegl yaptfvmnqe stttaaslqk mliklarada pfnnahnrqw llslmkqqvy
      241 rdgipagaaa atkgtlvadk vgwladtnnd agivtlpngq ryvlvimthg hgqtgftgfp
      301 rmakitkhvq klvynpklvk nle
//
LOCUS       WP_236002708             123 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3021 family protein [Levilactobacillus wangkuiensis].
ACCESSION   WP_236002708
VERSION     WP_236002708.1
KEYWORDS    RefSeq.
SOURCE      Levilactobacillus wangkuiensis
  ORGANISM  Levilactobacillus wangkuiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022896.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11457.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Levilactobacillus wangkuiensis"
                     /db_xref="taxon:2799566"
     Protein         1..123
                     /product="DUF3021 family protein"
                     /calculated_mol_wt=13846
     Region          <35..123
                     /region_name="DUF3021"
                     /note="Protein of unknown function (DUF3021); pfam11457"
                     /db_xref="CDD:402870"
ORIGIN      
        1 mnlvksatir gtipfvimtg itlimrtqki dsfqvkstfv tgliitivsa ttviyqigqw
       61 slakqslvhf lfmvvtvlpc lifsgwfptr niidflkiig yflvtgmilw sfayllfgkl
      121 fnr
//
LOCUS       WP_236002780             182 aa            linear   BCT 02-MAR-2025
DEFINITION  PKD domain-containing protein, partial [Cysteiniphilum marinum].
ACCESSION   WP_236002780
VERSION     WP_236002780.1
KEYWORDS    RefSeq.
SOURCE      Cysteiniphilum marinum
  ORGANISM  Cysteiniphilum marinum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Thiotrichales; Fastidiosibacteraceae; Cysteiniphilum.
REFERENCE   1  (residues 1 to 182)
  AUTHORS   Eckhard,U., Schonauer,E. and Brandstetter,H.
  TITLE     Structural basis for activity regulation and substrate preference
            of clostridial collagenases G, H, and T
  JOURNAL   J Biol Chem 288 (28), 20184-20194 (2013)
   PUBMED   23703618
REFERENCE   2  (residues 1 to 182)
  AUTHORS   Hehemann,J.H., Marsters,C. and Boraston,A.B.
  TITLE     Ab initio phasing of a nucleoside hydrolase-related hypothetical
            protein from Saccharophagus degradans that is associated with
            carbohydrate metabolism
  JOURNAL   Proteins 79 (10), 2992-2998 (2011)
   PUBMED   21905122
REFERENCE   3  (residues 1 to 182)
  AUTHORS   Eckhard,U., Schonauer,E., Nuss,D. and Brandstetter,H.
  TITLE     Structure of collagenase G reveals a chew-and-digest mechanism of
            bacterial collagenolysis
  JOURNAL   Nat Struct Mol Biol 18 (10), 1109-1114 (2011)
   PUBMED   21947205
  REMARK    Publication Status: Online-Only
REFERENCE   4  (residues 1 to 182)
  AUTHORS   Kakuta,Y., Okino,N., Kajiwara,H., Ichikawa,M., Takakura,Y., Ito,M.
            and Yamamoto,T.
  TITLE     Crystal structure of Vibrionaceae Photobacterium sp. JT-ISH-224
            alpha2,6-sialyltransferase in a ternary complex with donor product
            CMP and acceptor substrate lactose: catalytic mechanism and
            substrate recognition
  JOURNAL   Glycobiology 18 (1), 66-73 (2008)
   PUBMED   17962295
REFERENCE   5  (residues 1 to 182)
  AUTHORS   Najmudin,S., Guerreiro,C.I., Carvalho,A.L., Prates,J.A.,
            Correia,M.A., Alves,V.D., Ferreira,L.M., Romao,M.J., Gilbert,H.J.,
            Bolam,D.N. and Fontes,C.M.
  TITLE     Xyloglucan is recognized by carbohydrate-binding modules that
            interact with beta-glucan chains
  JOURNAL   J Biol Chem 281 (13), 8815-8828 (2006)
   PUBMED   16314409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047160.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22352.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Cysteiniphilum marinum"
                     /db_xref="taxon:2774191"
     Protein         <1..>182
                     /product="PKD domain-containing protein"
     Region          <8..178
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
ORIGIN      
        1 ppykgnnddt yyltltvtds agvkseesta tytitadsql ipianaggdq svqegtehtv
       61 tgsgqaqgnr eiasyqwtgt gashlsntai atpvftappy kgnnddtyyl tltvtdsagv
      121 kseestatyt itadsqlips anaggdqsvq egtehtvtgs gqaqgnreia syqwtgtgas
      181 hl
//
LOCUS       WP_236002884             386 aa            linear   BCT 02-MAR-2025
DEFINITION  M14 family zinc carboxypeptidase [Luteirhabdus pelagi].
ACCESSION   WP_236002884
VERSION     WP_236002884.1
KEYWORDS    RefSeq.
SOURCE      Luteirhabdus pelagi
  ORGANISM  Luteirhabdus pelagi
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Luteirhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012471.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00246.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Luteirhabdus pelagi"
                     /db_xref="taxon:2792783"
     Protein         1..386
                     /product="M14 family zinc carboxypeptidase"
                     /GO_function="GO:0004181 - metallocarboxypeptidase
                     activity [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=44121
     Region          62..257
                     /region_name="Peptidase_M14_like"
                     /note="M14 family of metallocarboxypeptidases and related
                     proteins; cl11393"
                     /db_xref="CDD:472171"
     Site            order(70,73,122,131..132,161..162,243)
                     /site_type="active"
                     /db_xref="CDD:349427"
ORIGIN      
        1 meallsvyrs tfktklrgry itlnmvrdvl delnsdfhis hpgvsendqq ipmvkigegp
       61 ikvfawsqmh gnestttkal ldflnflqhp esyeeeashf kkkftfccip mlnpdgaaay
      121 trenangfdl nrdaqdlsqk esqvlrkifd sfqpdwclnl hdqrsiyglk egnpaiitfl
      181 apsankeksi tpsrkqamek ivkmyhmlqg fipnrvgryd ddfnlncvgd tfqqtdtpti
      241 lfeaghypgd yqrektreli flsylsffgl lddkveaktc dtshyfnipe nkksfldiii
      301 rnahfgkeka lidigiqyee ilkdntilft pkiektgkdl alfghneidv vgdellinsh
      361 kiadigveik sirrngidft edllkn
//
LOCUS       WP_236002943             509 aa            linear   BCT 02-MAR-2025
DEFINITION  Eco57I restriction-modification methylase domain-containing protein
            [Luteirhabdus pelagi].
ACCESSION   WP_236002943
VERSION     WP_236002943.1
KEYWORDS    RefSeq.
SOURCE      Luteirhabdus pelagi
  ORGANISM  Luteirhabdus pelagi
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Luteirhabdus.
REFERENCE   1  (residues 1 to 509)
  AUTHORS   Schluckebier,G., Kozak,M., Bleimling,N., Weinhold,E. and Saenger,W.
  TITLE     Differential binding of S-adenosylmethionine S-adenosylhomocysteine
            and Sinefungin to the adenine-specific DNA methyltransferase M.TaqI
  JOURNAL   J Mol Biol 265 (1), 56-67 (1997)
   PUBMED   8995524
REFERENCE   2  (residues 1 to 509)
  AUTHORS   Janulaitis,A., Vaisvila,R., Timinskas,A., Klimasauskas,S. and
            Butkus,V.
  TITLE     Cloning and sequence analysis of the genes coding for Eco57I type
            IV restriction-modification enzymes
  JOURNAL   Nucleic Acids Res 20 (22), 6051-6056 (1992)
   PUBMED   1334261
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019291.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07669.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Luteirhabdus pelagi"
                     /db_xref="taxon:2792783"
     Protein         1..509
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=59182
     Region          <13..179
                     /region_name="YtxK"
                     /note="Adenine-specific DNA N6-methylase [Replication,
                     recombination and repair]; COG0827"
                     /db_xref="CDD:440589"
     Region          <86..392
                     /region_name="YeeA"
                     /note="Type II restriction/modification system,
                     endonuclease and methylase domains [Defense mechanisms];
                     COG1002"
                     /db_xref="CDD:440626"
ORIGIN      
        1 madfitkrvl sffkdrkris vfepsvgdga fvdslkccky lsikldaidi ndkelskaan
       61 rwkkrnssft eidflefdtk nrysavvgnp pyikknflsd dqiemsrqih eqaklseats
      121 kniwvtflik sigllknngv lafvlpsell qvqfaeeire ylkkafdrie vftfndlmfe
      181 ckgqdtivlf aykkhtvkge ffanienqtv lmdesfglrr ndilveskik wthhflssde
      241 vtfleniksn lkqvshyses kpgivtaank ffiidketea kfnleeytkp iiqkglfvng
      301 svvfgekdfq dlersnrptr llqlndddei sdslkqylei gkeleipery kcksrnnwyv
      361 ipniatkpkg lffkrshlyp kilkntsraf vtdsaykiem negynldsfi fsfynsltll
      421 fsetngryyg ggvleltpse fkglplpyid idtnefiryv rkfekkerie dvlnindnki
      481 lntslgldyd sisrirnirq kllnkrlrs
//
LOCUS       WP_236002962             241 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2711 family protein, partial [Luteirhabdus pelagi].
ACCESSION   WP_236002962
VERSION     WP_236002962.1
KEYWORDS    RefSeq.
SOURCE      Luteirhabdus pelagi
  ORGANISM  Luteirhabdus pelagi
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Luteirhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022377.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10924.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Luteirhabdus pelagi"
                     /db_xref="taxon:2792783"
     Protein         <1..241
                     /product="DUF2711 family protein"
     Region          32..239
                     /region_name="DUF2711"
                     /note="Protein of unknown function (DUF2711); pfam10924"
                     /db_xref="CDD:402483"
ORIGIN      
        1 plciilvkkf dfnntppfys ewdenisefy srefenifii lnpfielkgn ydrnneyhni
       61 wfndqtmdyp tskyivnfcn elkweevikk sklntisein halinyglkk efqnrkladk
      121 lyefcnqeki fyppdgeftp fniakiikll nelniekiel tsefgdykte lktkelsilf
      181 sehnynspsi isidkslmlv nhwdsyvtvl atnkklsrgk ltsfgfevkn tnefprlnyr
      241 t
//
LOCUS       WP_236002975             110 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3847 domain-containing protein [Streptococcus vaginalis].
ACCESSION   WP_236002975
VERSION     WP_236002975.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus vaginalis
  ORGANISM  Streptococcus vaginalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 110)
  AUTHORS   Ellrott,K., Jaroszewski,L., Li,W., Wooley,J.C. and Godzik,A.
  TITLE     Expansion of the protein repertoire in newly explored environments:
            human gut microbiome specific protein families
  JOURNAL   PLoS Comput Biol 6 (6), e1000798 (2010)
   PUBMED   20532204
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024360.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12958.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Streptococcus vaginalis"
                     /db_xref="taxon:2748301"
     Protein         1..110
                     /product="DUF3847 domain-containing protein"
                     /calculated_mol_wt=13253
     Region          13..75
                     /region_name="DUF3847"
                     /note="Protein of unknown function (DUF3847); pfam12958"
                     /db_xref="CDD:432900"
ORIGIN      
        1 mkkleqirqe skeikdkidd teerlrqlkn qekkilkqdi vkrrkerthr litrgailes
       61 lienaeeltd eeiterilrr kqdlkyipme ivtchyeere nnlcnqilgi
//
LOCUS       WP_236002987             232 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Streptococcus
            vaginalis].
ACCESSION   WP_236002987
VERSION     WP_236002987.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus vaginalis
  ORGANISM  Streptococcus vaginalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 232)
  AUTHORS   Kreikemeyer,B., Beckert,S., Braun-Kiewnick,A. and Podbielski,A.
  TITLE     Group A streptococcal RofA-type global regulators exhibit a
            strain-specific genomic presence and regulation pattern
  JOURNAL   Microbiology (Reading) 148 (Pt 5), 1501-1511 (2002)
   PUBMED   11988525
REFERENCE   2  (residues 1 to 232)
  AUTHORS   McIver,K.S. and Myles,R.L.
  TITLE     Two DNA-binding domains of Mga are required for virulence gene
            activation in the group A streptococcus
  JOURNAL   Mol Microbiol 43 (6), 1591-1601 (2002)
   PUBMED   11952907
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016901.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05043.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Streptococcus vaginalis"
                     /db_xref="taxon:2748301"
     Protein         1..232
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=27439
     Region          36..110
                     /region_name="HTH_CRP"
                     /note="helix_turn_helix, cAMP Regulatory protein
                     C-terminus; DNA binding domain of prokaryotic regulatory
                     proteins belonging to the catabolite activator protein
                     family; cl46859"
                     /db_xref="CDD:481199"
ORIGIN      
        1 maelkeefqd lfclqvirrt vhldiytkln plvcfhriyq gsiflrllcy flreekesfa
       61 cfiqkeylsr atgyrlcdkc ldflkgirls ldkyqvigpe yrirfliall eykfgihlya
      121 itekeleivf glisasnahl sieafeeate esrffcilmv lmwkrkdfaa dipespeltr
      181 lktlfiypkl msltknimes aleitftqad ydylflayct dsqsffqrqm vr
//
LOCUS       WP_236002994             180 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA cytosine methyltransferase, partial [Streptococcus vaginalis].
ACCESSION   WP_236002994
VERSION     WP_236002994.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus vaginalis
  ORGANISM  Streptococcus vaginalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012372.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00145.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Streptococcus vaginalis"
                     /db_xref="taxon:2748301"
     Protein         <1..180
                     /product="DNA cytosine methyltransferase"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
     Region          <45..178
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
ORIGIN      
        1 tlcardykep kqiaipvltp erpekcqngr rfkengepmf tltgqdrhgi vvagklpgnh
       61 dqnsrvydpr glaptlstmq gggqennlvk vvdfynkitk devgtltssg ggstvragsf
      121 gitdgyrirk ltprecwrlq gfpdwafdka qevnsnsqly kqagnsvtvn vieaiskkfe
//
LOCUS       WP_236003067             201 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6461 domain-containing protein [Nonomuraea antri].
ACCESSION   WP_236003067
VERSION     WP_236003067.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea antri
  ORGANISM  Nonomuraea antri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039462.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20062.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Nonomuraea antri"
                     /db_xref="taxon:2730852"
     Protein         1..201
                     /product="DUF6461 domain-containing protein"
                     /calculated_mol_wt=22113
     Region          <68..198
                     /region_name="DUF6461"
                     /note="Family of unknown function (DUF6461); pfam20062"
                     /db_xref="CDD:437894"
ORIGIN      
        1 mraptylhdl lvstlfneel dhdmdlwslg fsalwikgad ldtlaqafsl dlstrvpshl
       61 seildhngdd gslwvaeagg wtgllparsd dafllslteg grhalsfsmd inghdrfkyi
      121 rdgdiivsfr ptwpdskrgs dphaldhlmd glrfqvgeed spveedesis salaligrit
      181 etdlaadwle avhsriglts r
//
LOCUS       WP_236003092              69 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6966 domain-containing protein, partial [Cysteiniphilum
            marinum].
ACCESSION   WP_236003092
VERSION     WP_236003092.1
KEYWORDS    RefSeq.
SOURCE      Cysteiniphilum marinum
  ORGANISM  Cysteiniphilum marinum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Thiotrichales; Fastidiosibacteraceae; Cysteiniphilum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046725.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22294.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Cysteiniphilum marinum"
                     /db_xref="taxon:2774191"
     Protein         <1..69
                     /product="DUF6966 domain-containing protein"
ORIGIN      
        1 ylivfdkaiq seinidtisn ilslywggma sfndlilqnn ysmdkednnk lsslrssiyn
       61 icctlisks
//
LOCUS       WP_236003121             417 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Cysteiniphilum marinum].
ACCESSION   WP_236003121
VERSION     WP_236003121.1
KEYWORDS    RefSeq.
SOURCE      Cysteiniphilum marinum
  ORGANISM  Cysteiniphilum marinum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Thiotrichales; Fastidiosibacteraceae; Cysteiniphilum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Cysteiniphilum marinum"
                     /db_xref="taxon:2774191"
     Protein         <1..417
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          30..405
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(39..40,43..44,47,79,129..130,132..134,137,157,
                     160..161,164,236,239..240,243..245,248,276,280,334..335,
                     339,343,361,364..365,368..369,372)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 rliiinlrkt ktneslnrki nmkpqtyvyf faiflvgvyv caydmyisal pllqndfavn
       61 vgqsqltltl fviagaifai paglisdhfg rkktlilycv iviigsivcl lsqsilafyi
      121 grilqgigas glyilavalp kdmltgntyv ktwqsltllf ylapslagfi ggyivyyggw
      181 ewvfngvvlv allaliliai yfkeiptaat evktssrkkf fsiasntqfl sycyitsaaw
      241 agmsifyict pyivittlgf ntivygwlsf lliffgalar winirwlngl msyeqsaysf
      301 sfvavlsgil fvsayflpah yaiyliglsa ilfgfssalv svntstmafl lidkshsava
      361 ssiyglmidl ivalslifan lmranlillg amiavfyiia imllmkfkep tattihv
//
LOCUS       WP_236003367             558 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-binding protein [Nonomuraea antri].
ACCESSION   WP_236003367
VERSION     WP_236003367.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea antri
  ORGANISM  Nonomuraea antri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024842.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13450.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Nonomuraea antri"
                     /db_xref="taxon:2730852"
     Protein         1..558
                     /product="NAD(P)-binding protein"
                     /calculated_mol_wt=59720
     Region          79..554
                     /region_name="HemY"
                     /note="Protoporphyrinogen oxidase HemY/PPOX [Coenzyme
                     transport and metabolism]; COG1232"
                     /db_xref="CDD:440845"
ORIGIN      
        1 mddlgmdrai srrdffdgia vtaagcaagg yastgipsla eppfrllgdt aqalavphal
       61 rdgrfwryag ppahtgetyd lvvagggvsg lsaahewlrg hpgsrvlvld nrdevggpgp
      121 essgeirsps petedlldrl gfppapphhq paaydgvmcd aetfgadrlv elgqdwiggl
      181 plgerarrel rtlhedppdw fpglpaedkq erlagltysr flleicrvhp dverfcrslp
      241 srewacdara fgaidawgqg ypgfrglgld ggkpsrfnaa gvrrrwderp arhapgpalv
      301 raltgrlihd geldrpgnrv rvrlsspvvl ardegpaavv gyfdghevrt vtagavilac
      361 phafipylvp dlpadqrqal raavrlpvle avvrlrgpgp wragrtrwtg aywcvselga
      421 paadgsvtar lyaapcrsel gpragaaaar wellrtpfeq lersvrdqla rllgragsdl
      481 gveavtvhrw ghgvaagyrr pwdafhpggp ypadtarrrf griaiagsda gagtgpadst
      541 daaitaacra vrelaaar
//
LOCUS       WP_236003389             956 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5915 domain-containing protein [Nonomuraea antri].
ACCESSION   WP_236003389
VERSION     WP_236003389.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea antri
  ORGANISM  Nonomuraea antri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039585.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19302.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..956
                     /organism="Nonomuraea antri"
                     /db_xref="taxon:2730852"
     Protein         1..956
                     /product="DUF5915 domain-containing protein"
                     /calculated_mol_wt=104034
     Region          59..773
                     /region_name="IleS"
                     /note="Isoleucyl-tRNA synthetase [Translation, ribosomal
                     structure and biogenesis]; COG0060"
                     /db_xref="CDD:439830"
     Region          755..941
                     /region_name="DUF5915"
                     /note="Domain of unknown function (DUF5915); pfam19302"
                     /db_xref="CDD:437134"
ORIGIN      
        1 mtdepethev feplaewadl agrvperlpd havvpgrpvr rfarepapsg gsraeaaedl
       61 yrrywtmkgc saplvrewtg hgigtellie qklglsgkdq ierhgvaefn rlchtslaap
      121 maprdveavw gtlkqlfera llvedervsp ycprcgtvla ghelarsyee tedqglyvrf
      181 plltgplagq adlliwttmp wtlipatlav vrpdlayvla aggraadrpv vlavgrvaaa
      241 lgegarvlre vpvgelvgtr yqapfdfvgp gsaddpdgdp aswrfvvadg fvqadegtgi
      301 vhtgaaygqd dmrvarrhgv pvvkpvgpdg rfdartgpya gryirdadgl itehlraagl
      361 llhahphrha fpfcvhcrtp lyyaampgwh ldtgdengwt vsrqrywgtp lplwrcgpcg
      421 htiavaslae lgalagaels gldphrpymd eisfacarcg gtarrvsgvt eswydagaqh
      481 arhpepfdlv cgsrswlysv ntvarlvsgr dgfrhtlrlp asvrhdgesh aamsdafrwa
      541 mfdepdsagk tlrtlwntav ffvtyanlar wtprpatgrt vmdrwilarl aatcagtdaa
      601 lsafdpaaaa rclavfsddl snwyvrrcrd rfgtgrdeaa fatlhtclvt aaglfspfap
      661 claaelhekl trapgqaapd pagvtqhpvh lteypqpgaa aredqlceam alarrltslg
      721 rearaaagip aryplrraiv tvtaaerasl drlreiieae lnvrtvefgd sagrrvtvkp
      781 nfralgrefg prtpdiaaai aaaepgrlla rldqdgrvel qgapirrehl qivetpvpgw
      841 qlsadgpyav avdlstdrel rleglareft rlvndlrrrr gcspgepval avkvlrdpdg
      901 eltaflerhr asiardtfad plrldpgpss dpagaelltv adgrlhvhla rrqggr
//
LOCUS       WP_236003546             637 aa            linear   BCT 02-MAR-2025
DEFINITION  N-6 DNA methylase [Nonomuraea antri].
ACCESSION   WP_236003546
VERSION     WP_236003546.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea antri
  ORGANISM  Nonomuraea antri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
REFERENCE   1  (residues 1 to 637)
  AUTHORS   Schouler,C., Gautier,M., Ehrlich,S.D. and Chopin,M.C.
  TITLE     Combinational variation of restriction modification specificities
            in Lactococcus lactis
  JOURNAL   Mol Microbiol 28 (1), 169-178 (1998)
   PUBMED   9593305
REFERENCE   2  (residues 1 to 637)
  AUTHORS   Schouler,C., Clier,F., Lerayer,A.L., Ehrlich,S.D. and Chopin,M.C.
  TITLE     A type IC restriction-modification system in Lactococcus lactis
  JOURNAL   J Bacteriol 180 (2), 407-411 (1998)
   PUBMED   9440532
REFERENCE   3  (residues 1 to 637)
  AUTHORS   Thorpe,P.H., Ternent,D. and Murray,N.E.
  TITLE     The specificity of sty SKI, a type I restriction enzyme, implies a
            structure with rotational symmetry
  JOURNAL   Nucleic Acids Res 25 (9), 1694-1700 (1997)
   PUBMED   9108149
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02384.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Nonomuraea antri"
                     /db_xref="taxon:2730852"
     Protein         1..637
                     /product="N-6 DNA methylase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=67126
     Region          2..59
                     /region_name="AlpA"
                     /note="DNA-binding transcriptional regulator AlpA
                     [Transcription, Mobilome: prophages, transposons];
                     COG3311"
                     /db_xref="CDD:442540"
     Region          169..370
                     /region_name="HsdM"
                     /note="Type I restriction-modification system, DNA
                     methylase subunit [Defense mechanisms]; COG0286"
                     /db_xref="CDD:440055"
ORIGIN      
        1 mmrddvtvna adiarladvg raavsnwrkr fddfprpvgg tatspafsla dveewlrrhd
       61 ryvevapler vwqalraitd dlrlgdavgy agallgylrr dpdgwrrlag lgdaalvrel
      121 pvapppgldv taalirsiae vglaegpvaa fdgicdryvd vhsrrllatp revaetmarv
      181 ggtagrvvld pacglgtlll asggattlgq dvngssarla evrlglhgyd adivtgdslr
      241 adafpgvqad vvicnppfne rgwgyeelts dprweyglpp rgeselawaq hclahvkpgg
      301 lvvimmpgva aarrpgrrvr gnllragalr aiitlsagaa passgapdlw vlrrpepggr
      361 ppsevlmvna gddlalaesa wqaftderel pagsravrii dlldeevdlt tghrvqvqdq
      421 pdgagyaalr ektaglaagl agqppglaat gggrrelpmt nlgelaragv vtilqgpikl
      481 aadgdlpvlt akdllvgrep tgrtadapgl vaiepgdvva plitgsgsip rvmtepgavl
      541 gaqlllirtd pdrldphfla gclraavgss vrlgssmrld prraqlprlp veeqrrygaa
      601 fhrlltfeda sralrqaadd lvaagidglf dgtlqpe
//
LOCUS       WP_236003651             609 aa            linear   BCT 02-MAR-2025
DEFINITION  SpoIIE family protein phosphatase [Nonomuraea antri].
ACCESSION   WP_236003651
VERSION     WP_236003651.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea antri
  ORGANISM  Nonomuraea antri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
REFERENCE   1  (residues 1 to 609)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Nonomuraea antri"
                     /db_xref="taxon:2730852"
     Protein         1..609
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=64280
     Region          70..>178
                     /region_name="NtrB"
                     /note="Signal transduction histidine kinase NtrB, nitrogen
                     specific [Signal transduction mechanisms]; COG3852"
                     /db_xref="CDD:443061"
     Region          202..607
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
ORIGIN      
        1 mtmpdlehal dalvgrvssl rearaaypsd laptldaala eldtaaellh earvelrksp
       61 krggkkdagq relkllrqvf rafpvpvivl dgggvvrrin petsrvlgsp dgylvgrsfp
      121 llvdvsrraa frshltsvlq tgqpsafetr lahqgrthvv qlaltrltmp gepqqmvaav
      181 alptevqlpe pgarrpeqsd galliaaarr qdlltrtatl lldeealrqp valprttrml
      241 aadwadwvia dmvrdglprr sivvapkshp vgdlarqves cdpagsqvvs qvlerrsgvv
      301 hemvddetll gfcaegpllt amgagslvcv pigagdgalt lvrthdkppf tladlsvlqe
      361 vglqlglavr aqssfqsrsr aadalsasva prnlpnvpgy eaaaiyhpga svgaefydvf
      421 pvsggwgfam ggaagkgeea asvsamvrgg lrvlsvwddd pglvirkvne alvaqgtgmf
      481 vmalagfvqg rrirlasagh hpaallqpdg nvrfaagggv plgispeaet gteeltlrvg
      541 etlvlysegl issrneagep ygeerladml grcagqapst vvkaieadrs vfsggqvwde
      601 ivvlalrgv
//
LOCUS       WP_236003970             610 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma factor-like helix-turn-helix DNA-binding protein [Nonomuraea
            antri].
ACCESSION   WP_236003970
VERSION     WP_236003970.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea antri
  ORGANISM  Nonomuraea antri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
REFERENCE   1  (residues 1 to 610)
  AUTHORS   Campbell,E.A., Muzzin,O., Chlenov,M., Sun,J.L., Olson,C.A.,
            Weinman,O., Trester-Zedlitz,M.L. and Darst,S.A.
  TITLE     Structure of the bacterial RNA polymerase promoter specificity
            sigma subunit
  JOURNAL   Mol Cell 9 (3), 527-539 (2002)
   PUBMED   11931761
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04545.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Nonomuraea antri"
                     /db_xref="taxon:2730852"
     Protein         1..610
                     /product="sigma factor-like helix-turn-helix DNA-binding
                     protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=66998
     Region          <25..542
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          <120..178
                     /region_name="RpoD"
                     /note="DNA-directed RNA polymerase, sigma subunit
                     (sigma70/sigma32) [Transcription]; COG0568"
                     /db_xref="CDD:440334"
     Region          306..364
                     /region_name="HARE-HTH"
                     /note="HB1, ASXL, restriction endonuclease HTH domain;
                     cl46430"
                     /db_xref="CDD:480770"
ORIGIN      
        1 msdlapplrw tspgqiapiv eepqlpeaww qavpldraca iagtqtvagh ladlavacwg
       61 hlvlgdilpl lrfsdpaeae rspetlgkdv vqklfngvfe rllepvptal papgrpdkpl
      121 pelidvlfaa lderqraiar drlyaaqrat ldelaqrfsv trerirqier dlrdhveawl
      181 sspeaaalva hvawlrgrlg savpaddlaa avpwhrsdlr tlgipawrfv rtlltgyeqt
      241 dgwlvsggad elrektrqlf tdgprplgea vamvaqlgvr edvaerwila vpqlrlldqh
      301 vvpwprsine kaeavlavag qplspeeiqe rigedyslvg irnqltaddr frrvdrnkyg
      361 ltrwggdeyl giremiarei eraggeasvs tivtnltsry dvsessvray sggpgfertq
      421 rgwirvagts pagesepyqp rkdvsetrrs frsrdgrwwh rvdvnaehlr gsgsplptgf
      481 aaylgmapgg qltastpsgd vviswhnqpt mgsirnvlad fkasegdhvf ltvsdggell
      541 trylpaaava mpplnralyl igytapvtse leglrligar iglpdlagrd evlarlrerg
      601 drdilgflga
//
LOCUS       WP_236004085             199 aa            linear   BCT 02-MAR-2025
DEFINITION  TetR family transcriptional regulator [Nonomuraea antri].
ACCESSION   WP_236004085
VERSION     WP_236004085.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea antri
  ORGANISM  Nonomuraea antri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012655.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00440.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Nonomuraea antri"
                     /db_xref="taxon:2730852"
     Protein         1..199
                     /product="TetR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=21901
     Region          17..195
                     /region_name="transcr_KstR"
                     /note="cholesterol catabolism transcriptional regulator
                     KstR; NF033703"
                     /db_xref="CDD:468143"
ORIGIN      
        1 meshpstpgg hsvrtrsqhq rrkrivqaaa alasrggvea mqmrtvaera gvalgtlyry
       61 fpskmdlvva vvgeeidlle ssierrppsa atpagravdv lmratrglmr epeladalir
      121 slimaevdtp fgdrmtglll rvaadgltye qaneeqlala gslssvwvhe llemlrgrrt
      181 ydqiqrriei asdrlfhdl
//
LOCUS       WP_236004204             153 aa            linear   BCT 02-MAR-2025
DEFINITION  SRPBCC family protein, partial [Nonomuraea antri].
ACCESSION   WP_236004204
VERSION     WP_236004204.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea antri
  ORGANISM  Nonomuraea antri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Iyer,L.M., Koonin,E.V. and Aravind,L.
  TITLE     Adaptations of the helix-grip fold for ligand binding and catalysis
            in the START domain superfamily
  JOURNAL   Proteins 43 (2), 134-144 (2001)
   PUBMED   11276083
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10604.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Nonomuraea antri"
                     /db_xref="taxon:2730852"
     Protein         <1..153
                     /product="SRPBCC family protein"
     Region          19..153
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(21,23,25,34..36,38..39,54,66,68,70,72,80,82,84,91,
                     93,103..104,106,108,114,116,118,120,132..136,138..139,
                     142..144,147)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176871"
ORIGIN      
        1 rprrtpslef vvdtmeglmr fetgvhvdap aqrvwqvmtd vaawpeftpt mtevrpldgg
       61 plavgarvri kqpkipplvw tvteltpyrs ftwaattggv ritaghvldg dttvtlsieq
      121 sgllspllal ftagrtrayv rteaeslkrr cet
//
LOCUS       WP_236004178              67 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6223 family protein, partial [Nonomuraea antri].
ACCESSION   WP_236004178
VERSION     WP_236004178.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea antri
  ORGANISM  Nonomuraea antri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
REFERENCE   1  (residues 1 to 67)
  AUTHORS   Braesel,J., Lee,J.H., Arnould,B., Murphy,B.T. and Eustaquio,A.S.
  TITLE     Diazaquinomycin Biosynthetic Gene Clusters from Marine and
            Freshwater Actinomycetes
  JOURNAL   J Nat Prod 82 (4), 937-946 (2019)
   PUBMED   30896942
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039381.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19733.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Nonomuraea antri"
                     /db_xref="taxon:2730852"
     Protein         <1..67
                     /product="DUF6223 family protein"
ORIGIN      
        1 llvgvvggvn gvvklavsdg glgtgngvfg aavaaalgla gaalgglals rsrrraeavp
       61 arshhta
//
LOCUS       WP_236004253             268 aa            linear   BCT 02-MAR-2025
DEFINITION  4Fe-4S binding protein, partial [Nonomuraea antri].
ACCESSION   WP_236004253
VERSION     WP_236004253.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea antri
  ORGANISM  Nonomuraea antri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012267.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00037.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Nonomuraea antri"
                     /db_xref="taxon:2730852"
     Protein         1..>268
                     /product="4Fe-4S binding protein"
     Region          <1..85
                     /region_name="PRK05888"
                     /note="NADH-quinone oxidoreductase subunit NuoI"
                     /db_xref="CDD:235637"
     Region          <132..>256
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
ORIGIN      
        1 mlcarecpdw ciyidshket ipapeggrpr qrnvldrfai dfalcmycgi cievcpfdal
       61 fwspefeyae gdirnllhek drlgawvqtv ppgkqdarpq arprpepppr vrrrrpapaa
      121 rrnsraptsr lppnahpari svrtrasvrt rasvrtltga parisvksgr rpgarrapna
      181 pktpaptnpr pqppawnpqs parrqrhrap avprttaqkp apkdrrtpla ltllpvaprp
      241 lprqgqrarp gasvpagrwp mfgasvpr
//
LOCUS       WP_236004260             218 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Heyndrickxia sporothermodurans].
ACCESSION   WP_236004260
VERSION     WP_236004260.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia sporothermodurans
  ORGANISM  Heyndrickxia sporothermodurans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Heyndrickxia sporothermodurans"
                     /db_xref="taxon:46224"
     Protein         1..218
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=23731
     Region          <1..209
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mletpsfkka leekelpklp fvsvfkhypk qvisgvfsnv ssdiafgvfa fytttygikf
       61 lgldksifvn atlvgaviav faislfgyls dkispkkilg fgnillilwa lpyfyllntk
      121 stgliflaii iafiihsimw aplapviaas fpahlrfsgs aitfmfrgli gggvaplist
      181 yllnkfdtgy aisgyiiiag vialialkfv dvkyhked
//
LOCUS       WP_236004481            1232 aa            linear   BCT 02-MAR-2025
DEFINITION  CARDB domain-containing protein [Amycolatopsis pittospori].
ACCESSION   WP_236004481
VERSION     WP_236004481.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis pittospori
  ORGANISM  Amycolatopsis pittospori
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019325.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07705.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1232
                     /organism="Amycolatopsis pittospori"
                     /db_xref="taxon:2749434"
     Protein         1..1232
                     /product="CARDB domain-containing protein"
                     /calculated_mol_wt=127449
     Region          54..175
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
     Region          179..635
                     /region_name="COG1572"
                     /note="Serine protease, subtilase family
                     [Posttranslational modification, protein turnover,
                     chaperones]"
                     /db_xref="CDD:441180"
     Region          637..799
                     /region_name="CBM6-CBM35-CBM36_like_1"
                     /note="uncharacterized members of the carbohydrate binding
                     module 6 (CBM6) and CBM35_like superfamily; cd14490"
                     /db_xref="CDD:271156"
     Region          813..1081
                     /region_name="Pectate_lyase_3"
                     /note="Pectate lyase superfamily protein; pfam12708"
                     /db_xref="CDD:403800"
     Region          1002..1197
                     /region_name="Beta_helix"
                     /note="Right handed beta helix region; pfam13229"
                     /db_xref="CDD:463811"
ORIGIN      
        1 mtrmrlsrli agflaaglsv aglslasaas gpppdlaaas sgpaalaevp ltrtvsasss
       61 lpgypvanav dgnqdsywes annafpqwiq adlgsaksls rivlklpsaw esrtqtltvr
      121 gstdgtaftd fgapagyaft pgantvtipv tasaryvrlq itantrwpaa qlsefelygp
      181 dtgdtqapsa panlaltepa pgqvrlawsa stdnvgvtgy tvyrdgtpvt titgttftet
      241 rpvgtrieyf vrakdaagnv sadsdhvvrs gttaganlaa gkpieatstv hsfvatnand
      301 nntatywesa agypnsltvk lganadvdsi vvkldpdtaw gartqnfevl greqgataft
      361 slsaradhrf dpatnqntvt ipvsgvasdv rlqfsansga pggqvaefqv lgtpapnpdl
      421 vvtgiswtpe nptetsqlav satvknngta naaattasvs vggtvvgdaa vgaltagast
      481 tvtvsagtrp qgtysvsatv dpagkvaeqd dtnntftspt slviaqspgp dlevtgitsn
      541 psnpavgaav sftvavhnrg tsgagasvtr ltvggatltg atgaiaagat anvaisgtwt
      601 aanggatlaa tadstnlvte tnesnnglsr aivvgrgaav pyvgyeaeaa qyqgqllead
      661 plrtfghtnf atessgrksv rlasqgqyve ftstnqansi vvrnsipdap ggggqdatis
      721 lyvngtfaqk ltlsskhswl ygstddpegl tntpqanarr lfdeshalla qsyppgtkfk
      781 lqrdsgdtaa fyivdtidle qvapasekpa nctsiteyga vpndgnddst aiqravtddq
      841 ngviacvwip agqwrqekki ltddpnvpng ggqynqigis nvtirgagmw hsqlysltep
      901 qnagginhph egnfgfdidk ntqisdiaif gsgrirggdg naeggvglng rfgtgtkisn
      961 vwiehanvga wvgrdysnip slwgpadgle fsgmrirnty adginftngs rnsrvfnssf
     1021 rttgddalav wanqyvkdts qdvahdnvfa nntiqlpwra ngiaiyggyg nkiennivsd
     1081 tmnypgimla tdhdplpfsg qtliannaly rcggvfwned qefgaitffa qgkditgvtl
     1141 rdteihdsty dgiqfktggg tmnvavtnvk idksnngagi lamsgargta tlsnvtitns
     1201 gtgdivtqpg sqfvitggqv pavvstgrrg tr
//
LOCUS       WP_236004898             145 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Nonomuraea antri].
ACCESSION   WP_236004898
VERSION     WP_236004898.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea antri
  ORGANISM  Nonomuraea antri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
REFERENCE   1  (residues 1 to 145)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Nonomuraea antri"
                     /db_xref="taxon:2730852"
     Protein         <1..145
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <29..133
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 papavvaptp egrvpewpsa aetredpgie lrelagetwi eaapqgrptl latacaaagf
       61 tprtglrvae wsgkfgfvaa glgvtlvpel aaravpadvv lrplragqap artvyaalpe
      121 valpaalalv emlgqwevct tvspt
//
LOCUS       WP_236004990              25 aa            linear   BCT 02-MAR-2025
DEFINITION  SPFH domain-containing protein, partial [Nonomuraea antri].
ACCESSION   WP_236004990
VERSION     WP_236004990.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea antri
  ORGANISM  Nonomuraea antri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024813.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13421.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..25
                     /organism="Nonomuraea antri"
                     /db_xref="taxon:2730852"
     Protein         1..>25
                     /product="SPFH domain-containing protein"
     Region          1..>25
                     /region_name="SPFH_like"
                     /note="core domain of the SPFH (stomatin, prohibitin,
                     flotillin, and HflK/C) superfamily; cl19107"
                     /db_xref="CDD:473137"
ORIGIN      
        1 mgarlvvres qvavfvnegq ladaf
//
LOCUS       WP_236005101             121 aa            linear   BCT 02-MAR-2025
DEFINITION  Na+/H+ antiporter NhaA, partial [Nonomuraea antri].
ACCESSION   WP_236005101
VERSION     WP_236005101.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea antri
  ORGANISM  Nonomuraea antri
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
REFERENCE   1  (residues 1 to 121)
  AUTHORS   Karpel,R., Alon,T., Glaser,G., Schuldiner,S. and Padan,E.
  TITLE     Expression of a sodium proton antiporter (NhaA) in Escherichia coli
            is induced by Na+ and Li+ ions
  JOURNAL   J Biol Chem 266 (32), 21753-21759 (1991)
   PUBMED   1657980
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06965.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Nonomuraea antri"
                     /db_xref="taxon:2730852"
     Protein         1..>121
                     /product="Na+/H+ antiporter NhaA"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /GO_process="GO:0006885 - regulation of pH [Evidence IEA]"
     Region          19..>121
                     /region_name="Na_H_Exchanger"
                     /note="Sodium/hydrogen exchanger family; cl01133"
                     /db_xref="CDD:470090"
ORIGIN      
        1 mrtekwpfap tvryartlae alrtetiggv imliatvaal iwantsldty talretplgp
       61 lelykwaqng lltifffvag levkeefvhg elsnlrkaal piiaslagmv vpavvylais
      121 w
//
LOCUS       WP_236005260             169 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Amycolatopsis pittospori].
ACCESSION   WP_236005260
VERSION     WP_236005260.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis pittospori
  ORGANISM  Amycolatopsis pittospori
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Amycolatopsis pittospori"
                     /db_xref="taxon:2749434"
     Protein         1..169
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=17333
     Region          21..>163
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 migrdneeri tpalwemasi ltlggflsmf tstvvnvalg aiaakldapl ataqwiatgy
       61 llalaamvpv sgwasrrfga trlwlvcvgl faafsslcam atsiealivf rvlqgaaggl
      121 lvpagqilfa maagpkrlgr mmtvlsipis lapvlgtlsg sllaaglsr
//
LOCUS       WP_236005352             159 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6130 family protein [Amycolatopsis pittospori].
ACCESSION   WP_236005352
VERSION     WP_236005352.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis pittospori
  ORGANISM  Amycolatopsis pittospori
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039665.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19625.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Amycolatopsis pittospori"
                     /db_xref="taxon:2749434"
     Protein         1..159
                     /product="DUF6130 family protein"
                     /calculated_mol_wt=16432
     Region          42..159
                     /region_name="DUF6130"
                     /note="Family of unknown function (DUF6130); pfam19625"
                     /db_xref="CDD:437457"
ORIGIN      
        1 mpslgklafa ltaavlaaac ssappppaea apvpaaaadw spapvvplps qprpslvvda
       61 plpeqlamgl vvlryraenl rivpvygpaa ldvsprighi hvtvddapwh wadgsgepli
      121 lqslpagphk vwigladpth kildekavnf vvpvqsghh
//
LOCUS       WP_236005471             182 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Amycolatopsis pittospori].
ACCESSION   WP_236005471
VERSION     WP_236005471.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis pittospori
  ORGANISM  Amycolatopsis pittospori
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025052.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13671.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Amycolatopsis pittospori"
                     /db_xref="taxon:2749434"
     Protein         1..182
                     /product="AAA family ATPase"
                     /calculated_mol_wt=19880
     Region          1..128
                     /region_name="COG4639"
                     /note="Predicted kinase [General function prediction
                     only]"
                     /db_xref="CDD:443677"
ORIGIN      
        1 mprlivlngp pacgkstlar ryaddrpltl nldidrvrgl lgawqddaak agrlardlav
       61 saarthltag hdvivpqylg rtdflrrlea laertgaefh eivlldtken alrrfadrtr
      121 aaaepehvea aetlrrsggr dhlaemydri vavvaerpra kvvrtdagqi seayqgllaa
      181 lg
//
LOCUS       WP_236005595             310 aa            linear   BCT 02-MAR-2025
DEFINITION  ricin-type beta-trefoil lectin domain protein [Amycolatopsis
            pittospori].
ACCESSION   WP_236005595
VERSION     WP_236005595.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis pittospori
  ORGANISM  Amycolatopsis pittospori
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012859.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00652.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Amycolatopsis pittospori"
                     /db_xref="taxon:2749434"
     Protein         1..310
                     /product="ricin-type beta-trefoil lectin domain protein"
                     /calculated_mol_wt=32577
     Region          <2..177
                     /region_name="XynC"
                     /note="O-Glycosyl hydrolase [Cell wall/membrane/envelope
                     biogenesis]; COG5520"
                     /db_xref="CDD:444271"
     Region          185..308
                     /region_name="beta-trefoil_Ricin_laminarinase"
                     /note="ricin B-type lectin domain, beta-trefoil fold,
                     found in glucan endo-1,3-beta-glucosidase and similar
                     proteins; cd23451"
                     /db_xref="CDD:467329"
     Site            order(198..201,211,213,216,220..221)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467329"
     Site            order(239..242,252,254,257,261..262)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467329"
     Site            order(282..285,295,297,300,304..305)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467329"
ORIGIN      
        1 mawhgyggdv aqqttvhnry pnvpaysteh sggtwvshqq aedmanivdy trnwsksfik
       61 wslaldqnmg phnggcgtct glitvhngds rhgqvdytve yytmghltkf vkpgayriss
      121 ndnsavrnva wknpdgskal iayntsgasq nvrvnwggqs faytlpasts atftwagtqs
      181 gggvrtgait glggkcvdva gansangtpv qlydcngsga qqwsfqadgt vrslgkcldv
      241 tgmstadgaq lqlwdcagga nqrwaanaar dlansgsgkc ldatgntsan gtrlqiwact
      301 gatnqkwttp
//
LOCUS       WP_236005403              98 aa            linear   BCT 02-MAR-2025
DEFINITION  dsRBD fold-containing protein [Amycolatopsis pittospori].
ACCESSION   WP_236005403
VERSION     WP_236005403.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis pittospori
  ORGANISM  Amycolatopsis pittospori
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
REFERENCE   1  (residues 1 to 98)
  AUTHORS   Bunker,R.D., Mandal,K., Bashiri,G., Chaston,J.J., Pentelute,B.L.,
            Lott,J.S., Kent,S.B. and Baker,E.N.
  TITLE     A functional role of Rv1738 in Mycobacterium tuberculosis
            persistence suggested by racemic protein crystallography
  JOURNAL   Proc Natl Acad Sci U S A 112 (14), 4310-4315 (2015)
   PUBMED   25831534
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020532.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08962.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Amycolatopsis pittospori"
                     /db_xref="taxon:2749434"
     Protein         1..98
                     /product="dsRBD fold-containing protein"
                     /calculated_mol_wt=10242
     Region          7..86
                     /region_name="Rv2632c-like"
                     /note="pfam08962"
                     /db_xref="CDD:430346"
ORIGIN      
        1 mtddtgkwti dvalqhgpyr vraeallrld dggefvgvgm ahiglressi sqvgsylava
       61 ralsdltael letvasdvda evsravevdg iltaqstn
//
LOCUS       WP_236005660             439 aa            linear   BCT 02-MAR-2025
DEFINITION  neutral zinc metallopeptidase, partial [Amycolatopsis pittospori].
ACCESSION   WP_236005660
VERSION     WP_236005660.1
KEYWORDS    RefSeq.
SOURCE      Amycolatopsis pittospori
  ORGANISM  Amycolatopsis pittospori
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016143.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04228.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Amycolatopsis pittospori"
                     /db_xref="taxon:2749434"
     Protein         <1..439
                     /product="neutral zinc metallopeptidase"
     Region          <246..435
                     /region_name="Zn_peptidase"
                     /note="Putative neutral zinc metallopeptidase; cl19825"
                     /db_xref="CDD:473215"
ORIGIN      
        1 ppgrpgqpgp gqpgqqgqqg pgrpgpqgpg gppisqptpi pppfrpgppt ggmplpppga
       61 aplpppriga pmpyqpgavg ppqlpygprf aqpafapygg yhqkksnggv iaavaivavm
      121 avmgglimvi aiansggshh vadasysssp ytttssydss tttssetstt ttgsrdstgt
      181 qetstgssre tsasrtpsgp qaqhkladnp lwlnsnvglp nqacnlsrwa snpdasaaff
      241 esarpcldnv wkqvmdyskl pfrvptvkyp sgknwsspcg dasngavaaf ycsqnetlym
      301 pyeglqanqy gnrpgvylav faheyahhvq alsgvmeayw darydagvds aaglemsrrn
      361 elsaqclsgt flgstvgrgg svnqamyrda wesqdrgdhn ggprdhgsda havswwqhga
      421 qknriaqcnt waanssdvs
//
LOCUS       WP_236005671             306 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Mammaliicoccus
            vitulinus].
ACCESSION   WP_236005671
VERSION     WP_236005671.1
KEYWORDS    RefSeq.
SOURCE      Mammaliicoccus vitulinus
  ORGANISM  Mammaliicoccus vitulinus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Mammaliicoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025846.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14493.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Mammaliicoccus vitulinus"
                     /db_xref="taxon:71237"
     Protein         1..306
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=36492
     Region          6..293
                     /region_name="YpbB"
                     /note="Uncharacterized conserved protein YpbB, contains
                     C-terminal HTH domain [Function unknown]; COG4955"
                     /db_xref="CDD:443982"
ORIGIN      
        1 mkhenktyks iyniltgkkt hqtyfdatie hlklyygclp nlkyadfekv veqqinkdlk
       61 pivgdyfyhq atqtvgtlll liqmvsqrkh ehfsyqpiin dktiqfkake lyisikddse
      121 nqfitevhhl fedmnqffne iyvhyllagy retpytteqi alledisiik lkahlveeyq
      181 fiqvtlqned kypilsqikf mpklhqqtlt tyqllnqtyd ietlarlknv kshtihdhvi
      241 emyikgyltd knkyidddkf lkfvkafedk pnqnlkyyye algeftyfei klmyviyame
      301 glnvtq
//
LOCUS       WP_236005742             708 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4347 domain-containing protein, partial [Heliomicrobium gestii].
ACCESSION   WP_236005742
VERSION     WP_236005742.1
KEYWORDS    RefSeq.
SOURCE      Heliomicrobium gestii
  ORGANISM  Heliomicrobium gestii
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Heliobacteriaceae; Heliomicrobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025611.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14252.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Heliomicrobium gestii"
                     /db_xref="taxon:2699"
     Protein         1..>708
                     /product="DUF4347 domain-containing protein"
     Region          60..207
                     /region_name="DUF4347"
                     /note="Domain of unknown function (DUF4347); pfam14252"
                     /db_xref="CDD:433811"
     Region          478..>661
                     /region_name="Chi1"
                     /note="Chitinase [Carbohydrate transport and metabolism];
                     COG3469"
                     /db_xref="CDD:442692"
ORIGIN      
        1 mldeggkkvr nlnhtrprng tsastnrvvr kiisfiaift llisnlyvlp gyafsgprei
       61 vfidnnvddy qtladgvgne aevhildaak dglaqmanil sgrsdidalh vlshgaaaav
      121 elgalrltee tlpdhindlk nigsalrpgg dvlfygcnia egekgrkfia dvaaaigrdv
      181 aasddrtgss dkkgnwqlea atgdistksl svqkwkgdla idtthlignf ystvpgeglt
      241 ggvtvandnd whtytltfta teantaisfl frnepsaffv ddfsvkrvgd ntellinggm
      301 ekgvvtgtll ndkpsqpkdw sligtptvna ggavyndlhk idesdpneip tipyaktglf
      361 ywmdgamggf dgiqqviptq igqtytlsfa lknagawngt qadttgvsng ditqvlvyag
      421 glpggftvtp apvewlssva gqtagsaggg dgssagsait wdvnvgeakg slslsdiaaa
      481 pgatvnlysn aafttevtgs dtialtggga ttayirvtsq dtstvsyyav tihrpassna
      541 gltsvagqtg tpgggtgada shpitwsvnv agakgtlsta diavapdatf klfsnagyta
      601 evtgsntitl tdggattayi kvtaqdttta kyyavtinra asdstpptvt vsggtvtigq
      661 tvtaqsneng wlylapsgsa vtdkasldal vsggtatkvs atansdaa
//
LOCUS       WP_236005834             116 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3397 family protein [Desemzia sp. RIT 804].
ACCESSION   WP_236005834
VERSION     WP_236005834.1
KEYWORDS    RefSeq.
SOURCE      Desemzia sp. RIT 804
  ORGANISM  Desemzia sp. RIT 804
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Desemzia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023305.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11877.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Desemzia sp. RIT 804"
                     /db_xref="taxon:2810209"
     Protein         1..116
                     /product="DUF3397 family protein"
                     /calculated_mol_wt=13316
     Region          1..112
                     /region_name="DUF3397"
                     /note="Protein of unknown function (DUF3397); pfam11877"
                     /db_xref="CDD:432154"
ORIGIN      
        1 mlivlfllpv vlfvfcnkkv nrhfmkqqlt vkmadllvpy lvvgihviss ltlgmslfpy
       61 flififtlai illlylavkk geilyskffk swwrfvflss ivtyyglvat niitsi
//
LOCUS       WP_236005861             142 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Desemzia sp. RIT 804].
ACCESSION   WP_236005861
VERSION     WP_236005861.1
KEYWORDS    RefSeq.
SOURCE      Desemzia sp. RIT 804
  ORGANISM  Desemzia sp. RIT 804
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Desemzia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017416.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05598.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Desemzia sp. RIT 804"
                     /db_xref="taxon:2810209"
     Protein         1..142
                     /product="transposase"
                     /calculated_mol_wt=16248
     Region          2..142
                     /region_name="COG3666"
                     /note="Transposase, IS1182 family [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:442883"
ORIGIN      
        1 mpielsclls pshiifeihe fiesldnslf sqldssegrp gyhprllika llfaysegiy
       61 sgrkiekmtt eniammwavs nevisyrtin rfrfsgtcqk llpelfteft vklkienlis
      121 mnelfidgtk ieanankysf vr
//
LOCUS       WP_236005902              63 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Desemzia sp. RIT 804].
ACCESSION   WP_236005902
VERSION     WP_236005902.1
KEYWORDS    RefSeq.
SOURCE      Desemzia sp. RIT 804
  ORGANISM  Desemzia sp. RIT 804
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Desemzia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..63
                     /organism="Desemzia sp. RIT 804"
                     /db_xref="taxon:2810209"
     Protein         1..63
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=7648
     Region          3..>62
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(4..6,20,37..39)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133384"
ORIGIN      
        1 mfytvqemat tlsmnahtir yytnqdwith lkrdensyrk fdeesinwli iiyylrqygm
       61 tig
//
LOCUS       WP_236006501             478 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Nakamurella leprariae].
ACCESSION   WP_236006501
VERSION     WP_236006501.1
KEYWORDS    RefSeq.
SOURCE      Nakamurella leprariae
  ORGANISM  Nakamurella leprariae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Nakamurellales;
            Nakamurellaceae; Nakamurella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Nakamurella leprariae"
                     /db_xref="taxon:2803911"
     Protein         1..478
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=49055
     Region          29..478
                     /region_name="PRK10504"
                     /note="putative transporter; Provisional"
                     /db_xref="CDD:182502"
ORIGIN      
        1 mnledgtsma atpappappq rfsralallv agclfmelld ativtpaipv iagdlgvaav
       61 dlnvlitays lsvavlipls gyladrlgar rvfltavvvf vlasvgcala gdlatltaar
      121 vlqgvggamm vpvgrlvvlr stsktdlvra iafltwpalv apvvapavgg llaqsvgwew
      181 iflinvplgm ialavgwrvi pglpavrglr ldwlgfvlla agvaalvlgl etlgagsldn
      241 paawaslaga avllgaavrh lrraaepllr lrilriatfr ftaaggtvyr avvqaipfll
      301 pllfqlafgw spaqaglmvi avfvgnigik pvttplmrrf girtvvvgac iggavclvam
      361 aflprdtplw vialllvcsg afrsigfsgy ntaafadvap delrsantln atlqelgtgl
      421 giaigalalr lgdtiagsps stvafatafg vmavllvvpt vealrlpasa arhvtdvr
//
LOCUS       WP_236006525              88 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Nakamurella leprariae].
ACCESSION   WP_236006525
VERSION     WP_236006525.1
KEYWORDS    RefSeq.
SOURCE      Nakamurella leprariae
  ORGANISM  Nakamurella leprariae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Nakamurellales;
            Nakamurellaceae; Nakamurella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039648.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19575.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Nakamurella leprariae"
                     /db_xref="taxon:2803911"
     Protein         1..88
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=9181
     Region          19..85
                     /region_name="HTH_58"
                     /note="Helix-turn-helix domain; pfam19575"
                     /db_xref="CDD:437407"
ORIGIN      
        1 maaetgpnga gkpgrnstkt aplkkgarit gvareklaae lskkyekgqs irslaeatgr
       61 sygfvhrlll dsdvtlrgrg gatrskkk
//
LOCUS       WP_236006843              70 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Nakamurella leprariae].
ACCESSION   WP_236006843
VERSION     WP_236006843.1
KEYWORDS    RefSeq.
SOURCE      Nakamurella leprariae
  ORGANISM  Nakamurella leprariae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Nakamurellales;
            Nakamurellaceae; Nakamurella.
REFERENCE   1  (residues 1 to 70)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 70)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02771.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Nakamurella leprariae"
                     /db_xref="taxon:2803911"
     Protein         1..70
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=7561
     Region          6..>52
                     /region_name="Acyl-CoA_dh_N"
                     /note="Acyl-CoA dehydrogenase, N-terminal domain;
                     pfam02771"
                     /db_xref="CDD:460686"
ORIGIN      
        1 mdlefsdeha elravvrqfa raevapviga lyergefpya ivrrmgamgl fghppvvvrr
       61 rpgagrpsag
//
LOCUS       WP_236006977              67 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6412 domain-containing protein [Clavibacter zhangzhiyongii].
ACCESSION   WP_236006977
VERSION     WP_236006977.1
KEYWORDS    RefSeq.
SOURCE      Clavibacter zhangzhiyongii
  ORGANISM  Clavibacter zhangzhiyongii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Clavibacter.
REFERENCE   1  (residues 1 to 67)
  AUTHORS   Kudo,F., Tsunoda,T., Takashima,M. and Eguchi,T.
  TITLE     Five-Membered Cyclitol Phosphate Formation by a myo-Inositol
            Phosphate Synthase Orthologue in the Biosynthesis of the
            Carbocyclic Nucleoside Antibiotic Aristeromycin
  JOURNAL   Chembiochem 17 (22), 2143-2148 (2016)
   PUBMED   27577857
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039759.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19950.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Clavibacter zhangzhiyongii"
                     /db_xref="taxon:2768071"
     Protein         1..67
                     /product="DUF6412 domain-containing protein"
                     /calculated_mol_wt=6556
ORIGIN      
        1 maaavalvri aaargllgsa applrpdeea dlpvlvsssd pdadghersr apgrpvqvvv
       61 paplaaa
//
LOCUS       WP_236007077             409 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase domain-containing protein [Clavibacter
            zhangzhiyongii].
ACCESSION   WP_236007077
VERSION     WP_236007077.1
KEYWORDS    RefSeq.
SOURCE      Clavibacter zhangzhiyongii
  ORGANISM  Clavibacter zhangzhiyongii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Clavibacter.
REFERENCE   1  (residues 1 to 409)
  AUTHORS   Dang,G., Chen,L., Li,Z., Deng,X., Cui,Y., Cao,J., Yu,S., Pang,H.
            and Liu,S.
  TITLE     Expression, Purification and Characterisation of Secreted Esterase
            Rv2525c from Mycobacterium tuberculosis
  JOURNAL   Appl Biochem Biotechnol 176 (1), 1-12 (2015)
   PUBMED   25869294
REFERENCE   2  (residues 1 to 409)
  AUTHORS   Bellinzoni,M., Haouz,A., Miras,I., Magnet,S., Andre-Leroux,G.,
            Mukherjee,R., Shepard,W., Cole,S.T. and Alzari,P.M.
  TITLE     Structural studies suggest a peptidoglycan hydrolase function for
            the Mycobacterium tuberculosis Tat-secreted protein Rv2525c
  JOURNAL   J Struct Biol 188 (2), 156-164 (2014)
   PUBMED   25260828
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08924.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Clavibacter zhangzhiyongii"
                     /db_xref="taxon:2768071"
     Protein         1..409
                     /product="glycoside hydrolase domain-containing protein"
                     /calculated_mol_wt=43191
     Region          <134..185
                     /region_name="PGRP"
                     /note="Peptidoglycan-binding (PGRP) domain of
                     peptidoglycan hydrolases [Cell wall/membrane/envelope
                     biogenesis]; COG3409"
                     /db_xref="CDD:442635"
     Region          183..395
                     /region_name="GH25_BacA-like"
                     /note="BacA is a bacterial lysin from Enterococcus
                     faecalis that degrades bacterial cell walls by catalyzing
                     the hydrolysis of 1,4-beta-linkages between
                     N-acetylmuramic acid and N-acetyl-D-glucosamine residues.
                     BacA is homologous to the YbfG and YkuG lysins of...;
                     cd06418"
                     /db_xref="CDD:119380"
     Site            order(198,222,254,256,295,297,332,351,372,391)
                     /site_type="active"
                     /db_xref="CDD:119380"
ORIGIN      
        1 mnlsrrsvlg galaavpvtl laagpvhade aapaapatpa saplasngrp ivreiqqqlv
       61 arygtragfp vvttdgvwtg dahkalihal qleigiaett angafgpltr atlqkqpals
      121 vgstdttgyl ghllqaslvv mstwdgpvdg rfsseqatrl sqfqrtvalp etgvgdyrtw
      181 aallasngdp trpgaavdgi tvidaarakt lrdagftvvg ryltdsdrpd alakriqdge
      241 lqaifagglk vfpifqeggt dttyfsydlg vraagravda atrlgflpgt viyyaidfda
      301 rptevetylq pyfrgihael krrgsayrvg vyagrrican laaahltels yvadmstgwg
      361 anlgaripen wafdqilehs vgegdqafdv dtnvvsgrdp gqsrvqprg
//
LOCUS       WP_236007104             572 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin-dependent oxidoreductase [Nakamurella leprariae].
ACCESSION   WP_236007104
VERSION     WP_236007104.1
KEYWORDS    RefSeq.
SOURCE      Nakamurella leprariae
  ORGANISM  Nakamurella leprariae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Nakamurellales;
            Nakamurellaceae; Nakamurella.
REFERENCE   1  (residues 1 to 572)
  AUTHORS   Kisker,C., Schindelin,H., Pacheco,A., Wehbi,W.A., Garrett,R.M.,
            Rajagopalan,K.V., Enemark,J.H. and Rees,D.C.
  TITLE     Molecular basis of sulfite oxidase deficiency from the structure of
            sulfite oxidase
  JOURNAL   Cell 91 (7), 973-983 (1997)
   PUBMED   9428520
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012401.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00174.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Nakamurella leprariae"
                     /db_xref="taxon:2803911"
     Protein         1..572
                     /product="molybdopterin-dependent oxidoreductase"
                     /calculated_mol_wt=58606
     Region          281..562
                     /region_name="SO_family_Moco"
                     /note="Sulfite oxidase (SO) family, molybdopterin binding
                     domain. This molybdopterin cofactor (Moco) binding domain
                     is found in a variety of oxidoreductases, main members of
                     this family are nitrate reductase (NR) and sulfite oxidase
                     (SO). SO catalyzes the...; cl00199"
                     /db_xref="CDD:469652"
     Site            order(283,285,287,333,383,413,418,426,429,432..433)
                     /site_type="active"
                     /note="Moco binding site [active]"
                     /db_xref="CDD:238198"
     Site            333
                     /site_type="other"
                     /note="metal coordination site [ion binding]"
                     /db_xref="CDD:238198"
ORIGIN      
        1 mpgraaavgl glaavaltlg vaelvaaggq avglfgpaaa plsalgagfi dltpgwlkdl
       61 avswfgvhdk talrvgmgvv lvlaaavigl igrrspriaa avaagllvva avavltrada
      121 aafdlapliv ggtaglwlll sawrrtalpp dvlaaarrrs addgpvwsdd pdgstaagpp
      181 agpgprdrgg rvvltgdrhp mgpvagaggg tgvdrrqflr lagsgavvav lagavsrlip
      241 sgadvaasra afglpvagdl lpvpgtpldv pglasfitpn adfyridtaf tvprmttadw
      301 rlnvhglvds pfeltfdelv vmpsvertit ltcvsnevgg dligtarwqg vriadvlara
      361 gvrtadgpqg gpdcvlstsv dgftvttplq altdgrdall aygmngeplp qehgfpvrmv
      421 vpglygyvsa tkwvvdlavt rfervsafws drgwaeegpi klssridvpr plepvpagev
      481 tiagvawaqh igvaavqvqi dggdwqdael sdagtadtwr qwvyrwvdap agehwlrcra
      541 tdaagtvqta dvappapdgs tgldavkliv sp
//
LOCUS       WP_236006897             233 aa            linear   BCT 02-MAR-2025
DEFINITION  toxin-antitoxin system HicB family antitoxin [Nakamurella
            leprariae].
ACCESSION   WP_236006897
VERSION     WP_236006897.1
KEYWORDS    RefSeq.
SOURCE      Nakamurella leprariae
  ORGANISM  Nakamurella leprariae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Nakamurellales;
            Nakamurellaceae; Nakamurella.
REFERENCE   1  (residues 1 to 233)
  AUTHORS   Mhlanga-Mutangadura,T., Morlin,G., Smith,A.L., Eisenstark,A. and
            Golomb,M.
  TITLE     Evolution of the major pilus gene cluster of Haemophilus influenzae
  JOURNAL   J Bacteriol 180 (17), 4693-4703 (1998)
   PUBMED   9721313
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017355.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05534.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Nakamurella leprariae"
                     /db_xref="taxon:2803911"
     Protein         1..233
                     /product="toxin-antitoxin system HicB family antitoxin"
                     /calculated_mol_wt=23683
     Region          <153..210
                     /region_name="HicB"
                     /note="Predicted nuclease of the RNAse H fold, HicB family
                     [General function prediction only]; COG4226"
                     /db_xref="CDD:443370"
ORIGIN      
        1 msdttggvtl vamdltpyvn dlrndllata avgteevrrt aavlatsves aarlaimhal
       61 sdlaaeitgr lpegsvdlrl dgrevrvtvs glptagtgda aghtsasata tswaqrfgwt
      121 ksgpagggth vggttaadgt aatdagdpdg hlstpeelrr avqdaggels rttvrlfnel
      181 ksqaeraaad qgvslntyis ravsdsvrss vpgrrpdrpd gaqgntvtgh vhs
//
LOCUS       WP_236007219             312 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin-dependent oxidoreductase, partial [Clavibacter
            zhangzhiyongii].
ACCESSION   WP_236007219
VERSION     WP_236007219.1
KEYWORDS    RefSeq.
SOURCE      Clavibacter zhangzhiyongii
  ORGANISM  Clavibacter zhangzhiyongii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Clavibacter.
REFERENCE   1  (residues 1 to 312)
  AUTHORS   Kisker,C., Schindelin,H., Pacheco,A., Wehbi,W.A., Garrett,R.M.,
            Rajagopalan,K.V., Enemark,J.H. and Rees,D.C.
  TITLE     Molecular basis of sulfite oxidase deficiency from the structure of
            sulfite oxidase
  JOURNAL   Cell 91 (7), 973-983 (1997)
   PUBMED   9428520
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012401.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00174.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Clavibacter zhangzhiyongii"
                     /db_xref="taxon:2768071"
     Protein         <1..312
                     /product="molybdopterin-dependent oxidoreductase"
     Region          5..284
                     /region_name="SO_family_Moco"
                     /note="Sulfite oxidase (SO) family, molybdopterin binding
                     domain. This molybdopterin cofactor (Moco) binding domain
                     is found in a variety of oxidoreductases, main members of
                     this family are nitrate reductase (NR) and sulfite oxidase
                     (SO). SO catalyzes the...; cl00199"
                     /db_xref="CDD:469652"
     Site            order(5,7,9,55,99,130,135,143,146,149..150)
                     /site_type="active"
                     /note="Moco binding site [active]"
                     /db_xref="CDD:238198"
     Site            55
                     /site_type="other"
                     /note="metal coordination site [ion binding]"
                     /db_xref="CDD:238198"
ORIGIN      
        1 padafyridt alqvpsvdaa swrlritgmv eeeveisfae llalpleehv ttltcvsnev
       61 ggnlignalw lgypirllle rarptagadm vlstsqdgwt astplealtd pdrasilavg
      121 mngeplpqqh gfpvrmvvpg lygyvsatkw vtelkvttfa edvaywstrg wtergpiktg
      181 sridtprsgv rvdagrvava gmawaqhtgi qrvevrvdeg dwveatlgdg vgadtwrqws
      241 yawdatsgsh rvevratdtt gatqtsdeap papdgatgwh gitvsrrlsr pgplarvaaa
      301 grsspdarsr ra
//
LOCUS       WP_236007268             551 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Clavibacter
            zhangzhiyongii].
ACCESSION   WP_236007268
VERSION     WP_236007268.1
KEYWORDS    RefSeq.
SOURCE      Clavibacter zhangzhiyongii
  ORGANISM  Clavibacter zhangzhiyongii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Clavibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10170721
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Clavibacter zhangzhiyongii"
                     /db_xref="taxon:2768071"
     Protein         1..551
                     /product="ABC transporter substrate-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=58031
     Region          33..530
                     /region_name="PBP2_clavulanate_OppA2"
                     /note="The substrate-binding domain of an oligopeptide
                     binding protein (OppA2) from the biosynthesis pathway of
                     the beta-lactamase inhibitor clavulanic acid contains the
                     type 2 periplasmic binding fold; cd08506"
                     /db_xref="CDD:173871"
     Site            order(51,53,56,391,425,441..442)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:173871"
ORIGIN      
        1 malaaslalt scagagggga sgdvtgpadt ggtmqvlqst dfshldpemg ydtgvqnlyr
       61 liyrtlttss gkdgatiapd latdtgtpne datvwtftlk dglkfedgsp itsqsvkfgv
      121 ersfdpalai gtpytrlyla ggdtykgpye sgdlasietp dertivfhln rsvpefasva
      181 aqstftpfpv dedkvtvtsm dqqpiasgpy rvtartagss ltlarnpewd patdevrtak
      241 pdgwqftigl dqatiderml agqgddkdai agaitaasvs riqtpaikar tvsgdfgctt
      301 ylglnttkph lddlrvrqai ayavdkksla dvaggpmlas pastmltpti pghkdfdlya
      361 stdsagdvdk akallaeagl pdgftmtldv rnlptaqkqa ealqqslaka gitlelniid
      421 tatyyetigt psqqhdaavt gwcpdwrsas tvlptlfdgr qisekgnndi aqlndpavna
      481 kidevsamtd leaaktawge ldeqiqelap tvpllfgqtv mvvgqdvrna ysnplwaggi
      541 dfatiglhtg k
//
LOCUS       WP_236007696             285 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4097 family beta strand repeat-containing protein [Nakamurella
            leprariae].
ACCESSION   WP_236007696
VERSION     WP_236007696.1
KEYWORDS    RefSeq.
SOURCE      Nakamurella leprariae
  ORGANISM  Nakamurella leprariae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Nakamurellales;
            Nakamurellaceae; Nakamurella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024743.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13349.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Nakamurella leprariae"
                     /db_xref="taxon:2803911"
     Protein         1..285
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /calculated_mol_wt=27839
     Region          <141..>282
                     /region_name="YvlB"
                     /note="Uncharacterized conserved protein YvlB, contains
                     DUF4097 and DUF4098 domains [Function unknown]; COG3595"
                     /db_xref="CDD:442814"
ORIGIN      
        1 mtqeapagpa grpvgtgrdd apgstpkpkl pllpialgag aagaltvall aglvlsivpa
       61 whsstsavaa vlsgnelris adradvvlvp asaenesadt avaqlrgrys vhqptvtasy
      121 dgevtdftvn cpsqqqcegt vtvavpsgvq vsvattagai taqgmpnelq lgsqlgaitv
      181 tapaealias ttsgnvvitd aasdavavqt asgtvtasfv eepsllgvtt ysgtvdlala
      241 ggpyavdttg vraplditva ttesaaasrv vvvsttgavt lraag
//
LOCUS       WP_236008121             241 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Levilactobacillus andaensis].
ACCESSION   WP_236008121
VERSION     WP_236008121.1
KEYWORDS    RefSeq.
SOURCE      Levilactobacillus andaensis
  ORGANISM  Levilactobacillus andaensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
REFERENCE   1  (residues 1 to 241)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 241)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025054.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13673.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Levilactobacillus andaensis"
                     /db_xref="taxon:2799570"
     Protein         1..241
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=27293
     Region          1..150
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
     Site            order(83..85,95..96)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
ORIGIN      
        1 mdlkaycadd ldsvlclfre tvtrvncrey speqiaawlg pvtddvrakw qasllqhqty
       61 lawlgntvvg fadmaatgyl drlyvsadhq gegiatklvt tlmqavpmav yttdasitar
      121 pffeaqgfhv tkqnvvvrne islinftmkk nrrekrlnla dkevtqlekm kiiglfrkeg
      181 ftgeyesfqr vsgtdreffv vmsneqgika lfraslmlna vefqyvlddk htfvmkddea
      241 s
//
LOCUS       WP_236008139              94 aa            linear   BCT 02-MAR-2025
DEFINITION  holin [Levilactobacillus andaensis].
ACCESSION   WP_236008139
VERSION     WP_236008139.1
KEYWORDS    RefSeq.
SOURCE      Levilactobacillus andaensis
  ORGANISM  Levilactobacillus andaensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
REFERENCE   1  (residues 1 to 94)
  AUTHORS   Grundling,A., Manson,M.D. and Young,R.
  TITLE     Holins kill without warning
  JOURNAL   Proc Natl Acad Sci U S A 98 (16), 9348-9352 (2001)
   PUBMED   11459934
REFERENCE   2  (residues 1 to 94)
  AUTHORS   Loessner,M.J., Wendlinger,G. and Scherer,S.
  TITLE     Heterogeneous endolysins in Listeria monocytogenes bacteriophages:
            a new class of enzymes and evidence for conserved holin genes
            within the siphoviral lysis cassettes
  JOURNAL   Mol Microbiol 16 (6), 1231-1241 (1995)
   PUBMED   8577256
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018631.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06946.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Levilactobacillus andaensis"
                     /db_xref="taxon:2799570"
     Protein         1..94
                     /product="holin"
                     /calculated_mol_wt=9991
ORIGIN      
        1 mdyiqqlnlg taaelalttl vvfvltqavk qtkvpnqwmp wlsmavgvvv gllsvfvtad
       61 hnflsgavmg llvggftsgl fdgfkgfnik eddk
//
LOCUS       WP_236008151             365 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Levilactobacillus andaensis].
ACCESSION   WP_236008151
VERSION     WP_236008151.1
KEYWORDS    RefSeq.
SOURCE      Levilactobacillus andaensis
  ORGANISM  Levilactobacillus andaensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
REFERENCE   1  (residues 1 to 365)
  AUTHORS   Mande,S.S., Sarfaty,S., Allen,M.D., Perham,R.N. and Hol,W.G.
  TITLE     Protein-protein interactions in the pyruvate dehydrogenase
            multienzyme complex: dihydrolipoamide dehydrogenase complexed with
            the binding domain of dihydrolipoamide acetyltransferase
  JOURNAL   Structure 4 (3), 277-286 (1996)
   PUBMED   8805537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07992.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Levilactobacillus andaensis"
                     /db_xref="taxon:2799570"
     Protein         1..365
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=39309
     Region          3..>358
                     /region_name="Lpd"
                     /note="Dihydrolipoamide dehydrogenase (E3) component of
                     pyruvate/2-oxoglutarate dehydrogenase complex or
                     glutathione oxidoreductase [Energy production and
                     conversion]; COG1249"
                     /db_xref="CDD:440861"
ORIGIN      
        1 mtetnydval igsghatwht avtlkqagks vvlierdmva gtcinygcda kslldgpsel
       61 ltqlknyhdq gvttativdw ksfmaykhrv idslpnqmta lfnqmgidii hgsavlmgnh
      121 ciqvngeiir atnivigtgq hskrlqisgr efmhdsrefl elpelpdhvt ligagiisle
      181 faalimqlga qatiidrgsr evkgfsfdqa tkliakmeaa gatfyfnetv lavdvttdgy
      241 tiatangvki atnyvldatg hepnvmhlgl enagihsnan gievdehlra ngdniyasgd
      301 vidkqlpklt ptttfeanyi arqilgdtap iaypvipsvl fslprlaqvg vtvdeatana
      361 ekdfv
//
LOCUS       WP_236008197             394 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Levilactobacillus andaensis].
ACCESSION   WP_236008197
VERSION     WP_236008197.1
KEYWORDS    RefSeq.
SOURCE      Levilactobacillus andaensis
  ORGANISM  Levilactobacillus andaensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Levilactobacillus andaensis"
                     /db_xref="taxon:2799570"
     Protein         1..394
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=42784
     Region          15..385
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(22..23,26..27,30,62,111..112,114..116,119,138,
                     141..142,145,217,220..221,224..226,229,256,260,311..312,
                     316,320,337,340..341,344..345,348)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mtdtqphrqw flfsmmmiaa nlrlpitfip pllthiektf alsssmagll tsiplitfai
       61 fspiivrlaq hwgneltvfl lffllivgsy lrvipsvpal fvgtfligig idsgnvlvpa
      121 likdhmannl rlgtslytls mlligalgta lagllishis lgatmsilsi psvlalltwl
      181 pnlklkrqtg rtaqkapvph yqsvwhqslg wlitlffglq slvyyalitw mpsilithgv
      241 stlsasnllt llqlsglpls fmvpylfskk hgvtillsvm tlgyvvaplt filpihslif
      301 ltilcvlagm gagvafnlav lfftekttnp iqtaaisgma qsagyllaav gpilfgylqq
      361 fmhswtlviw llalfavglt ltgfviqhrg miae
//
LOCUS       WP_236008225             664 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein
            [Actinomadura physcomitrii].
ACCESSION   WP_236008225
VERSION     WP_236008225.1
KEYWORDS    RefSeq.
SOURCE      Actinomadura physcomitrii
  ORGANISM  Actinomadura physcomitrii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Thermomonosporaceae; Actinomadura.
REFERENCE   1  (residues 1 to 664)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Actinomadura physcomitrii"
                     /db_xref="taxon:2650748"
     Protein         1..664
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /calculated_mol_wt=68620
     Region          50..175
                     /region_name="MecA_N"
                     /note="NTF2-like N-terminal transpeptidase domain;
                     pfam05223"
                     /db_xref="CDD:428377"
     Region          175..646
                     /region_name="FtsI"
                     /note="Cell division protein FtsI, peptidoglycan
                     transpeptidase (Penicillin-binding protein 2) [Cell cycle
                     control, cell division, chromosome partitioning, Cell
                     wall/membrane/envelope biogenesis]; COG0768"
                     /db_xref="CDD:440531"
ORIGIN      
        1 mtnrgrgrlp rlplrrlprg srtvrrravs laacgalvgt lttgcwaees ampavrdfli
       61 awqvgnypaa akktvgtdrk avasalgavr aqldaaslrl slgvsgdqgr vddakvkaia
      121 kngddadarf svkidlgeng qpweylghmh lrriggkwkv vwnpsiinpq lgpgqrlavv
      181 sdvpkraaie dgsghsmlhe vysydigvvp grladaqati dqlakvakfg ggrrldserl
      241 lgrvrsappq kflslltlry peqsalaqrl kqvpglkina ikapsapnsa pelvgelgpa
      301 tadllqqvga pyqpgdtigv sgiqllqqrr lagtpsisvv aqdpsgkttq vlkswpgaap
      361 qpvsttldpt vqhkadnalk gvpypaslva lrpntgqvva vsnrgtggen rafeahyqpg
      421 lafgivsaea lfaqggvkqn tktscpagvt vggrtftnka hadtsfantf algcrttlaq
      481 lsskidaral qaeaaqfgig rgwgvsvpaf tgslppltse gakaaamvge gvqvsplgma
      541 lvagaaragt wrspylltdp pkaadipaqt lpsdpvanlt tvlsrtaskg vaqaahvtgd
      601 vagtaataqy teggkqktvs wfvgssgela faiaiegpvs asqvaaaflr gipakarsgt
      661 gsag
//
LOCUS       WP_236008305             150 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2461 family protein [Actinomadura physcomitrii].
ACCESSION   WP_236008305
VERSION     WP_236008305.1
KEYWORDS    RefSeq.
SOURCE      Actinomadura physcomitrii
  ORGANISM  Actinomadura physcomitrii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Thermomonosporaceae; Actinomadura.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020922.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09365.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Actinomadura physcomitrii"
                     /db_xref="taxon:2650748"
     Protein         1..150
                     /product="DUF2461 family protein"
                     /calculated_mol_wt=16507
     Region          <57..137
                     /region_name="DUF2461"
                     /note="Conserved hypothetical protein (DUF2461); cl02374"
                     /db_xref="CDD:470556"
ORIGIN      
        1 mtcadlkaqg lgaqaaqhvi krvadayttl ranlragnls gensrrrrka raavgadssg
       61 kelqaivdgl raagleiagd rlktrprgtp edhprldllr hrslharegw pavpwmatre
      121 avtrvrdawr rlrplvewgd ehvgppdfsr
//
LOCUS       WP_236008524             264 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Actinomadura physcomitrii].
ACCESSION   WP_236008524
VERSION     WP_236008524.1
KEYWORDS    RefSeq.
SOURCE      Actinomadura physcomitrii
  ORGANISM  Actinomadura physcomitrii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Thermomonosporaceae; Actinomadura.
REFERENCE   1  (residues 1 to 264)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 264)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Actinomadura physcomitrii"
                     /db_xref="taxon:2650748"
     Protein         1..264
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=30092
     Region          58..240
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(113,115,117..118,170..171,189,236)
                     /site_type="active"
                     /db_xref="CDD:293813"
ORIGIN      
        1 meypicatcg vqygeprpdc picederqyv gwdgqrwtsl eelraaghrg lveeegldvv
       61 gigtepsiai gqralllrap sgnvlwdmvt hiddqlirev ddlggitaia ishphyygtm
      121 iewahafdap vyiheadrrw varpddavvf wegdthelad gltlinagvh fdggqvlhwr
      181 daralfsgdi lqvvndrdwv sfmysypnyi perprtvrra lrllepyefd rvygawwrki
      241 vytdgkdavr rsadrylsfa ldde
//
LOCUS       WP_236008718             125 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Actinomadura physcomitrii].
ACCESSION   WP_236008718
VERSION     WP_236008718.1
KEYWORDS    RefSeq.
SOURCE      Actinomadura physcomitrii
  ORGANISM  Actinomadura physcomitrii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Thermomonosporaceae; Actinomadura.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Actinomadura physcomitrii"
                     /db_xref="taxon:2650748"
     Protein         1..125
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=12773
     Region          <26..118
                     /region_name="PRK06523"
                     /note="short chain dehydrogenase; Provisional"
                     /db_xref="CDD:180604"
ORIGIN      
        1 mllithgpmn fdynaakaal nnlakglsee fgpqgirvnt vspgpvrtaw wteeggaadi
       61 iaqatgsdrd avldggaaem mslttgrmae pqevadaval lasprsastt gaevvdsgfl
      121 kesnp
//
LOCUS       WP_236008756             426 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Actinomadura physcomitrii].
ACCESSION   WP_236008756
VERSION     WP_236008756.1
KEYWORDS    RefSeq.
SOURCE      Actinomadura physcomitrii
  ORGANISM  Actinomadura physcomitrii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Thermomonosporaceae; Actinomadura.
REFERENCE   1  (residues 1 to 426)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 426)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02770.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Actinomadura physcomitrii"
                     /db_xref="taxon:2650748"
     Protein         1..426
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=45560
     Region          39..404
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(117,147,149,180,182,386..388,390,392)
                     /site_type="active"
                     /db_xref="CDD:173841"
ORIGIN      
        1 mceqsiprrr srcqcrless irnavgeagg aemsdlstyr enlrawlran apaptptidl
       61 naakafqacl fdagyagitw pkdvggqglg peyqqifsee ssdyelptsp fglgmgmcgp
      121 tlndlgtaqq rtrylpkllr geeiwcqlfs epgagsdvas lqtravrtdd gwvvdgqkvw
      181 ttnaqfadyg tllartdpdr pkhsgltmfv idmrapgvtv rplrdmtgha pfnevildsv
      241 rlpadavige vndgwkaavv mlghervaig srgnsktnpf dfdgvhamar dlnldgdpai
      301 ragladlytr ervldlfnir vgqetsagtp pgargsvgkl agtmlarlav evvseiagpa
      361 aagwepddtr adavalgins tpssgiaggt neiqrgiige rilglpkeps vdrgvpfrel
      421 kvgtqr
//
LOCUS       WP_236008843             241 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Actinomadura physcomitrii].
ACCESSION   WP_236008843
VERSION     WP_236008843.1
KEYWORDS    RefSeq.
SOURCE      Actinomadura physcomitrii
  ORGANISM  Actinomadura physcomitrii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Thermomonosporaceae; Actinomadura.
REFERENCE   1  (residues 1 to 241)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Actinomadura physcomitrii"
                     /db_xref="taxon:2650748"
     Protein         1..241
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=25470
     Region          11..228
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 memddelgag pirvvlvddq elvragftmv ldaqpdievv geagdgqqal dllrttaadv
       61 vlmdvrmprm dgieatrrvv sgewsgvgdg ggpkviiltt fdldeyafaa ikagaggfll
      121 kdagpaqlie aikavhsgda vvapsttkrl ldrfalhlpd teekasgale slteregevl
      181 rlvargmsna eiagrlfvse atvkthmgri lmklglrdrv qavvfayetg lvrsgqggdg
      241 r
//
LOCUS       WP_236008995             285 aa            linear   BCT 02-MAR-2025
DEFINITION  nitrilase-related carbon-nitrogen hydrolase [Actinomadura
            physcomitrii].
ACCESSION   WP_236008995
VERSION     WP_236008995.1
KEYWORDS    RefSeq.
SOURCE      Actinomadura physcomitrii
  ORGANISM  Actinomadura physcomitrii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Thermomonosporaceae; Actinomadura.
REFERENCE   1  (residues 1 to 285)
  AUTHORS   Pace,H.C. and Brenner,C.
  TITLE     The nitrilase superfamily: classification, structure and function
  JOURNAL   Genome Biol 2 (1), REVIEWS0001 (2001)
   PUBMED   11380987
REFERENCE   2  (residues 1 to 285)
  AUTHORS   Bork,P. and Koonin,E.V.
  TITLE     A new family of carbon-nitrogen hydrolases
  JOURNAL   Protein Sci 3 (8), 1344-1346 (1994)
   PUBMED   7987228
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012993.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00795.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Actinomadura physcomitrii"
                     /db_xref="taxon:2650748"
     Protein         1..285
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /GO_process="GO:0008152 - metabolic process [Evidence
                     IEA]"
                     /calculated_mol_wt=30077
     Region          7..271
                     /region_name="nitrilase"
                     /note="Nitrilase superfamily, including nitrile- or
                     amide-hydrolyzing enzymes and amide-condensing enzymes;
                     cl11424"
                     /db_xref="CDD:448250"
     Site            order(46,117,121,124,150..151,153..154,175)
                     /site_type="active"
                     /db_xref="CDD:143587"
     Site            order(46,117,150)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:143587"
     Site            order(118..121,123,130..132,151,153..157,160..161,
                     191..192,194..196,198..199,220..221,264..267)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143587"
ORIGIN      
        1 mapmttrvtc vqlapvlsdp dgnierarsa iraavgdgar ivvlpelats gylfesagea
       61 rdasitaddp rlaawsaeaa rggavvvagf cergadgllh nsalvldgag vravyrkvhl
      121 wdrektlfap graeppvldt pygrigvlic ydlefpempr alalrgadli avptnwpvvp
      181 rpdgehppev vaamaaaras rvliaccdrs gaergerwtr gtalidqdgw irastasegg
      241 ratadldlaa argkrltdla dviadrrpel ygelvrpdrg tgrag
//
LOCUS       WP_236008328              79 aa            linear   BCT 02-MAR-2025
DEFINITION  iron-sulfur cluster assembly protein [Heyndrickxia
            sporothermodurans].
ACCESSION   WP_236008328
VERSION     WP_236008328.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia sporothermodurans
  ORGANISM  Heyndrickxia sporothermodurans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
REFERENCE   1  (residues 1 to 79)
  AUTHORS   Mashruwala,A.A., Bhatt,S., Poudel,S., Boyd,E.S. and Boyd,J.M.
  TITLE     The DUF59 Containing Protein SufT Is Involved in the Maturation of
            Iron-Sulfur (FeS) Proteins during Conditions of High FeS Cofactor
            Demand in Staphylococcus aureus
  JOURNAL   PLoS Genet 12 (8), e1006233 (2016)
   PUBMED   27517714
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 79)
  AUTHORS   Schwenkert,S., Netz,D.J., Frazzon,J., Pierik,A.J., Bill,E.,
            Gross,J., Lill,R. and Meurer,J.
  TITLE     Chloroplast HCF101 is a scaffold protein for [4Fe-4S] cluster
            assembly
  JOURNAL   Biochem J 425 (1), 207-214 (2009)
   PUBMED   19817716
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 79)
  AUTHORS   Almeida,M.S., Herrmann,T., Peti,W., Wilson,I.A. and Wuthrich,K.
  TITLE     NMR structure of the conserved hypothetical protein TM0487 from
            Thermotoga maritima: implications for 216 homologous DUF59 proteins
  JOURNAL   Protein Sci 14 (11), 2880-2886 (2005)
   PUBMED   16199668
REFERENCE   4  (residues 1 to 79)
  AUTHORS   Ferrandez,A., Minambres,B., Garcia,B., Olivera,E.R., Luengo,J.M.,
            Garcia,J.L. and Diaz,E.
  TITLE     Catabolism of phenylacetic acid in Escherichia coli.
            Characterization of a new aerobic hybrid pathway
  JOURNAL   J Biol Chem 273 (40), 25974-25986 (1998)
   PUBMED   9748275
REFERENCE   5  (residues 1 to 79)
  AUTHORS   Olivera,E.R., Minambres,B., Garcia,B., Muniz,C., Moreno,M.A.,
            Ferrandez,A., Diaz,E., Garcia,J.L. and Luengo,J.M.
  TITLE     Molecular characterization of the phenylacetic acid catabolic
            pathway in Pseudomonas putida U: the phenylacetyl-CoA catabolon
  JOURNAL   Proc Natl Acad Sci U S A 95 (11), 6419-6424 (1998)
   PUBMED   9600981
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013999.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01883.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Heyndrickxia sporothermodurans"
                     /db_xref="taxon:46224"
     Protein         1..79
                     /product="iron-sulfur cluster assembly protein"
                     /calculated_mol_wt=8798
     Region          18..>70
                     /region_name="PA_CoA_Oxy4"
                     /note="phenylacetate-CoA oxygenase, PaaJ subunit;
                     TIGR02159"
                     /db_xref="CDD:131214"
ORIGIN      
        1 mtlknelliq vekclenvkd peipsvsvvd lgmieeikil esnkvhikal ptflgcpale
       61 iirknitdtv lqmnefhns
//
LOCUS       WP_236009052             307 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Actinomadura physcomitrii].
ACCESSION   WP_236009052
VERSION     WP_236009052.1
KEYWORDS    RefSeq.
SOURCE      Actinomadura physcomitrii
  ORGANISM  Actinomadura physcomitrii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Thermomonosporaceae; Actinomadura.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 307)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Actinomadura physcomitrii"
                     /db_xref="taxon:2650748"
     Protein         1..307
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=32819
     Region          29..127
                     /region_name="HxlR"
                     /note="DNA-binding transcriptional regulator, HxlR family
                     [Transcription]; COG1733"
                     /db_xref="CDD:441339"
     Region          148..299
                     /region_name="PhnO"
                     /note="N-acetyltransferase, GNAT superfamily (includes
                     histone acetyltransferase HPA2) [Transcription, General
                     function prediction only]; COG0454"
                     /db_xref="CDD:440222"
ORIGIN      
        1 mstdvpsarp vtsgavergv vvtaaeygac pvtgvlrcvg dkwspavirl ladrphgfne
       61 ldraiegisr rvltrtlral eaeglvsrtp apgraarvey altavgaslr eqlaalgrwa
      121 aehaaelpgm tyvpreehpm qkaddlgyev ratgwddpda aglrdamqae mesryadrva
      181 evlaaaadpd rkldgalgve aeqvvyvgva yaggtavghv alrrygdgve lkrmyvapah
      241 rgsgaatall aaaeraarsl gasrvvlqtg drqpdavrly eregytripv fppyewltfs
      301 icmekpl
//
LOCUS       WP_236009224             143 aa            linear   BCT 02-MAR-2025
DEFINITION  pyridoxal-dependent decarboxylase [Actinomadura physcomitrii].
ACCESSION   WP_236009224
VERSION     WP_236009224.1
KEYWORDS    RefSeq.
SOURCE      Actinomadura physcomitrii
  ORGANISM  Actinomadura physcomitrii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Thermomonosporaceae; Actinomadura.
REFERENCE   1  (residues 1 to 143)
  AUTHORS   Viguera,E., Trelles,O., Urdiales,J.L., Mates,J.M. and
            Sanchez-Jimenez,F.
  TITLE     Mammalian L-amino acid decarboxylases producing 1,4-diamines:
            analogies among differences
  JOURNAL   Trends Biochem Sci 19 (8), 318-319 (1994)
   PUBMED   7940675
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012503.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00282.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Actinomadura physcomitrii"
                     /db_xref="taxon:2650748"
     Protein         1..143
                     /product="pyridoxal-dependent decarboxylase"
                     /GO_function="GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA]"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0019752 - carboxylic acid metabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=15515
     Region          <13..>88
                     /region_name="GadA"
                     /note="Glutamate or tyrosine decarboxylase or a related
                     PLP-dependent protein [Amino acid transport and
                     metabolism]; COG0076"
                     /db_xref="CDD:439846"
ORIGIN      
        1 mrrqqrqsra adyddlraia alrerhdfwl hvdaafggfa alspdhadlv agldaadsic
       61 idlhkwlnvp ydsavqftrh rdlqvrvfpw pgtpppsgsp ispptwrtkp ssprppmpgc
      121 phseppsatg arpaptstas pkp
//
LOCUS       WP_236009238             293 aa            linear   BCT 02-MAR-2025
DEFINITION  L,D-transpeptidase family protein [Vibrio ulleungensis].
ACCESSION   WP_236009238
VERSION     WP_236009238.1
KEYWORDS    RefSeq.
SOURCE      Vibrio ulleungensis
  ORGANISM  Vibrio ulleungensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 293)
  AUTHORS   Biarrotte-Sorin,S., Hugonnet,J.E., Delfosse,V., Mainardi,J.L.,
            Gutmann,L., Arthur,M. and Mayer,C.
  TITLE     Crystal structure of a novel beta-lactam-insensitive peptidoglycan
            transpeptidase
  JOURNAL   J Mol Biol 359 (3), 533-538 (2006)
   PUBMED   16647082
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015679.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03734.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Vibrio ulleungensis"
                     /db_xref="taxon:2807619"
     Protein         1..293
                     /product="L,D-transpeptidase family protein"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=31961
     Region          18..290
                     /region_name="PRK10260"
                     /note="L,D-transpeptidase; Provisional"
                     /db_xref="CDD:182341"
ORIGIN      
        1 mlcrvfslil llpfvshaat falpedgsnv igknqvhive aketfaeiad khhvgflall
       61 aanpgvdpyl pgegvildlp tkmilpnapr kgivvnlael rlyyydpngk dvhvfpvgig
      121 aigretptmt tyvneiidgp swtptvsirk ryaaqgidlp vtvppgpenp lgnhalrlay
      181 gagqylihgt nkefgiglrv ssgcirmqpp hiewlfnqvk yktpvaivnd pvkvaysdds
      241 lfvevheplt nddgikmrpe ttmelemwle qnpkdsalvs gmlatqtgip qll
//
LOCUS       WP_236009246             408 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Vibrio ulleungensis].
ACCESSION   WP_236009246
VERSION     WP_236009246.1
KEYWORDS    RefSeq.
SOURCE      Vibrio ulleungensis
  ORGANISM  Vibrio ulleungensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 408)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Vibrio ulleungensis"
                     /db_xref="taxon:2807619"
     Protein         1..408
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=44595
     Region          22..388
                     /region_name="FrvX"
                     /note="Putative aminopeptidase FrvX [Amino acid transport
                     and metabolism, Carbohydrate transport and metabolism];
                     COG1363"
                     /db_xref="CDD:440974"
ORIGIN      
        1 mtstndmenk pvwqtempsd qfefmkkvla apspigfeaa mtygvikpef esfmpkewgi
       61 hqfkgnaglv fdshpgrddl vsvmivghad kirmqvrkid sdgkvwintd sflpttligh
      121 evqvfcqhpd daskykvinh ctvealgaih fstpaqrsge qgikpesiyl elhthgddrk
      181 aqvealgirv gdpilldrpi krgvspdtfy gayldnglgc fsvteiarml akegldnvrv
      241 lytvatheei grfgstllvg elkpdvliat dvnhdyeaap gigsrnmnpl kmgegftvgr
      301 gsvtseflvk sienvcreqn ipyqldfsgr dmgtdgmaaa lagvdsaais igypirnmht
      361 gsesahtgdl lssihaiaal lrhfnqqndg sgitqddlkn shirldql
//
LOCUS       WP_236009259             962 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-galactosidase [Vibrio ulleungensis].
ACCESSION   WP_236009259
VERSION     WP_236009259.1
KEYWORDS    RefSeq.
SOURCE      Vibrio ulleungensis
  ORGANISM  Vibrio ulleungensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 962)
  AUTHORS   Shimizu,T., Kobayashi,T., Ba-Thein,W., Ohtani,K. and Hayashi,H.
  TITLE     Sequence analysis of flanking regions of the pfoA gene of
            Clostridium perfringens: beta-galactosidase gene (pbg) is located
            in the 3'-flanking region
  JOURNAL   Microbiol Immunol 39 (9), 677-686 (1995)
   PUBMED   8577281
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014502.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02449.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..962
                     /organism="Vibrio ulleungensis"
                     /db_xref="taxon:2807619"
     Protein         1..962
                     /product="beta-galactosidase"
                     /EC_number="3.2.1.23"
                     /GO_component="GO:0009341 - beta-galactosidase complex
                     [Evidence IEA]"
                     /GO_function="GO:0004565 - beta-galactosidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=107020
     Region          55..218
                     /region_name="Agarase_CBM"
                     /note="Agarase CBM like domain; pfam17992"
                     /db_xref="CDD:436194"
     Region          261..428
                     /region_name="Agarase_CBM"
                     /note="Agarase CBM like domain; pfam17992"
                     /db_xref="CDD:436194"
     Region          <688..>849
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
ORIGIN      
        1 mndssktysr splslslcaa lgvavftmta cstssttsns ptsnteqsdt svapdfestp
       61 ffsaasatha tvkpvsgdgv tegeralais fdavseadky nywpnvkifp qgepwnwndk
      121 gsftvdvtnp tdkpaniifk lvdnvgqmga atnqlnyavt ipagetqqve mlfnggtrql
      181 dgywdgqkln lrrlvelqvf vqgpmdaqqv vldnfslvds tgdfvsaqek vieagpiptl
      241 kmvtdfdtmp slisdrstst tvkrikrddg kaievvftad naypnltfks sspfdwseig
      301 dfnlafdien pssdalqmfv rvdqaenknw ggtadgvnds lssymtllpn qrstyylsla
      361 evagdmtsgm rseppkksys aqaishgwgl tsldvsnivs fqlylqnpts nakiimdsvr
      421 lvpnldadts rytnivdqyg qfsgdtwaek vtsdeqliaa gqeelaklgq vkpmsdrsly
      481 ggwkagpkle atgyfrtekv dgkwslvdpq gylffmtgld nvrmddtvtm tgvdfdnpaa
      541 regrivasel rnsmfewlpe dddpyavnyd yapyvhsgat kkgevfsfyr tnlmrkyqtd
      601 rdsaletwke vtldrmqewg fttlgnwidp mffgservay eahgwingnh qristgndyw
      661 gpihdpfdpe fvnstremae gvaaqvdknd pwlvgifvdn eiswgnvmne anhyglivna
      721 lsldakqspa kaafsahlkq kyttidalnr awktqisswe tfdasfehrs alkagmksdy
      781 sdmltlladk yfstvdaeln rvlpnhmymg arfadwgvtp eiargaakyv dvmsynlyan
      841 dlndpkkahf kqwlaeldkp svigefhfgs tdtglfhggi vtvanqtqra emythymqsv
      901 vdnpyfvgah wfqyldspat grawdgenyn igfvtiadep yvelieaate fnrtlydnrf
      961 gk
//
LOCUS       WP_236009307             518 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Vibrio
            ulleungensis].
ACCESSION   WP_236009307
VERSION     WP_236009307.1
KEYWORDS    RefSeq.
SOURCE      Vibrio ulleungensis
  ORGANISM  Vibrio ulleungensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 518)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 518)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 518)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 518)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Vibrio ulleungensis"
                     /db_xref="taxon:2807619"
     Protein         1..518
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=57603
     Region          19..507
                     /region_name="Uup"
                     /note="ATPase components of ABC transporters with
                     duplicated ATPase domains [General function prediction
                     only]; COG0488"
                     /db_xref="CDD:440254"
ORIGIN      
        1 mgawlfrhle cnlssgvwgl vgrngcgksk lihllsgeed pseghitrvg elgcfsqlps
       61 kllsseltvt qylgldekiv alraiengsv derdfatlee dwevevklln llkklrlpek
      121 ldtpcsllsg gqlallqlhk lfesdasill ldeptnhlds vgrawladkl qhfegcaviv
      181 shdrylleqc qgiyhlssng ldyfdggysl yhatrsaqle tlerkverlg keakaiekqa
      241 qlnlekaqrr eaqgvklrks gsqpkilldg kaqkaqlars aqqlnqnnql drvnkdldva
      301 kkqqeqlksq klylntnhss krstlvsvee cvldfvdvpi anfkvaqger whidgdngtg
      361 kslllkalhg nhnhfkgsit lrhptvyldq hfgllpesst lldalmdfcv gltnseawll
      421 lasigfrrda vhkrvsvlsg gekmklamlm vshrmdapll lldepdnhld idskqilasa
      481 lnqyqgafmv vshdkvfide lgiantinmq ksselclt
//
LOCUS       WP_236009378             392 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Vibrio ulleungensis].
ACCESSION   WP_236009378
VERSION     WP_236009378.1
KEYWORDS    RefSeq.
SOURCE      Vibrio ulleungensis
  ORGANISM  Vibrio ulleungensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Vibrio ulleungensis"
                     /db_xref="taxon:2807619"
     Protein         1..392
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=43355
     Region          22..382
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 miaetlthrq sldmssghrt kkvvhvvqhl rpggleclvl dflryapahw dvriislege
       61 akqavndwpa lqpfknqitf lnksgrgvsv ksikqlvnyl nsqdidvvhs hhigpllyag
      121 isakltslvs tqitsvhteh dawhlnaskn ralqtillrl tkpilvadaq avqstlatlf
      181 pftqphtiyn gidtrsfslg drlnartalg lcgfnkndil igsagrlepv kghdllikam
      241 hfmptnyklv iagsgsqket lqnlinhlnl qervtllgrv dampqfyqsl dgfclpsrre
      301 gfplsaleaq scgiptvvte vgasvqtlcp tsgsscapfr pialakillr lkpldkpsai
      361 qtrqyiqhnf dvrsmvkqyq qlikkgvhne yf
//
LOCUS       WP_236009469             418 aa            linear   BCT 02-MAR-2025
DEFINITION  carbohydrate porin [Vibrio ulleungensis].
ACCESSION   WP_236009469
VERSION     WP_236009469.1
KEYWORDS    RefSeq.
SOURCE      Vibrio ulleungensis
  ORGANISM  Vibrio ulleungensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 418)
  AUTHORS   Wylie,J.L. and Worobec,E.A.
  TITLE     The OprB porin plays a central role in carbohydrate uptake in
            Pseudomonas aeruginosa
  JOURNAL   J Bacteriol 177 (11), 3021-3026 (1995)
   PUBMED   7768797
REFERENCE   2  (residues 1 to 418)
  AUTHORS   Wylie,J.L., Bernegger-Egli,C., O'Neil,J.D. and Worobec,E.A.
  TITLE     Biophysical characterization of OprB, a glucose-inducible porin of
            Pseudomonas aeruginosa
  JOURNAL   J Bioenerg Biomembr 25 (5), 547-556 (1993)
   PUBMED   8132494
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016830.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04966.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Vibrio ulleungensis"
                     /db_xref="taxon:2807619"
     Protein         1..418
                     /product="carbohydrate porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /GO_process="GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /calculated_mol_wt=45678
     Region          <143..418
                     /region_name="OprB"
                     /note="Carbohydrate-selective porin, OprB family; cl17816"
                     /db_xref="CDD:473095"
ORIGIN      
        1 mnfrlsitss lilslltvsg atlasdndns feeqpvmrde piesshfdaw nttkeqwqke
       61 yglqlgmdyn mlgmaatdal gdsaaasgal rvygqwdmvh tdsgstggvv fkfehrhkyt
      121 dtspkdfglt elgylgfahs lygdqgfrtt hlfwrqsmle ermvayagfl dmtdytdfya
      181 laspwndfnn avfttgsgti gglpdgalgv mlggfftdhv ygsasildak gnasdltqgv
      241 kdlfdtgatw ksleigytps sdmlfidnah vsfwqrdavg sdkeghgvsv svsglvknqw
      301 lpfiragwae dggamydasv sagfgfiptn rsedmlglaf nwaspmastf ggidfddqyt
      361 aelyyrsklt pwfqlspsiq vmnhtainfd sidagdtana likdktdivf glkaqflf
//
LOCUS       WP_236009571             403 aa            linear   BCT 02-MAR-2025
DEFINITION  carbohydrate porin [Vibrio ulleungensis].
ACCESSION   WP_236009571
VERSION     WP_236009571.1
KEYWORDS    RefSeq.
SOURCE      Vibrio ulleungensis
  ORGANISM  Vibrio ulleungensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 403)
  AUTHORS   Wylie,J.L. and Worobec,E.A.
  TITLE     The OprB porin plays a central role in carbohydrate uptake in
            Pseudomonas aeruginosa
  JOURNAL   J Bacteriol 177 (11), 3021-3026 (1995)
   PUBMED   7768797
REFERENCE   2  (residues 1 to 403)
  AUTHORS   Wylie,J.L., Bernegger-Egli,C., O'Neil,J.D. and Worobec,E.A.
  TITLE     Biophysical characterization of OprB, a glucose-inducible porin of
            Pseudomonas aeruginosa
  JOURNAL   J Bioenerg Biomembr 25 (5), 547-556 (1993)
   PUBMED   8132494
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016830.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04966.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Vibrio ulleungensis"
                     /db_xref="taxon:2807619"
     Protein         1..403
                     /product="carbohydrate porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /GO_process="GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /calculated_mol_wt=43840
     Region          2..401
                     /region_name="OprB"
                     /note="Carbohydrate-selective porin, OprB family; cl17816"
                     /db_xref="CDD:473095"
ORIGIN      
        1 mviscsalss faiaanfesp dsvestiaqq kaqqlswren lanngftfga dyfalgltsg
       61 dgsdgqsvda ssgvarlyga wsltpsgrlv wkvehrhayg sstpknyafi dnfsgneglg
      121 yagliapafs dqgfrvtdln wkqtindgrg tlivgwqdvt nyvdvyalas pwsgftnlsf
      181 stgsgamglp ddgilalsag hmisdqyyvv agiadangks ddifdgfstv fgsdaayftt
      241 lelgwtasqe qiytdnvhvt fwhfgegtrh nlnyptpgyt dggkginfsw sqfftpqimp
      301 fvrggysqgq valydkslsa glgyfglgsa nnnlgfafnw seineeilqp iahseqqwtt
      361 elyynmqfgd yvqitpdiqy ikdpsfsnes sawvfgvrar lfi
//
LOCUS       WP_236009642             368 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Actinomadura physcomitrii].
ACCESSION   WP_236009642
VERSION     WP_236009642.1
KEYWORDS    RefSeq.
SOURCE      Actinomadura physcomitrii
  ORGANISM  Actinomadura physcomitrii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Thermomonosporaceae; Actinomadura.
REFERENCE   1  (residues 1 to 368)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 368)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 368)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 368)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Actinomadura physcomitrii"
                     /db_xref="taxon:2650748"
     Protein         1..368
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=39827
     Region          1..>49
                     /region_name="Lpp"
                     /note="Outer membrane murein-binding lipoprotein Lpp [Cell
                     wall/membrane/envelope biogenesis]; COG4238"
                     /db_xref="CDD:443380"
     Region          68..312
                     /region_name="AfuA"
                     /note="ABC-type Fe3+ transport system, periplasmic
                     component [Inorganic ion transport and metabolism];
                     COG1840"
                     /db_xref="CDD:441445"
ORIGIN      
        1 mrrkwlvatv vagsltlagc gssgdaknlp qdvtaaggmd qlvkkaqseg elslyagtte
       61 eattawgkaf tkkygikvkl yrdgsttlfq kwaqeaqggv nkadiviqnv fqlwedaadk
      121 dwitnyktqn fggydydtvf pgddlvgkvy plhqsigava wntkvvtpqq qallekdpva
      181 altdpsfkgk ialgdtggat tagnyanaii nqagkygwkw legvgandpa lfesqipiaa
      241 qlvkgeyavt fgtdtlyndy vdegapiqyk ypdpaasalw sialptktph pyaarlfmew
      301 atsaeghdlm aklgtgtgtr tgwkddrkva kepwyappkp wygmselpql egkkfgefvt
      361 kvnetlkg
//
LOCUS       WP_236009832             478 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme [Actinomadura
            physcomitrii].
ACCESSION   WP_236009832
VERSION     WP_236009832.1
KEYWORDS    RefSeq.
SOURCE      Actinomadura physcomitrii
  ORGANISM  Actinomadura physcomitrii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Thermomonosporaceae; Actinomadura.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Actinomadura physcomitrii"
                     /db_xref="taxon:2650748"
     Protein         1..478
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /calculated_mol_wt=51990
     Region          27..>462
                     /region_name="PLN02724"
                     /note="Molybdenum cofactor sulfurase"
                     /db_xref="CDD:215384"
ORIGIN      
        1 mmsastdswa agatpgtdae yastgrldel raaeyrhldg qayldytgag vaadaqirah
       61 arrlaghcyg nphsenptss astelvertr aailrffnas pdeyavvfta natgacrlvg
      121 eaypfgrgsr lvltgdnhns vngirefara rgaqvvgvpv rgadlrvped dlrgalgrrr
      181 gllvypaqsn ftgvqhplew ialahargyd vlldaaafvp anrldlgrtr pdfvpvswyk
      241 vfgyptgvga lvarraalar lrrpwfaggt iqavsalggw hvlardetaf edgtlnflsi
      301 pdvefgirwi edigidlihr rvarltswll hrlaglrhae gspmvrvygp agtdrrggtv
      361 afnvldsrgr ivderiiard taaagisvrt gcfcnpgage gafriseral rdrrtlrrgm
      421 rnldeyldll hlpsggavra slglvsnvad verlvrflqe tygdrepdar glrprerc
//
LOCUS       WP_236010028              99 aa            linear   BCT 02-MAR-2025
DEFINITION  alcohol dehydrogenase catalytic domain-containing protein
            [Actinomadura physcomitrii].
ACCESSION   WP_236010028
VERSION     WP_236010028.1
KEYWORDS    RefSeq.
SOURCE      Actinomadura physcomitrii
  ORGANISM  Actinomadura physcomitrii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Thermomonosporaceae; Actinomadura.
REFERENCE   1  (residues 1 to 99)
  AUTHORS   Taneja,B. and Mande,S.C.
  TITLE     Conserved structural features and sequence patterns in the GroES
            fold family
  JOURNAL   Protein Eng 12 (10), 815-818 (1999)
   PUBMED   10556240
REFERENCE   2  (residues 1 to 99)
  AUTHORS   Murzin,A.G.
  TITLE     Structural classification of proteins: new superfamilies
  JOURNAL   Curr Opin Struct Biol 6 (3), 386-394 (1996)
   PUBMED   8804825
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08240.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Actinomadura physcomitrii"
                     /db_xref="taxon:2650748"
     Protein         1..99
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /calculated_mol_wt=9743
     Region          1..>91
                     /region_name="Qor"
                     /note="NADPH:quinone reductase or related Zn-dependent
                     oxidoreductase [Energy production and conversion, General
                     function prediction only]; COG0604"
                     /db_xref="CDD:440369"
ORIGIN      
        1 mraiivdkpg gpdaleitea repdpgpgqv rirtaaagvn pvdaatragl ladaglmppf
       61 gsrgpigigw dvagtveatg pdvrrfapgd aaspsttcg
//
LOCUS       WP_236009579             448 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase RNA specificity domain-containing
            protein [Vibrio ulleungensis].
ACCESSION   WP_236009579
VERSION     WP_236009579.1
KEYWORDS    RefSeq.
SOURCE      Vibrio ulleungensis
  ORGANISM  Vibrio ulleungensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 448)
  AUTHORS   Roux,C.M., DeMuth,J.P. and Dunman,P.M.
  TITLE     Characterization of components of the Staphylococcus aureus mRNA
            degradosome holoenzyme-like complex
  JOURNAL   J Bacteriol 193 (19), 5520-5526 (2011)
   PUBMED   21764917
REFERENCE   2  (residues 1 to 448)
  AUTHORS   Nishida,Y., Ishikawa,H., Baba,S., Nakagawa,N., Kuramitsu,S. and
            Masui,R.
  TITLE     Crystal structure of an archaeal cleavage and polyadenylation
            specificity factor subunit from Pyrococcus horikoshii
  JOURNAL   Proteins 78 (10), 2395-2398 (2010)
   PUBMED   20544974
REFERENCE   3  (residues 1 to 448)
  AUTHORS   Mandel,C.R., Kaneko,S., Zhang,H., Gebauer,D., Vethantham,V.,
            Manley,J.L. and Tong,L.
  TITLE     Polyadenylation factor CPSF-73 is the pre-mRNA 3'-end-processing
            endonuclease
  JOURNAL   Nature 444 (7121), 953-956 (2006)
   PUBMED   17128255
REFERENCE   4  (residues 1 to 448)
  AUTHORS   Callebaut,I., Moshous,D., Mornon,J.P. and de Villartay,J.P.
  TITLE     Metallo-beta-lactamase fold within nucleic acids processing
            enzymes: the beta-CASP family
  JOURNAL   Nucleic Acids Res 30 (16), 3592-3601 (2002)
   PUBMED   12177301
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019159.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07521.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Vibrio ulleungensis"
                     /db_xref="taxon:2807619"
     Protein         1..448
                     /product="MBL fold metallo-hydrolase RNA specificity
                     domain-containing protein"
                     /calculated_mol_wt=48964
     Region          16..439
                     /region_name="COG1782"
                     /note="Predicted metal-dependent RNase, contains
                     metallo-beta-lactamase and KH domains [General function
                     prediction only]"
                     /db_xref="CDD:441388"
ORIGIN      
        1 mksshqltpe invihhgakh gvtgschqln lpggsllvdc grfqghetga ldidfdvtki
       61 nalivthahi dhvgripwll aagyrgpiyl thasqhllpl mlddaldieg laakarekil
      121 atltmqmqpc dykrwvpiec gkgvtvrfqp aghilgsayv eindndntri vfsgdlgpnq
      181 tpllpdpqsp nradflfles tygnrkhqsi vdrkarlani lhdaiknqgt viipafsvgr
      241 tqellydieq lihshelsss lpiivdspma mkvtdsyrlf krlwgneakh rvksgrhpla
      301 feqcitidsh eqhlaivnql asteqsaivv aasgmctggr vvnylkallp lastevlfcg
      361 yqakgtlgse lveapnnvqi ddqsvpvkas iytmsgysah adqadlvsfv rsikssiqqv
      421 hlihgetkak rglksqlqal anvqqvie
//
LOCUS       WP_236010196             143 aa            linear   BCT 02-MAR-2025
DEFINITION  phage integrase Arm DNA-binding domain-containing protein
            [Pseudomonas paraversuta].
ACCESSION   WP_236010196
VERSION     WP_236010196.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas paraversuta
  ORGANISM  Pseudomonas paraversuta
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 143)
  AUTHORS   Wojciak,J.M., Sarkar,D., Landy,A. and Clubb,R.T.
  TITLE     Arm-site binding by lambda -integrase: solution structure and
            functional characterization of its amino-terminal domain
  JOURNAL   Proc Natl Acad Sci U S A 99 (6), 3434-3439 (2002)
   PUBMED   11904406
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020572.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09003.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Pseudomonas paraversuta"
                     /db_xref="taxon:2750624"
     Protein         1..143
                     /product="phage integrase Arm DNA-binding
                     domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0008907 - integrase activity [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=16263
     Region          2..56
                     /region_name="Arm-DNA-bind_1"
                     /note="Bacteriophage lambda integrase, Arm DNA-binding
                     domain; pfam09003"
                     /db_xref="CDD:430365"
ORIGIN      
        1 masrprtikn rklppnlypn gkywryrnpi tglmtsinrp ledaiklara anaklapvma
       61 gdgellmilt gdrlptmrnl verfeaewlk drgyaartlv eiqfkleryr qdlgdqlvgq
      121 ldvlsiaeyl dgfsnnaytk hrg
//
LOCUS       WP_236010222              66 aa            linear   BCT 02-MAR-2025
DEFINITION  ribbon-helix-helix protein, CopG family [Pseudomonas paraversuta].
ACCESSION   WP_236010222
VERSION     WP_236010222.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas paraversuta
  ORGANISM  Pseudomonas paraversuta
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 66)
  AUTHORS   Gomis-Ruth,F.X., Sola,M., Acebo,P., Parraga,A., Guasch,A.,
            Eritja,R., Gonzalez,A., Espinosa,M., del Solar,G. and Coll,M.
  TITLE     The structure of plasmid-encoded transcriptional repressor CopG
            unliganded and bound to its operator
  JOURNAL   EMBO J 17 (24), 7404-7415 (1998)
   PUBMED   9857196
REFERENCE   2  (residues 1 to 66)
  AUTHORS   Acebo,P., Garcia de Lacoba,M., Rivas,G., Andreu,J.M., Espinosa,M.
            and del Solar,G.
  TITLE     Structural features of the plasmid pMV158-encoded transcriptional
            repressor CopG, a protein sharing similarities with both
            helix-turn-helix and beta-sheet DNA binding proteins
  JOURNAL   Proteins 32 (2), 248-261 (1998)
   PUBMED   9714164
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013561.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01402.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Pseudomonas paraversuta"
                     /db_xref="taxon:2750624"
     Protein         1..66
                     /product="ribbon-helix-helix protein, CopG family"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=7229
     Region          1..55
                     /region_name="RHH_9"
                     /note="Ribbon-helix-helix protein; pfam19839"
                     /db_xref="CDD:437671"
ORIGIN      
        1 mnkkstrlti lidtptkekl ealsemadlt vsqilrklik nhlntlevpn nlppgepsnv
       61 sshiin
//
LOCUS       WP_236010232             123 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Pseudomonas paraversuta].
ACCESSION   WP_236010232
VERSION     WP_236010232.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas paraversuta
  ORGANISM  Pseudomonas paraversuta
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 123)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Pseudomonas paraversuta"
                     /db_xref="taxon:2750624"
     Protein         <1..123
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <18..107
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 ypllsidwlp kfasppswrd wfkaqqvdce sirdgyrvys lsamaiqaal agqgvvlaqy
       61 smvadalsdg rlirpfaral plpsayflvg akgafdkahc rdfhrwivar greqmvinqr
      121 lra
//
LOCUS       WP_236010227             168 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Pseudomonas paraversuta].
ACCESSION   WP_236010227
VERSION     WP_236010227.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas paraversuta
  ORGANISM  Pseudomonas paraversuta
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 168)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 168)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025054.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13673.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Pseudomonas paraversuta"
                     /db_xref="taxon:2750624"
     Protein         1..168
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=19230
     Region          15..165
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
     Site            order(95..97,107..108)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
ORIGIN      
        1 mtdssflrtl cektmeirrf rigdeialfd vfysaiheva srdytrdqve awapadldqt
       61 lwaehlrnlr pfvaevggei vgyadiqpng yidhffvsgt hprqgigtll mnriheearl
      121 lgideltsdv sktaerffel ygfhvvrrgf pirrgvtlqn almqknlk
//
LOCUS       WP_236010234             157 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase, partial [Pseudomonas paraversuta].
ACCESSION   WP_236010234
VERSION     WP_236010234.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas paraversuta
  ORGANISM  Pseudomonas paraversuta
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024991.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13604.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Pseudomonas paraversuta"
                     /db_xref="taxon:2750624"
     Protein         1..>157
                     /product="AAA family ATPase"
     Region          14..>157
                     /region_name="AAA_30"
                     /note="AAA domain; pfam13604"
                     /db_xref="CDD:433343"
     Site            order(40..46,118)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350691"
ORIGIN      
        1 msqeqvakal egstltagqr qavetivste nrfvgiqgda gtgktysver avqlltsvne
       61 amsygktedq lgyrilalap ygnqvaalkn egmdahtlas ffntkdktld ertiivldea
      121 gvvgarqmeq lmrlveksga rlvqlgdtkq teaieag
//
LOCUS       WP_236010263              43 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6124 family protein, partial [Pseudomonas alvandae].
ACCESSION   WP_236010263
VERSION     WP_236010263.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas alvandae
  ORGANISM  Pseudomonas alvandae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039664.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19619.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..43
                     /organism="Pseudomonas alvandae"
                     /db_xref="taxon:2842348"
     Protein         <1..43
                     /product="DUF6124 family protein"
     Region          <2..34
                     /region_name="DUF6124"
                     /note="Family of unknown function (DUF6124); pfam19619"
                     /db_xref="CDD:437451"
ORIGIN      
        1 ndlafdlegs rrhvalglqq lielgtllan ralddieppq ppr
//
LOCUS       WP_236010507             381 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Candidatus Laterigemmans baculatus].
ACCESSION   WP_236010507
VERSION     WP_236010507.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Laterigemmans baculatus
  ORGANISM  Candidatus Laterigemmans baculatus
            Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia;
            Pirellulales; Pirellulaceae; Candidatus Laterigemmans.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Candidatus Laterigemmans baculatus"
                     /db_xref="taxon:2770505"
     Protein         1..381
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=42199
     Region          4..363
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mtirvaliip tmdrggaerq vcmlaaalpr erfdvhvvll tregpriael dqagvphtlv
       61 gkrgkadpta yfrlrrllre lrpdvvhtfl faansygraa aksvgvpvii gsercvdpwk
      121 twrhgvidrr lakistaitt nssgvrdfya argvpaelfr iipngiepap psqtsrleia
      181 rrleldpqrh wigavgrlwp qkryrdliwa tdmlntlrpd dvslvivgdg pqrdellrhr
      241 davsnvdrvr fvgpredvae llphldvfwl gsgyegqsna lmeamragrp cvatdipgnr
      301 dliehdqhgl lvavgdspdf arqtqhlleh pddaarlgra aaeriarefs vsamvdahal
      361 lyesltglsg senfseksvk a
//
LOCUS       WP_236010647             455 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase [Flavobacterium chungangense].
ACCESSION   WP_236010647
VERSION     WP_236010647.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium chungangense
  ORGANISM  Flavobacterium chungangense
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 455)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Flavobacterium chungangense"
                     /db_xref="taxon:554283"
     Protein         1..455
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=51915
     Region          31..444
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
     Site            order(39,77,216,275..276)
                     /site_type="active"
                     /db_xref="CDD:293765"
     Site            order(39,77,216,276)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293765"
ORIGIN      
        1 mntknqllvl lsfcfsisys qenqmsssek pniiliiadd agwndvgyhg sviktpnidf
       61 ldkngveldr fyvnptcsps raslftgrpa srmgivapis dksqfklpds iptlpkllhk
      121 nnyqtaligk whlglqpgsg pkaygfdysy gflhgqldqy thlykngdks wyrngefiee
      181 eghvtdlltn eavkwiseir dpkksfflev aysaphfplq eeqkwkdpym nsikdssrrd
      241 yaaamshldn svgilleklk qqkldkntlv ifmsdngamq dwdskneyng ihpsntvlgd
      301 ntplrdwkts nyegairvpc ifywkdhlkk yknenyisvi dllpgilsla gdndlpksie
      361 gknvwpsise nkaisdqeiy vrghlqesli rkpwkiirtr hantpadlel yniekdpgek
      421 knlileeksv aekmeialen qfkkdakkvn ydkik
//
LOCUS       WP_236010659             320 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Flavobacterium chungangense].
ACCESSION   WP_236010659
VERSION     WP_236010659.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium chungangense
  ORGANISM  Flavobacterium chungangense
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 320)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Flavobacterium chungangense"
                     /db_xref="taxon:554283"
     Protein         1..320
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=36125
     Region          40..320
                     /region_name="MET2"
                     /note="Homoserine O-acetyltransferase [Amino acid
                     transport and metabolism]; COG2021"
                     /db_xref="CDD:441624"
ORIGIN      
        1 mesipnpiil qnfttesgal ynslplsfal fglplhsapv vlvnhaltgn aqvtgengww
       61 ndligegkti dttkysvlaf nvpgngsdsf sienyqdfta rdvariflkg ietlqieely
      121 aiiggsvggg iawemmalap nitqhlipia tdwkstdwmi ancflqeqil nnsskpieda
      181 rihamlcyrs pesfkekfqr tinqdllifn ieswlahhgd klqkryqlts yklmnqllkt
      241 iditrngedf ktlmlktkad ihiiaidsdl fftpkenqet fqelkkfkdn vfyseinsvh
      301 ghdaflieyk qldnllaaif
//
LOCUS       WP_236010700             111 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: RteC domain-containing protein [Flavobacterium].
ACCESSION   WP_236010700
VERSION     WP_236010700.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium
  ORGANISM  Flavobacterium
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae.
REFERENCE   1  (residues 1 to 111)
  AUTHORS   Stevens,A.M., Shoemaker,N.B., Li,L.Y. and Salyers,A.A.
  TITLE     Tetracycline regulation of genes on Bacteroides conjugative
            transposons
  JOURNAL   J Bacteriol 175 (19), 6134-6141 (1993)
   PUBMED   8407786
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020914.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09357.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Flavobacterium"
                     /db_xref="taxon:237"
     Protein         1..111
                     /product="RteC domain-containing protein"
                     /calculated_mol_wt=13199
     Region          64..>102
                     /region_name="RteC"
                     /note="RteC protein; pfam09357"
                     /db_xref="CDD:430555"
ORIGIN      
        1 marmekfyve tlrkleteih eleieadcsi qrieiivnli vnslyklkmf vlekgfkntd
       61 eeihffkykk pvivskliyy ntiykietkk tydvkliiky lnicisviks p
//
LOCUS       WP_236010740             864 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Flavobacterium
            chungangense].
ACCESSION   WP_236010740
VERSION     WP_236010740.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium chungangense
  ORGANISM  Flavobacterium chungangense
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 864)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Flavobacterium chungangense"
                     /db_xref="taxon:554283"
     Protein         1..864
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=92810
     Region          19..>164
                     /region_name="OMP_RagA_SusC"
                     /note="TonB-linked outer membrane protein, SusC/RagA
                     family; TIGR04056"
                     /db_xref="CDD:274948"
     Region          119..864
                     /region_name="Fiu"
                     /note="Outer membrane receptor for monomeric catechols
                     [Inorganic ion transport and metabolism]; COG4774"
                     /db_xref="CDD:443806"
ORIGIN      
        1 mgiiialllf nisfsqnstl sgtvtdatga gipgvniaik nsdkatvtdf dgkyaftnlr
       61 netvtiiaty igykttemni qingntiqni slvedanvld dvvvtgvvnp ktkikssvsi
      121 ttlgteqitq saprstaeif rtipgirses sggegnsnis vrgvpissgg skylqlqedg
      181 lpvllfgdia fatadiftrf dgniakieai rggsastlss nspggiinfi sktgkteggn
      241 istsfgldyg nfrtdldygs kigdglyfhi ggfyrtgegv rktgfnsnng gqikfnitke
      301 fengsitlya kflndraaay mpmpvavsgt nanpnwksvd gydattgalq siylthsvgl
      361 gpdgnvrrea vsngmhpvsk siganvsfnl ennwkitdni rfssnsggfi spfpaelasa
      421 stiansfgag stlsyadngv afntpnglva rihmfdtqln nmgnfmndlr ltkkfdkigi
      481 taglfksmqn vsmswlwnsy lqevsddnpr linvndaggn slsenglyay gtpawgnlar
      541 nydtqynvsa pyvnisvdat enlsfegglr ydkgkvtgsf aggasttydi nndgeisape
      601 qnvfaidnan ptavnydydy ysytlganll lasrqsvfar isrgasakad rilfsgldyl
      661 dgnkinaldf ltqaeigfkq kfdngylyat afhsktdeqg gfeatsnsii knnyksmgle
      721 letaynvtdn ldlrgsltyt kaeitsgdnn gnqprrqpkl mysflptykf mdnkntlgls
      781 figqtkayaq dsnqlvmngf vivngfvevg iakglsvnvs gnnllntlai teaeegsite
      841 ntvnyvrars mtgrsismal sykf
//
LOCUS       WP_236010758             555 aa            linear   BCT 02-MAR-2025
DEFINITION  OstA-like protein [Flavobacterium chungangense].
ACCESSION   WP_236010758
VERSION     WP_236010758.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium chungangense
  ORGANISM  Flavobacterium chungangense
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 555)
  AUTHORS   Aono,R., Negishi,T. and Nakajima,H.
  TITLE     Cloning of organic solvent tolerance gene ostA that determines
            n-hexane tolerance level in Escherichia coli
  JOURNAL   Appl Environ Microbiol 60 (12), 4624-4626 (1994)
   PUBMED   7811102
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024500.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13100.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Flavobacterium chungangense"
                     /db_xref="taxon:554283"
     Protein         1..555
                     /product="OstA-like protein"
                     /calculated_mol_wt=62891
     Region          27..182
                     /region_name="LptD_N"
                     /note="LptA/(LptD N-terminal domain) LPS transport
                     protein; cl21541"
                     /db_xref="CDD:451300"
     Region          215..>325
                     /region_name="LptD"
                     /note="LPS assembly outer membrane protein LptD (organic
                     solvent tolerance protein OstA) [Cell
                     wall/membrane/envelope biogenesis]; COG1452"
                     /db_xref="CDD:441061"
     Region          237..>366
                     /region_name="LptA"
                     /note="Lipopolysaccharide export system protein LptA [Cell
                     wall/membrane/envelope biogenesis]; COG1934"
                     /db_xref="CDD:441537"
ORIGIN      
        1 mkkllffisf clllgsiesl faqapkkivv ensdfsdvne veipgalllt gnvkinhdgv
       61 vltcnkayff qkenyikafg nvqlvqgdtl flnskyaeys gnvkkafatg navmtspdat
      121 lqtdtinfdr nvqevfyntk gtivnkdntl vsksgryyva qkkfqfltev tltnpkyvmk
      181 snhldyysns ghsylfgpst itsktnyiyt engfydtkkn lahflrksyi kyddrriegd
      241 slfynrntef asatrnvkit dsinkgivkg hyaelyklkd smyvtkrava inlvekdsvy
      301 ihgkklmvtg kegeriiraf knvrfykidm sgkcdslhsn sktaltklig npilwseenq
      361 itgdimhlig nnttrkidsl kvlnntfiis kdtlgtgynq vkglnlfgkf kdgklhyvdv
      421 iknteaiyya rndanelvgi nknvsskinl iiennaieni tffnnvngnl ypeaelpend
      481 rklrgfvwrg derikskddi fppeenelnd klikegkaee akpnipmkvr ketlnydkkk
      541 paakngtmpg vktkk
//
LOCUS       WP_236010769             695 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-L-fucosidase [Flavobacterium chungangense].
ACCESSION   WP_236010769
VERSION     WP_236010769.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium chungangense
  ORGANISM  Flavobacterium chungangense
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013300.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01120.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Flavobacterium chungangense"
                     /db_xref="taxon:554283"
     Protein         1..695
                     /product="alpha-L-fucosidase"
                     /GO_function="GO:0004560 - alpha-L-fucosidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=79757
     Region          10..474
                     /region_name="AfuC"
                     /note="Alpha-L-fucosidase [Carbohydrate transport and
                     metabolism]; COG3669"
                     /db_xref="CDD:442886"
     Region          505..560
                     /region_name="Fn3_assoc"
                     /note="Fn3 associated; pfam13287"
                     /db_xref="CDD:463829"
     Region          576..690
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
ORIGIN      
        1 mmnyrtnffr lltflswivs aysqvkapea ygpapsqnqm kwqemeyygf ihlsvntytd
       61 mswgkgdedp kifnptnldc rqwvrickea gmtgviltak hhsgfclwps kytdysvkns
      121 pwkngkgdim remadackey glklgvylsp wdrnhpdygk peyityfrnq ltelltnyge
      181 ifevwfdgan ggdgyyggan etrkidrkty ydwkntyalv rklqphiviw ndngdradlr
      241 wvgteagyvg ktnwsllnat gtvtenmlry gledgdswgp gevntsirpe wfyhvredsk
      301 vktvpqlmei yynsvgrngt lllnfpvmpd glihkndeka alefaqaqke afavnlakkv
      361 kveasnfken ntkfeaanvi dnnketfwtt dekvnsaslt itfdkpttfn rflvqeyirl
      421 gqrvksftve ayvkgewkel akettigykr ilcfptvett klrftindsk snpiistiei
      481 ynapqilipp tiireksgni siipadsese vyytlngsnp tpksnkytgq iktngkkaiv
      541 kaiaynpvte kgspvieekf diarkswkim nvndegayki ldgnpnsfwf qdktkmpvdl
      601 vidlgkaekl igfrylphqe lrskgiitny kfyvsqdnik welldegefs ninnnplwqn
      661 kmfkqvnary iklqalkntq dddivgyaev dvitn
//
LOCUS       WP_236011149             351 aa            linear   BCT 02-MAR-2025
DEFINITION  LysM peptidoglycan-binding domain-containing protein [Olleya
            sediminilitoris].
ACCESSION   WP_236011149
VERSION     WP_236011149.1
KEYWORDS    RefSeq.
SOURCE      Olleya sediminilitoris
  ORGANISM  Olleya sediminilitoris
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae.
REFERENCE   1  (residues 1 to 351)
  AUTHORS   Bateman,A. and Bycroft,M.
  TITLE     The structure of a LysM domain from E. coli membrane-bound lytic
            murein transglycosylase D (MltD)
  JOURNAL   J Mol Biol 299 (4), 1113-1119 (2000)
   PUBMED   10843862
REFERENCE   2  (residues 1 to 351)
  AUTHORS   Joris,B., Englebert,S., Chu,C.P., Kariyama,R., Daneo-Moore,L.,
            Shockman,G.D. and Ghuysen,J.M.
  TITLE     Modular design of the Enterococcus hirae muramidase-2 and
            Streptococcus faecalis autolysin
  JOURNAL   FEMS Microbiol Lett 70 (3), 257-264 (1992)
   PUBMED   1352512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01476.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Olleya sediminilitoris"
                     /db_xref="taxon:2795739"
     Protein         1..351
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=39469
     Region          <54..>184
                     /region_name="PRK13914"
                     /note="invasion associated endopeptidase"
                     /db_xref="CDD:237555"
     Region          74..113
                     /region_name="LysM"
                     /note="LysM domain; pfam01476"
                     /db_xref="CDD:396179"
     Region          <252..351
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
     Region          309..351
                     /region_name="LysM"
                     /note="LysM domain; pfam01476"
                     /db_xref="CDD:396179"
ORIGIN      
        1 mknilvivmf lsayltkaqd npeeflpiiv edkeafmstk tgeyvfrahd ktnaellktt
       61 pngvyyndii vhnvkqgetl ttlskkydid eaqikkdnll ksntlksgqk ikiinrvlvp
      121 ssspvisyag eerviaklrp gqspstiapp ptqstqvvvq asttdkttsp dakkviknks
      181 tyskplivpv vdnsednkie nhdskevaka ekklakakkk leaakrkeek akekerlkae
      241 kkarkevqqv vihekndavv sesfknelat iekeeekvke lvkiekqkes seakkniatn
      301 klqegvdyht vvkgdnlfrl skkynttvkk ltelnnvkfn nlqigqklkl k
//
LOCUS       WP_236011177             443 aa            linear   BCT 02-MAR-2025
DEFINITION  aspartyl protease family protein [Olleya sediminilitoris].
ACCESSION   WP_236011177
VERSION     WP_236011177.1
KEYWORDS    RefSeq.
SOURCE      Olleya sediminilitoris
  ORGANISM  Olleya sediminilitoris
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025034.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13650.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Olleya sediminilitoris"
                     /db_xref="taxon:2795739"
     Protein         1..443
                     /product="aspartyl protease family protein"
                     /calculated_mol_wt=49898
     Region          44..143
                     /region_name="Asp_protease_2"
                     /note="Aspartyl protease; pfam13650"
                     /db_xref="CDD:433378"
     Site            order(58,60,62,88..90,138)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133150"
     Site            58..60
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133150"
     Site            58
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133150"
     Site            order(88..91,95..98)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133150"
     Region          200..268
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Region          349..>439
                     /region_name="CtpA"
                     /note="C-terminal processing protease CtpA/Prc, contains a
                     PDZ domain [Posttranslational modification, protein
                     turnover, chaperones]; COG0793"
                     /db_xref="CDD:440556"
ORIGIN      
        1 mnrifiqlfl lfsltafsqs qyklvegvks dkirfqlvnn viiipvnvng vdlkflldtg
       61 vnksiifnfl kdsdslkiln akkiklkglg dgeyveavrs shntftigna inknqvffti
      121 ydsnlnfgpk lglpidgiig ydlfkdfive vnyssqyirl fdpfkykykr cakcdvvnms
      181 lfgnkpyiqg kveqdskelp vkllidsgss dafwlfenke kglrintsff ndflgaglsg
      241 svygkrskiq kfsigkftfd npkvaypdsl lvknltirhd rdgsiggevl krfnciidyq
      301 nakitlkkns lnklpfnynk sglqvendgv rlikeidvns sggglsvvng rivrveavvg
      361 psekyivkps ysikiiregs pgdlaglrin dviiyingrs thdmtlkelv syfykkagtk
      421 leikvlrygf ervfnfelks pie
//
LOCUS       WP_236011218             326 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Alicyclobacillus fructus].
ACCESSION   WP_236011218
VERSION     WP_236011218.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus fructus
  ORGANISM  Alicyclobacillus fructus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014428.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02369.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Alicyclobacillus fructus"
                     /db_xref="taxon:2816082"
     Protein         1..326
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=33155
     Region          <161..316
                     /region_name="COG3889"
                     /note="Extracellular solute-binding protein, contains
                     Ig-fold domain [General function prediction only]"
                     /db_xref="CDD:443097"
ORIGIN      
        1 mmprililif ailmtgagva vywvltahgs sqatqtldsd ayelwgqhsp aytvsinedn
       61 avvsetgvig mtlsltgnpt qllvgqtatl tgsasestng ytlgiydest gqwvtggseq
      121 tisasvsqqt pgthtyvlyl gtpggapiqs sspvqitwea yqisiqasps payigqtitv
      181 sgqvtaggsg vpnipvslqa sggnlaaanv ttnaqgqwst tftattpgty tltatvygqs
      241 ttttvqvqga tavtltatpv stapgnttvt ltaqanapla pnqtlsivdv ttgqtiagps
      301 nqqtlattyt lsqgatnqfv aylntn
//
LOCUS       WP_236011396             358 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6114 domain-containing protein [Alicyclobacillus fructus].
ACCESSION   WP_236011396
VERSION     WP_236011396.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus fructus
  ORGANISM  Alicyclobacillus fructus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 358)
  AUTHORS   Wehmeier,U.F. and Piepersberg,W.
  TITLE     Enzymology of aminoglycoside biosynthesis-deduction from gene
            clusters
  JOURNAL   Methods Enzymol 459, 459-491 (2009)
   PUBMED   19362651
REFERENCE   2  (residues 1 to 358)
  AUTHORS   Unwin,J., Standage,S., Alexander,D., Hosted,T. Jr., Horan,A.C. and
            Wellington,E.M.
  TITLE     Gene cluster in Micromonospora echinospora ATCC15835 for the
            biosynthesis of the gentamicin C complex
  JOURNAL   J Antibiot (Tokyo) 57 (7), 436-445 (2004)
   PUBMED   15376556
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039352.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19609.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Alicyclobacillus fructus"
                     /db_xref="taxon:2816082"
     Protein         1..358
                     /product="DUF6114 domain-containing protein"
                     /calculated_mol_wt=37316
     Region          228..333
                     /region_name="DUF6114"
                     /note="Family of unknown function (DUF6114); pfam19609"
                     /db_xref="CDD:466126"
ORIGIN      
        1 mtewrqnvfv qlsahtsqag stvaneeaep eaarrasepd egdrrspagh dgvgadreat
       61 ntpdlkqdlp pigdggadka atslqpsaas dgvprarrrr heavdpdlll pamaavsaae
      121 aaevsdgvdq aepsgdeega fnddlppgvl tptqivrgdp lrlpdddtrr rgrkvqsapr
      181 rggmvamdpe tvsvapapes spksretgvi vdveatettp aqpsskgfrr wrrtrpftag
      241 llsmlggviv aagpvsllhv vafsqssvpi gaavgilifi mgllewvfpf yalltgsitv
      301 vlalvslvva sfgglligml lslvggamav awrpaqpnkq ktrkskapnl pntpsasa
//
LOCUS       WP_236011511             797 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidoglycan-binding protein [Alicyclobacillus fructus].
ACCESSION   WP_236011511
VERSION     WP_236011511.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus fructus
  ORGANISM  Alicyclobacillus fructus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 797)
  AUTHORS   Briers,Y., Volckaert,G., Cornelissen,A., Lagaert,S., Michiels,C.W.,
            Hertveldt,K. and Lavigne,R.
  TITLE     Muralytic activity and modular structure of the endolysins of
            Pseudomonas aeruginosa bacteriophages phiKZ and EL
  JOURNAL   Mol Microbiol 65 (5), 1334-1344 (2007)
   PUBMED   17697255
REFERENCE   2  (residues 1 to 797)
  AUTHORS   Gooley,P.R., O'Connell,J.F., Marcy,A.I., Cuca,G.C., Salowe,S.P.,
            Bush,B.L., Hermes,J.D., Esser,C.K., Hagmann,W.K., Springer,J.P. et
            al.
  TITLE     The NMR structure of the inhibited catalytic domain of human
            stromelysin-1
  JOURNAL   Nat Struct Biol 1 (2), 111-118 (1994)
   PUBMED   7656014
REFERENCE   3  (residues 1 to 797)
  AUTHORS   Foster,S.J.
  TITLE     Cloning, expression, sequence analysis and biochemical
            characterization of an autolytic amidase of Bacillus subtilis 168
            trpC2
  JOURNAL   J Gen Microbiol 137 (8), 1987-1998 (1991)
   PUBMED   1683402
REFERENCE   4  (residues 1 to 797)
  AUTHORS   Dideberg,O., Charlier,P., Dive,G., Joris,B., Frere,J.M. and
            Ghuysen,J.M.
  TITLE     Structure of a Zn2+-containing D-alanyl-D-alanine-cleaving
            carboxypeptidase at 2.5 A resolution
  JOURNAL   Nature 299 (5882), 469-470 (1982)
   PUBMED   7121588
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013625.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01471.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Alicyclobacillus fructus"
                     /db_xref="taxon:2816082"
     Protein         1..797
                     /product="peptidoglycan-binding protein"
                     /calculated_mol_wt=83164
     Region          55..120
                     /region_name="PGRP"
                     /note="Peptidoglycan-binding (PGRP) domain of
                     peptidoglycan hydrolases [Cell wall/membrane/envelope
                     biogenesis]; COG3409"
                     /db_xref="CDD:442635"
     Region          162..527
                     /region_name="LytD"
                     /note="Beta- N-acetylglucosaminidase [Carbohydrate
                     transport and metabolism]; COG4193"
                     /db_xref="CDD:443347"
     Region          596..656
                     /region_name="PGRP"
                     /note="Peptidoglycan-binding (PGRP) domain of
                     peptidoglycan hydrolases [Cell wall/membrane/envelope
                     biogenesis]; COG3409"
                     /db_xref="CDD:442635"
ORIGIN      
        1 mvvkshrlla vmalpatlll sspalawaqt pssqsasvss tsvpvvaltl sdvqsypmls
       61 ygatgfyvev lqnalnalgy dvgqasgvfd satqkevkaf qqaeglqtdg vvgpltwgal
      121 akaladyrqv mtvlargssl vqhveakriv wngqliskpv gftyggtaym piwyvmealr
      181 kagiqsawag gvwtltppsg qavdytkisy gpgsaaiaig qtvvanvpav vypdpasgkl
      241 ttfmpvwyvm nalqrmgias twqgtewdlk papvvietgd pssnstgsst gnstganstg
      301 ngtgavpggn tvtnvtnatg pstgngtnvt gnttnatggn sstgnslgns tsnatgnsts
      361 ngtgnstgns tgnstggsnt lsftnvdlry papssinaqs inqfllqnss plnglgnsfm
      421 daqnlysvda nylvshaile sawgqsqial qknnlfgyga ydsnpgqdag vfpsddyair
      481 feawtvrmny ltpgaslyvs ptlsgmnvny ataktwasgi aavmkqfats vgssvsayvq
      541 yspsnnppap ksttepvyym ngaqgvtqpd syypnngvpy yasvaqgedq qffgqlsvgs
      601 fgepvtevqq flnktinagl tvdgqfgplt qaavkkfqsq vmhmsnptgv wtfsmwvqyi
      661 qpsqsnanli pagttvkide iaegmagpyv vpwyhvvgyg wvdsqyiklt nvyrvvvqnp
      721 agtattipvy qvgdlskvll nlhsgdwvva sssqpsggvy tiqiaaqdpt vsngyaadtl
      781 ltgvipangt vslvpqs
//
LOCUS       WP_236011649             149 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6011 domain-containing protein [Alicyclobacillus fructus].
ACCESSION   WP_236011649
VERSION     WP_236011649.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus fructus
  ORGANISM  Alicyclobacillus fructus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 149)
  AUTHORS   Stintzi,A., Johnson,Z., Stonehouse,M., Ochsner,U., Meyer,J.M.,
            Vasil,M.L. and Poole,K.
  TITLE     The pvc gene cluster of Pseudomonas aeruginosa: role in synthesis
            of the pyoverdine chromophore and regulation by PtxR and PvdS
  JOURNAL   J Bacteriol 181 (13), 4118-4124 (1999)
   PUBMED   10383985
REFERENCE   2  (residues 1 to 149)
  AUTHORS   Stintzi,A., Cornelis,P., Hohnadel,D., Meyer,J.M., Dean,C.,
            Poole,K., Kourambas,S. and Krishnapillai,V.
  TITLE     Novel pyoverdine biosynthesis gene(s) of Pseudomonas aeruginosa PAO
  JOURNAL   Microbiology (Reading) 142 (Pt 5), 1181-1190 (1996)
   PUBMED   8704959
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040299.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19474.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Alicyclobacillus fructus"
                     /db_xref="taxon:2816082"
     Protein         1..149
                     /product="DUF6011 domain-containing protein"
                     /calculated_mol_wt=16521
     Region          <3..29
                     /region_name="DUF6011"
                     /note="Family of unknown function (DUF6011); pfam19474"
                     /db_xref="CDD:466103"
ORIGIN      
        1 mlrcvrcgrp lrspssirhg agpacaklll rqigvegrms rgwsassder vrsllttegq
       61 vgaaesshrq tssnsarvts garlkqwtqr ienvrisrfe vshvtqkydn dfklhavqla
      121 lkghkpasei ardlrdired fvwvdgevs
//
LOCUS       WP_236011740             345 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF294 nucleotidyltransferase-like domain-containing protein
            [Alicyclobacillus fructus].
ACCESSION   WP_236011740
VERSION     WP_236011740.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus fructus
  ORGANISM  Alicyclobacillus fructus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015410.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03445.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Alicyclobacillus fructus"
                     /db_xref="taxon:2816082"
     Protein         1..345
                     /product="DUF294 nucleotidyltransferase-like
                     domain-containing protein"
                     /GO_function="GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA]"
                     /calculated_mol_wt=38239
     Region          <77..157
                     /region_name="DUF294"
                     /note="Putative nucleotidyltransferase DUF294; pfam03445"
                     /db_xref="CDD:460919"
     Region          211..338
                     /region_name="DUF294_C"
                     /note="Putative nucleotidyltransferase substrate binding
                     domain; pfam10335"
                     /db_xref="CDD:463050"
ORIGIN      
        1 mavnvpvcvt dardlcerga eiqrawceal ledesppeds tsfqrwfagf qvqrramvla
       61 gwretaseqv qsrariialg slargedlpq sdldfalvtd ghlslaeaap dverfvrwmg
      121 plgfapcmgn vmganprwfg eesawraria syaafpdwan vrylymtvda lplegaphwt
      181 piaaqvretl agspfmkwqm ahlgirgtvg fgslrgirwd aspggpalhi kdsflapmih
      241 alrllslhhg vdvlgsvdra lslgragalg dlpadgivqa lwfgwrlrar rhaqcwlrge
      301 resvdlvfrs elasawqeal rehlrtaqal erlvcqrfpk prgsr
//
LOCUS       WP_236011751             102 aa            linear   BCT 02-MAR-2025
DEFINITION  G1 family glutamic endopeptidase, partial [Alicyclobacillus
            fructus].
ACCESSION   WP_236011751
VERSION     WP_236011751.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus fructus
  ORGANISM  Alicyclobacillus fructus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 102)
  AUTHORS   Jensen,K., Ostergaard,P.R., Wilting,R. and Lassen,S.F.
  TITLE     Identification and characterization of a bacterial glutamic
            peptidase
  JOURNAL   BMC Biochem 11, 47 (2010)
   PUBMED   21122090
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01828.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Alicyclobacillus fructus"
                     /db_xref="taxon:2816082"
     Protein         <1..102
                     /product="G1 family glutamic endopeptidase"
                     /GO_function="GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          33..>99
                     /region_name="Peptidase_G1_like"
                     /note="Peptidases of the G1 family and homologs that might
                     lack peptidase activity; cl03371"
                     /db_xref="CDD:446078"
ORIGIN      
        1 rglsglrqap dslrqgwstf rlakwstfrl tntdvhgdwt vpnvynmnqp fgwaysctwv
       61 giggyntpdl vqagteqdfy vsqyytynsn yyawfevypl dy
//
LOCUS       WP_236011747             696 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Alicyclobacillus
            fructus].
ACCESSION   WP_236011747
VERSION     WP_236011747.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus fructus
  ORGANISM  Alicyclobacillus fructus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 696)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 696)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 696)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 696)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 696)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 696)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 696)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 696)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 696)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Alicyclobacillus fructus"
                     /db_xref="taxon:2816082"
     Protein         1..696
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=78796
     Region          183..330
                     /region_name="GGDEF"
                     /note="Diguanylate-cyclase (DGC) or GGDEF domain; cd01949"
                     /db_xref="CDD:143635"
     Site            order(213,256)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143635"
     Site            order(218,221..222,226,230,252,254..257)
                     /site_type="active"
                     /db_xref="CDD:143635"
     Site            order(248,276)
                     /site_type="active"
                     /note="I-site [active]"
                     /db_xref="CDD:143635"
     Region          340..>460
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          <480..680
                     /region_name="HDGYP"
                     /note="HD-GYP domain, c-di-GMP phosphodiesterase class II
                     (or its inactivated variant) [Signal transduction
                     mechanisms]; COG2206"
                     /db_xref="CDD:441808"
ORIGIN      
        1 mfvraaihal wislgvisal eflnmrqtwl rrknlyvlla dwlpygmlwt wlvwidgvgn
       61 vvlplytils aalhdpidwk rrasllgllv paavyglyqt isvqiegdvl iaiaacyilf
      121 rssirksywt yvavtgvtgv fcvvtmnpws lstfveamiv sgvfvlyehd avarsrikee
      181 rgrdpltgls nrrgaeewmr myegihgvav lidlddfkfv ndffghdvgd valrkvgcll
      241 sevsppqgvs vrwggdefli laeyetaeea krfvdglftq lctlevpltd grlplrcsvg
      301 aaygnigdtl itaadmallr vkqsgksavq wyqaeetegr eqlrvdqyaf qkafhqltqy
      361 cpapclatdv efrildvnea yervsgytrr vlrgqkpsil aagdwnrkwy peiqetlqmg
      421 hewtgilrnq rsdgtiwcge mmispvrige ltagywcivr rvftgdmtht elgtdimldq
      481 etaeymenif lqtlaevaew gdpelrghvl rvsrytewla srlaernvid pgdvpvlsva
      541 sithdigkva iareilfkph tlddaeylyv qrhteigeqi lqsvldkldd ihvrakrvve
      601 caktiagshh ewwngsgypr slkgdeipla grivaiadvl dallsrrpyk epwaldevrh
      661 yleaqsgtqf dpqfvsvlle ewttfeglvr evshmr
//
LOCUS       WP_236011775              36 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: SDR family oxidoreductase [Heyndrickxia].
ACCESSION   WP_236011775
VERSION     WP_236011775.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia
  ORGANISM  Heyndrickxia
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..36
                     /organism="Heyndrickxia"
                     /db_xref="taxon:2837504"
     Protein         1..36
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=3646
     Region          <5..36
                     /region_name="fabG"
                     /note="3-ketoacyl-(acyl-carrier-protein) reductase;
                     Validated; PRK05557"
                     /db_xref="CDD:235500"
ORIGIN      
        1 mvivqdianv vvflasafsd yitgqginvt ggmtmn
//
LOCUS       WP_236011794              18 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF645 family protein [Vibrio].
ACCESSION   WP_236011794
VERSION     WP_236011794.1
KEYWORDS    RefSeq.
SOURCE      Vibrio
  ORGANISM  Vibrio
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016746.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04875.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..18
                     /organism="Vibrio"
                     /db_xref="taxon:662"
     Protein         1..18
                     /product="DUF645 family protein"
                     /calculated_mol_wt=1780
ORIGIN      
        1 mstsqllald vclldafa
//
LOCUS       WP_236011816             340 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Vibrio paracholerae].
ACCESSION   WP_236011816
VERSION     WP_236011816.1
KEYWORDS    RefSeq.
SOURCE      Vibrio paracholerae
  ORGANISM  Vibrio paracholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 340)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 340)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 340)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Vibrio paracholerae"
                     /db_xref="taxon:650003"
     Protein         1..340
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=37578
     Region          33..328
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(133..134,137,175)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238568"
ORIGIN      
        1 mavifshpms rallmgclma clpsiaisqt qkspeilhnc gyplnlstpp ervitvgqas
       61 tellyrldlh drvigtsnwf tdvakefegv nakverladn fpsfesvisk rpdlvmadfl
      121 favgpqgvvg treqfqslgi tsyvldsecv gpssdgspta frldslfhsi knlahmfnvq
      181 akgdelirei rgreeaaitd aqqrnlnrls avfwfssadi kmdpwvagtt gvpawmmstl
      241 giknivdvpe ewpsvgwesi aranpdvivi admtrrrfda ddyqkkldfl rsdpvtrqms
      301 avvnnhivvm dahamratlr sieglehlvk tlslmnlagk
//
LOCUS       WP_236011833             168 aa            linear   BCT 02-MAR-2025
DEFINITION  D-lyxose/D-mannose family sugar isomerase [Enterococcus lactis].
ACCESSION   WP_236011833
VERSION     WP_236011833.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus lactis
  ORGANISM  Enterococcus lactis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 168)
  AUTHORS   De Rose,S.A., Kuprat,T., Isupov,M.N., Reinhardt,A., Schonheit,P.
            and Littlechild,J.A.
  TITLE     Biochemical and Structural Characterisation of a Novel D-Lyxose
            Isomerase From the Hyperthermophilic Archaeon Thermofilum sp
  JOURNAL   Front Bioeng Biotechnol 9, 711487 (2021)
   PUBMED   34422783
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 168)
  AUTHORS   Marles-Wright,J. and Lewis,R.J.
  TITLE     The structure of a D-lyxose isomerase from the sigmaB regulon of
            Bacillus subtilis
  JOURNAL   Proteins 79 (6), 2015-2019 (2011)
   PUBMED   21520290
REFERENCE   3  (residues 1 to 168)
  AUTHORS   van Staalduinen,L.M., Park,C.S., Yeom,S.J., Adams-Cioaba,M.A.,
            Oh,D.K. and Jia,Z.
  TITLE     Structure-based annotation of a novel sugar isomerase from the
            pathogenic E. coli O157:H7
  JOURNAL   J Mol Biol 401 (5), 866-881 (2010)
   PUBMED   20615418
REFERENCE   4  (residues 1 to 168)
  AUTHORS   Cho,E.A., Lee,D.W., Cha,Y.H., Lee,S.J., Jung,H.C., Pan,J.G. and
            Pyun,Y.R.
  TITLE     Characterization of a novel D-lyxose isomerase from Cohnella
            laevoribosii RI-39 sp. nov
  JOURNAL   J Bacteriol 189 (5), 1655-1663 (2007)
   PUBMED   17189362
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019031.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07385.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Enterococcus lactis"
                     /db_xref="taxon:357441"
     Protein         1..168
                     /product="D-lyxose/D-mannose family sugar isomerase"
                     /calculated_mol_wt=19385
     Region          4..163
                     /region_name="cupin_YdaE"
                     /note="D-lyxose isomerase YdaE, cupin domain; cd20308"
                     /db_xref="CDD:380442"
ORIGIN      
        1 mdykkrlqqm fldsgvvlke telerieytd fglgaieteg lnlfvyenne rycgkelvll
       61 pyqtcpehrh pprdenegkk etfrcrkglv ylyvegketk klsciipkgq eryytakkei
      121 ilhagdqyti epnikhwfqa gatdavitef ssssddpsds ftnpaiyr
//
LOCUS       WP_236011937             620 aa            linear   BCT 02-MAR-2025
DEFINITION  PRD domain-containing protein, partial [Enterococcus lactis].
ACCESSION   WP_236011937
VERSION     WP_236011937.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus lactis
  ORGANISM  Enterococcus lactis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 620)
  AUTHORS   Graille,M., Zhou,C.Z., Receveur-Brechot,V., Collinet,B.,
            Declerck,N. and van Tilbeurgh,H.
  TITLE     Activation of the LicT transcriptional antiterminator involves a
            domain swing/lock mechanism provoking massive structural changes
  JOURNAL   J Biol Chem 280 (15), 14780-14789 (2005)
   PUBMED   15699035
REFERENCE   2  (residues 1 to 620)
  AUTHORS   Declerck,N., Dutartre,H., Receveur,V., Dubois,V., Royer,C.,
            Aymerich,S. and van Tilbeurgh,H.
  TITLE     Dimer stabilization upon activation of the transcriptional
            antiterminator LicT
  JOURNAL   J Mol Biol 314 (4), 671-681 (2001)
   PUBMED   11733988
REFERENCE   3  (residues 1 to 620)
  AUTHORS   van Tilbeurgh,H. and Declerck,N.
  TITLE     Structural insights into the regulation of bacterial signalling
            proteins containing PRDs
  JOURNAL   Curr Opin Struct Biol 11 (6), 685-693 (2001)
   PUBMED   11751049
REFERENCE   4  (residues 1 to 620)
  AUTHORS   van Tilbeurgh,H., Le Coq,D. and Declerck,N.
  TITLE     Crystal structure of an activated form of the PTS regulation domain
            from the LicT transcriptional antiterminator
  JOURNAL   EMBO J 20 (14), 3789-3799 (2001)
   PUBMED   11447120
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013070.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00874.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Enterococcus lactis"
                     /db_xref="taxon:357441"
     Protein         <1..620
                     /product="PRD domain-containing protein"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
     Region          <1..604
                     /region_name="LevR"
                     /note="Transcriptional regulatory protein LevR, contains
                     PRD, AAA+ and EIIA domains [Transcription]; COG3933"
                     /db_xref="CDD:443134"
ORIGIN      
        1 ffitessild kelqvsyqmi dfllnsdleg nvgkikniik yacgnayvhq knsqtifvrl
       61 kdlpleynlk fkeqfskpkk kmsdrtylpn ttqqihlesk etqllrnffd evvsefkkvq
      121 kkesqpqefi edtvsrvtqm mdefifqgty ekeeslysvl tyhirqtldm myknygfeqd
      181 gnrvvslasy lylkdntdil dsdygwqeqk nelmefldsf letpfwyakk llsylsqqld
      241 qrlldedivf vtfyfyslqi sdlpndvkci vlahgystas slanvvnrml gknvfqaydm
      301 pinitldkve tkiiryindy stdsglillv dmgsfnqlge rlsnhikspl viidnvstpl
      361 vlevgehivn gnsvtevyea itvenriqkq liipevnkkk aiitccytgi gsatqiqeil
      421 qkclgdsake ltilpydykk laenkmyetp fqlyvvlmiv gtenpkinqv pyigldqlin
      481 geavsefael lheqvdidse afksqlifnf sinkivenlt ildamkvlrl vqkavkelek
      541 lmgiefsnnq lfllymhccs mierilrkes vdeqadikey iqkeghnmel ihqafqevek
      601 eytielplle lrllndivkd
//
LOCUS       WP_236011983             494 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3336 domain-containing protein [Marinobacter mangrovi].
ACCESSION   WP_236011983
VERSION     WP_236011983.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter mangrovi
  ORGANISM  Marinobacter mangrovi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023243.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11815.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Marinobacter mangrovi"
                     /db_xref="taxon:2803918"
     Protein         1..494
                     /product="DUF3336 domain-containing protein"
                     /GO_function="GO:0004806 - triacylglycerol lipase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=56205
     Region          6..139
                     /region_name="DUF3336"
                     /note="Domain of unknown function (DUF3336); pfam11815"
                     /db_xref="CDD:432096"
     Region          77..470
                     /region_name="Pat_TGL3-4-5_SDP1"
                     /note="Triacylglycerol lipase 3, 4, and 5 and
                     Sugar-Dependent 1 lipase; cd07206"
                     /db_xref="CDD:132845"
     Site            order(153..154,156,181,321)
                     /site_type="active"
                     /db_xref="CDD:132845"
     Site            179..183
                     /site_type="other"
                     /note="nucleophile elbow"
                     /db_xref="CDD:132845"
ORIGIN      
        1 mmiaagkiek yrkrlaqapn yemwkaaale ldylegnvew keenpsdlyh yeliydrlth
       61 lreyhqnqdy erlrralreg lhhdlgnmgn palysrsrvg tkhlietyin qvcesldflc
      121 dqpipgfipe aklrffqdtl tsygrpalll sggaslgtfh lgvikalwer gllpqtiags
      181 svgaivagil gthtdaeipd lfnpethhlk awkwngllrg lngqgfmdqk qllanlranm
      241 geytfeeafd rtgrsinisv spvqanqksr llcgytspyl lvwsaalasa avpgifppvt
      301 lmkkdlqgav lpymprlkfv dgsvvsdlpv erlmhlydvn ytivsqsnph vvpflnrrgr
      361 deklgllnlp mhvlksevqf hgtglfdylr krvqpelfrq vaghlytima qrysgditia
      421 physwrhysq mlsnpspafi rqmmlegera twpkismirs hakisktler ciqrvrdqmq
      481 srrgdlrlvs sqet
//
LOCUS       WP_236012375             746 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Marinobacter mangrovi].
ACCESSION   WP_236012375
VERSION     WP_236012375.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter mangrovi
  ORGANISM  Marinobacter mangrovi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (residues 1 to 746)
  AUTHORS   Das,A.K., Cohen,P.W. and Barford,D.
  TITLE     The structure of the tetratricopeptide repeats of protein
            phosphatase 5: implications for TPR-mediated protein-protein
            interactions
  JOURNAL   EMBO J 17 (5), 1192-1199 (1998)
   PUBMED   9482716
REFERENCE   2  (residues 1 to 746)
  AUTHORS   Lamb,J.R., Tugendreich,S. and Hieter,P.
  TITLE     Tetratrico peptide repeat interactions: to TPR or not to TPR?
  JOURNAL   Trends Biochem Sci 20 (7), 257-259 (1995)
   PUBMED   7667876
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019339.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07719.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Marinobacter mangrovi"
                     /db_xref="taxon:2803918"
     Protein         1..746
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=82376
     Region          181..>388
                     /region_name="decahem_SO"
                     /note="decaheme c-type cytochrome, DmsE family; TIGR03508"
                     /db_xref="CDD:274618"
     Region          337..360
                     /region_name="Paired_CXXCH_1"
                     /note="Doubled CXXCH motif (Paired_CXXCH_1); pfam09699"
                     /db_xref="CDD:462851"
     Region          468..>682
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          583..611
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(584,587..588,591..592,594,618,621..622,625..626,
                     628..629,652,655..656,659..660,663)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          616..646
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          640..>738
                     /region_name="NrfG"
                     /note="Cytochrome c-type biogenesis protein CcmH/NrfG
                     [Energy production and conversion, Posttranslational
                     modification, protein turnover, chaperones]; COG4235"
                     /db_xref="CDD:443378"
     Region          651..677
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          719..746
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mrvfwsllcg vlflaghawa dtssskagta ptrdagqgyv gaaacagcha teqadwygsd
       61 hdlamqpatp ttvlgnfkda tfdyfgttst ffrkddtfyv rtdgpdgkla dfaiaytfgv
      121 yplqqyliel pggrlqalgi vwdtrkksag gqrwyhlypd epvragdrlh wtgrdqnwnf
      181 mcadchstnl qknydldsrt yattwseidv gceachgpgk dhleamqaen wslphngfkl
      241 slaraeskvw ttnpetgnpy pwtagpeaqp elevcaqchs rranqfhgar pedglfnhfm
      301 palldeglyh adgqidgevy vygsflqskm yqsgvtcsdc hnphslklka rgntlcaqch
      361 lptkydtdah hghpagsega qcvnchmpek tymgvddrrd hsfriprpdl svslgvpnac
      421 trchtdrdae waanelekrh gkppaghfar aihagryggp qaeqllseli ldsaqpaiar
      481 ataltllpgy lsnqsapvlq qasrsedpli algtsqalng ipeqyrpafg lpelydahrv
      541 iralaasnma pstipanpve vqvryeqard eymasqrfng drpeslvnlg dvsgqagqfd
      601 eaaqyyrtai elapdytpay vnfadflrrq grdgdgqqvl eqaldqvvdp apiehslgll
      661 mvrqqrhdaa lehlrkaama ptatsryiyv yavalqstge tqqavdvlea ayhrfpgnrq
      721 flsalvsfnr elgndakadw yenqlr
//
LOCUS       WP_236012398             236 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2931 family protein [Marinobacter mangrovi].
ACCESSION   WP_236012398
VERSION     WP_236012398.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter mangrovi
  ORGANISM  Marinobacter mangrovi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022602.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11153.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Marinobacter mangrovi"
                     /db_xref="taxon:2803918"
     Protein         1..236
                     /product="DUF2931 family protein"
                     /calculated_mol_wt=26458
     Region          117..>227
                     /region_name="DUF2931"
                     /note="Protein of unknown function (DUF2931); pfam11153"
                     /db_xref="CDD:431686"
ORIGIN      
        1 mqikhprdlt lrdllriesp efapsslpln taiaspslse alnladdftg spyrsrprah
       61 gssqdnvagl tfresqpycs cqcagermkh fvflaalaat tlsiqgcssl eandkhwsys
      121 vaapehcrvr vehlefeksg erhwrmpvgg veccwkgdng pigpggsmrp fpnyigiqwf
      181 cfadqkyyqr lvisihppnh hhrflhrqps fhgrpprqta lrlaispfiq slpiya
//
LOCUS       WP_236012443              36 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Methylobacterium ajmalii].
ACCESSION   WP_236012443
VERSION     WP_236012443.1
KEYWORDS    RefSeq.
SOURCE      Methylobacterium ajmalii
  ORGANISM  Methylobacterium ajmalii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
REFERENCE   1  (residues 1 to 36)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..36
                     /organism="Methylobacterium ajmalii"
                     /db_xref="taxon:2738439"
     Protein         1..>36
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>36
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 makekfsrtk phcnigtigh vdhgktslta aitkvl
//
LOCUS       WP_236012487             496 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase, partial [Methylobacterium ajmalii].
ACCESSION   WP_236012487
VERSION     WP_236012487.1
KEYWORDS    RefSeq.
SOURCE      Methylobacterium ajmalii
  ORGANISM  Methylobacterium ajmalii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024867.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13476.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Methylobacterium ajmalii"
                     /db_xref="taxon:2738439"
     Protein         1..>496
                     /product="AAA family ATPase"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /GO_process="GO:0006302 - double-strand break repair
                     [Evidence IEA]"
     Region          <51..493
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          233..>364
                     /region_name="SbcC"
                     /note="DNA repair exonuclease SbcCD ATPase subunit
                     [Replication, recombination and repair]; COG0419"
                     /db_xref="CDD:440188"
ORIGIN      
        1 mttalttapa padrlealtr agrllarlea ardrdretla artrevaaak grlaqrdavd
       61 tylrelqqea nrrsvatfet lltalvqevl pgekpvrldl tterglpald igverpdggr
      121 edvledngga mtnvvgmalr liavvkagvg rflaldeadc wiapdrvpaf yrvleesaak
      181 lgvqclaish hdvagfgadl tvsriagrpe tgvaivgpaa scaaawtper pgfrylrlvd
      241 vqgfsdatlp lapgvnalvg pnnhgkstvi ralravfyge vrdslvraga naarveigva
      301 dgrvlryarq pkrtpvnlws lheadgslvr engttletgg rdvpswverl fgitrvedld
      361 vhvahqkfpv fllgekparr savlsigrea glvrdmqalq rervtedqrt iregereiar
      421 lrealsaldd ldaleeslag lrrqadalsa aearlcdrea ladrlarsgr latgaaarar
      481 vladlpapet gaeigr
//
LOCUS       WP_236012519             141 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein, partial [Methylobacterium
            ajmalii].
ACCESSION   WP_236012519
VERSION     WP_236012519.1
KEYWORDS    RefSeq.
SOURCE      Methylobacterium ajmalii
  ORGANISM  Methylobacterium ajmalii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Methylobacterium ajmalii"
                     /db_xref="taxon:2738439"
     Protein         1..>141
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
     Region          4..>141
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
ORIGIN      
        1 mntighfvgg aqipgrsgrt apvfnpatge qsgsvalagt devgaavaaa raafpawaat
       61 pplrrariln kflriledri delaavitae hgkvlsdakg eiqrgmevve fatgapqllk
      121 geitenvgtr vdssairqpl g
//
LOCUS       WP_236012560             389 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: SRPBCC domain-containing protein [Methylobacterium].
ACCESSION   WP_236012560
VERSION     WP_236012560.1
KEYWORDS    RefSeq.
SOURCE      Methylobacterium
  ORGANISM  Methylobacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae.
REFERENCE   1  (residues 1 to 389)
  AUTHORS   Stark,J.L., Mercier,K.A., Mueller,G.A., Acton,T.B., Xiao,R.,
            Montelione,G.T. and Powers,R.
  TITLE     Solution structure and function of YndB, an AHSA1 protein from
            Bacillus subtilis
  JOURNAL   Proteins 78 (16), 3328-3340 (2010)
   PUBMED   20818668
REFERENCE   2  (residues 1 to 389)
  AUTHORS   Lotz,G.P., Lin,H., Harst,A. and Obermann,W.M.
  TITLE     Aha1 binds to the middle domain of Hsp90, contributes to client
            protein activation, and stimulates the ATPase activity of the
            molecular chaperone
  JOURNAL   J Biol Chem 278 (19), 17228-17235 (2003)
   PUBMED   12604615
REFERENCE   3  (residues 1 to 389)
  AUTHORS   Panaretou,B., Siligardi,G., Meyer,P., Maloney,A., Sullivan,J.K.,
            Singh,S., Millson,S.H., Clarke,P.A., Naaby-Hansen,S., Stein,R.,
            Cramer,R., Mollapour,M., Workman,P., Piper,P.W., Pearl,L.H. and
            Prodromou,C.
  TITLE     Activation of the ATPase activity of hsp90 by the stress-regulated
            cochaperone aha1
  JOURNAL   Mol Cell 10 (6), 1307-1318 (2002)
   PUBMED   12504007
REFERENCE   4  (residues 1 to 389)
  AUTHORS   Sevier,C.S. and Machamer,C.E.
  TITLE     p38: A novel protein that associates with the vesicular stomatitis
            virus glycoprotein
  JOURNAL   Biochem Biophys Res Commun 287 (2), 574-582 (2001)
   PUBMED   11554768
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08327.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Methylobacterium"
                     /db_xref="taxon:407"
     Protein         1..389
                     /product="SRPBCC domain-containing protein"
                     /calculated_mol_wt=42388
     Region          17..151
                     /region_name="YndB"
                     /note="Chalcone/flavanone-binding protein YndB,
                     AHSA1/START/SRPBCC domain [Lipid transport and
                     metabolism]; COG3832"
                     /db_xref="CDD:443044"
     Region          200..366
                     /region_name="COG3576"
                     /note="Predicted flavin-nucleotide-binding protein,
                     pyridoxine 5'-phosphate oxidase superfamily [General
                     function prediction only]"
                     /db_xref="CDD:442796"
ORIGIN      
        1 msatmsddts dapriaialv rqldaaaalv fdactdprrl arwltpgage vraasgdlrv
       61 ggrfslegcn pdggayavsg eyleivparr ivmtwhyaga gplggppsrv qidlrplgad
      121 vteltlshtr ldrqdaadry raawaicler lhwstaprpe eavftpplga isnlygarhr
      181 afqetfetgd lanrlrslsv trelnpaqrv fvegrdmvfv tsidhrgfpt csykggapgf
      241 vrvvdprrle lpiydgngmy ltagnlaana klgllfidfe tphrlrlhgt aqvlrdapsl
      301 arhpeaelvv aiaiaevfvn cpryvhryrr eansafvpgq dragavpawk ridvfgdvlp
      361 grdraalgad dvgsltldey rallrrget
//
LOCUS       WP_236012715             322 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: metal ABC transporter solute-binding protein, Zn/Mn
            family [Methylobacterium].
ACCESSION   WP_236012715
VERSION     WP_236012715.1
KEYWORDS    RefSeq.
SOURCE      Methylobacterium
  ORGANISM  Methylobacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae.
REFERENCE   1  (residues 1 to 322)
  AUTHORS   Ilari,A., Alaleona,F., Tria,G., Petrarca,P., Battistoni,A.,
            Zamparelli,C., Verzili,D., Falconi,M. and Chiancone,E.
  TITLE     The Salmonella enterica ZinT structure, zinc affinity and
            interaction with the high-affinity uptake protein ZnuA provide
            insight into the management of periplasmic zinc
  JOURNAL   Biochim Biophys Acta 1840 (1), 535-544 (2014)
   PUBMED   24128931
REFERENCE   2  (residues 1 to 322)
  AUTHORS   Gabbianelli,R., Scotti,R., Ammendola,S., Petrarca,P., Nicolini,L.
            and Battistoni,A.
  TITLE     Role of ZnuABC and ZinT in Escherichia coli O157:H7 zinc
            acquisition and interaction with epithelial cells
  JOURNAL   BMC Microbiol 11, 36 (2011)
   PUBMED   21338480
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 322)
  AUTHORS   Lee,Y.H., Deka,R.K., Norgard,M.V., Radolf,J.D. and Hasemann,C.A.
  TITLE     Treponema pallidum TroA is a periplasmic zinc-binding protein with
            a helical backbone
  JOURNAL   Nat Struct Biol 6 (7), 628-633 (1999)
   PUBMED   10404217
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013465.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01297.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Methylobacterium"
                     /db_xref="taxon:407"
     Protein         1..322
                     /product="metal ABC transporter solute-binding protein,
                     Zn/Mn family"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=33566
     Region          43..321
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(110..111,114,169)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238347"
ORIGIN      
        1 mrgvrfamll lalvlgwgap agaqtagaas aagepaktdp gkaeptrvva tfsilgdlvr
       61 qvggervavt tlvgpngdah sfvpapadaq avaaarlvvv nglgfegwid rlikasgtka
      121 tvvvaargvv pieedegaqd hshahdhavd phawqnvana kryvaairdg lsaadpagka
      181 ayaanatayl aqldaldaei rtaltaipea rrrivtthda fgyfakaygl rflapqgvss
      241 qseatardva aivrqvrrdr ipavflenvs dprlmqqvar esgakaggrv fsdalsepgg
      301 pattyldmmr hnvrefvaal ke
//
LOCUS       WP_236012760             406 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: FAD-dependent oxidoreductase [Methylobacterium].
ACCESSION   WP_236012760
VERSION     WP_236012760.1
KEYWORDS    RefSeq.
SOURCE      Methylobacterium
  ORGANISM  Methylobacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae.
REFERENCE   1  (residues 1 to 406)
  AUTHORS   Todone,F., Vanoni,M.A., Mozzarelli,A., Bolognesi,M., Coda,A.,
            Curti,B. and Mattevi,A.
  TITLE     Active site plasticity in D-amino acid oxidase: a crystallographic
            analysis
  JOURNAL   Biochemistry 36 (19), 5853-5860 (1997)
   PUBMED   9153426
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013434.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01266.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Methylobacterium"
                     /db_xref="taxon:407"
     Protein         1..406
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=43129
     Region          16..405
                     /region_name="PRK08163"
                     /note="3-hydroxybenzoate 6-monooxygenase"
                     /db_xref="CDD:181262"
ORIGIN      
        1 malpaapgrp vadrpglrva ivgagigglt aalalaargh avtlverria fsevgaglql
       61 spnasrvltd lglglplrrv agepervrir giahgreiga ialgaamrer fgapywvvhr
      121 adlqtillda argrpgirll vgrtvagvrd apdqatltlt sdggrsetle adlvvaadgv
      181 rsglraaldr rplrprgesa wratlpreav pevfladetg lwlgprrhvv hypinagrrl
      241 nlvavmpdqp ggedwagagd parlraafad aappladlla rpeswlvwpl tdraaarpma
      301 rgriallgda ahpvlpflaq gaamaiedaa vlahsleadr pvpaalsaya aariervrli
      361 qsharrngrv yhagplvaaa rdlvmgrlrp ekmteryawl ygwrpt
//
LOCUS       WP_236012801             480 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: amino acid permease [Methylobacterium].
ACCESSION   WP_236012801
VERSION     WP_236012801.1
KEYWORDS    RefSeq.
SOURCE      Methylobacterium
  ORGANISM  Methylobacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Methylobacterium"
                     /db_xref="taxon:407"
     Protein         1..480
                     /product="amino acid permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=51071
     Region          43..467
                     /region_name="2A0306"
                     /note="amino acid transporter; TIGR00909"
                     /db_xref="CDD:129987"
ORIGIN      
        1 mrtkpidrlr qdaegsghal ertigplsli glgigaiiga glfsltgiaa aenagpavvi
       61 sfaiaaigca lagmcysela smipvsgsay tyayatmgef vawiigwdlv leyavgaatv
      121 svswskyvas llqdwgitlp prllhspfem itladgssvh glvnlpavli lclislllmr
      181 gvrestrvns vivvikvavv lavvgvglfy vkaqnyvpfi pdntgtfgey gwsgimraag
      241 vvffayigfd avstaaqevk npqrtmmvgi lgslavctvl yiafaavltg lvpyasmkgd
      301 aapvataikq tpfpwlqtlv tlgviagftt vmlvllygqs rvfyamandr llpkffaaih
      361 ptwrtpyrsn lffmvfaall ggltpistlg hmtsigtlla fiivcagvvi mrrthpdepr
      421 gyrvplvpvv paagilvcla mmlsldgetw lrlvvwlaig laiyfgygrr hsrvgrdaar
//
LOCUS       WP_236012806             350 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: transglycosylase SLT domain-containing protein
            [Methylobacterium].
ACCESSION   WP_236012806
VERSION     WP_236012806.1
KEYWORDS    RefSeq.
SOURCE      Methylobacterium
  ORGANISM  Methylobacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae.
REFERENCE   1  (residues 1 to 350)
  AUTHORS   Koraimann,G.
  TITLE     Lytic transglycosylases in macromolecular transport systems of
            Gram-negative bacteria
  JOURNAL   Cell Mol Life Sci 60 (11), 2371-2388 (2003)
   PUBMED   14625683
REFERENCE   2  (residues 1 to 350)
  AUTHORS   Mushegian,A.R., Fullner,K.J., Koonin,E.V. and Nester,E.W.
  TITLE     A family of lysozyme-like virulence factors in bacterial pathogens
            of plants and animals
  JOURNAL   Proc Natl Acad Sci U S A 93 (14), 7321-7326 (1996)
   PUBMED   8692991
REFERENCE   3  (residues 1 to 350)
  AUTHORS   Thunnissen,A.M., Rozeboom,H.J., Kalk,K.H. and Dijkstra,B.W.
  TITLE     Structure of the 70-kDa soluble lytic transglycosylase complexed
            with bulgecin A. Implications for the enzymatic mechanism
  JOURNAL   Biochemistry 34 (39), 12729-12737 (1995)
   PUBMED   7548026
REFERENCE   4  (residues 1 to 350)
  AUTHORS   Koonin,E.V. and Rudd,K.E.
  TITLE     A conserved domain in putative bacterial and bacteriophage
            transglycosylases
  JOURNAL   Trends Biochem Sci 19 (3), 106-107 (1994)
   PUBMED   8203016
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013618.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01464.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Methylobacterium"
                     /db_xref="taxon:407"
     Protein         1..350
                     /product="transglycosylase SLT domain-containing protein"
                     /calculated_mol_wt=37491
     Region          141..>242
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
ORIGIN      
        1 magahgdvls fgnraahggv pvmartilaa gclaaglsal lhqygaelvt arpavtmmad
       61 llvmptpriq iqtaqaraaq psapaiaplr epihdldtal gssgvdrvsy ddllaastgg
      121 dpnevltfgp mrirrhlvqt ivraaatvrt dpvllmavad kessfltevq artssatgly
      181 qfiertwlqv mrefgprhgy areaaligdd ngvadaaera rildlrrdps lsavmageml
      241 krdsariaar igrdltlget ylahflgpdd aerfmakvve epkaeaaall pkpakanrpi
      301 fyervgrrka rsltvaqvhd kfeammstrg aryrdvgalm gvmayaaetp
//
LOCUS       WP_236013092             150 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein, partial [Heyndrickxia
            sporothermodurans].
ACCESSION   WP_236013092
VERSION     WP_236013092.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia sporothermodurans
  ORGANISM  Heyndrickxia sporothermodurans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024908.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13518.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Heyndrickxia sporothermodurans"
                     /db_xref="taxon:46224"
     Protein         <1..150
                     /product="helix-turn-helix domain-containing protein"
     Region          26..>141
                     /region_name="transpos_IS3"
                     /note="IS3 family transposase; NF033516"
                     /db_xref="CDD:468052"
ORIGIN      
        1 nwvknyenfg aeslmskkhe ksysvqfkld vlrfmkrtgs svidsalqfg itnppmisrw
       61 kkefleggae algkpkgrsp msdkgtsksn knkhveekem tyeqkleren ellrleveyl
      121 kklrafqmdp vgylekhrqh yhsnskknln
//
LOCUS       WP_236013167             383 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Paenibacillus glycanilyticus].
ACCESSION   WP_236013167
VERSION     WP_236013167.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycanilyticus
  ORGANISM  Paenibacillus glycanilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Paenibacillus glycanilyticus"
                     /db_xref="taxon:126569"
     Protein         1..383
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=41221
     Region          3..371
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(7..8,11..12,15,47,98..99,101..103,106,125,128..129,
                     132,204,207..208,211..213,216,243,247,297..298,302,306,
                     322,325..326,329..330,333)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mtvtlmfwia mytyvptlsp ylssrglsld ligvvlgsyg fvqllirfpl gmlsdrygkr
       61 kpfillgmla asvscllfii pgswlwplag ramaglcast wvaftvmyan yfaaedatka
      121 mgnisvmtvs gqmigmllsg wmsegfgada pfvlgavigg iglllalvih epakplhers
      181 gisfskiqsv irtklllqva llsllahcvl fitmfgftpl kaedmggsgl eltllvfafm
      241 aphalasmft arwfaprfgn wttigtgfil saictvsicy vhsiwilmlt qmingfaqgl
      301 hiplllglai rdvdppgrat amglyqavya agmfagpfla gwlneswgln sgfalggmfg
      361 liaaalclvy yrsdrkliks ind
//
LOCUS       WP_236013205            1554 aa            linear   BCT 02-MAR-2025
DEFINITION  X2-like carbohydrate binding domain-containing protein
            [Paenibacillus glycanilyticus].
ACCESSION   WP_236013205
VERSION     WP_236013205.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycanilyticus
  ORGANISM  Paenibacillus glycanilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 1554)
  AUTHORS   Kosugi,A., Amano,Y., Murashima,K. and Doi,R.H.
  TITLE     Hydrophilic domains of scaffolding protein CbpA promote glycosyl
            hydrolase activity and localization of cellulosomes to the cell
            surface of Clostridium cellulovorans
  JOURNAL   J Bacteriol 186 (19), 6351-6359 (2004)
   PUBMED   15375114
REFERENCE   2  (residues 1 to 1554)
  AUTHORS   Mosbah,A., Belaich,A., Bornet,O., Belaich,J.P., Henrissat,B. and
            Darbon,H.
  TITLE     Solution structure of the module X2 1 of unknown function of the
            cellulosomal scaffolding protein CipC of Clostridium cellulolyticum
  JOURNAL   J Mol Biol 304 (2), 201-217 (2000)
   PUBMED   11080456
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015407.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03442.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1554
                     /organism="Paenibacillus glycanilyticus"
                     /db_xref="taxon:126569"
     Protein         1..1554
                     /product="X2-like carbohydrate binding domain-containing
                     protein"
                     /calculated_mol_wt=164847
     Region          46..363
                     /region_name="GH27"
                     /note="glycosyl hydrolase family 27 (GH27); cd14792"
                     /db_xref="CDD:269893"
     Site            order(53,93..94,134,205,207,243,262,266)
                     /site_type="active"
                     /db_xref="CDD:269893"
     Region          374..449
                     /region_name="Melibiase_C"
                     /note="Alpha galactosidase C-terminal beta sandwich
                     domain; pfam17801"
                     /db_xref="CDD:465512"
     Region          557..661
                     /region_name="CE2_N"
                     /note="Carbohydrate esterase 2 N-terminal; pfam17996"
                     /db_xref="CDD:465608"
     Region          660..740
                     /region_name="CBM_X2"
                     /note="Carbohydrate binding domain X2; pfam03442"
                     /db_xref="CDD:427295"
     Region          747..829
                     /region_name="CBM_X2"
                     /note="Carbohydrate binding domain X2; pfam03442"
                     /db_xref="CDD:427295"
     Region          967..1037
                     /region_name="CBM_X2"
                     /note="Carbohydrate binding domain X2; pfam03442"
                     /db_xref="CDD:427295"
     Region          1055..>1118
                     /region_name="CE2_N"
                     /note="Carbohydrate esterase 2 N-terminal; pfam17996"
                     /db_xref="CDD:465608"
     Region          1415..1456
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          1474..1514
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
ORIGIN      
        1 msvnakrrnr awmgillvva vlaqigfipp rtnvaeaadn glaqkpymgw ssysmqvydg
       61 psgnwisedk iklmsdtmhe klqshgyeyi nidagwngsm deygrpvpst ekypngfenl
      121 idyvhangqk vgiymipgis pdavqrdlpi ygapgctigd iavkpykygd ywnlgykidf
      181 snpcaqkwvd svadliaswg vdfvkfdsvt pgsghndesi dargdvkaws ealskhgiwl
      241 elswaldhny vdywkkyang wridwdveay dpnigmtqwa niarlfpgaa lwwrdagpgg
      301 wndfdslnvg ngetsgltkd erqtaatlwa asaaqfytgd dltnlddygl slytndevia
      361 vnqaghpihp vsmdtdqqaw yanngdgtyt valfnlgskg arvgvkwsdi glsgtgsird
      421 lwnhkemgss atgidplfle phasrlfkvt vqngtsivnd ddtgmkytge wtrnggnelv
      481 rdaqdlsvvi tdspgsgsgt svdtgagtgg dsgsadgssg seeaaassyt vtindddpai
      541 ayankwghst grsfgdymgd vhygepdgse peltytfegt giellseqst ssgkidiyid
      601 gnfhstvdsy gndqvgqhsv fsvadlpqgt htlravrnag gqyyflfdaf kvtadtllgs
      661 psatsfnkda paditiplnl gassftgisn gtaslqsgtd ytvssgvvti kssylaqqas
      721 gqsaalsfkf aggaaqtlsv avsgtsispv sasfdkrpaa qadlavtltl gdsneltgvk
      781 nganaltagt dyavdgnvvr iaksylaslp lgdaslsfef sgssprtlsl tvlnsaspgr
      841 yvfvnnddpg irytgswnrs sgrglgdykd dvqwtennds fftytfqgtg idyitevdeg
      901 qgnveiyidg vsqgnvstye agahnapqrt vytvrgltng fhtikavkks gkfmlldalr
      961 vqlpdlidvs stdfaknapa dvsvnllasp dslsgiyngg aalvrgtdyt iddhvltikq
     1021 qylaaqpvgt tkltlrfrgd ygddahasaa egaafsytfk gtgiellspv gpkqgemevy
     1081 idgelkktvn ayadsrdsqv slysvsglta gshtirvvnk sgelmladal rftaaeasvp
     1141 pvsgggghat ppvepaapkv irttqpdgtv rdeltlaate akalidarka sgasalklvv
     1201 pdskgqaaet avkldaeavk qlaasgldld idvsgakihv pnavlknvnt evhfvispvn
     1261 ekkaqlerra nlstvvsaav kdskitvigi padidtnlpe gettlvlplp agdwsseals
     1321 higvfiehsd gtveykqgtv vdveggkgiq fknskfstfa lvklgeasgs apaaymngfe
     1381 gnlfkpekai traelatils riaqdantge dsraysdvkq gywaadairk ataaglmngy
     1441 tdgtfrpeka itraemaqla vrlagggskl gagfadttgh wseqavkaae gagyikgyad
     1501 gtfrpdrtls raeavvvinr slgitpsgsg afswkdvpas ywaygdieaa siqk
//
LOCUS       WP_236013237             555 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6385 domain-containing protein [Paenibacillus glycanilyticus].
ACCESSION   WP_236013237
VERSION     WP_236013237.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycanilyticus
  ORGANISM  Paenibacillus glycanilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040075.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19912.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Paenibacillus glycanilyticus"
                     /db_xref="taxon:126569"
     Protein         1..555
                     /product="DUF6385 domain-containing protein"
                     /calculated_mol_wt=52117
     Region          <5..>555
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          470..554
                     /region_name="DUF6385"
                     /note="Domain of unknown function (DUF6385); pfam19912"
                     /db_xref="CDD:437744"
ORIGIN      
        1 mpnfstfnpn pdnlrtlifg kdstdtarpl avdtsgnlvt vmldgtissi lgvtitagtv
       61 aisggtvgvt gtvavsggtv datitggtis avlgttitag tvaisggtva vsggtvavsg
      121 gtvavsgatv tggtvdavlg atitagtina vlgttitagt vaisggtvav sggtfeiagg
      181 tvavsgatit agtldallga titagtldal lgatitagti tavlgttita gtvavsggtv
      241 alsggtvavs gatitagtld allgatitag tltavlgtti tagtvaisgg tvalsggtva
      301 vsgatitagt ldallgatit agtltavlgt titagtvavs aatitggtln avlgttitgg
      361 tvavsgatit agtlnallga titagtltav lgttitagtv avsaatitgg tlnavlgtti
      421 tagtvtallg atitagtlss vtsisqksfq evanlnnlta daytavpait tsvfgtysyf
      481 vynkgpgtna atarveisan gtnwytdves vtgiavgsvd vlvpqrflky trlayrsttt
      541 gspttvdvyf ngqgt
//
LOCUS       WP_236013239             239 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Paenibacillus
            glycanilyticus].
ACCESSION   WP_236013239
VERSION     WP_236013239.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycanilyticus
  ORGANISM  Paenibacillus glycanilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 239)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Paenibacillus glycanilyticus"
                     /db_xref="taxon:126569"
     Protein         1..239
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=26890
     Region          21..232
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(26,28..29,31,52..54,90..92,130..132,145,149,
                     169..172)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(107,132,145,149)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 miankgemre meekpakpki kaivtgatgm vgegvlmecl lhpdvervlv itrrpcgvah
       61 pklkeiihkd fhdltpiqde lkgynacyfc lgvssigmse adytrvtydl tmhvarllss
      121 lnpdmvfcyv tgggtdsteq gksmwarikg rtenhllqlp frrafmfrpg ymhpskgqvr
      181 vpkwakaltw lypilrplfp nqlitlrqvg lamiqtsytd ydrhildpkd iialakegs
//
LOCUS       WP_236013242             245 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Paenibacillus
            glycanilyticus].
ACCESSION   WP_236013242
VERSION     WP_236013242.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycanilyticus
  ORGANISM  Paenibacillus glycanilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 245)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 245)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Paenibacillus glycanilyticus"
                     /db_xref="taxon:126569"
     Protein         1..245
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=27516
     Region          18..242
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(58,95,125,220,223)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(58,220,223)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(58,95,125)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
ORIGIN      
        1 mnktaaegnk lmkthtvnta vipatkleed sydwwerheq vlqirneidp eivligdsit
       61 hfwgglpvst srhgtgqawe svfggrrvln lgfgwdrtqn viwrldngqf eglspkwvvi
      121 nigtnntset dnarastaee ardgvraive rvrkhapsar ivlmavfpre espedprrkl
      181 igrmnelyae laaelgltfl digpsmlaed gnlpreiafd tchlteqgyq lwadalrevl
      241 nresk
//
LOCUS       WP_236013248             436 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Paenibacillus glycanilyticus].
ACCESSION   WP_236013248
VERSION     WP_236013248.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycanilyticus
  ORGANISM  Paenibacillus glycanilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019581.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07969.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Paenibacillus glycanilyticus"
                     /db_xref="taxon:126569"
     Protein         1..436
                     /product="amidohydrolase family protein"
                     /calculated_mol_wt=46690
     Region          1..426
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
     Site            order(60,62,213,216,245,312)
                     /site_type="active"
                     /db_xref="CDD:238618"
ORIGIN      
        1 mtipldllvs evrlpgsgel tdlgikggki tavgklagaa aknvfqargr lllppfveph
       61 vhldttltag dpvwnesgtl aegisvwasr kkqltredvl araertlelf igygvlylra
      121 mvdigdpklt alravlelkd kyrdlmhmqv iafpqdglva cpenvarlee alrlgadgvs
      181 avphlertre dgilslrkaf slaerygalv hvfcdetdde asrylevcaa laietglgsk
      241 vtaahanaaa yynepyfqkl lglvkqsgls ivacplinsv mqgrydtspk grgitriqdf
      301 hragvnvala hddirtpfyp lgtgnpldaa hmaahlahmc grrdlndiag mityggakam
      361 giagygfeqg gpkvgdpasf llfdapdsae lirtrsapry vfhqgllvae tapaitkllh
      421 aasgekayss leagvk
//
LOCUS       WP_236013425            1083 aa            linear   BCT 02-MAR-2025
DEFINITION  carbohydrate-binding protein [Paenibacillus glycanilyticus].
ACCESSION   WP_236013425
VERSION     WP_236013425.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycanilyticus
  ORGANISM  Paenibacillus glycanilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015387.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03422.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Paenibacillus glycanilyticus"
                     /db_xref="taxon:126569"
     Protein         1..1083
                     /product="carbohydrate-binding protein"
                     /GO_function="GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /calculated_mol_wt=117240
     Region          38..360
                     /region_name="COG4833"
                     /note="Predicted alpha-1,6-mannanase, GH76 family
                     [Carbohydrate transport and metabolism]"
                     /db_xref="CDD:443861"
     Region          394..526
                     /region_name="CBM6_xylanase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); many are
                     appended to glycoside hydrolase (GH) family 11 and GH43
                     xylanase domains; cd04084"
                     /db_xref="CDD:271150"
     Site            order(410,420..421,481,520)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:271150"
     Region          538..661
                     /region_name="CBM6_xylanase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); many are
                     appended to glycoside hydrolase (GH) family 11 and GH43
                     xylanase domains; cd04084"
                     /db_xref="CDD:271150"
     Site            order(554,561..562,620,655)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:271150"
     Region          674..799
                     /region_name="CBM6_xylanase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); many are
                     appended to glycoside hydrolase (GH) family 11 and GH43
                     xylanase domains; cd04084"
                     /db_xref="CDD:271150"
     Site            order(689,698..699,760,793)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:271150"
     Region          822..892
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cl21522"
                     /db_xref="CDD:473895"
ORIGIN      
        1 mtgktrrrsk livlpialal svsplipngt prahafeaad aktaieaynn afwdasakyf
       61 wktskhdgyq dfwveaelwe lvmdayqeat dpelkaklrt qiddvfdgai akygqdwtnn
      121 tfnddimwwa mastrayqit ndakylerae yyfnyvydtq wddefagggi wwksddrttk
      181 nacinfpaae aavflynatg nahyldaask iyrwgktmlt dgngkvfdri etqngpipda
      241 thynqgtfig aavglyqitg dkiylddalk gatftkerlv dangllryeg pngdlkggkt
      301 ilmrnlgylq kvvnassesk yktfadsyne wlafntdmaw snrnaanlvd snwagqqlsg
      361 tfeswssaaa vqaltslepq daehleyavk npynkieaes fnivngpgme gsiegsqqlg
      421 giqdgyyaay knvdfgsgqg asgfiarass gtgggqievr ldaldgpkvg tlnvegtggw
      481 nnfidavtll kddqgntsnv tgkhdvylvf kktndsylfn lnwfkftktd ptrtdayakl
      541 qaenfassdg lsvnasgqfa dgihnnayas ykdidfgsga agvtlhlasg nkggsievkl
      601 dsldgptagv ievpsmgnwn nwldvtsimd dslavgvhdv ylifhgadgs dypcnldwft
      661 fsqikgkard aygkleaenf tnsvnvgten ggnqtylagv ygpnnpyamy nyvdfgdagp
      721 tqfhvqaasa tsggtieari dgingpviat akvsgtggwq tfqvfdgsit aaapvtgkhl
      781 vyllfkgndw lynfdkftfg dasvftaptl ppdpvddgvp pgevenvqft rdnskltvhw
      841 dgpyaldgdv vrlkllqsgq qvgevtevkr gvqsavlsgi eadqsytlvi saadksgnvs
      901 agirveipav pvytltangs kledgavled daylsfqagd gktairsasl afdgktyngn
      961 klsielaghl gaqtvviave daagnklqkm vqiqvktstg smsklvdryk asgevgksla
     1021 sqlsaslkqa qhhldkghrd qaikqmqdfi kqlnkakssd lkaqakavln adaealiesw
     1081 kkk
//
LOCUS       WP_236013438             275 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Paenibacillus glycanilyticus].
ACCESSION   WP_236013438
VERSION     WP_236013438.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycanilyticus
  ORGANISM  Paenibacillus glycanilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 275)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Paenibacillus glycanilyticus"
                     /db_xref="taxon:126569"
     Protein         1..275
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=29874
     Region          24..272
                     /region_name="protocat_pcaD"
                     /note="3-oxoadipate enol-lactonase; TIGR02427"
                     /db_xref="CDD:131480"
ORIGIN      
        1 mtatvnetnr tnglsffttg dgvrlayrld gaagkpillm ansiatsmnm wdgqmeafke
       61 hfrvlrydyr ghgdsdtpag pystdrmgrd vvelldslqi grvhflglsl ggvvgqwlgi
      121 haperinrli lsntssylgp aeqwnglids vlqaenlngf adtfinnwfp tpmiesgsei
      181 vaafrkmvla traegiggsw aairdmdlrr taaligsptl viagqydtvt lpshgellae
      241 tvphakllml pavhlpnvef pdlfesavld fllad
//
LOCUS       WP_236013454              80 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme [Paenibacillus
            glycanilyticus].
ACCESSION   WP_236013454
VERSION     WP_236013454.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycanilyticus
  ORGANISM  Paenibacillus glycanilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Paenibacillus glycanilyticus"
                     /db_xref="taxon:126569"
     Protein         1..80
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /calculated_mol_wt=9402
     Region          <7..>65
                     /region_name="CsdA"
                     /note="Selenocysteine lyase/Cysteine desulfurase [Amino
                     acid transport and metabolism]; COG0520"
                     /db_xref="CDD:440286"
ORIGIN      
        1 mfgrlkalna vithilqqit dkryvlvsem ehisnnlpwr erfeveyiav nqdgqiqled
       61 lkdkliklrg qiglvdwrer
//
LOCUS       WP_236013451              83 aa            linear   BCT 02-MAR-2025
DEFINITION  NIPSNAP family protein [Paenibacillus glycanilyticus].
ACCESSION   WP_236013451
VERSION     WP_236013451.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycanilyticus
  ORGANISM  Paenibacillus glycanilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 83)
  AUTHORS   Seroussi,E., Pan,H.Q., Kedra,D., Roe,B.A. and Dumanski,J.P.
  TITLE     Characterization of the human NIPSNAP1 gene from 22q12: a member of
            a novel gene family
  JOURNAL   Gene 212 (1), 13-20 (1998)
   PUBMED   9661659
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019590.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07978.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Paenibacillus glycanilyticus"
                     /db_xref="taxon:126569"
     Protein         1..83
                     /product="NIPSNAP family protein"
                     /calculated_mol_wt=10291
     Region          3..>75
                     /region_name="NIPSNAP"
                     /note="cl46801"
                     /db_xref="CDD:481141"
ORIGIN      
        1 mlyelriyti yegrmdaiqd rfkehtfrif trlgmkvvnf widatgqnkl yyvmefkdma
       61 qrqrlweqfk kdvewiqvkr nse
//
LOCUS       WP_236013459             412 aa            linear   BCT 02-MAR-2025
DEFINITION  GHKL domain-containing protein [Paenibacillus glycanilyticus].
ACCESSION   WP_236013459
VERSION     WP_236013459.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycanilyticus
  ORGANISM  Paenibacillus glycanilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025854.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14501.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Paenibacillus glycanilyticus"
                     /db_xref="taxon:126569"
     Protein         1..412
                     /product="GHKL domain-containing protein"
                     /calculated_mol_wt=46420
     Region          29..156
                     /region_name="PDC1_HK_sensor"
                     /note="first PDC (PhoQ/DcuS/CitA) domain of
                     methyl-accepting chemotaxis proteins, diguanylate-cyclase
                     and similar domains; cd18773"
                     /db_xref="CDD:350341"
     Region          <146..408
                     /region_name="CitA"
                     /note="Sensor histidine kinase DipB regulating
                     citrate/malate metabolism [Signal transduction
                     mechanisms]; COG3290"
                     /db_xref="CDD:442519"
ORIGIN      
        1 msiltcsklv ltyystgnat qttlakqyit iaqdmaagld ksayerflqt kqpdpsiiqy
       61 leeyrsriha lyvytllldd tdvakvmlsa vptesellpi gspctvppkq vnqakdgley
      121 ytgiiqdkth gvylsigvpi vsesgkllgv maididasql esisqevins nkvvftidil
      181 favilllaff vlrkwhktrl kqdlyeseqm yisemgkvid sikssrhdrm nhlqvlhgll
      241 tlkkydrate ylkqlaadsr aldlsmkinn pvililfqsk welaqskgie mqfetdtdey
      301 skiesmdlvk ifsnlldnai eatevyegkl prrivvasrs kgvktvytve npailhakdq
      361 knlfhtdgyt tkanpnamrg nglsiiaktv hkyngdirfr yenetvkiqi tl
//
LOCUS       WP_236013578             869 aa            linear   BCT 02-MAR-2025
DEFINITION  putative LPS assembly protein LptD [Capnocytophaga bilenii].
ACCESSION   WP_236013578
VERSION     WP_236013578.1
KEYWORDS    RefSeq.
SOURCE      Capnocytophaga bilenii
  ORGANISM  Capnocytophaga bilenii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Capnocytophaga.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040057.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19838.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..869
                     /organism="Capnocytophaga bilenii"
                     /db_xref="taxon:2819369"
     Protein         1..869
                     /product="putative LPS assembly protein LptD"
                     /calculated_mol_wt=98824
     Region          193..661
                     /region_name="LptD_2"
                     /note="LptD protein; pfam19838"
                     /db_xref="CDD:466203"
ORIGIN      
        1 mgdtvkndsi kkqlrgrrek pvkpkkkkds vvakdtikra dgaledvvay kakdsiifdv
       61 kkqqialhnq tnvkytdidi tagvdvidyk kgevyagrlk dsvgeytqhp vfkqgkdvie
      121 pdsirfnyrn qkaiirnayt kqdennvkge vikkendsty fmhnaiitta edlddpdyyi
      181 kvrkakfvpk kkiiagfsnm yiadiptpia ipfayypmvt grtsglifpt fgevnnrgyf
      241 lqnlgyyfvi sdnfdlalsa dyytngsygl rsqsayvkry rytgnfnltf enniysmrgl
      301 pdysgsqmys iqwthskdsk snpnsnfsas vnlssnsryy qesynqvnts nflnntmmss
      361 vsysktfpas pavnisisas hsqntntkni emtlpslrgs veriypfake getkkgliks
      421 lnfqysmqad nrfstydslf fskkmfnear ngvqhsipis ttaklmkyit wginsslnet
      481 wqfrtirrrd fnattgktai dtirgfdrfm tynagtslgt tiygtfrfkk gfpiqairhv
      541 mrpsvnygyt psfdryydyy iadaygreaq ytrfeggiyg tpglseaqsi gfslantfea
      601 kmkqkdstet qpkkvmllns lnfssnynvi tkqfsplnvt ggtaifngkl ginfgatlnp
      661 yaidnngrqm ekwnidnggs lfrltnanis tnysfsnkdk qdkkgdknkr ekptgnatgg
      721 rtddlfgssr plneepnrkh kegeegegdd kkpkfyqavi pwdltlahsl tysnmaregr
      781 iannslmfsg nvsltpkwqv gvssgydfvn kgftytqlrf erdldsfrms fqftpfgyrt
      841 swyffigika smlsdlkwek nkqpdrvlr
//
LOCUS       WP_236013690             608 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Catonella massiliensis].
ACCESSION   WP_236013690
VERSION     WP_236013690.1
KEYWORDS    RefSeq.
SOURCE      Catonella massiliensis
  ORGANISM  Catonella massiliensis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Catonella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00528.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Catonella massiliensis"
                     /db_xref="taxon:2799636"
     Protein         1..608
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=65588
     Region          38..90
                     /region_name="OppC_N"
                     /note="N-terminal TM domain of oligopeptide transport
                     permease C; pfam12911"
                     /db_xref="CDD:463747"
     Region          106..374
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     Region          <377..602
                     /region_name="DppC"
                     /note="ABC-type dipeptide/oligopeptide/nickel transport
                     system, permease component [Amino acid transport and
                     metabolism, Inorganic ion transport and metabolism];
                     COG1173"
                     /db_xref="CDD:440786"
ORIGIN      
        1 msdnnkkkra sllarlfmpr ngieekdvdi fkeeqmqspg rtiiknfvsn klsmgglivf
       61 lcifafvlig plffiqdlsy eestqinlap gldmmsvpkg lqgkvsdiai gssfsagvsk
      121 tgglyvwgkt qvlptinlst fpkevrgkkf vkvaagvdhi valtdddqlv awgnprlnqt
      181 kinpdiknds gkivqiaagy qitgvlkdng naflfgntsv ndakirrkyq gslaklafts
      241 daligltkag evvylgsnds svskipeelk sggvkdiaas gftaaalked gkvvvwgnlk
      301 ngedkvpetk skivslqggr yhytavledg sviawgknnf gqanapsikn vtqvfsgyyq
      361 nyvltkdgkv ttfglkgyll gtdelgrdll nrivnggrmt mtmgavavii sviigvivgg
      421 isgffggtvd lllqrltemv ssipflpfam ilssivggkl pesarifmim vilgvlswts
      481 larlvraqvl aereqefvta aramgikelt ivfkhiipnv isviivtatl dfatcmltes
      541 slsflgfgva lprptwgnml ngainsvvik sywwrwvfps illgvccici nlvgdglrda
      601 idpksner
//
LOCUS       WP_236013712             305 aa            linear   BCT 02-MAR-2025
DEFINITION  S1 RNA-binding domain-containing protein [Catonella massiliensis].
ACCESSION   WP_236013712
VERSION     WP_236013712.1
KEYWORDS    RefSeq.
SOURCE      Catonella massiliensis
  ORGANISM  Catonella massiliensis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Catonella.
REFERENCE   1  (residues 1 to 305)
  AUTHORS   Bycroft,M., Hubbard,T.J., Proctor,M., Freund,S.M. and Murzin,A.G.
  TITLE     The solution structure of the S1 RNA binding domain: a member of an
            ancient nucleic acid-binding fold
  JOURNAL   Cell 88 (2), 235-242 (1997)
   PUBMED   9008164
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012784.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00575.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Catonella massiliensis"
                     /db_xref="taxon:2799636"
     Protein         1..305
                     /product="S1 RNA-binding domain-containing protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /calculated_mol_wt=33320
     Region          9..>267
                     /region_name="RpsA"
                     /note="Ribosomal protein S1 [Translation, ribosomal
                     structure and biogenesis]; COG0539"
                     /db_xref="CDD:440305"
ORIGIN      
        1 msdnekmesm ddyleeleks fhrlkngdmv kgpvigiget evtvdlgsya egivpidels
       61 ndprfsiktd iavgdvvnam vispdngigq vllsikradn ilawdfleea kengqvfnvk
      121 iteavkggvv tylkgirafi pasglalnyv edtesfigkh isvriievde ddkklilsak
      181 svlreeeakk teekmskiai gtvvtgkver ienygafvrl pdglsglvhi sqmserrikh
      241 pkevvsende vkvmiteikd gklslsmtra aeseatddid stpveystgd apttsfadll
      301 kgikl
//
LOCUS       WP_236013718            1297 aa            linear   BCT 02-MAR-2025
DEFINITION  Eco57I restriction-modification methylase domain-containing protein
            [Capnocytophaga bilenii].
ACCESSION   WP_236013718
VERSION     WP_236013718.1
KEYWORDS    RefSeq.
SOURCE      Capnocytophaga bilenii
  ORGANISM  Capnocytophaga bilenii
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Capnocytophaga.
REFERENCE   1  (residues 1 to 1297)
  AUTHORS   Schluckebier,G., Kozak,M., Bleimling,N., Weinhold,E. and Saenger,W.
  TITLE     Differential binding of S-adenosylmethionine S-adenosylhomocysteine
            and Sinefungin to the adenine-specific DNA methyltransferase M.TaqI
  JOURNAL   J Mol Biol 265 (1), 56-67 (1997)
   PUBMED   8995524
REFERENCE   2  (residues 1 to 1297)
  AUTHORS   Janulaitis,A., Vaisvila,R., Timinskas,A., Klimasauskas,S. and
            Butkus,V.
  TITLE     Cloning and sequence analysis of the genes coding for Eco57I type
            IV restriction-modification enzymes
  JOURNAL   Nucleic Acids Res 20 (22), 6051-6056 (1992)
   PUBMED   1334261
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019291.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07669.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Capnocytophaga bilenii"
                     /db_xref="taxon:2819369"
     Protein         1..1297
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=148839
     Region          139..699
                     /region_name="SSL2"
                     /note="Superfamily II DNA or RNA helicase [Transcription,
                     Replication, recombination, and repair]; COG1061"
                     /db_xref="CDD:440681"
     Region          979..1079
                     /region_name="Eco57I"
                     /note="Eco57I restriction-modification methylase;
                     pfam07669"
                     /db_xref="CDD:369456"
ORIGIN      
        1 matfelslkp rliyiftiad eahsdcvkig ettfngnglp eanckelnna ahnrikqytq
       61 tagisyqllh teltlfsreg kiglfndkev hsvlersgvk kkafkgatew yccdlataik
      121 aiaavkqgrk slktedistt enpiifrpeq adaiertekq fkkgaqmlwn akmrfgktlc
      181 alqvaknlqm krtlivthrp vvdagwyedf rkifydspny yygskakgen dfasleklan
      241 eggnyvyfas mqdmrgskev ggkfdknnel fsttwdfliv deahegtqte lgqsviahlr
      301 gsntkilrls gtpfnllddh keeeiftwdy vmeqkakidw eithlgdtnp yaalpaihiy
      361 tydlgrlmse ysddekafnf reffrtredg tfvhdkdidr fltllcddse sfypyandtf
      421 rkifrhtlwi lpgvkaaksl saklqnhpif gafkvvnvag dgdeeeesrd aldlvekaig
      481 kdsdqtytit lscgrlttgv sikpwtgvfm magaystsaa symqtifrvq tpythngrmk
      541 tdcyafdfap drtlrvlaes akvsakagkq teedrkilgd flnfcpiiai egsqmkpydv
      601 ktmlgqlkra qiekvvqcgf edgalyndel lkltevelkd fsnlratigk tkamprpgdi
      661 dinkqglnne lhaekerlek kkkkdlttee aerleqlkal gdqrreaiai lrgisirmpl
      721 llygaeitne deeltldnfe klvddtswee fmprgvtkev frrfkryyds difreagkri
      781 remarmadkf tieerisria aifatfrnpd ketvltpwrv vnrhlsdclg gycfmdknfe
      841 qpldvpryvt qegvteevft pknvileins ksglyplyaa yniyrsriee akkkyreevg
      901 rqlalqlwda tleenilvvc ktpmarsitk rtlagfrett vraeyypeli eniskqpesv
      961 vnmlhdgkrf whfndkeymk idtiignppy qvmdggaqas akpiyqlfiq qamklnpkyi
     1021 smitpsrwfa ggkglddfrk amlkdkrika ihdypnasei fpsieikggv nyflwdkeyk
     1081 gdclirtyen gvcvsalkrp lkennadvfi ryneaipilr kiqsfneksf selmssakpf
     1141 glrtyfkges epfegaikiy vnggvgyikk eevlknqhwi kehkvivpya igsgdsktdk
     1201 vnpiyaepns cctetylvig pfatkkqcen vmqyigtkfl hfcltlkknt qhstkefyqf
     1261 vpqqnfdeew tdeklykkyg ltpeeivyie kmirpme
//
LOCUS       WP_236013768             108 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4143 domain-containing protein [Catonella massiliensis].
ACCESSION   WP_236013768
VERSION     WP_236013768.1
KEYWORDS    RefSeq.
SOURCE      Catonella massiliensis
  ORGANISM  Catonella massiliensis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Catonella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025019.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13635.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Catonella massiliensis"
                     /db_xref="taxon:2799636"
     Protein         1..108
                     /product="DUF4143 domain-containing protein"
                     /calculated_mol_wt=12192
     Region          <1..105
                     /region_name="COG1373"
                     /note="Predicted ATPase, AAA+ superfamily [General
                     function prediction only]"
                     /db_xref="CDD:440984"
ORIGIN      
        1 mfetfvvsei lksysnegrd yrfnifyyrg kdknaseene idliieengi lypvevkmsg
       61 npkasmgaan pvldkipdkk rgvgvilcli drktylrgnl ialpieyi
//
LOCUS       WP_236013778             459 aa            linear   BCT 02-MAR-2025
DEFINITION  AlwI family type II restriction endonuclease [Catonella
            massiliensis].
ACCESSION   WP_236013778
VERSION     WP_236013778.1
KEYWORDS    RefSeq.
SOURCE      Catonella massiliensis
  ORGANISM  Catonella massiliensis
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Catonella.
REFERENCE   1  (residues 1 to 459)
  AUTHORS   Steczkiewicz,K., Muszewska,A., Knizewski,L., Rychlewski,L. and
            Ginalski,K.
  TITLE     Sequence, structure and functional diversity of PD-(D/E)XK
            phosphodiesterase superfamily
  JOURNAL   Nucleic Acids Res 40 (15), 7016-7045 (2012)
   PUBMED   22638584
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021040.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09491.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Catonella massiliensis"
                     /db_xref="taxon:2799636"
     Protein         1..459
                     /product="AlwI family type II restriction endonuclease"
                     /EC_number="3.1.21.-"
                     /calculated_mol_wt=53207
     Region          <105..415
                     /region_name="RE_AlwI"
                     /note="AlwI restriction endonuclease; pfam09491"
                     /db_xref="CDD:401443"
ORIGIN      
        1 mekdnykqal nllkteqise elicnvginr ksamydkpyy klytilkkiv fskdnlalel
       61 yeatkkltns kvggawrkhf fnsnarsvia reglsvlntv pifhatsekt fneeffkimh
      121 ifkakatlsd yfdlnrryfk itdivlfedn kvkldvlpkc yidmisdhll diafcktkll
      181 sknvplkdig tffeididdl yeklgqalgt svsnkkmakk vikneryarf nkliddkfdk
      241 etlirlfsaf esrnddeirn lvtdnadipt ifeyvlgisw yivserkgdv leymnlslea
      301 dllpkthagg geadivwkyd ktdaypkhtl lieatladgs nqrrmemepv srhlgdycla
      361 hpkdeaycvf ittylnnnvi sdfrarkyme yynnageyik gmkilpietk elktllkfdv
      421 kypqiykmfd vayhsdgapk ewyeknivke agiyngenv
//
LOCUS       WP_236013988              50 aa            linear   BCT 02-MAR-2025
DEFINITION  entericidin A/B family lipoprotein [Marinobacterium
            alkalitolerans].
ACCESSION   WP_236013988
VERSION     WP_236013988.1
KEYWORDS    RefSeq.
SOURCE      Marinobacterium alkalitolerans
  ORGANISM  Marinobacterium alkalitolerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Marinobacterium.
REFERENCE   1  (residues 1 to 50)
  AUTHORS   Bishop,R.E., Leskiw,B.K., Hodges,R.S., Kay,C.M. and Weiner,J.H.
  TITLE     The entericidin locus of Escherichia coli and its implications for
            programmed bacterial cell death
  JOURNAL   J Mol Biol 280 (4), 583-596 (1998)
   PUBMED   9677290
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08085.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..50
                     /organism="Marinobacterium alkalitolerans"
                     /db_xref="taxon:1542925"
     Protein         1..50
                     /product="entericidin A/B family lipoprotein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009636 - response to toxic substance
                     [Evidence IEA]"
                     /calculated_mol_wt=5023
     Region          3..49
                     /region_name="COG5510"
                     /note="Predicted small secreted protein [Function
                     unknown]"
                     /db_xref="CDD:444261"
ORIGIN      
        1 mqkklfslma slglllafgl qagcstiega gkdlskagea ireaaqdaqn
//
LOCUS       WP_236013414             261 aa            linear   BCT 02-MAR-2025
DEFINITION  aminoglycoside adenylyltransferase domain-containing protein
            [Paenibacillus glycanilyticus].
ACCESSION   WP_236013414
VERSION     WP_236013414.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus glycanilyticus
  ORGANISM  Paenibacillus glycanilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 261)
  AUTHORS   Stern,A.L., Van der Verren,S.E., Kanchugal,P. S, Nasvall,J.,
            Gutierrez-de-Teran,H. and Selmer,M.
  TITLE     Structural mechanism of AadA, a dual-specificity aminoglycoside
            adenylyltransferase from Salmonella enterica
  JOURNAL   J Biol Chem 293 (29), 11481-11490 (2018)
   PUBMED   29871922
REFERENCE   2  (residues 1 to 261)
  AUTHORS   Chen,Y., Nasvall,J., Wu,S., Andersson,D.I. and Selmer,M.
  TITLE     Structure of AadA from Salmonella enterica: a monomeric
            aminoglycoside (3'')(9) adenyltransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 71 (Pt 11), 2267-2277 (2015)
   PUBMED   26527143
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024819.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13427.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Paenibacillus glycanilyticus"
                     /db_xref="taxon:126569"
     Protein         1..261
                     /product="aminoglycoside adenylyltransferase
                     domain-containing protein"
                     /calculated_mol_wt=29415
     Region          6..255
                     /region_name="PRK13746"
                     /note="aminoglycoside resistance protein; Provisional"
                     /db_xref="CDD:184296"
     Region          151..251
                     /region_name="DUF4111"
                     /note="Domain of unknown function (DUF4111); pfam13427"
                     /db_xref="CDD:433197"
ORIGIN      
        1 mkgdmadida flekavsifr silsdnltgi ylhgslamgc fnpqksdidl ilvvknklsk
       61 eelqlmtrhi llldhdltgs ngielsiile syakefsypt pfeyhysesh reryqsepgy
      121 lcggfedpdl aahltviyyr grtlwgvpip elfkpvesih yiqsilgdis easkgiidlp
      181 vyyslnlcrv llylregevs skqeggewgl rvlpskhhai lraclddymg qgnlserder
      241 pfiefaeymq aeikkatkgs g
//
LOCUS       WP_236014068             209 aa            linear   BCT 02-MAR-2025
DEFINITION  CBS domain-containing protein [Marinobacterium alkalitolerans].
ACCESSION   WP_236014068
VERSION     WP_236014068.1
KEYWORDS    RefSeq.
SOURCE      Marinobacterium alkalitolerans
  ORGANISM  Marinobacterium alkalitolerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Marinobacterium.
REFERENCE   1  (residues 1 to 209)
  AUTHORS   Scott,J.W., Hawley,S.A., Green,K.A., Anis,M., Stewart,G.,
            Scullion,G.A., Norman,D.G. and Hardie,D.G.
  TITLE     CBS domains form energy-sensing modules whose binding of adenosine
            ligands is disrupted by disease mutations
  JOURNAL   J Clin Invest 113 (2), 274-284 (2004)
   PUBMED   14722619
REFERENCE   2  (residues 1 to 209)
  AUTHORS   Kemp,B.E.
  TITLE     Bateman domains and adenosine derivatives form a binding contract
  JOURNAL   J Clin Invest 113 (2), 182-184 (2004)
   PUBMED   14722609
REFERENCE   3  (residues 1 to 209)
  AUTHORS   Janosik,M., Kery,V., Gaustadnes,M., Maclean,K.N. and Kraus,J.P.
  TITLE     Regulation of human cystathionine beta-synthase by
            S-adenosyl-L-methionine: evidence for two catalytically active
            conformations involving an autoinhibitory domain in the C-terminal
            region
  JOURNAL   Biochemistry 40 (35), 10625-10633 (2001)
   PUBMED   11524006
REFERENCE   4  (residues 1 to 209)
  AUTHORS   Zhang,R., Evans,G., Rotella,F.J., Westbrook,E.M., Beno,D.,
            Huberman,E., Joachimiak,A. and Collart,F.R.
  TITLE     Characteristics and crystal structure of bacterial
            inosine-5'-monophosphate dehydrogenase
  JOURNAL   Biochemistry 38 (15), 4691-4700 (1999)
   PUBMED   10200156
REFERENCE   5  (residues 1 to 209)
  AUTHORS   Ponting,C.P.
  TITLE     CBS domains in CIC chloride channels implicated in myotonia and
            nephrolithiasis (kidney stones)
  JOURNAL   J Mol Med (Berl) 75 (3), 160-163 (1997)
   PUBMED   9106071
REFERENCE   6  (residues 1 to 209)
  AUTHORS   Bateman,A.
  TITLE     The structure of a domain common to archaebacteria and the
            homocystinuria disease protein
  JOURNAL   Trends Biochem Sci 22 (1), 12-13 (1997)
   PUBMED   9020585
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012780.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00571.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Marinobacterium alkalitolerans"
                     /db_xref="taxon:1542925"
     Protein         1..209
                     /product="CBS domain-containing protein"
                     /calculated_mol_wt=23100
     Region          52..181
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
     Site            order(55,57..59,81..83,158,172,174,176..177,180)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:341358"
     Region          55..125
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
     Site            order(81,93,98..99,102,132,158..160,176)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:341358"
     Region          132..180
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
ORIGIN      
        1 mnasrrwrve ieimqryhel ktvslehyqt lsgaesssai dldspaesvm tdfrkvvplt
       61 mslnesvdea tramrkvhvr svivtdssah frgiltvidl esrkvlsqat slglkredls
      121 ikdvmvprak lrgvplsvlq qgtigdllkt lqyegsqhml vvnpateeic giisaseiar
      181 qlqvpveinl qatsfrelve tvfgrgeva
//
LOCUS       WP_236014740             441 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Microbacterium stercoris].
ACCESSION   WP_236014740
VERSION     WP_236014740.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium stercoris
  ORGANISM  Microbacterium stercoris
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Microbacterium stercoris"
                     /db_xref="taxon:2820289"
     Protein         1..441
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45121
     Region          31..431
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(31,34..35,38,70,120..121,123..125,128,148,151..152,
                     155,261,264..265,268..270,273,300,304,357..358,362,366,
                     382,385..386,389..390,393)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340883"
ORIGIN      
        1 mtqigsgegg gaaetirrya pmvygptaiy slgqgailpl lpivardfga dlataalvaa
       61 mlvvgqlcgn lpagwlvarl gerytmvvas gvsllgvagm llsrhlgvlm vsvfvmglsa
      121 aafglarhsf mttrvpvafr aralsllggs frlgafvgpf iaaallwifg dehssiwffg
      181 aslvvvallv afgpdpeera iaaeraarae rarnaaeqae afepedtgea vtgsiptqar
      241 mgilgtiran rgvlsrlgla aaslsfvras rpailplwgl sigldsstia livgiagale
      301 falfyasgqv mdrfgrlwaa vpalvlmgga mialafthea geaamwfgvf asvigvgngl
      361 ssgilltlga dvapkhspaa flgawrtitd aggalsplvv sgltavasls iaagaigvvg
      421 llgalafvrw vpryvprrps t
//
LOCUS       WP_236014941             125 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Geomonas anaerohicana].
ACCESSION   WP_236014941
VERSION     WP_236014941.1
KEYWORDS    RefSeq.
SOURCE      Geomonas anaerohicana
  ORGANISM  Geomonas anaerohicana
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
REFERENCE   1  (residues 1 to 125)
  AUTHORS   Yuan,H.S., Finkel,S.E., Feng,J.A., Kaczor-Grzeskowiak,M.,
            Johnson,R.C. and Dickerson,R.E.
  TITLE     The molecular structure of wild-type and a mutant Fis protein:
            relationship between mutational changes and recombinational
            enhancer function or DNA binding
  JOURNAL   Proc Natl Acad Sci U S A 88 (21), 9558-9562 (1991)
   PUBMED   1946369
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02954.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Geomonas anaerohicana"
                     /db_xref="taxon:2798583"
     Protein         1..125
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /calculated_mol_wt=13114
     Region          <66..118
                     /region_name="PEP_resp_reg"
                     /note="PEP-CTERM-box response regulator transcription
                     factor; TIGR02915"
                     /db_xref="CDD:274348"
ORIGIN      
        1 mkkrqvakda acrppsgdgn eahpagwmga qcvvlqrlfs grndlalsgg qlapggetac
       61 gmagvasgqm tlreardrve rymvhdaiea sggnmskaae vlgvsrpaly dlakkyglcr
      121 ikpre
//
LOCUS       WP_236014957             433 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Geomonas anaerohicana].
ACCESSION   WP_236014957
VERSION     WP_236014957.1
KEYWORDS    RefSeq.
SOURCE      Geomonas anaerohicana
  ORGANISM  Geomonas anaerohicana
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Geomonas anaerohicana"
                     /db_xref="taxon:2798583"
     Protein         1..433
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44713
     Region          53..432
                     /region_name="nepI"
                     /note="purine ribonucleoside efflux pump NepI; PRK10213"
                     /db_xref="CDD:182309"
ORIGIN      
        1 msailddevt fancvestav ladnrmdaaf sasegfivea aatpaavqra vsarqtwsav
       61 gsmalcvaml iasefmpvsl ltpiaadlga tagaagqais isgffavvts lliaivagrf
      121 drrhvlmglt glmlaslilm aeaatfgtlm aarallgivv ggfwalatai imrlvpeesv
      181 pqalgaiytg nalattfaap igsylggivg wrgvfwalvp lvvinliwqw islpsmppqt
      241 ahpvgkilgl lkrrtvifam vgvmltfaga fttftymrrf letytrvsvp qlsllllglg
      301 gagfagtyga sallgrhlya llrllpigla avtlgllavg hmlwqvavmm iawgtlnsai
      361 pvawstwltk gisdepesgg glmvaaiqls illgaafggl lldhlsiaat figgtillgl
      421 aavvigsgnr ikg
//
LOCUS       WP_236015032             800 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase family 95 catalytic domain-containing protein
            [Microbacterium stercoris].
ACCESSION   WP_236015032
VERSION     WP_236015032.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium stercoris
  ORGANISM  Microbacterium stercoris
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 800)
  AUTHORS   Anso,I., Naegeli,A., Cifuente,J.O., Orrantia,A., Andersson,E.,
            Zenarruzabeitia,O., Moraleda-Montoya,A., Garcia-Alija,M.,
            Corzana,F., Del Orbe,R.A., Borrego,F., Trastoy,B., Sjogren,J. and
            Guerin,M.E.
  TITLE     Turning universal O into rare Bombay type blood
  JOURNAL   Nat Commun 14 (1), 1765 (2023)
   PUBMED   36997505
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 800)
  AUTHORS   Nakamura,S., Nihira,T., Kurata,R., Nakai,H., Funane,K., Park,E.Y.
            and Miyazaki,T.
  TITLE     Structure of a bacterial alpha-1,2-glucosidase defines mechanisms
            of hydrolysis and substrate specificity in GH65 family hydrolases
  JOURNAL   J Biol Chem 297 (6), 101366 (2021)
   PUBMED   34728215
REFERENCE   3  (residues 1 to 800)
  AUTHORS   Rogowski,A., Briggs,J.A., Mortimer,J.C., Tryfona,T., Terrapon,N.,
            Lowe,E.C., Basle,A., Morland,C., Day,A.M., Zheng,H., Rogers,T.E.,
            Thompson,P., Hawkins,A.R., Yadav,M.P., Henrissat,B., Martens,E.C.,
            Dupree,P., Gilbert,H.J. and Bolam,D.N.
  TITLE     Glycan complexity dictates microbial resource allocation in the
            large intestine
  JOURNAL   Nat Commun 6, 7481 (2015)
   PUBMED   26112186
  REMARK    Erratum:[Nat Commun. 2016 Feb 05;7:10705. doi:
            10.1038/ncomms10705.. PMID: 26848059]
            Publication Status: Online-Only
REFERENCE   4  (residues 1 to 800)
  AUTHORS   Okada,S., Yamamoto,T., Watanabe,H., Nishimoto,T., Chaen,H.,
            Fukuda,S., Wakagi,T. and Fushinobu,S.
  TITLE     Structural and mutational analysis of substrate recognition in
            kojibiose phosphorylase
  JOURNAL   FEBS J 281 (3), 778-786 (2014)
   PUBMED   24255995
REFERENCE   5  (residues 1 to 800)
  AUTHORS   Nagae,M., Tsuchiya,A., Katayama,T., Yamamoto,K., Wakatsuki,S. and
            Kato,R.
  TITLE     Structural basis of the catalytic reaction mechanism of novel
            1,2-alpha-L-fucosidase from Bifidobacterium bifidum
  JOURNAL   J Biol Chem 282 (25), 18497-18509 (2007)
   PUBMED   17459873
REFERENCE   6  (residues 1 to 800)
  AUTHORS   Egloff,M.P., Uppenberg,J., Haalck,L. and van Tilbeurgh,H.
  TITLE     Crystal structure of maltose phosphorylase from Lactobacillus
            brevis: unexpected evolutionary relationship with glucoamylases
  JOURNAL   Structure 9 (8), 689-697 (2001)
   PUBMED   11587643
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046196.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22124.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Microbacterium stercoris"
                     /db_xref="taxon:2820289"
     Protein         1..800
                     /product="glycosyl hydrolase family 95 catalytic
                     domain-containing protein"
                     /calculated_mol_wt=84719
     Region          12..267
                     /region_name="Glyco_hyd_65N_2"
                     /note="Glycosyl hydrolase family 65, N-terminal domain;
                     pfam14498"
                     /db_xref="CDD:405224"
ORIGIN      
        1 mnsanpaapl rlrwntpanh wteatpigng aiggmvfgda dgriglndas lwsgtpdgpa
       61 ralaavlaeg agperlaqvr aavsseddet verllrtfeg pwsqeflplg dlelslgapd
      121 aqgyervldl ahatvverft isgtalrrts wasavdgvlv vdvqadapvs ararlrsplr
      181 iaeatatada eggelalive tpvdgapahe pdatahvwre aadgfdpaga aavvirtdga
      241 vvardgvlei egarritaml atetnhrraw nrvplvtrae lldtareral aaarkgaaav
      301 raaheaesrr llgasalhlg pawaeprdva pllddgddaa iaevlyafgr yvlvsssrag
      361 sppanlqgiw nasmrppwss nytinintqm nywlaertgl gelhtplldl iervaergae
      421 vasalygarg wvahhntdpw gyalpvgggh gatswafwpm gglwladhlw qrweygrdlg
      481 elrerilpll lgasafvldw mqdeggalgt spstspensf rrgdgstgsv stssgmdlal
      541 cratlertle aaeaagaddp llaeiraalp rvpapriiap ggvgpageia ewgadvaatd
      601 phhrhlshli alhplhaidi drtpqlaeaa rrtldarggg amgwswawki amrarlgdae
      661 tarsllreai rpyrddpdvd lptdgsewgg llpnlfsthp pfqldgnfgf taalagmlvs
      721 agrgtpddpi rllpalpeaw phgrisgvrt ragvavdlaw sngrptevtv vatttsaper
      781 vtvsfrgers eiavapggda
//
LOCUS       WP_236015193             197 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Geomonas anaerohicana].
ACCESSION   WP_236015193
VERSION     WP_236015193.1
KEYWORDS    RefSeq.
SOURCE      Geomonas anaerohicana
  ORGANISM  Geomonas anaerohicana
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
REFERENCE   1  (residues 1 to 197)
  AUTHORS   Ronning,D.R., Guynet,C., Ton-Hoang,B., Perez,Z.N., Ghirlando,R.,
            Chandler,M. and Dyda,F.
  TITLE     Active site sharing and subterminal hairpin recognition in a new
            class of DNA transposases
  JOURNAL   Mol Cell 20 (1), 143-154 (2005)
   PUBMED   16209952
REFERENCE   2  (residues 1 to 197)
  AUTHORS   Brynestad,S., Synstad,B. and Granum,P.E.
  TITLE     The Clostridium perfringens enterotoxin gene is on a transposable
            element in type A human food poisoning strains
  JOURNAL   Microbiology (Reading) 143 (Pt 7), 2109-2115 (1997)
   PUBMED   9245800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013921.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01797.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Geomonas anaerohicana"
                     /db_xref="taxon:2798583"
     Protein         1..197
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=22542
     Region          3..113
                     /region_name="RAYT"
                     /note="REP element-mobilizing transposase RayT [Mobilome:
                     prophages, transposons]; COG1943"
                     /db_xref="CDD:441546"
ORIGIN      
        1 mgifdsdddr caylqflkkh tddsgveila wclmtnhvhf ivvpetelsl arafgeahrs
       61 ytrmknfred vrgylfqgrf gscvldelhl iaaaryvnln pvrakmvnaa wdyewssarf
      121 hvgvrgsdpl vkdrtlkglv nnwreilteg nedvdkqlre rfrtgrplgn ddfllkveri
      181 tgrdlskkkp grpskgt
//
LOCUS       WP_236015300              84 aa            linear   BCT 02-MAR-2025
DEFINITION  YtxH domain-containing protein [Geomonas anaerohicana].
ACCESSION   WP_236015300
VERSION     WP_236015300.1
KEYWORDS    RefSeq.
SOURCE      Geomonas anaerohicana
  ORGANISM  Geomonas anaerohicana
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024143.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12732.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Geomonas anaerohicana"
                     /db_xref="taxon:2798583"
     Protein         1..84
                     /product="YtxH domain-containing protein"
                     /calculated_mol_wt=9118
ORIGIN      
        1 maermkrqmt glmmlvgggv lgaglgllfa pcageksrkk mmrmgksisn ksdrmmrdls
       61 drmdeladsm tsmsgkagkf mhlr
//
LOCUS       WP_236015303            2266 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Geomonas anaerohicana].
ACCESSION   WP_236015303
VERSION     WP_236015303.1
KEYWORDS    RefSeq.
SOURCE      Geomonas anaerohicana
  ORGANISM  Geomonas anaerohicana
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024603.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13205.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2266
                     /organism="Geomonas anaerohicana"
                     /db_xref="taxon:2798583"
     Protein         1..2266
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=230607
     Region          57..1450
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          <1815..1875
                     /region_name="Cytochrom_C3"
                     /note="Heme-binding domain of the class III cytochrome C
                     family and related proteins; cl23752"
                     /db_xref="CDD:474044"
ORIGIN      
        1 mtssraenra ttfrslsntl lalllfglfv llalprpeal aqptrnstcl tgnchvatst
       61 taslawgiiy kgikypsspt tltveagtsf evewiatgmt yaasntgmsf vvglpsvtpt
      121 awsissgtat nagitgwntv wdsvggwnwr tgtvldtsat wpsspigyni dysgsplwga
      181 ssgaayddgs tttpgdkdgv adkmgtdvvi nvpattpagt ytiyvagvgh yyttkstkan
      241 ksqaititvt apnsdstkpv vsagfaattp sasktitvsg faatdntgvt gymittstta
      301 plstdagwla tapasytvaa dgsytlypwa kdaagnvsav ygapvavvvd stkpvvsagf
      361 aattpslsrt iavsgfaatd argvtgymit tsataplatd agwnatapas yavatdgsft
      421 lypwakdaag nvsavygspv tvlvdtvrpa vtssvpntga tgitpdstvt lnfsenvnca
      481 tvttssvtis pvvtwartsc sgsqavftpt gqtgsttytv tagtgvtdsa gnamassypf
      541 syttaapivr pdtaisapaa aavltgspva itgsatagtn aigsvqvstn ngstwsaatg
      601 taswsyswtl psedyvshtv lakavdsaan edttpasvtv ivdtvapagl ansapanlat
      661 nqalttslss gvatdanvsg avqyffelat dsgfttgvqq sgwqttrtfa ptlaggttyy
      721 whvrakdaag ntgaytttws fttiaptapn apsasqyqad gstaiaqagt atstsvviks
      781 tvtdvngdnv tlqvemitna ntfsgtancs svavasgsta satcsgltdg laykwrartt
      841 dgtlssswvd fgasnpdftv tvpnttpaap talaqyqadg ttaiatggta ssnvvvigat
      901 vdggnsdpvl levdlnndgi adcaspyvtg patakatcng ladgsydwrv rakdskavas
      961 awtaftgtpd ftvatgldfg vdttppadgi asassgdgyi siswtqatda gagldpvnsy
     1021 klvksnvssp adcsaaalyt gngtsyfdta vvngttyyyr vcavdevgnl sagvtvsgsp
     1081 stialpdtti stpvanavit tgpvsitgta saganplasv qvstnngttw aaatgttaws
     1141 ftwapstedy vahtilakgv dslgyadatp aqvtvrvdnv apaglnnsap anlatavaln
     1201 asltstaatd gntsaavqyf feiatnsgft tgvqqstwqt gttftptlap gtqyfwhvka
     1261 kdaagnstay tttwsfttgv vapetvlsap tagtvfstsp atisgtasag tnplgsvqvs
     1321 vnngtswnta tgtgswsysw tlpaedyvah tilaravdna anadptpasv avyvdtvapt
     1381 gfanstpanl atsvaattsl tttaatdani tasvqyffei atnsgfttgv qqstwqtgls
     1441 faptlaygtt yywhvrtrda agnistystt tsfttaaavt tvgqgtgeis ltippgatem
     1501 dldtftlatq agtdtvtgit vtlangtwag iatlnvtddt gttiygsanp asntvaitlt
     1561 tpitvtttpt qyvlvidakt atsmpappga tyavtgtvta itcsnpkayn dtasatvtid
     1621 nlspanvtaa ggaagiasns lywtnpadsd fagivvlrka gsavtdtpve ggnyltgnii
     1681 gsstvayags lnnfidaplt ngtvyyykif aldsrgnysa tgvavgpytp vrtawanspm
     1741 lhtstttgst kwsanggwge pgkkyggfsc stchnmstan imriatsvat gdgsnwatnn
     1801 sptiavsyln patdkgndst hatsnricev chsatnfhky nnaaanhngt vnctqchshn
     1861 agfkgsggsc llchnsprgv rqqvvgatlg ttgddfvrps rhiknttvkn vdciichaeg
     1921 dttstetsvk qvslhgtsga pillrnvdsq anpgtagtny wswpgrragg ttitsadrdn
     1981 mdrfcvnchd sdgastitvd tagtaittgt alarkltpfn pldggsplnv ksqfnsgnav
     2041 gsayashhnl niytkrytat yastyasrgg wtgtskdgaa mtwdtglhcs dchlnesnah
     2101 garnatrmlq dkngadaaas ntndgtatfv cyrchlstvy nysnvtvtgk ariehssfdn
     2161 vpwgpgtynd hgivclnchm gggvnniggi hgnnrsittl tqgatksyrf iyggqlglni
     2221 seanwattta pscytasstw ggacnkhdss agtgrigtpn yarplq
//
LOCUS       WP_236015547             530 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Planococcus soli].
ACCESSION   WP_236015547
VERSION     WP_236015547.1
KEYWORDS    RefSeq.
SOURCE      Planococcus soli
  ORGANISM  Planococcus soli
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 530)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 530)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 530)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 530)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Planococcus soli"
                     /db_xref="taxon:2666072"
     Protein         1..530
                     /product="ATP-binding protein"
                     /calculated_mol_wt=58466
     Region          1..523
                     /region_name="PRK11086"
                     /note="sensory histidine kinase DcuS; Provisional"
                     /db_xref="CDD:236839"
ORIGIN      
        1 mslqrrifly galfvafimi saglsfyfti seaieeqmgk ralniavtta drpdivqgfa
       61 vddphaslqp iadevqnqtg aeyvvignae girythpled rigqkmvgdd nerailkges
      121 yiseavgslg palrgkapiv deqnniigvi svgflktdmt siflqyadsi ivivliaiai
      181 ggiasmilsk sikktlfgle paeiaslfie rntliesvre giimvnksge itmanasaye
      241 vlslpkeksl igklidevlp ntllpqvllt geqqfdrpmt irgkktivnr ipividneia
      301 gavssfrlqs dldglrnelt qirqyadllr sqthehhnfl ytisgliqln sldeamelih
      361 detkeqqslv qlianrlqdp llggiviglf nrarelkvkf lldedsylek lpsylekslf
      421 vsilgnlvtn afeaveylpe herlvrllfv dngheiliev edtgkgldps ilptlfkeri
      481 stkngddrgy glvkvqenvh dlqgeitmen gdfggalfii siptggneyd
//
LOCUS       WP_236015149             491 aa            linear   BCT 02-MAR-2025
DEFINITION  C13 family peptidase [Geomonas anaerohicana].
ACCESSION   WP_236015149
VERSION     WP_236015149.1
KEYWORDS    RefSeq.
SOURCE      Geomonas anaerohicana
  ORGANISM  Geomonas anaerohicana
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
REFERENCE   1  (residues 1 to 491)
  AUTHORS   Caffrey,C.R., McKerrow,J.H., Salter,J.P. and Sajid,M.
  TITLE     Blood 'n' guts: an update on schistosome digestive peptidases
  JOURNAL   Trends Parasitol 20 (5), 241-248 (2004)
   PUBMED   15105025
REFERENCE   2  (residues 1 to 491)
  AUTHORS   Caffrey,C.R., Mathieu,M.A., Gaffney,A.M., Salter,J.P., Sajid,M.,
            Lucas,K.D., Franklin,C., Bogyo,M. and McKerrow,J.H.
  TITLE     Identification of a cDNA encoding an active asparaginyl
            endopeptidase of Schistosoma mansoni and its expression in Pichia
            pastoris
  JOURNAL   FEBS Lett 466 (2-3), 244-248 (2000)
   PUBMED   10682836
REFERENCE   3  (residues 1 to 491)
  AUTHORS   Chen,J.M., Dando,P.M., Rawlings,N.D., Brown,M.A., Young,N.E.,
            Stevens,R.A., Hewitt,E., Watts,C. and Barrett,A.J.
  TITLE     Cloning, isolation, and characterization of mammalian legumain, an
            asparaginyl endopeptidase
  JOURNAL   J Biol Chem 272 (12), 8090-8098 (1997)
   PUBMED   9065484
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013788.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01650.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Geomonas anaerohicana"
                     /db_xref="taxon:2798583"
     Protein         1..491
                     /product="C13 family peptidase"
                     /GO_function="GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=54541
     Region          264..472
                     /region_name="CASc"
                     /note="Caspase, interleukin-1 beta converting enzyme (ICE)
                     homologues; Cysteine-dependent aspartate-directed
                     proteases that mediate programmed cell death (apoptosis).
                     Caspases are synthesized as inactive zymogens and
                     activated by proteolysis of the peptide...; cl00042"
                     /db_xref="CDD:444667"
ORIGIN      
        1 mtpksptkap aetapdtaca qpcsaqdgvp vepvtlkstl srlgadlygg lrgacflrsg
       61 ferldctpls llllvvadlv lnllvslllv grggsfslss lpyflfylpl fllfavaary
      121 lvhrplaisg iaatlvafsi pievchgile wlaqwrsfew fsdylaaphy yrffgwwiaa
      181 slvfllrldg prglgrrlrl allflvlvav plyyyqradl wvskeggnes gelsltdevl
      241 taqnrlldeq laalqpgrrg hsdlyfvgfa gdasqdvflk elsvtrqlfd trfgtegrsv
      301 llvnnpqsat alpfatvgnl eralvrvgev mnrdedvlff ylsshgsrdq elevsnpple
      361 lkqvtpellr rllrkagiry kvvvvsacfs ggfiqplqdh dsllitaada thesfgcgfg
      421 enytwfgeaf vgdalrstys fteafeksrd tirkwetekd etpsnpqiwa gkdiwpilkr
      481 lqkeleqrgg k
//
LOCUS       WP_236015106             177 aa            linear   BCT 02-MAR-2025
DEFINITION  bifunctional nuclease domain-containing protein [Geomonas
            anaerohicana].
ACCESSION   WP_236015106
VERSION     WP_236015106.1
KEYWORDS    RefSeq.
SOURCE      Geomonas anaerohicana
  ORGANISM  Geomonas anaerohicana
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
REFERENCE   1  (residues 1 to 177)
  AUTHORS   Zacharia,V.M., Manzanillo,P.S., Nair,V.R., Marciano,D.K.,
            Kinch,L.N., Grishin,N.V., Cox,J.S. and Shiloh,M.U.
  TITLE     cor, a novel carbon monoxide resistance gene, is essential for
            Mycobacterium tuberculosis pathogenesis
  JOURNAL   mBio 4 (6), e00721-e00713 (2013)
   PUBMED   24255121
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 177)
  AUTHORS   You,M.K., Shin,H.Y., Kim,Y.J., Ok,S.H., Cho,S.K., Jeung,J.U.,
            Yoo,S.D., Kim,J.K. and Shin,J.S.
  TITLE     Novel bifunctional nucleases, OmBBD and AtBBD1, are involved in
            abscisic acid-mediated callose deposition in Arabidopsis
  JOURNAL   Plant Physiol 152 (2), 1015-1029 (2010)
   PUBMED   20018603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014618.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02577.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Geomonas anaerohicana"
                     /db_xref="taxon:2798583"
     Protein         1..177
                     /product="bifunctional nuclease domain-containing protein"
                     /GO_function="GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /calculated_mol_wt=19762
     Region          31..142
                     /region_name="BFN_dom"
                     /note="Bifunctional nuclease domain; cl00553"
                     /db_xref="CDD:469818"
ORIGIN      
        1 msdnerdeap myvemkvfgf aldaiaqmpv iilkdaeekh avpvwihase svsfaaqfvg
       61 remsarnsrk dvftalieql emtvagiyve slndgvftas vrlkpahgee lrlevhvaea
      121 mlmslkyhlp vqvndevltr assldmneeg faqennarrf vdfldhmdpa amgkypm
//
LOCUS       WP_236015655             276 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase [Planococcus soli].
ACCESSION   WP_236015655
VERSION     WP_236015655.1
KEYWORDS    RefSeq.
SOURCE      Planococcus soli
  ORGANISM  Planococcus soli
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 276)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 276)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Planococcus soli"
                     /db_xref="taxon:2666072"
     Protein         1..276
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=30866
     Region          1..276
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     Site            order(48,53,88,129)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381296"
ORIGIN      
        1 mefknlggtg lkisnislgt mafgrwidek asheimdval eqginlidta nfygkgqdea
       61 fkygtgecee ivgrylkgkr ntvllatkvg lpmgegqndk glsrhhimqq aeeslrrlqt
      121 dwidlyqvhr fddstpleet lsaltdlvrq gkvryigcsn yaawqmakar gisdlkgleh
      181 fassqsqynl lsrelerevm pycasekmgl lvyspmargm lsgkykskgd mpkdsraakg
      241 eeliqryftd anfrkveayk gllgdqgyel sqfala
//
LOCUS       WP_236015902              45 aa            linear   BCT 02-MAR-2025
DEFINITION  HupE/UreJ family protein, partial [Phaeovulum veldkampii].
ACCESSION   WP_236015902
VERSION     WP_236015902.1
KEYWORDS    RefSeq.
SOURCE      Phaeovulum veldkampii
  ORGANISM  Phaeovulum veldkampii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Phaeovulum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016819.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04955.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..45
                     /organism="Phaeovulum veldkampii"
                     /db_xref="taxon:33049"
     Protein         1..>45
                     /product="HupE/UreJ family protein"
     Region          1..>44
                     /region_name="HupE_UreJ_2"
                     /note="HupE / UreJ protein; cl01011"
                     /db_xref="CDD:470032"
ORIGIN      
        1 mfvptaalah tghdtgslma gighplggfd hvlamvavgl waaqa
//
LOCUS       WP_236015968             206 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail tip lysozyme [Sarcina ventriculi].
ACCESSION   WP_236015968
VERSION     WP_236015968.1
KEYWORDS    RefSeq.
SOURCE      Sarcina ventriculi
  ORGANISM  Sarcina ventriculi
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Sarcina.
REFERENCE   1  (residues 1 to 206)
  AUTHORS   Xiang,Y., Morais,M.C., Cohen,D.N., Bowman,V.D., Anderson,D.L. and
            Rossmann,M.G.
  TITLE     Crystal and cryoEM structural studies of a cell wall degrading
            enzyme in the bacteriophage phi29 tail
  JOURNAL   Proc Natl Acad Sci U S A 105 (28), 9552-9557 (2008)
   PUBMED   18606992
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037025.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18013.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Sarcina ventriculi"
                     /db_xref="taxon:1267"
     Protein         1..206
                     /product="phage tail tip lysozyme"
                     /calculated_mol_wt=23870
     Region          9..154
                     /region_name="Phage_lysozyme2"
                     /note="Phage tail lysozyme; pfam18013"
                     /db_xref="CDD:465617"
     Region          <155..205
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
ORIGIN      
        1 mlftseeitn akkirnyfin kgwtlqaicg mlgnfviesy lnptqweigm pewgletgyg
       61 iaqwtpatkl tdwcksenip yydlisqcay iqyemthnkq ffpsydynlt ateymtstks
      121 aytlgliwls nyerpnnpyq pirgelsqqw yellsntiss itytvklgnt lseiaekynv
      181 tvdnlkqwnn isnsniiypg qilkiy
//
LOCUS       WP_236015985             603 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase family 2 protein [Brucella endophytica].
ACCESSION   WP_236015985
VERSION     WP_236015985.1
KEYWORDS    RefSeq.
SOURCE      Brucella endophytica (Ochrobactrum endophyticum)
  ORGANISM  Brucella endophytica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 603)
  AUTHORS   Zhang,Y.L., Arakawa,E. and Leung,K.Y.
  TITLE     Novel Aeromonas hydrophila PPD134/91 genes involved in O-antigen
            and capsule biosynthesis
  JOURNAL   Infect Immun 70 (5), 2326-2335 (2002)
   PUBMED   11953367
  REMARK    Erratum:[Infect Immun 2002 Jun;70(6):3308]
REFERENCE   2  (residues 1 to 603)
  AUTHORS   Swartley,J.S., Liu,L.J., Miller,Y.K., Martin,L.E., Edupuganti,S.
            and Stephens,D.S.
  TITLE     Characterization of the gene cassette required for biosynthesis of
            the (alpha1-->6)-linked N-acetyl-D-mannosamine-1-phosphate capsule
            of serogroup A Neisseria meningitidis
  JOURNAL   J Bacteriol 180 (6), 1533-1539 (1998)
   PUBMED   9515923
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025017.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13632.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Brucella endophytica"
                     /db_xref="taxon:1963359"
     Protein         1..603
                     /product="glycosyltransferase family 2 protein"
                     /calculated_mol_wt=67972
     Region          68..>126
                     /region_name="legumain_C"
                     /note="C-terminal prodomain of legumain; cd21115"
                     /db_xref="CDD:411051"
     Region          193..433
                     /region_name="CESA_like_2"
                     /note="CESA_like_2 is a member of the cellulose synthase
                     superfamily; cd06427"
                     /db_xref="CDD:133049"
     Site            284..286
                     /site_type="active"
                     /note="DXD motif [active]"
                     /db_xref="CDD:133049"
ORIGIN      
        1 mvsagirqek lyeaiaselg vgfedrivss dillreddvp qnlrsirhvl vahgggrtll
       61 yiapaiddlv ilkrslaqtp slaerlrvcp pailaqmmrl rqerelvkia qemtppqfsa
      121 amvingwqgf vlaetiflli gfflfhplkt avvlhvsltl iffccvtmrl lastvaqkps
      181 llpagnilpr dmpvytilvp lykeaaiipq llqalsglnw paskldiklv ceaddpdtie
      241 aieshvlppc feivrvpnsg prtkpkalny alqfargefi viydaedrph pdqlleawna
      301 fltghrklac vqapllisnf rsdwltrmfa feyaalfrgl lpwmarmnlv iplggtsnhl
      361 rrecleavgg wdsynvteda dlglrlarfg yrvgvitrgt wedaprcytd wkkqrtrwlk
      421 gwmqtwlvhm rnpwrtwrdl gtvrfalsml ymsglilsal vyplmmvtav lvitaslrgp
      481 asfwsfyllc idavnitlay vsyymlglkt lnreerragl yfcwipvywl lmsfsawrav
      541 wqlfeaphlw ektphhpsga faipraarsp rqaavagagq qklgpradnd pvfaadrlkv
      601 aas
//
LOCUS       WP_236015986             219 aa            linear   BCT 02-MAR-2025
DEFINITION  disulfide bond formation protein B [Brucella endophytica].
ACCESSION   WP_236015986
VERSION     WP_236015986.1
KEYWORDS    RefSeq.
SOURCE      Brucella endophytica (Ochrobactrum endophyticum)
  ORGANISM  Brucella endophytica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 219)
  AUTHORS   Jander,G., Martin,N.L. and Beckwith,J.
  TITLE     Two cysteines in each periplasmic domain of the membrane protein
            DsbB are required for its function in protein disulfide bond
            formation
  JOURNAL   EMBO J 13 (21), 5121-5127 (1994)
   PUBMED   7957076
REFERENCE   2  (residues 1 to 219)
  AUTHORS   Bardwell,J.C., Lee,J.O., Jander,G., Martin,N., Belin,D. and
            Beckwith,J.
  TITLE     A pathway for disulfide bond formation in vivo
  JOURNAL   Proc Natl Acad Sci U S A 90 (3), 1038-1042 (1993)
   PUBMED   8430071
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014639.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02600.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Brucella endophytica"
                     /db_xref="taxon:1963359"
     Protein         1..219
                     /product="disulfide bond formation protein B"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006457 - protein folding [Evidence IEA]"
                     /calculated_mol_wt=23488
     Region          42..>141
                     /region_name="DsbB"
                     /note="Disulfide bond formation protein DsbB; cl46531"
                     /db_xref="CDD:480871"
ORIGIN      
        1 msahrtatrr rtskaaanvg pvraepylpa paeprlaalh sfyllamlav iaailtaamv
       61 mqygygelpc plcllqrval fgvafgiiqq frsgfslrnt glsllftifl lvvsvrqtll
      121 diyprpghsy igsaifglhm pvwsiliala lliayaakli lfadgshmrg appagqlvir
      181 alatvlglyv vaivlvnfgs vvlqcgldqc htfgyrllp
//
LOCUS       WP_236016039             302 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF535 family protein [Brucella endophytica].
ACCESSION   WP_236016039
VERSION     WP_236016039.1
KEYWORDS    RefSeq.
SOURCE      Brucella endophytica (Ochrobactrum endophyticum)
  ORGANISM  Brucella endophytica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 302)
  AUTHORS   Buchrieser,C., Glaser,P., Rusniok,C., Nedjari,H., D'Hauteville,H.,
            Kunst,F., Sansonetti,P. and Parsot,C.
  TITLE     The virulence plasmid pWR100 and the repertoire of proteins
            secreted by the type III secretion apparatus of Shigella flexneri
  JOURNAL   Mol Microbiol 38 (4), 760-771 (2000)
   PUBMED   11115111
REFERENCE   2  (residues 1 to 302)
  AUTHORS   Nakata,N., Sasakawa,C., Okada,N., Tobe,T., Fukuda,I., Suzuki,T.,
            Komatsu,K. and Yoshikawa,M.
  TITLE     Identification and characterization of virK, a virulence-associated
            large plasmid gene essential for intercellular spreading of
            Shigella flexneri
  JOURNAL   Mol Microbiol 6 (16), 2387-2395 (1992)
   PUBMED   1406277
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016293.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04393.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Brucella endophytica"
                     /db_xref="taxon:1963359"
     Protein         1..302
                     /product="DUF535 family protein"
                     /calculated_mol_wt=33699
     Region          27..272
                     /region_name="DUF535"
                     /note="Protein of unknown function (DUF535); cl01128"
                     /db_xref="CDD:470087"
ORIGIN      
        1 mhrqgraghw qeplinpilr qaaglgfrlr vrkaaafwlr slifprltlr wfrflsafse
       61 yqtrvpphdd ilrkslstfl vyrmprrekl dllmqhfeia geilrpkald klwqggtvna
      121 gtvagrdqay rlelslaenc gcrhegafsl clkrsedgma lcmasfiftr agggsysivi
      181 ggmqgprgee akravisatr dlgglrpkda vllalrgmmt rsavsylmav snarhainqr
      241 aakrrcrmra dldgywterg gvhfppfgfr ipferaaeeg tgsrrdaska acikagasvl
      301 rh
//
LOCUS       WP_236016061             134 aa            linear   BCT 02-MAR-2025
DEFINITION  thioredoxin fold domain-containing protein [Brucella endophytica].
ACCESSION   WP_236016061
VERSION     WP_236016061.1
KEYWORDS    RefSeq.
SOURCE      Brucella endophytica (Ochrobactrum endophyticum)
  ORGANISM  Brucella endophytica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13098.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Brucella endophytica"
                     /db_xref="taxon:1963359"
     Protein         1..134
                     /product="thioredoxin fold domain-containing protein"
                     /calculated_mol_wt=14220
     Region          <10..130
                     /region_name="dipZ"
                     /note="thiol:disulfide interchange protein precursor;
                     Provisional; PRK00293"
                     /db_xref="CDD:234717"
ORIGIN      
        1 msghasplrs ppisqdtahl tfehvdgaas lkeklatang rptlvyftad wcvicrgier
       61 dilsapeivt glkgfqrvkv dlttldeakq dlmrdlavig pptvvffdas gaelngsrli
      121 gdmtvetlaa sivn
//
LOCUS       WP_236016108             156 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Brucella endophytica].
ACCESSION   WP_236016108
VERSION     WP_236016108.1
KEYWORDS    RefSeq.
SOURCE      Brucella endophytica (Ochrobactrum endophyticum)
  ORGANISM  Brucella endophytica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02371.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Brucella endophytica"
                     /db_xref="taxon:1963359"
     Protein         1..156
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=16669
     Region          <37..154
                     /region_name="COG3547"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442768"
ORIGIN      
        1 maarrgqpqp dilagctldl vamrvqeknr lkapgartip gvgetiaafl iasmpelgsm
       61 nrrqaaclag caphprdsgr mtghrtttgg rrhirpmlfi aaltairgkn dlaaaykafl
      121 kagkpkrlal aaimrkiitr anarirdkta pqpqlt
//
LOCUS       WP_236016076             119 aa            linear   BCT 02-MAR-2025
DEFINITION  Rap1a/Tai family immunity protein [Brucella endophytica].
ACCESSION   WP_236016076
VERSION     WP_236016076.1
KEYWORDS    RefSeq.
SOURCE      Brucella endophytica (Ochrobactrum endophyticum)
  ORGANISM  Brucella endophytica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 119)
  AUTHORS   Srikannathasan,V., English,G., Bui,N.K., Trunk,K., O'Rourke,P.E.,
            Rao,V.A., Vollmer,W., Coulthurst,S.J. and Hunter,W.N.
  TITLE     Structural basis for type VI secreted peptidoglycan
            DL-endopeptidase function, specificity and neutralization in
            Serratia marcescens
  JOURNAL   Acta Crystallogr D Biol Crystallogr 69 (Pt 12), 2468-2482 (2013)
   PUBMED   24311588
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18602.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Brucella endophytica"
                     /db_xref="taxon:1963359"
     Protein         1..119
                     /product="Rap1a/Tai family immunity protein"
                     /calculated_mol_wt=12674
     Region          24..115
                     /region_name="Rap1a"
                     /note="Rap1a immunity proteins; pfam18602"
                     /db_xref="CDD:465818"
ORIGIN      
        1 malyavagif sssatagdrt wvfsgselid alkgdlapet adkelkrmls targtayvag
       61 vadalqgrew cgagailphe mtdrvytylk dlppeqlken aaplvgqals kefpckkrk
//
LOCUS       WP_236016134             391 aa            linear   BCT 02-MAR-2025
DEFINITION  linear amide C-N hydrolase [Brucella endophytica].
ACCESSION   WP_236016134
VERSION     WP_236016134.1
KEYWORDS    RefSeq.
SOURCE      Brucella endophytica (Ochrobactrum endophyticum)
  ORGANISM  Brucella endophytica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 391)
  AUTHORS   Coleman,J.P. and Hudson,L.L.
  TITLE     Cloning and characterization of a conjugated bile acid hydrolase
            gene from Clostridium perfringens
  JOURNAL   Appl Environ Microbiol 61 (7), 2514-2520 (1995)
   PUBMED   7618863
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014345.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02275.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Brucella endophytica"
                     /db_xref="taxon:1963359"
     Protein         1..391
                     /product="linear amide C-N hydrolase"
                     /calculated_mol_wt=42057
     Region          27..348
                     /region_name="Ntn_hydrolase"
                     /note="The Ntn hydrolases (N-terminal nucleophile) are a
                     diverse superfamily of of enzymes that are activated
                     autocatalytically via an N-terminally lcated nucleophilic
                     amino acid. N-terminal nucleophile (NTN-) hydrolase
                     superfamily, which contains a...; cl00467"
                     /db_xref="CDD:469781"
ORIGIN      
        1 mpmrktvcal msgcvavmal aapalacttl ryfdaanrly lgrtlelaaa lpyqlvyfpa
       61 gqkfksdevs ghpslnyqsr yaifgiafpd vspggkakia lndlklidgi neaglsfall
      121 aypnvngpqk qiektraila avdlgtwtlg qfasaadvrq alarqpamla piralggaeg
      181 pfhfivydrt gasiviefnk gketvyenpv gvmtngpqfs whltnlnnyt hlsnidkssg
      241 sfggfkvkqp dsgistaglp asdtsvgrfv raafystytq kaktpdqavr tlahvmnnfd
      301 rpigisinks ggegdtldkg lgitgeseyt twtrladler lrffvrdyta lnytmfelgk
      361 lrttkkpavi plaafidkpd gtsavmdaag k
//
LOCUS       WP_236016170              67 aa            linear   BCT 02-MAR-2025
DEFINITION  type II 3-dehydroquinate dehydratase [Brucella endophytica].
ACCESSION   WP_236016170
VERSION     WP_236016170.1
KEYWORDS    RefSeq.
SOURCE      Brucella endophytica (Ochrobactrum endophyticum)
  ORGANISM  Brucella endophytica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013392.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01220.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Brucella endophytica"
                     /db_xref="taxon:1963359"
     Protein         1..67
                     /product="type II 3-dehydroquinate dehydratase"
                     /EC_number="4.2.1.10"
                     /GO_function="GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=7296
     Region          <12..39
                     /region_name="DHQase_II"
                     /note="Dehydroquinase (DHQase), type II. Dehydroquinase
                     (or 3-dehydroquinate dehydratase) catalyzes the reversible
                     dehydration of 3-dehydroquinate to form
                     3-dehydroshikimate. This reaction is part of two metabolic
                     pathways: the biosynthetic shikimate pathway...; cl00505"
                     /db_xref="CDD:469794"
ORIGIN      
        1 mlaydgpdhr ahmsniwkre pfrhhlyisk aatgvivgla rngvvvhgif gfrayatdls
       61 psihvat
//
LOCUS       WP_236016249             332 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease [Brucella endophytica].
ACCESSION   WP_236016249
VERSION     WP_236016249.1
KEYWORDS    RefSeq.
SOURCE      Brucella endophytica (Ochrobactrum endophyticum)
  ORGANISM  Brucella endophytica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 332)
  AUTHORS   Bujnicki,J.M. and Rychlewski,L.
  TITLE     Identification of a PD-(D/E)XK-like domain with a novel
            configuration of the endonuclease active site in the
            methyl-directed restriction enzyme Mrr and its homologs
  JOURNAL   Gene 267 (2), 183-191 (2001)
   PUBMED   11313145
REFERENCE   2  (residues 1 to 332)
  AUTHORS   Waite-Rees,P.A., Keating,C.J., Moran,L.S., Slatko,B.E.,
            Hornstra,L.J. and Benner,J.S.
  TITLE     Characterization and expression of the Escherichia coli Mrr
            restriction system
  JOURNAL   J Bacteriol 173 (16), 5207-5219 (1991)
   PUBMED   1650347
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016362.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04471.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Brucella endophytica"
                     /db_xref="taxon:1963359"
     Protein         1..332
                     /product="restriction endonuclease"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_process="GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /calculated_mol_wt=36848
     Region          1..188
                     /region_name="COG4127"
                     /note="Predicted restriction endonuclease, Mrr-cat
                     superfamily [General function prediction only]"
                     /db_xref="CDD:443303"
     Region          192..306
                     /region_name="Mrr_cat"
                     /note="Restriction endonuclease; pfam04471"
                     /db_xref="CDD:461322"
ORIGIN      
        1 mskswmvrae rdgrlfdafk dvsavaigwn evgdlshvkt rkaiadlvaa awpemkpqsi
       61 amatgqlyrf vneidvgdmi vtynpsrrvy lvgevtgpyr ydtsvdpeda qfrpvrwhge
      121 vsrdllsves rnslgsistl frisnevaae lkkamtsgqs akpeataaae aieddlfksm
      181 esrarefikd kvnaltwddm qelvagllrs lgyktrvsea gpdrgkdiva spdgfgfesp
      241 rivvevkhrk gtmgapdvrs flggrhpqdk glyvstggft rearyeaera niplalmdld
      301 dlvkslleqy dkldsetqql lplkrifvpa wa
//
LOCUS       WP_236016298             148 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Brucella endophytica].
ACCESSION   WP_236016298
VERSION     WP_236016298.1
KEYWORDS    RefSeq.
SOURCE      Brucella endophytica (Ochrobactrum endophyticum)
  ORGANISM  Brucella endophytica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Brucella endophytica"
                     /db_xref="taxon:1963359"
     Protein         1..148
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=16360
     Region          <49..147
                     /region_name="GlxA"
                     /note="Transcriptional regulator GlxA, contains an amidase
                     domain and an AraC-type DNA-binding HTH domain
                     [Transcription]; COG4977"
                     /db_xref="CDD:444002"
ORIGIN      
        1 mttanhvsss siegrrkadl drgiavravg mdeksptklk telsrynark vqafmrenla
       61 rkltvadlae icdlspshfi saftetfgqa pygyllnlrl ahaerlltqr dmpiaevayl
      121 sgfssqshlt tamkkmkgkt psmirgrk
//
LOCUS       WP_236016326             478 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase domain-containing protein [Brucella
            endophytica].
ACCESSION   WP_236016326
VERSION     WP_236016326.1
KEYWORDS    RefSeq.
SOURCE      Brucella endophytica (Ochrobactrum endophyticum)
  ORGANISM  Brucella endophytica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 478)
  AUTHORS   Xiong,Y. and Eickbush,T.H.
  TITLE     Origin and evolution of retroelements based upon their reverse
            transcriptase sequences
  JOURNAL   EMBO J 9 (10), 3353-3362 (1990)
   PUBMED   1698615
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00078.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Brucella endophytica"
                     /db_xref="taxon:1963359"
     Protein         1..478
                     /product="reverse transcriptase domain-containing protein"
                     /calculated_mol_wt=54422
     Region          58..363
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            order(140..145,251..252,285,287..288,360..361)
                     /site_type="active"
                     /db_xref="CDD:238185"
     Site            order(140..145,251,287)
                     /site_type="other"
                     /note="NTP binding site [chemical binding]"
                     /db_xref="CDD:238185"
     Site            252
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:238185"
ORIGIN      
        1 mkawtasvrr yphfdpvisd akaeavvtdp trvakhtfyp flkydegwtv yaekgkhgkr
       61 kdrpirfaar ldscifsyyr hllsvpyear lqaeglsdsv iayrripknk ggggksnidf
      121 alsaveaiqs qgncctiald issffetlnh erlrevwtel lgvprlrddh fkvyraitry
      181 aqvdvvkayt rlglygdktd rngkvrpgyl kakseipvql cdgrtfqaki arsatqpsii
      241 evnkldvgvp qgaplsdlla nayllefdky lrdicskfsg rffrysddil vitpipevda
      301 lelekeirna ittygkglli keeksaihrf evggsrqtvr tikasdkdgk tmpnkpfeyl
      361 gfrydgrhvf irdktmsnlh rkiasvcrvt airqvkryqg ktihdilalt diekliqafg
      421 svedfhlkag dyrswtftty akrasktmga lgkpiarqik nlrsairrrl eyeltrar
//
LOCUS       WP_236016342             229 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Brucella endophytica].
ACCESSION   WP_236016342
VERSION     WP_236016342.1
KEYWORDS    RefSeq.
SOURCE      Brucella endophytica (Ochrobactrum endophyticum)
  ORGANISM  Brucella endophytica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Mullin,D.A., Zies,D.L., Mullin,A.H., Caballera,N. and Ely,B.
  TITLE     Genetic organization and transposition properties of IS511
  JOURNAL   Mol Gen Genet 254 (4), 456-463 (1997)
   PUBMED   9180700
REFERENCE   2  (residues 1 to 229)
  AUTHORS   Fischer,J., Maier,H., Viell,P. and Altenbuchner,J.
  TITLE     The use of an improved transposon mutagenesis system for DNA
            sequencing leads to the characterization of a new insertion
            sequence of Streptomyces lividans 66
  JOURNAL   Gene 180 (1-2), 81-89 (1996)
   PUBMED   8973350
REFERENCE   3  (residues 1 to 229)
  AUTHORS   Zekri,S. and Toro,N.
  TITLE     Identification and nucleotide sequence of Rhizobium meliloti
            insertion sequence ISRm6, a small transposable element that belongs
            to the IS3 family
  JOURNAL   Gene 175 (1-2), 43-48 (1996)
   PUBMED   8917074
  REMARK    Erratum:[Gene 1997 Mar 25;188(1):149]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01527.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Brucella endophytica"
                     /db_xref="taxon:1963359"
     Protein         1..229
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=25097
     Region          144..>228
                     /region_name="transpos_IS3"
                     /note="IS3 family transposase; NF033516"
                     /db_xref="CDD:468052"
ORIGIN      
        1 mrqparpfiv evkkkrglqk qtrsiwadvd lsafaaetan etpfaqlldh pvvdssmslv
       61 naatkhksfa ehhmadpqet gaeqialeat akaeapktke matrpskaka esrpsvskka
      121 armaeastva vrsrrklhsp qeraqilsdi eqsvgggqsi ksaakeagis eqtyyqwkkt
      181 aapvaapvpe nndlkdllal eeenkrlknl laerlrkena elrkklgle
//
LOCUS       WP_236016353              97 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Brucella endophytica].
ACCESSION   WP_236016353
VERSION     WP_236016353.1
KEYWORDS    RefSeq.
SOURCE      Brucella endophytica (Ochrobactrum endophyticum)
  ORGANISM  Brucella endophytica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00872.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Brucella endophytica"
                     /db_xref="taxon:1963359"
     Protein         <1..97
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <23..83
                     /region_name="Transposase_mut"
                     /note="Transposase, Mutator family; cl27632"
                     /db_xref="CDD:474953"
ORIGIN      
        1 gfysargwii pplpwptfap plslhstnpi erlngeikrr tevvgifpnd eaivrlvgal
       61 llehndewav qrarymtlet maqmsddpqi slpaaas
//
LOCUS       WP_236016377             221 aa            linear   BCT 02-MAR-2025
DEFINITION  transglycosylase SLT domain-containing protein [Salipiger abyssi].
ACCESSION   WP_236016377
VERSION     WP_236016377.1
KEYWORDS    RefSeq.
SOURCE      Salipiger abyssi
  ORGANISM  Salipiger abyssi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 221)
  AUTHORS   Koraimann,G.
  TITLE     Lytic transglycosylases in macromolecular transport systems of
            Gram-negative bacteria
  JOURNAL   Cell Mol Life Sci 60 (11), 2371-2388 (2003)
   PUBMED   14625683
REFERENCE   2  (residues 1 to 221)
  AUTHORS   Mushegian,A.R., Fullner,K.J., Koonin,E.V. and Nester,E.W.
  TITLE     A family of lysozyme-like virulence factors in bacterial pathogens
            of plants and animals
  JOURNAL   Proc Natl Acad Sci U S A 93 (14), 7321-7326 (1996)
   PUBMED   8692991
REFERENCE   3  (residues 1 to 221)
  AUTHORS   Thunnissen,A.M., Rozeboom,H.J., Kalk,K.H. and Dijkstra,B.W.
  TITLE     Structure of the 70-kDa soluble lytic transglycosylase complexed
            with bulgecin A. Implications for the enzymatic mechanism
  JOURNAL   Biochemistry 34 (39), 12729-12737 (1995)
   PUBMED   7548026
REFERENCE   4  (residues 1 to 221)
  AUTHORS   Koonin,E.V. and Rudd,K.E.
  TITLE     A conserved domain in putative bacterial and bacteriophage
            transglycosylases
  JOURNAL   Trends Biochem Sci 19 (3), 106-107 (1994)
   PUBMED   8203016
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013618.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01464.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Salipiger abyssi"
                     /db_xref="taxon:1250539"
     Protein         1..221
                     /product="transglycosylase SLT domain-containing protein"
                     /calculated_mol_wt=24362
     Region          38..168
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
ORIGIN      
        1 miylvltlst icmfalpvpa apsaicdraa qeasrqtgvp ievlmaitra etgrarngqt
       61 rpwpwtinvq geghwfgtrh aarqhavatf akgirsfdlg cfqinyrwhg gafrsleeml
      121 dptanalyaa rflrrlhket gswteaagay hsrtpkyaer ykrryramha slssehtdne
      181 sparvarvnr fpllrregva araslaplae gasaflpglg g
//
LOCUS       WP_236016381              94 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6455 family protein [Salipiger abyssi].
ACCESSION   WP_236016381
VERSION     WP_236016381.1
KEYWORDS    RefSeq.
SOURCE      Salipiger abyssi
  ORGANISM  Salipiger abyssi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040427.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20056.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Salipiger abyssi"
                     /db_xref="taxon:1250539"
     Protein         1..94
                     /product="DUF6455 family protein"
                     /calculated_mol_wt=10480
     Region          8..91
                     /region_name="DUF6455"
                     /note="Family of unknown function (DUF6455); pfam20056"
                     /db_xref="CDD:466276"
ORIGIN      
        1 mfdarpnqpl gdetdhywlv qrmaqangtd lvaaadagll tqhdwagmvq rcrgcqwadg
       61 cqrwldqpet alrdtpetcv nrahfaalqa rlqe
//
LOCUS       WP_236016595             296 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Salipiger abyssi].
ACCESSION   WP_236016595
VERSION     WP_236016595.1
KEYWORDS    RefSeq.
SOURCE      Salipiger abyssi
  ORGANISM  Salipiger abyssi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Salipiger abyssi"
                     /db_xref="taxon:1250539"
     Protein         1..296
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=32866
     Region          19..114
                     /region_name="cupin_HpaA-like_N"
                     /note="AraC/XylS family transcriptional regulators similar
                     to HpaA, N-terminal cupin domain; cd06999"
                     /db_xref="CDD:380403"
     Region          206..289
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
ORIGIN      
        1 mdargndwyf sgmrenspip afnlfgetsa fpdvihcerv fdrarlhdwk isphrhhqma
       61 qvfhmeqgta ratldghdik lgngdflyvp pqvvhgftfd rgtegivlsl pspvvqrlgp
      121 dspalsawlg aphhgilset aagliaqiah lhdksgtfra qrlvalshal latlaedgtq
      181 mpapeqdmtr qmqrldalis ahltegwsaa dyahalhmtq ghlnrivrrd tgatltqyle
      241 tammteacrh laftrlpvae vgyrlgyadp pyftrrfrar mgetptayrt rvagei
//
LOCUS       WP_236016607             513 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein [Salipiger abyssi].
ACCESSION   WP_236016607
VERSION     WP_236016607.1
KEYWORDS    RefSeq.
SOURCE      Salipiger abyssi
  ORGANISM  Salipiger abyssi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 513)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Salipiger abyssi"
                     /db_xref="taxon:1250539"
     Protein         1..513
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=54555
     Region          56..510
                     /region_name="ALDH_PhdK-like"
                     /note="Nocardioides 2-carboxybenzaldehyde dehydrogenase,
                     PhdK-like; cd07107"
                     /db_xref="CDD:143425"
     Site            order(178..182,190,205,207..208,254..257,260,263..264,
                     278..280,313,414,416,442,480)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143425"
     Site            order(182,278,310,313)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143425"
     Site            order(278,310,313)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143425"
ORIGIN      
        1 mtsirdlsyf evndgweeai vpdslnfdie qvlpqhadly fggawhkplg gvyddtlnpa
       61 tgrvltpvat agrddvdaav aaarkgflew rdvpplerar ilkeiaallr khgdelamid
      121 sancgnpyte mrgdaaiaaa qmdlfaglvt emkgdtipmg aervnmtlre plgvvarila
      181 fnhpfmfcgg kmaaplaagn sviikppvqa plsalrlaei vdgllpkgvf svlpggveag
      241 aglaehpdva kvtligsvpa gravmksasa tvkpvllelg gknaliaypd skpekiadal
      301 vagmnfgwcg qscgstsraf lhedihdevl syvadkiary kpgiptdpet tmgaivsrtq
      361 fdrvmgyies aksegaravt gghavtegdl adgcfiapti fadvtpemti areeifgpvl
      421 avrkwreesa mleevnglel gltcaiwtrd lvtahraasr veagfvwine vgrhflgapf
      481 ggvkqsgigr eegigelisf theknvhinl agq
//
LOCUS       WP_236016685             301 aa            linear   BCT 02-MAR-2025
DEFINITION  META domain-containing protein [Salipiger abyssi].
ACCESSION   WP_236016685
VERSION     WP_236016685.1
KEYWORDS    RefSeq.
SOURCE      Salipiger abyssi
  ORGANISM  Salipiger abyssi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 301)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
REFERENCE   2  (residues 1 to 301)
  AUTHORS   Uliana,S.R., Goyal,N., Freymuller,E. and Smith,D.F.
  TITLE     Leishmania: overexpression and comparative structural analysis of
            the stage-regulated meta 1 gene
  JOURNAL   Exp Parasitol 92 (3), 183-191 (1999)
   PUBMED   10403759
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015669.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03724.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Salipiger abyssi"
                     /db_xref="taxon:1250539"
     Protein         1..301
                     /product="META domain-containing protein"
                     /calculated_mol_wt=30471
     Region          12..111
                     /region_name="HslJ"
                     /note="Heat shock protein HslJ [Posttranslational
                     modification, protein turnover, chaperones]; COG3187"
                     /db_xref="CDD:442420"
     Region          127..206
                     /region_name="YraI"
                     /note="Uncharacterized conserved protein YraI [Function
                     unknown]; COG4991"
                     /db_xref="CDD:444015"
ORIGIN      
        1 mrlfalalac mtapaaasdw tiarvdgaat igaptvtfad ggisgstgcn gftgqadvaa
       61 gvlqlspala mtrraclgaa lsaqesrltt llqgdvqmqv dpfddsltlv gngvtarlvp
      121 glpqpemssa ayvivsgvda tlnirsgatt sagvvahapl giilrnegce eggdrtwcqi
      181 sfidasgieg waaaeflspa sairragael fdqigrvdcg tldgpaapcd fglarendgs
      241 gamliylpdn rrlllefsga svvvsgsdga aefatemgda dvivtsgtdr vtlpmtvllg
      301 e
//
LOCUS       WP_236016736             102 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: mercuric transporter MerT family protein
            [Rhodobacterales].
ACCESSION   WP_236016736
VERSION     WP_236016736.1
KEYWORDS    RefSeq.
SOURCE      Rhodobacterales
  ORGANISM  Rhodobacterales
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria.
REFERENCE   1  (residues 1 to 102)
  AUTHORS   Reniero,D., Mozzon,E., Galli,E. and Barbieri,P.
  TITLE     Two aberrant mercury resistance transposons in the Pseudomonas
            stutzeri plasmid pPB
  JOURNAL   Gene 208 (1), 37-42 (1998)
   PUBMED   9479042
REFERENCE   2  (residues 1 to 102)
  AUTHORS   Kholodii,G.Y., Yurieva,O.V., Gorlenko,Z.M., Mindlin,S.Z.,
            Bass,I.A., Lomovskay,O.L., Kopteva,A.V. and Nikiforov,V.G.
  TITLE     Tn5041: a chimeric mercury resistance transposon closely related to
            the toluene degradative transposon Tn4651
  JOURNAL   Microbiology (Reading) 143 (Pt 8), 2549-2556 (1997)
   PUBMED   9274008
REFERENCE   3  (residues 1 to 102)
  AUTHORS   Yurieva,O., Kholodii,G., Minakhin,L., Gorlenko,Z., Kalyaeva,E.,
            Mindlin,S. and Nikiforov,V.
  TITLE     Intercontinental spread of promiscuous mercury-resistance
            transposons in environmental bacteria
  JOURNAL   Mol Microbiol 24 (2), 321-329 (1997)
   PUBMED   9159519
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014465.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02411.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Rhodobacterales"
                     /db_xref="taxon:204455"
     Protein         1..102
                     /product="mercuric transporter MerT family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=10775
     Region          1..102
                     /region_name="MerT"
                     /note="MerT mercuric transport protein; cl03578"
                     /db_xref="CDD:186578"
ORIGIN      
        1 mgaflasacc vgplvlltlg isgawignlt alepfkpifa vialgfigag frqvyfrkpt
       61 vcepgsycar pssaritksa lwtslilvla altidwwapl ly
//
LOCUS       WP_236016877             398 aa            linear   BCT 02-MAR-2025
DEFINITION  WxL domain-containing protein [Enterococcus lactis].
ACCESSION   WP_236016877
VERSION     WP_236016877.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus lactis
  ORGANISM  Enterococcus lactis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 398)
  AUTHORS   Brinster,S., Furlan,S. and Serror,P.
  TITLE     C-terminal WxL domain mediates cell wall binding in Enterococcus
            faecalis and other gram-positive bacteria
  JOURNAL   J Bacteriol 189 (4), 1244-1253 (2007)
   PUBMED   16963569
REFERENCE   2  (residues 1 to 398)
  AUTHORS   Siezen,R., Boekhorst,J., Muscariello,L., Molenaar,D., Renckens,B.
            and Kleerebezem,M.
  TITLE     Lactobacillus plantarum gene clusters encoding putative
            cell-surface protein complexes for carbohydrate utilization are
            conserved in specific gram-positive bacteria
  JOURNAL   BMC Genomics 7, 126 (2006)
   PUBMED   16723015
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025108.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13731.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Enterococcus lactis"
                     /db_xref="taxon:357441"
     Protein         1..398
                     /product="WxL domain-containing protein"
                     /calculated_mol_wt=42280
     Region          21..>112
                     /region_name="WxL"
                     /note="WxL domain surface cell wall-binding; pfam13731"
                     /db_xref="CDD:433439"
ORIGIN      
        1 migtlllstl llgglatpaf aegqatskgd itfteptntv vpldptdpsk pvepadpenp
       61 gtgqtgpltl dvvpelpfgt heiesgtkty qidaskndtp ylqvsdrrgv gadsqlknls
      121 rqpdegtpls alsgdtiqen vtftltksgd aitdkkitis lpenttying tlklngttva
      181 dtgvqqgvsv padllskvgd tihltynyql ntvdtsvqsv siptkaavls snitladgdk
      241 lpnpvvqtss ktilvpkqel tlvdvpddft fgndlpkplk tsyyeakgdf sfdvrdtrlp
      301 stspwqltgt ltssfkndqg qelsgtklyf nhavskqliq qgqntmiyqs dgtakgevlv
      361 dfpdtdglll evnsstnaqp gvryqgtitw elsagpis
//
LOCUS       WP_236016425             285 aa            linear   BCT 02-MAR-2025
DEFINITION  delta-class carbonic anhydrase [Salipiger abyssi].
ACCESSION   WP_236016425
VERSION     WP_236016425.1
KEYWORDS    RefSeq.
SOURCE      Salipiger abyssi
  ORGANISM  Salipiger abyssi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 285)
  AUTHORS   Samukawa,M., Shen,C., Hopkinson,B.M. and Matsuda,Y.
  TITLE     Localization of putative carbonic anhydrases in the marine diatom,
            Thalassiosira pseudonana
  JOURNAL   Photosynth Res 121 (2-3), 235-249 (2014)
   PUBMED   24414291
REFERENCE   2  (residues 1 to 285)
  AUTHORS   Lee,R.B., Smith,J.A. and Rickaby,R.E.
  TITLE     Cloning, Expression and Characterization of the delta-carbonic
            Anhydrase of Thalassiosira weissflogii (Bacillariophyceae)
  JOURNAL   J Phycol 49 (1), 170-177 (2013)
   PUBMED   27008398
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022036.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10563.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Salipiger abyssi"
                     /db_xref="taxon:1250539"
     Protein         1..285
                     /product="delta-class carbonic anhydrase"
                     /EC_number="4.2.1.1"
                     /GO_function="GO:0004089 - carbonate dehydratase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=30003
     Region          77..252
                     /region_name="CA_like"
                     /note="Delta carbonic anhydrase; pfam10563"
                     /db_xref="CDD:431360"
ORIGIN      
        1 mhryrkalaa lalalcatga laesghapas hgaapaaapq aasggeicqg fgpqtprdis
       61 nphgrnparf elapppedln lcnihthtna ehmgpgfsiy agagehggfr cagsarltpa
      121 elsrprggar vfegvapgdt ievhwvyssc dvapgpglga clsercqnpq lrvesqvflv
      181 vndpnaldfr dfiyfgtmrq glyqpralpt gtgrpvefrg sttgtsysqq vcsplqvtws
      241 vrprcarldi atldawaamg nvfeeshshg vralvtapal lspmd
//
LOCUS       WP_236016888             620 aa            linear   BCT 02-MAR-2025
DEFINITION  PRD domain-containing protein, partial [Enterococcus lactis].
ACCESSION   WP_236016888
VERSION     WP_236016888.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus lactis
  ORGANISM  Enterococcus lactis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 620)
  AUTHORS   Graille,M., Zhou,C.Z., Receveur-Brechot,V., Collinet,B.,
            Declerck,N. and van Tilbeurgh,H.
  TITLE     Activation of the LicT transcriptional antiterminator involves a
            domain swing/lock mechanism provoking massive structural changes
  JOURNAL   J Biol Chem 280 (15), 14780-14789 (2005)
   PUBMED   15699035
REFERENCE   2  (residues 1 to 620)
  AUTHORS   Declerck,N., Dutartre,H., Receveur,V., Dubois,V., Royer,C.,
            Aymerich,S. and van Tilbeurgh,H.
  TITLE     Dimer stabilization upon activation of the transcriptional
            antiterminator LicT
  JOURNAL   J Mol Biol 314 (4), 671-681 (2001)
   PUBMED   11733988
REFERENCE   3  (residues 1 to 620)
  AUTHORS   van Tilbeurgh,H. and Declerck,N.
  TITLE     Structural insights into the regulation of bacterial signalling
            proteins containing PRDs
  JOURNAL   Curr Opin Struct Biol 11 (6), 685-693 (2001)
   PUBMED   11751049
REFERENCE   4  (residues 1 to 620)
  AUTHORS   van Tilbeurgh,H., Le Coq,D. and Declerck,N.
  TITLE     Crystal structure of an activated form of the PTS regulation domain
            from the LicT transcriptional antiterminator
  JOURNAL   EMBO J 20 (14), 3789-3799 (2001)
   PUBMED   11447120
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013070.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00874.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Enterococcus lactis"
                     /db_xref="taxon:357441"
     Protein         <1..620
                     /product="PRD domain-containing protein"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
     Region          <1..604
                     /region_name="LevR"
                     /note="Transcriptional regulatory protein LevR, contains
                     PRD, AAA+ and EIIA domains [Transcription]; COG3933"
                     /db_xref="CDD:443134"
ORIGIN      
        1 ffitessild kelqvsyqmi dfllnsdleg nvgkikniik yacgnayvhq knsqtifvrl
       61 kdlpleynlk fkeqfskpkk kmsdrtylpn ttqqihlesk etqllrnffd evvsefkkvq
      121 kkesqpqefi edtvsrvtqm mdefifqgty ekeeslysvl tyhirqtldm myknygfeqd
      181 gnrvvslasy lylkdntdil dsdygwqeqk nelmefldsf letpfwyakk llsylsqqld
      241 qrlldedivf vtfyfyslqi sdlpndvkci vlahgystas slanvvnrml gknvfqaydm
      301 pinitldkve tkiiryindy stdsglillv dmgsfnqlge rlsnhikspl viidnvstpl
      361 vlevgehivn gnsvtevyea itvenriqkq liipevnkkk aiitccytgi gsatqiqeil
      421 qkclgdsake ltilpydykk laenkmyetp fqlydvlmiv gtenpkinqv pyigldqlin
      481 geavsefael lheqvdidse afksqlifnf sinkivenlt ildamkvlrl vqkavkelek
      541 lmgiefsnnq lfllymhccs mierilrkes vdeqadikey iqkeghnmel ihqafqevek
      601 eytielplle lrllndivkd
//
LOCUS       WP_236016982             267 aa            linear   BCT 02-MAR-2025
DEFINITION  IclR family transcriptional regulator domain-containing protein
            [Siminovitchia thermophila].
ACCESSION   WP_236016982
VERSION     WP_236016982.1
KEYWORDS    RefSeq.
SOURCE      Siminovitchia thermophila
  ORGANISM  Siminovitchia thermophila
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Siminovitchia.
REFERENCE   1  (residues 1 to 267)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
REFERENCE   2  (residues 1 to 267)
  AUTHORS   Galinier,A., Bleicher,F., Negre,D., Perriere,G., Duclos,B.,
            Cozzone,A.J. and Cortay,J.C.
  TITLE     Primary structure of the intergenic region between aceK and iclR in
            the Escherichia coli chromosome
  JOURNAL   Gene 97 (1), 149-150 (1991)
   PUBMED   1995429
REFERENCE   3  (residues 1 to 267)
  AUTHORS   Smith,C.P. and Chater,K.F.
  TITLE     Structure and regulation of controlling sequences for the
            Streptomyces coelicolor glycerol operon
  JOURNAL   J Mol Biol 204 (3), 569-580 (1988)
   PUBMED   3225846
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01614.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Siminovitchia thermophila"
                     /db_xref="taxon:1245522"
     Protein         1..267
                     /product="IclR family transcriptional regulator
                     domain-containing protein"
                     /calculated_mol_wt=29435
     Region          12..259
                     /region_name="pcaR_pcaU"
                     /note="beta-ketoadipate pathway transcriptional
                     regulators, PcaR/PcaU/PobR family; TIGR02431"
                     /db_xref="CDD:131484"
ORIGIN      
        1 msiektknst ksadfvqsle rglaviqafs eehpsltise aakitgisrp avrrilltlk
       61 elgyaecand rfsltvrtls lgyaylsskn iwhiaqphmk hfvdktgess sisvldetev
      121 vyvarvatkr imtiaidvgt rlpahatsmg qvllahlsea eleeyfkrat lesftnntit
      181 dksqllnvfe qirengwimv eqqleeglrs iavpirnsng kviaaincsa hagritssvi
      241 qeqflplllk taekiskdla tydssll
//
LOCUS       WP_236016988             623 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: sigma 54-interacting transcriptional regulator
            [Siminovitchia].
ACCESSION   WP_236016988
VERSION     WP_236016988.1
KEYWORDS    RefSeq.
SOURCE      Siminovitchia
  ORGANISM  Siminovitchia
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 623)
  AUTHORS   Studholme,D.J. and Dixon,R.
  TITLE     Domain architectures of sigma54-dependent transcriptional
            activators
  JOURNAL   J Bacteriol 185 (6), 1757-1767 (2003)
   PUBMED   12618438
REFERENCE   2  (residues 1 to 623)
  AUTHORS   Chaney,M., Grande,R., Wigneshweraraj,S.R., Cannon,W., Casaz,P.,
            Gallegos,M.T., Schumacher,J., Jones,S., Elderkin,S., Dago,A.E.,
            Morett,E. and Buck,M.
  TITLE     Binding of transcriptional activators to sigma 54 in the presence
            of the transition state analog ADP-aluminum fluoride: insights into
            activator mechanochemical action
  JOURNAL   Genes Dev 15 (17), 2282-2294 (2001)
   PUBMED   11544185
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00158.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Siminovitchia"
                     /db_xref="taxon:2837510"
     Protein         1..623
                     /product="sigma 54-interacting transcriptional regulator"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008134 - transcription factor binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=70234
     Region          53..194
                     /region_name="PrpR_N"
                     /note="Propionate catabolism activator; pfam06506"
                     /db_xref="CDD:428980"
     Region          192..621
                     /region_name="RocR"
                     /note="RocR-type transcriptional regulator, contains PAS,
                     AAA-type ATPase, and DNA-binding Fis domains
                     [Transcription, Signal transduction mechanisms]; COG3829"
                     /db_xref="CDD:443041"
ORIGIN      
        1 mklvvpqkny itnaldrfhe fllteesedr egpdfileev vvptdqvrgk tfdadviisr
       61 glvskllkes hdstpivdip vqgidlirsl decrkrfgqk kvavigaanm ifgvenledi
      121 ielpihkyil ddirssdhlv dlaasegcev ilsgyntcky adqiglrtml ietgkesfrq
      181 alteakrlai vsrkeqekaq qyktildnay egviavdlnr kvsifnisaq kilgisgshl
      241 lgapitdvls kgelldrlld ekdfhediis yesiqlsvkk agiflkgkrv gdmvafqdvt
      301 giqemegkir kkmhmrghva kysfgdifhk skaiqevidt aksyseadsn iliigetgtg
      361 kemfaqsvhn hsqrsnnpfv aincaalpes lleselfgyv egaftgamkg gkqgffelah
      421 rgtlfldeig eispklqsrl lrvlqereim rvgddkvipv dvriiaatnq dllkmvqnne
      481 fradlfyrls vldlklpplr erpediavla eaflqkvtft ksalqllseq rwegnirqlq
      541 nfcerltvlc kgqvidelel akhlpeqger estesnpsfl sekeriiral ekhhfhkgka
      601 aaelgmsrtt fwrklktwri etk
//
LOCUS       WP_236017050             553 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: thiamine pyrophosphate-dependent enzyme
            [Siminovitchia].
ACCESSION   WP_236017050
VERSION     WP_236017050.1
KEYWORDS    RefSeq.
SOURCE      Siminovitchia
  ORGANISM  Siminovitchia
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 553)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Siminovitchia"
                     /db_xref="taxon:2837510"
     Protein         1..553
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /calculated_mol_wt=60989
     Region          8..549
                     /region_name="PRK08155"
                     /note="acetolactate synthase large subunit; cl39075"
                     /db_xref="CDD:453955"
ORIGIN      
        1 mtklmsvada ivkcmeleti shvfcvpges ylplmdsiyd sqhiklisar heggaafmad
       61 aygkatrkpg vamatrgvgg anlaigihta yqdstpmvvf lgqvhskfrg regfqevdld
      121 qffghiakwt velkdaertp elihrafria qsgrpgpvvv slpedvlree avmnigppvd
      181 vpsprptsee vekverllgd aerpviiagg gviashgerl lvefaeklhi pvvasfrrqd
      241 vfpnnhrlyv ghaglstfps vintmkeadv vlaigtrlse ittqdyrfpt teqrlihidi
      301 dydtlgkvrn pqigivsdat salkelltin idalwgdwtk srrsdyeqdm lkdlnededw
      361 ikmrgviqtl qeklpkdaii tndagnfagw lhsfycfekp ntyigptsga mgyglpgaig
      421 aklahpdkvv vslsgdggfm mtiqeletav rygvpviali fnnsmygtir mhqemhyper
      481 vigtelnhvd fakvsealgv kafraktnve ftkaiehala sdspvvievl tnpeqislnd
      541 tihsirqksk qhn
//
LOCUS       WP_236017068             124 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: sigma factor-like helix-turn-helix DNA-binding
            protein [Siminovitchia].
ACCESSION   WP_236017068
VERSION     WP_236017068.1
KEYWORDS    RefSeq.
SOURCE      Siminovitchia
  ORGANISM  Siminovitchia
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 124)
  AUTHORS   Campbell,E.A., Muzzin,O., Chlenov,M., Sun,J.L., Olson,C.A.,
            Weinman,O., Trester-Zedlitz,M.L. and Darst,S.A.
  TITLE     Structure of the bacterial RNA polymerase promoter specificity
            sigma subunit
  JOURNAL   Mol Cell 9 (3), 527-539 (2002)
   PUBMED   11931761
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019886.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08281.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Siminovitchia"
                     /db_xref="taxon:2837510"
     Protein         1..124
                     /product="sigma factor-like helix-turn-helix DNA-binding
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0016987 - sigma factor activity [Evidence
                     IEA]"
                     /GO_process="GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=14147
     Region          <1..122
                     /region_name="PRK06930"
                     /note="positive control sigma-like factor; Validated"
                     /db_xref="CDD:180757"
ORIGIN      
        1 middmdfaie wletgwqpgt yrgvdkktiy qirslecmds ipditeqled aterkskmtr
       61 eekviladil ssfslrerqc yilhvahgms waaishelgi skstvqayik rarnkvgkri
      121 nevg
//
LOCUS       WP_236017157             151 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: YkyB family protein [Siminovitchia].
ACCESSION   WP_236017157
VERSION     WP_236017157.1
KEYWORDS    RefSeq.
SOURCE      Siminovitchia
  ORGANISM  Siminovitchia
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025541.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14177.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Siminovitchia"
                     /db_xref="taxon:2837510"
     Protein         1..151
                     /product="YkyB family protein"
                     /calculated_mol_wt=17442
     Region          12..127
                     /region_name="YkyB"
                     /note="YkyB-like protein; pfam14177"
                     /db_xref="CDD:464098"
ORIGIN      
        1 mdsnkthplp ptienlsqai ftvnrhakta inpkflyklk ktaidkmiqe kkatktglhf
       61 srnprfsqqq sdvlvkcgdy tfhipptked fqrlphlghl dqhsrnpktr mplntakkll
      121 qeytglketk qnphrperkk ptfkklgdsf f
//
LOCUS       WP_236017189             345 aa            linear   BCT 02-MAR-2025
DEFINITION  protein rep [Siminovitchia thermophila].
ACCESSION   WP_236017189
VERSION     WP_236017189.1
KEYWORDS    RefSeq.
SOURCE      Siminovitchia thermophila
  ORGANISM  Siminovitchia thermophila
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Siminovitchia.
REFERENCE   1  (residues 1 to 345)
  AUTHORS   Marsin,S. and Forterre,P.
  TITLE     A rolling circle replication initiator protein with a
            nucleotidyl-transferase activity encoded by the plasmid pGT5 from
            the hyperthermophilic archaeon Pyrococcus abyssi
  JOURNAL   Mol Microbiol 27 (6), 1183-1192 (1998)
   PUBMED   9570403
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013603.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01446.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Siminovitchia thermophila"
                     /db_xref="taxon:1245522"
     Protein         1..345
                     /product="protein rep"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /calculated_mol_wt=40516
     Region          72..342
                     /region_name="Rep_1"
                     /note="Replication protein; cl02412"
                     /db_xref="CDD:470569"
ORIGIN      
        1 mhlyphdsmd mlsksnkils dkdgqgkerd wkgkkkrsll maehheiael gkkaermyec
       61 gsflsfklkd erlklyqayf ckarlcpmcn wrrslkiafq nkkiiqavne renvkwvflt
      121 ltvrnvggee lkdtmdlmtk awnrfagyvk fkrsikgyfr alevtrnwdk esewygtyhp
      181 hfhvllavpn dyfgrnyikq aewtsmwqra mkldyipivh vakvkpkkes pdfiemeqei
      241 kktiaeqnai fevskypmkd tdvirgnkvt penvqtvkdl dralaykrli syggllkkih
      301 kelnlsdsed gdlihiddes deiangavdi maywhvglnn ymirr
//
LOCUS       WP_236017271             457 aa            linear   BCT 02-MAR-2025
DEFINITION  M28 family peptidase [Roseivirga sp. E12].
ACCESSION   WP_236017271
VERSION     WP_236017271.1
KEYWORDS    RefSeq.
SOURCE      Roseivirga sp. E12
  ORGANISM  Roseivirga sp. E12
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Roseivirgaceae; Roseivirga.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016289.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04389.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Roseivirga sp. E12"
                     /db_xref="taxon:2819237"
     Protein         1..457
                     /product="M28 family peptidase"
                     /calculated_mol_wt=50739
     Region          26..375
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     Region          <326..>445
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
ORIGIN      
        1 mkkvfktlgl fglmmafqtv saqeappqid triyeiinat sadrieadir rlagfgtrnt
       61 fsdtvsetrg igaarrwiks efekisqecg gclevfyqkd fvektegsrv phsawivnvv
      121 avlrgtdypd syvmmsgdid srasntmnye idapgandna sgmagtieaa rvmskykfkh
      181 svafvglsge eqglfggrgl akyaqennwk migilnndmi gniegvdgvi dnrtfrifse
      241 ptpanetdrq rgarrfagge vdgisrqlar fihgqvktym pemnpmmiyr ldrfgrgghh
      301 rpfndlgfag vrimeaheny nrqhqniree ngikygdvie gvnfpyakkl tavnaislag
      361 lawappapte vriggavrps ttlqwaasdd pdiagyklyw rlttsptwdn fkfvsgvnef
      421 tlegividny yfgvsavgkd gnespvvfpa lqirrrr
//
LOCUS       WP_236017337              75 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6728 family protein [Roseivirga sp. E12].
ACCESSION   WP_236017337
VERSION     WP_236017337.1
KEYWORDS    RefSeq.
SOURCE      Roseivirga sp. E12
  ORGANISM  Roseivirga sp. E12
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Roseivirgaceae; Roseivirga.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042817.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20498.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Roseivirga sp. E12"
                     /db_xref="taxon:2819237"
     Protein         1..75
                     /product="DUF6728 family protein"
                     /calculated_mol_wt=8547
     Region          20..73
                     /region_name="DUF6728"
                     /note="Family of unknown function (DUF6728); pfam20498"
                     /db_xref="CDD:466647"
ORIGIN      
        1 mseekkntee nervklsake afdfgpllgy ffrkkdpnrp tnfnlkmmhg vnkisiimfl
       61 ialtviiara isrsm
//
LOCUS       WP_236017348             316 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-dependent oxidoreductase [Roseivirga sp. E12].
ACCESSION   WP_236017348
VERSION     WP_236017348.1
KEYWORDS    RefSeq.
SOURCE      Roseivirga sp. E12
  ORGANISM  Roseivirga sp. E12
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Roseivirgaceae; Roseivirga.
REFERENCE   1  (residues 1 to 316)
  AUTHORS   Dengler,U., Niefind,K., Kiess,M. and Schomburg,D.
  TITLE     Crystal structure of a ternary complex of D-2-hydroxyisocaproate
            dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate
            at 1.9 A resolution
  JOURNAL   J Mol Biol 267 (3), 640-660 (1997)
   PUBMED   9126843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02826.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Roseivirga sp. E12"
                     /db_xref="taxon:2819237"
     Protein         1..316
                     /product="NAD(P)-dependent oxidoreductase"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
                     /calculated_mol_wt=35849
     Region          4..306
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(148..150,152,170..172,200..201,228)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:240656"
ORIGIN      
        1 mskkclivde mhesiqdlls qigiepvylp kasrseildk ihdfegllir skttvdqelv
       61 dkavklefig ragagldkid veyvenrdie ilnapegnrd alaehavaml lnllnninra
      121 drevrnwiwd regnrgvels dktvgiigyg hmgqafvqrl rafdcrvlvy dkyrkgfgtk
      181 nveevslekm fakadilslh vplteetrgw inadffeqfh kniyllntar geivptkdll
      241 alldsgkllg aaldvlekek fdqlskdqkv lfenlftrkn vvlsphvggw tfasfkrine
      301 vlvgkiathy ridwna
//
LOCUS       WP_236017363             327 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: helix-turn-helix domain-containing protein
            [Enterococcus].
ACCESSION   WP_236017363
VERSION     WP_236017363.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus
  ORGANISM  Enterococcus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae.
REFERENCE   1  (residues 1 to 327)
  AUTHORS   Kreikemeyer,B., Beckert,S., Braun-Kiewnick,A. and Podbielski,A.
  TITLE     Group A streptococcal RofA-type global regulators exhibit a
            strain-specific genomic presence and regulation pattern
  JOURNAL   Microbiology (Reading) 148 (Pt 5), 1501-1511 (2002)
   PUBMED   11988525
REFERENCE   2  (residues 1 to 327)
  AUTHORS   McIver,K.S. and Myles,R.L.
  TITLE     Two DNA-binding domains of Mga are required for virulence gene
            activation in the group A streptococcus
  JOURNAL   Mol Microbiol 43 (6), 1591-1601 (2002)
   PUBMED   11952907
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016901.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05043.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Enterococcus"
                     /db_xref="taxon:1350"
     Protein         1..327
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=39330
     Region          30..>230
                     /region_name="BglG"
                     /note="Transcriptional antiterminator [Transcription];
                     COG3711"
                     /db_xref="CDD:442925"
     Region          80..165
                     /region_name="HTH_CRP"
                     /note="helix_turn_helix, cAMP Regulatory protein
                     C-terminus; DNA binding domain of prokaryotic regulatory
                     proteins belonging to the catabolite activator protein
                     family; cl46859"
                     /db_xref="CDD:481199"
ORIGIN      
        1 mfeefidine rqvyqflnyc yerdeklyvv kdialdlnyt lakmnsviqq aesfcerype
       61 yklsflsenk mikvefssqf llskvysill egtigyilld slykgtyqsl enlsqknyis
      121 lrtiqrklre lntilknyhl scslkkgnpi egeeyriryf fhlmywqsfd enhsdilssi
      181 knkrqllekf akhapytrsi drkkwisllr islqrmkqgh pityvpeemn kfvhplitke
      241 efthyilepf feanfwsmnh itpteqayly fmfgvmntyl eedlldapdk vqeswgwies
      301 sivenfekns rfllqlqkki iylsiwq
//
LOCUS       WP_236017370             449 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Enterococcus lactis].
ACCESSION   WP_236017370
VERSION     WP_236017370.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus lactis
  ORGANISM  Enterococcus lactis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Enterococcus lactis"
                     /db_xref="taxon:357441"
     Protein         1..449
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=49293
     Region          15..405
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(20..21,24..25,28,59,109..110,112..114,117,137,
                     140..141,144,267,270..271,274..276,279,307,311,363..364,
                     368,372,388,391..392,395..396,399)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 msqtkkgwil laiylatfmt avestivita anaiansfgr eipiallfss ylfssalstp
       61 vfsrladqyg kkpifiigll lfmtgtflcg isqsffilvf frmvqgigag gimpitfsli
      121 gdlfdyesrg rimglnnsaw gitslaapll ggllvenfsw hwvffinipf glltililll
      181 fydeekrpsv sfsyqelgqy lflvtslfll lvgiqiipdh filgggvflf gilvsfills
      241 yenkvkepvl pvetlrssdf llfnlvtflm ngammgfqvy lplwiqtqls lspslgglal
      301 lpssvffitg smiavplgkh fgtkrlltfc mgvnglvfli lgflpqmtpy fvllilasfs
      361 gfgtgttvtt svlsaqvlat dknistvsgf itlcrnlgqs fmitffgivf qlfskdtfsi
      421 dgyqgvffsa lfvvllsilm vllkrdsle
//
LOCUS       WP_236017435             620 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: PRD domain-containing protein, partial
            [Enterococcus].
ACCESSION   WP_236017435
VERSION     WP_236017435.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus
  ORGANISM  Enterococcus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae.
REFERENCE   1  (residues 1 to 620)
  AUTHORS   Graille,M., Zhou,C.Z., Receveur-Brechot,V., Collinet,B.,
            Declerck,N. and van Tilbeurgh,H.
  TITLE     Activation of the LicT transcriptional antiterminator involves a
            domain swing/lock mechanism provoking massive structural changes
  JOURNAL   J Biol Chem 280 (15), 14780-14789 (2005)
   PUBMED   15699035
REFERENCE   2  (residues 1 to 620)
  AUTHORS   Declerck,N., Dutartre,H., Receveur,V., Dubois,V., Royer,C.,
            Aymerich,S. and van Tilbeurgh,H.
  TITLE     Dimer stabilization upon activation of the transcriptional
            antiterminator LicT
  JOURNAL   J Mol Biol 314 (4), 671-681 (2001)
   PUBMED   11733988
REFERENCE   3  (residues 1 to 620)
  AUTHORS   van Tilbeurgh,H. and Declerck,N.
  TITLE     Structural insights into the regulation of bacterial signalling
            proteins containing PRDs
  JOURNAL   Curr Opin Struct Biol 11 (6), 685-693 (2001)
   PUBMED   11751049
REFERENCE   4  (residues 1 to 620)
  AUTHORS   van Tilbeurgh,H., Le Coq,D. and Declerck,N.
  TITLE     Crystal structure of an activated form of the PTS regulation domain
            from the LicT transcriptional antiterminator
  JOURNAL   EMBO J 20 (14), 3789-3799 (2001)
   PUBMED   11447120
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013070.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00874.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Enterococcus"
                     /db_xref="taxon:1350"
     Protein         <1..620
                     /product="PRD domain-containing protein"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
     Region          <1..604
                     /region_name="LevR"
                     /note="Transcriptional regulatory protein LevR, contains
                     PRD, AAA+ and EIIA domains [Transcription]; COG3933"
                     /db_xref="CDD:443134"
ORIGIN      
        1 ffitessild kelqvsyqmi dfllnsdleg nvgkikniik yacgnayvhq knsqtifvrl
       61 kdlpleynlk fkeqfskpkk kmsdrtylpn ttqqihlesk etqllrnffd evvsefkkvq
      121 kkesqpqefi edtvsrvtqm mdefifqgty ekeeslysvl tyhirqtldm myknygfeqd
      181 gnrvvslasy lylkdntdil dsdygwqeqk nelmefldsf letpfwyakk llsylsqqld
      241 qrlldedivf vtfyfyslqi sdlpndvkci vpahgystas slanvvnrml gknvfqaydm
      301 pinitldkve tkiiryindy stdsglillv dmgsfnqlge rlsnhikspl viidnvstpl
      361 vlevgehivn gnsvtevyea itvenriqkq liipevnkkk aiitccytgi gsatqiqeil
      421 qkclgdsake ltilpydykk laenkmyetp fqlydvlmiv gtenpkinqv pyigldqlin
      481 geavsefael lheqvdidse afksqlifnf sinkivenlt ildamkvlrl vqkavkelek
      541 lmgiefsnnq lfllymhccs mierilrkes vdeqadikey iqkeghnmel ihqafqevek
      601 eytielplle lrllndivkd
//
LOCUS       WP_236017477             971 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 N-terminal domain-containing protein
            [Roseivirga sp. E12].
ACCESSION   WP_236017477
VERSION     WP_236017477.1
KEYWORDS    RefSeq.
SOURCE      Roseivirga sp. E12
  ORGANISM  Roseivirga sp. E12
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Roseivirgaceae; Roseivirga.
REFERENCE   1  (residues 1 to 971)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00933.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..971
                     /organism="Roseivirga sp. E12"
                     /db_xref="taxon:2819237"
     Protein         1..971
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=109912
     Region          43..501
                     /region_name="BglX"
                     /note="Periplasmic beta-glucosidase and related
                     glycosidases [Carbohydrate transport and metabolism];
                     COG1472"
                     /db_xref="CDD:441081"
     Region          571..967
                     /region_name="AmpC"
                     /note="CubicO group peptidase, beta-lactamase class C
                     family [Defense mechanisms]; COG1680"
                     /db_xref="CDD:441286"
ORIGIN      
        1 mkkvivmvlm flvswgplwa qkiyqkidtq aqeewvdstf nsltpeerig qlfmvaaysn
       61 rdekhykeid klitdynigg liffqggpyr qaklnnryqs kskiplaiam daewgigmrl
      121 dsvldfprqm tlgaiqdnkw iyemgkevan qfhvlnmhin fapvvdvnvn pnnpvigyrs
      181 fgenkfsvse kgiaymkgmq dhgvmanakh fpghgdtdtd shyslpvikh svermtetel
      241 ypfkqlmkds lmsimvahlq vpsyddrenm pttlsekvvt dllkkelefs glvftdamnm
      301 qgvakyynpg eadvkalqag ndiilfpldv pkaikqvkka lkkerldqas idervkkilr
      361 akywfglnel eminttnltk rinndyaqll nrilyqkait vvdnqdkllp iidlgegtft
      421 sislgegdpt efrrmldkya kfnhstsdsl dveafgqddl vvisyhgitn spknqhgvnd
      481 ddlafieslq aktnvivval gnayslqyfe gikniictye dneitqnlap qiifgalkae
      541 gklpisageh fkagtgietl vtsrlsygmp aevgmnidsl rkidaiieea irdkatpgaq
      601 vivarkgkvv yqknfghqty aeekpvedht iydvasitkv aattqvimkl yeekrldink
      661 tlgyylkdlr gtnkdsllir dvlthqaglk pyipfwektv dkgelkaeyf sdasgpnhdf
      721 rfqeddlppa ladsvwqwti dsdlrdlpkk kkrydylysd lgytlmyhvi seiiqepvet
      781 yiqrefygpl glsrtmylpl ekgygkdiap sevddyfrnt ivcgsvhdqn atlmggiagh
      841 aglfssandl ailmqmnmqm geyaekkyfq nwtipiftsa qymenrrglg wdkpitgtde
      901 gptskyssas tfghtgftga avwadpaeel vfvflcnrty pesdnfklle dnvrtrihdl
      961 lyesifepka d
//
LOCUS       WP_236017528             524 aa            linear   BCT 02-MAR-2025
DEFINITION  dienelactone hydrolase family protein [Roseivirga sp. E12].
ACCESSION   WP_236017528
VERSION     WP_236017528.1
KEYWORDS    RefSeq.
SOURCE      Roseivirga sp. E12
  ORGANISM  Roseivirga sp. E12
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Roseivirgaceae; Roseivirga.
REFERENCE   1  (residues 1 to 524)
  AUTHORS   Pathak,D. and Ollis,D.
  TITLE     Refined structure of dienelactone hydrolase at 1.8 A
  JOURNAL   J Mol Biol 214 (2), 497-525 (1990)
   PUBMED   2380986
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013866.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01738.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Roseivirga sp. E12"
                     /db_xref="taxon:2819237"
     Protein         1..524
                     /product="dienelactone hydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=60044
     Region          23..378
                     /region_name="COG4188"
                     /note="Predicted dienelactone hydrolase [General function
                     prediction only]"
                     /db_xref="CDD:443342"
     Region          411..>519
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          <471..522
                     /region_name="TadD"
                     /note="Flp pilus assembly protein TadD, contains TPR
                     repeats [Intracellular trafficking, secretion, and
                     vesicular transport, Extracellular structures]; COG5010"
                     /db_xref="CDD:444034"
     Region          478..508
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mdnrifqtit npvimrltil pililfqanl ivaqtslaei dlekgkynvg fkhyttsdst
       61 rtysraydyt nkevdrpipv smwypseqnl ddlepfqvld yleilkeeee wehlpneqil
      121 nwfyyantpa nqkhlvektt ahhnsefskg rfpvviyaps yqassienfs lceylashgf
      181 vvisspsrgt ktrwfsinna memetqardv eflmkearki piadndkiai mgfsfgglsn
      241 iivqnrndkv kaivsldgte ryqygilnqs psfdaqnidv pymhmaqkdi petvliedki
      301 daelntrfql fdsitnsrth qlkfhnlths yfstlgvlfa drdkrqdksd ieimksyklv
      361 tlytlnflns alnqldkast fiendpssng iandlitqki kqssiedift frdfndlasg
      421 qnyenlsqfy dsiikkhpsf kiaegnlntl glqlvfnpnt asqgvnvfll atrlypnsan
      481 lydslaegyl fngieekaie sfekslelnp qnqnaisrlr qlrk
//
LOCUS       WP_236017570             253 aa            linear   BCT 02-MAR-2025
DEFINITION  PA14 domain-containing protein, partial [Roseivirga sp. E12].
ACCESSION   WP_236017570
VERSION     WP_236017570.1
KEYWORDS    RefSeq.
SOURCE      Roseivirga sp. E12
  ORGANISM  Roseivirga sp. E12
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Roseivirgaceae; Roseivirga.
REFERENCE   1  (residues 1 to 253)
  AUTHORS   Rigden,D.J., Mello,L.V. and Galperin,M.Y.
  TITLE     The PA14 domain, a conserved all-beta domain in bacterial toxins,
            enzymes, adhesins and signaling molecules
  JOURNAL   Trends Biochem Sci 29 (7), 335-339 (2004)
   PUBMED   15236739
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07691.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Roseivirga sp. E12"
                     /db_xref="taxon:2819237"
     Protein         1..>253
                     /product="PA14 domain-containing protein"
     Region          <137..217
                     /region_name="PA14"
                     /note="PA14 domain; cl08459"
                     /db_xref="CDD:471833"
ORIGIN      
        1 mpdtsyrdis iyggfpyhpv saslierhva hmispsglle anmmacggti ggtagtddfd
       61 gdgvcnnidl dddndgildt eehcivagml tyefynllps gstvdniptt gannialtan
      121 fdvsalqqan spgdiidfsi rftgdilltn sdtytfylgs ddgsklfidd veivdhdfph
      181 syseksasva ltagyhkikv eyfensgnrq ltleyssvss ptkipvpfsi mrgqsfncst
      241 sgignnnqfn lda
//
LOCUS       WP_236017626             214 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Methylobacterium ajmalii].
ACCESSION   WP_236017626
VERSION     WP_236017626.1
KEYWORDS    RefSeq.
SOURCE      Methylobacterium ajmalii
  ORGANISM  Methylobacterium ajmalii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
REFERENCE   1  (residues 1 to 214)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Methylobacterium ajmalii"
                     /db_xref="taxon:2738439"
     Protein         1..>214
                     /product="AMP-binding protein"
     Region          19..>128
                     /region_name="MenE/FadK"
                     /note="O-succinylbenzoic acid-CoA ligase MenE or related
                     acyl-CoA synthetase (AMP-forming) [Lipid transport and
                     metabolism]; COG0318"
                     /db_xref="CDD:440087"
ORIGIN      
        1 mpaampvpas asapmglcal laavadrhpa riafvdqask pdwcgrpaia wtfaaareiv
       61 arlaeglqql rlpprspvgl cmagmaeahl aflaieqagh vpcllpvtwd edrllqaves
      121 aqilailtqg vlgaerpaet mcrvamryfp lrfvaafgph vpdgvlsldq vvldhrgdaa
      181 algtasaagl vtfalpgapp agpagpppep agap
//
LOCUS       WP_236017628              91 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein, partial [Methylobacterium
            ajmalii].
ACCESSION   WP_236017628
VERSION     WP_236017628.1
KEYWORDS    RefSeq.
SOURCE      Methylobacterium ajmalii
  ORGANISM  Methylobacterium ajmalii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
REFERENCE   1  (residues 1 to 91)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Methylobacterium ajmalii"
                     /db_xref="taxon:2738439"
     Protein         <1..91
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
     Region          <1..75
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
ORIGIN      
        1 efgngtaift rdgdaarefa hqiqvgmvgi nvpipvpmaf hsfggwkasl fgdhhmhgpe
       61 gvrfytrlkt ittrwptgir agaefvmptm k
//
LOCUS       WP_236017630             247 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein, partial [Methylobacterium
            ajmalii].
ACCESSION   WP_236017630
VERSION     WP_236017630.1
KEYWORDS    RefSeq.
SOURCE      Methylobacterium ajmalii
  ORGANISM  Methylobacterium ajmalii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
REFERENCE   1  (residues 1 to 247)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Methylobacterium ajmalii"
                     /db_xref="taxon:2738439"
     Protein         <1..>247
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
     Region          <1..247
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     Site            order(2,99,130,133)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143395"
ORIGIN      
        1 fnfpamvpmw mfpvalacgn cfvlkpserd psaalvmaew lkeaglpdgv fsvvqgdkea
       61 vdallhhpdv savsfvgstp iakyiyetaa rtgkraqclg gaknhmvvmp dadmdqavda
      121 lmgaaygsag ercmaisvav pigeetadrl meklvpkvra lkvgpgtdpe aemgplvtaq
      181 hrdkvkgyid rgvqegaelv vdgrtlslqg yengyfvggt lfdrvtpemt iykeeifgpv
      241 lavarap
//
LOCUS       WP_236017671              57 aa            linear   BCT 02-MAR-2025
DEFINITION  1-deoxy-D-xylulose-5-phosphate synthase N-terminal
            domain-containing protein, partial [Methylobacterium ajmalii].
ACCESSION   WP_236017671
VERSION     WP_236017671.1
KEYWORDS    RefSeq.
SOURCE      Methylobacterium ajmalii
  ORGANISM  Methylobacterium ajmalii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
REFERENCE   1  (residues 1 to 57)
  AUTHORS   Sprenger,G.A., Schorken,U., Wiegert,T., Grolle,S., de Graaf,A.A.,
            Taylor,S.V., Begley,T.P., Bringer-Meyer,S. and Sahm,H.
  TITLE     Identification of a thiamin-dependent synthase in Escherichia coli
            required for the formation of the 1-deoxy-D-xylulose 5-phosphate
            precursor to isoprenoids, thiamin, and pyridoxol
  JOURNAL   Proc Natl Acad Sci U S A 94 (24), 12857-12862 (1997)
   PUBMED   9371765
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024688.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13292.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..57
                     /organism="Methylobacterium ajmalii"
                     /db_xref="taxon:2738439"
     Protein         1..>57
                     /product="1-deoxy-D-xylulose-5-phosphate synthase
                     N-terminal domain-containing protein"
                     /GO_function="GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA]"
                     /GO_process="GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
     Region          10..>57
                     /region_name="Dxs"
                     /note="Deoxyxylulose-5-phosphate synthase [Coenzyme
                     transport and metabolism, Lipid transport and metabolism];
                     COG1154"
                     /db_xref="CDD:440768"
ORIGIN      
        1 mapvsplnlp lldrvripad lrqlpesdla qlaaelraet idavsvtggh lgaglgv
//
LOCUS       WP_236017723             233 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Alicyclobacillus suci].
ACCESSION   WP_236017723
VERSION     WP_236017723.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus suci
  ORGANISM  Alicyclobacillus suci
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 233)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07883.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Alicyclobacillus suci"
                     /db_xref="taxon:2816080"
     Protein         1..233
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=26002
     Region          <14..72
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     Region          108..224
                     /region_name="cupin_GDO-like_N"
                     /note="gentisate 1,2-dioxygenase, 1-hydroxy-2-naphthoate
                     dioxygenase, and salicylate 1,2-dioxygenase, N-terminal
                     cupin domain; cd02216"
                     /db_xref="CDD:380346"
     Site            order(110,129,133,144,146,150,152,198,200,210,212,214)
                     /site_type="active"
                     /db_xref="CDD:380346"
ORIGIN      
        1 magdeittkp natselyyvi sgeghtevgg erldwragdf ftlpaksvsr hfarqdatfy
       61 yvhdnpilsy lgvtaaeprf rptlfagdvv reelrkvmsa pgatnknrvs vllnnaafdq
      121 tltithtlwa mfgivsagev qyphshksva ldfvvdckpg vytllgehid rktkqiidpi
      181 rvdwepgkaf vtppgmwhsh hnesnepayi lpvqdaglqt ylrtldiqft frv
//
LOCUS       WP_236017885             454 aa            linear   BCT 02-MAR-2025
DEFINITION  multicopper oxidase domain-containing protein [Alicyclobacillus
            suci].
ACCESSION   WP_236017885
VERSION     WP_236017885.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus suci
  ORGANISM  Alicyclobacillus suci
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 454)
  AUTHORS   Page,C.C., Moser,C.C., Chen,X. and Dutton,P.L.
  TITLE     Natural engineering principles of electron tunnelling in biological
            oxidation-reduction
  JOURNAL   Nature 402 (6757), 47-52 (1999)
   PUBMED   10573417
REFERENCE   2  (residues 1 to 454)
  AUTHORS   Grossmann,J.G., Ingledew,W.J., Harvey,I., Strange,R.W. and
            Hasnain,S.S.
  TITLE     X-ray absorption studies and homology modeling define the
            structural features that specify the nature of the copper site in
            rusticyanin
  JOURNAL   Biochemistry 34 (26), 8406-8414 (1995)
   PUBMED   7599131
REFERENCE   3  (residues 1 to 454)
  AUTHORS   Messerschmidt,A., Ladenstein,R., Huber,R., Bolognesi,M.,
            Avigliano,L., Petruzzelli,R., Rossi,A. and Finazzi-Agro,A.
  TITLE     Refined crystal structure of ascorbate oxidase at 1.9 A resolution
  JOURNAL   J Mol Biol 224 (1), 179-205 (1992)
   PUBMED   1548698
REFERENCE   4  (residues 1 to 454)
  AUTHORS   Messerschmidt,A. and Huber,R.
  TITLE     The blue oxidases, ascorbate oxidase, laccase and ceruloplasmin.
            Modelling and structural relationships
  JOURNAL   Eur J Biochem 187 (2), 341-352 (1990)
   PUBMED   2404764
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019352.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07732.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Alicyclobacillus suci"
                     /db_xref="taxon:2816080"
     Protein         1..454
                     /product="multicopper oxidase domain-containing protein"
                     /GO_function="GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=49019
     Region          59..134
                     /region_name="PetE"
                     /note="Plastocyanin [Energy production and conversion];
                     COG3794"
                     /db_xref="CDD:443008"
     Region          189..454
                     /region_name="SufI"
                     /note="Multicopper oxidase with three cupredoxin domains
                     (includes cell division protein FtsP and spore coat
                     protein CotA) [Cell cycle control, cell division,
                     chromosome partitioning, Inorganic ion transport and
                     metabolism, Cell wall/membrane/envelope biogenesis;
                     COG2132"
                     /db_xref="CDD:441735"
ORIGIN      
        1 mirgrltsil rhagicgaal llfvgttgcq tsgssantas ptatttnakh vtvqlqgsaf
       61 sptqihvtpg ttvtwkndde vthtvtsgqn gkpdgmfdsk dltpgksfsy tfkksgtypy
      121 ycvyhpnmvg tvivssssat ttsgggdmsg mgsmdsnaas ttsargaiap lgtgssgepk
      181 laddmrllpy kmengykvfh ltaqpvywev kpgqkveawa yngtvpgpei rvdqgdkvki
      241 evtnkltegt tvhwhgldvp fkqdgsggis qpdikpgqtw tytftvnapp gtymyhahpm
      301 kdmlkqeqmg lfgafivepk gtgwkqvhpg yqdeytlivn dspqfgytin glsypatpvm
      361 pvklgdkvlv hlinigsmdh pmhlhgfhfq linqdgwpls spqwldtint apgstydlaf
      421 tanqkgkwlf hchitehvtd genmsgmvtm fnvq
//
LOCUS       WP_236018216             273 aa            linear   BCT 02-MAR-2025
DEFINITION  G1 family glutamic endopeptidase [Alicyclobacillus suci].
ACCESSION   WP_236018216
VERSION     WP_236018216.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus suci
  ORGANISM  Alicyclobacillus suci
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 273)
  AUTHORS   Jensen,K., Ostergaard,P.R., Wilting,R. and Lassen,S.F.
  TITLE     Identification and characterization of a bacterial glutamic
            peptidase
  JOURNAL   BMC Biochem 11, 47 (2010)
   PUBMED   21122090
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01828.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Alicyclobacillus suci"
                     /db_xref="taxon:2816080"
     Protein         1..273
                     /product="G1 family glutamic endopeptidase"
                     /GO_function="GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=29172
     Region          36..263
                     /region_name="Peptidase_G1"
                     /note="Peptidases of the G1 family, including
                     scytalidoglutamic peptidase and aspergillopepsin; cd13426"
                     /db_xref="CDD:240449"
     Site            order(38..39,43,100,102,107,115,119,132,134,200,202..203,
                     239)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:240449"
     Site            order(102,115,134,200,203)
                     /site_type="active"
                     /db_xref="CDD:240449"
ORIGIN      
        1 manlkhvphf trkhrrtprp mdasatiqaa lfgwsssnws gyaiasdtng tyqsvsaswq
       61 vpavqatpts papsgwgwlg rlfswlfggg gqssmdaysa twigidgfnn snliqtgtaq
      121 nivngkpqyy awweilpvae teidpvqypv sagdmmtaai akqadgtwqi qlanqtrgwt
      181 flkngiqytg pqtsvewiee apevngsiti lanygqvmfs nitvnganpn lqiseagvlv
      241 qgnqqlstps apgpngndfn iaygatqpsa pst
//
LOCUS       WP_236018440             745 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: glycosyltransferase [Hymenobacter].
ACCESSION   WP_236018440
VERSION     WP_236018440.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter
  ORGANISM  Hymenobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae.
REFERENCE   1  (residues 1 to 745)
  AUTHORS   Zhang,Y.L., Arakawa,E. and Leung,K.Y.
  TITLE     Novel Aeromonas hydrophila PPD134/91 genes involved in O-antigen
            and capsule biosynthesis
  JOURNAL   Infect Immun 70 (5), 2326-2335 (2002)
   PUBMED   11953367
  REMARK    Erratum:[Infect Immun 2002 Jun;70(6):3308]
REFERENCE   2  (residues 1 to 745)
  AUTHORS   Swartley,J.S., Liu,L.J., Miller,Y.K., Martin,L.E., Edupuganti,S.
            and Stephens,D.S.
  TITLE     Characterization of the gene cassette required for biosynthesis of
            the (alpha1-->6)-linked N-acetyl-D-mannosamine-1-phosphate capsule
            of serogroup A Neisseria meningitidis
  JOURNAL   J Bacteriol 180 (6), 1533-1539 (1998)
   PUBMED   9515923
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025025.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13641.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Hymenobacter"
                     /db_xref="taxon:89966"
     Protein         1..745
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=82694
     Region          35..259
                     /region_name="CESA_CelA_like"
                     /note="CESA_CelA_like are involved in the elongation of
                     the glucan chain of cellulose; cd06421"
                     /db_xref="CDD:133043"
     Site            120..122
                     /site_type="active"
                     /note="DXD motif [active]"
                     /db_xref="CDD:133043"
     Region          <201..359
                     /region_name="PLN02638"
                     /note="cellulose synthase A (UDP-forming), catalytic
                     subunit"
                     /db_xref="CDD:215343"
     Region          458..>665
                     /region_name="Glyco_hydro_26"
                     /note="Glycosyl hydrolase family 26; cl21700"
                     /db_xref="CDD:473934"
ORIGIN      
        1 mvvsltykvl wilhewfhyv qisapvppay ptrlrtvdml ttacpgepha miigtleamq
       61 avryphtsyl cdegddpvlr aacarlgvvh vtrllktdak agninnalrq atgelcvvld
      121 pdhaptpdfl dhvtpyfedd svgyvqvvqa ygnqadslva rgaaeqtyhf ygplmmgmna
      181 ydtvqaigan ctfrraalds igghaaglte dmhtamrlha agwqsayvpq ivsrglvpss
      241 laafyaqqlk wsrgafdllf rvypklfgrf swaqrlhyll lplyflsgai tlidfilpil
      301 clylsqlpli trlidlaqyt lpflivslli hqqaqrwlre psergmhwag nflqvstwwv
      361 ytlgllyaia gvrvpyiptp kegrqsnewg laipnlllia lllgacvygr saapgyytnl
      421 mvylalfnvl lltgavglgl hevvhwlrqr lttqplrwft lavyqglari gtalllgvqr
      481 yspgaallll vafglisylr hdqlsrqpsg wlltgansvh lgwaadrpgs llsyparhww
      541 qftasatpya iaalpfaate pipeatrqla rhqvpllswa vrsadtwqpd ywlplarqva
      601 slpspvmlrp nlsaptasay rrawqhmvrs fkqahvtnav wvwtpeatds lfqrfpgsay
      661 tdwlacrlqg qgdmasyaal rplmaqdill hdlpvlllap tpaanptqag qrlsqlypel
      721 kaivfaspqr lmpltahtrp saacq
//
LOCUS       WP_236018454             177 aa            linear   BCT 02-MAR-2025
DEFINITION  antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein
            [Hymenobacter sp. BT559].
ACCESSION   WP_236018454
VERSION     WP_236018454.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter sp. BT559
  ORGANISM  Hymenobacter sp. BT559
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 177)
  AUTHORS   Zhang,S.P., Feng,H.Z., Wang,Q., Kempher,M.L., Quan,S.W., Tao,X.,
            Niu,S., Wang,Y., Feng,H.Y. and He,Y.X.
  TITLE     Bacterial type II toxin-antitoxin systems acting through
            post-translational modifications
  JOURNAL   Comput Struct Biotechnol J 19, 86-93 (2020)
   PUBMED   33384857
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 177)
  AUTHORS   Freire,D.M., Gutierrez,C., Garza-Garcia,A., Grabowska,A.D.,
            Sala,A.J., Ariyachaokun,K., Panikova,T., Beckham,K.S.H., Colom,A.,
            Pogenberg,V., Cianci,M., Tuukkanen,A., Boudehen,Y.M., Peixoto,A.,
            Botella,L., Svergun,D.I., Schnappinger,D., Schneider,T.R.,
            Genevaux,P., de Carvalho,L.P.S., Wilmanns,M., Parret,A.H.A. and
            Neyrolles,O.
  TITLE     An NAD+ Phosphorylase Toxin Triggers Mycobacterium tuberculosis
            Cell Death
  JOURNAL   Mol Cell 73 (6), 1282-1291 (2019)
   PUBMED   30792174
REFERENCE   3  (residues 1 to 177)
  AUTHORS   Piscotta,F.J., Jeffrey,P.D. and Link,A.J.
  TITLE     ParST is a widespread toxin-antitoxin module that targets
            nucleotide metabolism
  JOURNAL   Proc Natl Acad Sci U S A 116 (3), 826-834 (2019)
   PUBMED   30598453
REFERENCE   4  (residues 1 to 177)
  AUTHORS   Skjerning,R.B., Senissar,M., Winther,K.S., Gerdes,K. and
            Brodersen,D.E.
  TITLE     The RES domain toxins of RES-Xre toxin-antitoxin modules induce
            cell stasis by degrading NAD+
  JOURNAL   Mol Microbiol 111 (1), 221-236 (2019)
   PUBMED   30315706
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021255.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09722.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Hymenobacter sp. BT559"
                     /db_xref="taxon:2795729"
     Protein         1..177
                     /product="antitoxin Xre/MbcA/ParS toxin-binding
                     domain-containing protein"
                     /calculated_mol_wt=19333
     Region          38..177
                     /region_name="COG5642"
                     /note="Uncharacterized conserved protein, DUF2384 family
                     [Function unknown]"
                     /db_xref="CDD:444366"
ORIGIN      
        1 mtktmqhigg tsasigghag sqpdnriaat pavretvtsi piatatgvrf veqvrtgwpl
       61 eagqqhvrql aakldmtlhe malvlataer tfarqlsakp sektlaftka qaerllllqa
      121 ltnhgvevfe dqgkfnrwlr rplhllqqqs plqlldtvtg frvvdqllgr iaygvys
//
LOCUS       WP_236018606            1089 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: glycoside hydrolase family 2 TIM barrel-domain
            containing protein [Hymenobacter].
ACCESSION   WP_236018606
VERSION     WP_236018606.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter
  ORGANISM  Hymenobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae.
REFERENCE   1  (residues 1 to 1089)
  AUTHORS   Jacobson,R.H., Zhang,X.J., DuBose,R.F. and Matthews,B.W.
  TITLE     Three-dimensional structure of beta-galactosidase from E. coli
  JOURNAL   Nature 369 (6483), 761-766 (1994)
   PUBMED   8008071
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02836.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Hymenobacter"
                     /db_xref="taxon:89966"
     Protein         1..1089
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=121807
     Region          37..1071
                     /region_name="Bgal_small_N"
                     /note="Beta galactosidase small chain; cl46900"
                     /db_xref="CDD:481240"
ORIGIN      
        1 mllllistak aqeasvyffp nvshppaiyt gpegdawqip qitelnrepa rataysfpte
       61 kdalagdrsk tprllslngn wdfqfalkpa dapkdfyksr vqgwkqlavp anwemngydk
      121 piyksakypf rpvdppyvpq dyngvgsyqr tftvpagwqn mnltlhfggv ssafkvwvng
      181 kflgygedsc lpsefnatpy lqagenvvsv qvmrwsdgsy ledqdhwrls giyrevllla
      241 epkvrladfh wqakldkdyr davlsirprl enltgnndlt gyqvaaqlyd ragkpvldng
      301 lqlsadailn ekyprldnak fgllettvrn plkwsdeapt lytlvltltd kagavleaks
      361 ckvgfrsief skengkllln gkltylygvn rhdhhptkgm avsredirqd vrtlkqfnfn
      421 cirtshypnd pyfydlcdey gilvideanl ethglgskls ndpawtaayq ersirmalrd
      481 knhpsiifws lgnesgrgpn haamaawlhd fditrpihye paqgdphlpg yidpsnpnyp
      541 knhayriqvp rdqayvdmvs rmypglftae llanqdngdt rpvffceyah smgnatgnmk
      601 efwdiwrntk rviggciwef keqgllkhds tgtayyaygg dfqekyyddf tikgivesdg
      661 kpraamyeck rvyqpaectl tdankvliki enrhasksla dyavalvlre ngrvistkll
      721 prlrlaaghd tvislkpylp kmkagaeyla tisfalpqal gwadqgheva snqfaltgla
      781 qpaksaksyp avavrddata yvlsangfqv sidkasgalt syrqggteql aapllphftr
      841 pltdndrrgw kadkqlkpwf taapklqslt ldksnpgqps ltstytlidd kttvrvtytl
      901 ngagtlkvdy altpaaglpn iprvgmqcgi rhadtqisyy grgplenyid rrygfdagiy
      961 tqplsefads yvvpmeyanr tdvrwmqlad kqnagllvva dsllsmsawp yteqnieqar
     1021 htnklkdagl vtlnidlvqm gvggntswda qaapiekyqv pakpyrysfy llpvsgnnda
     1081 avraqaikf
//
LOCUS       WP_236018634             472 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [Hymenobacter].
ACCESSION   WP_236018634
VERSION     WP_236018634.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter
  ORGANISM  Hymenobacter
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Hymenobacter"
                     /db_xref="taxon:89966"
     Protein         1..472
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=51751
     Region          24..440
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(34..35,38..39,42,74,130..131,133..135,138,158,
                     161..162,165,262,265..266,269..271,274,313,317,366..367,
                     371,375,391,394..395,398..399,402)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 magsaiidnp salrvkprls fwqiwnmsfg flgiqfgfal qngnmsrife tmgakedela
       61 flwlaapttg lliqpiigyl sdrtwsprwg rrrpfflvga icaslallvm phvsalwmaa
      121 gmlwimdasi nismepfral vgdmlpsnqr ttgfgaqtff igigavvgsl lpyiftnwlh
      181 fsnvapaghi spslkyafyt ggiiyflavl wtvvrtreyp penlaefeae kartagfwni
      241 ikeafagisd mprtmrqlav vqffswlalf slwiyatpai tshiyhtsdt tskiynegad
      301 wvnvcfsvyn gvsalaalal pviaratsrr mthllcltag glglisiyfi qnpqlllvsm
      361 igvgvawasi lsipyamlag alpankmgyy mgvfnffivl pqmvagvtlg fftkhvfgge
      421 pvltlvfggc smilsglltl rvhdaddirl pnnmtpaenl aydvlasnnp nv
//
LOCUS       WP_236018802             417 aa            linear   BCT 02-MAR-2025
DEFINITION  HAMP domain-containing protein [Geomonas propionica].
ACCESSION   WP_236018802
VERSION     WP_236018802.1
KEYWORDS    RefSeq.
SOURCE      Geomonas propionica
  ORGANISM  Geomonas propionica
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
REFERENCE   1  (residues 1 to 417)
  AUTHORS   Aravind,L. and Ponting,C.P.
  TITLE     The cytoplasmic helical linker domain of receptor histidine kinase
            and methyl-accepting proteins is common to many prokaryotic
            signalling proteins
  JOURNAL   FEMS Microbiol Lett 176 (1), 111-116 (1999)
   PUBMED   10418137
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012876.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00672.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Geomonas propionica"
                     /db_xref="taxon:2798582"
     Protein         1..417
                     /product="HAMP domain-containing protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=45244
     Region          2..>234
                     /region_name="HAMP"
                     /note="HAMP domain [Signal transduction mechanisms];
                     COG2770"
                     /db_xref="CDD:442051"
     Region          183..224
                     /region_name="HAMP"
                     /note="Histidine kinase, Adenylyl cyclase,
                     Methyl-accepting protein, and Phosphatase (HAMP) domain;
                     cd06225"
                     /db_xref="CDD:381743"
     Region          236..>342
                     /region_name="GGDEF"
                     /note="Diguanylate-cyclase (DGC) or GGDEF domain; cd01949"
                     /db_xref="CDD:143635"
     Site            order(266,313)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143635"
     Site            order(271,274..275,279,283,309,311..314)
                     /site_type="active"
                     /db_xref="CDD:143635"
     Site            order(305,330)
                     /site_type="active"
                     /note="I-site [active]"
                     /db_xref="CDD:143635"
ORIGIN      
        1 malftaaalv fssyniyrst nitrsianne lpvisaliel rtsllsqegf agkyailrdp
       61 afidlfhqrq aealasldll gkgkptadlk qlkglylayq kaaedlfagh tgstapvrsa
      121 alkllnavda sylkrkdmlk lvlsradeqq kqtiwwtvai sctgfllaig vapfvtyrtf
      181 gairelqsat hriaagdfdy npdvpsgdei selardftkm aarlkvleqm sldaspltrl
      241 pgnfaiervl derlqsgeif afcyadldnf kpygdhygya kgsellrltg nliqaavkah
      301 ggkdgfvghv ggddfvmvih aervsavcea vidsfsaevv khyspqdlkv ggiegsdryg
      361 vqrffpvmti siaviicgrd qyssaveiar aaakvkdkak ekagskylig apgrvta
//
LOCUS       WP_236018844             263 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF268 domain-containing protein [Geomonas propionica].
ACCESSION   WP_236018844
VERSION     WP_236018844.1
KEYWORDS    RefSeq.
SOURCE      Geomonas propionica
  ORGANISM  Geomonas propionica
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015241.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03269.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Geomonas propionica"
                     /db_xref="taxon:2798582"
     Protein         1..263
                     /product="DUF268 domain-containing protein"
                     /calculated_mol_wt=29049
     Region          <145..234
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
ORIGIN      
        1 mlmgesaakv pgplrvlagk llclpgelra yrvfrqefkk fselpgaadr fqlewrdryp
       61 clhdktaitg fdrhyvfhta wgarkvaqik pqshvdisss lhfctlvsaf vpvrfydyrp
      121 vdlclsdlsc asadllnlpf ddesiaslsc mhvvehvglg rygdpldpeg dlkavaelkr
      181 vlapggsllf vvpvsgrpcc mfnahriysy sqvlelfygl dlvefslvpd dpvdgglvvd
      241 agkaladaqk ygcgcfwfrk pvt
//
LOCUS       WP_236018874             166 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Geomonas propionica].
ACCESSION   WP_236018874
VERSION     WP_236018874.1
KEYWORDS    RefSeq.
SOURCE      Geomonas propionica
  ORGANISM  Geomonas propionica
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
REFERENCE   1  (residues 1 to 166)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07883.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Geomonas propionica"
                     /db_xref="taxon:2798582"
     Protein         1..166
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=18708
     Region          <90..146
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 misfelkvea atlripfvle kialcpyqtv grrppektgl agqlssryas qeeginmesi
       61 fpepimtlpe adiplngvka flsqaehhqv ifmefeedid lpehshcaqv givirgridm
      121 lfsdelrtyk qgdvyyipag vkhsgkiyag yaditffdep nrykqk
//
LOCUS       WP_236018931             422 aa            linear   BCT 02-MAR-2025
DEFINITION  multiheme c-type cytochrome [Geomonas propionica].
ACCESSION   WP_236018931
VERSION     WP_236018931.1
KEYWORDS    RefSeq.
SOURCE      Geomonas propionica
  ORGANISM  Geomonas propionica
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024839.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13447.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Geomonas propionica"
                     /db_xref="taxon:2798582"
     Protein         1..422
                     /product="multiheme c-type cytochrome"
                     /calculated_mol_wt=46533
     Region          <15..78
                     /region_name="UshA_like_PCGU"
                     /note="UshA-like (seleno)protein; NF041198"
                     /db_xref="CDD:469102"
     Region          49..301
                     /region_name="Multi-haem_cyto"
                     /note="Seven times multi-haem cytochrome CxxCH; pfam13447"
                     /db_xref="CDD:433215"
     Region          391..418
                     /region_name="SHOCT"
                     /note="Short C-terminal domain; pfam09851"
                     /db_xref="CDD:430878"
ORIGIN      
        1 mmkslicavl llsapvlaga aepclpchae ktpaavaqwq gsahakagvg cekchgsdhd
       61 kivkgeakvg mkvcapchqk ayqehrasrh gmglhsgwgc trnlsdrkpg ecrfcheegd
      121 eaprsdvqca rflkqspema eigcnychsv edacdschsk hmtdlkivrd pnscakchmg
      181 pdhpqwemwq tslhgtlnas tgrktgpdcq tchmpkgthn vsigitmnsg gvpypaakaq
      241 pargdmvnic sdchapsfar kelergdqvr sqsiailkea ehviwdlndr glldpmpenr
      301 pphplsgqrl vtdsqmlyed tshierlffk mkkydyartv kgayhqnpay thwygnaelk
      361 mdlvdiksea srlkergkkg eskaaapgae delkvlkkkf ergalseaey arekgkvlek
      421 mr
//
LOCUS       WP_236018948             608 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein [Geomonas
            propionica].
ACCESSION   WP_236018948
VERSION     WP_236018948.1
KEYWORDS    RefSeq.
SOURCE      Geomonas propionica
  ORGANISM  Geomonas propionica
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
REFERENCE   1  (residues 1 to 608)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Geomonas propionica"
                     /db_xref="taxon:2798582"
     Protein         1..608
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=67468
     Region          64..275
                     /region_name="PBP2_HisK"
                     /note="The periplasmic sensor domain of histidine kinase
                     receptors; the type 2 periplasmic binding fold protein;
                     cd13704"
                     /db_xref="CDD:270422"
     Region          285..596
                     /region_name="COG4191"
                     /note="Signal transduction histidine kinase regulating
                     C4-dicarboxylate transport system [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443345"
ORIGIN      
        1 mpifrfahyi qrsraagagr krlrlprtam lllvlllalf asatgadtlg rggvgkavvv
       61 vggdfnyppy efvdhdgkpa gfnveltrai aevmgfkvei slgpwdgmrr aleqgdvdil
      121 qgmafsqert nevdfstpha llfqsiwirr ddrrirsied vrgkevivmk nsimhdfmkg
      181 fdpkarlilt dtlaealrll nqgrgdcalv srltgmylek emglkrivpv aepimtqayg
      241 yavkkgnaev larfneglai lkrsgqfqei hnkwlgvmeq qpvswgrvvr yvtlvslpll
      301 lilggtvvws rtlqkrvaqr teelarevae kqaaleklrm hqdqlvqadk laslgtlvag
      361 vaheinnpng lillnlprfe evlrgsqpil deyrgihgdf klgrhsydrl reelphmlse
      421 tqdaakrikr ivaelkdfar rdsaeltell dlnscaqaal rlventvvkn shqivahlad
      481 tlprvkgnsq rieqvivnll lnaaqslegs gksiqistrh drfrdlvllt vrdegrgvep
      541 ehlarltdpf fttkreeggc glglsisagi vkqhggtlnf dsepgfgttv tmelpalppg
      601 gnpehrgl
//
LOCUS       WP_236018954             123 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Geomonas propionica].
ACCESSION   WP_236018954
VERSION     WP_236018954.1
KEYWORDS    RefSeq.
SOURCE      Geomonas propionica
  ORGANISM  Geomonas propionica
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
REFERENCE   1  (residues 1 to 123)
  AUTHORS   Yuan,H.S., Finkel,S.E., Feng,J.A., Kaczor-Grzeskowiak,M.,
            Johnson,R.C. and Dickerson,R.E.
  TITLE     The molecular structure of wild-type and a mutant Fis protein:
            relationship between mutational changes and recombinational
            enhancer function or DNA binding
  JOURNAL   Proc Natl Acad Sci U S A 88 (21), 9558-9562 (1991)
   PUBMED   1946369
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02954.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Geomonas propionica"
                     /db_xref="taxon:2798582"
     Protein         1..123
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /calculated_mol_wt=12913
     Region          <68..116
                     /region_name="PEP_resp_reg"
                     /note="PEP-CTERM-box response regulator transcription
                     factor; TIGR02915"
                     /db_xref="CDD:274348"
ORIGIN      
        1 mkkrqvveda acrpasgtgn eshpagwmga qcvvlqrlfs grndlalpgg mldgetacgm
       61 ggtgagqmtl reardrvery mvhdaiqssg gnmskaaevl gvsrpalydl akkyglcrik
      121 srg
//
LOCUS       WP_236019028            2707 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Geomonas propionica].
ACCESSION   WP_236019028
VERSION     WP_236019028.1
KEYWORDS    RefSeq.
SOURCE      Geomonas propionica
  ORGANISM  Geomonas propionica
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024603.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13205.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2707
                     /organism="Geomonas propionica"
                     /db_xref="taxon:2798582"
     Protein         1..2707
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=273920
     Region          74..1497
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          <1381..1781
                     /region_name="COG4733"
                     /note="Phage-related protein, tail protein J [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443767"
     Region          1704..>1892
                     /region_name="Chi1"
                     /note="Chitinase [Carbohydrate transport and metabolism];
                     COG3469"
                     /db_xref="CDD:442692"
     Region          <2038..>2165
                     /region_name="COG4733"
                     /note="Phage-related protein, tail protein J [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443767"
     Region          2260..2316
                     /region_name="Cytochrome_C7"
                     /note="Cytochrome c7 and related cytochrome c; pfam14522"
                     /db_xref="CDD:434012"
     Region          2289..>2360
                     /region_name="Cytochrom_C3"
                     /note="Heme-binding domain of the class III cytochrome C
                     family and related proteins; cd08168"
                     /db_xref="CDD:173979"
ORIGIN      
        1 mrvsttqetv eaasglgllr nmsgrtrmnl igslvltlvi aifcvtamlm prnanawptk
       61 ytscsasgch vqidpdatit taingvvgta vtvaaggafe vdwkvtnvtn aasnvgvgve
      121 inlptgwtla kgtvnspaip gwnavwdaad gvaagwatan sysasgeyps spvgytinyd
      181 tsawdtgtrn aaydnatakd ldgiadnmgt daivtvpagt aagtytvvvl gvghdsaksh
      241 veqaitvtvt sggggdttkp vvsagfaatt pslsrtipvt gfaatdntgv tgymitttst
      301 aplagaagwt gtaptsytva tdgsftlypw akdaagnvsl vygspvtvvv dtvkpsvtst
      361 vptsgatgit pdstvtlnfs eavncatvtt stvtispavt waktscsgsq avftptgqaa
      421 ntpytvtagt gitdsagntm assypfsytt ataivrpdta isaplasavl stspaaitgs
      481 atagtnalgs vqvstnngst wsaatgtsaw sfswtlpaed yvshtilvka vdnaanedts
      541 pasvtvivdt vapaglansa panlatnqal ttslssgtat danvsaavqy ffelatdsgf
      601 ttgvqqsgwq ttktfaptlv ggttyywhvr akdaagntsa ytttwsftti aptapnvpsa
      661 sqyqadgsta iaqagtatst svvikstvtd vngdnvtlqv emitnantfs gtpncsstsv
      721 asgsvasatc sgltdglayk wrarttdgtl ssawvdfgas npdftvtvpn ttpaaptala
      781 qyqadgttai atggtassna vvigatvdgg ngdpvllevd lnndgiadca spyvtgpata
      841 qaicngladg sydwrvrakd skavssawta ftgtpdflvs tgldfgidtt pptdgiasat
      901 sgdgyitvsw taatdsgagl dpvntyklvk ssvstpadcs aaalyagngt syfdsavtng
      961 ttyyyrvcal deatnlsagv tvsgspstia lpdttitapa antvvgtgpv sitggssaga
     1021 npvasvqvst nngttwaaat gtapwsftwa pptedyvaht ilakgvdslg yadatpaqvv
     1081 vrvdnvapan vanatpanla tnvalatslt savatdants tavqyffela tdntfttgvq
     1141 qsswqtgtsf aptlasansy ywhvrakdaa gnisnysttw sfstigqsgp dapvaaqyqa
     1201 dgttaiaqgg natgstvvvk apvsdpngdn vtlqvemitn gnafagaanc sstavtsgsv
     1261 asaacsgltd glsykwrart tdgtaysawv dfggsdpdft valtnaapaa ptalaqfqad
     1321 gttaiasgaa astnvvvigt tvdggngdsv llevdlnndg iadcaspyvt gpataqafcg
     1381 gladgsfdwr vrakdskgav sawtaftgtp dftvatgldf avdttapidg sasdssgdgy
     1441 ikiswtpasd agagldpvnt ykvvkssvsa padcsgtaly tgngtsyfdn avtngttyyy
     1501 rvcsldevgn lsagatisgs asaialpdti msapaanavi ttgpasitgt asaganplas
     1561 vqvstnngst waaatgttsw sfswalased yvahtilakg vdtlgyadat paqvsvrvdn
     1621 vapaglnnsa panlataval naslasttat dgntsaavqy ffeiatnsgf ttgvqqsgwq
     1681 lgtsftptla patqyfwhvm akdaagntta ytttwsftsg vvapetvlsa ptagtvfsts
     1741 pavisgtata gtnalgsvqv svnngtswnt aigtgswsys wtlpaedyva htilaralds
     1801 asnpdatpss vsvyvdtvap agfansspan latavattas lstsmatdan ttaavqyffe
     1861 iatnsgftag vqqsawqtgl sfaptltnst tyywhvrtkd aagnisayst ttsfttaaat
     1921 ttvgqgtgei sltippggte idldaftlat qagtdtvtgv tvtlangtwa giasinvtdd
     1981 tgttiygtan pgsntvaitl ttpitvtttp tqyvlvinak tatsmpvppg atyavtgtvt
     2041 aiassnpksy gdtasatvti dnlspanvta aggaagiasn slywtnpadt dfagivvlrr
     2101 agsavtdtpv egvnylqdni igsstvayvg slnnfidapl tngtvyyyki faldargnys
     2161 atgvavgpyt pvrtawansp mlhtstttgs tkwsanggwg epgkkygaft catchnmttp
     2221 nimravtsva tgdgsnwatn ssptiavsyl npatdkgsdt vhatsnrice vchsqtaahr
     2281 ynnttaghng tvnctqchsh nagfkgsggs cllchnsprg vrqqvvgatl gstgddfvrp
     2341 srhikntsvk nvdciichae gdttstessv kqvtahgtsg apillrnvds qgnpgvagtn
     2401 ywswpgrrag gttinstdrd nmdrfcvnch dadgastitv ntagdaittg talarkntpf
     2461 npldggtpln vksqfnsgna vgsayashhn lniytkryta ayastyasrg gwtgtskdgv
     2521 avtwdtglhc sdchlnesna hgarnatrml qdkngadaaa tntndgsatf vcyrchlstv
     2581 ynysnvtvtg ksriehstfd nvpwgpgtyn dhgivcfnch mgggvntigg ihgnnrsitt
     2641 ltagatksyr fiygaelgln mseanwattt aptcytasst wggacnkhdg sagtgrigtp
     2701 nyarplq
//
LOCUS       WP_236019106             286 aa            linear   BCT 02-MAR-2025
DEFINITION  L,D-transpeptidase family protein [Geomonas propionica].
ACCESSION   WP_236019106
VERSION     WP_236019106.1
KEYWORDS    RefSeq.
SOURCE      Geomonas propionica
  ORGANISM  Geomonas propionica
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
REFERENCE   1  (residues 1 to 286)
  AUTHORS   Biarrotte-Sorin,S., Hugonnet,J.E., Delfosse,V., Mainardi,J.L.,
            Gutmann,L., Arthur,M. and Mayer,C.
  TITLE     Crystal structure of a novel beta-lactam-insensitive peptidoglycan
            transpeptidase
  JOURNAL   J Mol Biol 359 (3), 533-538 (2006)
   PUBMED   16647082
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015679.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03734.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Geomonas propionica"
                     /db_xref="taxon:2798582"
     Protein         1..286
                     /product="L,D-transpeptidase family protein"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=31561
     Region          44..237
                     /region_name="PRK10260"
                     /note="L,D-transpeptidase; Provisional"
                     /db_xref="CDD:182341"
ORIGIN      
        1 mvvltifagp aqpaesmpst yiggylgelr qykvrqgesl ieiarrfdlg yneirdanpg
       61 vdpvipapgt vvtipsawis pavierpsiv vnlaelrlyv fskigdaavq sfplgigdeg
      121 tdtpvgkfvi vekiinpswh vpqsirrqrp qlpavvapga rnplgrhalr lsrqdilihg
      181 tnrpwgigrr sshgclrlyp kdiaslfama hkgmqiqiiy qpvkvgtkeg rvfiefhcqg
      241 rdavgvgdil hmmadrnllr ridmgklvra yyenkgypid itwtgk
//
LOCUS       WP_236019123              99 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Geomonas propionica].
ACCESSION   WP_236019123
VERSION     WP_236019123.1
KEYWORDS    RefSeq.
SOURCE      Geomonas propionica
  ORGANISM  Geomonas propionica
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
REFERENCE   1  (residues 1 to 99)
  AUTHORS   Mullin,D.A., Zies,D.L., Mullin,A.H., Caballera,N. and Ely,B.
  TITLE     Genetic organization and transposition properties of IS511
  JOURNAL   Mol Gen Genet 254 (4), 456-463 (1997)
   PUBMED   9180700
REFERENCE   2  (residues 1 to 99)
  AUTHORS   Fischer,J., Maier,H., Viell,P. and Altenbuchner,J.
  TITLE     The use of an improved transposon mutagenesis system for DNA
            sequencing leads to the characterization of a new insertion
            sequence of Streptomyces lividans 66
  JOURNAL   Gene 180 (1-2), 81-89 (1996)
   PUBMED   8973350
REFERENCE   3  (residues 1 to 99)
  AUTHORS   Zekri,S. and Toro,N.
  TITLE     Identification and nucleotide sequence of Rhizobium meliloti
            insertion sequence ISRm6, a small transposable element that belongs
            to the IS3 family
  JOURNAL   Gene 175 (1-2), 43-48 (1996)
   PUBMED   8917074
  REMARK    Erratum:[Gene 1997 Mar 25;188(1):149]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01527.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Geomonas propionica"
                     /db_xref="taxon:2798582"
     Protein         1..99
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=11381
     Region          2..89
                     /region_name="InsE"
                     /note="Transposase InsE and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2963"
                     /db_xref="CDD:442203"
ORIGIN      
        1 mrsnrkydse fkreaiklvv degrtireve sslgithgvl kgwvqkhrdq qdpvkvshas
       61 veaelkhlrk enerllrere ilkkavaifs tdpnrysgs
//
LOCUS       WP_236019124             157 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Geomonas propionica].
ACCESSION   WP_236019124
VERSION     WP_236019124.1
KEYWORDS    RefSeq.
SOURCE      Geomonas propionica
  ORGANISM  Geomonas propionica
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02371.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Geomonas propionica"
                     /db_xref="taxon:2798582"
     Protein         <1..>157
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <9..157
                     /region_name="COG3547"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442768"
ORIGIN      
        1 qvaelftdpe arkiievdva midsycdvig ilepeiekta qqhdrhalml lrsikgvgqi
       61 ialvllyeiq dihrfetvqr fasyarlvkc thesagkkkg tggakignph lkwalseaav
      121 sfiqnnprag kfaenlarah gkgkalaiva hklgrai
//
LOCUS       WP_236019177             260 aa            linear   BCT 02-MAR-2025
DEFINITION  TIM barrel protein [Fuscibacter oryzae].
ACCESSION   WP_236019177
VERSION     WP_236019177.1
KEYWORDS    RefSeq.
SOURCE      Fuscibacter oryzae
  ORGANISM  Fuscibacter oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Fuscibacter.
REFERENCE   1  (residues 1 to 260)
  AUTHORS   Fry,J., Wood,M. and Poole,P.S.
  TITLE     Investigation of myo-inositol catabolism in Rhizobium leguminosarum
            bv. viciae and its effect on nodulation competitiveness
  JOURNAL   Mol Plant Microbe Interact 14 (8), 1016-1025 (2001)
   PUBMED   11497462
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013429.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01261.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Fuscibacter oryzae"
                     /db_xref="taxon:2803939"
     Protein         1..260
                     /product="TIM barrel protein"
                     /calculated_mol_wt=27471
     Region          1..258
                     /region_name="COG4130"
                     /note="Predicted sugar epimerase, xylose isomerase-like
                     family [Carbohydrate transport and metabolism]"
                     /db_xref="CDD:443306"
ORIGIN      
        1 mtaprlgwea fldlskalgc vgvefrndlk gplfggadpa avgaatrvrg lrflalaevk
       61 mfndwsdaka aeaealmkia vaagaeavsl iprndgvatd radsrkvsel alreilpmlk
      121 ahglkamvep lgfavcslry kdvladcida vggvgtyymv hdtfhhalag fgpifpeltg
      181 ivhvsgvedp iylddmrdsh rvlvgpndvl gnvaqiralr aagyagpvsy epfaesvhal
      241 dtpqaalaas mefirqgvea
//
LOCUS       WP_236019242             253 aa            linear   BCT 02-MAR-2025
DEFINITION  nitrilase-related carbon-nitrogen hydrolase [Fuscibacter oryzae].
ACCESSION   WP_236019242
VERSION     WP_236019242.1
KEYWORDS    RefSeq.
SOURCE      Fuscibacter oryzae
  ORGANISM  Fuscibacter oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Fuscibacter.
REFERENCE   1  (residues 1 to 253)
  AUTHORS   Pace,H.C. and Brenner,C.
  TITLE     The nitrilase superfamily: classification, structure and function
  JOURNAL   Genome Biol 2 (1), REVIEWS0001 (2001)
   PUBMED   11380987
REFERENCE   2  (residues 1 to 253)
  AUTHORS   Bork,P. and Koonin,E.V.
  TITLE     A new family of carbon-nitrogen hydrolases
  JOURNAL   Protein Sci 3 (8), 1344-1346 (1994)
   PUBMED   7987228
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012993.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00795.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Fuscibacter oryzae"
                     /db_xref="taxon:2803939"
     Protein         1..253
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /GO_process="GO:0008152 - metabolic process [Evidence
                     IEA]"
                     /calculated_mol_wt=26010
     Region          3..252
                     /region_name="nitrilase"
                     /note="Nitrilase superfamily, including nitrile- or
                     amide-hydrolyzing enzymes and amide-condensing enzymes;
                     cl11424"
                     /db_xref="CDD:448250"
     Site            order(42,110,114,118,143..144,146..147,168)
                     /site_type="active"
                     /db_xref="CDD:143587"
     Site            order(42,110,143)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:143587"
     Site            order(111..114,117,124..126,144,146..150,153..154,
                     179..180,182..184,186..187,208..209,247..250)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143587"
ORIGIN      
        1 mmrlalwqap spaedvaggl aglgralaga aaagaevlvg pesflpgyns gniarlaqpr
       61 ggdwhqalad larqagcalv lgygerdgdr vfnsavafgp dgaelahyrk iqlygpreka
      121 iyapgdryat falkgrvmgl licydvefgp hvaalaarga davlvptanm mpythvaeat
      181 vpamaannav givyanycgv egdltyaggs vitgphgeil akagpgaall iadlpprdaa
      241 rmynmatdyr pat
//
LOCUS       WP_236019397             162 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6446 family protein [Fuscibacter oryzae].
ACCESSION   WP_236019397
VERSION     WP_236019397.1
KEYWORDS    RefSeq.
SOURCE      Fuscibacter oryzae
  ORGANISM  Fuscibacter oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Fuscibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040106.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20044.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Fuscibacter oryzae"
                     /db_xref="taxon:2803939"
     Protein         1..162
                     /product="DUF6446 family protein"
                     /calculated_mol_wt=17551
     Region          46..156
                     /region_name="DUF6446"
                     /note="Family of unknown function (DUF6446); pfam20044"
                     /db_xref="CDD:466272"
ORIGIN      
        1 mngrmtwgkf laggivvial lagaamywlq eyayyteasf kpgaeimltt iegqqpepii
       61 adhvtgidad ssplrfracf htsmdqamlt etyvaypkav plngptwfsc fnateigeal
      121 ekgqalafls qsniapeidr vvavfpdgra fawhqispda ge
//
LOCUS       WP_236019585              66 aa            linear   BCT 02-MAR-2025
DEFINITION  YnfE family protein [Priestia megaterium].
ACCESSION   WP_236019585
VERSION     WP_236019585.1
KEYWORDS    RefSeq.
SOURCE      Priestia megaterium (Bacillus megaterium)
  ORGANISM  Priestia megaterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036344.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17452.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Priestia megaterium"
                     /db_xref="taxon:1404"
     Protein         1..66
                     /product="YnfE family protein"
                     /calculated_mol_wt=7594
     Region          <1..62
                     /region_name="YnfE"
                     /note="Uncharacterized YnfE-like; pfam17452"
                     /db_xref="CDD:340167"
ORIGIN      
        1 mkapdyegke rdlenqqeql eqyerylkae sispegfdri vdaavgyask disfseleem
       61 ynqltk
//
LOCUS       WP_236019660             125 aa            linear   BCT 02-MAR-2025
DEFINITION  YolD-like family protein [Priestia megaterium].
ACCESSION   WP_236019660
VERSION     WP_236019660.1
KEYWORDS    RefSeq.
SOURCE      Priestia megaterium (Bacillus megaterium)
  ORGANISM  Priestia megaterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
REFERENCE   1  (residues 1 to 125)
  AUTHORS   Makarova,K.S., Anantharaman,V., Grishin,N.V., Koonin,E.V. and
            Aravind,L.
  TITLE     CARF and WYL domains: ligand-binding regulators of prokaryotic
            defense systems
  JOURNAL   Front Genet 5, 102 (2014)
   PUBMED   24817877
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 125)
  AUTHORS   Permina,E.A., Mironov,A.A. and Gelfand,M.S.
  TITLE     Damage-repair error-prone polymerases of eubacteria: association
            with mobile genome elements
  JOURNAL   Gene 293 (1-2), 133-140 (2002)
   PUBMED   12137951
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020438.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08863.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Priestia megaterium"
                     /db_xref="taxon:1404"
     Protein         1..125
                     /product="YolD-like family protein"
                     /calculated_mol_wt=14494
     Region          29..123
                     /region_name="YolD"
                     /note="YolD-like protein; pfam08863"
                     /db_xref="CDD:430270"
ORIGIN      
        1 mdtsikaikt taflkegldk mkkwrpfatm peqylglqei inkqlevpqp llteeqmeqi
       61 nftliealpt nkqvyltyyk ngqlitetgl iqfvdslgdl fifidevfel knkmrlseli
      121 dvrft
//
LOCUS       WP_236019707            1127 aa            linear   BCT 02-MAR-2025
DEFINITION  ImcF-related family protein [Citrobacter europaeus].
ACCESSION   WP_236019707
VERSION     WP_236019707.1
KEYWORDS    RefSeq.
SOURCE      Citrobacter europaeus
  ORGANISM  Citrobacter europaeus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter.
REFERENCE   1  (residues 1 to 1127)
  AUTHORS   Das,S., Chakrabortty,A., Banerjee,R. and Chaudhuri,K.
  TITLE     Involvement of in vivo induced icmF gene of Vibrio cholerae in
            motility, adherence to epithelial cells, and conjugation frequency
  JOURNAL   Biochem Biophys Res Commun 295 (4), 922-928 (2002)
   PUBMED   12127983
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018470.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06761.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1127
                     /organism="Citrobacter europaeus"
                     /db_xref="taxon:1914243"
     Protein         1..1127
                     /product="ImcF-related family protein"
                     /calculated_mol_wt=126648
     Region          <365..1113
                     /region_name="IcmF"
                     /note="Type VI protein secretion system component VasK
                     [Intracellular trafficking, secretion, and vesicular
                     transport]; COG3523"
                     /db_xref="CDD:442745"
ORIGIN      
        1 mrfllpiknp tvrywliama pmlisaiacl iiwywpekvg mlpgslkhsr witglgatta
       61 vtgvyavltw fsarssgrqs fdltrahiqg ddqprisesy qhhqqstpfa dmyaylhrqy
      121 glfwrqrvrv ilvigeetev asiaptlaek qwlegegtvl iyggspqesv dlgplstlrk
      181 lrsarpvdgi ilslsyeqas saqwmsdsrr sleqtgnayh wlppiwlwqt dpsmqgtrit
      241 qavgvffhek tcpesvgrel trllpqlceq gmrqiftdnr hdyllrlgqw lklggieswq
      301 riltpwlsgk qwrmpicglm fspsvtvaaa svihahywsp paafhgvlkr gaqatgrhmg
      361 lsrgrimcyv vavviglwgv gslisfaany yqmtsltnka qqlaigeqvs daeliqlnel
      421 rndieriqtq kntigwrhfg lnhdtellav llpiygvann rlmrdeaarv lsekldalth
      481 lppgsqqrad laksaydqlk awlmmgrpek adpaffsqvm tltqptrkgi stgiwqslsp
      541 dlwgfymqtl pgqpdwkiip daqvmvatrq illaqieqrn gdnaiylkml gsvsrnfpdm
      601 plaqmtndtd aaqlfttset vpgvftrqaw egqvqqaiad avasrreeid wvlsdnqkns
      661 raevspealk qrltdryfse ysgswlkfln slrwkparnl sdvvdqltlm sdvrqspvva
      721 lmntlawqgq agkkrealsd slmksaekil qkeeeapvid qhandmtgpl detfgpllai
      781 agkgdtpnnl ttetslsfqt fltrvtrvrl kllqvthsad pqvmmqqlaq tvfqgknidl
      841 tdtreygsll aaglgeewsg fgdalfvqpl tqaweqvlqp saagineswq rtvvsdwqea
      901 tdgrypvseg rsdiplpvla efirrdtgki dqflhenlag lmhregrrwe vdemntqgli
      961 inpefiqavn rlgevrdalf adgsqgmrfe lrarpvpdvv etilsidgqr lhyfnqmesw
     1021 qsfrwpgesq rpgamltwtt tqgganlygd ypgelglirw leqgraekrd dgmwqltlsa
     1081 pdgkklcwlm rtgpgggpla llklrgfvlp kdiflvsrqr nsdagin
//
LOCUS       WP_236019723             330 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Citrobacter sp. Ce119].
ACCESSION   WP_236019723
VERSION     WP_236019723.1
KEYWORDS    RefSeq.
SOURCE      Citrobacter sp. Ce119
  ORGANISM  Citrobacter sp. Ce119
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter.
REFERENCE   1  (residues 1 to 330)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 330)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 330)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Citrobacter sp. Ce119"
                     /db_xref="taxon:2985042"
     Protein         1..330
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=36104
     Region          17..317
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(117..118,121,166)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238347"
ORIGIN      
        1 mpvllllplt gatagnyplt iencgvtetf nhapsrvvti gqhetelmla lelkdkivgt
       61 avwfgalpdd lkkqgaglkr laenapgfea vaaqrpelvl aqynwhvgpq gevatrqqfe
      121 qlgirtwisp adctaktvta tsngdgarsk pysidiilde isalarvfdv pargealkqk
      181 lserivaaqq qihmqpqapl kvvywfsspr lkgdpwiags kgapgwinkt lglnniidsd
      241 eewpavtweh ivksqpdiiv iasmerrlyp addvetkkrf letdpvtrem pavkqghivv
      301 vpamslnpsl rnveavelis qqmnafapsr
//
LOCUS       WP_236019892             770 aa            linear   BCT 02-MAR-2025
DEFINITION  mechanosensitive ion channel domain-containing protein [Sabulicella
            rubraurantiaca].
ACCESSION   WP_236019892
VERSION     WP_236019892.1
KEYWORDS    RefSeq.
SOURCE      Sabulicella rubraurantiaca
  ORGANISM  Sabulicella rubraurantiaca
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae; Sabulicella.
REFERENCE   1  (residues 1 to 770)
  AUTHORS   Flegler,V.J., Rasmussen,A., Borbil,K., Boten,L., Chen,H.A.,
            Deinlein,H., Halang,J., Hellmanzik,K., Loffler,J., Schmidt,V.,
            Makbul,C., Kraft,C., Hedrich,R., Rasmussen,T. and Bottcher,B.
  TITLE     Mechanosensitive channel gating by delipidation
  JOURNAL   Proc Natl Acad Sci U S A 118 (33) (2021)
   PUBMED   34376558
REFERENCE   2  (residues 1 to 770)
  AUTHORS   Lai,J.Y., Poon,Y.S., Kaiser,J.T. and Rees,D.C.
  TITLE     Open and shut: crystal structures of the dodecylmaltoside
            solubilized mechanosensitive channel of small conductance from
            Escherichia coli and Helicobacter pylori at 4.4 A and 4.1 A
            resolutions
  JOURNAL   Protein Sci 22 (4), 502-509 (2013)
   PUBMED   23339071
REFERENCE   3  (residues 1 to 770)
  AUTHORS   Zhang,X., Wang,J., Feng,Y., Ge,J., Li,W., Sun,W., Iscla,I., Yu,J.,
            Blount,P., Li,Y. and Yang,M.
  TITLE     Structure and molecular mechanism of an anion-selective
            mechanosensitive channel of small conductance
  JOURNAL   Proc Natl Acad Sci U S A 109 (44), 18180-18185 (2012)
   PUBMED   23074248
REFERENCE   4  (residues 1 to 770)
  AUTHORS   Pliotas,C., Ward,R., Branigan,E., Rasmussen,A., Hagelueken,G.,
            Huang,H., Black,S.S., Booth,I.R., Schiemann,O. and Naismith,J.H.
  TITLE     Conformational state of the MscS mechanosensitive channel in
            solution revealed by pulsed electron-electron double resonance
            (PELDOR) spectroscopy
  JOURNAL   Proc Natl Acad Sci U S A 109 (40), E2675-E2682 (2012)
   PUBMED   23012406
REFERENCE   5  (residues 1 to 770)
  AUTHORS   Kloda,A. and Martinac,B.
  TITLE     Structural and functional differences between two homologous
            mechanosensitive channels of Methanococcus jannaschii
  JOURNAL   EMBO J 20 (8), 1888-1896 (2001)
   PUBMED   11296222
REFERENCE   6  (residues 1 to 770)
  AUTHORS   Kloda,A. and Martinac,B.
  TITLE     Molecular identification of a mechanosensitive channel in archaea
  JOURNAL   Biophys J 80 (1), 229-240 (2001)
   PUBMED   11159397
REFERENCE   7  (residues 1 to 770)
  AUTHORS   Martinac,B.
  TITLE     Mechanosensitive channels in prokaryotes
  JOURNAL   Cell Physiol Biochem 11 (2), 61-76 (2001)
   PUBMED   11275684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013117.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00924.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Sabulicella rubraurantiaca"
                     /db_xref="taxon:2811429"
     Protein         1..770
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=81702
     Region          <351..730
                     /region_name="PRK11281"
                     /note="mechanosensitive channel MscK; cl46976"
                     /db_xref="CDD:481316"
ORIGIN      
        1 mirllfvlll laapaqaqvp vvpmpapaap aapaqatpap patspevaal levlrdesrr
       61 aeliraleta qtgapaaapg eataapsdae tpalpapaei aagiagrlga llgdavdals
      121 aatdlrgvgh wiselaqder lrqqvgsllw klllvlgggl vaewvvnral rrlrarlerr
      181 aaaiqgplpv lrrlpwilgn laldllpila fgvvaigtvg flttwpsnrv imetiatsym
      241 aaravmavgr mvfapsstkl rlvrcddeta hyatlwirrl altavtfhal selalffglp
      301 paaqaaiwrl gllglsvlla vvvmqnrtav asvlaapplk egdepdsarr flrgardrla
      361 eawhvlavlw llaawtvwal qidrgferli tasvmtvvii algkvvdelm rrglarlmri
      421 spelartypg leartnrylp alrgilsfli llitlillle awglgalswf rpgrvggrav
      481 savltitlta glalaiweaa naaiqrhlas lpasgqaaqs arvrtllpml rtalgvvltv
      541 vvglttlsev gvnvapllag agvvglavgf gsqtlvrdvi tgifllfeda vavgdtvtvg
      601 tltgtveqls irsiklrald gaihiipfsa vttvtnqtrd fgyavvdlav dygastdqai
      661 rimrsvgesl redeawspql laplevmgvd rmgdgvvlra rimtpparrl avarelnrri
      721 kqafdaadir lwaagagreg fkppapeptk pppqpqspgg rsgvrawprp
//
LOCUS       WP_236020098             199 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme [Sabulicella
            rubraurantiaca].
ACCESSION   WP_236020098
VERSION     WP_236020098.1
KEYWORDS    RefSeq.
SOURCE      Sabulicella rubraurantiaca
  ORGANISM  Sabulicella rubraurantiaca
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae; Sabulicella.
REFERENCE   1  (residues 1 to 199)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Sabulicella rubraurantiaca"
                     /db_xref="taxon:2811429"
     Protein         1..199
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /calculated_mol_wt=21234
     Region          8..196
                     /region_name="PRK06163"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:235721"
ORIGIN      
        1 mtmealhnak vmnrfdltkr lvaklkdeav iggignsnfd lwasghrpqn fymlgsmgla
       61 apialgfala qpqrrvfale gdgsllmqlg clstiatrap rnlcvilwdn gvyqitgsqp
      121 tpaatartdf vaiarasgls qshwaadeae feslvdasla gegpffigvr vdsqpavaqp
      181 erdpsrirds fmrgvgskg
//
LOCUS       WP_236020360              41 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Sabulicella rubraurantiaca].
ACCESSION   WP_236020360
VERSION     WP_236020360.1
KEYWORDS    RefSeq.
SOURCE      Sabulicella rubraurantiaca
  ORGANISM  Sabulicella rubraurantiaca
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae; Sabulicella.
REFERENCE   1  (residues 1 to 41)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..41
                     /organism="Sabulicella rubraurantiaca"
                     /db_xref="taxon:2811429"
     Protein         1..>41
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>41
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 makakfertk phcnigtigh vdhgktslta aitkvlaktg g
//
LOCUS       WP_236020387             100 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6118 family protein, partial [Brucella anthropi].
ACCESSION   WP_236020387
VERSION     WP_236020387.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039997.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19613.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..>100
                     /product="DUF6118 family protein"
     Region          5..>100
                     /region_name="DUF6118"
                     /note="Family of unknown function (DUF6118); pfam19613"
                     /db_xref="CDD:437445"
ORIGIN      
        1 mteldddreg fepealeeda gdpaaafdal rrtvdtlagd ltremttirk gveaafeefd
       61 rhgppqdykp elaqivqqla hvaerlhgve qspilrqgaq
//
LOCUS       WP_236020394             719 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Sabulicella rubraurantiaca].
ACCESSION   WP_236020394
VERSION     WP_236020394.1
KEYWORDS    RefSeq.
SOURCE      Sabulicella rubraurantiaca
  ORGANISM  Sabulicella rubraurantiaca
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae; Sabulicella.
REFERENCE   1  (residues 1 to 719)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Sabulicella rubraurantiaca"
                     /db_xref="taxon:2811429"
     Protein         1..719
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=79235
     Region          <1..>180
                     /region_name="PRK13558"
                     /note="bacterio-opsin activator; Provisional"
                     /db_xref="CDD:237426"
     Region          99..712
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mplstlpvla lqildetadg vlvtdrsqpd dpivyanaaf crmtgyplae vlgrncrflq
       61 ggdrnqpeiv vmreairsgr ptvvtlrnyr qdgslfwnev rlaplradad vggqpryfvg
      121 lqrdvsdqva aeralreaaa sekrsaeera ilakdanqar qeaehatarl asvlesmmda
      181 vivldhdwrv tylnenarrl larrslqvgs nlwdvypeea dgifarhyrq alaeqktvsf
      241 eeflsaleiw leiqasptpe glsiffrdit errrveqewl lahermahma rhdgltglpn
      301 rmsfreraey llgrwsegak hallcldlrg fkgvndtlgh qagdallrlv aerlqtcvrg
      361 sdmvvrlggd efvilqteia apaeakelar rilgtlaapf vldsepvavg asigiavapn
      421 dgrtpddllk aadsalycak gegrgtyrff apgmdaqlqe rhfirqalhg alergefelh
      481 fqplvalatg gltafealmr wrhpergmis parfipvaee agaivplgew alqeacrraa
      541 gwpapisvav nlsplqfgsg tlieavrhal datgleperl qleitesvll ledsaslrtl
      601 eelrrlgvrl amddfgtgys slsylrsfpf dkikldqsfv rdlpnsadcq aivravagla
      661 sglrittvae gieteeqlea lrakgfdegq ghlfgkavlg tevplliarh qaglvfrhg
//
LOCUS       WP_236020468             110 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Sabulicella
            rubraurantiaca].
ACCESSION   WP_236020468
VERSION     WP_236020468.1
KEYWORDS    RefSeq.
SOURCE      Sabulicella rubraurantiaca
  ORGANISM  Sabulicella rubraurantiaca
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae; Sabulicella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Sabulicella rubraurantiaca"
                     /db_xref="taxon:2811429"
     Protein         1..110
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=11939
     Region          <1..102
                     /region_name="PRK09685"
                     /note="DNA-binding transcriptional activator FeaR;
                     Provisional"
                     /db_xref="CDD:236612"
ORIGIN      
        1 mnvraviear ltdpsldast vaaavgvsvr yanaalareg tsirrlilar rlarcrkala
       61 daaqagrtvt eiahawgfsd mthfsrsfkc aygvtpsdyr hrrgefdciq
//
LOCUS       WP_236020494             334 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Sabulicella
            rubraurantiaca].
ACCESSION   WP_236020494
VERSION     WP_236020494.1
KEYWORDS    RefSeq.
SOURCE      Sabulicella rubraurantiaca
  ORGANISM  Sabulicella rubraurantiaca
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae; Sabulicella.
REFERENCE   1  (residues 1 to 334)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Sabulicella rubraurantiaca"
                     /db_xref="taxon:2811429"
     Protein         1..334
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=35085
     Region          17..317
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(23,25..26,28,47..49,89..91,131..133,157,161,
                     184..187)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(108,133,157,161)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mtgslaggpr sgnlramqia ilggggflgr klaarlaaeg aatrltlfdm aepppldapf
       61 paerlagnvt dpvalaraip egtdavihla avvsaaaead ydlgldvnlr gtlaviercr
      121 qlakpprvvf tssvasfggg qaamlpdear qlptnsygaq kaaaelllqd asrrgmldav
      181 sirlptviir pgrpnkaass fvsailrepl lgletplpvg edfrlwvcsp riavdwlhha
      241 mtmdtaplgl drginppgls vsvaemlsvl tpeqralvkp epdanvaaiv ggwpaaftae
      301 rarrlgfrpq pgmdailqgf leddleptrr erlg
//
LOCUS       WP_236020528             124 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6152 family protein [Sabulicella rubraurantiaca].
ACCESSION   WP_236020528
VERSION     WP_236020528.1
KEYWORDS    RefSeq.
SOURCE      Sabulicella rubraurantiaca
  ORGANISM  Sabulicella rubraurantiaca
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae; Sabulicella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039360.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19649.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Sabulicella rubraurantiaca"
                     /db_xref="taxon:2811429"
     Protein         1..124
                     /product="DUF6152 family protein"
                     /calculated_mol_wt=13385
     Region          11..96
                     /region_name="DUF6152"
                     /note="Family of unknown function (DUF6152); pfam19649"
                     /db_xref="CDD:437481"
ORIGIN      
        1 mqrraflggt alaaiatsat ahhgwnwaeg eqmeltgtir qvtiapphpt lqvetpndgv
       61 wtvelgnpsl trrsgfvegv anpgdrvval gnrsrnrger rmkavritvg drrfdiyper
      121 iggg
//
LOCUS       WP_236020640             106 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6665 family protein [Devosia sediminis].
ACCESSION   WP_236020640
VERSION     WP_236020640.1
KEYWORDS    RefSeq.
SOURCE      Devosia sediminis
  ORGANISM  Devosia sediminis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Devosiaceae; Devosia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042751.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20370.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Devosia sediminis"
                     /db_xref="taxon:2798801"
     Protein         1..106
                     /product="DUF6665 family protein"
                     /calculated_mol_wt=11581
     Region          4..106
                     /region_name="DUF6665"
                     /note="Family of unknown function (DUF6665); pfam20370"
                     /db_xref="CDD:466519"
ORIGIN      
        1 maglrdsldl irmvrpeagh aaieheilae rassltaaer rvvkalaelt agadrptwls
       61 eaqqavwayf vqreligfrr hddvirdlgi pqevlnglga sparsr
//
LOCUS       WP_236020787             226 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1236 domain-containing protein [Devosia sediminis].
ACCESSION   WP_236020787
VERSION     WP_236020787.1
KEYWORDS    RefSeq.
SOURCE      Devosia sediminis
  ORGANISM  Devosia sediminis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Devosiaceae; Devosia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018527.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06823.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Devosia sediminis"
                     /db_xref="taxon:2798801"
     Protein         1..226
                     /product="DUF1236 domain-containing protein"
                     /calculated_mol_wt=22729
     Region          4..96
                     /region_name="YraI"
                     /note="Uncharacterized conserved protein YraI [Function
                     unknown]; COG4991"
                     /db_xref="CDD:444015"
     Region          167..226
                     /region_name="DUF1236"
                     /note="Protein of unknown function (DUF1236); pfam06823"
                     /db_xref="CDD:429137"
ORIGIN      
        1 mnkmlkmmtv avlastamgg valaqsssat atadlnirsg pgphyesigf iasgdtatve
       61 gcldaskwcr vdyngvngwa ysdyltadls gevvvltdry advgletvty tddggaegga
      121 lagaaggavv galvggpiga aiggtvgaas gatagaiidp petarayita npldpvyleg
      181 evvigagvpd tvvletipdy eysyvyingq pvlvdpatrq ivyvlr
//
LOCUS       WP_236020867             185 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Devosia sediminis].
ACCESSION   WP_236020867
VERSION     WP_236020867.1
KEYWORDS    RefSeq.
SOURCE      Devosia sediminis
  ORGANISM  Devosia sediminis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Devosiaceae; Devosia.
REFERENCE   1  (residues 1 to 185)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 185)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Devosia sediminis"
                     /db_xref="taxon:2798801"
     Protein         1..185
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=20860
     Region          16..181
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(22,36..37,115,117,133,168)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:271175"
     Site            order(36,133,136,159,168)
                     /site_type="active"
                     /db_xref="CDD:271175"
ORIGIN      
        1 mgrhknatgp irffldregr mrdralfdla idsklrgcdl vklkigtlvt greiraramv
       61 tqqktgrpvq feitsdarts vlawlerrgg svedfvfpsr adpndhlstr qyarlvdewv
      121 taiglrkeey gthslrrtka sliykatgnl ravqillght kientvrylg vdvedalela
      181 ehtev
//
LOCUS       WP_236021109             228 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Sedimentimonas flavescens].
ACCESSION   WP_236021109
VERSION     WP_236021109.1
KEYWORDS    RefSeq.
SOURCE      Sedimentimonas flavescens
  ORGANISM  Sedimentimonas flavescens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Rhodobacter group; Sedimentimonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024635.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13238.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Sedimentimonas flavescens"
                     /db_xref="taxon:2851012"
     Protein         1..228
                     /product="AAA family ATPase"
                     /calculated_mol_wt=24856
     Region          19..226
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Site            order(49,54..57)
                     /site_type="active"
                     /db_xref="CDD:238977"
ORIGIN      
        1 maefwlgdsn gpmgdvgafm dselrvdrad laahirqldg arnliaivga pgsgkshlae
       61 elaaqlnaht pgsaavvgmd gfhrsnaeld elgllahkga pdtfnvagln dllttlraar
      121 advtvptfdr evdepdphga ivpaatryvl iegnyllltr pewrdlvply dlsirlevpe
      181 delrarlarr wqdlpaeear rkidendlpn grlirrenra adfvvfga
//
LOCUS       WP_236021165             488 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Sedimentimonas flavescens].
ACCESSION   WP_236021165
VERSION     WP_236021165.1
KEYWORDS    RefSeq.
SOURCE      Sedimentimonas flavescens
  ORGANISM  Sedimentimonas flavescens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Rhodobacter group; Sedimentimonas.
REFERENCE   1  (residues 1 to 488)
  AUTHORS   Li,Y., Bahti,P., Shaw,N., Song,G., Chen,S., Zhang,X., Zhang,M.,
            Cheng,C., Yin,J., Zhu,J.Y., Zhang,H., Che,D., Xu,H., Abbas,A.,
            Wang,B.C. and Liu,Z.J.
  TITLE     Crystal structure of a novel non-Pfam protein AF1514 from
            Archeoglobus fulgidus DSM 4304 solved by S-SAD using a Cr X-ray
            source
  JOURNAL   Proteins 71 (4), 2109-2113 (2008)
   PUBMED   18361456
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024977.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13589.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Sedimentimonas flavescens"
                     /db_xref="taxon:2851012"
     Protein         1..488
                     /product="ATP-binding protein"
                     /calculated_mol_wt=53607
     Region          15..149
                     /region_name="HATPase"
                     /note="Histidine kinase-like ATPase domain; cl00075"
                     /db_xref="CDD:469604"
ORIGIN      
        1 mleslrglgy aaptaladlv dnsiaanard vavhlewagt eswvrivddg dgmddaalea
       61 gmrlgardpr aeraatdlgr fglglktasf sqarrltvas rkeggpvvcl rwdldligqe
      121 pgadwplfeg pspgsehlla pldqmahgtv vlwekldriv tdgfaptdmi eladrveahl
      181 amtfhrlidg qlpmlrlsln grglkpwdpy llghpgkale speyrilhtt gvtvqchvlp
      241 hrdmlkpaeq eaaagpggwt qqegfyvyrn krlllaggwl glgdggkpwp rdeahrlari
      301 rldipnsada dwkinvlkst asppvrlrsq lhrlatetrd tarrvfahrg hvtpasgtrp
      361 navaeawqvr rsaqgtsyri ardhdllasi ldragplkpd ilallrliee tvpvqriwld
      421 taedketprt gftgaaenev metlssmfea lvkfrglspt earerlgrtp pfdrhldlva
      481 aleakdtq
//
LOCUS       WP_236021241             217 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1236 domain-containing protein [Sedimentimonas flavescens].
ACCESSION   WP_236021241
VERSION     WP_236021241.1
KEYWORDS    RefSeq.
SOURCE      Sedimentimonas flavescens
  ORGANISM  Sedimentimonas flavescens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Rhodobacter group; Sedimentimonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018527.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06823.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Sedimentimonas flavescens"
                     /db_xref="taxon:2851012"
     Protein         1..217
                     /product="DUF1236 domain-containing protein"
                     /calculated_mol_wt=22033
     Region          5..94
                     /region_name="YraI"
                     /note="Uncharacterized conserved protein YraI [Function
                     unknown]; COG4991"
                     /db_xref="CDD:444015"
     Region          86..>147
                     /region_name="COG4803"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:443831"
     Region          158..217
                     /region_name="DUF1236"
                     /note="Protein of unknown function (DUF1236); pfam06823"
                     /db_xref="CDD:429137"
ORIGIN      
        1 mmfiktilgm svvagliaga ataetqataw tdlnmrdgpg pmhsivdvip andtvmvqgc
       61 ltdaswcrvt hgetsgwaag nylattiena pvalasgdkr vvlktvtydn eqaataggla
      121 tgaiagalva gpvgavvgai vggavgasve pdptvvtyvk snpvdpiyld gevvvgagip
      181 dtvmlapvpe styeyaying vlvlvetkdr kvvhivr
//
LOCUS       WP_236021285             131 aa            linear   BCT 02-MAR-2025
DEFINITION  CBS domain-containing protein [Sedimentimonas flavescens].
ACCESSION   WP_236021285
VERSION     WP_236021285.1
KEYWORDS    RefSeq.
SOURCE      Sedimentimonas flavescens
  ORGANISM  Sedimentimonas flavescens
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Rhodobacter group; Sedimentimonas.
REFERENCE   1  (residues 1 to 131)
  AUTHORS   Scott,J.W., Hawley,S.A., Green,K.A., Anis,M., Stewart,G.,
            Scullion,G.A., Norman,D.G. and Hardie,D.G.
  TITLE     CBS domains form energy-sensing modules whose binding of adenosine
            ligands is disrupted by disease mutations
  JOURNAL   J Clin Invest 113 (2), 274-284 (2004)
   PUBMED   14722619
REFERENCE   2  (residues 1 to 131)
  AUTHORS   Kemp,B.E.
  TITLE     Bateman domains and adenosine derivatives form a binding contract
  JOURNAL   J Clin Invest 113 (2), 182-184 (2004)
   PUBMED   14722609
REFERENCE   3  (residues 1 to 131)
  AUTHORS   Janosik,M., Kery,V., Gaustadnes,M., Maclean,K.N. and Kraus,J.P.
  TITLE     Regulation of human cystathionine beta-synthase by
            S-adenosyl-L-methionine: evidence for two catalytically active
            conformations involving an autoinhibitory domain in the C-terminal
            region
  JOURNAL   Biochemistry 40 (35), 10625-10633 (2001)
   PUBMED   11524006
REFERENCE   4  (residues 1 to 131)
  AUTHORS   Zhang,R., Evans,G., Rotella,F.J., Westbrook,E.M., Beno,D.,
            Huberman,E., Joachimiak,A. and Collart,F.R.
  TITLE     Characteristics and crystal structure of bacterial
            inosine-5'-monophosphate dehydrogenase
  JOURNAL   Biochemistry 38 (15), 4691-4700 (1999)
   PUBMED   10200156
REFERENCE   5  (residues 1 to 131)
  AUTHORS   Ponting,C.P.
  TITLE     CBS domains in CIC chloride channels implicated in myotonia and
            nephrolithiasis (kidney stones)
  JOURNAL   J Mol Med (Berl) 75 (3), 160-163 (1997)
   PUBMED   9106071
REFERENCE   6  (residues 1 to 131)
  AUTHORS   Bateman,A.
  TITLE     The structure of a domain common to archaebacteria and the
            homocystinuria disease protein
  JOURNAL   Trends Biochem Sci 22 (1), 12-13 (1997)
   PUBMED   9020585
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012780.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00571.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Sedimentimonas flavescens"
                     /db_xref="taxon:2851012"
     Protein         1..131
                     /product="CBS domain-containing protein"
                     /calculated_mol_wt=14456
     Region          13..125
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
     Region          13..78
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
     Site            order(14..16,38..40,105,117,119,121..122,125)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:341358"
     Site            order(38,50,55..56,59,83,105..107,121)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:341358"
     Region          83..125
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
ORIGIN      
        1 mslhetlhml vvrdmpvlhp dmpirravai lvqenaaava viddsgalkg llsqkdcfrp
       61 tlnasyyqew kgtvadfmtt nlmtlpvstd itdaaeaflt hsfhlfpvld geqfvgmlkr
      121 sdllkrlvem g
//
LOCUS       WP_236021321             516 aa            linear   BCT 02-MAR-2025
DEFINITION  PQQ-dependent sugar dehydrogenase [Algoriphagus oliviformis].
ACCESSION   WP_236021321
VERSION     WP_236021321.1
KEYWORDS    RefSeq.
SOURCE      Algoriphagus oliviformis
  ORGANISM  Algoriphagus oliviformis
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Algoriphagus.
REFERENCE   1  (residues 1 to 516)
  AUTHORS   Pallanca,J.E. and Smirnoff,N.
  TITLE     Ascorbic acid metabolism in pea seedlings. A comparison of
            D-glucosone, L-sorbosone, and L-galactono-1,4-lactone as ascorbate
            precursors
  JOURNAL   Plant Physiol 120 (2), 453-462 (1999)
   PUBMED   10364396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019607.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07995.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Algoriphagus oliviformis"
                     /db_xref="taxon:2811231"
     Protein         1..516
                     /product="PQQ-dependent sugar dehydrogenase"
                     /calculated_mol_wt=57335
     Region          2..86
                     /region_name="Cytochrom_C"
                     /note="Cytochrome c; pfam00034"
                     /db_xref="CDD:459641"
     Region          <184..497
                     /region_name="YliI"
                     /note="Glucose/arabinose dehydrogenase, beta-propeller
                     fold [Carbohydrate transport and metabolism]; COG2133"
                     /db_xref="CDD:441736"
ORIGIN      
        1 mgkelfkqqc snchnfeqdg igpnlsgltr tvetewivef innpqakida kdpralalle
       61 kfkvamppfh algeekinsl lsylhtyetv qagepdsvvn lieagipdsg irlelelfaq
      121 lpasdsvppm akmtkmepip gtdrlmindq rvgiyqlvnq kpelylnlae qrpdlvskpg
      181 watglgsfvf hpdfvenglf ytahtepggt rpsdigytds ldvfmqwilt ewqakdpasl
      241 kfegssreml ridnpsqahg mqelafnpns kkgdedygll yigygdgasv ergfpaishn
      301 daqevyssil ridpagrnsr ngkygipasn pfantpgkag evyangfrnp nrifwdeqgn
      361 fyatdigqht ieelnrveag kfygwpireg afvinpygrl rrlfplpadd ekygitypli
      421 qlehdelaai fagyimgyge lkgkflfgdi lsgrlfvsdl sagpspkves llvvyegkem
      481 tleelvggrv dlkfgidadk rvfimskneg kvflik
//
LOCUS       WP_236021469            1972 aa            linear   BCT 02-MAR-2025
DEFINITION  OmpA family protein [Geomesophilobacter sediminis].
ACCESSION   WP_236021469
VERSION     WP_236021469.1
KEYWORDS    RefSeq.
SOURCE      Geomesophilobacter sediminis
  ORGANISM  Geomesophilobacter sediminis
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae;
            Geomesophilobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012894.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00691.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1972
                     /organism="Geomesophilobacter sediminis"
                     /db_xref="taxon:2798584"
     Protein         1..1972
                     /product="OmpA family protein"
                     /calculated_mol_wt=210941
     Region          168..>456
                     /region_name="MJ0795"
                     /note="S-layer protein MJ0795, predicted component of type
                     IV pili-like system [General function prediction only];
                     COG1361"
                     /db_xref="CDD:440972"
     Region          463..>518
                     /region_name="SdrD_B"
                     /note="SdrD B-like domain; pfam17210"
                     /db_xref="CDD:435789"
     Region          597..687
                     /region_name="Glyco_hydro2_C5"
                     /note="Glycoside hydrolase family 2 C-terminal domain 5;
                     pfam18565"
                     /db_xref="CDD:436582"
     Region          1704..1803
                     /region_name="OmpA_C-like"
                     /note="Peptidoglycan binding domains similar to the
                     C-terminal domain of outer-membrane protein OmpA; cd07185"
                     /db_xref="CDD:143586"
     Site            order(1706..1707,1740..1741,1744,1748..1749,1752,1795,
                     1799)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:143586"
ORIGIN      
        1 mwrsiwrgkg gllgavvala llltpaaalp ttpagtvvth scqlrygaap ttvssnetrv
       61 tvggicdlti apprnavshp gqavdflhti snqgnapdrf lltavhaggl pdgaspcrle
      121 fydkdgktkl pldttgaalt gtvaaggtld vilrvtppsg segrqmnlvv kavsqavptr
      181 ssslndqvai pvssfadptk svspagavlp gaaltytiaf atsdlpatgi vvtdqldpll
      241 nftagsaafs tgsvggtasf dpvtrtltfr lpnlaastga avtfqatvra dapfdaviln
      301 tanlssdqnp vpqasnttrt pvrgqplqli kgagvssaea gdiipytiqv knngavplnn
      361 vtvhdapprg frylkgssll dgstfadptp sggglfwnlg tlapgetrvl vyrmavstda
      421 pvgnnqnqaf afgttpggts taspnigatv lirasilgsk aiimgrvfid pngnglpdpg
      481 etgvagvriy lddgsfsftd plgqytftgv sagnhvvkid rstlprnlhp vpfntafagv
      541 gwsqfitvpf ggpargdfal keitvgpepp appappvppp papispagvg agpakkivvn
      601 pdrvdmpada ksvipftvei lnaegkrvag eslvtvrlgk geirepdadp kqpghqvrvh
      661 dgigvfhvra akspgadpit iqgagvqqtv dlffssplrd wilvgigslt vggrsvsshv
      721 eptdkddrfd sglfheerls fftrgkilgk ylvtaaydsg kerreglfqe idpekyypvy
      781 gdasdigyea psrgklyvkv eagrsyligg dyrtdlsene fsrydralng vklevnepgv
      841 ilrgfqssnk evvtrdefpg ngtsgyffls rtpvfenser vrietrdryh servlsvvek
      901 iryadysidy gagtilfkep vpaldknmnp itivvnyqse rggverqtyg gravvgsrag
      961 swfggtavve eqsvknntly gldgglkllg dqialkgega vsenlehgrg sawkaeafth
     1021 paqefnlggy yrkvdadfyn psmtgselgt tkyggkadyr lpsktlltae sfvekseitg
     1081 irlfgnqagf ahkfslwdte agykrieeea ggrngvsdiv yagvkgplta kldatlrreq
     1141 llapslvady qtktylrldy risertrafv aeeyqegapk qrqatlvgme sklsekmrls
     1201 tgyqlssgta gstsqgnvdl ntkvyeergl vidtrtgyqi qdslsaqrgq ailglnsrye
     1261 vskgllfsss lerietvqgh ggegtaftla geylrakelk vtgryeiksa pgeltslyaa
     1321 qaayklnesl tlvgksslwt rdadagddvv ydgyvgtawr piagnplhll tlarfkiddk
     1381 dsvpggphtk slvlsaeptf rmnkrwtlqg kyagklsfes sgpvgvqsyt dlalagvsyd
     1441 laekweltvy gkltsqyeag lhdfgvtgti gyrvyrnvvl mtgynyarld drdltgetfq
     1501 gqgpffgvkv kfdeemfehd eaevrpikep vraevpkaap pappvvpvvp avaivgvred
     1561 iplqisgsae lltllvngek prlpstevnl treildsvel sggklkrpir frtsvekpge
     1621 vkgwhfgild aqgrgiralk gegappeqlv wngetdgpal vkgeiyqyqm elvykdgsyv
     1681 atprglfgvs rkeavllsls ggafvfekwn ltdqarrllk eaarvlranp kekviveght
     1741 dgigtvpynv glskkrcdsa anylvrqegi peariirrwy gksrpiadna ttpgrrlnrr
     1801 veilgdfgrn vptlpdrfra kpfvvingtp lpldpdgrfa ttipadvgkl kvemgdssgr
     1861 glatvlpvps ldiaaptgar vvpfgvtrag ykvdtdghsa ctlaagtdpg nrveldgkll
     1921 vvdgkggfst elslvrgekv fgmvvrngag csrllnlkvr tapqelrgqs ep
//
LOCUS       WP_236021475             177 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Geomesophilobacter
            sediminis].
ACCESSION   WP_236021475
VERSION     WP_236021475.1
KEYWORDS    RefSeq.
SOURCE      Geomesophilobacter sediminis
  ORGANISM  Geomesophilobacter sediminis
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae;
            Geomesophilobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Geomesophilobacter sediminis"
                     /db_xref="taxon:2798584"
     Protein         1..177
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=20218
     Region          2..171
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(4..6,20,37..39)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133389"
ORIGIN      
        1 mmfritelar qfglsrstll yydrigllkp tgrseagyrm ysaadrerlq aicgfrsagl
       61 aigdiqrvle reensevsvl qkrmrelgee igvlrsqqrm iaqmlkvqat qetpvdkeaw
      121 iemlraagmd eaamfrwhae ferrapeahq qflvglgiga devreirrrs aeaaekr
//
LOCUS       WP_236021625             173 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6993 domain-containing protein [Leucobacter soli].
ACCESSION   WP_236021625
VERSION     WP_236021625.1
KEYWORDS    RefSeq.
SOURCE      Leucobacter soli
  ORGANISM  Leucobacter soli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Leucobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046846.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22504.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Leucobacter soli"
                     /db_xref="taxon:2812850"
     Protein         1..173
                     /product="DUF6993 domain-containing protein"
                     /calculated_mol_wt=18313
ORIGIN      
        1 mpelrslrst dgalgtalta tlvttlmtal vmvlsgcall gvespvaepa pgtvseepqe
       61 eavfypdgta ednlpyfsqr lrayaaddgp vegrsivdai vdagfarkrm qvsfdrtatd
      121 lvadsifvsv rigeecligq mltanrevav evapavgpkq rtcligetrp idw
//
LOCUS       WP_236021653             579 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein
            [Geomesophilobacter sediminis].
ACCESSION   WP_236021653
VERSION     WP_236021653.1
KEYWORDS    RefSeq.
SOURCE      Geomesophilobacter sediminis
  ORGANISM  Geomesophilobacter sediminis
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae;
            Geomesophilobacter.
REFERENCE   1  (residues 1 to 579)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Geomesophilobacter sediminis"
                     /db_xref="taxon:2798584"
     Protein         1..579
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=63325
     Region          50..269
                     /region_name="PBP2_HisK"
                     /note="The periplasmic sensor domain of histidine kinase
                     receptors; the type 2 periplasmic binding fold protein;
                     cd13704"
                     /db_xref="CDD:270422"
     Region          <328..575
                     /region_name="COG4191"
                     /note="Signal transduction histidine kinase regulating
                     C4-dicarboxylate transport system [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443345"
ORIGIN      
        1 mrftcekprf irphrlmrsw svplltlall llltplsgwa alpspgatpk qviviggdqn
       61 fppyefldrd gkpagfnvel sqaiaevmgm rvefrlgnwn earsalrdgs idvlqgvtws
      121 earsrefdfs pphnivntsv fgrrgarhia rleelrgkev ivqkggsmhd ylvahhigar
      181 lilvdthaaa lrllasgkhd yalvgnlpgl ylgkelglsn ivpvggpfgs gqygyavkkg
      241 ndeilsrfse glailkntgr yqqiygrwlg vlapqplplg kvaqyaaiva lplllilggt
      301 vlwsrtlqkr idehsaelqq rqqqliqadk maslgilvsg vaheinnptg lilfnlpvlk
      361 kayqaaqesl edrfqesgdf mvgglrystl reeaprlfde mhdgarrikr ivddlkdfar
      421 kddsaldetv dlnrvvetsv rllensirka trhfelnlap arpccrgsaq rieqvvvnli
      481 lnacqalsdp ekgisvatel sgteirvvvr dqgvgippeh lshltdpfft tkrdaggtgl
      541 glsvsagivk dhqgrlefss epgegttvlv alpvqgacs
//
LOCUS       WP_236021956             464 aa            linear   BCT 02-MAR-2025
DEFINITION  carbohydrate porin [Geomesophilobacter sediminis].
ACCESSION   WP_236021956
VERSION     WP_236021956.1
KEYWORDS    RefSeq.
SOURCE      Geomesophilobacter sediminis
  ORGANISM  Geomesophilobacter sediminis
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae;
            Geomesophilobacter.
REFERENCE   1  (residues 1 to 464)
  AUTHORS   Wylie,J.L. and Worobec,E.A.
  TITLE     The OprB porin plays a central role in carbohydrate uptake in
            Pseudomonas aeruginosa
  JOURNAL   J Bacteriol 177 (11), 3021-3026 (1995)
   PUBMED   7768797
REFERENCE   2  (residues 1 to 464)
  AUTHORS   Wylie,J.L., Bernegger-Egli,C., O'Neil,J.D. and Worobec,E.A.
  TITLE     Biophysical characterization of OprB, a glucose-inducible porin of
            Pseudomonas aeruginosa
  JOURNAL   J Bioenerg Biomembr 25 (5), 547-556 (1993)
   PUBMED   8132494
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016830.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04966.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Geomesophilobacter sediminis"
                     /db_xref="taxon:2798584"
     Protein         1..464
                     /product="carbohydrate porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /GO_process="GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /calculated_mol_wt=49544
     Region          140..464
                     /region_name="OprB"
                     /note="Carbohydrate-selective porin, OprB family; cl17816"
                     /db_xref="CDD:473095"
ORIGIN      
        1 mkmlsvavmi lallalvppl tayagrfaip ekveignaac gelarlgaky qidgifspef
       61 regkvcysrv elaaavvllt ekmadkvvke gpgsvdhadl vlvdelqeel raemllartr
      121 tfqqrnedlg tklhalskni smsgglvgvl qgslgnrptd hvdavgrgdl vfnfsvgekt
      181 iavidvestg gdgldrhign fskldnvags tgdrvrfrqa wvehtavndr itltagkidl
      241 tsyfdanava ndensqflag aftnspvlgv pdigpgarlq arlaesltfg igygagdasg
      301 sdvidhgygi aeldykvklg elegnyriyg sidgaradge nkllernavg ggvsfdqqvs
      361 gpvalffryg vrernayatr gawsaggqyt glipgrkddv lavaygqilp gvtasqekla
      421 elyykvklse qisitpvaqy linpegdrsr pdvktlgvrt qvtf
//
LOCUS       WP_236022089             163 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3515 family protein [Leucobacter soli].
ACCESSION   WP_236022089
VERSION     WP_236022089.1
KEYWORDS    RefSeq.
SOURCE      Leucobacter soli
  ORGANISM  Leucobacter soli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Leucobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023453.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12028.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Leucobacter soli"
                     /db_xref="taxon:2812850"
     Protein         1..163
                     /product="DUF3515 family protein"
                     /calculated_mol_wt=16688
     Region          14..149
                     /region_name="DUF3515"
                     /note="Protein of unknown function (DUF3515); pfam12028"
                     /db_xref="CDD:432272"
ORIGIN      
        1 mprpapiasv lssllaapal vlglagcage vpmtpaenan dpacadvivr lpqtlaglek
       61 rttnaqstga wgdpvgvqli cgetpsgptt ddcvsvndvd wiidrsqapl yrfeaygrtp
      121 glavyvdaer asgtdavasl gsiakvlpqe ractslidtl dld
//
LOCUS       WP_236022194             501 aa            linear   BCT 02-MAR-2025
DEFINITION  SLC13 family permease [Barrientosiimonas humi].
ACCESSION   WP_236022194
VERSION     WP_236022194.1
KEYWORDS    RefSeq.
SOURCE      Barrientosiimonas humi
  ORGANISM  Barrientosiimonas humi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Dermacoccaceae; Barrientosiimonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015557.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03600.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Barrientosiimonas humi"
                     /db_xref="taxon:999931"
     Protein         1..501
                     /product="SLC13 family permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=51888
     Region          <56..182
                     /region_name="CitT"
                     /note="Di- and tricarboxylate antiporter [Carbohydrate
                     transport and metabolism]; COG0471"
                     /db_xref="CDD:440239"
     Region          130..494
                     /region_name="CitT"
                     /note="Di- and tricarboxylate antiporter [Carbohydrate
                     transport and metabolism]; COG0471"
                     /db_xref="CDD:440239"
ORIGIN      
        1 msapvlhrtr pepapaapep gpgrpswlrp rlvvggvala llvlrlltlp vgsgpgdltt
       61 dgratlvifa vavvawaftp vddtyvalga gtalvllgvm pterffatlg ddvvwllvaa
      121 cviavavtas glaqrasawl vsgagsprql vhlvtaalvi tafavpstsg raalalpvfl
      181 alrgvlresh prlvrvlalt fptvillsav gsligagahl vtsmivesav gtgfdfsrwl
      241 llglplalvs shlaaelvll lfsrredrrv plrvrvadle erpgqltgal svaegraall
      301 lavtvvlwct edlhgvhpai ialgaalvat sprygvvrlk dalpqvpwsl llfmaatlal
      361 gnalldsgaa ryladglfgv lgvrtpgpfv vvvvlvstaa hlliqsrsar savivpivva
      421 lapgvgadva avafastaaa gfchtlpasa kpvamfarie dvetysaadl rrlslwlapl
      481 hvalvlvfaf fvwphlglpl t
//
LOCUS       WP_236022101             129 aa            linear   BCT 02-MAR-2025
DEFINITION  TadE/TadG family type IV pilus assembly protein [Leucobacter soli].
ACCESSION   WP_236022101
VERSION     WP_236022101.1
KEYWORDS    RefSeq.
SOURCE      Leucobacter soli
  ORGANISM  Leucobacter soli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Leucobacter.
REFERENCE   1  (residues 1 to 129)
  AUTHORS   Kachlany,S.C., Planet,P.J., DeSalle,R., Fine,D.H. and Figurski,D.H.
  TITLE     Genes for tight adherence of Actinobacillus actinomycetemcomitans:
            from plaque to plague to pond scum
  JOURNAL   Trends Microbiol 9 (9), 429-437 (2001)
   PUBMED   11553455
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019428.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07811.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Leucobacter soli"
                     /db_xref="taxon:2812850"
     Protein         1..129
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /calculated_mol_wt=13027
ORIGIN      
        1 mphsaaggrs drwarsapla ntrgavaaef vivmpalllv lllaigaill saqrvaltaa
       61 aaelvrlear gdrtaaqarl gslgdgttvs rsrdgpllcl tlrahpgaga laaveirama
      121 caavieaer
//
LOCUS       WP_236022216             426 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Barrientosiimonas humi].
ACCESSION   WP_236022216
VERSION     WP_236022216.1
KEYWORDS    RefSeq.
SOURCE      Barrientosiimonas humi
  ORGANISM  Barrientosiimonas humi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Dermacoccaceae; Barrientosiimonas.
REFERENCE   1  (residues 1 to 426)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 426)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 426)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 426)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Barrientosiimonas humi"
                     /db_xref="taxon:999931"
     Protein         1..426
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=44854
     Region          28..420
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mavavalagt lglascgdds ssgggtqtlt wyinpdvgna dpsaekggqa ylakvcsdas
       61 ggryrinvql lpnsasdqri qllrrlaagd rtmdlmsidp vfvpefaqag ylapvpeslt
      121 pqftqdrvrs avqastwdgk lvavpfwant qllwyrkska qqagldmsqp vtwdqliqaa
      181 rssgtdlgvq sslyegyvvw inaliagagg kivnnpgamg edvqlgidsp agreaariis
      241 tiakgglggp smstseetes ldlfkaggan ylvnwpytyg altgdksdva attyprtveg
      301 rnaappyggi qlgvgaesrn pdlayqaaac itneknqaty makagnpasr kssyqdpavl
      361 kafpngiaqt isrsldqavp rpqsqyygdi stglqqrfsp pssvtqqtpk taqnfiqdvl
      421 kgeall
//
LOCUS       WP_236022228             434 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase [Barrientosiimonas humi].
ACCESSION   WP_236022228
VERSION     WP_236022228.1
KEYWORDS    RefSeq.
SOURCE      Barrientosiimonas humi
  ORGANISM  Barrientosiimonas humi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Dermacoccaceae; Barrientosiimonas.
REFERENCE   1  (residues 1 to 434)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 434)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Barrientosiimonas humi"
                     /db_xref="taxon:999931"
     Protein         1..434
                     /product="phosphotransferase"
                     /calculated_mol_wt=45558
     Region          17..264
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(28..31,35,37,49,51,77,98..101,194,198..199,201,
                     211..212)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
ORIGIN      
        1 mlrrplvlaa ladaavpglr pievegqpvr sgapyqcvdv tgedgkrwtv raslttaaga
       61 avdsssalar llrprleval pevagvarts ddsivavypq lpgqalsfrd lqarsplars
      121 lgtviaqlhd ldpavydeag lptydaeavr arrlgdldra aatghvptgl larwerameg
      181 vtlwhfptvp thgtldetdv lvdgeqvtal dgwqsaavsd paadfallfl gaapdafdtv
      241 vesyaqarre rpdqhlerri rlaaelrlma dlmdaravgd ehlvarctra lrrldeqtal
      301 ddsltppppg rrpapaavse evdpddiesv dehpstddee tleipvagpd grpagaasee
      361 gdeggtvaad gtgdqesvea rqsdasaddv tsvghgdddv vgdedvatdd nrddastggg
      421 tgtgtdgpqa adhr
//
LOCUS       WP_236022257             273 aa            linear   BCT 02-MAR-2025
DEFINITION  ion channel [Barrientosiimonas humi].
ACCESSION   WP_236022257
VERSION     WP_236022257.1
KEYWORDS    RefSeq.
SOURCE      Barrientosiimonas humi
  ORGANISM  Barrientosiimonas humi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Dermacoccaceae; Barrientosiimonas.
REFERENCE   1  (residues 1 to 273)
  AUTHORS   Choe,S.
  TITLE     Potassium channel structures
  JOURNAL   Nat Rev Neurosci 3 (2), 115-121 (2002)
   PUBMED   11836519
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019500.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07885.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Barrientosiimonas humi"
                     /db_xref="taxon:999931"
     Protein         1..273
                     /product="ion channel"
                     /calculated_mol_wt=29741
     Region          <177..230
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
ORIGIN      
        1 mgadparplr tgctaaggpr prwqrwryyp navllgaqll gilvypftds elgravfslf
       61 qlgvlviavg avratpalnw vswvfgvpaa vltlvevvvr dnntisllsn vthaafyfyl
      121 ayalvrymfa drhvstdemf atgscftvva wafaylygav qnvwgpeqfs hagdgpltwm
      181 qmlflsfttm tgtglsdisp vggqarsivm leqlaglnyv alvvarllam tmarfhaegd
      241 advrrwrgda gtpprsdrat dtrtdtdtet dea
//
LOCUS       WP_236022286             644 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Barrientosiimonas humi].
ACCESSION   WP_236022286
VERSION     WP_236022286.1
KEYWORDS    RefSeq.
SOURCE      Barrientosiimonas humi
  ORGANISM  Barrientosiimonas humi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Dermacoccaceae; Barrientosiimonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Barrientosiimonas humi"
                     /db_xref="taxon:999931"
     Protein         1..644
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=68288
     Region          118..507
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(126..127,130..131,134,169,223..224,226..228,231,252,
                     255..256,259,336,339..340,343..345,348,377,381,433..434,
                     438,442,458,461..462,465..466,469)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mdqgsdrvta rtpapppgrr dphdrrdpta pqarrpdttr pmpgegrpgd gvrrgsadhd
       61 aappaahprr etaaaagrgl lrggkavgrv taragkgtvr marraseaqg agetglhrli
      121 qvhafssagd tavmvglagt lffqvpqgqa ksqvllflll tmlpfaivap ligplldrfr
      181 hgrrwsigat lalraflcwv lagsiteqst wqfpaalgvl vaskaylvtr ssatprllpd
      241 qltlvkangr lslagtvgag iggglaglaa qlgaewalkv gfvlfvigti lavllsprvd
      301 saqgeqqasm rdlvdesegg qrrgisgslv talranaglr wlsgfltiyl afllrehpfp
      361 gwedkgtlll alvigaagvg naigtmtgal vrtstpkviv latlladaiv avvtaarfnv
      421 ytavalalva gigqqmgkla ldaliqdtva erirtsvfar setllqlswv lgglvgvllp
      481 ttallgmtta avllvlwsva vviwnsgrhi pgprvgrrrr agdvsgerar pgeepayded
      541 damayggvgg grpgrynerg yrdewragdd rpatrpvpqp rdrgdyrtaa fadhdrggge
      601 gpyadeettq slrrdeswpr pprsgapdad drrdrwrsrf gdeh
//
LOCUS       WP_236022504             319 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Bifidobacterium phasiani].
ACCESSION   WP_236022504
VERSION     WP_236022504.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium phasiani
  ORGANISM  Bifidobacterium phasiani
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 319)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Bifidobacterium phasiani"
                     /db_xref="taxon:2834431"
     Protein         1..319
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=35569
     Region          34..306
                     /region_name="GH43_bXyl-like"
                     /note="Glycosyl hydrolase family 43 protein such as
                     Bacteroides thetaiotaomicron VPI-5482
                     alpha-L-arabinofuranosidases (BT3675;BT_3675) and
                     (BT3662;BT_3662); includes mostly xylanases; cd09004"
                     /db_xref="CDD:350118"
ORIGIN      
        1 mpeprvsraa apealphrvn dtvlatnplr rycadpnlav fdgryflyct ddgvddwgtt
       61 afsvyvsddl atwerhpald lrdvpwwsga dgawapsivk aadgryvmtf vadsqigaav
      121 adtpygpfva epepivrrge fdchtidpgt fvdddgtryf lwgngracia pyaddclgfd
      181 rdrvvswvpg dfreaiwihr ragvyyasws endardpeyc vkyamsesle gpwseprtlv
      241 eqdpghgiya tghhsivnip gtdewiiayh rfayhpggrw eggdgchrev vfaplvhred
      301 gsiepvrpqv gsyvrplaf
//
LOCUS       WP_236022553             208 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6466 family protein [Bifidobacterium phasiani].
ACCESSION   WP_236022553
VERSION     WP_236022553.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium phasiani
  ORGANISM  Bifidobacterium phasiani
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039464.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20070.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Bifidobacterium phasiani"
                     /db_xref="taxon:2834431"
     Protein         1..208
                     /product="DUF6466 family protein"
                     /calculated_mol_wt=21517
     Region          59..208
                     /region_name="DUF6466"
                     /note="Family of unknown function (DUF6466); pfam20070"
                     /db_xref="CDD:466280"
ORIGIN      
        1 msanasrtra rearpgaaar tartarapla vrialavaaa lllaaaavaa vnlyavytfn
       61 qataslnani aaasddatdl qmlqirqqqt daqfedagaf gflllpqvrs diehnaaass
      121 lltertiqev elqhdggdsa daaavgveda grgddakqgg glteeqrrqv eellqanqpa
      181 tsdqsatddg qsadngdgde qtsttkpw
//
LOCUS       WP_236022668             379 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3152 domain-containing protein [Bifidobacterium phasiani].
ACCESSION   WP_236022668
VERSION     WP_236022668.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium phasiani
  ORGANISM  Bifidobacterium phasiani
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11350.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Bifidobacterium phasiani"
                     /db_xref="taxon:2834431"
     Protein         1..379
                     /product="DUF3152 domain-containing protein"
                     /calculated_mol_wt=38405
     Region          222..370
                     /region_name="ZnMc"
                     /note="Zinc-dependent metalloprotease. This super-family
                     of metalloproteases contains two major branches, the
                     astacin-like proteases and the adamalysin/reprolysin-like
                     proteases. Both branches have wide phylogenetic
                     distribution, and contain sub-families, which...; cl00064"
                     /db_xref="CDD:469599"
ORIGIN      
        1 madsrcpddv vgriaaalrs aasdaltaar acadrarpvl ervarriaai laaaasaaar
       61 slraawgrll admrpgaesq asgassagep aggarrvflv rrivvlavaa lavvalvvav
      121 vcgvralsgn anagvaaqtg asgtngggds adgvggadtg ddgsdgdsdg tdgdgtdsgd
      181 danaadpsvp tpvtplsdae radilaraqs aaaasgnpqi eytyciatqg dvgeasdfet
      241 ivytalndpq gwpragatfv pgsdgvcgmt lilaspdqmt tfseecseey scrvgdsvvi
      301 nvtrwngatd ewlaaggtvd ryrvmvvnhe vghrlghfdn etvcggegqp aplmqqqsmg
      361 lqgcvpnewp lddelwvse
//
LOCUS       WP_236022686            2162 aa            linear   BCT 02-MAR-2025
DEFINITION  LPD25 domain-containing protein [Bifidobacterium phasiani].
ACCESSION   WP_236022686
VERSION     WP_236022686.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium phasiani
  ORGANISM  Bifidobacterium phasiani
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 2162)
  AUTHORS   Iyer,L.M., Burroughs,A.M., Anand,S., de Souza,R.F. and Aravind,L.
  TITLE     Polyvalent Proteins, a Pervasive Theme in the Intergenomic
            Biological Conflicts of Bacteriophages and Conjugative Elements
  JOURNAL   J Bacteriol 199 (15), e00245-17 (2017)
   PUBMED   28559295
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037425.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18840.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2162
                     /organism="Bifidobacterium phasiani"
                     /db_xref="taxon:2834431"
     Protein         1..2162
                     /product="LPD25 domain-containing protein"
                     /calculated_mol_wt=242804
     Region          2..100
                     /region_name="LPD15"
                     /note="Large polyvalent-protein-associated domain 15;
                     pfam18828"
                     /db_xref="CDD:408598"
     Region          322..491
                     /region_name="ArdA"
                     /note="Antirestriction protein (ArdA); cl01953"
                     /db_xref="CDD:470408"
     Region          724..>789
                     /region_name="Peptidase_M78"
                     /note="IrrE N-terminal-like domain; cl01076"
                     /db_xref="CDD:470062"
     Region          860..922
                     /region_name="LPD26"
                     /note="Large polyvalent protein associated domain 26;
                     pfam18842"
                     /db_xref="CDD:408612"
     Region          1033..1130
                     /region_name="LPD25"
                     /note="Large polyvalent protein associated domain 25;
                     pfam18840"
                     /db_xref="CDD:436774"
     Region          1960..2057
                     /region_name="YodL"
                     /note="YodL-like; pfam14191"
                     /db_xref="CDD:433761"
     Region          2062..2108
                     /region_name="DUF4316"
                     /note="Domain of unknown function (DUF4316); pfam14195"
                     /db_xref="CDD:433765"
ORIGIN      
        1 maslrdvvse yqddlrngia wlafwregrs wqaeafhldl ddtlypedra rlaeiqaadp
       61 qavvvngyys gylseemgvt elaagvrhhy dnglnnispf ieahsdelpp dmleeareka
      121 haaglpfyer pyrgddidpy tydghmsied yelmqklmeq dreqdrpkea vpleisnglm
      181 lidtsrtafd mqaiqnrrfm fspqtgelil grqyrgnalv kshaeehges gakapfdsfl
      241 rgwvgtgkdy kdgvihfapa idarnpeqfd hafstvemfa rngangktvi rgfgdvweqp
      301 lseliperse pmseifsill hnrqryeqgk eglwlalptt teklqealre igvsadnpqd
      361 fflydyrspq erpvklprdl vlsanvdeln flaarlekld aaelaelnaa ltspqsdfhs
      421 igqiidypdn vdfyvhlpdv tgtgqlgdyy lnrsgmvdmp eewkagiflp rfglhiante
      481 hgvftdygyl vksgdewqrv yegqpvpeey rvmaypqpea dreafrtepa apaavlpeag
      541 piiikgmtkd eymkeitdrl eagvrgvldg enykayltsm skfhtysfrn tmliflqkpd
      601 aslvaglgkw qsefertrkq geaglkiiap kfyavkkrva kkdpdtgepi kdkngkpvme
      661 eqeitvpdyr vvsvydvsqt egkelpkthv dmlsgdveqf qdlqaalers spyaisiepv
      721 ldgtkgrcfy leqriavnag mselqtlkta ihevaharly eknshlaedk qpdkatrevq
      781 aesvayavcq ywgldtsdys fgyianwssg rdlkelqasl etiraaandl inemeihlle
      841 lqqerqaqqe haapeqaaeq papdsvfakl ppeqqqemtd svkamlqtli dadvkatgev
      901 tqgtldaiqt qgfvlsddgt lqraeprqep qawngidgll nekplmpeas pveraaalva
      961 laekdgprlg dgerrlimey aeavgdtdkv ielinrlckq gfelqhgymd dfmksqmese
     1021 iavaraeqti andpasepiv tiiwsesphl kdgqqmplhe adaifralds skrlereqpd
     1081 ytggwydktk fridfsfqgq pdnyegrqdf gdgdgslieh irgyheyyaq deswknhvlk
     1141 hegpeawead kaqremllte fvpymelhcn lsrleqeaqt rlasgetltp eetayygale
     1201 nyvkecrpll nqgqyqlpep pklsdfdqsl qdykaqvqae iaqeaadagm tveeyaaagy
     1261 easaapepel apeeaqeppq qeapeqptke paasdyyysi negaarrake mssysdykpg
     1321 sataeyrhyv dnafeiaqaq kkrvdpmyhe kidslldtya rklaanmnhs yaidarvpsi
     1381 liaggsnfpv rqkekqnaar dsnmqewqyi qglldkirst gmggirqddp qaipklekkl
     1441 aglekaqetm kavnayyrkh gtldgcphls penleklkaa mvsgwhyekk pfqswelsnn
     1501 naeirrirqr idsltraret vyvgwefegg hveanreqsr lqvffedkpd adarqqlkeh
     1561 gfrwapsvga wqrllngnay yaadrissiq pltgekptel qrssirqqqa qmaqaqaepe
     1621 ecvyrvhaat rsdspenlyl lqayvpqadg tikigavlyg gteekcrell dqlntgeltq
     1681 eavkelyake qeqpqepape qeaapepepa peqeagpqak pmtdlqkkav eiagrykdlp
     1741 lqgkidiiaq afgcktgeir tspctgkwrg tsdmsihfdn gaslfignhl tpksktvkvq
     1801 tecvnsalvh fnpeivqatk eaalpvllqr eakdneiaaq kglkpytlln vefndgadeq
     1861 tggyigwyyv tlavdgkict hletglshdi adgkvsdtpt radyftagal ketdvdyvfn
     1921 nvgfssastl ytlplredvr eraeqtlaqr sadqperdtf siyqvpagpq grdfryrpye
     1981 elqaagltvd rknyalvyta pldkkttled iyrtfnaddr pagfrghsls vsdvvvvnrg
     2041 gkeeahycds igftpvpefm qespiktaem steqnynmid gvlnnapsmg elearakage
     2101 qislfdvaea akaedkkpkq trpasksaqr qkkpsiraql kaakeeqakk ppqrekskel
     2161 ev
//
LOCUS       WP_236022729             217 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Bifidobacterium phasiani].
ACCESSION   WP_236022729
VERSION     WP_236022729.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium phasiani
  ORGANISM  Bifidobacterium phasiani
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 217)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Bifidobacterium phasiani"
                     /db_xref="taxon:2834431"
     Protein         1..217
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=23305
     Region          4..200
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mgrdkttmai mdndrmaala lrsllsrtlp gyeilppvst gaeairiccd vhpptvllad
       61 iamndingpt vaktirkend stailaitss ivanhaedma kagaqgivgk nddlrlltla
      121 ittvatggiw pdeassahfd tvhdahrrvs sersadlsar eteivelwsr gltapriadn
      181 lgisettvrt hlqrathklg vstpkelisk wlelrtl
//
LOCUS       WP_236022844             160 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Dictyobacter formicarum].
ACCESSION   WP_236022844
VERSION     WP_236022844.1
KEYWORDS    RefSeq.
SOURCE      Dictyobacter formicarum
  ORGANISM  Dictyobacter formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Dictyobacteraceae; Dictyobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Dictyobacter formicarum"
                     /db_xref="taxon:2778368"
     Protein         1..160
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=18410
     Region          29..146
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 minqlllrlw kllrgrpqwy flwfvhskfi vgvsgvifde qgrilllrhr fwmqaawglp
       61 ggyanrnerl edtlrrevle etgysiqvts lirvvsgyrl rleasyrgtf lggreqldnr
      121 evlearffkp delpagllps qreiiklsls sppgppattt
//
LOCUS       WP_236022852            1019 aa            linear   BCT 02-MAR-2025
DEFINITION  family 78 glycoside hydrolase catalytic domain [Dictyobacter
            formicarum].
ACCESSION   WP_236022852
VERSION     WP_236022852.1
KEYWORDS    RefSeq.
SOURCE      Dictyobacter formicarum
  ORGANISM  Dictyobacter formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Dictyobacteraceae; Dictyobacter.
REFERENCE   1  (residues 1 to 1019)
  AUTHORS   Zverlov,V.V., Hertel,C., Bronnenmeier,K., Hroch,A., Kellermann,J.
            and Schwarz,W.H.
  TITLE     The thermostable alpha-L-rhamnosidase RamA of Clostridium
            stercorarium: biochemical characterization and primary structure of
            a bacterial alpha-L-rhamnoside hydrolase, a new type of inverting
            glycoside hydrolase
  JOURNAL   Mol Microbiol 35 (1), 173-179 (2000)
   PUBMED   10632887
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017410.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05592.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Dictyobacter formicarum"
                     /db_xref="taxon:2778368"
     Protein         1..1019
                     /product="family 78 glycoside hydrolase catalytic domain"
                     /calculated_mol_wt=113884
     Region          34..195
                     /region_name="Bac_rhamnosid_N"
                     /note="Alpha-L-rhamnosidase N-terminal domain; pfam08531"
                     /db_xref="CDD:400715"
     Region          440..511
                     /region_name="Bac_rhamnosid"
                     /note="Bacterial alpha-L-rhamnosidase concanavalin-like
                     domain; pfam05592"
                     /db_xref="CDD:336149"
     Region          537..932
                     /region_name="Bac_rhamnosid6H"
                     /note="Bacterial alpha-L-rhamnosidase 6 hairpin
                     glycosidase domain; cl46875"
                     /db_xref="CDD:481215"
     Region          938..1014
                     /region_name="Bac_rhamnosid_C"
                     /note="Bacterial alpha-L-rhamnosidase C-terminal domain;
                     pfam17390"
                     /db_xref="CDD:379972"
ORIGIN      
        1 mvfssdaswi wdegevsprn fwlrvrrsfr vasalrratl litadsryel fvngedvgng
       61 pvrsfpways ydeydvtawl rgageenvla vrvvhwgdht fqyirgrggl lcelvlefad
      121 grserissda swlvapdlvf drhtpriavq qafeeqydar qedgwqlagy qaedwrpati
      181 igpvgtapwh elvprgipfl trdvvlptqv laaelaqppa gyrwsfdlrh rvrdlglglr
      241 gedlgtrgva fvteivaeqd crvmlvqmsn adyegrgssc ngqllagele lhagrnlfvv
      301 agtewpalyf qtdaaltfda srllpadhea pwaylgpfde rdatysqlla asspeqlpav
      361 qataiaases medialltrg qhfalppagf caasiagpqp rqqlassgdv plveytsall
      421 hqnadytlly pqqegdvhli vdfgrelvgf pvldldapeg tivdanffeg idasgifwtd
      481 mlrntfrytc rfgrqtfrsh qrrgyryasl tfrfpasasa plklynvrtl lntypverrg
      541 sfacsdalls diwdvaaytv qlcmedtyvd cpayeqvfwv gdarnsalin avafgaydlt
      601 trcllltaqs lsrnldsikp ehlrkrahlt tdhvasgwfs eipmwtflwi wnvqehyqit
      661 gdhdvlaqly pavreclqrs leflsprgll nlpdvwnlvd wsamdltrdg evtssnallv
      721 eslrraaala evlaatrpeq eaelrsdats yrnaaeriyq ainaycwsee rgayvdtvrd
      781 eqgytyhqal aaeygtaldt cerflartri sehtntlill chcapadrre rilplveaar
      841 qgkfigsspa easkfpaeqi vpvgspwflf ftaetlfaqq rldavidlmr eqwgrmlekg
      901 attfwetfpn ltsphwsrsl chgwsaapay flstqvlgiq paapgysqvr iapqtsglqw
      961 argtvptphg disiswthhn atldldvhlp pgttgeivlp dasypitpgq sryslpqki
//
LOCUS       WP_236022527             391 aa            linear   BCT 02-MAR-2025
DEFINITION  excalibur calcium-binding domain-containing protein
            [Bifidobacterium phasiani].
ACCESSION   WP_236022527
VERSION     WP_236022527.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium phasiani
  ORGANISM  Bifidobacterium phasiani
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 391)
  AUTHORS   Rigden,D.J., Jedrzejas,M.J. and Galperin,M.Y.
  TITLE     An extracellular calcium-binding domain in bacteria with a distant
            relationship to EF-hands
  JOURNAL   FEMS Microbiol Lett 221 (1), 103-110 (2003)
   PUBMED   12694917
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017691.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05901.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Bifidobacterium phasiani"
                     /db_xref="taxon:2834431"
     Protein         1..391
                     /product="excalibur calcium-binding domain-containing
                     protein"
                     /calculated_mol_wt=43271
     Region          209..>337
                     /region_name="PRK09039"
                     /note="peptidoglycan -binding protein"
                     /db_xref="CDD:181619"
     Region          357..391
                     /region_name="Excalibur"
                     /note="Excalibur calcium-binding domain; pfam05901"
                     /db_xref="CDD:428664"
ORIGIN      
        1 mgtdewysvs fvekctidea rnctrvlysd vreyypvwkg ntlvltprpn cdvptvvvdf
       61 vqddegkkqh itvkvspkry gvktynefrk klrkglkeqa rgkkkletvs artvpertei
      121 etadgvdvnv hnianmfkpr srrnsadtva dsrqeelsaq rsefpqgdap asaeptatqe
      181 tveivpnsgm pvvramrhvk dayaayvplr vitimlivsl lvislltygf vargntidql
      241 nqtvanrdet iaelsnekds lqasldavep qrkaneaedk rlqelsdqlq sqktqqdqkq
      301 qeqdqrqsdl dtrqseldar eqslaareqa vaqseaqsyy gssstgssss ggsayyknca
      361 aaraagaapl yrgdpgyrsk ldadgdgiac e
//
LOCUS       WP_236022859             336 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase [Dictyobacter formicarum].
ACCESSION   WP_236022859
VERSION     WP_236022859.1
KEYWORDS    RefSeq.
SOURCE      Dictyobacter formicarum
  ORGANISM  Dictyobacter formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Dictyobacteraceae; Dictyobacter.
REFERENCE   1  (residues 1 to 336)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 336)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Dictyobacter formicarum"
                     /db_xref="taxon:2778368"
     Protein         1..336
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=37326
     Region          19..326
                     /region_name="AKR_AKR14A1_2"
                     /note="AKR14A family of aldo-keto reductase (AKR);
                     cd19089"
                     /db_xref="CDD:381315"
     Site            order(35..37,39,65,69..70,101,139,169,195,223..228,232,
                     234,282,299..303,307,310..311)
                     /site_type="active"
                     /db_xref="CDD:381315"
     Site            order(65,70,98,139)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381315"
ORIGIN      
        1 mseqdayqfa enrydsmlyr rsgrsglqlp aislgawetf ggyrgeeiar aclyrafdlg
       61 ithfdlanny grppgnaekv vgkvlkdmpr deliisskag yymwpgpygd glskkylvas
      121 ldqslkrlgl eyvdifyahr pdpetpleet maaldlivrq gkalyvgvsn fpgdhleqav
      181 qvtkqmgltp itihqpcynl lnrrcehnlf dhtvrngiga itfsplaqgl lsdkylggnl
      241 padsraaaww grknnedvvq getldklnrl naiakergqt laqmalawnl rlpavtsvli
      301 gaskveqide nvaalknldf sdeelkkine ivpctf
//
LOCUS       WP_236022908            1037 aa            linear   BCT 02-MAR-2025
DEFINITION  FHA domain-containing protein [Dictyobacter formicarum].
ACCESSION   WP_236022908
VERSION     WP_236022908.1
KEYWORDS    RefSeq.
SOURCE      Dictyobacter formicarum
  ORGANISM  Dictyobacter formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Dictyobacteraceae; Dictyobacter.
REFERENCE   1  (residues 1 to 1037)
  AUTHORS   Pallen,M., Chaudhuri,R. and Khan,A.
  TITLE     Bacterial FHA domains: neglected players in the phospho-threonine
            signalling game?
  JOURNAL   Trends Microbiol 10 (12), 556-563 (2002)
   PUBMED   12564991
REFERENCE   2  (residues 1 to 1037)
  AUTHORS   Durocher,D., Henckel,J., Fersht,A.R. and Jackson,S.P.
  TITLE     The FHA domain is a modular phosphopeptide recognition motif
  JOURNAL   Mol Cell 4 (3), 387-394 (1999)
   PUBMED   10518219
REFERENCE   3  (residues 1 to 1037)
  AUTHORS   Hofmann,K. and Bucher,P.
  TITLE     The FHA domain: a putative nuclear signalling domain found in
            protein kinases and transcription factors
  JOURNAL   Trends Biochem Sci 20 (9), 347-349 (1995)
   PUBMED   7482699
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012708.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00498.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Dictyobacter formicarum"
                     /db_xref="taxon:2778368"
     Protein         1..1037
                     /product="FHA domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=115025
     Region          13..102
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cd00060"
                     /db_xref="CDD:438714"
     Region          33..>176
                     /region_name="VI_FHA"
                     /note="type VI secretion system FHA domain protein;
                     TIGR03354"
                     /db_xref="CDD:274537"
     Site            order(35..36,50..51,53,72..73)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:438714"
     Region          184..277
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cd00060"
                     /db_xref="CDD:438714"
     Site            order(206..207,221..222,224,248..249)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:438714"
     Region          304..380
                     /region_name="FHA"
                     /note="Forkhead associated (FHA) domain, binds pSer, pThr,
                     pTyr [Signal transduction mechanisms]; COG1716"
                     /db_xref="CDD:441322"
     Region          396..618
                     /region_name="CcmA"
                     /note="ABC-type multidrug transport system, ATPase
                     component [Defense mechanisms]; COG1131"
                     /db_xref="CDD:440746"
     Region          410..942
                     /region_name="3a01204"
                     /note="The Eye Pigment Precursor Transporter (EPP) Family
                     protein; TIGR00955"
                     /db_xref="CDD:273361"
ORIGIN      
        1 metlqkpfae aavrflngpl tgkvfffqkp vvtlgrekqn diivpdlgis ryhvrmswlg
       61 dawrvenisq gnmlalneqq atqaqlhhnd viklsstvsf vfllrypetq qvpsaastpn
      121 anypvppapi sqvpqpsssq pslkqteias snnksqwpgl aqipnapdst vmahistgnv
      181 psllissntr serqvayltq qvsnigrdis neiiidtpiv sswhaqivre edklflvhph
      241 prrgktlngl wyqgqhirgd qvfrhqlqag difrigdehg tlvtltydag teapaenlpa
      301 mapivlqent ltigrtpdnm vvlnhpqvsa hhaivekvtg gyrlldqnst nhvyingeqv
      361 shkllrtgde irigpyrlty tgtelrpyde snhiriealh lkkagnnnvi llndislvip
      421 prkfvalvgg sgagkstlmd alnglrpaqe gvvlynevdy yrnlaafntq lgyvpqddiv
      481 hrdltveral yyaaklrlpg dftkeqiawr inevledvem terrhllvsk lsggqrkrvs
      541 ialellanpg vffldeptsg ldpgldrkmm allrrladrg rtivlvthat nnintcdyvc
      601 flaqggrlay fgppneaktf fektdfseiy saleptrdqp dipqkaeerf lnsadyqryi
      661 veplreqkvq sqpegttaqt pprkkqrskr rgqgwtqfml lsarylellr ndvgnlfill
      721 lqapviaiml vlmvrfevga gvfdankltq crtqiltssg plalpqaqrt elidcqqvlh
      781 flntdanakl fvqqkgsvaq alqsfliqgp gtdaqkvlfi mafatvlfgc ingareivke
      841 aaiyrrertv nlgilpymfs kivvlgllcl fqsailtlvv eigeplrqgv flspiletyi
      901 tlcltslagl migltisaia pnndraislv piillpqvif sgaiiplkdw vtqiiatifp
      961 trwamaalgs siglhadttg gdklfgddpt yhstlysiys qtdalhrlvl swvglgliti
     1021 lltiaigifl krkdart
//
LOCUS       WP_236022944             178 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Dictyobacter
            formicarum].
ACCESSION   WP_236022944
VERSION     WP_236022944.1
KEYWORDS    RefSeq.
SOURCE      Dictyobacter formicarum
  ORGANISM  Dictyobacter formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Dictyobacteraceae; Dictyobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024954.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13565.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Dictyobacter formicarum"
                     /db_xref="taxon:2778368"
     Protein         1..178
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=20107
     Region          36..>175
                     /region_name="transpos_IS630"
                     /note="IS630 family transposase; NF033545"
                     /db_xref="CDD:468076"
ORIGIN      
        1 makilraraa hdekeerwvr kmaasrhgpa dwifhakiva rswdsarvet iakeldcspq
       61 tvrrrlhrfd aegieglgdr pkagrprrlt teddsrilal arstppgkle rlsdgsldvr
      121 deqgaaqwsl dalaqaakea giqvkrsqir ricrregvrw rrthswgssd dknfvpkg
//
LOCUS       WP_236023038             165 aa            linear   BCT 02-MAR-2025
DEFINITION  alcohol dehydrogenase catalytic domain-containing protein
            [Dictyobacter formicarum].
ACCESSION   WP_236023038
VERSION     WP_236023038.1
KEYWORDS    RefSeq.
SOURCE      Dictyobacter formicarum
  ORGANISM  Dictyobacter formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Dictyobacteraceae; Dictyobacter.
REFERENCE   1  (residues 1 to 165)
  AUTHORS   Taneja,B. and Mande,S.C.
  TITLE     Conserved structural features and sequence patterns in the GroES
            fold family
  JOURNAL   Protein Eng 12 (10), 815-818 (1999)
   PUBMED   10556240
REFERENCE   2  (residues 1 to 165)
  AUTHORS   Murzin,A.G.
  TITLE     Structural classification of proteins: new superfamilies
  JOURNAL   Curr Opin Struct Biol 6 (3), 386-394 (1996)
   PUBMED   8804825
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08240.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Dictyobacter formicarum"
                     /db_xref="taxon:2778368"
     Protein         1..165
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /calculated_mol_wt=17258
     Region          4..>143
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
ORIGIN      
        1 mkaiqfthyg epaqvltvqd lplpepgege vrvrilaspi npsdllfvrg hyagvqphfp
       61 ssvgfegvgi gdalgpqvhg lvpgqrivvi ngtggnwaey vvapafsllp vpddlpdvqa
      121 atsiinpasa ilmlrhvlai prgrmaapis srlrtgtddh qagqa
//
LOCUS       WP_236023090             349 aa            linear   BCT 02-MAR-2025
DEFINITION  integrase core domain-containing protein [Dictyobacter formicarum].
ACCESSION   WP_236023090
VERSION     WP_236023090.1
KEYWORDS    RefSeq.
SOURCE      Dictyobacter formicarum
  ORGANISM  Dictyobacter formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Dictyobacteraceae; Dictyobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025063.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13683.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Dictyobacter formicarum"
                     /db_xref="taxon:2778368"
     Protein         1..349
                     /product="integrase core domain-containing protein"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=40999
     Region          34..317
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 mrwikpptts lalgtladlt rsktellaeh allrqqlvil hrqikrppyr ktdrlllvll
       61 armvrtwkqa lflvqpetll rwhrelfrlf wrrkmkaqar kpklspetis likemaahnr
      121 lwgaerirge llklairvsk rtiqkymrpi rrtrpsgqtw ktflrnhaae vwacdflqvt
      181 dlffrplfaf fiielksrkv ihvnvtrspt drwvaqqlre atpyrqtpky lirdndkkfg
      241 pnfarvatts gikvlrtpyr tpqanavcer flgsvrrecl dhcfifqekq lyrllkayvr
      301 yfnqarphqg lqqrlpdppe lsapppgqsg hvlsvpmlgg lhhdyqraa
//
LOCUS       WP_236023130             419 aa            linear   BCT 02-MAR-2025
DEFINITION  lactate racemase domain-containing protein [Dictyobacter
            formicarum].
ACCESSION   WP_236023130
VERSION     WP_236023130.1
KEYWORDS    RefSeq.
SOURCE      Dictyobacter formicarum
  ORGANISM  Dictyobacter formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Dictyobacteraceae; Dictyobacter.
REFERENCE   1  (residues 1 to 419)
  AUTHORS   Desguin,B., Goffin,P., Viaene,E., Kleerebezem,M.,
            Martin-Diaconescu,V., Maroney,M.J., Declercq,J.P., Soumillion,P.
            and Hols,P.
  TITLE     Lactate racemase is a nickel-dependent enzyme activated by a
            widespread maturation system
  JOURNAL   Nat Commun 5, 3615 (2014)
   PUBMED   24710389
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021387.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09861.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Dictyobacter formicarum"
                     /db_xref="taxon:2778368"
     Protein         1..419
                     /product="lactate racemase domain-containing protein"
                     /GO_function="GO:0050043 - lactate racemase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=46774
     Region          21..>303
                     /region_name="Lar_N"
                     /note="Lactate racemase N-terminal domain; cl15406"
                     /db_xref="CDD:472800"
ORIGIN      
        1 mlmdgygsvt qiltatdvqq iltrafaema ldgkrvlvli pdgtrtapip lmfralyeql
       61 gqrvaqldyl ialgthqpms eeaiaqlvgv saeerarsfp ktkiynhqws dpatlktigv
      121 itptearqlt egtlndevpv tlnrmifdyd qllicgpvfp hevagfsgga kylfpgiaga
      181 diinfshwlg arktsmatig vkdthvrrvi hraaefvnvp llclalvvkg pelhglycgs
      241 yreafeqaad lsgklnivyt erpfkrvlsm asehyddlwt aakamyktep aiadsgevii
      301 yaphitevsy thgklidqig yhvrdyflkq werfkdipgg ilahsthvkg sgtydlesgi
      361 erpriqvtla tgipeercrr inlgyldyrt lnlrdweqre degillvpna gevlyrltk
//
LOCUS       WP_236023185             169 aa            linear   BCT 02-MAR-2025
DEFINITION  CRISPR-associated ring nuclease [Dictyobacter formicarum].
ACCESSION   WP_236023185
VERSION     WP_236023185.1
KEYWORDS    RefSeq.
SOURCE      Dictyobacter formicarum
  ORGANISM  Dictyobacter formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Dictyobacteraceae; Dictyobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021162.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09623.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Dictyobacter formicarum"
                     /db_xref="taxon:2778368"
     Protein         1..169
                     /product="CRISPR-associated ring nuclease"
                     /calculated_mol_wt=18710
     Region          13..>165
                     /region_name="Csx1_III-U"
                     /note="CRISPR/Cas system-associated protein Csx1; cl09839"
                     /db_xref="CDD:447830"
ORIGIN      
        1 mhphvllatl ggqpqvvtft ldlllkefpi stvmvlhpst tteklqrsyn qlqaeftgdh
       61 ysaagrtihf rpqvlsmdge aiedivddlh adatletihq vitdlkrqgy hihlsvtggr
      121 rlmallaisv aalnfdrhdh iwhiytpeet vaqakngalm hvppkqasn
//
LOCUS       WP_236023220             178 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Dictyobacter
            formicarum].
ACCESSION   WP_236023220
VERSION     WP_236023220.1
KEYWORDS    RefSeq.
SOURCE      Dictyobacter formicarum
  ORGANISM  Dictyobacter formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Dictyobacteraceae; Dictyobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024954.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13565.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Dictyobacter formicarum"
                     /db_xref="taxon:2778368"
     Protein         1..178
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=20077
     Region          36..>175
                     /region_name="transpos_IS630"
                     /note="IS630 family transposase; NF033545"
                     /db_xref="CDD:468076"
ORIGIN      
        1 makilraraa hdekeerwvr kmaasrhgpa dwifhakiva rswdsarvet iakeldcspq
       61 tvrrrlhrfd aegieglgdr pkagrprrlt teddsrilal arstppgkle rlsdggldvr
      121 deqgaaqwsl dalaqaakea giqvkrsqir ricrregvrw rrthswgssd dknfvpkg
//
LOCUS       WP_236023230             205 aa            linear   BCT 02-MAR-2025
DEFINITION  nuclear transport factor 2 family protein [Dictyobacter
            formicarum].
ACCESSION   WP_236023230
VERSION     WP_236023230.1
KEYWORDS    RefSeq.
SOURCE      Dictyobacter formicarum
  ORGANISM  Dictyobacter formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Dictyobacteraceae; Dictyobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024966.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13577.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Dictyobacter formicarum"
                     /db_xref="taxon:2778368"
     Protein         1..205
                     /product="nuclear transport factor 2 family protein"
                     /calculated_mol_wt=23668
     Region          3..120
                     /region_name="NTF2_like"
                     /note="Nuclear transport factor 2 (NTF2-like) superfamily.
                     This family includes members of the NTF2 family,
                     Delta-5-3-ketosteroid isomerases, Scytalone Dehydratases,
                     and the beta subunit of Ring hydroxylating dioxygenases.
                     This family is a classic example of...; cl09109"
                     /db_xref="CDD:471850"
ORIGIN      
        1 mfdklavadl iqferlyrdq qqwerlrtmy hpdslirigw fvgtgdeyvd ashrleakkg
       61 gwhlthltgp tqvqvqgnra iaetntliir rsvlngvlad atiycrlhsr verrngewri
      121 ltldvvyekd tiipvypsdh lelnreelaq apaayrftsy nlknigysvr addlyatdhp
      181 ervaqlyrea edwlyasdta datnq
//
LOCUS       WP_236023239             114 aa            linear   BCT 02-MAR-2025
DEFINITION  SRPBCC domain-containing protein [Dictyobacter formicarum].
ACCESSION   WP_236023239
VERSION     WP_236023239.1
KEYWORDS    RefSeq.
SOURCE      Dictyobacter formicarum
  ORGANISM  Dictyobacter formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Dictyobacteraceae; Dictyobacter.
REFERENCE   1  (residues 1 to 114)
  AUTHORS   Stark,J.L., Mercier,K.A., Mueller,G.A., Acton,T.B., Xiao,R.,
            Montelione,G.T. and Powers,R.
  TITLE     Solution structure and function of YndB, an AHSA1 protein from
            Bacillus subtilis
  JOURNAL   Proteins 78 (16), 3328-3340 (2010)
   PUBMED   20818668
REFERENCE   2  (residues 1 to 114)
  AUTHORS   Lotz,G.P., Lin,H., Harst,A. and Obermann,W.M.
  TITLE     Aha1 binds to the middle domain of Hsp90, contributes to client
            protein activation, and stimulates the ATPase activity of the
            molecular chaperone
  JOURNAL   J Biol Chem 278 (19), 17228-17235 (2003)
   PUBMED   12604615
REFERENCE   3  (residues 1 to 114)
  AUTHORS   Panaretou,B., Siligardi,G., Meyer,P., Maloney,A., Sullivan,J.K.,
            Singh,S., Millson,S.H., Clarke,P.A., Naaby-Hansen,S., Stein,R.,
            Cramer,R., Mollapour,M., Workman,P., Piper,P.W., Pearl,L.H. and
            Prodromou,C.
  TITLE     Activation of the ATPase activity of hsp90 by the stress-regulated
            cochaperone aha1
  JOURNAL   Mol Cell 10 (6), 1307-1318 (2002)
   PUBMED   12504007
REFERENCE   4  (residues 1 to 114)
  AUTHORS   Sevier,C.S. and Machamer,C.E.
  TITLE     p38: A novel protein that associates with the vesicular stomatitis
            virus glycoprotein
  JOURNAL   Biochem Biophys Res Commun 287 (2), 574-582 (2001)
   PUBMED   11554768
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08327.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Dictyobacter formicarum"
                     /db_xref="taxon:2778368"
     Protein         1..114
                     /product="SRPBCC domain-containing protein"
                     /calculated_mol_wt=12747
     Region          <4..108
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
ORIGIN      
        1 mdfrvggaiq ftwenercpy pgvieviepe qrfafrwpsy avshpgltfa tapstlveit
       61 leeraegtll tlvesgfasl pqpipteeay rdnqdgwqec lnglraylqs qeiv
//
LOCUS       WP_236023243             392 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Dictyobacter formicarum].
ACCESSION   WP_236023243
VERSION     WP_236023243.1
KEYWORDS    RefSeq.
SOURCE      Dictyobacter formicarum
  ORGANISM  Dictyobacter formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Dictyobacteraceae; Dictyobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025052.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13671.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Dictyobacter formicarum"
                     /db_xref="taxon:2778368"
     Protein         1..392
                     /product="AAA family ATPase"
                     /calculated_mol_wt=44848
     Region          <34..192
                     /region_name="cca"
                     /note="multifunctional CCA addition/repair protein;
                     PRK10885"
                     /db_xref="CDD:182810"
     Region          250..390
                     /region_name="COG4639"
                     /note="Predicted kinase [General function prediction
                     only]"
                     /db_xref="CDD:443677"
ORIGIN      
        1 mihtpymqpp vqldtalfpf cpepagqwnl dwealqqqfs wlqamagvpq ypayhaegdv
       61 lihthmvtda lvqheqwrsl ptderqllfa aallhdvgkp actkiepdgm issrgharrg
      121 efitrrilwt gaelvtpvsf aqreyiarlv rlhglplqfl nrtspekavi easqsvrldh
      181 lallaeadvr gricadqvel lervelfrll cqeqacymap rtfasdysrf vylhstqgyp
      241 dyaayddtsf evvllsglpg vgkdywlqrh yttwpvisld airkelkvta lgdqghvvql
      301 arerargymr qkqsfvwnat nttrllrqql tdffisykar vhivyleapy dviikrnner
      361 sasipvaiin klldklevpd iteahqvewi nn
//
LOCUS       WP_236023111             495 aa            linear   BCT 02-MAR-2025
DEFINITION  MGDG synthase family glycosyltransferase [Dictyobacter formicarum].
ACCESSION   WP_236023111
VERSION     WP_236023111.1
KEYWORDS    RefSeq.
SOURCE      Dictyobacter formicarum
  ORGANISM  Dictyobacter formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Dictyobacteraceae; Dictyobacter.
REFERENCE   1  (residues 1 to 495)
  AUTHORS   Awai,K., Marechal,E., Block,M.A., Brun,D., Masuda,T., Shimada,H.,
            Takamiya,K., Ohta,H. and Joyard,J.
  TITLE     Two types of MGDG synthase genes, found widely in both 16:3 and
            18:3 plants, differentially mediate galactolipid syntheses in
            photosynthetic and nonphotosynthetic tissues in Arabidopsis
            thaliana
  JOURNAL   Proc Natl Acad Sci U S A 98 (19), 10960-10965 (2001)
   PUBMED   11553816
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018613.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06925.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Dictyobacter formicarum"
                     /db_xref="taxon:2778368"
     Protein         1..495
                     /product="MGDG synthase family glycosyltransferase"
                     /GO_function="GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009247 - glycolipid biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=55124
     Region          12..414
                     /region_name="PLN02605"
                     /note="monogalactosyldiacylglycerol synthase"
                     /db_xref="CDD:215325"
ORIGIN      
        1 msqlsdttqr tilfliadtg aghrsaanai snairlisqr eqeewiaqkq aavayadgat
       61 persqvstae iefppptyri eivdvfeeys rfplreavkl ygptirynpk lfgevfhrsn
      121 regtvmamts latplifngl lklfttiqpd vvvsihpiin fvtiralkql glqipfvtvv
      181 tdlisvhfsw fapgadayiv pteqakqlyl krkldpnrvh mlgmpidpky trevaskeel
      241 rqkfgliqdl pvvllvgggd gagglhaavr aisqarlpvq llvvtgrnkk lyaqlqrtrt
      301 rlhvpahifg fvnnmpelmh vsdvivtkag pgticealsc dlpiilsgyv pgqeegnidy
      361 vvhndvgala ldsrtltdel rrlikpgspe lrrrlanarv lsrpassfdi gdkilsflpe
      421 rgqpgvwlkq gahqvqrrms griqsairih rlhshlpkti akssvirrfa ktqdisnemp
      481 eqskrlshhn mkdri
//
LOCUS       WP_236023346             126 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: START-like domain-containing protein [Chitinophaga].
ACCESSION   WP_236023346
VERSION     WP_236023346.1
KEYWORDS    RefSeq.
SOURCE      Chitinophaga
  ORGANISM  Chitinophaga
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039344.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19569.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Chitinophaga"
                     /db_xref="taxon:79328"
     Protein         1..126
                     /product="START-like domain-containing protein"
                     /calculated_mol_wt=14977
     Region          1..125
                     /region_name="START_2"
                     /note="START-like superfamily domain; pfam19569"
                     /db_xref="CDD:437401"
ORIGIN      
        1 mskkvqyele ypvrcspsil yeflstpagl qewfadkvdf rdnvfsfswn gsteeaevme
       61 qeddefirlh wlhapkneff efriqisevt nmtilvirdf aekkevadqs qlwdyqikdl
      121 fhrign
//
LOCUS       WP_236023647             387 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Bifidobacterium miconis].
ACCESSION   WP_236023647
VERSION     WP_236023647.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium miconis
  ORGANISM  Bifidobacterium miconis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 387)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Bifidobacterium miconis"
                     /db_xref="taxon:2834435"
     Protein         1..387
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=42816
     Region          27..368
                     /region_name="GH43_62_32_68_117_130"
                     /note="Glycosyl hydrolase families: GH43, GH62, GH32,
                     GH68, GH117, CH130; cl14647"
                     /db_xref="CDD:449341"
ORIGIN      
        1 mpantpaves slthdvdaid vryplqmhdf slhdpfvlad kasglyylyn anyyqyrdaa
       61 hgrgksvvvy vspdlkhfse pvdvfdlndv pagawyddsd spwapevyer dgkywmfvtl
      121 hakretpepp hagpdwyvrd hgmqhrrgvf vavadrpagp frvadptrpt tpdnvmaldg
      181 tlafdtdgsp wmvyahewve lfdgtmeair ldpndlarsv gepvhlwsas egvwhpadgd
      241 apaggwrgdf ttdearatip ehsggyvtdg pyvartpngs lisvwtsysr geyilsqais
      301 rsgrvigpwe qlapidysda ghamvfrtfd gtlllimhtn mtrrgsdgtp ltphgivyev
      361 avtnegfrlg rhradldgia dpardda
//
LOCUS       WP_236023697             489 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Heyndrickxia sporothermodurans].
ACCESSION   WP_236023697
VERSION     WP_236023697.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia sporothermodurans
  ORGANISM  Heyndrickxia sporothermodurans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Heyndrickxia sporothermodurans"
                     /db_xref="taxon:46224"
     Protein         <1..489
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          16..417
                     /region_name="efflux_EmrB"
                     /note="drug resistance transporter, EmrB/QacA subfamily;
                     TIGR00711"
                     /db_xref="CDD:129794"
     Region          44..>143
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 ymrclnggll vnyhytrfge vllflslkpl dtqglrimkf ihliiiflcg siinaisqdl
       61 fflilgrtiq glsagvlflt mlpvslksfp nkirntflfm vitglfgata lgaffgsfsl
      121 svdawrwlyi lnivsavlcf ivgffglpkt eeheldqapv dktgiflytl ilvvlsfplc
      181 nlmdkgfssl yvwpffvvaf lllilflsid mkaesplipf rtlkaakpis gtvmaiashv
      241 llilaiagin gflrhnkdlp fhyllhfyiw ffigivvtai lktlfygmlg agkmgiigsl
      301 aviyvtlqwr vmgpevtlpt lyfqiallga gvsmvlvgga lgtafagnlh haslrsltlh
      361 strnfigaii tpmvgwflst qnelqygniq eylgengpea kseiaqlthr lmesglplsk
      421 aqsmasyeli antkkaailg ayhhlftiml vfacimlvas igkmvtgkgi glvkkepkvq
      481 vtsvkettv
//
LOCUS       WP_236023731             741 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Heyndrickxia sporothermodurans].
ACCESSION   WP_236023731
VERSION     WP_236023731.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia sporothermodurans
  ORGANISM  Heyndrickxia sporothermodurans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024867.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13476.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Heyndrickxia sporothermodurans"
                     /db_xref="taxon:46224"
     Protein         1..741
                     /product="AAA family ATPase"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /GO_process="GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /calculated_mol_wt=87827
     Region          30..>457
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          <256..>724
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
ORIGIN      
        1 mipwrvrfsg irdyiptvld lsgehdhvli sgpngagkst vtfcmggvly sskvdveglk
       61 snnlssdqtw rakidllfkn agkikvdapq yvqfrleieq kpgdpikref yieegdeidk
      121 werttkftsg gnlnfseykn qvfykyavdp dafyliwyqk evnqfaimhp eerfrifsem
      181 ngidriqknw eeskelvkdt eqslqeaesk qglnkmhlkq kkmeldryyn rnrrreegfn
      241 qyyrgikwle tyylnqidsl kvqieellan kkekmdakre seihfvekke eleqfrills
      301 elqnqedvlg qevqkinkql kdtnekidai seqiaeitkq vdriglsede vkvrlneaek
      361 kykeidtsik amvtkannls nqlndliskr aelsvkidqd kaqerkynel idtyhgsnai
      421 qtemdknnle iennkdrfrv lnekeqkiek eltllknnkv ynprqeqsir ffkanqievy
      481 plrelvelde tagqhdeyvf dtikytlfvn kkvfkapndl yhvslpnlip dktimqlpdk
      541 hlkvkdnlde clypyaikal wwvesffkee kplivngqlv dekgvrgpqe ekkiilsekv
      601 lqfqqvklek eltqieeekl qlnkdiqern nrnsilfsrk ellkeaeafl tkenerewrq
      661 sqyekvkkei eaienenrli qdglneqrts larweqsllt yrdyleiyqq frkeqakiee
      721 vqrlksilvg lnqnkkekti n
//
LOCUS       WP_236023747             386 aa            linear   BCT 02-MAR-2025
DEFINITION  GmrSD restriction endonuclease domain-containing protein
            [Bifidobacterium miconis].
ACCESSION   WP_236023747
VERSION     WP_236023747.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium miconis
  ORGANISM  Bifidobacterium miconis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 386)
  AUTHORS   Gao,H., Gong,X., Zhou,J., Zhang,Y., Duan,J., Wei,Y., Chen,L.,
            Deng,Z., Wang,J., Chen,S., Wu,G. and Wang,L.
  TITLE     Nicking mechanism underlying the DNA phosphorothioate-sensing
            antiphage defense by SspE
  JOURNAL   Nat Commun 13 (1), 6773 (2022)
   PUBMED   36351933
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 386)
  AUTHORS   Machnicka,M.A., Kaminska,K.H., Dunin-Horkawicz,S. and Bujnicki,J.M.
  TITLE     Phylogenomics and sequence-structure-function relationships in the
            GmrSD family of Type IV restriction enzymes
  JOURNAL   BMC Bioinformatics 16, 336 (2015)
   PUBMED   26493560
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019151.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07510.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Bifidobacterium miconis"
                     /db_xref="taxon:2834435"
     Protein         1..386
                     /product="GmrSD restriction endonuclease domain-containing
                     protein"
                     /calculated_mol_wt=40543
     Region          147..287
                     /region_name="DUF1524"
                     /note="Protein of unknown function (DUF1524); pfam07510"
                     /db_xref="CDD:462188"
     Region          351..386
                     /region_name="Excalibur"
                     /note="Excalibur calcium-binding domain; pfam05901"
                     /db_xref="CDD:428664"
ORIGIN      
        1 mpnrihlaar gsfaytqpak nptpmtapgf phmysifpyn rmpdistaiq evmimspysg
       61 qtqrsgrrra agivalalaa alglsactss lqpdgndqtt stgtnaggsl atdalaklpv
      121 kgrapktgys rdqfgaawad vdhngcdtrn dilnrdltdk tykagthdcv vatgtlndpy
      181 tgsvinfvrg qntsaavqid hvvalsdawq kgaqqltadq rrqlandpyn llavdgpsnq
      241 qksdgdaatw lpsnksyrcs yvarqigvka kyalwvtqae hdamanvlag cpsqtvpeda
      301 datssgsstd dakqnadqqs tsqgigqngt sadqqssnnt gdadesgtvt ykncdavraa
      361 gkaplrkgdp gysakldrdg ngvace
//
LOCUS       WP_236023782             424 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Bifidobacterium
            miconis].
ACCESSION   WP_236023782
VERSION     WP_236023782.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium miconis
  ORGANISM  Bifidobacterium miconis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 424)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 424)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 424)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 424)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Bifidobacterium miconis"
                     /db_xref="taxon:2834435"
     Protein         1..424
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=44418
     Region          <255..424
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            292..295
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213222"
     Site            349..358
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213222"
     Site            369..374
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213222"
     Site            377..380
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213222"
     Site            404..410
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213222"
ORIGIN      
        1 msdarnnddi yqtvresane saddskkddm ttdttdnatd erdettpaea tatgttgage
       61 qpadeaqdvq fsivfddddd nadaaesaad tttadddatv avdlanaadg laspasaddd
      121 atnaessada vsgnavigdv agvaaanaar vnetlalgkq ddavaqaaai pvdadhhgas
      181 addqslrlsv rldkelkagr eddkllkayp slafnkvtlt drksghntld rvsasfykgh
      241 lyavrvdgdd ervallglvt gmtrptdgav mnkslnvlei dpgellghrf glipqryavr
      301 ddlnaeqnvl yamdasgrtf lkpkpvlare llarvgfdad tpnvpagklp evqrrlvaia
      361 raiscdaevi iadeptggld addsvtvlkt llslthgdnk rcvvvltsdd evaevagsvt
      421 ylse
//
LOCUS       WP_236023820             134 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4235 domain-containing protein [Bifidobacterium miconis].
ACCESSION   WP_236023820
VERSION     WP_236023820.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium miconis
  ORGANISM  Bifidobacterium miconis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14019.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Bifidobacterium miconis"
                     /db_xref="taxon:2834435"
     Protein         1..134
                     /product="DUF4235 domain-containing protein"
                     /calculated_mol_wt=14200
     Region          41..125
                     /region_name="DUF4235"
                     /note="Protein of unknown function (DUF4235); pfam14019"
                     /db_xref="CDD:433648"
ORIGIN      
        1 mtdvqaessa dqiiavfdqi nekvdamrak rindpdslgd kflkfalpsv agfiagklft
       61 lawnhslgrn rkaaaptgaa dagslgdgvv dekeslmmsv lfsalssavg aavsqlsdrg
      121 sqaivdrrhr rrnr
//
LOCUS       WP_236023835             742 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-L-arabinofuranosidase C-terminal domain-containing protein
            [Bifidobacterium miconis].
ACCESSION   WP_236023835
VERSION     WP_236023835.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium miconis
  ORGANISM  Bifidobacterium miconis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 742)
  AUTHORS   Gilead,S. and Shoham,Y.
  TITLE     Purification and characterization of alpha-L-arabinofuranosidase
            from Bacillus stearothermophilus T-6
  JOURNAL   Appl Environ Microbiol 61 (1), 170-174 (1995)
   PUBMED   7887599
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018647.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06964.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..742
                     /organism="Bifidobacterium miconis"
                     /db_xref="taxon:2834435"
     Protein         1..742
                     /product="alpha-L-arabinofuranosidase C-terminal
                     domain-containing protein"
                     /GO_function="GO:0046556 - alpha-L-arabinofuranosidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0046373 - L-arabinose metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=81111
     Region          268..>579
                     /region_name="AbfA"
                     /note="Alpha-L-arabinofuranosidase [Carbohydrate transport
                     and metabolism]; COG3534"
                     /db_xref="CDD:442755"
     Region          532..698
                     /region_name="Alpha-L-AF_C"
                     /note="Alpha-L-arabinofuranosidase C-terminal domain;
                     pfam06964"
                     /db_xref="CDD:462053"
ORIGIN      
        1 mvtitvgapt havsdrlygv ffedinhgad gglnanmvnn ysfdgvylsh aslrlkgaer
       61 wmtkadplrf wrfrrldavs cgtwirgdhg qrvdtdcpap pindnsryar vtvepgtvga
      121 idnlgynggg eyanacamav raghaydfaa cvrpvrgavs lrvvvlddnd epltddvrfd
      181 vdrfageplr dgwvfvryal aglrdgygkl hidvqladrp gatrathate psavpepsaa
      241 tfdidavslm dadywgkddp kwrfgklrrd lvetiaalrp afvrfpggci vegvtpgney
      301 rwkdtvgast arrqqynmwa fktpdgssys qsyqigfyey fclcedlhak plptlfagit
      361 cqspyrdpkh vdtngdwfrn vvvqdyldli dfangdpdts awaavrrdmg hpepfgldmi
      421 gignenfgad yvakfdaiar aihekdpgml cvmsaglfpf rlpmkrtwdh ahavaaggvp
      481 gvareidand adllpatril vdehayhspd wfiaqanrfd dyrrdgtgvy fgeysangyf
      541 aaqpqdhdha sswrsalaea afltgcerns divkmtsyap llshvtghgw eqnliefnpa
      601 qvgpsvnyea erlfsanvga layecridge tpdglfvcat gdegalrfvk lvntggervg
      661 vtlnvsygpr gllrrsgaag sphtlrvetl tgdpdarnel gytgglrdcl thtvresvlp
      721 pdgpgsiala lppcsvtlvr la
//
LOCUS       WP_236023413              83 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: Ada metal-binding domain-containing protein
            [Chitinophaga].
ACCESSION   WP_236023413
VERSION     WP_236023413.1
KEYWORDS    RefSeq.
SOURCE      Chitinophaga
  ORGANISM  Chitinophaga
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae.
REFERENCE   1  (residues 1 to 83)
  AUTHORS   Sakashita,H., Sakuma,T., Ohkubo,T., Kainosho,M., Sakumi,K.,
            Sekiguchi,M. and Morikawa,K.
  TITLE     Folding topology and DNA binding of the N-terminal fragment of Ada
            protein
  JOURNAL   FEBS Lett 323 (3), 252-256 (1993)
   PUBMED   8500619
REFERENCE   2  (residues 1 to 83)
  AUTHORS   Myers,L.C., Terranova,M.P., Nash,H.M., Markus,M.A. and Verdine,G.L.
  TITLE     Zinc binding by the methylation signaling domain of the Escherichia
            coli Ada protein
  JOURNAL   Biochemistry 31 (19), 4541-4547 (1992)
   PUBMED   1581309
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014821.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02805.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Chitinophaga"
                     /db_xref="taxon:79328"
     Protein         1..83
                     /product="Ada metal-binding domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006281 - DNA repair [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=9632
     Region          <25..70
                     /region_name="Ada_Zn_binding"
                     /note="Metal binding domain of Ada; pfam02805"
                     /db_xref="CDD:460701"
ORIGIN      
        1 mhlflhkdld gpalrslmra gkirfagnrn lkiygrldcv sgkrmkrenr vffasersaq
       61 angyrpcgrc mreayrrwkr sae
//
LOCUS       WP_236023852             608 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphatase PAP2 family protein [Bifidobacterium miconis].
ACCESSION   WP_236023852
VERSION     WP_236023852.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium miconis
  ORGANISM  Bifidobacterium miconis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 608)
  AUTHORS   Neuwald,A.F.
  TITLE     An unexpected structural relationship between integral membrane
            phosphatases and soluble haloperoxidases
  JOURNAL   Protein Sci 6 (8), 1764-1767 (1997)
   PUBMED   9260289
REFERENCE   2  (residues 1 to 608)
  AUTHORS   Stukey,J. and Carman,G.M.
  TITLE     Identification of a novel phosphatase sequence motif
  JOURNAL   Protein Sci 6 (2), 469-472 (1997)
   PUBMED   9041652
REFERENCE   3  (residues 1 to 608)
  AUTHORS   Messerschmidt,A. and Wever,R.
  TITLE     X-ray structure of a vanadium-containing enzyme: chloroperoxidase
            from the fungus Curvularia inaequalis
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 392-396 (1996)
   PUBMED   8552646
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013718.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01569.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Bifidobacterium miconis"
                     /db_xref="taxon:2834435"
     Protein         1..608
                     /product="phosphatase PAP2 family protein"
                     /calculated_mol_wt=65359
     Region          <81..300
                     /region_name="PAP2_like"
                     /note="PAP2_like proteins, a super-family of histidine
                     phosphatases and vanadium haloperoxidases, includes type 2
                     phosphatidic acid phosphatase or lipid phosphate
                     phosphatase (LPP), Glucose-6-phosphatase,
                     Phosphatidylglycerophosphatase B and bacterial acid...;
                     cl00474"
                     /db_xref="CDD:469784"
     Site            order(174,181,231..233,266,272,276)
                     /site_type="active"
                     /db_xref="CDD:238813"
     Region          476..514
                     /region_name="DUF5648"
                     /note="Repeat of unknown function (DUF5648); pfam18885"
                     /db_xref="CDD:436806"
     Region          524..561
                     /region_name="DUF5648"
                     /note="Repeat of unknown function (DUF5648); pfam18885"
                     /db_xref="CDD:436806"
     Region          570..607
                     /region_name="DUF5648"
                     /note="Repeat of unknown function (DUF5648); pfam18885"
                     /db_xref="CDD:436806"
ORIGIN      
        1 mkhtiakrav lgtmasvatm amlacagita naadtypsda aqpdlvkllg dyenyykpan
       61 tydkndpskp fgkgtvanad vlknddamtq ainnaaaead segdgvktpt aqqqralvds
      121 dykmaetlpd algpvlgkyf seglkdgslp ktdellingg kslsadyldt gtakvtfnhp
      181 rpfvdrtdag yvaagldksv aikrvpvwts adgvkhdagy dgfltsgsfp sghttyaysg
      241 gialatlfpq lgpeivtras eagnnrivlg vhypldimgg ridgevanat rwsdasfrad
      301 klipaynelq symadrcvad ghatkqdkas dtvqqcvnnl ganagkgytn sfvdavskka
      361 vtdrqsaidv ftnrmtynfe qtgkagqdav vpegaenlli tafptltaaq rkavlaasei
      421 dsgypldass egyqrinlak afsakvtlak dgtvknvefg qseasvvsed dnavpvyrly
      481 dpstglhvyt sdeneknvls tkrgwknegv vfkaakksdd ttpvyrlyns knqrhvlssd
      541 eneikvlttk rgwknegiaw yqsdkgtvsv yrmyspkkge hlyttdaney kvnaskgwnq
      601 egvawkgl
//
LOCUS       WP_236023919             191 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6088 family protein [Flavobacterium flabelliforme].
ACCESSION   WP_236023919
VERSION     WP_236023919.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium flabelliforme
  ORGANISM  Flavobacterium flabelliforme
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040319.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19570.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Flavobacterium flabelliforme"
                     /db_xref="taxon:2816119"
     Protein         1..191
                     /product="DUF6088 family protein"
                     /calculated_mol_wt=21926
     Region          3..>93
                     /region_name="DUF6088"
                     /note="Family of unknown function (DUF6088); pfam19570"
                     /db_xref="CDD:437402"
ORIGIN      
        1 mnklqelkkh lkrgkvyrra dlskwsksvd rhldelvkeg tlqklsqgly sypeltafga
       61 appeeevlvr tflkdkrflv tsfnaynalg vgttqlynrk ivynhkrhgd fnlggktysf
      121 rvkphfplka ttdfllvdll nnldqlaedp kevlekvrlk vaamntkklk yslreygstr
      181 akkrlesill a
//
LOCUS       WP_236024140             322 aa            linear   BCT 02-MAR-2025
DEFINITION  TolC family protein [Comamonas suwonensis].
ACCESSION   WP_236024140
VERSION     WP_236024140.1
KEYWORDS    RefSeq.
SOURCE      Comamonas suwonensis
  ORGANISM  Comamonas suwonensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Comamonas.
REFERENCE   1  (residues 1 to 322)
  AUTHORS   Johnson,J.M. and Church,G.M.
  TITLE     Alignment and structure prediction of divergent protein families:
            periplasmic and outer membrane proteins of bacterial efflux pumps
  JOURNAL   J Mol Biol 287 (3), 695-715 (1999)
   PUBMED   10092468
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02321.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Comamonas suwonensis"
                     /db_xref="taxon:2606214"
     Protein         1..322
                     /product="TolC family protein"
                     /GO_function="GO:0015562 - efflux transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=35241
     Region          26..>307
                     /region_name="outer_NodT"
                     /note="efflux transporter, outer membrane factor (OMF)
                     lipoprotein, NodT family; TIGR01845"
                     /db_xref="CDD:273830"
ORIGIN      
        1 mttriapale ghprirqgwl ilglpillaa caqvpewsgk asltqpvpda lqaarntprm
       61 dwptqqwwqr ygdaqldqli aealetapdm aaaaarvrqa kamlgvresa sapqlsaras
      121 asedklsynh lspdaftprg mndygratld lswsldlwgk qraavaaavg elaareadaa
      181 qarlllssnv asayaqllrl aaneqtleqs ikvrqatanl faeryangle nkgsvhsana
      241 rlaaaraels qmqeqvalqr nsiaalmgaa pdrgahiqid tqrlqslwqq rwalpeqlsa
      301 nllgrrpvww rhgcrrsrwn ra
//
LOCUS       WP_236024172              51 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Comamonas suwonensis].
ACCESSION   WP_236024172
VERSION     WP_236024172.1
KEYWORDS    RefSeq.
SOURCE      Comamonas suwonensis
  ORGANISM  Comamonas suwonensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Comamonas.
REFERENCE   1  (residues 1 to 51)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 51)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..51
                     /organism="Comamonas suwonensis"
                     /db_xref="taxon:2606214"
     Protein         1..51
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=5795
     Region          <5..47
                     /region_name="XerD"
                     /note="Site-specific recombinase XerD [Replication,
                     recombination and repair]; COG4974"
                     /db_xref="CDD:443999"
ORIGIN      
        1 mnipdlrhea isrlfergys ieqvaqfslh eswaslkiyt hldpadvpel t
//
LOCUS       WP_236024302            1120 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase family protein [Comamonas suwonensis].
ACCESSION   WP_236024302
VERSION     WP_236024302.1
KEYWORDS    RefSeq.
SOURCE      Comamonas suwonensis
  ORGANISM  Comamonas suwonensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Comamonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04851.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Comamonas suwonensis"
                     /db_xref="taxon:2606214"
     Protein         1..1120
                     /product="DEAD/DEAH box helicase family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=126912
     Region          102..1035
                     /region_name="ResIII"
                     /note="Type III restriction endonuclease [Defense
                     mechanisms]; COG3421"
                     /db_xref="CDD:442647"
ORIGIN      
        1 marvtkttkn kkrsfhqelv lnrwvlgffq ggtlaalkmr lgddrfegid edgqtkffhe
       61 lirglfdpnk vpeadlrryd lnvvahwqai taqrnklegh elqmkyfqyl sllfselyld
      121 wyfnhrqdll nglneemtry raetgaepfr dfeaddlnki afwnatgsgk tlllhvnirq
      181 ylhyfqvgrs dhfpdkiill tpneglsrqh leelhlsgfg fsqffnkaqs pargtieiid
      241 inklgdemgd ktvavdafeg hnlvlvdegh rgtgtaagaw marrdalvrg gfafeysatf
      301 gqavakgmtv vaaeddiqkk rakmlfntts lrslddgqka qlalstedkr raritatrei
      361 yakcilfdys ykffyedgyg keslilnmng eayeqadnar kyftacllay yqqlwlwsth
      421 rdkltdfnie kplwvfvgnt vsgegsdile vvnfladfln seaqikswlt dmiadkaqil
      481 dakgnnifsg rftplmgfgg rvddlyadil lrvfnasgrq rlklvnikss kgelalrvgd
      541 aepfglinig ddagffgmae daeafdserd dfggalfgtl nnkdsrlnvl igsrkftegw
      601 sswrvstmgl lnmgqgegsq iiqlfgrgvr lkgkgfslkr tlpqdrpkgv hldklealni
      661 fgvrasymaa fkdylreegi tpsdevleld fptranlpkg klktlalkdg ykdnqklgfk
      721 rthfpwlyei paqfqdkiks phvvldlypr vealsskdkg aahttetrnk gklnqtlfpa
      781 fnwdrvylal qdyklqrsws nlrleqqkli dfcagaqdwy tlfipaaeln vttfadirkq
      841 enillrlltd ytdrfykalk tgyegqfydi thidenhgsm lklyqfeien sddgleyqak
      901 lealknlvad gkigeaskwn aphmvaisfd rhlfyplfsf dqdgdkdlvp lklkplglga
      961 psevtfvrdl eafynssegk eaigprslyl lrnadregkg lgfalagnfy pdfllwlvdd
     1021 vsgkqwltfv dpkglrnldl shpklglyke vktlettlaa qtktgeaplv lnafvlsptk
     1081 ftdllnvgdp tkkadlesrn vlfmedgasa ylkklfqvlv
//
LOCUS       WP_236024397             848 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Bifidobacterium pluvialisilvae].
ACCESSION   WP_236024397
VERSION     WP_236024397.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium pluvialisilvae
  ORGANISM  Bifidobacterium pluvialisilvae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 848)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..848
                     /organism="Bifidobacterium pluvialisilvae"
                     /db_xref="taxon:2834436"
     Protein         1..848
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=88504
     Region          17..152
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; pfam02018"
                     /db_xref="CDD:396553"
     Region          190..523
                     /region_name="GH43_XynD-like"
                     /note="Glycosyl hydrolase family 43 protein such as
                     Bacillus subtilis arabinoxylan arabinofuranohydrolase
                     (XynD;BsAXH-m23;BSU18160); cd09003"
                     /db_xref="CDD:350117"
     Site            order(283,344,400..401,466..467)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:350117"
     Region          544..681
                     /region_name="CBM6_xylanase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); many are
                     appended to glycoside hydrolase (GH) family 11 and GH43
                     xylanase domains; cd04084"
                     /db_xref="CDD:271150"
     Site            order(558,581..582,639,675)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:271150"
ORIGIN      
        1 mmpmgaetas aadggavnli angdfendta swksgtvwda skstitavsd dvhggskalk
       61 vtdrkstdag aiqslngkvt kgesytgsmw ikstedatfn fticsgngsg cgqiasaavk
      121 agvwteikgt atlggngdys npslvietvy gtgktgdftv ddvtltgkts epvvrpagta
      181 kaakrmgnsn piidywygad pwameyngrv yvyttgdatk inedgsltyd yeydadgnik
      241 dnsfadvkti nvlstddmvn wrnegyirva gdqgiakwag nswapavthk tidgkekffl
      301 yfangasgig vltadspvgp wrdergslli kwgtqassgv twlfdpavft dsdgtgylyy
      361 gggvpdgkke hpntarviql gddmistvgd aktidapamf edsgiakigd tyyysyctnf
      421 sheniidgnk igygniaymt skspmgpfty qgeimdnpsk ffsvggnnhh amvqlgnswy
      481 mvyhaqtvak eltdggnldk argyrnthvd pitinedgsi apitmtykgl dqvknldayp
      541 dggisastia wdsgiqdayd tksgvrvidl tsdnadgqkl gnindgewts lanvdfgkig
      601 agsitvnaaa kaggnievrl dsndtdpvat vkvpagdgss ytdytaalsg vtgvhnvfft
      661 fkaaqadesn pelfdiktyt fakadsepsv vpvsgvsvsl erdavkvges vlakasvspe
      721 nasdksvsws ssdekvatvd asgrvtavga gaatitatak dgsgvsgsvk ltvsagpsek
      781 pgggegpsgk psqnpsatvs gvdntsrrqa sdgsltrtgt avagifgiaa vlvsvgvvlt
      841 icrkrrls
//
LOCUS       WP_236024402             345 aa            linear   BCT 02-MAR-2025
DEFINITION  5'-nucleotidase [Bifidobacterium pluvialisilvae].
ACCESSION   WP_236024402
VERSION     WP_236024402.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium pluvialisilvae
  ORGANISM  Bifidobacterium pluvialisilvae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017953.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06189.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Bifidobacterium pluvialisilvae"
                     /db_xref="taxon:2834436"
     Protein         1..345
                     /product="5'-nucleotidase"
                     /GO_component="GO:0005737 - cytoplasm [Evidence IEA]"
                     /GO_function="GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /GO_function="GO:0000287 - magnesium ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009117 - nucleotide metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=38128
     Region          68..341
                     /region_name="5-nucleotidase"
                     /note="5'-nucleotidase; pfam06189"
                     /db_xref="CDD:461846"
ORIGIN      
        1 mtdgdfdrdf aynvhyntva taavddggii madlsrkalv igvssralfd leeangiydr
       61 dgvgpyeqyq qdhvdeplep gtafpfvsrl lkfndlfddp degvevvvls rnsprtglri
      121 mnsirhydla itravfrggm stfplmrefn malflsanad evknavgkgl paglvlpfng
      181 qhiaddgelr vafdfdgvla gdsserlfrr vqatdpehat krygehemmn adrplengpl
      241 eqllkglnrl qsaarastae hkpslrvylm tarsapaher airtleekgl avdeafflgg
      301 lnktpflnev qphiffddql snlenpalqi pavhipfgir nddaq
//
LOCUS       WP_236024638             505 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidylprolyl isomerase [Arenibaculum pallidiluteum].
ACCESSION   WP_236024638
VERSION     WP_236024638.1
KEYWORDS    RefSeq.
SOURCE      Arenibaculum pallidiluteum
  ORGANISM  Arenibaculum pallidiluteum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodospirillales; Azospirillaceae; Arenibaculum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012846.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00639.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Arenibaculum pallidiluteum"
                     /db_xref="taxon:2812559"
     Protein         1..505
                     /product="peptidylprolyl isomerase"
                     /EC_number="5.2.1.8"
                     /GO_function="GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /calculated_mol_wt=54194
     Region          110..503
                     /region_name="PRK10770"
                     /note="peptidyl-prolyl cis-trans isomerase SurA;
                     Provisional"
                     /db_xref="CDD:236758"
ORIGIN      
        1 mmpglcpdpn rqftsqkpmp anlpkcliri pvaaallaaa alpasaqfts patrsaqppa
       61 varpaapqaa pqaappaapq asrpaappaa aapapgappt amlrpppsga psmveriaav
      121 vndeivslsd learlqlall saglpdspea rqrlapqvlr qlvderlqlq eakrlnvrvt
      181 dkelddrlgr laqqnrmtqq qmgdflkarg ispvtlreqt raviswekli qrrlrpqvei
      241 gdeeidaylq riqanagkpe ylvaeiflav dspeqdeevh rladrlteqi vggasfsava
      301 rqfsqsavaa qggdlgwvqq dqlpgeldqa lrqlrpgqis rpirgisgyh llmlrdqrlv
      361 sagnpadakv tlkqlllprv anqdaeglra eaeklrpqlt gceamgekat algspqsgda
      421 gtlrlgdmpq elaqlvagln igepspplln esgamivmvc grelpagslp sreevlavlg
      481 terldmlqrr wlrdlrrsaf vdvrv
//
LOCUS       WP_236024814             454 aa            linear   BCT 02-MAR-2025
DEFINITION  M48 family metalloprotease [Arenibaculum pallidiluteum].
ACCESSION   WP_236024814
VERSION     WP_236024814.1
KEYWORDS    RefSeq.
SOURCE      Arenibaculum pallidiluteum
  ORGANISM  Arenibaculum pallidiluteum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodospirillales; Azospirillaceae; Arenibaculum.
REFERENCE   1  (residues 1 to 454)
  AUTHORS   Quigley,A., Dong,Y.Y., Pike,A.C., Dong,L., Shrestha,L.,
            Berridge,G., Stansfeld,P.J., Sansom,M.S., Edwards,A.M., Bountra,C.,
            von Delft,F., Bullock,A.N., Burgess-Brown,N.A. and Carpenter,E.P.
  TITLE     The structural basis of ZMPSTE24-dependent laminopathies
  JOURNAL   Science 339 (6127), 1604-1607 (2013)
   PUBMED   23539603
REFERENCE   2  (residues 1 to 454)
  AUTHORS   Pryor,E.E. Jr., Horanyi,P.S., Clark,K.M., Fedoriw,N.,
            Connelly,S.M., Koszelak-Rosenblum,M., Zhu,G., Malkowski,M.G.,
            Wiener,M.C. and Dumont,M.E.
  TITLE     Structure of the integral membrane protein CAAX protease Ste24p
  JOURNAL   Science 339 (6127), 1600-1604 (2013)
   PUBMED   23539602
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013594.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01435.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Arenibaculum pallidiluteum"
                     /db_xref="taxon:2812559"
     Protein         1..454
                     /product="M48 family metalloprotease"
                     /EC_number="3.4.24.-"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=49259
     Region          48..233
                     /region_name="M48C_Oma1-like"
                     /note="Oma1 peptidase-like, integral membrane
                     metallopeptidase; cd07324"
                     /db_xref="CDD:320683"
     Site            order(108..109,112,175,179,221)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:320683"
     Site            order(108,112,175,221)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:320683"
     Region          281..415
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          282..308
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(284..285,288..289,291,315,318..319,322..323,
                     325..326,349,352..353,356..357,360)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          313..343
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          348..377
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          385..415
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mdlrkvfrsv vaggmaavfl vmgaiapaea qqqrqlqfir daeiehtirv yaqplfeaaa
       61 idpdsveiai vkdqtlnafv aggmnlflht gllleaedpg eligviahei ghiagghlvr
      121 sreamegasa qailamllgv gaalasgesg agaavmtggt emarrsllaf srsqesaadq
      181 aglsyleqag fsarglekfl eklasqellp agqqsefvqt hpltrtrida vkaavarsrv
      241 sekpyprqfq dmhermrakl vgfinpvlal qrysaddpgi paryaraial yqrgdlktal
      301 piidglikee pqnpffqelk gqvllengrv reslapyrrs vellpesall rsalahalie
      361 tnddslleea vrnlneaaik errspftwrm lataygrrgn egmlayamae eaiargdrpk
      421 arfhaeraek llpagspgwi raqdirtaaa ktep
//
LOCUS       WP_236024591             154 aa            linear   BCT 02-MAR-2025
DEFINITION  head fiber protein [Bifidobacterium pluvialisilvae].
ACCESSION   WP_236024591
VERSION     WP_236024591.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium pluvialisilvae
  ORGANISM  Bifidobacterium pluvialisilvae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 154)
  AUTHORS   Tao,Y., Olson,N.H., Xu,W., Anderson,D.L., Rossmann,M.G. and
            Baker,T.S.
  TITLE     Assembly of a tailed bacterial virus and its genome release studied
            in three dimensions
  JOURNAL   Cell 95 (3), 431-437 (1998)
   PUBMED   9814712
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022583.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11133.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Bifidobacterium pluvialisilvae"
                     /db_xref="taxon:2834436"
     Protein         1..154
                     /product="head fiber protein"
                     /calculated_mol_wt=14634
     Region          <101..153
                     /region_name="Phage_head_fibr"
                     /note="Head fiber protein; pfam11133"
                     /db_xref="CDD:431670"
ORIGIN      
        1 mgnyedmpyv gdagraviaa ettdelnaai pgsgssatpa dgsitnamla ggitkdklaa
       61 gviptvpasp tadtlsgata tgkavlkatd aaaartaiga gtpytlpaat stalggvkkg
      121 vavpnladta tvadavrtvn ailtqlraag vias
//
LOCUS       WP_236024946             337 aa            linear   BCT 02-MAR-2025
DEFINITION  LptA/OstA family protein [Arenibaculum pallidiluteum].
ACCESSION   WP_236024946
VERSION     WP_236024946.1
KEYWORDS    RefSeq.
SOURCE      Arenibaculum pallidiluteum
  ORGANISM  Arenibaculum pallidiluteum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodospirillales; Azospirillaceae; Arenibaculum.
REFERENCE   1  (residues 1 to 337)
  AUTHORS   Sperandeo,P., Lau,F.K., Carpentieri,A., De Castro,C., Molinaro,A.,
            Deho,G., Silhavy,T.J. and Polissi,A.
  TITLE     Functional analysis of the protein machinery required for transport
            of lipopolysaccharide to the outer membrane of Escherichia coli
  JOURNAL   J Bacteriol 190 (13), 4460-4469 (2008)
   PUBMED   18424520
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015901.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03968.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Arenibaculum pallidiluteum"
                     /db_xref="taxon:2812559"
     Protein         1..337
                     /product="LptA/OstA family protein"
                     /calculated_mol_wt=34435
     Region          77..167
                     /region_name="LptA"
                     /note="Lipopolysaccharide export system protein LptA [Cell
                     wall/membrane/envelope biogenesis]; COG1934"
                     /db_xref="CDD:441537"
     Region          176..308
                     /region_name="LptA"
                     /note="Lipopolysaccharide export system protein LptA [Cell
                     wall/membrane/envelope biogenesis]; COG1934"
                     /db_xref="CDD:441537"
ORIGIN      
        1 mmapglrlga vlaaaalavt lgssagwtpa faqqpaaraq qqapaaeqgp garpaapppa
       61 patapvpggl gggkslpiav dadnaiewhq eqkayvargn avatrgdlsv aapvliayyr
      121 eiaqggteiy rlaadggvri ktptqevqgd ravydidqqv avvtggnlkl ttprdvvtar
      181 dsleywegrq lavargdava vrernkvqad llvgqfaett pgqlemermd aqgnvtittp
      241 tdiargregt ynlrteiatl tgnvrltrgp nqlvgdaaev nmrtgvsrlv tlaagqggta
      301 garvrglflp gqqpgqaapa papnqgapsg gasgapr
//
LOCUS       WP_236024949             407 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent monooxygenase [Arenibaculum pallidiluteum].
ACCESSION   WP_236024949
VERSION     WP_236024949.1
KEYWORDS    RefSeq.
SOURCE      Arenibaculum pallidiluteum
  ORGANISM  Arenibaculum pallidiluteum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodospirillales; Azospirillaceae; Arenibaculum.
REFERENCE   1  (residues 1 to 407)
  AUTHORS   Schreuder,H.A., van der Laan,J.M., Swarte,M.B., Kalk,K.H., Hol,W.G.
            and Drenth,J.
  TITLE     Crystal structure of the reduced form of p-hydroxybenzoate
            hydroxylase refined at 2.3 A resolution
  JOURNAL   Proteins 14 (2), 178-190 (1992)
   PUBMED   1409567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01494.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Arenibaculum pallidiluteum"
                     /db_xref="taxon:2812559"
     Protein         1..407
                     /product="FAD-dependent monooxygenase"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /calculated_mol_wt=44221
     Region          18..355
                     /region_name="PRK08163"
                     /note="3-hydroxybenzoate 6-monooxygenase"
                     /db_xref="CDD:181262"
ORIGIN      
        1 mtgklrvgiv gggiggvala gsllqrgfev rvferapafg eigagiqmtp navkvmkalg
       61 lleklqaagf lpralvgrnw rtarenfrtp lidtcpvlyd apfihihrad lhailaslvp
      121 esvatfgvsc tgirqeknsa valfddgsay eadlivgadg vrsavrsalf gaeaprftgh
      181 mcyravvpvd gvvdfvspda sfwfgpkshv vtyyvrggka vnivavaets awveeswnap
      241 stkeemlgaf qgwhrnvetl fqrvdqvfkw glfdrdpmtt wsqgrvtllg daahpmlpfl
      301 sqgaamaied ayvlaaaldg hgsdvpsalr dyeaerlprt srvqlearer grtyhlpspl
      361 aqakrdfiyw lrglinpqat giqanwvyay darafrpgvp sqprlva
//
LOCUS       WP_236025084             154 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphoenolpyruvate hydrolase family protein [Arenibaculum
            pallidiluteum].
ACCESSION   WP_236025084
VERSION     WP_236025084.1
KEYWORDS    RefSeq.
SOURCE      Arenibaculum pallidiluteum
  ORGANISM  Arenibaculum pallidiluteum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodospirillales; Azospirillaceae; Arenibaculum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020927.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09370.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Arenibaculum pallidiluteum"
                     /db_xref="taxon:2812559"
     Protein         1..154
                     /product="phosphoenolpyruvate hydrolase family protein"
                     /calculated_mol_wt=16212
     Region          <22..>126
                     /region_name="PEP_hydrolase"
                     /note="Phosphoenolpyruvate hydrolase-like; cl15424"
                     /db_xref="CDD:472806"
ORIGIN      
        1 mlpvldvnga lraalesrrp frssppivgi facdpflrva dmaktlhgag idevvnyptv
       61 qcyegetaaa masvgyraea efrvllqfre rgfapvacvm slraaeaalt lglrrilihp
      121 glsspgdaaa lwtelaghva veggeplgwr paas
//
LOCUS       WP_236025308             418 aa            linear   BCT 02-MAR-2025
DEFINITION  NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
            domain-containing protein [Arenibaculum pallidiluteum].
ACCESSION   WP_236025308
VERSION     WP_236025308.1
KEYWORDS    RefSeq.
SOURCE      Arenibaculum pallidiluteum
  ORGANISM  Arenibaculum pallidiluteum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodospirillales; Azospirillaceae; Arenibaculum.
REFERENCE   1  (residues 1 to 418)
  AUTHORS   Spehr,V., Schlitt,A., Scheide,D., Guenebaut,V. and Friedrich,T.
  TITLE     Overexpression of the Escherichia coli nuo-operon and isolation of
            the overproduced NADH:ubiquinone oxidoreductase (complex I)
  JOURNAL   Biochemistry 38 (49), 16261-16267 (1999)
   PUBMED   10587449
REFERENCE   2  (residues 1 to 418)
  AUTHORS   Friedrich,T. and Weiss,H.
  TITLE     Modular evolution of the respiratory NADH:ubiquinone oxidoreductase
            and the origin of its modules
  JOURNAL   J Theor Biol 187 (4), 529-540 (1997)
   PUBMED   9299297
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022059.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10589.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Arenibaculum pallidiluteum"
                     /db_xref="taxon:2812559"
     Protein         1..418
                     /product="NADH-ubiquinone oxidoreductase-F iron-sulfur
                     binding region domain-containing protein"
                     /GO_function="GO:0051539 - 4 iron, 4 sulfur cluster
                     binding [Evidence IEA]"
                     /calculated_mol_wt=43590
     Region          61..412
                     /region_name="NuoF"
                     /note="NADH:ubiquinone oxidoreductase, NADH-binding 51 kD
                     subunit (chain F) [Energy production and conversion];
                     COG1894"
                     /db_xref="CDD:441498"
ORIGIN      
        1 mapemttnlv ltapehrvga dldawlsgsg glglrlalet psglislmea aglrglggag
       61 fptfrkwaaa aaepdpekvv vcngnedepg tfkdvfllre tphqviegal iaglairarr
      121 vvlyvnphar gafdavakav aqwqehplla avgaavggpl rleamrspgl yiggeetavv
      181 saveggfpfp rrkppfpaas gvgghptvin nvetlatvsh ivrhgaawyr glgrngaagt
      241 klfslsgdvq rpglyelpmg tplselifvh gggmllgkef kavftggpsn tlltrdeldv
      301 pmdfesvrar gsrlgtgami vvsegtsivr kvaeyvnffa agscgqcppc ktgsyqlahl
      361 lqridtglat radldavehl cdllpgsgrc glidgavtvv asslqrfrse yegqlagg
//
LOCUS       WP_236025349             413 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Arenibaculum pallidiluteum].
ACCESSION   WP_236025349
VERSION     WP_236025349.1
KEYWORDS    RefSeq.
SOURCE      Arenibaculum pallidiluteum
  ORGANISM  Arenibaculum pallidiluteum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodospirillales; Azospirillaceae; Arenibaculum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Arenibaculum pallidiluteum"
                     /db_xref="taxon:2812559"
     Protein         1..413
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=42305
     Region          14..397
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(25..26,29..30,33,68,115..116,118..120,123,147,
                     150..151,154,228,231..232,235..237,240,270,274,323..324,
                     328,332,348,351..352,355..356,359)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340913"
ORIGIN      
        1 memaadgvtd spaawrrlal avvasaiggv gmwsvvvvlp aveaefgvar agaalpyslt
       61 migfafggvl mgrladrfgv avplalgava lalgyvlsaf atgivefaai qglligmlga
      121 sasfspllad ithwferrrg favaicasgs ylagtawppv vqhfvstagw rathvgigif
      181 clvtllplai amrrrvgvgp aigagaapgg alaagaglsp ralqallvva glaccvamam
      241 pqvhivaycg dlgygaarga emlslmlgfg iisriasgwv adrigglstl llgstlqgva
      301 lflylwfdgl tslyvisalf glfqggivps yalvvreffp pgeagtrvgv vimatlfgma
      361 lggwmsglif dvtgsygaaf vnglgwnlln vsiaawllqr rrrilarpde vts
//
LOCUS       WP_236025355              30 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Arenibaculum pallidiluteum].
ACCESSION   WP_236025355
VERSION     WP_236025355.1
KEYWORDS    RefSeq.
SOURCE      Arenibaculum pallidiluteum
  ORGANISM  Arenibaculum pallidiluteum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodospirillales; Azospirillaceae; Arenibaculum.
REFERENCE   1  (residues 1 to 30)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..30
                     /organism="Arenibaculum pallidiluteum"
                     /db_xref="taxon:2812559"
     Protein         1..>30
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>30
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 makakfernk phcnvgtigh vdhgktslta
//
LOCUS       WP_236025361             193 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase large subunit domain-containing protein [Heyndrickxia
            sporothermodurans].
ACCESSION   WP_236025361
VERSION     WP_236025361.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia sporothermodurans
  ORGANISM  Heyndrickxia sporothermodurans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
REFERENCE   1  (residues 1 to 193)
  AUTHORS   Baumann,R.G. and Black,L.W.
  TITLE     Isolation and characterization of T4 bacteriophage gp17 terminase,
            a large subunit multimer with enhanced ATPase activity
  JOURNAL   J Biol Chem 278 (7), 4618-4627 (2003)
   PUBMED   12466275
REFERENCE   2  (residues 1 to 193)
  AUTHORS   Lang,A.S., Taylor,T.A. and Beatty,J.T.
  TITLE     Evolutionary implications of phylogenetic analyses of the gene
            transfer agent (GTA) of Rhodobacter capsulatus
  JOURNAL   J Mol Evol 55 (5), 534-543 (2002)
   PUBMED   12399927
REFERENCE   3  (residues 1 to 193)
  AUTHORS   Mitchell,M.S., Matsuzaki,S., Imai,S. and Rao,V.B.
  TITLE     Sequence analysis of bacteriophage T4 DNA packaging/terminase genes
            16 and 17 reveals a common ATPase center in the large subunit of
            viral terminases
  JOURNAL   Nucleic Acids Res 30 (18), 4009-4021 (2002)
   PUBMED   12235385
REFERENCE   4  (residues 1 to 193)
  AUTHORS   Lang,A.S. and Beatty,J.T.
  TITLE     The gene transfer agent of Rhodobacter capsulatus and 'constitutive
            transduction' in prokaryotes
  JOURNAL   Arch Microbiol 175 (4), 241-249 (2001)
   PUBMED   11382219
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015211.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03237.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Heyndrickxia sporothermodurans"
                     /db_xref="taxon:46224"
     Protein         1..193
                     /product="terminase large subunit domain-containing
                     protein"
                     /calculated_mol_wt=22039
     Region          8..>165
                     /region_name="17"
                     /note="large terminase protein; Provisional; PHA02533"
                     /db_xref="CDD:222858"
ORIGIN      
        1 mavknknkkl qkvlddprlf fknfikivdn ngdtipfvmn peqeqfteem tkyniilkgr
       61 qigfttwsla ymlysacikp dtnylmmthh nkvtqsllrr inkmyaslph ekygdlfpkk
      121 lisnrdeiyf engsriqvat aggedsisgn tfelihlsem akyaneaqee iiatsipalg
      181 qedkesnhps lkv
//
LOCUS       WP_236025393             242 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3164 family protein [Flavobacterium geliluteum].
ACCESSION   WP_236025393
VERSION     WP_236025393.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium geliluteum
  ORGANISM  Flavobacterium geliluteum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022807.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11363.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Flavobacterium geliluteum"
                     /db_xref="taxon:2816120"
     Protein         1..242
                     /product="DUF3164 family protein"
                     /calculated_mol_wt=26728
     Region          21..213
                     /region_name="DUF3164"
                     /note="Protein of unknown function (DUF3164); pfam11363"
                     /db_xref="CDD:431842"
ORIGIN      
        1 mmttetqqpk nltdytpael kaalakvesk kdndrqayke lveqavpkai ftlcaasemi
       61 snaktnafkf fedilklkad vygikekqqs htfsckggei tigfrvtdgw ddtvsagiak
      121 vekyisslat nestaalvei vfnllkkdak gnlkgsrvle lqqltkkfdd eeftdgvnii
      181 sdaykpirsv wyieanligd dgtktpipls issvdfsqgy kfefnknekh nntaisdtad
      241 tv
//
LOCUS       WP_236025383             926 aa            linear   BCT 02-MAR-2025
DEFINITION  RICIN domain-containing protein [Flavobacterium geliluteum].
ACCESSION   WP_236025383
VERSION     WP_236025383.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium geliluteum
  ORGANISM  Flavobacterium geliluteum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025563.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14200.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..926
                     /organism="Flavobacterium geliluteum"
                     /db_xref="taxon:2816120"
     Protein         1..926
                     /product="RICIN domain-containing protein"
                     /calculated_mol_wt=98643
     Region          <198..267
                     /region_name="Reprolysin_3"
                     /note="Metallo-peptidase family M12B Reprolysin-like;
                     pfam13582"
                     /db_xref="CDD:463926"
     Region          <255..302
                     /region_name="ZnMc"
                     /note="Zinc-dependent metalloprotease. This super-family
                     of metalloproteases contains two major branches, the
                     astacin-like proteases and the adamalysin/reprolysin-like
                     proteases. Both branches have wide phylogenetic
                     distribution, and contain sub-families, which...; cl00064"
                     /db_xref="CDD:469599"
     Site            order(256..257,260,266)
                     /site_type="active"
                     /db_xref="CDD:239801"
     Region          471..553
                     /region_name="Crystall"
                     /note="Beta/Gamma crystallin; cl02528"
                     /db_xref="CDD:470604"
     Region          563..696
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cd00161"
                     /db_xref="CDD:467293"
     Site            order(577..579,590,592,599..600)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(624..625,637,639,646..647)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(671..673,684,686,693..694)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Region          710..830
                     /region_name="CBM6_cellulase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); appended to
                     glycoside hydrolase (GH) domains, including GH5
                     (cellulase); cd04080"
                     /db_xref="CDD:271146"
     Site            order(717,741,743,745,775..776,816)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:271146"
     Site            order(724,732..738,792..799,823)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:271146"
     Region          857..926
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 msslkkelvn satskstekt vllavenskk fngkinykes nssseflige iknvaessfy
       61 ikvmdksleg hiifkktkea ykyysdaqgn ayvskvdint lvcinyenvp qtssktskva
      121 aaaeiapall nlqslpgaag cvlldfdgyn mpagnlwnng nainaapsgm sdaavqqhwe
      181 vvaedyrpfn vnittseavf nsyprnrrmr vvvtptntaa pgaggvayig sfnwdndvpc
      241 wvfitsgksg gdasaheigh tfdlghdgrt npsegyfigi dgtswapimg agyyrpvvqw
      301 skgeynyann tqddvatias akfgvgyrgd dygnniasaa nldynasgai nqkngviase
      361 adydfftftt gggnvsinan tvsrdgnlhl lmrlynaaga eigtywnsdp fvlnasmnvn
      421 lpagkyyvgv dgsgagnagy ggysaygsig sysitgtipp ggnispstdv itvykdcnyt
      481 gfsggltigd ynmarlnalg vlnddisslr itqgfqaily qddnftggst vinsdnscln
      541 ttwndkvtsi riiangvttl gnatyflqnr nsglnmdvwt aslanganva qgnanggnhq
      601 kytfthlgdg lykiianhsg qsldvnnfnk anganveqyp yngttnqqfi lvstgdgfyk
      661 iiarhsgkvv evagastang anvqqwddng qtcgqwklip tttaqtssli qaedysamng
      721 iqteattdtg gglnvaytdt gdwiaynnin fptsgsytie yrvasavtga kissdlnggt
      781 iilgevgipn tggwqnwqtv sqtvtvsagt ynfgiyiqns gvninwikit kigaaastpq
      841 vstivlneei devafnvypn pvsetlfftt nvsganvsiv dsqtgslvtk qkindnnvnv
      901 sglksgvyii ifdkdgqqti krfikk
//
LOCUS       WP_236025373             554 aa            linear   BCT 02-MAR-2025
DEFINITION  sialate O-acetylesterase [Flavobacterium geliluteum].
ACCESSION   WP_236025373
VERSION     WP_236025373.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium geliluteum
  ORGANISM  Flavobacterium geliluteum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 554)
  AUTHORS   Surolia,I., Pirnie,S.P., Chellappa,V., Taylor,K.N., Cariappa,A.,
            Moya,J., Liu,H., Bell,D.W., Driscoll,D.R., Diederichs,S.,
            Haider,K., Netravali,I., Le,S., Elia,R., Dow,E., Lee,A.,
            Freudenberg,J., De Jager,P.L., Chretien,Y., Varki,A.,
            MacDonald,M.E., Gillis,T., Behrens,T.W., Bloch,D., Collier,D.,
            Korzenik,J., Podolsky,D.K., Hafler,D., Murali,M., Sands,B.,
            Stone,J.H., Gregersen,P.K. and Pillai,S.
  TITLE     Functionally defective germline variants of sialic acid
            acetylesterase in autoimmunity
  JOURNAL   Nature 466 (7303), 243-247 (2010)
   PUBMED   20555325
REFERENCE   2  (residues 1 to 554)
  AUTHORS   Bitto,E., Bingman,C.A., McCoy,J.G., Allard,S.T., Wesenberg,G.E. and
            Phillips,G.N. Jr.
  TITLE     The structure at 1.6 Angstroms resolution of the protein product of
            the At4g34215 gene from Arabidopsis thaliana
  JOURNAL   Acta Crystallogr D Biol Crystallogr 61 (Pt 12), 1655-1661 (2005)
   PUBMED   16301800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015585.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03629.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Flavobacterium geliluteum"
                     /db_xref="taxon:2816120"
     Protein         1..554
                     /product="sialate O-acetylesterase"
                     /calculated_mol_wt=61600
     Region          28..275
                     /region_name="SASA"
                     /note="Carbohydrate esterase, sialic acid-specific
                     acetylesterase; pfam03629"
                     /db_xref="CDD:427409"
     Region          <300..543
                     /region_name="Fes"
                     /note="Enterochelin esterase or related enzyme [Inorganic
                     ion transport and metabolism]; COG2382"
                     /db_xref="CDD:441948"
ORIGIN      
        1 mmksiikffa favlfsigqk gysqdadfqv ylsfgqsnme gsakiepqdk vgvddrfqvl
       61 aavdcpeigr kmgnwytaip plcrcttglt ltdyfgrtmv dnlpknvkig iinvavggck
      121 ielfdkdkse syiatapdwm kgmikqydgn pyarlvemar iaqkkgvikg illhqgesnt
      181 ndtlwpkkvk ivydnlmkdl nldpkkvpll sgetvgedqn gkcavmnkii tklpqtipns
      241 yvisssgcag addnlhftaa gyrelgkrya qrmlsllgyk lddgktilri hapigydqln
      301 sniasgkves isynsktvgs lrkatvytpp gfnkkkkypv lyllhgiggd ekewlnggnp
      361 qiildnlyae akiepmivvm pngramkdds asgnimapek ieafaafekd llndlipfie
      421 kkyptykdse hraiaglsmg ggqslnfglg nldqfawvga fsaapntkmp eellpnpeea
      481 kkklqllwis cgdndrlidn skrthdyldk nevphiyyie pgvhdfkvwk nglymfsqfl
      541 fkpvdqssfa sykf
//
LOCUS       WP_236025407             738 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4838 domain-containing protein [Flavobacterium geliluteum].
ACCESSION   WP_236025407
VERSION     WP_236025407.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium geliluteum
  ORGANISM  Flavobacterium geliluteum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027452.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16126.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Flavobacterium geliluteum"
                     /db_xref="taxon:2816120"
     Protein         1..738
                     /product="DUF4838 domain-containing protein"
                     /calculated_mol_wt=85815
     Region          22..>159
                     /region_name="Chb"
                     /note="N-acetyl-beta-hexosaminidase [Carbohydrate
                     transport and metabolism]; COG3525"
                     /db_xref="CDD:442747"
     Region          185..441
                     /region_name="DUF4838"
                     /note="Domain of unknown function (DUF4838); pfam16126"
                     /db_xref="CDD:406516"
ORIGIN      
        1 mkaktlnscy lllilmfynt ktmaqsqiii tnqnaiiaaa kntqsaalil knnldkafka
       61 sfkinpttva gnseivleit nsdneiqnqn efiiksdtks iylkakneky lryaiytlle
      121 mwgfrkytaa etfiprleqi lfdknytkki kpdfeyrsll ypdaydpdfr dwhkldwqid
      181 dfslwghsfy tlvpakdffk dnpklfalye gqrnteslcm tndtvvelit ekmkkiiaqn
      241 pnaaffsvsq nddvvycecs eckalnakyg gpqgslysfl nkiatqfptt kittlaylht
      301 qkpplnlkie pniytlfcpi eldrgkplns qnsasfiktl enwsatsphl ylwdysvqfa
      361 nyfspfpnih tfsenyktfk knnvkglfvq gyadilgdfs elrqyllakl lwdtsidiea
      421 ttadflrgfy gkaapfinqy lnllaenqtk sntyldiysg pvqsrntflt peaiteydhl
      481 lekasvatee dpilnarvlk lrlaleyvff eqskfygknq hgmfvvnekg ekevkqgltn
      541 rvlnftkacn dlkiyelseg glspddyyee wleiakntts hlgetlkvnf itppsndfeg
      601 kgseslvdgn rgyrdfninw igwydtnpef eiltqnldft rlkinfledq rhwiflpkai
      661 kiygyknqnw elikqydfes ftenyetkpk swqltdqsfk nfikikvlie nqtqlpdwrk
      721 rknkkpmvmi deielykk
//
LOCUS       WP_236025406             572 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase domain-containing protein [Flavobacterium
            geliluteum].
ACCESSION   WP_236025406
VERSION     WP_236025406.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium geliluteum
  ORGANISM  Flavobacterium geliluteum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 572)
  AUTHORS   Xiong,Y. and Eickbush,T.H.
  TITLE     Origin and evolution of retroelements based upon their reverse
            transcriptase sequences
  JOURNAL   EMBO J 9 (10), 3353-3362 (1990)
   PUBMED   1698615
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00078.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Flavobacterium geliluteum"
                     /db_xref="taxon:2816120"
     Protein         1..572
                     /product="reverse transcriptase domain-containing protein"
                     /calculated_mol_wt=67660
     Region          141..431
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            order(226..231,341..342,375,377..378,427..428)
                     /site_type="active"
                     /db_xref="CDD:238185"
     Site            order(226..231,341,377)
                     /site_type="other"
                     /note="NTP binding site [chemical binding]"
                     /db_xref="CDD:238185"
     Region          <335..570
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            342
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:238185"
ORIGIN      
        1 mtvetlrlvl rfnflnifdv finlvtkiti sipekssvai alqkvkaste pvhskpttik
       61 sdpfflnmei enwfklkkyp higlpitikd ynwakkyvmd kekikkhsfl plihkcisqr
      121 kfrpdktrtd ktktkkrfri kdkkdrniff ashidslifs yyntllvday eayiskkeyn
      181 nsvvayrkip lfegaennkc niefakepfe fikknndkkl svivadvtsf fdnldhkilk
      241 kqwtkilsek tlpsehynvf kaltkikyie geqlfnsyhr tmiverglpn sskksiykrk
      301 eiskshyfke kkavaycekd efiknnlnlv isknnkvgip qgspisatla nvymidfdki
      361 vykkvdsikg yyqrysddli iiceqeyede iikiirenis sknianleiq pkktsvyrfe
      421 nientfkgfe ideitkipnf nktleylgfs ydgqkvlikt sgfskfyrsm iksfkksasl
      481 skysknpdkr ifksklfkrf sykgskrkli yrpskddktk ylktkeynwg nylsyvykan
      541 ctmreinned sikkqtrkfw knfnhlmkkh st
//
LOCUS       WP_236025469             153 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Flavobacterium geliluteum].
ACCESSION   WP_236025469
VERSION     WP_236025469.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium geliluteum
  ORGANISM  Flavobacterium geliluteum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07883.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Flavobacterium geliluteum"
                     /db_xref="taxon:2816120"
     Protein         1..153
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=17481
     Region          63..123
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 mdtnekkfss kdfhetyarp tfikpsklih rnvenegvhn qfsaerkhpv ffidlpsknv
       61 smtiggllpd qttnrhrhty etvlyviegt gwteiedekv ewkagdavyi pswawhrhgn
      121 lsstesakyl acenapqlqn lgvalreeeg rdl
//
LOCUS       WP_236025571            2062 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase [Algoriphagus oliviformis].
ACCESSION   WP_236025571
VERSION     WP_236025571.1
KEYWORDS    RefSeq.
SOURCE      Algoriphagus oliviformis
  ORGANISM  Algoriphagus oliviformis
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Algoriphagus.
REFERENCE   1  (residues 1 to 2062)
  AUTHORS   de la Cruz,J., Kressler,D. and Linder,P.
  TITLE     Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and
            related families
  JOURNAL   Trends Biochem Sci 24 (5), 192-198 (1999)
   PUBMED   10322435
REFERENCE   2  (residues 1 to 2062)
  AUTHORS   Aubourg,S., Kreis,M. and Lecharny,A.
  TITLE     The DEAD box RNA helicase family in Arabidopsis thaliana
  JOURNAL   Nucleic Acids Res 27 (2), 628-636 (1999)
   PUBMED   9862990
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012492.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00270.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Algoriphagus oliviformis"
                     /db_xref="taxon:2811231"
     Protein         1..2062
                     /product="DEAD/DEAH box helicase"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=237346
     Region          34..235
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(61..67,194)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          941..1025
                     /region_name="HELICc"
                     /note="helicase superfamily c-terminal domain; smart00490"
                     /db_xref="CDD:197757"
     Site            1021
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350171"
     Region          1507..1595
                     /region_name="MZB"
                     /note="MrfA Zn-binding domain; pfam09369"
                     /db_xref="CDD:462776"
ORIGIN      
        1 mfkgpfvslr lpfvkanaee aanipltikp twppydhqvk awhrlstrdk npqstlittg
       61 tgsgktesfl ypildycyeq rrrfgikvii lypmnalatd qaermadiih qddrlkgilt
      121 aglfigegkd nknfptsmgp kniienreti lgsppdillt nfkmldyalm ksnyhdlwag
      181 nlqdptllqf lvldelhtyd gaqgtdvanl irrlklkini pknhlcpvgt satigsgvda
      241 prllseyask ifgeelteda vitenrqkid dffedrdllr dsspsikslr eslpvanegf
      301 dsyvrkqldi wglrldklst qlrelrivrd lvevlnerqg iytveqvsnl lssknpafrd
      361 nypqwnetyr fnpkeaaihs lisiitiake mdlaspaasp flfaqthlwi relsgvlrai
      421 enkprftwkd hinpednala lppwfcrecg asgwlgvkhd nkerferdin dvyskffdnh
      481 khiyfvnets rfsqtdaamv gyeptdqfkt ylspsnlefn teyqegrvgi tafkkvnakg
      541 yaehycpecn tkntvaiigt rvatlssiav gqtlstdldg qtekqrkvla ftnavqdaah
      601 qasfvearny rftfrsslqk vinqadqals laeladnfid ywkanadesg ekpldayfyr
      661 ffptdylgka spsdyhengk ytqafqkefd hrvrweifae fgynsligrt lektgssgvf
      721 fdkskiaalw prleswistn dasqtiqrdd fnrfvtlllh rirsrgaish vfldkfrekd
      781 lslwdlnwmk dkrhflnkrf hpsqrlpkli tyeketrgll dstfslhanw fhsyfkksfq
      841 lagnhpdfvn elfsevilal eaaeildrkv agqqvnfain paslrisknv krlscdkceh
      901 eiqtadnylg ieggkclmyk cpgsysflse agifqesnyy qlvynrnrsp riyaaehtgl
      961 lerknrelle kdfkerprfn sknvmvatst lemgidigtl ntainnsipp lpsnflqrvg
     1021 ragrksgsal lvnfaqsksh dlfyyqapld mmagevhtpg cyleakeilk rhffaycids
     1081 wtskdskann ippnikflkl sleslesadf fmnrilnfvk snetilfdrf keqyefhvsq
     1141 sifdelrqsl dsdhfyfshk nifdqlrkei adiqkkreev lkriktlnlg tedpdrkele
     1201 teaknlsgiv ysikkrntle yltnigalpn yafpetgvtl lakvlgnqae astkaplskd
     1261 feivrgasqa ikelapdnff ysqtykfkvt glntfdwtds nnshtkrfcs ncdhleigtf
     1321 qpsqatcpkc gdsswgaasn nhhfvkltnv ksfnnesdvy lkddqedres nvyeisrhfe
     1381 fkanlsqgaw amkeipfgie fvknttitdv nlgkqgqvda rritinssev pahgfvtcmy
     1441 cgksssnire gdykfhygyc khkdrdyrgg sddvfaeafl freiqtealk illpvqdfnt
     1501 eaeikmfqag melglkkyfn gnpqhisvsd yreynhhtgk idrylilfdt vpggtgylek
     1561 lfdrlnfsel lklayneikd cscqhhgkdg cyrciysyqn qyyqqdlsre raekrfaeiv
     1621 nkseswesvp hglgkiaasg qieeseleer fvrslkilae qtpewelqei kedgrvnyil
     1681 kfknsssdlt yhirpqvvlg pshgiqfitr tdfllvctaa sfngkefedl esipriavyl
     1741 dgyqfhasee nnrflndlek rqailasnqy vswtltwddv ekfdsgfipd rekqlsedfl
     1801 felskadgfk gskrivtqkf gtqdpikvye tknnferlla llrfpipntn vfnfswglff
     1861 isfqqkwlnp syrpekiqea ffekeyldqy aldqktqnal ipfggvpknd lfemgvlvhl
     1921 kkwqpyyrfr irsaekidkg ewncfwtlfn aiqffeevkk pnegieaien eyslgellgn
     1981 fpddayhvll tklfekgvik nqkdeiklyt aiddeenila eagliiehlk ivfepidsqs
     2041 liyfenhgyq vssleqlknl el
//
LOCUS       WP_236025595             464 aa            linear   BCT 02-MAR-2025
DEFINITION  putative oxidoreductase C-terminal domain-containing protein
            [Algoriphagus oliviformis].
ACCESSION   WP_236025595
VERSION     WP_236025595.1
KEYWORDS    RefSeq.
SOURCE      Algoriphagus oliviformis
  ORGANISM  Algoriphagus oliviformis
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Algoriphagus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027805.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16490.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Algoriphagus oliviformis"
                     /db_xref="taxon:2811231"
     Protein         1..464
                     /product="putative oxidoreductase C-terminal
                     domain-containing protein"
                     /calculated_mol_wt=52246
     Region          70..175
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Region          189..462
                     /region_name="Oxidoreduct_C"
                     /note="Putative oxidoreductase C terminal domain;
                     pfam16490"
                     /db_xref="CDD:435372"
ORIGIN      
        1 mkfkfemmfs nkvkigaala lfsascsspe mksdlsesdt kvkimtldpg hfhaglihks
       61 myptvdstvy vfapegaeln dhlkriagyn ersenptawn levytgadyl qkmisekpgn
      121 vmmvagkndr kvdyilaaie ngihvyadkp lvinqegfkk llrafqlage kdlllydimt
      181 erfeittllq relsmipevf geletgtped paitkesvhh ffkyvsgapl irpdwffdva
      241 vegegivdvt thlvdliqwe afpgvtldtt dvqmlaakrw atsmtleefq kvtgkseipd
      301 flqkdmkdgk levfangemt ytlkgkhaka sviwnyqape gsadthysmm rgtkakliir
      361 qgkeenyrpa fyvelagadl aslekavket lqgkypgigl ekmpsgeyqv tipdsyhngh
      421 eahfaqvter fleyyqagkm pawevpnmit kyytnikare falk
//
LOCUS       WP_236025413             245 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Flavobacterium geliluteum].
ACCESSION   WP_236025413
VERSION     WP_236025413.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium geliluteum
  ORGANISM  Flavobacterium geliluteum
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Flavobacterium geliluteum"
                     /db_xref="taxon:2816120"
     Protein         1..245
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=26756
     Region          5..241
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(13,15..16,18,37..38,79..81,131..133,156,160,
                     186..189)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187635"
     Site            order(106,133,156,160)
                     /site_type="active"
                     /db_xref="CDD:187635"
ORIGIN      
        1 mnslkdkiii vtggsgllgk eivknlegkg aiainadisv etdftkrtls vditseesiv
       61 kalksvadfy gkidglvnna yprtkdwgtk fediiyeswq knvdmqmnti flfiqkiipe
      121 llktkgsivn mtsiygvvgn dltiyentsi ntaapysaik ggvinftryl asyygrqgvr
      181 vncvspggif dnqhetfvan yekkvpmgrm gnpddiapav sfllsdeaky itgqnlivdg
      241 gwtai
//
LOCUS       WP_236025722             365 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4249 family protein [Algoriphagus oliviformis].
ACCESSION   WP_236025722
VERSION     WP_236025722.1
KEYWORDS    RefSeq.
SOURCE      Algoriphagus oliviformis
  ORGANISM  Algoriphagus oliviformis
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Algoriphagus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025420.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14054.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Algoriphagus oliviformis"
                     /db_xref="taxon:2811231"
     Protein         1..365
                     /product="DUF4249 family protein"
                     /calculated_mol_wt=41656
     Region          20..308
                     /region_name="DUF4249"
                     /note="Domain of unknown function (DUF4249); pfam14054"
                     /db_xref="CDD:433679"
ORIGIN      
        1 mnrlgifglv cvvlafnscv ekiafeldkp drerlivsgl ltdlretqfv ylsvttsnar
       61 epildggnyt lddmprpfsg awvklidvts gkswdyyltk dgqyeltgfv hespearysl
      121 eitvsgavyr sepqaipevi gsdelsfsfe rarlddnpda alvvirtett lpeqvgdyyl
      181 rwmvdeayfw dltffpnpfn tppppcvvfg fpeperitll ngellnapgg kttqivaqkl
      241 vdqsflsrhy fnvrqlsisk dayeywrrvr eivnntgsvf dtplapikgn lysvyddeev
      301 vlgyfevakg krerifttfa dvpfflekic eyqpnksrde ydptclscga fpnsityfpd
      361 wwfdd
//
LOCUS       WP_236025728              97 aa            linear   BCT 02-MAR-2025
DEFINITION  phage capsid protein, partial [Algoriphagus oliviformis].
ACCESSION   WP_236025728
VERSION     WP_236025728.1
KEYWORDS    RefSeq.
SOURCE      Algoriphagus oliviformis
  ORGANISM  Algoriphagus oliviformis
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Algoriphagus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040375.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19821.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Algoriphagus oliviformis"
                     /db_xref="taxon:2811231"
     Protein         1..>97
                     /product="phage capsid protein"
     Region          <1..97
                     /region_name="Phage_capsid_2"
                     /note="Phage capsid protein; pfam19821"
                     /db_xref="CDD:437653"
ORIGIN      
        1 mfrrnecdeq ngeelfityn admltqilsd ttltsadyma vkmlqegavs gnwlgfkwla
       61 yekldsasag dpavttktaa awcksavhfg tgaeynt
//
LOCUS       WP_236025725              54 aa            linear   BCT 02-MAR-2025
DEFINITION  CII family transcriptional regulator, partial [Escherichia coli].
ACCESSION   WP_236025725
VERSION     WP_236025725.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 54)
  AUTHORS   Kobiler,O., Koby,S., Teff,D., Court,D. and Oppenheim,A.B.
  TITLE     The phage lambda CII transcriptional activator carries a C-terminal
            domain signaling for rapid proteolysis
  JOURNAL   Proc Natl Acad Sci U S A 99 (23), 14964-14969 (2002)
   PUBMED   12397182
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017113.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05269.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..54
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..54
                     /product="CII family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
     Region          <1..39
                     /region_name="Phage_CII"
                     /note="Bacteriophage CII protein; pfam05269"
                     /db_xref="CDD:398780"
ORIGIN      
        1 krdwipkfsm llavlewgvv dddmarlarq vaailtnkkr paaterseqi qmef
//
LOCUS       WP_236025745             438 aa            linear   BCT 02-MAR-2025
DEFINITION  cbb3-type cytochrome c oxidase subunit II [Geomonas azotofigens].
ACCESSION   WP_236025745
VERSION     WP_236025745.1
KEYWORDS    RefSeq.
SOURCE      Geomonas azotofigens
  ORGANISM  Geomonas azotofigens
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
REFERENCE   1  (residues 1 to 438)
  AUTHORS   Marchal,K., Sun,J., Keijers,V., Haaker,H. and Vanderleyden,J.
  TITLE     A cytochrome cbb3 (cytochrome c) terminal oxidase in Azospirillum
            brasilense Sp7 supports microaerobic growth
  JOURNAL   J Bacteriol 180 (21), 5689-5696 (1998)
   PUBMED   9791120
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014486.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02433.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Geomonas azotofigens"
                     /db_xref="taxon:2843196"
     Protein         1..438
                     /product="cbb3-type cytochrome c oxidase subunit II"
                     /calculated_mol_wt=47536
     Region          6..291
                     /region_name="PRK14486"
                     /note="putative bifunctional cbb3-type cytochrome c
                     oxidase subunit II/cytochrome c; Provisional"
                     /db_xref="CDD:184704"
ORIGIN      
        1 mkmtpafliv gallvfwast fiivglpslt mkdtpsdiwr plspleregh rlyvkngcsy
       61 chslfirvnd wdigaeriar agdyagiepa ilgsertgpd lsqeggehsd dwniahftnp
      121 ryttpislmp awdfltnhei aalaayvqal ggkdadvrqk rqrewkrkaq aayaggvdrn
      181 iewlhaqvpe awrrmpnpyp ateaalqrgk riyqqlcinc hspigdgngp ahpflgpppl
      241 nftilrrhlv enryiggify yqimngitgt ampyfkkhle sekiwdlany lavsfvgytd
      301 anteprgida syegewqtpp pppavpgppr ppprgggggg ggtslapplp asplrgeeqm
      361 deaahmtmma pppltpsrkg sgtgtgerhe qrvgytgfpv hldvlpaldv rdadrllpvg
      421 gavgtvrgpg agplpgag
//
LOCUS       WP_236025855             263 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF268 domain-containing protein [Geomonas azotofigens].
ACCESSION   WP_236025855
VERSION     WP_236025855.1
KEYWORDS    RefSeq.
SOURCE      Geomonas azotofigens
  ORGANISM  Geomonas azotofigens
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015241.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03269.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Geomonas azotofigens"
                     /db_xref="taxon:2843196"
     Protein         1..263
                     /product="DUF268 domain-containing protein"
                     /calculated_mol_wt=28918
     Region          <145..>221
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
ORIGIN      
        1 mlmgegaagv lgpfralagk llslagelra yrafrqefkr fselcgaadr fqlewrdryp
       61 clhdktantg fdrhyvyhta wgarkvaqir pqshvdvsss lhfctlvsaf vpvrfydyrp
      121 vdlrlsdlsc daadllrlpf ddesiaslsc mhvvehvglg rygdpldpeg dlkavaelkr
      181 vlapcgsllf vvpvggrpcc mfnahriysy sqvlelfhgl dlvefslvpd dpaagglvvd
      241 agkaladaqt ygcgcfwfkk pap
//
LOCUS       WP_236025868             969 aa            linear   BCT 02-MAR-2025
DEFINITION  zincin-like metallopeptidase domain-containing protein [Geomonas
            azotofigens].
ACCESSION   WP_236025868
VERSION     WP_236025868.1
KEYWORDS    RefSeq.
SOURCE      Geomonas azotofigens
  ORGANISM  Geomonas azotofigens
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
REFERENCE   1  (residues 1 to 969)
  AUTHORS   Iyer,L.M., Burroughs,A.M., Anand,S., de Souza,R.F. and Aravind,L.
  TITLE     Polyvalent Proteins, a Pervasive Theme in the Intergenomic
            Biological Conflicts of Bacteriophages and Conjugative Elements
  JOURNAL   J Bacteriol 199 (15), e00245-17 (2017)
   PUBMED   28559295
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037521.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18818.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..969
                     /organism="Geomonas azotofigens"
                     /db_xref="taxon:2843196"
     Protein         1..969
                     /product="zincin-like metallopeptidase domain-containing
                     protein"
                     /calculated_mol_wt=107484
     Region          2..291
                     /region_name="ArdC"
                     /note="Antirestriction protein ArdC [Replication,
                     recombination and repair]; COG4227"
                     /db_xref="CDD:443371"
     Region          435..476
                     /region_name="DUF5710"
                     /note="Domain of unknown function (DUF5710); pfam18974"
                     /db_xref="CDD:436878"
     Region          494..535
                     /region_name="DUF5710"
                     /note="Domain of unknown function (DUF5710); pfam18974"
                     /db_xref="CDD:436878"
     Region          546..>834
                     /region_name="COG4643"
                     /note="Uncharacterized domain associated with
                     phage/plasmid primase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:443681"
ORIGIN      
        1 mesrklfhek vaekliekqk egtapwqkpw qpgaaesfip inpttgqryr ginaillmsq
       61 drsdqrwmty kqaaainaqv rkgekgtpie ywkftdertk ldadgkpvld dsgepvkqsv
      121 rlerprvffa tvfnaeqidg lppaaprkvr ewnpvkrvqd illasgaaik hgerdrafyr
      181 patdsihlpd aaqfptadsy yatalhelgh wtghqsrlnr dlahpfgseg yareelraei
      241 asmilgdelg ighdpgqhaa yvaswiksle edpleifraa adaekiqeyv lhleqkqiqe
      301 eqaeeqdevl telqklhlaa ydgfspletw nnlqtvaesn glsasigrgg aghydppyli
      361 tytdraghkt sitselfqdg kaltcvngeh vpgtsctsdh ewqsaalnna virmnnrkpa
      421 qeakimsdii ptgvriyidv pyrekeeaka lgakwdrqkq lwyipadked safakwkqkd
      481 asaarearks ggervylavp ygerkaakaa gavwdqaars wyagpkadma mlerwaadkv
      541 pgqqmpamtp qeefaealas mgcivegehp vmdgekhria vtgdvkgeha gfyvghldgh
      601 pagyiknnrt gvdmkwkskg yvlspeekaq lqaqaatklq areteqarrh eqtaqrvslq
      661 madlvpvtlp taylrakgle phpgvmtdke gretfipaid vdgkqwtmqy iqedgtkrfa
      721 kdsrkagcfh vvgglealaq apalvigegy atagtlaqil gyatvaafds gnllpvatal
      781 hqkfpdkpvi iagdddrhle mthginpgrs kaeeaaravg gkillpifap geaaypeels
      841 pvtplayrnh inaakvleda qkepgrltep qatelrrvll speqlaaldr mkqhtdfndl
      901 vtrsqlgmeg lrrqansiim aeiekynets gitakerpth veelqekpke kkqlkqprqa
      961 kthrrvkpa
//
LOCUS       WP_236025919             976 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-glutamate dehydrogenase domain-containing protein [Geomonas
            azotofigens].
ACCESSION   WP_236025919
VERSION     WP_236025919.1
KEYWORDS    RefSeq.
SOURCE      Geomonas azotofigens
  ORGANISM  Geomonas azotofigens
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
REFERENCE   1  (residues 1 to 976)
  AUTHORS   Lazaro,M., Melero,R., Huet,C., Lopez-Alonso,J.P., Delgado,S.,
            Dodu,A., Bruch,E.M., Abriata,L.A., Alzari,P.M., Valle,M. and
            Lisa,M.N.
  TITLE     3D architecture and structural flexibility revealed in the
            subfamily of large glutamate dehydrogenases by a mycobacterial
            enzyme
  JOURNAL   Commun Biol 4 (1), 684 (2021)
   PUBMED   34083757
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 976)
  AUTHORS   Minambres,B., Olivera,E.R., Jensen,R.A. and Luengo,J.M.
  TITLE     A new class of glutamate dehydrogenases (GDH). Biochemical and
            genetic characterization of the first member, the AMP-requiring
            NAD-specific GDH of Streptomyces clavuligerus
  JOURNAL   J Biol Chem 275 (50), 39529-39542 (2000)
   PUBMED   10924516
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016944.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05088.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Geomonas azotofigens"
                     /db_xref="taxon:2843196"
     Protein         1..976
                     /product="NAD-glutamate dehydrogenase domain-containing
                     protein"
                     /GO_function="GO:0004352 - glutamate dehydrogenase (NAD+)
                     activity [Evidence IEA]"
                     /calculated_mol_wt=110621
     Region          151..954
                     /region_name="Bac_GDH"
                     /note="Bacterial NAD-glutamate dehydrogenase; cl29306"
                     /db_xref="CDD:452960"
ORIGIN      
        1 mkqnrsladr nlawihsrih pyffitmqee idaiailagg lhnlsrnrrm iladrdrmli
       61 qavlnrpgsl yetlrtlker eisyahfavs ngplpdsehh lelqrfefdr ktpqevaast
      121 dkapvavkrr iaaalrrdyp gfdhkrldyl lnilwinnqd yvrispatrv artlalfqqt
      181 rnnggvylda epantgetrl mfavgnppqr dflqqimevf nrlevsvkra ycltisnelh
      241 pyflgnfyvt trdgaevtrg selflrlqse lyntqilsta spsyaelvvk gvmsgedall
      301 vnamigfcht nlahthpdsf dlegimrafh nhpdiaqqlv klfrarfdpa vadretnyaa
      361 vlaettrvvd syntghafld efrrtifrca llfirytlkt nfyvleksal afrldpgyms
      421 elepkfsadl pperpfrity fharyglgyh igfsdiargg wrtlitngrd dyvtcanslf
      481 renyvlahtq hlknkdiyeg gskmvvvlda agiqdrdlvt qrlyklqysl inafldifvt
      541 ekgkakdtrv vdyygedepi elgpdenmhd amvelvaaqs vrrgyllgig imsskkvgin
      601 hkeygvtsag virfaeitma elgidmhrdp fsvkftggpn gdvagnsmrl llercpkvai
      661 rlvidgtgal ydpagadrda lgkivlqadi dafdasalhp ggfilyrnrt rregmkelyc
      721 kvardqeglk elwvsndefy reynslvftv aadlfipagg rpetvrehdc drfftgdgtp
      781 ltraivegan sfitpkarve lqrrgivlmr dasankcgvi sssyeiianl llsekefleq
      841 kepyvrdvir ilnkraedea rlifrrhrea ggtqlfteis daisteinah yaqlfnffqk
      901 npqlcdrply rkailahlpg mlagkpayrm rtnglppkyk yailsseias smvyrgekvn
      961 dgyrelleah lkrlsa
//
LOCUS       WP_236025632             698 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-L-arabinofuranosidase domain-containing protein [Algoriphagus
            oliviformis].
ACCESSION   WP_236025632
VERSION     WP_236025632.1
KEYWORDS    RefSeq.
SOURCE      Algoriphagus oliviformis
  ORGANISM  Algoriphagus oliviformis
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Algoriphagus.
REFERENCE   1  (residues 1 to 698)
  AUTHORS   Ito,T., Saikawa,K., Kim,S., Fujita,K., Ishiwata,A., Kaeothip,S.,
            Arakawa,T., Wakagi,T., Beckham,G.T., Ito,Y. and Fushinobu,S.
  TITLE     Crystal structure of glycoside hydrolase family 127
            beta-l-arabinofuranosidase from Bifidobacterium longum
  JOURNAL   Biochem Biophys Res Commun 447 (1), 32-37 (2014)
   PUBMED   24680821
REFERENCE   2  (residues 1 to 698)
  AUTHORS   Fujita,K., Takashi,Y., Obuchi,E., Kitahara,K. and Suganuma,T.
  TITLE     Characterization of a novel beta-L-arabinofuranosidase in
            Bifidobacterium longum: functional elucidation of a DUF1680 protein
            family member
  JOURNAL   J Biol Chem 289 (8), 5240-5249 (2014)
   PUBMED   24385433
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019556.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07944.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Algoriphagus oliviformis"
                     /db_xref="taxon:2811231"
     Protein         1..698
                     /product="beta-L-arabinofuranosidase domain-containing
                     protein"
                     /calculated_mol_wt=78934
     Region          93..572
                     /region_name="LanC_like"
                     /note="Cyclases involved in the biosynthesis of
                     lantibiotics, and similar proteins; cl04955"
                     /db_xref="CDD:471159"
ORIGIN      
        1 mflasalifa cspqpkedtk ntahylsnra plvqtpylel pigsikpkgw ledqlkrmat
       61 gltghldevy pevvgarngw lggdgdgwer gpywidgllp layilddeal kakaqtwvdw
      121 tlnnqaesgy lgpipfetdp tpepgiqkgp redwwpkmvm lkvlqqyyqa tsdprvveal
      181 tkyfhyqlre lpqkpldhls fwanrragdn llvvywlyni tgdekllelg eliqkqtfpw
      241 qtvytnsend lqhdnthfyn qiktypfdsa eiatitlskl pglhtvnvaq glkqpvvyyq
      301 ksgdgdaiaa vkmalkdlqt yhgqaqgmyg gdeplhgnnp vqgiefcsva eemysletmi
      361 kitgdmdfad llekitynal ptqasddfts rqyfqaanqv elsdrletsy etknhggtdf
      421 vfgtlsgypc cttnmhqswp kfvqnlfyat sdggvaaiqy apsevellvg qgaklrltek
      481 tgfpfreevn felelsessr fpfhlripaw ardfeilvng qkqdvdtkdg iaildrewks
      541 gdlvklrlpm elnsstwfkg lvsiergplv yslkvthdek akdrgdrfra ftevyptsdw
      601 nfalsqsdle nledvvgike tewdgsypwn lenapvelhl savqlpewtl vngapqlpek
      661 afskiskeew egrkktvtli pygcttlrit efptlaie
//
LOCUS       WP_236026180             409 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Alicyclobacillus suci].
ACCESSION   WP_236026180
VERSION     WP_236026180.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus suci
  ORGANISM  Alicyclobacillus suci
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Alicyclobacillus suci"
                     /db_xref="taxon:2816080"
     Protein         1..409
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44362
     Region          23..400
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(26..27,30..31,34,71,121..122,124..126,129,148,
                     151..152,155,230,233..234,237..239,242,273,277,326..327,
                     331,335,351,354..355,358..359,362)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mseerrsgtt swksilwima avqfcmsiaf sssnpfmaly veqlgvhnpr yvdiltgiiq
       61 gmtplmaaim spfwgslsdr sgrkmmvlrs tiaigiftgi lglaqstwql miirgfqgaf
      121 sgfsaasial vasvipqdrl gfslgwiqts smvgtlvgpl lggvaadyfk nyhmvffltt
      181 ifafiaftit llfvrepkgk lvptrkkpsl vgqfraikel kmvrpmfivl fltqftvmsv
      241 qpvlsvfmkq lagnvgylnt iagfafavtg ladliaspfl gkrsdkigyr rvlticmtga
      301 glfylpqals pniwvfiasr fglgmfiggi lptanaligr mapsdkrgqi ygftssatfl
      361 gsfagpllgg vgsaalgirt mlgvagalyi cnmlwvrwkv repgrfeqs
//
LOCUS       WP_236026253             120 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma factor-like helix-turn-helix DNA-binding protein
            [Alicyclobacillus suci].
ACCESSION   WP_236026253
VERSION     WP_236026253.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus suci
  ORGANISM  Alicyclobacillus suci
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 120)
  AUTHORS   Campbell,E.A., Muzzin,O., Chlenov,M., Sun,J.L., Olson,C.A.,
            Weinman,O., Trester-Zedlitz,M.L. and Darst,S.A.
  TITLE     Structure of the bacterial RNA polymerase promoter specificity
            sigma subunit
  JOURNAL   Mol Cell 9 (3), 527-539 (2002)
   PUBMED   11931761
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04545.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Alicyclobacillus suci"
                     /db_xref="taxon:2816080"
     Protein         1..120
                     /product="sigma factor-like helix-turn-helix DNA-binding
                     protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=13832
     Region          <42..108
                     /region_name="sigma70-ECF"
                     /note="RNA polymerase sigma factor, sigma-70 family;
                     TIGR02937"
                     /db_xref="CDD:274357"
ORIGIN      
        1 mpsmtarydl aegshgtffi ssstekyaid rieskraldl heqiaqyqmi vdsidealkt
       61 ltdeersfae mryfkqwsir rtaealgyse knifvirsrv meklticlsn viwspvadrk
//
LOCUS       WP_236026252             127 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome c3 family protein [Geomonas azotofigens].
ACCESSION   WP_236026252
VERSION     WP_236026252.1
KEYWORDS    RefSeq.
SOURCE      Geomonas azotofigens
  ORGANISM  Geomonas azotofigens
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
REFERENCE   1  (residues 1 to 127)
  AUTHORS   Matias,P.M., Coelho,A.V., Valente,F.M., Placido,D., LeGall,J.,
            Xavier,A.V., Pereira,I.A. and Carrondo,M.A.
  TITLE     Sulfate respiration in Desulfovibrio vulgaris Hildenborough.
            Structure of the 16-heme cytochrome c HmcA AT 2.5-A resolution and
            a view of its role in transmembrane electron transfer
  JOURNAL   J Biol Chem 277 (49), 47907-47916 (2002)
   PUBMED   12356749
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09699.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Geomonas azotofigens"
                     /db_xref="taxon:2843196"
     Protein         1..127
                     /product="cytochrome c3 family protein"
                     /calculated_mol_wt=13955
ORIGIN      
        1 mtaialggml ffemgeanvy hqtsanhilt maecmachse dstrpvsicl ddhclysndh
       61 pvlrrypppa kadkfapvsd llaagcvled gkitclschn ltkpaphlvr dgdelcyich
      121 rylrsty
//
LOCUS       WP_236026486             260 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome c biogenesis protein CcsA [Geomonas azotofigens].
ACCESSION   WP_236026486
VERSION     WP_236026486.1
KEYWORDS    RefSeq.
SOURCE      Geomonas azotofigens
  ORGANISM  Geomonas azotofigens
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
REFERENCE   1  (residues 1 to 260)
  AUTHORS   Sawyer,E.B. and Barker,P.D.
  TITLE     Continued surprises in the cytochrome c biogenesis story
  JOURNAL   Protein Cell 3 (6), 405-409 (2012)
   PUBMED   22723177
REFERENCE   2  (residues 1 to 260)
  AUTHORS   Stevens,J.M., Mavridou,D.A., Hamer,R., Kritsiligkou,P.,
            Goddard,A.D. and Ferguson,S.J.
  TITLE     Cytochrome c biogenesis System I
  JOURNAL   FEBS J 278 (22), 4170-4178 (2011)
   PUBMED   21958041
REFERENCE   3  (residues 1 to 260)
  AUTHORS   Sanders,C., Turkarslan,S., Lee,D.W. and Daldal,F.
  TITLE     Cytochrome c biogenesis: the Ccm system
  JOURNAL   Trends Microbiol 18 (6), 266-274 (2010)
   PUBMED   20382024
REFERENCE   4  (residues 1 to 260)
  AUTHORS   Page,M.D., Pearce,D.A., Norris,H.A.C. and Ferguson,S.J.
  TITLE     The Paracoccus denitrificans ccmA, B and C genes: cloning and
            sequencing, and analysis of the potential of their products to form
            a haem or apo- c-type cytochrome transporter
  JOURNAL   Microbiology (Reading) 143 (Pt 2), 563-576 (1997)
   PUBMED   9043133
REFERENCE   5  (residues 1 to 260)
  AUTHORS   Delgado,M.J., Yeoman,K.H., Wu,G., Vargas,C., Davies,A.E.,
            Poole,R.K., Johnston,A.W. and Downie,J.A.
  TITLE     Characterization of the cycHJKL genes involved in cytochrome c
            biogenesis and symbiotic nitrogen fixation in Rhizobium
            leguminosarum
  JOURNAL   J Bacteriol 177 (17), 4927-4934 (1995)
   PUBMED   7665469
REFERENCE   6  (residues 1 to 260)
  AUTHORS   Thony-Meyer,L., Fischer,F., Kunzler,P., Ritz,D. and Hennecke,H.
  TITLE     Escherichia coli genes required for cytochrome c maturation
  JOURNAL   J Bacteriol 177 (15), 4321-4326 (1995)
   PUBMED   7635817
REFERENCE   7  (residues 1 to 260)
  AUTHORS   Bonnard,G. and Grienenberger,J.M.
  TITLE     A gene proposed to encode a transmembrane domain of an ABC
            transporter is expressed in wheat mitochondria
  JOURNAL   Mol Gen Genet 246 (1), 91-99 (1995)
   PUBMED   7529870
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013725.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01578.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Geomonas azotofigens"
                     /db_xref="taxon:2843196"
     gene            1..260
                     /gene="ccsA"
     Protein         1..260
                     /product="cytochrome c biogenesis protein CcsA"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /GO_process="GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /calculated_mol_wt=28570
     Region          24..245
                     /region_name="Cytochrom_C_asm"
                     /note="Cytochrome C assembly protein; cl00504"
                     /db_xref="CDD:444942"
ORIGIN      
        1 mstfcyifgf ianydklfra glfsalagfi phvvaiamrw aasgagvtpf isiseslslg
       61 vfmtvlifli aefsikkvlp lgalvmpvaf vllgwagtll kevaatiapa lqsgwiwvhi
      121 tgatigfasv llaagmgfly lfkerndagl aaklpelati drlsyrfvag gfimyglmii
      181 sgaywsntvk gnywnwdpve vwsliswliy giylhlrvtf gwrgtrlawy sliavvvmiv
      241 sywgipfgve tfhagfriqh
//
LOCUS       WP_236026568             186 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphatase PAP2 family protein [Alicyclobacillus suci].
ACCESSION   WP_236026568
VERSION     WP_236026568.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus suci
  ORGANISM  Alicyclobacillus suci
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Neuwald,A.F.
  TITLE     An unexpected structural relationship between integral membrane
            phosphatases and soluble haloperoxidases
  JOURNAL   Protein Sci 6 (8), 1764-1767 (1997)
   PUBMED   9260289
REFERENCE   2  (residues 1 to 186)
  AUTHORS   Stukey,J. and Carman,G.M.
  TITLE     Identification of a novel phosphatase sequence motif
  JOURNAL   Protein Sci 6 (2), 469-472 (1997)
   PUBMED   9041652
REFERENCE   3  (residues 1 to 186)
  AUTHORS   Messerschmidt,A. and Wever,R.
  TITLE     X-ray structure of a vanadium-containing enzyme: chloroperoxidase
            from the fungus Curvularia inaequalis
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 392-396 (1996)
   PUBMED   8552646
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013718.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01569.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Alicyclobacillus suci"
                     /db_xref="taxon:2816080"
     Protein         1..186
                     /product="phosphatase PAP2 family protein"
                     /calculated_mol_wt=20519
     Region          2..145
                     /region_name="PAP2_like"
                     /note="PAP2_like proteins, a super-family of histidine
                     phosphatases and vanadium haloperoxidases, includes type 2
                     phosphatidic acid phosphatase or lipid phosphate
                     phosphatase (LPP), Glucose-6-phosphatase,
                     Phosphatidylglycerophosphatase B and bacterial acid...;
                     cl00474"
                     /db_xref="CDD:469784"
     Site            order(58,64,88..90,124,130,134)
                     /site_type="active"
                     /db_xref="CDD:238813"
ORIGIN      
        1 mldkimiffa kdaleiyavl fviaffalpk rdvehrhalv maglsgilal vinvvishvw
       61 frprpftvlp hgtytelvah ntdasfpsdh asgswgfagg swghntkris rtftviaiiv
      121 mfarvyvgvh yptdvlagmv vgilsgkimw tfsrfiypls triakifkfg psarsakqsk
      181 grshla
//
LOCUS       WP_236026629             464 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidoglycan-binding protein [Alicyclobacillus suci].
ACCESSION   WP_236026629
VERSION     WP_236026629.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus suci
  ORGANISM  Alicyclobacillus suci
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 464)
  AUTHORS   Briers,Y., Volckaert,G., Cornelissen,A., Lagaert,S., Michiels,C.W.,
            Hertveldt,K. and Lavigne,R.
  TITLE     Muralytic activity and modular structure of the endolysins of
            Pseudomonas aeruginosa bacteriophages phiKZ and EL
  JOURNAL   Mol Microbiol 65 (5), 1334-1344 (2007)
   PUBMED   17697255
REFERENCE   2  (residues 1 to 464)
  AUTHORS   Gooley,P.R., O'Connell,J.F., Marcy,A.I., Cuca,G.C., Salowe,S.P.,
            Bush,B.L., Hermes,J.D., Esser,C.K., Hagmann,W.K., Springer,J.P. et
            al.
  TITLE     The NMR structure of the inhibited catalytic domain of human
            stromelysin-1
  JOURNAL   Nat Struct Biol 1 (2), 111-118 (1994)
   PUBMED   7656014
REFERENCE   3  (residues 1 to 464)
  AUTHORS   Foster,S.J.
  TITLE     Cloning, expression, sequence analysis and biochemical
            characterization of an autolytic amidase of Bacillus subtilis 168
            trpC2
  JOURNAL   J Gen Microbiol 137 (8), 1987-1998 (1991)
   PUBMED   1683402
REFERENCE   4  (residues 1 to 464)
  AUTHORS   Dideberg,O., Charlier,P., Dive,G., Joris,B., Frere,J.M. and
            Ghuysen,J.M.
  TITLE     Structure of a Zn2+-containing D-alanyl-D-alanine-cleaving
            carboxypeptidase at 2.5 A resolution
  JOURNAL   Nature 299 (5882), 469-470 (1982)
   PUBMED   7121588
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013625.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01471.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Alicyclobacillus suci"
                     /db_xref="taxon:2816080"
     Protein         1..464
                     /product="peptidoglycan-binding protein"
                     /calculated_mol_wt=49577
     Region          28..95
                     /region_name="PGRP"
                     /note="Peptidoglycan-binding (PGRP) domain of
                     peptidoglycan hydrolases [Cell wall/membrane/envelope
                     biogenesis]; COG3409"
                     /db_xref="CDD:442635"
     Region          <107..261
                     /region_name="LytD"
                     /note="Beta- N-acetylglucosaminidase [Carbohydrate
                     transport and metabolism]; COG4193"
                     /db_xref="CDD:443347"
     Region          313..373
                     /region_name="PGRP"
                     /note="Peptidoglycan-binding (PGRP) domain of
                     peptidoglycan hydrolases [Cell wall/membrane/envelope
                     biogenesis]; COG3409"
                     /db_xref="CDD:442635"
ORIGIN      
        1 mnfkkllaas svpmlltvaa pvavyaqtep tisygsvgsa vttlqkdlks lgysvgpidg
       61 dfgpktlsav ksfqqahklt vdgvvgpqtw salqsathga sftnvdlrys apsdintkti
      121 nsflskngsp mnglgqsfmn aqstygvdan ylvshailes awgksqiala knnlfgygay
      181 dsnpgddagm fpsdsyaimf qawevrnnyl npgsseyvtp tltgmnvhya tdpnwassig
      241 slmnelassa ggnvnqyqqy pstaivsqpk snaepvyyvn gaagttqqnp yyggvpyfss
      301 lsdgmsdmff gplqngssgs gvskvqryln qqigagltvd gqygpataaa vkkfeakhgl
      361 kqdgvwsfam wtkyiytast ptvpagssve idqiaqgmag aygrtlvsyc grglgrfpir
      421 etdkclpfdg cesnqhkhvh sglqfqrqis tnrdvalrrf crrk
//
LOCUS       WP_236026656              68 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial
            [Alicyclobacillus suci].
ACCESSION   WP_236026656
VERSION     WP_236026656.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus suci
  ORGANISM  Alicyclobacillus suci
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Alicyclobacillus suci"
                     /db_xref="taxon:2816080"
     Protein         <1..>68
                     /product="ABC transporter substrate-binding protein"
     Region          <1..>64
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 fppnnvvnll pnlkdpilsq kvvrealsla inrddlankg eygyvqvasp ttilptnkdw
       61 idpnlpaa
//
LOCUS       WP_236025833             278 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome c3 family protein [Geomonas azotofigens].
ACCESSION   WP_236025833
VERSION     WP_236025833.1
KEYWORDS    RefSeq.
SOURCE      Geomonas azotofigens
  ORGANISM  Geomonas azotofigens
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
REFERENCE   1  (residues 1 to 278)
  AUTHORS   Pokkuluri,P.R., Londer,Y.Y., Duke,N.E., Pessanha,M., Yang,X.,
            Orshonsky,V., Orshonsky,L., Erickson,J., Zagyanskiy,Y.,
            Salgueiro,C.A. and Schiffer,M.
  TITLE     Structure of a novel dodecaheme cytochrome c from Geobacter
            sulfurreducens reveals an extended 12 nm protein with interacting
            hemes
  JOURNAL   J Struct Biol 174 (1), 223-233 (2011)
   PUBMED   21130881
REFERENCE   2  (residues 1 to 278)
  AUTHORS   Pokkuluri,P.R., Londer,Y.Y., Yang,X., Duke,N.E., Erickson,J.,
            Orshonsky,V., Johnson,G. and Schiffer,M.
  TITLE     Structural characterization of a family of cytochromes c(7)
            involved in Fe(III) respiration by Geobacter sulfurreducens
  JOURNAL   Biochim Biophys Acta 1797 (2), 222-232 (2010)
   PUBMED   19857457
REFERENCE   3  (residues 1 to 278)
  AUTHORS   Morgado,L., Bruix,M., Orshonsky,V., Londer,Y.Y., Duke,N.E.,
            Yang,X., Pokkuluri,P.R., Schiffer,M. and Salgueiro,C.A.
  TITLE     Structural insights into the modulation of the redox properties of
            two Geobacter sulfurreducens homologous triheme cytochromes
  JOURNAL   Biochim Biophys Acta 1777 (9), 1157-1165 (2008)
   PUBMED   18534185
REFERENCE   4  (residues 1 to 278)
  AUTHORS   Rodrigues,M.L., Oliveira,T.F., Pereira,I.A. and Archer,M.
  TITLE     X-ray structure of the membrane-bound cytochrome c quinol
            dehydrogenase NrfH reveals novel haem coordination
  JOURNAL   EMBO J 25 (24), 5951-5960 (2006)
   PUBMED   17139260
REFERENCE   5  (residues 1 to 278)
  AUTHORS   Pokkuluri,P.R., Londer,Y.Y., Duke,N.E., Erickson,J., Pessanha,M.,
            Salgueiro,C.A. and Schiffer,M.
  TITLE     Structure of a novel c7-type three-heme cytochrome domain from a
            multidomain cytochrome c polymer
  JOURNAL   Protein Sci 13 (6), 1684-1692 (2004)
   PUBMED   15133162
  REMARK    Erratum:[Protein Sci. 2009 Mar;18(3):675]
REFERENCE   6  (residues 1 to 278)
  AUTHORS   Afkar,E. and Fukumori,Y.
  TITLE     Purification and characterization of triheme cytochrome c7 from the
            metal-reducing bacterium, Geobacter metallireducens
  JOURNAL   FEMS Microbiol Lett 175 (2), 205-210 (1999)
   PUBMED   10386369
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025875.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14522.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Geomonas azotofigens"
                     /db_xref="taxon:2843196"
     Protein         1..278
                     /product="cytochrome c3 family protein"
                     /calculated_mol_wt=30305
     Region          70..240
                     /region_name="decahem_SO"
                     /note="decaheme c-type cytochrome, DmsE family; TIGR03508"
                     /db_xref="CDD:274618"
ORIGIN      
        1 mkkstlsllv atlilvasta faakmatvdi pekpemyata paaltpqqca qchtgafngl
       61 ksaggkhrfd cqachtviha ynpkkanydd vmpkcascht dihgpankdc aschnnphtp
      121 rkvamtqrla ttcatchade kaelvkfpsk htnvscdrch tshgfkpscf mchkphfkdq
      181 pieacakchs vhkpkqvtyq gtdwnqtcas chskvanklf nskarhskva caschkakhg
      241 yipqctechk aphpqsiltr fpnclgchld vhdlpsmk
//
LOCUS       WP_236026982             440 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome c3 family protein [Geomonas diazotrophica].
ACCESSION   WP_236026982
VERSION     WP_236026982.1
KEYWORDS    RefSeq.
SOURCE      Geomonas diazotrophica
  ORGANISM  Geomonas diazotrophica
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
REFERENCE   1  (residues 1 to 440)
  AUTHORS   Matias,P.M., Coelho,A.V., Valente,F.M., Placido,D., LeGall,J.,
            Xavier,A.V., Pereira,I.A. and Carrondo,M.A.
  TITLE     Sulfate respiration in Desulfovibrio vulgaris Hildenborough.
            Structure of the 16-heme cytochrome c HmcA AT 2.5-A resolution and
            a view of its role in transmembrane electron transfer
  JOURNAL   J Biol Chem 277 (49), 47907-47916 (2002)
   PUBMED   12356749
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09699.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Geomonas diazotrophica"
                     /db_xref="taxon:2843197"
     Protein         1..440
                     /product="cytochrome c3 family protein"
                     /calculated_mol_wt=47871
     Region          41..83
                     /region_name="Paired_CXXCH_1"
                     /note="Doubled CXXCH motif (Paired_CXXCH_1); pfam09699"
                     /db_xref="CDD:462851"
     Region          92..132
                     /region_name="Paired_CXXCH_1"
                     /note="Doubled CXXCH motif (Paired_CXXCH_1); pfam09699"
                     /db_xref="CDD:462851"
     Region          140..180
                     /region_name="Paired_CXXCH_1"
                     /note="Doubled CXXCH motif (Paired_CXXCH_1); pfam09699"
                     /db_xref="CDD:462851"
     Region          169..>345
                     /region_name="decahem_SO"
                     /note="decaheme c-type cytochrome, DmsE family; TIGR03508"
                     /db_xref="CDD:274618"
     Region          189..229
                     /region_name="Paired_CXXCH_1"
                     /note="Doubled CXXCH motif (Paired_CXXCH_1); pfam09699"
                     /db_xref="CDD:462851"
ORIGIN      
        1 mlsfastala vlalfccspa lgatctatqc haslaalqya hvpvrdgdcs achtskgneh
       61 pvkggksfel aakseglcrd chdgigkkam vhapvkegec lgchephgaa qrfllevged
      121 rtalclnchd akpfkekylh gpvalgfcnt chdphdsgek allkgkvrdv clnchadfgt
      181 rmrqatvvhp pvakdtctac hdphgspyqm fvknklpdlc tgchknvgkv vasakvphkp
      241 mlqeggcpnc hsshygkakg mlladqkalc lgchgtdtlg spplrnisre ldgkaflhgp
      301 lqkgdcrach dphgsnyfrl lkgnypedly fsykdgayda clrchernll rfpettiytk
      361 frngnrnlhy lhvvarkgrt crichephas dgvklinkeg aqfggwkipl hfaitptggs
      421 capgchrefk ydrvkaevyr
//
LOCUS       WP_236026972             622 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome c3 family protein [Geomonas diazotrophica].
ACCESSION   WP_236026972
VERSION     WP_236026972.1
KEYWORDS    RefSeq.
SOURCE      Geomonas diazotrophica
  ORGANISM  Geomonas diazotrophica
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
REFERENCE   1  (residues 1 to 622)
  AUTHORS   Matias,P.M., Coelho,A.V., Valente,F.M., Placido,D., LeGall,J.,
            Xavier,A.V., Pereira,I.A. and Carrondo,M.A.
  TITLE     Sulfate respiration in Desulfovibrio vulgaris Hildenborough.
            Structure of the 16-heme cytochrome c HmcA AT 2.5-A resolution and
            a view of its role in transmembrane electron transfer
  JOURNAL   J Biol Chem 277 (49), 47907-47916 (2002)
   PUBMED   12356749
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09699.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Geomonas diazotrophica"
                     /db_xref="taxon:2843197"
     Protein         1..622
                     /product="cytochrome c3 family protein"
                     /calculated_mol_wt=67312
     Region          <8..180
                     /region_name="decahem_SO"
                     /note="decaheme c-type cytochrome, DmsE family; TIGR03508"
                     /db_xref="CDD:274618"
     Region          196..236
                     /region_name="Cytochrom_C3"
                     /note="Heme-binding domain of the class III cytochrome C
                     family and related proteins; cl23752"
                     /db_xref="CDD:474044"
     Region          224..454
                     /region_name="decahem_SO"
                     /note="decaheme c-type cytochrome, DmsE family; TIGR03508"
                     /db_xref="CDD:274618"
     Region          414..619
                     /region_name="decahem_SO"
                     /note="decaheme c-type cytochrome, DmsE family; TIGR03508"
                     /db_xref="CDD:274618"
ORIGIN      
        1 mkfakkecsd chkkfedkya svkyshsmvk dkkcedchlr hgivpqlilk kdgnalctgc
       61 hapdkigldk pkvhtpiktg kcttchnphg sdakfflkga gneacyqchk kaafekkvvh
      121 kpllekgcra chvahssvya nlltseepal clgchdkggs afkkahgnya veqkkctmch
      181 dphsaeqakl lkvsahppis gggcdgchsp asspkpfevt akkaelckqc hdmaaltggg
      241 mvehlpfkdg nclmchdpha aqaskllvqe gnklcltchk qlsgpmtskh aavsqgkgcl
      301 schkahastk kkllitegad lcyschakvk damkskevhp pfaggecvsc hdphgsnfpd
      361 mlkdrmdnvc fgchsdaesn fkknythkpv ldatcgachk ahssdnkkll saqgsklcvk
      421 chselmkpvn pgtnhvpfae geclschdah asnirgmvtk neavlcatch sdlnknakda
      481 ksthapyadg dctkchsphk aklnklllaq spdlcfnchk avktkvntek phspaqkdcs
      541 tchlphlske kkliveplqt mcaechepgk pgfikahlgi kasdmdcmtc hdphgskdpk
      601 ffksvvhppf agrtcddchi kq
//
LOCUS       WP_236027073             869 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Geomonas diazotrophica].
ACCESSION   WP_236027073
VERSION     WP_236027073.1
KEYWORDS    RefSeq.
SOURCE      Geomonas diazotrophica
  ORGANISM  Geomonas diazotrophica
            Bacteria; Pseudomonadati; Thermodesulfobacteriota;
            Desulfuromonadia; Geobacterales; Geobacteraceae; Geomonas.
REFERENCE   1  (residues 1 to 869)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..869
                     /organism="Geomonas diazotrophica"
                     /db_xref="taxon:2843197"
     Protein         1..869
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=95157
     Region          45..264
                     /region_name="PBP2_BvgS_HisK_like"
                     /note="The type 2 periplasmic ligand-binding protein
                     domain of the sensor-kinase BvgS and histidine kinase
                     receptors, and related proteins; cd01007"
                     /db_xref="CDD:270228"
     Region          356..733
                     /region_name="NtrB"
                     /note="Signal transduction histidine kinase NtrB, nitrogen
                     specific [Signal transduction mechanisms]; COG3852"
                     /db_xref="CDD:443061"
     Region          749..862
                     /region_name="CheY"
                     /note="CheY-like REC (receiver) domain, includes
                     chemotaxis protein CheY and sporulation regulator Spo0F
                     [Signal transduction mechanisms]; COG0784"
                     /db_xref="CDD:440547"
ORIGIN      
        1 mtcirlvvta afllvtvlst lictagqaet gvaltaeeqq wlqrhpiikl apdpdfkpie
       61 ffdengqyqg asadmirlle rklgititvv hlsnwdevle kfkahqvdll gamvrtpnre
      121 kfalftdtlv avpggifars gsrtnltlad lkgkkvavvs nyashdilrt rfpdirlevv
      181 pdvstalakt slgmvdfyve nmanatfyaq qagitnlqla gktdfdyrwg igirkdwpel
      241 qgilnkglaa igkeersgal qkwlyvddlh wapsrtfvig vvaallalll aaaawanyal
      301 kkvvrsrtas lqeelgerkk aeealkalsv eledrvrsrt adlereiaer trseqavaas
      361 elrfrqlfqn vadpvyiadq tgkilaandq aslehgfshe qllamnvgdl davncdadkv
      421 adqikafpas apvtfetvhr rsdgttfpae vkvrriefdn rpavigvarn iserkkaeee
      481 rirleqqllh aqkleslgvl aggiahdfnn iltsiignae lahlrlgpss palenlqrie
      541 asavraadla rqmlaysgkg rfviesidln rllqemghml hvaiskkvvl qyhlaeqlpa
      601 ievdatqirq ivmnlvinas eaigdhdgvi avstgclecr eeylkdawli dpipegsyvs
      661 levsdtgcgm dketlarifd pffttkftgr glgmaavlgi irshkgaikv ysepgkgtcf
      721 kvllpaaage psegvveaep vlwrgegvvl lvddeesirs tgsellrelg fevitaadgc
      781 ealeiyrnhp aialvlldlt mphmdgeqcf relrqvdpav rvimssgfse hevsqkfagk
      841 glagliqkpy klsslrevlr aaspgegpa
//
LOCUS       WP_236027173             639 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3857 domain-containing protein [Gelidibacter pelagius].
ACCESSION   WP_236027173
VERSION     WP_236027173.1
KEYWORDS    RefSeq.
SOURCE      Gelidibacter pelagius
  ORGANISM  Gelidibacter pelagius
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Gelidibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024371.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12969.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Gelidibacter pelagius"
                     /db_xref="taxon:2819985"
     Protein         1..639
                     /product="DUF3857 domain-containing protein"
                     /calculated_mol_wt=74005
     Region          56..178
                     /region_name="DUF3857"
                     /note="Domain of Unknown Function with PDB structure
                     (DUF3857); pfam12969"
                     /db_xref="CDD:432907"
     Region          <267..>349
                     /region_name="YebA"
                     /note="Transglutaminase-like enzyme, putative cysteine
                     protease [Posttranslational modification, protein
                     turnover, chaperones]; COG1305"
                     /db_xref="CDD:440916"
     Region          <558..624
                     /region_name="DUF3858"
                     /note="Domain of Unknown Function with PDB structure
                     (DUF3858); pfam12970"
                     /db_xref="CDD:404007"
ORIGIN      
        1 miriyrlifv lvfpifclaq edkllnsqti pfalrenana vvrwddsyie vkatnkmvht
       61 nkrivtilns sgnskvdafl gydkgvsikk meariynahg kevkkikrnd fedvsavdgg
      121 tlysdsrvky lrytpvdypy tvlfetevey nytayirrwr piegfstste ysryvfrydp
      181 anelnksean feafgvvnqs kdgeihyean nlkaiayeay spnlkditpy amlnlknfsy
      241 egyvgnsndw eglgkwmheq llsgrtrvse ktrneimtlv sglddpidka kvvyqyvqnn
      301 tryisvqegi ggiqpidalk vdevkygdck glsnytkall dlvgvesyyt rvyaspdnlv
      361 dinkdfasfl gqsnhvilnl pyegtniwle ctsqtspfgy nanftddrnv fvirpdggev
      421 vrtkiytaae nlldtkaniv ltedgdieak inlnsygtqy ghheriqyrt ikdqtlhykd
      481 ywrhinnidv lsmnynndkd airfteniel takkyasktg drlflspnff nvlsnvptry
      541 rdrklpfeie rgfhdmdeyv isipenyeve alqndllien kfgkynysit enddhtllfk
      601 rsfilnkgdy vkedyedfrn fylevvkqdq sriilikks
//
LOCUS       WP_236027254             152 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF2625 family protein [Burkholderia].
ACCESSION   WP_236027254
VERSION     WP_236027254.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022399.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10946.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         1..152
                     /product="DUF2625 family protein"
                     /calculated_mol_wt=16732
     Region          <2..137
                     /region_name="DUF2625"
                     /note="Protein of unknown function DUF2625; cl08177"
                     /db_xref="CDD:415472"
ORIGIN      
        1 mdggylrllg sghprlprdi vgwntgrssg flliaddavg gffalnggal gedtgsvyyf
       61 apdtlrwepl eigysdfvrw slseklhdfy aslrwpgwqa dvlhlttdqc fnfypflwtk
      121 egsvehssrk avsvselyal haspgsaasr qp
//
LOCUS       WP_236027408             254 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6090 family protein [Gelidibacter pelagius].
ACCESSION   WP_236027408
VERSION     WP_236027408.1
KEYWORDS    RefSeq.
SOURCE      Gelidibacter pelagius
  ORGANISM  Gelidibacter pelagius
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Gelidibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039649.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19578.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Gelidibacter pelagius"
                     /db_xref="taxon:2819985"
     Protein         1..254
                     /product="DUF6090 family protein"
                     /calculated_mol_wt=29331
     Region          38..175
                     /region_name="DUF6090"
                     /note="Family of unknown function (DUF6090); pfam19578"
                     /db_xref="CDD:437410"
ORIGIN      
        1 mkffrrvrhk lildhkkiqy lkyalgeiil vvigilialq innwnqskkd kislnenlik
       61 ikshtkedle qldelvkgrk qiadlckkar nsilnktend hlflfkisgt afadfyfkpn
      121 sggyeslkns kyygkinntq ldsllakyhr lvddiaener synqftvhqe nyldtqfdrs
      181 lilasafmpl dslatkatpq seydqafiey tatpayrnvi slaawqfdtm idqyheltel
      241 ghliikeids ittg
//
LOCUS       WP_236027410             167 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GspH/FimT family pseudopilin [Burkholderia].
ACCESSION   WP_236027410
VERSION     WP_236027410.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
REFERENCE   1  (residues 1 to 167)
  AUTHORS   Yanez,M.E., Korotkov,K.V., Abendroth,J. and Hol,W.G.
  TITLE     Structure of the minor pseudopilin EpsH from the Type 2 secretion
            system of Vibrio cholerae
  JOURNAL   J Mol Biol 377 (1), 91-103 (2008)
   PUBMED   18241884
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023444.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12019.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         1..167
                     /product="GspH/FimT family pseudopilin"
                     /GO_component="GO:0015627 - type II protein secretion
                     system complex [Evidence IEA]"
                     /GO_process="GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /calculated_mol_wt=18062
     Region          15..>119
                     /region_name="typeII_sec_gspH"
                     /note="type II secretion system protein H; TIGR01708"
                     /db_xref="CDD:130769"
ORIGIN      
        1 mrialvrkrr plasrraagf tllemlvvlv ivgllvavvt lapsrnrrtd laeeaqrlan
       61 llesagdeaq vrsmpiawqa vgggyrfvqr tesgawapmt demyrarrwg aevtgvsvry
      121 tgggetpsri vlgsesidvp vtitlwsgdv rmavvgtgig nfvvrrp
//
LOCUS       WP_236027172             176 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: glycoside hydrolase domain-containing protein
            [Burkholderia].
ACCESSION   WP_236027172
VERSION     WP_236027172.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
REFERENCE   1  (residues 1 to 176)
  AUTHORS   Naumoff,D.G.
  TITLE     GH97 is a new family of glycoside hydrolases, which is related to
            the alpha-galactosidase superfamily
  JOURNAL   BMC Genomics 6, 112 (2005)
   PUBMED   16131397
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 176)
  AUTHORS   Liu,Y., Choudhury,P., Cabral,C.M. and Sifers,R.N.
  TITLE     Oligosaccharide modification in the early secretory pathway directs
            the selection of a misfolded glycoprotein for degradation by the
            proteasome
  JOURNAL   J Biol Chem 274 (9), 5861-5867 (1999)
   PUBMED   10026209
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019583.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07971.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         1..176
                     /product="glycoside hydrolase domain-containing protein"
                     /calculated_mol_wt=19375
     Region          <3..>74
                     /region_name="Glyco_hydro_92"
                     /note="Glycosyl hydrolase family 92; pfam07971"
                     /db_xref="CDD:429762"
ORIGIN      
        1 mpggkspfia rldrtfdpan rptflnnhgi pgltgrsapf fagnapanhv pylhdvagmp
       61 sktqdrvctv mddmdaltpt aghsgftdai pvavaapfvs tgfvalmmre rhrqgspiwt
      121 rrsrrslprf pkrnlkpkpl psrarracig rsrsspdrhr gsarrsraaw rrtamr
//
LOCUS       WP_236027484             727 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Gelidibacter pelagius].
ACCESSION   WP_236027484
VERSION     WP_236027484.1
KEYWORDS    RefSeq.
SOURCE      Gelidibacter pelagius
  ORGANISM  Gelidibacter pelagius
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Gelidibacter.
REFERENCE   1  (residues 1 to 727)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 727)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 727)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 727)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Gelidibacter pelagius"
                     /db_xref="taxon:2819985"
     Protein         1..727
                     /product="ATP-binding protein"
                     /calculated_mol_wt=82425
     Region          62..88
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          63..320
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          100..128
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          140..168
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(141,144..145,148..149,151,181,184..185,188..189,
                     191..192,221,224..225,228..229,232)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          173..209
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          219..248
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <340..705
                     /region_name="PRK11091"
                     /note="aerobic respiration control sensor protein ArcB;
                     Provisional"
                     /db_xref="CDD:236842"
ORIGIN      
        1 mtlfaqnnat edidilkmrv enyitqsgfe tergdyynak enlekalaia kqigdkkseg
       61 sihtkiakvq fiveepenal vsltkaaelq retndyanla itynirgilh tskkeypial
      121 dyfnsaktkf eeeglerlia dvnlneakvy ielgdyktak aklektiila kkhdqigvls
      181 sayinsgkal hkldnedlal smakkglela itnnipeyin dgyltlsdiy qanedyklsn
      241 eylrkhiqls dslldikren lspekkaqfi teykdserkq mevkleeada snnltritti
      301 lsialitils lltlslyknn nirlktnnml hkkndeliva kekaelaskt kanflstvth
      361 elrtplyavt gltnmlldee pkpdqlphlk slkfsgdyll tfindilqin kieankvdld
      421 pevfnlqkkv envvsalsns amdnnvqlhy eyddslpstf iadqlkisqi linlignaik
      481 ftkdgdiwvr lkkhsqtedk yiirfeiedn gigitkekqe nmfesfsqgs iqinrkyggt
      541 glglsivkgl ieilkgkiyl kselgkgstf vfeipllyap epvittkpkt lnefntldlt
      601 nikilvvedn kinqmitrki lnkmnlycdv vdngedavdr vqqeqydvvl mdihmpgisg
      661 ieatkiirtf dkeltifalt avtiedkmqe fdeagfddii skpfkqedfe kklynelksn
      721 qksatsi
//
LOCUS       WP_236027506             157 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline
            decarboxylase [Burkholderia].
ACCESSION   WP_236027506
VERSION     WP_236027506.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Ramazzina,I., Folli,C., Secchi,A., Berni,R. and Percudani,R.
  TITLE     Completing the uric acid degradation pathway through phylogenetic
            comparison of whole genomes
  JOURNAL   Nat Chem Biol 2 (3), 144-148 (2006)
   PUBMED   16462750
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09349.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         1..157
                     /product="2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline
                     decarboxylase"
                     /calculated_mol_wt=18074
     Region          <76..157
                     /region_name="PucL"
                     /note="2-oxo-4-hydroxy-4-carboxy--5-ureidoimidazoline
                     (OHCU) decarboxylase (uric acid degradation) [Nucleotide
                     transport and metabolism]; COG3195"
                     /db_xref="CDD:442428"
ORIGIN      
        1 mnrrgsrhrf lsfwpqavet kralfifitl rtrlthpvmp aayaillnrp atahrpnhpa
       61 pqrkkthpps sgkavseqts agldaltdde eirlqrmnra yreqhgfpfi icvrhytkag
      121 mffelesrvs renafeldsa lnqikaitrr rldqrva
//
LOCUS       WP_236027517             707 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein, partial [Helicobacter cinaedi].
ACCESSION   WP_236027517
VERSION     WP_236027517.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter cinaedi
  ORGANISM  Helicobacter cinaedi
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Helicobacter cinaedi"
                     /db_xref="taxon:213"
     Protein         <1..707
                     /product="helicase-related protein"
     Region          16..>646
                     /region_name="COG4889"
                     /note="Predicted helicase [General function prediction
                     only]"
                     /db_xref="CDD:443917"
ORIGIN      
        1 nnlkvkdskd yknpkiiifs tyqsidviie tqklfnqefk liindeahrt agvqkldeqw
       61 nakdisvwqk thdntllkak yrlyltatpr iysskakdel gkkskgkdll lfsmddetlf
      121 gkeiyelkfs kaisekllsd frvvisyire eylaeylgkl tkaqensklt ienagkmisf
      181 analnkinms fvdengihea ykddtkpmkk avvyhssirn skfvtekfpk isrniilrhi
      241 dgthnaykka eqlfwlsdng decrvlsnak cltegidvps ldavcffdkr dsmvdivqav
      301 grairksegk kygyiilplv lsdeeiknyd ktlkgdkfki vwhtlkalrs hderlidear
      361 iaeivslltd ssgitelpea tlftleelfn emknavpknl gdlqywenya skvgdimqkl
      421 mlriqallds ssaiqklfat fckalqsnln asfneseaia lvaqhiitkp iftcifpsld
      481 fatfdkvsae leklhsklle qglsaetqtl ekfytsaqes ahyarsdksk qnliknlydt
      541 lfkeafkktq eklgivytpi egvdfiihst qyllqkhfgk slgdrhihia dpfvgtgtfi
      601 trliqsgyld snleskftke lwaneitllg yyiaqiniat tyherlvalg dsdlgeqcgs
      661 vvdfvkgtna kfanlpqnpq sshsptanlr ileeekqagr entpppp
//
LOCUS       WP_236027535             158 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: transposase [Burkholderia].
ACCESSION   WP_236027535
VERSION     WP_236027535.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
REFERENCE   1  (residues 1 to 158)
  AUTHORS   Ronning,D.R., Guynet,C., Ton-Hoang,B., Perez,Z.N., Ghirlando,R.,
            Chandler,M. and Dyda,F.
  TITLE     Active site sharing and subterminal hairpin recognition in a new
            class of DNA transposases
  JOURNAL   Mol Cell 20 (1), 143-154 (2005)
   PUBMED   16209952
REFERENCE   2  (residues 1 to 158)
  AUTHORS   Brynestad,S., Synstad,B. and Granum,P.E.
  TITLE     The Clostridium perfringens enterotoxin gene is on a transposable
            element in type A human food poisoning strains
  JOURNAL   Microbiology (Reading) 143 (Pt 7), 2109-2115 (1997)
   PUBMED   9245800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013921.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01797.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         1..158
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=17394
     Region          2..>79
                     /region_name="Y1_Tnp"
                     /note="Transposase IS200 like; cl00848"
                     /db_xref="CDD:469954"
ORIGIN      
        1 mtqyrrevft qailddlrsi lirvstdfea erveldeegn hirvqanhpp kvtvsplvgr
       61 lnnvsnskir ekiyrgirks vvvvllrwkp lrcapgdhsp ahrtaadtam ttertptvst
      121 lsfpglmakg avhparvrav tdsddecsaa ercaapgr
//
LOCUS       WP_236027554             195 aa            linear   BCT 02-MAR-2025
DEFINITION  SPASM domain-containing protein, partial [Helicobacter cinaedi].
ACCESSION   WP_236027554
VERSION     WP_236027554.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter cinaedi
  ORGANISM  Helicobacter cinaedi
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 195)
  AUTHORS   Haft,D.H. and Basu,M.K.
  TITLE     Biological systems discovery in silico: radical
            S-adenosylmethionine protein families and their target peptides for
            posttranslational modification
  JOURNAL   J Bacteriol 193 (11), 2745-2755 (2011)
   PUBMED   21478363
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024584.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13186.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Helicobacter cinaedi"
                     /db_xref="taxon:213"
     Protein         <1..195
                     /product="SPASM domain-containing protein"
     Region          <4..142
                     /region_name="AslB"
                     /note="Sulfatase maturation enzyme AslB, radical SAM
                     superfamily [Posttranslational modification, protein
                     turnover, chaperones]; COG0641"
                     /db_xref="CDD:440406"
     Region          104..157
                     /region_name="SPASM"
                     /note="Iron-sulfur cluster-binding SPASM domain; cl41754"
                     /db_xref="CDD:477760"
ORIGIN      
        1 rsikdahqra lnaldyasea gmaafpnvif ghynakdpdl falldyakak gytsylimam
       61 pfgslkedrm taedfkildg irknydvvfn twdmydktqt kisgcwtvnr tyitplgevl
      121 vcpyinisig nikeqslkei ldygfsikyf gefspicisa hnfkfrekfl pedrtiftpy
      181 kakeifgked yieqc
//
LOCUS       WP_236027591             154 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Helicobacter
            cinaedi].
ACCESSION   WP_236027591
VERSION     WP_236027591.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter cinaedi
  ORGANISM  Helicobacter cinaedi
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 154)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Helicobacter cinaedi"
                     /db_xref="taxon:213"
     Protein         <1..>154
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <16..>154
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            59..92
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 vnnltnltns qassleqtaq aveeitssmq nvsgktsevi qqsediknvi giirdiadqt
       61 nllalnaaie aaragehgrg favvadevrk laertqkslg eieantnllv qsindmgesi
      121 reqttgvtki neaishlesv tqenveians saei
//
LOCUS       WP_236027622             318 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: phosphotransferase [Burkholderia].
ACCESSION   WP_236027622
VERSION     WP_236027622.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
REFERENCE   1  (residues 1 to 318)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 318)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         1..318
                     /product="phosphotransferase"
                     /calculated_mol_wt=34211
     Region          3..260
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(22..25,28,30,41,43,74,97..100,193,197..198,200,
                     210..211)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
ORIGIN      
        1 mktlepwlhr ywnigparvq alasghtnkt ylvecdsara vlrvswsgkp veqvhreaai
       61 lgrlrtapml palprlrptv daqsgvqlpd gswlhlfehi dgipglpgdg eagaldamra
      121 lahlhaalaa ipatesapla wlsarharva araapslpgg lsghyetmir rigahldaaa
      181 hwltgavhwl hgdyhggnll yvghavngvl dfddvgqgaq wleaafalfa lsrdagrddr
      241 fvfdaqcwda glqayaatrp dpapdwmrdr rdaltalfca dqtlihleaa qrglwtpgpg
      301 igflggwrql ldgaapgr
//
LOCUS       WP_236027670             326 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: AAA family ATPase [Burkholderia].
ACCESSION   WP_236027670
VERSION     WP_236027670.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025052.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13671.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         1..326
                     /product="AAA family ATPase"
                     /calculated_mol_wt=36061
     Region          19..>85
                     /region_name="RnaY"
                     /note="HD superfamily phosphodieaserase, includes HD
                     domain of RNase Y [Translation, ribosomal structure and
                     biogenesis, General function prediction only]; COG1418"
                     /db_xref="CDD:441028"
     Region          185..324
                     /region_name="COG4639"
                     /note="Predicted kinase [General function prediction
                     only]"
                     /db_xref="CDD:443677"
ORIGIN      
        1 mmvidallal pgyqaasrad qeivflaall hdiakysttv vdpvtgaigh pghsrkgaid
       61 arialwdagm pfavreaicr miavhqvpff amsgsrrgtp efiarelswq vslpllclla
      121 eadmrgricd dtqrvldnie lfrelareeg cygqprafad ahtalsyfrg advhpdyplf
      181 rtpgsqvivm sglpasgknt wvarhhpalp vvsfddarda lglrhgqneg avahhavdaa
      241 kallrerkpf vwnatnlspl mrkktldllf aygadvtlvy leqpraellr rnarrdtslt
      301 nrtleamllr wdlplpteah avryev
//
LOCUS       WP_236027700              49 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF1427 family protein [Burkholderia].
ACCESSION   WP_236027700
VERSION     WP_236027700.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018891.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07235.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..49
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         1..49
                     /product="DUF1427 family protein"
                     /calculated_mol_wt=4937
     Region          3..>49
                     /region_name="DUF1427"
                     /note="Protein of unknown function (DUF1427); cl01771"
                     /db_xref="CDD:470337"
ORIGIN      
        1 mdyvislavg lgvgvlyall hvrspapplv alvgllgmvi geraiallr
//
LOCUS       WP_236027759              25 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF933 domain-containing protein, partial [Helicobacter cinaedi].
ACCESSION   WP_236027759
VERSION     WP_236027759.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter cinaedi
  ORGANISM  Helicobacter cinaedi
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017847.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06071.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..25
                     /organism="Helicobacter cinaedi"
                     /db_xref="taxon:213"
     Protein         <1..25
                     /product="DUF933 domain-containing protein"
     Region          <1..25
                     /region_name="GTP1"
                     /note="Ribosome-binding ATPase YchF, GTP1/OBG family
                     [Translation, ribosomal structure and biogenesis];
                     COG0012"
                     /db_xref="CDD:439783"
ORIGIN      
        1 agamriegke yivqdgdimh frfnv
//
LOCUS       WP_236027768             199 aa            linear   BCT 02-MAR-2025
DEFINITION  SPASM domain-containing protein, partial [Helicobacter cinaedi].
ACCESSION   WP_236027768
VERSION     WP_236027768.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter cinaedi
  ORGANISM  Helicobacter cinaedi
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 199)
  AUTHORS   Haft,D.H. and Basu,M.K.
  TITLE     Biological systems discovery in silico: radical
            S-adenosylmethionine protein families and their target peptides for
            posttranslational modification
  JOURNAL   J Bacteriol 193 (11), 2745-2755 (2011)
   PUBMED   21478363
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024584.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13186.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Helicobacter cinaedi"
                     /db_xref="taxon:213"
     Protein         <1..199
                     /product="SPASM domain-containing protein"
     Region          <8..146
                     /region_name="AslB"
                     /note="Sulfatase maturation enzyme AslB, radical SAM
                     superfamily [Posttranslational modification, protein
                     turnover, chaperones]; COG0641"
                     /db_xref="CDD:440406"
     Region          108..161
                     /region_name="SPASM"
                     /note="Iron-sulfur cluster-binding SPASM domain; cl41754"
                     /db_xref="CDD:477760"
ORIGIN      
        1 ggggrsikda hqralnaldy aseagmaafp nvifghynak dpdlfalldy akakgytsyl
       61 imampfgslk edrmtaedfk ildgirknyd vvfntwdmyd ktqtkisgcw tvnrtyitpl
      121 gevlvcpyin isignikeqs lkeildygfs ikyfgefspi cisahnfkfr ekflpedrti
      181 ftpykakeif gkedyieqc
//
LOCUS       WP_236027855             124 aa            linear   BCT 02-MAR-2025
DEFINITION  lipid-A-disaccharide synthase N-terminal domain-containing protein
            [Candidatus Methylacidithermus pantelleriae].
ACCESSION   WP_236027855
VERSION     WP_236027855.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Methylacidithermus pantelleriae
  ORGANISM  Candidatus Methylacidithermus pantelleriae
            Bacteria; Pseudomonadati; Verrucomicrobiota; Methylacidiphilae;
            Methylacidiphilales; Methylacidiphilaceae; Candidatus
            Methylacidithermus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019214.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07578.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Candidatus Methylacidithermus pantelleriae"
                     /db_xref="taxon:2744239"
     Protein         1..124
                     /product="lipid-A-disaccharide synthase N-terminal
                     domain-containing protein"
                     /GO_function="GO:0008915 - lipid-A-disaccharide synthase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=14409
     Region          20..109
                     /region_name="LABN"
                     /note="Uncharacterized N-terminal domain of
                     lipid-A-disaccharide synthase [General function prediction
                     only]; COG3952"
                     /db_xref="CDD:443152"
ORIGIN      
        1 mnparlsfsl mneilgatnw lgiqwhpmkv vgwlgnllff srfliqwias erakrvvvpi
       61 afwycsllgs llllayalyk rdsvfifayv ftwipygrnl yfayrdrtks hpkraphpel
      121 ppds
//
LOCUS       WP_236027765             117 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Helicobacter
            cinaedi].
ACCESSION   WP_236027765
VERSION     WP_236027765.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter cinaedi
  ORGANISM  Helicobacter cinaedi
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 117)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Helicobacter cinaedi"
                     /db_xref="taxon:213"
     Protein         <1..>117
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          14..>114
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            58..91
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 nnltnltnsq assleqtaqa veeitssmqn vsgktseviq qsediknvig iirdiadqtn
       61 llalnaaiea aragehgrgf avvadevrkl aertqkslge ieantnllvq sindmge
//
LOCUS       WP_236027865             315 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramoyl-L-alanine amidase-like domain-containing protein
            [Candidatus Methylacidithermus pantelleriae].
ACCESSION   WP_236027865
VERSION     WP_236027865.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Methylacidithermus pantelleriae
  ORGANISM  Candidatus Methylacidithermus pantelleriae
            Bacteria; Pseudomonadati; Verrucomicrobiota; Methylacidiphilae;
            Methylacidiphilales; Methylacidiphilaceae; Candidatus
            Methylacidithermus.
REFERENCE   1  (residues 1 to 315)
  AUTHORS   Xu,Q., Mengin-Lecreulx,D., Patin,D., Grant,J.C., Chiu,H.J.,
            Jaroszewski,L., Knuth,M.W., Godzik,A., Lesley,S.A., Elsliger,M.A.,
            Deacon,A.M. and Wilson,I.A.
  TITLE     Structure-guided functional characterization of DUF1460 reveals a
            highly specific NlpC/P60 amidase family
  JOURNAL   Structure 22 (12), 1799-1809 (2014)
   PUBMED   25465128
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018963.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07313.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Candidatus Methylacidithermus pantelleriae"
                     /db_xref="taxon:2744239"
     Protein         1..315
                     /product="N-acetylmuramoyl-L-alanine amidase-like
                     domain-containing protein"
                     /calculated_mol_wt=35700
     Region          68..293
                     /region_name="DUF1460"
                     /note="Protein of unknown function (DUF1460); pfam07313"
                     /db_xref="CDD:429403"
ORIGIN      
        1 mkgrinrisv fmlflafsss wgagctcwga iclplnrvfr gqdrfyrlva raqaegwryl
       61 plgdrvvrvg lalcgtpych ytlevddrie spsanfegmd cwtffeisla farmlklkdh
      121 dyrpedllhl ieleryrggh ctgnylsrih fleelfadnq argllvnltp slggvpihrh
      181 vremtagwrq yrylranpsl lpamaqieer vsrlpvtyip kervrevere lqngdiiaiv
      241 srdeggytsh vglayrdasg vlrfmhassi ygkvvvdrri sgylnehpgt agitvarpke
      301 vppalftlsq pgerl
//
LOCUS       WP_236028116             378 aa            linear   BCT 02-MAR-2025
DEFINITION  FtsW/RodA/SpoVE family cell cycle protein [Bifidobacterium
            pongonis].
ACCESSION   WP_236028116
VERSION     WP_236028116.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium pongonis
  ORGANISM  Bifidobacterium pongonis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 378)
  AUTHORS   Henriques,A.O., Glaser,P., Piggot,P.J. and Moran,C.P. Jr.
  TITLE     Control of cell shape and elongation by the rodA gene in Bacillus
            subtilis
  JOURNAL   Mol Microbiol 28 (2), 235-247 (1998)
   PUBMED   9622350
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013279.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01098.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Bifidobacterium pongonis"
                     /db_xref="taxon:2834432"
     Protein         1..378
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0051301 - cell division [Evidence IEA]"
                     /calculated_mol_wt=39812
     Region          11..367
                     /region_name="FTSW_RODA_SPOVE"
                     /note="Cell cycle protein; cl00511"
                     /db_xref="CDD:469799"
ORIGIN      
        1 msslfnplwc yhgfimavvg lsvfgvimvf sssavsaaaa gkspfvssls qlvffliglv
       61 agavcsrmpi alyqrfgfva vvvagilqal tftslgvgqy gndgwisvgg itiqpaefvk
      121 falcvwlpsa lvvankryet kgiraygmag vvygllllmi lggkdlgtam ivvfigvaaf
      181 lvagfplkwm aglvgtlgsi vlvmimssqn rrdrilaays sctaadtqni cyqsmhakya
      241 iasggmfgvg lgnsrekwny lpaahndfif aiigeetgfi gaamvilifv ilgwclvfsa
      301 vqikqsyssi almciatwlv gqavvnigvv vgvfpvfgvp mpfvsaggss mimclmvsgv
      361 amslmrqqpq ikaasqrv
//
LOCUS       WP_236028123             619 aa            linear   BCT 02-MAR-2025
DEFINITION  FtsK/SpoIIIE domain-containing protein [Bifidobacterium pongonis].
ACCESSION   WP_236028123
VERSION     WP_236028123.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium pongonis
  ORGANISM  Bifidobacterium pongonis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 619)
  AUTHORS   Begg,K.J., Dewar,S.J. and Donachie,W.D.
  TITLE     A new Escherichia coli cell division gene, ftsK
  JOURNAL   J Bacteriol 177 (21), 6211-6222 (1995)
   PUBMED   7592387
REFERENCE   2  (residues 1 to 619)
  AUTHORS   Wu,L.J. and Errington,J.
  TITLE     Bacillus subtilis SpoIIIE protein required for DNA segregation
            during asymmetric cell division
  JOURNAL   Science 264 (5158), 572-575 (1994)
   PUBMED   8160014
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013727.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01580.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Bifidobacterium pongonis"
                     /db_xref="taxon:2834432"
     Protein         1..619
                     /product="FtsK/SpoIIIE domain-containing protein"
                     /GO_function="GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=66253
     Region          <127..>340
                     /region_name="T7_EssCb_Firm"
                     /note="type VII secretion protein EssC, C-terminal domain;
                     TIGR03928"
                     /db_xref="CDD:274860"
ORIGIN      
        1 mlvmlmpmag qlmliammva frqwmfaamm vpsmlgclas lalarvqrvs egsavggvgq
       61 dsasrmalsp aaspgdsygv sgcgnaddvv alqrlasvdl eallglrrev dplpwrtvar
      121 qwllpfsldv pvgmaehdav rldlsrqgph alvagttgsg ksvllqswcl amavrnppdr
      181 vqfvfldfkg gtafrplerl phcvgnvcdl dlqhavralh aldvelkrre rlvaeqrahd
      241 vsalqsappr lvvvidefha lrdqlpdvvn rivriaslgr slgmhviact qhpvgqvsse
      301 mkanmtlglc lrvrdalqsv eilgsgraan ippslpgvvy cndgegveaw rcaaakdiar
      361 mvdavvlaar yhgtvpppal fsaplprtvt rlpavppsrd tscgvpfala ddgvtlhtav
      421 mpldhgnigv igpqgrgkta llaqlarrlc dgtvgadsav gavavrwtrr gaigyethtm
      481 peydcvpdmp ddmpddmpdi tqgdaraeps rlvwlvddad plfdpfcadp laaklreala
      541 dhtiivvfav essrhvripe qcavrvvfpt adkatdqmng ipgalwdsfd vesltlpgra
      601 vfidrarvvp vqcsfgdss
//
LOCUS       WP_236028212             124 aa            linear   BCT 02-MAR-2025
DEFINITION  SRPBCC domain-containing protein [Paractinoplanes lichenicola].
ACCESSION   WP_236028212
VERSION     WP_236028212.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes lichenicola
  ORGANISM  Paractinoplanes lichenicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 124)
  AUTHORS   Stark,J.L., Mercier,K.A., Mueller,G.A., Acton,T.B., Xiao,R.,
            Montelione,G.T. and Powers,R.
  TITLE     Solution structure and function of YndB, an AHSA1 protein from
            Bacillus subtilis
  JOURNAL   Proteins 78 (16), 3328-3340 (2010)
   PUBMED   20818668
REFERENCE   2  (residues 1 to 124)
  AUTHORS   Lotz,G.P., Lin,H., Harst,A. and Obermann,W.M.
  TITLE     Aha1 binds to the middle domain of Hsp90, contributes to client
            protein activation, and stimulates the ATPase activity of the
            molecular chaperone
  JOURNAL   J Biol Chem 278 (19), 17228-17235 (2003)
   PUBMED   12604615
REFERENCE   3  (residues 1 to 124)
  AUTHORS   Panaretou,B., Siligardi,G., Meyer,P., Maloney,A., Sullivan,J.K.,
            Singh,S., Millson,S.H., Clarke,P.A., Naaby-Hansen,S., Stein,R.,
            Cramer,R., Mollapour,M., Workman,P., Piper,P.W., Pearl,L.H. and
            Prodromou,C.
  TITLE     Activation of the ATPase activity of hsp90 by the stress-regulated
            cochaperone aha1
  JOURNAL   Mol Cell 10 (6), 1307-1318 (2002)
   PUBMED   12504007
REFERENCE   4  (residues 1 to 124)
  AUTHORS   Sevier,C.S. and Machamer,C.E.
  TITLE     p38: A novel protein that associates with the vesicular stomatitis
            virus glycoprotein
  JOURNAL   Biochem Biophys Res Commun 287 (2), 574-582 (2001)
   PUBMED   11554768
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08327.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Paractinoplanes lichenicola"
                     /db_xref="taxon:2802976"
     Protein         1..124
                     /product="SRPBCC domain-containing protein"
                     /calculated_mol_wt=14099
     Region          13..>97
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
ORIGIN      
        1 mthieadpal piiritrefq atparllrah tepdlfarwi gpdslrtrie hwdartggsf
       61 ryvserdgee wafrgcfhei rpdrlvqtft yegdpdggga qhavvrrarr rphpaphava
      121 grql
//
LOCUS       WP_236027907             319 aa            linear   BCT 02-MAR-2025
DEFINITION  dihydropteroate synthase [Candidatus Methylacidithermus
            pantelleriae].
ACCESSION   WP_236027907
VERSION     WP_236027907.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Methylacidithermus pantelleriae
  ORGANISM  Candidatus Methylacidithermus pantelleriae
            Bacteria; Pseudomonadati; Verrucomicrobiota; Methylacidiphilae;
            Methylacidiphilales; Methylacidiphilaceae; Candidatus
            Methylacidithermus.
REFERENCE   1  (residues 1 to 319)
  AUTHORS   Doukov,T., Seravalli,J., Stezowski,J.J. and Ragsdale,S.W.
  TITLE     Crystal structure of a methyltetrahydrofolate- and
            corrinoid-dependent methyltransferase
  JOURNAL   Structure 8 (8), 817-830 (2000)
   PUBMED   10997901
REFERENCE   2  (residues 1 to 319)
  AUTHORS   Achari,A., Somers,D.O., Champness,J.N., Bryant,P.K., Rosemond,J.
            and Stammers,D.K.
  TITLE     Crystal structure of the anti-bacterial sulfonamide drug target
            dihydropteroate synthase
  JOURNAL   Nat Struct Biol 4 (6), 490-497 (1997)
   PUBMED   9187658
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013007.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00809.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Candidatus Methylacidithermus pantelleriae"
                     /db_xref="taxon:2744239"
     Protein         1..319
                     /product="dihydropteroate synthase"
                     /EC_number="2.5.1.15"
                     /calculated_mol_wt=35905
     Region          56..308
                     /region_name="Pterin_binding"
                     /note="Pterin binding enzymes. This family includes
                     dihydropteroate synthase (DHPS) and cobalamin-dependent
                     methyltransferases such as methyltetrahydrofolate,
                     corrinoid iron-sulfur protein methyltransferase (MeTr) and
                     methionine synthase (MetH). DHPS, a...; cl00219"
                     /db_xref="CDD:444759"
     Site            order(63,136,155,156,179,224,250,254,296,298)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:238242"
     Site            order(238,242..243,283,290,305..306)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238242"
     Site            252..254
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:238242"
ORIGIN      
        1 mvvygckngk krrfcncvml slpelsalwe tykedwqcpv qefslgphvf tqqgapyimg
       61 vinlspdswy resvvlntea aiergklltl sgasivdlga essllharra sieeqkqafl
      121 pivrelaeqn vlvsvetyya dvalaglkag ariinltgpr esrkiyamvg afdaaviiny
      181 vegpnvrevg eirlvadpia plyeyfarei elaskagvkr iwvdpglgfy ysnlqdsaer
      241 vrrqmeiflg tfrlrrlgwp tchalphafe yfeeevrvae pffavlailg ktdllrthev
      301 rkvrgvvrsl qiyhpklar
//
LOCUS       WP_236028420            1190 aa            linear   BCT 02-MAR-2025
DEFINITION  SpoIIE family protein phosphatase [Paractinoplanes lichenicola].
ACCESSION   WP_236028420
VERSION     WP_236028420.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes lichenicola
  ORGANISM  Paractinoplanes lichenicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 1190)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Paractinoplanes lichenicola"
                     /db_xref="taxon:2802976"
     Protein         1..1190
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=127366
     Region          306..538
                     /region_name="KdpD"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; COG2205"
                     /db_xref="CDD:441807"
     Region          594..696
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Region          646..1063
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
     Site            order(688..691,693)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
     Region          1072..1188
                     /region_name="RsbW"
                     /note="Anti-sigma regulatory factor (Ser/Thr protein
                     kinase) [Signal transduction mechanisms]; COG2172"
                     /db_xref="CDD:441775"
ORIGIN      
        1 mgassdgvlp sqlrvaferg gemgrrmaal dwsasplgpp agwapelrna vatmlasraq
       61 miifwgpeyc slyndayiat mgtkhpaflg rpghemwaea wsvletlfdg vvgsgeafwa
      121 adhpfmlerh gfleetyfdi sydpirtaag tvdgifcivt dttgrvlger rvgtlsalgs
      181 rlagspdqas laaevaavfa enaadvpyae lildddaasa hplvrrviqt grpasaalse
      241 ltgapsadad ealvlpvtvg maragalvig vsrflalggg yrdflelaaa qisravgnlr
      301 ayeqerarav elaaldrakt nffsnvshef rtpltlilgp ledllddpel pgeqrerlqp
      361 mrrnalrllk lvntvldfsr lesgrlraay rptdladyta rlastfrsaa eraglelvvd
      421 applpgpvhv dremwekivl nllsnavkft phgrievrir avdrgaeliv rdtgigipad
      481 qlpllfdrfh rvtgiwsrsh egtgiglalv relaelhggs agvesepgeg svftvtvpfg
      541 tahlpadrit eggdrivpei darpyveeae hwwagdqasg plpgpapadr prgrillvdd
      601 nadlrdhlsr llrpswevtt avdgraalel agreqfdlvl tdvmmprldg fgliaalrag
      661 ertrdvpivv lsarageeas seglaagadd ylvkpfsard ltarvranld lgqarrrvld
      721 rlrelvdtaa avnsvrttae vldvaaqhvr dmasagrvvv tvpgaraevd agadplsapd
      781 valpltdtsg atvgelrvwa spqgtpepav laqlarligl rlenarlyea ehriattlqh
      841 sllpqslpql pgavvasryl pgsseaevgg dwydviaaqd eqlflvigdv vgkgvqaaag
      901 mgqlrnalra yilegfdcgd altrlnrlvd nlgrrqfatv vcvrfdpreg rlyyssaghp
      961 ppvvvppgel gsflynsalg ppigalsdvd yptlsapmpt ggrlllytdg lvedrrtgid
     1021 aglaeltada akpaenvedl ldtllakaak rtrrddiall aleatepref vlrlpaepaq
     1081 lsvvrrrlde fltahavpea dafdlsvavs eaaanaiehp iepaepfitv easvaegavt
     1141 ivvrdsgswr psesggfrgr glaligalse lsvlrspegt svtlrrpfsp
//
LOCUS       WP_236028434             144 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6069 family protein [Paractinoplanes lichenicola].
ACCESSION   WP_236028434
VERSION     WP_236028434.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes lichenicola
  ORGANISM  Paractinoplanes lichenicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 144)
  AUTHORS   Salem,S.M., Weidenbach,S. and Rohr,J.
  TITLE     Two Cooperative Glycosyltransferases Are Responsible for the Sugar
            Diversity of Saquayamycins Isolated from Streptomyces sp. KY 40-1
  JOURNAL   ACS Chem Biol 12 (10), 2529-2534 (2017)
   PUBMED   28892347
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039977.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19545.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Paractinoplanes lichenicola"
                     /db_xref="taxon:2802976"
     Protein         1..144
                     /product="DUF6069 family protein"
                     /calculated_mol_wt=14521
ORIGIN      
        1 mviaavvvma avvnllvfvv gralggsfef tsngvvnqvd altvvgfsav plliglvvvv
       61 llvrfgdwvt rtativapvl avvtilvmtl padldgasti alslchvtla pisvaavral
      121 grlprirage ssgpaelrga qngv
//
LOCUS       WP_236028458             504 aa            linear   BCT 02-MAR-2025
DEFINITION  ricin-type beta-trefoil lectin domain protein [Paractinoplanes
            lichenicola].
ACCESSION   WP_236028458
VERSION     WP_236028458.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes lichenicola
  ORGANISM  Paractinoplanes lichenicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012859.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00652.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Paractinoplanes lichenicola"
                     /db_xref="taxon:2802976"
     Protein         1..504
                     /product="ricin-type beta-trefoil lectin domain protein"
                     /calculated_mol_wt=51599
     Region          123..170
                     /region_name="Pro_Al_protease"
                     /note="Alpha-lytic protease prodomain; pfam02983"
                     /db_xref="CDD:460772"
     Region          190..366
                     /region_name="alphaLP-like"
                     /note="alpha-lytic protease (alpha-LP), a bacterial serine
                     protease of the chymotrypsin family, and similar proteins;
                     cd21112"
                     /db_xref="CDD:411050"
     Site            order(218,242,276,279..283,285,293..297,300,304..307,309,
                     317,322..327,342..344,349,353)
                     /site_type="other"
                     /note="pro domain interface [polypeptide binding]"
                     /db_xref="CDD:411050"
     Site            order(218,305,307,309,322..327,342..344)
                     /site_type="other"
                     /note="peptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:411050"
     Region          388..502
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cl49609"
                     /db_xref="CDD:483949"
     Site            order(392..394,405,407,414..415)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(433..434,446,448,455..456)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(476..478,489,491,498..499)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
ORIGIN      
        1 mrprsrllai aaavvtaatl splpaaqaap apapsadidp gmlsamrrdl kltdaqietr
       61 lrteaaapvv ekrlkaklgs afagawipsg asrltvavts ssaidavrae gadarlvgas
      121 asdltllrdk ldkkassara sgvrgwyvdt pnnrvvvmaa pgstaaaraf ggdsvtvvta
      181 eqprplydtr ggdqyvingn tlcsvgfsva ggfvtaghcg gtgsptlgyn nvaqgtfags
      241 sfpgndyawv rtngnwtsqp wvnnyaggnv tvagsqdaai gssicrsgrt sgwrcgtllg
      301 rnetivysqg avsglsrsna caepgdsggs wisgnqaqgv tsggsgncss ggtmwfqpvn
      361 eilqvyglsl tttgggsggs siisslnnkc idvpngnfsd gvqlqmwgcn ntaaqkfnfv
      421 ngtlqtsnnk cvdvawgsta ngaiiqivtc sgnpaqqwvl saagdlvnpq ankcididaw
      481 npndgaklll wechgganqk wrrg
//
LOCUS       WP_236028474             401 aa            linear   BCT 02-MAR-2025
DEFINITION  VWA domain-containing protein [Paractinoplanes lichenicola].
ACCESSION   WP_236028474
VERSION     WP_236028474.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes lichenicola
  ORGANISM  Paractinoplanes lichenicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 401)
  AUTHORS   Santiago,B., Schubel,U., Egelseer,C. and Meyer,O.
  TITLE     Sequence analysis, characterization and CO-specific transcription
            of the cox gene cluster on the megaplasmid pHCG3 of Oligotropha
            carboxidovorans
  JOURNAL   Gene 236 (1), 115-124 (1999)
   PUBMED   10433972
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017569.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05762.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Paractinoplanes lichenicola"
                     /db_xref="taxon:2802976"
     Protein         1..401
                     /product="VWA domain-containing protein"
                     /calculated_mol_wt=43550
     Region          158..373
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(225,227,229,284,310)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238739"
ORIGIN      
        1 msddiggdea rrerlrrwrm vlggpadeal gkaegrdgam dsalsalydq ggdgdgekss
       61 rrsaglsgsa pkvarwlgdi reyfpstvvq vmqqdaierl dltrlllepe mlsavepdvh
      121 lvgtllslnr vmpdqtkdaa rqvvrtvveq lekrieqktr aavtgalnra arinrprhad
      181 idwnrtiqan lkhyqaehrt viperligyg rrtsavqrdv vlcvdqsgsm aasvvfsgvf
      241 aavlasmksl rtslvvfdts vvdlteqlkd pvevlfgtql gggtdinrai aysqqlitrp
      301 rdsifvlisd lyeggvrdqm lrrvaemtaa gvqvvvllal sdegapaydh enaaalaalg
      361 vpafactpda fpdlmaaaie rrdlkafaer faderkaggv l
//
LOCUS       WP_236028687             110 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6518 family protein [Paractinoplanes lichenicola].
ACCESSION   WP_236028687
VERSION     WP_236028687.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes lichenicola
  ORGANISM  Paractinoplanes lichenicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040123.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20128.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Paractinoplanes lichenicola"
                     /db_xref="taxon:2802976"
     Protein         1..110
                     /product="DUF6518 family protein"
                     /calculated_mol_wt=11174
     Region          <10..106
                     /region_name="DUF6518"
                     /note="Family of unknown function (DUF6518); pfam20128"
                     /db_xref="CDD:466296"
ORIGIN      
        1 mtagrrlpgv agavfgaagv iarrpgrlrt aamgmpgavl faeaviqlrr igdpsydnag
       61 qvgsgavlig lgilitlwvg rswaqralal vialpltaig wvlltatgfr
//
LOCUS       WP_236028967             478 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-1,3-glucanase family protein [Paractinoplanes lichenicola].
ACCESSION   WP_236028967
VERSION     WP_236028967.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes lichenicola
  ORGANISM  Paractinoplanes lichenicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 478)
  AUTHORS   Wu,H.M., Liu,S.W., Hsu,M.T., Hung,C.L., Lai,C.C., Cheng,W.C.,
            Wang,H.J., Li,Y.K. and Wang,W.C.
  TITLE     Structure, mechanistic action, and essential residues of a GH-64
            enzyme, laminaripentaose-producing beta-1,3-glucanase
  JOURNAL   J Biol Chem 284 (39), 26708-26715 (2009)
   PUBMED   19640850
REFERENCE   2  (residues 1 to 478)
  AUTHORS   Palumbo,J.D., Sullivan,R.F. and Kobayashi,D.Y.
  TITLE     Molecular characterization and expression in Escherichia coli of
            three beta-1,3-glucanase genes from Lysobacter enzymogenes strain
            N4-7
  JOURNAL   J Bacteriol 185 (15), 4362-4370 (2003)
   PUBMED   12867444
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16483.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Paractinoplanes lichenicola"
                     /db_xref="taxon:2802976"
     Protein         1..478
                     /product="beta-1,3-glucanase family protein"
                     /calculated_mol_wt=50181
     Region          35..391
                     /region_name="GH64-TLP-SF"
                     /note="glycoside hydrolase family 64 (beta-1,3-glucanases
                     which produce specific pentasaccharide oligomers) and
                     thaumatin-like proteins; cl02511"
                     /db_xref="CDD:470598"
     Region          435..478
                     /region_name="ChiA1_BD"
                     /note="chitin-binding domain of Chi A1-like proteins;
                     cd12214"
                     /db_xref="CDD:213177"
ORIGIN      
        1 mrkrtawlsa vaalavaapi aavtlpasaa spailpvtvt nntgrgdavh lyvigimngr
       61 wgsvnsagaf spwpaggipp tpapdvsipg pgnggsttir ipkglsgrvy mamrdkikff
      121 itpdgfvqpa pwapgdpnfn tlfdtseftf ndaglwlnss qvdffgipha vtvtngagqt
      181 krtgdvvndg rnkvinaika qpgwersvit rsdgtvlrvl apgkatdagl fpanyldsyi
      241 nsafaaytsr tltvvprsae pnrkffgrtv gntmrftdss gaevatvdkp stsnvwgcdg
      301 vfnapnvapf iqsevrrtic talvrgtlgt saqepvldan afyknsaanh ysriihanma
      361 dgkaygfayd dvggfeslvn dgdpqragii lspfgaggnp pvttppttpp tttppttrpp
      421 ttppttqppa gttswaantp yavgqivtyn garyqcrqah tslpgweppn vlalwlpl
//
LOCUS       WP_236029007             455 aa            linear   BCT 02-MAR-2025
DEFINITION  FtsK/SpoIIIE domain-containing protein [Paractinoplanes
            lichenicola].
ACCESSION   WP_236029007
VERSION     WP_236029007.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes lichenicola
  ORGANISM  Paractinoplanes lichenicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 455)
  AUTHORS   Begg,K.J., Dewar,S.J. and Donachie,W.D.
  TITLE     A new Escherichia coli cell division gene, ftsK
  JOURNAL   J Bacteriol 177 (21), 6211-6222 (1995)
   PUBMED   7592387
REFERENCE   2  (residues 1 to 455)
  AUTHORS   Wu,L.J. and Errington,J.
  TITLE     Bacillus subtilis SpoIIIE protein required for DNA segregation
            during asymmetric cell division
  JOURNAL   Science 264 (5158), 572-575 (1994)
   PUBMED   8160014
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013727.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01580.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Paractinoplanes lichenicola"
                     /db_xref="taxon:2802976"
     Protein         1..455
                     /product="FtsK/SpoIIIE domain-containing protein"
                     /GO_function="GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=49196
     Region          <151..>340
                     /region_name="T7_EssCb_Firm"
                     /note="type VII secretion protein EssC, C-terminal domain;
                     TIGR03928"
                     /db_xref="CDD:274860"
ORIGIN      
        1 mftvlvlgiv vlgipwwshr rrrarvrvdr vihawpdlad tigldgsrvm savvdtwgwr
       61 armklkpgqs vtdvvarvpa iesalgtrpg avrveqdpth agrctmrvla vdphagaipw
      121 pgptattlad pielgvfeda ttvrvpllrr haliggttds gksgvlnvvl gnlvacpdvv
      181 lwgidlkggm elqpwapcla rlattpdeap rlladavavl earahassrd nsrvweptpn
      241 apalvivide yaeladtapd avgyaesvar rgravavdll aatqrptqka mgggalrsqm
      301 sirvclrvre rrdvdlildk gilaagwhah tldapgkfyv ladghnqprr araylvtddh
      361 vrdtavryad qrpeldplsq aaidgprral epprvtsadl esallsalde apddglaipe
      421 likatgmsrt wvydrlhala tngrarqvtr grwra
//
LOCUS       WP_236029052             500 aa            linear   BCT 02-MAR-2025
DEFINITION  aryl-sulfate sulfotransferase [Bifidobacterium miconisargentati].
ACCESSION   WP_236029052
VERSION     WP_236029052.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium miconisargentati
  ORGANISM  Bifidobacterium miconisargentati
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 500)
  AUTHORS   Baek,M.C., Kim,S.K., Kim,D.H., Kim,B.K. and Choi,E.C.
  TITLE     Cloning and sequencing of the Klebsiella K-36 astA gene, encoding
            an arylsulfate sulfotransferase
  JOURNAL   Microbiol Immunol 40 (8), 531-537 (1996)
   PUBMED   8887346
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017722.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05935.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Bifidobacterium miconisargentati"
                     /db_xref="taxon:2834437"
     Protein         1..500
                     /product="aryl-sulfate sulfotransferase"
                     /GO_function="GO:0004062 - aryl sulfotransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=55141
     Region          128..488
                     /region_name="Arylsulfotrans"
                     /note="Arylsulfotransferase (ASST); cl26042"
                     /db_xref="CDD:421257"
ORIGIN      
        1 myvyfttdka stvsytvsad gypdytatav tsdeaasair savdsyastt gdtitpsaae
       61 eteaasdvse delastthef lvlglipqvk ntitltitdt dgqtttrtit ktgpkllgae
      121 etrleqtvsp ddgtltalgn glyailgnds neqdfmyyyd angvirgevp vlyyrshrll
      181 fdsnglmwfs astktfvgmn rlgklvkiid lgdrfilhhd yaldsdgniv slatdlkred
      241 havqdqvikv dtstgkvsll vdfgemfaey kastdhsgid esdptatdrw dwihfntiql
      301 mddgsallsa retstmikvn diegtptldy migeksvwdg mdetesfltk vgdfgdtggq
      361 hsitvqydss ledgqyyiym fdnnfgyamt rpdfdwtvid gistaqsskd ensnsqfrky
      421 lvdenagtyt evqsfdvpys pyvssaeein adlnlvdtgm qgvfgvydds gdlkaqykmg
      481 lstayiyrvy qygfrgfyfa
//
LOCUS       WP_236029278             608 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6020 family protein [Bifidobacterium miconisargentati].
ACCESSION   WP_236029278
VERSION     WP_236029278.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium miconisargentati
  ORGANISM  Bifidobacterium miconisargentati
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039324.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19484.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Bifidobacterium miconisargentati"
                     /db_xref="taxon:2834437"
     Protein         1..608
                     /product="DUF6020 family protein"
                     /calculated_mol_wt=66335
     Region          <63..408
                     /region_name="DUF6020"
                     /note="Family of unknown function (DUF6020); pfam19484"
                     /db_xref="CDD:466106"
ORIGIN      
        1 mpsnvsafai iraifvwlta rrpstlisal ksrflpyflt vaicwlpwlm ltwpgsmrdd
       61 tvaqylqaag ihhyytqhpl fdtltfglfw hlgealgggs plvgqaiyts mqaallaaga
      121 alslcyirkl gasrwligls ltylatsyvv vgsvttmgkd slhtvfflpl avvfseiclt
      181 rgrvlerrpv aivfvmllfa aivskrtalv ivlcagcgll avcrkgkprf rtfaclavai
      241 llaqsvwspl aaaathsnps pgrevwglvt qpvaqvahdh pngpnaitat qrdrlnaimn
      301 ldqaaatlnp hrtnetfatl rehpqptaaq klaalrtwve lglahpadyv kayagpiraw
      361 wdpalnfayp tdsdylftpg ylrqwatflp egaanagtrn egradadvpa aeriaavdrd
      421 lapfmgtsrr pqwqrrilks vhrwvrkdnp ltamalyvtw iplaiglall vqavtwrakm
      481 ahrddggrtg grgdvrndcr nqcddrrgnp rtniaaatdh iarpaadtad svavkrtanp
      541 aanpiapala aygllfftvl slyaspealf wypipvyftl plftalpfva grmadldpap
      601 aptrearp
//
LOCUS       WP_236029334             405 aa            linear   BCT 02-MAR-2025
DEFINITION  histidine kinase [Bifidobacterium miconisargentati].
ACCESSION   WP_236029334
VERSION     WP_236029334.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium miconisargentati
  ORGANISM  Bifidobacterium miconisargentati
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 405)
  AUTHORS   Grebe,T.W. and Stock,J.B.
  TITLE     The histidine protein kinase superfamily
  JOURNAL   Adv Microb Physiol 41, 139-227 (1999)
   PUBMED   10500846
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019350.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07730.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Bifidobacterium miconisargentati"
                     /db_xref="taxon:2834437"
     Protein         1..405
                     /product="histidine kinase"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=44337
     Region          137..396
                     /region_name="ComP"
                     /note="Signal transduction histidine kinase ComP [Signal
                     transduction mechanisms]; COG4585"
                     /db_xref="CDD:443642"
ORIGIN      
        1 mrqirsavsr figrlgsdns hpviaaacvl laaaliaeym traatdasst vsvrhlalvl
       61 vtlvgliggm frpqwflwaa lvagemlmla mpmitplavi itctgflayl dtwsgaiatg
      121 mllisttfgv epssgrllva tlqnlafycf plvtglllhm mrqrdhdsyl lrrqqeredt
      181 argmhdtisn dlaylilrid haeacgmpag eqeyrqqlre lriaadsamt hthtvidsle
      241 ehveqqpqsq pseprstaal plapdadhat vqqaelqsli ddeeaklesl gftgdnllge
      301 lrrplspdmm rlltglltel yaniakhadp aewyavsisf daeelhisvs dtiaehdgkl
      361 glgsgldryr aiiekaggsf tihteqrywq ldaaipnksd nglhp
//
LOCUS       WP_236029668             268 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Paractinoplanes lichenicola].
ACCESSION   WP_236029668
VERSION     WP_236029668.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes lichenicola
  ORGANISM  Paractinoplanes lichenicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 268)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 268)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Paractinoplanes lichenicola"
                     /db_xref="taxon:2802976"
     Protein         1..268
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=28043
     Region          58..257
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(115,117,119..120,190..191,211,257)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 msihgvesis viavedaagp ffeprsrafp tatpeqwaaa daldpaartp ggewllrfrs
       61 yavrvgtgpv ilvdagigpa gslaadwapv pgrlpdalae agiapgevsa ivlthlhndh
      121 mgwavprdsp ftearvvmqq adidayaanr eqagqydllv eplraagrle aiagervlad
      181 gvrvvptpgh tpghqsvwve sggdsllitg dllvhaiqlt npelpyasdm npdeagrsri
      241 talsearrrg atvavshlge afralais
//
LOCUS       WP_236029302             326 aa            linear   BCT 02-MAR-2025
DEFINITION  replication protein RepA [Bifidobacterium miconisargentati].
ACCESSION   WP_236029302
VERSION     WP_236029302.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium miconisargentati
  ORGANISM  Bifidobacterium miconisargentati
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 326)
  AUTHORS   Basu,A., Chawla-Sarkar,M., Chakrabarti,S. and Das Gupta,S.K.
  TITLE     Origin binding activity of the Mycobacterial plasmid pAL5000
            replication protein RepB is stimulated through interactions with
            host factors and coupled expression of repA
  JOURNAL   J Bacteriol 184 (8), 2204-2214 (2002)
   PUBMED   11914352
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016670.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04796.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Bifidobacterium miconisargentati"
                     /db_xref="taxon:2834437"
     Protein         1..326
                     /product="replication protein RepA"
                     /calculated_mol_wt=36578
     Region          93..260
                     /region_name="RPA"
                     /note="Replication initiator protein A; cl19398"
                     /db_xref="CDD:473167"
ORIGIN      
        1 mvrkqtttqg eespemqpki shaalirpqt ladiemrepd skeiwyghsi ltstlfpptq
       61 paagtdfvsk tngtleyvle agidpeerkr kfpygkyprl vmawiakqir aagrhkteyv
      121 dpetrtitip siwqlcnemg lprggktadk iqeqlrllls shitirrttg faggklhdmv
      181 slpiveavrf keddanaafs gsafvltqev ynrlaresap fdtrasslll sgrsvlpydv
      241 yvwitgsmkn ldhdlpvswd wlyerfgdgi admrnfrlkf rraldkvsev ypaarftvtr
      301 kavilhpspt aiaahsksve ttaaee
//
LOCUS       WP_236029846             196 aa            linear   BCT 02-MAR-2025
DEFINITION  GIY-YIG nuclease family protein [Paractinoplanes lichenicola].
ACCESSION   WP_236029846
VERSION     WP_236029846.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes lichenicola
  ORGANISM  Paractinoplanes lichenicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF044913.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20815.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Paractinoplanes lichenicola"
                     /db_xref="taxon:2802976"
     Protein         1..196
                     /product="GIY-YIG nuclease family protein"
                     /calculated_mol_wt=21500
     Region          44..163
                     /region_name="GIY-YIG_SF"
                     /note="GIY-YIG nuclease domain superfamily; cl15257"
                     /db_xref="CDD:472790"
     Site            order(44..46,73..75)
                     /site_type="other"
                     /note="GIY-YIG motif/motif A"
                     /db_xref="CDD:198381"
     Site            order(46,73,75,83,88,150)
                     /site_type="active"
                     /db_xref="CDD:198381"
     Site            order(83,150)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:198381"
     Site            150
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:198381"
ORIGIN      
        1 mtapgerpty astpwtradk alhllsvepv gldaavkrlg rgsgvyawwa tlsvlpdlpg
       61 ppnetdpsfr llyigratsl rgrivrnhlr rsgsstlrrt lagllvsesy rttwtdrvvl
      121 tpedelrltt wmhahlrltw aedeeptsve telvarlhpp lnvhgvdpdh vqpaviaakn
      181 aynassqpei npapap
//
LOCUS       WP_236029847             494 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Paractinoplanes lichenicola].
ACCESSION   WP_236029847
VERSION     WP_236029847.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes lichenicola
  ORGANISM  Paractinoplanes lichenicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 494)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Paractinoplanes lichenicola"
                     /db_xref="taxon:2802976"
     Protein         1..494
                     /product="AMP-binding protein"
                     /calculated_mol_wt=52427
     Region          1..491
                     /region_name="PRK07788"
                     /note="acyl-CoA synthetase; Validated"
                     /db_xref="CDD:236097"
ORIGIN      
        1 marrglltpg pphrvarqfa alhkwkfgla gelrqaaars psrvalideg gpvtygelld
       61 rtarlagalp vapgdrvgil arnstamvea ligvatlgan pvlmntglss gqlaavtrdq
      121 qlrllihdpa ftppqgvpvl plgqisyaap ltkpparpgr tiiltsgttg vpkgaqrptp
      181 sgfrplcsii dripltagir mfiaaplfha wgfaglqmal alratavlrp rfepadalet
      241 laahdcaami avpvmlqrim eqparevplr iaavsgsalp gglatrfmdr ygevvynlyg
      301 steaswasia tpadlraapn tagrpphgti vealdehgrp vprgtpgrlf vgnemlfegy
      361 tngatrelhk gllatgdlgh vdeagrvfvd grqddmivsg genvfpseve dvlaarpevr
      421 evavigvade qygqrlaayv vlhdgaelta eavrdhvrae larfsvprdv vfrpelprna
      481 tgkilkrlla deqa
//
LOCUS       WP_236029873             150 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Paractinoplanes lichenicola].
ACCESSION   WP_236029873
VERSION     WP_236029873.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes lichenicola
  ORGANISM  Paractinoplanes lichenicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 150)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Paractinoplanes lichenicola"
                     /db_xref="taxon:2802976"
     Protein         1..150
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=16184
     Region          5..128
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(104..107,109)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 mnelvlvved sdedieaiar aigrshpdvr leflrsgsgv lprldgagae pprlvlldln
       61 mpgeggldvi rqvraraefd alrlvvftss enqaeadacy aagadsyiyk pinfalfqsv
      121 lsqtldywrs repnvtqtvv pppgdssaqa
//
LOCUS       WP_236029860             573 aa            linear   BCT 02-MAR-2025
DEFINITION  ThuA domain-containing protein [Paractinoplanes lichenicola].
ACCESSION   WP_236029860
VERSION     WP_236029860.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes lichenicola
  ORGANISM  Paractinoplanes lichenicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 573)
  AUTHORS   Ampomah,O.Y., Avetisyan,A., Hansen,E., Svenson,J., Huser,T.,
            Jensen,J.B. and Bhuvaneswari,T.V.
  TITLE     The thuEFGKAB operon of rhizobia and agrobacterium tumefaciens
            codes for transport of trehalose, maltitol, and isomers of sucrose
            and their assimilation through the formation of their 3-keto
            derivatives
  JOURNAL   J Bacteriol 195 (17), 3797-3807 (2013)
   PUBMED   23772075
REFERENCE   2  (residues 1 to 573)
  AUTHORS   Ampomah,O.Y., Jensen,J.B. and Bhuvaneswari,T.V.
  TITLE     Lack of trehalose catabolism in Sinorhizobium species increases
            their nodulation competitiveness on certain host genotypes
  JOURNAL   New Phytol 179 (2), 495-504 (2008)
   PUBMED   19086182
REFERENCE   3  (residues 1 to 573)
  AUTHORS   Jensen,J.B., Peters,N.K. and Bhuvaneswari,T.V.
  TITLE     Redundancy in periplasmic binding protein-dependent transport
            systems for trehalose, sucrose, and maltose in Sinorhizobium
            meliloti
  JOURNAL   J Bacteriol 184 (11), 2978-2986 (2002)
   PUBMED   12003938
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018038.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06283.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Paractinoplanes lichenicola"
                     /db_xref="taxon:2802976"
     Protein         1..573
                     /product="ThuA domain-containing protein"
                     /calculated_mol_wt=61453
     Region          31..239
                     /region_name="ThuA"
                     /note="Trehalose utilization; pfam06283"
                     /db_xref="CDD:461867"
     Region          254..431
                     /region_name="3keto-disac_hyd"
                     /note="3-keto-disaccharide hydrolase; pfam06439"
                     /db_xref="CDD:399445"
     Region          451..561
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
ORIGIN      
        1 mtwkrvaaaa ttllllapaa pahaagplte ilvfsktagf rhgsipagia airqlgtang
       61 fgvtatedag qfttenlary qavvflsttg dvldpaqqsa feayvtgggg fagvhaaadt
      121 eydwpwyedl vgayfhshpa nqtatvrved rgnastahlp qawprydewy nyrtnprdea
      181 kvlatldest ysggnmgddh pitwcktvga grawytglgh tdesygeanf lrqllggiqi
      241 asghrpadcr petgytalfd gsqasldqwr qagpggftla dgtissqggm gllwypvrtf
      301 enyslkldwm mpgddnggvf igfpdpqgdp wkpvdqghei qidatdadps rttgsvysfa
      361 apdaavrdaa lnppgswnty eigvhgqrve iwlngvkvnd ylsnraiang yigvqndgag
      421 ldinyrniri ktdgpgqppg vdlargvrgv assvepgsly laanatdgdp atrwgsaysd
      481 pqwlrldlgr sqpinrvklt weaayarsyq iqtspngrtw ttvyatttgn ggvddiplta
      541 tgrfvrvlgt qratqwgysl ydvnvfgpap aar
//
LOCUS       WP_236030045             387 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Paractinoplanes lichenicola].
ACCESSION   WP_236030045
VERSION     WP_236030045.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes lichenicola
  ORGANISM  Paractinoplanes lichenicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 387)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Paractinoplanes lichenicola"
                     /db_xref="taxon:2802976"
     Protein         1..387
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=41681
     Region          15..132
                     /region_name="REC_HupR-like"
                     /note="phosphoacceptor receiver (REC) domain of hydrogen
                     uptake protein regulator (HupR) and similar domains;
                     cd17569"
                     /db_xref="CDD:381113"
     Region          25..>253
                     /region_name="HDGYP"
                     /note="HD-GYP domain, c-di-GMP phosphodiesterase class II
                     (or its inactivated variant) [Signal transduction
                     mechanisms]; COG2206"
                     /db_xref="CDD:441808"
     Site            order(98,102,105..106,109,111..113)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381113"
ORIGIN      
        1 mtnvlapetg vatrptvllv ddetailetl slqlrrdhkv ivaesgaeal rllassgpva
       61 avisdlrmpe mdgvellrrv qleypdttrv lhtaqsdlsa aiaaindggv yrylakpvpt
      121 delrstvqsa velhgrstad rqlldktlka slqalfgclq lasplafara grirtlvsel
      181 chemqldalw eievaamaaq lgavtlpptv lakldkglpc tdeeqamvng mpgvavqllk
      241 sipmledviq ivrglglnpp phpsplveta vdvirtaidf etlesrglev esaitvlecr
      301 dhsalhvlaa lrkvkgcvqv kekvrglrvv dletgmrvae divatnglvl igrgmvvtel
      361 lldrlnnfar mieiiepvla vpgarrf
//
LOCUS       WP_236030058             423 aa            linear   BCT 02-MAR-2025
DEFINITION  alginate lyase family protein [Paractinoplanes lichenicola].
ACCESSION   WP_236030058
VERSION     WP_236030058.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes lichenicola
  ORGANISM  Paractinoplanes lichenicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 423)
  AUTHORS   Yoon,H.J., Mikami,B., Hashimoto,W. and Murata,K.
  TITLE     Crystal structure of alginate lyase A1-III from Sphingomonas
            species A1 at 1.78 A resolution
  JOURNAL   J Mol Biol 290 (2), 505-514 (1999)
   PUBMED   10390348
REFERENCE   2  (residues 1 to 423)
  AUTHORS   Ertesvag,H., Erlien,F., Skjak-Braek,G., Rehm,B.H. and Valla,S.
  TITLE     Biochemical properties and substrate specificities of a
            recombinantly produced Azotobacter vinelandii alginate lyase
  JOURNAL   J Bacteriol 180 (15), 3779-3784 (1998)
   PUBMED   9683471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017263.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05426.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Paractinoplanes lichenicola"
                     /db_xref="taxon:2802976"
     Protein         1..423
                     /product="alginate lyase family protein"
                     /GO_component="GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /GO_function="GO:0016829 - lyase activity [Evidence IEA]"
                     /calculated_mol_wt=45316
     Region          <134..341
                     /region_name="AlgLyase"
                     /note="Alginate Lyase A1-III; enzymatically depolymerizes
                     alginate, a complex copolymer of beta-D-mannuronate and
                     alpha-L-guluronate, by cleaving the beta-(1,4) glycosidic
                     bond; cl00179"
                     /db_xref="CDD:444729"
ORIGIN      
        1 mrkrvllatf talvaavatf gvrltadaae trtagetrta aetgaagkta ttgeakaage
       61 ikaatfthpg vmisraqldf vkgkvtagaq pwasaytqml nsryaslsrt papratvecg
      121 sysnpnngct deredaiaay tdaliwyigg nsayaqksia lmdawsatik ahtnsnaplq
      181 tgwagsvwpr aaeiirytys swpnqarfat mlrnvylptv iagsssngnw elsmmeaavg
      241 isvfledras ydraitrfka rtaayvyvta dgsqpkyppv gsvdtraeli sywqgqstfv
      301 dglsqetcrd fvhtgyglsa ishvaettri qgedlwpevs ermrhalgfh tkfengtavp
      361 anicggsvvk glgpvsevay nalanrlgia msnsktytes rrpqgtnnlf vawetlthan
      421 npa
//
LOCUS       WP_236030299             436 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Paractinoplanes lichenicola].
ACCESSION   WP_236030299
VERSION     WP_236030299.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes lichenicola
  ORGANISM  Paractinoplanes lichenicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 436)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 436)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Paractinoplanes lichenicola"
                     /db_xref="taxon:2802976"
     Protein         1..436
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=45240
     Region          13..429
                     /region_name="PRK15481"
                     /note="transcriptional regulatory protein PtsJ;
                     Provisional"
                     /db_xref="CDD:185378"
ORIGIN      
        1 mrldevsarg ladavgraig egvllpgskl ppvravalel rmspttvsaa wqllrragti
       61 qtdgrrgtiv aasradgpgr yraalrgrsg faldlstgvp dprllpslpa laglspapts
      121 yldepvlpal asllrerwpy vcqrlaifdg amdaidhvas sllrlgdrvv venpcfppll
      181 dlleslgvqa vaadtdaqgm lpaalsaalt qrpaavflqp ralnptgasw sstraaelat
      241 vlsraphvyv veddsagdvs saalhslgsh lprqtihvhs fskshgpdlr laavsapaav
      301 ldpilerrll gqgwtsrllq hllltlltdp asvtavaaar teyarrrhlv vaalathgit
      361 vppgdglnlw lpvadeaaal islasnglaa aagtaftlgp gtphlrvtvg liatdheava
      421 tllaeaarap alsitr
//
LOCUS       WP_236030152            1406 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-(1->3)-arabinofuranosyltransferase domain-containing protein
            [Paractinoplanes lichenicola].
ACCESSION   WP_236030152
VERSION     WP_236030152.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes lichenicola
  ORGANISM  Paractinoplanes lichenicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 1406)
  AUTHORS   Tan,Y.Z., Zhang,L., Rodrigues,J., Zheng,R.B., Giacometti,S.I.,
            Rosario,A.L., Kloss,B., Dandey,V.P., Wei,H., Brunton,R.,
            Raczkowski,A.M., Athayde,D., Catalao,M.J., Pimentel,M.,
            Clarke,O.B., Lowary,T.L., Archer,M., Niederweis,M., Potter,C.S.,
            Carragher,B. and Mancia,F.
  TITLE     Cryo-EM Structures and Regulation of Arabinofuranosyltransferase
            AftD from Mycobacteria
  JOURNAL   Mol Cell 78 (4), 683-699 (2020)
   PUBMED   32386575
REFERENCE   2  (residues 1 to 1406)
  AUTHORS   Skovierova,H., Larrouy-Maumus,G., Zhang,J., Kaur,D., Barilone,N.,
            Kordulakova,J., Gilleron,M., Guadagnini,S., Belanova,M.,
            Prevost,M.C., Gicquel,B., Puzo,G., Chatterjee,D., Brennan,P.J.,
            Nigou,J. and Jackson,M.
  TITLE     AftD, a novel essential arabinofuranosyltransferase from
            mycobacteria
  JOURNAL   Glycobiology 19 (11), 1235-1247 (2009)
   PUBMED   19654261
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023275.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11847.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1406
                     /organism="Paractinoplanes lichenicola"
                     /db_xref="taxon:2802976"
     Protein         1..1406
                     /product="alpha-(1->3)-arabinofuranosyltransferase
                     domain-containing protein"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=147382
     Region          29..673
                     /region_name="DUF3367"
                     /note="Alpha-(1->3)-arabinofuranosyltransferase;
                     pfam11847"
                     /db_xref="CDD:432125"
     Region          718..>776
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
     Region          946..>1010
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
ORIGIN      
        1 mqpalkssad dgvprsvwrl rllavcaglt aiaflqspgs taidtkvdlv idpggwlsra
       61 lhvwdpagtf gqlqnqaygy lwpmgpffll gkllavpawv vqrlwwalll slaftglvll
      121 aqrlgigtpw ariiagvafa lspriltelg pisveawpta lapwvlipli glrqgvpirr
      181 avtrsalvva caggvnatav lavvplavlw laglrparlr fraligwgva vaaatawwlv
      241 pllllgrysp pfldyietaa vttaptdttt vlrgashwha yltgafgplw pagwrlates
      301 aivvatliva glglaglsrr gvphrwflvt gllaglalvg lghvgaidgl fadaqrafld
      361 gpgaplrnvh kfdvvlrlpl vlglahllgl alrsarttre pdrkparlra aavtgaalaa
      421 iagvaspala ggvvppgsfa evpgywreaa twldrnldne qvlvvpgarf pqylwgrpsd
      481 eitqalmkgn wgvrnsiplt ppgtirllds veealatgsg siglatllsr sgvrylllrs
      541 dlnygraqat epivarqall rspgltpvat fgpevggdrl pgffvddgld vkvpalevwq
      601 vdrpakaita ydasslttvv ggpesllgaa aagklpagpt vlagdrpddl spgpvvltdg
      661 mrrrevafgm aadrasatle agdegrlgap ardylpdwgd eqdtvvrylg iktvrastay
      721 seanaligar pahqpfaald gnpgtswrsa pgvpsagqwl evelpdkrvi sslgltldqg
      781 tdsvptritv ragpnepvtr evfgttftip lpgdipadtv rvtvdavrdv rlgyggvgit
      841 dlsipgvvaq rtlavppspv agraagmlft aapstpacyf adgrpycsgg karesedggy
      901 idrtaevpqa alysvtvrar pkpgaalnam ldpggtasvt sgivpsvtas sngvpdpvar
      961 pgvvadgdpg ttwyasdedk npwlrlgflk prqvngiriq ladgvaasri wqvtvlgdtg
     1021 vrngyldegg slrfdpplrt gaitvlfsna fpsrsldpyr dttrelplgv seltvlddpp
     1081 parndpdrrl ylrcgtgpai svggvqrsta lvasrrelve grevatrlcg pggtgpvrva
     1141 agqtrvvava sstadpvrvn ltplrgpeag qgggevette sgespvrvde wtsttrrvhl
     1201 daspaqrvlt lrentnpgwt atlagetlrp livdgwqqgw ivpsgpagev tlrfapdqtf
     1261 gialgagavl ltgvavaavi psrqpvpaav pvrrrrrwll pplvggaall lvggvtaagl
     1321 tamglavvva lralrphlds rdrqwlrgal nwarfllpag lfaiagwasv tgadshtaal
     1381 pqlaavaagv alwlsllfpg grrrrr
//
LOCUS       WP_236030514             242 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar phosphate nucleotidyltransferase [Paractinoplanes
            lichenicola].
ACCESSION   WP_236030514
VERSION     WP_236030514.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes lichenicola
  ORGANISM  Paractinoplanes lichenicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 242)
  AUTHORS   Jensen,S.O. and Reeves,P.R.
  TITLE     Domain organisation in phosphomannose isomerases (types I and II)
  JOURNAL   Biochim Biophys Acta 1382 (1), 5-7 (1998)
   PUBMED   9507048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012695.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00483.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Paractinoplanes lichenicola"
                     /db_xref="taxon:2802976"
     Protein         1..242
                     /product="sugar phosphate nucleotidyltransferase"
                     /GO_function="GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=26709
     Region          3..223
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
     Site            order(6,8,53,105,107)
                     /site_type="active"
                     /db_xref="CDD:133048"
ORIGIN      
        1 mhavilaggk gvrlrpyttt lpkplmpigd khaileivld qlagcgftsv tlainhlgpl
       61 ikafvgdgar wglrvdyiee drplstvgpl fglkdtlpeh flvmngdvlt dldyadllnq
      121 halsgagltv aiaerthkve fgvldveqsr iigfrekpsl ryqvsmgvyg msrrtlapyp
      181 agrsfgfdel vldllarrdh patypftgfw ldigrpedyd eanrsfeelr pkllrdrage
      241 pv
//
LOCUS       WP_236030611             228 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4097 family beta strand repeat-containing protein
            [Paractinoplanes lichenicola].
ACCESSION   WP_236030611
VERSION     WP_236030611.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes lichenicola
  ORGANISM  Paractinoplanes lichenicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024743.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13349.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Paractinoplanes lichenicola"
                     /db_xref="taxon:2802976"
     Protein         1..228
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /calculated_mol_wt=23079
     Region          23..224
                     /region_name="YvlB"
                     /note="Uncharacterized conserved protein YvlB, contains
                     DUF4097 and DUF4098 domains [Function unknown]; COG3595"
                     /db_xref="CDD:442814"
ORIGIN      
        1 mgnesiqkfd spsavsatvd vpagriqfia geradttvei rpsdagkksd vkaadgievt
       61 fadgalrvea aeptnrllgs sgsvevtvll ptdskidaks aladfrgvgr lgdvtieaaq
      121 gsikldetat ahltlqsgdi svgrlggsae istqqgnlqi seavtgtvel nttrgditvg
      181 aapgssatld agttygrvrn slkntdgaat alnirattah gditaesr
//
LOCUS       WP_236030818             241 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6461 domain-containing protein [Paractinoplanes lichenicola].
ACCESSION   WP_236030818
VERSION     WP_236030818.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes lichenicola
  ORGANISM  Paractinoplanes lichenicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039462.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20062.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Paractinoplanes lichenicola"
                     /db_xref="taxon:2802976"
     Protein         1..241
                     /product="DUF6461 domain-containing protein"
                     /calculated_mol_wt=25229
     Region          51..238
                     /region_name="DUF6461"
                     /note="Family of unknown function (DUF6461); pfam20062"
                     /db_xref="CDD:437894"
ORIGIN      
        1 mlsfvaaglv agcgsrggtp savasgspvg srgpslspse vaaareagaa dyawfgrvae
       61 lrkgfcfvwv kdvrpaqvlk rmgakeleri gwrqmvgagd gqrgaiekyy fgvsrlddew
      121 slviedngsl gradellrpl segttlvcly raadgsgrfl lledgavqld fdpqapnrrs
      181 garvdalaqe isavgigagg datagafala eratgvglsl emlqertylf sevptgqrks
      241 q
//
LOCUS       WP_236030907             287 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Ktedonospora
            formicarum].
ACCESSION   WP_236030907
VERSION     WP_236030907.1
KEYWORDS    RefSeq.
SOURCE      Ktedonospora formicarum
  ORGANISM  Ktedonospora formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonospora.
REFERENCE   1  (residues 1 to 287)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 287)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 287)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 287)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Ktedonospora formicarum"
                     /db_xref="taxon:2778364"
     Protein         1..287
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=32049
     Region          1..287
                     /region_name="PhnK"
                     /note="ABC-type phosphonate transport system, ATPase
                     component PhnK [Inorganic ion transport and metabolism];
                     COG4107"
                     /db_xref="CDD:443283"
ORIGIN      
        1 myteerpwvl kaehlhkryg pgcaycealt gadttnrcpv cgsvtgcvdv sftleqgevl
       61 givgesgsgk stlmqivnls lpaeqgqlwy reldeqqtsq hepvnlltld kyarrqfrne
      121 qlgivyqrpe lglnmnftvg gnvaekllla nwrhvgnirs rtselmrlte lpperideep
      181 rkfsggmlqr vqiakalssn ptvllldevt sgldlsvqak vldlikrlrw elqmtmllvs
      241 hdlgvikqla nrtivmkngr ivesgltdqi ledpqhpytq llvssal
//
LOCUS       WP_236030918             612 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Ktedonospora
            formicarum].
ACCESSION   WP_236030918
VERSION     WP_236030918.1
KEYWORDS    RefSeq.
SOURCE      Ktedonospora formicarum
  ORGANISM  Ktedonospora formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Ktedonospora formicarum"
                     /db_xref="taxon:2778364"
     Protein         1..612
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=70644
     Region          170..508
                     /region_name="TPR_MalT"
                     /note="MalT-like TPR region; pfam17874"
                     /db_xref="CDD:436107"
     Region          <551..612
                     /region_name="CitB"
                     /note="DNA-binding response regulator, NarL/FixJ family,
                     contains REC and HTH domains [Signal transduction
                     mechanisms, Transcription]; COG2197"
                     /db_xref="CDD:441799"
ORIGIN      
        1 mekveqanlf lspldeqrqw yayhplfaea lrarleqtap aeipllhlra sqwyaaqqmh
       61 seaiqhalqa hewpwaawll eqirskcirs rfqdevqlfw meqlprevvr erprlclaka
      121 hslfwvappd vteswvndar rawirthqre eqslltrdvy epeaplhllg eiatlqakia
      181 glyygdagat rafcqealth leekqwaarv yvtihqaran atqgyleral qqvlanlsri
      241 kaegdrefes iylfettvlm tiagklrqaw qyseetihtl qtrkghqsvh lcwpyafqak
      301 ilhewnrlee aqhlaeqaiq mgeqteilaf lplaytlllr ivlsqgklee agrasqqley
      361 awrmmpspyr ialwscvdqm rfwlacgdle qarrwvsdlq wkeplvspla rerqsvafar
      421 lllaesqpep alnlltllmk ratatqrwyh vvemlllqvq ayqmreqhqd amsllsqsvr
      481 lgapegyirc fvdeghliad llyqlwqqns emenlpylet llaafnqqpi pqptdrkkel
      541 slspqalldp ltareqevlr llargasnka iadtlivvpg tvkhhishll skleatnrtq
      601 avarardlgl ls
//
LOCUS       WP_236030919             249 aa            linear   BCT 02-MAR-2025
DEFINITION  TetR/AcrR family transcriptional regulator C-terminal
            domain-containing protein [Paractinoplanes lichenicola].
ACCESSION   WP_236030919
VERSION     WP_236030919.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes lichenicola
  ORGANISM  Paractinoplanes lichenicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 249)
  AUTHORS   Hinrichs,W., Kisker,C., Duvel,M., Muller,A., Tovar,K., Hillen,W.
            and Saenger,W.
  TITLE     Structure of the Tet repressor-tetracycline complex and regulation
            of antibiotic resistance
  JOURNAL   Science 264 (5157), 418-420 (1994)
   PUBMED   8153629
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014906.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02909.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Paractinoplanes lichenicola"
                     /db_xref="taxon:2802976"
     Protein         1..249
                     /product="TetR/AcrR family transcriptional regulator
                     C-terminal domain-containing protein"
                     /GO_process="GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /calculated_mol_wt=26599
     Region          32..76
                     /region_name="TetR_N"
                     /note="Bacterial regulatory proteins, tetR family;
                     pfam00440"
                     /db_xref="CDD:425684"
     Region          90..238
                     /region_name="TetR_C_33"
                     /note="Tetracyclin repressor-like, C-terminal domain;
                     cl38988"
                     /db_xref="CDD:476841"
ORIGIN      
        1 mdtpygsaps pvwerpepqp raapvplsra kiaatavhla dsqgldglsi rkiakelgvg
       61 pmrlydyvtn rselldlmvd avyaeiaeaa pqsewraavl avvhrtraaa ldhewfadll
      121 garphlgpha lavgestaaa lsqapglhdv dalqralgvl naflvgalra eiterqvara
      181 tgtdesewqs algpyltrml etgryptvsr lvhdgahlda aetfhhnltt ildgitttsp
      241 renpnlppg
//
LOCUS       WP_236031010             164 aa            linear   BCT 02-MAR-2025
DEFINITION  universal stress protein [Ktedonospora formicarum].
ACCESSION   WP_236031010
VERSION     WP_236031010.1
KEYWORDS    RefSeq.
SOURCE      Ktedonospora formicarum
  ORGANISM  Ktedonospora formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonospora.
REFERENCE   1  (residues 1 to 164)
  AUTHORS   Sousa,M.C. and McKay,D.B.
  TITLE     Structure of the universal stress protein of Haemophilus influenzae
  JOURNAL   Structure 9 (12), 1135-1141 (2001)
   PUBMED   11738040
REFERENCE   2  (residues 1 to 164)
  AUTHORS   Zarembinski,T.I., Hung,L.W., Mueller-Dieckmann,H.J., Kim,K.K.,
            Yokota,H., Kim,R. and Kim,S.H.
  TITLE     Structure-based assignment of the biochemical function of a
            hypothetical protein: a test case of structural genomics
  JOURNAL   Proc Natl Acad Sci U S A 95 (26), 15189-15193 (1998)
   PUBMED   9860944
REFERENCE   3  (residues 1 to 164)
  AUTHORS   Nystrom,T. and Neidhardt,F.C.
  TITLE     Expression and role of the universal stress protein, UspA, of
            Escherichia coli during growth arrest
  JOURNAL   Mol Microbiol 11 (3), 537-544 (1994)
   PUBMED   8152377
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012791.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00582.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Ktedonospora formicarum"
                     /db_xref="taxon:2778364"
     Protein         1..164
                     /product="universal stress protein"
                     /calculated_mol_wt=18266
     Region          16..155
                     /region_name="AANH_superfamily"
                     /note="Adenine nucleotide alpha hydrolase (AANH)
                     superfamily; cl00292"
                     /db_xref="CDD:469708"
ORIGIN      
        1 mtahainetw ttsecvlvgf dhraqsrsii rdawrlahgl hanliavsie legyaavrrr
       61 llgflkygvg mkahfldaqr rleehallae dlgaevvrlk stdiasalvq vahekhatql
      121 vigqpthtrl eeflsgsvvn rllrlranad ihvvplsreq ered
//
LOCUS       WP_236031037             452 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent monooxygenase [Paractinoplanes lichenicola].
ACCESSION   WP_236031037
VERSION     WP_236031037.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes lichenicola
  ORGANISM  Paractinoplanes lichenicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 452)
  AUTHORS   Schreuder,H.A., van der Laan,J.M., Swarte,M.B., Kalk,K.H., Hol,W.G.
            and Drenth,J.
  TITLE     Crystal structure of the reduced form of p-hydroxybenzoate
            hydroxylase refined at 2.3 A resolution
  JOURNAL   Proteins 14 (2), 178-190 (1992)
   PUBMED   1409567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01494.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Paractinoplanes lichenicola"
                     /db_xref="taxon:2802976"
     Protein         1..452
                     /product="FAD-dependent monooxygenase"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /calculated_mol_wt=49273
     Region          1..>400
                     /region_name="PRK08255"
                     /note="bifunctional salicylyl-CoA
                     5-hydroxylase/oxidoreductase"
                     /db_xref="CDD:236203"
     Region          117..>164
                     /region_name="KLF3_N"
                     /note="N-terminal domain of Kruppel-like factor 3;
                     cd21577"
                     /db_xref="CDD:410554"
ORIGIN      
        1 mritcagggp aglyfavlak ladpscevtv lernppgvty gwgvvfwddl lddlfaydpv
       61 saqriwdaac qwdeyevrat gkevthlagy gfslgrhkll ailaeravel gvdvqysspa
      121 tpfsttshpt fsshptfssh paspshpasp shpaspshpa psltpssdis vfsdsdlvva
      181 cdgagsllrs adathfgtev atgtnkyiwl gtpkvfrtft fgfekthagw iwyhaypfdd
      241 etstfivect pavwsaleld tldaaagcar letifashlg gqrlidhrad tggtgwmnfr
      301 rvtnqrwdng nvvlmgdaah tthfaigsgt klamqdamal adslaaggpl apaleryehr
      361 rraalaplqr aalassvwfe rmpeyadlps irfsyalsdr rgeyplwryl lhlstqravp
      421 ramlrsalna rrrsrarrrp daepripqlt gg
//
LOCUS       WP_236031062             184 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5679 domain-containing protein [Ktedonospora formicarum].
ACCESSION   WP_236031062
VERSION     WP_236031062.1
KEYWORDS    RefSeq.
SOURCE      Ktedonospora formicarum
  ORGANISM  Ktedonospora formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039193.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18930.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Ktedonospora formicarum"
                     /db_xref="taxon:2778364"
     Protein         1..184
                     /product="DUF5679 domain-containing protein"
                     /calculated_mol_wt=20335
     Region          142..181
                     /region_name="DUF5679"
                     /note="Domain of unknown function (DUF5679); pfam18930"
                     /db_xref="CDD:408700"
ORIGIN      
        1 mrqaqitlrk slgwvlavvv ivlcvlfglf qkarmrrsrn esdevitlpp rvnevvspqe
       61 ypgihslets dekptitkea plesvedift rtpvttlpka pleqvqvpvi qetseersev
      121 kgdasnaptq adkveailev aycvkcrqkq tmlspersvt kngraalvgr cavcdtklfr
      181 fvsa
//
LOCUS       WP_236031117             624 aa            linear   BCT 02-MAR-2025
DEFINITION  cyclic nucleotide-binding domain-containing protein [Ktedonospora
            formicarum].
ACCESSION   WP_236031117
VERSION     WP_236031117.1
KEYWORDS    RefSeq.
SOURCE      Ktedonospora formicarum
  ORGANISM  Ktedonospora formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonospora.
REFERENCE   1  (residues 1 to 624)
  AUTHORS   Yau,K.W.
  TITLE     Cyclic nucleotide-gated channels: an expanding new family of ion
            channels
  JOURNAL   Proc Natl Acad Sci U S A 91 (9), 3481-3483 (1994)
   PUBMED   7513422
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012257.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00027.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Ktedonospora formicarum"
                     /db_xref="taxon:2778364"
     Protein         1..624
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /calculated_mol_wt=69447
     Region          15..76
                     /region_name="Fer4_10"
                     /note="4Fe-4S dicluster domain; pfam13237"
                     /db_xref="CDD:404174"
     Region          152..234
                     /region_name="cNMP_binding"
                     /note="Cyclic nucleotide-binding domain; pfam00027"
                     /db_xref="CDD:459637"
     Region          261..381
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(339..340,347..349)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(369..371,375..377)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          426..613
                     /region_name="DMSOR_beta_like"
                     /note="uncharacterized subfamily of DMSO Reductase beta
                     subunit family; cd16367"
                     /db_xref="CDD:319889"
     Site            order(439,446..449,451..452,456,460,463,465,478,481..484,
                     489,493..494,497,505,514..517,521..523,525..526,583,
                     585..589,597,601,607)
                     /site_type="other"
                     /note="Fe-S cluster binding site [ion binding]"
                     /db_xref="CDD:319889"
     Region          511..>605
                     /region_name="DMSOR_beta-like"
                     /note="Beta subunit of the DMSO Reductase (DMSOR) family;
                     cl25360"
                     /db_xref="CDD:355383"
ORIGIN      
        1 mqvkgarrel tadeirfeid mcvgcdrcmr acpvplstkv tiaelnqati tenisplier
       61 ftdecvmcgs cvpvcpvdnh rdllmhslkq rlgtswecqa diervrsilp ggwtvaqllg
      121 rlreqpmlcd ealvpdnyll hlvntsqlli skpghwlmhe gefsrdlili lsgrvelsst
      181 gpgetglpia vlrrgeylge hemlngqprq vsactaskca lllvpeqvvq rlmdiipeik
      241 nffetlhmer sietalnhip llegiaaidl rylaeqamtr vyergehlfr edeqnqpere
      301 tlhllldgfv kvarrisark gkgeriiayr qsgdyfaggl dtlgdqravs vsaitrttva
      361 eiprrnllnl frryplvkar fqeqlqlyqd ariaaqsaif epfefeqepe hpnivtdaaa
      421 raglhalvdd gviegtevlv idlakciqcn eceiacerrh ghsrmnrkgl vvgnisiata
      481 crqcqdpvcl lcsragiarl psgevyites cigcgicaer cpydnisivd lepqeqaqan
      541 lwhsfssffs gkkrkllpvl aapgpldtss aldpveemrk kiaikcdlca gyndqacvqs
      601 cptgaairvn prtffgstee ilfk
//
LOCUS       WP_236031185             460 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Ktedonospora formicarum].
ACCESSION   WP_236031185
VERSION     WP_236031185.1
KEYWORDS    RefSeq.
SOURCE      Ktedonospora formicarum
  ORGANISM  Ktedonospora formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024917.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13527.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Ktedonospora formicarum"
                     /db_xref="taxon:2778364"
     Protein         1..460
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /calculated_mol_wt=52412
     Region          21..>353
                     /region_name="Eis"
                     /note="Predicted acetyltransferase [General function
                     prediction only]; COG4552"
                     /db_xref="CDD:443616"
ORIGIN      
        1 mqmdarsgls hpfrkqlgdg lvlrwstped teglahlvgm afrhkadqpl nkslaefvrs
       61 lmtgrcpftt pydyglvedt srkghpivac aslwrhdwey egirfpigrp emvasdpqyr
      121 hqglirelfa mlhaqseseg rivqgvtgip yfyrqfgyey aldlggsqtv klahipplka
      181 geqerctlrr atvedipfiq kcytqrqges ivwnalpdaf wrfnieewei epapgrprnv
      241 hndvqiivdp qgcslgyvft aarrweelfr vwamdlvagv narelmpsll ralktlgeqa
      301 ivedsenepm qsiklylggt hplydafskq lapvsekpya wyvrvsdlpa fmrliapale
      361 rrladsilag yrgevklnff rdglrlvfqd gkltqaepwr apiyepnesa sfaplvflql
      421 lfgrrsleel ehvfpetrvs pdteivlhtl fptrpsfvyg
//
LOCUS       WP_236031312             308 aa            linear   BCT 02-MAR-2025
DEFINITION  S41 family peptidase [Ktedonospora formicarum].
ACCESSION   WP_236031312
VERSION     WP_236031312.1
KEYWORDS    RefSeq.
SOURCE      Ktedonospora formicarum
  ORGANISM  Ktedonospora formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015531.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03572.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Ktedonospora formicarum"
                     /db_xref="taxon:2778364"
     Protein         1..308
                     /product="S41 family peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=34763
     Region          <3..73
                     /region_name="cpPDZ_Deg_HtrA-like"
                     /note="permuted PDZ domain of Deg/high-temperature
                     requirement factor A (HtrA) family of housekeeping serine
                     proteases and related domains; cl49614"
                     /db_xref="CDD:483954"
     Region          <78..279
                     /region_name="Peptidase_S41_TRI"
                     /note="Tricorn protease; serine protease family S41;
                     cd07562"
                     /db_xref="CDD:143478"
     Site            order(139..140,187..188,213,215..216,218,233)
                     /site_type="active"
                     /note="Peptide binding site [active]"
                     /db_xref="CDD:143478"
ORIGIN      
        1 mikgdpanrr etspltlpgl dvaagdavla ingqrlsler tpqellvnqa rqevqltied
       61 aetqetrnvt vkalgsewpa ryrewveenr rkvhelsdgk vgyihipdmg thgfsefhrg
      121 flaeydypal lvdvrwnggg nvsglllekl arrrvgydfs rwgqpepypq esprgpmval
      181 tneqagsdgd ifshsfklmg lgpllgkrtw ggvigihprh rlvdntvttq pefsfwfkdv
      241 gwnvenygtd pdievdiapq dyvrhedpql eravkealrl vkevetlepe pgerprlsrl
      301 lrseenlk
//
LOCUS       WP_236031350             308 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Paractinoplanes
            lichenicola].
ACCESSION   WP_236031350
VERSION     WP_236031350.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes lichenicola
  ORGANISM  Paractinoplanes lichenicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 308)
  AUTHORS   Coquille,S., Roux,C., Fitzpatrick,T.B. and Thore,S.
  TITLE     The last piece in the vitamin B1 biosynthesis puzzle: structural
            and functional insight into yeast
            4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate (HMP-P)
            synthase
  JOURNAL   J Biol Chem 287 (50), 42333-42343 (2012)
   PUBMED   23048037
REFERENCE   2  (residues 1 to 308)
  AUTHORS   Wightman,R. and Meacock,P.A.
  TITLE     The THI5 gene family of Saccharomyces cerevisiae: distribution of
            homologues among the hemiascomycetes and functional redundancy in
            the aerobic biosynthesis of thiamin from pyridoxine
  JOURNAL   Microbiology (Reading) 149 (Pt 6), 1447-1460 (2003)
   PUBMED   12777485
REFERENCE   3  (residues 1 to 308)
  AUTHORS   Rodriguez-Navarro,S., Llorente,B., Rodriguez-Manzaneque,M.T.,
            Ramne,A., Uber,G., Marchesan,D., Dujon,B., Herrero,E.,
            Sunnerhagen,P. and Perez-Ortin,J.E.
  TITLE     Functional analysis of yeast gene families involved in metabolism
            of vitamins B1 and B6
  JOURNAL   Yeast 19 (14), 1261-1276 (2002)
   PUBMED   12271461
REFERENCE   4  (residues 1 to 308)
  AUTHORS   Maundrell,K.
  TITLE     nmt1 of fission yeast. A highly transcribed gene completely
            repressed by thiamine
  JOURNAL   J Biol Chem 265 (19), 10857-10864 (1990)
   PUBMED   2358444
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020650.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09084.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Paractinoplanes lichenicola"
                     /db_xref="taxon:2802976"
     Protein         1..308
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=31982
     Region          22..240
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mftatacgss ggssggtdsd gvdqvkvgvi pivdvapiyl gkekgffknr kievsmeagq
       61 ggaaivpgvv sgqfqfgfsn mtslliaqtk nvpiktvaag vastgeqgkd fgavmvkads
      121 piktaadlag kkisvntlkn igdttvresv rkaggdpkni nfvempfpna paalqegqvd
      181 aswvvepqls evkaaggrlv asnfvdaapn ltvaayftsa klagedadlv krfteaines
      241 mtyadahpde vrtilgtytk idektrgelm lpkwptqinq asvetlaklg tddgifdgat
      301 pdvakilp
//
LOCUS       WP_236031435             310 aa            linear   BCT 02-MAR-2025
DEFINITION  TIM barrel protein [Ktedonospora formicarum].
ACCESSION   WP_236031435
VERSION     WP_236031435.1
KEYWORDS    RefSeq.
SOURCE      Ktedonospora formicarum
  ORGANISM  Ktedonospora formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonospora.
REFERENCE   1  (residues 1 to 310)
  AUTHORS   Fry,J., Wood,M. and Poole,P.S.
  TITLE     Investigation of myo-inositol catabolism in Rhizobium leguminosarum
            bv. viciae and its effect on nodulation competitiveness
  JOURNAL   Mol Plant Microbe Interact 14 (8), 1016-1025 (2001)
   PUBMED   11497462
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013429.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01261.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Ktedonospora formicarum"
                     /db_xref="taxon:2778364"
     Protein         1..310
                     /product="TIM barrel protein"
                     /calculated_mol_wt=34038
     Region          3..308
                     /region_name="VpdB_C"
                     /note="C-terminal fragment of effector protein VpdB;
                     cl30226"
                     /db_xref="CDD:421976"
ORIGIN      
        1 mnnirianap cswgalefdg lpgetigytq mlnelratgy agtelgdwgy mptdavqlkt
       61 elqqrglsml gafvpvglkd ennhatgeae alrvarllta vaksteqlpy liladangtv
      121 pertlnagri tdsmelsate wstfargaer iarrvheetg lqtafhhhca gfvetpqeie
      181 rlldltdpsl lglvfdtghy lygtgeldgq hvleglehfk erilhvhfkd fhpstalqar
      241 aegwdyftav rkgifcelgk gsvpfpsvkd wlgkrgydgw ivveqdvlpg mgspaesaqr
      301 nrtyleaigl
//
LOCUS       WP_236031461             729 aa            linear   BCT 02-MAR-2025
DEFINITION  RICIN domain-containing protein [Paractinoplanes lichenicola].
ACCESSION   WP_236031461
VERSION     WP_236031461.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes lichenicola
  ORGANISM  Paractinoplanes lichenicola
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025563.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14200.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Paractinoplanes lichenicola"
                     /db_xref="taxon:2802976"
     Protein         1..729
                     /product="RICIN domain-containing protein"
                     /calculated_mol_wt=75576
     Region          <452..606
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          594..724
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cd00161"
                     /db_xref="CDD:467293"
     Site            order(607..609,620,622,629..630)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(654..655,667,669,676)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(699..701,712,714,721..722)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
ORIGIN      
        1 mpahrppvlr ghrravsrrp hrlvpvalgl allgiggvvg psvvdnvags ngsrnfalta
       61 lpadrpdrgl vyeglkpaka gslcagsyel dkqtcthgpd eapaglkvrt avtpvtakap
      121 epkdpvresa aatptdaeia rdeggsalta dapalvpdaa pgdadfimga hdvacegdgr
      181 sgkrvqvlyl heygtpsryg efvgsirnws agvdqiydes aaetggsrhv rfvttpqcrv
      241 dvsevqlptg alasfagnia aldklgynrt drkylifada tvycgiatyv adrrpglgnr
      301 nnggpsygrv dsgcwssama ahelthtlga tlidspnssg aggcldeydl lcgpdrsgkq
      361 vrtvcpkkne mrldcgkddy fntnpkpgsy ldenwniars efllrsdggd dipdaigapq
      421 pvetpsvtps apaptptaqp tptatepgea dgggdappsp tatpsesvpa teptdpvetp
      481 ggdagvpsvp vaattappte pangvqsepv qavvevrdat sgsvrlnwsa asaratyqvw
      541 vdnqpvattk atrarliglk pgaryqvtvk sgpkytarat aetapaarpa enswftltna
      601 ltggaanlya artttgtpit msaadddaqq qwqlvpagnk tyslvsrasg kcvgplggev
      661 vagaplvqtd cdnsaakwsl qaspygftlr ttdgglaagv gdqrygahrv lvlqagndqr
      721 yqswtavpd
//
LOCUS       WP_236031507             172 aa            linear   BCT 02-MAR-2025
DEFINITION  LLM class flavin-dependent oxidoreductase [Ktedonospora
            formicarum].
ACCESSION   WP_236031507
VERSION     WP_236031507.1
KEYWORDS    RefSeq.
SOURCE      Ktedonospora formicarum
  ORGANISM  Ktedonospora formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012517.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00296.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Ktedonospora formicarum"
                     /db_xref="taxon:2778364"
     Protein         1..172
                     /product="LLM class flavin-dependent oxidoreductase"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /calculated_mol_wt=18472
     Region          8..170
                     /region_name="Flavin_utilizing_monoxygenases"
                     /note="Flavin-utilizing monoxygenases; cl19096"
                     /db_xref="CDD:450250"
ORIGIN      
        1 mwsgdasgas qplqeslfec wtttaalard tsrvrigqmv tnnvfrhpal lakmastvdv
       61 mshgwltlgi gsgspllaaq frayygsdfp ptsirsgqlr eavqillrmw tqeeatfegk
      121 yyqvngainq pkgvqqphip lliagggeqv tlklvaqyga acslygdpqt al
//
LOCUS       WP_236031521             123 aa            linear   BCT 02-MAR-2025
DEFINITION  glyoxalase superfamily protein [Ktedonospora formicarum].
ACCESSION   WP_236031521
VERSION     WP_236031521.1
KEYWORDS    RefSeq.
SOURCE      Ktedonospora formicarum
  ORGANISM  Ktedonospora formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040323.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19581.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Ktedonospora formicarum"
                     /db_xref="taxon:2778364"
     Protein         1..123
                     /product="glyoxalase superfamily protein"
                     /GO_process="GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /calculated_mol_wt=13332
     Region          9..122
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 maneqiqmvm iavtdmakak afyaeqlgfq vttdygqgdq hwvtlalpgg gatltlstlh
       61 gnmkpgsmrm ylstsnieet ynglkakdak andikddlyg pgsgvkwfdl rdpdgnvwqv
      121 vqs
//
LOCUS       WP_236031531             237 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome P450 [Ktedonospora formicarum].
ACCESSION   WP_236031531
VERSION     WP_236031531.1
KEYWORDS    RefSeq.
SOURCE      Ktedonospora formicarum
  ORGANISM  Ktedonospora formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonospora.
REFERENCE   1  (residues 1 to 237)
  AUTHORS   Werck-Reichhart,D. and Feyereisen,R.
  TITLE     Cytochromes P450: a success story
  JOURNAL   Genome Biol 1 (6), REVIEWS3003 (2000)
   PUBMED   11178272
REFERENCE   2  (residues 1 to 237)
  AUTHORS   Graham-Lorence,S., Amarneh,B., White,R.E., Peterson,J.A. and
            Simpson,E.R.
  TITLE     A three-dimensional model of aromatase cytochrome P450
  JOURNAL   Protein Sci 4 (6), 1065-1080 (1995)
   PUBMED   7549871
REFERENCE   3  (residues 1 to 237)
  AUTHORS   Degtyarenko,K.N. and Archakov,A.I.
  TITLE     Molecular evolution of P450 superfamily and P450-containing
            monooxygenase systems
  JOURNAL   FEBS Lett 332 (1-2), 1-8 (1993)
   PUBMED   8405421
REFERENCE   4  (residues 1 to 237)
  AUTHORS   Nelson,D.R., Kamataki,T., Waxman,D.J., Guengerich,F.P.,
            Estabrook,R.W., Feyereisen,R., Gonzalez,F.J., Coon,M.J.,
            Gunsalus,I.C., Gotoh,O. et al.
  TITLE     The P450 superfamily: update on new sequences, gene mapping,
            accession numbers, early trivial names of enzymes, and nomenclature
  JOURNAL   DNA Cell Biol 12 (1), 1-51 (1993)
   PUBMED   7678494
REFERENCE   5  (residues 1 to 237)
  AUTHORS   Guengerich,F.P.
  TITLE     Reactions and significance of cytochrome P-450 enzymes
  JOURNAL   J Biol Chem 266 (16), 10019-10022 (1991)
   PUBMED   2037557
REFERENCE   6  (residues 1 to 237)
  AUTHORS   Nebert,D.W. and Gonzalez,F.J.
  TITLE     P450 genes: structure, evolution, and regulation
  JOURNAL   Annu Rev Biochem 56, 945-993 (1987)
   PUBMED   3304150
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00067.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Ktedonospora formicarum"
                     /db_xref="taxon:2778364"
     Protein         1..237
                     /product="cytochrome P450"
                     /GO_function="GO:0004497 - monooxygenase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=26366
     Region          <8..230
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(69..70,73..74,77..78,81,114,123,125,148,175..177,
                     181..185,188..189)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(69,72..73,77,121..124)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
ORIGIN      
        1 mgclrsalvt mppgfmlasq crirmceymr qlsakrrayp rndllsalva gndpdgclle
       61 pdllatmqll livghettvn litngmlall rhpevfdrlq hnldlaipil eeiqrydppv
      121 qfvkrttltd vpianvtipq gapvilllas gsrdparfvd pdrfwperdd nehlgfgsgd
      181 hycvdaplar levvtalkaf arrlevprla cdppsyrkna alrgpehlpv aferlnd
//
LOCUS       WP_236031593             426 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Ktedonospora
            formicarum].
ACCESSION   WP_236031593
VERSION     WP_236031593.1
KEYWORDS    RefSeq.
SOURCE      Ktedonospora formicarum
  ORGANISM  Ktedonospora formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024949.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13560.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Ktedonospora formicarum"
                     /db_xref="taxon:2778364"
     Protein         1..426
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=49087
     Region          <15..74
                     /region_name="HipB"
                     /note="Transcriptional regulator, contains XRE-family HTH
                     domain [Transcription]; COG1396"
                     /db_xref="CDD:441006"
     Region          77..>259
                     /region_name="FxSxx_TPR"
                     /note="FxSxx-COOH system tetratricopeptide repeat protein;
                     NF040586"
                     /db_xref="CDD:468560"
ORIGIN      
        1 mrfgtrlree rlrrhlsqee laevlalsar sirrweqgqt lpqpsvrlql crffglrpee
       61 lfedqeasip rtplwcvpyp rnpfftgrde lltslhtsly tdqeetfthp yalhglggvg
      121 ktqialeyiy rfsqtyravf wigaetaesl alsllqlaet lqlperddkd qqriitavrn
      181 wltehdqwll icdnvedlgm ldhilpfaqh gtvllttrrq vlgtrarsip llpmgheegl
      241 lfllrrarvl eaeatpehvh qlagqqptqh aaatelvvlm gdclwrsirr gptwkrrgaa
      301 cppiwsfsvl svllfsssea rgrghritrc qfrsrsrsls prrpnatqry etfcvsvhcc
      361 srkrslkssf argasileqc wrwhaatrwn gigllpsrvp ipcsrarlkh rrsqstnwcr
      421 rcswia
//
LOCUS       WP_236031597             175 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Ktedonospora formicarum].
ACCESSION   WP_236031597
VERSION     WP_236031597.1
KEYWORDS    RefSeq.
SOURCE      Ktedonospora formicarum
  ORGANISM  Ktedonospora formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonospora.
REFERENCE   1  (residues 1 to 175)
  AUTHORS   Vertes,A.A., Inui,M., Kobayashi,M., Kurusu,Y. and Yukawa,H.
  TITLE     Isolation and characterization of IS31831, a transposable element
            from Corynebacterium glutamicum
  JOURNAL   Mol Microbiol 11 (4), 739-746 (1994)
   PUBMED   8196545
REFERENCE   2  (residues 1 to 175)
  AUTHORS   van der Zee,A., Agterberg,C., van Agterveld,M., Peeters,M. and
            Mooi,F.R.
  TITLE     Characterization of IS1001, an insertion sequence element of
            Bordetella parapertussis
  JOURNAL   J Bacteriol 175 (1), 141-147 (1993)
   PUBMED   8093238
REFERENCE   3  (residues 1 to 175)
  AUTHORS   Johansen,E. and Kibenich,A.
  TITLE     Isolation and characterization of IS1165, an insertion sequence of
            Leuconostoc mesenteroides subsp. cremoris and other lactic acid
            bacteria
  JOURNAL   Plasmid 27 (3), 200-206 (1992)
   PUBMED   1325060
REFERENCE   4  (residues 1 to 175)
  AUTHORS   Cirillo,J.D., Barletta,R.G., Bloom,B.R. and Jacobs,W.R. Jr.
  TITLE     A novel transposon trap for mycobacteria: isolation and
            characterization of IS1096
  JOURNAL   J Bacteriol 173 (24), 7772-7780 (1991)
   PUBMED   1660454
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013753.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01610.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Ktedonospora formicarum"
                     /db_xref="taxon:2778364"
     Protein         1..175
                     /product="transposase"
                     /calculated_mol_wt=19619
     Region          <18..175
                     /region_name="COG3464"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442687"
ORIGIN      
        1 mvllhqelva rgykgsyesv rdhlvrrlpg gkknackgak lsptpppvrq vmflflrrpe
       61 dldkeergti lqlrqsssel dlaytlvqef atmrrtrtge nldawlakav asqipefqsf
      121 vvgierdkas vqpgltrpes ngivegkink lklvkrmgyg raafpllrqr vlhal
//
LOCUS       WP_236031716             188 aa            linear   BCT 02-MAR-2025
DEFINITION  SPASM domain-containing protein, partial [Helicobacter cinaedi].
ACCESSION   WP_236031716
VERSION     WP_236031716.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter cinaedi
  ORGANISM  Helicobacter cinaedi
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 188)
  AUTHORS   Haft,D.H. and Basu,M.K.
  TITLE     Biological systems discovery in silico: radical
            S-adenosylmethionine protein families and their target peptides for
            posttranslational modification
  JOURNAL   J Bacteriol 193 (11), 2745-2755 (2011)
   PUBMED   21478363
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024584.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13186.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Helicobacter cinaedi"
                     /db_xref="taxon:213"
     Protein         <1..188
                     /product="SPASM domain-containing protein"
     Region          <1..135
                     /region_name="AslB"
                     /note="Sulfatase maturation enzyme AslB, radical SAM
                     superfamily [Posttranslational modification, protein
                     turnover, chaperones]; COG0641"
                     /db_xref="CDD:440406"
     Region          97..150
                     /region_name="SPASM"
                     /note="Iron-sulfur cluster-binding SPASM domain; cl41754"
                     /db_xref="CDD:477760"
ORIGIN      
        1 qralnaldya seagmaafpn vifghynakd pdlfalldya kakgytsyli mampfgslke
       61 drmtaedfki ldgirknydv vfntwdmydk tqtkisgcwt vnrtyitplg evlvcpyini
      121 signikeqsl keildygfsi kyfgefspic isahnfkfre kflpedrtif tpykakeifg
      181 kedyieqc
//
LOCUS       WP_236031753             355 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Helicobacter cinaedi].
ACCESSION   WP_236031753
VERSION     WP_236031753.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter cinaedi
  ORGANISM  Helicobacter cinaedi
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 355)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Helicobacter cinaedi"
                     /db_xref="taxon:213"
     Protein         1..>355
                     /product="AMP-binding protein"
     Region          13..355
                     /region_name="AMP-binding"
                     /note="AMP-binding enzyme; pfam00501"
                     /db_xref="CDD:459834"
ORIGIN      
        1 mcvssfmhkm scygdknali lndtpytyae lckkmsafsl sqtmltipnn avialrgdys
       61 lsyiiaflal ckkqciiapl lprnidislq dfgvefvldt qenkldsisp kshslldslk
      121 kqnngglilf ssgstgkpka ivhnlntlle sycnkrqnpl rimsvylpdh iagidvmlnt
      181 fggggsliip kerspqwile slqkhkveil ptsptllrll lvaglgnydl thlklviygs
      241 ekmssklles lqqalphtrf kqsfgtsetn aiktkqtdes dfaeffriin agykivdnil
      301 ylkshtnalg ylnsdnsvfd negyfatgdl vevktingee yikiigrake vinvg
//
LOCUS       WP_236031769             388 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 76 protein [Ktedonospora formicarum].
ACCESSION   WP_236031769
VERSION     WP_236031769.1
KEYWORDS    RefSeq.
SOURCE      Ktedonospora formicarum
  ORGANISM  Ktedonospora formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonospora.
REFERENCE   1  (residues 1 to 388)
  AUTHORS   Thompson,A.J., Speciale,G., Iglesias-Fernandez,J., Hakki,Z.,
            Belz,T., Cartmell,A., Spears,R.J., Chandler,E., Temple,M.J.,
            Stepper,J., Gilbert,H.J., Rovira,C., Williams,S.J. and Davies,G.J.
  TITLE     Evidence for a boat conformation at the transition state of GH76
            alpha-1,6-mannanases--key enzymes in bacterial and fungal
            mannoprotein metabolism
  JOURNAL   Angew Chem Int Ed Engl 54 (18), 5378-5382 (2015)
   PUBMED   25772148
  REMARK    Erratum:[Angew Chem Int Ed Engl. 2016 Feb 5;55(6):1949. doi:
            10.1002/anie.201511540.. PMID: 26836331]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015616.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03663.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Ktedonospora formicarum"
                     /db_xref="taxon:2778364"
     Protein         1..388
                     /product="glycoside hydrolase family 76 protein"
                     /calculated_mol_wt=43784
     Region          14..354
                     /region_name="COG4833"
                     /note="Predicted alpha-1,6-mannanase, GH76 family
                     [Carbohydrate transport and metabolism]"
                     /db_xref="CDD:443861"
ORIGIN      
        1 mvrkvivstf llamsvalvs mtatpaqaks rkenenraia syqamqkyfy kqdgsylyae
       61 qypsassdna ysyewpfsqa hiatidlsyi pgtgqnyqgd vvdrsqgqer ywnttgttgl
      121 pgydsyprpp ygnggdkfyd dnewvglakv qlyamngdts alerakqifd lvvsgwdtds
      181 shpaaggvfw tqatwsndrn tvsnmpgael glrlyqatgn qyyldwarkm ydwtnahlla
      241 pnglywdhid lagniektqw synqgvpvgv nvlfyqitgd vtylhrakdi anaalayygt
      301 dnrlygqpaf fnsiffknll llqsinhdkr ytetmqayad kvwdtyrdpa tglfhfngsq
      361 stqvieqaai tqiyavlawt paqyrvly
//
LOCUS       WP_236031816             278 aa            linear   BCT 02-MAR-2025
DEFINITION  PhnD/SsuA/transferrin family substrate-binding protein
            [Ktedonospora formicarum].
ACCESSION   WP_236031816
VERSION     WP_236031816.1
KEYWORDS    RefSeq.
SOURCE      Ktedonospora formicarum
  ORGANISM  Ktedonospora formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12974.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Ktedonospora formicarum"
                     /db_xref="taxon:2778364"
     Protein         1..278
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /calculated_mol_wt=31280
     Region          20..239
                     /region_name="Phosphonate-bd"
                     /note="ABC transporter, phosphonate, periplasmic
                     substrate-binding protein; pfam12974"
                     /db_xref="CDD:432911"
ORIGIN      
        1 mqsptlifet fldpsyfkpy qyiveyiers vrvptlllng ealedfsags adigvvsaph
       61 flqllsqpsr pveaiaaplf lgareldlsf fdiivhhdsp yhcveelyrc iwacharamr
      121 sanrplkrnd ipmisireik etttqaqalr lilkrevdat sidsllfnlv ihnspniaar
      181 vrslgcysls tspivvvash vseqlktqvq eallcahhha hlsphlqdaq verflpltni
      241 ynrrehrwvc qathkqraia dgrptlmkrv ttygvggl
//
LOCUS       WP_236031890             100 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-galactosidase [Ktedonospora formicarum].
ACCESSION   WP_236031890
VERSION     WP_236031890.1
KEYWORDS    RefSeq.
SOURCE      Ktedonospora formicarum
  ORGANISM  Ktedonospora formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonospora.
REFERENCE   1  (residues 1 to 100)
  AUTHORS   Shimizu,T., Kobayashi,T., Ba-Thein,W., Ohtani,K. and Hayashi,H.
  TITLE     Sequence analysis of flanking regions of the pfoA gene of
            Clostridium perfringens: beta-galactosidase gene (pbg) is located
            in the 3'-flanking region
  JOURNAL   Microbiol Immunol 39 (9), 677-686 (1995)
   PUBMED   8577281
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014502.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02449.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Ktedonospora formicarum"
                     /db_xref="taxon:2778364"
     Protein         1..100
                     /product="beta-galactosidase"
                     /EC_number="3.2.1.23"
                     /GO_component="GO:0009341 - beta-galactosidase complex
                     [Evidence IEA]"
                     /GO_function="GO:0004565 - beta-galactosidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=11055
     Region          1..>83
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
ORIGIN      
        1 mqechfevat lgvfswvslq peedrftfew ldtilenlaa agrfaclatp saaqpawisq
       61 cypdvlrage tgvrwhhswh agctdgivnl fvggkyidel
//
LOCUS       WP_236031896             394 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Ktedonospora formicarum].
ACCESSION   WP_236031896
VERSION     WP_236031896.1
KEYWORDS    RefSeq.
SOURCE      Ktedonospora formicarum
  ORGANISM  Ktedonospora formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13191.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Ktedonospora formicarum"
                     /db_xref="taxon:2778364"
     Protein         1..394
                     /product="AAA family ATPase"
                     /calculated_mol_wt=44393
     Region          66..>110
                     /region_name="NTP_transf_8"
                     /note="Nucleotidyltransferase; cl02233"
                     /db_xref="CDD:470500"
     Region          151..>318
                     /region_name="PRK04841"
                     /note="HTH-type transcriptional regulator MalT"
                     /db_xref="CDD:235315"
ORIGIN      
        1 mpklpahvll wstehhlyfl dtpnhpsqli ipeneeawra wlmthssfsf qgqhghlnvl
       61 kefrargtgy wyayrtssgr nrkrylgtst tltlerleei aqalqeseqr plptpthapp
      121 sipylqsqsa ekdvpfsqge qgridtearv mmaitrlapp rlpatlvnre rllsilesal
      181 trpltilsas agwgkttlls twahshqeav awlslepldn dpmrfwisii aalrrcrpei
      241 garalallhs peslslsvtt llneladqha ettspillil ddyhvidesm ihasltfwle
      301 hlppyvhlll asridpdlpl pafvrvviwk rsaipicalr gkkrtlfsln vwdsfsqrpi
      361 srcwkralra glpdsnspps cskkalilps mcgh
//
LOCUS       WP_236031906             118 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Ktedonospora formicarum].
ACCESSION   WP_236031906
VERSION     WP_236031906.1
KEYWORDS    RefSeq.
SOURCE      Ktedonospora formicarum
  ORGANISM  Ktedonospora formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024751.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13358.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Ktedonospora formicarum"
                     /db_xref="taxon:2778364"
     Protein         1..118
                     /product="transposase"
                     /calculated_mol_wt=13434
     Region          <1..>108
                     /region_name="transpos_IS630"
                     /note="IS630 family transposase; NF033545"
                     /db_xref="CDD:468076"
ORIGIN      
        1 medvldvytr pynashplic mdeggktlqa qahdplpmra gqaewegdkh ewertcsvfl
       61 aveplagkri ieararrtke dwayflreli eihsphakki vlvmdnlnvr tvqpsatr
//
LOCUS       WP_236031979             297 aa            linear   BCT 02-MAR-2025
DEFINITION  PD-(D/E)XK nuclease family protein [Dickeya parazeae].
ACCESSION   WP_236031979
VERSION     WP_236031979.1
KEYWORDS    RefSeq.
SOURCE      Dickeya parazeae
  ORGANISM  Dickeya parazeae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Dickeya.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025639.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14281.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Dickeya parazeae"
                     /db_xref="taxon:2893572"
     Protein         1..297
                     /product="PD-(D/E)XK nuclease family protein"
                     /calculated_mol_wt=34782
     Region          <6..81
                     /region_name="PDDEXK_4"
                     /note="PD-(D/E)XK nuclease superfamily; pfam14281"
                     /db_xref="CDD:433835"
ORIGIN      
        1 mltfldgvia ienkpwaadq enqlrdyalw lnkrerpwtl iylcnhepse lslpehtpev
       61 lkknivtisw yevvewlntc lcdvkaaavr ifveslvkyi qksvngefim dnsrelseii
      121 rkdnrsiesa fmifnqmnev rdsllnefil alndsfknyp fvvqyynqss lkygtnfyir
      181 fypssyfslc wefgrsnysd lyfgisdesl gadadrteki stamsalfsa sqgkiskhws
      241 wwswdldpqg rnriprnwsn dgavwiklre rgegsifeti reviltvyqk mdldllr
//
LOCUS       WP_236032113              85 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF596 domain-containing protein [Dickeya parazeae].
ACCESSION   WP_236032113
VERSION     WP_236032113.1
KEYWORDS    RefSeq.
SOURCE      Dickeya parazeae
  ORGANISM  Dickeya parazeae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Dickeya.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016475.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04591.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Dickeya parazeae"
                     /db_xref="taxon:2893572"
     Protein         1..85
                     /product="DUF596 domain-containing protein"
                     /calculated_mol_wt=9803
     Region          <5..82
                     /region_name="DUF596"
                     /note="Protein of unknown function, DUF596; cl10492"
                     /db_xref="CDD:471977"
ORIGIN      
        1 miiylkriff dilarllney kiklaangkf wsgtieeqlg mlqtawpqyp sddedddldd
       61 ygmwflvkap agvvwltsdg relwt
//
LOCUS       WP_236032161             242 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6882 domain-containing protein [Dickeya parazeae].
ACCESSION   WP_236032161
VERSION     WP_236032161.1
KEYWORDS    RefSeq.
SOURCE      Dickeya parazeae
  ORGANISM  Dickeya parazeae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Dickeya.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF044878.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21813.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Dickeya parazeae"
                     /db_xref="taxon:2893572"
     Protein         1..242
                     /product="DUF6882 domain-containing protein"
                     /calculated_mol_wt=27120
ORIGIN      
        1 minflktlfg gketgatrdt valadphlti erannemqlr tqaavemwgl dvaswavdld
       61 agiitftnne kkmvitapvq vigtyntedg twlwgwehss vseslgefar gvrrfgeqyg
      121 kaelttrkit asmdeaweft alacylnegq gglpwfvrfn rrvyglwfcn hkqkglsasm
      181 tllrilsgqc vtpparhdyr ekatnnaqan rcwqlnkktg rivgslpafl mkinpnghqy
      241 kv
//
LOCUS       WP_236032165            5388 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Dickeya parazeae].
ACCESSION   WP_236032165
VERSION     WP_236032165.1
KEYWORDS    RefSeq.
SOURCE      Dickeya parazeae
  ORGANISM  Dickeya parazeae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Dickeya.
REFERENCE   1  (residues 1 to 5388)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 5388)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..5388
                     /organism="Dickeya parazeae"
                     /db_xref="taxon:2893572"
     Protein         1..5388
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=583011
     Region          2..>525
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          619..902
                     /region_name="hot_dog"
                     /note="The hotdog fold was initially identified in the E.
                     coli FabA (beta-hydroxydecanoyl-acyl carrier protein
                     (ACP)-dehydratase) structure and subsequently in 4HBT
                     (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A
                     number of other seemingly unrelated...; cl00509"
                     /db_xref="CDD:469797"
     Region          <1060..1409
                     /region_name="KR_2_SDR_x"
                     /note="ketoreductase (KR), subgroup 2, complex (x) SDRs;
                     cd08953"
                     /db_xref="CDD:187656"
     Site            order(1185..1186,1188,1208..1211,1235..1238,1263..1265,
                     1286..1287,1309..1310,1324,1357)
                     /site_type="other"
                     /note="putative NADP binding site [chemical binding]"
                     /db_xref="CDD:187656"
     Site            order(1287,1311,1324,1328)
                     /site_type="active"
                     /db_xref="CDD:187656"
     Region          1445..1522
                     /region_name="PKS_PP"
                     /note="Phosphopantetheine attachment site; smart00823"
                     /db_xref="CDD:214834"
     Region          1570..>2109
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          2190..2472
                     /region_name="PS-DH"
                     /note="Polyketide synthase dehydratase; pfam14765"
                     /db_xref="CDD:434191"
     Region          2513..2593
                     /region_name="PKS_PP"
                     /note="Phosphopantetheine attachment site; smart00823"
                     /db_xref="CDD:214834"
     Region          2632..2712
                     /region_name="PKS_PP"
                     /note="Phosphopantetheine attachment site; smart00823"
                     /db_xref="CDD:214834"
     Region          2870..>3410
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          3510..3798
                     /region_name="hot_dog"
                     /note="The hotdog fold was initially identified in the E.
                     coli FabA (beta-hydroxydecanoyl-acyl carrier protein
                     (ACP)-dehydratase) structure and subsequently in 4HBT
                     (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A
                     number of other seemingly unrelated...; cl00509"
                     /db_xref="CDD:469797"
     Region          3896..4282
                     /region_name="KR_2_SDR_x"
                     /note="ketoreductase (KR), subgroup 2, complex (x) SDRs;
                     cd08953"
                     /db_xref="CDD:187656"
     Site            order(4058..4059,4061,4081..4084,4109..4112,4137..4139,
                     4160..4161,4183..4184,4198,4231)
                     /site_type="other"
                     /note="putative NADP binding site [chemical binding]"
                     /db_xref="CDD:187656"
     Site            order(4161,4185,4198,4202)
                     /site_type="active"
                     /db_xref="CDD:187656"
     Region          <4286..4377
                     /region_name="AcpA"
                     /note="Acyl carrier protein/domain [Lipid transport and
                     metabolism, Secondary metabolites biosynthesis, transport
                     and catabolism]; COG3433"
                     /db_xref="CDD:442659"
     Region          4334..4403
                     /region_name="AcpP"
                     /note="Acyl carrier protein [Lipid transport and
                     metabolism]; COG0236"
                     /db_xref="CDD:440006"
     Region          4469..>4997
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          <5036..5371
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
ORIGIN      
        1 mdiaiigisc rfpdannysd fweniihqrn svseiadvnr dtqpdnrrsl hwpdasekrw
       61 aafvnnvegf dnqffgvipk vaetmdpqqr imleltwscl edagiapstl rghkvgvilg
      121 vfnndykelq enthapieah hstgtatsii anrishffgf rgpsvaidta csgslnaihn
      181 aiqaivsgdc diaisggvnl iltstrhqsf akmgmmsptg achsfdsrad gyvrgegagv
      241 lllkpldkal adgdvihgvi kgsavnhcgt tytltypsae aqadvivdah tnagvpvdsi
      301 glveahgtgt pkgdpiefsg lthafstlaq qqgttlneay cgvtsvksni ghleaaagva
      361 giikvllafk hrtlpplrhf qalnpkidtt atpfffvdka rewprlaqdt prragvssfg
      421 fggtnahivl eeapepvnaa hqenqpatgt pylivlsaks paallqrqkd lidwlrehad
      481 aslsavsatl llrrdhlayr yscvgsdrqa iiqaltqave qgpvslqehv addaqalena
      541 ciegeslfda lreaqttaat pllqqlgacy vrgaqlewsr lfdganpphi alpgypfmht
      601 afwlsdsyrv daaasalrga rhrvvnvgss ryqarlqgde ffiaghqigg qtilpgvvyl
      661 elvraaftda ialnetdals fsqvawlkpl efhdaatdlf iqldphqpgk qwlfqvidnd
      721 qalycqgmvg fsdaehpalp avaltddapv rdttasyqll dslqmcygap lraiqqirfn
      781 eyaciaqltl pdaplsdahs ndfvihpsla dgalqsavvw ateklrasrq dsqqgalvip
      841 faleglvllr pchsamtati tvsdehllhd gvfkvdihis eanhperval vfrglslrvl
      901 ddtltaadrs kpehrlpals dginlyqpyw iekpvsaade pmtqlvlvge eqdvdrlasl
      961 laqsenppqm qrillasald vnrevasawv rpghhddfia avdallsqga tfervlwvna
     1021 pqasadfatr lnqgphslfa ltkammrkvk karfvhfhla denlpdvaai sgfyrtlrve
     1081 kpayigrvvq yeavangeld astaipalik tefsdvskda dvryrqgvrl vrrfvvdtps
     1141 sasahpssra iaavdmasva davnrpvsap tvlrqqgtyl itgglgalgl ifarflcsry
     1201 gatvylsgrs aldeqrqqql ddlntlggna iyqacdmndp asvqaligai rtaghelngv
     1261 ihsagviedn filrkspeaf grvitpkaig twllddatre lpldffvlfs svtgvlgnmg
     1321 qcdyafgnaf edyfafqrnv rqqqgersgk tlslnwpywq dggmrlteke agflksqfgi
     1381 vplltedgia ifdyalqsqa sqlvvmpgvp geraridevl gvvepttass qqpdaaalas
     1441 tevtdphalq dvvirylsel farklqipph ferhgffrdy gfdsvvvidl vnelkktfgs
     1501 alpmtlffey qtmdelsrfl lencqdacrg lqgnapsaav vppalhaaas tldsvravvp
     1561 apraaqptln eddiaiigia grypeaqnle qfwanlsqgr dcvieipadr wddrwfqqga
     1621 atpgksysrw ggflsdverf dlryfnispk eteimdpnew lflesvthai edagytadkl
     1681 apahagrenr vgvyvgmmwg dyqlhavtsp eqewttshss ywsvanrvsh ffnfsgpsma
     1741 ldtacssslt aihiacqalr sgdipvaitg gvnlslhpyk yhllsnmhfl ssdgrcrsfg
     1801 eggtgyvpge gvgavvlkpl sraqaegdhi ygiirgtavn hggktsgftv pnakrqaeli
     1861 aealetarvn prhisyveah gtgtklgdpi eisglnkafs iagdsskyca igsvkanigh
     1921 leaaagmsal tkvllqmkhq tlvpsiqsdv inpfidfqsg pfrvqqsleh wqrpvleviq
     1981 qdgqsvtrei priagissfg aggsnahliv eeyiappsas vdadkgkpal ivlsarrepa
     2041 lqamagqlad fiaqhpalsl qdmaytlqvg rvaheyrlaf vaetateavn llraytqqql
     2101 sglstghrdn lrqatstppl aewlkqgrlg algeawangh evdwsqlhva trrqrlslpg
     2161 yafqrqdcwa palpataplt naasgvgvlh plidanistl avqafrkrlr aeefflsdhr
     2221 lgdnrilpga ayiemslsas elalqgralp asgerpllsq vqniqwrqpi lvasddmeve
     2281 ialtpsqggl dfdiyradgd qrhvygsgrl cedaspqpep anlhrlqang qvyqrndida
     2341 afrqrgftlg ptfqviecly anaeealael kfpdglsaas vvqpfilpps lldgalrtal
     2401 giggfsatan tlevpvalak lqifkpidgi cyayarrdna vggatasyhi dlldsignvv
     2461 vrltqlqtqa vphlgmkssr avkvtssapm gadvtrapqp vamasampva sqqsagavsa
     2521 hdalvstlit qvvdvtkldi gevtasgpls nygldsmmil alneklaaaf eglpqtlfye
     2581 yedlaslady llenypdqvt aftgvvaaap qavaqsasid atipvaptia sataptrpvr
     2641 dsvleylian ivevtkldas evrpatqlsd ygldsmmila lngklaatfg evsqtlfyey
     2701 pdidsladfl cesypeqvaa lqpttavapa pvaltlpees rvsaatgdte gdddassrgl
     2761 fdsltaaigp taanlsvltp lwqwpldtvn lirlqhelda rfteahasdv yryqslaewa
     2821 etvqvapqpa sapartnevs aaparptlas llnhsridal krhtsgeaga ssdiavvgls
     2881 grypgarnvd efwanltggv dsvteiplsr wdyhphfspe rgpknkvysk wggfiddvdk
     2941 fdsqyfnisp reaelldpqe rlflqtawec isdasysrqa lskaqvgvyv gvmwshyqci
     3001 ettekqhesg wamslhssva nrvsfyfnln gpsvaldtmc sssltalhma cqaiqngdcn
     3061 maiagginli vhpmkyyqlg qnqflssdgr crafgeggdg yvpgegmgav llkplqqaia
     3121 dgdqiygvik atalnhggkt sgftvpnqaa qsnvistals ragwdpasvd yieahgtgtm
     3181 lgdpieisgl tkafsrisaq hhaqqgatpa llpgqcrigs vksnighles aagiagltki
     3241 llqlrhrqiv pslhsrtlne kinfaaspfr vvqslepwda aldhprragl safgaggsna
     3301 hvlieeaptr asaylqlgep rlfvlsadsd arlalyverm vhflrqavre phtapdfdsl
     3361 afsslvgrda mterlavvas slddllnqle qyqrdgaakq lfrghlaggg erldtilegk
     3421 qldelitslv qerqllrlgr lwttmldvnw qqfapslftt kgmttsgstt sttagsvrrv
     3481 sfpplplmlr shwlalpsaq dashraaslh plidqnistl aqqkftkqlt gqerylrdhv
     3541 vgsrdarmil pgsayiemlh aagqlamesd wtvaairnlm wmnalevdse pvdveialah
     3601 tgddnvqvav rnrhtdvlsl eaelayrpet eqpeeewidl ealrssgkre sdqaaiyadf
     3661 armgfaygps yqvtreryrf adaalshlcl pegehadafy lhpslldgal rtclavglep
     3721 veyatpivpf slgelefrhp lgaecyayvt paqsqaggqq agstiqkhdi tlldatgrvl
     3781 arlrdfaarr leqdarsaqp lasqdvqyya yewqasplpa vvsdastrta ttrvlvlsdn
     3841 eslaealrar ygddtriita tsasafaqhd shrfsvdtqs assmralcdq laeqqwwpth
     3901 ivqaigtdnh fddvtaigna splhaplqal rhlfvaletv npgqalrcvn vytasddqve
     3961 pqqdavsgya rslltinhrf elftlrsdan daasladavy qefeqrpqal aglevayrqg
     4021 vryqrqagai tpppadgqgs qpqlrfvqhg hyvitggagk lgllmaqyla sryqarlvls
     4081 grsaqpseav mqqlaamrel gaevcyvaad vaqdgqadal iaqakaafga lngvlhcagv
     4141 asatpmtals ddefdaligp kvdglvaldr ataqeplavf infssvsavl gdlgsgayaa
     4201 gnrfmdshal wrtqqvtkgq rsgqtlsvnw plwasgqmni eqddaslfef sgmaalgqea
     4261 giialerall eqrpellvav gdrnkvarsl riqveetvqp apsvavptlt qaprpqptav
     4321 iatpagdsay arsesalkem isaitklpas diavdatfeq lgmdsvmlme lravlekeyd
     4381 glpktapfey nttaklagyl cerygvtpvv htpeaapqrt dtvshhhasa pvappvkrtv
     4441 paaatdalrs ramrtpmrss lsstasiqad sdavaiigma gefpgaasla dfwadiqagk
     4501 eslsaipdar wtlpaedngn pryvnrggfl snvdvfdpam frmsgeeasr ldpqvrvllr
     4561 sawhalenag ytpaalndqq vgvyvgamne dftwvmaeiy artgrypgag svvselanri
     4621 sflmnlrgps fsiattcass ltsvhiarka ilggecdmal aggvnlslhp skymllqemk
     4681 vlsadgkeht fderanglip segsgivvlk rlsraladgd hiygvlrgss ighagtgagq
     4741 ylpnltvmee tavrainear idvneltyie shgaatelgd pielkalsna lrrqtqaqhf
     4801 calgtkanlg hmeaasgics likvllsmqh grvspcvnlq rintsfehet safvfpreaq
     4861 ewqtnargsr laginaygmg gstafvvves adalvrlhar qlasreenas ahaqithtqi
     4921 vvlsaqqaer vvayatelrd fiqqqqqqgr alsladlayt sqtgrvmldh rlaivatsqe
     4981 dllaklegfi aepgadhsrr etysgnvhds kevsqliage agkhfvrelv qnrqfanvat
     5041 lwirgcdidw sllhdaeprq rvpfpgypfa sqpcdlyaal rldapvrqtp rqesaaldae
     5101 atvspvvpqa wfaravpvdn tsthavstqd dtslqafwrg llqadedvgs ltasallgda
     5161 tvldedaeqp llsaelhidp dtvvamqtct qrqdiavetl ltagwallin rharvkqaqf
     5221 glirhlesde prliptriqv vgrhktaawl kgvekqlsqc lehggatseq laqwggdval
     5281 fdstvalltd dvavnpavsa lfathpslrl allvrlegsg vhvrlvcrgm diqetqlnhl
     5341 leqfvllldg aarhpdknpa alpmrskgeg rkaflktlek lnqqdqtp
//
LOCUS       WP_236031685             633 aa            linear   BCT 02-MAR-2025
DEFINITION  3'-5' exonuclease [Ktedonospora formicarum].
ACCESSION   WP_236031685
VERSION     WP_236031685.1
KEYWORDS    RefSeq.
SOURCE      Ktedonospora formicarum
  ORGANISM  Ktedonospora formicarum
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonospora.
REFERENCE   1  (residues 1 to 633)
  AUTHORS   Zhou,M., Mao,C., Rodriguez,A.C., Kiefer,J.R., Kucera,R.B. and
            Beese,L.S.
  TITLE     Crystallization and preliminary diffraction analysis of a
            hyperthermostable DNA polymerase from a Thermococcus archaeon
  JOURNAL   Acta Crystallogr D Biol Crystallogr 54 (Pt 5), 994-995 (1998)
   PUBMED   9757117
REFERENCE   2  (residues 1 to 633)
  AUTHORS   Wang,J., Yu,P., Lin,T.C., Konigsberg,W.H. and Steitz,T.A.
  TITLE     Crystal structures of an NH2-terminal fragment of T4 DNA polymerase
            and its complexes with single-stranded DNA and with divalent metal
            ions
  JOURNAL   Biochemistry 35 (25), 8110-8119 (1996)
   PUBMED   8679562
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015089.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03104.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Ktedonospora formicarum"
                     /db_xref="taxon:2778364"
     Protein         1..633
                     /product="3'-5' exonuclease"
                     /calculated_mol_wt=70809
     Region          155..353
                     /region_name="DnaQ_like_exo"
                     /note="DnaQ-like (or DEDD) 3'-5' exonuclease domain
                     superfamily; cl10012"
                     /db_xref="CDD:447876"
     Site            order(169..172,227..228,231..233,344)
                     /site_type="active"
                     /db_xref="CDD:99828"
     Site            order(169,171,233,344)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99828"
     Site            order(170..172,227..228,231..232,344)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:99828"
     Region          410..>621
                     /region_name="POLBc"
                     /note="DNA polymerase type-B family catalytic domain.
                     DNA-directed DNA polymerases elongate DNA by adding
                     nucleotide triphosphate (dNTP) residues to the 5'-end of
                     the growing chain of DNA. DNA-directed DNA polymerases are
                     multifunctional with both synthetic...; cl10023"
                     /db_xref="CDD:353046"
     Site            order(432,435..437,467,495,499,550)
                     /site_type="active"
                     /db_xref="CDD:99921"
     Site            order(548,550..551)
                     /site_type="metal-binding"
                     /db_xref="CDD:99921"
ORIGIN      
        1 mttdsnvsvp ahqhdemlfg wdptpgivsi watrtgkali wqrqdeqvic tqasfrswlf
       61 artledlpml hsqppttlsw dmdhspisyr ildgsvgsfq yllsardgri lermllagas
      121 qrlgrqvtsl gslwedyyrv gsveqylmqt grvffrgmay ddlhrlqfdl ettsldpsqg
      181 riflvairdn rgheqileaa tpqeeptlit elctlirhld pdvienhnlf gfdlpflear
      241 aqalhvplll grdgaplple sfeeagphrr krkrysiagr elidtldavf rydfvarslp
      301 syrlkevary fgiaapervy legskiyety qhhpdlvrry alddvrevdg lsrrlmgaaf
      361 alaamaprry ervasagpam gilepmlvra ylraeaalpp ytsgqeeryg qhqggasyll
      421 aegvaehvvk advaslypsl irafrigpkc drlgaflhfm drltelrlah kraareapsg
      481 smeanqhdgt qaamktvina aygylgatsm alfadleaan eitkrgrall dgilgilrer
      541 gmvpieadtd gvyfavprew geaqertlvn evaatlpdgv kleyearyaa mlsyaiknya
      601 lltysgdmiv rgaamrssrs elcgitfqsh cla
//
LOCUS       WP_236032319             605 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase, partial [Helicobacter
            cinaedi].
ACCESSION   WP_236032319
VERSION     WP_236032319.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter cinaedi
  ORGANISM  Helicobacter cinaedi
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 605)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Helicobacter cinaedi"
                     /db_xref="taxon:213"
     Protein         <1..605
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
     Region          175..>475
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
     Site            order(183,220,396,474..475)
                     /site_type="active"
                     /db_xref="CDD:293732"
     Site            order(183,220,396,475)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293732"
ORIGIN      
        1 yaiyssdvsq fdisqtyqtl galfgffils sfgliyftsf fyktrllklg awgvsvilci
       61 glvytfvlvg dygamdhfvl qkpnfanhdl riqkyvcfil avcvsiifcl lmtkwlkqiw
      121 gilfvtlfvm ssyyfigiah slqdyakysh tqniqdsndm qpyekelfsy skteknivvm
      181 vldmfsgshm hplleqfpef ktnldgfvlf dnaisttnst ihsiatligg ehyavynmna
      241 rkdnladsit eafgvigdtf vkngydvgyf madlstrfdk aktynnnitl iqnarayany
      301 yynsnphike rmskqilakk dgakflllht glfrfapelf frsriynggv wllgdenlsn
      361 qqvalefass fyafthlhnt eskkptfkyl hslmthfpyt lsfqngecap ftqdsifdty
      421 phkdmmnyvv keyerasfqh ydteacalsy lsdfvqwlke ngiydntqif vvsdhsgfdd
      481 igipysvsqk ghrpvslflf kdfntsgklk ldsrlmanyd spsmfcdnlp ngcpnvpkni
      541 lsnypknrni istipihldi slhkknewli nhyfqvkgnv ydesswqdit esvkngtfki
      601 dgieh
//
LOCUS       WP_236032338              63 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Helicobacter cinaedi].
ACCESSION   WP_236032338
VERSION     WP_236032338.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter cinaedi
  ORGANISM  Helicobacter cinaedi
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 63)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 63)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 63)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 63)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..63
                     /organism="Helicobacter cinaedi"
                     /db_xref="taxon:213"
     Protein         <1..>63
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          1..>63
                     /region_name="GlnQ"
                     /note="ABC-type polar amino acid transport system, ATPase
                     component [Amino acid transport and metabolism]; COG1126"
                     /db_xref="CDD:440743"
ORIGIN      
        1 lknvnkyygk hhvlkdinlt ikdgeklvii gpsgsgkstt ircmngleev ssgevivggi
       61 pln
//
LOCUS       WP_236032355             236 aa            linear   BCT 02-MAR-2025
DEFINITION  outer membrane beta-barrel protein, partial [Helicobacter cinaedi].
ACCESSION   WP_236032355
VERSION     WP_236032355.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter cinaedi
  ORGANISM  Helicobacter cinaedi
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 236)
  AUTHORS   Tomb,J.F., White,O., Kerlavage,A.R., Clayton,R.A., Sutton,G.G.,
            Fleischmann,R.D., Ketchum,K.A., Klenk,H.P., Gill,S.,
            Dougherty,B.A., Nelson,K., Quackenbush,J., Zhou,L., Kirkness,E.F.,
            Peterson,S., Loftus,B., Richardson,D., Dodson,R., Khalak,H.G.,
            Glodek,A., McKenney,K., Fitzegerald,L.M., Lee,N., Adams,M.D.,
            Hickey,E.K., Berg,D.E., Gocayne,J.D., Utterback,T.R.,
            Peterson,J.D., Kelley,J.M., Cotton,M.D., Weidman,J.M., Fujii,C.,
            Bowman,C., Watthey,L., Wallin,E., Hayes,W.S., Borodovsky,M.,
            Karp,P.D., Smith,H.O., Fraser,C.M. and Venter,J.C.
  TITLE     The complete genome sequence of the gastric pathogen Helicobacter
            pylori
  JOURNAL   Nature 388 (6642), 539-547 (1997)
   PUBMED   9252185
  REMARK    Erratum:[Nature 1997 Sep 25;389(6649):412]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013975.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01856.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Helicobacter cinaedi"
                     /db_xref="taxon:213"
     Protein         <1..236
                     /product="outer membrane beta-barrel protein"
ORIGIN      
        1 enellelqkk nqnlkkgsgs ssssqdglas eltgwfvgae lgyspsvtny vnqtnnpafp
       61 lltnttfalp inlgfgyqwy pwdnagfkfr gyvgyanyns kislgnekgn qnsqaihygl
      121 eaeylydfia sqmhtfglni gtgyefgsfm gqnitsngnd infkgytsss wtssigiyyf
      181 ynvnhqfelk yryrsgygyd dggkvdvdyg stsgtstfqy astpkgsiif aynykf
//
LOCUS       WP_236032375             164 aa            linear   BCT 02-MAR-2025
DEFINITION  cyclophilin-like fold protein [Pseudomonas schmalbachii].
ACCESSION   WP_236032375
VERSION     WP_236032375.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas schmalbachii
  ORGANISM  Pseudomonas schmalbachii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037716.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18050.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Pseudomonas schmalbachii"
                     /db_xref="taxon:2816993"
     Protein         1..164
                     /product="cyclophilin-like fold protein"
                     /calculated_mol_wt=17629
     Region          42..164
                     /region_name="COG4925"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:443953"
ORIGIN      
        1 mpmssrrtrg lrtlrglsll vgllvlgcge agqhatsdlp gtasvkpees rmwmtvgehr
       61 faitladnaa arafatllpl tldmaelngn ekhgdlpktl ptnasrpgti rngdlmlygs
      121 dtlvvfyltf dspysytrlg rvddpaglal algrrgvril fsrd
//
LOCUS       WP_236032407             226 aa            linear   BCT 02-MAR-2025
DEFINITION  PDC sensor domain-containing protein [Pseudomonas schmalbachii].
ACCESSION   WP_236032407
VERSION     WP_236032407.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas schmalbachii
  ORGANISM  Pseudomonas schmalbachii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 226)
  AUTHORS   Upadhyay,A.A., Fleetwood,A.D., Adebali,O., Finn,R.D. and
            Zhulin,I.B.
  TITLE     Cache Domains That are Homologous to, but Different from PAS
            Domains Comprise the Largest Superfamily of Extracellular Sensors
            in Prokaryotes
  JOURNAL   PLoS Comput Biol 12 (4), e1004862 (2016)
   PUBMED   27049771
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 226)
  AUTHORS   Zhang,Z. and Hendrickson,W.A.
  TITLE     Structural characterization of the predominant family of histidine
            kinase sensor domains
  JOURNAL   J Mol Biol 400 (3), 335-353 (2010)
   PUBMED   20435045
REFERENCE   3  (residues 1 to 226)
  AUTHORS   Cheung,J., Bingman,C.A., Reyngold,M., Hendrickson,W.A. and
            Waldburger,C.D.
  TITLE     Crystal structure of a functional dimer of the PhoQ sensor domain
  JOURNAL   J Biol Chem 283 (20), 13762-13770 (2008)
   PUBMED   18348979
REFERENCE   4  (residues 1 to 226)
  AUTHORS   Anantharaman,V. and Aravind,L.
  TITLE     Cache - a signaling domain common to animal Ca(2+)-channel subunits
            and a class of prokaryotic chemotaxis receptors
  JOURNAL   Trends Biochem Sci 25 (11), 535-537 (2000)
   PUBMED   11084361
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 13036975
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Pseudomonas schmalbachii"
                     /db_xref="taxon:2816993"
     Protein         1..226
                     /product="PDC sensor domain-containing protein"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=24592
     Region          <2..94
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
     Region          98..222
                     /region_name="PDC1_HK_sensor"
                     /note="first PDC (PhoQ/DcuS/CitA) domain of
                     methyl-accepting chemotaxis proteins, diguanylate-cyclase
                     and similar domains; cd18773"
                     /db_xref="CDD:350341"
ORIGIN      
        1 mheavaegrn gmaamteglq hthqamerld ervthiaagt eqigqavrai ssdvhniaqv
       61 sadllgkagq vlehsqavrk dgdhlldglg afrlrlhrdm qervealade arltgdvata
      121 erllretlas dprfelfylv gsdgrqvsen ifadgvqasa gsargrdwaq rpwfravres
      181 grshvtpvyr ssatdaycft vsvpvrdrdg sllrvlgadv rlsall
//
LOCUS       WP_236032536             929 aa            linear   BCT 02-MAR-2025
DEFINITION  multicopper oxidase domain-containing protein [Pseudomonas
            schmalbachii].
ACCESSION   WP_236032536
VERSION     WP_236032536.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas schmalbachii
  ORGANISM  Pseudomonas schmalbachii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 929)
  AUTHORS   Page,C.C., Moser,C.C., Chen,X. and Dutton,P.L.
  TITLE     Natural engineering principles of electron tunnelling in biological
            oxidation-reduction
  JOURNAL   Nature 402 (6757), 47-52 (1999)
   PUBMED   10573417
REFERENCE   2  (residues 1 to 929)
  AUTHORS   Grossmann,J.G., Ingledew,W.J., Harvey,I., Strange,R.W. and
            Hasnain,S.S.
  TITLE     X-ray absorption studies and homology modeling define the
            structural features that specify the nature of the copper site in
            rusticyanin
  JOURNAL   Biochemistry 34 (26), 8406-8414 (1995)
   PUBMED   7599131
REFERENCE   3  (residues 1 to 929)
  AUTHORS   Messerschmidt,A., Ladenstein,R., Huber,R., Bolognesi,M.,
            Avigliano,L., Petruzzelli,R., Rossi,A. and Finazzi-Agro,A.
  TITLE     Refined crystal structure of ascorbate oxidase at 1.9 A resolution
  JOURNAL   J Mol Biol 224 (1), 179-205 (1992)
   PUBMED   1548698
REFERENCE   4  (residues 1 to 929)
  AUTHORS   Messerschmidt,A. and Huber,R.
  TITLE     The blue oxidases, ascorbate oxidase, laccase and ceruloplasmin.
            Modelling and structural relationships
  JOURNAL   Eur J Biochem 187 (2), 341-352 (1990)
   PUBMED   2404764
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019351.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07731.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..929
                     /organism="Pseudomonas schmalbachii"
                     /db_xref="taxon:2816993"
     Protein         1..929
                     /product="multicopper oxidase domain-containing protein"
                     /GO_function="GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=102941
     Region          269..887
                     /region_name="SufI"
                     /note="Multicopper oxidase with three cupredoxin domains
                     (includes cell division protein FtsP and spore coat
                     protein CotA) [Cell cycle control, cell division,
                     chromosome partitioning, Inorganic ion transport and
                     metabolism, Cell wall/membrane/envelope biogenesis;
                     COG2132"
                     /db_xref="CDD:441735"
     Region          472..685
                     /region_name="Cupredoxin"
                     /note="Cupredoxin superfamily; cl19115"
                     /db_xref="CDD:473140"
ORIGIN      
        1 mlgggvatat avsldyfgqp psydpsaynd ppsdprayel ngvtpansgs feqaggvpgn
       61 rktplannvl ppaqqtsfni ptngrpsplf gaqpftqtll lfeefgpvpl dpnpspppgg
      121 fpapkpgtap erdpvvvrss pvgteldafl kfpglyplps efsndrdrnp wspqissflk
      181 rmvqspaegr ppgqgwahqr ynefypqgaf ktvqagarvn ggvrdsyqrh gygqgefgpa
      241 glyyqsynfq gstkvpayki qgttkginvr fhpdmpiqsh ktiwtfdgtf ppkllmvrhg
      301 qpivmrhyna lpidpaanag fglhtitthe hnghtpaesd gftgafffpg qyydyrwplq
      361 lagydsintt asdpraafpc dpgetlyvnd aqpglkqcmn grinirgdwr etmsthwyhd
      421 hmldftaqnv ykgnaammny ysaldrgyeg ppmdaqdpnl rfpsgtvraw gnrdydvnlm
      481 iqdkawdkng qlwfnpfntd gflgdqllvn flykpylnvr arsyrfrlln gsvsryikla
      541 vvrevqgngg elkgpttkvs yervpfhmia ndgnvmehav pfdgsmdlna ngdlkdnfgi
      601 lpvqgiaery diiinfakng ikpgdkiyfi nlqehdtgrg akrtvaladv lsgaykptik
      661 dadkpdkakw dkgdpgvgmf lqlrvqsygg qdlamnpady epakpaangq pakpaglkmi
      721 pltidrndpa draklaqarh rtfvfgrnnn tdeqpwtikv ddslafsmdp rrisaapqla
      781 ngptqagfsg dgtlevwkie nsedewehpv hvhfeegiil srggkappvw eqwarkdvyr
      841 vgaladsdtl rnveiairfr efagtymehc hntqhedtsm llrwdveypg qfqlmptplp
      901 twdgvtyaps valptfrkgd gkkgpqmpf
//
LOCUS       WP_236032600             402 aa            linear   BCT 02-MAR-2025
DEFINITION  fibronectin type III domain-containing protein [Helicobacter
            cinaedi].
ACCESSION   WP_236032600
VERSION     WP_236032600.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter cinaedi
  ORGANISM  Helicobacter cinaedi
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 402)
  AUTHORS   Little,E., Bork,P. and Doolittle,R.F.
  TITLE     Tracing the spread of fibronectin type III domains in bacterial
            glycohydrolases
  JOURNAL   J Mol Evol 39 (6), 631-643 (1994)
   PUBMED   7528812
REFERENCE   2  (residues 1 to 402)
  AUTHORS   Bazan,J.F.
  TITLE     Structural design and molecular evolution of a cytokine receptor
            superfamily
  JOURNAL   Proc Natl Acad Sci U S A 87 (18), 6934-6938 (1990)
   PUBMED   2169613
REFERENCE   3  (residues 1 to 402)
  AUTHORS   Kornblihtt,A.R., Umezawa,K., Vibe-Pedersen,K. and Baralle,F.E.
  TITLE     Primary structure of human fibronectin: differential splicing may
            generate at least 10 polypeptides from a single gene
  JOURNAL   EMBO J 4 (7), 1755-1759 (1985)
   PUBMED   2992939
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012271.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00041.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Helicobacter cinaedi"
                     /db_xref="taxon:213"
     Protein         1..402
                     /product="fibronectin type III domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=44905
     Region          <82..>316
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          312..400
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(312,373,388)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(390..391,393..394)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
ORIGIN      
        1 mllsvflsac fsafnanlqe dsslprldsv ntlvdvssvg fewkfinden vkgyviyrse
       61 sgggkglqqi atiknrfath fydinlspqt kyiyafavlg endtispkse pihiqtsfid
      121 pvesvfainn qprsikliws phpnpsvdsy lierlnkage fktiktiphr leveyfdedl
      181 kdgetytyri vakshegvks kptqgisvst ipqpapieni qassdlprsi hitweaapds
      241 sgvskkyyki lfssndkdyk aiattnqtny thklqakddg atyyyqvvll gdnglegrms
      301 nnpakgsslp ppstptqfeg kmidgkatls wqipsddriv syivyrkega lwtqsarfid
      361 ihansfsdke mqkgkkysys vvsvdkhgie skptqeieli le
//
LOCUS       WP_236032640             596 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Pseudomonas schmalbachii].
ACCESSION   WP_236032640
VERSION     WP_236032640.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas schmalbachii
  ORGANISM  Pseudomonas schmalbachii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 596)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 596)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 596)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 596)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Pseudomonas schmalbachii"
                     /db_xref="taxon:2816993"
     Protein         1..596
                     /product="ATP-binding protein"
                     /calculated_mol_wt=65839
     Region          46..157
                     /region_name="KinB_sensor"
                     /note="ligand binding sensor domain of KinB and related
                     sensor histidine kinases; cd19409"
                     /db_xref="CDD:438627"
     Site            order(55,65,132,135,139,147)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:438627"
     Region          172..596
                     /region_name="NtrY"
                     /note="Signal transduction histidine kinase NtrY involved
                     in nitrogen fixation and metabolism regulation [Signal
                     transduction mechanisms]; COG5000"
                     /db_xref="CDD:444024"
ORIGIN      
        1 mpipmtlrtr lflsisalit vallglllgl fsvvqmgrdq ekgiaqnfat ieisqrlrqa
       61 lgdqlvvils ekpnparlas aqeqfrtale qgsgqaqnet erqlyaeidr asrsfmedat
      121 laglphpnll dddelsrgld llrgrlqals eyafqniass erqsrnrawl sagllgivgi
      181 ailligfvta hsiarrfgap ietmakaadk igqgdfdvtl pistvaemas lirrfglmae
      241 alrqykatni ealdqgrkrl qavldsindg lvildrmgrv ehanpvairq lfsqgdpqgr
      301 elgsildnpd laettlhvlr ggtqegtped ltveidgetr llawsmtavt hddgrnigav
      361 mvvrdvteqr nfervrsefv lrashelrtp vtgmhmafgl lqerlkfpae sreqdlmqtv
      421 deemhrlvrl indllnfsry qsglqklelq pcqvpellge vrkrfaeqae sreirlelda
      481 ddtlpnlnld hlqiervldn llgnalrhtp sggeiriqal rqgerlaiav edsgegipys
      541 qqgrifepfv qvghkkggag lglalckeiv qlhggrisvr sqpgkgtrfs islplt
//
LOCUS       WP_236032691             282 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4344 domain-containing metallopeptidase [Pseudomonas
            schmalbachii].
ACCESSION   WP_236032691
VERSION     WP_236032691.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas schmalbachii
  ORGANISM  Pseudomonas schmalbachii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025606.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14247.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Pseudomonas schmalbachii"
                     /db_xref="taxon:2816993"
     Protein         1..282
                     /product="DUF4344 domain-containing metallopeptidase"
                     /calculated_mol_wt=32162
     Region          <21..161
                     /region_name="DUF4344"
                     /note="Putative metallopeptidase; pfam14247"
                     /db_xref="CDD:433808"
     Region          199..>258
                     /region_name="DUF4344"
                     /note="Putative metallopeptidase; pfam14247"
                     /db_xref="CDD:433808"
ORIGIN      
        1 mlalpcatpl aaeppsdslp pdvarfilan tefslmhemg hmliieydlp vlgreedaad
       61 qlgflalfel ystlptaevd arlldiadyw rlewqrpkpv rervlawdsh pldeqryyni
      121 acllygsdmr rldwvpelte lpyeralycd refrqarkal dwassayqhk aiqrraaiqv
      181 tygqssgaip dfdqllapll ensnlqrlae dmvklfhppr pltvrvmacg apdawynsni
      241 geltlcyerl ahfrdlaetl prlqppyawr cpnanantls ac
//
LOCUS       WP_236032724             477 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6600 domain-containing protein [Algoriphagus pacificus].
ACCESSION   WP_236032724
VERSION     WP_236032724.1
KEYWORDS    RefSeq.
SOURCE      Algoriphagus pacificus
  ORGANISM  Algoriphagus pacificus
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Algoriphagus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042645.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20245.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Algoriphagus pacificus"
                     /db_xref="taxon:2811234"
     Protein         1..477
                     /product="DUF6600 domain-containing protein"
                     /calculated_mol_wt=53271
     Region          42..142
                     /region_name="DUF6600"
                     /note="Family of unknown function (DUF6600); pfam20245"
                     /db_xref="CDD:466396"
     Region          270..>476
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
ORIGIN      
        1 mkqknlklgl astlvlvfaf slfapkqsla etpygvsfqv fydelmpygd wvkdanygyi
       61 wlpavnqdfh pygtnghwvm teygntwvsy ydwgwapfhy grwyfddfyq swawipgydw
      121 gpawvnwrtg ggyygwaplg pgvsisvrvn ipsfhwvflp shriyhqyay ryyaprktki
      181 riynnttvin ntvvynnnry vagpnrreve rvtrqnvpvy svrgsnkpgr aavsrnglei
      241 yrpdltasrg rtvearpsrs mtsdqartar sqsrdtysss psrsaregis sgsrsasptt
      301 rgtengnrns spsrsatpsq rggsfetkpy egnrtsptsp strnretrpq sasprtqssp
      361 atrqstersg gartsapttr tqesrpqngs rtqqsptvrs nnerstgart sqpttrtqqs
      421 rtpsaartks aptvrssgss qsrtssksap artstptsrk sssgttqrst srtrgnn
//
LOCUS       WP_236032612             384 aa            linear   BCT 02-MAR-2025
DEFINITION  ribonuclease domain-containing protein, partial [Helicobacter
            cinaedi].
ACCESSION   WP_236032612
VERSION     WP_236032612.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter cinaedi
  ORGANISM  Helicobacter cinaedi
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 384)
  AUTHORS   Buckle,A.M. and Fersht,A.R.
  TITLE     Subsite binding in an RNase: structure of a barnase-tetranucleotide
            complex at 1.76-A resolution
  JOURNAL   Biochemistry 33 (7), 1644-1653 (1994)
   PUBMED   8110767
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012755.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00545.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Helicobacter cinaedi"
                     /db_xref="taxon:213"
     Protein         <1..384
                     /product="ribonuclease domain-containing protein"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0004521 - RNA endonuclease activity
                     [Evidence IEA]"
     Region          <287..382
                     /region_name="COG4290"
                     /note="Guanyl-specific ribonuclease Sa [Nucleotide
                     transport and metabolism]"
                     /db_xref="CDD:443431"
ORIGIN      
        1 pkrtynidnn tfaeqealqa inhlqiylka yynqdtipnk dkqsnkqkqa ykeqktqtkw
       61 gyilfdkdkd idstlkeltk dstipltklk efiritkeyc ptnnniknth testthttqa
      121 ntshihnnpt sidskstnnt skdsnitesk dyllgeeidi yykeewqdkq vrffayiesp
      181 ksdvgvdiel qeisytimyd edkedklflh kdsridwvdv aievislipl argvrialni
      241 gkwglkllrg naniakkara ytskrlaikd kkdkqnkkte skpikevklh tlpketqety
      301 hnykahkwqg mypgqgkgvs sknevragkt fknkdfilpq kpegtykrfd isnrhsagrf
      361 vrdmesgdvy ytkdhyetfv kiie
//
LOCUS       WP_236032617             516 aa            linear   BCT 02-MAR-2025
DEFINITION  dienelactone hydrolase family protein [Algoriphagus pacificus].
ACCESSION   WP_236032617
VERSION     WP_236032617.1
KEYWORDS    RefSeq.
SOURCE      Algoriphagus pacificus
  ORGANISM  Algoriphagus pacificus
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Algoriphagus.
REFERENCE   1  (residues 1 to 516)
  AUTHORS   Pathak,D. and Ollis,D.
  TITLE     Refined structure of dienelactone hydrolase at 1.8 A
  JOURNAL   J Mol Biol 214 (2), 497-525 (1990)
   PUBMED   2380986
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013866.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01738.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Algoriphagus pacificus"
                     /db_xref="taxon:2811234"
     Protein         1..516
                     /product="dienelactone hydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=59552
     Region          25..372
                     /region_name="COG4188"
                     /note="Predicted dienelactone hydrolase [General function
                     prediction only]"
                     /db_xref="CDD:443342"
     Region          409..516
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          439..465
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          470..500
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mkknfsrykm rqtfllifll fqftslvaqt slqeigleng pfgvgfrhei kwdssrtysr
       61 vfdysnkitp rpipisiwyp teqlstdlep mqvldymril keeeewehlp deqilnwfyy
      121 pntpsnqnhl nekttayaha elgnqkfpvi vyassfqass ienfalcefl ashgfvvlss
      181 psrgtetrwf snklskemet qardvefllk eagqfplset dkialmgfsf gglgaiitqn
      241 rndlvkalvs ldgteryqyd llsqspffdp rnldvpyihm aqkdipenvl qedkidavln
      301 tkfqlfdsls hspayklkfh klthsyfstl gvlfadrdpr qdktdyeime syklmsnyvl
      361 nffnatlkdd pqganflenn yaasakelis qevkraeees ftfqdfndla srqdyenlet
      421 lydsvlkkhp sfeipegnln tlglqlvfnp nnpsqgirvf lfavrlypns anlydslgeg
      481 ylylgekena vasfekslql ypqnenaikr leqlrk
//
LOCUS       WP_236032770             345 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 113 [Algoriphagus pacificus].
ACCESSION   WP_236032770
VERSION     WP_236032770.1
KEYWORDS    RefSeq.
SOURCE      Algoriphagus pacificus
  ORGANISM  Algoriphagus pacificus
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Algoriphagus.
REFERENCE   1  (residues 1 to 345)
  AUTHORS   Lin,H.Y., Chen,C.Y., Lin,T.C., Yeh,L.F., Hsieh,W.C., Gao,S.,
            Burnouf,P.A., Chen,B.M., Hsieh,T.J., Dashnyam,P., Kuo,Y.H., Tu,Z.,
            Roffler,S.R. and Lin,C.H.
  TITLE     Entropy-driven binding of gut bacterial beta-glucuronidase
            inhibitors ameliorates irinotecan-induced toxicity
  JOURNAL   Commun Biol 4 (1), 280 (2021)
   PUBMED   33664385
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 345)
  AUTHORS   Bardy,P., Fuzik,T., Hrebik,D., Pantucek,R., Thomas Beatty,J. and
            Plevka,P.
  TITLE     Structure and mechanism of DNA delivery of a gene transfer agent
  JOURNAL   Nat Commun 11 (1), 3034 (2020)
   PUBMED   32541663
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 345)
  AUTHORS   You,X., Qin,Z., Yan,Q., Yang,S., Li,Y. and Jiang,Z.
  TITLE     Structural insights into the catalytic mechanism of a novel
            glycoside hydrolase family 113 beta-1,4-mannanase from
            Amphibacillus xylanus
  JOURNAL   J Biol Chem 293 (30), 11746-11757 (2018)
   PUBMED   29871927
REFERENCE   4  (residues 1 to 345)
  AUTHORS   Williams,R.J., Iglesias-Fernandez,J., Stepper,J., Jackson,A.,
            Thompson,A.J., Lowe,E.C., White,J.M., Gilbert,H.J., Rovira,C.,
            Davies,G.J. and Williams,S.J.
  TITLE     Combined inhibitor free-energy landscape and structural analysis
            reports on the mannosidase conformational coordinate
  JOURNAL   Angew Chem Int Ed Engl 53 (4), 1087-1091 (2014)
   PUBMED   24339341
REFERENCE   5  (residues 1 to 345)
  AUTHORS   Zhang,Y., Ju,J., Peng,H., Gao,F., Zhou,C., Zeng,Y., Xue,Y., Li,Y.,
            Henrissat,B., Gao,G.F. and Ma,Y.
  TITLE     Biochemical and structural characterization of the intracellular
            mannanase AaManA of Alicyclobacillus acidocaldarius reveals a novel
            glycoside hydrolase family belonging to clan GH-A
  JOURNAL   J Biol Chem 283 (46), 31551-31558 (2008)
   PUBMED   18755688
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046780.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22612.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Algoriphagus pacificus"
                     /db_xref="taxon:2811234"
     Protein         1..345
                     /product="glycoside hydrolase family 113"
                     /GO_function="GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /calculated_mol_wt=40278
     Region          37..342
                     /region_name="GH113_mannanase-like"
                     /note="Glycoside hydrolase family 113 beta-1,4-mannanase
                     and similar proteins; cd19608"
                     /db_xref="CDD:381626"
     Site            order(121,126..127,169,200..201,221,261,275,314..315,327)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:381626"
ORIGIN      
        1 mkpwytkyll sslaifiamg miwwtipeeq lletaekwkg vcwvgsrapl egnelralka
       61 tganalsqtp fgwqngvnnp eirwevnaer qwwgetakgi qathdssqvl gimnmlkphl
      121 wvrgswpgei emldegdwel wfenyrgfil dyaklaeslk ipmlcigtel ektsqreedw
      181 rkviaqirkv ysgklvyaan ftefdkikfw deldyigiqa yfpladkhnp gleelkagwe
      241 kqmpkiekvv rkykkpvift eigycntvda aiepwvwpne rmevefseaa qarcyeaffe
      301 sawpkswlag vffwkwypnr hdrepdftpq gkeaeavmtk yfsie
//
LOCUS       WP_236032787             486 aa            linear   BCT 02-MAR-2025
DEFINITION  POTRA domain-containing protein [Algoriphagus pacificus].
ACCESSION   WP_236032787
VERSION     WP_236032787.1
KEYWORDS    RefSeq.
SOURCE      Algoriphagus pacificus
  ORGANISM  Algoriphagus pacificus
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Algoriphagus.
REFERENCE   1  (residues 1 to 486)
  AUTHORS   Sanchez-Pulido,L., Devos,D., Genevrois,S., Vicente,M. and
            Valencia,A.
  TITLE     POTRA: a conserved domain in the FtsQ family and a class of
            beta-barrel outer membrane proteins
  JOURNAL   Trends Biochem Sci 28 (10), 523-526 (2003)
   PUBMED   14559180
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018899.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07244.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Algoriphagus pacificus"
                     /db_xref="taxon:2811234"
     Protein         1..486
                     /product="POTRA domain-containing protein"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /calculated_mol_wt=56731
     Region          <44..486
                     /region_name="BamA"
                     /note="Outer membrane protein assembly factor BamA [Cell
                     wall/membrane/envelope biogenesis]; COG4775"
                     /db_xref="CDD:443807"
ORIGIN      
        1 msskirniiy vgllfssifl glgiprstaq vdtalrpank etpekvkvnn ifiignektk
       61 ksiilreldf ttdyyydwet fleiiqadqk kiynlrlfts veitplitgd eevevlitvk
      121 erwyilpsli fnladrnfae wwtnqgrdfs rvnyglrlsh nnvagrnekl kfagqlgftk
      181 aldvqyskpy idknqkhgla aqftyynnkt laiksennkq vfytapneev lrknlaaair
      241 ytyrrsfynf hfvtlgfnht winplaleqs pnyfqhgsnt lrylfltysf rhdrrdnisy
      301 atdgellvft atkygvffte eldevevnlt ankyfklsek fhfntgltan wflsasqpyt
      361 lvrgigyspn firgyelnvi egqqlyvhkn sfrwkffdya fdisrtvpld qfntipirfy
      421 lsanfdhgfv kdrnnipsna rlankylmgy glgidmvsfy dsvlrfeysf nntgsgnfff
      481 nfktpf
//
LOCUS       WP_236032794            1024 aa            linear   BCT 02-MAR-2025
DEFINITION  M43 family zinc metalloprotease [Algoriphagus pacificus].
ACCESSION   WP_236032794
VERSION     WP_236032794.1
KEYWORDS    RefSeq.
SOURCE      Algoriphagus pacificus
  ORGANISM  Algoriphagus pacificus
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Algoriphagus.
REFERENCE   1  (residues 1 to 1024)
  AUTHORS   Chen,B.K., Overgaard,M.T., Bale,L.K., Resch,Z.T., Christiansen,M.,
            Oxvig,C. and Conover,C.A.
  TITLE     Molecular regulation of the IGF-binding protein-4 protease system
            in human fibroblasts: identification of a novel inducible inhibitor
  JOURNAL   Endocrinology 143 (4), 1199-1205 (2002)
   PUBMED   11897673
REFERENCE   2  (residues 1 to 1024)
  AUTHORS   Mazerbourg,S., Overgaard,M.T., Oxvig,C., Christiansen,M.,
            Conover,C.A., Laurendeau,I., Vidaud,M., Tosser-Klopp,G., Zapf,J.
            and Monget,P.
  TITLE     Pregnancy-associated plasma protein-A (PAPP-A) in ovine, bovine,
            porcine, and equine ovarian follicles: involvement in IGF binding
            protein-4 proteolytic degradation and mRNA expression during
            follicular development
  JOURNAL   Endocrinology 142 (12), 5243-5253 (2001)
   PUBMED   11713222
REFERENCE   3  (residues 1 to 1024)
  AUTHORS   Chelius,D., Conover,C.A., Baldwin,M.A. and Spencer,E.M.
  TITLE     Characterization of the enzymatic specificity of the IGF-dependent
            insulin-like growth factor binding protein-4 (IGFBP-4) protease
  JOURNAL   Growth Horm IGF Res 10 (6), 360-366 (2000)
   PUBMED   11161967
REFERENCE   4  (residues 1 to 1024)
  AUTHORS   Overgaard,M.T., Haaning,J., Boldt,H.B., Olsen,I.M., Laursen,L.S.,
            Christiansen,M., Gleich,G.J., Sottrup-Jensen,L., Conover,C.A. and
            Oxvig,C.
  TITLE     Expression of recombinant human pregnancy-associated plasma
            protein-A and identification of the proform of eosinophil major
            basic protein as its physiological inhibitor
  JOURNAL   J Biol Chem 275 (40), 31128-31133 (2000)
   PUBMED   10913121
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017393.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05572.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Algoriphagus pacificus"
                     /db_xref="taxon:2811234"
     Protein         1..1024
                     /product="M43 family zinc metalloprotease"
                     /calculated_mol_wt=112257
     Region          99..339
                     /region_name="ZnMc_pappalysin_like"
                     /note="Zinc-dependent metalloprotease, pappalysin_like
                     subfamily. The pregnancy-associated plasma protein A
                     (PAPP-A or pappalysin-1) cleaves insulin-like growth
                     factor-binding proteins 4 and 5, thereby promoting cell
                     growth by releasing bound growth factor; cd04275"
                     /db_xref="CDD:239802"
     Site            order(266..267,270,276)
                     /site_type="active"
                     /db_xref="CDD:239802"
     Region          482..646
                     /region_name="choice_anch_J"
                     /note="choice-of-anchor J domain; NF038128"
                     /db_xref="CDD:468371"
     Region          <816..928
                     /region_name="choice_anch_J"
                     /note="choice-of-anchor J domain; NF038128"
                     /db_xref="CDD:468371"
     Region          948..1023
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     pfam18962"
                     /db_xref="CDD:436869"
ORIGIN      
        1 mkkglrfyqk asllligaif tlsplfsqqf tvvditgqld gnhahngkca htfleakqek
       61 elgyfgtkey fenwidqkie trnsnpqlsa ktnsehrlip vvvhvihngt glgqganvpl
      121 sqiteqiril nedfrrlnad aantpaqflp vaadaniefi lakqdpnglp tdgivriqgp
      181 kssynpetda tiigqtsqwn pseylnlyvv plvspyigya sfpisdlpgl ntpptsaitd
      241 gvvidyrffg vggnavsasl grtathevgh yfglrhiwgd ggcgvddfva dtpeqdssnn
      301 scspnftrss cgsvdmiqny mdytpdacmn lftqgqvdrf nvvlensprr vtlvnnratk
      361 dpelkdrdla iariisptdy acaptvtpri evlnagnntl tsgrvelrrn gvllenkrft
      421 fniqtgqtai ltfddfdlig sgttvefkit qandqadend anniktsmpv lqqeislpyt
      481 vdlntfpglf gienpdesmt weksnltisg vsqpvvsisn ynyeapgeld yfisplinla
      541 qypnaqlvfe vayanydqsg fedqlivavs qdcgnnfnla tatyqkfgpr letsdatlde
      601 fipnsssqfr ielvnlnafk dlgtvrfafi nqnaygnnly irnirilpne efkyeltvee
      661 lisptpivdg tqstervlit ntgnlpvskf lfsrstngsq tqtflasgsa vspgesfsls
      721 gsrttragkn smrlavsepn fdqngdnsse itryviedan miqtpwrqnf nsstsitptn
      781 qtinpesdlt aweiipvtng egpnnvarvq nllpnnsywl gtsifdlsgr rqasvffdla
      841 agavsnsttl svlastngge nydlvyqisg selstvsvge anpnsvddya rkyvnltdfa
      901 gpgntevrla fvisggtstd spiyldniel fqsanpdpvi paegmsvlfp npaqdifnia
      961 fnlaqfeevn iqiissagmv vqdlnfpgtl nqtysfstem fakgvyiiki tsptvretrr
     1021 lmin
//
LOCUS       WP_236032904             144 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6943 family protein [Algoriphagus pacificus].
ACCESSION   WP_236032904
VERSION     WP_236032904.1
KEYWORDS    RefSeq.
SOURCE      Algoriphagus pacificus
  ORGANISM  Algoriphagus pacificus
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Cyclobacteriaceae; Algoriphagus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047099.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22105.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Algoriphagus pacificus"
                     /db_xref="taxon:2811234"
     Protein         1..144
                     /product="DUF6943 family protein"
                     /calculated_mol_wt=16530
ORIGIN      
        1 mksfrikthr lessyqqphf filnkglnsg kplnnacpnc fvcltecdeh reflywlcfg
       61 lwksksfhyl lkgsvipfvt idesrklire sstkascksq afekaiqalq lldtneqkik
      121 vtlkmidtar qaifydlmke adag
//
LOCUS       WP_236033042             361 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Pseudomonas schmalbachii].
ACCESSION   WP_236033042
VERSION     WP_236033042.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas schmalbachii
  ORGANISM  Pseudomonas schmalbachii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 361)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Pseudomonas schmalbachii"
                     /db_xref="taxon:2816993"
     Protein         1..361
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=40169
     Region          <41..360
                     /region_name="PhaC"
                     /note="Poly-beta-hydroxybutyrate synthase [Lipid transport
                     and metabolism]; COG3243"
                     /db_xref="CDD:442475"
ORIGIN      
        1 msslrerkss egslverlrt evsqlvqrsv kgfeylttph pqvgvtprtl lhrrgtlaly
       61 hyhstasevy rvpllmvmal nakasifdla kgqslieyli grgydvyvid wnaptaaesg
      121 lkfedyvldf ipdsvrrvqq dsgcddvsmi gycmggvlst tyaalhpegp lknlvlfttp
      181 tdftkmffhn mldkgsfdig rmigkdglls aaaiekaidl hrpatryasq lrlwdnmwnd
      241 hyvkahrmmi swgsgampfa gaffqqmhke yirkngfieg giriggkpve lknikvpllh
      301 viaqydslvp pecakplveg vgstdkeeli lpgghvslva gpaavkrmwp kldqwlsvrs
      361 v
//
LOCUS       WP_236033045             353 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Pseudomonas schmalbachii].
ACCESSION   WP_236033045
VERSION     WP_236033045.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas schmalbachii
  ORGANISM  Pseudomonas schmalbachii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 353)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Pseudomonas schmalbachii"
                     /db_xref="taxon:2816993"
     Protein         1..353
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=39219
     Region          <32..352
                     /region_name="PhaC"
                     /note="Poly-beta-hydroxybutyrate synthase [Lipid transport
                     and metabolism]; COG3243"
                     /db_xref="CDD:442475"
ORIGIN      
        1 msdtslvkrl rsevnqlvkr slngfeyvtt sgprpgvtpr tllhrrgtls lyryhpsvde
       61 iyrvpvllvt pttnsasifd lakgqslvef llgrgydvyv mdwnaptaae sglriedyvl
      121 dfipdsirri qadtgeqevs ligycmagvl stiyaalhpe gplknlvlft tptdwskvvf
      181 kklaagvqve pqrmvdsngl vpadtitrti dmirpasria ghirlldnlw nddyvhayrl
      241 mmnfgaetip lagayhrqit selmeknslv qgtmriggrq vdlknirvpl lhviaqydhm
      301 vppdcaqplv agvssedkee lmlpgghlsl vtgpsavkrm wpkldqwlgn rsi
//
LOCUS       WP_236033109             706 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein, partial [Helicobacter cinaedi].
ACCESSION   WP_236033109
VERSION     WP_236033109.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter cinaedi
  ORGANISM  Helicobacter cinaedi
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Helicobacter cinaedi"
                     /db_xref="taxon:213"
     Protein         <1..706
                     /product="helicase-related protein"
     Region          15..>645
                     /region_name="COG4889"
                     /note="Predicted helicase [General function prediction
                     only]"
                     /db_xref="CDD:443917"
ORIGIN      
        1 nlkvkdskdy knpkiiifst yqsidviiet qklfnqefkl iindeahrta gvqkldeqwn
       61 akdisvwqkt hdntllkaky rlyltatpri ysskakdelg kkskgkdlll fsmddetlfg
      121 keiyelkfsk aisekllsdf rvvisyiree ylaeylgklt kaqensklti enagkmisfa
      181 nalnkinmsf vdengiheay kddtkpmkka vvyhssirns kfvtekfpki srniilrhid
      241 gthnaykkae qlfwlsdngd ecrvlsnakc ltegidvpsl davcffdkrd smvdivqavg
      301 rairksegkk ygyiilplvl sdeeiknydk tlkgdkfkiv whtlkalrsh derlideari
      361 aeivslltds sgitelpeat lftleelfne mknavpknlg dlqywenyas kvgdimqklm
      421 lriqalldss saiqklfatf ckalqsnlna sfneseaial vaqhiitkpi ftcifpsldf
      481 atfdkvsael eklhsklleq glsaetqtle kfytsaqesa hyarsdkskq nliknlydtl
      541 fkeafkktqe klgivytpie gvdfiihstq yllqkhfgks lgdrhihiad pfvgtgtfit
      601 rliqsgylds nleskftkel waneitllgy yiaqiniatt yherlvalgd sdlgeqcgsv
      661 vdfvkgtnak fanlpqnpqs shsptanlri leeekqagre ntpppp
//
LOCUS       WP_236033119             140 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Helicobacter
            cinaedi].
ACCESSION   WP_236033119
VERSION     WP_236033119.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter cinaedi
  ORGANISM  Helicobacter cinaedi
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 140)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Helicobacter cinaedi"
                     /db_xref="taxon:213"
     Protein         <1..>140
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <2..>140
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
ORIGIN      
        1 gkdlneinrv fesyvsldft tevnnasgrv evvtntlgee irkmlhtssn faqnlseeak
       61 alaeavnnlt nltnsqassl eqtaqaveei tssmqnvsgk tseviqqsed iknvigiird
      121 iadqtnllal naaieaarag
//
LOCUS       WP_236033195             419 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Helicobacter turcicus].
ACCESSION   WP_236033195
VERSION     WP_236033195.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter turcicus
  ORGANISM  Helicobacter turcicus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 419)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 419)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 419)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 419)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Helicobacter turcicus"
                     /db_xref="taxon:2867412"
     Protein         1..419
                     /product="ATP-binding protein"
                     /calculated_mol_wt=48240
     Region          12..407
                     /region_name="ArsS_fam_HK"
                     /note="ArsS family sensor histidine kinase; NF038389"
                     /db_xref="CDD:468500"
ORIGIN      
        1 mrlnlrrwip plyvqiyllf ilslgiggvv tylanlntlk rneeailkqt affaqqslme
       61 lmngdlrrle nvvrefhfki irkippnaqv llenqntfgt mqifkvqqny gfhleylgmn
      121 lvafrdfgie lanngglniw ifldflvlll tfsmilallh plkvlqsgle afgqgnykih
      181 ipvpkepqqa klaesfntmc arisklmlar efvlrnighe lktpiskakl alelmpknpq
      241 kdlvskciyn ldnltsqilt fekiqegkdl lfledfdvet lfiktfeklf ieeenleivl
      301 denfkihgdl qflsialknl idnafkyksg rkivlrayvs hgecriavkn ygealqqeia
      361 fylepfsrdk ahelisgygl glgiikgvle lhhfrleysy ekgvhcfvmv fnreckkgn
//
LOCUS       WP_236033274             420 aa            linear   BCT 02-MAR-2025
DEFINITION  PBECR2 nuclease fold domain-containing protein [Helicobacter
            turcicus].
ACCESSION   WP_236033274
VERSION     WP_236033274.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter turcicus
  ORGANISM  Helicobacter turcicus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 420)
  AUTHORS   Iyer,L.M., Burroughs,A.M., Anand,S., de Souza,R.F. and Aravind,L.
  TITLE     Polyvalent Proteins, a Pervasive Theme in the Intergenomic
            Biological Conflicts of Bacteriophages and Conjugative Elements
  JOURNAL   J Bacteriol 199 (15), e00245-17 (2017)
   PUBMED   28559295
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037113.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18810.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Helicobacter turcicus"
                     /db_xref="taxon:2867412"
     Protein         1..420
                     /product="PBECR2 nuclease fold domain-containing protein"
                     /calculated_mol_wt=47671
     Region          <42..107
                     /region_name="PBECR3"
                     /note="phage-Barnase-EndoU-ColicinE5/D-RelE like
                     nuclease3; cl39013"
                     /db_xref="CDD:476845"
ORIGIN      
        1 msereakdev keylksdihl kigsllkiik kdridiidki kptleepnfv lddnkgilfi
       61 kefididknr yfmsvaknyd gewicsshtk refnniknki qnskiiynkg fqgsevasac
      121 dilesggevs kpshlqikyt anqdfgknps eiisqskahl ktykitlqed stltqqshii
      181 kesqmsneek leifqlgval tqalngdsea iadlnriykr hkemfkdeed vknlieqvia
      241 npeividaqr nesynvykai kaindekmgd vvvkddggin eifhankkki selnrfkkhl
      301 dekdnlvnlv gggdahsphp tdkervwatd tkvcsptndi ipqtqdslkt ykiplqedsn
      361 fkdlstkqkl ellaanqkai aeakspkeii qestkdskql kaskdsnqes kintfkhkgh
//
LOCUS       WP_236033587             360 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-grasp fold amidoligase family protein, partial [Helicobacter
            cinaedi].
ACCESSION   WP_236033587
VERSION     WP_236033587.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter cinaedi
  ORGANISM  Helicobacter cinaedi
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 360)
  AUTHORS   Iyer,L.M., Abhiman,S., Maxwell Burroughs,A. and Aravind,L.
  TITLE     Amidoligases with ATP-grasp, glutamine synthetase-like and
            acetyltransferase-like domains: synthesis of novel metabolites and
            peptide modifications of proteins
  JOURNAL   Mol Biosyst 5 (12), 1636-1660 (2009)
   PUBMED   20023723
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025663.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14305.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Helicobacter cinaedi"
                     /db_xref="taxon:213"
     Protein         <1..360
                     /product="ATP-grasp fold amidoligase family protein"
     Region          155..360
                     /region_name="CPSase_L_D2"
                     /note="Carbamoyl-phosphate synthase L chain, ATP binding
                     domain; cl17255"
                     /db_xref="CDD:473076"
ORIGIN      
        1 gggqpyslnq nnidlqndpt lntttsispq tqnkecynpn qnntessnkt sqatqykene
       61 ninstsicha eplgevsktl eskqdsskdi sclhtqydki lettqntpen pipnqatqil
      121 nsllakdsll fqpidtltqe lfntnecqyl pklygiyksv deidfsklpq sfvlktnhds
      181 ggvvlvkdkv aflkdsksfn eamtkltthl ntnfytlyre whykdiepri fveemlletn
      241 adgeakvpsd ykihcfgktq yiqvdtdrfv ehtrsifden wnvmpikyly qppniipnkp
      301 ehlnimleia rmlimspylr vdlyniqgri vvgeltftpe sgtgrftpqe wdkkfgdmwk
//
LOCUS       WP_236033858             447 aa            linear   BCT 02-MAR-2025
DEFINITION  MATE family efflux transporter [Belnapia mucosa].
ACCESSION   WP_236033858
VERSION     WP_236033858.1
KEYWORDS    RefSeq.
SOURCE      Belnapia mucosa
  ORGANISM  Belnapia mucosa
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Belnapia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01554.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Belnapia mucosa"
                     /db_xref="taxon:2804532"
     Protein         1..447
                     /product="MATE family efflux transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44588
     Region          23..441
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 madgtmalap psqgvllrrv walaapttav aalqaaaqlv epwlaarqgt aalagwavvl
       61 pfallmqqms tgamgggvvs aiartlgagk reeastlvah alvialgfgl lfalllagfp
      121 rtilgaigga eaaeaaapyc awlfgagavp awmantlasv lrgggrhala srvlllgwvf
      181 ypplawvlme wlelglagag mafaatmtaa slgmaavvlt ggagfrpslr vrlqgalfar
      241 ilsvglvaca matvanlati lvtarvaayg atavaaygvs arieflmvpl afgvgsalta
      301 lvgrsvgagd wvtarrtawa gawmalgvtl vvgvfvsaap gftaaafsqd pavvaiatqa
      361 lavigfalpg fgvgmalyfa smgagrmagp vlaalsrigl avgggwllsd vmgfglqgqf
      421 vavalgisay glitalsvrp gvwsarg
//
LOCUS       WP_236033994             229 aa            linear   BCT 02-MAR-2025
DEFINITION  DapH/DapD/GlmU-related protein [Belnapia mucosa].
ACCESSION   WP_236033994
VERSION     WP_236033994.1
KEYWORDS    RefSeq.
SOURCE      Belnapia mucosa
  ORGANISM  Belnapia mucosa
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Belnapia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025953.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14602.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Belnapia mucosa"
                     /db_xref="taxon:2804532"
     Protein         1..229
                     /product="DapH/DapD/GlmU-related protein"
                     /calculated_mol_wt=24845
     Region          12..208
                     /region_name="LbetaH"
                     /note="Left-handed parallel beta-Helix (LbetaH or LbH)
                     domain: The alignment contains 5 turns, each containing
                     three imperfect tandem repeats of a hexapeptide repeat
                     motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing
                     hexapeptide repeats are often enzymes...; cl00160"
                     /db_xref="CDD:469633"
     Site            order(46,48,65,77..78,83,85,87,118,120,123,142,158,166)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:100040"
     Site            order(48,50,76..77,79,88..89,120,123,140..141,146,154,
                     156..157,159,163)
                     /site_type="active"
                     /db_xref="CDD:100040"
     Site            order(48,50,76,88..89)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:100040"
     Site            order(77,79,110,120,123,128,140..141,146,154,156..157,159,
                     163)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:100040"
ORIGIN      
        1 msqarqgpki aetridpdvs lrdtvigrcc eilggtamey aelgdysyig rgctvadati
       61 grfcaiaanv rigapnhpmd rpslhrftyc peyydagaer dhgffqdrra drvqighdvw
      121 ighgvtvlpg vcvgngavla agavvtrdva pytvvggvpa rpirdrfpps iaerlnriaw
      181 wdwpfalimq rladfqstei eafcdrweaa agadpsheps vadcktgqa
//
LOCUS       WP_236034021             448 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Belnapia mucosa].
ACCESSION   WP_236034021
VERSION     WP_236034021.1
KEYWORDS    RefSeq.
SOURCE      Belnapia mucosa
  ORGANISM  Belnapia mucosa
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Belnapia.
REFERENCE   1  (residues 1 to 448)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 448)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 448)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 448)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Belnapia mucosa"
                     /db_xref="taxon:2804532"
     Protein         1..448
                     /product="ATP-binding protein"
                     /calculated_mol_wt=48506
     Region          <164..447
                     /region_name="envZ"
                     /note="osmolarity sensor protein; Provisional; PRK09467"
                     /db_xref="CDD:236531"
ORIGIN      
        1 mkgwrawprs lagrtalvll laltavqaag ltihaldrvd lqrfsqarei saraisawrt
       61 vilapaerrg qmlaelelpa gltatlddlp marldqppvp ppiarmlrld llgggpprfr
      121 preiitsweq rapvfraslr lptgewlnlr ielppprpwh setfliafla mtlaacllil
      181 wavrrltrpv rtlaeaaerl grdvnappmp etgpsevata arafntmaer irrfvgdrtq
      241 mlaaighdlr tpitrlrlra efmdddeqrr kmladleeme amvaatlafa rddaaaeptv
      301 pldlaalcrt vldeaadarp dlaaaigyqg pehlvvparp valkralanl vgnalaygga
      361 arlalsppea agrpvrlaie dagpgippee leavfqpfrr leasrnretg gtglglpiar
      421 nilrahggdv vlqnragggl valatlpa
//
LOCUS       WP_236034100             157 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Belnapia mucosa].
ACCESSION   WP_236034100
VERSION     WP_236034100.1
KEYWORDS    RefSeq.
SOURCE      Belnapia mucosa
  ORGANISM  Belnapia mucosa
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Belnapia.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Belnapia mucosa"
                     /db_xref="taxon:2804532"
     Protein         1..157
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=16400
     Region          31..142
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(123..126,128)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 mtamltandn qaglqhqvmp qrrttlrdrr vlivedeall tmlledglse agaevvgsag
       61 tvfealqiie rvaqdgglda avldinlage svtpvanqla algvpflfat gygtdcdmga
      121 haaapvlhkp faterlvavl eaivsftpdg agafwrd
//
LOCUS       WP_236034177             193 aa            linear   BCT 02-MAR-2025
DEFINITION  GIY-YIG nuclease family protein [Leclercia adecarboxylata].
ACCESSION   WP_236034177
VERSION     WP_236034177.1
KEYWORDS    RefSeq.
SOURCE      Leclercia adecarboxylata
  ORGANISM  Leclercia adecarboxylata
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Leclercia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF044913.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20815.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Leclercia adecarboxylata"
                     /db_xref="taxon:83655"
     Protein         1..193
                     /product="GIY-YIG nuclease family protein"
                     /calculated_mol_wt=21646
ORIGIN      
        1 msqptlvtai ngvyfwwfke ippgvptedc ltqdgytlly vgispdkkgk pnsranlktr
       61 ikthysgnae gstlrrslgv llalesnypl rrvgsgkrtt fthlgeqwld qwmeenakvy
      121 wvaheepwll eeiligsisl plniqgnnhp fkptlsamrs kamkeakime iadetgfsrs
      181 kvaeiieqat qvk
//
LOCUS       WP_236034227             320 aa            linear   BCT 02-MAR-2025
DEFINITION  LLM class flavin-dependent oxidoreductase [Belnapia mucosa].
ACCESSION   WP_236034227
VERSION     WP_236034227.1
KEYWORDS    RefSeq.
SOURCE      Belnapia mucosa
  ORGANISM  Belnapia mucosa
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Belnapia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012517.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00296.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Belnapia mucosa"
                     /db_xref="taxon:2804532"
     Protein         1..320
                     /product="LLM class flavin-dependent oxidoreductase"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /calculated_mol_wt=35099
     Region          28..245
                     /region_name="Flavin_utilizing_monoxygenases"
                     /note="Flavin-utilizing monoxygenases; cl19096"
                     /db_xref="CDD:450250"
ORIGIN      
        1 mvqptgrplk vglvlplehd hgrtkarwrd ikalaqhaea agfdslwlpd hlvydfaqmg
       61 gipdvppwgv weawsilssv aavterveig plvsctsfrn pallakmadt vdeisngrlv
      121 lglgagyhei efrqfgypld hlvgrfdeal qiihallrtg kvdfegayys trecellprg
      181 prrtgppilm gakaprtrrl aaqyadywng lrvdapekvv pmreamddac ikagrdpksl
      241 lrtmlllfdl pgayggeape ghrafrtalg aspagtaeal aeklrafare gishvqiwle
      301 pntratvdam vpvlelldra
//
LOCUS       WP_236034324             237 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase domain-containing protein [Bifidobacterium
            saguinibicoloris].
ACCESSION   WP_236034324
VERSION     WP_236034324.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium saguinibicoloris
  ORGANISM  Bifidobacterium saguinibicoloris
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019846.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08241.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Bifidobacterium saguinibicoloris"
                     /db_xref="taxon:2834433"
     Protein         1..237
                     /product="methyltransferase domain-containing protein"
                     /GO_function="GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /calculated_mol_wt=26457
     Region          9..222
                     /region_name="PRK01683"
                     /note="trans-aconitate 2-methyltransferase; Provisional"
                     /db_xref="CDD:234970"
ORIGIN      
        1 mqlppddgsv trlidigcgp gnstavlrgr yphaeilgvd sspemvsaar eahpdidfal
       61 cdvskpdela aleqdfdvvf snaciqwvpd harliplllg llklsgtlav qtpmnyeepi
      121 hriigelvhs payadklpqa reffnltppe ywellhthaa rfrmwtttyl htlpsheaim
      181 dwyrgtglrp ylqalpgaaa raafedevfn rvreayptqs dgsiifpfpr ffftavr
//
LOCUS       WP_236034377             385 aa            linear   BCT 02-MAR-2025
DEFINITION  metal ABC transporter solute-binding protein, Zn/Mn family
            [Bifidobacterium saguinibicoloris].
ACCESSION   WP_236034377
VERSION     WP_236034377.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium saguinibicoloris
  ORGANISM  Bifidobacterium saguinibicoloris
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 385)
  AUTHORS   Ilari,A., Alaleona,F., Tria,G., Petrarca,P., Battistoni,A.,
            Zamparelli,C., Verzili,D., Falconi,M. and Chiancone,E.
  TITLE     The Salmonella enterica ZinT structure, zinc affinity and
            interaction with the high-affinity uptake protein ZnuA provide
            insight into the management of periplasmic zinc
  JOURNAL   Biochim Biophys Acta 1840 (1), 535-544 (2014)
   PUBMED   24128931
REFERENCE   2  (residues 1 to 385)
  AUTHORS   Gabbianelli,R., Scotti,R., Ammendola,S., Petrarca,P., Nicolini,L.
            and Battistoni,A.
  TITLE     Role of ZnuABC and ZinT in Escherichia coli O157:H7 zinc
            acquisition and interaction with epithelial cells
  JOURNAL   BMC Microbiol 11, 36 (2011)
   PUBMED   21338480
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 385)
  AUTHORS   Lee,Y.H., Deka,R.K., Norgard,M.V., Radolf,J.D. and Hasemann,C.A.
  TITLE     Treponema pallidum TroA is a periplasmic zinc-binding protein with
            a helical backbone
  JOURNAL   Nat Struct Biol 6 (7), 628-633 (1999)
   PUBMED   10404217
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013465.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01297.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Bifidobacterium saguinibicoloris"
                     /db_xref="taxon:2834433"
     Protein         1..385
                     /product="metal ABC transporter solute-binding protein,
                     Zn/Mn family"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=39892
     Region          49..308
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(116..117,120,158)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238347"
ORIGIN      
        1 mdgrlhtgig raarrgaall lsavmafava acgagtsgdt gddvaaktga idvvasvnqw
       61 gslaaeiggk dvkvtsilss tgvdahdfep ktsdlatlsk aevvvangag ydswatktrg
      121 pdstlvsaaq ivgamdgdnp hlwfskdark gmakelanaf skarpkkrka fetrlkawqk
      181 rektldqamd dfssrhkdls ygateavvyy lmsdmsfedr tpkayaqava nggeiapadl
      241 qtfqsliedh gmdvlvnnsq easdatnmlv gtagrsdvpv vdvseqmpak ydtltdwigk
      301 lveelftavd pdydvddpdg taqdgddadt ggndgttqde stesdgtdgs tadadgsgcs
      361 ngdgtgdcta tgddgsnagq tdpgk
//
LOCUS       WP_236034547             283 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Bifidobacterium saguinibicoloris].
ACCESSION   WP_236034547
VERSION     WP_236034547.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium saguinibicoloris
  ORGANISM  Bifidobacterium saguinibicoloris
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Bifidobacterium saguinibicoloris"
                     /db_xref="taxon:2834433"
     Protein         1..283
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=30186
     Region          23..282
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(37,39..40,42,61,64..65,117..119,168..170,189,193,
                     219..222)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187610"
     Site            order(141,170,189,193)
                     /site_type="active"
                     /db_xref="CDD:187610"
ORIGIN      
        1 mtdatifdqy pldqwkepdh rimdrfslkg kkgfvtggag glgrnvaaaw aeagadvaiv
       61 dlprtketle plaaelsery dvnvvplycd vsdkeqvdal ktslvetlgt vdvaflnagv
      121 nvpgddadep yevwkktidi nltgayltaq iaqhimrehg hggslvftss lsahnanfig
      181 ggpspvaayg askagiheya rylaaalapy girsntvspg yvwsgifegr ivpeahdmmv
      241 spvpmhrfgt neeiatavlf lasdtssyvt gtnlqvdggy svy
//
LOCUS       WP_236034597             229 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein, partial
            [Bifidobacterium saguinibicoloris].
ACCESSION   WP_236034597
VERSION     WP_236034597.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium saguinibicoloris
  ORGANISM  Bifidobacterium saguinibicoloris
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024908.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13518.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Bifidobacterium saguinibicoloris"
                     /db_xref="taxon:2834433"
     Protein         <1..229
                     /product="helix-turn-helix domain-containing protein"
     Region          137..>189
                     /region_name="transpos_IS630"
                     /note="IS630 family transposase; NF033545"
                     /db_xref="CDD:468076"
ORIGIN      
        1 evvpfswtvi reepivaryt reqrrravel yvqyeccaad virelgypsr valrmwhrdw
       61 leeretgvps rrgeryaryt qerkraavdh ylthgrrasr tmrrmgypsk evlaawidgl
      121 argerrirrg pvpetlkrea vlrvasgess sreaaravgv dssvvrnwkr qllggskglm
      181 vakrepggga giprrrtirt rcaarsprca ptssvcapns gpwrsdwrs
//
LOCUS       WP_236034605             117 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Helicobacter
            cinaedi].
ACCESSION   WP_236034605
VERSION     WP_236034605.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter cinaedi
  ORGANISM  Helicobacter cinaedi
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 117)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Helicobacter cinaedi"
                     /db_xref="taxon:213"
     Protein         <1..>117
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          6..>117
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
ORIGIN      
        1 tntlgeeirk mlhtssnfaq nlseeakala eavnnltnlt nsqassleqt aqaveeitss
       61 mqnvsgktse viqqsedikn vigiirdiad qtnllalnaa ieaaragehg rgfavva
//
LOCUS       WP_236034035             234 aa            linear   BCT 02-MAR-2025
DEFINITION  TylF/MycF/NovP-related O-methyltransferase, partial [Helicobacter
            cinaedi].
ACCESSION   WP_236034035
VERSION     WP_236034035.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter cinaedi
  ORGANISM  Helicobacter cinaedi
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 234)
  AUTHORS   Gomez Garcia,I., Stevenson,C.E., Uson,I., Freel Meyers,C.L.,
            Walsh,C.T. and Lawson,D.M.
  TITLE     The crystal structure of the novobiocin biosynthetic enzyme NovP:
            the first representative structure for the TylF O-methyltransferase
            superfamily
  JOURNAL   J Mol Biol 395 (2), 390-407 (2010)
   PUBMED   19857499
REFERENCE   2  (residues 1 to 234)
  AUTHORS   Fouces,R., Mellado,E., Diez,B. and Barredo,J.L.
  TITLE     The tylosin biosynthetic cluster from Streptomyces fradiae: genetic
            organization of the left region
  JOURNAL   Microbiology (Reading) 145 (Pt 4), 855-868 (1999)
   PUBMED   10220165
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017522.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05711.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Helicobacter cinaedi"
                     /db_xref="taxon:213"
     Protein         <1..234
                     /product="TylF/MycF/NovP-related O-methyltransferase"
                     /EC_number="2.1.1.-"
     Region          <51..213
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
ORIGIN      
        1 siysspklle ldfdkvivgt ftglyeiseq lesmgipkak idvgyielsv karivflqdf
       61 akisqhlegs vaelgvyrgd faryinesfr dktlylfdtf egfthsdvsk dstmahslga
      121 khfantsvel vlskmpyker cvikkgwfpq savglenerf cfvnldcdly epilaglryf
      181 ypkmvkggvi lcheyfsqgy vgvreavmef iaessdeiyt lpighnlsia likt
//
LOCUS       WP_236034214             245 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma-E factor regulatory protein RseB domain-containing protein
            [Leclercia adecarboxylata].
ACCESSION   WP_236034214
VERSION     WP_236034214.1
KEYWORDS    RefSeq.
SOURCE      Leclercia adecarboxylata
  ORGANISM  Leclercia adecarboxylata
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Leclercia.
REFERENCE   1  (residues 1 to 245)
  AUTHORS   Kim,D.Y., Jin,K.S., Kwon,E., Ree,M. and Kim,K.K.
  TITLE     Crystal structure of RseB and a model of its binding mode to RseA
  JOURNAL   Proc Natl Acad Sci U S A 104 (21), 8779-8784 (2007)
   PUBMED   17496148
REFERENCE   2  (residues 1 to 245)
  AUTHORS   Martinez-Salazar,J.M., Moreno,S., Najera,R., Boucher,J.C.,
            Espin,G., Soberon-Chavez,G. and Deretic,V.
  TITLE     Characterization of the genes coding for the putative sigma factor
            AlgU and its regulators MucA, MucB, MucC, and MucD in Azotobacter
            vinelandii and evaluation of their roles in alginate biosynthesis
  JOURNAL   J Bacteriol 178 (7), 1800-1808 (1996)
   PUBMED   8606151
REFERENCE   3  (residues 1 to 245)
  AUTHORS   Martin,D.W., Schurr,M.J., Mudd,M.H. and Deretic,V.
  TITLE     Differentiation of Pseudomonas aeruginosa into the
            alginate-producing form: inactivation of mucB causes conversion to
            mucoidy
  JOURNAL   Mol Microbiol 9 (3), 497-506 (1993)
   PUBMED   8412698
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015825.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03888.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Leclercia adecarboxylata"
                     /db_xref="taxon:83655"
     Protein         1..245
                     /product="sigma-E factor regulatory protein RseB
                     domain-containing protein"
                     /calculated_mol_wt=26535
     Region          15..243
                     /region_name="LolA"
                     /note="Outer membrane lipoprotein-sorting protein [Cell
                     wall/membrane/envelope biogenesis]; COG2834"
                     /db_xref="CDD:442082"
     Region          <153..235
                     /region_name="LolA_fold-like"
                     /note="family containing periplasmic molecular chaperone
                     LolA, the outer membrane lipoprotein receptor LolB and the
                     periplasmic protein RseB; cl19192"
                     /db_xref="CDD:473147"
ORIGIN      
        1 mfpvmllqet iisgflsvav mlatllllsf hepahaadqi avaaaflqss tpsdplanal
       61 qrfariasyq vmvrsvssqd etkvirysyr kpgyvrmdfs tphagavliy npsngkvtlw
      121 pfgagtfpvl klsptdslit denghrvdqs digvllnnir rlqqggatrl pgeemiagkp
      181 avhlsvvgae gksvaavhry evwfdkqsgl ptkvvsygld gklletvmme amsinvrfpa
      241 dffap
//
LOCUS       WP_236034945              74 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleoside hydrolase [Alkalihalobacterium elongatum].
ACCESSION   WP_236034945
VERSION     WP_236034945.1
KEYWORDS    RefSeq.
SOURCE      Alkalihalobacterium elongatum
  ORGANISM  Alkalihalobacterium elongatum
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Alkalihalobacterium.
REFERENCE   1  (residues 1 to 74)
  AUTHORS   Degano,M., Gopaul,D.N., Scapin,G., Schramm,V.L. and
            Sacchettini,J.C.
  TITLE     Three-dimensional structure of the inosine-uridine nucleoside
            N-ribohydrolase from Crithidia fasciculata
  JOURNAL   Biochemistry 35 (19), 5971-5981 (1996)
   PUBMED   8634238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01156.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Alkalihalobacterium elongatum"
                     /db_xref="taxon:2675466"
     Protein         1..74
                     /product="nucleoside hydrolase"
                     /GO_function="GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA]"
                     /calculated_mol_wt=7974
     Region          1..>73
                     /region_name="URH1"
                     /note="Inosine-uridine nucleoside N-ribohydrolase
                     [Nucleotide transport and metabolism]; COG1957"
                     /db_xref="CDD:441560"
ORIGIN      
        1 mrepsikvea itvvagnvti dlaaknaris ieksntytpp vykgvgkpfm relftskyvh
       61 gkdgmgdlnl pepl
//
LOCUS       WP_236035050             274 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein
            [Alkalihalobacterium elongatum].
ACCESSION   WP_236035050
VERSION     WP_236035050.1
KEYWORDS    RefSeq.
SOURCE      Alkalihalobacterium elongatum
  ORGANISM  Alkalihalobacterium elongatum
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Alkalihalobacterium.
REFERENCE   1  (residues 1 to 274)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Alkalihalobacterium elongatum"
                     /db_xref="taxon:2675466"
     Protein         1..274
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=29623
     Region          61..272
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mkklerkrss kmkkwmggiv asalllgmaa cgtadetqgd agsdgvaqeg lqeisvavvq
       61 dyppfeyivd gnltgfdidi ieaiaaeenl kvnweimrfd giipalqanq vdaavsaiti
      121 redraevvdf sqpyfesgls lvvpvdsdin siedlegaqi vgkqgtsgle karefaeqyn
      181 gdvtvlqeda tmymeilsgn adalvndyps vaykittdgd dtqlrivger ltgedygiav
      241 skgadgllek mdnglstime ngkyeeiynq yfge
//
LOCUS       WP_236035064             287 aa            linear   BCT 02-MAR-2025
DEFINITION  ion transporter [Alkalihalobacterium elongatum].
ACCESSION   WP_236035064
VERSION     WP_236035064.1
KEYWORDS    RefSeq.
SOURCE      Alkalihalobacterium elongatum
  ORGANISM  Alkalihalobacterium elongatum
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Alkalihalobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012730.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00520.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Alkalihalobacterium elongatum"
                     /db_xref="taxon:2675466"
     Protein         1..287
                     /product="ion transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0006811 - monoatomic ion transport
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=33250
     Region          36..247
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          <255..>284
                     /region_name="DivIVA"
                     /note="DivIVA protein; pfam05103"
                     /db_xref="CDD:428304"
ORIGIN      
        1 mdrkeswlik melknneevn rhnrslretf rqlvehkyfq pivigiilln gliivtetyl
       61 tgnslliaid kiivwifvie liikliglgf rgyfldrwni fdfsivvasl vfystpfvsv
      121 lrlirvlrli rmipaipalr kiidslmksi paltgilgls illfsiyaii gttffsdvlp
      181 yeffgsfhta lftlmqvvtf eswasqvarp iinevpwawv yfvsfiiiga lvilnlvvav
      241 ilsylgqddd akreeqmerl ykenqelkqd iqeikemlme rnnrvnq
//
LOCUS       WP_236035290             275 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6179 domain-containing protein [Clostridium sp. HV4-5-A1G].
ACCESSION   WP_236035290
VERSION     WP_236035290.1
KEYWORDS    RefSeq.
SOURCE      Clostridium sp. HV4-5-A1G
  ORGANISM  Clostridium sp. HV4-5-A1G
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (residues 1 to 275)
  AUTHORS   Yang,J., Zhu,X., Cao,M., Wang,C., Zhang,C., Lu,Z. and Lu,F.
  TITLE     Genomics-Inspired Discovery of Three Antibacterial Active
            Metabolites, Aurantinins B, C, and D from Compost-Associated
            Bacillus subtilis fmb60
  JOURNAL   J Agric Food Chem 64 (46), 8811-8820 (2016)
   PUBMED   27806569
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040016.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19677.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Clostridium sp. HV4-5-A1G"
                     /db_xref="taxon:2004595"
     Protein         1..275
                     /product="DUF6179 domain-containing protein"
                     /calculated_mol_wt=31865
     Region          8..>201
                     /region_name="DUF6179"
                     /note="Family of unknown function (DUF6179); pfam19677"
                     /db_xref="CDD:466142"
ORIGIN      
        1 megdimsifq nlivkytrgk gssikedtaf rilgsiyyav nacvqnqqds srsfliskgn
       61 ileiykkgie ilketfcqce klyeeikenr lrvpvkmynd tidaalpdff knydiifgaq
      121 dtyssmdypl vfddmnikgi fyikqylekl kvetefcnff kessileilk gygekykidi
      181 sqspisvfqi lieqcafltl cevfeslddt flallgktvf yddlacssfk lthdqlincr
      241 gnmerewqny yvnfllgqse kriknigkti ihiyg
//
LOCUS       WP_236035291             387 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleoside recognition domain-containing protein
            [Alkalihalobacterium elongatum].
ACCESSION   WP_236035291
VERSION     WP_236035291.1
KEYWORDS    RefSeq.
SOURCE      Alkalihalobacterium elongatum
  ORGANISM  Alkalihalobacterium elongatum
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Alkalihalobacterium.
REFERENCE   1  (residues 1 to 387)
  AUTHORS   Hantke,K.
  TITLE     Is the bacterial ferrous iron transporter FeoB a living fossil?
  JOURNAL   Trends Microbiol 11 (5), 192-195 (2003)
   PUBMED   12781516
REFERENCE   2  (residues 1 to 387)
  AUTHORS   Loewen,S.K., Ng,A.M., Yao,S.Y., Cass,C.E., Baldwin,S.A. and
            Young,J.D.
  TITLE     Identification of amino acid residues responsible for the
            pyrimidine and purine nucleoside specificities of human
            concentrative Na(+) nucleoside cotransporters hCNT1 and hCNT2
  JOURNAL   J Biol Chem 274 (35), 24475-24484 (1999)
   PUBMED   10455109
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019292.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07670.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Alkalihalobacterium elongatum"
                     /db_xref="taxon:2675466"
     Protein         1..387
                     /product="nucleoside recognition domain-containing
                     protein"
                     /calculated_mol_wt=42447
     Region          <21..352
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 mseirketas yslnkktykf pkfpfsngkl llylflvisv ygfpvyaaym lasaieplfe
       61 gliieplerl fshtpylieq vlvgdfglft lgvysflwaf pvvlfvgmsi afteevglkd
      121 kitseitpsl rkiglsgrdf ipvltgygcn vvavlqtksc sactrkqcvs misygsacsy
      181 qigatlsifs vggkpwlfvp yliiliivga ihtrlwypsd nkatdyfypa tpistgnlkq
      241 ffgkikgtvs qfflqampif lviciiasll dglgliakls qmvepilsll sipaaasvgl
      301 lfsiirkdgm llfnqgggel lasittvelf llvylastls aclvtmwaig kemgfryalk
      361 haskqgitsi isafsllily kaiifff
//
LOCUS       WP_236035314             305 aa            linear   BCT 02-MAR-2025
DEFINITION  proline dehydrogenase family protein [Alkalihalobacterium
            elongatum].
ACCESSION   WP_236035314
VERSION     WP_236035314.1
KEYWORDS    RefSeq.
SOURCE      Alkalihalobacterium elongatum
  ORGANISM  Alkalihalobacterium elongatum
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Alkalihalobacterium.
REFERENCE   1  (residues 1 to 305)
  AUTHORS   Ling,M., Allen,S.W. and Wood,J.M.
  TITLE     Sequence analysis identifies the proline dehydrogenase and delta
            1-pyrroline-5-carboxylate dehydrogenase domains of the
            multifunctional Escherichia coli PutA protein
  JOURNAL   J Mol Biol 243 (5), 950-956 (1994)
   PUBMED   7966312
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013761.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01619.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Alkalihalobacterium elongatum"
                     /db_xref="taxon:2675466"
     Protein         1..305
                     /product="proline dehydrogenase family protein"
                     /calculated_mol_wt=34860
     Region          13..>277
                     /region_name="PutA"
                     /note="Proline dehydrogenase [Amino acid transport and
                     metabolism]; COG0506"
                     /db_xref="CDD:440272"
ORIGIN      
        1 mvldqpmrlf fmylsknksm nkaakqwglk fgasqvvagk siesaiekvk elnnkglvct
       61 ldhlgefvdn reealeatey ciktldaiaa sgancnlslk mtqlgldicd efclenmrri
      121 vktaknynnf vridmedysh cqqtldilat lrqefdnvgt viqaylfrad qdianlkgvs
      181 lrlvkgayke sadvayqdkk qvdenyltii kkhlqsgsyt aiathdhqii deikkftken
      241 nipksqfefq mlygfrtnlq lelvkegytt rvyvpfgqdw fgyfmrrmae rpqnvsfalr
      301 glisk
//
LOCUS       WP_236035908             461 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Rhizorhabdus
            histidinilytica].
ACCESSION   WP_236035908
VERSION     WP_236035908.1
KEYWORDS    RefSeq.
SOURCE      Rhizorhabdus histidinilytica
  ORGANISM  Rhizorhabdus histidinilytica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Rhizorhabdaceae; Rhizorhabdus.
REFERENCE   1  (residues 1 to 461)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Rhizorhabdus histidinilytica"
                     /db_xref="taxon:439228"
     Protein         1..461
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=48179
     Region          23..448
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mkkisllala asaalsspll aqakpeetaa lrdaaltdtv awditegltt eigprlagsd
       61 aearardwav arlkalgfsn vriepfevpy wergeasaai vapypqplvl aalgnsaatp
      121 akgltaevig fdsldslkaa dpaavkgkiv flthrmavtq dgshygtvgk vrregpsvas
      181 klgaaailir sigtdhhrap htgsqswsdg aqpipalala npdadqlerv lkrgkpvtva
      241 lkatarmagk rlsgnviaev pgrdpdagiv lvgghldswd qgtgaiddaa gvaittaaak
      301 rimdagqplr tirvvwfgse eiglfggaay rekhkgekhh llaesdfgad riwrfqtsva
      361 eaalpamkpl aaalaplgiq laprngdasg sdiseiqklg ipvielgqdg tryfdlhhtp
      421 ddtldkvdpv qlrqnvaawt allsvtandp tdygpvppga h
//
LOCUS       WP_236036039              70 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Rhizorhabdus
            histidinilytica].
ACCESSION   WP_236036039
VERSION     WP_236036039.1
KEYWORDS    RefSeq.
SOURCE      Rhizorhabdus histidinilytica
  ORGANISM  Rhizorhabdus histidinilytica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Rhizorhabdaceae; Rhizorhabdus.
REFERENCE   1  (residues 1 to 70)
  AUTHORS   Ren,J., Sainsbury,S., Nettleship,J.E., Saunders,N.J. and Owens,R.J.
  TITLE     The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals
            a novel protein fold incorporating a helix-turn-helix motif
  JOURNAL   Proteins 78 (7), 1798-1802 (2010)
   PUBMED   20196080
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013540.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01381.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Rhizorhabdus histidinilytica"
                     /db_xref="taxon:439228"
     Protein         1..70
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=7144
     Region          <2..>30
                     /region_name="aMBF1"
                     /note="Archaeal ribosome-binding protein aMBF1, putative
                     translation factor, contains Zn-ribbon and HTH domains
                     [Translation, ribosomal structure and biogenesis];
                     COG1813"
                     /db_xref="CDD:441418"
ORIGIN      
        1 maraalgwsi dklaeaadmr aatissferg gecyrstvek vqasleaagi vfvndgeasl
       61 gggagvrlre
//
LOCUS       WP_236036185             243 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6629 family protein [Rhizorhabdus histidinilytica].
ACCESSION   WP_236036185
VERSION     WP_236036185.1
KEYWORDS    RefSeq.
SOURCE      Rhizorhabdus histidinilytica
  ORGANISM  Rhizorhabdus histidinilytica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Rhizorhabdaceae; Rhizorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042673.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20334.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Rhizorhabdus histidinilytica"
                     /db_xref="taxon:439228"
     Protein         1..243
                     /product="DUF6629 family protein"
                     /calculated_mol_wt=26516
     Region          1..208
                     /region_name="DUF6629"
                     /note="Family of unknown function (DUF6629); pfam20334"
                     /db_xref="CDD:466484"
ORIGIN      
        1 mcfsatssfv aagvigaigv atlrhvrepr allfasvpml falhqfsegf vwlgldgrig
       61 kmaldhlafl fmlyaqgilp llmpaavalm eppgwrrgai lgltvigalv cvwdvyglis
      121 lpshvfvehh siayrnqltg nfgisclyil atcgalllss hrvvrgygvl nvigltivqi
      181 vkeyafasvw cfyaailsvi iywhfnrrni digtpngasd dvkpllfpwl rprtavvank
      241 ldf
//
LOCUS       WP_236036187              77 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6118 family protein [Rhizorhabdus histidinilytica].
ACCESSION   WP_236036187
VERSION     WP_236036187.1
KEYWORDS    RefSeq.
SOURCE      Rhizorhabdus histidinilytica
  ORGANISM  Rhizorhabdus histidinilytica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Rhizorhabdaceae; Rhizorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039997.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19613.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Rhizorhabdus histidinilytica"
                     /db_xref="taxon:439228"
     Protein         1..77
                     /product="DUF6118 family protein"
                     /calculated_mol_wt=8619
     Region          <11..73
                     /region_name="DUF6118"
                     /note="Family of unknown function (DUF6118); pfam19613"
                     /db_xref="CDD:437445"
ORIGIN      
        1 mtpqswqwpe rvarrtmgep tlwdagirlm ragnpegwqa ivdaadmrqa nrdtiaacer
       61 aaekakepvr ctirigr
//
LOCUS       WP_236036208             412 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Rhizorhabdus histidinilytica].
ACCESSION   WP_236036208
VERSION     WP_236036208.1
KEYWORDS    RefSeq.
SOURCE      Rhizorhabdus histidinilytica
  ORGANISM  Rhizorhabdus histidinilytica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Rhizorhabdaceae; Rhizorhabdus.
REFERENCE   1  (residues 1 to 412)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 412)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Rhizorhabdus histidinilytica"
                     /db_xref="taxon:439228"
     Protein         1..412
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=43765
     Region          66..>278
                     /region_name="XerC"
                     /note="Site-specific recombinase XerC [Replication,
                     recombination and repair]; COG4973"
                     /db_xref="CDD:443998"
     Region          186..394
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(201,215..216,309,311,344,379)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:271180"
     Site            order(215,344,347,370,379)
                     /site_type="active"
                     /db_xref="CDD:271180"
ORIGIN      
        1 mvnsslfksr fsprksdvep gvdpaaaqap paplammlrl hgglidgsra rqlaleaaag
       61 amapatkaav ladlrcffsw cgrqkpplqa vpatpdtlvh ylrwlgtakr kpakaatlar
      121 rlasisrmhr ilgfgesepl ptqagmvrdt lkalrrskra pqrqaaplry gaamsaaesa
      181 ptgvtlrall escgedwlgl rdaallslay daglrvselv gatvvdvrrk pdrtgrltir
      241 hsktdqdgkg alawlspdtm arlsawlhas dlhdgplfrr ihvltrdaag egqpsvrhyv
      301 gakaltrqgv vailrrrvlh aidaglidle pgvegrtlas lsahsfrvgl tqdlfaaged
      361 gagialalrw sspttalrya rdlavgsnaa arvlgrvrgg edrsaadqgg es
//
LOCUS       WP_236036324             509 aa            linear   BCT 02-MAR-2025
DEFINITION  SMI1/KNR4 family protein [Heyndrickxia oleronia].
ACCESSION   WP_236036324
VERSION     WP_236036324.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia oleronia
  ORGANISM  Heyndrickxia oleronia
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
REFERENCE   1  (residues 1 to 509)
  AUTHORS   Zhang,D., Iyer,L.M. and Aravind,L.
  TITLE     A novel immunity system for bacterial nucleic acid degrading toxins
            and its recruitment in various eukaryotic and DNA viral systems
  JOURNAL   Nucleic Acids Res 39 (11), 4532-4552 (2011)
   PUBMED   21306995
REFERENCE   2  (residues 1 to 509)
  AUTHORS   Enderlin,C.S. and Selitrennikoff,C.P.
  TITLE     Cloning and characterization of a Neurospora crassa gene required
            for (1,3) beta-glucan synthase activity and cell wall formation
  JOURNAL   Proc Natl Acad Sci U S A 91 (20), 9500-9504 (1994)
   PUBMED   7937796
REFERENCE   3  (residues 1 to 509)
  AUTHORS   Hong,Z., Mann,P., Brown,N.H., Tran,L.E., Shaw,K.J., Hare,R.S. and
            DiDomenico,B.
  TITLE     Cloning and characterization of KNR4, a yeast gene involved in
            (1,3)-beta-glucan synthesis
  JOURNAL   Mol Cell Biol 14 (2), 1017-1025 (1994)
   PUBMED   8289782
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020904.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09346.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Heyndrickxia oleronia"
                     /db_xref="taxon:38875"
     Protein         1..509
                     /product="SMI1/KNR4 family protein"
                     /calculated_mol_wt=58631
     Region          1..176
                     /region_name="SMI1"
                     /note="Cell wall assembly regulator SMI1 (Killer
                     toxin-resistance protein 4) [Cell wall/membrane/envelope
                     biogenesis]; COG4282"
                     /db_xref="CDD:443423"
     Region          154..>493
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          243..264
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          265..286
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          287..308
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          309..330
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          331..352
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          353..374
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          375..399
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          400..443
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
ORIGIN      
        1 mqsiiceire klkhvfpsfl nppateleiq svekqmnlif peqlralyll hngenengpg
       61 lffglpfltl edmlqewkiw adleeeyale gdsysiptky ikeryinrnw ipiskdyggn
      121 higididpdv kgtcgqvinf grdeeikyvi aeqlsdllef inhtlknrky tihheedyty
      181 wsyganqnih fldvirslel pvlkpiksgn sdiviknwle qldnqwleii kervnnpidf
      241 vnikklylms enltnieplt kctevrelil sgnhittlep lknmlslkkl ylahtpisdl
      301 hvlanlehlq flninrskvk dctqlaklps lkeldmhete iedytalsqc nsletlsisi
      361 ynikqleavs tihtlkhlki fdmndfsedd lnllgkltql qslelinshl tgldglkssq
      421 tlreiklkdt tiedgtflgk itslkaleln hssiqnlsvv amseslerft gsfsqfnilk
      481 dlfhrkidfs tiigemtdee sdiwhqflg
//
LOCUS       WP_236036414             322 aa            linear   BCT 02-MAR-2025
DEFINITION  PD-(D/E)XK nuclease-like domain-containing protein [Rhizorhabdus
            histidinilytica].
ACCESSION   WP_236036414
VERSION     WP_236036414.1
KEYWORDS    RefSeq.
SOURCE      Rhizorhabdus histidinilytica
  ORGANISM  Rhizorhabdus histidinilytica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Rhizorhabdaceae; Rhizorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024096.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12684.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Rhizorhabdus histidinilytica"
                     /db_xref="taxon:439228"
     Protein         1..322
                     /product="PD-(D/E)XK nuclease-like domain-containing
                     protein"
                     /calculated_mol_wt=35597
     Region          63..300
                     /region_name="Cas4_I-A_I-B_I-C_I-D_II-B"
                     /note="CRISPR/Cas system-associated protein Cas4; cl00641"
                     /db_xref="CDD:469855"
ORIGIN      
        1 mmtdnpfadg yvapqsgqsd ilgdmdrerk peapapqpva tdqvlripsa dyhadpapep
       61 slsatlakll lgrsplhawm qsprlnpdck pihkktfdig raahravlgc gddyvtipad
      121 mlasngeast aaaksfiada rdrgltplka deveqieamr diaharlhey gieidpdrse
      181 lcavtkiddv wcramfdhvp adprlpildf ktcedaspaa clrailnygy hiqyghyldv
      241 wkavtgedrr fafvfqeksq pnevsvigls gsfagmaqrr aararklwge cvttnkwpgy
      301 pvgiyqidpp nwlverelqe df
//
LOCUS       WP_236036520              30 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: putative holin-like toxin [Heyndrickxia].
ACCESSION   WP_236036520
VERSION     WP_236036520.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia
  ORGANISM  Heyndrickxia
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 30)
  AUTHORS   Rajesh,T., Anthony,T., Saranya,S., Pushpam,P.L. and Gunasekaran,P.
  TITLE     Functional characterization of a new holin-like antibacterial
            protein coding gene tmp1 from goat skin surface metagenome
  JOURNAL   Appl Microbiol Biotechnol 89 (4), 1061-1073 (2011)
   PUBMED   20927512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16935.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..30
                     /organism="Heyndrickxia"
                     /db_xref="taxon:2837504"
     Protein         1..30
                     /product="putative holin-like toxin"
                     /calculated_mol_wt=3237
     Region          1..>23
                     /region_name="Hol_Tox"
                     /note="Putative Holin-like Toxin (Hol-Tox); pfam16935"
                     /db_xref="CDD:435666"
ORIGIN      
        1 mntfevlslm isfgmfviav lgfknndkns
//
LOCUS       WP_236036583             556 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Rhizorhabdus histidinilytica].
ACCESSION   WP_236036583
VERSION     WP_236036583.1
KEYWORDS    RefSeq.
SOURCE      Rhizorhabdus histidinilytica
  ORGANISM  Rhizorhabdus histidinilytica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Rhizorhabdaceae; Rhizorhabdus.
REFERENCE   1  (residues 1 to 556)
  AUTHORS   Li,Y., Bahti,P., Shaw,N., Song,G., Chen,S., Zhang,X., Zhang,M.,
            Cheng,C., Yin,J., Zhu,J.Y., Zhang,H., Che,D., Xu,H., Abbas,A.,
            Wang,B.C. and Liu,Z.J.
  TITLE     Crystal structure of a novel non-Pfam protein AF1514 from
            Archeoglobus fulgidus DSM 4304 solved by S-SAD using a Cr X-ray
            source
  JOURNAL   Proteins 71 (4), 2109-2113 (2008)
   PUBMED   18361456
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024977.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13589.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Rhizorhabdus histidinilytica"
                     /db_xref="taxon:439228"
     Protein         1..556
                     /product="ATP-binding protein"
                     /calculated_mol_wt=61907
     Region          47..178
                     /region_name="HATPase"
                     /note="Histidine kinase-like ATPase domain; cl00075"
                     /db_xref="CDD:469604"
     Site            order(51,55,58,84,86,88,90,118..121,134,136)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340391"
     Site            order(97,121)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340391"
ORIGIN      
        1 mapleirhrs irsisakhaq asrflqqslp eafvrgirdl gyrsngdaia elidnalqay
       61 adridisfgy dgttsvkkpt qiavidnghg mepdmirmav mwggthrend rdglgrygyg
      121 lpcasvslgr rftvysatlg gawycvtldl dalaegeytd ghgdivvppa tvatlppfvv
      181 eqiaqahpdg wrsgtvilid kldrlewsta qglrenlcrq fgvtyhklrh eaaifvdndf
      241 vdpidplflt adfhlfdhdd dravaldpir vevrdpedgn fcgamtlrya wlppsfgsvd
      301 kardavglna nprfailkdf hgiifsrngr lidvqtrtpw tsfinndryi kvelefsatl
      361 demfgvttsk qqvtvspriw ellqqaglpk aieqlrgkvk daklvrrlaa faprpgeqnl
      421 seramgrtae langhqpqfd lglraspyrl rfenlpgqaf fridraagar tlhmntahrf
      481 yediydgpsa tqevrtalei llfsfgdvlf gesgergaiq ielwsrrleq algmmaqhla
      541 esddidvgss swsdai
//
LOCUS       WP_236036671             262 aa            linear   BCT 02-MAR-2025
DEFINITION  conserved phage C-terminal domain-containing protein [Heyndrickxia
            oleronia].
ACCESSION   WP_236036671
VERSION     WP_236036671.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia oleronia
  ORGANISM  Heyndrickxia oleronia
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021071.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09524.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Heyndrickxia oleronia"
                     /db_xref="taxon:38875"
     Protein         1..262
                     /product="conserved phage C-terminal domain-containing
                     protein"
                     /calculated_mol_wt=30437
     Region          17..71
                     /region_name="HTH_36"
                     /note="Helix-turn-helix domain; pfam13730"
                     /db_xref="CDD:463970"
     Region          143..215
                     /region_name="Phg_2220_C"
                     /note="Conserved phage C-terminus (Phg_2220_C); pfam09524"
                     /db_xref="CDD:430663"
ORIGIN      
        1 mqknyyaiip anvrydkdlp pnakllygei talcnekgyc wagnsyfsel ykvtnrtisg
       61 winsleekgy ikrtiirnsd nnqvekriiq idtgknlhdp ieenflpygk nlhegieenf
      121 rknntvfnnt nnntkeyipf veiinylnsv ahtnyrsstk atqrvikarw negfkiqdfk
      181 kvidkksaew lndpkmnkfl rpetlfgtkf esylnqkggg qaasnrqrig tddetkskir
      241 etnerrkria rvksdtdsdl pf
//
LOCUS       WP_236036673             611 aa            linear   BCT 02-MAR-2025
DEFINITION  methylmalonyl-CoA mutase family protein [Heyndrickxia oleronia].
ACCESSION   WP_236036673
VERSION     WP_236036673.1
KEYWORDS    RefSeq.
SOURCE      Heyndrickxia oleronia
  ORGANISM  Heyndrickxia oleronia
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
REFERENCE   1  (residues 1 to 611)
  AUTHORS   Mancia,F., Keep,N.H., Nakagawa,A., Leadlay,P.F., McSweeney,S.,
            Rasmussen,B., Bosecke,P., Diat,O. and Evans,P.R.
  TITLE     How coenzyme B12 radicals are generated: the crystal structure of
            methylmalonyl-coenzyme A mutase at 2 A resolution
  JOURNAL   Structure 4 (3), 339-350 (1996)
   PUBMED   8805541
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013781.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01642.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Heyndrickxia oleronia"
                     /db_xref="taxon:38875"
     Protein         1..611
                     /product="methylmalonyl-CoA mutase family protein"
                     /GO_function="GO:0016866 - intramolecular transferase
                     activity [Evidence IEA]"
                     /GO_function="GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /calculated_mol_wt=69744
     Region          11..444
                     /region_name="MM_CoA_mutase"
                     /note="Coenzyme B12-dependent-methylmalonyl coenzyme A
                     (CoA) mutase (MCM)-like family; contains proteins similar
                     to MCM, and the large subunit of Streptomyces coenzyme
                     B12-dependent isobutyryl-CoA mutase (ICM). MCM catalyzes
                     the isomerization of...; cl00817"
                     /db_xref="CDD:469938"
ORIGIN      
        1 mnvkdikqkn fpvhsiedwe eavkqslkgr gistkdtyen ialkplytve didqrkieqi
       61 pgtgfhtrgf delgrkqygw kiaqqikkss wedlypmlqn fmqrgqetiv fdvdqvddfd
      121 qinffdlkgi efrkvplflp tknhfkglle kllrhpeken ingfvgtdii srkiakgdiv
      181 nlddrelnew iiqikqadne fpklktilid tapyhnagan aiqeiaiala esifyieslk
      241 deqweperia eklvfhfsig anffmeiakl rafrrlwstv anayqlpkey qhvttsaets
      301 sltksildpy vnllragnea faaviggidf lhvaafdeay aesnefsari arniqwilre
      361 eahlskvidp aggsyyiesl tneiaskawe lfqlidakgg iidvlksdwi qdeinqvlek
      421 rqnaiatgkq sligtnvyvn laepitfpae fhkhnantsv nrlsepferl rkksyqleqm
      481 gvsphagmic lgplkdhkar adfatgflas ggikatwske cmniddmqtf mretnypyyc
      541 vcgndevyql flgkyetwfs knnrkpiidi vgnittevfs qlknkgisgs inknqnriek
      601 ltallslwev e
//
LOCUS       WP_236036789             562 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6020 family protein [Bifidobacterium simiiventris].
ACCESSION   WP_236036789
VERSION     WP_236036789.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium simiiventris
  ORGANISM  Bifidobacterium simiiventris
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039324.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19484.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Bifidobacterium simiiventris"
                     /db_xref="taxon:2834434"
     Protein         1..562
                     /product="DUF6020 family protein"
                     /calculated_mol_wt=61583
     Region          <53..361
                     /region_name="DUF6020"
                     /note="Family of unknown function (DUF6020); pfam19484"
                     /db_xref="CDD:466106"
ORIGIN      
        1 mtalskrvta rrpstlgtav rsrfmpywtl livawlpylv lvwpgalrdd tlaqylqtag
       61 lhryytqhpl fdtlvfglfw kvggmlgspl igeaiytgvq alllsagcal vlcyirklga
      121 prwlrvsgll ylatsyvvvg svgtmgkdsl htvfflpfav lfaetcltcg rvlmrrpaal
      181 afvalafavi vskrtalmiv lcagapllav cargrirrra fvcllsaivl aqgvftpvva
      241 avthanqsps relwgimtqs vaqvahdrpq aisgerkdal dkvmrldqaa lainphrtde
      301 tfhtlredpq psageklaal rawaglglsy pdeylkawag pihgwwdmrv nfayptdsdy
      361 llrggylrqw atflpedagi agrrdvdaad adavaalrva rigrdlaplm gtsrkpawrr
      421 allgrlrrwv rddnpltama lyvtwiplmt maallvqlmr krsssrlggs sissqaavpm
      481 psrpdssdlp srpsvfssls srpseasget fpprlrlaaf sllfftilsl yaspealfwy
      541 pipvflsmpl fsalpfagac rv
//
LOCUS       WP_236036794             456 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [Bifidobacterium].
ACCESSION   WP_236036794
VERSION     WP_236036794.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium
  ORGANISM  Bifidobacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Bifidobacterium"
                     /db_xref="taxon:1678"
     Protein         1..456
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47131
     Region          28..422
                     /region_name="efflux_EmrB"
                     /note="drug resistance transporter, EmrB/QacA subfamily;
                     TIGR00711"
                     /db_xref="CDD:129794"
ORIGIN      
        1 mgrmsfpsps sgvttaataa tiaaavasfl agmdvlivnv alptiaadlg gdmavqqwvv
       61 dgytllfaal lllagsladr fgakrvfaig aalfglaslf csfawsmaal vagrcvlgva
      121 salilpasms lineanpdpr rrawalalwg aggasasavg pllgglltpi hwslvfainv
      181 pfclfilalv priapsprrp irfdwlgqtl slvglgtlva giievgaigf aapatlvlls
      241 vgllalglfv vsqakvaspm mplglfrirg mqvalqigfi mifnwygmvf ictmflqner
      301 hmgafaaglv fvpsafvtiv gnliggriit argarfsitl glaimiagfl fefltpapip
      361 vwviavglsv vgfgaaittp aaagvvlhsv npaqagiasa mfntfrqvgg aigvavfgvi
      421 atflpsldta lrsvflasal llvyvlvfel trwrgr
//
LOCUS       WP_236036917             980 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-galactosidase [Bifidobacterium simiiventris].
ACCESSION   WP_236036917
VERSION     WP_236036917.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium simiiventris
  ORGANISM  Bifidobacterium simiiventris
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 980)
  AUTHORS   Naumoff,D.G.
  TITLE     Hierarchical classification of glycoside hydrolases
  JOURNAL   Biochemistry (Mosc) 76 (6), 622-635 (2011)
   PUBMED   21639842
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014156.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02065.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..980
                     /organism="Bifidobacterium simiiventris"
                     /db_xref="taxon:2834434"
     Protein         1..980
                     /product="alpha-galactosidase"
                     /EC_number="3.2.1.22"
                     /calculated_mol_wt=104546
     Region          <325..462
                     /region_name="Glyco_hydro_36N"
                     /note="Glycosyl hydrolase family 36 N-terminal domain;
                     pfam16875"
                     /db_xref="CDD:465291"
     Region          516..863
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
     Site            order(566,597,644,710,714,756,775,778)
                     /site_type="active"
                     /db_xref="CDD:269892"
ORIGIN      
        1 mplieqfqgt aadgtdltai yaeqsaanva ialvfpddnl prfvhwgrpl adpgtvvnly
       61 dalrpqrvsg alddtawpsi lptqseswlg asrfvvrrdg velyckfave avtaalppag
      121 qpddadsidl sdlagsgsan dgssrdadsa glaesagsag ssgisdagdv nehhvaggid
      181 pghtavsese tgrkpgrlgd scptaggals sggavpghta vsgvetgrkp gesgdprltv
      241 ggslpsdvvr tahaatqsah vtgsaqsarv tvgdrlaadr parvtvgdel aadrpahvav
      301 grsehvtvgd elaaardadl qptptitvea adreqgvgit wtceldgsgl vrqkleianl
      361 gngsleighv elgfplpadt seiltatghh lrerspqrqp ltvgrfekla ltgrpdfdas
      421 lllsagepgf gftrgdvyav hvgwsgnsvl saerlpyttg vigggevllg gevtlpaanv
      481 cadtsdspta ndvtddraid rtetdalpav pmtsstyttp wvygsfghgl nevaarfhay
      541 lrnahhdwrr ahgvpdkprp vilntweavy fdqnydtlta ladkaaaigv erfvvddgwf
      601 gsrrddtsgl gdwqvsqdvw pdgpkslrsl aeyvhglgme fglwfepemv npdsdmfrah
      661 pdwvlrptag rlpmqgrsqq vvdltnpday ayvygaidtl vgelgidyik wdhnklvtea
      721 vsprtgrpai haqtlavyqi fhdlkeahpr leiescssgg grvdlgilel adriwvsdcv
      781 dpveradiqr ytsllvppfm mgehvgaspa hsthrstsqe mrmataffgh lgvewnllke
      841 pdadvaklge wiaefkkhre wfavdtcvhs dcsdpavrvd gmvkpdrsaa fyrftqltts
      901 atypaapirv pgldpdgtyr iqplwldldp mglgigneqs plgwwtpdgv lltgralaty
      961 glrpptlhpa qavlftairq
//
LOCUS       WP_236036910             428 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Bifidobacterium
            simiiventris].
ACCESSION   WP_236036910
VERSION     WP_236036910.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium simiiventris
  ORGANISM  Bifidobacterium simiiventris
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 428)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 428)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Bifidobacterium simiiventris"
                     /db_xref="taxon:2834434"
     Protein         1..428
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=46499
     Region          27..149
                     /region_name="CE2_N"
                     /note="Carbohydrate esterase 2 N-terminal; pfam17996"
                     /db_xref="CDD:465608"
     Region          157..419
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(164,215,269,401)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(164,215,269)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
ORIGIN      
        1 mhnghasdta stdhvtitpg npalrtmgri ddadperpiw vfpytqaafr ftgtsltatv
       61 vnhwnygdtk igviidgmqt avripsgaad pavntayadg nvygpvtvtl aenlpniehe
      121 avvfkrqdgm hyleilgfgl dtgaeimppl dpaptrriev fgdsvscger neaalyvgka
      181 dpdvdlsgys nawysyaait arnlgaalhd tsqggaalid gigwfcgpdy igqesiwdri
      241 eynpalgetk pwdfarytph vvivavgqnd shpvdfmaed yhgeqashwr aryvdflrgi
      301 harypkatii ctttvlrhdp awdraideav refnatigep tsepfgttry aaadtadsah
      361 ravtgtaaac tatdlthpkd ehgavayhfl ysrngaatpg hprvaeheem areltafiqs
      421 lgddiwed
//
LOCUS       WP_236036944             526 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ATP-binding cassette domain-containing protein
            [Bifidobacterium].
ACCESSION   WP_236036944
VERSION     WP_236036944.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium
  ORGANISM  Bifidobacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae.
REFERENCE   1  (residues 1 to 526)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 526)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 526)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 526)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Bifidobacterium"
                     /db_xref="taxon:1678"
     Protein         1..526
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=56395
     Region          9..519
                     /region_name="Uup"
                     /note="ATPase components of ABC transporters with
                     duplicated ATPase domains [General function prediction
                     only]; COG0488"
                     /db_xref="CDD:440254"
ORIGIN      
        1 mslnsvltls hitftypeap eplladvsva fprgwtavlg dngigkttli rialgdlape
       61 sgvvspapng ivsgycpqnt dempanlddf andwspetla irrdlgigdd wpwrfdalsg
      121 geakrlqvac alalrsdvlv ldeptnhvda ptreriiaal rsfggigilv shdvalidav
      181 adqcafferd hvcgqnvtvv rmrpgnyaaa sasaaidrqs adaalrdarr esarlssvka
      241 qrkhdatlev ssaknhrfvd pkdhdarnai kynhnpsslg pasaridaqv aaarekaagi
      301 vtaakrydgd iwidaesssr relvrlpagw lpyggdaaaa vpehgdgvav pmltvgphdr
      361 igisgsngtg kttlvnallr eielnerrtg lrlprlvlpq ntteadarra marlaalpak
      421 erglvlssva qlnadperli aggnpspgel rklllclglr rhphlivmde ptnhldlhsm
      481 qtlgraltgy pgalilvshd egflrqtvti rwslqrdgtr arltvg
//
LOCUS       WP_236036996            1560 aa            linear   BCT 02-MAR-2025
DEFINITION  SpaA isopeptide-forming pilin-related protein [Bifidobacterium
            simiiventris].
ACCESSION   WP_236036996
VERSION     WP_236036996.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium simiiventris
  ORGANISM  Bifidobacterium simiiventris
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 1560)
  AUTHORS   Kang,H.J., Paterson,N.G., Gaspar,A.H., Ton-That,H. and Baker,E.N.
  TITLE     The Corynebacterium diphtheriae shaft pilin SpaA is built of tandem
            Ig-like modules with stabilizing isopeptide and disulfide bonds
  JOURNAL   Proc Natl Acad Sci U S A 106 (40), 16967-16971 (2009)
   PUBMED   19805181
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2009 Oct 27;106(43):18427]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037639.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17802.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Bifidobacterium simiiventris"
                     /db_xref="taxon:2834434"
     Protein         1..1560
                     /product="SpaA isopeptide-forming pilin-related protein"
                     /calculated_mol_wt=165176
     Region          <319..449
                     /region_name="choice_anch_A"
                     /note="choice-of-anchor A domain; TIGR04215"
                     /db_xref="CDD:275059"
     Region          493..1113
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          860..925
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); cl02708"
                     /db_xref="CDD:445894"
     Region          1084..1139
                     /region_name="SpaA"
                     /note="Prealbumin-like fold domain; pfam17802"
                     /db_xref="CDD:465513"
     Region          <1101..1330
                     /region_name="ClfA"
                     /note="Clumping factor A-related surface protein, MSCRAMM
                     (microbial surface components recognizing adhesive matrix
                     molecules) family, DEv-IgG fold [Cell
                     wall/membrane/envelope biogenesis]; COG4932"
                     /db_xref="CDD:443959"
     Region          1222..1282
                     /region_name="SpaA"
                     /note="Prealbumin-like fold domain; pfam17802"
                     /db_xref="CDD:465513"
ORIGIN      
        1 mntrpayvrd rrvakakdla aaflavtmfv gtavagaita pyaayadnnl adgalctpst
       61 qsmgtdanpa ssrdsgvatw iggnmyvgkk padaaawkng tgpdgsyave aegltvvngk
      121 lmmkpvknsw vgagfrfgia gfgtqfrpak nsttlvvggn tsdttlpnwt nvqawshpgf
      181 lrdnghiasi agessdlwgk tgtkslgknp sntdasvnwt vtdpmehvtv ksddndtnas
      241 ddvrnlsesa yyqdyviedi saplafqtat gkvtqsvstl stltrhkyny ydegndkkgs
      301 slqydftytd dtkngtgrgl sttdsytnre klitftgtyn ptmevfnlda smltdykdgt
      361 ryrgvafafe niadtasvvi nvtgnknkni sfhngwqfww ngteisdgys nynsksnden
      421 lkkkselyak aaqkilwnfh dtdnltiygg ianegkdnky teddpaaaml gsiivvgnae
      481 sgdadankdg kadgnadnti gnfeshvttn grvytegdfs mynpyyaakf tqpgandgds
      541 ssvidmdqer hnfpwngqtt tecaaiawqk adesgnglkg ttwaiygtya daaagknaly
      601 talkdddfad kdttttggfk veglkpnaty yikevatgns dyqlntniyy vktgdanttq
      661 pvtqsvtkgv dgtftfgttd mkdgkivnkt aghavawkki adgdttntpl agsawqiskq
      721 gddktqvwni ednvnaaksv tvtptsteln atnnykatlt aavqpsdavq nvtwtftdas
      781 gnpksdesaa vlslsqtnel radvigtsdk daavyvkacs vsnpdvcssv vaitvkaatv
      841 tsftvkdssn ntvqnnasft vaqngslgft aavtpsvpit wtssdesiat vssqkdgqsa
      901 tvtmhalgsa kitvkagnkt vsftiatpst tvyfkkslvs wsnyylyydd gtggswkfak
      961 mdrtcgdyva vtipqttkdk hfllrdrdsk dgsdgwfkgn agsdftftgn avqvvdaynn
     1021 fqgstapsgc aaasaavdeg asaqpddvad addtsvavtd sttadasadg qsgvakaaac
     1081 vakdddgtnp gtkcdidtva gqfkvdglda gtylihelta pdgytlnttv yqftidpqgn
     1141 vtwnggyadg ntsgtlndql kpgadnaisd kptevtwnkv dakggkldgs qwkivspskn
     1201 adgtvntaqn tycvadnvtv ttdangnvtt dpagtafadc agtklsdaat esgvitvkgl
     1261 pvgeytltet kapngyqlpe nvtyklnvva egtstitnsn gsaltnsdia nsskpvdiqi
     1321 pvkktlkytd wpkpdgkyvk ftfqiakaes spndtpipad cngklpctid lapesnatdl
     1381 qnvtkyfgti kftdaqlnsd agtngdyakk ytyvitevvp tsgavenlry skaewkvevt
     1441 vsrdmsdgky qglkvaykvt qtknddgtem sgsgetdsfn svqngegttt gdrsemagta
     1501 sgnltakttf vntkvltglp stgtdwtgrm vllagagfil agmliaggyq fakrreavsa
//
LOCUS       WP_236037119             763 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1989 domain-containing protein [Marinomonas vulgaris].
ACCESSION   WP_236037119
VERSION     WP_236037119.1
KEYWORDS    RefSeq.
SOURCE      Marinomonas vulgaris
  ORGANISM  Marinomonas vulgaris
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Marinomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020905.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09347.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Marinomonas vulgaris"
                     /db_xref="taxon:2823372"
     Protein         1..763
                     /product="DUF1989 domain-containing protein"
                     /calculated_mol_wt=85597
     Region          156..378
                     /region_name="YcgI"
                     /note="Uncharacterized conserved protein YcgI, DUF1989
                     family [Function unknown]; COG3665"
                     /db_xref="CDD:442882"
     Region          382..763
                     /region_name="GcvT"
                     /note="Glycine cleavage system protein T
                     (aminomethyltransferase) [Amino acid transport and
                     metabolism]; COG0404"
                     /db_xref="CDD:440173"
ORIGIN      
        1 mdklqnalme pkerhqvyrv qgqealrlti kqgecieits pdrqqgceil lipesilptc
       61 ftehptapas raraqlaqqs tsaqqlstql sswgitdahl esaycfdane lpnmifdqat
      121 alivlccgen mpvdeqqpvt elyvkhgssd rnndlpapla evkneyrvpr cnavsyqvka
      181 gewiqiidve grqcsdfval dyqalqqgke iildevgtrs dtgrstplpg iyskftdpyq
      241 qnmmelvqdt vgrhdtfmya cnakfyeesg yfghanctdn inrvlkpfgv ksrfgwpain
      301 fffntvasqc gaigfaepys ragdyvlvra srdmlcvsta cpddidpsng wnptdihiri
      361 ygaehdfpra igyrltpeel prmtkqtgfh pstsqltkqf teyrgywvas eydnwgakae
      421 ylacrervam idlsplrkle irgpdaedfl qlaltrnvrr vsvgeivysa mchetggmid
      481 dgtlfrlgeq tfrwvcgdsy gaiwlrelae krgfnvsiqe stdqihnvav qgprsrellq
      541 kliwtresqi dfvdlkwfhf ligrlggpdg iplmvsrtgy tgelgfevwc hpdhatkvwd
      601 aiwqagqafd iaplgfdald mlrieaglif aehefcpetn pfeagigftt plktqqedfi
      661 graaieqqsp asrkklvglr lesndlvhhg dqvfngrypv glvtssmvsp llkgqlamcr
      721 vspafsevgt eleigqldgq qkrikaivtg lpfydpertk vrs
//
LOCUS       WP_236037171             495 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3612 domain-containing protein [Marinomonas vulgaris].
ACCESSION   WP_236037171
VERSION     WP_236037171.1
KEYWORDS    RefSeq.
SOURCE      Marinomonas vulgaris
  ORGANISM  Marinomonas vulgaris
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Marinomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023689.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12268.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Marinomonas vulgaris"
                     /db_xref="taxon:2823372"
     Protein         1..495
                     /product="DUF3612 domain-containing protein"
                     /calculated_mol_wt=54687
     Region          1..75
                     /region_name="HipB"
                     /note="Transcriptional regulator, contains XRE-family HTH
                     domain [Transcription]; COG1396"
                     /db_xref="CDD:441006"
     Region          31..>313
                     /region_name="COG3800"
                     /note="Predicted transcriptional regulator [General
                     function prediction only]"
                     /db_xref="CDD:443013"
     Region          316..490
                     /region_name="DUF3612"
                     /note="Protein of unknown function (DUF3612); pfam12268"
                     /db_xref="CDD:432439"
ORIGIN      
        1 mgtkirnlrk rnrltmedls srcikidpec apsvsylsmi ergkripsed vleviasvfq
       61 knvdwflddi peedaitpsk gsgggingmp lepnflfskd ilqiaipeml sqtgtsgrqf
      121 ahllirahqe hhqnhfpdle raaeeigkkr lplslddlvd itkqmglqik wfrktpasvl
      181 qeigsngnnl vtsffdppnt vyinqimktq phrlkynlav hightvlhdk dglknilvtg
      241 rneisplqar qaagpssgmd aqdilyawrd fecsffagal lcpkvpfrqm ldrngyeint
      301 aqlagvsesv amrrmtaasp yphwhyfday apgklkavyr gngiplpwgn mslvedpchh
      361 wavfrkineq ssgssaqisi lnvadepriy acesikvedl agnshvicsg idlnpaiaaq
      421 gkdaisiand lkqacvtggg sshiprgikk dlmsvakiln inwvergies darlicsrga
      481 vcprspscyq ecghk
//
LOCUS       WP_236037250             191 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1007 family protein [Marinomonas vulgaris].
ACCESSION   WP_236037250
VERSION     WP_236037250.1
KEYWORDS    RefSeq.
SOURCE      Marinomonas vulgaris
  ORGANISM  Marinomonas vulgaris
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Marinomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017985.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06226.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Marinomonas vulgaris"
                     /db_xref="taxon:2823372"
     Protein         1..191
                     /product="DUF1007 family protein"
                     /calculated_mol_wt=21302
     Region          1..>171
                     /region_name="DUF1007"
                     /note="Protein of unknown function (DUF1007); cl01487"
                     /db_xref="CDD:470221"
ORIGIN      
        1 msgmmrfvlc lgmavffags amahphvwvd sqyrvtvnqa dvthleatwg ldlftstsli
       61 aeydvngdge ftgqekldmv eilqsfdqyg ffmkmkqdga dltpsevril dvrirdqmlw
      121 irlgvelpaa vnletstlsm afgddelyfa mepleeglvr lsgalsetct pmereatets
      181 vvfwvdltcr s
//
LOCUS       WP_236037362             335 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-binding dehydrogenase [Belnapia arida].
ACCESSION   WP_236037362
VERSION     WP_236037362.1
KEYWORDS    RefSeq.
SOURCE      Belnapia arida
  ORGANISM  Belnapia arida
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Belnapia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00107.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Belnapia arida"
                     /db_xref="taxon:2804533"
     Protein         1..335
                     /product="zinc-binding dehydrogenase"
                     /calculated_mol_wt=35336
     Region          24..333
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
     Site            order(33..35,38,143,147,168..171,173..174,192..193,197,
                     212,236..237,258..259,283..285)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176178"
ORIGIN      
        1 mfadrdtrla evaeppppgp gelrlrmrav alnhidvwgw rgmafarrql pltvgaeavg
       61 evvaigegve gwqvgqlavp ygaqtcgqcr acregrdnlc envsgvkgfh ldgfaqeian
      121 qqarlcvavp qgiavedaac aaitfstveh mlfdnarlea getilvqaag sgigtvavlv
      181 akamgctvia tagsdekcer vralgadhvv nyttdrfesv arkvtrkrgv dvvfehvgam
      241 twagsllslr mggrlvtcgs tsgvsaetnl mmlfqrqlri igsfgasmrn vadglgrmag
      301 girpvidgtv plegfagala rlearqvfgk ivvml
//
LOCUS       WP_236037395             458 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Belnapia arida].
ACCESSION   WP_236037395
VERSION     WP_236037395.1
KEYWORDS    RefSeq.
SOURCE      Belnapia arida
  ORGANISM  Belnapia arida
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Belnapia.
REFERENCE   1  (residues 1 to 458)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 458)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 458)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 458)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Belnapia arida"
                     /db_xref="taxon:2804533"
     Protein         1..458
                     /product="ATP-binding protein"
                     /calculated_mol_wt=49704
     Region          <170..457
                     /region_name="envZ"
                     /note="osmolarity sensor protein; Provisional; PRK09467"
                     /db_xref="CDD:236531"
ORIGIN      
        1 msatsptapw rfwprslagr talvlllalt avqaagltih aldrvdlqrf aqareisars
       61 isawrtvila padrrgqmla elelpqglea tldekplarl dqppvpppia rmlrleqlis
      121 gsprfrprev ltswgergpl ffvslrlpsg ewlnlritlp pprpwhsetf liaffamtla
      181 agllinwavr rltrpvrlla eaaerlgrdv nappmpergp tevakaahaf ntmaerirrf
      241 vgdrtqmlaa ighdlrtpit rlrlraefmd ddeqrrkmla dldemeamva atlafardds
      301 ageptvaldl aalcrtvlde aadarpdlae aigysgperl avqarpvalk ralanlvgna
      361 layggaarla ltgpeaprgp gggivrlave degpgipddq leavfqpfrr leasrnretg
      421 gtglglpiar nifrahggdv vlrnrkgggl valatlpg
//
LOCUS       WP_236037400             299 aa            linear   BCT 02-MAR-2025
DEFINITION  iron-containing redox enzyme family protein [Belnapia arida].
ACCESSION   WP_236037400
VERSION     WP_236037400.1
KEYWORDS    RefSeq.
SOURCE      Belnapia arida
  ORGANISM  Belnapia arida
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Belnapia.
REFERENCE   1  (residues 1 to 299)
  AUTHORS   Wilks,A.
  TITLE     Heme oxygenase: evolution, structure, and mechanism
  JOURNAL   Antioxid Redox Signal 4 (4), 603-614 (2002)
   PUBMED   12230872
REFERENCE   2  (residues 1 to 299)
  AUTHORS   Ryter,S.W. and Tyrrell,R.M.
  TITLE     The heme synthesis and degradation pathways: role in oxidant
            sensitivity. Heme oxygenase has both pro- and antioxidant
            properties
  JOURNAL   Free Radic Biol Med 28 (2), 289-309 (2000)
   PUBMED   11281297
REFERENCE   3  (residues 1 to 299)
  AUTHORS   Maines,M.D.
  TITLE     Heme oxygenase: function, multiplicity, regulatory mechanisms, and
            clinical applications
  JOURNAL   FASEB J 2 (10), 2557-2568 (1988)
   PUBMED   3290025
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10628843
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Belnapia arida"
                     /db_xref="taxon:2804533"
     Protein         1..299
                     /product="iron-containing redox enzyme family protein"
                     /EC_number="1.-.-.-"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=33225
     Region          112..285
                     /region_name="Haem_oxygenas_2"
                     /note="Iron-containing redox enzyme; pfam14518"
                     /db_xref="CDD:434009"
ORIGIN      
        1 mpegslyptn mpedaaqdrl qrrladlnrr rftpslpggd weqdreelaa lereemgfle
       61 arraavvara aeaptdpdgf iawfeeldrt gpgqgdplfp wlaerasmne mrwfltqeva
      121 geagfedlaa ltqirmpqqp kleiarnywd emgrgnpkgm hgplldvlah rlglepries
      181 tvwealalan vmaglaanrr yayhsvgalg vieqtapgrs amvakglkrl kvpagdrhyf
      241 dlhaildvkh slawnaeair plvaedprya tamaegalmr lecgaacfar yrralrlal
//
LOCUS       WP_236037430             573 aa            linear   BCT 02-MAR-2025
DEFINITION  PAS domain-containing protein [Belnapia arida].
ACCESSION   WP_236037430
VERSION     WP_236037430.1
KEYWORDS    RefSeq.
SOURCE      Belnapia arida
  ORGANISM  Belnapia arida
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Belnapia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024818.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13426.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Belnapia arida"
                     /db_xref="taxon:2804533"
     Protein         1..573
                     /product="PAS domain-containing protein"
                     /calculated_mol_wt=62359
     Region          44..553
                     /region_name="PRK13557"
                     /note="histidine kinase; Provisional"
                     /db_xref="CDD:237425"
ORIGIN      
        1 mtdptetaag vpadasmdqg aleplgrpgl hhwrqaeisd ttldergsvf faavemtrmp
       61 miladprqed cpiafannaf ldltgyeeae vvgrncrflq gtgtdpasvr qmreaiqerr
      121 ptaleilnyr rdgtpfwnai fmgpvfdrdg elifffasql dvskrreseq slrqaqkmea
      181 igqltaglah dfnnllhvid gslerlktkr hddsaferfh kaaiaaterg tkltrqllaf
      241 arrtrleprg vdltslvnsf sellntsvgd ktelhlslqq rlplvrvdvn hlemallniv
      301 vnardaspgg gaitittrav hlngdaaarh lepgdyvllc vtdegvgmps hvraratepf
      361 fttkgpqhgt glglamvhgf vqqsggrlei eselgegttv rmifprhipe eaaegaaptg
      421 yqaravdeva rvplilvvdd greiaemard alaetgyrva tahsaeealr sfdeaaaagd
      481 pfdlvfsdvl mpgganglvl aeqvrarsaa tpvilttgyn demsidgpqa ialevlgkpy
      541 krtelidriq aglrrgarmg spretsdfgh iea
//
LOCUS       WP_236037562             298 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Belnapia arida].
ACCESSION   WP_236037562
VERSION     WP_236037562.1
KEYWORDS    RefSeq.
SOURCE      Belnapia arida
  ORGANISM  Belnapia arida
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Belnapia.
REFERENCE   1  (residues 1 to 298)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Belnapia arida"
                     /db_xref="taxon:2804533"
     Protein         1..298
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=31455
     Region          6..294
                     /region_name="PRK11139"
                     /note="DNA-binding transcriptional activator GcvA;
                     Provisional"
                     /db_xref="CDD:182990"
ORIGIN      
        1 mslpamrrlp flngvrafea agrtgsfaaa aeelhvspaa isrmvkllea rmgvalferr
       61 anrlsltaag aryragltal ldglagltee vaamggrqvl tlgvgptfai rwliprladw
      121 qrrepgievr ittggagvpy aedwtcgirl gdgrwpglva qplfaadltp vcapglarrl
      181 grvedlages llrvdhaped wprwlaaagv agvaaagprf dfyghalqaa adgvgvamgi
      241 rpyidddlaa grlvapfprf vskgggwflv hqpfragepa fdafarwitg iaqasptg
//
LOCUS       WP_236037696             307 aa            linear   BCT 02-MAR-2025
DEFINITION  polysaccharide deacetylase family protein [Belnapia arida].
ACCESSION   WP_236037696
VERSION     WP_236037696.1
KEYWORDS    RefSeq.
SOURCE      Belnapia arida
  ORGANISM  Belnapia arida
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Belnapia.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Freiberg,C., Fellay,R., Bairoch,A., Broughton,W.J., Rosenthal,A.
            and Perret,X.
  TITLE     Molecular basis of symbiosis between Rhizobium and legumes
  JOURNAL   Nature 387 (6631), 394-401 (1997)
   PUBMED   9163424
REFERENCE   2  (residues 1 to 307)
  AUTHORS   Mishra,C., Semino,C.E., McCreath,K.J., de la Vega,H., Jones,B.J.,
            Specht,C.A. and Robbins,P.W.
  TITLE     Cloning and expression of two chitin deacetylase genes of
            Saccharomyces cerevisiae
  JOURNAL   Yeast 13 (4), 327-336 (1997)
   PUBMED   9133736
REFERENCE   3  (residues 1 to 307)
  AUTHORS   Millward-Sadler,S.J., Poole,D.M., Henrissat,B., Hazlewood,G.P.,
            Clarke,J.H. and Gilbert,H.J.
  TITLE     Evidence for a general role for high-affinity non-catalytic
            cellulose binding domains in microbial plant cell wall hydrolases
  JOURNAL   Mol Microbiol 11 (2), 375-382 (1994)
   PUBMED   8170399
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013672.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01522.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Belnapia arida"
                     /db_xref="taxon:2804533"
     Protein         1..307
                     /product="polysaccharide deacetylase family protein"
                     /GO_function="GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=33630
     Region          27..298
                     /region_name="CE4_SF"
                     /note="Catalytic NodB homology domain of the carbohydrate
                     esterase 4 superfamily; cl15692"
                     /db_xref="CDD:472828"
ORIGIN      
        1 mtdlpsgmpp atrdlagygr tppdprwpgg arlalsfvvn veegaelsma sgdernervp
       61 eshqlveghp dpcmethfay gsrvgiwril dlfdrfgvka tfsccgrava atpalaaapa
      121 taghevsahg wrwemlagmp eaqeraviaa tvetlaraag trpvgwhtks apsvntrrll
      181 iegggflyds daydddlprl vevagrphvi lpysfdtndm rfapgqgfvq ardfaeycig
      241 afdwlmqeaa hqprmmsvgl hlrtigkpgr irglemlleh vtrqpgawia rrmdiarhwr
      301 vrmglpa
//
LOCUS       WP_236038044             236 aa            linear   BCT 02-MAR-2025
DEFINITION  lanthionine synthetase LanC family protein [Ktedonobacter
            robiniae].
ACCESSION   WP_236038044
VERSION     WP_236038044.1
KEYWORDS    RefSeq.
SOURCE      Ktedonobacter robiniae
  ORGANISM  Ktedonobacter robiniae
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.
REFERENCE   1  (residues 1 to 236)
  AUTHORS   Xie,L., Chatterjee,C., Balsara,R., Okeley,N.M. and van der
            Donk,W.A.
  TITLE     Heterologous expression and purification of SpaB involved in
            subtilin biosynthesis
  JOURNAL   Biochem Biophys Res Commun 295 (4), 952-957 (2002)
   PUBMED   12127987
REFERENCE   2  (residues 1 to 236)
  AUTHORS   Mayer,H., Bauer,H., Breuss,J., Ziegler,S. and Prohaska,R.
  TITLE     Characterization of rat LANCL1, a novel member of the lanthionine
            synthetase C-like protein family, highly expressed in testis and
            brain
  JOURNAL   Gene 269 (1-2), 73-80 (2001)
   PUBMED   11376939
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05147.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Ktedonobacter robiniae"
                     /db_xref="taxon:2778365"
     Protein         1..236
                     /product="lanthionine synthetase LanC family protein"
                     /GO_process="GO:0031179 - peptide modification [Evidence
                     IEA]"
                     /calculated_mol_wt=25568
     Region          <20..229
                     /region_name="LanC_like"
                     /note="Cyclases involved in the biosynthesis of
                     lantibiotics, and similar proteins; cl04955"
                     /db_xref="CDD:471159"
ORIGIN      
        1 mtsfprrhpn rrgsvwtgig ragwiasvet valagmahgt agialnllrl asvsgdqrfh
       61 eavlqafaye rhlfspeann wpdlrlgskp edengkyrms awchgaagil larlgclrfv
      121 ddaairqeie vgiettfakg lgsshslchg dfgnidillt aaqmlerpql lerierampk
      181 lldaidrqgw vsggpmglet pglmmglsga gyallrlafm hyvpsvlqle ppisvq
//
LOCUS       WP_236038070             553 aa            linear   BCT 02-MAR-2025
DEFINITION  hydantoinase B/oxoprolinase family protein [Ktedonobacter
            robiniae].
ACCESSION   WP_236038070
VERSION     WP_236038070.1
KEYWORDS    RefSeq.
SOURCE      Ktedonobacter robiniae
  ORGANISM  Ktedonobacter robiniae
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.
REFERENCE   1  (residues 1 to 553)
  AUTHORS   Watabe,K., Ishikawa,T., Mukohara,Y. and Nakamura,H.
  TITLE     Cloning and sequencing of the genes involved in the conversion of
            5-substituted hydantoins to the corresponding L-amino acids from
            the native plasmid of Pseudomonas sp. strain NS671
  JOURNAL   J Bacteriol 174 (3), 962-969 (1992)
   PUBMED   1732229
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10000641
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Ktedonobacter robiniae"
                     /db_xref="taxon:2778365"
     Protein         1..553
                     /product="hydantoinase B/oxoprolinase family protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=58823
     Region          4..528
                     /region_name="HyuB"
                     /note="N-methylhydantoinase B/oxoprolinase/acetone
                     carboxylase, alpha subunit [Amino acid transport and
                     metabolism, Secondary metabolites biosynthesis, transport
                     and catabolism]; COG0146"
                     /db_xref="CDD:439916"
ORIGIN      
        1 miesrkvtpi sleifrsalt aiaeemgtvl mlssyspnik errdfscalf dvqgrliaqa
       61 ahipvhlgam pdsvataltt fdhfapgdii alndpflggs hlpditlitp iyaeiqnapc
      121 ligfaanrah hsdvggisag smplaseiyq egiiippvkl weagqpnqpl lslllrnvrt
      181 paerrgdlaa qvaanrtavr rmeemvarws lptlqahiee liayarritc atianmpdgt
      241 yrfedylddd gigeesvkia vsvtvsgeam tvdfsesssq vrgnintvaa vaksaayytv
      301 rclmpedapm nhgtfapvtv iapagtvvna rppagvaqgn vetsqritdt ifgalaqalp
      361 eaipaagqgt mnnitaggid prtgqpfayy etmgggmgah pdqdglsgah vhmsntlntp
      421 veafeyaypm risryelrag sggqgkhhgg dglvreitfe vptdvtllte rrrfapyglq
      481 ggepgqrgen rlvhegqekl lpgkvhfras pgdrlaiasp ggggwgkasp ggeereiqvg
      541 davlwpakid hsa
//
LOCUS       WP_236038082             162 aa            linear   BCT 02-MAR-2025
DEFINITION  CBS domain-containing protein [Ktedonobacter robiniae].
ACCESSION   WP_236038082
VERSION     WP_236038082.1
KEYWORDS    RefSeq.
SOURCE      Ktedonobacter robiniae
  ORGANISM  Ktedonobacter robiniae
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.
REFERENCE   1  (residues 1 to 162)
  AUTHORS   Scott,J.W., Hawley,S.A., Green,K.A., Anis,M., Stewart,G.,
            Scullion,G.A., Norman,D.G. and Hardie,D.G.
  TITLE     CBS domains form energy-sensing modules whose binding of adenosine
            ligands is disrupted by disease mutations
  JOURNAL   J Clin Invest 113 (2), 274-284 (2004)
   PUBMED   14722619
REFERENCE   2  (residues 1 to 162)
  AUTHORS   Kemp,B.E.
  TITLE     Bateman domains and adenosine derivatives form a binding contract
  JOURNAL   J Clin Invest 113 (2), 182-184 (2004)
   PUBMED   14722609
REFERENCE   3  (residues 1 to 162)
  AUTHORS   Janosik,M., Kery,V., Gaustadnes,M., Maclean,K.N. and Kraus,J.P.
  TITLE     Regulation of human cystathionine beta-synthase by
            S-adenosyl-L-methionine: evidence for two catalytically active
            conformations involving an autoinhibitory domain in the C-terminal
            region
  JOURNAL   Biochemistry 40 (35), 10625-10633 (2001)
   PUBMED   11524006
REFERENCE   4  (residues 1 to 162)
  AUTHORS   Zhang,R., Evans,G., Rotella,F.J., Westbrook,E.M., Beno,D.,
            Huberman,E., Joachimiak,A. and Collart,F.R.
  TITLE     Characteristics and crystal structure of bacterial
            inosine-5'-monophosphate dehydrogenase
  JOURNAL   Biochemistry 38 (15), 4691-4700 (1999)
   PUBMED   10200156
REFERENCE   5  (residues 1 to 162)
  AUTHORS   Ponting,C.P.
  TITLE     CBS domains in CIC chloride channels implicated in myotonia and
            nephrolithiasis (kidney stones)
  JOURNAL   J Mol Med (Berl) 75 (3), 160-163 (1997)
   PUBMED   9106071
REFERENCE   6  (residues 1 to 162)
  AUTHORS   Bateman,A.
  TITLE     The structure of a domain common to archaebacteria and the
            homocystinuria disease protein
  JOURNAL   Trends Biochem Sci 22 (1), 12-13 (1997)
   PUBMED   9020585
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012780.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00571.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Ktedonobacter robiniae"
                     /db_xref="taxon:2778365"
     Protein         1..162
                     /product="CBS domain-containing protein"
                     /calculated_mol_wt=17729
     Region          41..157
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
     Site            order(47,49..51,73..75,135,148,150,152..153,156)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:341382"
     Region          47..110
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341382"
     Site            order(73,84,89..90,93,115,135..137,152)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:341382"
     Region          115..156
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341382"
ORIGIN      
        1 mfegvprkqq vcariwmren nllvqaeseq pvmqdvlayr rshsqsmplv vsitpndsva
       61 davellrryg isqtpvmegg kmvgsltedl llrrlasgep lesttvgqlq gpafpvldav
      121 seareaytlf nmghsavavv hngllegivt ksdllefwah ar
//
LOCUS       WP_236037899             326 aa            linear   BCT 02-MAR-2025
DEFINITION  TOTE conflict system archaeo-eukaryotic primase domain-containing
            protein [Ktedonobacter robiniae].
ACCESSION   WP_236037899
VERSION     WP_236037899.1
KEYWORDS    RefSeq.
SOURCE      Ktedonobacter robiniae
  ORGANISM  Ktedonobacter robiniae
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.
REFERENCE   1  (residues 1 to 326)
  AUTHORS   Aravind,L., Iyer,L.M. and Burroughs,A.M.
  TITLE     Discovering Biological Conflict Systems Through Genome Analysis:
            Evolutionary Principles and Biochemical Novelty
  JOURNAL   Annu Rev Biomed Data Sci 5, 367-391 (2022)
   PUBMED   35609893
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047202.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22548.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Ktedonobacter robiniae"
                     /db_xref="taxon:2778365"
     Protein         1..326
                     /product="TOTE conflict system archaeo-eukaryotic primase
                     domain-containing protein"
                     /calculated_mol_wt=36401
     Region          <17..>225
                     /region_name="PrimPol_Msp"
                     /note="CRISPR-associated primase-polymerase type A1;
                     NF040561"
                     /db_xref="CDD:468537"
     Region          242..>315
                     /region_name="DnaG"
                     /note="DNA primase (bacterial type) [Replication,
                     recombination and repair]; COG0358"
                     /db_xref="CDD:440127"
ORIGIN      
        1 msfsreelgv lvntcigrrn dyavqrddgg ylragrvlty dlvqahlagq vtlgtyvide
       61 qggcrfavfd cdkrgglvdl vdvqerlaad givsyleasr rgghlwvfla sllspaqlrr
      121 wllpycpegm effpkqdstl agpgslvrvp lgvhrltser ypfvhldrse wfrrlvpvas
      181 evgaslawls tvqrvtplaa vssperehaq eatkkntlqk nvaaltrpte rmtiqewcaq
      241 qdavgvigry valdrsglgc cpfgwhhsdg kdthpslwvh epsrlggacw ychtwkqggs
      301 vfdflrlyyg learelwqri qkggql
//
LOCUS       WP_236038159             157 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Belnapia arida].
ACCESSION   WP_236038159
VERSION     WP_236038159.1
KEYWORDS    RefSeq.
SOURCE      Belnapia arida
  ORGANISM  Belnapia arida
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Belnapia.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Davies,D.R., Mahnke Braam,L., Reznikoff,W.S. and Rayment,I.
  TITLE     The three-dimensional structure of a Tn5 transposase-related
            protein determined to 2.9-A resolution
  JOURNAL   J Biol Chem 274 (17), 11904-11913 (1999)
   PUBMED   10207011
REFERENCE   2  (residues 1 to 157)
  AUTHORS   DasSarma,S.
  TITLE     Identification and analysis of the gas vesicle gene cluster on an
            unstable plasmid of Halobacterium halobium
  JOURNAL   Experientia 49 (6-7), 482-486 (1993)
   PUBMED   8335077
REFERENCE   3  (residues 1 to 157)
  AUTHORS   Ferrante,A.A. and Lessie,T.G.
  TITLE     Nucleotide sequence of IS402 from Pseudomonas cepacia
  JOURNAL   Gene 102 (1), 143-144 (1991)
   PUBMED   1650732
REFERENCE   4  (residues 1 to 157)
  AUTHORS   De Meirsman,C., Van Soom,C., Verreth,C., Van Gool,A. and
            Vanderleyden,J.
  TITLE     Nucleotide sequence analysis of IS427 and its target sites in
            Agrobacterium tumefaciens T37
  JOURNAL   Plasmid 24 (3), 227-234 (1990)
   PUBMED   1963949
REFERENCE   5  (residues 1 to 157)
  AUTHORS   Sato,S., Nakada,Y. and Shiratsuchi,A.
  TITLE     IS421, a new insertion sequence in Escherichia coli
  JOURNAL   FEBS Lett 249 (1), 21-26 (1989)
   PUBMED   2542093
REFERENCE   6  (residues 1 to 157)
  AUTHORS   Kroger,M. and Hobom,G.
  TITLE     Structural analysis of insertion sequence IS5
  JOURNAL   Nature 297 (5862), 159-162 (1982)
   PUBMED   6281654
REFERENCE   7  (residues 1 to 157)
  AUTHORS   Klaer,R., Kuhn,S., Tillmann,E., Fritz,H.J. and Starlinger,P.
  TITLE     The sequence of IS4
  JOURNAL   Mol Gen Genet 181 (2), 169-175 (1981)
   PUBMED   6268937
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01609.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Belnapia arida"
                     /db_xref="taxon:2804533"
     Protein         1..157
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=16780
     Region          <6..>152
                     /region_name="IS5"
                     /note="Transposase and inactivated derivatives, IS5 family
                     [Mobilome: prophages, transposons]; COG3039"
                     /db_xref="CDD:442273"
ORIGIN      
        1 mllaiwhdls dvrlaealdd ragfrrelaq hgldqvlfea vtrqlevkgv rvrtgtlvda
       61 tlipsasirq dgeakraghr rrkpvhghka hlatdegagl vrgvevttan vhdaaglvam
      121 qppkagnvyg dsaftgglae rliisrggrp rtvwtgt
//
LOCUS       WP_236038228             256 aa            linear   BCT 02-MAR-2025
DEFINITION  group II intron maturase-specific domain-containing protein
            [Ktedonobacter robiniae].
ACCESSION   WP_236038228
VERSION     WP_236038228.1
KEYWORDS    RefSeq.
SOURCE      Ktedonobacter robiniae
  ORGANISM  Ktedonobacter robiniae
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.
REFERENCE   1  (residues 1 to 256)
  AUTHORS   Centron,D. and Roy,P.H.
  TITLE     Presence of a group II intron in a multiresistant Serratia
            marcescens strain that harbors three integrons and a novel gene
            fusion
  JOURNAL   Antimicrob Agents Chemother 46 (5), 1402-1409 (2002)
   PUBMED   11959575
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019984.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08388.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Ktedonobacter robiniae"
                     /db_xref="taxon:2778365"
     Protein         1..256
                     /product="group II intron maturase-specific
                     domain-containing protein"
                     /calculated_mol_wt=29395
     Region          27..105
                     /region_name="GIIM"
                     /note="Group II intron, maturase-specific domain;
                     pfam08388"
                     /db_xref="CDD:429966"
     Region          <167..216
                     /region_name="McrA"
                     /note="5-methylcytosine-specific restriction endonuclease
                     McrA [Defense mechanisms]; COG1403"
                     /db_xref="CDD:441013"
ORIGIN      
        1 meidraiavr igsawrkktc rtrkeavkrh tadmkvvidr nqhapqekli eelnrvnrgw
       61 anyhrrttas ktfhacdhll ylqlkrwakr rhpnkgghwi ankywhvdkg qgwqfqsqqa
      121 klwkhgqahv qrhikvkgaa spyngdllyw sqrlkthplc ngvkgvllqk qqgkcrwcel
      181 lfqdtdviei dhitpksegg geelsnkfll hrhchderha rrvngicakd piieepcdgk
      241 psstvlkpsg ggdsla
//
LOCUS       WP_236038238             210 aa            linear   BCT 02-MAR-2025
DEFINITION  YjbF family lipoprotein [Belnapia arida].
ACCESSION   WP_236038238
VERSION     WP_236038238.1
KEYWORDS    RefSeq.
SOURCE      Belnapia arida
  ORGANISM  Belnapia arida
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Belnapia.
REFERENCE   1  (residues 1 to 210)
  AUTHORS   Sathiyamoorthy,K., Mills,E., Franzmann,T.M., Rosenshine,I. and
            Saper,M.A.
  TITLE     The crystal structure of Escherichia coli group 4 capsule protein
            GfcC reveals a domain organization resembling that of Wza
  JOURNAL   Biochemistry 50 (24), 5465-5476 (2011)
   PUBMED   21449614
REFERENCE   2  (residues 1 to 210)
  AUTHORS   Ferrieres,L., Aslam,S.N., Cooper,R.M. and Clarke,D.J.
  TITLE     The yjbEFGH locus in Escherichia coli K-12 is an operon encoding
            proteins involved in exopolysaccharide production
  JOURNAL   Microbiology (Reading) 153 (Pt 4), 1070-1080 (2007)
   PUBMED   17379715
REFERENCE   3  (residues 1 to 210)
  AUTHORS   Peleg,A., Shifrin,Y., Ilan,O., Nadler-Yona,C., Nov,S., Koby,S.,
            Baruch,K., Altuvia,S., Elgrably-Weiss,M., Abe,C.M., Knutton,S.,
            Saper,M.A. and Rosenshine,I.
  TITLE     Identification of an Escherichia coli operon required for formation
            of the O-antigen capsule
  JOURNAL   J Bacteriol 187 (15), 5259-5266 (2005)
   PUBMED   16030220
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022552.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11102.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Belnapia arida"
                     /db_xref="taxon:2804533"
     Protein         1..210
                     /product="YjbF family lipoprotein"
                     /calculated_mol_wt=22811
     Region          16..205
                     /region_name="YjbF"
                     /note="Group 4 capsule polysaccharide lipoprotein gfcB,
                     YjbF; pfam11102"
                     /db_xref="CDD:431654"
ORIGIN      
        1 mrawplllpl llaacgdtlf aryaetawse averaatple dlpepdgpal rlwirgrpaa
       61 avllqeiger riwrtaagqv vsteggrvta tagfrqyvaa thfdgpdpla npaelldhpa
      121 aarrlvdlqd pdggpegmrf glaldcrlra eateeaeill vrercrsrgr fgftnlfwve
      181 aaggavvrae qwigpampml vmeflgprss
//
LOCUS       WP_236038278             116 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Ktedonobacter
            robiniae].
ACCESSION   WP_236038278
VERSION     WP_236038278.1
KEYWORDS    RefSeq.
SOURCE      Ktedonobacter robiniae
  ORGANISM  Ktedonobacter robiniae
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024908.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13518.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Ktedonobacter robiniae"
                     /db_xref="taxon:2778365"
     Protein         1..116
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=13095
     Region          8..>114
                     /region_name="transpos_IS630"
                     /note="IS630 family transposase; NF033545"
                     /db_xref="CDD:468076"
ORIGIN      
        1 mkaystdlre rvvraveegr sreeivqlfg vsratikhya kqyreagdlg pkpipgrpav
       61 keaslrsglw sqleanrdat leehchiwea ihgqqvraat mgraikhlgw trkkrp
//
LOCUS       WP_236038317              90 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Ktedonobacter robiniae].
ACCESSION   WP_236038317
VERSION     WP_236038317.1
KEYWORDS    RefSeq.
SOURCE      Ktedonobacter robiniae
  ORGANISM  Ktedonobacter robiniae
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024751.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13358.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Ktedonobacter robiniae"
                     /db_xref="taxon:2778365"
     Protein         1..90
                     /product="transposase"
                     /calculated_mol_wt=10082
     Region          <41..79
                     /region_name="COG3335"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442564"
ORIGIN      
        1 mwcvfcdcfc arsqascssf gtvppsiaar pskiswrkqg aaarihlerl payapefnpq
       61 egvwnllkrr elknrcckdl aeleqellla
//
LOCUS       WP_236038581              65 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Ktedonobacter robiniae].
ACCESSION   WP_236038581
VERSION     WP_236038581.1
KEYWORDS    RefSeq.
SOURCE      Ktedonobacter robiniae
  ORGANISM  Ktedonobacter robiniae
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.
REFERENCE   1  (residues 1 to 65)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 65)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Ktedonobacter robiniae"
                     /db_xref="taxon:2778365"
     Protein         1..65
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=7646
     Region          <2..65
                     /region_name="XerD"
                     /note="Site-specific recombinase XerD [Replication,
                     recombination and repair]; COG4974"
                     /db_xref="CDD:443999"
ORIGIN      
        1 mrkrrytdrg vrkmltryaq aagitrsmsp hkwrhflftw lkkegiedal iqpysghatr
       61 qslei
//
LOCUS       WP_236038583             317 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3102 domain-containing protein [Ktedonobacter robiniae].
ACCESSION   WP_236038583
VERSION     WP_236038583.1
KEYWORDS    RefSeq.
SOURCE      Ktedonobacter robiniae
  ORGANISM  Ktedonobacter robiniae
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11300.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Ktedonobacter robiniae"
                     /db_xref="taxon:2778365"
     Protein         1..317
                     /product="DUF3102 domain-containing protein"
                     /calculated_mol_wt=36507
     Region          50..>96
                     /region_name="DUF3102"
                     /note="Protein of unknown function (DUF3102); pfam11300"
                     /db_xref="CDD:402753"
     Region          <116..>253
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
ORIGIN      
        1 mptprrqdaq avdqqiafdy slldeetrhf vyqktaetqg ylkrtaedvv riglnlravk
       61 dhlphghfma wakselglsr qscqnfmrva erfgerihrf gaipisalye lldapedvlr
      121 qieeqqiplt rlavraakeq arqetvgehh ltassehvpe edgtvllrqr itlleqeqlq
      181 lrqeiehhqq kerekpvlpa hiqqhiqale qqvrelsaqr etlsrhlasa taqaresvle
      241 rnalsheqqt rtrwreltae flrdggmlis nmpsalmldt feaedwarle qvehilaqlv
      301 qvigrihyht shtveag
//
LOCUS       WP_236038617             209 aa            linear   BCT 02-MAR-2025
DEFINITION  LLM class flavin-dependent oxidoreductase [Ktedonobacter robiniae].
ACCESSION   WP_236038617
VERSION     WP_236038617.1
KEYWORDS    RefSeq.
SOURCE      Ktedonobacter robiniae
  ORGANISM  Ktedonobacter robiniae
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012517.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00296.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Ktedonobacter robiniae"
                     /db_xref="taxon:2778365"
     Protein         1..209
                     /product="LLM class flavin-dependent oxidoreductase"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /calculated_mol_wt=23458
     Region          <4..183
                     /region_name="Flavin_utilizing_monoxygenases"
                     /note="Flavin-utilizing monoxygenases; cl19096"
                     /db_xref="CDD:450250"
ORIGIN      
        1 mtplsrrrpw kvaretvtld hlsqgrlvlp vglgaiddkg fgkvgevtdr kgraelldes
       61 ldiitglwsa qpfsyqgkhy hleemafrpg pvqqpripiw vvgawpraks inramrydgl
      121 lptkmeqdgp vtpediramr ehiagqrkqt tpfdiiwege tpgddaeqaa aivrpwaeag
      181 atwwlesrws asnieeirtr iqqgpphla
//
LOCUS       WP_236038623             105 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1254 domain-containing protein [Ktedonobacter robiniae].
ACCESSION   WP_236038623
VERSION     WP_236038623.1
KEYWORDS    RefSeq.
SOURCE      Ktedonobacter robiniae
  ORGANISM  Ktedonobacter robiniae
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018561.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06863.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Ktedonobacter robiniae"
                     /db_xref="taxon:2778365"
     Protein         1..105
                     /product="DUF1254 domain-containing protein"
                     /calculated_mol_wt=11224
     Region          <1..>102
                     /region_name="COG5361"
                     /note="Uncharacterized conserved protein [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:444136"
ORIGIN      
        1 mstgpevlhv pdmagryysv qltdswgtdf ayvgrrttgt qagnylisgp gwqgkvpdgv
       61 kqivspdnkv lligrtlves dsdlataygl akqiqltpls qwqps
//
LOCUS       WP_236038726             573 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Belnapia arida].
ACCESSION   WP_236038726
VERSION     WP_236038726.1
KEYWORDS    RefSeq.
SOURCE      Belnapia arida
  ORGANISM  Belnapia arida
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Belnapia.
REFERENCE   1  (residues 1 to 573)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 573)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 573)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 573)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Belnapia arida"
                     /db_xref="taxon:2804533"
     Protein         1..573
                     /product="ATP-binding protein"
                     /calculated_mol_wt=59132
     Region          <189..565
                     /region_name="PRK13557"
                     /note="histidine kinase; Provisional"
                     /db_xref="CDD:237425"
ORIGIN      
        1 mspggmeatt etrvlllaph grdaalaadi lgkagvpsri canlddltga itegagaall
       61 teeglarrdv lplqrwvaaq pswsdfpfil laaprfgasr gaqglawldg lgnavllerp
      121 lgaavlssav raalrargrq yqartllaey ertaaqiaal nasleervaa rtaelraear
      181 ereraeamli qaqkmevlgq laggvahdvn nvlqavlgga rmivrrpddp aavtrlagmv
      241 vdaalrgagv arrllalarr gklqvepvda hhmfaglqev lahtlggavt vhveagsdlp
      301 pvladrgqle tvlvnlavna rdaiapqaga vtfsavaeev asgephpsgl apgsylrlav
      361 addgpgmdag tlaratepff ttkprgkgtg lglsmargfa eqsggamhid salergtivt
      421 lwlpqagkav epptappaas vvaapgrtqr rcvllvddep qvrtvlaagi aerghvviqa
      481 vdaaaalarl dagepvdlli tdlampgqdg ltliraartr hpglaallit ghvgdatsml
      541 ldqaasdgpf glvhkpvmpd eladradamm saa
//
LOCUS       WP_236038731             234 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6230 family protein [Ktedonobacter robiniae].
ACCESSION   WP_236038731
VERSION     WP_236038731.1
KEYWORDS    RefSeq.
SOURCE      Ktedonobacter robiniae
  ORGANISM  Ktedonobacter robiniae
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.
REFERENCE   1  (residues 1 to 234)
  AUTHORS   Feng,Z., Ogasawara,Y., Nomura,S. and Dairi,T.
  TITLE     Biosynthetic Gene Cluster of a d-Tryptophan-Containing Lasso
            Peptide, MS-271
  JOURNAL   Chembiochem 19 (19), 2045-2048 (2018)
   PUBMED   29974638
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039694.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19741.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Ktedonobacter robiniae"
                     /db_xref="taxon:2778365"
     Protein         1..234
                     /product="DUF6230 family protein"
                     /calculated_mol_wt=24821
     Region          60..191
                     /region_name="DUF6230"
                     /note="Family of unknown function (DUF6230); pfam19741"
                     /db_xref="CDD:466168"
ORIGIN      
        1 meqkpfades lnneeqeavi gtvkpsifwt vmlvalallg gmivliskga laitvavpip
       61 vtlkaasikt tnlrlypgit pvdtsspavn qldgtlsdlv iskaialpii gnvtvtlnag
      121 qntpvtttgl ttdlsvlssd vatfegqaif nnandnafgs dtqtmtlnnv tisapyvian
      181 smtlpgltls itfqrggrql aqtplhylqt rrytrshtsl aflgafhlfd rayr
//
LOCUS       WP_236038743             159 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Ktedonobacter robiniae].
ACCESSION   WP_236038743
VERSION     WP_236038743.1
KEYWORDS    RefSeq.
SOURCE      Ktedonobacter robiniae
  ORGANISM  Ktedonobacter robiniae
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017416.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05598.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Ktedonobacter robiniae"
                     /db_xref="taxon:2778365"
     Protein         1..159
                     /product="transposase"
                     /calculated_mol_wt=18412
     Region          15..151
                     /region_name="COG3666"
                     /note="Transposase, IS1182 family [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:442883"
ORIGIN      
        1 mmgtkvrtfa pqikmslddl vpqdhfyryl dqkldlsfvr ifvqdsyaqg grpsidpvvf
       61 fklqlvmffe girserqlmr qaadrlsvrw sigydldeal pdhfsltrir alyevevfrr
      121 ffeaivdqcq qagfvwgkel yadatkvran aalswpstt
//
LOCUS       WP_236038779             370 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Belnapia arida].
ACCESSION   WP_236038779
VERSION     WP_236038779.1
KEYWORDS    RefSeq.
SOURCE      Belnapia arida
  ORGANISM  Belnapia arida
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Belnapia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Belnapia arida"
                     /db_xref="taxon:2804533"
     Protein         1..370
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=40735
     Region          36..>370
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mafsflkprt alamallaat slaplpagaq qqqrplrlvl nvglqtldpv agpsfvtrnf
       61 symvfdtlva vdsqgryrpq mldnwrtsed gltwtftlrd glefsdgaav taedcvaslr
      121 rwgardslgr rlmaatkemr vldartfvle larpfglvle algkpsvqvp fimparlaan
      181 tppttpvaev vgsgpflfvr eqwipgertv fvrnpryrpr eepadglagg kvptmervef
      241 vnmpdpglra aaiqrgevdy leyapidyir nftrdrnlvl srarggaeiv ggisinyhqp
      301 pfdnvlvrra vqqvmdrgei iaaegvptdf arpdcqslya cgtfyssetg tepmrntsia
      361 raqellrqsg
//
LOCUS       WP_236038846              88 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6510 family protein [Ktedonobacter robiniae].
ACCESSION   WP_236038846
VERSION     WP_236038846.1
KEYWORDS    RefSeq.
SOURCE      Ktedonobacter robiniae
  ORGANISM  Ktedonobacter robiniae
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040451.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20120.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Ktedonobacter robiniae"
                     /db_xref="taxon:2778365"
     Protein         1..88
                     /product="DUF6510 family protein"
                     /calculated_mol_wt=9336
     Region          2..84
                     /region_name="DUF6510"
                     /note="Family of unknown function (DUF6510); pfam20120"
                     /db_xref="CDD:437952"
ORIGIN      
        1 mmenkldgna aggilqeifp femtqaqatc tgcgatgaig alavymhgmg tvircpscdt
       61 vliriaqrrg qywldmqgvr vlqistev
//
LOCUS       WP_236038901             619 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase family 18 protein [Ktedonobacter robiniae].
ACCESSION   WP_236038901
VERSION     WP_236038901.1
KEYWORDS    RefSeq.
SOURCE      Ktedonobacter robiniae
  ORGANISM  Ktedonobacter robiniae
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.
REFERENCE   1  (residues 1 to 619)
  AUTHORS   Perrakis,A., Tews,I., Dauter,Z., Oppenheim,A.B., Chet,I.,
            Wilson,K.S. and Vorgias,C.E.
  TITLE     Crystal structure of a bacterial chitinase at 2.3 A resolution
  JOURNAL   Structure 2 (12), 1169-1180 (1994)
   PUBMED   7704527
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00704.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Ktedonobacter robiniae"
                     /db_xref="taxon:2778365"
     Protein         1..619
                     /product="glycosyl hydrolase family 18 protein"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=66216
     Region          28..441
                     /region_name="ChiA"
                     /note="Chitinase, GH18 family [Carbohydrate transport and
                     metabolism]; COG3325"
                     /db_xref="CDD:442554"
     Region          494..607
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; pfam02018"
                     /db_xref="CDD:396553"
ORIGIN      
        1 mkrrapnrfl avacivftlv msfvvthaaq aqfsptkaqa atlassnkin aayftqwgiy
       61 qrnynvkniv tsgtasklna lmyafanins syqcysgdty adyqktftad qavngvadtw
      121 nqplagnfnq lkelkalypn ikifisiggw twstnfsaaa spqnvsafvh scidqyilgn
      181 qagpgtmagi fdgididwey pndpgngnph gpqdtqnytn llkefrtqld qagaqagkhy
      241 lltvaapagq dkyqniqlnq igqyldwvdl mtydmhgawn atgptdfnap lyadpadpsa
      301 ppansysidh avtdylaagi paskivmgmp iygrgwtnvp nvnhglyqss ssmqaapgty
      361 eagiedykvl knltgytsyr npvtqvnwvy ngttfwsydd lttvatktny inskglggaf
      421 swsldgddas gsfvnavysg lgnsggstpt ptptntptkt ptpsptntpt ptptntptpt
      481 ptntptptpt pvpgnlvtnp gfesgtlsgw scdsndkvvs spvhggthal qvtptssttg
      541 ecdqaitvqp nhtytlsayv ngsyayigvq ggssnwtsss sytqlsvtft tgasqtsati
      601 yihgwyaqgn vyaddfslq
//
LOCUS       WP_236038912             113 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Belnapia arida].
ACCESSION   WP_236038912
VERSION     WP_236038912.1
KEYWORDS    RefSeq.
SOURCE      Belnapia arida
  ORGANISM  Belnapia arida
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Belnapia.
REFERENCE   1  (residues 1 to 113)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 113)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Belnapia arida"
                     /db_xref="taxon:2804533"
     Protein         1..113
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=12608
     Region          <1..109
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(61,64,87,96)
                     /site_type="active"
                     /db_xref="CDD:271175"
ORIGIN      
        1 mteqtrdsll awlihrggtl ddyvfpsrvr tgkhlstlqy arlvgewvea vglsrsaygt
       61 hnlrrtkval iykrtgnlra vqillghtkl estvrylgvd aedaltlsei tei
//
LOCUS       WP_236038840             301 aa            linear   BCT 02-MAR-2025
DEFINITION  2-deoxy-5-keto-D-gluconate 6-phosphate aldolase domain-containing
            protein [Ktedonobacter robiniae].
ACCESSION   WP_236038840
VERSION     WP_236038840.1
KEYWORDS    RefSeq.
SOURCE      Ktedonobacter robiniae
  ORGANISM  Ktedonobacter robiniae
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.
REFERENCE   1  (residues 1 to 301)
  AUTHORS   Price,M.N., Deutschbauer,A.M. and Arkin,A.P.
  TITLE     Filling gaps in bacterial catabolic pathways with computation and
            high-throughput genetics
  JOURNAL   PLoS Genet 18 (4), e1010156 (2022)
   PUBMED   35417463
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021389.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09863.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Ktedonobacter robiniae"
                     /db_xref="taxon:2778365"
     Protein         1..301
                     /product="2-deoxy-5-keto-D-gluconate 6-phosphate aldolase
                     domain-containing protein"
                     /EC_number="4.1.2.29"
                     /calculated_mol_wt=34083
     Region          9..292
                     /region_name="TIM-like beta/alpha barrel domains"
                     /note="A large family of domains similar to triose
                     phosphate isomerase (TIM) which, in general, share an
                     eight beta/alpha closed barrel structure; cl21457"
                     /db_xref="CDD:473867"
ORIGIN      
        1 mmrmtgytkk lailpfdhra syisglfgwk eplnveqalk vaeskrviye gfkkaripke
       61 eagilvdeqy gvgilreavq qgtitavpve ksgqdefdfv ygddfahhie amqptfakal
      121 vrynpegdrm lnqrqtqrlk rlsdylhqsq hlflfellvp aefhqlelvd qnkdaydsql
      181 rprlmvraie elrqagvepd vwkieglnqr adceniveaa hrnggqnvgl ivlgrgasqe
      241 rvihwlqtaa svpgfigfav grtsfwnava dfeakrlsld aaatqiaqhf eewnrcfeag
      301 r
//
LOCUS       WP_236038983             359 aa            linear   BCT 02-MAR-2025
DEFINITION  Type 1 glutamine amidotransferase-like domain-containing protein
            [Ktedonobacter robiniae].
ACCESSION   WP_236038983
VERSION     WP_236038983.1
KEYWORDS    RefSeq.
SOURCE      Ktedonobacter robiniae
  ORGANISM  Ktedonobacter robiniae
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.
REFERENCE   1  (residues 1 to 359)
  AUTHORS   Hakansson,K., Wang,A.H. and Miller,C.G.
  TITLE     The structure of aspartyl dipeptidase reveals a unique fold with a
            Ser-His-Glu catalytic triad
  JOURNAL   Proc Natl Acad Sci U S A 97 (26), 14097-14102 (2000)
   PUBMED   11106384
REFERENCE   2  (residues 1 to 359)
  AUTHORS   Lassy,R.A. and Miller,C.G.
  TITLE     Peptidase E, a peptidase specific for N-terminal aspartic
            dipeptides, is a serine hydrolase
  JOURNAL   J Bacteriol 182 (9), 2536-2543 (2000)
   PUBMED   10762256
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015534.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03575.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Ktedonobacter robiniae"
                     /db_xref="taxon:2778365"
     Protein         1..359
                     /product="Type 1 glutamine amidotransferase-like
                     domain-containing protein"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=39317
     Region          6..243
                     /region_name="GAT_1"
                     /note="Type 1 glutamine amidotransferase (GATase1)-like
                     domain; cl00020"
                     /db_xref="CDD:469582"
     Region          <293..356
                     /region_name="CysS"
                     /note="Cysteinyl-tRNA synthetase [Translation, ribosomal
                     structure and biogenesis]; COG0215"
                     /db_xref="CDD:439985"
ORIGIN      
        1 mpgqcailgs gettvvgrrv lsqmlprlee prtiavldtp agfqpnrvlv aekivqflre
       61 rlgefrpqpq rietrqeeqe setgaamlaa itharailag pgsptymire lqgttyfdai
      121 rqahangtal yvssaasiam ssyslpvyei fkvgdepswy qgldffkpfg mnlaivphwn
      181 nneggadldt sfcymgrerf skmlkqlped vvvfgideht acildfvtge vavegkggvh
      241 iiregqmvef qasesfpltl lgaeavaqgq qqalsmvgnp idvetllapg etldprieeq
      301 nlagalpapl idalvtirad lraakqwlfa drlrdtlsty giviedtpqg sqwhieeee
//
LOCUS       WP_236039031             160 aa            linear   BCT 02-MAR-2025
DEFINITION  dienelactone hydrolase family protein [Belnapia arida].
ACCESSION   WP_236039031
VERSION     WP_236039031.1
KEYWORDS    RefSeq.
SOURCE      Belnapia arida
  ORGANISM  Belnapia arida
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Belnapia.
REFERENCE   1  (residues 1 to 160)
  AUTHORS   Pathak,D. and Ollis,D.
  TITLE     Refined structure of dienelactone hydrolase at 1.8 A
  JOURNAL   J Mol Biol 214 (2), 497-525 (1990)
   PUBMED   2380986
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013866.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01738.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Belnapia arida"
                     /db_xref="taxon:2804533"
     Protein         1..160
                     /product="dienelactone hydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=17045
     Region          <9..87
                     /region_name="DLH"
                     /note="Dienelactone hydrolase [Secondary metabolites
                     biosynthesis, transport and catabolism]; COG0412"
                     /db_xref="CDD:440181"
ORIGIN      
        1 mdrfreihaa qsraryalhi afyptcnrdf rdalaiggpv riihgtaddy ipiaecrdlv
       61 grlraaghda sileisgahq vfdapargpi rlpqaqttrg cpiiretpeg tlvnsatghp
      121 ftyasdpcve rgataggdaa gleaarravr etlvaagftr
//
LOCUS       WP_236038986              97 aa            linear   BCT 02-MAR-2025
DEFINITION  isocitrate lyase/phosphoenolpyruvate mutase family protein, partial
            [Belnapia arida].
ACCESSION   WP_236038986
VERSION     WP_236038986.1
KEYWORDS    RefSeq.
SOURCE      Belnapia arida
  ORGANISM  Belnapia arida
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Belnapia.
REFERENCE   1  (residues 1 to 97)
  AUTHORS   Schwartz,D., Recktenwald,J., Pelzer,S. and Wohlleben,W.
  TITLE     Isolation and characterization of the PEP-phosphomutase and the
            phosphonopyruvate decarboxylase genes from the phosphinothricin
            tripeptide producer Streptomyces viridochromogenes Tu494
  JOURNAL   FEMS Microbiol Lett 163 (2), 149-157 (1998)
   PUBMED   9673017
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025091.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13714.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Belnapia arida"
                     /db_xref="taxon:2804533"
     Protein         1..>97
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
     Region          6..>64
                     /region_name="PrpB"
                     /note="2-Methylisocitrate lyase and related enzymes, PEP
                     mutase family [Carbohydrate transport and metabolism];
                     COG2513"
                     /db_xref="CDD:442003"
ORIGIN      
        1 mtlpdrlral laqpgfiamp avwdgisakl aaaagfqtaf lsgscvaasr lggpdldlis
       61 fgemfdsfti vvlhgsaawm hwfllvvgit rcgrtpa
//
LOCUS       WP_236039043             413 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Belnapia arida].
ACCESSION   WP_236039043
VERSION     WP_236039043.1
KEYWORDS    RefSeq.
SOURCE      Belnapia arida
  ORGANISM  Belnapia arida
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Roseomonadaceae; Belnapia.
REFERENCE   1  (residues 1 to 413)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 413)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 413)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 413)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Belnapia arida"
                     /db_xref="taxon:2804533"
     Protein         <1..413
                     /product="ATP-binding protein"
     Region          <12..397
                     /region_name="PRK13557"
                     /note="histidine kinase; Provisional"
                     /db_xref="CDD:237425"
ORIGIN      
        1 agrptgmagv vmdtterkmv eerlrqsekm eavgqltggv ahdfnnlltv vtgalsmiar
       61 apdrpdrvar laeaglqasr rgadltskll afsrrqmvrp evvdpnrlle efvpllrraa
      121 getvaieldl apdldparvd pgqleatvln lvvnardamp gggrvrietr narlsaaela
      181 dmpevapaay lqiavgdtgt gmdettrara fepffttkev gkgtglglsq vygfarqagg
      241 hvrllsapgq gttveiylpr seertpvrha edrappreat ggevvlvved epavldmave
      301 svrelgygtl aardaaeale hlqsgeridv lfsdvvmpgg vdgiqlaera rrlrpdlril
      361 ltsgysasvv gheipkglpl llkpyvredl aakltlvvge snapkesalq vgp
//
LOCUS       WP_236039064              83 aa            linear   BCT 02-MAR-2025
DEFINITION  winged helix-turn-helix domain-containing protein [Ktedonobacter
            robiniae].
ACCESSION   WP_236039064
VERSION     WP_236039064.1
KEYWORDS    RefSeq.
SOURCE      Ktedonobacter robiniae
  ORGANISM  Ktedonobacter robiniae
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.
REFERENCE   1  (residues 1 to 83)
  AUTHORS   Wietzorrek,A. and Bibb,M.
  TITLE     A novel family of proteins that regulates antibiotic production in
            streptomycetes appears to contain an OmpR-like DNA-binding fold
  JOURNAL   Mol Microbiol 25 (6), 1181-1184 (1997)
   PUBMED   9350875
REFERENCE   2  (residues 1 to 83)
  AUTHORS   Martinez-Hackert,E. and Stock,A.M.
  TITLE     The DNA-binding domain of OmpR: crystal structures of a winged
            helix transcription factor
  JOURNAL   Structure 5 (1), 109-124 (1997)
   PUBMED   9016718
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012698.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00486.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Ktedonobacter robiniae"
                     /db_xref="taxon:2778365"
     Protein         1..83
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=9603
     Region          <3..62
                     /region_name="PRK10529"
                     /note="DNA-binding transcriptional activator KdpE;
                     Provisional"
                     /db_xref="CDD:182522"
ORIGIN      
        1 meeqmlrlth iectllltlm segrkvlthq sllhavwgag yhkevdyirv ylhtlrlkle
       61 ddhggrilfp pamyscyvws ygv
//
LOCUS       WP_236039110             246 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Ktedonobacter robiniae].
ACCESSION   WP_236039110
VERSION     WP_236039110.1
KEYWORDS    RefSeq.
SOURCE      Ktedonobacter robiniae
  ORGANISM  Ktedonobacter robiniae
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.
REFERENCE   1  (residues 1 to 246)
  AUTHORS   Davies,D.R., Mahnke Braam,L., Reznikoff,W.S. and Rayment,I.
  TITLE     The three-dimensional structure of a Tn5 transposase-related
            protein determined to 2.9-A resolution
  JOURNAL   J Biol Chem 274 (17), 11904-11913 (1999)
   PUBMED   10207011
REFERENCE   2  (residues 1 to 246)
  AUTHORS   DasSarma,S.
  TITLE     Identification and analysis of the gas vesicle gene cluster on an
            unstable plasmid of Halobacterium halobium
  JOURNAL   Experientia 49 (6-7), 482-486 (1993)
   PUBMED   8335077
REFERENCE   3  (residues 1 to 246)
  AUTHORS   Ferrante,A.A. and Lessie,T.G.
  TITLE     Nucleotide sequence of IS402 from Pseudomonas cepacia
  JOURNAL   Gene 102 (1), 143-144 (1991)
   PUBMED   1650732
REFERENCE   4  (residues 1 to 246)
  AUTHORS   De Meirsman,C., Van Soom,C., Verreth,C., Van Gool,A. and
            Vanderleyden,J.
  TITLE     Nucleotide sequence analysis of IS427 and its target sites in
            Agrobacterium tumefaciens T37
  JOURNAL   Plasmid 24 (3), 227-234 (1990)
   PUBMED   1963949
REFERENCE   5  (residues 1 to 246)
  AUTHORS   Sato,S., Nakada,Y. and Shiratsuchi,A.
  TITLE     IS421, a new insertion sequence in Escherichia coli
  JOURNAL   FEBS Lett 249 (1), 21-26 (1989)
   PUBMED   2542093
REFERENCE   6  (residues 1 to 246)
  AUTHORS   Kroger,M. and Hobom,G.
  TITLE     Structural analysis of insertion sequence IS5
  JOURNAL   Nature 297 (5862), 159-162 (1982)
   PUBMED   6281654
REFERENCE   7  (residues 1 to 246)
  AUTHORS   Klaer,R., Kuhn,S., Tillmann,E., Fritz,H.J. and Starlinger,P.
  TITLE     The sequence of IS4
  JOURNAL   Mol Gen Genet 181 (2), 169-175 (1981)
   PUBMED   6268937
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01609.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Ktedonobacter robiniae"
                     /db_xref="taxon:2778365"
     Protein         1..246
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=29280
     Region          <16..216
                     /region_name="transpos_IS4_2"
                     /note="IS4 family transposase; NF033591"
                     /db_xref="CDD:468100"
ORIGIN      
        1 mpgqqqweqr lwdgveelfk rlaphighad ctiigdsafg cfpmvslcqk ygwhylfric
       61 adhtcehwsa qgrllptcpv adlvdrpgkr fygparlwqe dhietnlsac waqgeeeall
      121 iisdlpacrk rithyrwrwr vestfqdlks rgwdweeshv rrldrldrml fvlfllvwwl
      181 ahlaasclhh grrdrydrhg rrdkgmfrlg rlylldierr npsggnlrqc llfrkcddew
      241 lfslrf
//
LOCUS       WP_236039177             125 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator, partial [Ktedonobacter
            robiniae].
ACCESSION   WP_236039177
VERSION     WP_236039177.1
KEYWORDS    RefSeq.
SOURCE      Ktedonobacter robiniae
  ORGANISM  Ktedonobacter robiniae
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Ktedonobacter robiniae"
                     /db_xref="taxon:2778365"
     Protein         1..>125
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
     Region          17..107
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
ORIGIN      
        1 mcsscryech adfnasyydd iglfkpmrvd aetgyryyai dqllrlnril alkalgfelt
       61 qitacldeel spdalqgmlr lrqaklqqhi qaeqeqlahi earlkyiere gnnlshevvl
      121 kavks
//
LOCUS       WP_236039204             452 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Ktedonobacter robiniae].
ACCESSION   WP_236039204
VERSION     WP_236039204.1
KEYWORDS    RefSeq.
SOURCE      Ktedonobacter robiniae
  ORGANISM  Ktedonobacter robiniae
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024872.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13481.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Ktedonobacter robiniae"
                     /db_xref="taxon:2778365"
     Protein         1..452
                     /product="AAA family ATPase"
                     /calculated_mol_wt=49401
     Region          33..>246
                     /region_name="RepA"
                     /note="RecA-family ATPase [Replication, recombination and
                     repair]; COG3598"
                     /db_xref="CDD:442817"
ORIGIN      
        1 msatspsnql fvrplmpfts fydlvapsfl lqpwviqnll pvgltllsgd prcgktsqaq
       61 qlmldiatgt tsfgthdatl ddasqhlrpr rgsifylslt sstphlheir sriyasrpdi
      121 palsnlfvtn afkpltpgeg lqelcdwihc yadscllvid dlaslrslfp gndrellall
      181 rrlaeehqis illlhsckrs splaaqvdhh lhlkslpvsm lytlevhgnr llptsyllyc
      241 padrlsfrla sleeeraldt lsahktltre rlgllhlfde ygpiltprqv aallqldydc
      301 arqllskmvk anlltasarg ryaihpfikp lvpsllahhp flpkfdiahi padeeaevea
      361 apatiepalq eekldaepta eiatahaasd ttastsgesv shpghqgpet piahnqpspq
      421 wqasslngnv pgspgylpgy qanasqmppp ai
//
LOCUS       WP_236039398             147 aa            linear   BCT 02-MAR-2025
DEFINITION  DDE-type integrase/transposase/recombinase, partial
            [Lactiplantibacillus plantarum].
ACCESSION   WP_236039398
VERSION     WP_236039398.1
KEYWORDS    RefSeq.
SOURCE      Lactiplantibacillus plantarum
  ORGANISM  Lactiplantibacillus plantarum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactiplantibacillus.
REFERENCE   1  (residues 1 to 147)
  AUTHORS   Dyda,F., Hickman,A.B., Jenkins,T.M., Engelman,A., Craigie,R. and
            Davies,D.R.
  TITLE     Crystal structure of the catalytic domain of HIV-1 integrase:
            similarity to other polynucleotidyl transferases
  JOURNAL   Science 266 (5193), 1981-1986 (1994)
   PUBMED   7801124
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012870.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00665.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Lactiplantibacillus plantarum"
                     /db_xref="taxon:1590"
     Protein         1..>147
                     /product="DDE-type integrase/transposase/recombinase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <10..>147
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 mmnlhcdtty rtsagkmrri mrengivasi rvaqhdrkaq rkehisnnll lsdeghnfkp
       61 dkpnqvwvtd ctelcfgwkf serlrlsaik dlndhsiiaw dieetetadl vtrtfdkala
      121 isngakptvl hsdqgssyts gvfnkhl
//
LOCUS       WP_236039726             152 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF1380 family protein, partial [Enterobacteriaceae].
ACCESSION   WP_236039726
VERSION     WP_236039726.1
KEYWORDS    RefSeq.
SOURCE      Enterobacteriaceae (enterobacteria)
  ORGANISM  Enterobacteriaceae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07128.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Enterobacteriaceae"
                     /db_xref="taxon:543"
     Protein         <1..152
                     /product="DUF1380 family protein"
     Region          9..144
                     /region_name="DUF1380"
                     /note="Protein of unknown function (DUF1380); pfam07128"
                     /db_xref="CDD:429307"
ORIGIN      
        1 lkieketrmy gtcetlcrel avkypgdmpl mlviwspeei qaladgmeis ltgheirtvl
       61 arledipedq riesgissaa vmeiirnese nrlvtvpael lasliqtaeq alwkrewaar
      121 dhglavpecv trrqevvnqa rtllknnthe nd
//
LOCUS       WP_236039757             122 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Pseudomonas ogarae].
ACCESSION   WP_236039757
VERSION     WP_236039757.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas ogarae
  ORGANISM  Pseudomonas ogarae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Pseudomonas ogarae"
                     /db_xref="taxon:1114970"
     Protein         1..122
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=13761
     Region          <1..70
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mtsawngriw aaqtkekqpf kiiwdgqmyd idvwavpvga pdrvkamdfl rfatstqila
       61 dqsqyiaygp trkssqplvh admkssmptd pdnfatalqv dsqwrgdhad elnerfnawl
      121 ak
//
LOCUS       WP_236039768             492 aa            linear   BCT 02-MAR-2025
DEFINITION  YaaC family protein [Pseudomonas ogarae].
ACCESSION   WP_236039768
VERSION     WP_236039768.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas ogarae
  ORGANISM  Pseudomonas ogarae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025539.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14175.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Pseudomonas ogarae"
                     /db_xref="taxon:1114970"
     Protein         1..492
                     /product="YaaC family protein"
                     /calculated_mol_wt=54458
ORIGIN      
        1 mgilrdaanr qilkplsshg wistiaeese dgeylvivae kagkkhaval mytsatdnrh
       61 ykalegkvsq iftngqlyrv edfargisip vsyvgdffpv lvqwnseldp vkvvrkipvp
      121 tkvfrrivse splagiwshl nqlsslelar klvvrrsere gvvltdcqvq skasgiafal
      181 gnaadyykga pheslnkrvl slyygtlsla faemlatpsg padldelegm tkqghglfal
      241 asetgsfgdl nvgvlatgff pqwvsflgyd tsffpkakak tssdlentak yppqsfapms
      301 vllsaipele dlfmqvydne pawvtpymdv tdlheqrgsf ssssyislld rsqrlsevri
      361 acqdwpfael tkvktseegs vyrvrvdhpg ldfwhealll hrspylsssa lilpvlggvq
      421 eyrvtslail yslsilvrym pgswrrvegg dwdqhlgvmr avldvferil pqeflesisg
      481 envytslpgg lg
//
LOCUS       WP_236039802             422 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Pseudomonas ogarae].
ACCESSION   WP_236039802
VERSION     WP_236039802.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas ogarae
  ORGANISM  Pseudomonas ogarae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Pseudomonas ogarae"
                     /db_xref="taxon:1114970"
     Protein         1..422
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45323
     Region          7..386
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(15..16,19..20,23,53,111..112,114..116,119,135,
                     138..139,142,218,221..222,225..227,230,259,263,318..319,
                     321,325,341,344..345,348..349,352)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mwrlqwlfgw lhfvlavpsi ylllglplvm rehgwsgtei glfqltglpa vfkfllavpv
       61 qryrsaqghy rlwalglcll lalllvlasq qaitanrlll fglafaagvl atwadipvna
      121 lairllpqtq rlraggirsa alflaaivga gvmllvqqrw gwqapfllma aglllalpfl
      181 gwlqeadvna lkpqaikpar vdwagffrqp garlwiwlll sgfpflgaaw lylkplmldq
      241 gmpvqqvawv agvgggvvga lasvlgarlv qrlgparvtp wfmvgallal laltgavwlq
      301 astswlvaaa yllaaamgav sslmfglmmf fsrrhhqand yglqaslfvl trllvpigag
      361 alldrsgpag mlaglclatl gvcvlamaar rsidqatega fipvervdqa sgkrsspirs
      421 tq
//
LOCUS       WP_236039807             872 aa            linear   BCT 02-MAR-2025
DEFINITION  PD-(D/E)XK nuclease family protein [Pseudomonas ogarae].
ACCESSION   WP_236039807
VERSION     WP_236039807.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas ogarae
  ORGANISM  Pseudomonas ogarae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 872)
  AUTHORS   Kinch,L.N., Ginalski,K., Rychlewski,L. and Grishin,N.V.
  TITLE     Identification of novel restriction endonuclease-like fold families
            among hypothetical proteins
  JOURNAL   Nucleic Acids Res 33 (11), 3598-3605 (2005)
   PUBMED   15972856
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024117.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12705.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..872
                     /organism="Pseudomonas ogarae"
                     /db_xref="taxon:1114970"
     Protein         1..872
                     /product="PD-(D/E)XK nuclease family protein"
                     /calculated_mol_wt=94119
     Region          2..789
                     /region_name="AddB"
                     /note="ATP-dependent helicase/DNAse subunit B
                     [Replication, recombination and repair]; COG3857"
                     /db_xref="CDD:443066"
     Region          590..840
                     /region_name="Cas4_I-A_I-B_I-C_I-D_II-B"
                     /note="CRISPR/Cas system-associated protein Cas4; cl00641"
                     /db_xref="CDD:469855"
ORIGIN      
        1 mhitfglfld trqgpsptnf fntpivgrlg flslletylg lsapeaskar rvtiysgllr
       61 vhdnnsrfys eslkadsigt aarllawrde wrlggwdgsa npehasriqe laaiekaale
      121 tlppgeadrl hlviqalsas gpgpiksvhl vdppedfpll wrqvlerlpa vevrlpepqg
      181 egqlralqeq altvlaggsa gnltvqtdgs vllvhalaat taehwlsaqh shqpgdrlil
      241 aeeagdsldv slsatggvnc gferpsqlrp alqalilale mcwepidmnr lldflthpvg
      301 pfsrpargrl aravakqpgi gseawtaaka kiaagnnaqe vadeitfwle serwsrtdgv
      361 pvdaliarva rmkeamrlrl sgesadaasf taahsqcaav healielarq glatvlprqv
      421 eqlvahatpa gatnpaavsh vgcmrstgta aacieaadev iwwmpstpal psplpwspae
      481 vnaltqlgvq lrdparelvs lalkwlrpll aarkrfiivc pppgtevhpi rqllkklvpd
      541 iesasldldi aldstllgvt aevlapqslp atprhiqlph pvqlgdalqs fttlnelfnd
      601 aalfvlkrva kldptsvlav dednrllgil ahrvleklfa hndalslsns dalawfraea
      661 dsllltegav llmqgagvtq qhfrkvcela icslldhlrl agavqvqtev efrgtlgavp
      721 ligkidllvt lgdkrtvavd ikwrgdtyya gllrsgehlq lalysslieq tsgvapaalg
      781 yfilesggly isaadifpka qvrrppdgat vssildrara twkwrkeqld egtievvped
      841 psdefqgpeg tlpvkgpskw drdhlillgg wk
//
LOCUS       WP_236040104              90 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Pseudomonas ogarae].
ACCESSION   WP_236040104
VERSION     WP_236040104.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas ogarae
  ORGANISM  Pseudomonas ogarae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 90)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 90)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 90)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 90)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Pseudomonas ogarae"
                     /db_xref="taxon:1114970"
     Protein         <1..>90
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <6..>90
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
ORIGIN      
        1 agqalylddl fsffqiepei hsrpdaiaip qpitqgfvfe nvgfrypdae swavrhldfd
       61 lragevlalv gengagkttl vkllarlydp
//
LOCUS       WP_236040107              87 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Pseudomonas ogarae].
ACCESSION   WP_236040107
VERSION     WP_236040107.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas ogarae
  ORGANISM  Pseudomonas ogarae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 87)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Pseudomonas ogarae"
                     /db_xref="taxon:1114970"
     Protein         <1..>87
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          2..>87
                     /region_name="PRK08780"
                     /note="DNA topoisomerase I; Provisional"
                     /db_xref="CDD:181555"
ORIGIN      
        1 ghpreiagdl vdaqqarral dylvgfnlsp vlwrkvqrgl sagrvqspal rmivereeei
       61 eafiareyws idalcahpsq hfnarli
//
LOCUS       WP_236040119              77 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Pseudomonas ogarae].
ACCESSION   WP_236040119
VERSION     WP_236040119.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas ogarae
  ORGANISM  Pseudomonas ogarae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 77)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Pseudomonas ogarae"
                     /db_xref="taxon:1114970"
     Protein         <1..>77
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          1..>76
                     /region_name="LysR_substrate"
                     /note="LysR substrate binding domain; pfam03466"
                     /db_xref="CDD:460931"
ORIGIN      
        1 ypelkfslas lssdeiiagl gnnqldlgvc yldhvnpsyf effeigetrv gllydnrhfq
       61 fegnemswed aaelplg
//
LOCUS       WP_236040122             179 aa            linear   BCT 02-MAR-2025
DEFINITION  SPASM domain-containing protein, partial [Helicobacter cinaedi].
ACCESSION   WP_236040122
VERSION     WP_236040122.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter cinaedi
  ORGANISM  Helicobacter cinaedi
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 179)
  AUTHORS   Haft,D.H. and Basu,M.K.
  TITLE     Biological systems discovery in silico: radical
            S-adenosylmethionine protein families and their target peptides for
            posttranslational modification
  JOURNAL   J Bacteriol 193 (11), 2745-2755 (2011)
   PUBMED   21478363
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024584.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13186.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Helicobacter cinaedi"
                     /db_xref="taxon:213"
     Protein         <1..179
                     /product="SPASM domain-containing protein"
     Region          88..141
                     /region_name="SPASM"
                     /note="Iron-sulfur cluster-binding SPASM domain; cl41754"
                     /db_xref="CDD:477760"
ORIGIN      
        1 aseagmaafp nvifghynak dpdlfalldy akakgytsyl imampfgslk edrmtaedfk
       61 ildgirknyd vvfntwdmyd ktqtkisgcw tvnrtyitpl gevlvcpyin isignikeqs
      121 lkeildygfs ikyfgefspi cisahnfkfr ekflpedrti ftpykakeif gkedyieqc
//
LOCUS       WP_236040226             452 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase family 18 protein, partial [Klebsiella
            michiganensis].
ACCESSION   WP_236040226
VERSION     WP_236040226.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (residues 1 to 452)
  AUTHORS   Perrakis,A., Tews,I., Dauter,Z., Oppenheim,A.B., Chet,I.,
            Wilson,K.S. and Vorgias,C.E.
  TITLE     Crystal structure of a bacterial chitinase at 2.3 A resolution
  JOURNAL   Structure 2 (12), 1169-1180 (1994)
   PUBMED   7704527
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00704.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Klebsiella michiganensis"
                     /db_xref="taxon:1134687"
     Protein         <1..452
                     /product="glycosyl hydrolase family 18 protein"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <1..226
                     /region_name="ChiA"
                     /note="Chitinase, GH18 family [Carbohydrate transport and
                     metabolism]; COG3325"
                     /db_xref="CDD:442554"
     Region          <270..391
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
     Region          400..448
                     /region_name="ChiC_BD"
                     /note="Chitin-binding domain of chitinase C; cd12215"
                     /db_xref="CDD:213178"
ORIGIN      
        1 yalligelrk qldaaglsnv kisiassavv ktlgysnvna llkaglygin vmtydffgtp
       61 waesvthhtn lkaleeggwg vdtvvghlls egfpaerini gyaaytrngr naeleslspl
      121 kgtynpgtgt tvgsfesgtt ewydiiynyl dlenqkgrng fnvytdkvad adylynpdsk
      181 lfmsldtprt vkakgeyaas lglgalftwt idqdngvlvn aareglgyem asevidmepf
      241 yfeginvdpa depaepeeee edtvqpepsv nhapkaaiel mvvggsrvrl sgekssdedn
      301 deltfswgvp aainvadkta aviefdvpkv aadteytftl fvrdtwgeps tqqrfvlsvv
      361 aatqtddted epaddqdrtd dtpqpaddda vpsdettpyp lwnastvygs nwgsfeivsw
      421 kghnyqvkww sqgnqpdlnc gqfqvwsdlg ay
//
LOCUS       WP_236040505             915 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ATP-binding protein [Marinobacter].
ACCESSION   WP_236040505
VERSION     WP_236040505.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter
  ORGANISM  Marinobacter
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae.
REFERENCE   1  (residues 1 to 915)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 915)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 915)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 915)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Marinobacter"
                     /db_xref="taxon:2742"
     Protein         1..915
                     /product="ATP-binding protein"
                     /calculated_mol_wt=101711
     Region          42..254
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Region          279..497
                     /region_name="PBP2_BvgS_HisK_like"
                     /note="The type 2 periplasmic ligand-binding protein
                     domain of the sensor-kinase BvgS and histidine kinase
                     receptors, and related proteins; cd01007"
                     /db_xref="CDD:270228"
     Region          460..806
                     /region_name="BaeS"
                     /note="Signal transduction histidine kinase [Signal
                     transduction mechanisms]; COG0642"
                     /db_xref="CDD:440407"
ORIGIN      
        1 mfclllllfq gavladppqn spapvlgved lrwlaeqdgf nvgvrhtqvp lvfdtgegrm
       61 agiwvdylnr lssklglpie pflmnqmlgt erpepdlilt trlpgapvip gvrhtaplms
      121 ltygvfvnag dpairtlsdl eaakvvivgd dpnqfplldp vesftpvpvs slgeavsrvm
      181 sgeadaflgp vpvvsdyles amingvglav lldrrpvdvv lqvpieqerm frvfdrtvss
      241 lthqehrnir qswlagelpe vetrnvalta gelewlasns eitvglrpdw ppfefeqdgr
      301 ptglvadlls rlekdlgirf qrvtvdsrag aeeklksgel dvlpgmsrtp rteqeflftr
      361 ayvnvpiala irdtgrfigd lrelrdervg vvnrqashdy llinhpnldl ypqqtvedgl
      421 lalsngdldv mvthipavsy tvarlglsnl ritsitpyqy dlrlavspaq pelhrilnka
      481 lgslptsete aiynrwihld ieqeadytvv rriiliaivv vliflywnrk lslevderir
      541 senalrrsed elraakleae rlareaeaas rakseflanm sheirtpmna vigysdllyn
      601 svtdpqqrny lnairagsrs llmlindild lsrieagkmr ldfgpvsvrr llsdvrhifd
      661 lrateqgitl evsvgsgmps ammldetrlr qvlfnlvgna ikftheggvt vravakplge
      721 padadsevcy yrlvvtvadt gigiapdqqe rifeafeqqe gqssrryggt glglaisrkl
      781 vemmggrltv kseanvgstf kvvlprveat veqadddgap eeserllaqt msmhergwlr
      841 eklaedfgne wqevresgdp eqmkdfavri iewgqrhrss svtrygekll adveafnlda
      901 vntaldafpr ilgqe
//
LOCUS       WP_236040516             459 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Marinobacter nauticus].
ACCESSION   WP_236040516
VERSION     WP_236040516.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter nauticus
  ORGANISM  Marinobacter nauticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025001.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13614.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Marinobacter nauticus"
                     /db_xref="taxon:2743"
     Protein         1..459
                     /product="AAA family ATPase"
                     /calculated_mol_wt=51172
     Region          16..421
                     /region_name="PHA02519"
                     /note="plasmid partition protein SopA; Reviewed"
                     /db_xref="CDD:107201"
ORIGIN      
        1 maiedesrfd klkaaiskmh kvvkrgfsvm dqmpelvkda qkdkydpewv etsevdsriq
       61 qrrygttqaa emvgistgtl yaaeqdgrlp ppeyrtdtak kvragytvnh inhmqrvlgt
      121 apskpanlpa aicgvlnlkg gshktttchl fsqylamrgy rclvldtdpq gslsfyfgkr
      181 pdydikyent fapfileddq alreaghprg ssknlkyaiq ktywdnidii psclenlaid
      241 lllpqlmens skpktefiak lrdglrevge dydfiiidgt pslnmttlnv vsacdvvfvp
      301 tpaalldfas tlqfsklisd tarsyidmgv aphipdlryf itkfsgssya qffgqiirkv
      361 ftvergdvlt aeahasdeig kanastysiy eknpsdadnr kklkstiemy drlfaemhda
      421 laetvfgdam rgshldkide ivakagdark eirdaghae
//
LOCUS       WP_236040702             221 aa            linear   BCT 02-MAR-2025
DEFINITION  PEP-CTERM sorting domain-containing protein [Marinobacter
            nauticus].
ACCESSION   WP_236040702
VERSION     WP_236040702.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter nauticus
  ORGANISM  Marinobacter nauticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (residues 1 to 221)
  AUTHORS   Haft,D.H., Paulsen,I.T., Ward,N. and Selengut,J.D.
  TITLE     Exopolysaccharide-associated protein sorting in environmental
            organisms: the PEP-CTERM/EpsH system. Application of a novel
            phylogenetic profiling heuristic
  JOURNAL   BMC Biol 4, 29 (2006)
   PUBMED   16930487
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019225.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07589.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Marinobacter nauticus"
                     /db_xref="taxon:2743"
     Protein         1..221
                     /product="PEP-CTERM sorting domain-containing protein"
                     /calculated_mol_wt=22939
ORIGIN      
        1 mkkltqglam aaavgfagaa qaayigtvan tapaepasli psnndyangn glgtdfiptq
       61 yydttdsvll shslesvstd pfkltftylg keagytgsfl yegsevfntg tsglgdtfsa
      121 iytsglgkld fgfsslawgn pvgsvsnqgt gnlangynfs ifeagedwfi lslddnnqvd
      181 dnhddmlvmv kasqvpepgt lallglglag iavrmkgrkk a
//
LOCUS       WP_236040232             182 aa            linear   BCT 02-MAR-2025
DEFINITION  type 4 pilus major pilin, partial [Klebsiella michiganensis].
ACCESSION   WP_236040232
VERSION     WP_236040232.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (residues 1 to 182)
  AUTHORS   Xu,X.F., Tan,Y.W., Lam,L., Hackett,J., Zhang,M. and Mok,Y.K.
  TITLE     NMR structure of a type IVb pilin from Salmonella typhi and its
            assembly into pilus
  JOURNAL   J Biol Chem 279 (30), 31599-31605 (2004)
   PUBMED   15159389
REFERENCE   2  (residues 1 to 182)
  AUTHORS   Tsui,I.S., Yip,C.M., Hackett,J. and Morris,C.
  TITLE     The type IVB pili of Salmonella enterica serovar Typhi bind to the
            cystic fibrosis transmembrane conductance regulator
  JOURNAL   Infect Immun 71 (10), 6049-6050 (2003)
   PUBMED   14500527
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020384.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08805.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Klebsiella michiganensis"
                     /db_xref="taxon:1134687"
     Protein         1..>182
                     /product="type 4 pilus major pilin"
ORIGIN      
        1 mnkhnkegfs llelllvlgi vsaliisafi iypkvqtmyr vdkisktilg akssiqelyq
       61 gkayydkgvs nlrniafpan tytsknnglp lndyggtysi qgqfsvssgi ysgfsidvty
      121 vssadcqrii snvytsfqav dvsgttvfqv pikfgdrtig fdrsviseac nktenvtiqf
      181 yt
//
LOCUS       WP_236040703             701 aa            linear   BCT 02-MAR-2025
DEFINITION  VWA domain-containing protein [Marinobacter nauticus].
ACCESSION   WP_236040703
VERSION     WP_236040703.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter nauticus
  ORGANISM  Marinobacter nauticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (residues 1 to 701)
  AUTHORS   Bork,P. and Rohde,K.
  TITLE     More von Willebrand factor type A domains? Sequence similarities
            with malaria thrombospondin-related anonymous protein,
            dihydropyridine-sensitive calcium channel and inter-alpha-trypsin
            inhibitor
  JOURNAL   Biochem J 279 (Pt 3) (Pt 3), 908-910 (1991)
   PUBMED   1659389
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012321.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00092.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Marinobacter nauticus"
                     /db_xref="taxon:2743"
     Protein         1..701
                     /product="VWA domain-containing protein"
                     /calculated_mol_wt=75299
     Region          <21..203
                     /region_name="ChlD"
                     /note="vWFA (von Willebrand factor type A) domain of Mg
                     and Co chelatases [Coenzyme transport and metabolism];
                     COG1240"
                     /db_xref="CDD:440853"
     Region          524..>696
                     /region_name="PRK05901"
                     /note="RNA polymerase sigma factor; Provisional"
                     /db_xref="CDD:235640"
ORIGIN      
        1 mlliswqvca qdpalslpgn advrivvdis gsmketdpqn lrrpavrlla rtlpegasag
       61 lwtfgqyvnm lvpygvvdqs wrdtaierse qinsvalhtn lglamekaan dwlsggtlen
      121 thlivlsdgk vdvpggddas qaeekrivds llpalkdkga tihtvglsek adirflrnla
      181 retggsfqla qsaealnlaf adalntavpq eqvpiegdgf avddgiseft alifsgqdas
      241 geeplalaqp ggepftresa penvrwasep gydlitvtep vsgrwriigd lgqgsrvtvv
      301 sdlrmavnpi paefteeqpl aievaffeea ekitgsdfls vmdvslsita sdgrqgtkvl
      361 spdtppedgv yrdtvprlpa pgryqvdvva dggtfsrkfs amtmftvpge epplevvtep
      421 mvpdlseqae plpdfdggan ssepeppvea eppveapvqe sepepepepa pvvepepeap
      481 veqpiadtep ekgtllgipv wawgagaall vaivglglfa wrqkkaraeq eqaaaaeret
      541 ledlaeesde ppvvepeppv asesveaeae peadletsle qvsaeepepe sedipelsqa
      601 dsepdeipde avpevteelp saelepeedd ipladdtvsa eaepdpsead eisesefdid
      661 edefgledfd lsefddlpdy deespedeks kpadkkenpk k
//
LOCUS       WP_236040612             356 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Marinobacter nauticus].
ACCESSION   WP_236040612
VERSION     WP_236040612.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter nauticus
  ORGANISM  Marinobacter nauticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (residues 1 to 356)
  AUTHORS   Aarts,M.G., Hodge,R., Kalantidis,K., Florack,D., Wilson,Z.A.,
            Mulligan,B.J., Stiekema,W.J., Scott,R. and Pereira,A.
  TITLE     The Arabidopsis MALE STERILITY 2 protein shares similarity with
            reductases in elongation/condensation complexes
  JOURNAL   Plant J 12 (3), 615-623 (1997)
   PUBMED   9351246
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019605.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07993.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Marinobacter nauticus"
                     /db_xref="taxon:2743"
     Protein         1..356
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=38490
     Region          1..243
                     /region_name="Lys2b"
                     /note="Thioester reductase domain of alpha aminoadipate
                     reductase Lys2 and NRPSs [Secondary metabolites
                     biosynthesis, transport and catabolism]; COG3320"
                     /db_xref="CDD:442549"
ORIGIN      
        1 mtilitgatg figkylcltl lqqghdvkal trskssmtql tdfleqqgva merfsalegd
       61 lekpdlglvt lpngiecivh laarfawnlp ehearhtnvt gslrvaelar hlncrlvfit
      121 gfmlaneahl srqgiqlshp eqtdwtqvyr raggyeaskl esafrlrefv arhglnavev
      181 qpatvaghgs tgdldpaqpl yslldnlyhg rlamipgspe hwlplipvds laqliaaact
      241 athvpdtlla ldqntpnlag llqaaaqllg kpgprrhlpi gvmkallaip glpgllkvap
      301 eslafiqtcr fdtsrteqfl akqnvqlppf aeyleascrh ycqrlgvggg avtiga
//
LOCUS       WP_236040807              89 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Marinobacter nauticus].
ACCESSION   WP_236040807
VERSION     WP_236040807.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter nauticus
  ORGANISM  Marinobacter nauticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (residues 1 to 89)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Marinobacter nauticus"
                     /db_xref="taxon:2743"
     Protein         1..89
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=9720
     Region          <9..86
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mqfadvgvha lpvnvlkidq qfvqrlgqdg rdsrivsail aiaealslev vaegieteiq
       61 krklqelnch rgqgylmarp splcelpld
//
LOCUS       WP_236040575              64 aa            linear   BCT 02-MAR-2025
DEFINITION  arginine deiminase family protein, partial [Marinobacter nauticus].
ACCESSION   WP_236040575
VERSION     WP_236040575.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter nauticus
  ORGANISM  Marinobacter nauticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (residues 1 to 64)
  AUTHORS   Shirai,H. and Mizuguchi,K.
  TITLE     Prediction of the structure and function of AstA and AstB, the
            first two enzymes of the arginine succinyltransferase pathway of
            arginine catabolism
  JOURNAL   FEBS Lett 555 (3), 505-510 (2003)
   PUBMED   14675764
REFERENCE   2  (residues 1 to 64)
  AUTHORS   Shirai,H., Blundell,T.L. and Mizuguchi,K.
  TITLE     A novel superfamily of enzymes that catalyze the modification of
            guanidino groups
  JOURNAL   Trends Biochem Sci 26 (8), 465-468 (2001)
   PUBMED   11504612
REFERENCE   3  (residues 1 to 64)
  AUTHORS   D'Hooghe,I., Vander Wauven,C., Michiels,J., Tricot,C., de Wilde,P.,
            Vanderleyden,J. and Stalon,V.
  TITLE     The arginine deiminase pathway in Rhizobium etli: DNA sequence
            analysis and functional study of the arcABC genes
  JOURNAL   J Bacteriol 179 (23), 7403-7409 (1997)
   PUBMED   9393705
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014344.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02274.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..64
                     /organism="Marinobacter nauticus"
                     /db_xref="taxon:2743"
     Protein         1..>64
                     /product="arginine deiminase family protein"
     Region          1..>64
                     /region_name="DDAH_eukar"
                     /note="N,N dimethylarginine dimethylhydrolase, eukaryotic;
                     cl19186"
                     /db_xref="CDD:473146"
ORIGIN      
        1 mseptlgvhs etgtlrqviv crpglahrrl tpsncdallf ddvfwvkqaq kdhdvfsglm
       61 rarg
//
LOCUS       WP_236040918             130 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Helicobacter
            cinaedi].
ACCESSION   WP_236040918
VERSION     WP_236040918.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter cinaedi
  ORGANISM  Helicobacter cinaedi
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 130)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Helicobacter cinaedi"
                     /db_xref="taxon:213"
     Protein         <1..>130
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          3..>128
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            65..98
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 kalaeavnnl tnltnsqass leqtaqavee itssmqnvsg ktseviqqse diknvigiir
       61 diadqtnlla lnaaieaara gehgrgfavv adevrklaer tqkslgeiea ntnllvqsin
      121 dmgesireqt
//
LOCUS       WP_236041118             287 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: serine hydrolase [unclassified Streptomyces].
ACCESSION   WP_236041118
VERSION     WP_236041118.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 287)
  AUTHORS   Urbach,C., Evrard,C., Pudzaitis,V., Fastrez,J., Soumillion,P. and
            Declercq,J.P.
  TITLE     Structure of PBP-A from Thermosynechococcus elongatus, a
            penicillin-binding protein closely related to class A
            beta-lactamases
  JOURNAL   J Mol Biol 386 (1), 109-120 (2009)
   PUBMED   19100272
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024748.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13354.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..287
                     /product="serine hydrolase"
                     /GO_function="GO:0008800 - beta-lactamase activity
                     [Evidence IEA]"
                     /GO_process="GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=30375
     Region          22..259
                     /region_name="PenP"
                     /note="Beta-lactamase class A [Defense mechanisms];
                     COG2367"
                     /db_xref="CDD:441934"
ORIGIN      
        1 mlvpfvaaat pavaatptvs ctsgkaglaa klqkditsal agrtgtvavg lydrstnttc
       61 slrgtsayds asvvkvtvla tllwdaknhn ryltsretsl atamitksdn natstlwkql
      121 gltkikgfla aagmtqtkpg angywgltqi tvqdeqkllk lltaknsvls dnsrayelkl
      181 manvissqrw gtpagapsgv avhvkngwlq rsthgwrvhs vgtfngrghd ymitvltwdn
      241 stmnygvtti qnvarvihrd lvpttsttst fvptstpqea ypaapas
//
LOCUS       WP_236041154             199 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: Rv3235 family protein [unclassified Streptomyces].
ACCESSION   WP_236041154
VERSION     WP_236041154.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039460.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20060.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..199
                     /product="Rv3235 family protein"
                     /calculated_mol_wt=20984
     Region          84..189
                     /region_name="DUF6459"
                     /note="Family of unknown function (DUF6459); pfam20060"
                     /db_xref="CDD:466277"
ORIGIN      
        1 mtrtkpapga rppvrhdtrr pggaprraep grgpsraral qrpsttsaga tsteaasasa
       61 asgsapsata vpppeqaaqg plrpvphvrp tdvfadrlls vlsgqrpvhs mlrhtvgray
      121 ddlarlaerg plrtrgtrpv vrdigyyvpr pgaieafari gagdqlrama frlecgrdhr
      181 wrctavelgg praphgdgv
//
LOCUS       WP_236041225             291 aa            linear   BCT 02-MAR-2025
DEFINITION  lantibiotic dehydratase [Streptomyces sp. Y2F8-2].
ACCESSION   WP_236041225
VERSION     WP_236041225.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Y2F8-2
  ORGANISM  Streptomyces sp. Y2F8-2
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 291)
  AUTHORS   Ortega,M.A., Hao,Y., Zhang,Q., Walker,M.C., van der Donk,W.A. and
            Nair,S.K.
  TITLE     Structure and mechanism of the tRNA-dependent lantibiotic
            dehydratase NisB
  JOURNAL   Nature 517 (7535), 509-512 (2015)
   PUBMED   25363770
REFERENCE   2  (residues 1 to 291)
  AUTHORS   Xie,L., Chatterjee,C., Balsara,R., Okeley,N.M. and van der
            Donk,W.A.
  TITLE     Heterologous expression and purification of SpaB involved in
            subtilin biosynthesis
  JOURNAL   Biochem Biophys Res Commun 295 (4), 952-957 (2002)
   PUBMED   12127987
REFERENCE   3  (residues 1 to 291)
  AUTHORS   Karakas Sen,A., Narbad,A., Horn,N., Dodd,H.M., Parr,A.J.,
            Colquhoun,I. and Gasson,M.J.
  TITLE     Post-translational modification of nisin. The involvement of NisB
            in the dehydration process
  JOURNAL   Eur J Biochem 261 (2), 524-532 (1999)
   PUBMED   10215865
REFERENCE   4  (residues 1 to 291)
  AUTHORS   Klein,C., Kaletta,C., Schnell,N. and Entian,K.D.
  TITLE     Analysis of genes involved in biosynthesis of the lantibiotic
            subtilin
  JOURNAL   Appl Environ Microbiol 58 (1), 132-142 (1992)
   PUBMED   1539969
  REMARK    Erratum:[Appl Environ Microbiol 1992 May;58(5):1795]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016615.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04738.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Streptomyces sp. Y2F8-2"
                     /db_xref="taxon:2759675"
     Protein         1..291
                     /product="lantibiotic dehydratase"
                     /calculated_mol_wt=31396
     Region          28..>291
                     /region_name="Lant_dehydr_N"
                     /note="Lantibiotic dehydratase, N terminus; pfam04738"
                     /db_xref="CDD:428098"
ORIGIN      
        1 mpltslpgww pnpsdtdgcg rwlkqvwada rfadavrqas gdlaarvdvi cagqparpkq
       61 vrraamaavr yvlratgrpt pfglfagvap vrvgstpyar wgvahravar vdtewlddvi
      121 vrleacpall erldvvlnnl aarrggrlhv phggpmgatv rrttavrvie dlargpvhfa
      181 alaeqlaasf prtepqnigt llgalvrekf litglrapma dtdplsrlie rlhgadagtv
      241 peaaqilqel eavqravheh nrrpastqgp vreelagrlr rlseagrspl a
//
LOCUS       WP_236041241             208 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6286 domain-containing protein [Streptomyces sp. Y2F8-2].
ACCESSION   WP_236041241
VERSION     WP_236041241.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Y2F8-2
  ORGANISM  Streptomyces sp. Y2F8-2
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039399.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19803.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Streptomyces sp. Y2F8-2"
                     /db_xref="taxon:2759675"
     Protein         1..208
                     /product="DUF6286 domain-containing protein"
                     /calculated_mol_wt=22713
     Region          102..204
                     /region_name="DUF6286"
                     /note="Family of unknown function (DUF6286); pfam19803"
                     /db_xref="CDD:466194"
ORIGIN      
        1 mpltkepdpp erdmstsdlt ageregghrt rrkwsarsvt aalvaavilv aavaalvdvv
       61 avragrpaaa wrrhladela trpvddvwml tgaavaaavg vwlivlaltp gqrrwlplrs
      121 pagcprlraf vdrdgaavll rdaamrvpgv gaahvrvgrh rikaraevrf reprqvkddl
      181 tavldeerdr lalarppria vrtrrrtr
//
LOCUS       WP_236041284             214 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase [Streptomyces sp. Y2F8-2].
ACCESSION   WP_236041284
VERSION     WP_236041284.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Y2F8-2
  ORGANISM  Streptomyces sp. Y2F8-2
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 214)
  AUTHORS   Zheng,M., Ginalski,K., Rychlewski,L. and Grishin,N.V.
  TITLE     Protein domain of unknown function DUF1023 is an alpha/beta
            hydrolase
  JOURNAL   Proteins 59 (1), 1-6 (2005)
   PUBMED   15688435
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018018.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06259.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Streptomyces sp. Y2F8-2"
                     /db_xref="taxon:2759675"
     Protein         1..214
                     /product="alpha/beta hydrolase"
                     /calculated_mol_wt=22289
     Region          <4..149
                     /region_name="Abhydrolase_8"
                     /note="Alpha/beta hydrolase; pfam06259"
                     /db_xref="CDD:283837"
ORIGIN      
        1 mdstrgqler vsklqdsage adptadtamv ywlgydapei piseannldv agpgraedga
       61 qdlrdfthgl rashegeran ltvlghsygs tavgaaaagd dgldadniav vgspgmtvdr
      121 aeelnidpsh vcvglaeddp vrdaqdlsvg hnvtsdyfga trfetdtsgh sgywdenseg
      181 mskslanqgr iiagrqpsay spppsmpaqp pghl
//
LOCUS       WP_236041408             427 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Streptomyces sp. Y2F8-2].
ACCESSION   WP_236041408
VERSION     WP_236041408.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Y2F8-2
  ORGANISM  Streptomyces sp. Y2F8-2
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Streptomyces sp. Y2F8-2"
                     /db_xref="taxon:2759675"
     Protein         1..427
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=42706
     Region          24..391
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(33..34,37..38,41,73,128..129,131..133,136,157,
                     160..161,164,235,238..239,242..244,247,270,274,327..328,
                     332,336,352,355..356,359..360,363)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mstppsaacv rpsyaavlra phvrrtlaas lvarlsygta plsvmlavtr asgsyavagt
       61 vlalfgattv llsplraafv drygprrall tmallyacvl cllavvsrrp gapapllgal
      121 gaaagvfppp lgptvravws alfddrrlvq raygldavve eltfvagpll vgttvryapp
      181 aagvalsall vtagtiafvt spgvarvrpp agsqvrlmrg rlrdarglaq pvlvaagagl
      241 avgaldllvm afaeqrghgd dvvawvlaal sagsavggll ngavewrgsa rvrlpllgag
      301 lglavaaagl apglgvltaa vicaglfiap alttsyllad esspadfrtq agawvnmavn
      361 ggisagsaav gallghlplg wcfavsgavt vaaaglaagg cprarrgagr gitrlgrrga
      421 tshrarr
//
LOCUS       WP_236041609              52 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: glycerate kinase [unclassified Streptomyces].
ACCESSION   WP_236041609
VERSION     WP_236041609.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 52)
  AUTHORS   Cusa,E., Obradors,N., Baldoma,L., Badia,J. and Aguilar,J.
  TITLE     Genetic analysis of a chromosomal region containing genes required
            for assimilation of allantoin nitrogen and linked glyoxylate
            metabolism in Escherichia coli
  JOURNAL   J Bacteriol 181 (24), 7479-7484 (1999)
   PUBMED   10601204
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014634.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02595.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..52
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..52
                     /product="glycerate kinase"
                     /GO_function="GO:0008887 - glycerate kinase activity
                     [Evidence IEA]"
                     /GO_process="GO:0031388 - organic acid phosphorylation
                     [Evidence IEA]"
                     /calculated_mol_wt=5108
     Region          4..>52
                     /region_name="GlxK"
                     /note="Glycerate kinase [Carbohydrate transport and
                     metabolism]; COG1929"
                     /db_xref="CDD:441532"
ORIGIN      
        1 mvsvliapdk fkgslsadev aralehglle aapharvsrl apadggegsv aa
//
LOCUS       WP_236041604             361 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6397 family protein [Streptomyces sp. Y2F8-2].
ACCESSION   WP_236041604
VERSION     WP_236041604.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Y2F8-2
  ORGANISM  Streptomyces sp. Y2F8-2
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 361)
  AUTHORS   Schwartz,D., Berger,S., Heinzelmann,E., Muschko,K., Welzel,K. and
            Wohlleben,W.
  TITLE     Biosynthetic gene cluster of the herbicide phosphinothricin
            tripeptide from Streptomyces viridochromogenes Tu494
  JOURNAL   Appl Environ Microbiol 70 (12), 7093-7102 (2004)
   PUBMED   15574905
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040401.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19934.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Streptomyces sp. Y2F8-2"
                     /db_xref="taxon:2759675"
     Protein         1..361
                     /product="DUF6397 family protein"
                     /calculated_mol_wt=39528
     Region          30..269
                     /region_name="DUF6397"
                     /note="Family of unknown function (DUF6397); pfam19934"
                     /db_xref="CDD:466236"
ORIGIN      
        1 mpghtitpvi aettaaadit srlpslalsr aarelglrrg eldlavqlgc lrtvpddrgg
       61 grritraeid rvrceegfpe tlrervatvg trdgaalmdv tparftrfar lglivpvkwy
      121 lnryravvwl ylaeevqqfa sgeanapllt grtpeglrdq ldagldlrpr nwrgrhlgfr
      181 lrltddpwak aavvaslldp ahvadvvrdp neraelyrlr paqsvqwppd spaariaari
      241 miaedpdevg wlradlgral iearrerpas wlspgvpdde rrpvtvhrpa pvhgagaatv
      301 cgnttvhrat dvgrtaslte tvvpgepvth ngtapdrqam agrdeqapsr gvlgwlrrrn
      361 p
//
LOCUS       WP_236041832             237 aa            linear   BCT 02-MAR-2025
DEFINITION  (2Fe-2S)-binding protein [Streptomyces sp. Y2F8-2].
ACCESSION   WP_236041832
VERSION     WP_236041832.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Y2F8-2
  ORGANISM  Streptomyces sp. Y2F8-2
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 237)
  AUTHORS   Muller,K., Matzanke,B.F., Schunemann,V., Trautwein,A.X. and
            Hantke,K.
  TITLE     FhuF, an iron-regulated protein of Escherichia coli with a new type
            of [2Fe-2S] center
  JOURNAL   Eur J Biochem 258 (3), 1001-1008 (1998)
   PUBMED   9990318
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023007.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11575.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Streptomyces sp. Y2F8-2"
                     /db_xref="taxon:2759675"
     Protein         1..237
                     /product="(2Fe-2S)-binding protein"
                     /GO_function="GO:0051537 - 2 iron, 2 sulfur cluster
                     binding [Evidence IEA]"
                     /calculated_mol_wt=24974
     Region          68..229
                     /region_name="FhuF"
                     /note="Ferric iron reductase protein FhuF, involved in
                     iron transport [Inorganic ion transport and metabolism];
                     COG4114"
                     /db_xref="CDD:443290"
ORIGIN      
        1 mdledidpdl salgalggff vlrtgapprg alptlaqaya seppeggadp laerirkvah
       61 slrapeprva aslahqglaa riwsvalgsa alygrvpdld pqllrwdpeg gvpddlwlse
      121 vrplpvasld avvreghlap lmavlsarhg vsarllwgna gsalagtvrm idrwaretgr
      181 tdvgerarsl aaglfahpdl sgtldpagrr rscclyyrlp agglcgdccf drppgre
//
LOCUS       WP_236041868             102 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: suppressor of fused domain protein [unclassified
            Streptomyces].
ACCESSION   WP_236041868
VERSION     WP_236041868.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 102)
  AUTHORS   Zhang,D., Iyer,L.M. and Aravind,L.
  TITLE     A novel immunity system for bacterial nucleic acid degrading toxins
            and its recruitment in various eukaryotic and DNA viral systems
  JOURNAL   Nucleic Acids Res 39 (11), 4532-4552 (2011)
   PUBMED   21306995
REFERENCE   2  (residues 1 to 102)
  AUTHORS   Rubin,J.B. and Rowitch,D.H.
  TITLE     Medulloblastoma: a problem of developmental biology
  JOURNAL   Cancer Cell 2 (1), 7-8 (2002)
   PUBMED   12150819
REFERENCE   3  (residues 1 to 102)
  AUTHORS   Taylor,M.D., Liu,L., Raffel,C., Hui,C.C., Mainprize,T.G., Zhang,X.,
            Agatep,R., Chiappa,S., Gao,L., Lowrance,A., Hao,A., Goldstein,A.M.,
            Stavrou,T., Scherer,S.W., Dura,W.T., Wainwright,B., Squire,J.A.,
            Rutka,J.T. and Hogg,D.
  TITLE     Mutations in SUFU predispose to medulloblastoma
  JOURNAL   Nat Genet 31 (3), 306-310 (2002)
   PUBMED   12068298
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016932.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05076.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..102
                     /product="suppressor of fused domain protein"
                     /calculated_mol_wt=11186
     Region          <18..99
                     /region_name="SUFU"
                     /note="Suppressor of fused protein (SUFU); pfam05076"
                     /db_xref="CDD:461543"
ORIGIN      
        1 mtafyhcggp ephrldlghs lpmgepwtpg stcehllvsl sylhgpdler calpdgharl
       61 lwllpvtase iafrrkhgte aleqlfdeae inpvdprkpa vv
//
LOCUS       WP_236042021             142 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-dependent oxidoreductase [Klebsiella pneumoniae].
ACCESSION   WP_236042021
VERSION     WP_236042021.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 142)
  AUTHORS   Li,R., Bianchet,M.A., Talalay,P. and Amzel,L.M.
  TITLE     The three-dimensional structure of NAD(P)H:quinone reductase, a
            flavoprotein involved in cancer chemoprotection and chemotherapy:
            mechanism of the two-electron reduction
  JOURNAL   Proc Natl Acad Sci U S A 92 (19), 8846-8850 (1995)
   PUBMED   7568029
  REMARK    Erratum:[Proc Natl Acad Sci U S A 1995 Nov 7;92(23):10815]
REFERENCE   2  (residues 1 to 142)
  AUTHORS   Fischl,A.S. and Kennedy,E.P.
  TITLE     Isolation and properties of acyl carrier protein phosphodiesterase
            of Escherichia coli
  JOURNAL   J Bacteriol 172 (9), 5445-5449 (1990)
   PUBMED   2168383
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014573.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02525.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..142
                     /product="NAD(P)H-dependent oxidoreductase"
                     /calculated_mol_wt=15590
     Region          9..>114
                     /region_name="FMN_red"
                     /note="NADPH-dependent FMN reductase; cl00438"
                     /db_xref="CDD:469770"
ORIGIN      
        1 mkttvfvthp ninqsrvnsa lakgaasltd vevrylydqy pdgkidvaae qaalektdri
       61 vlqfpmqwys tppllkqwld dvltygwshg getqalrdkq lmlavslgga esayqpdgaa
      121 ghtvggkrrl stvwqilifl rg
//
LOCUS       WP_236041888             573 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: BACON domain-containing protein [unclassified
            Streptomyces].
ACCESSION   WP_236041888
VERSION     WP_236041888.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 573)
  AUTHORS   Jonge,P.A., Meijenfeldt,F.A.B.V., Rooijen,L.E.V., Brouns,S.J.J. and
            Dutilh,B.E.
  TITLE     Evolution of BACON Domain Tandem Repeats in crAssphage and Novel
            Gut Bacteriophage Lineages
  JOURNAL   Viruses 11 (12), 1085 (2019)
   PUBMED   31766550
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040218.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19190.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..573
                     /product="BACON domain-containing protein"
                     /calculated_mol_wt=59703
     Region          <91..204
                     /region_name="RpoE"
                     /note="DNA-directed RNA polymerase specialized sigma
                     subunit, sigma24 family [Transcription]; COG1595"
                     /db_xref="CDD:441203"
     Region          <165..572
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          <435..>478
                     /region_name="BACON_2"
                     /note="Viral BACON domain; pfam19190"
                     /db_xref="CDD:408960"
ORIGIN      
        1 mssrpeisth aagahparnd arqrgsaprg atprtpaqrl parydpyvdg lftyclsvlc
       61 dhdaateala dalalaerrg trgprshddh rawlyalarw sclrrlaear rhrragrgrd
      121 lgahkeaadr raaaalgttp epadetqerr rrelaqlawp eaagttpeqr ealelavrhq
      181 laprevaavl gldptatrel laaaacever traalavvet gtcpgvarlt gdhrlvlsaa
      241 lrrelvrhvd dcprcrrtae ravpgtwpgt svtpaalpvl qapraalhts mtraarargg
      301 aprfdrrgfp mdpkdhaarr drlraravtt tvvatvvaap vfalwaayrg pltgeaadgr
      361 patarevqgt aplggegagg yenagnasar pgarlpgkdg rtpdvsvevi gvstgapgeg
      421 rlavtarndg tttlitltas gsspvhwsat sgaswlymsq ssgtldpgas stirvyvdhl
      481 repsgpwhaq vavapagavv sidghgaagp seprptptrt vpsdpsptgp ppgsdptpgd
      541 ptptdpptsg pspsdppass ppptdsgaps pas
//
LOCUS       WP_236042231             372 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: LysR substrate-binding domain-containing protein
            [Alphaproteobacteria].
ACCESSION   WP_236042231
VERSION     WP_236042231.1
KEYWORDS    RefSeq.
SOURCE      Alphaproteobacteria (a-proteobacteria)
  ORGANISM  Alphaproteobacteria
            Bacteria; Pseudomonadati; Pseudomonadota.
REFERENCE   1  (residues 1 to 372)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Alphaproteobacteria"
                     /db_xref="taxon:28211"
     Protein         1..372
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=41485
     Region          51..345
                     /region_name="PRK10082"
                     /note="hypochlorite stress DNA-binding transcriptional
                     regulator HypT"
                     /db_xref="CDD:182228"
ORIGIN      
        1 msigfplnsd salnrmpfgr ayfcangrgs fagclilfid elckncmesi leliwmedfl
       61 eivasrnyst aaaarnisqp afsrrikale rwvgvelidr stypvqltka gtlflprcqe
      121 lvrelyrlrn dcqqqagtrq npvsfsalht ialfffpewi kgadasrsll pvsmqatdfy
      181 ecvealamgr sdfaivyshp egppvltagp fesvclgidp lvpvsaldae srplysldhd
      241 qesripylay swndgylgkl vsliharqer plplatvyet sisegikrmv mageglgwlp
      301 lccvrdaier gelcqiggpe lqldmevrlf rrqgsrsphl etfwhgiepa itpwetrrta
      361 drqdlagpaa ae
//
LOCUS       WP_236042247             213 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Tritonibacter
            mobilis].
ACCESSION   WP_236042247
VERSION     WP_236042247.1
KEYWORDS    RefSeq.
SOURCE      Tritonibacter mobilis
  ORGANISM  Tritonibacter mobilis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Tritonibacter.
REFERENCE   1  (residues 1 to 213)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 213)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 213)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 213)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Tritonibacter mobilis"
                     /db_xref="taxon:379347"
     Protein         1..213
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=22092
     Region          5..213
                     /region_name="YnjD"
                     /note="ABC-type uncharacterized transport system YnjBCD,
                     ATPase component [General function prediction only];
                     COG4136"
                     /db_xref="CDD:443311"
ORIGIN      
        1 mteaglfidr vtialegrei vsltrrvapg gvltvmgpsg agkstllayi ggfldpvfsa
       61 rgrvfvdgte vtalkpedrh vgvlfqdpll fphmsvggnl mfalpeavrg raaraarvaq
      121 alegvglagl eardpatlsg gqkarvalar vlassprall ldepfsklda elraqtrelv
      181 fskacdsglp vllvthdead aeaaggdivr iga
//
LOCUS       WP_236042303            1323 aa            linear   BCT 02-MAR-2025
DEFINITION  autotransporter domain-containing protein [Nitratireductor
            aquimarinus].
ACCESSION   WP_236042303
VERSION     WP_236042303.1
KEYWORDS    RefSeq.
SOURCE      Nitratireductor aquimarinus
  ORGANISM  Nitratireductor aquimarinus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Nitratireductor.
REFERENCE   1  (residues 1 to 1323)
  AUTHORS   Oomen,C.J., van Ulsen,P., van Gelder,P., Feijen,M., Tommassen,J.
            and Gros,P.
  TITLE     Structure of the translocator domain of a bacterial autotransporter
  JOURNAL   EMBO J 23 (6), 1257-1266 (2004)
   PUBMED   15014442
REFERENCE   2  (residues 1 to 1323)
  AUTHORS   Veiga,E., Sugawara,E., Nikaido,H., de Lorenzo,V. and Fernandez,L.A.
  TITLE     Export of autotransported proteins proceeds through an oligomeric
            ring shaped by C-terminal domains
  JOURNAL   EMBO J 21 (9), 2122-2131 (2002)
   PUBMED   11980709
REFERENCE   3  (residues 1 to 1323)
  AUTHORS   Henderson,I.R., Navarro-Garcia,F. and Nataro,J.P.
  TITLE     The great escape: structure and function of the autotransporter
            proteins
  JOURNAL   Trends Microbiol 6 (9), 370-378 (1998)
   PUBMED   9778731
REFERENCE   4  (residues 1 to 1323)
  AUTHORS   Pohlner,J., Halter,R., Beyreuther,K. and Meyer,T.F.
  TITLE     Gene structure and extracellular secretion of Neisseria gonorrhoeae
            IgA protease
  JOURNAL   Nature 325 (6103), 458-462 (1987)
   PUBMED   3027577
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015737.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03797.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1323
                     /organism="Nitratireductor aquimarinus"
                     /db_xref="taxon:889300"
     Protein         1..1323
                     /product="autotransporter domain-containing protein"
                     /calculated_mol_wt=130629
     Region          14..67
                     /region_name="rpt_T5SS_PEPC"
                     /note="T5SS/PEP-CTERM-associated repeat; TIGR04393"
                     /db_xref="CDD:275186"
     Region          70..>562
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          390..1323
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
ORIGIN      
        1 mltvedggtv ssergvigfa sgvsgsaevs gkssggpast wtmtdrlfvg eagtgtltie
       61 dggivkntlg eigkstgseg tatvsgdgsi wknsdelyvg fdgngtldid lggaventng
      121 yigtsfgses ivtvsgagsr wvndgsldig lrgkgtltvk dggtvsantg sggsgpgvvy
      181 lgsdlsadgv invgaalgsq aeaagtlqtd diifgdgsgt lnfkhtgatt fsaalessga
      241 gthtvnhaag ttmltgdssa ftgtttvsgg tlligdaagn gtlggvvnvg mngalggsgt
      301 lngavtidgt laagnspgtl tfnndltlna gstsvfelns pgvaggagnd lvrvngalal
      361 ngtldarvaa agyyrlfeyv gpqsgafvdg tvtgtggfaa adpnnpdiry dipgqvnlsv
      421 lgtgqtmqfw dgagtaanga vdggsgvwqs fatnwtdatg sanagwggsv gvfagsagtv
      481 tvqgaqvfdt lqfstddyri qgdalsigaa gggtfnidgg vtttvasiie dgagkvvrka
      541 gggtlvlsga nthsggvdll ggvlsvasdq nlgaapgglr fdggvlkvtg tgytgtardi
      601 liggdgggfd iadadntfsl sqditgtgdl lkkgdgtlvl ggtngyrdtl veagtlagna
      661 gsisgdigng atvvfdqagd asfsgnigsl ngtegamikr gagvltlsga stlgwsvetg
      721 glvtdagrfa gdvdiasgas lnfdqntatn yagvlsgagg fsvigsgavt ligdssgftg
      781 ltsfsngsli vgtaaggalg gsimlgpdsq lggtgtigaa gstvtitagg thapgnsigv
      841 qtitgnyvnh gmlaievtpt aadkvivqgt vdisgatlal tgtpltaadw pilngpyiil
      901 dnqgagavag tfasvtnnll fldetvdyag gdgndislel trndtsfadv aqtrnqrata
      961 aaadtlptsn aiwqaligmt dedtvrasfd alsgeihasa ksaliedsrf vrnaindrir
     1021 aafgdvgasv tpvlvygsgg patlvaadha gpalwsqgfg swgstdsdgn aaslhrksgg
     1081 lligtdgrlg dwrvgllagy shssfdvadr assgssenyh lglyggtqwg dfafrtgaay
     1141 swheidtqrs vaipglresl sagysagtvq afgelgygfd mgngaryepf anlahvslrt
     1201 ngfsetggna altgqhvssd vtfttlglrg eyavtlgamd atfngmlgwr hafgdttpts
     1261 vhafsesdaf siagapiarn savieagldl dltsdatlgl sytgqiaaga qdhgfkanln
     1321 vrf
//
LOCUS       WP_236042325             235 aa            linear   BCT 02-MAR-2025
DEFINITION  protein phosphatase CheZ [Roseibium aggregatum].
ACCESSION   WP_236042325
VERSION     WP_236042325.1
KEYWORDS    RefSeq.
SOURCE      Roseibium aggregatum
  ORGANISM  Roseibium aggregatum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Roseibium.
REFERENCE   1  (residues 1 to 235)
  AUTHORS   Zhao,R., Collins,E.J., Bourret,R.B. and Silversmith,R.E.
  TITLE     Structure and catalytic mechanism of the E. coli chemotaxis
            phosphatase CheZ
  JOURNAL   Nat Struct Biol 9 (8), 570-575 (2002)
   PUBMED   12080332
  REMARK    Erratum:[Nat Struct Biol 2002 Sep;9(9):711]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016247.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04344.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Roseibium aggregatum"
                     /db_xref="taxon:187304"
     Protein         1..235
                     /product="protein phosphatase CheZ"
                     /EC_number="3.6.1.-"
                     /GO_component="GO:0009288 - bacterial-type flagellum
                     [Evidence IEA]"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_process="GO:0050920 - regulation of chemotaxis
                     [Evidence IEA]"
                     /calculated_mol_wt=25825
     Region          65..235
                     /region_name="CheZ"
                     /note="Phosphoaspartate phosphatase CheZ, dephosphorylates
                     CheY;
                     P [Cell motility, Signal transduction mechanisms];
                     COG3143"
                     /db_xref="CDD:442377"
ORIGIN      
        1 mhsgaqedpl fveerrhqei leeiaglksm irkggggsqq avdpqemsek fmsefrkels
       61 eaaklkveld siyeaiaqtk keiatlhvtt gskgeemtrv tneldavvvg tegaterils
      121 aaefidetan tlsgrvdrdd agltsdiqeq vvqifeacnf qdltgqritk vvatlrfved
      181 riiqmmdiwg gietfkdiev derevkegda allngpsles dvdvasqddi dalfa
//
LOCUS       WP_236042341             166 aa            linear   BCT 02-MAR-2025
DEFINITION  PEGA domain-containing protein [Roseibium aggregatum].
ACCESSION   WP_236042341
VERSION     WP_236042341.1
KEYWORDS    RefSeq.
SOURCE      Roseibium aggregatum
  ORGANISM  Roseibium aggregatum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Roseibium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019911.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08308.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Roseibium aggregatum"
                     /db_xref="taxon:187304"
     Protein         1..166
                     /product="PEGA domain-containing protein"
                     /calculated_mol_wt=16827
     Region          1..>37
                     /region_name="NlpA"
                     /note="ABC-type metal ion transport system, periplasmic
                     component/surface antigen [Inorganic ion transport and
                     metabolism]; COG1464"
                     /db_xref="CDD:441073"
     Region          30..>82
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
ORIGIN      
        1 mkkflltvav laasaglsac asvtrgttet vkiyaspega qiatnigltc ttspcslevl
       61 rktefsvivs kegyntqtvr vttavapggv agiagnvlvg gvigvgidaa sgatldhkpn
      121 pvlvelvpln pkdpdtpkgd lsevrdeiaa krraqeeaam rsrggv
//
LOCUS       WP_236042651             289 aa            linear   BCT 02-MAR-2025
DEFINITION  methylenetetrahydrofolate reductase [Roseibium aggregatum].
ACCESSION   WP_236042651
VERSION     WP_236042651.1
KEYWORDS    RefSeq.
SOURCE      Roseibium aggregatum
  ORGANISM  Roseibium aggregatum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Roseibium.
REFERENCE   1  (residues 1 to 289)
  AUTHORS   Guenther,B.D., Sheppard,C.A., Tran,P., Rozen,R., Matthews,R.G. and
            Ludwig,M.L.
  TITLE     The structure and properties of methylenetetrahydrofolate reductase
            from Escherichia coli suggest how folate ameliorates human
            hyperhomocysteinemia
  JOURNAL   Nat Struct Biol 6 (4), 359-365 (1999)
   PUBMED   10201405
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02219.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Roseibium aggregatum"
                     /db_xref="taxon:187304"
     Protein         1..289
                     /product="methylenetetrahydrofolate reductase"
                     /EC_number="1.5.1.20"
                     /GO_function="GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA]"
                     /GO_process="GO:0006555 - methionine metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=32102
     Region          14..281
                     /region_name="MTHFR"
                     /note="Methylenetetrahydrofolate reductase (MTHFR).
                     5,10-Methylenetetrahydrofolate is reduced to
                     5-methyltetrahydrofolate by methylenetetrahydrofolate
                     reductase, a cytoplasmic, NAD(P)-dependent enzyme.
                     5-methyltetrahydrofolate is utilized by methionine
                     synthase...; cl00246"
                     /db_xref="CDD:444783"
     Site            order(40,69,100..102,113..114,134,136,140,142,155,158,
                     164..165,173,175,269)
                     /site_type="other"
                     /note="FAD binding site [chemical binding]"
                     /db_xref="CDD:238299"
ORIGIN      
        1 msrdsavgdl vrgysievlp rtaakiddfk allpegtcvy ianvegtdfe dmlltarrlr
       61 ddgfrvmphl parlirnaed frtmlsryre eadvnealli gggtskpigd ydntmqlles
      121 glfdrfgfsr lhvaghpegn pdidrdgtsr rvdealqwkq sfsertdadm aivtqfffda
      181 epvtrwvarl qemgiglpih lgiagpaklq tlikfamtcg vgpsvkvlkr ramdlsrlll
      241 pyeptdvlea lsrevasrpd spvekvhffp lggirtcaew agrqqhkga
//
LOCUS       WP_236042796             915 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Marinobacter nauticus].
ACCESSION   WP_236042796
VERSION     WP_236042796.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter nauticus
  ORGANISM  Marinobacter nauticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (residues 1 to 915)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 915)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 915)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 915)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Marinobacter nauticus"
                     /db_xref="taxon:2743"
     Protein         1..915
                     /product="ATP-binding protein"
                     /calculated_mol_wt=101683
     Region          42..254
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Region          279..497
                     /region_name="PBP2_BvgS_HisK_like"
                     /note="The type 2 periplasmic ligand-binding protein
                     domain of the sensor-kinase BvgS and histidine kinase
                     receptors, and related proteins; cd01007"
                     /db_xref="CDD:270228"
     Region          460..806
                     /region_name="BaeS"
                     /note="Signal transduction histidine kinase [Signal
                     transduction mechanisms]; COG0642"
                     /db_xref="CDD:440407"
ORIGIN      
        1 mfclllllfq gavladppqn spapvlgved lrwlaeqdgf nvgvrhtqvp lvfdtgegrm
       61 agiwvdylnr lssklglpie pflmnqmlgt erpepdlilt trlpgapvip gvrhtaplms
      121 ltygvfvnag dpairtlsdl eaakvvivgd dpnqfplldp vesftpvpvs slgeavsrvm
      181 sgeagaflgp vpvvsdyles amingvglav lldrrpvdvv lqvpieqerm frvfdrtvss
      241 lthqehrnir qswlagelpe vetrnvalta gelewlasns eitvglrpdw ppfefeqdgr
      301 ptglvadlls rlekdlgirf qrvmvdsrag aeeklksgel dvlpgmsrtp rteqeflftr
      361 ayvnvpiala irdtgrfigd lrelrdervg vvnrqashdy llinhpnldl ypqqtvedgl
      421 lalsngdldv mvthipavsy tvarlglsnl ritsitpyqy dlrlavspaq pelhrilnka
      481 lgslptsete aiynrwihld ieqeadytvv rriiliaivv vliflywnrk lslevderir
      541 senalrrsed elraakleae rlareaeaas rakseflanm sheirtpmna vigysdllyn
      601 svtdpqqrny lnairagsrs llmlindild lsrieagkmr ldfgpvsvrr llsdvrhifd
      661 lrateqgitl evsvgsgmps ammldetrlr qvlfnlvgna ikftheggvt vravakplge
      721 padadsevcy yrlvvtvadt gigiapdqqe rifeafeqqe gqssrryggt glglaisrkl
      781 vemmggrltv kseanvgstf kvvlprveat veqadddgap eeserllaqt msmhergwlr
      841 eklaedfgne wqevresgdp eqmkdfavri iewgqrhrss svtrygekll adveafnlda
      901 vntaldafpr llgqe
//
LOCUS       WP_236042909             510 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Pseudomonas arcuscaelestis].
ACCESSION   WP_236042909
VERSION     WP_236042909.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas arcuscaelestis
  ORGANISM  Pseudomonas arcuscaelestis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Pseudomonas arcuscaelestis"
                     /db_xref="taxon:2710591"
     Protein         1..510
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=52929
     Region          4..494
                     /region_name="MFS_LfrA"
                     /note="efflux MFS transporter LfrA; NF033896"
                     /db_xref="CDD:411458"
ORIGIN      
        1 mssttgaiqq qprlkrwwgl avlmlpvllv tvdntvlgfa lpkiaealqp tasqqlwmid
       61 ayslvlagll vsmgslgdri ghrkllligs lgfatvsvmt aysasaeqli agragmgifg
      121 amlmpstlal irslfedree rrlavaiwat sltvgsalgp lvggilleff dwgaifllav
      181 pvlipllllg pwllpesead asgpldplsi lqsmvalgal vygikhlasa gldtqalaaf
      241 aigaasgwlf vrrqlrlpvp lmdlalfrnk tfsgsvainl mslaflvgfv ffatqflqiv
      301 ldmsalrasl alvpgqimai vvgmlvvpva qrvsaqvlip allaftgaaf llvaglginl
      361 svlvvafall nigvgaiatv sndiilsaap ptkagaasai setayevgvv lgttvlggvv
      421 tayyrgalql pafltslqer lasetlagah tvaatlgtdq aselmaiagr afeggiglms
      481 wltfvlaala iviarvtlkt pptvaqpels
//
LOCUS       WP_236043040             244 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4113 domain-containing protein [Pseudomonas arcuscaelestis].
ACCESSION   WP_236043040
VERSION     WP_236043040.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas arcuscaelestis
  ORGANISM  Pseudomonas arcuscaelestis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024830.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13438.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Pseudomonas arcuscaelestis"
                     /db_xref="taxon:2710591"
     Protein         1..244
                     /product="DUF4113 domain-containing protein"
                     /calculated_mol_wt=27675
     Region          <1..170
                     /region_name="PolY"
                     /note="Y-family of DNA polymerases; cl28996"
                     /db_xref="CDD:452909"
     Site            order(7..13,42,67..72,99,118..122,124)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176453"
     Region          193..241
                     /region_name="DUF4113"
                     /note="Domain of unknown function (DUF4113); pfam13438"
                     /db_xref="CDD:463876"
ORIGIN      
        1 mpcneiwgvg rrltehlkse gvttawhlas ldpktvrqry gvvlertvre lrgeacielq
       61 eaepdrqaic tsrmfgsrit tkpamqeaia symhratqkl rnqksltsvf rlgirtspfg
      121 deprysnatt vtppyptddv llltglasqa ldniwrdgfr yskaeillmd lrkrgeytad
      181 lftptqstrs delmrtidki ngrfgrnalr sgrmpmaaaw emrrelmsna yttsihqlmr
      241 isas
//
LOCUS       WP_236043086             230 aa            linear   BCT 02-MAR-2025
DEFINITION  S24 family peptidase [Pseudomonas arcuscaelestis].
ACCESSION   WP_236043086
VERSION     WP_236043086.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas arcuscaelestis
  ORGANISM  Pseudomonas arcuscaelestis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 230)
  AUTHORS   Bell,C.E., Frescura,P., Hochschild,A. and Lewis,M.
  TITLE     Crystal structure of the lambda repressor C-terminal domain
            provides a model for cooperative operator binding
  JOURNAL   Cell 101 (7), 801-811 (2000)
   PUBMED   10892750
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012920.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00717.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Pseudomonas arcuscaelestis"
                     /db_xref="taxon:2710591"
     Protein         1..230
                     /product="S24 family peptidase"
                     /calculated_mol_wt=24854
     Region          18..59
                     /region_name="HTH_3"
                     /note="Helix-turn-helix; pfam01381"
                     /db_xref="CDD:460181"
     Region          104..212
                     /region_name="Peptidase_S24"
                     /note="Peptidase S24-like; pfam00717"
                     /db_xref="CDD:425835"
     Site            order(144,181)
                     /site_type="active"
                     /note="Catalytic site [active]"
                     /db_xref="CDD:119397"
ORIGIN      
        1 maeclalkaa vdsfnegksr rdsltqgkia ealginqgsv saylngynal nvkvasviag
       61 lisqpvetfs prlaeeiaql arssfetnve qgppiisptr rieivgtaql gndgywvgld
      121 iaegwvetws rdedayalrl kgdsmapair sgwiavcepn hrlvpgeyvm vtttdgqsmv
      181 kellfeneeg vnlasvnsay gerrviawad iekihyvgni lapskvlgrf
//
LOCUS       WP_236043090             122 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: head completion/stabilization protein [Pseudomonas].
ACCESSION   WP_236043090
VERSION     WP_236043090.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
REFERENCE   1  (residues 1 to 122)
  AUTHORS   Linderoth,N.A., Ziermann,R., Haggard-Ljungquist,E., Christie,G.E.
            and Calendar,R.
  TITLE     Nucleotide sequence of the DNA packaging and capsid synthesis genes
            of bacteriophage P2
  JOURNAL   Nucleic Acids Res 19 (25), 7207-7214 (1991)
   PUBMED   1837355
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017713.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05926.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..122
                     /product="head completion/stabilization protein"
                     /GO_process="GO:0019069 - viral capsid assembly [Evidence
                     IEA]"
                     /calculated_mol_wt=13669
     Region          21..>99
                     /region_name="Phage_GPL"
                     /note="Phage head completion protein (GPL); pfam05926"
                     /db_xref="CDD:428676"
ORIGIN      
        1 mqsdnyavnh adrcymltcd dpfwpsinlr elrqhlalcg aisdtrleva araaahkagr
       61 efaqwrrvlr drgykrledm ashqllsgcy rraveanthl alekdvllva cqpgpngvpa
      121 he
//
LOCUS       WP_236043011             125 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6283 family protein [Pseudomonas arcuscaelestis].
ACCESSION   WP_236043011
VERSION     WP_236043011.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas arcuscaelestis
  ORGANISM  Pseudomonas arcuscaelestis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 125)
  AUTHORS   Wu,P., Wan,D., Xu,G., Wang,G., Ma,H., Wang,T., Gao,Y., Qi,J.,
            Chen,X., Zhu,J., Li,Y.Q., Deng,Z. and Chen,W.
  TITLE     An Unusual Protector-Protege Strategy for the Biosynthesis of
            Purine Nucleoside Antibiotics
  JOURNAL   Cell Chem Biol 24 (2), 171-181 (2017)
   PUBMED   28111097
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040044.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19800.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Pseudomonas arcuscaelestis"
                     /db_xref="taxon:2710591"
     Protein         1..125
                     /product="DUF6283 family protein"
                     /calculated_mol_wt=14009
     Region          9..114
                     /region_name="DUF6283"
                     /note="Family of unknown function (DUF6283); pfam19800"
                     /db_xref="CDD:437632"
ORIGIN      
        1 mssacelnpl nkpcrscpwr vdqdardipn feleraerli hccpdkagmg psyldpmfac
       61 hqsregeefa cagwlatvgh ahprirhlvs kgqipehalk pgvdwpelhs ayhevldklr
      121 etsie
//
LOCUS       WP_236043288             452 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase family 18 protein, partial [Klebsiella
            michiganensis].
ACCESSION   WP_236043288
VERSION     WP_236043288.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (residues 1 to 452)
  AUTHORS   Perrakis,A., Tews,I., Dauter,Z., Oppenheim,A.B., Chet,I.,
            Wilson,K.S. and Vorgias,C.E.
  TITLE     Crystal structure of a bacterial chitinase at 2.3 A resolution
  JOURNAL   Structure 2 (12), 1169-1180 (1994)
   PUBMED   7704527
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00704.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Klebsiella michiganensis"
                     /db_xref="taxon:1134687"
     Protein         <1..452
                     /product="glycosyl hydrolase family 18 protein"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <1..232
                     /region_name="ChiA"
                     /note="Chitinase, GH18 family [Carbohydrate transport and
                     metabolism]; COG3325"
                     /db_xref="CDD:442554"
     Region          <248..407
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
     Region          400..448
                     /region_name="ChiC_BD"
                     /note="Chitin-binding domain of chitinase C; cd12215"
                     /db_xref="CDD:213178"
ORIGIN      
        1 pedgenyall igelrkqlda aglsnvkisi assavvktlg ysnvnallea glyginvmty
       61 dffgtpwaes vthhtnlkal eeggwgvdtv vghllsegfp aerinigyaa ytrngrnael
      121 eslsplkgty spgtgttvgs fesgttewyd iiynyldlen qkgrngfnvy tdkvadadyl
      181 ynpdsklfms ldtprtvkak geyaaslglg alftwtidqd ngvlvnaare glgyemasev
      241 idmepfyfeg invdpadepd eedattdvnh apkaavelrv vggstvqlsg egssdedkdd
      301 itfswgvpse itvadktvpv iefvvpdvsv ktnfqftlfv rdvwgepstq qrfvlvavpa
      361 asqiqpepee edsvvpvepe edttpaedet sgddattpyp lwdaatvygg nwgsfetvsw
      421 kghnyqvkww sqgdqpdlnc aagqawtdlg ay
//
LOCUS       WP_236043374             960 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Marinobacter nauticus].
ACCESSION   WP_236043374
VERSION     WP_236043374.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter nauticus
  ORGANISM  Marinobacter nauticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024572.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13174.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Marinobacter nauticus"
                     /db_xref="taxon:2743"
     Protein         1..960
                     /product="tetratricopeptide repeat protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=108566
     Region          119..>293
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          121..204
                     /region_name="CpoB"
                     /note="Cell division protein CpoB, coordinates
                     peptidoglycan biosynthesis and outer membrane constriction
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG1729"
                     /db_xref="CDD:441335"
     Region          280..480
                     /region_name="BamD"
                     /note="Outer membrane protein assembly factor BamD,
                     BamD/ComL family [Cell wall/membrane/envelope biogenesis];
                     COG4105"
                     /db_xref="CDD:443281"
     Region          <396..481
                     /region_name="CpoB"
                     /note="Cell division protein CpoB, coordinates
                     peptidoglycan biosynthesis and outer membrane constriction
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG1729"
                     /db_xref="CDD:441335"
     Region          418..592
                     /region_name="BamD"
                     /note="Outer membrane protein assembly factor BamD,
                     BamD/ComL family [Cell wall/membrane/envelope biogenesis];
                     COG4105"
                     /db_xref="CDD:443281"
     Region          612..852
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
ORIGIN      
        1 msngtpgkmv kglvvagall masgcqmlqs mmpagdeemp rvregtlaal patetrqvqg
       61 ieagsgpadd vsietvmesy kallplvddp rkqvtirhrl adlefqraer kmadtavdel
      121 agaieayqrl lseyperegn dkiyyqlara welrgatpqq ldtldtlvrr ypdsdywiea
      181 qfrrgdllfi dgryreaeqa fgevtlasqe rmadasflvn ahymkgwslf kqaqyqealf
      241 syvevldlvm pegqpvedvd qrsqtliedl frvvglslsy ldgaetlqal frqtggrpye
      301 ilvydrysel llereqygda idvfeayied hpaspwapry hiriidtlel agftrtvper
      361 kadfvslygi ysdywqaagp damgfieqql eqllpeladr qyllageasd qqqaddhyrk
      421 aasyyaefaa tfpdhprtpe rlfllgetyl eledwpaaia afervaydyp edtvaeraae
      481 agyasvlafr eysitwnsls vseqaayqel qqlnrlrfan afpedtrapa vyyialqref
      541 drknweetvn maarlvtwqp tpsaelttea llfsghslse laryaeaeqa yrdalatmae
      601 dderrsgvre nlaaavyrqa eqladagnve aavseflrvg avvpesalra naeydaasll
      661 itaklwepai gvltgfrraf pdhelidtvp aklalayret aqweraadel qqmvalattp
      721 eerrenllia aelydqagnr dkaidtwrny anshpepadv ymeaanrlae lyqqaddtvk
      781 rnywlrkqme tvdrnpdaad drmrylaasa sailareala rydnirltlp lnesmaaktd
      841 aleravnayk ktasyglstf ateagyqiah iygrlgadlm dserptglse lelaqyelll
      901 eeqaypfedn aidiheqnir raregifdew vkrsyealkv llpgryrkee vtsgvvyeld
//
LOCUS       WP_236043539             180 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: histidine phosphatase family protein [Marinobacter].
ACCESSION   WP_236043539
VERSION     WP_236043539.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter
  ORGANISM  Marinobacter
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae.
REFERENCE   1  (residues 1 to 180)
  AUTHORS   Rigden,D.J.
  TITLE     The histidine phosphatase superfamily: structure and function
  JOURNAL   Biochem J 409 (2), 333-348 (2008)
   PUBMED   18092946
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012521.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00300.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Marinobacter"
                     /db_xref="taxon:2742"
     Protein         1..180
                     /product="histidine phosphatase family protein"
                     /calculated_mol_wt=19280
     Region          20..179
                     /region_name="HP"
                     /note="Histidine phosphatase domain found in a
                     functionally diverse set of proteins, mostly phosphatases;
                     contains a His residue which is phosphorylated during the
                     reaction; cl11399"
                     /db_xref="CDD:472174"
ORIGIN      
        1 maigafgfsq thasekdawa alregravlm lrhalapgtg dpvgfvlgdc stqrnlndtg
       61 reqarawkaf laehgidear vfssqwcrcl etaqemnmgp vtewpalnsf frnrgdgpqq
      121 tretinlvna lgpgmpvvmv shqvnvtalt gifpasnegv ilalplsenp dilarvapgq
//
LOCUS       WP_236043566             356 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Marinobacter nauticus].
ACCESSION   WP_236043566
VERSION     WP_236043566.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter nauticus
  ORGANISM  Marinobacter nauticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (residues 1 to 356)
  AUTHORS   Aarts,M.G., Hodge,R., Kalantidis,K., Florack,D., Wilson,Z.A.,
            Mulligan,B.J., Stiekema,W.J., Scott,R. and Pereira,A.
  TITLE     The Arabidopsis MALE STERILITY 2 protein shares similarity with
            reductases in elongation/condensation complexes
  JOURNAL   Plant J 12 (3), 615-623 (1997)
   PUBMED   9351246
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019605.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07993.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Marinobacter nauticus"
                     /db_xref="taxon:2743"
     Protein         1..356
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=38533
     Region          1..243
                     /region_name="Lys2b"
                     /note="Thioester reductase domain of alpha aminoadipate
                     reductase Lys2 and NRPSs [Secondary metabolites
                     biosynthesis, transport and catabolism]; COG3320"
                     /db_xref="CDD:442549"
ORIGIN      
        1 mtilitgatg figkylcltl lqqghdvkal trskssltql tdfleqqgva merfsalegd
       61 lekpglglvt lpngiecivh laarfawnlp ehearhtnvt gslrvaelar hlncrlvfit
      121 gfmlaneahl srqgiqlshp eqtdwsqvyr raggyeaskl esafrlrefv arhglnavev
      181 qpatvaghrs tgdldpaqpl yslldnlyhg rlamipgspe hwlplipvds laqliaaact
      241 athvpdtlla ldqntpnlag llqaaaqllg kpgprrhlpi gvmkallaip glpgllkvap
      301 eslaffqtcr fdtsrteqfl aqqnvqlppf aeyleascrh ycqrlgvggg avtiga
//
LOCUS       WP_417281885             288 aa            linear   BCT 02-MAR-2025
DEFINITION  Rpn family recombination-promoting nuclease/putative transposase
            [Alicyclobacillus fodiniaquatilis].
ACCESSION   WP_417281885
VERSION     WP_417281885.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus fodiniaquatilis
  ORGANISM  Alicyclobacillus fodiniaquatilis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 288)
  AUTHORS   Kingston,A.W., Ponkratz,C. and Raleigh,E.A.
  TITLE     Rpn (YhgA-Like) Proteins of Escherichia coli K-12 and Their
            Contribution to RecA-Independent Horizontal Transfer
  JOURNAL   J Bacteriol 199 (7), e00787-16 (2017)
   PUBMED   28096446
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 288)
  AUTHORS   Aziz,R.K., Breitbart,M. and Edwards,R.A.
  TITLE     Transposases are the most abundant, most ubiquitous genes in nature
  JOURNAL   Nucleic Acids Res 38 (13), 4207-4217 (2010)
   PUBMED   20215432
REFERENCE   3  (residues 1 to 288)
  AUTHORS   Kinch,L.N., Ginalski,K., Rychlewski,L. and Grishin,N.V.
  TITLE     Identification of novel restriction endonuclease-like fold families
            among hypothetical proteins
  JOURNAL   Nucleic Acids Res 33 (11), 3598-3605 (2005)
   PUBMED   15972856
  REMARK    Publication Status: Online-Only
REFERENCE   4  (residues 1 to 288)
  AUTHORS   Rice,P.A. and Baker,T.A.
  TITLE     Comparative architecture of transposase and integrase complexes
  JOURNAL   Nat Struct Biol 8 (5), 302-307 (2001)
   PUBMED   11774877
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10579777
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Alicyclobacillus fodiniaquatilis"
                     /db_xref="taxon:1661150"
     Protein         1..288
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004536 - DNA nuclease activity [Evidence
                     IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /GO_process="GO:0032196 - transposition [Evidence IEA]"
                     /calculated_mol_wt=33393
     Region          10..234
                     /region_name="PDDEXK_2"
                     /note="PD-(D/E)XK nuclease family transposase; pfam12784"
                     /db_xref="CDD:432783"
ORIGIN      
        1 mmdllkpsld fvfkrifgve enrdilidfl naifesanep gvteieilnp fldktavydk
       61 qsvldikart adhtiiniei qlrdqkdmek rtlyywskly gsqlvqgeiy rslcrtvtin
      121 ilgfnyidne ryhntfhlre dntgliltdd ieihmielek lrdiaegqqr klvrwmlfll
      181 gpakekmeei amkepaiqka lttleflsqd keirelyear qkalhdwnss ihgaredgie
      241 egkaigkqeg kievamhmls kgmsrqdvat ftglsvteie qlqrrqtq
//
LOCUS       WP_236043628             157 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_236043628
VERSION     WP_236043628.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..157
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
     Region          97..150
                     /region_name="HTH_ARSR"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; cl46857"
                     /db_xref="CDD:481197"
     Site            order(98..100,113..115,123..124,126..127,129..133,144)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:99777"
     Site            order(109,111,113,144..146,149,152..153)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:99777"
ORIGIN      
        1 artiivdysh pdiqqlaall yrkkkiihgd ivfvvkseil adpveniiin sistivldyi
       61 dvtqrlqkyl qnasdhrcik vfrksissld scvnikltkq edsllpyiis glnnkkiaqa
      121 tdlsnmmish yrrniyqkln vrniaglyhf lhslegg
//
LOCUS       WP_236043653            1090 aa            linear   BCT 02-MAR-2025
DEFINITION  BTAD domain-containing putative transcriptional regulator
            [Streptomyces pilosus].
ACCESSION   WP_236043653
VERSION     WP_236043653.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces pilosus
  ORGANISM  Streptomyces pilosus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 1090)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015649.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03704.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Streptomyces pilosus"
                     /db_xref="taxon:28893"
     Protein         1..1090
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /calculated_mol_wt=117649
     Region          1..96
                     /region_name="CadC1"
                     /note="DNA-binding winged helix-turn-helix (wHTH) domain
                     [Transcription]; COG3710"
                     /db_xref="CDD:442924"
     Region          108..1035
                     /region_name="COG3903"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443109"
     Region          804..830
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(805..806,809..810,812,843,846..847,850..851,
                     853..854,878,886..887,890..891,894)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          835..871
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          877..910
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mryrilgttq alrpdgtvvp vggarlrall tvlalrpgrt vpvgllvdev wdgappadat
       61 galqalvgrl rralgadait sadggyrlta tpddidlhrf erlageglra ladgdpakaa
      121 avlddalalw rggaalaglp drtaeaarve trhldvlrar htaalalgga eqslpeltal
      181 cdrhpldepl qtlrlralrd tgrsaealaa yecvrrllad rlgsdpgpel rslhaqllgp
      241 gpepaaarap rdvppgnlra rltsfvgres dietiradla aarlvtllgp ggagktrlsq
      301 eaaetvrqat pdgvwlaela pvddpgavpe avltavgare tvlygagaes mravtdrhad
      361 pverlaehcg rrrmllildn cehvvdaaah lvetllercp gltvlatsre plgvrgellr
      421 pveplpepva lrlladrgaa arpgfstedd peacaeicrr ldglplaiel aaarlrmlsp
      481 rriadrlddr frlltsgsrt alprqqtlra vvdwswdlld ederdvlcrl svfaggcdlv
      541 aaeavcgpaa ldalgslvdk slvvaalsgd gemryrllet vaeyagerld esgrrpeaer
      601 ahltyyrela rttepmlrgp rqpaaialle reyenvrtal rhavalrdeq ealcitlslt
      661 wywqmrdlri earnwcsevm alapdpftep vrpaaplwqr ctdapppmtg evlaearrgv
      721 hlahlahmdt elddwqtpqa qhklrlvgat yapgmpqvcr ppgllwvfav mltgdmerlr
      781 lvvdaairtc renpgfewel acnlqlranf lanrsdwagd arrdadeale ihrglgdtwg
      841 iaealsarge areragayve aaadfeaaie cadrlgarah ravltarlgs alleagdher
      901 gerllrgvie dsrgrhteal paarlfltgw lcstgrtaea rehlralree fviahyvvfd
      961 afilgaegwl eiaegdderg lavvreavrq agdplaaama phmraayltl gavalaglda
     1021 grhardaarc vgaadswlpp ghhaglverq vreraeartr avlgdaayea ayaegaglse
     1081 eeaaallepa
//
LOCUS       WP_236043800             433 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: restriction endonuclease [Streptomyces].
ACCESSION   WP_236043800
VERSION     WP_236043800.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
REFERENCE   1  (residues 1 to 433)
  AUTHORS   Bujnicki,J.M. and Rychlewski,L.
  TITLE     Identification of a PD-(D/E)XK-like domain with a novel
            configuration of the endonuclease active site in the
            methyl-directed restriction enzyme Mrr and its homologs
  JOURNAL   Gene 267 (2), 183-191 (2001)
   PUBMED   11313145
REFERENCE   2  (residues 1 to 433)
  AUTHORS   Waite-Rees,P.A., Keating,C.J., Moran,L.S., Slatko,B.E.,
            Hornstra,L.J. and Benner,J.S.
  TITLE     Characterization and expression of the Escherichia coli Mrr
            restriction system
  JOURNAL   J Bacteriol 173 (16), 5207-5219 (1991)
   PUBMED   1650347
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016362.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04471.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..433
                     /product="restriction endonuclease"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_process="GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /calculated_mol_wt=47882
     Region          47..230
                     /region_name="RE_AspBHI_N"
                     /note="Restriction endonuclease AspBHI N-terminal;
                     pfam18062"
                     /db_xref="CDD:407899"
     Region          245..429
                     /region_name="PDDEXK_nuclease-like"
                     /note="PDDEXK family nucleases; cl40440"
                     /db_xref="CDD:477358"
ORIGIN      
        1 mggqlragqv yryatgkdpr paelegypnf hhvthspnlp ralleaging mrkvpapsge
       61 rrpvilvrss pwkagteqtp whdvfdmdng hvryfgdhka tttvepgkti gnaalleafa
      121 rhqghtpeer agavplllfr avsrsgkvkg hvefcglgii eraerlvqwg gsdhttftny
      181 vydialldlt deddtvswew ihsrrntdls daetlalapr awrewvkngs selprlrrrv
      241 arakvtkvpe qrpkpgtsea kdleliykyf dgrkhdfeav asavaarvlr gagnsylegw
      301 ltqrsgdgga dfvgrldigs glagtslvvl gqakcvrldh vvsadqiarv varlrrgwig
      361 vyvttgaysv paqtemvedq ypivlvngle larelrsmar ddhggdleac iehilrvret
      421 avtnrrpeei lle
//
LOCUS       WP_236043801             459 aa            linear   BCT 02-MAR-2025
DEFINITION  replication initiator [Streptomyces pilosus].
ACCESSION   WP_236043801
VERSION     WP_236043801.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces pilosus
  ORGANISM  Streptomyces pilosus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 459)
  AUTHORS   Ghinet,M.G., Bordeleau,E., Beaudin,J., Brzezinski,R., Roy,S. and
            Burrus,V.
  TITLE     Uncovering the prevalence and diversity of integrating conjugative
            elements in actinobacteria
  JOURNAL   PLoS One 6 (11), e27846 (2011)
   PUBMED   22114709
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042633.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20199.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Streptomyces pilosus"
                     /db_xref="taxon:28893"
     Protein         1..459
                     /product="replication initiator"
                     /calculated_mol_wt=49981
     Region          27..435
                     /region_name="RepSA"
                     /note="Replication initiator protein, pSAM2; cl46052"
                     /db_xref="CDD:480392"
ORIGIN      
        1 mtpaaptaai rqltalarhg dlstyahqiq rlggcerpir meghrldvha ttgeivreit
       61 drdlpagqll ircnnrratr cascaevyrk dtfhlvtagl sggkgigpav aqhprvfatf
      121 tapsfgpvhn rpgggrcrcg rlhpdddpal gtpldpdryd yraavlwnah agklwgrftt
      181 ylrqhlasra glsrsalrhc lkvsyakvae yqrrgavhfh avirldgpag aedsppawat
      241 telltdairw aareaeapgp vldsraytfh fgdqldirpi rsadfagtse lssravaayi
      301 akyatkgaet agtldrpirn pitdligsgv tdharrmilt cwhlgalpel edlrlrkwah
      361 mlgfrghfst ksraysvtlg alrqeradhn ealareraae aghplpdpdt vlvlshwrfa
      421 gtgltaaerl ithgipspan stdddmegap twtadamns
//
LOCUS       WP_236043865             108 aa            linear   BCT 02-MAR-2025
DEFINITION  Arc family DNA-binding protein [Streptomyces pilosus].
ACCESSION   WP_236043865
VERSION     WP_236043865.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces pilosus
  ORGANISM  Streptomyces pilosus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 108)
  AUTHORS   Raumann,B.E., Rould,M.A., Pabo,C.O. and Sauer,R.T.
  TITLE     DNA recognition by beta-sheets in the Arc repressor-operator
            crystal structure
  JOURNAL   Nature 367 (6465), 754-757 (1994)
   PUBMED   8107872
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015807.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03869.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Streptomyces pilosus"
                     /db_xref="taxon:28893"
     Protein         1..108
                     /product="Arc family DNA-binding protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=11619
ORIGIN      
        1 mtlhlprehr drlrahaqrd rrslnsellh mpevaraaag ekraialtai alslpryags
       61 rippalkdga ssghpvksgr vraewagrps pegtasmsrs lslrssra
//
LOCUS       WP_236043898             258 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Streptomyces pilosus].
ACCESSION   WP_236043898
VERSION     WP_236043898.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces pilosus
  ORGANISM  Streptomyces pilosus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017416.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05598.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Streptomyces pilosus"
                     /db_xref="taxon:28893"
     Protein         1..258
                     /product="transposase"
                     /calculated_mol_wt=28375
     Region          <2..100
                     /region_name="COG3666"
                     /note="Transposase, IS1182 family [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:442883"
ORIGIN      
        1 mlqfaenltd raaahrvryg mdlkyalgle lddpgfdasv lsefrtrlve hgmeeevldl
       61 lltalkdrgl vkaggrqrtd strvlaavrd lnrlelaget lraalealac gapdwlagav
      121 svrewtdryg prthswhppa stskreetal vygrdgfall eavqapdapa wlrelpavqv
      181 lrtmwvqnyh rtvteagtev krreskdlpp grlrlasrtt ptratasnra pggpatrsts
      241 vspammptcr trlpaarr
//
LOCUS       WP_236044044             369 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Vibrio paracholerae].
ACCESSION   WP_236044044
VERSION     WP_236044044.1
KEYWORDS    RefSeq.
SOURCE      Vibrio paracholerae
  ORGANISM  Vibrio paracholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Vibrio paracholerae"
                     /db_xref="taxon:650003"
     Protein         1..369
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=41749
     Region          6..336
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mfksnkitll isslagggae gvcvnvangl adhgwqvnll vlhtnnaayl erispkvnlv
       61 vlgvnharha plpllryirq hkpkkmlvfn yelavltvml rslfrfktki iarnintfsk
      121 nttqsqgiwr ryivtplinh fygkcdhiin qcqamrddli svfphladkt sviynpvakh
      181 vedyakahdl tqvekqdyll cvgrlekqka fhyaiegfag iasefpnlrl kivgqgsleq
      241 slkqcaqdfg vadrvdfegf qadmipyyly akatlltsly egfpnvlies itlgtpvvaf
      301 dcpsgpreii qegvngylve ylsvidikdk lmilmhrnin lirvyntssf ffneyvvsny
      361 iyrlndhnt
//
LOCUS       WP_236044058             111 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3709 domain-containing protein, partial [Vibrio paracholerae].
ACCESSION   WP_236044058
VERSION     WP_236044058.1
KEYWORDS    RefSeq.
SOURCE      Vibrio paracholerae
  ORGANISM  Vibrio paracholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023908.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12493.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Vibrio paracholerae"
                     /db_xref="taxon:650003"
     Protein         1..>111
                     /product="DUF3709 domain-containing protein"
     Region          64..93
                     /region_name="DUF3709"
                     /note="Protein of unknown function (DUF3709); pfam12493"
                     /db_xref="CDD:289275"
ORIGIN      
        1 msaiqycfsl pneaamclvl kiqcycliem lslrgvnvag ssrfeqfgaf tyrlkvsrql
       61 sivlrclmkr qcvcrckfqs dclieflrpr evsfslssrf eqfgaftygl k
//
LOCUS       WP_236044062             248 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase domain-containing protein [Pseudomonas
            arcuscaelestis].
ACCESSION   WP_236044062
VERSION     WP_236044062.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas arcuscaelestis
  ORGANISM  Pseudomonas arcuscaelestis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019846.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08241.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Pseudomonas arcuscaelestis"
                     /db_xref="taxon:2710591"
     Protein         1..248
                     /product="methyltransferase domain-containing protein"
                     /GO_function="GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /calculated_mol_wt=27634
     Region          27..>155
                     /region_name="COG4627"
                     /note="Predicted SAM-depedendent methyltransferase
                     [General function prediction only]"
                     /db_xref="CDD:443666"
ORIGIN      
        1 mhptamqngk lffdtyldka sassatvvve igaqdvngsl revsppgvqy igvdfvvgkg
       61 vdvvltdpyr lpfesesldv vvtssclehs emfwlsfnec lrvlkpdgll fmnvpsngaf
      121 hrypvdcwrf ypdagsalvt wakhqgmnpa llesfvtpqh adiwndflav fvkdetyvgr
      181 ypnrminave afengkvngs dqlfnftqlp edlrrlneav qrlskmegre svvndvlekl
      241 laftqgqs
//
LOCUS       WP_236043799              95 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6083 domain-containing protein [Streptomyces pilosus].
ACCESSION   WP_236043799
VERSION     WP_236043799.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces pilosus
  ORGANISM  Streptomyces pilosus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 95)
  AUTHORS   Wu,P., Wan,D., Xu,G., Wang,G., Ma,H., Wang,T., Gao,Y., Qi,J.,
            Chen,X., Zhu,J., Li,Y.Q., Deng,Z. and Chen,W.
  TITLE     An Unusual Protector-Protege Strategy for the Biosynthesis of
            Purine Nucleoside Antibiotics
  JOURNAL   Cell Chem Biol 24 (2), 171-181 (2017)
   PUBMED   28111097
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039647.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19561.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Streptomyces pilosus"
                     /db_xref="taxon:28893"
     Protein         1..95
                     /product="DUF6083 domain-containing protein"
                     /calculated_mol_wt=10686
     Region          1..95
                     /region_name="DUF6083"
                     /note="Family of unknown function (DUF6083); pfam19561"
                     /db_xref="CDD:466119"
ORIGIN      
        1 mgtseeeprr lgggrsrclf cgllqnrvat ldqdwvllep tmhppahtvp aehrwielsd
       61 grvtvhgvcp pdqfqrcrie hrlacpaqql pdlwp
//
LOCUS       WP_236044085             388 aa            linear   BCT 02-MAR-2025
DEFINITION  thiolase C-terminal domain-containing protein [Pseudomonas
            arcuscaelestis].
ACCESSION   WP_236044085
VERSION     WP_236044085.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas arcuscaelestis
  ORGANISM  Pseudomonas arcuscaelestis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 388)
  AUTHORS   Brown,A.K., Sridharan,S., Kremer,L., Lindenberg,S., Dover,L.G.,
            Sacchettini,J.C. and Besra,G.S.
  TITLE     Probing the mechanism of the Mycobacterium tuberculosis
            beta-ketoacyl-acyl carrier protein synthase III mtFabH: factors
            influencing catalysis and substrate specificity
  JOURNAL   J Biol Chem 280 (37), 32539-32547 (2005)
   PUBMED   16040614
REFERENCE   2  (residues 1 to 388)
  AUTHORS   Kursula,P., Ojala,J., Lambeir,A.M. and Wierenga,R.K.
  TITLE     The catalytic cycle of biosynthetic thiolase: a conformational
            journey of an acetyl group through four binding modes and two
            oxyanion holes
  JOURNAL   Biochemistry 41 (52), 15543-15556 (2002)
   PUBMED   12501183
REFERENCE   3  (residues 1 to 388)
  AUTHORS   Scarsdale,J.N., Kazanina,G., He,X., Reynolds,K.A. and Wright,H.T.
  TITLE     Crystal structure of the Mycobacterium tuberculosis
            beta-ketoacyl-acyl carrier protein synthase III
  JOURNAL   J Biol Chem 276 (23), 20516-20522 (2001)
   PUBMED   11278743
REFERENCE   4  (residues 1 to 388)
  AUTHORS   Modis,Y. and Wierenga,R.K.
  TITLE     Crystallographic analysis of the reaction pathway of Zoogloea
            ramigera biosynthetic thiolase
  JOURNAL   J Mol Biol 297 (5), 1171-1182 (2000)
   PUBMED   10764581
REFERENCE   5  (residues 1 to 388)
  AUTHORS   Mathieu,M., Modis,Y., Zeelen,J.P., Engel,C.K., Abagyan,R.A.,
            Ahlberg,A., Rasmussen,B., Lamzin,V.S., Kunau,W.H. and Wierenga,R.K.
  TITLE     The 1.8 A crystal structure of the dimeric peroxisomal
            3-ketoacyl-CoA thiolase of Saccharomyces cerevisiae: implications
            for substrate binding and reaction mechanism
  JOURNAL   J Mol Biol 273 (3), 714-728 (1997)
   PUBMED   9402066
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047238.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22691.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Pseudomonas arcuscaelestis"
                     /db_xref="taxon:2710591"
     Protein         1..388
                     /product="thiolase C-terminal domain-containing protein"
                     /calculated_mol_wt=40262
     Region          3..386
                     /region_name="PRK08256"
                     /note="lipid-transfer protein; Provisional"
                     /db_xref="CDD:181327"
ORIGIN      
        1 mirkvlvtgv ammpftpigs retpaalaag avqlcladac idfelidqif aanahsgtav
       61 gehamrsfgl tgtplvsigd gemsgyaafh larqcvlsge aecvlavgce alpsgsagrt
      121 raaldavset dgenllisqd lrdllvlref peklyaaqms alqallegsa avservlaqa
      181 hrqarlnpha llhggqdypg egtpylcppa ngaaavllcs pefarryglr tdvaslasvr
      241 gsnsesdlqs lsvldvlgra atrrvacqay eqagvgpeei dvvelhdhsl adfligsaal
      301 gfcseaqlds fsrgrhaged grvaicssgg llgrghapga sglaqlaelv wqlrgdagar
      361 qvkgarialq hssargravs vgilqrmf
//
LOCUS       WP_236044135             510 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Pseudomonas arcuscaelestis].
ACCESSION   WP_236044135
VERSION     WP_236044135.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas arcuscaelestis
  ORGANISM  Pseudomonas arcuscaelestis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Pseudomonas arcuscaelestis"
                     /db_xref="taxon:2710591"
     Protein         1..510
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=52963
     Region          4..494
                     /region_name="MFS_LfrA"
                     /note="efflux MFS transporter LfrA; NF033896"
                     /db_xref="CDD:411458"
ORIGIN      
        1 mssttgaiqq qprlkrwwgl avlmlpvllv tvdntvlgfa lpkiaealqp tasqqlwmid
       61 ayslvlagll vsmgslgdri ghrkllligs lgfatvsvmt aysasaeqli agragmgifg
      121 amlmpstlal irslfedree rrlavaiwat sltvgsalgp lvggilleff dwgaifllav
      181 pvlipllllg pwllpesead asgpldplsi lqsmvalgal vygikhlasa gldtqalaaf
      241 aigaasgwlf vrrqlrlpvp lmdlalfrnk tfsgsvainl mslaflvgfv ffatqflqiv
      301 ldmsalrasl alvpgqimai vvgmlvvpva qrvsaqvlip aflaftgaaf llvaglginl
      361 svlvvafall nigvgaiatv sndiilsaap ptkagaasai setayevgvv lgttvlggvv
      421 tayyrgalql pafltslqer lasetlagah tvaatlgtdq aselmaiagr afeggiglms
      481 wltfvlaala iviarvtlkt pptvaqpels
//
LOCUS       WP_236044164             858 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Pseudomonas arcuscaelestis].
ACCESSION   WP_236044164
VERSION     WP_236044164.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas arcuscaelestis
  ORGANISM  Pseudomonas arcuscaelestis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 858)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 858)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019348.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07728.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..858
                     /organism="Pseudomonas arcuscaelestis"
                     /db_xref="taxon:2710591"
     Protein         1..858
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=97035
     Region          <309..788
                     /region_name="McrB"
                     /note="5-methylcytosine-specific restriction endonuclease
                     McrBC, GTP-binding regulatory subunit McrB [Defense
                     mechanisms]; COG1401"
                     /db_xref="CDD:441011"
     Region          453..>590
                     /region_name="COG4127"
                     /note="Predicted restriction endonuclease, Mrr-cat
                     superfamily [General function prediction only]"
                     /db_xref="CDD:443303"
ORIGIN      
        1 mhepiaerea iwteflerwp leslptmtlk qysqagtddy fcrwlekhte slgsiwggss
       61 fkfgvfsrld kedkhsphhs fspdyawlnk ygdsaqeafa hvrglivava naarkgdldv
      121 ienadlgpvf kwkiaflyqd rkcpqilgif aardlraalg erasykenla glhrqmianr
      181 sdenlfaysd rcwdeaqrwl heqslpeqal gffnsqpdrf eaikttqkma gfivgngrql
      241 alvrekkels afvspgpwqq listsstehy psertrhsgl gtcaplltqg aeallvtfkt
      301 lrdldafcea yelddaaaep rlpsieepni tmsvplnqil fgppgtgkth atidaaleil
      361 dpdflrgavg ertllkarfd elihedrvrf vtfhqsfsye dfvegiralp segddqtggv
      421 irydvepgif rklcedavrd kayehkvgvr eharvwkisi ddagpsetrn ycfehgeari
      481 gwqyvgdirn anladpalkl gtneqsslnm fgneilpgdi llclrsktsi cgvgvvtgey
      541 rfdehqepll redfvhvlpv rwlakhinfd iltlngdtsl tqktvyplsr ikwpalqqal
      601 qdadialeaa hstakaatah qphvliidei nrgnisrifg elitllepsk ragaeealhv
      661 qlpyskaqfn vpsnvyligt mntadrslag ldialrrrfs fkemppqpel lreitvnein
      721 iadllstmne rievlldrdh clghayfmpl kkertmerla mifrnqvlpl lqeyffedwq
      781 riqwvlndhr kpdpadrfvf qtkadlgvlf gdhvpvpshn mpwrinqhaf trasayrgli
      841 aamqptavpa seletvtp
//
LOCUS       WP_236043853             375 aa            linear   BCT 02-MAR-2025
DEFINITION  endonuclease NucS domain-containing protein [Streptomyces pilosus].
ACCESSION   WP_236043853
VERSION     WP_236043853.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces pilosus
  ORGANISM  Streptomyces pilosus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 375)
  AUTHORS   Creze,C., Ligabue,A., Laurent,S., Lestini,R., Laptenok,S.P.,
            Khun,J., Vos,M.H., Czjzek,M., Myllykallio,H. and Flament,D.
  TITLE     Modulation of the Pyrococcus abyssi NucS endonuclease activity by
            replication clamp at functional and structural levels
  JOURNAL   J Biol Chem 287 (19), 15648-15660 (2012)
   PUBMED   22431731
REFERENCE   2  (residues 1 to 375)
  AUTHORS   Ren,B., Kuhn,J., Meslet-Cladiere,L., Briffotaux,J., Norais,C.,
            Lavigne,R., Flament,D., Ladenstein,R. and Myllykallio,H.
  TITLE     Structure and function of a novel endonuclease acting on branched
            DNA substrates
  JOURNAL   EMBO J 28 (16), 2479-2489 (2009)
   PUBMED   19609302
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014048.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01939.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Streptomyces pilosus"
                     /db_xref="taxon:28893"
     Protein         1..375
                     /product="endonuclease NucS domain-containing protein"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /calculated_mol_wt=41690
     Region          <27..125
                     /region_name="NucS"
                     /note="Endonuclease NucS, RecB family [Replication,
                     recombination and repair]; COG1637"
                     /db_xref="CDD:441244"
ORIGIN      
        1 mamplefglw rvddkpvrva trpmpaesrl eelieadpgi lghpllligr qvltqygkvv
       61 dllgmdaegg lhvlelkrdr tprevvaqvl dygswvqelt neqirdiyta yargrglaee
      121 ldeafavrfg gtppealnst haltivasei daaterivty lasgfqvpvn vlffryfede
      181 grsylartwl mdeaeavvps sgargrgkqe pwngadwyvs fgdeaggrnw ddalrygfvs
      241 agggewfsrt lrslplgarv fthipkvgyv gvgtvsgepq pfedavlsne genqrmsdls
      301 lagtyrrvgd raesdaddrr ewivpvtwer avpreealwr tgffanqnsa cklrarftie
      361 evtrhfgidq gftsa
//
LOCUS       WP_236044230              53 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Methylobacterium ajmalii].
ACCESSION   WP_236044230
VERSION     WP_236044230.1
KEYWORDS    RefSeq.
SOURCE      Methylobacterium ajmalii
  ORGANISM  Methylobacterium ajmalii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024975.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13586.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..53
                     /organism="Methylobacterium ajmalii"
                     /db_xref="taxon:2738439"
     Protein         <1..53
                     /product="transposase"
     Region          <1..52
                     /region_name="transpos_IS5_3"
                     /note="IS5 family transposase; NF033580"
                     /db_xref="CDD:468097"
ORIGIN      
        1 kyefdtalyk erhlieccfa klkqfrrvat ryektarnya amvtiaaivm wlr
//
LOCUS       WP_236044229              76 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Methylobacterium ajmalii].
ACCESSION   WP_236044229
VERSION     WP_236044229.1
KEYWORDS    RefSeq.
SOURCE      Methylobacterium ajmalii
  ORGANISM  Methylobacterium ajmalii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
REFERENCE   1  (residues 1 to 76)
  AUTHORS   Mullin,D.A., Zies,D.L., Mullin,A.H., Caballera,N. and Ely,B.
  TITLE     Genetic organization and transposition properties of IS511
  JOURNAL   Mol Gen Genet 254 (4), 456-463 (1997)
   PUBMED   9180700
REFERENCE   2  (residues 1 to 76)
  AUTHORS   Fischer,J., Maier,H., Viell,P. and Altenbuchner,J.
  TITLE     The use of an improved transposon mutagenesis system for DNA
            sequencing leads to the characterization of a new insertion
            sequence of Streptomyces lividans 66
  JOURNAL   Gene 180 (1-2), 81-89 (1996)
   PUBMED   8973350
REFERENCE   3  (residues 1 to 76)
  AUTHORS   Zekri,S. and Toro,N.
  TITLE     Identification and nucleotide sequence of Rhizobium meliloti
            insertion sequence ISRm6, a small transposable element that belongs
            to the IS3 family
  JOURNAL   Gene 175 (1-2), 43-48 (1996)
   PUBMED   8917074
  REMARK    Erratum:[Gene 1997 Mar 25;188(1):149]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01527.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Methylobacterium ajmalii"
                     /db_xref="taxon:2738439"
     Protein         1..>76
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          1..75
                     /region_name="HTH_ARSR"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; cl46857"
                     /db_xref="CDD:481197"
ORIGIN      
        1 mgtkkhkpee vvaklrqvdv lvsqgqsvad airgigvtev tyyrwrkefg glksdqvrrm
       61 keletvnqrl rkaiad
//
LOCUS       WP_236044243              64 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2793 domain-containing protein, partial [Methylobacterium
            ajmalii].
ACCESSION   WP_236044243
VERSION     WP_236044243.1
KEYWORDS    RefSeq.
SOURCE      Methylobacterium ajmalii
  ORGANISM  Methylobacterium ajmalii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022436.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10983.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..64
                     /organism="Methylobacterium ajmalii"
                     /db_xref="taxon:2738439"
     Protein         1..>64
                     /product="DUF2793 domain-containing protein"
     Region          25..>64
                     /region_name="DUF2793"
                     /note="Protein of unknown function (DUF2793); pfam10983"
                     /db_xref="CDD:431578"
ORIGIN      
        1 mpdaitanls lplmaaaqaq khvthnealv gldtlvqlav ldkdltappa npaegdryli
       61 agaa
//
LOCUS       WP_236044241             238 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Methylobacterium
            ajmalii].
ACCESSION   WP_236044241
VERSION     WP_236044241.1
KEYWORDS    RefSeq.
SOURCE      Methylobacterium ajmalii
  ORGANISM  Methylobacterium ajmalii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
REFERENCE   1  (residues 1 to 238)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Methylobacterium ajmalii"
                     /db_xref="taxon:2738439"
     Protein         <1..238
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <6..170
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            21..54
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 aveamqtiaq kitivqeiar qtdllalnaa veaaragehg rgfavvasev rklaersqta
       61 aaeigtlsad svrvardage mlgrlvpdik rtaglveeit aacreqdvgs aqinqaiqql
      121 dkvtqqnasa seqvsatsee laaqaeqlqa tiayfrigda eagartdaav gqlrraasrm
      181 aapakpkakv aakvapmtaa kspvkasrpa psrpaaasgg fafdmgeded daafkrsa
//
LOCUS       WP_236044304             369 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Methylobacterium ajmalii].
ACCESSION   WP_236044304
VERSION     WP_236044304.1
KEYWORDS    RefSeq.
SOURCE      Methylobacterium ajmalii
  ORGANISM  Methylobacterium ajmalii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
REFERENCE   1  (residues 1 to 369)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 369)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 369)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 369)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Methylobacterium ajmalii"
                     /db_xref="taxon:2738439"
     Protein         <1..369
                     /product="ATP-binding protein"
     Region          <1..367
                     /region_name="PRK13557"
                     /note="histidine kinase; Provisional"
                     /db_xref="CDD:237425"
ORIGIN      
        1 tgglahdfnn llagisgsle lmqarlqqgr lkevdryvaa aqdatrraaa lthrllafsr
       61 rqtldprptd vnrlvagmee lirrtvgpai eiavsgpadl wtvlvdppql enallnlcin
      121 ardampdggr igietghlsl deaaarahem ppgdylslav adtgtgmape vvrrafdpff
      181 ttkpigqgtg lglsmiygft qqsggqvria sevgrgtavt lllprhhgas eaeavraprr
      241 eapraerget vlivddeptv rmlvtevled lgytaieaad gaaglrvlqs daridllvtd
      301 vglpggmngr qmadagralr pglkvlfitg yaenaalgtg qlepgtavlt kpfvvealal
      361 rirrmieqg
//
LOCUS       WP_236044318              88 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein, partial [Methylobacterium
            ajmalii].
ACCESSION   WP_236044318
VERSION     WP_236044318.1
KEYWORDS    RefSeq.
SOURCE      Methylobacterium ajmalii
  ORGANISM  Methylobacterium ajmalii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
REFERENCE   1  (residues 1 to 88)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Methylobacterium ajmalii"
                     /db_xref="taxon:2738439"
     Protein         <1..88
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
     Region          <1..72
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
ORIGIN      
        1 ngtaiftrdg daarefahqi qvgmvginvp ipvpmafhsf ggwkaslfgd hhmhgpegvr
       61 fytrlktitt rwptgiraga efvmptmk
//
LOCUS       WP_236044319              99 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein, partial [Methylobacterium
            ajmalii].
ACCESSION   WP_236044319
VERSION     WP_236044319.1
KEYWORDS    RefSeq.
SOURCE      Methylobacterium ajmalii
  ORGANISM  Methylobacterium ajmalii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
REFERENCE   1  (residues 1 to 99)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Methylobacterium ajmalii"
                     /db_xref="taxon:2738439"
     Protein         <1..>99
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
     Region          <1..>99
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
ORIGIN      
        1 mvpmwmfpva lacgncfvlk pserdpsaal vmaewlkeag lpdgvfsvvq gdkeavdall
       61 hhpdvsavsf vgstpiakyi yetaartgkr aqclggakn
//
LOCUS       WP_236044320             142 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein, partial [Methylobacterium
            ajmalii].
ACCESSION   WP_236044320
VERSION     WP_236044320.1
KEYWORDS    RefSeq.
SOURCE      Methylobacterium ajmalii
  ORGANISM  Methylobacterium ajmalii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
REFERENCE   1  (residues 1 to 142)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Methylobacterium ajmalii"
                     /db_xref="taxon:2738439"
     Protein         <1..>142
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
     Region          <1..142
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
ORIGIN      
        1 mvvmpdadmd qavdalmgaa ygsagercma isvavpigee tadrlmeklv pkvralkvgp
       61 gtdpeaemgp lvtaqhrdkv kgyidrgvqe gaelvvdgrt lslqgyengy fvggtlfdrv
      121 tpemtiykee ifgpvlavar ap
//
LOCUS       WP_236044341              53 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6481 family protein, partial [Methylobacterium ajmalii].
ACCESSION   WP_236044341
VERSION     WP_236044341.1
KEYWORDS    RefSeq.
SOURCE      Methylobacterium ajmalii
  ORGANISM  Methylobacterium ajmalii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040437.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20089.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..53
                     /organism="Methylobacterium ajmalii"
                     /db_xref="taxon:2738439"
     Protein         1..>53
                     /product="DUF6481 family protein"
     Region          1..>51
                     /region_name="DUF6481"
                     /note="Family of unknown function (DUF6481); pfam20089"
                     /db_xref="CDD:437921"
ORIGIN      
        1 mgkfkeaplg drlgtaaaar qamlgrfqar staddpalia rraerqavae ara
//
LOCUS       WP_236044349             247 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Methylobacterium
            ajmalii].
ACCESSION   WP_236044349
VERSION     WP_236044349.1
KEYWORDS    RefSeq.
SOURCE      Methylobacterium ajmalii
  ORGANISM  Methylobacterium ajmalii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
REFERENCE   1  (residues 1 to 247)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Methylobacterium ajmalii"
                     /db_xref="taxon:2738439"
     Protein         <1..247
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <26..239
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
ORIGIN      
        1 lsrnaarsme aatavaaavv eaaagteqva csadqlraai aeiarevgga havaaeavvq
       61 aegaatrvas laqavdqvgq vvtlittiad qtnllalnat ieaaragaag rgfavvaaev
      121 kalaqqtara tgqitgqieg mraaaggsve aitgirdtig rlsagsatis aaveeqsaat
      181 aeiarstrnv sagtdevarl idrvredagd taavatrvta strelggqae amsaavgafl
      241 geiraas
//
LOCUS       WP_236044352             189 aa            linear   BCT 02-MAR-2025
DEFINITION  OB-fold nucleic acid binding domain-containing protein, partial
            [Methylobacterium ajmalii].
ACCESSION   WP_236044352
VERSION     WP_236044352.1
KEYWORDS    RefSeq.
SOURCE      Methylobacterium ajmalii
  ORGANISM  Methylobacterium ajmalii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
REFERENCE   1  (residues 1 to 189)
  AUTHORS   Koonin,E.V., Wolf,Y.I. and Aravind,L.
  TITLE     Protein fold recognition using sequence profiles and its
            application in structural genomics
  JOURNAL   Adv Protein Chem 54, 245-275 (2000)
   PUBMED   10829230
REFERENCE   2  (residues 1 to 189)
  AUTHORS   Bochkarev,A., Pfuetzner,R.A., Edwards,A.M. and Frappier,L.
  TITLE     Structure of the single-stranded-DNA-binding domain of replication
            protein A bound to DNA
  JOURNAL   Nature 385 (6612), 176-181 (1997)
   PUBMED   8990123
REFERENCE   3  (residues 1 to 189)
  AUTHORS   Keshav,K.F., Chen,C. and Dutta,A.
  TITLE     Rpa4, a homolog of the 34-kilodalton subunit of the replication
            protein A complex
  JOURNAL   Mol Cell Biol 15 (6), 3119-3128 (1995)
   PUBMED   7760808
REFERENCE   4  (residues 1 to 189)
  AUTHORS   Ruff,M., Krishnaswamy,S., Boeglin,M., Poterszman,A., Mitschler,A.,
            Podjarny,A., Rees,B., Thierry,J.C. and Moras,D.
  TITLE     Class II aminoacyl transfer RNA synthetases: crystal structure of
            yeast aspartyl-tRNA synthetase complexed with tRNA(Asp)
  JOURNAL   Science 252 (5013), 1682-1689 (1991)
   PUBMED   2047877
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013499.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01336.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Methylobacterium ajmalii"
                     /db_xref="taxon:2738439"
     Protein         <1..189
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
     Region          <7..147
                     /region_name="dnaE2"
                     /note="error-prone DNA polymerase; Validated; PRK05672"
                     /db_xref="CDD:235553"
ORIGIN      
        1 aaplpeiaep pvrliplgeg aavvadyras glslgrhpla flrmglsrdg vsacaalrrl
       61 rdgarvtvag lvlvrqkpgs akgvmfitle detdtanlvi wpslftrqrt lilqaglmaa
      121 rgrvqregev ihlvaehlid rsdllarvae dapgeplavd ggrgdearrg gadargaarp
      181 lrvgsrdfr
//
LOCUS       WP_236044371             545 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail tip lysozyme, partial [Methylobacterium ajmalii].
ACCESSION   WP_236044371
VERSION     WP_236044371.1
KEYWORDS    RefSeq.
SOURCE      Methylobacterium ajmalii
  ORGANISM  Methylobacterium ajmalii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylobacteriaceae; Methylobacterium.
REFERENCE   1  (residues 1 to 545)
  AUTHORS   Xiang,Y., Morais,M.C., Cohen,D.N., Bowman,V.D., Anderson,D.L. and
            Rossmann,M.G.
  TITLE     Crystal and cryoEM structural studies of a cell wall degrading
            enzyme in the bacteriophage phi29 tail
  JOURNAL   Proc Natl Acad Sci U S A 105 (28), 9552-9557 (2008)
   PUBMED   18606992
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037025.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18013.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Methylobacterium ajmalii"
                     /db_xref="taxon:2738439"
     Protein         <1..545
                     /product="phage tail tip lysozyme"
     Region          301..>376
                     /region_name="Phage_lysozyme2"
                     /note="Phage tail lysozyme; pfam18013"
                     /db_xref="CDD:465617"
ORIGIN      
        1 kalngksfav rsyvgeifgi destltalgr nidvfaeqyr asmrkagldp dkaaadgnkl
       61 attwrqigaa idiigakvts rlfgtqdnvf kefldfldrn gdkiaeiiek vvkavialat
      121 allklltske akdfldgils tlgtvdektg kweasidslq talkvfaayv lttwvaklll
      181 afrlvgagwg gllasfgigg fagagllaga giagaataaq lpgqvakgnv dpatggaldt
      241 npmgdigken sgklgklyrr yaptwlggrk pnirygdkpg aggggggggt asigkisrag
      301 naraiidelr aagyndnava aivgsmqtes glnpavpens ynrghiglwq wdrnrwprik
      361 kwiegqggdp mdarwqtkaw iaehnakpgd pmydhprtak ggailrgnpt ideaihgvre
      421 serfgageeg grgakargwl phldtigrev gkatkisdaq viaaddghws rvsralgdkd
      481 faamhgnyqa aqmgginrss tttnsptftt titgisdass aamtidrnnr rltkefferg
      541 vpqgn
//
LOCUS       WP_236045115             345 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: glycosyltransferase [Pseudooceanicola].
ACCESSION   WP_236045115
VERSION     WP_236045115.1
KEYWORDS    RefSeq.
SOURCE      Pseudooceanicola
  ORGANISM  Pseudooceanicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Pseudooceanicola"
                     /db_xref="taxon:1679449"
     Protein         1..345
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=36826
     Region          18..330
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 msilpsfpmp apgsprpril hlvddttpgg vmrmleflat dpalarqagh mimpvprgrv
       61 grlslqadlv vshlsvnwra lprlialrar hpglkivhve hsytegftal nvpsrarfht
      121 llrtayalfd rvvavsegqg twlrdrglvp garltvirsv vdltrfaalp gpqgrprvlg
      181 afgrldrqkg fdtmitafrt lpdpgaelhi fgegseraal ealaaedlrv tfhghvedpv
      241 aamagvdavl mpsrweaygi aalearvagr pliatgidgl rdhaggaevr fvppgavaal
      301 reaiealgpt glgpearrkl avgavaetre gwaaliasle lrpvg
//
LOCUS       WP_236045168             381 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: extracellular solute-binding protein
            [Pseudooceanicola].
ACCESSION   WP_236045168
VERSION     WP_236045168.1
KEYWORDS    RefSeq.
SOURCE      Pseudooceanicola
  ORGANISM  Pseudooceanicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Pseudooceanicola"
                     /db_xref="taxon:1679449"
     Protein         1..381
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=41497
     Region          41..337
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mtigettnmt mnrrtalkft agavaapavl hasdalassg tvkvfawqdy vqpniaekfe
       61 aetgitldlt tfgsndeaes tvranggkgf dvvfpsitnv anyfddageh ffmevpkevn
      121 vdaiipsflr dsaalggmqa gkqvalpfdw gtegvtlnra alpisdadls ygdmfgettt
      181 gkaafrqksa ligvglylda tgevpsnrmy dvykseadar rifgevvkwm varkqhfgaf
      241 wnnateataa fkdagcvigq twdttgllln resadyvyra pkegiitwmd sfgmlrgaen
      301 veqgvafinf mlkpeiggmf anntgynsav tgaadfasde fkkqfnevyr pdvlnnmwww
      361 qsdtpfyapv vnemveiitn a
//
LOCUS       WP_236045273             187 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: aldo/keto reductase [Pseudooceanicola].
ACCESSION   WP_236045273
VERSION     WP_236045273.1
KEYWORDS    RefSeq.
SOURCE      Pseudooceanicola
  ORGANISM  Pseudooceanicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae.
REFERENCE   1  (residues 1 to 187)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 187)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Pseudooceanicola"
                     /db_xref="taxon:1679449"
     Protein         1..187
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=20156
     Region          6..>187
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     Site            order(46,51,76,109)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381296"
ORIGIN      
        1 mpqipslpln dgyalpqlgl gvwqvpgdll ptlipqavgq gcrlidgafi ygneeamgag
       61 lraapvpree lfvttkiwnt dqgfdaaraa legslrrigl dyldlvlihw pcpgqdlyae
      121 twktlvapqt eglvrsigvs nfepahldri taetgvvpal nqveihpglq qsflraenar
      181 rgivtqs
//
LOCUS       WP_236045239             200 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: I78 family peptidase inhibitor [Pseudooceanicola].
ACCESSION   WP_236045239
VERSION     WP_236045239.1
KEYWORDS    RefSeq.
SOURCE      Pseudooceanicola
  ORGANISM  Pseudooceanicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023148.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11720.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Pseudooceanicola"
                     /db_xref="taxon:1679449"
     Protein         1..200
                     /product="I78 family peptidase inhibitor"
                     /calculated_mol_wt=20130
     Region          141..199
                     /region_name="Inhibitor_I78"
                     /note="Peptidase inhibitor I78 family; cl46679"
                     /db_xref="CDD:481019"
ORIGIN      
        1 mppilpkmtr patpragalr alpltlplll alaaceappl erapaapaap lqpqvnaveg
       61 aapvtstdlp pgpgdlagsg sgsdqatatp gddtgsltsd vaqalaatsd tpdtpdegpl
      121 pvpqdelasg gaaaadpsds cgmdpyldlv gqtydesmma drtgpyrvip engqmtmdhr
      181 pdrltihlda agrvaairci
//
LOCUS       WP_236045416             599 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ABC transporter transmembrane domain-containing
            protein [Pseudooceanicola].
ACCESSION   WP_236045416
VERSION     WP_236045416.1
KEYWORDS    RefSeq.
SOURCE      Pseudooceanicola
  ORGANISM  Pseudooceanicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Pseudooceanicola"
                     /db_xref="taxon:1679449"
     Protein         1..599
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=63697
     Region          18..592
                     /region_name="MsbA_rel"
                     /note="ABC transporter, permease/ATP-binding protein;
                     TIGR02204"
                     /db_xref="CDD:131259"
ORIGIN      
        1 marrpkndpa aldressrrv kalaelwpfl rpyrllmlga llaltltasv slilpvavrr
       61 vvdnfntetv glldqyfgaa igiaaalavg tglryalvtv lgdrvvadir kavfarvigm
      121 spafyertmt gevlsrittd ttliqsvigs svsialrntl iffggfamml ltsakltgla
      181 llivplvvvp iltlgrrlrk lsrenqdwia essgnaseal lsvqtvqaft healnraafd
      241 kvteasydaa vrrirtravm tviviflvfa gvvgvlwiga hdvrgggmst gallqfviya
      301 vmvagsvgal seiwgelqra agaterlvel lsirdsvldp aapvavpspv tgeirfddvt
      361 ffypsrpsva alegidltir pgetvavvgp sgagkstliq lilrfydpva gkvrldgval
      421 damarpafrr svalvpqdpv ifadtarani rfgwpeasda eveaaakaaf ahdfiealpg
      481 gydsplgerg vmlsggqkqr iaiarailrd apvllldeat saldaesera vqgaidtlse
      541 grttviiahr latvkkadri ivmeagriva qgthealvae gglyarlarm qftdgpvaa
//
LOCUS       WP_236045438             168 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: transposase [Pseudooceanicola].
ACCESSION   WP_236045438
VERSION     WP_236045438.1
KEYWORDS    RefSeq.
SOURCE      Pseudooceanicola
  ORGANISM  Pseudooceanicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00872.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Pseudooceanicola"
                     /db_xref="taxon:1679449"
     Protein         1..168
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=19251
     Region          <2..25
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     Region          18..>108
                     /region_name="COG4584"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:443641"
     Region          <108..>166
                     /region_name="Transposase_mut"
                     /note="Transposase, Mutator family; cl27632"
                     /db_xref="CDD:474953"
ORIGIN      
        1 mvvqrgtihv wanrtdrmtr mlfilreivl ihdlkrqgvs aiarqiycdg ktvrkyldlg
       61 leppiygsrp prgskldgyh aylldrgadf pgpsgrrlfr elqgkgyesg kfwtkvlsdl
      121 rnrrvqerli avvvglkgfr qvikaalprt riltcivhll rysmnfns
//
LOCUS       WP_236045325             418 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: OpgC domain-containing protein [Pseudooceanicola].
ACCESSION   WP_236045325
VERSION     WP_236045325.1
KEYWORDS    RefSeq.
SOURCE      Pseudooceanicola
  ORGANISM  Pseudooceanicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae.
REFERENCE   1  (residues 1 to 418)
  AUTHORS   Cogez,V., Gak,E., Puskas,A., Kaplan,S. and Bohin,J.P.
  TITLE     The opgGIH and opgC genes of Rhodobacter sphaeroides form an operon
            that controls backbone synthesis and succinylation of osmoregulated
            periplasmic glucans
  JOURNAL   Eur J Biochem 269 (10), 2473-2484 (2002)
   PUBMED   12027885
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021633.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10129.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Pseudooceanicola"
                     /db_xref="taxon:1679449"
     gene            1..418
                     /gene="opgC"
     Protein         1..418
                     /product="OpgC domain-containing protein"
                     /calculated_mol_wt=46543
     Region          6..362
                     /region_name="OpgC"
                     /note="Predicted acyltransferase [General function
                     prediction only]; COG4645"
                     /db_xref="CDD:443683"
ORIGIN      
        1 mealtakryd yldglrgffl ltmtlshlil qgglwltevh frqvmfvesa qgfvflsglm
       61 igivqgrrll rkgeasmras irsrmielwl wtiglvftal lardllpggv eawhnwlata
      121 rlddpvrvfa iltlmfqptf mdilpmyilf maaapmvlrw vmagrwmlav gaaalvwtac
      181 qlgvmqifsi pldqlletgd kqglrmafdp mgwqlpfmag vilgglwvsg qikwenllgp
      241 rtrdlalvag lfmlffaplr iatahglmpd amlkvfapfe qrsnfgpvyl lnfaaaaflf
      301 awlaiggata pqawiralsq gmrwfftrpa lcllgrhslh vyawhvvlvy alryidashs
      361 gggvlvnttl glyvlallwl pplwrerarv paaapvappl igplppqdar iepssrsr
//
LOCUS       WP_236045472             183 aa            linear   BCT 02-MAR-2025
DEFINITION  snapalysin family zinc-dependent metalloprotease [Paractinoplanes
            ovalisporus].
ACCESSION   WP_236045472
VERSION     WP_236045472.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes ovalisporus
  ORGANISM  Paractinoplanes ovalisporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014129.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02031.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Paractinoplanes ovalisporus"
                     /db_xref="taxon:2810368"
     Protein         1..183
                     /product="snapalysin family zinc-dependent
                     metalloprotease"
                     /EC_number="3.4.24.-"
                     /GO_component="GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=19207
     Region          34..158
                     /region_name="ZnMc"
                     /note="Zinc-dependent metalloprotease. This super-family
                     of metalloproteases contains two major branches, the
                     astacin-like proteases and the adamalysin/reprolysin-like
                     proteases. Both branches have wide phylogenetic
                     distribution, and contain sub-families, which...; cl00064"
                     /db_xref="CDD:469599"
ORIGIN      
        1 mllrrlaaal iavvalagvq vagaspaqaa prvlyydasq aqefiavvnq gaqiwnsrat
       61 nvrlepvpag rtpnirvyad ngwpraqtts lgngrvwmgr qavdqgyypp riaahelghi
      121 lglpdrrtgl cadlmsgssa pvsctnsypn arelatvean frssaavapq tyvwqpalag
      181 aag
//
LOCUS       WP_236045498             314 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Paractinoplanes
            ovalisporus].
ACCESSION   WP_236045498
VERSION     WP_236045498.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes ovalisporus
  ORGANISM  Paractinoplanes ovalisporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Paractinoplanes ovalisporus"
                     /db_xref="taxon:2810368"
     Protein         1..314
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=33697
     Region          1..313
                     /region_name="ftrA"
                     /note="transcriptional activator FtrA; Provisional;
                     PRK09393"
                     /db_xref="CDD:181818"
ORIGIN      
        1 mdssagsvai aatdgmlhfe lalaqevfgn apdavqvpwy dvsicgdrtv rvgrfslepd
       61 sgldrlshag tvivpavadi ddtpadlvda vraahrsgar vvslctgafv laaaglldgl
      121 ratthwahte elaarhplve vdpdvlyidn grvltsagka aamdlclhlv rrdhgsavan
      181 lvarrlvvpp hraggqaqfv ttpvpaddgh rlaglfpwil krlnepltve dlarqatmss
      241 rqltrhfhav tgttplqwll tqrirraqel leltgdsidt iaaasgmgta ttlrrhfqrt
      301 lgvapdtyrr tfrk
//
LOCUS       WP_236045439             161 aa            linear   BCT 02-MAR-2025
DEFINITION  dimethylsulfonioproprionate lyase family protein [Pseudooceanicola
            endophyticus].
ACCESSION   WP_236045439
VERSION     WP_236045439.1
KEYWORDS    RefSeq.
SOURCE      Pseudooceanicola endophyticus
  ORGANISM  Pseudooceanicola endophyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Pseudooceanicola.
REFERENCE   1  (residues 1 to 161)
  AUTHORS   Sullivan,M.J., Curson,A.R., Shearer,N., Todd,J.D., Green,R.T. and
            Johnston,A.W.
  TITLE     Unusual regulation of a leaderless operon involved in the
            catabolism of dimethylsulfoniopropionate in Rhodobacter sphaeroides
  JOURNAL   PLoS One 6 (1), e15972 (2011)
   PUBMED   21249136
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028177.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16867.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Pseudooceanicola endophyticus"
                     /db_xref="taxon:2841273"
     Protein         1..161
                     /product="dimethylsulfonioproprionate lyase family
                     protein"
                     /GO_function="GO:0047869 - dimethylpropiothetin
                     dethiomethylase activity [Evidence IEA]"
                     /calculated_mol_wt=16725
     Region          14..155
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 mqgarpaqah gpiaartapv vdrylapala raggtaavap lieaigtlvp qlcwrpradg
       61 pnasegfsaa hanamiagpg glqdrqdiwi glsllapetr ypdhahspee tyltlspgef
      121 rvgsvdwftp giggsfyvpp aethamksgd tpllalwalr a
//
LOCUS       WP_236045725             767 aa            linear   BCT 02-MAR-2025
DEFINITION  SpoIIE family protein phosphatase [Streptacidiphilus fuscans].
ACCESSION   WP_236045725
VERSION     WP_236045725.1
KEYWORDS    RefSeq.
SOURCE      Streptacidiphilus fuscans
  ORGANISM  Streptacidiphilus fuscans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptacidiphilus.
REFERENCE   1  (residues 1 to 767)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Streptacidiphilus fuscans"
                     /db_xref="taxon:2789292"
     Protein         1..767
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=80532
     Region          <77..>322
                     /region_name="EAL"
                     /note="EAL domain. This domain is found in diverse
                     bacterial signaling proteins. It is called EAL after its
                     conserved residues and is also known as domain of unknown
                     function 2 (DUF2). The EAL domain has been shown to
                     stimulate degradation of a second...; cl29561"
                     /db_xref="CDD:453023"
     Region          176..321
                     /region_name="GAF_2"
                     /note="GAF domain; pfam13185"
                     /db_xref="CDD:433019"
     Region          325..764
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
ORIGIN      
        1 mepgsrdrad egaeaewrsg vgvagaeaga dplpgmfara pvvfaalsgp dhllqganqa
       61 ffetvggerg rdalgremlg rpvgdavpel vpqgllslld svylqgrpiv tsnvavllgs
      121 vgagrlryfd isleprrdqd grvqgiaflg vdvtrqraah klaaeqqall eqiardapla
      181 evldgmcrai eklsphvlss vllldesgtr llhgaapslp dfyneaidgc eigpregscg
      241 taayrremvv vneiatdplw tdyrelagqa glaacwsspv msstgellgt famyhrtprp
      301 lreedldlsi vftrtaalai erhrteiarh raherehtls sdlefvlrts tavseearyp
      361 qnlqrlaqla vptlgpvcvi dvledgrvrr vavalaaglp draaallaag asahasdgas
      421 drssahasah tedgpvgrvl atgrtevsra apgagwrelg lditgricvp ltarghtfga
      481 ltvvatadrp lgprtivlae elartaaaga ettrqhaqra rlahdlqagl llaalpdvpg
      541 vrlaasyrpa gegldiggdf ydifplpgdr wglvigdvcg rgahaattta lvrntarava
      601 pllptpgava davnaallar pdsdesfvtl iyaelrrehg vhgepagvav smvraghppp
      661 vlhradgtvy apspsgellg vspepelvme sftlrsgdhl vlvtdgilea rdpagtffge
      721 erlvsalrpt agaadarril daltdavdgf tggltdddqa alvvvae
//
LOCUS       WP_236045752             210 aa            linear   BCT 02-MAR-2025
DEFINITION  maleylpyruvate isomerase N-terminal domain-containing protein
            [Streptacidiphilus fuscans].
ACCESSION   WP_236045752
VERSION     WP_236045752.1
KEYWORDS    RefSeq.
SOURCE      Streptacidiphilus fuscans
  ORGANISM  Streptacidiphilus fuscans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptacidiphilus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11716.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Streptacidiphilus fuscans"
                     /db_xref="taxon:2789292"
     Protein         1..210
                     /product="maleylpyruvate isomerase N-terminal
                     domain-containing protein"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=22299
     Region          23..208
                     /region_name="TIGR03083"
                     /note="uncharacterized Actinobacterial protein TIGR03083"
                     /db_xref="CDD:274422"
ORIGIN      
        1 misesylava eaavsllghr svadawdeps alagyavsgl aghlagqvsv vakaldgpep
       61 atepvalldy flqarwidae qdsevhrgir gsgeqyaevg phalaartae vldrlrrdlp
      121 rqrpdrvvqf pwgppslrld dlltnrmmel vvhlddlavs vgmptpelpa aatdavvall
      181 atlaarrhga vpvlraltra erapdtiaaf
//
LOCUS       WP_236045844             438 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Streptacidiphilus fuscans].
ACCESSION   WP_236045844
VERSION     WP_236045844.1
KEYWORDS    RefSeq.
SOURCE      Streptacidiphilus fuscans
  ORGANISM  Streptacidiphilus fuscans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptacidiphilus.
REFERENCE   1  (residues 1 to 438)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 438)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Streptacidiphilus fuscans"
                     /db_xref="taxon:2789292"
     Protein         1..438
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=46423
     Region          6..415
                     /region_name="PRK15481"
                     /note="transcriptional regulatory protein PtsJ;
                     Provisional"
                     /db_xref="CDD:185378"
ORIGIN      
        1 mdpvdiegrt srevvdsver avrdgraapg dvlpsvrala shlqispatv aaayrdlrir
       61 gvltsevgrn trisarppli srapaavpag ardlsdgnpd pelmpsvtra ahgvdlghhg
      121 ysspsmlpal vvqatrqfae lgvteeqlcl aggamdgver vlsawlrpgd qvlvedpcyt
      181 gvldlvracg ltavpvavde rglvpdalra altgksaalv ltpraqnptg aaldavraae
      241 lasvlerred vlvvendhmg pmagsdfftl tagrprwavi rsvskslgpd lrlayvagdt
      301 mtvsrvegrq rlgsgwvshi lqqivvelse dpgvhdlvrq aertyltrre allselaarg
      361 vaasgrsgln vmipvqeeaa tlrqlqergw llragephrl asapfvratt atlhpeeaae
      421 laaavaesvr pqrgtrsv
//
LOCUS       WP_236045855             572 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Streptacidiphilus fuscans].
ACCESSION   WP_236045855
VERSION     WP_236045855.1
KEYWORDS    RefSeq.
SOURCE      Streptacidiphilus fuscans
  ORGANISM  Streptacidiphilus fuscans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptacidiphilus.
REFERENCE   1  (residues 1 to 572)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 572)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 572)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 572)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Streptacidiphilus fuscans"
                     /db_xref="taxon:2789292"
     Protein         1..572
                     /product="ATP-binding protein"
                     /calculated_mol_wt=60184
     Region          <32..557
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          128..357
                     /region_name="KdpD"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; COG2205"
                     /db_xref="CDD:441807"
ORIGIN      
        1 mlptvavvvt wlgaliavpa dgrwavvvcg lvatlvtagl sfeaarrgra laeltrqrqe
       61 rehflhgrmt aqeaqllhla devlprgver iqrgdfiedi ltesaapdgt vapelqaaae
      121 aalrtvleav daeetlresa qrafvniarr vqaivhrqaq dlramedrhg edpavfddll
      181 rldhgnalvg rladsiavlg garpgrqwgr svplysvlrg amsrildyqr velhpvseva
      241 vigpavepli halaelldna tryspphtrv hltavevqsg iaveiedggl slseegrara
      301 ermlreaqag idlndlgetp rlglavvgrl arangfqvsl rpsayggvra vlvvprelit
      361 tapgtgmahg igvasgprvv gsnerhrsgv rqpaaavnyd avaaalsgpt veaprpepvs
      421 fgsangdgef gqtgfrslef gspgfgsaef ggaefghaes ggrdfggrdf ggtefgedps
      481 gateprvagl pqrrrrslrp dlagkrvvvp eqtgepavsg sgpgspggrs etsyeqqgvq
      541 pglwlaafqs gvsdpqangs edstgsgerg dh
//
LOCUS       WP_236045872            1163 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Streptacidiphilus fuscans].
ACCESSION   WP_236045872
VERSION     WP_236045872.1
KEYWORDS    RefSeq.
SOURCE      Streptacidiphilus fuscans
  ORGANISM  Streptacidiphilus fuscans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptacidiphilus.
REFERENCE   1  (residues 1 to 1163)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 1163)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 1163)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 1163)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Streptacidiphilus fuscans"
                     /db_xref="taxon:2789292"
     Protein         1..1163
                     /product="ATP-binding protein"
                     /calculated_mol_wt=121240
     Region          8..182
                     /region_name="chemoreceptor_sensor"
                     /note="4-helix bundle ligand binding sensor domain of
                     chemoreceptors such as Tar or Tsr; cl00144"
                     /db_xref="CDD:444710"
     Region          163..642
                     /region_name="COG4251"
                     /note="Bacteriophytochrome (light-regulated signal
                     transduction histidine kinase) [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443393"
     Region          415..642
                     /region_name="KdpD"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; COG2205"
                     /db_xref="CDD:441807"
ORIGIN      
        1 mrryalsnwk irtrltalli lpviaaivlg glriqgslqt qqqldnvskl gdvaqaatll
       61 aislenerdd malasgpgsn pltadavvfd mkqtatkqtk lttlvdsldk tqlpgggvdi
      121 nnvltrlnql qtiqssafqa tqggdlqkti aafdslitpl tqitqdlala ssnlqlvqat
      181 rslqaftawh edmaivrstl taalvntdsn nvpvanalqa sdrvyalaaf qdaatqqhef
      241 talytadkan aligpwqnns vyqettqfaq qvltstqpls aqqnllnsqd wfqksgtimq
      301 qmgldesflv qelnntaatl rsnaatdayv naglivlvll vavlgaglva rsmvrtlakl
      361 qetaedvaeh tlpemvrkls eadpqdvdvt iepigidttd eighvarafd kvhsqavrla
      421 aeqallrgni namftnlsrr sqgliqrqls miselesrea dpdqlaqlfk ldhlatrmrr
      481 ngenllvlag edpgrrwtrp vplvdvlraa aseveqyeri elasvptadv agrvvndlvh
      541 llaellenat sfsspqtrvk vtghalpdgr vlveihdtgi glspddlaei nerlanppvv
      601 dvsvsrrmgl fvvgrlslrh giriqlrpsd sggttalvml pvdvtnvaer ragsgapaag
      661 aagqrpaapg gpqrtplgsg pqgapggsga pgalggsglg gpgslaggpn prpslpqqsq
      721 qpglpagaga psgstqsglp rrggqpqggg qtggfdggqt dgrgmptaas aqsglpqrgg
      781 qpgqsgqsgq pgqtgqqgqf gqqgpgqqqg gwnpgqtdgr glsipgagqs gdadfgagsg
      841 lpqrggqrsg qqpgqqpggf dpsrtngrgi pipglgqgad sgpgaggfdp srtdgrglpi
      901 dsgfpapaqp qapqppvaqp pqpyegglws eqpqhgspag qplggdtgqf prsryeeeap
      961 arpapaepqp fpqrpqpdas dpltralpaa etganssspi feqmettwfr agraermrgv
     1021 qvsadelsaq qpdprqaqap shaqqparpg qpagasavsg mgdgqapwrs sandetwrra
     1081 eqvrepsagg mmpsglprrv pkanlvpgta easslpgpqv srspdevrgr ltnlrrgiqq
     1141 graagaagpd qgngaygsnp qer
//
LOCUS       WP_236045741              85 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6296 family protein [Streptacidiphilus fuscans].
ACCESSION   WP_236045741
VERSION     WP_236045741.1
KEYWORDS    RefSeq.
SOURCE      Streptacidiphilus fuscans
  ORGANISM  Streptacidiphilus fuscans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptacidiphilus.
REFERENCE   1  (residues 1 to 85)
  AUTHORS   Rui,Z., Li,X., Zhu,X., Liu,J., Domigan,B., Barr,I., Cate,J.H. and
            Zhang,W.
  TITLE     Microbial biosynthesis of medium-chain 1-alkenes by a nonheme iron
            oxidase
  JOURNAL   Proc Natl Acad Sci U S A 111 (51), 18237-18242 (2014)
   PUBMED   25489112
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040047.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19813.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Streptacidiphilus fuscans"
                     /db_xref="taxon:2789292"
     Protein         1..85
                     /product="DUF6296 family protein"
                     /calculated_mol_wt=8783
     Region          3..83
                     /region_name="DUF6296"
                     /note="Family of unknown function (DUF6296); pfam19813"
                     /db_xref="CDD:437645"
ORIGIN      
        1 madetttyel vfsstdsgsa ddggpgdvvl vhpsgatgpg gspvyrdesg iiqveindnc
       61 earllstsay qrhrrvegcr rvaag
//
LOCUS       WP_236046172             256 aa            linear   BCT 02-MAR-2025
DEFINITION  TetR family transcriptional regulator [Streptacidiphilus fuscans].
ACCESSION   WP_236046172
VERSION     WP_236046172.1
KEYWORDS    RefSeq.
SOURCE      Streptacidiphilus fuscans
  ORGANISM  Streptacidiphilus fuscans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptacidiphilus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012655.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00440.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Streptacidiphilus fuscans"
                     /db_xref="taxon:2789292"
     Protein         1..256
                     /product="TetR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=27361
     Region          12..>145
                     /region_name="mycofact_TetR"
                     /note="mycofactocin system transcriptional regulator;
                     TIGR03968"
                     /db_xref="CDD:188483"
ORIGIN      
        1 mgaaaagada tkpaptmrds lvkaafqlfl drgfeqttid divalagvgr rsffryfpsk
       61 edvvfpdheg clvemteylr dapadgdpvq qvceaarlvl rmyaadplfs vqryrltrev
      121 pglrahelsv vwryelalae hlrergagra dgalradvva aavvaahnha lrtwlradge
      181 gdvqaamnea lgyvarafsd taeprdasad aggaasvsgg gvrgenpdee vvvllarkgt
      241 plwrvvrdve dalggs
//
LOCUS       WP_236046199             693 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6055 domain-containing protein [Paractinoplanes ovalisporus].
ACCESSION   WP_236046199
VERSION     WP_236046199.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes ovalisporus
  ORGANISM  Paractinoplanes ovalisporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039970.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19527.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Paractinoplanes ovalisporus"
                     /db_xref="taxon:2810368"
     Protein         1..693
                     /product="DUF6055 domain-containing protein"
                     /calculated_mol_wt=72123
     Region          34..436
                     /region_name="DUF6055"
                     /note="Family of unknown function (DUF6055); pfam19527"
                     /db_xref="CDD:437359"
     Region          444..687
                     /region_name="CelA1"
                     /note="Cellulase/cellobiase CelA1 [Carbohydrate transport
                     and metabolism]; COG5297"
                     /db_xref="CDD:444099"
     Region          599..689
                     /region_name="CBM_2"
                     /note="Cellulose binding domain; cl21579"
                     /db_xref="CDD:451319"
ORIGIN      
        1 msparkvall vsslalalvs gitapaafaa ekavyipasw kstgevpwsq drtkesanfi
       61 llwgeksgtn pkaapapytf dpdnilsqle slyafyndtm kftvtaqyki dvivtqawnr
      121 teldawatgg sadgrvgvin iapgaalpgs wglahelghv fqnltflgks gsgftnasag
      181 tfweasaeym amqvypdgga gdltrflrte nlaysssrhh ygawmliqyf edrqpgifnr
      241 vwaearsteh pletyarllg lsqsqlnvel aryaqhqvty dysnqshfqk fidslyggaf
      301 inayngvpve avnqaaghya isdalapsdy gynkirlvpt sdvirlhfkg hvnsaagsgw
      361 sygfvavsps gvprygpvst asdgqisfal qsgekdvylv vagapaavhk yafldgytkn
      421 yrypyefgia gavpsgyepg hvkpaatggg rwhsngggwv dsrasvasta yvgpraavfg
      481 natvsgnari eglawvnsgg tvsgnavvkd naivqggvnl sgsvvvggda epagtcgsgt
      541 yllfnsdrgc dgragesdin payarfssae vavtdggtpt ptptptvspt tpppagrscs
      601 arlaivgswt ggfqgevtvt agsggtsgwt atwtlasgqr vtqswgatvs asgstvtasn
      661 agwngtlaag ssttfgflae gagtaptltc aat
//
LOCUS       WP_236046200             166 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4265 domain-containing protein [Paractinoplanes ovalisporus].
ACCESSION   WP_236046200
VERSION     WP_236046200.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes ovalisporus
  ORGANISM  Paractinoplanes ovalisporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025451.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14085.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Paractinoplanes ovalisporus"
                     /db_xref="taxon:2810368"
     Protein         1..166
                     /product="DUF4265 domain-containing protein"
                     /calculated_mol_wt=18683
     Region          32..142
                     /region_name="DUF4265"
                     /note="Domain of unknown function (DUF4265); pfam14085"
                     /db_xref="CDD:433706"
ORIGIN      
        1 mvahndsrpp gmfqvafdlp qesatwppfs teriwakkts apyqlevqsv pffvrdlsrg
       61 diirakpdhe rrelvfdglv rhsghstirv ilrdktdenr drvlemfraa gssweftsvd
      121 fhfavdlpge vdyrslrsml veatstgaie veeafvapah vaqlda
//
LOCUS       WP_236046201             449 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Paractinoplanes ovalisporus].
ACCESSION   WP_236046201
VERSION     WP_236046201.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes ovalisporus
  ORGANISM  Paractinoplanes ovalisporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 449)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 449)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 449)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 449)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Paractinoplanes ovalisporus"
                     /db_xref="taxon:2810368"
     Protein         1..449
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=47822
     Region          51..437
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mrkvsvtllc ltvalttaac gsdddsggnt aakptnctnk vvheeaprvl vwawypnmak
       61 vvdnfnnqht dvqvcwtnag qgqpeyekfq taisakkgap dvimleadql vgfeiqdalv
      121 dlapfgandv kknfsegawk dvsqgdavya ipvdggpmal iyrtdvfdky qikppktwde
      181 yaasaakvka aggpvfgdfg snvpavttal miqkgavpfv ydladkqnit iklddqatkd
      241 vltywgelaa kglvgkedqf ttdyiagmvg gkyatyvsaa wapgyltgsg vgagkdkgkf
      301 avaplpqwdp anpvsvnwgg safavtsqaa dkalaakvam giyadeaslt dgwktqtifp
      361 lnqgvltsde fvnakvdffn gqtankdiyi paenaykgav yspftvfyya qlqaqivkil
      421 ggktsgaqaa tdlhnqivey aksqgftvk
//
LOCUS       WP_236046152            1346 aa            linear   BCT 02-MAR-2025
DEFINITION  SpoIIE family protein phosphatase [Streptacidiphilus fuscans].
ACCESSION   WP_236046152
VERSION     WP_236046152.1
KEYWORDS    RefSeq.
SOURCE      Streptacidiphilus fuscans
  ORGANISM  Streptacidiphilus fuscans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptacidiphilus.
REFERENCE   1  (residues 1 to 1346)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1346
                     /organism="Streptacidiphilus fuscans"
                     /db_xref="taxon:2789292"
     Protein         1..1346
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=142981
     Region          26..263
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          <453..539
                     /region_name="GAF_2"
                     /note="GAF domain; cl21515"
                     /db_xref="CDD:473894"
     Region          <663..780
                     /region_name="PtsP"
                     /note="Signal transduction protein containing GAF and PtsI
                     domains [Signal transduction mechanisms]; COG3605"
                     /db_xref="CDD:442824"
     Region          767..1195
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
     Region          1206..1322
                     /region_name="RsbW"
                     /note="Anti-sigma regulatory factor (Ser/Thr protein
                     kinase) [Signal transduction mechanisms]; COG2172"
                     /db_xref="CDD:441775"
ORIGIN      
        1 mrsdeqgggp garraaaggq arpgglltip iatalieddg rilhwsadae lllgytatda
       61 vgryaadllt tpesrpevvq lfesivagrs wsgvfpvrhr dghlvnlefr thpltgpngh
      121 plvlavasdv rslrrlqsnl avldsfftqs pvgmavyddk mrfvrlnhal aeingltieq
      181 hlgrtisevl pglngeeiea vmrsvltsge pvvdarshgt tpgdpeheha wsaayfrlee
      241 ptsgrvlgvs stivdvtery laesragrar erlqilfdan srigttldlv rtareladtm
      301 vpkvadlaav fvlerlvsgd pdadeeghep ggagrahpha hhhvhggdgd gddaavgsig
      361 ssppidrvrr lavasagtgp arqagsadia vfdippdsay avamatgrtv tlppdqpgrl
      421 latllgangq hsaaaptgag passstafgs tafgspvfgs aeptveqmvr qfadhaagsa
      481 saaqdgdelg pvritplvar gsvlgmvvyl rrpgpeafes edvtlgdela araavaidna
      541 rlylrehqtl lerqqtlaqa naarerlalv neatkrigtt ldlqrtalel gevgtqglad
      601 avvvevleel vsdtgeaagp rgpadrsall rrlafhtrpg agmnpvapvg dvhrfhpatp
      661 yawclahrrp vlvpqvdeqa lrwfdadpar aqavlddgir tfmvvpliar gmalgvaafy
      721 rtvtdrpfda edlalagela araavsidna rlftrerdas lareqalvea heaqarlall
      781 ndastrigtt ldlqrtaeel velviprfad fvtvdlldsv vengfgddep hipedgrvll
      841 ravavgevng idmvgaadqv gqasqsaavy aeslrtgrsi lidqvdesal hritahpdrv
      901 epalkagvhs ylmvpllarg avlggaefir mvnpvpfspe dvalaeelaa raaiaidnar
      961 lyrrerntal mlqhallpqe irttpgldia yrylpasvms evggdwfdvv pltcgrvalv
     1021 vgdvmghgmq aaasmgqlrt aartliamdl apdrvlrrld etaaavgegq fatcvvavfd
     1081 pvdgsvsiac aghlppvlvd pdgtarllel ptgaplgvgg vpfrsveftl agdavlclyt
     1141 dglverrgrd ldvgldllcr tvaekrasle ercdavldal tarsseddia vimaqalrrq
     1201 tdwiatlels gdpevvgkar hfvratlagw gldslsdvae llvsevvsna llhadqptql
     1261 rlirdrvlti avtdtdarap rlrhasmede ggrgmhlvne larrwgsral angkvvwiel
     1321 elphwvtgpt etpaggdgdg lvtngl
//
LOCUS       WP_236046156             248 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6084 family protein [Streptacidiphilus fuscans].
ACCESSION   WP_236046156
VERSION     WP_236046156.1
KEYWORDS    RefSeq.
SOURCE      Streptacidiphilus fuscans
  ORGANISM  Streptacidiphilus fuscans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptacidiphilus.
REFERENCE   1  (residues 1 to 248)
  AUTHORS   Shao,L., Zi,J., Zeng,J. and Zhan,J.
  TITLE     Identification of the herboxidiene biosynthetic gene cluster in
            Streptomyces chromofuscus ATCC 49982
  JOURNAL   Appl Environ Microbiol 78 (6), 2034-2038 (2012)
   PUBMED   22247174
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039986.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19562.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Streptacidiphilus fuscans"
                     /db_xref="taxon:2789292"
     Protein         1..248
                     /product="DUF6084 family protein"
                     /calculated_mol_wt=26957
     Region          1..213
                     /region_name="DUF6084"
                     /note="Family of unknown function (DUF6084); pfam19562"
                     /db_xref="CDD:437394"
ORIGIN      
        1 mtgldfacte vraepyaagp tllfrvrita qgepqrvhal alrcqfriep arrhysepea
       61 qrlgdlfger srwgstlhpl qfaqvgvvvp gftgstevel pvpvsydldi aatrysdala
      121 egevpllllf sgtafrgagg fqvepvpwdk eavcrmpvav wreaidghfp gcgwirlprd
      181 tmaalqayrs rhalpsweat verllhdaee eaepdpvava avravsafpt vptvtataav
      241 rtaegslr
//
LOCUS       WP_236046207             865 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase HerA domain-containing protein [Paractinoplanes
            ovalisporus].
ACCESSION   WP_236046207
VERSION     WP_236046207.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes ovalisporus
  ORGANISM  Paractinoplanes ovalisporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 865)
  AUTHORS   Huang,Q., Liu,L., Liu,J., Ni,J., She,Q. and Shen,Y.
  TITLE     Efficient 5'-3' DNA end resection by HerA and NurA is essential for
            cell viability in the crenarchaeon Sulfolobus islandicus
  JOURNAL   BMC Mol Biol 16, 2 (2015)
   PUBMED   25880130
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 865)
  AUTHORS   Rzechorzek,N.J., Blackwood,J.K., Bray,S.M., Maman,J.D.,
            Pellegrini,L. and Robinson,N.P.
  TITLE     Structure of the hexameric HerA ATPase reveals a mechanism of
            translocation-coupled DNA-end processing in archaea
  JOURNAL   Nat Commun 5, 5506 (2014)
   PUBMED   25420454
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 865)
  AUTHORS   Constantinesco,F., Forterre,P., Koonin,E.V., Aravind,L. and Elie,C.
  TITLE     A bipolar DNA helicase gene, herA, clusters with rad50, mre11 and
            nurA genes in thermophilic archaea
  JOURNAL   Nucleic Acids Res 32 (4), 1439-1447 (2004)
   PUBMED   14990749
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014044.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01935.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Paractinoplanes ovalisporus"
                     /db_xref="taxon:2810368"
     Protein         1..865
                     /product="helicase HerA domain-containing protein"
                     /calculated_mol_wt=92926
     Region          <167..663
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          458..837
                     /region_name="HerA"
                     /note="Archaeal DNA helicase HerA or a related bacterial
                     ATPase, contains HAS-barrel and ATPase domains
                     [Replication, recombination and repair]; COG0433"
                     /db_xref="CDD:440202"
ORIGIN      
        1 mlaaeeehan dlaenwlvsa qeetavgler wgvpntvkpp qqvateisrl iactgaslfa
       61 vdqidpvfaq artsvvgggs gssvyepval aadlggglmq mrevlsrtvt vvaclwtswt
      121 liernsvasv sgrfrteahl sripsaaiaa elvaarfepf lemadfkppl ptwpvapeaf
      181 rhamdftprg llqrvdrhiq aclaadevtl lddlaqeeld pkpidptppp pdrltvlder
      241 larlraeavi daalapated remsrllvag lqawtieqge rrgrysvkpg geaspsmhaw
      301 lvetldeete deahwsfral ahtnalavqa rlrrlldfvn ldpaitkrra vllrngnwpn
      361 gkvsqrmkqd yldrggvltg vsdddlrtfa alakllderd palpdwllar rpagntalfa
      421 qvfgpppsgg statpepeep sgppeatept agpddqvgps lelgtmtetg epvraplesl
      481 rkhavifags gsgktvlikr lieqcalngv saivldpnnd larlgdewpe apktwrpgda
      541 graatylagt dvvvwtprrm sgrpvsfqpl pdfstvldep defglaldsa vaalaprarm
      601 agntakadrg railrqaldy fartrngdls rfvdmlsdlp egaaslgrar elaadmaetl
      661 raamvndpmf ggsgetldpa vlltpapgkr arisvislig lsndeqrqsf vnqlqmalfa
      721 wiklnpagdr plgglfvmde aqtfvpsgpm tactestlal asqarkyglg lvfatqapkg
      781 ihnriignaa tqfygflnsp vqiaaareva aakgsavldi srleagqfyt vgegtpfrrv
      841 svpmslsyhp ksalsaeevl arara
//
LOCUS       WP_236046209             203 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Paractinoplanes ovalisporus].
ACCESSION   WP_236046209
VERSION     WP_236046209.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes ovalisporus
  ORGANISM  Paractinoplanes ovalisporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 203)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 203)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Paractinoplanes ovalisporus"
                     /db_xref="taxon:2810368"
     Protein         1..203
                     /product="VOC family protein"
                     /calculated_mol_wt=21577
     Region          15..137
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mklevvvvpv tdvdraktyy tglgwrldad fstdeglrvv qvtppgspas vifghlvtaq
       61 apgtaqglhl ivsdieaard elkragadps dvfhdaggvf hhggtdgrvp gpdpkrssyg
      121 sflsfsdpdg ngwilqeitn rlpgrldpsv ttysggadla aalrraaaah geheartgqe
      181 danwpdwyad ymvkeqsgae lpr
//
LOCUS       WP_236046210             517 aa            linear   BCT 02-MAR-2025
DEFINITION  PEP/pyruvate-binding domain-containing protein [Paractinoplanes
            ovalisporus].
ACCESSION   WP_236046210
VERSION     WP_236046210.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes ovalisporus
  ORGANISM  Paractinoplanes ovalisporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 517)
  AUTHORS   Lim,K., Read,R.J., Chen,C.C., Tempczyk,A., Wei,M., Ye,D., Wu,C.,
            Dunaway-Mariano,D. and Herzberg,O.
  TITLE     Swiveling domain mechanism in pyruvate phosphate dikinase
  JOURNAL   Biochemistry 46 (51), 14845-14853 (2007)
   PUBMED   18052212
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01326.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Paractinoplanes ovalisporus"
                     /db_xref="taxon:2810368"
     Protein         1..517
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0016310 - phosphorylation [Evidence IEA]"
                     /calculated_mol_wt=53146
     Region          184..513
                     /region_name="PRK05878"
                     /note="pyruvate phosphate dikinase; Provisional"
                     /db_xref="CDD:235635"
ORIGIN      
        1 mifwlsphlt qptaligaka qglvtlmrlg lpvpaafvia ipprpagrpa ppppptanhd
       61 avrpappppa taapdpaqpa ppppatathd ptqpappppa tathdptqla psspataahh
      121 papsppaaat pdpdqlapsa pttatydpar papanwtdvr ahrsllpsde alktavvrlg
      181 aeavsvrsga avsmpgmmnt vldvrgpvap avhevveswn trravayrdl hgiphdlgta
      241 vivqamvhgd rddrsgsgva fsrnpgsgsp epygdvlfgd rgdavvsgec dtlpltalhd
      301 reptvwtelv saltrleahy rdachveftf esgrlwllqv rpggltpraa vrvavdlade
      361 glidcseavr rvsphqlkaa vtprmaaaei ltrgrgaspg vatgrvalta dnavrmsgpv
      421 ilvrpvtspl dmhglaaaag vvtsrggpts haavvarglg kpavvgaagl dqltegtlit
      481 idgssgeial gevpsapges dphlrrlltw aaathrh
//
LOCUS       WP_236046339             381 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 N-terminal domain-containing protein
            [Streptacidiphilus fuscans].
ACCESSION   WP_236046339
VERSION     WP_236046339.1
KEYWORDS    RefSeq.
SOURCE      Streptacidiphilus fuscans
  ORGANISM  Streptacidiphilus fuscans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptacidiphilus.
REFERENCE   1  (residues 1 to 381)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00933.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Streptacidiphilus fuscans"
                     /db_xref="taxon:2789292"
     Protein         1..381
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=39333
     Region          48..>380
                     /region_name="BglX"
                     /note="Periplasmic beta-glucosidase and related
                     glycosidases [Carbohydrate transport and metabolism];
                     COG1472"
                     /db_xref="CDD:441081"
ORIGIN      
        1 mteaaksmsr rgalfagagl aaaaaglvsa gpasaasrpa aqseltrltp rqqaaqrvvf
       61 sypgatvprs lldliaegla ggvilfgdnv tslaqitaav aamkearrrs pvsspllvmt
      121 dqeggevrri pggptlsekq igesahpsaa aadagrqage llrgagvnvn lapvldvfrt
      181 pgdfddefqr syssdprvaa rcgaafiraq qahgvaatak hfpglgsatk eqntdvgpvt
      241 ltasraqlrs ideypyppai dagvrlvmvs watyphldpd rpaglseriv kgelrgrlgf
      301 rgvtvtdain agaltpfgte sqnavsaana gmdlilectr svsagvtvvd glakaltddr
      361 lsrsefdaai ariealrwal s
//
LOCUS       WP_236046529             481 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Streptacidiphilus fuscans].
ACCESSION   WP_236046529
VERSION     WP_236046529.1
KEYWORDS    RefSeq.
SOURCE      Streptacidiphilus fuscans
  ORGANISM  Streptacidiphilus fuscans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptacidiphilus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Streptacidiphilus fuscans"
                     /db_xref="taxon:2789292"
     Protein         1..481
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=49721
     Region          29..450
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(36..37,40..41,44,76,126..127,129..131,134,157,
                     160..161,164,251,254..255,311..313,316,344,348,397..398,
                     402,406,422,425..426,429..430,433)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340879"
ORIGIN      
        1 mtaasdlsaa qgaqadtrka fsgtmmtpll igvalnpins tmiatalvsi gtafgvgvss
       61 tawlvailyl asavgqptmg kladligprr ifltgllmvv aaglvgalap afgwliasrv
      121 llgigtsaay psamamlrae trrtgveapr tvlgrlslas lssaavgpvl ggalaatlgw
      181 ravfavnipl avvafllalr wvpgevrgev rgeaprasgd gagdrtrmpl ltlidlpgit
      241 lfaatiaalm lflmnlsrpq wlllgltlvl avalvrwqlr aahpfldlrl lgrnpgltrt
      301 flrtgltylv lycmlygysq wlqdghgfna fhaglialpm sataalfsll gartrtlrap
      361 lialtlllta gsallltvdh rssvlllvlv salfgvgqgl asscnqaaly aqapkdgvga
      421 aaglqrtsiy lgailsssvi allygtratd ggvhgvavvm gvlcvalial ttadralrqr
      481 r
//
LOCUS       WP_236046665             157 aa            linear   BCT 02-MAR-2025
DEFINITION  nitroreductase/quinone reductase family protein [Paractinoplanes
            ovalisporus].
ACCESSION   WP_236046665
VERSION     WP_236046665.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes ovalisporus
  ORGANISM  Paractinoplanes ovalisporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Gurumurthy,M., Rao,M., Mukherjee,T., Rao,S.P., Boshoff,H.I.,
            Dick,T., Barry,C.E. 3rd and Manjunatha,U.H.
  TITLE     A novel F(420) -dependent anti-oxidant mechanism protects
            Mycobacterium tuberculosis against oxidative stress and
            bactericidal agents
  JOURNAL   Mol Microbiol 87 (4), 744-755 (2013)
   PUBMED   23240649
REFERENCE   2  (residues 1 to 157)
  AUTHORS   Singh,R., Manjunatha,U., Boshoff,H.I., Ha,Y.H., Niyomrattanakit,P.,
            Ledwidge,R., Dowd,C.S., Lee,I.Y., Kim,P., Zhang,L., Kang,S.,
            Keller,T.H., Jiricek,J. and Barry,C.E. 3rd.
  TITLE     PA-824 kills nonreplicating Mycobacterium tuberculosis by
            intracellular NO release
  JOURNAL   Science 322 (5906), 1392-1395 (2008)
   PUBMED   19039139
REFERENCE   3  (residues 1 to 157)
  AUTHORS   Manjunatha,U.H., Boshoff,H., Dowd,C.S., Zhang,L., Albert,T.J.,
            Norton,J.E., Daniels,L., Dick,T., Pang,S.S. and Barry,C.E. 3rd.
  TITLE     Identification of a nitroimidazo-oxazine-specific protein involved
            in PA-824 resistance in Mycobacterium tuberculosis
  JOURNAL   Proc Natl Acad Sci U S A 103 (2), 431-436 (2006)
   PUBMED   16387854
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016001.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04075.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Paractinoplanes ovalisporus"
                     /db_xref="taxon:2810368"
     Protein         1..157
                     /product="nitroreductase/quinone reductase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=17235
     Region          43..138
                     /region_name="Pyridoxine 5'-phosphate (PNP) oxidase-like
                     and flavin reductase-like proteins"
                     /note="The PNPOx-like superfamily is composed of
                     pyridoxine 5'-phosphate (PNP) oxidases and other flavin
                     mononucleotide (FMN) binding proteins, which catalyze
                     FMN-mediated redox reactions. Flavin reductases catalyze
                     the reduction of FMN or FAD using NAD(P)H as...; cl00381"
                     /db_xref="CDD:469750"
ORIGIN      
        1 mlltdamrrr lylggrpngl aralnrisaf qfgrallapp dwvtlevvgr rsgnvvalpl
       61 vvtryrgehy lvsmlgdgan wvanvraagg aavlrhgrrr pvrlvevdad qrapilqryl
      121 avapgarphi pvdrraplse fdriaagfpv fritare
//
LOCUS       WP_236046878             209 aa            linear   BCT 02-MAR-2025
DEFINITION  type II secretion system F family protein [Streptacidiphilus
            fuscans].
ACCESSION   WP_236046878
VERSION     WP_236046878.1
KEYWORDS    RefSeq.
SOURCE      Streptacidiphilus fuscans
  ORGANISM  Streptacidiphilus fuscans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptacidiphilus.
REFERENCE   1  (residues 1 to 209)
  AUTHORS   Desvaux,M., Hebraud,M., Talon,R. and Henderson,I.R.
  TITLE     Secretion and subcellular localizations of bacterial proteins: a
            semantic awareness issue
  JOURNAL   Trends Microbiol 17 (4), 139-145 (2009)
   PUBMED   19299134
REFERENCE   2  (residues 1 to 209)
  AUTHORS   Desvaux,M., Parham,N.J., Scott-Tucker,A. and Henderson,I.R.
  TITLE     The general secretory pathway: a general misnomer?
  JOURNAL   Trends Microbiol 12 (7), 306-309 (2004)
   PUBMED   15223057
REFERENCE   3  (residues 1 to 209)
  AUTHORS   Peabody,C.R., Chung,Y.J., Yen,M.R., Vidal-Ingigliardi,D.,
            Pugsley,A.P. and Saier,M.H.
  TITLE     Type II protein secretion and its relationship to bacterial type IV
            pili and archaeal flagella
  JOURNAL   Microbiology (Reading) 149 (Pt 11), 3051-3072 (2003)
   PUBMED   14600218
REFERENCE   4  (residues 1 to 209)
  AUTHORS   Py,B., Loiseau,L. and Barras,F.
  TITLE     An inner membrane platform in the type II secretion machinery of
            Gram-negative bacteria
  JOURNAL   EMBO Rep 2 (3), 244-248 (2001)
   PUBMED   11266368
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012694.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00482.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Streptacidiphilus fuscans"
                     /db_xref="taxon:2789292"
     Protein         1..209
                     /product="type II secretion system F family protein"
                     /calculated_mol_wt=21134
     Region          16..>125
                     /region_name="TadB"
                     /note="Flp pilus assembly protein TadB [Intracellular
                     trafficking, secretion, and vesicular transport,
                     Extracellular structures]; COG4965"
                     /db_xref="CDD:443991"
ORIGIN      
        1 mehhreravp vlasgmvglg aallvggmdg wmlgvvlasa glrwlptppn paqqrqrqea
       61 ialrgqvpla adllagclss wcppdaataa varaipqpma grlaaaatel smgadpeacw
      121 erlgkvepvl aplgrclara aasgappaag larladaera aaareaqarv rragvlatap
      181 lglcflpafv lvgvvpvvtg lagsfltri
//
LOCUS       WP_236046637             116 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6204 family protein [Paractinoplanes ovalisporus].
ACCESSION   WP_236046637
VERSION     WP_236046637.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes ovalisporus
  ORGANISM  Paractinoplanes ovalisporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 116)
  AUTHORS   Weber,T., Laiple,K.J., Pross,E.K., Textor,A., Grond,S., Welzel,K.,
            Pelzer,S., Vente,A. and Wohlleben,W.
  TITLE     Molecular analysis of the kirromycin biosynthetic gene cluster
            revealed beta-alanine as precursor of the pyridone moiety
  JOURNAL   Chem Biol 15 (2), 175-188 (2008)
   PUBMED   18291322
REFERENCE   2  (residues 1 to 116)
  AUTHORS   Wolf,H., Chinali,G. and Parmeggiani,A.
  TITLE     Kirromycin, an inhibitor of protein biosynthesis that acts on
            elongation factor Tu
  JOURNAL   Proc Natl Acad Sci U S A 71 (12), 4910-4914 (1974)
   PUBMED   4373734
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039377.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19707.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Paractinoplanes ovalisporus"
                     /db_xref="taxon:2810368"
     Protein         1..116
                     /product="DUF6204 family protein"
                     /calculated_mol_wt=12728
     Region          2..111
                     /region_name="DUF6204"
                     /note="Family of unknown function (DUF6204); pfam19707"
                     /db_xref="CDD:466154"
ORIGIN      
        1 msravrvtvr gsfdglseaq maslvavage hdfmntqyta egylaydlpg rpfftfrfae
       61 eaadadevpq aavraqikae ewmaergypi knvtvqavdm aevplgkrgr reasrq
//
LOCUS       WP_236047564             496 aa            linear   BCT 02-MAR-2025
DEFINITION  carbohydrate binding domain-containing protein [Streptacidiphilus
            fuscans].
ACCESSION   WP_236047564
VERSION     WP_236047564.1
KEYWORDS    RefSeq.
SOURCE      Streptacidiphilus fuscans
  ORGANISM  Streptacidiphilus fuscans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptacidiphilus.
REFERENCE   1  (residues 1 to 496)
  AUTHORS   Johnson,P.E., Joshi,M.D., Tomme,P., Kilburn,D.G. and McIntosh,L.P.
  TITLE     Structure of the N-terminal cellulose-binding domain of
            Cellulomonas fimi CenC determined by nuclear magnetic resonance
            spectroscopy
  JOURNAL   Biochemistry 35 (45), 14381-14394 (1996)
   PUBMED   8916925
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014116.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02018.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Streptacidiphilus fuscans"
                     /db_xref="taxon:2789292"
     Protein         1..496
                     /product="carbohydrate binding domain-containing protein"
                     /GO_function="GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /calculated_mol_wt=50629
     Region          16..>77
                     /region_name="NTTRR-F1"
                     /note="NTTRR-F1 domain; NF033675"
                     /db_xref="CDD:468135"
     Region          205..492
                     /region_name="GH18_chitinase-like"
                     /note="The GH18 (glycosyl hydrolase, family 18) type II
                     chitinases hydrolyze chitin, an abundant polymer of
                     beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a
                     major component of the cell wall of fungi and the
                     exoskeleton of arthropods. Chitinases have...; cl10447"
                     /db_xref="CDD:471972"
     Site            order(232,310,312,314,378..379,424,456)
                     /site_type="active"
                     /db_xref="CDD:119349"
ORIGIN      
        1 malaggsaqa aatgqllvng gfesgdltgw scsandkvvt spvaqgsyal sgtpagqdda
       61 qcaqmvsvlp nstytlsgev egnyvylgdt gtgttdtsnw tasapswqtl sttfttgast
      121 tsvtvwvhgw ygegtfgada lslvgptpsg ggtgspspst sasasasasa spsasasasa
      181 sasaspssta ttpppvdtgf hhpvyfmpld nspqaisdil anssenqfnl afvldsggct
      241 pawggnasap vssdtavlad vnavraaggd vavsfggyng telgsscgsa salaaayqsv
      301 itkygltrid ldwentalds nmavrwgaik qleaqdpnli vsltipattv glpdtgkdei
      361 qqaindgari drvnlmdfdf glnsgtqtaa aetvasdtaa qletlygwna qtawahlsvq
      421 lmnghtdqps elytqqtftd llgyvqanha aafsywdinr dracdpsvvh nwadgacssv
      481 tqnpydftki itqfng
//
LOCUS       WP_236047711             521 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Streptacidiphilus
            fuscans].
ACCESSION   WP_236047711
VERSION     WP_236047711.1
KEYWORDS    RefSeq.
SOURCE      Streptacidiphilus fuscans
  ORGANISM  Streptacidiphilus fuscans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptacidiphilus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024945.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13556.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Streptacidiphilus fuscans"
                     /db_xref="taxon:2789292"
     Protein         1..521
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=55534
     Region          <306..372
                     /region_name="CdaR"
                     /note="Sugar diacid utilization regulator CdaR
                     [Transcription, Signal transduction mechanisms]; COG3835"
                     /db_xref="CDD:443046"
     Region          <407..497
                     /region_name="PucR"
                     /note="DNA-binding transcriptional regulator, PucR/PutR
                     family [Transcription]; COG2508"
                     /db_xref="CDD:441998"
ORIGIN      
        1 mhgepaadav algrirradd vlemqraark ggtepvlrwl arrtgakvll mtsagtpahq
       61 pqgplsdaer rlaqrgsrel aaerrrgsva idqdgltciv lpldgsrgaa apflaavapr
      121 ptppelplll adatsvlsls wlaehvgrqq rrltvaeagt reavmhllln ghtsaarqva
      181 galgpalpat vrvyviegpp qarsqlaeel gevtdddvwi vqcpvyvdhl fmlepgdsap
      241 mrvwpprlas tcwigesnav plretatgya qafhalaaar aglerqasfa anpdlalavg
      301 ptaavwsatf laplyahrpg rpqdpdstel lataaswlsf rssatahlki hrntlsarlt
      361 liqellglnl hrladqaala lalrtaaatk alappedgaa eaasptldel llqprvrawa
      421 qeqlrpvtap dvpecvgetl atwlrldari gstatalsvs msavrkrltr seallqrsll
      481 rspsavhdlw lalraldqcs gsvdrlwage ylpgdavmvp e
//
LOCUS       WP_236047773             240 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Streptacidiphilus fuscans].
ACCESSION   WP_236047773
VERSION     WP_236047773.1
KEYWORDS    RefSeq.
SOURCE      Streptacidiphilus fuscans
  ORGANISM  Streptacidiphilus fuscans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptacidiphilus.
REFERENCE   1  (residues 1 to 240)
  AUTHORS   Vertes,A.A., Inui,M., Kobayashi,M., Kurusu,Y. and Yukawa,H.
  TITLE     Isolation and characterization of IS31831, a transposable element
            from Corynebacterium glutamicum
  JOURNAL   Mol Microbiol 11 (4), 739-746 (1994)
   PUBMED   8196545
REFERENCE   2  (residues 1 to 240)
  AUTHORS   van der Zee,A., Agterberg,C., van Agterveld,M., Peeters,M. and
            Mooi,F.R.
  TITLE     Characterization of IS1001, an insertion sequence element of
            Bordetella parapertussis
  JOURNAL   J Bacteriol 175 (1), 141-147 (1993)
   PUBMED   8093238
REFERENCE   3  (residues 1 to 240)
  AUTHORS   Johansen,E. and Kibenich,A.
  TITLE     Isolation and characterization of IS1165, an insertion sequence of
            Leuconostoc mesenteroides subsp. cremoris and other lactic acid
            bacteria
  JOURNAL   Plasmid 27 (3), 200-206 (1992)
   PUBMED   1325060
REFERENCE   4  (residues 1 to 240)
  AUTHORS   Cirillo,J.D., Barletta,R.G., Bloom,B.R. and Jacobs,W.R. Jr.
  TITLE     A novel transposon trap for mycobacteria: isolation and
            characterization of IS1096
  JOURNAL   J Bacteriol 173 (24), 7772-7780 (1991)
   PUBMED   1660454
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013753.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01610.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Streptacidiphilus fuscans"
                     /db_xref="taxon:2789292"
     Protein         1..240
                     /product="transposase"
                     /calculated_mol_wt=26363
     Region          <84..238
                     /region_name="COG3464"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442687"
ORIGIN      
        1 mqlgdvvaal apalvqvgle rvdrcpthcl dqqrvqaaga geapdgrvvq tklaaaagqr
       61 qslrqellhr lvalggagdq psgateavqt vrrylrnftp tapvpaprpa prprrvvrwi
      121 mtnpsnlpde dtlslkeira gcpeldevtd hvrdfaemmr dlrgdqlpqw mervehdplp
      181 alhslinglr rdqdavvagl sspwssgqve gqntrvkllk ragygranfd llrkrilhrt
//
LOCUS       WP_236048108             745 aa            linear   BCT 02-MAR-2025
DEFINITION  family 78 glycoside hydrolase catalytic domain [Paractinoplanes
            ovalisporus].
ACCESSION   WP_236048108
VERSION     WP_236048108.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes ovalisporus
  ORGANISM  Paractinoplanes ovalisporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 745)
  AUTHORS   Zverlov,V.V., Hertel,C., Bronnenmeier,K., Hroch,A., Kellermann,J.
            and Schwarz,W.H.
  TITLE     The thermostable alpha-L-rhamnosidase RamA of Clostridium
            stercorarium: biochemical characterization and primary structure of
            a bacterial alpha-L-rhamnoside hydrolase, a new type of inverting
            glycoside hydrolase
  JOURNAL   Mol Microbiol 35 (1), 173-179 (2000)
   PUBMED   10632887
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017410.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05592.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Paractinoplanes ovalisporus"
                     /db_xref="taxon:2810368"
     Protein         1..745
                     /product="family 78 glycoside hydrolase catalytic domain"
                     /calculated_mol_wt=81106
     Region          24..194
                     /region_name="Bac_rhamnosid_N"
                     /note="Alpha-L-rhamnosidase N-terminal domain; pfam08531"
                     /db_xref="CDD:400715"
     Region          202..301
                     /region_name="Bac_rhamnosid"
                     /note="Bacterial alpha-L-rhamnosidase concanavalin-like
                     domain; pfam05592"
                     /db_xref="CDD:336149"
     Region          305..659
                     /region_name="Bac_rhamnosid6H"
                     /note="Bacterial alpha-L-rhamnosidase 6 hairpin
                     glycosidase domain; pfam17389"
                     /db_xref="CDD:407469"
     Region          661..739
                     /region_name="Bac_rhamnosid_C"
                     /note="Bacterial alpha-L-rhamnosidase C-terminal domain;
                     pfam17390"
                     /db_xref="CDD:379972"
ORIGIN      
        1 mittdevdqa pllrtrftld dghgevtsav lhvsalgvve phldgepvse dvltpgwssy
       61 ewrlryvshd vtarlgrgeh vlglalgngw argrlgwndg rafytgelga faqleitfad
      121 ghrqvvatgp dwqarpsavl addlydgqti darlreprwa aadgpetgwt gvhalefdar
      181 rltehigppv rrhevlrpvq vtrspsgktl vdfgqnlvgw lrftvrgeag tvitvrhaev
      241 lendelgtrp lrsaratdrf vlsggldtfe ptltfhgfry aevsgwpgel grddleavvv
      301 hsamrrtgef dcsnelvnql hrnvvwgqkg nfldvptdcp qrderlgwtg dlavfgptaa
      361 ylfdvssflr dwlrdlaaeq ahspdiaplv vpdmvkfeen ddviqarsva vwsdvavwlp
      421 wslwlaygdr dalaeaypaa sehvrraetl lspnglwdtg fqygdwldpd apedkasaak
      481 adkgvvataa lyrsartaad marllghaed aeafasladr lrtafgkhyv sadgivfsdc
      541 atvyalaief glldgdlrdr agarlaelva asgyrvstgf agtpyvtgal tstghldaay
      601 rllleescps wlypvtmgat tiwerwdsil pdgrvnpgdm tsfnhyalga vadwlhrvva
      661 glsplepgya rsliaprpgg gitwahgsle tpygklavdw rnepggfead vtvppgttal
      721 lrlpdgtehe ldagehtvra atvgq
//
LOCUS       WP_236048276             437 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein
            [Paractinoplanes ovalisporus].
ACCESSION   WP_236048276
VERSION     WP_236048276.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes ovalisporus
  ORGANISM  Paractinoplanes ovalisporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Paractinoplanes ovalisporus"
                     /db_xref="taxon:2810368"
     Protein         1..437
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=46124
     Region          36..>427
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
ORIGIN      
        1 mqillrllrp hlpvlilglv lglisnaanl aaplatkrii dtlgtgdala gpitlllvlv
       61 vigaviglwq wilmgtlaeq vvldarlsvi qryfrarlae ltgrptgelv trvtadpgll
      121 hqasssivgl inaslafiat lvlmgtldvv lllctlaava ivgavmavll ptiskaqkaa
      181 qdavgdlgge legtlramrt vkasraedrq ggrieadarr aaahnvraar raawvwtvsw
      241 sgvslaviav lgvgawrada gllevsslia fllyafqlmg pigeltqnvt alqsgiaaar
      301 risevyames etstptpgsr vpdapvlavr nvtlryteeg paalddvslt ipsrghtavv
      361 gpsgagktsl fslllrfldp gsgeitlhgr pyrslthsei rgelayveqe apvvpgtire
      421 nilfshprpp tanwrrc
//
LOCUS       WP_417281886             567 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase [Alicyclobacillus fodiniaquatilis].
ACCESSION   WP_417281886
VERSION     WP_417281886.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus fodiniaquatilis
  ORGANISM  Alicyclobacillus fodiniaquatilis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 567)
  AUTHORS   Gustafson,E.A. and Wessel,G.M.
  TITLE     DEAD-box helicases: posttranslational regulation and function
  JOURNAL   Biochem Biophys Res Commun 395 (1), 1-6 (2010)
   PUBMED   20206133
REFERENCE   2  (residues 1 to 567)
  AUTHORS   Jankowsky,E. and Putnam,A.
  TITLE     Duplex unwinding with DEAD-box proteins
  JOURNAL   Methods Mol Biol 587, 245-264 (2010)
   PUBMED   20225155
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11425670
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Alicyclobacillus fodiniaquatilis"
                     /db_xref="taxon:1661150"
     Protein         1..567
                     /product="DEAD/DEAH box helicase"
                     /EC_number="3.6.4.-"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0004386 - helicase activity [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=64886
     Region          <68..513
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
ORIGIN      
        1 mlavpdiaws geeipaaies fvvesankqt dvdsrqwdlf rlaataaqsr maptfesllv
       61 mdhihgftpl phqietakrv lqelrgrail adevglgkti eaglilkeyl lrglvrkali
      121 lvpaslvlqw trelnekfri qatpqrnvwt weqyelvvas ldtakrephr eavlaqpwdl
      181 vivdeahklk nqrtknwqmv nqipnkylll ltatpmqnql kelhtlvtll kpghlgsmse
      241 fsskhmatrr tprdadrlre tmgdvmirnr rkdggttlpp rsvqvvslel sdaervfyee
      301 vqtllkkeyd lrkstrssml plltlqreic sspyaalisl ekmqkkasse qakihlseli
      361 elgsqissyt kvnkvielvq qiddkciift eyratqdfil yllkkngisa vpfrggfkrg
      421 kkdwmkdlfe kkvkilvate sggeginlqf cshminfdlp wnpmrleqri grihrlgqtk
      481 nchihnlatk ntieehival lhekirmfem vigeldyivs eqqfadwekn lfevamtskn
      541 ktdlaarieq igeawrpsdq kargvdk
//
LOCUS       WP_236048365             383 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Paractinoplanes ovalisporus].
ACCESSION   WP_236048365
VERSION     WP_236048365.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes ovalisporus
  ORGANISM  Paractinoplanes ovalisporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 383)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 383)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Paractinoplanes ovalisporus"
                     /db_xref="taxon:2810368"
     Protein         1..383
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=41698
     Region          1..138
                     /region_name="COG4329"
                     /note="Uncharacterized membrane protein, DUF2243 domain
                     [Function unknown]"
                     /db_xref="CDD:443470"
     Region          300..383
                     /region_name="COG3393"
                     /note="Predicted acetyltransferase, GNAT family [General
                     function prediction only]"
                     /db_xref="CDD:442620"
ORIGIN      
        1 msavpveqra fsatgrnvls gvllglgiaa fldeavfhql lhwhhfydks tpamglisdg
       61 lfhafswfat iaglflladl rrrvayhaav wwggvlvglg gfqlydgtiq hklmglhqir
      121 ydvdltpydw awnivavass vaparrhqtv sfpvhdcdtt vlddpvglsl rgphrhlarw
      181 vgqavtyeae vasfasvpld psaadwndla rllgtgqlad lfsapvtppr nwtpvfaldg
      241 vqmisdgret tstttvevaq lghadvpdml altaetrpgp fwprtvelga fygvrdsgsl
      301 vamagerlrp sgwteissvc tagthrgrgl aaqvvhaaan ritacgkrpf lhvaannhda
      361 irlyerlgft vrrqvrfhgy qvp
//
LOCUS       WP_236048428             382 aa            linear   BCT 02-MAR-2025
DEFINITION  3-deoxy-7-phosphoheptulonate synthase [Paractinoplanes
            ovalisporus].
ACCESSION   WP_236048428
VERSION     WP_236048428.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes ovalisporus
  ORGANISM  Paractinoplanes ovalisporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013628.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01474.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Paractinoplanes ovalisporus"
                     /db_xref="taxon:2810368"
     Protein         1..382
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /EC_number="2.5.1.54"
                     /GO_function="GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA]"
                     /GO_process="GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /calculated_mol_wt=40846
     Region          11..377
                     /region_name="DAHP_synth_2"
                     /note="Class-II DAHP synthetase family; cl03230"
                     /db_xref="CDD:470763"
ORIGIN      
        1 msavaelhqr wemlpareqp dwrdhpelsr iraelrsrep lvteseiaaa ragiakvaag
       61 ealllqagdc aesfaesgpe htaakvaalt glsdllslst grpvmrfarm agqyakprss
      121 ptemvggvem ptfrghivna peadpaaraa dperlllaya hssrvlaamp dgpwvsheal
      181 lldyegpqvr pgatgdllla sthlpwiger trqadhahva mlaavanpva ckvgptaspe
      241 svvdlcarld pdrrpgrltl iarmgagrva ealppiarav rqaghpvvwl sdpmhgntvr
      301 aksgektrhl dsmiaeavlf rvslerlglh pgglhlevaa advtecvggn vpgedalrrr
      361 yeslcdprln psqarelits vf
//
LOCUS       WP_236048485             121 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Paractinoplanes
            ovalisporus].
ACCESSION   WP_236048485
VERSION     WP_236048485.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes ovalisporus
  ORGANISM  Paractinoplanes ovalisporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Paractinoplanes ovalisporus"
                     /db_xref="taxon:2810368"
     Protein         1..121
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=12942
     Region          9..>105
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(9..11,25,41..43)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133385"
ORIGIN      
        1 mtttmftrsv sdvaaesgva psavrfyeqh gvitairtag dqrrfdesaa crirvakvaq
       61 rvgltvreia difaalpadp qpadwgrvat tliaeaesrt aalksylndm rgsgrlceid
      121 v
//
LOCUS       WP_236048567             152 aa            linear   BCT 02-MAR-2025
DEFINITION  nitroreductase/quinone reductase family protein [Paractinoplanes
            ovalisporus].
ACCESSION   WP_236048567
VERSION     WP_236048567.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes ovalisporus
  ORGANISM  Paractinoplanes ovalisporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 152)
  AUTHORS   Gurumurthy,M., Rao,M., Mukherjee,T., Rao,S.P., Boshoff,H.I.,
            Dick,T., Barry,C.E. 3rd and Manjunatha,U.H.
  TITLE     A novel F(420) -dependent anti-oxidant mechanism protects
            Mycobacterium tuberculosis against oxidative stress and
            bactericidal agents
  JOURNAL   Mol Microbiol 87 (4), 744-755 (2013)
   PUBMED   23240649
REFERENCE   2  (residues 1 to 152)
  AUTHORS   Singh,R., Manjunatha,U., Boshoff,H.I., Ha,Y.H., Niyomrattanakit,P.,
            Ledwidge,R., Dowd,C.S., Lee,I.Y., Kim,P., Zhang,L., Kang,S.,
            Keller,T.H., Jiricek,J. and Barry,C.E. 3rd.
  TITLE     PA-824 kills nonreplicating Mycobacterium tuberculosis by
            intracellular NO release
  JOURNAL   Science 322 (5906), 1392-1395 (2008)
   PUBMED   19039139
REFERENCE   3  (residues 1 to 152)
  AUTHORS   Manjunatha,U.H., Boshoff,H., Dowd,C.S., Zhang,L., Albert,T.J.,
            Norton,J.E., Daniels,L., Dick,T., Pang,S.S. and Barry,C.E. 3rd.
  TITLE     Identification of a nitroimidazo-oxazine-specific protein involved
            in PA-824 resistance in Mycobacterium tuberculosis
  JOURNAL   Proc Natl Acad Sci U S A 103 (2), 431-436 (2006)
   PUBMED   16387854
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016001.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04075.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Paractinoplanes ovalisporus"
                     /db_xref="taxon:2810368"
     Protein         1..152
                     /product="nitroreductase/quinone reductase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=16888
     Region          36..147
                     /region_name="Pyridoxine 5'-phosphate (PNP) oxidase-like
                     and flavin reductase-like proteins"
                     /note="The PNPOx-like superfamily is composed of
                     pyridoxine 5'-phosphate (PNP) oxidases and other flavin
                     mononucleotide (FMN) binding proteins, which catalyze
                     FMN-mediated redox reactions. Flavin reductases catalyze
                     the reduction of FMN or FAD using NAD(P)H as...; cl00381"
                     /db_xref="CDD:469750"
ORIGIN      
        1 mtfdskrgty garqpkgwfl rlgnkimsgr vrknarmmgf nvlvlhtvgr rsgverthpv
       61 gwfaepgggr livasangaa dnpawyynla ahpdvrievg grteevtaeq lhgddreraw
      121 qlilkeaprf aqyatktdre mpiirltgsr gl
//
LOCUS       WP_236048576             183 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5987 family protein [Paractinoplanes ovalisporus].
ACCESSION   WP_236048576
VERSION     WP_236048576.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes ovalisporus
  ORGANISM  Paractinoplanes ovalisporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039951.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19449.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Paractinoplanes ovalisporus"
                     /db_xref="taxon:2810368"
     Protein         1..183
                     /product="DUF5987 family protein"
                     /calculated_mol_wt=18998
     Region          7..182
                     /region_name="DUF5987"
                     /note="Family of unknown function (DUF5987); pfam19449"
                     /db_xref="CDD:437281"
ORIGIN      
        1 mtsrtatmtl eafadtvipg ckrfpddpai cgvsddpgav eagaltvlad palglteald
       61 gmagllnmha gayqrrtgaa vdpalpafva lafddrtalv qeltdpahae rdvwfgaalf
      121 ctmafdcaph khtveamaeg hpglrllgya ppgadgqwgf ehfsygrala pphpdttpsg
      181 spr
//
LOCUS       WP_236048704             493 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase [Paractinoplanes ovalisporus].
ACCESSION   WP_236048704
VERSION     WP_236048704.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes ovalisporus
  ORGANISM  Paractinoplanes ovalisporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 493)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 493)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Paractinoplanes ovalisporus"
                     /db_xref="taxon:2810368"
     Protein         1..493
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=51900
     Region          4..437
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mvtlvagids stqsckvevr elhtgrlire graphppqki vdpeewwqal llavqraggl
       61 hdvsalsvsg qqhtpvfldq ngavvrdspl wndtgshpqv valnselgsg ewvrrtglpi
      121 tlsdtvvklr wlrdtdpest rrtaavavvh dwltwrlmgf gpgradfsrl vtdrseasgt
      181 gywsgetgdy ctdlvqhalg knvilprllg pldragvtsp gipgipagvv igagsgdnaa
      241 aalalqlrvg davmslgtsg vvysrsaqpv hdysrvicsy adatgdhlpl gatlnaardl
      301 dagiavlgcd ydelsalalq aapgaggltl lpyfegertp dlpeataslh gatlanftrp
      361 nfaraviegm lasqvvmiea iracdvpvnr llliggaars pavqqvltei idvplllpep
      421 geyvtigaav qaggalsghf pdwhpvvrev praetsslim sqhraarkal aydpappmaa
      481 vspldrlrna aas
//
LOCUS       WP_236048706             145 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Paractinoplanes ovalisporus].
ACCESSION   WP_236048706
VERSION     WP_236048706.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes ovalisporus
  ORGANISM  Paractinoplanes ovalisporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024635.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13238.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Paractinoplanes ovalisporus"
                     /db_xref="taxon:2810368"
     Protein         1..145
                     /product="AAA family ATPase"
                     /calculated_mol_wt=15968
     Region          4..103
                     /region_name="AAA_18"
                     /note="AAA domain; pfam13238"
                     /db_xref="CDD:433052"
     Region          <73..142
                     /region_name="PRK14532"
                     /note="adenylate kinase; Provisional"
                     /db_xref="CDD:184729"
ORIGIN      
        1 marvlvtgms gtgkttvlre lggrglltvd tdydgwtrdd grwdeprmte llasndgvvv
       61 sgtvenqghf ydrfdhvvll sapievllqr varranpygr tpeqraeite yvrtvepllr
      121 qgatleldgc rptseladvi ealar
//
LOCUS       WP_236048747             316 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Marinilactibacillus
            psychrotolerans].
ACCESSION   WP_236048747
VERSION     WP_236048747.1
KEYWORDS    RefSeq.
SOURCE      Marinilactibacillus psychrotolerans
  ORGANISM  Marinilactibacillus psychrotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Marinilactibacillus.
REFERENCE   1  (residues 1 to 316)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 316)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 316)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Marinilactibacillus psychrotolerans"
                     /db_xref="taxon:191770"
     Protein         1..316
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=35286
     Region          50..296
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(132..133,136,159)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238558"
ORIGIN      
        1 mkkiwsssil lmlglmlagc gneqsnsget aekktsnnte peimtdnlgn eveipdnpek
       61 vlasyledyl valdvtpvaq wsiydgesiq eylqadlegi pliphdlpye svleyepdli
      121 virdpieqdm ydqyaqiapt yvlnssptew ratleeigev lgkeekaqsv lesykekake
      181 kaeelaevvk gesaaaiwmv nnslfvvhpe rssgavlyed lgleipevvs elssdadwaa
      241 isleelakmn vdhlffinsd gpnaemledr lwqnipavqn eqvyefgpet swlyygpias
      301 eqvmdnvves itnrvq
//
LOCUS       WP_236048846             238 aa            linear   BCT 02-MAR-2025
DEFINITION  lytic polysaccharide monooxygenase [Paractinoplanes ovalisporus].
ACCESSION   WP_236048846
VERSION     WP_236048846.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes ovalisporus
  ORGANISM  Paractinoplanes ovalisporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 238)
  AUTHORS   Forsberg,Z., Mackenzie,A.K., Sorlie,M., Rohr,A.K., Helland,R.,
            Arvai,A.S., Vaaje-Kolstad,G. and Eijsink,V.G.
  TITLE     Structural and functional characterization of a conserved pair of
            bacterial cellulose-oxidizing lytic polysaccharide monooxygenases
  JOURNAL   Proc Natl Acad Sci U S A 111 (23), 8446-8451 (2014)
   PUBMED   24912171
REFERENCE   2  (residues 1 to 238)
  AUTHORS   Schnellmann,J., Zeltins,A., Blaak,H. and Schrempf,H.
  TITLE     The novel lectin-like protein CHB1 is encoded by a chitin-inducible
            Streptomyces olivaceoviridis gene and binds specifically to
            crystalline alpha-chitin of fungi and other organisms
  JOURNAL   Mol Microbiol 13 (5), 807-819 (1994)
   PUBMED   7815940
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015054.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03067.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Paractinoplanes ovalisporus"
                     /db_xref="taxon:2810368"
     Protein         1..238
                     /product="lytic polysaccharide monooxygenase"
                     /calculated_mol_wt=25038
     Region          32..169
                     /region_name="LPMO_AA10"
                     /note="lytic polysaccharide monooxygenase (LPMO) auxiliary
                     activity family 10 (AA10); cd21177"
                     /db_xref="CDD:410624"
     Region          191..234
                     /region_name="ChiC_BD"
                     /note="Chitin-binding domain of chitinase C; cd12215"
                     /db_xref="CDD:213178"
ORIGIN      
        1 mslkrrlaal aaavliaplv aviapaspas ahgwitspps rqdqcatgav sncgsiqyep
       61 qsveapkgsm scsggssftv lnddnkgwrv tsigsstaft wrntamhrtq nwqyyvdgrl
      121 hqtftngnaq ppqvlshqlt glpggrhkil avwnildtgm afyscvdvnv sgggttpptt
      181 pptnpptscg aawsasavyt ggmnvshkgr aytarwwtqg eepgttgewg awqdkgtc
//
LOCUS       WP_236048891             533 aa            linear   BCT 02-MAR-2025
DEFINITION  PTS transporter subunit EIIC [Marinilactibacillus psychrotolerans].
ACCESSION   WP_236048891
VERSION     WP_236048891.1
KEYWORDS    RefSeq.
SOURCE      Marinilactibacillus psychrotolerans
  ORGANISM  Marinilactibacillus psychrotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Marinilactibacillus.
REFERENCE   1  (residues 1 to 533)
  AUTHORS   Reizer,J., Paulsen,I.T., Reizer,A., Titgemeyer,F. and Saier,M.H.
            Jr.
  TITLE     Novel phosphotransferase system genes revealed by bacterial genome
            analysis: the complete complement of pts genes in mycoplasma
            genitalium
  JOURNAL   Microb Comp Genomics 1 (3), 151-164 (1996)
   PUBMED   9689210
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02378.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Marinilactibacillus psychrotolerans"
                     /db_xref="taxon:191770"
     Protein         1..533
                     /product="PTS transporter subunit EIIC"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /calculated_mol_wt=57338
     Region          4..524
                     /region_name="PRK10110"
                     /note="PTS maltose transporter subunit IICB"
                     /db_xref="CDD:182245"
ORIGIN      
        1 mskdfwqrlg kalmtpisli aaagiflgis svlqnpdivg etfvsftvvq hfigivrala
       61 gaifgnlpil favaisfgla kkdkttaafs gvigfilfhi tiqyllsvnd itaatysvea
      121 lidsgmnela atqaasqyes vlgiftlrmn vfggiitgll vsflhnrfht idlptaisff
      181 ggkrfvpiit tvtvpflall myfvwpyfga aiegvgnlia eagligtflf gflerllvpt
      241 glhhilnqiv rftpiggiae idgeqvvgal nifntslaqd spdmgvmaea trflaqgkip
      301 fmvfglpaaa famvktalke kkqevkglms asglasfttg itepiefsfi fvspilyifh
      361 afmaglsfml mdafgvvign vqggvidltv fgilqgtatn wywavivglf yapiyyfvfk
      421 tviekrhvlt pgreleddev tnesvnssdp sgdlgstivn alggsqniks idncftrlrl
      481 vlgdtsivde dalkktgaag tlkldetnyq viygpkveki apqvkgaahy hde
//
LOCUS       WP_236049060             387 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Paractinoplanes ovalisporus].
ACCESSION   WP_236049060
VERSION     WP_236049060.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes ovalisporus
  ORGANISM  Paractinoplanes ovalisporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 387)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Paractinoplanes ovalisporus"
                     /db_xref="taxon:2810368"
     Protein         1..387
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=41516
     Region          13..251
                     /region_name="RpfG"
                     /note="Response regulator c-di-GMP phosphodiesterase, RpfG
                     family, contains REC and HD-GYP domains [Signal
                     transduction mechanisms]; COG3437"
                     /db_xref="CDD:442663"
     Region          15..132
                     /region_name="REC_HupR-like"
                     /note="phosphoacceptor receiver (REC) domain of hydrogen
                     uptake protein regulator (HupR) and similar domains;
                     cd17569"
                     /db_xref="CDD:381113"
     Site            order(98,102,105..106,109,111..113)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381113"
ORIGIN      
        1 mtnvlapapg aatrptvllv ddesailetl slqlrrdhkv lvagsgaeal rllassgpva
       61 avisdlrmpe mdgvellrrv qleypdttrv lhtaqsdlsa aiaaindggv yrylskpvtt
      121 delrttvqsa vemhgrstad rqlldktlka slhalfgcle lasplafara grirtlvsel
      181 chemqldslw eievaamasq lgavtlppsv lvkldkglpc tdeeqamvda mpgvavqllk
      241 tipmledvie ivrglslnpp phpsplveaa iavvrtaidf etlesrglev esaitvlecr
      301 dhsallvlaa lrqvkgcvqv kekvrglrvv dlevgmrvae divaanglvl igrgmvvtdl
      361 lldrltnfar mieiiepvla vpgarrf
//
LOCUS       WP_236049218             200 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Paractinoplanes ovalisporus].
ACCESSION   WP_236049218
VERSION     WP_236049218.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes ovalisporus
  ORGANISM  Paractinoplanes ovalisporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 200)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 200)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Paractinoplanes ovalisporus"
                     /db_xref="taxon:2810368"
     Protein         1..200
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=23126
ORIGIN      
        1 msatsgptwr rpagepsmli kvidritdqa lhetmwtmyr dafeelnhla vqrhlmfrpe
       61 fdavmedprv dkylaldddg ticgvatytn dldavpliap qyferhwpdq yaarkiwyig
      121 fvavspeaqg reafaqlveq mymvasaqng lvcldicnhn devrrmsrvf rmmvsrlsdn
      181 mkftridqqs ywlyefptaa
//
LOCUS       WP_236049762             347 aa            linear   BCT 02-MAR-2025
DEFINITION  GntR family transcriptional regulator [Hymenobacter negativus].
ACCESSION   WP_236049762
VERSION     WP_236049762.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter negativus
  ORGANISM  Hymenobacter negativus
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 347)
  AUTHORS   Hillerich,B. and Westpheling,J.
  TITLE     A new GntR family transcriptional regulator in streptomyces
            coelicolor is required for morphogenesis and antibiotic production
            and controls transcription of an ABC transporter in response to
            carbon source
  JOURNAL   J Bacteriol 188 (21), 7477-7487 (2006)
   PUBMED   16936034
REFERENCE   2  (residues 1 to 347)
  AUTHORS   Rigali,S., Nothaft,H., Noens,E.E., Schlicht,M., Colson,S.,
            Muller,M., Joris,B., Koerten,H.K., Hopwood,D.A., Titgemeyer,F. and
            van Wezel,G.P.
  TITLE     The sugar phosphotransferase system of Streptomyces coelicolor is
            regulated by the GntR-family regulator DasR and links
            N-acetylglucosamine metabolism to the control of development
  JOURNAL   Mol Microbiol 61 (5), 1237-1251 (2006)
   PUBMED   16925557
REFERENCE   3  (residues 1 to 347)
  AUTHORS   Gorelik,M., Lunin,V.V., Skarina,T. and Savchenko,A.
  TITLE     Structural characterization of GntR/HutC family signaling domain
  JOURNAL   Protein Sci 15 (6), 1506-1511 (2006)
   PUBMED   16672238
REFERENCE   4  (residues 1 to 347)
  AUTHORS   Rigali,S., Schlicht,M., Hoskisson,P., Nothaft,H., Merzbacher,M.,
            Joris,B. and Titgemeyer,F.
  TITLE     Extending the classification of bacterial transcription factors
            beyond the helix-turn-helix motif as an alternative approach to
            discover new cis/trans relationships
  JOURNAL   Nucleic Acids Res 32 (11), 3418-3426 (2004)
   PUBMED   15247334
  REMARK    Publication Status: Online-Only
REFERENCE   5  (residues 1 to 347)
  AUTHORS   Lee,M.H., Scherer,M., Rigali,S. and Golden,J.W.
  TITLE     PlmA, a new member of the GntR family, has plasmid maintenance
            functions in Anabaena sp. strain PCC 7120
  JOURNAL   J Bacteriol 185 (15), 4315-4325 (2003)
   PUBMED   12867439
REFERENCE   6  (residues 1 to 347)
  AUTHORS   Rigali,S., Derouaux,A., Giannotta,F. and Dusart,J.
  TITLE     Subdivision of the helix-turn-helix GntR family of bacterial
            regulators in the FadR, HutC, MocR, and YtrA subfamilies
  JOURNAL   J Biol Chem 277 (15), 12507-12515 (2002)
   PUBMED   11756427
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012610.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00392.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Hymenobacter negativus"
                     /db_xref="taxon:2795026"
     Protein         1..347
                     /product="GntR family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=39821
     Region          15..>97
                     /region_name="YhcF"
                     /note="DNA-binding transcriptional regulator YhcF, GntR
                     family [Transcription]; COG1725"
                     /db_xref="CDD:441331"
     Region          23..>218
                     /region_name="PRK11402"
                     /note="transcriptional regulator PhoB"
                     /db_xref="CDD:183118"
     Region          <275..330
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mkshdlpttp gmyqlqlkpl dktpkykqiv qsvimdierg vlkngdhlps iselsvehyl
       61 ardtvekayr elrergfits vqgkgyyvqa sdtsklkill vfnklssykk iiyyafletl
      121 gdratvdlqi hhynvnlfqe iieknlgkyn yyvvmphfal nsdkvqsrav lntipsqelv
      181 lldkdipelt hdclrvfqdf dkdifnales sedllekysr lvlvlpsdan hpeelpwgfr
      241 sfclmrnkef svvenamnev vqagtayvvi retdlvelvk kirqtsyllg revgiisfne
      301 tplkellnmt vittdfeamg ktaatlllek qrvkvknpfy tirrgsl
//
LOCUS       WP_236049846             464 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Hymenobacter negativus].
ACCESSION   WP_236049846
VERSION     WP_236049846.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter negativus
  ORGANISM  Hymenobacter negativus
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 464)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 464)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 464)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 464)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Hymenobacter negativus"
                     /db_xref="taxon:2795026"
     Protein         1..464
                     /product="ATP-binding protein"
                     /calculated_mol_wt=51480
     Region          <24..>102
                     /region_name="7TMR-DISM_7TM"
                     /note="7TM diverse intracellular signalling; pfam07695"
                     /db_xref="CDD:429600"
     Region          75..460
                     /region_name="COG4191"
                     /note="Signal transduction histidine kinase regulating
                     C4-dicarboxylate transport system [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443345"
ORIGIN      
        1 mahsdgysel fylapmaygi tramskfldv prrnpllekv lrfiwvpavv llgivllfei
       61 ksplvgdfyw lfalltilgt lvalrhyrpa rtllfatapf vlyklvemvl edgsgempkr
      121 fdafmdstqg fvmiwvitfm fisrsqkkql ekeellreee akakrlieaq nmqlehlvae
      181 rtvaltnqaq elqatltelr ttqaqlvqse kmaslgelta giaheiqnpl nfvnnfadvs
      241 aellteleee qakpdrdlel eaelladlkq nlikisqhgg raasivrgml ehsrtssger
      301 tatnlnalad eylrlayhgl rakdktfnat lnpdfdpslp pvavisqdlg rvllnllnna
      361 fyavrqrqqt geagyaptvs istrnlgkev eirvrdngag ipaavrakif qpffttkptg
      421 egtglglsls ydiitqghgg tlvveseegk gtefvisfpi nqvg
//
LOCUS       WP_236049849             402 aa            linear   BCT 02-MAR-2025
DEFINITION  PA14 domain-containing protein [Hymenobacter negativus].
ACCESSION   WP_236049849
VERSION     WP_236049849.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter negativus
  ORGANISM  Hymenobacter negativus
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 402)
  AUTHORS   Rigden,D.J., Mello,L.V. and Galperin,M.Y.
  TITLE     The PA14 domain, a conserved all-beta domain in bacterial toxins,
            enzymes, adhesins and signaling molecules
  JOURNAL   Trends Biochem Sci 29 (7), 335-339 (2004)
   PUBMED   15236739
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07691.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Hymenobacter negativus"
                     /db_xref="taxon:2795026"
     Protein         1..402
                     /product="PA14 domain-containing protein"
                     /calculated_mol_wt=43677
     Region          39..173
                     /region_name="PA14"
                     /note="PA14 domain; pfam07691"
                     /db_xref="CDD:400161"
     Region          <230..388
                     /region_name="OmpA"
                     /note="Outer membrane protein OmpA and related
                     peptidoglycan-associated (lipo)proteins [Cell
                     wall/membrane/envelope biogenesis]; COG2885"
                     /db_xref="CDD:442131"
ORIGIN      
        1 mlrpvysflt rkcwliipgl laatsgpaea qvqalptgdg ilgeyyngpe fdrlvtrrrd
       61 atlafdwgha ppvpgmpaey fsvrwtgwlv ppasgryllh vtvddgvriw lndnlimnew
      121 rpqpvrtftt svelkagepy klrvdyyqdi idtsmritwe rpdkplkppv sswrnlwgmt
      181 aetpkpepip tgflysrnpr papsasaskp avqppkpapa parvifvppa vatsrpatva
      241 pkpvrrpapl pepatlpggs pavviplpaa aptvlladsg staslsklav ggtvtlpely
      301 feqgkagllp pvrtalnala atlrtrpelr fevqghtdnv gnaelnrqls qqraevvcly
      361 ltahgvgtaq lqpkgyggtq pvadnadptq rprnrrvvlr rl
//
LOCUS       WP_236049965             634 aa            linear   BCT 02-MAR-2025
DEFINITION  RagB/SusD family nutrient uptake outer membrane protein
            [Hymenobacter negativus].
ACCESSION   WP_236049965
VERSION     WP_236049965.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter negativus
  ORGANISM  Hymenobacter negativus
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 634)
  AUTHORS   Goulas,T., Garcia-Ferrer,I., Hutcherson,J.A., Potempa,B.A.,
            Potempa,J., Scott,D.A. and Gomis-Ruth,F.X.
  TITLE     Structure of RagB, a major immunodominant outer-membrane surface
            receptor antigen of Porphyromonas gingivalis
  JOURNAL   Mol Oral Microbiol 31 (6), 472-485 (2016)
   PUBMED   26441291
REFERENCE   2  (residues 1 to 634)
  AUTHORS   Bolam,D.N. and Koropatkin,N.M.
  TITLE     Glycan recognition by the Bacteroidetes Sus-like systems
  JOURNAL   Curr Opin Struct Biol 22 (5), 563-569 (2012)
   PUBMED   22819666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07980.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Hymenobacter negativus"
                     /db_xref="taxon:2795026"
     Protein         1..634
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /calculated_mol_wt=69448
     Region          29..>211
                     /region_name="SusD"
                     /note="starch binding outer membrane protein SusD;
                     cl21747"
                     /db_xref="CDD:451378"
     Region          <473..633
                     /region_name="SusD_RagB"
                     /note="SusD family; pfam07980"
                     /db_xref="CDD:429768"
ORIGIN      
        1 mastscskll deeprsiyep gffqtergvs ggltsmyahl ryiygnayyy natltgtdea
       61 tygrdadenf lamdfsgrat lnannsrada lwttafpnin tasgiiknat avgtispalv
      121 aearffrafd yfmlvqtfgg vpldlgsgel afntnpvrts vrntvpevyt kavfpdllqa
      181 vndlpatprv vggvtktlar lylakaylty awwlenpnni ptypaaqrtd pagrtaqyyy
      241 qqaydiatag idnpglfrlq ptyydvhvgt ndrntemmly adhtesseiy nagsltfgsg
      301 gapdnfagwm mtwnytnlrs atnpdgsgav ssvqreaeqh lgrpwnrmap tvdvventfa
      361 dktndsrydg tfttvyrgnw pkagvtnsvl ynannqpvsp ggailtfldt epatpityps
      421 gtgannvgag vlpgradyvi sprgisrivy pglwklgpyr tdggsglgqp nagstrpfni
      481 akfselyfva aeaavkgatt ksgqsareli nviraragkw rfdnnnntsr vqdnsaamva
      541 atpttitiny ilaersreyy aegyrwfdlv rtqkwnelas tyrisgtnyg dhtpatvtrt
      601 iqpfnylrpi pqtqldrldv sadvkatyqn pgyn
//
LOCUS       WP_236050045             251 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome c biogenesis protein CcsA [Hymenobacter negativus].
ACCESSION   WP_236050045
VERSION     WP_236050045.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter negativus
  ORGANISM  Hymenobacter negativus
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 251)
  AUTHORS   Sawyer,E.B. and Barker,P.D.
  TITLE     Continued surprises in the cytochrome c biogenesis story
  JOURNAL   Protein Cell 3 (6), 405-409 (2012)
   PUBMED   22723177
REFERENCE   2  (residues 1 to 251)
  AUTHORS   Stevens,J.M., Mavridou,D.A., Hamer,R., Kritsiligkou,P.,
            Goddard,A.D. and Ferguson,S.J.
  TITLE     Cytochrome c biogenesis System I
  JOURNAL   FEBS J 278 (22), 4170-4178 (2011)
   PUBMED   21958041
REFERENCE   3  (residues 1 to 251)
  AUTHORS   Sanders,C., Turkarslan,S., Lee,D.W. and Daldal,F.
  TITLE     Cytochrome c biogenesis: the Ccm system
  JOURNAL   Trends Microbiol 18 (6), 266-274 (2010)
   PUBMED   20382024
REFERENCE   4  (residues 1 to 251)
  AUTHORS   Page,M.D., Pearce,D.A., Norris,H.A.C. and Ferguson,S.J.
  TITLE     The Paracoccus denitrificans ccmA, B and C genes: cloning and
            sequencing, and analysis of the potential of their products to form
            a haem or apo- c-type cytochrome transporter
  JOURNAL   Microbiology (Reading) 143 (Pt 2), 563-576 (1997)
   PUBMED   9043133
REFERENCE   5  (residues 1 to 251)
  AUTHORS   Delgado,M.J., Yeoman,K.H., Wu,G., Vargas,C., Davies,A.E.,
            Poole,R.K., Johnston,A.W. and Downie,J.A.
  TITLE     Characterization of the cycHJKL genes involved in cytochrome c
            biogenesis and symbiotic nitrogen fixation in Rhizobium
            leguminosarum
  JOURNAL   J Bacteriol 177 (17), 4927-4934 (1995)
   PUBMED   7665469
REFERENCE   6  (residues 1 to 251)
  AUTHORS   Thony-Meyer,L., Fischer,F., Kunzler,P., Ritz,D. and Hennecke,H.
  TITLE     Escherichia coli genes required for cytochrome c maturation
  JOURNAL   J Bacteriol 177 (15), 4321-4326 (1995)
   PUBMED   7635817
REFERENCE   7  (residues 1 to 251)
  AUTHORS   Bonnard,G. and Grienenberger,J.M.
  TITLE     A gene proposed to encode a transmembrane domain of an ABC
            transporter is expressed in wheat mitochondria
  JOURNAL   Mol Gen Genet 246 (1), 91-99 (1995)
   PUBMED   7529870
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013725.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01578.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Hymenobacter negativus"
                     /db_xref="taxon:2795026"
     gene            1..251
                     /gene="ccsA"
     Protein         1..251
                     /product="cytochrome c biogenesis protein CcsA"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /GO_process="GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /calculated_mol_wt=27423
     Region          38..198
                     /region_name="CcmC"
                     /note="ABC-type transport system involved in cytochrome c
                     biogenesis, permease component [Posttranslational
                     modification, protein turnover, chaperones]; COG0755"
                     /db_xref="CDD:440518"
ORIGIN      
        1 mttaaiigsv sgvamtvagv wggqrlveqr gggaiwkgla vllivgatva gflspvpalp
       61 ivnesirnlf fhvpmwfami mvllvsvwys irylrepssr ldvlahesak tgivlgllgl
      121 atgslwarft wgawwtpdpr lngaavamli ygaylvlrgs fqdeqqrarv saiynifafa
      181 aaipllfvlp rlsgpslhpg qtgnpgfnqy dldntmrkvf ypavigwilf afwvaqvssr
      241 yvflklkhde q
//
LOCUS       WP_236050050              43 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6364 family protein [Hymenobacter negativus].
ACCESSION   WP_236050050
VERSION     WP_236050050.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter negativus
  ORGANISM  Hymenobacter negativus
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039417.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19891.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..43
                     /organism="Hymenobacter negativus"
                     /db_xref="taxon:2795026"
     Protein         1..43
                     /product="DUF6364 family protein"
                     /calculated_mol_wt=4689
     Region          4..>40
                     /region_name="DUF6364"
                     /note="Family of unknown function (DUF6364); pfam19891"
                     /db_xref="CDD:466224"
ORIGIN      
        1 msitlelsde vtpqaeqyar qqgrslaalv eeylrqvvak qva
//
LOCUS       WP_236050101             156 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6130 family protein [Hymenobacter negativus].
ACCESSION   WP_236050101
VERSION     WP_236050101.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter negativus
  ORGANISM  Hymenobacter negativus
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039665.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19625.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Hymenobacter negativus"
                     /db_xref="taxon:2795026"
     Protein         1..156
                     /product="DUF6130 family protein"
                     /calculated_mol_wt=16652
     Region          31..151
                     /region_name="DUF6130"
                     /note="Family of unknown function (DUF6130); pfam19625"
                     /db_xref="CDD:437457"
ORIGIN      
        1 mmahpltyfl llscliagaa lqaaaqpsar dilgapavvp ltsepppkly vdpplpepla
       61 lgrvvvqyrt dnlrivpvyg paaldvspri ghihvtidda pwhwadasge plilngfppg
      121 phrilielad pthhiidrka isfvvpeqkg apvshh
//
LOCUS       WP_236050187             228 aa            linear   BCT 02-MAR-2025
DEFINITION  L-2-amino-thiazoline-4-carboxylic acid hydrolase [Paractinoplanes
            ovalisporus].
ACCESSION   WP_236050187
VERSION     WP_236050187.1
KEYWORDS    RefSeq.
SOURCE      Paractinoplanes ovalisporus
  ORGANISM  Paractinoplanes ovalisporus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Paractinoplanes.
REFERENCE   1  (residues 1 to 228)
  AUTHORS   Tashima,I., Yoshida,T., Asada,Y. and Ohmachi,T.
  TITLE     Purification and characterization of a novel
            L-2-amino-Delta2-thiazoline-4-carboxylic acid hydrolase from
            Pseudomonas sp. strain ON-4a expressed in E. coli
  JOURNAL   Appl Microbiol Biotechnol 72 (3), 499-507 (2006)
   PUBMED   16550379
REFERENCE   2  (residues 1 to 228)
  AUTHORS   Ohmachi,T., Nishino,M., Kawata,M., Edo,N., Funaki,H., Narita,M.,
            Mori,K., Tamura,Y. and Asada,Y.
  TITLE     Identification, cloning, and sequencing of the genes involved in
            the conversion of D,L-2-amino-delta2-thiazoline-4-carboxylic acid
            to L-cysteine in Pseudomonas sp. strain ON-4a
  JOURNAL   Biosci Biotechnol Biochem 66 (5), 1097-1104 (2002)
   PUBMED   12092821
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025559.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14196.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Paractinoplanes ovalisporus"
                     /db_xref="taxon:2810368"
     Protein         1..228
                     /product="L-2-amino-thiazoline-4-carboxylic acid
                     hydrolase"
                     /calculated_mol_wt=25419
     Region          72..209
                     /region_name="ATC_hydrolase"
                     /note="L-2-amino-thiazoline-4-carboxylic acid hydrolase;
                     pfam14196"
                     /db_xref="CDD:464100"
ORIGIN      
        1 malegrwfmg rfaprelleg idlylrreap gerekildti rvrageiatq dadmpvdpqs
       61 egmlaltstv qaayevllpv lggderrtvl flrhvvgeva rrpfevafsa lgrrpepmda
      121 iekacrkeap lygdyyemaf erpgpgnfem rvgrcffldh ftrrgnpglt tvmcawdanw
      181 mravdpavsg lraerttlms qggdacrfrv vatddplaay sdaleela
//
LOCUS       WP_236050482             107 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6510 family protein [Nonomuraea cypriaca].
ACCESSION   WP_236050482
VERSION     WP_236050482.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea cypriaca
  ORGANISM  Nonomuraea cypriaca
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040451.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20120.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Nonomuraea cypriaca"
                     /db_xref="taxon:1187855"
     Protein         1..107
                     /product="DUF6510 family protein"
                     /calculated_mol_wt=10935
     Region          20..102
                     /region_name="DUF6510"
                     /note="Family of unknown function (DUF6510); pfam20120"
                     /db_xref="CDD:437952"
ORIGIN      
        1 mstisngdri ydmaddhigd yidgngaggp fgealgidat ttvltcahcg raslfaethv
       61 ydgaglvvrc pgctsvlarl vrtatdawld lrgalsvrvp laagspr
//
LOCUS       WP_236050687             159 aa            linear   BCT 02-MAR-2025
DEFINITION  prolyl oligopeptidase family serine peptidase [Nonomuraea
            cypriaca].
ACCESSION   WP_236050687
VERSION     WP_236050687.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea cypriaca
  ORGANISM  Nonomuraea cypriaca
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012546.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00326.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Nonomuraea cypriaca"
                     /db_xref="taxon:1187855"
     Protein         1..159
                     /product="prolyl oligopeptidase family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=17426
     Region          <60..144
                     /region_name="PreP"
                     /note="Prolyl endopeptidase PreP, S9A serine peptidase
                     family [Amino acid transport and metabolism]; COG1505"
                     /db_xref="CDD:441114"
ORIGIN      
        1 mldfygyaqa dpefyhrgdd gsgnqlrpae lvdrfrvram nagtdlppgl hvgtagidag
       61 llaggavtqr rdlyraavca apladmarye rfgmdpawrf eygsadvpae ldwllayspy
      121 hhvvpgqtyp scmfvvfehd trvdtctpar wsppcstpp
//
LOCUS       WP_236050741             569 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Nonomuraea cypriaca].
ACCESSION   WP_236050741
VERSION     WP_236050741.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea cypriaca
  ORGANISM  Nonomuraea cypriaca
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
REFERENCE   1  (residues 1 to 569)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 569)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 569)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 569)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Nonomuraea cypriaca"
                     /db_xref="taxon:1187855"
     Protein         1..569
                     /product="ATP-binding protein"
                     /calculated_mol_wt=59843
     Region          10..525
                     /region_name="PRK11086"
                     /note="sensory histidine kinase DcuS; Provisional"
                     /db_xref="CDD:236839"
ORIGIN      
        1 mdalaslrir lrvrdaslgt qlfvlqmviv llavggtggv waghtrnqld slhqqralai
       61 aqsvaglpqv rdafelanpe tvlqplamsv qqetgadyvv iandrqkrya hpnatligkq
      121 lstdgttvlr tgrswvgtet gtigttvrgk apirdeygtv iglvsvgvlq ttvtgqlgaa
      181 lpplvwtala vllaglalaa litarvrrqt fglepreiaa lleqregvlh gvkegvlald
      241 lagrvtlvnd aarelledvs vgagedlsrm avsermrdvl ggadpgedrv vlhgervlvl
      301 nrtpvsvrgq hrgwvvtlrd rtelvrlare lddtssatea lraqahefan rmhtvvglle
      361 lgehdaaisf itrttrgtya tdlrervqdp tlaalllaks aeaaergael vlsedsavpe
      421 gligdpqdav lvvgnlvana idaldgaegt ievsvqadag glrvrvgdsg pgiapdlvde
      481 vfregfttka ahsgprglgl altrqaclrr ggwvrvrnsg gavftallpa kapglrgsav
      541 awrsggseat ragegggvrr pspphgvrp
//
LOCUS       WP_236050886            1000 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Nonomuraea cypriaca].
ACCESSION   WP_236050886
VERSION     WP_236050886.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea cypriaca
  ORGANISM  Nonomuraea cypriaca
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
REFERENCE   1  (residues 1 to 1000)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Nonomuraea cypriaca"
                     /db_xref="taxon:1187855"
     Protein         1..1000
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=103666
     Region          47..387
                     /region_name="DAP2"
                     /note="Dipeptidyl aminopeptidase/acylaminoacyl peptidase
                     [Amino acid transport and metabolism]; COG1506"
                     /db_xref="CDD:441115"
     Region          53..577
                     /region_name="COG2936"
                     /note="Predicted acyl esterase [General function
                     prediction only]"
                     /db_xref="CDD:442179"
     Region          <579..>745
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          759..1000
                     /region_name="CcmA"
                     /note="ABC-type multidrug transport system, ATPase
                     component [Defense mechanisms]; COG1131"
                     /db_xref="CDD:440746"
ORIGIN      
        1 mkrvaalvaa laligvttwl vwpsapevra qdqrisvvdg paddqrveld atffpppdgg
       61 kapavliahg fggskqsvre qairvaqdgy avltwsargf grstgeialn spdyevkdvk
      121 qlidwlakrp evqldasgdp rvgiaggsyg gaialmtaah dqrvdaivpq itwsdladal
      181 fpnaatqstg ntatapestg npdtapqsda aagttpesgt gttdqtgsgg sgaaqgaegg
      241 vfkrmwagif fgqgvsldsf amqgpergqa agpltpeqar cgrflpaicd iyqqvakdgr
      301 atpeavdllr ksspitvasr ikaptlliqg qrdslfplsh adanaraiaa tgtpvslawf
      361 dgghdggdge adwlfeqssa wfarylkgdd aaqaappvst ftvtrdggrd pgtrqrirlh
      421 peagsypgla gtdtttvqls gpeqsianpp ggapasistv pgiggllggq tnggvsidmp
      481 gqsatfesrp laaplqltgs stakvrvsgk geatlfakly dvadsaqlpt lpaglvapvr
      541 vtipegagst eatislpavd hqfavghrlr lvvtttdmgf atpaepatyq vslaspalav
      601 ptvrtlaapp tgvawwvwam plaavliaaa lmatgrtqsl artrlrrptp algaeprvts
      661 aglhdmsgat sngrspaptp ngqapdtppr pdvnaqphpa sdtdprdgtl papgfhgapv
      721 pgadphhasl sgtdphdvpa pgaeadglgg vadgakvple isgltkayrn gelavdglsf
      781 rveqgqvlgl lgpngagktt tmrmmmglir pddgeirifg ervtpgapvl srlgsfvegp
      841 gflphlsgrd nielywaatg rpradahfee aleianlgka leravrtysq gmrqrlaiaq
      901 amlglpdllv ldeptngldp pqiremrevl kryardgrtv ivsshmlaev eqtcshvvvm
      961 hrgrlvstgt vsrllssatv gnghgprled vfldligdka
//
LOCUS       WP_236050961             138 aa            linear   BCT 02-MAR-2025
DEFINITION  ASCH domain-containing protein [Nonomuraea cypriaca].
ACCESSION   WP_236050961
VERSION     WP_236050961.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea cypriaca
  ORGANISM  Nonomuraea cypriaca
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
REFERENCE   1  (residues 1 to 138)
  AUTHORS   Iyer,L.M., Burroughs,A.M. and Aravind,L.
  TITLE     The ASCH superfamily: novel domains with a fold related to the PUA
            domain and a potential role in RNA metabolism
  JOURNAL   Bioinformatics 22 (3), 257-263 (2006)
   PUBMED   16322048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016178.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04266.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Nonomuraea cypriaca"
                     /db_xref="taxon:1187855"
     Protein         1..138
                     /product="ASCH domain-containing protein"
                     /calculated_mol_wt=15039
     Region          25..127
                     /region_name="ASCH"
                     /note="ASC-1 homology or ASCH domain, a small beta-barrel
                     domain found in all three kingdoms of life. ASCH resembles
                     the RNA-binding PUA domain and may also interact with RNA.
                     ASCH has been proposed to function as an RNA-binding
                     domain during coactivation; cl01020"
                     /db_xref="CDD:445230"
ORIGIN      
        1 mdglrvlelg tpgklrtllt dltlsgkkta taglldvdyh aegeelehvg ehlilvddag
       61 anaaeievtg veltpfaevt wefaqsegeg yvsiedwrds hrrywssaeg yevedtttvv
      121 clwfrivsqs ghrssaat
//
LOCUS       WP_236051436             318 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase [Nonomuraea cypriaca].
ACCESSION   WP_236051436
VERSION     WP_236051436.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea cypriaca
  ORGANISM  Nonomuraea cypriaca
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
REFERENCE   1  (residues 1 to 318)
  AUTHORS   Urbach,C., Evrard,C., Pudzaitis,V., Fastrez,J., Soumillion,P. and
            Declercq,J.P.
  TITLE     Structure of PBP-A from Thermosynechococcus elongatus, a
            penicillin-binding protein closely related to class A
            beta-lactamases
  JOURNAL   J Mol Biol 386 (1), 109-120 (2009)
   PUBMED   19100272
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024748.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13354.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Nonomuraea cypriaca"
                     /db_xref="taxon:1187855"
     Protein         1..318
                     /product="serine hydrolase"
                     /GO_function="GO:0008800 - beta-lactamase activity
                     [Evidence IEA]"
                     /GO_process="GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=34647
     Region          72..293
                     /region_name="PenP"
                     /note="Beta-lactamase class A [Defense mechanisms];
                     COG2367"
                     /db_xref="CDD:441934"
ORIGIN      
        1 miaglgkaip rlvialalal pllpapreap arlqsaaptr vtrqepvrds arpdgprrlg
       61 rieeisveet lapvpvkqit kgldrflagr pgpvtamved latgrvyryr sgermitass
      121 akvqilmall artpwkklqa evrrdaelmi rysdnhaadr lwlriggapg fteagrkfgl
      181 khtqgvpgdc ldlycwgitr tsandqirlm kalvsgkspl rakdrdqvls lmgqvvdgqd
      241 wgvsaaacpg drvmlkngwl krvsterwam isvglirgdg rdyavavlte gstdvgygid
      301 tvegvitkim rdfrrcsa
//
LOCUS       WP_236051610              70 aa            linear   BCT 02-MAR-2025
DEFINITION  CGNR zinc finger domain-containing protein [Nonomuraea cypriaca].
ACCESSION   WP_236051610
VERSION     WP_236051610.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea cypriaca
  ORGANISM  Nonomuraea cypriaca
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023134.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11706.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Nonomuraea cypriaca"
                     /db_xref="taxon:1187855"
     Protein         1..70
                     /product="CGNR zinc finger domain-containing protein"
                     /calculated_mol_wt=7808
     Region          <5..64
                     /region_name="COG5516"
                     /note="Uncharacterized conserved protein containing a
                     Zn-ribbon-like motif, possibly RNA-binding [General
                     function prediction only]"
                     /db_xref="CDD:444267"
ORIGIN      
        1 mrdsarsaae llsemgesrv recarpectr ifvdrsrggk rqwcgmeecg nrikaanyrs
       61 rksrltatgv
//
LOCUS       WP_236051739             502 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1996 domain-containing protein [Nonomuraea cypriaca].
ACCESSION   WP_236051739
VERSION     WP_236051739.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea cypriaca
  ORGANISM  Nonomuraea cypriaca
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020919.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09362.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Nonomuraea cypriaca"
                     /db_xref="taxon:1187855"
     Protein         1..502
                     /product="DUF1996 domain-containing protein"
                     /calculated_mol_wt=53627
     Region          266..482
                     /region_name="DUF1996"
                     /note="Domain of unknown function (DUF1996); pfam09362"
                     /db_xref="CDD:462771"
ORIGIN      
        1 mrrsrrmaaa vsalavaagg lvsaavigvg vgpaladhcd paeatqsppa qqgeqdqnrn
       61 rnqdqnqdqd qpqdqeqqap deqspdqqap deqqdeqqdn ggqdadqqap eqqeqapeqq
      121 eqapeqqeqa pqgggaavld paesaepees astfgrrgrp nptrtatpiq tptpseepte
      181 dpteppagep teeptgspsp spsptatgga eeecadlgpf pedfvdirrv spgqgdarig
      241 rngssgsfvs qcgtnrnghn npdnfivapg vsngahhlhd yvgnlstdaf stdeslaaad
      301 ttcrqsdkst yfwpvlrdrk sdenvedpdg nvgqvlrars vslqfrgnat sdvvamprfl
      361 rlitgdakaa tngtanaraa wtcsgfqnri tpdkyplcpr gsqvirildf pscwdgqntd
      421 sanhrthvvf pdqsgacpqg tkavpqlrmt ltysvpqgps yaldafpeqk hnpvtdhadf
      481 anvmpdrlmq tvvscinrgr rc
//
LOCUS       WP_236051761              95 aa            linear   BCT 02-MAR-2025
DEFINITION  4Fe-4S binding protein, partial [Nonomuraea cypriaca].
ACCESSION   WP_236051761
VERSION     WP_236051761.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea cypriaca
  ORGANISM  Nonomuraea cypriaca
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012267.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00037.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Nonomuraea cypriaca"
                     /db_xref="taxon:1187855"
     Protein         1..>95
                     /product="4Fe-4S binding protein"
     Region          <1..83
                     /region_name="PRK05888"
                     /note="NADH-quinone oxidoreductase subunit NuoI"
                     /db_xref="CDD:235637"
ORIGIN      
        1 mlcarecpdw ciyidshket ipapeggrar qrnvldrfai dfalcmycgi cievcpfdal
       61 fwapefeyae gdirnllhek dklatwaqtv ppppp
//
LOCUS       WP_236051819             258 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Nonomuraea cypriaca].
ACCESSION   WP_236051819
VERSION     WP_236051819.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea cypriaca
  ORGANISM  Nonomuraea cypriaca
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
REFERENCE   1  (residues 1 to 258)
  AUTHORS   Davies,D.R., Mahnke Braam,L., Reznikoff,W.S. and Rayment,I.
  TITLE     The three-dimensional structure of a Tn5 transposase-related
            protein determined to 2.9-A resolution
  JOURNAL   J Biol Chem 274 (17), 11904-11913 (1999)
   PUBMED   10207011
REFERENCE   2  (residues 1 to 258)
  AUTHORS   DasSarma,S.
  TITLE     Identification and analysis of the gas vesicle gene cluster on an
            unstable plasmid of Halobacterium halobium
  JOURNAL   Experientia 49 (6-7), 482-486 (1993)
   PUBMED   8335077
REFERENCE   3  (residues 1 to 258)
  AUTHORS   Ferrante,A.A. and Lessie,T.G.
  TITLE     Nucleotide sequence of IS402 from Pseudomonas cepacia
  JOURNAL   Gene 102 (1), 143-144 (1991)
   PUBMED   1650732
REFERENCE   4  (residues 1 to 258)
  AUTHORS   De Meirsman,C., Van Soom,C., Verreth,C., Van Gool,A. and
            Vanderleyden,J.
  TITLE     Nucleotide sequence analysis of IS427 and its target sites in
            Agrobacterium tumefaciens T37
  JOURNAL   Plasmid 24 (3), 227-234 (1990)
   PUBMED   1963949
REFERENCE   5  (residues 1 to 258)
  AUTHORS   Sato,S., Nakada,Y. and Shiratsuchi,A.
  TITLE     IS421, a new insertion sequence in Escherichia coli
  JOURNAL   FEBS Lett 249 (1), 21-26 (1989)
   PUBMED   2542093
REFERENCE   6  (residues 1 to 258)
  AUTHORS   Kroger,M. and Hobom,G.
  TITLE     Structural analysis of insertion sequence IS5
  JOURNAL   Nature 297 (5862), 159-162 (1982)
   PUBMED   6281654
REFERENCE   7  (residues 1 to 258)
  AUTHORS   Klaer,R., Kuhn,S., Tillmann,E., Fritz,H.J. and Starlinger,P.
  TITLE     The sequence of IS4
  JOURNAL   Mol Gen Genet 181 (2), 169-175 (1981)
   PUBMED   6268937
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01609.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Nonomuraea cypriaca"
                     /db_xref="taxon:1187855"
     Protein         1..258
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=28128
     Region          <1..155
                     /region_name="transpos_IS4_1"
                     /note="IS4 family transposase; NF033592"
                     /db_xref="CDD:468101"
ORIGIN      
        1 mlvlfdrgfc shllfrdavt tgadlifrvs ssfalspvtv ledgtylael kprrkadgpp
       61 itvrvieysv asralgkpst tselfclvtn ltdpasapal elaalyarrw kievlykavk
      121 idlngarpvl rsghadtvla eiwsllavfq illrlsgaai sahtddgqpi sldqisikna
      181 rgalrrtigq atahvtemth amaaftrdvl saltprrprr ttdrkrkahq gdllktfrvi
      241 ctiiphpmtp rtaqpqaa
//
LOCUS       WP_236051938            1082 aa            linear   BCT 02-MAR-2025
DEFINITION  CARDB domain-containing protein [Nonomuraea cypriaca].
ACCESSION   WP_236051938
VERSION     WP_236051938.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea cypriaca
  ORGANISM  Nonomuraea cypriaca
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019325.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07705.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Nonomuraea cypriaca"
                     /db_xref="taxon:1187855"
     Protein         1..1082
                     /product="CARDB domain-containing protein"
                     /calculated_mol_wt=112648
     Region          32..147
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
     Region          <224..525
                     /region_name="COG1572"
                     /note="Serine protease, subtilase family
                     [Posttranslational modification, protein turnover,
                     chaperones]"
                     /db_xref="CDD:441180"
     Region          527..684
                     /region_name="CBM6-CBM35-CBM36_like_1"
                     /note="uncharacterized members of the carbohydrate binding
                     module 6 (CBM6) and CBM35_like superfamily; cd14490"
                     /db_xref="CDD:271156"
ORIGIN      
        1 mrallaalal vigflaapaw aaadtnlaag ktatassfnd vypaanvtdg nqgtywesan
       61 safpqwiqvd lgasasvnrl vlklpsgwpg rtqtltvqgt gnativpsat ytfnpaatit
      121 faatttrhvr llitgntgwp agqlaelevw gtttgdpggg anlatgkpit esshthtyva
      181 anandgslqt ywegaaypnt ltvqlganad lgsialklnp dtawgrrtqt ievlgreqsa
      241 tafttlvgqa aytfdpatgn svtipvtgra advrlritan tgapggqiae fqifgtpsan
      301 pdltvpslts apaapvetda vtlsatvrna gtagsaatsv tfyagdakvg tanvgalaag
      361 asttvsanig trdagtyqls akvdednkvi eqneanntgt gtltirpvat adlvaspvaw
      421 tpgnpaagtt vtfsvairnq gtvassggah gitltvvnes gtvvrtltgs tsgaiapgat
      481 tapvslgtwt aangeyavrt vladdanelp vkranntstl plfvgrganm pydtyeaeda
      541 vigggatrvg psreigtidg easgrravrl nqtgayveft trapantlvt rfsmpdapgg
      601 gglnstlnvy vngtflkavn ltsryawlyg aeaspnnspg sgpprhiyde anlllgttvp
      661 agskirlqkd aanphtyaid fadfeqatpi anpdpakyav pagfshqdvq naldkarmdt
      721 gltgvylpag dyqtsskfqv ygkavrivga gpwytrfhsp sgqentdvgf radatangst
      781 fagfayfgny tsridgpgkv fdfsnvanmt idniwaehqi cllwgtntdn mtirnsrirn
      841 vfadglnmtn gstgnhvtni etrstgddsf alfsaidnns geqfgnvyen ltslltwraa
      901 glavyggydn tfrniyvadt lvysgvtiss ldfgipmhgf gasppttfdn islvragghf
      961 wgqqtfpamw lfssskvfqg irvsnldivd ptysgimfqt gysgstplnp irdtvltnvs
     1021 isgaqksgda fdaksgfgiw vneqpepgqg pavgsatftn lrfsgnfqni knttstftln
     1081 vn
//
LOCUS       WP_236051939             183 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Nonomuraea cypriaca].
ACCESSION   WP_236051939
VERSION     WP_236051939.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea cypriaca
  ORGANISM  Nonomuraea cypriaca
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
REFERENCE   1  (residues 1 to 183)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 183)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Nonomuraea cypriaca"
                     /db_xref="taxon:1187855"
     Protein         1..183
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=20282
     Region          7..>164
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
ORIGIN      
        1 mgamrvhhln cgtmhpasqr lingtgglfa aatlvchcll veteqslili dtgfgtrdae
       61 epvgllgekf lrlirpvldp resalrqvir lgyqpadvrh ivlthldpdh tggisdfpwa
      121 tvhlharehe agmlrptrge rcryqpnqwa hgpvwstyde ttvttgsalr rytsslvclr
      181 rsc
//
LOCUS       WP_236052222             189 aa            linear   BCT 02-MAR-2025
DEFINITION  bifunctional ornithine acetyltransferase/N-acetylglutamate
            synthase, partial [Nonomuraea cypriaca].
ACCESSION   WP_236052222
VERSION     WP_236052222.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea cypriaca
  ORGANISM  Nonomuraea cypriaca
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
REFERENCE   1  (residues 1 to 189)
  AUTHORS   Sakanyan,V., Charlier,D., Legrain,C., Kochikyan,A., Mett,I.,
            Pierard,A. and Glansdorff,N.
  TITLE     Primary structure, partial purification and regulation of key
            enzymes of the acetyl cycle of arginine biosynthesis in Bacillus
            stearothermophilus: dual function of ornithine acetyltransferase
  JOURNAL   J Gen Microbiol 139 (3), 393-402 (1993)
   PUBMED   8473852
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014065.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01960.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Nonomuraea cypriaca"
                     /db_xref="taxon:1187855"
     Protein         1..>189
                     /product="bifunctional ornithine
                     acetyltransferase/N-acetylglutamate synthase"
                     /GO_function="GO:0004358 - glutamate N-acetyltransferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006526 - L-arginine biosynthetic process
                     [Evidence IEA]"
     Region          2..>157
                     /region_name="DmpA_OAT"
                     /note="DmpA/OAT superfamily; composed of L-aminopeptidase
                     D-amidase/D-esterase (DmpA), ornithine acetyltransferase
                     (OAT) and similar proteins. DmpA is an aminopeptidase that
                     releases N-terminal D and L amino acids from peptide
                     substrates. This group represents...; cl00603"
                     /db_xref="CDD:469836"
ORIGIN      
        1 msvtaplgfr aagvaagiks gdardlalvv ndgpsraaag vftanrvkaa pvlwsqqvla
       61 ggrlravvln sgganactgp egfqdthata ekvaevlqds agevavcstg ligerlpmdr
      121 llsgvesaat hlsrdgglha adairttdtv skisfkrgge aiasekasst pvggaqgakp
      181 svggevsst
//
LOCUS       WP_236052241             206 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Nonomuraea cypriaca].
ACCESSION   WP_236052241
VERSION     WP_236052241.1
KEYWORDS    RefSeq.
SOURCE      Nonomuraea cypriaca
  ORGANISM  Nonomuraea cypriaca
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Nonomuraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Nonomuraea cypriaca"
                     /db_xref="taxon:1187855"
     Protein         1..206
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=22395
     Region          1..84
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(1..2,16,33..35)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133407"
ORIGIN      
        1 mselsatsgv aiptikyylr egllhqgaql aatragydes hlrrlrlira lievgrlpva
       61 sikqviaava deslptrdvl givqyalspa vepepgedwq aaraqvdrli ddlgwdvrtd
      121 aptraeltqt varmrrlgmd vglepyaeaa qklaaeveme tvafdgprda avealvlgtv
      181 lygkafdalr rmahesesar rlhpes
//
LOCUS       WP_236052286             455 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Streptomyces musisoli].
ACCESSION   WP_236052286
VERSION     WP_236052286.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces musisoli
  ORGANISM  Streptomyces musisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 455)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 455)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 455)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 455)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Streptomyces musisoli"
                     /db_xref="taxon:2802280"
     Protein         1..455
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=48721
     Region          58..447
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mtparrtgvi rpptrprgls rrhfalalps allasgcaap hqgtgrpgdp ivltllshya
       61 sgelkaalqg pvdewnathd rvkvrtkave ftdllttfmv rqaagqgadi lhpyclwngq
      121 lvragvlrpa ppehaeeirr gygeaavgaa svggevygyp temqtyalyy nkrllreaga
      181 agpphtwrel eetayrtarr drygntlvqg fglstyddst tvgqtlalln aaggrfvaad
      241 grstaidspa gravfglehr lvtrgasapg vnvyqafpsg qvamvvgagw wtgslkslmg
      301 sayrdvgvap vpvpeahder atlctgfmlg vntasrfpre awqflswlna rkagvkgask
      361 garatrmstl qvsvgsltgr addmrtllga ggdpnlrpfl dalayavpep nvpgaqqaks
      421 llrkniealw tgqqsvdeal rttrrqvdqe varsw
//
LOCUS       WP_236052294             256 aa            linear   BCT 02-MAR-2025
DEFINITION  MvdC/MvdD family ATP grasp protein [Streptomyces musisoli].
ACCESSION   WP_236052294
VERSION     WP_236052294.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces musisoli
  ORGANISM  Streptomyces musisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 256)
  AUTHORS   Li,G., Patel,K., Zhang,Y., Pugmire,J.K., Ding,Y. and Bruner,S.D.
  TITLE     Structural and biochemical studies of an iterative ribosomal
            peptide macrocyclase
  JOURNAL   Proteins 90 (3), 670-679 (2022)
   PUBMED   34664307
REFERENCE   2  (residues 1 to 256)
  AUTHORS   Zhao,G., Kosek,D., Liu,H.B., Ohlemacher,S.I., Blackburne,B.,
            Nikolskaya,A., Makarova,K.S., Sun,J., Barry Iii,C.E., Koonin,E.V.,
            Dyda,F. and Bewley,C.A.
  TITLE     Structural Basis for a Dual Function ATP Grasp Ligase That Installs
            Single and Bicyclic omega-Ester Macrocycles in a New Multicore RiPP
            Natural Product
  JOURNAL   J Am Chem Soc 143 (21), 8056-8068 (2021)
   PUBMED   34028251
REFERENCE   3  (residues 1 to 256)
  AUTHORS   Li,K., Condurso,H.L., Li,G., Ding,Y. and Bruner,S.D.
  TITLE     Structural basis for precursor protein-directed ribosomal peptide
            macrocyclization
  JOURNAL   Nat Chem Biol 12 (11), 973-979 (2016)
   PUBMED   27669417
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF044697.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21068.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Streptomyces musisoli"
                     /db_xref="taxon:2802280"
     Protein         1..256
                     /product="MvdC/MvdD family ATP grasp protein"
                     /calculated_mol_wt=28431
     Region          7..256
                     /region_name="GRASP_SAV_5884"
                     /note="ATP-grasp ribosomal peptide maturase, SAV_5884
                     family; TIGR04187"
                     /db_xref="CDD:275040"
ORIGIN      
        1 mavggppvlv vtrlddatad evitelnrrr vpvvrldpgd fprevtlsgt fdsigpggal
       61 atgsrtvdlw nvrsvywrrp tpytadramd eqtgrwavee aryglggila alpgarylnh
      121 pwrnrdaeyk paqlataaac gftvpptlit ndpgrvraft dehgpviykp lreteytddt
      181 graltvwied vtpdqidrqi rhtahlfqqr vaktadirlt avgdhltavr idgspgvdwr
      241 rhydrltyts vpvprr
//
LOCUS       WP_236052440             523 aa            linear   BCT 02-MAR-2025
DEFINITION  IucA/IucC family protein [Streptomyces musisoli].
ACCESSION   WP_236052440
VERSION     WP_236052440.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces musisoli
  ORGANISM  Streptomyces musisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 523)
  AUTHORS   de Lorenzo,V. and Neilands,J.B.
  TITLE     Characterization of iucA and iucC genes of the aerobactin system of
            plasmid ColV-K30 in Escherichia coli
  JOURNAL   J Bacteriol 167 (1), 350-355 (1986)
   PUBMED   3087960
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016099.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04183.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Streptomyces musisoli"
                     /db_xref="taxon:2802280"
     Protein         1..523
                     /product="IucA/IucC family protein"
                     /GO_process="GO:0019290 - siderophore biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=56539
     Region          1..522
                     /region_name="IucA"
                     /note="Siderophore synthetase component IucA/IucC/SbnC
                     [Inorganic ion transport and metabolism]; COG4264"
                     /db_xref="CDD:443406"
ORIGIN      
        1 mlncllreva eplpdaagdr rvhrlpggrl lrvragrrps dpelytagtw rrighpelvk
       61 lvaeelrryt glpggdlpae midsrdtvaa lltararatp pgdpylrseq slltghpyhp
      121 apkargggpa aswlpyapea harfplallg vredqvaeeg dtsaldalgt appgyrllpa
      181 hpwqldltar elapafadgr llrlgttafd twptaavrtv yeprrdlflk fsldvritnd
      241 irrlwrhdlr klrrtdtaar haftergrsa agdalvergr saagealver grsaagealv
      301 ergrsaagea lverspsaaw lsdrgyrtaa fafeelavlv rdglrghllp gatpllaagl
      361 aegfegspla atadpdgwwe aylrqvvppa laafdvhgvv leahlqntlv avdaagtpvq
      421 alfrdaegak llpdvtraag werlvyclvv nhlteiagal adhhgldpwp aarrelarhd
      481 lpeipallta ptlpgktnll lrwtgadgad arylpfpnpl rtp
//
LOCUS       WP_236052499             122 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6479 family protein [Streptomyces].
ACCESSION   WP_236052499
VERSION     WP_236052499.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039795.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20087.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..122
                     /product="DUF6479 family protein"
                     /calculated_mol_wt=13047
     Region          1..108
                     /region_name="DUF6479"
                     /note="Family of unknown function (DUF6479); pfam20087"
                     /db_xref="CDD:466286"
ORIGIN      
        1 mntamyeaaa gvqvfgyivi lvvgvacaag liwafrmgfk vrrrepgppr peeqprmpst
       61 gpvretlemr epdevpraag dgerltpyqv gnvgsrraed qrrmrwspgs ggsfgggggg
      121 rt
//
LOCUS       WP_236052517             400 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5914 domain-containing protein [Streptomyces musisoli].
ACCESSION   WP_236052517
VERSION     WP_236052517.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces musisoli
  ORGANISM  Streptomyces musisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040247.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19299.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Streptomyces musisoli"
                     /db_xref="taxon:2802280"
     Protein         1..400
                     /product="DUF5914 domain-containing protein"
                     /calculated_mol_wt=41046
     Region          10..>157
                     /region_name="HcaE"
                     /note="Phenylpropionate dioxygenase or related
                     ring-hydroxylating dioxygenase, large terminal subunit
                     [Inorganic ion transport and metabolism, General function
                     prediction only]; COG4638"
                     /db_xref="CDD:443676"
     Region          106..397
                     /region_name="DUF5914"
                     /note="Domain of unknown function (DUF5914); pfam19299"
                     /db_xref="CDD:466032"
     Region          <180..>278
                     /region_name="auto_Ata"
                     /note="trimeric autotransporter adhesin Ata; NF033481"
                     /db_xref="CDD:411124"
ORIGIN      
        1 mkralarpsg nwyvvgasdd lrddrplart vqgrevvvwr gadgrpvggp gvcphlgapl
       61 rdspvrcgal vchwhglalh gtpyagwapl pvhddgvllw vrldevggea pldtpvvprr
      121 persraltav yvgtgvceve divanrldpw hgawfhpyaf ldlrvagspe glevgppgrs
      181 ggespcasgg gspcasgvgp pggsegdgsg lsahgtnspa dgpgnsangt nspadgpgns
      241 angtnapadg pgsstdgtns padgpggseg cpggsaygtd daftvdvsfk vagrlvvpvr
      301 avftapeprt vvmrivegeg egsvvethat plgpdelgrp rtavieavia asdrpgfvfa
      361 rraapllrpl arraagrlwr ddlayaerrw qlrstgrfpg
//
LOCUS       WP_236052719             263 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2637 domain-containing protein [Streptomyces musisoli].
ACCESSION   WP_236052719
VERSION     WP_236052719.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces musisoli
  ORGANISM  Streptomyces musisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022388.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10935.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Streptomyces musisoli"
                     /db_xref="taxon:2802280"
     Protein         1..263
                     /product="DUF2637 domain-containing protein"
                     /calculated_mol_wt=27950
     Region          22..>132
                     /region_name="DUF2637"
                     /note="Protein of unknown function (DUF2637); pfam10935"
                     /db_xref="CDD:431544"
ORIGIN      
        1 mrpsgssava trtdaqlgla igaavlttal tavsfwlsfe alhdlasahr lqgerawawp
       61 atvdtfiavg ellilraslm rrvdpwaial taagslgsia lnvagvgvsd dpldyvtaav
      121 ppvaallafg vlmrqvhefl vsrqetvtvp vmpvsapvis teaaieapni tepeetpeep
      181 keapevaeep eksqepltqr eqidlvvrgl ydalgnrrpa trhirqalad anlpnsdgtc
      241 rearkrveqa ephlkdlpda iaa
//
LOCUS       WP_236052918             989 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5682 family protein [Streptomyces musisoli].
ACCESSION   WP_236052918
VERSION     WP_236052918.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces musisoli
  ORGANISM  Streptomyces musisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040143.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18934.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..989
                     /organism="Streptomyces musisoli"
                     /db_xref="taxon:2802280"
     Protein         1..989
                     /product="DUF5682 family protein"
                     /calculated_mol_wt=102148
     Region          42..934
                     /region_name="DUF5682"
                     /note="Family of unknown function (DUF5682); pfam18934"
                     /db_xref="CDD:436841"
     Region          <121..>182
                     /region_name="auto_Ata"
                     /note="trimeric autotransporter adhesin Ata; NF033481"
                     /db_xref="CDD:411124"
ORIGIN      
        1 mtgadggkay dagplllgvr hhgpgsarav raaldaarpa avliegppea daliplaadp
       61 glrppvalla havdepgrsa fwpfaefspe wvairwaleq gvparfidlp athtlawdde
      121 kphepapddg heargagdgd dargsrtasd gegadgrgpr aasdgvgadg rgsraasdge
      181 gadgrgpgpa sdgeradgrg sgpgsdgdgd yargsgpvpd gdrmrvdpla vlaeaagydd
      241 perwwedvve hrgpgardpf apfaavaeam galrerygag grprdlvrea hmrlrlrear
      301 kefgsalavv cgawhvpalr ekttvtadra llrglprikt dltwvpwthr rlaraggyga
      361 gidspgwygh lfnapdrpve rwltkvagml reedrvvssa hvieavrlae tlaalrgrpl
      421 pglgettdav ravlcegsdv plalvhdrlv vgdvlgevpe sapavplqrd larqqrslrl
      481 kpeaperele ldlrgdtdag rsrllhrlrl lgvgwgepar srgstgtfre twllrwepel
      541 svrvaeagvw gttvhaaara kaeadataar aladvtalae qcllaglpda lpvvmrvlad
      601 raaldtdvgh laqalpalvr slrygdvrgt dtgalaevaa glaervfvgl ppacaaldad
      661 aademrehvd avhtavgllt eslagasteg gegdgggske vdadgrgefs grseagggke
      721 gaggdgvetg dgregagggg veagdgreea hrggvgaggd gveagggdrd ggghvgaggl
      781 rerwrgvlrv lslrdtapgv irgravrlll ddgelrpeea arlmglalsp gtppaaaaaw
      841 vegfaggggg lllvhderll glldtwltgv saesftdvlp llrrtfaaye pgvrrtlgel
      901 vrrgpgdrpg gaaaagatvp gfadepdtar adavlpvlrl llgldadhgt thatthapqh
      961 grtraarrdg ttgtayggad rggfagvgv
//
LOCUS       WP_236053282             795 aa            linear   BCT 02-MAR-2025
DEFINITION  SulP family inorganic anion transporter [Streptomyces musisoli].
ACCESSION   WP_236053282
VERSION     WP_236053282.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces musisoli
  ORGANISM  Streptomyces musisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00916.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Streptomyces musisoli"
                     /db_xref="taxon:2802280"
     Protein         1..795
                     /product="SulP family inorganic anion transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:1902358 - sulfate transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=81701
     Region          30..509
                     /region_name="SUL1"
                     /note="Sulfate permease or related transporter, MFS
                     superfamily [Inorganic ion transport and metabolism];
                     COG0659"
                     /db_xref="CDD:440424"
     Region          548..760
                     /region_name="CynT"
                     /note="Carbonic anhydrase [Inorganic ion transport and
                     metabolism]; COG0288"
                     /db_xref="CDD:440057"
ORIGIN      
        1 msacapphtp qphpphspap prrrlhlega dlsaavavfl ialplslgia latgaplqag
       61 lvaaavggvv vgrlggcplq vsgpaagltv vtadlihryg wrttcgitvl aglaqlglgc
      121 lrvargalav spavvhgmla gigitiavaq lhivlggspd ssvlanlrdl paqladlhpa
      181 svsmsaltla lllawprlpg ragrllrrvp aalvavtgaa ataaltglal prvglpswhs
      241 halaglpegp vlgvavavlt ttlvcsvqsl lgavavdklv asrpgpqsri grsdldrell
      301 gqgaanivsg algglpvagv avrstanvks gavsrnstml hgvlvvvaal lmvpvlegip
      361 laslaalvma vgiqmvslhh irtvtrhrev pvyavtalgv vflgvlqgvc lgiavavava
      421 lhrlahtrit haeergvhhl rvrgqltfla vprlsralhl vpqgahavve ldgsfmdhaa
      481 yeslqdwrsa htarggtael tgrrggirta gqapsaecrc rpwtpwrnhq scfagacaap
      541 agqeaggela rgissfqrnt aplvrdelar laregqrpaq lfltcsdsrl vtsmitasgp
      601 gdlfvvrnvg nlvpppgeeh gddsvaaaie yavdvlgvrs itvcghsgcg amqallttgg
      661 gdestplqrw lrhglpslar msgdrlggpr lagrapadav ellcltnvvq qlahlgahap
      721 varalargel elhgmyfhvg eaqayllags eegtvfedvt edvrrgedvc gparstfetg
      781 lnqfsgrpls sdprv
//
LOCUS       WP_236052941             190 aa            linear   BCT 02-MAR-2025
DEFINITION  ABATE domain-containing protein [Streptomyces musisoli].
ACCESSION   WP_236052941
VERSION     WP_236052941.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces musisoli
  ORGANISM  Streptomyces musisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 190)
  AUTHORS   Bakolitsa,C., Bateman,A., Jin,K.K., McMullan,D., Krishna,S.S.,
            Miller,M.D., Abdubek,P., Acosta,C., Astakhova,T., Axelrod,H.L.,
            Burra,P., Carlton,D., Chiu,H.J., Clayton,T., Das,D., Deller,M.C.,
            Duan,L., Elias,Y., Feuerhelm,J., Grant,J.C., Grzechnik,A.,
            Grzechnik,S.K., Han,G.W., Jaroszewski,L., Klock,H.E., Knuth,M.W.,
            Kozbial,P., Kumar,A., Marciano,D., Morse,A.T., Murphy,K.D.,
            Nigoghossian,E., Okach,L., Oommachen,S., Paulsen,J., Reyes,R.,
            Rife,C.L., Sefcovic,N., Tien,H., Trame,C.B., Trout,C.V., van den
            Bedem,H., Weekes,D., White,A., Xu,Q., Hodgson,K.O., Wooley,J.,
            Elsliger,M.A., Deacon,A.M., Godzik,A., Lesley,S. and Wilson,I.A.
  TITLE     The structure of Jann_2411 (DUF1470) from Jannaschia sp. at 1.45 A
            resolution reveals a new fold (the ABATE domain) and suggests its
            possible role as a transcription regulator
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 66 (Pt 10),
            1198-1204 (2010)
   PUBMED   20944211
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018984.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07336.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Streptomyces musisoli"
                     /db_xref="taxon:2802280"
     Protein         1..190
                     /product="ABATE domain-containing protein"
                     /calculated_mol_wt=19877
     Region          2..173
                     /region_name="COG5516"
                     /note="Uncharacterized conserved protein containing a
                     Zn-ribbon-like motif, possibly RNA-binding [General
                     function prediction only]"
                     /db_xref="CDD:444267"
ORIGIN      
        1 mppapgadrh paldlantai tlpggqsadl lgtpsaarhw lverglapda adlretcagr
       61 lralreqvra llaaridghp apadalaaln galtlapaas llhwspdrgl yraaahpttq
      121 ivehalaala adaadlltgp daerltacgs ppcnryllrh grrhwcstrc gdraraaray
      181 arrtgrnapd
//
LOCUS       WP_236053804             263 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Streptomyces sp. SP2-10].
ACCESSION   WP_236053804
VERSION     WP_236053804.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SP2-10
  ORGANISM  Streptomyces sp. SP2-10
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 263)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Streptomyces sp. SP2-10"
                     /db_xref="taxon:2873385"
     Protein         1..263
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=28721
     Region          16..250
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Site            order(21,23,56,85..86,158,197)
                     /site_type="active"
                     /db_xref="CDD:277317"
     Site            order(21,23,56,85,158,197)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277317"
ORIGIN      
        1 mhnsptttgg tpviviahls dthidseprs iertqavmry ledlpydlda vlvtgditdh
       61 glpseyeqar rlfssrhpvm lcpgnhdsrd afrthllaqe gatapvnqvl rsadvviavc
      121 dssvpgkdeg flsdetlawl edvldrtsdr tpvligfhhp paqlhvpfvd girqfgaerl
      181 aaladrhrni aaflcghaht aaatvfagrp llvapgvvst irlpwehgah prdhvhldha
      241 palafhildd agrltthfrq vrv
//
LOCUS       WP_236054315             156 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF4442 domain-containing protein [Streptomyces].
ACCESSION   WP_236054315
VERSION     WP_236054315.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025892.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14539.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..156
                     /product="DUF4442 domain-containing protein"
                     /calculated_mol_wt=16073
     Region          14..149
                     /region_name="hot_dog"
                     /note="The hotdog fold was initially identified in the E.
                     coli FabA (beta-hydroxydecanoyl-acyl carrier protein
                     (ACP)-dehydratase) structure and subsequently in 4HBT
                     (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A
                     number of other seemingly unrelated...; cl00509"
                     /db_xref="CDD:469797"
     Site            order(55..56,93..96)
                     /site_type="active"
                     /note="active site 2 [active]"
                     /db_xref="CDD:239527"
     Site            order(61,64..65,68,83..85)
                     /site_type="active"
                     /note="active site 1 [active]"
                     /db_xref="CDD:239527"
ORIGIN      
        1 maamsadqms igemlaatvp martlnlefv ettpdkavvs lpdqgayhnh vggphagamf
       61 tlgesasgai vlaafgdqls ravplavrae iaykklamga vtatatlgrp aaevvaelda
      121 gqrpefpvsi eirradgavt gemsvlwtlr ptdqgk
//
LOCUS       WP_236054400             218 aa            linear   BCT 02-MAR-2025
DEFINITION  recombinase family protein [Streptomyces musisoli].
ACCESSION   WP_236054400
VERSION     WP_236054400.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces musisoli
  ORGANISM  Streptomyces musisoli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 218)
  AUTHORS   Yang,W. and Steitz,T.A.
  TITLE     Crystal structure of the site-specific recombinase gamma delta
            resolvase complexed with a 34 bp cleavage site
  JOURNAL   Cell 82 (2), 193-207 (1995)
   PUBMED   7628011
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012464.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00239.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Streptomyces musisoli"
                     /db_xref="taxon:2802280"
     Protein         1..218
                     /product="recombinase family protein"
                     /GO_function="GO:0000150 - DNA strand exchange activity
                     [Evidence IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /calculated_mol_wt=22870
     Region          <50..>150
                     /region_name="SpoIVCA"
                     /note="Site-specific DNA recombinase SpoIVCA/DNA invertase
                     PinE [Replication, recombination and repair]; COG1961"
                     /db_xref="CDD:441564"
ORIGIN      
        1 magcvgcssg pgkdqhpgpr taqvrgsaad gaggqgprpa lpghlhrvpg rdaaeltala
       61 dhltahglvl emlagplphi ydptgpgkll fafvaamaet erenirestl egldtaarkg
      121 khdgrppvit ddmlhtvlrr ralgesveqi qpdlfiptgk rkgqnpsvas iyqalaehak
      181 reaypeavgq ahadfaalta napsgrqasr dqdfhsrt
//
LOCUS       WP_236054259             735 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-hairpin-helix domain-containing protein [Pseudomonas
            arcuscaelestis].
ACCESSION   WP_236054259
VERSION     WP_236054259.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas arcuscaelestis
  ORGANISM  Pseudomonas arcuscaelestis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 735)
  AUTHORS   Ramos,C., Hernandez-Tamayo,R., Lopez-Sanz,M., Carrasco,B.,
            Serrano,E., Alonso,J.C., Graumann,P.L. and Ayora,S.
  TITLE     The RecD2 helicase balances RecA activities
  JOURNAL   Nucleic Acids Res 50 (6), 3432-3444 (2022)
   PUBMED   35234892
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025843.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14490.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Pseudomonas arcuscaelestis"
                     /db_xref="taxon:2710591"
     Protein         1..735
                     /product="helix-hairpin-helix domain-containing protein"
                     /calculated_mol_wt=79786
     Region          146..238
                     /region_name="HHH_4"
                     /note="Helix-hairpin-helix containing domain; pfam14490"
                     /db_xref="CDD:464187"
     Region          <405..485
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 mteqlpdgaq aparergtlv divfrdpagp wsictfrrpd ltifsgtgnf gnailfedyi
       61 lygqripdid ggdfdvsqfs smppasiesl vgylstltgv prsatsklvq ffgedlipil
      121 dqspqrliea gisvseasal gkvwaeqrse qlalaqidve gippaklatl qrrlgyaanl
      181 sevlredpyl lyvhfedilf ssalnlakrf gvtnntlsav kgavvavlrr eawlghsyve
      241 grplieavmk mlrltrdeir pligkavtnl avarvvhann gqlqllslye aekalatlla
      301 kwvakdcvds edlvpterma akllkpleld tavtksltag lrsllaerfa liqcetladq
      361 lkiieglhli lrgfgtdviy sayttemade lnqrlddamv vnysaligid pktgvpaqhs
      421 krrisadvli vagadslgve emlrilravp eagrifmlga vkdlpahsig qpfaeiaqgg
      481 sarvfqasfw lparslqrea srrlwsgtlk lnaenfdpsq aiswlpvpqd miaetlpivv
      541 refakqlevd plldirvvvp aardaaggdl vgqlsaalam eftgeakpvd fhgkglfkgl
      601 pfvvrqsvss tihppfsvft aaelnaerlv akdraggsft lslaerldvf qgavmtpkli
      661 rgrvyevivl vvsegqhdlf nttllstlln sakttvlivg aldgvltgyt lreptvarsl
      721 lpnrmnpdvd qispt
//
LOCUS       WP_236054509             113 aa            linear   BCT 02-MAR-2025
DEFINITION  glutathione binding-like protein [Pseudomonas arcuscaelestis].
ACCESSION   WP_236054509
VERSION     WP_236054509.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas arcuscaelestis
  ORGANISM  Pseudomonas arcuscaelestis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 113)
  AUTHORS   Dixon,D.P., Lapthorn,A. and Edwards,R.
  TITLE     Plant glutathione transferases
  JOURNAL   Genome Biol 3 (3), REVIEWS3004 (2002)
   PUBMED   11897031
REFERENCE   2  (residues 1 to 113)
  AUTHORS   Nishida,M., Harada,S., Noguchi,S., Satow,Y., Inoue,H. and
            Takahashi,K.
  TITLE     Three-dimensional structure of Escherichia coli glutathione
            S-transferase complexed with glutathione sulfonate: catalytic roles
            of Cys10 and His106
  JOURNAL   J Mol Biol 281 (1), 135-147 (1998)
   PUBMED   9680481
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012273.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00043.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Pseudomonas arcuscaelestis"
                     /db_xref="taxon:2710591"
     Protein         1..113
                     /product="glutathione binding-like protein"
                     /calculated_mol_wt=12822
     Region          <19..102
                     /region_name="GST_C_family"
                     /note="C-terminal, alpha helical domain of the Glutathione
                     S-transferase family; cl02776"
                     /db_xref="CDD:470672"
ORIGIN      
        1 madvprlehg adswstgafr avrtppiqaa ieryrdltqq tfttldnqla hnrwlagpey
       61 siadiatfgw mhiariidfd fsrfnhlkaw yermelrpav qrgislpqpa tgp
//
LOCUS       WP_236054612             248 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ferritin-like fold-containing protein [Streptomyces].
ACCESSION   WP_236054612
VERSION     WP_236054612.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025166.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13794.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..248
                     /product="ferritin-like fold-containing protein"
                     /calculated_mol_wt=26497
     Region          32..216
                     /region_name="Ferritin_like"
                     /note="Ferritin-like superfamily of diiron-containing
                     four-helix-bundle proteins; cl00264"
                     /db_xref="CDD:469698"
     Site            order(49,79,82,131,162)
                     /site_type="other"
                     /note="dinuclear metal binding motif [ion binding]"
                     /db_xref="CDD:153097"
ORIGIN      
        1 mtssdkpeka saepaeptgv aaqdwaqasa dpqyraavvd llgalaygel aaferlaeda
       61 klaptladka elakmasaef hhferlrdrl teigeeptaa mdpfvaaldg fhrqtapsdw
      121 leglvkayvg dsiasdfyre vaarldsdtr elvlavlddt ghaefavekv raaidadprv
      181 ggrlalwarr lmgealsqsq rvvadrdals tmlvggvadg fdlaevgrmf sriteahtkr
      241 maalglaa
//
LOCUS       WP_236054310             753 aa            linear   BCT 02-MAR-2025
DEFINITION  tail fiber protein [Pseudomonas arcuscaelestis].
ACCESSION   WP_236054310
VERSION     WP_236054310.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas arcuscaelestis
  ORGANISM  Pseudomonas arcuscaelestis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 753)
  AUTHORS   Thomassen,E., Gielen,G., Schutz,M., Schoehn,G., Abrahams,J.P.,
            Miller,S. and van Raaij,M.J.
  TITLE     The structure of the receptor-binding domain of the bacteriophage
            T4 short tail fibre reveals a knitted trimeric metal-binding fold
  JOURNAL   J Mol Biol 331 (2), 361-373 (2003)
   PUBMED   12888344
REFERENCE   2  (residues 1 to 753)
  AUTHORS   Cubo,M.T., Economou,A., Murphy,G., Johnston,A.W. and Downie,J.A.
  TITLE     Molecular characterization and regulation of the
            rhizosphere-expressed genes rhiABCR that can influence nodulation
            by Rhizobium leguminosarum biovar viciae
  JOURNAL   J Bacteriol 174 (12), 4026-4035 (1992)
   PUBMED   1597418
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07484.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Pseudomonas arcuscaelestis"
                     /db_xref="taxon:2710591"
     Protein         1..753
                     /product="tail fiber protein"
                     /calculated_mol_wt=76765
     Region          <500..558
                     /region_name="pyocin_knob"
                     /note="knob domain of R1 and R2 pyocins and similar
                     domains; cd19958"
                     /db_xref="CDD:410997"
     Site            order(513,515,517..519,524,529..531,533..535,539,541,
                     543..545,547,552,555..558)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:410997"
     Region          564..712
                     /region_name="MdpB"
                     /note="Phage tail collar domain [Mobilome: prophages,
                     transposons]; COG4675"
                     /db_xref="CDD:443711"
     Region          564..621
                     /region_name="Collar"
                     /note="Phage Tail Collar Domain; pfam07484"
                     /db_xref="CDD:429485"
ORIGIN      
        1 mdypkstpgv glvdgkfvde nptlgqigsl ipaswgnavt keilnviesa gmapaegdls
       61 qllraiqtis atdakrsvrc attgpialsg lqnidgvsml agdrvlvknq asaaqnwiyt
      121 vaagawvral danesaecip ghlvpvqggt vnggtswqlt nlvpptlgtt alnfsqalgr
      181 tgvvageytk vkvgvdgrvl sasspdtlaa mgikngleig qvglaavvap rlddfkavvp
      241 agfyqaygek vaapftptpn gppgtpgvll gviacsprad mtayvvmgyt gfvwfgfygk
      301 ddatvkwtsa ltsqdlavin talatkasla spaltgvptt ptpvagannt qiantafvka
      361 tidavigaap galdtlvela kalgndpnfa ttitnalagk qpldatltal aalsfvpnrm
      421 iystgpdqfa laplsdymrg lfaaadhaqa rqtlgaaats hthamaditg laaalnaarg
      481 lnqgstnidp daaveqvilt nhartpnaas ywhitttfys tisatsnrgq iavqynggsa
      541 vyarssyqnv wtewtqldnn tppgtvvyfp ganpppgfik angallnrtt yaalfaaigv
      601 iggagdgrtt fnvpdlrgef iralddgrgv dpgrllgsvq tsqnashthn atisvsgeht
      661 hsvvgtaaeg gshthnlara qnnsvgslsn rvttaqgdgg taistavsgg ahvhavsgta
      721 avagghshsa tilasggnet rprsvallac iky
//
LOCUS       WP_236054733             190 aa            linear   BCT 02-MAR-2025
DEFINITION  site-specific integrase [Mycobacterium sp. SM1].
ACCESSION   WP_236054733
VERSION     WP_236054733.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium sp. SM1
  ORGANISM  Mycobacterium sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 190)
  AUTHORS   Subramanya,H.S., Arciszewska,L.K., Baker,R.A., Bird,L.E.,
            Sherratt,D.J. and Wigley,D.B.
  TITLE     Crystal structure of the site-specific recombinase, XerD
  JOURNAL   EMBO J 16 (17), 5178-5187 (1997)
   PUBMED   9311978
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014898.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02899.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Mycobacterium sp. SM1"
                     /db_xref="taxon:2816243"
     Protein         1..190
                     /product="site-specific integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=20672
     Region          27..>118
                     /region_name="XerD"
                     /note="Site-specific recombinase XerD [Replication,
                     recombination and repair]; COG4974"
                     /db_xref="CDD:443999"
ORIGIN      
        1 maypvalapa agqrtwtvlg edcatveave ewieahrhlw spntvrgyat slaqwwsfle
       61 qrgqadgwrd vgvpavtafl swqrngrtve tslaesgdap savtlearla alisfyrwhq
      121 avsgvevagr llrgtprrrp argllahlda rsapaasslv rvrrvrardr prccaaadpg
      181 dsgrlrgvrp
//
LOCUS       WP_236054764             561 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4158 domain-containing protein [Mycobacterium sp. SM1].
ACCESSION   WP_236054764
VERSION     WP_236054764.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium sp. SM1
  ORGANISM  Mycobacterium sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025079.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13700.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Mycobacterium sp. SM1"
                     /db_xref="taxon:2816243"
     Protein         1..561
                     /product="DUF4158 domain-containing protein"
                     /calculated_mol_wt=62156
     Region          24..>518
                     /region_name="transpos_Tn3"
                     /note="Tn3 family transposase; NF033527"
                     /db_xref="CDD:468061"
ORIGIN      
        1 mpvrylsdpe larlsswpde iavedavtyf tlsaddlvlr qsvvagglqr qhnrlgvavq
       61 lstlpwlgwi pddlagcppl alhrlaqalg igpdtssall aeyggwqgrt rrehrtrvla
      121 rlgwrlcatg erklldefll aralehdapg vlpqlacdwl raerivrppa dsltrrvaaa
      181 rdaaraetyh rlgpllqppr pmqldslldv dpdlgltrla wlrrgatvat pellkaeldk
      241 leflrrhgad rldlsqlpvg rqrmlaeigr rstnqalqra avdrrhpvll atlaetyiev
      301 ldelvqlldq alggadsrar helsqrlvdr akaevdrgrl ldeildvlad ptvpdeqagr
      361 vvrqrvgmqr liaarrpped rgqrdhghfd llaarykytr tftplviaal sltrntasas
      421 vtalltavev lrglntaart avpdkattaa atvfvptrwr gyldtargqg rgaayrpywe
      481 lsvlygvqag lrsgdlwvpg srrytnpstl llppdrwagh prrllhrhrh rarrvpatrs
      541 tpgpaargsr gigdsldgpr r
//
LOCUS       WP_236054845             106 aa            linear   BCT 02-MAR-2025
DEFINITION  group II intron maturase-specific domain-containing protein
            [Mycobacterium sp. SM1].
ACCESSION   WP_236054845
VERSION     WP_236054845.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium sp. SM1
  ORGANISM  Mycobacterium sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 106)
  AUTHORS   Centron,D. and Roy,P.H.
  TITLE     Presence of a group II intron in a multiresistant Serratia
            marcescens strain that harbors three integrons and a novel gene
            fusion
  JOURNAL   Antimicrob Agents Chemother 46 (5), 1402-1409 (2002)
   PUBMED   11959575
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019984.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08388.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Mycobacterium sp. SM1"
                     /db_xref="taxon:2816243"
     Protein         1..106
                     /product="group II intron maturase-specific
                     domain-containing protein"
                     /calculated_mol_wt=12182
     Region          1..61
                     /region_name="GIIM"
                     /note="Group II intron, maturase-specific domain;
                     pfam08388"
                     /db_xref="CDD:429966"
ORIGIN      
        1 mtirsrlllp vevvvedlnr flrgwanyfr yghsairfhk iqqhaqdrla lftgrqhkrg
       61 rgfglsvlay qstdycglys lngtviapra nkpwrekpna ggerrr
//
LOCUS       WP_236055043             409 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: VWA domain-containing protein [Streptomyces].
ACCESSION   WP_236055043
VERSION     WP_236055043.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
REFERENCE   1  (residues 1 to 409)
  AUTHORS   Santiago,B., Schubel,U., Egelseer,C. and Meyer,O.
  TITLE     Sequence analysis, characterization and CO-specific transcription
            of the cox gene cluster on the megaplasmid pHCG3 of Oligotropha
            carboxidovorans
  JOURNAL   Gene 236 (1), 115-124 (1999)
   PUBMED   10433972
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017569.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05762.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..409
                     /product="VWA domain-containing protein"
                     /calculated_mol_wt=43159
     Region          156..393
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(243,245,247,302,328)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238739"
ORIGIN      
        1 mdaaspeger pderlrrwrm vlgedgaegt graltgrdaa mdgaltalyd ggkkpggsgg
       61 aersaglgas apsvarwlgd irtyfpapvv qvmqrdaidr lglsalllep emleavepdv
      121 hlvgtllslg kampettret aravvrkvvd dlerrlatrt raaltgaldr saraarprhr
      181 didwnrtira nlknyvslpg regreggesa egregagtvi perlvgygrt drsvkkdvil
      241 cvdqsgsmaa svvhaavfga vlasmrtlat rlvvfdtavv dltdqlddpv dvlfgtqlgg
      301 gtdinralay cqsritrpad tvvvlisdlh eggirdgmvr raaamkasgv rfvtllalsd
      361 egtpsydreh aaalaalgvp afactpdlfp evmaaaiggr plpipdagp
//
LOCUS       WP_236055170             266 aa            linear   BCT 02-MAR-2025
DEFINITION  glycine betaine ABC transporter substrate-binding protein
            [Mycobacterium sp. SM1].
ACCESSION   WP_236055170
VERSION     WP_236055170.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium sp. SM1
  ORGANISM  Mycobacterium sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 266)
  AUTHORS   Fraser,K.R., Harvie,D., Coote,P.J. and O'Byrne,C.P.
  TITLE     Identification and characterization of an ATP binding cassette
            L-carnitine transporter in Listeria monocytogenes
  JOURNAL   Appl Environ Microbiol 66 (11), 4696-4704 (2000)
   PUBMED   11055912
REFERENCE   2  (residues 1 to 266)
  AUTHORS   Kappes,R.M., Kempf,B., Kneip,S., Boch,J., Gade,J., Meier-Wagner,J.
            and Bremer,E.
  TITLE     Two evolutionarily closely related ABC transporters mediate the
            uptake of choline for synthesis of the osmoprotectant glycine
            betaine in Bacillus subtilis
  JOURNAL   Mol Microbiol 32 (1), 203-216 (1999)
   PUBMED   10216873
REFERENCE   3  (residues 1 to 266)
  AUTHORS   Kempf,B. and Bremer,E.
  TITLE     OpuA, an osmotically regulated binding protein-dependent transport
            system for the osmoprotectant glycine betaine in Bacillus subtilis
  JOURNAL   J Biol Chem 270 (28), 16701-16713 (1995)
   PUBMED   7622480
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015995.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04069.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Mycobacterium sp. SM1"
                     /db_xref="taxon:2816243"
     Protein         1..266
                     /product="glycine betaine ABC transporter
                     substrate-binding protein"
                     /GO_component="GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=27460
     Region          13..260
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mvgcskghht prqlvvasrs dsesvlladl yagalrsygf parvvsvsdp lteldsgavd
       61 vvpgltgqll rtfqpgasvr sdtqvyramv aalpegiaag dyataaedkp alavsqstak
      121 awggnelsel prhceglvig siagvatpaa vsgcrlpaar efpdsasmfa avqagqltag
      181 wttttapdvp adlvvltdgk pallqaenvv plyrrnelta rqvlainema gvldtaalve
      241 mrrrvlggae pqavadgwla ehplgr
//
LOCUS       WP_236055324             177 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphate-starvation-inducible PsiE family protein [Mycobacterium
            sp. SM1].
ACCESSION   WP_236055324
VERSION     WP_236055324.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium sp. SM1
  ORGANISM  Mycobacterium sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 177)
  AUTHORS   Kim,S.K., Kimura,S., Shinagawa,H., Nakata,A., Lee,K.S., Wanner,B.L.
            and Makino,K.
  TITLE     Dual transcriptional regulation of the Escherichia coli
            phosphate-starvation-inducible psiE gene of the phosphate regulon
            by PhoB and the cyclic AMP (cAMP)-cAMP receptor protein complex
  JOURNAL   J Bacteriol 182 (19), 5596-5599 (2000)
   PUBMED   10986267
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017913.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06146.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Mycobacterium sp. SM1"
                     /db_xref="taxon:2816243"
     Protein         1..177
                     /product="phosphate-starvation-inducible PsiE family
                     protein"
                     /calculated_mol_wt=19150
     Region          <79..>133
                     /region_name="PsiE"
                     /note="Phosphate-starvation-inducible E family; cl46405"
                     /db_xref="CDD:480745"
ORIGIN      
        1 mnrywrqrrg mmiadgdgpq gglggrlsta vtrrfetmvn gvaftfliaa ailaaigaaq
       61 avieaaslrt tamqggtlvl drillvliia elaytirtvi vsheiaaepf lfvgliatvr
      121 rilivtarfe epqsnaqldr lllelgvlal lvvaiaaaim mirycdarfa rsrrepi
//
LOCUS       WP_236055375             323 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerophosphodiester phosphodiesterase family protein
            [Mycobacterium sp. SM1].
ACCESSION   WP_236055375
VERSION     WP_236055375.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium sp. SM1
  ORGANISM  Mycobacterium sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 323)
  AUTHORS   Kim,H. and Farrand,S.K.
  TITLE     Characterization of the acc operon from the nopaline-type Ti
            plasmid pTiC58, which encodes utilization of agrocinopines A and B
            and susceptibility to agrocin 84
  JOURNAL   J Bacteriol 179 (23), 7559-7572 (1997)
   PUBMED   9393724
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03009.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Mycobacterium sp. SM1"
                     /db_xref="taxon:2816243"
     Protein         1..323
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /GO_function="GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=34387
     Region          15..304
                     /region_name="PI-PLCc_GDPD_SF"
                     /note="Catalytic domain of phosphoinositide-specific
                     phospholipase C-like phosphodiesterases superfamily;
                     cl14615"
                     /db_xref="CDD:472694"
     Site            order(20,47,49,144,183,278)
                     /site_type="active"
                     /db_xref="CDD:176498"
     Site            order(20,62)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176498"
ORIGIN      
        1 mglpgppaga apavfdlvah qggqgeatge slrafaksle lgvstlefdv vitrdgqplv
       61 whdqrilpqk cadtapvlag dpqypyvgkl vrnltvaqlr tldcgkpage fpraevvwgt
      121 kiatlpevfa ladsyrakvr ydieakvdae hpaasadpre fvdtiiaaar sagkadcvei
      181 esfdwrvlpm vhqvqpsipv aalwnettwa pdspwlggid pavvgdpilg ammvganils
      241 pgysvpygqt trdpgftlva dkpfvdraha lglkvipwti ndadtmraqi aagadgiitd
      301 ypallrslma rdgmplpqay hpk
//
LOCUS       WP_236055567             875 aa            linear   BCT 02-MAR-2025
DEFINITION  SpoIIE family protein phosphatase [Streptomyces silvae].
ACCESSION   WP_236055567
VERSION     WP_236055567.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces silvae
  ORGANISM  Streptomyces silvae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 875)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Streptomyces silvae"
                     /db_xref="taxon:2803812"
     Protein         1..875
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=93244
     Region          19..134
                     /region_name="RsbW"
                     /note="Anti-sigma regulatory factor (Ser/Thr protein
                     kinase) [Signal transduction mechanisms]; COG2172"
                     /db_xref="CDD:441775"
     Region          162..260
                     /region_name="PAS"
                     /note="PAS fold; pfam00989"
                     /db_xref="CDD:395786"
     Region          295..449
                     /region_name="PtsP"
                     /note="Signal transduction protein containing GAF and PtsI
                     domains [Signal transduction mechanisms]; COG3605"
                     /db_xref="CDD:442824"
     Region          440..869
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
ORIGIN      
        1 mgsavitara aatfdpvgrs vatarafvrd tlqgwgytdv vddavvltse lvtnavvhag
       61 taadvlclrt edgvrvevsd hyperevplq ssgldfgspd reggrglllc aalasrwgve
      121 ytpthkhvwf qldlperpvg irsaspvlpt sllpvaeqrv rvavvqtdgs gsiaswndda
      181 sflfgyaaeq vagkqltdfv awphtpgtnt giadalqlsr wegsygirga dgrvipvyas
      241 hlrvrdadge pstvcllvrd yeravlqtpv rapvsdssae nrstdpfeif igspapddld
      301 gllqrtvera rdmldadaaf lllatddete levrattglp sarqrfarvp veagtgrygs
      361 armpavhedl tvvpgavpll sdtgmrsvvt vplkvegrlt gslgvaaeaa grysneealr
      421 lqfaadrial avesarlgel erlrrgslsf lveasdllag tldrdqtlal maqmtvptla
      481 twcavytiad qssepylsyv lhedeeridg lkallssidp pdpvpapgar iwpapteagh
      541 eaalrtskrt lgrgaplsmg aaarttlata vavggetvvl plvarnrvig mltlgkpsde
      601 hfrqeilela edlsrraala ldnarlyser maisqslqrs llppglpdvp nveieviyra
      661 agegnevggd fydvfpirdg aygfaigdvc gtgpeaaavt glarhalrll aregfggpav
      721 lerlnaaild egarsrfltl lygelwpqed gsallkvvca ghplplrlrq ngsveaaaep
      781 qpllgviedl elyeqevtle pgdvllcvtd gvterregtr mlgddgladv lamctgltag
      841 avagrilrav erfaaepasd dmailamrvp epqnl
//
LOCUS       WP_236055713             432 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [Streptomyces].
ACCESSION   WP_236055713
VERSION     WP_236055713.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..432
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45317
     Region          47..390
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(66,116..117,119..121,124,143,146..147,150,225,
                     228..229,232..234,237,263,267,317..318,322,326,342,
                     345..346,349..350,353)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 msrqerhvls pqtrkvllgv nsgialahig nyiwfphlis tlgveysgfw agfvmfltyv
       61 grlsatffye gvaarfgtrt siiagiavea valggmgfad gvpfysllaf fvgfgsgisf
      121 pglknilgtl paadrpkafs sfqmscqlgv iagavigglf lgssmtilfl vvfvlfagyc
      181 aaaasfipad agdlgdpaak dtplvnvail kglqlggggs yfllssvfwi lsisflvgmp
      241 lhmeefaadl pvstpfwitg lallvlqypa frfmskhlrp gqvmgvafla maaayalfga
      301 gqtavwvvvg clvvvfgdil ftpsfdlwva drmpadrlar amgamhffrs fgnmvgtlaa
      361 galydlsrst dipglnwyav gaialvcaav sfssakkega apeqgtpafa kteaapvaep
      421 vveprqaads ta
//
LOCUS       WP_236055740             122 aa            linear   BCT 02-MAR-2025
DEFINITION  group II intron maturase-specific domain-containing protein
            [Mycobacterium sp. SM1].
ACCESSION   WP_236055740
VERSION     WP_236055740.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium sp. SM1
  ORGANISM  Mycobacterium sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 122)
  AUTHORS   Centron,D. and Roy,P.H.
  TITLE     Presence of a group II intron in a multiresistant Serratia
            marcescens strain that harbors three integrons and a novel gene
            fusion
  JOURNAL   Antimicrob Agents Chemother 46 (5), 1402-1409 (2002)
   PUBMED   11959575
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019984.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08388.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Mycobacterium sp. SM1"
                     /db_xref="taxon:2816243"
     Protein         1..122
                     /product="group II intron maturase-specific
                     domain-containing protein"
                     /calculated_mol_wt=13534
     Region          <3..50
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 mcrtrgsnal aivarlnpii rgwatynrgm vsskifssld sylwrltyrw gaavtrgnhk
       61 rrswtsisag stssettagc taipttrrpe rnhhphgqir lgshrpphhg rgpgisrrpr
      121 ar
//
LOCUS       WP_236055754             176 aa            linear   BCT 02-MAR-2025
DEFINITION  nuclear transport factor 2 family protein [Streptomyces silvae].
ACCESSION   WP_236055754
VERSION     WP_236055754.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces silvae
  ORGANISM  Streptomyces silvae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024966.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13577.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Streptomyces silvae"
                     /db_xref="taxon:2803812"
     Protein         1..176
                     /product="nuclear transport factor 2 family protein"
                     /calculated_mol_wt=18043
ORIGIN      
        1 marvsmtttp lraaalaltv aaavaagwgg wsrydaahda saayaqarnd alaageqavq
       61 nmntldharl dqgldsweds ttgdlhkqlv dgrdafveqi eaaktvstak vlsgavteld
      121 dragkagvmv alrvtvtape gepavkesrm lgqltrtsgg wklsalgqap vgntag
//
LOCUS       WP_236055929             252 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GDSL-type esterase/lipase family protein
            [Streptomyces].
ACCESSION   WP_236055929
VERSION     WP_236055929.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
REFERENCE   1  (residues 1 to 252)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 252)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..252
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=26354
     Region          94..235
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(103,125,215,218)
                     /site_type="active"
                     /db_xref="CDD:238871"
ORIGIN      
        1 maqvstvtsq agavishdva mrflfvgdsm tigrsgdftw ryrmwqhlea tlgdggyait
       61 gprtalydte anaplshayg dasfpaparr hlagwgegwl hmapvvadav asaradvllv
      121 slglidlgfy tdstqtaana rafitaaraa nprirlvllp vipniraesd apfaaecdrf
      181 ntllakavad vdapaspvll ashptgydih tdtydgthpg ptgehklaga fadamhqawg
      241 vggpyagala ta
//
LOCUS       WP_236056220              72 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase family 18 protein, partial [Streptomyces
            silvae].
ACCESSION   WP_236056220
VERSION     WP_236056220.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces silvae
  ORGANISM  Streptomyces silvae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 72)
  AUTHORS   Perrakis,A., Tews,I., Dauter,Z., Oppenheim,A.B., Chet,I.,
            Wilson,K.S. and Vorgias,C.E.
  TITLE     Crystal structure of a bacterial chitinase at 2.3 A resolution
  JOURNAL   Structure 2 (12), 1169-1180 (1994)
   PUBMED   7704527
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00704.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Streptomyces silvae"
                     /db_xref="taxon:2803812"
     Protein         <1..72
                     /product="glycosyl hydrolase family 18 protein"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <1..72
                     /region_name="ChiA"
                     /note="Chitinase, GH18 family [Carbohydrate transport and
                     metabolism]; COG3325"
                     /db_xref="CDD:442554"
ORIGIN      
        1 iedykvlkns cpatdtvagt ayalcgsnww sydtpatiat kmdykseqgl ggtffwelsg
       61 dtsdgelira in
//
LOCUS       WP_236056423             182 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: cupin domain-containing protein [Streptomyces].
ACCESSION   WP_236056423
VERSION     WP_236056423.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
REFERENCE   1  (residues 1 to 182)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07883.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..182
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=18457
     Region          80..167
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 mrfggvvdes sanggtgvtd gagatartkr svlrkfllvg vcvaalglvp aaavatpgsg
       61 vsgtvvakgt sqgklkvktp rgrtdvtfre itvepggstg whthrgqlia vvksgtltrt
      121 lddcsvevtp agtsfiepsg adhrhigrnl gtepvvlwvt yllpegsels ddadaahcpg
      181 gr
//
LOCUS       WP_236056871             169 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: YbaK/EbsC family protein [Streptomyces].
ACCESSION   WP_236056871
VERSION     WP_236056871.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
REFERENCE   1  (residues 1 to 169)
  AUTHORS   So,B.R., An,S., Kumar,S., Das,M., Turner,D.A., Hadad,C.M. and
            Musier-Forsyth,K.
  TITLE     Substrate-mediated fidelity mechanism ensures accurate decoding of
            proline codons
  JOURNAL   J Biol Chem 286 (36), 31810-31820 (2011)
   PUBMED   21768119
REFERENCE   2  (residues 1 to 169)
  AUTHORS   An,S. and Musier-Forsyth,K.
  TITLE     Cys-tRNA(Pro) editing by Haemophilus influenzae YbaK via a novel
            synthetase.YbaK.tRNA ternary complex
  JOURNAL   J Biol Chem 280 (41), 34465-34472 (2005)
   PUBMED   16087664
REFERENCE   3  (residues 1 to 169)
  AUTHORS   Ruan,B. and Soll,D.
  TITLE     The bacterial YbaK protein is a Cys-tRNAPro and Cys-tRNA Cys
            deacylase
  JOURNAL   J Biol Chem 280 (27), 25887-25891 (2005)
   PUBMED   15886196
REFERENCE   4  (residues 1 to 169)
  AUTHORS   Ahel,I., Korencic,D., Ibba,M. and Soll,D.
  TITLE     Trans-editing of mischarged tRNAs
  JOURNAL   Proc Natl Acad Sci U S A 100 (26), 15422-15427 (2003)
   PUBMED   14663147
REFERENCE   5  (residues 1 to 169)
  AUTHORS   Zhang,H., Huang,K., Li,Z., Banerjei,L., Fisher,K.E., Grishin,N.V.,
            Eisenstein,E. and Herzberg,O.
  TITLE     Crystal structure of YbaK protein from Haemophilus influenzae
            (HI1434) at 1.8 A resolution: functional implications
  JOURNAL   Proteins 40 (1), 86-97 (2000)
   PUBMED   10813833
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015999.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04073.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..169
                     /product="YbaK/EbsC family protein"
                     /GO_function="GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA]"
                     /calculated_mol_wt=18422
     Region          2..142
                     /region_name="YbaK_like"
                     /note="YbaK-like. The YbaK family of deacylase domains
                     includes the INS amino acid-editing domain of the
                     bacterial class II prolyl tRNA synthetase (ProRS), and
                     it's trans-acting homologs, YbaK, ProX, and PrdX. The
                     primary function of INS is to hydrolyze...; cl00022"
                     /db_xref="CDD:444658"
     Site            order(41,98..99,126)
                     /site_type="active"
                     /note="putative deacylase active site [active]"
                     /db_xref="CDD:239828"
ORIGIN      
        1 mrlislldes garyrvidha pegrteevsr yrghpvaqga kclvvmvktg krtkryflav
       61 vpgdarvdlp glkalaegsy vsfasadkae alsgsvsgti lpfsfhpdle lvvdpgvleh
      121 eeiffnaarl drslalraed yryhlhrvga mirpitapse petgpvrqa
//
LOCUS       WP_236056899             503 aa            linear   BCT 02-MAR-2025
DEFINITION  S1 RNA-binding domain-containing protein [Streptomyces silvae].
ACCESSION   WP_236056899
VERSION     WP_236056899.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces silvae
  ORGANISM  Streptomyces silvae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 503)
  AUTHORS   Bycroft,M., Hubbard,T.J., Proctor,M., Freund,S.M. and Murzin,A.G.
  TITLE     The solution structure of the S1 RNA binding domain: a member of an
            ancient nucleic acid-binding fold
  JOURNAL   Cell 88 (2), 235-242 (1997)
   PUBMED   9008164
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012784.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00575.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Streptomyces silvae"
                     /db_xref="taxon:2803812"
     Protein         1..503
                     /product="S1 RNA-binding domain-containing protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /calculated_mol_wt=54232
     Region          <333..499
                     /region_name="RpsA"
                     /note="Ribosomal protein S1 [Translation, ribosomal
                     structure and biogenesis]; COG0539"
                     /db_xref="CDD:440305"
ORIGIN      
        1 mtqdgavlpf vyrvtkydpa drdehghyhg pqdivsdrge seaayleava afaadagidr
       61 lavrepgvps lahlgvtaaa ddyglgalfs nglhgfhdga evqlptalel vrcmlresga
      121 wcrleadgtf evhvgwdqyl yvctsrpsee avartralgl fpenlgaspy avetespdvq
      181 rpadaefwsv vawavasgra glleetyveg asrwhplsgd tlgnvraglv prarlavwpa
      241 lspdvgavfg slpdeglvea vwqdadgrvh raladeedha eltvrmagat aaalmpvyad
      301 eyvplftavl pdsdgvvrar wrteptpddr kwaflkslra gqvvtgtvie tapfgvtfvd
      361 veghvgiini pelswrplah psdvvsvgql ihaqvlgvda vrgrvalslr allddpmkel
      421 taqvgtivlg pvtklvpfgv fvrieereng leglvhnsel tgpqvgdprf gieigralrv
      481 kildvdlerr ritlsqrqad pev
//
LOCUS       WP_236056907             487 aa            linear   BCT 02-MAR-2025
DEFINITION  YHS domain-containing protein [Mycobacterium sp. SM1].
ACCESSION   WP_236056907
VERSION     WP_236056907.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium sp. SM1
  ORGANISM  Mycobacterium sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016811.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04945.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Mycobacterium sp. SM1"
                     /db_xref="taxon:2816243"
     Protein         1..487
                     /product="YHS domain-containing protein"
                     /calculated_mol_wt=55002
     Region          1..471
                     /region_name="Ferritin_like"
                     /note="Ferritin-like superfamily of diiron-containing
                     four-helix-bundle proteins; cl00264"
                     /db_xref="CDD:469698"
     Site            order(89,119,122,182,216,219)
                     /site_type="other"
                     /note="dinuclear metal binding motif [ion binding]"
                     /db_xref="CDD:153097"
ORIGIN      
        1 mnwslryvtp eaafpremsd dfgiplseww awdepykvay reyahnqaek eamvyavnaa
       61 varssliekl dpgwkaaita hygaiampey aitmgesrma rfgraaawrn tatygtldet
      121 rhgqiqaafa ygllpkeprm dwahkllhtn dwgaiavrsf dddiftanda vrtaiqltfa
      181 tetgftnlqf lgmaaeamrv gdvsfgslls siqtdearha qqgeptlkvl langkkaeaq
      241 qlidvafwrn wrlfallagp smdyytples rempfkefcq ewigkqfldq itsfglekpw
      301 ywddhfltdl nwwhhaialg lwywratiwf sphagmssae rqwleqhypg wtslfgqywd
      361 esatairagk adstfsetlp tmcnmcqipv vapagflggy rktpgpltle yggrkyqfcs
      421 epcqwifeqa peryaghlni ldrflagyvq pptmegalqy mgvspeesgq dadgynwaye
      481 sagaaag
//
LOCUS       WP_236057431             189 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase [Mycobacterium sp. SM1].
ACCESSION   WP_236057431
VERSION     WP_236057431.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium sp. SM1
  ORGANISM  Mycobacterium sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 189)
  AUTHORS   Zheng,M., Ginalski,K., Rychlewski,L. and Grishin,N.V.
  TITLE     Protein domain of unknown function DUF1023 is an alpha/beta
            hydrolase
  JOURNAL   Proteins 59 (1), 1-6 (2005)
   PUBMED   15688435
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018018.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06259.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Mycobacterium sp. SM1"
                     /db_xref="taxon:2816243"
     Protein         1..189
                     /product="alpha/beta hydrolase"
                     /calculated_mol_wt=20117
     Region          62..>163
                     /region_name="Abhydrolase_8"
                     /note="Alpha/beta hydrolase; pfam06259"
                     /db_xref="CDD:283837"
ORIGIN      
        1 mssgditaid nanrglldql ereyralpdg qvktdrladi agirsalkvp dshllylarp
       61 ddpsqmipaa vaigdpftad hvsvtvpgvs gttrealatm tkeaaglrqe aqfvawrvge
      121 sqnvstvawt gyqppptlvs gdtsstdlah agalrlesfl anlnsrrttr ttarrcsgtl
      181 tgrwsrgsr
//
LOCUS       WP_236057559             221 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: molybdopterin-dependent oxidoreductase
            [Streptomyces].
ACCESSION   WP_236057559
VERSION     WP_236057559.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
REFERENCE   1  (residues 1 to 221)
  AUTHORS   Kisker,C., Schindelin,H., Pacheco,A., Wehbi,W.A., Garrett,R.M.,
            Rajagopalan,K.V., Enemark,J.H. and Rees,D.C.
  TITLE     Molecular basis of sulfite oxidase deficiency from the structure of
            sulfite oxidase
  JOURNAL   Cell 91 (7), 973-983 (1997)
   PUBMED   9428520
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012401.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00174.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..221
                     /product="molybdopterin-dependent oxidoreductase"
                     /calculated_mol_wt=23607
     Region          41..209
                     /region_name="MsrP"
                     /note="Molybdopterin-dependent catalytic subunit of
                     periplasmic DMSO/TMAO and protein-methionine-sulfoxide
                     reductases [Energy production and conversion]; COG2041"
                     /db_xref="CDD:441644"
ORIGIN      
        1 mlglgaagva aapvlqrale nglgavadkd ptgltgllpn gggfryysvt tsvpertaad
       61 yrltvdgmvd rpatytlasl kalpqtrmvr dvqcvtgwrv petpfegvrl salldaagvr
      121 pgakairftc fdgayseslt ldqarrpdvl vatrmqdkpl ahshggpvrl yvapmyfyks
      181 akwlsgitvt dsvrpgywee lgydvdawvg rsngrddapt a
//
LOCUS       WP_236057786             213 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: PASTA domain-containing protein [Streptomyces].
ACCESSION   WP_236057786
VERSION     WP_236057786.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
REFERENCE   1  (residues 1 to 213)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
REFERENCE   2  (residues 1 to 213)
  AUTHORS   Yeats,C., Finn,R.D. and Bateman,A.
  TITLE     The PASTA domain: a beta-lactam-binding domain
  JOURNAL   Trends Biochem Sci 27 (9), 438 (2002)
   PUBMED   12217513
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015734.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03793.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..213
                     /product="PASTA domain-containing protein"
                     /calculated_mol_wt=21960
     Region          <54..204
                     /region_name="PASTA"
                     /note="PASTA domain, binds beta-lactams [Cell
                     wall/membrane/envelope biogenesis]; COG2815"
                     /db_xref="CDD:442064"
     Region          61..123
                     /region_name="PASTA domain"
                     /note="PASTA domain [structural motif]"
                     /db_xref="CDD:275384"
     Region          144..204
                     /region_name="PASTA domain"
                     /note="PASTA domain [structural motif]"
                     /db_xref="CDD:275384"
ORIGIN      
        1 mknrtitaal acaaavslvs cdpaatdpkp atpaasessa amptatpyee tepaetkavl
       61 nfvgmglqsa qdraqaegfy llkshdsagr drlqaldrnw kvcsqsveag ktvptdteld
      121 fgavkleetc paadakapap aagkmpdlvg ksvkaargal dsgtsvtttd aaedrmvlle
      181 snwqvctqsp apgaeltgqp veftavkfee scp
//
LOCUS       WP_236057906             554 aa            linear   BCT 02-MAR-2025
DEFINITION  IclR family transcriptional regulator domain-containing protein
            [Streptomyces silvae].
ACCESSION   WP_236057906
VERSION     WP_236057906.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces silvae
  ORGANISM  Streptomyces silvae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 554)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
REFERENCE   2  (residues 1 to 554)
  AUTHORS   Galinier,A., Bleicher,F., Negre,D., Perriere,G., Duclos,B.,
            Cozzone,A.J. and Cortay,J.C.
  TITLE     Primary structure of the intergenic region between aceK and iclR in
            the Escherichia coli chromosome
  JOURNAL   Gene 97 (1), 149-150 (1991)
   PUBMED   1995429
REFERENCE   3  (residues 1 to 554)
  AUTHORS   Smith,C.P. and Chater,K.F.
  TITLE     Structure and regulation of controlling sequences for the
            Streptomyces coelicolor glycerol operon
  JOURNAL   J Mol Biol 204 (3), 569-580 (1988)
   PUBMED   3225846
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01614.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Streptomyces silvae"
                     /db_xref="taxon:2803812"
     Protein         1..554
                     /product="IclR family transcriptional regulator
                     domain-containing protein"
                     /calculated_mol_wt=58908
     Region          14..272
                     /region_name="IclR"
                     /note="DNA-binding transcriptional regulator, IclR family
                     [Transcription]; COG1414"
                     /db_xref="CDD:441024"
     Region          295..542
                     /region_name="pcaR_pcaU"
                     /note="beta-ketoadipate pathway transcriptional
                     regulators, PcaR/PcaU/PobR family; TIGR02431"
                     /db_xref="CDD:131484"
ORIGIN      
        1 mpttrtarrg aevpaeavap lmrgiavlrr lteadgslal gdleratgla rstvdrvtlt
       61 lartgyvrid grtvtlaprl melgnaylss vrlpgllgdr adaladelde tvslavpdgg
      121 girfvhqatr rramslrfri gdllpverta pgtlfatlwg agewqawrer rasdpegegf
      181 pslpkrpgpa ddlfeervaa aradgwavdd qliepgllal avpvrdpdgg facvlsvvsh
      241 tsrhtarglr edllprlrda asamerrlrd appagtspse galaswttas kqelgrgfve
      301 slargltvvt afgdggaalt lsavaratgl srasarrall tlehlgyvta egrdhrltpr
      361 vlalgyppls rttlariagp hlsalagriq dsaslavlad dsvqyvaraa thrimdvdit
      421 vgtrfpayat slgrvlladl ppaalaplld haelrplaph tlthrtelea aleracaegy
      481 alvdeeleag lrsiavpvrd ragsavasin vamhsssrti eacleevlpe lrltaghies
      541 elhiaarftq vplm
//
LOCUS       WP_236057981             256 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: phosphotransferase [Streptomyces].
ACCESSION   WP_236057981
VERSION     WP_236057981.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
REFERENCE   1  (residues 1 to 256)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 256)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..256
                     /product="phosphotransferase"
                     /calculated_mol_wt=27717
     Region          <55..194
                     /region_name="SrkA"
                     /note="Ser/Thr protein kinase RdoA involved in Cpx stress
                     response, MazF antagonist [Signal transduction
                     mechanisms]; COG2334"
                     /db_xref="CDD:441905"
ORIGIN      
        1 mthvgtvvrr gdtverpaqp hapvlhahlr alaaagfdaa ptplgvsedg lrerlshvpg
       61 avplppfpsw altdealrsv agmlrrlhra saslpvdrtv pwpteladpe agslpdsali
      121 lchndvcpen vvfregraaa fidfdltapg rplwdvataa rywvrlsged pgaarrlrvl
      181 adgygltaee ragllptieq aaaaarafte rrvrdgspvh lraladrggw erwdrhqawl
      241 aanraalter llrdar
//
LOCUS       WP_236058513            1037 aa            linear   BCT 02-MAR-2025
DEFINITION  ThuA domain-containing protein [Streptomyces silvae].
ACCESSION   WP_236058513
VERSION     WP_236058513.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces silvae
  ORGANISM  Streptomyces silvae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 1037)
  AUTHORS   Ampomah,O.Y., Avetisyan,A., Hansen,E., Svenson,J., Huser,T.,
            Jensen,J.B. and Bhuvaneswari,T.V.
  TITLE     The thuEFGKAB operon of rhizobia and agrobacterium tumefaciens
            codes for transport of trehalose, maltitol, and isomers of sucrose
            and their assimilation through the formation of their 3-keto
            derivatives
  JOURNAL   J Bacteriol 195 (17), 3797-3807 (2013)
   PUBMED   23772075
REFERENCE   2  (residues 1 to 1037)
  AUTHORS   Ampomah,O.Y., Jensen,J.B. and Bhuvaneswari,T.V.
  TITLE     Lack of trehalose catabolism in Sinorhizobium species increases
            their nodulation competitiveness on certain host genotypes
  JOURNAL   New Phytol 179 (2), 495-504 (2008)
   PUBMED   19086182
REFERENCE   3  (residues 1 to 1037)
  AUTHORS   Jensen,J.B., Peters,N.K. and Bhuvaneswari,T.V.
  TITLE     Redundancy in periplasmic binding protein-dependent transport
            systems for trehalose, sucrose, and maltose in Sinorhizobium
            meliloti
  JOURNAL   J Bacteriol 184 (11), 2978-2986 (2002)
   PUBMED   12003938
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018038.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06283.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Streptomyces silvae"
                     /db_xref="taxon:2803812"
     Protein         1..1037
                     /product="ThuA domain-containing protein"
                     /calculated_mol_wt=106820
     Region          28..257
                     /region_name="ThuA"
                     /note="Trehalose utilization; pfam06283"
                     /db_xref="CDD:461867"
     Region          266..661
                     /region_name="YliI"
                     /note="Glucose/arabinose dehydrogenase, beta-propeller
                     fold [Carbohydrate transport and metabolism]; COG2133"
                     /db_xref="CDD:441736"
     Region          690..762
                     /region_name="PKD"
                     /note="Repeats in polycystic kidney disease 1 (PKD1) and
                     other proteins; smart00089"
                     /db_xref="CDD:214510"
     Region          888..1026
                     /region_name="CBM6_xylanase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); many are
                     appended to glycoside hydrolase (GH) family 11 and GH43
                     xylanase domains; cd04084"
                     /db_xref="CDD:271150"
     Site            order(907,917..918,984,1020)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:271150"
ORIGIN      
        1 malvaflali tgsvtaasfp sgpaepfrvl vysggtqasp dtvragvdav rtlgalngfg
       61 veatddptvf dddrlarfha ivfngaapsp qdqdqdqdqe ggreggglda qaraalrtyi
      121 ragggwvglh gaaagahdwd wyeglvgatv dratplqagr vevldhahps tvtlpdlwer
      181 teewynwrtd pagtvhtlag irvrdgiagl degadhpwsw cqdydggrsw ftagggtaqd
      241 frdgaflshl lggiewaaga kpgdctatra gafqrtplaa sgltdpvdva vasdrrvfva
      301 qrtgqlkvvd qrtmkvstal dlayapggag rtdgltglal dpdfaenhwl yllrsesrra
      361 etprsetpha etprpgslps dtprpgtagh llalsrftad gdtvdpasek rlltlpvrrp
      421 aagsgpppsg slafdragrl yvgtggigvp pasgapddaq gsalritpqd dgtytvpagn
      481 lldpgtagar peiyatglra pyrftvdpan gtllaagtga dgaveyvrit eagrvgrpyc
      541 sggtsrgaag caprgngggi tgqvagppvs gpvyaydpan lyrtkfpeyf agkwltydpa
      601 ggrftalsfq rtdqsfsdpr faparagelq svkgvfgdlk wqrpaaaafg pdgalyvvds
      661 gpvsgpgldg gtggaglfrv dhvgdgrlpg aavtadrdng papltvsftg agsglppgvp
      721 vtyawdfdgd gatdsteanp sytyrtagrf tarltvtgpa gttamagqei tvgntrprit
      781 vrrpqdggff rpgealaltv dvadtedgkd tridcsrivv rsqagvagal rpltgspgcr
      841 gsivmaagde asrsgsqrvt vqytdkgapg apelmgstsl ilrpafqeae lftstggahg
      901 gvvtgsrpaa sggralteie dgdwialdpv nlrdirsvtv gatpcgtggt iefragspdg
      961 rllgslavpg aqdaaagrtt agraaavspt aalksrtggm tlyvvftspa wssekpdlft
     1021 vdwlrfdgpg igraaar
//
LOCUS       WP_236058687              72 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Planococcus glaciei].
ACCESSION   WP_236058687
VERSION     WP_236058687.1
KEYWORDS    RefSeq.
SOURCE      Planococcus glaciei
  ORGANISM  Planococcus glaciei
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Planococcus glaciei"
                     /db_xref="taxon:459472"
     Protein         1..72
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=7328
     Region          <34..71
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mqsiqgtsce ilgdrapdts gndinksnas fldtavparr ggkpsevaat ihflasegaa
       61 yingeiihvd gd
//
LOCUS       WP_236058750              66 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Planococcus glaciei].
ACCESSION   WP_236058750
VERSION     WP_236058750.1
KEYWORDS    RefSeq.
SOURCE      Planococcus glaciei
  ORGANISM  Planococcus glaciei
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Planococcus glaciei"
                     /db_xref="taxon:459472"
     Protein         1..66
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=7549
     Region          12..>66
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mdttfkmenq vfnyrvaavw iengyvllhk qtheshwalp ggraqmleds ktclvreike
       61 eldaea
//
LOCUS       WP_236059061             126 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Planococcus glaciei].
ACCESSION   WP_236059061
VERSION     WP_236059061.1
KEYWORDS    RefSeq.
SOURCE      Planococcus glaciei
  ORGANISM  Planococcus glaciei
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00872.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Planococcus glaciei"
                     /db_xref="taxon:459472"
     Protein         <1..126
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <2..124
                     /region_name="Transposase_mut"
                     /note="Transposase, Mutator family; cl27632"
                     /db_xref="CDD:474953"
ORIGIN      
        1 vdklpkkdte afrlqlkrlf mavtvedmra fkedlfttft dqpkfekala tlddgfedti
       61 qymnepvklh phirstnsle rlnqevrrre rvirifpntq safrligavl mqqektqysq
      121 kkgltk
//
LOCUS       WP_236059108             600 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail tip lysozyme [Pseudomonas protegens].
ACCESSION   WP_236059108
VERSION     WP_236059108.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas protegens
  ORGANISM  Pseudomonas protegens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 600)
  AUTHORS   Xiang,Y., Morais,M.C., Cohen,D.N., Bowman,V.D., Anderson,D.L. and
            Rossmann,M.G.
  TITLE     Crystal and cryoEM structural studies of a cell wall degrading
            enzyme in the bacteriophage phi29 tail
  JOURNAL   Proc Natl Acad Sci U S A 105 (28), 9552-9557 (2008)
   PUBMED   18606992
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037025.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18013.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Pseudomonas protegens"
                     /db_xref="taxon:380021"
     Protein         1..600
                     /product="phage tail tip lysozyme"
                     /calculated_mol_wt=62610
     Region          346..476
                     /region_name="Phage_lysozyme2"
                     /note="Phage tail lysozyme; pfam18013"
                     /db_xref="CDD:465617"
ORIGIN      
        1 mkvlesflia lgikvdeksf qkadaafggl tksalqfgav lasklaidkv vgdfknagte
       61 lnnfnrltgl stqnvqalgq alaaqggnaq dafaamqkiq dlmaspitgn vgwfgdvakl
      121 gldpnaiiga qdtaealani agafekmtpl nqrlagqalg fdentirllm kgrdevekql
      181 dsrnklgimt qkqvedaahl tkanaelnlv fsdmgntiag elvpafaela edftafyrdn
      241 kdlvdsglea ffgtlaknie lvsaalvlmg gasalkglaa lraligmgga agaagaagaa
      301 aggaaagasg lavaggsaaa llysgslnag edqellnnrl rkggseaaaa vmdffrakgw
      361 saeqaagiaa nleqesgfrs davgdggnay glaqwhpdrq anfakfsgkd irkssateql
      421 efinheltkg aeksagerlk laasareaag ivsryyerpa dadgevsrrg diadnyglpr
      481 apgstapvvd lrdpeqwakv qadlsksgqq gpsildqida wakkqrrape qytasdvvtp
      541 aasplapaag paapahtsey ndnrqfhihg adtekvkkly neqlstlidq ttqdfrspek
//
LOCUS       WP_236059154             692 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Pseudomonas alliivorans].
ACCESSION   WP_236059154
VERSION     WP_236059154.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas alliivorans
  ORGANISM  Pseudomonas alliivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 692)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 692)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 692)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 692)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Pseudomonas alliivorans"
                     /db_xref="taxon:2810613"
     Protein         1..692
                     /product="ATP-binding protein"
                     /calculated_mol_wt=75859
     Region          57..557
                     /region_name="COG4251"
                     /note="Bacteriophytochrome (light-regulated signal
                     transduction histidine kinase) [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443393"
     Region          <321..692
                     /region_name="PRK13557"
                     /note="histidine kinase; Provisional"
                     /db_xref="CDD:237425"
ORIGIN      
        1 mnqsplghps qwsgclksli atalpvhaqi vlfwgpqfia lyndayapsi gdkhpgalgr
       61 pavenwgelw ddlepllrgv retgktfsak drpfyikrfg aketvyfnvs ysavretdgs
      121 iggvlcivte ttervqferr qaflielgrt lpstsdpcai erhvlsrlre elalqhiali
      181 gidddgahlk tvsadpndss saiphlpewt dsmsadlran ravlheiaas piipantrma
      241 rytvtrppct vyvpvvlhgk leavltiqps itstfgdhel hlaqeaakqa wlwinqarae
      301 ralrdlnesl eqrvvtmlaq rekalaqlhe srkmemvgql sggvahdfnn lltpimasle
      361 lvrrrvedpr stklldsaml aadrartlvg rlltfarrqt lvpeairldg lvaelkdlie
      421 rslgpmivme vdipdslpav fvdphqlela ilnltvnard amddggrvki saraesleak
      481 fgnhvrltvs dngcgmsedt lrhcvepfys tkgvgkgtgl glsmvqglal qsggefdirs
      541 rpgqgtqvsl wlpvasspvi qaesrvletp qlkgsvhvll vddedlvrds tahllqdlgy
      601 qvteapsaav aldlfdaglr pdvlvtdyvm aditgvqlar qvrqrindlp iliitgytna
      661 kpvptddfei lakpfrrqdi asrlaqlvqs gt
//
LOCUS       WP_236059480             313 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Chitinophaga rhizophila].
ACCESSION   WP_236059480
VERSION     WP_236059480.1
KEYWORDS    RefSeq.
SOURCE      Chitinophaga rhizophila
  ORGANISM  Chitinophaga rhizophila
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Chitinophaga.
REFERENCE   1  (residues 1 to 313)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 313)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 313)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 313)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Chitinophaga rhizophila"
                     /db_xref="taxon:2866212"
     Protein         1..313
                     /product="ATP-binding protein"
                     /calculated_mol_wt=35162
     Region          <137..309
                     /region_name="KdpD"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; COG2205"
                     /db_xref="CDD:441807"
ORIGIN      
        1 mkkqmtysee sgtsqslltk seaeyplqvf sklfmkysle silqsikgvf ttsfnvdlqr
       61 iieaghilvs sstapridke cinctyakll lviidmidaq lgiaevamnr lmeehefrff
      121 alrpevacqi stfrlivart rhllqninhk vkfsggdfvl spnmtkfnla ifvdeitapf
      181 klyedatgrv ieirntvkss qnllmdkvml diimsslihv ayahsrksar ifilveaaee
      241 rlsfsvkseg kqmsnseven lfkplngsit lannwganly makkcidvlg gvirvlseky
      301 etvvqaslpc llr
//
LOCUS       WP_236059501            1347 aa            linear   BCT 02-MAR-2025
DEFINITION  PKD domain-containing protein [Chitinophaga rhizophila].
ACCESSION   WP_236059501
VERSION     WP_236059501.1
KEYWORDS    RefSeq.
SOURCE      Chitinophaga rhizophila
  ORGANISM  Chitinophaga rhizophila
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Chitinophaga.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040138.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18911.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Chitinophaga rhizophila"
                     /db_xref="taxon:2866212"
     Protein         1..1347
                     /product="PKD domain-containing protein"
                     /calculated_mol_wt=145266
     Region          125..440
                     /region_name="IgGFc_binding"
                     /note="IgGFc binding protein; pfam17517"
                     /db_xref="CDD:465430"
     Region          659..746
                     /region_name="PKD_4"
                     /note="PKD domain; pfam18911"
                     /db_xref="CDD:436824"
     Region          747..832
                     /region_name="PKD_4"
                     /note="PKD domain; pfam18911"
                     /db_xref="CDD:436824"
     Region          925..1008
                     /region_name="PKD_4"
                     /note="PKD domain; pfam18911"
                     /db_xref="CDD:436824"
     Region          1009..1087
                     /region_name="PKD_4"
                     /note="PKD domain; pfam18911"
                     /db_xref="CDD:436824"
     Region          1098..1177
                     /region_name="PKD"
                     /note="Repeats in polycystic kidney disease 1 (PKD1) and
                     other proteins; smart00089"
                     /db_xref="CDD:214510"
     Region          1262..1345
                     /region_name="CHU_C"
                     /note="CHU_C Type IX secretion signal domain; pfam13585"
                     /db_xref="CDD:404473"
ORIGIN      
        1 mqtygqnlsn kgksfwvgyg hhqfmepgrg ntqemvlyls aeepanvtvt idgttwtrsy
       61 tipantviat dqipktgafd arlysvpptf ggtggeglfq rkgihivsdv pivayahiyg
      121 sassgatmlm peetwgyyyv slnsqqeydf dcfswmfvva renntvveit psvltrnnkq
      181 pgvpftvtln rgeiyqvvga slggsagrem tgttvrsian andtcfpvav fsgssrtsia
      241 csggfgssgd nniqqvfpsq awgkryltap sstsstpssf mtnpykvvvk dpatvvkrng
      301 vqltgllnns yyeyesdtpd yieadkpilv aqymsstgsc pntggdgdpe mvylspveqs
      361 ikrigfyrnn resinvnylt miiptegvnt lsidgvgnsw nyilphpnls gysvvvkrwn
      421 asqaqcivqs dsaftavtyg lgsvesygyn agtlinnlnv igvihnehdt snykndftct
      481 qtpvelsvll ayqptemhwn isklgnlitp nadvtqanps pvgeelvngv pyykytlpgt
      541 ysfstigkye ipiinthpgi ekcdhteevk isvdvkrkpv asfstdftgc tsdtvyfkad
      601 ssgngytidr wkwtypgavq dsgalvkhtf pvgqqqvqld viskegciad tlipvtvvar
      661 pvadfstapt avceggsism tdqstyggta ainnwywdfg nditiavdqd ttqtakyagy
      721 giytvshvvs iselcvsdtv tkqvvvnakp ipgfsypdsc llasgevqft ststvpdgqt
      781 iaaytwkfgd pnatpgnpdt aniadplhsy skfgtytiry tvttaqgctn dttvratfnl
      841 kpaltfgasl pavcvndksv isvarasvtn gvtgtgvykg pgvsqsgvfd plsagagtht
      901 iwyvftaqgg ctdsisapit vypkpqpafa anenvclgdt vrfsdqstit sgtiaawkwy
      961 ygdgstetrt dnavfsknya awkaynaklv avsdhgcssd tatrtinvha lpvpefilpg
     1021 nicmpegaaq ftnqsttpdn avmtyqwafg dggvetavsp lyhyqnagty tvsltatsvy
     1081 gctattakvl daffaqpvad fsvspdtlcq gadnvftdqs ldnnsdivsw awtfgdgsss
     1141 tdrnpvkryt dpgdysvqlv vtngagcvsv pytgnvvvyl qpvidagqsf ivnqgtqirf
     1201 nptandstvl tfrwtppdgl sdptalrpvl ramedqvytl taigegscia tdelsvkvfk
     1261 pvtvpnafsp ngdqindkwv ltnlseyaec vvevfnrygq rvyysegykt pwdgtykgsl
     1321 lpqatyyyvi klkhgfapmt gyvvilq
//
LOCUS       WP_236059554              86 aa            linear   BCT 02-MAR-2025
DEFINITION  glyoxalase superfamily protein [Chitinophaga rhizophila].
ACCESSION   WP_236059554
VERSION     WP_236059554.1
KEYWORDS    RefSeq.
SOURCE      Chitinophaga rhizophila
  ORGANISM  Chitinophaga rhizophila
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Chitinophaga.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040323.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19581.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Chitinophaga rhizophila"
                     /db_xref="taxon:2866212"
     Protein         1..86
                     /product="glyoxalase superfamily protein"
                     /GO_process="GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /calculated_mol_wt=9776
     Region          6..>86
                     /region_name="Glyoxalase_7"
                     /note="Glyoxalase superfamily protein; pfam19581"
                     /db_xref="CDD:437413"
ORIGIN      
        1 maivkpvlra fgyaqviefy vewlgfqvnw ehkpedasfy mqlslgdivl hlsahhgdas
       61 pggklyvdqf egleayhhil idkqyk
//
LOCUS       WP_236059591             483 aa            linear   BCT 02-MAR-2025
DEFINITION  SusD/RagB family nutrient-binding outer membrane lipoprotein
            [Chitinophaga rhizophila].
ACCESSION   WP_236059591
VERSION     WP_236059591.1
KEYWORDS    RefSeq.
SOURCE      Chitinophaga rhizophila
  ORGANISM  Chitinophaga rhizophila
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Chitinophaga.
REFERENCE   1  (residues 1 to 483)
  AUTHORS   Koropatkin,N., Martens,E.C., Gordon,J.I. and Smith,T.J.
  TITLE     Structure of a SusD homologue, BT1043, involved in mucin O-glycan
            utilization in a prominent human gut symbiont
  JOURNAL   Biochemistry 48 (7), 1532-1542 (2009)
   PUBMED   19191477
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024181.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12771.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Chitinophaga rhizophila"
                     /db_xref="taxon:2866212"
     Protein         1..483
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /calculated_mol_wt=54191
     Region          28..448
                     /region_name="SusD-like_2"
                     /note="Starch-binding associating with outer membrane;
                     pfam12771"
                     /db_xref="CDD:463695"
ORIGIN      
        1 mkkilsiaam vlvvatgckk fedfqtdpnk stvstpdlll ntviqqgfqs tslgaalatr
       61 qmvfvnsvsn eqyygwtran fntynnlrqv mkmeaeanrm qkpeylplak ffkaynfmkl
      121 tntfgdvpyf salkgeqdtl spvydrqqdi yldvlnelke anelittntp nvqgdivygg
      181 nmqkwkrlin tlslrilmsl slkennstln vkarfaeivn npsvyplltg nadngqlvff
      241 dvqgsrypty fdndlqtayy ldanfvdllk gmrdprlfrf aekapkfagl pdndfnaygg
      301 akgsdpindn sskvlrgevs kiksryfndp vnepsialgy gelqfilaeg vvrgwitgda
      361 agyyqkgiqa smlfygidqs sidtyllanp lpatdqlkai ltqkyiasfm nsdwtsfyeq
      421 rrtglpafdv sgggvlndkk ipkrwmypes eiqnnltnln aainnqfagn dninsvmwll
      481 kae
//
LOCUS       WP_236059638             249 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Chitinophaga rhizophila].
ACCESSION   WP_236059638
VERSION     WP_236059638.1
KEYWORDS    RefSeq.
SOURCE      Chitinophaga rhizophila
  ORGANISM  Chitinophaga rhizophila
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Chitinophaga.
REFERENCE   1  (residues 1 to 249)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 249)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Chitinophaga rhizophila"
                     /db_xref="taxon:2866212"
     Protein         1..249
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=28158
     Region          2..239
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(92,94,96..97,173..174,194,239)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 mariiplseg aftvdatkkf ipydpqkdnm qqrtggsllv eiqpflvitd qdyilldagl
       61 gyrnedgvlq ihqhlinngv npmditkvlm shlhkdhsgg isvvdpvsgq rslsfphaty
      121 yvnaqemqya ldndgksyla edvrilkerd nvvftegngv idgyityeit gghcpyhqtf
      181 lidtgddkif fggdeapqvs ylkrrfaaky dydgkkgmel reqfkergtr dgwtflyyhd
      241 skvpfgkfq
//
LOCUS       WP_236059650             805 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 N-terminal domain-containing protein
            [Chitinophaga rhizophila].
ACCESSION   WP_236059650
VERSION     WP_236059650.1
KEYWORDS    RefSeq.
SOURCE      Chitinophaga rhizophila
  ORGANISM  Chitinophaga rhizophila
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Chitinophaga.
REFERENCE   1  (residues 1 to 805)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00933.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..805
                     /organism="Chitinophaga rhizophila"
                     /db_xref="taxon:2866212"
     Protein         1..805
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=86748
     Region          12..796
                     /region_name="PRK15098"
                     /note="beta-glucosidase BglX"
                     /db_xref="CDD:185053"
ORIGIN      
        1 mkkfagtrsy vmlciavfgl gtqafgqask tkantiiykn paapvesrvk dllkrmtlee
       61 kagqictllg wemyekngds vgisetfksv mdkrhigsfw atlradpwtk ktlvtglspk
      121 qaaiatnamq rymmentrlg iplllaeecp hghmaigttv fstsigqast wdpaliqema
      181 gaiakearvq gahigygpvl dlvreprwsr leetygedpy lisqmgismv kgfqgnnlrs
      241 gsnvvstlkh ftaygspegg hnggialtgv rdlyssylpp fqaaikagaq simasynsid
      301 gvpcsansfl lkdvlvkqwg frgfsvsdlg gipgvrsthr vaatmeeaaa mainagldad
      361 lggeaygdal ikavnnkkva matldsavah vlrlkfnmgl fenpyvdpaa aekavgtett
      421 kalsrrvaaa sivlmkneqe llplkktikn lavigpnadn iynqlgdyta pqpdekivtv
      481 legikakvsp dtkvtyvkgc airdtahani seavaaaeqa davvivlggs sardfgttfq
      541 stgaaevkas evavsdmesg egydrvsldl mglqnqllqr iaatgkpvvl vliegrplni
      601 nwaaqnvpai inawypgqeg ghavadvlfg dynpagrlpi sipksvgqlp vyynykhasr
      661 hdyvemdakp lysfghglsy akfdyqdlkt nvqasgnnlk vsisfklknt skvagdevaq
      721 lyirddagtv vtavkqlkkf qrihlapgee qqvtfellpd dlrllnidmk wvvepgtfsv
      781 mvgassedir lngsfevkqe vvcky
//
LOCUS       WP_236059654             245 aa            linear   BCT 02-MAR-2025
DEFINITION  GyrI-like domain-containing protein [Chitinophaga rhizophila].
ACCESSION   WP_236059654
VERSION     WP_236059654.1
KEYWORDS    RefSeq.
SOURCE      Chitinophaga rhizophila
  ORGANISM  Chitinophaga rhizophila
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Chitinophaga.
REFERENCE   1  (residues 1 to 245)
  AUTHORS   Anantharaman,V. and Aravind,L.
  TITLE     The SHS2 module is a common structural theme in functionally
            diverse protein groups, like Rpb7p, FtsA, GyrI, and MTH1598/TM1083
            superfamilies
  JOURNAL   Proteins 56 (4), 795-807 (2004)
   PUBMED   15281131
REFERENCE   2  (residues 1 to 245)
  AUTHORS   Romanowski,M.J., Gibney,S.A. and Burley,S.K.
  TITLE     Crystal structure of the Escherichia coli SbmC protein that
            protects cells from the DNA replication inhibitor microcin B17
  JOURNAL   Proteins 47 (3), 403-407 (2002)
   PUBMED   11948793
REFERENCE   3  (residues 1 to 245)
  AUTHORS   Kwon,H.J., Bennik,M.H., Demple,B. and Ellenberger,T.
  TITLE     Crystal structure of the Escherichia coli Rob transcription factor
            in complex with DNA
  JOURNAL   Nat Struct Biol 7 (5), 424-430 (2000)
   PUBMED   10802742
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018184.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06445.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Chitinophaga rhizophila"
                     /db_xref="taxon:2866212"
     Protein         1..245
                     /product="GyrI-like domain-containing protein"
                     /calculated_mol_wt=27736
     Region          49..245
                     /region_name="MA1133"
                     /note="Cyclopropanoid cyclopropyl hydrolase, GyrI-like
                     domain [Defense mechanisms, Signal transduction
                     mechanisms]; COG4832"
                     /db_xref="CDD:443860"
ORIGIN      
        1 mklhlwghwl llivgivhqf tmsdpggiat hkrkrisdtc htklsvmskt dltkvhkely
       61 takaqpalif vpaghyvait gkgdpngqlf adstqalyta aytikqaykq leqdfvvskl
      121 egtwwveqeg ypldvpreew cwqllirmpd yvmrtivqqs ldaaftrkql pllrqvslit
      181 laegksvqil hngpyseepa tlkvmeafit gqgltyngrh heiylsdprk taparmktil
      241 rqpvk
//
LOCUS       WP_236059793             126 aa            linear   BCT 02-MAR-2025
DEFINITION  SRPBCC domain-containing protein [Chitinophaga rhizophila].
ACCESSION   WP_236059793
VERSION     WP_236059793.1
KEYWORDS    RefSeq.
SOURCE      Chitinophaga rhizophila
  ORGANISM  Chitinophaga rhizophila
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Chitinophaga.
REFERENCE   1  (residues 1 to 126)
  AUTHORS   Stark,J.L., Mercier,K.A., Mueller,G.A., Acton,T.B., Xiao,R.,
            Montelione,G.T. and Powers,R.
  TITLE     Solution structure and function of YndB, an AHSA1 protein from
            Bacillus subtilis
  JOURNAL   Proteins 78 (16), 3328-3340 (2010)
   PUBMED   20818668
REFERENCE   2  (residues 1 to 126)
  AUTHORS   Lotz,G.P., Lin,H., Harst,A. and Obermann,W.M.
  TITLE     Aha1 binds to the middle domain of Hsp90, contributes to client
            protein activation, and stimulates the ATPase activity of the
            molecular chaperone
  JOURNAL   J Biol Chem 278 (19), 17228-17235 (2003)
   PUBMED   12604615
REFERENCE   3  (residues 1 to 126)
  AUTHORS   Panaretou,B., Siligardi,G., Meyer,P., Maloney,A., Sullivan,J.K.,
            Singh,S., Millson,S.H., Clarke,P.A., Naaby-Hansen,S., Stein,R.,
            Cramer,R., Mollapour,M., Workman,P., Piper,P.W., Pearl,L.H. and
            Prodromou,C.
  TITLE     Activation of the ATPase activity of hsp90 by the stress-regulated
            cochaperone aha1
  JOURNAL   Mol Cell 10 (6), 1307-1318 (2002)
   PUBMED   12504007
REFERENCE   4  (residues 1 to 126)
  AUTHORS   Sevier,C.S. and Machamer,C.E.
  TITLE     p38: A novel protein that associates with the vesicular stomatitis
            virus glycoprotein
  JOURNAL   Biochem Biophys Res Commun 287 (2), 574-582 (2001)
   PUBMED   11554768
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08327.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Chitinophaga rhizophila"
                     /db_xref="taxon:2866212"
     Protein         1..126
                     /product="SRPBCC domain-containing protein"
                     /calculated_mol_wt=14459
     Region          1..125
                     /region_name="COG5580"
                     /note="Activator of HSP90 ATPase [Posttranslational
                     modification, protein turnover, chaperones]"
                     /db_xref="CDD:444319"
ORIGIN      
        1 mkdykkhfiv pappedlyka ltnpntirlw tgepaemste pgtefalwde sivgmnlefe
       61 edkmivqewy fgeqeepsiv tiklhpnkkg tdvelrhtni pdeayddivg gwndsyfgal
      121 idfyte
//
LOCUS       WP_236059919             140 aa            linear   BCT 02-MAR-2025
DEFINITION  carbohydrate-binding protein [Chitinophaga rhizophila].
ACCESSION   WP_236059919
VERSION     WP_236059919.1
KEYWORDS    RefSeq.
SOURCE      Chitinophaga rhizophila
  ORGANISM  Chitinophaga rhizophila
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Chitinophaga.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015387.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03422.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Chitinophaga rhizophila"
                     /db_xref="taxon:2866212"
     Protein         1..140
                     /product="carbohydrate-binding protein"
                     /GO_function="GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /calculated_mol_wt=15101
     Region          <39..136
                     /region_name="CBM6_xylanase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); many are
                     appended to glycoside hydrolase (GH) family 11 and GH43
                     xylanase domains; cd04084"
                     /db_xref="CDD:271150"
ORIGIN      
        1 mivrgqtagp apstgpaptg atapaapqrk gnfetefkmk sgtylgfgqv nlgmgeigfk
       61 vvvfcqnkek kngrlefrid hpkgkksrri gtlkipftgd ttyalklvgn pkysygihdl
      121 ylvakgnpfs itsitfvqdy
//
LOCUS       WP_236060239             399 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome P450 [Actinacidiphila acididurans].
ACCESSION   WP_236060239
VERSION     WP_236060239.1
KEYWORDS    RefSeq.
SOURCE      Actinacidiphila acididurans
  ORGANISM  Actinacidiphila acididurans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Actinacidiphila.
REFERENCE   1  (residues 1 to 399)
  AUTHORS   Werck-Reichhart,D. and Feyereisen,R.
  TITLE     Cytochromes P450: a success story
  JOURNAL   Genome Biol 1 (6), REVIEWS3003 (2000)
   PUBMED   11178272
REFERENCE   2  (residues 1 to 399)
  AUTHORS   Graham-Lorence,S., Amarneh,B., White,R.E., Peterson,J.A. and
            Simpson,E.R.
  TITLE     A three-dimensional model of aromatase cytochrome P450
  JOURNAL   Protein Sci 4 (6), 1065-1080 (1995)
   PUBMED   7549871
REFERENCE   3  (residues 1 to 399)
  AUTHORS   Degtyarenko,K.N. and Archakov,A.I.
  TITLE     Molecular evolution of P450 superfamily and P450-containing
            monooxygenase systems
  JOURNAL   FEBS Lett 332 (1-2), 1-8 (1993)
   PUBMED   8405421
REFERENCE   4  (residues 1 to 399)
  AUTHORS   Nelson,D.R., Kamataki,T., Waxman,D.J., Guengerich,F.P.,
            Estabrook,R.W., Feyereisen,R., Gonzalez,F.J., Coon,M.J.,
            Gunsalus,I.C., Gotoh,O. et al.
  TITLE     The P450 superfamily: update on new sequences, gene mapping,
            accession numbers, early trivial names of enzymes, and nomenclature
  JOURNAL   DNA Cell Biol 12 (1), 1-51 (1993)
   PUBMED   7678494
REFERENCE   5  (residues 1 to 399)
  AUTHORS   Guengerich,F.P.
  TITLE     Reactions and significance of cytochrome P-450 enzymes
  JOURNAL   J Biol Chem 266 (16), 10019-10022 (1991)
   PUBMED   2037557
REFERENCE   6  (residues 1 to 399)
  AUTHORS   Nebert,D.W. and Gonzalez,F.J.
  TITLE     P450 genes: structure, evolution, and regulation
  JOURNAL   Annu Rev Biochem 56, 945-993 (1987)
   PUBMED   3304150
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00067.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Actinacidiphila acididurans"
                     /db_xref="taxon:2784346"
     Protein         1..399
                     /product="cytochrome P450"
                     /GO_function="GO:0004497 - monooxygenase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=43096
     Region          4..393
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(81,85,92,139,231..232,235..236,239..240,243,276,286,
                     288,311,338..340,344..348,351..352)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(160..161,231,234..235,239,284..287)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
ORIGIN      
        1 mpdpypllar lraagdvhpl pdaatpswvv tghaavraal rdgrlssdpa rgpggtrpdq
       61 dnhvsraafa rsmftsdppe htrlrrtvtr tptwqriadl rpyiertaag ligalplspa
      121 agpadaveal aapltvltic rllglpsrdh hdllrwshel mteqtdaatr aastagrqrl
      181 tgylagfvrd laarhrpgav arssgglvhd lvnappaerl tdqeilttam lllvaghetg
      241 tgltsavvrh llcdpdraaa lrrrplavpa avqevlrydg pvtmtvhrta ltdvriaerv
      301 vpaghhvflc laaanrdera fpdpdtllld rrsnrhlgfg hgvhrcpgss lalletrvlt
      361 elllrtadls lavppdalrw rrgkvrcldr lpvevrarg
//
LOCUS       WP_236060273             854 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5682 family protein [Actinacidiphila acididurans].
ACCESSION   WP_236060273
VERSION     WP_236060273.1
KEYWORDS    RefSeq.
SOURCE      Actinacidiphila acididurans
  ORGANISM  Actinacidiphila acididurans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Actinacidiphila.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040143.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18934.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..854
                     /organism="Actinacidiphila acididurans"
                     /db_xref="taxon:2784346"
     Protein         1..854
                     /product="DUF5682 family protein"
                     /calculated_mol_wt=89373
     Region          21..786
                     /region_name="DUF5682"
                     /note="Family of unknown function (DUF5682); pfam18934"
                     /db_xref="CDD:436841"
ORIGIN      
        1 mtddllllgv rhhgpgsara vraaldayrp qavliegppe adaltalaad pamrppvall
       61 ahvvddpara afwpfaefsp ewvamrwaak agaevrfidl paahslared agppagdgap
      121 daapapgegp vrdggpdpdr apdsgdagpg aapgegpdpa aeavsvridp lavlartagy
      181 ddperwweda vehraegdgd alapfqavae amaairetyg dggypqdlpr eahmrlrire
      241 arkayertav vcgawhvpal atrtaaaadr rllkglpkak vettwvpwth rrlaraggyg
      301 agitspgwyr hlftapdrpv arwmtkvagl lrdedlpvss ahvieavrla dalavmrgrp
      361 laglgettda iravmcdgsd vpltliqdrl vvgdvlgevp pdapavplar dlareqrrlr
      421 lkpealerel eldlrkdtda drsrllhrlr llridwgqpv agrggkgtfr etwrlrwepe
      481 aairvaeagi wgttveaaat araedaavds avlaevtava eqcllaglsg alptvmrvla
      541 draaldadva hlaaalpalv ravrygdvrg tdsaalarva eglaqricvg fppacvglda
      601 daaaamrkhl devhraiall paarpepagt rgpgspesaa svtelrerwa gvlrnlaerd
      661 gsvpgllrga aarllldegr lgageaarlm glalspgtap geaaawiegf lagggmllvh
      721 derllalvdg wltgvsgeaf tdvlpllrrt fadfepgvrr tvgelvrrgp argtrpagta
      781 eaglpgfgpg ldaaraqaaa htvrlllgtt tttdlatatd rtpadgtpga tptepgttdv
      841 apgtpggtdd dgpr
//
LOCUS       WP_236060790             368 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Actinacidiphila
            acididurans].
ACCESSION   WP_236060790
VERSION     WP_236060790.1
KEYWORDS    RefSeq.
SOURCE      Actinacidiphila acididurans
  ORGANISM  Actinacidiphila acididurans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Actinacidiphila.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13407.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Actinacidiphila acididurans"
                     /db_xref="taxon:2784346"
     Protein         1..368
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=37288
     Region          72..325
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mvvavvatag acsksgaggs ssssnstgnv ssssaapaik gditfndtnl akldaalksa
       61 lagkdlsklh eamvvnvavd ywnagkigft kgladlgvkg tyqapangrl dqqlsiiqtl
      121 rgqgitgmsv saidptaika piasansagi pvlaidsplp kedgaalylg tpnyeagqka
      181 geamkqalgg kgqvvvlvgs lttsnaveri qgfedalkgs dvkvvqklsd gmdaskalsn
      241 aqtviqtnqn vnglygvysy dgpsaaqavq aagksgrvkv isddsdpqtl kfiksgaiqa
      301 tvlqqpyqqg ytgayllaal kvlgkdatln ivkpylesdg stlssgvglv tqdnlsdyqa
      361 kltqmglg
//
LOCUS       WP_236060803             544 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Actinacidiphila
            acididurans].
ACCESSION   WP_236060803
VERSION     WP_236060803.1
KEYWORDS    RefSeq.
SOURCE      Actinacidiphila acididurans
  ORGANISM  Actinacidiphila acididurans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Actinacidiphila.
REFERENCE   1  (residues 1 to 544)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 544)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Actinacidiphila acididurans"
                     /db_xref="taxon:2784346"
     Protein         1..544
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=57851
     Region          201..>488
                     /region_name="FabG"
                     /note="NAD(P)-dependent dehydrogenase, short-chain alcohol
                     dehydrogenase family [Lipid transport and metabolism];
                     COG1028"
                     /db_xref="CDD:440651"
     Region          201..>305
                     /region_name="fabG"
                     /note="3-ketoacyl-(acyl-carrier-protein) reductase;
                     Provisional; PRK12825"
                     /db_xref="CDD:237218"
ORIGIN      
        1 mtatvrdldd pgpgkpgaas thipgarepg agpepyadad pyagpysdaa yadadagpdt
       61 gpepyadvag idperlavcl svlaelddlp ldhpdaiavr ratagiyrtv khrrrqerra
      121 aktandkavt eatatgaadr tddetlgial rssvtteiag ilqrprscyi cktryvevda
      181 fyhqlcpsca aenrarrdar tdltgrrall tggrakigmy ialrllrdga httvttrfpn
      241 davrrfkamp dsdqwihrlk ivgidlrdpa qvvaladsva aagpldilin naaqtvrrsp
      301 qayrelvaae daplpagelp grevfgafgs gartaaalps prkeglltaa dvtglalvsg
      361 saslarieag taidagglvp dldatnswvq tvgevdpvel levqlcnvta pfilvsklrp
      421 vmaaaparrk yvvnvsameg qfgrgykgag hphtnmakaa lnmltrtsaq emfqtdrilm
      481 tavdtgwitd erphpdkvrl aaegfhapld lvdgaarvyd pivrgesged lfgcflkdya
      541 pspw
//
LOCUS       WP_236060807             136 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6510 family protein [Actinacidiphila acididurans].
ACCESSION   WP_236060807
VERSION     WP_236060807.1
KEYWORDS    RefSeq.
SOURCE      Actinacidiphila acididurans
  ORGANISM  Actinacidiphila acididurans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Actinacidiphila.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040451.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20120.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Actinacidiphila acididurans"
                     /db_xref="taxon:2784346"
     Protein         1..136
                     /product="DUF6510 family protein"
                     /calculated_mol_wt=13923
     Region          52..133
                     /region_name="DUF6510"
                     /note="Family of unknown function (DUF6510); pfam20120"
                     /db_xref="CDD:437952"
ORIGIN      
        1 msepivpaha vrtanraypa dpaapvapva ptapvdadrp adpyagpyag qyedgnalag
       61 algeifavdt ttaagrctgc gsawplarlh vyahapgfvg rcpdceqvil rlvrspdtvw
      121 ldlrgtvsva fpmngg
//
LOCUS       WP_236060889             135 aa            linear   BCT 02-MAR-2025
DEFINITION  IS4 family transposase [Paraburkholderia domus].
ACCESSION   WP_236060889
VERSION     WP_236060889.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia domus
  ORGANISM  Paraburkholderia domus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 135)
  AUTHORS   Davies,D.R., Mahnke Braam,L., Reznikoff,W.S. and Rayment,I.
  TITLE     The three-dimensional structure of a Tn5 transposase-related
            protein determined to 2.9-A resolution
  JOURNAL   J Biol Chem 274 (17), 11904-11913 (1999)
   PUBMED   10207011
REFERENCE   2  (residues 1 to 135)
  AUTHORS   Johnson,R.C. and Reznikoff,W.S.
  TITLE     DNA sequences at the ends of transposon Tn5 required for
            transposition
  JOURNAL   Nature 304 (5923), 280-282 (1983)
   PUBMED   6306482
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014349.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02281.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Paraburkholderia domus"
                     /db_xref="taxon:2793075"
     Protein         1..135
                     /product="IS4 family transposase"
                     /calculated_mol_wt=15226
     Region          <1..127
                     /region_name="transpos_IS4_3"
                     /note="IS4 family transposase; NF033590"
                     /db_xref="CDD:468099"
ORIGIN      
        1 mrwkietfhk ilksgckaee arlrtadrla nlisvlcils wrifwltmis ravpqappea
       61 vftqteiell drlvqesaht arapplvrnv fklaqlggyl arvgdpppgn tvmwrgmrrl
      121 tdiqlgyela mkrsg
//
LOCUS       WP_236060952             237 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Paraburkholderia domus].
ACCESSION   WP_236060952
VERSION     WP_236060952.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia domus
  ORGANISM  Paraburkholderia domus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 237)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Paraburkholderia domus"
                     /db_xref="taxon:2793075"
     Protein         1..237
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=25805
     Region          23..>79
                     /region_name="PilJ"
                     /note="Type IV pili methyl-accepting chemotaxis transducer
                     N-term; pfam13675"
                     /db_xref="CDD:433397"
     Region          <59..>199
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
ORIGIN      
        1 mstftmkqat hsgpdavsgq vigelinlgg rqrmlsqriv lhvllaslgn sdalsvakac
       61 latfeqahtd lvsgnerlpg vfsealrely fgnrraderi qqfiaqvnra vscvesgrae
      121 drtqldalvm qatpllellq ditlayqhem rgieaaalkr qtdiaerlgr ismqanival
      181 narisaarag qfgrefavit tvladiikem deliksvvdt rgmplqrrha sagralq
//
LOCUS       WP_236060957             325 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Actinacidiphila
            acididurans].
ACCESSION   WP_236060957
VERSION     WP_236060957.1
KEYWORDS    RefSeq.
SOURCE      Actinacidiphila acididurans
  ORGANISM  Actinacidiphila acididurans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Actinacidiphila.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Actinacidiphila acididurans"
                     /db_xref="taxon:2784346"
     Protein         1..325
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=34950
     Region          33..319
                     /region_name="PRK09685"
                     /note="DNA-binding transcriptional activator FeaR;
                     Provisional"
                     /db_xref="CDD:236612"
ORIGIN      
        1 mfrsgelpag erlaaadelf grsvlpmrlv sqadgvfeat vrhvdlasmk vvelaatpaa
       61 mlrtprlirr adpevlsvil slngglvvsq sgretevgrd qlalydsslp frigvatgdg
      121 tttvvsahvp raqmelplag lgrllarplp agrgsgfggl ltqlltdvtg epgdhrpvdl
      181 vrmgsiahdl ltavvahhld aetavpddar hralllrids fvrkqlhdpt lspatiaaah
      241 hisvghlhrl fgprgttvaa wirrqrlera rrdladpalr elpvhriatr wgftghstft
      301 rafraaygta pqdyrhqaaa apghe
//
LOCUS       WP_236061020             628 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2300 domain-containing protein [Paraburkholderia domus].
ACCESSION   WP_236061020
VERSION     WP_236061020.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia domus
  ORGANISM  Paraburkholderia domus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021572.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10062.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Paraburkholderia domus"
                     /db_xref="taxon:2793075"
     Protein         1..628
                     /product="DUF2300 domain-containing protein"
                     /calculated_mol_wt=67190
     Region          106..624
                     /region_name="YfaQ"
                     /note="Uncharacterized conserved protein YfaQ, DUF2300
                     domain [Function unknown]; COG5445"
                     /db_xref="CDD:444196"
ORIGIN      
        1 mfpafsalrh srdrratalr valavgagcv fsgagataat asptaslaat pssspmassk
       61 sapnalprst sttspttpsa assaqtlhfa wlrdgqsqlw qfnaaggatd glapqsarpl
      121 patletplgs vwklfvygyl vdrniatpdy tcsggdpeev yccmagghid rehalvqscg
      181 rffeparlqv dpadwrkywt aahapawlrd lhamtptrrv pvtdllaalq amparpreaa
      241 astlvsvlts grgegtvsly gsvlraktwt mpdparpgas iggaagwlvd gtpvwlggpg
      301 gsarvlaaaa priaplltqv tvpddnacvl vdffsrypir qvlgdkgpaa vpdgplrgef
      361 rigfvngnwa rvesrgelrl drdaagapqv vgrfgmndyv arvveregdt sqpeaakala
      421 vaarsyvvqh gnhdhgcfri ddssstqrvl prvptaaarr aadltdalvl tgvpvqyhhd
      481 raapgqmswl aakvsaqtgl tfdailsrtw pqatltsfes plsgdciqva gaqqwlqrna
      541 plwarrmdga agyetpdlpa vcavregrpy adaqrnrvyv yrlqteedri altheyihla
      601 fqhhprglde efvertartl irtdnpiq
//
LOCUS       WP_236061023             319 aa            linear   BCT 02-MAR-2025
DEFINITION  SGNH/GDSL hydrolase family protein [Paraburkholderia domus].
ACCESSION   WP_236061023
VERSION     WP_236061023.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia domus
  ORGANISM  Paraburkholderia domus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 319)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 319)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00657.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Paraburkholderia domus"
                     /db_xref="taxon:2793075"
     Protein         1..319
                     /product="SGNH/GDSL hydrolase family protein"
                     /GO_function="GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /calculated_mol_wt=33534
     Region          2..309
                     /region_name="COG3240"
                     /note="Phospholipase/lecithinase/hemolysin [Lipid
                     transport and metabolism, General function prediction
                     only]"
                     /db_xref="CDD:442472"
ORIGIN      
        1 mqvvsfgdsl sdvgtyayar qfgggayttn pgaisvqlia ehygsgltpa ltggfgqpsv
       61 vhpegfgyaq ggarvagppn pgdatgdtge lqtpltlqva aylqsharft gqqlvlmqgg
      121 andvqdayga wagmvanggd pgaslqavlp slrqaaqqfa glvhnvqqhg athivvqnvp
      181 diskapianl leqqlpgstk vlrrmaqvfn talddalpss pavlridaft fidevsenyr
      241 qlgfrfdgsi gtnvacvpan lppafqaddt salfcsrsty vspnadtiym fadayhptth
      301 lqkliadyvv vkidtwlhk
//
LOCUS       WP_236060984              63 aa            linear   BCT 02-MAR-2025
DEFINITION  toxin-antitoxin system HicB family antitoxin [Actinacidiphila
            acididurans].
ACCESSION   WP_236060984
VERSION     WP_236060984.1
KEYWORDS    RefSeq.
SOURCE      Actinacidiphila acididurans
  ORGANISM  Actinacidiphila acididurans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Actinacidiphila.
REFERENCE   1  (residues 1 to 63)
  AUTHORS   Mhlanga-Mutangadura,T., Morlin,G., Smith,A.L., Eisenstark,A. and
            Golomb,M.
  TITLE     Evolution of the major pilus gene cluster of Haemophilus influenzae
  JOURNAL   J Bacteriol 180 (17), 4693-4703 (1998)
   PUBMED   9721313
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017355.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05534.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..63
                     /organism="Actinacidiphila acididurans"
                     /db_xref="taxon:2784346"
     Protein         1..63
                     /product="toxin-antitoxin system HicB family antitoxin"
                     /calculated_mol_wt=6379
     Region          1..>42
                     /region_name="DUF6290"
                     /note="Family of unknown function (DUF6290); cl46766"
                     /db_xref="CDD:481106"
ORIGIN      
        1 msvmtlripd dldpsiraga kaagmslnay ivraarrqav ldagqrlaal glgddlageg
       61 dtl
//
LOCUS       WP_236061060             234 aa            linear   BCT 02-MAR-2025
DEFINITION  OmpA family protein [Paraburkholderia domus].
ACCESSION   WP_236061060
VERSION     WP_236061060.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia domus
  ORGANISM  Paraburkholderia domus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012894.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00691.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Paraburkholderia domus"
                     /db_xref="taxon:2793075"
     Protein         1..234
                     /product="OmpA family protein"
                     /calculated_mol_wt=25480
     Region          <100..228
                     /region_name="PRK10808"
                     /note="outer membrane protein A; Reviewed"
                     /db_xref="CDD:236764"
ORIGIN      
        1 mitiglengt plsaanpalr tvstvrpdlw kivntiksdp aiarcpvaqq placaevelm
       61 qaghdawrrs fsaaekrlpe iqdnlrksae talqctqakp eplpaaqppk kitlkadslf
      121 rfaggneaai lpqgkqrldt vvaglkqtqa iaelritgft dllgsdaynq rlslqraqtv
      181 sqylrtrgvn lpiavrgegd anqlvtckqt rrdelvrcla pnrrveiefl raap
//
LOCUS       WP_236061191             307 aa            linear   BCT 02-MAR-2025
DEFINITION  L,D-transpeptidase family protein [Actinacidiphila acididurans].
ACCESSION   WP_236061191
VERSION     WP_236061191.1
KEYWORDS    RefSeq.
SOURCE      Actinacidiphila acididurans
  ORGANISM  Actinacidiphila acididurans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Actinacidiphila.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Biarrotte-Sorin,S., Hugonnet,J.E., Delfosse,V., Mainardi,J.L.,
            Gutmann,L., Arthur,M. and Mayer,C.
  TITLE     Crystal structure of a novel beta-lactam-insensitive peptidoglycan
            transpeptidase
  JOURNAL   J Mol Biol 359 (3), 533-538 (2006)
   PUBMED   16647082
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015679.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03734.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Actinacidiphila acididurans"
                     /db_xref="taxon:2784346"
     Protein         1..307
                     /product="L,D-transpeptidase family protein"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=31864
     Region          120..300
                     /region_name="COG3786"
                     /note="L,D-peptidoglycan transpeptidase YkuD,
                     ErfK/YbiS/YcfS/YnhG family [Cell wall/membrane/envelope
                     biogenesis]"
                     /db_xref="CDD:443000"
ORIGIN      
        1 mtaaalpdkv lteprddddr dggddrevrd eaddpngrgr hrrprrtrrr taafaaagal
       61 glvalgagya vagrhsgdaa sakdaehtpp dqashaasva qpapahtnda lptvipgigp
      121 ktlaaipatt rqvlvasgrs ansslttvtl wsrtddghwk agqawpahna lhgwtrdhqa
      181 gdlhspigvf tlsdaggfes dpgsalpyhh sskfraggvg fdgepldeaf dyviaidynr
      241 vpgtspldgt qplgpsrggg iwvhvdhggp thgcvsisaa hmvqllrtlr padhpvivmg
      301 dsaalat
//
LOCUS       WP_236061197             300 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Paraburkholderia
            domus].
ACCESSION   WP_236061197
VERSION     WP_236061197.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia domus
  ORGANISM  Paraburkholderia domus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 300)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Paraburkholderia domus"
                     /db_xref="taxon:2793075"
     Protein         1..300
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=31456
     Region          4..274
                     /region_name="PRK15092"
                     /note="DNA-binding transcriptional repressor LrhA;
                     Provisional"
                     /db_xref="CDD:237907"
ORIGIN      
        1 mtrdidssll rafvtvaetg avgvaatrla rtqaavsmql rrleeelgqr lldrsprgvq
       61 lteaghlllp fahtilgaga darralsagq vsgtvrlgml ediavgrlpr alrrfsiayp
      121 qvaleivvdt spalsnrlad ggldvvvgdp alvdavpllt wtqplfwvga rgfsrdgdaa
      181 lpvvafggac lwqqqvltal rragiawriv ctstslpavq saveaglgvs vlldgnirse
      241 smrvlgqadg lpdaptadfg lfmrpvsgaq aaavqtlqtf lceelhlglr eseplavpas
//
LOCUS       WP_236061404             109 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1214 domain-containing protein [Paraburkholderia domus].
ACCESSION   WP_236061404
VERSION     WP_236061404.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia domus
  ORGANISM  Paraburkholderia domus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018452.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06742.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Paraburkholderia domus"
                     /db_xref="taxon:2793075"
     Protein         1..109
                     /product="DUF1214 domain-containing protein"
                     /calculated_mol_wt=11653
     Region          <6..107
                     /region_name="COG5361"
                     /note="Uncharacterized conserved protein [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:444136"
ORIGIN      
        1 mddavppggi paqafwsvsl yavdkdgqfl aanpinryqi ssrtpglvvn adgsvdiwlq
       61 aqrpmdaqaa nwlptpadgr hftlfaraye ptgsvltgtf kmppvellp
//
LOCUS       WP_236061407             497 aa            linear   BCT 02-MAR-2025
DEFINITION  alkaline phosphatase family protein [Actinacidiphila acididurans].
ACCESSION   WP_236061407
VERSION     WP_236061407.1
KEYWORDS    RefSeq.
SOURCE      Actinacidiphila acididurans
  ORGANISM  Actinacidiphila acididurans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Actinacidiphila.
REFERENCE   1  (residues 1 to 497)
  AUTHORS   Wimalasekera,R., Pejchar,P., Holk,A., Martinec,J. and Scherer,G.F.
  TITLE     Plant phosphatidylcholine-hydrolyzing phospholipases C NPC3 and
            NPC4 with roles in root development and brassinolide signaling in
            Arabidopsis thaliana
  JOURNAL   Mol Plant 3 (3), 610-625 (2010)
   PUBMED   20507939
REFERENCE   2  (residues 1 to 497)
  AUTHORS   Saleh,M.T. and Belisle,J.T.
  TITLE     Secretion of an acid phosphatase (SapM) by Mycobacterium
            tuberculosis that is similar to eukaryotic acid phosphatases
  JOURNAL   J Bacteriol 182 (23), 6850-6853 (2000)
   PUBMED   11073936
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016101.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04185.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Actinacidiphila acididurans"
                     /db_xref="taxon:2784346"
     Protein         1..497
                     /product="alkaline phosphatase family protein"
                     /GO_function="GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /calculated_mol_wt=53389
     Region          15..>494
                     /region_name="PC_PLC"
                     /note="phospholipase C, phosphocholine-specific,
                     Pseudomonas-type; TIGR03396"
                     /db_xref="CDD:274561"
ORIGIN      
        1 mtgntgarpe sagmtrrrml gaaasvagla aavdvlptnv rkalatplpt trrlsdikhv
       61 vmllqenrsf dhyfgtlsgv rgfddpqavr lpggrsvfqq pdpthpdgyr lpyrlntris
      121 aaqaipsldh twggehavln ggtndnwmpa rresdganad yvmgyftred ipfqyalada
      181 fticdayhcs vlgptwpnry mwiagthdaq gqyggpslet ggvpnghftf ttyperltea
      241 gvswkiyrna stntgvapfk alaaynqaka gdplfdqgmt ntpvgqfeyd amndqlptvs
      301 wilppaasde hpahlpaaga qfiagkidai aanpevwakt vfivaydend glfdhvvppt
      361 ppagtpgefv tgtspsgvdg gglpsglgfr vpcvivspwt aggwvcsetf dhtsqlrfle
      421 kitgvaepni sawrrsttgd ltsafrfneg qtqppvlpdt agaynlaqfe ttqlpmptpp
      481 gkqemphqep gnrprvp
//
LOCUS       WP_236061429             408 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5947 family protein [Actinacidiphila acididurans].
ACCESSION   WP_236061429
VERSION     WP_236061429.1
KEYWORDS    RefSeq.
SOURCE      Actinacidiphila acididurans
  ORGANISM  Actinacidiphila acididurans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Actinacidiphila.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040271.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19372.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Actinacidiphila acididurans"
                     /db_xref="taxon:2784346"
     Protein         1..408
                     /product="DUF5947 family protein"
                     /calculated_mol_wt=40709
     Region          <8..164
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          213..395
                     /region_name="DUF5947"
                     /note="Family of unknown function (DUF5947); pfam19372"
                     /db_xref="CDD:466058"
ORIGIN      
        1 mtdagpsaaq ddpaepgprp asdgsagrga teerpddses dpaepaprsa agdsategqa
       61 gghpasgdpv pggstaqesa pdrpsnagpr tygraqpetp paaggaarrp iggppdstdt
      121 sptthgraqp etppaeggaa rrpigappdg tdtgptthgp aqpgpppaag gaargaapgr
      181 asdvtpatcs phasgagsal rgldggrpdv gercelctga vgvehrhlvd leqrvlacac
      241 gacatlfdre gacggrfrtv peryvgdpqw rpapeagkal aaldvrggla ffvrrcgagq
      301 vlavrpgpag pvesevepgl wqaafagaap arllvddvea lllwsdtgra rcalvpldaa
      361 fallaalrpl wrepdggpaa rarvtaflad ldrravpvpa tarwgtpa
//
LOCUS       WP_236061503             366 aa            linear   BCT 02-MAR-2025
DEFINITION  GSU2403 family nucleotidyltransferase fold protein
            [Paraburkholderia domus].
ACCESSION   WP_236061503
VERSION     WP_236061503.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia domus
  ORGANISM  Paraburkholderia domus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 366)
  AUTHORS   Kuchta,K., Knizewski,L., Wyrwicz,L.S., Rychlewski,L. and
            Ginalski,K.
  TITLE     Comprehensive classification of nucleotidyltransferase fold
            proteins: identification of novel families and their
            representatives in human
  JOURNAL   Nucleic Acids Res 37 (22), 7701-7714 (2009)
   PUBMED   19833706
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023701.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12281.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Paraburkholderia domus"
                     /db_xref="taxon:2793075"
     Protein         1..366
                     /product="GSU2403 family nucleotidyltransferase fold
                     protein"
                     /calculated_mol_wt=39941
     Region          42..329
                     /region_name="NTP_transf_8"
                     /note="Nucleotidyltransferase; cl02233"
                     /db_xref="CDD:470500"
ORIGIN      
        1 mkslfsvkyk kllknpmppf plyeqqeqay csqfanieqa aatqdkvlmg apgtviehkr
       61 ggviyyarqy mgpegkkqee slggpkgdpe vdrrvedvqh ridlskdlis rirdlgklgf
      121 qladnktyat vgvlynyglf eagavlvgsh ayavilntlg ikavsyeted idiarrhqla
      181 lvnlpeggll amlketginf vpvpsmkrge astsfteagk srfhvdllvp shddsfptvp
      241 vaelnahatg lpylayllgr sqtgtlvsrh gavpvrvpda arfaihkllv srlrtntlvk
      301 sqkdvrqasv llamlgehrt gdiedacadl prsaralvrr tlpevealml daheagfeel
      361 atslaa
//
LOCUS       WP_236061508             263 aa            linear   BCT 02-MAR-2025
DEFINITION  ferritin-like fold-containing protein [Actinacidiphila
            acididurans].
ACCESSION   WP_236061508
VERSION     WP_236061508.1
KEYWORDS    RefSeq.
SOURCE      Actinacidiphila acididurans
  ORGANISM  Actinacidiphila acididurans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Actinacidiphila.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025166.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13794.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Actinacidiphila acididurans"
                     /db_xref="taxon:2784346"
     Protein         1..263
                     /product="ferritin-like fold-containing protein"
                     /calculated_mol_wt=27917
     Region          47..231
                     /region_name="Ferritin_like"
                     /note="Ferritin-like superfamily of diiron-containing
                     four-helix-bundle proteins; cl00264"
                     /db_xref="CDD:469698"
ORIGIN      
        1 metpetpdpt svpesagdra pkpgkaadea pvtgiaaqdw atasadphyr aavvdllgal
       61 aygelaafer laedaklapt ledkaelaam aaaefhhfer lrdrlaeige apnkamlpfk
      121 aalddfhrqt apsdwleglv kayvgdsias dfyrevaarl dtdtrtlvla vlddtghasf
      181 avekvraaia aeprvggrla lwarrlmgea lsqaqrvvad rdalstmlvg gvadgfdlae
      241 vgrmfsrite ahtkrmaalg laa
//
LOCUS       WP_236061598             530 aa            linear   BCT 02-MAR-2025
DEFINITION  tannase/feruloyl esterase family alpha/beta hydrolase
            [Paraburkholderia domus].
ACCESSION   WP_236061598
VERSION     WP_236061598.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia domus
  ORGANISM  Paraburkholderia domus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 530)
  AUTHORS   de Vries,R.P., vanKuyk,P.A., Kester,H.C. and Visser,J.
  TITLE     The Aspergillus niger faeB gene encodes a second feruloyl esterase
            involved in pectin and xylan degradation and is specifically
            induced in the presence of aromatic compounds
  JOURNAL   Biochem J 363 (Pt 2), 377-386 (2002)
   PUBMED   11931668
REFERENCE   2  (residues 1 to 530)
  AUTHORS   Hatamoto,O., Watarai,T., Kikuchi,M., Mizusawa,K. and Sekine,H.
  TITLE     Cloning and sequencing of the gene encoding tannase and a
            structural study of the tannase subunit from Aspergillus oryzae
  JOURNAL   Gene 175 (1-2), 215-221 (1996)
   PUBMED   8917102
  REMARK    Erratum:[Gene 1997 Feb 20;186(1):153]
REFERENCE   3  (residues 1 to 530)
  AUTHORS   Kroon,P.A., Faulds,C.B. and Williamson,G.
  TITLE     Purification and characterization of a novel esterase induced by
            growth of Aspergillus niger on sugar-beet pulp
  JOURNAL   Biotechnol Appl Biochem 23 (3), 255-262 (1996)
   PUBMED   8679110
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019157.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07519.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Paraburkholderia domus"
                     /db_xref="taxon:2793075"
     Protein         1..530
                     /product="tannase/feruloyl esterase family alpha/beta
                     hydrolase"
                     /calculated_mol_wt=56491
     Region          61..528
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 msasdafaap kedplamhca efagavlppe lialptagvq iesaamvaat apgnqqggey
       61 critgrikal kastpdirfd lnlprrwngr alqiggggyn gvvvsgtgvm pfspdrapla
      121 qgyatfgdds ghvgdsslav fglvdeavtn fgyahlkkth daalaliara ygrppqrmyf
      181 aggstggreg ytvmqrypdd ydgvianspa lnftgvrlmg vkigqaefat pggfipplll
      241 ehvvqrtlai cdrldgaadg iisdvagcre heaeiiaslr cagrapshde cltdaqlstl
      301 lamrdglslp ytlawgvtgy rgynvfqgth lsgmlglahq perlpvptff angylfaqgd
      361 gyiryfvtrd aefdslrfdp lhpgkyraql valsqtigam npdlaryiar ggklitlqgl
      421 adevispnqt idyyealidr fgidqvdafm rlymvpgfqh gsgvfipsvd llgaldnwvt
      481 rgvapetlta tdiaaatngr srplcryplf pryggkgnvn lassfacaep
//
LOCUS       WP_236061613             342 aa            linear   BCT 02-MAR-2025
DEFINITION  carbohydrate porin [Klebsiella pneumoniae].
ACCESSION   WP_236061613
VERSION     WP_236061613.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 342)
  AUTHORS   Schirmer,T., Keller,T.A., Wang,Y.F. and Rosenbusch,J.P.
  TITLE     Structural basis for sugar translocation through maltoporin
            channels at 3.1 A resolution
  JOURNAL   Science 267 (5197), 512-514 (1995)
   PUBMED   7824948
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02264.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..342
                     /product="carbohydrate porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /GO_process="GO:0034219 - carbohydrate transmembrane
                     transport [Evidence IEA]"
                     /calculated_mol_wt=37736
     Region          <104..>315
                     /region_name="LamB"
                     /note="Maltoporin (phage lambda and maltose receptor)
                     [Carbohydrate transport and metabolism]; COG4580"
                     /db_xref="CDD:443637"
ORIGIN      
        1 mnpriiisgv iscflpatlc haanlsddgs fqlngygmva gdfqselnrp knmslhtdpt
       61 gpnqdprgkm gdlgnsfwhd ywtslaitkk wqglaspeqw adytyemvgy gdktvetaqn
      121 ygrfgglsfl peganiwagr ryldqrinif ayntkevhid sglgynsknf dlnigtdqid
      181 wssdtapqai egsrrivdma yridqtelgm tyvkeiddpl gtgkqkaisf sakysmpsfw
      241 gvakgqstvk lqygkgviap ylntsritvl seegdcsmrf stdgnltlfd dfavspafiy
      301 eytkrektad rttfipdtgy sggdmtygsa netgiftgvn vk
//
LOCUS       WP_236061619             104 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Paraburkholderia
            domus].
ACCESSION   WP_236061619
VERSION     WP_236061619.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia domus
  ORGANISM  Paraburkholderia domus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 104)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 104)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Paraburkholderia domus"
                     /db_xref="taxon:2793075"
     Protein         1..104
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=10774
     Region          <1..104
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mssgvgslta nsdpafayra ifgpvypask talnaltvam aielesegik vnavspgftk
       61 tnlngyagte tveqgareav rvallgpdgp tgkftrwene tipw
//
LOCUS       WP_236061772              59 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Paraburkholderia
            domus].
ACCESSION   WP_236061772
VERSION     WP_236061772.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia domus
  ORGANISM  Paraburkholderia domus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024908.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13518.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..59
                     /organism="Paraburkholderia domus"
                     /db_xref="taxon:2793075"
     Protein         1..59
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=6590
     Region          8..>41
                     /region_name="transpos_ISNCY_2"
                     /note="ISNCY family transposase; NF033594"
                     /db_xref="CDD:468103"
ORIGIN      
        1 mhelervkii eavlqrrlti vlaaerlqlc erqvsrlvrr ydaagpageg aaaarhqyh
//
LOCUS       WP_236061810              44 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GTP-binding protein, partial [Betaproteobacteria].
ACCESSION   WP_236061810
VERSION     WP_236061810.1
KEYWORDS    RefSeq.
SOURCE      Betaproteobacteria (b-proteobacteria)
  ORGANISM  Betaproteobacteria
            Bacteria; Pseudomonadati; Pseudomonadota.
REFERENCE   1  (residues 1 to 44)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..44
                     /organism="Betaproteobacteria"
                     /db_xref="taxon:28216"
     Protein         1..>44
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>44
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 makgkfertk phvnvgtigh vdhgkttlta aittvltkkf ggea
//
LOCUS       WP_236061818             548 aa            linear   BCT 02-MAR-2025
DEFINITION  SpoIIE family protein phosphatase [Actinacidiphila acididurans].
ACCESSION   WP_236061818
VERSION     WP_236061818.1
KEYWORDS    RefSeq.
SOURCE      Actinacidiphila acididurans
  ORGANISM  Actinacidiphila acididurans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Actinacidiphila.
REFERENCE   1  (residues 1 to 548)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Actinacidiphila acididurans"
                     /db_xref="taxon:2784346"
     Protein         1..548
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=58504
     Region          23..100
                     /region_name="HATPase_RsbW-like"
                     /note="Histidine kinase-like ATPase domain of RsbW, an
                     anti sigma-B factor and serine-protein kinase involved in
                     regulating sigma-B during stress in Bacilli, and related
                     domains; cd16936"
                     /db_xref="CDD:340413"
     Site            order(27,31,34,54,56,58,60..61,72..75,87,89,93..94,96)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340413"
     Site            31
                     /site_type="other"
                     /note="Mg binding site [ion binding]"
                     /db_xref="CDD:340413"
     Region          102..546
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
ORIGIN      
        1 mrstlaawaa pcfgervvdd gtlliselvt navvhagtsv dvvcrldagl vievsdhhpa
       61 rvvredrgde ggrglhlvaa lsdewgityr rdrktvwcri dldheeeeta vvpprrapea
      121 qllapalvpa rsrsdaewis rgsasflaea sdllagqlde dnvaslaaql lvprladwsa
      181 vwlhptggvp rlsrvwhcse aridalhtal ekappepttr pgarrtdwpa aedapdeegg
      241 altvpliaag rchgtlllgr agqeglsddl ihfvedfgrr valalstarq yarqamistv
      301 lqrgllppat gripgvehav iyeplagdwv ggdfydlfpa gdgrwcfalg dvcgngpeaa
      361 sltgiarpvl rllaregygv sdvldrlnka ladeaatali getaawdggp prflsllyge
      421 ivpyapgyga rctlasaghp lplalrpdga vrtaaapqml lgisdnaryt sesfdlapgd
      481 tllcvtdgvt errrgrrqfd dddglaavlr gcaglsaekv aerirqavyd yddapptddl
      541 allvlraq
//
LOCUS       WP_236061948             512 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding protein [Actinacidiphila acididurans].
ACCESSION   WP_236061948
VERSION     WP_236061948.1
KEYWORDS    RefSeq.
SOURCE      Actinacidiphila acididurans
  ORGANISM  Actinacidiphila acididurans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Actinacidiphila.
REFERENCE   1  (residues 1 to 512)
  AUTHORS   Mattevi,A., Fraaije,M.W., Mozzarelli,A., Olivi,L., Coda,A. and van
            Berkel,W.J.
  TITLE     Crystal structures and inhibitor binding in the octameric
            flavoenzyme vanillyl-alcohol oxidase: the shape of the active-site
            cavity controls substrate specificity
  JOURNAL   Structure 5 (7), 907-920 (1997)
   PUBMED   9261083
REFERENCE   2  (residues 1 to 512)
  AUTHORS   Benson,T.E., Walsh,C.T. and Hogle,J.M.
  TITLE     The structure of the substrate-free form of MurB, an essential
            enzyme for the synthesis of bacterial cell walls
  JOURNAL   Structure 4 (1), 47-54 (1996)
   PUBMED   8805513
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013714.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01565.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Actinacidiphila acididurans"
                     /db_xref="taxon:2784346"
     Protein         1..512
                     /product="FAD-binding protein"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=53237
     Region          58..510
                     /region_name="PLN02441"
                     /note="cytokinin dehydrogenase"
                     /db_xref="CDD:215242"
ORIGIN      
        1 mpdrhrlpqp lnrrtalhgl aagaaviafd plartwvtaa ghpapatgrt ttggpfadvp
       61 pldgtlvtdp aalaadaddf ghsvhrtpaa ilrpgsvadv vtmirfcndq giqvaargqg
      121 hatngqaqvd gglivetatl naigpvraqq gagtgtvtvq agavwsavvh atlaqgltpp
      181 vftdylelsv ggtlsvgglg gqthlygaqv dnvtqlqvvt gagelltcsa trrpdlfrav
      241 laglgqcavi vsatlrlvta pvtvrhfllp ytdlatfldd qrllaeddrf ayvegevvpd
      301 aagaftgyvl eavaygppag pepddtalla glrydtsgav taetldyfdf lnrlaagvaa
      361 leqaglwswa hpwlnlllpg dsaatlartl ldgiagqdtg pggvvliypl vsdrlrtpll
      421 rmpadpvpyl lavlwtmdpa dqaavqaraa anaaayetvr vaggtqypvg tiamspadwr
      481 aqygrswpef aaakqrydpn rllapgqhvf tp
//
LOCUS       WP_236062072             634 aa            linear   BCT 02-MAR-2025
DEFINITION  LamG-like jellyroll fold domain-containing protein [Actinacidiphila
            acididurans].
ACCESSION   WP_236062072
VERSION     WP_236062072.1
KEYWORDS    RefSeq.
SOURCE      Actinacidiphila acididurans
  ORGANISM  Actinacidiphila acididurans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Actinacidiphila.
REFERENCE   1  (residues 1 to 634)
  AUTHORS   Thompson,D., Pepys,M.B. and Wood,S.P.
  TITLE     The physiological structure of human C-reactive protein and its
            complex with phosphocholine
  JOURNAL   Structure 7 (2), 169-177 (1999)
   PUBMED   10368284
REFERENCE   2  (residues 1 to 634)
  AUTHORS   Beckmann,G., Hanke,J., Bork,P. and Reich,J.G.
  TITLE     Merging extracellular domains: fold prediction for laminin G-like
            and amino-terminal thrombospondin-like modules based on homology to
            pentraxins
  JOURNAL   J Mol Biol 275 (5), 725-730 (1998)
   PUBMED   9480764
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024777.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13385.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Actinacidiphila acididurans"
                     /db_xref="taxon:2784346"
     Protein         1..634
                     /product="LamG-like jellyroll fold domain-containing
                     protein"
                     /calculated_mol_wt=68384
     Region          75..334
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Site            order(82,84,121,154..155,240,279)
                     /site_type="active"
                     /db_xref="CDD:277344"
     Site            order(82,84,121,154,240,279)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277344"
     Region          <553..630
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
ORIGIN      
        1 mctsphhgat apgmtapgts rrsllvgagl mgaaaaglat aspasaaape taapasaalp
       61 elhgpwrpdt edqrftlvvm pdtqymfdgd aihpapieas fryllanaed dnivfmahlg
      121 dltqngqage faaigeaftv ldthqvpysv lagnhdinsg kddqrgpspy ldvfgpqrfr
      181 gassfggasp dgyntwhsfr aagrewlvla ldwrpsaagi awarkvvadh ptspviltth
      241 eivgannygd eaqlsdfgqq lwdelidgsd qifltlnghf wppartvktn aaghdthlhi
      301 tnyqdryygg aamirlyrfd larntidvdt ispwilgqaa dslnelqrqe ieltgpqdrf
      361 sldidfterf sgfapvaprp grpvgrmlip gtvaywrfdg shdtdrvqdl tgrgndlvkq
      421 alpgaadsal twsdqyhpdq pghaslyfgg dkdgsgphga ylrtvdsapl naatfaagyt
      481 fetylklpad wdgnrnawsa ilsrwgmsge agktggdpqe pvvtlslsgg aelqwcvypv
      541 dlttsvtnwg hllplnawwh vavvndgrht tmyvdgcpvv rnpatvnhgl tslggpwllg
      601 gyeyngkidq imhgfigdvr itdralspre fmna
//
LOCUS       WP_236062305             349 aa            linear   BCT 02-MAR-2025
DEFINITION  acyltransferase domain-containing protein [Actinacidiphila
            acididurans].
ACCESSION   WP_236062305
VERSION     WP_236062305.1
KEYWORDS    RefSeq.
SOURCE      Actinacidiphila acididurans
  ORGANISM  Actinacidiphila acididurans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Actinacidiphila.
REFERENCE   1  (residues 1 to 349)
  AUTHORS   Lyu,S.Y., Liu,Y.C., Chang,C.Y., Huang,C.J., Chiu,Y.H., Huang,C.M.,
            Hsu,N.S., Lin,K.H., Wu,C.J., Tsai,M.D. and Li,T.L.
  TITLE     Multiple complexes of long aliphatic N-acyltransferases lead to
            synthesis of 2,6-diacylated/2-acyl-substituted glycopeptide
            antibiotics, effectively killing vancomycin-resistant enterococcus
  JOURNAL   J Am Chem Soc 136 (31), 10989-10995 (2014)
   PUBMED   25095906
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037719.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18082.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Actinacidiphila acididurans"
                     /db_xref="taxon:2784346"
     Protein         1..349
                     /product="acyltransferase domain-containing protein"
                     /calculated_mol_wt=37569
     Region          52..187
                     /region_name="NAT_N"
                     /note="N-acyltransferase N-terminal domain; pfam18082"
                     /db_xref="CDD:465640"
     Region          189..347
                     /region_name="GNAT_C"
                     /note="GNAT-like C-terminal domain; pfam18164"
                     /db_xref="CDD:436322"
ORIGIN      
        1 meslrpssdd agllaagpta qvlladpgta gwvrelmaae lpradvrlph gealaevlld
       61 lavahedinp vvgareqlga dpvlaeller cvrtfvrdmg vvgggpqlgp rlpalpsgtg
      121 paghwfallv faatvrhtla fhlrrgipae vsrrtfadvg rqcavhyrrh gtpgivntsw
      181 ltrhfrgvly hlgrlqyert rlggrtgrav aeaggpagpg dlslnvhipd fsgpltpvac
      241 desveraraf farhfsdgph tvatchswll dpqlaerlpa gsnivrfqrr frllpvgeap
      301 dddaplrfvf gtsdrplsdl prvtalqrav tdhlmsgghw yggtgwfal
//
LOCUS       WP_236062309             575 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Actinacidiphila
            acididurans].
ACCESSION   WP_236062309
VERSION     WP_236062309.1
KEYWORDS    RefSeq.
SOURCE      Actinacidiphila acididurans
  ORGANISM  Actinacidiphila acididurans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Actinacidiphila.
REFERENCE   1  (residues 1 to 575)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Actinacidiphila acididurans"
                     /db_xref="taxon:2784346"
     Protein         <1..575
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..105
                     /region_name="entF"
                     /note="enterobactin non-ribosomal peptide synthetase EntF;
                     PRK10252"
                     /db_xref="CDD:236668"
     Region          158..571
                     /region_name="E-C_NRPS"
                     /note="Dual Epimerization/Condensation (E/C) domains of
                     nonribosomal peptide synthetases (NRPSs); cd19544"
                     /db_xref="CDD:380466"
ORIGIN      
        1 mvpsafvvld alpvtvngkl drkalpvper pagggrgpvt vreeilcavf aevlgldavg
       61 vddsffdlgg hsllavtlve rlrergvyvd vrtlfteptp arlaavegva tvevppclip
      121 egaevitsem vplsglttgq latvaaavpg gaaniadvyp laplqegllf hhhldngagp
      181 hpyvlelvlr fdredlarrf lecwqrvidr hdilrtsfaw rdlphpvqvv hrravlpvyd
      241 vdlgpgpaeg aeerllatpm apidphtapl mngslavvpg tesrlvllrv dhlvvdhmay
      301 aafldeaitl mdgtgqplap ptpnrafiaq allgvpreeh erffaemlgd vteptapfgv
      361 ldvrqdgtdv teaevragav ladrlreqar rlgvspatil hvvwarvlav takrddvvfg
      421 tvvlgrmnag agadrasgvf intlpvrart rgvglraair amgrtladlm vhehagpqla
      481 qrasgiaapt plftslfnyr hsvppagtpv egvrivasre rsnyplsvsi ddygpgsehg
      541 fgivvlaaap idpatiaamv rtvteavvta lekqv
//
LOCUS       WP_236062330             357 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Actinacidiphila acididurans].
ACCESSION   WP_236062330
VERSION     WP_236062330.1
KEYWORDS    RefSeq.
SOURCE      Actinacidiphila acididurans
  ORGANISM  Actinacidiphila acididurans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Actinacidiphila.
REFERENCE   1  (residues 1 to 357)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 357)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Actinacidiphila acididurans"
                     /db_xref="taxon:2784346"
     Protein         1..357
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=37959
     Region          165..356
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(180,194..195,284,286,305,341)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:271180"
     Site            order(194,305,308,331,341)
                     /site_type="active"
                     /db_xref="CDD:271180"
ORIGIN      
        1 mgreiavrtp eraelearwa qrhgiemagr ladaedfada vaeaivpent ddtyskgwrv
       61 werfcaaqdf pvtegsrgal vafvawmlre grqtpgpggv lgyapssags hltaavvglr
      121 erghevskda aaearkaldg ltvkllkake rrgrgkapag tieglrtiaa acddtltgrr
      181 dlalvllsfh vagrasepag llagditvhp qglrvdiltg ktkqsvrnpa vpyakdpalc
      241 pvlawqqwra alhaarpdln spsdpafhai drwgrvggvm spdavtaava risvrsgvpl
      301 rwtghslrsg latesrkagr davaiarqgg wapnsrpmlg ymrtvddwed nasagla
//
LOCUS       WP_236062382             400 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase family 39 protein [Actinacidiphila
            acididurans].
ACCESSION   WP_236062382
VERSION     WP_236062382.1
KEYWORDS    RefSeq.
SOURCE      Actinacidiphila acididurans
  ORGANISM  Actinacidiphila acididurans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Actinacidiphila.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024629.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13231.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Actinacidiphila acididurans"
                     /db_xref="taxon:2784346"
     Protein         1..400
                     /product="glycosyltransferase family 39 protein"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=42942
     Region          69..>193
                     /region_name="COG5542"
                     /note="Mannosyltransferase related to Gpi18 [Carbohydrate
                     transport and metabolism]"
                     /db_xref="CDD:444286"
ORIGIN      
        1 mftadpvpss pppaatpprv gtadwagawr rarpavlafa aarlagiavl tlwahrrhth
       61 prdilglewd alwyhriaew gygtfipswe apglryddla ffplypmavr vlaavlpigs
      121 vtcalllswv callaawgvf avteraygrr tatavvvlwa llphaivlsm aytepmmtaf
      181 aawalyatmt rrwlaagllg alaglsrpng vavcaavvaa vladawhrrr tgrpqqaaaw
      241 aaaaiaplgw cgyvlwvgfq tgeplrgyfd vqsrwgsdfd fghyalhyvk hlvlspdnls
      301 aymatalcag avlllamalm drmplpllvy savlvvialg ganffsckpr fllpafplla
      361 pcagalarar prttalavvt lagislgygt yvlaivnqpl
//
LOCUS       WP_236062577             356 aa            linear   BCT 02-MAR-2025
DEFINITION  Hpt domain-containing protein [Paraburkholderia nemoris].
ACCESSION   WP_236062577
VERSION     WP_236062577.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia nemoris
  ORGANISM  Paraburkholderia nemoris
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 356)
  AUTHORS   Porter,S.W., Xu,Q. and West,A.H.
  TITLE     Ssk1p response regulator binding surface on histidine-containing
            phosphotransfer protein Ypd1p
  JOURNAL   Eukaryot Cell 2 (1), 27-33 (2003)
   PUBMED   12582120
REFERENCE   2  (residues 1 to 356)
  AUTHORS   Kato,M., Mizuno,T., Shimizu,T. and Hakoshima,T.
  TITLE     Insights into multistep phosphorelay from the crystal structure of
            the C-terminal HPt domain of ArcB
  JOURNAL   Cell 88 (5), 717-723 (1997)
   PUBMED   9054511
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013767.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01627.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Paraburkholderia nemoris"
                     /db_xref="taxon:2793076"
     Protein         1..356
                     /product="Hpt domain-containing protein"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=38125
     Region          <1..211
                     /region_name="BaeS"
                     /note="Signal transduction histidine kinase [Signal
                     transduction mechanisms]; COG0642"
                     /db_xref="CDD:440407"
     Region          266..347
                     /region_name="Hpt"
                     /note="Hpt domain; pfam01627"
                     /db_xref="CDD:426352"
ORIGIN      
        1 mtavtglles lgtaaapsaq raqalvirsa mrtwaqtlhd lldisplesr aivldesvtn
       61 previdgvia llapaaaqrg lhpsvsvdqt vatliladsa rlgqiffhll nrtvqlntlg
      121 eiavvvqadl lnagsqrisi klmdtgsdav hvaqqplfep sgdlafagew ranldaclsl
      181 cqilaqrmqg ellvasdsks strvsfsapf svekwgpsae ltsnaqaplf aiaaqsrdva
      241 tstssepfer ryldalseeg inlhtflsaw rrsmtddler lsglhrqhdv delrtllhrl
      301 sgavglvgag sltealrras tapehetgai dllvergrtl vtqldaaidp hrstir
//
LOCUS       WP_236062582             122 aa            linear   BCT 02-MAR-2025
DEFINITION  glutathione S-transferase N-terminal domain-containing protein
            [Paraburkholderia nemoris].
ACCESSION   WP_236062582
VERSION     WP_236062582.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia nemoris
  ORGANISM  Paraburkholderia nemoris
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024809.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13417.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Paraburkholderia nemoris"
                     /db_xref="taxon:2793076"
     Protein         1..122
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /GO_process="GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=13823
     Region          6..80
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 mqttevvnly gaawsvyvri arlaleekqi nyrlvevdvf aengvpqehl krhpfgript
       61 fehgdfhlye tgaivryidd afpgcrlqpt didllvatlr hprqhvpdkp vsscarrata
      121 rs
//
LOCUS       WP_236062629            1105 aa            linear   BCT 02-MAR-2025
DEFINITION  adenylate/guanylate cyclase domain-containing protein
            [Paraburkholderia nemoris].
ACCESSION   WP_236062629
VERSION     WP_236062629.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia nemoris
  ORGANISM  Paraburkholderia nemoris
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00211.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1105
                     /organism="Paraburkholderia nemoris"
                     /db_xref="taxon:2793076"
     Protein         1..1105
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /GO_process="GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA]"
                     /GO_process="GO:0035556 - intracellular signal
                     transduction [Evidence IEA]"
                     /calculated_mol_wt=119034
     Region          6..63
                     /region_name="SAM_superfamily"
                     /note="SAM (Sterile alpha motif); cl15755"
                     /db_xref="CDD:472832"
     Region          37..1104
                     /region_name="COG3899"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443106"
     Region          90..264
                     /region_name="CHD"
                     /note="cyclase homology domain; cd07302"
                     /db_xref="CDD:143636"
     Site            order(95,97..102,137,139..141,144,207..209,213..214,
                     217..218,253)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(97,141)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(102,114,117..118,121,125,137..138,194,197,208..211,
                     214,253)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
ORIGIN      
        1 mfvhapdwaa amdidqwlha lgleqyapaf agndidlaml aqlddadlke lgvlslghrk
       61 rllaaiaeqr gaavcaaapa vnapaserrq vtilfadlcg ftalsqtldp eelreltgry
      121 talvdgivlg yggtidkhig davmaifgap rahdtdplra araaleihea lnalgeqgap
      181 plrahvgias gevvagpler advqdytvlg dsvnlaarlv aaagpgetll sdsvhralgd
      241 gvmsdavgam rfkgidspvq vwrlrglpfe pvmasrsvfv grkaeleqfk gvartcleqr
      301 aghvvyvrge agigktrlvd emrrfvetlg fgghrglvld fgvgkgqdpi rtivgsllgl
      361 ppaagsderr aaaerfaasg avgpdqlmfl hdlldlaqtg ewrtlynamd ntartrgkrt
      421 vaaaiaqdac rrgptmivve dlhwadpqvl gylaafavai angpgllvmt srvdgdplda
      481 awragcrgtp fatidlgplr rdealnlags fidaseriar acieraggnp lfleqllhna
      541 eegseeavpa tiqslvlarm drltardrea fqaaavigqr fglallrrli dapeyvchgl
      601 vanalvlpeg edflfahali qesaystllr arrrelhrla adwfaatdpv lraqhldrae
      661 deraprayld aalaqraayf adaalrlver glqiaqtdkd rhalicfrge lqrdlgdiaa
      721 sietyraava aapdeaslcq sqlglaeglr vseglveala lldaaqhvaq rldqvpelar
      781 lhhlrgnilf plgkiddcct eherglgyar rlgapeaear alggladaay aqgrmrtafe
      841 hfsrcvalsr ehgfgrieva nrsmagfsri ylnearlahe dvsaaaraaa lvgqpraqml
      901 cetlgvfasy elgdmqatla hleretliir qlgarrfeaq nmemrarvll atdhrreata
      961 llrealalcr evgtqfsapk avgalsrave ddgerarlla egadmldrga vghnhlwfyr
     1021 daieamisag dsagalryva alegytraep lpwadlfvar grvlaralqd ysgeetqrel
     1081 ervraalvea gfnsylpavd aalap
//
LOCUS       WP_236062777             852 aa            linear   BCT 02-MAR-2025
DEFINITION  oligosaccharide flippase family protein [Paraburkholderia nemoris].
ACCESSION   WP_236062777
VERSION     WP_236062777.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia nemoris
  ORGANISM  Paraburkholderia nemoris
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024832.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13440.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Paraburkholderia nemoris"
                     /db_xref="taxon:2793076"
     Protein         1..852
                     /product="oligosaccharide flippase family protein"
                     /calculated_mol_wt=92075
     Region          7..398
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
     Region          472..833
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mmrfgessvt wvfaqqavsr llvafkffll arllgpqsig liaaclmals iaesltemgm
       61 shaliqrrel ldqrgldalw tatalrglll tvvlfaasgl iarlmnipeg tavlqmvalv
      121 plarciasvr vvvaqrerrf rtvalltssf vvvdfvmsav aaltyrdvfw vlaalplsef
      181 lkaiasyivf ktkprlnfdt kplgevmefg rwvwassllt vvvnqldrii tvkafgvqtl
      241 glyqtasrla qfgvadfgia msqylfpnfs elarrdksra ahyalalfsq lgtialvvat
      301 flcvaardii qlalggqwsg avpffrifvy lmaagvlvgl ltsylrgtgr psrvtratvv
      361 qlacllassa vlvpwlgpig vafaatisvf vcaalmlwdv vsddreqirq llplatvgvp
      421 vtalivilaq vfssfpyhav glgfvcaval vlplqrlrag isltvrrenv mrimhvvltp
      481 rhsgaemlaa tlaevhtsek ngvagvmgin pceaafrpvw skleekgvwc asparllgrl
      541 grlrfiratl refrpdviva hsvipaayar lamklttsai pvvtvmhaat nddyaggllr
      601 lserilkgda aavvtvteta annyrsrcga prrlltipng tdldrfafde narcrlraef
      661 evddsvsvvl qvgrlspvkn qaasvlalnd mllagqsvel wlagltedps ygdalkrlve
      721 qhglsgkvrf lgsrpdvaal lcaadvyvmp sgreahsvam iealasgvpi vasaipvfef
      781 atrfsgvvtv dpashrdyaa sitkvlaqak irqqrdlsay siervaerya alfgdvtsrp
      841 rfgtgtaqeg at
//
LOCUS       WP_236062696             230 aa            linear   BCT 02-MAR-2025
DEFINITION  AroM family protein [Streptomyces poriferorum].
ACCESSION   WP_236062696
VERSION     WP_236062696.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces poriferorum
  ORGANISM  Streptomyces poriferorum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 230)
  AUTHORS   DeFeyter,R.C., Davidson,B.E. and Pittard,J.
  TITLE     Nucleotide sequence of the transcription unit containing the aroL
            and aroM genes from Escherichia coli K-12
  JOURNAL   J Bacteriol 165 (1), 233-239 (1986)
   PUBMED   3001025
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018952.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07302.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Streptomyces poriferorum"
                     /db_xref="taxon:2798799"
     Protein         1..230
                     /product="AroM family protein"
                     /calculated_mol_wt=24203
     Region          6..229
                     /region_name="Asp_Glu_race"
                     /note="Asp/Glu/Hydantoin racemase; cl00518"
                     /db_xref="CDD:444951"
ORIGIN      
        1 mrravhtvtf ltigqaprpd lsdaieahlp atarirhagv ldgltrrete lrfgategra
       61 tllsrladgs pvtldadtvg aalqsridqv eeagadvvvl lctgefpglr trrarlvepd
      121 alvtgyvgtv lrgsrvgfvv plpeqvtear ekwrtvvpdp afttaspyad neaallaaac
      181 thleagadal mldcmgyger hrrslraagl tvpiltpgal vgaalgplld
//
LOCUS       WP_236062918             176 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: nuclear transport factor 2 family protein
            [Streptomyces].
ACCESSION   WP_236062918
VERSION     WP_236062918.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024966.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13577.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..176
                     /product="nuclear transport factor 2 family protein"
                     /calculated_mol_wt=18193
ORIGIN      
        1 marvrmtrnp lvaaaivltv aaagaagwgg vsryqaahdd saayaqvrdd alaageqavq
       61 nmntldheql akgldsweds ttgdlhqqlv dgrdgfvkqi qeaktvstak vlsgavteld
      121 dragkagvmv alrvtvtapk gkpavkesrm lgqltrtsdg wklsalgqap vgntag
//
LOCUS       WP_236062941             430 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Streptomyces poriferorum].
ACCESSION   WP_236062941
VERSION     WP_236062941.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces poriferorum
  ORGANISM  Streptomyces poriferorum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Streptomyces poriferorum"
                     /db_xref="taxon:2798799"
     Protein         1..430
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=43230
     Region          26..379
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(28..29,32..33,36,69,121..122,124..126,129,149,
                     152..153,156,224,227..228,231..233,236,264,268,323..324,
                     328,332,348,351..352,355..356,359)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 matttklqpr alvrasggpr yavalavdal gtgllrpfll lygvtvlrls apatgiamtv
       61 gvvvglvcmp avghwldrga rstvvaasml vrvlgvalll atpagdvrlf aaaalflgig
      121 nqawpaahaa lvatlahgre rdaalaagra lrnaglgtga llataclagg ttalqalaav
      181 tglaylaaaa lawsvhvhar paaataeerd dgppprmrvl laanviyvfc lnvpeialpl
      241 vlvtqlhasp mwsaaifvan tvlvvtlqvp vtvlmsrfpr rcvlalsgvv laasylgfla
      301 atslglgwsa pavaavsvvc tigeiiyags avalvtalap arvlgrtlar fqlstgfgla
      361 vspaaitala phgpaalwgs laaatllsas avatekdrgg aqrpepadar rlarpaaayg
      421 agtkerpass
//
LOCUS       WP_236063066             203 aa            linear   BCT 02-MAR-2025
DEFINITION  Fic family protein [Streptomyces poriferorum].
ACCESSION   WP_236063066
VERSION     WP_236063066.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces poriferorum
  ORGANISM  Streptomyces poriferorum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 203)
  AUTHORS   Garcia-Pino,A., Christensen-Dalsgaard,M., Wyns,L., Yarmolinsky,M.,
            Magnuson,R.D., Gerdes,K. and Loris,R.
  TITLE     Doc of prophage P1 is inhibited by its antitoxin partner Phd
            through fold complementation
  JOURNAL   J Biol Chem 283 (45), 30821-30827 (2008)
   PUBMED   18757857
REFERENCE   2  (residues 1 to 203)
  AUTHORS   Lehnherr,H., Maguin,E., Jafri,S. and Yarmolinsky,M.B.
  TITLE     Plasmid addiction genes of bacteriophage P1: doc, which causes cell
            death on curing of prophage, and phd, which prevents host death
            when prophage is retained
  JOURNAL   J Mol Biol 233 (3), 414-428 (1993)
   PUBMED   8411153
REFERENCE   3  (residues 1 to 203)
  AUTHORS   Komano,T., Utsumi,R. and Kawamukai,M.
  TITLE     Functional analysis of the fic gene involved in regulation of cell
            division
  JOURNAL   Res Microbiol 142 (2-3), 269-277 (1991)
   PUBMED   1656497
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014691.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02661.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Streptomyces poriferorum"
                     /db_xref="taxon:2798799"
     Protein         1..203
                     /product="Fic family protein"
                     /calculated_mol_wt=22545
ORIGIN      
        1 mtatdslsaw lrvrrevdwq hapalrrilp drdgfrswce gpvrrrdpir agrllaahtl
       61 aredaaresp ldfallagwq revlaapeap frvsdayaka grerygltsh tqddfdcclr
      121 gttdqdlpla araarayldv affhpftdgn araalltlvh vlaredivlp evgplqtiry
      181 addpagaadl atligmlnrl hrr
//
LOCUS       WP_236063091              35 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6131 family protein [Streptomyces].
ACCESSION   WP_236063091
VERSION     WP_236063091.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040003.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19626.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..35
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..35
                     /product="DUF6131 family protein"
                     /calculated_mol_wt=3553
ORIGIN      
        1 msllttiggv lvvvgavlwi lgasgrkvgg rrhyf
//
LOCUS       WP_236063500             197 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Streptomyces
            poriferorum].
ACCESSION   WP_236063500
VERSION     WP_236063500.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces poriferorum
  ORGANISM  Streptomyces poriferorum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 197)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 197)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Streptomyces poriferorum"
                     /db_xref="taxon:2798799"
     Protein         1..197
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=21536
     Region          6..>165
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(15,60,89)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238872"
ORIGIN      
        1 mhindddtll figdsitdag rdrvdatslg ngyvneiaqt lrerthdgpa prvinrging
       61 nrvydlesrw aadviahrpt vvtvkigind twrlhdsgla spadefeacl drlladtarq
      121 lsvrlvvitp fllpvtpdqe swfedlaprt davlraatgn gaqivradlv lpraaqrrpr
      181 pgswpgtaft rplwatg
//
LOCUS       WP_236063394             562 aa            linear   BCT 02-MAR-2025
DEFINITION  AIPR family protein [Klebsiella sp. CVUAS 11332].
ACCESSION   WP_236063394
VERSION     WP_236063394.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella sp. CVUAS 11332
  ORGANISM  Klebsiella sp. CVUAS 11332
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (residues 1 to 562)
  AUTHORS   Iyer,L.M., Abhiman,S. and Aravind,L.
  TITLE     MutL homologs in restriction-modification systems and the origin of
            eukaryotic MORC ATPases
  JOURNAL   Biol Direct 3, 8 (2008)
   PUBMED   18346280
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022062.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10592.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Klebsiella sp. CVUAS 11332"
                     /db_xref="taxon:2020690"
     Protein         1..562
                     /product="AIPR family protein"
                     /calculated_mol_wt=63743
     Region          <43..>79
                     /region_name="PoNe"
                     /note="Polymorphic Nuclease effector (PoNe) domain is a
                     deoxyribonuclease; cl41756"
                     /db_xref="CDD:425387"
     Region          229..>382
                     /region_name="AIPR"
                     /note="AIPR protein; pfam10592"
                     /db_xref="CDD:431380"
ORIGIN      
        1 mkdinsvgeh rketlitrcv aahaislygd epdpelaana vcdgkddggi davyvnknsr
       61 kivivqskyi kngdgsittr efgrfkdaca kvissdfttf nkrflrnkds iieaisgfty
      121 kcicvfaytg vhnpseevks diefwekvqn rsllfkdien rdeysvlfep agiqvimdgl
      181 ssdrsksinv snvhlesyge iaepykaiyg tisarilydw wekykyslfe knirsvlgns
      241 sinygikktl sekpenfwyy nngitavysd veesminlst srkyglfsfk slsiingaqt
      301 vstigevfns lpeekkdlik vnirfisaak edfltsvtkf nntqnrvtgr dfssqrpeqq
      361 riqreinfig gysykllrqe dssptggnti diddalnalv caskdetlis slklnrgrff
      421 eswgglyekv fpaengptgl eiinkvnayr landilqesi vrllsvdmen qkqihqimih
      481 gnyvlisilm nkievssvdn hiisysrnve ledcielasd tynyiqkrfp nsyiarffqn
      541 rekvlniinh llgkddsies pe
//
LOCUS       WP_236063735             286 aa            linear   BCT 02-MAR-2025
DEFINITION  TIM barrel protein [Streptomyces poriferorum].
ACCESSION   WP_236063735
VERSION     WP_236063735.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces poriferorum
  ORGANISM  Streptomyces poriferorum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 286)
  AUTHORS   Fry,J., Wood,M. and Poole,P.S.
  TITLE     Investigation of myo-inositol catabolism in Rhizobium leguminosarum
            bv. viciae and its effect on nodulation competitiveness
  JOURNAL   Mol Plant Microbe Interact 14 (8), 1016-1025 (2001)
   PUBMED   11497462
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013429.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01261.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Streptomyces poriferorum"
                     /db_xref="taxon:2798799"
     Protein         1..286
                     /product="TIM barrel protein"
                     /calculated_mol_wt=29484
     Region          2..257
                     /region_name="VpdB_C"
                     /note="C-terminal fragment of effector protein VpdB;
                     cl30226"
                     /db_xref="CDD:421976"
ORIGIN      
        1 mirvagapis wgvcevpgwg hqmapgrvla emaaaglaat efgpdgflpq dpdaraella
       61 ghglaavggf vpvvlhdpgr dplpevrhal agfgsartlv laaatgtdgy darpelsare
      121 wdallanldr iaaharaegv tatlhphigt mvegpdever vlngsavplc ldtghllagg
      181 ndpvdlarra adriahvhlk dvdaslaarv ragdvtytea vrtglyqplg qgdvdisait
      241 taldaagytg wyvleqdtvl dsepapgegp ladvvaslah lrkvts
//
LOCUS       WP_236062649            1246 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6079 family protein [Paraburkholderia nemoris].
ACCESSION   WP_236062649
VERSION     WP_236062649.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia nemoris
  ORGANISM  Paraburkholderia nemoris
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039983.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19557.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1246
                     /organism="Paraburkholderia nemoris"
                     /db_xref="taxon:2793076"
     Protein         1..1246
                     /product="DUF6079 family protein"
                     /calculated_mol_wt=140289
     Region          5..1246
                     /region_name="DUF6079"
                     /note="Family of unknown function (DUF6079); pfam19557"
                     /db_xref="CDD:437389"
ORIGIN      
        1 maknmkygdl iqfeqiesvi qlldagrpde akklvatyvi sddmaerisk lmvpqlsfde
       61 svdhkgvliv gnygtgkshl msvlslvaed aayapmirhp kvaeavtpia grfkvlriev
      121 gglqmplrqi itlqlerfle kigvdytfpt adkelnnkds feemmsafge kfpgqgvllv
      181 vdefleylqs rrdhelvqdl ailrqigevt khlkfrfvag vqeaifdsvr fqhvadsmrr
      241 vnerftqvli drqdvsfvvs arllkktadq qnkireyltp fakfygsmne rmdeyvrlfp
      301 vhpdylktfe qihftekrga lktieaamla ivdqevpadk pfficyesfw ntikantvlr
      361 adpnikevmr vsevlesrvq qaftrpayka malrvvnala vhrlttggdi hvpigptaae
      421 lrdalclfqp gvedmpgdpa enllsmvqtv lrevlktvng qfiskapdte qyyldlkkdi
      481 dydaqiekra ealsadaldr ayysaikalm ecsddlrypg fqiwqyqiew qerrvermgy
      541 lffgapndrp taqperdfyi yfiqpfdkpk fsdanladev ffrlkspded ykrylsqyaa
      601 aldlastasg gakaiylska qeslrsmskw lqekqmtafe vtyqgktktl qdwskgvslr
      661 drarlgpder infrdvvniv sglalgqrfa dispeyptfs vlvteanrrq lvgnalrala
      721 gstrtkdaaa ildalelldg dridpansry aqevlnrlka kghgqvlnrs ellsgtsdve
      781 yfvpikyrle pdllvtilsg lvysgdivls itgdkidsgk lvqlaersld elkqfkhvea
      841 pkeinlavlr alfelfdlps glaqkasqgd tepviklqek vsalvprvlk agsdlqqgkl
      901 gfwgqnllre eeakdwharl dslkkftesl apyntvgklk nlrvtqedid sqkknleila
      961 averllelvm elgstasyls qaemvlpaeh pwvkqaedar kalldklshd rtaehaseyr
     1021 qtlnqlkkdy itayiashsk arlgvvedkt rnalrkddrl lalrvlagvs lmptsqltaf
     1081 eeslnglksc ssldeptlvt aavcphcqfr psaeqlelip aanrlhkldd dldelvanwq
     1141 qtllenledp ftqdslgllp paskklidaf ltsrklpdpm ttefanavqe alsglekiav
     1201 sgdeikqall qggspatpdd lrkrfdifmn erckgkdatk lrfvie
//
LOCUS       WP_236063966             425 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: flavin reductase [Streptomyces].
ACCESSION   WP_236063966
VERSION     WP_236063966.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
REFERENCE   1  (residues 1 to 425)
  AUTHORS   Parry,R.J. and Li,W.
  TITLE     An NADPH:FAD oxidoreductase from the valanimycin producer,
            Streptomyces viridifaciens. Cloning, analysis, and overexpression
  JOURNAL   J Biol Chem 272 (37), 23303-23311 (1997)
   PUBMED   9287340
REFERENCE   2  (residues 1 to 425)
  AUTHORS   Blanc,V., Lagneaux,D., Didier,P., Gil,P., Lacroix,P. and Crouzet,J.
  TITLE     Cloning and analysis of structural genes from Streptomyces
            pristinaespiralis encoding enzymes involved in the conversion of
            pristinamycin IIB to pristinamycin IIA (PIIA): PIIA synthase and
            NADH:riboflavin 5'-phosphate oxidoreductase
  JOURNAL   J Bacteriol 177 (18), 5206-5214 (1995)
   PUBMED   7665509
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013756.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01613.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..425
                     /product="flavin reductase"
                     /GO_function="GO:0010181 - FMN binding [Evidence IEA]"
                     /calculated_mol_wt=44508
     Region          14..158
                     /region_name="Flavin_Reduct"
                     /note="Flavin reductase like domain; smart00903"
                     /db_xref="CDD:214900"
     Region          <291..396
                     /region_name="TIM-like beta/alpha barrel domains"
                     /note="A large family of domains similar to triose
                     phosphate isomerase (TIM) which, in general, share an
                     eight beta/alpha closed barrel structure; cl21457"
                     /db_xref="CDD:473867"
ORIGIN      
        1 mraavdestf rqtlarwpsg vaivttegal grhgmtassf cslsldpplv lvcmdrrirs
       61 hqlieehgvf avsvlgrdhi dlgrrfagme pgvkdrfeda gwetrvtgsp vltdaaawvd
      121 ckvrhaypgg dhtifvgevv darvprlvsp llfhsrawgq iadplpdavt vadvgsavql
      181 alrasprrpt arlldalsra gvrvrlpagq avgardaedc alpvsvlvpg pdaaaaaaas
      241 gvtaveftva erpgapgirl advpallsaa agsvtvvgri pdalnpsrap rvldlvaalr
      301 sagcdeiale eaadtggeas pdqssplhlr lllqdavqla ggiplrlclr ddhglglvna
      361 ltamksgvrh fdtalagcdg tldterllll csrmgvgvpv esgplaecrt elnrlvrrgr
      421 prrpa
//
LOCUS       WP_236064232              85 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase [Streptomyces poriferorum].
ACCESSION   WP_236064232
VERSION     WP_236064232.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces poriferorum
  ORGANISM  Streptomyces poriferorum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 85)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 85)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Streptomyces poriferorum"
                     /db_xref="taxon:2798799"
     Protein         1..85
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=9114
     Region          6..>74
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
ORIGIN      
        1 mqyrafgrra glrvseyalg tanfgtgwga gaepdearri fdrfaeaggt fldsadgyrf
       61 geseeltgkl issewsarpi vsccp
//
LOCUS       WP_236064333             224 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: response regulator [Streptomyces].
ACCESSION   WP_236064333
VERSION     WP_236064333.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..224
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=24574
     Region          9..213
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mnarpeliri laaddhtllr talaellnae ddlqvvaqas sgrglvelve rhqphvvlld
       61 vempdhhpra avrgllerfp slriiiltmy ddqplvhell qlgargylhk svsraallsa
      121 vrnaareddq itilvprsgy taggdqahdq eagpvsprer evltcvaeam snrqiaarlg
      181 itegtvkrhl rnifdkldav sridavnkal aqkliaaprg rsmr
//
LOCUS       WP_236064471             280 aa            linear   BCT 02-MAR-2025
DEFINITION  heparin lyase I family protein [Streptomyces poriferorum].
ACCESSION   WP_236064471
VERSION     WP_236064471.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces poriferorum
  ORGANISM  Streptomyces poriferorum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 280)
  AUTHORS   Han,Y.H., Garron,M.L., Kim,H.Y., Kim,W.S., Zhang,Z., Ryu,K.S.,
            Shaya,D., Xiao,Z., Cheong,C., Kim,Y.S., Linhardt,R.J., Jeon,Y.H.
            and Cygler,M.
  TITLE     Structural snapshots of heparin depolymerization by heparin lyase I
  JOURNAL   J Biol Chem 284 (49), 34019-34027 (2009)
   PUBMED   19801541
REFERENCE   2  (residues 1 to 280)
  AUTHORS   Konno,N., Ishida,T., Igarashi,K., Fushinobu,S., Habu,N.,
            Samejima,M. and Isogai,A.
  TITLE     Crystal structure of polysaccharide lyase family 20
            endo-beta-1,4-glucuronan lyase from the filamentous fungus
            Trichoderma reesei
  JOURNAL   FEBS Lett 583 (8), 1323-1326 (2009)
   PUBMED   19306878
REFERENCE   3  (residues 1 to 280)
  AUTHORS   Konno,N., Igarashi,K., Habu,N., Samejima,M. and Isogai,A.
  TITLE     Cloning of the Trichoderma reesei cDNA encoding a glucuronan lyase
            belonging to a novel polysaccharide lyase family
  JOURNAL   Appl Environ Microbiol 75 (1), 101-107 (2009)
   PUBMED   18978091
REFERENCE   4  (residues 1 to 280)
  AUTHORS   Ernst,S., Venkataraman,G., Winkler,S., Godavarti,R., Langer,R.,
            Cooney,C.L. and Sasisekharan,R.
  TITLE     Expression in Escherichia coli, purification and characterization
            of heparinase I from Flavobacterium heparinum
  JOURNAL   Biochem J 315 (Pt 2) (Pt 2), 589-597 (1996)
   PUBMED   8615834
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025464.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14099.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Streptomyces poriferorum"
                     /db_xref="taxon:2798799"
     Protein         1..280
                     /product="heparin lyase I family protein"
                     /calculated_mol_wt=29901
     Region          63..275
                     /region_name="Alginate_lyase2"
                     /note="Alginate lyase; cl21738"
                     /db_xref="CDD:451375"
ORIGIN      
        1 mmkvlkvsta lcagallvtl plshaagaep dgsplagsap aqspaeklkv dyengalnsg
       61 veglttthat apdasgvvrp ghggayavqh kvtlgdagye sngaprsesa tdllpsgqfd
      121 vgdvqryefs vllkdwktya agdsdtgdiv fqgkyaggnv pafylmakrn eiafrsphln
      181 qqaavvpdlr pyvnkwmsfr vdarwttdet gyfkvsvqlp gesgykpaas yenvrtyqpd
      241 npadhgyikw glyrpsesig ngdvptrivq hddirildls
//
LOCUS       WP_236064601             140 aa            linear   BCT 02-MAR-2025
DEFINITION  ASCH domain-containing protein [Streptomyces poriferorum].
ACCESSION   WP_236064601
VERSION     WP_236064601.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces poriferorum
  ORGANISM  Streptomyces poriferorum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 140)
  AUTHORS   Iyer,L.M., Burroughs,A.M. and Aravind,L.
  TITLE     The ASCH superfamily: novel domains with a fold related to the PUA
            domain and a potential role in RNA metabolism
  JOURNAL   Bioinformatics 22 (3), 257-263 (2006)
   PUBMED   16322048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016178.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04266.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Streptomyces poriferorum"
                     /db_xref="taxon:2798799"
     Protein         1..140
                     /product="ASCH domain-containing protein"
                     /calculated_mol_wt=15615
     Region          14..128
                     /region_name="ASCH"
                     /note="ASC-1 homology or ASCH domain, a small beta-barrel
                     domain found in all three kingdoms of life. ASCH resembles
                     the RNA-binding PUA domain and may also interact with RNA.
                     ASCH has been proposed to function as an RNA-binding
                     domain during coactivation; cl01020"
                     /db_xref="CDD:445230"
ORIGIN      
        1 mwprvngmra lelghpgemr aalnalvlag rktattclld eyaeetegle yvgerqalld
       61 segrsiatle ytgvevkpfa evtweharae gegdesledw revhrrfweg sgtpveedtv
      121 vvcltfrvmr digprrrgpa
//
LOCUS       WP_236064660             220 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5701 family protein, partial [Streptomyces poriferorum].
ACCESSION   WP_236064660
VERSION     WP_236064660.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces poriferorum
  ORGANISM  Streptomyces poriferorum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039508.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18959.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Streptomyces poriferorum"
                     /db_xref="taxon:2798799"
     Protein         <1..220
                     /product="DUF5701 family protein"
     Region          10..215
                     /region_name="DUF5701"
                     /note="Family of unknown function (DUF5701); pfam18959"
                     /db_xref="CDD:465932"
ORIGIN      
        1 lpplstqadt lielgvheia glsaaeiraf akaaededrn gdqhddgngg gllaihpdra
       61 pasaiapllr rddkpgfvvv dmpdvdlftp ldtvvvpdap lyvisgvdrg dhmanwspde
      121 alpaltaqnr tplllsegih wvlqqpaale rnhcfmtigs rlrkangnld artpalwisn
      181 gtgrdgrerr napkagwcwa gnrhtwlgfg satgrhlpaa
//
LOCUS       WP_236064665             366 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: amidohydrolase family protein [Streptomyces].
ACCESSION   WP_236064665
VERSION     WP_236064665.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
REFERENCE   1  (residues 1 to 366)
  AUTHORS   Gao,G., Nara,T., Nakajima-Shimada,J. and Aoki,T.
  TITLE     Novel organization and sequences of five genes encoding all six
            enzymes for de novo pyrimidine biosynthesis in Trypanosoma cruzi
  JOURNAL   J Mol Biol 285 (1), 149-161 (1999)
   PUBMED   9878395
REFERENCE   2  (residues 1 to 366)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
REFERENCE   3  (residues 1 to 366)
  AUTHORS   Nygaard,P., Duckert,P. and Saxild,H.H.
  TITLE     Role of adenine deaminase in purine salvage and nitrogen metabolism
            and characterization of the ade gene in Bacillus subtilis
  JOURNAL   J Bacteriol 178 (3), 846-853 (1996)
   PUBMED   8550522
REFERENCE   4  (residues 1 to 366)
  AUTHORS   Lollier,M., Jaquet,L., Nedeva,T., Lacroute,F., Potier,S. and
            Souciet,J.L.
  TITLE     As in Saccharomyces cerevisiae, aspartate transcarbamoylase is
            assembled on a multifunctional protein including a
            dihydroorotase-like cryptic domain in Schizosaccharomyces pombe
  JOURNAL   Curr Genet 28 (2), 138-149 (1995)
   PUBMED   8590465
REFERENCE   5  (residues 1 to 366)
  AUTHORS   Jabri,E., Carr,M.B., Hausinger,R.P. and Karplus,P.A.
  TITLE     The crystal structure of urease from Klebsiella aerogenes
  JOURNAL   Science 268 (5213), 998-1004 (1995)
   PUBMED   7754395
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01979.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..366
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=39549
     Region          50..352
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
     Site            order(60,62,193,213,286)
                     /site_type="active"
                     /db_xref="CDD:238617"
ORIGIN      
        1 msdheaprvl qvkgrvlvgp edvrdeiwav dgrvtyerpp gadeavvvtg walpglvdah
       61 chvgldhhga vdpattekqa lddrgagall lrdagspadt rwiddredlp kiiragrhia
      121 rtrrytrnya yeiepdelva yvgqearrgd gwvklvgdwi drevgdltac wpreevgaai
      181 aeahrlgarv tahcfaedsl rdlveagidc vehatgltee tiplfaergv aivptlvnia
      241 tfptladgge akyprwsahm rrlherrydt vraaydagvp vfvgtdaggv lahglvagev
      301 aelvkagipa lealsattwa arawlgrpgl eegapadlvv ydedpradvr vlaaprrvvl
      361 ngrvig
//
LOCUS       WP_236064770             121 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase family protein [Reticulibacter mediterranei].
ACCESSION   WP_236064770
VERSION     WP_236064770.1
KEYWORDS    RefSeq.
SOURCE      Reticulibacter mediterranei
  ORGANISM  Reticulibacter mediterranei
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Reticulibacteraceae; Reticulibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026041.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14690.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Reticulibacter mediterranei"
                     /db_xref="taxon:2778369"
     Protein         1..121
                     /product="transposase family protein"
                     /calculated_mol_wt=13269
     Region          36..>63
                     /region_name="zf-ISL3"
                     /note="zinc-finger of transposase
                     IS204/IS1001/IS1096/IS1165; pfam14690"
                     /db_xref="CDD:464264"
ORIGIN      
        1 mevkqvaalp erlevtdaem skdmftitav slqahpacpl cgelatrvhs yytrkvadlp
       61 mgglggfswi dvlltfapgc nailvhntfd svlarvkqgc klpvthrivp lvqrfkmnfl
      121 r
//
LOCUS       WP_236064811             237 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Reticulibacter mediterranei].
ACCESSION   WP_236064811
VERSION     WP_236064811.1
KEYWORDS    RefSeq.
SOURCE      Reticulibacter mediterranei
  ORGANISM  Reticulibacter mediterranei
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Reticulibacteraceae; Reticulibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02371.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Reticulibacter mediterranei"
                     /db_xref="taxon:2778369"
     Protein         1..237
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=26458
     Region          <81..228
                     /region_name="COG3547"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442768"
ORIGIN      
        1 mqqrstllfl qafptsvaak aasvtqveqv lkqvghptvr kvapkihetl qqpslsahai
       61 ttrtklrlal aliaqllplv eqiaayekei erlflthads qifeslpgag krlaprllae
      121 igddrsryta cqelaalagt alvlyqsgny rkahhrhacl kplrnalyql artsrqqepw
      181 adeyyqrkra egkshsvall alsnvwlril yrmwtthtpy dpaifaasrq ahapraa
//
LOCUS       WP_236064799              73 aa            linear   BCT 02-MAR-2025
DEFINITION  CocE/NonD family hydrolase C-terminal non-catalytic
            domain-containing protein [Reticulibacter mediterranei].
ACCESSION   WP_236064799
VERSION     WP_236064799.1
KEYWORDS    RefSeq.
SOURCE      Reticulibacter mediterranei
  ORGANISM  Reticulibacter mediterranei
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Reticulibacteraceae; Reticulibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020119.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08530.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Reticulibacter mediterranei"
                     /db_xref="taxon:2778369"
     Protein         1..73
                     /product="CocE/NonD family hydrolase C-terminal
                     non-catalytic domain-containing protein"
                     /GO_function="GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=7991
     Region          <1..69
                     /region_name="COG2936"
                     /note="Predicted acyl esterase [General function
                     prediction only]"
                     /db_xref="CDD:442179"
ORIGIN      
        1 mrididlwpt ayhfrkgqrl rvqvssgahp rfarnlgtge platgtkmqa asqtiyhdpa
       61 hpsriilpvt tna
//
LOCUS       WP_236064820             236 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Reticulibacter mediterranei].
ACCESSION   WP_236064820
VERSION     WP_236064820.1
KEYWORDS    RefSeq.
SOURCE      Reticulibacter mediterranei
  ORGANISM  Reticulibacter mediterranei
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Reticulibacteraceae; Reticulibacter.
REFERENCE   1  (residues 1 to 236)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Reticulibacter mediterranei"
                     /db_xref="taxon:2778369"
     Protein         1..236
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=26311
     Region          12..232
                     /region_name="PRK10529"
                     /note="DNA-binding transcriptional activator KdpE;
                     Provisional"
                     /db_xref="CDD:182522"
ORIGIN      
        1 mdrymhksga rilvvddeie imralqrslt ahdyevftam sgeealdait qyrpdlllld
       61 lglpgisgle vcrsvrkqsn lpiivlsvkd terdkvlald lgaddyvskp fginevlarv
      121 rvalrhaapi qagtepvfaa gplrvdfarr lvqvndqevk ltpteydllk aliknagkim
      181 trqmlltqvw gtgygseahy lhvyigqlrr kiepdpthpr fiqtisgvgy rfasde
//
LOCUS       WP_236064883             338 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase [Reticulibacter mediterranei].
ACCESSION   WP_236064883
VERSION     WP_236064883.1
KEYWORDS    RefSeq.
SOURCE      Reticulibacter mediterranei
  ORGANISM  Reticulibacter mediterranei
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Reticulibacteraceae; Reticulibacter.
REFERENCE   1  (residues 1 to 338)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 338)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Reticulibacter mediterranei"
                     /db_xref="taxon:2778369"
     Protein         1..338
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=37489
     Region          20..327
                     /region_name="AKR_AKR14A1_2"
                     /note="AKR14A family of aldo-keto reductase (AKR);
                     cd19089"
                     /db_xref="CDD:381315"
     Site            order(36..38,40,66,70..71,102,140,170,196,224..229,233,
                     235,283,300..304,308,311..312)
                     /site_type="active"
                     /db_xref="CDD:381315"
     Site            order(66,71,99,140)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381315"
ORIGIN      
        1 maeetvassf aqdrydrmqy rrtgrsglml paislgawet fggyrgeeva raclyrafdl
       61 githfdlann ygrppgnaer vvgkilrdmp rdeliisska gyrmwpgpyg ewlskkylva
      121 sldqslqrlg ldyvdifyah rpdpetplee tmaaldlivr qgkalyvgvs nfsgvqfena
      181 vsitkqmglt pitihqpyyn llgrrpeydl fdhtlragag vitfsplaqg lltskylgsd
      241 lpddsraaaw wgksqndevl tgekldkirr lnaiaqergq tlaqmalawn lrhpavtsvl
      301 igaskveqie envaalenla fsveelkaid eitgvpsl
//
LOCUS       WP_236064932              76 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Reticulibacter
            mediterranei].
ACCESSION   WP_236064932
VERSION     WP_236064932.1
KEYWORDS    RefSeq.
SOURCE      Reticulibacter mediterranei
  ORGANISM  Reticulibacter mediterranei
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Reticulibacteraceae; Reticulibacter.
REFERENCE   1  (residues 1 to 76)
  AUTHORS   Ren,J., Sainsbury,S., Nettleship,J.E., Saunders,N.J. and Owens,R.J.
  TITLE     The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals
            a novel protein fold incorporating a helix-turn-helix motif
  JOURNAL   Proteins 78 (7), 1798-1802 (2010)
   PUBMED   20196080
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013540.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01381.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Reticulibacter mediterranei"
                     /db_xref="taxon:2778369"
     Protein         1..76
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=8610
     Region          3..70
                     /region_name="YozG"
                     /note="DNA-binding transcriptional regulator, XRE family
                     [Transcription]; COG3655"
                     /db_xref="CDD:442872"
ORIGIN      
        1 mrirlrvkei aeqkgysmgk lerladlshp tirdifrnpy kevttttlak lataldvhis
       61 elyeeipdne gtkpev
//
LOCUS       WP_236064941             231 aa            linear   BCT 02-MAR-2025
DEFINITION  copper resistance protein CopC [Reticulibacter mediterranei].
ACCESSION   WP_236064941
VERSION     WP_236064941.1
KEYWORDS    RefSeq.
SOURCE      Reticulibacter mediterranei
  ORGANISM  Reticulibacter mediterranei
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Reticulibacteraceae; Reticulibacter.
REFERENCE   1  (residues 1 to 231)
  AUTHORS   Cha,J.S. and Cooksey,D.A.
  TITLE     Copper resistance in Pseudomonas syringae mediated by periplasmic
            and outer membrane proteins
  JOURNAL   Proc Natl Acad Sci U S A 88 (20), 8915-8919 (1991)
   PUBMED   1924351
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016149.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04234.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Reticulibacter mediterranei"
                     /db_xref="taxon:2778369"
     Protein         1..231
                     /product="copper resistance protein CopC"
                     /GO_component="GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /GO_function="GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0046688 - response to copper ion [Evidence
                     IEA]"
                     /calculated_mol_wt=24578
     Region          <5..72
                     /region_name="CopC"
                     /note="Copper-binding protein CopC (methionine-rich)
                     [Inorganic ion transport and metabolism]; cl42369"
                     /db_xref="CDD:478161"
ORIGIN      
        1 manirfsdlk vynqarqrvd lndshaaads ysllvsvrpn lpdaaytvvf snissedghh
       61 vvgafsfvvg agalptntda lvaqvqsgqs nfnawsvglr wlnylgmall lgtvafilfv
      121 wrptfvslre qvgaainkad vgveqgalri mggsmlllfv atlafliyqa afasasapwe
      181 ivgngteqsa vseplwgclv dtscpacrnw rcyvvqlaas lplgeaspha l
//
LOCUS       WP_236064959             161 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-ribbon domain containing protein [Reticulibacter
            mediterranei].
ACCESSION   WP_236064959
VERSION     WP_236064959.1
KEYWORDS    RefSeq.
SOURCE      Reticulibacter mediterranei
  ORGANISM  Reticulibacter mediterranei
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Reticulibacteraceae; Reticulibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024843.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13451.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Reticulibacter mediterranei"
                     /db_xref="taxon:2778369"
     Protein         1..161
                     /product="zinc-ribbon domain containing protein"
                     /calculated_mol_wt=18057
     Region          8..53
                     /region_name="zf-trcl"
                     /note="Probable zinc-ribbon domain; pfam13451"
                     /db_xref="CDD:463883"
     Region          66..101
                     /region_name="cxxc_cxxc_Mbark"
                     /note="CxxC-x17-CxxC domain; TIGR04272"
                     /db_xref="CDD:275095"
ORIGIN      
        1 mmsnegyrdr iltcrdcgne ftftageqef faskgltnpp grcpscraar rgqqfsggga
       61 rasrgeqyda icaacgrptt vpfmpredrp vycsdcfqaq rasrrprees nsysfssgse
      121 nnygggsygg gnygrdrrgg rdrrgnnrdr errdnrwddr w
//
LOCUS       WP_236065072             163 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Reticulibacter
            mediterranei].
ACCESSION   WP_236065072
VERSION     WP_236065072.1
KEYWORDS    RefSeq.
SOURCE      Reticulibacter mediterranei
  ORGANISM  Reticulibacter mediterranei
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Reticulibacteraceae; Reticulibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024954.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13565.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Reticulibacter mediterranei"
                     /db_xref="taxon:2778369"
     Protein         1..163
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=17964
     Region          33..>157
                     /region_name="transpos_IS630"
                     /note="IS630 family transposase; NF033545"
                     /db_xref="CDD:468076"
ORIGIN      
        1 mskrasqvkl terqqaelvq itrrhrseqq qvlrariila aaqghsnaqi arqfainvdt
       61 arlwrdrwvs lqeidldtls gadrlcdapr pgappritae qrcqiaalac eapmkygrti
      121 sqwtgreiat evkargivse isprhaayll kkggcnptgs dig
//
LOCUS       WP_236065081             748 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Reticulibacter mediterranei].
ACCESSION   WP_236065081
VERSION     WP_236065081.1
KEYWORDS    RefSeq.
SOURCE      Reticulibacter mediterranei
  ORGANISM  Reticulibacter mediterranei
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Reticulibacteraceae; Reticulibacter.
REFERENCE   1  (residues 1 to 748)
  AUTHORS   Das,A.K., Cohen,P.W. and Barford,D.
  TITLE     The structure of the tetratricopeptide repeats of protein
            phosphatase 5: implications for TPR-mediated protein-protein
            interactions
  JOURNAL   EMBO J 17 (5), 1192-1199 (1998)
   PUBMED   9482716
REFERENCE   2  (residues 1 to 748)
  AUTHORS   Lamb,J.R., Tugendreich,S. and Hieter,P.
  TITLE     Tetratrico peptide repeat interactions: to TPR or not to TPR?
  JOURNAL   Trends Biochem Sci 20 (7), 257-259 (1995)
   PUBMED   7667876
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019339.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07719.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Reticulibacter mediterranei"
                     /db_xref="taxon:2778369"
     Protein         1..748
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=86812
     Region          272..>340
                     /region_name="PRK02603"
                     /note="photosystem I assembly protein Ycf3; Provisional"
                     /db_xref="CDD:179448"
     Region          272..304
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          311..544
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          311..336
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(312..313,316..317,319,343,346..347,350..351,
                     353..354,377,383..384,387..388,391)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          341..371
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          416..441
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(417..418,421..422,424,448,451..452,455..456,
                     458..459,482,485..486,489..490,493)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          440..684
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          446..476
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          481..509
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          517..543
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(519..520,523..524,526,550,553..554,557..558,
                     560..561,584,587..588,591..592,595)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          548..578
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          583..611
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          651..681
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          686..714
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mylfnkgitd adqmtaiwqa segiplflsl ltfrpqdnvd ptsdvvtnfl hgipqqesak
       61 rqlaldaall srpfnqddlq vftyvsesdr pslyqwltkq pfvrsrlqdg rylyhdvvrn
      121 lfsrylcqrs qkhyegirga laihyqglle kteeergkea yrseewleql vavisqllll
      181 pdqachikal erilhasyeh tdkeqnreiv ralsdlsqks tpyplspvah eiiiyllcyi
      241 nadhgsyewl eagnallkkv ihapafpstv lakmyykrgr aynnmdnkff dkklaiddfq
      301 qaltlfeekn yfdrgfayfy sgnyrealai yeqalednpq dadayfgrgw aylrlqeyqr
      361 avddfehvle lapsyqnpgg lynglrqayy dagkyqpals andhyieehp resspyafrg
      421 scyfalgnyq ccieactyal eldpsniyay yergfarvhl reyqlgladf dhileldprw
      481 seayngrgwa yyyvgehqqa ieafnhllql kpaytaairg lgltyyqlke ysqaltlfdr
      541 rielkvpypn aftdrsrcyq alqeyqrsiq dcneaielas kgsqayfqrg laylclkdle
      601 qaradftqsy eleptriasa lmaewtrlcl eatslpiler lktiatvdsq nyiahicqgv
      661 alllhrnfke alvelekall ikqdrwevyf wkgiasafle qdeeaipsve kaldfglppt
      721 lltplhwfeq erpkfyekfa lplltkye
//
LOCUS       WP_236065089             790 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Reticulibacter
            mediterranei].
ACCESSION   WP_236065089
VERSION     WP_236065089.1
KEYWORDS    RefSeq.
SOURCE      Reticulibacter mediterranei
  ORGANISM  Reticulibacter mediterranei
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Reticulibacteraceae; Reticulibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Reticulibacter mediterranei"
                     /db_xref="taxon:2778369"
     Protein         1..790
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=88586
     Region          21..640
                     /region_name="COG3903"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443109"
     Region          <684..790
                     /region_name="CitB"
                     /note="DNA-binding response regulator, NarL/FixJ family,
                     contains REC and HTH domains [Signal transduction
                     mechanisms, Transcription]; COG2197"
                     /db_xref="CDD:441799"
ORIGIN      
        1 mkpligreqd lheicsllqe prirlltltg pggvgktrla mqvakematn aslfadgccf
       61 vslaaireke lvlpaiiqgl glkeaaqqap lqaltmalce khlllvldnf eqvgeaaplm
      121 geivarcpwl klvitsretl hlrdeyefrv pplalpdlsh lpdyealaqt aavalflqrv
      181 qmvqpdfclt ennartiadi cnrldglpla ielaaarikl lsppvllakl gsrlalltss
      241 trdvperqqt lrktmewsyq llthrerclf qrlavfvggc tleaietvcg ggeygpqyee
      301 emlkevetlv dhnllqvqrq daneelrfvm letireyale clqnsqeeat irqahavyyl
      361 alteriaprv rqtasalwtq pieqeidnvr aalqwtiaqr dgemalhfcg alwsfwtlsh
      421 tvegyhwmeq alacceesvt qvqgrtrara lygagiltfy vrpmapavtf yeealrlfrq
      481 agdiyntvlv lhvmaavalr fnkyeaifta tdesmallek iedrwlqada lhfsalgryf
      541 qgdytraytl ekrgvelare tgepyvrvrt lygkalfaqa lqksaevvaa reeciailwe
      601 qkqasnrsti alclislggi vavqkhyiwa arlwgatral ydlvdvnpqq gpydwlkmal
      661 mgylndgrla etvqvqleqq kfleawnegq ampleqllrp slqiidapaa tplqarqklv
      721 fsspplsenl tpretevlil maqgltssqi aqklhitvlt vnshvrsiyg klgissrsaa
      781 tryaleqkli
//
LOCUS       WP_236065180             924 aa            linear   BCT 02-MAR-2025
DEFINITION  membrane dipeptidase [Reticulibacter mediterranei].
ACCESSION   WP_236065180
VERSION     WP_236065180.1
KEYWORDS    RefSeq.
SOURCE      Reticulibacter mediterranei
  ORGANISM  Reticulibacter mediterranei
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Reticulibacteraceae; Reticulibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013413.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01244.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..924
                     /organism="Reticulibacter mediterranei"
                     /db_xref="taxon:2778369"
     Protein         1..924
                     /product="membrane dipeptidase"
                     /EC_number="3.4.13.-"
                     /GO_function="GO:0070573 - metallodipeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=103217
     Region          373..684
                     /region_name="COG2355"
                     /note="Zn-dependent dipeptidase, microsomal dipeptidase
                     homolog [Posttranslational modification, protein turnover,
                     chaperones, Amino acid transport and metabolism]"
                     /db_xref="CDD:441922"
ORIGIN      
        1 mmrlnttdkq tlppreesse qspprveipe nsslrlpgma gatagprppc fdfesgnlsg
       61 wtaegeaflk qpvrgdrfvt sqvrpgiipl ggdywngryp vghqgeywis teghltgtlt
      121 sdefvieaqf pwfnfliggh ddedaccvsl likateanqq rlseayplvq iegrgafyqv
      181 faagvhkder mrresflaeh yagehacirv vdnatsghin vddfrfstda patlpieagg
      241 gdpaapvwgf adlhthpmah lafggvafwg esdgsiesal pwctpahgig glgiagregn
      301 vlmsffeqvg ygldvghrvg gypqfdgwpr fttmvhqqmy idwirraydg glrlmvahvl
      361 nnemmanqyd ghapyddkta vemqiaamka vaarhadwme iayshadarr iihlnklavv
      421 lgievdslgn wkdpdavted emrsylhhly hdlgvrhlfp vhmvnnvisg taiyqdvfsl
      481 vnyflhhqyf qvedgsayai qfrleedpgp aieigrvtqg ynppyqqvsg ghmnsaglts
      541 kgrfflqema rlgmlievdh mshkaveeal tlveqydypv vaghigfrel swqrhtetes
      601 ihkcaseglk taeqverirk lggiiapias qsdirdvgdv ipslkgkvrd dcagssktwa
      661 qaylyavekm ggrgvaigtd tngfakfngp rfglnagyfl dynvagmgid pkrralrkeq
      721 arvqengvry geplidprqy rfegvlqgdv yddmdrdiwq aialykagyn pwtepvdlle
      781 lferakhfak gffatsddql erpgllpgde pweqraaflv ktgqqpghsv rdpqrvheiy
      841 pkvlaiwqkw qamegdnppl krsragqrdf dinidgvahy gmlpdlvqdl knvgltdddl
      901 lpffrsaedy iqtwekcerq skll
//
LOCUS       WP_236065191             400 aa            linear   BCT 02-MAR-2025
DEFINITION  phage portal protein [Reticulibacter mediterranei].
ACCESSION   WP_236065191
VERSION     WP_236065191.1
KEYWORDS    RefSeq.
SOURCE      Reticulibacter mediterranei
  ORGANISM  Reticulibacter mediterranei
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Reticulibacteraceae; Reticulibacter.
REFERENCE   1  (residues 1 to 400)
  AUTHORS   Chaban,Y., Lurz,R., Brasiles,S., Cornilleau,C., Karreman,M.,
            Zinn-Justin,S., Tavares,P. and Orlova,E.V.
  TITLE     Structural rearrangements in the phage head-to-tail interface
            during assembly and infection
  JOURNAL   Proc Natl Acad Sci U S A 112 (22), 7009-7014 (2015)
   PUBMED   25991862
REFERENCE   2  (residues 1 to 400)
  AUTHORS   Lebedev,A.A., Krause,M.H., Isidro,A.L., Vagin,A.A., Orlova,E.V.,
            Turner,J., Dodson,E.J., Tavares,P. and Antson,A.A.
  TITLE     Structural framework for DNA translocation via the viral portal
            protein
  JOURNAL   EMBO J 26 (7), 1984-1994 (2007)
   PUBMED   17363899
REFERENCE   3  (residues 1 to 400)
  AUTHORS   Lurz,R., Orlova,E.V., Gunther,D., Dube,P., Droge,A., Weise,F., van
            Heel,M. and Tavares,P.
  TITLE     Structural organisation of the head-to-tail interface of a
            bacterial virus
  JOURNAL   J Mol Biol 310 (5), 1027-1037 (2001)
   PUBMED   11501993
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016988.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05133.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Reticulibacter mediterranei"
                     /db_xref="taxon:2778369"
     Protein         1..400
                     /product="phage portal protein"
                     /calculated_mol_wt=46160
     Region          84..>219
                     /region_name="Phage_prot_Gp6"
                     /note="Phage portal protein, SPP1 Gp6-like; cl19531"
                     /db_xref="CDD:418597"
ORIGIN      
        1 mrfldrflks siypdeeqiq eqidptllaf aaptqedytw sklttggeed yywrrlsdva
       61 yqkdlmpsty lelhnliyes yhanplafai iemttsfvlg kgitvdavdr evqrvlldfw
      121 rentmderiy nictelalyg eifvrffink yngsvkvrli dpslidlies dpedietpvr
      181 fhrrpvvqti satdpatmqn ltpitkldis tsytqgewyr ageemlqfai nkvsnarrgn
      241 sdlatllpwl rrykdwltdr vrinkyksvf lydvtlrgad kkaidrkkme ytyppepgsv
      301 iihneteqws avqpqiqand akedgraikl miaagaglpe hylrgegtpv krgeyctsir
      361 gsmcslravv rrevsrrkrf sssrwmtgwe tlctcvctsp
//
LOCUS       WP_236065206             143 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Reticulibacter
            mediterranei].
ACCESSION   WP_236065206
VERSION     WP_236065206.1
KEYWORDS    RefSeq.
SOURCE      Reticulibacter mediterranei
  ORGANISM  Reticulibacter mediterranei
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Reticulibacteraceae; Reticulibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024908.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13518.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Reticulibacter mediterranei"
                     /db_xref="taxon:2778369"
     Protein         1..143
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=16548
     Region          9..>127
                     /region_name="transpos_IS630"
                     /note="IS630 family transposase; NF033545"
                     /db_xref="CDD:468076"
ORIGIN      
        1 mkaysidmre rvlqavekgy preeiiklfg isrstikryl kqwhetgnvd rrpipgrpsk
       61 kfaplqaglt aqlqahpdvt lerhcqlweq ehgqrvsttt mgrairrmgw trkkrrwvpp
      121 netkrrevlg enssssstpa nws
//
LOCUS       WP_236065210             102 aa            linear   BCT 02-MAR-2025
DEFINITION  BBE domain-containing protein [Reticulibacter mediterranei].
ACCESSION   WP_236065210
VERSION     WP_236065210.1
KEYWORDS    RefSeq.
SOURCE      Reticulibacter mediterranei
  ORGANISM  Reticulibacter mediterranei
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Reticulibacteraceae; Reticulibacter.
REFERENCE   1  (residues 1 to 102)
  AUTHORS   Facchini,P.J., Penzes,C., Johnson,A.G. and Bull,D.
  TITLE     Molecular characterization of berberine bridge enzyme genes from
            opium poppy
  JOURNAL   Plant Physiol 112 (4), 1669-1677 (1996)
   PUBMED   8972604
REFERENCE   2  (residues 1 to 102)
  AUTHORS   Kutchan,T.M. and Dittrich,H.
  TITLE     Characterization and mechanism of the berberine bridge enzyme, a
            covalently flavinylated oxidase of benzophenanthridine alkaloid
            biosynthesis in plants
  JOURNAL   J Biol Chem 270 (41), 24475-24481 (1995)
   PUBMED   7592663
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019643.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08031.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Reticulibacter mediterranei"
                     /db_xref="taxon:2778369"
     Protein         1..102
                     /product="BBE domain-containing protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=11478
     Region          <14..90
                     /region_name="GlcD"
                     /note="FAD/FMN-containing lactate dehydrogenase/glycolate
                     oxidase [Energy production and conversion]; COG0277"
                     /db_xref="CDD:440046"
     Region          54..90
                     /region_name="BBE"
                     /note="Berberine and berberine like; pfam08031"
                     /db_xref="CDD:369658"
ORIGIN      
        1 malsetpfal rqdhlmveii agwepsspde eqrhiqwaqs lshalapyaf kggyvnllde
       61 rerdripqaf gsnyqhllnl kraydpddvf qstighvspm as
//
LOCUS       WP_236065280             131 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Reticulibacter mediterranei].
ACCESSION   WP_236065280
VERSION     WP_236065280.1
KEYWORDS    RefSeq.
SOURCE      Reticulibacter mediterranei
  ORGANISM  Reticulibacter mediterranei
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Ktedonobacterales; Reticulibacteraceae; Reticulibacter.
REFERENCE   1  (residues 1 to 131)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 131)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Reticulibacter mediterranei"
                     /db_xref="taxon:2778369"
     Protein         1..131
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=14465
     Region          <9..116
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
ORIGIN      
        1 makggtiarq ealrsqwdap elryqlvdgd ttllpgieli etsghspghq svlvrlpqtg
       61 pvllaidaip sagcldpdtr pltpfdmdee evrastrkli alaerervtl ivhghdrdqw
      121 qqlkclpeyy t
//
LOCUS       WP_236065916             108 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF3764 family protein [Prochlorococcus].
ACCESSION   WP_236065916
VERSION     WP_236065916.1
KEYWORDS    RefSeq.
SOURCE      Prochlorococcus
  ORGANISM  Prochlorococcus
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Synechococcales; Prochlorococcaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024008.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12594.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Prochlorococcus"
                     /db_xref="taxon:1218"
     Protein         1..108
                     /product="DUF3764 family protein"
                     /calculated_mol_wt=12058
     Region          17..107
                     /region_name="DUF3764"
                     /note="Protein of unknown function (DUF3764); pfam12594"
                     /db_xref="CDD:463638"
ORIGIN      
        1 mgkhgligrn yslgmaiett vfdfkisktf dewraiydse dnkamlkagg itslyrglhk
       61 edssraivif qaeegvamgm wndpeaklmi essghiydet aitqwidh
//
LOCUS       WP_236065918             354 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase, partial [Prochlorococcus marinus].
ACCESSION   WP_236065918
VERSION     WP_236065918.1
KEYWORDS    RefSeq.
SOURCE      Prochlorococcus marinus
  ORGANISM  Prochlorococcus marinus
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Synechococcales; Prochlorococcaceae; Prochlorococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Prochlorococcus marinus"
                     /db_xref="taxon:1219"
     Protein         <1..354
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          <194..331
                     /region_name="Peptidases_S8_S53"
                     /note="Peptidase domain in the S8 and S53 families;
                     cl10459"
                     /db_xref="CDD:415849"
ORIGIN      
        1 ekittednsy riregmsdst keqwnlnamd aasawrfnkg sedvvlvsld sglkdsgdgs
       61 aavhdeighi syetgintyn sdhghqamsv maakhdsqnl agiapgsqlw gynvktssqg
      121 giglydalvs vdskrscner ivfqggiqgd wpwtandssk edvetelgks sewgffaiaa
      181 gnggpggnld dddyltsvsg vaaastdfdh iasvgalqft gteeidaitg gsltnvtgtq
      241 lagysnrgdn ltlvaptnsk ainangtvst fggtscanpn vagaaaivws enlsltggei
      301 reilttsamd lgdpgrdnty gagtvnidsa vrrshalsvd nelaslysnt efla
//
LOCUS       WP_236066169             182 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-hairpin-helix domain-containing protein, partial
            [Streptomyces poriferorum].
ACCESSION   WP_236066169
VERSION     WP_236066169.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces poriferorum
  ORGANISM  Streptomyces poriferorum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Streptomyces poriferorum"
                     /db_xref="taxon:2798799"
     Protein         <1..182
                     /product="helix-hairpin-helix domain-containing protein"
     Region          <14..149
                     /region_name="UvrC"
                     /note="Excinuclease UvrABC, nuclease subunit [Replication,
                     recombination and repair]; COG0322"
                     /db_xref="CDD:440091"
ORIGIN      
        1 aepreddgrp krfayppqll vvdggqpqva aakraldelg iddiavcgla krleevwlpd
       61 dddpvvlprs seglyllqrv rdeahrfait yqrakrakri rsgpldavtg lgdtrkqali
      121 khfgsvkklr qatideicev pgigrrtaes vvvalaaaap atpavntatg eiieeddggs
      181 tt
//
LOCUS       WP_236066156             251 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: SDR family NAD(P)-dependent oxidoreductase
            [Prochlorococcus].
ACCESSION   WP_236066156
VERSION     WP_236066156.1
KEYWORDS    RefSeq.
SOURCE      Prochlorococcus
  ORGANISM  Prochlorococcus
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Synechococcales; Prochlorococcaceae.
REFERENCE   1  (residues 1 to 251)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 251)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Prochlorococcus"
                     /db_xref="taxon:1218"
     Protein         1..251
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=27469
     Region          17..251
                     /region_name="PRK07102"
                     /note="SDR family oxidoreductase"
                     /db_xref="CDD:180838"
ORIGIN      
        1 mntmgqaart pirssfvlgs tseiakaich elarcgcrqf hliarnqagn eqlaeqlrnh
       61 ygavvtqeqt dlltdvaldg pgkpqvgnyd lylitagslg dlelarndat ealritaany
      121 sgllpwltai atperlsgpg rlwvfssvaa dlgrpsnyhy gaakaaltaf ceglqlrcqr
      181 kpfavrtika gfmatsmtig kapkvlcvsp qsvardllrr pnrrgieylp wwwaqimwfi
      241 rllpapfasr l
//
LOCUS       WP_236066197             118 aa            linear   BCT 02-MAR-2025
DEFINITION  acyltransferase domain-containing protein, partial [Streptomyces
            poriferorum].
ACCESSION   WP_236066197
VERSION     WP_236066197.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces poriferorum
  ORGANISM  Streptomyces poriferorum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 118)
  AUTHORS   Serre,L., Verbree,E.C., Dauter,Z., Stuitje,A.R. and Derewenda,Z.S.
  TITLE     The Escherichia coli malonyl-CoA:acyl carrier protein transacylase
            at 1.5-A resolution. Crystal structure of a fatty acid synthase
            component
  JOURNAL   J Biol Chem 270 (22), 12961-12964 (1995)
   PUBMED   7768883
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012901.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00698.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Streptomyces poriferorum"
                     /db_xref="taxon:2798799"
     Protein         <1..>118
                     /product="acyltransferase domain-containing protein"
     Region          <1..117
                     /region_name="Acyl_transf_1"
                     /note="Acyl transferase domain; cl08282"
                     /db_xref="CDD:471802"
ORIGIN      
        1 gegrrtsalr vshafhsplm epmlaefgav vaglsfgaas ipvvsgvsge lsqevstpey
       61 wvrhvreavr fadavsfvvs rgvtsfvevg pdgvlcgmaq qsvdaeaavf vplvrkgr
//
LOCUS       WP_236066208             431 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: cation:dicarboxylate symporter family transporter
            [Pseudomonas].
ACCESSION   WP_236066208
VERSION     WP_236066208.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012593.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00375.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..431
                     /product="cation:dicarboxylate symporter family
                     transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /calculated_mol_wt=45195
     Region          8..410
                     /region_name="SDF"
                     /note="Sodium:dicarboxylate symporter family; cl00573"
                     /db_xref="CDD:444986"
ORIGIN      
        1 mgirtpsslv trimiglvag vivgillnqf pehkawfidn llqpagdlfi klmkmivvpl
       61 vfacmtvgia gagstralgr vgmktfvyff titsiailfg lvvgnvfqpg agadfsstlq
      121 apvttlasst etqnlgrtlv aivpdnivla maegkllsvl ffailfgcal smlpqqqkap
      181 lisvmqgvsd tmfkvthlvm hyspigifgl igvtvasfgl sallplakli gityvavllf
      241 alcvlgavar lagvrffhll reirsellla yssaasatvm pqliekmery gaprpitsmv
      301 iplgysfnld gaslfaalgt lfiaqaygid ldladqamlv limvltskga agvpgfmfii
      361 ltatltaagl pvegvaiiag vyrlmdmpvt alnvlgnala plviarwegq lkapgqtapa
      421 spaapdlkle a
//
LOCUS       WP_236066248             208 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6338 family protein [Pseudomonas].
ACCESSION   WP_236066248
VERSION     WP_236066248.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
REFERENCE   1  (residues 1 to 208)
  AUTHORS   Liu,Y., Li,M., Mu,H., Song,S., Zhang,Y., Chen,K., He,X., Wang,H.,
            Dai,Y., Lu,F., Yan,Z. and Zhang,H.
  TITLE     Identification and characterization of the ficellomycin
            biosynthesis gene cluster from Streptomyces ficellus
  JOURNAL   Appl Microbiol Biotechnol 101 (20), 7589-7602 (2017)
   PUBMED   28894917
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039733.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19865.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..208
                     /product="DUF6338 family protein"
                     /calculated_mol_wt=23390
     Region          15..204
                     /region_name="DUF6338"
                     /note="Family of unknown function (DUF6338); pfam19865"
                     /db_xref="CDD:466212"
ORIGIN      
        1 meqaledlat kilplvqmli pgfittmify wladvkkpgq fertvqalig tgiitiivsg
       61 iskvllwmgd hwfvmglwtt dvesawgial aiclglglsy asnhdylygi arqlgltsra
      121 sypewvyafr krsghsvvlt lldgrrlfgy pqvwptdpat ghflitqpcw ldeqdewvem
      181 pgiesylvsn sdvlmvefle lqettndq
//
LOCUS       WP_236066317             469 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [Pseudomonas].
ACCESSION   WP_236066317
VERSION     WP_236066317.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..469
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=49462
     Region          25..468
                     /region_name="PRK10504"
                     /note="putative transporter; Provisional"
                     /db_xref="CDD:182502"
ORIGIN      
        1 maeplpalrp vsrkvpmiig calcmelids tvvmtalpqm asdfgapsvr mnlvvslyml
       61 aaalcvpvsg waadrfgprr lfvvaivlfi vsslacaast sllqlclarm lqgaagammv
      121 pvgqvillrw spredlmrnl syltipalig pmigpplggl mvtfvswhwi flinlpiglv
      181 givlvlrhvp hypgvraral dvrglllsgt algalvfgfe alghgllpra wvavmigagl
      241 lcgawyirha rrcaeplldl sllripsyri sfwggnllrl gtssgpfllv lmfqlcfgls
      301 plhaglltla ggagaflmkl lavrvvrrfg irrtltgnal ltgltlgaca sftsdtpygv
      361 ivlmlfasav irslqfstlg altyadvpaa lssrasslsa mtvqlsmsls vglaasllgv
      421 lmnlrghatp vtsdvawvml lcglacmasa lvfrrlaada gnavyaarg
//
LOCUS       WP_236066334             204 aa            linear   BCT 02-MAR-2025
DEFINITION  tail fiber assembly protein [Pseudomonas palmensis].
ACCESSION   WP_236066334
VERSION     WP_236066334.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas palmensis
  ORGANISM  Pseudomonas palmensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 204)
  AUTHORS   Pell,L.G., Kanelis,V., Donaldson,L.W., Howell,P.L. and
            Davidson,A.R.
  TITLE     The phage lambda major tail protein structure reveals a common
            evolution for long-tailed phages and the type VI bacterial
            secretion system
  JOURNAL   Proc Natl Acad Sci U S A 106 (11), 4160-4165 (2009)
   PUBMED   19251647
REFERENCE   2  (residues 1 to 204)
  AUTHORS   Wang,J., Hofnung,M. and Charbit,A.
  TITLE     The C-terminal portion of the tail fiber protein of bacteriophage
            lambda is responsible for binding to LamB, its receptor at the
            surface of Escherichia coli K-12
  JOURNAL   J Bacteriol 182 (2), 508-512 (2000)
   PUBMED   10629200
REFERENCE   3  (residues 1 to 204)
  AUTHORS   Haggard-Ljungquist,E., Halling,C. and Calendar,R.
  TITLE     DNA sequences of the tail fiber genes of bacteriophage P2: evidence
            for horizontal transfer of tail fiber genes among unrelated
            bacteriophages
  JOURNAL   J Bacteriol 174 (5), 1462-1477 (1992)
   PUBMED   1531648
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014467.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02413.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Pseudomonas palmensis"
                     /db_xref="taxon:2815362"
     Protein         1..204
                     /product="tail fiber assembly protein"
                     /calculated_mol_wt=21730
     Region          <111..204
                     /region_name="Caudo_TAP"
                     /note="Caudovirales tail fibre assembly protein, lambda
                     gpK; cl17077"
                     /db_xref="CDD:450149"
ORIGIN      
        1 mriklspfsa detlvlsrsg esitingmkl dfealpdgam lpatatgcpw lygpvqridg
       61 eltltvrlph gaqaseqsrf pvdivnppdg rvplptdndp qpeslglawt dtvgvidwsq
      121 mitaemkqea aaaqhlagvq aeaatrrava dsaiaplqda vdiddataae vlslkawkky
      181 rvalsrlpeq pgypvdidwp appa
//
LOCUS       WP_236066631            1013 aa            linear   BCT 02-MAR-2025
DEFINITION  autotransporter domain-containing protein [Pseudomonas
            alliivorans].
ACCESSION   WP_236066631
VERSION     WP_236066631.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas alliivorans
  ORGANISM  Pseudomonas alliivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 1013)
  AUTHORS   Oomen,C.J., van Ulsen,P., van Gelder,P., Feijen,M., Tommassen,J.
            and Gros,P.
  TITLE     Structure of the translocator domain of a bacterial autotransporter
  JOURNAL   EMBO J 23 (6), 1257-1266 (2004)
   PUBMED   15014442
REFERENCE   2  (residues 1 to 1013)
  AUTHORS   Veiga,E., Sugawara,E., Nikaido,H., de Lorenzo,V. and Fernandez,L.A.
  TITLE     Export of autotransported proteins proceeds through an oligomeric
            ring shaped by C-terminal domains
  JOURNAL   EMBO J 21 (9), 2122-2131 (2002)
   PUBMED   11980709
REFERENCE   3  (residues 1 to 1013)
  AUTHORS   Henderson,I.R., Navarro-Garcia,F. and Nataro,J.P.
  TITLE     The great escape: structure and function of the autotransporter
            proteins
  JOURNAL   Trends Microbiol 6 (9), 370-378 (1998)
   PUBMED   9778731
REFERENCE   4  (residues 1 to 1013)
  AUTHORS   Pohlner,J., Halter,R., Beyreuther,K. and Meyer,T.F.
  TITLE     Gene structure and extracellular secretion of Neisseria gonorrhoeae
            IgA protease
  JOURNAL   Nature 325 (6103), 458-462 (1987)
   PUBMED   3027577
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015737.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03797.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1013
                     /organism="Pseudomonas alliivorans"
                     /db_xref="taxon:2810613"
     Protein         1..1013
                     /product="autotransporter domain-containing protein"
                     /calculated_mol_wt=104610
     Region          85..131
                     /region_name="rpt_T5SS_PEPC"
                     /note="T5SS/PEP-CTERM-associated repeat; TIGR04393"
                     /db_xref="CDD:275186"
     Region          116..1013
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          126..146
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          148..168
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          170..189
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          191..208
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          223..243
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          250..269
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          274..292
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          744..993
                     /region_name="Autotransporter"
                     /note="Autotransporter beta-domain; pfam03797"
                     /db_xref="CDD:461054"
ORIGIN      
        1 mnplfrispl afaitlallp etqaadfvln daqetfssdr vidgeirvrs tdgntaslti
       61 nngatvtseg gdmigqgstt gvnmakasvi vegagsrwiv prtsfvlgnt iriggagqgd
      121 ltvrnggqvs vrdldlgdvf gansnrfsqa dllvsgqnsl vdaanitadg vfvykssita
      181 ndggkinsqd vniestvrls gagtrwdnsg afrnrgdltl engavlatns mtlgsaissi
      241 snqvnisgqg trlsaqdltl gsdtrtyltl sdgaelsatn gilistisdi ntptegtlav
      301 ggsvtvdpnr tdvdsttaga aqaagridpa tairfgtgng ylafnhtdad lqfantlsgt
      361 grvyafngnt tlsgdlsgla gsvvvrggrl vlsgnvdqvn qrgntattqs lsrfnvgngt
      421 lvvngtagrn efgvytnsaq vleggvlagv gqvgstqvas ggtlspgena igalaiqgnl
      481 dmaagsryaa diagngasdr invsgtatlr gtqvnvtald paqsyqsgrt ytllsaqggl
      541 vdgatpgtay aqaatnsafl nvglqrtand lnltieqknt tptptpeptp tptpeptptp
      601 tptptptptp eptptptptp eptptptpep eptpapapgi fqtvmvtanq fntagalsal
      661 qqsgeslrly nnllildads ardaadqlsg dslsststal iansqvvsgv lgtrlrglld
      721 sgtvrmpama lnlmpttpaa engawvqpfg nwtqldgrdg asglkqstgg vlfgadgsfn
      781 pdwrggiyag ysrskfdadd rdaeghsdny hlglytgaqi dalrlsadvg ytwhkleser
      841 nvafagfsdr ltgkrnaqsl qasgeaayri pvgsvslepf aglsyvryna ddlrekggaa
      901 aldvssdkqn tvfstvglra sthanvanln telygslgwr raygdldprn vqsfaggpnf
      961 evqgvsqtrd taltevgakv rlnkqtdlgl syqgqfgtdt rfhsvnagvt vrf
//
LOCUS       WP_236066651             101 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2515 family protein [Pseudomonas alliivorans].
ACCESSION   WP_236066651
VERSION     WP_236066651.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas alliivorans
  ORGANISM  Pseudomonas alliivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10720.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Pseudomonas alliivorans"
                     /db_xref="taxon:2810613"
     Protein         1..101
                     /product="DUF2515 family protein"
                     /calculated_mol_wt=12070
ORIGIN      
        1 mdlskqflgm gnfwlfqdif vwhwfyinfp hqfneciear dfneyddrfi aafqklprvk
       61 iaipeinalk vtdhlrqgfe likklkppll yqiaepcsfc r
//
LOCUS       WP_236066708              70 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6726 family protein [Paraburkholderia haematera].
ACCESSION   WP_236066708
VERSION     WP_236066708.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia haematera
  ORGANISM  Paraburkholderia haematera
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042577.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20487.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Paraburkholderia haematera"
                     /db_xref="taxon:2793077"
     Protein         1..70
                     /product="DUF6726 family protein"
                     /calculated_mol_wt=6763
     Region          20..70
                     /region_name="DUF6726"
                     /note="Family of unknown function (DUF6726); pfam20487"
                     /db_xref="CDD:466636"
ORIGIN      
        1 mavasrknmr sgrfgrlgal gvmlalcagm tgcglaaapc rvasaglkiv plvghiaaap
       61 tdacadvidp
//
LOCUS       WP_236066732             338 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase [Paraburkholderia haematera].
ACCESSION   WP_236066732
VERSION     WP_236066732.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia haematera
  ORGANISM  Paraburkholderia haematera
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 338)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 338)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Paraburkholderia haematera"
                     /db_xref="taxon:2793077"
     Protein         1..338
                     /product="phosphotransferase"
                     /calculated_mol_wt=37092
     Region          6..>338
                     /region_name="PLN02876"
                     /note="acyl-CoA dehydrogenase"
                     /db_xref="CDD:215473"
ORIGIN      
        1 mnaslqfdie sltryltahv pgfqgpmsvg kfpggqsnpt fllkaqsgry vlrrqppgal
       61 lksahavdre frvlsalgqt pvpvarayhl cedrdvigsl fyvmsfedgr ifwnpalpev
      121 aleergaiyd avlgtmaalh dvdidevgls dygrpgnyfa rqidvwtkqy raaqtdtlea
      181 mesliawlpa hcpaeagkpt lvhgdfridn lifmrdapqv ravldwelst lgnpladiay
      241 fcmclrlppg shiaglegmd raalgvpdea sivrrycelr gissienwnf ylafsffrla
      301 aiaqgvkkra lsgnasneqa rqvgemagvl akmgidli
//
LOCUS       WP_236066803             538 aa            linear   BCT 02-MAR-2025
DEFINITION  tannase/feruloyl esterase family alpha/beta hydrolase
            [Paraburkholderia haematera].
ACCESSION   WP_236066803
VERSION     WP_236066803.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia haematera
  ORGANISM  Paraburkholderia haematera
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 538)
  AUTHORS   de Vries,R.P., vanKuyk,P.A., Kester,H.C. and Visser,J.
  TITLE     The Aspergillus niger faeB gene encodes a second feruloyl esterase
            involved in pectin and xylan degradation and is specifically
            induced in the presence of aromatic compounds
  JOURNAL   Biochem J 363 (Pt 2), 377-386 (2002)
   PUBMED   11931668
REFERENCE   2  (residues 1 to 538)
  AUTHORS   Hatamoto,O., Watarai,T., Kikuchi,M., Mizusawa,K. and Sekine,H.
  TITLE     Cloning and sequencing of the gene encoding tannase and a
            structural study of the tannase subunit from Aspergillus oryzae
  JOURNAL   Gene 175 (1-2), 215-221 (1996)
   PUBMED   8917102
  REMARK    Erratum:[Gene 1997 Feb 20;186(1):153]
REFERENCE   3  (residues 1 to 538)
  AUTHORS   Kroon,P.A., Faulds,C.B. and Williamson,G.
  TITLE     Purification and characterization of a novel esterase induced by
            growth of Aspergillus niger on sugar-beet pulp
  JOURNAL   Biotechnol Appl Biochem 23 (3), 255-262 (1996)
   PUBMED   8679110
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019157.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07519.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Paraburkholderia haematera"
                     /db_xref="taxon:2793077"
     Protein         1..538
                     /product="tannase/feruloyl esterase family alpha/beta
                     hydrolase"
                     /calculated_mol_wt=57187
     Region          69..536
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 milgampgls asvayaaare aplalrcvef agavlppeli alptagvqie saamvaatap
       61 gnqqggeycr itgrikglka stpdirfdln lprrwngral qiggggyngv vvsgtgvmpf
      121 spdraplaqg yatfgddsgh vgnsalaifg lvdeavtnfg hahlkkthdt alaliarayg
      181 rppermyfag gstggregyt vmqrypddyd gvianspaln fsgvrlmgvk lgqaeyatpg
      241 gfippplley vvqrtlavcd rldgaadgiv sdvaacrehe peiiaslrca grapshetcl
      301 tdaqlatllv mrdglslpyr lawgvtgyrg ynvfqgthlt gllglahqpe rlpvpsffan
      361 gylfaqgdgy iryfvtrdaa fdslrfdply pgkyrgqlva lsqtigamnp dlgryiahgg
      421 klitlqglad evispnqtia yyealidrfg vdqvdafmrl ymvpgfqhgs gvfipsvdll
      481 galdnwvtrg vspetltatd iaaatngrsr plcryplfpr ysgkgnvnla ssfacaep
//
LOCUS       WP_236066805              93 aa            linear   BCT 02-MAR-2025
DEFINITION  efflux RND transporter permease subunit [Paraburkholderia
            haematera].
ACCESSION   WP_236066805
VERSION     WP_236066805.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia haematera
  ORGANISM  Paraburkholderia haematera
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 93)
  AUTHORS   Murakami,S., Nakashima,R., Yamashita,E. and Yamaguchi,A.
  TITLE     Crystal structure of bacterial multidrug efflux transporter AcrB
  JOURNAL   Nature 419 (6907), 587-593 (2002)
   PUBMED   12374972
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00873.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Paraburkholderia haematera"
                     /db_xref="taxon:2793077"
     Protein         1..93
                     /product="efflux RND transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=9769
     Region          <6..83
                     /region_name="AcrB"
                     /note="Multidrug efflux pump subunit AcrB [Defense
                     mechanisms]; COG0841"
                     /db_xref="CDD:440603"
ORIGIN      
        1 mlqlvkrnea qglsvvdavr davsvrfrpi lltaltaslg llptalgfgk gaapeqglai
       61 vtlgglvwsg llstnllpal yvykrekllr kis
//
LOCUS       WP_236066828             524 aa            linear   BCT 02-MAR-2025
DEFINITION  tannase/feruloyl esterase family alpha/beta hydrolase
            [Paraburkholderia haematera].
ACCESSION   WP_236066828
VERSION     WP_236066828.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia haematera
  ORGANISM  Paraburkholderia haematera
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 524)
  AUTHORS   de Vries,R.P., vanKuyk,P.A., Kester,H.C. and Visser,J.
  TITLE     The Aspergillus niger faeB gene encodes a second feruloyl esterase
            involved in pectin and xylan degradation and is specifically
            induced in the presence of aromatic compounds
  JOURNAL   Biochem J 363 (Pt 2), 377-386 (2002)
   PUBMED   11931668
REFERENCE   2  (residues 1 to 524)
  AUTHORS   Hatamoto,O., Watarai,T., Kikuchi,M., Mizusawa,K. and Sekine,H.
  TITLE     Cloning and sequencing of the gene encoding tannase and a
            structural study of the tannase subunit from Aspergillus oryzae
  JOURNAL   Gene 175 (1-2), 215-221 (1996)
   PUBMED   8917102
  REMARK    Erratum:[Gene 1997 Feb 20;186(1):153]
REFERENCE   3  (residues 1 to 524)
  AUTHORS   Kroon,P.A., Faulds,C.B. and Williamson,G.
  TITLE     Purification and characterization of a novel esterase induced by
            growth of Aspergillus niger on sugar-beet pulp
  JOURNAL   Biotechnol Appl Biochem 23 (3), 255-262 (1996)
   PUBMED   8679110
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019157.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07519.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Paraburkholderia haematera"
                     /db_xref="taxon:2793077"
     Protein         1..524
                     /product="tannase/feruloyl esterase family alpha/beta
                     hydrolase"
                     /calculated_mol_wt=54843
     Region          37..522
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 msvpassigl pttgaavtaa ttvpasgtga tatgeycmvt gaispvdpaa pkinfqlalp
       61 ttwntkimmf ggggydgtip sptgnvpagp tnqltplgrg yatfasdsgh qanalgskdg
      121 sfgvndeavq nfagdalkkt rdaavylida ryavnaptrs yfaggssggr ealavvqrwp
      181 qdwdgsivly pawnaasldl qfgritrala apgayldqsk rkvlhdtvia acdaldgvad
      241 glisninacn asfnpstatl ngtplrcpgg adtgdtclsd aqigalnvyn tpitfnyala
      301 sgetqypgfn vygadlgvvn asplqptvtt lalgtsqpas pmpntapyms vfwdqwiryf
      361 vtrdpnfnsl tvdpqnpgtl qtrisqltgi qddnktdlsa fnakggkilm ahgmsdvlvs
      421 trsteqyyqr lqstmgvsnv anfvrfyeip gyghavstvy naawdslttm enwvehgttp
      481 ppqvvadtag vpgrtrplce fpswpkyngs gdvntassft catq
//
LOCUS       WP_236066832             247 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Paraburkholderia haematera].
ACCESSION   WP_236066832
VERSION     WP_236066832.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia haematera
  ORGANISM  Paraburkholderia haematera
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 247)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Paraburkholderia haematera"
                     /db_xref="taxon:2793077"
     Protein         1..247
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=26820
     Region          <3..>120
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          64..>232
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            159..189
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 miqqyeqyal aavagsavta llafvahklq strlaarlra eadarieals aehadhgeai
       61 rereqavqem ealaaqlrde lrqqsasvde lratlkaatd gkdqwahhaq qiageaarlk
      121 slgatferwh eqmislmtqn hdmhaknqel ssivrhvviv slnasieaar agpagrgfav
      181 vasevralaa rseelsksyr dslhrndltt tstfqdiqag gkmiaaslss veslanqfhs
      241 klhqvpm
//
LOCUS       WP_236066835             145 aa            linear   BCT 02-MAR-2025
DEFINITION  HipA domain-containing protein [Paraburkholderia haematera].
ACCESSION   WP_236066835
VERSION     WP_236066835.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia haematera
  ORGANISM  Paraburkholderia haematera
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 145)
  AUTHORS   Black,D.S., Irwin,B. and Moyed,H.S.
  TITLE     Autoregulation of hip, an operon that affects lethality due to
            inhibition of peptidoglycan or DNA synthesis
  JOURNAL   J Bacteriol 176 (13), 4081-4091 (1994)
   PUBMED   8021189
REFERENCE   2  (residues 1 to 145)
  AUTHORS   Black,D.S., Kelly,A.J., Mardis,M.J. and Moyed,H.S.
  TITLE     Structure and organization of hip, an operon that affects lethality
            due to inhibition of peptidoglycan or DNA synthesis
  JOURNAL   J Bacteriol 173 (18), 5732-5739 (1991)
   PUBMED   1715862
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019421.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07804.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Paraburkholderia haematera"
                     /db_xref="taxon:2793077"
     Protein         1..145
                     /product="HipA domain-containing protein"
                     /calculated_mol_wt=15746
     Region          <2..136
                     /region_name="HipA-like"
                     /note="serine/threonine-protein kinases similar to HipA
                     and CtkA; cl28916"
                     /db_xref="CDD:355792"
ORIGIN      
        1 mfwllaatdg haknfsifhl pgglyrstpl ydvlsahpii gpgrnqiarq kakmamavrg
       61 sthhylieni hrrhwieqar qvglgsetvq dviaevvdat dqvinevngl vpsefpkgla
      121 esilggvgrq rdrlaasast atnrd
//
LOCUS       WP_236066879             382 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Paraburkholderia haematera].
ACCESSION   WP_236066879
VERSION     WP_236066879.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia haematera
  ORGANISM  Paraburkholderia haematera
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Paraburkholderia haematera"
                     /db_xref="taxon:2793077"
     Protein         1..382
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=42759
     Region          64..344
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mhtismadem rcfkpslprr iavaatrans lrrrgvsgfl tllisavfcc sllssapvva
       61 agnvlrvlaw pgyadadvvk tfearynakv evtwvasdea lwarmhaqgt pqfdvlaant
      121 aeierytran llapldlasl pntkkqlprf qalssieglt saghvyaipf tyssmgliyd
      181 rkqiaiaprs mrelwnpryr gkvldfdsaq hnfsftalal gyphpfqlda tqmrviarkl
      241 vdlrrnllty ytlpeeataf fiqhnvalmf gnygtqqves lrragadvgy vipdegvlaw
      301 ldcwsmtrfa kdrplalawi nymlepdvsa lltqrqglan tltapaengd karivwigpv
      361 ediqrreelw nrivsgdrse rf
//
LOCUS       WP_236066906             181 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4279 domain-containing protein [Paraburkholderia haematera].
ACCESSION   WP_236066906
VERSION     WP_236066906.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia haematera
  ORGANISM  Paraburkholderia haematera
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025471.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14106.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Paraburkholderia haematera"
                     /db_xref="taxon:2793077"
     Protein         1..181
                     /product="DUF4279 domain-containing protein"
                     /calculated_mol_wt=20264
     Region          70..171
                     /region_name="DUF4279"
                     /note="Domain of unknown function (DUF4279); pfam14106"
                     /db_xref="CDD:433720"
ORIGIN      
        1 midlllplrv tasrsgrcws gcwcrpkrrr sggrgsypeg rlittlagfa vrnmsacart
       61 yvtlciygsd adtmnrmade ikmsptrtsn kngllgwffd tkeldsvdva dhldlllrel
      121 eaygvdmkki kemgcwyrty cfwssvsgng gpalgpkqma alasldmelh fdlwfdppee
      181 e
//
LOCUS       WP_236066923             393 aa            linear   BCT 02-MAR-2025
DEFINITION  BamA/TamA family outer membrane protein [Paraburkholderia
            haematera].
ACCESSION   WP_236066923
VERSION     WP_236066923.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia haematera
  ORGANISM  Paraburkholderia haematera
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 393)
  AUTHORS   Heinz,E. and Lithgow,T.
  TITLE     A comprehensive analysis of the Omp85/TpsB protein superfamily
            structural diversity, taxonomic occurrence, and evolution
  JOURNAL   Front Microbiol 5, 370 (2014)
   PUBMED   25101071
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013283.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01103.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Paraburkholderia haematera"
                     /db_xref="taxon:2793077"
     Protein         1..393
                     /product="BamA/TamA family outer membrane protein"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /calculated_mol_wt=42697
     Region          <182..392
                     /region_name="BamA"
                     /note="Outer membrane protein assembly factor BamA [Cell
                     wall/membrane/envelope biogenesis]; COG4775"
                     /db_xref="CDD:443807"
ORIGIN      
        1 mirrflrvpf sdaaaspmkg dghrsrrlca sataaallvm sghghaeskf tdpedgafdm
       61 snlllthsgv lpvptlitep avgyglglgl lyfslpkksa dapddskapp nitglggfat
      121 gshswgaglm hfhtwdddhi rylgvvgkvg lhlnyygiqn qprayqldgi avvqqvlfri
      181 gnshwyvgpr ytffdattrf sstipvsirq fekdqrvakg givvdydtrd nmfypssgty
      241 aeleadlarg glgsstnfqe qtargyqwip lskswvlglr adtgfsqgni pffaqpyvsl
      301 rgvsdakfqd nnqltaeaei rwnvtprwsv lgfggvgkay ghlhsfsdap tafgfgtgfr
      361 yliarklgvs mgidvahgpg qnafyvqvgs awr
//
LOCUS       WP_236067006             534 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Paraburkholderia haematera].
ACCESSION   WP_236067006
VERSION     WP_236067006.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia haematera
  ORGANISM  Paraburkholderia haematera
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Paraburkholderia haematera"
                     /db_xref="taxon:2793077"
     Protein         1..534
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=57643
     Region          47..524
                     /region_name="efflux_EmrB"
                     /note="drug resistance transporter, EmrB/QacA subfamily;
                     TIGR00711"
                     /db_xref="CDD:129794"
ORIGIN      
        1 msdtalpsam paapmaalpl spahtrllll glglatgmef ytfdsmnlvl adltgtlgvs
       61 adeaswlltv yscalflgvp vsvwmaghyg ykrflistiv vfaiasmgca ispnlesmli
      121 wravqglaga glvvwwrasi yvlmakpqrs pslmkastll ylssaagllv sgyitdhfnw
      181 rliflpnlly aagaiwllar yfptlpppas drvirtdwlg iallatalis lqiilnrgei
      241 ddwfgsfhir vlawtsgaal llfiiwqatp anrtpllwlg llrdryvlss aligvftgmi
      301 lsgslfvlpe flrnlsthth satqtgqiic vyaltaaair plmvgliari gqrktivial
      361 vmliasmvlf nrllttdtpg yyyilplily acclspllpa vgsgtvarie qnklldgvsl
      421 ymtfrqfgas lgvalltili ghretlhssr lfehlrhdnp vtrdwlasvs atlvtrggys
      481 pvesqraavk mlaeagahqa atlayadafa fmaavgvial clvpiipptp vakk
//
LOCUS       WP_236067064             196 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Paraburkholderia
            haematera].
ACCESSION   WP_236067064
VERSION     WP_236067064.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia haematera
  ORGANISM  Paraburkholderia haematera
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Paraburkholderia haematera"
                     /db_xref="taxon:2793077"
     Protein         1..196
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=21015
     Region          <44..179
                     /region_name="GlxA"
                     /note="Transcriptional regulator GlxA, contains an amidase
                     domain and an AraC-type DNA-binding HTH domain
                     [Transcription]; COG4977"
                     /db_xref="CDD:444002"
ORIGIN      
        1 mftrtlnaay gneaadfaad ggtaleeadp vadashrlhp dsicdalvar lvaraaertp
       61 ptarrtaslp twrlrraldf ieanlaqpig ladvaastgl trmhfaaqfr sttgysphay
      121 lrqrriahaq mllrssalsv ldvalscgfg shahfttvfg rmvgeppnsw rtrmrgdgpi
      181 mesaeviaar rsdtga
//
LOCUS       WP_236067099              58 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Paraburkholderia haematera].
ACCESSION   WP_236067099
VERSION     WP_236067099.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia haematera
  ORGANISM  Paraburkholderia haematera
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 58)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..58
                     /organism="Paraburkholderia haematera"
                     /db_xref="taxon:2793077"
     Protein         1..>58
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>58
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 makgkfertk phvnvgtigh vdhgkttlta aittvltkkf ggeakaydqi daapeeka
//
LOCUS       WP_236067112             211 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6308 family protein [Streptomyces brasiliscabiei].
ACCESSION   WP_236067112
VERSION     WP_236067112.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces brasiliscabiei
  ORGANISM  Streptomyces brasiliscabiei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 211)
  AUTHORS   Wehmeier,U.F. and Piepersberg,W.
  TITLE     Enzymology of aminoglycoside biosynthesis-deduction from gene
            clusters
  JOURNAL   Methods Enzymol 459, 459-491 (2009)
   PUBMED   19362651
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039405.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19827.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Streptomyces brasiliscabiei"
                     /db_xref="taxon:2736302"
     Protein         1..211
                     /product="DUF6308 family protein"
                     /calculated_mol_wt=22557
     Region          10..202
                     /region_name="DUF6308"
                     /note="Family of unknown function (DUF6308); pfam19827"
                     /db_xref="CDD:437659"
ORIGIN      
        1 msellsaerv vgdlrryfgm ggppggmpft gsrfehlagg gdrlevadri taedlvavqt
       61 lsvtvpasva ldvlegplga rlsgllqavp rdidmadaee avvadgspad rawhllrdqp
      121 dvgwviagkl larkrprlip vydrvvrcav grppsfwlal haalreddga ahrrllelrq
      181 aagvpetvsa lrvcdvavwm ghraeghacp r
//
LOCUS       WP_236066192             117 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ecotin family protein [Prochlorococcus].
ACCESSION   WP_236066192
VERSION     WP_236066192.1
KEYWORDS    RefSeq.
SOURCE      Prochlorococcus
  ORGANISM  Prochlorococcus
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Synechococcales; Prochlorococcaceae.
REFERENCE   1  (residues 1 to 117)
  AUTHORS   Wang,S.X., Esmon,C.T. and Fletterick,R.J.
  TITLE     Crystal structure of thrombin-ecotin reveals conformational changes
            and extended interactions
  JOURNAL   Biochemistry 40 (34), 10038-10046 (2001)
   PUBMED   11513582
REFERENCE   2  (residues 1 to 117)
  AUTHORS   Eggers,C.T., Wang,S.X., Fletterick,R.J. and Craik,C.S.
  TITLE     The role of ecotin dimerization in protease inhibition
  JOURNAL   J Mol Biol 308 (5), 975-991 (2001)
   PUBMED   11352586
REFERENCE   3  (residues 1 to 117)
  AUTHORS   Yang,S.Q., Wang,C.I., Gillmor,S.A., Fletterick,R.J. and Craik,C.S.
  TITLE     Ecotin: a serine protease inhibitor with two distinct and
            interacting binding sites
  JOURNAL   J Mol Biol 279 (4), 945-957 (1998)
   PUBMED   9642073
REFERENCE   4  (residues 1 to 117)
  AUTHORS   McGrath,M.E., Gillmor,S.A. and Fletterick,R.J.
  TITLE     Ecotin: lessons on survival in a protease-filled world
  JOURNAL   Protein Sci 4 (2), 141-148 (1995)
   PUBMED   7757004
REFERENCE   5  (residues 1 to 117)
  AUTHORS   McGrath,M.E., Erpel,T., Bystroff,C. and Fletterick,R.J.
  TITLE     Macromolecular chelation as an improved mechanism of protease
            inhibition: structure of the ecotin-trypsin complex
  JOURNAL   EMBO J 13 (7), 1502-1507 (1994)
   PUBMED   8156987
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03974.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Prochlorococcus"
                     /db_xref="taxon:1218"
     Protein         1..117
                     /product="ecotin family protein"
                     /GO_function="GO:0004867 - serine-type endopeptidase
                     inhibitor activity [Evidence IEA]"
                     /calculated_mol_wt=12878
     Region          9..>90
                     /region_name="Ecotin"
                     /note="Protease Inhibitor Ecotin; homodimeric protease
                     inhibitor; cl00178"
                     /db_xref="CDD:469642"
ORIGIN      
        1 mavfiqtrsl fwllallats gaapvgaipr ldltayplpa qdqqrwliql pgllprssdp
       61 avssnpadwr vqlivgqnvq ldcnqqslvg hrlrmmrlng mtrkelflip phvsvcl
//
LOCUS       WP_236067377             247 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Streptomyces brasiliscabiei].
ACCESSION   WP_236067377
VERSION     WP_236067377.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces brasiliscabiei
  ORGANISM  Streptomyces brasiliscabiei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 247)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Streptomyces brasiliscabiei"
                     /db_xref="taxon:2736302"
     Protein         1..247
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=25899
     Region          17..229
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mtamrpaaln sgpaappvrv lladddallr tgvavtlgta pdlvvvgeaa dgvravelch
       61 altpdvvlmd vrmpgvdgie atarivaagl aarvlvlttf pddayvwral ragasgfllk
      121 raaperlida vrtvaagdtl ldpsvtralv erfvldgrtg rtdpdaadra rlrgltarea
      181 qvlrliaegl snaelagllg iaestakthv krilhkidar draqavvlay rsglmerrdd
      241 rpapgfg
//
LOCUS       WP_236067394             171 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase, partial [Klebsiella variicola].
ACCESSION   WP_236067394
VERSION     WP_236067394.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella variicola
  ORGANISM  Klebsiella variicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 171)
  AUTHORS   de la Cruz,J., Kressler,D. and Linder,P.
  TITLE     Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and
            related families
  JOURNAL   Trends Biochem Sci 24 (5), 192-198 (1999)
   PUBMED   10322435
REFERENCE   2  (residues 1 to 171)
  AUTHORS   Aubourg,S., Kreis,M. and Lecharny,A.
  TITLE     The DEAD box RNA helicase family in Arabidopsis thaliana
  JOURNAL   Nucleic Acids Res 27 (2), 628-636 (1999)
   PUBMED   9862990
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012492.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00270.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Klebsiella variicola"
                     /db_xref="taxon:244366"
     Protein         <1..171
                     /product="DEAD/DEAH box helicase"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          47..>159
                     /region_name="BRR2"
                     /note="Replicative superfamily II helicase [Replication,
                     recombination and repair]; COG1204"
                     /db_xref="CDD:440817"
ORIGIN      
        1 lhynalvnhl iralglypyi qtdtadwhdr liydlfkvdv gltnpitlhr eqslilkrll
       61 sgedlaisap tsfgksfiid afialknpnn vliivptisl tdetrrrlhr kfsseykiit
      121 tadvelsekn ififpqerai sylekiqsld lfiidefyka sekhvkiehq p
//
LOCUS       WP_236067406             394 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Streptomyces brasiliscabiei].
ACCESSION   WP_236067406
VERSION     WP_236067406.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces brasiliscabiei
  ORGANISM  Streptomyces brasiliscabiei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024816.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13424.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Streptomyces brasiliscabiei"
                     /db_xref="taxon:2736302"
     Protein         1..394
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=42449
     Region          <54..326
                     /region_name="FxSxx_TPR"
                     /note="FxSxx-COOH system tetratricopeptide repeat protein;
                     NF040586"
                     /db_xref="CDD:468560"
ORIGIN      
        1 mygkafapey qgalttlsvn ssltevlaag trqlreaera gehgeaarsg lavaeahrrl
       61 gqigeadraw kasyraaraa gdegamawal wsggtlarqr gsfalarrll glaadlgerg
      121 gdvvvrgysl aglaetgriq gdyeavaqlh eqllaearrr gearhtvwal egiaqihrqr
      181 gsydsayamf eeaagiaaga ddrrghawal rgladivsar dgdveralal lseaevvcra
      241 mrlssalayn hkmrgnvlyr agrhaeardt yelalaefre mseprgeala rlglakslar
      301 lgrsraetaa elddlareld riglrharqm varardelgl ldddapgpra qdrliahdrt
      361 dpgdparpge rtrpgdpadg dartdrgvra eavr
//
LOCUS       WP_236067614             471 aa            linear   BCT 02-MAR-2025
DEFINITION  metallopeptidase TldD-related protein [Streptomyces
            brasiliscabiei].
ACCESSION   WP_236067614
VERSION     WP_236067614.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces brasiliscabiei
  ORGANISM  Streptomyces brasiliscabiei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 471)
  AUTHORS   Ghilarov,D., Serebryakova,M., Stevenson,C.E.M., Hearnshaw,S.J.,
            Volkov,D.S., Maxwell,A., Lawson,D.M. and Severinov,K.
  TITLE     The Origins of Specificity in the Microcin-Processing Protease
            TldD/E
  JOURNAL   Structure 25 (10), 1549-1561 (2017)
   PUBMED   28943336
REFERENCE   2  (residues 1 to 471)
  AUTHORS   Hu,Y., Peng,N., Han,W., Mei,Y., Chen,Z., Feng,X., Liang,Y.X. and
            She,Q.
  TITLE     An archaeal protein evolutionarily conserved in prokaryotes is a
            zinc-dependent metalloprotease
  JOURNAL   Biosci Rep 32 (6), 609-618 (2012)
   PUBMED   22950735
REFERENCE   3  (residues 1 to 471)
  AUTHORS   Allali,N., Afif,H., Couturier,M. and Van Melderen,L.
  TITLE     The highly conserved TldD and TldE proteins of Escherichia coli are
            involved in microcin B17 processing and in CcdA degradation
  JOURNAL   J Bacteriol 184 (12), 3224-3231 (2002)
   PUBMED   12029038
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039907.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19289.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Streptomyces brasiliscabiei"
                     /db_xref="taxon:2736302"
     Protein         1..471
                     /product="metallopeptidase TldD-related protein"
                     /calculated_mol_wt=49091
     Region          222..463
                     /region_name="PmbA_TldD_C"
                     /note="PmbA/TldA metallopeptidase C-terminal domain;
                     pfam19289"
                     /db_xref="CDD:437121"
ORIGIN      
        1 mntplppqei veralslsra ahcdvivddt dtawlrwagd eitangasgt rrvtvisagp
       61 gggaavsgtv gdrhhleelv raseaptdap aaaggtgtea pepirgdgaf dtaglpeavp
      121 ardrlsalip elvrargrsq galhgfaqhr tgtawlgtsa gvrrrhrlgt stldlyartp
      181 dgsrtawaga vadgfhgmdl pgleaattgr vrqplphrel ppgryevlla paavadlmta
      241 lyraggaada aegrtvfarp gggtrigdtl aalplnlrgd prepglecrp fvlshgavsd
      301 afgeavqaga dpadngmpla atywmkdgvl tslsasrada arlglpvrpa vgnlvldgga
      361 drslaemirs trrallvgcl wyirptdagt ltltgltrdg vhlvedgrvt ayvndfrfae
      421 spvsllsrav eagrterapa resgmhfprt ampplrvpdf rftaqapsad g
//
LOCUS       WP_236067643             431 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Streptomyces brasiliscabiei].
ACCESSION   WP_236067643
VERSION     WP_236067643.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces brasiliscabiei
  ORGANISM  Streptomyces brasiliscabiei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024917.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13527.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Streptomyces brasiliscabiei"
                     /db_xref="taxon:2736302"
     Protein         1..431
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /calculated_mol_wt=47272
     Region          1..431
                     /region_name="PRK01346"
                     /note="enhanced intracellular survival protein Eis"
                     /db_xref="CDD:234945"
ORIGIN      
        1 mvtevrpprr demagyyral pfanglpswe padaawhggp epwppqrtpa saeqlekwsa
       61 adikdesfhp iatfvdgrcv gasaaisfev tvpgggvgrm agvtatgvia thrrrgylrk
      121 mmqamfeaal ergeplamls asegsiygrf gfspatyrtr welarheaal lpaepdpgsl
      181 elvdaaeakk awprvhadvr aqrvgelnpl pgrwdglsda adgtngplrf lahrdqhgdv
      241 dgmanfrlpw sptadragtl vvealeatnp vayralwgll idfdltktvv apgrprdepl
      301 rwmltnpram rvtrqtdnlw arlldvpral tqrsyvtpge lrftidddqm crannrtwhi
      361 kadgpvvtcv ptdetadlti rlaalsslyf ggmsahhlay aghinghtns aigqlarmfr
      421 tdpephnsfg f
//
LOCUS       WP_236067773             839 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase [Streptomyces brasiliscabiei].
ACCESSION   WP_236067773
VERSION     WP_236067773.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces brasiliscabiei
  ORGANISM  Streptomyces brasiliscabiei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 839)
  AUTHORS   de la Cruz,J., Kressler,D. and Linder,P.
  TITLE     Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and
            related families
  JOURNAL   Trends Biochem Sci 24 (5), 192-198 (1999)
   PUBMED   10322435
REFERENCE   2  (residues 1 to 839)
  AUTHORS   Aubourg,S., Kreis,M. and Lecharny,A.
  TITLE     The DEAD box RNA helicase family in Arabidopsis thaliana
  JOURNAL   Nucleic Acids Res 27 (2), 628-636 (1999)
   PUBMED   9862990
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012492.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00270.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Streptomyces brasiliscabiei"
                     /db_xref="taxon:2736302"
     Protein         1..839
                     /product="DEAD/DEAH box helicase"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=88052
     Region          2..345
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     Region          <451..631
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          743..>820
                     /region_name="PLN02967"
                     /note="kinase"
                     /db_xref="CDD:215521"
ORIGIN      
        1 mtlpvaltgt dvigqaktgt gktlgfglpl lervvvpadv eagrakpedl vdspqalvvv
       61 ptrelctqvt ndlltagkvr nvrvtaiygg rayepqveal kkgvdvvigt pgrlldlagq
      121 kklnlkhvkc lvldeademl dlgflpdvek iinmlparrq tmlfsatmpg aviglarrym
      181 sqpthirata pddegatvrn tsqhiyrahn mdkpelvari lqadgrglam vfcrtkrtaa
      241 dladqlkqrg fasgavhgdl gqgareqalr afrngkvdvl vctdvaargi dvegvthvin
      301 yqspedekty lhrigrtgra gakgiaitlv dwddiprwql inkaldlgfn dppetystsp
      361 hlfeelsipa gtkgvlprse rtragldaee ledlgepggh gprgrggrgs gsgggsgssg
      421 pstaererer partprrrrr trggatldgv speaaavtep sasapsaqps gtdsaesesr
      481 tprrrrrtra gvnpgaeaav etveaeestp aaraeavves vagtptsapv dapaesvega
      541 akprrrrtrk sveavesaav aevapsaeaa vdtaegtvga epvaeaaakp rrrtrkvaap
      601 veaapvetvv eeavaeeapa kprrrtrkaa eavveavdst etavdtaaea tkprrrtrka
      661 aaapaevvve avaeeaavap rrrtrkaaav apaaevavdt aegagaeava eeapakprrr
      721 trkaaapvet vveeavaeea pakprrrtrk ateaaveavd gaetavdtae aakprrrtrk
      781 aaapaeagvp aqpteeqatk prrtrkaava avvedggaea paprrrtrka vaavegteg
//
LOCUS       WP_236067827             236 aa            linear   BCT 02-MAR-2025
DEFINITION  thioredoxin domain-containing protein [Streptomyces
            brasiliscabiei].
ACCESSION   WP_236067827
VERSION     WP_236067827.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces brasiliscabiei
  ORGANISM  Streptomyces brasiliscabiei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024853.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13462.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Streptomyces brasiliscabiei"
                     /db_xref="taxon:2736302"
     Protein         1..236
                     /product="thioredoxin domain-containing protein"
                     /calculated_mol_wt=25565
     Region          39..215
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 mavalglllg gcgerpasae qkpaygdlre lpeeldadgt tirvgdpdap vtlrlyedlr
       61 cpvceefert ggpaarqrtl grsvvteytl asflddrlgg sgskkavnal raaleedkfa
      121 eyhavlyenq peeiidgftd vyllelaaev eglrgpafds avrtmkyrdf varsekafer
      181 vasgtptavi ngngireaya gvlyeeaafg rlldavetdp dgweeyvpms edmgtn
//
LOCUS       WP_236067965             630 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphatidylglycerol lysyltransferase domain-containing protein
            [Streptomyces brasiliscabiei].
ACCESSION   WP_236067965
VERSION     WP_236067965.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces brasiliscabiei
  ORGANISM  Streptomyces brasiliscabiei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 630)
  AUTHORS   Ernst,C.M., Slavetinsky,C.J., Kuhn,S., Hauser,J.N., Nega,M.,
            Mishra,N.N., Gekeler,C., Bayer,A.S. and Peschel,A.
  TITLE     Gain-of-Function Mutations in the Phospholipid Flippase MprF Confer
            Specific Daptomycin Resistance
  JOURNAL   mBio 9 (6), e01659-18 (2018)
   PUBMED   30563904
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 630)
  AUTHORS   Maloney,E., Stankowska,D., Zhang,J., Fol,M., Cheng,Q.J., Lun,S.,
            Bishai,W.R., Rajagopalan,M., Chatterjee,D. and Madiraju,M.V.
  TITLE     The two-domain LysX protein of Mycobacterium tuberculosis is
            required for production of lysinylated phosphatidylglycerol and
            resistance to cationic antimicrobial peptides
  JOURNAL   PLoS Pathog 5 (7), e1000534 (2009)
   PUBMED   19649276
REFERENCE   3  (residues 1 to 630)
  AUTHORS   Staubitz,P., Neumann,H., Schneider,T., Wiedemann,I. and Peschel,A.
  TITLE     MprF-mediated biosynthesis of lysylphosphatidylglycerol, an
            important determinant in staphylococcal defensin resistance
  JOURNAL   FEMS Microbiol Lett 231 (1), 67-71 (2004)
   PUBMED   14769468
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021445.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09924.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Streptomyces brasiliscabiei"
                     /db_xref="taxon:2736302"
     Protein         1..630
                     /product="phosphatidylglycerol lysyltransferase
                     domain-containing protein"
                     /calculated_mol_wt=68227
     Region          145..>626
                     /region_name="class_II_aaRS-like_core"
                     /note="Class II tRNA amino-acyl synthetase-like catalytic
                     core domain. Class II amino acyl-tRNA synthetases (aaRS)
                     share a common fold and generally attach an amino acid to
                     the 3' OH of ribose of the appropriate tRNA. PheRS is an
                     exception in that it attaches...; cl00268"
                     /db_xref="CDD:444800"
ORIGIN      
        1 msggvpdrsd qsdrsnpstr pdkadragrl psgavrrgyg avrgalsgpr peavpalvar
       61 actlvglvdi aagvfprfrn srmhtlaevl pgalgpfaaa lslsagvlll llahglrrrk
      121 rrawraavfl lpagaiaqft yrhslvgvlv slalliplvr hrdefralpd prsrwralan
      181 fvlmgagsiv lgllvvsahp grmvgdpsla drlehvlygl fgfegpvdya gttswtvafs
      241 lgalglltai ttvylafrpe hpaarltadd evrlralldr hggrdslghf alrrdkavvf
      301 spsgkaavty rvvsgvmlas gdpigdieaw pgaierfmde akahswtpav mgcsetgaev
      361 wtretglaal elgdeavvdv adfslagram rnvrqmvkri erlgyetrvr rvrdlgeael
      421 erirraaedw rgtdtergfs malgrvgdpa dgdcliatah kadeipgayg dlkavlhfvp
      481 wgpdgasldl mrrdrsadpg mnellivaal qaaprlgvrq vslnfamfrs alargekiga
      541 gpvlrawrgl lvflsrwfqi eslykfnakf rprweprfvv yassrdlpri gfaamqaegf
      601 vnlalprvlr rrakppapca havrsasnav
//
LOCUS       WP_236068047             141 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Streptomyces brasiliscabiei].
ACCESSION   WP_236068047
VERSION     WP_236068047.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces brasiliscabiei
  ORGANISM  Streptomyces brasiliscabiei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Streptomyces brasiliscabiei"
                     /db_xref="taxon:2736302"
     Protein         1..141
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=15145
     Region          <66..138
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mrffqppges psgtpahash eavretssrv rwshrchred ggktraalng qerarrphph
       61 arqgvgarqi tvnsvapgfv ktdlnrqpws ppeneaahas lsvfgrmgqp tdvadivall
      121 tsddarwitg rriaasggtg l
//
LOCUS       WP_236068117             304 aa            linear   BCT 02-MAR-2025
DEFINITION  histidine kinase, partial [Streptomyces brasiliscabiei].
ACCESSION   WP_236068117
VERSION     WP_236068117.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces brasiliscabiei
  ORGANISM  Streptomyces brasiliscabiei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   Grebe,T.W. and Stock,J.B.
  TITLE     The histidine protein kinase superfamily
  JOURNAL   Adv Microb Physiol 41, 139-227 (1999)
   PUBMED   10500846
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019350.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07730.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Streptomyces brasiliscabiei"
                     /db_xref="taxon:2736302"
     Protein         <1..>304
                     /product="histidine kinase"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
     Region          <12..>211
                     /region_name="UhpB"
                     /note="Signal transduction histidine kinase UhpB,
                     glucose-6-phosphate specific [Signal transduction
                     mechanisms]; COG3851"
                     /db_xref="CDD:443060"
     Region          147..>295
                     /region_name="ComP"
                     /note="Signal transduction histidine kinase ComP [Signal
                     transduction mechanisms]; COG4585"
                     /db_xref="CDD:443642"
ORIGIN      
        1 patlrlqlna lqslarqtfa vrlitltigt pfamanttdg pqshavltaa vlgitvsyam
       61 lrdwdrfapr llghptlmal dllfgavlll taspasplay atvctpllsg llygwrgagv
      121 ltglqlavll tvhrtwehrp gagastllia gfcvaagvig vtlrnlmfrf gtatqalsea
      181 tsrlavaeav eserarlare lhdsvaktlh glalaadala ttsdrpdpdp alvrrqatlv
      241 asaarraaae srdlltdlrr htdlttptpa tdlgaeltir ttdfttrtal pprvthtcll
      301 yttp
//
LOCUS       WP_236068119             240 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Streptomyces
            brasiliscabiei].
ACCESSION   WP_236068119
VERSION     WP_236068119.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces brasiliscabiei
  ORGANISM  Streptomyces brasiliscabiei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 240)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Streptomyces brasiliscabiei"
                     /db_xref="taxon:2736302"
     Protein         1..>240
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          23..>235
                     /region_name="EntF"
                     /note="seryl-AMP synthase component of non-ribosomal
                     peptide synthetase [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG1020"
                     /db_xref="CDD:440643"
ORIGIN      
        1 mqpmkpmnpn psrrgnappl thhrtgidee ltatlretaa rhgvslfhll laaygrclar
       61 wsgretvavn vararrespl pgidrlvgpl adtlpvfvdi dpaepvtala drlrriwrea
      121 eahatlsstd farllsevrp vtgpaprtaa eagfsfarfp vvhgpdwpvt vtptaaatas
      181 aatrlgllcw esdsalrlsw nypahlfrpe tvsrladeyv telratvaqs pqepltlihn
//
LOCUS       WP_236068131             171 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein, partial [Streptomyces
            brasiliscabiei].
ACCESSION   WP_236068131
VERSION     WP_236068131.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces brasiliscabiei
  ORGANISM  Streptomyces brasiliscabiei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Streptomyces brasiliscabiei"
                     /db_xref="taxon:2736302"
     Protein         <1..171
                     /product="phosphopantetheine-binding protein"
     Region          <5..>150
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
ORIGIN      
        1 pdhrevrafl artlppymlp arvhflpalp ltgtgkidrn hltttatpat papgiaagtp
       61 qggappatpt ehllartwsa lldvpepeis reddffilgg dsitvlemfs rlrdefpalp
      121 rpttvythrt ltalaaaidd tapapapals vlniseptrq eaksdwgvgv e
//
LOCUS       WP_236068160              93 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1016 N-terminal domain-containing protein, partial [Streptomyces
            brasiliscabiei].
ACCESSION   WP_236068160
VERSION     WP_236068160.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces brasiliscabiei
  ORGANISM  Streptomyces brasiliscabiei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036995.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17761.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Streptomyces brasiliscabiei"
                     /db_xref="taxon:2736302"
     Protein         1..>93
                     /product="DUF1016 N-terminal domain-containing protein"
     Region          22..>93
                     /region_name="HTH_ParB"
                     /note="HTH domain found in ParB protein; cl40613"
                     /db_xref="CDD:477411"
ORIGIN      
        1 mtnsspislt dppggytdwl aelkarihya qqravqvvnr elvllywqig rdilvrqrre
       61 gwgakvidrl ahdlrtafpd mkgfsranlm ymr
//
LOCUS       WP_236068313             462 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Citreicoccus inhibens].
ACCESSION   WP_236068313
VERSION     WP_236068313.1
KEYWORDS    RefSeq.
SOURCE      Citreicoccus inhibens
  ORGANISM  Citreicoccus inhibens
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Citreicoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Citreicoccus inhibens"
                     /db_xref="taxon:2849499"
     Protein         1..462
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=48093
     Region          30..369
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(34..35,38..39,42,73,125..126,128..130,139,159,
                     162..163,167,244,247..248,251..253,256,284,288,339..340,
                     344,348,364,367..368)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mgapppgaak argitrgrlr qslrvsvteg mfaevftaca gatvltawav alklgpflvg
       61 vmtalpffaq fvqfpaawlt ggfghrrval aavclsrlvm fplalvpwld wglvatqrll
      121 laiagasavl gvvgnnawva wmgelvphav rgrffgrrta lttlagtvvs laagglmdrl
      181 rpdggvgval pllalvgcgi giittllmal qhdpappgpl paramqaalq plkdvrvrgv
      241 lvyqvawnaa vgvsapffal hslqnlqmtf vlmalhaaav aavriltvpw wgqvidrvga
      301 qpvllgcslg igvipalwll psadclwplv fdavlagalw gghalaifal pltvapregr
      361 pfylaafata gglaytaaaa lgggiaarlp atftlgglpw vnlhvlfvls svarlaaall
      421 vthvdepgar pvrslgallp rwltrpafdt alarsrarap rr
//
LOCUS       WP_236068918              58 aa            linear   BCT 02-MAR-2025
DEFINITION  M57 family metalloprotease [Citreicoccus inhibens].
ACCESSION   WP_236068918
VERSION     WP_236068918.1
KEYWORDS    RefSeq.
SOURCE      Citreicoccus inhibens
  ORGANISM  Citreicoccus inhibens
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Citreicoccus.
REFERENCE   1  (residues 1 to 58)
  AUTHORS   Quillet,L., Bensmail,L., Barray,S. and Guespin-Michel,J.
  TITLE     Cloning and sequencing of two genes, prtA and prtB, from Myxococcus
            xanthus, encoding PrtA and PrtB proteases, both of which are
            required for the protease activity
  JOURNAL   Gene 198 (1-2), 135-140 (1997)
   PUBMED   9370274
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023805.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12388.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..58
                     /organism="Citreicoccus inhibens"
                     /db_xref="taxon:2849499"
     Protein         1..58
                     /product="M57 family metalloprotease"
                     /calculated_mol_wt=5442
     Region          <7..52
                     /region_name="ZnMc"
                     /note="Zinc-dependent metalloprotease. This super-family
                     of metalloproteases contains two major branches, the
                     astacin-like proteases and the adamalysin/reprolysin-like
                     proteases. Both branches have wide phylogenetic
                     distribution, and contain sub-families, which...; cl00064"
                     /db_xref="CDD:469599"
ORIGIN      
        1 mhevppgpag vgaidipgpp ttavvggslm nscccsaetg gfapgdlsal raqctess
//
LOCUS       WP_236068995             110 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: CopD family protein [Prochlorococcus].
ACCESSION   WP_236068995
VERSION     WP_236068995.1
KEYWORDS    RefSeq.
SOURCE      Prochlorococcus
  ORGANISM  Prochlorococcus
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Synechococcales; Prochlorococcaceae.
REFERENCE   1  (residues 1 to 110)
  AUTHORS   Cooksey,D.A.
  TITLE     Molecular mechanisms of copper resistance and accumulation in
            bacteria
  JOURNAL   FEMS Microbiol Rev 14 (4), 381-386 (1994)
   PUBMED   7917425
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017262.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05425.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Prochlorococcus"
                     /db_xref="taxon:1218"
     Protein         1..110
                     /product="CopD family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=12050
ORIGIN      
        1 msqvrsfekm feplrvtsla iqvisglwlt wiylpggrgl ftfqtpitsl lttklillai
       61 afalalhaqi rlipnlsddn lielswhirs ittvsiafvi vgagirlggf
//
LOCUS       WP_236069229             361 aa            linear   BCT 02-MAR-2025
DEFINITION  FliM/FliN family flagellar motor switch protein [Citreicoccus
            inhibens].
ACCESSION   WP_236069229
VERSION     WP_236069229.1
KEYWORDS    RefSeq.
SOURCE      Citreicoccus inhibens
  ORGANISM  Citreicoccus inhibens
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Citreicoccus.
REFERENCE   1  (residues 1 to 361)
  AUTHORS   Paul,K. and Blair,D.F.
  TITLE     Organization of FliN subunits in the flagellar motor of Escherichia
            coli
  JOURNAL   J Bacteriol 188 (7), 2502-2511 (2006)
   PUBMED   16547037
REFERENCE   2  (residues 1 to 361)
  AUTHORS   Brown,P.N., Mathews,M.A., Joss,L.A., Hill,C.P. and Blair,D.F.
  TITLE     Crystal structure of the flagellar rotor protein FliN from
            Thermotoga maritima
  JOURNAL   J Bacteriol 187 (8), 2890-2902 (2005)
   PUBMED   15805535
REFERENCE   3  (residues 1 to 361)
  AUTHORS   Chen,L.M., Kaniga,K. and Galan,J.E.
  TITLE     Salmonella spp. are cytotoxic for cultured macrophages
  JOURNAL   Mol Microbiol 21 (5), 1101-1115 (1996)
   PUBMED   8885278
REFERENCE   4  (residues 1 to 361)
  AUTHORS   Bischoff,D.S. and Ordal,G.W.
  TITLE     Identification and characterization of FliY, a novel component of
            the Bacillus subtilis flagellar switch complex
  JOURNAL   Mol Microbiol 6 (18), 2715-2723 (1992)
   PUBMED   1447979
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013236.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01052.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Citreicoccus inhibens"
                     /db_xref="taxon:2849499"
     Protein         1..361
                     /product="FliM/FliN family flagellar motor switch protein"
                     /calculated_mol_wt=37996
     Region          64..359
                     /region_name="SpaO_YscQ"
                     /note="type III secretion system apparatus protein
                     YscQ/HrcQ; TIGR02551"
                     /db_xref="CDD:274196"
ORIGIN      
        1 mrkltrahqi lsqrpdvaaf gdaalrvace altreldvev taearvlesa lvpatglgtg
       61 nvfavlelsa vggvavlele palvfsalgr lagagrravp ldsltrlees tlvflllavl
      121 satraqgslh dllgprllav strgeavvar mesrrrhvgi alrvrlgdvv ggarfvlpah
      181 slqvalqtlp qgpgreplpq wlslavparc ragrsrlspg aletlrsgdv ivfegvhrea
      241 ghlrgpgrll tsgfflsgsf qsdgfslnra hsgaspqeld maavsesseg mpplpvdvei
      301 elarvmlplt elmgmrpgvl vplhinasdp vllrvgerav araelvdieg evgarilall
      361 p
//
LOCUS       WP_236069011             111 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GRAM domain-containing protein [Prochlorococcus].
ACCESSION   WP_236069011
VERSION     WP_236069011.1
KEYWORDS    RefSeq.
SOURCE      Prochlorococcus
  ORGANISM  Prochlorococcus
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Synechococcales; Prochlorococcaceae.
REFERENCE   1  (residues 1 to 111)
  AUTHORS   Doerks,T., Strauss,M., Brendel,M. and Bork,P.
  TITLE     GRAM, a novel domain in glucosyltransferases, myotubularins and
            other putative membrane-associated proteins
  JOURNAL   Trends Biochem Sci 25 (10), 483-485 (2000)
   PUBMED   11050430
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014892.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02893.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Prochlorococcus"
                     /db_xref="taxon:1218"
     Protein         1..111
                     /product="GRAM domain-containing protein"
                     /calculated_mol_wt=12481
     Region          5..95
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
ORIGIN      
        1 mktvleagek lvkksqanhq rgietvggml ylttarlife shalniqtgv tifsiseinr
       61 lrkewtkflg fipifpntla vtsssghedk fillrrtpwi neinklkegq n
//
LOCUS       WP_236069332             251 aa            linear   BCT 02-MAR-2025
DEFINITION  Imm49 family immunity protein [Citreicoccus inhibens].
ACCESSION   WP_236069332
VERSION     WP_236069332.1
KEYWORDS    RefSeq.
SOURCE      Citreicoccus inhibens
  ORGANISM  Citreicoccus inhibens
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Citreicoccus.
REFERENCE   1  (residues 1 to 251)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026913.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15575.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Citreicoccus inhibens"
                     /db_xref="taxon:2849499"
     Protein         1..251
                     /product="Imm49 family immunity protein"
                     /calculated_mol_wt=27930
     Region          <83..223
                     /region_name="Imm49"
                     /note="Immunity protein 49; pfam15575"
                     /db_xref="CDD:434794"
ORIGIN      
        1 msvfidnalg dneeklaaft agqgglkeal qfsqnfriag igsllmsgta trfheclhas
       61 arafayflrs apdsqkltsr sapffdavac edieaarela rhsprcpdra reyeedflfv
      121 rflmdfffqg msvneglnll ehyetilegt qdirltvcra flasdsagfd ealsnmmeer
      181 nmrvqkmrdq eaaaeeslst egylsvegva lvrlalsrgl tpsghylsvp tvaceppllr
      241 yredvwrnml a
//
LOCUS       WP_236069506             454 aa            linear   BCT 02-MAR-2025
DEFINITION  FG-GAP-like repeat-containing protein, partial [Citreicoccus
            inhibens].
ACCESSION   WP_236069506
VERSION     WP_236069506.1
KEYWORDS    RefSeq.
SOURCE      Citreicoccus inhibens
  ORGANISM  Citreicoccus inhibens
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Citreicoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13517.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Citreicoccus inhibens"
                     /db_xref="taxon:2849499"
     Protein         1..>454
                     /product="FG-GAP-like repeat-containing protein"
     Region          77..223
                     /region_name="ZnMc"
                     /note="Zinc-dependent metalloprotease. This super-family
                     of metalloproteases contains two major branches, the
                     astacin-like proteases and the adamalysin/reprolysin-like
                     proteases. Both branches have wide phylogenetic
                     distribution, and contain sub-families, which...; cl00064"
                     /db_xref="CDD:469599"
     Site            order(176..177,180,186)
                     /site_type="active"
                     /db_xref="CDD:239806"
     Region          271..336
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          326..391
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          381..446
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
ORIGIN      
        1 mlfaklairp feresrmkkt palivlssll vmhgallstg cgpdgqlqmp nehaqhisad
       61 arelyvdtts lwqspvisvc wenstaanat ergwvkaavl gtwvdvssvn figweactsi
      121 srgirisiad tgphtkglga rldgyregmv lnftfanwsp icqssrefci raiavhefgh
      181 algfaheqnr pdrpssctep eqgsngnlmi gawdlasvmn ycnpdwngng klsatdiagi
      241 vqlygerpwl rdfgfdsggw rverhprvsa dvngdgradi igfadagvtv alstgtgfaq
      301 pqlwladfgy naggwlverh prvsadvngd gradiigfsd agvlvalstg tgfaqprlwl
      361 adfgynaggw lvekhprvla dvngdgradi igfsdagvlv alstgtgfaq prlwladfgy
      421 naggwlverh prvsadvngd gradiigfsd agvl
//
LOCUS       WP_236069534             480 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidoglycan-binding protein [Citreicoccus inhibens].
ACCESSION   WP_236069534
VERSION     WP_236069534.1
KEYWORDS    RefSeq.
SOURCE      Citreicoccus inhibens
  ORGANISM  Citreicoccus inhibens
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Citreicoccus.
REFERENCE   1  (residues 1 to 480)
  AUTHORS   Briers,Y., Volckaert,G., Cornelissen,A., Lagaert,S., Michiels,C.W.,
            Hertveldt,K. and Lavigne,R.
  TITLE     Muralytic activity and modular structure of the endolysins of
            Pseudomonas aeruginosa bacteriophages phiKZ and EL
  JOURNAL   Mol Microbiol 65 (5), 1334-1344 (2007)
   PUBMED   17697255
REFERENCE   2  (residues 1 to 480)
  AUTHORS   Gooley,P.R., O'Connell,J.F., Marcy,A.I., Cuca,G.C., Salowe,S.P.,
            Bush,B.L., Hermes,J.D., Esser,C.K., Hagmann,W.K., Springer,J.P. et
            al.
  TITLE     The NMR structure of the inhibited catalytic domain of human
            stromelysin-1
  JOURNAL   Nat Struct Biol 1 (2), 111-118 (1994)
   PUBMED   7656014
REFERENCE   3  (residues 1 to 480)
  AUTHORS   Foster,S.J.
  TITLE     Cloning, expression, sequence analysis and biochemical
            characterization of an autolytic amidase of Bacillus subtilis 168
            trpC2
  JOURNAL   J Gen Microbiol 137 (8), 1987-1998 (1991)
   PUBMED   1683402
REFERENCE   4  (residues 1 to 480)
  AUTHORS   Dideberg,O., Charlier,P., Dive,G., Joris,B., Frere,J.M. and
            Ghuysen,J.M.
  TITLE     Structure of a Zn2+-containing D-alanyl-D-alanine-cleaving
            carboxypeptidase at 2.5 A resolution
  JOURNAL   Nature 299 (5882), 469-470 (1982)
   PUBMED   7121588
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013625.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01471.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Citreicoccus inhibens"
                     /db_xref="taxon:2849499"
     Protein         1..480
                     /product="peptidoglycan-binding protein"
                     /calculated_mol_wt=50425
     Region          1..148
                     /region_name="GEWL"
                     /note="Goose egg-white lysozyme; cd01021"
                     /db_xref="CDD:381601"
     Site            order(37,60..62,65..66,84,88,112..113,115)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:381601"
     Region          210..275
                     /region_name="PGRP"
                     /note="Peptidoglycan-binding (PGRP) domain of
                     peptidoglycan hydrolases [Cell wall/membrane/envelope
                     biogenesis]; COG3409"
                     /db_xref="CDD:442635"
ORIGIN      
        1 maqtdlarlk kytagieaaa kkydlppall aaiasresra gaaldrsgrg dngngfglmq
       61 vdqryhkpqg gpysnehieq aagilkgmln evkkkhpdwp pvqqlrgava aynsgtgnvr
      121 tlknmdvgtt gndysndvwa raqalaphfg gaatpgtntg ivpnkpspgt ntgivpnkpg
      181 vkpahvhdgf ettgahkwtp apslhdvkeg kktlhegmqg pavkhlqqml gvpadgkfgp
      241 vtkkavadfq raaglkpgag aegyvgkatl aalekkaaqg thgkpgtvts qstssqgtpt
      301 qetkvsgavl gngvrintnd ptlkklataa lrngetgycv kttldnmhrl gipntpaatg
      361 ndpnnprggm aqmlrhgwes ipfpgarqqt ihsnygdaka nvvsaaqykk lvaegkvpdg
      421 aiifqtrhgw dysggskgnd mgivrnngrt thnyqdmssi iysdckdvvi lvpksaiqrs
//
LOCUS       WP_236069637             591 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Citreicoccus
            inhibens].
ACCESSION   WP_236069637
VERSION     WP_236069637.1
KEYWORDS    RefSeq.
SOURCE      Citreicoccus inhibens
  ORGANISM  Citreicoccus inhibens
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Citreicoccus.
REFERENCE   1  (residues 1 to 591)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Citreicoccus inhibens"
                     /db_xref="taxon:2849499"
     Protein         1..>591
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..119
                     /region_name="PRK12316"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237054"
     Region          139..564
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation (C) domain of non-ribosomal
                     peptide synthetases(NRPSs) and similar domains including
                     the C-domain of SgcC5, a free-standing NRPS with both
                     ester- and amide- bond forming activity; cd19531"
                     /db_xref="CDD:380454"
ORIGIN      
        1 mvpswvvvle alpltpngkv drralpepea qpsaeslrnh vpprtatelr vaelfervlg
       61 iervgangsf felgghslla tqlvsrvrqa feielplrel ftsptvaals erieraarvr
      121 gkthvpalqp rvsrvasppl sfaqqrlwfl erlspgtafy nlpiavdllg pldavalrra
      181 feavvlrhea lrttfqveng qpvqhiesap giafsvrnle shptsereaa aqdcvereaq
      241 lpfdlehgpl irmtllrlse qvhvlvlvth hivsdgwsne ifvreltafy eafvdghasp
      301 lpalslqyad fstwqrdwlq gepleaqlah wrqqlkgapr alelptdrpr paaqtfrgan
      361 ihvawpkslw remeglgrre gatvfmvlla ayqallsryt gqrdvsvgsp iagrthaete
      421 gvigffvntl vlrarlsrdm tfrellaqvr evtlgayahq dvpfeklvee lqperdlsrs
      481 plfqvsltlq ntpaaqvhlr qglriqgrat sehtskfems llveelperv avvanynsdl
      541 fdaetvegll ghlrvlveaa varpeekvre lplmgeeerr rvveewsgkr v
//
LOCUS       WP_236069733             396 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Prochlorococcus marinus].
ACCESSION   WP_236069733
VERSION     WP_236069733.1
KEYWORDS    RefSeq.
SOURCE      Prochlorococcus marinus
  ORGANISM  Prochlorococcus marinus
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Synechococcales; Prochlorococcaceae; Prochlorococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024806.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13414.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Prochlorococcus marinus"
                     /db_xref="taxon:1219"
     Protein         1..396
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=44287
     Region          15..43
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(16,19..20,23..24,26,50,53..54,57..58,60..61,84,
                     87..88,91..92,95)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          18..48
                     /region_name="TPR_1"
                     /note="Tetratricopeptide repeat; pfam00515"
                     /db_xref="CDD:459840"
     Region          42..251
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          48..78
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          83..111
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          117..144
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          151..179
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          185..212
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          243..>382
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          251..279
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(252,255..256,259..260,262,286,289..290,293..294,
                     296..297,320,323..324,327..328,331)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          284..314
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          319..346
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          353..379
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 manessnhsv seqtandyfk egekrfhlkd yqgaidcysk aieinpnnai aynnrgnvkd
       61 elgdyqsamn dynkaidins ldasfyinrg vvkrhsnnie gaiddytkai eldpqhatay
      121 ynrgiakvnl sdnkgaifdy tkaltvnprh aksyynrais knnindikga isdytkaiea
      181 mpvfasayyn rgnlmerlgr rqaavtdhek alvikpqllt amnergenkn lvenkivndl
      241 nneedrsqld afnyysqgna eqkrgnnqsa idcytkaiev nphyaeayny rglanynlcd
      301 yqaalddynk aieinsiyed ayigcglaks alsdyqgaig ayervlvinp knvaayrnrg
      361 iakelegnle gacsdwrqas slgdedaaew vkaqcf
//
LOCUS       WP_236069873             385 aa            linear   BCT 02-MAR-2025
DEFINITION  trypsin-like peptidase domain-containing protein [Prochlorococcus
            marinus].
ACCESSION   WP_236069873
VERSION     WP_236069873.1
KEYWORDS    RefSeq.
SOURCE      Prochlorococcus marinus
  ORGANISM  Prochlorococcus marinus
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Synechococcales; Prochlorococcaceae; Prochlorococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024758.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13365.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Prochlorococcus marinus"
                     /db_xref="taxon:1219"
     Protein         1..385
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /calculated_mol_wt=40533
     Region          50..382
                     /region_name="HhoA_HhoB_HtrA"
                     /note="HhoA/HhoB/HtrA family serine endopeptidase;
                     NF041521"
                     /db_xref="CDD:469406"
ORIGIN      
        1 misfrlllqq gcivlkrfwg lflmsvlfpl aagvqpvwal sgldgttshn fvadavsqva
       61 pavvridter tvqrqpfdpt lidpllrdll gepgigpere rgqgsgvvid dqglvltnah
      121 vvervdavsv tladgdqhdg svvgtdpvtd lalvrldggt rpeaaplgds dalevgdwai
      181 algtpygler tvtlgivssl hrnisslgfs dkrldliqtd aainpgnsgg plvngrgevi
      241 gintlvrsgp gaglgfaipi nlarhvseql ltsgevvhpy lgvqlvplta riarehnrdp
      301 nslvelperl galvqsvlpd spaeraglrr gdlviaaaet svsdpqmllk qvdqaeigvp
      361 fslrimrngq emslsvnpaa lpgls
//
LOCUS       WP_236069899             133 aa            linear   BCT 02-MAR-2025
DEFINITION  c-type cytochrome [Prochlorococcus marinus].
ACCESSION   WP_236069899
VERSION     WP_236069899.1
KEYWORDS    RefSeq.
SOURCE      Prochlorococcus marinus
  ORGANISM  Prochlorococcus marinus
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Synechococcales; Prochlorococcaceae; Prochlorococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012264.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00034.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Prochlorococcus marinus"
                     /db_xref="taxon:1219"
     Protein         1..133
                     /product="c-type cytochrome"
                     /GO_function="GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=14214
     Region          25..132
                     /region_name="CytM"
                     /note="Cytochrome cM [Energy production and conversion];
                     COG5676"
                     /db_xref="CDD:444390"
ORIGIN      
        1 mfhapeltvt gpssnnqskn gligalvvlv aavciaillw vlghsqrdpy inatldlegs
       61 leqggrlfri ncagchgita qgnlgpnlld vserrndaql irqvvsgntp pmprfqlepq
      121 emadllayln slk
//
LOCUS       WP_236069957              78 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6447 family protein [Prochlorococcus marinus].
ACCESSION   WP_236069957
VERSION     WP_236069957.1
KEYWORDS    RefSeq.
SOURCE      Prochlorococcus marinus
  ORGANISM  Prochlorococcus marinus
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Synechococcales; Prochlorococcaceae; Prochlorococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040107.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20045.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Prochlorococcus marinus"
                     /db_xref="taxon:1219"
     Protein         1..78
                     /product="DUF6447 family protein"
                     /calculated_mol_wt=8556
     Region          1..75
                     /region_name="DUF6447"
                     /note="Family of unknown function (DUF6447); pfam20045"
                     /db_xref="CDD:437877"
ORIGIN      
        1 mtdssanksd pvltfegkry dlnalpdelk elirgmqvad aqlrmhedtl kvlavgrqtl
       61 amqlneklkd vspmpdas
//
LOCUS       WP_236070049             207 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein, partial [Paraburkholderia
            nemoris].
ACCESSION   WP_236070049
VERSION     WP_236070049.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia nemoris
  ORGANISM  Paraburkholderia nemoris
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Paraburkholderia nemoris"
                     /db_xref="taxon:2793076"
     Protein         1..>207
                     /product="phosphopantetheine-binding protein"
     Region          2..>207
                     /region_name="PRK12316"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237054"
ORIGIN      
        1 mpspyndger lyrsgdlcrl radgcieylg rldqqvklrg yrielgeiea qlrgcagveq
       61 avvalrgege rrrlvaywvg eaqapqlqaa lqsklpgymv pggwmklarl pvmangkldr
      121 galpapqede awqavaprta retqmreiwa svlgreaqql gvtqnffeag gdsivslqli
      181 akarqaglkl tpkqvfdhpt ieaqarv
//
LOCUS       WP_236070054             394 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding protein [Prochlorococcus sp. MIT 1318].
ACCESSION   WP_236070054
VERSION     WP_236070054.1
KEYWORDS    RefSeq.
SOURCE      Prochlorococcus sp. MIT 1318
  ORGANISM  Prochlorococcus sp. MIT 1318
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Synechococcales; Prochlorococcaceae; Prochlorococcus.
REFERENCE   1  (residues 1 to 394)
  AUTHORS   Mattevi,A., Fraaije,M.W., Mozzarelli,A., Olivi,L., Coda,A. and van
            Berkel,W.J.
  TITLE     Crystal structures and inhibitor binding in the octameric
            flavoenzyme vanillyl-alcohol oxidase: the shape of the active-site
            cavity controls substrate specificity
  JOURNAL   Structure 5 (7), 907-920 (1997)
   PUBMED   9261083
REFERENCE   2  (residues 1 to 394)
  AUTHORS   Benson,T.E., Walsh,C.T. and Hogle,J.M.
  TITLE     The structure of the substrate-free form of MurB, an essential
            enzyme for the synthesis of bacterial cell walls
  JOURNAL   Structure 4 (1), 47-54 (1996)
   PUBMED   8805513
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013714.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01565.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Prochlorococcus sp. MIT 1318"
                     /db_xref="taxon:3082531"
     Protein         1..394
                     /product="FAD-binding protein"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=43086
     Region          7..113
                     /region_name="FAD_binding_4"
                     /note="FAD binding domain; pfam01565"
                     /db_xref="CDD:426326"
     Region          8..391
                     /region_name="GlcD"
                     /note="FAD/FMN-containing lactate dehydrogenase/glycolate
                     oxidase [Energy production and conversion]; COG0277"
                     /db_xref="CDD:440046"
ORIGIN      
        1 mrslqlkrkp livcsggtts rcaaeghwtl dlrqscrqih fdpstqhvei gagqtmesll
       61 relakhgrsf ptglsglpgl gyiltggvsp lsrsqglaid qileikgvwg dgesfvlsnp
      121 eaaccsedql awrglcgaap flavitdlkl qthllqplri wqsrltfeql lelihqaesw
      181 pdslslqwiw gdeihaygvm landaaavat fnqlqkttlc tnvveiddva gihelppfal
      241 pvvsnavigr chsevvallg pawgsacqgv italaelmae rpdprcslav qqlggvasrq
      301 hkdvsslihr eaiwkpwita awpagdihir alslnwlekv wetlepycag vhlaqmhphl
      361 pwhqrelkaa fgewlpglqe lkarhdpngv lpsl
//
LOCUS       WP_236070166             456 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: aminotransferase class III-fold pyridoxal
            phosphate-dependent enzyme [Prochlorococcus].
ACCESSION   WP_236070166
VERSION     WP_236070166.1
KEYWORDS    RefSeq.
SOURCE      Prochlorococcus
  ORGANISM  Prochlorococcus
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Synechococcales; Prochlorococcaceae.
REFERENCE   1  (residues 1 to 456)
  AUTHORS   Shen,B.W., Hennig,M., Hohenester,E., Jansonius,J.N. and Schirmer,T.
  TITLE     Crystal structure of human recombinant ornithine aminotransferase
  JOURNAL   J Mol Biol 277 (1), 81-102 (1998)
   PUBMED   9514741
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012428.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00202.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Prochlorococcus"
                     /db_xref="taxon:1218"
     Protein         1..456
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /calculated_mol_wt=51053
     Region          40..405
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(132..133,222,250,253,277..278)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:99735"
     Site            278
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99735"
ORIGIN      
        1 mtikkiresl lnshstkgid lwnkasevvl ggcgllskrp tryssrtwpt ymkeskdifi
       61 ksldnityad ftefsigccl lgyrskshns ilkllkkqsp lstllspyep elafklneff
      121 sesrvwkfcr gggealaita rlaraistnt rilvcgyhgt hdwylssnls ikdglsqifl
      181 kgitpngiph eysgttinis qlnaqtiehs iqshhpgiif feacryklld qncvkllqkf
      241 qneggilvad evtsgfrfns klatfecgii pdfivlgksl gngyaisavg alkkyhdnlq
      301 ecflsstywt esiglragil tleafndwet iisqlntngm iihdminkaf nasrlqvtin
      361 niptminfei lpqlgftsie lrtllisrml klgflfstti ypsirhtrhy shrfgsalss
      421 vcsqlgddml dnssllriel ekigpveqgf srtqkl
//
LOCUS       WP_236070249             491 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: FAD-linked oxidase C-terminal domain-containing
            protein [Prochlorococcus].
ACCESSION   WP_236070249
VERSION     WP_236070249.1
KEYWORDS    RefSeq.
SOURCE      Prochlorococcus
  ORGANISM  Prochlorococcus
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Synechococcales; Prochlorococcaceae.
REFERENCE   1  (residues 1 to 491)
  AUTHORS   Mattevi,A., Fraaije,M.W., Coda,A. and van Berkel,W.J.
  TITLE     Crystallization and preliminary X-ray analysis of the flavoenzyme
            vanillyl-alcohol oxidase from Penicillium simplicissimum
  JOURNAL   Proteins 27 (4), 601-603 (1997)
   PUBMED   9141139
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02913.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Prochlorococcus"
                     /db_xref="taxon:1218"
     Protein         1..491
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=52575
     Region          48..459
                     /region_name="glcD"
                     /note="glycolate oxidase, subunit GlcD; TIGR00387"
                     /db_xref="CDD:273050"
ORIGIN      
        1 mvshdwtald rdlrrflpkk svvskrqell vydcdgltid rhcpplavlp etteevsqil
       61 acchrygipf vargsgtgls ggalveqeal lvvtsrmrri lsmdldnhti tvqpgvinsw
      121 vtravagegf yyapdpssqv vcsiggnvae nsggvhclky gvtsnhvlgl evvladgtvt
      181 llggglseha eldlrgafig segtlgiata itlrllrapq hvtvlladfp tmesageavc
      241 qvtaagvlpa gmeimdnfmi navndlfgfd eyprdaaavl lieldgqaae vtvaadqasg
      301 lcskagarti rraeeaadra llwkgrksaf aavgqispty yvqdgvvprs tlprvlmaie
      361 rlsreyelpv anvfhagdgn lhplilynad tpdvesrvrd lgsailrecl dvggsitgeh
      421 gvgadkrcyl dwmfaaddls tmkllrrafd pdgranpdki fptpkscges arrqviltse
      481 glempseaka f
//
LOCUS       WP_236070298             359 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein
            [Prochlorococcus marinus].
ACCESSION   WP_236070298
VERSION     WP_236070298.1
KEYWORDS    RefSeq.
SOURCE      Prochlorococcus marinus
  ORGANISM  Prochlorococcus marinus
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Synechococcales; Prochlorococcaceae; Prochlorococcus.
REFERENCE   1  (residues 1 to 359)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Prochlorococcus marinus"
                     /db_xref="taxon:1219"
     Protein         1..359
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=38900
     Region          25..344
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Region          <177..230
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
ORIGIN      
        1 mggmnlkrrl svaalivmat psplqamalr vgvsgsppfv dkkagvyegi svevwrqiah
       61 aekleyflip ypnidsnika vadgkidlai gpisitpdrv arngieftqp yfyaeegvlv
      121 psqppglwvr ikplfgvaal ssitfllftl fcvgnliwla erkrnpehfp pqyikglgng
      181 iwfalvtltt vgygdraplt kagrsiagvw mvislvsvst itaglasaft vslsqtqlsg
      241 vmkpsdldge ligvvtgttg vslarsygar pfpvptlkea ihlikrnkvs gvisdtpils
      301 yymknnpdks ltlapfrlsl qtygfvvpsd splerlinie llrlershqv kaisdrllk
//
LOCUS       WP_236070299             301 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: NAD-dependent epimerase/dehydratase family protein
            [Prochlorococcus].
ACCESSION   WP_236070299
VERSION     WP_236070299.1
KEYWORDS    RefSeq.
SOURCE      Prochlorococcus
  ORGANISM  Prochlorococcus
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Synechococcales; Prochlorococcaceae.
REFERENCE   1  (residues 1 to 301)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Prochlorococcus"
                     /db_xref="taxon:1218"
     Protein         1..301
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=33359
     Region          2..295
                     /region_name="PLN00016"
                     /note="RNA-binding protein; Provisional"
                     /db_xref="CDD:215029"
ORIGIN      
        1 mggtrfvgkp lvtrlqaqgh altlftrgrh slpdgvehls gdrttpegls rlqgrsfdvi
       61 vdssgrkled sqrvvactge pkhrflyvss agvyadseew plneesatdp nsrhagkaqt
      121 eswllqqgip ftsfrptyiy gpgnynpier wffdrivhnr pvplprdgtt itqlghvvdl
      181 anamvrslev etatnriync sskrgitfrg liaaaaracg kdpnavelrs fdpsglnpka
      241 rkafplrlsh fltditrver elawqprfdl etgledsycn dyslkptaep dfsadqslig
      301 v
//
LOCUS       WP_236070336              78 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6447 family protein [Prochlorococcus].
ACCESSION   WP_236070336
VERSION     WP_236070336.1
KEYWORDS    RefSeq.
SOURCE      Prochlorococcus
  ORGANISM  Prochlorococcus
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Synechococcales; Prochlorococcaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040107.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20045.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Prochlorococcus"
                     /db_xref="taxon:1218"
     Protein         1..78
                     /product="DUF6447 family protein"
                     /calculated_mol_wt=8596
     Region          1..75
                     /region_name="DUF6447"
                     /note="Family of unknown function (DUF6447); pfam20045"
                     /db_xref="CDD:437877"
ORIGIN      
        1 mtdsaanksd pvltfegkry dlnslpdelk elirgmqvad aqlrmhedtl kvlavgrqtl
       61 amqlneklkd vspipdes
//
LOCUS       WP_236070337             545 aa            linear   BCT 02-MAR-2025
DEFINITION  SBBP repeat-containing protein, partial [Prochlorococcus marinus].
ACCESSION   WP_236070337
VERSION     WP_236070337.1
KEYWORDS    RefSeq.
SOURCE      Prochlorococcus marinus
  ORGANISM  Prochlorococcus marinus
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Synechococcales; Prochlorococcaceae; Prochlorococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018449.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06739.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Prochlorococcus marinus"
                     /db_xref="taxon:1219"
     Protein         1..>545
                     /product="SBBP repeat-containing protein"
     Region          26..58
                     /region_name="SBBP"
                     /note="Beta-propeller repeat; pfam06739"
                     /db_xref="CDD:115400"
     Region          96..415
                     /region_name="Vgb"
                     /note="Streptogramin lyase [Defense mechanisms]; COG4257"
                     /db_xref="CDD:443399"
ORIGIN      
        1 mvasnpnqnd lnldgqkavd gvtkawtqll gtpssdypka lttgsdgsiy iagsthgnld
       61 geinsgggda fltkydsdgt kdwtqllgtt lgdygyaltt gsdgsiyiag sttgdldget
      121 nngsidaflt kydsdgtkdw tqlfgttsyd yatalttgsd gsiyisgyth gnldgeinsg
      181 ggdafltkyd pdgtkdwtql lgttsyddar alttgsdgsi yiagitggdl egevnigttg
      241 trdggldafl tkynpdgtkd wtqllgslhh gdwptsgdya yalttgsdgs iyiagdtsgd
      301 ldeetnngsv dafltkydsd gtkdwtnllg tsssdwatal ttgrdgsiyi agstrgdldg
      361 eansgssdaf ltkydpdgtk dwtqlfgtts gdnayalttg sdgsiyiagn tngdldgetn
      421 sgnadafltk fvnqsklevs yelrkakrkd gssstetdgi aletdvdtti redplkstai
      481 kgigatdnda yildilaknv aqgytlestd itlkfntdlf gsidkdqiql sslfpvanai
      541 hidnr
//
LOCUS       WP_236070417              66 aa            linear   BCT 02-MAR-2025
DEFINITION  pentapeptide repeat-containing protein [Prochlorococcus sp. MIT
            1318].
ACCESSION   WP_236070417
VERSION     WP_236070417.1
KEYWORDS    RefSeq.
SOURCE      Prochlorococcus sp. MIT 1318
  ORGANISM  Prochlorococcus sp. MIT 1318
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Synechococcales; Prochlorococcaceae; Prochlorococcus.
REFERENCE   1  (residues 1 to 66)
  AUTHORS   Bateman,A., Murzin,A.G. and Teichmann,S.A.
  TITLE     Structure and distribution of pentapeptide repeats in bacteria
  JOURNAL   Protein Sci 7 (6), 1477-1480 (1998)
   PUBMED   9655353
REFERENCE   2  (residues 1 to 66)
  AUTHORS   Kieselbach,T., Mant,A., Robinson,C. and Schroder,W.P.
  TITLE     Characterisation of an Arabidopsis cDNA encoding a thylakoid lumen
            protein related to a novel 'pentapeptide repeat' family of proteins
  JOURNAL   FEBS Lett 428 (3), 241-244 (1998)
   PUBMED   9654141
REFERENCE   3  (residues 1 to 66)
  AUTHORS   Black,K., Buikema,W.J. and Haselkorn,R.
  TITLE     The hglK gene is required for localization of heterocyst-specific
            glycolipids in the cyanobacterium Anabaena sp. strain PCC 7120
  JOURNAL   J Bacteriol 177 (22), 6440-6448 (1995)
   PUBMED   7592418
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013003.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00805.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Prochlorococcus sp. MIT 1318"
                     /db_xref="taxon:3082531"
     Protein         1..66
                     /product="pentapeptide repeat-containing protein"
                     /calculated_mol_wt=7182
     Region          <5..66
                     /region_name="YjbI"
                     /note="Uncharacterized conserved protein YjbI, contains
                     pentapeptide repeats [Function unknown]; COG1357"
                     /db_xref="CDD:440968"
ORIGIN      
        1 mhrcclrgvi aassrwhhtr lveanfrsgl dqltdlgkad fnnadlgyal lqranlhgan
       61 lfgccl
//
LOCUS       WP_236070496             394 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidoglycan-binding protein [Streptomyces polyasparticus].
ACCESSION   WP_236070496
VERSION     WP_236070496.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces polyasparticus
  ORGANISM  Streptomyces polyasparticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 394)
  AUTHORS   Briers,Y., Volckaert,G., Cornelissen,A., Lagaert,S., Michiels,C.W.,
            Hertveldt,K. and Lavigne,R.
  TITLE     Muralytic activity and modular structure of the endolysins of
            Pseudomonas aeruginosa bacteriophages phiKZ and EL
  JOURNAL   Mol Microbiol 65 (5), 1334-1344 (2007)
   PUBMED   17697255
REFERENCE   2  (residues 1 to 394)
  AUTHORS   Gooley,P.R., O'Connell,J.F., Marcy,A.I., Cuca,G.C., Salowe,S.P.,
            Bush,B.L., Hermes,J.D., Esser,C.K., Hagmann,W.K., Springer,J.P. et
            al.
  TITLE     The NMR structure of the inhibited catalytic domain of human
            stromelysin-1
  JOURNAL   Nat Struct Biol 1 (2), 111-118 (1994)
   PUBMED   7656014
REFERENCE   3  (residues 1 to 394)
  AUTHORS   Foster,S.J.
  TITLE     Cloning, expression, sequence analysis and biochemical
            characterization of an autolytic amidase of Bacillus subtilis 168
            trpC2
  JOURNAL   J Gen Microbiol 137 (8), 1987-1998 (1991)
   PUBMED   1683402
REFERENCE   4  (residues 1 to 394)
  AUTHORS   Dideberg,O., Charlier,P., Dive,G., Joris,B., Frere,J.M. and
            Ghuysen,J.M.
  TITLE     Structure of a Zn2+-containing D-alanyl-D-alanine-cleaving
            carboxypeptidase at 2.5 A resolution
  JOURNAL   Nature 299 (5882), 469-470 (1982)
   PUBMED   7121588
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013625.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01471.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Streptomyces polyasparticus"
                     /db_xref="taxon:2767826"
     Protein         1..394
                     /product="peptidoglycan-binding protein"
                     /calculated_mol_wt=40213
     Region          86..390
                     /region_name="AcrA"
                     /note="Multidrug efflux pump subunit AcrA (membrane-fusion
                     protein) [Cell wall/membrane/envelope biogenesis, Defense
                     mechanisms]; COG0845"
                     /db_xref="CDD:440606"
ORIGIN      
        1 mgesvvenad mtagqspaqp aeetagdgfv hspepvrprr rrgfalavav avlatagalt
       61 aaalglggae qggteqstlp pataevtrgt lkdtesvdgq lgygaattat arkpgtltag
      121 pdtgdritrg kslyavdgap vtlmygatpa yrdllegveg pdvqqleknl dtlgytgftv
      181 deeftsgtad avrawqedrg ldetgqvplg qvvfadgavr idslaarkgd alqpgaevla
      241 ytgteravtt eldaadeqva kegakvsvrl pddtlaagkv tevttvikpa eaqgqdpetk
      301 ievvvsfadd kgrkaadaya laavhvdfta etredvltvp vaallalaeg gfgvevvkgs
      361 tttyvpvttg lfadgrveis gdgitagtkv gvpk
//
LOCUS       WP_236070922             302 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6457 domain-containing protein [Streptomyces polyasparticus].
ACCESSION   WP_236070922
VERSION     WP_236070922.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces polyasparticus
  ORGANISM  Streptomyces polyasparticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040429.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20058.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Streptomyces polyasparticus"
                     /db_xref="taxon:2767826"
     Protein         1..302
                     /product="DUF6457 domain-containing protein"
                     /calculated_mol_wt=31075
     Region          1..207
                     /region_name="MobA"
                     /note="Molybdopterin-guanine dinucleotide biosynthesis
                     protein A [Coenzyme transport and metabolism]; COG0746"
                     /db_xref="CDD:440509"
     Region          211..293
                     /region_name="DUF6457"
                     /note="Domain of unknown function (DUF6457); pfam20058"
                     /db_xref="CDD:437890"
ORIGIN      
        1 mtsydavvla ggaakrlggv dkpavqvggr alldrvltac aaagttvvva pprptvrpvv
       61 wareepaggg plaalaagve algprtaess alvlvlsadl pflaeqtvdl llgalhaaek
      121 aaetpldgal ftdpggrdqp lvavyrrsal rhgldrlrae hggcggltgl plrllttgla
      181 ltrvsepegs raafdcdtwe diaaararir ehervldewi tavkdelgld ldvdtallld
      241 lardaahgva rpaaplttfl vgyaaaragg gpeavaeatr kavalaarwa dedrpdskpd
      301 ae
//
LOCUS       WP_236071087              92 aa            linear   BCT 02-MAR-2025
DEFINITION  H-NS family nucleoid-associated regulatory protein
            [Paraburkholderia domus].
ACCESSION   WP_236071087
VERSION     WP_236071087.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia domus
  ORGANISM  Paraburkholderia domus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 92)
  AUTHORS   Shindo,H., Iwaki,T., Ieda,R., Kurumizaka,H., Ueguchi,C., Mizuno,T.,
            Morikawa,S., Nakamura,H. and Kuboniwa,H.
  TITLE     Solution structure of the DNA binding domain of a
            nucleoid-associated protein, H-NS, from Escherichia coli
  JOURNAL   FEBS Lett 360 (2), 125-131 (1995)
   PUBMED   7875316
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013014.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00816.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Paraburkholderia domus"
                     /db_xref="taxon:2793075"
     Protein         1..92
                     /product="H-NS family nucleoid-associated regulatory
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0030527 - structural constituent of
                     chromatin [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=9797
     Region          <1..60
                     /region_name="Hns"
                     /note="DNA-binding protein H-NS [Transcription]; COG2916"
                     /db_xref="CDD:442160"
ORIGIN      
        1 makvgikvgd vaaaiaeert rqksaryrsa fgdswdgkgd mpqwlmqats agqslahfav
       61 eksstsssrg rpaidwsrdp fagtrlatir ps
//
LOCUS       WP_236071157             148 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Paraburkholderia
            domus].
ACCESSION   WP_236071157
VERSION     WP_236071157.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia domus
  ORGANISM  Paraburkholderia domus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Paraburkholderia domus"
                     /db_xref="taxon:2793075"
     Protein         1..>148
                     /product="DUF6531 domain-containing protein"
     Region          98..>148
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
ORIGIN      
        1 mrankppygp agnlarllva fmlllvafsa nadyqndctt ryaksgaiqg skfcaidaas
       61 nspggpggya clndldlink wcagetdpqp ekscpvadpv ypgsgavtld stdfvsgddm
      121 pmvfsrtyrs vspgtsgnam gpvwfhnw
//
LOCUS       WP_236071167             139 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1214 domain-containing protein [Paraburkholderia domus].
ACCESSION   WP_236071167
VERSION     WP_236071167.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia domus
  ORGANISM  Paraburkholderia domus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018452.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06742.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Paraburkholderia domus"
                     /db_xref="taxon:2793075"
     Protein         1..139
                     /product="DUF1214 domain-containing protein"
                     /calculated_mol_wt=14650
     Region          <40..137
                     /region_name="COG5361"
                     /note="Uncharacterized conserved protein [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:444136"
ORIGIN      
        1 mndgtsifig tlvpsghplw sdsataprgg lddavpsggi paqafwsvsl yavdkdgqfl
       61 aanpinryqi ssrtpglvvn adgsvdiwlq aqrpmdaqaa nwlptpadgr hftlfaraye
      121 ptgsvltgtf kmppvellp
//
LOCUS       WP_236070968             112 aa            linear   BCT 02-MAR-2025
DEFINITION  STAS domain-containing protein [Streptomyces polyasparticus].
ACCESSION   WP_236070968
VERSION     WP_236070968.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces polyasparticus
  ORGANISM  Streptomyces polyasparticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 112)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The STAS domain - a link between anion transporters and
            antisigma-factor antagonists
  JOURNAL   Curr Biol 10 (2), R53-R55 (2000)
   PUBMED   10662676
REFERENCE   2  (residues 1 to 112)
  AUTHORS   Kovacs,H., Comfort,D., Lord,M., Campbell,I.D. and Yudkin,M.D.
  TITLE     Solution structure of SpoIIAA, a phosphorylatable component of the
            system that regulates transcription factor sigmaF of Bacillus
            subtilis
  JOURNAL   Proc Natl Acad Sci U S A 95 (9), 5067-5071 (1998)
   PUBMED   9560229
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013868.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01740.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Streptomyces polyasparticus"
                     /db_xref="taxon:2767826"
     Protein         1..112
                     /product="STAS domain-containing protein"
                     /calculated_mol_wt=12481
     Region          14..92
                     /region_name="STAS"
                     /note="Sulphate Transporter and Anti-Sigma factor
                     antagonist domain found in the C-terminal region of
                     sulphate transporters as well as in bacterial and archaeal
                     proteins involved in the regulation of sigma factors;
                     cl00604"
                     /db_xref="CDD:445002"
     Site            order(19,21..23,29,53,55..57,59..61,64..65,90..91,93)
                     /site_type="active"
                     /note="anti sigma factor interaction site [active]"
                     /db_xref="CDD:132914"
     Site            56
                     /site_type="other"
                     /note="regulatory phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:132914"
ORIGIN      
        1 mrmcpdlfee crlvrargel dlttvdsfaq alrasratag spfllvdlsl vsfmdgsvla
       61 pldeswadce rrrgwvrvvy lhrtglvfra sgdearfpry ancrnawqgl aa
//
LOCUS       WP_236071182             425 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Paraburkholderia domus].
ACCESSION   WP_236071182
VERSION     WP_236071182.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia domus
  ORGANISM  Paraburkholderia domus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Paraburkholderia domus"
                     /db_xref="taxon:2793075"
     Protein         1..425
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=43059
     Region          25..409
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(34..35,38..39,42,74,124..125,127..129,132,152,
                     155..156,159,243,246..247,250..252,255,282,286,336..337,
                     341,345,361,364..365,368..369,372)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340923"
ORIGIN      
        1 mkpvspvqia splsvvdakl wmlglvcfcv mavdgfdtaa iayvaptlar ewniahaalt
       61 pafvatsiga vlgyvssgal varlgrrrli vlaivafall slgttlagsi msisvirlvt
      121 avclgwavpa tisciadhag eqtraaatia attglsagag lggllaslli ahhgwqsvfi
      181 aggilplall pfvwvalggt dhrqhadass ygvvtqdsak sssiaalfhg qfafqtiviw
      241 siafvaflvt yqfmfwvptl lvsygfspas aalgsaanai ggiagnmall lfvgrygvqr
      301 slmvtaclai gcivclgllt vegsavllli vgvgagttsa cvgqatlavm ayppalrttg
      361 vgcaaaagrv gavvgpaigg illtlgfapq rivlvsclpi flivgllais qfqsrraerv
      421 cagid
//
LOCUS       WP_236071362             153 aa            linear   BCT 02-MAR-2025
DEFINITION  barstar family protein [Streptomyces polyasparticus].
ACCESSION   WP_236071362
VERSION     WP_236071362.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces polyasparticus
  ORGANISM  Streptomyces polyasparticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Buckle,A.M., Schreiber,G. and Fersht,A.R.
  TITLE     Protein-protein recognition: crystal structural analysis of a
            barnase-barstar complex at 2.0-A resolution
  JOURNAL   Biochemistry 33 (30), 8878-8889 (1994)
   PUBMED   8043575
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013500.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01337.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Streptomyces polyasparticus"
                     /db_xref="taxon:2767826"
     Protein         1..153
                     /product="barstar family protein"
                     /calculated_mol_wt=16680
     Region          59..128
                     /region_name="Barstar_like"
                     /note="Barstar is an intracellular inhibitor of barnase,
                     an extracellular ribonuclease of Bacillus
                     amyloliquefaciens. Barstar binds tightly to the barnase
                     active site and sterically blocks it, thus inhibiting its
                     potentially lethal RNase activity inside the...; cl01048"
                     /db_xref="CDD:470045"
     Site            order(86,88,90..92,96)
                     /site_type="other"
                     /note="RNAase interaction site [polypeptide binding]"
                     /db_xref="CDD:240166"
ORIGIN      
        1 mitlaaafwe lhrtgrlnrn gmwggldaqg rrawlsvalc amtyqrrkrp adappgqvft
       61 ldgrhitdid glycalgeav ngpggyfgwn ldavndclrg rfgattpftl rwlnseaats
      121 alishdtadr egaadlevll qifsehdvdv lmc
//
LOCUS       WP_236071441             562 aa            linear   BCT 02-MAR-2025
DEFINITION  hydantoinase B/oxoprolinase family protein [Paraburkholderia
            domus].
ACCESSION   WP_236071441
VERSION     WP_236071441.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia domus
  ORGANISM  Paraburkholderia domus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 562)
  AUTHORS   Watabe,K., Ishikawa,T., Mukohara,Y. and Nakamura,H.
  TITLE     Cloning and sequencing of the genes involved in the conversion of
            5-substituted hydantoins to the corresponding L-amino acids from
            the native plasmid of Pseudomonas sp. strain NS671
  JOURNAL   J Bacteriol 174 (3), 962-969 (1992)
   PUBMED   1732229
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10000641
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Paraburkholderia domus"
                     /db_xref="taxon:2793075"
     Protein         1..562
                     /product="hydantoinase B/oxoprolinase family protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=60873
     Region          17..556
                     /region_name="HyuB"
                     /note="N-methylhydantoinase B/oxoprolinase/acetone
                     carboxylase, alpha subunit [Amino acid transport and
                     metabolism, Secondary metabolites biosynthesis, transport
                     and catabolism]; COG0146"
                     /db_xref="CDD:439916"
ORIGIN      
        1 mnisesmsgr tpvdvqpakl dpitvavigs alstiaeemg kaliraayst nikerqdcst
       61 alfdtgghii aqaehipihl gsllgiagyv lehhdmttir pgdvfignda ytgggthlnd
      121 ivliepvffk gelvgwvanl ahhsdfvdrg hahifqeglr ippvrlykqg vlqddvmdli
      181 llncqvpher tsdfraqmaa nrlgvqrfqd lcerygrdvv dqaaaeildy terrtragia
      241 liadgvyefq hefdtnlidd ildlkvrvsv qgeelfvdfp dappqvrapi nmvftalqat
      301 vffavralvd pdipanagfh rpihisapag svlnstppaa vysrtdiamr lvdmifaala
      361 pvlpervvaa stggilltts gmhprtgrfy vynemqgggm gararkdgld gvqvnttnsa
      421 nlpiealete hpvmvecyel vrdsggpgey rggmtmrrrv rildheamis aggtnsrlsp
      481 ygifgghags parvempega pplerrksvl qagqsvgmva aggggygdpr hrprelvlrd
      541 lkedriseaa ardiygldps ll
//
LOCUS       WP_236071561             171 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Paraburkholderia domus].
ACCESSION   WP_236071561
VERSION     WP_236071561.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia domus
  ORGANISM  Paraburkholderia domus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 171)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 171)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Paraburkholderia domus"
                     /db_xref="taxon:2793075"
     Protein         1..171
                     /product="VOC family protein"
                     /calculated_mol_wt=19017
     Region          <2..23
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
     Region          54..170
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 maegfwfedp dgnllqlrpg iktspdfkpa trngpalprl rgasfraetp tarplrlshv
       61 lmytpdiraa iafyeqalgm elsdgsegiv aflhrrhgsd hhliafaqga akrwhhsvwd
      121 vpsvdevgvg tmqmrhagyv qgwgvgrhvl gsnyfqyvrd pwgsyweysa g
//
LOCUS       WP_236071574             270 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA thioesterase domain-containing protein [Streptomyces
            polyasparticus].
ACCESSION   WP_236071574
VERSION     WP_236071574.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces polyasparticus
  ORGANISM  Streptomyces polyasparticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 270)
  AUTHORS   Dillon,S.C. and Bateman,A.
  TITLE     The Hotdog fold: wrapping up a superfamily of thioesterases and
            dehydratases
  JOURNAL   BMC Bioinformatics 5, 109 (2004)
   PUBMED   15307895
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025008.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13622.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Streptomyces polyasparticus"
                     /db_xref="taxon:2767826"
     Protein         1..270
                     /product="acyl-CoA thioesterase domain-containing protein"
                     /calculated_mol_wt=28595
     Region          44..264
                     /region_name="4HBT_3"
                     /note="Thioesterase-like superfamily; pfam13622"
                     /db_xref="CDD:463937"
ORIGIN      
        1 mttalpdspg rllargldgp veagphlwgf gglhgglala lltsamhrsv paeaelrtvt
       61 arfhrsltdr fdvestvlrp gtvttlaara vradggpgpe adatatfapr rpagtvpmsp
      121 appaapppqd celftippef vpistfmeir pvgpnrpysg caqpeltawi rfteddlppd
      181 tgrfltlida lapsyaavlt dlrlvptlel tvrpapglaq asspwillha rthradaggw
      241 vdehidawde sgthlgsgyq lrlvrppsan
//
LOCUS       WP_236071590             361 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Streptomyces
            polyasparticus].
ACCESSION   WP_236071590
VERSION     WP_236071590.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces polyasparticus
  ORGANISM  Streptomyces polyasparticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 361)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 361)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 361)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 361)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Streptomyces polyasparticus"
                     /db_xref="taxon:2767826"
     Protein         1..361
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=38251
     Region          33..329
                     /region_name="drrA"
                     /note="daunorubicin resistance ABC transporter ATP-binding
                     subunit; TIGR01188"
                     /db_xref="CDD:130256"
ORIGIN      
        1 mtireqreqa elrdqrapre qaaaaietag lcksygshev lrgldltvpr gtvyallgpn
       61 gagkttavri latlatadag tarvagfdvr terarvrrsi sltgqfaavd emqtgaenlr
      121 mmarlapsat ggrpsraear akaagllarf gltdaadrlv ktysggmrrr ldlatslvgs
      181 peiifldept tgldprsrqe lwavvrelra egttvflttq yleeadqlad riavldagsl
      241 vaegtaaelk qrvsdhrldi tladsaaylr lspratysdp asltlgiptd gsaaevrall
      301 deldpartai taftlhsatl ddvfltltgr ppapdpaart ppaiapttep apatpkdpsh
      361 v
//
LOCUS       WP_236071652             510 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA cytosine methyltransferase [Streptomyces polyasparticus].
ACCESSION   WP_236071652
VERSION     WP_236071652.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces polyasparticus
  ORGANISM  Streptomyces polyasparticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012372.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00145.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Streptomyces polyasparticus"
                     /db_xref="taxon:2767826"
     Protein         1..510
                     /product="DNA cytosine methyltransferase"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=55991
     Region          8..>206
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
     Region          <460..506
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
ORIGIN      
        1 mmrrpatsrp tsihlfcgag gdsdgfrrag fdvvlganhw dravethaan fpeaehlcvd
       61 ldhydmrrlp karvlvgspi ctegspadgv srpkpaptag qldlfeegpi adaawertra
      121 taydilraae vhhfdavvce nvprfatawp lfswwlhgme ilgfrhqivs vtaahigddd
      181 gnehapqwrd rifivftrre mrapnldvrp pawcpscetd vlavqswrin rktkrphtig
      241 kyrqqydfrc pnqacrhqvi epyvrpaata inwtnpgiri gdrdtlgmrp laaatlrkir
      301 lglakhqvpt mvtvnhsdqh dgraypahas plptrtvrig dglavppmlv pvggswntdp
      361 amvtvpmrtr mtreseallv pgafitehrg ggsttraiad plasitaggn hhglvipyrk
      421 ggpsttgvpl htiatresag vvlgadadpa eialedcyfr mlsprehlra qrftddytvl
      481 ghggeqtkqa gnavpanvaq wiasrllevl
//
LOCUS       WP_236071679             421 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3142 domain-containing protein [Paraburkholderia domus].
ACCESSION   WP_236071679
VERSION     WP_236071679.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia domus
  ORGANISM  Paraburkholderia domus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022784.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11340.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Paraburkholderia domus"
                     /db_xref="taxon:2793075"
     Protein         1..421
                     /product="DUF3142 domain-containing protein"
                     /calculated_mol_wt=45443
     Region          100..324
                     /region_name="DUF3142"
                     /note="Protein of unknown function (DUF3142); pfam11340"
                     /db_xref="CDD:431826"
ORIGIN      
        1 mndggsapar rqvrgalaac avpllvfvlm lvgacgkpst plsndayiwq rkwtppvtsa
       61 feysrgfvqt whvlaaekdt kndwtivspd wttltaahap vtaviridgq lddlnalpva
      121 rivelaadwk qhgitlaaie idhdcatsrl aaytrflaal raqldptvkl titalpawld
      181 staldallaq adesvlqvha vmnpaqglfd ptqarawlga faqrtkhpwr valptygsrv
      241 twgddgrvag ieserpmlla ngvtqgvshe lvaqpeqisa fvtqierhal pglkgivwfr
      301 lptdaderaw slatwravlt rapltvaiaa dvrksaqqpg lfdvslvsgg tidaplpavv
      361 rtdssceaad gvngyaldyd argmllrrvq pgllhagmrr digwlrcgaa dykkvsvhve
      421 p
//
LOCUS       WP_236071987             628 aa            linear   BCT 02-MAR-2025
DEFINITION  Mu transposase C-terminal domain-containing protein [Streptomyces
            polyasparticus].
ACCESSION   WP_236071987
VERSION     WP_236071987.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces polyasparticus
  ORGANISM  Streptomyces polyasparticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 628)
  AUTHORS   Rice,P. and Mizuuchi,K.
  TITLE     Structure of the bacteriophage Mu transposase core: a common
            structural motif for DNA transposition and retroviral integration
  JOURNAL   Cell 82 (2), 209-220 (1995)
   PUBMED   7628012
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020859.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09299.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Streptomyces polyasparticus"
                     /db_xref="taxon:2767826"
     Protein         1..628
                     /product="Mu transposase C-terminal domain-containing
                     protein"
                     /calculated_mol_wt=69908
     Region          55..429
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
     Region          445..507
                     /region_name="Mu-transpos_C"
                     /note="Mu transposase, C-terminal; pfam09299"
                     /db_xref="CDD:430512"
ORIGIN      
        1 meegrrvppt arieefpkka adqarwwesh ilevlhglpp daplgavprp efdprrhsla
       61 ererakaael kaaghrvtas gikqrrhryr rdglvgladg rsakqlppfg riapavvdam
      121 rqavdetada ssktvgfiiw rtkqimasrd dgdgielptd rtlyrlfdkl avgthatgsa
      181 ttrrslhtrp agpfgevpav apgelmqids spldvlvrld dgiaekvelt alvdiasrsi
      241 taavlrpttk aadasalvar sitpemmrpg wseslrmsrs vlphrrllal derlehaaar
      301 pvivpetvvc dhgkvfishn fqsscrflgi tlqpthkasp fekgviektl gsvatlfaqf
      361 vtgytgrsve rrgrrledgp lwslpelqel ldewivavwq nrphdslrdp aapkrafspn
      421 ekyamllesc gyiaaplsge dyvellperw qainaygiki nhrtydspel nplrrqrsgi
      481 aeknglweih hdpydvsriw vrdrrggser witvfwrhlh rvgvpfgema waharqqapr
      541 nvgeaqiadv aadllrrahd gplseqvapa krsqkdrria artratapnr aipdppadse
      601 ptdeeteasd kvvplglfdp lanpwrrt
//
LOCUS       WP_236072136             430 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)/FAD-dependent oxidoreductase [Streptomyces polyasparticus].
ACCESSION   WP_236072136
VERSION     WP_236072136.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces polyasparticus
  ORGANISM  Streptomyces polyasparticus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11458465
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Streptomyces polyasparticus"
                     /db_xref="taxon:2767826"
     Protein         1..430
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /EC_number="1.-.-.-"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=46880
     Region          12..430
                     /region_name="Ppro0129"
                     /note="Predicted flavin-containing amine oxidase [General
                     function prediction only]; COG2907"
                     /db_xref="CDD:442151"
ORIGIN      
        1 mqrqrdsmaa ggrrrtavvg ggiagltaay ilgaahdvtl yeaddrlggh ahthdvvapd
       61 grvrqvdsgf ivhnrrtypy llrlfaelgv atqetemsms vrcegcgley agargvrgli
      121 arprnalrpa ylrmltevpr fhtaarella drtrsetplg eflagqrfsa yfvqhfmtpv
      181 vsavwscppy talryparyl frfldhhgml svtgsptwrt vtggsqayva rigkqlpavr
      241 tstpiravrr gpagaevtte dgtvtpydsv viathpdqal riladptdae trilgafrys
      301 rnptllhtdt svlprssgar aawnylmpdc gagadrvrvs ydmnrlqrld apqtyvvtlg
      361 degqvpadrv larmvyehpq ytpesvaaqr rlpslsgpvt afagayhgwg fhedgcrsgv
      421 eaaaalgvtw
//
LOCUS       WP_236072326             119 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Streptomyces cinereoruber].
ACCESSION   WP_236072326
VERSION     WP_236072326.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces cinereoruber
  ORGANISM  Streptomyces cinereoruber
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024736.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13340.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Streptomyces cinereoruber"
                     /db_xref="taxon:67260"
     Protein         1..119
                     /product="transposase"
                     /calculated_mol_wt=12788
     Region          8..>116
                     /region_name="transpos_IS5_3"
                     /note="IS5 family transposase; NF033580"
                     /db_xref="CDD:468097"
ORIGIN      
        1 msgdlsqwlv pddlwamvep vpppfrsrpq gggtapidqr avftavvyvl tsgcawrylp
       61 psfgvspata hrrfsvwtas gvrrrlhrvv ldetgarggl dwssviagaa sarakkesr
//
LOCUS       WP_236072331             379 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein, partial [Streptomyces
            cinereoruber].
ACCESSION   WP_236072331
VERSION     WP_236072331.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces cinereoruber
  ORGANISM  Streptomyces cinereoruber
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 379)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 379)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 379)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Streptomyces cinereoruber"
                     /db_xref="taxon:67260"
     Protein         <1..>379
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
     Region          8..378
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(93,123,125,156,158,362..364,366,368)
                     /site_type="active"
                     /db_xref="CDD:173847"
ORIGIN      
        1 fdlyrpseeh dmlresvral aeakiapfaa evdeegrfpq ealdalvand lhavhvpesy
       61 ggagadalat vivieevarv cgssslipav nklgslpvvl sgseelkakf lgplakgdam
      121 fsyalsepda gsdaagmktr avrdgdfwil ngvkrwitna gvsqyytvma vtdpdkrskg
      181 isafvvdkdd egvsfgapek klgikgsptr evyldnvrip asrmigaegt gfatamktld
      241 htritiaaqa igiaqgaldy akgyvkerkq fgkpiadfqg vqfmladmam kleaarqlty
      301 aaaakservd gdltffgaaa kcfasdvame vttdavqllg gygytrdypv ermmrdakit
      361 qiyegtnqvq rivmarnlp
//
LOCUS       WP_236072441             439 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Paraburkholderia domus].
ACCESSION   WP_236072441
VERSION     WP_236072441.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia domus
  ORGANISM  Paraburkholderia domus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Paraburkholderia domus"
                     /db_xref="taxon:2793075"
     Protein         1..439
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45648
     Region          59..410
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(74,125..126,128..130,133,153,156..157,160,241,
                     244..245,248..250,253,282,286,336..337,341,345,362,
                     365..366,369..370,373)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340883"
ORIGIN      
        1 mnatakeavr ddeterspsp rslrgldgln flmadvrdgl gpflsvflks nqhwqsgsig
       61 ivmaasgiaa amsqipagll vdsmpakrfl ialsgllvat gclliaffpa lptvlaaqit
      121 lgaasaiipp claalslgiv ghrllparis rnegfnhagn ftaavlagtl gqyvgiiwlf
      181 ylvcgfavas slvvllikpr didhelargg esalpsdgqh rpvplaalwk rrdlviflia
      241 vvlfhfgnaa mlplagqmia rvhpgmdvia lgaciiaaql vmvvvaslvg rtmragvgrk
      301 kiflvalail pirgvlfslt tspyavvgiq lldgvaagif gvvavviasd lmrgsgrfnl
      361 aqglmalavg vgaalsnvtg gfvvqnfgfp agflvlsvva vaaliffaif mpetrpdegr
      421 gnadrsigqr gptplpfqr
//
LOCUS       WP_236072424             279 aa            linear   BCT 02-MAR-2025
DEFINITION  autoinducer binding domain-containing protein [Paraburkholderia
            domus].
ACCESSION   WP_236072424
VERSION     WP_236072424.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia domus
  ORGANISM  Paraburkholderia domus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03472.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Paraburkholderia domus"
                     /db_xref="taxon:2793075"
     Protein         1..279
                     /product="autoinducer binding domain-containing protein"
                     /calculated_mol_wt=31169
     Region          56..185
                     /region_name="Autoind_bind"
                     /note="Autoinducer binding domain; pfam03472"
                     /db_xref="CDD:427319"
     Region          <99..277
                     /region_name="PRK10188"
                     /note="transcriptional regulator SdiA"
                     /db_xref="CDD:182292"
ORIGIN      
        1 mrhlafqtlw dragvanmkh vsrrrsnegq hglsprsdrl qtsapapvmr lacatdissl
       61 vesfghaark lgfphyvisr vtrsrstctr rtalemigsh ypqewvrhyq rrdyassdpv
      121 hraaflqsap yrwhdiigls kaerrlldea geaglragls ipvhqsdgsi llfnlsgplr
      181 svndainsrl aylisaqfhf elhrlaqmsp kraahlltpr qlecltwvar gktsaeigei
      241 lgrsrytvdy hieeamealn irgrtaaavh asvqgiikp
//
LOCUS       WP_236072504             319 aa            linear   BCT 02-MAR-2025
DEFINITION  SGNH/GDSL hydrolase family protein [Paraburkholderia domus].
ACCESSION   WP_236072504
VERSION     WP_236072504.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia domus
  ORGANISM  Paraburkholderia domus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 319)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 319)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00657.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Paraburkholderia domus"
                     /db_xref="taxon:2793075"
     Protein         1..319
                     /product="SGNH/GDSL hydrolase family protein"
                     /GO_function="GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /calculated_mol_wt=33534
     Region          2..309
                     /region_name="COG3240"
                     /note="Phospholipase/lecithinase/hemolysin [Lipid
                     transport and metabolism, General function prediction
                     only]"
                     /db_xref="CDD:442472"
ORIGIN      
        1 mqvvsfgdsl sdvgtyayar qfgggayttn pgaisvqlia ehygsgltpa ltggfgqpsv
       61 vhpegfgyaq ggarvagppn pgdatgdtge lqtpltlqva aylqsharft gqqlvlmqgg
      121 andvqdayga wagmvanggd pgaslqavlp slrqaaqqfa glvhnvqqhg athivvqnvp
      181 diskvpianl leqqlpgstk vlrrmaqvfn talddalpss pavlridaft fidevsenyr
      241 qlgfrfdgsi gtnvacapan lppafqaddt salfcsrsty vspnadtiym fadayhptth
      301 lqkliadyvv vkidtwlhk
//
LOCUS       WP_236072524             421 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3142 domain-containing protein [Paraburkholderia domus].
ACCESSION   WP_236072524
VERSION     WP_236072524.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia domus
  ORGANISM  Paraburkholderia domus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022784.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11340.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Paraburkholderia domus"
                     /db_xref="taxon:2793075"
     Protein         1..421
                     /product="DUF3142 domain-containing protein"
                     /calculated_mol_wt=45444
     Region          100..324
                     /region_name="DUF3142"
                     /note="Protein of unknown function (DUF3142); pfam11340"
                     /db_xref="CDD:431826"
ORIGIN      
        1 mndggsapar rqvrgalaac avpllvfvlm lvgacgkpst plsndayiwq rkwtppvtsa
       61 feysrgfvqt whvlaaekdt kndwtivspd wttltaahap vtaviridgq lddlnalpva
      121 rivelaadwk qhgitlaaie idhdcatsrl aaytrflaal raqldptvkl titalpawld
      181 staldallaq adesvlqvha vmnpaqglfd ptqarawlga faqrtkhpwr valptygsrv
      241 twgddgrvag ieserpmlla ngvtqdvshe lvaqpeqisa fvtqierhal pglkgivwfr
      301 lptdaderaw slstwravlt rapltaaiaa dvrksaqqsg lfdvslvsgg tidaplpavv
      361 rtdssceaad gingyaldyd argmllrrvq pgllhagmrr digwlrcgaa dnkkvsvhve
      421 p
//
LOCUS       WP_236072560             316 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Paraburkholderia domus].
ACCESSION   WP_236072560
VERSION     WP_236072560.1
KEYWORDS    RefSeq.
SOURCE      Paraburkholderia domus
  ORGANISM  Paraburkholderia domus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (residues 1 to 316)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 316)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Paraburkholderia domus"
                     /db_xref="taxon:2793075"
     Protein         1..316
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=36356
     Region          111..308
                     /region_name="INT_RitB_C_like"
                     /note="C-terminal catalytic domain of recombinase RitB, a
                     component of the recombinase trio; cd00797"
                     /db_xref="CDD:271178"
     Site            order(150,250,253..254,293)
                     /site_type="active"
                     /db_xref="CDD:271178"
ORIGIN      
        1 maeqptmstl rksmeeylam rrrlgfklhe agqrledfvc ymerrrashi saslaltwaq
       61 kspsvqpviw aqrlgvvrgf arylsafdph teipraells hryhrrapyl ytdeetekil
      121 aaalalppes glrrwtyftl igllsvtglr pgeavnlele dvdlkecvlt vrgskfgksr
      181 wvpihsstrd aladylqrre rclvgrpeah vfitsqgkpl ngdmvshtft altreiglrd
      241 sstrraprli dyrhlfavtt lmrldrsgkd pvrwlpvlst flghqgasdt ywyveqhpel
      301 mkqamkrleh rwkdvs
//
LOCUS       WP_236072719             311 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF481 domain-containing protein [Prochlorococcus marinus].
ACCESSION   WP_236072719
VERSION     WP_236072719.1
KEYWORDS    RefSeq.
SOURCE      Prochlorococcus marinus
  ORGANISM  Prochlorococcus marinus
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Synechococcales; Prochlorococcaceae; Prochlorococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016241.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04338.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Prochlorococcus marinus"
                     /db_xref="taxon:1219"
     Protein         1..311
                     /product="DUF481 domain-containing protein"
                     /calculated_mol_wt=33525
     Region          69..>198
                     /region_name="DUF3078"
                     /note="Protein of unknown function (DUF3078); cl46804"
                     /db_xref="CDD:481144"
ORIGIN      
        1 mlakrvyafv aigamiapqy araenltlkl ingdvvsgey lpeessnkvk vllspyfgri
       61 eidaslikpe pipsrwlssv dvgidgsntg ddlsfgyais astrfkgtdh elnasasfdf
      121 dksvdaesvs tidtnqgafs irydrilssp kwsayastdy tynalndvgv ntnifsvgvg
      181 ykvldhkkls lrvslgpsli wfdggsgcst gdyvsdgial gkycgeiips gtigaaiewd
      241 vnekfrlsik dqltgsfvng maagndlsgt lkffpskdsk fymslvarli ysalqspdis
      301 ntfnfklgte f
//
LOCUS       WP_236072757             292 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6160 family protein [Marinobacter nauticus].
ACCESSION   WP_236072757
VERSION     WP_236072757.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter nauticus
  ORGANISM  Marinobacter nauticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039674.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19657.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Marinobacter nauticus"
                     /db_xref="taxon:2743"
     Protein         1..292
                     /product="DUF6160 family protein"
                     /calculated_mol_wt=30709
ORIGIN      
        1 mttqaygcaa lamlclgisp vsqaelepis dnamgevtgq afmqienipg qnheftrmtl
       61 tmdvetrvni ddiqagqing gtdfsathla lghiarndge tfngktynag deipfearmp
      121 yielaedaag lagfrmgfgq argsvsshtt sfsgdiglkv qdatgavydt ylfdgdggaa
      181 tnyrashigi dpnscvsgan ctplthlqsl tvgedngsad gtigftdaff vgfqrddgva
      241 wqtldganti svgkgvfinl ptnmtvdlsq lvgpdgidrl rthqtdmgtk lf
//
LOCUS       WP_236072819             960 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Marinobacter nauticus].
ACCESSION   WP_236072819
VERSION     WP_236072819.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter nauticus
  ORGANISM  Marinobacter nauticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024572.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13174.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Marinobacter nauticus"
                     /db_xref="taxon:2743"
     Protein         1..960
                     /product="tetratricopeptide repeat protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=108496
     Region          96..>293
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          123..204
                     /region_name="CpoB"
                     /note="Cell division protein CpoB, coordinates
                     peptidoglycan biosynthesis and outer membrane constriction
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG1729"
                     /db_xref="CDD:441335"
     Region          310..481
                     /region_name="tol_pal_ybgF"
                     /note="tol-pal system protein YbgF; TIGR02795"
                     /db_xref="CDD:188247"
     Region          418..592
                     /region_name="BamD"
                     /note="Outer membrane protein assembly factor BamD,
                     BamD/ComL family [Cell wall/membrane/envelope biogenesis];
                     COG4105"
                     /db_xref="CDD:443281"
     Region          612..852
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
ORIGIN      
        1 msngipgkmv kglvvagall masgcqmlqs mipagdeemp rvregtlaal patetrqvqg
       61 vetgsgpsdd vsieivmesy kallplvddp rkqvtirhrl adlefqraer kkadtavdel
      121 sgaieayqrl lseyperdgn dkiyyqlara welrgatpqq ldtldtlvrr ypdsdywiea
      181 qfrrgdllfi dgryreaeqa fdevtlasqe rmadasflvn ahymkgwslf kqaqyqealf
      241 syvevldlvm pegqpvedvd rrsqtliedl frvvglslsy ldgaetlqal frqtggrpye
      301 ilvydrysgl lvereqygda idvfeafied hpaspwapry hmriidtlel agftrtvper
      361 kadfvsrygi ysdywqsagp eaigfigqql eqllpeladr qyllageasd qqqsddhyrk
      421 aasyyaefaa tfpdhprtpe rlfllgetyl eledwaeaia afervaydyp qdtvsgraae
      481 agyasvlafr eysitwnsls vseqaayqel qqlnrlrfan afpedprapa vyyialqref
      541 drknweetvn maarlvtwqp tpsaelttea llfsghslse laryaeaeqa yrdalatmae
      601 dderrsgvre nlaaavyrqa eqladagnve aavseflrvg avvpesalra naeydaasll
      661 ttaklwepai gvltsfrraf pdhelidtvp aklalayret aqweraadel qqmvalattp
      721 eerrenllia aelydqagnr dkaidtwrny anshpepadv ymeaanrlae lyqqaddtvk
      781 rdywlrkqme tvdrnpdaad drmrylaasa sailareala rydsirltlp lnesmaaktd
      841 aleravnayk ktasyglstf ateagyqiah iygrlgadlm dserptglse lelaqyelll
      901 eeqaypfedn aidiheqnir raregifdew vkrsyealgv llpgryrkee vtsgvvyeld
//
LOCUS       WP_236072834             924 aa            linear   BCT 02-MAR-2025
DEFINITION  outer membrane protein assembly factor BamD [Marinobacter
            nauticus].
ACCESSION   WP_236072834
VERSION     WP_236072834.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter nauticus
  ORGANISM  Marinobacter nauticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (residues 1 to 924)
  AUTHORS   Malinverni,J.C., Werner,J., Kim,S., Sklar,J.G., Kahne,D., Misra,R.
            and Silhavy,T.J.
  TITLE     YfiO stabilizes the YaeT complex and is essential for outer
            membrane protein assembly in Escherichia coli
  JOURNAL   Mol Microbiol 61 (1), 151-164 (2006)
   PUBMED   16824102
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024915.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13525.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..924
                     /organism="Marinobacter nauticus"
                     /db_xref="taxon:2743"
     gene            1..924
                     /gene="bamD"
     Protein         1..924
                     /product="outer membrane protein assembly factor BamD"
                     /calculated_mol_wt=103711
     Region          <96..297
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Site            order(118,121..122,125..126,128,155,158..159,162..163,
                     165..166,192,195..196,199..200,203)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          118..145
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          125..222
                     /region_name="CpoB"
                     /note="Cell division protein CpoB, coordinates
                     peptidoglycan biosynthesis and outer membrane constriction
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG1729"
                     /db_xref="CDD:441335"
     Region          150..183
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <165..539
                     /region_name="COG3903"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443109"
     Region          578..>653
                     /region_name="BamD"
                     /note="Outer membrane protein assembly factor BamD,
                     BamD/ComL family [Cell wall/membrane/envelope biogenesis];
                     COG4105"
                     /db_xref="CDD:443281"
ORIGIN      
        1 mamtlahapv faqesfrvel grdgetlgdm rpvflkfesr plpaisplev arryqklfes
       61 sdepevrida lnrlnnirdr sgedvgfsee reaaiyeevl esyesilakg sfsgrldell
      121 yqmakahalt gqpeqsiarl kqlvglypns glvpearfri aeaafsagry aeaeagyrql
      181 lehdshqela akarymlgws qfkqgnpawa rasasfmavl dqqlpdhsal anppaqsmdm
      241 ledtfrvlal masrqsdart ladwldgres sawqhllydr ladlhaverr yeravsvnna
      301 fvsefaghta spdflaqsvs ywqlagntpq alaarddyvq rlgaearfqt mtpeqkglwa
      361 qysrfladhy yatgtdlssr nqtaaaseaw akaahyyerl aprseqagel lhlagdarll
      421 agdrteavrn fraaaydhrh gdsrdsawaa irivredlel asgesrtaal lvlsneeqry
      481 aeafgpderl sglradlanr wydlgefera lqyasstltw eragvterya awlvtarirq
      541 knnefglaer awrqalplad easpdaesqr rslleqlasa iyqqgekaar agdatlavah
      601 fqrvegvmpg seiaikaryd aantllrasd wlaainelqr frmdypshel tpetseklvh
      661 ayqesgqglk aaeellnrse tlvdpwptrl raaaifhaeg dsasrnqlyk nwlavaptpd
      721 sadehvqqqt mrqrliesgd sviavreqll arerashwhs edtlkwaada alffgaqtae
      781 rfagialvhp lepslarkqa amqqaqeylq eaasfagdgv rsevlyrrae lyrtlasdlm
      841 ssevpaelne meamqyqmll eeeafpleee amalharnhe riptegfdew iqrslealat
      901 mhpgrydrql rwmswttdtn qggs
//
LOCUS       WP_236072680             111 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GRAM domain-containing protein [Prochlorococcus].
ACCESSION   WP_236072680
VERSION     WP_236072680.1
KEYWORDS    RefSeq.
SOURCE      Prochlorococcus
  ORGANISM  Prochlorococcus
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Synechococcales; Prochlorococcaceae.
REFERENCE   1  (residues 1 to 111)
  AUTHORS   Doerks,T., Strauss,M., Brendel,M. and Bork,P.
  TITLE     GRAM, a novel domain in glucosyltransferases, myotubularins and
            other putative membrane-associated proteins
  JOURNAL   Trends Biochem Sci 25 (10), 483-485 (2000)
   PUBMED   11050430
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014892.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02893.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Prochlorococcus"
                     /db_xref="taxon:1218"
     Protein         1..111
                     /product="GRAM domain-containing protein"
                     /calculated_mol_wt=12452
     Region          8..95
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
ORIGIN      
        1 mktvlevgek lvkkspanhq rgietvggml ylttarlife shalniqagv ttvsiseinr
       61 lrkdwtkfln vipifpntla vtsrsghedk fillrrtpwi neinklkegq n
//
LOCUS       WP_236073005             174 aa            linear   BCT 02-MAR-2025
DEFINITION  TadE/TadG family type IV pilus assembly protein [Streptomyces
            tardus].
ACCESSION   WP_236073005
VERSION     WP_236073005.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces tardus
  ORGANISM  Streptomyces tardus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 174)
  AUTHORS   Kachlany,S.C., Planet,P.J., DeSalle,R., Fine,D.H. and Figurski,D.H.
  TITLE     Genes for tight adherence of Actinobacillus actinomycetemcomitans:
            from plaque to plague to pond scum
  JOURNAL   Trends Microbiol 9 (9), 429-437 (2001)
   PUBMED   11553455
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019428.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07811.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Streptomyces tardus"
                     /db_xref="taxon:2780544"
     Protein         1..174
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /calculated_mol_wt=17855
ORIGIN      
        1 mdpgegdeqq qrqeadeldg rlppvaaptt rtgrgagtgr rartrpaart rpsartrrrg
       61 gdrgqaaief igflplllli alagvqlglv aytavqsgta araaartasq dagespaaag
      121 reaisswlad gaafaqdtpd gevtvtatlr ipsvipgvdl gsvqrsstmp radd
//
LOCUS       WP_236073138             559 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein
            [Streptomyces tardus].
ACCESSION   WP_236073138
VERSION     WP_236073138.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces tardus
  ORGANISM  Streptomyces tardus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 559)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Streptomyces tardus"
                     /db_xref="taxon:2780544"
     Protein         1..559
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /calculated_mol_wt=57301
     Region          67..173
                     /region_name="MecA_N"
                     /note="NTF2-like N-terminal transpeptidase domain;
                     pfam05223"
                     /db_xref="CDD:428377"
     Region          <220..558
                     /region_name="FtsI"
                     /note="Cell division protein FtsI, peptidoglycan
                     transpeptidase (Penicillin-binding protein 2) [Cell cycle
                     control, cell division, chromosome partitioning, Cell
                     wall/membrane/envelope biogenesis]; COG0768"
                     /db_xref="CDD:440531"
ORIGIN      
        1 mregqrmavi gavaaavvga agfgayalvg ggddessdqs qrsgsdsges ksesvetgpp
       61 sseevratak kfltaweagd iadaaaltdd kaaatkalts fakdgkvgtv ttsgssasgg
      121 tvaysvvaei shgelattld yrtklkverd tssgqvvidw qptvlhpelk kgqslvtdaa
      181 gdppitavdr ngkeltkqah pelgdilddl rkrygdrtdg tagvetrivt qpkkgekvee
      241 sekakdaktl kvlskgtpgq lkttldadlq kaamkaldgr akgsavaikp stgellaian
      301 tpatgfnsai rgslapgstw kvvsagmlld kglaesaakh pcpkyftygg wkfqnldkfd
      361 ikdgtfadsf aascntafis rapklengdl gsyarntfgl gldwqvgtgt fdgavptqsd
      421 aqmaasligq gavrmnpmtm asvaatvkdg sfkqpiivsp sldnrqvaka pnglsagtag
      481 elralmkrta tngtaaeama svggdkgakt gsaevdgqkk pnawftaykd dlavaavipn
      541 sghggknagp vvatilnag
//
LOCUS       WP_236073134             172 aa            linear   BCT 02-MAR-2025
DEFINITION  RcpC/CpaB family pilus assembly protein [Streptomyces tardus].
ACCESSION   WP_236073134
VERSION     WP_236073134.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces tardus
  ORGANISM  Streptomyces tardus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Tomich,M., Planet,P.J. and Figurski,D.H.
  TITLE     The tad locus: postcards from the widespread colonization island
  JOURNAL   Nat Rev Microbiol 5 (5), 363-375 (2007)
   PUBMED   17435791
REFERENCE   2  (residues 1 to 172)
  AUTHORS   Iyer,L.M. and Aravind,L.
  TITLE     The emergence of catalytic and structural diversity within the
            beta-clip fold
  JOURNAL   Proteins 55 (4), 977-991 (2004)
   PUBMED   15146494
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028286.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16976.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Streptomyces tardus"
                     /db_xref="taxon:2780544"
     Protein         1..172
                     /product="RcpC/CpaB family pilus assembly protein"
                     /calculated_mol_wt=16989
     Region          70..171
                     /region_name="RcpC"
                     /note="Flp pilus assembly protein RcpC/CpaB; pfam16976"
                     /db_xref="CDD:435686"
ORIGIN      
        1 mgalialall ipswaqeaea pgsptsagqe aappetarsa gdgprsdsps sadedrngas
       61 agggrregpa pgrlvsapvr ladaevvgll rrgdrvdvla sraeesagsr arlvahrarv
      121 aqlptpardg gasgasgtra edgglvvlav ppatartlag aaahsrltvs lw
//
LOCUS       WP_236073159              62 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5999 family protein [Streptomyces tardus].
ACCESSION   WP_236073159
VERSION     WP_236073159.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces tardus
  ORGANISM  Streptomyces tardus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 62)
  AUTHORS   Yanai,K., Murakami,T. and Bibb,M.
  TITLE     Amplification of the entire kanamycin biosynthetic gene cluster
            during empirical strain improvement of Streptomyces kanamyceticus
  JOURNAL   Proc Natl Acad Sci U S A 103 (25), 9661-9666 (2006)
   PUBMED   16766657
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2006 Aug 22;103(34):12951]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039316.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19462.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..62
                     /organism="Streptomyces tardus"
                     /db_xref="taxon:2780544"
     Protein         1..62
                     /product="DUF5999 family protein"
                     /calculated_mol_wt=6425
     Region          2..58
                     /region_name="DUF5999"
                     /note="Family of unknown function (DUF5999); pfam19462"
                     /db_xref="CDD:466098"
ORIGIN      
        1 mcqhtppcps atapdrdaah llahvpeqgw sllcnevlhf edtggllpsg aviaprrpsl
       61 ss
//
LOCUS       WP_236073229             642 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Streptomyces tardus].
ACCESSION   WP_236073229
VERSION     WP_236073229.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces tardus
  ORGANISM  Streptomyces tardus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Streptomyces tardus"
                     /db_xref="taxon:2780544"
     Protein         <1..>642
                     /product="DUF6531 domain-containing protein"
     Region          <31..487
                     /region_name="RhsA"
                     /note="Uncharacterized conserved protein RhaS, contains 28
                     RHS repeats [General function prediction only]; COG3209"
                     /db_xref="CDD:442442"
     Region          166..232
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
     Region          <354..>642
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
ORIGIN      
        1 pgstqpasas gaaspsgpas psgdaspsrp aapsgsapps easasatasg gdraapnqsd
       61 satpagsars eaapspsgpt padagtgntp gndgpatads gdshgsddgs etadtdsada
      121 adapaldgpe gdapppppvn pepladatad pqeasqhera tecptdpvna atgqmlmeet
      181 dlslpgilpl virrkhktgy rygqfygpsw sstfderlel dahggaqwsr hdsavfcypt
      241 lpttpddtvt plegdpsrlt atgpdedgat tylvteprsg itrhfhtgga gdrrlwlahl
      301 sdrnhntitf hrtpdgtpta vthtggyhvd vattagrvtg lvvrdtgtdd atpvtsytyd
      361 dagnlagian ssgrplryty dehrrvtswt drnedtyryl ydhegrvhet vgpdgalssr
      421 feydtesrvt lytdacgatt tyqhnelhqv vaetdplgnt trstwsrddl llsrtdplgq
      481 tttldydehr nlvavrhrdg tvsrtahnhl hlpttrtnpd gstvtfghde sgntvsvtgp
      541 dgattrltrd sagavtsvvd paggtryavn daaglpvrlt delgastlvt rdafgrpvet
      601 tdplgsttrf gwtpegglls rsndegstqs wtydgegnrl th
//
LOCUS       WP_257954469             158 aa            linear   BCT 02-MAR-2025
DEFINITION  TetR family transcriptional regulator [Nocardioides sp. B-3].
ACCESSION   WP_257954469
VERSION     WP_257954469.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012655.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00440.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..158
                     /product="TetR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=17308
     Region          1..>83
                     /region_name="YbjK"
                     /note="DNA-binding transcriptional regulator YbjK
                     [Transcription]; COG3226"
                     /db_xref="CDD:442459"
     Region          48..156
                     /region_name="TetR_C_20"
                     /note="Tetracyclin repressor-like, C-terminal domain;
                     pfam17925"
                     /db_xref="CDD:465570"
ORIGIN      
        1 mravaeqaev algtlyryfp skihllvtal areferaekv latkaisgdt padrvitvlr
       61 rttrglqgdp hltdaltraf mfadksaaqe ihavgmlltr mltramhpds ddisdddiai
      121 arvigdvwls alvawvtgrs taeetaahme ravrlilr
//
LOCUS       WP_257954478             282 aa            linear   BCT 02-MAR-2025
DEFINITION  MCE family protein [Nocardioides sp. B-3].
ACCESSION   WP_257954478
VERSION     WP_257954478.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 282)
  AUTHORS   Mohn,W.W., van der Geize,R., Stewart,G.R., Okamoto,S., Liu,J.,
            Dijkhuizen,L. and Eltis,L.D.
  TITLE     The actinobacterial mce4 locus encodes a steroid transporter
  JOURNAL   J Biol Chem 283 (51), 35368-35374 (2008)
   PUBMED   18955493
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023315.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11887.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..282
                     /product="MCE family protein"
                     /calculated_mol_wt=29186
     Region          <2..186
                     /region_name="Mtu_fam_mce"
                     /note="virulence factor Mce family protein; TIGR00996"
                     /db_xref="CDD:273384"
ORIGIN      
        1 myvegepale dggdiplert ntpieldrmy kalddvslal gpepgeqsgp lnnvitagak
       61 alegngelgg eairnlsaav etfsdnrgpl fenvrslasl seelagndap rqplhrqprr
      121 clvpargera elrkvlaapa rvlgtvrgfv kenrgklakd iellgsvlgt vekekdalal
      181 vaqkgplamg nlaiafdpvt gtfgsrvnaa pafedptqfl cdtlknnaai kqpgevcqll
      241 tdvlapvlgt sqgggangrt agptsqpmap vgdigaligg gq
//
LOCUS       WP_257954485             152 aa            linear   BCT 02-MAR-2025
DEFINITION  hemerythrin domain-containing protein [Nocardioides sp. B-3].
ACCESSION   WP_257954485
VERSION     WP_257954485.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 152)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
REFERENCE   2  (residues 1 to 152)
  AUTHORS   Throup,J.P., Zappacosta,F., Lunsford,R.D., Annan,R.S., Carr,S.A.,
            Lonsdale,J.T., Bryant,A.P., McDevitt,D., Rosenberg,M. and
            Burnham,M.K.
  TITLE     The srhSR gene pair from Staphylococcus aureus: genomic and
            proteomic approaches to the identification and characterization of
            gene function
  JOURNAL   Biochemistry 40 (34), 10392-10401 (2001)
   PUBMED   11513618
REFERENCE   3  (residues 1 to 152)
  AUTHORS   Martins,L.J., Hill,C.P. and Ellis,W.R. Jr.
  TITLE     Structures of wild-type chloromet and L103N hydroxomet Themiste
            zostericola myohemerythrins at 1.8 A resolution
  JOURNAL   Biochemistry 36 (23), 7044-7049 (1997)
   PUBMED   9188702
REFERENCE   4  (residues 1 to 152)
  AUTHORS   Stenkamp,R.E., Sieker,L.C., Jensen,L.H. and McQueen,J.E. Jr.
  TITLE     Structure of methemerythrin at 2.8-Angstrom resolution: computer
            graphics fit of an averaged electron density map
  JOURNAL   Biochemistry 17 (13), 2499-2504 (1978)
   PUBMED   678527
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013936.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01814.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..152
                     /product="hemerythrin domain-containing protein"
                     /calculated_mol_wt=16788
     Region          8..122
                     /region_name="COG5592"
                     /note="Hemerythrin domain-containing protein [General
                     function prediction only]"
                     /db_xref="CDD:444331"
ORIGIN      
        1 mrqlrdsssd rdavrhafse lhvahataee eivypklrrk qaitgheqeh geeehaegne
       61 allkvlelkg tdtqafddav eelckavnhh paeeeltiln pareevgpkv raelgeafak
      121 rrneliargc gslarvraiv kaaereglld da
//
LOCUS       WP_257954549             133 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Nocardioides sp. B-3].
ACCESSION   WP_257954549
VERSION     WP_257954549.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 133)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 133)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 133)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..133
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=14264
     Region          <1..100
                     /region_name="CaiA"
                     /note="Acyl-CoA dehydrogenase related to the alkylation
                     response protein AidB [Lipid transport and metabolism];
                     COG1960"
                     /db_xref="CDD:441563"
ORIGIN      
        1 mgvadgalrl aatylstreq fgrplatfqs aqhqladcwi didamrvtlw qapaslhepd
       61 aarvvlvakw wcdragldvv hrvqhlhggi gvdvdypvhr nflwgkqias tlggsaaala
      121 dlgavlaree vas
//
LOCUS       WP_257954575             190 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Nocardioides sp. B-3].
ACCESSION   WP_257954575
VERSION     WP_257954575.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13751.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..190
                     /product="transposase"
                     /calculated_mol_wt=20131
     Region          <1..183
                     /region_name="transpos_IS1182"
                     /note="IS1182 family transposase; NF033551"
                     /db_xref="CDD:468080"
ORIGIN      
        1 mntrtgwvqg ynaqlavtad hlipalmltr aptdmdclqp mmnaaqsaar tiahtraddg
       61 gddeiglvpa dagycsmdnl tapgpnrlia tgkdrrlade aaddprtgpp ppdasplerm
      121 rhqmktpegl aayahrgatv epvnahlkdq tglrrfsrrg laaatselnl aaavvnllkl
      181 hrhttaalat
//
LOCUS       WP_257954653             137 aa            linear   BCT 02-MAR-2025
DEFINITION  ferredoxin [Nocardioides sp. B-3].
ACCESSION   WP_257954653
VERSION     WP_257954653.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024851.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13459.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..137
                     /product="ferredoxin"
                     /calculated_mol_wt=14330
     Region          <2..51
                     /region_name="NADH_4Fe-4S"
                     /note="NADH-ubiquinone oxidoreductase-F iron-sulfur
                     binding region; pfam10589"
                     /db_xref="CDD:463160"
     Region          74..137
                     /region_name="Fer"
                     /note="Ferredoxin [Energy production and conversion];
                     COG1141"
                     /db_xref="CDD:440756"
ORIGIN      
        1 mcrngtrair dtlakvaegd snpdhrdnla rwgvqlkgrg acafldgaat praqrrrgap
       61 arssitrher rqlmkatvda tkcraygacv dlcpsvflld ewgyasivgd gtvpagdeta
      121 ansaagacpe gaisisd
//
LOCUS       WP_257954682             392 aa            linear   BCT 02-MAR-2025
DEFINITION  thiolase C-terminal domain-containing protein [Nocardioides sp.
            B-3].
ACCESSION   WP_257954682
VERSION     WP_257954682.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 392)
  AUTHORS   Brown,A.K., Sridharan,S., Kremer,L., Lindenberg,S., Dover,L.G.,
            Sacchettini,J.C. and Besra,G.S.
  TITLE     Probing the mechanism of the Mycobacterium tuberculosis
            beta-ketoacyl-acyl carrier protein synthase III mtFabH: factors
            influencing catalysis and substrate specificity
  JOURNAL   J Biol Chem 280 (37), 32539-32547 (2005)
   PUBMED   16040614
REFERENCE   2  (residues 1 to 392)
  AUTHORS   Kursula,P., Ojala,J., Lambeir,A.M. and Wierenga,R.K.
  TITLE     The catalytic cycle of biosynthetic thiolase: a conformational
            journey of an acetyl group through four binding modes and two
            oxyanion holes
  JOURNAL   Biochemistry 41 (52), 15543-15556 (2002)
   PUBMED   12501183
REFERENCE   3  (residues 1 to 392)
  AUTHORS   Scarsdale,J.N., Kazanina,G., He,X., Reynolds,K.A. and Wright,H.T.
  TITLE     Crystal structure of the Mycobacterium tuberculosis
            beta-ketoacyl-acyl carrier protein synthase III
  JOURNAL   J Biol Chem 276 (23), 20516-20522 (2001)
   PUBMED   11278743
REFERENCE   4  (residues 1 to 392)
  AUTHORS   Modis,Y. and Wierenga,R.K.
  TITLE     Crystallographic analysis of the reaction pathway of Zoogloea
            ramigera biosynthetic thiolase
  JOURNAL   J Mol Biol 297 (5), 1171-1182 (2000)
   PUBMED   10764581
REFERENCE   5  (residues 1 to 392)
  AUTHORS   Mathieu,M., Modis,Y., Zeelen,J.P., Engel,C.K., Abagyan,R.A.,
            Ahlberg,A., Rasmussen,B., Lamzin,V.S., Kunau,W.H. and Wierenga,R.K.
  TITLE     The 1.8 A crystal structure of the dimeric peroxisomal
            3-ketoacyl-CoA thiolase of Saccharomyces cerevisiae: implications
            for substrate binding and reaction mechanism
  JOURNAL   J Mol Biol 273 (3), 714-728 (1997)
   PUBMED   9402066
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047238.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22691.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..392
                     /product="thiolase C-terminal domain-containing protein"
                     /calculated_mol_wt=40862
     Region          5..380
                     /region_name="PRK08256"
                     /note="lipid-transfer protein; Provisional"
                     /db_xref="CDD:181327"
ORIGIN      
        1 mespiiagvg mtpftkpgas atydvmaada vrralsdagl eltdvdraya ayvygdstsg
       61 qrglyhvgkt gmpivnvnnn cssgstalwl asqavrsgta dcalafgfeq mqkgalnmmw
      121 tdrpspvrdf idvvarryeg teevpmalll fgaagadyme rygtrpetfl kvtvkarqha
      181 rsnanavfrd pvtveqvlas prlfksltrl qacpptngaa avivctsdfa rahdidsgtr
      241 ipgqglatdt avsfdpddls gvvgygvteq aaaaayeqag lgpgdvdvve lhdcftvnei
      301 layealglta pgtsekfied gdntyggrvv vnpsggllsk ghpigatgla qiteltqqlr
      361 gaiadgrqve gariglqhni gvggagvvtv lg
//
LOCUS       WP_257954693             143 aa            linear   BCT 02-MAR-2025
DEFINITION  MaoC/PaaZ C-terminal domain-containing protein [Nocardioides sp.
            B-3].
ACCESSION   WP_257954693
VERSION     WP_257954693.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 143)
  AUTHORS   Fukui,T., Shiomi,N. and Doi,Y.
  TITLE     Expression and characterization of (R)-specific enoyl coenzyme A
            hydratase involved in polyhydroxyalkanoate biosynthesis by
            Aeromonas caviae
  JOURNAL   J Bacteriol 180 (3), 667-673 (1998)
   PUBMED   9457873
REFERENCE   2  (residues 1 to 143)
  AUTHORS   Steinebach,V., Benen,J.A., Bader,R., Postma,P.W., De Vries,S. and
            Duine,J.A.
  TITLE     Cloning of the maoA gene that encodes aromatic amine oxidase of
            Escherichia coli W3350 and characterization of the overexpressed
            enzyme
  JOURNAL   Eur J Biochem 237 (3), 584-591 (1996)
   PUBMED   8647101
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013722.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01575.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..143
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /calculated_mol_wt=14982
     Region          13..138
                     /region_name="hot_dog"
                     /note="The hotdog fold was initially identified in the E.
                     coli FabA (beta-hydroxydecanoyl-acyl carrier protein
                     (ACP)-dehydratase) structure and subsequently in 4HBT
                     (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A
                     number of other seemingly unrelated...; cl00509"
                     /db_xref="CDD:469797"
     Site            order(60..61,88..91)
                     /site_type="active"
                     /note="active site 2 [active]"
                     /db_xref="CDD:239524"
     Site            order(66,69..70,73,80..82)
                     /site_type="active"
                     /note="active site 1 [active]"
                     /db_xref="CDD:239524"
ORIGIN      
        1 mttpsqftgd iavgtelpps prvksragla vfgpasgdln pihldidvar saglddvfah
       61 gmlsmahlgr litrwvdqrq irglagrfva itpvharptc rgrvtavdei dgerratvel
      121 svsledgtht itgtavialp tpa
//
LOCUS       WP_257954696              60 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Nocardioides sp. B-3].
ACCESSION   WP_257954696
VERSION     WP_257954696.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 60)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 60)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 60)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..60
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..60
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=6698
     Region          <1..60
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
ORIGIN      
        1 maklfgtevq cevvdrclqv fggygymmey piarmyaaar vqkiyggtne imreligrsl
//
LOCUS       WP_257954725             274 aa            linear   BCT 02-MAR-2025
DEFINITION  transglycosylase SLT domain-containing protein [Nocardioides sp.
            B-3].
ACCESSION   WP_257954725
VERSION     WP_257954725.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 274)
  AUTHORS   Koraimann,G.
  TITLE     Lytic transglycosylases in macromolecular transport systems of
            Gram-negative bacteria
  JOURNAL   Cell Mol Life Sci 60 (11), 2371-2388 (2003)
   PUBMED   14625683
REFERENCE   2  (residues 1 to 274)
  AUTHORS   Mushegian,A.R., Fullner,K.J., Koonin,E.V. and Nester,E.W.
  TITLE     A family of lysozyme-like virulence factors in bacterial pathogens
            of plants and animals
  JOURNAL   Proc Natl Acad Sci U S A 93 (14), 7321-7326 (1996)
   PUBMED   8692991
REFERENCE   3  (residues 1 to 274)
  AUTHORS   Thunnissen,A.M., Rozeboom,H.J., Kalk,K.H. and Dijkstra,B.W.
  TITLE     Structure of the 70-kDa soluble lytic transglycosylase complexed
            with bulgecin A. Implications for the enzymatic mechanism
  JOURNAL   Biochemistry 34 (39), 12729-12737 (1995)
   PUBMED   7548026
REFERENCE   4  (residues 1 to 274)
  AUTHORS   Koonin,E.V. and Rudd,K.E.
  TITLE     A conserved domain in putative bacterial and bacteriophage
            transglycosylases
  JOURNAL   Trends Biochem Sci 19 (3), 106-107 (1994)
   PUBMED   8203016
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013618.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01464.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..274
                     /product="transglycosylase SLT domain-containing protein"
                     /calculated_mol_wt=28745
     Region          144..>205
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
     Region          <208..>274
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
ORIGIN      
        1 mdyliqladi lrsygpvfvg gdmnshegdg pvaaatrmsa agfqytkdsg viynfyaapv
       61 aatktwqmsa aavhsdhpal ftrmamnrag pstpstsrpe gcppcpttit svsmsppttt
      121 gpgtmgkana vaesahragf rgedlvtava iagvesawnq rarngshfgl wqistshrgk
      181 vpgwndpddi ydprlnaqya falfsarpga grpssptgsp skrpttasts twpakrlppr
      241 aettprtwpt paapprrsrs ppnsqpssgp astp
//
LOCUS       WP_257954787             310 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Nocardioides sp. B-3].
ACCESSION   WP_257954787
VERSION     WP_257954787.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 310)
  AUTHORS   Maqbool,A., Horler,R.S., Muller,A., Wilkinson,A.J., Wilson,K.S. and
            Thomas,G.H.
  TITLE     The substrate-binding protein in bacterial ABC transporters:
            dissecting roles in the evolution of substrate specificity
  JOURNAL   Biochem Soc Trans 43 (5), 1011-1017 (2015)
   PUBMED   26517916
REFERENCE   2  (residues 1 to 310)
  AUTHORS   Wilkens,S.
  TITLE     Structure and mechanism of ABC transporters
  JOURNAL   F1000Prime Rep 7, 14 (2015)
   PUBMED   25750732
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 310)
  AUTHORS   ter Beek,J., Guskov,A. and Slotboom,D.J.
  TITLE     Structural diversity of ABC transporters
  JOURNAL   J Gen Physiol 143 (4), 419-435 (2014)
   PUBMED   24638992
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10194221
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..310
                     /product="ABC transporter substrate-binding protein"
                     /GO_component="GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=32655
     Region          75..300
                     /region_name="PBP2_peptides_like"
                     /note="Peptide-binding protein and related homologs; type
                     2 periplasmic binding protein fold; cd13530"
                     /db_xref="CDD:270248"
ORIGIN      
        1 mrrvrpcgtg virfeacars papsppphps pyspaltacg aprdeaedaa dpageettsa
       61 dactpdsldt ltagtltigt dspayepwfv dddptngrgy esavafavae qlgyttdrva
      121 rvtvpfnavv spgekkfdfd vnrvsiteqr rkavdfssgy ydvrqtvitn rgsaidgats
      181 padladaklg aqvgttsyta itdvigtseq paafdtndra vqslkngqid givvdlptay
      241 ymtavqldkg mivgqlpaar gdveqfgavl dkdspltdcv sravdalred gildqiasew
      301 leqqgapels
//
LOCUS       WP_257954837             480 aa            linear   BCT 02-MAR-2025
DEFINITION  PHP domain-containing protein [Nocardioides sp. B-3].
ACCESSION   WP_257954837
VERSION     WP_257954837.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 480)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014826.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02811.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..480
                     /product="PHP domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=51333
     Region          1..>455
                     /region_name="DnaE"
                     /note="DNA polymerase III, alpha subunit [Replication,
                     recombination and repair]; COG0587"
                     /db_xref="CDD:440352"
ORIGIN      
        1 mspdpfvhlh vasgyslqyg ashpqtlver aveqemdtla ltdrdgtyga vkftracara
       61 girpvlgvdp avapvgvqpl rgaaartpvr ggahrdlpah rgglprvtfp asgkagwaai
      121 crmvsathlt gergrpvatl eslapylmgg dvmvllgpas elgvaaarrr hdlalaalap
      181 wrdivprdnl vvelvshrlp dssahaarma qiarraeltt vltnavryad rldaptvdvl
      241 daarrlvald rrhvdrgnae gflksgkqmh emaeeicrls glanntemaa rqllaqtrav
      301 adrcaldpra dlgigevhfp efqlgggdgg agrtadgmlr arcdaavgdr hgsaprqriw
      361 krlddeleli rglgyasyfl tvaditdlig emgirraarg sgagspvnyl lgvsgvdpir
      421 hgllmerfls plraslpdid vdvesarrle vyeaipgqvr rgalclrvdd ghlpraprgp
//
LOCUS       WP_257954839             105 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6504 family protein [Nocardioides sp. B-3].
ACCESSION   WP_257954839
VERSION     WP_257954839.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039800.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20114.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..105
                     /product="DUF6504 family protein"
                     /calculated_mol_wt=11896
     Region          9..103
                     /region_name="DUF6504"
                     /note="Family of unknown function (DUF6504); pfam20114"
                     /db_xref="CDD:437946"
ORIGIN      
        1 msgeetqmrl yddpvevrrg etegpdqflw rgrlwkvrav lahwvetapw wqattdaase
       61 sattdllver elwrveagrg ingtgvfdls fnwsdgrwql vgcad
//
LOCUS       WP_257954521             183 aa            linear   BCT 02-MAR-2025
DEFINITION  Holliday junction DNA helicase RuvB C-terminal domain-containing
            protein [Nocardioides sp. B-3].
ACCESSION   WP_257954521
VERSION     WP_257954521.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 183)
  AUTHORS   Dickman,M.J., Ingleston,S.M., Sedelnikova,S.E., Rafferty,J.B.,
            Lloyd,R.G., Grasby,J.A. and Hornby,D.P.
  TITLE     The RuvABC resolvasome
  JOURNAL   Eur J Biochem 269 (22), 5492-5501 (2002)
   PUBMED   12423347
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017317.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05491.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..183
                     /product="Holliday junction DNA helicase RuvB C-terminal
                     domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0009378 - four-way junction helicase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006281 - DNA repair [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /calculated_mol_wt=19796
     Region          <2..118
                     /region_name="RuvB"
                     /note="Holliday junction resolvasome RuvABC, ATP-dependent
                     DNA helicase subunit RuvB [Replication, recombination and
                     repair]; COG2255"
                     /db_xref="CDD:441856"
ORIGIN      
        1 mhrsagllgv eltdegsaei agrsrgtpri anrllrrvrd yaqvradgvv tlevaraale
       61 lyevdesgld rldrgvldal crrfgggpvg vstlavavge eretveevae pflvrlglpg
      121 ahparpdrhr grpapprhda traavrgrlh avrrrltpyt palvararsr apmstssqpk
      181 llr
//
LOCUS       WP_257954873             310 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase [Nocardioides sp. B-3].
ACCESSION   WP_257954873
VERSION     WP_257954873.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 310)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 310)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..310
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=34054
     Region          24..>284
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mpstperpas ppsssapgar swpratgefa qhfpqpgwve hapeeiwqat leatkevlkk
       61 vdsseltaig itnqretvvl wdretlgspr raivwqdrrt adictqlrda gheervselt
      121 glrldpyfsg tklmwlaehe phtralvksg ryavgtvdsy liarmtrgtr hvtdvsnasr
      181 tllfdleggd wsdelcqlfg vprdalpdvv pswgeiapse psvflglslp iagiagdqqs
      241 alfgqtcfde gdskctygtg sfiltntgts vqrsqaglls taawrlprrr phlrqrgrdl
      301 rdrcgrpvaa
//
LOCUS       WP_257954877             388 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Nocardioides sp.
            B-3].
ACCESSION   WP_257954877
VERSION     WP_257954877.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..388
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=41621
     Region          27..>121
                     /region_name="Flavin_Reduct"
                     /note="Flavin reductase like domain; cl46601"
                     /db_xref="CDD:480941"
     Region          <220..382
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mtihsdhpfa tpddaarrlr grlggrvslw tagaatdrag ltvssllvat gdpsfvigll
       61 dpdsdlsdrl rvddarcvvq llswghhdla eqfagqmpap gglfaaadtw letpfgprla
      121 dvetgptass atsarwagrs gsppgssrsc svrmtrcstd vaatptrvqp wltrrsgsww
      181 stttpcgamp ssatcrprgs twlrslrtvt grwpaspaar pqvvvldlqi pgpngvevta
      241 qvlqhdpsar vlilsasgeq ndvleavkag atgylvksas rdelldavrr vaagdtvftp
      301 glagpvlgef rrmadgpadd prdeltdret eilkmvakgm sykqiaerlv ishrtvqnhv
      361 qntlrklqmn nrvqltrwai ehgldded
//
LOCUS       WP_257954882             297 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein
            [Nocardioides sp. B-3].
ACCESSION   WP_257954882
VERSION     WP_257954882.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 297)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..297
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=31151
     Region          82..>226
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mklsrvttsl aaaavlfsaa acggesldna gakadpsast tidasqldea paedkaasvi
       61 naiapddnla aavpaevrer glrmttsegy ppmemfgsdg ktligldpsl graiarklgl
      121 pvtianedfn aqipgvvsdr ydvilssmtd naerqaqvtf vdyvaagagf ivrsgnpdgi
      181 atpadmcgqt vsvvdngssl glpeaydaec tdagedaidi lkfpgdrkrc frsatgapra
      241 qhhrlrrggn qggrsqagdr raadrrhrva pghrprprgr gadrrrpgsa rrphrqr
//
LOCUS       WP_257954910             257 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2142 domain-containing protein [Nocardioides sp. B-3].
ACCESSION   WP_257954910
VERSION     WP_257954910.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021436.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09913.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..257
                     /product="DUF2142 domain-containing protein"
                     /calculated_mol_wt=27182
     Region          8..>179
                     /region_name="PMT_2"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; cl21590"
                     /db_xref="CDD:473917"
ORIGIN      
        1 maafagvlll qsawmtalpm frgpdeiehl lrasnvglgh wlpadlprye dplivtvqrd
       61 lanattptcl klreglkpef ctpkhlnsdg tvdirsnval ynplyyavvg tplkipegev
      121 gawavralgg vlsalmmawg wvlvasrrrt nwpcvaflva ltpaiifatt vaapngmsya
      181 aglllwagll ssradsrspt apaasavgac vvvlthttgi iwvgaavltm lclvgwgack
      241 afwwfglarg spasdvs
//
LOCUS       WP_257954894             393 aa            linear   BCT 02-MAR-2025
DEFINITION  histidine kinase [Nocardioides sp. B-3].
ACCESSION   WP_257954894
VERSION     WP_257954894.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 393)
  AUTHORS   Grebe,T.W. and Stock,J.B.
  TITLE     The histidine protein kinase superfamily
  JOURNAL   Adv Microb Physiol 41, 139-227 (1999)
   PUBMED   10500846
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019350.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07730.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..393
                     /product="histidine kinase"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=41698
     Region          225..>334
                     /region_name="ComP"
                     /note="Signal transduction histidine kinase ComP [Signal
                     transduction mechanisms]; COG4585"
                     /db_xref="CDD:443642"
ORIGIN      
        1 msapeqpall aylavppiva gvrhglvtti navvtgvvav lvtvsvtpts aelgrlasat
       61 pwlvvglgtg ipaswqsrsv rilearqapy vaanqlmsql hqlaqrgrlg ldsaqlaael
      121 eaalrsatga essavfvhgt ddsvsllsfh gdaaamfalr dqlaqssrtl pdvaelplrs
      181 adkvrgtvll irssgwtdae rasaqeiadd yvvrldtavl fddvrliata eernrlarem
      241 hdgvaqevva lgyivdeiet lsnepetral aaalrdeisr vvtelrfsif dlrhhvaehr
      301 lsgapaeyvr evshgtdlrv hllldesgpp aqldrvraap grprghrqra qalpchelvg
      361 lavlrleags pcgsrttasa tpcpasgtgv crp
//
LOCUS       WP_257954981             153 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Nocardioides sp. B-3].
ACCESSION   WP_257954981
VERSION     WP_257954981.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..153
                     /product="AMP-binding protein"
                     /calculated_mol_wt=15780
     Region          4..>96
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
ORIGIN      
        1 mstldwfrkp aaddpgtlna cynavdvhvi rghaeqvavl dgdrpvsfar lltdvgafag
       61 vlqafgvgpg aevvlidapa yedtvvqlac arvgavlfre aspkpgpavv gtaaahdfgd
      121 aplvtiddsg eldwatampr rahgpgglrr rpg
//
LOCUS       WP_257955010             281 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Nocardioides sp. B-3].
ACCESSION   WP_257955010
VERSION     WP_257955010.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 281)
  AUTHORS   Zhang,Y.L., Arakawa,E. and Leung,K.Y.
  TITLE     Novel Aeromonas hydrophila PPD134/91 genes involved in O-antigen
            and capsule biosynthesis
  JOURNAL   Infect Immun 70 (5), 2326-2335 (2002)
   PUBMED   11953367
  REMARK    Erratum:[Infect Immun 2002 Jun;70(6):3308]
REFERENCE   2  (residues 1 to 281)
  AUTHORS   Swartley,J.S., Liu,L.J., Miller,Y.K., Martin,L.E., Edupuganti,S.
            and Stephens,D.S.
  TITLE     Characterization of the gene cassette required for biosynthesis of
            the (alpha1-->6)-linked N-acetyl-D-mannosamine-1-phosphate capsule
            of serogroup A Neisseria meningitidis
  JOURNAL   J Bacteriol 180 (6), 1533-1539 (1998)
   PUBMED   9515923
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025025.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13641.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..281
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=31378
     Region          <11..169
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
ORIGIN      
        1 mrwsspaapt rgyaggsnvg irrctergnd fvwllnpdtr iepetlprll tlladvpdcg
       61 vvgprlvhpa apdapetvwf dggivdeska getrhlhrgr evakvaapia rdvdyvtgas
      121 lltrrtvlet vgllpedyfl yfeethwcrd vhragwrvmv eqrarmvhhq rssgalpspy
      181 hlyymtrnry lfveralgad geaalaqleg kwlknwrrkv atpapewlde fdalvaraaa
      241 daragrdgrn davshvpwpa dvqrdgdlad asrertevge r
//
LOCUS       WP_257955030             105 aa            linear   BCT 02-MAR-2025
DEFINITION  solute carrier family 23 protein [Nocardioides sp. B-3].
ACCESSION   WP_257955030
VERSION     WP_257955030.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 105)
  AUTHORS   Hogue,D.L. and Ling,V.
  TITLE     A human nucleobase transporter-like cDNA (SLC23A1): member of a
            transporter family conserved from bacteria to mammals
  JOURNAL   Genomics 59 (1), 18-23 (1999)
   PUBMED   10395795
REFERENCE   2  (residues 1 to 105)
  AUTHORS   Tsukaguchi,H., Tokui,T., Mackenzie,B., Berger,U.V., Chen,X.Z.,
            Wang,Y., Brubaker,R.F. and Hediger,M.A.
  TITLE     A family of mammalian Na+-dependent L-ascorbic acid transporters
  JOURNAL   Nature 399 (6731), 70-75 (1999)
   PUBMED   10331392
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013056.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00860.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..105
                     /product="solute carrier family 23 protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=10678
     Region          <1..75
                     /region_name="Xan_ur_permease"
                     /note="Permease family; cl23746"
                     /db_xref="CDD:474042"
ORIGIN      
        1 mksryvvaaa gvimvmigpv pkagaivagi phpvlggaai amfatvavvg fqtlakvdfn
       61 dhrnvvivat sigsgnvrdr paagraggpe lgrdhlrqrh hpraa
//
LOCUS       WP_257955041             335 aa            linear   BCT 02-MAR-2025
DEFINITION  solute carrier family 23 protein [Nocardioides sp. B-3].
ACCESSION   WP_257955041
VERSION     WP_257955041.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 335)
  AUTHORS   Hogue,D.L. and Ling,V.
  TITLE     A human nucleobase transporter-like cDNA (SLC23A1): member of a
            transporter family conserved from bacteria to mammals
  JOURNAL   Genomics 59 (1), 18-23 (1999)
   PUBMED   10395795
REFERENCE   2  (residues 1 to 335)
  AUTHORS   Tsukaguchi,H., Tokui,T., Mackenzie,B., Berger,U.V., Chen,X.Z.,
            Wang,Y., Brubaker,R.F. and Hediger,M.A.
  TITLE     A family of mammalian Na+-dependent L-ascorbic acid transporters
  JOURNAL   Nature 399 (6731), 70-75 (1999)
   PUBMED   10331392
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013056.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00860.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..335
                     /product="solute carrier family 23 protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=34675
     Region          21..>306
                     /region_name="Xan_ur_permease"
                     /note="Permease family; cl23746"
                     /db_xref="CDD:474042"
ORIGIN      
        1 mpvstrpedq rhppgqllay gtqhiltmyg gviapplivg gaaglsasdm allvtaglfv
       61 sgfatllqtl glgpfgsrlp ivqgisfasv stmvaiased glrpvfgaii vagligpvls
      121 sffaqlvrlf pavvtgslit viglslmpvs frwamgndes asdfgsmani gfagltllii
      181 pvisrlfpga vsrlsillgl vvgtmiaala gradfsavgd arpfaapail hfgtptfeig
      241 aivsmtvvml vimtettadi paigeivdte vdakrvargl radmaattva plfgsfpcsa
      301 faqnvgfgra drhpeqvrrr dgrllscccs dcsrw
//
LOCUS       WP_257955058             441 aa            linear   BCT 02-MAR-2025
DEFINITION  DAK2 domain-containing protein [Nocardioides sp. B-3].
ACCESSION   WP_257955058
VERSION     WP_257955058.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014754.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02734.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..441
                     /product="DAK2 domain-containing protein"
                     /GO_function="GO:0004371 - glycerone kinase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006071 - glycerol metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=45524
     Region          34..>405
                     /region_name="YloV"
                     /note="Predicted kinase related to dihydroxyacetone kinase
                     [General function prediction only]; COG1461"
                     /db_xref="CDD:441070"
ORIGIN      
        1 mrrstrstsi pcptatpapt csspsprpat rsseaiaedp eldttaafri vargalpgar
       61 gnsgvilsqm lgayvsrlae ddgtvqnalv vaeamqratd asyaavgvpv egtilsvsra
      121 asdaamaraa legartrdvf taaaaaarea lartptqlka padagvvdag grglcvvlda
      181 aetvstgrrp ppapagvhri pvplhalagd adltpdgpsy evmylldaed taipvlkkvl
      241 galgdspvvv gsdrlwnvhv hvddvgaaie agieagrpyr vrvthfaeqv aeaaqarrpt
      301 trtgrkvvav aagpglaalf eeagavvvag gpgqrpstgq ileaimqcga aevvvlpnda
      361 dsvrvaeiaa rtaeesgeir vevvasqarv rglaaiavhe pgrtfgpgrp rddrhraprp
      421 prrhhrrrqa gdddgrpvra r
//
LOCUS       WP_257955065             490 aa            linear   BCT 02-MAR-2025
DEFINITION  AlkA N-terminal domain-containing protein [Nocardioides sp. B-3].
ACCESSION   WP_257955065
VERSION     WP_257955065.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 490)
  AUTHORS   Labahn,J., Scharer,O.D., Long,A., Ezaz-Nikpay,K., Verdine,G.L. and
            Ellenberger,T.E.
  TITLE     Structural basis for the excision repair of alkylation-damaged DNA
  JOURNAL   Cell 86 (2), 321-329 (1996)
   PUBMED   8706136
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017809.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06029.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..490
                     /product="AlkA N-terminal domain-containing protein"
                     /calculated_mol_wt=52597
     Region          1..375
                     /region_name="AdaA"
                     /note="Methylphosphotriester-DNA--protein-cysteine
                     methyltransferase (N-terminal fragment of Ada), contains
                     Zn-binding and two AraC-type DNA-binding domains
                     [Replication, recombination and repair]; COG2169"
                     /db_xref="CDD:441772"
     Region          325..481
                     /region_name="ENDO3c"
                     /note="endonuclease III; includes endonuclease III
                     (DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA
                     glycosidases (Alka-family) and other DNA glycosidases;
                     cd00056"
                     /db_xref="CDD:238013"
     Site            order(335..337,340,385)
                     /site_type="active"
                     /note="minor groove reading motif [active]"
                     /db_xref="CDD:238013"
     Site            421..428
                     /site_type="other"
                     /note="helix-hairpin-helix signature motif"
                     /db_xref="CDD:238013"
     Site            order(431,476,480)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:238013"
     Site            447
                     /site_type="active"
                     /db_xref="CDD:238013"
ORIGIN      
        1 mqrtdmdpes cyravksrdr rfdgvfytcv attgiycrps cpartpgfan vtfrptaaac
       61 raagfrackr clpdatpgsp dwdvaadvag rtmrliadgl vdregvdgla arvgytprhl
      121 grlltnelga gplapararr aqtariliet tdmtfadvaf aagfssvrqf netvrevyav
      181 sptdlrgrrg rpkvadgtvv mrlpvrtpya gtellgflsl raipgveive gdtyartlal
      241 phgpgtirlt lpdvpdegtt afvraelalt dlrdtsaave rarrlldadc dpmavadafa
      301 gdqllgplvr qtpglrvpgh vdgneiavra vlgqqvsvag artvaarltr ehgvkirttv
      361 pglthlfpsm eaiaaidped lpmpraggra ltglcralae kvvvldrgdd rdavraglld
      421 lpgigpwtad yiamralghp dvflttdlgt rdalerlgap adldtdawrp rrsyaqtylw
      481 hslsqtqgdn
//
LOCUS       WP_257954890             275 aa            linear   BCT 02-MAR-2025
DEFINITION  ArsA-related P-loop ATPase [Nocardioides sp. B-3].
ACCESSION   WP_257954890
VERSION     WP_257954890.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 275)
  AUTHORS   Rosen,B.P.
  TITLE     The plasmid-encoded arsenical resistance pump: an
            anion-translocating ATPase
  JOURNAL   Res Microbiol 141 (3), 336-341 (1990)
   PUBMED   1704144
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014433.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02374.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..275
                     /product="ArsA-related P-loop ATPase"
                     /calculated_mol_wt=29086
     Region          2..>85
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Region          154..>246
                     /region_name="ArsA"
                     /note="Anion-transporting ATPase, ArsA/GET3 family
                     [Inorganic ion transport and metabolism]; COG0003"
                     /db_xref="CDD:439774"
ORIGIN      
        1 maeqttssiv idappaevma viadfesyps watgvttadv tvqgadgrae qvyfaldvtp
       61 ikdeytlvyd wdgdrqvtld prrgqdaqgt grllrasrhg hrfdrghllp garrldpadr
      121 haqaqgredp hrrgaqgpee arrvalstqp rrvrillftg kggvgkstia agtatlsaas
      181 ghrtlvlstd aahsladafg apagaeptev spglfvqqvd aqlrfeqswa eiqsyllrvl
      241 dvagvdpgrc rgtcshprgg gsagparaag pgpqr
//
LOCUS       WP_257955093              75 aa            linear   BCT 02-MAR-2025
DEFINITION  FitA-like ribbon-helix-helix domain-containing protein
            [Nocardioides sp. B-3].
ACCESSION   WP_257955093
VERSION     WP_257955093.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 75)
  AUTHORS   Mattison,K., Wilbur,J.S., So,M. and Brennan,R.G.
  TITLE     Structure of FitAB from Neisseria gonorrhoeae bound to DNA reveals
            a tetramer of toxin-antitoxin heterodimers containing pin domains
            and ribbon-helix-helix motifs
  JOURNAL   J Biol Chem 281 (49), 37942-37951 (2006)
   PUBMED   16982615
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046758.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22513.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..75
                     /product="FitA-like ribbon-helix-helix domain-containing
                     protein"
                     /calculated_mol_wt=8178
     Region          3..75
                     /region_name="StbC1"
                     /note="Plasmid stability protein StbC1, contains
                     ribbon-helix-helix domain [Defense mechanisms]; COG4691"
                     /db_xref="CDD:443726"
ORIGIN      
        1 meqilirnlp agtkaalrar akqrhrslea eardmltral egepltivel lgtdegadie
       61 feperlglta rsaql
//
LOCUS       WP_257955119             128 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Nocardioides sp. B-3].
ACCESSION   WP_257955119
VERSION     WP_257955119.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 128)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 128)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..128
                     /product="VOC family protein"
                     /calculated_mol_wt=13857
     Region          17..127
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mprerwvgkd rvmgvrrvvp dlasasldaa kdfygdvlgl lpvmdhgwiv tladperana
       61 rvnlmshdat aavipaasie vddvdacysa aihvgaeivh pltdepwgvr rffvrdpdgh
      121 vinvlshp
//
LOCUS       WP_257955148             136 aa            linear   BCT 02-MAR-2025
DEFINITION  SRPBCC family protein [Nocardioides sp. B-3].
ACCESSION   WP_257955148
VERSION     WP_257955148.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 136)
  AUTHORS   Iyer,L.M., Koonin,E.V. and Aravind,L.
  TITLE     Adaptations of the helix-grip fold for ligand binding and catalysis
            in the START domain superfamily
  JOURNAL   Proteins 43 (2), 134-144 (2001)
   PUBMED   11276083
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10604.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..136
                     /product="SRPBCC family protein"
                     /calculated_mol_wt=14159
ORIGIN      
        1 mpssaippgc prsrrrpgrc cvdarapagw apassastat aatsgrprgk vtdadpgrrf
       61 afdveavpgv pvarwqydie ptatgcrvve stwdrraarf akastpitgv adretanthn
      121 iattlgrlks aleata
//
LOCUS       WP_257955158              72 aa            linear   BCT 02-MAR-2025
DEFINITION  DsbA family protein [Nocardioides sp. B-3].
ACCESSION   WP_257955158
VERSION     WP_257955158.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 72)
  AUTHORS   Laurie,A.D. and Lloyd-Jones,G.
  TITLE     The phn genes of Burkholderia sp. strain RP007 constitute a
            divergent gene cluster for polycyclic aromatic hydrocarbon
            catabolism
  JOURNAL   J Bacteriol 181 (2), 531-540 (1999)
   PUBMED   9882667
REFERENCE   2  (residues 1 to 72)
  AUTHORS   Hu,S.H., Peek,J.A., Rattigan,E., Taylor,R.K. and Martin,J.L.
  TITLE     Structure of TcpG, the DsbA protein folding catalyst from Vibrio
            cholerae
  JOURNAL   J Mol Biol 268 (1), 137-146 (1997)
   PUBMED   9149147
REFERENCE   3  (residues 1 to 72)
  AUTHORS   Brito,B., Palacios,J.M., Ruiz-Argueso,T. and Imperial,J.
  TITLE     Identification of a gene for a chemoreceptor of the
            methyl-accepting type in the symbiotic plasmid of Rhizobium
            leguminosarum bv. viciae UPM791
  JOURNAL   Biochim Biophys Acta 1308 (1), 7-11 (1996)
   PUBMED   8765742
REFERENCE   4  (residues 1 to 72)
  AUTHORS   Eaton,R.W.
  TITLE     Organization and evolution of naphthalene catabolic pathways:
            sequence of the DNA encoding 2-hydroxychromene-2-carboxylate
            isomerase and trans-o-hydroxybenzylidenepyruvate hydratase-aldolase
            from the NAH7 plasmid
  JOURNAL   J Bacteriol 176 (24), 7757-7762 (1994)
   PUBMED   8002605
REFERENCE   5  (residues 1 to 72)
  AUTHORS   Denome,S.A., Stanley,D.C., Olson,E.S. and Young,K.D.
  TITLE     Metabolism of dibenzothiophene and naphthalene in Pseudomonas
            strains: complete DNA sequence of an upper naphthalene catabolic
            pathway
  JOURNAL   J Bacteriol 175 (21), 6890-6901 (1993)
   PUBMED   8226631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01323.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..72
                     /product="DsbA family protein"
                     /GO_function="GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=7950
     Region          3..>72
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 mridiwsdvv cpwcfigkrr pekalstfeh addveivwhs fqldpgaptt pvetvaealg
       61 rkygggrpag rr
//
LOCUS       WP_257955226             126 aa            linear   BCT 02-MAR-2025
DEFINITION  FtsW/RodA/SpoVE family cell cycle protein [Nocardioides sp. B-3].
ACCESSION   WP_257955226
VERSION     WP_257955226.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 126)
  AUTHORS   Henriques,A.O., Glaser,P., Piggot,P.J. and Moran,C.P. Jr.
  TITLE     Control of cell shape and elongation by the rodA gene in Bacillus
            subtilis
  JOURNAL   Mol Microbiol 28 (2), 235-247 (1998)
   PUBMED   9622350
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013279.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01098.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..126
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0051301 - cell division [Evidence IEA]"
                     /calculated_mol_wt=13258
     Region          <2..108
                     /region_name="FTSW_RODA_SPOVE"
                     /note="Cell cycle protein; cl00511"
                     /db_xref="CDD:469799"
ORIGIN      
        1 mpeqhtdfif tvageelglv gagllialla iviwralais adtddmfgri aaagiacwfg
       61 frafqnigmc lgimpvtgvp lpfvsyggss mfagmlalgl lqnihlrssa alptrllatp
      121 rvlvrr
//
LOCUS       WP_257955246             296 aa            linear   BCT 02-MAR-2025
DEFINITION  M1 family aminopeptidase [Nocardioides sp. B-3].
ACCESSION   WP_257955246
VERSION     WP_257955246.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 296)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01433.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..296
                     /product="M1 family aminopeptidase"
                     /GO_function="GO:0008237 - metallopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=32610
     Region          6..>281
                     /region_name="GluZincin"
                     /note="Gluzincin Peptidase family (thermolysin-like
                     proteinases, TLPs) which includes peptidases M1, M2, M3,
                     M4, M13, M32 and M36 (fungalysins); cl14813"
                     /db_xref="CDD:472708"
ORIGIN      
        1 mpgtnltrde aatraalpdv tsyaidldlt tgdktfastt tisftsrevg aetfadldga
       61 avrsitlngr aldiasayvd srialddlqa antlvvtadl pysntgeglh rfvdpaddrv
      121 ylysqfevpd arrvfttfeq pdlksvftfn vtapshwkvv staptpepkd lgdgkavwnf
      181 pvtermstyv tavvageyhe vldtyegkfg tiplghycrq smvehmdtdv lveltvqsfe
      241 ffeekfdfpy pfhkydqlyv peynmgamen vgcvtlrdey lpapgsrars sssapp
//
LOCUS       WP_257955272             173 aa            linear   BCT 02-MAR-2025
DEFINITION  MauE/DoxX family redox-associated membrane protein [Nocardioides
            sp. B-3].
ACCESSION   WP_257955272
VERSION     WP_257955272.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 173)
  AUTHORS   van der Palen,C.J., Reijnders,W.N., de Vries,S., Duine,J.A. and van
            Spanning,R.J.
  TITLE     MauE and MauD proteins are essential in methylamine metabolism of
            Paracoccus denitrificans
  JOURNAL   Antonie Van Leeuwenhoek 72 (3), 219-228 (1997)
   PUBMED   9403107
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018942.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07291.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..173
                     /product="MauE/DoxX family redox-associated membrane
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0030416 - methylamine metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=18142
     Region          8..>103
                     /region_name="DoxX"
                     /note="cl21527"
                     /db_xref="CDD:451291"
ORIGIN      
        1 mkqwigllar litggvwiva galklpdpas svravrayel lpesvvptvg halpvvevvl
       61 gvctvlgllt rtmgvlssll fvafivgisa awarglsidc gcfggggeia datakypwei
      121 ardvglllls arlviwprtr wsldavvfsp ragevspgpg egeeldveaq qdr
//
LOCUS       WP_257955291             369 aa            linear   BCT 02-MAR-2025
DEFINITION  alkaline phosphatase family protein [Nocardioides sp. B-3].
ACCESSION   WP_257955291
VERSION     WP_257955291.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 369)
  AUTHORS   Jin-Hua,P., Goding,J.W., Nakamura,H. and Sano,K.
  TITLE     Molecular cloning and chromosomal localization of PD-Ibeta (PDNP3),
            a new member of the human phosphodiesterase I genes
  JOURNAL   Genomics 45 (2), 412-415 (1997)
   PUBMED   9344668
REFERENCE   2  (residues 1 to 369)
  AUTHORS   Peiffer,W.E., Desrosiers,M.G. and Menick,D.R.
  TITLE     Cloning and expression of the unique Ca2+-ATPase from
            Flavobacterium odoratum
  JOURNAL   J Biol Chem 271 (9), 5095-5100 (1996)
   PUBMED   8617788
REFERENCE   3  (residues 1 to 369)
  AUTHORS   Deissler,H., Lottspeich,F. and Rajewsky,M.F.
  TITLE     Affinity purification and cDNA cloning of rat neural
            differentiation and tumor cell surface antigen gp130RB13-6 reveals
            relationship to human and murine PC-1
  JOURNAL   J Biol Chem 270 (17), 9849-9855 (1995)
   PUBMED   7730366
REFERENCE   4  (residues 1 to 369)
  AUTHORS   Murata,J., Lee,H.Y., Clair,T., Krutzsch,H.C., Arestad,A.A.,
            Sobel,M.E., Liotta,L.A. and Stracke,M.L.
  TITLE     cDNA cloning of the human tumor motility-stimulating protein,
            autotaxin, reveals a homology with phosphodiesterases
  JOURNAL   J Biol Chem 269 (48), 30479-30484 (1994)
   PUBMED   7982964
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01663.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..369
                     /product="alkaline phosphatase family protein"
                     /calculated_mol_wt=38688
     Region          47..323
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
     Site            order(54,94,206,254..255)
                     /site_type="active"
                     /db_xref="CDD:293732"
     Site            order(54,94,206,255)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293732"
ORIGIN      
        1 mhrlgvvlsa ltvslsggia caaasdgpda arptverrld tvgpidtvva isidglnpna
       61 itklgrrgap tlhklirqga ttlnartele ltdtlpnhtg mvtgrrieaa tgghgvtrnd
      121 drrtpatvqa aaghdvssvf nvvhdaggdt ayfasktkfs lwerswpeai dadvivennk
      181 alvanfpgdl tnetrsfrfl hlsapdvagh atgfmgpgyl ravtatdrlv grvlravkas
      241 ptlaghtaii ltsdhggrga shrapnrpan ytvpfmvwgp dvarganlya inptysapgr
      301 tqttyadspi rngdvanlal dllelpavpr qraqpgpgpd rvhrsagvgh glnrqpsraf
      361 dcciitgag
//
LOCUS       WP_257955362             188 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein [Nocardioides sp. B-3].
ACCESSION   WP_257955362
VERSION     WP_257955362.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 188)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..188
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=20510
     Region          <1..176
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
ORIGIN      
        1 mgdvtdftnf mgaviddraf akhkkaiarv rankhltlla ggqtddsvgw fvrptiiqst
       61 dptdqmfsde yfgpipavhv ydddkfesvv aqmesfapya ltgaiiaqdr aaiararrel
      121 rfaagnfyin dkptgavvgq qpfgggrasg tndkagaavn llrwtsprsi ketfvppkdh
      181 hypymdae
//
LOCUS       WP_257955411              99 aa            linear   BCT 02-MAR-2025
DEFINITION  glutaredoxin domain-containing protein [Nocardioides sp. B-3].
ACCESSION   WP_257955411
VERSION     WP_257955411.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012675.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00462.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..99
                     /product="glutaredoxin domain-containing protein"
                     /GO_function="GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=10374
     Region          22..97
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 mlghrpssvs aaegaqaaae gkvviywrkg cpftkrlrlv lgkrgakavw vdiwadadaa
       61 ayvrsvndgn etvptvvidg eahanpppkl vvdalartv
//
LOCUS       WP_257955436             479 aa            linear   BCT 02-MAR-2025
DEFINITION  FG-GAP-like repeat-containing protein [Nocardioides sp. B-3].
ACCESSION   WP_257955436
VERSION     WP_257955436.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13517.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..479
                     /product="FG-GAP-like repeat-containing protein"
                     /calculated_mol_wt=52140
     Region          <33..154
                     /region_name="BglS"
                     /note="Beta-glucanase, GH16 family [Carbohydrate transport
                     and metabolism]; COG2273"
                     /db_xref="CDD:441874"
     Region          300..367
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
ORIGIN      
        1 mgqstvdgrt vvelrpeahl efsspvpfep gttyrvsatl kmpsetgvhp afwlrtrdlq
       61 rageidives wgdraqcsrv qvayywrysp pigrvecagd rypqdmdawh dyaveftyrg
      121 pgqdpaapaa sptrffvdgv etrstphapv saeflrlqnk rncpdeeqpt cgetstspsm
      181 yvddvtvevv grvptgapad liavrttgtg aeahvvsaas gyaaysnqtp mpvtgrgwrf
      241 tsgdvngdra tdvygirmag rntaqvqvmd gtnllqsslt hativdrrgg lgrtrfpagd
      301 vdgngrddly lvsttpsgrt hltvldattg fqtkladvdl papalprdrw ritvgdynfd
      361 grddlylvdt ragtqtavhv ldartefmsw laqthtaapa pdtspgrhdg grqrgrpgrs
      421 rargpgrrgg drdalpgrgd rihhlrprga hrpasddrrh lgdhrltgan grlvgsrhe
//
LOCUS       WP_257955464              79 aa            linear   BCT 02-MAR-2025
DEFINITION  TOBE domain-containing protein [Nocardioides sp. B-3].
ACCESSION   WP_257955464
VERSION     WP_257955464.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 79)
  AUTHORS   Koonin,E.V., Wolf,Y.I. and Aravind,L.
  TITLE     Protein fold recognition using sequence profiles and its
            application in structural genomics
  JOURNAL   Adv Protein Chem 54, 245-275 (2000)
   PUBMED   10829230
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015424.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03459.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..79
                     /product="TOBE domain-containing protein"
                     /calculated_mol_wt=8237
     Region          11..69
                     /region_name="TOBE"
                     /note="TOBE domain; cl01440"
                     /db_xref="CDD:470204"
ORIGIN      
        1 mtvslrrpeg sarlqwqgqv asaqqhgdaa rllvsseppl ladvtpqaaa elglapgrev
       61 wlsvkatavs rygttaddr
//
LOCUS       WP_257955510              72 aa            linear   BCT 02-MAR-2025
DEFINITION  recombinase-like helix-turn-helix domain-containing protein
            [Nocardioides sp. B-3].
ACCESSION   WP_257955510
VERSION     WP_257955510.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042599.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20552.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..72
                     /product="recombinase-like helix-turn-helix
                     domain-containing protein"
                     /calculated_mol_wt=7782
     Region          1..72
                     /region_name="HTH_62"
                     /note="Recombinase-like helix-turn-helix domain;
                     pfam20552"
                     /db_xref="CDD:466701"
ORIGIN      
        1 mpeqylvqnq thphplspye eklsgalmev fatgthdlpg lvagvnsmgl hapdgnawte
       61 dnlraemrrl gd
//
LOCUS       WP_257955592             396 aa            linear   BCT 02-MAR-2025
DEFINITION  AarF/UbiB family protein [Nocardioides sp. B-3].
ACCESSION   WP_257955592
VERSION     WP_257955592.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 396)
  AUTHORS   Macinga,D.R., Cook,G.M., Poole,R.K. and Rather,P.N.
  TITLE     Identification and characterization of aarF, a locus required for
            production of ubiquinone in Providencia stuartii and Escherichia
            coli and for expression of 2'-N-acetyltransferase in P. stuartii
  JOURNAL   J Bacteriol 180 (1), 128-135 (1998)
   PUBMED   9422602
REFERENCE   2  (residues 1 to 396)
  AUTHORS   Bousquet,I., Dujardin,G. and Slonimski,P.P.
  TITLE     ABC1, a novel yeast nuclear gene has a dual function in
            mitochondria: it suppresses a cytochrome b mRNA translation defect
            and is essential for the electron transfer in the bc 1 complex
  JOURNAL   EMBO J 10 (8), 2023-2031 (1991)
   PUBMED   1648478
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015094.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03109.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..396
                     /product="AarF/UbiB family protein"
                     /calculated_mol_wt=42936
     Region          1..>266
                     /region_name="AarF"
                     /note="Predicted protein kinase regulating ubiquinone
                     biosynthesis, AarF/ABC1/UbiB family [Coenzyme transport
                     and metabolism, Signal transduction mechanisms]; COG0661"
                     /db_xref="CDD:440425"
     Region          305..>388
                     /region_name="PHA03381"
                     /note="tegument protein VP22; Provisional"
                     /db_xref="CDD:177618"
ORIGIN      
        1 mqqrtaeqlf ktlgelkgga mkfgralsvl eaalpdelva pyranltklq ddappmptqt
       61 vrdqlendlg ptrkkqlvwl dggptaaasi gqvhkgrwsd grdvavkvqy pgagealmgd
      121 lrqlarpakg iapvfpgidi kplvaelqar aadeldysle aeaqrafaea flddpdfvvp
      181 dvvasgekvl vtewlespys lahviregtq eernhygell arflfsgpar tgmlhadphp
      241 gnfrpipetg qlgvldfgav arlperhlpr dghadpgrar rrarpagrra argglhqgqr
      301 egrpaarprl plavhragar relplqppvd adavradqqp arprlhdrhq aqpadelpad
      361 pphsarrprp aqpargggav prdprgepsg vrgltr
//
LOCUS       WP_257955594             140 aa            linear   BCT 02-MAR-2025
DEFINITION  WS/DGAT domain-containing protein [Nocardioides sp. B-3].
ACCESSION   WP_257955594
VERSION     WP_257955594.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 140)
  AUTHORS   Petronikolou,N. and Nair,S.K.
  TITLE     Structural and Biochemical Studies of a Biocatalyst for the
            Enzymatic Production of Wax Esters
  JOURNAL   ACS Catal 8 (7), 6334-6344 (2018)
   PUBMED   31559109
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018657.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06974.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..140
                     /product="WS/DGAT domain-containing protein"
                     /GO_function="GO:0004144 - diacylglycerol
                     O-acyltransferase activity [Evidence IEA]"
                     /calculated_mol_wt=15031
     Region          <2..134
                     /region_name="acyl_WS_DGAT"
                     /note="acyltransferase, WS/DGAT/MGAT; TIGR02946"
                     /db_xref="CDD:274360"
ORIGIN      
        1 mddpieriar iksstrlgke rlpdvggmam daytaalmlp fmaqaifgfg grgkpasnpv
       61 isnvpgpaet ryldgsqlie fypvsllfng ralnvtavsy dgkfnvgytg crdsipslqr
      121 iavysgeeld kleerlgiva
//
LOCUS       WP_257955629             109 aa            linear   BCT 02-MAR-2025
DEFINITION  dTDP-4-dehydrorhamnose 3,5-epimerase family protein [Nocardioides
            sp. B-3].
ACCESSION   WP_257955629
VERSION     WP_257955629.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013103.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00908.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..109
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase family
                     protein"
                     /GO_function="GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA]"
                     /calculated_mol_wt=11701
     Region          <2..>63
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 mrglhvrlga genklvrcsa gsifdvvvdl rpgsptfmew asfelsgdtq kslyvpagca
       61 hgfrgahrag rhllsdrpgp rpglrpdhra rrsrardlva tadhpdvpg
//
LOCUS       WP_257955664             129 aa            linear   BCT 02-MAR-2025
DEFINITION  maleylpyruvate isomerase N-terminal domain-containing protein
            [Nocardioides sp. B-3].
ACCESSION   WP_257955664
VERSION     WP_257955664.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11716.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..129
                     /product="maleylpyruvate isomerase N-terminal
                     domain-containing protein"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=14462
     Region          9..>72
                     /region_name="TIGR03083"
                     /note="uncharacterized Actinobacterial protein TIGR03083"
                     /db_xref="CDD:274422"
ORIGIN      
        1 mdtqtvwahi hterralaat ladsapeqwl adslcagwtv hdvaahvish padrlgpdar
       61 dggpelrprl qrddlprgqa hgceldprdd prrlrhlrrl deegpdhdgp rtphrrarpp
      121 prtssdrwa
//
LOCUS       WP_257955669             143 aa            linear   BCT 02-MAR-2025
DEFINITION  L-lactate permease [Nocardioides sp. B-3].
ACCESSION   WP_257955669
VERSION     WP_257955669.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 143)
  AUTHORS   Dong,J.M., Taylor,J.S., Latour,D.J., Iuchi,S. and Lin,E.C.
  TITLE     Three overlapping lct genes involved in L-lactate utilization by
            Escherichia coli
  JOURNAL   J Bacteriol 175 (20), 6671-6678 (1993)
   PUBMED   8407843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014683.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02652.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..143
                     /product="L-lactate permease"
                     /GO_component="GO:0005886 - plasma membrane [Evidence
                     IEA]"
                     /GO_function="GO:0015129 - lactate transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0015727 - lactate transport [Evidence
                     IEA]"
                     /calculated_mol_wt=15595
     Region          12..>116
                     /region_name="LldP"
                     /note="L-lactate permease [Energy production and
                     conversion]; COG1620"
                     /db_xref="CDD:441227"
ORIGIN      
        1 mytpdlsplg dsllwsapag tlplltifvt pgwlrwkahw aglsalgval lmavlvwgmp
       61 vdlallaatr gaafglfpim wivlcaiwly eltvrsgrfd dlrhlinvis ddpriqsdhh
      121 rlllrrpagg prglqgrpsr spa
//
LOCUS       WP_257955698             143 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Nocardioides
            sp. B-3].
ACCESSION   WP_257955698
VERSION     WP_257955698.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 143)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..143
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=15607
     Region          6..>84
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 msndqkvlvs gsagfiggyv veellsrgyt vvgidnysky gkveksydsh pnyhfheddc
       61 rnvdvmkkll adcdhfiaga aliggisyfh ayaydllaqn eadhglavrr rdrgvparqa
      121 eeghlplqld glrvlralal qgg
//
LOCUS       WP_257955710             306 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Nocardioides sp. B-3].
ACCESSION   WP_257955710
VERSION     WP_257955710.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 306)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 306)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 306)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..306
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=32866
     Region          <2..306
                     /region_name="sulfur_SfnB"
                     /note="sulfur acquisition oxidoreductase, SfnB family;
                     TIGR04022"
                     /db_xref="CDD:274924"
ORIGIN      
        1 myvnamreqg tpaqqefffg evlagkrfgn aqseigtkhv rdirttlqps evegsylltg
       61 tkgyatgalf adwipvlahl dvdgplhvar vertaegvtv iddwdgmgqr ttasgtvelv
      121 dvrvtadrit prhltfdrpq tygafaqllh saldvgiara aieeaaefvr tksrpfpdag
      181 vdragddplv vhalgqmeva vrgaeallre aaravdvana dltaetagaa spavaasras
      241 staasvdvts rlfevagtrs alrglnldrh wrnarthtlh dpaawkvqhl grwvvdrtlp
      301 pnhgql
//
LOCUS       WP_257955711              68 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Nocardioides sp. B-3].
ACCESSION   WP_257955711
VERSION     WP_257955711.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 68)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 68)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02771.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..68
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=6952
     Region          17..>68
                     /region_name="sulfur_SfnB"
                     /note="sulfur acquisition oxidoreductase, SfnB family;
                     TIGR04022"
                     /db_xref="CDD:274924"
ORIGIN      
        1 mtapahapvv sptwtsedav svartlaahf aegasrrdae rilpgaeldr laesgllait
       61 vpqeyggp
//
LOCUS       WP_257955742             366 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Nocardioides sp. B-3].
ACCESSION   WP_257955742
VERSION     WP_257955742.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024698.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13302.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..366
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=39612
     Region          2..152
                     /region_name="SugarP_isomerase"
                     /note="Sugar Phosphate Isomerase family; includes type A
                     ribose 5-phosphate isomerase (RPI_A),
                     glucosamine-6-phosphate (GlcN6P) deaminase, and
                     6-phosphogluconolactonase (6PGL). RPI catalyzes the
                     reversible conversion of ribose-5-phosphate to
                     ribulose...; cl00339"
                     /db_xref="CDD:469729"
     Region          182..322
                     /region_name="RimL"
                     /note="Protein N-acetyltransferase, RimJ/RimL family
                     [Translation, ribosomal structure and biogenesis,
                     Posttranslational modification, protein turnover,
                     chaperones]; COG1670"
                     /db_xref="CDD:441276"
ORIGIN      
        1 mgsqrlydrl dhnddfdfrp ieqvrvglwq qttlvsvtra fridltgrvc vdalggslyg
       61 glgaqpdfhr aaahspggra ivalasrqpd gssaftvrlg aaeavavprh etrwvvtefg
      121 itylhghslr eravaliela hpddreslla davaaglvpa gqklrsrrpy pseeereidl
      181 rngarvpvrp tqttdaarmq dlfyrmrped vrtrffrnlt sltrdaaehl csvgydrema
      241 lvavigsren eqivgsaqyy ldvstgladv symvdsqwqg qglgaalhrl lsdyasrhgv
      301 rgftadvlae nggmfkilts ggdatvhpad gvhelvipvr plpmpegags rpstpagpsp
      361 sasagr
//
LOCUS       WP_257955762             245 aa            linear   BCT 02-MAR-2025
DEFINITION  matrixin family metalloprotease [Nocardioides sp. B-3].
ACCESSION   WP_257955762
VERSION     WP_257955762.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 245)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
REFERENCE   2  (residues 1 to 245)
  AUTHORS   Gooley,P.R., O'Connell,J.F., Marcy,A.I., Cuca,G.C., Salowe,S.P.,
            Bush,B.L., Hermes,J.D., Esser,C.K., Hagmann,W.K., Springer,J.P. et
            al.
  TITLE     The NMR structure of the inhibited catalytic domain of human
            stromelysin-1
  JOURNAL   Nat Struct Biol 1 (2), 111-118 (1994)
   PUBMED   7656014
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00413.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..245
                     /product="matrixin family metalloprotease"
                     /EC_number="3.4.24.-"
                     /GO_component="GO:0031012 - extracellular matrix [Evidence
                     IEA]"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=25583
     Region          <179..239
                     /region_name="ZnMc"
                     /note="Zinc-dependent metalloprotease. This super-family
                     of metalloproteases contains two major branches, the
                     astacin-like proteases and the adamalysin/reprolysin-like
                     proteases. Both branches have wide phylogenetic
                     distribution, and contain sub-families, which...; cl00064"
                     /db_xref="CDD:469599"
     Site            order(200..201,204,210)
                     /site_type="active"
                     /db_xref="CDD:239806"
ORIGIN      
        1 mrglsfntai sivvtavivt mvvlflpssp mesvrrtlgl gserglparp vedpggifaf
       61 amtqpgsaep vgwdpcrpvr crvnpangpd ggadliarav ervsaatglt fedegatder
      121 pfraqfvplg tdrpvvigwg spaefpelag diagigggaa eegvlgrryy vtgavaldtd
      181 vfttleiarr pqtmeaivlh elahvvgldh vneptelman tnngqidfgp gdreglarvg
      241 alpca
//
LOCUS       WP_257955768             235 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6359 domain-containing protein [Nocardioides sp. B-3].
ACCESSION   WP_257955768
VERSION     WP_257955768.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039416.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19886.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..235
                     /product="DUF6359 domain-containing protein"
                     /calculated_mol_wt=24717
     Region          42..144
                     /region_name="DUF6359"
                     /note="Domain of unknown function (DUF6359); pfam19886"
                     /db_xref="CDD:437718"
ORIGIN      
        1 mlpgmnrhlg tgravalavi salivvlapa appalaatpl tvtraisqqn gstqtvrgyv
       61 vgqptatntv vkssfpsdya laiadsasqs stsqmlyvqi psayrsawgl ktnpglmgkq
      121 idvtgalasy fshpgmtgts afafsgggte ppppggtspw dstyyapaig ksgtalrtsl
      181 hdiidahtkl sydrvwtalk dtdqgpeqhg erhralhrpl dleeqqrrqp rsvep
//
LOCUS       WP_257955770              86 aa            linear   BCT 02-MAR-2025
DEFINITION  endonuclease [Nocardioides sp. B-3].
ACCESSION   WP_257955770
VERSION     WP_257955770.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 86)
  AUTHORS   Jekel,M. and Wackernagel,W.
  TITLE     The periplasmic endonuclease I of Escherichia coli has amino-acid
            sequence homology to the extracellular DNases of Vibrio cholerae
            and Aeromonas hydrophila
  JOURNAL   Gene 154 (1), 55-59 (1995)
   PUBMED   7867949
REFERENCE   2  (residues 1 to 86)
  AUTHORS   Nakamura,A., Koide,Y., Miyazaki,H., Kitamura,A., Masaki,H.,
            Beppu,T. and Uozumi,T.
  TITLE     Gene cloning and characterization of a novel extracellular
            ribonuclease of Bacillus subtilis
  JOURNAL   Eur J Biochem 209 (1), 121-127 (1992)
   PUBMED   1396690
REFERENCE   3  (residues 1 to 86)
  AUTHORS   Focareta,T. and Manning,P.A.
  TITLE     Extracellular proteins of Vibrio cholerae: molecular cloning,
            nucleotide sequence and characterization of the deoxyribonuclease
            (DNase) together with its periplasmic localization in Escherichia
            coli K-12
  JOURNAL   Gene 53 (1), 31-40 (1987)
   PUBMED   3036665
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016146.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04231.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..86
                     /product="endonuclease"
                     /GO_function="GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /calculated_mol_wt=9674
     Region          <2..86
                     /region_name="EndA"
                     /note="Endonuclease I [Replication, recombination and
                     repair]; COG2356"
                     /db_xref="CDD:441923"
ORIGIN      
        1 mkgdvarmll ymairyeggd gfnnlemsst vgtsstligd levllarnse dpvstfemrr
       61 ndrihstwqg nrnpfidhpe wadaiw
//
LOCUS       WP_257955804             614 aa            linear   BCT 02-MAR-2025
DEFINITION  type I restriction enzyme subunit R domain-containing protein
            [Nocardioides sp. B-3].
ACCESSION   WP_257955804
VERSION     WP_257955804.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 614)
  AUTHORS   Lapkouski,M., Panjikar,S., Janscak,P., Smatanova,I.K., Carey,J.,
            Ettrich,R. and Csefalvay,E.
  TITLE     Structure of the motor subunit of type I restriction-modification
            complex EcoR124I
  JOURNAL   Nat Struct Mol Biol 16 (1), 94-95 (2009)
   PUBMED   19079266
REFERENCE   2  (residues 1 to 614)
  AUTHORS   Roberts,R.J., Belfort,M., Bestor,T., Bhagwat,A.S., Bickle,T.A.,
            Bitinaite,J., Blumenthal,R.M., Degtyarev,S.Kh., Dryden,D.T.,
            Dybvig,K., Firman,K., Gromova,E.S., Gumport,R.I., Halford,S.E.,
            Hattman,S., Heitman,J., Hornby,D.P., Janulaitis,A., Jeltsch,A.,
            Josephsen,J., Kiss,A., Klaenhammer,T.R., Kobayashi,I., Kong,H.,
            Kruger,D.H., Lacks,S., Marinus,M.G., Miyahara,M., Morgan,R.D.,
            Murray,N.E., Nagaraja,V., Piekarowicz,A., Pingoud,A., Raleigh,E.,
            Rao,D.N., Reich,N., Repin,V.E., Selker,E.U., Shaw,P.C., Stein,D.C.,
            Stoddard,B.L., Szybalski,W., Trautner,T.A., Van Etten,J.L.,
            Vitor,J.M., Wilson,G.G. and Xu,S.Y.
  TITLE     A nomenclature for restriction enzymes, DNA methyltransferases,
            homing endonucleases and their genes
  JOURNAL   Nucleic Acids Res 31 (7), 1805-1812 (2003)
   PUBMED   12654995
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046890.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22679.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..614
                     /product="type I restriction enzyme subunit R
                     domain-containing protein"
                     /calculated_mol_wt=68140
     Region          <2..610
                     /region_name="COG0610"
                     /note="Type I site-specific restriction-modification
                     system, R (restriction) subunit and related helicases ...
                     [Defense mechanisms]"
                     /db_xref="CDD:440375"
ORIGIN      
        1 mtgtavkqgd rdtfrlfgdp ddpnfimsry tpersiadgy tkpivveark vgfdldrddl
       61 dkafddladd edpddetkef lsgkashtet ilsnpdrmta vcedmvahyl snvfplgqka
      121 qvvafnqrlv vayaetlqri lsergavmti kggdgsetak plevavvmsv piskdtpkny
      181 lkyaltddqe ealkrrfknv sdpltfvvvt akwmvgfnap iegvlyldkp lkaanlfqti
      241 trpnrprknp ltgqrkvfgr vvdyiglakq iglavagpkv ddeddeptpi dvidinqltv
      301 kfltdltgvq svfagidkte adfhslteae aripegtptg dkfiadfval qgvweflyan
      361 ntqnpmldpy kgdyrwlakv fdyisptdks qailwekyga ktlalvhghm dnitvapgrt
      421 vrldaaglel vkriaeqlal pdpnqdpknp gdvykdvvds iearlkrrle gtntavyksl
      481 adrieklrqr aistvddsia fledclnvar dvvaadraae qhpcvddtnl ydpktgalsa
      541 ivtentpegl hkivpdfvht vdsivvdvay tgwaknekgd ravkreirss lkkyglpvtg
      601 dlfdrvyayv rqny
//
LOCUS       WP_257955805             453 aa            linear   BCT 02-MAR-2025
DEFINITION  type I restriction endonuclease [Nocardioides sp. B-3].
ACCESSION   WP_257955805
VERSION     WP_257955805.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 453)
  AUTHORS   Piekarowicz,A., Klyz,A., Kwiatek,A. and Stein,D.C.
  TITLE     Analysis of type I restriction modification systems in the
            Neisseriaceae: genetic organization and properties of the gene
            products
  JOURNAL   Mol Microbiol 41 (5), 1199-1210 (2001)
   PUBMED   11555298
REFERENCE   2  (residues 1 to 453)
  AUTHORS   Makovets,S., Doronina,V.A. and Murray,N.E.
  TITLE     Regulation of endonuclease activity by proteolysis prevents
            breakage of unmodified bacterial chromosomes by type I restriction
            enzymes
  JOURNAL   Proc Natl Acad Sci U S A 96 (17), 9757-9762 (1999)
   PUBMED   10449767
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016220.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04313.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..453
                     /product="type I restriction endonuclease"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=49871
     Region          1..>408
                     /region_name="COG0610"
                     /note="Type I site-specific restriction-modification
                     system, R (restriction) subunit and related helicases ...
                     [Defense mechanisms]"
                     /db_xref="CDD:440375"
ORIGIN      
        1 mnesntiraa lvgwaedggw ehiagsllpr lpeltdvvvd gwareallsl npdlvgdpen
       61 tdavlaevsr avllaqdglv aanekltvml rgehafktlv gkhvprrfid fedlennrfv
      121 vsdevtikgg pdtrrmdvvy yvngfplvva etkspvdkgk swvngakdiw gtyeveyphf
      181 fapnvfsvat dgrqlrlapv rtepsgdvne degwgpwgst tddlkqtqae rvarsvelll
      241 tpatvlgmlh dyamyragss mepavkvlpr yaqleaaeai hakvrtgkrv gkgggliwqh
      301 qgsgktelga fassrllrdp avgnptvili ahrkqlvrqa aelfettgmp rvsvpaskrd
      361 lwkavknhrg vivttvhkfa eaghlsdrdn iivivdeahd sqegdfgegv arrcsqrhvl
      421 rddryrcqar rpghvqavrg prrsqlhhvp lhp
//
LOCUS       WP_257955964              67 aa            linear   BCT 02-MAR-2025
DEFINITION  acetylxylan esterase [Nocardioides sp. B-3].
ACCESSION   WP_257955964
VERSION     WP_257955964.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 67)
  AUTHORS   Degrassi,G., Kojic,M., Ljubijankic,G. and Venturi,V.
  TITLE     The acetyl xylan esterase of Bacillus pumilus belongs to a family
            of esterases with broad substrate specificity
  JOURNAL   Microbiology (Reading) 146 (Pt 7), 1585-1591 (2000)
   PUBMED   10878123
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017280.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05448.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..67
                     /product="acetylxylan esterase"
                     /calculated_mol_wt=7345
     Region          <2..65
                     /region_name="Axe1"
                     /note="Cephalosporin-C deacetylase or related acetyl
                     esterase [Secondary metabolites biosynthesis, transport
                     and catabolism]; COG3458"
                     /db_xref="CDD:442681"
ORIGIN      
        1 maaradvpal fsvalmddvc ppstvyaayn hyagpkeiev ytyneheggg vardeltiaw
       61 lrerfra
//
LOCUS       WP_257955973             151 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Nocardioides sp. B-3].
ACCESSION   WP_257955973
VERSION     WP_257955973.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..151
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=15870
     Region          <8..143
                     /region_name="Sbp"
                     /note="ABC-type sulfate transport system, periplasmic
                     component [Inorganic ion transport and metabolism];
                     COG1613"
                     /db_xref="CDD:441221"
ORIGIN      
        1 mpagtspaay ghalevndgd ekaardylvd fftnavalpg sardaltsft sgvgdvlisy
       61 eneaiparqn gqeldyivpd etllietpaa vtvdaepeaq sfldylytde aqasflkygy
      121 rpvvdgvtge vdgandpadp fpdaqgavhg r
//
LOCUS       WP_257956019             288 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Nocardioides
            sp. B-3].
ACCESSION   WP_257956019
VERSION     WP_257956019.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 288)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..288
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=31050
     Region          3..265
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(47,72,100,104)
                     /site_type="active"
                     /db_xref="CDD:187551"
ORIGIN      
        1 msfvradirs pviakvlake dvdtvvhmsv iatpgtaggr ntmkelnvmg tmqlpaacqk
       61 sptlqslvvk stttmygass rdpamfteem gpkrvpgsgy akdvyevegy vrgfarrrpd
      121 vnvttiraan vigphvvspi tsyfrlpvvp rvlgfdprlq flheddlldv lrhaavsdvp
      181 gtfnvagdgm lmlsqairrl nkstvslppf algrlgsvlr rarvadfspe qlgfltygrg
      241 vdttrmrevl gfeprfttas afadfgvslg vplsdntlvp apkgearv
//
LOCUS       WP_257956058             139 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase [Nocardioides sp. B-3].
ACCESSION   WP_257956058
VERSION     WP_257956058.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 139)
  AUTHORS   Hayashi,H., De Bellis,L., Yamaguchi,K., Kato,A., Hayashi,M. and
            Nishimura,M.
  TITLE     Molecular characterization of a glyoxysomal long chain acyl-CoA
            oxidase that is synthesized as a precursor of higher molecular mass
            in pumpkin
  JOURNAL   J Biol Chem 273 (14), 8301-8307 (1998)
   PUBMED   9525937
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013883.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01756.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..139
                     /product="acyl-CoA dehydrogenase"
                     /GO_component="GO:0005777 - peroxisome [Evidence IEA]"
                     /GO_function="GO:0003997 - acyl-CoA oxidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006635 - fatty acid beta-oxidation
                     [Evidence IEA]"
                     /calculated_mol_wt=15605
     Region          <3..134
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
ORIGIN      
        1 mlrfreehml ggvarrlkrg idngmnpgev fsrvrdhvig aarahvermv ldafilkira
       61 lpdgdqkval nllcdlhalt tiesdrawfi ehgrlstars kaisreindl crklrplavd
      121 pvdafgvpee mlrsreils
//
LOCUS       WP_257956068             135 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Nocardioides sp. B-3].
ACCESSION   WP_257956068
VERSION     WP_257956068.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..135
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=14067
     Region          <2..134
                     /region_name="PRK07814"
                     /note="SDR family oxidoreductase"
                     /db_xref="CDD:181131"
ORIGIN      
        1 mphllqgdge ksvvtvssml grtagrgyva ygtakaalah wtrltaadla prirvngvfv
       61 gsimtsaldp vvelpelreq metrtplgri gepadiaaav lylaspasay vtgkmlevdg
      121 girapnldlg lpdle
//
LOCUS       WP_257955793             395 aa            linear   BCT 02-MAR-2025
DEFINITION  type II restriction endonuclease [Nocardioides sp. B-3].
ACCESSION   WP_257955793
VERSION     WP_257955793.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 395)
  AUTHORS   Zhou,X.E., Wang,Y., Reuter,M., Mucke,M., Kruger,D.H., Meehan,E.J.
            and Chen,L.
  TITLE     Crystal structure of type IIE restriction endonuclease EcoRII
            reveals an autoinhibition mechanism by a novel effector-binding
            fold
  JOURNAL   J Mol Biol 335 (1), 307-319 (2004)
   PUBMED   14659759
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020588.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09019.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..395
                     /product="type II restriction endonuclease"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0009036 - type II site-specific
                     deoxyribonuclease activity [Evidence IEA]"
                     /GO_process="GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /calculated_mol_wt=44151
     Region          228..391
                     /region_name="EcoRII-C"
                     /note="EcoRII C terminal; pfam09019"
                     /db_xref="CDD:401096"
ORIGIN      
        1 migssldayf daaagkllsa vevdmsrsnq helngvgllv dlfghpgsdi lrfptrflyv
       61 tddlevtsve giltwydara nhatgtecrl yypanpvmam aqegdfliva rpsdmrdgvv
      121 vlvapagstv aiqlqtlfgl eaterldies tlddrpldft arhllealgy etaqiqnsrl
      181 eemlrrfggt fpvtstfsdf aretaladgr edpdeallvw mdqeeslyrt lerhlvgisl
      241 aeaagdvdev laismrtfqr rrsraghale nhvgrvldlh cvtyerrart egakkpdfli
      301 pgrvayldps fpdeglrmlg vkttckdrwr qvlteadrvh rkhlltleap israqtdemf
      361 grqlmlvvps qlhhlfepar vdnilsvanf ielvr
//
LOCUS       WP_257956192              80 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding domain-containing protein [Nocardioides sp. B-3].
ACCESSION   WP_257956192
VERSION     WP_257956192.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 80)
  AUTHORS   Williams,A., Guthlein,C., Beresford,N., Bottger,E.C., Springer,B.
            and Davis,E.O.
  TITLE     UvrD2 is essential in Mycobacterium tuberculosis, but its helicase
            activity is not required
  JOURNAL   J Bacteriol 193 (17), 4487-4494 (2011)
   PUBMED   21725019
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13538.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..80
                     /product="ATP-binding domain-containing protein"
                     /calculated_mol_wt=8552
     Region          <1..63
                     /region_name="recD"
                     /note="exodeoxyribonuclease V, alpha subunit; TIGR01447"
                     /db_xref="CDD:273631"
ORIGIN      
        1 mtihksrgsr advvtvllpd eesrlltrel fytavtrart kvrvigpesa lraaigrraq
       61 rasglrarpa dgntgatppd
//
LOCUS       WP_257956335             461 aa            linear   BCT 02-MAR-2025
DEFINITION  protein kinase domain-containing protein [Nocardioides sp. B-3].
ACCESSION   WP_257956335
VERSION     WP_257956335.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 461)
  AUTHORS   Hunter,T. and Plowman,G.D.
  TITLE     The protein kinases of budding yeast: six score and more
  JOURNAL   Trends Biochem Sci 22 (1), 18-22 (1997)
   PUBMED   9020587
REFERENCE   2  (residues 1 to 461)
  AUTHORS   Hanks,S.K. and Hunter,T.
  TITLE     Protein kinases 6. The eukaryotic protein kinase superfamily:
            kinase (catalytic) domain structure and classification
  JOURNAL   FASEB J 9 (8), 576-596 (1995)
   PUBMED   7768349
REFERENCE   3  (residues 1 to 461)
  AUTHORS   Hanks,S.K. and Quinn,A.M.
  TITLE     Protein kinase catalytic domain sequence database: identification
            of conserved features of primary structure and classification of
            family members
  JOURNAL   Methods Enzymol 200, 38-62 (1991)
   PUBMED   1956325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00069.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..461
                     /product="protein kinase domain-containing protein"
                     /GO_function="GO:0004672 - protein kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006468 - protein phosphorylation
                     [Evidence IEA]"
                     /calculated_mol_wt=47678
     Region          2..>410
                     /region_name="PknB_PASTA_kin"
                     /note="Stk1 family PASTA domain-containing Ser/Thr kinase;
                     NF033483"
                     /db_xref="CDD:468045"
     Region          347..400
                     /region_name="PASTA domain"
                     /note="PASTA domain [structural motif]"
                     /db_xref="CDD:275384"
ORIGIN      
        1 mavkllkaey addatfrrrf eseaqhaasl hhpgiagvfd fgeaaaldgs gtprpylvme
       61 lvegqplsal lrpdapldae vtrdlmaqaa salgaahaag ivhrdvkpgn livtpdrrik
      121 vtdfgiaraa dglaitetgq vmgtpaylsp eqaeggrata asdvyspacv afecpagrra
      181 ftgdtavata vahlrqpvpt lpssvpadla avvtralakd psaryadgsa fgaalrdpss
      241 aaaaaplpvp spvaepapet rvlpattatp vqpaaapaqr rtnpamwfvl gavlvaaali
      301 iwqimsssge addptvqpsp sqnrsqtesp sptteptetg ievdeddyvg reigevqsal
      361 kdlglkvsre kldnpgdeve gtvagvnpsg tlvngdrvtv sywgkapkev ptetptetpt
      421 etptetptet ptetatptet ptetpteapi ettsptevat q
//
LOCUS       WP_257956362             180 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Nocardioides sp. B-3].
ACCESSION   WP_257956362
VERSION     WP_257956362.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 180)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 180)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..180
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=19675
     Region          <2..165
                     /region_name="PRK09265"
                     /note="aminotransferase AlaT; Validated"
                     /db_xref="CDD:181738"
ORIGIN      
        1 miinpnnptg avysedivkg lidiarrhql vvfadeiyek ilfedaqhhh aatfagndvl
       61 cltfsglska yrvcgyragw lmisgpkeia tdflegltli anmrmcanvp aqhaiqtalg
      121 gyqsveefig pggrfyeqsm ladrllneip gvsnvtpkga lycfpawtrr strsmttsss
//
LOCUS       WP_257956369             270 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6049 family protein [Nocardioides sp. B-3].
ACCESSION   WP_257956369
VERSION     WP_257956369.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039636.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19516.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..270
                     /product="DUF6049 family protein"
                     /calculated_mol_wt=28123
     Region          9..>158
                     /region_name="DUF6049"
                     /note="Family of unknown function (DUF6049); pfam19516"
                     /db_xref="CDD:437348"
ORIGIN      
        1 mqhlspslra rrtrgrilvl avvialcalm gtanaeprka rparatadpl lvhldtispa
       61 tlsdedepvt itgtvanvsd eqwteinlya irsaapivdt palaasagta aagefvgerv
      121 itpgteatvd vlepgqtadf sltvprselg lsvsgvywlg vqasgltatl pkdtfadgra
      181 lhlhpagath pqegprdggr rdrpagprdg vvhprrpdrp gqalgplarr grpaghdprg
      241 grhrddrhdg vpagrpgrag grraagrgqp
//
LOCUS       WP_257956398             183 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Nocardioides sp. B-3].
ACCESSION   WP_257956398
VERSION     WP_257956398.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012312.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00083.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..183
                     /product="MFS transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=18845
     Region          <1..135
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mvagvalcva vigsailsdr igrrvvlmag tivgpvagpv afailepgdp gsfvvamivl
       61 mlaigipygp aaaylpelfr akyrytgagm aynlagivgg alplaiadpl lerwgtdgla
      121 yfvtglavvs tscllalret rgdvldadpg pagrrgdlna aqrgrligaa rwrwhhsgah
      181 hih
//
LOCUS       WP_257956406             150 aa            linear   BCT 02-MAR-2025
DEFINITION  iron transporter [Nocardioides sp. B-3].
ACCESSION   WP_257956406
VERSION     WP_257956406.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022101.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10634.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..150
                     /product="iron transporter"
                     /calculated_mol_wt=16399
     Region          <47..>118
                     /region_name="YfaS"
                     /note="Uncharacterized conserved protein YfaS,
                     alpha-2-macroglobulin family [General function prediction
                     only]; COG2373"
                     /db_xref="CDD:441940"
ORIGIN      
        1 myetveaeia erggeqtsge wrvgyiveaa epwfeehggh ssfreprage thhieiipfe
       61 estgrivpdv pvtvevvaad gtvvaeeeln fyyatffhya tnfsipedgt ytlratlgsp
      121 sflrhgdead gpalaeettv efadvelsas
//
LOCUS       WP_257956457             103 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-dependent oxidoreductase [Nocardioides sp. B-3].
ACCESSION   WP_257956457
VERSION     WP_257956457.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 103)
  AUTHORS   van Der Ploeg,J.R., Iwanicka-Nowicka,R., Bykowski,T.,
            Hryniewicz,M.M. and Leisinger,T.
  TITLE     The Escherichia coli ssuEADCB gene cluster is required for the
            utilization of sulfur from aliphatic sulfonates and is regulated by
            the transcriptional activator Cbl
  JOURNAL   J Biol Chem 274 (41), 29358-29365 (1999)
   PUBMED   10506196
REFERENCE   2  (residues 1 to 103)
  AUTHORS   Kertesz,M.A., Schmidt-Larbig,K. and Wuest,T.
  TITLE     A novel reduced flavin mononucleotide-dependent methanesulfonate
            sulfonatase encoded by the sulfur-regulated msu operon of
            Pseudomonas aeruginosa
  JOURNAL   J Bacteriol 181 (5), 1464-1473 (1999)
   PUBMED   10049377
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015325.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03358.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..103
                     /product="NAD(P)H-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=10543
     Region          5..>103
                     /region_name="FMN_red"
                     /note="NADPH-dependent FMN reductase; cl00438"
                     /db_xref="CDD:469770"
ORIGIN      
        1 mtrkivvlta gltvpsstrl lgdqladata aavgargeav sfeyvevrel ardlagymts
       61 ggvatprlta vreqisaadg liavtpvfsa sfsglfkmli dal
//
LOCUS       WP_257956089             254 aa            linear   BCT 02-MAR-2025
DEFINITION  sodium/proton-translocating pyrophosphatase [Nocardioides sp. B-3].
ACCESSION   WP_257956089
VERSION     WP_257956089.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 254)
  AUTHORS   Drozdowicz,Y.M. and Rea,P.A.
  TITLE     Vacuolar H(+) pyrophosphatases: from the evolutionary backwaters
            into the mainstream
  JOURNAL   Trends Plant Sci 6 (5), 206-211 (2001)
   PUBMED   11335173
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015019.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03030.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..254
                     /product="sodium/proton-translocating pyrophosphatase"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA]"
                     /GO_function="GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA]"
                     /GO_process="GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=25841
     Region          <25..201
                     /region_name="OVP1"
                     /note="Na+ or H+-translocating membrane pyrophosphatase
                     [Energy production and conversion]; COG3808"
                     /db_xref="CDD:443021"
ORIGIN      
        1 mpwsrptrrr tsscsstsst rpsrvgvllg acvvflfsgp ainavaraag avvyevrrqf
       61 reipgimegt grpeygkvvd ivtkdslrel vtpgipavla piavgfglga talagflaga
      121 igtgtlmavf panaggardn akklvedghh ggkgslahea tiigdtvgdp fkdtagpain
      181 plikvmnlvs lliasavvsm svgddqndal riiiavvava iiaaaiyvsk qrevsisddg
      241 dntgssamap hatt
//
LOCUS       WP_257956502              97 aa            linear   BCT 02-MAR-2025
DEFINITION  CoA transferase [Nocardioides sp. B-3].
ACCESSION   WP_257956502
VERSION     WP_257956502.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 97)
  AUTHORS   Heider,J.
  TITLE     A new family of CoA-transferases
  JOURNAL   FEBS Lett 509 (3), 345-349 (2001)
   PUBMED   11749953
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014564.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02515.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..97
                     /product="CoA transferase"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=10480
     Region          <2..>97
                     /region_name="CaiB"
                     /note="Crotonobetainyl-CoA:carnitine CoA-transferase CaiB
                     and related acyl-CoA transferases [Lipid transport and
                     metabolism]; COG1804"
                     /db_xref="CDD:441409"
ORIGIN      
        1 mdaaivdgta hlnamastlt algvasdrrv sglldggtpy ydiyetadgq hmsvgalepq
       61 fydelvrrle ldlpdrndlt nlpairealt arfkekt
//
LOCUS       WP_257956507             301 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-binding protein [Nocardioides sp. B-3].
ACCESSION   WP_257956507
VERSION     WP_257956507.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13460.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..301
                     /product="NAD(P)H-binding protein"
                     /calculated_mol_wt=32134
     Region          4..291
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(8,10..11,13,32..34,68..70,103..105,116,120,139..142)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187556"
     Site            order(81,105,116,120)
                     /site_type="active"
                     /db_xref="CDD:187556"
ORIGIN      
        1 mstvlvtgat gfvgrrlvpa ltdaghevra mtrspedyeg vgdpvgadvd dpgspavalt
       61 dvdvavylvh slddpdferk daraarnfsr aaadagvrqi vylgglgvdg ddlsphlrsr
      121 revegllgtd gvpvtvlraa ivvghggisr eitrqlvknl pamvvpkwvh trsqpigidd
      181 vvrylagvve heealgrvfe iggpeqltyl emmqvasevs ggrrlpivtv pvltprlssy
      241 wlalvtdvda ttgrnlidsm stevvvtdts ihdpvpgepm tyaecvrral adrkksaedr
      301 g
//
LOCUS       WP_257956539             152 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Nocardioides sp. B-3].
ACCESSION   WP_257956539
VERSION     WP_257956539.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..152
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=17067
     Region          <3..113
                     /region_name="GlxA"
                     /note="Transcriptional regulator GlxA, contains an amidase
                     domain and an AraC-type DNA-binding HTH domain
                     [Transcription]; COG4977"
                     /db_xref="CDD:444002"
ORIGIN      
        1 melspqedvn rrmlrardem drryaepldv ptlaaiahls asqfgrvfke vygetphryl
       61 qrrrveramt llrqtdrpvt dvawdvgfas lgtfsrtfst ivgcspsefr vrhepvhvpt
      121 cfiaartgpr esappfpgqt avsekrtdps ap
//
LOCUS       WP_257956545             387 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1295 domain-containing protein [Nocardioides sp. B-3].
ACCESSION   WP_257956545
VERSION     WP_257956545.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018649.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06966.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..387
                     /product="DUF1295 domain-containing protein"
                     /calculated_mol_wt=42270
     Region          <1..137
                     /region_name="CMAS"
                     /note="Mycolic acid cyclopropane synthetase; cl47167"
                     /db_xref="CDD:481507"
     Region          161..374
                     /region_name="COG3752"
                     /note="Steroid 5-alpha reductase family enzyme [General
                     function prediction only]"
                     /db_xref="CDD:442966"
ORIGIN      
        1 mgehvgeany ptyvevlrra vkpggrvlvq qmsrsgrkgg khpgggpfie sfiapdmhmr
       61 pvgetiahpe hgglevrdvh glrehyvqtv agwlerfean lprltelvge evvrvwrlyl
      121 vggsmafrdg rmgvdqilmv rpgavhtlpa krasvravfv vagidllicl vamgltawvs
      181 rrvgrvsvvd varglafvav glalavfsgh wlswllaglv avwggrlalh iqrrsrghge
      241 dpryaamlgd agfgtvirkv flvrgpavfl vslplmtaav yavrwpwlvv agvalwlvgl
      301 vfeavgdaql aayrklpkdv kpqvmqtglw rwtrhpnyfg dacvwwgiwl agalstgwlp
      361 glltiiapva mtyfrpsppe hafssar
//
LOCUS       WP_257956554             158 aa            linear   BCT 02-MAR-2025
DEFINITION  enoyl-CoA hydratase-related protein [Nocardioides sp. B-3].
ACCESSION   WP_257956554
VERSION     WP_257956554.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012596.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00378.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..158
                     /product="enoyl-CoA hydratase-related protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=16604
     Region          1..>132
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     Site            order(23,25,57,61..65,101,103..105,127..128,131)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(63,105)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
ORIGIN      
        1 melvhysvad avatitldsp hnrnalsrql vtelfahltt aaaddsvkvv liasagrvfc
       61 sgadlseata dgmeegarri velqrlivsm dkpvvvrayg avraggigiv aaadivvane
      121 satfaltevk lgpgrgdhqp drappdepar rrshdarr
//
LOCUS       WP_257956639             179 aa            linear   BCT 02-MAR-2025
DEFINITION  toxin-antitoxin system HicB family antitoxin [Nocardioides sp.
            B-3].
ACCESSION   WP_257956639
VERSION     WP_257956639.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 179)
  AUTHORS   Mhlanga-Mutangadura,T., Morlin,G., Smith,A.L., Eisenstark,A. and
            Golomb,M.
  TITLE     Evolution of the major pilus gene cluster of Haemophilus influenzae
  JOURNAL   J Bacteriol 180 (17), 4693-4703 (1998)
   PUBMED   9721313
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017355.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05534.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..179
                     /product="toxin-antitoxin system HicB family antitoxin"
                     /calculated_mol_wt=18898
ORIGIN      
        1 mditpyidsl rrdlmaaaea ggdevrqaae rltyaldpsa rlalmeaisr aaaeitaelp
       61 dggvdvrlng reldfvvdia pspvaaptpp pppappappd eeegparvtl ripesvkara
      121 eekaaaaghs lntwlvnvvr aatndhavsv dldlsslpff ggqdpfsktr gsrrmtgwq
//
LOCUS       WP_257956642             126 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Nocardioides sp. B-3].
ACCESSION   WP_257956642
VERSION     WP_257956642.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020897.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09339.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..126
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=13361
     Region          2..>77
                     /region_name="IclR"
                     /note="DNA-binding transcriptional regulator, IclR family
                     [Transcription]; COG1414"
                     /db_xref="CDD:441024"
ORIGIN      
        1 mshvpaatrt lrvlrfpasq pdpvaldris racdlprsta yhlvnamiae gfvvhleder
       61 rygpgvaafe vgtgfarpgt pathraptpr rpgstrrgta dtgraprarr plrdrgarag
      121 ssaagd
//
LOCUS       WP_257956703             206 aa            linear   BCT 02-MAR-2025
DEFINITION  LLM class flavin-dependent oxidoreductase [Nocardioides sp. B-3].
ACCESSION   WP_257956703
VERSION     WP_257956703.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012517.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00296.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..206
                     /product="LLM class flavin-dependent oxidoreductase"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /calculated_mol_wt=22923
     Region          26..>189
                     /region_name="Flavin_utilizing_monoxygenases"
                     /note="Flavin-utilizing monoxygenases; cl19096"
                     /db_xref="CDD:450250"
ORIGIN      
        1 mrftyaeamt darlyaplar aaeaagytsm tvadsliypk esdssypytd tgdrefledk
       61 efietmvlca hlfavtstlr ltpfvlklpv rppvlvakqa sslaflsdnr lglgvglspr
      121 pedfvtlgvp werrgkrmde cmdvlrglts gdffgydgef ykfpalkqtp apsapiplpg
      181 rraqrrgaap rrtqgrrlda rrrrrg
//
LOCUS       WP_257956745             106 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6230 family protein [Nocardioides sp. B-3].
ACCESSION   WP_257956745
VERSION     WP_257956745.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 106)
  AUTHORS   Feng,Z., Ogasawara,Y., Nomura,S. and Dairi,T.
  TITLE     Biosynthetic Gene Cluster of a d-Tryptophan-Containing Lasso
            Peptide, MS-271
  JOURNAL   Chembiochem 19 (19), 2045-2048 (2018)
   PUBMED   29974638
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039694.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19741.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..106
                     /product="DUF6230 family protein"
                     /calculated_mol_wt=11088
     Region          8..>82
                     /region_name="DUF6230"
                     /note="Family of unknown function (DUF6230); pfam19741"
                     /db_xref="CDD:466168"
ORIGIN      
        1 mavnittsdq hfkvysnyvq gvygaaftap nngtgptdni gvteigfkna klaglclitt
       61 qelgpigtts viitggvpvk asfdhsapgr hgckrrsdra rrqrsp
//
LOCUS       WP_257956770             195 aa            linear   BCT 02-MAR-2025
DEFINITION  tripartite tricarboxylate transporter substrate-binding protein
            [Nocardioides sp. B-3].
ACCESSION   WP_257956770
VERSION     WP_257956770.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 195)
  AUTHORS   Winnen,B., Hvorup,R.N. and Saier,M.H. Jr.
  TITLE     The tripartite tricarboxylate transporter (TTT) family
  JOURNAL   Res Microbiol 154 (7), 457-465 (2003)
   PUBMED   14499931
REFERENCE   2  (residues 1 to 195)
  AUTHORS   Antoine,R., Jacob-Dubuisson,F., Drobecq,H., Willery,E., Lesjean,S.
            and Locht,C.
  TITLE     Overrepresentation of a gene family encoding extracytoplasmic
            solute receptors in Bordetella
  JOURNAL   J Bacteriol 185 (4), 1470-1474 (2003)
   PUBMED   12562821
REFERENCE   3  (residues 1 to 195)
  AUTHORS   Sweet,G.D., Kay,C.M. and Kay,W.W.
  TITLE     Tricarboxylate-binding proteins of Salmonella typhimurium.
            Purification, crystallization, and physical properties
  JOURNAL   J Biol Chem 259 (3), 1586-1592 (1984)
   PUBMED   6141166
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015366.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03401.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..195
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /calculated_mol_wt=20329
     Region          <1..182
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mlvaskgsgf tsvddfanad gkitygttgv gtgaqlacal tfnvnetpae aipfdggapa
       61 ltallgdrvd taclqvgeai eniesgkivp lsvfgperva flpdvptake qgldvevsqy
      121 rfmtvpkgtp qdvkdaisea mqatfeteay ktfntnnnlt pmeipgeevv aqleadtery
      181 aapvaeygid lgdas
//
LOCUS       WP_257956788             329 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Nocardioides sp. B-3].
ACCESSION   WP_257956788
VERSION     WP_257956788.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 329)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 329)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..329
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=35362
     Region          3..323
                     /region_name="PRK07777"
                     /note="putative succinyldiaminopimelate transaminase DapC"
                     /db_xref="CDD:236095"
ORIGIN      
        1 mrpasasprc araiarhqrr hygieldpdr evvvttgate giaaallgli dpgdevvvle
       61 pyydsylami emcgavrrpv tlrapsfrld vealhgaigp raraillnsp hnptgtvlti
      121 eelqavavla iehdlivitd evyehlvfdg hqhiplatlp gmwertltls sagksysftg
      181 wkvgwatgps alvsavlaak qwltftsgsp lqpavahald eepgfpaela rslqsrrdll
      241 vaglsaagld arvpegtyfa ttdishpgws dgrefclalp eragvvaipn rafyddrdag
      301 rhlvrwafck epdlisagva llasvdlsr
//
LOCUS       WP_257956825             452 aa            linear   BCT 02-MAR-2025
DEFINITION  M28 family peptidase [Nocardioides sp. B-3].
ACCESSION   WP_257956825
VERSION     WP_257956825.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016289.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04389.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..452
                     /product="M28 family peptidase"
                     /calculated_mol_wt=47452
     Region          88..197
                     /region_name="PA"
                     /note="Protease-associated (PA) domain. The PA domain is
                     an insert domain in a diverse fraction of proteases. The
                     significance of the PA domain to many of the proteins in
                     which it is inserted is undetermined. It may be a
                     protein-protein interaction domain. At...; cl28883"
                     /db_xref="CDD:333703"
     Site            order(171..172,174)
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239045"
     Region          210..401
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mstsaalraa vtpegvmahp delraiaddn dgtrasgtpg yaaskdyvvs klkaagyspt
       61 vrafdfpfyr qletatfdvt aptaasyvdg tdfalmtysg sgdatgtvra vdlnpggtst
      121 sgceaadftg ftsgniapvr rgscafaikv vnardagasa vivmntnpga pafggtlgsp
      181 vgtvpslgts yaigssladg gtahivaste seirqtrnvh adtktgeret tvhagahlds
      241 vvagpgindn gsgsaallev aeqiattktp nrirfswwga eelgllgsnh yindlaankp
      301 smlkktalyl nfdmvgspny alfvydgdns afpvgpgaaq gpegsgaiek lfhdyfgsqd
      361 lpsaetpfsg rsdygpfiak gipagglftg aegvktpsqg ravrrrrrrl lrlllprclr
      421 hdrqrqrrrd rlqlrrdgar rahlrqlpql aq
//
LOCUS       WP_257956843             310 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Nocardioides sp. B-3].
ACCESSION   WP_257956843
VERSION     WP_257956843.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024257.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12849.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..310
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=33098
     Region          30..>237
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mlallpgllt gadafadddl pspaqraaya qiegsgstws evivqqwisd vdalgmkvty
       61 ngggssrgrk nfaqnvtdfg iseipypgvd efgnadnsng refaylpiva ggtaftyqlk
      121 ignelvrnlr lsgetltrif tgqitdwsdp aiakdnngra fpklaitpvv rsdgsgttaq
      181 fttrmdseyp siwqpyfgra gltsyyprkg rmiaqsgsdr vmntisgfsg nghigyvrvr
      241 lpdqqglpgr qgaqqgrvlr radavqrggr adegadqpgq elpalphpgs sractapptr
      301 aptrcrptat
//
LOCUS       WP_257956905             219 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Nocardioides sp. B-3].
ACCESSION   WP_257956905
VERSION     WP_257956905.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13407.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..219
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=23927
     Region          <2..213
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mvfdrgvqtd cattyihpig gyawgidtan flvdnleegd kvvalrilpg vdvletrwaa
       61 akkifeengi eaddfftgad pteikkiitd alnrgdvdgv wmdagdgava aieafedagv
      121 dypvmtgede msflrkweet gltglapvys nfqwrtplla vekifageev paewvlpqtp
      181 itedersdyl aandgmpdgh yakfggeelp gfpdartdr
//
LOCUS       WP_257956870             172 aa            linear   BCT 02-MAR-2025
DEFINITION  TIM barrel protein [Nocardioides sp. B-3].
ACCESSION   WP_257956870
VERSION     WP_257956870.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Fry,J., Wood,M. and Poole,P.S.
  TITLE     Investigation of myo-inositol catabolism in Rhizobium leguminosarum
            bv. viciae and its effect on nodulation competitiveness
  JOURNAL   Mol Plant Microbe Interact 14 (8), 1016-1025 (2001)
   PUBMED   11497462
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013429.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01261.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..172
                     /product="TIM barrel protein"
                     /calculated_mol_wt=17637
     Region          <3..164
                     /region_name="Hyi"
                     /note="Hydroxypyruvate/dehydroerythronate isomerase,
                     Hyi/OtnI family [Carbohydrate transport and metabolism];
                     cl46782"
                     /db_xref="CDD:481122"
ORIGIN      
        1 mgealgctaf nalygnrveg vsateqddvg aenlaiaara aariggtvlv epvsgaehyp
       61 lltaadaltv idragepnig lladlyhlsv ngddvdrvia dhlariahvq iadapgrnep
      121 gtgdlplmgq laaleaggyt gwvgpeykps ttsadsfgwl prerctstav an
//
LOCUS       WP_257957045             156 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Nocardioides sp.
            B-3].
ACCESSION   WP_257957045
VERSION     WP_257957045.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..156
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=16912
     Region          <1..152
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 marppfdtel lsskvvlrep lmavvptdhp lassdraltp qdfegqpvig ydpqqsryfh
       61 elsvrflana hprieqrvhr vltamllvaa drglalapas asslavpgvv fktlvhgggd
      121 taldadperp velyavwsre svspvvrrvl dvmltv
//
LOCUS       WP_257957058             110 aa            linear   BCT 02-MAR-2025
DEFINITION  GDP-mannose 4,6-dehydratase [Nocardioides sp. B-3].
ACCESSION   WP_257957058
VERSION     WP_257957058.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027681.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16363.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..110
                     /product="GDP-mannose 4,6-dehydratase"
                     /EC_number="4.2.1.47"
                     /calculated_mol_wt=11903
     Region          <2..110
                     /region_name="GalE"
                     /note="UDP-glucose 4-epimerase [Cell
                     wall/membrane/envelope biogenesis]; COG1087"
                     /db_xref="CDD:440704"
ORIGIN      
        1 mrdyihvldl aaghvaaleh lssseggara rnlgtgrgts vlemiaafer aagkeipytv
       61 mprragdlte tygdptraea elgwkatrsi ddmvtdlwrw qsqnpegfsa
//
LOCUS       WP_257957062             166 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Nocardioides sp. B-3].
ACCESSION   WP_257957062
VERSION     WP_257957062.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13343.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..166
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=17138
     Region          <2..115
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Region          <69..165
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 maaianggsa ddisagvdff gelkkagnfl pvdpdsgtie sgatpvvidw dypgaaaaan
       61 vstrktvvpe eavvagyyfq ainadaphpa aarlwqefly sdegqnlwle ggarpvrgda
      121 maeagtidad lwgalpevsg tpviptdpqt tkageylasn wskvis
//
LOCUS       WP_257956939             300 aa            linear   BCT 02-MAR-2025
DEFINITION  MCE family protein [Nocardioides sp. B-3].
ACCESSION   WP_257956939
VERSION     WP_257956939.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 300)
  AUTHORS   Mohn,W.W., van der Geize,R., Stewart,G.R., Okamoto,S., Liu,J.,
            Dijkhuizen,L. and Eltis,L.D.
  TITLE     The actinobacterial mce4 locus encodes a steroid transporter
  JOURNAL   J Biol Chem 283 (51), 35368-35374 (2008)
   PUBMED   18955493
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023315.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11887.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..300
                     /product="MCE family protein"
                     /calculated_mol_wt=32320
     Region          <3..166
                     /region_name="Mtu_fam_mce"
                     /note="virulence factor Mce family protein; TIGR00996"
                     /db_xref="CDD:273384"
ORIGIN      
        1 mevdrtrtpi qtdtlltnls ntvrsvdekd lqtvttefga afggagedlq tiidsgnefl
       61 eaaddnfeit tklikdsnvv lrgqiasess lrsfardlsv fstsmvasdk dlravidngs
      121 atanqlrrfp ednevdlasl innlvttgev vvsrldgveq llvlypyvve ggftvvsrta
      181 atgnfdahfg milteephvc hagyegtdrr spldgsnrpm nmsarcteaa sqsnargaqh
      241 apraaasygd piaafdpetg eltrgereae avqstgsvap rtlgkeswkw lflqplltqd
//
LOCUS       WP_257957090             130 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding protein [Nocardioides sp. B-3].
ACCESSION   WP_257957090
VERSION     WP_257957090.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 130)
  AUTHORS   Mittl,P.R. and Schulz,G.E.
  TITLE     Structure of glutathione reductase from Escherichia coli at 1.86 A
            resolution: comparison with the enzyme from human erythrocytes
  JOURNAL   Protein Sci 3 (5), 799-809 (1994)
   PUBMED   8061609
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013086.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00890.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..130
                     /product="FAD-binding protein"
                     /calculated_mol_wt=13718
     Region          1..>78
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mstpdaivvg agiaglvath elvragksvl vldpenrnnl ggrafwslgg lffvdspeqr
       61 rmgikdsrel aladwlgsag arpprgrgrr ghvgttlgrg vrrlrghrea rlpagpgaev
      121 aglrrlgraw
//
LOCUS       WP_257957007             327 aa            linear   BCT 02-MAR-2025
DEFINITION  LAGLIDADG family homing endonuclease [Nocardioides sp. B-3].
ACCESSION   WP_257957007
VERSION     WP_257957007.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 327)
  AUTHORS   Marcaida,M.J., Prieto,J., Redondo,P., Nadra,A.D., Alibes,A.,
            Serrano,L., Grizot,S., Duchateau,P., Paques,F., Blanco,F.J. and
            Montoya,G.
  TITLE     Crystal structure of I-DmoI in complex with its target DNA provides
            new insights into meganuclease engineering
  JOURNAL   Proc Natl Acad Sci U S A 105 (44), 16888-16893 (2008)
   PUBMED   18974222
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025881.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14528.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..327
                     /product="LAGLIDADG family homing endonuclease"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /calculated_mol_wt=36578
     Region          <2..>266
                     /region_name="PRK07773"
                     /note="replicative DNA helicase; Validated"
                     /db_xref="CDD:236093"
ORIGIN      
        1 mradtnaeit lgqlmesgak dipvwslddr lklvprtlth afpsgtkpvf eltltsgrri
       61 tatgnhkflt ydgwmplsel tpgsrlgavr hvppplevap rdedeivlla hmlgdgsfvk
      121 rqpiryvsid eanlasvgna aagrfgitpk rdeyaaarvt tlrlpapyhl thgkrnpiaa
      181 wldedglfgl rshekfvpdw vfglpkaqvg lfikhiwatd gsigydeknn lgrvyyasts
      241 rrlvddlarl llrynvftrd qaspqgrlpr rlsplrvrrr epapllrrdr rprgarcegg
      301 qpcrqvarrp rqhqprhraq gglgarp
//
LOCUS       WP_257957116             151 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein [Nocardioides sp. B-3].
ACCESSION   WP_257957116
VERSION     WP_257957116.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..151
                     /product="helicase-related protein"
                     /calculated_mol_wt=15831
     Region          <5..121
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
ORIGIN      
        1 mdearasftk rginfvsirg dqtakaraaa iesftndpet siivcsltaa gvglnlrvas
       61 nmvlaelswt daeqtraidr ihrigqsepv tarriiaaqt idskiaelid skaglaaral
      121 dgadeiassv dvqlealvgl ltdaleargg r
//
LOCUS       WP_257957134             156 aa            linear   BCT 02-MAR-2025
DEFINITION  enoyl-CoA hydratase-related protein [Nocardioides sp. B-3].
ACCESSION   WP_257957134
VERSION     WP_257957134.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012596.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00378.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..156
                     /product="enoyl-CoA hydratase-related protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=16666
     Region          <20..145
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
ORIGIN      
        1 mrwaaaassr srptsgsrpr trrsgqpevl lgiipgaggt qrparligps kakdliftgr
       61 fvkadealai gmvdrwsspm rctpqrwpgp dssraprarr sgrprpastg astatsrras
      121 eieqmqfaav fatedraigm rsfvesgpgk atfvsr
//
LOCUS       WP_257957137             205 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Nocardioides sp.
            B-3].
ACCESSION   WP_257957137
VERSION     WP_257957137.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 205)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..205
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=22188
     Region          11..195
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(16..17,19..20,23,27,29..35,127..132,138..139,
                     141..142)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176102"
ORIGIN      
        1 mrppslpahp ghwlvpalir syraerpdvr fdlrqhgdag lvedllggav dlaitgeqpd
       61 hpqvesrrll ieplrlvvsp dhrfagrrsv rladpagdpf ivlkrgfslr dvtqrlcgea
      121 gfapeigfeg eevetlrglv aaglgvallp dphgigapaa phlrvsdvpa sreigiarir
      181 drrlpaaseq frehalknar tvara
//
LOCUS       WP_257957159             167 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 15 protein [Nocardioides sp. B-3].
ACCESSION   WP_257957159
VERSION     WP_257957159.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012926.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00723.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..167
                     /product="glycoside hydrolase family 15 protein"
                     /calculated_mol_wt=18963
     Region          <1..155
                     /region_name="SGA1"
                     /note="Glucoamylase (glucan-1,4-alpha-glucosidase), GH15
                     family [Carbohydrate transport and metabolism]; COG3387"
                     /db_xref="CDD:442614"
ORIGIN      
        1 mrgdrrhfth srvmvwvafd rairavemhg lagpverwre lrelvraeip ekgydaergt
       61 ftqhydtrel daslltiplv gflpgdderv lgtiraieed lmhhgflrry rtetgvdgva
      121 gdehpfpacs fwlvsayaaa grrddahelm drlcaprerr rpavggv
//
LOCUS       WP_257957173             170 aa            linear   BCT 02-MAR-2025
DEFINITION  amino acid permease [Nocardioides sp. B-3].
ACCESSION   WP_257957173
VERSION     WP_257957173.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..170
                     /product="amino acid permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=18265
     Region          <1..148
                     /region_name="2A0306"
                     /note="amino acid transporter; TIGR00909"
                     /db_xref="CDD:129987"
ORIGIN      
        1 msagavaglt tvvmtlliga vrvffamsrd glmplalakv npttgtpvri tvaiglvvap
       61 vasltpigkl eemvnigtls afalvsiavp ilrkrrpdle rsfrvpfspw lpwlsaaicv
      121 flmlnltaet wlrfavwmgl gfliyftygy knsrvgrghg vpapdysvkd
//
LOCUS       WP_257957176             120 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Nocardioides sp. B-3].
ACCESSION   WP_257957176
VERSION     WP_257957176.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13751.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..120
                     /product="transposase"
                     /calculated_mol_wt=12786
     Region          <19..113
                     /region_name="transpos_IS1182"
                     /note="IS1182 family transposase; NF033551"
                     /db_xref="CDD:468080"
ORIGIN      
        1 mpatarwtts pppdptgssp partddsptr ppttrgpahh rptraplerm rhqmktpegl
       61 aayahrgata epvnahlkdq tglrrfsrrg laaatselnl aaavvnllkl hrhttaalat
//
LOCUS       WP_257957144             110 aa            linear   BCT 02-MAR-2025
DEFINITION  peroxide stress protein YaaA [Nocardioides sp. B-3].
ACCESSION   WP_257957144
VERSION     WP_257957144.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 110)
  AUTHORS   Liu,Y., Bauer,S.C. and Imlay,J.A.
  TITLE     The YaaA protein of the Escherichia coli OxyR regulon lessens
            hydrogen peroxide toxicity by diminishing the amount of
            intracellular unincorporated iron
  JOURNAL   J Bacteriol 193 (9), 2186-2196 (2011)
   PUBMED   21378183
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015820.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03883.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     gene            1..110
                     /gene="yaaA"
     Protein         1..110
                     /product="peroxide stress protein YaaA"
                     /calculated_mol_wt=11756
     Region          <6..110
                     /region_name="H2O2_YaaD"
                     /note="Peroxide stress protein YaaA; cl01143"
                     /db_xref="CDD:470094"
ORIGIN      
        1 mgaaveeaag tglpvdlrst myaafwrppa tspirvatvr vlhehngtrk vvshfnkatk
       61 grivrdlleh ganprtpqal atalgdlgwh vetgettprg tqldvvvrev
//
LOCUS       WP_257957189             199 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase [Nocardioides sp. B-3].
ACCESSION   WP_257957189
VERSION     WP_257957189.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 199)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..199
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=21879
     Region          <1..164
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
ORIGIN      
        1 mqavdraves lvetlrsvge lnntvivfss dngyspgehr fvgknvltee vmqvpllvrg
       61 pgidhgttse lpvtlvdlpa tftsladvqp gwqldglsft ptlrgrdqpf hdttlvqtgd
      121 dggdgwayrg vrttrylygv ngadgflydn lrdphelinr yddpgyleir alleqrrlql
      181 lscrgwtcng tfgllpdps
//
LOCUS       WP_257957146             129 aa            linear   BCT 02-MAR-2025
DEFINITION  3-methyl-2-oxobutanoate hydroxymethyltransferase [Nocardioides sp.
            B-3].
ACCESSION   WP_257957146
VERSION     WP_257957146.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 129)
  AUTHORS   Jones,C.E., Brook,J.M., Buck,D., Abell,C. and Smith,A.G.
  TITLE     Cloning and sequencing of the Escherichia coli panB gene, which
            encodes ketopantoate hydroxymethyltransferase, and overexpression
            of the enzyme
  JOURNAL   J Bacteriol 175 (7), 2125-2130 (1993)
   PUBMED   8096212
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014593.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02548.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..129
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /EC_number="2.1.2.11"
                     /GO_function="GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA]"
                     /GO_process="GO:0015940 - pantothenate biosynthetic
                     process [Evidence IEA]"
                     /calculated_mol_wt=13513
     Region          <1..128
                     /region_name="PanB"
                     /note="Ketopantoate hydroxymethyltransferase [Coenzyme
                     transport and metabolism]; COG0413"
                     /db_xref="CDD:440182"
ORIGIN      
        1 mahigftpqs ehtlggyrvr grgegsdrii adahavqdag afavvmemvp gdvaeriske
       61 ltiptigiga gngcdgrvlv wqdafglrtg rmakfvkqya dvhsvlldaa gayaddvrag
      121 tfpgaehtf
//
LOCUS       WP_257957263              79 aa            linear   BCT 02-MAR-2025
DEFINITION  type II secretion system F family protein [Nocardioides sp. B-3].
ACCESSION   WP_257957263
VERSION     WP_257957263.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides sp. B-3
  ORGANISM  Nocardioides sp. B-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 79)
  AUTHORS   Peabody,C.R., Chung,Y.J., Yen,M.R., Vidal-Ingigliardi,D.,
            Pugsley,A.P. and Saier,M.H.
  TITLE     Type II protein secretion and its relationship to bacterial type IV
            pili and archaeal flagella
  JOURNAL   Microbiology (Reading) 149 (Pt 11), 3051-3072 (2003)
   PUBMED   14600218
REFERENCE   2  (residues 1 to 79)
  AUTHORS   Py,B., Loiseau,L. and Barras,F.
  TITLE     An inner membrane platform in the type II secretion machinery of
            Gram-negative bacteria
  JOURNAL   EMBO Rep 2 (3), 244-248 (2001)
   PUBMED   11266368
REFERENCE   3  (residues 1 to 79)
  AUTHORS   Stathopoulos,C., Hendrixson,D.R., Thanassi,D.G., Hultgren,S.J., St
            Geme,J.W. 3rd and Curtiss,R. 3rd.
  TITLE     Secretion of virulence determinants by the general secretory
            pathway in gram-negative pathogens: an evolving story
  JOURNAL   Microbes Infect 2 (9), 1061-1072 (2000)
   PUBMED   10967286
REFERENCE   4  (residues 1 to 79)
  AUTHORS   Salmond,G.P. and Reeves,P.J.
  TITLE     Membrane traffic wardens and protein secretion in gram-negative
            bacteria
  JOURNAL   Trends Biochem Sci 18 (1), 7-12 (1993)
   PUBMED   8438237
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11449670
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Nocardioides sp. B-3"
                     /db_xref="taxon:2895565"
     Protein         1..79
                     /product="type II secretion system F family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /calculated_mol_wt=8790
     Region          <1..73
                     /region_name="TadC"
                     /note="Flp pilus assembly protein TadC [Extracellular
                     structures]; COG2064"
                     /db_xref="CDD:441667"
ORIGIN      
        1 mksfclamvq adslgipigr vlriqsremr vkrrqraeek aqqvpvrimi plvlfilpcl
       61 fivilgpagi qiaetfsdl
//
LOCUS       WP_257957420             672 aa            linear   BCT 02-MAR-2025
DEFINITION  FG-GAP-like repeat-containing protein [Parapedobacter tibetensis].
ACCESSION   WP_257957420
VERSION     WP_257957420.1
KEYWORDS    RefSeq.
SOURCE      Parapedobacter tibetensis
  ORGANISM  Parapedobacter tibetensis
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Parapedobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13517.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Parapedobacter tibetensis"
                     /db_xref="taxon:2972951"
     Protein         1..672
                     /product="FG-GAP-like repeat-containing protein"
                     /calculated_mol_wt=74327
     Region          53..287
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(58,93,173,207,209,252,279..280)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     Site            order(93,279)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:197306"
     Site            order(173,209,280)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197306"
     Region          314..376
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          368..430
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          422..484
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          584..646
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
ORIGIN      
        1 minmrlfsil ivslafagck seliqlptdn dalllnrnam lspqqadvan aikvmsfnir
       61 hhdandpqsl derkgiilqt itdnnpdivg lqefadnwfe twmqtqmtsa gydyymnesa
      121 gfgspkvify ksnrftrlde dtfqiqliqn rsgswvilld natnkeyfvc nshwstesss
      181 ervatanvvk dvveqhsqgl pvivfgdfna kpgtpeisii knikgsnnmv cthsesgptf
      241 hgwdatgtsk ldwifcsrdl ayinskvitt syngnwpsdh waitatfipa ifdgghydtn
      301 gisasantry yfadvtgdgv eekiywnpty dsghtrvyks ngngtftfln sntnggsesn
      361 sttfyfadvt gdgkadkiyw nptfdsghtr vyiangdgtf swsnsntngg sesaqttfyf
      421 advtgdgkad kiywnptfds grtrvyiang dgtfswsnsn tnggsesnst tfyfadvtgd
      481 gkadkiywnp tfdsghtrvy iangdgtfsw snsntnggse saqttfyftd vtgdgkadki
      541 ywnptfdsgh trvyiangdg tfswsnsntn ggsesaqttf yftdvtgdgk adkiywnpna
      601 ylgklklyrs kgdgtfddpi yslrgtsqss vtqfyfadin gdgkadqirw nreespgghd
      661 qgtlknyfsy qn
//
LOCUS       WP_257957458             921 aa            linear   BCT 02-MAR-2025
DEFINITION  outer membrane beta-barrel protein [Parapedobacter tibetensis].
ACCESSION   WP_257957458
VERSION     WP_257957458.1
KEYWORDS    RefSeq.
SOURCE      Parapedobacter tibetensis
  ORGANISM  Parapedobacter tibetensis
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Parapedobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026255.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14905.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Parapedobacter tibetensis"
                     /db_xref="taxon:2972951"
     Protein         1..921
                     /product="outer membrane beta-barrel protein"
                     /calculated_mol_wt=105203
     Region          44..134
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
     Region          457..910
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mrifqanssy sdeklpstal hklvlfvfvf vslqamgqhq rkeisgvvid tagvplegvn
       61 vrlssildti littkkngaf rftdiigpef rltfsmigyk ildksyqsnf stpliqllpi
      121 vlppeqtllr evvinwvqpi vikedtiqyn mdafnvrkns lleeslkllp nvqvlrdgtv
      181 iahgrqisrv qvdsknffgg evltatrnlp aefvqsiqvi dyygdmasrt gvkdtepeki
      241 lnivlkedkk rilfgqvtgg ggteeryigs mginnfndgq efsmvgsfnn tntslfsyga
      301 psgagmrerg ntdltgmmdp vdglnttnsa gvsysddise kvsvygkytf snrknntvgn
      361 tllrsvyddf ntienrqkke inadninhlm awdveaqlda rnylkvspnl systsnsmhr
      421 srdtienrhi iserayfade emsspnfdid vlysrmfrkp grkfvlnmqg kysktnkles
      481 indyfesvna ntgqpiqddv yaleqqvnsd nrnrvgrmra syvepidkns ilemsyeyny
      541 taidsrrsvw diteemfvds lsldysyffe snkvginyqm eqnkrfkyil gfavqplllq
      601 ghtldndeht qhsninlips agfrfrinde sewsidylgt nnqpnfsqiq pirdltnsqn
      661 iiignadlka efinrfttrf rqtkmgrnrf feaqlsinqi qnkivtnrsn pnstiqetsf
      721 rnspgyfdar gyfmystpvi ndkfllnlng ttdyvnnisy vndeknfgrn fiysqgaqvq
      781 faledilete lnssytfnrt ryslrktedi dansfligfa gkgylsdnwa fgfdlshrln
      841 tgyssfvnan ptllnayiec tflknnmall rlqgfdlfne ntgltlevld tdrfetrnnr
      901 laryfmlsln irlqkyppkk s
//
LOCUS       WP_257957480             395 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2062 domain-containing protein [Parapedobacter tibetensis].
ACCESSION   WP_257957480
VERSION     WP_257957480.1
KEYWORDS    RefSeq.
SOURCE      Parapedobacter tibetensis
  ORGANISM  Parapedobacter tibetensis
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Parapedobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021363.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09835.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Parapedobacter tibetensis"
                     /db_xref="taxon:2972951"
     Protein         1..395
                     /product="DUF2062 domain-containing protein"
                     /calculated_mol_wt=45104
     Region          14..188
                     /region_name="DPM_DPG-synthase_like"
                     /note="DPM_DPG-synthase_like is a member of the
                     Glycosyltransferase 2 superfamily; cd04179"
                     /db_xref="CDD:133022"
     Site            order(17,19,96)
                     /site_type="active"
                     /note="Ligand binding site [active]"
                     /db_xref="CDD:133022"
     Site            order(44,95..96)
                     /site_type="active"
                     /note="Putative Catalytic site [active]"
                     /db_xref="CDD:133022"
     Site            94..96
                     /site_type="active"
                     /note="DXD motif [active]"
                     /db_xref="CDD:133022"
     Region          239..393
                     /region_name="COG3216"
                     /note="Uncharacterized conserved protein, DUF2062 family
                     [Function unknown]"
                     /db_xref="CDD:442449"
ORIGIN      
        1 masnevlasi nacvviptfn naktlkrvld gvrtytssii vvndgstdet teilanypdl
       61 niihltgnkg kgyalrsgfn eaykrgfdya itidsdgqhf pddiprfvte ieekgealli
      121 garnmdqagv prkssfgnrf snfwfrfetg ialsdtqsgf rlyplkkiqd irfytnkfef
      181 evevivkaaw rgipirnipv rvlydpderv shfrpfrdft risilntwlv lvtlfyirpr
      241 dyfrtfkekg frrfffedll hsddpawkka ssvalgvlvg lsplwgfhmv ivlflafvlr
      301 lnkliafafs nvsippmipl iiytsfqiga fimgqpseas fqwwelgtyr tfiqqhltey
      361 ivgslvlavf aamvfgilsy lllnikasrk drrad
//
LOCUS       WP_257957559             401 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Parapedobacter tibetensis].
ACCESSION   WP_257957559
VERSION     WP_257957559.1
KEYWORDS    RefSeq.
SOURCE      Parapedobacter tibetensis
  ORGANISM  Parapedobacter tibetensis
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Parapedobacter.
REFERENCE   1  (residues 1 to 401)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Parapedobacter tibetensis"
                     /db_xref="taxon:2972951"
     Protein         1..401
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=45099
     Region          2..235
                     /region_name="GH43_Pc3Gal43A-like"
                     /note="Glycosyl hydrolase family 43 protein such as
                     Phanerochaete chrysosporium exo-beta-1,3-galactanase (Pc1,
                     3Gal43A, 1,3Gal43A); cd18821"
                     /db_xref="CDD:350142"
ORIGIN      
        1 mnrfigfscy ssadlanwkf erivlpeqrd gllgpnrvge rvkvmkcpts geyvmymhtd
       61 nrkysdphvg yatsktinge yefhgallyd gqpirkwdmg tfrdtdgqgy llihhgdiyr
      121 lskdyrsaek kvasfipgvg espamfmkdg lyyllssnlt swerndnkyh tapsvegpwe
      181 erglfcpegs ltynsqcsfv fplvrgndti plymgdrwsf pnqadaatqv wlplqtngtk
      241 lsipeywpyw danslepvaf pedvlvtlpp ntalasnrkg dlmripyngl pvgligesgp
      301 hggyarvsit gndgttfhts lvdfyskvpd tglrfvtppl pggdytlqve vsreqgvwfn
      361 krgdrygseg ywvrvhqlvv fphghagstr rhiapsdysq e
//
LOCUS       WP_257957569             579 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Parapedobacter tibetensis].
ACCESSION   WP_257957569
VERSION     WP_257957569.1
KEYWORDS    RefSeq.
SOURCE      Parapedobacter tibetensis
  ORGANISM  Parapedobacter tibetensis
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Parapedobacter.
REFERENCE   1  (residues 1 to 579)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Parapedobacter tibetensis"
                     /db_xref="taxon:2972951"
     Protein         1..579
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=65965
     Region          52..360
                     /region_name="GH43-like"
                     /note="Glycosyl hydrolase family 43 protein;
                     uncharacterized; cd08982"
                     /db_xref="CDD:350096"
     Region          355..476
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
     Region          493..570
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; smart00060"
                     /db_xref="CDD:214495"
     Site            order(493,553,568)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
ORIGIN      
        1 mekfklmkvv fsfmvivgla iphgfgqsll qstycnplnl dyayatrfds lsyrsgadpv
       61 avefrgeyyl fvtrsmgywh stdlqnwtfi rpekwyfegs naptahnykd svlyvtgnps
      121 gsmailytdn pkkgdwkavp svlnqlqdpd lfidddgqay mfwgssnkfp irakkldrtn
      181 rfipiskevh elfnldgeqh gwerfgenhs dtvlggyieg psmtkhkgky ylqyaapgte
      241 fnvygdgvyv sdaplgpyey apnnpfsykp ggfingaghg ntlmgpagqy whfttmavav
      301 hvgwerriga fptyfddddl mytntaygdy phyapnipgk mgeftgwmll sykkpvkass
      361 hvsdfgsehv tdeeiksfwv aehkddqqwi eidlekpgtv yaiqvnyndy qsdlygkpeg
      421 lyhryviegs edgaawrtlv nrqnnykdvp ndyveldrpe kvryvryrni hvptpnlsis
      481 glrifgigeg kkpssvknls iarqadrrda liqwdaqknv qgyhvfwgia pdklysswmv
      541 yddneleikg lsigqtyyfa veafnengis ertavkkae
//
LOCUS       WP_257957586             147 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6934 family protein [Parapedobacter tibetensis].
ACCESSION   WP_257957586
VERSION     WP_257957586.1
KEYWORDS    RefSeq.
SOURCE      Parapedobacter tibetensis
  ORGANISM  Parapedobacter tibetensis
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Parapedobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046175.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22028.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Parapedobacter tibetensis"
                     /db_xref="taxon:2972951"
     Protein         1..147
                     /product="DUF6934 family protein"
                     /calculated_mol_wt=17091
ORIGIN      
        1 mnedsysfek tpevytyefy segpqgrirk vvqyhlidpd syifnlgfgd wnperndvdd
       61 kkttnnqdrq kvlatvaktv vdfmnghpna kivaqgstpa rtrlyqmgia afwqevvehf
      121 eidgyinghw esfrpkrnye afllsrk
//
LOCUS       WP_257957641             327 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DnaT-like ssDNA-binding domain-containing protein
            [Klebsiella pneumoniae complex].
ACCESSION   WP_257957641
VERSION     WP_257957641.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae complex
  ORGANISM  Klebsiella pneumoniae complex
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (residues 1 to 327)
  AUTHORS   Fujiyama,S., Abe,Y., Tani,J., Urabe,M., Sato,K., Aramaki,T.,
            Katayama,T. and Ueda,T.
  TITLE     Structure and mechanism of the primosome protein DnaT-functional
            structures for homotrimerization, dissociation of ssDNA from the
            PriB.ssDNA complex, and formation of the DnaT.ssDNA complex
  JOURNAL   FEBS J 281 (23), 5356-5370 (2014)
   PUBMED   25265331
REFERENCE   2  (residues 1 to 327)
  AUTHORS   Liu,Z., Chen,P., Wang,X., Cai,G., Niu,L., Teng,M. and Li,X.
  TITLE     Crystal structure of DnaT84-153-dT10 ssDNA complex reveals a novel
            single-stranded DNA binding mode
  JOURNAL   Nucleic Acids Res 42 (14), 9470-9483 (2014)
   PUBMED   25053836
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037684.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17948.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Klebsiella pneumoniae complex"
                     /db_xref="taxon:3390273"
     Protein         1..327
                     /product="DnaT-like ssDNA-binding domain-containing
                     protein"
                     /calculated_mol_wt=36141
     Region          <157..250
                     /region_name="DnaT"
                     /note="DnaT DNA-binding domain; cl46275"
                     /db_xref="CDD:480615"
ORIGIN      
        1 marirtvkpe fwtdekvvec siparllfig lfnfandmgc lerspkrlkm qifpadvldc
       61 epliqelith gllteysvnd vcylqikgfl khqkinrpsa skiplppeft eskagkeekr
      121 apnqgglsed svnphggltd gkgregkgkg snptlyaqer nfpqqpqylp gvdipigkfa
      181 mhdlwlpsqd wprlaatwgi alpepaylpt elaeftaywk segkvftqiq weqkfarsvi
      241 sarakskpqp atggkdhagi qpvntasrav qeiqaarkrw ekqnglaggg ygmaamdshg
      301 gnifepvdpe erggalgyvd cpdwide
//
LOCUS       WP_257957644             115 aa            linear   BCT 02-MAR-2025
DEFINITION  HAD hydrolase-like protein [Enterococcus faecium].
ACCESSION   WP_257957644
VERSION     WP_257957644.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024811.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13419.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..115
                     /product="HAD hydrolase-like protein"
                     /calculated_mol_wt=13656
     Region          1..>56
                     /region_name="YcjU"
                     /note="Beta-phosphoglucomutase, HAD superfamily
                     [Carbohydrate transport and metabolism]; COG0637"
                     /db_xref="CDD:440402"
ORIGIN      
        1 mikalifdmd gvlidseimy qkwvfnflkq enlsyplysy qkkigttasi fddiekyneg
       61 cnslelkgkf tkywksqkid yldifpnili eqlewlkkek nkngncffqs ngyyk
//
LOCUS       WP_257957658             157 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Enterococcus faecium].
ACCESSION   WP_257957658
VERSION     WP_257957658.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Kreikemeyer,B., Beckert,S., Braun-Kiewnick,A. and Podbielski,A.
  TITLE     Group A streptococcal RofA-type global regulators exhibit a
            strain-specific genomic presence and regulation pattern
  JOURNAL   Microbiology (Reading) 148 (Pt 5), 1501-1511 (2002)
   PUBMED   11988525
REFERENCE   2  (residues 1 to 157)
  AUTHORS   McIver,K.S. and Myles,R.L.
  TITLE     Two DNA-binding domains of Mga are required for virulence gene
            activation in the group A streptococcus
  JOURNAL   Mol Microbiol 43 (6), 1591-1601 (2002)
   PUBMED   11952907
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016901.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05043.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..157
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=18512
     Region          16..>129
                     /region_name="PRK09863"
                     /note="putative frv operon regulatory protein;
                     Provisional"
                     /db_xref="CDD:182121"
     Region          87..151
                     /region_name="HTH_CRP"
                     /note="helix_turn_helix, cAMP Regulatory protein
                     C-terminus; DNA binding domain of prokaryotic regulatory
                     proteins belonging to the catabolite activator protein
                     family; cl46859"
                     /db_xref="CDD:481199"
ORIGIN      
        1 mknlqlkfiv dpsivrwfri inqfernqla tkgelaksnh vsertiqtdv nkmkdyfses
       61 vqfvstksgy sfqkerpvlf lkqkeqllen eilfellgnv fygeledmte lidrfhlsea
      121 tfrrylkqiq pvleeyglel slypldlkge eaysqvf
//
LOCUS       WP_257957828             321 aa            linear   BCT 02-MAR-2025
DEFINITION  conjugal transfer protein TraF [Pandoraea commovens].
ACCESSION   WP_257957828
VERSION     WP_257957828.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 321)
  AUTHORS   Arutyunov,D., Arenson,B., Manchak,J. and Frost,L.S.
  TITLE     F plasmid TraF and TraH are components of an outer membrane complex
            involved in conjugation
  JOURNAL   J Bacteriol 192 (6), 1730-1734 (2010)
   PUBMED   20081027
REFERENCE   2  (residues 1 to 321)
  AUTHORS   Wu,J.H., Kathir,P. and Ippen-Ihler,K.
  TITLE     The product of the F plasmid transfer operon gene, traF, is a
            periplasmic protein
  JOURNAL   J Bacteriol 170 (8), 3633-3639 (1988)
   PUBMED   3042757
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025105.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13728.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     gene            1..321
                     /gene="traF"
     Protein         1..321
                     /product="conjugal transfer protein TraF"
                     /calculated_mol_wt=35044
     Region          <65..276
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 mtallalvaa tvsfgavgqq ytsrgddygn afvnyqpyvv pgqpdaadek apapaptapk
       61 tesapkadgk qsvnveflrk aypmleerai dnptdenvsa ymyakrivmd kaqrfseavt
      121 rvlrkdpvld ennrvpyast galavrnany qaqqkavqem akagglvvfv dgtcrfcame
      181 ipvlerlkaa yglehvvisl dgakpngfkg kllpdnglfh klglkltpsi vyvprpqayt
      241 ghsdpnqylv vsqgfyaede ltkliafagh dtkllsadvm rdldvwdrgv atntdlkglk
      301 ldpnepgtfr evlqpyllkq y
//
LOCUS       WP_257957830            1064 aa            linear   BCT 02-MAR-2025
DEFINITION  conjugal transfer protein TraG N-terminal domain-containing protein
            [Pandoraea commovens].
ACCESSION   WP_257957830
VERSION     WP_257957830.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 1064)
  AUTHORS   Frost,L.S., Ippen-Ihler,K. and Skurray,R.A.
  TITLE     Analysis of the sequence and gene products of the transfer region
            of the F sex factor
  JOURNAL   Microbiol Rev 58 (2), 162-210 (1994)
   PUBMED   7915817
REFERENCE   2  (residues 1 to 1064)
  AUTHORS   Firth,N. and Skurray,R.
  TITLE     Characterization of the F plasmid bifunctional conjugation gene,
            traG
  JOURNAL   Mol Gen Genet 232 (1), 145-153 (1992)
   PUBMED   1348105
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07916.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..1064
                     /product="conjugal transfer protein TraG N-terminal
                     domain-containing protein"
                     /calculated_mol_wt=111053
     Region          17..507
                     /region_name="TraG_N"
                     /note="TraG-like protein, N-terminal region; pfam07916"
                     /db_xref="CDD:429732"
     Region          <878..>982
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
ORIGIN      
        1 maiptltyys vsadlttlsa vlngvamvck qnamiwgfav lvaiwrllst vttatlrsps
       61 gqgaatlatg plhalmplvl amlltnsmlq gtvqiqsrnt gavtkvdnvp laisiipaga
      121 sqlsmdlnev fatafqtvdm eyptisattn gflnplktll sartamvrls gidskvktvl
      181 sscfgpdsgt dyakvqdmvl ntgntgakaa qsiaingvnp tslgallyqa slnttglvnd
      241 vgmsdydflp cpdaaykvad ditnalnsle ftrvvqgavn gmdqklpnad ysfnsiaaqy
      301 naiatantlg gvfsggaaqa naefmnllfa emvqsdlncl rafgenlsqc qatalqaaei
      361 ernnlqnaas evpmlryags fgnqlialii glgpvilmlm mfagteagrc vktaahimvw
      421 pllvvnvgae lvnamqtiev anflqalrqg gwisqastfa aykelslqig vgshvmaslp
      481 vlmsiifglg qssmmtsvaa tiapksqntt dnvapapsat rpmfenssia qatqlangqa
      541 slkmngalda vsasstfgnq areatrsltk aqtqsesiea gqqnlrqwte aarsgnfesl
      601 gvdnatgqdi vknweirrna sqsqhagagv saakanensa gasmqvgfsa gagagpgagl
      661 psasisggvs gqaatnafdr lqrtddagrn msyddskals qaihdtissr qtsssgqqla
      721 kdlsqtlqtq etfqrtvsdv ksvsdatsna lhdsssfvqa saqikapeiv wqrsanpefg
      781 mfqvlqgraf eenpnaqkym rqaaddaarg vtntvvnspe gqqavnrhra avlmaqdgna
      841 svadraratq yladeaqamq hmrftpgdts mkdftvgspa drtgvdsqnl qnavqrgtpa
      901 lpvppvrpah apaasptapv gtapasqapl avaptggapa hrahvtrpqd srptgassep
      961 vmassprqtp pqphnlpeld pafkkmvetg lsdhqkevtd kvdsankhsv nadlgekgpg
     1021 tvrrsasnva qnlkdavgas sgpsrtsler ierpsgaape lppq
//
LOCUS       WP_257957837             463 aa            linear   BCT 02-MAR-2025
DEFINITION  conjugal transfer protein TraN [Pandoraea commovens].
ACCESSION   WP_257957837
VERSION     WP_257957837.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 463)
  AUTHORS   Frost,L.S., Leplae,R., Summers,A.O. and Toussaint,A.
  TITLE     Mobile genetic elements: the agents of open source evolution
  JOURNAL   Nat Rev Microbiol 3 (9), 722-732 (2005)
   PUBMED   16138100
REFERENCE   2  (residues 1 to 463)
  AUTHORS   Lawley,T.D., Klimke,W.A., Gubbins,M.J. and Frost,L.S.
  TITLE     F factor conjugation is a true type IV secretion system
  JOURNAL   FEMS Microbiol Lett 224 (1), 1-15 (2003)
   PUBMED   12855161
REFERENCE   3  (residues 1 to 463)
  AUTHORS   Maneewannakul,S., Kathir,P. and Ippen-Ihler,K.
  TITLE     Characterization of the F plasmid mating aggregation gene traN and
            of a new F transfer region locus trbE
  JOURNAL   J Mol Biol 225 (2), 299-311 (1992)
   PUBMED   1593622
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018666.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06986.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     gene            1..463
                     /gene="traN"
     Protein         1..463
                     /product="conjugal transfer protein TraN"
                     /calculated_mol_wt=48544
     Region          <69..447
                     /region_name="PRK12355"
                     /note="type-F conjugative transfer system mating-pair
                     stabilization protein TraN"
                     /db_xref="CDD:237072"
ORIGIN      
        1 mikhiisvla ilitlahant ataqtypsga ctqvpnsqkc idntpcktds tgqklclsta
       61 slplpdgals vpyacwqysy efactgtsvd tcapyransa cgvvtsicnd kiaetglcdq
      121 wtytyscltk paqteqqmqc tdglfdtsgf pkppnnnnsf vkgalgleil gqaqtytdgn
      181 sifkgveetc tkgymgiknc cksapggqtn saamgvamga aasvvkyaga kavdfaspyv
      241 fdtmfsngif sealaqnfti aagegattlg tnlaangfsv gafgftagfg tmtggvfgan
      301 iqlmsfqggy iafnpyvfaa avamqvimql mqctqdeqll alhkgaglst fikeecsqkv
      361 lgtcleytdt ycsfnsqlaq iiniqgktql glelagcggl tpteisaidf tkidfsafts
      421 qlqekavenm pvpsqisgsy qpimqqqgag tkqssssanl pky
//
LOCUS       WP_257957850              65 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6900 domain-containing protein [Pandoraea commovens].
ACCESSION   WP_257957850
VERSION     WP_257957850.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046126.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21841.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..65
                     /product="DUF6900 domain-containing protein"
                     /calculated_mol_wt=7045
ORIGIN      
        1 maqptisnaa rselthiaea tlgiptlesr hsdsldfhdl avwtierale qaylagmtdh
       61 qrsae
//
LOCUS       WP_257957883             234 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Pandoraea commovens].
ACCESSION   WP_257957883
VERSION     WP_257957883.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024375.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12973.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..234
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=25086
     Region          20..108
                     /region_name="Cupin_7"
                     /note="ChrR Cupin-like domain; pfam12973"
                     /db_xref="CDD:463764"
     Region          139..215
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 mrvnadfsqr avvtptqyvw vpspqagver vmldrigtek aratsivryd aasdfpahsh
       61 pggeeilvls gtfsadghdy pagwylrnpp gsshrpssrd gatifvklmq mpasqdtvvr
      121 idtsdaanwr tlpgqdvcpl fsdeqervvl irlaanaplr sprlitqpri vellvldgtl
      181 lvngdahaag swirlpaddi aslaagntgv tvyykayasp rplppasats paya
//
LOCUS       WP_257957876            1398 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system tape measure protein [Pandoraea
            commovens].
ACCESSION   WP_257957876
VERSION     WP_257957876.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 1398)
  AUTHORS   Jiang,F., Li,N., Wang,X., Cheng,J., Huang,Y., Yang,Y., Yang,J.,
            Cai,B., Wang,Y.P., Jin,Q. and Gao,N.
  TITLE     Cryo-EM Structure and Assembly of an Extracellular Contractile
            Injection System
  JOURNAL   Cell 177 (2), 370-383 (2019)
   PUBMED   30905475
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039901.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19268.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1398
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..1398
                     /product="contractile injection system tape measure
                     protein"
                     /calculated_mol_wt=150626
     Region          4..>292
                     /region_name="CIS_TMP"
                     /note="Contractile injection system tape measure protein;
                     pfam19268"
                     /db_xref="CDD:466019"
     Region          <312..838
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          <1112..1397
                     /region_name="CIS_TMP"
                     /note="Contractile injection system tape measure protein;
                     pfam19268"
                     /db_xref="CDD:466019"
ORIGIN      
        1 mdtrhrirsl dfdltfasgg mamsqgdplr alvvdqllpv vasvfdeatg dgaaadiyri
       61 drldvdlgev yaedlpetla erlaealasv lvmwrgegsa vdgaaehsga gegiggvgig
      121 sravgsghrg savgqrqpdg adasvqsqaa srphvskfat aatadatdlm aflasgqwvr
      181 pgsmpgsvqt epnhvlrrde gphrdtdaaa adgieallar vlagdvqtvr qriranassd
      241 tliqrltkqf padgvealir alrpaeasgw lrqlggldrl lesvgwnssq raeaqtaara
      301 rlltmgllpp gvdlrempwh gvwqavlsia svrglvhdel dfvakvreht radegragae
      361 daartgqvsq agsarspmid alhrvaeaka ngavreggma gflspdatps aihdarsggl
      421 phapvltsna sprsltrsgl kallatalmr aqakalygvw ptlvaneadt lrealrryls
      481 vsdlrehial tfpvsmledm ltllvavrld vtqgsargyg ketdatvvat ssqstghdvn
      541 rtwgwrnaws ndiaavlgiy dsdampaavg apadrsqast rggnrltdgd rrdddglpla
      601 ssdtsstgla hrsiggepts aepavppsva daqptsddfd phvqaksrrd tliqallsgs
      661 avalhddwae wtgaeraala siwrhyatyd tvlmrvvegf petmlvdlat vtvpsaaaiw
      721 eafaevsvgq lvdavqvsas sierppgdts rvldgflsla htggrethae pitrnvpsqt
      781 efdrwkrevw heifmrlrai apvtstssip svsfaaleav alsrgttawt rqaldlwrat
      841 vttatattts pgtvahsrrt anridtddsd rrrlesstad avppapvpvp mglhtatati
      901 qrliqfrqqv npqggdliar asslsdtqrl dlrqmvaeia stresalagi dahhwqaiid
      961 tmiavsvsip dahrevlyrs ildnapdidi daengvlpad atgryyasva talasdtvld
     1021 ldllaesaia raassspddl dlnalgpfpp tspnrppamp edfiayltst nfgqgrtppa
     1081 gfdiwlrqsv ysgayvlrpv iataaedeal aerwldlipq plwpgiarls srdtpqvaqm
     1141 lrvssditdl fattvetvap aslqrarwrf lfpwlflpqr rfdaatfais lvaqlarhan
     1201 vavppalasr vqqqtgidmr tadvtddahl lqtplmvpya gmvltwpftt hlwdklgltk
     1261 ehrfvsdeaa eravlllhyv gsglteapep hltmhkllcg lrfdtpvarh lditedesmm
     1321 ceqmldviiq ywsalgntsr dglrgsflqr egrlsleedg whlkvrrapy dmlldrlpws
     1381 iatirlswme qtlwvewa
//
LOCUS       WP_257957892             325 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Pandoraea
            commovens].
ACCESSION   WP_257957892
VERSION     WP_257957892.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 325)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..325
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=34891
     Region          1..305
                     /region_name="PRK11233"
                     /note="nitrogen assimilation transcriptional regulator;
                     Provisional"
                     /db_xref="CDD:183045"
ORIGIN      
        1 mdvrqlrnfv aivdsgslsk aaerlhiaqp slsaqlrgle delqtqllvr saqgvtptea
       61 gkalyrharv vlrqmeqirq evregggsea gpvavgfptt iasilavplf arvreqypgi
      121 rlqifesmsg yigellangr ldlamlfrds etrgisvmpl fdeelyvlgg hrvcpsiyed
      181 aednahgtca lgklgnvpiv apsasnglrl liersfaqan aelnivadid slptlidiar
      241 sgdacsilpv salasrdpal rppsrrivap hlqrpasvcw snslpvgsat vavrqciadl
      301 irelqadghw tgitlravdk daviv
//
LOCUS       WP_257957954             504 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Pandoraea commovens].
ACCESSION   WP_257957954
VERSION     WP_257957954.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 504)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 504)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 504)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 504)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..504
                     /product="ATP-binding protein"
                     /calculated_mol_wt=54128
     Region          29..>274
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
     Region          <169..493
                     /region_name="envZ"
                     /note="osmolarity sensor protein; Provisional; PRK09467"
                     /db_xref="CDD:236531"
ORIGIN      
        1 msdvsraqta pssyasrwar ygrylgwpst lsgrlalilv igmlatqlvt gtvwfdaryg
       61 rvaevpvrsg gariadavkl fdvvppaerg almqrlratg vevrnidapa aqqrmshfsd
      121 dlfdnvltsq lgpmhpfvah pvvlyddtge plalatllra haptahlaad vrlqdgqwms
      181 lavvagqagl dlrpgaafad yfvriylari faviliavia vrialrplar msaaadrlgr
      241 dihspplnen gpvevrraaq tfnamqhrli eamqartafl asvshdlrsp ltrlrlraet
      301 lgdpaqrerf rqdlmemeam iaasldhvrg vpsgealrdv dieallrava edaretggdv
      361 rvrdqsasgt vrgyprtlrr cvqnlvdnal ryaggcrvsa hlsaqgthle ivvedrgpgi
      421 peaelsaave pfvragvhrq vaeqghdgvp ggpdgaglgl aiartiaqah dgslilsnrp
      481 ggglraelhl pvagpdiale thtk
//
LOCUS       WP_257957960             227 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphatase PAP2 family protein [Pandoraea commovens].
ACCESSION   WP_257957960
VERSION     WP_257957960.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 227)
  AUTHORS   Neuwald,A.F.
  TITLE     An unexpected structural relationship between integral membrane
            phosphatases and soluble haloperoxidases
  JOURNAL   Protein Sci 6 (8), 1764-1767 (1997)
   PUBMED   9260289
REFERENCE   2  (residues 1 to 227)
  AUTHORS   Stukey,J. and Carman,G.M.
  TITLE     Identification of a novel phosphatase sequence motif
  JOURNAL   Protein Sci 6 (2), 469-472 (1997)
   PUBMED   9041652
REFERENCE   3  (residues 1 to 227)
  AUTHORS   Messerschmidt,A. and Wever,R.
  TITLE     X-ray structure of a vanadium-containing enzyme: chloroperoxidase
            from the fungus Curvularia inaequalis
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 392-396 (1996)
   PUBMED   8552646
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013718.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01569.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..227
                     /product="phosphatase PAP2 family protein"
                     /calculated_mol_wt=24131
     Region          3..148
                     /region_name="PAP2_like"
                     /note="PAP2_like proteins, a super-family of histidine
                     phosphatases and vanadium haloperoxidases, includes type 2
                     phosphatidic acid phosphatase or lipid phosphate
                     phosphatase (LPP), Glucose-6-phosphatase,
                     Phosphatidylglycerophosphatase B and bacterial acid...;
                     cl00474"
                     /db_xref="CDD:469784"
     Site            order(55,74..76,118,124,128)
                     /site_type="active"
                     /db_xref="CDD:238813"
ORIGIN      
        1 msnfwititd fgsaavtvpl aaalilwlls arawhaafaw ialfgagslv vavskvmflg
       61 wglgvreidf tgvsghtffa atvypviawl llsklpwpwr vlgtvvaaag svavgvsrva
      121 lsahsvsesi agcivgfsvc aafawytrgd dapnlktlpm aaslfvlmmw lhgesvptqr
      181 witdialims greqpfkrys wlarkpapaq aipvapalpt pspapvr
//
LOCUS       WP_257957965            1274 aa            linear   BCT 02-MAR-2025
DEFINITION  cellulose synthase subunit BcsC-related outer membrane protein
            [Pandoraea commovens].
ACCESSION   WP_257957965
VERSION     WP_257957965.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 1274)
  AUTHORS   Zogaj,X., Nimtz,M., Rohde,M., Bokranz,W. and Romling,U.
  TITLE     The multicellular morphotypes of Salmonella typhimurium and
            Escherichia coli produce cellulose as the second component of the
            extracellular matrix
  JOURNAL   Mol Microbiol 39 (6), 1452-1463 (2001)
   PUBMED   11260463
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017257.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05420.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1274
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..1274
                     /product="cellulose synthase subunit BcsC-related outer
                     membrane protein"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /GO_process="GO:0030244 - cellulose biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=140698
     Region          37..1270
                     /region_name="PRK11447"
                     /note="cellulose synthase subunit BcsC; Provisional"
                     /db_xref="CDD:183140"
     Region          280..308
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(315,318..319,322..323,325,359,362..363,366..367,
                     371..372,395,398..399,402..403,406)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          315..342
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          347..389
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          394..422
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(700,703..704,707..708,710,734,737..738,741..742,
                     744..745,768,771..772,775..776,779)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          700..727
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          732..762
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          767..795
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          836..864
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mtcllmaagg ghvraapapa nstakpavaa nrdvsnllss atlwhsrhrn dlaraaleka
       61 llvqpeqpdv lsllgqidie enkpadanka lqtlrarypn apatkaladv irintvdksr
      121 iararllqrs gqadaafaey kalfpdgppt gdlgveyyra qanatngwpa aqqglanlsk
      181 tspedsrasq slaelmidrp ssrlagtrmv adlaarpnad lnallplwqk glskadgnla
      241 wlplyqryla lapndadira aydklnaqqa artrmlndpa ykarqagina ldqgrlndae
      301 ksldaarvkr pndgellgsl glvkmrqgdh kgaqelfaqa mrkdpdnagk wrsllktsqf
      361 wgamsqarda rdagrldead rlvrgalasd pnnpdglall gdialedkrd kdaerlfqqa
      421 lkiepdndta lrgmitlysr qqrrtelanl lgdlrrrfpq dktrfdkaea aalsddadra
      481 iagghngpal aaleravald pgnawtrysl aslyrklrlp qigrevmaeg mrqpleaddr
      541 aqmlyaqaiy lnviddeaga reslaqipaa nvtpsikrmr ttlairdtar lareahatgn
      601 ddeserryge altmagddpe ligevararv sagqpdqgla lmrnwlaaha dkpqpdaqlr
      661 yaellstaer deelgtflas mdpstlgadq rdewqdlqdr lalrqadrar algdfdtaqq
      721 klepllsrqp pdkralstlg diyfderrfd darkiaedqi rqdptnqdar lslvrvlyeq
      781 qddeaanrel dralaeaspd dvwtqlaavr rltameryde aialndrlrt qfpdtsavtv
      841 qrgriaqsqr hyneakgwyd qarkeeivqg alpgydgmts aesaidsles rrnsyvaagy
      901 eidqkkgdgg ismfnaravp lygqyavgyd ghvfaqtdyv sadsgdlpln gtsafgtlpf
      961 lnvpsfraan pgvqsdygtk rqkahgqalm lgyendwira dightpvgfp isyvtggvrl
     1021 fgnlgrynyw vdasrrpmtg smvsyagayl plpevfgdgk wggvrrdait fhasrdftkw
     1081 gifgeasvar ltgenvlnns evsaragvdl pliykrdmrl ntgltlffds faqneryyty
     1141 ghggyyspqt yvsltlplew ygrtqrwsyy lrgsvsfsqs qekampyfpt ngalqaasgd
     1201 ltygsgggfg vgfsvtgrae ywvnrhwvig gqvqfersdy yapnrflvym ryhfdarrgd
     1261 vpmppspvrp iwsy
//
LOCUS       WP_257957992             698 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing
            protein [Pandoraea commovens].
ACCESSION   WP_257957992
VERSION     WP_257957992.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 698)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02737.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..698
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /GO_function="GO:0070403 - NAD+ binding [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=74109
     Region          5..696
                     /region_name="fadJ"
                     /note="fatty acid oxidation complex subunit alpha FadJ;
                     PRK11154"
                     /db_xref="CDD:236864"
ORIGIN      
        1 mstayevrdg vavitlenpp vnglghatra giaqgltqaq adaqvraivl igsgkafsgg
       61 adirefntpk atqspllvdv inaldactkp vvaavhavam ggglelalac hyrvalpgaq
      121 ialpevklgl lpgaggtqrl praigvaral dmvvtgrvvk setlvgtlfs dvfegnhddl
      181 lagaiafasd vadagnalpr lrdvaiedad gsaqsaidaa rdkvqreqph fpaphkcvaa
      241 veaalqrpfd egvkferecf valvsspesk alrhaflger aaakiadvpd dtpvrsierv
      301 avigagtmgg giamtfanag ipvtlvdtte aslargveam rsnyaravtr gklsadeaek
      361 rlarihgstd fvsvadadli veavfedmai kqvvfreldk iakpgailas ntstlnldal
      421 aettsraadv igmhffspan vmrllevvrg antgkdvlat vmklakrigk lavvarvcdg
      481 fignrmlepy fkqsqwmveq gatpaqvdaa ierfgfamgp frtsdlagnd vswairkrrh
      541 aeqpgivypk iadvlceagr ygqkthagwy dyaegdrtpr esakvaqmle dyrktngits
      601 rvfsdeeivd rlvyalvneg arvladgtaa rasdidmvyl ngygfplwrg gpmlyadtig
      661 ldkvlarvks fesgehgedw ipaarlaela eagkrfng
//
LOCUS       WP_257958002             571 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Pandoraea commovens].
ACCESSION   WP_257958002
VERSION     WP_257958002.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 571)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..571
                     /product="AMP-binding protein"
                     /calculated_mol_wt=62834
     Region          8..566
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(219,222..227,229..230)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341259"
     Site            order(222,341..342,363..368,452,464,467,478,558)
                     /site_type="other"
                     /note="putative AMP binding site [chemical binding]"
                     /db_xref="CDD:341259"
     Site            order(222,265..266,314,316..317,320,341..342,363..368,452,
                     464,467,475..478,538)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:341259"
     Site            order(265,316..317,320,341,475..477,532,538)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341259"
ORIGIN      
        1 mdqavqqerv wlsayppgvp adidvnryas lvqafdewie kyrdriafvs lgseitygev
       61 srqahafaaw lqargvkkge rvalmmpncf qypiclfgtl iagavvvnvn plytarelkh
      121 qlqdsgaqti vvfenfaktl eealpgtevr nilvtqigdl lqpganvkgr avnflmrhia
      181 kqvppyrlpq amalrqalas garlkatpvp lvredlaflq ytggttgvak gamlshgnvl
      241 anllqteawa adqldgdiev nlsllpmyhi lsltlnclvf mslggrnili anprdvkkvv
      301 yiirnetftg vtgvntlfng llenadfrar dfsklklsla ggmatqraia erwkqvtgkp
      361 iiegygltec spivtmnpvd iahmdavdfs gsiglpapst dvrfkrddgt wapigepgel
      421 cvrgpqvmrg ywnrpeetak tfdadgwlmt gdigvmdarg yvrlidrkkd milvsgfnvy
      481 pneiedvvml hpgvreaavv gvpdpvager vklvliakdp tltieaiaah crkhltaykv
      541 priiefrqge lpkstvgkil rrelrdpvsr r
//
LOCUS       WP_257958055             562 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Pandoraea commovens].
ACCESSION   WP_257958055
VERSION     WP_257958055.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 562)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..562
                     /product="AMP-binding protein"
                     /calculated_mol_wt=63148
     Region          67..540
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(199,202..207,209..210)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341278"
     Site            order(202,317..318,339..344,422,434,437,448,530)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341278"
     Site            order(202,242..243,292,294..295,298,317..318,339..344,422,
                     434,437,445..448,512)
                     /site_type="active"
                     /db_xref="CDD:341278"
     Site            order(242,294..295,298,317,445..447,506,512)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341278"
ORIGIN      
        1 mphtqgfgda rdlllaqrah ydvayrdfrw pvlthfnwal dffdpqaqgn dtpalwvvee
       61 dgrearlsfa emsarsnrva nflraqgvar gdrvllmlpn qvelwdlmla cmklgavmip
      121 attllvagdl adrlergrvr hvvttardav kfddlpgdyr riavgdhppd gwtsltpaye
      181 apeqftpdgv tlatdpllly ftsgttsrpk lvlhthqsyp vghlatmywi glqpgdvhwn
      241 isspgwakha wscffapwna gatifiynfs rfdaraalet aarcevttlc apptvwrmmi
      301 qedlarhpvk freligagep lnpevidqvr rawnitirdg ygqtetccqi gnspgqtvka
      361 gamgrpmpgy rvvlldpega eadegevalv lsprptglmq gyeddsekta yamrdgyyht
      421 gdvamrddrg yftyvgradd vfkasdyris pfeleselik hpavaeagvv pspdplrlav
      481 pkafitlrsg fqaddklald ilrfcrdhla pykrirrief cdlpktisgk irrvelrrte
      541 egrslearre mefwdidfad lk
//
LOCUS       WP_257958073             639 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Pandoraea commovens].
ACCESSION   WP_257958073
VERSION     WP_257958073.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..639
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=69475
     Region          15..>619
                     /region_name="PRK06814"
                     /note="acyl-[ACP]--phospholipid O-acyltransferase"
                     /db_xref="CDD:235865"
ORIGIN      
        1 mseasqrear gdghqsrllk errfapffwt qflgamndnv fkiaftslvt yhaslfqdvd
       61 gktaaflisa ifiapfllfs atsgqiadkw dkarlirfvk tleiaimvvg aagfvwtsap
      121 llyvctflmg lhstlfgpvk yaylpqhlan helvggnglv emgtfvailv gtiiggelag
      181 agagalpwig gvciglamlg rlvstwvpqt paaqpdlrin wnpftetwrn lsiarkdrav
      241 fqsllgiswl wflgatflas ffnfsrdvlg anpdvvtlll amfsvgigmg sllcerlsgg
      301 kveiglvpfg sigmtvfavd lyfasrggap ggalqtvgqf vsqpahwril adlfllamfg
      361 gfysvplyal iqsrsapshr ariiaannil nalfmvvsav mammltkagl tidqlylvtg
      421 ilnalvavyl ysllpeflir fvmwlmlhti yrievkgadq ipdegpcvlv cnhvsfadav
      481 vigasirrpv rfvmdhrifk ipvlswffrt vgaipiapah edaagleray aqiakaldag
      541 dvvcifpegk ltasgdlqvf rqgvqriier spvpvvpmal rglwgsffsr hggaamtrpf
      601 krgilnrlel vvgepvapaq atpeslrdkv lklrgpwpv
//
LOCUS       WP_257958077             174 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Pandoraea commovens].
ACCESSION   WP_257958077
VERSION     WP_257958077.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..174
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=19252
     Region          21..116
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(22..24,38,54..56)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133389"
ORIGIN      
        1 mpadlsstvp gattpddasl ltvgqaaaal gvtartlkyy eelnlvvpar sggryrmyts
       61 adletfgril rmrslgfsia aitemlkrpr rmveagksrm needlqvvrd altsqldtlr
      121 ertaqvrrel rdaetleaqi rhdlryieqr lqgvpaddll aeraatarkt ppsh
//
LOCUS       WP_257958101             153 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF559 domain-containing protein [Rothia mucilaginosa].
ACCESSION   WP_257958101
VERSION     WP_257958101.1
KEYWORDS    RefSeq.
SOURCE      Rothia mucilaginosa
  ORGANISM  Rothia mucilaginosa
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Rothia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016370.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04480.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Rothia mucilaginosa"
                     /db_xref="taxon:43675"
     Protein         1..153
                     /product="DUF559 domain-containing protein"
                     /calculated_mol_wt=17406
     Region          <73..153
                     /region_name="MTES_1575"
                     /note="REase_MTES_1575; cl46272"
                     /db_xref="CDD:480612"
ORIGIN      
        1 mtfreavvla dsimrrglme pheviealln ltgyggssgr tlaqavdass esagesltrc
       61 llmehrlplp vtqypisceg rnyrvdfawp earlilefdg eqkyvdhpgr dryeaardra
      121 laragwrivh ltwadifqke reviahlrrl lmr
//
LOCUS       WP_257958165             176 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Pandoraea commovens].
ACCESSION   WP_257958165
VERSION     WP_257958165.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..176
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=19719
     Region          33..157
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mnelifcprc asaldsreva grirracpda acgfvhwdnp lpvvaglvey rgqillarna
       61 awtegmfali tgflerdeth edgirreike etnleadais llgvyefmrk neliiayhav
      121 cdgdiqlsee laefrlvaph qvrpwragtg havaewlrrr nlpveyvesa rmsiag
//
LOCUS       WP_257958196             484 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein [Pandoraea commovens].
ACCESSION   WP_257958196
VERSION     WP_257958196.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 484)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..484
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=51419
     Region          9..482
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     Site            order(150..154,162,177,179..180,228..231,234,237..238,
                     251..253,285,385,387,413,452)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143415"
     Site            order(154,251,282,285)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143415"
ORIGIN      
        1 mttvptffny idgewcasqt grtfenrnpa dtrdvvgvfq asgeadataa vqaaasafga
       61 wkraapgvra kvllsaaayl erhaerfgde lareegkqks lakdeflras qtlryyaiea
      121 qsfggetfpn ddadmavytv replgvvtvi spwnfpvsip arkiapalic gntvvfkpat
      181 daplsglrlv eafveagipr gvlnfvtgsa savgpvlvga reiraisftg stsageqihr
      241 aasmstrtqm elggknaliv ldardidrav dltvkggfsl tgqactgtsr vlvareiraa
      301 fveklvartv alkigpglea gndigplate gqlrtvleyv eigrgeaklv cggtqlvdga
      361 yahgyfvtpa iftdvprdar iareeifgpv iavidvdgye daiavandsg yglaaslvtq
      421 darlmhrfvd dievgtvkin rtttgnlina pfgglkrsst atfresgrdg ldfylqvkti
      481 yrgv
//
LOCUS       WP_257958210            1712 aa            linear   BCT 02-MAR-2025
DEFINITION  ShlB/FhaC/HecB family hemolysin secretion/activation protein
            [Pandoraea commovens].
ACCESSION   WP_257958210
VERSION     WP_257958210.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 1712)
  AUTHORS   Desvaux,M., Parham,N.J. and Henderson,I.R.
  TITLE     Type V protein secretion: simplicity gone awry?
  JOURNAL   Curr Issues Mol Biol 6 (2), 111-124 (2004)
   PUBMED   15119822
REFERENCE   2  (residues 1 to 1712)
  AUTHORS   Walker,G., Hertle,R. and Braun,V.
  TITLE     Activation of Serratia marcescens hemolysin through a
            conformational change
  JOURNAL   Infect Immun 72 (1), 611-614 (2004)
   PUBMED   14688146
REFERENCE   3  (residues 1 to 1712)
  AUTHORS   Jacob-Dubuisson,F., Locht,C. and Antoine,R.
  TITLE     Two-partner secretion in Gram-negative bacteria: a thrifty,
            specific pathway for large virulence proteins
  JOURNAL   Mol Microbiol 40 (2), 306-313 (2001)
   PUBMED   11309114
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03865.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1712
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..1712
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /calculated_mol_wt=177189
     Region          44..549
                     /region_name="FhaC"
                     /note="Hemolysin activation/secretion protein
                     [Intracellular trafficking, secretion, and vesicular
                     transport]; COG2831"
                     /db_xref="CDD:442079"
     Region          695..849
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          924..1096
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
ORIGIN      
        1 maypdfphqs avvshgtctr fitqasaiac fgaliggltl hpemavaqts pqvvrapvrq
       61 giqdaqlerq rrdsqerqhr adapdvhlsa padgtespid ttqlpteapc vpltdititg
      121 pdgdalpsrf aaistalsrf vgqcagtkgi aliaslatda vlangwvttr vsvpeqdlag
      181 grltlhliig rissirfvdd gvrgswrsal plreddilsi hgleqgleql krmpsqdadi
      241 riepgkglgt sdvlidvqrr rpwrllasvd nsgtrdtgrl qgqlaigidn plglndlldl
      301 saqhdlstgd drfgtkggsv sysvpwgyst vsvfgstrty fqriaganet fvssgrnqta
      361 elrlervvhr dsrskttaea rigrrfgksf iedfeisqqy rnntylqlgi arrqylgavq
      421 adlalsyrqg mpwfgaqddl rdpvthqptp qtyryrmfla dmqwsapirl ggvplrltgt
      481 lhgqttanal wavdqmaigg rysvrgftgd qtlsaargff lrhdihvpla tsthavyvgi
      541 dygrvfgpgi aivtgrdvkv davldsiqda grvrsssyst evdsyeetar gtqlsagkgi
      601 giaagqaaal srlleqrgvs ayvstdksgt gdvtilgayl saggdapdrp ttkpapgrag
      661 ksdiqitatg ditvggvatq yddvrwtqrt sngllsstte tthgerhgtr ttgstlsgda
      721 vslmsgrdia iagshviadn dvvlgarrni disstedrgt slsssekstt gvfgggtsft
      781 igsrtekdrq qreqvnrtgs lvgavngdvm vragndfrqe gstvlardgs ieiaatrvai
      841 vesqdseksi herevkqsgl tvavssplls aaetlgqmgk avgkvndsrm kalgvaaggl
      901 aiknaadsvk nlqdaanvni svtvggskqq sretndstts tgstlragrn iaihatgdgd
      961 qssmqirgsa ieagdnvtla sdgaldilas tdtaehhrts sgvsggiglg ialgtkgsti
     1021 gvtanaslsr gkadgsdvth rsshvkagnv aeissggdtn irggtvsger viarvggdln
     1081 ieslqdtsry qskdqsisgs gtvgfggasg sinvshqqin sdfasvvdqa gikagdagfd
     1141 vtvkgntdlt gaviasteka vdanrnrlkt gslttrdien haeydafgis lgggistggg
     1201 dnakvgtdqk gdaqtganat pgtelpktgp vsvappivva agdsassvtr sgvsgaviei
     1261 tdearqldlt gktaeeaiad vnrdvssdrd gsnalankfd keqieagfei vralqrevgt
     1321 fvtnrakefe alkearkket dpvkiaaldg qiqdaakwap ggryrqivtv maaaaggnvt
     1381 agtgeflqra avgylqtlav ekvkqiadsl esesartalh givgcaggaa sggncgagam
     1441 ggaasvvlgn llnqiadtrn delpqqdkea rmnliesvva gitagtgnda ttasiasrle
     1501 lennqftlpl gtaksgsaga tlaeqmmqng asveeilseq krqlewegnv lpqpgtalve
     1561 havtvaaisp vavvgavata saaaggavit gtanavaqql akgeveikda aiaagigais
     1621 qgrgifttas vsaagaalga sikgddpina aipagiggaa gasfgnflvk nlawlignki
     1681 fveifgavgg saasefttnt vdkkikgiet sk
//
LOCUS       WP_257958232             934 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein [Pandoraea commovens].
ACCESSION   WP_257958232
VERSION     WP_257958232.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 934)
  AUTHORS   Aravind,L., Leipe,D.D. and Koonin,E.V.
  TITLE     Toprim--a conserved catalytic domain in type IA and II
            topoisomerases, DnaG-type primases, OLD family nucleases and RecR
            proteins
  JOURNAL   Nucleic Acids Res 26 (18), 4205-4213 (1998)
   PUBMED   9722641
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024755.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13362.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..934
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..934
                     /product="toprim domain-containing protein"
                     /calculated_mol_wt=104505
     Region          9..924
                     /region_name="PHA02415"
                     /note="DNA primase domain-containing protein"
                     /db_xref="CDD:177362"
ORIGIN      
        1 mhhtnnnama twfrdvkrrv dinelaeklg lrrdgdkgny hsphhddrna svsifddgha
       61 fkdwsadrgg scidflmhfa pgvesvmdaa kllsemqgip lpkscepmpt aleskeeyia
      121 kgvlaapdpv veyltgrgid esvirraikc gslgwntwhn ksvppgeksy gglaaafvvr
      181 aldtsrvmav dmryadpaln ggvktqchga klgygwtsdp arlrradtvy ivespinals
      241 veccalpgsf aafavrgtgn vekidwsflk nkrhvriald htdamnertg rragltaawh
      301 lsdtltamdi gslfvdmqdw edgedindvl kqhgagalst rlrsleewmi pgmpgggkrl
      361 egtrriflps hdfqvywrfr veddfthyvr kwkdadeeen psdrseekvd lcsfrvagis
      421 rlriqshlat ingtpdnqpe tvfgisaqvp rhgstlqrqv vgndklynle wwrsqfgaiw
      481 lpaqfsrmvn ifertadlqa rdvvnfvgla wrdgqlaamq ggdcyfvepq kqclyanmif
      541 prgtahnare virayqktfk gnaaatalvw algahlkavl gfyphlqmqa ekgsgkskll
      601 eslqttlafq vlsgqmlktd hrrrasvswt shpvgwdefs klpksiltdi dgllqstyrf
      661 eftrvgsslt pylmcapvll ageevdvesl qsklcrtsls vakqgdmiph nlpqfpvwew
      721 lqflarldpa rirdlhatyv aqaqqrsrae kgdatarrmv enyaavmtaw gllsefadld
      781 vdegyfvedl vaemnahlad tngtrlpwvw imeillsele akrfehpfaw deilidgkre
      841 lalflrpnhv mdhlstaphl rakfdglpik tgrvfkqqll qsgvvpvcgg kpmddverri
      901 sgrrhahlta irlskleqlg lyaspdvpas ygna
//
LOCUS       WP_257958238             275 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5677 domain-containing protein [Pandoraea commovens].
ACCESSION   WP_257958238
VERSION     WP_257958238.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039499.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18928.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..275
                     /product="DUF5677 domain-containing protein"
                     /calculated_mol_wt=31322
     Region          56..205
                     /region_name="DUF5677"
                     /note="Family of unknown function (DUF5677); pfam18928"
                     /db_xref="CDD:465916"
ORIGIN      
        1 mhnveelerd ppihewpewd wfdqvaalvk qtkrsisegd lntpaplypl ldsidesies
       61 lamlvrrqrl rdsyvlsrvi yetavnvcfl lvdpvplgkl afsharqksl rnlkrairia
      121 gtlifefepe gteqflsqpt nqawlrefts ksgreitswt penvqqrlda iflkfgeskt
      181 rglafglliy rnaseiahgt lfgalfswga mevgrplrsk edigkfrrke lrhmmklvsy
      241 sleslirvvs svteatdmda aatnaratyy grrgm
//
LOCUS       WP_257958352             127 aa            linear   BCT 02-MAR-2025
DEFINITION  IDEAL domain-containing protein [Bacillus sp. V3-13].
ACCESSION   WP_257958352
VERSION     WP_257958352.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. V3-13
  ORGANISM  Bacillus sp. V3-13
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020433.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08858.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Bacillus sp. V3-13"
                     /db_xref="taxon:2053728"
     Protein         1..127
                     /product="IDEAL domain-containing protein"
                     /calculated_mol_wt=14126
     Region          72..102
                     /region_name="IDEAL"
                     /note="A short protein domain of unknown function;
                     smart00914"
                     /db_xref="CDD:197982"
ORIGIN      
        1 mlvmtaankg feigdwvkgk srngelirgy ietidqvngi vkvnvldsdn eksigktiat
       61 lsrwvakldv aetrdeeelr ylidlalitk depwfteltt elsalkqgsq dtqqkkpanl
      121 tftnrlg
//
LOCUS       WP_257958359             272 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin-dependent oxidoreductase [Pandoraea commovens].
ACCESSION   WP_257958359
VERSION     WP_257958359.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 272)
  AUTHORS   Kisker,C., Schindelin,H., Pacheco,A., Wehbi,W.A., Garrett,R.M.,
            Rajagopalan,K.V., Enemark,J.H. and Rees,D.C.
  TITLE     Molecular basis of sulfite oxidase deficiency from the structure of
            sulfite oxidase
  JOURNAL   Cell 91 (7), 973-983 (1997)
   PUBMED   9428520
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012401.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00174.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..272
                     /product="molybdopterin-dependent oxidoreductase"
                     /calculated_mol_wt=30183
     Region          91..270
                     /region_name="SO_family_Moco"
                     /note="Sulfite oxidase (SO) family, molybdopterin binding
                     domain. This molybdopterin cofactor (Moco) binding domain
                     is found in a variety of oxidoreductases, main members of
                     this family are nitrate reductase (NR) and sulfite oxidase
                     (SO). SO catalyzes the...; cl00199"
                     /db_xref="CDD:469652"
     Site            order(108,110,112,159,198,227,232,240,243,245..246)
                     /site_type="active"
                     /note="Moco binding site [active]"
                     /db_xref="CDD:239026"
     Site            159
                     /site_type="other"
                     /note="metal coordination site [ion binding]"
                     /db_xref="CDD:239026"
ORIGIN      
        1 mtperkssil tsdapvvrdg eailhearal mtrrvsepsr rafltrtlsl ggvallsgcs
       61 lddnasvesa ltrisrwndr vqaalfrksv laptfpasai trpfpfnafy smdeapvvde
      121 aeyrlelsgl iadkapwrld alrdfaapra aeqitrhvcv egwsaigrwg gvtfadflrr
      181 igadtsakyv gfkcaddyyt sidmptalhp qtllaltydg qtlpreygfp mklriptklg
      241 yknpkhirai yvtntysggy wedqgynwfg gs
//
LOCUS       WP_257958415            1800 aa            linear   BCT 02-MAR-2025
DEFINITION  IPT/TIG domain-containing protein [Pandoraea commovens].
ACCESSION   WP_257958415
VERSION     WP_257958415.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 1800)
  AUTHORS   Bork,P., Doerks,T., Springer,T.A. and Snel,B.
  TITLE     Domains in plexins: links to integrins and transcription factors
  JOURNAL   Trends Biochem Sci 24 (7), 261-263 (1999)
   PUBMED   10390613
REFERENCE   2  (residues 1 to 1800)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Gleaning non-trivial structural, functional and evolutionary
            information about proteins by iterative database searches
  JOURNAL   J Mol Biol 287 (5), 1023-1040 (1999)
   PUBMED   10222208
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01833.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1800
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..1800
                     /product="IPT/TIG domain-containing protein"
                     /calculated_mol_wt=177737
     Region          <49..1336
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          1530..1780
                     /region_name="Autotransporter"
                     /note="Autotransporter beta-domain; pfam03797"
                     /db_xref="CDD:461054"
ORIGIN      
        1 msssirlrra epgarpglst lwlfwlkvll aivasvgass aiaapctfnw naapagqsvy
       61 tittadpnlg acdptregly staggdttal vaadgstlqa dltvatadyp liftpspatt
      121 ntswtftmyq vtgaaspvti nitrqlgvpl psstspssgp tgggntvvit gtnfvqgtqv
      181 ffdvnaatsv tvnsqtqita vapshaagpv svgvannggs sagsnlytyv pppavtgvsp
      241 tqgstaggts vtitgtnlad vtsvsfggsa gsitsktatq ivatapaasa gtvditvtsp
      301 ggtsaisgad qftyvnvptv snvspssgpi gggttvaisg snfvagsttv kfgattasgv
      361 svssasslta iapagaagtv ditvttaagt sataasdqyt yvappslsat spstgptagg
      421 tsvtitgtnf tsgstvtigg taassvtfns atsltvttpa haagaadivv ttaggsvtqv
      481 ggftfisppa vssvsptegp tagntavtls gtnftgasqv tfggtsasfv vvnatqisat
      541 apphsvgtvd irvttpggts atgpgdqyty tavptvtsis ptsgsgsggt svtitgtgft
      601 psstvkfgtt natnvsynss ttltanapag tgtvdvtvst sggtsatsan drftyiaapt
      661 vtglstnigs taggtsvtvt gtgftgatav kfgattagfs vssdtsittt spagsagvvd
      721 vtvtgpggts ttgavdrfty iappsaasis lsnvpfnssa vpipvdlsnh itsvavstga
      781 ahgtaaatgt tltytptpgy sgtdtftytm tnvagtstpg tvtvtvlpst faytpsapaa
      841 gtvgvaystt slasasggsg tysyvvvsga lptgltlssn gtlsgtpgat gtfsfsikat
      901 dtvtttnppv tsslltmtig vptitftpvv ladataavpy sqtvqatgga mpytyvmtgt
      961 lptglsfnpt tgtisgtptq tsagtsvtls atdanhfsas igyslrvlgp nlnittssla
     1021 vgtlgvaytq gisvsganag ytvtatglpn glqltqsggn ysitgtptaa gafsvtirld
     1081 dsttgtgapf srtvtlplnv ntgsmtltps alptpiagqa ytqtftatgg vapyrytvtt
     1141 galpagltld pvsgvlsgta tstgtstftv tvkdsstgpg tplsalqsyn vnitgqvasa
     1201 pavqtqtlss apvsfratan avggpftria iatppasgta vvngedivyt ptpstngdvt
     1261 faytltnaig tsapipvtvt vravpvtagp qetsvaangt adfdittgat ggpftganvv
     1321 sispanagta tivstsaapa aagvaraava tgnkytlrfv paaafagvav itytvsnana
     1381 tsapgtakvt vaprkdpttd pdvtgligaq veaarrfatt qignynqrle mlhgkgraps
     1441 snglnvvlps adrgnsrdpa rcqdvvgitd rdaclrgevs ptamnkaksl dvrdksdkta
     1501 gtsgtsgiat gdgpdlpgeg engdqrfayw tagtvdfgfa ntaaqrsgfk fttggvtmga
     1561 dyrfsdqfsl gagvgyghds tdigssgtrs tgdsysgaly asyrpipvlf vdavagygtl
     1621 sfdsrrwvid andfargkrn gqqffgslsa gyeyrtddwl fspygrltas rstldqyset
     1681 gaglnaltyf kqnvntlsgt lgvragfaka trigtfspyi rvelqhdfng qslaglayad
     1741 iassgpvyfv pgspygsdrv qvgagtklrt gtlifgldys vttgmgglqq gfrltftapf
//
LOCUS       WP_257958422             467 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Pandoraea commovens].
ACCESSION   WP_257958422
VERSION     WP_257958422.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..467
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=48940
     Region          8..453
                     /region_name="PRK10504"
                     /note="putative transporter; Provisional"
                     /db_xref="CDD:182502"
ORIGIN      
        1 msrralpflv astffmenld atiittslpa matdfgvaps qlsiglsayl valaafipas
       61 gwladrlgpr rvfpaaialf tlasvlcams tslgmftacr vlqglagamm vpvgrlvvlr
      121 ntpkpelvra iatitwpgla apvlgpalgg fisstwswhw iflinvplgl aafagalwlv
      181 gpspgerkpf dlpgfvmsgv gasllmfgve lasrtpadwp mvigclaigl lsmgwsirhf
      241 lhtphplinl aamrvqtfav tvwggslfrm tigsapfllp lmfqlafgls avtsgllmla
      301 lfagnlgikp attpilkrfg frrvllgngv lvvigflmca alssttpfwi valvllfggi
      361 crsmqfttla tmafadvppa dmsgaatlss alqqmmtgmg ialgalilkf tevagvapfs
      421 tasfrwtfvv maviallali dgmrlphdag aqvsghkssg akpkeas
//
LOCUS       WP_257958458             149 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6691 family protein [Pandoraea commovens].
ACCESSION   WP_257958458
VERSION     WP_257958458.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042761.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20398.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..149
                     /product="DUF6691 family protein"
                     /calculated_mol_wt=14637
     Region          4..120
                     /region_name="DUF6691"
                     /note="Family of unknown function (DUF6691); cl46265"
                     /db_xref="CDD:480605"
ORIGIN      
        1 mkkilfalig glvfgvglil agmanpakvl gfldiagkwd pslafvmgga vavglvgfrl
       61 aqsqalawtg eprvwpalkg ldkrlvggal lfgvgwgiag icpgpalvll gagsgkalvf
      121 vvamvvgmav havvtsgdsa ssasgkaak
//
LOCUS       WP_257958496             119 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Pandoraea commovens].
ACCESSION   WP_257958496
VERSION     WP_257958496.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 119)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 119)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..119
                     /product="VOC family protein"
                     /calculated_mol_wt=12878
     Region          5..118
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mkvnrivanl aaptpqalqa aqrfygellg ldllmdhgwi atygnaskms vqmsvategg
       61 sgtpvpdlsv evddvdeala rmreadvaie ygpadepwgv rrfyvrdplg rllnilahr
//
LOCUS       WP_257958528             514 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-linked oxidase C-terminal domain-containing protein [Pandoraea
            commovens].
ACCESSION   WP_257958528
VERSION     WP_257958528.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 514)
  AUTHORS   Mattevi,A., Fraaije,M.W., Coda,A. and van Berkel,W.J.
  TITLE     Crystallization and preliminary X-ray analysis of the flavoenzyme
            vanillyl-alcohol oxidase from Penicillium simplicissimum
  JOURNAL   Proteins 27 (4), 601-603 (1997)
   PUBMED   9141139
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02913.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..514
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=54867
     Region          24..514
                     /region_name="PRK11230"
                     /note="glycolate oxidase subunit GlcD; Provisional"
                     /db_xref="CDD:183043"
ORIGIN      
        1 mnapvtpqgq ptpsgetpag iapvdaeala arqrqlldal arilpphcil hrredttpye
       61 cdglaayrrv plavvlpese sqvqrilqac hqlgipvvpr gagtslsgga mpisdglvls
      121 lakfkkivev dpyartatvq pgvrnlaise aaapyglyya pdpssqiact iggnvaensg
      181 gvhclkyglt vhnvlrvrai tmsgeaiefg slgpdapgld llsvfigseg mfgvvteitv
      241 klipkaqtaq vimasfddve tggnavaaii aagiipagle mmdkpatqav eefvhagydl
      301 eaaaillces dgtpeevtee ilrishvlrt sgatrlqisr seeerlrfws grknafpaag
      361 rispdyycmd gtiprraigt llkriegleq qyglrcinvf hagdgnmhpl ilfngndlde
      421 whraeafgcd ileacvelgg titgehgvgi ekinsmcvqf saqerdaffg vkrafdpvgl
      481 lnpdkgiptr arcaeygkqh vrggllphpd lprf
//
LOCUS       WP_257958564              64 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-binding domain-containing protein [Bacillus sp. V3-13].
ACCESSION   WP_257958564
VERSION     WP_257958564.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. V3-13
  ORGANISM  Bacillus sp. V3-13
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015411.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03446.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..64
                     /organism="Bacillus sp. V3-13"
                     /db_xref="taxon:2053728"
     Protein         1..64
                     /product="NAD(P)-binding domain-containing protein"
                     /GO_function="GO:0050661 - NADP binding [Evidence IEA]"
                     /calculated_mol_wt=7169
     Region          1..>39
                     /region_name="YqeC"
                     /note="6-phosphogluconate dehydrogenase (decarboxylating)
                     [Carbohydrate transport and metabolism]; COG1023"
                     /db_xref="CDD:440646"
ORIGIN      
        1 mkigivglgk mgynlslnli dhryeevatd vkprtskafp rmalpgfhlf qhwsnsfpvh
       61 elfg
//
LOCUS       WP_257958571             144 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Bacillus sp. V3-13].
ACCESSION   WP_257958571
VERSION     WP_257958571.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. V3-13
  ORGANISM  Bacillus sp. V3-13
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 144)
  AUTHORS   Ronning,D.R., Guynet,C., Ton-Hoang,B., Perez,Z.N., Ghirlando,R.,
            Chandler,M. and Dyda,F.
  TITLE     Active site sharing and subterminal hairpin recognition in a new
            class of DNA transposases
  JOURNAL   Mol Cell 20 (1), 143-154 (2005)
   PUBMED   16209952
REFERENCE   2  (residues 1 to 144)
  AUTHORS   Brynestad,S., Synstad,B. and Granum,P.E.
  TITLE     The Clostridium perfringens enterotoxin gene is on a transposable
            element in type A human food poisoning strains
  JOURNAL   Microbiology (Reading) 143 (Pt 7), 2109-2115 (1997)
   PUBMED   9245800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013921.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01797.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Bacillus sp. V3-13"
                     /db_xref="taxon:2053728"
     Protein         1..144
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=17303
     Region          1..136
                     /region_name="RAYT"
                     /note="REP element-mobilizing transposase RayT [Mobilome:
                     prophages, transposons]; COG1943"
                     /db_xref="CDD:441546"
ORIGIN      
        1 mprkhrvwyp gaiyhimarg nkrsaiftdh ldylkyleil eevrnkfpfk lhsyclmtnh
       61 lhlqletaqh hiqhvmkelh sryaiyfnqr lkidghvfqg rygaklietd dyflevsryi
      121 hrnplqakmv enladyqwss ypsi
//
LOCUS       WP_257958617             425 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Pandoraea commovens].
ACCESSION   WP_257958617
VERSION     WP_257958617.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..425
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=43925
     Region          4..404
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(14..15,18..19,22,54,104..105,107..109,112,132,
                     135..136,139,235,238..239,242..244,247,274,278,327..328,
                     332,336,353,356..357,360..361,364)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340968"
ORIGIN      
        1 mtlwlaivav gltlrptlts ispllpqire atgmtypvaa lltslpvlam gagafaasgl
       61 trrfgerrgv llglvalala cgvrffaddt vtmiatalas gigiaiiqal lpgvvkanys
      121 aarmtsmmgl ysaalmgggg lgaaaspwaa seagdwrvgl gmwlavvgva alawwraplk
      181 vhavaqavap aahttasaed lraacraats gisgkppsml dllrkhrawt lavyfglinc
      241 tyttmvawlp pfyqqrgmsa tqsgallagl tacqvvaalm lpwlarrnvd rrrwltlala
      301 atlaglaglv vapdaapwww iggigfglgg tfslglvlal dhhahprhaa alaafmqgvg
      361 fciaavapfa sgavmattgs fmpswigliv lnvalialtw rfdpqgyasa lglsrdghvg
      421 rhrsa
//
LOCUS       WP_257958332             253 aa            linear   BCT 02-MAR-2025
DEFINITION  CerR family C-terminal domain-containing protein [Pandoraea
            commovens].
ACCESSION   WP_257958332
VERSION     WP_257958332.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 253)
  AUTHORS   Yamanaka,Y., Shimada,T., Yamamoto,K. and Ishihama,A.
  TITLE     Transcription factor CecR (YbiH) regulates a set of genes affecting
            the sensitivity of Escherichia coli against cefoperazone and
            chloramphenicol
  JOURNAL   Microbiology (Reading) 162 (7), 1253-1264 (2016)
   PUBMED   27112147
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020771.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09209.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..253
                     /product="CerR family C-terminal domain-containing
                     protein"
                     /calculated_mol_wt=28036
     Region          29..247
                     /region_name="PRK11552"
                     /note="putative DNA-binding transcriptional regulator;
                     Provisional"
                     /db_xref="CDD:236928"
ORIGIN      
        1 mtgtsragrv rmqstaarpr havdtgyqrg eetrariila aikcfgefgf agastrdian
       61 vagvnapalq yyfdnkegvy kacveyilgl vlrqmgeaie saervmadpd atdkqlidaf
      121 celqnrkagf meevpeiegw nmfmareqag lgpeagfkvf hdrfsrrlas vganivtrla
      181 gvapddeamr iravcistlg mafrvmrrsv dssmgwdsep npernrmvre avleqtryll
      241 ertvrqrkaa aks
//
LOCUS       WP_257958635             408 aa            linear   BCT 02-MAR-2025
DEFINITION  transketolase-like TK C-terminal-containing protein [Pandoraea
            commovens].
ACCESSION   WP_257958635
VERSION     WP_257958635.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 408)
  AUTHORS   Veitch,N.J., Maugeri,D.A., Cazzulo,J.J., Lindqvist,Y. and
            Barrett,M.P.
  TITLE     Transketolase from Leishmania mexicana has a dual subcellular
            localization
  JOURNAL   Biochem J 382 (Pt 2), 759-767 (2004)
   PUBMED   15149284
REFERENCE   2  (residues 1 to 408)
  AUTHORS   Gerhardt,S., Echt,S., Busch,M., Freigang,J., Auerbach,G., Bader,G.,
            Martin,W.F., Bacher,A., Huber,R. and Fischer,M.
  TITLE     Structure and properties of an engineered transketolase from maize
  JOURNAL   Plant Physiol 132 (4), 1941-1949 (2003)
   PUBMED   12913150
REFERENCE   3  (residues 1 to 408)
  AUTHORS   Arjunan,P., Nemeria,N., Brunskill,A., Chandrasekhar,K., Sax,M.,
            Yan,Y., Jordan,F., Guest,J.R. and Furey,W.
  TITLE     Structure of the pyruvate dehydrogenase multienzyme complex E1
            component from Escherichia coli at 1.85 A resolution
  JOURNAL   Biochemistry 41 (16), 5213-5221 (2002)
   PUBMED   11955070
REFERENCE   4  (residues 1 to 408)
  AUTHORS   Fiedler,E., Thorell,S., Sandalova,T., Golbik,R., Konig,S. and
            Schneider,G.
  TITLE     Snapshot of a key intermediate in enzymatic thiamin catalysis:
            crystal structure of the alpha-carbanion of
            (alpha,beta-dihydroxyethyl)-thiamin diphosphate in the active site
            of transketolase from Saccharomyces cerevisiae
  JOURNAL   Proc Natl Acad Sci U S A 99 (2), 591-595 (2002)
   PUBMED   11773632
REFERENCE   5  (residues 1 to 408)
  AUTHORS   Wikner,C., Nilsson,U., Meshalkina,L., Udekwu,C., Lindqvist,Y. and
            Schneider,G.
  TITLE     Identification of catalytically important residues in yeast
            transketolase
  JOURNAL   Biochemistry 36 (50), 15643-15649 (1997)
   PUBMED   9398292
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046326.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22613.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..408
                     /product="transketolase-like TK C-terminal-containing
                     protein"
                     /calculated_mol_wt=43870
     Region          <182..406
                     /region_name="PRK13012"
                     /note="2-oxoacid dehydrogenase subunit E1; Provisional"
                     /db_xref="CDD:237267"
ORIGIN      
        1 mrewvsrgra alegrsapde vtrqaalaci gklravrsag qtpvspsgal aslthalseg
       61 etsdkvwivd sdaeiapppp kdpaskrkrs skpvplasai vtwfrsapar erpllyllhs
      121 ptlrgvlnag ieaaglkdaq dagagrrgif lndatiwspd rfkrvrpelp mwlaaqaewl
      181 pydpasaqel kallcaalda lyvrgesgfc ylsahevpha qsraltrtda rnafkgmyrl
      241 rtlpdtnppy vvrlcgagra lanvleaarw lqldwgvace vwscpsytrl areageaerm
      301 alqrpdaaah mphlvqclgd gsapvlavtg yarhianqig afvparfaal gsddadigea
      361 tdesgerlgt gdapgvrwiv lnalrllvde gtlprtriad atrrygvv
//
LOCUS       WP_257958655             380 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Pandoraea commovens].
ACCESSION   WP_257958655
VERSION     WP_257958655.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..380
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=40363
     Region          2..370
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mkivlfvtgl qlggaetqva dlargflarg hdvtlvsltg pcaialptsp qftlvelkag
       61 kspgsligal vrfaaylrtw qpdvvhahmv hanlvarvar wfapvpvlvt sahsrneggr
      121 armlayrltd rwtdlttnvs ddavaafvaq raapaarivs mpngidtgry hpdaqaraaw
      181 rnasdvlpna gapivfaagr mveakdyptl idafayvana mpearlfiag egplrasvqa
      241 hvdarglaha vtllgrrndi aqwmqaadvy vmssaweglp lvvgeamasg lpvvstdcgg
      301 vrellgdaqh ggahntlvpv gdaqalgdal lrqlrasaea rqalgaanre rivthfslda
      361 ivtrwldtys hlratrragy
//
LOCUS       WP_257958661              99 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Bacillus sp. V3-13].
ACCESSION   WP_257958661
VERSION     WP_257958661.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. V3-13
  ORGANISM  Bacillus sp. V3-13
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Bacillus sp. V3-13"
                     /db_xref="taxon:2053728"
     Protein         1..99
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=11046
     Region          <18..96
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mgvwlnefyr fyfteitmpg ptrtekveeh fqsmaaelgq tfeeiekdlf enrlpgslvk
       61 rfitgkevan lvvflaseqa aaitgtamrv dggivrsil
//
LOCUS       WP_257958677             325 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Pandoraea
            commovens].
ACCESSION   WP_257958677
VERSION     WP_257958677.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 325)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..325
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=35570
     Region          3..312
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(8,10..11,13,34..36,72..74,117..119,144,148,171..174)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187580"
     Site            order(91,119,144,148)
                     /site_type="active"
                     /db_xref="CDD:187580"
ORIGIN      
        1 meriliigan gqigselveg laaqygnenv vatdiapgps rhpvhyetld vldaarlsal
       61 verfgitqif hlaallsatg etrplqawtl nmngllnvle larehqskgk nlrvfwpssi
      121 aafgphtpav etpqlaimdp ttmygiskqa gerlceyyft kfgvdvrslr ypgvisfktp
      181 pgggttdyai difqaarrge tytcflkeda tlpmihmpda vratlelmna dasrlrvrss
      241 ynvagvsfdp ktlaaaiarr vpgftvkyap dfrqaiaetw phtlddthar ydwgwkpafd
      301 ldamvddmla nvpldwhapa lgnaa
//
LOCUS       WP_257958473             155 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Bacillus sp. V3-13].
ACCESSION   WP_257958473
VERSION     WP_257958473.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. V3-13
  ORGANISM  Bacillus sp. V3-13
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 155)
  AUTHORS   Yang,Z. and Klionsky,D.J.
  TITLE     Permeases recycle amino acids resulting from autophagy
  JOURNAL   Autophagy 3 (2), 149-150 (2007)
   PUBMED   17204852
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023128.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11700.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Bacillus sp. V3-13"
                     /db_xref="taxon:2053728"
     Protein         1..155
                     /product="MFS transporter"
                     /calculated_mol_wt=16657
     Region          <2..137
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mvseisgstg rvawgiisdk fyngkriiil lmigiitaic svtvailpet isfwalapii
       61 sifgfaisgf ngiwmnlase lvpkeqagis sgfsilfgsa gvivmpplfg llvdetgnya
      121 igwffiaalm ivvllilmii hqqekrkfky agskl
//
LOCUS       WP_257958789              63 aa            linear   BCT 02-MAR-2025
DEFINITION  PTS transporter subunit IIC [Bacillus sp. V3-13].
ACCESSION   WP_257958789
VERSION     WP_257958789.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. V3-13
  ORGANISM  Bacillus sp. V3-13
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 63)
  AUTHORS   Yew,W.S. and Gerlt,J.A.
  TITLE     Utilization of L-ascorbate by Escherichia coli K-12: assignments of
            functions to products of the yjf-sga and yia-sgb operons
  JOURNAL   J Bacteriol 184 (1), 302-306 (2002)
   PUBMED   11741871
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015568.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03611.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..63
                     /organism="Bacillus sp. V3-13"
                     /db_xref="taxon:2053728"
     Protein         1..63
                     /product="PTS transporter subunit IIC"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /calculated_mol_wt=6657
     Region          1..>55
                     /region_name="PRK12997"
                     /note="PTS sugar transporter subunit IIC; cl04451"
                     /db_xref="CDD:471037"
ORIGIN      
        1 mlntivsils npaiilaiia avglialrks asdiikgtlk tvfgflilqq ganiikillk
       61 rfr
//
LOCUS       WP_257958845             224 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxylesterase family protein [Bacillus sp. V3-13].
ACCESSION   WP_257958845
VERSION     WP_257958845.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. V3-13
  ORGANISM  Bacillus sp. V3-13
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012363.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00135.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Bacillus sp. V3-13"
                     /db_xref="taxon:2053728"
     Protein         1..224
                     /product="carboxylesterase family protein"
                     /calculated_mol_wt=24074
     Region          <1..224
                     /region_name="PnbA"
                     /note="Carboxylesterase type B [Lipid transport and
                     metabolism]; COG2272"
                     /db_xref="CDD:441873"
ORIGIN      
        1 mastlpwqpv vdgeiiparp idrivagsga gvdilvgtnt dewrlflvas gainhvthea
       61 lagavaaygl pveatlaays aahpgaspgd llaaiqtdww cripairlad aharrtsaty
      121 myefawrspq lngllgacha leiafvfdtl dkgfkpmvgp llgdnppqql adtmhaawva
      181 fatngdcgwp kydlnrratm rfdttsvvvd dpraverelw egvr
//
LOCUS       WP_257958859            2439 aa            linear   BCT 02-MAR-2025
DEFINITION  NEL-type E3 ubiquitin ligase domain-containing protein [Pandoraea
            commovens].
ACCESSION   WP_257958859
VERSION     WP_257958859.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 2439)
  AUTHORS   Quezada,C.M., Hicks,S.W., Galan,J.E. and Stebbins,C.E.
  TITLE     A family of Salmonella virulence factors functions as a distinct
            class of autoregulated E3 ubiquitin ligases
  JOURNAL   Proc Natl Acad Sci U S A 106 (12), 4864-4869 (2009)
   PUBMED   19273841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025849.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14496.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2439
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..2439
                     /product="NEL-type E3 ubiquitin ligase domain-containing
                     protein"
                     /GO_function="GO:0004842 - ubiquitin-protein transferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0016567 - protein ubiquitination [Evidence
                     IEA]"
                     /calculated_mol_wt=267856
     Region          <44..550
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          1017..1534
                     /region_name="DUF6543"
                     /note="Family of unknown function (DUF6543); pfam20178"
                     /db_xref="CDD:466329"
     Region          <1829..2437
                     /region_name="PRK15370"
                     /note="type III secretion system effector E3 ubiquitin
                     transferase SlrP"
                     /db_xref="CDD:185268"
     Region          2058..2079
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          2080..2094
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
ORIGIN      
        1 mkrdvlscfa vlgtaaglat ggapilgvgl alggafsall kwgptnsasr eaafqelvte
       61 mraagvadad ikklsgvcrd ngsqaallha ifpelsspal amwlkdverl dayrlldfgk
      121 vvfqlrqaln lapqrnpdev lrmlpvgywv gsqeaenarq fdpskvgvek plataarevl
      181 shlygsfrpt pvdptpvsaa qaertavehr darawiennd lrgmdagrae valgdwqart
      241 aqdvlrrkrd alleqkdpik agthsrqlar qaraielqqa llgesipakr dvlrgelrel
      301 kqaidvwhlt kgertaqhre rvglapfapp tlpeprrvvs vseasacnes gsgifvggep
      361 lmtamsaapr hggalqsvsr alghigrpig afvasifapd spntrsadve qgtpltdfrd
      421 grpvaapvdi egavrvveap qsavrtwiag alkttlgsas lytgyaglew lrsrgpsgaq
      481 pspasqagla assltplqqa lidtlagsvh anengawgst ldavavilrg epdphapqvi
      541 asvtvvlred fndvasvyan dfdgpsfidg fgslgeaddf gefdvpddvd aeglphrrfr
      601 ravdasgaaq kleqqrseea gdratkarvv eiidavaqhe qsasandekl lfgalpahwr
      661 tdptldwlsr apeseqklwv havqkandrf nsfskainda qpldgiyaaf anlgldglpa
      721 awsvtcpvti pgiqapvtar qtlieacltg dtrrdpqkfe gfidgvpasa dqtrrmrell
      781 gasecrtspq arlmsmtsni pslkihlaaf leselhrdil eaklkghltg grdawirald
      841 lmhkamsdap dvsvgelrla ppgmseialv pwlvitdkpr rdtdsngcvv lyrpiektws
      901 vfnsrqelfq yldvarmrnt lagemnpatv ttggddalrl mpqvalesaa prhrtelrkf
      961 frtqaenpan wkpeylrfea yegerlatrm qawaqrqlel htqqleplar vpglasqlvd
     1021 aaalerhfka yedehlpplr eftrriestk ltrglrgqgl pdlgeidadr ifidfngrnm
     1081 tvtdwvlegy rkhgdnvlas tnnfqrdaqi sagnaevaar lstpaykqsl esnlratyag
     1141 dafirhlrdw lastdaesqt frrltqaamr mqlqvtlsre iangrieqqd aswmttlvdg
     1201 lplhvasgdt fiselsiddr ripgllvftq rkrsssdats evlrrdfvwl pegpygtewl
     1261 pldeyrqvmh qspydddlrg rvlhpdrvvi dnalnhgrgv dasrvktqpl tdfaslsdqr
     1321 lldrisnaqe dttsrgeviw gevvkglrfa amplcvattg gagfllcgld tavlagidie
     1381 savsnvrrgd mngalldvaf lwadaldigp alrvvnpgrl lkwagkahfa nagevsevls
     1441 qvrgqraafd daghlrdtla rhgidigaar ptpiragtvs ggvryehegr dyikdrgrvf
     1501 evfsdnawst vrvrdpqrvn gpgvpvtfsn grwqwddggl lggaptsakr priadpvnyl
     1561 vdlgmsarda rvfldafvfp pgvedsrrla lvqemhgglq vpgwarryvr asergqvfgs
     1621 mgqtpvevlg ksggavdpsr rlnrdqfefp naamwdwfdl alskgerptw aakyaktldg
     1681 mfapeevlaa kgifdspeaa erylssfdpl dasdrtrlan drmglrhtpe waypylrpte
     1741 aiavlrsegm taeqmlvatg afasdsavrn ylsqfdiskm qihgdarewi aqrrllsgat
     1801 plglgeflrt pidirkpask mlidagifpt qraasaylsk fttynplrrk lmndqikqia
     1861 ltrilegvpp awsfelveaq dvlalfgpdr iprnigslti haseagrlel ptvmphlrtl
     1921 hitgpidltl pvelpkiksf ivkgarvprd fsvpvgarat tvvidatnah tiripygchg
     1981 irnigmdgnp alrsvvvasa ppgavdalpn alviemlnnr rlqeielple lpqllnlnla
     2041 gndltrfpvt sehrmntlrt lnvrnnriat lgglphaphl qtlnldrnqf asipasvagw
     2101 rgespaenif arrlnvylee npiseehirq wtgrvqinne ariyfsmanp fahlearpla
     2161 davfdwfpal tqdahrkvwe afadeanamd fsafldrlrr tvnfnepafr arvqkwlerl
     2221 eadkalrddt fpvslcatas cedrvthahg qmkqvllaad vangvynddp kllretmrgl
     2281 fdlevleqia rekframggg deidvylayq vklrgplslp tdatdmryfa isgvteadla
     2341 aakarvlsee kthfdsylsn sapmqkaikn kypeafakae daltditada eafeqrvkah
     2401 lkdtgmedda daireagpvv lralthefyg plvrdlleg
//
LOCUS       WP_257958869             258 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Pandoraea commovens].
ACCESSION   WP_257958869
VERSION     WP_257958869.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 258)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..258
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=28199
     Region          3..239
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Site            order(8,10,31,55..56,177,218)
                     /site_type="active"
                     /db_xref="CDD:277317"
     Site            order(8,10,31,55,177,218)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277317"
ORIGIN      
        1 mrlhilsdlh lsvaplaipd veadvtilag disrpaqaie watqlprpvi yvpgnhefyg
       61 atlagtlael rrlttgtnvh llergavvig gvrfvgttlw tdfalydaeg khdaaveesl
      121 kfvrdftrir vgdpaapwsd lpffspddca alcrenvawl artfaaphdg ptvavthhap
      181 tpqsihprfa gslvnpafis dltslieqsd aalwihghth dsfdyrvght rvlcnprgyc
      241 fegrvenpaf dpqmivrv
//
LOCUS       WP_257958947             652 aa            linear   BCT 02-MAR-2025
DEFINITION  Mu transposase C-terminal domain-containing protein [Pandoraea
            commovens].
ACCESSION   WP_257958947
VERSION     WP_257958947.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 652)
  AUTHORS   Rice,P. and Mizuuchi,K.
  TITLE     Structure of the bacteriophage Mu transposase core: a common
            structural motif for DNA transposition and retroviral integration
  JOURNAL   Cell 82 (2), 209-220 (1995)
   PUBMED   7628012
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020859.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09299.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..652
                     /product="Mu transposase C-terminal domain-containing
                     protein"
                     /calculated_mol_wt=74336
     Region          <289..462
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 manftkdqti frgdakfriv riqndvaqle ntvtgefssh deadlleeyv kgylrtintk
       61 kyqrapkpns indlaraasg advqgdfvtr rrvnylvmle rmgafessrl alhdaihava
      121 vdlsdptpph ettvyrwrrk yhlahrdira lldqsarrgg rgrsrldpiv egiihekiet
      181 tflnnrrgkp eevhnavfle iqrqntmrie sewlevpglr tierriqeid aydlavaryg
      241 vreakrrfad qhqarqvsri leiveldhtp vdlmvtdehg vcigrpmftv vidrfsrcvl
      301 gfcfslaghg vhavfealrh ammpksylge afpeldlewp chgwperllm dngremhaya
      361 vvdaltnlgi iceyaasrtp ndkpfverfv ktfnysfiht lpgttlakig drigfkaede
      421 acltleklne mahtwitsvy hvrphrglng rapldvwkes aavfppqlkc naedlsiefg
      481 syteravqhy gidlntfvys ssellalrrm lpvnqkvhvk apfenagqiw vwnpiesryf
      541 aaynkddryv gltieqakal tkqshpldph qrtrasaeer ireqsgdamr akelktrkrg
      601 arqahitsks inrpqlpape lapiqtpnsl vgddelyefa vdvsgegdrh ds
//
LOCUS       WP_257958906             614 aa            linear   BCT 02-MAR-2025
DEFINITION  nitrilase-related carbon-nitrogen hydrolase [Bacillus sp. V3-13].
ACCESSION   WP_257958906
VERSION     WP_257958906.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. V3-13
  ORGANISM  Bacillus sp. V3-13
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 614)
  AUTHORS   Pace,H.C. and Brenner,C.
  TITLE     The nitrilase superfamily: classification, structure and function
  JOURNAL   Genome Biol 2 (1), REVIEWS0001 (2001)
   PUBMED   11380987
REFERENCE   2  (residues 1 to 614)
  AUTHORS   Bork,P. and Koonin,E.V.
  TITLE     A new family of carbon-nitrogen hydrolases
  JOURNAL   Protein Sci 3 (8), 1344-1346 (1994)
   PUBMED   7987228
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012993.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00795.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Bacillus sp. V3-13"
                     /db_xref="taxon:2053728"
     Protein         1..614
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /GO_process="GO:0008152 - metabolic process [Evidence
                     IEA]"
                     /calculated_mol_wt=67558
     Region          46..307
                     /region_name="nitrilase"
                     /note="Nitrilase superfamily, including nitrile- or
                     amide-hydrolyzing enzymes and amide-condensing enzymes;
                     cl11424"
                     /db_xref="CDD:448250"
     Site            order(86,158,162,165,191..192,194..195,216)
                     /site_type="active"
                     /db_xref="CDD:143587"
     Site            order(86,158,191)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:143587"
     Site            order(159..162,164,171..173,192,194..198,201..202,
                     226..228,230..231,252..253,301..304)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143587"
     Region          331..586
                     /region_name="Nit2"
                     /note="Omega-amidase YafV/Nit2, hydrolyzes
                     alpha-ketoglutaramate [Energy production and conversion];
                     COG0388"
                     /db_xref="CDD:440157"
ORIGIN      
        1 mqsrkwiiml iivismvslg gyywnqdntp alakekknte kvsdafkvas iqfnpilner
       61 dknvnellkv teeafkngak lvvapematt gyyyadreai kpfvdtipgk ttaafeklak
      121 eydsyivfgm aevdeetdly ynsaalvgpe gyvgkyrktq mwetemhwaa wgdlgvpvfd
      181 teigkiaini cmdsayaeta rlagiqgaei lafptnssaq aisalparaq qngmyvvsan
      241 rsntengfhm iggsaiwspe gkklaeapvv mtpgedidep tityatidpk lfdnenkeal
      301 dgrrpelyke lihtvapwdy tknttsheiv aaalqyepvt gnkeknkeki vsliqqaknn
      361 nadlnlvvlp elsltgpvdg mkkkdikafa etsngesaqf iaelakqfqv sivfgfieqn
      421 nknlynsall isqdgstagk yqkthlsend kkwatpgssl pvfetenlgk igillgedae
      481 ypeasgvlsv kradiitips awngqyggem einkvisanq ypegsmvtwd avaigaqayt
      541 vvanyvgtek nylggsslyt ldplyaldqp vvasedteqa lvvefetlqs dawfnqemli
      601 lsrqpayfkp lvqe
//
LOCUS       WP_257958956             180 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Bacillus sp. V3-13].
ACCESSION   WP_257958956
VERSION     WP_257958956.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. V3-13
  ORGANISM  Bacillus sp. V3-13
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12697.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Bacillus sp. V3-13"
                     /db_xref="taxon:2053728"
     Protein         1..180
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=20555
     Region          36..151
                     /region_name="YdeN"
                     /note="Predicted esterase of the alpha/beta hydrolase fold
                     [General function prediction only]; COG3545"
                     /db_xref="CDD:442766"
ORIGIN      
        1 mlfihcagpq gpqqgsqpll aylqaklgee yvfykpklsd pespayrdwk rlldeqfkvl
       61 sgqqvivvgh slgasvllky lsendpnivi eglfllatpy wgtdedwqnv syqlqanyse
      121 hlppipniyf yhsridpvvp yvhfekylqd lsgvngrvld geehyfeegl pmlvedlrkk
//
LOCUS       WP_257958959             407 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6361 family protein [Pandoraea commovens].
ACCESSION   WP_257958959
VERSION     WP_257958959.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039739.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19888.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..407
                     /product="DUF6361 family protein"
                     /calculated_mol_wt=45653
     Region          9..396
                     /region_name="DUF6361"
                     /note="Family of unknown function (DUF6361); pfam19888"
                     /db_xref="CDD:466222"
ORIGIN      
        1 mtaasrwewl dfdeaesnqv rdflsqdvdg egvdalriga svrdrisdsl fpgtstqyrr
       61 lryvflipav lrhnkttidn lsevqskfna alnsangnet gvigrrttgr dfvhlywtal
      121 rtwkfltplt gddrdvtvan glaalkstva vdeegnplfd qrvqwdrkvv slidefwadd
      181 gaaqpsihcr qaevdfilek wlelpgsppl aaiasqlrng kkasmagypw dvnvgsssar
      241 tellrakaas licwsaqlay nfallkeakk lqskglettw tvrkqdlgat eqriakqyek
      301 wkasceveks tlepwinpsy wgnlggeasr rfladttdrl mkgetdltss dwrdwvalre
      361 rvnpapklgn phhlaswsgt pematrwdfr wsacvrgfvk daenprg
//
LOCUS       WP_257958961             991 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase family protein [Pandoraea commovens].
ACCESSION   WP_257958961
VERSION     WP_257958961.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04851.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..991
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..991
                     /product="DEAD/DEAH box helicase family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=110608
     Region          15..>46
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Region          <816..>873
                     /region_name="DpdE"
                     /note="protein DpdE; NF041062"
                     /db_xref="CDD:468989"
ORIGIN      
        1 mkdsslldef hlqefqkrtv qhayarmfen gqrrfliade vglgktkvaq gviamatarr
       61 pqsnvvylas sghivaqnlk klktsrltpe sfgslsllae kiyqqdvrgk ligltpikdl
      121 rddhfgsvhe rvllykllmr ryrslmlepd vraffkgnrv sdqtfnefae qplpsklrda
      181 ferklkseti ieqlkdpqlr kkhkraivgr lravlarcal eklspalivv deiqrfsgdl
      241 iaewptpqve yllerrmlvl satpyqpgap gddsgknphk gfmdlvgfln cgqasmvqnv
      301 qlalaemrsa lrekeiskav lqlavdnlgn hlrdfmvrte rpfdahvqri aveasmderd
      361 ltalrqaidl lrradpsakn krhrfaelvd lwkstpyvis alsaryvtgr afaeavgkrl
      421 pvpaaltssq lnrkaplvdp ahprlrammk emgtdakdrr lwlpptrpyv enpsrsldnp
      481 psktlvftsw saappaiata lnlcveprps rekdlefsrv tnagqksmtv rsvylisapl
      541 wrfaessdpf eamrgsgkal paskliseir kqlegaghlk vsraarpqnl vdvalglnag
      601 plypkpsvqt asylvpardl mnqvqeirra dvtvmeanel aelaagapgt cayralrrai
      661 pgdtnrealf gaaiaigysi srlfqrpaav avveggrsnk kkpywrrvis fclendlqsv
      721 ldeyvfllvr dslekdperl anevaeaihv alstvgglhv arpragrksq ygaamyaral
      781 gehdsppddd praqkaadkr skrparrrgr hanplltafn spfppfvlat tstgqegldm
      841 hrycrrlvhw nlptsplale qregrvdryl slgvrtsiak lnipanalgs tpslanpwel
      901 lvqaareqsd khnsilaplw hygegqpika ialnipfsre etawarllee aswyrlvlgq
      961 pdphallerl snsseknrre ingvrldlap p
//
LOCUS       WP_257958977             533 aa            linear   BCT 02-MAR-2025
DEFINITION  rhodanese-like domain-containing protein [Pandoraea commovens].
ACCESSION   WP_257958977
VERSION     WP_257958977.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 533)
  AUTHORS   Gliubich,F., Gazerro,M., Zanotti,G., Delbono,S., Bombieri,G. and
            Berni,R.
  TITLE     Active site structural features for chemically modified forms of
            rhodanese
  JOURNAL   J Biol Chem 271 (35), 21054-21061 (1996)
   PUBMED   8702871
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00581.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..533
                     /product="rhodanese-like domain-containing protein"
                     /calculated_mol_wt=57869
     Region          18..103
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            70
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238790"
     Region          121..229
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            193
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238791"
     Region          268..360
                     /region_name="4RHOD_Repeat_3"
                     /note="Member of the Rhodanese Homology Domain
                     superfamily, repeat 3. This CD includes putative
                     rhodanese-related sulfurtransferases which contain 4
                     copies of the Rhodanese Homology Domain. This CD aligns
                     the 3rd repeat which does not contain the putative...;
                     cd01534"
                     /db_xref="CDD:238792"
     Site            330
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238792"
     Region          381..524
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            431
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238793"
ORIGIN      
        1 mtsftphfvs pallkdwlhd gteiavfdvr ehgqygeahl fygvtlpysr leldivrlap
       61 rrdarivvyd tdqsvavlaa qrldalgysd vyvleggtqa wqaagftlfa gvnvpsktfg
      121 elvemayhtp rvtarelaam rergdnvvil dgrpvneylk mtipssiccp ngelgyrird
      181 lvpdtttpiv vncagrtrsi igaqtlinlg ipnpvmalen gtqgwyledl plehgstrry
      241 pdavspasvt qmrdasgala erfavpevda stfaqwakdt srtlflcdvr tpeeyaagtl
      301 pgaqhtpggq liqatdqyvg vrharvvlfd ndgvrapiva swlrqlghda yvlrdglnsg
      361 aslaaptpgv ettlpeidva tlktaladgs atvidvrpsm sfrrehatga rwairprlpk
      421 lpasgnvvli adergvaelf aadwrrenaq dsrtfsllag gfkawaaagl pveatpdspp
      481 dadcidylff vhdrhdgnka aarqylawet gllaqldehe rgafrigdaa vak
//
LOCUS       WP_257958981             367 aa            linear   BCT 02-MAR-2025
DEFINITION  FecR domain-containing protein [Pandoraea commovens].
ACCESSION   WP_257958981
VERSION     WP_257958981.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 367)
  AUTHORS   Van Hove,B., Staudenmaier,H. and Braun,V.
  TITLE     Novel two-component transmembrane transcription control: regulation
            of iron dicitrate transport in Escherichia coli K-12
  JOURNAL   J Bacteriol 172 (12), 6749-6758 (1990)
   PUBMED   2254251
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04773.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..367
                     /product="FecR domain-containing protein"
                     /calculated_mol_wt=39201
     Region          27..339
                     /region_name="PRK09774"
                     /note="fec operon regulator FecR; Reviewed"
                     /db_xref="CDD:236622"
ORIGIN      
        1 mirptpsnes aarlaattsl peavtlaate wfvrlqavgt ndkadadtha dwqrwhdada
       61 rhalawqrlv dfgahlrtip plvahntlvr ananqgrrrv lgliavagvt gavwsasdsn
      121 tvhawradls tgvgerrtvq ladgtvlaln tdsavdlhfs qdvrrlrlvr geiavttgad
      181 adhghrpffv dtaqgslqal gtrfavrqhd dsaavavleg avrvvpanat daavvltagq
      241 gatfdatalr srfddvgvan aaaawtqgml vvhamplgaf laelgryrrg hlgcapeiar
      301 lpvsgiypvd dtdrvldmls ralpvdvqry trwfvrvqpg nnasantgrs ptevptrrai
      361 ggdrtht
//
LOCUS       WP_257959004             283 aa            linear   BCT 02-MAR-2025
DEFINITION  TOBE domain-containing protein [Pandoraea commovens].
ACCESSION   WP_257959004
VERSION     WP_257959004.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 283)
  AUTHORS   Koonin,E.V., Wolf,Y.I. and Aravind,L.
  TITLE     Protein fold recognition using sequence profiles and its
            application in structural genomics
  JOURNAL   Adv Protein Chem 54, 245-275 (2000)
   PUBMED   10829230
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015424.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03459.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..283
                     /product="TOBE domain-containing protein"
                     /calculated_mol_wt=28678
     Region          41..279
                     /region_name="PRK10676"
                     /note="DNA-binding transcriptional regulator ModE;
                     Provisional"
                     /db_xref="CDD:182640"
ORIGIN      
        1 mvsepsstpd svlrngtgda lqvsgslwlh rgnssiggqa riallehias qgsitaaaka
       61 agmsykaawd avdamnqlag eplverstgg rggggtrlta rgaklvaafr aveaaqqqfl
      121 arvandlehf deqwpviarl glqtsarnql hgtitavrhc gvndevtltl pggeaitasl
      181 thhstqtlgl avggqafali kapwieiarg adlaglptan rlsgivdavs ddsgqaevil
      241 alpggsrlaa vmpqdtltar gltagigata afaavsviig vma
//
LOCUS       WP_257959005             537 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Pandoraea commovens].
ACCESSION   WP_257959005
VERSION     WP_257959005.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 537)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..537
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=58869
     Region          26..511
                     /region_name="YjcC"
                     /note="Redox-sensing c-di-GMP phosphodiesterase, contains
                     CSS-motif and EAL domains [Signal transduction
                     mechanisms]; COG4943"
                     /db_xref="CDD:443970"
ORIGIN      
        1 miqhsrvvqw lvtglvvavt lavvlflgwl riyhmsqsil qeeavrqrda lerivaqaes
       61 tlrgatpwvg rscsevstsl qaagtlspyf rsiwlvsrgq lycssvirsn aalnmplpad
      121 lvpmltgtrt llvsgtpyvr etpalalyvp tsatdgvlgf vdgiyltetl hsvkssdlaw
      181 tamtvgnval tsegprlesa giatrgaqis ltsehfttsl agspslmrsl agsqapifls
      241 fggivafllg vltfrhfgpa qfmkrqiahg ikrnefkvyy qpvmelatgr cagaealmrw
      301 hhpvaglvrp dafipiaedn gliidltrsl lrqirndvak galpqgfhig inlaerhlrd
      361 ttiihdiery ygtlndtypm vaeiteryvi rdtaaarnvm aelqrrgiet alddfgaenn
      421 sigylkrydf nylkidkefl pvteedvvtr nicdsiihla erldmtivae gvenemqany
      481 lrgrnvtyaq gylfarpiaf delvqyaiah agtgltavkt gapartptts ltprkag
//
LOCUS       WP_257959035             587 aa            linear   BCT 02-MAR-2025
DEFINITION  secretin N-terminal domain-containing protein [Pandoraea
            commovens].
ACCESSION   WP_257959035
VERSION     WP_257959035.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019280.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07655.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..587
                     /product="secretin N-terminal domain-containing protein"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /GO_process="GO:0009297 - pilus assembly [Evidence IEA]"
                     /calculated_mol_wt=61567
     Region          54..581
                     /region_name="pilus_B_mal_scr"
                     /note="type IVB pilus formation outer membrane protein,
                     R64 PilN family; TIGR02520"
                     /db_xref="CDD:274177"
ORIGIN      
        1 mrkhlgvlca itlltacgtp gllsktdenv tevretmrta ndthaataig aiehvdgawl
       61 skksvavnat ialpefftrq vrfstgaplp msvllaqvar ghgltirmas dvacdggass
      121 rdgrggrgea agvaqrfqin ctesgepavp lqyhgslsgl ldtiahrsgt hwsyrdgvvq
      181 faryvtrtfq ikmmpgssty tasvgkasrm kadrgasggg gtssggvdls fnadanvtve
      241 seldywtdlv ktvadmlsps grvtpsvvts slvvtdtadv vervaryves enavlgrqvk
      301 lrvqvysvtl eensaagidw dlvyrsasgf vaglsgpalg galmtrkggl girtipngrl
      361 agssafikal skqgrvstvi dttvvtlnnq papvavtqnr gfvaqtkmtp gnyggqavvt
      421 aeqsvlttgf vmnllptlmd nrsvmlqvqi dmsdlkkldk inlrtgkeap sgsdagasgg
      481 gsgpnvradi dgkgasidig gkdddrrrdd dglgagtfmq lpitasvqtm qraslksgdt
      541 lvlsgfrrkd dsterdgifn yeggtkeanq hvnevvimis peltegv
//
LOCUS       WP_257959143             371 aa            linear   BCT 02-MAR-2025
DEFINITION  type III pantothenate kinase [Pandoraea commovens].
ACCESSION   WP_257959143
VERSION     WP_257959143.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 371)
  AUTHORS   Yang,K., Eyobo,Y., Brand,L.A., Martynowski,D., Tomchick,D.,
            Strauss,E. and Zhang,H.
  TITLE     Crystal structure of a type III pantothenate kinase: insight into
            the mechanism of an essential coenzyme A biosynthetic enzyme
            universally distributed in bacteria
  JOURNAL   J Bacteriol 188 (15), 5532-5540 (2006)
   PUBMED   16855243
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015280.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03309.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..371
                     /product="type III pantothenate kinase"
                     /EC_number="2.7.1.33"
                     /GO_function="GO:0004594 - pantothenate kinase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=37637
     Region          36..344
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 msaprkassa sptpasmqga dgmpaasngg vygsaapwll vdagnsrikw alapavrpah
       61 wraaspsfla sgavdhaewr tlatqiragw salaadtsat sdpdgngsqt ggrhfapnaa
      121 plaigqggqh dgficpapag vwltnvagda aeqavrmtlq tlwgmassdw lqvlrasdar
      181 agvrngyhtp sqlgsdrwas ligahaawpg ehllivtlgt attiealrgd gdylggliap
      241 gpalmlqsla qgtaqlptld atmpsggqaf arstteailr gcaaaqaglv ersyaqleaq
      301 lgapvrcvls ggarhalaqt lalpftehdq lvpaglyeva lhaaessaak atephtpada
      361 srdaghargg v
//
LOCUS       WP_257959195             451 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Pandoraea commovens].
ACCESSION   WP_257959195
VERSION     WP_257959195.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..451
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47955
     Region          17..431
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(31..32,35..36,39,71,131..132,134..136,139,159,
                     162..163,166,259,262..263,266..268,271,299,303,361..362,
                     366,370,385,388..389,392..393,396)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340877"
ORIGIN      
        1 mqpttvghpa agatryrfav falivvialv nyidrgaisy saaqitaeyg fdragwgavl
       61 gyfgygymfg alfggaladr lgakkvwvia giawsafaia miwagdigia vfggsaltgf
      121 atirvlfgfa egpaysiink tmsawaspse rgfavsigll stplgallta pvavgllllt
      181 dswrtmyvvl giagfvlial farvytnrpe enprvnaaev aliqagrpaq ntsaaaaasd
      241 mpwwsffksk tlvfnsigyf afiyvnfmll twtpkylade fhftlsslwy igmipwtgac
      301 vtvllggris dwlyrktgkl viarswfaaa altcttlcfl lvsqaqsvwa vialmtlgna
      361 lnalpnsvyw avvidtaptr vgtfsglmhf ianiasvlap tlagilsaky gyssmfiata
      421 vatavgvfam lqvkpgvgpk ltrregetvs a
//
LOCUS       WP_257959197             305 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Bacillus sp. V3-13].
ACCESSION   WP_257959197
VERSION     WP_257959197.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. V3-13
  ORGANISM  Bacillus sp. V3-13
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Bacillus sp. V3-13"
                     /db_xref="taxon:2053728"
     Protein         1..305
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=32008
     Region          54..300
                     /region_name="PRK06500"
                     /note="SDR family oxidoreductase"
                     /db_xref="CDD:235816"
ORIGIN      
        1 mgampfnavs salaaafffn dkematgidp vdihisvnvy dgfvtlyetg gktmspyygi
       61 kgvivggthg igfatakalv aggaqvmvtg snprkakeaa hefgerarvi ssditsmadi
      121 qllhnevene lgtidflhvn agiallepyq evtedtydri favntkgaff tvqrlaplik
      181 ergsivftss iadeggspgm svygaskaal rslasgfaae llprgirvnv vspgfintpt
      241 lgvtgfsead raafmelgdr itpmkrhgtp eevakavlfl afdatfttga rltvdgglgq
      301 gieam
//
LOCUS       WP_257959199            3251 aa            linear   BCT 02-MAR-2025
DEFINITION  autotransporter-associated beta strand repeat-containing protein
            [Pandoraea commovens].
ACCESSION   WP_257959199
VERSION     WP_257959199.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 3251)
  AUTHORS   Doyle,M.T., Tran,E.N. and Morona,R.
  TITLE     The passenger-associated transport repeat promotes virulence factor
            secretion efficiency and delineates a distinct autotransporter
            subtype
  JOURNAL   Mol Microbiol 97 (2), 315-329 (2015)
   PUBMED   25869731
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024353.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12951.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3251
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..3251
                     /product="autotransporter-associated beta strand
                     repeat-containing protein"
                     /calculated_mol_wt=306234
     Region          77..1773
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          1124..2820
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          2974..3231
                     /region_name="Autotransporter"
                     /note="Autotransporter beta-domain; pfam03797"
                     /db_xref="CDD:461054"
ORIGIN      
        1 msltrvclac ivvlgalapa tswatcttag nivtcsgaan plapsysnaa snlqvtvnss
       61 agvgvllgvg gtalsltgsn vtlvnggtid psllggigll asgtvigngt aggstqtvtn
      121 naimrgtvgv lgvnlpgltg laltvqnatg gtttlnnsgt lgatpilgvt ltgngsapvv
      181 vayggagvnf sntgtilgrv afqpngttgt gntfsnegtl sgsvslgans nntftavtgs
      241 tfndggstgi galpvvgfnl gfaaagvidg gaggtnalvl rnsannattt gtgtlngasy
      301 vnftsatvng gtwtftgpla vtsttlnggl avfdnagsfg tgsltvngga mqaasaglti
      361 alpttlgtng lsvsgtnplt lggvvsgtgs vslggtgsls lsgintysgg tflssgtlva
      421 gsstalgsgt vqvsgttgvl dasapvslan tiaigggstl tlggstaltl sgliggsgsl
      481 akqgaqtvtl tgantfsggv nvvagtlals gagslqiggt plalsgagav fdmsaangdr
      541 tvsglsgvgn tqialgannl tlgssanstf agaiggtggi vktnantqtl sgvntftggt
      601 rinaggitlg aggslastga vsllgggttf disqasaqti galsgiants valgnnaltf
      661 gdatnqtfag aftgsggslv kqgtgvmtlt gtstagggin vragtltlqg aafanatpla
      721 ltgstatldl staanmtfga lsgvagstvl ignqtltvgd agnttfggsi sgtgglvkqg
      781 tgslllsgaq tftggidvaa grlalqgnns lagsnvvtla dgatfdigga gpvsigslig
      841 tansqvtlgs ntlalgdaas qtfagslggt ggivkqgtgt qtltgqnaft gqitinqgtl
      901 alggtgtlsa npmsiasgaa ldisagenqt isalsgavgs tinlgdntls fgdntnrtfa
      961 gtltgtgggi vkfgtgtqti taqqtftgsv vvgggslvig aggglsaqna vtlgdsstsl
     1021 disaagpqti gslsggtaqv qlgantltfg dntgetfngs ihgtgglikq gggvqtlgga
     1081 sdfsggvtln agglqlsnas algtgaltls dqttldttqa ltlannitlg gtsavlgsad
     1141 ltltgavtgn galqkagaat ltlagaggwt ggttindgvl algsggslas qgavvlggpt
     1201 atfdisgaaa pltigalsgt ggtlalgntt ltfgdatdqt laatitgtgg lvkqgagkqt
     1261 itttqmymga iaiadgtlal gggaalqagn alwlkgansv fdisggaast lgtldgvtgs
     1321 aislgaqtlt ltnfrdatyn gaihgtgalv vsgssvqtls gasdfsggvr vgsgglvvgn
     1381 dlamgtgaat fgnnvtldst qavtlgnsat llgtltvlgs hdltlngals gsggitklgg
     1441 atltlggsnt yagattinag rlalgagasl natgsvsvag gatldlsagn gtqvigaidg
     1501 agtvnigalv teiggagndt fsggltgtgs vvkigagtet ltgqnsytgg tviqagtlal
     1561 ggagtlatng avtlsnagst fdisgangpl tigglsadag tqirlgintl tfgdatthtv
     1621 aavisgagnl vkqgsgattl lgtqlytgtt titdgtlalg avaslapgas vsltgtgavl
     1681 dlsaagnqsl ghlygtggsv vlgggssltv gnndsdtlas aisgtgalim dgsgrltlga
     1741 qntftgnvsv nngtlaldan gtlsnannvt vasgatfdvs aattpvigal sgiagstvdf
     1801 gtqtltlgst nnaifsgaln gtgglikqgs gtqtlngsva ltsdvridag tlalsngtql
     1861 ggksanlnga tavldlstgp nqtaatvsgv agsalnlggt tltladaags alasdihgag
     1921 gslvklgsgv qtlsgnsdft ggvdvqaggi svgsntalgt gtvnfsdgts idatqastlg
     1981 nqitlggnlt vvgtndltln gaisgaggit kngaatltln gqntyagath vnagtlalga
     2041 gaslnaagvv dvqtgatfdl sagngtqtfg altgggnvnm gsntlevgas glnetysggv
     2101 mgtgslvkvg tgvetmtgsn tftggtvvqa gtlalggagt lssngavtlq nagatldisg
     2161 angnraigal taqagtnvtl gsntlafgda sshtvsgtis gtggivkqgs gtqtllgqqq
     2221 ftgtttvadg tlalgatgrl anganvaitg anatfdiaaa gnqtlatlag tggtvnvggn
     2281 tltfgdathq tlgagiagtg givkagagtq tltgqstftg gidvaggtla lgaggalgga
     2341 ndvtlaggta ldlsgattpv tvrgldgaan ttvslggqsl tlggaannaf dgsitgtggi
     2401 tkqgsgtvtl ggnntfsgqt tvsggtlklg asgrlgntsg islgnagstl dasattaplv
     2461 latlnggtgt qvilgsgglt tgdtgnhvfd gtlsgagglv ksgsgslslg aantftggtt
     2521 lnagtltvgn raslgtggla vngsgalnas apatlangit lnngstlsvg gtaaltlggs
     2581 isgngglsln npqgvtlgga ntftggttvn gggvtltspg glgtggltva qgsvttqgvn
     2641 vtlpslngtt qggltinggs vsvatgnfpg svsgtggltk tgggtltlga qnpltgpttv
     2701 aggtlgiggl pnspvtvqtg atlttpapvs aggsgagaqt gpltgasgsq ivisapgstl
     2761 svggnltlap sstlqvnaap gtapsqvstt gsatvggsnl vvnaapgtqp adasgavvvs
     2821 atggvsgqfa ststnllylt pqvsytptsv lltfapngtp lpagavtpnq rvvaaavasl
     2881 gtgsalyqaa lgltaatapa afesldgslh asvasmllgq sqiardavsq rlrdslslal
     2941 ecntaasgde ragnrmtspd qrddcrsqpr atqawasvyg ndgqmrnrsv adggsgaatl
     3001 hrrgmgmlvg vdapfadawr ggmfgglghs tfntgasasg nsndaqigay vnrrfgrlga
     3061 tvggaygwqq istqraiaig pvaqtaraky daavwqvfge aawrldagrv vepfanvayt
     3121 rvrtdafdes gsiaglhade qshgitfstv glrgeipfat gtglaasgrl rlsagwrhay
     3181 ganapdmqla fsgtsaaftv ggvpiardaa vvsagidafv sdavtlgvsy tgqfggkvsd
     3241 nsvygnvnwr f
//
LOCUS       WP_257959210             402 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Pandoraea commovens].
ACCESSION   WP_257959210
VERSION     WP_257959210.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024831.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13439.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..402
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=45095
     Region          3..334
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mkilytnfhv gcgggqdtyv relalamsrd heitvatppg swlgeqikrl pritsvdidf
       61 kprwyrfwqe tlrlrrlire hrfdvvhvng spdhrqvmla vagltvrpei vftkhntypv
      121 nsfgnwlras fgtsrtiavs dyvrtmlrre ssypnivvik hgvrspgael lneeerlrrr
      181 sallgasadd sivlgsaagt gaakgwadlv valtllpeat rqrfrvwlag tepsieqram
      241 veecgldaqi lftgpinhvh hllaatdvaf vlsyheslsy acreamaagc aslvtkvggl
      301 penvtpwvdg wivpprdpqa ianvlmhiad kpermrhmgh marmkgrtef dfddfvgaty
      361 gvyldataar vrsqpptran lsmrqwlria lrrqrrnqkr aa
//
LOCUS       WP_257959198             427 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Pandoraea commovens].
ACCESSION   WP_257959198
VERSION     WP_257959198.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..427
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45201
     Region          22..421
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(32..33,36..37,40,78,136..137,139..141,144,163,
                     166..167,170,249,252..253,256..258,261,288,292,345..346,
                     350,354,370,373..374,377..378,381)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340926"
ORIGIN      
        1 mnnaslamsa dakpatpawr viaaatigna lewfdlvvyg ffavtisrlf fpagdstvsl
       61 lltlgtfgvs ffmrplgaiv lgvyadkagr kaaltlsitl mmagtliigl mptyasigvl
      121 apiglvlarm iqgfsaggey gsataylaeq apsrrgfyas wqsssqgmtt llasvfgavl
      181 tsslsdaqmq swgwripflf gltigpvayy irthmdetpe fvaaettqsp ladtfssqke
      241 rlllaigvvv latvsaylil fmptyavkql gvsastvfta iiatgviqtv gapivghlsd
      301 khgrtgmmlg aavvflllsw pafyvldlha tfgtmmamqi giglvsvayy ggmpallsel
      361 fptqtrttgm siaynlavti fggfapfiit wliqvtgskl apsfylmgaa vismmallri
      421 ralklrl
//
LOCUS       WP_257959224             299 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Pandoraea
            commovens].
ACCESSION   WP_257959224
VERSION     WP_257959224.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 299)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..299
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=32549
     Region          9..274
                     /region_name="PRK11139"
                     /note="DNA-binding transcriptional activator GcvA;
                     Provisional"
                     /db_xref="CDD:182990"
ORIGIN      
        1 mnaeprarpp lanletvclv arhgsftaaa easglthgai srrvgavenw lgcalferhg
       61 rgvsltcdgq rflgriehaf dvidaaadqw hqarkapavr lsvvpsfakl wllerlqsle
      121 agkpfidihv ttehrnadvg agevdialry grggwasvds eplmgetlyp vaspeiaqrl
      181 kgasvsemla mpllhdsdlt gwrawcgahg vslrprardr rfedytvvla aaeaglgial
      241 araplasewm arsrlvrlsd aevvcplqyh vvtakrekrp evleviarlh alaredart
//
LOCUS       WP_257959244            2683 aa            linear   BCT 02-MAR-2025
DEFINITION  hemagglutinin repeat-containing protein [Pandoraea commovens].
ACCESSION   WP_257959244
VERSION     WP_257959244.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024728.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13332.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2683
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..2683
                     /product="hemagglutinin repeat-containing protein"
                     /calculated_mol_wt=273918
     Region          50..1683
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          50..304
                     /region_name="TPS"
                     /note="TPS secretion domain; pfam05860"
                     /db_xref="CDD:461762"
     Region          306..324
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          326..344
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          346..383
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          385..406
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          408..427
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          429..449
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          452..470
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          472..491
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          494..513
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          515..534
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          539..557
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          559..580
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          582..599
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          602..622
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          624..644
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          646..664
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          684..703
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          706..724
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          726..744
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          746..765
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          767..783
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          804..824
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          826..859
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          861..879
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1369..1387
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1389..1406
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1408..1427
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1429..1453
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1456..1473
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1475..1494
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1509..1528
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1700..1848
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          1950..2105
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
ORIGIN      
        1 mnahvngqgr ngvrgsrgeg glqramvral vlaqviapva araqvvavpg angpgvvqta
       61 nglqqvnita ptaagvsknv ysqfdvprqg vilnnsstlv ntqqagyvng npnlardqaa
      121 rvilnqvnsq spsqlrgyle vagkaaqvvv ansagilvdg ggfinttrgv lttgtpimgs
      181 dgsltgyqvn ggrlviqgdg lnaqnvdqvd lisravqvna alhakqlnvv tgtnrvdher
      241 lsvqktaada dapdvaldvg qlggmyaqri flqgtengvg vsnrgviaaq agdltltteg
      301 klvntgqtla sgamtmaara ldntggtlva erldvtldga lvnrqgsisa aastitaaal
      361 dndhgrlhad alsltvsgda snrsgeikqf gasdqtirvg galdntggtm atnagslald
      421 vgqmtndsgt vshlgdgqfa ltssgvisnr nglvgtlgvl rttaawldna ggelsaadsv
      481 qvstaadfin rdggvvfgak glsvsaggdi dntsgsmqst gdvrvsasga ltnsggrvsa
      541 ngahdrltvs aqtidnasgq ianagdgdte vvaattvdnt ggtlggngrl sidaasvanv
      601 aggkvvgggd valgirdald ntggqvfgga sltmtqggar vtntdgvmes rgdvamqlas
      661 ldntrgivrs nrdvvvggam tgagqmtagr dltvaasgdy vnasmnrlra dgaltvtstg
      721 rfvndgvlea pgtlnvravq ivnnagglin aattqlsadg llsnegnigg dtvrlkantf
      781 nnvygvlgnd vqvdaadvdn agpsaimgat rrlavyasna vvnrdgally smgdieiard
      841 gvrdatgmla nqssqltnss asivadghld iaarvvdnkr tsivtqagtp qsetktfglw
      901 tagliggdet lwhdsktfpe wkwnaghapi ssmllerlal pvtvelpkse vtnldmaakt
      961 fsltrpiiet ysdattqgqg pcddhgncad giktrevatq avqyfngivd tgstyritfw
     1021 pdwnpstmir pdeaisrgdl gidqrdynel krvvtttrtr delvsasaeg klqaqgtiri
     1081 nadggeirnr sslmtaggdl irraqggavr degialqerv eqsqvstfyw hqksggdseq
     1141 ldvaypvmpl ppttvaslpa iavgnqtvet sgqtitvssv drngntvgst gvtggngsgs
     1201 alitlpggip gltlpgsply qlrpapeqty lvatdprftq ygkfissdym ldalgldpqk
     1261 tqkrlgdgfy etqlvrdqit altgrtllgg nadylaqyta llgngvaygk qfdlsvgvgl
     1321 sdvqmqqltt dlvwlvsqdi tlpdgsvqsv lvpkvylaqa ntvdlastga lvgggsvkla
     1381 atgdvqnsgr ivsdtattvl gdaivnfgsl gsrgttalts lgdirntggr idgqdvvvra
     1441 grdlinestt ltqtagtdad gfasrasats igsvglisas nsatlvanrd vtlnagaias
     1501 dgsvtvaagr diqlntlavg qsqtvgtrdg knggsdvvtq hvgsaissgg nlttvsgrdt
     1561 tlnaatlsag envtviagnd vsvnavkdvy thdarshggt lkfvdstlde svrgtqvvag
     1621 nnvivgagqt avagellgah avtpvaqtsg tgnltilgst vashgagtaa laatgdvtig
     1681 avsethdsyr wqhnsssgfl skseetsemr shqtvavgst vsadtvgata grdlsvigst
     1741 mvgtqdvalq agrdlrieta envsesssfh ekkhsglgss ggvgisygkn eqqhrtndss
     1801 vthtgslvgs ldgnvslvag rdlsvrgsdv maggdvtgig qnvsiesvvn rvhhdeahey
     1861 kssgftlalk spvidavqnv tsqvnaavds ggdarvsalr gyaaasgayg avgeagklld
     1921 tldagktpea kvelswgsss skstssldst qnvasqikag gtaafiatgd aasgkgnvnv
     1981 igstidakdv llqatnqvnl rhstdtestr senesksgsv gvsvgtggvg vsasasrgng
     2041 dansdsifqn nthinashta vivsggdtnv vganvnadkv iarvggdlni asvqdasess
     2101 ahqqsmsggl nlsqggasgs fsysrgnasa nyagvveqsg iqagaggfdv dvagntdlkg
     2161 ayiastaeas knqlttgtlt fsdienhsey sansfgfggg fsianggtet kktgpksgtn
     2221 kggispmlpq sesgneratt ysgvsegtit ltdganqkqd laslkrdttd lngtvsrtpd
     2281 lqellndqsr lmsaataage avardigtya skkedearkl aekttdpelk aqyeqeaenw
     2341 keggdyralm haaggaivag lgggnalgga lgagatsklg dtlnklsaei qnsrptgnad
     2401 vdealaqiva tgigtavgaa vggssgaftg fntdrfnrql yteygaderv lakhlaeksn
     2461 grytqseved qlrlmgvskd gegyvpvgla eelngrrprd pgarwtntgi mnengtelvv
     2521 qslpqpnyal qayimanygt alpgqvpssf dyeptpvkmd lrggvayvgd giatnagrta
     2581 alataiatfp spitrpfalv ayvatgtela anamvqfarp dvgqylvsgt asivvdrlsw
     2641 klpvaspifn etsnylnsqg ffkpvedkin rvwgdvenma vkk
//
LOCUS       WP_257959270             493 aa            linear   BCT 02-MAR-2025
DEFINITION  histidine-type phosphatase [Pandoraea commovens].
ACCESSION   WP_257959270
VERSION     WP_257959270.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 493)
  AUTHORS   Rigden,D.J.
  TITLE     The histidine phosphatase superfamily: structure and function
  JOURNAL   Biochem J 409 (2), 333-348 (2008)
   PUBMED   18092946
REFERENCE   2  (residues 1 to 493)
  AUTHORS   Kostrewa,D., Wyss,M., D'Arcy,A. and van Loon,A.P.
  TITLE     Crystal structure of Aspergillus niger pH 2.5 acid phosphatase at
            2. 4 A resolution
  JOURNAL   J Mol Biol 288 (5), 965-974 (1999)
   PUBMED   10329192
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012548.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00328.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..493
                     /product="histidine-type phosphatase"
                     /calculated_mol_wt=52574
     Region          61..489
                     /region_name="HP"
                     /note="Histidine phosphatase domain found in a
                     functionally diverse set of proteins, mostly phosphatases;
                     contains a His residue which is phosphorylated during the
                     reaction; cl11399"
                     /db_xref="CDD:472174"
     Site            order(90..91,94,166,384..385)
                     /site_type="active"
                     /note="catalytic core [active]"
                     /db_xref="CDD:132717"
ORIGIN      
        1 mtaamtrvmt repvrspdvs ndsvpvrrwl rrngarwqar iaaltvvgal sacttpapqq
       61 pgpakppesa aridgmpadw tlvstvivsr hgvrspthah ppldklspda wpgwpvpagy
      121 ltarggslse rmgryygdwl rarrvlpena cpspgavygw adidqrtres gnallqgiap
      181 gcdmrtshqt dlttydavfq pvaagdcpld pgaargaies rlapegvsgl nkrysatlar
      241 mgevldyahs pacgapggck leevptrlrv egdgsgvtlr galgsaakas evfllqageg
      301 lpdnqvawgr irddkdwall leahnaqrdl lnktpylatt ngtpllatvl daltraeats
      361 atptpavrgp alptgnrvfv ltghdtnlan lagmlkldwq lpdqpdntpp dgalvfslwr
      421 npagerfvrv elvyqsmqql rqltslslde pakrvalvlp dcsdgpdaka crwpafsqrv
      481 ksalspacla gvq
//
LOCUS       WP_257959274             459 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Pandoraea commovens].
ACCESSION   WP_257959274
VERSION     WP_257959274.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..459
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=48308
     Region          5..401
                     /region_name="2A0115"
                     /note="benzoate transport; TIGR00895"
                     /db_xref="CDD:273327"
ORIGIN      
        1 mrhidvhhla dearfngyhg rillwcalii ifdgydlava gialpsimka mnvdatsagf
       61 mvssalfgmm fgaivmgmva dsigrrkaia icvlmfslft aaaglthepi sfsvtrflag
      121 vgiggvmpiv vaqmteyspr rlrgtlvtlm fsgysvggml aallgkglie sygwqsvfla
      181 asvpallvpf amkalpesmp flirngrldt lkqvlarlsp dyvaqpsdqf alpgtdrkqa
      241 aplsrlfqdg rgfstvmlwv affmclfmvy alsswlaklm asagyslgsa ltfvlvlnfg
      301 amlgaigggw ladrfnikyv lvgmyalaav sitllgvkvp tpvlfvlvgl agastigtqi
      361 vtyayagqfy pmaarstgig wasgvgrsga ilapivigvl vsmslplqqn fmaiaipavi
      421 aviavllidh kksasvqqqa amqsqghstg langagepa
//
LOCUS       WP_257959508             455 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Pandoraea commovens].
ACCESSION   WP_257959508
VERSION     WP_257959508.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..455
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47284
     Region          7..405
                     /region_name="2A0115"
                     /note="benzoate transport; TIGR00895"
                     /db_xref="CDD:273327"
ORIGIN      
        1 mpqpsidlra liderpfghy qifvtalcgl ivfldgfdtq aigyvapaiv halgidrsal
       61 spvfsaslvg ltlgalvggp vsdrvgrrpv liagmlifga mslatafass vtsllvlrll
      121 tgiglgcvmp naialtgefa pervrstaim vmfcgfslga algglaaagl irdygwpsvf
      181 ivggllplaa allawrhlpe sprflivqak hparllavlr klapdlpedv ridsgadvha
      241 kghvsvsalf adkraritvl lwviffmslm dlyflsswlp tvihdagial dtaaiitsml
      301 qiggtlgtlt lgrvfdrvpp fkalgvvylg aavcvvlvgl agtsvavlta tifgagfcvv
      361 ggqiganala artypttirg tgvgwalgig rigsivgpiv ggvllalhwd pqhlfmmaav
      421 pvtiagvaaf tisafvqrea rlearrvart asdai
//
LOCUS       WP_257959552            1983 aa            linear   BCT 02-MAR-2025
DEFINITION  autotransporter domain-containing protein [Pandoraea commovens].
ACCESSION   WP_257959552
VERSION     WP_257959552.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 1983)
  AUTHORS   Oomen,C.J., van Ulsen,P., van Gelder,P., Feijen,M., Tommassen,J.
            and Gros,P.
  TITLE     Structure of the translocator domain of a bacterial autotransporter
  JOURNAL   EMBO J 23 (6), 1257-1266 (2004)
   PUBMED   15014442
REFERENCE   2  (residues 1 to 1983)
  AUTHORS   Veiga,E., Sugawara,E., Nikaido,H., de Lorenzo,V. and Fernandez,L.A.
  TITLE     Export of autotransported proteins proceeds through an oligomeric
            ring shaped by C-terminal domains
  JOURNAL   EMBO J 21 (9), 2122-2131 (2002)
   PUBMED   11980709
REFERENCE   3  (residues 1 to 1983)
  AUTHORS   Henderson,I.R., Navarro-Garcia,F. and Nataro,J.P.
  TITLE     The great escape: structure and function of the autotransporter
            proteins
  JOURNAL   Trends Microbiol 6 (9), 370-378 (1998)
   PUBMED   9778731
REFERENCE   4  (residues 1 to 1983)
  AUTHORS   Pohlner,J., Halter,R., Beyreuther,K. and Meyer,T.F.
  TITLE     Gene structure and extracellular secretion of Neisseria gonorrhoeae
            IgA protease
  JOURNAL   Nature 325 (6103), 458-462 (1987)
   PUBMED   3027577
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015737.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03797.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1983
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..1983
                     /product="autotransporter domain-containing protein"
                     /calculated_mol_wt=197454
     Region          1..>32
                     /region_name="ESPR"
                     /note="Extended Signal Peptide of Type V secretion system;
                     pfam13018"
                     /db_xref="CDD:463773"
     Region          104..1656
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          1707..1963
                     /region_name="Autotransporter"
                     /note="Autotransporter beta-domain; pfam03797"
                     /db_xref="CDD:461054"
ORIGIN      
        1 mnhiyrvvws aslgmyqvas evasghggks rsvdrrrark aaavaavava smnagavfav
       61 papvatmdgv tqlfsgspdt itspnwafdg tnltisgslp atfatitggl gtisnagsms
      121 gayalsfsaa anvslventg sinagsnsgs ynsgvigtfv nrgsvttgtf agignggqmt
      181 rfentgtitg ffqglnnqgt lteainsgsi aatagygvln qsqlgtlnns grisgifgva
      241 avkgsapnpl lgtlrnsgti tgtekgisnn gtaittienl vggqiagtdt iigiglsnas
      301 avsgtdyrgt igainnagti sgglygiynt dsigtinnla sglitgptaa isnqstdami
      361 gqinnagtia gsilyygsqa lsiagaagta fgtltgfggs vvgtlaspla dvhftggnll
      421 lndmvdlgna rtafndasvl qvnqptyifg nyaqganatl qlgvgngavt tgnvgldagy
      481 gylkvtgntt vapgstialq slgynfaagq rfvaidtvga atynegtqry vvngypylsg
      541 sgaslpvsgh qylvvtvtap fvgamggtdt lvagtpsssp nwaydgtnls iagtsfatit
      601 gnmgtlsnsg tltgayalst spggniglve ndgviaatsn tssglynggt igtlvnrgsv
      661 staayggvsn ggtitrfens gtvtgalqgl nnsntltsvf nsgtiqaana ygvlnsaqlg
      721 altntglisg yyglissktg lanaalgtlt nsgtitgsnk gvlnsnaylg tldnqvggqi
      781 latggltadv aavsnvasst igliknagmi wgtyygiynd aavgtinnla ggvikgigga
      841 isnqaptasi gqinnagtia gwiinrsqnn lyisgatdgt fgtltgfgpt ysstivstna
      901 dvhfnggklv vddhfdlant rtayndssvl qinnvlrvag nysqaaagtl qigvangala
      961 tgsmltdvgy grllvsgnty iapgssialq slgynfaagq ryvvidtags aiynegtlry
     1021 avngypslaa sgakvgngsn tdlvvtifap anigtiagtw pltpgtatgt pdwaydganl
     1081 tisgttygsi ngslgtltnn gtltgtsals vgtnggsidr vennglihaa gatdsaiyng
     1141 gvigtllnkn tllsanmagv nsvtaltrle nsgqitggrf gvinagvlts vvntgtisaa
     1201 ptastivgla ntgqigsinn sglisgytgl mllpsgnvsp rttldtltns gtvvgqfagv
     1261 gnyggsigti nnlaggsika tdtsystgin ndwgtangvs tggtigqinn agtltagyyg
     1321 iynansigvi nnlsgglitg lggaisnqsv sssigqinna gtiagwiinr spndlriaga
     1381 tdgtfgtits fgptyggtiv stnadvrfng gnlvvgnnfd lagtrtayne asvlqinkai
     1441 qvsgnyaqsa gatlqigvas navttgdpat dsgygrlvvs gnttlaagss valqslgynf
     1501 aagqryvvid tagtanynas slvyrvngst tldasgaeva ngshknlvvt langtganng
     1561 sgngginngg ntgnsgnsgn aggtgsnpea gngnngglpa fdprtnatia sapnatsalr
     1621 gllgytgvsd pqllnlfnat lgslsdrsad sanrvgkqla paqnaraaga atfgsmnlvn
     1681 shvnglrvaq aggtgvatgd saanwgvwgq afgghssqna renvdgysan yggllvgadr
     1741 afgdrvragg afqfsrtvin ndgstsgnqt svngygligy aaytgepwyv nltgsvvlqr
     1801 ynstrlvsmq gfsgaangnf ngqqyatsae fgwplalgra ivtplasity sylnqnsyte
     1861 tggngtalsv gsagsssvrs algakiampf etssgtwtpe lglrwvheyn rtrqttgasf
     1921 aadptgqtgf ttvgatpvsd laemslgvtl mrannlsasv rydlqvgsgf vshtgivrvq
     1981 qrf
//
LOCUS       WP_257959556            1483 aa            linear   BCT 02-MAR-2025
DEFINITION  dermonecrotic toxin domain-containing protein [Pandoraea
            commovens].
ACCESSION   WP_257959556
VERSION     WP_257959556.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 1483)
  AUTHORS   Kitadokoro,K., Kamitani,S., Miyazawa,M., Hanajima-Ozawa,M.,
            Fukui,A., Miyake,M. and Horiguchi,Y.
  TITLE     Crystal structures reveal a thiol protease-like catalytic triad in
            the C-terminal region of Pasteurella multocida toxin
  JOURNAL   Proc Natl Acad Sci U S A 104 (12), 5139-5144 (2007)
   PUBMED   17360394
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042510.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20178.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1483
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..1483
                     /product="dermonecrotic toxin domain-containing protein"
                     /calculated_mol_wt=162284
     Region          1308..1458
                     /region_name="peptidase_C58-like"
                     /note="C58 peptidase domain and and similar domains;
                     cl41758"
                     /db_xref="CDD:477762"
ORIGIN      
        1 mnqrvsfddl salnddivyr farlfddqpl lgsyvlaclp aqirhrlpwe sveviveral
       61 sesslrslsr sldranvktp esarhgsawg kyftlwreqi igwahafrwa gsghtcgvsd
      121 prtmqayata psprtptlnf gqsgwtgfav amlygsaigh slsrvppigp rpilgwpitp
      181 ivsaerigsc aalapeaast pgnadiptsd afdvnglsla iheawqwlsd ttmdmtersl
      241 nafdafdafd afdafdalmp rdplrfsgal aeslvspdps apaapsvpdn rpaefaiakw
      301 repepvaaan qrdffsmspg ldqltiaans whnrgsehrs lhvkfdrlmn fspppteael
      361 fnatisaepd fpsvdqpdiv lrrhkpvpgs trlldvtywk lfdaarmira gsldidnppe
      421 gvyfdvcqrs phgaiqgnpt lvsaerfrav vthwtekcdd qakqtwsipe slpgqldatl
      481 ttgsqialal sdltlayrqg liphraltmv rdvlsqssqf hmlgsrstsr rlivkltqds
      541 rkqtlvpagt fviferpqgg ltllylmgdg qawrafaspe klaeatetna gglrdtller
      601 lprsvggagl adappialsp vpladpmrma nratldlira eaplkamavt tgarirqytd
      661 wlsgastsav edaletarre rvdaglpasr hsavislaqi dsirhiqvlr aqlstampdv
      721 hrmaqdfars vldraglsnt dpdtlyvrie gspapisvta sllyklrvpd atatgpllrr
      781 spegalrpet qdwasdspfp daaaivskla dgppeksiyd alenfwstsr ntvrqvlkse
      841 fiaqawlqra sgvlsvearh laariagpid lnrfyemqls hevvspkvkr ewlhvkgrns
      901 tlmavcaegr pavlliaayp dgprvhgfes rtkledwfqq qtadddtrrq lassfsppsl
      961 ddewlvdakl dasgqavpse pdtftlltsv yeaqsphggw ahehiprrra llkamdylak
     1021 ldlavgfasw alpavqpvga aismvdfsvg vvgegvallt gdaklhsqaw qsmvsavvaq
     1081 gavvsrfpal alftgsrrfn yyvsqppvvg eelilglhra egrmyaaids strayvefds
     1141 tvghfrlipp ggssaaasda pfmrlgsegr whvatsadll qpvleeqtvg wridqnfler
     1201 ydgwrnrhdp lfenamrays dtvsqrsspv dvtvsdlrll klqfidrtir speelgtlag
     1261 rinelqnavd aaatisvarl psqareigal yvpitqrfrh ylshlrtgll rasavaayyg
     1321 raesvanqfn ayaqlspsas elfaedlavl gigdipylpp ppnlvtdarf etmlegaqdt
     1381 trlfeitags rtlllgrrls stgnsqyvfm dpavgivths drealtnlvn thlhdvasey
     1441 eiplneggny aievaeidar tlgdmplfrd idlyvpvrea fri
//
LOCUS       WP_257959668             553 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Pandoraea commovens].
ACCESSION   WP_257959668
VERSION     WP_257959668.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 553)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..553
                     /product="AMP-binding protein"
                     /calculated_mol_wt=60398
     Region          60..539
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(195,198..203,205..206)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341277"
     Site            order(198,315..316,337..342,422,434,437,448,531)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341277"
     Site            order(198,238..239,287,289..290,293,315..316,337..342,422,
                     434,437,445..448,512)
                     /site_type="active"
                     /db_xref="CDD:341277"
     Site            order(238,289..290,293,315,445..447,506,512)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341277"
ORIGIN      
        1 mtadyaqaye afdldatvra tldgnldamn acveccdrha lpgrialfwe gkdgtsqtwt
       61 fkvlqtlsar fanflreqgv qpgdrvsgll prtpelliti lgtwragavy qplftafgpk
      121 aiehrlqsaq sklvitdatn rakldevanc ppvatvggpr gqgvrrgdfs fwhevehhde
      181 vfdpvmrrgd dpfmmmftsg ttgaakpvmv plraimafmg ymrdavdlrt tdtfwniadp
      241 gwayglyyav tgplamgipt tfydgpftve styriinklg itnlagspta frlliaggek
      301 aaapvkgrlr avssagepln pevirwfaeh lgvtihdhyg qtelgmvvcn hhalshpvqs
      361 gaagfaspgh rvvvlddegr ecpvgqpgvl aldrkqsplm wfggyweret pafmgdyyls
      421 gdtvernadg sisfvgrndd vitsagyrig pfdvesalie hpavvetavv gkpdpertel
      481 vkafvvlhaq fapsdalare lqehvrhrls thayprevef vtelpktpsg klqrfilrnq
      541 eiakaaqasa naa
//
LOCUS       WP_257959700             260 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Pandoraea
            commovens].
ACCESSION   WP_257959700
VERSION     WP_257959700.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 260)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 260)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 260)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 260)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..260
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=27707
     Region          7..258
                     /region_name="PRK10575"
                     /note="Fe3+-hydroxamate ABC transporter ATP-binding
                     protein FhuC"
                     /db_xref="CDD:182561"
ORIGIN      
        1 mtdipmfalq dvsfsvegrt llapltlela agqvhgligh ngsgksslik llarqlqpvs
       61 gniafegral aswgarefar rvaylpqqpp aaagmtvsel valgrypwhg algrfdahdh
      121 qavqnamaqt dvlgfadrlv eslsggerqr vwlamlvaqq arcllldept saldvahqld
      181 llklvrelad ahglgvvivl hdvnmaarfc dtllalkqgk piargtpael mspdtlqtiy
      241 gvpmgvlpnp dggmpvsyar
//
LOCUS       WP_257959723             457 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Pandoraea commovens].
ACCESSION   WP_257959723
VERSION     WP_257959723.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..457
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=48772
     Region          21..414
                     /region_name="2A0115"
                     /note="benzoate transport; TIGR00895"
                     /db_xref="CDD:273327"
ORIGIN      
        1 mqmqsievsr vsaaqrlerl pvcgyhrwlf lvislafffd nidlatmafl lgsikadfal
       61 tnvqagmigs asfvgmaiga icsgvaadrf grkpvfqism lvwgagsalc alapgpvalg
      121 acrvllgigm gmelplaqtl lsefiptkkr gkylalmdgn wplaficagl lsyailaqhs
      181 wrvlfaleaa palflfavrr yvpesarwle sqgryaeade vvaniersvm rrlgldtlps
      241 isptpvepva ggrglrviws anyrvrtlvv gglwffallg fyglntwlga lqqaagiavt
      301 ksvlftvyis lggipgflaa awaverigrk ltcvatlvgg aiatyvfgql lqiaaaewai
      361 yaagacmqff sfgmwavlya ytpelfpsra ratgcgyasl cgrigallgp tfvgaivtws
      421 tsdavflfsa tcfgiaaacv wcfgvetrgs qletvst
//
LOCUS       WP_257959744             324 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Pandoraea
            commovens].
ACCESSION   WP_257959744
VERSION     WP_257959744.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 324)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..324
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=35720
     Region          11..>181
                     /region_name="PRK11242"
                     /note="DNA-binding transcriptional regulator CynR;
                     Provisional"
                     /db_xref="CDD:183051"
     Region          97..297
                     /region_name="PBP2_LTTR_like_1"
                     /note="The C-terminal substrate binding domain of an
                     uncharacterized LysR-type transcriptional regulator,
                     contains the type 2 periplasmic binding fold; cd08421"
                     /db_xref="CDD:176113"
     Site            order(112..113,115..116,119,123,125..131,223..228,
                     234..235,237..238)
                     /site_type="other"
                     /note="putative dimerization interface [polypeptide
                     binding]"
                     /db_xref="CDD:176113"
ORIGIN      
        1 malwridlvs lrlfvavcee ssiaraaere fiapsavskr indleslvgs allqrhkwgv
       61 ratpageall hharnvlrsl ekmqgdlsey tsgvrghiri fanvssivet lpdelgaflr
      121 rhegvkvdle ehtsaqvvrg vadgatdigi cwdavdtrdv evfpyrhdqi vtvlhrdhpl
      181 acveqlafie tldfdqigvh pdsamytvfr rlaaeqgktv kfrihvstfe avcrmvraql
      241 glaiapreav giysqvpdge alrivpltdp waerrlvvcv rrydalpvas rmlvdhlcar
      301 nvtgtaegte laddcgsaeg aert
//
LOCUS       WP_257959745             681 aa            linear   BCT 02-MAR-2025
DEFINITION  aconitase family protein [Pandoraea commovens].
ACCESSION   WP_257959745
VERSION     WP_257959745.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012550.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00330.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..681
                     /product="aconitase family protein"
                     /calculated_mol_wt=71929
     Region          40..193
                     /region_name="Aconitase_swivel"
                     /note="Aconitase swivel domain. Aconitase (aconitate
                     hydratase) catalyzes the reversible isomerization of
                     citrate and isocitrate as part of the TCA cycle. This is
                     the aconitase swivel domain, which undergoes swivelling
                     conformational change in the enzyme...; cl00215"
                     /db_xref="CDD:469664"
     Site            106..108
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238809"
     Region          204..643
                     /region_name="LeuC"
                     /note="Homoaconitase/3-isopropylmalate dehydratase large
                     subunit [Amino acid transport and metabolism]; COG0065"
                     /db_xref="CDD:439835"
ORIGIN      
        1 mqatvrlngr vlwlsasaea mtrqlrgetl traeagtlrd qistdemtpa raclafdesl
       61 gdyvyvglrc hddssdatgv fpvtqkavre ggfalsvagl rrgkgssrea spfaercagi
      121 riviaesfer iyaqncqnlg llmstdltla erlqdgetip ieafledcdp laeaivrsgg
      181 lfgytqrrlc gellppqpah apgamtygek iiaralgvar vragdavfvp adwrfsheyv
      241 tpmavsflrh aygneipvlr dvdsvlcfed hlthldavsa dgsrppqivd aarrfgtvqr
      301 efcaqhglrl hgraaaggse gichalmler yalpgqvivg tdshtphcga igafafgvga
      361 temanawltg darlavpgtc lvhlrarlpa gvgakdlalh llhlpyirdg raigqiiefa
      421 geavahlstd eratltnmva eiggltglvv pdaetvrylr errgidftld awmksdpqas
      481 yahvieidca slgamvaspg dpgngialad lsaevaidia yggsctgskr ddlrachdvl
      541 awgltqghrv adgvrfylqy gsedvrawce aqgyadvfka agvtmlspgc gacvnagpgv
      601 sktsdevvis aqnrnfpgrs gpgqmwlgsp atvaasalag yivgfdqlqr dgftshpvsh
      661 paalaapgrg ssgashagrg g
//
LOCUS       WP_257959777             132 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Pandoraea
            commovens].
ACCESSION   WP_257959777
VERSION     WP_257959777.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..132
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=14084
     Region          <9..107
                     /region_name="RpoE"
                     /note="DNA-directed RNA polymerase specialized sigma
                     subunit, sigma24 family [Transcription]; COG1595"
                     /db_xref="CDD:441203"
     Region          <64..125
                     /region_name="CitB"
                     /note="DNA-binding response regulator, NarL/FixJ family,
                     contains REC and HTH domains [Signal transduction
                     mechanisms, Transcription]; COG2197"
                     /db_xref="CDD:441799"
ORIGIN      
        1 mklesgrgra vtraasdagw rdagrtgkat gegarhdppr alhrrprars esdardndar
       61 hcslsvrene vfhmlvdgla vnevahalhl sertvashva hildklalgd saeligyair
      121 hglidegseg va
//
LOCUS       WP_257959778            1241 aa            linear   BCT 02-MAR-2025
DEFINITION  dermonecrotic toxin domain-containing protein [Pandoraea
            commovens].
ACCESSION   WP_257959778
VERSION     WP_257959778.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 1241)
  AUTHORS   Kitadokoro,K., Kamitani,S., Miyazawa,M., Hanajima-Ozawa,M.,
            Fukui,A., Miyake,M. and Horiguchi,Y.
  TITLE     Crystal structures reveal a thiol protease-like catalytic triad in
            the C-terminal region of Pasteurella multocida toxin
  JOURNAL   Proc Natl Acad Sci U S A 104 (12), 5139-5144 (2007)
   PUBMED   17360394
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042510.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20178.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1241
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..1241
                     /product="dermonecrotic toxin domain-containing protein"
                     /calculated_mol_wt=136031
     Region          1046..1218
                     /region_name="C58_PaToxP-like"
                     /note="peptidase C58 domain of Photorhabdus asymbiotica
                     toxin PaTox and LifA/Efa1-related large cytotoxin, and
                     similar proteins; cd20495"
                     /db_xref="CDD:410776"
     Site            order(1067..1070,1115,1154..1156)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:410776"
ORIGIN      
        1 mrhaahrasr hpserqpqkl spldnspamr rvvslanaqe nraltreati naispvldlr
       61 qfidhelisa ladvgitrnp dllylnrfky fgrpskmglp pgtlarsgli esltlseaar
      121 qfatkqnhik etplaygiyr hdrtrrnhfv pedevremtv pafekvidtc rqrwlshlnq
      181 legpraeady vealyerart aleqqaaiey nagrisgdgl vlaqivtyas dathrrlnld
      241 myignikghe iildvpgvgh vrpagafais eyparmthhp grilvavlgs gfplreyese
      301 lslerdlarg egsviyrelv grlpldmqpr cfvddpcrvm lpatqddvir lalrasfsvi
      361 rhdfdyggsa lfdgqrsavw ttwlaganat dfdtgmqeaa pgdtgfpagf ppdtlprerr
      421 lhidhraiea vhqvgrlrvh vsealpdlsr atedymtali mtltgqvvtt sqiylhvyrq
      481 rvstaldfpt ydwsgpetpi etssltqyla nrvsgaqtea lspgtrtifs ndadpvdare
      541 lnipnltpea llnaidtesf idqqtdvfdt fwqdhsqnmy vslkgafiie afvqlqegrl
      601 ppaaadiarr vagcasiysl nlepmhtpsi pdpdirmswl hvggaksdiq lfedlgtgwv
      661 lmyaprvlsd hliafhrhsa lhswlteqlg dtsarerlvs afskadrena mrtgligmpa
      721 prrgiipala fstslisgdp ftayldlfka rvqeethsrt ssltgslvap lldtlaatnf
      781 vfgltavaga alpgigatss tlsaitfamg atavafgdrp vrragwnaml sgatglpigw
      841 ytnaaatvsa qlrpflasas aqrlhplmpn lyrgeqgmvv rsgelyfnvd yfpnrgtwnv
      901 idharpgspg paisqtanyd wiledisahs tldgpvgatv fhddvslnfi dveyrsklsa
      961 qrhaasagrr eafqagrsea eksplnlppe arpsallkld fidpatsdpr llgilsrrve
     1021 evmrveatar aaanarlvag dihaasgefr plpqmaytas nadgrtgfcl plvrmmavaq
     1081 hrgeitsfir tiegavqwpq spqalslreq lvrlhssvea satethlglf dldrleqaia
     1141 agppratylv ttrshsmsil veragtvvyd pnfgvaefrs tgdalkafga lmrrgdlarl
     1201 ygafdglgem qfilkrvdve rlarvdvggt avsemaistw g
//
LOCUS       WP_257959808             416 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Pandoraea commovens].
ACCESSION   WP_257959808
VERSION     WP_257959808.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..416
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44592
     Region          8..381
                     /region_name="PRK15402"
                     /note="MdfA family multidrug efflux MFS transporter"
                     /db_xref="CDD:185300"
ORIGIN      
        1 mshsvsplsp rspvsrfwfp fslvlfefav yisndmimpg mplvtrefga saemttlalt
       61 aamlgnaslq wllgpladrf grrrvllsgl vmfivaclav hyvqtmpqfi alrflqgmgc
      121 cfvltvgypt vheafeekta vrvmalmanv sllsplfgpl agaavvsfwp wrsifwliai
      181 vavfsfvgly rtmpelsrhd rnalnakqlw agyklplssg rfwrgavltg lavtplltwi
      241 algpvflier aglsqmqyam lqvpvfaali lgnvllarqv grwsngrlla tgvaamliga
      301 avslvgtail apgypallig ttlhafgmgm cygvvyrqsl favdslnrat vagmlsmiti
      361 vvavavieam kfaylhfgda algigamlaa alvavlaanf vpppaqdtla qssrsp
//
LOCUS       WP_257959839             548 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Pandoraea commovens].
ACCESSION   WP_257959839
VERSION     WP_257959839.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 548)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..548
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=57676
     Region          44..178
                     /region_name="MCP2201-like_sensor"
                     /note="ligand-binding sensor domain of Comamonas
                     testosteroni CNB-2 MCP2201 and similar chemoreceptors;
                     cd19411"
                     /db_xref="CDD:438629"
     Site            order(49,52..53,56..57,59..60,63..64,67..68,70..71,74..77,
                     83..84,149,171,174..175)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:438629"
     Site            order(61..62,65,68,91..92,95,122,125..126,129,159)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:438629"
     Region          <204..513
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(300..301,304..305,308,311..312,314..315,318,
                     321..322,325,328..329,332..333,336,339..340,342..343,347,
                     349..350,353,356..357,360..361,364,367,370..371,374,378,
                     381,388,392,395,398..399,402,405..406,409..410,412..413,
                     416..417,430..431,434,437..438,441,444..445,447..448,
                     451..452,455,458..459,462,465..466,468..469,472..473,
                     475..476,479,482..483,486,489..490)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            370..403
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 mriadlkirt rlaigfgtll lllltmlvia lvrfiaiers neelltrawa kadaahsida
       61 mvrgnarrml evataqdpaq rkafnerida nlgriaaaqe vldkyvtsgr gkeliaslrk
      121 hndafqtsrn kiiadlnadq radaiglver ealpaldtmq aeaadlvklq qkivddtgaa
      181 taadiafakw llvalgavaa vvgigaaysv trsitrpiar avevaervaq gdltsrievt
      241 srdetgqlma alkhmnesld qivrrvrsgt aaiasasgel lagntdlssr teeqaaslee
      301 tassmeqlta tvkqnadnar qasqlaanas eiageggrvv eravssmqei aasstkindi
      361 igvidgiafq tnilalnaav eaarageqgr gfavvagevr tlaqrsaaaa keiksliets
      421 vgkvedgssq vrdagrtmte ivqavqrvtd imgeisaass eqsggieqvn tavmqmdqvt
      481 qqnaalveea taaagsledq arnlreavav frlpggdtan agydddagia snsprgavla
      541 fsrerqva
//
LOCUS       WP_257959914             234 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Pandoraea commovens].
ACCESSION   WP_257959914
VERSION     WP_257959914.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..234
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=24727
     Region          27..232
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(106,134,147,151)
                     /site_type="active"
                     /db_xref="CDD:187602"
ORIGIN      
        1 mtvekvalit aggsgmgaaa arrlaadgfk vgilsssgkg ealaaelggv gvtgsnqsne
       61 slkelvdlam qrwgridvlv nsaghgpraa ileisdedwh rgmdtylmnv irptrlvtpi
      121 mqtqgagaii nistawafep semfptsavf raglasftkl fadkyakdnv rmnnilpgwi
      181 dslpqqdvrr esvpmqrygk aeeiaatvaf lasegggyit gqnirvdggl trsv
//
LOCUS       WP_257959972            1051 aa            linear   BCT 02-MAR-2025
DEFINITION  efflux RND transporter permease subunit [Pandoraea commovens].
ACCESSION   WP_257959972
VERSION     WP_257959972.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 1051)
  AUTHORS   Murakami,S., Nakashima,R., Yamashita,E. and Yamaguchi,A.
  TITLE     Crystal structure of bacterial multidrug efflux transporter AcrB
  JOURNAL   Nature 419 (6907), 587-593 (2002)
   PUBMED   12374972
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00873.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..1051
                     /product="efflux RND transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=112147
     Region          4..1016
                     /region_name="PRK10503"
                     /note="MdtB/MuxB family multidrug efflux RND transporter
                     permease subunit"
                     /db_xref="CDD:182501"
ORIGIN      
        1 mnfsrifilr pvatwllmia lvliglvavr vlpvsslpsv dyptiqvqtf ypgaspsvma
       61 ttvtaplevq lgqipglqqm isysaegssv itlqfdlaln ldvaqqnvqq ainaansllp
      121 sglpapptya kvnpadqpim tlavtsptls ltqlqdaann rlaakisqva gvgfvtlagg
      181 nvpavrvead pqklaaygln lddlrtllan vnvsqpkgnf dgpeldytld andqitdpqd
      241 yldtviayqn gnpvylrdva hvakaaqdve rgawlnktpa ivlnvqrqpg anviatvdqi
      301 kralpqleat lpagmkvsvv sdstgvvras vsdaafelvl avvlvvavif vflrnvpatv
      361 ipsisvpvsl iatlavmyel gysidnlslm aliiatgfvv ddsivmienv vryleagmap
      421 leaalagagq igftimslti sliavlipll fmggvigrlf gefavtlavt ivisaivslt
      481 vvpmlcaril raqearhpsr feraservfd ktlaayergl kwvldhqflt lmvalvtval
      541 tvvlyvvipk glfpvqdvgv lqgitvadns vsyaamvrrq aaladvvlqd pdvtsitsyv
      601 gidginttln ngrflinlka rddrsdsave igrrlqqata kvpgirlyvq paqdltldtt
      661 vspnqykfvm rgpdqatlak yvppliarmk qissitdvas dldtsglsiq vevnrqlaar
      721 ygitpatidn alydalgqri vstifeqsaq yrvilvakpe slnsiqslgt iylpsqtsss
      781 gqvplsaias lkvvrtplai shlqqfpavt vsfnlapdas lssavkeirn aeqavhlpps
      841 iassfqgaaq afedslssev yllvaalvav yivlgvlyes fihpvtilst lpsagigall
      901 almltgsdld vigiigivll igivkknaim mvdfaldaer thnkppreai feasllrfrp
      961 ilmttlaaml galpmllgsg tgselrrplg laiigglams qlltlfttpv iylyfdrlaa
     1021 rvrerraarr errahaghmr tppddepgga p
//
LOCUS       WP_257960046             170 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Pandoraea commovens].
ACCESSION   WP_257960046
VERSION     WP_257960046.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (residues 1 to 170)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 170)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..170
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=19437
     Region          <1..138
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(2..3,71,73,102,136)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:271177"
     Site            order(2,102,105,127,136)
                     /site_type="active"
                     /db_xref="CDD:271177"
ORIGIN      
        1 mrrseichir reyvdllhgv vhlpdtkngt srdvplspwa retlrqylag rpqrgpifsv
       61 spgaatrafi rartrarary ealcrslgrr anpqffsdlr lhdlrheats vlapifqlhe
      121 lakisghkst rmllryyhpd grelarkiar splgrkqaar irsergtved
//
LOCUS       WP_257960152             847 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6600 domain-containing protein [Pandoraea commovens].
ACCESSION   WP_257960152
VERSION     WP_257960152.1
KEYWORDS    RefSeq.
SOURCE      Pandoraea commovens
  ORGANISM  Pandoraea commovens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042645.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20245.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..847
                     /organism="Pandoraea commovens"
                     /db_xref="taxon:2508289"
     Protein         1..847
                     /product="DUF6600 domain-containing protein"
                     /calculated_mol_wt=89456
     Region          30..193
                     /region_name="COG4254"
                     /note="Uncharacterized peptidoglycan binding protein,
                     contains LysM and FecR domains [General function
                     prediction only]"
                     /db_xref="CDD:443396"
     Region          239..358
                     /region_name="DUF6600"
                     /note="Family of unknown function (DUF6600); pfam20245"
                     /db_xref="CDD:466396"
     Region          <539..709
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
ORIGIN      
        1 mksliswrtt vrslgvglal gllgavgapa vvmaqaqaqs adppgrvarl sefdgtvtya
       61 pagtsdwrya drnrplttgd aiwvdrnsra emhvggtavr mgastsltls avtdqnvqln
      121 vtqgtvgvrl rsfdpnqpye idtpnlafvp qqageyrvdv dpngvttvsv srgagtaygq
      181 gasvplqqgq rvafvgqnlt qqqtgpltad afdqwmrdrd aredasvsar yvprdmtgfe
      241 slddygswqe tpsygavwvp snmpsgwapy rtghwawvdp wgwtwvddap wgfapyhygr
      301 wayvdarwcw vpgpvavrpv yapalvgwvs gssggnqwgv sfaaggvgla wfalgphdpy
      361 rpayhasssy itninrstiv rttnitnnin vnniyvnrnv rgavstmpaq afvqgrpvga
      421 ptalaaprga qtwrvgntpg vapvqqsvfg nsrpaagapp agvfnrqvla trapvargmp
      481 sreltsqlha vpnaggaplv fgqngqqvrn lgaggpngpn gpngqpriap rvtvvsthgp
      541 vgapiganga mpalgatgav gataghgglp atgavppmhg apgvpgqpgv pgapghagvp
      601 gqpgvpgtpg vpsepgypgh gvyqnrpgqs avqsqpterq papsgvphpp gvngavqgqa
      661 qpsargeapq avpqpghdaa qremqmrrqs pqapqspavq pearggqatp apqrqqqqpe
      721 aaeparrpqq wqtqprpepq qfqqprpqpq veraqprpep qpqqqaqpqp rpqpqpqver
      781 mpprpqppve hvqpaprpqp qqerpqaqph pqptqregkp egarasahee hpsadhrssh
      841 ddehrhg
//
LOCUS       WP_257960172             210 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease subunit S [Gardnerella vaginalis].
ACCESSION   WP_257960172
VERSION     WP_257960172.1
KEYWORDS    RefSeq.
SOURCE      Gardnerella vaginalis
  ORGANISM  Gardnerella vaginalis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Gardnerella.
REFERENCE   1  (residues 1 to 210)
  AUTHORS   Janscak,P. and Bickle,T.A.
  TITLE     The DNA recognition subunit of the type IB restriction-modification
            enzyme EcoAI tolerates circular permutions of its polypeptide chain
  JOURNAL   J Mol Biol 284 (4), 937-948 (1998)
   PUBMED   9837717
REFERENCE   2  (residues 1 to 210)
  AUTHORS   Bickle,T.A. and Kruger,D.H.
  TITLE     Biology of DNA restriction
  JOURNAL   Microbiol Rev 57 (2), 434-450 (1993)
   PUBMED   8336674
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01420.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Gardnerella vaginalis"
                     /db_xref="taxon:2702"
     Protein         1..210
                     /product="restriction endonuclease subunit S"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=23502
     Region          59..>161
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
     Region          <123..203
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
     Site            order(123,126..127,129..130,157,159,165,169,172..173,194,
                     196..197)
                     /site_type="other"
                     /note="TRD-CR/TRD-CR interface [polypeptide binding]"
                     /db_xref="CDD:341131"
ORIGIN      
        1 mltlksahtl hpacevgndn laamicdfym hkffrrdpng klgyiiseek kstiqvgtak
       61 dlngeypfft sgdtvlscdk plvnnricll ntggnadvkf yvgpasystd twcitgtdgl
      121 sdylftllys ikqelnlkff lgtglkhlqk pllknrpiyv pneielktfn sfampaytti
      181 sanqrenral ralrdwllpm lmngqatied
//
LOCUS       WP_257960177              81 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease subunit S [Gardnerella vaginalis].
ACCESSION   WP_257960177
VERSION     WP_257960177.1
KEYWORDS    RefSeq.
SOURCE      Gardnerella vaginalis
  ORGANISM  Gardnerella vaginalis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Gardnerella.
REFERENCE   1  (residues 1 to 81)
  AUTHORS   Janscak,P. and Bickle,T.A.
  TITLE     The DNA recognition subunit of the type IB restriction-modification
            enzyme EcoAI tolerates circular permutions of its polypeptide chain
  JOURNAL   J Mol Biol 284 (4), 937-948 (1998)
   PUBMED   9837717
REFERENCE   2  (residues 1 to 81)
  AUTHORS   Bickle,T.A. and Kruger,D.H.
  TITLE     Biology of DNA restriction
  JOURNAL   Microbiol Rev 57 (2), 434-450 (1993)
   PUBMED   8336674
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01420.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Gardnerella vaginalis"
                     /db_xref="taxon:2702"
     Protein         1..81
                     /product="restriction endonuclease subunit S"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=9165
     Region          <4..79
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
ORIGIN      
        1 mqmskkldpk fmafylrgsy frrtinslat mttrasfnet lfsflslelp dintqvaign
       61 llfnlekkiq ankklndnla a
//
LOCUS       WP_257960187             140 aa            linear   BCT 02-MAR-2025
DEFINITION  IS3 family transposase [Gardnerella vaginalis].
ACCESSION   WP_257960187
VERSION     WP_257960187.1
KEYWORDS    RefSeq.
SOURCE      Gardnerella vaginalis
  ORGANISM  Gardnerella vaginalis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Gardnerella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024673.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13276.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Gardnerella vaginalis"
                     /db_xref="taxon:2702"
     Protein         1..140
                     /product="IS3 family transposase"
                     /calculated_mol_wt=16202
     Region          <1..>127
                     /region_name="transpos_IS3"
                     /note="IS3 family transposase; NF033516"
                     /db_xref="CDD:468052"
ORIGIN      
        1 mheiseenff tygssriwlv lrtkgikvse kvvrrlmkee lievryarrk rryssyigei
       61 tpacsnivnn nfhadshnki wltditefsv keskpylspm idcfdgkvvs yalsnhpdqc
      121 ledemlesss ttfenvipfv
//
LOCUS       WP_257960228             234 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257960228
VERSION     WP_257960228.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 234)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..234
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          1..195
                     /region_name="PBP2_CrgA_like_4"
                     /note="The C-terminal substrate binding domain of an
                     uncharacterized LysR-type transcriptional regulator
                     CrgA-like, contains the type 2 periplasmic binding fold;
                     cd08473"
                     /db_xref="CDD:176162"
     Site            order(6,10,49,65,67,130,147,174)
                     /site_type="active"
                     /note="putative effector binding pocket [active]"
                     /db_xref="CDD:176162"
     Site            order(7..8,12..13,15..16,19,23,25..31,94,124..128,
                     135..136,139)
                     /site_type="other"
                     /note="putative dimerization interface [polypeptide
                     binding]"
                     /db_xref="CDD:176162"
ORIGIN      
        1 svpvslaqmq lpkllpkfle qypkvrlqln isnrrvdiin egydvalrvr srldddgslv
       61 mrsfgqvqel lvaspkyldr agrpkdpeel tqhvtlsise dearqrwelh gpegevrrvd
      121 lqprvagfdf pllqsmvkdg fgitmlpetv cadavrngel evvlpdwslp qgvchavfas
      181 rrgllpavrv fidflaehlp pqleasrldc ggacekaker ikasalgala vdag
//
LOCUS       WP_257960243             161 aa            linear   BCT 02-MAR-2025
DEFINITION  deoxyribodipyrimidine photo-lyase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257960243
VERSION     WP_257960243.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 161)
  AUTHORS   Tamada,T., Kitadokoro,K., Higuchi,Y., Inaka,K., Yasui,A., de
            Ruiter,P.E., Eker,A.P. and Miki,K.
  TITLE     Crystal structure of DNA photolyase from Anacystis nidulans
  JOURNAL   Nat Struct Biol 4 (11), 887-891 (1997)
   PUBMED   9360600
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013071.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00875.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>161
                     /product="deoxyribodipyrimidine photo-lyase"
                     /EC_number="4.1.99.3"
     Region          1..>161
                     /region_name="PRK10674"
                     /note="deoxyribodipyrimidine photolyase; Provisional;
                     cl30787"
                     /db_xref="CDD:453097"
ORIGIN      
        1 mathlvwlrt dlrihdnlal aaacrdpqaq vlalyiatpg qwrehhlapr qaafiashlq
       61 slhaalaerg iplwveeadd ftasverlad fcqqhqvshl fynyqyefne rqrdaavent
      121 lcdvicqgfd dsvllppgsv ltgggemykv ftpfknafir r
//
LOCUS       WP_257960303             267 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257960303
VERSION     WP_257960303.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 267)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 267)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 267)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 267)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..267
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <1..257
                     /region_name="type_I_sec_LssB"
                     /note="type I secretion system ATPase, LssB family;
                     TIGR03375"
                     /db_xref="CDD:274550"
ORIGIN      
        1 akasldnlma lpveggldep rihravlhgn yefrnaefry gkdngpaplr ikqlsikage
       61 kiavlgriga gkstllqamm gnveltsgel rlddlslpqi dladirrnat lltqearlfh
      121 gtlrenvtlg rpmasddelv kvlelcgale fvnklpmgle hlvmegglgl sggqrqslll
      181 aralirdpni illdeptsff dertekafve qlarwagert liiathkaav lnivdrilvi
      241 qdgqlaldkp katvfeqeka raqvvni
//
LOCUS       WP_257960317             180 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3944 domain-containing protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257960317
VERSION     WP_257960317.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024499.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13099.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>180
                     /product="DUF3944 domain-containing protein"
     Region          1..>180
                     /region_name="PRK10236"
                     /note="acidic protein MsyB"
                     /db_xref="CDD:182323"
ORIGIN      
        1 mhinyleddd laflpecsea hleaftrilt hgengkprls stllrnetfl ameghperyr
       61 rnwqliagel qhfggdsian tlrrhgkfyr ailldvckrl kakvdkqlst pqieqqllah
      121 flqhswnkln aeqkahflaa vecrshelds lmahllrhrk lsegvtllld erltailrth
//
LOCUS       WP_257960347             149 aa            linear   BCT 02-MAR-2025
DEFINITION  Ldh family oxidoreductase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257960347
VERSION     WP_257960347.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 149)
  AUTHORS   Jendrossek,D., Kratzin,H.D. and Steinbuchel,A.
  TITLE     The Alcaligenes eutrophus ldh structural gene encodes a novel type
            of lactate dehydrogenase
  JOURNAL   FEMS Microbiol Lett 112 (2), 229-235 (1993)
   PUBMED   8405966
REFERENCE   2  (residues 1 to 149)
  AUTHORS   Honka,E., Fabry,S., Niermann,T., Palm,P. and Hensel,R.
  TITLE     Properties and primary structure of the L-malate dehydrogenase from
            the extremely thermophilic archaebacterium Methanothermus fervidus
  JOURNAL   Eur J Biochem 188 (3), 623-632 (1990)
   PUBMED   2110059
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014653.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02615.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>149
                     /product="Ldh family oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
     Region          1..>149
                     /region_name="PRK15025"
                     /note="ureidoglycolate dehydrogenase; Provisional;
                     cl00900"
                     /db_xref="CDD:469982"
ORIGIN      
        1 mptghrflat dlhqfvvslf thlgstpgea tlvadhliaa nlaghdshgv gmipsyvksh
       61 aggflqlnrh atvtkdagav vtldgnagfg qvvaheamql giekakqhgm aaialrnahh
      121 vgrigywaeq caaaglisih fvsvigdpm
//
LOCUS       WP_257960383            1959 aa            linear   BCT 02-MAR-2025
DEFINITION  PBECR4 domain-containing protein [Streptococcus oralis].
ACCESSION   WP_257960383
VERSION     WP_257960383.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus oralis
  ORGANISM  Streptococcus oralis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 1959)
  AUTHORS   Iyer,L.M., Burroughs,A.M., Anand,S., de Souza,R.F. and Aravind,L.
  TITLE     Polyvalent Proteins, a Pervasive Theme in the Intergenomic
            Biological Conflicts of Bacteriophages and Conjugative Elements
  JOURNAL   J Bacteriol 199 (15), e00245-17 (2017)
   PUBMED   28559295
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037419.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18813.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1959
                     /organism="Streptococcus oralis"
                     /db_xref="taxon:1303"
     Protein         1..1959
                     /product="PBECR4 domain-containing protein"
                     /calculated_mol_wt=225244
     Region          20..>139
                     /region_name="DnaG"
                     /note="DNA primase (bacterial type) [Replication,
                     recombination and repair]; COG0358"
                     /db_xref="CDD:440127"
     Region          229..351
                     /region_name="Toprim_2"
                     /note="Toprim-like; pfam13155"
                     /db_xref="CDD:463793"
     Region          <355..679
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
     Region          1082..1266
                     /region_name="PBECR4"
                     /note="phage-Barnase-EndoU-ColicinE5/D-RelE like
                     nuclease4; pfam18813"
                     /db_xref="CDD:436757"
     Region          1376..1495
                     /region_name="LPD25"
                     /note="Large polyvalent protein associated domain 25;
                     pfam18840"
                     /db_xref="CDD:436774"
     Region          <1702..1888
                     /region_name="ArdC"
                     /note="Antirestriction protein ArdC [Replication,
                     recombination and repair]; COG4227"
                     /db_xref="CDD:443371"
     Region          <1817..>1850
                     /region_name="DUF6782"
                     /note="Putative metallopeptidase family (DUF6782);
                     pfam20573"
                     /db_xref="CDD:466722"
ORIGIN      
        1 mteqesrrgk trrervefar srdildvane lqmelvrsgr dyrwkehdsl vispdknlwk
       61 wfsrntggda islvetikev dfnqsvdfln dgnfkefqlv erpqedfkyy lekyeqplsa
      121 grdylrnqrg lsdetidyfl eqgvlaqana kldyfvegng gnstnaiepv ivfkslsssg
      181 evvgaslqgi qenwekwpkh gyakvimkns dpmtgihvdi gspkrlifte spidlmsyye
      241 lhkdslqdvr lvsmdglkes tigrhlsqiq aeisgkplrw tpeqladgiq vaidhhffed
      301 gknadlitla ldndkagrtf iqeleakgav insdlpelkp gqdktdwndv lknqqeekpd
      361 nsrlaqarrk lerlrgeqde aisrayshqa ltngqpmndk rgsasfmrkq eqiedqvfsk
      421 mdeirqqeer verlehqqhl kemglnrqgs glemsvqnip rireelekak rgesfftkat
      481 lkryqeeltr leaiseqmgk tsiqpatqal ideglvnqwq kqpntyfvkg lrrvalelte
      541 egefqlssqt kyhpktdeer lkvdellakq rqenvgltps nqeksispqp epieknqgea
      601 gwleknwdnl tfsienkktv vidptridkm veekqtpdnq esittteena grlmsyeevk
      661 renealtksl nnriqsgels iefapdfyly dvfaklgnsh ptkylsdkkm evlspihsll
      721 tsiddqtidl ykkkgtpeqd slyqalkphq rtlgvdistr figelaiaay stnkqiesls
      781 sdsfgvyfge rtldnlsqsv ermleyplie sgtrdfahgf vttpntlfhy leeqegevvl
      841 nrelldnlms rlethpikim edseevepvr pvivlkqdel ysdywrvyqs dgelefylfe
      901 dgqfgyrqyg slsqkedniv fkyhsepgkt eflatqmgyd slkyivvkdw eslfdenkal
      961 lrenyvfddl enflkksnyf eldywtfnsg lkedeeflne itkkahdqnq elsnntggel
     1021 lnrnssflgv etpgtapqpv eknsqpdfpa nvhlhftide drmsnkifrk nmrtlnlyan
     1081 amrdsaqwyl kemsgtsihy vyknpeekqf qilnvkfdkk nwmhltgvtp vynewvehls
     1141 esfvedvaag kghfkdlkfa qgmsdklkvl nllpeviesd sfvfndlssv kkfnnldlsk
     1201 airpedtdll llfkekefth vpaslmrvkg dlskqledid tgtilgvyre rdghieqlsi
     1261 neeyvkdgge emlsvlknrq yeevseepep papentlnka sldsatftqv ldtvynlgvp
     1321 sdisktpeef hqawnqyldy akqhndkfdq ivaaagkdhl ldtnsdfyke wtqdhiyken
     1381 yhvrlqwsed rpggpklpfk etelisyqdf arelykanqd fypihqegmk qvtagntegy
     1441 ipptkikfdv yapggemike girydigaet tpisqmlglg yrrlngqsvl asmdeeilsq
     1501 lensevnkei sqeanestrl teevagqtpd tretvafqss kqetktnllq rveeilkeep
     1561 isdletpevn sssidyaslt phelsevafq kvreytetpe rleeylnfms kfpelsprnv
     1621 aliqeqwpga navatynqwq smgevlgits dqvfetrnty tnkktgrtre vihnnlsvkt
     1681 gekshitlfr pmmvemipvl dengnqvkng kgnpkykrls eatpeekalk kegklksrff
     1741 qerdsntgla kfatykvfel sqttlkpefy pkampnrhyd fnmdhvrtke vleglsdyan
     1801 sigvtiyqdd akelrsakga fypdeqkill npdntpgevv attihelaha tlhnpkfans
     1861 ykedvskdrr eleaemtsyl vskhfgldts ekairymaiw tdnltslddq qlaqsmkrih
     1921 gtvskivksv eqhtktyqln rqvaqnqnfi qspkkglkv
//
LOCUS       WP_257960393             299 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6685 family protein [Klebsiella pneumoniae].
ACCESSION   WP_257960393
VERSION     WP_257960393.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042758.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20390.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..299
                     /product="DUF6685 family protein"
                     /calculated_mol_wt=34869
     Region          103..296
                     /region_name="DUF6685"
                     /note="Family of unknown function (DUF6685); pfam20390"
                     /db_xref="CDD:466539"
ORIGIN      
        1 mdkmdiipnr piwkkiihsi hdgfwdslgy patlsrrvhy gvlkakrphi qntiwlrsvi
       61 kwqtwlnyee nhicylhpgh ngdydllhrh ipqldglvsn tviknyrcdi ssvgglsssn
      121 nsdiniatld dfalefsrel atpisvdqlr knldhhrlrl ykmffsqysw mpgrlywnni
      181 dgfqhftavr ylsiqlgvpv qlkgelnsfn lnlkkvqqlt dvwdlyllpd kevygilldc
      241 llrvkiplgi snapdwenge ntkyriiwle rdkiiparvs rfltqagfas vnqyllqqk
//
LOCUS       WP_257960404              55 aa            linear   BCT 02-MAR-2025
DEFINITION  transketolase-like TK C-terminal-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257960404
VERSION     WP_257960404.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 55)
  AUTHORS   Veitch,N.J., Maugeri,D.A., Cazzulo,J.J., Lindqvist,Y. and
            Barrett,M.P.
  TITLE     Transketolase from Leishmania mexicana has a dual subcellular
            localization
  JOURNAL   Biochem J 382 (Pt 2), 759-767 (2004)
   PUBMED   15149284
REFERENCE   2  (residues 1 to 55)
  AUTHORS   Gerhardt,S., Echt,S., Busch,M., Freigang,J., Auerbach,G., Bader,G.,
            Martin,W.F., Bacher,A., Huber,R. and Fischer,M.
  TITLE     Structure and properties of an engineered transketolase from maize
  JOURNAL   Plant Physiol 132 (4), 1941-1949 (2003)
   PUBMED   12913150
REFERENCE   3  (residues 1 to 55)
  AUTHORS   Arjunan,P., Nemeria,N., Brunskill,A., Chandrasekhar,K., Sax,M.,
            Yan,Y., Jordan,F., Guest,J.R. and Furey,W.
  TITLE     Structure of the pyruvate dehydrogenase multienzyme complex E1
            component from Escherichia coli at 1.85 A resolution
  JOURNAL   Biochemistry 41 (16), 5213-5221 (2002)
   PUBMED   11955070
REFERENCE   4  (residues 1 to 55)
  AUTHORS   Fiedler,E., Thorell,S., Sandalova,T., Golbik,R., Konig,S. and
            Schneider,G.
  TITLE     Snapshot of a key intermediate in enzymatic thiamin catalysis:
            crystal structure of the alpha-carbanion of
            (alpha,beta-dihydroxyethyl)-thiamin diphosphate in the active site
            of transketolase from Saccharomyces cerevisiae
  JOURNAL   Proc Natl Acad Sci U S A 99 (2), 591-595 (2002)
   PUBMED   11773632
REFERENCE   5  (residues 1 to 55)
  AUTHORS   Wikner,C., Nilsson,U., Meshalkina,L., Udekwu,C., Lindqvist,Y. and
            Schneider,G.
  TITLE     Identification of catalytically important residues in yeast
            transketolase
  JOURNAL   Biochemistry 36 (50), 15643-15649 (1997)
   PUBMED   9398292
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046326.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22613.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..55
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..55
                     /product="transketolase-like TK C-terminal-containing
                     protein"
     Region          <1..55
                     /region_name="TktA"
                     /note="Transketolase [Carbohydrate transport and
                     metabolism]; COG0021"
                     /db_xref="CDD:439792"
ORIGIN      
        1 vaveagiady wfkyvglnga ivglttfges apaeqlfeey gftvdnvvak akall
//
LOCUS       WP_257960406            2966 aa            linear   BCT 02-MAR-2025
DEFINITION  mucin-binding protein [Streptococcus mitis].
ACCESSION   WP_257960406
VERSION     WP_257960406.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus mitis
  ORGANISM  Streptococcus mitis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus; Streptococcus mitis group.
REFERENCE   1  (residues 1 to 2966)
  AUTHORS   MacKenzie,D.A., Tailford,L.E., Hemmings,A.M. and Juge,N.
  TITLE     Crystal structure of a mucus-binding protein repeat reveals an
            unexpected functional immunoglobulin binding activity
  JOURNAL   J Biol Chem 284 (47), 32444-32453 (2009)
   PUBMED   19758995
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17966.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2966
                     /organism="Streptococcus mitis"
                     /db_xref="taxon:28037"
     Protein         1..2966
                     /product="mucin-binding protein"
                     /calculated_mol_wt=318616
     Region          9..>280
                     /region_name="PspC_subgroup_1"
                     /note="pneumococcal surface protein PspC, choline-binding
                     form; NF033838"
                     /db_xref="CDD:468201"
     Region          11..36
                     /region_name="YSIRK_signal"
                     /note="YSIRK type signal peptide; pfam04650"
                     /db_xref="CDD:428049"
     Region          286..>1061
                     /region_name="RhsA"
                     /note="Uncharacterized conserved protein RhaS, contains 28
                     RHS repeats [General function prediction only]; COG3209"
                     /db_xref="CDD:442442"
     Region          874..>1267
                     /region_name="AidA"
                     /note="Autotransporter adhesin AidA [Cell
                     wall/membrane/envelope biogenesis, Intracellular
                     trafficking, secretion, and vesicular transport]; COG3468"
                     /db_xref="CDD:442691"
     Region          1070..1179
                     /region_name="CshA_repeat"
                     /note="Surface adhesin CshA repetitive domain; pfam19076"
                     /db_xref="CDD:436944"
     Region          1186..1296
                     /region_name="CshA_repeat"
                     /note="Surface adhesin CshA repetitive domain; pfam19076"
                     /db_xref="CDD:436944"
     Region          1313..1409
                     /region_name="CshA_repeat"
                     /note="Surface adhesin CshA repetitive domain; pfam19076"
                     /db_xref="CDD:436944"
     Region          1411..1525
                     /region_name="CshA_fibril_rpt"
                     /note="CshA-type fibril repeat; TIGR04225"
                     /db_xref="CDD:275066"
     Region          1530..1642
                     /region_name="CshA_repeat"
                     /note="Surface adhesin CshA repetitive domain; pfam19076"
                     /db_xref="CDD:436944"
     Region          1661..1733
                     /region_name="MucBP"
                     /note="MucBP domain; pfam06458"
                     /db_xref="CDD:461917"
     Region          1737..1824
                     /region_name="MucBP_2"
                     /note="Mucin binding domain; pfam17965"
                     /db_xref="CDD:465592"
     Region          1864..1932
                     /region_name="Muc_B2"
                     /note="Muc B2-like domain; pfam17966"
                     /db_xref="CDD:465593"
     Region          1966..2056
                     /region_name="CshA_fibril_rpt"
                     /note="CshA-type fibril repeat; TIGR04225"
                     /db_xref="CDD:275066"
     Region          2069..2161
                     /region_name="CshA_fibril_rpt"
                     /note="CshA-type fibril repeat; TIGR04225"
                     /db_xref="CDD:275066"
     Region          2169..2243
                     /region_name="MucBP_2"
                     /note="Mucin binding domain; pfam17965"
                     /db_xref="CDD:465592"
     Region          2286..2350
                     /region_name="Muc_B2"
                     /note="Muc B2-like domain; pfam17966"
                     /db_xref="CDD:465593"
     Region          2473..2522
                     /region_name="repeat_SSSPR51"
                     /note="surface protein repeat SSSPR-51; TIGR04308"
                     /db_xref="CDD:275115"
     Region          2524..2572
                     /region_name="repeat_SSSPR51"
                     /note="surface protein repeat SSSPR-51; TIGR04308"
                     /db_xref="CDD:275115"
     Region          2574..2622
                     /region_name="repeat_SSSPR51"
                     /note="surface protein repeat SSSPR-51; TIGR04308"
                     /db_xref="CDD:275115"
     Region          2624..2672
                     /region_name="repeat_SSSPR51"
                     /note="surface protein repeat SSSPR-51; TIGR04308"
                     /db_xref="CDD:275115"
     Region          2674..2720
                     /region_name="repeat_SSSPR51"
                     /note="surface protein repeat SSSPR-51; TIGR04308"
                     /db_xref="CDD:275115"
     Region          2722..2768
                     /region_name="repeat_SSSPR51"
                     /note="surface protein repeat SSSPR-51; TIGR04308"
                     /db_xref="CDD:275115"
     Region          2770..2813
                     /region_name="repeat_SSSPR51"
                     /note="surface protein repeat SSSPR-51; TIGR04308"
                     /db_xref="CDD:275115"
     Region          <2826..>2925
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          2836..2882
                     /region_name="repeat_SSSPR51"
                     /note="surface protein repeat SSSPR-51; TIGR04308"
                     /db_xref="CDD:275115"
ORIGIN      
        1 mkgkqqdfrt ekyirygirk ysfgaasvai aaglmflgng avsaieqnpv sdskeniqkv
       61 ensspelges niqlvdktie tpkkeelkvn kslletsisn leavlsnaky adasvvanvr
      121 ealatakavl aneaakqeev nvqkeilsal gtvvtesnkl glekeqadkd kvakeeaqrn
      181 atptekvlse aksaldkvss eadvtntlaa telrkkevaa enraaieaav aknqavides
      241 killadksvt keqvdaqlar lnesilavys elkkagigrd gklavalaaq dfyaeestnt
      301 thasdinatv ytgtdtytip hkeikptpag vntaglevvv ysnqrdgadk nagnaqttag
      361 ggrtghnnkg rvdypltpea skklveeapl wrnklradgs tiadrataiy sadggyeyla
      421 teiykygyeq gidrvyirgl kdriavteaa kkagwsltsi kptnmvpgla ydeatdtiqg
      481 vvssdiengv ydlrfnitat ntdgrsvtfq lqnlrmgwvg wqdttppkie sdsaryertv
      541 gddaninvri ydnagsgvip kgssgdydyt taegkvikvr kqnspavtgv sgynttgatl
      601 ddskvlipgt nyslsnssra eqandrtnng naiiggkvte agiytvsvya kdydklskrt
      661 twnqsgqeah asitvvvkpk vevqnvetys ttvpvkisrg atsakvtmpd gtvtnlkvvn
      721 gkwrvdsgst nravtenqel gsvdsdtifn ipvtseatak vgvdnitvea ssenvkgtfl
      781 reqveltgtd nkkhtaklns atghwelpad yaevktpngd gtttwikrqv yteaqqdgam
      841 kfyiyeytrk lyingkvisv ttperpltey askntsqagd gmsvtitydk hsntwtssdg
      901 tevtatklgd dswevltksg fggiirgtia tnsdvatvvn tkptassqdy tstkgttvdl
      961 rneakaavti sdtedtkygk ttyitritvt spsgvqkvyd tkqdannynl asgytlnevg
     1021 vytvtvdvid sngnyttdat iggtesgvdh gagsstattt yhitvtdtie ghdatssdiq
     1081 gatqtgtptf tsvgdgstis psatspaklv aadgslvdtl pvanegtyti dpetgvvnfk
     1141 plptftgpas pvtvkltail gtdtnnanit etatatytpt vvpvkptava sqttgpqgka
     1201 qtsaikfdaa dtddttvnfa kgtvaidant tksvdlntas vtllnangda vtsvtveneg
     1261 tytldtatnv itfqpvatft gtvtkpvsvr iadangttvt ttytptvtdv tmtaenatst
     1321 dvqgktqtgt pefetsdssv tiakrqlldp ttlqpttsvt ianegtytid pttgvvtfvp
     1381 vptftgegtg vtvqatdsng eiataaykpt vtpititges vtskniqgeq qsetplfsss
     1441 yksapvsnyk lvdpttgnpt tetsvtvenv gtytidsttg kvtfqpvaty tgtpapvtvq
     1501 asatitnekd estvitgtat ytptvvpvap takesatagk qgqaqtsqiv fdipdtdatt
     1561 lnfakgetse vlgedgqpks valdkstltl ldangnavtt vtvdgegtyt ldkttnvitf
     1621 qpteeftgka tpvrvqiadi ngttvttnyt ptvvaedgtv iveykdeegn iispsttpan
     1681 nekvttpftt epkeipgytl vkvettngtv degtkkvsgk vtneqttvty tyrknvqtat
     1741 isyydvttga evaidsakvp aaavetvegv yngaidftnr ekaiaaleka gytlvedgfi
     1801 vattadklfd ndtavnqnft vtvkqrvepv tpndekpvpg qpvdpenpns pvwpstaesl
     1861 eltktvtrti kyryndengk evtadkvqtv tftrsasinl vtgnveytdw saaqtleavv
     1921 spevanythd kktvtslevt nestdstvyv iytpvapttt patstdiqgk tqtgtptykh
     1981 adgtelkptt dnpakfvgte ettipatkdg ktvgtytidp tgtvtftpnk dfvgtpdpak
     2041 vvvtdptngt tvessytptv tpvtptgvdt sstgpkntpq sgtptfvpgh kdvpmdntvp
     2101 atfedgttsk tvpnegtytv datgkvtftp nkdfvgtatg vtivrkdtng tvakakyipt
     2161 vyevksdtqv atvtykdtng tilgevdilq gdsgsemnys taerinalkk lgyelvsdef
     2221 tkadgskqsf dndtkaiqkf vvtvqprlvp vipsdvtpvp gqpidpedpn spvwpesvke
     2281 lttseevtrt ityvdgdgke vttsvtssvk ftrdakvnlv tgevtygewk eattdvlsgn
     2341 klplvkgyia lsgdieastk dqtvkaedkd iiqkvvykkl gawipnvpgq tnppridypn
     2401 dpngdptkpg vptedivipy vpgyiprdkd gnplkpvdpe dptkgyvppt lptdpsqdtp
     2461 inytkittsy vtvdpngkev sipnypredg eqpkkdipgy rfvetkklpn gdtehvyekv
     2521 stffkdkegn eipnypsepg tvdkkdipey rfvetkklpn gdvehvyekv ntffkdkegn
     2581 eipkypsepg tvdkkdipey rfvetkklpn gdtehiyekv ntffkdkegn eipkypsepg
     2641 tvdkkdipey rfvetkklpn gdvehvyekv ttffkdkdgn eikekesgsv dkkdipeyrf
     2701 vetkklpngd tehvyekvtt ffkdkdgnei kekesgsvdk kdipeyrfve tkklpngdve
     2761 hvyekvntff kdkdgneike kesgsvdkkd ipeyrfvetk klpngdiehv yekvtppapt
     2821 pspvpqpnpg kqntttwtde ngnplkptep gskepgripg yeyvktvtgs ngnirhifrk
     2881 vemptptpve pvqpvspkep etpeqpvtpe mptvpeqpkq pttpkyvdgq kelpntgtea
     2941 naslaalgll galsgfglla rkkked
//
LOCUS       WP_257960447             138 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: Rib/alpha-like domain-containing protein, partial
            [Streptococcus].
ACCESSION   WP_257960447
VERSION     WP_257960447.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus
  ORGANISM  Streptococcus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae.
REFERENCE   1  (residues 1 to 138)
  AUTHORS   Wastfelt,M., Stalhammar-Carlemalm,M., Delisse,A.M., Cabezon,T. and
            Lindahl,G.
  TITLE     Identification of a family of streptococcal surface proteins with
            extremely repetitive structure
  JOURNAL   J Biol Chem 271 (31), 18892-18897 (1996)
   PUBMED   8702550
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020018.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08428.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Streptococcus"
                     /db_xref="taxon:1301"
     Protein         <1..>138
                     /product="Rib/alpha-like domain-containing protein"
     Region          <1..47
                     /region_name="Rib"
                     /note="Rib domain; pfam08428"
                     /db_xref="CDD:462474"
     Region          <74..117
                     /region_name="Rib"
                     /note="Rib domain; pfam08428"
                     /db_xref="CDD:462474"
ORIGIN      
        1 ndypddatfe ykeevdtskp gdkkvtvvvk qgdkvlvevp atvrvvesyp qfvpvdkdkk
       61 qpavegsidp kafpkdteft yetpvdtttp gekdvvvvak igdkvitkvp akvmvvepkt
      121 qyvpvdksnk qpdasksi
//
LOCUS       WP_257960496             191 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257960496
VERSION     WP_257960496.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 191)
  AUTHORS   Gao,G., Nara,T., Nakajima-Shimada,J. and Aoki,T.
  TITLE     Novel organization and sequences of five genes encoding all six
            enzymes for de novo pyrimidine biosynthesis in Trypanosoma cruzi
  JOURNAL   J Mol Biol 285 (1), 149-161 (1999)
   PUBMED   9878395
REFERENCE   2  (residues 1 to 191)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
REFERENCE   3  (residues 1 to 191)
  AUTHORS   Nygaard,P., Duckert,P. and Saxild,H.H.
  TITLE     Role of adenine deaminase in purine salvage and nitrogen metabolism
            and characterization of the ade gene in Bacillus subtilis
  JOURNAL   J Bacteriol 178 (3), 846-853 (1996)
   PUBMED   8550522
REFERENCE   4  (residues 1 to 191)
  AUTHORS   Lollier,M., Jaquet,L., Nedeva,T., Lacroute,F., Potier,S. and
            Souciet,J.L.
  TITLE     As in Saccharomyces cerevisiae, aspartate transcarbamoylase is
            assembled on a multifunctional protein including a
            dihydroorotase-like cryptic domain in Schizosaccharomyces pombe
  JOURNAL   Curr Genet 28 (2), 138-149 (1995)
   PUBMED   8590465
REFERENCE   5  (residues 1 to 191)
  AUTHORS   Jabri,E., Carr,M.B., Hausinger,R.P. and Karplus,P.A.
  TITLE     The crystal structure of urease from Klebsiella aerogenes
  JOURNAL   Science 268 (5213), 998-1004 (1995)
   PUBMED   7754395
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01979.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>191
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
     Region          1..>191
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
ORIGIN      
        1 mslmiknaha ilsglpgeaa rlagpdirir dgriaaigsl tplpeerlid ardcviypaw
       61 vnthhhlfqs llkgepqgln qsltawlsat pyrfraafde htfrlavrig lvellrsgca
      121 svadhnylyw pdmpfdtsei vfsegealgm rivlcrggat qgraveqdlp valrpetfdg
      181 ymadverlvs r
//
LOCUS       WP_257960505             946 aa            linear   BCT 02-MAR-2025
DEFINITION  ESPR-type extended signal peptide-containing protein, partial
            [Burkholderia pseudomallei].
ACCESSION   WP_257960505
VERSION     WP_257960505.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 946)
  AUTHORS   Leyton,D.L., Rossiter,A.E. and Henderson,I.R.
  TITLE     From self sufficiency to dependence: mechanisms and factors
            important for autotransporter biogenesis
  JOURNAL   Nat Rev Microbiol 10 (3), 213-225 (2012)
   PUBMED   22337167
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 946)
  AUTHORS   Desvaux,M., Scott-Tucker,A., Turner,S.M., Cooper,L.M., Huber,D.,
            Nataro,J.P. and Henderson,I.R.
  TITLE     A conserved extended signal peptide region directs
            posttranslational protein translocation via a novel mechanism
  JOURNAL   Microbiology (Reading) 153 (Pt 1), 59-70 (2007)
   PUBMED   17185535
REFERENCE   3  (residues 1 to 946)
  AUTHORS   Desvaux,M., Cooper,L.M., Filenko,N.A., Scott-Tucker,A.,
            Turner,S.M., Cole,J.A. and Henderson,I.R.
  TITLE     The unusual extended signal peptide region of the type V secretion
            system is phylogenetically restricted
  JOURNAL   FEMS Microbiol Lett 264 (1), 22-30 (2006)
   PUBMED   17020545
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024418.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13018.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..946
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>946
                     /product="ESPR-type extended signal peptide-containing
                     protein"
     Region          1..50
                     /region_name="ESPR"
                     /note="Extended Signal Peptide of Type V secretion system;
                     pfam13018"
                     /db_xref="CDD:463773"
     Region          <86..946
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
ORIGIN      
        1 mnkiyrkvwn kargqlvvas elassrssvg easvdagrsg drtasaafas eerkpgsgrm
       61 iplaiavalm fspyawagvg gadngvtgts nnggvggssg gggvqfsdmg vafvgdgdcs
      121 mltsgpgsya gvygsgsnyl gglfgfgaqt savgwgtpsn agansgivpy qgaaqtfgnv
      181 tyagngtqsg nftqafglns favgcgahat glsataigwg ttasgagsva lglystasgq
      241 gslafgtsat atatdtialg tlatanavsg vaigantqas aanataiggn ssganlgaqa
      301 taagataigg natagaaata tnaiaiggqs sakdandvav gvgaragtgs gagndlaign
      361 gatatggnsi aqgagasana agavaigksa saaggqavsi gvantasgng avaigdpnva
      421 tgtgavalgn ndtangqgav algnvstalg qgsvalgnss naaaaggval gdtasavmag
      481 glalgslata snandvalga gsktaaavat stvsvngany avagsgpast vsvgapgser
      541 titnvaagqv sagstdavng selyatnqai ttglstanss iaslststst glssansnig
      601 slstglsttn stvaslstst vaglnslstg lsttnsnvas lssststgls sansavasls
      661 tststglssa nsnidslstg lsttnstvas lststvagln slstglsttn snvaslssst
      721 stglssansa vaslststst glssansnig slstglstan stvaslstst vaglnslstg
      781 lsttnsnvas lssststgls sansavvsls tsastglssa nsnigslstg lsttnstvas
      841 lssststgig slstgvansv qydspahtsi tlggasatsp vkitnlaaga npsdavnyeq
      901 ltslstsast glssansait slstststgi gslstglstt nsnvas
//
LOCUS       WP_257960520            2682 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase, partial [Burkholderia pseudomallei].
ACCESSION   WP_257960520
VERSION     WP_257960520.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..2682
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..2682
                     /product="SDR family oxidoreductase"
     Region          <1..227
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(2..3,5,25..27,83..85,129..131,144,148,174..177)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(107,131,144,148)
                     /site_type="active"
                     /db_xref="CDD:187535"
     Region          300..379
                     /region_name="PKS_PP"
                     /note="Phosphopantetheine attachment site; smart00823"
                     /db_xref="CDD:214834"
     Region          <578..810
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
     Region          872..1243
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(948..949,952,1029,1062,1065,1102,1105)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:99741"
     Site            1105
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99741"
     Region          1288..>1825
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          <1841..2269
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          2137..>2664
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
ORIGIN      
        1 gagglglafa kdiaahvrra tivlagraaa pdaalsaslg aiarpagvdi ryrsvdvgda
       61 pavaalvgdl lrehgrlsgv ihaagvtrda llvrkpraef davlrpkvag aaalyaatqd
      121 idldflvsfs sivgvtgnlg qtdygaanaf ldalaglraq mggerrarvl siawplwrdg
      181 gmgresevaa hferafalap mdtaagidaf hralasdaay vvvangdadw tperaiaral
      241 sararpgape paerahgpar eaaaaaceav avsasslssp spssasasas vsaecaptdd
      301 gaarrhavva yltrqigavl ghapdsldid apftsygmds ilaldttrai etdlgslskt
      361 lffehenvrq lsdylldeha drlavcawfa qageparaag palaaggept retaapsaaa
      421 dttadttadt tadttadtta dttadttadt tadttadtta dttadttagt tagiaietst
      481 etptaattqa gpapegryrr vakaalpadg qlaaavaaig gaaatkgval feiwpelfvd
      541 saghgychll vdggvlfaaq hagdarhraa lfaallaycd rhgyafgyld lsegrkpdle
      601 aqcgllaapv gvvqiveaia sfslaggrmr rlrymverfr kagacrvvey rapdpdvare
      661 irrvicawsd akkvvnnvdi vlgemasgsl heryrvflty lddvlqnvim iardgdgylm
      721 dqeyyvadmp lggteyavte ilaalaaegr erfslgltwg lfdtgegssd paadaflast
      781 qtqlrrifer gaanrqyksk ygtrdhavyl yrrpgkpepa ivgclsqfyr kglthhevrr
      841 lagladapap apvsvpvaap atvpqvtpap apvatptade raydvtrida atirvdlvsd
      901 swahvdypfm raraatldrh apparggdpg ravaallgfa qcllttsgra aehlffrarr
      961 sartrvpqnl lfestlhnlv ksgfepvelp daraldpdsr dlfrggvdla aldrelqaha
     1021 datamvmlel cnnasggypv alaqiraiaa acrrhgvplv mdvtrivkna elirrgeagy
     1081 aqrglweivr eiadhadaiv gslckdfglg aggllaarda rvvanaagia rlegglpgpa
     1141 elrriaaafd draylereig rqldfardlh ielercavpv vqpgaghcvl vrvdqlappg
     1201 gsapsrgayl rllaerygvr gglhlvgnlr dshlnacvrl alplgfddpr gpgalaaala
     1261 aardgrdhal ddlmraprar aahggrcadg iaiiglsgry pdaptldafw rnlvsgrrsi
     1321 seipaerwdw rdhyerdpdt avahgksygk wggfldgfsa fdplffqiap reaefidpqe
     1381 rlfleacwha ledagcppsa ltraqrakag vfggmtkqgf nlygaggaqp yqstslaalv
     1441 nrvshcfdfn gpavafdshc asalvaihea cqylrrepeg iaiagavnln lhpsnyqqls
     1501 kmqvlasgae sasfasgglg yvpgegvgav vlkdyrrale dgdpiygvir gsavnqngrm
     1561 nrfgmpsqkq qeavvraala qagvdprsit yveasahgsa vgdaiemaal trvfgarera
     1621 dgryrigsvk pnighgeavs gmsqltkvll slrhgqlppt lvcgapnpdi dfdalpfeln
     1681 tsltdwarar vdservprra gitstgasgl nahlvleeha apavpaqagp geadarahvf
     1741 vlsardrarl ddyardwiaf lnddpqrdla aiaytlqvgr epmacrlavv aadcrdlagk
     1801 larwreaaha dcddvfhgea raaagkphre aardareprd varawvggav vdwaarhaga
     1861 rparvaglpg ypferrsywp gaaaalaaap atarataasd aseaaralea reaheatrat
     1921 rmtraarese arqapeapsm sevteateva eardarpgav addaaarlea aflprfielv
     1981 advfrlpage ldadrpldey ginsflikvl nvrfadivgr vsstlpfeyr tagelarhfl
     2041 tahrdacaaw vafdgaaspg aadassappv paasasatpa tpatpatqat qatqatqatq
     2101 atqatqatgp tgepsrasag vpsgasssik rpgatwdepi aivgvsgryp qardldafwd
     2161 nlmrgrdsit eipperwpld gfydedrera igasrsyakw ggfidgfaef dpqffnlspr
     2221 easnmdpqer iflqacweal edaaytrari arehggrlgv fagitraefc lygagnlkqg
     2281 kapftsfcsl vnrvsyflda ngpsipidtm cssslvavhe acdklrlgec evalaggvnl
     2341 slhpymyvsl saqrmlssdg rcksfgfggn gyvpgegvgv ivlkplsral adgdrihati
     2401 ratsinhggk tngytvpnpi aqqnvirsal dragvharav syveahgtgt elgdpieiag
     2461 lsgafrrdts drgfcaigsv ksnighleaa sglagltkvl lqmkhgllvp slhaselnpn
     2521 idfpaspfvv nretrawerp vidgrehpri agvssfgagg tnahvileep prqasparap
     2581 tpagapaliv lsakkpeqlr ryasellarl rdadyrarvd adglrslayt lqvgreamde
     2641 rlaviadsvq alegklrqfv dgktdiqdlh vsrvgrsahh vi
//
LOCUS       WP_257960527             149 aa            linear   BCT 02-MAR-2025
DEFINITION  TraR/DksA C4-type zinc finger protein [Lysinibacillus capsici].
ACCESSION   WP_257960527
VERSION     WP_257960527.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 149)
  AUTHORS   Perederina,A., Svetlov,V., Vassylyeva,M.N., Tahirov,T.H.,
            Yokoyama,S., Artsimovitch,I. and Vassylyev,D.G.
  TITLE     Regulation through the secondary channel--structural framework for
            ppGpp-DksA synergism during transcription
  JOURNAL   Cell 118 (3), 297-309 (2004)
   PUBMED   15294156
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01258.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..149
                     /product="TraR/DksA C4-type zinc finger protein"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=16732
     Region          4..147
                     /region_name="zf-dskA_traR"
                     /note="Prokaryotic dksA/traR C4-type zinc finger; cl00755"
                     /db_xref="CDD:445081"
ORIGIN      
        1 mdqqvmqqlk rqleqelqei eqrieeserp qatelsnydn hpadnasdlt dqltemaide
       61 hrgenaeeik ealqamadgt ygnctvcgke ipigrleamp qaltcvehae kkednlrpve
      121 edvlsstpks ddfieleefg ssdtpqdki
//
LOCUS       WP_257960535             356 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Lysinibacillus capsici].
ACCESSION   WP_257960535
VERSION     WP_257960535.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019581.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07969.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..356
                     /product="amidohydrolase family protein"
                     /calculated_mol_wt=39846
     Region          40..348
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
     Site            order(55,57,189,216,268)
                     /site_type="active"
                     /db_xref="CDD:238634"
ORIGIN      
        1 mtryinglvf nsetrsfnkq sfqvqgqyfe pathspetel dldgyyitpg fidscsqigl
       61 aeigirwegd dsyefdshlq ysvvdgiypf dtafqkavsh gvtashivps pksligakta
      121 iihhthttvd emviskdvay sfsighqaks tffaekkkpl trmgiakilr etlqqiqqqe
      181 psitkivira hkavdlefis rlqqefasif dfhiihgtei tflhetsfnt viagptfryi
      241 ehnemmalsp klyhqlykhs ipfvfctdhp vsstshltle gclavregma rqdvlyaltt
      301 gaanflgiah ltgaihdgll adfviwdkhp lnldaqvvat yikgtkvyar eegftq
//
LOCUS       WP_257960551            1049 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA translocase FtsK [Lysinibacillus capsici].
ACCESSION   WP_257960551
VERSION     WP_257960551.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 1049)
  AUTHORS   Massey,T.H., Mercogliano,C.P., Yates,J., Sherratt,D.J. and Lowe,J.
  TITLE     Double-stranded DNA translocation: structure and mechanism of
            hexameric FtsK
  JOURNAL   Mol Cell 23 (4), 457-469 (2006)
   PUBMED   16916635
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036827.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17854.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..1049
                     /product="DNA translocase FtsK"
                     /calculated_mol_wt=117642
     Region          <175..>573
                     /region_name="rad2"
                     /note="DNA excision repair protein (rad2); TIGR00600"
                     /db_xref="CDD:273166"
     Region          540..1044
                     /region_name="FtsK"
                     /note="DNA segregation ATPase FtsK/SpoIIIE or related
                     protein [Cell cycle control, cell division, chromosome
                     partitioning]; COG1674"
                     /db_xref="CDD:441280"
ORIGIN      
        1 mnwfkkqisk finkededye yeeyyedyge vqseqlhtqk eppiakqktf rfplidddeg
       61 easythskem fdqmedddyg qigdlslpkh lnhhivdssv ydvevsgird llanrskrtg
      121 rktmmksqps eqefrsrasl vfrdaqneta tispmtapap keksqrkeqk venimpenrk
      181 rfvptdvpsp vygfakpspi kdlldkrkee yekqetdvqa vervtvakpl keattnevne
      241 nileekepas tnqtvltehh eiiqskelst vsepiifeee llveenddke nlssnvavpq
      301 ttsfamdfeg qekeavvqdq tvqqlsadqs eihvkemive qvqienstih igevtvvqps
      361 mddqspdtas reeksripfn vlmlktdkek wriqqqlkma qqpirvesmp eteknklvdv
      421 mpekssslds mttnemsvsp peddndfhms etvqlqvdgp vqlevkdeve svpttssaee
      481 piavitmapv tsmssistne rieiekaaad eisatiepel elepelelss erdqvsepel
      541 aiepevvsei veyapvesve nqvasqevev eaeipakpvh vyqkptdeyl eppeektqdt
      601 dwmeqqgdtl vealsyfqvs aqiesimqgp avtqfeitvs hgtkvskirn laddlklala
      661 akdiriqapi pgkssigiei pnrvsravrl sevtnsasfv esdspleaal gldltgkpvt
      721 ldlrkmphgl iagatgsgks vcinsilvsl lykaaphelk lmlidpkmve lapfnhiphl
      781 vspvitdvka ataalkwave emerryqlfa hagarditrf naiadknneh slklpyiliv
      841 ideladlmmm spadveeaic riaqkaracg ihlivatqrp svdvitglik sniptriafa
      901 vssqidsrti ldgqgaerll grgdmlylgn gmsapvrlqg tfvtddeies iiehvreqge
      961 pdyifdqeel lkktevsaeq ddlfedvcrf vyeqggasts liqrkyhigy nraarlidml
     1021 eshgfvsear gskpresyit eedlitmfe
//
LOCUS       WP_257960579             274 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein
            [Lysinibacillus capsici].
ACCESSION   WP_257960579
VERSION     WP_257960579.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 274)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..274
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=30690
     Region          42..271
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mkkisfylll vlaalltaca nsektvgdts aqktaqsgkd vqkiivgtgt qfpnicfldd
       61 kgnltgydve lvraideklp eyefefktme fsnlllslet rkidfiahqm evnsereekf
      121 lfnkepynvf plkvtvnekn naiqsiedlk gknvsvspts nsavfiekyn kehnlganiv
      181 yssgsvdvnn qlatgridai ittpfavryy nesneaqqkv vgdallnskv yfllnkdevk
      241 lqerldeaiv elknegvvse lskkwlgddy tvdf
//
LOCUS       WP_257960644             227 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Lysinibacillus capsici].
ACCESSION   WP_257960644
VERSION     WP_257960644.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 227)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 227)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..227
                     /product="VOC family protein"
                     /calculated_mol_wt=26020
     Region          1..116
                     /region_name="CatE"
                     /note="Catechol-2,3-dioxygenase [Secondary metabolites
                     biosynthesis, transport and catabolism]; COG2514"
                     /db_xref="CDD:442004"
     Region          136..190
                     /region_name="TxDE"
                     /note="Toxoflavin-degrading enzyme; pfam18711"
                     /db_xref="CDD:436684"
ORIGIN      
        1 mkitkvklyv hdmqkmeqfy vdllgftlle rtadyftiav gesrmtfekm pskmpkqyhf
       61 alnipsnlfq qakiwveehv glldsegqde vyfeflkaya cyfydpegni veliarqein
      121 pkhaevnfsv eqvlhigein ltsddiqtia eklkkyainp iankeiqldg lnflgnyedg
      181 anillgpsgr lwyfsdkkav ispisieide alqlnmdeeg qlkllql
//
LOCUS       WP_257960675             285 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Lysinibacillus
            capsici].
ACCESSION   WP_257960675
VERSION     WP_257960675.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 285)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 285)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 285)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 285)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 285)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 285)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 285)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 285)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 285)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..285
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=33559
     Region          132..280
                     /region_name="Nucleotidyl_cyc_III"
                     /note="Class III nucleotidyl cyclases; cl11967"
                     /db_xref="CDD:448371"
     Site            order(171..176,214)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143637"
     Site            order(171,214)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143637"
ORIGIN      
        1 mrltmnrnra iliygsilil llqipayfll rqdaegylly lflmllivlt lwrgmvfgli
       61 sslififitg stllytgitg tmtflnpsfs mqffflygiv llllilcagk vhelmteqas
      121 yikklqedvr nyvaidvetg fdnetrmrit vneemrradr hkhtfvfiil klenydqfqk
      181 lygakevqhl wqqlsqrihq tvrqtdkkfr frknhiglll idttdqymev iynkldqalk
      241 nhqllngkwv tlnyktsfyt ylpltestfd eilsdlerem ktnal
//
LOCUS       WP_257960714             371 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Lysinibacillus capsici].
ACCESSION   WP_257960714
VERSION     WP_257960714.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 371)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..371
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=39399
     Region          4..367
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mtsrlveeff elvqidsetk heqliapilv dkltalgfsv iqddahtrng hgadniiatl
       61 kgtldvepiy ftshmdtvvp gkgikpslre dgyivsdgtt ilgaddkagl aalfemvkrl
      121 keqniahgdi efiitagees glvgakeldp anikakygfa vdsdgkvggi vtaapfqaki
      181 ftkiigktah agvapekgis aitvaskcia qmklgrldee ttanigrfeg gqatnivcde
      241 vtilaearsi dkakldaqtk hmqdtfeqva aslgaraeve vklmypgfrv tesdkvvqva
      301 maaarnidrt ptlgisgggs danviagfgi ptvnlsvgye dihttnekip veelekladl
      361 lveivkesak n
//
LOCUS       WP_257960781             625 aa            linear   BCT 02-MAR-2025
DEFINITION  M66 family metalloprotease [Burkholderia pseudomallei].
ACCESSION   WP_257960781
VERSION     WP_257960781.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 625)
  AUTHORS   Lathem,W.W., Grys,T.E., Witowski,S.E., Torres,A.G., Kaper,J.B.,
            Tarr,P.I. and Welch,R.A.
  TITLE     StcE, a metalloprotease secreted by Escherichia coli O157:H7,
            specifically cleaves C1 esterase inhibitor
  JOURNAL   Mol Microbiol 45 (2), 277-288 (2002)
   PUBMED   12123444
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021945.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10462.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..625
                     /product="M66 family metalloprotease"
                     /calculated_mol_wt=64919
     Region          <13..131
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          130..437
                     /region_name="Peptidase_M66"
                     /note="Peptidase M66; pfam10462"
                     /db_xref="CDD:287440"
ORIGIN      
        1 mlaacggdds anaptaggaa pltpavaspa gptgstpgat tapapsstsa gqlsvdkmaf
       61 aqthvvpsgg lswtlpnasa slrpisrrda lvlvaigqad aaqpvleawk dgaklgalal
      121 sppsalppte sggrayandr wsavvpaawm vpgvsfsvsa snytssvaqa pvfgtdadvq
      181 ltilpfylfg addtnsppls ttqapdaatq qeifakwpta elkvrthpag rfslatvvvg
      241 pradrtgaaq paypvtaldq qkdgygvmsa mltlitnmrt angdgplnnq yyaplialns
      301 ngqfanlggg lggvgsgaav gdhrytgifi heqghafgln hagdeyakga ypyaggslsg
      361 svwgydpnhr efldvlvptt assyakcass hqldaqgrcy kqdpmqggag dqssgykfat
      421 fsdyntgrmq awiasrvlad lasstgyskw dsaaqarapy tpttdnngly gvnqnlpvqa
      481 gvpvhtivvs fskagsagas yiyppfsytg nliatfdpts aadrqaitvd kgtypwyckg
      541 tgcdytlrvt yadgsrtyrv lqggfrawwt ptvddanatn plsgssfrvw ainvpgdkri
      601 gkielldtpm vwngmpanpt vllsr
//
LOCUS       WP_257960784             422 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Lysinibacillus capsici].
ACCESSION   WP_257960784
VERSION     WP_257960784.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..422
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=43345
     Region          30..419
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(37..38,41..42,45,77,130..131,133..135,138,157,
                     160..161,164,251,254..255,258..260,263,290,294,345..346,
                     350,354,370,373..374,377..378,381)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mveksqesia syiespeklk nlyrrvlivv slsqifggag laagitvgal laqqmlgtda
       61 yagvpsalft lgsagaafiv gklsqrygrr iglstgfivg glgaigvvla tlmnsivllf
      121 aslliygagt atnlqaryag tdlannkqra taisttmlmt tfgavlgpnl vewmgkvals
      181 igipalagpf llsalafima glvlftmlrp dpleiakaie ahkqkmnnen qtpsmpissn
      241 krglavgatv mvltqivmva imtmtpvhmk hhghglaevg ivigfhvgam ylpslvtgil
      301 vdkigrtams iasgitllla gvvaafapsd smvllivals llglgwnfgl isgtaqivda
      361 tepstraktq gkmdvfvala gasggalsgm vvanssyavl slaggllslv lipvviwsrr
      421 aa
//
LOCUS       WP_257960822             411 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: acyl-CoA dehydrogenase family protein
            [Lysinibacillus].
ACCESSION   WP_257960822
VERSION     WP_257960822.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus
  ORGANISM  Lysinibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 411)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 411)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 411)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Lysinibacillus"
                     /db_xref="taxon:400634"
     Protein         1..411
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=45659
     Region          7..400
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(105,135,137,169,171,382..384,386,388)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mnfsysekve klqdklknfm aqyiypneav yaaqveamed rwgaippime elkqkaqqag
       61 lwnlflpdse ygagltnley aplceimgrs llapevfncn apdtgnmevl vrygsalqkk
      121 qwlepllrge irscfamtep avassdatni easierdgde yilnghkwwt tgagdprcrv
      181 aifmgkhkdt tapiheqqsm ilvpmdtpgv kvermltafg ydhapeghge vtftnvrvpv
      241 enilwgegkg faiaqgrlgp grihhcmrli gaaeraleem cvrvqarqaf hrpladqgvm
      301 reriaesrmd ieqarlltlk aaymmdtvgn keakaeiami kvvapnmalr vidraiqafg
      361 aagvgpdttl aaqwansrtl rladgpdevh rntiaklelk khankqeelv k
//
LOCUS       WP_257960866             270 aa            linear   BCT 02-MAR-2025
DEFINITION  aminoglycoside adenylyltransferase domain-containing protein
            [Lysinibacillus capsici].
ACCESSION   WP_257960866
VERSION     WP_257960866.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 270)
  AUTHORS   Stern,A.L., Van der Verren,S.E., Kanchugal,P. S, Nasvall,J.,
            Gutierrez-de-Teran,H. and Selmer,M.
  TITLE     Structural mechanism of AadA, a dual-specificity aminoglycoside
            adenylyltransferase from Salmonella enterica
  JOURNAL   J Biol Chem 293 (29), 11481-11490 (2018)
   PUBMED   29871922
REFERENCE   2  (residues 1 to 270)
  AUTHORS   Chen,Y., Nasvall,J., Wu,S., Andersson,D.I. and Selmer,M.
  TITLE     Structure of AadA from Salmonella enterica: a monomeric
            aminoglycoside (3'')(9) adenyltransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 71 (Pt 11), 2267-2277 (2015)
   PUBMED   26527143
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024819.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13427.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..270
                     /product="aminoglycoside adenylyltransferase
                     domain-containing protein"
                     /calculated_mol_wt=31433
     Region          <32..>81
                     /region_name="NT_Pol-beta-like"
                     /note="Nucleotidyltransferase (NT) domain of DNA
                     polymerase beta and similar proteins; cl11966"
                     /db_xref="CDD:472251"
     Region          <197..258
                     /region_name="DUF4111"
                     /note="Domain of unknown function (DUF4111); pfam13427"
                     /db_xref="CDD:433197"
ORIGIN      
        1 mdskvpiqvq sflneylllf enqipntlda lylhgsialh ayiegssdid fiavvnrslt
       61 esdvkiisdl heklnqkykk tvmdgcylld kdfgkkqsei knclyvnegk tkwsndctnp
      121 itwwilknkg itikgsdvtt lvfnvdesil ieyfldnmnt ywlnrlktik kyktlalllp
      181 nkfvdmevew sitgmsrqfy tlrecdivsk vdaskyainh iperwhnlik eaisiregln
      241 iryykskkqr iddtiqfmny ildacnniek
//
LOCUS       WP_257960994             391 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Lysinibacillus capsici].
ACCESSION   WP_257960994
VERSION     WP_257960994.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 391)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 391)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..391
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=42497
     Region          1..389
                     /region_name="PRK07681"
                     /note="LL-diaminopimelate aminotransferase"
                     /db_xref="CDD:181081"
ORIGIN      
        1 mkivpskkms lftpaifgdl knfareqqak gmtlidlslg spdlpphaki rehlsyragl
       61 aesygytltg tqrfydavsr yykrrsnvdl dpateiiqti gsqeglvhlp iafcdsgdiv
      121 lstnpayvay dagihlagat pyympqtadn dylpdldavp eeiaqkakll ilnlpgnpvp
      181 ampslayfek viafakkyni ivlhdaayse fyftgdgpis flaapgakev gmeinslsks
      241 fslagtriay iagnaemiav ikqlksnldf gifepiqdaa vvaldnaeei teslratfse
      301 rhktlmnglq algweaapsd ggmfvwakyp yaidctelaf qlieqvgvvt vpgtvfgtag
      361 qgylrlalvq pkellqeavd rlakvqllak q
//
LOCUS       WP_257961010             984 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Lysinibacillus capsici].
ACCESSION   WP_257961010
VERSION     WP_257961010.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 984)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..984
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=114412
     Region          42..277
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          232..830
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
     Region          847..951
                     /region_name="PilZ"
                     /note="PilZ domain; pfam07238"
                     /db_xref="CDD:399904"
ORIGIN      
        1 mkkpnllkqf ftkeerphtv alttaqdhrl fsyamsfaky hpdmmivfsa dgeiiyvnqe
       61 alyellqyrp shaedfkkil tdvdykrlkr afnrtlrgks vkidierlqh qgqnlslvlt
      121 fipiknddnq aeglyliied mstysamkhq lmlhekhlny aqhiaavgsw eyfiqhdklf
      181 csdnfyhifg farsdndgid yvfqfihpdd yertydafnh arkgtnfdsd friyhgktne
      241 lrflqaaaev iwkddkpfkm igvvkdetaf kllektlndt lanyhsifdn ldagiwmrds
      301 irgnmlfask glegilgipl aklyddsevw inmihpahre evlaytdhla sgksyqviyr
      361 irtgenqtkw lleqivprld qqgevnhifg lvtditkeie rekklnylvy ydeltglpnr
      421 lslhdkvdtl clagepfall yisinrfhil nnalgtkigd ellrtvtnyf stltddhsym
      481 arldnqhfii vikkyvskqh iyalasrvlk tfdtpfsikd yhlhlsasig iafypeeglt
      541 rnillenays alcyakqqgr nrfhiyafte ditsykqyvl drdmrqamln eefelyfqpm
      601 vepqkgving aealirwhhk ewglvspgef iplaeenhmi hiitdwvikk acallqhwkq
      661 qghvlrtisi kispirlmkk gfiqfvqeql qvnsidahyi qfeisestil knstsvmtvl
      721 kelqdigvki aigdfgtgys sleslrtfqp ttlhiyeafi reirhdrpie nglisatiyl
      781 akmlgiqvva kgvesyeqfi flkqqecdyl qgsiytkavp akafekmlaq giltpqkaiv
      841 hkkpvverrk yyrfqfpayv kgfmtiiemn eqkinightp iiienislgg mkirsslklp
      901 vnqtmkfkfs filmnqsfnl egtfrwtlee kyqiysygva fnltqedegk lapiinrmta
      961 lhnhhekieg tpfmyediea yfkk
//
LOCUS       WP_257961006             675 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Lysinibacillus
            capsici].
ACCESSION   WP_257961006
VERSION     WP_257961006.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 675)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 675)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 675)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 675)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 675)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 675)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 675)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 675)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 675)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..675
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=78606
     Region          118..>381
                     /region_name="KinE"
                     /note="Sporulation sensor histidine kinase E [Cell cycle
                     control, cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG5809"
                     /db_xref="CDD:444511"
     Region          260..>668
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 meyilsedff nslfigkdfv flvkkvgddy qyirlnqaaq dllsneaigk mistvtskrn
       61 fliiqknyhe airehkqvdy vdyayvqsev rkyetsvrpl kyknedyila itkeilydrs
      121 iedkflfmrs mfdhaffstv ilsaegmiye vnssfmedfq ldnetvkqkm fvdlpiipke
      181 eveqikiclq kaargenvge kfiklhtldq qermyllsls pvmqddnsfa iflimqdftq
      241 ftlqkaelrs kshglevfks alnsataiav ldhncnitev semflqasgy taeeligqpy
      301 alieprfrgq dlfqiiedkl dtmgmwrgel cyrtkyhady wvettivplk defgqieqil
      361 tinyditdkk rmftelknie rtfrlitent ndlivitned giiiyaspsy giylgyenve
      421 lqgqfysdii dreskgewqt flnnytgqtd sqfelllkak dgtpiwtegn vtvvhdpere
      481 kvsqimmvsr eithrkeren dllylayhda ltqlpnrrfl ekefpkilae anenqtcvam
      541 lyidgddfke vndrfghetg dafiqrfgss lnktvrshdm viriggdefi viltgltrdq
      601 ekrhhqimhi irrirdelae gwmiedhlft ptasigiayy pehartldel mdladqalyk
      661 skesgknnls isdih
//
LOCUS       WP_257961013             257 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Lysinibacillus capsici].
ACCESSION   WP_257961013
VERSION     WP_257961013.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 257)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 257)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..257
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=29792
     Region          44..142
                     /region_name="ArgA"
                     /note="N-acetylglutamate synthase or related
                     acetyltransferase, GNAT family [Amino acid transport and
                     metabolism]; COG1246"
                     /db_xref="CDD:440859"
ORIGIN      
        1 mthhveliem nsellegkgs fclrskkkte gyqnknkwln qqfekglhyi qvlenqkqvg
       61 fieytdaeys srvvhadgyv vihclwvsav gkgygtqllk rclkdakerg kkgvvvitnd
      121 qtswtpnkdl flqhqfqhma talndfelwa fpfhesverp yfpdnwqerl trfphltilr
      181 sfqcpyvdva teniqlaaek lglqpvlvdl qtreelmeks ptpygifsvv ykgqliafhr
      241 ltvhsvykkl qklmnns
//
LOCUS       WP_257961072             327 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing protein [Lysinibacillus capsici].
ACCESSION   WP_257961072
VERSION     WP_257961072.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 327)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01966.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..327
                     /product="HD domain-containing protein"
                     /calculated_mol_wt=37739
     Region          1..255
                     /region_name="YdhJ"
                     /note="HD superfamily phosphohydrolase [General function
                     prediction only]; COG1078"
                     /db_xref="CDD:440696"
ORIGIN      
        1 mlisdplyge feidglleel ivskpvqrlk eihqagagfl vnsrwtisrf ehsvgvmlli
       61 rqlggslqeq vagllhdvsh tafshvvdvv leneaedyhe aifmdvikqs sipailekyg
      121 yevenildts rwslleqpap alcadridyt lrdmyfygnl alediqkflq dlfvfqgklc
      181 vktieraewf vkiyyqevld fflhplniya tsslanvlkl slakqiltle dflktdhevm
      241 qqmktshdqd vlallqqlhe nvevreeqen ydihfrnkvr lidpaiyhqq qlwkasevsn
      301 hvkamnvsal erfeqgvyvk iineels
//
LOCUS       WP_257961138             332 aa            linear   BCT 02-MAR-2025
DEFINITION  HAAS signaling domain-containing protein [Lysinibacillus capsici].
ACCESSION   WP_257961138
VERSION     WP_257961138.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 332)
  AUTHORS   Ravi,J., Anantharaman,V., Chen,S.Z., Brenner,E.P., Datta,P.,
            Aravind,L. and Gennaro,M.L.
  TITLE     The phage shock protein (PSP) envelope stress response: discovery
            of novel partners and evolutionary history
  JOURNAL   mSystems 9 (6), e0084723 (2024)
   PUBMED   38809013
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046861.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22564.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..332
                     /product="HAAS signaling domain-containing protein"
                     /calculated_mol_wt=37775
ORIGIN      
        1 mnlteiyiqe vtrrlpeknr edialelrst igdmlpddyn ehdvnevlek lgnpatlasg
       61 yrdqpmhlig pryfdvylsl lkmiipiaav iavismiaey fisfggeeev mnavlnvmge
      121 giwriievgi hvffwltvvf vilertdkgk eqhplsaslk kwtpedlktv iyipkkkait
      181 klevfgylmw taiwatfyfy anhllgiyed ggeglefvmp alnqdvllhy wpivivvial
      241 eiglalykll kgqwtkkvai fntivelfat vvfivivsnp tlmnqesiay msnlfttstk
      301 qfeiwliggi iiifvvsaai sifdgfrkar ir
//
LOCUS       WP_257961189             238 aa            linear   BCT 02-MAR-2025
DEFINITION  toast rack family protein [Lysinibacillus capsici].
ACCESSION   WP_257961189
VERSION     WP_257961189.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028425.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17115.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..238
                     /product="toast rack family protein"
                     /calculated_mol_wt=25248
     Region          39..128
                     /region_name="Toast_rack_N"
                     /note="N-terminal domain of toast_rack, DUF2154;
                     pfam17115"
                     /db_xref="CDD:407253"
     Region          139..232
                     /region_name="DUF2154"
                     /note="Cell wall-active antibiotics response 4TMS YvqF;
                     cl41858"
                     /db_xref="CDD:477831"
ORIGIN      
        1 mkklvglgvv igtsalvlsg cfsfipnkmr eeailvekdk akalevdidl gvgemnvssg
       61 akewvegnae ynvkklapqv dydlhgdtge veikhkgstr lglsnikntw aiqlndsipm
      121 dlnvetgasl anldlqglql ekldieagvg dltvnlggdw kksftttiet gvgqttvilp
      181 skvgvkltte kgigssnveg ltskgngvyv neaydkadvv levnselgig eitfkldr
//
LOCUS       WP_257961310             212 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF2975 domain-containing protein [Lysinibacillus].
ACCESSION   WP_257961310
VERSION     WP_257961310.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus
  ORGANISM  Lysinibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022636.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11188.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Lysinibacillus"
                     /db_xref="taxon:400634"
     Protein         1..212
                     /product="DUF2975 domain-containing protein"
                     /calculated_mol_wt=24061
     Region          87..211
                     /region_name="DUF2975"
                     /note="Protein of unknown function (DUF2975); pfam11188"
                     /db_xref="CDD:463239"
ORIGIN      
        1 mgqtiqskef rwmtkglrta ftiimvmmif vltmlaifmv gamvvseqqv nhllakgsvt
       61 aavqleglem kladhvtrdi hyskkdvmtf lftatiyiai llmiivqvrn ilsnlskgiv
      121 fslanskkme riaycvivls ltvnafrtyt vylimqqfql esrfvetgli kgisyhftgi
      181 hwtlllcgvv iwtfarifry gaflqdeyda ta
//
LOCUS       WP_257961536             603 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Lysinibacillus capsici].
ACCESSION   WP_257961536
VERSION     WP_257961536.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..603
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=65648
     Region          <40..176
                     /region_name="DdpA"
                     /note="ABC-type transport system, periplasmic component
                     [Amino acid transport and metabolism]; COG0747"
                     /db_xref="CDD:440510"
     Region          218..>598
                     /region_name="DdpA"
                     /note="ABC-type transport system, periplasmic component
                     [Amino acid transport and metabolism]; COG0747"
                     /db_xref="CDD:440510"
ORIGIN      
        1 mkkllvflfv avlalagcvq tktdvegskd skdsdksngk vaievlgmaa seedmnivrd
       61 qlvkngfdvk lniqpdygsf saqkeagnyd lalsswttvt gnpdyavrgl fktggdysvv
      121 adskldalid eastltgeea aakykdleql lvfdqayiap lyisnkyqgi yselvnpktv
      181 llpksraqvw ekiefndtsk nateplilhq tinsltsldp ikgndgsint lntnmyvrlv
      241 nltdtdevvs dgslsynhvm aegnqeyyfi lrddinfaav kdgaavntge ivsaedvvfs
      301 lnrakdansv pdhrtysihe nietveivsd ltelqnkkva gseqsvleal sqnlpasvaq
      361 lakdkgavnn aagayqvvki ttptpfpqvl nylahqsggi vsekqvtsin tydvanynpd
      421 kdiaygdqat vtegsatfnn qlyasgpyil vkkndfeaqf vknpayrags eyepkiakin
      481 vrfisdvdsa lsalrngeih vlqtvpetkl divksdaklt lntadsnavs ylqmntsgra
      541 vsdsadlrka ilysinqdef isyyqgnkkp avstvsplid tglkleadse kvkelvkayn
      601 dkk
//
LOCUS       WP_257961553             864 aa            linear   BCT 02-MAR-2025
DEFINITION  VWA domain-containing protein [Lysinibacillus capsici].
ACCESSION   WP_257961553
VERSION     WP_257961553.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 864)
  AUTHORS   Bork,P. and Rohde,K.
  TITLE     More von Willebrand factor type A domains? Sequence similarities
            with malaria thrombospondin-related anonymous protein,
            dihydropyridine-sensitive calcium channel and inter-alpha-trypsin
            inhibitor
  JOURNAL   Biochem J 279 (Pt 3) (Pt 3), 908-910 (1991)
   PUBMED   1659389
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012321.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00092.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..864
                     /product="VWA domain-containing protein"
                     /calculated_mol_wt=95062
     Region          <68..184
                     /region_name="ChlD"
                     /note="vWFA (von Willebrand factor type A) domain of Mg
                     and Co chelatases [Coenzyme transport and metabolism];
                     COG1240"
                     /db_xref="CDD:440853"
     Region          <401..576
                     /region_name="YfbK"
                     /note="Secreted protein containing bacterial Ig-like
                     domain and vWFA domain [General function prediction only];
                     COG2304"
                     /db_xref="CDD:441879"
     Region          <592..818
                     /region_name="COG5426"
                     /note="Uncharacterized protein STM3548, contains class I
                     glutamine amidotransferase domain [General function
                     prediction only]"
                     /db_xref="CDD:444178"
ORIGIN      
        1 mdlridmplv lllllplfly fgwtyfherq rlkrshivvl tirivaagcl vfalagpyll
       61 lpikeeqivy lvdrsasmng tedemvqfiq eslqskkepq lagiysfsst lqteailskt
      121 lkevpkltei katdqtnieq slqlasgiid pkkatrlvll tdgnetkgda lefatklkgs
      181 nisvdikpfs qpvvndvslk sfvspqvayv geqqqlvtdi hatsagqgel llyendelih
      241 reaveltegt nvftykhaat aeglvkyeav vqvgqdaife nnkltsvtmv qsephllivn
      301 gyetaspiaa algsqsiayd vvapkslpne lssylqynai vfdnvpghlv geakmsvieq
      361 avknfgvgft mvggensfgl ggyfktpiet llpvemeikg keqlpslglv ivldrsgsmq
      421 gsklelakea aarsvemlrd edtlgfiafd drpweiietg plsskeeavd tilsvtpggg
      481 teiysslaka yenladlklq rkhiilltdg qsqagnyedl igegkeegit lstvaigqda
      541 danllealsd mgsgrfydvi deqtipsils retamisrty iednpfypai ynaagwnslf
      601 angvpqmnay igttakqgat vvaesekedp vlaqwqyglg ktfaftsdst gkwtgdwarw
      661 qnwgafwqtl isqmlpsynd vaydvrlead gsfmitdptn eaafldivav neageeletq
      721 letisasqvr avvqaepgli ffriadekqa iyqaglsvpy saeyellpvn nqlieeltqr
      781 tggtvlkepq dvfrdfttkg adrqniatwl llasmllffi ditirrfgwn fltnakkkep
      841 lveektiped tnvaqllkgm kkrs
//
LOCUS       WP_257961447             356 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Lysinibacillus capsici].
ACCESSION   WP_257961447
VERSION     WP_257961447.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 356)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 356)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..356
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=41029
     Region          4..172
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(59,61,63..64,124..125,145,172)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 mlsveilggv geygrncfyi enqrqailld cgimkntqkt ppnitfnhie klaavfishs
       61 hidhvgalpi lqnmgytgpi lmshttaqql pllipqvrtf ypdtigkwie ineylafqwg
      121 ysghligsvw ykirffdemi ffsgdyvvds yllkatlpee dgtvydvafi dsghaekcir
      181 nlevleqmam yvkahpnhsf ifpssfsgkt vdimtylseh ttrairvdak lqpllahyde
      241 eheniwpnkv mllerlkqkq dsdhvlyfvs eqdvaqveal vkdyptaifv htgysrhayn
      301 paslkhisee ffykthpdyw dlvalsqrlr arqtiyfhst htnltttfpk eelkrd
//
LOCUS       WP_257961596             640 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: N-acetylmuramoyl-L-alanine amidase [Lysinibacillus].
ACCESSION   WP_257961596
VERSION     WP_257961596.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus
  ORGANISM  Lysinibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 640)
  AUTHORS   Kuroda,A., Sugimoto,Y., Funahashi,T. and Sekiguchi,J.
  TITLE     Genetic structure, isolation and characterization of a Bacillus
            licheniformis cell wall hydrolase
  JOURNAL   Mol Gen Genet 234 (1), 129-137 (1992)
   PUBMED   1495475
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013670.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01520.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Lysinibacillus"
                     /db_xref="taxon:400634"
     Protein         1..640
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /EC_number="3.5.1.28"
                     /GO_function="GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=70227
     Region          37..81
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          101..142
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          164..204
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          237..360
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          311..442
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          451..639
                     /region_name="AmiC"
                     /note="N-acetylmuramoyl-L-alanine amidase [Cell
                     wall/membrane/envelope biogenesis]; COG0860"
                     /db_xref="CDD:440621"
ORIGIN      
        1 mnikkislil cvlfisasmf tihsasvsaa nnsnitfedv tknhpayeei nylvnlgviq
       61 gyfvngkrvf gpnnsvtrgq aakmvvvasg nkplvvnkss fsdvtvgtem sgyieravql
      121 gffdknikgq flpnkpltrg emsyvltkaf nldtseyegi dspftdvgit heyvkyinti
      181 yyngitngtg ntylpnstvt rsqfslfvar ansekyrlel pvkgvqvpdt sqviglvkvt
      241 tdglnirktk dstsstnivg kvntggklsv yavesnwlkv tykgayayiy kqyaefvdad
      301 gnalgtveke vttknavnly vkptssakvi ssikaneklp vyktiggyyl tqvnglpgyi
      361 vansttdive eekpnpnpnp dptppasgdv lgrvtvanln vrsqsnstsa vlfklnkgey
      421 vqvnnisgyw aeityngqsg yvhksylkll nqtakplqnr iiildpghgg kdpgtvkgsa
      481 seknitlkvs tqvkqllena gakvymtrtg dtypslqdrv dftqanygei fvsvhvnsaa
      541 ntsasgtety yaistgdmyq edidlatyvn nqivnnlnmk nrgvkqeqyy virnmvipsi
      601 lvelgfltna ednskmtndq yvklfaesiy ngilqyykkq
//
LOCUS       WP_257961604             616 aa            linear   BCT 02-MAR-2025
DEFINITION  S-layer homology domain-containing protein [Lysinibacillus
            capsici].
ACCESSION   WP_257961604
VERSION     WP_257961604.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 616)
  AUTHORS   Mesnage,S., Fontaine,T., Mignot,T., Delepierre,M., Mock,M. and
            Fouet,A.
  TITLE     Bacterial SLH domain proteins are non-covalently anchored to the
            cell surface via a conserved mechanism involving wall
            polysaccharide pyruvylation
  JOURNAL   EMBO J 19 (17), 4473-4484 (2000)
   PUBMED   10970841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012613.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00395.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..616
                     /product="S-layer homology domain-containing protein"
                     /calculated_mol_wt=67392
     Region          27..65
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          84..125
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          147..189
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          <201..461
                     /region_name="LytD"
                     /note="Beta- N-acetylglucosaminidase [Carbohydrate
                     transport and metabolism]; COG4193"
                     /db_xref="CDD:443347"
     Region          489..608
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
ORIGIN      
        1 mkrkfplyga vlagmlylap ttasaedisk hwayhemnyl itndlmkgde fghyrpndav
       61 traefaaflv rtlnlpaass qatftdvkkg dwyygvveqa syhglikgde qgkfhpnhhi
      121 nrqemaamlk raltyqnint ssspiafsdn ariakwayad vqavvttgll vgkpnnqfap
      181 laqttraeaa tvlyrlihle apgtggkqym ttnyshdyss vvskqtmnnp kvdgagifta
      241 sealvsyyvh pksfmqdsps yyqflklstv vnnlsakeln dkvlankgsl agtadafiqa
      301 gidnkinaiy lvshalheta nggsalikgi evgldtngkp mvatpenrdk ltaikttyna
      361 ygigaidada nkygaerayt ngwftvqdai iggaqfvkdq yisrgqdtly kmrwnpdnpt
      421 vhqyathvmw aviqakkiyd iyeligahtt tnlvfdvpay qsqssapslp spskqyaldl
      481 glagatgktt inlnmrtypn tadnasiitn lpkdtsfkvl genggwlkvs vngqegwvid
      541 dyvslenglq ivnmnitlnv rsepsttsai lgtvkpngfi igvvddkgef ikngawyqvl
      601 yngktgwvhg dyivkk
//
LOCUS       WP_257961691             254 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: 3D domain-containing protein [Lysinibacillus].
ACCESSION   WP_257961691
VERSION     WP_257961691.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus
  ORGANISM  Lysinibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 254)
  AUTHORS   van Straaten,K.E., Dijkstra,B.W., Vollmer,W. and Thunnissen,A.M.
  TITLE     Crystal structure of MltA from Escherichia coli reveals a unique
            lytic transglycosylase fold
  JOURNAL   J Mol Biol 352 (5), 1068-1080 (2005)
   PUBMED   16139297
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06725.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Lysinibacillus"
                     /db_xref="taxon:400634"
     Protein         1..254
                     /product="3D domain-containing protein"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /calculated_mol_wt=26803
     Region          <31..122
                     /region_name="PRK06347"
                     /note="1,4-beta-N-acetylmuramoylhydrolase"
                     /db_xref="CDD:180536"
     Region          <79..124
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
     Region          163..254
                     /region_name="COG3584"
                     /note="3D (Asp-Asp-Asp) domain, usually in lytic
                     transglycosylases [Function unknown]"
                     /db_xref="CDD:442803"
ORIGIN      
        1 mkkralalav vltfgvslya spsfakdksp gnllwalpqi ynltvgefqq lnekdslwfy
       61 peqdlvkdts kaeeplgdey vikggdtlfs iarinnvtvd dlkkwnhlas dlilagesia
      121 ikasaakpkp ktsggiatat kpaapaktkp asapatvsgk tltmratayt aycegcsgit
      181 angtdirsnp nlkviavdpr viplgtkvwv egygeaiaad tggaikgnki dvfiptegqa
      241 lqwgvktvtv kiln
//
LOCUS       WP_257961692              61 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: putative motility protein [Lysinibacillus].
ACCESSION   WP_257961692
VERSION     WP_257961692.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus
  ORGANISM  Lysinibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 61)
  AUTHORS   Serizawa,M., Yamamoto,H., Yamaguchi,H., Fujita,Y., Kobayashi,K.,
            Ogasawara,N. and Sekiguchi,J.
  TITLE     Systematic analysis of SigD-regulated genes in Bacillus subtilis by
            DNA microarray and Northern blotting analyses
  JOURNAL   Gene 329, 125-136 (2004)
   PUBMED   15033535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025436.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14070.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..61
                     /organism="Lysinibacillus"
                     /db_xref="taxon:400634"
     Protein         1..61
                     /product="putative motility protein"
                     /calculated_mol_wt=6645
ORIGIN      
        1 mevnslmssq lmelqqtvqm svmqnalsln tttaiellke lpqqqtapth pykgsiidis
       61 i
//
LOCUS       WP_257961769             436 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Lysinibacillus capsici].
ACCESSION   WP_257961769
VERSION     WP_257961769.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 436)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..436
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=51077
     Region          3..121
                     /region_name="REC_YesN-like"
                     /note="phosphoacceptor receiver (REC) domain of YesN and
                     related helix-turn-helix containing response regulators;
                     cd17536"
                     /db_xref="CDD:381091"
     Site            order(8..11,14..16,19,104..105)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381091"
     Region          49..244
                     /region_name="PRK10955"
                     /note="envelope stress response regulator transcription
                     factor CpxR"
                     /db_xref="CDD:182864"
     Region          <349..432
                     /region_name="AraC"
                     /note="AraC-type DNA-binding domain and AraC-containing
                     proteins [Transcription]; COG2207"
                     /db_xref="CDD:441809"
ORIGIN      
        1 mnlfiveden fireglsffi nrnfieslrv ysyttgedml laakeiapdi vlsdinlpgi
       61 sgieavqelk kfhqfkvifl sgyddfqylq saiqigaedy ilkpidyknl klklsqtmea
      121 lsmkkqvdya ikynqllnll lafdqqmtdc siysfeyfmv sinqtknigi shahelfyfn
      181 ifgehieimn tdfvlsysqh nyivlpkkdl hdlnqavlel llkrhlntds tvlnkrksif
      241 dnqiftdelk lkefivvlqn inidfqqrle imimfllqys iyfncletyh raqkiigiqh
      301 qmikeanlsk ivnnyimplv dkilnlhgnr dnlgkkivdy iythfddpql dlnylsnifn
      361 ksqanlsili kksidknfih llnelrinka kqlldysdkr nneiallvgy sneeyfskvf
      421 kkyvgmtpak yrsikk
//
LOCUS       WP_257961830             254 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Lysinibacillus capsici].
ACCESSION   WP_257961830
VERSION     WP_257961830.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..254
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=26850
     Region          4..254
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(13,15..16,18,37..39,97..99,145..147,160,164,
                     190..193)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187620"
     Site            order(121,147,160,164)
                     /site_type="active"
                     /db_xref="CDD:187620"
ORIGIN      
        1 mgkltgkial vtgssrgigr sialrlaqeg afvivhygkr rteaeavvhq ieqsggnala
       61 igadlstldg iqdlfttldd tireymggsg fdilvnnagi gqiisleett eesfdevmki
      121 nvkaplfvtq qalprlkdgg riinissfvt raaspsvfty smskgaidtf trllakqlgs
      181 rnitvnaiql giintemnae tlknldgqky aaglsifnrw gepgdvadia aflassdsgw
      241 vtgqlldasg gshl
//
LOCUS       WP_257961879             316 aa            linear   BCT 02-MAR-2025
DEFINITION  proline dehydrogenase family protein [Lysinibacillus capsici].
ACCESSION   WP_257961879
VERSION     WP_257961879.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 316)
  AUTHORS   Ling,M., Allen,S.W. and Wood,J.M.
  TITLE     Sequence analysis identifies the proline dehydrogenase and delta
            1-pyrroline-5-carboxylate dehydrogenase domains of the
            multifunctional Escherichia coli PutA protein
  JOURNAL   J Mol Biol 243 (5), 950-956 (1994)
   PUBMED   7966312
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013761.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01619.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..316
                     /product="proline dehydrogenase family protein"
                     /calculated_mol_wt=36633
     Region          31..>282
                     /region_name="PutA"
                     /note="Proline dehydrogenase [Amino acid transport and
                     metabolism]; COG0506"
                     /db_xref="CDD:440272"
ORIGIN      
        1 mkkteelviq alkaaarder lkyavqqste lypllwkaak ryvtgekred aiaaarnyln
       61 dnynisieyi genttnlrdc qsakdellqv iedmgilslk qtvsfdlshi glsinaeiay
      121 khleeltqka qqygitlmis meessktsdi itlykkiate ytnvgitlqv qlyrtktdlq
      181 elmqypgkir lvkgafqesv diamirseel nkrylayvdq lvnanhplsi athdemliqe
      241 ierrqylenp nvevemlygv rptllnelrr kdyrcrvylt ygnewflylc hriaehpenl
      301 ylavtdiine smervv
//
LOCUS       WP_257961947            1231 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6079 family protein [Lysinibacillus capsici].
ACCESSION   WP_257961947
VERSION     WP_257961947.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039983.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19557.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1231
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..1231
                     /product="DUF6079 family protein"
                     /calculated_mol_wt=142274
     Region          1..1230
                     /region_name="DUF6079"
                     /note="Family of unknown function (DUF6079); cl38946"
                     /db_xref="CDD:476826"
ORIGIN      
        1 mqykdlvqye piesiikltd aneeahannl iktyviserm aeqlndfiie qlqfsraren
       61 mglfivgnyg tgkshlmsvi stiaerenss qyiskpsvae kakeiegkfk vmrvefgavq
      121 tplrdilvhe lekhlekwgi dftfppidqi tnnknsleem mglfnekype hgllivvdel
      181 ldylrsrkeq eitldlgflr eigeiasktr lrfmagiqem lfdnpsfsfv adpirrvker
      241 feqvrivred iahvvserll kktdeqksli rehfskftsl ynrlnedmet yvnlfpihpa
      301 yldtfekvrs vekrvalkti slemakvled tvptdapgli sydsywkfie edpsyksnpd
      361 vkevldkakt ikdrvqnamk kpiykpislr iinalalyrl atsdiydkvg ltaeelrdel
      421 fltppggidl fsdlddasdf lksnievaik hiqdtvsfqf lssnesngqy yldlkkdidv
      481 dsliqqkaek ieddkldryy ydllkqvitl ddntyvsgyk iwrhnlpwda hrvkrqgylf
      541 fgapnersta qperdfyiym lrpylkanfk defksdeiff qlketnedft qllrkyaaan
      601 dlktdataat knlysskins yfkdltkwlt infvhnfeit ykgkkatvle ygiflpanat
      661 vqeiinvvae giltdwfeek yedypcfgqi etsylsseni ngyvtnaley ligketkqgs
      721 ailnglvlld angkistkqs gyarwitell eqkghgqvln yneiihtvfi rgvedlkytk
      781 qfylepella vllgtmihtg aievtienkt ysavnmrdyv qlplnklmqf shikkpsglp
      841 iealnavadl ygetianydd amlkrvinti aekankdihd tlttiqlvrk gfptwdgpll
      901 tnsdiqenvq lleqykefce glkrydtqak mnnlkydvam ieaqklaksk lsnfmeleqq
      961 ikevtqhvsy lqlamtnmgr hsdwsqrveq aldellyelk qqtninlsev dklkqeyiql
     1021 yiqkhdqsrl nasenflkts llndektkal kllaahvsil pkeeffkweh tlanlktcya
     1081 vtadklqhsp tcseckfqpi eittnekaql kqleeqlpkl leewketllt nfndpeiken
     1141 itllsneqqq lvqsliqnre ftlpidirli qaindllkgi nklelslsdl eemmanghpl
     1201 tveelrkrfe alitktvgna stnqvrimlk k
//
LOCUS       WP_257961970              98 aa            linear   BCT 02-MAR-2025
DEFINITION  Fic family protein [Lysinibacillus capsici].
ACCESSION   WP_257961970
VERSION     WP_257961970.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 98)
  AUTHORS   Garcia-Pino,A., Christensen-Dalsgaard,M., Wyns,L., Yarmolinsky,M.,
            Magnuson,R.D., Gerdes,K. and Loris,R.
  TITLE     Doc of prophage P1 is inhibited by its antitoxin partner Phd
            through fold complementation
  JOURNAL   J Biol Chem 283 (45), 30821-30827 (2008)
   PUBMED   18757857
REFERENCE   2  (residues 1 to 98)
  AUTHORS   Lehnherr,H., Maguin,E., Jafri,S. and Yarmolinsky,M.B.
  TITLE     Plasmid addiction genes of bacteriophage P1: doc, which causes cell
            death on curing of prophage, and phd, which prevents host death
            when prophage is retained
  JOURNAL   J Mol Biol 233 (3), 414-428 (1993)
   PUBMED   8411153
REFERENCE   3  (residues 1 to 98)
  AUTHORS   Komano,T., Utsumi,R. and Kawamukai,M.
  TITLE     Functional analysis of the fic gene involved in regulation of cell
            division
  JOURNAL   Res Microbiol 142 (2-3), 269-277 (1991)
   PUBMED   1656497
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014691.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02661.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..98
                     /product="Fic family protein"
                     /calculated_mol_wt=11312
     Region          <3..94
                     /region_name="FIDO"
                     /note="Fido, protein-threonine AMPylation domain [Signal
                     transduction mechanisms]; COG2184"
                     /db_xref="CDD:441787"
ORIGIN      
        1 mgneilsklq kegtwgtlee atkklayyka efnllhpfre gngrtirlfi ylyalskdfl
       61 weymdlgsee ymeamiaskt detmlegifk ktlkgldk
//
LOCUS       WP_257961974            1553 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA domain-containing protein [Lysinibacillus capsici].
ACCESSION   WP_257961974
VERSION     WP_257961974.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024486.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13086.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1553
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..1553
                     /product="AAA domain-containing protein"
                     /GO_function="GO:0004386 - helicase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=179371
     Region          367..>425
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Region          370..>556
                     /region_name="AAA_11"
                     /note="AAA domain; pfam13086"
                     /db_xref="CDD:404072"
     Site            389..395
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          <798..1332
                     /region_name="DNA2"
                     /note="Superfamily I DNA and/or RNA helicase [Replication,
                     recombination and repair]; COG1112"
                     /db_xref="CDD:440729"
     Region          1351..1444
                     /region_name="MTES_1575"
                     /note="REase_MTES_1575; pfam18741"
                     /db_xref="CDD:465853"
ORIGIN      
        1 mdtltinnka snliqyindl sklkqrpias yksyeeiiwi ekdiptepet tdffrsdtsn
       61 wltvkkpvkp kdpilpnelk dwllinfhkl tyeeidvkse qivnddnetv iidvsidefp
      121 hikgerkafi envwepyvke mkrvkkvqdl ydrlftihqm lqtnseslel ivaigllqwn
      181 lpkqaverhv linkvelhfd kekavfkied sanglaveye edmlslenql qkvdhnevqq
      241 likgineeqs vmsqleailk tvanaldscs qyneslaips ikdsasllis nspafivrkk
      301 tqksfqnace vavqqlsdds vevptnlanm fnyeqgekst iheyeatehd evtlpksnpf
      361 yfplpsneeq eriikslsnk dnvlvqgppg tgkthtianl tahllstgnr vlitsqtaka
      421 lsvlksklpt dlqaltvsyl ggdsssikdl ekvvgtisvn kerfdlkekk liveqkeqql
      481 kelkgklnkt ktelleireq etykhdfskp yvgtaqqiir qvhaldeqyk wytsdvtlkt
      541 redywqlekk liddiillna tfedipseyk tfdypnlpie teiqsfeslf teevrlienl
      601 kllesakken lielvqslth eqqsnmlnef erynslkqpl lfkiypalqk iladvfmnrg
      661 mnwkeyseql ahalstyvqy eneveetlfd vkeislatlk vmstdltthl dqggnlgnfl
      721 mkpkvvkqyk dqlsvitynr qllktpeqiy llnkyvllet akqklkellv plfieehlmk
      781 pvtfkqevqs imeqlkmiea ihewrenvln kfdvlspnef detlieqltn niqivqlekq
      841 lvqlqtslkd itkpieevit dsvhglykql leamqarnsn lvrsmwesyi lyqevkkrde
      901 tvvelknklf ahsplvgasf ietmedsiwq krliewekaf mhkqvknwle afllrdehvl
      961 sqkydeievq ikqtiieigs tkawinmlqs mtdlqsqhlk awmksvknvg kgtgknatry
     1021 rmeaqmhmek cmgaipawim pmnqvfdnfe ikpnlfdvvi ideasqswhe alllkyvakk
     1081 miivgddkqi sptiigided dvkklqtryf kdigfdfgfd lniknsffdi cyimfkdtit
     1141 lrehfrcmpe iigfsnlisy senpliplrq ypanrlepik trylpegvre gtgqyaynea
     1201 eadaiveeiv kcienpqyeg ktfgvisllg igqakliqnk llqtigaeim eerhiicgda
     1261 ysfqgderdv iflslvaakg ekritaltne garqrfnvaa srakdqlwlm hsittndisn
     1321 keclryqlls yianplqeen esnrllcese feksvsdait vrgykvipqy qvngyridlv
     1381 vvgektriav ecdgdhwhts pedverdfqr ekilqragwk fwrilgskyy hnpekalesl
     1441 watldemgiy pfaasveptt dvvvnteiaa ttiehdtvsg ptelyhdvrk mlrtegfevl
     1501 qdrpltnkly vvgskllqre ldyvlpkgve ftfysdgldi tegmpvwviv inn
//
LOCUS       WP_257961975             746 aa            linear   BCT 02-MAR-2025
DEFINITION  dynamin family protein [Lysinibacillus capsici].
ACCESSION   WP_257961975
VERSION     WP_257961975.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 746)
  AUTHORS   Warnock,D.E. and Schmid,S.L.
  TITLE     Dynamin GTPase, a force-generating molecular switch
  JOURNAL   Bioessays 18 (11), 885-893 (1996)
   PUBMED   8939066
REFERENCE   2  (residues 1 to 746)
  AUTHORS   Obar,R.A., Collins,C.A., Hammarback,J.A., Shpetner,H.S. and
            Vallee,R.B.
  TITLE     Molecular cloning of the microtubule-associated mechanochemical
            enzyme dynamin reveals homology with a new family of GTP-binding
            proteins
  JOURNAL   Nature 347 (6290), 256-261 (1990)
   PUBMED   2144893
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012570.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00350.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..746
                     /product="dynamin family protein"
                     /calculated_mol_wt=84698
     Region          81..178
                     /region_name="YlqF_related_GTPase"
                     /note="Circularly permuted YlqF-related GTPases; cl49605"
                     /db_xref="CDD:483945"
     Site            order(113,116..118)
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206746"
     Region          138..308
                     /region_name="Dynamin_N"
                     /note="Dynamin family; pfam00350"
                     /db_xref="CDD:459775"
     Site            142..149
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206746"
     Site            order(167..170,176..178)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206746"
     Site            170
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206746"
ORIGIN      
        1 mlidikkyre etlkmsveev aehleydved ivymeelgvy snefiqefcg yfgvnpldlk
       61 kdksikkkev knpelndwqe ikdyrdalle qlqsyikevs klkrqessef linqykanie
      121 slkkvhntit ltfrkptiai vgmsdagkst linhllnadk mptswtpttt isviikhind
      181 rptflqeelv ilggqksffk venlhnetyv kkfiliegds sllheygtrq gnkmdeatha
      241 ilyldsellk vcdfvdlpgf gtgeskddkl aqqsykfadi viylsvangf lrgndiefik
      301 tslqslqple nptnnlaslr nfyilasqsh tvnrgnradl qmildkgaer lyneippevw
      361 eqkeqltnrf veetdirnrf ftfttdskll rrdfeedlyn llkeipklvl ekgqkmiana
      421 vylerenllk qlnaihetmt kyeetmgkyi ktkteegarv qkvllsrerl fkalkekela
      481 siqqfkgeyq svlseiniie iidknnykkk kadlerlvsy istqlqtklq dtlsyyakkf
      541 qadinqflee ydkaipinsd teisnivipf ntkavfagav aglgtfgals iwaasmgnlg
      601 ayilvakgvs llsavgisvg gtaaatagva aiggpvvlgi aiaailgvgv wklfsggwkk
      661 divkninkqf dkqgvkdkll eevysfwktt enevknaiee lessyhktle eleanldatn
      721 snelpekkei iqmninvydq llvkid
//
LOCUS       WP_257962028             272 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_257962028
VERSION     WP_257962028.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 272)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>272
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          110..>272
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mtandllall nskgialsvk gdnlaitgde kvledpglla llrankpali dlikdghgtv
       61 ggavrvppnr ipadaeriap eqltlvrldq geidalvarv dggaanvqdi yplvpmqegm
      121 lfhhllsqqg daylesylla frtrerldrf lsalqqvidr hdilrtaffw eglphsvqvv
      181 qrratlplnv veldprdgdv gqqlearydp rshridvgra plmqvhaahd aaggrwlvrl
      241 lshhlavdht tlervieear aieqgrvedl pr
//
LOCUS       WP_257962058             318 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: AAA family ATPase [Lysinibacillus].
ACCESSION   WP_257962058
VERSION     WP_257962058.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus
  ORGANISM  Lysinibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025052.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13671.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Lysinibacillus"
                     /db_xref="taxon:400634"
     Protein         1..318
                     /product="AAA family ATPase"
                     /calculated_mol_wt=37045
     Region          1..143
                     /region_name="COG4639"
                     /note="Predicted kinase [General function prediction
                     only]"
                     /db_xref="CDD:443677"
     Region          <218..313
                     /region_name="PcnB"
                     /note="tRNA nucleotidyltransferase/poly(A) polymerase
                     [Translation, ribosomal structure and biogenesis];
                     COG0617"
                     /db_xref="CDD:440382"
ORIGIN      
        1 mkviftvglp gsgkstfvkq laknenaivl ssdairqelf gdstkqksri vfrtlyerln
       61 dlvakgfsvi vdatnierer rmfalrkips nvqkvcyyfd tpysicvarn qqrkrhvpli
      121 vmekmrkhle fptvgegfne lhiihesspy dlsrqqfvsl iqghptyeel fqtlqavplf
      181 keiyqfdqen pfhqfllcqh tyfvyayine yylesdklal qiaalfhdvg kpackkykpl
      241 qqrygyfghe nvsaqlvchf llelgfekef vlkvvhlvqf hmliqyggdr ggsqiyhlld
      301 gdlltrlyff readqfak
//
LOCUS       WP_257962145             314 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Lysinibacillus capsici].
ACCESSION   WP_257962145
VERSION     WP_257962145.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 314)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 314)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 314)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..314
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=34869
     Region          51..296
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(129..130,133,157)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238558"
ORIGIN      
        1 mltqnikfia plfllillll tacgekekns spttvqdtke agaktvqttn gevviptspq
       61 rivaeeyias llvldvkpvg apglalenyy lkdalkdvee igdygkpsie kiialkpdli
      121 itgngenyda lskiaptvvi pygelkdahe eltyfgellg keqeakdwlt qydqkiadak
      181 aqvdaiipkd asfsiiedad ktyyaygdnf grggqpvyqa lgrkppakva demmekqwae
      241 iseevladya gdyiiltsdd rtvedfkkdp iwgslpavkn dhlyvwpeer swyydptavl
      301 aqveeltnwl tnkk
//
LOCUS       WP_257962147             318 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Lysinibacillus capsici].
ACCESSION   WP_257962147
VERSION     WP_257962147.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 318)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 318)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 318)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..318
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=34914
     Region          51..301
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(134..135,138,161)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238558"
ORIGIN      
        1 mkkfikknaf ltgiliisil ltacgtqsss tiekakeens nrvltdsiah evtipknpqr
       61 iiapyledhl valglkpvaq wsvkggtsiq dylqdslkdi piiefdlpye avtsfnpdli
      121 vigspeiaeg ekykqyskia ptyvmgtedn nwrnkllkmg eifgqtdkak evladydqfa
      181 keakeeihnk vgkpsatviw ninnsiymvs dtassgvvly edlglqtpsl vkemsasaag
      241 dwsqvslekf vqidadylfv insdsagsse llsdpllani paikdghvye fdsssswlys
      301 gaianrqiiq nvldsivk
//
LOCUS       WP_257962150             544 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Lysinibacillus
            capsici].
ACCESSION   WP_257962150
VERSION     WP_257962150.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..544
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=62751
     Region          25..268
                     /region_name="AraC"
                     /note="AraC-type DNA-binding domain and AraC-containing
                     proteins [Transcription]; COG2207"
                     /db_xref="CDD:441809"
     Region          179..261
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
     Region          278..523
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(356..357,360,382)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238558"
ORIGIN      
        1 mednksasin ndllfhledi dcisqsfpfi stshhtmilf tngcgtltid dipylvtkgk
       61 iflvqphsmi dlsdinhgyr fykiafsafq lkhkhpsphl gsifsdevey tiypytrlir
      121 lsddlynlnp kldflkqqgv lyellnllfe hqlhmnyqlt mtkaveetid yihnyfqqpl
      181 tvkklaelar iaqwqystif qtltgkkpld yitdlrltna kelllqtnep lkdiaqqvgf
      241 ddeyyfnrrf rqvigippkq farqykqktv vkdwtgheva iprsphrviy hgetfgdmli
      301 fdvqpiggnk nsisksfykn hvpyiqdvaf pinleksskl npdliiftnn deqqyqalss
      361 iaptvtlnsw dsleervlll gqwlsqqqra edwleyfkiq entmwqqlqt viepgetasv
      421 ltfdhgkrlf imgctglspa lfhpdgfqph pqvkkllqag egyreipidh lpqyagdrif
      481 mllsdktesq matmelinsd mwkglpavqt nhaylvdatk wnygdaftre kllgalpkll
      541 vtak
//
LOCUS       WP_257962151             332 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Lysinibacillus capsici].
ACCESSION   WP_257962151
VERSION     WP_257962151.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 332)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 332)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 332)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..332
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=36745
     Region          68..315
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(153..154,157,180)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238558"
ORIGIN      
        1 mkqncpiqch tiiksaylsa mflltigils acntqssnkv eqvetqasse stkeqsiypl
       61 tlkdevgnev tlpakptkif apvmedslla lgikptmqws ngvkpqlylq dqlqgipeis
      121 fasgppsaea imadkpdlii lhnsfymeng tyekyakiap tyvfnnaasd legsikvlgq
      181 lldetdkaeq aiqdyqekvd vaktklssit egkkialirf nakgmffmtd eyfsgyvlth
      241 elgfeqssyv kngafevsle ilpeldadyi flindgnlgd eflnelknsk iwqstvafkn
      301 nqvfetsady wlnggihaqg kviedvlefl ap
//
LOCUS       WP_257962162            1329 aa            linear   BCT 02-MAR-2025
DEFINITION  InlB B-repeat-containing protein [Lysinibacillus capsici].
ACCESSION   WP_257962162
VERSION     WP_257962162.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 1329)
  AUTHORS   Bleymuller,W.M., Lammermann,N., Ebbes,M., Maynard,D., Geerds,C. and
            Niemann,H.H.
  TITLE     MET-activating Residues in the B-repeat of the Listeria
            monocytogenes Invasion Protein InlB
  JOURNAL   J Biol Chem 291 (49), 25567-25577 (2016)
   PUBMED   27789707
REFERENCE   2  (residues 1 to 1329)
  AUTHORS   Ebbes,M., Bleymuller,W.M., Cernescu,M., Nolker,R., Brutschy,B. and
            Niemann,H.H.
  TITLE     Fold and function of the InlB B-repeat
  JOURNAL   J Biol Chem 286 (17), 15496-15506 (2011)
   PUBMED   21345802
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021028.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09479.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1329
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..1329
                     /product="InlB B-repeat-containing protein"
                     /calculated_mol_wt=144656
     Region          207..293
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; smart00060"
                     /db_xref="CDD:214495"
     Region          309..373
                     /region_name="Flg_new"
                     /note="Listeria-Bacteroides repeat domain (List_Bact_rpt);
                     pfam09479"
                     /db_xref="CDD:462813"
     Region          379..443
                     /region_name="Flg_new"
                     /note="Listeria-Bacteroides repeat domain (List_Bact_rpt);
                     pfam09479"
                     /db_xref="CDD:462813"
     Region          449..513
                     /region_name="Flg_new"
                     /note="Listeria-Bacteroides repeat domain (List_Bact_rpt);
                     pfam09479"
                     /db_xref="CDD:462813"
     Region          519..583
                     /region_name="Flg_new"
                     /note="Listeria-Bacteroides repeat domain (List_Bact_rpt);
                     pfam09479"
                     /db_xref="CDD:462813"
     Region          589..653
                     /region_name="Flg_new"
                     /note="Listeria-Bacteroides repeat domain (List_Bact_rpt);
                     pfam09479"
                     /db_xref="CDD:462813"
     Region          659..723
                     /region_name="Flg_new"
                     /note="Listeria-Bacteroides repeat domain (List_Bact_rpt);
                     pfam09479"
                     /db_xref="CDD:462813"
     Region          729..793
                     /region_name="Flg_new"
                     /note="Listeria-Bacteroides repeat domain (List_Bact_rpt);
                     pfam09479"
                     /db_xref="CDD:462813"
     Region          801..866
                     /region_name="Flg_new"
                     /note="Listeria-Bacteroides repeat domain (List_Bact_rpt);
                     pfam09479"
                     /db_xref="CDD:462813"
     Region          1120..1158
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          1178..1218
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          1248..1289
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
ORIGIN      
        1 mkifsrlkig ilcicmivln lssmtivevp rvsattfpss edfessdgvg tnpriigdwe
       61 fallkidgtl ddsnnsnndi ddfyptdksl gmsgypgivt tasiksikgn fklnslrles
      121 avneivelki egyrdntfvt gavvinqymp fekidvpltg epwqnideir isrtdgvadi
      181 fvriyhldvs asvtstedli ppeisnpsin vmnisnnsvt lnwlkatdni tstedleyqi
      241 yqstsnnidt vshietngia lgnyskdiat fdipdllqnt tyyfniivkd aagnktaytm
      301 vnvttlkays vsfsvdggst vpaqtiahge katepppptk agytfvgwyt ssmgntpfnf
      361 dtaitgatti yakwnpvtht vsfdvdggst ipaqtiahge kateppsptk vghtfvgwyt
      421 sstgntpfnf dtaitgativ yakwnpltyt vsfdvdggnt ipaqtiahge kateppsptk
      481 aghtfvgwyt ssmgntpfnf dttitgaiti yakwspvtht vsfdvdggst isaqtiahge
      541 kateppppmk aghtfvgwyt sssgntafnf dtaitgatmi yakwnpvtht vsfdvdggst
      601 ipaqtiahge katepppptk vghtfvgwyt sstgntpfnf dtvitgdtti yakwnpvtht
      661 vsfdvdggst isaqtiahge kateppsptk aghtfvgwyt sssgntafnf dtaitgdtmi
      721 yakwnpvtht vsfdvdggst ipaqtiahge katepppptk aghtfvgwyt ssmgntafnf
      781 dttitgdtmi yakwnpvtvt htvsfdvagg savsnqmvvh egkasqptka ptkagytfgg
      841 wytsnayttp ynfntaitan tviyakwinn ntggdntdps pnpdsgsstp stnveeivvd
      901 vesgngdvvs kttikrsknv dntmnddvtl taasatetir klkeqgndka riiipdekdq
      961 vnqvqvsipk nvlsllqnga vhleivtdnv rievpktsle mfnenlyfrl vpikeydkql
     1021 eieeqakret vvqqlvegrv vkllgrpmti etnmqsrpvk ltlplptdlt deqlanlaif
     1081 iehsdgtkev vrgkvveyqk giglqfevnk fstfsilylp ekeevkepit egvthlpyiq
     1141 gypddtfrpn apvtraqmas mfarqltgna ipqakatytd tfqhdakdai efakekglfk
     1201 gvtatnfnpn gfitraqmat vaarwieqqc verpdadfcs ptsqsavfkd vsvhhwarqa
     1261 idtvnaaeim tgitadtfnp dglltraqav kvlnrlferq vliedqtplf kdvpkhhwaf
     1321 yeiqeaakk
//
LOCUS       WP_257962272            1011 aa            linear   BCT 02-MAR-2025
DEFINITION  leucine-rich repeat protein [Lysinibacillus capsici].
ACCESSION   WP_257962272
VERSION     WP_257962272.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024702.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13306.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..1011
                     /product="leucine-rich repeat protein"
                     /calculated_mol_wt=111001
     Region          <66..100
                     /region_name="LRR_5"
                     /note="BspA type Leucine rich repeat region (6 copies);
                     pfam13306"
                     /db_xref="CDD:463839"
     Region          89..210
                     /region_name="LRR_5"
                     /note="BspA type Leucine rich repeat region (6 copies);
                     pfam13306"
                     /db_xref="CDD:463839"
     Region          91..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          113..133
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          134..156
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          157..178
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          179..200
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          201..223
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          304..425
                     /region_name="LRR_5"
                     /note="BspA type Leucine rich repeat region (6 copies);
                     pfam13306"
                     /db_xref="CDD:463839"
     Region          306..327
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          328..348
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          349..371
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          370..487
                     /region_name="LRR_5"
                     /note="BspA type Leucine rich repeat region (6 copies);
                     pfam13306"
                     /db_xref="CDD:463839"
     Region          372..393
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          394..415
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          416..437
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          438..459
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          460..481
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          482..503
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          564..639
                     /region_name="Flg_new"
                     /note="Listeria-Bacteroides repeat domain (List_Bact_rpt);
                     pfam09479"
                     /db_xref="CDD:462813"
     Region          645..710
                     /region_name="Flg_new"
                     /note="Listeria-Bacteroides repeat domain (List_Bact_rpt);
                     pfam09479"
                     /db_xref="CDD:462813"
     Region          718..783
                     /region_name="Flg_new"
                     /note="Listeria-Bacteroides repeat domain (List_Bact_rpt);
                     pfam09479"
                     /db_xref="CDD:462813"
     Region          <797..>839
                     /region_name="PspC_subgroup_1"
                     /note="pneumococcal surface protein PspC, choline-binding
                     form; NF033838"
                     /db_xref="CDD:468201"
     Region          843..884
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          903..943
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          961..1001
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
ORIGIN      
        1 mkaksvrygi wftlfifmml vkipftfane adydvedspd gsitiktytg tggdmviphq
       61 iqgkivtgid awvftnknlt sltipetitt igayafyqnq ltsvtlpsnl tnisdgvfsl
      121 nqltnvilpn nlssignyaf sgnllesvdi pksvisigdh afstndivnv kipegvkiig
      181 snafarndie sleipesvks igdeafsnny lkeiiiyskd veigddafig hspnlviyap
      241 enssakeyad rlninfqgin spdpvneady ewtknrdgsv tirdyigtdm aitipsqldg
      301 rvvtaigsga fgekgltqvi ipdsvtsigd vafaenqlty vklpnnlkki gegvfftnkl
      361 taieipdqvt qigsyafldn alatvklpnq lktigdfafm enqltnielp atletigewa
      421 fsdnhitslv iptsvvsiga yafatnelsn vtipssitsi aesvfldnql tsieipssvt
      481 nigrwafgkn rlssieipkn vmtvednafn dnnlkqvkil sdatilledi fnanpsnlii
      541 yghdastaqa yanqnnhqfe lltyqiiyhg ngseqgnppv dmnmyprntp atildnigsl
      601 ektgytfdgw nstnvgdgid ytvnsivdie esdlalyakw kansyvvtfn tnggtainpi
      661 tviyealvsk pvipikpgyt flgwykdaqf ttpwnfttdm itqnttlyak wenvvaqytv
      721 dfetnggsav asqkvtkdtl atnpvnptka gytftgwykd ieltipwnfs kdvvksnitl
      781 yahwvkdgss ggggsispnp spkpgpnipe kqeqkpeepk seeqkpkpee pidpqptepd
      841 iifsdisqgh wawamiqema kqgiitgyqd gtfkpnapiq rqhaaliltr alalepkkda
      901 refndipkdh lyfgvidqvq qaglfegidg nfqpttnltr aqmakvlvla fnltssnkdt
      961 fedvpkthwa hnfiailagn gitigdngnf rpndpvtrae fvtflyralh q
//
LOCUS       WP_257962339             168 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein, partial [Lysinibacillus
            capsici].
ACCESSION   WP_257962339
VERSION     WP_257962339.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 168)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         <1..>168
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
     Region          <1..>168
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     Site            order(14..18,26,41,43..44,92..95,98,101..102,122..124,156)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143442"
     Site            order(18,122,153,156)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143442"
ORIGIN      
        1 nrydyiplgi givispwnfp faimagttva alvtgntvll kpasttpvia ykfievleea
       61 glpagavnfv pgsgaevgdy lvdhpktrfi sftgsrdvgl rinqrasvln egqiwikrvi
      121 aemggkdtiv vdkeadlela aqsivksafg fsgqkcsacs ravivedv
//
LOCUS       WP_257962340             101 aa            linear   BCT 02-MAR-2025
DEFINITION  nitroreductase family protein, partial [Lysinibacillus capsici].
ACCESSION   WP_257962340
VERSION     WP_257962340.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus capsici
  ORGANISM  Lysinibacillus capsici
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 101)
  AUTHORS   de Oliveira,I.M., Henriques,J.A. and Bonatto,D.
  TITLE     In silico identification of a new group of specific bacterial and
            fungal nitroreductases-like proteins
  JOURNAL   Biochem Biophys Res Commun 355 (4), 919-925 (2007)
   PUBMED   17331467
REFERENCE   2  (residues 1 to 101)
  AUTHORS   Hecht,H.J., Erdmann,H., Park,H.J., Sprinzl,M. and Schmid,R.D.
  TITLE     Crystal structure of NADH oxidase from Thermus thermophilus
  JOURNAL   Nat Struct Biol 2 (12), 1109-1114 (1995)
   PUBMED   8846223
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013077.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00881.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Lysinibacillus capsici"
                     /db_xref="taxon:2115968"
     Protein         1..>101
                     /product="nitroreductase family protein"
     Region          4..>94
                     /region_name="Nitro_FMN_reductase"
                     /note="nitroreductase family protein; cl00514"
                     /db_xref="CDD:444950"
ORIGIN      
        1 mnntietiln hrsirsftdq lltaeeidil vksaqaasts syvqaysiig vsdpekkrel
       61 svlagnqpyv ennghffvfc adlhrhqkla eekgenisel l
//
LOCUS       WP_257962409             514 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Streptococcus
            parasanguinis].
ACCESSION   WP_257962409
VERSION     WP_257962409.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus parasanguinis
  ORGANISM  Streptococcus parasanguinis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Streptococcus parasanguinis"
                     /db_xref="taxon:1318"
     Protein         1..514
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=60007
     Region          3..123
                     /region_name="REC_YesN-like"
                     /note="phosphoacceptor receiver (REC) domain of YesN and
                     related helix-turn-helix containing response regulators;
                     cd17536"
                     /db_xref="CDD:381091"
     Site            order(8..11,14..16,19,105..106)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381091"
     Region          255..513
                     /region_name="AraC"
                     /note="AraC-type DNA-binding domain and AraC-containing
                     proteins [Transcription]; COG2207"
                     /db_xref="CDD:441809"
     Region          <396..509
                     /region_name="GlxA"
                     /note="Transcriptional regulator GlxA, contains an amidase
                     domain and an AraC-type DNA-binding HTH domain
                     [Transcription]; COG4977"
                     /db_xref="CDD:444002"
ORIGIN      
        1 mnillvdddr fiikalqeti hwealgieqv ytasslsqaq aiiqshpval misdiempqg
       61 sgldllawvr sekydiqtif ltnyadfnya qkaielqsfe yylkpidpdr lefiiqkaln
      121 kikrhksaaq laqqgqkeae fwhdylrkpr psqselllqe vtkrgyspkp hedyllvlit
      181 lhlveedfhp svpswrlqlr hcikdlsldf pvhycalski enqtdrylcl fkknqtteca
      241 dflkaiqqki qqdldrssil lysdsislet llmkalhlcq yseeqvfhwn sihsyaslap
      301 lpqkpthrts ltftnqlete qllqiihsle tqdriplsal selqldwtqq igiyldkngi
      361 lahklfqnkh hqflferhfh aieafeayig dywssarhyv idlehqsnli qritdyidhh
      421 ykedisrtkl aemvflspdh larmfkrdtg etlmkyitdk rmaaakemls qsntpiyqva
      481 lqvgydnysy ftkafkqkvg lspgdyrkqc qeaf
//
LOCUS       WP_257962492            1241 aa            linear   BCT 02-MAR-2025
DEFINITION  mucin-binding protein [Streptococcus parasanguinis].
ACCESSION   WP_257962492
VERSION     WP_257962492.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus parasanguinis
  ORGANISM  Streptococcus parasanguinis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 1241)
  AUTHORS   MacKenzie,D.A., Tailford,L.E., Hemmings,A.M. and Juge,N.
  TITLE     Crystal structure of a mucus-binding protein repeat reveals an
            unexpected functional immunoglobulin binding activity
  JOURNAL   J Biol Chem 284 (47), 32444-32453 (2009)
   PUBMED   19758995
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17966.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1241
                     /organism="Streptococcus parasanguinis"
                     /db_xref="taxon:1318"
     Protein         1..1241
                     /product="mucin-binding protein"
                     /note="The YSIRK form of extended signal peptide directs
                     nascent proteins to the cross-wall site, while signal
                     peptides lacking YSIRK direct proteins instead to the cell
                     pole. A large fraction of YSIRK proteins are surface
                     proteins anchored by sortase-mediated processing of a
                     C-terminal LPXTG motif.; The YSIRK form of extended signal
                     peptide directs nascent proteins to the cross-wall site,
                     while signal peptides lacking YSIRK direct proteins
                     instead to the cell pole. A large fraction of YSIRK
                     proteins are surface proteins anchored by sortase-mediated
                     processing of a C-terminal LPXTG motif."
                     /calculated_mol_wt=132397
     Region          1..41
                     /region_name="YSIRK_signal"
                     /note="Gram-positive signal peptide, YSIRK family;
                     TIGR01168"
                     /db_xref="CDD:273479"
     Region          117..>476
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          134..255
                     /region_name="Pectate_lyase_5"
                     /note="Putative pectate lyase-like adhesive domain;
                     pfam20585"
                     /db_xref="CDD:466734"
     Region          938..1011
                     /region_name="MucBP_2"
                     /note="Mucin binding domain; pfam17965"
                     /db_xref="CDD:465592"
     Region          <1012..1241
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1114..>1202
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
ORIGIN      
        1 mkdifnrrqr fslrkysigv csvllgtalf aagsqtvlad evenpadsss dvisseatsd
       61 keialskpvt gessaptsyn vaavvqpsva tdsqhegdke agkeataept etvsreatgt
      121 sgfrnsgevt srvvsnwngf vsalndnsiq nitisgnvva tgdngntdng rvnsvdrtva
      181 insqgrnvvi qgrndqasld llsnslrftg ssawnlvfkn lqlatgnskg avdlssttga
      241 ntvtfenvks qgsslygggg ntdvivkget sstvsdsyrs angqtqyvqr nvgsaghsvl
      301 rreanihdak svtvadgasl tlnrssqgdg inlaggstvr vndgasltin mntdngtesa
      361 ryhnagifme hggtvvtgkd skltlntsig qaislgmgrp adglthldrw ggygtgnafr
      421 rngkssltig ehasfnftgr dglvfgnnaa fttgensrvr fenkgrgtai dfgdnsrvvf
      481 gkkstntfhs vgkgpksggg psgsynayny iglnengsil vddyatfrvq mdnrganpwd
      541 dvinldskhg rkdqplfqan kgsivdvrdd ntdyyaelis vplgastnvv fqfnnplyvs
      601 fmrytnsegr sageitgklp fgiaqgnnpe qighgnilyi sngsresgnh iefngptgtr
      661 vnrgagtytv yslnrdgrdv vsknrmssvw tdiqggamsi agfkpggkpe inpssstsvq
      721 tgsssggvla tdktygidpv tanrqniwvs ngtsinphat htntiryvye dgspvldang
      781 kpkvvvqtsd wkrllevaid qdqfkkvlks ssvangdefl aaygkteyiv rdidgdgigd
      841 tgwqlagttn skatydtvvs pevegykaei lstnvpglav gtkasrvtvt fnpanikddv
      901 vvtqggrrtv setywrnivd nvqltnyetv vvykqdkqka svkyvnvtsn ielakdemeg
      961 rggalieyst adrisaykka gyrlledgft naadkhydtn vsvdqefvvt leeriepvtp
     1021 qdpkpvpgip vtpedpaswp kevkdmkele rtatqtirfr eeesgkevfk tiirkvtfer
     1081 tayvnlvtgh idysnwrigk vvneegpvqp vvnsssevsr phavapkpsv rslkanahsv
     1141 apssaptask levsevvatp apekasvspk vvspapttvv kptetkavds paplvpsesp
     1201 avekrtvvgp srkapvtank hvyvakpvlt rgrssrrppk v
//
LOCUS       WP_257962507             370 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma 54-interacting transcriptional regulator [Bacillus sp.
            UMB0893].
ACCESSION   WP_257962507
VERSION     WP_257962507.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. UMB0893
  ORGANISM  Bacillus sp. UMB0893
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 370)
  AUTHORS   Studholme,D.J. and Dixon,R.
  TITLE     Domain architectures of sigma54-dependent transcriptional
            activators
  JOURNAL   J Bacteriol 185 (6), 1757-1767 (2003)
   PUBMED   12618438
REFERENCE   2  (residues 1 to 370)
  AUTHORS   Chaney,M., Grande,R., Wigneshweraraj,S.R., Cannon,W., Casaz,P.,
            Gallegos,M.T., Schumacher,J., Jones,S., Elderkin,S., Dago,A.E.,
            Morett,E. and Buck,M.
  TITLE     Binding of transcriptional activators to sigma 54 in the presence
            of the transition state analog ADP-aluminum fluoride: insights into
            activator mechanochemical action
  JOURNAL   Genes Dev 15 (17), 2282-2294 (2001)
   PUBMED   11544185
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00158.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Bacillus sp. UMB0893"
                     /db_xref="taxon:2066053"
     Protein         1..370
                     /product="sigma 54-interacting transcriptional regulator"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008134 - transcription factor binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=41930
     Region          <4..290
                     /region_name="RocR"
                     /note="RocR-type transcriptional regulator, contains PAS,
                     AAA-type ATPase, and DNA-binding Fis domains
                     [Transcription, Signal transduction mechanisms]; COG3829"
                     /db_xref="CDD:443041"
ORIGIN      
        1 mkdidnqlta aytfdeiige hslmiekkfi akklaradlp iiiegptgsg kqmfgnaihn
       61 esnrkllpfv svncstfsde qlqyelfgse hdekaglfek aeggtiflnd issislqlqa
      121 qllrvlqerq vqrigsahfk ladvriiass aaalqplvae gsmredlyyh lnvlritlps
      181 lidrssdipl laasflkkrq qalridkkvm dilmkyhwpg nvlelknifd ylmtvcdgrs
      241 iqlhdlpkep fltkepnkqk ketknqkdkp ltlmdkqeyl filesirasn eegepasrri
      301 isdssknsrh pltpqqvrhr ldflekndyi tkgrgragtk itlegldflq sltenlqtiq
      361 keanqnaild
//
LOCUS       WP_257962659             237 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6318 family protein [Rothia dentocariosa].
ACCESSION   WP_257962659
VERSION     WP_257962659.1
KEYWORDS    RefSeq.
SOURCE      Rothia dentocariosa
  ORGANISM  Rothia dentocariosa
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Rothia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040060.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19843.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Rothia dentocariosa"
                     /db_xref="taxon:2047"
     Protein         1..237
                     /product="DUF6318 family protein"
                     /calculated_mol_wt=25613
     Region          68..222
                     /region_name="DUF6318"
                     /note="Family of unknown function (DUF6318); pfam19843"
                     /db_xref="CDD:437675"
ORIGIN      
        1 mvtslpysrr rvlrtvgagl fgtaastlia acsrhqqtha tsdpsvsqyv rsdfsgevaf
       61 esfntstgty vpanaehpaq nvpvpikten mgknsiagfy dtigylnaal nyllatgdtn
      121 plevitinpe ftkalllftd etgesqaaks wyvspqatls ltsrmptavn dyrkdwrytl
      181 dislgeqqvv nsqtsaipae qqkfhyagti qgtfekeaws ltltvrdpqs tagasps
//
LOCUS       WP_257962589             333 aa            linear   BCT 02-MAR-2025
DEFINITION  GHKL domain-containing protein [Streptococcus salivarius].
ACCESSION   WP_257962589
VERSION     WP_257962589.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus salivarius
  ORGANISM  Streptococcus salivarius
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025854.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14501.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Streptococcus salivarius"
                     /db_xref="taxon:1304"
     Protein         1..333
                     /product="GHKL domain-containing protein"
                     /calculated_mol_wt=38720
     Region          198..332
                     /region_name="HATPase"
                     /note="Histidine kinase-like ATPase domain; cl00075"
                     /db_xref="CDD:469604"
     Site            order(240,244,247,274,276,278,280,299..302,319,321,
                     325..326,328)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340391"
     Site            order(289,302)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340391"
ORIGIN      
        1 mgsnalfyll syglilplyf vfdrflgldl krwkvysdds fqnlqisrrv aiamaiyllg
       61 iylsvnldsw fpgyssevel rlrmlwvlls avafifliah lnqlsrqyle eslameekrh
      121 lnsltkanqk idllynellq yrqsyqtvve qfseevrdqe ealaeqvyqn vlresakefe
      181 rfrvidnpkl eniqslplrs llsarmmeak rsnipvtcdi peeisgftmn vvdltllvsi
      241 ffsnaidesk qvpvsqinfs fhrhnedgsy hfvmenrtqe ekvdldaimq eenqkktsgl
      301 nlhsakdilr kysdanlits sgdylfkqel ifk
//
LOCUS       WP_257962674              58 aa            linear   BCT 02-MAR-2025
DEFINITION  Type 1 glutamine amidotransferase-like domain-containing protein
            [Rothia dentocariosa].
ACCESSION   WP_257962674
VERSION     WP_257962674.1
KEYWORDS    RefSeq.
SOURCE      Rothia dentocariosa
  ORGANISM  Rothia dentocariosa
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Rothia.
REFERENCE   1  (residues 1 to 58)
  AUTHORS   Hakansson,K., Wang,A.H. and Miller,C.G.
  TITLE     The structure of aspartyl dipeptidase reveals a unique fold with a
            Ser-His-Glu catalytic triad
  JOURNAL   Proc Natl Acad Sci U S A 97 (26), 14097-14102 (2000)
   PUBMED   11106384
REFERENCE   2  (residues 1 to 58)
  AUTHORS   Lassy,R.A. and Miller,C.G.
  TITLE     Peptidase E, a peptidase specific for N-terminal aspartic
            dipeptides, is a serine hydrolase
  JOURNAL   J Bacteriol 182 (9), 2536-2543 (2000)
   PUBMED   10762256
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015534.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03575.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..58
                     /organism="Rothia dentocariosa"
                     /db_xref="taxon:2047"
     Protein         1..58
                     /product="Type 1 glutamine amidotransferase-like
                     domain-containing protein"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=6365
     Region          <7..>49
                     /region_name="PepE"
                     /note="Peptidase E [Amino acid transport and metabolism];
                     COG3340"
                     /db_xref="CDD:442569"
ORIGIN      
        1 malsvllril sffrrtelnl eeliyrqdii yigggntanl lavwrlhgls yggasdkg
//
LOCUS       WP_257962679             126 aa            linear   BCT 02-MAR-2025
DEFINITION  DJ-1/PfpI family protein [Rothia dentocariosa].
ACCESSION   WP_257962679
VERSION     WP_257962679.1
KEYWORDS    RefSeq.
SOURCE      Rothia dentocariosa
  ORGANISM  Rothia dentocariosa
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Rothia.
REFERENCE   1  (residues 1 to 126)
  AUTHORS   Ohnishi,Y., Yamazaki,H., Kato,J.Y., Tomono,A. and Horinouchi,S.
  TITLE     AdpA, a central transcriptional regulator in the A-factor
            regulatory cascade that leads to morphological development and
            secondary metabolism in Streptomyces griseus
  JOURNAL   Biosci Biotechnol Biochem 69 (3), 431-439 (2005)
   PUBMED   15784968
REFERENCE   2  (residues 1 to 126)
  AUTHORS   Halio,S.B., Blumentals,I.I., Short,S.A., Merrill,B.M. and
            Kelly,R.M.
  TITLE     Sequence, expression in Escherichia coli, and analysis of the gene
            encoding a novel intracellular protease (PfpI) from the
            hyperthermophilic archaeon Pyrococcus furiosus
  JOURNAL   J Bacteriol 178 (9), 2605-2612 (1996)
   PUBMED   8626329
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01965.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Rothia dentocariosa"
                     /db_xref="taxon:2047"
     Protein         1..126
                     /product="DJ-1/PfpI family protein"
                     /calculated_mol_wt=13904
     Region          <5..106
                     /region_name="GAT_1"
                     /note="Type 1 glutamine amidotransferase (GATase1)-like
                     domain; cl00020"
                     /db_xref="CDD:469582"
     Site            23
                     /site_type="active"
                     /note="conserved cys residue [active]"
                     /db_xref="CDD:153222"
ORIGIN      
        1 mnnlflqnla klvqqsqtcl avctgaalla atgvldgkpa ttnkrafewv rgtrpqvrwr
       61 qkarwvstek fytssgvsag mdmtlgfiad qwgletaqei asrceylwqn dpdtdpfahs
      121 aefesv
//
LOCUS       WP_257962757             389 aa            linear   BCT 02-MAR-2025
DEFINITION  GmrSD restriction endonuclease domain-containing protein [Rothia
            dentocariosa].
ACCESSION   WP_257962757
VERSION     WP_257962757.1
KEYWORDS    RefSeq.
SOURCE      Rothia dentocariosa
  ORGANISM  Rothia dentocariosa
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Rothia.
REFERENCE   1  (residues 1 to 389)
  AUTHORS   Gao,H., Gong,X., Zhou,J., Zhang,Y., Duan,J., Wei,Y., Chen,L.,
            Deng,Z., Wang,J., Chen,S., Wu,G. and Wang,L.
  TITLE     Nicking mechanism underlying the DNA phosphorothioate-sensing
            antiphage defense by SspE
  JOURNAL   Nat Commun 13 (1), 6773 (2022)
   PUBMED   36351933
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 389)
  AUTHORS   Machnicka,M.A., Kaminska,K.H., Dunin-Horkawicz,S. and Bujnicki,J.M.
  TITLE     Phylogenomics and sequence-structure-function relationships in the
            GmrSD family of Type IV restriction enzymes
  JOURNAL   BMC Bioinformatics 16, 336 (2015)
   PUBMED   26493560
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019151.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07510.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Rothia dentocariosa"
                     /db_xref="taxon:2047"
     Protein         1..389
                     /product="GmrSD restriction endonuclease domain-containing
                     protein"
                     /calculated_mol_wt=40867
     Region          47..>111
                     /region_name="Agg_substance"
                     /note="LPXTG-anchored aggregation substance; NF033875"
                     /db_xref="CDD:411439"
     Region          182..321
                     /region_name="DUF1524"
                     /note="Protein of unknown function (DUF1524); pfam07510"
                     /db_xref="CDD:462188"
     Region          352..387
                     /region_name="Excalibur"
                     /note="Excalibur calcium-binding domain; pfam05901"
                     /db_xref="CDD:428664"
ORIGIN      
        1 mlkilssrsg ahvfwpsasg qghssklgtr fsaaflalgl alsgcsseti tisestvsap
       61 stpsansaae hsstssqqpt vsaqeseqtp tvtevgespe ennadtstah pssqirpgtv
      121 tivnpdtssv epqgtapigs deasealril ntlpvkgrap ktgysraqfg dawsdidhng
      181 cdtrndilnr dltakqhkns rgcvvisgil ndpytgkvin fmrgkdtseq vqidhvvals
      241 dawqsgaqei saqerlqlan dpenllavdg panqqksdsd aatwlpanas frcsyvarqi
      301 rvkakyhlwv kpaekeamin vltpcagaaa kpapvpqvdt ppaqnpapal afqtcadara
      361 agyrnmhrga pgysdhldgd gdgiacesr
//
LOCUS       WP_257962810             232 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF7003 family protein [Bacillus halotolerans].
ACCESSION   WP_257962810
VERSION     WP_257962810.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046764.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22535.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         1..232
                     /product="DUF7003 family protein"
                     /calculated_mol_wt=26700
ORIGIN      
        1 mrklgkkeai lallndsfkk gefpficnsn fdfakgklsv fvdgdnwllt iqlfglsklg
       61 paidfyafgn qltnnvasyl vdepfcfvde ignqleledv epgftrkqis vflrertfqf
      121 fieqeiqaki isenewitcl rqmiknrlfl dalwltkqeq lqlaglscey dqlcsteswm
      181 hpeteknfps rspffqsiaq aicckdvtci qkhdegntdw atwtssdsve yy
//
LOCUS       WP_257962784             253 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6318 family protein [Rothia dentocariosa].
ACCESSION   WP_257962784
VERSION     WP_257962784.1
KEYWORDS    RefSeq.
SOURCE      Rothia dentocariosa
  ORGANISM  Rothia dentocariosa
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Rothia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040060.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19843.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Rothia dentocariosa"
                     /db_xref="taxon:2047"
     Protein         1..253
                     /product="DUF6318 family protein"
                     /calculated_mol_wt=26155
     Region          84..239
                     /region_name="DUF6318"
                     /note="Family of unknown function (DUF6318); pfam19843"
                     /db_xref="CDD:437675"
ORIGIN      
        1 mptrlphhis rraalgvlga gsaavvvgca pavkpadlgq gssssassss sassssssss
       61 astlpgnskn tgevklekyd tsagehqpat rtekpknvpk pllsdkanek tidglyenia
      121 yiaasmqylf qtgdmepfek calvssekss lssnttasem fkmikegnaw mdnptvvfsl
      181 ntstpsssgs syswggtmkm nmgsfvvvns mskdvesskq hvdtditfea lysgsswtir
      241 ssggaagsgg fsi
//
LOCUS       WP_257962849              43 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Neisseria sicca].
ACCESSION   WP_257962849
VERSION     WP_257962849.1
KEYWORDS    RefSeq.
SOURCE      Neisseria sicca
  ORGANISM  Neisseria sicca
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024908.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13518.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..43
                     /organism="Neisseria sicca"
                     /db_xref="taxon:490"
     Protein         1..43
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=5286
     Region          1..>43
                     /region_name="InsE"
                     /note="Transposase InsE and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2963"
                     /db_xref="CDD:442203"
ORIGIN      
        1 mtkytlhfky qavlhylhir sqqrtadhyg isrthlrrwi ray
//
LOCUS       WP_257962893             189 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF222 domain-containing protein [Corynebacterium amycolatum].
ACCESSION   WP_257962893
VERSION     WP_257962893.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium amycolatum
  ORGANISM  Corynebacterium amycolatum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (residues 1 to 189)
  AUTHORS   Davis,E.O., Dullaghan,E.M. and Rand,L.
  TITLE     Definition of the mycobacterial SOS box and use to identify
            LexA-regulated genes in Mycobacterium tuberculosis
  JOURNAL   J Bacteriol 184 (12), 3287-3295 (2002)
   PUBMED   12029045
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014741.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02720.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Corynebacterium amycolatum"
                     /db_xref="taxon:43765"
     Protein         1..189
                     /product="DUF222 domain-containing protein"
                     /calculated_mol_wt=20735
ORIGIN      
        1 mstpsasngg gplstsqvld avaqfealst vivenfevla pdhahdayks iekarkrlav
       61 idatyvetmk grmpsaehrr iawlaqemri sraearqrin vvgrlsrnvd pfapanedvr
      121 mpnlrqkvee gvvgadavak idkavrelpa tehaqlsrll dkhisdlvdk irvddlnklp
      181 nrlramlgg
//
LOCUS       WP_257962740             389 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleotide disphospho-sugar-binding domain-containing protein
            [Rothia dentocariosa].
ACCESSION   WP_257962740
VERSION     WP_257962740.1
KEYWORDS    RefSeq.
SOURCE      Rothia dentocariosa
  ORGANISM  Rothia dentocariosa
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Rothia.
REFERENCE   1  (residues 1 to 389)
  AUTHORS   Moncrieffe,M.C., Fernandez,M.J., Spiteller,D., Matsumura,H.,
            Gay,N.J., Luisi,B.F. and Leadlay,P.F.
  TITLE     Structure of the glycosyltransferase EryCIII in complex with its
            activating P450 homologue EryCII
  JOURNAL   J Mol Biol 415 (1), 92-101 (2012)
   PUBMED   22056329
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018434.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06722.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Rothia dentocariosa"
                     /db_xref="taxon:2047"
     Protein         1..389
                     /product="nucleotide disphospho-sugar-binding
                     domain-containing protein"
                     /calculated_mol_wt=42269
     Region          8..380
                     /region_name="GT1_Gtf-like"
                     /note="UDP-glycosyltransferases and similar proteins;
                     cd03784"
                     /db_xref="CDD:340817"
     Site            order(17,91,376..377,380)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:340817"
     Region          <199..367
                     /region_name="YjiC"
                     /note="UDP:flavonoid glycosyltransferase YjiC, YdhE family
                     [Carbohydrate transport and metabolism]; COG1819"
                     /db_xref="CDD:441424"
     Site            order(229,291,293,295..296)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
ORIGIN      
        1 mgettrsiei arvaqdrghk vlfhiyspky rgllesarlp vhlrepimtd aeakqlmald
       61 qgrgvrhpft tekvrqrvtv elaairdfna davvigsnpt mlisariagv pifyarpyay
      121 sttyfsakpa geapaapgwl ralartisyk pasftrvare ygiklprrti dmfsadvnli
      181 cslftelrgd sltapdisvg piyyrapgel pqivrepkkr pliyvgmgss gsarilaavl
      241 rqlstapvdv lvgdgvllad adarslgdni hragtvpahl laghidasit hggegtvqta
      301 clagvpfagi amqaeqrwni eecarygnal hfakhdvhrg qmhgildrll sdetmrakar
      361 qlskamrgmd gptravevie gylkdcnpa
//
LOCUS       WP_257963051             149 aa            linear   BCT 02-MAR-2025
DEFINITION  integrase core domain-containing protein, partial [Micrococcus
            luteus].
ACCESSION   WP_257963051
VERSION     WP_257963051.1
KEYWORDS    RefSeq.
SOURCE      Micrococcus luteus
  ORGANISM  Micrococcus luteus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Micrococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025063.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13683.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Micrococcus luteus"
                     /db_xref="taxon:1270"
     Protein         <1..149
                     /product="integrase core domain-containing protein"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <39..137
                     /region_name="DDE_3"
                     /note="DDE superfamily endonuclease; cl46863"
                     /db_xref="CDD:481203"
ORIGIN      
        1 anqmastgqf pwpslgsphg rqrvipwppm gsfswplths dagsqftsir ygerlaeiga
       61 tpsigtvgds ydnalaetvn gyykaehvrg parpgpwrtv edlelatlgw vswhntqrlh
      121 gylgdvppae fedtfyavea greqlvgik
//
LOCUS       WP_257963147             774 aa            linear   BCT 02-MAR-2025
DEFINITION  5'-nucleotidase C-terminal domain-containing protein [Micrococcus
            luteus].
ACCESSION   WP_257963147
VERSION     WP_257963147.1
KEYWORDS    RefSeq.
SOURCE      Micrococcus luteus
  ORGANISM  Micrococcus luteus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Micrococcus.
REFERENCE   1  (residues 1 to 774)
  AUTHORS   Knofel,T. and Strater,N.
  TITLE     X-ray structure of the Escherichia coli periplasmic 5'-nucleotidase
            containing a dimetal catalytic site
  JOURNAL   Nat Struct Biol 6 (5), 448-453 (1999)
   PUBMED   10331872
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014871.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02872.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Micrococcus luteus"
                     /db_xref="taxon:1270"
     Protein         1..774
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /GO_process="GO:0009166 - nucleotide catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=79964
     Region          61..592
                     /region_name="UshA"
                     /note="2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or
                     3'-nucleotidase, 5'-nucleotidase family [Nucleotide
                     transport and metabolism, Defense mechanisms]; COG0737"
                     /db_xref="CDD:440500"
     Region          539..>722
                     /region_name="Chi1"
                     /note="Chitinase [Carbohydrate transport and metabolism];
                     COG3469"
                     /db_xref="CDD:442692"
ORIGIN      
        1 mdsarhpavh rrrtsvithp geshahslfr rravttaact vlvlapasaa palavetaaa
       61 dettisilsf ndfhgalsgd yigtqfadtv edyrtafeae hgagstllts agdliggsks
      121 vsnvqqdnpt idvmnalgla sltagnhefd kglddlqgrv esraqfpvls anlvdptske
      181 pvltshavfd vdgvrvavig aspnelyatt tgaglkgnev ldevaavnav adelaaqdaa
      241 dvivasyhdg aagagelaae raaraefdri vgetssavdv ifnahthqly qydttaggah
      301 rpviqagasg shlaaveltv gadgevtglt prlltrstqa paeaaaespv taqvyaieqe
      361 avavfedlqg evvadlsasi ttdyqklida ggswkaggtr aaettlgtwv gdavkhaaeq
      421 anpevdlgvt npgglrsell tdrftdggaf pakpadlvgr ltlgelldma pfgntityfd
      481 ipgssiklal eenwrndvrk ftlgwseelt wtydesrpqg dkvtgvwidg eplqadrmyt
      541 vasqsfladd twttlgdptk apdgytafat grqnfvnmgl ldsqaitdya raqdaahgav
      601 apdfgkngvp vtdapasvea gqavgltlgd lvvdsdgapa atavdvafrt tdgaetalgt
      661 vavptgsetv tlsgitapaa agtgelvmtv ryadgsttvv rhalevtaap tptepeqpap
      721 thpgkghdkg adhpgkgrvk gedhpgkgrg vqrgaathpv fsahawltaa glpr
//
LOCUS       WP_257962459             117 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: swarming motility protein SwrAA [Bacillaceae].
ACCESSION   WP_257962459
VERSION     WP_257962459.1
KEYWORDS    RefSeq.
SOURCE      Bacillaceae
  ORGANISM  Bacillaceae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales.
REFERENCE   1  (residues 1 to 117)
  AUTHORS   Mukherjee,S., Bree,A.C., Liu,J., Patrick,J.E., Chien,P. and
            Kearns,D.B.
  TITLE     Adaptor-mediated Lon proteolysis restricts Bacillus subtilis
            hyperflagellation
  JOURNAL   Proc Natl Acad Sci U S A 112 (1), 250-255 (2015)
   PUBMED   25538299
REFERENCE   2  (residues 1 to 117)
  AUTHORS   Mordini,S., Osera,C., Marini,S., Scavone,F., Bellazzi,R.,
            Galizzi,A. and Calvio,C.
  TITLE     The role of SwrA, DegU and P(D3) in fla/che expression in B.
            subtilis
  JOURNAL   PLoS One 8 (12), e85065 (2013)
   PUBMED   24386445
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 117)
  AUTHORS   Ogura,M. and Tsukahara,K.
  TITLE     SwrA regulates assembly of Bacillus subtilis DegU via its
            interaction with N-terminal domain of DegU
  JOURNAL   J Biochem 151 (6), 643-655 (2012)
   PUBMED   22496484
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036587.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17423.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Bacillaceae"
                     /db_xref="taxon:186817"
     Protein         1..117
                     /product="swarming motility protein SwrAA"
                     /calculated_mol_wt=13964
     Region          3..113
                     /region_name="SwrA"
                     /note="Swarming motility protein; pfam17423"
                     /db_xref="CDD:407493"
ORIGIN      
        1 mkkrasvmre qtyrhlaeef kmrlqtsnss hakvskwvql fcmylanyte vkklqeidkv
       61 ciqeyfhylt enykrlslnl tdikrsmqli eevldikvdd slldfslsnl hlwsklk
//
LOCUS       WP_257963170             286 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail tip lysozyme [Facklamia hominis].
ACCESSION   WP_257963170
VERSION     WP_257963170.1
KEYWORDS    RefSeq.
SOURCE      Facklamia hominis
  ORGANISM  Facklamia hominis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Aerococcaceae; Facklamia.
REFERENCE   1  (residues 1 to 286)
  AUTHORS   Xiang,Y., Morais,M.C., Cohen,D.N., Bowman,V.D., Anderson,D.L. and
            Rossmann,M.G.
  TITLE     Crystal and cryoEM structural studies of a cell wall degrading
            enzyme in the bacteriophage phi29 tail
  JOURNAL   Proc Natl Acad Sci U S A 105 (28), 9552-9557 (2008)
   PUBMED   18606992
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037025.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18013.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Facklamia hominis"
                     /db_xref="taxon:178214"
     Protein         1..286
                     /product="phage tail tip lysozyme"
                     /calculated_mol_wt=32257
     Region          4..149
                     /region_name="Phage_lysozyme2"
                     /note="Phage tail lysozyme; pfam18013"
                     /db_xref="CDD:465617"
     Region          <150..273
                     /region_name="PRK06347"
                     /note="1,4-beta-N-acetylmuramoylhydrolase"
                     /db_xref="CDD:180536"
ORIGIN      
        1 mdsnakiiwd yltshgwsqe avagilgnme vetgiepnlh eygggtgygl vqwtpgtrli
       61 nwahqngldp sniytqlkrl efevenchis sinpyidklg vgnfrdftkl rkspeemari
      121 fvinyerpsn egmklekrqa aarrwydkfs ggssyvpsts kstdniqyyt vqagdsywai
      181 srkfgltvdq llemnnfdan hiihpgdrli vkkevsrpip tppsgesiqy ytvqagdsyw
      241 gisrkfgltv dqllemnnfa anhiihpgdr livgysslds kiklek
//
LOCUS       WP_257963173             493 aa            linear   BCT 02-MAR-2025
DEFINITION  L-lactate permease [Micrococcus luteus].
ACCESSION   WP_257963173
VERSION     WP_257963173.1
KEYWORDS    RefSeq.
SOURCE      Micrococcus luteus
  ORGANISM  Micrococcus luteus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Micrococcus.
REFERENCE   1  (residues 1 to 493)
  AUTHORS   Dong,J.M., Taylor,J.S., Latour,D.J., Iuchi,S. and Lin,E.C.
  TITLE     Three overlapping lct genes involved in L-lactate utilization by
            Escherichia coli
  JOURNAL   J Bacteriol 175 (20), 6671-6678 (1993)
   PUBMED   8407843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014683.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02652.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Micrococcus luteus"
                     /db_xref="taxon:1270"
     Protein         1..493
                     /product="L-lactate permease"
                     /GO_component="GO:0005886 - plasma membrane [Evidence
                     IEA]"
                     /GO_function="GO:0015129 - lactate transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0015727 - lactate transport [Evidence
                     IEA]"
                     /calculated_mol_wt=49019
     Region          49..489
                     /region_name="LldP"
                     /note="L-lactate permease [Energy production and
                     conversion]; COG1620"
                     /db_xref="CDD:441227"
ORIGIN      
        1 mvrsggvpvq vllaltpill tlallltrlp awvapaaggv laaalaptvf gvdpgvlaae
       61 vgrgvptvve ilaiiaggit lsrvmehsga harlalwlsa gngptlatal lmvhgiipfl
      121 etvtgfgvsl ivgvplllgl gftafrsall avlaltigpw gsmapgtlmg arlydldfqa
      181 vgvtaalfnl paslvagaat vlllrgaqgm rgdgepartv pwlavgllsg aaqwalilga
      241 nlsvgtapag avgtfvltva wllvirrgrl tpgpgrdvvp yvtlmagtvl gttvedalgl
      301 tgvlsvvgtp alwsfvavga gvallglgph arrtvpgeaa rlwvgtaipn alyvafgltl
      361 saggvsqala galsgmgpay laaipvigaf sgfvtasntg amalmgplqm dtgaalgvpp
      421 twtnglhnaa agwgiiagpa riqvahamav gaqtpempgw avsrrallav llpamvvgia
      481 lmsllglavl prv
//
LOCUS       WP_257963174             213 aa            linear   BCT 02-MAR-2025
DEFINITION  integrase core domain-containing protein, partial [Micrococcus
            luteus].
ACCESSION   WP_257963174
VERSION     WP_257963174.1
KEYWORDS    RefSeq.
SOURCE      Micrococcus luteus
  ORGANISM  Micrococcus luteus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Micrococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025063.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13683.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Micrococcus luteus"
                     /db_xref="taxon:1270"
     Protein         <1..213
                     /product="integrase core domain-containing protein"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <6..209
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 alaptlnsrp erppswsrsa rhwpldsnrs ihysgldlkk igripdgggw rahgrdsena
       61 raakrgpgrr vgytylhsai dgftrlayte aledertvtt igffcraraf faahgiridr
      121 vvtdngnnyr aaeftrkvvs lggrhhrirp ytprhngkve rynrlmvdev lyarpytset
      181 arrealavwv nhynyhrpht scgdappasl apa
//
LOCUS       WP_257963232            2941 aa            linear   BCT 02-MAR-2025
DEFINITION  putative Ig domain-containing protein [Facklamia hominis].
ACCESSION   WP_257963232
VERSION     WP_257963232.1
KEYWORDS    RefSeq.
SOURCE      Facklamia hominis
  ORGANISM  Facklamia hominis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Aerococcaceae; Facklamia.
REFERENCE   1  (residues 1 to 2941)
  AUTHORS   Bentley,S.D., Maiwald,M., Murphy,L.D., Pallen,M.J., Yeats,C.A.,
            Dover,L.G., Norbertczak,H.T., Besra,G.S., Quail,M.A., Harris,D.E.,
            von Herbay,A., Goble,A., Rutter,S., Squares,R., Squares,S.,
            Barrell,B.G., Parkhill,J. and Relman,D.A.
  TITLE     Sequencing and analysis of the genome of the Whipple's disease
            bacterium Tropheryma whipplei
  JOURNAL   Lancet 361 (9358), 637-644 (2003)
   PUBMED   12606174
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017183.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05345.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2941
                     /organism="Facklamia hominis"
                     /db_xref="taxon:178214"
     Protein         1..2941
                     /product="putative Ig domain-containing protein"
                     /calculated_mol_wt=316283
     Region          478..579
                     /region_name="RibLong"
                     /note="Long Rib domain; pfam18957"
                     /db_xref="CDD:436864"
     Region          585..680
                     /region_name="RibLong"
                     /note="Long Rib domain; pfam18957"
                     /db_xref="CDD:436864"
     Region          686..782
                     /region_name="YPDG_rpt"
                     /note="YPDG domain; NF038186"
                     /db_xref="CDD:439498"
     Region          785..860
                     /region_name="Rib"
                     /note="Rib domain; pfam08428"
                     /db_xref="CDD:462474"
     Region          1046..1124
                     /region_name="Rib"
                     /note="Rib domain; pfam08428"
                     /db_xref="CDD:462474"
     Region          <2070..2237
                     /region_name="YbbR"
                     /note="Cyclic di-AMP synthase regulator CdaR, YbbR domain
                     [Signal transduction mechanisms]; COG4856"
                     /db_xref="CDD:443884"
     Region          2634..2705
                     /region_name="aRib"
                     /note="Atypical Rib domain; pfam18938"
                     /db_xref="CDD:465921"
     Region          2725..2796
                     /region_name="aRib"
                     /note="Atypical Rib domain; pfam18938"
                     /db_xref="CDD:465921"
     Region          2815..2886
                     /region_name="aRib"
                     /note="Atypical Rib domain; pfam18938"
                     /db_xref="CDD:465921"
     Region          2904..2941
                     /region_name="Gram_pos_anchor"
                     /note="LPXTG cell wall anchor motif; pfam00746"
                     /db_xref="CDD:366278"
ORIGIN      
        1 mlglskpsdi rgsgwtfkne tqlqewiaeq vaadkdkwia etvsavtnae gdykiqfkgt
       61 wgperndssv anservagkf yakdghtwtq eevdrlgtva ehadegsflt galnhnekhv
      121 ntdwlfistk dtddvvkrtp wnynwytgsn nawgihggwa qaafgvstvq aanstradfn
      181 lapaeikfni tnfdtqknta apgdvaktnt qglpykntnd sfkivwydqd gnkikeeptq
      241 kptstgalae atydttgvte tktfiaklhy vkpggglgqv laqdaftvkv grivvsaydd
      301 vnianpaand ksmegatysa eglpegltid ektgtvsgka kvpgkytvtv ttsildeesg
      361 etmeatsnyt slvtdspleh gevgveykkt vkpaevegyv fknvsanfie gkviegltit
      421 gdqisgtpka evaatqeepn vevtydiykl nskgeevlik eghkdlvple itkaaaqapk
      481 yepayadtda tpgtevttda pkfldqkste atkpeakpqp tnvkfalgdg apqgatidai
      541 tgavtytpta rdanttvdip vkvtysdgti detfakikvg qaqvesyqpe yteadakagt
      601 qttitapnft dkdgqpaakp egakftlakd aptdatineg tgeitykpsi dqaghtvnip
      661 vivtykdgst devkapvrva eadnlnyepd yksvvaqvah pvtveapkfl dkenkeaipq
      721 ptgmtfaiee gftvngniei nsstgeityt avdadkntvi evpvivtyad gskesvkaki
      781 dvpsdanfyd pkakpltteq gtvpvakdgv efeftppadt kfewevqppv skagetsglv
      841 kitypdgttd tvevpvtvta nestktivdg snikpvdptd niqstgitvt npddttkvsa
      901 tdangesvpa vinketgqie vtpgtdakgp itvtvtdddf pteetfkvpv keksatpvit
      961 epkagdqtis gtgiagsqit laiyggegse dtqvannivv gqdgtwtanv pagvnlneyd
     1021 iilatqteqg ksvsdearva vqaltdaekn npeavanpie tevgkvpeak ngianigeld
     1081 nvegvvwltn pdvskvadnv kgtavvvykd gsidkvevpi kvvdktapvi dkignqtvve
     1141 gkpiadvtvt tddpeakisi egqpdgvtve gnkisgtptv sdwgkdeekd ftvkvtaede
     1201 agnksetefa itvqrdtdgd gtpdiydndd dgdgvsdede kkagtdpknk ddkpadkdtt
     1261 apkidrigdq tvvekqpike ievkiddpea eitvdglpdd vtydkdtkki tgspeikdwd
     1321 dsdkenpeev revsvkvtak dkagnestee ftitvqrdtd gdgtpdiydk dddgdgvsde
     1381 dekkagtdpk nkddkpadkd ttapkidris gqtvvekqpi keievktddp eaeitvdglp
     1441 dgvtydkdsk kitgspeikd wddsdkenpe evrevsvkvt akdkagnest eeftitvqrd
     1501 tdgdgtpdiy dkdddgdgvd ddkekeagtn pkdkdskpet paekdteapk idrigdqtvv
     1561 ekqpikeiev ktddpeaeit vdglpngvtf dkdskkitgs peikdwddsd kekleevrev
     1621 kvkvtakdkd gnesteefti tvqrdtdgdg tpdiydkddd gdgvdddkek eagtnpkdkd
     1681 skpetpaekd ttapkidrig dqtvvekqpi egievktddp eaeitveglp ngvtfdkdsk
     1741 kitgspeltd wndtdkdnpe evrevkvtvk akdkagnese ehftitvqrd tdgdgipdvy
     1801 dkdddgdgip ddkdnnpkva dkttvdetgk kpvkpngeeq gtgvkvensg ddttvtatdk
     1861 ngkdvpatid petgeikvtp gkdvegpitv vvtdkdlpdg ktkveievek peekdttapk
     1921 idrigdqtvv ekqpiegiev ktddpeaeit vdglpngvtf nkdskkitgs peltdwndtd
     1981 kdnpeevrev kvtvkakdka gneseehfti tvqrdtdgdg ipdvydkddd gdgipddkdn
     2041 npkvadkttv detgkkpvkp ngeeqgtgvk vensgddttv tatdkngkdv patidpetge
     2101 ikvtpgkdve gpitvvvtdk dlpdgktkve ievekpeekd ttapkidrig dqtvvekqpi
     2161 egievktddp eaeitvdglp ngvtfdkdsk kitgspeikd wndddkenpe evrevsvkvt
     2221 akdkagnest eeftitvqrd tdgdgtpdiy dkdddgdgvs dedekkagtd pknkddkpad
     2281 kdttapkidr igdqtvvekq pikdievktd dpeaeitvdg lpngvtfdkd snkitgkpei
     2341 tdwsdddken peevrevpvk vtakdkagne steeftitvq rdtdgdgtpd iydndddgdg
     2401 vsdedeknke tdpkdkdskp eedktsvdss nvtpvdptnd kqstgikven pdkdttevta
     2461 tdedgnpipa vinpetgeie vtpgknvdgp ikvvitdkdl pdgkvevevp vngheagkdd
     2521 ngsdktedge tyvtgttkpv dpkneeqetg lvvknpddst eitakdedgn dvparideng
     2581 nivvtpgenv dgpitvtvtd kdlpngsqsf evpvndhekg kddngsestd adkitptipt
     2641 ektgvkdldn ltdkekeevk gkiedankdk fpegtdvsvd dkgkatityp dgskdtipae
     2701 dlvfqyehgd aeehekpelp isdiidpnvp dktevddkdh ltdgekedik nkieeankdn
     2761 fpegtdvsvd dkgnatityp dgskdiipad qlvvgkdkgd ssddqtsdst iadeidptip
     2821 adktlvddkn hltedekakv kkaieeankd kfpagtkvei gndgtatity pdgsqdviag
     2881 sllvveraad gqasgsneqt hadaatlpqt gendstvilg aaalsilagl glvasrrkee
     2941 e
//
LOCUS       WP_257963260              73 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4368 domain-containing protein [Aerococcus christensenii].
ACCESSION   WP_257963260
VERSION     WP_257963260.1
KEYWORDS    RefSeq.
SOURCE      Aerococcus christensenii
  ORGANISM  Aerococcus christensenii
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Aerococcaceae; Aerococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025645.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14287.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Aerococcus christensenii"
                     /db_xref="taxon:87541"
     Protein         1..73
                     /product="DUF4368 domain-containing protein"
                     /calculated_mol_wt=8473
     Region          6..68
                     /region_name="DUF4368"
                     /note="Domain of unknown function (DUF4368); pfam14287"
                     /db_xref="CDD:433840"
ORIGIN      
        1 mdnnnknkid tnnflkmikk ytdieelttp minefiekii ahgatrgrkg eqrkqeihvy
       61 fnfigdfkni evg
//
LOCUS       WP_257963316             155 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Aerococcus
            christensenii].
ACCESSION   WP_257963316
VERSION     WP_257963316.1
KEYWORDS    RefSeq.
SOURCE      Aerococcus christensenii
  ORGANISM  Aerococcus christensenii
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Aerococcaceae; Aerococcus.
REFERENCE   1  (residues 1 to 155)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 155)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 155)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 155)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Aerococcus christensenii"
                     /db_xref="taxon:87541"
     Protein         1..155
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=17832
     Region          <5..151
                     /region_name="Uup"
                     /note="ATPase components of ABC transporters with
                     duplicated ATPase domains [General function prediction
                     only]; COG0488"
                     /db_xref="CDD:440254"
ORIGIN      
        1 mlenngsgkt tllnmilhke vwvhpnlrmg yysqleetln yektildnil pysiydqsmt
       61 riilaclgfk indvfkkvqv lsdgekskvk laklltddfn ylmmdeptnf ldlhaievle
      121 gllqgydrpl lfvthdvsfi nhiadslllv eydqf
//
LOCUS       WP_257963320             765 aa            linear   BCT 02-MAR-2025
DEFINITION  pectinesterase family protein [Bifidobacterium longum].
ACCESSION   WP_257963320
VERSION     WP_257963320.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium longum
  ORGANISM  Bifidobacterium longum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013276.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01095.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Bifidobacterium longum"
                     /db_xref="taxon:216816"
     Protein         1..765
                     /product="pectinesterase family protein"
                     /GO_function="GO:0030599 - pectinesterase activity
                     [Evidence IEA]"
                     /GO_process="GO:0042545 - cell wall modification [Evidence
                     IEA]"
                     /calculated_mol_wt=79341
     Region          <59..>282
                     /region_name="PRK08026"
                     /note="FliC/FljB family flagellin"
                     /db_xref="CDD:236140"
     Region          311..641
                     /region_name="PemB"
                     /note="Pectin methylesterase and related acyl-CoA
                     thioesterases [Carbohydrate transport and metabolism,
                     Lipid transport and metabolism]; COG4677"
                     /db_xref="CDD:443713"
ORIGIN      
        1 mkntiiraag vllaasmifg gaaatasaae atspstgtts stqaaesinr ewvlnpannt
       61 elaalgtiqg gsqtfdglti datangakfa prandtqina gtiisipvpa htntatitla
      121 lsggtttita dagevssdnt vialpaaesa rtvnvtftaq tylngialae qqpepefpgt
      181 ptvaakdtnw dftetgidrp avqgatdnyq gvaidaraqg akfnprttaa sggsdtqvna
      241 gtilyipvaq aeggatvtvk gqlygptlkl dgtdittgta vtiatdstry vplsvegtgs
      301 lyltgiaidy aagspaatsh tvtvgpngqy rtiqaaldan dssetdrlvl kitpgdyrek
      361 itvtkpgvtf anadvtakra vtirasyyss ntfdadgkfv pqdefdlgtn kcatvtigag
      421 atgfsaygit fqndynvvdh taageqtpav alntqadkvy lknsriigrq dtlyvqgagn
      481 rvyvdggyie gtvdfvfgda nayfagtelh maafagknng yftaantkks gvglvfdrcn
      541 ltvaaayddd aklslgrpwq tfaqytqvrk gdgssyvtgv dlgtknsayt dtssavtyld
      601 stmsskitkn rwnvwtsknq sgksvdvtfh ddvrfaeyas hdetgalldp adyknvvlgs
      661 msaldeaqvq akraellaal gfgsaagqwv vpdgawpfay dpnystgtdv qptqpggnas
      721 pnadsaakad tmpetgsaii avvvvavpll vaglalvavr rnrqq
//
LOCUS       WP_257963326             141 aa            linear   BCT 02-MAR-2025
DEFINITION  alanine:cation symporter family protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257963326
VERSION     WP_257963326.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013406.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01235.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..141
                     /product="alanine:cation symporter family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA]"
                     /GO_function="GO:0015655 - alanine:sodium symporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /GO_process="GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /GO_process="GO:0032328 - alanine transport [Evidence
                     IEA]"
     Region          <27..114
                     /region_name="Na_Ala_symp"
                     /note="Sodium:alanine symporter family; cl00548"
                     /db_xref="CDD:469815"
ORIGIN      
        1 wlmmslwdal rmnmmisyqe lvrtflssiv anyvyaennl vflrldkpry iwglriltvl
       61 mvllgtmvsl pvvwqsadii malmamtnlt ailllsptvr iiasdylrqr rlgiqptfda
      121 trypdidqql apgawnelpr e
//
LOCUS       WP_257963355            2292 aa            linear   BCT 02-MAR-2025
DEFINITION  InlB B-repeat-containing protein [Bifidobacterium longum].
ACCESSION   WP_257963355
VERSION     WP_257963355.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium longum
  ORGANISM  Bifidobacterium longum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (residues 1 to 2292)
  AUTHORS   Bleymuller,W.M., Lammermann,N., Ebbes,M., Maynard,D., Geerds,C. and
            Niemann,H.H.
  TITLE     MET-activating Residues in the B-repeat of the Listeria
            monocytogenes Invasion Protein InlB
  JOURNAL   J Biol Chem 291 (49), 25567-25577 (2016)
   PUBMED   27789707
REFERENCE   2  (residues 1 to 2292)
  AUTHORS   Ebbes,M., Bleymuller,W.M., Cernescu,M., Nolker,R., Brutschy,B. and
            Niemann,H.H.
  TITLE     Fold and function of the InlB B-repeat
  JOURNAL   J Biol Chem 286 (17), 15496-15506 (2011)
   PUBMED   21345802
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021028.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09479.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2292
                     /organism="Bifidobacterium longum"
                     /db_xref="taxon:216816"
     Protein         1..2292
                     /product="InlB B-repeat-containing protein"
                     /calculated_mol_wt=246426
     Region          1603..1666
                     /region_name="Flg_new"
                     /note="Listeria-Bacteroides repeat domain (List_Bact_rpt);
                     pfam09479"
                     /db_xref="CDD:462813"
     Region          <1791..1826
                     /region_name="Flg_new"
                     /note="Listeria-Bacteroides repeat domain (List_Bact_rpt);
                     pfam09479"
                     /db_xref="CDD:462813"
     Region          1833..1901
                     /region_name="Flg_new"
                     /note="Listeria-Bacteroides repeat domain (List_Bact_rpt);
                     pfam09479"
                     /db_xref="CDD:462813"
     Region          2086..2131
                     /region_name="Flg_new"
                     /note="Listeria-Bacteroides repeat domain (List_Bact_rpt);
                     pfam09479"
                     /db_xref="CDD:462813"
ORIGIN      
        1 mhawlkrava gllsagtllg gglltagtan adeirmpdig ktitsltasa attyprelvn
       61 ggfdylpdgg wktvdapsym tnaytsvdpn ngqymrnakh sdadlaswvd wpgfdqskfa
      121 wktdqkgghd qgglkdraea velqqdsmdg ntyaemvase pgrtiyqnla tipgtlykir
      181 lkhtslckdn vdqmqvving tpiemtrvaa ngkagdkvge ksktigtrvt nenrwhhsdq
      241 wetyegyyvi pdgqtttrfg fkavnyldpt kgnllddvtf arayklsydk nasdatgkvp
      301 sdetadtvrq tkakttgtvk tvadenvryg slangdfsyp sfsdiqeneq gthadlrtfl
      361 ksddgtlwyn msvtdlskyg kigqipgfds srfawssten gsrvelqqdr ntkntyaeiv
      421 aqqdntsiyq nvstgnggvl ykirlkhasr qsshadkmqv lvgsdtahat pvemtrvtsn
      481 ghgdkvggks ttittkvsnt dprdhgsqwe tyegyyqvpe gqkntvfmfk slegfkeyet
      541 lpgnnvgnlv ddiefsrsyk ltydknasda tgkvpsnqrg kenavepaes kttgnvktva
      601 dntsnlpdhl vngtfdyrgn eiinenqrvy gdttylaiis aktgvignpl hskldnwdsg
      661 kfgwksndat agvdtvevqr rnhtpyptna gnvwgeiaaa kqgkyiyqdi attpgvvykw
      721 slkhasrnad qddsmqvmig epgaeavqea trttsngtdk vgeksttitt hgtaqdgkwe
      781 tytgdylats tttrftfrsv rdsngqgldf taegncvddl sfdkayrlsy dknasdatgk
      841 vpsnqrgkvn tvqpaksktt gsvglaadkt asgltvhdlk kndkgkvpss skadstqpaa
      901 fkapdakvet iasraagdem avnggfdtpk wtiakegqgl pwvyvtpnkg mirsyaqama
      961 gqtgvkaggl taatfawqdv datggiqnfe lhrekdgnta advhagrtva qtvnttpgas
     1021 ytfsirhsgr skgnaggvtl ltgpdkdhlt pvkltrttvs ktgqkygdkt gdvgtvayth
     1081 sdsmdategs hepwdhsddw esyegtviip agqsrtmiay rgvakdgtlt asandsiidd
     1141 lsfrlaykls ydanggakks tsqikastdg kvktiagktd slptelvngs fdypagliag
     1201 vstkypwddw tvvdpingry arhigidkdp wapipgwdas kfawkstqtk gtdwqqiaqg
     1261 velqkdsktg nqyaelvagq agtaiyqdia tipgvsyrwt lkhasldrnh ldgmsvmige
     1321 pgkesaqdar rttvngngdq pgdvgkvist kvsndaesnh esnhssrnhd gqwetytgty
     1381 iatgtvtrft fksvsssnnv ngnilddlsf tkayrlgydg nggtgqvpsr tetgrtetaa
     1441 sgtdgtvrla adksaepesg tiaddrrvlt dttarqddgt sqrtitrsdg svrvetiatt
     1501 gavsgcqvyy pagtritlat akadsdcwds sqigktnrtf ygwsantdan drdvpvgdtm
     1561 drntlnanvr teivmparak tvyalwainp tlsysvnapa gsnapgtpas qtvpyntaaa
     1621 dksgwaagdt gkipgyrfdg wytapnggnk ydfntpltgn vtvyahwvgn gytvrfagng
     1681 atgggtpdqa fqynigqnlh rngfvrdgyt ftgwkradnq qaygdgqwvt nlttqpdgiv
     1741 tmvaqwsane ahirynpnpp agktaggqgt pnwdghtgdt piigqngwti dgytfagwat
     1801 spdgsgarya pgarwtangt ltlyaqwtpg qasltydgng atggktdpqt gktdekinvr
     1861 dngftrdgyt fvtwntqadc kgnavkpnse wtlrgsstly acwagnaqtl tyhgngatgg
     1921 ntaaqsgktg delttnangf trdgytfvrw dtakdgsgta ygegkngvsq yvmkpagndl
     1981 yaiwkanpat iqyrndwpnt tgstpdttgn tgdtvtisqn sfdrpgytft gwstskrgdp
     2041 slqpgdkhtl eprtttvwaq wkadpahlvy nsnigtvgse tktvdgvvdq tvktitnpfd
     2101 rpgytfsgwn tqadgkgkay atgadyvlta ndkstpknts vlyaqwking aslkfnpngg
     2161 ighvddvtgd afstvtipgd akepkitrpg yrfvgwstek nppagstflq pgegkvtlpa
     2221 egsttvyaqw epslttlpft ggqaqvptiw lyagfalmli algvmmpmlr mrmaatkrtg
     2281 khmpitggkh ak
//
LOCUS       WP_257963398             623 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein [Brevibacterium
            ravenspurgense].
ACCESSION   WP_257963398
VERSION     WP_257963398.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium ravenspurgense
  ORGANISM  Brevibacterium ravenspurgense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
REFERENCE   1  (residues 1 to 623)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Brevibacterium ravenspurgense"
                     /db_xref="taxon:479117"
     Protein         1..623
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /calculated_mol_wt=65022
     Region          1..608
                     /region_name="MenD"
                     /note="2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-
                     carboxylate synthase [Coenzyme transport and metabolism];
                     COG1165"
                     /db_xref="CDD:440779"
ORIGIN      
        1 mntstaaart ialnliqrgl ehvviapgsr sapltyafae ladaglvnth vriderdaaf
       61 fglglakglr rtavaeaava eaagetgsaa gdtaprtpgl vavlttsgta vanlhpavle
      121 asysqiplli lsadrperlr rtganqtidr qshllsdvrl rfdvpveade asltsavhaa
      181 aaavvgsega gagmnapyam ssglrglstp gpvqfnvqfd geltpeaedm pwrpefgeve
      241 rlehrphvha gfaqalemls rpgtvllagn dcdygarrve elaaafgvpv faepssplfh
      301 lsvpghpgvl dgnltetitg vvrtgrltqy rqdqrllarv ptaeiqadld waladeygsy
      361 lasagltgqa adadtqrwar saaseshiqr aagvretlls rstgeiadql svtsdihsqh
      421 raaaakwhev pptsaeqptg avvvgeivrg aaqnaaergt vaqvflassn sgryasalag
      481 dealehvqms asrglagidg liataagmal tgpvskecpl rliigdvaal hdvggllreg
      541 addglptlqi fvlnddggai fgglehgaeh lsghfaryfa trhgrnfral aeaydwpyqp
      601 atvdglrrla kagsaglcev pld
//
LOCUS       WP_257963428             513 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Brevibacterium ravenspurgense].
ACCESSION   WP_257963428
VERSION     WP_257963428.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium ravenspurgense
  ORGANISM  Brevibacterium ravenspurgense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
REFERENCE   1  (residues 1 to 513)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Brevibacterium ravenspurgense"
                     /db_xref="taxon:479117"
     Protein         1..513
                     /product="AMP-binding protein"
                     /calculated_mol_wt=56160
     Region          49..509
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(172,175..180,182..183)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(175,288..289,310..315,391,403,406,417,502)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(175,215..216,264,266..267,270,288..289,310..315,391,
                     403,406,414..417,483)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(215,266..267,270,288,414..416,477,483)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
ORIGIN      
        1 maidqttvdt wleevlagdv dvaaklcdsh pqdavaftfv dhdlnvaklt ygqleersrk
       61 laghfkaqgi gegdrvgvll tkreelvvtl valvrlgavy iplftafatp avemrmkasd
      121 aklvvtedsq lfkveplglp ifmageeyqr aletaepvte nylaapdhpf lqlytsgttg
      181 apkgvpvpvr alaafktymr isldvrdddv fwnaadpgwa yglyygvvgp laigvpnily
      241 tgkagpedtl rvltvlgvtn fagaptlyrt lakadtdqka nlrrassage pltadilaws
      301 pdalgcevrd qygqtelgmv icshwadgyr qpvkkgsmgr pmpgivadvi egviaidtqn
      361 spnfwfmgyh nepertavry sddgrwyltg dlgridedgd vffasrdddl ilmagyrisp
      421 fdvesvlveh dsvadvavvg rpdpegvrge iaeafivlrs gwtgsdelak elqqavregy
      481 sahayprrfh fvdelpktps gktqryklke yeg
//
LOCUS       WP_257963462             434 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Brevibacterium ravenspurgense].
ACCESSION   WP_257963462
VERSION     WP_257963462.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium ravenspurgense
  ORGANISM  Brevibacterium ravenspurgense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Brevibacterium ravenspurgense"
                     /db_xref="taxon:479117"
     Protein         1..434
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44872
     Region          18..390
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(24..25,28..29,32,64,114..115,117..119,122,142,
                     145..146,149,222,225..226,229..231,234,264,268,316..317,
                     321,325,341,344..345,348..349,352)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340883"
ORIGIN      
        1 mpavsaarvp rrgflialaa tifvmvaasa pslfypqiad rlgltpvatt lifavyaftl
       61 lavllclgsv sdrvgrravv tagsvllsls limfwfagsl tvfiaaralq gvaagllipt
      121 lsammidfep etrpdsaalw ntigpmlglg tgtlsaavli dltsdpsavv fgilaaffai
      181 mgfavwttpe rvtrtaitla dlrpqfhvpa rlrqafiagv paiiagwatn glflalgagl
      241 vrnelggath ahagvalfvf aiagvltsra lyrrpariis isatgaltlg taaslgalal
      301 hsypayvisl aavgsgfgta flgvlrtimp ltaaseraav msvvytvsyl afgvptiiag
      361 llvplltlsg tmillggvvv llsaaatilr lrvrdqggpe tnpagqsseh rraeaprgkq
      421 hptdpditae rrkp
//
LOCUS       WP_257963486             213 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Carnobacterium maltaromaticum].
ACCESSION   WP_257963486
VERSION     WP_257963486.1
KEYWORDS    RefSeq.
SOURCE      Carnobacterium maltaromaticum
  ORGANISM  Carnobacterium maltaromaticum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Carnobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Carnobacterium maltaromaticum"
                     /db_xref="taxon:2751"
     Protein         1..213
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=23721
     Region          15..>180
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mtrkqsdqvn rknnlmiatl flgyimiyid klgvgvalvp iakefslttt qtgwimssff
       61 vgytlmqipm gllnnkigsr kilifsilfv aifmllfglg kgliyfmlir fltgaiahsg
      121 ypassgkeis lnlplskrtf aqgillassr iagivgpvmv spmietigwr kayfvmagla
      181 siimlillif lpkekrrrig ylliyrlkik fhc
//
LOCUS       WP_257963287             129 aa            linear   BCT 02-MAR-2025
DEFINITION  undecaprenyl phosphate translocase family protein [Aerococcus
            christensenii].
ACCESSION   WP_257963287
VERSION     WP_257963287.1
KEYWORDS    RefSeq.
SOURCE      Aerococcus christensenii
  ORGANISM  Aerococcus christensenii
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Aerococcaceae; Aerococcus.
REFERENCE   1  (residues 1 to 129)
  AUTHORS   Sit,B., Srisuknimit,V., Bueno,E., Zingl,F.G., Hullahalli,K.,
            Cava,F. and Waldor,M.K.
  TITLE     Undecaprenyl phosphate translocases confer conditional microbial
            fitness
  JOURNAL   Nature 613 (7945), 721-728 (2023)
   PUBMED   36450355
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015951.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04018.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Aerococcus christensenii"
                     /db_xref="taxon:87541"
     Protein         1..129
                     /product="undecaprenyl phosphate translocase family
                     protein"
                     /calculated_mol_wt=14386
     Region          <20..120
                     /region_name="DUF368"
                     /note="Domain of unknown function (DUF368); cl00893"
                     /db_xref="CDD:469978"
ORIGIN      
        1 mdfryyggiv srfddflren ltqvqpnfmv wlgsgaligl gvivpemsps nfliyfglye
       61 kmssdishln matviplvig ailcvlvlak lanylfrcyy agmyhfilet vlgsflsyfp
      121 nggsscfyt
//
LOCUS       WP_257963323             275 aa            linear   BCT 02-MAR-2025
DEFINITION  portal protein [Klebsiella pneumoniae].
ACCESSION   WP_257963323
VERSION     WP_257963323.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 275)
  AUTHORS   Nakasu,S., Fujisawa,H. and Minagawa,T.
  TITLE     Purification of characterization of gene 8 product of bacteriophage
            T3
  JOURNAL   Virology 143 (2), 422-434 (1985)
   PUBMED   3904172
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023657.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12236.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..275
                     /product="portal protein"
                     /calculated_mol_wt=29388
     Region          <1..227
                     /region_name="Head-tail_con"
                     /note="Bacteriophage head to tail connecting protein;
                     cl19541"
                     /db_xref="CDD:450324"
ORIGIN      
        1 mvvlpdikll neinraiieg aqmavrppml lpedgilqpf kmmpgalnfg gmnrdgkpla
       61 lplntatdfs vamtlaeqkr qtindgffit lfqilvdnpq mtateamlra qekgqllapt
      121 agriqaeflg tlilreidia yqngllpepp eqlkeiggey dieytsplvr lqmseeasgi
      181 mnvvnaagti gqfdqniart lngdaalrfi akasgaplqv vkteaemaaq daadqqqlql
      241 qqllaaapva ataakdfaqa nqiaqtpaps palqg
//
LOCUS       WP_257963543             478 aa            linear   BCT 02-MAR-2025
DEFINITION  oligosaccharide flippase family protein [Carnobacterium
            maltaromaticum].
ACCESSION   WP_257963543
VERSION     WP_257963543.1
KEYWORDS    RefSeq.
SOURCE      Carnobacterium maltaromaticum
  ORGANISM  Carnobacterium maltaromaticum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Carnobacterium.
REFERENCE   1  (residues 1 to 478)
  AUTHORS   Yao,Z. and Valvano,M.A.
  TITLE     Genetic analysis of the O-specific lipopolysaccharide biosynthesis
            region (rfb) of Escherichia coli K-12 W3110: identification of
            genes that confer group 6 specificity to Shigella flexneri
            serotypes Y and 4a
  JOURNAL   J Bacteriol 176 (13), 4133-4143 (1994)
   PUBMED   7517390
REFERENCE   2  (residues 1 to 478)
  AUTHORS   Becker,A., Kleickmann,A., Kuster,H., Keller,M., Arnold,W. and
            Puhler,A.
  TITLE     Analysis of the Rhizobium meliloti genes exoU, exoV, exoW, exoT,
            and exoI involved in exopolysaccharide biosynthesis and nodule
            invasion: exoU and exoW probably encode glucosyltransferases
  JOURNAL   Mol Plant Microbe Interact 6 (6), 735-744 (1993)
   PUBMED   8118055
REFERENCE   3  (residues 1 to 478)
  AUTHORS   Popham,D.L. and Stragier,P.
  TITLE     Cloning, characterization, and expression of the spoVB gene of
            Bacillus subtilis
  JOURNAL   J Bacteriol 173 (24), 7942-7949 (1991)
   PUBMED   1744050
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014051.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01943.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Carnobacterium maltaromaticum"
                     /db_xref="taxon:2751"
     Protein         1..478
                     /product="oligosaccharide flippase family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=53195
     Region          16..408
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 menienksgi knvlynvvyl fcgnivtkll gavatmifir ysgatnygil sialafsaiv
       61 vfftdagisq ttiregtkkn adlstimysy trvrlflfli vtlasivfvl vvynddpgkk
      121 yailaltipa lfgglmqsig mtyfqiierm kkvlfinvva svgtslalfl gvyfnfsiiv
      181 lcfsyglasv fsgiyaiflv kkeikltkkm dskifdqlli faingvivml ipqigplild
      241 rvltvkevgy yaaafkipsv lyqfpgviat afyprlfqlg nekkykehra msgfelkims
      301 ilgallalpf vvapkfwivs llkeemlpav palvllsyli llqsmkypla dylttvgrqk
      361 grtivmfvgl iisivlylvl ghlygltgga mapviaelvi iigsillipk gisfffknnf
      421 vivtsfilci fmykylfsel hpligitiie clyillvvvf qkdirekiks fvevklkl
//
LOCUS       WP_257963569              90 aa            linear   BCT 02-MAR-2025
DEFINITION  divalent metal cation transporter [Carnobacterium maltaromaticum].
ACCESSION   WP_257963569
VERSION     WP_257963569.1
KEYWORDS    RefSeq.
SOURCE      Carnobacterium maltaromaticum
  ORGANISM  Carnobacterium maltaromaticum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Carnobacterium.
REFERENCE   1  (residues 1 to 90)
  AUTHORS   Bozzi,A.T., Zimanyi,C.M., Nicoludis,J.M., Lee,B.K., Zhang,C.H. and
            Gaudet,R.
  TITLE     Structures in multiple conformations reveal distinct transition
            metal and proton pathways in an Nramp transporter
  JOURNAL   Elife 8, e41124 (2019)
   PUBMED   30714568
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 90)
  AUTHORS   Ehrnstorfer,I.A., Geertsma,E.R., Pardon,E., Steyaert,J. and
            Dutzler,R.
  TITLE     Crystal structure of a SLC11 (NRAMP) transporter reveals the basis
            for transition-metal ion transport
  JOURNAL   Nat Struct Mol Biol 21 (11), 990-996 (2014)
   PUBMED   25326704
REFERENCE   3  (residues 1 to 90)
  AUTHORS   Shin,J.H., Wakeman,C.A., Goodson,J.R., Rodionov,D.A.,
            Freedman,B.G., Senger,R.S. and Winkler,W.C.
  TITLE     Transport of magnesium by a bacterial Nramp-related gene
  JOURNAL   PLoS Genet 10 (6), e1004429 (2014)
   PUBMED   24968120
  REMARK    Publication Status: Online-Only
REFERENCE   4  (residues 1 to 90)
  AUTHORS   Govoni,G. and Gros,P.
  TITLE     Macrophage NRAMP1 and its role in resistance to microbial
            infections
  JOURNAL   Inflamm Res 47 (7), 277-284 (1998)
   PUBMED   9719491
REFERENCE   5  (residues 1 to 90)
  AUTHORS   Agranoff,D.D. and Krishna,S.
  TITLE     Metal ion homeostasis and intracellular parasitism
  JOURNAL   Mol Microbiol 28 (3), 403-412 (1998)
   PUBMED   9632246
REFERENCE   6  (residues 1 to 90)
  AUTHORS   Pinner,E., Gruenheid,S., Raymond,M. and Gros,P.
  TITLE     Functional complementation of the yeast divalent cation transporter
            family SMF by NRAMP2, a member of the mammalian natural
            resistance-associated macrophage protein family
  JOURNAL   J Biol Chem 272 (46), 28933-28938 (1997)
   PUBMED   9360964
REFERENCE   7  (residues 1 to 90)
  AUTHORS   Cellier,M., Belouchi,A. and Gros,P.
  TITLE     Resistance to intracellular infections: comparative genomic
            analysis of Nramp
  JOURNAL   Trends Genet 12 (6), 201-204 (1996)
   PUBMED   8928221
REFERENCE   8  (residues 1 to 90)
  AUTHORS   Cellier,M., Prive,G., Belouchi,A., Kwan,T., Rodrigues,V., Chia,W.
            and Gros,P.
  TITLE     Nramp defines a family of membrane proteins
  JOURNAL   Proc Natl Acad Sci U S A 92 (22), 10089-10093 (1995)
   PUBMED   7479731
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013715.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01566.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Carnobacterium maltaromaticum"
                     /db_xref="taxon:2751"
     Protein         1..90
                     /product="divalent metal cation transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=9751
     Region          <1..79
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
ORIGIN      
        1 miavvpvfic twllgeggta qlllwsqvil slqlpfavvp lvlytsdkkk mgefvnppwi
       61 kilawiatvv iialnvflvg yilitgqdlg
//
LOCUS       WP_257963624             345 aa            linear   BCT 02-MAR-2025
DEFINITION  replication initiation factor domain-containing protein
            [Carnobacterium maltaromaticum].
ACCESSION   WP_257963624
VERSION     WP_257963624.1
KEYWORDS    RefSeq.
SOURCE      Carnobacterium maltaromaticum
  ORGANISM  Carnobacterium maltaromaticum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Carnobacterium.
REFERENCE   1  (residues 1 to 345)
  AUTHORS   Li,A.H., Silvestrini,B., Leone,M.G., Giacomelli,S. and Cheng,C.Y.
  TITLE     Cerebrin-50, a human cerebrospinal fluid protein whose mRNA is
            present in multiple tissues but predominantly expressed in the
            lymphoblastoid cells and the brain
  JOURNAL   Biochem Mol Biol Int 35 (1), 135-144 (1995)
   PUBMED   7735128
REFERENCE   2  (residues 1 to 345)
  AUTHORS   Balson,D.F. and Shaw,W.V.
  TITLE     Nucleotide sequence of the rep gene of staphylococcal plasmid pCW7
  JOURNAL   Plasmid 24 (1), 74-80 (1990)
   PUBMED   2270231
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014537.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02486.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Carnobacterium maltaromaticum"
                     /db_xref="taxon:2751"
     Protein         1..345
                     /product="replication initiation factor domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /calculated_mol_wt=39911
     Region          13..96
                     /region_name="Rol_Rep_N"
                     /note="Rolling Circle replication initiation protein
                     N-terminal domain; pfam18106"
                     /db_xref="CDD:465652"
     Region          123..>279
                     /region_name="Rep_trans"
                     /note="Replication initiation factor; pfam02486"
                     /db_xref="CDD:426796"
ORIGIN      
        1 mkdvtmtenv lgkidwlqiv cqniywedlf sqllqisldc vseqlsylkh eeydvvyscg
       61 tikyytyhda eqsyqrgtli msgqactmye wallasdtsi lafqtlawrf hqqslntdft
      121 fevkrmdlal ddynqtpffs ldlivgkvkr kqflskgrtt klidsefdkq traktqqiga
      181 ggseclfrfy ekakeltkgl sgeeaenlfe qaptvrleae trhntanqlf gtlayltkeq
      241 eltnlirgfi qteltfyees sfdstlnwyq yqgglavtqa iyflvnhglp iqpkligkke
      301 hcvwsselae klidfvtqhq rmdlipliqn ktknrsikkm erspk
//
LOCUS       WP_257963702              86 aa            linear   BCT 02-MAR-2025
DEFINITION  HTH domain-containing protein [Carnobacterium maltaromaticum].
ACCESSION   WP_257963702
VERSION     WP_257963702.1
KEYWORDS    RefSeq.
SOURCE      Carnobacterium maltaromaticum
  ORGANISM  Carnobacterium maltaromaticum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Carnobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08279.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Carnobacterium maltaromaticum"
                     /db_xref="taxon:2751"
     Protein         1..86
                     /product="HTH domain-containing protein"
                     /calculated_mol_wt=10116
     Region          12..>56
                     /region_name="YobV"
                     /note="Predicted DNA-binding transcriptional regulator
                     YobV, contains HTH and WYL domains [Transcription];
                     COG2378"
                     /db_xref="CDD:441945"
ORIGIN      
        1 mestqlqlli dkrnirwfqi lsklehshki stkelfhllg istrtiisdv keikqyfnht
       61 itivsskkgy tfklinklay ierkkn
//
LOCUS       WP_257963633             129 aa            linear   BCT 02-MAR-2025
DEFINITION  PLP-dependent transferase [Carnobacterium maltaromaticum].
ACCESSION   WP_257963633
VERSION     WP_257963633.1
KEYWORDS    RefSeq.
SOURCE      Carnobacterium maltaromaticum
  ORGANISM  Carnobacterium maltaromaticum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Carnobacterium.
REFERENCE   1  (residues 1 to 129)
  AUTHORS   Clausen,T., Huber,R., Prade,L., Wahl,M.C. and Messerschmidt,A.
  TITLE     Crystal structure of Escherichia coli cystathionine gamma-synthase
            at 1.5 A resolution
  JOURNAL   EMBO J 17 (23), 6827-6838 (1998)
   PUBMED   9843488
REFERENCE   2  (residues 1 to 129)
  AUTHORS   Clausen,T., Huber,R., Laber,B., Pohlenz,H.D. and Messerschmidt,A.
  TITLE     Crystal structure of the pyridoxal-5'-phosphate dependent
            cystathionine beta-lyase from Escherichia coli at 1.83 A
  JOURNAL   J Mol Biol 262 (2), 202-224 (1996)
   PUBMED   8831789
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013237.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01053.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Carnobacterium maltaromaticum"
                     /db_xref="taxon:2751"
     Protein         1..129
                     /product="PLP-dependent transferase"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0019346 - transsulfuration [Evidence IEA]"
                     /calculated_mol_wt=14106
     Region          <6..127
                     /region_name="MetC"
                     /note="Cystathionine beta-lyase/cystathionine
                     gamma-synthase [Amino acid transport and metabolism];
                     COG0626"
                     /db_xref="CDD:440391"
ORIGIN      
        1 mvytvkiltf lkeheaiarl nypgsaspee aaiqkkqtrg ngsvfsielt eeydplkfve
       61 eldlfdlavs lggveslvch pstmthesya ielqekigis agllrfaigi ehvddlmndl
      121 aqaldlakk
//
LOCUS       WP_257963706             336 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma 54-interacting transcriptional regulator [Carnobacterium
            maltaromaticum].
ACCESSION   WP_257963706
VERSION     WP_257963706.1
KEYWORDS    RefSeq.
SOURCE      Carnobacterium maltaromaticum
  ORGANISM  Carnobacterium maltaromaticum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Carnobacterium.
REFERENCE   1  (residues 1 to 336)
  AUTHORS   Studholme,D.J. and Dixon,R.
  TITLE     Domain architectures of sigma54-dependent transcriptional
            activators
  JOURNAL   J Bacteriol 185 (6), 1757-1767 (2003)
   PUBMED   12618438
REFERENCE   2  (residues 1 to 336)
  AUTHORS   Chaney,M., Grande,R., Wigneshweraraj,S.R., Cannon,W., Casaz,P.,
            Gallegos,M.T., Schumacher,J., Jones,S., Elderkin,S., Dago,A.E.,
            Morett,E. and Buck,M.
  TITLE     Binding of transcriptional activators to sigma 54 in the presence
            of the transition state analog ADP-aluminum fluoride: insights into
            activator mechanochemical action
  JOURNAL   Genes Dev 15 (17), 2282-2294 (2001)
   PUBMED   11544185
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00158.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Carnobacterium maltaromaticum"
                     /db_xref="taxon:2751"
     Protein         1..336
                     /product="sigma 54-interacting transcriptional regulator"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008134 - transcription factor binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=37576
     Region          1..>335
                     /region_name="PspF"
                     /note="Transcriptional regulators containing an AAA-type
                     ATPase domain and a DNA-binding domain [Transcription,
                     Signal transduction mechanisms]; COG1221"
                     /db_xref="CDD:440834"
ORIGIN      
        1 mrrielilqe leksagntgl stqeiaeslg ltranvssdl nqlvaegrat keigkpvlyf
       61 plvkvaqlek fsfdnpslqm mieqaraail yppkglnmlf ygetgvgksm fanliyeyac
      121 svkkttkhyp fihfncsdya nnpqllmgql fgvaknaytg ateekkslie eanggmlfld
      181 eihrlppegq emfftfidrg lyrrlgesns ersaevqila atteapesal lktfqrripm
      241 vikipnller tieeraslit lffnqeadrl gipikvsqns mrallsyncp nnigqlkndi
      301 qlacakvyad fivahkkeli ihspelpphv lnglyl
//
LOCUS       WP_257963709             649 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase [Carnobacterium maltaromaticum].
ACCESSION   WP_257963709
VERSION     WP_257963709.1
KEYWORDS    RefSeq.
SOURCE      Carnobacterium maltaromaticum
  ORGANISM  Carnobacterium maltaromaticum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Carnobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Carnobacterium maltaromaticum"
                     /db_xref="taxon:2751"
     Protein         1..649
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=69591
     Region          202..648
                     /region_name="Peptidases_S8_C5a_Peptidase"
                     /note="Peptidase S8 family domain in Streptococcal C5a
                     peptidases; cd07475"
                     /db_xref="CDD:173801"
     Site            order(220,285,352..354,386,630)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:173801"
     Site            order(220,285,630)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173801"
     Region          479..597
                     /region_name="PA_C5a_like"
                     /note="Protease-associated domain containing proteins like
                     Streptococcus pyogenes C5a peptidase. This group contains
                     various PA domain-containing proteins similar to S.
                     pyogenes C5a, including, i) Vpr, a minor extracellular
                     serine protease from Bacillus...; cd02133"
                     /db_xref="CDD:239048"
     Site            506..508
                     /site_type="active"
                     /note="putative integrin binding motif [active]"
                     /db_xref="CDD:239048"
ORIGIN      
        1 mmkkkkfqnl ikwiliytii ggvgsqfspi issaiesenl ssdnytklvk alesneqsvn
       61 alnektfden iaaqleirgl kfedfsntek neqeirvviq llnesasdss qpptgtkksi
      121 ekieqatddv iqsqqiiktr vekitgnkaq rsfgyllngf sidvkykdie tirdlpgvad
      181 vtvatvyypt sveanqlani nqvweeyqlk gegmvvsiid tgidpthrdl rlsdttkeki
      241 tleesqinit emghgkaftr kipygynyad nnttiidenp ttnmhgmhva giaaangiga
      301 dsttavlgva peaqllamkv fsnssgaval nddviaaied svklgadiln mslgsvagnr
      361 dsndpvqisi reaaevgvls viaagnsgls tsndtnvapq nkfgtidtgt lgspgvtdeg
      421 ltvaslessv qisgrlaiyt vnetgakvpy lmetpasseg kipyfkgvta nstglstphp
      481 iidlgtgtea dyqnkdvtgk ivlvrrgsip fldkqvlakk ygaaaifiyn nlpnlaalem
      541 piadpnfiti gltkedgdkf aelisenpam nysfeadkfl tenpkagkis dfsswgptps
      601 lefkpeitap ggqiystanq nsyqtnsgts maapfvagte aliyqalka
//
LOCUS       WP_257963724             339 aa            linear   BCT 02-MAR-2025
DEFINITION  Cna B-type domain-containing protein [Carnobacterium
            maltaromaticum].
ACCESSION   WP_257963724
VERSION     WP_257963724.1
KEYWORDS    RefSeq.
SOURCE      Carnobacterium maltaromaticum
  ORGANISM  Carnobacterium maltaromaticum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Carnobacterium.
REFERENCE   1  (residues 1 to 339)
  AUTHORS   Deivanayagam,C.C., Rich,R.L., Carson,M., Owens,R.T., Danthuluri,S.,
            Bice,T., Hook,M. and Narayana,S.V.
  TITLE     Novel fold and assembly of the repetitive B region of the
            Staphylococcus aureus collagen-binding surface protein
  JOURNAL   Structure 8 (1), 67-78 (2000)
   PUBMED   10673425
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017548.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05738.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Carnobacterium maltaromaticum"
                     /db_xref="taxon:2751"
     Protein         1..339
                     /product="Cna B-type domain-containing protein"
                     /calculated_mol_wt=37166
     Region          <68..>191
                     /region_name="ClfA"
                     /note="Clumping factor A-related surface protein, MSCRAMM
                     (microbial surface components recognizing adhesive matrix
                     molecules) family, DEv-IgG fold [Cell
                     wall/membrane/envelope biogenesis]; COG4932"
                     /db_xref="CDD:443959"
     Region          187..272
                     /region_name="Cna_B"
                     /note="Cna protein B-type domain; pfam05738"
                     /db_xref="CDD:461726"
     Region          309..337
                     /region_name="LPXTG_anchor"
                     /note="LPXTG-motif cell wall anchor domain; TIGR01167"
                     /db_xref="CDD:273478"
ORIGIN      
        1 mvpnslrdvt dafsnkitms ngnkgfsigl gninrpylit ydgiighipa qresfdnkav
       61 itaneiettt seknfvysde ggsaagntyq inlikqdken atllngaefd virvstnrkv
      121 gtiatvngeg qikgllqdsy qlietkapvg ytldptpilv tpadfkesns llvatitaan
      181 ekekteisgi kmwddfnnky ntrpesitvi llkngqmfek nevkaddqgk wefnftnfpk
      241 sdtngvayty tldevevaky kksidnttit ntltelpekp vipvvpeeps rpelpskpva
      301 pqaktesfpk tgeeetvfam lvgllfvaga afsfikkln
//
LOCUS       WP_257963730             633 aa            linear   BCT 02-MAR-2025
DEFINITION  adhesive domain-containing protein [Carnobacterium maltaromaticum].
ACCESSION   WP_257963730
VERSION     WP_257963730.1
KEYWORDS    RefSeq.
SOURCE      Carnobacterium maltaromaticum
  ORGANISM  Carnobacterium maltaromaticum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Carnobacterium.
REFERENCE   1  (residues 1 to 633)
  AUTHORS   Creti,R., Fabretti,F., Koch,S., Huebner,J., Garsin,D.A.,
            Baldassarri,L., Montanaro,L. and Arciola,C.R.
  TITLE     Surface protein EF3314 contributes to virulence properties of
            Enterococcus faecalis
  JOURNAL   Int J Artif Organs 32 (9), 611-620 (2009)
   PUBMED   19856273
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042848.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20609.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Carnobacterium maltaromaticum"
                     /db_xref="taxon:2751"
     Protein         1..633
                     /product="adhesive domain-containing protein"
                     /calculated_mol_wt=64124
     Region          <3..214
                     /region_name="pAdhesive_17"
                     /note="Putative adhesive domain (group 17); pfam20609"
                     /db_xref="CDD:466758"
     Region          <364..>438
                     /region_name="SpoT"
                     /note="(p)ppGpp synthase/hydrolase, HD superfamily [Signal
                     transduction mechanisms, Transcription]; COG0317"
                     /db_xref="CDD:440086"
ORIGIN      
        1 mfqklegkvv ggatididak llpitpgdlp avsvligavd talntlkaaa tplgvdltsl
       61 ttafgairna qdlgsyqasl pgvvsadgks isvdftdglg lfvrqafvdt fqplrdavnq
      121 lsfpfpasit lnpllaalkl alnpvfnlvd tlvedssgll tnflsvnlla gtsydvkfav
      181 skpdaaqati haaavknpii dasllgains eganatlifa npiwdnyvip vpsvnqvyvg
      241 daaitgtval tnpippgstf eaivtladgs tvtapvnavd gsfsidvsgk tltandvlst
      301 iiqgtnsgvp kdslstettv lavpnpewda yvvkeptisp vhvgdtnvtg tvtlntpipa
      361 gttftavvtl pdgskvnapv gvdgvitvpl ngyvlqtgdt lstiiqatnn gatkdstptv
      421 stvlpavnte wenyvvtppv isdvtvgdtn vtgtvslatp ipagttfeai vtlpngsqvt
      481 apvgidgvit vplngyvlaa ddvlntiiqa tnagetkdsa nvattvkavt wgtyavaaps
      541 lqpifttata ingtvtlatp iplgatfeai atlpngstvs vpvngdgsfs lplggvqlaa
      601 geqvsvivqg tlngetrdsq iitatvqavs npe
//
LOCUS       WP_257963933             649 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Corynebacterium riegelii].
ACCESSION   WP_257963933
VERSION     WP_257963933.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium riegelii
  ORGANISM  Corynebacterium riegelii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (residues 1 to 649)
  AUTHORS   Zhang,Y.L., Arakawa,E. and Leung,K.Y.
  TITLE     Novel Aeromonas hydrophila PPD134/91 genes involved in O-antigen
            and capsule biosynthesis
  JOURNAL   Infect Immun 70 (5), 2326-2335 (2002)
   PUBMED   11953367
  REMARK    Erratum:[Infect Immun 2002 Jun;70(6):3308]
REFERENCE   2  (residues 1 to 649)
  AUTHORS   Swartley,J.S., Liu,L.J., Miller,Y.K., Martin,L.E., Edupuganti,S.
            and Stephens,D.S.
  TITLE     Characterization of the gene cassette required for biosynthesis of
            the (alpha1-->6)-linked N-acetyl-D-mannosamine-1-phosphate capsule
            of serogroup A Neisseria meningitidis
  JOURNAL   J Bacteriol 180 (6), 1533-1539 (1998)
   PUBMED   9515923
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025025.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13641.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Corynebacterium riegelii"
                     /db_xref="taxon:156976"
     Protein         1..649
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=73321
     Region          12..150
                     /region_name="Glft2_N"
                     /note="Galactofuranosyltransferase 2 N-terminal;
                     pfam17994"
                     /db_xref="CDD:436195"
     Region          168..436
                     /region_name="Glyco_tranf_2_3"
                     /note="Glycosyltransferase like family 2; pfam13641"
                     /db_xref="CDD:433372"
     Region          451..648
                     /region_name="GlfT2_domain3"
                     /note="Galactofuranosyltransferase-2, domain 3; pfam19320"
                     /db_xref="CDD:437152"
ORIGIN      
        1 metsknlavd tlarvlmpkk gephdvrmly lieqeqnkqr ltwsdrtsfs ipagnevsfq
       61 tyfnafpasy wrrwsqldtv vlamevegra tvsvyrskyd gtrisvtnvd atgyteiplk
      121 lsnfedggwl wfditaeedt risdaawcsp qapqeqllad gtvvppqpkq vavgiptfnr
      181 prdavnalha lgedsyveas ishvlmpdqg nqhpadepdf neaeaklegk lqifqqgnlg
      241 gsggysrimy ealnstdapf ilymdddiai epdsivravq aaryakspil vggqmlnlqd
      301 rsqlrttget vdpnifmfsa akhavydhdf akyplgyvgt deedldpkkt tsrplhrrid
      361 vdyngwwmnl fprvvaekmg lplplfikwd dneyalrake agfptvtwpg vaiwhmawad
      421 kddaidwqay fhmrnrliva siygpdnpea mlknmqksta khyfcmeyst iaiqneamrd
      481 flkgpdqlfd ilesslpriq eirkeysdaq vlpsatelpa ptgapgvptn klggrlakvk
      541 kipwaakall hlrkdedrsh wdapqlnlta eearwytlar ldsatvstag gtgvafrkrn
      601 kkladqlvee qkqlraeike rwaelkrtyr darpelsshe nwgkifdaq
//
LOCUS       WP_257963940             153 aa            linear   BCT 02-MAR-2025
DEFINITION  MauE/DoxX family redox-associated membrane protein [Corynebacterium
            riegelii].
ACCESSION   WP_257963940
VERSION     WP_257963940.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium riegelii
  ORGANISM  Corynebacterium riegelii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   van der Palen,C.J., Reijnders,W.N., de Vries,S., Duine,J.A. and van
            Spanning,R.J.
  TITLE     MauE and MauD proteins are essential in methylamine metabolism of
            Paracoccus denitrificans
  JOURNAL   Antonie Van Leeuwenhoek 72 (3), 219-228 (1997)
   PUBMED   9403107
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018942.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07291.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Corynebacterium riegelii"
                     /db_xref="taxon:156976"
     Protein         1..153
                     /product="MauE/DoxX family redox-associated membrane
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0030416 - methylamine metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=16729
ORIGIN      
        1 msvgvdkqka ldvlaalarf glaamwiqag vikignhmqv tqsieayeif tpywsnllah
       61 vigplelagg lflllgikir aagwvsmavl vmfviglwtv hargmvidcg cftpgerrpq
      121 pedvlwaiar digfmiatsl miyrpfkkla iyp
//
LOCUS       WP_257963956             346 aa            linear   BCT 02-MAR-2025
DEFINITION  ThiF family adenylyltransferase [Corynebacterium riegelii].
ACCESSION   WP_257963956
VERSION     WP_257963956.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium riegelii
  ORGANISM  Corynebacterium riegelii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (residues 1 to 346)
  AUTHORS   Lee,I. and Schindelin,H.
  TITLE     Structural insights into E1-catalyzed ubiquitin activation and
            transfer to conjugating enzymes
  JOURNAL   Cell 134 (2), 268-278 (2008)
   PUBMED   18662542
REFERENCE   2  (residues 1 to 346)
  AUTHORS   Lois,L.M. and Lima,C.D.
  TITLE     Structures of the SUMO E1 provide mechanistic insights into SUMO
            activation and E2 recruitment to E1
  JOURNAL   EMBO J 24 (3), 439-451 (2005)
   PUBMED   15660128
REFERENCE   3  (residues 1 to 346)
  AUTHORS   Lake,M.W., Wuebbens,M.M., Rajagopalan,K.V. and Schindelin,H.
  TITLE     Mechanism of ubiquitin activation revealed by the structure of a
            bacterial MoeB-MoaD complex
  JOURNAL   Nature 414 (6861), 325-329 (2001)
   PUBMED   11713534
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013094.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00899.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Corynebacterium riegelii"
                     /db_xref="taxon:156976"
     Protein         1..346
                     /product="ThiF family adenylyltransferase"
                     /GO_function="GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /calculated_mol_wt=35524
     Region          12..346
                     /region_name="PRK05597"
                     /note="molybdopterin biosynthesis protein MoeB; Validated"
                     /db_xref="CDD:235526"
ORIGIN      
        1 maprtglalm dryarqvsli gseaqarirg arigvigagg lgspallyla gagvgsilli
       61 dadvtsttnl hrqivhsget vgvpkvesaa arlkalnpdt qvdavnhrlt wsndgadava
      121 llegcdvvld gsdnfatrhv vshacarlgi phvwgsilgf eaqlsvfwag rgpvyedlfp
      181 appptgsvps caqagvlgpl vgvvgsamaa ealkivtglg nplvgqlgyf dmlagtweyi
      241 alvsdpkvtd qvrtgtpptg paevetiaeg atiidvrepv efaafrlpga invplgqime
      301 getpdeleng gvivcasgvr sseavailea rgltglaslr ggmerf
//
LOCUS       WP_257963974              72 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4411 family protein [Corynebacterium riegelii].
ACCESSION   WP_257963974
VERSION     WP_257963974.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium riegelii
  ORGANISM  Corynebacterium riegelii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025725.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14367.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Corynebacterium riegelii"
                     /db_xref="taxon:156976"
     Protein         1..72
                     /product="DUF4411 family protein"
                     /calculated_mol_wt=8406
     Region          5..>49
                     /region_name="PIN_SF"
                     /note="PIN (PilT N terminus) domain: Superfamily; cl28905"
                     /db_xref="CDD:475124"
ORIGIN      
        1 mylvdtnflg hlehyypgtv fpslwlqleq klftphvcfh qevdkelqrw shpglagitp
       61 tsrrtrfytl ts
//
LOCUS       WP_257963992            1264 aa            linear   BCT 02-MAR-2025
DEFINITION  tape measure protein, partial [Lactococcus lactis].
ACCESSION   WP_257963992
VERSION     WP_257963992.1
KEYWORDS    RefSeq.
SOURCE      Lactococcus lactis
  ORGANISM  Lactococcus lactis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Lactococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040129.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20155.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..1264
                     /organism="Lactococcus lactis"
                     /db_xref="taxon:1358"
     Protein         1..>1264
                     /product="tape measure protein"
     Region          89..772
                     /region_name="COG5283"
                     /note="Phage-related tail protein [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:444094"
     Region          837..1150
                     /region_name="SLT"
                     /note="SLT domain protein [Mobilome: prophages,
                     transposons]; COG3953"
                     /db_xref="CDD:443153"
     Region          1064..1177
                     /region_name="LT_TF-like"
                     /note="lytic transglycosylase-like domain of tail
                     fiber-like proteins and similar domains; cd13402"
                     /db_xref="CDD:381605"
     Site            order(1074,1102..1104,1107,1132,1150..1151)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:381605"
ORIGIN      
        1 makekvagtl atnigvnttn avtsieslkn svkdstnawk qmesqmklsg dtlgaskaky
       61 eglsdslskq ksvlerlkqe qsevnrstsa gekayqkyas qitqaevklt alngqqdkak
      121 qayeyqksgl aklneevqhs nklteervkq leaegkteea nkakidglks aqekysqilk
      181 iqkteleklg esgdknskay rlqevrvaqm stkvseatrd ikrlngteik prtegigkvk
      241 sqlrslngll drthshfkdv flgnilatgv igaigdiksk ftgaleagve ynkemqnlsv
      301 slnnftngnq klndslvdni knlreesgys idtlslltkk tygltgsadg akklsdafvn
      361 lgratgksdd amqniitkft qmnasgeits gsitkmektl pgfaktlatt mgvsrdklne
      421 lanngkisms dlsktienms aakpkgleny ltsfdgfsgh lkekyqslsg kitegffktn
      481 nnflknisks ldgeetekaf thigdsanka vttistafss vfkgtknpla dfanglanei
      541 eklgnfiskh andiknffgm vkelgsaafk ligdtlktvi pwlekfgtwa skhpkdvkki
      601 alaiiglnva lkgtlgvlkg vekyealkkl fvikdaekgt kaltglgkaa vgagkgmkla
      661 fnflktnpfi liitgivavv aafvelykhn kkfrkfingi akavskwags vvkwfkktwd
      721 gvskgfnnfg ksfskvfnsl lngiknawng awswignvfn kyidifksvl klftdfftgk
      781 wgnlgkdiqk iwnalwgfve sifgkkvdsi kkgiegfgtk iwdtfntikt kvsdfwkgmw
      841 dgliqfgkdg insvigvinn giggingvih tfggsknais kipklangtk gapkgvalin
      901 dapgehyqea vidnsgqmhv legrnrlvnf qggetvvpah aiphfengtp dwlssigswv
      961 kdkwdgltem ikhpiktlth fmtnaisgis gsplvtsiap algngfvnai vdpikkllgs
     1021 lkkkheddgg gsqgspsgsg vqrwagqvkq alaanglsts qdmidrvlrq iasessgnek
     1081 avqgnigdin nitgdlakgl mqtisstfna nkfpghgdif ngydnllaal nyakkkygps
     1141 lsflgnghgy enggiinahg fyeigegnkp emviplsvek naranqllae anqringnnr
     1201 assntadlsp vltllsnifn siedvkknpl iayalldgrn vsqglapymn qaltdyvnqq
     1261 drlw
//
LOCUS       WP_257964002              63 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleotidyltransferase family protein [Lactococcus lactis].
ACCESSION   WP_257964002
VERSION     WP_257964002.1
KEYWORDS    RefSeq.
SOURCE      Lactococcus lactis
  ORGANISM  Lactococcus lactis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Lactococcus.
REFERENCE   1  (residues 1 to 63)
  AUTHORS   Kuchta,K., Knizewski,L., Wyrwicz,L.S., Rychlewski,L. and
            Ginalski,K.
  TITLE     Comprehensive classification of nucleotidyltransferase fold
            proteins: identification of novel families and their
            representatives in human
  JOURNAL   Nucleic Acids Res 37 (22), 7701-7714 (2009)
   PUBMED   19833706
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017820.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06042.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..63
                     /organism="Lactococcus lactis"
                     /db_xref="taxon:1358"
     Protein         1..63
                     /product="nucleotidyltransferase family protein"
                     /calculated_mol_wt=6906
     Region          5..>42
                     /region_name="NTP_transf_6"
                     /note="Nucleotidyltransferase; cl01435"
                     /db_xref="CDD:470202"
ORIGIN      
        1 mfildevsvl nlpnyylaag svfqtvwnys dgnnlmtgih dixilctlik rflltallkm
       61 iks
//
LOCUS       WP_257964007             528 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein, partial [Lactococcus lactis].
ACCESSION   WP_257964007
VERSION     WP_257964007.1
KEYWORDS    RefSeq.
SOURCE      Lactococcus lactis
  ORGANISM  Lactococcus lactis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Lactococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018329.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06605.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Lactococcus lactis"
                     /db_xref="taxon:1358"
     Protein         <1..>528
                     /product="phage tail protein"
     Region          69..334
                     /region_name="Prophage_tail"
                     /note="Prophage endopeptidase tail; cl23994"
                     /db_xref="CDD:451647"
ORIGIN      
        1 ayisftydgi dhlfgvenvq esdyqitltc sslnlelrne qanalvntss hniqwyfdqm
       61 glianaqiti gtnevssltr tinydgqesk larlisvign fdaefefith lnddgtldsi
      121 ilniyrandg vniqgvgtnr ndvslnfgkn isgitrtgdt tnlfnattvt gsdnlkwnss
      181 efsyvnsdgv eefykrkndd tafaplslnl fksqiksnng dkwirkdfqt eytnvndmwg
      241 ycvsqfkqfa yptvtyevla nsslvlesvg ndrplsigdt iniqddnfmd sdgnvgllls
      301 arvsemeisf snptlnkitf snfkkqqsea sadiqaivnq lvdaatpyig sisttngvqf
      361 kngtgsttls ahiykgsatt etiadsyews kdgtvvapaq titvdasgvv dkaaysfkat
      421 iagkvvasqs vtitnvndgt spinlvidss ngyqfknnii nttftailyq nnkeidsdgt
      481 kfsyiwsktn sdgtvdtawn lahqtsqksi titnsdvwqr atfdctae
//
LOCUS       WP_257963773             111 aa            linear   BCT 02-MAR-2025
DEFINITION  ECF-type sigma factor [Carnobacterium maltaromaticum].
ACCESSION   WP_257963773
VERSION     WP_257963773.1
KEYWORDS    RefSeq.
SOURCE      Carnobacterium maltaromaticum
  ORGANISM  Carnobacterium maltaromaticum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Carnobacterium.
REFERENCE   1  (residues 1 to 111)
  AUTHORS   Helmann,J.D.
  TITLE     The extracytoplasmic function (ECF) sigma factors
  JOURNAL   Adv Microb Physiol 46, 47-110 (2002)
   PUBMED   12073657
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019265.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07638.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Carnobacterium maltaromaticum"
                     /db_xref="taxon:2751"
     Protein         1..111
                     /product="ECF-type sigma factor"
                     /calculated_mol_wt=12958
     Region          <11..108
                     /region_name="PRK08295"
                     /note="RNA polymerase sporulation sigma factor SigH"
                     /db_xref="CDD:181361"
ORIGIN      
        1 mklqqfyfnl irrqnaikrk gnkflgslde vretssseny lyapqkdatp ealllarege
       61 hryyqllsly ekqvllahtk gyeieeiaty ydksiqsvkn alsrcrtkfn d
//
LOCUS       WP_257964055              37 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: IS3 family transposase [Bifidobacterium].
ACCESSION   WP_257964055
VERSION     WP_257964055.1
KEYWORDS    RefSeq.
SOURCE      Bifidobacterium
  ORGANISM  Bifidobacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024729.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13333.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..37
                     /organism="Bifidobacterium"
                     /db_xref="taxon:1678"
     Protein         1..37
                     /product="IS3 family transposase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=4349
     Region          <5..37
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 mlvlideyih wynherikqs lgwmspvqyr qsqgmaa
//
LOCUS       WP_257964172             497 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA reductase [Bacillus sp. UMB0728].
ACCESSION   WP_257964172
VERSION     WP_257964172.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. UMB0728
  ORGANISM  Bacillus sp. UMB0728
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 497)
  AUTHORS   Lee,C.Y. and Meighen,E.A.
  TITLE     Cysteine-286 as the site of acylation of the Lux-specific fatty
            acyl-CoA reductase
  JOURNAL   Biochim Biophys Acta 1338 (2), 215-222 (1997)
   PUBMED   9128139
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017686.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05893.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Bacillus sp. UMB0728"
                     /db_xref="taxon:2066052"
     Protein         1..497
                     /product="acyl-CoA reductase"
                     /GO_function="GO:0003995 - acyl-CoA dehydrogenase activity
                     [Evidence IEA]"
                     /GO_process="GO:0008218 - bioluminescence [Evidence IEA]"
                     /calculated_mol_wt=55956
     Region          50..479
                     /region_name="ALDH_Acyl-CoA-Red_LuxC"
                     /note="Acyl-CoA reductase LuxC; cd07080"
                     /db_xref="CDD:143399"
     Site            308
                     /site_type="active"
                     /note="putative catalytic cysteine [active]"
                     /db_xref="CDD:143399"
ORIGIN      
        1 mqptsfsqra agkmaetvdi fhlpssikpa vvkekiynae getfslrype lsgeemkyti
       61 eavlekrsqy lkdlpvssiv stideavrlw lnpdyhlrel aekllpavtg ydsemirlel
      121 krymrtfrkk ellrfleeef dspgmldefr prksgglsra ygpdlifhvf sgnvpgvqlw
      181 slimgflmks ahlgktsfse pvlpvlflks laeidenlae aaavlpwhgg nsemeapale
      241 saeavivygs dktvnsikkr lpegkrllay ghkisismig kealtpdlya rtarrlaedi
      301 ciydqqgcls lqsvyieegg tveprrfaql lgselaryek krrrsvlske ehlsiqrtrg
      361 kyeleklkgs rtavykdgmn tgwtvvfqeg sgfeasplnr fvhifsvqel egcignlqpy
      421 kkymqscgla vlpdrlmdis aklgeagisr icpvgemnra kpgwhhdgsf nllslarvid
      481 iernaeedme rydpdve
//
LOCUS       WP_257964173             451 aa            linear   BCT 02-MAR-2025
DEFINITION  solute carrier family 23 protein [Bacillus sp. UMB0728].
ACCESSION   WP_257964173
VERSION     WP_257964173.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. UMB0728
  ORGANISM  Bacillus sp. UMB0728
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 451)
  AUTHORS   Hogue,D.L. and Ling,V.
  TITLE     A human nucleobase transporter-like cDNA (SLC23A1): member of a
            transporter family conserved from bacteria to mammals
  JOURNAL   Genomics 59 (1), 18-23 (1999)
   PUBMED   10395795
REFERENCE   2  (residues 1 to 451)
  AUTHORS   Tsukaguchi,H., Tokui,T., Mackenzie,B., Berger,U.V., Chen,X.Z.,
            Wang,Y., Brubaker,R.F. and Hediger,M.A.
  TITLE     A family of mammalian Na+-dependent L-ascorbic acid transporters
  JOURNAL   Nature 399 (6731), 70-75 (1999)
   PUBMED   10331392
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013056.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00860.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Bacillus sp. UMB0728"
                     /db_xref="taxon:2066052"
     Protein         1..451
                     /product="solute carrier family 23 protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=46762
     Region          30..424
                     /region_name="Xan_ur_permease"
                     /note="Permease family; cl23746"
                     /db_xref="CDD:474042"
ORIGIN      
        1 mdekrtesst deiligleek lspgktvlyg lqhvfvsnvw ldpifvaami glpfalsanm
       61 vnsifiaagi vtfiqatklv rlpiiqgpsa afdaimisag kanglaaatg gilvsaaivf
      121 llsitgvlgr lralftpvis gtviflvgis lagftlhefl ggspgdegfa spstlllsit
      181 talivlglsl fgkglwksfs flialiagda lafslgkadf amikesawfg lpqllpyglt
      241 fewaafltff iaylvaviea mgvyqassam lkteltakri rggfagesag sfvsaliggf
      301 pttayaqnvg llrltgvgsr ypvmaaavif lvlglvpkag allaltpapv vggiflpaaa
      361 tlvftgisil akaeatqiny mivglsmlla islpsyavna sgiagtfltn siligaftsi
      421 flqlslvnlp nlfkkgaasd ekridqfdsg n
//
LOCUS       WP_257964175             288 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Bacillus sp. UMB0728].
ACCESSION   WP_257964175
VERSION     WP_257964175.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. UMB0728
  ORGANISM  Bacillus sp. UMB0728
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00528.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Bacillus sp. UMB0728"
                     /db_xref="taxon:2066052"
     Protein         1..288
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=32566
     Region          <52..244
                     /region_name="DppB"
                     /note="ABC-type dipeptide/oligopeptide/nickel transport
                     system, permease component [Amino acid transport and
                     metabolism, Inorganic ion transport and metabolism];
                     COG0601"
                     /db_xref="CDD:440366"
ORIGIN      
        1 matifrslts vvliiilavl plgfhngdak vvfsiipmid eirdfiqglk sgeswlylqg
       61 ererplledl ipywlssfly ltvsaviavi lsvlfgvflw ekggrllnav lgftgmlpdf
      121 ilvlllqllp vfvhketgik tvkvasssms epaiflpift lviiplfyll rslsershev
      181 kgedyilaak akglrkgsiy lfhvflnvlp flkadlhkil simlgnlfii eylyntrgit
      241 allfvqqiqf gyqynlvifs llsllllylv slytlklllw lierglqr
//
LOCUS       WP_257964211             168 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6241 domain-containing protein [Bacillus sp. UMB0728].
ACCESSION   WP_257964211
VERSION     WP_257964211.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. UMB0728
  ORGANISM  Bacillus sp. UMB0728
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040035.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19754.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Bacillus sp. UMB0728"
                     /db_xref="taxon:2066052"
     Protein         1..168
                     /product="DUF6241 domain-containing protein"
                     /calculated_mol_wt=18791
     Region          73..164
                     /region_name="DUF6241"
                     /note="Family of unknown function (DUF6241); pfam19754"
                     /db_xref="CDD:437586"
ORIGIN      
        1 mskkkksffh nklrlaglgl iilalagyaa ynytslgkge raaeersass kgekdlkklf
       61 pgnmeesavq qaihdmshqk vkaenkwgal qitpdrisrl iyvvganemn yqhsdlyldi
      121 lkrwsegdfs saardhnsiw klqggtvgea kgllsekeeq kyieknfk
//
LOCUS       WP_257964276             542 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Bacillus sp. UMB0728].
ACCESSION   WP_257964276
VERSION     WP_257964276.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. UMB0728
  ORGANISM  Bacillus sp. UMB0728
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Bacillus sp. UMB0728"
                     /db_xref="taxon:2066052"
     Protein         1..542
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=58777
     Region          48..439
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(74,124..125,127..129,132,154,157..158,286,289..290,
                     293..295,298,326,330,382..383,387,391,407,410..411,
                     414..415,418)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 msqpvnisgs dpkkmaippy laisiltifs igpqyflnls yilnqgiiqn glnlgsndll
       61 lpstlsnlaf afgvplgpvl arkiglkrny ltfvlvfllg svldalslgi ttltagriiq
      121 gisagilflt ilpvsltsfp nkirntfllm aigglfgssa vgaffgsisl ssgmwrwlfi
      181 lnivssilcl vmgsiflpsa qdekkhkepp adkkgifllg lfilslaypl cnlmeegfss
      241 iriwpllvla aiimllfiyi dlksenplvp fgslkaakpv sgtimavash islifalagi
      301 ngflrnnkdl pfeylshfyf wffigilita ilktllydrl gagilgtigs laviyvswrw
      361 mnitpdislh alyfqiaclg agvsmvlvag algtalagdi hkaskrsvtl hsirnfagav
      421 aapllgwfiy rqnayhyeav rihaskydpe vqaemarmtr hlmesglpla kaksmafyel
      481 vvnakksail tayhdlftim lgigvimlla sigkiatgkg rslvqkqkri llpapdsrqa
      541 hk
//
LOCUS       WP_257964343             444 aa            linear   BCT 02-MAR-2025
DEFINITION  class I SAM-dependent methyltransferase [Corynebacterium coyleae].
ACCESSION   WP_257964343
VERSION     WP_257964343.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium coyleae
  ORGANISM  Corynebacterium coyleae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (residues 1 to 444)
  AUTHORS   Glickman,M.S., Cox,J.S. and Jacobs,W.R. Jr.
  TITLE     A novel mycolic acid cyclopropane synthetase is required for
            cording, persistence, and virulence of Mycobacterium tuberculosis
  JOURNAL   Mol Cell 5 (4), 717-727 (2000)
   PUBMED   10882107
REFERENCE   2  (residues 1 to 444)
  AUTHORS   Yuan,Y. and Barry,C.E. 3rd.
  TITLE     A common mechanism for the biosynthesis of methoxy and cyclopropyl
            mycolic acids in Mycobacterium tuberculosis
  JOURNAL   Proc Natl Acad Sci U S A 93 (23), 12828-12833 (1996)
   PUBMED   8917504
REFERENCE   3  (residues 1 to 444)
  AUTHORS   George,K.M., Yuan,Y., Sherman,D.R. and Barry,C.E. 3rd.
  TITLE     The biosynthesis of cyclopropanated mycolic acids in Mycobacterium
            tuberculosis. Identification and functional analysis of CMAS-2
  JOURNAL   J Biol Chem 270 (45), 27292-27298 (1995)
   PUBMED   7592990
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014414.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02353.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Corynebacterium coyleae"
                     /db_xref="taxon:53374"
     Protein         1..444
                     /product="class I SAM-dependent methyltransferase"
                     /EC_number="2.1.1.-"
                     /calculated_mol_wt=47386
     Region          192..433
                     /region_name="CMAS"
                     /note="Mycolic acid cyclopropane synthetase; cl47167"
                     /db_xref="CDD:481507"
ORIGIN      
        1 madisrarks sidaaawpav aavprargga lrtkiaevtf aracakaela legdgaaltv
       61 esadmferia argwtglaes ymagewvtst seglvdalqa ligagyrpsp arvsapkhgr
      121 tplgvigelp pdlvqhfdgg tathaqghfg tgvpttqrtr mkshtpgagr gnepghhfvd
      181 vteigaplda hrddladaqr rsismlldaa aagpsthlle mpcsggavaa ealarrctld
      241 vvtfdarvrk sleeqlilsg aegaaridvl dspaeieala rqrrgvydav vsmqafenmp
      301 hqeqiaylvs aeqmlaqggk vvlqtivrtn nysrsaaaal astagyawpr mnvvscddva
      361 rivdkhtalr vtavttapeh laaslrlqrm afdahlrdaa adgydvvfrr mwtwqlalre
      421 alarlemldl aqvtmvqrhr ggrr
//
LOCUS       WP_257964365            1071 aa            linear   BCT 02-MAR-2025
DEFINITION  arabinosyltransferase domain-containing protein [Corynebacterium
            coyleae].
ACCESSION   WP_257964365
VERSION     WP_257964365.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium coyleae
  ORGANISM  Corynebacterium coyleae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (residues 1 to 1071)
  AUTHORS   Belanger,A.E., Besra,G.S., Ford,M.E., Mikusova,K., Belisle,J.T.,
            Brennan,P.J. and Inamine,J.M.
  TITLE     The embAB genes of Mycobacterium avium encode an arabinosyl
            transferase involved in cell wall arabinan biosynthesis that is the
            target for the antimycobacterial drug ethambutol
  JOURNAL   Proc Natl Acad Sci U S A 93 (21), 11919-11924 (1996)
   PUBMED   8876238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016484.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04602.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Corynebacterium coyleae"
                     /db_xref="taxon:53374"
     Protein         1..1071
                     /product="arabinosyltransferase domain-containing protein"
                     /GO_function="GO:0052636 - arabinosyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0071766 - Actinobacterium-type cell wall
                     biogenesis [Evidence IEA]"
                     /calculated_mol_wt=116599
     Region          30..186
                     /region_name="Arabino_trans_N"
                     /note="Arabinosyltransferase concanavalin like domain;
                     pfam17689"
                     /db_xref="CDD:435976"
     Region          190..638
                     /region_name="Arabinose_trans"
                     /note="Mycobacterial cell wall arabinan synthesis protein;
                     pfam04602"
                     /db_xref="CDD:377388"
     Region          668..1063
                     /region_name="Arabino_trans_C"
                     /note="EmbC C-terminal domain; pfam14896"
                     /db_xref="CDD:434294"
ORIGIN      
        1 mktgstrlia tvsgliafvl llltpflpvk qteasvswpq ndtvgsinap lislapqdle
       61 vtvpansvge lregqslifg tlpessnkat drglfitapd gglvvtslnd vlfeltpaev
      121 rnlpddaklh vsvtheettv eipgtshset seddyrpqvt gmytelenkh tliddglaah
      181 mninsrftss ptliksiamw ggllsalvsl walrkldgpa ryrrrqakgl kpldgvvagv
      241 lgfwhifgan tsddgflltm arvaantdym anyyrwygvp eapfgspfyd vlsllsevtt
      301 asmwmrlpal faalgtwwll sreilpklgp evaerrvahw taafvflafw lpynngtrpe
      361 piiavglmat walferaiat nrltpaawgt vtaaftlacg ptglaavgvf lislpavlrm
      421 igsrpqpris yvapfmgagl avmvpvfhdq tlatvleatk vrsevgpals wfeewtryat
      481 lleqtvdgsm srrfpmfvll lctglilwal akgdkttgtt krmmlilgma tffllftptk
      541 wthhfgiyag lggaiaavga vvlsriamks drnrtfamaa vlflmaftla gwnawwyvss
      601 favpwwdrtv qfkaieantv vlaialvvfa igvvqsmrgp raistrwsgv maapiavfai
      661 lmvtfscltf vksfvsqapa ysvgmgnvks fkgdvcalgg dvlleddtne sfltpvggvp
      721 lgksldagkn igftpdgvpa fiasetadts drtlsdtlsd ddtadvdpas deaqstsrvn
      781 tqgnrpksmr gvngstvrlp fgldynripv agtfddepkq saslettwye lpqlsddrpl
      841 lvtsvagria hhdingveqe gtelkleygt nkdgvvrklg evemldqgpt plwrnlrfpl
      901 adlpeeanvv rlvgedtsla ekdwlavtpl rnpkliplse rfdsdtpgll dwtvafqypc
      961 qrpffhangv teipefrimp dapgkqqlsg fmdflgggal apaeavntsy eipgylkddw
     1021 qrdwgsvaqy eprrnyvgdv pelahvdtev ttrsglytpg pmkvrnpdeq g
//
LOCUS       WP_257964385             637 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramoyl-L-alanine amidase [Corynebacterium coyleae].
ACCESSION   WP_257964385
VERSION     WP_257964385.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium coyleae
  ORGANISM  Corynebacterium coyleae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (residues 1 to 637)
  AUTHORS   Cheng,X., Zhang,X., Pflugrath,J.W. and Studier,F.W.
  TITLE     The structure of bacteriophage T7 lysozyme, a zinc amidase and an
            inhibitor of T7 RNA polymerase
  JOURNAL   Proc Natl Acad Sci U S A 91 (9), 4034-4038 (1994)
   PUBMED   8171031
REFERENCE   2  (residues 1 to 637)
  AUTHORS   Wang,X., Wilkinson,B.J. and Jayaswal,R.K.
  TITLE     Sequence analysis of a Staphylococcus aureus gene encoding a
            peptidoglycan hydrolase activity
  JOURNAL   Gene 102 (1), 105-109 (1991)
   PUBMED   1677905
REFERENCE   3  (residues 1 to 637)
  AUTHORS   Potvin,C., Leclerc,D., Tremblay,G., Asselin,A. and Bellemare,G.
  TITLE     Cloning, sequencing and expression of a Bacillus bacteriolytic
            enzyme in Escherichia coli
  JOURNAL   Mol Gen Genet 214 (2), 241-248 (1988)
   PUBMED   3070348
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013661.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01510.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Corynebacterium coyleae"
                     /db_xref="taxon:53374"
     Protein         1..637
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /EC_number="3.5.1.28"
                     /GO_function="GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=66603
     Region          210..344
                     /region_name="PGRP"
                     /note="Animal peptidoglycan recognition proteins
                     homologous to Bacteriophage T3 lysozyme; smart00701"
                     /db_xref="CDD:128941"
     Site            order(238,273,375,382,383)
                     /site_type="active"
                     /note="amidase catalytic site [active]"
                     /db_xref="CDD:133475"
     Site            order(238,375,383)
                     /site_type="other"
                     /note="Zn binding residues [ion binding]"
                     /db_xref="CDD:133475"
     Site            order(239..240,269,273,287,298..299,304,375,379,382,383)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:133475"
     Region          <580..631
                     /region_name="Psp3"
                     /note="LGFP repeat-containing protein, may be involved in
                     cell wall binding [Cell wall/membrane/envelope
                     biogenesis]; COG5479"
                     /db_xref="CDD:444230"
ORIGIN      
        1 mqqrrslqgg avrprravil pvvvsvllvv alvatqvfsg nrilhvqslg agapevysas
       61 esfasganit vddaairtqg geegevrrvv keftndrdfs ivgltwtgdr diaafvrsqq
      121 adgtwsewfe mdpvdppkgs dkfgtepifv gktkrvqvst ggvdlldggr tdsgapttak
      181 dlnavfldgg egqtqgginp vadsytwgmp kvitraqwga gssqapyyse pttaatvhht
      241 agsnnytese apgivrgiwt yhartlgwgd igyhalvdky gniyegragg mdrspqgahv
      301 ggfnqntwgv smlgdyqsaq pttaalramg eiigwkaava dfnpmgysyh qaefsfkgsk
      361 ysagqgasfs ninahrdfhy stcpgdnlys klpmirataa akyrtlkagn raglgnrgte
      421 stavtttaqs palpgdtanp tdptgntgtq gntgnnatgv ltgltsgdpi aiataagtvi
      481 gaillflaar dmlpgvserq gvevfqglnl tqvaelarkv gpavgpalna fgateaaavw
      541 taleptlgkl iagvggptgp aitfysngia arndqgeiia lvgkiaeawl qqgldagplg
      601 mpitreyypt sdvvrvdfeg gsitynpttn aldittr
//
LOCUS       WP_257964426             107 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Carnobacterium
            maltaromaticum].
ACCESSION   WP_257964426
VERSION     WP_257964426.1
KEYWORDS    RefSeq.
SOURCE      Carnobacterium maltaromaticum
  ORGANISM  Carnobacterium maltaromaticum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Carnobacterium.
REFERENCE   1  (residues 1 to 107)
  AUTHORS   Yuan,H.S., Finkel,S.E., Feng,J.A., Kaczor-Grzeskowiak,M.,
            Johnson,R.C. and Dickerson,R.E.
  TITLE     The molecular structure of wild-type and a mutant Fis protein:
            relationship between mutational changes and recombinational
            enhancer function or DNA binding
  JOURNAL   Proc Natl Acad Sci U S A 88 (21), 9558-9562 (1991)
   PUBMED   1946369
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02954.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Carnobacterium maltaromaticum"
                     /db_xref="taxon:2751"
     Protein         1..107
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /calculated_mol_wt=12288
     Region          <5..102
                     /region_name="RocR"
                     /note="RocR-type transcriptional regulator, contains PAS,
                     AAA-type ATPase, and DNA-binding Fis domains
                     [Transcription, Signal transduction mechanisms]; COG3829"
                     /db_xref="CDD:443041"
ORIGIN      
        1 mlsewsgnvr elknyieylv vtadldlpvh qggyetssnd qieeslqaia gecdyqafiq
       61 yvekiyfqkk lessewnisq taeesqvsrp fiykkinele lkqnvts
//
LOCUS       WP_257964646             198 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257964646
VERSION     WP_257964646.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>198
                     /product="ABC transporter substrate-binding protein"
     Region          28..>198
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mkktsllgac ilalamsmgs geavaktppd qliigmnmnn lltldpaamt gnevvgivvn
       61 lydslveldp eqlttvrpal akswdispdg ktltfhlrdd vkfhsgnplt aadvvwsmrr
      121 ilhlnlaqas vwksygfskk nidsqvsapd rftvqivlpk dndpqlviys laalgnlgvl
      181 dsktvqshqq dndwgnrw
//
LOCUS       WP_257964653              78 aa            linear   BCT 02-MAR-2025
DEFINITION  biofilm development regulator YmgB/AriR family protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257964653
VERSION     WP_257964653.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 78)
  AUTHORS   Lee,J., Page,R., Garcia-Contreras,R., Palermino,J.M., Zhang,X.S.,
            Doshi,O., Wood,T.K. and Peti,W.
  TITLE     Structure and function of the Escherichia coli protein YmgB: a
            protein critical for biofilm formation and acid-resistance
  JOURNAL   J Mol Biol 373 (1), 11-26 (2007)
   PUBMED   17765265
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022255.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10798.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..78
                     /product="biofilm development regulator YmgB/AriR family
                     protein"
                     /GO_process="GO:0071468 - cellular response to acidic pH
                     [Evidence IEA]"
     Region          20..77
                     /region_name="YmgB"
                     /note="Biofilm development protein YmgB/AriR; cl12389"
                     /db_xref="CDD:472312"
ORIGIN      
        1 lqdtalsdyf rnagdklvde savmslains ilqseghlnn kaiilwliqa lettddvvta
       61 dvirktleiv vgytmddi
//
LOCUS       WP_257964669             174 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257964669
VERSION     WP_257964669.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 174)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..174
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          1..168
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(1..2,5,9,11..17,102..107,113..114,116..117)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176102"
ORIGIN      
        1 ltrfhqqcpq vditlitqpt rqltegvlta aldaalvclp pgadgqpacp delaftpvfy
       61 etlmlvrpqt pgplrfaafa sgcsyralge rwlaeqqaav evhevnsyhs mlacvasgry
      121 acllpqsvls lmtlpencls eplceattql iwrsglsapa lsewrkllqs vaig
//
LOCUS       WP_257964667              96 aa            linear   BCT 02-MAR-2025
DEFINITION  globin domain-containing protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257964667
VERSION     WP_257964667.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 96)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 96)
  AUTHORS   Bogusz,D., Appleby,C.A., Landsmann,J., Dennis,E.S., Trinick,M.J.
            and Peacock,W.J.
  TITLE     Functioning haemoglobin genes in non-nodulating plants
  JOURNAL   Nature 331 (6152), 178-180 (1988)
   PUBMED   2448639
REFERENCE   3  (residues 1 to 96)
  AUTHORS   Bashford,D., Chothia,C. and Lesk,A.M.
  TITLE     Determinants of a protein fold. Unique features of the globin amino
            acid sequences
  JOURNAL   J Mol Biol 196 (1), 199-216 (1987)
   PUBMED   3656444
REFERENCE   4  (residues 1 to 96)
  AUTHORS   Kinniburgh,A.J., Maquat,L.E., Schedl,T., Rachmilewitz,E. and
            Ross,J.
  TITLE     mRNA-deficient beta o-thalassemia results from a single nucleotide
            deletion
  JOURNAL   Nucleic Acids Res 10 (18), 5421-5427 (1982)
   PUBMED   6292840
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012272.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00042.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>96
                     /product="globin domain-containing protein"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
     Region          1..>96
                     /region_name="PRK13289"
                     /note="NO-inducible flavohemoprotein"
                     /db_xref="CDD:237337"
ORIGIN      
        1 mldaqtiatv katipllvet gpkltahfyd rmfahnpelk eifnmsnqrn gdqrealfna
       61 iaayasnidn lpallpavek iaqkhtsfqi kpeqyn
//
LOCUS       WP_257964671             155 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar phosphate nucleotidyltransferase, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257964671
VERSION     WP_257964671.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 155)
  AUTHORS   Jensen,S.O. and Reeves,P.R.
  TITLE     Domain organisation in phosphomannose isomerases (types I and II)
  JOURNAL   Biochim Biophys Acta 1382 (1), 5-7 (1998)
   PUBMED   9507048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012695.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00483.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..155
                     /product="sugar phosphate nucleotidyltransferase"
                     /GO_function="GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <1..155
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
ORIGIN      
        1 dlsrdnlaem isrfdetgas qimvepvedv taygvvdckg eslkpgesvp mvgvvekpka
       61 dvapsnlavv gryvlsadiw pllaktppga gdeiqltdai dmlieketve ayhmkgkshd
      121 cgnklgymqa fveygirhkt lgddfkawle tavak
//
LOCUS       WP_257964415             209 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: complement resistance protein TraT, partial
            [Klebsiella].
ACCESSION   WP_257964415
VERSION     WP_257964415.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella
  ORGANISM  Klebsiella
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae.
REFERENCE   1  (residues 1 to 209)
  AUTHORS   Chang,H.J., Sheu,S.Y. and Lo,S.J.
  TITLE     Expression of foreign antigens on the surface of Escherichia coli
            by fusion to the outer membrane protein traT
  JOURNAL   J Biomed Sci 6 (1), 64-70 (1999)
   PUBMED   9933744
REFERENCE   2  (residues 1 to 209)
  AUTHORS   Jalajakumari,M.B., Guidolin,A., Buhk,H.J., Manning,P.A., Ham,L.M.,
            Hodgson,A.L., Cheah,K.C. and Skurray,R.A.
  TITLE     Surface exclusion genes traS and traT of the F sex factor of
            Escherichia coli K-12. Determination of the nucleotide sequence and
            promoter and terminator activities
  JOURNAL   J Mol Biol 198 (1), 1-11 (1987)
   PUBMED   3323526
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017619.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05818.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Klebsiella"
                     /db_xref="taxon:570"
     gene            <1..209
                     /gene="traT"
     Protein         <1..209
                     /product="complement resistance protein TraT"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
     Region          1..209
                     /region_name="TraT"
                     /note="Enterobacterial TraT complement resistance protein;
                     cl19728"
                     /db_xref="CDD:450348"
ORIGIN      
        1 vktqmsetiw lepsnnktvy lqikntsdkd msglqakias avtskgyqvv snpdtagywi
       61 qanvlkadkm dlresqgwls rgyegavtga algagitayn sssagatlgv glaaglvgma
      121 adamvedvny tmitdvqiae rtktqvqtdn vavlrqgtsg akvqtstetg nqhkyqtrvv
      181 snankvnlkf peaqpvledq laksianil
//
LOCUS       WP_257964874             531 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Corynebacterium
            coyleae].
ACCESSION   WP_257964874
VERSION     WP_257964874.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium coyleae
  ORGANISM  Corynebacterium coyleae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Corynebacterium coyleae"
                     /db_xref="taxon:53374"
     Protein         1..531
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=57470
     Region          51..513
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mrpkmvigsk vaavlaatal vlsgcassdn dddestklfg yqvtsnlrtt nagslegstd
       61 laqslsgrly pgvyvpgpsg qlipntdlvk tqvlpgdqrk viytlseaav fsdgtpvtca
      121 dylltfaagq ypatfgsnmp lfgdtdslsc tpgskeftvt fkegrgarwr glfepgtvlp
      181 ahavaaktnr svedlvadll sddlerlkpi aqvwrhgfdl kefdpelqvs fgpfkvaevg
      241 ekgqvrlvan ehyygdapqt aamvvwpgsv dsaelaaska mkigdlrqlq pqwydedaeg
      301 nrldvkttig eltemltlpe vgfwadpdhr kalarcidpr avaaasseka gvevpvaplh
      361 viqhtdplaq rmadiaapfl dvniqeasal rgstlrigyv ypderwaamv esmrrtcepa
      421 gitivdvtge gktladlphv eydewrnesv hdgeadailr vvdpmseypa annraqdlga
      481 lraqeghlwk tlpsiplaaq prtfvvdnav rnvvpytgls gigwnmdrwf n
//
LOCUS       WP_257964923             138 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Corynebacterium coyleae].
ACCESSION   WP_257964923
VERSION     WP_257964923.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium coyleae
  ORGANISM  Corynebacterium coyleae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (residues 1 to 138)
  AUTHORS   Mullin,D.A., Zies,D.L., Mullin,A.H., Caballera,N. and Ely,B.
  TITLE     Genetic organization and transposition properties of IS511
  JOURNAL   Mol Gen Genet 254 (4), 456-463 (1997)
   PUBMED   9180700
REFERENCE   2  (residues 1 to 138)
  AUTHORS   Fischer,J., Maier,H., Viell,P. and Altenbuchner,J.
  TITLE     The use of an improved transposon mutagenesis system for DNA
            sequencing leads to the characterization of a new insertion
            sequence of Streptomyces lividans 66
  JOURNAL   Gene 180 (1-2), 81-89 (1996)
   PUBMED   8973350
REFERENCE   3  (residues 1 to 138)
  AUTHORS   Zekri,S. and Toro,N.
  TITLE     Identification and nucleotide sequence of Rhizobium meliloti
            insertion sequence ISRm6, a small transposable element that belongs
            to the IS3 family
  JOURNAL   Gene 175 (1-2), 43-48 (1996)
   PUBMED   8917074
  REMARK    Erratum:[Gene 1997 Mar 25;188(1):149]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01527.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Corynebacterium coyleae"
                     /db_xref="taxon:53374"
     Protein         1..138
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=15064
     Region          3..86
                     /region_name="InsE"
                     /note="Transposase InsE and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2963"
                     /db_xref="CDD:442203"
ORIGIN      
        1 mprkysdqfr qqcidevlmf gktrgavaqe ygvsssslgr wvakaegtlg tgsgshmraa
       61 daasqdpaem akrikelere neflkkrpps sprstprgpl rgncplprrr hplpslpsvn
      121 dvpcvgsiql rllrlaqa
//
LOCUS       WP_257964932             106 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Carnobacterium
            maltaromaticum].
ACCESSION   WP_257964932
VERSION     WP_257964932.1
KEYWORDS    RefSeq.
SOURCE      Carnobacterium maltaromaticum
  ORGANISM  Carnobacterium maltaromaticum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Carnobacterium.
REFERENCE   1  (residues 1 to 106)
  AUTHORS   Yuan,H.S., Finkel,S.E., Feng,J.A., Kaczor-Grzeskowiak,M.,
            Johnson,R.C. and Dickerson,R.E.
  TITLE     The molecular structure of wild-type and a mutant Fis protein:
            relationship between mutational changes and recombinational
            enhancer function or DNA binding
  JOURNAL   Proc Natl Acad Sci U S A 88 (21), 9558-9562 (1991)
   PUBMED   1946369
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02954.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Carnobacterium maltaromaticum"
                     /db_xref="taxon:2751"
     Protein         1..106
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /calculated_mol_wt=12174
     Region          <4..101
                     /region_name="RocR"
                     /note="RocR-type transcriptional regulator, contains PAS,
                     AAA-type ATPase, and DNA-binding Fis domains
                     [Transcription, Signal transduction mechanisms]; COG3829"
                     /db_xref="CDD:443041"
ORIGIN      
        1 msewsgnvre lknyieylvv tadldlpvhq ggyetssndq ieeslqaiag ecdyqafiqy
       61 vekiyfqkkl essewnisqt aeesqvsrpf iykkinelel kqnvts
//
LOCUS       WP_257964935             177 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Carnobacterium maltaromaticum].
ACCESSION   WP_257964935
VERSION     WP_257964935.1
KEYWORDS    RefSeq.
SOURCE      Carnobacterium maltaromaticum
  ORGANISM  Carnobacterium maltaromaticum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Carnobacterium.
REFERENCE   1  (residues 1 to 177)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Carnobacterium maltaromaticum"
                     /db_xref="taxon:2751"
     Protein         1..>177
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>177
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 makatfdrsk shvnnigtig hvdhgkttlt aaiatvlskh gggsaqnyad idnapeeker
       61 gitintshie yetetrhyah vdypyivvfl nkvdmvddee llelvemevr dllseydfpg
      121 ddtpviagsa lkalegeasy eekvlelmaa vdeyiptpqr dtekpfmmpv edvfsit
//
LOCUS       WP_257963710            1070 aa            linear   BCT 02-MAR-2025
DEFINITION  Fn3-like domain-containing protein [Carnobacterium maltaromaticum].
ACCESSION   WP_257963710
VERSION     WP_257963710.1
KEYWORDS    RefSeq.
SOURCE      Carnobacterium maltaromaticum
  ORGANISM  Carnobacterium maltaromaticum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Carnobacterium.
REFERENCE   1  (residues 1 to 1070)
  AUTHORS   Brown,C.K., Gu,Z.Y., Matsuka,Y.V., Purushothaman,S.S., Winter,L.A.,
            Cleary,P.P., Olmsted,S.B., Ohlendorf,D.H. and Earhart,C.A.
  TITLE     Structure of the streptococcal cell wall C5a peptidase
  JOURNAL   Proc Natl Acad Sci U S A 102 (51), 18391-18396 (2005)
   PUBMED   16344483
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018035.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06280.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Carnobacterium maltaromaticum"
                     /db_xref="taxon:2751"
     Protein         1..1070
                     /product="Fn3-like domain-containing protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=118514
     Region          <3..43
                     /region_name="Peptidases_S8_S53"
                     /note="Peptidase domain in the S8 and S53 families;
                     cl10459"
                     /db_xref="CDD:415849"
     Region          58..164
                     /region_name="fn3_6"
                     /note="Fibronectin type-III domain; cl05663"
                     /db_xref="CDD:471288"
     Region          511..595
                     /region_name="Glucodextran_B"
                     /note="Glucodextranase, domain B; pfam09136"
                     /db_xref="CDD:430428"
ORIGIN      
        1 miefskayll ntaipvmdqq hsdviisprr qgagllqadq aiknkvyltd aktgkasial
       61 kqinqstkis lqlknagkqd isydfhdfgg vytedrtata evyekkidga dikitsseik
      121 lkagetktiq ltldlpdtfs knqfvegyig lasetqpdlv ipymgfygdy seaaildtpv
      181 ysgnsiqgkg fftdksntfl glekgtinpn lvaispnkdg rkdeakptly flrhaktaty
      241 eivdsnkkvi rrlnedhnvi kdyfnpaisa ftahtvtaat wngmiynpkt ggndvvpdgh
      301 yqmkitvqgm tekagtqetf lpikvdtksp sisqakfvtp dslslkiedq lsgtdlrsva
      361 iavngqiety dlsatengel tvplkntqqv angknqvevv vsdyagnigh fkefisfgtt
      421 eefvlfnlse nalittasns ystekksytv kgyypagksi yvngylidnq agyfdievpl
      481 tenstelifs qeanqqtiik rvavrakvtp peltidspte svvtdenhyl vtgktgsstk
      541 vlevvnqsng akinstdaiq adgqfsteis lvngqntivv taldefgnki skiislrtts
      601 ynqptilals nlnvvgftqv gvgnpnydei skeytikgrl kepveqftin gkdvaydpie
      661 ltfsypvplk qgkntvafyl qdsainaekp lvdegytlll dtvlptldve nlqtdsqgny
      721 qiytnqnpfl lkglisdnfs gyrlyinnen vltdanyfif dekffanrla apfeypvnvt
      781 egensvqigl ldtlnnltkk aisifyrqts plapiviadt tsltnkavnl tatseaetli
      841 yyclsgeeyq lytdqiavts nqkisfktld kygnysepti yevknsqqvi alqpkinvsp
      901 renltesvqi slgyqkelte reqtfthlry sldngltyse yqapfkleks adiyaqsydd
      961 agnqseiike tvlfeeivee kekpetemtn ptipslkpeq eavnsiiest kvkesatnlv
     1021 qptmanelnd kdqlpktgid vkqsysilgl wisfcsiyll lknkknssnv
//
LOCUS       WP_257965084             212 aa            linear   BCT 02-MAR-2025
DEFINITION  SulP family inorganic anion transporter, partial [Klebsiella
            quasipneumoniae].
ACCESSION   WP_257965084
VERSION     WP_257965084.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00916.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..>212
                     /product="SulP family inorganic anion transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:1902358 - sulfate transmembrane transport
                     [Evidence IEA]"
     Region          19..>212
                     /region_name="SUL1"
                     /note="Sulfate permease or related transporter, MFS
                     superfamily [Inorganic ion transport and metabolism];
                     COG0659"
                     /db_xref="CDD:440424"
ORIGIN      
        1 mppvsnsaas gnlrtilrsp slltrealag vltalalipe visfsviagv dpqvsliasv
       61 vlclamsllg grpamvtaaa gsvalvigpm vhqhgvgyil pavilagiiq ilfglcgmar
      121 lmrfippavm tgfvnalgil iffaqvphfw srqplivglf vltllivlwa prfikaipap
      181 liaivaltly tvttgqllpt vgdegsmsgg lp
//
LOCUS       WP_257965109             153 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP cone domain-containing protein, partial [Klebsiella
            quasipneumoniae].
ACCESSION   WP_257965109
VERSION     WP_257965109.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Aravind,L., Wolf,Y.I. and Koonin,E.V.
  TITLE     The ATP-cone: an evolutionarily mobile, ATP-binding regulatory
            domain
  JOURNAL   J Mol Microbiol Biotechnol 2 (2), 191-194 (2000)
   PUBMED   10939243
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03477.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..>153
                     /product="ATP cone domain-containing protein"
     Region          1..>153
                     /region_name="RNR_PFL"
                     /note="Ribonucleotide reductase and Pyruvate formate
                     lyase; cl38938"
                     /db_xref="CDD:476821"
ORIGIN      
        1 mtphvmkrdg ckvpfkseri qeailraaka agvddadyca tvaevvsqqm qgraqvdine
       61 iqtavenqlm sgpykqlara yieyrhdrds qrekrgrlnq eirglveqtn sallnenank
      121 dskviptqrd llagivakhy arqhllphdv vma
//
LOCUS       WP_257965112              98 aa            linear   BCT 02-MAR-2025
DEFINITION  MetQ/NlpA family ABC transporter substrate-binding protein, partial
            [Klebsiella quasipneumoniae].
ACCESSION   WP_257965112
VERSION     WP_257965112.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 98)
  AUTHORS   Nguyen,P.T., Lai,J.Y., Lee,A.T., Kaiser,J.T. and Rees,D.C.
  TITLE     Noncanonical role for the binding protein in substrate uptake by
            the MetNI methionine ATP Binding Cassette (ABC) transporter
  JOURNAL   Proc Natl Acad Sci U S A 115 (45), E10596-E10604 (2018)
   PUBMED   30352853
REFERENCE   2  (residues 1 to 98)
  AUTHORS   Schwechheimer,C. and Kuehn,M.J.
  TITLE     Synthetic effect between envelope stress and lack of outer membrane
            vesicle production in Escherichia coli
  JOURNAL   J Bacteriol 195 (18), 4161-4173 (2013)
   PUBMED   23852867
REFERENCE   3  (residues 1 to 98)
  AUTHORS   Zhang,Z., Feige,J.N., Chang,A.B., Anderson,I.J., Brodianski,V.M.,
            Vitreschak,A.G., Gelfand,M.S. and Saier,M.H. Jr.
  TITLE     A transporter of Escherichia coli specific for L- and D-methionine
            is the prototype for a new family within the ABC superfamily
  JOURNAL   Arch Microbiol 180 (2), 88-100 (2003)
   PUBMED   12819857
REFERENCE   4  (residues 1 to 98)
  AUTHORS   Gal,J., Szvetnik,A., Schnell,R. and Kalman,M.
  TITLE     The metD D-methionine transporter locus of Escherichia coli is an
            ABC transporter gene cluster
  JOURNAL   J Bacteriol 184 (17), 4930-4932 (2002)
   PUBMED   12169620
REFERENCE   5  (residues 1 to 98)
  AUTHORS   Yu,F., Inouye,S. and Inouye,M.
  TITLE     Lipoprotein-28, a cytoplasmic membrane lipoprotein from Escherichia
            coli. Cloning, DNA sequence, and expression of its gene
  JOURNAL   J Biol Chem 261 (5), 2284-2288 (1986)
   PUBMED   3003106
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015159.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03180.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         <1..98
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
     Region          <1..98
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 phhlkimele gaqlprvldd pkvdvaiist tylqqtglsp vrdgifiedk nspyvniivt
       61 rednkdaenv kefmqsyqsp evakaaetif nggavpgw
//
LOCUS       WP_257965116             130 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Klebsiella
            quasipneumoniae].
ACCESSION   WP_257965116
VERSION     WP_257965116.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 130)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..>130
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          2..>130
                     /region_name="MenD"
                     /note="2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-
                     carboxylate synthase [Coenzyme transport and metabolism];
                     COG1165"
                     /db_xref="CDD:440779"
ORIGIN      
        1 msvsafnrrw aavilealtr hgvqhiciap gsrstpltla aaenrafihh thfderglgh
       61 lalglakasr qpvavivtsg tatanlypal ieagltgekl illtadrppe lidcganqai
      121 rqpgmfashp
//
LOCUS       WP_257965118              82 aa            linear   BCT 02-MAR-2025
DEFINITION  S4 domain-containing protein, partial [Klebsiella quasipneumoniae].
ACCESSION   WP_257965118
VERSION     WP_257965118.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 82)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Novel predicted RNA-binding domains associated with the translation
            machinery
  JOURNAL   J Mol Evol 48 (3), 291-302 (1999)
   PUBMED   10093218
REFERENCE   2  (residues 1 to 82)
  AUTHORS   Davies,C., Gerstner,R.B., Draper,D.E., Ramakrishnan,V. and
            White,S.W.
  TITLE     The crystal structure of ribosomal protein S4 reveals a two-domain
            molecule with an extensive RNA-binding surface: one domain shows
            structural homology to the ETS DNA-binding motif
  JOURNAL   EMBO J 17 (16), 4545-4558 (1998)
   PUBMED   9707415
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013633.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01479.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..>82
                     /product="S4 domain-containing protein"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
     Region          1..>82
                     /region_name="PRK11025"
                     /note="23S rRNA pseudouridine(955/2504/2580) synthase
                     RluC"
                     /db_xref="CDD:182909"
ORIGIN      
        1 mktetptvkm vaiaadeagq ridnflrtql kgvpksmiyr ilrkgevrvn kkrvkpeykl
       61 eagdevripp vrvaereeea vs
//
LOCUS       WP_257965120             249 aa            linear   BCT 02-MAR-2025
DEFINITION  stalk domain-containing protein, partial [Klebsiella
            quasipneumoniae].
ACCESSION   WP_257965120
VERSION     WP_257965120.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 249)
  AUTHORS   Wilmot,C.M., Hajdu,J., McPherson,M.J., Knowles,P.F. and
            Phillips,S.E.
  TITLE     Visualization of dioxygen bound to copper during enzyme catalysis
  JOURNAL   Science 286 (5445), 1724-1728 (1999)
   PUBMED   10576737
REFERENCE   2  (residues 1 to 249)
  AUTHORS   Parsons,M.R., Convery,M.A., Wilmot,C.M., Yadav,K.D., Blakeley,V.,
            Corner,A.S., Phillips,S.E., McPherson,M.J. and Knowles,P.F.
  TITLE     Crystal structure of a quinoenzyme: copper amine oxidase of
            Escherichia coli at 2 A resolution
  JOURNAL   Structure 3 (11), 1171-1184 (1995)
   PUBMED   8591028
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019450.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07833.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..>249
                     /product="stalk domain-containing protein"
     Region          37..>249
                     /region_name="tynA"
                     /note="primary-amine oxidase; PRK14696"
                     /db_xref="CDD:184793"
ORIGIN      
        1 manglkfspr ktalalavav vcawqspvfa hgseahmvpl dktleafgad vqwddyaqmf
       61 tlikdgayvk vkpgaktaiv ngktldlpvp vvmkdgkawv sdtfindvfq sgldqtfqve
      121 krphplnsls aaeisdavti vkaapefqpn trfseislhe pdkaavwafa lqgtpvdapr
      181 tadvvmldgk qvmeavvdlq hkkilswtpi kgahgmvlld dfasvqnitn assefatvlk
      241 khgitdpgk
//
LOCUS       WP_257965132             229 aa            linear   BCT 02-MAR-2025
DEFINITION  aconitase family protein, partial [Klebsiella quasipneumoniae].
ACCESSION   WP_257965132
VERSION     WP_257965132.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012550.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00330.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..>229
                     /product="aconitase family protein"
     Region          1..>219
                     /region_name="PRK09277"
                     /note="aconitate hydratase AcnA"
                     /db_xref="CDD:236445"
ORIGIN      
        1 msstlreask dtlqvnaktw hyyslplaek qlgdlsrlpk slkvlmenll rwqdgdsvte
       61 ediralagwl qqahadreia yrparvlmqd ftgvpavvdl aamreavkrl ggdtakvnpl
      121 spvdlvidhs vtvdrfgdde afednvrlem ernheryafl rwgqqafsrf svvppgtgic
      181 hqvnleylgr avwseevngk wmawpdtlvg tdshttming lgvlgwgvg
//
LOCUS       WP_257965142             228 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase, partial [Klebsiella
            quasipneumoniae].
ACCESSION   WP_257965142
VERSION     WP_257965142.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 228)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 228)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..>228
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          1..>228
                     /region_name="PRK10939"
                     /note="autoinducer-2 (AI-2) kinase; Provisional"
                     /db_xref="CDD:182853"
ORIGIN      
        1 msyllaldag tgsiravifd lngrqlavgq aewkhlsvdn vpgsmefdlt tnwqlacqci
       61 rqaldaarls padiqsvacc smregivlyd rngeaiwaca nvdarasrev aelkeihdyr
      121 fesevyevsg qtlalsampr llwlahhrpd iyrkaatitm isdwlaakls gelavdpsna
      181 gttgmldlfs rdwrpalldm aglradmlsp vketgtllga vteaaaqq
//
LOCUS       WP_257965154             157 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein, partial [Klebsiella quasipneumoniae].
ACCESSION   WP_257965154
VERSION     WP_257965154.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         <1..>157
                     /product="helicase-related protein"
     Region          <1..152
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 vqakrneaik rltdgrvnvl iatdvaargi dipdvshvfn fdmprtadiy lhrigrtgra
       61 gkkgtaislv eahdhlllgk igryveeplk arvidelrpk trapsekltg kpskkvlakr
      121 aekkekekek prvkkrhrdt knigkrrkps atgtpsa
//
LOCUS       WP_257965183              83 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6392 family protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257965183
VERSION     WP_257965183.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040077.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19929.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>83
                     /product="DUF6392 family protein"
     Region          1..>83
                     /region_name="DUF6392"
                     /note="Family of unknown function (DUF6392); pfam19929"
                     /db_xref="CDD:437761"
ORIGIN      
        1 miidveklvk qlgkpyheiy shglipyktk pygpidedea eldmkregil lvftnnsekn
       61 lteitlrled kgktdwvfpn pmp
//
LOCUS       WP_257965200             752 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Klebsiella pneumoniae].
ACCESSION   WP_257965200
VERSION     WP_257965200.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..752
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=86309
     Region          <118..247
                     /region_name="GlxA"
                     /note="Transcriptional regulator GlxA, contains an amidase
                     domain and an AraC-type DNA-binding HTH domain
                     [Transcription]; COG4977"
                     /db_xref="CDD:444002"
     Region          <598..746
                     /region_name="XynB"
                     /note="Beta-xylosidase [Carbohydrate transport and
                     metabolism]; COG3664"
                     /db_xref="CDD:442881"
ORIGIN      
        1 mtqpesdllt llwvlegsvn lavaegasqp laadglaivn rnrrwslrsa ganavmiltl
       61 saswlarldn affavdyqit prtrdaddgl rrlmrqllvs glvnhpchyr leanrwlsei
      121 alllatrfsq piastprrdt ekwsrriasv varieanyqr rlslqevaaa efvseawlsr
      181 lfrkevgvsf vqyltalrlr haadqllttr ktvqqiareq gfastrmmsd lfkrqhgvtp
      241 rqyreqhple larprppqad rwqpvaadrl yarlnepepr drespplpin ppqtreinlr
      301 drparpaalr htrmvvtvre lddllradvr releqlhhal pvyaidindp flssrlfgtg
      361 wddpqmagya cwynlqqifs wlaemgwqvi lhtgvttrsd llqrflqlaa nhfppatlns
      421 wrfvwhwspq aseaarqaaw rqqrgvlhrl lpqpqlgiwh rfapsdpgnd plfhspllae
      481 adflacqada neqldlaqvd ssrlassehy plhklrqihs alrqrqlnlp lwllswntlt
      541 gdtrdtngrf frgallmdnl lgvadqvwla gfwlnsglqg earangkldt sslalhylhg
      601 lprpvywvlw lwrrlrgeil vhdknllllh hqghyqlllr ntvvynpwls seaafiqrfs
      661 qpysvrlqgl dgswrikqhl fdqhhgalfp lvdafrsrsg pdaedyqwlm hqarpalsvd
      721 earldgywlr idslqsnala lyeftpqspt ap
//
LOCUS       WP_257965205             237 aa            linear   BCT 02-MAR-2025
DEFINITION  lyase family protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257965205
VERSION     WP_257965205.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00206.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>237
                     /product="lyase family protein"
     Region          2..>237
                     /region_name="PRK09053"
                     /note="3-carboxy-cis,cis-muconate cycloisomerase;
                     Provisional"
                     /db_xref="CDD:181627"
ORIGIN      
        1 mslltpmlrs spltdwfsda qrvqgmldfe aalaqaqaac gmvppeavgp ivaacrheai
       61 dfaalgeaav gagnlaiplv kqltaqvkar dpeaaryvhw gatsqdaidt glvlqlrgal
      121 daaetlleql laalalqadr yrdtvmpgrt wmqhalpvtf glklagtlda llrwqqrlre
      181 mrprllalqf ggaagtldal kekgpavgla laqilglslp dtpwhsqrdr lleagaw
//
LOCUS       WP_257965207             225 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257965207
VERSION     WP_257965207.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 225)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 225)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>225
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          3..>225
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mylgidlgts evkalviden heviashsap lsiqrphphw seqapelwwe ateylmatlr
       61 ekcaqhwpai kaiglsgqmh gavlldaege airpailwnd trcaaecael eamalelhqv
      121 agnlampgft apkllwvrrh epqhfqrtat vllpkdylry rmtgkkvsdm sdaagtlwld
      181 vakrdwsdal ldkcglsrsq mptlvegcei satldpqvaa rwgln
//
LOCUS       WP_257965210              58 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257965210
VERSION     WP_257965210.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 58)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..58
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>58
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          1..>58
                     /region_name="PDC1"
                     /note="TPP-dependent 2-oxoacid decarboxylase, includes
                     indolepyruvate decarboxylase [Carbohydrate transport and
                     metabolism, Coenzyme transport and metabolism, General
                     function prediction only]; COG3961"
                     /db_xref="CDD:443161"
ORIGIN      
        1 mqptytigdy lldrlvdcgi drlfgvpgdy nlqfldrvia hsalgwvgca nelnaaya
//
LOCUS       WP_257965212             218 aa            linear   BCT 02-MAR-2025
DEFINITION  lyase family protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257965212
VERSION     WP_257965212.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00206.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..218
                     /product="lyase family protein"
     Region          <1..210
                     /region_name="Lyase_I_like"
                     /note="Lyase class I_like superfamily: contains the lyase
                     class I family, histidine ammonia-lyase and phenylalanine
                     ammonia-lyase, which catalyze similar beta-elimination
                     reactions; cl00013"
                     /db_xref="CDD:469578"
ORIGIN      
        1 eagawfagvc gtlgkfandf sllmqtevae vgepvaegrg gsstmphkrn pvacaailta
       61 aqrtpglmat lyasqlqqhe ralggwqaew etlpelislv ggalaqseal vrdmqvfpqk
      121 mradldithg limaeavtla laefigkaea hhhiealcrq aldrhcplvd llaadpqvsq
      181 ylsrerlttl ldpatatgsa erfvrqvlar yqeqrdes
//
LOCUS       WP_257965213             177 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257965213
VERSION     WP_257965213.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 177)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>177
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          7..>176
                     /region_name="TktA1"
                     /note="Transketolase, N-terminal subunit [Carbohydrate
                     transport and metabolism]; COG3959"
                     /db_xref="CDD:443159"
ORIGIN      
        1 mnpyrydiqt lerkaravrr hivrlnansp agghtgadls qvelltalyf rvlnvapdrl
       61 ddpqrdiyiq skghavgcyy cvlaeagffp vewletyqha nshlpghpvr qktpgielnt
      121 galghglpva vglalaakks nstrriflit gdgelaegsn weaalaaahy gldnlvi
//
LOCUS       WP_257965244              37 aa            linear   BCT 02-MAR-2025
DEFINITION  winged helix-turn-helix transcriptional regulator [Lactobacillus
            crispatus].
ACCESSION   WP_257965244
VERSION     WP_257965244.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus crispatus
  ORGANISM  Lactobacillus crispatus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024804.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13412.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..37
                     /organism="Lactobacillus crispatus"
                     /db_xref="taxon:47770"
     Protein         1..37
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /calculated_mol_wt=4315
     Region          1..>27
                     /region_name="HTH_ASNC"
                     /note="helix_turn_helix ASNC type; smart00344"
                     /db_xref="CDD:214628"
ORIGIN      
        1 msyseisrkl gmskatiyrr frelrdkkaa pkddflh
//
LOCUS       WP_257965257             185 aa            linear   BCT 02-MAR-2025
DEFINITION  PBECR4 domain-containing protein [Lactobacillus crispatus].
ACCESSION   WP_257965257
VERSION     WP_257965257.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus crispatus
  ORGANISM  Lactobacillus crispatus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (residues 1 to 185)
  AUTHORS   Iyer,L.M., Burroughs,A.M., Anand,S., de Souza,R.F. and Aravind,L.
  TITLE     Polyvalent Proteins, a Pervasive Theme in the Intergenomic
            Biological Conflicts of Bacteriophages and Conjugative Elements
  JOURNAL   J Bacteriol 199 (15), e00245-17 (2017)
   PUBMED   28559295
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037419.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18813.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Lactobacillus crispatus"
                     /db_xref="taxon:47770"
     Protein         1..185
                     /product="PBECR4 domain-containing protein"
                     /calculated_mol_wt=21600
     Region          23..184
                     /region_name="PBECR4"
                     /note="phage-Barnase-EndoU-ColicinE5/D-RelE like
                     nuclease4; pfam18813"
                     /db_xref="CDD:436757"
ORIGIN      
        1 mnrnlfknan lkeigqsrry msiiydnadf yskhfvnkti iyttknkkie ltarrdnfmh
       61 lcgvtyidgp rkffndaldq kiqikkilik kdgstfqklq imnqfqemlg phlrltgrsn
      121 ftylkfdhsi rtnksilala llnnqnymip isllnlkfih pfpngekiik iesrdlktgk
      181 itiln
//
LOCUS       WP_257965283             135 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Lactobacillus
            crispatus].
ACCESSION   WP_257965283
VERSION     WP_257965283.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus crispatus
  ORGANISM  Lactobacillus crispatus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (residues 1 to 135)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 135)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 135)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 135)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Lactobacillus crispatus"
                     /db_xref="taxon:47770"
     Protein         1..135
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=15032
     Region          11..135
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            43..50
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213188"
     Site            order(46..47,49..51,78,113..114)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:213188"
     Site            75..78
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213188"
     Site            order(79,90..98)
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213188"
     Site            109..114
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213188"
     Site            117..120
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213188"
ORIGIN      
        1 msetkfnktl lsvshvdfsy pkrnlftdln fsiangerva lvgpngigks tlidlirkqi
       61 qpddgqiich geinyvpqvn dqtvindsks agekrlalie ntiwlpgsll lldeptvyld
      121 dtniqnllyl lknyd
//
LOCUS       WP_257965336             313 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein
            [Lactobacillus crispatus].
ACCESSION   WP_257965336
VERSION     WP_257965336.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus crispatus
  ORGANISM  Lactobacillus crispatus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Lactobacillus crispatus"
                     /db_xref="taxon:47770"
     Protein         1..313
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=35952
     Region          21..281
                     /region_name="ABC_membrane"
                     /note="ABC transporter transmembrane region; pfam00664"
                     /db_xref="CDD:459896"
ORIGIN      
        1 mntqqinfkw vvkhvpiylq ivflvlsais afegvlnavl fgqltninfs nidhvykfig
       61 lafgaylivy iamllfylvq nrivmllnia lkqeyfyskf ansdmkqarg advinsisgt
      121 akeieqkyff gitdivqfvf nvvasaivvv etnlilgiiy lllsaltlip syigkkrmne
      181 ktekwnksns qliqamkdif egrleilnfg vrhlffkrfd rilvneedky rkmnncqfqv
      241 qfiawlislv tlllpifigl lfmqrgwfnv tvaaiitlsl sadrvvgylr tialyqtqih
      301 stdairkiks ynf
//
LOCUS       WP_257965402             220 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY-family carbohydrate kinase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257965402
VERSION     WP_257965402.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 220)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 220)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02782.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..220
                     /product="FGGY-family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <1..211
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 ayrpapqsav hafchvlpnl whqmsvmlsa asclqwfcrl tgttevalla eiaelseedk
       61 anapfflpyl sgertphndp dargifwgmt haslraqlgy avlegvsfgi ndglqalkes
      121 gtpiaqcslv gggarspfwa qlladilamp vvthkggetg galgaarlac laagkpiaav
      181 cekpevwqtw radpirhhil mqryaqfkal ylndlhyrqh
//
LOCUS       WP_257965420             268 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257965420
VERSION     WP_257965420.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 268)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 268)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>268
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          1..>268
                     /region_name="PRK10939"
                     /note="autoinducer-2 (AI-2) kinase; Provisional"
                     /db_xref="CDD:182853"
ORIGIN      
        1 msyllaldag tgsiravifd lngrqlavgq aewkhlsvdn vpgsmefdlt tnwqlacqci
       61 rqaldaarls aadiqsvacc smregivlyd rngeaiwaca nvdarasrev aelkeihdyr
      121 fesevyevsg qtlalsampr llwlahhrpd iyrkaatitm isdwlaakls gelavdpsna
      181 gttgmldlfs rdwrpalldm aglradmlsp vketgtllga vteaaaqqsg lragtpvvmg
      241 ggdvqlgclg lgvvragqta vlggtfwq
//
LOCUS       WP_257965436              74 aa            linear   BCT 02-MAR-2025
DEFINITION  MT-A70 family methyltransferase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257965436
VERSION     WP_257965436.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 74)
  AUTHORS   Bujnicki,J.M., Feder,M., Radlinska,M. and Blumenthal,R.M.
  TITLE     Structure prediction and phylogenetic analysis of a functionally
            diverse family of proteins homologous to the MT-A70 subunit of the
            human mRNA:m(6)A methyltransferase
  JOURNAL   J Mol Evol 55 (4), 431-444 (2002)
   PUBMED   12355263
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016921.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05063.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>74
                     /product="MT-A70 family methyltransferase"
     Region          1..>74
                     /region_name="MT-A70"
                     /note="cl01947"
                     /db_xref="CDD:470404"
ORIGIN      
        1 mnrysliyad pawsygntis ngaaidhypt mslldmkrlp vwdlaadnav lamwytgthn
       61 qeaielaeaw gftv
//
LOCUS       WP_257965428             124 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257965428
VERSION     WP_257965428.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 124)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 124)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>124
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          13..>124
                     /region_name="VgrG"
                     /note="Uncharacterized conserved protein VgrG, implicated
                     in type VI secretion and phage assembly [Intracellular
                     trafficking, secretion, and vesicular transport, Mobilome:
                     prophages, transposons, General function prediction only];
                     COG3501"
                     /db_xref="CDD:442724"
ORIGIN      
        1 midslsslaq kamdealsls ryrvavhecs dfldvlrysa veslsqpwry dvavtcssad
       61 iacdtlllkp asftfqipvf dgipalpvrt vfgvvesfrr istsnddtry amtivprial
      121 ldyt
//
LOCUS       WP_257965451             146 aa            linear   BCT 02-MAR-2025
DEFINITION  rhodanese-like domain-containing protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257965451
VERSION     WP_257965451.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 146)
  AUTHORS   Gliubich,F., Gazerro,M., Zanotti,G., Delbono,S., Bombieri,G. and
            Berni,R.
  TITLE     Active site structural features for chemically modified forms of
            rhodanese
  JOURNAL   J Biol Chem 271 (35), 21054-21061 (1996)
   PUBMED   8702871
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00581.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>146
                     /product="rhodanese-like domain-containing protein"
     Region          12..100
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            68
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238089"
     Region          119..>146
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
ORIGIN      
        1 mptyayrqaa girqalldrr elalidvree adfatahplf avnlplskle levrrriprf
       61 ttpltvydng eglaeiaver lrswgyqdva llaeglagwr rsggelfqdv nsaskafgel
      121 vesvrhtpsl saqevqalid srqevv
//
LOCUS       WP_257965453             139 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6392 family protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257965453
VERSION     WP_257965453.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040077.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19929.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..139
                     /product="DUF6392 family protein"
     Region          <15..123
                     /region_name="DUF6392"
                     /note="Family of unknown function (DUF6392); pfam19929"
                     /db_xref="CDD:437761"
ORIGIN      
        1 dedededede aeldmkregi llvftnnsek nlteitlrle dkgktdwvfp npmpfgmepv
       61 mtqlwvrerf glpmiyadve iimtiymgvk evyalpaphq yiaavftynk dlfvetvtfy
      121 plerakeiqa vlekkrles
//
LOCUS       WP_257965459             304 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257965459
VERSION     WP_257965459.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>304
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          <1..304
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 deegrllhrp laehvvkrie gqpaivtgyn dkrdsepapl pfslsalqie aakrfgfsaq
       61 nvldicqkly ethklitypr sdsrylpeeh fagrhavlna iavhaadllp qpvvdpeirn
      121 rcwddkkvda hhaiiptars sqvkltdnea kvytliarqy lmqfcpdavf rkcqidleia
      181 ngkfvakarf laeagwrtll gskerdeend gtplpvvakg dellcergev verqtqpprh
      241 ftdatllsam tgiarfvqdk dlkkilratd glgteatrag iiellfkrgf lskkgryihs
      301 seag
//
LOCUS       WP_257965597             312 aa            linear   BCT 02-MAR-2025
DEFINITION  pseudouridine synthase [Kocuria rhizophila].
ACCESSION   WP_257965597
VERSION     WP_257965597.1
KEYWORDS    RefSeq.
SOURCE      Kocuria rhizophila
  ORGANISM  Kocuria rhizophila
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Kocuria.
REFERENCE   1  (residues 1 to 312)
  AUTHORS   Wrzesinski,J., Nurse,K., Bakin,A., Lane,B.G. and Ofengand,J.
  TITLE     A dual-specificity pseudouridine synthase: an Escherichia coli
            synthase purified and cloned on the basis of its specificity for
            psi 746 in 23S RNA is also specific for psi 32 in tRNA(phe)
  JOURNAL   RNA 1 (4), 437-448 (1995)
   PUBMED   7493321
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013045.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00849.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Kocuria rhizophila"
                     /db_xref="taxon:72000"
     Protein         1..312
                     /product="pseudouridine synthase"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /GO_process="GO:0001522 - pseudouridine synthesis
                     [Evidence IEA]"
                     /GO_process="GO:0009451 - RNA modification [Evidence IEA]"
                     /calculated_mol_wt=34197
     Region          61..301
                     /region_name="PseudoU_synth"
                     /note="Pseudouridine synthases catalyze the isomerization
                     of specific uridines in an RNA molecule to pseudouridines
                     (5-ribosyluracil, psi); cl00130"
                     /db_xref="CDD:469624"
     Site            order(136..139,243)
                     /site_type="active"
                     /db_xref="CDD:211324"
ORIGIN      
        1 mgptrvrmpg pgapdpvlds lpglpatavd yvrarfpdda awfaeqvaag rvlggggvvv
       61 tpetpyepgv svwfhrpvpd edappvmldv lhedewivav dkphglcstp kgenvrrsvv
      121 vaarcqfgnd eisalhrldr stggvlllcr raedrgafhr mfqertvrkt ywavagvner
      181 vgeqtvrves rirkiqgvvq afeepgevna vtdvrrvetf tdadgtwgly eiapltgrth
      241 qirvhmtslg lplrgdklyp qprqdfdved pdnplqliar siefvhprtg qtvridsrlt
      301 psshaaatga vt
//
LOCUS       WP_257965628             252 aa            linear   BCT 02-MAR-2025
DEFINITION  MaoC/PaaZ C-terminal domain-containing protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257965628
VERSION     WP_257965628.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 252)
  AUTHORS   Fukui,T., Shiomi,N. and Doi,Y.
  TITLE     Expression and characterization of (R)-specific enoyl coenzyme A
            hydratase involved in polyhydroxyalkanoate biosynthesis by
            Aeromonas caviae
  JOURNAL   J Bacteriol 180 (3), 667-673 (1998)
   PUBMED   9457873
REFERENCE   2  (residues 1 to 252)
  AUTHORS   Steinebach,V., Benen,J.A., Bader,R., Postma,P.W., De Vries,S. and
            Duine,J.A.
  TITLE     Cloning of the maoA gene that encodes aromatic amine oxidase of
            Escherichia coli W3350 and characterization of the overexpressed
            enzyme
  JOURNAL   Eur J Biochem 237 (3), 584-591 (1996)
   PUBMED   8647101
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013722.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01575.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..252
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
     Region          <4..245
                     /region_name="PaaN-DH"
                     /note="phenylacetic acid degradation protein paaN;
                     TIGR02278"
                     /db_xref="CDD:131331"
ORIGIN      
        1 asgelarefi lgaarahgri qilneassve stghgsplpq lvhggpgrag ggeelgglrs
       61 vkhymqrtav qgsptmlati gqqwvrgaqv sedrihpfrk yfeeiqpgds lltprrtlte
      121 adivnfacls gdhfyahmdk iaaaesifge rvvhgyflis aaaglfvdag vgpvianygm
      181 enlrfiepvk pgdtiqvrlt ckrktvkrqr sadekatgvv ewaveifnqh qqavalysil
      241 tlvarqqgdf pa
//
LOCUS       WP_257965653             216 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellin hook IN motif-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257965653
VERSION     WP_257965653.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 216)
  AUTHORS   Tasteyre,A., Karjalainen,T., Avesani,V., Delmee,M., Collignon,A.,
            Bourlioux,P. and Barc,M.C.
  TITLE     Molecular characterization of fliD gene encoding flagellar cap and
            its expression among Clostridium difficile isolates from different
            serogroups
  JOURNAL   J Clin Microbiol 39 (3), 1178-1183 (2001)
   PUBMED   11230454
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018853.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07196.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>216
                     /product="flagellin hook IN motif-containing protein"
     Region          <1..216
                     /region_name="PRK08869"
                     /note="polar flagellin E"
                     /db_xref="CDD:236344"
ORIGIN      
        1 vtalndelnr iaettsfggn kllngthgak sfqigadnge avmlelkdmr sdnkmmggvs
       61 yqaesgkgkd wnvaqgkndl kisltdsfgq eqeininaka gddieelaty ingqtdlvka
      121 svdqdgklqi fagnnkvege vsfsgglsge lglgdnkknv tvdtidvtsv ggaqesvaii
      181 daalkyvdsh raelgafqnr fnhaisnldn inenvn
//
LOCUS       WP_257965669            1032 aa            linear   BCT 02-MAR-2025
DEFINITION  BppU family phage baseplate upper protein [Lactobacillus gasseri].
ACCESSION   WP_257965669
VERSION     WP_257965669.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus gasseri
  ORGANISM  Lactobacillus gasseri
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (residues 1 to 1032)
  AUTHORS   Veesler,D., Spinelli,S., Mahony,J., Lichiere,J., Blangy,S.,
            Bricogne,G., Legrand,P., Ortiz-Lombardia,M., Campanacci,V., van
            Sinderen,D. and Cambillau,C.
  TITLE     Structure of the phage TP901-1 1.8 MDa baseplate suggests an
            alternative host adhesion mechanism
  JOURNAL   Proc Natl Acad Sci U S A 109 (23), 8954-8958 (2012)
   PUBMED   22611190
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022117.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10651.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Lactobacillus gasseri"
                     /db_xref="taxon:1596"
     Protein         1..1032
                     /product="BppU family phage baseplate upper protein"
                     /calculated_mol_wt=116017
     Region          19..139
                     /region_name="BppU_N"
                     /note="BppU N-terminal domain; pfam10651"
                     /db_xref="CDD:431419"
     Region          132..>319
                     /region_name="Rabaptin"
                     /note="pfam03528"
                     /db_xref="CDD:367545"
     Region          499..575
                     /region_name="pyocin_knob"
                     /note="knob domain of R1 and R2 pyocins and similar
                     domains; cd19958"
                     /db_xref="CDD:410997"
     Site            order(513..515,517,534,536,538..541,546..548,550..552,
                     556..557,559..561,563,569,572..575)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:410997"
ORIGIN      
        1 mlqavtlntn krtaalsrve lrdsdkgeil esfilnpdgt pydlngkslv fnenkdgdkf
       61 vsdsnvtivd arighityqv hdqvhsargt awfdiidkas gakvdstadf yievrdglkc
      121 tvynttyisd leklkqqmea lirqadgelk aelqraeqql nqelqnfrnq ynalsadfqn
      181 qfrnaqnarq qdytnqknai nqdwtnnknq iwsqwngdka nidkqaqdti qaikdnakqv
      241 ldkdqadwna kqhswddtfs rivkewqvkt nslnstvqdl ttkfgniine vtdlmnkklp
      301 dmnaktdavq akvnelrasl gqidwtsfak dselkkwifn sepgwiqlks nmtqwgssne
      361 miaaarisyd dvsrmniydy tgvagiersm levsdltpnt lyrlffewen skqltkiadn
      421 dykfrvsvyd knntdnilay qdlpadpvnk elfcltfdtn nvtdvfieln tgglndgihf
      481 twkignwllk pvqehvpiva iknntdlnti ktpgmyharg tdgianspip awfditinsd
      541 gmqngtqmlh akkenqvyvr swyngntftd wqritnagdl atklslsggn mqkgswinwd
      601 aqspynaheg niggiqwnga sdsikifgdn nasenldlai qlgnddsnhi sfrradgdev
      661 aaidmngnft gwinwakvan tginnptlgr yisqsntwnd iigqdngkna laairdesng
      721 sgntignfss givfgggdtk gvlnvaydkp qariiggngn gpvwhkdiaw kddlkvtvvr
      781 gfdvakkqns gakvenlnsq wlidqqallp faeainsikg qgsyrhdevv dvntftgian
      841 qvttyiltns nnknaphsmi ddsqsdnrgt lvvfnydgna ktqlwipvgs sgkrmgfawr
      901 ywegnnvpgw nvfydaitsv rssvdalrqd vtannvnltq fqkrvdpnsp qstftnmtvd
      961 cnqlnrtgyy hlincyvnng pykthgqhyi yvktevldeh ttfqtvyegd nlygrkmyng
     1021 kgqwhkytnt pi
//
LOCUS       WP_257965682             162 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase [Lactobacillus gasseri].
ACCESSION   WP_257965682
VERSION     WP_257965682.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus gasseri
  ORGANISM  Lactobacillus gasseri
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06028.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Lactobacillus gasseri"
                     /db_xref="taxon:1596"
     Protein         1..162
                     /product="alpha/beta hydrolase"
                     /calculated_mol_wt=17696
     Region          1..>157
                     /region_name="COG4814"
                     /note="Uncharacterized conserved protein with an
                     alpha/beta hydrolase fold [Function unknown]"
                     /db_xref="CDD:443842"
ORIGIN      
        1 mkkrkiylts ffialfllfl agcsqksqev pdkkvtvsln ntktiptfff hgwgssvnae
       61 khmanaakea gaantivqad vskngtvkln gtipknaksp iievnlednq sgktsyvkdv
      121 itavsnkyhy akinlvghsm gnlqianyin enynnkkiat dq
//
LOCUS       WP_257965688             233 aa            linear   BCT 02-MAR-2025
DEFINITION  DDE-type integrase/transposase/recombinase [Lactobacillus gasseri].
ACCESSION   WP_257965688
VERSION     WP_257965688.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus gasseri
  ORGANISM  Lactobacillus gasseri
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (residues 1 to 233)
  AUTHORS   Dyda,F., Hickman,A.B., Jenkins,T.M., Engelman,A., Craigie,R. and
            Davies,D.R.
  TITLE     Crystal structure of the catalytic domain of HIV-1 integrase:
            similarity to other polynucleotidyl transferases
  JOURNAL   Science 266 (5193), 1981-1986 (1994)
   PUBMED   7801124
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012870.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00665.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Lactobacillus gasseri"
                     /db_xref="taxon:1596"
     Protein         1..233
                     /product="DDE-type integrase/transposase/recombinase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=26817
     Region          <1..203
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 mcvngiytsk arfnkayryk asrpeetaen tlhrdfnagr pnekwctdit eekipgtsqk
       61 ifictifdly drfpvgyals krndtalvka alsaawdkep dshamlhsdr gfqftrapfk
      121 heleehgmsq smsragrcid ngpmegwqgl ikemravlyp nansyesmee afkasidyyi
      181 yhdpqerfng ktsaqvreea knnpdkvaay pikqdkryid fwrkvetkkn qsa
//
LOCUS       WP_257965693             417 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein
            [Lactobacillus gasseri].
ACCESSION   WP_257965693
VERSION     WP_257965693.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus gasseri
  ORGANISM  Lactobacillus gasseri
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Lactobacillus gasseri"
                     /db_xref="taxon:1596"
     Protein         1..417
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47105
     Region          7..>407
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
ORIGIN      
        1 mkkfinkkff alsillscls glelpfgtws yseifslite knipntirmv avitiaqill
       61 viikylntri lnrniacfnq nvreflmksn fieisennvs kqisflsndl nlieenylkq
      121 lfqlismivt ivgtsivavg nsflltlvfi sfaifssiip kffskktaqq snnwststgt
      181 yitfmsdflk nirtvlnyna ldtfikkgqk iitqstenkr lrdntiaksn fwvnifvysf
      241 dflpigigii mvikgmltla sfvavqysst wiinsfysin scrnqmssak pmidkllsfk
      301 peefdknipn snlntltlnn isfgykpgel vldkinlkik rgdkllltgk sgqgkstlln
      361 lltgqlkptk gnvlvngmtn qnytfsevqq tsqifndtll fnltlgkklk lsnflck
//
LOCUS       WP_257965706             172 aa            linear   BCT 02-MAR-2025
DEFINITION  low temperature requirement protein A [Lactobacillus gasseri].
ACCESSION   WP_257965706
VERSION     WP_257965706.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus gasseri
  ORGANISM  Lactobacillus gasseri
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Zheng,W. and Kathariou,S.
  TITLE     Differentiation of epidemic-associated strains of Listeria
            monocytogenes by restriction fragment length polymorphism in a gene
            region essential for growth at low temperatures (4 degrees C)
  JOURNAL   Appl Environ Microbiol 61 (12), 4310-4314 (1995)
   PUBMED   8534098
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018479.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06772.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Lactobacillus gasseri"
                     /db_xref="taxon:1596"
     Protein         1..172
                     /product="low temperature requirement protein A"
                     /calculated_mol_wt=19506
ORIGIN      
        1 mfgetiigia dyfrpntfsl ysilifltva llfftyalqf dkftdedqdd vtgnaliylh
       61 yliifgisli tvsikfihet danswfavlc lycgvglfyl gllfatrynk pqfklrrsti
      121 lvflittiig atacliwssf evitiltfii vainiswlvh lnlphikkgi ll
//
LOCUS       WP_257965708             171 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257965708
VERSION     WP_257965708.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 171)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>171
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
     Region          11..111
                     /region_name="Wzz"
                     /note="Chain length determinant protein; pfam02706"
                     /db_xref="CDD:460658"
ORIGIN      
        1 melkkephln ddiefrellt aiwkgkwfif gitlmfavgs ifytlslpnt ykasallaps
       61 esstggslsk iagqfggiaa lagvnlsggd tsqadlaiqv lksrqfvesf ierhdliipl
      121 mavkdwdmrn nqliiddniy dkknnewlrk akelrkpkps aqeafdvfsr e
//
LOCUS       WP_257965744             389 aa            linear   BCT 02-MAR-2025
DEFINITION  GHKL domain-containing protein [Lactobacillus crispatus].
ACCESSION   WP_257965744
VERSION     WP_257965744.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus crispatus
  ORGANISM  Lactobacillus crispatus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025854.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14501.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Lactobacillus crispatus"
                     /db_xref="taxon:47770"
     Protein         1..389
                     /product="GHKL domain-containing protein"
                     /calculated_mol_wt=44897
     Region          5..374
                     /region_name="CitA"
                     /note="Sensor histidine kinase DipB regulating
                     citrate/malate metabolism [Signal transduction
                     mechanisms]; COG3290"
                     /db_xref="CDD:442519"
ORIGIN      
        1 mnfgvtilei mmlslyfici kkqniklilg sclifgitdl siltleaffk iivpiengil
       61 nyifdlivni viicvtkkyn vdiknrlldk nssilvgvli yiyitgyvin ylvfsenepk
      121 rvlqfslgll vfqaifavll ymgvvkiqke iqteqqqkrm eaeiaqlkey sdyldknede
      181 lrnfkhdyqd ilnglrisae egnikavvqq lakytdsqvd dkslrkyqdv nhihvdelks
      241 iaitklakly neqfpysfgc nveiyripqs vnildivrii gitfdnaiee srkfsdksna
      301 kvdamyyqed gnfefkirnk ivndtklstn ilskegystk knhagiglan ikrieskyee
      361 cmlinygied gwftfdleim pdnenmeee
//
LOCUS       WP_257965768             172 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257965768
VERSION     WP_257965768.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 172)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 172)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 172)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>172
                     /product="ATP-binding protein"
     Region          1..>158
                     /region_name="PRK05559"
                     /note="DNA topoisomerase IV subunit B; Reviewed"
                     /db_xref="CDD:235501"
ORIGIN      
        1 mtqssynada ievltglepv rrrpgmytdt trpnhlgqev idnsvdeala ghakrvevil
       61 hadqslevid dgrgmpvdih peegvpavel ilcrlhaggk fsnknyqfsg glhgvgisvv
      121 nalskrvevn vrrdgqvysi afengekved lhvtgtcgtv sythspsprd is
//
LOCUS       WP_257965801             174 aa            linear   BCT 02-MAR-2025
DEFINITION  Gfo/Idh/MocA family oxidoreductase, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257965801
VERSION     WP_257965801.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 174)
  AUTHORS   Kingston,R.L., Scopes,R.K. and Baker,E.N.
  TITLE     The structure of glucose-fructose oxidoreductase from Zymomonas
            mobilis: an osmoprotective periplasmic enzyme containing
            non-dissociable NADP
  JOURNAL   Structure 4 (12), 1413-1428 (1996)
   PUBMED   8994968
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014893.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02894.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..174
                     /product="Gfo/Idh/MocA family oxidoreductase"
     Region          <1..156
                     /region_name="PRK11579"
                     /note="putative oxidoreductase; Provisional"
                     /db_xref="CDD:183212"
ORIGIN      
        1 hlidqalqlf glpqsvqgni atlrdgaein dwahvvlnyp ahkvilhcsm lvaggssrft
       61 vhgdkgsvik aradqqesql lagvvpgsag wgqdddplvi ydaslqahaq atpqgdqrqy
      121 ymlirdalkg qianpvppve alavmavlea avrsaesgmv qtldlsdder ntlr
//
LOCUS       WP_257965813             323 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257965813
VERSION     WP_257965813.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 323)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..323
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <1..323
                     /region_name="PRK08155"
                     /note="acetolactate synthase large subunit; cl39075"
                     /db_xref="CDD:453955"
ORIGIN      
        1 sqalgmlgmh gtyeanmtmh hsdvifavgv rfddrttnnl akycpnatvl hididptsis
       61 ktvpadvpiv gdarlvleqm lelleqeeaq qplddirdww qqieqwrarh clryddqsdk
      121 ikpqavieti wrltqgdayv tsdvgqhqmf aalyypfdkp rrwinsgglg tmgfglpaal
      181 gvkmalpdem vvcvtgdgsi qmniqelsta lqyelpvlvl nlnnrylgmv kqwqdmlysg
      241 rhsqsymesl pdfvrlaeay ghvgirisep qeletklaea leqvrqrrlv fvdvtvdgse
      301 hvypmqirgg gmdemwlskt ert
//
LOCUS       WP_257965817             254 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY-family carbohydrate kinase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257965817
VERSION     WP_257965817.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 254)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 254)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02782.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..254
                     /product="FGGY-family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <1..245
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 ggdnavsaig vgavspgdaf islgtsgvlf vvtdayrpap qsavhafchl lpnlwhqmsv
       61 mlsaasclqw fcrltgttev allaeiaels eedkanapff lpylsgertp hndpdargif
      121 wgmthaslra qlgyavlegv sfgindglqa lkesgtpiaq cslvgggars pfwaqlladi
      181 lampvvthkg getggalgaa rlaclaagkp iaavcekpev wqtwradpir hhtlmqryaq
      241 fkalylndlh yrqh
//
LOCUS       WP_257965831             211 aa            linear   BCT 02-MAR-2025
DEFINITION  MATE family efflux transporter, partial [Klebsiella pneumoniae].
ACCESSION   WP_257965831
VERSION     WP_257965831.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01554.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>211
                     /product="MATE family efflux transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          1..>211
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 mnvtsavrqa vertswfkkr qryrvlywre isplavpill enacvllmgv lstflvswlg
       61 keamagvgla dsfnmvimsf faaidlgttv vvafslgkrd rrraraaarq slvimtlfsi
      121 llagvihafg qeiidfvagd ataqvkdlal tyleltalsy paaaialigs galrgagttk
      181 ipllinggmn ilnilissvl iygifswpgl g
//
LOCUS       WP_257965836              65 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphate acyltransferase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257965836
VERSION     WP_257965836.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013665.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01515.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>65
                     /product="phosphate acyltransferase"
                     /GO_function="GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
     Region          1..>65
                     /region_name="PTA_PTB"
                     /note="Phosphate acetyl/butaryl transferase; cl17212"
                     /db_xref="CDD:450173"
ORIGIN      
        1 miidqcrkla lraparvvfp daldvrvlka ahylqqqgla hpilvaspfa lrqfalgerl
       61 pltgv
//
LOCUS       WP_257965850             272 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Lactobacillus
            crispatus].
ACCESSION   WP_257965850
VERSION     WP_257965850.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus crispatus
  ORGANISM  Lactobacillus crispatus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (residues 1 to 272)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 272)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 272)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 272)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Lactobacillus crispatus"
                     /db_xref="taxon:47770"
     Protein         1..272
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=31127
     Region          <2..>127
                     /region_name="YddA"
                     /note="ABC-type uncharacterized transport system, permease
                     and ATPase components [General function prediction only];
                     COG4178"
                     /db_xref="CDD:443337"
     Region          68..262
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            101..108
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213202"
     Site            order(104..105,107..109,140,226..227,258)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:213202"
     Site            201..210
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213202"
     Site            222..227
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213202"
     Site            230..233
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213202"
     Site            254..260
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213202"
ORIGIN      
        1 misgkmtigs fsiifqyfnq llgqvdeifs ilfkfesfkv awmrinnilt mkneqdgrki
       61 iskinliqvh dfniyldekt plftqnfsan fvtpgfyivr grngigkstl lrtiiglytp
      121 kkegkiting idadlinkrk lresnisclf qdiplpncsv rdylgsysdk sqvykseyfa
      181 kvfdspqfri ekildremse lstgeiqlvk lysavlktga qcflldepla niypelqsdl
      241 lkllqeiaqv nlviiishdl klnentknir ie
//
LOCUS       WP_257965857             167 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257965857
VERSION     WP_257965857.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 167)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>167
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..>167
                     /region_name="entF"
                     /note="enterobactin non-ribosomal peptide synthetase EntF;
                     PRK10252"
                     /db_xref="CDD:236668"
ORIGIN      
        1 mttrlplvaa qpgiwmaerl stlpgawsva hyvelrgald ptllgkaiva glqqadtlsl
       61 rfeeeegevw qwlaadrtfg epsiidlrta pdphraater mqadlaqdlr vdggnplvch
      121 qllrvgddrw ywyqryhhll vdgfsfpait rqiaaiyraw qrgeatp
//
LOCUS       WP_257965866             406 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein, partial
            [Lactobacillus crispatus].
ACCESSION   WP_257965866
VERSION     WP_257965866.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus crispatus
  ORGANISM  Lactobacillus crispatus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Lactobacillus crispatus"
                     /db_xref="taxon:47770"
     Protein         <1..406
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          40..>387
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
ORIGIN      
        1 ffvqtnhtrk ellflmfkei nlrnhsslhk lfyslesmel lqyfkrlkwe flfvtflivi
       61 nagfltlagi ssanalsava klkaerffmw valmggayif yaivnclvnv eqtrlaqnvd
      121 klirndiaqd lsqtsysgfh qqtvatynsw ltndittinn fgvedfmmii rqiseivfgm
      181 ltlayfnvsl vvtviiltii mgvvpnlfsk ilakrsleyt hanerlvnsi ndvlngfntl
      241 flanlpqtiv kkingasddv kkhalnyskt agitqaitng lafisqviil gqtgwlilhq
      301 ltpvgtisga qffastifae lsgisfnwqe fksvkpiiek fktiplktvd galpadfkls
      361 nleldkvsyq ysgqdkpife nlnlnfklkn kyilmgdsae fdfwlt
//
LOCUS       WP_257965879             149 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaA ATPase domain-containing protein [Lactobacillus crispatus].
ACCESSION   WP_257965879
VERSION     WP_257965879.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus crispatus
  ORGANISM  Lactobacillus crispatus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (residues 1 to 149)
  AUTHORS   Erzberger,J.P., Pirruccello,M.M. and Berger,J.M.
  TITLE     The structure of bacterial DnaA: implications for general
            mechanisms underlying DNA replication initiation
  JOURNAL   EMBO J 21 (18), 4763-4773 (2002)
   PUBMED   12234917
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012529.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00308.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Lactobacillus crispatus"
                     /db_xref="taxon:47770"
     Protein         1..149
                     /product="DnaA ATPase domain-containing protein"
                     /calculated_mol_wt=16638
ORIGIN      
        1 mdnpfnpsfg ripavylqrk kliadvsqgi enlnssytis ivygmrgigk tvfltamdrk
       61 isaypdwivv nlamgmkllp sfinslylna dsklkksfks ieglnfsnfg lslstdvskl
      121 tyqdiltnmf devrkndvkv litldevkl
//
LOCUS       WP_257965901             227 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257965901
VERSION     WP_257965901.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 227)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>227
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
     Region          1..>227
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 mssvtsnkqp ssehdeidlg rivgefidhr kliititsif taisiiymlf stpvyqadam
       61 iqveqkqgna lldnlsqmlp dsqpqsapei allqsrmilg qtvddlglqa kveqnyfpif
      121 gkgwarltge kaqrievsrl ylpndskdvp qieiqviddk nyriigddfd itakvgalie
      181 sngisimisd ikakpgtsft vsyltklrai selqqafsvs dlgkdtg
//
LOCUS       WP_257965906             158 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257965906
VERSION     WP_257965906.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 158)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..158
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <1..158
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 lmtalseael diafvrlpce sskafnlrii deepmvialp rdnplatqpt laleqlrdva
       61 pilfprevap glyelvynsc lragidmera wqssqisssl smvnagfgfa lvpqsmtciq
      121 qpnvsyhpls gaplktdiai awrrfersrt vkrflamf
//
LOCUS       WP_257965926             281 aa            linear   BCT 02-MAR-2025
DEFINITION  IclR family transcriptional regulator domain-containing protein,
            partial [Klebsiella pneumoniae].
ACCESSION   WP_257965926
VERSION     WP_257965926.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 281)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
REFERENCE   2  (residues 1 to 281)
  AUTHORS   Galinier,A., Bleicher,F., Negre,D., Perriere,G., Duclos,B.,
            Cozzone,A.J. and Cortay,J.C.
  TITLE     Primary structure of the intergenic region between aceK and iclR in
            the Escherichia coli chromosome
  JOURNAL   Gene 97 (1), 149-150 (1991)
   PUBMED   1995429
REFERENCE   3  (residues 1 to 281)
  AUTHORS   Smith,C.P. and Chater,K.F.
  TITLE     Structure and regulation of controlling sequences for the
            Streptomyces coelicolor glycerol operon
  JOURNAL   J Mol Biol 204 (3), 569-580 (1988)
   PUBMED   3225846
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01614.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..281
                     /product="IclR family transcriptional regulator
                     domain-containing protein"
     Region          33..281
                     /region_name="pcaR_pcaU"
                     /note="beta-ketoadipate pathway transcriptional
                     regulators, PcaR/PcaU/PobR family; TIGR02431"
                     /db_xref="CDD:131484"
ORIGIN      
        1 givicrelya atekdamsdn ipntlsarqa ehdpnfmlsl arglevlnaf tpqrqrltis
       61 qlsqktqisr aavrrclytl aalgmvhspd grsyellprv lavghaylag tplakvaqta
      121 ldnlgkalge scsaatldgd nvlyiaraav nnllsidlgr gsrlpawats mgrvllsalp
      181 eeqlevtlsr atlirytpht lcdlsglrae iarvrmqgya ladrqievgl cslavpvlsr
      241 hgqvvaalnv gvpaatvsaa alkekalapl rraamdlslq l
//
LOCUS       WP_257965927             281 aa            linear   BCT 02-MAR-2025
DEFINITION  BcsE family c-di-GMP-binding protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257965927
VERSION     WP_257965927.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 281)
  AUTHORS   Acheson,J.F., Ho,R., Goularte,N.F., Cegelski,L. and Zimmer,J.
  TITLE     Molecular organization of the E. coli cellulose synthase
            macrocomplex
  JOURNAL   Nat Struct Mol Biol 28 (3), 310-318 (2021)
   PUBMED   33712813
REFERENCE   2  (residues 1 to 281)
  AUTHORS   Zouhir,S., Abidi,W., Caleechurn,M. and Krasteva,P.V.
  TITLE     Structure and Multitasking of the c-di-GMP-Sensing Cellulose
            Secretion Regulator BcsE
  JOURNAL   mBio 11 (4), e01303-20 (2020)
   PUBMED   32788377
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 281)
  AUTHORS   Thongsomboon,W., Serra,D.O., Possling,A., Hadjineophytou,C.,
            Hengge,R. and Cegelski,L.
  TITLE     Phosphoethanolamine cellulose: A naturally produced chemically
            modified cellulose
  JOURNAL   Science 359 (6373), 334-338 (2018)
   PUBMED   29348238
REFERENCE   4  (residues 1 to 281)
  AUTHORS   Romling,U. and Galperin,M.Y.
  TITLE     Bacterial cellulose biosynthesis: diversity of operons, subunits,
            products, and functions
  JOURNAL   Trends Microbiol 23 (9), 545-557 (2015)
   PUBMED   26077867
REFERENCE   5  (residues 1 to 281)
  AUTHORS   Fang,X., Ahmad,I., Blanka,A., Schottkowski,M., Cimdins,A.,
            Galperin,M.Y., Romling,U. and Gomelsky,M.
  TITLE     GIL, a new c-di-GMP-binding protein domain involved in regulation
            of cellulose synthesis in enterobacteria
  JOURNAL   Mol Microbiol 93 (3), 439-452 (2014)
   PUBMED   24942809
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022448.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10995.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>281
                     /product="BcsE family c-di-GMP-binding protein"
                     /GO_function="GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
     Region          1..>281
                     /region_name="CBP_GIL"
                     /note="Cellulose biosynthesis GIL; cl17862"
                     /db_xref="CDD:473100"
ORIGIN      
        1 mdnvftlgis slwdevchmp vggvwwlnvd ryadavslfn qtlaaqakns hvaalvmgnk
       61 pkdiisldhi hgpdnialft lpnrpqalee ihrdlvcsle pgnylfillc aenawqninn
      121 eklcawvekt srwaqyhrca flainsaqei drqltpllre yrslsglasi ryqgdrhifd
      181 iawwgsdkgi saqqqlmvqh ddagwrlaqd aetsvqprsd ekailshvrv legapplsey
      241 wtlfdtndev fnagrtaqaa tilfsitqnt qieqlgryih t
//
LOCUS       WP_257965929             721 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257965929
VERSION     WP_257965929.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 721)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..721
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=78121
     Region          <26..>80
                     /region_name="PRK15313"
                     /note="intestinal colonization autotransporter adhesin
                     MisL"
                     /db_xref="CDD:237940"
     Region          <60..265
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          342..416
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); pfam02368"
                     /db_xref="CDD:396788"
     Region          426..506
                     /region_name="BID_2"
                     /note="Bacterial Ig-like domain 2; smart00635"
                     /db_xref="CDD:214752"
     Region          <611..>675
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllltslfg cnsdsgssts qppmslpeev lpdepeieap ipelpvpefp diskpevpet
       61 pevtppkpsd pvipeppvpd kvvsrialnq srvslaegel aqvkvigfyn ddtqddltsq
      121 vvwnvenadi vnidergvit avktgvsvir adldefssem tvqvvdaklt niyfdvphka
      181 iakglsfqak aygeytdkqt rdishlvewd stdcsvvmpg tngiftaqde gdadiyaeld
      241 gltsthgsit vtpavlvsmd isstalempl gthkplvvmg tlsdgeqvdl trgitwhadn
      301 dvveivdnvv kakhkgtalv taaldgvqse piqvqvtdai ltnievttna ssvakgnstq
      361 lsaqgvysde srvelteqva wwvdnqdvlq legarvkgla vgqamvyatk daitsaplqi
      421 qvtnavleki hvhpseitle kknvqrfyay geysdettqd vthrvtwrss nkavldliag
      481 glsnsaqlgs vtisasfgel kgisevkvve aeekesaisi cpqprsgegs aeaclmvasd
      541 edgrlftapp svklmnklgy elvkplsyda tkpktyvgik tedgtrgpeg dfamfnqygr
      601 dragltsqya nwchdlsvrn fagrdnwrra trnelfslyr asrgsvwdgt esiyeedkdg
      661 ggfgwpanse ywstslmdlp hhegvvydii nlhrgraqlv mdardpayas cvsdapgvpl
      721 k
//
LOCUS       WP_257965933             218 aa            linear   BCT 02-MAR-2025
DEFINITION  MATE family efflux transporter, partial [Klebsiella pneumoniae].
ACCESSION   WP_257965933
VERSION     WP_257965933.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01554.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..218
                     /product="MATE family efflux transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <1..218
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 vmgigipasi esvlfnggkl ltqmfvagmg tnviagnfia fsvaslinlp gnalgsasti
       61 itgkrlgkgq igqaefqawh vfwlstiilt liawgsapfa gfiasfythe edvkevvkql
      121 lwlnalfmpi wslswtlpca fkgardvryt mwvsmlgmwg crvvagytlg ivlgmgvigv
      181 wlgmvldwav rgvlfyfrmv sgrwlwkypr vkassees
//
LOCUS       WP_257965941             167 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257965941
VERSION     WP_257965941.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 167)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>167
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..>167
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(89,113,138,142)
                     /site_type="active"
                     /db_xref="CDD:187558"
ORIGIN      
        1 mgshtcvqll qqghevvild nlcnskrsvl pvierlggke atfiegdirn ealmteilhd
       61 haieavihfa glkavgesva kpleyydnnv tgtlklvsam raagvknfif sssatvygdq
      121 pkipyvesfp tgtpqspygk sklmveqilt dlqkaqpews iarlryf
//
LOCUS       WP_257965956             493 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257965956
VERSION     WP_257965956.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024487.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13087.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..493
                     /product="AAA domain-containing protein"
                     /calculated_mol_wt=55737
     Region          <3..302
                     /region_name="DNA2"
                     /note="Superfamily I DNA and/or RNA helicase [Replication,
                     recombination and repair]; COG1112"
                     /db_xref="CDD:440729"
     Region          320..417
                     /region_name="MTES_1575"
                     /note="REase_MTES_1575; pfam18741"
                     /db_xref="CDD:465853"
ORIGIN      
        1 mavakyippg sitfdivvmd easqvrpqda lscfargkqi vvvgdskqlp ptsffektvs
       61 ndaeddqedv gviddaesil davsdhfqkr qlkwhyrsrh esliafsnhr fydsslvvfp
      121 spwgqsdefg ikfnrvpegq flnsvnhges havvaaireh llsksseslg vvamnskqrd
      181 yieadlerli gkdkllreay elnqrsddpl fvknlenvqg derdvifisf tygpqekgaa
      241 nipqrfglin sasgwrrlnv lftrakkriq iyssmtvdqi vlnensslgv tslkgylkya
      301 qhgqlighdg vqqkepdsdf eisvmdvfar kgfecvpqvg vsgffidiav rdpgmpgryi
      361 mgiecdgaty hsskstrdrd rvrqgvlegl gwnirriwst dwfkhpeael kpiveelkrl
      421 sapikqqast esisevkeks aeqlshkaak tleealtryk lviekkypnt ephekllrpd
      481 miehlimdrp mth
//
LOCUS       WP_257965974             129 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6795 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257965974
VERSION     WP_257965974.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042847.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20598.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>129
                     /product="DUF6795 domain-containing protein"
     Region          35..>116
                     /region_name="DUF6795"
                     /note="Domain of unknown function (DUF6795); cl03084"
                     /db_xref="CDD:470730"
ORIGIN      
        1 akknslilvl alfsvgasam fwpfkkydve mspevrgvik ldgkpqvglt vhrelfyegy
       61 kkgktlkdea qtnelgefff pgvtvrsrap gdifggslnv hqkiylnwqg dqkkvwgvwv
      121 ppdgrkpll
//
LOCUS       WP_257965990             148 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257965990
VERSION     WP_257965990.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 148)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>148
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          1..137
                     /region_name="LysR_substrate"
                     /note="LysR substrate binding domain; pfam03466"
                     /db_xref="CDD:460931"
     Region          1..>68
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mpnsiassif gsilrklqer ypavifeiss snkvenlles nvdmairlnd vvddnliahk
       61 vgnyndvlis ndsneisstl liyknhsnke eirksycdvi evdntsilln fveqgvglgv
      121 ipnyllkgss hqellkvtht ysteksmy
//
LOCUS       WP_257966005             127 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257966005
VERSION     WP_257966005.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 127)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..127
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <1..127
                     /region_name="MenD"
                     /note="2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-
                     carboxylate synthase [Coenzyme transport and metabolism];
                     COG1165"
                     /db_xref="CDD:440779"
ORIGIN      
        1 rasarptlai vgdlsalydl nslallrqas aplvlivvnn nggqifsmlp tpqderrqfy
       61 lmpqdvdfsh aaamfglayh rpddwpslde alagawrrag atvielavne tdgaqtlqql
      121 laqvsrl
//
LOCUS       WP_257966038             113 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257966038
VERSION     WP_257966038.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 113)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..113
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <1..98
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 shtvwtarne wrlpgvegev rwkrdavlrc ndgyalrqaa iagagllmqp evlladalas
       61 gslvrvleaw tpqprpvhll wrqdrrplpk ltqfiahlqq gmadaltttr ase
//
LOCUS       WP_257966051             277 aa            linear   BCT 02-MAR-2025
DEFINITION  RES domain-containing protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257966051
VERSION     WP_257966051.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020387.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08808.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>277
                     /product="RES domain-containing protein"
ORIGIN      
        1 vdelvtginn fpqyniamkk eflaklikhh pllyvdwgeg ssyyrarymg ndaspidhvs
       61 kilcppkeir sygridsden eilytasskn talnelknyn nsfnyytiat friynsikvl
      121 pigeishtqv tgrgmllgnq sqsinklina cnpdevtrll itdkflsdsl msdnynitsy
      181 vancifekns diyviaypsk qhpgginfai knkviwdhlg inavryaqir hlacgyfeer
      241 ntrhvkgitq rgkliwdenh addeyytypl eplwtpg
//
LOCUS       WP_257966074            1004 aa            linear   BCT 02-MAR-2025
DEFINITION  mucin-binding protein [Lactobacillus gasseri].
ACCESSION   WP_257966074
VERSION     WP_257966074.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus gasseri
  ORGANISM  Lactobacillus gasseri
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (residues 1 to 1004)
  AUTHORS   MacKenzie,D.A., Tailford,L.E., Hemmings,A.M. and Juge,N.
  TITLE     Crystal structure of a mucus-binding protein repeat reveals an
            unexpected functional immunoglobulin binding activity
  JOURNAL   J Biol Chem 284 (47), 32444-32453 (2009)
   PUBMED   19758995
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17966.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Lactobacillus gasseri"
                     /db_xref="taxon:1596"
     Protein         1..1004
                     /product="mucin-binding protein"
                     /note="The YSIRK form of extended signal peptide directs
                     nascent proteins to the cross-wall site, while signal
                     peptides lacking YSIRK direct proteins instead to the cell
                     pole. A large fraction of YSIRK proteins are surface
                     proteins anchored by sortase-mediated processing of a
                     C-terminal LPXTG motif.; The YSIRK form of extended signal
                     peptide directs nascent proteins to the cross-wall site,
                     while signal peptides lacking YSIRK direct proteins
                     instead to the cell pole. A large fraction of YSIRK
                     proteins are surface proteins anchored by sortase-mediated
                     processing of a C-terminal LPXTG motif."
                     /calculated_mol_wt=111745
     Region          16..>198
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          644..705
                     /region_name="Muc_B2"
                     /note="Muc B2-like domain; pfam17966"
                     /db_xref="CDD:465593"
     Region          750..851
                     /region_name="MucBP_2"
                     /note="Mucin binding domain; pfam17965"
                     /db_xref="CDD:465592"
     Region          859..>915
                     /region_name="Muc_B2"
                     /note="Muc B2-like domain; pfam17966"
                     /db_xref="CDD:465593"
ORIGIN      
        1 mshktdlsfi aklngkekfs lrklsvglvt valgttffle ssntahaaev dttnqnvtsq
       61 estsdslksr tlniqktkat edattstktv qnneqtsvnq tsknneatvk qetnllatks
      121 ekatttqasa qainfeekvq attdqnqsta vsitgddank smmanvtqgr vyikqnkenp
      181 itinngqkit vsiaatnnll rfstppskin dfeistsqtn tnkiftftyt gsddgilsnf
      241 nptfyftadn datkqykdih gtypdfnlpv tvtlfnnqkf tqnlpikitp ykdlvvtkei
      301 lhgfvmgpkl igtpgqdgyp gnngsyteng atyygpepsa aadvpadkqk sarlmqyale
      361 wnygsakdps lnplmdvlvn ikfnkgqqil pstikvfkip anmevvdsdg qrvpinnyyn
      421 klatlpedtn fekllrdsis edkkqikidq kgnftangvd yskmgpyfiq ldtllnpnai
      481 dnwasnpdsg vgpsittpiv nendwkhsgs gsttntstqt ytdfkfdpav drvvriyfid
      541 entdkeipdt vrsiiaktns tvdnptssii ndlkkqgyvl dkqatngess nfsknlknyn
      601 isnqnfktds lennynsqki nikdkslkyy vylyhgttpv sdkktiketi nyvyangtqe
      661 gktaanpydk tvsytrtgtn dlvtdhitwe kwqpdssfna vespnandkn ytlvdkdeip
      721 viklnidndg kitiennvpl iytvhyyape harltfyddt enqnlsdylt kngqkasltd
      781 tyseldnnss kqpisftdad nivnflknnh yiftgvsgng sitnsdyski aygnfdndet
      841 kdqefilhfk haldnqneta vvnyvyesgp hagktvvdaa tspidqkity trtrtvdlvn
      901 dpkgentkws nwtpdkafie nfnlpekvsg ldnqekiysl dlaqvkatkd gkvfdysslk
      961 lpfetselsn dktinlkvti pytlaenitv nyiddttgkt lesk
//
LOCUS       WP_257965272              64 aa            linear   BCT 02-MAR-2025
DEFINITION  BcsE family c-di-GMP-binding protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257965272
VERSION     WP_257965272.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 64)
  AUTHORS   Acheson,J.F., Ho,R., Goularte,N.F., Cegelski,L. and Zimmer,J.
  TITLE     Molecular organization of the E. coli cellulose synthase
            macrocomplex
  JOURNAL   Nat Struct Mol Biol 28 (3), 310-318 (2021)
   PUBMED   33712813
REFERENCE   2  (residues 1 to 64)
  AUTHORS   Zouhir,S., Abidi,W., Caleechurn,M. and Krasteva,P.V.
  TITLE     Structure and Multitasking of the c-di-GMP-Sensing Cellulose
            Secretion Regulator BcsE
  JOURNAL   mBio 11 (4), e01303-20 (2020)
   PUBMED   32788377
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 64)
  AUTHORS   Thongsomboon,W., Serra,D.O., Possling,A., Hadjineophytou,C.,
            Hengge,R. and Cegelski,L.
  TITLE     Phosphoethanolamine cellulose: A naturally produced chemically
            modified cellulose
  JOURNAL   Science 359 (6373), 334-338 (2018)
   PUBMED   29348238
REFERENCE   4  (residues 1 to 64)
  AUTHORS   Romling,U. and Galperin,M.Y.
  TITLE     Bacterial cellulose biosynthesis: diversity of operons, subunits,
            products, and functions
  JOURNAL   Trends Microbiol 23 (9), 545-557 (2015)
   PUBMED   26077867
REFERENCE   5  (residues 1 to 64)
  AUTHORS   Fang,X., Ahmad,I., Blanka,A., Schottkowski,M., Cimdins,A.,
            Galperin,M.Y., Romling,U. and Gomelsky,M.
  TITLE     GIL, a new c-di-GMP-binding protein domain involved in regulation
            of cellulose synthesis in enterobacteria
  JOURNAL   Mol Microbiol 93 (3), 439-452 (2014)
   PUBMED   24942809
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022448.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10995.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..64
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..64
                     /product="BcsE family c-di-GMP-binding protein"
                     /GO_function="GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
     Region          <1..63
                     /region_name="CBP_GIL"
                     /note="Cellulose biosynthesis GIL; cl17862"
                     /db_xref="CDD:473100"
ORIGIN      
        1 rmvwfedkqi lseivimrgv eparwntplp lsvgknetin athdgrhwrr ypephrlttr
       61 eeqa
//
LOCUS       WP_257966107             228 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257966107
VERSION     WP_257966107.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 228)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 228)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>228
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          3..>228
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mylgidlgts evkalviden heviashsap lsiqrphphw seqapelwwe ateylmatlr
       61 ekcaqhwpai kaiglsgqmh gavlldaegk airpailwnd trcaaecael eamapelhqv
      121 agnlampgft apkllwvrrh epqhfqrtat vllpkdylry rmtgkkvsdm sdaagtlwld
      181 vakrdwsdal ldkcglsrsq mpklvegcev satldpqvaa rwglnasv
//
LOCUS       WP_257966119             178 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein [Klebsiella
            pneumoniae].
ACCESSION   WP_257966119
VERSION     WP_257966119.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 178)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..178
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=19085
     Region          <2..162
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mtrdreakfa ftapfsdasv ailkrkgdsr insakdlqgm ivasqagapq iavlkeyeas
       61 vlkpttghgv keikafidyn eayaalaahr vdavvqslpn laplvktrgd tfeivrppfg
      121 patwyawagr kdadsaslvk fisdgivqln ksgklaqlqt kwlgfsmavp eqvptpan
//
LOCUS       WP_257966124             258 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein,
            partial [Klebsiella pneumoniae].
ACCESSION   WP_257966124
VERSION     WP_257966124.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 258)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>258
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
     Region          <1..258
                     /region_name="PRK10795"
                     /note="penicillin-binding protein 2; Provisional"
                     /db_xref="CDD:236761"
ORIGIN      
        1 pymalsalsa gvitpnttff gaptwtlpgt qrryrdwlkt ghgmlnvtka ieesadtffy
       61 qvafemgidr ihewlskfgy gqstgidlne eyagvlpsre wkqrvhkkpw yqgdtisvgi
      121 gqgywiatpi qmvkalttll nngkvqdphl lysmkqgnhv eryqqpanlp qvgdpkspyw
      181 givrngmygm anqpngtgyk lfhtapyqia aksgtsqvfs lkqnqtynak mipvrlrdhi
      241 fytlfapyqh pkvamali
//
LOCUS       WP_257966151             435 aa            linear   BCT 02-MAR-2025
DEFINITION  HipA domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257966151
VERSION     WP_257966151.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 435)
  AUTHORS   Black,D.S., Irwin,B. and Moyed,H.S.
  TITLE     Autoregulation of hip, an operon that affects lethality due to
            inhibition of peptidoglycan or DNA synthesis
  JOURNAL   J Bacteriol 176 (13), 4081-4091 (1994)
   PUBMED   8021189
REFERENCE   2  (residues 1 to 435)
  AUTHORS   Black,D.S., Kelly,A.J., Mardis,M.J. and Moyed,H.S.
  TITLE     Structure and organization of hip, an operon that affects lethality
            due to inhibition of peptidoglycan or DNA synthesis
  JOURNAL   J Bacteriol 173 (18), 5732-5739 (1991)
   PUBMED   1715862
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019421.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07804.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..435
                     /product="HipA domain-containing protein"
                     /calculated_mol_wt=48822
     Region          28..432
                     /region_name="HipA-like"
                     /note="serine/threonine-protein kinases similar to HipA
                     and CtkA; cl28916"
                     /db_xref="CDD:355792"
     Site            order(149..153,155,177,179,216,232..236,249,306,308,311,
                     328..329)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:341490"
ORIGIN      
        1 mhnpilyaha tnnnmlmgqf vqqsktygsf sysdewlayd safpislslp lvkgecssln
       61 alnfihnllp dlkeerlsla hsvgvqsnda ftllskighd ctggisftgs rqapnigley
      121 reisaselne lvtqrksflp ffgeyrpcis gtqrkttlar lngkwyvpqe kslsshiiky
      181 pmdaiaqsns vldmsssven efictqiake lnfkvpdmei ittesgakal avkrfdrcfg
      241 dgvvtrrhqe dfcqifgvpe yqkyqsennl svskivdvls lsaeskannh dffkfmvlqy
      301 flgatdghlk nfsvhiapsg hyqltpfydl lsaypaignr glnkrklkla mglkaskgyk
      361 yhiskiflrh ieqtasqfgi skvdcyeivs dflsqfsnal ssidkrfpek eftlvkdaiy
      421 qhateivgkl nrtik
//
LOCUS       WP_257966188             778 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Micrococcus luteus].
ACCESSION   WP_257966188
VERSION     WP_257966188.1
KEYWORDS    RefSeq.
SOURCE      Micrococcus luteus
  ORGANISM  Micrococcus luteus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Micrococcus.
REFERENCE   1  (residues 1 to 778)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Micrococcus luteus"
                     /db_xref="taxon:1270"
     Protein         1..778
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=82549
     Region          33..171
                     /region_name="sCache_3_2"
                     /note="Single cache domain 3; pfam17203"
                     /db_xref="CDD:435783"
     Region          149..>436
                     /region_name="CitA"
                     /note="Sensor histidine kinase DipB regulating
                     citrate/malate metabolism [Signal transduction
                     mechanisms]; COG3290"
                     /db_xref="CDD:442519"
     Region          541..773
                     /region_name="dpiA"
                     /note="two-component response regulator DpiA; Provisional;
                     PRK10046"
                     /db_xref="CDD:182208"
ORIGIN      
        1 mrhpwsiarr iavvhvalva aialfsvwsa ylqarevaqr veerhvqgvt tlvardpalv
       61 salragdapa lqagidgwia eaqvswltvm dpdgmrlasw rpeqvgvryp kpvdavvagd
      121 tvvelsstga agrsvralap vvdpedgtvl gvvttgvqis dvaimaqaqi pgillgsaav
      181 aavgllvawl vgrylnrvtl grgpeqiaeq fllaetamds leagvvvlap dgrarlhnda
      241 aarllgwega geprlptels aalpgavsge aslaaggrvl vvqqrvvrsp grsdpggsvp
      301 ptalaaaare gvttapagsr vlvlhdrtdl qrlgdeltva htlttalraq thehanqlht
      361 alalvesgrl eaaravpsrr apdeeasddv laalldakaa qarergvalt wsaeltapap
      421 lrpldlltvl gnlvdnalda aaapdlsaad rwvdvevvsd aagllvqagr rrprtlrrgp
      481 rptlrpglvd earrrrrtrh gavadaadrr ggrrgrgrrd rlghrvhrrg aphpptpggd
      541 mtarpyrvlv vedeqltaet yvahldrlpg fevaavagsl laarqvaaag lhadgrfpfd
      601 vvlldmnlpd ghgldflhql raagfhggvl altaatdlpv vrravaygvt hylvkpfgfd
      661 efadrlggfc aasamlagdg aldgqeqvda vfrvsrerra ealpkglteg tlrevmdllg
      721 adaetalsaa evgerlgisr vtarrylehl erirrvrrsa rhggrgrpeq eyrwagrt
//
LOCUS       WP_257966204            1944 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Klebsiella
            michiganensis].
ACCESSION   WP_257966204
VERSION     WP_257966204.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..1944
                     /organism="Klebsiella michiganensis"
                     /db_xref="taxon:1134687"
     Protein         1..>1944
                     /product="Ig-like domain-containing protein"
     Region          4..66
                     /region_name="biofilm_BapA_N"
                     /note="BapA prefix-like domain; NF033677"
                     /db_xref="CDD:411274"
     Region          224..1894
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          <255..525
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 mkninvtvke tgaeytvdgn qvnlntqsvv llhvkredir sytrqgndlv lklqngdtvt
       61 iknffvvdeh gqhsdlvlmd detgalwwle gagtdgahys lisdlsevia tggagqsiag
      121 wvmagaallg iaamfagtsn kdhhssvses dsdadsdsds dsdtdadsds dsdsdsdsds
      181 dsdsdsdsds dsdsdsdsds dadsdadsds dadsdsdtdt elptaaqnia vidnvgpitg
      241 vlhsgdvtdd ttpeikgtae agatitiydg dtklgsvvad engnwsftlp elsegshsls
      301 atvtdkagnv serspafelt idttapaasi pqvtdnvaeh tgqlqsgdlt ndatptlngt
      361 aeagstvtiy dgdtvlgtvv agedgrwsft pasleegahs lsttvtdkag nvserspafe
      421 ltvdtivnpv sdlqvtdnag edtgtlnsgs vtdddtptls gtaeagatit iydgdtvlgt
      481 aiadedgrws ftpdalaegs hslsttvtdl agnvserspi filtvdlsdd tdsdsdsdsd
      541 sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd
      601 sdsdsdsdsd adsdsdsdsd sdsdsdsdsd adsdsdsdsd sdsdsdsdsd sdsdsdsdsd
      661 sdsdsdsdsd sdsdsdsdad sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd
      721 sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdad sdsdsdsdsd sdsdsdadsd
      781 sdsdsdsdsd sdsdadsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdipqa nadtntalis
      841 enhdnldgvn gtitqltgvn llgvvdvsll sgnnfdftva sgttqdvald isggttlssa
      901 alintlllll ggtntfqadl avvntvtgev valasnavti taggvsldys gsasfsdlpe
      961 gnytvvissp tntgllptlv nflanlsvat avdvavtdsv gyesaiisgn vlqtdaggdv
     1021 gdtgtditvt siiatsvpga taepvssggt ivegaygtlv iyadgsytyh atgdadsvgq
     1081 tevftytitd adgdtatttl tinigladdt dsdadsdsds dsdsdsdsds dsdsdsdsds
     1141 dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds
     1201 dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds
     1261 dsdsdsdsds dsdsdsdsdi eaipdsnspd vvalegnlnn vsgtsgqlvg ltllstvdvs
     1321 llsgnnlrfs vgsgtvedmt vsvngnsllt asgllttivn llgagntlta dlsvvntatg
     1381 evvaiaensv sisasllggl syngtvsfan lpagdytmvi sapesngplv slinalaaaq
     1441 vasfvnvdvt dsvgysvgai egnvldttas gdmqdsgqgi svtsavsdsv dgstpvnvts
     1501 agvnitgayg vltihsdgsy syqltkggaa igqsdvfsyt itdeagntst tnltiniggn
     1561 iepaqanpda qetdltatfd tlngesgtvg qlvgvsllgs vnvgllngns fdfdvaagan
     1621 ekvllavsgt tglslgaals tllsllggas sftadlsivd katgevvqvl tnavninvng
     1681 lglslgysgg gwssmlpsgs ytavvsspnt ggllgalldl nlgtfvnvsv tdsegyhtds
     1741 ltgnvlqsdg dgdvadtgvn ikvtsvtats vtdadpvsvt ssgttiagaw gsltihsdgs
     1801 ytyqpyggvn svgqsevfty titdslghta sttltidids paslavndvv alnvatalat
     1861 vnvpaidtag lntsgksttg gvsasksisf svgadremdt lsvnvnytas gsvvntvriv
     1921 fdpifpdtcy hlthywyaaa dipv
//
LOCUS       WP_257966214             460 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257966214
VERSION     WP_257966214.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>460
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          248..338
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          340..430
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq plpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnaendvit teedtavtid vlvndsdveg dalsiqsasv pkeqgtvevv
      301 dgklvftpae nfngeatisy ivtdgdltde akvsvtvtpv ndspvavddt tsiqedtavt
      361 idvltndtdv dgdklsiesa svpkeqgtve vvdgklvftp aenfngdaei aytvtdgelt
      421 deakvtvtvn pvndvptikv eavesiteda vstdtvvatl
//
LOCUS       WP_257966269             200 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257966269
VERSION     WP_257966269.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 200)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 200)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 200)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 200)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>200
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          88..>179
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            119..126
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213202"
     Site            154..157
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213202"
ORIGIN      
        1 mtpgrprlsp rffpspclll tfvtfpltda dlhsffasll lcyniklrqg yvhidfygir
       61 rgargyrrra aggamvsnlv ggdaamiele qlvagydgva itpplsgmic pgsltaivgl
      121 ngcgkstllk tlagflppvs grlrwqgkrp vigwlaqrha lesqfplnvq dvvsqgawpg
      181 vsllrglggg trrrigavle
//
LOCUS       WP_257966272              28 aa            linear   BCT 02-MAR-2025
DEFINITION  HisA/HisF-related TIM barrel protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257966272
VERSION     WP_257966272.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 28)
  AUTHORS   Copley,R.R. and Bork,P.
  TITLE     Homology among (betaalpha)(8) barrels: implications for the
            evolution of metabolic pathways
  JOURNAL   J Mol Biol 303 (4), 627-641 (2000)
   PUBMED   11054297
REFERENCE   2  (residues 1 to 28)
  AUTHORS   Fani,R., Tamburini,E., Mori,E., Lazcano,A., Lio,P., Barberio,C.,
            Casalone,E., Cavalieri,D., Perito,B. and Polsinelli,M.
  TITLE     Paralogous histidine biosynthetic genes: evolutionary analysis of
            the Saccharomyces cerevisiae HIS6 and HIS7 genes
  JOURNAL   Gene 197 (1-2), 9-17 (1997)
   PUBMED   9332345
REFERENCE   3  (residues 1 to 28)
  AUTHORS   Fani,R., Lio,P., Chiarelli,I. and Bazzicalupo,M.
  TITLE     The evolution of the histidine biosynthetic genes in prokaryotes: a
            common ancestor for the hisA and hisF genes
  JOURNAL   J Mol Evol 38 (5), 489-495 (1994)
   PUBMED   8028028
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013168.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00977.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..28
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>28
                     /product="HisA/HisF-related TIM barrel protein"
                     /GO_process="GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
     Region          1..>28
                     /region_name="TIM-like beta/alpha barrel domains"
                     /note="A large family of domains similar to triose
                     phosphate isomerase (TIM) which, in general, share an
                     eight beta/alpha closed barrel structure; cl21457"
                     /db_xref="CDD:473867"
ORIGIN      
        1 miipaldlid gtvvrlhqgd ygqqrdyg
//
LOCUS       WP_257966321             112 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257966321
VERSION     WP_257966321.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 112)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..112
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <1..110
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 pwdlaqhrci nlrlptrggl yawefardgr eiqvrvegql ilnslpqrid aaeaglglay
       61 vpddcvaeal asgrlvrvla ewtpafpgyh lyypsrrqht saftllletl rr
//
LOCUS       WP_257966303             212 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257966303
VERSION     WP_257966303.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 212)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>212
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
     Region          1..>212
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 manqtiqssa laddeidlgk lfgilidakw fiisitlffa tlgiavalls tpiykadali
       61 qiekkssggi samvgdmgel fsaessatte ieiiksrmil gdtvdkfnlt tiatpdylpf
      121 vgkglaring tqnyislttf evprtargls hqliatdiek gqfslmledq mvlsgsvgql
      181 iemngyrvkv nqlnaqnedt ftiskiskld ai
//
LOCUS       WP_257966330             171 aa            linear   BCT 02-MAR-2025
DEFINITION  MATE family efflux transporter, partial [Klebsiella pneumoniae].
ACCESSION   WP_257966330
VERSION     WP_257966330.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01554.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>171
                     /product="MATE family efflux transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          1..>171
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 mnvtsavrqa vertswfkkr qryrvlywre isplavpill enacvllmgv lstflvswlg
       61 keamagvgla dsfnmvimsf faaidlgttv vvafslgkrd rrraraaarq slaimtlfsi
      121 llagvihafg qeiidfvagd ataqvkdlal tyleltalsy paaaialigs g
//
LOCUS       WP_257966353              74 aa            linear   BCT 02-MAR-2025
DEFINITION  deaminase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257966353
VERSION     WP_257966353.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 74)
  AUTHORS   Iyer,L.M., Zhang,D., Rogozin,I.B. and Aravind,L.
  TITLE     Evolution of the deaminase fold and multiple origins of eukaryotic
            editing and mutagenic nucleic acid deaminases from bacterial toxin
            systems
  JOURNAL   Nucleic Acids Res 39 (22), 9473-9497 (2011)
   PUBMED   21890906
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025793.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14437.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>74
                     /product="deaminase"
                     /GO_function="GO:0008251 - tRNA-specific adenosine
                     deaminase activity [Evidence IEA]"
                     /GO_process="GO:0002100 - tRNA wobble adenosine to inosine
                     editing [Evidence IEA]"
     Region          3..>74
                     /region_name="RibD1"
                     /note="Riboflavin biosynthesis protein RibD, pyrimidine
                     deaminase domain [Coenzyme transport and metabolism];
                     COG0117"
                     /db_xref="CDD:439887"
ORIGIN      
        1 meeyymntai elarrgegqt qpnplvgavv vkngqivgmg ahlqygeaha evhainmags
       61 hakgadlyvt lepc
//
LOCUS       WP_257966343             598 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257966343
VERSION     WP_257966343.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 598)
  AUTHORS   Clarke,T.A., Edwards,M.J., Gates,A.J., Hall,A., White,G.F.,
            Bradley,J., Reardon,C.L., Shi,L., Beliaev,A.S., Marshall,M.J.,
            Wang,Z., Watmough,N.J., Fredrickson,J.K., Zachara,J.M., Butt,J.N.
            and Richardson,D.J.
  TITLE     Structure of a bacterial cell surface decaheme electron conduit
  JOURNAL   Proc Natl Acad Sci U S A 108 (23), 9384-9389 (2011)
   PUBMED   21606337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037016.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17963.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..598
                     /product="Ig-like domain-containing protein"
     Region          54..285
                     /region_name="Peptidase_M11"
                     /note="Gametolysin peptidase M11; cl21618"
                     /db_xref="CDD:354892"
     Region          336..>542
                     /region_name="COG1470"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:441079"
     Region          497..570
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
ORIGIN      
        1 dklrmnkhal nkgiffllvl flflqniqya kaagssigqq dtlvmllnfk enpndrpits
       61 eeahalvfge vndfyqensy gktwlsgqva gwytlpvsnq vcdypsvqae adkmaradgv
      121 vledyqriiy imtqsgcagg gsattgktfp srayidgtls arviahefgh nlglshakal
      181 dcgdasvsnn csvieygdsy dvmgtpdmgy intyykermg wlndaespni ltatqdglye
      241 iaeyetqdit qnialkiprg vnpntglkew fyveyrqamg ydqflddrsy mlfrgdvtdg
      301 vivrlveega eesyilhmkp nsdysqvygr kdwkdtalpv gdsftdpvsg ltinlasaan
      361 gfagvnvsfg gsvtpsvcem sapsvsvkat sdtqvkagdt veyqltvtnt andvcgtirf
      421 dvsaqlesgw qassqsislv sgessvatia vtsalsatsg dypvtfnvvn tkdeaynvat
      481 qatyavaeqq mgsgdvvavd dnvqmskvst vsinvlgndi iadgvsveis amsapskgtv
      541 kllsdgsiqy tpakrfknqd sfsytitsgn vtstamvtva lqsspdsggs spgkgknk
//
LOCUS       WP_257966405             131 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257966405
VERSION     WP_257966405.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 131)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>131
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>131
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 mskekfertk phvnvgtigh vdhgkttlta aicttlakvy ggeakdfasi dnapeererg
       61 itiatshvey dtpsrhyahv dcpghadyvk nmitgaaqmd ggilvvaatd gsmpqtrehi
      121 llgrqvgipy i
//
LOCUS       WP_257966422             367 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase [Lactobacillus crispatus].
ACCESSION   WP_257966422
VERSION     WP_257966422.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus crispatus
  ORGANISM  Lactobacillus crispatus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012371.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00144.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Lactobacillus crispatus"
                     /db_xref="taxon:47770"
     Protein         1..367
                     /product="serine hydrolase"
                     /calculated_mol_wt=41289
     Region          168..>362
                     /region_name="Transpeptidase"
                     /note="Penicillin binding protein transpeptidase domain;
                     cl21491"
                     /db_xref="CDD:473882"
ORIGIN      
        1 mavsnlisli eerrhimnsk klitgsctva lsvmmlastv tyapisnsqv yasvvkqkqe
       61 ptgqyqinds fpidekndnp kfdtwslldn inrkfygfkg qgsvwvhsnn aknfelying
      121 knvslkniss nkwvkidisk ftkngnnalq ispkkgvras dkfdiklpyp tlvdktkeyr
      181 nndtfktmda linseikngf psaelvvvhn gqiikrsayg rvnayfqngk rrvnapkvtn
      241 ttmydlasnt kmwatnmaiq klvsekklni dakvssifpd fkdnandkik gktdltvrdi
      301 lmhqagfpad pqyhnnnynp dkpnerkkna npvytqnrde vlkkiiatpl qyapgtktiy
      361 sdtrgas
//
LOCUS       WP_257966478             254 aa            linear   BCT 02-MAR-2025
DEFINITION  lyase family protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257966478
VERSION     WP_257966478.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00206.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..254
                     /product="lyase family protein"
     Region          <1..248
                     /region_name="PRK09053"
                     /note="3-carboxy-cis,cis-muconate cycloisomerase;
                     Provisional"
                     /db_xref="CDD:181627"
ORIGIN      
        1 ldalkekgpa vglalaqilg lslpdtpwhs qrdrlleaga wfagvcgtlg kfandfsllm
       61 qtevaevgep vaegrggsst mphkrnpvac aailtaaqrt pglmatlyas qlqqheralg
      121 gwqaewetlp elitlvggal aqsealvrdm qvfpqkmrad ldithglima eavtlalaef
      181 igkaeahhhi ealcrqaldr hcplvdllaa dpqvsqylsr erlttlldpa tatgsaerfv
      241 rqvlaryqeq rdes
//
LOCUS       WP_257966550             347 aa            linear   BCT 02-MAR-2025
DEFINITION  thymidylate synthase [Vibrio parahaemolyticus].
ACCESSION   WP_257966550
VERSION     WP_257966550.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 347)
  AUTHORS   Leduc,D., Escartin,F., Nijhout,H.F., Reed,M.C., Liebl,U.,
            Skouloubris,S. and Myllykallio,H.
  TITLE     Flavin-dependent thymidylate synthase ThyX activity: implications
            for the folate cycle in bacteria
  JOURNAL   J Bacteriol 189 (23), 8537-8545 (2007)
   PUBMED   17890305
REFERENCE   2  (residues 1 to 347)
  AUTHORS   Leduc,D., Graziani,S., Meslet-Cladiere,L., Sodolescu,A., Liebl,U.
            and Myllykallio,H.
  TITLE     Two distinct pathways for thymidylate (dTMP) synthesis in
            (hyper)thermophilic Bacteria and Archaea
  JOURNAL   Biochem Soc Trans 32 (Pt 2), 231-235 (2004)
   PUBMED   15046578
REFERENCE   3  (residues 1 to 347)
  AUTHORS   Myllykallio,H., Lipowski,G., Leduc,D., Filee,J., Forterre,P. and
            Liebl,U.
  TITLE     An alternative flavin-dependent mechanism for thymidylate synthesis
  JOURNAL   Science 297 (5578), 105-107 (2002)
   PUBMED   12029065
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012524.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00303.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..347
                     /product="thymidylate synthase"
                     /calculated_mol_wt=40136
     Region          44..257
                     /region_name="TS_Pyrimidine_HMase"
                     /note="Thymidylate synthase and pyrimidine
                     hydroxymethylase: Thymidylate synthase (TS) and
                     deoxycytidylate hydroxymethylase (dCMP-HMase) are homologs
                     that catalyze analogous alkylation of C5 of pyrimidine
                     nucleotides. Both enzymes are involved in the...; cl19097"
                     /db_xref="CDD:473135"
ORIGIN      
        1 mkilekvlte gtclstrngd altiydasli lhnprsrhls llgrknnifs tfaeamwvla
       61 gdnriepylk fflprapkys ddgvvwraay gerlyahgql envinqfkkd giftrravls
      121 lympdrdtde slknvynlqn svdipcnnli hffvtpdkkl nikiiqrsgd lifgisnini
      181 fefsllqeiv vsvlqnevds eikvgylhqs vtnlhiykkr ieqakdiynn keeqqtkiln
      241 ndeikfpnsl pkikslfidi veffntlite shnkeripee vkilegifek ycvekeknll
      301 wgyaeavlsy ihqekfnqpi vikngfsddf nlsissnyfn ktnkeni
//
LOCUS       WP_257966798             444 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257966798
VERSION     WP_257966798.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>444
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          248..338
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          340..430
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq plpgevivts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd teasftfdii ddedlvvsgs
      241 anldilpind apnaendvit teedtavtid vlvndsdveg dalsiqsasv pseqgsvdiv
      301 dgklvftpae nfngeatity ivtdgdltde akvtvtvtpv ndspvavddt tsiqedtavt
      361 idvlpndsdv dgdklsiqsa svpeaqgkve ivegklvftp aenfngdaei tytvtdgqlt
      421 deakvtvtvn pvndapiikv dave
//
LOCUS       WP_257966864             151 aa            linear   BCT 02-MAR-2025
DEFINITION  phospholipase D-like domain-containing protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257966864
VERSION     WP_257966864.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13091.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>151
                     /product="phospholipase D-like domain-containing protein"
     Region          2..>151
                     /region_name="PRK11263"
                     /note="cardiolipin synthase ClsB"
                     /db_xref="CDD:236888"
ORIGIN      
        1 mkcrwqegnr itllengdqy ypalfaaigr asrrvilesf iwfedevgrr lhavlleaar
       61 rgiqvevlld gygspdlsde fvgeltaagv ifryydprpk lmgmrtnlfr rmhrkivvid
      121 dttafvggin ysaehmsdyg peakqdyavq v
//
LOCUS       WP_257966962            1358 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6701 domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257966962
VERSION     WP_257966962.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042738.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20419.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1358
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..1358
                     /product="DUF6701 domain-containing protein"
                     /calculated_mol_wt=146254
     Region          146..>235
                     /region_name="CcmA"
                     /note="Cytoskeletal protein CcmA, bactofilin family
                     [Cytoskeleton]; COG1664"
                     /db_xref="CDD:441270"
     Region          207..276
                     /region_name="Bactofilin"
                     /note="Polymer-forming cytoskeletal; pfam04519"
                     /db_xref="CDD:461340"
     Region          403..652
                     /region_name="lectin_L-type"
                     /note="legume lectins; cl14058"
                     /db_xref="CDD:472686"
     Site            order(472,637)
                     /site_type="other"
                     /note="carbohydrate binding site [chemical binding]"
                     /db_xref="CDD:173886"
     Site            order(513,515,541)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:173886"
     Region          767..1353
                     /region_name="DUF6701"
                     /note="Family of unknown function (DUF6701); pfam20419"
                     /db_xref="CDD:466568"
ORIGIN      
        1 mkrkiiaalf fglfslksfs aetfdltpyw siskgamksr gnlcggwydl tgnyicpngl
       61 slnngqsvva thdvnihvyg gvelkgnnei gdpvnsinif sknsdvkgqn dieifghves
      121 fgavdlkndi eihglisvsh gkvyledahi kgsvtsesdt veikgntnli egniwgakdi
      181 vlskvtvkgg vtssagqikt evnsniiegd vvahgdvvlk htvvrgdvts kggavktenl
      241 nnqvygdiea lhevvlkgtk vvgdiqslge eikleeaggg nsvygnlial hqveikkslv
      301 cgqvtsrgse vklenskenk nrgiyaytna iqashkatvk nssvcgsvvg hsydfdneki
      361 ycgvndpsct psdtdgtcpi dviqsacpdm tpeptqckll pmedfnandi snwsvigfgq
      421 sikpkpsggr fvlnssqknq atasaynylf pskdnyleve fdhyahsgsg adgvalvlsd
      481 anvppqtgaf ggplgygvkp niqgfaggwl gfgideygny sregsfedsd yrpgfkpntv
      541 airgsgiknd sghwmggyly ikgnhnvgdl dgrnnqkhry kviidskqqg kvyitiqrki
      601 gsvnswitli skfdvmrgfg qttppenfrv sitastgdit nihemdnfqv cadkyqkite
      661 gihhfefdya gtgsicqase vtlracmnds csktypasvl ssnpgasidp vtvsllpqss
      721 svvkweggds vtfsdsislk lqayqsgsak lgiasssvpq fgfegakcri aggalseqnc
      781 nilfnsaalg vnipdkvagk pfftdgtply gienspylef csapsqqdga gehrdvifsv
      841 ervepeknav qvetyvsflk edgkfseeva idnkaskeid dvyfdskgka yfnlrypeag
      901 kvalkakikg ekdslgqnsf vsfpaylqlt vdgglcgasd scdksfvaag epftmkvtay
      961 qfgddkkpaq nyqqsgltvs hkvtypaada avsgtlgtta ydhlnltkgt gsfeqtisev
     1021 gafeftitpp etylgsksfa itpakevigr fypkyfride vknnqwaypn gqsftymeqa
     1081 fgakefyvea lnadkgavtn yaffsdglha rfglkdtssy earfssnkty sgtwlnngta
     1141 yvtsrslgkf agsttdglvf skgsgasypd gplnlyenak dttisikgis ansdpvsidg
     1201 ndgvlttqpd irfgrvdldd vggnqgstlh vplrveywng srfianpndn qtevtgvkaa
     1261 qqpiwptdqs akdvtlgegg ivtsgssrsv tatqaepyrq qtrvwldldd sanglpwlky
     1321 nwdnknagee npssvvtfgi hrgndrviyr gepgltgq
//
LOCUS       WP_257967014             231 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA adenine methylase [Brachyspira pilosicoli].
ACCESSION   WP_257967014
VERSION     WP_257967014.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira pilosicoli
  ORGANISM  Brachyspira pilosicoli
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014177.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02086.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Brachyspira pilosicoli"
                     /db_xref="taxon:52584"
     Protein         1..231
                     /product="DNA adenine methylase"
                     /GO_function="GO:0009007 - site-specific
                     DNA-methyltransferase (adenine-specific) activity
                     [Evidence IEA]"
                     /GO_process="GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /calculated_mol_wt=27570
     Region          2..190
                     /region_name="Dam"
                     /note="DNA-adenine methylase [Replication, recombination
                     and repair]; COG0338"
                     /db_xref="CDD:440107"
ORIGIN      
        1 mgsknriake ilpiilehkn nvrfyiepfv gganvidkid kslnrigfdl npyliallqa
       61 lqndnwiypk eydneyykyv rdnkdkfdka vvgfigfncy garffegfcr dglgkrnyyi
      121 eycnnldkqr gnlkniefic sdykniifpd epciiycdpp yfntkkykyn nidynefwdw
      181 crelskkhfi yissfeaped fkciwqkerc isltkdtssk knierlfike c
//
LOCUS       WP_257967024             119 aa            linear   BCT 02-MAR-2025
DEFINITION  MATE family efflux transporter, partial [Klebsiella pneumoniae].
ACCESSION   WP_257967024
VERSION     WP_257967024.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01554.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>119
                     /product="MATE family efflux transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          1..>119
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 mnvtsavrqa vertswfkkr qryrvlywre isplavpill enacvllmgv lstflvswlg
       61 keamagvgla dsfnmvimsf faaidlgttv vvafslgkrd rrraraaarq slaimtlfs
//
LOCUS       WP_257967029              30 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6392 family protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257967029
VERSION     WP_257967029.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040077.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19929.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..30
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>30
                     /product="DUF6392 family protein"
     Region          1..>30
                     /region_name="DUF6392"
                     /note="Family of unknown function (DUF6392); pfam19929"
                     /db_xref="CDD:437761"
ORIGIN      
        1 mslnveklik nlgksyldiy eqglipyktk
//
LOCUS       WP_257967046             203 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257967046
VERSION     WP_257967046.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 203)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>203
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          3..>203
                     /region_name="PRK07064"
                     /note="thiamine pyrophosphate-binding protein"
                     /db_xref="CDD:180820"
ORIGIN      
        1 msemitvgda iartleqyhv eaiygvisih nlpiadavgq rekirfvpar geagsvtmad
       61 ahgrfsglgv altstgagag navgalveam nagtpllhlt gqvekawlda dtgfihetrd
      121 qltflkassk rayrisnanq availhkaiq eaqtppcgpv sveipidiqs akiplsllta
      181 plkrapavep easlvdalwa qlk
//
LOCUS       WP_257967066             191 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY-family carbohydrate kinase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257967066
VERSION     WP_257967066.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 191)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 191)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02782.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..191
                     /product="FGGY-family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <1..190
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 aagvplpvwl adrvltqvas pseavtlaag lhvvpeflgn rapladphak aliaglgmer
       61 dldnltalyv aglcgigygl rqiidaqrac giesenivis ggagqhplvr qlladacgvs
      121 vvstasrepv llgsailgav agrvaaslpe amkqftqvda tyhsetafsp lhqrryaayk
      181 alqqagrlir e
//
LOCUS       WP_257967069             896 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Vibrio parahaemolyticus].
ACCESSION   WP_257967069
VERSION     WP_257967069.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 896)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 896)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019348.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07728.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..896
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..896
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=103085
     Region          <331..777
                     /region_name="McrB"
                     /note="5-methylcytosine-specific restriction endonuclease
                     McrBC, GTP-binding regulatory subunit McrB [Defense
                     mechanisms]; COG1401"
                     /db_xref="CDD:441011"
     Region          466..617
                     /region_name="COG4127"
                     /note="Predicted restriction endonuclease, Mrr-cat
                     superfamily [General function prediction only]"
                     /db_xref="CDD:443303"
ORIGIN      
        1 mkveqqmlwd eflsrwpren lsnltleeyv svndtdtfty wletktrelg siqgntsakf
       61 giykrgsegk eqsgighgei ytwrtrygss esevfdyvkk aliqisnaaf kgdletidai
      121 dfaplvkwki aflyqnqasp vlintfskpm levltgntrk vsfpemyqql iaekgsknll
      181 efgeqcwkqa eskrkeieqr hifeqfshie qfnrcaelwt qetidafcsl iqaahsnkld
      241 ifttametga mirigrkeqh airaeevfat feptqkkinf elryehrdty dcsevsddly
      301 rqlrkskqlk kftqqypiar kpywpanyls ddyiddipde sgvaeqgety qmgnltplnq
      361 ilygppgtgk tyhtieaavk aaepsyswds reelkaeydr lisekrirfv tfhqsygyee
      421 fveglravsn qdnqieypiq sgifkqicqd atasainqpa tlkpsakiwk lsidgvkssr
      481 vrdycfannl aaigwgntgd msseertaee qdyfeslgal akssimefsn rmaegdivvc
      541 vkgqwsiqav gvvsgdyqfr eegvedrsdf chvmpvdwla tgldvnlyel ndntrltlkt
      601 cyeltrftsi elyevleksg vklknysqad snpekhrnkq nyvlvidefn rgniskvfge
      661 litliepskr kgqaealelt lpysgkpfsv pdnlyiigtm ntadrslamm dtalrrrfdf
      721 iemmpkphll egvvvkgidl qrlldvmnqr ieilydreht lghaffmpvk alveqdkqvl
      781 afselqsvfq nkiiplleey ffedwskirl vladnqksqe iqfikehiqt nqdlnalfgv
      841 khnldqygqs vvkytladka devwcdsdsy isiyskvskt sdedqefkts remvte
//
LOCUS       WP_257967090             184 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257967090
VERSION     WP_257967090.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 184)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>184
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          1..>184
                     /region_name="PRK09124"
                     /note="ubiquinone-dependent pyruvate dehydrogenase"
                     /db_xref="CDD:181661"
ORIGIN      
        1 mkqtvaayia ktleqagvkr iwgvtgdsln glsdslnrmg tidwmptrhe evaafaagae
       61 aqltgelavc agscgpgnlh linglfdchr nhvpvlaiaa hipsseigsg yfqethpqel
      121 frecshycel vstpeqipqv lavamrkavi nrgvsvvvlp gdvalkaape sasshwyhap
      181 lptv
//
LOCUS       WP_257967096             243 aa            linear   BCT 02-MAR-2025
DEFINITION  RES domain-containing protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257967096
VERSION     WP_257967096.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020387.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08808.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..243
                     /product="RES domain-containing protein"
ORIGIN      
        1 gegssyyrar ymgndaspid hvskilcppk eirsygrids deneilytas skntalnelk
       61 nynnsfnyyt iatfriynsi kvlpigelsh tqvtgrgmll gnqsqsinkl inacnpdevt
      121 rllitdkfls dslmsdnyni tsyvancife knsdiyviay pskqypggin faiknkviwd
      181 hlginavrya qirhlacgyf eerntrhvkg itqrgkliwd enhaddeyyt ypleplwtpg
      241 qsi
//
LOCUS       WP_257967176             238 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY-family carbohydrate kinase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257967176
VERSION     WP_257967176.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 238)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 238)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02782.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..238
                     /product="FGGY-family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <1..229
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 gdafislgts gvlfvvtday rpapqsavha fchvlpnlwh qmsvmlsaas clqwfcrltg
       61 ttevallaei aelseedkan apfflpylsg ertphndpda rgifwgmtha slraqlgyav
      121 legvsfgind glqalkesgt pitqcslvgg garspfwaql ladilampvv thkggetgga
      181 lgaarlacla agkpiaavce kpevwqtwrv dpvrhhtlmq ryaqfkalyl ndlhyrqh
//
LOCUS       WP_257967192             161 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257967192
VERSION     WP_257967192.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024831.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13439.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>161
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
     Region          3..>149
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mtivvntrnl lghttgvqry tssildywse sdyeriepsd slncsgmkgh lweqlniprk
       61 inknnilwsp antgpvavkn qiitihdtvp fdhpewmsrk ftawykfmqp iiarkalhii
      121 tvshfskeri ienfniaeek vsviynginl rsvdetpind k
//
LOCUS       WP_257967197             122 aa            linear   BCT 02-MAR-2025
DEFINITION  HisA/HisF-related TIM barrel protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257967197
VERSION     WP_257967197.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 122)
  AUTHORS   Copley,R.R. and Bork,P.
  TITLE     Homology among (betaalpha)(8) barrels: implications for the
            evolution of metabolic pathways
  JOURNAL   J Mol Biol 303 (4), 627-641 (2000)
   PUBMED   11054297
REFERENCE   2  (residues 1 to 122)
  AUTHORS   Fani,R., Tamburini,E., Mori,E., Lazcano,A., Lio,P., Barberio,C.,
            Casalone,E., Cavalieri,D., Perito,B. and Polsinelli,M.
  TITLE     Paralogous histidine biosynthetic genes: evolutionary analysis of
            the Saccharomyces cerevisiae HIS6 and HIS7 genes
  JOURNAL   Gene 197 (1-2), 9-17 (1997)
   PUBMED   9332345
REFERENCE   3  (residues 1 to 122)
  AUTHORS   Fani,R., Lio,P., Chiarelli,I. and Bazzicalupo,M.
  TITLE     The evolution of the histidine biosynthetic genes in prokaryotes: a
            common ancestor for the hisA and hisF genes
  JOURNAL   J Mol Evol 38 (5), 489-495 (1994)
   PUBMED   8028028
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013168.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00977.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..122
                     /product="HisA/HisF-related TIM barrel protein"
                     /GO_process="GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
     Region          <2..120
                     /region_name="TIM-like beta/alpha barrel domains"
                     /note="A large family of domains similar to triose
                     phosphate isomerase (TIM) which, in general, share an
                     eight beta/alpha closed barrel structure; cl21457"
                     /db_xref="CDD:473867"
     Site            order(72..73,95..96)
                     /site_type="other"
                     /note="phosphate binding site [ion binding]"
                     /db_xref="CDD:240073"
ORIGIN      
        1 tgkyhvnqyt gdesrtrvtq wetldwveev qkrgageivl nmmnqdgvrn gydlqqlakv
       61 ravchvplia sggagtmehf leafrdadvd galaasvfhk qiinigelka ylaaqgveir
      121 vc
//
LOCUS       WP_257967265             146 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar phosphate nucleotidyltransferase, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257967265
VERSION     WP_257967265.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 146)
  AUTHORS   Jensen,S.O. and Reeves,P.R.
  TITLE     Domain organisation in phosphomannose isomerases (types I and II)
  JOURNAL   Biochim Biophys Acta 1382 (1), 5-7 (1998)
   PUBMED   9507048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012695.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00483.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>146
                     /product="sugar phosphate nucleotidyltransferase"
                     /GO_function="GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <2..>146
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
ORIGIN      
        1 mfkvdsfvek pklelaekyv esgeyywnsg mfmfkaskyl delkryrpei yqsckrslek
       61 vqedcdfirv dqdefkncpd dsidyavmen tnnatvipvs vgwsdigsws alwdksfkdd
      121 nqnvqsgdii svesygnylr sesklv
//
LOCUS       WP_257967282              91 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257967282
VERSION     WP_257967282.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 91)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>91
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <1..91
                     /region_name="PRK10094"
                     /note="HTH-type transcriptional activator AllS"
                     /db_xref="CDD:182237"
ORIGIN      
        1 sarrltkrva wrlpgqkeiv vpdietkvaa hlagvgigfl peplclplia qgkliarhip
       61 tmrppsplsl awskdhhgka vqdiaslfsh s
//
LOCUS       WP_257967376             463 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257967376
VERSION     WP_257967376.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>463
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          248..338
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          340..430
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq plpgevvvts tdvdpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvnl daieedggsi iitteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnaendvit teedtavtid vlvndsdveg dalsiqsasv pseqgsvdiv
      301 dgklvftpae nfngeatity ivtdgdltde akvtvtvtpv ndspvavddt tsiqedtavt
      361 idvltndtdv dgdklsiesa svpkeqgtve vvdgklvftp aenfngdaei tytvtdgelt
      421 deakvtvtvn pvndaptikv eavesiteda vstdtvvatl tvr
//
LOCUS       WP_257967428             171 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5666 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257967428
VERSION     WP_257967428.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039822.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18914.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..171
                     /product="DUF5666 domain-containing protein"
ORIGIN      
        1 ieepyrnltn yrevkgriss inqkeqtfni gsdffiyygs aietpingpl lgqwvevkge
       61 vrggtfyavq vetldlgsel gnqqqykgfe cegiasnydd inhtftvtsc knglsliinn
      121 svyidekthf edltpwqing lnvsvkgaii dkkniakdvk rniirifpsp k
//
LOCUS       WP_257967450             190 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257967450
VERSION     WP_257967450.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 190)
  AUTHORS   Mande,S.S., Sarfaty,S., Allen,M.D., Perham,R.N. and Hol,W.G.
  TITLE     Protein-protein interactions in the pyruvate dehydrogenase
            multienzyme complex: dihydrolipoamide dehydrogenase complexed with
            the binding domain of dihydrolipoamide acetyltransferase
  JOURNAL   Structure 4 (3), 277-286 (1996)
   PUBMED   8805537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07992.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>190
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
     Region          3..>190
                     /region_name="Pyr_redox_2"
                     /note="Pyridine nucleotide-disulphide oxidoreductase;
                     cl39093"
                     /db_xref="CDD:476868"
ORIGIN      
        1 mahvnhydvi vigsgpggeg aamgltkagl nvaivekess vgggcthwgt ipskalrhav
       61 sriiefnsnp lfcrnntslh atfsdilgha ktvidkqtrl rqgfydrndc tllfgtarfi
      121 dthsiavmqn dgteetysad kfviatdsrp yrpndvdflh eriydsdsil slkhdprhii
      181 iygagvigce
//
LOCUS       WP_257967446             515 aa            linear   BCT 02-MAR-2025
DEFINITION  TOTE conflict system archaeo-eukaryotic primase domain-containing
            protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257967446
VERSION     WP_257967446.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 515)
  AUTHORS   Aravind,L., Iyer,L.M. and Burroughs,A.M.
  TITLE     Discovering Biological Conflict Systems Through Genome Analysis:
            Evolutionary Principles and Biochemical Novelty
  JOURNAL   Annu Rev Biomed Data Sci 5, 367-391 (2022)
   PUBMED   35609893
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047202.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22548.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..515
                     /product="TOTE conflict system archaeo-eukaryotic primase
                     domain-containing protein"
     Region          1..>510
                     /region_name="COG4951"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:443978"
ORIGIN      
        1 elklelaqle gkklkllatk gtvssacnnv mppeqkvelf qryfrgntnc yavrwqnkqg
       61 rsgysiachn ewqqglcnkp kikclecpnq sfklldknav ydhlsgksvv giypmdsedq
      121 cwflavdfdk kdwqatslay aeackrngid fllersrsgn gahvwiffeq kidaaivrkl
      181 gfllldqamq ihgtlsfesy drlfpnqdyl pvvgignlia lplqkasrsq gntefvdttf
      241 taykdqwqvl astkklavta leklaatynf keapnretls lapwernlpe iasisgcpes
      301 ievvlanriy ipiesapnal varlkklasf snpkffkaqg lrlstngipr yislaeidsg
      361 ylvlprgcid dvcelleqsn iklllvdkrr tgvslkdisf ngelrieqkk svdavskfdi
      421 gvlhaptafg ktvtaigllc krkvntlilv hnkqlieqwq erlkafttnv digvitgsrk
      481 kptksvdvat yqsllnrsdn tanpvvheyg qsccp
//
LOCUS       WP_257967466             545 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257967466
VERSION     WP_257967466.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>545
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          <202..540
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq plpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnakndvit teedtavtid vlvndsdveg dvlsiqsasv pseqgsvdiv
      301 dgklvftpae nfngeatity ivtdgdltde anmtvtvtpv ndspvavddt vstqedtavt
      361 idvltndtdv dgdklsiesa svpkeqgtve vvdgklvftp tenfngdaei tytvtdgqlt
      421 deakvtvtvn qvndapiikv davesiteda vstdtvvatl tvrdtdtped qltvslenns
      481 ngyfvlvgde vkltqagvda vnndelnlkd ltisasvsdg vnptasdsds livnrvndap
      541 tvena
//
LOCUS       WP_257967472             260 aa            linear   BCT 02-MAR-2025
DEFINITION  rhodanese-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257967472
VERSION     WP_257967472.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 260)
  AUTHORS   Gliubich,F., Gazerro,M., Zanotti,G., Delbono,S., Bombieri,G. and
            Berni,R.
  TITLE     Active site structural features for chemically modified forms of
            rhodanese
  JOURNAL   J Biol Chem 271 (35), 21054-21061 (1996)
   PUBMED   8702871
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00581.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>260
                     /product="rhodanese-like domain-containing protein"
     Region          <1..185
                     /region_name="Pyr_redox_2"
                     /note="Pyridine nucleotide-disulphide oxidoreductase;
                     cl39093"
                     /db_xref="CDD:476868"
     Region          191..>260
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            248
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238089"
ORIGIN      
        1 iytneymqts dpsiyavgda veekdfvtge qtlvplagpa nrqgrmaadn mlgrketyqg
       61 tqgtaickif dlavastgkn ekqlkhagve yekvyvhtas hasyypgaev vsfkmlfdpk
      121 sgkifgaqav gkdgidkrid vmavaqragm tvdqlqhlel tyappygsak dvinqaafva
      181 nniikgdata ihydeidkls enqvlldvrn pgelesvgyl egainipvdq lrhrmnelpk
      241 dkeiviycqv glrgnvayrq
//
LOCUS       WP_257967484              94 aa            linear   BCT 02-MAR-2025
DEFINITION  lipopolysaccharide assembly protein LapA domain-containing protein
            [Vibrio parahaemolyticus].
ACCESSION   WP_257967484
VERSION     WP_257967484.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 94)
  AUTHORS   Klein,G., Kobylak,N., Lindner,B., Stupak,A. and Raina,S.
  TITLE     Assembly of lipopolysaccharide in Escherichia coli requires the
            essential LapB heat shock protein
  JOURNAL   J Biol Chem 289 (21), 14829-14853 (2014)
   PUBMED   24722986
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018058.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06305.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..94
                     /product="lipopolysaccharide assembly protein LapA
                     domain-containing protein"
                     /GO_component="GO:0005886 - plasma membrane [Evidence
                     IEA]"
                     /calculated_mol_wt=10297
     Region          <17..>67
                     /region_name="LapA_dom"
                     /note="Lipopolysaccharide assembly protein A domain;
                     cl01539"
                     /db_xref="CDD:470244"
ORIGIN      
        1 mkivavlvlf lvalalgsqn qelvtfnyll akgefhlstl lgvvfvvgfa aawvifasiq
       61 lktqlqvrrl kkklkkyepa eaektakpai ekqa
//
LOCUS       WP_257967522              77 aa            linear   BCT 02-MAR-2025
DEFINITION  AHH domain-containing protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257967522
VERSION     WP_257967522.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 77)
  AUTHORS   Zhang,D., Iyer,L.M. and Aravind,L.
  TITLE     A novel immunity system for bacterial nucleic acid degrading toxins
            and its recruitment in various eukaryotic and DNA viral systems
  JOURNAL   Nucleic Acids Res 39 (11), 4532-4552 (2011)
   PUBMED   21306995
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025769.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14412.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>77
                     /product="AHH domain-containing protein"
ORIGIN      
        1 mhmhrigina pqngvwlmny aknvdlnwes pdspahrsih tynyeswias kfsltplnkq
       61 lfeasllqvk nhlkkgt
//
LOCUS       WP_257967537             103 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257967537
VERSION     WP_257967537.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 103)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>103
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>103
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 skekfertkp hvnvgtighv dhgkttltaa icttlakvyg geakdfasid napeerergi
       61 tiatshveyd tpsrhyahvd cpghadyvkn mitgaaqmdg gil
//
LOCUS       WP_257967575              96 aa            linear   BCT 02-MAR-2025
DEFINITION  barstar family protein [Vibrio parahaemolyticus].
ACCESSION   WP_257967575
VERSION     WP_257967575.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 96)
  AUTHORS   Buckle,A.M., Schreiber,G. and Fersht,A.R.
  TITLE     Protein-protein recognition: crystal structural analysis of a
            barnase-barstar complex at 2.0-A resolution
  JOURNAL   Biochemistry 33 (30), 8878-8889 (1994)
   PUBMED   8043575
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013500.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01337.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..96
                     /product="barstar family protein"
                     /calculated_mol_wt=10718
     Region          2..78
                     /region_name="BarS"
                     /note="Barstar, RNAse (barnase) inhibitor [Transcription];
                     COG2732"
                     /db_xref="CDD:442038"
ORIGIN      
        1 meifidwksi mspedfyrlf lpqvkapdwh gnnldalnds lvnggingie ppykivnvnt
       61 geasdcihef mrsvigifid tsikhsgsei iikqrt
//
LOCUS       WP_257967579             128 aa            linear   BCT 02-MAR-2025
DEFINITION  EF-Tu/IF-2/RF-3 family GTPase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257967579
VERSION     WP_257967579.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 128)
  AUTHORS   Nissen,P., Kjeldgaard,M., Thirup,S., Polekhina,G., Reshetnikova,L.,
            Clark,B.F. and Nyborg,J.
  TITLE     Crystal structure of the ternary complex of Phe-tRNAPhe, EF-Tu, and
            a GTP analog
  JOURNAL   Science 270 (5241), 1464-1472 (1995)
   PUBMED   7491491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03144.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>128
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          <14..>128
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 ddeellelve mevrellsey dfpgddlpvi qgsalgalng eeqweakive laealdtyip
       61 eperavdqpf lmpiedvfsi qgrgtvvtgr iergiltvgd evaivgikdt ttttctgvem
      121 frklldeg
//
LOCUS       WP_257967580              47 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257967580
VERSION     WP_257967580.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 47)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..47
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>47
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>47
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 mskekfertk phvnvgtigh vdhgkttlta aicttlakvy ggeakdf
//
LOCUS       WP_257967597              40 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3693 domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257967597
VERSION     WP_257967597.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023888.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12472.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..40
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..40
                     /product="DUF3693 domain-containing protein"
                     /calculated_mol_wt=4205
     Region          <1..39
                     /region_name="DUF3693"
                     /note="Phage related protein; cl22943"
                     /db_xref="CDD:451460"
ORIGIN      
        1 maekfdglri sgfsmvcagf tvvftsplep lhqcalcilc
//
LOCUS       WP_257967651            1105 aa            linear   BCT 02-MAR-2025
DEFINITION  VWA domain-containing protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257967651
VERSION     WP_257967651.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024909.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13519.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..1105
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..1105
                     /product="VWA domain-containing protein"
     Region          75..188
                     /region_name="T1SS_rpt_143"
                     /note="T1SS-143 repeat domain; TIGR03660"
                     /db_xref="CDD:132699"
     Region          <390..487
                     /region_name="DUF5801"
                     /note="Domain of unknown function (DUF5801); pfam19116"
                     /db_xref="CDD:465976"
     Region          540..672
                     /region_name="T1SS_rpt_143"
                     /note="T1SS-143 repeat domain; TIGR03660"
                     /db_xref="CDD:132699"
     Region          <653..823
                     /region_name="YfbK"
                     /note="Secreted protein containing bacterial Ig-like
                     domain and vWFA domain [General function prediction only];
                     COG2304"
                     /db_xref="CDD:441879"
     Region          1014..1085
                     /region_name="T1SS_VCA0849"
                     /note="type I secretion C-terminal target domain (VC_A0849
                     subclass); TIGR03661"
                     /db_xref="CDD:274707"
ORIGIN      
        1 frvsvsgivd sdsnpifeal nldnafvnts itdndappsi snvvnavvse eglangipdn
       61 tgspsdttns asfsgtftva dpdtanvsvv lagpnnltsg gepiswtwdn stqtltakta
      121 hlsvvatvvl sepsasgqgs wdytitlfep ldhpvndved iinfdlqisv sdgqtttsqs
      181 lnvvveddcp yvpvvvqpvd vsltdapivl tgridfagse adatsrtfgd vvvtangfvs
      241 desamlgtae inqssegigv kssgnngfql enevdyrfag negvseqlii dlgnkvayga
      301 eiefekmfgg elekgiasfy rdgvliaqqs fssdassgdy aanfnvqqgg fdkiileaas
      361 ngngpdtedn sdftvksitf tgaysgvpia sadgnlgavy gadgpgsivl nggeagletl
      421 dgqdvliyvd pqnsnrliae adgelafevq ltpstgkwef fqylpltspy gdgdidfnyt
      481 itdndgdskt gyfsvnpyap pivegvtlnv seeglsnaia ddsalngfdd ttdsssdveq
      541 ltlgqtvdsv tlsepstalt sngisvtwal snndqmligs angkevikis vndtgmvste
      601 llgpidhsna sgedalniev pvlvsnargl tnsttvnviv eddspdsasi ihdvvaetke
      661 sanvqlimdv sgsmrtdnrl qimkdsatql lnqyesigqt rvqiitysst astyaigaat
      721 wltvdeakay ietltaggat nynnalneak qswddvgklt sasnvsyfls dgqpnpassf
      781 indareqswi dhltdpdnqi talaygmgvn lmpeqldrva ydgflnqdld gvvvpdvtql
      841 ppvmlqsviq pvggnlmytt spdtgigadg gyiseiehdg vtysfdgtdl ivtdnndgis
      901 hafddttmql tiyidskhtl eidlndgaya fygavgdtve tldfdyvltd ndgdqsentl
      961 qfvidenggv nassngsvni ieaevdvshd iligndnead ifkwvndsld tgtdlirgfe
     1021 rdldtldlse vvedaghnti eellnsidln idgddlslei thndgnsiqt iviengatef
     1081 sdlivgnadf erdvlsaltk vnlep
//
LOCUS       WP_257967717             233 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257967717
VERSION     WP_257967717.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 233)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>233
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
     Region          1..>233
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 manqtiqssa laddeidlgk lfgilidakw fiisitlffa tlgiavalls tpiykadali
       61 qiekkssggi samvgdmgel fsaessatte ieiiksrmil gdtvdkfnlt tiatpdylpf
      121 vgkglaring tqnyislttf evprtargls hqliatdiek gqfslmledq mvlsgsvgql
      181 iemngyrvkv nqlnaqnedt ftiskiskld ainklasqls isergsqtgi vsl
//
LOCUS       WP_257967563             109 aa            linear   BCT 02-MAR-2025
DEFINITION  EF-Tu/IF-2/RF-3 family GTPase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257967563
VERSION     WP_257967563.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 109)
  AUTHORS   Nissen,P., Kjeldgaard,M., Thirup,S., Polekhina,G., Reshetnikova,L.,
            Clark,B.F. and Nyborg,J.
  TITLE     Crystal structure of the ternary complex of Phe-tRNAPhe, EF-Tu, and
            a GTP analog
  JOURNAL   Science 270 (5241), 1464-1472 (1995)
   PUBMED   7491491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03144.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>109
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          <1..>109
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 ydfpgddlpv iqgsalgaln geeqweakiv elaealdtyi peperavdqp flmpiedvfs
       61 iqgrgtvvtg riergiltvg devaivgikd tttttctgve mfrklldeg
//
LOCUS       WP_257967725             115 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257967725
VERSION     WP_257967725.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 115)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>115
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          1..>115
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 ttsdenalce llhnrkadli vgnvtnnqts vlveeiyrep lvvicrkdhp rignrmdidt
       61 fynekhcvla mnwdldkeve sslnitlkts qielitssyf gvlsnvshry clgvv
//
LOCUS       WP_257967754             897 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257967754
VERSION     WP_257967754.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 897)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..897
                     /product="EAL domain-containing protein"
     Region          1..718
                     /region_name="CHASE4"
                     /note="Extracellular (periplasmic) sensor domain CHASE
                     (specificity unknown) [Signal transduction mechanisms];
                     COG3322"
                     /db_xref="CDD:442551"
     Region          <434..889
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 lryktalyfs lgllgmiisf lfisryffly sldelenmei dhssqqaiav idmmvtqqeg
       61 ssydwaywde tydlfahrdi agysernlyv etldalnldl msfitldgqs lvslsrentp
      121 esssslnnkv vsvpllqqhi lamnskldvh reslagifki ndniwglsla pvrnsegdrp
      181 sngwmlwgrn lserfpgdfk ammsasntlv tksfnpvdha ktksidktse siikwtpisd
      241 lagepiawlk tqtkrehysk gntlfiylfa tvgvvasvia tstffifkrk vatrfshfae
      301 gineiasqyq leglqsvkfd elelatklvq klsentsmtq lqlkdsmekf galyhssslg
      361 mliviereiv danhralell sykkselleq sldtlcptta decrvdamyr elqhgrnqfe
      421 aqmlnshget idclieatli qhnghtalml llqdlsenkq qaemiqkltd fdpvsgfcnr
      481 pvilgaleel vkhqpnhfsf iyitskslkq iaevyghlif deaiqyistl lrdhlgthqi
      541 grisehefiv ilpnasghsd aleaanrlln qlsykielsg imlsldskav mvdpkithqs
      601 lehlllvary saqsmsgrhm hevlvadgel seqaetsmii hrdlevairq dniipyfqpi
      661 vnaksgeiig fealarwphp tlgiisplif iplaeqgkli velgesilnq scdfigklnt
      721 krhsqglppl tvhvnlsaqh fyhsrlisfl qtmieehnis aghlvleite smlmggetes
      781 ihcineikql gvqlalddfg tgyasfssvc nfpldivkld ksyvdeietn draktlvrni
      841 anmsqelglt ivaegvetas qvrklkvwni delqgfyfyk pmtredafaq fsglphc
//
LOCUS       WP_257967755              76 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6279 family lipoprotein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257967755
VERSION     WP_257967755.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039714.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19795.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>76
                     /product="DUF6279 family lipoprotein"
ORIGIN      
        1 llladwhkke elplyidhlk eleninanni tlaflqqnre kmkahydriv srsapdlfsl
       61 slqltpkqqq eflqnv
//
LOCUS       WP_257967779             142 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257967779
VERSION     WP_257967779.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 142)
  AUTHORS   Levitz,R., Chapman,D., Amitsur,M., Green,R., Snyder,L. and
            Kaufmann,G.
  TITLE     The optional E. coli prr locus encodes a latent form of phage
            T4-induced anticodon nuclease
  JOURNAL   EMBO J 9 (5), 1383-1389 (1990)
   PUBMED   1691706
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024565.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13166.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>142
                     /product="AAA family ATPase"
     Region          <2..142
                     /region_name="AAA_13"
                     /note="AAA domain; pfam13166"
                     /db_xref="CDD:463796"
ORIGIN      
        1 mketivvvdd pvssfdsnhl fhsysflkkh cenakqlfvm thnfsyfklv rdwvlkknkf
       61 pkgkdpiiks raytiestcd gvrkskivsa ggtlteynse yhylfsklys fkdkanlnld
      121 evylcanlsr kllesflcfk lp
//
LOCUS       WP_257967805              73 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3693 domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257967805
VERSION     WP_257967805.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023888.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12472.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..73
                     /product="DUF3693 domain-containing protein"
                     /calculated_mol_wt=8131
     Region          <4..67
                     /region_name="DUF3693"
                     /note="Phage related protein; cl22943"
                     /db_xref="CDD:451460"
ORIGIN      
        1 mnckkfdrlg lssisitcae lalviaspqe plyqcalwal mfnavayhlf ikcpafegql
       61 nevsrndkkl yfs
//
LOCUS       WP_257967828            1035 aa            linear   BCT 02-MAR-2025
DEFINITION  PAAR-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257967828
VERSION     WP_257967828.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 1035)
  AUTHORS   Santos,M.N.M., Cho,S.T., Wu,C.F., Chang,C.J., Kuo,C.H. and Lai,E.M.
  TITLE     Redundancy and Specificity of Type VI Secretion vgrG Loci in
            Antibacterial Activity of Agrobacterium tumefaciens 1D1609 Strain
  JOURNAL   Front Microbiol 10, 3004 (2020)
   PUBMED   31993035
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 1035)
  AUTHORS   Pissaridou,P., Allsopp,L.P., Wettstadt,S., Howard,S.A.,
            Mavridou,D.A.I. and Filloux,A.
  TITLE     The Pseudomonas aeruginosa T6SS-VgrG1b spike is topped by a PAAR
            protein eliciting DNA damage to bacterial competitors
  JOURNAL   Proc Natl Acad Sci U S A 115 (49), 12519-12524 (2018)
   PUBMED   30455305
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025047.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13665.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..1035
                     /product="PAAR-like domain-containing protein"
                     /calculated_mol_wt=113932
     Region          6..101
                     /region_name="Tox-PAAR-like"
                     /note="Toxin PAAR-like domain; pfam13665"
                     /db_xref="CDD:433390"
     Region          <109..>175
                     /region_name="ClfA"
                     /note="Clumping factor A-related surface protein, MSCRAMM
                     (microbial surface components recognizing adhesive matrix
                     molecules) family, DEv-IgG fold [Cell
                     wall/membrane/envelope biogenesis]; COG4932"
                     /db_xref="CDD:443959"
     Region          <447..503
                     /region_name="COG4253"
                     /note="Uncharacterized conserved protein, DUF2345 family
                     [Function unknown]"
                     /db_xref="CDD:443395"
     Region          812..>878
                     /region_name="AHH"
                     /note="A nuclease family of the HNH/ENDO VII superfamily
                     with conserved AHH; pfam14412"
                     /db_xref="CDD:464166"
ORIGIN      
        1 mffpkvgkpi vpipygnnak sadlaggttt ismdggnsva ikgstfskst gdaggdrkgv
       61 tsgtieaeak fisasptvkf egkgvcrlsd qmtmnkantm clsgaqnpsv svteeqegty
      121 tlyiecrypd geplanakfk vfdgnnaeig sgvldsngrs svsslppgec yvvyeedsrk
      181 yeaktsrgln ghkyewsdde lfahcakekl afweprsvds vrstwgvfde nlgsdkdfis
      241 mlatevrahf eyeltekean disqniallf gtnddysvva neliaqvapi idkngvtlnl
      301 lhsihedesh nnilallrqq gygdsekylk elnwndwtkl vsgqldtils kvaqrfdals
      361 kyasmkgyqv aydtlqvqak sanevkaklp ditasgmekl qekssklisn gakpkvvnnf
      421 sngqttqsek vsdvvhaert lpvpfalelc yddkektpvs nvpyrltyss gevfegllng
      481 kgvasvygvp qhevpkiefg dpdkaakaea grpaqldvlk eeikdylvke tiaynatqps
      541 pqkelleelk aqteeelnel rarkaeldsa stteylwema kssiegvgdg vtnyvpdfge
      601 igdyldaldi dlsvliyait tgdideleea lkrvdrgaly lqeateamer llliisdqei
      661 reylltipql yldalpadea vkyslflatq kgidgaivvg gtaagtaagg vggpamavll
      721 tgattarssg kvierlvkvl ndvvagkkhs knnhkekpkd deteldkicp icrdskcknr
      781 krlkkgkgqn kkggyldame kayrskgksy peghdwyvgt gslevhhvip leavsddvfk
      841 elfddfrhdi ndvhnleala gimelacelg vqrhqgnhaq gmalseneka lsileghetn
      901 arheniksfn rklfknnkiq gnelrypkaa knqvldlkdr vekgllckya dntkkvnmmf
      961 eremkkhskk ilgyiqdftw tiaydgrdyr qggpgcsnvs tikqkrkglq ranfceardh
     1021 gfglgrfngt lklgk
//
LOCUS       WP_257967838              63 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257967838
VERSION     WP_257967838.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 63)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 63)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 63)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 63)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 63)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 63)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 63)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 63)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 63)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..63
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>63
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
     Region          <1..>62
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mgdlllkgvs srliesvrec dmcfrvggde fiilfklsds yreeyqidai kckitnilsk
       61 pfs
//
LOCUS       WP_257967852             930 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6701 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257967852
VERSION     WP_257967852.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042738.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20419.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..930
                     /product="DUF6701 domain-containing protein"
     Region          435..924
                     /region_name="DUF6701"
                     /note="Family of unknown function (DUF6701); pfam20419"
                     /db_xref="CDD:466568"
ORIGIN      
        1 ahqgivlegn nrigepnkri slrslsvelk vnneqassie dyqnkhtviy gdllsayptk
       61 lhnvlidgdi vltgstlhid gkyntiigki lthsttdifn anvcgtiesk ghqlhlktnh
      121 pfqqhfvvgd ivahssllid dmavygttes kgasaalngs fyakdtaiky fqtlnfnqgv
      181 gsqvcgeiqq tpgsshphsv tgkysqfcgv gqsrcdysss icpstaappp ecsmlppsnd
      241 dlgltvtpsd dmalmcgddl pqftaittnn devvsapvma mlsdpdlftl evvkgkptst
      301 enqfqsndng elvvrvipnd idkialdany yltftmvgds akeqtvnfmf tpfmfeaysn
      361 errtlneirv iagkpenvht rllacastge pvvasnyngk pkvvhplikp lggsegdfsy
      421 saefkdglse hglitnesgl fevtlsdqfe ckgfsecpdd gtvevtgkfn vysrpwtlai
      481 cenqntlssg tseqgdkfia agehfsltvk pviwqkggsi sdpidssayc dalvttnfmh
      541 dgapaasvvl sseqhspldt anqtstllks nyaltqghqs aknhrfvfng lywaevgslk
      601 vkanldstyf gmkvnegyrh igrfypkyfk vqsqdwtypk nqgfvymnqp fekvtydvva
      661 lnankedvkn yahfapslqq hfylgelggy qdrfvppapq kaewkrigda sigqfvieka
      721 stnatchnsp cwekditkgq ypdgpfngga nskgskiglv tthvvdevnf fdggeiltkq
      781 pdirfgrlnf kdvggnqgmk ikvpldvevw qdgrfvtnfd dnsttangay ytstpiwsna
      841 lvnnaqlsgv akmsvgrtnd iiasqidaar eqiqfslnld hsgnqlpwlk ydwetstpee
      901 enpptivtfg ihrgndriiy rgepnmlgln
//
LOCUS       WP_257967919             101 aa            linear   BCT 02-MAR-2025
DEFINITION  alcohol dehydrogenase catalytic domain-containing protein
            [Peribacillus deserti].
ACCESSION   WP_257967919
VERSION     WP_257967919.1
KEYWORDS    RefSeq.
SOURCE      Peribacillus deserti
  ORGANISM  Peribacillus deserti
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Peribacillus.
REFERENCE   1  (residues 1 to 101)
  AUTHORS   Taneja,B. and Mande,S.C.
  TITLE     Conserved structural features and sequence patterns in the GroES
            fold family
  JOURNAL   Protein Eng 12 (10), 815-818 (1999)
   PUBMED   10556240
REFERENCE   2  (residues 1 to 101)
  AUTHORS   Murzin,A.G.
  TITLE     Structural classification of proteins: new superfamilies
  JOURNAL   Curr Opin Struct Biol 6 (3), 386-394 (1996)
   PUBMED   8804825
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08240.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Peribacillus deserti"
                     /db_xref="taxon:673318"
     Protein         1..101
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /calculated_mol_wt=10997
     Region          28..>97
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
ORIGIN      
        1 mevflwklkq qspiirvkfk rkplkanpka nevlmkivas gdcntnavar dlgltpypvi
       61 lchegsgive kvgegvrtik pgdhvvlsca fcghcenysh p
//
LOCUS       WP_257967932             747 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Peribacillus deserti].
ACCESSION   WP_257967932
VERSION     WP_257967932.1
KEYWORDS    RefSeq.
SOURCE      Peribacillus deserti
  ORGANISM  Peribacillus deserti
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Peribacillus.
REFERENCE   1  (residues 1 to 747)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Peribacillus deserti"
                     /db_xref="taxon:673318"
     Protein         1..747
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=84479
     Region          75..187
                     /region_name="PAS"
                     /note="PAS fold; pfam00989"
                     /db_xref="CDD:395786"
     Region          134..740
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mkmvlrkqkr nriaiicifi ivseilfdag sfiipesklv lwfvhfcfsi ltvflllrll
       61 ggsdkisael hksnqklrni ldtldvaiws hdmkantlii speiekmygy skekfyqdls
      121 lwnkvidped syilderaer lqsglpvtsv yrikrpdgev rwiqdrgipt ldskgemvyf
      181 tsvlfditdr resedlyrsl idmspdiitv isnkqidyvn etgsrlvgaa vpceligkpi
      241 stfvspesir dirnvlnase qsvsgmtrfe levkrldggt iememsampi lyegrqarqv
      301 vgrditerkk aertiehmay hdsltglpnr nmfrntldsl mqdsavegla vlfldidrfk
      361 iindtkghti gdsllkqvaq rletavgkeg lvsrqggdef iillkdmdld yvekvaqril
      421 skfakpfaln gdeffvtpsi gisvypkdga dqdtlikhad tamylakekg knnyqfytpd
      481 ldsqslrkme lekglrkala ynqfvlhyqp qvqvesgnvv giealirweh pklgiispge
      541 fiplaeetgl ivqmgkwvlr taaeqnkrwq daglppvpva vnvsvrqiqd dglvedvkqi
      601 leetglapry leleitesim qnierstiil delkdlgvil slddfgkgys slsylkhlpi
      661 diikidksfi ddildlsspg siakaiidmg qnmnftviae giekeeqvaf llenackigq
      721 gyyfsrpvpa hliseflqkr lqeiiiq
//
LOCUS       WP_257967945             448 aa            linear   BCT 02-MAR-2025
DEFINITION  solute carrier family 23 protein [Peribacillus deserti].
ACCESSION   WP_257967945
VERSION     WP_257967945.1
KEYWORDS    RefSeq.
SOURCE      Peribacillus deserti
  ORGANISM  Peribacillus deserti
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Peribacillus.
REFERENCE   1  (residues 1 to 448)
  AUTHORS   Hogue,D.L. and Ling,V.
  TITLE     A human nucleobase transporter-like cDNA (SLC23A1): member of a
            transporter family conserved from bacteria to mammals
  JOURNAL   Genomics 59 (1), 18-23 (1999)
   PUBMED   10395795
REFERENCE   2  (residues 1 to 448)
  AUTHORS   Tsukaguchi,H., Tokui,T., Mackenzie,B., Berger,U.V., Chen,X.Z.,
            Wang,Y., Brubaker,R.F. and Hediger,M.A.
  TITLE     A family of mammalian Na+-dependent L-ascorbic acid transporters
  JOURNAL   Nature 399 (6731), 70-75 (1999)
   PUBMED   10331392
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013056.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00860.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Peribacillus deserti"
                     /db_xref="taxon:673318"
     Protein         1..448
                     /product="solute carrier family 23 protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47016
     Region          30..427
                     /region_name="Xan_ur_permease"
                     /note="Permease family; cl23746"
                     /db_xref="CDD:474042"
ORIGIN      
        1 meekemyesq qeiavgidek lppvkaflyg lqhvfvsnvw ldpifvaami glplsqsani
       61 vnaifitagi vtliqagklv klpiiqgpsa afdaimisag kanglaaasg gillsaaivf
      121 llsitgvigr lkalftpais gtviflvgis lsgftlhefl ggspgdktfa apstlvlsvt
      181 tsaivlilsl fgkgiwksfs flialiigdi iafaigrtnf saigdkawfg lpdflpyggl
      241 tfewstfltf ftayivavie amgvyqassa mlktpldskr irngfagesa gsfvssligg
      301 fpttayaqnv gllrltgvgs rfpvmaagvi flvlgfvpka gallaltpdp vvggiflpaa
      361 atliytgisi lakvehsern ymiiglsill avslpsyavn vkgtlgtflt nsiligafms
      421 vflqlllvnl pnwlkkgkdh etgfdihn
//
LOCUS       WP_257967995             786 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Peribacillus deserti].
ACCESSION   WP_257967995
VERSION     WP_257967995.1
KEYWORDS    RefSeq.
SOURCE      Peribacillus deserti
  ORGANISM  Peribacillus deserti
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Peribacillus.
REFERENCE   1  (residues 1 to 786)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 786)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012234.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00004.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..786
                     /organism="Peribacillus deserti"
                     /db_xref="taxon:673318"
     Protein         1..786
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=88893
     Region          245..506
                     /region_name="spore_V_K"
                     /note="stage V sporulation protein K; TIGR02881"
                     /db_xref="CDD:163057"
     Region          521..774
                     /region_name="spore_V_K"
                     /note="stage V sporulation protein K; TIGR02881"
                     /db_xref="CDD:163057"
ORIGIN      
        1 mmnendeqni eklvkeltle adekgyveny slifgllakl ensagetdkn ksfliselyg
       61 ilamtrkkli gedklfkawi haavqynkkn sranrllaes kwkqysdife gysfphiret
      121 dnrttkkkia dqyietcrki ldtavetaed lreaqshmak nphtelsrky ndlldavtai
      181 eeavtgllhs avdyeasitg vfhtavhfny vkihvekfge liaewrsffk edeleeprds
      241 smhalnelvg lkevknrind yykylqyqrk rnelgfiskd emslnmvltg npgtgkttla
      301 rlfakifnel gvlpreevie vdrsqlvgay vgqteenvrq vvekalggvl fideayalrr
      361 adssgsdfgq taidtlvslm tsseysgkfs vilagypeem rqflhtnpgl rsrfptsnlf
      421 dlpdyslsel lqiahqtaad ndyvitadae telgkriere kvdetfgnar tvrslvmeai
      481 fkkgsrlers dsqnllqfas lskedfaadd taqssdpksg leqliglgai kdeiqtiesf
      541 vklqqlrrer glpvvpvqlh avftgnpgtg kttvaklyse ilrdcgmlkr ghliaasrad
      601 fvagyvgqta iktkkkirea lggllfidea ysllsgsegd fgkevidtlv demtkhnenl
      661 vvvlagypne mnqllnmnpg lrsrfkkfih fpdyspselm eiitvyaesf qyelsqdvrd
      721 ylvnylgtht vhgnarfatn lideviqiqa yrvmsedeqv hmnpdllklq kedflktfek
      781 rergeg
//
LOCUS       WP_257968002             133 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase-like protein [Peribacillus deserti].
ACCESSION   WP_257968002
VERSION     WP_257968002.1
KEYWORDS    RefSeq.
SOURCE      Peribacillus deserti
  ORGANISM  Peribacillus deserti
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Peribacillus.
REFERENCE   1  (residues 1 to 133)
  AUTHORS   Izard,T.
  TITLE     Structural basis for chloramphenicol tolerance in Streptomyces
            venezuelae by chloramphenicol phosphotransferase activity
  JOURNAL   Protein Sci 10 (8), 1508-1513 (2001)
   PUBMED   11468347
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019544.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07931.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Peribacillus deserti"
                     /db_xref="taxon:673318"
     Protein         1..133
                     /product="phosphotransferase-like protein"
                     /calculated_mol_wt=14790
     Region          <1..122
                     /region_name="COG3896"
                     /note="Chloramphenicol 3-O-phosphotransferase [Defense
                     mechanisms]"
                     /db_xref="CDD:443103"
ORIGIN      
        1 myesiaaqsr lglnvvvdvg hhdfystrrg ilyncarvlk dfpvlfvgir cpldvimerr
       61 iatwgtgyte dggvpqpvil wqesvhvpgi ydleldtsvl sskkcadair krietdpygi
      121 afkqisemns egd
//
LOCUS       WP_257968015             129 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Peribacillus deserti].
ACCESSION   WP_257968015
VERSION     WP_257968015.1
KEYWORDS    RefSeq.
SOURCE      Peribacillus deserti
  ORGANISM  Peribacillus deserti
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Peribacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Peribacillus deserti"
                     /db_xref="taxon:673318"
     Protein         1..129
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=14826
     Region          3..123
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(4..6,20,36..38)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133406"
ORIGIN      
        1 mklkisevae lanvtkrtvd yytnqgllra ersasnyryy dreavdqigv ierlkdekls
       61 laeikkrlkv dqaenadiee lkmkiqdlem dvsdimnile kkgltketir nnlshesisl
      121 mqtllllli
//
LOCUS       WP_257968040             212 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphatase PAP2 family protein [Peribacillus deserti].
ACCESSION   WP_257968040
VERSION     WP_257968040.1
KEYWORDS    RefSeq.
SOURCE      Peribacillus deserti
  ORGANISM  Peribacillus deserti
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Peribacillus.
REFERENCE   1  (residues 1 to 212)
  AUTHORS   Neuwald,A.F.
  TITLE     An unexpected structural relationship between integral membrane
            phosphatases and soluble haloperoxidases
  JOURNAL   Protein Sci 6 (8), 1764-1767 (1997)
   PUBMED   9260289
REFERENCE   2  (residues 1 to 212)
  AUTHORS   Stukey,J. and Carman,G.M.
  TITLE     Identification of a novel phosphatase sequence motif
  JOURNAL   Protein Sci 6 (2), 469-472 (1997)
   PUBMED   9041652
REFERENCE   3  (residues 1 to 212)
  AUTHORS   Messerschmidt,A. and Wever,R.
  TITLE     X-ray structure of a vanadium-containing enzyme: chloroperoxidase
            from the fungus Curvularia inaequalis
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 392-396 (1996)
   PUBMED   8552646
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013718.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01569.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Peribacillus deserti"
                     /db_xref="taxon:673318"
     Protein         1..212
                     /product="phosphatase PAP2 family protein"
                     /calculated_mol_wt=24611
     Region          37..195
                     /region_name="PAP2_like"
                     /note="PAP2_like proteins, a super-family of histidine
                     phosphatases and vanadium haloperoxidases, includes type 2
                     phosphatidic acid phosphatase or lipid phosphate
                     phosphatase (LPP), Glucose-6-phosphatase,
                     Phosphatidylglycerophosphatase B and bacterial acid...;
                     cl00474"
                     /db_xref="CDD:469784"
     Site            order(94,102,132..134,170,176,180)
                     /site_type="active"
                     /db_xref="CDD:238813"
ORIGIN      
        1 metlkrkfpf llllliipal gfiytvlnen prratsista ldqhipfipv fiipyiiwya
       61 yvlgyliyfc fkdtkvyiks lititigeci cfiiffyfqt tvnrpeispe vpfyhlvnfi
      121 yendrpfncf psihvlttyv imlaslhikn khplhsiliq gmgsliilst lfvkqhviwd
      181 mvgsmflvsy iygiifelvn iriaqkaktv ek
//
LOCUS       WP_257968052             134 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Peribacillus deserti].
ACCESSION   WP_257968052
VERSION     WP_257968052.1
KEYWORDS    RefSeq.
SOURCE      Peribacillus deserti
  ORGANISM  Peribacillus deserti
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Peribacillus.
REFERENCE   1  (residues 1 to 134)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 134)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Peribacillus deserti"
                     /db_xref="taxon:673318"
     Protein         1..134
                     /product="VOC family protein"
                     /calculated_mol_wt=15039
     Region          11..127
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mipkihsslk vllvsdlems mmfykdvmgc evtewwaird gfsglgikli qadttgevrp
       61 nristennsp vpdiycyven wyvldelyke lkskgakvvi epwidqggrp wkefaivdpd
      121 nyciafggtn sqag
//
LOCUS       WP_257968073             195 aa            linear   BCT 02-MAR-2025
DEFINITION  site-specific integrase [Peribacillus deserti].
ACCESSION   WP_257968073
VERSION     WP_257968073.1
KEYWORDS    RefSeq.
SOURCE      Peribacillus deserti
  ORGANISM  Peribacillus deserti
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Peribacillus.
REFERENCE   1  (residues 1 to 195)
  AUTHORS   Subramanya,H.S., Arciszewska,L.K., Baker,R.A., Bird,L.E.,
            Sherratt,D.J. and Wigley,D.B.
  TITLE     Crystal structure of the site-specific recombinase, XerD
  JOURNAL   EMBO J 16 (17), 5178-5187 (1997)
   PUBMED   9311978
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014898.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02899.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Peribacillus deserti"
                     /db_xref="taxon:673318"
     Protein         1..195
                     /product="site-specific integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=22603
     Region          1..>182
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
ORIGIN      
        1 mnyiqaaddy lmylqvekny svntlisyaf dlklygdfla andrslvldr ltsstvrrfv
       61 qdqvinhgik prtlqrrisc lksfsqyclk enymksdfta giqapkadkk lprymtlqel
      121 hklfayleqd prpqalrnel mfkllattgm rrqelvdliw eqldldnhti lvrgkgkkrt
      181 ppppspnsft vvpri
//
LOCUS       WP_257968159              96 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6058 family natural product biosynthesis protein, partial
            [Vibrio parahaemolyticus].
ACCESSION   WP_257968159
VERSION     WP_257968159.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 96)
  AUTHORS   Qin,Z., Munnoch,J.T., Devine,R., Holmes,N.A., Seipke,R.F.,
            Wilkinson,K.A., Wilkinson,B. and Hutchings,M.I.
  TITLE     Formicamycins, antibacterial polyketides produced by Streptomyces
            formicae isolated from African Tetraponera plant-ants
  JOURNAL   Chem Sci 8 (4), 3218-3227 (2017)
   PUBMED   28507698
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039336.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19531.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..96
                     /product="DUF6058 family natural product biosynthesis
                     protein"
     Region          <1..92
                     /region_name="DUF6058"
                     /note="Family of unknown function (DUF6058); pfam19531"
                     /db_xref="CDD:437363"
ORIGIN      
        1 gvheiimedw ehflqgtygl ctqtglpedi aakgfaveqi kallerdvld sneikrleyf
       61 vnlldnassp fapherlnss rhrlvnevrr kyklqs
//
LOCUS       WP_257968170             261 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968170
VERSION     WP_257968170.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 261)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>261
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          3..261
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(7,9..10,12,32..34,63..65,103..105,131,135,158..161)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187543"
     Site            order(81,105,131,135)
                     /site_type="active"
                     /db_xref="CDD:187543"
ORIGIN      
        1 mgilvtgagg figrelmeii pdakavsrns lsqtfknsiq iptidentnw qgafddvsti
       61 ihlaglahsh sssladyysi nvkgtlhlar eavkagvkrf vfvssigvng ksttnkppfs
      121 hsskefpesp yaeskyeaek glrhiaeksg lelvvvrptl vygvnapgnf galvkalkfl
      181 pfspfgsidn rrdfisvqnl adllvtcanh pkapgntfla sdcstvslre fidyisfgig
      241 rniiqlpipe klmrlvgdcl g
//
LOCUS       WP_257968174             213 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257968174
VERSION     WP_257968174.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024375.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12973.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..213
                     /product="cupin domain-containing protein"
     Region          1..105
                     /region_name="cupin_ChrR_1"
                     /note="Marinobacter hydrocarbonoclasticus anti-ECFsigma
                     factor ChrR, and similar proteins; 2 heterologous tandem
                     repeats of cupin domain; cd20303"
                     /db_xref="CDD:380437"
     Site            order(1..7,27..28,30,35..36,38,59,61,63,74,77..83,85..86,
                     99,101,103,105)
                     /site_type="other"
                     /note="intramolecular domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:380437"
     Region          109..209
                     /region_name="cupin_ChrR_1"
                     /note="Marinobacter hydrocarbonoclasticus anti-ECFsigma
                     factor ChrR, and similar proteins; 2 heterologous tandem
                     repeats of cupin domain; cd20303"
                     /db_xref="CDD:380437"
     Site            order(109..115,134..135,137,139..140,142,163,165,167,178,
                     181..187,189..190,203,205,207,209)
                     /site_type="other"
                     /note="intramolecular domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:380437"
ORIGIN      
        1 fsqrvvietg rqnwvaspsq gvwrkplere akesghvtsv vkyeagsrfs phlhpygeei
       61 fvldgvfsde ngdypagsyl rnppgslhap fsekgcvilv klnqfdpndl ktvrintret
      121 ewlpgigglq vmplhdfkhe hvalvkwpkg ekfqphkhfg geeifvlsge frdelgiypt
      181 htwlrsphms ehlpfveeet viwvktghlp lgs
//
LOCUS       WP_257968180              73 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar phosphate nucleotidyltransferase, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968180
VERSION     WP_257968180.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 73)
  AUTHORS   Jensen,S.O. and Reeves,P.R.
  TITLE     Domain organisation in phosphomannose isomerases (types I and II)
  JOURNAL   Biochim Biophys Acta 1382 (1), 5-7 (1998)
   PUBMED   9507048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012695.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00483.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>73
                     /product="sugar phosphate nucleotidyltransferase"
                     /GO_function="GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <2..>72
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
ORIGIN      
        1 mfkvdsfvek pklelaekyv esgeyywnsg mfmfkaskyl delkryrpei yqsckrslek
       61 vqedcdfirv dqd
//
LOCUS       WP_257968191             452 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968191
VERSION     WP_257968191.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>452
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          248..338
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          340..430
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq prpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgiel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnaendvit teedtavtid vlvndsdveg dalsiqsasv pkeqgtvevv
      301 dgklvftpae nfngeatisy ivtdgdltde akvsvtvtpv ndspvavddt tsiqedtavt
      361 idvltndtdv dgdklsiesa svpkeqgtve vvdgklvftp aenfngqaei tytvtdgqlt
      421 deakvtvtvn pvndaptikv davesiteda vn
//
LOCUS       WP_257968218             103 aa            linear   BCT 02-MAR-2025
DEFINITION  enoyl-CoA hydratase-related protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968218
VERSION     WP_257968218.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012596.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00378.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>103
                     /product="enoyl-CoA hydratase-related protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..98
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     Site            order(8..11,23..26,32,34..35,37..38,43..44,46..47,49..50,
                     53,64,67,80,83..84)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
ORIGIN      
        1 lglicccdia igtpesrfcl sevklgllpa tigpyvirai gprqsrryfl taelidaeta
       61 lsmnilhqid sqpreavnrt idhllnsgpq amqaaktlcl rcd
//
LOCUS       WP_257968214             123 aa            linear   BCT 02-MAR-2025
DEFINITION  metallopeptidase TldD-related protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968214
VERSION     WP_257968214.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 123)
  AUTHORS   Ghilarov,D., Serebryakova,M., Stevenson,C.E.M., Hearnshaw,S.J.,
            Volkov,D.S., Maxwell,A., Lawson,D.M. and Severinov,K.
  TITLE     The Origins of Specificity in the Microcin-Processing Protease
            TldD/E
  JOURNAL   Structure 25 (10), 1549-1561 (2017)
   PUBMED   28943336
REFERENCE   2  (residues 1 to 123)
  AUTHORS   Hu,Y., Peng,N., Han,W., Mei,Y., Chen,Z., Feng,X., Liang,Y.X. and
            She,Q.
  TITLE     An archaeal protein evolutionarily conserved in prokaryotes is a
            zinc-dependent metalloprotease
  JOURNAL   Biosci Rep 32 (6), 609-618 (2012)
   PUBMED   22950735
REFERENCE   3  (residues 1 to 123)
  AUTHORS   Allali,N., Afif,H., Couturier,M. and Van Melderen,L.
  TITLE     The highly conserved TldD and TldE proteins of Escherichia coli are
            involved in microcin B17 processing and in CcdA degradation
  JOURNAL   J Bacteriol 184 (12), 3224-3231 (2002)
   PUBMED   12029038
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039907.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19289.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>123
                     /product="metallopeptidase TldD-related protein"
     Region          <1..>123
                     /region_name="TldD"
                     /note="Zn-dependent protease PmbA/TldA or its inactivated
                     homolog [General function prediction only]; COG0312"
                     /db_xref="CDD:440081"
ORIGIN      
        1 ifnseglhvd dtrhyirvag ntvaqkgneq ssgmegpgal agwefseqid akelgqtiaq
       61 qalvklgada cpsgempvvi gngfggvifh eacghllett svakkasvfh dkmgemiaht
      121 avn
//
LOCUS       WP_257968219              95 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-eliminating lyase-related protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968219
VERSION     WP_257968219.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 95)
  AUTHORS   Isupov,M.N., Antson,A.A., Dodson,E.J., Dodson,G.G.,
            Dementieva,I.S., Zakomirdina,L.N., Wilson,K.S., Dauter,Z.,
            Lebedev,A.A. and Harutyunyan,E.H.
  TITLE     Crystal structure of tryptophanase
  JOURNAL   J Mol Biol 276 (3), 603-623 (1998)
   PUBMED   9551100
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013384.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01212.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>95
                     /product="beta-eliminating lyase-related protein"
                     /GO_function="GO:0016829 - lyase activity [Evidence IEA]"
                     /GO_process="GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
     Region          1..>95
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
ORIGIN      
        1 desyagsrny ynlcsavehf fgykltvpah qgrgaeqilf paliermrqv rggetpvfis
       61 nyhfdttagh ielndgkain vvteeafdtt tpydw
//
LOCUS       WP_257968222              91 aa            linear   BCT 02-MAR-2025
DEFINITION  pseudouridine synthase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257968222
VERSION     WP_257968222.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 91)
  AUTHORS   Wrzesinski,J., Nurse,K., Bakin,A., Lane,B.G. and Ofengand,J.
  TITLE     A dual-specificity pseudouridine synthase: an Escherichia coli
            synthase purified and cloned on the basis of its specificity for
            psi 746 in 23S RNA is also specific for psi 32 in tRNA(phe)
  JOURNAL   RNA 1 (4), 437-448 (1995)
   PUBMED   7493321
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013045.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00849.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>91
                     /product="pseudouridine synthase"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /GO_process="GO:0001522 - pseudouridine synthesis
                     [Evidence IEA]"
                     /GO_process="GO:0009451 - RNA modification [Evidence IEA]"
     Region          <3..>84
                     /region_name="PseudoU_synth"
                     /note="Pseudouridine synthases catalyze the isomerization
                     of specific uridines in an RNA molecule to pseudouridines
                     (5-ribosyluracil, psi); cl00130"
                     /db_xref="CDD:469624"
     Site            4..7
                     /site_type="active"
                     /db_xref="CDD:211346"
ORIGIN      
        1 qvvhrldmst sglmvlaknk raesalkkqf qfrlthkiyy arvwghveqe egeidlplic
       61 dwpnrplqkv cfedgkpskt lfqvakreeh e
//
LOCUS       WP_257968229              78 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968229
VERSION     WP_257968229.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 78)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>78
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          1..>78
                     /region_name="PRK08155"
                     /note="acetolactate synthase large subunit; cl39075"
                     /db_xref="CDD:453955"
ORIGIN      
        1 mtgaqlvvaa lrqqgiktvf gypggaimpi ydalydggve hilcrheqga amaaigmars
       61 tqdvavcmat sgpgatnl
//
LOCUS       WP_257968246              78 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5675 family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257968246
VERSION     WP_257968246.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040141.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18925.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>78
                     /product="DUF5675 family protein"
     Region          <4..66
                     /region_name="DUF5675"
                     /note="Family of unknown function (DUF5675); pfam18925"
                     /db_xref="CDD:465915"
ORIGIN      
        1 mepfsgtkyk nvyelknvpg rtyvlihagn yhentegclm pgkswgvlkd shyyvsnskv
       61 alkeifseig kfksveir
//
LOCUS       WP_257968252             158 aa            linear   BCT 02-MAR-2025
DEFINITION  glyceraldehyde 3-phosphate dehydrogenase NAD-binding
            domain-containing protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257968252
VERSION     WP_257968252.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 158)
  AUTHORS   Kim,H., Feil,I.K., Verlinde,C.L., Petra,P.H. and Hol,W.G.
  TITLE     Crystal structure of glycosomal glyceraldehyde-3-phosphate
            dehydrogenase from Leishmania mexicana: implications for
            structure-based drug design and a new position for the inorganic
            phosphate binding site
  JOURNAL   Biochemistry 34 (46), 14975-14986 (1995)
   PUBMED   7578111
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012274.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00044.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>158
                     /product="glyceraldehyde 3-phosphate dehydrogenase
                     NAD-binding domain-containing protein"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
     Region          1..>158
                     /region_name="GapA"
                     /note="Glyceraldehyde-3-phosphate
                     dehydrogenase/erythrose-4-phosphate dehydrogenase
                     [Carbohydrate transport and metabolism]; COG0057"
                     /db_xref="CDD:439827"
ORIGIN      
        1 mtvkigingf grigrlafrr iyelgaksnd iqvvaindlt sptmlahllk ydsthgtfpg
       61 evsatdngiv vdgkeyrvya epqaqnipwv kndgvdyvle ctgfytsaek sqahldagak
      121 rvlisapagk mktivynvnd dtlnaddkiv sagscttn
//
LOCUS       WP_257968264              72 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3693 domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257968264
VERSION     WP_257968264.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023888.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12472.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..72
                     /product="DUF3693 domain-containing protein"
                     /calculated_mol_wt=8143
     Region          <3..66
                     /region_name="DUF3693"
                     /note="Phage related protein; cl22943"
                     /db_xref="CDD:451460"
ORIGIN      
        1 mekkfdrlgl ssisitcael alviaspkes lhqcalcdvm lnkvsyrlhi hpfdyqglyd
       61 elskneqelr fs
//
LOCUS       WP_257968270             324 aa            linear   BCT 02-MAR-2025
DEFINITION  OmpA family protein [Vibrio parahaemolyticus].
ACCESSION   WP_257968270
VERSION     WP_257968270.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012894.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00691.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..324
                     /product="OmpA family protein"
                     /calculated_mol_wt=35363
     Region          10..300
                     /region_name="PRK10808"
                     /note="outer membrane protein A; Reviewed"
                     /db_xref="CDD:236764"
ORIGIN      
        1 mppfqnghfy lggrlgwaay dgacgnsald ctddtfgygl yggyqfnswf aleggatsyg
       61 spdaryptgd vsadvyggev vvkldyplte rinvftrlgg ayqyiekeip aiqgdssshe
      121 wnvlsslgvs yrlsqnwsvr geyqfidgig dgsigqadsh ftsigltyhf nqqapviept
      181 piepatryvt iekplslsaq tlfafdsttv vtnqsldlli eqltsypedk vqilgytdns
      241 gseaynqrls eqrakavavy ltekgidasr ltvvgkgean pvasndtqqg rvqnrrvevr
      301 fdttinqtle atdspnetne evtk
//
LOCUS       WP_257968271             523 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase [Vibrio parahaemolyticus].
ACCESSION   WP_257968271
VERSION     WP_257968271.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 523)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..523
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=58824
     Region          23..475
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
     Site            order(31,73,242,334..335)
                     /site_type="active"
                     /db_xref="CDD:293732"
     Site            order(31,73,242,335)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293732"
ORIGIN      
        1 misdflnpke rkgafyrndq qqpnivfitv dmisadcyhp qrplsgvint pniesiateg
       61 tsfssaftps plcgparaai ftgmhppyls ngertpvgmk vdlelddiif qdylksvgys
      121 lkhsgkchvg vekfvrtfge nvhawdrwgp pvedddryla ylanmgvqlp kyrkelrglq
      181 idklspansf ggwieqqdgs dfpldahysv flaklaveqi kaskiqapak piftqleffd
      241 phqpysvpsg learyeqika vitlpdsftm qeegnpiyal yqqywgmyda evakdyiach
      301 llqvevvdha ighltrflke eglwdetaiv fsadhgdmng rmamadkgsy fqpdifripl
      361 iikppksqqt mlkqsdetvs aidvapsilg fagieipsqm egdnllnvmq gkarrpltqv
      421 yqtgvhvgcn ygfgfqvmle gkpyfygyna ttgfeelhhl dkddqsnlfd ldeyqihkea
      481 ivlqaaqllq sdprwsgyws syrlhnaryl psaggdmqml kpq
//
LOCUS       WP_257968283             144 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968283
VERSION     WP_257968283.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 144)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..144
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=16265
     Region          <2..134
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 medvcrepcv vicrnghpri gdhistemls dekhcvlask wsfdtefekh lglivksnni
       61 dsiasnylgi lthvaqsdci gviplslakk wgktfnikhf tspfdacfiq yqiayhqrkv
      121 nckrhgamra liksrvlegq qrii
//
LOCUS       WP_257968294            1172 aa            linear   BCT 02-MAR-2025
DEFINITION  SbcC/MukB-like Walker B domain-containing protein [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968294
VERSION     WP_257968294.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 1172)
  AUTHORS   Kashammer,L., Saathoff,J.H., Lammens,K., Gut,F., Bartho,J., Alt,A.,
            Kessler,B. and Hopfner,K.P.
  TITLE     Mechanism of DNA End Sensing and Processing by the Mre11-Rad50
            Complex
  JOURNAL   Mol Cell 76 (3), 382-394 (2019)
   PUBMED   31492634
REFERENCE   2  (residues 1 to 1172)
  AUTHORS   Park,Y.B., Hohl,M., Padjasek,M., Jeong,E., Jin,K.S., Krezel,A.,
            Petrini,J.H. and Cho,Y.
  TITLE     Eukaryotic Rad50 functions as a rod-shaped dimer
  JOURNAL   Nat Struct Mol Biol 24 (3), 248-257 (2017)
   PUBMED   28134932
REFERENCE   3  (residues 1 to 1172)
  AUTHORS   Seifert,F.U., Lammens,K., Stoehr,G., Kessler,B. and Hopfner,K.P.
  TITLE     Structural mechanism of ATP-dependent DNA binding and DNA end
            bridging by eukaryotic Rad50
  JOURNAL   EMBO J 35 (7), 759-772 (2016)
   PUBMED   26896444
REFERENCE   4  (residues 1 to 1172)
  AUTHORS   Hohl,M., Kwon,Y., Galvan,S.M., Xue,X., Tous,C., Aguilera,A.,
            Sung,P. and Petrini,J.H.
  TITLE     The Rad50 coiled-coil domain is indispensable for Mre11 complex
            functions
  JOURNAL   Nat Struct Mol Biol 18 (10), 1124-1131 (2011)
   PUBMED   21892167
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024947.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13558.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1172
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..1172
                     /product="SbcC/MukB-like Walker B domain-containing
                     protein"
                     /calculated_mol_wt=132515
     Region          12..1150
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
ORIGIN      
        1 mtsdkqsmns hrlsniilaq wylfeletfd vaqagatlfs gdngagktti fdaiqfvlmg
       61 gdqritryna aadgrtsert arsyalgefq dndstsllrd nansyiflnf ydelkrpysf
      121 gltfyaskqs psvekirghi ikgyhvtesd llsdegnflp wvdfvehmkr takglngamr
      181 yetvdgarii rekiaelmsr nqtrtgries nllvktlssa lqlkmdspid vfirdfilpp
      241 mpieteqlre dliahqriee eikranshka eraalleece kitnlriaah haqwvfqeak
      301 tshlneecda kedenekqqr rwekanntle lekprlpslk drhesavfaw qnsdsanlnr
      361 evaaaeravq sslnkvmtai ksfqtttldi ksfqfpdtfd iqsfelfatq wteclsdleq
      421 ikvhelsast pdsivlvadk lialkptlss igslvekadk dvsktverlk thgssiqqri
      481 krlskglsdi nqstaltidl lksagisvtp vcdvceindk ewqpaiesyl ganreallia
      541 pndferalel yeiaqlkdgr ikrariinpd halkqsrlps igmvstlvet sdstargfmn
      601 illnrtriar trsdlrretk almvsglatg sgtvggtshi dglmigknak teqkialeae
      661 llevtqrlvn vnapammlsr lnqqwaklfs almqgaedaq ninsqyriel drleqakeql
      721 kplssaderl klakeeaeka wsdcnnnisq aendrenasl emtkltvvie elstkreeae
      781 qfrtqieqsf lhdttkadqq wqkiekqfen qedlysliqn easlraqdfr ekeirargal
      841 rentiaftny fsedianrqe lleaarpdns nveaylfiea dcrdwieril svqllqhqqa
      901 aqaaaeqmeq nfrgiivgel qsrfeqmkft fnqlnrllke ipfhdniysf hysvvesesl
      961 nkvydyitta dreetelvgt mfdlpsehea igllksalin gddliteird yrnfftydmk
     1021 mknketgeen riskmqgtgs ggeqqtpayi alaasfmnvy kigsesgqga slvlldeafn
     1081 nmdagnasaa vaflkeiglq lliaappevt lkigkemdqi yticregrdv aidhtkifer
     1141 gqelidqrnp vyhpeliter vaelkskats dv
//
LOCUS       WP_257968311             208 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2726 domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257968311
VERSION     WP_257968311.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022337.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10881.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..208
                     /product="DUF2726 domain-containing protein"
                     /calculated_mol_wt=24024
     Region          79..191
                     /region_name="PDDEXK_nuclease-like"
                     /note="PDDEXK family nucleases; cl40440"
                     /db_xref="CDD:477358"
ORIGIN      
        1 mpellilisl acivylftkk gkkpkrrlne wekgatvrrp nsihsfepkv vekspdivev
       61 plpkpgnktn svphkkstyl atktergfyk vlqelipdey vihsqvslma lvqptnfkdn
      121 srtwakrmdy vitdrdtkvl avielddssh rqkkrqerdi yvnnalnghh pllrfearss
      181 ydkthiatvl erdtiikcre lesvlqys
//
LOCUS       WP_257968320             302 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase [Vibrio parahaemolyticus].
ACCESSION   WP_257968320
VERSION     WP_257968320.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 302)
  AUTHORS   de la Cruz,J., Kressler,D. and Linder,P.
  TITLE     Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and
            related families
  JOURNAL   Trends Biochem Sci 24 (5), 192-198 (1999)
   PUBMED   10322435
REFERENCE   2  (residues 1 to 302)
  AUTHORS   Aubourg,S., Kreis,M. and Lecharny,A.
  TITLE     The DEAD box RNA helicase family in Arabidopsis thaliana
  JOURNAL   Nucleic Acids Res 27 (2), 628-636 (1999)
   PUBMED   9862990
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012492.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00270.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..302
                     /product="DEAD/DEAH box helicase"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=33830
     Region          207..>254
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Region          214..>302
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            214..220
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
ORIGIN      
        1 mkilnestts ehigiknlqe nkisilisng inyecsdrri vapmygknnf fevarsykqa
       61 nirdieivid skkhpelsek alaenvenar lpifdlatgi hfdrlstvqt llegyklfks
      121 taladsisrn liqkiplhfe tsesclshyl dagsngyqkl lnalnktkan yesmlsdatk
      181 vtefdrlvev esfdnvsyli edtkfdttvl lgktgtgktk lalqpmirsa nenkrvvyls
      241 yliplvkqlc esvgavnykn dslfeienat slglvvnsay kdhlasviln cdysllmnlk
      301 rl
//
LOCUS       WP_257968354             133 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6404 family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257968354
VERSION     WP_257968354.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 133)
  AUTHORS   Hejnova,J., Pages,D., Rusniok,C., Glaser,P., Sebo,P. and
            Buchrieser,C.
  TITLE     Specific regions of genome plasticity and genetic diversity of the
            commensal Escherichia coli A0 34/86
  JOURNAL   Int J Med Microbiol 296 (8), 541-546 (2006)
   PUBMED   17049458
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040085.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19942.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..133
                     /product="DUF6404 family protein"
     Region          17..131
                     /region_name="DUF6404"
                     /note="Family of unknown function (DUF6404); pfam19942"
                     /db_xref="CDD:437774"
ORIGIN      
        1 gvrffrgkhr irgfwvmdye tklqlahkel sdkgvwksny npplvkllrk lglcfpppyy
       61 qsffanvmlc vaffapvwgi fqwflvwdel gkpvleavyi slltgalfgl vmatfyyirr
      121 kqlnltdwgs lge
//
LOCUS       WP_257968360             137 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257968360
VERSION     WP_257968360.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 137)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 137)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 137)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 137)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..137
                     /product="ATP-binding protein"
     Region          <13..137
                     /region_name="WalK"
                     /note="Sensor histidine kinase WalK [Signal transduction
                     mechanisms]; COG5002"
                     /db_xref="CDD:444026"
ORIGIN      
        1 lvkerlnfld ncdkkvkvqs ddeitlfcsp illrlaldnl isnairyscd hvhvevttkg
       61 gfiritiknd gppiednkre elfmpfsrld dsrasksggf glglaiaksa ansmegtlsl
      121 vksdaletaf elnipvk
//
LOCUS       WP_257968402            1134 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6701 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968402
VERSION     WP_257968402.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042738.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20419.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..1134
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..1134
                     /product="DUF6701 domain-containing protein"
     Region          179..428
                     /region_name="lectin_L-type"
                     /note="legume lectins; cl14058"
                     /db_xref="CDD:472686"
     Site            order(248,413)
                     /site_type="other"
                     /note="carbohydrate binding site [chemical binding]"
                     /db_xref="CDD:173886"
     Site            order(289,291,317)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:173886"
     Region          543..1129
                     /region_name="DUF6701"
                     /note="Family of unknown function (DUF6701); pfam20419"
                     /db_xref="CDD:466568"
ORIGIN      
        1 rgdvtskgga vktenlnnqv ygdiealhev vlkgtkvvgd iqslgeeikl eeagggnsvy
       61 gnlialhqve ikkslvcgqv tsrgsevkle nskenknrgi yaytnaiqas hkatvknssv
      121 cgsvvghsyd fdnekiycgv ndpsctpsdt dgtcpidviq sacpdmtpep tqckllpmed
      181 fnandisnws vigfgqsikp kpsggrfvln ssqknqatas aynylfpskd nylevefdhy
      241 ahsgsgadgv alvlsdanvp pqtgafggpl gygvkpniqg faggwlgfgi deygnysreg
      301 sfedsdyrpg fkpntvairg sgikndsghw mggylyikgn hnvgdldgrn nqnhrykvii
      361 dskqqgkvyi tiqrkigsan swttliskfd vmrgfgqttp penfrvsita stgditnihe
      421 mdnfqvcadk yqkitegihh fefdyagtgs icqasevtlr acmndscskt ypasvlssnp
      481 gasidpvtvs llpqsssvvk weggdsvtfs dsislklqay qsgsaklgia sssvpqfgfe
      541 gakcriagga lseqncnilf nsaalgvnip dkvagkpfft dgtplygien rpylefcsap
      601 sqqdgagehr dvifsverve peknavqvet yvsflkedgk fseevaidnk askdiddvyf
      661 dskgkayfnl rypeagkval kakikgekds lgqnsfvsfp aylqltvdgg lcgasdscdk
      721 sfvaagepft mkvtayqfgd dkkpaqnyqq sglivshkvt ypaadaavsg tlgttaydhl
      781 nltkgtgsfe qtvsevgafe fiitppetyl gsksfaitpa kevigrfypk yfrtdevknn
      841 qwaypngqsf tymeqafgak efyvealnad kgavtnyaff sdglharfgl kdtssyearf
      901 ssnktysgtw lnngtayvts rslgkfagst tdglvfskgs gasypdgpln lyenakdtti
      961 sikgisansd pvsidgndgv lttqpdirfg rvdlddiggn qgttlrvplr veywngsrfi
     1021 anpndnqtev tgvkaaqqhi wptdqsakdv tlgeggivts gssrsvtatq aepyrqqtrv
     1081 wldlddsang lpwlkynwdn knageenpss vvtfgihrgn drviyrgepg ltgq
//
LOCUS       WP_257968424              42 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar phosphate nucleotidyltransferase, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968424
VERSION     WP_257968424.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 42)
  AUTHORS   Jensen,S.O. and Reeves,P.R.
  TITLE     Domain organisation in phosphomannose isomerases (types I and II)
  JOURNAL   Biochim Biophys Acta 1382 (1), 5-7 (1998)
   PUBMED   9507048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012695.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00483.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..42
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>42
                     /product="sugar phosphate nucleotidyltransferase"
                     /GO_function="GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          1..>42
                     /region_name="glgC"
                     /note="glucose-1-phosphate adenylyltransferase;
                     Provisional; PRK00844"
                     /db_xref="CDD:234846"
ORIGIN      
        1 magvlgmila ggegsrlrpl tesrskpsvp fggsyrlidf al
//
LOCUS       WP_257968442              93 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968442
VERSION     WP_257968442.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 93)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>93
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
     Region          1..>93
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 manqtiqssa laddeidlgk lfgilidakw fiisitlffa tlgiavalls tpiykadali
       61 qiekkssggi samvgdmgel fsaessatte iei
//
LOCUS       WP_257968460              46 aa            linear   BCT 02-MAR-2025
DEFINITION  ion channel, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257968460
VERSION     WP_257968460.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 46)
  AUTHORS   Choe,S.
  TITLE     Potassium channel structures
  JOURNAL   Nat Rev Neurosci 3 (2), 115-121 (2002)
   PUBMED   11836519
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019500.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07885.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..46
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..46
                     /product="ion channel"
ORIGIN      
        1 lgygdispvt piaktlvyle svvgvfymav vvsslvssnl grntar
//
LOCUS       WP_257968469             195 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellin hook IN motif-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968469
VERSION     WP_257968469.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 195)
  AUTHORS   Tasteyre,A., Karjalainen,T., Avesani,V., Delmee,M., Collignon,A.,
            Bourlioux,P. and Barc,M.C.
  TITLE     Molecular characterization of fliD gene encoding flagellar cap and
            its expression among Clostridium difficile isolates from different
            serogroups
  JOURNAL   J Clin Microbiol 39 (3), 1178-1183 (2001)
   PUBMED   11230454
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018853.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07196.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>195
                     /product="flagellin hook IN motif-containing protein"
     Region          <1..195
                     /region_name="PRK08869"
                     /note="polar flagellin E"
                     /db_xref="CDD:236344"
ORIGIN      
        1 ttsfggnkll ngthgaksfq igadngeavm lelkdmrsdn kmmggvsyqa esgkgkdwnv
       61 aqgkndlkis ltdsfgqeqe ininakagdd ieelatying qtdlvkasvd qdgklqifag
      121 nnkvegevsf sgglsgelgl gdvkknvtvd tidvtsvgga qesvaiidaa lkyvdshrae
      181 lgafqnrfnh aisnl
//
LOCUS       WP_257968480             158 aa            linear   BCT 02-MAR-2025
DEFINITION  pyruvate kinase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257968480
VERSION     WP_257968480.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 158)
  AUTHORS   Yuan,M., McNae,I.W., Chen,Y., Blackburn,E.A., Wear,M.A.,
            Michels,P.A.M., Fothergill-Gilmore,L.A., Hupp,T. and
            Walkinshaw,M.D.
  TITLE     An allostatic mechanism for M2 pyruvate kinase as an amino-acid
            sensor
  JOURNAL   Biochem J 475 (10), 1821-1837 (2018)
   PUBMED   29748232
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 158)
  AUTHORS   Munoz,M.E. and Ponce,E.
  TITLE     Pyruvate kinase: current status of regulatory and functional
            properties
  JOURNAL   Comp Biochem Physiol B Biochem Mol Biol 135 (2), 197-218 (2003)
   PUBMED   12798932
REFERENCE   3  (residues 1 to 158)
  AUTHORS   Valentini,G., Chiarelli,L.R., Fortin,R., Dolzan,M., Galizzi,A.,
            Abraham,D.J., Wang,C., Bianchi,P., Zanella,A. and Mattevi,A.
  TITLE     Structure and function of human erythrocyte pyruvate kinase.
            Molecular basis of nonspherocytic hemolytic anemia
  JOURNAL   J Biol Chem 277 (26), 23807-23814 (2002)
   PUBMED   11960989
REFERENCE   4  (residues 1 to 158)
  AUTHORS   Larsen,T.M., Benning,M.M., Wesenberg,G.E., Rayment,I. and Reed,G.H.
  TITLE     Ligand-induced domain movement in pyruvate kinase: structure of the
            enzyme from rabbit muscle with Mg2+, K+, and L-phospholactate at
            2.7 A resolution
  JOURNAL   Arch Biochem Biophys 345 (2), 199-206 (1997)
   PUBMED   9308890
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012449.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00224.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>158
                     /product="pyruvate kinase"
                     /GO_function="GO:0000287 - magnesium ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0004743 - pyruvate kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0030955 - potassium ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006096 - glycolytic process [Evidence
                     IEA]"
     Region          5..>158
                     /region_name="PRK05826"
                     /note="pyruvate kinase; Provisional"
                     /db_xref="CDD:235619"
ORIGIN      
        1 mtsklrrtki vttlgpstdk dnvleeiika ganvvrmnfs hgtsedhiqr akkvraiaar
       61 lgrqvailgd lqgpkirvst fkdgkitlkv gdkftldsdl pkgegnqesv gldykelpqd
      121 vspndillld dgrvqlqvts vegnkvhtrv tvggplsn
//
LOCUS       WP_257968504             206 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968504
VERSION     WP_257968504.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 206)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>206
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
     Region          1..>205
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 manqtiqssa laddeidlgk lfgilidakw fiisitlffa tlgiavalls tpiykadali
       61 qiekkssggi samvgdmgel fsaessatte ieiiksrmil gdtvdkfnlt tiatpdylpf
      121 vgkglaring tqnyislttf evprtargls hqliatdiek gqfslmledq mvlsgsvgql
      181 iemngyrvkv nqlnaqnedt ftiski
//
LOCUS       WP_257968512             202 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF294 nucleotidyltransferase-like domain-containing protein,
            partial [Vibrio parahaemolyticus].
ACCESSION   WP_257968512
VERSION     WP_257968512.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015410.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03445.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>202
                     /product="DUF294 nucleotidyltransferase-like
                     domain-containing protein"
                     /GO_function="GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA]"
     Region          19..154
                     /region_name="DUF294"
                     /note="Putative nucleotidyltransferase DUF294; pfam03445"
                     /db_xref="CDD:460919"
ORIGIN      
        1 miekiskcns leslsllvke rqavfeamie shlpanvigq vlmmiyddft crliklaern
       61 vglppcnyaw laagsharge vhlgsdqdna lvlddsates driyfrhfam yickglaecg
      121 yplcngrfma atpkwnqplf iwkqlyrkwa nnpeynmlln lnvflevrfi sgdrslfdel
      181 nsererctkn nphliaalvr nl
//
LOCUS       WP_257968543             721 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257968543
VERSION     WP_257968543.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 721)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..721
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=78161
     Region          <27..76
                     /region_name="Cornifin"
                     /note="Cornifin (SPRR) family; pfam02389"
                     /db_xref="CDD:280537"
     Region          <57..265
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          342..416
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); pfam02368"
                     /db_xref="CDD:396788"
     Region          <611..>675
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllvtslfg cnsdsgssts qppmslpeev lpdepeieap ipelpvpefp diskpevpet
       61 pevtppepsd pvipeppvpd kvvsrialnq srvslaegel aqvkvigfyn ddtqddltsq
      121 vvwnvenadi vnidergvit avktgvsvir adldefssem tvqvvdaklt niyfdmphkv
      181 iakglsfqak aygeytdkqt rdishlvewd stdcsvvmpg tngiftaqde gdadiyaeld
      241 gltsthgsit vtpavlvsmd isstalempl gthkplvvmg tlsdgeqvdl trgitwhvdn
      301 dvveivdnvv kakhkgtalv taaldgvqse piqvqvtdai ltnievttna ssvakgnstq
      361 lsaqgvysde srvelteqva wwvdnqdvlq legarvkgla vgqamvyatk daitsaplqi
      421 qvtnavleki hvhpseitle eknvqrfyay geysdettqd vthrvtwrss nkavldliag
      481 glsnsaqlgs vtisaslgel kgisevkvve aeekesaisi cpqprsgegs veaclmvasd
      541 edgrlftapp svklmnklgy elvkplsyda tkpktyvgik tedgtrgpvg dfamfnqygr
      601 dragltsqya nwchdlsvrn fagrdnwrra trnelfslyr asrgsvwdgt esiyeedkdg
      661 ggfgwpanse ywstslmdlp hhegvvydii nlhrgraqlv mdardpayas cvsdapgvpl
      721 k
//
LOCUS       WP_257968551             870 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Vibrio parahaemolyticus].
ACCESSION   WP_257968551
VERSION     WP_257968551.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 870)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 870)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019348.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07728.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..870
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=100044
     Region          485..557
                     /region_name="DpnI_C"
                     /note="Dam-replacing HTH domain; pfam17726"
                     /db_xref="CDD:435994"
     Region          <576..867
                     /region_name="PRK11331"
                     /note="5-methylcytosine-specific restriction enzyme
                     subunit McrB; Provisional"
                     /db_xref="CDD:183088"
ORIGIN      
        1 midvnqveav lnaqlnsngl slsddsmagh agrlvdtiea qmsypdwdtr gdtlatiqfe
       61 iaqinatepf issmtnelis lakrssgter cgwfvgamyg ssgdqlprfl sqgiwqngye
      121 drylelvrsm avgdkiavks aytkkhnlpf dnkehfvsvm aikaigtitk nlndgktvev
      181 kwedafpepr ewyfntsrtt iwkvenndwm sealldfafk eksqdynrfs napywkerfg
      241 tsikqdarfk wtrfyeafat allqhksdra dltrfvtkla dnfelsyiqg kslddicpft
      301 vigifnrgit eqnrkalaee lggylgvtep lpesfegipi lnnqkswffa yenerqdsdi
      361 dnlwlifana lafsdeptee krlefvslyd avssqkgvgw nlsmglywir pwsyptldtq
      421 srtyfsslgl klerngakgr csaldylkaq edletrfnee kfpvhsfpef slkawqapvk
      481 svvksdgwka lilerikqlc leqksefftr eqfhsrylte lqtlfpdnnt admtidrqmq
      541 ilrdehiigf ldrgqyewfg feeeepelsi nsevfekysi snviedgcfl tekeisafvk
      601 rlrdkkniil qgppgtgktw lakrlafali gekrennita vqfhpnlsye dfirgwrptg
      661 dgklslcdgp flevvrkake epkqtyvvvi eeinrgnpaq ifgemltlle adkrtpseal
      721 slsykrddee riyipenlyv igtmnvadrs lalvdlalrr rfafinlepa lgdawckwvm
      781 kesgleesfl klietrmial nkqisedpkl gkqfqvghsy vtpsfyneie dpkqwfsdvv
      841 eteiypllee ywfdsiddae kakqallegl
//
LOCUS       WP_257968639             184 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellin hook IN motif-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968639
VERSION     WP_257968639.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 184)
  AUTHORS   Tasteyre,A., Karjalainen,T., Avesani,V., Delmee,M., Collignon,A.,
            Bourlioux,P. and Barc,M.C.
  TITLE     Molecular characterization of fliD gene encoding flagellar cap and
            its expression among Clostridium difficile isolates from different
            serogroups
  JOURNAL   J Clin Microbiol 39 (3), 1178-1183 (2001)
   PUBMED   11230454
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018853.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07196.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>184
                     /product="flagellin hook IN motif-containing protein"
     Region          <2..184
                     /region_name="PRK08869"
                     /note="polar flagellin E"
                     /db_xref="CDD:236344"
ORIGIN      
        1 aksfqigadn geavmlelkd mrsdnkmmgg vsyqaesgkg kdwnvaqgkn dlkisltdsf
       61 gqeqeinina kagddieela tyingqtdlv kasvdqdgkl qifagnnkve gevsfsggls
      121 gelglgddkk nvtvdtidvt svggaqesva iidaalkyvd shraelgafq nrfnhaisnl
      181 dnin
//
LOCUS       WP_257968678             222 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: P-II family nitrogen regulator [Planococcus].
ACCESSION   WP_257968678
VERSION     WP_257968678.1
KEYWORDS    RefSeq.
SOURCE      Planococcus
  ORGANISM  Planococcus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae.
REFERENCE   1  (residues 1 to 222)
  AUTHORS   Nichols,C.E., Sainsbury,S., Berrow,N.S., Alderton,D.,
            Saunders,N.J., Stammers,D.K. and Owens,R.J.
  TITLE     Structure of the PII signal transduction protein of Neisseria
            meningitidis at 1.85 A resolution
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 62 (Pt 6), 494-497
            (2006)
   PUBMED   16754965
REFERENCE   2  (residues 1 to 222)
  AUTHORS   Cheah,E., Carr,P.D., Suffolk,P.M., Vasudevan,S.G., Dixon,N.E. and
            Ollis,D.L.
  TITLE     Structure of the Escherichia coli signal transducing protein PII
  JOURNAL   Structure 2 (10), 981-990 (1994)
   PUBMED   7866749
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012753.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00543.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Planococcus"
                     /db_xref="taxon:1372"
     Protein         1..222
                     /product="P-II family nitrogen regulator"
                     /GO_function="GO:0030234 - enzyme regulator activity
                     [Evidence IEA]"
                     /GO_process="GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA]"
                     /calculated_mol_wt=23270
     Region          2..94
                     /region_name="CdAMP_rec"
                     /note="Cyclic-di-AMP receptor; cl00412"
                     /db_xref="CDD:469761"
     Region          <147..215
                     /region_name="CdAMP_rec"
                     /note="Cyclic-di-AMP receptor; cl00412"
                     /db_xref="CDD:469761"
ORIGIN      
        1 miaivkrgas rdviaaakea gadgatvlya egigrnekpt flglpathek dvvfiavdge
       61 iefavaeais haaklgksgy glgftvhlsq llgvphlndr eddrkkkrgv ekmpepkdfq
      121 livtivnsgd sgqvvkaaak agaeggtile grgtgvneqk kfmnftidpe kdvvltlvps
      181 vfaekvvasi eqavdldapg kgiaflidve nvfgvnhssl np
//
LOCUS       WP_257968695            1179 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6701 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968695
VERSION     WP_257968695.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042738.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20419.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..1179
                     /product="DUF6701 domain-containing protein"
     Region          215..473
                     /region_name="lectin_L-type"
                     /note="legume lectins; cl14058"
                     /db_xref="CDD:472686"
     Site            order(286,458)
                     /site_type="other"
                     /note="carbohydrate binding site [chemical binding]"
                     /db_xref="CDD:173886"
     Site            order(337,339,362)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:173886"
     Region          588..1174
                     /region_name="DUF6701"
                     /note="Family of unknown function (DUF6701); pfam20419"
                     /db_xref="CDD:466568"
ORIGIN      
        1 plgvqtnfns ttlnitaqni gqicdnsnlc qsntysvdgg rgieieitsn lgkldinqyn
       61 spyeqvkvvl pnqtnigtlv mevgpsddvr lvipedaevt lgewahtghg kysffnqski
      121 nvsgksvvfn npitvtteyy vtlyapdadi lfktnnpsfy gfilansisf enpitvygsv
      181 ttrhltmkng vviqkpdysc piappvqqct llpmetfssn nidnwsvigy gnsvkptven
      241 grfrlngntp rqatasayny ifpsnenyle iefdhyaygg gsngadgval visdanvppq
      301 tgafggplgy gmklrknhsg evsqdvegfa ggwlgigide ygnfyregge nlashgsans
      361 vgirgagfkd nngkwlkgyk yikgeqfsqp ldnrpsiphr ykvilnsrns gvitlsvqrk
      421 vgvngqwstv isdfdvltag nfnytpdnfr isvtastgal tnthemddfq vcadkyqkit
      481 egihhfefdy agtgsicqas evtlracmnd scsktypasv lssnpgasid pvtvsllpqs
      541 ssvvkweggd svtfsdsisl klqayqsgsa klgiasssvp qfgfegakcr iaggalseqn
      601 cnilfnsaal gvnipdkvag kpfftdgtpl ygienrpyle fcsapsqqdg agehrdvffs
      661 vervepekna vqvetyvsfl kedgkfseev aidnkastei dnvyfdskgk ayfnlrypea
      721 gkvalkakik gekdslgqns fvsfpaylql tvdgglcgas dscdksfvaa gepftmkvta
      781 yqfgddkkpa qnyqqsgltv shkvtypaad aavsgtlgtt aydhlnltkg tgsfeqtise
      841 vgafeftitp petylgsksf aitpakevig rfypkyfrtd evknnqwayp ngqsftymeq
      901 afgakefyve alnadkgavt nyaffsdglh arfglkdtsf yearfssnkt ysgtwlnngt
      961 ayvtsrslgk fagsttdglv fskgsgasyp dgplnlyena kdttisikgi sansdpvsid
     1021 gndgvlttqp dirfgrvdld diggnqgstl hvplrveywn gsrfianpnd nqtevtgvka
     1081 aqqpiwptdq sakdvtlgeg givtsgssrs vtatqaepyr qqtrvwldld dsanglpwlk
     1141 ynwdnknage enpssvvtfg ihrgndrviy rgepgltgq
//
LOCUS       WP_257968702             721 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257968702
VERSION     WP_257968702.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 721)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..721
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=78121
     Region          <27..76
                     /region_name="Cornifin"
                     /note="Cornifin (SPRR) family; pfam02389"
                     /db_xref="CDD:280537"
     Region          <57..265
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          342..416
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); pfam02368"
                     /db_xref="CDD:396788"
     Region          <611..>675
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllltslfg cnsdsgssts qppmslpeev lpdepeieap ipelpvpefp diskpevpet
       61 pevtppepsd pvipeppvpd kvvsritlnq srvslaegel aqvkvigfyn dgtqddltsq
      121 vvwnvenadi vnidergvit alktgvsvir adldefssem tvqvvdaklt niyfdlphka
      181 iakglsfqak aygeytdkqt rdishlvewd stdcsvvmpg tngiftaqde gdadiyaeld
      241 gltsthgsit vtpavlvsmd isstalempl gthkplvvmg tlsdgeqvdl trgitwhadn
      301 dvveivdnvv kakhkgtalv taaldgvqse piqvqvtdai ltnievttna ssvakgnstq
      361 lsaqgvysde srvelteqva wwvdnqdvlq legarvkgla vgqamvyatk daitsaplqi
      421 qvtnavleki hvhpseitle eknvqrfyay geysdettqd vthrvtwrss nkavldliag
      481 glsnsaqlgs vtisasfgel kgisevkvve aeekesaisi cpqprsgegs veaclmvasd
      541 edgrlftapp svklmnklgy elvkplsyda tkpktyvgik tedgtrgpvg dfamfnqygr
      601 dragltsqya nwchdlsvrn fagrdnwrra trnelfslyr asrgsvwdgt esiyeedkdg
      661 ggfgwpanse ywstslmdlp hhegvvydii nlhrgraqlv mdardpayas cvsdapgvpl
      721 k
//
LOCUS       WP_257968712             301 aa            linear   BCT 02-MAR-2025
DEFINITION  sodium:solute symporter family transporter, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968712
VERSION     WP_257968712.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012686.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00474.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>301
                     /product="sodium:solute symporter family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /note="Members of the Solute:Sodium Symporter (SSS), TC
                     2.A.21 as described in tcdb.org, catalyze solute:Na+
                     symport. Known solutes for members of the family include
                     sugars, amino acids, nucleosides, inositols, vitamins,
                     urea or anions, depending on the system.; Members of the
                     Solute:Sodium Symporter (SSS), TC 2.A.21 as described in
                     tcdb.org, catalyze solute:Na+ symport. Known solutes for
                     members of the family include sugars, amino acids,
                     nucleosides, inositols, vitamins, urea or anions,
                     depending on the system.; Members of the Solute:Sodium
                     Symporter (SSS), TC 2.A.21 as described in tcdb.org,
                     catalyze solute:Na+ symport. Known solutes for members of
                     the family include sugars, amino acids, nucleosides,
                     inositols, vitamins, urea or anions, depending on the
                     system."
     Region          <1..>301
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
ORIGIN      
        1 myifvnltsv lylgglalet ilgiplmysi lglalfalvy siygglsavv wtdviqvffl
       61 vlggfmttym avsfiggtdg wfaglskmvd aapghfemil dqsnpqymnl pgiavliggl
      121 wvanlyywgf nqyiiqrtla aksvseaqkg ivfaaflkli vpflvvlpgi aayvitsdpq
      181 lmaslgdiaa tnlpsaanad kaypwltqfl pvgvkgvvfa alaaaivssl asmlnstati
      241 ftmdiykeyi spdsgdhklv nvgrtaavva liiacliapm lggigqafqy iqeytglvsp
      301 g
//
LOCUS       WP_257968727             122 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6058 family natural product biosynthesis protein, partial
            [Vibrio parahaemolyticus].
ACCESSION   WP_257968727
VERSION     WP_257968727.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 122)
  AUTHORS   Qin,Z., Munnoch,J.T., Devine,R., Holmes,N.A., Seipke,R.F.,
            Wilkinson,K.A., Wilkinson,B. and Hutchings,M.I.
  TITLE     Formicamycins, antibacterial polyketides produced by Streptomyces
            formicae isolated from African Tetraponera plant-ants
  JOURNAL   Chem Sci 8 (4), 3218-3227 (2017)
   PUBMED   28507698
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039336.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19531.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..122
                     /product="DUF6058 family natural product biosynthesis
                     protein"
     Region          1..118
                     /region_name="DUF6058"
                     /note="Family of unknown function (DUF6058); pfam19531"
                     /db_xref="CDD:437363"
ORIGIN      
        1 vfeefsnrys ralsvlkgak cevdnpglne iiledwehfl qgtyglctqt glpediaakg
       61 faveqikall erdvldsnei krleyfvnll dnasspfaph erlnssrhrl vnevrrkykl
      121 qs
//
LOCUS       WP_257968731             399 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968731
VERSION     WP_257968731.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>399
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          248..338
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          331..391
                     /region_name="Cadherin_4"
                     /note="Bacterial cadherin-like domain; pfam17803"
                     /db_xref="CDD:465514"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq plpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daleedggsi iitteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnaendvit teedtavtid vlvndsdveg dalsiqsasv pseqgsvdiv
      301 dgklvftpae nfngeatity ivtdgdltde akvtvtvtpv ndspvavddt vstqedtvvt
      361 idvltndtdv dgdklsiesa svpkeqgtve vvdgklvft
//
LOCUS       WP_257968754             217 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF294 nucleotidyltransferase-like domain-containing protein,
            partial [Vibrio parahaemolyticus].
ACCESSION   WP_257968754
VERSION     WP_257968754.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015410.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03445.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>217
                     /product="DUF294 nucleotidyltransferase-like
                     domain-containing protein"
                     /GO_function="GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA]"
     Region          38..173
                     /region_name="DUF294"
                     /note="Putative nucleotidyltransferase DUF294; pfam03445"
                     /db_xref="CDD:460919"
ORIGIN      
        1 lglispqelv qrhgiqavfl iekiskcnsl eslsllvker qavfeamies hlpanvigqv
       61 lmmiydaftc rliklaernv glppcnyawl aagshargev hlgsdqdnal vlddsatesd
      121 riyfrhfamy ickglaecgy plcngrfmaa tpkwnqplfi wkqlyrkwan npeynmllnl
      181 niflevrfis gdrslfdeln sererctknn phliaal
//
LOCUS       WP_257968763             101 aa            linear   BCT 02-MAR-2025
DEFINITION  T6SS amidase immunity protein Tai4 family protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968763
VERSION     WP_257968763.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 101)
  AUTHORS   Zhang,H., Zhang,H., Gao,Z.Q., Wang,W.J., Liu,G.F., Xu,J.H., Su,X.D.
            and Dong,Y.H.
  TITLE     Structure of the type VI effector-immunity complex (Tae4-Tai4)
            provides novel insights into the inhibition mechanism of the
            effector by its immunity protein
  JOURNAL   J Biol Chem 288 (8), 5928-5939 (2013)
   PUBMED   23288853
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028005.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16695.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..101
                     /product="T6SS amidase immunity protein Tai4 family
                     protein"
ORIGIN      
        1 asplstqsde qlfkkyalss ciatyykgsd vakdavtamq gyrefsnlpl daffelsell
       61 snenidsyks ksgssielay cldfansdev hklltkakse l
//
LOCUS       WP_257968808             517 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968808
VERSION     WP_257968808.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>517
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          248..338
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          340..430
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          425..>500
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq plpgevvvts tdvgpldlna qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnakndvit teedtavtid vlvndsdveg dalsiqsasv pseqgsvdii
      301 dgklvftpae nfngeatity ivtdgdltde akvtvtvtpv ndspvavddt vstqedtvvt
      361 idvlpndsdv dgdklsiqsa svpeaqgkve ivdgklvftp aenfnghaei tytvtdgelt
      421 deakvtvtvn pvndaptikv davesitena vstdtvvatl tvrdtdtped rltvslenns
      481 ngyfvlvgne vkltqagvda vnndelnlkd ltisasv
//
LOCUS       WP_257968821             729 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257968821
VERSION     WP_257968821.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 729)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..729
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=78944
     Region          <26..>80
                     /region_name="PRK15313"
                     /note="intestinal colonization autotransporter adhesin
                     MisL"
                     /db_xref="CDD:237940"
     Region          <57..331
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          350..424
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); pfam02368"
                     /db_xref="CDD:396788"
     Region          <619..>683
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllltslfg cnsdsgssts qppmslpeev lpdepeieap ipelpvpefp diskpeapet
       61 pevtppepsd pvipeppvpd kvvsrialnq srvslaegel aqvkvigfyn ddtqddltsq
      121 vvwnvenadi vnidergvit alktgvsvir adldefssem tvqvvdaklt niyfdlphka
      181 iakglsfqak aygeytdkqt rdishlvewd stdcsvvmpg tngiftaqde gdadiyaeld
      241 gltsthgsit vtpavlvsmd isstalempl gthkplvvmg tlsdgeqvdl trditwhvdn
      301 dvveivdndv veivdnvvka khkgtavlta aldgvqsepi qvqvtdailt nievttnass
      361 vakgnstqls aqgvysdesr velteqvaww vdnqdvlqle garvkglavg qamvyatkda
      421 itsaplqiqv tnavlekihv hpseitleek nvqrfyayge ysdettqdvt hrvtwrssnk
      481 avldliaggl snsaqlgsvs isaslgelkg tsevkvveae ekesaisicp qprsgagsae
      541 aclmvasded grlftappsv klmnklgyel vkplsydatk pktyvgikte dgtrgpvgdf
      601 amfnqygrdr agltsqyanw chdlsvrnfa grdnwrratr nelfslyras rgsvwdgtes
      661 iyeedkdggg fgwpanseyw stslmdlphh egvvydiinl hrgraqlvmd ardpayascv
      721 sdapgvplk
//
LOCUS       WP_257968834              81 aa            linear   BCT 02-MAR-2025
DEFINITION  glutamate--tRNA ligase family protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968834
VERSION     WP_257968834.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 81)
  AUTHORS   Rath,V.L., Silvian,L.F., Beijer,B., Sproat,B.S. and Steitz,T.A.
  TITLE     How glutaminyl-tRNA synthetase selects glutamine
  JOURNAL   Structure 6 (4), 439-449 (1998)
   PUBMED   9562563
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012951.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00749.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>81
                     /product="glutamate--tRNA ligase family protein"
                     /GO_function="GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
     Region          1..>81
                     /region_name="PRK05347"
                     /note="glutaminyl-tRNA synthetase; Provisional"
                     /db_xref="CDD:235424"
ORIGIN      
        1 mseadarpsn firqiidkdl adgkhtsvht rfppepngyl highaksicl nfgiaqdyqg
       61 qcnlrfddtn pekedieyve s
//
LOCUS       WP_257968876             112 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar phosphate nucleotidyltransferase, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968876
VERSION     WP_257968876.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 112)
  AUTHORS   Jensen,S.O. and Reeves,P.R.
  TITLE     Domain organisation in phosphomannose isomerases (types I and II)
  JOURNAL   Biochim Biophys Acta 1382 (1), 5-7 (1998)
   PUBMED   9507048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012695.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00483.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>112
                     /product="sugar phosphate nucleotidyltransferase"
                     /GO_function="GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <16..112
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
ORIGIN      
        1 splgtggalg llpkelpkdl plimmngdvl tkvdfqrlle fhtehdadat mcvreydyqi
       61 pygvikgegn ritsmvekpi qrffvnagiy vvspvviqsv penhhidmpt ll
//
LOCUS       WP_257968916             480 aa            linear   BCT 02-MAR-2025
DEFINITION  PAAR-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968916
VERSION     WP_257968916.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 480)
  AUTHORS   Santos,M.N.M., Cho,S.T., Wu,C.F., Chang,C.J., Kuo,C.H. and Lai,E.M.
  TITLE     Redundancy and Specificity of Type VI Secretion vgrG Loci in
            Antibacterial Activity of Agrobacterium tumefaciens 1D1609 Strain
  JOURNAL   Front Microbiol 10, 3004 (2020)
   PUBMED   31993035
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 480)
  AUTHORS   Pissaridou,P., Allsopp,L.P., Wettstadt,S., Howard,S.A.,
            Mavridou,D.A.I. and Filloux,A.
  TITLE     The Pseudomonas aeruginosa T6SS-VgrG1b spike is topped by a PAAR
            protein eliciting DNA damage to bacterial competitors
  JOURNAL   Proc Natl Acad Sci U S A 115 (49), 12519-12524 (2018)
   PUBMED   30455305
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025047.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13665.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>480
                     /product="PAAR-like domain-containing protein"
     Region          6..101
                     /region_name="Tox-PAAR-like"
                     /note="Toxin PAAR-like domain; pfam13665"
                     /db_xref="CDD:433390"
     Region          <96..176
                     /region_name="COG4253"
                     /note="Uncharacterized conserved protein, DUF2345 family
                     [Function unknown]"
                     /db_xref="CDD:443395"
     Region          226..309
                     /region_name="FIX_Ntox15_NUC_DUF4112_RhsA-like"
                     /note="Found in type sIX effector (FIX) domain of unknown
                     function co-occurring with Ntox15, endonuclease, or RHS
                     repeat domain; cd20746"
                     /db_xref="CDD:410944"
ORIGIN      
        1 mffpkvgkpi vpipygnnak sadlaggttt ismdggnsva ikgstfskst gdaggdrkgv
       61 tsgtieaeak fisasptvkf egkgvcrlsd qmtmnkantm clggaqnpsv svtedqegty
      121 tvdlylsysd gepvqgatyt ltdqsgavfe gtldnsgkas vggvapgefa ieygedsrdf
      181 mpnvptktnp nfnpsanaql iieetkkgev gfwenawtrm sgaaswiwgv ilgdfnddas
      241 veqiiantal tmipvvdqaa dvrdlsanim tllseeerdk penwlalslt lagcvptfgs
      301 avkgtckval kggkgtskdt llavlrgmgk gdpekflrtl dwvnyakqts qivsdvlkpc
      361 ievatelasy anrmgadelg ayflkladev kiidkmvpdk lkeamgefdk lfarilgkge
      421 ktypakvkhn tgesaqsgrk ndktqekrqe gvqrcqcckr litknmkhcv vsknkgakrk
//
LOCUS       WP_257968937             196 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257968937
VERSION     WP_257968937.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 196)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>196
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          <1..>196
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 vknmitgaaq mdggilvvaa tdgpmpqtre hillgrqvgi pyiivfmnkc dmvddeelle
       61 lvemevrell seydfpgddl pviqgsalga lngeeqweak ivelaealdt yipeperavd
      121 qpflmpiedv fsiqgrgtvv tgriergilt vgdevaivgi kdtttttctg vemfrkllde
      181 gragenvgal lrgtkr
//
LOCUS       WP_257968945             163 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6279 family lipoprotein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257968945
VERSION     WP_257968945.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039714.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19795.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>163
                     /product="DUF6279 family lipoprotein"
     Region          19..154
                     /region_name="DUF6279"
                     /note="Family of unknown function (DUF6279); pfam19795"
                     /db_xref="CDD:437627"
ORIGIN      
        1 lndeqetlle erlllladwh kkeelplyid hlkelenina nnitlaflqq nrekmkahyd
       61 rivsrsapdl fslslqltpk qqqeflqnvr kdyqernaky adkteaeire iilentkewm
      121 eewigelnsd qkryakqisq qtilnsplwr nyrasiyqel eyl
//
LOCUS       WP_257968955             148 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6279 family lipoprotein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257968955
VERSION     WP_257968955.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039714.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19795.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>148
                     /product="DUF6279 family lipoprotein"
     Region          28..>138
                     /region_name="DUF6279"
                     /note="Family of unknown function (DUF6279); pfam19795"
                     /db_xref="CDD:437627"
ORIGIN      
        1 mlvillagct kkflysnidw fvieylddyv slndeqetll eerlllladw hkkeelplyi
       61 dhlkelenin annitlaflq qnrekmkahy drivsrsapd lfslslqltp kqqqeflqnv
      121 rkdyqernak yadkteaeir eiilente
//
LOCUS       WP_257969018              79 aa            linear   BCT 02-MAR-2025
DEFINITION  barstar family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257969018
VERSION     WP_257969018.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 79)
  AUTHORS   Buckle,A.M., Schreiber,G. and Fersht,A.R.
  TITLE     Protein-protein recognition: crystal structural analysis of a
            barnase-barstar complex at 2.0-A resolution
  JOURNAL   Biochemistry 33 (30), 8878-8889 (1994)
   PUBMED   8043575
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013500.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01337.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>79
                     /product="barstar family protein"
     Region          41..>79
                     /region_name="Barstar_like"
                     /note="Barstar is an intracellular inhibitor of barnase,
                     an extracellular ribonuclease of Bacillus
                     amyloliquefaciens. Barstar binds tightly to the barnase
                     active site and sterically blocks it, thus inhibiting its
                     potentially lethal RNase activity inside the...; cl01048"
                     /db_xref="CDD:470045"
     Site            order(67,69,71..73,77)
                     /site_type="other"
                     /note="RNAase interaction site [polypeptide binding]"
                     /db_xref="CDD:240163"
ORIGIN      
        1 maflvlvgfs vyggmvsfsg svahyltrry saavfirrgi mridlimien enqlhelman
       61 cfgfpdyygk nwdafwdcl
//
LOCUS       WP_257969077             556 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3560 domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257969077
VERSION     WP_257969077.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023505.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12083.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..556
                     /product="DUF3560 domain-containing protein"
                     /calculated_mol_wt=63444
     Region          162..>213
                     /region_name="LPD25"
                     /note="Large polyvalent protein associated domain 25;
                     pfam18840"
                     /db_xref="CDD:436774"
     Region          292..414
                     /region_name="DUF3560"
                     /note="Domain of unknown function (DUF3560); pfam12083"
                     /db_xref="CDD:432317"
ORIGIN      
        1 mtdsnaihst itkqpqatsv ssldlsgsnk nemghtfkdg klrknakkki elllsmatki
       61 eyktqsmgmd dcwnanepqi vdvdffwtwy ekeyseldiy vsvrdgqlmy vrfsdcpyhf
      121 sndvvltfer iesddeaetq esaqlatvdd lgefdrtlti kkivvdwses yefkdgetlt
      181 leeyeakarr aaieygnelg yiktklfitl dsgevlverh dinlrcpsla vyfasyanah
      241 irfeskpcvt feqvtealeq gyisplnhde krpeptpptd etksrkvvsl gdyqeriesk
      301 kerlearaek aqaesnarye nahnlgdalp fgqpilvghh serkhrrlid nidtnmrksv
      361 eaqkkaeyle akaesvgsag iasddpeaiq klkeklesle rcqemmkain kvirskhmte
      421 adkveymqqt hnlseqkake lldgdfcgrv gfpsyalqnn satirstkqr ieeletlhne
      481 aplegqgevd gtnwtlfeed grikfafdgi psevvrnllk sngfkwsrya kawvrkmtan
      541 gvrvsqwvae dlkkmq
//
LOCUS       WP_257969098             300 aa            linear   BCT 02-MAR-2025
DEFINITION  LPD25 domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257969098
VERSION     WP_257969098.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 300)
  AUTHORS   Iyer,L.M., Burroughs,A.M., Anand,S., de Souza,R.F. and Aravind,L.
  TITLE     Polyvalent Proteins, a Pervasive Theme in the Intergenomic
            Biological Conflicts of Bacteriophages and Conjugative Elements
  JOURNAL   J Bacteriol 199 (15), e00245-17 (2017)
   PUBMED   28559295
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037425.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18840.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..300
                     /product="LPD25 domain-containing protein"
                     /calculated_mol_wt=34780
     Region          12..101
                     /region_name="LPD25"
                     /note="Large polyvalent protein associated domain 25;
                     pfam18840"
                     /db_xref="CDD:436774"
     Region          <112..>170
                     /region_name="GBP_C"
                     /note="Guanylate-binding protein, C-terminal domain;
                     cd16269"
                     /db_xref="CDD:293879"
ORIGIN      
        1 mntsieasrt qekikpisvk vhwseshefd edthydfmdf erkalevakt nprggydktk
       61 vtvlfdnedr yecrldlgcg gndagfashc lnmlayylrh qydldkpwlh dqhhlsliea
      121 iqnyefdtaf venakqeieq aemnakaede akaqaeqqew erqnrehqek enafqaslsi
      181 ppwakaviva tytdydaens dshsgyhatk tvrtlilaws ghtrnlfpel rkaclnhpst
      241 aflndpeksn ehrethwsgd gyyltdikyl rygwsvrkhv fyneaqkaky vplgelvipd
//
LOCUS       WP_257969103             273 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2303 family protein [Vibrio parahaemolyticus].
ACCESSION   WP_257969103
VERSION     WP_257969103.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021574.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10065.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..273
                     /product="DUF2303 family protein"
                     /calculated_mol_wt=31177
     Region          2..272
                     /region_name="DUF2303"
                     /note="Uncharacterized conserved protein (DUF2303);
                     cl02338"
                     /db_xref="CDD:470541"
ORIGIN      
        1 mmdksaiqqi qesanvpefl kqltaagfpi aalpdsfsmh dlekympnrn qfrgvmqtan
       61 idefvryheq yqlegnqcfi nadnmaalti fdlgtqsfpg hckhqaklsl rktaafnall
      121 nineerlnqk klaewvedys efiqvfstag dliensvasa airnmkfeak agresnvddf
      181 shhqseyesi avrtkeefpm pavfkftcip ylglaertfe mrmstignet lilrikkmeq
      241 hqeemgeefq tklqahfknd eieietfigs fss
//
LOCUS       WP_257968346             192 aa            linear   BCT 02-MAR-2025
DEFINITION  conjugative transfer protein MobI(A/C) [Vibrio parahaemolyticus].
ACCESSION   WP_257968346
VERSION     WP_257968346.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 192)
  AUTHORS   Rivard,N., Colwell,R.R. and Burrus,V.
  TITLE     Antibiotic Resistance in Vibrio cholerae: Mechanistic Insights from
            IncC Plasmid-Mediated Dissemination of a Novel Family of Genomic
            Islands Inserted at trmE
  JOURNAL   mSphere 5 (4), e00748-20 (2020)
   PUBMED   32848007
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 192)
  AUTHORS   Hegyi,A., Szabo,M., Olasz,F. and Kiss,J.
  TITLE     Identification of oriT and a recombination hot spot in the IncA/C
            plasmid backbone
  JOURNAL   Sci Rep 7 (1), 10595 (2017)
   PUBMED   28878309
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 192)
  AUTHORS   Carraro,N., Sauve,M., Matteau,D., Lauzon,G., Rodrigue,S. and
            Burrus,V.
  TITLE     Development of pVCR94DeltaX from Vibrio cholerae, a prototype for
            studying multidrug resistant IncA/C conjugative plasmids
  JOURNAL   Front Microbiol 5, 44 (2014)
   PUBMED   24567731
  REMARK    Publication Status: Online-Only
REFERENCE   4  (residues 1 to 192)
  AUTHORS   Garcillan-Barcia,M.P., Francia,M.V. and de la Cruz,F.
  TITLE     The diversity of conjugative relaxases and its application in
            plasmid classification
  JOURNAL   FEMS Microbiol Rev 33 (3), 657-687 (2009)
   PUBMED   19396961
REFERENCE   5  (residues 1 to 192)
  AUTHORS   Ceccarelli,D., Daccord,A., Rene,M. and Burrus,V.
  TITLE     Identification of the origin of transfer (oriT) and a new gene
            required for mobilization of the SXT/R391 family of integrating
            conjugative elements
  JOURNAL   J Bacteriol 190 (15), 5328-5338 (2008)
   PUBMED   18539733
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039622.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19456.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     gene            1..192
                     /gene="mobI"
     Protein         1..192
                     /product="conjugative transfer protein MobI(A/C)"
                     /calculated_mol_wt=22772
     Region          54..171
                     /region_name="MobI"
                     /note="MobI protein; pfam19456"
                     /db_xref="CDD:466093"
ORIGIN      
        1 mtvlnehsaa yqwhqraqqr hpeneqecfg lalsqslkal adienfamqe pylleflasc
       61 yanqfwrihr thkdtspgry gcrvrvrnhr feaawyynwy lsanqmsqrn nkeqrvrskh
      121 lskgkgfryp pgrfskanae wesdlieyte dafalirevr heiltikqka qictkrlhkl
      181 rehfqksqng ea
//
LOCUS       WP_257968995             127 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5071 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968995
VERSION     WP_257968995.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 127)
  AUTHORS   Cheng,C., Shaw,N., Zhang,X., Zhang,M., Ding,W., Wang,B.C. and
            Liu,Z.J.
  TITLE     Structural view of a non Pfam singleton and crystal packing
            analysis
  JOURNAL   PLoS One 7 (2), e31673 (2012)
   PUBMED   22363703
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028114.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16804.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..127
                     /product="DUF5071 domain-containing protein"
     Region          2..111
                     /region_name="Cthe_2751_like"
                     /note="Uncharacterized protein domain similar to
                     Clostridium thermocellum 2751; cl17065"
                     /db_xref="CDD:418407"
     Site            order(12..13,16,37,43..44,46..47,50..51,78,81..82,86,88)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:213039"
ORIGIN      
        1 ivpnhksdle tceqlhflsn eeitpyvyel lewlqdlnwp vadpvskrll qlnlelvepl
       61 llilssdddv wkywivssfl hyvdisvydr lifklnkmki sptkqeieee vydavcvlie
      121 srsitrr
//
LOCUS       WP_257969111              58 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3693 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257969111
VERSION     WP_257969111.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023888.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12472.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..58
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..58
                     /product="DUF3693 domain-containing protein"
     Region          <1..58
                     /region_name="DUF3693"
                     /note="Phage related protein; cl22943"
                     /db_xref="CDD:451460"
ORIGIN      
        1 glsgismact glalviaspq epllqcalyl lmlnaiayvs likclsfegl fnevsrnd
//
LOCUS       WP_257969115             134 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2726 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257969115
VERSION     WP_257969115.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022337.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10881.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>134
                     /product="DUF2726 domain-containing protein"
     Region          83..>134
                     /region_name="PDDEXK_nuclease-like"
                     /note="PDDEXK family nucleases; cl40440"
                     /db_xref="CDD:477358"
ORIGIN      
        1 maeliillsl vclvflftkk gkkrkrrlne wdqgvaakrs nnvhafdpkv idrhpklvev
       61 pitqtkvies nkpssvphrk ntylatkter kfykvlqell pdeyvihsqv slmalvqptn
      121 fkdnsrtwak rmdy
//
LOCUS       WP_257969146             796 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Vibrio parahaemolyticus].
ACCESSION   WP_257969146
VERSION     WP_257969146.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024867.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13476.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..796
                     /product="AAA family ATPase"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /GO_process="GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /calculated_mol_wt=91437
     Region          4..>95
                     /region_name="SbcC"
                     /note="DNA repair exonuclease SbcCD ATPase subunit
                     [Replication, recombination and repair]; COG0419"
                     /db_xref="CDD:440188"
     Region          8..211
                     /region_name="AAA_23"
                     /note="AAA domain; pfam13476"
                     /db_xref="CDD:463890"
ORIGIN      
        1 mmlklgrmri dnfksfvepv yfdfsgsdli lfdgpngfgk ttifdaielc ftgeisrikk
       61 tddktkndhi lkgdnskats vkleildgve tllvievvip anisgdagkv anykssiqrf
      121 ehydwdhdve sslqvldvek lkyllgnekl dstftlfnyi qqeetshflk ldenkrhqqi
      181 shlfgttnet ekankldals kklkeaidsy kpvietktre lellskpthe dsvtedslgs
      241 gkiailsdls sstveqiaay kshlegidwi lknyqtyqdq kfnyqisvma nqrhnelanf
      301 vkiglvsdyr eleklkaqyl fwkktcakae dysaliemfd aepntltket lneynrlfpr
      361 kcdefsndlv ifdslkkscd sssklltkid ecrenlishy erhaayddmt kneelpcpvc
      421 gdlkpnwqgl ldeygiqaky feeqlsesdk slaevtkkli kelvmplvik mrrftthyer
      481 ylnfdfegli knkfvekqef hkmlsvknwl isnvdgcldy qdkslrdvns nyeevvqqlt
      541 flieskrktv iieedrdyls clknlkaldl afddedkliv dsddlrldiq llsrllvqks
      601 ssaykskene lqklkdkvek lsskrgeive ickvyrnkik syekdvakhi aiplfiyssk
      661 ilqsrpegsg vflitpdtdr argfmqfsat pndshdawnt mssgqlsgvv isfmlamnkv
      721 ypsnlstlmi ddpvqtmdev nmasfvqmmk nefpevqlll stheskvasy fnykyseagl
      781 stlpinmksk rlelas
//
LOCUS       WP_257969263             126 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GTP-binding protein, partial [Vibrionaceae].
ACCESSION   WP_257969263
VERSION     WP_257969263.1
KEYWORDS    RefSeq.
SOURCE      Vibrionaceae
  ORGANISM  Vibrionaceae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales.
REFERENCE   1  (residues 1 to 126)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Vibrionaceae"
                     /db_xref="taxon:641"
     Protein         1..>126
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>126
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 mskekfervk phvnvgtigh vdhgkttlta aicttlakvy ggaardfasi dnapeererg
       61 itistshvey dtptrhyahv dcpghadyvk nmitgaaqmd ggilvvaatd gpmpqtrehi
      121 llgrqv
//
LOCUS       WP_257969283             399 aa            linear   BCT 02-MAR-2025
DEFINITION  zonular occludens toxin domain-containing protein [Vibrio
            parahaemolyticus].
ACCESSION   WP_257969283
VERSION     WP_257969283.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 399)
  AUTHORS   Karyekar,C.S., Fasano,A., Raje,S., Lu,R., Dowling,T.C. and
            Eddington,N.D.
  TITLE     Zonula occludens toxin increases the permeability of molecular
            weight markers and chemotherapeutic agents across the bovine brain
            microvessel endothelial cells
  JOURNAL   J Pharm Sci 92 (2), 414-423 (2003)
   PUBMED   12532391
REFERENCE   2  (residues 1 to 399)
  AUTHORS   Rossi,M., Maurano,F., Luongo,D., Fasano,A., Uzzau,S., Auricchio,S.
            and Troncone,R.
  TITLE     Zonula occludens toxin (Zot) interferes with the induction of nasal
            tolerance to gliadin
  JOURNAL   Immunol Lett 81 (3), 217-221 (2002)
   PUBMED   11947928
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017518.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05707.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..399
                     /product="zonular occludens toxin domain-containing
                     protein"
                     /calculated_mol_wt=44331
     Region          1..394
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 mssrnpegfe lwkyffcwap igafilidec qqifsvnagf kmanihkrpf tefephlpeg
       61 fselfhsrwl tidtssldng eiddcqrtrf deqgriiype nfnnafmehr hynwdivllt
      121 pdfaqipkel kgvaelakqh kgkdgiffsn rkprilehdp trtvtkpskd dvvynlkvpl
      181 dvhllyastv tgqitksglg kniflnpkfl aamalvvlsf gylvyaligm vsdsetttae
      241 gtqlhqtsqq sgvstsqgqa rpgqsgspgs vmgssgsgct gsgcgnesyh dvgtvpawfp
      301 lansesiyvs averwhkats ihvnvhfevv tprgvtyldd gflnklgvkm eylddclvql
      361 shgasnfyvt cspyeqyaqr qeqdielkpv gglfsgdet
//
LOCUS       WP_257969295              80 aa            linear   BCT 02-MAR-2025
DEFINITION  IS3 family transposase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257969295
VERSION     WP_257969295.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024673.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13276.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>80
                     /product="IS3 family transposase"
     Region          <5..>80
                     /region_name="transpos_IS3"
                     /note="IS3 family transposase; NF033516"
                     /db_xref="CDD:468052"
ORIGIN      
        1 rrkyllglik qfwlesggvy gyrkiysdlr degefsginq vhrlmkregl qsqrgyrkpr
       61 aksgtehvis anklarefnp
//
LOCUS       WP_257969460             128 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257969460
VERSION     WP_257969460.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 128)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>128
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <1..>80
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 nvpkelqtkh latdefqila rdahplsnqa idcndlslyp ivtaivpdwn enrtliecwa
       61 erenieteta frsssilsll evisetdalf ptsaflsrkh lsglkslsls pqlkasfkse
      121 sqdiylym
//
LOCUS       WP_257969480             588 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257969480
VERSION     WP_257969480.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 588)
  AUTHORS   Clarke,T.A., Edwards,M.J., Gates,A.J., Hall,A., White,G.F.,
            Bradley,J., Reardon,C.L., Shi,L., Beliaev,A.S., Marshall,M.J.,
            Wang,Z., Watmough,N.J., Fredrickson,J.K., Zachara,J.M., Butt,J.N.
            and Richardson,D.J.
  TITLE     Structure of a bacterial cell surface decaheme electron conduit
  JOURNAL   Proc Natl Acad Sci U S A 108 (23), 9384-9389 (2011)
   PUBMED   21606337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037016.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17963.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..588
                     /product="Ig-like domain-containing protein"
     Region          44..275
                     /region_name="Peptidase_M11"
                     /note="Gametolysin peptidase M11; cl21618"
                     /db_xref="CDD:354892"
     Region          325..>532
                     /region_name="COG1470"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:441079"
     Region          487..560
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
ORIGIN      
        1 nkgiffllvl flflqniqya kaagssigqq dtlvmllnfk enpndqpits eeahalvfge
       61 vndfyqensy gktwlsgqva gwytlpvsnq vcdypsvqae adkmaradgv vledyqriiy
      121 imtqsgcagg gsattgktfp srayidgtls arviahefgh nlglshakal dcgdasvsnn
      181 csvieygdsy dvmgtpdmgy intyykermg wlndaespni ltatqdglye iaeyetqdit
      241 qnialkiprg vnpntglkew fyveyrqamg ydqflddrsy mlfrgdvtdg vivrlveega
      301 eesyilhmkp nsdysqvygr kdwkdtalpv gdsftdpvsg ltinlasaan gfagvnvsfg
      361 gsvtpsvcem sapsvsvkat sdtqvnagdt veyqltvint andvcgtirf dvsaqvesgw
      421 qassqsisla sgessvatia vtsalsatsg dypvtfnvvn tkdeaynvat qatyavaeqq
      481 tgsgdvvavd dnvqmskvst vsinvlgndi iadgvsveis amsapskgtv kllsdgsiqy
      541 tpakrfknqd sfsytitsgn vtstamvtva lqsspdsggs spgkgknk
//
LOCUS       WP_257968720             192 aa            linear   BCT 02-MAR-2025
DEFINITION  conjugative transfer protein MobI(A/C) [Vibrio parahaemolyticus].
ACCESSION   WP_257968720
VERSION     WP_257968720.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 192)
  AUTHORS   Rivard,N., Colwell,R.R. and Burrus,V.
  TITLE     Antibiotic Resistance in Vibrio cholerae: Mechanistic Insights from
            IncC Plasmid-Mediated Dissemination of a Novel Family of Genomic
            Islands Inserted at trmE
  JOURNAL   mSphere 5 (4), e00748-20 (2020)
   PUBMED   32848007
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 192)
  AUTHORS   Hegyi,A., Szabo,M., Olasz,F. and Kiss,J.
  TITLE     Identification of oriT and a recombination hot spot in the IncA/C
            plasmid backbone
  JOURNAL   Sci Rep 7 (1), 10595 (2017)
   PUBMED   28878309
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 192)
  AUTHORS   Carraro,N., Sauve,M., Matteau,D., Lauzon,G., Rodrigue,S. and
            Burrus,V.
  TITLE     Development of pVCR94DeltaX from Vibrio cholerae, a prototype for
            studying multidrug resistant IncA/C conjugative plasmids
  JOURNAL   Front Microbiol 5, 44 (2014)
   PUBMED   24567731
  REMARK    Publication Status: Online-Only
REFERENCE   4  (residues 1 to 192)
  AUTHORS   Garcillan-Barcia,M.P., Francia,M.V. and de la Cruz,F.
  TITLE     The diversity of conjugative relaxases and its application in
            plasmid classification
  JOURNAL   FEMS Microbiol Rev 33 (3), 657-687 (2009)
   PUBMED   19396961
REFERENCE   5  (residues 1 to 192)
  AUTHORS   Ceccarelli,D., Daccord,A., Rene,M. and Burrus,V.
  TITLE     Identification of the origin of transfer (oriT) and a new gene
            required for mobilization of the SXT/R391 family of integrating
            conjugative elements
  JOURNAL   J Bacteriol 190 (15), 5328-5338 (2008)
   PUBMED   18539733
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039622.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19456.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     gene            1..192
                     /gene="mobI"
     Protein         1..192
                     /product="conjugative transfer protein MobI(A/C)"
                     /calculated_mol_wt=22913
     Region          54..171
                     /region_name="MobI"
                     /note="MobI protein; pfam19456"
                     /db_xref="CDD:466093"
ORIGIN      
        1 mtvlnehsaa yqwhqraqqr hpeseqecfe lalsqslkal ddienfamqe pylleflasc
       61 yanqfwrihr thketspgry gcrvrvrnhr feaawyynwy lsanqvsqrn nkeqrvrskh
      121 lakgkgfryp psrflkanse weselieyte dafalirevr heiltikqka qictkrlhkl
      181 rehfqksqng ea
//
LOCUS       WP_257969294              86 aa            linear   BCT 02-MAR-2025
DEFINITION  EF-Tu/IF-2/RF-3 family GTPase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257969294
VERSION     WP_257969294.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 86)
  AUTHORS   Nissen,P., Kjeldgaard,M., Thirup,S., Polekhina,G., Reshetnikova,L.,
            Clark,B.F. and Nyborg,J.
  TITLE     Crystal structure of the ternary complex of Phe-tRNAPhe, EF-Tu, and
            a GTP analog
  JOURNAL   Science 270 (5241), 1464-1472 (1995)
   PUBMED   7491491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03144.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>86
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          <1..>86
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 elaealdtyi peperavdqp flmpiedvfs iqgrgtvvtg riergiltvg devaivgikd
       61 tttttctgve mfrklldegr agenvg
//
LOCUS       WP_257969405             338 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramidase domain-containing protein [Vibrio
            parahaemolyticus].
ACCESSION   WP_257969405
VERSION     WP_257969405.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 338)
  AUTHORS   Rodriguez-Rubio,L., Gerstmans,H., Thorpe,S., Mesnage,S., Lavigne,R.
            and Briers,Y.
  TITLE     DUF3380 Domain from a Salmonella Phage Endolysin Shows Potent
            N-Acetylmuramidase Activity
  JOURNAL   Appl Environ Microbiol 82 (16), 4975-4981 (2016)
   PUBMED   27287318
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023288.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11860.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..338
                     /product="N-acetylmuramidase domain-containing protein"
                     /calculated_mol_wt=36984
     Region          57..117
                     /region_name="PGRP"
                     /note="Peptidoglycan-binding (PGRP) domain of
                     peptidoglycan hydrolases [Cell wall/membrane/envelope
                     biogenesis]; COG3409"
                     /db_xref="CDD:442635"
     Region          165..331
                     /region_name="Muramidase"
                     /note="N-acetylmuramidase; pfam11860"
                     /db_xref="CDD:432137"
ORIGIN      
        1 mldgvlhscp kllkllsndi flslighdkl lqnvkggtfv vsirlsgsvg lggknvgsdi
       61 qtvqrsinql lgslkgikel kvdgklgsrp ensktvaaik afqknlvgia rpdgridvng
      121 rshrklndya krlsdttayt lplvgskdal tdadyhkvae tlgcevaaik avaevesrge
      181 ayfsngkpki lfeahifsrl tsraydsshp sissrhwnrs lyvggiseyv rlnkaielns
      241 naaiqsaswg rfqimgfnfk laghvtaesf vkavfesekk qleafvtfiq ksglgehikd
      301 knwaafargy ngseyqknqy diklekaynk yasiknaa
//
LOCUS       WP_257969526             105 aa            linear   BCT 02-MAR-2025
DEFINITION  prepilin peptidase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257969526
VERSION     WP_257969526.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 105)
  AUTHORS   Albers,S.V., Szabo,Z. and Driessen,A.J.
  TITLE     Archaeal homolog of bacterial type IV prepilin signal peptidases
            with broad substrate specificity
  JOURNAL   J Bacteriol 185 (13), 3918-3925 (2003)
   PUBMED   12813086
REFERENCE   2  (residues 1 to 105)
  AUTHORS   LaPointe,C.F. and Taylor,R.K.
  TITLE     The type 4 prepilin peptidases comprise a novel family of aspartic
            acid proteases
  JOURNAL   J Biol Chem 275 (2), 1502-1510 (2000)
   PUBMED   10625704
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013632.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01478.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>105
                     /product="prepilin peptidase"
                     /EC_number="3.4.23.43"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
     Region          2..>103
                     /region_name="Peptidase_A24"
                     /note="Type IV leader peptidase family; cl21703"
                     /db_xref="CDD:473937"
ORIGIN      
        1 nfalwltclv nvllifyddi ryrivkhrfl liifitslls lfftpepltq lavstsvfic
       61 ffilwliniv gggdvkliga lflgvndeym laaivaigll ggiqi
//
LOCUS       WP_257969537              75 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar phosphate nucleotidyltransferase, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257969537
VERSION     WP_257969537.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 75)
  AUTHORS   Jensen,S.O. and Reeves,P.R.
  TITLE     Domain organisation in phosphomannose isomerases (types I and II)
  JOURNAL   Biochim Biophys Acta 1382 (1), 5-7 (1998)
   PUBMED   9507048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012695.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00483.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>75
                     /product="sugar phosphate nucleotidyltransferase"
                     /GO_function="GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <1..>75
                     /region_name="glgC"
                     /note="glucose-1-phosphate adenylyltransferase;
                     Provisional; PRK00844"
                     /db_xref="CDD:234846"
ORIGIN      
        1 fgsdhiykmd ikqmlnfhte kkasltvsal rmplkeasqf gvievdaegr migfeekpvn
       61 pksipgepdf alvsm
//
LOCUS       WP_257969548             721 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257969548
VERSION     WP_257969548.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 721)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..721
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=78201
     Region          <27..76
                     /region_name="Cornifin"
                     /note="Cornifin (SPRR) family; pfam02389"
                     /db_xref="CDD:280537"
     Region          <57..310
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          342..416
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); pfam02368"
                     /db_xref="CDD:396788"
     Region          426..506
                     /region_name="BID_2"
                     /note="Bacterial Ig-like domain 2; smart00635"
                     /db_xref="CDD:214752"
     Region          <611..>675
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllvtslfg cnsdsgssts qppmslpeev lpdepeieap ipelpvpefp diskpevpet
       61 pevtppepsd pvipeppvpd kvvarialnq srvslvegel aqvkvigfyn ddtqddltsq
      121 vvwnvenadi vnidergvit avktgvsvir adldefssem tvqvvdaklt niyfdlphka
      181 iakglsfqak aygeytdkqt rdishlvewd stdcsvvmpg tngiftaqde gdadiyaeld
      241 gltsthgsit vtpavlvsmd issttlempl gtykplvvmg tlsdgeqvdl trgitwhadn
      301 dvveivdnvv kakhkgtalv taaldgvqse piqvqvtdai ltnievttna ssvakgnstq
      361 lsaqgvysde srvelteqva wwvdnqdvlq legarvkgla vgqamvyatk daitsaplqi
      421 qvtnavleki hvhpseitle eknvqrfyay geysdettqd vthrvtwrss nkavldliag
      481 glsnsaklgs vtisaslgel ksisevkvve aeekesaisi cpqprsgegs aeaclmvasd
      541 edgrlftapp svklmnklgy elvkplsyda tkpktyigik tedgtrgpeg dfamfnqygr
      601 dragltsqya nwchdlsvrn fagrdnwrra trnelfslyr asrgsvwdgt esiyeedkdg
      661 ggfgwpanse ywstslmdlp hhegvvydii nlhrgraqlv mdardpayas cvsdapgvpl
      721 k
//
LOCUS       WP_257969549             574 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257969549
VERSION     WP_257969549.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 574)
  AUTHORS   Clarke,T.A., Edwards,M.J., Gates,A.J., Hall,A., White,G.F.,
            Bradley,J., Reardon,C.L., Shi,L., Beliaev,A.S., Marshall,M.J.,
            Wang,Z., Watmough,N.J., Fredrickson,J.K., Zachara,J.M., Butt,J.N.
            and Richardson,D.J.
  TITLE     Structure of a bacterial cell surface decaheme electron conduit
  JOURNAL   Proc Natl Acad Sci U S A 108 (23), 9384-9389 (2011)
   PUBMED   21606337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037016.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17963.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..574
                     /product="Ig-like domain-containing protein"
     Region          30..261
                     /region_name="Peptidase_M11"
                     /note="Gametolysin peptidase M11; cl21618"
                     /db_xref="CDD:354892"
     Region          327..>518
                     /region_name="COG1470"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:441079"
     Region          473..546
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
ORIGIN      
        1 qniqyakasg ssigqqdtlv mllnfkenpn dqpitleeah alvfgevndf yqensygktw
       61 lsgqvagwyt lpvsnqvcdy psvqaeadkm aradgvvled yqriiyimtq sgcagggsat
      121 tgktfpsray idgtlsarvi ahefghnlgl shakaldcgd asvsnncsvi eygdsydvmg
      181 tpdmgyinty ykermgwlnd aespniltai qdglyeiaey etqdikqnia lkiprgvnpn
      241 tglkewfyve yrqamgydqf ldnrsymlfr gdvtdgvivr lveegaeesy ilhmkpnsdy
      301 sqvygrkdwk dtalpvgdsf tdpvsgltin lasaangfag vnvsfggsvt psvcemsaps
      361 vsvkatsdtq vnagdtveyq ltvtntandv cgtirfdvsa qvesgwqass qsislasges
      421 svatiavtsa lsatsgdypv tfnvvnmkde aynvakqaty avaeqqtgsg dvvavddnvq
      481 mskvstvsin vlgndiiadg vsveisamsa pskgtvklls dgsiqytpak rfknqdsfsy
      541 titsgnvtst amvtvalqss pdsggsspgk gknk
//
LOCUS       WP_257969508             314 aa            linear   BCT 02-MAR-2025
DEFINITION  Solitary outer membrane autotransporter beta-barrel domain, partial
            [Vibrio parahaemolyticus].
ACCESSION   WP_257969508
VERSION     WP_257969508.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 314)
  AUTHORS   Prakash,A., Yogeeshwari,S., Sircar,S. and Agrawal,S.
  TITLE     Protein domain of unknown function 3233 is a translocation domain
            of autotransporter secretory mechanism in gamma proteobacteria
  JOURNAL   PLoS One 6 (11), e25570 (2011)
   PUBMED   22073138
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022990.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11557.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..314
                     /product="Solitary outer membrane autotransporter
                     beta-barrel domain"
     Region          1..313
                     /region_name="Omp_AT"
                     /note="Solitary outer membrane autotransporter beta-barrel
                     domain; pfam11557"
                     /db_xref="CDD:371601"
ORIGIN      
        1 llstasqaet lndlivkefe ynfalsvvlt dtdvftfgfh dfdpnqyfnl snedigtads
       61 ldlrkeikef tlpysfdlae netekltyrf ngrfyllgid qdvyfneepi pdrskeqfig
      121 gynefevekq ltehfslsga lgahlihykt dytyrsdais alqpildgal intsawallg
      181 qlnaklkyle qeswgkwylw tsphyfygtg wgeanngnvg kpegwywvng vkvfydvahi
      241 gstvqsfyts fsridiggdt sdplnttnyy egsigwlmtp pfesdwidni gigltinygs
      301 dlkggslvlf fnqd
//
LOCUS       WP_257969636             688 aa            linear   BCT 02-MAR-2025
DEFINITION  SLBB domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257969636
VERSION     WP_257969636.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 688)
  AUTHORS   Burroughs,A.M., Balaji,S., Iyer,L.M. and Aravind,L.
  TITLE     A novel superfamily containing the beta-grasp fold involved in
            binding diverse soluble ligands
  JOURNAL   Biol Direct 2, 4 (2007)
   PUBMED   17250770
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022007.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10531.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..688
                     /product="SLBB domain-containing protein"
                     /calculated_mol_wt=75153
     Region          12..172
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          199..248
                     /region_name="SLBB"
                     /note="SLBB domain; pfam10531"
                     /db_xref="CDD:463136"
     Region          <288..367
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          <381..460
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          <475..569
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          <577..664
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
ORIGIN      
        1 mcvlawvtpl haadndtvkv gdlvqinlpg easlnqgfqv drrgrinlpe igpvfvagyn
       61 eqqlqdviie tlktvyrdvn narvfikqqq llvsvqgyvv kpgeytlpag sniqmfvyea
      121 gglragaqld kmivkrgdqn iefdykrfld tgdnsqlpkl esldvlfvpa splvgnieqe
      181 fdaaklansg dsadsaraik vfgevnapgs ftykpnttlv dvvmraggvt ryasveqirv
      241 itnntptmfn lktyldtgdq sllpeilpga tifvpkqeee ikaganvvyi mgevahpgay
      301 egkqgasfmd ilanaggptr yaesrqirvi kadgqvikfd ltahteglss vappkvsagd
      361 aifvpektdf nekswlkvap sravavmgev vrpgriewsd emdlidllah vggptrradt
      421 skievanngq mtnfdldqyi ldgspasnlp rvsagtvvrv halpddpsdn ksqwvsqssd
      481 asiyvfgqin apgryrftde mhfldilsaa dgptmdadih nirvthrglg yakvsklnls
      541 myfetgdesi lpdvrpgdti yipeknknwl drskestvrv lgevrepgry vfndnmtvld
      601 llaeaggptn saylekisiv nmsccqgqar tfdlvnfskt aniydlpvir agdtiyiphk
      661 desfaekara glrdilqitt tivligal
//
LOCUS       WP_257969681             721 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257969681
VERSION     WP_257969681.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 721)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..721
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=78226
     Region          <27..76
                     /region_name="Cornifin"
                     /note="Cornifin (SPRR) family; pfam02389"
                     /db_xref="CDD:280537"
     Region          <57..265
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          342..416
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); cl02708"
                     /db_xref="CDD:445894"
     Region          430..508
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); cl02708"
                     /db_xref="CDD:445894"
     Region          <611..>675
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllltslfg cnsdsgssts qppmslpeev lpdepeieap ipelpvpefp diskpevpet
       61 pevtppepsd pvipeppvpd kvvsrialnq srvslaegel aqvkvigfyn ddtqddltsq
      121 vvwnvenadi vnidergvit alktgvsvir adldefssem tvqvvdaklt niyfdlphka
      181 iakglsfqak aygeytdkqt rdishlvewd stdcsvvmpg ingiftaqde gdadiyaeld
      241 gltsthgsit vtpavlvsmd isstalempl gthkplvvmg tlsdgeqvdl trgitwhvdn
      301 dvveivdnvv kakhkgtalv taasdgvqse piqvqvtdam ltnievttna ssvakgnstl
      361 lsaqgvysde srvelteqva wwvdnqdvlq legdrvkgla vgqamiyatk daitsaplqi
      421 qvtnavleki hvhpseitle eknvqrfyay geysdettqd vthrvtwrss nkavldliag
      481 glsnsaqlgs vtisasfgel kgtsevkvve aeekesaisi cpqprsgegs aeaclmvasd
      541 edgrlftapp svklmnklgy elvkplsyev tkpktyvgik tedgtrgpvg dfamfnqygr
      601 dragltsqya nwchdlsvrn fagrdnwrra trnelfslyr asrgsvwdgt esiyeedkdg
      661 ggfgwpanse ywstslmdlp hhegvvydii nlhrgraqlv mdardpayas cvsdapgvpl
      721 k
//
LOCUS       WP_257969752              85 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Vibrio
            parahaemolyticus].
ACCESSION   WP_257969752
VERSION     WP_257969752.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 85)
  AUTHORS   Yuan,H.S., Finkel,S.E., Feng,J.A., Kaczor-Grzeskowiak,M.,
            Johnson,R.C. and Dickerson,R.E.
  TITLE     The molecular structure of wild-type and a mutant Fis protein:
            relationship between mutational changes and recombinational
            enhancer function or DNA binding
  JOURNAL   Proc Natl Acad Sci U S A 88 (21), 9558-9562 (1991)
   PUBMED   1946369
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02954.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..85
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /calculated_mol_wt=9741
     Region          <36..74
                     /region_name="HTH_8"
                     /note="Bacterial regulatory protein, Fis family; cl22895"
                     /db_xref="CDD:451442"
ORIGIN      
        1 mstptifdkk liiesikael eptrqdrqat sdmswviqmv sdelleqilv htrgnqakas
       61 rllgmnrgty rskinairer klwid
//
LOCUS       WP_257969696             293 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257969696
VERSION     WP_257969696.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 293)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 293)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..293
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          86..283
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(98,112..113,216,218,243,275)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:271175"
     Site            order(112,243,246,266,275)
                     /site_type="active"
                     /db_xref="CDD:271175"
ORIGIN      
        1 diarlneflg dkfsksinle tmndflntyy gdkskevynk klsrlkkifs yladesaige
       61 nfmlnkkpkr lnasdnkker ldldieafka iekeaplflk vamglsiqst havaelhrik
      121 yripkpkpdt cgivwfdtpk pengemvfgt lyihrakvkn aktsyvaipv tsaikevvel
      181 sktdklhcpy vvhrrparnn niakqcdhry qvtsrmiset fskvrdelgl ysnvekakrp
      241 tfheirrlsa klidemgvnp rqrmahasdr ttqiytdshd vewhevpais vai
//
LOCUS       WP_257969780             567 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257969780
VERSION     WP_257969780.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>567
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          260..350
                     /region_name="tand_rpt_95"
                     /note="tandem-95 repeat; NF012211"
                     /db_xref="CDD:333740"
     Region          <317..565
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
     Region          340..430
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq plpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind tpnakndvit teedtavtid vlvndsdveg dvlsiqsasv pseqgsvdii
      301 dgklvftpae nfngeatity ivtdgdltde akvtvtvtpv ndspvavddt tsiqedtavt
      361 idvltndtdv dgdklsiesa svpkeqgtve vvdgklvftp aenfngdaei tytvtdgelt
      421 deakvtvtvn pvndapiikv davesiteda vntdtvvatl tvrdtdtped qltvslenns
      481 ngyfvlvgde vkltqagvda vnsdelnlkg ltisasvsdg vnptasdsds livnrvndap
      541 tikvdavesi tedavstdtv vatltvr
//
LOCUS       WP_257969787             372 aa            linear   BCT 02-MAR-2025
DEFINITION  NB-ARC domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257969787
VERSION     WP_257969787.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 372)
  AUTHORS   van der Biezen,E.A. and Jones,J.D.
  TITLE     The NB-ARC domain: a novel signalling motif shared by plant
            resistance gene products and regulators of cell death in animals
  JOURNAL   Curr Biol 8 (7), R226-R227 (1998)
   PUBMED   9545207
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013124.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00931.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>372
                     /product="NB-ARC domain-containing protein"
                     /GO_function="GO:0043531 - ADP binding [Evidence IEA]"
     Region          23..>338
                     /region_name="NACHT"
                     /note="Predicted NTPase, NACHT family domain [Signal
                     transduction mechanisms]; COG5635"
                     /db_xref="CDD:444362"
     Region          184..>223
                     /region_name="COG3903"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443109"
     Region          196..>338
                     /region_name="NB-ARC"
                     /note="NB-ARC domain; pfam00931"
                     /db_xref="CDD:395745"
ORIGIN      
        1 msntttvrls cfgiisaied dlralilrtt sdlkdlpldi qdkvvdrfnr enevkpditp
       61 qlgdylnfid fldsqkilhk ikrnqtllke ellificenl eslspcrnrv chsrplestd
      121 ffdlrqfcie llerskdykf seikkvinnl ddraylssig tpavwddkkr nifnnlpmve
      181 fddtgflgrv ddrtsinkll lsdtrvitiv geggigktal aqrclydild icedpskgea
      241 rfdiiawvtl kaneltvnga kqinnaitns iglfqhvnsf lgsgksenid snldeileym
      301 nefnilicid nletistski rnflanipng skiiittrma lgeleyrykl dkldnkssin
      361 lmrtmakiln vp
//
LOCUS       WP_257969828              64 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase HerA domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257969828
VERSION     WP_257969828.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 64)
  AUTHORS   Huang,Q., Liu,L., Liu,J., Ni,J., She,Q. and Shen,Y.
  TITLE     Efficient 5'-3' DNA end resection by HerA and NurA is essential for
            cell viability in the crenarchaeon Sulfolobus islandicus
  JOURNAL   BMC Mol Biol 16, 2 (2015)
   PUBMED   25880130
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 64)
  AUTHORS   Rzechorzek,N.J., Blackwood,J.K., Bray,S.M., Maman,J.D.,
            Pellegrini,L. and Robinson,N.P.
  TITLE     Structure of the hexameric HerA ATPase reveals a mechanism of
            translocation-coupled DNA-end processing in archaea
  JOURNAL   Nat Commun 5, 5506 (2014)
   PUBMED   25420454
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 64)
  AUTHORS   Constantinesco,F., Forterre,P., Koonin,E.V., Aravind,L. and Elie,C.
  TITLE     A bipolar DNA helicase gene, herA, clusters with rad50, mre11 and
            nurA genes in thermophilic archaea
  JOURNAL   Nucleic Acids Res 32 (4), 1439-1447 (2004)
   PUBMED   14990749
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014044.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01935.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..64
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>64
                     /product="helicase HerA domain-containing protein"
     Region          <1..>64
                     /region_name="PRK13873"
                     /note="conjugal transfer ATPase TrbE; Provisional"
                     /db_xref="CDD:237536"
ORIGIN      
        1 mmmctatgnt pfrlnlhvdd vghtlifgpt gagkstllam lvaqmhrypn arvfafdkky
       61 smfa
//
LOCUS       WP_257969851             721 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257969851
VERSION     WP_257969851.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 721)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..721
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=78174
     Region          <27..82
                     /region_name="Cornifin"
                     /note="Cornifin (SPRR) family; pfam02389"
                     /db_xref="CDD:280537"
     Region          <57..265
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          342..416
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); cl02708"
                     /db_xref="CDD:445894"
     Region          601..>675
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllvtslfg cnsdsgssts qppmslpeev lpdepeieap ipelpvpefp diskpevpet
       61 pevtppepse pvipelpvpd kvvsrialnq srvslaegel aqvkvigfyn dgtqddltsq
      121 vvwnvenadi vnidergvit alktgvsvir adldefssem tvqvvdaklt niyfdlphka
      181 iakglsfqak aygeytdkqt rdishlvewd stdcsvvmpg angiftaqde gdadiyaeld
      241 gltsthgsit vtpavlvsmd isstalempl gthkplvvmg tlsdgeqvdl trgitwhvdn
      301 dvveivdnvv kakhkgtalv taasdgvqse piqvqvtdam ltnievttna ssvakgnstl
      361 lsaqgvysde srvelteqva wwvdnqdvlq legdrvkgla vgqamvyatk daitsaplqi
      421 qvtnavleki hvhpseitle eknvqrfyay geysdettqd vthrmtwrss nkavldliag
      481 glsnsaqlgs vtisasfgel kgisevkvve aeekesaisi cpqprsgegs aeaclmvasd
      541 edgrlftapp svklmnklgy elvkplsyda tkpktyvgik tedgtrgpeg dfamfnqygr
      601 eragltsqya nwchdlsvrn fagrdnwrra trnelfslyr asrgsvwdgt esiyeedkdg
      661 ggfgwpanse ywstslmdlp hhegvvydii nlhrgraqlv mdardpayas cvsdapgvpl
      721 k
//
LOCUS       WP_257969861             528 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257969861
VERSION     WP_257969861.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>528
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          248..338
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          340..430
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          425..520
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq plpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellsn
      181 vddedkdtls venliidkgn gilvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnaendvit teedtavtid vlvndsdveg dalsiqsasv pseqgsvdiv
      301 dgklvftpae nfngeatity ivtdgdltde akvsvtvtpv ndspvavddt tsiqedtavt
      361 idvltndtdv dgdklsiesa svpkeqgtve vvdgklvftp aenfngdaei tytvmdgelt
      421 deakvtvtvn pvndvptikv eavesiteda vstdtvvatl tvrdtdtped qltvslenns
      481 ngyfvlvgne vkltqagvda vnndelnlkd ltisasvsdg vnptasds
//
LOCUS       WP_257969894             390 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Vibrio parahaemolyticus].
ACCESSION   WP_257969894
VERSION     WP_257969894.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..390
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=44505
     Region          <141..380
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 melvilaiar frsdqkeams knfvnlaqrl tenghhvvav sptgfcshik veqhtfrdes
       61 ryeslfeglm nliylcreln rlleqtnsak vnlhiatpie llvvffflns ryqkqttlsi
      121 wqsyltleev rnnknyflqn wfkylhlflf nsfvsaplyk slldnfcqai vhskyqklql
      181 ssqsnlpiyf iqngvfsenf srpflakktq kmsllyighs kpskgvdali elaailkkre
      241 cidfdltlcl sgfgdqenie klvskydlqh qtefkenidi svemaradll ilplrtcvgt
      301 sltpnlivea vscglpiaip yfeqlsdviq fgsnaikidl ddleasasai engfklgqld
      361 qmsrnqieqf kvrytlesfv sgytrtlglg
//
LOCUS       WP_257969921              66 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3693 domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257969921
VERSION     WP_257969921.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023888.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12472.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..66
                     /product="DUF3693 domain-containing protein"
                     /calculated_mol_wt=7228
     Region          <3..66
                     /region_name="DUF3693"
                     /note="Phage related protein; cl22943"
                     /db_xref="CDD:451460"
ORIGIN      
        1 mqkkfdrlgl ssisitcael alviaspqep lhqcalwalm lnaiayaypi kclsfegqfn
       61 evsrnd
//
LOCUS       WP_257969931             648 aa            linear   BCT 02-MAR-2025
DEFINITION  PAAR-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257969931
VERSION     WP_257969931.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 648)
  AUTHORS   Santos,M.N.M., Cho,S.T., Wu,C.F., Chang,C.J., Kuo,C.H. and Lai,E.M.
  TITLE     Redundancy and Specificity of Type VI Secretion vgrG Loci in
            Antibacterial Activity of Agrobacterium tumefaciens 1D1609 Strain
  JOURNAL   Front Microbiol 10, 3004 (2020)
   PUBMED   31993035
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 648)
  AUTHORS   Pissaridou,P., Allsopp,L.P., Wettstadt,S., Howard,S.A.,
            Mavridou,D.A.I. and Filloux,A.
  TITLE     The Pseudomonas aeruginosa T6SS-VgrG1b spike is topped by a PAAR
            protein eliciting DNA damage to bacterial competitors
  JOURNAL   Proc Natl Acad Sci U S A 115 (49), 12519-12524 (2018)
   PUBMED   30455305
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025047.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13665.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>648
                     /product="PAAR-like domain-containing protein"
     Region          6..101
                     /region_name="Tox-PAAR-like"
                     /note="Toxin PAAR-like domain; pfam13665"
                     /db_xref="CDD:433390"
     Region          225..307
                     /region_name="FIX_Ntox15_NUC_DUF4112_RhsA-like"
                     /note="Found in type sIX effector (FIX) domain of unknown
                     function co-occurring with Ntox15, endonuclease, or RHS
                     repeat domain; cd20746"
                     /db_xref="CDD:410944"
     Region          502..630
                     /region_name="AHH"
                     /note="A nuclease family of the HNH/ENDO VII superfamily
                     with conserved AHH; pfam14412"
                     /db_xref="CDD:464166"
ORIGIN      
        1 mffpkvgkpi vpipygnnak sadlaggttt ismdggssva vkgstfskst gdaggdkkgv
       61 asgtieaeak fisasptvkf egkgvcrlsd qmtmnkantm clggaqnpsv svteaddgtf
      121 tididyrypd gdpvykadfk iidstgtehv gtlsdkgkgt itglpagsis lflgedkrdi
      181 epiqkpqpnk dylelpgpld lvefagrglv eywdavemps dysqwawgai mgdfnqdrsa
      241 gqiafdsavt aipfidqigd grdisanlya fynaddired kekytdlvit lvgfiptags
      301 likglfkelk ilgkaadldm iaaflragak gdvvkwmqsl dmsvikndiy gqldditkqv
      361 ktlmdtleqe srkrgytvva daykrcveql ddffkkadgp iskvlsdfdd rlkmilpeap
      421 lvtsgtsfsi sagtaqgggk aeviktrnkt kkktdtcplc nkkigkgkke cegakvgsis
      481 kavmddgssq klwkefeirn gwrdktehpw whgagavqah hlipknafkl knakskqtke
      541 kmmflrriaq tcaynidfwk ngvglpnkke tacflrkprh agghdrnefn ytnecvklvh
      601 dklssdikkr tkegscsktt nsslimkfne ssknifdnia dfiwfitr
//
LOCUS       WP_257970007             431 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257970007
VERSION     WP_257970007.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>431
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          248..338
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          340..430
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq prpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvisgs
      241 anldilpind apnakndvit teedtavtid vlvndsdveg dvlsiqsasv pseqgsvdiv
      301 dgklvftpae nfngeatity ivtdgdltde akvtvtvtpv ndspvavddt vstqedtvvt
      361 idvlpndsdv dgdklsiqsa svpeaqgkve ivegklvftp aenfngdaei tytvtdgqlt
      421 deakvtvtvn p
//
LOCUS       WP_257970059             721 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257970059
VERSION     WP_257970059.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 721)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..721
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=77916
     Region          <26..>80
                     /region_name="PRK15313"
                     /note="intestinal colonization autotransporter adhesin
                     MisL"
                     /db_xref="CDD:237940"
     Region          <57..310
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          342..416
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); pfam02368"
                     /db_xref="CDD:396788"
     Region          426..506
                     /region_name="BID_2"
                     /note="Bacterial Ig-like domain 2; smart00635"
                     /db_xref="CDD:214752"
     Region          <611..>675
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllltslfg cnsdsgssts qppmslpeev lpdepeieap ipelpvpefp diskpeapet
       61 pevtppepsd pvipkppvpd kvvsrialnq srvslaegel aqvkvigfyn dgtqddltsq
      121 vvwnvenadi vnidergvit alktgvsvir adldefssem tvqvvdaklt niyfdlphka
      181 iakglsfqak aygeytdkqt rdishlvewd stdcsvvmpg tngiftaqde gdadiyaeld
      241 gltsthgsit vtpavlvsmd isstalempl gthkplvvmg tlsdgeqvdl trgitwhadn
      301 dvveivdnvv kakhkgtalv taaldgvqse piqvqvtdai ltnievttna ssvakgnstq
      361 lsaqgvysde srvelteqva wwvdnqdvlq legarvkgla vgqamvyatk daitsaplqi
      421 qvtnavleki hvhpseitle eknvqrfyay geysdettqd vthrvtwrss nkavldliag
      481 glsnsaqlgs vtisaslgel kgisevkvve aeekesaisi cpqprsgegs veaclmvasd
      541 qdgclftapp svklmnklgy elvkplsyda tkpktyvgik tedgtrgpvg dfamfnqygr
      601 dragltsqya nwchdlsvrn fagrgnwrra trnelfslyr asrgsvwdgt esiyeedkdg
      661 ggfgwpanse ywstslmdlp hhegvvydii nlhrgraqlv mdardpayas cvsdapgvpl
      721 k
//
LOCUS       WP_257970152             206 aa            linear   BCT 02-MAR-2025
DEFINITION  IS66 family transposase [Vibrio parahaemolyticus].
ACCESSION   WP_257970152
VERSION     WP_257970152.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 206)
  AUTHORS   Schwedock,J. and Long,S.R.
  TITLE     An open reading frame downstream of Rhizobium meliloti nodQ1 shows
            nucleotide sequence similarity to an Agrobacterium tumefaciens
            insertion sequence
  JOURNAL   Mol Plant Microbe Interact 7 (1), 151-153 (1994)
   PUBMED   8167368
REFERENCE   2  (residues 1 to 206)
  AUTHORS   Machida,Y., Sakurai,M., Kiyokawa,S., Ubasawa,A., Suzuki,Y. and
            Ikeda,J.E.
  TITLE     Nucleotide sequence of the insertion sequence found in the T-DNA
            region of mutant Ti plasmid pTiA66 and distribution of its
            homologues in octopine Ti plasmid
  JOURNAL   Proc Natl Acad Sci U S A 81 (23), 7495-7499 (1984)
   PUBMED   6095299
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015038.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03050.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..206
                     /product="IS66 family transposase"
                     /calculated_mol_wt=23680
     Region          10..>163
                     /region_name="transpos_IS66"
                     /note="IS66 family transposase; NF033517"
                     /db_xref="CDD:468053"
ORIGIN      
        1 mldldehdkq ypccqhtlhk igedrsekle ftpavlkvle vvrptyacrq ceqsrihqrp
       61 apeiiipksf atesllanii lgkyqyalpl yrqetlftqp gielsrttma rwviqvsekf
      121 kplyqalkth lleqvvvqad etplnvlked kqyytwlycs gadspettlp smkttiktva
      181 relvlwaswv ktlathkvmv tvlmmd
//
LOCUS       WP_257970178             102 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257970178
VERSION     WP_257970178.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 102)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>102
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          <1..>101
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 haivpteksg agielnerer nlyelvakrf ialfypgsvr dkvaldvtct grcyratqtt
       61 lnkqgwevlf kgehqdepnq naldlasltk gtegtctqvd me
//
LOCUS       WP_257970199             156 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257970199
VERSION     WP_257970199.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>156
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
     Region          1..>145
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 manqtiqssa laddeidlgk lfgilidakw fiisitlffa tlgiavalls tpiykadali
       61 qiekkssggi samvgdmgel fsaessatte ieiiksrmil gdtvdkfnlt tiatpdylpf
      121 vgkglaring tqnyislttf evprtargls hqliat
//
LOCUS       WP_257970207             129 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257970207
VERSION     WP_257970207.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 129)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>129
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
     Region          1..>114
                     /region_name="GumC"
                     /note="Exopolysaccharide export protein/domain GumC/Wzc1
                     [Cell wall/membrane/envelope biogenesis]; COG3206"
                     /db_xref="CDD:442439"
ORIGIN      
        1 mngthpnnfq mnkvelirfg hhfktlkkng lsiaaftlif sltctwyiys ktsiyqatat
       61 lliqeeqksa lsieevygvd ttkkeyfqtq iailksnhia dkvinelnlt qhpeftssgg
      121 lkqkiddik
//
LOCUS       WP_257970228             240 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257970228
VERSION     WP_257970228.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>240
                     /product="Ig-like domain-containing protein"
     Region          <7..>227
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          <46..117
                     /region_name="Big_13"
                     /note="Bacterial Ig-like domain; pfam19077"
                     /db_xref="CDD:465968"
ORIGIN      
        1 dgehsytvsv tdkfgntnsk tdsividtka peqttvtvtd tntdsptivg kaevgstvvv
       61 tikgkeyptt idesgnwtvn wtdadklteg tydynivvkd pagntsapat gtfvvdttap
      121 nqaavtitnd ntenptiggt aevgstvivt innqvyqttt ddsgkwsinw ngdkpnsgeh
      181 nysvvvkdsa gnqsqattgt iriqpepvlp pqpdtgedvn kpitfngkav agtnvllmin
//
LOCUS       WP_257970316             696 aa            linear   BCT 02-MAR-2025
DEFINITION  collagenase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257970316
VERSION     WP_257970316.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 696)
  AUTHORS   Lee,C.Y., Su,S.C. and Liaw,R.B.
  TITLE     Molecular analysis of an extracellular protease gene from Vibrio
            parahaemolyticus
  JOURNAL   Microbiology (Reading) 141 (Pt 10), 2569-2576 (1995)
   PUBMED   7582017
REFERENCE   2  (residues 1 to 696)
  AUTHORS   Matsushita,O., Yoshihara,K., Katayama,S., Minami,J. and Okabe,A.
  TITLE     Purification and characterization of Clostridium perfringens
            120-kilodalton collagenase and nucleotide sequence of the
            corresponding gene
  JOURNAL   J Bacteriol 176 (1), 149-156 (1994)
   PUBMED   8282691
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013879.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01752.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>696
                     /product="collagenase"
                     /EC_number="3.4.24.3"
                     /GO_component="GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          82..266
                     /region_name="Peptidase_M9_N"
                     /note="Peptidase family M9 N-terminal; pfam08453"
                     /db_xref="CDD:430004"
     Region          326..607
                     /region_name="Peptidase_M9"
                     /note="Collagenase; pfam01752"
                     /db_xref="CDD:426409"
ORIGIN      
        1 vltgcggdds sggvktvpva gvdsgdkndd nadvdstvdd dtdtdtddds tvdddstkdd
       61 dttdddtvvd ddtelfphkg kctvedftvd rvniesrvan sdyecmrtwf spsleqadvv
      121 fstmsvsrit aglkkaieay kgtkeqaqqi yylgefikaa yknrhdtfak klqpfssels
      181 adiantiqqf lrspyalteg reqqealasm livvdsirql aiaapdvfai ldsfsadksd
      241 syyyrkainn ifvamaghsq tkafydvies dssyihrlsg fitnnewaig tdseqllgna
      301 arelarlvkt edaetkkvvv dtldsllkry plggksdriw vgiaemvday apdyleqlgl
      361 snsksvlkqr imtfsydcrg parilaqemt eaqaitscet lnlkeddfhq tvntgyqpva
      421 ddhsdsvdvi vfktksdyst yssflfdntt nnggqflerd pskqgnvprf vayqngwddd
      481 fsilnlehey vhyldgrfnq ygdfhdtmre gnivwwlegf aeymyykegy naalvlgkek
      541 thtladvfst nysdglnrvy rwgylavrfm iekhpedvte llgysrtgqy kewvkllerl
      601 gpayntefhs wldvvtkdid dsdisqpkpk ekpkkielnt siqvsgkkfs etlffvdvse
      661 synqlevsis gtgdadlyac ydkvchyfey ewsnyt
//
LOCUS       WP_257970419             721 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257970419
VERSION     WP_257970419.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 721)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..721
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=78250
     Region          <83..359
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          342..416
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); pfam02368"
                     /db_xref="CDD:396788"
     Region          430..508
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); cl02708"
                     /db_xref="CDD:445894"
     Region          <611..687
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllvtslfg cnsdsgssts qppmslpeev lpdepeieap ipelpvpefp diskpevpet
       61 pevtppepse pvipeppvpd kvvsritlnq srvslaegel aqvkvigfyn dgtqddltsq
      121 vvwnvenadi vnidergvit alktgvsvir adldefssem tvqvvdaklt niyfdlphka
      181 iakglsfqak aygeytdkqt rdishlvewn stdysvvmpg tngiftaqde gdadiyaeld
      241 gltsthgsit vmpavlvsmd isstalempl gthkplvvmg tlsdgeqvdl trgitwhvdn
      301 dvveivdnvv kakhkgtalv taaldgvqse piqvqvtdai ltnievttna ssvakgnstq
      361 lsaqgvysde srvelteqva wwvdnqdvlq legarvkgla vgqamiyatk daitsaplqi
      421 qvtnavleki hvhpseitle eknvqrfyay geysdettqd vthrvtwrss nkavldliag
      481 glsnsaqlgs vtisaslgel kgtsevkvve seekesaisi cpqprsgegs aeaclmvasd
      541 edgrlftapp svklmnklgy elvkplsyda tkpktyvgik tedgtrgpeg dfamfnqygr
      601 dragltsqya nwchdlsvrn fagrdnwrra trnelfslyr asrgsvwdgt esiyeedkdg
      661 ggfgwpanse ywstslmdlp hyegvvydii nlhrgraqlv mdardpayas cvsdapgvpl
      721 k
//
LOCUS       WP_257970435             221 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF294 nucleotidyltransferase-like domain-containing protein,
            partial [Vibrio parahaemolyticus].
ACCESSION   WP_257970435
VERSION     WP_257970435.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015410.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03445.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>221
                     /product="DUF294 nucleotidyltransferase-like
                     domain-containing protein"
                     /GO_function="GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA]"
     Region          1..87
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
     Site            order(8,19,24..25,28,50,72..74)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:341358"
     Region          50..87
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
     Region          120..>221
                     /region_name="DUF294"
                     /note="Putative nucleotidyltransferase DUF294; pfam03445"
                     /db_xref="CDD:460919"
ORIGIN      
        1 mskkgctcal vtndnalvgm vtetdmtsrv vaeafniyrp vedimnahpq svdqdepvis
       61 alnlmmkhni rnipvldknk qvlglispqe lvqrhgiqav fliekiskcn sleslsllvk
      121 erqavfeami eshlpanvig qvlmmiydaf tcrliklaer nvglppcnya wlaagsharg
      181 evhlgsdqdn alvlddsate sdriyfrhfa myickglaec g
//
LOCUS       WP_257970451              88 aa            linear   BCT 02-MAR-2025
DEFINITION  HEPN domain-containing protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257970451
VERSION     WP_257970451.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 88)
  AUTHORS   Anantharaman,V., Makarova,K.S., Burroughs,A.M., Koonin,E.V. and
            Aravind,L.
  TITLE     Comprehensive analysis of the HEPN superfamily: identification of
            novel roles in intra-genomic conflicts, defense, pathogenesis and
            RNA processing
  JOURNAL   Biol Direct 8, 15 (2013)
   PUBMED   23768067
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037889.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18735.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>88
                     /product="HEPN domain-containing protein"
     Region          16..>65
                     /region_name="HEPN_RiboL-PSP"
                     /note="RiboL-PSP-HEPN; pfam18735"
                     /db_xref="CDD:465851"
ORIGIN      
        1 msqarkefel aisdseelit cydlmnncen kyqppealkr atlimtltaw etyvediase
       61 liaakygmvm gsqvgniien rlndhlkt
//
LOCUS       WP_257970474             788 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257970474
VERSION     WP_257970474.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024487.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13087.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..788
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..788
                     /product="AAA domain-containing protein"
                     /calculated_mol_wt=90053
     Region          <3..599
                     /region_name="DNA2"
                     /note="Superfamily I DNA and/or RNA helicase [Replication,
                     recombination and repair]; COG1112"
                     /db_xref="CDD:440729"
     Region          632..778
                     /region_name="PLDc_yjhR_C_like"
                     /note="C-terminal domain of Escherichia coli
                     uncharacterized protein yjhR and similar proteins;
                     cd09118"
                     /db_xref="CDD:197217"
     Site            order(724,726,739,741,755)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197217"
     Site            724
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197217"
ORIGIN      
        1 mkiveqldfl dqaqahyldr akqafpqqnf tdvtqvkayl laelrqhqnq ldhiqnnwhh
       61 ynrqlndihs rlgdnpqqtl adqqqavsna qalkdnakeq ltawrsylgn estwlnlfkw
      121 lppiknklel qrrsfmfnli ehddeqienl ssdrfesllk qvfsskkddf ydqknryqsw
      181 leqyqefeqs qlnwldsinn ftegspeqti pqltdidsvl dittrfrmfr lavhyweacw
      241 llscrdldqe lnkqarktgl ktvrprwqrr mmltpcivst fhslpshmty qshvgnnefe
      301 tdyllneidl livdeagqva pevaaasfsl akkalvigdi yqippirnvc ssidrgnlkq
      361 hkvissddey tviqeegrsv vtgsvmhvaq qasrfhympe aepgmflqeh rrcydelisy
      421 cndlcyqgil ipkrgqated slyspfshlh vdgiaesfsg srrnkleaet iaawlhankv
      481 eienyygepl akcvgiitpf saqvnqikta cgefdikagk gddqltvgtv hslqgaerki
      541 iifsqvytrh ndggfidmdp smlnvavsra kdaflvfgdl diieaapsss prgllakylf
      601 tdernelefs vgqrpdllqi cghpklltna eehdaflskl lrevqrkidi vspwllldkl
      661 qstgqlellk talhkgvqit ihtdrhfntt vanhpdtnkv kafqhccatl eqlgivinvi
      721 ngvhsksvfa ddrymavgsf nwfsasrsgk yanietsliy vgelekeikt qldflnsrsc
      781 ntnkqpvt
//
LOCUS       WP_257970505             166 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Vibrio
            parahaemolyticus].
ACCESSION   WP_257970505
VERSION     WP_257970505.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 166)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..166
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=19162
     Region          1..159
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mllellhqqk ialiidsiks ddstlvnevi heepnvvvcr kthpringqi ntkqffkekh
       61 cvltdewavn qttnhsqyln nvqvetvass lsgvvlnvie sdniaiipqs famkwkeqld
      121 lqvidlpies nlvtyhfiyh kreknnlhhk lirnniketl kpfyks
//
LOCUS       WP_257970511             115 aa            linear   BCT 02-MAR-2025
DEFINITION  cysteine peptidase family C39 domain-containing protein, partial
            [Vibrio parahaemolyticus].
ACCESSION   WP_257970511
VERSION     WP_257970511.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 115)
  AUTHORS   Havarstein,L.S., Diep,D.B. and Nes,I.F.
  TITLE     A family of bacteriocin ABC transporters carry out proteolytic
            processing of their substrates concomitant with export
  JOURNAL   Mol Microbiol 16 (2), 229-240 (1995)
   PUBMED   7565085
REFERENCE   2  (residues 1 to 115)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015377.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03412.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>115
                     /product="cysteine peptidase family C39 domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          8..115
                     /region_name="Peptidase_C39_likeA"
                     /note="A sub-family of peptidase C39 which contains
                     Cyclolysin and Hemolysin processing peptidases. Peptidase
                     family C39 mostly contains bacteriocin-processing
                     endopeptidases from bacteria. The cysteine peptidases in
                     family C39 cleave the 'double-glycine'...; cd02417"
                     /db_xref="CDD:239098"
ORIGIN      
        1 mdihhhndyg lyaleilaqy hnvsinpeei khkfdingtg ldltswllaa kslelkvkpv
       61 kktverlnfi ylpalvwred ghhfiltkvs kesnkyliyd leqrnprile qaefe
//
LOCUS       WP_257970514             149 aa            linear   BCT 02-MAR-2025
DEFINITION  type VI secretion system baseplate subunit TssK, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257970514
VERSION     WP_257970514.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 149)
  AUTHORS   Basler,M., Pilhofer,M., Henderson,G.P., Jensen,G.J. and
            Mekalanos,J.J.
  TITLE     Type VI secretion requires a dynamic contractile phage tail-like
            structure
  JOURNAL   Nature 483 (7388), 182-186 (2012)
   PUBMED   22367545
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 149)
  AUTHORS   Suarez,G., Sierra,J.C., Sha,J., Wang,S., Erova,T.E., Fadl,A.A.,
            Foltz,S.M., Horneman,A.J. and Chopra,A.K.
  TITLE     Molecular characterization of a functional type VI secretion system
            from a clinical isolate of Aeromonas hydrophila
  JOURNAL   Microb Pathog 44 (4), 344-361 (2008)
   PUBMED   18037263
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017723.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05936.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     gene            1..>149
                     /gene="tssK"
     Protein         1..>149
                     /product="type VI secretion system baseplate subunit TssK"
     Region          1..>149
                     /region_name="T6SS_VasE"
                     /note="Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ,
                     VasE; cl01406"
                     /db_xref="CDD:470190"
ORIGIN      
        1 mrpqhfqqhe raisneykgl hslggsynwg vwncrvkeha lktglieldn lqailpdmtl
       61 idfsattsfl splkvkkgte ntlvkvivpl skvsskmiad psettvsryl lqdldvidnl
      121 tgqdeetiqv aslnielkss neqltglev
//
LOCUS       WP_257969990             478 aa            linear   BCT 02-MAR-2025
DEFINITION  PAAR-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257969990
VERSION     WP_257969990.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 478)
  AUTHORS   Santos,M.N.M., Cho,S.T., Wu,C.F., Chang,C.J., Kuo,C.H. and Lai,E.M.
  TITLE     Redundancy and Specificity of Type VI Secretion vgrG Loci in
            Antibacterial Activity of Agrobacterium tumefaciens 1D1609 Strain
  JOURNAL   Front Microbiol 10, 3004 (2020)
   PUBMED   31993035
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 478)
  AUTHORS   Pissaridou,P., Allsopp,L.P., Wettstadt,S., Howard,S.A.,
            Mavridou,D.A.I. and Filloux,A.
  TITLE     The Pseudomonas aeruginosa T6SS-VgrG1b spike is topped by a PAAR
            protein eliciting DNA damage to bacterial competitors
  JOURNAL   Proc Natl Acad Sci U S A 115 (49), 12519-12524 (2018)
   PUBMED   30455305
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025047.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13665.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..478
                     /product="PAAR-like domain-containing protein"
                     /calculated_mol_wt=50922
     Region          6..101
                     /region_name="Tox-PAAR-like"
                     /note="Toxin PAAR-like domain; pfam13665"
                     /db_xref="CDD:433390"
     Region          <96..176
                     /region_name="COG4253"
                     /note="Uncharacterized conserved protein, DUF2345 family
                     [Function unknown]"
                     /db_xref="CDD:443395"
     Region          226..309
                     /region_name="FIX_Ntox15_NUC_DUF4112_RhsA-like"
                     /note="Found in type sIX effector (FIX) domain of unknown
                     function co-occurring with Ntox15, endonuclease, or RHS
                     repeat domain; cd20746"
                     /db_xref="CDD:410944"
ORIGIN      
        1 mffpkvgkpi vpipygnnak sadlaggttt ismdggnsva ikgstfskst gdaggdkkga
       61 asgtieaeak fisasptvkf egkgvcrlsd qmtmnkantm clggaqnpsv svteeqegty
      121 tvdlylsysd gepvqgatyt ltdqsgevfe gtlddngkas vggvapgefa ieygedsrdf
      181 mpnvptktnp nfnpsanaql iieeakrgev gfwenawtrm sgaaswiwgv ilgdfnddas
      241 veqiiantal tmipvvdqaa dvrdlsanim tllseeerdk penwlalslt lvgcvptfgs
      301 avkgtckval kggkgtskdt llavlrgmgk gdpekflrtl dwvnyakqts qivsdvlkpc
      361 ievatelasy anrmgadelg ayflkladev kiidkmvpdk lkeamgefdk lfarilgkge
      421 ktypakvkhn tgesaqsgkn sakanedkga ktvrcrvckr aiadkrhkkk cvlpgrkk
//
LOCUS       WP_257970520              64 aa            linear   BCT 02-MAR-2025
DEFINITION  CBS domain-containing protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257970520
VERSION     WP_257970520.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 64)
  AUTHORS   Scott,J.W., Hawley,S.A., Green,K.A., Anis,M., Stewart,G.,
            Scullion,G.A., Norman,D.G. and Hardie,D.G.
  TITLE     CBS domains form energy-sensing modules whose binding of adenosine
            ligands is disrupted by disease mutations
  JOURNAL   J Clin Invest 113 (2), 274-284 (2004)
   PUBMED   14722619
REFERENCE   2  (residues 1 to 64)
  AUTHORS   Kemp,B.E.
  TITLE     Bateman domains and adenosine derivatives form a binding contract
  JOURNAL   J Clin Invest 113 (2), 182-184 (2004)
   PUBMED   14722609
REFERENCE   3  (residues 1 to 64)
  AUTHORS   Janosik,M., Kery,V., Gaustadnes,M., Maclean,K.N. and Kraus,J.P.
  TITLE     Regulation of human cystathionine beta-synthase by
            S-adenosyl-L-methionine: evidence for two catalytically active
            conformations involving an autoinhibitory domain in the C-terminal
            region
  JOURNAL   Biochemistry 40 (35), 10625-10633 (2001)
   PUBMED   11524006
REFERENCE   4  (residues 1 to 64)
  AUTHORS   Zhang,R., Evans,G., Rotella,F.J., Westbrook,E.M., Beno,D.,
            Huberman,E., Joachimiak,A. and Collart,F.R.
  TITLE     Characteristics and crystal structure of bacterial
            inosine-5'-monophosphate dehydrogenase
  JOURNAL   Biochemistry 38 (15), 4691-4700 (1999)
   PUBMED   10200156
REFERENCE   5  (residues 1 to 64)
  AUTHORS   Ponting,C.P.
  TITLE     CBS domains in CIC chloride channels implicated in myotonia and
            nephrolithiasis (kidney stones)
  JOURNAL   J Mol Med (Berl) 75 (3), 160-163 (1997)
   PUBMED   9106071
REFERENCE   6  (residues 1 to 64)
  AUTHORS   Bateman,A.
  TITLE     The structure of a domain common to archaebacteria and the
            homocystinuria disease protein
  JOURNAL   Trends Biochem Sci 22 (1), 12-13 (1997)
   PUBMED   9020585
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012780.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00571.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..64
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>64
                     /product="CBS domain-containing protein"
     Region          1..>64
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
ORIGIN      
        1 mskkgctcal vtndnalvgv vtetdmtsrv vaeafniyrp vedimnahpq svdqdepvis
       61 alnl
//
LOCUS       WP_257970557             350 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2971 domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257970557
VERSION     WP_257970557.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022633.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11185.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..350
                     /product="DUF2971 domain-containing protein"
                     /calculated_mol_wt=39953
ORIGIN      
        1 mmlvkyyglv fdsddqswsp radfisnglf ritqpkylnd kgsesrlwpy fnefspadya
       61 wvrkehyklq avpsyvpsne elenfflkpc girygeqiph mlrqegfqsm eeydkerlvi
      121 aaerinsfiv ealscqlgvl slaksdtnel mwthyasegk glavtfdeeh pffsqfppke
      181 vsytadkras ltyykgsiri ngapiknfqv ssfqnsfgvl qsllnngldv aefserllys
      241 kaeqwspede vrivcplils dkkigpqiqp dfgvqlpdel snlfptyaei nlkqipfdaf
      301 esivfgysms eadklkiiel vgknenlshl klrvakhnif gkleavdlvv
//
LOCUS       WP_257970565             203 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Vibrio
            parahaemolyticus].
ACCESSION   WP_257970565
VERSION     WP_257970565.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 203)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..203
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=23383
     Region          7..196
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(13..14,18..19,22,27..33,122..127,133..134,136..137)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176102"
ORIGIN      
        1 mhcpfrfnlr ftaqryflgs lssinnvsvh eavatknlll ellhqqkial iidsiksdds
       61 tlvnevihee pnvvvcrkth pringqintk qffkekhcvl tdewavnqtt nhsqylnnvq
      121 vetvasslsg vvlnviesdn iaiipqsfam kwkeqldlqv idlpiesnlv tyhfiyhkre
      181 knnlhhklir nniketlkpf yks
//
LOCUS       WP_257970530              34 aa            linear   BCT 02-MAR-2025
DEFINITION  RNase H family protein [Vibrio parahaemolyticus].
ACCESSION   WP_257970530
VERSION     WP_257970530.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012304.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00075.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..34
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..34
                     /product="RNase H family protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /calculated_mol_wt=3514
     Region          <2..31
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
ORIGIN      
        1 mrprvsvehv aghsgvkgne hsdclarqaa egkm
//
LOCUS       WP_257970639             187 aa            linear   BCT 02-MAR-2025
DEFINITION  imm11 family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257970639
VERSION     WP_257970639.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 187)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019408.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07791.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..187
                     /product="imm11 family protein"
ORIGIN      
        1 qiayinenfn egeslftsvd srssfyddnd ftptscksei vwkdddiyei ealdlirgga
       61 fnvskpiael imsfdpygve vypakltcsg dgvltdryii avdnlvdvvd ydksikvtdv
      121 ttrfylsdek ikelpdskrh vfkpvgmtkt ffsielfeal vrldeegkis tsivafsfdt
      181 seetprv
//
LOCUS       WP_257968226              81 aa            linear   BCT 02-MAR-2025
DEFINITION  RelA/SpoT AH/RIS domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257968226
VERSION     WP_257968226.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 81)
  AUTHORS   Pausch,P., Abdelshahid,M., Steinchen,W., Schafer,H., Gratani,F.L.,
            Freibert,S.A., Wolz,C., Turgay,K., Wilson,D.N. and Bange,G.
  TITLE     Structural Basis for Regulation of the Opposing (p)ppGpp Synthetase
            and Hydrolase within the Stringent Response Orchestrator Rel
  JOURNAL   Cell Rep 32 (11), 108157 (2020)
   PUBMED   32937119
REFERENCE   2  (residues 1 to 81)
  AUTHORS   Loveland,A.B., Bah,E., Madireddy,R., Zhang,Y., Brilot,A.F.,
            Grigorieff,N. and Korostelev,A.A.
  TITLE     Ribosome*RelA structures reveal the mechanism of stringent response
            activation
  JOURNAL   Elife 5, e17029 (2016)
   PUBMED   27434674
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 81)
  AUTHORS   Magnusson,L.U., Farewell,A. and Nystrom,T.
  TITLE     ppGpp: a global regulator in Escherichia coli
  JOURNAL   Trends Microbiol 13 (5), 236-242 (2005)
   PUBMED   15866041
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040246.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19296.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>81
                     /product="RelA/SpoT AH/RIS domain-containing protein"
     Region          <1..>81
                     /region_name="PRK11092"
                     /note="bifunctional GTP
                     diphosphokinase/guanosine-3',5'-bis pyrophosphate
                     3'-pyrophosphohydrolase"
                     /db_xref="CDD:236843"
ORIGIN      
        1 aawlnyvvts rartkirqvl ktmrreesit lgrrllnhal grhsidsiyp eniqevltdl
       61 rlestddlla aiglgelmsi v
//
LOCUS       WP_257970679             208 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellin hook IN motif-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257970679
VERSION     WP_257970679.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 208)
  AUTHORS   Tasteyre,A., Karjalainen,T., Avesani,V., Delmee,M., Collignon,A.,
            Bourlioux,P. and Barc,M.C.
  TITLE     Molecular characterization of fliD gene encoding flagellar cap and
            its expression among Clostridium difficile isolates from different
            serogroups
  JOURNAL   J Clin Microbiol 39 (3), 1178-1183 (2001)
   PUBMED   11230454
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018853.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07196.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>208
                     /product="flagellin hook IN motif-containing protein"
     Region          <1..208
                     /region_name="PRK08869"
                     /note="polar flagellin E"
                     /db_xref="CDD:236344"
ORIGIN      
        1 vtalndelnr iaettsfggn kllngthgak sfqigadnge avmlelkdmr sdnkmmggvs
       61 yqaesgkgkd wnvaqgkndl kisltdsfgq eqeininaka gddieelaty ingqtdlvka
      121 svdqdgklqi fagnnkvege vsfsgglsge lglgdnkknv tvdtidvtsv ggaqesvaii
      181 daalkyvdsh raelgafqnr fnhaisnl
//
LOCUS       WP_257970769             194 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein, partial
            [Vibrio parahaemolyticus].
ACCESSION   WP_257970769
VERSION     WP_257970769.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>194
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          22..>194
                     /region_name="PRK10789"
                     /note="SmdA family multidrug ABC transporter
                     permease/ATP-binding protein"
                     /db_xref="CDD:182732"
ORIGIN      
        1 mrifwqlrwy frqkwkhyvg sillfavisa lqlvppkavg vivdgvvdnt letntlimwl
       61 lglivllfti ygcrilwriw lfgaswelgt ilrnrlyrhl stqpprffer yktgdlmarg
      121 tndvrnivmt agegvltaad svitgiavli imvtqvswkl tvmallpmpf laviiffivr
      181 ilhqrfrvaq eafs
//
LOCUS       WP_257970772             413 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257970772
VERSION     WP_257970772.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>413
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          248..338
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          340..413
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq plpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnaendvit teedtavtid vlvndsdveg dalsiqsasv pseqgsvdiv
      301 dgklvftpae nfngeatity ivtdgdltde akvsvtvtpv ndspvavddt tsiqedtavt
      361 idvltndtdv dgdklsiesa svpkeqgtve vvdgklvftp aenfngdaei tyt
//
LOCUS       WP_257970777             176 aa            linear   BCT 02-MAR-2025
DEFINITION  MATE family efflux transporter, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257970777
VERSION     WP_257970777.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01554.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..176
                     /product="MATE family efflux transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <2..171
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 gpfeslcysi ffgisvacsv migqslgrda feqaehmakf fikavfvfgi sigallllnr
       61 eliiaalnld npelyplaap avmilccaiw lrmlnmiiin giiraggdnv fclrmdfiam
      121 wmtglplcai aafvlgwefk yvyalmiaee vvklalcyrr ytqkywiknl tvvtts
//
LOCUS       WP_257970779              56 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257970779
VERSION     WP_257970779.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 56)
  AUTHORS   Mittl,P.R. and Schulz,G.E.
  TITLE     Structure of glutathione reductase from Escherichia coli at 1.86 A
            resolution: comparison with the enzyme from human erythrocytes
  JOURNAL   Protein Sci 3 (5), 799-809 (1994)
   PUBMED   8061609
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013086.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00890.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..56
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>56
                     /product="FAD-binding protein"
     Region          25..>56
                     /region_name="FAD_binding_2"
                     /note="FAD binding domain; cl46878"
                     /db_xref="CDD:481218"
ORIGIN      
        1 mectwcannt qgnvvtlawd yksymntnre hecdvlvvgs gaaglslalr vanhck
//
LOCUS       WP_257970800              79 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein, partial
            [Vibrio parahaemolyticus].
ACCESSION   WP_257970800
VERSION     WP_257970800.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>79
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          1..>79
                     /region_name="PRK11176"
                     /note="lipid A ABC transporter ATP-binding
                     protein/permease MsbA"
                     /db_xref="CDD:183016"
ORIGIN      
        1 misllkplld egfgnadsdf lrtlplivfa mmfvrgvsgf isayclswvs gnvvmkirrm
       61 vfnhfmhmpv syfdkeqtg
//
LOCUS       WP_257970812              54 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6363 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257970812
VERSION     WP_257970812.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040073.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19890.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..54
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..54
                     /product="DUF6363 domain-containing protein"
     Region          <2..34
                     /region_name="DUF6363"
                     /note="Domain of unknown function (DUF6363); pfam19890"
                     /db_xref="CDD:466223"
ORIGIN      
        1 filqiapkeg lksssllsep ealehdyqlg lqagfnlvql ydqlnmdleg resa
//
LOCUS       WP_257970826             721 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257970826
VERSION     WP_257970826.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 721)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..721
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=78016
     Region          <83..353
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          342..416
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); cl02708"
                     /db_xref="CDD:445894"
     Region          <611..>675
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllltslfg cnsdsgssts qppmslpeev lpdepeieap ipelpvpefp diskpevpet
       61 pevtppepse pvipeppvpd kvvsrialnq srvslaegel aqvkvigfyn dgtqddltsq
      121 vvwnvenadi vnidergvit alktgvsvir adldefssem tvqvvdaklt niyfdlphka
      181 iakglsfqak aygeytdkqt rdishlvewd stdcsvvmpg tngiftaqde gdadiyaeld
      241 gltsthgsit vtpavlvsmd isstalempl gthkplvvmg tlsdgeqvdl trgitwhvdn
      301 dvveivdnvv kakhkgtalv taasdgvqse piqvqvtdai ltnievttna ssvakgnstl
      361 lsaqgvysde srvelteqva wwvdnqdvlq legarvkgla vgqamvyatk daitsaplqi
      421 qvtnavleki hvhpseitle eknvqrfyay geysdettqd vthrvtwrss nkavldliag
      481 glsnsaqlgs vtisasfgel kgtsevkvve aeekeaaisi cpqprsgegs veaclmvasd
      541 edgrlftapp svklmnklgy elvkplsdda tkpktyvgik tedgtrgpvg dfamfnqygr
      601 dragltsqya nwchdlsvrn fagrdnwrra trnelfslyr asrgsvwdgt esiyeedkdg
      661 ggfgwpanse ywstslmdlp hhegvvydii nlhrgraqlv mdardpayas cvsdapgvpl
      721 k
//
LOCUS       WP_257970843              67 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6037 family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257970843
VERSION     WP_257970843.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 67)
  AUTHORS   Lin,W.S., Cunneen,T. and Lee,C.Y.
  TITLE     Sequence analysis and molecular characterization of genes required
            for the biosynthesis of type 1 capsular polysaccharide in
            Staphylococcus aureus
  JOURNAL   J Bacteriol 176 (22), 7005-7016 (1994)
   PUBMED   7961465
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039331.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19503.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>67
                     /product="DUF6037 family protein"
     Region          <1..67
                     /region_name="DUF6037"
                     /note="Family of unknown function (DUF6037); pfam19503"
                     /db_xref="CDD:466110"
ORIGIN      
        1 mveslsksds edprkiycfs akrnsnnrnr spyndnktri lrpilyskls sdpqvsfnys
       61 ldedkkk
//
LOCUS       WP_257970849             208 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF2726 domain-containing protein [Vibrio harveyi
            group].
ACCESSION   WP_257970849
VERSION     WP_257970849.1
KEYWORDS    RefSeq.
SOURCE      Vibrio harveyi group
  ORGANISM  Vibrio harveyi group
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022337.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10881.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Vibrio harveyi group"
                     /db_xref="taxon:717610"
     Protein         1..208
                     /product="DUF2726 domain-containing protein"
                     /calculated_mol_wt=24041
     Region          78..191
                     /region_name="PDDEXK_nuclease-like"
                     /note="PDDEXK family nucleases; cl40440"
                     /db_xref="CDD:477358"
ORIGIN      
        1 mpellilisl acivylftkk gkkpkrrlne weqgatirrp nsihsfepka venspkivev
       61 plpstgnktn svphkksayl atkterrfyk vlqelipdey vihsqvslma lvqptnfkdn
      121 srtwakrmdy vitdrdtkvl avielddssh rqkkrqerdi yvnnalnghh pllrfearss
      181 ydkthiatvl erdtiikcre lesvlqys
//
LOCUS       WP_257970860             408 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6538 domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257970860
VERSION     WP_257970860.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042623.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20172.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..408
                     /product="DUF6538 domain-containing protein"
                     /calculated_mol_wt=45800
     Region          14..64
                     /region_name="DUF6538"
                     /note="Domain of unknown function (DUF6538); pfam20172"
                     /db_xref="CDD:466323"
     Region          <215..>361
                     /region_name="FimB"
                     /note="Integrase/recombinase, includes phage integrase
                     [Replication, recombination and repair, Mobilome:
                     prophages, transposons]; COG0582"
                     /db_xref="CDD:440347"
ORIGIN      
        1 msnimaspyk hpqtgvyyfr mavpkklvpi igktvfkksl qtknlseakp rfteclsdaq
       61 kqiavaqlkl snssnvelnv rdcaiiaerw yeyvknevdt sgnydlflkr vldaegtvre
      121 fglsdtlsic gnevdtatpd qlqeladelk efivaqldre glvvsshses frqlavafyh
      181 yihriealcr arcnrdygye aisnpiadkp lsvnplankh qpkrkkasqy sisnvfkryh
      241 qseilkdkda kalyeaglqi erlievigdl dvtevtrahi vefrdillql pkskiasirn
      301 rplleqielv kiqgletlsa ttvknclrkt svvfsyaiel giidsnphvg vrvataekkt
      361 easegkatlt qkcvdcsklt clmmlmlvnl mvwlvigflc cadiqvha
//
LOCUS       WP_257970882             112 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6475 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257970882
VERSION     WP_257970882.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040435.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20081.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..112
                     /product="DUF6475 domain-containing protein"
     Region          1..80
                     /region_name="DUF6475"
                     /note="Domain of unknown function (DUF6475); pfam20081"
                     /db_xref="CDD:437913"
ORIGIN      
        1 visdmggwve lckvddresp fkqkefltry qayllrdevg eyprllqgia dhqnqqkgfd
       61 mqapvavgdw skaaqvytrg itdfsavplk rispkaiqal lgnqledkne nd
//
LOCUS       WP_257970893             382 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: replication initiation factor domain-containing
            protein [Vibrio].
ACCESSION   WP_257970893
VERSION     WP_257970893.1
KEYWORDS    RefSeq.
SOURCE      Vibrio
  ORGANISM  Vibrio
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae.
REFERENCE   1  (residues 1 to 382)
  AUTHORS   Li,A.H., Silvestrini,B., Leone,M.G., Giacomelli,S. and Cheng,C.Y.
  TITLE     Cerebrin-50, a human cerebrospinal fluid protein whose mRNA is
            present in multiple tissues but predominantly expressed in the
            lymphoblastoid cells and the brain
  JOURNAL   Biochem Mol Biol Int 35 (1), 135-144 (1995)
   PUBMED   7735128
REFERENCE   2  (residues 1 to 382)
  AUTHORS   Balson,D.F. and Shaw,W.V.
  TITLE     Nucleotide sequence of the rep gene of staphylococcal plasmid pCW7
  JOURNAL   Plasmid 24 (1), 74-80 (1990)
   PUBMED   2270231
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014537.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02486.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Vibrio"
                     /db_xref="taxon:662"
     Protein         1..382
                     /product="replication initiation factor domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /calculated_mol_wt=43368
     Region          1..382
                     /region_name="PHA00202"
                     /note="DNA replication initiation protein"
                     /db_xref="CDD:164786"
ORIGIN      
        1 mttatnilkk fdeqsvhidy lcftfavkdl rhchdavrrl hkheeykgfa ksgllqrhcr
       61 apkfpappvf nptvartsee ieaynkafdi cyrnyledcl riftnqvlgl slsaprglgf
      121 qfytesmklt spdgedfcgf vgiggnndtv hfqingtgck hvfarrpaws lhdwltnvlg
      181 vqtlarvdla yddydgifdc eyaykawrdd cfrtaergrg pvlhedmtia sigkdgkpiy
      241 tkeqysigsr tsriywriyn kaleqklant glvwyrseve lkkwnvdvll npagayaaln
      301 dfaasistak kfntkpvptk raaldllasa hwmrrqygki lnsliefheg dietvvgslv
      361 rdgtkftfpd tygklvthil et
//
LOCUS       WP_257970896              73 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6404 family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257970896
VERSION     WP_257970896.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 73)
  AUTHORS   Hejnova,J., Pages,D., Rusniok,C., Glaser,P., Sebo,P. and
            Buchrieser,C.
  TITLE     Specific regions of genome plasticity and genetic diversity of the
            commensal Escherichia coli A0 34/86
  JOURNAL   Int J Med Microbiol 296 (8), 541-546 (2006)
   PUBMED   17049458
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040085.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19942.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>73
                     /product="DUF6404 family protein"
     Region          1..>71
                     /region_name="DUF6404"
                     /note="Family of unknown function (DUF6404); pfam19942"
                     /db_xref="CDD:437774"
ORIGIN      
        1 mdyetklqla hkelsdkgvw ksnynpplar llrklglcfp ppyyqsffan vmlcvaffap
       61 vwgifqwflv wdd
//
LOCUS       WP_257971040              92 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257971040
VERSION     WP_257971040.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 92)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 92)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>92
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <20..92
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(52,55,75,84)
                     /site_type="active"
                     /db_xref="CDD:271175"
ORIGIN      
        1 mhrrparnnn iakqcdhryq vtsrmisetf skvrdelgly snvekakrpt fheirrlsak
       61 lidemgvnpr qrmahasdrt tqiytdshdv ew
//
LOCUS       WP_257971073             132 aa            linear   BCT 02-MAR-2025
DEFINITION  EpsG family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257971073
VERSION     WP_257971073.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026247.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14897.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>132
                     /product="EpsG family protein"
ORIGIN      
        1 mrqgyaslfi alaifslgrf rfvflviact fhlssivifp lslfiiknks fnklklfila
       61 sifmsvfilv nvkiltsinf snvilvklsy alsgmldsgm mfqsivtnik gllfflvpft
      121 vlvvrrnldk tf
//
LOCUS       WP_257971179             186 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Enterococcus faecium].
ACCESSION   WP_257971179
VERSION     WP_257971179.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..186
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=18351
     Region          <2..>185
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 msvnglnvaa ptatitgnst dgypvtgtaa anaaieilne agdivgstta ddkgaytvtl
       61 dpddvapeea lqvvavvtag gqdyrstgtt lvvpaddved ltetptidsv tagdttiggt
      121 aepgatvtvt lpdgtevtte tddegnwsvn vpelsegdti tvvadsdgkd psdpinvtvg
      181 altvaa
//
LOCUS       WP_257971155             351 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257971155
VERSION     WP_257971155.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>351
                     /product="Ig-like domain-containing protein"
     Region          225..325
                     /region_name="Big_13"
                     /note="Bacterial Ig-like domain; pfam19077"
                     /db_xref="CDD:465968"
ORIGIN      
        1 milnkttqsl vaigltvval vpveaaaaap gdvtfqngga allsnpvtid gviyshsaps
       61 tgkmarynds vdgrdrfgit dsstldnall yhladsgsin apvgdidfrf kstsgdefkl
      121 vsmeagsitd sftvtstlnh vvtitgykdg ssvvsdtidf tqsdssgsvt ltkntnyndg
      181 mltfdsqwgd idevrfttsg qssavtfvii dtidfeqpva stpdtpstpd ldavsdtgss
      241 nsdnitndtt ptfsgtaqsg stvtlysdqv gagataigag tatggnwqit tnelapgith
      301 aisakaadgd dnvssasnvl svtidvaaps vvsittpieg dgkvnaaedn d
//
LOCUS       WP_257971180             134 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Enterococcus faecium].
ACCESSION   WP_257971180
VERSION     WP_257971180.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..134
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=14316
     Region          28..104
                     /region_name="Big_6"
                     /note="Bacterial Ig domain; pfam17936"
                     /db_xref="CDD:465576"
ORIGIN      
        1 mhtllrqyrc clqlrlctpp tasisgnstd gypvigeasa haiieilned neivgkgtan
       61 hagnfmitln penvtagdil rvvaivrvgg kdyrsqatki vvpndesdgi tpngnnlnen
      121 nkdennkflp ktgt
//
LOCUS       WP_257971213             233 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Enterococcus faecium].
ACCESSION   WP_257971213
VERSION     WP_257971213.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 233)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..>233
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          2..>233
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 mktvilaekp sqakayadsf skatrkdgyf eiqdrlfpge tvitygfghl veldspdmyd
       61 enwkqwsleh lpifpthyhy hvpkdkkkqf nvvkqqlqsa dtiiiatdsd regeliawti
      121 iqqagadqgk tfkrlwinsl ekeaiyqgfq qlrdaeetyp kfeeaqarqi adwligmngs
      181 plyslllqqk gipgsfslgr vqtptlymiy qlqekirnfq kepyfegkaq via
//
LOCUS       WP_257971212             112 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257971212
VERSION     WP_257971212.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 112)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..112
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <1..111
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 phtlselgrh qclvgsvdyw hfkenkrdks lrvsgrikcn sgfalvdaak rglglvqlpd
       61 yyvqealdsg elvevltdyr ddregiwaly pqsrnlspkv rllidflaqe la
//
LOCUS       WP_257971218             133 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Enterococcus faecium].
ACCESSION   WP_257971218
VERSION     WP_257971218.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 133)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..>133
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          <5..>129
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 iyqlqekirn fqkepyfegk aqviaqngaf dakldpnetq atqeafeayl kekgvqlgkq
       61 pgtilqvete kksaasprlf slsslqskmn qlmkasakdt leamqglyeg kylsyprtdt
      121 pyitegeyay lld
//
LOCUS       WP_257971250              84 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar phosphate nucleotidyltransferase, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257971250
VERSION     WP_257971250.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 84)
  AUTHORS   Jensen,S.O. and Reeves,P.R.
  TITLE     Domain organisation in phosphomannose isomerases (types I and II)
  JOURNAL   Biochim Biophys Acta 1382 (1), 5-7 (1998)
   PUBMED   9507048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012695.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00483.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>84
                     /product="sugar phosphate nucleotidyltransferase"
                     /GO_function="GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <1..79
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
ORIGIN      
        1 ngdgnritsm vekpiqrffv nagiyvvspr viqsvpknhh idmptlleqh mnerenvlmf
       61 piheywldig rmddfnraqa diht
//
LOCUS       WP_257971258             332 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257971258
VERSION     WP_257971258.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>332
                     /product="ABC transporter substrate-binding protein"
     Region          <18..332
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 fkgekdennd gmpdnfvrkf nfkaeptaap yyldkvkkgk svtfkhvged wwgynnryyk
       61 nrynvekvri tvirdpdiam khfekgnldy femvlpsfwh dktntdvykk gyiqkywgfn
      121 qspqgaggvw mntamplldn levrkgimaa tdfdgmieni mrgdysrkph glgfghgeyd
      181 dpnntppkfd vdaavkhfek agfdtlgsdg irvndkgqrl sfaitygyns wtpriaylke
      241 qaklagleft lnlvdgssaf kyilekkhql aflnmgsgei payweylhsd nankpqtnah
      301 tnysspeldk lieaydaefd qnkryelshq iq
//
LOCUS       WP_257971302             381 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase [Enterococcus faecium].
ACCESSION   WP_257971302
VERSION     WP_257971302.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..381
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=41351
     Region          <2..169
                     /region_name="Peptidases_S8_S53"
                     /note="Peptidase domain in the S8 and S53 families;
                     cl10459"
                     /db_xref="CDD:415849"
ORIGIN      
        1 mnwdvtmvpi rvfgssggts lailteainy asqkgfpiin fsigsvvyss teeaiknypg
       61 lfvaaagnng idmtdkpfyp asldipniit vgnssgyers sdsnysktgv dlfargfrvf
      121 stflgskyty msgtsmatph vtgsaalals ldpdlstdel kkiilnsvds fyelsdlclt
      181 ggrlntnnvv rqvtgkltas nitlrlnsew sdeiakemch vhwidqsgnd ltdqvvvlkn
      241 evdtshfgdy evvfaspdlt dqisvtvtvp rlrkltlgke tatidigsaw dsviaidtfq
      301 vkaiddfrnd vtnqvqvtin adidtinsiq avikfevpel glaqigrlni taknstingl
      361 nevsiehvkk imsfskknld i
//
LOCUS       WP_257971367              32 aa            linear   BCT 02-MAR-2025
DEFINITION  Rid family hydrolase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257971367
VERSION     WP_257971367.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 32)
  AUTHORS   Lambrecht,J.A., Flynn,J.M. and Downs,D.M.
  TITLE     Conserved YjgF protein family deaminates reactive enamine/imine
            intermediates of pyridoxal 5'-phosphate (PLP)-dependent enzyme
            reactions
  JOURNAL   J Biol Chem 287 (5), 3454-3461 (2012)
   PUBMED   22094463
REFERENCE   2  (residues 1 to 32)
  AUTHORS   Thakur,K.G., Praveena,T. and Gopal,B.
  TITLE     Mycobacterium tuberculosis Rv2704 is a member of the
            YjgF/YER057c/UK114 family
  JOURNAL   Proteins 78 (3), 773-778 (2010)
   PUBMED   19899170
REFERENCE   3  (residues 1 to 32)
  AUTHORS   Schmitz,G. and Downs,D.M.
  TITLE     Reduced transaminase B (IlvE) activity caused by the lack of yjgF
            is dependent on the status of threonine deaminase (IlvA) in
            Salmonella enterica serovar Typhimurium
  JOURNAL   J Bacteriol 186 (3), 803-810 (2004)
   PUBMED   14729707
REFERENCE   4  (residues 1 to 32)
  AUTHORS   Morishita,R., Kawagoshi,A., Sawasaki,T., Madin,K., Ogasawara,T.,
            Oka,T. and Endo,Y.
  TITLE     Ribonuclease activity of rat liver perchloric acid-soluble protein,
            a potent inhibitor of protein synthesis
  JOURNAL   J Biol Chem 274 (29), 20688-20692 (1999)
   PUBMED   10400702
REFERENCE   5  (residues 1 to 32)
  AUTHORS   Rappu,P., Shin,B.S., Zalkin,H. and Mantsala,P.
  TITLE     A role for a highly conserved protein of unknown function in
            regulation of Bacillus subtilis purA by the purine repressor
  JOURNAL   J Bacteriol 181 (12), 3810-3815 (1999)
   PUBMED   10368157
REFERENCE   6  (residues 1 to 32)
  AUTHORS   Oka,T., Tsuji,H., Noda,C., Sakai,K., Hong,Y.M., Suzuki,I., Munoz,S.
            and Natori,Y.
  TITLE     Isolation and characterization of a novel perchloric acid-soluble
            protein inhibiting cell-free protein synthesis
  JOURNAL   J Biol Chem 270 (50), 30060-30067 (1995)
   PUBMED   8530410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013228.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01042.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..32
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..32
                     /product="Rid family hydrolase"
     Region          <4..31
                     /region_name="YjgF_YER057c_UK114_family"
                     /note="YjgF, YER057c, and UK114 belong to a large family
                     of proteins present in bacteria, archaea, and eukaryotes
                     with no definitive function. The conserved domain is
                     similar in structure to chorismate mutase but there is no
                     sequence similarity and no...; cl10015"
                     /db_xref="CDD:447879"
ORIGIN      
        1 hevanypars cvevarlpkd vgieieaiav rk
//
LOCUS       WP_257971375             118 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257971375
VERSION     WP_257971375.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 118)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>118
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          1..>118
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            78..111
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 emkaavadva rnteesasqa ndanhrtqlg vretqsmvda igevanviga agdtvseleq
       61 qsnqinvvvd virdiadqtn llalnaaiea aragesgrgf avvadevrtl agrtqdst
//
LOCUS       WP_257971380              86 aa            linear   BCT 02-MAR-2025
DEFINITION  SAM-dependent methyltransferase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257971380
VERSION     WP_257971380.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00590.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>86
                     /product="SAM-dependent methyltransferase"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
     Region          <1..>84
                     /region_name="CysG"
                     /note="Uroporphyrinogen-III methylase (siroheme synthase)
                     [Coenzyme transport and metabolism]; COG0007"
                     /db_xref="CDD:439778"
ORIGIN      
        1 evipgitaai gcsanslipl thrgvarsvt fvtgqvvtga feawsqlmqs gqtlvfymgl
       61 ekssqiqtgl issglrenfl vavith
//
LOCUS       WP_257971382              81 aa            linear   BCT 02-MAR-2025
DEFINITION  glutathione S-transferase N-terminal domain-containing protein,
            partial [Vibrio parahaemolyticus].
ACCESSION   WP_257971382
VERSION     WP_257971382.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024809.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13417.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>81
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /GO_process="GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
     Region          3..>80
                     /region_name="maiA"
                     /note="maleylacetoacetate isomerase; TIGR01262"
                     /db_xref="CDD:273527"
ORIGIN      
        1 mclnlkqlay dsvsvhlvrn ggeqhneqyh dlnaselvpv lvdgdlrlnq slaiiqylee
       61 nypdvsvipe qtplryqala m
//
LOCUS       WP_257971385              76 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein, partial
            [Vibrio parahaemolyticus].
ACCESSION   WP_257971385
VERSION     WP_257971385.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 76)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>76
                     /product="transporter substrate-binding domain-containing
                     protein"
     Region          15..>76
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 gicllmvtqv vhaqsrlqei ldkgvlrvgt tgdwnpmtmk dpatnsyrgf didvttelak
       61 dlgvkveyva tdwktl
//
LOCUS       WP_257971393              69 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar phosphate nucleotidyltransferase, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257971393
VERSION     WP_257971393.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 69)
  AUTHORS   Jensen,S.O. and Reeves,P.R.
  TITLE     Domain organisation in phosphomannose isomerases (types I and II)
  JOURNAL   Biochim Biophys Acta 1382 (1), 5-7 (1998)
   PUBMED   9507048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012695.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00483.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>69
                     /product="sugar phosphate nucleotidyltransferase"
                     /GO_function="GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <2..69
                     /region_name="GalU"
                     /note="UTP-glucose-1-phosphate uridylyltransferase [Cell
                     wall/membrane/envelope biogenesis]; COG1210"
                     /db_xref="CDD:440823"
ORIGIN      
        1 mikddiyrvd dmvekpepgt apsnlaiigr yiltpdifel ientepgkgg eiqitdallk
       61 qakagcvla
//
LOCUS       WP_257971395              68 aa            linear   BCT 02-MAR-2025
DEFINITION  GMC oxidoreductase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257971395
VERSION     WP_257971395.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05199.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>68
                     /product="GMC oxidoreductase"
                     /GO_function="GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
     Region          <1..68
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 rltreilnqp amdefrgdei qpglnittde qidewvkqnv esayhpscsc kmgadddpla
       61 vldeqcqv
//
LOCUS       WP_257971426             721 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257971426
VERSION     WP_257971426.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 721)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..721
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=78132
     Region          <27..82
                     /region_name="Cornifin"
                     /note="Cornifin (SPRR) family; pfam02389"
                     /db_xref="CDD:280537"
     Region          <83..265
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          342..416
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); pfam02368"
                     /db_xref="CDD:396788"
     Region          426..506
                     /region_name="BID_2"
                     /note="Bacterial Ig-like domain 2; smart00635"
                     /db_xref="CDD:214752"
     Region          <611..>675
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllvsslfg cnsdsgsntn qppmslpeev lpdepeieap ipelpvpefp diskpevpet
       61 pevmppepsa pvipelpvpd kvvsrialnq srvslaegel aqvkvigfyn ddtqddltsq
      121 vvwnvenadi vnidergvit avktgvsvir adldefssem tvqvvdaklt niyfdvphka
      181 iakglsfqak aygeytdkqt rdishlvewd stdcsvvmpg tngiftaqde gdadiyaeld
      241 gltsthgsit vtpavlvsmg isstalempl gthkplvvmg tlsdgeqvdl trgitwhvdn
      301 dvveivdnvv kakhkgtalv taaldgvqse piqvqvtdai lanievttna ssvakgnstq
      361 lsaqgvysde srvelteqva wwvdnqdvlq legdrvkgla vgqamvyatk daitsaplqi
      421 qvtnavleki hvhpseitle kknvqrfyay geysdettqd vthrvtwrss nkavldliag
      481 glsnsaqlgs vtisasfgel kgisevkvve aeekesaisi cpqprsgegs veaclmvasd
      541 edgrlftapp svklmnklgy elvkplsyda tkpktyvgik tedgtrgpvg dfamfnqygr
      601 dragltsqya nwchdlsvrn fagrdnwrra trnelfslyr asrgsvwdgt esiyeedkdg
      661 ggfgwpanse ywstslmdlp hhegvvydii nlhrgraqlv mdardpayas cvsdapgvpl
      721 k
//
LOCUS       WP_257971434             136 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257971434
VERSION     WP_257971434.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025052.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13671.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>136
                     /product="AAA family ATPase"
     Region          <1..48
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     Region          70..>135
                     /region_name="pseT"
                     /note="polynucleotide kinase; Provisional; PHA02530"
                     /db_xref="CDD:222856"
ORIGIN      
        1 meafakrqgk emdslrflyd giriqadqtp edldmedndi ieahreqigg tsggggsggg
       61 gsddddkags kkiiltigcp gsgkstware fiaknpgfyn inrddyrqsi maheerdeyk
      121 ytkkkegivt gmqfdt
//
LOCUS       WP_257971182             481 aa            linear   BCT 02-MAR-2025
DEFINITION  MvaI/BcnI family restriction endonuclease [Vibrio
            parahaemolyticus].
ACCESSION   WP_257971182
VERSION     WP_257971182.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 481)
  AUTHORS   Steczkiewicz,K., Muszewska,A., Knizewski,L., Rychlewski,L. and
            Ginalski,K.
  TITLE     Sequence, structure and functional diversity of PD-(D/E)XK
            phosphodiesterase superfamily
  JOURNAL   Nucleic Acids Res 40 (15), 7016-7045 (2012)
   PUBMED   22638584
REFERENCE   2  (residues 1 to 481)
  AUTHORS   Sokolowska,M., Kaus-Drobek,M., Czapinska,H., Tamulaitis,G.,
            Szczepanowski,R.H., Urbanke,C., Siksnys,V. and Bochtler,M.
  TITLE     Monomeric restriction endonuclease BcnI in the apo form and in an
            asymmetric complex with target DNA
  JOURNAL   J Mol Biol 369 (3), 722-734 (2007)
   PUBMED   17445830
REFERENCE   3  (residues 1 to 481)
  AUTHORS   Kaus-Drobek,M., Czapinska,H., Sokolowska,M., Tamulaitis,G.,
            Szczepanowski,R.H., Urbanke,C., Siksnys,V. and Bochtler,M.
  TITLE     Restriction endonuclease MvaI is a monomer that recognizes its
            target sequence asymmetrically
  JOURNAL   Nucleic Acids Res 35 (6), 2035-2046 (2007)
   PUBMED   17344322
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026853.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15515.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..481
                     /product="MvaI/BcnI family restriction endonuclease"
                     /calculated_mol_wt=54634
     Region          234..441
                     /region_name="PDDEXK_nuclease-like"
                     /note="PDDEXK family nucleases; cl40440"
                     /db_xref="CDD:477358"
ORIGIN      
        1 myelnqydhl gindlddvrg llkkhecsia likslpknan dknqvyfhsd asllnsifdl
       61 rfsdrgesss etkrssdpgk lipqaefhhf swldtdgnav kakqckaivy aqypearlsg
      121 fqtvnrempr smsieytkrt dhlprylvlg anrsghafav lvvdpnerfi eqfnqlenyf
      181 gskvckafii dlgddsgtek lkellkanva gktllgcrlk lgetapftgt qvhgytleha
      241 lgiepnadke gdifgielkc ftrkkltlft pepdgglyke sfpdfmttyg ykkndvyrlt
      301 glhraykene ktqltlkiqc fhpivtkgen gkkttrfehg lydpkkpitk qmtgmevvle
      361 drqgkiaasw sierllncwg akhnevvyvp atklpnddpn sladgytfki efpdevlwcl
      421 ntnaerlfqa ihsgtvyldp apkfhptdak qskrrsqwri ndiykassel yeevhfisln
      481 p
//
LOCUS       WP_257971451             896 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Vibrio parahaemolyticus].
ACCESSION   WP_257971451
VERSION     WP_257971451.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 896)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 896)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019348.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07728.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..896
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..896
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=103121
     Region          <331..777
                     /region_name="McrB"
                     /note="5-methylcytosine-specific restriction endonuclease
                     McrBC, GTP-binding regulatory subunit McrB [Defense
                     mechanisms]; COG1401"
                     /db_xref="CDD:441011"
     Region          466..617
                     /region_name="COG4127"
                     /note="Predicted restriction endonuclease, Mrr-cat
                     superfamily [General function prediction only]"
                     /db_xref="CDD:443303"
ORIGIN      
        1 mkveqqmlwd eflsrwpren lsnltleeyv svndtdtfty wletktrelg siqgntsakf
       61 giykrgsegk eqsgighgei ytwrtrygss esevfdyvkk aliqisnaaf kgdletidai
      121 dfaplvkwki aflyqnqasp vlintfskpm levltgntrk vsfpemyqql iaekgsknll
      181 efgeqcwkqa eskrkeieqr hifeqfshie qfnrcaelwt qetidafcsl iqeahsnkld
      241 ifttametga mirigrkeqh airaeevfat feptqkkinf elryehrdty dcsevsddly
      301 rqlrkskqlk kftqqypiar kpywpanyls ddyiddipde sgvaeqgety qmgnltplnq
      361 ilygppgtgk tyhtieaavk aaepsyswds reelkaeydr lisekrirfv tfhqsygyee
      421 fveglravsn qdnqieypiq sgifkqicqd atasainqpa tlkpsakiwk lsidgvkssr
      481 vrdycfannl aaigwgntgd msseertaee qdyfeslgal akssimefsn rmaegdivvc
      541 vkgqwsiqav gvvsgdyqfr eegvedrsdf chvmpvdwla tgldvnlyel ndntrltlkt
      601 cyeltrftsi elyevleksg vklknysqad snpekhrnkq nyvlvidein rgniskvfge
      661 litliepskr kgqaealelt lpysgkpfsv pdnlyiigtm ntadrslamm dtalrrrfdf
      721 iemmpkphll egvvvkgidl qrlldvmnqr ieilydreht lghaffmpvk alveqdkqvl
      781 afselqsvfq nkiiplleey ffedwskirl vladnqksqe iqfikehiqt nqdlnalfgv
      841 khnldqygqs vvkytladka devwcdsdsy isiyskvskt sdedqefkts remvie
//
LOCUS       WP_257971467              78 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257971467
VERSION     WP_257971467.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 78)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>78
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>78
                     /region_name="PRK05506"
                     /note="bifunctional sulfate adenylyltransferase subunit
                     1/adenylylsulfate kinase protein; Provisional"
                     /db_xref="CDD:180120"
ORIGIN      
        1 mshssdliak dieaylkvhe nkdllrfltc gnvddgkstl igrllfdskl iyedqmaaie
       61 kdsqkfnttd eafdlall
//
LOCUS       WP_257971379              49 aa            linear   BCT 02-MAR-2025
DEFINITION  SH3 domain-containing protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257971379
VERSION     WP_257971379.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 49)
  AUTHORS   Kami,K., Takeya,R., Sumimoto,H. and Kohda,D.
  TITLE     Diverse recognition of non-PxxP peptide ligands by the SH3 domains
            from p67(phox), Grb2 and Pex13p
  JOURNAL   EMBO J 21 (16), 4268-4276 (2002)
   PUBMED   12169629
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019278.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07653.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..49
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>49
                     /product="SH3 domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
ORIGIN      
        1 mevvttekhv seypnpfylk qgdkvalgti ddefpnwifi tsvegeqgw
//
LOCUS       WP_257971492              69 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257971492
VERSION     WP_257971492.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>69
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
     Region          1..>66
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 vvlrksgnnr elllfehpla evhlvkgtle qsdisiesaa lreleeesgl ssvsgthylg
       61 swesgfqnh
//
LOCUS       WP_257971490             109 aa            linear   BCT 02-MAR-2025
DEFINITION  histidine kinase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257971490
VERSION     WP_257971490.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 109)
  AUTHORS   Grebe,T.W. and Stock,J.B.
  TITLE     The histidine protein kinase superfamily
  JOURNAL   Adv Microb Physiol 41, 139-227 (1999)
   PUBMED   10500846
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019350.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07730.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>109
                     /product="histidine kinase"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
     Region          <2..108
                     /region_name="PRK10600"
                     /note="nitrate/nitrite two-component system sensor
                     histidine kinase NarX"
                     /db_xref="CDD:182581"
ORIGIN      
        1 dqqllilker ntiarelhds iaqslsclki klsilqmdls nldeeqisii gemreevnva
       61 ycqlrelltt frlrldglgf lpalentvke ynkkigtkin fsyeipank
//
LOCUS       WP_257971499             201 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1430 domain-containing protein, partial [Enterococcus faecium].
ACCESSION   WP_257971499
VERSION     WP_257971499.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018897.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07242.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..201
                     /product="DUF1430 domain-containing protein"
     Region          111..200
                     /region_name="DUF1430"
                     /note="Protein of unknown function (DUF1430); pfam07242"
                     /db_xref="CDD:369281"
ORIGIN      
        1 ndeiltrwnl ekiltnrvrg idsnptlkns tywernilsg eiypplkiki gslskerlfe
       61 lieesqlrdn lqlsfpytqt eeiavkvlsr sfhyliqicf ltffsfflls yvmlciyfvy
      121 ncrkiaifrs sgyslfetyk dffmmnlikw gttsviflfl ierepkylfn ifffsfidfi
      181 lsvvfilste kksqlllmng g
//
LOCUS       WP_257971527             377 aa            linear   BCT 02-MAR-2025
DEFINITION  sodium:solute symporter family transporter, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257971527
VERSION     WP_257971527.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012686.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00474.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>377
                     /product="sodium:solute symporter family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /note="Members of the Solute:Sodium Symporter (SSS), TC
                     2.A.21 as described in tcdb.org, catalyze solute:Na+
                     symport. Known solutes for members of the family include
                     sugars, amino acids, nucleosides, inositols, vitamins,
                     urea or anions, depending on the system.; Members of the
                     Solute:Sodium Symporter (SSS), TC 2.A.21 as described in
                     tcdb.org, catalyze solute:Na+ symport. Known solutes for
                     members of the family include sugars, amino acids,
                     nucleosides, inositols, vitamins, urea or anions,
                     depending on the system.; Members of the Solute:Sodium
                     Symporter (SSS), TC 2.A.21 as described in tcdb.org,
                     catalyze solute:Na+ symport. Known solutes for members of
                     the family include sugars, amino acids, nucleosides,
                     inositols, vitamins, urea or anions, depending on the
                     system."
     Region          <1..377
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
ORIGIN      
        1 mavfwislyi fvnltsvlyl gglaletilg iplmysilgl alfalvysiy gglsavvwtd
       61 viqvfflvlg gfmttymavs figgtdgwfa glskmvdaap ghfemildqs npqymnlpgi
      121 avligglwva nlyywgfnqy iiqrtlaaks vseaqkgivf aaflklivpf lvvlpgiaay
      181 vitsdpqlma slgdiaatnl psaanadkay pwltqflpvg vkgvvfaala aaivsslasm
      241 lnstatiftm diykeyispd sgdhklvnvg rtaavvalii acliapmlgg igqafqyiqe
      301 ytglvspgil avfllglfwk kttskgaiig vvasipfalf lkfmplsmpf mdqmlytllf
      361 tmvviaftsl stsindd
//
LOCUS       WP_257971530             303 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257971530
VERSION     WP_257971530.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>303
                     /product="DUF6531 domain-containing protein"
     Region          124..187
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
ORIGIN      
        1 hkkfdseqsa kaflddfvpl sssrveelyh llgqfppnvp deeltpelya pvfakalvng
       61 slyvasfpkt kknatissep tpvpkqvkak skqnkahtss ktqaknsasa kplqtgsech
      121 ekagdpvslv tgeeiltlnd velpngfvws rtyrsskasr nqglgygwrh afqfelkevt
      181 dekhnvtswe fisdsadeie fepvehgsts yqvyvgasch flnpnirivt lssgdqyrfe
      241 lvediwllkq vrngifstfq lrysrnhrli evahnkrpvl ecqydkqgrl vellnakteq
      301 vlt
//
LOCUS       WP_257971544              62 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3693 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257971544
VERSION     WP_257971544.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023888.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12472.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..62
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..62
                     /product="DUF3693 domain-containing protein"
     Region          <1..62
                     /region_name="DUF3693"
                     /note="Phage related protein; cl22943"
                     /db_xref="CDD:451460"
ORIGIN      
        1 fnglglsgis mactglalvi sspqepllqc alyllmlnai ayaspikcls feglfnevsr
       61 nd
//
LOCUS       WP_257971545            1121 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein [Enterococcus faecium].
ACCESSION   WP_257971545
VERSION     WP_257971545.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1121
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..1121
                     /product="helicase-related protein"
                     /calculated_mol_wt=130923
     Region          289..>666
                     /region_name="RecQ"
                     /note="Superfamily II DNA helicase RecQ [Replication,
                     recombination and repair]; COG0514"
                     /db_xref="CDD:440280"
ORIGIN      
        1 merivlmmtn mkeivrsrie naiikkkekp flivfkgipd eylpvdfgtr lvdsslffpl
       61 dkidvehvrt ktfsemvskn nkstqffwit feeycvleni ltiafeirii ennlyltkfp
      121 yrgtlsdied iytrfyydnd emiqeskqke yetvasfygd idfssetnsy yvtyhvvdtd
      181 eievvslfen eeeynfndqv fsdetltady sielsddelp fldltellts kqkdtgvief
      241 ilttdfrels nnylgrinil qnvisprvnf vftektikrk eikrlpeyle ilksywgysg
      301 fkdlemylni esrdrktvli sqaqiiddiv nqadaaitgk dyqdiyitsa tgsgksimfq
      361 ipalfmrerf stekpltlii spliglmndq vesmekrgik naarihsntp pykrdkilnd
      421 vaegnvdlly lspetlqsrs dismligerk iglviideah ivttwgksfr adywylgiyl
      481 sklrkkqrfp ivtftataiy ggkddmymdt rdslnmekpi ayfgkvkrdd ivmcidssgk
      541 sfnkagkdyr kakyqlawdn lkrakklrqk tlmyfptvrl lrefknflel ndpsiadvtg
      601 myygpmdkee kdevlksfks gdirfvlatk afgmgidipd itnvyhfapt gnvvdyiqei
      661 grvardhslv kqgyawfdyl sndfsevnkl qgmgaikkeq ivevmrkiis iykskglsrn
      721 livnadefry ifskdlddpt aldnkiktvm lmiekdfssp kkigyspfva rprslfgneq
      781 ilvkehsesv llnsrlkpff tkicelensn ykyvysvdva giwekyfkqm tfpqfkfslf
      841 neskrreldy ssifkhftfa tgitvpsvnq keyskivssy nallnsferf creksriekf
      901 fnikelgsfi qkdfpsmdvf karsvaqviv navfdfgkik glrffhertd kngnssykiv
      961 gqidrfidai kyglskfyhe srnryedski lsvyfyrgnd nssideaili lglgqsldil
     1021 dyevssgfnp qiyirinsiy plekaiktgd hyrnylledv hrrhrmsvem ltylftykae
     1081 grlkseriqn ytdffwekie dyflgiipkd veerlytkdk d
//
LOCUS       WP_257971552             237 aa            linear   BCT 02-MAR-2025
DEFINITION  SpaA isopeptide-forming pilin-related protein, partial
            [Enterococcus faecium].
ACCESSION   WP_257971552
VERSION     WP_257971552.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 237)
  AUTHORS   Kang,H.J., Paterson,N.G., Gaspar,A.H., Ton-That,H. and Baker,E.N.
  TITLE     The Corynebacterium diphtheriae shaft pilin SpaA is built of tandem
            Ig-like modules with stabilizing isopeptide and disulfide bonds
  JOURNAL   Proc Natl Acad Sci U S A 106 (40), 16967-16971 (2009)
   PUBMED   19805181
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2009 Oct 27;106(43):18427]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037639.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17802.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..>237
                     /product="SpaA isopeptide-forming pilin-related protein"
     Region          <61..96
                     /region_name="CollagenBindB"
                     /note="Repeat unit of collagen-binding protein domain B;
                     cl15753"
                     /db_xref="CDD:417766"
     Region          <85..>235
                     /region_name="ClfA"
                     /note="Clumping factor A-related surface protein, MSCRAMM
                     (microbial surface components recognizing adhesive matrix
                     molecules) family, DEv-IgG fold [Cell
                     wall/membrane/envelope biogenesis]; COG4932"
                     /db_xref="CDD:443959"
ORIGIN      
        1 drpdqvtfei qrehttnaaa wkngyiriik pakdttnswe radidklsan sgesyqeils
       61 lpqynnqgqa fsyqtikelp vpgydsqqid amtwkntkqf tplnlkitkn sstgeknlig
      121 avfkltgdsi dtlltdhgdg tyslpenvkl qkemtytlte tkapeghgls kkttweikia
      181 sdgtvtidgk tvttsddtiq ltienpfvev pvavrkyamq gtdkeinlkg aafslqk
//
LOCUS       WP_257971508             721 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257971508
VERSION     WP_257971508.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 721)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..721
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=78176
     Region          <27..76
                     /region_name="Cornifin"
                     /note="Cornifin (SPRR) family; pfam02389"
                     /db_xref="CDD:280537"
     Region          <57..265
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          342..416
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); cl02708"
                     /db_xref="CDD:445894"
     Region          <611..>675
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllvtslfg cnsdsgssts qppmslpeev lpdepeieap ipelpvpefp diskpevpet
       61 pevtppepsd pvipeppvpd kvvsrialnq srvslaegel aqvkvigfyn ddtqddltsq
      121 vvwnvenadi vnidergvit alktgvsvir adldefssem tvqvvdaklt niyfdlphka
      181 iakglsfrak aygeytdkqt rdishlvewd stdcsvvmpg tngiftaqde gdadiyaeld
      241 gltsthgsit vtpavlvsmd isstalempl gthkplvvmg tlsdgeqvdl srgitwhvdn
      301 dvveivdnvv kakhkgtalv taaldgvqse piqvqvtdai ltnievttna ssvakgnstl
      361 lsaqgvysde srvelteqva wwvdnqdvlq legarvkgla vgqamiyatk daitsaplqi
      421 qvtnavleki hvhpseitle eknvqrfyay geysdettqd vthrvtwrss nkavldliag
      481 glsnsaqlgs vtisasfgel kgisevkvve aeekesaisi cpqprsgegs veaclmvasd
      541 edgrlftapp svklmnklgy elvkplsyda tkpktyvgik tedgtrgpvg dfamfnqygr
      601 dragltsqya nwchdlsvrn fagrdnwrra trnelfslyr asrgsvwdgt esiyeedkdg
      661 ggfgwpanse ywstslmdlp hhegvvydii nlhrgraqlv mdardpayas cvsdapgvpl
      721 k
//
LOCUS       WP_257971670             689 aa            linear   BCT 02-MAR-2025
DEFINITION  SLBB domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257971670
VERSION     WP_257971670.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 689)
  AUTHORS   Burroughs,A.M., Balaji,S., Iyer,L.M. and Aravind,L.
  TITLE     A novel superfamily containing the beta-grasp fold involved in
            binding diverse soluble ligands
  JOURNAL   Biol Direct 2, 4 (2007)
   PUBMED   17250770
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022007.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10531.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..689
                     /product="SLBB domain-containing protein"
                     /calculated_mol_wt=75236
     Region          1..173
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          200..249
                     /region_name="SLBB"
                     /note="SLBB domain; pfam10531"
                     /db_xref="CDD:463136"
     Region          <289..368
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          <382..461
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          <476..570
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          <578..665
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
ORIGIN      
        1 mmcvlawvtp lhaaendtvk vgdlvqinlp geaslnqgfq vdrrgrinlp eigpvfvagy
       61 neqqlqdvii etlktvyrdv nnarvfikqq qllvsvqgyv vkpgeytlpa gsniqmfvye
      121 agglragaql dkmivkrgdq niefdykrfl dtgdnsqlpk lesldvlfvp asplvgnieq
      181 efdaaklans gdsadsarai kvfgevnapg sftykpnttl vdvvmraggv tryasveqir
      241 vitnntptmf nlktyldtgd qsllpeilpg atifvpkqee eikaganvvy imgevahpga
      301 yegkqgasfm dilanaggpt ryaesrqirv ikadgqvikf dltahtegls svappkvsag
      361 daifvpektd fnekswlkva psravavmge vvrpgriews demdlidlla hvggptrrad
      421 tskievanng qmtnvdldqy ildgspasnl prvsagtvvr vhalpddpsd nksqwvsqss
      481 dasiyvfgqi napgryrftd emhfldilsa adgptmdadi hnirvthrgl gyakvsklnl
      541 smyfetgdes ilpnvrpgdt iyipeknknw ldrskestvr vlgevrdpgr yvfndnmtvl
      601 dllaeaggpt nsaylekisi vnmsccqgqa rtfdlvnfsk taniydlpvi ragdtiyiph
      661 kdesfaekar aglrdilqit ttivligal
//
LOCUS       WP_257971730              90 aa            linear   BCT 02-MAR-2025
DEFINITION  IS3 family transposase, partial [Enterococcus faecium].
ACCESSION   WP_257971730
VERSION     WP_257971730.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024729.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13333.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..90
                     /product="IS3 family transposase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <23..86
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 ivippaiffy ystlfdsrfk tlqqnhsace gffgrlknem fyqrdwkntt inqfinkldd
       61 yihwynnqri klslgglspl qyrkkqryic
//
LOCUS       WP_257971743             217 aa            linear   BCT 02-MAR-2025
DEFINITION  SinI family restriction endonuclease [Vibrio parahaemolyticus].
ACCESSION   WP_257971743
VERSION     WP_257971743.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 217)
  AUTHORS   Steczkiewicz,K., Muszewska,A., Knizewski,L., Rychlewski,L. and
            Ginalski,K.
  TITLE     Sequence, structure and functional diversity of PD-(D/E)XK
            phosphodiesterase superfamily
  JOURNAL   Nucleic Acids Res 40 (15), 7016-7045 (2012)
   PUBMED   22638584
REFERENCE   2  (residues 1 to 217)
  AUTHORS   Jeltsch,A. and Pingoud,A.
  TITLE     Horizontal gene transfer contributes to the wide distribution and
            evolution of type II restriction-modification systems
  JOURNAL   J Mol Evol 42 (2), 91-96 (1996)
   PUBMED   8919860
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021111.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09570.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..217
                     /product="SinI family restriction endonuclease"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0009036 - type II site-specific
                     deoxyribonuclease activity [Evidence IEA]"
                     /GO_process="GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /calculated_mol_wt=25011
     Region          <49..202
                     /region_name="RE_SinI"
                     /note="SinI restriction endonuclease; pfam09570"
                     /db_xref="CDD:312916"
ORIGIN      
        1 mdehlrrved llstkyssyd rpdgleyvlk aaqyydalal sdidkwlnky lngyknrksv
       61 tqgnptntyd ddindtiina irsdinmnti neaskllkrs qmaignllee ylaeelathg
      121 wymawgetvk stdlvsnkne rlqvknrnnt enssssqvrn gtdiikwhrl nanngakywd
      181 slveltrcrt lseerfksfi ervvknnnev lfipscl
//
LOCUS       WP_257971754             145 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257971754
VERSION     WP_257971754.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024898.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13508.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..145
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
     Region          <49..128
                     /region_name="ElaA"
                     /note="Predicted N-acyltransferase, GNAT family [General
                     function prediction only]; COG2153"
                     /db_xref="CDD:441756"
ORIGIN      
        1 algqfggive lnitklapnv gefmrlrskv gwinperriv qksldnsifh vcvytesqla
       61 gygrivgdgy myfyiqdvvv dpnyqnqgig klvmqeieqf lknnahpgat iallaacgke
      121 kfyskfgysc rtgnplglgm ckfve
//
LOCUS       WP_257971759             469 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257971759
VERSION     WP_257971759.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>469
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..247
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          250..340
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          342..432
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq plpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellsn
      181 vddedkdkdt lsvenliidk gngtlvdngd gtwtftpqid ddtevsftfd iiddedlvvs
      241 gsanldilpi ndapnaendv itteedtavt idvlvndsdv egdalsiqsa svpseqgsvd
      301 ivdgklvftp aenfngeati tyivtdgdlt deanvtvtvt pvndspvavd dttsiqedta
      361 vtidvltndt dvdddklsie sasvpkeqgt vevvdgklvf tpaenfngda eitytvtdge
      421 ltdeakvtvt vnpvndapti kvdavesite davstdtvia tlevadtdt
//
LOCUS       WP_257971781             148 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-binding protein [Vibrio parahaemolyticus].
ACCESSION   WP_257971781
VERSION     WP_257971781.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13460.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..148
                     /product="NAD(P)H-binding protein"
                     /calculated_mol_wt=16003
     Region          3..>148
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(8,10..11,13,33..35,73..75,100..102,124,128,147..148)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187577"
     Site            order(78,102,124,128)
                     /site_type="active"
                     /db_xref="CDD:187577"
ORIGIN      
        1 mrkvlilgan gqiatwvvkm laeqqdieqt lfvrdpgkls ftlpanaqli vgdalnpkgl
       61 yeaikghdiv yanlagevdv qaknivsamd kagvkrlifv nslgiykevp gkfgvwnqne
      121 igkylgpyra aadtieasdl dytilraa
//
LOCUS       WP_257971789             721 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257971789
VERSION     WP_257971789.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 721)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..721
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=78057
     Region          <26..>80
                     /region_name="PRK15313"
                     /note="intestinal colonization autotransporter adhesin
                     MisL"
                     /db_xref="CDD:237940"
     Region          <57..353
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          342..416
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); cl02708"
                     /db_xref="CDD:445894"
     Region          426..506
                     /region_name="BID_2"
                     /note="Bacterial Ig-like domain 2; smart00635"
                     /db_xref="CDD:214752"
     Region          <611..>675
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllvtslfg cnsdsgssts qppmslpeev lpdepeieap ipelpvpefp diskpeapet
       61 pevtppepsd pvipeppvpd kvvsrialnq srvslaegel aqvkvigfyn dgtqddltsq
      121 vvwnvenadi vnidergvit alktgvsvir adldefssem tvqvvdaklt niyfdlphka
      181 iakglsfqak aygeytdkqt rdishlvewd stdcsvvmpg tngiftaqde gdadiyaeld
      241 gltsthgsit vtpavlvsmg isstalempl gthkplvvmg tlsdgeqvdl trgitwhvdn
      301 dvveivdnvv kakhkgtalv taasdgvqse piqvqvtdai ltnievttna ssvakgnstl
      361 lsaqgvysde srvelteqva wwvdnqdvlq legdrvkgla vgqamvyatk daitsaplqi
      421 qvtnavleki hvhpseitle kknvqrfyay geysdettqd vthrvtwrss nkavldliag
      481 glsnsaqlgs vtisasfgel kgisevkvve aeekesaisi cpqprsgegs aeaclmvasd
      541 edgrlftapp svklmnklgy elvkplsyda tkpktyvgik tedgtrgpeg dfamfnqygr
      601 dragltsqya nwchdlsvrn fagrdnwrra trnelfslyr asrgsvwdgt esfyeedkdg
      661 ggfgwpanse ywstslmdlp hhegvvydii nlhrgraqlv mdardpayas cvsdapgvpl
      721 e
//
LOCUS       WP_257971804             546 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257971804
VERSION     WP_257971804.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>546
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          248..338
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          <317..543
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
     Region          340..430
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq prpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnakndvit teedtavtid vlvndsdveg dvlsiqsasv pseqgsvdiv
      301 dgklvftpae nfngeatity ivtdgdltde anvtatvtpv ndspvavddt vstqedtvvt
      361 idvltndtdv dgdklsiesa svpkeqgtve vvdgklvftp aenfngdaei tytvtdgqlt
      421 deakvtvtvn pvndvptikv davesiteda vntdtvvatl tvrdtdtped qltvslenns
      481 ngyfvlvgne vkltqagvda vnndelnlkd ltisasvsdg vnptasdsds livnrvndap
      541 tvenai
//
LOCUS       WP_257971831             512 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4357 domain-containing protein, partial [Enterococcus faecium].
ACCESSION   WP_257971831
VERSION     WP_257971831.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025625.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14267.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..512
                     /product="DUF4357 domain-containing protein"
     Region          <24..387
                     /region_name="GmrSD"
                     /note="DNAse/DNA nickase specific for phosphorothioated or
                     glycosylated phage DNA, GmrSD/DndB/SspE family, contains
                     DUF262 and HNH nuclease domains [Defense mechanisms];
                     COG1479"
                     /db_xref="CDD:441088"
     Region          254..386
                     /region_name="DUF1524"
                     /note="Protein of unknown function (DUF1524); pfam07510"
                     /db_xref="CDD:462188"
     Region          451..504
                     /region_name="DUF4357"
                     /note="Domain of unknown function (DUF4357); pfam14267"
                     /db_xref="CDD:433823"
ORIGIN      
        1 tvtlipngih hppiedgrll pnsvklddrd naqqifesin stgerltasd lirnfimmdk
       61 sneeqttlyt kywrrleevf dnskgmedff ryylaaitge ysakhilyqa fkdywhkerd
      121 vssdaellqk lvryagyfar lyynkpegky sevlsdfqsm esmmpapfvl glsewyyhdq
      181 fitedqyida ikvvndyqlr ryfngddtsr vskafpsylk svrkyakang yenivdiviy
      241 vlvtrnqsnn malpsdkalk snllnanaya mrlarwllek ienrensatl dmsnlsiehi
      301 mpqtstsywe ekagtsgeey tglvntignl tlvtnpdnsa agnkdfetkk kifedtlhir
      361 mnkdlyelte wtssdisars ealinelitm ypylrssgdy ehdgnreifl eaqgikatgy
      421 lnedetviih sgseiyskik diasdsldet rqelldngii eetigglqfv qdytassvsn
      481 aaalllggsr ngwdywkydn gisindslrn kk
//
LOCUS       WP_257971843              38 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3693 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257971843
VERSION     WP_257971843.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023888.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12472.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..38
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>38
                     /product="DUF3693 domain-containing protein"
     Region          <1..>37
                     /region_name="DUF3693"
                     /note="Phage related protein; cl22943"
                     /db_xref="CDD:451460"
ORIGIN      
        1 makkfdrlgl snisitcael alviaspqep lyqcalci
//
LOCUS       WP_257971859              64 aa            linear   BCT 02-MAR-2025
DEFINITION  rhodanese-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257971859
VERSION     WP_257971859.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 64)
  AUTHORS   Gliubich,F., Gazerro,M., Zanotti,G., Delbono,S., Bombieri,G. and
            Berni,R.
  TITLE     Active site structural features for chemically modified forms of
            rhodanese
  JOURNAL   J Biol Chem 271 (35), 21054-21061 (1996)
   PUBMED   8702871
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00581.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..64
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..64
                     /product="rhodanese-like domain-containing protein"
     Region          <1..59
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            29
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238089"
ORIGIN      
        1 legainipvd qlrhrmselp kdkeiviycq vglrgnvayr qlvnngykar nliggyrtyl
       61 hskv
//
LOCUS       WP_257971865            1608 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257971865
VERSION     WP_257971865.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040192.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19078.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..1608
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>1608
                     /product="Ig-like domain-containing protein"
     Region          1368..1467
                     /region_name="Big_12"
                     /note="Bacterial Ig-like domain; pfam19078"
                     /db_xref="CDD:436946"
     Region          1476..>1608
                     /region_name="tail_200_repeat"
                     /note="tandem large repeat; NF032891"
                     /db_xref="CDD:467960"
ORIGIN      
        1 isqanpklde daifdseges idkeapkqtl tietgretmv gnkryvagev vskivledps
       61 givektgnap tfksmwyaqs tpntaiplel ridesgnsnk frkeylftln tqstdlidii
      121 kfalettavd tqgnaytdln pyietlyvdn dypaatyipp ndlegnpige diylnansvh
      181 eltfklqdlv gdqldkrsls fvdlsngttv dytsdqfssn tqdsfkvklc tgtlcasqgk
      241 vvypgdgnwt vnvnaednlg nfvnrqttns pkfnilidse gpivnggtin krlggnsswv
      301 pdiswgnlsp gsvvevdmkt efgkritlqh yeteptdsve pylfgeqpni evrliagafk
      361 yeetnsfyvk akdsaypqae stsefvfqvd nkgpvielae pwivdknsag nyvlgpdfqv
      421 kltsviddsk vsnvelwqqa gdaairsivp rdptqpfeme igriqsdsit idankranlf
      481 ikaideygfe sqteprtiii drdgptltln gfnsesyyrg nyvfslsaqd lsetgtpssn
      541 gvnkttleyw sfidtpsdtg tqvdedmkvs legqndgdss trtiklrgsd vrgnatevdy
      601 aikvqnklpt ihsvsfsyed gtpitgglvt rndpvvitld aedasgipqi dgtyrygdqt
      661 nniqfsedet gkwkgrltsa elsqdgsyel kfkvynnvly nsgetrpvae rsesinvqre
      721 gvvlsvaqpe nfqahisgkt lsvefnpvgd vkartlecwv renytsseap ndglsnaysg
      781 vitnpqesyk csvttdvnms tapvvlitrt vgqndtetvs kfsfnmmdie apaaledtyl
      841 ftgnevefda dgnkmlsltl sfkdnlsgvn tgptkrpllv rnrfnitfep kscsvsagvt
      901 tctyterysd iiatgvsqhl ytiknlsdma gntssdhsle lllpppgsvd igitsptdds
      961 iirgaqlvmn fkvkvgaqsi lenviatvdg dsynlndhpg nfsrfndcge gyscstfeap
     1021 lsatldgqvi kpsiqaidvw gdsssdnvsv mvdnskpiid sdavvsespt dsslvrfqfs
     1081 irdegsgias vkyttvnpsh vfnkeenadn shlyfelpks elqglnqirv sieatdkvgw
     1141 sesktvdidv svptitvsfn gmtslqggkl aftkesqlfn vtskeghdvk asnysidlvp
     1201 stgdtlnfsg nivsstgsdt mvfdaedqte ymykvtvtds igrsitdfel fsttygakgi
     1261 tsivdyelpa isgvsadqvs mtptdgkydl dvtayvadkn lssvtstadn gsgvkvgpqs
     1321 vtepasvgdp yvmhysltpg tytiqvtald lanhktekst satvkaatvp eltistasps
     1381 psaggveipl tftfseevke fsfsdvklea sdkneagelq qvswntsdni twtatyttpe
     1441 kqnkeiiirv dddsyesvns ipgkgdslil evegvlptls kvtfdpkhqa igqsvnitle
     1501 fdkevqeata klgnndvtsl vatankkiwt graevpnipe lnvglvvsky kdlignmged
     1561 dssnampitp tlaitpvgnv dssnavalqi tgtssrfdgq tvsveika
//
LOCUS       WP_257971872              39 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3693 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257971872
VERSION     WP_257971872.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023888.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12472.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..39
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>39
                     /product="DUF3693 domain-containing protein"
     Region          <1..39
                     /region_name="DUF3693"
                     /note="Phage related protein; cl22943"
                     /db_xref="CDD:451460"
ORIGIN      
        1 makkfdrlgl ssisitcael alviaspqep lyqcalwal
//
LOCUS       WP_257971879              92 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257971879
VERSION     WP_257971879.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 92)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>92
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          1..>92
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 nsyiaywlap eiiqyfsena pnieltiedw neltpdrinn qlvhfgihyf plnlnknlvq
       61 rkvgkdmsvm vcrkdhpinn esisletias yp
//
LOCUS       WP_257971895            1217 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257971895
VERSION     WP_257971895.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 1217)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 1217)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 1217)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 1217)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..1217
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..1217
                     /product="ATP-binding protein"
     Region          49..235
                     /region_name="HisJ"
                     /note="ABC-type amino acid transport/signal transduction
                     system, periplasmic component/domain [Amino acid transport
                     and metabolism, Signal transduction mechanisms]; COG0834"
                     /db_xref="CDD:440596"
     Region          265..475
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Region          <644..1181
                     /region_name="PRK15347"
                     /note="two component system sensor kinase"
                     /db_xref="CDD:237951"
ORIGIN      
        1 lrkiiiltat vtslavsfna lakentkdsi vvgvitqsds snsvvdsvgp fyginldyls
       61 niakvlglnl elrayqhipp llndvengvi dgavgfsktp erekrflfsk pffsstiaaw
      121 yrdasykdrd irdikwvcve gsvycdnlts qgidniiyvk trleafddvr rgkanaliyt
      181 yvgiteylda ndivkgivdi pnwlqeeevs fiasldnqkl idnidkilew eqsgknirsv
      241 asknpyhind kllvayrrnh ksnltityss sdeaypflyr dshtgkldgf fpdfidliqs
      301 rtglafsyvk ptsslsnglt afdadivpvs yvgpvpksdw litkpfmhsn yvsiqaeese
      361 rdksspekag illslkkqgl vhlgvwqqdr fdryddlkql ladlksgvld vayipddvvh
      421 smiaqdqvdg lvineqdvlt fsnafavakh ntqlqhmlns iietidsnei ekllrshrsf
      481 nlvygyddeq makfflagav afslmfaaay filahlrlkv klaelnanne eaekqwlmgi
      541 iqeinslvfi hgednqlems ncanykskqc qecklkscst naplvnnsde latviggqri
      601 seevasagce lgikhvyrer ktiaspsgkk kfvltviqdi tqqkereqal idaqkeaqta
      661 vrarenflat mshelrtpls aahgildlln rqvtadsnre liaqamrsln hlnvlvdevl
      721 dyskleagql tvapaktdll ktlcdvfrsf epralakgld ykvtikpfsd afieidalrl
      781 vqittnllsn avkftaegei gisvilhekq lilkvadtgi gmtdgqlegi lnpfvqadds
      841 itrkyggtgl glsivdrlie cmggvlcids qfglgttitv klpieccdse pevclnwtys
      901 ealplsirqw cdawkmqpat larsmanlya aqdneagfdg vmlrddreil gsltlrelqy
      961 pdalfnllsq tqqetkldel kseevswilg tvlvaednpi nqsvismqlr elgiepvivn
     1021 ngreaweyin qdenvvlllt dfhmpemdgy elikhvrasg fkslpiigvt aedarlaner
     1081 tqdigiddvl ykpydlnklk tvlvpfigkk ektrlpdwik rfktqdakei arvfsqsmam
     1141 dienlqaast erdkkrvihg ikgavgaigi smltelciea ervtaaefdr raaelilrie
     1201 qeidnidywa emneyta
//
LOCUS       WP_257971910             186 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257971910
VERSION     WP_257971910.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..186
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          4..>125
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(6,10,12..18,93..94,99..102,108..109,111..112)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176102"
ORIGIN      
        1 tlldfsevfp nvdlvvvtkp sfilgnyike gkidlalgnp yhktnndfni delfhvncww
       61 vthedlasvt sppsqrvllm dgceellnls niasynlwrl ddlgtildlc kaqrgmaflp
      121 eflieknmke nklkiitdrp dffgkrvvas lfwsvhsdfd lfnqwikgel qtcvskkqtf
      181 iadltq
//
LOCUS       WP_257971896             721 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257971896
VERSION     WP_257971896.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 721)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..721
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=78032
     Region          <83..353
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          342..416
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); cl02708"
                     /db_xref="CDD:445894"
     Region          <611..>675
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllvtslfg cnsdsgssts qppmslpeev lpdepeieap ipelpvpefp diskpevpet
       61 pevtppepse pvipeppvpd kvvsrialnq srvslaegel aqvkvigfyn dgtqddltsq
      121 vvwnvenadi vnidergvit alktgvsvir adldefssem tvqvvdaklt niyfdlphka
      181 iakglsfqak aygeytdkqt rdishlvewd stdcsvvmpg tngiftaqde gdadiyaeid
      241 gltsthgsit vtpavlvsmd isstalempl gthkslvvmg tlsdgeqvdl trgitwhvdn
      301 dvveivdnvv kakhkgtavv taaldgvqse piqvqvtdai ltnievttna ssvakgnstl
      361 lsaqgvysde srvelteqva wwvdnqdvlq legarvkgla vgqamiyatk daitsaplqi
      421 qvtnavleki hvhpseitle eknvqrfyay geysdettqd vthrvtwrss nkavldliag
      481 glsnsaqlgs vtisaslgel kgisevkvve aeekesaisi cpqprsgegs aeaclmvasd
      541 edgrlftapp svklmnklgy elvkplsyda tkpktyvgik tedgtrgpvg dfamfnqygr
      601 dragltsqya nwchdlsvrn fagrdnwrra trnelfslyr asrgsvwdgt esiyeedkdg
      661 ggfgwpanse ywstslmdlp hhegvvydii nlhrgraqlv mdardpayas cvsdapgvpl
      721 k
//
LOCUS       WP_257971920             721 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257971920
VERSION     WP_257971920.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 721)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..721
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=78078
     Region          <83..265
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          342..416
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); pfam02368"
                     /db_xref="CDD:396788"
     Region          426..506
                     /region_name="BID_2"
                     /note="Bacterial Ig-like domain 2; smart00635"
                     /db_xref="CDD:214752"
     Region          <611..>675
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllvtslfg cnsdsgssts qppmslpeev lpdepeieap ipelpvpefp diskpevpet
       61 pevtppepse pvipeppvpd kvvsrialnq srvslaegel aqvkvigfyn ddtqddltsq
      121 vvwnvenadi vnidergvit alktgvsvir adldefssem tvqvvdaklt niyfdlphka
      181 iakglsfqak aygeytdkqt rdishlvewd stdcsvvmpg tngiftaqde gdadiyaeld
      241 gltsthgsit vtpavlvsmg isstalempl gthkplvvmg tlsdgeqvdl trgitwhvdn
      301 dvveivdnvv kakhkgtalv taaldgvqse piqvqvtdai lanievttna ssvakgnstq
      361 lsaqgvysde srvelteqva wwvdnqdvlq legarvkgla vgqamvyatk daitsaplqi
      421 qvtnavleki hvhpseitle eknvqrfyay geysdettqd vthrvtwrss nkavldliag
      481 glsnsaqlgs vtisaslgel kgisevkvve aeekesaisi cpqprsgegs veaclmvasd
      541 edgrlftapp svklmnklgy elvkplsyda tkpktyvgik tedgtrgpvg dfamfnqygr
      601 dragltsqya nwchdlsvrn fagrdnwrra trhelfslyr asrgsvwdgt esiyeedkdg
      661 ggfgwpanse ywstslmdlp hhegvvydii nlhrgraqlv mdardpayas cvsdapgvpl
      721 k
//
LOCUS       WP_257971949             158 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257971949
VERSION     WP_257971949.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 158)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>158
                     /product="AMP-binding protein"
     Region          <1..157
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
ORIGIN      
        1 mpaktikywl dkhpnahysn lygpteitvd ctyydvpsdw dgdslpigip chnsgilild
       61 endqrndege lcvrgsslal gywansekte evfcqnplqd kyidmiyrtg dlvrlvdgli
      121 yyigrkdfqi khngyrielg eiesqimelg aveqcvvg
//
LOCUS       WP_257971955             133 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257971955
VERSION     WP_257971955.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 133)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>133
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          1..>133
                     /region_name="PRK07064"
                     /note="thiamine pyrophosphate-binding protein"
                     /db_xref="CDD:180820"
ORIGIN      
        1 lgvaltstga gagnavgsmi eamnacspml hitgqvekay ldmdagfihe tadqlgflrs
       61 sskqafrvht peqavatlhk aiqvaqtapc gpvsieipid iqsaqvplsl lsaplsvptl
      121 paicssqiea iwd
//
LOCUS       WP_257971968              54 aa            linear   BCT 02-MAR-2025
DEFINITION  aconitase family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257971968
VERSION     WP_257971968.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012550.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00330.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..54
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..54
                     /product="aconitase family protein"
     Region          <1..52
                     /region_name="Aconitase"
                     /note="Aconitase catalytic domain; Aconitase catalyzes the
                     reversible isomerization of citrate and isocitrate as part
                     of the TCA cycle; cl00285"
                     /db_xref="CDD:469706"
ORIGIN      
        1 nndrlnpger castsnrnfe grqgragrth lvspamaaaa ainghfadvr diqi
//
LOCUS       WP_257971975              50 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Vibrio parahaemolyticus].
ACCESSION   WP_257971975
VERSION     WP_257971975.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00528.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..50
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..50
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=5612
     Region          <1..50
                     /region_name="TM_PBP2"
                     /note="Transmembrane subunit (TM) found in Periplasmic
                     Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
                     transporters which generally bind type 2 PBPs. These types
                     of transporters consist of a PBP, two TMs, and two
                     cytoplasmic ABC ATPase subunits, and...; cl00427"
                     /db_xref="CDD:444901"
ORIGIN      
        1 mgrwlieglq rrdypvvqgg vllvatliif vnlvvdllyg ivnprirhkk
//
LOCUS       WP_257972036             721 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257972036
VERSION     WP_257972036.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 721)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..721
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=78141
     Region          <27..76
                     /region_name="Cornifin"
                     /note="Cornifin (SPRR) family; pfam02389"
                     /db_xref="CDD:280537"
     Region          <57..310
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          342..416
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); pfam02368"
                     /db_xref="CDD:396788"
     Region          <611..>675
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllvtslfg cnsdsgssts qppmslpeev lpdepeieap ipelpvpefp diskpevpet
       61 pevtppepsd pvipeppvpd kvvsrialnq srvslaegel aqvkvigfyn dgtqddltsq
      121 vvwnvenadi vnidergvit alktgvsvir adldefssem tvqvvdaklt niyfdvphka
      181 iakglsfqak aygeytdkqt rdishlvewd stdcsvvmpg ingiftaqde gdadiyaeld
      241 gltsthgsit vtpavlvsmd isstalempl gthkslvvmg tlsdgeqvdl trgitwhvdn
      301 dvveivdnvv kakhkgtalv taaldgvqse piqvqvtdai ltnievttna ssvakgnstq
      361 lsaqgvysde srvelteqva wwvdnqdvlq legdrvkgla vgqamvyatk daitsaplqi
      421 qvtnavleki hvhpseitle eknvqrfyay geysdettqd vthrvtwrss nkavldliag
      481 glsnsaqlgs vtisasfgel kgtsevkvve seekesaisi cpqprsgegs veaclmvasd
      541 edgrlftapp svklmnklgy elvkplsyda tkpktyvgik tedgtrgpvg dfamfnqygr
      601 dragltsqya nwchdlsvrn fagrdnwrra trnelfslyr asrgsvwdgt esiyeedkdg
      661 ggfgwpanse ywstslmdlp hhegvvydii nlhrgraqlv mdardpayas cvsdapgvpl
      721 k
//
LOCUS       WP_257972047             155 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257972047
VERSION     WP_257972047.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 155)
  AUTHORS   Xiong,Y. and Eickbush,T.H.
  TITLE     Origin and evolution of retroelements based upon their reverse
            transcriptase sequences
  JOURNAL   EMBO J 9 (10), 3353-3362 (1990)
   PUBMED   1698615
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00078.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..155
                     /product="reverse transcriptase domain-containing protein"
     Region          <1..102
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 pvsplisnsy lydfdvfisd fcssynitys rysddltfgg ddksdleaii givkkslsef
       61 nlnikdnktr llsenntqiv tgvainngvl rpsrrfrktv raifhnalvt esvgsilmls
      121 gylhylksfe sgetphnika yediieklks kyvsv
//
LOCUS       WP_257971868             107 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6058 family natural product biosynthesis protein, partial
            [Vibrio parahaemolyticus].
ACCESSION   WP_257971868
VERSION     WP_257971868.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 107)
  AUTHORS   Qin,Z., Munnoch,J.T., Devine,R., Holmes,N.A., Seipke,R.F.,
            Wilkinson,K.A., Wilkinson,B. and Hutchings,M.I.
  TITLE     Formicamycins, antibacterial polyketides produced by Streptomyces
            formicae isolated from African Tetraponera plant-ants
  JOURNAL   Chem Sci 8 (4), 3218-3227 (2017)
   PUBMED   28507698
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039336.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19531.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..107
                     /product="DUF6058 family natural product biosynthesis
                     protein"
     Region          7..103
                     /region_name="DUF6058"
                     /note="Family of unknown function (DUF6058); pfam19531"
                     /db_xref="CDD:437363"
ORIGIN      
        1 lkgskcevat pglneiimed wehflqgtyg lctqtglped iaakgfaveq ikallerdvl
       61 dsneikrley fvnlldnass lfapherlns srhrlvnevr rkyklqs
//
LOCUS       WP_257972099             305 aa            linear   BCT 02-MAR-2025
DEFINITION  Imm49 family immunity protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257972099
VERSION     WP_257972099.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 305)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026913.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15575.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>305
                     /product="Imm49 family immunity protein"
     Region          <1..83
                     /region_name="PoNe_DUF637"
                     /note="Polymorphic Nuclease effector (PoNe) co-occurring
                     with an N-terminal DUF637 domain; cd20739"
                     /db_xref="CDD:410648"
     Region          178..>304
                     /region_name="Imm49"
                     /note="Immunity protein 49; pfam15575"
                     /db_xref="CDD:434794"
ORIGIN      
        1 mvylveepdp geiiiveakg gssplgsrki gneayqqgts kyaaeivklm senkegttek
       61 laadeiqyaa fsgrpiryih ieasilesgk asdvklevae fkfipkdqsk mqskesvkiv
      121 erkanpeldt qaivnrkkfi nrvldnrkdg lkirrenlvs lgdfainqvr wytwfqashe
      181 deqvctlrly etslmgacyh rlamypkepl siqilgypev twdgegilkt gficpsmwld
      241 ayftpvivrd rpsmdvlanf pislmkqsst kagelsymlv dviqsfhnrt sdypdklvaa
      301 mdaav
//
LOCUS       WP_257972125             124 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257972125
VERSION     WP_257972125.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 124)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>124
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
     Region          1..>124
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
ORIGIN      
        1 mreleklkfd pnkdivyslg dltdrgkenl qclelinedw fkamlgnhdl fmllflitge
       61 negslpgrmw fsprtggawf kdlnsaqkdr vrelaqilsl kpsarqvdih hsngltrfgl
      121 vhae
//
LOCUS       WP_257972126             113 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257972126
VERSION     WP_257972126.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 113)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>113
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          3..>93
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            23..29
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
ORIGIN      
        1 mlsnnqskvt khrdghalis aapgsgkttt lahtihcmfk dgfsdkdmli lmfgkdaseh
       61 faeklaslsa eygykgdipt irtyhslcfr tlqalekkgv ipphklitfe kar
//
LOCUS       WP_257972130              90 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase family 25 protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257972130
VERSION     WP_257972130.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 90)
  AUTHORS   Campbell,J.A., Davies,G.J., Bulone,V. and Henrissat,B.
  TITLE     A classification of nucleotide-diphospho-sugar glycosyltransferases
            based on amino acid sequence similarities
  JOURNAL   Biochem J 326 (Pt 3) (Pt 3), 929-939 (1997)
   PUBMED   9334165
  REMARK    Erratum:[Biochem J 1998 Feb 1;329(Pt 3):719]
REFERENCE   2  (residues 1 to 90)
  AUTHORS   Jennings,M.P., Hood,D.W., Peak,I.R., Virji,M. and Moxon,E.R.
  TITLE     Molecular analysis of a locus for the biosynthesis and
            phase-variable expression of the lacto-N-neotetraose terminal
            lipopolysaccharide structure in Neisseria meningitidis
  JOURNAL   Mol Microbiol 18 (4), 729-740 (1995)
   PUBMED   8817494
REFERENCE   3  (residues 1 to 90)
  AUTHORS   Gotschlich,E.C.
  TITLE     Genetic locus for the biosynthesis of the variable portion of
            Neisseria gonorrhoeae lipooligosaccharide
  JOURNAL   J Exp Med 180 (6), 2181-2190 (1994)
   PUBMED   7964493
REFERENCE   4  (residues 1 to 90)
  AUTHORS   Cope,L.D., Yogev,R., Mertsola,J., Latimer,J.L., Hanson,M.S.,
            McCracken,G.H. Jr. and Hansen,E.J.
  TITLE     Molecular cloning of a gene involved in lipooligosaccharide
            biosynthesis and virulence expression by Haemophilus influenzae
            type B
  JOURNAL   Mol Microbiol 5 (5), 1113-1124 (1991)
   PUBMED   1956289
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013882.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01755.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>90
                     /product="glycosyltransferase family 25 protein"
     Region          2..>87
                     /region_name="COG3306"
                     /note="Glycosyltransferase involved in LPS biosynthesis,
                     GR25 family [Cell wall/membrane/envelope biogenesis]"
                     /db_xref="CDD:442535"
ORIGIN      
        1 meaidsstpn flysersnna ltrkrfgyrl veneiacfss hhlawekcle vnepilvled
       61 ncdllpeffd vlshfdtlae qydflklaat
//
LOCUS       WP_257972140              83 aa            linear   BCT 02-MAR-2025
DEFINITION  SdpI family protein, partial [Enterococcus faecium].
ACCESSION   WP_257972140
VERSION     WP_257972140.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 83)
  AUTHORS   Ellermeier,C.D., Hobbs,E.C., Gonzalez-Pastor,J.E. and Losick,R.
  TITLE     A three-protein signaling pathway governing immunity to a bacterial
            cannibalism toxin
  JOURNAL   Cell 124 (3), 549-559 (2006)
   PUBMED   16469701
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025015.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13630.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..83
                     /product="SdpI family protein"
ORIGIN      
        1 drsrnasigf rtkrslsskk nwvysqtify ggivlislls stlyslniid vstsnsisii
       61 giiiaaiitq lflvfgekkr skk
//
LOCUS       WP_257972207             151 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257972207
VERSION     WP_257972207.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 151)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 151)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025054.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13673.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>151
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
     Region          2..151
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
     Site            order(82..84,94..95)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
ORIGIN      
        1 mlsirsyrad daptlwtlfy htvrevncrd yqtdqvkawa pddfepktwq armdtitpfi
       61 aeiegeivgy adlqpdgfid hffchhqhqr tgvgralmah ifsqaeslal pylysevsit
      121 arpffermgf kvikhqevev rgqhltnyvm k
//
LOCUS       WP_257972153             480 aa            linear   BCT 02-MAR-2025
DEFINITION  PAAR-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257972153
VERSION     WP_257972153.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 480)
  AUTHORS   Santos,M.N.M., Cho,S.T., Wu,C.F., Chang,C.J., Kuo,C.H. and Lai,E.M.
  TITLE     Redundancy and Specificity of Type VI Secretion vgrG Loci in
            Antibacterial Activity of Agrobacterium tumefaciens 1D1609 Strain
  JOURNAL   Front Microbiol 10, 3004 (2020)
   PUBMED   31993035
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 480)
  AUTHORS   Pissaridou,P., Allsopp,L.P., Wettstadt,S., Howard,S.A.,
            Mavridou,D.A.I. and Filloux,A.
  TITLE     The Pseudomonas aeruginosa T6SS-VgrG1b spike is topped by a PAAR
            protein eliciting DNA damage to bacterial competitors
  JOURNAL   Proc Natl Acad Sci U S A 115 (49), 12519-12524 (2018)
   PUBMED   30455305
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025047.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13665.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..480
                     /product="PAAR-like domain-containing protein"
                     /calculated_mol_wt=51194
     Region          6..101
                     /region_name="Tox-PAAR-like"
                     /note="Toxin PAAR-like domain; pfam13665"
                     /db_xref="CDD:433390"
     Region          <96..176
                     /region_name="COG4253"
                     /note="Uncharacterized conserved protein, DUF2345 family
                     [Function unknown]"
                     /db_xref="CDD:443395"
     Region          226..309
                     /region_name="FIX_Ntox15_NUC_DUF4112_RhsA-like"
                     /note="Found in type sIX effector (FIX) domain of unknown
                     function co-occurring with Ntox15, endonuclease, or RHS
                     repeat domain; cd20746"
                     /db_xref="CDD:410944"
ORIGIN      
        1 mffpkvgkpi vpipygnnak sadlaggttt ismdggnsva ikgstfskst gdaggdrkgv
       61 tsgtieaeak fisasptvkf egkgvcrlsd qmtmnkantm clggaqnpsv svtedqegty
      121 tvdlylfysd gepvqgatyt lkdqsgavfe gtldnngkas vggvvpgefa ieygedsrdf
      181 mpnvptktnp nfnpsanaql iieetkkgev gfwenawtrm sgaaswiwgv ilgdfnddas
      241 veqiiantal tmipvvdqaa dirdlsanim tllseeerdk penwlalslt lvgcvptfgs
      301 avkgtckval kggkgtskdt llavlrgmgk gdpekflrtl dwmdyakqts qivsdvlkpc
      361 ievatelasy anrmgadelg ayflkladev kiidkmvpdk lkeamgefdk lfarilgkge
      421 ktypakvkhn tgesaqsgkn aakaneekdk kpvrckickr vagksegqcv dalrtkgktk
//
LOCUS       WP_257972210            1464 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257972210
VERSION     WP_257972210.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024487.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13087.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1464
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..1464
                     /product="AAA domain-containing protein"
                     /calculated_mol_wt=165657
     Region          2..>56
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Region          <14..>142
                     /region_name="TIGR00376"
                     /note="DNA helicase, putative"
                     /db_xref="CDD:273041"
     Site            19..25
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          395..1239
                     /region_name="DNA2"
                     /note="Superfamily I DNA and/or RNA helicase [Replication,
                     recombination and repair]; COG1112"
                     /db_xref="CDD:440729"
     Region          1257..1354
                     /region_name="MTES_1575"
                     /note="REase_MTES_1575; pfam18741"
                     /db_xref="CDD:465853"
ORIGIN      
        1 msalidvmkg knlviegppg tgksqtitni laaamaqgks vlfvaekqaa levvkrrmdk
       61 aglgdfcldl hsdgakkrlv lddfnqrian spsfkystae yerqveryer areklqnyaq
      121 minsewkhtg ltiheilmaa tryssecsnl kfqdvapddl tgntfnrvil dekidqltqf
      181 ydylqrvsqq lddsdnwcsh pwygatnkal sgvepedvvr qlqqwdcslt nwlkelveqc
      241 isfdvhpdyd lmkaeafvss wadipapked elftaieeit pesleeldgy lalyqsiaeg
      301 ygqlrkhfvk dvienldsve dielamrgla elgvdrtlgf selaktlnsl qvaidtcaki
      361 divrsemaph lpqaaqhllg csrqglneld tfvclacelp panlslrnel wdseelayel
      421 gsleqrvqal sdekrtlses ldtealpsve llkryaeayr nkglfswlsp awreakkavs
      481 vfkksgsyss qdiavllera atwseesnsf lndtkfrsll qehfqgvetd vakirsmvew
      541 yqkvraeygi gfgrrvplaq alfslpsefi rginalnsdg lrqqidsfsq alrrlalvyp
      601 rmavfaeedv dftsdskple nakveiekkl fscqrflvda nmsqellweg itsakqlgsr
      661 vksflnqgld ekyfgnavll svpvsghvsp elsritatmd fveelydrcs spdiislvkq
      721 csniesiael rqvgskleal mgraqydesv ffeqvggnre qwfecsgfel khvierneka
      781 issgewldgw ikylfakarm ekggysrlnq ylsqsscsle qaqnalkfat yqmlareiyk
      841 erpeltqmsg heqaaiqqqf akydeelksl qrkrvaalas erhipsgtrg akvasyteda
      901 lldheikkkt rhisirnlvt ragstlvgyk pcfmmspmav akyippgsit fdivvmdeas
      961 qvrpqdalsc fargkqivvv gdskqlppts ffektvsnda eddqedvgvi ddaesildav
     1021 sdhfqkrqlk whyrsrhesl iafsnhrfyd sslvvfpspw gqsdefgikf nrvpegqfln
     1081 svnhgeshav vaairehlls ksseslgvva mnskqrdyie adlerligkd kllreayeln
     1141 qrsddplfvk nlenvqgder dvifisftyg pqekgaanip qrfgpinsas gwrrlnvlft
     1201 rakkriqiys smtadqivln ensslgvtsl kgylkyaqhg qlighdgvqq kepdsdfeis
     1261 vmdvlarkgf ecvpqvgvsg ffidiavrdp gmpgryimgi ecdgatyhss kstrdrdrvr
     1321 qgvleglgwn irriwstdwf khpeaelkpi veelkrlstp ikqqastesi pevkekpveq
     1381 lshkaaktle ealtryklvi ekkypntkph ekllrpdmie hlimdrpmth eeftlrvpay
     1441 lrqntstkea adylddvlei itny
//
LOCUS       WP_257972248             282 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF72 domain-containing protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257972248
VERSION     WP_257972248.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014017.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01904.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..282
                     /product="DUF72 domain-containing protein"
     Region          1..272
                     /region_name="DUF72"
                     /note="Protein of unknown function DUF72; cl00777"
                     /db_xref="CDD:469916"
ORIGIN      
        1 rlgltmwshn qwqqsfygsg tkpaerleky aqvfhtvegn ttfyatpthn tvqnwkaath
       61 ddfkftfklp kaitheqmlr gcdeqlrdfm kimeplherv gqwtiqlpaa fgsehldqlk
      121 kfcasfppnf plgvevrhma ffskgveera lnqwlvengi driimdsrpv faakpdneai
      181 idaqmkkpkv pvhaiatash pmirfighpe eqqnydffvp wlsklpqwia egkqpyvmih
      241 tadniiapel aaniyknlqk yvalpdlapf pandgnsqlq mf
//
LOCUS       WP_257972271             230 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257972271
VERSION     WP_257972271.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>230
                     /product="ABC transporter substrate-binding protein"
     Region          1..>230
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 aseeavyggt yrtyiesfpq tlrsvgpdan sglrqylmdg tpkmaqrhpn tgkwipqlak
       61 swafgednkt vyfklddtak wsdgekitad dyvfmmqyyt skdiidpwyn dfftnsivsv
      121 ekiddytirv nlavaqshds lmvminmpsn gfqprpkhff kgekdenndg mpdnfvrkfn
      181 fkaeptaapy yldkvkkgks vtfkhvgedw wgynnryykn rynvekvrit
//
LOCUS       WP_257972291             345 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257972291
VERSION     WP_257972291.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..345
                     /product="ABC transporter substrate-binding protein"
     Region          <1..293
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 ritvirdpdi amkhfekgnl dyfemvlpsf whdktntdvy kkgyiqkywg fnqspqgagg
       61 vwmntampll dnlevrkgim aatdfdgmie nimrgdysrk phglgfghge yddpnntppk
      121 fdvdaavkhf ekagfdtlgs dgirvndkgq rlsfaitygy nswtpriayl keqaklagle
      181 ftlnlvdgss afkyilekkh qlaflnmgsg eipayweylh sdnankpqtn ahtnysspel
      241 dklieaydae fdqnkryels hqiqeyvkea niivpgymvp ysrvahwrwv kipkdgmtka
      301 tewvlhpmdi gnfwideavk ketekamksg ksfpevtvid drykl
//
LOCUS       WP_257972308              83 aa            linear   BCT 02-MAR-2025
DEFINITION  oligosaccharide flippase family protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257972308
VERSION     WP_257972308.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024832.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13440.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>83
                     /product="oligosaccharide flippase family protein"
     Region          <4..82
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 mvvlissaia qvllrdlsrf sphdnkltsg gvyshavkil ffpllffgyv lsplvfdvlf
       61 gyewkeavvy skyisilcim fly
//
LOCUS       WP_257972328             338 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramidase domain-containing protein [Vibrio
            parahaemolyticus].
ACCESSION   WP_257972328
VERSION     WP_257972328.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 338)
  AUTHORS   Rodriguez-Rubio,L., Gerstmans,H., Thorpe,S., Mesnage,S., Lavigne,R.
            and Briers,Y.
  TITLE     DUF3380 Domain from a Salmonella Phage Endolysin Shows Potent
            N-Acetylmuramidase Activity
  JOURNAL   Appl Environ Microbiol 82 (16), 4975-4981 (2016)
   PUBMED   27287318
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023288.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11860.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..338
                     /product="N-acetylmuramidase domain-containing protein"
                     /calculated_mol_wt=37013
     Region          58..117
                     /region_name="PGRP"
                     /note="Peptidoglycan-binding (PGRP) domain of
                     peptidoglycan hydrolases [Cell wall/membrane/envelope
                     biogenesis]; COG3409"
                     /db_xref="CDD:442635"
     Region          165..331
                     /region_name="Muramidase"
                     /note="N-acetylmuramidase; pfam11860"
                     /db_xref="CDD:432137"
ORIGIN      
        1 mldgvlhscp kllkllsndi flslighdkl lqnvkggtfv vsirlsgsvg lggknvdsdi
       61 rtvqrsinql lgslkgvkel kvdgklgsrp ensktvaaik afqknlvgia rpdgridvng
      121 rshrklndya krlsdttayt lplvgskdal tdadyhkvae tlgcevaaik avaevesrge
      181 ayfsngkpki lfeahifsil tsraydsshp sissrhwnrs lyvggiseyv rlnkaielns
      241 naaiqsaswg rfqimgfnfk laghvtaesf vkavfesekk qleafvtfiq ksglgehikd
      301 knwaafargy ngseyqknqy diklekaynk yasiknaa
//
LOCUS       WP_257972342             566 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257972342
VERSION     WP_257972342.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 566)
  AUTHORS   Clarke,T.A., Edwards,M.J., Gates,A.J., Hall,A., White,G.F.,
            Bradley,J., Reardon,C.L., Shi,L., Beliaev,A.S., Marshall,M.J.,
            Wang,Z., Watmough,N.J., Fredrickson,J.K., Zachara,J.M., Butt,J.N.
            and Richardson,D.J.
  TITLE     Structure of a bacterial cell surface decaheme electron conduit
  JOURNAL   Proc Natl Acad Sci U S A 108 (23), 9384-9389 (2011)
   PUBMED   21606337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037016.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17963.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..566
                     /product="Ig-like domain-containing protein"
     Region          22..253
                     /region_name="Peptidase_M11"
                     /note="Gametolysin peptidase M11; cl21618"
                     /db_xref="CDD:354892"
     Region          319..>510
                     /region_name="COG1470"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:441079"
     Region          465..538
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
ORIGIN      
        1 agssigqqdt lvmllnfken pndrpitsee ahalvfgevn dfyqensygk twlsgqvvgw
       61 ytlsvsnqvc dypsvqaead kmaradgvvl edyqriiyim tqsgcagggs attgktfpsr
      121 ayidgtlsar viahefghnl glshakaldc gdasvssncs vieygdsydv mgtpdmgyin
      181 tyykermgwl ndaespnilt atqdglyeia eyetqditqn ialkiprgvn pntglkewfy
      241 veyrqamgyd qflddrsyml frgdvtdgvi vrlveegaee syilhmkpns dysqvygrkd
      301 wkdtalpvgd sftdpvsglt inlasaangf agvnvsfggs vtpsvcemsa psvsvkatsd
      361 tqvnagdtve yqltvintan dvcgtirfdv saqvesgwqa ssqsislasg essvttiavt
      421 salsatsgdy pvtfnvvntk deaynvatqa tyavaeqqtg sgdvvavddn vqmskvstvs
      481 invlgndiia dgvsveisam sapskgtvkl lsdgsiqytp akrfknqdsf sytitsgnvt
      541 stamvtvalq sspdsggssp gkgknk
//
LOCUS       WP_257972357              81 aa            linear   BCT 02-MAR-2025
DEFINITION  HipA N-terminal domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257972357
VERSION     WP_257972357.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025041.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13657.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>81
                     /product="HipA N-terminal domain-containing protein"
     Region          1..81
                     /region_name="Couple_hipA"
                     /note="HipA N-terminal domain; cl11853"
                     /db_xref="CDD:448350"
ORIGIN      
        1 mnntkvghlt kvtdgrmqfc yddkwlalpn acpisislpl qnppnlgdpv anyfdnllpd
       61 lastrkniqr rystastntf d
//
LOCUS       WP_257972358             326 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257972358
VERSION     WP_257972358.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>326
                     /product="DUF6531 domain-containing protein"
     Region          149..208
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
ORIGIN      
        1 qfvipltncl gknfhfssqp ipkgehkkfd seqsakafld dfvplsssrv eelyhllgqf
       61 ppnvpdeelk pelyapvfak alvngslyva sfpktkknat isseptpvpk qvkakskqnk
      121 ahtssktqak nsasakplqt gsechekagd pvslvtgeei ltlndvelpn gfvlsrtyrs
      181 skasrnqglg ygwrhafqfe lkeatdekhn vtswefvsds adeiefepve hgstsyqvyv
      241 gaschflnpn trivtlssgd qyrfelvedi wllkqirngi fstfqlrysr hhrlievahn
      301 krpvlecqyd kqgrlvelln akteqv
//
LOCUS       WP_257972376              84 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF294 nucleotidyltransferase-like domain-containing protein,
            partial [Vibrio parahaemolyticus].
ACCESSION   WP_257972376
VERSION     WP_257972376.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015410.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03445.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>84
                     /product="DUF294 nucleotidyltransferase-like
                     domain-containing protein"
                     /GO_function="GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA]"
     Region          1..>84
                     /region_name="DUF294"
                     /note="Putative nucleotidyltransferase DUF294; pfam03445"
                     /db_xref="CDD:460919"
ORIGIN      
        1 mpanvigqvl mmiydaftcr liklaernvg lppcnyawla agshargevh lgsdqdnalv
       61 lddsatesdr iyfrhfamyi ckgl
//
LOCUS       WP_257972382             117 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Vibrio parahaemolyticus].
ACCESSION   WP_257972382
VERSION     WP_257972382.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 117)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 117)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..117
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=13404
     Region          <32..113
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(65,68,91,100)
                     /site_type="active"
                     /db_xref="CDD:271175"
ORIGIN      
        1 mnlnypysfv frltrsadsn tshfvmatra lrtsfrqpis yhyyttlvnr wvtdigldkt
       61 qygthslcrt kasliyaktk nlraiqlllg haklestiey lgfeiedalr isescet
//
LOCUS       WP_257972398             526 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257972398
VERSION     WP_257972398.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>526
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          248..338
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          340..430
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          425..520
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq prpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgiel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnakndvit teedtavtid vlvndsdveg dvlsiqsasv pseqgsvdiv
      301 dgklvftpae nfngeatity ivtdgdltde akvtvtvtpv ndspvavddt vstqedtvvi
      361 idvlpndsdv dgdklsiqsa svpeaqgkve ivdgklvftp aenfngdaei tytvtdgelt
      421 deakvtvtvn pvndvptikv eavesiteda vsidtvvaal tvrdtdtped qltvslenns
      481 ngyfvlvgde vkltqagvda vnndelnlkd ltisasvsdg vnptas
//
LOCUS       WP_257972411             123 aa            linear   BCT 02-MAR-2025
DEFINITION  VirB8/TrbF family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257972411
VERSION     WP_257972411.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 123)
  AUTHORS   Schmidt-Eisenlohr,H., Rittig,M., Preithner,S. and Baron,C.
  TITLE     Biomonitoring of pJP4-carrying Pseudomonas chlororaphis with Trb
            protein-specific antisera
  JOURNAL   Environ Microbiol 3 (11), 720-730 (2001)
   PUBMED   11846762
REFERENCE   2  (residues 1 to 123)
  AUTHORS   Kumar,R.B. and Das,A.
  TITLE     Functional analysis of the Agrobacterium tumefaciens T-DNA
            transport pore protein VirB8
  JOURNAL   J Bacteriol 183 (12), 3636-3641 (2001)
   PUBMED   11371528
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016238.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04335.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>123
                     /product="VirB8/TrbF family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
     Region          4..>123
                     /region_name="TrbF"
                     /note="Type IV secretory pathway, TrbF component
                     [Intracellular trafficking, secretion, and vesicular
                     transport]; COG3701"
                     /db_xref="CDD:442915"
ORIGIN      
        1 msnpespsdy silyqraree wderlgsvvk qahdwkmcaf fsmfvaaiav gstgyigaqs
       61 kiepyvigvk ngeevvgvas vqklptsqle alkvndlerf vedirsvyld vevedkavrr
      121 aya
//
LOCUS       WP_257972435              76 aa            linear   BCT 02-MAR-2025
DEFINITION  EF-Tu/IF-2/RF-3 family GTPase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257972435
VERSION     WP_257972435.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 76)
  AUTHORS   Nissen,P., Kjeldgaard,M., Thirup,S., Polekhina,G., Reshetnikova,L.,
            Clark,B.F. and Nyborg,J.
  TITLE     Crystal structure of the ternary complex of Phe-tRNAPhe, EF-Tu, and
            a GTP analog
  JOURNAL   Science 270 (5241), 1464-1472 (1995)
   PUBMED   7491491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03144.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>76
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          <1..>76
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 peperavdqp flmpiedvfs iqgrgtvvtg riergiltvg devaivgikd tttttctgve
       61 mfrklldegr agenvg
//
LOCUS       WP_257972481             721 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257972481
VERSION     WP_257972481.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 721)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..721
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=78030
     Region          <83..353
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          342..416
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); cl02708"
                     /db_xref="CDD:445894"
     Region          <611..>675
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllvtslfg cnsdsgssts qppmslpeev lpdepeieap ipelpvpefp diskpevpet
       61 pevtppepse pvipeppvpd kvvsrialnq srvslaegel aqvkvigfyn dgtqddltsq
      121 vvwnvenadi vnidergvit alktgvsvir adldefssem tvqvvdaklt niyfdlphka
      181 iakglsfqak aygeytdkqt rdishlvewd stdcsvvmpg tngiftaqde gdadiyaeld
      241 gltsthgsit vtpavlvsmd isstalempl gthkplvvmg tlsdgeqvdl trgitwhvdn
      301 dvveivdnvv kakhkgtalv taasdgvqse piqvqvtdai ltnievttna ssvakgnssl
      361 lsaqgvysde srvelteqva wwvdnqdvlq legarvkgla vgqamvyatk daitsaplqi
      421 qvtnavleki hvypseitle eknvqrfyay geysdettqd vthrvtwrss nkavldliag
      481 glsnsaqlgs vtisaslgel kgisevkvve aeekesaisi cpqprsgegs aeaclmvasd
      541 edgrlftapp svklmnklgy elvkplsyda tkpktyvgik medgtrgpvg dfamfnqygr
      601 dragltsqya nwchdlsvkn fagrdnwrra trnelfslyr asrgsvwdgt esiyeedkdg
      661 ggfgwpanse ywstslmdlp hhegvvydii nlhrgraqlv mdardpayas cvsdapgvpl
      721 k
//
LOCUS       WP_257972587             115 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257972587
VERSION     WP_257972587.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 115)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>115
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>115
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 mskekfertk phvnvgtigh vdhgkttlta aicttlakvy ggeakdfasi dnapeererg
       61 itiatshvey dtpsrhyahv dcpghadyvk nmitgaaqmd ggilvvaatd gpmpq
//
LOCUS       WP_257972588             210 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Vibrio parahaemolyticus].
ACCESSION   WP_257972588
VERSION     WP_257972588.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 210)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..210
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=23307
     Region          5..207
                     /region_name="PRK10403"
                     /note="nitrate/nitrite response regulator protein NarP"
                     /db_xref="CDD:182431"
ORIGIN      
        1 mtvckvmlvd dhplmrrgih qllsfepefe vvaeasngad gvakahelel dlvlldlnmk
       61 gmsgldtlka lradgceari viltvsdspa dieaivrsga dgyllkdtep delvellkqa
      121 hqgdkaysqe vakylsersd hedvfdsltd retqilreva rgfrnkqiad rlfisestvk
      181 vhmksllkkl qvpsrtaatv lylerfgdik
//
LOCUS       WP_257972603             118 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2264 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257972603
VERSION     WP_257972603.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021534.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10022.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>118
                     /product="DUF2264 domain-containing protein"
     Region          <2..118
                     /region_name="DUF2264"
                     /note="Uncharacterized protein conserved in bacteria
                     (DUF2264); cl01752"
                     /db_xref="CDD:470326"
ORIGIN      
        1 mdgdidlyna wgfhyslfwi ckiddsfdld yiklvsskfs ksykylfspt giplwgrsvc
       61 yrlaisapli snaillendd elsyaiscfe sswsffirng avsrgvptqg yigpdlrv
//
LOCUS       WP_257972623             212 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2726 domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257972623
VERSION     WP_257972623.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022337.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10881.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..212
                     /product="DUF2726 domain-containing protein"
                     /calculated_mol_wt=24679
     Region          83..195
                     /region_name="PDDEXK_nuclease-like"
                     /note="PDDEXK family nucleases; cl40440"
                     /db_xref="CDD:477358"
ORIGIN      
        1 maeliillsl vflvflftkk gkkhkrrlne wdqgvaakrs nnvhafdtev idrhpklvev
       61 pipqtkvies nksssvphrk ntylatkter kfykvlqell pdeyvihsqv slmalvqptn
      121 fkdnsrtwak rmdyvitdrd tkvlavield dsshrqkkrq erdiyvnnal nghhpllrfe
      181 arssydkthi atvlerdtii kcrelesvlq ys
//
LOCUS       WP_257972629             373 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257972629
VERSION     WP_257972629.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>373
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          248..338
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          331..>373
                     /region_name="Cadherin_4"
                     /note="Bacterial cadherin-like domain; pfam17803"
                     /db_xref="CDD:465514"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq plpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnaendvit teedtavtid vlvndsdveg dalsiqsasv pkeqgtvevv
      301 dgklvftpae nfngeatisy ivtdgdltde akvsvtvtpv ndspvavddt tsiqedtavt
      361 idvlpndsdv dgd
//
LOCUS       WP_257972638             296 aa            linear   BCT 02-MAR-2025
DEFINITION  SMODS domain-containing nucleotidyltransferase [Enterococcus
            faecium].
ACCESSION   WP_257972638
VERSION     WP_257972638.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 296)
  AUTHORS   Burroughs,A.M., Zhang,D., Schaffer,D.E., Iyer,L.M. and Aravind,L.
  TITLE     Comparative genomic analyses reveal a vast, novel network of
            nucleotide-centric systems in biological conflicts, immunity and
            signaling
  JOURNAL   Nucleic Acids Res 43 (22), 10633-10654 (2015)
   PUBMED   26590262
REFERENCE   2  (residues 1 to 296)
  AUTHORS   Davies,B.W., Bogard,R.W., Young,T.S. and Mekalanos,J.J.
  TITLE     Coordinated regulation of accessory genetic elements produces
            cyclic di-nucleotides for V. cholerae virulence
  JOURNAL   Cell 149 (2), 358-370 (2012)
   PUBMED   22500802
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037736.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18144.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..296
                     /product="SMODS domain-containing nucleotidyltransferase"
                     /calculated_mol_wt=33640
     Region          44..190
                     /region_name="SMODS"
                     /note="Second Messenger Oligonucleotide or Dinucleotide
                     Synthetase domain; cl39525"
                     /db_xref="CDD:477034"
ORIGIN      
        1 maflllhnyt dfieklikkd eiimgllvpr antytipltk rqliakryqr itrainrefw
       61 nsesdtahsl yvgsygrgta istsdidiiv elpmaefdrf knylsngpsk llqviknafq
      121 eilpnsdira dgqvvkinfh dgikfeivpa fnekdywges kgfiypdsnm ggnwkatnpk
      181 keqeamklkn tksnnllyat ckhfrhvrdt eftsyhlsgi vidsfvyeam gnwkfvenns
      241 ggqnissvsy etalleyyns hkvmgglnly spgsnqfvns dssiiclekv lkkial
//
LOCUS       WP_257972639             285 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein, partial [Enterococcus
            faecium].
ACCESSION   WP_257972639
VERSION     WP_257972639.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 285)
  AUTHORS   Ren,J., Sainsbury,S., Nettleship,J.E., Saunders,N.J. and Owens,R.J.
  TITLE     The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals
            a novel protein fold incorporating a helix-turn-helix motif
  JOURNAL   Proteins 78 (7), 1798-1802 (2010)
   PUBMED   20196080
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013540.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01381.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..>285
                     /product="helix-turn-helix domain-containing protein"
     Region          1..59
                     /region_name="HTH_XRE"
                     /note="Helix-turn-helix XRE-family like proteins.
                     Prokaryotic DNA binding proteins belonging to the
                     xenobiotic response element family of transcriptional
                     regulators; cd00093"
                     /db_xref="CDD:238045"
     Site            order(5,9,34)
                     /site_type="other"
                     /note="non-specific DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238045"
     Site            order(8,33)
                     /site_type="active"
                     /note="salt bridge [active]"
                     /db_xref="CDD:238045"
     Site            order(15..16,27,30,34..35)
                     /site_type="other"
                     /note="sequence-specific DNA binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238045"
     Region          73..139
                     /region_name="HipB"
                     /note="Transcriptional regulator, contains XRE-family HTH
                     domain [Transcription]; COG1396"
                     /db_xref="CDD:441006"
     Region          <145..173
                     /region_name="HALZ"
                     /note="Homeobox associated leucine zipper; pfam02183"
                     /db_xref="CDD:460477"
     Region          187..>253
                     /region_name="HipB"
                     /note="Transcriptional regulator, contains XRE-family HTH
                     domain [Transcription]; COG1396"
                     /db_xref="CDD:441006"
ORIGIN      
        1 mnrikfyids skktikqist etginyttlt nyyrgernpr ntetwnilad yfhvpvsylm
       61 gldetnvelk nlnignnikn irksknmtqt dfaelmglsr syigdlennr snpsiktlea
      121 iaraldvpiv alindsstdn ivepyeslta enillkqene elkyeveslr krlyeiqqvv
      181 nqgaekmipn lkdvskriky irkklgmtme qfgshlsnsp kstiatwesg rnipsqkklq
      241 liaivgettt dwikwgtlee yitsyligig yelyikdfpe iphkv
//
LOCUS       WP_257972672            1317 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6701 domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257972672
VERSION     WP_257972672.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042738.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20419.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..1317
                     /product="DUF6701 domain-containing protein"
                     /calculated_mol_wt=143129
     Region          352..609
                     /region_name="lectin_L-type"
                     /note="legume lectins; cl14058"
                     /db_xref="CDD:472686"
     Site            order(423,594)
                     /site_type="other"
                     /note="carbohydrate binding site [chemical binding]"
                     /db_xref="CDD:173886"
     Site            order(474,476,499)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:173886"
     Region          724..1312
                     /region_name="DUF6701"
                     /note="Family of unknown function (DUF6701); pfam20419"
                     /db_xref="CDD:466568"
ORIGIN      
        1 mgsgvdniqc ssgtvstdpd pvepelpdnv chyfpepiqg ikgsfdntlv vpnrsaralg
       61 wsedyktyyt vidkqdlfry tnsmptprqs kfvlagfdtv sqmdaqdrly mepmcasdag
      121 cdvgnkdghl ekrkaneplg vqtnfngttl nitaqnigqi cdnsnlcqsn tysvdggrgi
      181 eieitsnlgk ldinqynspy eqvkvvlpnq tnigtlvmev gpsddvrlvi pedaevtlge
      241 wthtghgkys ffnqskinvs gksvvfnnpi tvtteyyvtl yapdadilfk tnnpsfygfi
      301 lansisfenp itvygsvttr hltmkngvvi qkpdyscpia ppvqqctllp metfssnnid
      361 nwsvigygns vkptvengrf rlngntprqa tasaynyifp snenyleief dhyaygggsn
      421 gadgvalvis danvppqtga fggplgygmk lrknhsgevs qdvegfaggw lgigideygn
      481 fyreggvqla srgkannvgi rgagvkdrng kwlegyqyik ghqfdgdldn renarhrykv
      541 ilnsrksgvi tlsvqrkikn gqwssvisdf dvltagkfny tpdnfrisvt astgaltnth
      601 emddfqvcad kyqkitegih hfefdyagtg sicqasevtl racmndscsk typasvlssn
      661 pgasidpvtv sllpqsssvv kweggdsvtf sdsislklqa yqsgsaklgi asssvpqfgf
      721 egakcriagg alseqncnil fnsaalgvni pdkvagkpff tdgtplygie nrpylefcsa
      781 psqqdgagey rdvifsverv epeknavqve tyvsflkedg kfseevaidn kaskeiddvy
      841 fdskgkayfn lrypeagkva lkakikgekd slgqnsfvsf paylqlavdg glcgasdscd
      901 ksfvaagepf tmkvtayqfg ddkkpaqnyq qsgltvshkv typaadaavs gtlgttaydh
      961 lnltkgtgsf eqtvsevgaf eftitppety lgsksfaitp akevigrfyp kyfrtdevkn
     1021 nqwaypngqs ftymeqafga kefyvealna dkgavtnyaf fsdglharfg lkdtssyetr
     1081 fssnktysgt wlnngtayvt srslgkfags ttdglvfskg sgasypdgpl nlyenakdtt
     1141 isikgisans dpvsidgndg vlttqpdirf grvdlddvgg nqgttlrvpl rveywngsrf
     1201 iansddsqtr vlgetedgsq vhiwptdnta kvvslgaggl vssgyshsvt ateaesyrqq
     1261 trvwldlesg gnslpwlkyn wdnknageen pssvvtfgih rgndrviyrg epgltgq
//
LOCUS       WP_257972753             183 aa            linear   BCT 02-MAR-2025
DEFINITION  recombinase family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257972753
VERSION     WP_257972753.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 183)
  AUTHORS   Yang,W. and Steitz,T.A.
  TITLE     Crystal structure of the site-specific recombinase gamma delta
            resolvase complexed with a 34 bp cleavage site
  JOURNAL   Cell 82 (2), 193-207 (1995)
   PUBMED   7628011
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012464.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00239.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..183
                     /product="recombinase family protein"
                     /GO_function="GO:0000150 - DNA strand exchange activity
                     [Evidence IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
     Region          1..127
                     /region_name="SR_ResInv"
                     /note="Serine Recombinase (SR) family, Resolvase and
                     Invertase subfamily, catalytic domain; members contain a
                     C-terminal DNA binding domain. Serine recombinases
                     catalyze site-specific recombination of DNA molecules by a
                     concerted, four-strand cleavage and...; cd03768"
                     /db_xref="CDD:239737"
     Site            order(5,7,61..62,65)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239737"
     Site            7
                     /site_type="active"
                     /note="catalytic nucleophile [active]"
                     /db_xref="CDD:239737"
     Site            order(60,108..109,111..112,116)
                     /site_type="other"
                     /note="Presynaptic Site I dimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:239737"
     Site            order(66,71..72,104,107..108,111..112,115,118)
                     /site_type="other"
                     /note="Synaptic Antiparallel dimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:239737"
     Site            order(89..91,104..105,108..109,112,116,119,123)
                     /site_type="other"
                     /note="Synaptic Flat tetramer interface [polypeptide
                     binding]"
                     /db_xref="CDD:239737"
     Site            order(89,109,112,116,119,123)
                     /site_type="other"
                     /note="Synaptic Site I dimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:239737"
     Site            order(117,123..124)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:239737"
     Region          <149..181
                     /region_name="HTH_38"
                     /note="Helix-turn-helix domain; pfam13936"
                     /db_xref="CDD:433591"
ORIGIN      
        1 iaylrvstie qnterqlads gisfdksfvd kcsggstnrp alaalkdyar egdtihvhsi
       61 drlarnlvdl kqlvndwtsq gisirfhken lsfkaggcdh mselmlnmlg avaqfelami
      121 qerrqegiek akaagkykgr ptnsenhlri hqlrskglsl rkiasqvgvs lstvqralsk
      181 nvt
//
LOCUS       WP_257972763              93 aa            linear   BCT 02-MAR-2025
DEFINITION  OsmC family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257972763
VERSION     WP_257972763.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 93)
  AUTHORS   Mongkolsuk,S., Praituan,W., Loprasert,S., Fuangthong,M. and
            Chamnongpol,S.
  TITLE     Identification and characterization of a new organic hydroperoxide
            resistance (ohr) gene with a novel pattern of oxidative stress
            regulation from Xanthomonas campestris pv. phaseoli
  JOURNAL   J Bacteriol 180 (10), 2636-2643 (1998)
   PUBMED   9573147
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014608.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02566.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>93
                     /product="OsmC family protein"
     Region          <1..93
                     /region_name="PRK10738"
                     /note="OsmC family protein; cl00767"
                     /db_xref="CDD:469912"
ORIGIN      
        1 msalgscsat dvvlllqdqg fevqglentv tfaltesepr lyksanlhft vngsgfkesd
       61 ilraaqeave khchvclmls ptiditcsae vge
//
LOCUS       WP_257972764              75 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Vibrio parahaemolyticus].
ACCESSION   WP_257972764
VERSION     WP_257972764.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 75)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 75)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>75
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          <2..>73
                     /region_name="VI_Rhs_Vgr"
                     /note="type VI secretion system Vgr family protein;
                     TIGR03361"
                     /db_xref="CDD:274542"
ORIGIN      
        1 vafkfelknt ypqysykvqy eesdlafvqr llaeeglsfc fshsksshvl difddvsfyk
       61 pspefmvdfd tgsse
//
LOCUS       WP_257972774             164 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6678 family protein [Vibrio parahaemolyticus].
ACCESSION   WP_257972774
VERSION     WP_257972774.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042561.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20383.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..164
                     /product="DUF6678 family protein"
                     /calculated_mol_wt=19084
     Region          33..155
                     /region_name="DUF6678"
                     /note="Family of unknown function (DUF6678); pfam20383"
                     /db_xref="CDD:466532"
ORIGIN      
        1 maqwfrfsgc vahtlmrryv ywefmrldlk sniiklidsn glfgvmnntk wnnllaalsd
       61 idellsyrvt yidgstwpes dssyqytsel aqiwgnfrai hfididaris hsrgvllepe
      121 vldhrdkvia ickeqnakis ltecgvrvwg yfqhgkdiem ykyt
//
LOCUS       WP_257972773             789 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257972773
VERSION     WP_257972773.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 789)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 789)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019348.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07728.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>789
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
     Region          416..486
                     /region_name="DpnI_C"
                     /note="Dam-replacing HTH domain; pfam17726"
                     /db_xref="CDD:435994"
     Region          <470..764
                     /region_name="McrB"
                     /note="5-methylcytosine-specific restriction endonuclease
                     McrBC, GTP-binding regulatory subunit McrB [Defense
                     mechanisms]; COG1401"
                     /db_xref="CDD:441011"
ORIGIN      
        1 msqmentvke iidtawfvga tygeddqldn fiekgiwkng ysdkyleqvr smkkgekivi
       61 ksaytrkyel pfdnrghmvs vmaikavgti tnnlndgqtv qvdwlekfde pkqwyfytnr
      121 ttvwridnts wmnkalldft fhgiqqdygk fanapywker fgdtpkndir fkwatfyesf
      181 adklltyksn rqaltafiie lakeyqlsyi igkdlddicp ftvmgifnrg iteqnrkala
      241 salaqflsvd epipesfeai pilnnqkswf fayeenrgkq didnlwsife saltyadsqn
      301 edtqssfsal ynqvssqlgv gwnltmglfw irpwayptld tqsrdyltsl gvtlnktgvk
      361 grcsakdylt linnleirfa eekfpvhsyp elslkawqqp skksiektny sdkrdgwksl
      421 ilerieqlcr snesavftre qfhtvyleel kslfpdnntp dmtidrqmqi lrdesiigfl
      481 qrgqyewygy edivedissi nesteylepy nvtniikdgc flseetvthl lqrlrdkknl
      541 ilqgppgtgk twlakrlaya linekkesnl cavqfhpnls yedfvrgwrp sgegkltlcd
      601 gpfletveva renpnqkyvv vveeinrgnp aqifgemltl leadkrtpte glslsykknn
      661 nervyipenl yvigtmniad rslalvdlal rrrfafftle ttlddtwmnw vstankvpip
      721 flltvkqkld hlntvietdq rlgkqfkigh syvtpsfsse isdpvswfsd vvnteiypll
      781 eeywfdsie
//
LOCUS       WP_257972810             158 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Enterococcus faecium].
ACCESSION   WP_257972810
VERSION     WP_257972810.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 158)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..>158
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          <1..>158
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 kkvqehyaii ptktvmtaaa feqlsplqqa iyeqvlkttv amfaekytye ettiltqvqq
       61 lqlkaiekvp ldlgwkklfg kesdgkekee epllpkvakg emvtvdlqvl eketkppkpy
      121 tegtlitamk tagktvdsee aqsilkeveg igteatra
//
LOCUS       WP_257972063             192 aa            linear   BCT 02-MAR-2025
DEFINITION  conjugative transfer protein MobI(A/C) [Vibrio parahaemolyticus].
ACCESSION   WP_257972063
VERSION     WP_257972063.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 192)
  AUTHORS   Rivard,N., Colwell,R.R. and Burrus,V.
  TITLE     Antibiotic Resistance in Vibrio cholerae: Mechanistic Insights from
            IncC Plasmid-Mediated Dissemination of a Novel Family of Genomic
            Islands Inserted at trmE
  JOURNAL   mSphere 5 (4), e00748-20 (2020)
   PUBMED   32848007
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 192)
  AUTHORS   Hegyi,A., Szabo,M., Olasz,F. and Kiss,J.
  TITLE     Identification of oriT and a recombination hot spot in the IncA/C
            plasmid backbone
  JOURNAL   Sci Rep 7 (1), 10595 (2017)
   PUBMED   28878309
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 192)
  AUTHORS   Carraro,N., Sauve,M., Matteau,D., Lauzon,G., Rodrigue,S. and
            Burrus,V.
  TITLE     Development of pVCR94DeltaX from Vibrio cholerae, a prototype for
            studying multidrug resistant IncA/C conjugative plasmids
  JOURNAL   Front Microbiol 5, 44 (2014)
   PUBMED   24567731
  REMARK    Publication Status: Online-Only
REFERENCE   4  (residues 1 to 192)
  AUTHORS   Garcillan-Barcia,M.P., Francia,M.V. and de la Cruz,F.
  TITLE     The diversity of conjugative relaxases and its application in
            plasmid classification
  JOURNAL   FEMS Microbiol Rev 33 (3), 657-687 (2009)
   PUBMED   19396961
REFERENCE   5  (residues 1 to 192)
  AUTHORS   Ceccarelli,D., Daccord,A., Rene,M. and Burrus,V.
  TITLE     Identification of the origin of transfer (oriT) and a new gene
            required for mobilization of the SXT/R391 family of integrating
            conjugative elements
  JOURNAL   J Bacteriol 190 (15), 5328-5338 (2008)
   PUBMED   18539733
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039622.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19456.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     gene            1..192
                     /gene="mobI"
     Protein         1..192
                     /product="conjugative transfer protein MobI(A/C)"
                     /calculated_mol_wt=23020
     Region          54..168
                     /region_name="MobI"
                     /note="MobI protein; pfam19456"
                     /db_xref="CDD:466093"
ORIGIN      
        1 mtvlnehsaa yqwhqrsqqr qpeseqecfe lalsqslkal adienfamqe pylleflasc
       61 yanqfwrihr vhkdtspgry gcrvrvrnhr feaawyynwy lsanqmsqrn nkeqrvrskh
      121 lakgkdfryp pcrfskanse wesdlieyte dafalirevr heiltikqks qictkrlnkl
      181 rehfqkmekq ng
//
LOCUS       WP_257972859             927 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6701 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257972859
VERSION     WP_257972859.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042738.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20419.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..927
                     /product="DUF6701 domain-containing protein"
     Region          432..921
                     /region_name="DUF6701"
                     /note="Family of unknown function (DUF6701); pfam20419"
                     /db_xref="CDD:466568"
ORIGIN      
        1 givlegnnri gepnkrislr slsvelkvnn eqassiedyq nkhtviygdl lsayptnlhn
       61 vlidgdielt gstlhidgky ntiigkilth sttdifnanv cgtieskghq lhlktnnpfq
      121 qhfvvgdiva hstlliddma vygtteskga saalngsfya kdtaikyfqt lnfnqgvgsq
      181 vcgeiqqtpg sshphsltgk ysqfcgvgqs rcdysssicp statpppecs mlppsnddlg
      241 ltvtpsddma lmcgddlpqf taittnndev vsapvmamls dpdlftlevv kgkptstenq
      301 fqsndsgelv vrvipndidk ialdanyylt ftmvgdsake qtvnfmftpf mfeaysnerr
      361 tlneirviag kpenvhtrll acastgepvv asnyngkpkv vhplikplgg segdfsysae
      421 fkdglsehgl itnesglfev tlsdqfeckg fsecpddgtv evtgkfnvys rpwtlaicen
      481 qntlpsgtse qgdkfiaage yfsltvkpvi wqkggsisdp idssaycdal vttnfmhdga
      541 paasvvlsse qhsplntanq tstllksnya ltqghqsakn hrfvfnglyw eevgslkvka
      601 nlgstyfgmk vnegyrhigr fypkyfkvqs qdwtypknqg fvymnqpfek vtydvvalna
      661 nkedvknyah fapslqqhfy lgelggyqdr fvppapqkae wkrigdasig qfviekastn
      721 atchnspcwe kditkgqypd gpfnrgansk gskiglvtth vvdevnffdg geiltkqpdi
      781 rfgrlnfkdv ggnqgmkikv pldvevwqng rfvtnfddns ttangayyts tpiwsnasvn
      841 naqlsgvakm svgrtndiia sqidaareqi qfslnldhsg nqlpwlkydw etstpeeenp
      901 ptivtfgihr gndriiyrge pnmlgln
//
LOCUS       WP_257972846             573 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein [Vibrio
            parahaemolyticus].
ACCESSION   WP_257972846
VERSION     WP_257972846.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..573
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=64090
     Region          16..573
                     /region_name="PRK10789"
                     /note="SmdA family multidrug ABC transporter
                     permease/ATP-binding protein"
                     /db_xref="CDD:182732"
ORIGIN      
        1 mrwyfrqkwk hyvgsillfa visalqlvpp kavgvivdgv vgntletntl imwllglivl
       61 lftiygcril wriwlfgasw elgtilrnrl yrhlstqpph fferyktgdl margtndvrn
      121 ivmtagegvl taadsvitgi avliimvtqv swkltvmall pmpflaviif fivrilhqrf
      181 rvaqeafssm sdmtqeslng vrmlrafgle nqeqqrfedv vddtgaknia varvdarfdp
      241 aiqltiglsf llsvaagayl vdkgeitlgd ltaftmylgl miwpmlafaf lfnilergsa
      301 awnrlqeifd eqpeiiggtq pldgkplplh ikidafhwsr elppalaavd vtlepgkmlg
      361 iagpvgsgks tlltlllrqh dlengtiqfg dvkikdailp qwrnrfavvn qspflfsksi
      421 fdnialgnpq atkeqvyqaa klacihddie kfpdgyqtev gekgitlsgg qkqriaiara
      481 mllnaqvlvl ddalsavdgr tehqilknle thyrdqaliv iahrltalea adeiivlnhg
      541 hvtergkhhs llehqgwyae mfqyqkleqa mee
//
LOCUS       WP_257972872             166 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257972872
VERSION     WP_257972872.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 166)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>166
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
     Region          1..>145
                     /region_name="GumC"
                     /note="Exopolysaccharide export protein/domain GumC/Wzc1
                     [Cell wall/membrane/envelope biogenesis]; COG3206"
                     /db_xref="CDD:442439"
ORIGIN      
        1 mngthpnnfq mnkvelirfg hhfktlkknw lsiaaftlif sltctwyiys ktsiyqatat
       61 lliqeeqksa lsieevygvd ttkkeyfqtq iailksnhia dkvinelnlt qhpeftssgg
      121 lkqkiddika vplvqdllnv spspketsqy sesyyqalqa fkrkle
//
LOCUS       WP_257972889             204 aa            linear   BCT 02-MAR-2025
DEFINITION  glutamate--tRNA ligase family protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257972889
VERSION     WP_257972889.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 204)
  AUTHORS   Rath,V.L., Silvian,L.F., Beijer,B., Sproat,B.S. and Steitz,T.A.
  TITLE     How glutaminyl-tRNA synthetase selects glutamine
  JOURNAL   Structure 6 (4), 439-449 (1998)
   PUBMED   9562563
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012951.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00749.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>204
                     /product="glutamate--tRNA ligase family protein"
                     /GO_function="GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
     Region          1..>204
                     /region_name="PRK05347"
                     /note="glutaminyl-tRNA synthetase; Provisional"
                     /db_xref="CDD:235424"
ORIGIN      
        1 mseadarpsn firqiidkdl adgkhtsvht rfppepngyl highaksicl nfgiaqdyqg
       61 qcnlrfddtn pekedieyve sikkdvnwlg fewdgevcys snyfdklyey aielinkgla
      121 yvdelspeqi reyrgtlkep gkpspyrdrs veenlalfek mragefeegk aclrakidmg
      181 ssfmvmrdpv lyrvrfathh qtgd
//
LOCUS       WP_257972905             409 aa            linear   BCT 02-MAR-2025
DEFINITION  PAAR-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257972905
VERSION     WP_257972905.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 409)
  AUTHORS   Santos,M.N.M., Cho,S.T., Wu,C.F., Chang,C.J., Kuo,C.H. and Lai,E.M.
  TITLE     Redundancy and Specificity of Type VI Secretion vgrG Loci in
            Antibacterial Activity of Agrobacterium tumefaciens 1D1609 Strain
  JOURNAL   Front Microbiol 10, 3004 (2020)
   PUBMED   31993035
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 409)
  AUTHORS   Pissaridou,P., Allsopp,L.P., Wettstadt,S., Howard,S.A.,
            Mavridou,D.A.I. and Filloux,A.
  TITLE     The Pseudomonas aeruginosa T6SS-VgrG1b spike is topped by a PAAR
            protein eliciting DNA damage to bacterial competitors
  JOURNAL   Proc Natl Acad Sci U S A 115 (49), 12519-12524 (2018)
   PUBMED   30455305
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025047.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13665.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>409
                     /product="PAAR-like domain-containing protein"
     Region          6..101
                     /region_name="Tox-PAAR-like"
                     /note="Toxin PAAR-like domain; pfam13665"
                     /db_xref="CDD:433390"
     Region          <96..176
                     /region_name="COG4253"
                     /note="Uncharacterized conserved protein, DUF2345 family
                     [Function unknown]"
                     /db_xref="CDD:443395"
     Region          226..309
                     /region_name="FIX_Ntox15_NUC_DUF4112_RhsA-like"
                     /note="Found in type sIX effector (FIX) domain of unknown
                     function co-occurring with Ntox15, endonuclease, or RHS
                     repeat domain; cd20746"
                     /db_xref="CDD:410944"
ORIGIN      
        1 mffpkvgkpi vpipygnnak sadlaggttt ismdggnsva vkgrtfskst gdaggdkkgv
       61 asgtieaeak fisasptvkf egkgvcrlsd qmtmnkantm clggaqnpsv svtedqegty
      121 tvdlylsysd depvqgatyt ltdqsgavfe gtldnngkas vggvapgefa ieygedsrdf
      181 mpnvptktnp nfnpsanaql iieetkkgev gfwenawtrm sgaaswiwgv ilgdfnddas
      241 veqiiantal tmipvvdqaa dvrdlsanim tllseeerdk penwlalslt lvgcvptfvs
      301 avkgtckval kggkgtskdt llavlrgigk gdpekflrtl dwvnyakqts qivsdvlkpc
      361 ievatelasy anrmgadelg ayflkladev kiidkmvpdk lkeamgefd
//
LOCUS       WP_257972908             425 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257972908
VERSION     WP_257972908.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>425
                     /product="ABC transporter substrate-binding protein"
     Region          <4..373
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 psngfqprpk hffkgekden ndgmpdnfvr kfnfkaepta apyyldkvkk gksvtfkhvg
       61 edwwgynnry yknrynvekv ritvirdpdi amkhfekgnl dyfemvlpsf whdktntdvy
      121 kkgyiqkywg fnqspqgagg vwmntampll dnlevrkgim aatdfdgmie nimrgdysrk
      181 phglgfghge yddpnntppk fdvdaavkhf ekagfdtlgs dgirvndkgq rlsfaitygy
      241 nswtpriayl keqaklagle ftlnlvdgss afkyilekkh qlaflnmgsg eipayweylh
      301 sdnankpqtn ahtnysspel dklieaydae fdqnkryels hqiqeyvkea niivpgymvp
      361 ysrvahwrwv kipkdgmtka tewvlhpmdi gnfwidesvk ketekamksg rsfpevtvid
      421 drykl
//
LOCUS       WP_257972910             366 aa            linear   BCT 02-MAR-2025
DEFINITION  anaerobic ribonucleoside-triphosphate reductase, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257972910
VERSION     WP_257972910.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 366)
  AUTHORS   Aurelius,O., Johansson,R., Bagenholm,V., Lundin,D., Tholander,F.,
            Balhuizen,A., Beck,T., Sahlin,M., Sjoberg,B.M., Mulliez,E. and
            Logan,D.T.
  TITLE     The Crystal Structure of Thermotoga maritima Class III
            Ribonucleotide Reductase Lacks a Radical Cysteine Pre-Positioned in
            the Active Site
  JOURNAL   PLoS One 10 (7), e0128199 (2015)
   PUBMED   26147435
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024984.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13597.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     gene            1..>366
                     /gene="nrdD"
                     /GO_function="GO:0008998 - ribonucleoside-triphosphate
                     reductase activity [Evidence IEA]"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
     Protein         1..>366
                     /product="anaerobic ribonucleoside-triphosphate reductase"
                     /EC_number="1.1.98.6"
                     /GO_function="GO:0008998 - ribonucleoside-triphosphate
                     reductase (thioredoxin) activity [Evidence IEA]"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
     Region          1..>366
                     /region_name="RNR_PFL"
                     /note="Ribonucleotide reductase and Pyruvate formate
                     lyase; cl38938"
                     /db_xref="CDD:476821"
ORIGIN      
        1 mkpivikrdg srapfnrdri qaaveaaaen kdkdvaiyal nvalavelql kdhdevhihe
       61 iqdlvenelm qgpykalars yieyrhdrdi arekqsaltr eieglieesn ldlinenank
      121 dgkviptqrd llagivakhy akthilprdv vqahevgdih yhdldyapff pmfncmlidl
      181 kgmlthgfkm gnaeidtpks istatavtaq iiaqvashiy ggttinride vlapyvmtsy
      241 ekhleiakew niaepeefak artekecyda fqsleyevnt lhtangqtpf vtfgfglgts
      301 wasrliqqsi lknriaglgk nrktavfpkl vfgikdglnh kaedpnydik klalecaskr
      361 mypdil
//
LOCUS       WP_257972942              47 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3693 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257972942
VERSION     WP_257972942.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023888.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12472.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..47
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..47
                     /product="DUF3693 domain-containing protein"
     Region          <1..46
                     /region_name="DUF3693"
                     /note="Phage related protein; cl22943"
                     /db_xref="CDD:451460"
ORIGIN      
        1 ikavwegtak kfnglglsgi smactglalv isspqepllq calyvlc
//
LOCUS       WP_257972981             332 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257972981
VERSION     WP_257972981.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..332
                     /product="ABC transporter substrate-binding protein"
     Region          <1..280
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 hfekgnldyf emvlpsfwhd ktntdvykkg yiqkywgfnq spqgaggvwm ntamplldnl
       61 evrkgimaat dfdgmienim rgdysrkphg lgfghgeydd pnntppkfdv daavkhfeka
      121 gfdtlgsdgi rvndkgqrls faitygynsw tpriaylkeq aklagleftl nlvdgssafk
      181 yilekkhqla flnmgsgeip ayweylhsdn ankpqtnaht nysspeldkl ieaydaefdq
      241 nkryelshqi qeyvkeanii vpgymvpysr vahwrwvkip kdgmtkatew vlhpmdignf
      301 widesvkket ekamksgkaf pevtviddry kl
//
LOCUS       WP_257972998              88 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6279 family lipoprotein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257972998
VERSION     WP_257972998.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039714.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19795.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>88
                     /product="DUF6279 family lipoprotein"
ORIGIN      
        1 kflysnidwf vieylddyvs lndeqetlle erlllladwh kkeelplyid hlkelenina
       61 nnitlaflqq nrekmkahyd rivsrsap
//
LOCUS       WP_257973008             217 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257973008
VERSION     WP_257973008.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024375.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12973.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..217
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=24578
     Region          5..109
                     /region_name="cupin_ChrR_1"
                     /note="Marinobacter hydrocarbonoclasticus anti-ECFsigma
                     factor ChrR, and similar proteins; 2 heterologous tandem
                     repeats of cupin domain; cd20303"
                     /db_xref="CDD:380437"
     Site            order(5..11,31..32,34,39..40,42,63,65,67,78,81..87,89..90,
                     103,105,107,109)
                     /site_type="other"
                     /note="intramolecular domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:380437"
     Region          113..213
                     /region_name="cupin_ChrR_1"
                     /note="Marinobacter hydrocarbonoclasticus anti-ECFsigma
                     factor ChrR, and similar proteins; 2 heterologous tandem
                     repeats of cupin domain; cd20303"
                     /db_xref="CDD:380437"
     Site            order(113..119,138..139,141,143..144,146,167,169,171,182,
                     185..191,193..194,207,209,211,213)
                     /site_type="other"
                     /note="intramolecular domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:380437"
ORIGIN      
        1 mnmdfsqrvv ietgnqnwva spsqgvwrkp lereakesgh vtsvvkyeag srfsphlhpy
       61 geeifvldgv fsdengdypa gsylrnppgs qhapfsekgc vilvklnqfd pndlktvrin
      121 tretewlpgi gglqvmplhd fkhehvalvk wpkgekfqph rhfggeevfv lsgefrdelg
      181 iypthtwlrs phmsehfpfv eeetviwvkt ghlplgs
//
LOCUS       WP_257973063             390 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Vibrio parahaemolyticus].
ACCESSION   WP_257973063
VERSION     WP_257973063.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..390
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=44609
     Region          23..387
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 melvilaiar frsdqkeams knfvnlaqrl tenghhvvtv sptgfrshik veqhtfrdes
       61 ryeslfeglm nliylcreln rlleqtnsak vnlhiatpie llvvffflns ryqkqttlsi
      121 wqsyltleev rnnknyflqn wfkylhlflf nsfvsaplyk slldkfcqai vhskyqklql
      181 ssqsnlpiyf iqngvfsenf srpilakktq kmsllyighs kpskgvdali elaailkkre
      241 cidfdltlcl sgfgdqenie klvskydlqh qtefkenidi svemaradll ilplrtcvgt
      301 sltpnlivea vscglpiaip yfeqlsdviq fgsnaikidl ddleasarai engfklgqld
      361 qmsrnqikqf karytlesfv sgytrtlglg
//
LOCUS       WP_257973073             395 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257973073
VERSION     WP_257973073.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>395
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          248..338
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          331..391
                     /region_name="Cadherin_4"
                     /note="Bacterial cadherin-like domain; pfam17803"
                     /db_xref="CDD:465514"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq prpgevvvts tdvglldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnaendvit teedtavtid vlvndsdveg dalsiqsasv pseqgsvdiv
      301 dgklvftpae nfngevtity ivtdgdltde akvtvtvtpv ndspvavddt tsiqedtavt
      361 idvmpndtdv dgdtlsiqsa svpsdqgtve ivdgk
//
LOCUS       WP_257973083             561 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: CHASE domain-containing protein [Vibrio harveyi
            group].
ACCESSION   WP_257973083
VERSION     WP_257973083.1
KEYWORDS    RefSeq.
SOURCE      Vibrio harveyi group
  ORGANISM  Vibrio harveyi group
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 561)
  AUTHORS   Mougel,C. and Zhulin,I.B.
  TITLE     CHASE: an extracellular sensing domain common to transmembrane
            receptors from prokaryotes, lower eukaryotes and plants
  JOURNAL   Trends Biochem Sci 26 (10), 582-584 (2001)
   PUBMED   11590001
REFERENCE   2  (residues 1 to 561)
  AUTHORS   Anantharaman,V. and Aravind,L.
  TITLE     The CHASE domain: a predicted ligand-binding module in plant
            cytokinin receptors and other eukaryotic and bacterial receptors
  JOURNAL   Trends Biochem Sci 26 (10), 579-582 (2001)
   PUBMED   11590000
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015859.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03924.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Vibrio harveyi group"
                     /db_xref="taxon:717610"
     Protein         1..561
                     /product="CHASE domain-containing protein"
                     /calculated_mol_wt=64202
     Region          2..>337
                     /region_name="CHASE1"
                     /note="Extracytoplasmic sensor domain CHASE1 (specificity
                     unknown) [Signal transduction mechanisms]; COG3614"
                     /db_xref="CDD:442832"
     Region          <213..554
                     /region_name="COG4251"
                     /note="Bacteriophytochrome (light-regulated signal
                     transduction histidine kinase) [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443393"
ORIGIN      
        1 meqkaktqfd fqahqlvelv qermskyeea llagvsalhm yqapasradw kifadqfdvp
       61 rhfpgingig vihyvpdnki krylewqrkq lseyvphpar taseywpity iepmqnnlka
      121 vgldmahenn rytaaknarl tntatitapi tlvqdsekap gflfyapwfs devpeyygdt
      181 kdgflglvya pfivnklmng tlsgdkrlvn fslydnqell ysdlnvsnvs hhsdphftqt
      241 lelniygrvw tfviqssplf eaqqnttqpl lilifgiivd vllfilflml vrekervdey
      301 akhltkdlql rtdkletvtk dlqarnqalq eanreldqfa yvashdlkap lrgisqlvtw
      361 lieelseflt pqteqyasll snrvhrlerl lddllaysrv grkpgqlttf nleqyceetl
      421 elispqrkis lvchnhigef etlttpleli lrnlisnavk hhhkeigtiy vsgedigdmy
      481 qfvveddgpg ipeqfrervf elfhtlqprd tvegsglgls iikkvldlys chysidsssl
      541 ggcafrfswp knnpvlvkea s
//
LOCUS       WP_257973085             171 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6017 domain-containing protein, partial [Enterococcus faecium].
ACCESSION   WP_257973085
VERSION     WP_257973085.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040303.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19481.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..171
                     /product="DUF6017 domain-containing protein"
     Region          7..149
                     /region_name="DUF6017"
                     /note="Family of unknown function (DUF6017); pfam19481"
                     /db_xref="CDD:437313"
ORIGIN      
        1 sthsipipsp tpapmegeaa atpperkrtg kdeavriyre iilenieyay liqdrsidre
       61 qldeivdlml etvctarkti rvagddypae lvkskymklt gehirfvldc lrenttkvrn
      121 ikqylramlf napstisnyy talvahdmaq pdwgkpksgl pdyscgeges l
//
LOCUS       WP_257973094             141 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Enterococcus faecium].
ACCESSION   WP_257973094
VERSION     WP_257973094.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..>141
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          2..>141
                     /region_name="TOP1Ac"
                     /note="DNA Topoisomerase, subtype IA; DNA-binding,
                     ATP-binding and catalytic domain of bacterial DNA
                     topoisomerases I and III, and eukaryotic DNA topoisomerase
                     III and eubacterial and archael reverse gyrases.
                     Topoisomerases clevage single or double stranded DNA...;
                     cl30544"
                     /db_xref="CDD:357420"
     Site            order(11..17,19..71,74..76,101..109,120..140)
                     /site_type="active"
                     /note="domain III [active]"
                     /db_xref="CDD:238110"
     Site            order(50,52,102)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:238110"
ORIGIN      
        1 qvetekksaa sprlfslssl qskmnqlmka sakdtleamq glyegkylsy prtdtpyite
       61 geyaylldhl deykhflkae aiptpihtpn sryvnnkkvq ehyaiiptkt vmtaaafeql
      121 splqqaiyeq vlkttvamfa e
//
LOCUS       WP_257973098              93 aa            linear   BCT 02-MAR-2025
DEFINITION  GIY-YIG nuclease family protein [Vibrio parahaemolyticus].
ACCESSION   WP_257973098
VERSION     WP_257973098.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 93)
  AUTHORS   Dunin-Horkawicz,S., Feder,M. and Bujnicki,J.M.
  TITLE     Phylogenomic analysis of the GIY-YIG nuclease superfamily
  JOURNAL   BMC Genomics 7, 98 (2006)
   PUBMED   16646971
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 93)
  AUTHORS   Van Roey,P., Meehan,L., Kowalski,J.C., Belfort,M. and Derbyshire,V.
  TITLE     Catalytic domain structure and hypothesis for function of GIY-YIG
            intron endonuclease I-TevI
  JOURNAL   Nat Struct Biol 9 (11), 806-811 (2002)
   PUBMED   12379841
REFERENCE   3  (residues 1 to 93)
  AUTHORS   Kowalski,J.C., Belfort,M., Stapleton,M.A., Holpert,M.,
            Dansereau,J.T., Pietrokovski,S., Baxter,S.M. and Derbyshire,V.
  TITLE     Configuration of the catalytic GIY-YIG domain of intron
            endonuclease I-TevI: coincidence of computational and molecular
            findings
  JOURNAL   Nucleic Acids Res 27 (10), 2115-2125 (1999)
   PUBMED   10219084
REFERENCE   4  (residues 1 to 93)
  AUTHORS   Aravind,L., Walker,D.R. and Koonin,E.V.
  TITLE     Conserved domains in DNA repair proteins and evolution of repair
            systems
  JOURNAL   Nucleic Acids Res 27 (5), 1223-1242 (1999)
   PUBMED   9973609
REFERENCE   5  (residues 1 to 93)
  AUTHORS   Sharma,M., Ellis,R.L. and Hinton,D.M.
  TITLE     Identification of a family of bacteriophage T4 genes encoding
            proteins similar to those present in group I introns of fungi and
            phage
  JOURNAL   Proc Natl Acad Sci U S A 89 (14), 6658-6662 (1992)
   PUBMED   1631169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013691.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01541.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..93
                     /product="GIY-YIG nuclease family protein"
                     /calculated_mol_wt=10694
     Region          19..>66
                     /region_name="GIY-YIG_SF"
                     /note="GIY-YIG nuclease domain superfamily; cl15257"
                     /db_xref="CDD:472790"
     Site            order(19..21,34..36)
                     /site_type="other"
                     /note="GIY-YIG motif/motif A"
                     /db_xref="CDD:198380"
     Site            order(21,34,36,44,48)
                     /site_type="active"
                     /db_xref="CDD:198380"
ORIGIN      
        1 mnwrflgsla earksgcsgv ylivhqgvfe rvvyvgvsnn vgrrisehye sylrgnraiy
       61 naghnddvyk fmsaykihnh vkhyqelanq yki
//
LOCUS       WP_257973137             224 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein, partial [Enterococcus faecium].
ACCESSION   WP_257973137
VERSION     WP_257973137.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Aravind,L., Leipe,D.D. and Koonin,E.V.
  TITLE     Toprim--a conserved catalytic domain in type IA and II
            topoisomerases, DnaG-type primases, OLD family nucleases and RecR
            proteins
  JOURNAL   Nucleic Acids Res 26 (18), 4205-4213 (1998)
   PUBMED   9722641
REFERENCE   2  (residues 1 to 224)
  AUTHORS   Szafranski,P., Smith,C.L. and Cantor,C.R.
  TITLE     Cloning and analysis of the dnaG gene encoding Pseudomonas putida
            DNA primase
  JOURNAL   Biochim Biophys Acta 1352 (3), 243-248 (1997)
   PUBMED   9224947
REFERENCE   3  (residues 1 to 224)
  AUTHORS   Bergerat,A., de Massy,B., Gadelle,D., Varoutas,P.C., Nicolas,A. and
            Forterre,P.
  TITLE     An atypical topoisomerase II from Archaea with implications for
            meiotic recombination
  JOURNAL   Nature 386 (6623), 414-417 (1997)
   PUBMED   9121560
REFERENCE   4  (residues 1 to 224)
  AUTHORS   Versalovic,J. and Lupski,J.R.
  TITLE     The Haemophilus influenzae dnaG sequence and conserved bacterial
            primase motifs
  JOURNAL   Gene 136 (1-2), 281-286 (1993)
   PUBMED   8294018
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013878.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01751.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..>224
                     /product="toprim domain-containing protein"
     Region          2..>224
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 mktvilaekp sqakayadsf skatrkdgyf eiqdrlftge tvitygfghl veldspdmyd
       61 ekwkqwaleh lpifpnqyhy hvpkdkkkqf svvkrqlqsa dtiviatdsd regeliawsi
      121 iqqaganqgk tfkrlwinsl ekeaiyqgfq qlrdaeetyp kfeevqarqi adwligmngs
      181 plyslllqqk gipgsfslgr vqtptlymiy qlqekirnfq kepy
//
LOCUS       WP_257973194             173 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6279 family lipoprotein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257973194
VERSION     WP_257973194.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039714.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19795.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..173
                     /product="DUF6279 family lipoprotein"
     Region          <3..125
                     /region_name="DUF6279"
                     /note="Family of unknown function (DUF6279); pfam19795"
                     /db_xref="CDD:437627"
ORIGIN      
        1 sapdlfslsl qltpkqqqef lqnvrkdyqe rnakyadkte aeireiilen tkewmeewig
       61 elnsdqkrya kqisqqtiln splwrnyras iyqeleylfe nqsnsvvyqq vfmqllfepe
      121 syyseqlsen idhnlglvdq ltlnvaksmt dkqwihfhnk vkewrvlaee lqd
//
LOCUS       WP_257973256             156 aa            linear   BCT 02-MAR-2025
DEFINITION  EF-Tu/IF-2/RF-3 family GTPase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257973256
VERSION     WP_257973256.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Nissen,P., Kjeldgaard,M., Thirup,S., Polekhina,G., Reshetnikova,L.,
            Clark,B.F. and Nyborg,J.
  TITLE     Crystal structure of the ternary complex of Phe-tRNAPhe, EF-Tu, and
            a GTP analog
  JOURNAL   Science 270 (5241), 1464-1472 (1995)
   PUBMED   7491491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03144.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>156
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          <1..156
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 weakivelae aldtyipepe ravdqpflmp iedvfsiqgr gtvvtgrier giltvgdeva
       61 ivgikdtttt tctgvemfrk lldegragen vgallrgtkr devergqvla kpgsitphtk
      121 fesevyvlsk eeggrhtpff kgyrpqfyfr ttdvtg
//
LOCUS       WP_257973259              91 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257973259
VERSION     WP_257973259.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 91)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>91
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          <1..>91
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 tdgpmpqtre hillgrqvgi pyiivfmnkc dmvddeelle lvemevrell seydfpgddl
       61 pviqgsalga lngeeqweak ivelaealdt y
//
LOCUS       WP_257973258             124 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257973258
VERSION     WP_257973258.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 124)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>124
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          26..>121
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 nniihdidel tedmsfdpst sdikiniamn syiaywlape iiqyfsenap nieltiedwn
       61 eltpdrinnq lvhfgihyfp lnlnknlvqr kvgkdmsvmv crkdhpinne sisletiasy
      121 plai
//
LOCUS       WP_257973286             417 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257973286
VERSION     WP_257973286.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>417
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          248..338
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          330..417
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq plpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetmg
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnaendvit teedtavtid vlvndsdveg dalsiqsasv pseqgsvdiv
      301 dgklvftpae nfngeatity ivtdgdltde akvtvtvtpv ndspvavddt tsiqedtavt
      361 idvltndtdv dgdklsiesa svpkeqgtve vvdgklvftp aenfngdaei tytvtdg
//
LOCUS       WP_257973302             112 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257973302
VERSION     WP_257973302.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 112)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>112
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>112
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 skekfertkp hvnvgtighv dhgkttltaa icttlakvyg geakdfasid napeerergi
       61 tiatshveyd tpsrhyahvd cpghadyvkn mitgaaqmdg gilvvaatdg pm
//
LOCUS       WP_257973412             269 aa            linear   BCT 02-MAR-2025
DEFINITION  PHP domain-containing protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257973412
VERSION     WP_257973412.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 269)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014826.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02811.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>269
                     /product="PHP domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          2..>269
                     /region_name="dnaE"
                     /note="DNA polymerase III subunit alpha; Validated;
                     PRK05673"
                     /db_xref="CDD:235554"
ORIGIN      
        1 migadfkmqs defgeeltql tvlaadnagy knltlliska ylrghvqhqp vidrawlaem
       61 seglivlsga kngdigkall kgnrklvesc vefykqhfpd rfylelirtg rpdeetylhf
      121 aidlaeqhdl pvvatnevvf lsadlfdahe irvaihdgyt ledprrpkny spqqylrtee
      181 emcelfadip ealensveia krcnvtvrlg eyflpafpte gmeeteflvm ksregleerl
      241 eflfpdeeer kkrrpeyder lqieldvin
//
LOCUS       WP_257973414             101 aa            linear   BCT 02-MAR-2025
DEFINITION  putative signal transducing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257973414
VERSION     WP_257973414.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020967.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09413.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..101
                     /product="putative signal transducing protein"
ORIGIN      
        1 aknpaeahiv cellktedic cevrgeglfg lkgelpfgdd tdpyvwlldp eqqlkahsii
       61 eafrqqsqsn iyedwqcphc lehnegqfgv cwqcgyqige p
//
LOCUS       WP_257973417              52 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3693 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257973417
VERSION     WP_257973417.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023888.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12472.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..52
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>52
                     /product="DUF3693 domain-containing protein"
     Region          <1..46
                     /region_name="DUF3693"
                     /note="Phage related protein; cl22943"
                     /db_xref="CDD:451460"
ORIGIN      
        1 makkfdrlgl ssisitcael tlviaspkes lyqcalcdvm lnnvsyqlhi hp
//
LOCUS       WP_257973449              96 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257973449
VERSION     WP_257973449.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>96
                     /product="ABC transporter substrate-binding protein"
     Region          6..>96
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 akaikggnvn vavvddspfk gvfneelytd nydyqymqpa aeslfaynst fkfnnngaas
       61 lkqnnsaktl tvtikpnvkw sdgqpvvard lvyaye
//
LOCUS       WP_257973456              86 aa            linear   BCT 02-MAR-2025
DEFINITION  PEP-utilizing enzyme, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257973456
VERSION     WP_257973456.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 86)
  AUTHORS   Herzberg,O., Chen,C.C., Kapadia,G., McGuire,M., Carroll,L.J.,
            Noh,S.J. and Dunaway-Mariano,D.
  TITLE     Swiveling-domain mechanism for enzymatic phosphotransfer between
            remote reaction sites
  JOURNAL   Proc Natl Acad Sci U S A 93 (7), 2652-2657 (1996)
   PUBMED   8610096
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012609.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00391.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>86
                     /product="PEP-utilizing enzyme"
                     /GO_function="GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA]"
                     /GO_process="GO:0016310 - phosphorylation [Evidence IEA]"
     Region          <1..>86
                     /region_name="PRK11061"
                     /note="phosphoenolpyruvate--protein phosphotransferase"
                     /db_xref="CDD:182937"
ORIGIN      
        1 lavvslegga nshaailsra lgvpavmgan intdvvngkl givdgytgei flepnrqllr
       61 eyrslvsees elfamvnkdl alpavt
//
LOCUS       WP_257973487             120 aa            linear   BCT 02-MAR-2025
DEFINITION  tripartite tricarboxylate transporter substrate-binding protein,
            partial [Vibrio parahaemolyticus].
ACCESSION   WP_257973487
VERSION     WP_257973487.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 120)
  AUTHORS   Winnen,B., Hvorup,R.N. and Saier,M.H. Jr.
  TITLE     The tripartite tricarboxylate transporter (TTT) family
  JOURNAL   Res Microbiol 154 (7), 457-465 (2003)
   PUBMED   14499931
REFERENCE   2  (residues 1 to 120)
  AUTHORS   Antoine,R., Jacob-Dubuisson,F., Drobecq,H., Willery,E., Lesjean,S.
            and Locht,C.
  TITLE     Overrepresentation of a gene family encoding extracytoplasmic
            solute receptors in Bordetella
  JOURNAL   J Bacteriol 185 (4), 1470-1474 (2003)
   PUBMED   12562821
REFERENCE   3  (residues 1 to 120)
  AUTHORS   Sweet,G.D., Kay,C.M. and Kay,W.W.
  TITLE     Tricarboxylate-binding proteins of Salmonella typhimurium.
            Purification, crystallization, and physical properties
  JOURNAL   J Biol Chem 259 (3), 1586-1592 (1984)
   PUBMED   6141166
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015366.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03401.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..120
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
     Region          <2..115
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 lstglgevle msksgqvkvl aitapkrlea apniptltey gnetvfanwr gffaapgvsq
       61 kkvdewnaaf tkmyntdewq vvrdrngwid nykadkaffa fledqekqmg dlmrelgflk
//
LOCUS       WP_257973519             105 aa            linear   BCT 02-MAR-2025
DEFINITION  MCP four helix bundle domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257973519
VERSION     WP_257973519.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 105)
  AUTHORS   Ulrich,L.E. and Zhulin,I.B.
  TITLE     Four-helix bundle: a ubiquitous sensory module in prokaryotic
            signal transduction
  JOURNAL   Bioinformatics 21 Suppl 3 (Suppl 3), iii45-iii48 (2005)
   PUBMED   16306392
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024140.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12729.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>105
                     /product="MCP four helix bundle domain-containing protein"
     Region          <32..>98
                     /region_name="chemoreceptor_sensor"
                     /note="4-helix bundle ligand binding sensor domain of
                     chemoreceptors such as Tar or Tsr; cl00144"
                     /db_xref="CDD:444710"
ORIGIN      
        1 mknteielgi lrkdefsllt nvnhpqfmew vaglekseqk idkyldqyek glwdqrdrda
       61 fnkvksawvk ysafnneyak lllnnkidea netllngfst ftqls
//
LOCUS       WP_257973525             773 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257973525
VERSION     WP_257973525.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 773)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..773
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..773
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=88104
     Region          211..>349
                     /region_name="NarQ"
                     /note="Signal transduction histidine kinase NarQ,
                     nitrate/nitrite-specific [Signal transduction mechanisms];
                     COG3850"
                     /db_xref="CDD:443059"
     Region          <323..749
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 milsalvssy iiysiqkvtl ikredsyiql qmeklagqfr qaniflnsya ytlsksdvlq
       61 dyfinhdnpy rervlfsrld etadvlshgy kgdasmaild gkqnllyyte nqyyessgvv
      121 dpkvleyiat sfaargeysh tgfiynssgq sillryelid krtgappvsf dpsnvffvvv
      181 svslevfndi khdvefdths vitfadkpiy ldiplaqtie llphfyavls paeylmwnkv
      241 dkvwlelals fgiaafctit livlvlyryv lhpvsrldkq lselesnqrd nieklgtnde
      301 igrlssrffd myeelnviyk ktkrlaetdh ltqlanrhrf hqlatrelas ppshlwviyv
      361 dldnfkyvnd kyghelgdnl lkvfsthikn acqkfsqqyd spcfgarlsg defaillssn
      421 hdvgsipdll akellkpisn lsqtwanafp vtasvgiaey pqdgqdiakl lsnadaamyq
      481 akragknqya yysaelnles qrrsqieral rksnvenefr lvfqpymnnk dneieglevl
      541 lrwdaeglgp vpptefipia eqaglfdkid rwvfanatee yhhlrsifgk divlsinlss
      601 aelnslemaq fihkhvtrng ikpecielei tetfaaeqqg talldelskl gyrlaiddfg
      661 sgytsltqlv qypvqkikfd reflltlmnt nnghvikpii elchaqnktv taegiehdvm
      721 hkwlsayrcd fmqgylfgkp mdkeqlslww ksanddnrfs qplttklaae ggi
//
LOCUS       WP_257973528             304 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257973528
VERSION     WP_257973528.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>304
                     /product="DUF6531 domain-containing protein"
     Region          152..215
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
ORIGIN      
        1 mipqfviplt nclgqsyhfs sqpipkgehk kfdseqsaka flddfvplss srveelyhll
       61 dqfppnvpde eltpelyapv fakalvngsl yvasfpktkk natisseptp vpkqvkaksk
      121 qnkahtsskt qaknsasakp lqtgsechek agdpvslvtg eeiltlndve lpngfvwsrt
      181 yrsskasrnq glgygwrhaf qfelkevtde khnvtswefv sdsadeiefe pvehgstsyq
      241 vyvgaschfl npntrivtls sgdqyrfelv ediwllkqir ngifstfqlr ysrnhrliev
      301 ahsk
//
LOCUS       WP_257973529             246 aa            linear   BCT 02-MAR-2025
DEFINITION  FliM/FliN family flagellar motor switch protein [Vibrio
            parahaemolyticus].
ACCESSION   WP_257973529
VERSION     WP_257973529.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 246)
  AUTHORS   Paul,K. and Blair,D.F.
  TITLE     Organization of FliN subunits in the flagellar motor of Escherichia
            coli
  JOURNAL   J Bacteriol 188 (7), 2502-2511 (2006)
   PUBMED   16547037
REFERENCE   2  (residues 1 to 246)
  AUTHORS   Brown,P.N., Mathews,M.A., Joss,L.A., Hill,C.P. and Blair,D.F.
  TITLE     Crystal structure of the flagellar rotor protein FliN from
            Thermotoga maritima
  JOURNAL   J Bacteriol 187 (8), 2890-2902 (2005)
   PUBMED   15805535
REFERENCE   3  (residues 1 to 246)
  AUTHORS   Chen,L.M., Kaniga,K. and Galan,J.E.
  TITLE     Salmonella spp. are cytotoxic for cultured macrophages
  JOURNAL   Mol Microbiol 21 (5), 1101-1115 (1996)
   PUBMED   8885278
REFERENCE   4  (residues 1 to 246)
  AUTHORS   Bischoff,D.S. and Ordal,G.W.
  TITLE     Identification and characterization of FliY, a novel component of
            the Bacillus subtilis flagellar switch complex
  JOURNAL   Mol Microbiol 6 (18), 2715-2723 (1992)
   PUBMED   1447979
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013236.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01052.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..246
                     /product="FliM/FliN family flagellar motor switch protein"
                     /calculated_mol_wt=27597
     Region          13..234
                     /region_name="FliM"
                     /note="Flagellar motor switch protein FliM [Cell
                     motility]; COG1868"
                     /db_xref="CDD:441473"
ORIGIN      
        1 mrdklenlis escssltnel qnwlstnkve asltsvdlhr fspalmdkdq tsthkhqegg
       61 mvfvhgdtqt lvkladrfyg antersvatl tasdlrlqer isriiigwla pqdmweacey
      121 eaprgiglcv qlnitfegyq gsmylkldth liqtlieqle lqsdvdlyep fcrslestpv
      181 rlnvvlskkt malsdvvslk pddimpiell ntvpvsignq plftgriaeq dgqlvlifnp
      241 dketqr
//
LOCUS       WP_257973536             198 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257973536
VERSION     WP_257973536.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>198
                     /product="DUF6531 domain-containing protein"
     Region          150..>198
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
ORIGIN      
        1 pqfvipltnc lgqsfhfssq pipkgehkkf dseqsakafl ddfvplsssr veelyhllgq
       61 fppnvpdeel tpelyapvfa kalvngslyv asfpktkkna tisseptpvp kqvkakskqn
      121 kahtssktqa kssasvkplq tdsechekag dpvslvtgee iltlndvelp ngfvwsrtyr
      181 sskasrnqgl gygwrhaf
//
LOCUS       WP_257973549             547 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257973549
VERSION     WP_257973549.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>547
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          <202..540
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq plpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnaendvit tgedtavtid vlvndsdveg dvlsiqsasv pseqgsvdiv
      301 dgklvftpae nfngeatity ivtdgdltde akvtvtvtpv ndspvavddt vstqedtvvt
      361 idvlpndsdv dgdklsiqsa svpeaqgkve ivegklvftp aenfngdaei tytvtdgqlt
      421 deakvsvtvn pvndaptikv davesiteda vstdtvvatl tvrdtdtped rltvslenns
      481 ngyfvlvgde vkltqagvda vnndeldlkd ltisasvsdg vnptasdsds lvvnrvndap
      541 tvenaia
//
LOCUS       WP_257973539             101 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar phosphate nucleotidyltransferase, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257973539
VERSION     WP_257973539.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 101)
  AUTHORS   Jensen,S.O. and Reeves,P.R.
  TITLE     Domain organisation in phosphomannose isomerases (types I and II)
  JOURNAL   Biochim Biophys Acta 1382 (1), 5-7 (1998)
   PUBMED   9507048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012695.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00483.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..101
                     /product="sugar phosphate nucleotidyltransferase"
                     /GO_function="GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <1..93
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
ORIGIN      
        1 cvreydyqip ygvikgegnr itsmvekpiq rffvnagiyv vspvviqsvp enhhidmptl
       61 leqhmnkrnn vlmfpiheyw ldigrmddfn raqtdiytlg l
//
LOCUS       WP_257973561             165 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA cytosine methyltransferase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257973561
VERSION     WP_257973561.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012372.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00145.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>165
                     /product="DNA cytosine methyltransferase"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
     Region          58..>164
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
ORIGIN      
        1 mmaqklarai sdhfegkiek dnvgelsevk dsncpeskek nilipygykp nnsnpsdsfi
       61 dlfcgaggit igftkagwnp alcvdfnknv althernyag lpfkqgdlsd pellndicsr
      121 ftpgelgmvv ggppcqgfsi fgkrrfvntk gydphvdprn klvys
//
LOCUS       WP_257973580             276 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257973580
VERSION     WP_257973580.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 276)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 276)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 276)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 276)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..276
                     /product="ATP-binding protein"
     Region          <20..273
                     /region_name="COG4192"
                     /note="Signal transduction histidine kinase regulating
                     phosphoglycerate transport system [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443346"
ORIGIN      
        1 mttrtlesrv lektqdlllk nqqleneiee rirtednlkk tqdeliqaak mavvgqtmts
       61 lahelnqpln amstylysar mfleqespek vgvsithieg latrmskiin slrqfarkpe
      121 gerevksvsv hevaeqasti vntrakrqqi iienqlpddv kvqgdmlsle qvfinvlvns
      181 cdalmestrd eqkriqmalv ertsqttlia isdngigfge eivqrifqpf vstkevglgl
      241 gmnickslie khkgsiylas slekgamvvl elpneq
//
LOCUS       WP_257973617              71 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257973617
VERSION     WP_257973617.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 71)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>71
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>71
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 dfasidnape erergitiat shveydtpsr hyahvdcpgh adyvknmitg aaqmdggilv
       61 vaatdgpmpq t
//
LOCUS       WP_257973640             169 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6795 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257973640
VERSION     WP_257973640.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042847.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20598.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..169
                     /product="DUF6795 domain-containing protein"
     Region          17..123
                     /region_name="DUF6795"
                     /note="Domain of unknown function (DUF6795); cl03084"
                     /db_xref="CDD:470730"
ORIGIN      
        1 amfwpfkkyd vemspevrgv ikldgkpqvg ltvhrelfye gykkgktlkd eaqtnelgef
       61 ffpgvtvrsr apgdifggsl kvyqyvcvdc esekkevwga wvptegadsl rwmlmnidce
      121 lsnnkqihev dispestrrt pvhsvcdwns erintyeyde atdthvlkk
//
LOCUS       WP_257973650              69 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257973650
VERSION     WP_257973650.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 69)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>69
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          <1..>69
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 gpmpqtrehi llgrqvgvpy iivflnkcdm vddeellelv emevrellsq ydfpgddtpv
       61 vrgsalkal
//
LOCUS       WP_257973668             213 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257973668
VERSION     WP_257973668.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 213)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>213
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
     Region          1..>213
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 manqtiqssa laddeidlgk lfgilidakw fiisitlffa tlgiavalls tpiykadali
       61 qiekkssggi samvgdmgel fsaessatte ieiiksrmil gdtvdkfnlt tiatpdylpf
      121 vgkglaring tqnyislttf evprtargls hqliatdiek gqfslmledq mvlsgsvgql
      181 iemngyrvkv nqlnaqnedt ftiskiskld ain
//
LOCUS       WP_257973677             271 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Enterococcus faecium].
ACCESSION   WP_257973677
VERSION     WP_257973677.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 271)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..>271
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          <2..>269
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 iadwligmng splyslllqq kgipgsfslg rvqtptlymi yqlqekirnf qkepyfegka
       61 qviaqngafd akldpnetqa tqeafedylk ekgvqlgkqp gtihqvetek ksaasprlfs
      121 lsslqskmnq lmkasakdtl eaiqglyegk ylsyprtdtp yitegeyayl ldhldeykhf
      181 lkaeaiptpi htpnsryvnn kkvqehyaii ptktvmtaaa feqlsplqqa iyeqvlkttv
      241 amfaekytye ettiltqvqq lqlkaigkvp l
//
LOCUS       WP_257973681             208 aa            linear   BCT 02-MAR-2025
DEFINITION  Rib/alpha-like domain-containing protein, partial [Enterococcus
            faecium].
ACCESSION   WP_257973681
VERSION     WP_257973681.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 208)
  AUTHORS   Wastfelt,M., Stalhammar-Carlemalm,M., Delisse,A.M., Cabezon,T. and
            Lindahl,G.
  TITLE     Identification of a family of streptococcal surface proteins with
            extremely repetitive structure
  JOURNAL   J Biol Chem 271 (31), 18892-18897 (1996)
   PUBMED   8702550
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020018.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08428.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..>208
                     /product="Rib/alpha-like domain-containing protein"
     Region          76..151
                     /region_name="Rib"
                     /note="Rib domain; pfam08428"
                     /db_xref="CDD:462474"
     Region          155..>207
                     /region_name="Rib"
                     /note="Rib domain; pfam08428"
                     /db_xref="CDD:462474"
ORIGIN      
        1 gyhkvtftag egtsiesgtt vfavkdgvsl pedklpvlka kdgytdakwp eeatqpitad
       61 dtefvssatk lddksdadky npegqkvtte lnkepdaseg iknkedlpkd tkytwkekvd
      121 vsaagnkkgt vvvtypdgss devevdvtvt dnrsdadkye ptvegekvev ggtvdltdnv
      181 tnlptlpegt tvtdvtpggt idtntpgn
//
LOCUS       WP_257973689              67 aa            linear   BCT 02-MAR-2025
DEFINITION  pilin N-terminal domain-containing protein, partial [Enterococcus
            faecium].
ACCESSION   WP_257973689
VERSION     WP_257973689.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 67)
  AUTHORS   Paterson,N.G. and Baker,E.N.
  TITLE     Structure of the full-length major pilin from Streptococcus
            pneumoniae: implications for isopeptide bond formation in
            gram-positive bacterial pili
  JOURNAL   PLoS One 6 (7), e22095 (2011)
   PUBMED   21760959
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16555.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..>67
                     /product="pilin N-terminal domain-containing protein"
     Region          <1..42
                     /region_name="GramPos_pilinD1"
                     /note="Gram-positive pilin subunit D1, N-terminal domain;
                     pfam16555"
                     /db_xref="CDD:465172"
ORIGIN      
        1 vyesksaagl vtqkakpmvv iapmtdntgs gflkdihlyp knivsklsfe ltkfgddgta
       61 qskqtpl
//
LOCUS       WP_257973721              78 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257973721
VERSION     WP_257973721.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 78)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>78
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
     Region          1..>71
                     /region_name="GumC"
                     /note="Exopolysaccharide export protein/domain GumC/Wzc1
                     [Cell wall/membrane/envelope biogenesis]; COG3206"
                     /db_xref="CDD:442439"
ORIGIN      
        1 mngthpnnfq mnkvelirfg hhfktlkknw fsiaaftlif sltctwyiys ktsiyqatat
       61 lliqeeqksa lsieevyg
//
LOCUS       WP_257973745             392 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257973745
VERSION     WP_257973745.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>392
                     /product="ABC transporter substrate-binding protein"
     Region          <1..392
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 ddytirvnla vaqshdslmv minmpsngfq prpkhffkge kdenndgmpd nfvrkfnfka
       61 eptaapyyld kvkkgksvtf khvgedwwgy nnryyknryn vekvritvir dpdiamkhfe
      121 kgnldyfemv lpsfwhdktn tdvykkgyiq kywgfnqspq gaggvwmnta iplldnlevr
      181 kgimaatdfd gmienimrgd ysrkphglgf ghgeyddpnn tppkfdvdaa vkhfekagfd
      241 tlgsdgirvn dkgqrlsfai tygynswtpr iaylkeqakl agleftlnlv dgssafkyil
      301 ekkhqlafln mgsgeipayw eylhsdnank pqtnahtnys speldkliea ydaefdqnkr
      361 yelshqiqey vkeaniivpg ymvpysrvah wr
//
LOCUS       WP_257973758             114 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF294 nucleotidyltransferase-like domain-containing protein,
            partial [Vibrio parahaemolyticus].
ACCESSION   WP_257973758
VERSION     WP_257973758.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015410.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03445.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>114
                     /product="DUF294 nucleotidyltransferase-like
                     domain-containing protein"
                     /GO_function="GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA]"
     Region          <1..73
                     /region_name="DUF294"
                     /note="Putative nucleotidyltransferase DUF294; pfam03445"
                     /db_xref="CDD:460919"
ORIGIN      
        1 hlgsdqdnal vlddsatesd riyfrhfamy ickglaecgy plckgrfmaa tpkwnqplfi
       61 wkqlyrkwan npeynmllnl nvflevrfis gdrslfdeln sererctknn phli
//
LOCUS       WP_257973810              69 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257973810
VERSION     WP_257973810.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 69)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>69
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..>69
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
ORIGIN      
        1 meqitstvqn ttehtheasm ladqaaiivq nngdmmsqvt nkmraintss lqmteiinli
       61 dsiafqtni
//
LOCUS       WP_257973813             137 aa            linear   BCT 02-MAR-2025
DEFINITION  lyase family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257973813
VERSION     WP_257973813.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00206.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>137
                     /product="lyase family protein"
     Region          <1..>137
                     /region_name="FumC"
                     /note="Fumarate hydratase class II [Energy production and
                     conversion]; COG0114"
                     /db_xref="CDD:439884"
ORIGIN      
        1 iqllggtlgt qspigpnddv nmgqssndsf ptamhiaaif aideqlipsi esliqviekk
       61 adswmavvki grthledavp ltvgqewhgw agqlkdaled ikrskldlyk laiggtavgt
      121 glnapkgfsk dvaekia
//
LOCUS       WP_257973822              76 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257973822
VERSION     WP_257973822.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 76)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..76
                     /product="PfkB family carbohydrate kinase"
     Region          <3..61
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
ORIGIN      
        1 elyipaikvn aidtsgagda figcfshyyv htgnieealk kavmfsafsv tgkgtqssyp
       61 sveqftefvq intvnk
//
LOCUS       WP_257973825              81 aa            linear   BCT 02-MAR-2025
DEFINITION  fimbria/pilus outer membrane usher protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257973825
VERSION     WP_257973825.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 81)
  AUTHORS   Huang,Y., Smith,B.S., Chen,L.X., Baxter,R.H. and Deisenhofer,J.
  TITLE     Insights into pilus assembly and secretion from the structure and
            functional characterization of usher PapC
  JOURNAL   Proc Natl Acad Sci U S A 106 (18), 7403-7407 (2009)
   PUBMED   19380723
REFERENCE   2  (residues 1 to 81)
  AUTHORS   Remaut,H., Tang,C., Henderson,N.S., Pinkner,J.S., Wang,T.,
            Hultgren,S.J., Thanassi,D.G., Waksman,G. and Li,H.
  TITLE     Fiber formation across the bacterial outer membrane by the
            chaperone/usher pathway
  JOURNAL   Cell 133 (4), 640-652 (2008)
   PUBMED   18485872
REFERENCE   3  (residues 1 to 81)
  AUTHORS   Jacob-Dubuisson,F., Striker,R. and Hultgren,S.J.
  TITLE     Chaperone-assisted self-assembly of pili independent of cellular
            energy
  JOURNAL   J Biol Chem 269 (17), 12447-12455 (1994)
   PUBMED   7909802
REFERENCE   4  (residues 1 to 81)
  AUTHORS   Schifferli,D.M. and Alrutz,M.A.
  TITLE     Permissive linker insertion sites in the outer membrane protein of
            987P fimbriae of Escherichia coli
  JOURNAL   J Bacteriol 176 (4), 1099-1110 (1994)
   PUBMED   7906265
REFERENCE   5  (residues 1 to 81)
  AUTHORS   Van Rosmalen,M. and Saier,M.H. Jr.
  TITLE     Structural and evolutionary relationships between two families of
            bacterial extracytoplasmic chaperone proteins which function
            cooperatively in fimbrial assembly
  JOURNAL   Res Microbiol 144 (7), 507-527 (1993)
   PUBMED   7906046
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012786.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00577.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>81
                     /product="fimbria/pilus outer membrane usher protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015473 - fimbrial usher porin activity
                     [Evidence IEA]"
                     /GO_process="GO:0009297 - pilus assembly [Evidence IEA]"
     Region          <4..>81
                     /region_name="Usher"
                     /note="Outer membrane usher protein; pfam00577"
                     /db_xref="CDD:425762"
ORIGIN      
        1 mtaaslpflt rqgqflykft vgqsdpfgrs qkvdprfiag eisyglfgnt slfggliati
       61 dntnyqavnl gigqnmnmfg a
//
LOCUS       WP_257973839              76 aa            linear   BCT 02-MAR-2025
DEFINITION  Mur ligase family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257973839
VERSION     WP_257973839.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 76)
  AUTHORS   Bertrand,J.A., Auger,G., Fanchon,E., Martin,L., Blanot,D., van
            Heijenoort,J. and Dideberg,O.
  TITLE     Crystal structure of UDP-N-acetylmuramoyl-L-alanine:D-glutamate
            ligase from Escherichia coli
  JOURNAL   EMBO J 16 (12), 3416-3425 (1997)
   PUBMED   9218784
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08245.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>76
                     /product="Mur ligase family protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <13..>76
                     /region_name="murE"
                     /note="UDP-N-acetylmuramoylalanyl-D-glutamate--2,
                     6-diaminopimelate ligase; Provisional; PRK00139"
                     /db_xref="CDD:234660"
ORIGIN      
        1 tkmklvgvtg tngkttttql iaqwakglge tsavmgtvgn gllgqvtpse nttgsavdiq
       61 leltqllnkk asltam
//
LOCUS       WP_257973850              70 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257973850
VERSION     WP_257973850.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>70
                     /product="helicase-related protein"
     Region          <1..>70
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 sqgartrala dfksgdirvl vatdiaargl dieqlpyvvn felpnvaedy vhrigrtgra
       61 eatgmavslv
//
LOCUS       WP_257973855              65 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257973855
VERSION     WP_257973855.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00528.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>65
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <2..>65
                     /region_name="DppC"
                     /note="ABC-type dipeptide/oligopeptide/nickel transport
                     system, permease component [Amino acid transport and
                     metabolism, Inorganic ion transport and metabolism];
                     COG1173"
                     /db_xref="CDD:440786"
ORIGIN      
        1 msrllwgtrv slmvgisatl iaailgtlig liagyvghrt dtllmrcidm lmafpyilla
       61 laiva
//
LOCUS       WP_257973858             226 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257973858
VERSION     WP_257973858.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 226)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>226
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
     Region          1..>225
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 manqtiqssa laddeidlgk lfgilidakw fiisitlffa tlgiavalls tpiykadali
       61 qiekkssggi samvgdmgel fsaessatte ieiiksrmil gdtvdkfnlt tiatpdylpf
      121 vgkglaring tqnyislttf evprtargls hqliatdiek gqfslmledq mvlsgsvgql
      181 iemngyrvkv nqlnaqnedt ftiskiskld ainklasqls isergs
//
LOCUS       WP_257973897              82 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Vibrio parahaemolyticus].
ACCESSION   WP_257973897
VERSION     WP_257973897.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 82)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 82)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>82
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          <1..>77
                     /region_name="VI_Rhs_Vgr"
                     /note="type VI secretion system Vgr family protein;
                     TIGR03361"
                     /db_xref="CDD:274542"
ORIGIN      
        1 elkntypqys ykvqyeesdl afvqrllaee glsfcfshsk sshvldifdd vsfykpspef
       61 mvdfdtgsse sshisawnet qv
//
LOCUS       WP_257973860             593 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257973860
VERSION     WP_257973860.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 593)
  AUTHORS   Clarke,T.A., Edwards,M.J., Gates,A.J., Hall,A., White,G.F.,
            Bradley,J., Reardon,C.L., Shi,L., Beliaev,A.S., Marshall,M.J.,
            Wang,Z., Watmough,N.J., Fredrickson,J.K., Zachara,J.M., Butt,J.N.
            and Richardson,D.J.
  TITLE     Structure of a bacterial cell surface decaheme electron conduit
  JOURNAL   Proc Natl Acad Sci U S A 108 (23), 9384-9389 (2011)
   PUBMED   21606337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037016.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17963.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..593
                     /product="Ig-like domain-containing protein"
     Region          49..280
                     /region_name="Peptidase_M11"
                     /note="Gametolysin peptidase M11; cl21618"
                     /db_xref="CDD:354892"
     Region          346..>537
                     /region_name="COG1470"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:441079"
     Region          492..565
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
ORIGIN      
        1 nkhalnkgif fllvlflflq niqyakaags sigrqdtlvm llnfkenpnd qpitseeaha
       61 lvfgevndfy qensygktwl sgqvagwytl pvsnqvcdyp svqaeadkma radgvvledy
      121 qriiyimtqs gcagggsatt gktfpsrayi dgtlsarvia hefghnlgls hakaldcgda
      181 svsnncsaie ygdsydvmgt pdmgyintyy kermgwlnda espniltatq dglyeiaeye
      241 tqditqnial kiprgvnsnt glkewfyvey rqamgydqfl ddrsymlfrg dvtdgvivrl
      301 veegaeesyi lhmkpnsdys qvygrkdwkd talpvgdsft dpvsgltinl asaangfagv
      361 nvsfggsvtp svcemsapsv svkatsdtqv nagdtveyql tvtntandvc gtirfdvsaq
      421 vesgwqassq sislasgess vatiavtsal satsgdypmt fnvvntkdea ynvatqatya
      481 vaeqqtgsgd vvavddnvqm skvstvsinv lgndiiadgv sveisamsap skgtvkllsd
      541 gsiqytpakr fknqdsfsyt itsgnvtsta mvtvalqssp dsggsspgkg knk
//
LOCUS       WP_257973918             209 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase family protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257973918
VERSION     WP_257973918.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 209)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00725.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..209
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
     Region          <2..207
                     /region_name="fadB"
                     /note="fatty acid oxidation complex subunit alpha FadB;
                     PRK11730"
                     /db_xref="CDD:183293"
ORIGIN      
        1 lafnqlltdg adistvdkim tkqfgwpmgp amlldvigld ttahcvdvmd aafperlqkp
       61 ekniiqtlvd egyfgqknrq gfyqhvvdrk grlkpqrstq sdeliaqlaa sqcdddaetv
      121 mmrlmlpmmf eavrcldegi vaspeeadia mlygtgfpaf rgglfyymdq lgiekliswa
      181 etfkhlgtly qipasvlkra qqkqtfytk
//
LOCUS       WP_257973949             102 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6279 family lipoprotein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257973949
VERSION     WP_257973949.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039714.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19795.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>102
                     /product="DUF6279 family lipoprotein"
     Region          8..>102
                     /region_name="DUF6279"
                     /note="Family of unknown function (DUF6279); pfam19795"
                     /db_xref="CDD:437627"
ORIGIN      
        1 fvieylddyv slndeqetll eerlllladw hkkeelplyi dhlkelenid annitlaflq
       61 qnrekmkahy drivsrsapd lfslslqltp kqqqeflqnv rk
//
LOCUS       WP_257973961             688 aa            linear   BCT 02-MAR-2025
DEFINITION  SLBB domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257973961
VERSION     WP_257973961.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 688)
  AUTHORS   Burroughs,A.M., Balaji,S., Iyer,L.M. and Aravind,L.
  TITLE     A novel superfamily containing the beta-grasp fold involved in
            binding diverse soluble ligands
  JOURNAL   Biol Direct 2, 4 (2007)
   PUBMED   17250770
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022007.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10531.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..688
                     /product="SLBB domain-containing protein"
                     /calculated_mol_wt=75139
     Region          12..172
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          199..248
                     /region_name="SLBB"
                     /note="SLBB domain; pfam10531"
                     /db_xref="CDD:463136"
     Region          <288..367
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          <381..460
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          <475..569
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          <577..664
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
ORIGIN      
        1 mcvlawvtpl haadndtvkv gdlvqinlpg easlnqgfqv drrgrinlpe igpvfvagyn
       61 eqqlqdviie tlktvyrdvn narvfikqkq llvsvqgyvv kpgeytlpag sniqmfvyea
      121 gglragaqld kmivkrgdqn iefdykrfld tgdnsqlpkl esldvlfvpa splvgnieqe
      181 fdaaklansg dsadsaraik vfgevnapgs ftykpnttlv dvvmraggvt ryasveqirv
      241 itnntptmfn lktyldtgdq sllpeilpga tifvpkqeee ikaganvvyi mgevahpgay
      301 egkqgasfmd ilanaggptr yaesrqirvi kadgqvikfd ltahteglss vappkvsagd
      361 aifvpektdf nekswlkvap sravavmgev vrpgriewsd emdlidllah vggptrradt
      421 skievanngq mtnfdldqyi ldgspasnlp rvsagtvvrv halpddpsdn ksqwvsqssd
      481 asiyvfgqin apgryrftde mhfldilsaa dgptmdadih nirvthrglg yakvsklnls
      541 myfetgdesi lpdvrpgdti yipeknknwl drskestvrv lgevrdpgry vfndnmtvld
      601 llaeaggptn saylekisiv nmsccqgqar tfdlvnfskt aniydlpvir agdtiyiphk
      661 desfaekara glrdilqitt tivligal
//
LOCUS       WP_257973967             407 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257973967
VERSION     WP_257973967.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040192.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19078.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>407
                     /product="Ig-like domain-containing protein"
     Region          174..273
                     /region_name="Big_12"
                     /note="Bacterial Ig-like domain; pfam19078"
                     /db_xref="CDD:436946"
     Region          282..>407
                     /region_name="tail_200_repeat"
                     /note="tandem large repeat; NF032891"
                     /db_xref="CDD:467960"
ORIGIN      
        1 sidlvpstgd tlnfsgnivs stgsdtmvfd aedqteymyk vtvtdsigrs itdfelfstt
       61 ygakgitsiv dyelpaisgv sadqvsmtpt dgkydldvta yvtdknlssv tstadngsgv
      121 kvgpqsvtep vsvgdpyvmh ysltpgtytl qvaaldlanh ktekstsatv kaatvpelti
      181 stassspsag gveipltftf seevkefsfs dvkleasdkn eagklqqvsw ntsdnitwta
      241 tyttpekqnk eiiirvddds yesvnsipgk gdslileveg vlptlskvtf dpkhqaigqs
      301 vnitlefdke vqeataklgn ndvtslvata nkkiwtgrae vpnipelnvg lvvskykdli
      361 gnmgeddssn ampitptlai tpvgnvdssn aatlqitgts srfdgqt
//
LOCUS       WP_257974026              49 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF5960 family protein, partial [Enterococcus].
ACCESSION   WP_257974026
VERSION     WP_257974026.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus
  ORGANISM  Enterococcus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040275.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19385.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..49
                     /organism="Enterococcus"
                     /db_xref="taxon:1350"
     Protein         1..>49
                     /product="DUF5960 family protein"
ORIGIN      
        1 mlmegkiqlw fkfdpsnrfi kdfykvwdse vfflaiedsl linlyysnk
//
LOCUS       WP_257974028             409 aa            linear   BCT 02-MAR-2025
DEFINITION  primase C-terminal domain-containing protein [Enterococcus
            faecium].
ACCESSION   WP_257974028
VERSION     WP_257974028.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 409)
  AUTHORS   Iyer,L.M., Koonin,E.V., Leipe,D.D. and Aravind,L.
  TITLE     Origin and evolution of the archaeo-eukaryotic primase superfamily
            and related palm-domain proteins: structural insights and new
            members
  JOURNAL   Nucleic Acids Res 33 (12), 3875-3896 (2005)
   PUBMED   16027112
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020291.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08708.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..409
                     /product="primase C-terminal domain-containing protein"
                     /calculated_mol_wt=47338
     Region          213..276
                     /region_name="PriCT_1"
                     /note="Primase C terminal 1 (PriCT-1); pfam08708"
                     /db_xref="CDD:430166"
     Region          346..>389
                     /region_name="IscR"
                     /note="DNA-binding transcriptional regulator, IscR family
                     [Transcription]; cl46820"
                     /db_xref="CDD:481160"
ORIGIN      
        1 miggrgvvlt seeaihenkd tfthwtpnvy rygtyadenr sytkghsenn lrqintffid
       61 fdihtaketi sasdilttai dlgfmptmii ksdkgyqayf vletpvyvts ksefksvkaa
      121 kiisqnirey fgkslpvdlt cnhfgtarip rtdnveffdp nyrysfkewq dwsfkqtdnk
      181 gftrssltvl sgtkgkkqvd epwfnlllhe tkflgekdlv grnsvmftls layfssgysi
      241 etceynmfef nnrldqplee kevikivrsa ysenyqganr eyitilckaw vssdltskdl
      301 fvrqgwfkfk kkrserqrvh lsewkkdlma yiseksdvyk pylvttkkei retlgipert
      361 ldkllkvlka nqeiffkiks grnggiqlas vkslllsiik vkkkkkkai
//
LOCUS       WP_257974034             688 aa            linear   BCT 02-MAR-2025
DEFINITION  SLBB domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257974034
VERSION     WP_257974034.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 688)
  AUTHORS   Burroughs,A.M., Balaji,S., Iyer,L.M. and Aravind,L.
  TITLE     A novel superfamily containing the beta-grasp fold involved in
            binding diverse soluble ligands
  JOURNAL   Biol Direct 2, 4 (2007)
   PUBMED   17250770
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022007.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10531.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..688
                     /product="SLBB domain-containing protein"
                     /calculated_mol_wt=75176
     Region          12..172
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          199..248
                     /region_name="SLBB"
                     /note="SLBB domain; pfam10531"
                     /db_xref="CDD:463136"
     Region          <288..367
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          <381..460
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          <475..569
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          <577..664
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
ORIGIN      
        1 mcvlawvtpl haadndtvkv gdlvhinlpg easlnqgfqv drrgrinlpe igpvfvagyn
       61 eqqlqdviie tlktvyrdvn narvfikqqq llisvqgyvv kpgeytlpag sniqmfvyea
      121 gglragaqld kmivkrgdqn iefdykrfld tgdnsqlpkl esldvlfvpa splvgnieqe
      181 fdaaklansg dsadsaraik vfgevnapgs ftykpnttlv dvvmraggvt ryasveqirv
      241 itnntptmfn lktyldtgdq sllpeilpga tifvpkqeee ikaganvvyi mgevahpgay
      301 egkqgasfmd ilanaggptr yaesrqirvi kadgqvikfd ltahteglss vappkvsagd
      361 aifvpektdf nekswlkvap sravavmgev vrpgriewsd emdlidllah vggptrradt
      421 skievanngq mtnfdldqyi ldgspasnlp rvsagtvvrv halpddpsdn ksqwvsqssd
      481 asiyvfgqin apgryrftde mhfldilsaa dgptmdadih nirvthrglg yakvsklnls
      541 myfetgdesi lpdvrpgdti yipeknknwl drskestvrv lgevrdpgry mfndnmtvld
      601 llaeaggptn saylekisiv nisccqgqar tfdlvnfskt aniydlpvir agdtiyiphk
      661 desfaekara glrdilqitt tivligal
//
LOCUS       WP_257974054              94 aa            linear   BCT 02-MAR-2025
DEFINITION  cystatin domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974054
VERSION     WP_257974054.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012261.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00031.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..94
                     /product="cystatin domain-containing protein"
                     /GO_function="GO:0004869 - cysteine-type endopeptidase
                     inhibitor activity [Evidence IEA]"
     Site            order(12,49..51,53)
                     /site_type="active"
                     /note="putative proteinase inhibition site [active]"
                     /db_xref="CDD:238002"
     Region          18..>65
                     /region_name="CY"
                     /note="Cystatin-like domain; Cystatins are a family of
                     cysteine protease inhibitors that occur mainly as single
                     domain proteins. However some extracellular proteins such
                     as kininogen, His-rich glycoprotein and fetuin also
                     contain these domains; cl09238"
                     /db_xref="CDD:447698"
ORIGIN      
        1 advcntqgnm pggwnefdat pdaqkamafv lkqmdtlssf kqiltvhaqi vsgvnyaief
       61 emddgsiwnt ivyrnldgey aitqspkegh fceq
//
LOCUS       WP_257974062             120 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6058 family natural product biosynthesis protein, partial
            [Vibrio parahaemolyticus].
ACCESSION   WP_257974062
VERSION     WP_257974062.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 120)
  AUTHORS   Qin,Z., Munnoch,J.T., Devine,R., Holmes,N.A., Seipke,R.F.,
            Wilkinson,K.A., Wilkinson,B. and Hutchings,M.I.
  TITLE     Formicamycins, antibacterial polyketides produced by Streptomyces
            formicae isolated from African Tetraponera plant-ants
  JOURNAL   Chem Sci 8 (4), 3218-3227 (2017)
   PUBMED   28507698
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039336.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19531.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..120
                     /product="DUF6058 family natural product biosynthesis
                     protein"
     Region          1..116
                     /region_name="DUF6058"
                     /note="Family of unknown function (DUF6058); pfam19531"
                     /db_xref="CDD:437363"
ORIGIN      
        1 eefsnrysra lsvlkgskce vvtpglneii medwehflqg tyglctqtgl pediaakgfa
       61 veqikaller dvldsneikr leyfvnlldn asspfapher lnssrhrlvn evrrkyklqs
//
LOCUS       WP_257974068             156 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257974068
VERSION     WP_257974068.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>156
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          <1..>156
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 tgaaqmdggi lvvaatdgpm pqtrehillg rqvgipyiiv fmnkcdmvdd eellelveme
       61 vrellseydf pgddlpviqg salgalngee qweakivela ealdtyipep eravdqpflm
      121 piedvfsiqg rgtvvtgrie rgiltvgdev aivgik
//
LOCUS       WP_257974083              86 aa            linear   BCT 02-MAR-2025
DEFINITION  rhodanese-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974083
VERSION     WP_257974083.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 86)
  AUTHORS   Gliubich,F., Gazerro,M., Zanotti,G., Delbono,S., Bombieri,G. and
            Berni,R.
  TITLE     Active site structural features for chemically modified forms of
            rhodanese
  JOURNAL   J Biol Chem 271 (35), 21054-21061 (1996)
   PUBMED   8702871
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00581.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..86
                     /product="rhodanese-like domain-containing protein"
     Region          4..81
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            51
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238089"
ORIGIN      
        1 nltedqilld vrnpgelesv gylegainip vdqlrhrmge lpkdkeiviy cqvglrgnva
       61 yrqlvnngyk arnliggyrt ylhskv
//
LOCUS       WP_257974092             529 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974092
VERSION     WP_257974092.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>529
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          248..338
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          340..430
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          425..520
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq plpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi titteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnaendvit teedtavtid vlvndsdveg dvlniqsasv pseqgsvdiv
      301 dgklvftpae nfngeatity ivtdgdltde akvtvtvtpv ndspvavddt vstqedtvvt
      361 idvlpndsdv dgdklsiqsa svpeaqgkve ivegklvftp aenfngdaei tytvtdgqlt
      421 deakvtvtvn pvndapiikv eavesiteda vntdtvvatl tvrdtdtped qltvslenns
      481 ngyfvlvgde vkltqagvda vnndelnlkd ltisasvsdg vnptandsd
//
LOCUS       WP_257974146             141 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar phosphate nucleotidyltransferase, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974146
VERSION     WP_257974146.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   Jensen,S.O. and Reeves,P.R.
  TITLE     Domain organisation in phosphomannose isomerases (types I and II)
  JOURNAL   Biochim Biophys Acta 1382 (1), 5-7 (1998)
   PUBMED   9507048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012695.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00483.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>141
                     /product="sugar phosphate nucleotidyltransferase"
                     /GO_function="GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <1..>141
                     /region_name="glgC"
                     /note="glucose-1-phosphate adenylyltransferase;
                     Provisional; PRK00844"
                     /db_xref="CDD:234846"
ORIGIN      
        1 krwyegtada iyqnlrfmel eepdqvcifg sdhiykmdik qmlnfhtekk asltvsalrm
       61 plkeasqfgv ievdaegrmi gfeekpanpk sipgepdfal vsmgnyvfea qvlfselved
      121 adneasshdf gkdiipkmfp r
//
LOCUS       WP_257974165             430 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257974165
VERSION     WP_257974165.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>430
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          24..430
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(31..32,35..36,39,71,122..123,125..127,130,150,
                     153..154,157,295,298..299,302..304,307,335,339,392..393,
                     397,401,417,420..421,424..425,428)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mqpfanmmnq kvnntnkwlt llilcaaqvg tsgdnstvgv sasaltqlfg asmdqlqman
       61 atysliagal miagglmgli lgwrksfrig lvllcisevi aafspnihvf iygarvltga
      121 gasltipavl gliagnyqgk dqaiafsala aasgiaaavm pvvfgtlldv vgfkltylll
      181 svifalvlaa svkvqdvevs aqkpkldivg vmlaaiglll vivgtlktpv wgimspitdf
      241 svvglspali mmvaglvvla lllmwekrye akgglalipa kiiynkqvqt glymgalfwv
      301 gsaapvaitv pymqlvayys aaqagmtlig mslgtvlvam llpaklshlk vktvcavsli
      361 gaaiasfims lgleaggvns llivgqtlmg csvgamasqc siivtdaldp veaqqsggiq
      421 atvrnigyav
//
LOCUS       WP_257974218             115 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974218
VERSION     WP_257974218.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 115)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>115
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
     Region          1..>114
                     /region_name="GumC"
                     /note="Exopolysaccharide export protein/domain GumC/Wzc1
                     [Cell wall/membrane/envelope biogenesis]; COG3206"
                     /db_xref="CDD:442439"
ORIGIN      
        1 mngthpnnfq mnkvelirfg hhfktlkknw fsiaaftlif sltctwyiys ktsiyqatat
       61 lliqeeqksa lsieevygvd ttkkeyfqtq iailksnhia dkvinelnlt qhpef
//
LOCUS       WP_257974228             118 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6058 family natural product biosynthesis protein, partial
            [Vibrio parahaemolyticus].
ACCESSION   WP_257974228
VERSION     WP_257974228.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 118)
  AUTHORS   Qin,Z., Munnoch,J.T., Devine,R., Holmes,N.A., Seipke,R.F.,
            Wilkinson,K.A., Wilkinson,B. and Hutchings,M.I.
  TITLE     Formicamycins, antibacterial polyketides produced by Streptomyces
            formicae isolated from African Tetraponera plant-ants
  JOURNAL   Chem Sci 8 (4), 3218-3227 (2017)
   PUBMED   28507698
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039336.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19531.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..118
                     /product="DUF6058 family natural product biosynthesis
                     protein"
     Region          1..114
                     /region_name="DUF6058"
                     /note="Family of unknown function (DUF6058); pfam19531"
                     /db_xref="CDD:437363"
ORIGIN      
        1 fsnrysrals vlkgskceva tpgvheiime dwehflqgty glctqtglpe diaakgfave
       61 qikallerdv ldsneikrle yfvnlldnas spfapherln ssrhrlvnev rrkyklqs
//
LOCUS       WP_257974261             175 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974261
VERSION     WP_257974261.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 175)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..175
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <2..155
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 hfgihyfpln lnknlvqrkv gkdmsvmvcr kdhpinnesi sletiasypl aihlqkhwne
       61 rqdklsrlll shgidfkvkl ktthinviin avettdllfp csiyiaeqlg ekfsyitssd
      121 evflplqeke fgfiydkayk ndpmivwlhs tisklmndfl dvynkkfdsr yeksr
//
LOCUS       WP_257974237              73 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphoribosyltransferase family protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974237
VERSION     WP_257974237.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 73)
  AUTHORS   Islam,M.R., Kim,H., Kang,S.W., Kim,J.S., Jeong,Y.M., Hwang,H.J.,
            Lee,S.Y., Woo,J.C. and Kim,S.G.
  TITLE     Functional characterization of a gene encoding a dual domain for
            uridine kinase and uracil phosphoribosyltransferase in Arabidopsis
            thaliana
  JOURNAL   Plant Mol Biol 63 (4), 465-477 (2007)
   PUBMED   17143579
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012383.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00156.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..73
                     /product="phosphoribosyltransferase family protein"
                     /GO_process="GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
     Region          <2..73
                     /region_name="PRK11595"
                     /note="DNA utilization protein GntX; Provisional"
                     /db_xref="CDD:183221"
ORIGIN      
        1 lrtrdtlaqi tlkrnyrhsn lngaftltgs vvgqhiaiid dvlttgatmq taaqllicag
       61 aqtvqawtic rtl
//
LOCUS       WP_257974268             199 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974268
VERSION     WP_257974268.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 199)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>199
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
     Region          17..>199
                     /region_name="GumC"
                     /note="Exopolysaccharide export protein/domain GumC/Wzc1
                     [Cell wall/membrane/envelope biogenesis]; COG3206"
                     /db_xref="CDD:442439"
     Region          17..>90
                     /region_name="WzzB"
                     /note="LPS O-antigen chain length determinant protein,
                     WzzB/FepE family [Cell wall/membrane/envelope biogenesis];
                     COG3765"
                     /db_xref="CDD:442979"
ORIGIN      
        1 mepqkepnpn ylpyppqpqs sddeidlrel fkalwkgkwi iilitfvltl gavvyslslp
       61 niykadalla paensngggl skmagqlggl aalagvnlgg gessqaelai qvmksrkfid
      121 sfikkhqllv plmaskgwdi asnqlifdes vynsenntwl rkpeglrgak pteqeaiemf
      181 sknifnvsln kdsglynis
//
LOCUS       WP_257974279             156 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein, partial
            [Vibrio parahaemolyticus].
ACCESSION   WP_257974279
VERSION     WP_257974279.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>156
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <1..>156
                     /region_name="type_I_sec_HlyB"
                     /note="type I secretion system ABC transporter, HlyB
                     family; TIGR01846"
                     /db_xref="CDD:273831"
ORIGIN      
        1 lvesvtaint ikamavspqm tniwdkqlag yvaagfkvtv lstigqqgiq liqktvmiin
       61 lwlgahlvis gelsigqlia fnmlagqivs pvirlaqlwq dfqqvgisvt rlgdvlnspt
      121 esykgkltlp eikgditfrn irfrytpdsp vilsdi
//
LOCUS       WP_257974311             267 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6279 family lipoprotein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257974311
VERSION     WP_257974311.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039714.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19795.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..267
                     /product="DUF6279 family lipoprotein"
     Region          26..219
                     /region_name="DUF6279"
                     /note="Family of unknown function (DUF6279); pfam19795"
                     /db_xref="CDD:437627"
ORIGIN      
        1 villagctkk flysnidwfv ieylddyvsl ndeqetllee rlllladwhk keelplyidh
       61 lkeleninan nitlaflqqn rekmkahydr ivsrsapdlf slslqltpkq qqeflqnvrk
      121 dyqernakya dkteaeirei ilenteewme ewigelnsdq kryakqisqq tilnsplwrn
      181 yrasiyqele ylfenqsnsv vyqqvfmqll fepesyyseq lsenidhnlg lvdqltlnva
      241 ksmtdkqwih fhnkvkewrv laeelqd
//
LOCUS       WP_257974331             914 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6701 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974331
VERSION     WP_257974331.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042738.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20419.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..914
                     /product="DUF6701 domain-containing protein"
     Region          419..908
                     /region_name="DUF6701"
                     /note="Family of unknown function (DUF6701); pfam20419"
                     /db_xref="CDD:466568"
ORIGIN      
        1 nkrislrsls velkvnneqa ssiedyqnkh tviygdlmsa yptklhnvli dgdieltgst
       61 lhidgkynti igkilthstt difnanvcgt ieskghqlhl ktkhpfqqhf vvgdivahss
      121 lliddmavyg tteskgasaa lngsfyakdt aikyfqtlnf nqgvgsqvcg eiqqtpgssh
      181 phsltgkysq fcgvgqsrcd ysssicpsta tpppecsmlp psnddlgltv kpsddmalmc
      241 gddlpqftai ttnndevvsa pvmamlsdpd lftlevvkgk ptstenqfqs ndsgelvvrv
      301 ipndidkial danyyltftm vgdsakeqtv nfmftpfmfe aysnerrtln eirviagkpe
      361 nvhtrllaca stgepivasn yngkpkvvhp likplggseg dfsysaefkd glsehglitn
      421 esglfevtls dqfeckgfse cpddgtvevt gkfnvysrpw tlaicenqnt lpsgtseqgd
      481 kfiaagehfs ltvkpviwqk ggsisdpids saycdalvtt nfmhdgapaa svvlsseqhs
      541 pldtanqtst llksnyaltq ghqsaknhrf vfnglywaev gslkvkanlg styfgmkvne
      601 gyrhigrfyp kyfkvqsqdw typknqgfvy mnqpfekvty dvvalnanke dvknyahfap
      661 slqqhfylge lggyqdrfvp papqkaewkr igdasigqfv iekastnatc hnspcwekdi
      721 tkgqypdgpf nrgsnskssk iglvtthvvd evnffdggei ltkqpdirfg rlnfkdvggn
      781 qgmkikvpld vevwqngrfv tnfddnstta ngayytstpi wsnapvnnaq lsgvakmsvg
      841 rtndiiasqi daareqiqfs lnldhsgnql pwlkydwets tpeeenppti vtfgihrgnd
      901 riiyrgepnm lgln
//
LOCUS       WP_257974346              80 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974346
VERSION     WP_257974346.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 80)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>80
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
     Region          1..>71
                     /region_name="GumC"
                     /note="Exopolysaccharide export protein/domain GumC/Wzc1
                     [Cell wall/membrane/envelope biogenesis]; COG3206"
                     /db_xref="CDD:442439"
ORIGIN      
        1 mngthpnnfq mnkvelirfg hhfktlkknw lsiaaftlif sltctwyiys ktsiyqatat
       61 lliqeeqksa lsieevygvd
//
LOCUS       WP_257974341             271 aa            linear   BCT 02-MAR-2025
DEFINITION  PAAR-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974341
VERSION     WP_257974341.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 271)
  AUTHORS   Santos,M.N.M., Cho,S.T., Wu,C.F., Chang,C.J., Kuo,C.H. and Lai,E.M.
  TITLE     Redundancy and Specificity of Type VI Secretion vgrG Loci in
            Antibacterial Activity of Agrobacterium tumefaciens 1D1609 Strain
  JOURNAL   Front Microbiol 10, 3004 (2020)
   PUBMED   31993035
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 271)
  AUTHORS   Pissaridou,P., Allsopp,L.P., Wettstadt,S., Howard,S.A.,
            Mavridou,D.A.I. and Filloux,A.
  TITLE     The Pseudomonas aeruginosa T6SS-VgrG1b spike is topped by a PAAR
            protein eliciting DNA damage to bacterial competitors
  JOURNAL   Proc Natl Acad Sci U S A 115 (49), 12519-12524 (2018)
   PUBMED   30455305
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025047.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13665.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>271
                     /product="PAAR-like domain-containing protein"
     Region          22..128
                     /region_name="Tox-PAAR-like"
                     /note="Toxin PAAR-like domain; pfam13665"
                     /db_xref="CDD:433390"
     Region          157..>202
                     /region_name="SpaA"
                     /note="Prealbumin-like fold domain; pfam17802"
                     /db_xref="CDD:465513"
ORIGIN      
        1 mgvtvgangl sivhkgsgge anatlpdvcl tkvgkpivpi pygnnaksad laggtttism
       61 dggnsvaikg stfskstgda ggdkkgvasg tieaeakfis asptvkfegk gvcrlsdqmt
      121 mnkantmcls gaqnpsvsvt eeqegtytld iecrypdgep lanakfkvfd gnnaeigsgv
      181 ldsngrssvs slppgecyvv yeedsrkyea ktsrglnghk yewsddelfa hcakeklpfw
      241 eprsvdsvrs twgvfdenlg sdkdfismla t
//
LOCUS       WP_257974186              30 aa            linear   BCT 02-MAR-2025
DEFINITION  HlyU family transcriptional regulator, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974186
VERSION     WP_257974186.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 30)
  AUTHORS   Liu,M., Naka,H. and Crosa,J.H.
  TITLE     HlyU acts as an H-NS antirepressor in the regulation of the RTX
            toxin gene essential for the virulence of the human pathogen Vibrio
            vulnificus CMCP6
  JOURNAL   Mol Microbiol 72 (2), 491-505 (2009)
   PUBMED   19320834
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021620.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10115.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..30
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>30
                     /product="HlyU family transcriptional regulator"
     Region          2..>30
                     /region_name="HlyU"
                     /note="Transcriptional activator HlyU; cl02273"
                     /db_xref="CDD:470516"
ORIGIN      
        1 mgffsrlfgg sektaevkti epveykgfli
//
LOCUS       WP_257974366             287 aa            linear   BCT 02-MAR-2025
DEFINITION  sodium:solute symporter family transporter, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974366
VERSION     WP_257974366.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012686.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00474.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>287
                     /product="sodium:solute symporter family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /note="Members of the Solute:Sodium Symporter (SSS), TC
                     2.A.21 as described in tcdb.org, catalyze solute:Na+
                     symport. Known solutes for members of the family include
                     sugars, amino acids, nucleosides, inositols, vitamins,
                     urea or anions, depending on the system.; Members of the
                     Solute:Sodium Symporter (SSS), TC 2.A.21 as described in
                     tcdb.org, catalyze solute:Na+ symport. Known solutes for
                     members of the family include sugars, amino acids,
                     nucleosides, inositols, vitamins, urea or anions,
                     depending on the system.; Members of the Solute:Sodium
                     Symporter (SSS), TC 2.A.21 as described in tcdb.org,
                     catalyze solute:Na+ symport. Known solutes for members of
                     the family include sugars, amino acids, nucleosides,
                     inositols, vitamins, urea or anions, depending on the
                     system."
     Region          <1..>287
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
ORIGIN      
        1 myifvnltsv lylgglalet ilgiplmysi lglalfalvy siygglsavv wtdviqvffl
       61 vlggfmttym avsfiggtdg wfaglskmvd aapghfemil dqsnpqymnl pgiavliggl
      121 wvanlyywgf nqyiiqrtla aksvseaqkg ivfaaflkli vpflvvlpgi aayvitsdpq
      181 lmaslgdiaa tnlpsaanad kaypwltqfl pvgvkgvvfa alaaaivssl asmlnstati
      241 ftmdiykeyi spdsgdhklv nvgrtaavva liiacliapm lggigqa
//
LOCUS       WP_257974383              65 aa            linear   BCT 02-MAR-2025
DEFINITION  pilin, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257974383
VERSION     WP_257974383.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012342.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00114.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>65
                     /product="pilin"
                     /GO_component="GO:0009289 - pilus [Evidence IEA]"
                     /GO_process="GO:0007155 - cell adhesion [Evidence IEA]"
ORIGIN      
        1 mmiqsegtis ggvsalggsa shalgtisas gseikftfnt gslnnkkitl tknpstgwac
       61 tydtg
//
LOCUS       WP_257974395             721 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257974395
VERSION     WP_257974395.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 721)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..721
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=78036
     Region          <83..353
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          342..416
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); cl02708"
                     /db_xref="CDD:445894"
     Region          430..508
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); cl02708"
                     /db_xref="CDD:445894"
     Region          <611..>675
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllltslfg cnsdsgssts qppmslpeev lpdepeieap ipelpvpefp diskpevpet
       61 pevtppepse pvipeppvpd kvvsrialnq srvslaegel aqvkvigfyn dgtqddltsq
      121 vvwnvenadi vnidergvit alktgvsvir adldefssem tvqvvdaklt niyfdlphka
      181 iakglsfqak aygeytdkqt rdishlvewd stdcsvvmpg tngiftaqde gdadiyaeid
      241 gltsthgsit vtpavlvsmd isstalempl gthkslvvmg tlsdgeqvdl trgitwhvdn
      301 dvveivdnvv kakhkgtavv taaldgvqse piqvqvtdai ltnievttna ssvakgnstl
      361 lsaqgvysde srvelteqva wwvdnqdvlq legarvkgla vgqamvyatk daitsaplqi
      421 qvtnavleki hvhpseitle eknvqrfyay geysdettqd vthrvtwrss nkavldliag
      481 glsnsaqlgs vtisaslgel kgtsevkvve seekesaisi cpqprsgegs aeaclmvasd
      541 edgrlftapp svklmnklgy elvkplsyda tkpktyvgik tedgtrgpvg dfamfnqygr
      601 dragltsqya nwchdlsvrn fagrdnwrra trnelfslyr asrgsvwdgt esiyeedkdg
      661 ggfgwpanse ywstslmdlp hhegvvydii nlhrgraqlv mdardpayas cvsdapgvpl
      721 k
//
LOCUS       WP_257974403              73 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6037 family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257974403
VERSION     WP_257974403.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 73)
  AUTHORS   Lin,W.S., Cunneen,T. and Lee,C.Y.
  TITLE     Sequence analysis and molecular characterization of genes required
            for the biosynthesis of type 1 capsular polysaccharide in
            Staphylococcus aureus
  JOURNAL   J Bacteriol 176 (22), 7005-7016 (1994)
   PUBMED   7961465
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039331.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19503.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>73
                     /product="DUF6037 family protein"
     Region          1..>73
                     /region_name="DUF6037"
                     /note="Family of unknown function (DUF6037); pfam19503"
                     /db_xref="CDD:466110"
ORIGIN      
        1 ieafpfeykn idyvvlvkly qehevklnry allkveflka ndiddnleve anvrelltda
       61 rtlreyfgie wae
//
LOCUS       WP_257974416              74 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257974416
VERSION     WP_257974416.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>74
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
     Region          <2..74
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mfvlssryeg lgmvlleama hslacisfdc pagpktiids gingvlvptc dveqlsfeis
       61 hmiddaefre rvsk
//
LOCUS       WP_257974417              69 aa            linear   BCT 02-MAR-2025
DEFINITION  deaminase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257974417
VERSION     WP_257974417.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 69)
  AUTHORS   Iyer,L.M., Zhang,D., Rogozin,I.B. and Aravind,L.
  TITLE     Evolution of the deaminase fold and multiple origins of eukaryotic
            editing and mutagenic nucleic acid deaminases from bacterial toxin
            systems
  JOURNAL   Nucleic Acids Res 39 (22), 9473-9497 (2011)
   PUBMED   21890906
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025793.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14437.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>69
                     /product="deaminase"
                     /GO_function="GO:0008251 - tRNA-specific adenosine
                     deaminase activity [Evidence IEA]"
                     /GO_process="GO:0002100 - tRNA wobble adenosine to inosine
                     editing [Evidence IEA]"
     Region          1..>69
                     /region_name="RibD1"
                     /note="Riboflavin biosynthesis protein RibD, pyrimidine
                     deaminase domain [Coenzyme transport and metabolism];
                     COG0117"
                     /db_xref="CDD:439887"
ORIGIN      
        1 kngyvvaegh tqsvggnhae vealnsyngs megvtayvtl epcsfvgrtp acantlvnfg
       61 vksvvvaml
//
LOCUS       WP_257974423             527 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974423
VERSION     WP_257974423.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>527
                     /product="cadherin-like domain-containing protein"
     Region          <26..81
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          113..208
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          <165..503
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
ORIGIN      
        1 mtstdvgpld lnvqltqeqg skdvtddvlq iisaieqgqd psavdeefap aagenggssl
       61 qtsativrdg tellastsfe tigieslgls qtqvlalndl frsnlqtsad stdkplattp
      121 vtldaieedg gsiiitteel lsnvddedkd tlsvenliid kgngtlvdng dgtwtftpqi
      181 dddtevsftf diiddedlvv sgsanldilp indapnaknd vitteedtav tidvlvndsd
      241 vegdvlsiqs asvpseqgsv givdgklvft paenfngeat ityivtdgdl tdeakvtvtv
      301 tpvndspvav ddttsiqedt avtidvltnd tdvdgdklsi esasvpkeqg tvevvdgklv
      361 ftpaenfngd aeitytvtdg eltdeakvtv tvnpvndvpt ikveavesit edavstdtvv
      421 atltvrdtdt pedqltvsle nnsngyfvlv gdevkltqag vdavnndeln lkgltisasv
      481 sdgvnptasd sdslivnrvn daptikvdav qsitedavst dtvvatl
//
LOCUS       WP_257974505             182 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974505
VERSION     WP_257974505.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 182)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>182
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
     Region          1..>88
                     /region_name="WzzB"
                     /note="LPS O-antigen chain length determinant protein,
                     WzzB/FepE family [Cell wall/membrane/envelope biogenesis];
                     COG3765"
                     /db_xref="CDD:442979"
ORIGIN      
        1 mesqkephpn ylpritqstd deinlsqlfk alwrgkwiii attfifaiss vfyslslpni
       61 yradallapa essnggglte magqlgglaa lagvnfggae ssqtdlavqv mksrefissf
      121 vnkhnllvpl maakdwdlan nklilneely nedenkwlrk pqglrgaeps eqeafevfik
      181 ev
//
LOCUS       WP_257974522              69 aa            linear   BCT 02-MAR-2025
DEFINITION  AraC family ligand binding domain-containing protein, partial
            [Vibrio parahaemolyticus].
ACCESSION   WP_257974522
VERSION     WP_257974522.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 69)
  AUTHORS   Soisson,S.M., MacDougall-Shackleton,B., Schleif,R. and Wolberger,C.
  TITLE     Structural basis for ligand-regulated oligomerization of AraC
  JOURNAL   Science 276 (5311), 421-425 (1997)
   PUBMED   9103202
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02311.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>69
                     /product="AraC family ligand binding domain-containing
                     protein"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
     Region          2..>69
                     /region_name="PRK13503"
                     /note="HTH-type transcriptional activator RhaS"
                     /db_xref="CDD:184094"
ORIGIN      
        1 mnsnspvtte lrapqepype hahsfeeiii vsegcgthvm ndvpmnlskn yvcfvkkedr
       61 hlfdtvddl
//
LOCUS       WP_257974569             246 aa            linear   BCT 02-MAR-2025
DEFINITION  GMC oxidoreductase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257974569
VERSION     WP_257974569.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05199.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..246
                     /product="GMC oxidoreductase"
                     /GO_function="GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
     Region          <1..239
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 gligtewilt rkglgatnhf escafirsre glkwpniqyh flpaamrydg qaafdghgfq
       61 vhvgpnkpes rgtvevvssn pndkpkiefn yisteqdkqd wrdcirltre ilnqpamdef
      121 rgdeiqpgln ittdeqidew vkqnvesayh pscsckmgsd edplavldeq cqvrgiqglr
      181 vvdssifpti pngnlnapti mvaeraadmi lgnalekssn tpvwiapnwq emqrmhppkr
      241 dlesis
//
LOCUS       WP_257974570             114 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974570
VERSION     WP_257974570.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 114)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..114
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <3..86
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mpepdgasey npernfivnd gesmaelcae glgltqiphf iardwlkagr lvpifpsmrq
       61 agngvyllya nreyvparvr vfidfitqai qdmdetpfht waetlpiyqp nqgd
//
LOCUS       WP_257974584             260 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974584
VERSION     WP_257974584.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>260
                     /product="DUF6531 domain-containing protein"
     Region          152..215
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
ORIGIN      
        1 mipqfviplt nclgqsyhfs sqpipkgehk kfdseqsaka flddfvplss srveelyhll
       61 gqfppnvpde eltpelyapv fakalvngsl yvasfpktkk natisseptp vpkqvnaksk
      121 qnkahtsskt qaknsasakp lqtgsechek agdpvslvtg eeiltlndve lpngfvwsrt
      181 yrsskasrnq glgygwrhaf qfelkevtde khnvtswefi sdsadeiefe pvehgstsyq
      241 vyvgaschfl npntrivtls
//
LOCUS       WP_257974602             447 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974602
VERSION     WP_257974602.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>447
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          248..338
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          340..430
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq prpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnakndvit teedtavtid vlvndsdveg dvlsiqsasv pseqgsvdiv
      301 dgklvftpae nfngeatity ivtdgdltde anvtvtvtpv ndspvavddt vstqedtvvt
      361 idvlpndsdv dgdklsiqsa svpkeqgtve vvdgklvftp tenfngdaei tytvtdgelt
      421 deakvtvtvn pvndaptikv davesit
//
LOCUS       WP_257974590             364 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF294 nucleotidyltransferase-like domain-containing
            protein, partial [Vibrio].
ACCESSION   WP_257974590
VERSION     WP_257974590.1
KEYWORDS    RefSeq.
SOURCE      Vibrio
  ORGANISM  Vibrio
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015410.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03445.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Vibrio"
                     /db_xref="taxon:662"
     Protein         <1..364
                     /product="DUF294 nucleotidyltransferase-like
                     domain-containing protein"
                     /GO_function="GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA]"
     Region          43..178
                     /region_name="DUF294"
                     /note="Putative nucleotidyltransferase DUF294; pfam03445"
                     /db_xref="CDD:460919"
     Region          218..360
                     /region_name="DUF294_C"
                     /note="Putative nucleotidyltransferase substrate binding
                     domain; pfam10335"
                     /db_xref="CDD:463050"
ORIGIN      
        1 hgkqvkgllt tthlvhnhrt qslfliekik yasslnalaa lkeerqtifq alvesgvsae
       61 iqgrvmsmim daftrriiql neellgpppc dyawlvagsh arnevhmlsd qdsaivlsdd
      121 ateehklyft hlamrvcngl aacgyplcdg kymaaspkwc qpirrwkeyy qkwvaspeyn
      181 kllsisvfle vraihgnref vdqiqqhlhd ciqkspsfip alvrdaidtq pplgifnnlv
      241 lekggensnt lnikkyalnl iidlarifsl aaggsltgte erfryaaqhg tlskdsveni
      301 igayrfitqv rfrhqlnail agttpdnhia pddfssferk hlkdafkiis elqdvaklkf
      361 vkga
//
LOCUS       WP_257974643              51 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3693 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974643
VERSION     WP_257974643.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023888.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12472.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..51
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>51
                     /product="DUF3693 domain-containing protein"
     Region          <1..46
                     /region_name="DUF3693"
                     /note="Phage related protein; cl22943"
                     /db_xref="CDD:451460"
ORIGIN      
        1 makkfdrlgl ssisitcael tlviaspqep lyqcalcdvm lndvsyqlhi h
//
LOCUS       WP_257974457              97 aa            linear   BCT 02-MAR-2025
DEFINITION  MltR family transcriptional regulator, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974457
VERSION     WP_257974457.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 97)
  AUTHORS   Figge,R.M., Ramseier,T.M. and Saier,M.H. Jr.
  TITLE     The mannitol repressor (MtlR) of Escherichia coli
  JOURNAL   J Bacteriol 176 (3), 840-847 (1994)
   PUBMED   8300537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016926.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05068.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>97
                     /product="MltR family transcriptional regulator"
     Region          1..>96
                     /region_name="MtlR"
                     /note="Mannitol repressor; cl11450"
                     /db_xref="CDD:472184"
ORIGIN      
        1 msredellek ldecenataf lqvsnkiinl klkallpsvf vqddlvkeya vdpllredgp
       61 lvttdvvskl mfamgkislq tyadiglydq vleyvvt
//
LOCUS       WP_257974711             343 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974711
VERSION     WP_257974711.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>343
                     /product="ABC transporter substrate-binding protein"
     Region          <1..304
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 yyknrynvek vritvirdpd iamkhfekgn ldyfemvlps fwhdktntdv ykkgyiqkyw
       61 gfnqspqgag gvwmntampl ldnlevrkgi maatdfdgmi enimrgdysr kphglgfghg
      121 eyddpnntpp kfdvdaavkh fekagfdtlg sdgirvndkg qrlsfaityg ynswtpriay
      181 lkeqaklagl eftlnlvdgs safkyilekk hqlaflnmgs geipayweyl hsdnankpqt
      241 nahtnysspe ldklieayda efdqnkryel shqiqeyvke aniivpgymv pysrvahwrw
      301 vkipkdgmtk atewvlhpmd ignfwidesv kketekamks gks
//
LOCUS       WP_257974719             525 aa            linear   BCT 02-MAR-2025
DEFINITION  S41 family peptidase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257974719
VERSION     WP_257974719.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015531.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03572.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..525
                     /product="S41 family peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          79..403
                     /region_name="CtpA"
                     /note="C-terminal processing protease CtpA/Prc, contains a
                     PDZ domain [Posttranslational modification, protein
                     turnover, chaperones]; COG0793"
                     /db_xref="CDD:440556"
     Region          <250..473
                     /region_name="Peptidase_S41_CPP_like"
                     /note="C-terminal processing peptidase-like; serine
                     protease family S41; cd07561"
                     /db_xref="CDD:143477"
     Site            order(377,403)
                     /site_type="active"
                     /note="Catalytic dyad [active]"
                     /db_xref="CDD:143477"
ORIGIN      
        1 qysiatavtl allqgcgggg dgaspsints tnsawtqgdy sktsnefanr cetprtgldp
       61 yagyqpypdk agsalqeklf lraftnetyl wydevpdrnp sfyssviayf hslvtsetta
      121 tgktkdrfhf aipyedemks sqsglvagfg fnwsfiqate prdvrisyte dnspaalngi
      181 irgdklikig sidvvntsnn aeintinttl fspeinkeys ftfetvdgyr ksvilkaedv
      241 atspvrnakv iehngkkvgy lqynsfepsa qtplinafnk laeaqvdeiv idlryngggl
      301 vlqssqvgym lsgadknrvf selihndkim ktipngdnvy pftnvaidwa agkfsdqmlp
      361 tlgkqqvyvl tsggtassse llmnalrgid vnviqigstt mgkpygfape qncgtmyyti
      421 qfksanekqf gdfadgfvpt pksqissslg ldnrvegcwv dddltkplgd tsegmlsaal
      481 nymdtgtcpq vspasfntmp lnsdspalkd hrsplrteai hvein
//
LOCUS       WP_257974749             129 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6279 family lipoprotein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257974749
VERSION     WP_257974749.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039714.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19795.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>129
                     /product="DUF6279 family lipoprotein"
     Region          <5..127
                     /region_name="DUF6279"
                     /note="Family of unknown function (DUF6279); pfam19795"
                     /db_xref="CDD:437627"
ORIGIN      
        1 srsapdlfsl slqltpkqqq eflqnvrkdy qernakyadk teaeireiil enteewmeew
       61 igelnsdqkr yakqisqqti lnsplwrnyr asiyqeleyl fenqsnsvvy qqvfmqllfe
      121 pesyyseql
//
LOCUS       WP_257974751             114 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF294 nucleotidyltransferase-like domain-containing protein,
            partial [Vibrio parahaemolyticus].
ACCESSION   WP_257974751
VERSION     WP_257974751.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015410.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03445.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>114
                     /product="DUF294 nucleotidyltransferase-like
                     domain-containing protein"
                     /GO_function="GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA]"
     Region          1..114
                     /region_name="DUF294"
                     /note="Putative nucleotidyltransferase DUF294; pfam03445"
                     /db_xref="CDD:460919"
ORIGIN      
        1 vfeamieshl panvigqvlm miydaftcrl iklaernvgl ppcnyawlaa gshargevhl
       61 gsdqdnalvl ddsatesdri yfrhfamyic kglaecgypl cngrfmaatp kwnq
//
LOCUS       WP_257974798              77 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974798
VERSION     WP_257974798.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 77)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>77
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          17..>77
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 lqelnyrars lsdcisgkfk itmpnsiass ifgsilrklq erypavifei sssnkvenll
       61 esnvdmairl ndvvddn
//
LOCUS       WP_257974822             146 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Leuconostoc pseudomesenteroides].
ACCESSION   WP_257974822
VERSION     WP_257974822.1
KEYWORDS    RefSeq.
SOURCE      Leuconostoc pseudomesenteroides
  ORGANISM  Leuconostoc pseudomesenteroides
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Leuconostoc.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02371.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Leuconostoc pseudomesenteroides"
                     /db_xref="taxon:33968"
     Protein         1..146
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=16447
     Region          <1..145
                     /region_name="COG3547"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442768"
ORIGIN      
        1 mvdqtkdlpe ydiyksipgf sdktvvslia elgdlhrfat snklnafvgi dlrfndsgdy
       61 kssgfitkrs ntiarkvlfk aisniastat yghqnhindw yqkkkqssms kgtrkiaiga
      121 msrllrtmhy lvlnnqlydy dtaskr
//
LOCUS       WP_257974825             350 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Leuconostoc
            pseudomesenteroides].
ACCESSION   WP_257974825
VERSION     WP_257974825.1
KEYWORDS    RefSeq.
SOURCE      Leuconostoc pseudomesenteroides
  ORGANISM  Leuconostoc pseudomesenteroides
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Leuconostoc.
REFERENCE   1  (residues 1 to 350)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 350)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 350)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 350)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Leuconostoc pseudomesenteroides"
                     /db_xref="taxon:33968"
     Protein         1..350
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=38342
     Region          49..>347
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mililrredk rmkmkksvli vaiasvsavt iaysavinah asnnkkvvki sywyvnaqtq
       61 ggasvdtlvk dfnkthkyik vtakynpnmy qglmqnlqsa qasgkvpdiv qvgwaytnyf
      121 adnfkyltpt saqkkfdakk tfinttfskh tlsfakdskg nlvglpysls tpilyynktm
      181 lnkygvdpks lttwegvsaa akkiksasgn yglyiqepgd twaqqslils nggkvekngk
      241 asfaskagik ayqfyqdmvn kdktalhtpw aqgvddfvng kvaiayttva qashikqsvn
      301 fdvaatvaph feghksvvpv ggsmlaitaq ssvqqkaawt fekymvdckn
//
LOCUS       WP_257974830             290 aa            linear   BCT 02-MAR-2025
DEFINITION  GHKL domain-containing protein [Leuconostoc pseudomesenteroides].
ACCESSION   WP_257974830
VERSION     WP_257974830.1
KEYWORDS    RefSeq.
SOURCE      Leuconostoc pseudomesenteroides
  ORGANISM  Leuconostoc pseudomesenteroides
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Leuconostoc.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025854.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14501.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Leuconostoc pseudomesenteroides"
                     /db_xref="taxon:33968"
     Protein         1..290
                     /product="GHKL domain-containing protein"
                     /calculated_mol_wt=32668
     Region          <59..259
                     /region_name="CitA"
                     /note="Sensor histidine kinase DipB regulating
                     citrate/malate metabolism [Signal transduction
                     mechanisms]; COG3290"
                     /db_xref="CDD:442519"
ORIGIN      
        1 mnrgivlmvq aliallcqpn fspcyvidil lilmqlills seakfllvfl lvflinclvi
       61 affrhrhlls qkqheiaith dytqslekan edfryfkhdy qnvlaslafa iqngnlqevs
      121 cayetlvsss lttlpnqksf nihligdsnl rslllvkhrm asdtgvsfsi dlltrcetqi
      181 slslyrsiai lldnaieaae etqnklvrlt lqtlnnehii qiinsidqpf stnhltrsgf
      241 sskkghsgig ltfvkhyvnh qpdvslrttv nhdtftqtlt fgatneflhp
//
LOCUS       WP_257974858             468 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974858
VERSION     WP_257974858.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>468
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          248..338
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          340..430
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq plpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedivvsgs
      241 anldilpind apnaendvit teedtavtid vlvndsdveg dalsiqsasv pkeqgtvevv
      301 dgklvftpae nfngeatisy ivtdgdltde akvsvtvtpv ndspvavddt tsiqedtavt
      361 idvltndtdv dgdklsiesa svpkeqgtve vvdgklvftp aenfngdaei tytvtdgelt
      421 deakvtvtvn pvndvptikv eavesiteda vstdtvlatl tvrdtdtp
//
LOCUS       WP_257974863             144 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Leuconostoc pseudomesenteroides].
ACCESSION   WP_257974863
VERSION     WP_257974863.1
KEYWORDS    RefSeq.
SOURCE      Leuconostoc pseudomesenteroides
  ORGANISM  Leuconostoc pseudomesenteroides
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Leuconostoc.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00528.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Leuconostoc pseudomesenteroides"
                     /db_xref="taxon:33968"
     Protein         1..144
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=15877
     Region          <3..144
                     /region_name="UgpE"
                     /note="ABC-type glycerol-3-phosphate transport system,
                     permease component [Carbohydrate transport and
                     metabolism]; COG0395"
                     /db_xref="CDD:440164"
ORIGIN      
        1 myhllntafg valpqladat gimlflnamd kipisltval kvdhipayki lkdivipiir
       61 psiisigaif finswneyvw ptlilkdkns ftlplalqny isseggtnfp lamalstiii
      121 ivplliymvf qryilnsisn sglk
//
LOCUS       WP_257974870             322 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974870
VERSION     WP_257974870.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 322)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 322)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..322
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          2..306
                     /region_name="XerD"
                     /note="Site-specific recombinase XerD [Replication,
                     recombination and repair]; COG4974"
                     /db_xref="CDD:443999"
ORIGIN      
        1 pmnewlehvm vrikneeels aeilrqvssd iarlneflgd kfsksinlet mndflntyyg
       61 dkskevynkk lsrlkkifsy ladesaigen fmlnkkpkrl nasdnkkerl dldieafkai
      121 ekeaplflkv amglsiqsth avaelhriky ripkpkpdtc givwfdtpkp engemvfgtl
      181 yihrakvkna ktsyvaipvt saikevvels ktdklhcpyv vhrrparnnn iakqcdhryq
      241 vtsrmisetf skvrdelgly snvekakrpt fheirrlsak lidemgvnpr qrmahasdrt
      301 tqiytdshdv ewhevpaisv ai
//
LOCUS       WP_257974881             325 aa            linear   BCT 02-MAR-2025
DEFINITION  replication initiation factor domain-containing protein, partial
            [Vibrio parahaemolyticus].
ACCESSION   WP_257974881
VERSION     WP_257974881.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 325)
  AUTHORS   Li,A.H., Silvestrini,B., Leone,M.G., Giacomelli,S. and Cheng,C.Y.
  TITLE     Cerebrin-50, a human cerebrospinal fluid protein whose mRNA is
            present in multiple tissues but predominantly expressed in the
            lymphoblastoid cells and the brain
  JOURNAL   Biochem Mol Biol Int 35 (1), 135-144 (1995)
   PUBMED   7735128
REFERENCE   2  (residues 1 to 325)
  AUTHORS   Balson,D.F. and Shaw,W.V.
  TITLE     Nucleotide sequence of the rep gene of staphylococcal plasmid pCW7
  JOURNAL   Plasmid 24 (1), 74-80 (1990)
   PUBMED   2270231
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014537.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02486.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>325
                     /product="replication initiation factor domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
     Region          1..325
                     /region_name="PHA00202"
                     /note="DNA replication initiation protein"
                     /db_xref="CDD:164786"
ORIGIN      
        1 mttatnilks fdeqsvhidy lcftfavkdl rhchdavrrl hkheeykgfa ksgllqrhcr
       61 apkfpappvf nptvaqtsde idaynkafdi cyrnyledcl riftnqvlgl slsaprglgf
      121 qfytesmklt spdgedfcgf vgiggnndtv hfqingtgck hvfarrptws lhdwltnvlg
      181 vqtlaridla yddydgifdc eyaykawrdd cfrtaergrg pvlhedmtia sigkdgkpiy
      241 tkeqysigsr tsriywriyn kaleqklant glvwyrseve lkkwnvdvll npagayaaln
      301 dfaasistak kfntkpvptk raald
//
LOCUS       WP_257974904              91 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257974904
VERSION     WP_257974904.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 91)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>91
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>91
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 kekfertkph vnvgtighvd hgkttltaai cttlakvygg eakdfasidn apeerergit
       61 iatshveydt psrhyahvdc pghadyvknm i
//
LOCUS       WP_257974933             163 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974933
VERSION     WP_257974933.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 163)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 163)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 163)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..163
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
     Region          <1..158
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
ORIGIN      
        1 llgeegegfk famlgldggr iniatcsvgt aqqalneakq ymterkqfgr slaqfqalqf
       61 kladmatelv aarqmvrlaa akldaqhaek svycamakrf atdvgfkvcd qalqihggyg
      121 yikeypverh frdvrvhqil egtneimrli isrrlltegv ell
//
LOCUS       WP_257974942             514 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3612 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974942
VERSION     WP_257974942.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023689.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12268.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..514
                     /product="DUF3612 domain-containing protein"
     Region          10..81
                     /region_name="HipB"
                     /note="Transcriptional regulator, contains XRE-family HTH
                     domain [Transcription]; COG1396"
                     /db_xref="CDD:441006"
     Region          40..>307
                     /region_name="COG3800"
                     /note="Predicted transcriptional regulator [General
                     function prediction only]"
                     /db_xref="CDD:443013"
     Region          323..498
                     /region_name="DUF3612"
                     /note="Protein of unknown function (DUF3612); pfam12268"
                     /db_xref="CDD:432439"
ORIGIN      
        1 kslirqshfl gtkirnlrkn nhltmedlsa rcvrinpeya psvsylsmie rgkrvpsidm
       61 leviaevfqk dpawflddep eleaitpnkg nrggingmal epsflfsndi lqiaipemls
      121 qtgitgrqfa hllirahqen hqnhfpdler aaeevglkrl nlsvedlidi aksmgldirw
      181 vdrapqdvvd elgvnakqli tsfmeppgti ylnkrmrdyp trlkydlsvy ighrvlhssd
      241 amnnvlsigh qnnweqmdsp vsnselnsqd ilqawrdfes sffagallcp kvpfrqlldr
      301 sgyeidvhkk agvspsvamr rmtvvspyph whyfdaygpg klkavyrgng iplpwgnmrk
      361 vndpcqhwav frrlsqpldt ssaqisilnv gdepriycce svnvfdpagn nrvlcagidl
      421 npaisaqggd avsiaeelks lcvasggssv ipphikkdlt tiakilninw iergiqsqar
      481 licsrgavcp rqpscyskcg eadetgdnvn iigl
//
LOCUS       WP_257974953             113 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6058 family natural product biosynthesis protein, partial
            [Vibrio parahaemolyticus].
ACCESSION   WP_257974953
VERSION     WP_257974953.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 113)
  AUTHORS   Qin,Z., Munnoch,J.T., Devine,R., Holmes,N.A., Seipke,R.F.,
            Wilkinson,K.A., Wilkinson,B. and Hutchings,M.I.
  TITLE     Formicamycins, antibacterial polyketides produced by Streptomyces
            formicae isolated from African Tetraponera plant-ants
  JOURNAL   Chem Sci 8 (4), 3218-3227 (2017)
   PUBMED   28507698
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039336.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19531.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..113
                     /product="DUF6058 family natural product biosynthesis
                     protein"
     Region          13..109
                     /region_name="DUF6058"
                     /note="Family of unknown function (DUF6058); pfam19531"
                     /db_xref="CDD:437363"
ORIGIN      
        1 sralsvlkgs kcevatpgln eiimedwehf lqgtyglctq tglpediaak gfaveqikal
       61 lerdvldsne ikrleyfvnl ldnasspfap herlnssrhr lvnevrrkyk lqs
//
LOCUS       WP_257974974             282 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF72 domain-containing protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257974974
VERSION     WP_257974974.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014017.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01904.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..282
                     /product="DUF72 domain-containing protein"
     Region          1..272
                     /region_name="DUF72"
                     /note="Protein of unknown function DUF72; cl00777"
                     /db_xref="CDD:469916"
ORIGIN      
        1 rlgltmwshn qwqqsfygsg tkpaerleky aqvfhtvegn ttfyatpthn tvqnwkaath
       61 ddfkftfklp kaitheqmlr gcneqlrdfm kimeplherv gqwtiqlpaa fgpeylerlk
      121 kfcasfppnf plgvevrhia ffskgeeera lnqwlvengi driimdsrpv faakpdneai
      181 idaqmkkpkv pvhaiatash pmirfighpe eqqnydffvp wlsklpqwia egkqpyvmih
      241 tadniiapel aaniyknlqk yvalpdlapf pandgnsqlq mf
//
LOCUS       WP_257974993             171 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974993
VERSION     WP_257974993.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 171)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>171
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          15..>148
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(31..32,34..35,38,42,44..50,119..124,130..131,
                     133..134)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176102"
ORIGIN      
        1 elnyrarsls dcisgkfkit mpnsiassif gsilrklqer ypavifeiss snkvenlles
       61 nvdiairlnd vvddnliahk vgnyndvlis nnsneksstl liyknhsnke eirknycdvi
      121 evdntsilln fveqgvglgv ipnyllkdss hqellkvtht fsteksmyva y
//
LOCUS       WP_257975032             352 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975032
VERSION     WP_257975032.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>352
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          248..338
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq plpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnaendvit teedtavtid vlvndsdveg dalsiqsasv pkeqgtvevv
      301 dgklvftpae nfngeatisy ivtdgdltde akvsvtvtpv ndspvavddt ts
//
LOCUS       WP_257974977             239 aa            linear   BCT 02-MAR-2025
DEFINITION  phage integrase central domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257974977
VERSION     WP_257974977.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 239)
  AUTHORS   Laxmikanthan,G., Xu,C., Brilot,A.F., Warren,D., Steele,L., Seah,N.,
            Tong,W., Grigorieff,N., Landy,A. and Van Duyne,G.D.
  TITLE     Structure of a Holliday junction complex reveals mechanisms
            governing a highly regulated DNA transaction
  JOURNAL   Elife 5, e14313 (2016)
   PUBMED   27223329
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 239)
  AUTHORS   Kamadurai,H.B., Jain,R. and Foster,M.P.
  TITLE     Crystallization and structure determination of the core-binding
            domain of bacteriophage lambda integrase
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 64 (Pt 6), 470-473
            (2008)
   PUBMED   18540053
REFERENCE   3  (residues 1 to 239)
  AUTHORS   Biswas,T., Aihara,H., Radman-Livaja,M., Filman,D., Landy,A. and
            Ellenberger,T.
  TITLE     A structural basis for allosteric control of DNA recombination by
            lambda integrase
  JOURNAL   Nature 435 (7045), 1059-1066 (2005)
   PUBMED   15973401
REFERENCE   4  (residues 1 to 239)
  AUTHORS   Aihara,H., Kwon,H.J., Nunes-Duby,S.E., Landy,A. and Ellenberger,T.
  TITLE     A conformational switch controls the DNA cleavage activity of
            lambda integrase
  JOURNAL   Mol Cell 12 (1), 187-198 (2003)
   PUBMED   12887904
  REMARK    Erratum:[Mol Cell. 2003 Sep;12(3):793]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047080.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22022.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>239
                     /product="phage integrase central domain-containing
                     protein"
     Region          1..>227
                     /region_name="PRK09692"
                     /note="integrase; Provisional"
                     /db_xref="CDD:170049"
ORIGIN      
        1 mtdvtiknld vrnkeytftv eenlqlrvrp krsikgsgtk awqfkyrhpv tkkitkismg
       61 typslglata kmeaaeyrkq latgidpkqa keesrienlr ahndsflais iewfekkskt
      121 vsefhakriw rslekyvfeh igslpvknit rriavdilrp lekagklsti kricqslnqi
      181 meyavandsi tanpltkmin aferhkvehm ptirpellne llsrlsnndk iqnktklll
//
LOCUS       WP_257975039             180 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6279 family lipoprotein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257975039
VERSION     WP_257975039.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039714.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19795.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>180
                     /product="DUF6279 family lipoprotein"
     Region          46..>180
                     /region_name="DUF6279"
                     /note="Family of unknown function (DUF6279); pfam19795"
                     /db_xref="CDD:437627"
ORIGIN      
        1 miklsslsnk vlqygfvfll villagctkk flysnidwfv ieylddyvsl ndeqetllee
       61 rlllladwhk keelplyidh lkelenidan nitlaflqqn rekmkahydr ivsrsapdlf
      121 slslqltpkq qqeflqnvrk dyqernakya dkteaeirei ilenteewme ewigelnsdq
//
LOCUS       WP_257975048             233 aa            linear   BCT 02-MAR-2025
DEFINITION  VPA1269 family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257975048
VERSION     WP_257975048.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 233)
  AUTHORS   Hurley,C.C., Quirke,A., Reen,F.J. and Boyd,E.F.
  TITLE     Four genomic islands that mark post-1995 pandemic Vibrio
            parahaemolyticus isolates
  JOURNAL   BMC Genomics 7, 104 (2006)
   PUBMED   16672049
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024410.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13009.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>233
                     /product="VPA1269 family protein"
     Region          <1..52
                     /region_name="Integrase_2"
                     /note="Putative integrase; pfam13009"
                     /db_xref="CDD:432936"
     Region          <142..189
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(152,155,179,188)
                     /site_type="active"
                     /db_xref="CDD:271175"
ORIGIN      
        1 myintnktad rsvafsevsg ytipwhheda ltvyarqldf lnkyhnvesp aamkdlerpq
       61 tilggkptaa vleitpsrfy lfrcnlnsde ksrdfpptkl litkmwnqlm veiqrrldae
      121 gadfsvisqe klekfknnvg ggnsyisylt phctrvtgit rleefgvpih iiskliagha
      181 nvrttyryvk ydksyindri teaqaqissk melalteelk tsdierarqi ayi
//
LOCUS       WP_257975052              35 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3693 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975052
VERSION     WP_257975052.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023888.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12472.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..35
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>35
                     /product="DUF3693 domain-containing protein"
     Region          <1..>35
                     /region_name="DUF3693"
                     /note="Phage related protein; cl22943"
                     /db_xref="CDD:451460"
ORIGIN      
        1 makkfdrlgl ssisitcael alviaspqep lyqca
//
LOCUS       WP_257975056              81 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2057 family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257975056
VERSION     WP_257975056.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021358.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09829.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>81
                     /product="DUF2057 family protein"
     Region          2..>81
                     /region_name="DUF2057"
                     /note="Uncharacterized protein conserved in bacteria
                     (DUF2057); cl11437"
                     /db_xref="CDD:448256"
ORIGIN      
        1 malsifacsn lyaattlvvp edvkllavnm ekpkleggif sdektieipd gtnqivfkyq
       61 pefeigddik svysdviiak f
//
LOCUS       WP_257975057              35 aa            linear   BCT 02-MAR-2025
DEFINITION  HAD hydrolase-like protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257975057
VERSION     WP_257975057.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024811.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13419.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..35
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>35
                     /product="HAD hydrolase-like protein"
     Region          2..>30
                     /region_name="YcjU"
                     /note="Beta-phosphoglucomutase, HAD superfamily
                     [Carbohydrate transport and metabolism]; COG0637"
                     /db_xref="CDD:440402"
ORIGIN      
        1 mkyqaaifdm dgllldterv cmrifqeace vqnlp
//
LOCUS       WP_257975066              74 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase family protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975066
VERSION     WP_257975066.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04851.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>74
                     /product="DEAD/DEAH box helicase family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
     Region          <2..>74
                     /region_name="COG0610"
                     /note="Type I site-specific restriction-modification
                     system, R (restriction) subunit and related helicases ...
                     [Defense mechanisms]"
                     /db_xref="CDD:440375"
ORIGIN      
        1 mqstentyvl idklkstkps nclivtsiqk msnihdegql ktadidlinq krivfivdea
       61 hrstfgdmlt tika
//
LOCUS       WP_257975090             550 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975090
VERSION     WP_257975090.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>550
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          <202..540
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq plpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellss
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnaendvit teedtavtid vlvndsdveg dalsiqsasv pseqgsvdiv
      301 dgklvftpae nfsgeatity ivtdgdltde akvtvtvtpv ndspvavddt tsiqedtevt
      361 idvltndtdv dgdklsiesa svpkeqgtve vvdgklvftp aenfngdaei iytvtdgqlt
      421 deakvtvtvn pvndaptikv davesiteda vstdtvvatl tvrdtdtped qltvslenns
      481 ngyfvlvgne vkltqagvda vnneelnlkd ltisasvsds vnptasdsds livnrvndap
      541 tvenaiadqv
//
LOCUS       WP_257975101              74 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975101
VERSION     WP_257975101.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 74)
  AUTHORS   Aravind,L., Leipe,D.D. and Koonin,E.V.
  TITLE     Toprim--a conserved catalytic domain in type IA and II
            topoisomerases, DnaG-type primases, OLD family nucleases and RecR
            proteins
  JOURNAL   Nucleic Acids Res 26 (18), 4205-4213 (1998)
   PUBMED   9722641
REFERENCE   2  (residues 1 to 74)
  AUTHORS   Szafranski,P., Smith,C.L. and Cantor,C.R.
  TITLE     Cloning and analysis of the dnaG gene encoding Pseudomonas putida
            DNA primase
  JOURNAL   Biochim Biophys Acta 1352 (3), 243-248 (1997)
   PUBMED   9224947
REFERENCE   3  (residues 1 to 74)
  AUTHORS   Bergerat,A., de Massy,B., Gadelle,D., Varoutas,P.C., Nicolas,A. and
            Forterre,P.
  TITLE     An atypical topoisomerase II from Archaea with implications for
            meiotic recombination
  JOURNAL   Nature 386 (6623), 414-417 (1997)
   PUBMED   9121560
REFERENCE   4  (residues 1 to 74)
  AUTHORS   Versalovic,J. and Lupski,J.R.
  TITLE     The Haemophilus influenzae dnaG sequence and conserved bacterial
            primase motifs
  JOURNAL   Gene 136 (1-2), 281-286 (1993)
   PUBMED   8294018
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013878.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01751.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>74
                     /product="toprim domain-containing protein"
     Region          <1..>74
                     /region_name="gyrB"
                     /note="DNA gyrase subunit B; Provisional; PRK14939"
                     /db_xref="CDD:237860"
ORIGIN      
        1 qailplkgki lnvekarfdk mlssqevatl italgcgigr deynpdklry hsiiimtdad
       61 vdgshirtll ltff
//
LOCUS       WP_257975185             497 aa            linear   BCT 02-MAR-2025
DEFINITION  RNase A-like domain-containing protein, partial [Enterococcus
            faecium].
ACCESSION   WP_257975185
VERSION     WP_257975185.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 497)
  AUTHORS   Batot,G., Michalska,K., Ekberg,G., Irimpan,E.M., Joachimiak,G.,
            Jedrzejczak,R., Babnigg,G., Hayes,C.S., Joachimiak,A. and
            Goulding,C.W.
  TITLE     The CDI toxin of Yersinia kristensenii is a novel bacterial member
            of the RNase A superfamily
  JOURNAL   Nucleic Acids Res 45 (9), 5013-5025 (2017)
   PUBMED   28398546
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037816.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18431.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..497
                     /product="RNase A-like domain-containing protein"
     Region          333..460
                     /region_name="CdiA-CT_Yk_RNaseA-like"
                     /note="C-terminal (CT) domain of the contact-dependent
                     growth inhibition (CDI) system protein CdiA (CdiA-CT) of
                     Yersinia kristensenii, and similar proteins; cl39768"
                     /db_xref="CDD:454353"
     Site            order(335,338..339,356..358,387,389,408,437,439,456..457,
                     459)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:411002"
     Site            order(339,350,457,459)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:411002"
ORIGIN      
        1 ttstynfsqg lqkryaqdvt shalmreylt gttdhgayrf sindhpafrk lisygslste
       61 tartgvigrd asvadrmfie dqffllemvr vmetrvgsdt tlltisghny ghrgshgsfv
      121 hevelsvpms vlmsqiatqe dfleyiqqnt tfefgvietp srevavqtaq qmaqayhtrt
      181 adiqknlaev laptenglsf dpsgiiatly gqtvvldatg kfvyadtrva vpeyqwgaid
      241 fayseaaipi ddsitidgrr gvldeetgdi vedgtgktlv egamgaawna lslarvleai
      301 knfkgddddd defewyspld lyydewyadg gkghtmerhv gqtadalqar leditysaaf
      361 htteqalifi ncaiytankk ylegtiklpl gdcslqdgnr viyrsyksia lgktlgwgfy
      421 ktpyekyvqy dsiyyakvvi qrmpnivwkk rkyyiltayp dlrrtvkeep praaplssiq
      481 yqysiknses lslfvih
//
LOCUS       WP_257975205             927 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6701 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975205
VERSION     WP_257975205.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042738.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20419.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..927
                     /product="DUF6701 domain-containing protein"
     Region          432..921
                     /region_name="DUF6701"
                     /note="Family of unknown function (DUF6701); pfam20419"
                     /db_xref="CDD:466568"
ORIGIN      
        1 givlegnnri gepnkrislr slsvelkvnn eqassiedyq nkhtviygdl lsayptklhn
       61 vlidgdielt gstlhidgky ntiigkilth sttdifntnv cgtieskghq lhlktnhpfq
      121 qhfvvgdiva hsslliddma vygtteskga saalngsfya kdtaikyfqt lnfnqgvgsq
      181 vcgeiqqtpg sshphsltgk ysqfcgvgqs rcdysssicp statpppecs mlppsnddlg
      241 ltvtpsddma lmcgddlpqf taittnndev vsapvmails dpdlftlevv kgkptstenq
      301 fqsndsgelv vrvipndidk ialdanyylt ftmvgdsake qtvnfmftpf mfeaysnerr
      361 tlneirviag kpenvhtrll acastgepvv asnyngkpkv vhplikplgg segdfsyste
      421 fkdglsehgl itnesglfev tlsdqfeckg fsecpddgtv evtgkfnvys rpwtlaicen
      481 qntlpsgtse qgdkfiaage hfsltvkpvi wqkggsisdp idssaycdal vttnfmhdga
      541 paasvvlsse qhspldtanq tstllksnya ltqghqsakn hrfvfnglyw aevgslkvka
      601 nlgstyfgmk vnegyrhigr fypkyfkvqs qdwtypknqg fvymnqpfek vtydvvalna
      661 nkedvknyah fapslqqhfy lgelggyqdr fvppapqkae wkrigdasig qfviekastn
      721 atchnspcwe kdktkghypd gpfnrgansk sskiglvtth vvdevnffdg seiltkqpdi
      781 rfgrlnfkdv ggnqgmkikv pldvevwqng rfvtnfddns ttangayyts tpiwsnapvn
      841 naqlsgvakm svgrtndiia sqidaareqi qfslnldhsg nqlpwlkydw etstpeeenp
      901 ptivtfgihr gndriiyrge pnmlgln
//
LOCUS       WP_257975217             210 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Vibrio parahaemolyticus].
ACCESSION   WP_257975217
VERSION     WP_257975217.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 210)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..210
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=23351
     Region          5..207
                     /region_name="PRK10403"
                     /note="nitrate/nitrite response regulator protein NarP"
                     /db_xref="CDD:182431"
ORIGIN      
        1 mtvckvmlvd dhplmrrgih qllsfepefe vvaeasngad avakahelel dlvlldlnmk
       61 gmsgldtlka lradgceari viltvsdspa dieaivrsga dgyllkdtep delvellkqa
      121 hqgdkaysqe vtkylsersd hedvfdsltd retqilreva rgfrnkqiad rlfisestvk
      181 vhmksllkkl qvpsrtaatv lylerfgdik
//
LOCUS       WP_257975237             123 aa            linear   BCT 02-MAR-2025
DEFINITION  cystatin domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975237
VERSION     WP_257975237.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012261.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00031.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..123
                     /product="cystatin domain-containing protein"
                     /GO_function="GO:0004869 - cysteine-type endopeptidase
                     inhibitor activity [Evidence IEA]"
     Site            order(41,78..80,82)
                     /site_type="active"
                     /note="putative proteinase inhibition site [active]"
                     /db_xref="CDD:238002"
     Region          47..>94
                     /region_name="CY"
                     /note="Cystatin-like domain; Cystatins are a family of
                     cysteine protease inhibitors that occur mainly as single
                     domain proteins. However some extracellular proteins such
                     as kininogen, His-rich glycoprotein and fetuin also
                     contain these domains; cl09238"
                     /db_xref="CDD:447698"
ORIGIN      
        1 ktvstcailg llvgcqpknq eetthvtasa dvcntqgnmp ggwnefdatp daqkamafvl
       61 kqmdtlssfk qiltvhaqiv sgvnyaiefe mddgsiwnti vyrnldgeya itqspkeghf
      121 ceq
//
LOCUS       WP_257975239              95 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar phosphate nucleotidyltransferase, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975239
VERSION     WP_257975239.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 95)
  AUTHORS   Jensen,S.O. and Reeves,P.R.
  TITLE     Domain organisation in phosphomannose isomerases (types I and II)
  JOURNAL   Biochim Biophys Acta 1382 (1), 5-7 (1998)
   PUBMED   9507048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012695.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00483.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>95
                     /product="sugar phosphate nucleotidyltransferase"
                     /GO_function="GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <1..>95
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
ORIGIN      
        1 fgielqyaiq pspdglaqaf iigeefigdd svclvlgdni fygqgfspkl qqaaaltega
       61 tvfgykvkdp erfgvvefdd emraisieek piepk
//
LOCUS       WP_257975308             492 aa            linear   BCT 02-MAR-2025
DEFINITION  type IV secretory system conjugative DNA transfer family protein
            [Vibrio parahaemolyticus].
ACCESSION   WP_257975308
VERSION     WP_257975308.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 492)
  AUTHORS   Lu,J., Wong,J.J., Edwards,R.A., Manchak,J., Frost,L.S. and
            Glover,J.N.
  TITLE     Structural basis of specific TraD-TraM recognition during F
            plasmid-mediated bacterial conjugation
  JOURNAL   Mol Microbiol 70 (1), 89-99 (2008)
   PUBMED   18717787
REFERENCE   2  (residues 1 to 492)
  AUTHORS   Gunton,J.E., Gilmour,M.W., Baptista,K.P., Lawley,T.D. and
            Taylor,D.E.
  TITLE     Interaction between the co-inherited TraG coupling protein and the
            TraJ membrane-associated protein of the H-plasmid conjugative DNA
            transfer system resembles chromosomal DNA translocases
  JOURNAL   Microbiology (Reading) 153 (Pt 2), 428-441 (2007)
   PUBMED   17259614
REFERENCE   3  (residues 1 to 492)
  AUTHORS   Schroder,G., Krause,S., Zechner,E.L., Traxler,B., Yeo,H.J.,
            Lurz,R., Waksman,G. and Lanka,E.
  TITLE     TraG-like proteins of DNA transfer systems and of the Helicobacter
            pylori type IV secretion system: inner membrane gate for exported
            substrates?
  JOURNAL   J Bacteriol 184 (10), 2767-2779 (2002)
   PUBMED   11976307
REFERENCE   4  (residues 1 to 492)
  AUTHORS   Dougherty,B.A., Hill,C., Weidman,J.F., Richardson,D.R., Venter,J.C.
            and Ross,R.P.
  TITLE     Sequence and analysis of the 60 kb conjugative,
            bacteriocin-producing plasmid pMRC01 from Lactococcus lactis
            DPC3147
  JOURNAL   Mol Microbiol 29 (4), 1029-1038 (1998)
   PUBMED   9767571
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014581.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02534.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..492
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=54634
     Region          <2..476
                     /region_name="PRK13880"
                     /note="conjugal transfer coupling protein TraG;
                     Provisional; cl46898"
                     /db_xref="CDD:481238"
ORIGIN      
        1 mtlhylrhng pehvlcyapt rsgkgvglvl ptllswqgsv ialdikgely aetagwrstq
       61 ggnitllfda areescgfnp leevrinppv dgkftiggqe vsdaqnialm lanpdgadkm
      121 dhfqqqaysl ivalilhnry kaahtgemas lvdlgatlkd pdtldiyamf skmmtfphmn
      181 khsdqeevaf tkeemdelme mdksdthpvv lqtaadmykk adrelasiis tasaafnlfl
      241 dpivakntrk sdfkidqlrn hdkplslyiv trpndidrlk pltrmlftlf lkratetldk
      301 pkqrllmmmd eftsigklqa ledsiayvgg ygikiylivq dteqlykayg keetltsnch
      361 iriayapnkv ptaemlskmt gtmtvaevst tisgknkenv sysvneksrp llttdecmrl
      421 paplkdengq ilkagkmlif aagfppiwgt qilwfidpvf krrhssaggd mvapkvasqv
      481 aridarttte at
//
LOCUS       WP_257975313             590 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975313
VERSION     WP_257975313.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 590)
  AUTHORS   Clarke,T.A., Edwards,M.J., Gates,A.J., Hall,A., White,G.F.,
            Bradley,J., Reardon,C.L., Shi,L., Beliaev,A.S., Marshall,M.J.,
            Wang,Z., Watmough,N.J., Fredrickson,J.K., Zachara,J.M., Butt,J.N.
            and Richardson,D.J.
  TITLE     Structure of a bacterial cell surface decaheme electron conduit
  JOURNAL   Proc Natl Acad Sci U S A 108 (23), 9384-9389 (2011)
   PUBMED   21606337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037016.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17963.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..590
                     /product="Ig-like domain-containing protein"
     Region          46..277
                     /region_name="Peptidase_M11"
                     /note="Gametolysin peptidase M11; cl21618"
                     /db_xref="CDD:354892"
     Region          327..>534
                     /region_name="COG1470"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:441079"
     Region          489..562
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
ORIGIN      
        1 alnkgiffll vlflflqniq yakaagssig qqdtlvmlln fkenpndqpi tseeahalvf
       61 gevndfyqen sygktwlsgq vagwytlpvs nqvcdypsvq aeadkmarad gvvledyqri
      121 iyimtqsgca gggsattgkt fpsrayidgt lsarviahef ghnlglshak aldcgdasvs
      181 sncsvieygd sydvmgtpdm gyintyyker mgwlndaesp niltatqdgl yeiaeyetqd
      241 itqnialkip rgvnpntglk ewfyveyrqa mgydqflddr symlfrgdvt dgvivrlvee
      301 gaeesyilhm kpnsdysqvy grkdwkdtal pvgdsftdpv sgltinlasa angfagvnvs
      361 fggsvtpsvc emsapsvsvk atsdtqvnag dtveyqltvt ntandvcgti rfdvsaqves
      421 gwqassqsis lasgessvat iavtsalsat sgdypvtfnv vntkdeaynv atqatyavae
      481 qqtgsgdvva vddnvqmskv stvsinvlgn diiadgvsve isamsapskg tvkllsdgsi
      541 qytpakrfkn qdsfsytits gnvtstamvt valqsspdsg gsspgkgknk
//
LOCUS       WP_257975336             176 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975336
VERSION     WP_257975336.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 176)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..176
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <1..156
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 vhfgihyfpl nlnknlvqrk vgkdmsvmvc rkdhpinnes isletiasyp laihlqkhwn
       61 erqdklsrll lshgidfkvk lktthinvii navettdllf pcsiyiaeql gekfsyitss
      121 devflplqek efgfiydkay kndpmivwlh stisklmndf ldvynkkfds ryeksr
//
LOCUS       WP_257975344             119 aa            linear   BCT 02-MAR-2025
DEFINITION  site-specific DNA-methyltransferase, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975344
VERSION     WP_257975344.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 119)
  AUTHORS   Su,P., Im,H., Hsieh,H., Kang'A,S. and Dunn,N.W.
  TITLE     LlaFI, a type III restriction and modification system in
            Lactococcus lactis
  JOURNAL   Appl Environ Microbiol 65 (2), 686-693 (1999)
   PUBMED   9925601
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023978.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12564.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>119
                     /product="site-specific DNA-methyltransferase"
     Region          48..92
                     /region_name="TypeIII_RM_meth"
                     /note="Type III restriction/modification enzyme
                     methylation subunit; pfam12564"
                     /db_xref="CDD:432638"
ORIGIN      
        1 mlpilnalti alqsderlvi dgklaknkiv elalnldpsl lklllsdeql kghffqdvdg
       61 mlifdkvafq rfvnnksflp dsftqfknki glsvdshyln esndvvlswp ykdcvlegg
//
LOCUS       WP_257975346              88 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257975346
VERSION     WP_257975346.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 88)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>88
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>88
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 gtighvdhgk ttltaaictt lakvyggeak dfasidnape erergitiat shveydtpsr
       61 hyahvdcpgh adyvknmitg aaqmdggi
//
LOCUS       WP_257975355             121 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6279 family lipoprotein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257975355
VERSION     WP_257975355.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039714.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19795.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>121
                     /product="DUF6279 family lipoprotein"
ORIGIN      
        1 miklsslsnk vlqygfvfll villagctkk flysnidwfv ieylddyvsl ndeqetllee
       61 rlllladwhk keelplyidh lkeleninan nitlaflqkn rekmkahydr ivsrsapdlf
      121 s
//
LOCUS       WP_257975372             246 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257975372
VERSION     WP_257975372.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..246
                     /product="helicase-related protein"
     Region          <1..246
                     /region_name="PRK10917"
                     /note="ATP-dependent DNA helicase RecG; Provisional"
                     /db_xref="CDD:236794"
ORIGIN      
        1 idelppgrtp iqtvaipdtk rddivervrn aclnegkqay wvctlidese vleaqaaadt
       61 aeelqrklpd vkiglvhgrm kpaekqavmq efkdnklhll vattvievgv dvpnsslmii
      121 enperlglaq lhqlrgrvgr gsvashcvll yhsplsktaq krlgvlresn dgfviaqkdl
      181 eirgpgellg tkqtgladfk iadlvrdqrl ipevqriarh ihdnyptnaa aiidrwlger
      241 diyska
//
LOCUS       WP_257975384             115 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257975384
VERSION     WP_257975384.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 115)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>115
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          <1..>114
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 dvtctgrcyr atqttlnkqg wevlfkgehq depnqnaldl asltkgtegt ctqvdmeqre
       61 tkppkyfdda sllkamtqaa kfikdpelrk tleakdkdta gengsigtea trsgh
//
LOCUS       WP_257975453             584 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257975453
VERSION     WP_257975453.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 584)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..584
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=63201
     Region          205..279
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); pfam02368"
                     /db_xref="CDD:396788"
     Region          289..372
                     /region_name="BID_2"
                     /note="Bacterial Ig-like domain 2; smart00635"
                     /db_xref="CDD:214752"
     Region          <474..>538
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mitalktgvs viradldefs semtvqvvda kltniyfdlp hkaiakglsf qakaygeytd
       61 kqtrdishlv ewdstdcsvv mpgtngifta qdegdadiya eldgltsthg sitvtpavlv
      121 smdisstale mplgthkplv vmgtlsdgeq vdltrgitwh vdndvveivd nvvkakhkgt
      181 alvtaaldgv qsepiqvqvt dailtnievt tnassvakgn stqlsaqgvy sdesrvelte
      241 qvawwvdnqd vlqlegarvk glavgqamvy atkdaitsap lqiqvtnavl ekihvppsei
      301 tleeknvqrf yaygeysdet tqdvthqvtw rssnkavldl iagglsnsaq lgsvtisasl
      361 gelkgtsevk vveaeekesa isicpqprsg egsveaclmv asdedgrlft appsvklmnk
      421 lgyelvkpls ydatkpktyv giktedgtrg pvgdfamfnq ygrdraglts qyanwchdls
      481 vrnfagrdnw rratrnelfs lyrasrgsvw ggtesiyeed kdgggfgwpa nseywstslm
      541 dlphhegvvy diinlhrgra qlvmdardpa yascvsdapg vplk
//
LOCUS       WP_257975455             320 aa            linear   BCT 02-MAR-2025
DEFINITION  M3 family metallopeptidase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257975455
VERSION     WP_257975455.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 320)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013591.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01432.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..320
                     /product="M3 family metallopeptidase"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          <1..318
                     /region_name="PRK10911"
                     /note="oligopeptidase A; Provisional"
                     /db_xref="CDD:182832"
ORIGIN      
        1 kvvsglfevl nrvfgmtvte regvdtwhes vrffdifdae gtlrgsfyld lyarehkrgg
       61 awmddcrgrr itlsgelqtp vayltcnfnr pvgdkpalft hdevvtlfhe fghgihhmlt
      121 qvetgavsgi ngvpwdavel psqflenwcw eedalafisg hyetgeplpk vmldkmlaak
      181 nfqsamgilr qlefglfdft lhteydpevg arvletlaev kekvavvpav ewarfshsfg
      241 hifaggysag yysylwaevl ssdafsrfee egifnketgq sflnnilemg gseepmelfk
      301 rfrgrepqid allrhsgiaa
//
LOCUS       WP_257975469             200 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975469
VERSION     WP_257975469.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>200
                     /product="DUF6531 domain-containing protein"
     Region          152..>200
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
ORIGIN      
        1 mipqfviplt nclgqsfhfs sqpipkgehk kfdseqsaka flddfvplss srveelyhll
       61 gqfppnvpde eltpelyapv fakalvngsl yvasfpktkk natissestp vpkqvnaksk
      121 qnkahtsskt qaknsasvkp lqtgsechek agdpvslvtg eeiltlndve lpngfvwsrt
      181 yrsskasrnq glgygwrhaf
//
LOCUS       WP_257975464             269 aa            linear   BCT 02-MAR-2025
DEFINITION  pyruvate kinase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257975464
VERSION     WP_257975464.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 269)
  AUTHORS   Yuan,M., McNae,I.W., Chen,Y., Blackburn,E.A., Wear,M.A.,
            Michels,P.A.M., Fothergill-Gilmore,L.A., Hupp,T. and
            Walkinshaw,M.D.
  TITLE     An allostatic mechanism for M2 pyruvate kinase as an amino-acid
            sensor
  JOURNAL   Biochem J 475 (10), 1821-1837 (2018)
   PUBMED   29748232
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 269)
  AUTHORS   Munoz,M.E. and Ponce,E.
  TITLE     Pyruvate kinase: current status of regulatory and functional
            properties
  JOURNAL   Comp Biochem Physiol B Biochem Mol Biol 135 (2), 197-218 (2003)
   PUBMED   12798932
REFERENCE   3  (residues 1 to 269)
  AUTHORS   Valentini,G., Chiarelli,L.R., Fortin,R., Dolzan,M., Galizzi,A.,
            Abraham,D.J., Wang,C., Bianchi,P., Zanella,A. and Mattevi,A.
  TITLE     Structure and function of human erythrocyte pyruvate kinase.
            Molecular basis of nonspherocytic hemolytic anemia
  JOURNAL   J Biol Chem 277 (26), 23807-23814 (2002)
   PUBMED   11960989
REFERENCE   4  (residues 1 to 269)
  AUTHORS   Larsen,T.M., Benning,M.M., Wesenberg,G.E., Rayment,I. and Reed,G.H.
  TITLE     Ligand-induced domain movement in pyruvate kinase: structure of the
            enzyme from rabbit muscle with Mg2+, K+, and L-phospholactate at
            2.7 A resolution
  JOURNAL   Arch Biochem Biophys 345 (2), 199-206 (1997)
   PUBMED   9308890
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012449.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00224.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..269
                     /product="pyruvate kinase"
                     /GO_function="GO:0000287 - magnesium ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0004743 - pyruvate kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0030955 - potassium ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006096 - glycolytic process [Evidence
                     IEA]"
     Region          <1..245
                     /region_name="PRK05826"
                     /note="pyruvate kinase; Provisional"
                     /db_xref="CDD:235619"
ORIGIN      
        1 raevvetkea mddvikasdi imvargdlgv eigdarlpmv qkslinrskh wgkpvitatq
       61 mlesmienpl ptraevldva naiidgtdav mlsaesaagk ypieaveamv riaqgaehel
      121 ecnhdcwdtl qhlcsnpgks falssmisas rvhqdlgvai ltqhgetpll msrcqsktki
      181 walsdnpall aqmtilrgve plyfkaaesh vdlapqlvec lrqkaneahi ssilmtqlds
      241 iegmgeinac rllslnvssh mkpaeeiaa
//
LOCUS       WP_257975497             207 aa            linear   BCT 02-MAR-2025
DEFINITION  glutamate--tRNA ligase family protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975497
VERSION     WP_257975497.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 207)
  AUTHORS   Rath,V.L., Silvian,L.F., Beijer,B., Sproat,B.S. and Steitz,T.A.
  TITLE     How glutaminyl-tRNA synthetase selects glutamine
  JOURNAL   Structure 6 (4), 439-449 (1998)
   PUBMED   9562563
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012951.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00749.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>207
                     /product="glutamate--tRNA ligase family protein"
                     /GO_function="GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
     Region          1..>207
                     /region_name="PRK05347"
                     /note="glutaminyl-tRNA synthetase; Provisional"
                     /db_xref="CDD:235424"
ORIGIN      
        1 mseadarpsn firqiidkdl adgkhtsvht rfppepngyl highaksicl nfgiaqdyqg
       61 qcnlrfddtn pekedieyve sikkdvnwlg fewdgevcys snyfdklyey aielinkgla
      121 yvdelspeqi reyrgtlkep gkpspyrdrs veenlalfek mragefeegk aclrakidmg
      181 ssfmvmrdpv lyrvrfathh qtgdkwc
//
LOCUS       WP_257975510             115 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975510
VERSION     WP_257975510.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>115
                     /product="ABC transporter substrate-binding protein"
     Region          12..>115
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 aelpadiewv snnneplfas eeavyggtyr tyiesfpqtl rsvgpdansg lrqylmdgtp
       61 kmaqrhpntg kwipqlaksw afgednktvy fklddtakws dgekitaddy vfmmq
//
LOCUS       WP_257975558              62 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975558
VERSION     WP_257975558.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 62)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..62
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>62
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <2..62
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 mqnqfkavla dehqdanpvq glllklivgq gnnltmvgde kqsiyafraa dvgqllnaqk
       61 ef
//
LOCUS       WP_257975564              97 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975564
VERSION     WP_257975564.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 97)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>97
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          3..>73
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 kfkitmpnsi assifgsilr klqerypavi feisssnkve nllesnvdia irlndvvddn
       61 liahkvgnyn dvlisnnsne ksstlliykn hsnkeei
//
LOCUS       WP_257975561             117 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975561
VERSION     WP_257975561.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 117)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>117
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          3..>116
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mdnvvlnett sdenalcell hnrkadlivg nvtnnqtsvl veeiyreplv vicrkdhpri
       61 gnrmdidtfy nekhcvlamn wdldkevess lnitlktsqi elitssyfgv lsnvshr
//
LOCUS       WP_257975574              74 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975574
VERSION     WP_257975574.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>74
                     /product="ABC transporter substrate-binding protein"
     Region          2..>74
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 tpvfrlaenf kmaddlmsvt fdirkgvkws dgqaftaddv vysfnlvkek peldqsgins
       61 wvtgvekvnd yqvk
//
LOCUS       WP_257975610             384 aa            linear   BCT 02-MAR-2025
DEFINITION  GHKL domain-containing protein [Leuconostoc citreum].
ACCESSION   WP_257975610
VERSION     WP_257975610.1
KEYWORDS    RefSeq.
SOURCE      Leuconostoc citreum
  ORGANISM  Leuconostoc citreum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Leuconostoc.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025854.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14501.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Leuconostoc citreum"
                     /db_xref="taxon:33964"
     Protein         1..384
                     /product="GHKL domain-containing protein"
                     /calculated_mol_wt=44704
     Region          <184..359
                     /region_name="CitA"
                     /note="Sensor histidine kinase DipB regulating
                     citrate/malate metabolism [Signal transduction
                     mechanisms]; COG3290"
                     /db_xref="CDD:442519"
ORIGIN      
        1 mvsngvgspf vratlastin ivllyyigcr erfwhdshlv illcavvstl mtyglmnpvt
       61 qlttlagwsv qyqvisnlcv nivttfviim lrcfrfkwvp geflqahmkq lmcllvisif
      121 lriwgnyqay hfarnhytms iwrelvwllm ivaivlvpml yryyeqlqnk veqhfealsa
      181 sqyyvnqlek qyaeyrffkh dyknilasle yaiqtenmhd iketyysvir rsqlllpket
      241 mlqlsqlsdi qlrgvilvky qlaaehsvni tlsvdklfdn tsiekdidfy rvvgilldna
      301 ieavslttdk kvsiifskdn eiiivnsyqe nidihrieel gysskntheg iglsfitryt
      361 mqqpliehct iienrqfiqk livg
//
LOCUS       WP_257975652              50 aa            linear   BCT 02-MAR-2025
DEFINITION  MaoC/PaaZ C-terminal domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975652
VERSION     WP_257975652.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 50)
  AUTHORS   Fukui,T., Shiomi,N. and Doi,Y.
  TITLE     Expression and characterization of (R)-specific enoyl coenzyme A
            hydratase involved in polyhydroxyalkanoate biosynthesis by
            Aeromonas caviae
  JOURNAL   J Bacteriol 180 (3), 667-673 (1998)
   PUBMED   9457873
REFERENCE   2  (residues 1 to 50)
  AUTHORS   Steinebach,V., Benen,J.A., Bader,R., Postma,P.W., De Vries,S. and
            Duine,J.A.
  TITLE     Cloning of the maoA gene that encodes aromatic amine oxidase of
            Escherichia coli W3350 and characterization of the overexpressed
            enzyme
  JOURNAL   Eur J Biochem 237 (3), 584-591 (1996)
   PUBMED   8647101
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013722.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01575.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..50
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>50
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
     Region          1..>47
                     /region_name="hot_dog"
                     /note="The hotdog fold was initially identified in the E.
                     coli FabA (beta-hydroxydecanoyl-acyl carrier protein
                     (ACP)-dehydratase) structure and subsequently in 4HBT
                     (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A
                     number of other seemingly unrelated...; cl00509"
                     /db_xref="CDD:469797"
ORIGIN      
        1 msasysqtit dadikqfagi sgdrnpvhld eeyasqsryg kriahgmnsa
//
LOCUS       WP_257975657             114 aa            linear   BCT 02-MAR-2025
DEFINITION  site-specific DNA-methyltransferase, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975657
VERSION     WP_257975657.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 114)
  AUTHORS   Su,P., Im,H., Hsieh,H., Kang'A,S. and Dunn,N.W.
  TITLE     LlaFI, a type III restriction and modification system in
            Lactococcus lactis
  JOURNAL   Appl Environ Microbiol 65 (2), 686-693 (1999)
   PUBMED   9925601
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023978.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12564.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>114
                     /product="site-specific DNA-methyltransferase"
     Region          48..92
                     /region_name="TypeIII_RM_meth"
                     /note="Type III restriction/modification enzyme
                     methylation subunit; pfam12564"
                     /db_xref="CDD:432638"
ORIGIN      
        1 mlpilnalti alqsderlvi dgklaknkiv elalnldpsl lklllsdeql kghffqdvdg
       61 mlifdkvafq rfvnnksflp dsftqfknki glsvdshyln esndvvlswp ykdc
//
LOCUS       WP_257975688             136 aa            linear   BCT 02-MAR-2025
DEFINITION  winged helix-turn-helix domain-containing protein [Vibrio
            fluvialis].
ACCESSION   WP_257975688
VERSION     WP_257975688.1
KEYWORDS    RefSeq.
SOURCE      Vibrio fluvialis
  ORGANISM  Vibrio fluvialis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 136)
  AUTHORS   Wietzorrek,A. and Bibb,M.
  TITLE     A novel family of proteins that regulates antibiotic production in
            streptomycetes appears to contain an OmpR-like DNA-binding fold
  JOURNAL   Mol Microbiol 25 (6), 1181-1184 (1997)
   PUBMED   9350875
REFERENCE   2  (residues 1 to 136)
  AUTHORS   Martinez-Hackert,E. and Stock,A.M.
  TITLE     The DNA-binding domain of OmpR: crystal structures of a winged
            helix transcription factor
  JOURNAL   Structure 5 (1), 109-124 (1997)
   PUBMED   9016718
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012698.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00486.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Vibrio fluvialis"
                     /db_xref="taxon:676"
     Protein         1..136
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=15560
     Region          <1..56
                     /region_name="CadC1"
                     /note="DNA-binding winged helix-turn-helix (wHTH) domain
                     [Transcription]; COG3710"
                     /db_xref="CDD:442924"
ORIGIN      
        1 mesvwnargv qvdeasvtqa isslrrslsd siktpkfikt eprvgykfig kvepvvnled
       61 qmirqplskr qetkeiksni tgheniysrr endvydstll cysmlvlivv vltslivfny
      121 ndsqwvllyl ynkivs
//
LOCUS       WP_257975719             188 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Vibrio fluvialis].
ACCESSION   WP_257975719
VERSION     WP_257975719.1
KEYWORDS    RefSeq.
SOURCE      Vibrio fluvialis
  ORGANISM  Vibrio fluvialis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 188)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Vibrio fluvialis"
                     /db_xref="taxon:676"
     Protein         1..188
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=20136
     Region          14..184
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(16..17,20..21,24,27..28,30..31,34,37..38,41,44..45,
                     48..49,52,55..56,58..59,63,65..66,69,72..73,76..77,80,83,
                     86..87,90,94,97,104,108,111,114..115,118,121..122,
                     125..126,128..129,132..133,146..147,150,153..154,157,
                     160..161,163..164,167..168,171,174..175,178,181..182,184)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            86..119
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 mkfaseitar ihhlqaiqqa skvaqrtsld tldiandgak tldlaadvan qidssveqas
       61 slmekltaqs qqiaqivtti stiadqtnll alnaaieaar ageygrgfav vadevrklaa
      121 ntshatdeig nivkrnselt qvseqtmtei qrkviecnqq lqstqalide irhgaqnvad
      181 tvsqlvnd
//
LOCUS       WP_257975727              80 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2913 family protein, partial [Vibrio fluvialis].
ACCESSION   WP_257975727
VERSION     WP_257975727.1
KEYWORDS    RefSeq.
SOURCE      Vibrio fluvialis
  ORGANISM  Vibrio fluvialis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022590.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11140.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Vibrio fluvialis"
                     /db_xref="taxon:676"
     Protein         <1..80
                     /product="DUF2913 family protein"
ORIGIN      
        1 evflegqeps pdilymleeq iqhgfndhkq qvaplsmllq sdkahrlesv vnehggfiae
       61 tkewnadtqq lhlllhplrg
//
LOCUS       WP_257975735             194 aa            linear   BCT 02-MAR-2025
DEFINITION  plasmid replication initiator TrfA, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975735
VERSION     WP_257975735.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 194)
  AUTHORS   Thorsted,P.B., Shah,D.S., Macartney,D., Kostelidou,K. and
            Thomas,C.M.
  TITLE     Conservation of the genetic switch between replication and transfer
            genes of IncP plasmids but divergence of the replication functions
            which are major host-range determinants
  JOURNAL   Plasmid 36 (2), 95-111 (1996)
   PUBMED   8954881
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018714.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07042.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     gene            1..>194
                     /gene="trfA"
     Protein         1..>194
                     /product="plasmid replication initiator TrfA"
     Region          95..>194
                     /region_name="RPA"
                     /note="Replication initiator protein A; cl19398"
                     /db_xref="CDD:473167"
ORIGIN      
        1 madnfkqqey iqklvdggvd pdtakeiasr tayhqsrsvk aglrpigesi tlpgipepea
       61 pappdttkan qytteannaa paakgeamsd kkpgrkkgat dalaskvdea rqaallkhtk
      121 qeikdaqlsl fdiapwgdhm ralpndyars alftvrnkrv prlalqsepi ysigddvnit
      181 ytgvelraed delv
//
LOCUS       WP_257975743             647 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase [Staphylococcus pseudintermedius].
ACCESSION   WP_257975743
VERSION     WP_257975743.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus intermedius
            group.
REFERENCE   1  (residues 1 to 647)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Staphylococcus pseudintermedius"
                     /db_xref="taxon:283734"
     Protein         1..647
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /calculated_mol_wt=74093
     Region          1..647
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 mkylilaekp sqassyakal gdfkkqkgyf kgqsnilkge ivitwcighl vqlaemaeyd
       61 eryskwqked lpfipeemky niskidsirs qfnniknlcd elndesvfvi atdpdregea
      121 iaryvinkip qvkkskvelk rlwantleve glreafkklr patetfpyyl eaqargiadw
      181 ivginltrlt tltmqskirn iglmsvgrvq tptlfmvynr nkeienfksq vfytlsykdk
      241 sktpecifkn kdkyfskeey esflsehnlk semkgtiksv eesekktkap klfklggiqk
      301 vankkwnysl setldivqal ydkgylsypr tdsnyitqse fdylkdhiet ysdlldlnfe
      361 akhleprkey vngnkvlehy aivptksvpa kedyqklsek ekniykevvt rtlcmfaedy
      421 iynqtvvnve vsnvlfatkg ketvdlgwkk yivdqdeksd ekdkeielsk yteneiidlt
      481 lkidegktkp payltegslg gegglmetca kelsdetykd dlkeasgigt patrasivkg
      541 lidkeyltfk kknlvvtekg kvlcealsdt klsspiltae wehelktise kgtieaqqhf
      601 ieniknyvie qvqeietsin skvkqadfsa seivgecpvc ksnvvkk
//
LOCUS       WP_257975745              71 aa            linear   BCT 02-MAR-2025
DEFINITION  PhoU domain-containing protein [Staphylococcus pseudintermedius].
ACCESSION   WP_257975745
VERSION     WP_257975745.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus intermedius
            group.
REFERENCE   1  (residues 1 to 71)
  AUTHORS   Liu,J., Lou,Y., Yokota,H., Adams,P.D., Kim,R. and Kim,S.H.
  TITLE     Crystal structure of a PhoU protein homologue: a new class of
            metalloprotein containing multinuclear iron clusters
  JOURNAL   J Biol Chem 280 (16), 15960-15966 (2005)
   PUBMED   15716271
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014010.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01895.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Staphylococcus pseudintermedius"
                     /db_xref="taxon:283734"
     Protein         1..71
                     /product="PhoU domain-containing protein"
                     /calculated_mol_wt=8301
     Region          6..>62
                     /region_name="phoU_full"
                     /note="phosphate transport system regulatory protein PhoU;
                     TIGR02135"
                     /db_xref="CDD:273990"
ORIGIN      
        1 mtvirkryed qlndllkdlr alglhtysml qksikvlsde eitharqivk sdrkinqmey
       61 dikssrriai n
//
LOCUS       WP_257975753             306 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2232 domain-containing protein [Staphylococcus
            pseudintermedius].
ACCESSION   WP_257975753
VERSION     WP_257975753.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus intermedius
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021506.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09991.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Staphylococcus pseudintermedius"
                     /db_xref="taxon:283734"
     Protein         1..306
                     /product="DUF2232 domain-containing protein"
                     /calculated_mol_wt=33998
     Region          21..305
                     /region_name="DUF2232"
                     /note="Predicted membrane protein (DUF2232); cl01728"
                     /db_xref="CDD:470315"
ORIGIN      
        1 maslfskinp katlisival lvvtlvihvm sglaiilacf slipgivlwy qskhsfglva
       61 liaiilstlt gnvfamtfli iilvlsmvis qlliqraske rilylttfva svltlsammi
      121 lqtlkkipya ddllqpyrai mhqaaelenl dqqaqeilnn siqqlaiqlp gmivvaiaiy
      181 vfitlliifp ilrkfkvatp vfrplffwqm krsvfimyal allttittqp attpnsigin
      241 fqivlgfllv iqglsfihff asikrmpgal kvilvivgvl fypmtrligl ldlglnlkrm
      301 ikndkr
//
LOCUS       WP_257975754             294 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975754
VERSION     WP_257975754.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 294)
  AUTHORS   Brunecky,R., Alahuhta,M., Bomble,Y.J., Xu,Q., Baker,J.O.,
            Ding,S.Y., Himmel,M.E. and Lunin,V.V.
  TITLE     Structure and function of the Clostridium thermocellum
            cellobiohydrolase A X1-module repeat: enhancement through
            stabilization of the CbhA complex
  JOURNAL   Acta Crystallogr D Biol Crystallogr 68 (Pt 3), 292-299 (2012)
   PUBMED   22349231
REFERENCE   2  (residues 1 to 294)
  AUTHORS   Le Nours,J., Anderson,L., Stoll,D., Stalbrand,H. and Lo Leggio,L.
  TITLE     The structure and characterization of a modular
            endo-beta-1,4-mannanase from Cellulomonas fimi
  JOURNAL   Biochemistry 44 (38), 12700-12708 (2005)
   PUBMED   16171384
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037015.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17957.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>294
                     /product="Ig-like domain-containing protein"
     Region          29..69
                     /region_name="ChiC_BD"
                     /note="Chitin-binding domain of chitinase C; cd12215"
                     /db_xref="CDD:213178"
     Region          88..146
                     /region_name="Big_7"
                     /note="Bacterial Ig domain; pfam17957"
                     /db_xref="CDD:436171"
     Region          182..247
                     /region_name="Big_7"
                     /note="Bacterial Ig domain; pfam17957"
                     /db_xref="CDD:436171"
ORIGIN      
        1 mkvtllhgav vaalsvsyqa qayncqslpd wdstaiytsg tqvktqgaay eaaywtqgnd
       61 pvtnsgswea wkalgqcdgg nsnlsptvsf ssptnnaqip egsaitllan asdedgqvtq
      121 veflagdqtv aivtqapfea swtaaqsvsq ltaiatdneg avtsttvaiv vqpqvelppp
      181 sitltsptgt etlsvgdnlt vtaqaddfdg vvtqveffvn nqsvaidtsa pyeyqwtasv
      241 gthsfkaqat ddsnlstmsq evalvvanse tgnggcadal pyvagtryev galv
//
LOCUS       WP_257975760             220 aa            linear   BCT 02-MAR-2025
DEFINITION  metallopeptidase TldD-related protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975760
VERSION     WP_257975760.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 220)
  AUTHORS   Ghilarov,D., Serebryakova,M., Stevenson,C.E.M., Hearnshaw,S.J.,
            Volkov,D.S., Maxwell,A., Lawson,D.M. and Severinov,K.
  TITLE     The Origins of Specificity in the Microcin-Processing Protease
            TldD/E
  JOURNAL   Structure 25 (10), 1549-1561 (2017)
   PUBMED   28943336
REFERENCE   2  (residues 1 to 220)
  AUTHORS   Hu,Y., Peng,N., Han,W., Mei,Y., Chen,Z., Feng,X., Liang,Y.X. and
            She,Q.
  TITLE     An archaeal protein evolutionarily conserved in prokaryotes is a
            zinc-dependent metalloprotease
  JOURNAL   Biosci Rep 32 (6), 609-618 (2012)
   PUBMED   22950735
REFERENCE   3  (residues 1 to 220)
  AUTHORS   Allali,N., Afif,H., Couturier,M. and Van Melderen,L.
  TITLE     The highly conserved TldD and TldE proteins of Escherichia coli are
            involved in microcin B17 processing and in CcdA degradation
  JOURNAL   J Bacteriol 184 (12), 3224-3231 (2002)
   PUBMED   12029038
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039907.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19289.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..220
                     /product="metallopeptidase TldD-related protein"
     Region          <1..220
                     /region_name="PmbA_TldD"
                     /note="PmbA/TldA metallopeptidase domain 1; cl19356"
                     /db_xref="CDD:450292"
ORIGIN      
        1 vsrldaqrlk tgqypimfaa dvatglighl vmaisggnly rkssflldhl gkqvlpewfn
       61 vserphvlrg lasspfdseg vytqdceiit dgvlatyllt syaarkmkmd ptghaggihn
      121 wyvkstgqnf eqmlkelgtg llvtevmgqg vnvvtgdysr gaagfwveng eiqypvseit
      181 iagnlkdmft kivavgsdie trsqiqtgsi lldtmkvage
//
LOCUS       WP_257975766              96 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975766
VERSION     WP_257975766.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 96)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..96
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <1..87
                     /region_name="PRK11139"
                     /note="DNA-binding transcriptional activator GcvA;
                     Provisional"
                     /db_xref="CDD:182990"
ORIGIN      
        1 ginvnhgpif shstmvlqaa ahgqgvalgn nvlakpemea grliapfdev lisknafyvv
       61 cheqqadmgr iatfrdwmla tarkeqeevl depvds
//
LOCUS       WP_257975772             143 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975772
VERSION     WP_257975772.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 143)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..143
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <1..142
                     /region_name="PRK11074"
                     /note="putative DNA-binding transcriptional regulator;
                     Provisional"
                     /db_xref="CDD:182948"
ORIGIN      
        1 fevkdmgvld wafvmspahp cvrqqvltee fvsqfpaicl ddtsnvlpkr htghyakqrr
       61 lllpnwysai eclkngvgvg ymprhiampl ihegvlvekl lqddkplsrc clvwrkdddh
      121 kliqwmvdyl gspnqlhqdw lqc
//
LOCUS       WP_257975774             144 aa            linear   BCT 02-MAR-2025
DEFINITION  MATE family efflux transporter, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257975774
VERSION     WP_257975774.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01554.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..144
                     /product="MATE family efflux transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <1..115
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 knpqrafsgl flsmrfavvf qgfiflmmvp lsiplaalfs qeetvknllw hyllvvpfsy
       61 gfqgivmmlv sglnamhkpl rafqwsfmrl fvftlpaawv gsqvysiegl figialgntl
      121 ggllgymfal rerkltlieq nsas
//
LOCUS       WP_257975785             394 aa            linear   BCT 02-MAR-2025
DEFINITION  M3 family metallopeptidase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257975785
VERSION     WP_257975785.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 394)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013591.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01432.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>394
                     /product="M3 family metallopeptidase"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          1..>394
                     /region_name="PRK10911"
                     /note="oligopeptidase A; Provisional"
                     /db_xref="CDD:182832"
ORIGIN      
        1 lyeayktika seefatltra qqktitdalr dfelsgiglp sdeqhrygei skrmselssk
       61 fsnnvldatm gwtkhitdek dlagmpesal aaakaaaeak eldgylitld ipsylpvmty
      121 cdnqelrkev yeayvtrasd rgpnagkwdn seiiteqlkl rheiarmlgf ntfsekslat
      181 kmaetpaqvl gflndlatra kpqgereiee lrqftksefg veelnvwdia yysekqkqhl
      241 fqisdeelrp yfpeskvvsg lfevlnrvfg mtvteregvd twhesvrffd ifdaegtlrg
      301 sfyldlyare hkrggawmdd crgrritlsg elqtpvaylt cnfnrpvgdk palfthdevv
      361 tlfhefghgi hhmltqvetg avsgingvpw dave
//
LOCUS       WP_257975791             192 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257975791
VERSION     WP_257975791.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 192)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 192)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 192)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 192)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>192
                     /product="ATP-binding protein"
     Region          <1..187
                     /region_name="envZ"
                     /note="osmolarity sensor protein; Provisional; PRK09467"
                     /db_xref="CDD:236531"
ORIGIN      
        1 pevsergsne lkaavrafnk mnrridshik dremlfsais hdlktpiacl klraemlddd
       61 adrerfirls ndldlmvkga lqciketdih eeiepinftq liqhissnia dapdtirihg
      121 eirthfagkp laikrciqnl vdnalkyghq aditlsespe siqieiedhg dgvddlllek
      181 lcqpyfrasn dk
//
LOCUS       WP_257975795             283 aa            linear   BCT 02-MAR-2025
DEFINITION  type II secretion system F family protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975795
VERSION     WP_257975795.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 283)
  AUTHORS   Peabody,C.R., Chung,Y.J., Yen,M.R., Vidal-Ingigliardi,D.,
            Pugsley,A.P. and Saier,M.H.
  TITLE     Type II protein secretion and its relationship to bacterial type IV
            pili and archaeal flagella
  JOURNAL   Microbiology (Reading) 149 (Pt 11), 3051-3072 (2003)
   PUBMED   14600218
REFERENCE   2  (residues 1 to 283)
  AUTHORS   Py,B., Loiseau,L. and Barras,F.
  TITLE     An inner membrane platform in the type II secretion machinery of
            Gram-negative bacteria
  JOURNAL   EMBO Rep 2 (3), 244-248 (2001)
   PUBMED   11266368
REFERENCE   3  (residues 1 to 283)
  AUTHORS   Stathopoulos,C., Hendrixson,D.R., Thanassi,D.G., Hultgren,S.J., St
            Geme,J.W. 3rd and Curtiss,R. 3rd.
  TITLE     Secretion of virulence determinants by the general secretory
            pathway in gram-negative pathogens: an evolving story
  JOURNAL   Microbes Infect 2 (9), 1061-1072 (2000)
   PUBMED   10967286
REFERENCE   4  (residues 1 to 283)
  AUTHORS   Salmond,G.P. and Reeves,P.J.
  TITLE     Membrane traffic wardens and protein secretion in gram-negative
            bacteria
  JOURNAL   Trends Biochem Sci 18 (1), 7-12 (1993)
   PUBMED   8438237
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11449670
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..283
                     /product="type II secretion system F family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
     Region          92..282
                     /region_name="TadC"
                     /note="Flp pilus assembly protein TadC [Extracellular
                     structures]; COG2064"
                     /db_xref="CDD:441667"
ORIGIN      
        1 liflalglii slsaayyslk vfdktkanis tkkiidstqe ktpfvdklsl hlsrlsfnke
       61 etknnlvrag ihsefiaqay yllkiiplvf clafigysyi qgemefssaf isfslsmlvc
      121 liapdmyiss rgnanvrhvs srlpflldlm nvcvhtgmtl easldylsne lktvdenlay
      181 vvkktserak ivgldralte fydlvpttea qsfvmtltqs lkygssvgav laslasdire
      241 inmleleeki gkmgakmsip miafimipiv vliaapgimr mlg
//
LOCUS       WP_257975805             335 aa            linear   BCT 02-MAR-2025
DEFINITION  PTS transporter subunit EIIC, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257975805
VERSION     WP_257975805.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 335)
  AUTHORS   Reizer,J., Paulsen,I.T., Reizer,A., Titgemeyer,F. and Saier,M.H.
            Jr.
  TITLE     Novel phosphotransferase system genes revealed by bacterial genome
            analysis: the complete complement of pts genes in mycoplasma
            genitalium
  JOURNAL   Microb Comp Genomics 1 (3), 151-164 (1996)
   PUBMED   9689210
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02378.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>335
                     /product="PTS transporter subunit EIIC"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
     Region          1..>335
                     /region_name="PTS-II-BC-glcB"
                     /note="PTS system, glucose-specific IIBC component;
                     TIGR02002"
                     /db_xref="CDD:273923"
ORIGIN      
        1 gqlqkigrsl mlpvavlpva glmlgignag fafipdavnk vmlaagegvf gnmqlmfavg
       61 valglskgnd gaaalaglvg liimnaslgi vtglrgletd atimgvetlq tgvfggifig
      121 avaaimynrf yniklpeylg ffagkrfvpi vtglsaivvg ailafawppv gqlldafshw
      181 aayqnpvlaw avygagersl lpvglhhiwn apfffevgsy vdpetgkeft geltrffagd
      241 ktagylsggf mysmwalpaa alaiyhcasp erkkivgglm msaaltswlt gitepieftf
      301 lfvapvlyvi hifltgiafa itafleikhs tdfah
//
LOCUS       WP_257975806              85 aa            linear   BCT 02-MAR-2025
DEFINITION  protein-disulfide reductase DsbD domain-containing protein, partial
            [Vibrio parahaemolyticus].
ACCESSION   WP_257975806
VERSION     WP_257975806.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 85)
  AUTHORS   Bushweller,J.H.
  TITLE     Protein Disulfide Exchange by the Intramembrane Enzymes DsbB, DsbD,
            and CcdA
  JOURNAL   J Mol Biol 432 (18), 5091-5103 (2020)
   PUBMED   32305461
REFERENCE   2  (residues 1 to 85)
  AUTHORS   Smith,R.P., Whitten,A.E., Paxman,J.J., Kahler,C.M., Scanlon,M.J.
            and Heras,B.
  TITLE     Production, biophysical characterization and initial
            crystallization studies of the N- and C-terminal domains of DsbD,
            an essential enzyme in Neisseria meningitidis
  JOURNAL   Acta Crystallogr F Struct Biol Commun 74 (Pt 1), 31-38 (2018)
   PUBMED   29372905
REFERENCE   3  (residues 1 to 85)
  AUTHORS   Goulding,C.W., Sawaya,M.R., Parseghian,A., Lim,V., Eisenberg,D. and
            Missiakas,D.
  TITLE     Thiol-disulfide exchange in an immunoglobulin-like fold: structure
            of the N-terminal domain of DsbD
  JOURNAL   Biochemistry 41 (22), 6920-6927 (2002)
   PUBMED   12033924
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022853.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11412.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>85
                     /product="protein-disulfide reductase DsbD
                     domain-containing protein"
     Region          1..>58
                     /region_name="dipZ"
                     /note="thiol:disulfide interchange protein precursor;
                     Provisional; PRK00293"
                     /db_xref="CDD:234717"
ORIGIN      
        1 vpldewqega rvivqyqgca kagfcyppet riipidafta siadsavatk ptqstannnq
       61 tnatsptast svssnntpap vteqd
//
LOCUS       WP_257975830             110 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF294 nucleotidyltransferase-like domain-containing protein,
            partial [Vibrio parahaemolyticus].
ACCESSION   WP_257975830
VERSION     WP_257975830.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015410.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03445.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>110
                     /product="DUF294 nucleotidyltransferase-like
                     domain-containing protein"
                     /GO_function="GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA]"
     Region          1..110
                     /region_name="DUF294"
                     /note="Putative nucleotidyltransferase DUF294; pfam03445"
                     /db_xref="CDD:460919"
ORIGIN      
        1 vsaeiqgrvm smimdaftrr iiqlneellg pppcdyawlv agsharnevh mlsdqdsaiv
       61 lsddateehk lyfthlamrv cnglaacgyp lcdgkymaas pkwcqpirrw
//
LOCUS       WP_257975873            1144 aa            linear   BCT 02-MAR-2025
DEFINITION  SdrD B-like domain-containing protein [Staphylococcus
            pseudintermedius].
ACCESSION   WP_257975873
VERSION     WP_257975873.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus intermedius
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028519.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17210.9
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Staphylococcus pseudintermedius"
                     /db_xref="taxon:283734"
     Protein         1..1144
                     /product="SdrD B-like domain-containing protein"
                     /calculated_mol_wt=124180
     Region          24..>531
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          536..641
                     /region_name="SdrD_B"
                     /note="SdrD B-like domain; pfam17210"
                     /db_xref="CDD:435789"
     Region          650..753
                     /region_name="SdrD_B"
                     /note="SdrD B-like domain; pfam17210"
                     /db_xref="CDD:435789"
     Region          761..864
                     /region_name="SdrD_B"
                     /note="SdrD B-like domain; pfam17210"
                     /db_xref="CDD:435789"
     Region          875..978
                     /region_name="SdrD_B"
                     /note="SdrD B-like domain; pfam17210"
                     /db_xref="CDD:435789"
     Region          996..1108
                     /region_name="Cornifin"
                     /note="Cornifin (SPRR) family; pfam02389"
                     /db_xref="CDD:280537"
ORIGIN      
        1 mstekqddtq akanalstdd stptteqsks dteptqnqev nekeatqveq tpdnassefk
       61 dsaaqdetts kdadiaqtke aknealqsds sanlsnqeae kenttnsesq vneqpkadtt
      121 sdsqvsntpq qdptstvpsp etsednrpst elknsettas qttlneqpte stsnqtettk
      181 aptnttvank kapaqlkdik gttqlravsa sqptavaagg tnvndkvtas nmkitesyie
      241 pnnsgnfylk snfnvngtvk egdyftvkmp dtvntfgdtr hspdfrekit nqkgevvalg
      301 eydvanhtmt ytftnvvnnl envsgsfnlt qfmdrkvatd sqtyplkydi agesldtqik
      361 vnygqyyseg dsnlksmits edpktgeydq yiyvnplqkt angtvvrvqg fqvdptksng
      421 qvkpdttqik ilkvadgqpl nssfgvndse yedvtkqfni vyrdnnladi yfgnlngqry
      481 ivkvtskenl dskedlnlra imatqnrygq ynyitwdndi vksssdgtad gneasyqlgd
      541 kvwndvnkng iqdqgetgia dvkvtlkdld gnildttytn tngkyifdnl kngnyqvgfe
      601 tpegyaasps nqgndaldsd gptnvqavis dgnnltidqg fyqtetpthn vgdkvwedln
      661 kdgiqdqnep gianvkvtlk dadgnvvdtr ttddkgnylf ekvkegeyti efetpegytp
      721 tqtgqgrvst dsngtsslil vegnddltid sgfykepvth kvgdkvwddl nkdgiqddne
      781 pgisdvkvtl kdadgnvvdt rttdangnyl fenvkegdyt iefetpegyt ptvtgqgtad
      841 ndsngtstkv tvkdgddlti dsgftqvtpe ppthnvgdkv wddlnkdgiq ddnepgisdv
      901 kvtlkdadgn vvdtrttdan gnylfenvke gdytiefetp egytptvtgq gtadndsngt
      961 stkvtvkdgd dltidsgftq vtpepptepe npspeqpsep gqpenpspeq psepgqpenp
     1021 speqpsepgq penpspeqps epgqpenpsp eqpsepgqpk npspeqpnnp svpgvqnpek
     1081 psltpvtqpv hsngnkakps qqqkalpetg eteshqgtlf ggilaalgal lfarkkrhdk
     1141 kqsh
//
LOCUS       WP_257975850              80 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase family 8, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257975850
VERSION     WP_257975850.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 80)
  AUTHORS   Alzari,P.M., Souchon,H. and Dominguez,R.
  TITLE     The crystal structure of endoglucanase CelA, a family 8 glycosyl
            hydrolase from Clostridium thermocellum
  JOURNAL   Structure 4 (3), 265-275 (1996)
   PUBMED   8805535
  REMARK    Erratum:[Structure 1996 May 15;4(5):633]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013438.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01270.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>80
                     /product="glycosyl hydrolase family 8"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <1..>80
                     /region_name="Glyco_hydro_8"
                     /note="Glycosyl hydrolases family 8; cl01351"
                     /db_xref="CDD:470168"
ORIGIN      
        1 hlvasrilre etvniagvgt vllpaptgfd adsqyrvnps yvplqliarm qslypqynwd
       61 smykasvhml ektmpagfsp
//
LOCUS       WP_257975886             594 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257975886
VERSION     WP_257975886.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 594)
  AUTHORS   Clarke,T.A., Edwards,M.J., Gates,A.J., Hall,A., White,G.F.,
            Bradley,J., Reardon,C.L., Shi,L., Beliaev,A.S., Marshall,M.J.,
            Wang,Z., Watmough,N.J., Fredrickson,J.K., Zachara,J.M., Butt,J.N.
            and Richardson,D.J.
  TITLE     Structure of a bacterial cell surface decaheme electron conduit
  JOURNAL   Proc Natl Acad Sci U S A 108 (23), 9384-9389 (2011)
   PUBMED   21606337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037016.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17963.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..594
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=63558
     Region          50..281
                     /region_name="Peptidase_M11"
                     /note="Gametolysin peptidase M11; cl21618"
                     /db_xref="CDD:354892"
     Region          331..>538
                     /region_name="COG1470"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:441079"
     Region          493..566
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
ORIGIN      
        1 mnehalnkgi ffllvlflfl qniqyakaag ssigqqdtlv mllnfkenpn dqpitseeay
       61 alvfgevndf yqensygktw lsgqvagwyt lpvsnqvcdy psvqaeadkm aradgvvled
      121 yqriiyimtq sgcagggsat tgktfpsray idgtlsarvi ahefghnlgl shakaldcgd
      181 asvsnncsvi eygdsydvmg tpdmgyinty ykermgwlnd aespniltat qdglyeiaey
      241 etrditqnia lkiprgvnpn tglkewfyve yrqamgydqf lddrsymlfr gdvtdgvivr
      301 lveegaeesy ilhmkpnsdy sqvygrkdwk dtalpvgdsf tdpvsgltin lasaangfag
      361 vnvsfggsvt psvcemsaps vsvkatsdtq vnagdtveyq ltvintandv cgtirfdvsa
      421 qvesgwqass qsislasges svatiavtsa lsatsgdypv tfnvvntkde aynvatqaty
      481 avaeqqtgsg dvvavddnvq mskvstvtin vlgndiiadg vsveisamsa pskgtvklls
      541 dgsiqytpak rfksqdsfsy titsgnvtst amvtvalqss pdsggsspgk gknk
//
LOCUS       WP_257975910             689 aa            linear   BCT 02-MAR-2025
DEFINITION  SLBB domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257975910
VERSION     WP_257975910.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 689)
  AUTHORS   Burroughs,A.M., Balaji,S., Iyer,L.M. and Aravind,L.
  TITLE     A novel superfamily containing the beta-grasp fold involved in
            binding diverse soluble ligands
  JOURNAL   Biol Direct 2, 4 (2007)
   PUBMED   17250770
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022007.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10531.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..689
                     /product="SLBB domain-containing protein"
                     /calculated_mol_wt=75329
     Region          13..173
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          200..249
                     /region_name="SLBB"
                     /note="SLBB domain; pfam10531"
                     /db_xref="CDD:463136"
     Region          <289..368
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          <382..461
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          <476..570
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          <578..665
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
ORIGIN      
        1 mmcelawvtp lhaaendtvk vgdlvqinlp geaslnqgfq vdrrgrinlp eigpvfvagy
       61 neqqlqdvii etlktvyrdv nnarvfikqq qllvsvqgyv vkpgeytlpa gsniqmfvye
      121 agglragaql dkmivkrgdq niefdykrfl dtgdnsqlpk lesldvlfvp asplvgnieq
      181 efdaaklans gdsadsarai kvfgevnapg sftykpnttl vdvvmraggv tryasveqir
      241 vitnntptmf nlktyldtgd qsllpeilpg atifvpkqee eikaganvvy imgevahpga
      301 yegkqgasfm dilanaggpt ryaesrqirv ikadgqvikf dltahtegls svappkvsag
      361 daifvpektd fnekswlkva psravavmge vvrpgriews demdlidlla hvggptrrad
      421 tskievanng qmtnfdldqy ildgspasnl prvsagtvvr vhalpddpsd nksqwvsqss
      481 dasiyvfgqi napgryrftd emhfldilsa adgptmdadi hnirvthrgl gyakvsklnl
      541 smyfetgdes ilpdvrpgdt iyipeknknw ldrskestvr vlgevrepgr yvfndnmtvl
      601 dllaeaggpt nsaylekisi vnmsccqgqa rtfdlvnfsk taniydlpvi ragdtiyiph
      661 kdesfaekar aglrdilqit ttivligal
//
LOCUS       WP_257975922             766 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Vibrio parahaemolyticus].
ACCESSION   WP_257975922
VERSION     WP_257975922.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 766)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 766)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019348.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07728.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..766
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=86936
     Region          <238..691
                     /region_name="McrB"
                     /note="5-methylcytosine-specific restriction endonuclease
                     McrBC, GTP-binding regulatory subunit McrB [Defense
                     mechanisms]; COG1401"
                     /db_xref="CDD:441011"
     Region          351..519
                     /region_name="COG4127"
                     /note="Predicted restriction endonuclease, Mrr-cat
                     superfamily [General function prediction only]"
                     /db_xref="CDD:443303"
ORIGIN      
        1 mmkeqldiis gldsssyllw lesndryyhh rkqlladanq lflsqrklse lsdgercvil
       61 grrtrmadda eydvnlfgsp ggsgyvngil ssgyvhldpf feaiprtgki ddetferlve
      121 lykqgisdsg stvqlfvfft rilavvrpdt fvsgadglvh kiskalgirn pgndykkywt
      181 dflprlheln lfsrlvgdpi nvnlalidgi gwqetdgndv ggkkgtkkiv letsnghspl
      241 nqilygppgt gktyhtieaa vkaaepdfvw ksrsevkaky delindkrir fvtfhqsygy
      301 eefveglkae tdgehlqykv epgvfrrlad sarakrvski ersssysldg rkiwkmslgn
      361 tqtdegemvy seclendyil lgyggnidfs gcnsigkike kfldagyelk pqdynvtavn
      421 tlvnkmsegd lvvvsdgnhk fkaiaeitsa yecikddrdw yfqkrdvkwl mtcdeprpid
      481 elfstalsqm tlynlkdsvi sreklsalln eskqelevak nhvlvidein rgniskifge
      541 litliepskr aggeesieli lphshepftv psnlyiigtm ntadrslamm dtalrrrfdf
      601 vemmpepnlf nnhevkgidl tqlldalnkr ievlydreht lghaflypay nesdekvafd
      661 llqaafrtki iplleeyfye dwnkirlvlg dnqkddsmkl vresresydd ifgtghgldt
      721 yaedsirysl ipfekgslwe evdtykaiyd pkltaskqmv ansdae
//
LOCUS       WP_257975944             577 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975944
VERSION     WP_257975944.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>577
                     /product="cadherin-like domain-containing protein"
     Region          <26..81
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          113..208
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          211..301
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          <280..534
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
ORIGIN      
        1 mtstdvgpld lnvqltqeqg skdvtddvlq iisaieqgqd psavdeefap aagenggssl
       61 qtsativrdg tellastsfe tigieslgls qtqvlalsdl frsnlqtsad stdkplattp
      121 vtldaieedg gsiiitteel lsnvddedkd tlsvenliid kgngtlvdng dgtwtftpqi
      181 dddtevsftf diiddedlvv sgsanldilp indapnaend vitteedtav tidvlvndsd
      241 vegdvlsiqs asvpseqgsv divdgklvft paenfngeat ityivtdgdl tdeakvtvtv
      301 tpvndspvav ddtvstqedt vvtidvlpnd sdvdgdklsl qsasvpkaqg kveivegklv
      361 ftpaenfngd aeitytvtdg qltdeakvtv tvnpvndapi ikvdavesit edavntdtvv
      421 atltvrdtdt pedqltvsle nnsngyfvlv gdevkltqag vdavnndeln lkgltisasv
      481 sdgvnptasd sdslivnrvn daptikvdav esitedavst dtvvatltvr dtdtpedqlt
      541 vslennsngy fvlvgnevkl tqagvdavnn delnlkd
//
LOCUS       WP_257975977             182 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257975977
VERSION     WP_257975977.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..182
                     /product="helicase-related protein"
     Region          <1..182
                     /region_name="PRK10917"
                     /note="ATP-dependent DNA helicase RecG; Provisional"
                     /db_xref="CDD:236794"
ORIGIN      
        1 qrklpdvkig lvhgrmkpae kqavmqefkd nklhllvatt vievgvdvpn sslmiienpe
       61 rlglaqlhql rgrvgrgsva shcvllyhsp lsktaqkrlg vlresndgfv iaqkdleirg
      121 pgellgtkqt gladfkiadl vrdqrlipev qriarhihdn yptnaaaiid rwlgerdiys
      181 ka
//
LOCUS       WP_257975980             304 aa            linear   BCT 02-MAR-2025
DEFINITION  TraM recognition domain-containing protein [Vibrio
            parahaemolyticus].
ACCESSION   WP_257975980
VERSION     WP_257975980.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   Lu,J., Wong,J.J., Edwards,R.A., Manchak,J., Frost,L.S. and
            Glover,J.N.
  TITLE     Structural basis of specific TraD-TraM recognition during F
            plasmid-mediated bacterial conjugation
  JOURNAL   Mol Microbiol 70 (1), 89-99 (2008)
   PUBMED   18717787
REFERENCE   2  (residues 1 to 304)
  AUTHORS   Schroder,G., Krause,S., Zechner,E.L., Traxler,B., Yeo,H.J.,
            Lurz,R., Waksman,G. and Lanka,E.
  TITLE     TraG-like proteins of DNA transfer systems and of the Helicobacter
            pylori type IV secretion system: inner membrane gate for exported
            substrates?
  JOURNAL   J Bacteriol 184 (10), 2767-2779 (2002)
   PUBMED   11976307
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024108.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12696.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..304
                     /product="TraM recognition domain-containing protein"
                     /calculated_mol_wt=33260
     Region          <2..240
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 masllpllek lgtgkaaeii sprhtpader piidwrevim qggvvyvgld alsdttvaaa
       61 fgnsmfadlc slageiykfg napgfakvkp rnimihadef neligdefip ilnkargakf
      121 ivtaytqtes diearlgsps kaaqtkgnfn sliclrvreq ktaqiltsrv aqvtikdiip
      181 dtgatdspgs gtgfrstnkd tlqskevplv sdnditnlpi gqayaelega kiwklrfplp
      241 gsegdidmpe diqtlvngml eksqthqdth awlheteqft qwintayqel deeheedale
      301 spef
//
LOCUS       WP_257975990             224 aa            linear   BCT 02-MAR-2025
DEFINITION  M3 family metallopeptidase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257975990
VERSION     WP_257975990.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013591.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01432.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..224
                     /product="M3 family metallopeptidase"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          <1..222
                     /region_name="PRK10911"
                     /note="oligopeptidase A; Provisional"
                     /db_xref="CDD:182832"
ORIGIN      
        1 alfthdevvt lfhefghgih hmltqvetga vsgingvpwd avelpsqfle nwcweedala
       61 fisghyetge plpkvmldkm laaknfqsam gilrqlefgl fdftlhteyd pevgarvlet
      121 laevkekvav vpavewarfs hsfghifagg ysagyysylw aevlssdafs rfeeegifnk
      181 etgqsflnni lemggseepm elfkrfrgre pqidallrhs giaa
//
LOCUS       WP_257976000             266 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257976000
VERSION     WP_257976000.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 266)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 266)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 266)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 266)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..266
                     /product="ATP-binding protein"
     Region          <10..263
                     /region_name="COG4192"
                     /note="Signal transduction histidine kinase regulating
                     phosphoglycerate transport system [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443346"
ORIGIN      
        1 lektqdlllk nqqleneiee rirtednlkk tqdeliqaak mavvgqtmts lahelnqpln
       61 amstylysar mfleqespek vgesithieg latrmskiin slrqfarkpe gerevksvsv
      121 hevaeqasti vntrakrqqi iienqlpddv kvqgdmlale qvfinvlvns cdalmestrd
      181 eqkriqmalv ertsqttlia isdngigfge eivqrifqpf vstkevglgl gmnickslie
      241 khkgsiylas slekgamvvl elpneq
//
LOCUS       WP_257976013             574 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257976013
VERSION     WP_257976013.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 574)
  AUTHORS   Clarke,T.A., Edwards,M.J., Gates,A.J., Hall,A., White,G.F.,
            Bradley,J., Reardon,C.L., Shi,L., Beliaev,A.S., Marshall,M.J.,
            Wang,Z., Watmough,N.J., Fredrickson,J.K., Zachara,J.M., Butt,J.N.
            and Richardson,D.J.
  TITLE     Structure of a bacterial cell surface decaheme electron conduit
  JOURNAL   Proc Natl Acad Sci U S A 108 (23), 9384-9389 (2011)
   PUBMED   21606337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037016.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17963.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..574
                     /product="Ig-like domain-containing protein"
     Region          30..261
                     /region_name="Peptidase_M11"
                     /note="Gametolysin peptidase M11; cl21618"
                     /db_xref="CDD:354892"
     Region          327..>518
                     /region_name="COG1470"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:441079"
     Region          473..546
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
ORIGIN      
        1 qniqyakaag ssigqqdtlv mllnfkenpn dqpitseeah alvfgevndf yqensygktw
       61 lsgqvagwyt lsvsnqvcdy psvqaeadkm aradgvvled yqriiyimtq sgcagggsat
      121 tgktfpsray idgtlsarvi ahefghnlgl shakaldcgd asvsnncsvi eygdsydvmg
      181 tpdmgyinty ykermgwlnd aespniltai qdglyeiaey etqdikqnia lkiprgvnpn
      241 tglkewfyve yrqamgydqf lddrsymlfr gdvtdgvivr lveegaeesy ilhmkpnsdy
      301 sqvygrkdwk dtalpvgdsf tdpvsgltin lasaangfag vnvsfggsvt psvcemsaps
      361 vsvkatsdtq vnagdtveyq ltvtntandv cgtirfdvsa qvesgwqass qsislasges
      421 svatiavtsa lsatsgdypv tfnvvnmkde aynvakqaty avaeqqtgsg dvvavddnvq
      481 mskvstvsin vlgndiiadg vsveisamsa pskgtvklls dgsiqytpak rfknqdsfsy
      541 titsgnvtst amvtvalqss pdsggsspgk gknk
//
LOCUS       WP_257976043             175 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6795 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257976043
VERSION     WP_257976043.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042847.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20598.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..175
                     /product="DUF6795 domain-containing protein"
     Region          23..129
                     /region_name="DUF6795"
                     /note="Domain of unknown function (DUF6795); cl03084"
                     /db_xref="CDD:470730"
ORIGIN      
        1 fsvgasamfw pfkkydvems pevrgvikld gkpqvgltvh relfyegyke gktlkdeaqt
       61 nelgefffpg vtvrsrapgd ifggslkvyq yvcvdcesek kevwgawvpt egadslrwml
      121 mnidcelsnn kqihevdisp estrrtpvhs vcdwnserin tyeydeatdt hvlkk
//
LOCUS       WP_257976065              69 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257976065
VERSION     WP_257976065.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 69)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>69
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          2..>64
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 iassifgsil rklqerypav ifeisssnkv enllesnvdi airlndvvdd nliahkvgny
       61 ndvlisnns
//
LOCUS       WP_257976101             350 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2971 domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257976101
VERSION     WP_257976101.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022633.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11185.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..350
                     /product="DUF2971 domain-containing protein"
                     /calculated_mol_wt=39926
ORIGIN      
        1 mmlvkyyglv fdnddqswsp radfisnglf ritqpkylnd kgsesrlwpy fnefspadya
       61 warkehyklq avpsyvpsde elenfflkpc girygeqiph mlrqegfqsm eeydkeqlvi
      121 aaerinsfiv ealscqlgvl slaksdtnel mwthyasegk glavtfneeh pffsqfppke
      181 vsytadkras ltyykgsiri ngapiknfqv ssfqnsfgvl qsllnngidv aefserllys
      241 kaeqwspede vrivcplils dmkigpqiqp dfgvqlpdel snlfptyaei nlkqipfdaf
      301 esivfgysms eadklkiiel vgknenlshl klrvakhnif gkleavdlvv
//
LOCUS       WP_257976160             179 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257976160
VERSION     WP_257976160.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 179)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 179)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 179)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 179)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>179
                     /product="ATP-binding protein"
     Region          <3..71
                     /region_name="HATPase"
                     /note="Histidine kinase-like ATPase domain; cl00075"
                     /db_xref="CDD:469604"
     Site            order(3,5,7,9,37..40,56,58,63..64,66)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340399"
     Site            order(19,40)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340399"
ORIGIN      
        1 mkvadtgigm tdgqlegiln pfvqaddsit rkyggtglgl sivdrliecm ggvlcidsqf
       61 glgttitvkl piercdsepe vclnwtysea lplsirqwcd awkmqpatla rsmanlyaaq
      121 dkeasfdgvm lrddreilgn ltfrelqypd alfnllsqtq qetkldelks eevswilgt
//
LOCUS       WP_257976163              64 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257976163
VERSION     WP_257976163.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 64)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..64
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>64
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <1..57
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 mlsnssikda iqfrfpmvfi demqdtqkfq deflndlfld esvklqrfgd pdqaiysvge
       61 egnq
//
LOCUS       WP_257976177              53 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ATP-binding protein [Staphylococcus intermedius
            group].
ACCESSION   WP_257976177
VERSION     WP_257976177.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus intermedius group
  ORGANISM  Staphylococcus intermedius group
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 53)
  AUTHORS   Yeo,C.C. and Poh,C.L.
  TITLE     Characterization of IS1474, an insertion sequence of the IS21
            family isolated from Pseudomonas alcaligenes NCIB 9867
  JOURNAL   FEMS Microbiol Lett 149 (2), 257-263 (1997)
   PUBMED   9141667
REFERENCE   2  (residues 1 to 53)
  AUTHORS   Solinas,F., Marconi,A.M., Ruzzi,M. and Zennaro,E.
  TITLE     Characterization and sequence of a novel insertion sequence,
            IS1162, from Pseudomonas fluorescens
  JOURNAL   Gene 155 (1), 77-82 (1995)
   PUBMED   7698671
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01695.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..53
                     /organism="Staphylococcus intermedius group"
                     /db_xref="taxon:2815305"
     Protein         1..53
                     /product="ATP-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=6028
     Region          <10..41
                     /region_name="IS21_help_AAA"
                     /note="IS21-like element helper ATPase IstB; NF038214"
                     /db_xref="CDD:439516"
ORIGIN      
        1 mspflvedsf sdkitsaaii nrlihpskif kitgdsyrlk dyksekslni rhf
//
LOCUS       WP_257976189             468 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257976189
VERSION     WP_257976189.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>468
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          248..338
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          340..430
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq plpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi titteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnaendvit teedtavtid vlvndsdveg dalsiqsasv pseqgsvdiv
      301 dgklvftpae nfngeatity ivtdgdltde akvtvtvtpv ndspvavddt tsiqedtavt
      361 idvltndtdv dgdklsiesa svpkeqgtve vvdgklvftp aenfngdaei tytvtdgelt
      421 deakvtvtvn pvndastikv davesitena vstdtvvatl tvrdtdtp
//
LOCUS       WP_257976244             162 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar phosphate nucleotidyltransferase, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257976244
VERSION     WP_257976244.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 162)
  AUTHORS   Jensen,S.O. and Reeves,P.R.
  TITLE     Domain organisation in phosphomannose isomerases (types I and II)
  JOURNAL   Biochim Biophys Acta 1382 (1), 5-7 (1998)
   PUBMED   9507048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012695.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00483.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>162
                     /product="sugar phosphate nucleotidyltransferase"
                     /GO_function="GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          1..162
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
ORIGIN      
        1 fikagfsnfy isthympeqi hqhfgdgsdl gvsisyvhed tplgtggalg llpenmprnl
       61 plimingdvl tkvdfqrlln fhlendadat mcvreydyqi pygvingegn qitsmvekpi
      121 qrffvnagiy vvsprviesv eknqkidmpt lleqhmkerq kv
//
LOCUS       WP_257976246              66 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3693 domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257976246
VERSION     WP_257976246.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023888.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12472.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..66
                     /product="DUF3693 domain-containing protein"
                     /calculated_mol_wt=7217
     Region          <1..66
                     /region_name="DUF3693"
                     /note="Phage related protein; cl22943"
                     /db_xref="CDD:451460"
ORIGIN      
        1 makkfdrlgl ssisitcael tlviaspkes lyqcalwalm lnaiayaypi kclsfegqfn
       61 evsrnd
//
LOCUS       WP_257976250             100 aa            linear   BCT 02-MAR-2025
DEFINITION  CBS domain-containing protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257976250
VERSION     WP_257976250.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 100)
  AUTHORS   Scott,J.W., Hawley,S.A., Green,K.A., Anis,M., Stewart,G.,
            Scullion,G.A., Norman,D.G. and Hardie,D.G.
  TITLE     CBS domains form energy-sensing modules whose binding of adenosine
            ligands is disrupted by disease mutations
  JOURNAL   J Clin Invest 113 (2), 274-284 (2004)
   PUBMED   14722619
REFERENCE   2  (residues 1 to 100)
  AUTHORS   Kemp,B.E.
  TITLE     Bateman domains and adenosine derivatives form a binding contract
  JOURNAL   J Clin Invest 113 (2), 182-184 (2004)
   PUBMED   14722609
REFERENCE   3  (residues 1 to 100)
  AUTHORS   Janosik,M., Kery,V., Gaustadnes,M., Maclean,K.N. and Kraus,J.P.
  TITLE     Regulation of human cystathionine beta-synthase by
            S-adenosyl-L-methionine: evidence for two catalytically active
            conformations involving an autoinhibitory domain in the C-terminal
            region
  JOURNAL   Biochemistry 40 (35), 10625-10633 (2001)
   PUBMED   11524006
REFERENCE   4  (residues 1 to 100)
  AUTHORS   Zhang,R., Evans,G., Rotella,F.J., Westbrook,E.M., Beno,D.,
            Huberman,E., Joachimiak,A. and Collart,F.R.
  TITLE     Characteristics and crystal structure of bacterial
            inosine-5'-monophosphate dehydrogenase
  JOURNAL   Biochemistry 38 (15), 4691-4700 (1999)
   PUBMED   10200156
REFERENCE   5  (residues 1 to 100)
  AUTHORS   Ponting,C.P.
  TITLE     CBS domains in CIC chloride channels implicated in myotonia and
            nephrolithiasis (kidney stones)
  JOURNAL   J Mol Med (Berl) 75 (3), 160-163 (1997)
   PUBMED   9106071
REFERENCE   6  (residues 1 to 100)
  AUTHORS   Bateman,A.
  TITLE     The structure of a domain common to archaebacteria and the
            homocystinuria disease protein
  JOURNAL   Trends Biochem Sci 22 (1), 12-13 (1997)
   PUBMED   9020585
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012780.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00571.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>100
                     /product="CBS domain-containing protein"
     Region          1..87
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
     Site            order(8,19,24..25,28,50,72..74)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:341358"
     Region          50..87
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
ORIGIN      
        1 mskkgctcal vtndnalvgv vtetdmtsrv vaeafniyrp vedimnahpq svdqnepvis
       61 alnlmmkhni rnipvldknk qvlglispqe lvqrhgiqav
//
LOCUS       WP_257976283             211 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257976283
VERSION     WP_257976283.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024375.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12973.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..211
                     /product="cupin domain-containing protein"
     Region          1..103
                     /region_name="cupin_ChrR_1"
                     /note="Marinobacter hydrocarbonoclasticus anti-ECFsigma
                     factor ChrR, and similar proteins; 2 heterologous tandem
                     repeats of cupin domain; cd20303"
                     /db_xref="CDD:380437"
     Site            order(1..5,25..26,28,33..34,36,57,59,61,72,75..81,83..84,
                     97,99,101,103)
                     /site_type="other"
                     /note="intramolecular domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:380437"
     Region          107..207
                     /region_name="cupin_ChrR_1"
                     /note="Marinobacter hydrocarbonoclasticus anti-ECFsigma
                     factor ChrR, and similar proteins; 2 heterologous tandem
                     repeats of cupin domain; cd20303"
                     /db_xref="CDD:380437"
     Site            order(107..113,132..133,135,137..138,140,161,163,165,176,
                     179..185,187..188,201,203,205,207)
                     /site_type="other"
                     /note="intramolecular domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:380437"
ORIGIN      
        1 qrvvietgrq nwvaspsqgv wrkplereak esghvtsvvk yeagsrfsph lhpygeeifv
       61 ldgvfsdeng dypagsylrn ppgslhapfs ekgcvilvkl nqfdpndlkt vrintretew
      121 lpgigglqvm plhdfkhehv alvkwpkgek fqphkhfgge eifvlsgefr delgiyptht
      181 wlrsphmseh fpfveeetvi wvktghlplg s
//
LOCUS       WP_257976354             419 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Staphylococcus pseudintermedius].
ACCESSION   WP_257976354
VERSION     WP_257976354.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus intermedius
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Staphylococcus pseudintermedius"
                     /db_xref="taxon:283734"
     Protein         1..419
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45387
     Region          14..395
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(20..21,24..25,28,65,115..116,118..120,123,142,
                     145..146,149,221,224,230,233..235,238,269,273,322..323,
                     327,331,347,350..351,354..355,358)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mieqtwrrnf rtlwlgqfma iagltvlvpl lpiyiaslkq lnifeiqlws giaiaapait
       61 tmlasplwgk lgdrlsrkwm vlralfglgl clllmafctt pfqfvlvrll qglfggvvea
      121 ssafasgeap esergsvlgk lqsavsagsl vgpliggvla tvlgfqallf siglitllms
      181 ilgvffliet ththanteqp qvkksvrqsm kcllctqltc rfiivgvlan famygmmtal
      241 aplvssvnhv hiddraavgi lqsafwtasm msapfwgyfn dkayvknvyi iasilcgisv
      301 lwqgvatdlw mlgiarvlqg ltysaliqsv mfvvvnashh qlkgtfvgst nsflvvgqiv
      361 gslsgaivts ytapamtfil mgvifalsst llwtshiknq kinpiltgfw evkeqrakl
//
LOCUS       WP_257976359             174 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257976359
VERSION     WP_257976359.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>174
                     /product="ABC transporter substrate-binding protein"
     Region          22..>174
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 aiiatattgf asvataaers eltihpkeft tfvrnfnpfl gatnlhtttd fiyeplvvfn
       61 emhgntpvfr laenfkmadd lmsvtfdirk gvkwsdgqaf taddvvysfn lvkekpeldq
      121 sginswvtgv ekvndyqvkf rlseansnvp yeiakvpvvp khvwskvkdp atft
//
LOCUS       WP_257976362             134 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF294 nucleotidyltransferase-like domain-containing protein,
            partial [Vibrio parahaemolyticus].
ACCESSION   WP_257976362
VERSION     WP_257976362.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015410.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03445.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>134
                     /product="DUF294 nucleotidyltransferase-like
                     domain-containing protein"
                     /GO_function="GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA]"
     Region          19..134
                     /region_name="DUF294"
                     /note="Putative nucleotidyltransferase DUF294; pfam03445"
                     /db_xref="CDD:460919"
ORIGIN      
        1 miekiskcns leslsllvke rqavfeamie shlpanvigq vlmmiydaft crliklaern
       61 vglppcnyaw laagsharge vhlgsdqdna lvlddsates driyfrhfam yickglaecg
      121 yplckgrfma atpk
//
LOCUS       WP_257976365              82 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6058 family natural product biosynthesis protein, partial
            [Vibrio parahaemolyticus].
ACCESSION   WP_257976365
VERSION     WP_257976365.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 82)
  AUTHORS   Qin,Z., Munnoch,J.T., Devine,R., Holmes,N.A., Seipke,R.F.,
            Wilkinson,K.A., Wilkinson,B. and Hutchings,M.I.
  TITLE     Formicamycins, antibacterial polyketides produced by Streptomyces
            formicae isolated from African Tetraponera plant-ants
  JOURNAL   Chem Sci 8 (4), 3218-3227 (2017)
   PUBMED   28507698
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039336.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19531.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..82
                     /product="DUF6058 family natural product biosynthesis
                     protein"
     Region          <1..78
                     /region_name="DUF6058"
                     /note="Family of unknown function (DUF6058); pfam19531"
                     /db_xref="CDD:437363"
ORIGIN      
        1 qgtyglctqt glpediaakg faveqikall erdvldsnei krleyfvnll dnasspfaph
       61 erlnssrhrl vnevrrkykl qs
//
LOCUS       WP_257976404             166 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257976404
VERSION     WP_257976404.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>166
                     /product="ABC transporter substrate-binding protein"
     Region          34..>166
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mtkkmpfsvl aaltavsfql haaelpadie wvsnnneplf aseeavyggt yrtyiesfpq
       61 tlrsvgpdan sglrqylmdg tpkmaqrhpn tgkwipqlak swafgednkt vyfklddtak
      121 wsdgekitad dyvfmmqyyt skdiidpwyn dfftnsivsv ekiddy
//
LOCUS       WP_257976427             426 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1430 domain-containing protein [Staphylococcus
            pseudintermedius].
ACCESSION   WP_257976427
VERSION     WP_257976427.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus intermedius
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018897.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07242.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Staphylococcus pseudintermedius"
                     /db_xref="taxon:283734"
     Protein         1..426
                     /product="DUF1430 domain-containing protein"
                     /calculated_mol_wt=50393
     Region          <5..426
                     /region_name="COG4652"
                     /note="Uncharacterized conserved protein, DUF1430 domain
                     [Function unknown]"
                     /db_xref="CDD:443690"
ORIGIN      
        1 mlkwlgldgq leyfvsrliv adilfwmils issllscill iridiplmik glkpyrllra
       61 mnhisklsml vlltllilpn lnqmkkleqi qetetwwgkl ddyytidlkp irrsmneeme
      121 fakryhqmvv yseqheqall mnqnvlyeps qtnytpeegn vlfvnqnfvd ffkfqlrdlp
      181 nledrpgqie lylppqakne tsairadfqd wvnyqlpnpe sktkvqvtql knpydiyafd
      241 vrtglsttym kspailmlna kdltddfyya tlsqgelifk nyenivrnid rfnlkddvqg
      301 vtnykdsvmk kyreaqtkwm vysfssaiam avlcivtlld vlhyfeqhrq wllmrkmfgf
      361 rrwqnyrnyi ilnglftali gaflfektqn snvlwifgvi lllqiviqwa yihylekqfn
      421 alirea
//
LOCUS       WP_257976430             284 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2232 domain-containing protein [Staphylococcus
            pseudintermedius].
ACCESSION   WP_257976430
VERSION     WP_257976430.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus intermedius
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021506.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09991.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Staphylococcus pseudintermedius"
                     /db_xref="taxon:283734"
     Protein         1..284
                     /product="DUF2232 domain-containing protein"
                     /calculated_mol_wt=31828
     Region          1..283
                     /region_name="DUF2232"
                     /note="Predicted membrane protein (DUF2232); cl01728"
                     /db_xref="CDD:470315"
ORIGIN      
        1 mtlvihvmpg laiiltcfsl ipgivlwyqs khsfglvali aiilstltgn ifvmtfliii
       61 lvlsmvisql liqraskeri lylttfvasv ltlsammilq tlkklpyadd llqpyraimh
      121 qaaelenldq qaqeilnnsi qqlaiqlpgm ivvaiaiyvf itlliifpil rkfkvatpvf
      181 rplffwqmkr svfimyalal lttittqpat tpnsiginfq ivlgfllviq glsfihffas
      241 ikrmpgalrv ilvivgvlfy pmtrliglld lglnlkrmik ndkr
//
LOCUS       WP_257976450             112 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase [Staphylococcus pseudintermedius].
ACCESSION   WP_257976450
VERSION     WP_257976450.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus intermedius
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Staphylococcus pseudintermedius"
                     /db_xref="taxon:283734"
     Protein         1..112
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=12345
     Region          <1..83
                     /region_name="Peptidases_S8_S53"
                     /note="Peptidase domain in the S8 and S53 families;
                     cl10459"
                     /db_xref="CDD:415849"
ORIGIN      
        1 mkeandkgii lvsaagnnln snsdfparfk evysiaaidk dkqnflyspn knvdfrtpga
       61 dvytlngedk ivkdsgssfs aayftsylia ntdsaknfid iikkyplkyk en
//
LOCUS       WP_257976457             119 aa            linear   BCT 02-MAR-2025
DEFINITION  ImmA/IrrE family metallo-endopeptidase [Staphylococcus
            pseudintermedius].
ACCESSION   WP_257976457
VERSION     WP_257976457.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus intermedius
            group.
REFERENCE   1  (residues 1 to 119)
  AUTHORS   Masiewicz,P., Brzostek,A., Wolanski,M., Dziadek,J. and
            Zakrzewska-Czerwinska,J.
  TITLE     A novel role of the PrpR as a transcription factor involved in the
            regulation of methylcitrate pathway in Mycobacterium tuberculosis
  JOURNAL   PLoS One 7 (8), e43651 (2012)
   PUBMED   22916289
  REMARK    Erratum:[PLoS One. 2014;9(11):e113015]
REFERENCE   2  (residues 1 to 119)
  AUTHORS   Vujicic-Zagar,A., Dulermo,R., Le Gorrec,M., Vannier,F., Servant,P.,
            Sommer,S., de Groot,A. and Serre,L.
  TITLE     Crystal structure of the IrrE protein, a central regulator of DNA
            damage repair in deinococcaceae
  JOURNAL   J Mol Biol 386 (3), 704-716 (2009)
   PUBMED   19150362
REFERENCE   3  (residues 1 to 119)
  AUTHORS   Bose,B., Auchtung,J.M., Lee,C.A. and Grossman,A.D.
  TITLE     A conserved anti-repressor controls horizontal gene transfer by
            proteolysis
  JOURNAL   Mol Microbiol 70 (3), 570-582 (2008)
   PUBMED   18761623
REFERENCE   4  (residues 1 to 119)
  AUTHORS   Gerstmeir,R., Cramer,A., Dangel,P., Schaffer,S. and Eikmanns,B.J.
  TITLE     RamB, a novel transcriptional regulator of genes involved in
            acetate metabolism of Corynebacterium glutamicum
  JOURNAL   J Bacteriol 186 (9), 2798-2809 (2004)
   PUBMED   15090522
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017885.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06114.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Staphylococcus pseudintermedius"
                     /db_xref="taxon:283734"
     Protein         1..119
                     /product="ImmA/IrrE family metallo-endopeptidase"
                     /calculated_mol_wt=13565
ORIGIN      
        1 mskyeelmkk hshipisdnh klkgnfkgif angailidkd lsnfqkhavl aeeiahykyt
       61 ygnildqsnm lnkklelfar rkayesvitl qglidaynng isnihemadf fevnlgfmk
//
LOCUS       WP_257976527             470 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257976527
VERSION     WP_257976527.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>470
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          <202..467
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq plpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnaendvit teedtavtid vlvndsdveg dalsiqsasv pseqgsvdiv
      301 dgklvftpae nfngeatity ivtdgdltde akvtvtvtpv ndspvavddt tsiqedtavt
      361 idvltndtdv dgdklsiesa svpkeqgtve vvdgklvftp aenfngdaei tytvtdgelt
      421 deakvtvtvn pvndaptikv eavesiteda vstdtvvatl tvrdtdtped
//
LOCUS       WP_257976563             147 aa            linear   BCT 02-MAR-2025
DEFINITION  imm11 family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257976563
VERSION     WP_257976563.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 147)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019408.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07791.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..147
                     /product="imm11 family protein"
ORIGIN      
        1 vwkdddiyei ealdlirgga fnvskpiael imsfdpygve vypakltcsg dgvlteryii
       61 avdnlvdvvd ydksikvtdv ttrfylsdek ikelpdskrh vfkpvgmtkt ffsielfeal
      121 vrldeegkis tsivafsfdt seetprv
//
LOCUS       WP_257976569             281 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6056 family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257976569
VERSION     WP_257976569.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039639.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19528.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>281
                     /product="DUF6056 family protein"
     Region          15..>264
                     /region_name="DUF6056"
                     /note="Family of unknown function (DUF6056); pfam19528"
                     /db_xref="CDD:437360"
ORIGIN      
        1 mynlvrsryl vttvflvafm fclnlafpli sddfchllss gnieavihsy tswnartgel
       61 lsvfltgltg ssfavvnsfv faiiigtifp llfarqgntk ddslfiitff tllslstvfg
      121 avflwragam nyawslalcl lhfvvyryhy agatswyera nplvvvlfcl lsfaagmssf
      181 dlgalgclih vtimfyrktt hqsskirftv palfyitgfl alyiapgtai rsqgfddyvs
      241 lgqlvtwlyt lelpafashy lnalgksmnq tnyfvtlasi t
//
LOCUS       WP_257976594             204 aa            linear   BCT 02-MAR-2025
DEFINITION  replication protein RepA, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257976594
VERSION     WP_257976594.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 204)
  AUTHORS   Basu,A., Chawla-Sarkar,M., Chakrabarti,S. and Das Gupta,S.K.
  TITLE     Origin binding activity of the Mycobacterial plasmid pAL5000
            replication protein RepB is stimulated through interactions with
            host factors and coupled expression of repA
  JOURNAL   J Bacteriol 184 (8), 2204-2214 (2002)
   PUBMED   11914352
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016670.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04796.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>204
                     /product="replication protein RepA"
     Region          92..>179
                     /region_name="RPA"
                     /note="Replication initiator protein A; cl19398"
                     /db_xref="CDD:473167"
ORIGIN      
        1 mtlkdvtdvq argtirqksa sgasgklels tkyidniiai qecsaqeane lgfiarlliq
       61 atiphskpes newsrkngnf tmhmmapssv glpygcyarl llvwmttqav rnksrldkgy
      121 igetearrle lgnsqrsfma elglsgtggk dgsiprlreq msklfkttis vmftehnegd
      181 eyisedeiga rvadvshiww stkh
//
LOCUS       WP_257976634             179 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin-binding protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257976634
VERSION     WP_257976634.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 179)
  AUTHORS   Sola,M., Kneussel,M., Heck,I.S., Betz,H. and Weissenhorn,W.
  TITLE     X-ray crystal structure of the trimeric N-terminal domain of
            gephyrin
  JOURNAL   J Biol Chem 276 (27), 25294-25301 (2001)
   PUBMED   11325967
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013183.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00994.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>179
                     /product="molybdopterin-binding protein"
     Region          1..>173
                     /region_name="PRK03673"
                     /note="nicotinamide mononucleotide deamidase-related
                     protein YfaY"
                     /db_xref="CDD:179629"
ORIGIN      
        1 mkiamlstge evlhgdivdt naawlsslfy qhgfgltkrs tvgdkqssli eeflmlsfnn
       61 dvvivngglg pttddmsaaa aakaaecklv lfkewleqle smyarrgipm pdsnlkqaml
      121 petaeildnp igtacgfkml indaifyftp gvpsefklma etqilpdlrr vfpdvkgsc
//
LOCUS       WP_257976656             226 aa            linear   BCT 02-MAR-2025
DEFINITION  glutamate--tRNA ligase family protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257976656
VERSION     WP_257976656.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 226)
  AUTHORS   Rath,V.L., Silvian,L.F., Beijer,B., Sproat,B.S. and Steitz,T.A.
  TITLE     How glutaminyl-tRNA synthetase selects glutamine
  JOURNAL   Structure 6 (4), 439-449 (1998)
   PUBMED   9562563
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012951.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00749.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>226
                     /product="glutamate--tRNA ligase family protein"
                     /GO_function="GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
     Region          1..>226
                     /region_name="PRK05347"
                     /note="glutaminyl-tRNA synthetase; Provisional"
                     /db_xref="CDD:235424"
ORIGIN      
        1 mseadarpsn firqiidkdl adgkhtsvht rfppepngyl highaksicl nfgiaqdyqg
       61 qcnlrfddtn pekedieyve sikkdvnwlg fewdgevcys snyfdklyey aielinkgla
      121 yvdelspeqi reyrgtlkep gkpspyrdrs veenlalfek mragefeegk aclrakidmg
      181 ssfmvmrdpv lyrvrfathh qtgdkwciyp mydfthcisd alegit
//
LOCUS       WP_257976658              64 aa            linear   BCT 02-MAR-2025
DEFINITION  OmpA family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257976658
VERSION     WP_257976658.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012894.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00691.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..64
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>64
                     /product="OmpA family protein"
     Region          2..>64
                     /region_name="OmpA_C-like"
                     /note="Peptidoglycan binding domains similar to the
                     C-terminal domain of outer-membrane protein OmpA; cl30079"
                     /db_xref="CDD:453091"
     Site            order(9..10,41..42,45,49..50,53)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:143586"
ORIGIN      
        1 mslvlhydtn ehyltnvhkq aiskylelvn edkrilvegh tddvgsqayn kslslrrast
       61 asky
//
LOCUS       WP_257976680              67 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257976680
VERSION     WP_257976680.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 67)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>67
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          14..>67
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 lnyrarslsd cisgkfkitm pnsiassifg silrklqery pavifeisss nkvenllesn
       61 vdiairl
//
LOCUS       WP_257976683             147 aa            linear   BCT 02-MAR-2025
DEFINITION  CBS domain-containing protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257976683
VERSION     WP_257976683.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 147)
  AUTHORS   Scott,J.W., Hawley,S.A., Green,K.A., Anis,M., Stewart,G.,
            Scullion,G.A., Norman,D.G. and Hardie,D.G.
  TITLE     CBS domains form energy-sensing modules whose binding of adenosine
            ligands is disrupted by disease mutations
  JOURNAL   J Clin Invest 113 (2), 274-284 (2004)
   PUBMED   14722619
REFERENCE   2  (residues 1 to 147)
  AUTHORS   Kemp,B.E.
  TITLE     Bateman domains and adenosine derivatives form a binding contract
  JOURNAL   J Clin Invest 113 (2), 182-184 (2004)
   PUBMED   14722609
REFERENCE   3  (residues 1 to 147)
  AUTHORS   Janosik,M., Kery,V., Gaustadnes,M., Maclean,K.N. and Kraus,J.P.
  TITLE     Regulation of human cystathionine beta-synthase by
            S-adenosyl-L-methionine: evidence for two catalytically active
            conformations involving an autoinhibitory domain in the C-terminal
            region
  JOURNAL   Biochemistry 40 (35), 10625-10633 (2001)
   PUBMED   11524006
REFERENCE   4  (residues 1 to 147)
  AUTHORS   Zhang,R., Evans,G., Rotella,F.J., Westbrook,E.M., Beno,D.,
            Huberman,E., Joachimiak,A. and Collart,F.R.
  TITLE     Characteristics and crystal structure of bacterial
            inosine-5'-monophosphate dehydrogenase
  JOURNAL   Biochemistry 38 (15), 4691-4700 (1999)
   PUBMED   10200156
REFERENCE   5  (residues 1 to 147)
  AUTHORS   Ponting,C.P.
  TITLE     CBS domains in CIC chloride channels implicated in myotonia and
            nephrolithiasis (kidney stones)
  JOURNAL   J Mol Med (Berl) 75 (3), 160-163 (1997)
   PUBMED   9106071
REFERENCE   6  (residues 1 to 147)
  AUTHORS   Bateman,A.
  TITLE     The structure of a domain common to archaebacteria and the
            homocystinuria disease protein
  JOURNAL   Trends Biochem Sci 22 (1), 12-13 (1997)
   PUBMED   9020585
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012780.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00571.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>147
                     /product="CBS domain-containing protein"
     Region          2..112
                     /region_name="CBS_pair_NTP_transferase_assoc"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domain associated with the NTP
                     (Nucleotidyl transferase) domain; cd04607"
                     /db_xref="CDD:341381"
     Region          2..64
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341381"
     Site            order(3..5,27..29,91,104,106,108..109,112)
                     /site_type="other"
                     /note="putative ligand binding site II [chemical binding]"
                     /db_xref="CDD:341381"
     Site            order(27,40,44..45,48,69,91..93,108)
                     /site_type="other"
                     /note="putative ligand binding site I [chemical binding]"
                     /db_xref="CDD:341381"
     Region          69..112
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341381"
     Region          120..>147
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
ORIGIN      
        1 cwqktlises stikqaleii nsealrvavv vdqdkkllgm itdgdirrgl lndlmltdpv
       61 akvmnsnpit akqgaskell velmeqkqil svplldqenk vvgletlhsa lskdkyqnpv
      121 fimaggfgtr lrpltdncpk pmlkvgd
//
LOCUS       WP_257976730             313 aa            linear   BCT 02-MAR-2025
DEFINITION  Solitary outer membrane autotransporter beta-barrel domain [Vibrio
            parahaemolyticus].
ACCESSION   WP_257976730
VERSION     WP_257976730.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 313)
  AUTHORS   Prakash,A., Yogeeshwari,S., Sircar,S. and Agrawal,S.
  TITLE     Protein domain of unknown function 3233 is a translocation domain
            of autotransporter secretory mechanism in gamma proteobacteria
  JOURNAL   PLoS One 6 (11), e25570 (2011)
   PUBMED   22073138
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022990.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11557.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..313
                     /product="Solitary outer membrane autotransporter
                     beta-barrel domain"
                     /calculated_mol_wt=35483
     Region          1..312
                     /region_name="Omp_AT"
                     /note="Solitary outer membrane autotransporter beta-barrel
                     domain; pfam11557"
                     /db_xref="CDD:371601"
ORIGIN      
        1 msaasqaetl ndlivkefey nfalsvvltd tdvftfgfhd fdpnqyfnls nedigtadsl
       61 dlrkeikeft lpysfdlaen etekltyrfn grfyllgidq dvyfneepip drskeqfigg
      121 ynefevekql tehfslsgal gahlihyktd ytyrsdaita lqpildgali ntsawallgq
      181 lnaklkyleq eswgkwylwt sphyfygtgw geanngnvgk pegwywvngv kvfydvahig
      241 stvqsfytsf sridiggdts dplnttnyye gsigwlmtpp fesdwidnig igltinygsd
      301 lkggslvlff nqd
//
LOCUS       WP_257976787             721 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257976787
VERSION     WP_257976787.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 721)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..721
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=78117
     Region          <27..76
                     /region_name="Cornifin"
                     /note="Cornifin (SPRR) family; pfam02389"
                     /db_xref="CDD:280537"
     Region          <57..310
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          342..416
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); pfam02368"
                     /db_xref="CDD:396788"
     Region          <611..>675
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllvtslfg cnsdsgssts qppmslpeev lpdepeieap ipelpvpefp dvskpevpet
       61 pevtppepsd pvipeppvpd kvvsrialnq srvslaegel aqvkvigfyn ddtqddltsq
      121 vvwnvenadi vnidergvit avktgvsvir adldefssem tvqvvdaklt niyfdlphka
      181 iakglsfqak aygeytdkqt rdishlvewd stdcsvvmpg ingiftaqde gdadiyaeld
      241 gltsthgsit vtpavlvsmd isstalempl gthkslvvmg tlsdgeqvdl trgitwhvdn
      301 dvveivdnvv kakhkgtalv taaldgvqse piqvqvtdai ltnievttna ssvakgnstq
      361 lsaqgvysde srvelteqva wwvdnqdvlq legarvkgla vgqamiyatk daitsaplqi
      421 qvtnavleki hvhpseitle eknvqrfyay geysdettqd vthrvtwrss nkavldliag
      481 glsnsaqlgs viisaslgel kgtsevkvve aeekesaisi cpqprsgegs veaclmvasd
      541 edgrlftapp svklmnklgy elvkplsyda tkpktyvgik tedgtrgpvg dfamfnqygr
      601 dragltsqya nwchdlsvrn fagrdnwrra trnelfslyr asrgsvwdgt esiyeedkdg
      661 ggfgwpanse ywstslmdlp hhegvvydii nlhrgraqlv mdardpayas cvsdapgvpl
      721 k
//
LOCUS       WP_257976811             128 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1214 domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257976811
VERSION     WP_257976811.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018452.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06742.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..128
                     /product="DUF1214 domain-containing protein"
                     /calculated_mol_wt=14163
     Region          <3..128
                     /region_name="COG5361"
                     /note="Uncharacterized conserved protein [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:444136"
ORIGIN      
        1 mnagskypft vrdskgdiln gshqyklhlp anppaklfwa vtlynvvdgt mpetsqllps
       61 kngfdniekn tdgsidlyfg pqlpngapes nyiktipgrd fltairlygt gieffdqtwk
      121 pddvlkik
//
LOCUS       WP_257976843             396 aa            linear   BCT 02-MAR-2025
DEFINITION  Tn7-like element transposition protein TnsE [Vibrio
            parahaemolyticus].
ACCESSION   WP_257976843
VERSION     WP_257976843.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 396)
  AUTHORS   Shi,Q., Straus,M.R., Caron,J.J., Wang,H., Chung,Y.S., Guarne,A. and
            Peters,J.E.
  TITLE     Conformational toggling controls target site choice for the
            heteromeric transposase element Tn7
  JOURNAL   Nucleic Acids Res 43 (22), 10734-10745 (2015)
   PUBMED   26384427
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037363.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18623.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..396
                     /product="Tn7-like element transposition protein TnsE"
                     /calculated_mol_wt=44662
     Region          246..392
                     /region_name="TnsE_C"
                     /note="TnsE C-terminal domain; pfam18623"
                     /db_xref="CDD:436628"
ORIGIN      
        1 mssrlltdfk vevntkedya nievlqtsnf ppsafndsat ramlswllid snakcsfesi
       61 fryfnveker dvsagykrwl fhfdppqmsg wsfsydgrld tsgryflvek itdieisaqm
      121 psrvyfhnps fthpdegqep ttggkcpepy erpddhiidd dreasdanha fllgentcsv
      181 rfknrfstsk attskrshrp drskdvakka gdkvstnepg sngeipcadm gggiqdctdr
      241 seeyasrfta fnmmvqmlee kyactivdsy theldqvgrs kchlidsgak rtircvvver
      301 sghvnyllei dvtglnkwis tkcvrqndts nwkeqfsrik kgvvtkslgw ptqemdamfg
      361 lkkhigishp ksveghptgi ptesildwag rvaekl
//
LOCUS       WP_257976884             283 aa            linear   BCT 02-MAR-2025
DEFINITION  zincin-like metallopeptidase domain-containing protein, partial
            [Vibrio parahaemolyticus].
ACCESSION   WP_257976884
VERSION     WP_257976884.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 283)
  AUTHORS   Iyer,L.M., Burroughs,A.M., Anand,S., de Souza,R.F. and Aravind,L.
  TITLE     Polyvalent Proteins, a Pervasive Theme in the Intergenomic
            Biological Conflicts of Bacteriophages and Conjugative Elements
  JOURNAL   J Bacteriol 199 (15), e00245-17 (2017)
   PUBMED   28559295
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037521.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18818.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..283
                     /product="zincin-like metallopeptidase domain-containing
                     protein"
     Region          <1..92
                     /region_name="ArdC"
                     /note="Antirestriction protein ArdC [Replication,
                     recombination and repair]; COG4227"
                     /db_xref="CDD:443371"
ORIGIN      
        1 elghwtghsd rldrdlsgrf gsesyakeel raeiasmlia qdtgvpneph nnaayvkswv
       61 kvlkddpaei araardaeli skyvmdldkt lehdlakenv qeaveaqlda ltsqtmvysl
      121 nketetfhat fiqdtglged yqdihngvfl tgsddneats rlltalsdst vihsmsdpks
      181 lietaleeal ddkmllvfgn ddtkrelknl apkvhvmtpk diafgakdfe saikdkgieh
      241 tkrlisqtqy gmqnklerhl ahtkeqektn trsveqtanl eid
//
LOCUS       WP_257976903             584 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257976903
VERSION     WP_257976903.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 584)
  AUTHORS   Clarke,T.A., Edwards,M.J., Gates,A.J., Hall,A., White,G.F.,
            Bradley,J., Reardon,C.L., Shi,L., Beliaev,A.S., Marshall,M.J.,
            Wang,Z., Watmough,N.J., Fredrickson,J.K., Zachara,J.M., Butt,J.N.
            and Richardson,D.J.
  TITLE     Structure of a bacterial cell surface decaheme electron conduit
  JOURNAL   Proc Natl Acad Sci U S A 108 (23), 9384-9389 (2011)
   PUBMED   21606337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037016.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17963.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..584
                     /product="Ig-like domain-containing protein"
     Region          40..271
                     /region_name="Peptidase_M11"
                     /note="Gametolysin peptidase M11; cl21618"
                     /db_xref="CDD:354892"
     Region          337..>528
                     /region_name="COG1470"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:441079"
     Region          483..556
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
ORIGIN      
        1 ffllvlflfl qniqyakaag ssigqqdtlv mllnfkenpn dqpitseeah alvfgevndf
       61 yqensygktw lsgqvagwyt lpvsnqvcdy psvqaeadkm aradgvvled yqriiyimtq
      121 sgcagggsat tgktfpsray idgtlsarvi ahefghnlgl shakaldcgd asvssncsvi
      181 eygdsydvmg tpdmgyinty ykermgwlnd aespniltat qdglyeiaey etqditqnia
      241 lkiprgvnpn tglkewfyve yrqamgydqf lddrsymlfr gdvtdgvivr lveegaeesy
      301 ilhmkpnsdy sqvygrkdwk dtalpvgdsf tdpvsgltin lasaangfag vnvsfggsvt
      361 psvcemsaps vsvkatsdtq vnagdtveyq ltvtntandv cgtirfdvsa qvesgwqass
      421 qsislasges svatiavtsa lsatsgdypv tfnvvntkde aynvatqaty avaeqqtgsg
      481 dvvavddnvq mskvstvsin vlgndiiadg vsveisamsa pskgtvklls dgsiqytpak
      541 rfknqdsfsy titsgnvtst amvtvalqss pdsggsspgk gknk
//
LOCUS       WP_257976901             506 aa            linear   BCT 02-MAR-2025
DEFINITION  PAAR-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257976901
VERSION     WP_257976901.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 506)
  AUTHORS   Santos,M.N.M., Cho,S.T., Wu,C.F., Chang,C.J., Kuo,C.H. and Lai,E.M.
  TITLE     Redundancy and Specificity of Type VI Secretion vgrG Loci in
            Antibacterial Activity of Agrobacterium tumefaciens 1D1609 Strain
  JOURNAL   Front Microbiol 10, 3004 (2020)
   PUBMED   31993035
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 506)
  AUTHORS   Pissaridou,P., Allsopp,L.P., Wettstadt,S., Howard,S.A.,
            Mavridou,D.A.I. and Filloux,A.
  TITLE     The Pseudomonas aeruginosa T6SS-VgrG1b spike is topped by a PAAR
            protein eliciting DNA damage to bacterial competitors
  JOURNAL   Proc Natl Acad Sci U S A 115 (49), 12519-12524 (2018)
   PUBMED   30455305
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025047.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13665.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>506
                     /product="PAAR-like domain-containing protein"
     Region          22..128
                     /region_name="Tox-PAAR-like"
                     /note="Toxin PAAR-like domain; pfam13665"
                     /db_xref="CDD:433390"
     Region          <123..203
                     /region_name="COG4253"
                     /note="Uncharacterized conserved protein, DUF2345 family
                     [Function unknown]"
                     /db_xref="CDD:443395"
     Region          253..336
                     /region_name="FIX_Ntox15_NUC_DUF4112_RhsA-like"
                     /note="Found in type sIX effector (FIX) domain of unknown
                     function co-occurring with Ntox15, endonuclease, or RHS
                     repeat domain; cd20746"
                     /db_xref="CDD:410944"
ORIGIN      
        1 mgvtvgangl sivhkgsgge anatlpdvcl tkvgkpivpi pygnnaksad laggtttism
       61 dggnsvaikg stfskstgda ggdkkgvasg tieaeakfis asptvkfegk gvcrlsdqmt
      121 mnkantmclg gaqnpsvsvt eeqegtytvd lylsysdgep vqgatytltd qsgavfegtl
      181 dnngkasvgg vapgefaiey gedsrdfmpn vptktnpnfn psanaqliie etkkgevgfw
      241 enawtrmsga aswiwgvilg dfnddasveq iiantaltmi pvvdqaadir dlsanimtll
      301 seeerdkpen wlalsltlvg cvptfgsavk gtckvalkgg kgtskdtlla vlrgmgkgdp
      361 ekflrtldwm dyakqtsqiv sdvlkpciev atelasyanr mgadelgayf lkladevkii
      421 dkmvpdklke amgefdklfa rilgkgekty pakvkhntge saqsgrkndk tqekrqegvq
      481 rcqcckrlit knmkhcvvsk nkgakr
//
LOCUS       WP_257976898              39 aa            linear   BCT 02-MAR-2025
DEFINITION  ProQ/FINO family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257976898
VERSION     WP_257976898.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 39)
  AUTHORS   Chaulk,S.G., Smith Frieday,M.N., Arthur,D.C., Culham,D.E.,
            Edwards,R.A., Soo,P., Frost,L.S., Keates,R.A., Glover,J.N. and
            Wood,J.M.
  TITLE     ProQ is an RNA chaperone that controls ProP levels in Escherichia
            coli
  JOURNAL   Biochemistry 50 (15), 3095-3106 (2011)
   PUBMED   21381725
REFERENCE   2  (residues 1 to 39)
  AUTHORS   Ghetu,A.F., Gubbins,M.J., Frost,L.S. and Glover,J.N.
  TITLE     Crystal structure of the bacterial conjugation repressor finO
  JOURNAL   Nat Struct Biol 7 (7), 565-569 (2000)
   PUBMED   10876242
REFERENCE   3  (residues 1 to 39)
  AUTHORS   Kunte,H.J., Crane,R.A., Culham,D.E., Richmond,D. and Wood,J.M.
  TITLE     Protein ProQ influences osmotic activation of compatible solute
            transporter ProP in Escherichia coli K-12
  JOURNAL   J Bacteriol 181 (5), 1537-1543 (1999)
   PUBMED   10049386
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016255.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04352.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..39
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>39
                     /product="ProQ/FINO family protein"
     Region          1..>39
                     /region_name="FinO_conjug_rep"
                     /note="FinO bacterial conjugation repressor domain; the
                     basic protein FinO is part of the the two component FinOP
                     system which is responsible for repressing bacterial
                     conjugation; the FinOP system represses the transfer (tra)
                     operon of the F-plasmid which...; cl15270"
                     /db_xref="CDD:472793"
ORIGIN      
        1 mteklknske viayiaecfp kcftlegeak plkigifqd
//
LOCUS       WP_257976932             216 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257976932
VERSION     WP_257976932.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>216
                     /product="DUF6531 domain-containing protein"
     Region          152..215
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
ORIGIN      
        1 mipqfviplt nclgqsfhfs sqpipkgehk kfdseqsaka flddfvplss srveelyhll
       61 gqfppnvpde eltpelyapv fakalvngsl yvasfpktkk natisseptp vpkqvkaksk
      121 qnkahtsskt qaknsasakp lqtgsechek agdpvslvtg eeiltlndve lpngfvwsrt
      181 yrsskasrnq glgygwrhaf qfelkevtde khnvts
//
LOCUS       WP_257976945             128 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257976945
VERSION     WP_257976945.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024991.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13604.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>128
                     /product="AAA family ATPase"
     Region          5..128
                     /region_name="DEXSc_RecD-like"
                     /note="DEXS-box helicase domain of RecD and similar
                     proteins; cd17933"
                     /db_xref="CDD:350691"
     Site            order(13..20,80,111)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350691"
ORIGIN      
        1 mgmtngvfil aggagtgktt vlktlfkaln nigykvypla lagraaecir eatgylsqti
       61 hsailtggik lgvksvvvid easmvdipll frlmrsvpen tqfifvgdpf qlapigygla
      121 lhdfikan
//
LOCUS       WP_257976949              90 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257976949
VERSION     WP_257976949.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 90)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 90)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>90
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          1..>90
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
ORIGIN      
        1 mmrclillci ntggqrpyei aaskwtainw dertllitpd lsknkrshlv pltesamsil
       61 erlresnsas pfifphhkdd ndhvrldsls
//
LOCUS       WP_257976965             528 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257976965
VERSION     WP_257976965.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>528
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          248..338
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          340..430
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          425..520
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq prpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqas ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnaendvit teedtavtid vlvndsdveg dalsiqsasv pseqgsvdiv
      301 dgklvftpae nfngeatity ivtdgdltde akvtvtvtpv ndspvavddt tsiqedtavt
      361 idvltndtdv dgdklsiesa svpkeqgtve vvdgklvftp aenfngdaei tytvtdgqlt
      421 deakvtvtvn pvndaptikv daveslteda vntdtvvatl tvrdtdtped qltvslenns
      481 nghfvlvgne vkltqagvda vnndelnlkd ltisasvsdg vnptasds
//
LOCUS       WP_257976438             157 aa            linear   BCT 02-MAR-2025
DEFINITION  tRNA-dependent cyclodipeptide synthase [Staphylococcus
            pseudintermedius].
ACCESSION   WP_257976438
VERSION     WP_257976438.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus intermedius
            group.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Sauguet,L., Moutiez,M., Li,Y., Belin,P., Seguin,J., Le Du,M.H.,
            Thai,R., Masson,C., Fonvielle,M., Pernodet,J.L., Charbonnier,J.B.
            and Gondry,M.
  TITLE     Cyclodipeptide synthases, a family of class-I aminoacyl-tRNA
            synthetase-like enzymes involved in non-ribosomal peptide synthesis
  JOURNAL   Nucleic Acids Res 39 (10), 4475-4489 (2011)
   PUBMED   21296757
REFERENCE   2  (residues 1 to 157)
  AUTHORS   Bonnefond,L., Arai,T., Sakaguchi,Y., Suzuki,T., Ishitani,R. and
            Nureki,O.
  TITLE     Structural basis for nonribosomal peptide synthesis by an
            aminoacyl-tRNA synthetase paralog
  JOURNAL   Proc Natl Acad Sci U S A 108 (10), 3912-3917 (2011)
   PUBMED   21325056
REFERENCE   3  (residues 1 to 157)
  AUTHORS   Vetting,M.W., Hegde,S.S. and Blanchard,J.S.
  TITLE     The structure and mechanism of the Mycobacterium tuberculosis
            cyclodityrosine synthetase
  JOURNAL   Nat Chem Biol 6 (11), 797-799 (2010)
   PUBMED   20852636
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028025.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16715.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Staphylococcus pseudintermedius"
                     /db_xref="taxon:283734"
     Protein         1..157
                     /product="tRNA-dependent cyclodipeptide synthase"
                     /GO_function="GO:0016755 - aminoacyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=18638
     Region          4..>150
                     /region_name="CDPS"
                     /note="Cyclodipeptide synthase; cl22834"
                     /db_xref="CDD:451425"
ORIGIN      
        1 mqqfkvdflt enckkiyqrk khvilgispf tskynetyir kliqwantnf kdfsillage
       61 esknlleclg ysttkanrkv rkevnrqirf cenellncnr tindrifrfl dfkqntyyvn
      121 myqkieglfn tddsfkkccl nmslqalqsk kiisiqq
//
LOCUS       WP_257977006             148 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257977006
VERSION     WP_257977006.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 148)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>148
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          7..>80
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 lsdcisgkfk itmpnsiass ifgsilrklq erypavifei sssnkvenll esnvdiairl
       61 ndvvddnlia hkvgnyndvl isnnsnekss tlliyknhsn keeirksycd vievdntsil
      121 lnfveqgvgl gvipnyllkg sshqellk
//
LOCUS       WP_257977051             146 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257977051
VERSION     WP_257977051.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 146)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>146
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
     Region          1..>145
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 manqtiqssa laddeidlgk lfgilidakw fiisitlffa tlgiavalls tpiykadali
       61 qiekkssggi samvgdmgel fsaessatte ieiiksrmil gdtvdkfnlt tiatpdylpf
      121 vgkglaring tqnyislttf evprta
//
LOCUS       WP_257977101            1645 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257977101
VERSION     WP_257977101.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 1645)
  AUTHORS   Clarke,T.A., Edwards,M.J., Gates,A.J., Hall,A., White,G.F.,
            Bradley,J., Reardon,C.L., Shi,L., Beliaev,A.S., Marshall,M.J.,
            Wang,Z., Watmough,N.J., Fredrickson,J.K., Zachara,J.M., Butt,J.N.
            and Richardson,D.J.
  TITLE     Structure of a bacterial cell surface decaheme electron conduit
  JOURNAL   Proc Natl Acad Sci U S A 108 (23), 9384-9389 (2011)
   PUBMED   21606337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037016.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17963.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1645
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..1645
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=175437
     Region          86..177
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          169..252
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
     Region          697..804
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          1159..>1282
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cd00198"
                     /db_xref="CDD:238119"
     Site            order(1166,1244,1273)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     Region          <1497..>1567
                     /region_name="Peptidase_M10_C"
                     /note="Peptidase M10 serralysin C terminal; cl23859"
                     /db_xref="CDD:451582"
ORIGIN      
        1 mntdtvvatl tvrdtdtsed qltvslenns ngyfvlvgne vkltqagvda vnndelnlkd
       61 maisasvsdg vnptandsds lvvnrvndap tvenaiadqe laedfasyti dlndafkdsd
      121 salnfsvsgn snvlvsieng iatisptadw ngsetltfta tdpsgesisq tvnftvepva
      181 divadkatvv edtptiikvl gndtfegkdk vvsldadngp kngtvivnnd gtvtytpddn
      241 yvgkdtftyv vtsggvsest tvtvnvtpvn dkpesedfth vaddqlthvv fdtdtkplgs
      301 gdskdhiadv eddlkgndlh vritelptsg tlffkdsdge lheikevsdt lydkdslyye
      361 adnvgfllgi kdrpntpngs estsdfnnwg lsedggpshs rtehlangas itissdsgel
      421 aqynrqvshi gngiadndgq giekgetiti dlsnnpvgsv nlgldglggl fdygddnaal
      481 itvtyldsnn vqqtqtfefl kpegnfmlfq etsvgygkdl alpegsvitq ldfstknegn
      541 welryvegvp aedsfgyvav dsesgvsdps tvnivnemld gnvaengpav qsitgvtvve
      601 gddvtfsvsl nnatdqtvky qvdfsaegss tssqdidlsn atftngvkyl ggylivpagv
      661 ngfditipsi ddqlvestes lvikvgdvsg vgyiddndvp ptvqsneisg ledeaivitl
      721 ehlgvvdsev svefdtsaln gslqvkgsdg wevvsgsvla sdiengfvry vpaehesgad
      781 vfdkdgvgng ldtyeqihft vsdgnssasg tlsidiepva dpikidltfg pvtsvpvtlg
      841 gswstdeelk dlleasnlpg ldfehvvtqa fnnghagndl mlsgdtespl sfvgdqqaga
      901 nvdaqgsdif vtgggndsiy ggigslddqa etdtvvysgk lsdydfsyyp asdhsevpyw
      961 ivedsrfidt kdvvssthke sgdhlyeieq lifqdaiikl dnntgeyvvl teqqvsfeln
     1021 ldlidvdgse sfindsvtlt gipseltlev ngktvtensd gsytvdlsse pnqtshqlsg
     1081 titvpadyng sldfdvtata gsvevnnntq mgadtasvsv rdyefvsgth gdnnivgsdd
     1141 ndvivgdvqg lqivegqdyn iafmldtsgs mgydvgravt elktvlntli esasgphsgk
     1201 vnvllttfst eskqvleldl ssdnaksqve sildaivklg dgntnyeagf qsalnwfena
     1261 dsgatnlsyf isdgrpnqat dnnvnwyssk esvvlgvseq qlvtladvlp sdyrfgdtvt
     1321 ynnktvidfr gtvyslstge kmgrmlnsye yddfgnnvle qannaysala efsevrsigi
     1381 gghlnedslk hfdsdgvvrt nidvnqlaev ilgkevslmq gkdeissldg ndiifgdair
     1441 fdingeqgvs alqnyvasql gkdvalvtke evhhyitenq aefeqsryyd qadtiyggag
     1501 ndilfgqggn dklfggadnd iligglgsdi ltggdgedif kwidvanerd tvtdfsssed
     1561 sldfsdlfdd lskdevgdll sdlqsgshtg daggyhievs qdgsvdtnls itkgsstldi
     1621 hfnsasvddi tqhliaslds qykdm
//
LOCUS       WP_257977120             591 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257977120
VERSION     WP_257977120.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 591)
  AUTHORS   Clarke,T.A., Edwards,M.J., Gates,A.J., Hall,A., White,G.F.,
            Bradley,J., Reardon,C.L., Shi,L., Beliaev,A.S., Marshall,M.J.,
            Wang,Z., Watmough,N.J., Fredrickson,J.K., Zachara,J.M., Butt,J.N.
            and Richardson,D.J.
  TITLE     Structure of a bacterial cell surface decaheme electron conduit
  JOURNAL   Proc Natl Acad Sci U S A 108 (23), 9384-9389 (2011)
   PUBMED   21606337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037016.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17963.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..591
                     /product="Ig-like domain-containing protein"
     Region          47..278
                     /region_name="Peptidase_M11"
                     /note="Gametolysin peptidase M11; cl21618"
                     /db_xref="CDD:354892"
     Region          328..>535
                     /region_name="COG1470"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:441079"
     Region          490..563
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
ORIGIN      
        1 halnkgiffl lvlflflqni qyakaagssi gqqdtlvmll nfkenpndrp itseeahalv
       61 fgevndfyqe nsygktwlsg qvvgwytlsv snqvcdypsv qaeadkmara dgvvledyqr
      121 iiyimtqsgc agggsattgk tfpsrayidg tlsarviahe fghnlglsha kaldcgdasv
      181 ssncsvieyg dsydvmgtpd mgyintyyke rmgwlndaes pniltatqdg lyeiaeyetq
      241 ditqnialki prgvnpntgl kewfyveyrq amgydqfldd rsymlfrgdv tdgvivrlve
      301 egaeesyilh mkpnsdysqv ygrkdwkdta lpvgdsftdp vsgltinlan aangfagvnv
      361 sfggsvtpsv cemsapsvsv katsdtqvna gdtveyqltv intandvcgt irfdvsaqve
      421 sgwqassqsi slasgessva tiavtsalsa tsgdypvtfn vvntkdeayn vatqatyava
      481 eqqtssgdvv avddnvqmsk vstvsinvlg ndiiadgvsv eisamsapsk gtvkllsdgs
      541 iqytpakrfk nqdsfsytit sgnvtstamv tvalqsspds ggsspgkgkn k
//
LOCUS       WP_257977142             413 aa            linear   BCT 02-MAR-2025
DEFINITION  type I restriction-modification enzyme R subunit C-terminal
            domain-containing protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257977142
VERSION     WP_257977142.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 413)
  AUTHORS   Makovets,S., Doronina,V.A. and Murray,N.E.
  TITLE     Regulation of endonuclease activity by proteolysis prevents
            breakage of unmodified bacterial chromosomes by type I restriction
            enzymes
  JOURNAL   Proc Natl Acad Sci U S A 96 (17), 9757-9762 (1999)
   PUBMED   10449767
REFERENCE   2  (residues 1 to 413)
  AUTHORS   Murray,N.E., Daniel,A.S., Cowan,G.M. and Sharp,P.M.
  TITLE     Conservation of motifs within the unusually variable polypeptide
            sequences of type I restriction and modification enzymes
  JOURNAL   Mol Microbiol 9 (1), 133-143 (1993)
   PUBMED   8412658
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020052.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08463.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..413
                     /product="type I restriction-modification enzyme R subunit
                     C-terminal domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
     Region          <1..409
                     /region_name="hsdR"
                     /note="type I restriction enzyme EcoKI subunit R;
                     Provisional; PRK11448"
                     /db_xref="CDD:236912"
ORIGIN      
        1 ynqaaveiik gdtdkveqki rqfknerypn iaitvdlltt gidvpavcnl vffrrvksri
       61 lyeqmigrat rrcddigktv friydpvdiy aalsevntmk plvkdpniti eqlvdeltdp
      121 etlekalnsp geqqgeshad vilsqlsqkl mrvlrkaekk sesnpklkek lfelqelwgv
      181 epkllhkhlh qfgpkqaaqf viqqsgllnq ltevslligs erkpiisnhe deiidrtqsy
      241 gahqrpedyl dgfnqyikeq lnqsvalavv vnkprdltre qlkevrllld gagyseaklq
      301 savrnqtnqd iaasiighir raafgeplvp feqrvaqaid riytnhqwtp aqrkwldrla
      361 kqlvhevivd refvnqrfad hggakqldki lvnqldtvls elseamwpvq sas
//
LOCUS       WP_257977158             138 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar phosphate nucleotidyltransferase, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257977158
VERSION     WP_257977158.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 138)
  AUTHORS   Jensen,S.O. and Reeves,P.R.
  TITLE     Domain organisation in phosphomannose isomerases (types I and II)
  JOURNAL   Biochim Biophys Acta 1382 (1), 5-7 (1998)
   PUBMED   9507048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012695.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00483.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..138
                     /product="sugar phosphate nucleotidyltransferase"
                     /GO_function="GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <1..137
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
ORIGIN      
        1 emraisieek piepksnyav tglyfydnrv vdiaktiqps hrgeleitsi nqayleqgkl
       61 tvdvlgrgfa wldtgthgsl leaahfveti ekrqgykvac leeiafrrgw ltrehiqaag
      121 kalskndygr yllellee
//
LOCUS       WP_257977165              44 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3693 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257977165
VERSION     WP_257977165.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023888.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12472.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..44
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>44
                     /product="DUF3693 domain-containing protein"
     Region          <2..>44
                     /region_name="DUF3693"
                     /note="Phage related protein; cl22943"
                     /db_xref="CDD:451460"
ORIGIN      
        1 mkavwkgisk kfdwlgisrf smvcaglalv iaspkeslyq calc
//
LOCUS       WP_257977199             950 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6701 domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257977199
VERSION     WP_257977199.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042738.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20419.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..950
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..950
                     /product="DUF6701 domain-containing protein"
     Region          455..944
                     /region_name="DUF6701"
                     /note="Family of unknown function (DUF6701); pfam20419"
                     /db_xref="CDD:466568"
ORIGIN      
        1 vlpagdsiis sspenevile ahqgivlegn nrigepnkri slrslsvelk vnneqassie
       61 dyqnkhtviy gdllsayptk lhnvlidgdi vltgstlhid gkyntiigki lthsttdifn
      121 anvcgtiesk ghqlhlktkh pfqqhfvvgd ivahssllid dmavygttes kgasaalngs
      181 fyakdtaiky fqtlnfnqgv rsqvcgeiqq tpgsshphsv tgkysqfcgv gqsrcdysss
      241 icpstatspp ecsmlppsnd dlgltvtpsd dmalmcgddl pqftaittnn devvsapvma
      301 mlsdpdlftl evvkgkptst enqfqsndng elvvrvvpnd idkialdany sltftmvgds
      361 akeqtvnfmf tpfmfeaysn errtlneirv iagkpenvht rllacastge pvvasnyngk
      421 pkvvhplikp lggsegdfsy saefkdglse hglitnesgl fevtlsdqfe ckgfsecpdd
      481 gavevtgkfn vysrpwtlai cenqntlpsg tseqgdkfia agehfsltvk pviwqkggsi
      541 sdpidssayc dalvttnfmh dgapaasvvl sseqhspldt anqtstllks nyaltqghqs
      601 aknhrfvfng lywaevgslk vkanlgstyf gmkvnegyrh igrfypkyfk vqsqdwtypk
      661 nqgfvymnqp fekvnydvva lnankedvkn yahfapslqq hfylgelggy qdrfvppapq
      721 kaewkrigda sigqfvieka stnatchnsp cwekdktkgh ypdgpfnrga nsksskiglv
      781 tthvvdevnf fdggeiltkq pdirfgrlnf kdvggnqgmk ikvpldvevw qdgrfvtnfd
      841 dnsttangay ytstpiwsna pvnnaqlsgv akmsvgrtnd iiasqidaar eqiqfslnld
      901 hsgnqlpwlk ydwetstpee enpptivtfg ihrgndriiy rgepnmlgln
//
LOCUS       WP_257977230              71 aa            linear   BCT 02-MAR-2025
DEFINITION  replication protein P, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257977230
VERSION     WP_257977230.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 71)
  AUTHORS   Mallory,J.B., Alfano,C. and McMacken,R.
  TITLE     Host virus interactions in the initiation of bacteriophage lambda
            DNA replication. Recruitment of Escherichia coli DnaB helicase by
            lambda P replication protein
  JOURNAL   J Biol Chem 265 (22), 13297-13307 (1990)
   PUBMED   2165499
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018671.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06992.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>71
                     /product="replication protein P"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
     Region          <1..>45
                     /region_name="Phage_lambda_P"
                     /note="Replication protein P; pfam06992"
                     /db_xref="CDD:462061"
ORIGIN      
        1 markddsdff psvgkfiswc gtnakvpdrd tafamleqyt rceyhaipre vkamfdligk
       61 stlrkgnvgd i
//
LOCUS       WP_257977257              76 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5675 family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257977257
VERSION     WP_257977257.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040141.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18925.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>76
                     /product="DUF5675 family protein"
     Region          <4..66
                     /region_name="DUF5675"
                     /note="Family of unknown function (DUF5675); pfam18925"
                     /db_xref="CDD:465915"
ORIGIN      
        1 mepfsgtkyk nvyelknvpg rtyvlihagn yhentegclm pgkswgvlkd shyyvsnskv
       61 alkeifseig kfksve
//
LOCUS       WP_257977332             751 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylneuraminate synthase family protein [Vibrio
            parahaemolyticus].
ACCESSION   WP_257977332
VERSION     WP_257977332.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 751)
  AUTHORS   Nakata,D., Close,B.E., Colley,K.J., Matsuda,T. and Kitajima,K.
  TITLE     Molecular cloning and expression of the mouse N-acetylneuraminic
            acid 9-phosphate synthase which does not have deaminoneuraminic
            acid (KDN) 9-phosphate synthase activity
  JOURNAL   Biochem Biophys Res Commun 273 (2), 642-648 (2000)
   PUBMED   10873658
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015087.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03102.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..751
                     /product="N-acetylneuraminate synthase family protein"
                     /GO_process="GO:0016051 - carbohydrate biosynthetic
                     process [Evidence IEA]"
                     /calculated_mol_wt=84396
     Region          4..119
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
     Site            order(7,9..11,33..35,97,110,112,114..115,118)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:341358"
     Region          7..71
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
     Site            order(33,45,50..51,54,76,97..99,114)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:341358"
     Region          76..118
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341358"
     Region          129..462
                     /region_name="SpsE"
                     /note="Sialic acid synthase SpsE, contains C-terminal SAF
                     domain [Cell wall/membrane/envelope biogenesis]; COG2089"
                     /db_xref="CDD:441692"
     Region          518..748
                     /region_name="AP2Ec"
                     /note="AP endonuclease family 2; These endonucleases play
                     a role in DNA repair. Cleave phosphodiester bonds at
                     apurinic or apyrimidinic sites; the alignment also
                     contains hexulose-6-phosphate isomerases, enzymes that
                     catalyze the epimerization of...; cl23721"
                     /db_xref="CDD:474032"
ORIGIN      
        1 mmyinrdies fkiahteslf salrklsekk tkilfvvdhn eavvgaladg dirrylvdks
       61 qdlsssvlca vnkdfqyiys dqpisngynl lstkiknvpi ldrsdlltgv igtdepviei
      121 agqrigdkep tfviaeignn hngsielake lvdlavdaga dcvkfqmrdm asmynnegdn
      181 ddasqdlgaq yvldllkrfq lsdnefieif eyckeknila lctpfdevsa dklerigvag
      241 fkvasadltn hrllkhlask rlplilstgm sveqeiisav ellekeaasf allhcnstyp
      301 apfkdvnlty lerlkslgrt vvgysgherg yaipiasipl gakivekhft idksmegndh
      361 kvsllpvefk emvkairave eslgspdisk titqgemmnr etlaksvvan tnikkgdlit
      421 eemlvikspg kglapyklte linrvavrdi skndflyqsd idgnviqaqk yklplkygip
      481 vryhdfatic eggdlemief hlsykdlnvd isdylsgqyd mdvaihapel fendhvldlc
      541 sadeeyrqqs ikhmqrvidm arnvkkffrn knervcivvn cggftsngfv alkdkdslya
      601 kvaeafgsld tegvelipqt mppfpwhfgg qqyhnlfvdq deiiefcnky nyricydllh
      661 talacnyykw dlysftesva kysahhhisd argadgeglq igegeinfql vfrsliqnap
      721 nstwipeiwq ghknngegfw kslkslervl q
//
LOCUS       WP_257977295             107 aa            linear   BCT 02-MAR-2025
DEFINITION  radical SAM protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257977295
VERSION     WP_257977295.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 107)
  AUTHORS   Benjdia,A., Leprince,J., Guillot,A., Vaudry,H., Rabot,S. and
            Berteau,O.
  TITLE     Anaerobic sulfatase-maturating enzymes: radical SAM enzymes able to
            catalyze in vitro sulfatase post-translational modification
  JOURNAL   J Am Chem Soc 129 (12), 3462-3463 (2007)
   PUBMED   17335281
REFERENCE   2  (residues 1 to 107)
  AUTHORS   Berteau,O., Guillot,A., Benjdia,A. and Rabot,S.
  TITLE     A new type of bacterial sulfatase reveals a novel maturation
            pathway in prokaryotes
  JOURNAL   J Biol Chem 281 (32), 22464-22470 (2006)
   PUBMED   16766528
REFERENCE   3  (residues 1 to 107)
  AUTHORS   Sofia,H.J., Chen,G., Hetzler,B.G., Reyes-Spindola,J.F. and
            Miller,N.E.
  TITLE     Radical SAM, a novel protein superfamily linking unresolved steps
            in familiar biosynthetic pathways with radical mechanisms:
            functional characterization using new analysis and information
            visualization methods
  JOURNAL   Nucleic Acids Res 29 (5), 1097-1106 (2001)
   PUBMED   11222759
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015983.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04055.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..107
                     /product="radical SAM protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0051539 - 4 iron, 4 sulfur cluster
                     binding [Evidence IEA]"
     Region          1..>107
                     /region_name="sulfatase_rSAM"
                     /note="anaerobic sulfatase-maturating enzyme; TIGR03942"
                     /db_xref="CDD:188457"
ORIGIN      
        1 gskcnydcqy cfylekdlll kskksmniet letyiknyis sqdtpivefa whggeptlig
       61 idffekavef qkqyangkli kntiqtngsk lnsdwcrffr ennflvg
//
LOCUS       WP_257977353             118 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6058 family natural product biosynthesis protein, partial
            [Vibrio parahaemolyticus].
ACCESSION   WP_257977353
VERSION     WP_257977353.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 118)
  AUTHORS   Qin,Z., Munnoch,J.T., Devine,R., Holmes,N.A., Seipke,R.F.,
            Wilkinson,K.A., Wilkinson,B. and Hutchings,M.I.
  TITLE     Formicamycins, antibacterial polyketides produced by Streptomyces
            formicae isolated from African Tetraponera plant-ants
  JOURNAL   Chem Sci 8 (4), 3218-3227 (2017)
   PUBMED   28507698
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039336.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19531.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..118
                     /product="DUF6058 family natural product biosynthesis
                     protein"
     Region          1..114
                     /region_name="DUF6058"
                     /note="Family of unknown function (DUF6058); pfam19531"
                     /db_xref="CDD:437363"
ORIGIN      
        1 fsnryrrals vlkgakcevd npglneiime dwehflqgty glctqtglse diaakgfave
       61 qikallerdv ldsneikrle yfvnlldnas ssfapherln ssrhrlvnev rrkyklqs
//
LOCUS       WP_257977396              40 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3693 domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257977396
VERSION     WP_257977396.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023888.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12472.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..40
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..40
                     /product="DUF3693 domain-containing protein"
                     /calculated_mol_wt=4286
     Region          <1..>37
                     /region_name="DUF3693"
                     /note="Phage related protein; cl22943"
                     /db_xref="CDD:451460"
ORIGIN      
        1 makkfdrlgl snisitcael alviasplep lhqyalcisw
//
LOCUS       WP_257977424             480 aa            linear   BCT 02-MAR-2025
DEFINITION  PAAR-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257977424
VERSION     WP_257977424.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 480)
  AUTHORS   Santos,M.N.M., Cho,S.T., Wu,C.F., Chang,C.J., Kuo,C.H. and Lai,E.M.
  TITLE     Redundancy and Specificity of Type VI Secretion vgrG Loci in
            Antibacterial Activity of Agrobacterium tumefaciens 1D1609 Strain
  JOURNAL   Front Microbiol 10, 3004 (2020)
   PUBMED   31993035
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 480)
  AUTHORS   Pissaridou,P., Allsopp,L.P., Wettstadt,S., Howard,S.A.,
            Mavridou,D.A.I. and Filloux,A.
  TITLE     The Pseudomonas aeruginosa T6SS-VgrG1b spike is topped by a PAAR
            protein eliciting DNA damage to bacterial competitors
  JOURNAL   Proc Natl Acad Sci U S A 115 (49), 12519-12524 (2018)
   PUBMED   30455305
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025047.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13665.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..480
                     /product="PAAR-like domain-containing protein"
                     /calculated_mol_wt=51136
     Region          6..101
                     /region_name="Tox-PAAR-like"
                     /note="Toxin PAAR-like domain; pfam13665"
                     /db_xref="CDD:433390"
     Region          <96..176
                     /region_name="COG4253"
                     /note="Uncharacterized conserved protein, DUF2345 family
                     [Function unknown]"
                     /db_xref="CDD:443395"
     Region          226..309
                     /region_name="FIX_Ntox15_NUC_DUF4112_RhsA-like"
                     /note="Found in type sIX effector (FIX) domain of unknown
                     function co-occurring with Ntox15, endonuclease, or RHS
                     repeat domain; cd20746"
                     /db_xref="CDD:410944"
ORIGIN      
        1 mffpkvgkpi vpipygnnak sadlaggttt ismdggnsva ikgstfskst gdaggdrkgv
       61 tsgtieaeak fisasptvkf egkgvcrlsd qmtmnkantm clggaqnpsv svtedqegty
      121 tvdlylsysd gepvqgatyt lkdqsgavfe gtldnngkas vggvapgefa ieygedsrdf
      181 mpnvptktnp nfnpsanaql iieetkkgev gfwenawtrm sgaaswiwgv ilgdfnddas
      241 veqiitntal tmipvvdqaa dirdlsanim tllseeerdk penwlalslt lvgcvptfgs
      301 avkgtckval kggkgtskdt llavlrgmgk gdpekflrtl dwmdyakqts qivsdvlkpc
      361 ievatelasy anrmgadelg ayflkladev kiidkmvpdk lkeamgefdk lfarilgkge
      421 ktypakvkhn tgesaqsgkn aakaneekdk kpvrckickr vagksegqcv dalrtkgktk
//
LOCUS       WP_257977428             721 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257977428
VERSION     WP_257977428.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 721)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..721
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=78141
     Region          <83..>172
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          342..416
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); pfam02368"
                     /db_xref="CDD:396788"
     Region          <611..>675
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllvsslfg cnsdsgsntn qppmslpeev lpdepeieap ipelpvpefp diskpevpet
       61 pevtppkpse pvipeppvpd kvvsrialnq srvslaegel aqvrvigfyn ddtqddltsq
      121 vvwnvenadi vnidergvit avktgvsvir adldefssem tvqvvdaklt niyfdlphka
      181 iakglsfqak aygeytdkqt rdishlvewd stdcsvvmpg ingiftaqde gdadiyaeld
      241 gltsthgsit vmpavlvsmd isstalempl gthkplvvmg tlsdgeqvdl trgitwhadn
      301 dvveivdnvv kakhkgtalv taaldgvqse piqvqvtdai ltnievttna ssvakgnstq
      361 lsaqgvysde srvelteqva wwvdnqdvlq legarvkgla vgqamvyatk daitsaplqi
      421 qvtnavleki hvhpseitle eknvqrfyay geysdettqd vthrvtwrss nkavldliag
      481 glsnsaqlgs vsisaslgel kgtsevkvve aeekesaisi cpqprsgegs aeaclmvasd
      541 edgrlftapp svklmnklgy elvkplsyda tkpktyagik tedgtrgpvg dfamfnqygr
      601 dragltsqya nwcydlsvrn fagrdnwrra trtelfslyr asrgsvwdgt esiyeedkdg
      661 ggfgwpanse ywstslmdlp hhegvvydii nlhrgraqlv mdardpayas cvsdapgvpl
      721 k
//
LOCUS       WP_257977429             129 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Vibrio parahaemolyticus].
ACCESSION   WP_257977429
VERSION     WP_257977429.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 129)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 129)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>129
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          7..>129
                     /region_name="VI_Rhs_Vgr"
                     /note="type VI secretion system Vgr family protein;
                     TIGR03361"
                     /db_xref="CDD:274542"
ORIGIN      
        1 mvndvnftfd vsgfsgafkv esfritetvs ssfemnltvl sdddaitfea lsrkmgvlsl
       61 fgqgvgtarq fngciselry lgtgrrfsry hitlvphlwf ltqrqdcrif qmqtapdiir
      121 qvfddagms
//
LOCUS       WP_257977481             101 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6037 family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257977481
VERSION     WP_257977481.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 101)
  AUTHORS   Lin,W.S., Cunneen,T. and Lee,C.Y.
  TITLE     Sequence analysis and molecular characterization of genes required
            for the biosynthesis of type 1 capsular polysaccharide in
            Staphylococcus aureus
  JOURNAL   J Bacteriol 176 (22), 7005-7016 (1994)
   PUBMED   7961465
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039331.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19503.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..101
                     /product="DUF6037 family protein"
     Region          <1..98
                     /region_name="DUF6037"
                     /note="Family of unknown function (DUF6037); pfam19503"
                     /db_xref="CDD:466110"
ORIGIN      
        1 eyfanfipdk idlsksnlfk tamnkslses dsedpnkifc ysvrrnpdgg trsifndnks
       61 rilrpklyek fegdytvsfc yspssereks daeiisnftk k
//
LOCUS       WP_257977483              86 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6037 family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257977483
VERSION     WP_257977483.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 86)
  AUTHORS   Lin,W.S., Cunneen,T. and Lee,C.Y.
  TITLE     Sequence analysis and molecular characterization of genes required
            for the biosynthesis of type 1 capsular polysaccharide in
            Staphylococcus aureus
  JOURNAL   J Bacteriol 176 (22), 7005-7016 (1994)
   PUBMED   7961465
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039331.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19503.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>86
                     /product="DUF6037 family protein"
     Region          2..>86
                     /region_name="DUF6037"
                     /note="Family of unknown function (DUF6037); pfam19503"
                     /db_xref="CDD:466110"
ORIGIN      
        1 mnlfqnfkll ksdmeekgwv ieafpfeykn idyvvlvkly qehevklnry allkveflka
       61 ndiddnlevd anvrelltda rtlrey
//
LOCUS       WP_257977520             721 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257977520
VERSION     WP_257977520.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 721)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..721
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=78046
     Region          <26..>80
                     /region_name="PRK15313"
                     /note="intestinal colonization autotransporter adhesin
                     MisL"
                     /db_xref="CDD:237940"
     Region          <57..353
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          342..416
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); cl02708"
                     /db_xref="CDD:445894"
     Region          426..506
                     /region_name="BID_2"
                     /note="Bacterial Ig-like domain 2; smart00635"
                     /db_xref="CDD:214752"
     Region          <611..>675
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllvtslfg cnsdsgssts qppmslpeev lpdepeieap ipelpvpefp diskpeapet
       61 pevtppepsd pvipeppvpd kvvsrialnq srvslaegel aqvkvigfyn dgtqddltsq
      121 vvwnvenadi vnidergvit alktgvsvir adldefssem tvqvvdaklt niyfdlphka
      181 iakglsfqak aygeytdkqt rdishlvewn stdcsvvmpg tngiftaqde gdadiyaeld
      241 gltsthgsit vtpavlvsmd isstalempl gthkplvvmg tlsdgeqvdl trgitwhvdn
      301 dvveivdnvv kakhkgtalv taasdgvqse piqvqvtdai ltnievttna ssvakgnstl
      361 lsaqgvysde srvelteqva wwvdnqdvlq legdrvkgla vgqamvyatk daitsaplqi
      421 qvtnavleki hvhpseitle eknvqrfyay geysdettqd vthrvtwrss nkavldliag
      481 glsnsaqlgs vtisaslgel kgisevkvve aeekesaisi cpqprsgegs aeaclmvasd
      541 edgrlftapp svklmnklgy elvkplsyda tkpktyvgik tedgtrgpeg dfamfnqygr
      601 dragltsqya nwchdlsvrn fagrdnwrra trnelfslyr asrgsvwdgt esiyeedkdg
      661 ggfgwpanse ywstslmdlp hhegvvydii nlhrgraqlv mdardpayas cvsdapgvpl
      721 k
//
LOCUS       WP_257977542             141 aa            linear   BCT 02-MAR-2025
DEFINITION  NYN domain-containing protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257977542
VERSION     WP_257977542.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   Anantharaman,V. and Aravind,L.
  TITLE     The NYN domains: novel predicted RNAses with a PIN domain-like fold
  JOURNAL   RNA Biol 3 (1), 18-27 (2006)
   PUBMED   17114934
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014045.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01936.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>141
                     /product="NYN domain-containing protein"
                     /GO_function="GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
     Region          8..132
                     /region_name="PIN_SF"
                     /note="PIN (PilT N terminus) domain: Superfamily; cl28905"
                     /db_xref="CDD:475124"
ORIGIN      
        1 mkkknfniav yidmeniaas dfqleevmns flsaddeync iftiksaygn qatakkslkt
       61 qilehnfnii dtpkigkekn radlllslda feslhldnpr vdrycfmttd sdftviadkl
      121 rkfgrevwlv ckksdkdrai i
//
LOCUS       WP_257977404             115 aa            linear   BCT 02-MAR-2025
DEFINITION  Tn7-like element transposition protein TnsE [Vibrio
            parahaemolyticus].
ACCESSION   WP_257977404
VERSION     WP_257977404.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 115)
  AUTHORS   Shi,Q., Straus,M.R., Caron,J.J., Wang,H., Chung,Y.S., Guarne,A. and
            Peters,J.E.
  TITLE     Conformational toggling controls target site choice for the
            heteromeric transposase element Tn7
  JOURNAL   Nucleic Acids Res 43 (22), 10734-10745 (2015)
   PUBMED   26384427
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037363.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18623.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..115
                     /product="Tn7-like element transposition protein TnsE"
                     /calculated_mol_wt=12811
     Region          <1..111
                     /region_name="TnsE_C"
                     /note="TnsE C-terminal domain; pfam18623"
                     /db_xref="CDD:436628"
ORIGIN      
        1 mslidsgakr tircvvvern gyvnylleid vtglnkwist kcvrqndtrn wedqfslikk
       61 gvvtkslgwp tqemdalfgf kkhigishpk sveghptgip tesildwagr vadkl
//
LOCUS       WP_257977555             324 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257977555
VERSION     WP_257977555.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 324)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>324
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <47..>249
                     /region_name="UvrD"
                     /note="Superfamily I DNA or RNA helicase [Replication,
                     recombination and repair]; COG0210"
                     /db_xref="CDD:439980"
ORIGIN      
        1 mvideherea klvelkiqyk kkgydqivts lncdyepvyk kgsveykivi dyhrylatng
       61 yidfdlilni syrllvanpq iarrlaklly hvlvdeyqdt samqyeilkl iishkqtklt
      121 migdkeqaiy tglgavvkgk kelehffdld kgieekrltg cfrssqkiin hylryqdagy
      181 evsalselke fpsvvhiesa vdktqlpeyv kgiiethlaq giegqdiavv cpswfdvmal
      241 stgidalaks fdidgflisp ipknqdnlwl plirlvllkv hmnnfvkrrr laielsdkly
      301 dagstqdrid prvllktvns isln
//
LOCUS       WP_257977558             108 aa            linear   BCT 02-MAR-2025
DEFINITION  PIN-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257977558
VERSION     WP_257977558.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 108)
  AUTHORS   Matelska,D., Steczkiewicz,K. and Ginalski,K.
  TITLE     Comprehensive classification of the PIN domain-like superfamily
  JOURNAL   Nucleic Acids Res 45 (12), 6995-7020 (2017)
   PUBMED   28575517
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037255.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18476.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>108
                     /product="PIN-like domain-containing protein"
     Region          25..>107
                     /region_name="PIN_8"
                     /note="PIN like domain; pfam18476"
                     /db_xref="CDD:436529"
ORIGIN      
        1 mkelfmgfsv psndeqhlvw nkctfvfdsn vllslhrynk hdrneilkti qsisdrvwit
       61 yqsaldyqrn vhlvkeyeen kysravkeik dikskisaal splrhdfk
//
LOCUS       WP_257977573             120 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar phosphate nucleotidyltransferase, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257977573
VERSION     WP_257977573.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 120)
  AUTHORS   Jensen,S.O. and Reeves,P.R.
  TITLE     Domain organisation in phosphomannose isomerases (types I and II)
  JOURNAL   Biochim Biophys Acta 1382 (1), 5-7 (1998)
   PUBMED   9507048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012695.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00483.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..120
                     /product="sugar phosphate nucleotidyltransferase"
                     /GO_function="GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <1..111
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
ORIGIN      
        1 dfqrllnfhi endadatmcv reydyqipyg vingegnqit smvekpvqrf fvnagiyvvs
       61 prviqsvekn qnidmptlle qhmkerqkvl mfpiheywld igrmddfkra qvdiltlrmd
//
LOCUS       WP_257977582             121 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257977582
VERSION     WP_257977582.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 121)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>121
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          1..>121
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 enapnielti edwneltpdr innqlvhfgi hyfplnlnkn lvqrkvgkdm svmvcrkdhp
       61 innesislet iasyplaihl qkhwnerqdk lsrlllshgi dfkvklktth inviinavet
      121 t
//
LOCUS       WP_257977583              78 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar phosphate nucleotidyltransferase, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257977583
VERSION     WP_257977583.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 78)
  AUTHORS   Jensen,S.O. and Reeves,P.R.
  TITLE     Domain organisation in phosphomannose isomerases (types I and II)
  JOURNAL   Biochim Biophys Acta 1382 (1), 5-7 (1998)
   PUBMED   9507048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012695.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00483.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>78
                     /product="sugar phosphate nucleotidyltransferase"
                     /GO_function="GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <1..>78
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
ORIGIN      
        1 isthympeqi hqhfgdgsnl gvnisyvhed splgtggalg llpedmprdl plimingdvl
       61 tkvdfqrlln fhiendad
//
LOCUS       WP_257977596             101 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257977596
VERSION     WP_257977596.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 101)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>101
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <1..101
                     /region_name="PRK11139"
                     /note="DNA-binding transcriptional activator GcvA;
                     Provisional"
                     /db_xref="CDD:182990"
ORIGIN      
        1 dlakhtllhd ssrrdwqayv kqlelqnvvn vqqgpifshs amviqaavhg qgialtnnvm
       61 akneidagrl vcpfsevlvs knafylvcqe sqadlgkiaa f
//
LOCUS       WP_257977601             147 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase-fold protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257977601
VERSION     WP_257977601.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 147)
  AUTHORS   Goins,C.M., Dajnowicz,S., Smith,M.D., Parks,J.M. and Ronning,D.R.
  TITLE     Mycolyltransferase from Mycobacterium tuberculosis in covalent
            complex with tetrahydrolipstatin provides insights into antigen 85
            catalysis
  JOURNAL   J Biol Chem 293 (10), 3651-3662 (2018)
   PUBMED   29352107
REFERENCE   2  (residues 1 to 147)
  AUTHORS   van Straaten,K.E., Gonzalez,C.F., Valladares,R.B., Xu,X.,
            Savchenko,A.V. and Sanders,D.A.
  TITLE     The structure of a putative S-formylglutathione hydrolase from
            Agrobacterium tumefaciens
  JOURNAL   Protein Sci 18 (10), 2196-2202 (2009)
   PUBMED   19653299
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012958.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00756.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>147
                     /product="alpha/beta hydrolase-fold protein"
     Region          1..>146
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 wlsgltcdeq nfitkagaqq faaqhgvilv apdtsprgak vaddeaydlg qgagfyinal
       61 qapwnshyqm ydyivselpt lveahlpasd krsifghsmg ghgalmiglr ntgrycslsa
      121 fapivapsqv pwgqkaftay lgderer
//
LOCUS       WP_257977501             326 aa            linear   BCT 02-MAR-2025
DEFINITION  VPA1269 family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257977501
VERSION     WP_257977501.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 326)
  AUTHORS   Hurley,C.C., Quirke,A., Reen,F.J. and Boyd,E.F.
  TITLE     Four genomic islands that mark post-1995 pandemic Vibrio
            parahaemolyticus isolates
  JOURNAL   BMC Genomics 7, 104 (2006)
   PUBMED   16672049
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024410.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13009.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>326
                     /product="VPA1269 family protein"
     Region          <5..109
                     /region_name="Integrase_2"
                     /note="Putative integrase; pfam13009"
                     /db_xref="CDD:432936"
     Region          <199..246
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cd00397"
                     /db_xref="CDD:271175"
     Site            order(209,212,236,245)
                     /site_type="active"
                     /db_xref="CDD:271175"
ORIGIN      
        1 dnlrwipnds phagywksry svnqdrgfvk rdtslvkeai qsknidengs pivrqaymyi
       61 ntnktadrsv afsevsgyti pwhhedaltv yarqldflnk yhnvespaam kdlerpqtil
      121 ggkptaavle itpsrfylfr cnlnsdeksr dfpptkllit kmwnqlmvei qrrldaegad
      181 fsvisqekle kfknnvgggn syisyltphc trvtgitrle efgvpihiis kliaghanvr
      241 ttyryvkydk syindritea qaqisskmel alteelktsd ierarqiayi pdiyltswga
      301 vqerswnsna lgicpnsgtl chegrd
//
LOCUS       WP_257977611              93 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein,
            partial [Vibrio parahaemolyticus].
ACCESSION   WP_257977611
VERSION     WP_257977611.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 93)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>93
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
     Region          <1..93
                     /region_name="mrcB"
                     /note="bifunctional glycosyl transferase/transpeptidase;
                     Reviewed; PRK09506"
                     /db_xref="CDD:236544"
ORIGIN      
        1 qsypsaerav psqaaylaly gmqqvvkqgt grvllskygk ynlagktgtt ndlrdswyag
       61 idgkevaivw vgrdnngptq ltgatgalkv yqr
//
LOCUS       WP_257977609              89 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257977609
VERSION     WP_257977609.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>89
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          1..>89
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mvlpiltsyg mhlqgasefl vgvaigiygl sqaifqvpfg lmsdkigrkp liiiglvifi
       61 lgsiiaalsd siwgiiigra lqgagaisa
//
LOCUS       WP_257977614              84 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase TerL endonuclease subunit, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257977614
VERSION     WP_257977614.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 84)
  AUTHORS   Xu,R.G., Jenkins,H.T., Chechik,M., Blagova,E.V., Lopatina,A.,
            Klimuk,E., Minakhin,L., Severinov,K., Greive,S.J. and Antson,A.A.
  TITLE     Viral genome packaging terminase cleaves DNA using the canonical
            RuvC-like two-metal catalysis mechanism
  JOURNAL   Nucleic Acids Res 45 (6), 3580-3590 (2017)
   PUBMED   28100693
REFERENCE   2  (residues 1 to 84)
  AUTHORS   Hilbert,B.J., Hayes,J.A., Stone,N.P., Duffy,C.M., Sankaran,B. and
            Kelch,B.A.
  TITLE     Structure and mechanism of the ATPase that powers viral genome
            packaging
  JOURNAL   Proc Natl Acad Sci U S A 112 (29), E3792-E3799 (2015)
   PUBMED   26150523
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042863.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20441.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>84
                     /product="terminase TerL endonuclease subunit"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
     Region          <7..84
                     /region_name="YmfN"
                     /note="Phage terminase-like protein, large subunit,
                     contains N-terminal HTH domain [Mobilome: prophages,
                     transposons]; COG4626"
                     /db_xref="CDD:443665"
ORIGIN      
        1 mfkksaenig lslplvefgq gykdmapald kleqmllnkq irhgnhpvmn mcaanaitvk
       61 daasnrkltk ekstgrmdgm vafa
//
LOCUS       WP_257977631              51 aa            linear   BCT 02-MAR-2025
DEFINITION  SMR family transporter, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257977631
VERSION     WP_257977631.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 51)
  AUTHORS   Yerushalmi,H., Lebendiker,M. and Schuldiner,S.
  TITLE     EmrE, an Escherichia coli 12-kDa multidrug transporter, exchanges
            toxic cations and H+ and is soluble in organic solvents
  JOURNAL   J Biol Chem 270 (12), 6856-6863 (1995)
   PUBMED   7896833
REFERENCE   2  (residues 1 to 51)
  AUTHORS   Parent,R. and Roy,P.H.
  TITLE     The chloramphenicol acetyltransferase gene of Tn2424: a new breed
            of cat
  JOURNAL   J Bacteriol 174 (9), 2891-2897 (1992)
   PUBMED   1314803
REFERENCE   3  (residues 1 to 51)
  AUTHORS   Sasatsu,M., Shima,K., Shibata,Y. and Kono,M.
  TITLE     Nucleotide sequence of a gene that encodes resistance to ethidium
            bromide from a transferable plasmid in Staphylococcus aureus
  JOURNAL   Nucleic Acids Res 17 (23), 10103 (1989)
   PUBMED   2602117
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013089.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00893.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..51
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>51
                     /product="SMR family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
     Region          1..>51
                     /region_name="EamA"
                     /note="EamA-like transporter family; cl23754"
                     /db_xref="CDD:474045"
ORIGIN      
        1 miywiflvla iitevigtls mkhasvsgdf tgmvvmyvmi atsyillava v
//
LOCUS       WP_257977634              70 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY-family carbohydrate kinase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257977634
VERSION     WP_257977634.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 70)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 70)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02782.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>70
                     /product="FGGY-family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <6..70
                     /region_name="XylB"
                     /note="Sugar (pentulose or hexulose) kinase [Carbohydrate
                     transport and metabolism]; COG1070"
                     /db_xref="CDD:440688"
ORIGIN      
        1 npqlsdvvri aggithspvw lqifadifqc qleivdvqeh gtlgaamtaa vmeghfpdvf
       61 aacevmvkva
//
LOCUS       WP_257977639              68 aa            linear   BCT 02-MAR-2025
DEFINITION  YchJ family metal-binding protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257977639
VERSION     WP_257977639.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 68)
  AUTHORS   Cranford-Smith,T., Jamshad,M., Jeeves,M., Chandler,R.A., Yule,J.,
            Robinson,A., Alam,F., Dunne,K.A., Aponte Angarita,E.H., Alanazi,M.,
            Carter,C., Henderson,I.R., Lovett,J.E., Winn,P., Knowles,T. and
            Huber,D.
  TITLE     Iron is a ligand of SecA-like metal-binding domains in vivo
  JOURNAL   J Biol Chem 295 (21), 7516-7528 (2020)
   PUBMED   32241912
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036804.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17775.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>68
                     /product="YchJ family metal-binding protein"
     Region          <1..>68
                     /region_name="PRK01617"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:234966"
ORIGIN      
        1 sayvhhnvdy lietwhpdch aeeyreelin sfiqtqwlgl cvisssyakn pdegyvefsa
       61 cfidekad
//
LOCUS       WP_257977694             265 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase TerL endonuclease subunit, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257977694
VERSION     WP_257977694.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 265)
  AUTHORS   Xu,R.G., Jenkins,H.T., Chechik,M., Blagova,E.V., Lopatina,A.,
            Klimuk,E., Minakhin,L., Severinov,K., Greive,S.J. and Antson,A.A.
  TITLE     Viral genome packaging terminase cleaves DNA using the canonical
            RuvC-like two-metal catalysis mechanism
  JOURNAL   Nucleic Acids Res 45 (6), 3580-3590 (2017)
   PUBMED   28100693
REFERENCE   2  (residues 1 to 265)
  AUTHORS   Hilbert,B.J., Hayes,J.A., Stone,N.P., Duffy,C.M., Sankaran,B. and
            Kelch,B.A.
  TITLE     Structure and mechanism of the ATPase that powers viral genome
            packaging
  JOURNAL   Proc Natl Acad Sci U S A 112 (29), E3792-E3799 (2015)
   PUBMED   26150523
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042863.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20441.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..265
                     /product="terminase TerL endonuclease subunit"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
     Region          <1..263
                     /region_name="YmfN"
                     /note="Phage terminase-like protein, large subunit,
                     contains N-terminal HTH domain [Mobilome: prophages,
                     transposons]; COG4626"
                     /db_xref="CDD:443665"
ORIGIN      
        1 airnpryani fktkhlniwv nssaaffnle hwkraedtel rignfievpa wfsldlaskl
       61 dvcsfvqlfa rweddgqrhy ycfsrhylpe etifdpdqkn aklyqrwvnt ewensdgsal
      121 kqtdgaevdf gevgdevltl senfmvrevp hdpwnsaqla qqlndeglta vkipqttahl
      181 spgmkeiesa lkagrfhhdg npvltwmmsn vvakedanen vfprkdkkdq kidgavalim
      241 avyramldeg erpsvyeded vmlfl
//
LOCUS       WP_257978013             353 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            gladioli].
ACCESSION   WP_257978013
VERSION     WP_257978013.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia gladioli
  ORGANISM  Burkholderia gladioli
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (residues 1 to 353)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Burkholderia gladioli"
                     /db_xref="taxon:28095"
     Protein         <1..>353
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          59..>353
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 kakaqglefa lvdlftrqsi anlaqaltld evsvaqeaaa lslsaadqar lpagiedayp
       61 ltylqrgmvy hnqqasedas iyhdvfsyrf gvpawdeakl rlaldamtrr hpvlrtsfdf
      121 drfdepmqlv haegrvplsv idlsglgeae qerviaefve aerktrvvle vapllrvfih
      181 vrgadeiqyt lsfhhaildg wsvaslntel faaylalldg daselelapl ahtprsaves
      241 ergalaseah refwrntlsg hsfsglppae pgagpdiarp elrvtvddsl raslqtvang
      301 lgvpmrsvll aahlrvlsml sgkldvttgl vsnvrqeqdd gekvlglfln tlp
//
LOCUS       WP_257978201             385 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Vibrio parahaemolyticus].
ACCESSION   WP_257978201
VERSION     WP_257978201.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 385)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 385)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..385
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=44047
     Region          <36..87
                     /region_name="Arm-DNA-bind_3"
                     /note="Arm DNA-binding domain; pfam13356"
                     /db_xref="CDD:433141"
     Region          97..373
                     /region_name="XerD"
                     /note="Site-specific recombinase XerD [Replication,
                     recombination and repair]; COG4974"
                     /db_xref="CDD:443999"
ORIGIN      
        1 msttpiemnq kvlnalprpa kgeqgveypw kknprlrvlv tatsmrwivr lgwkgkryye
       61 sfgtypemkf aefnqlayqf iadvqsgayq kgsrmtvqqf fddvvlpysr nhhrdsktfl
      121 srskrviaaf gkervtdvtr rdverflnsl tdlshasinr yhaflsklfs maveheiidk
      181 spvkgvkkrv ennakdrvls skeaesfcrh acadsnfiha yalmlslltg mrignvislt
      241 rsmladdlss allpmtksgk sqriyfsepa krlirkclkv sfndwvfpsl knqgehiayp
      301 racmeriqqa mkqegcldap ftihdlrrty atqmllatnd irlaqqslgh snvnvterya
      361 yyqnihlaqa sqqtvdamlp nlqid
//
LOCUS       WP_257978293             139 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Aeromonas caviae].
ACCESSION   WP_257978293
VERSION     WP_257978293.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas caviae
  ORGANISM  Aeromonas caviae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 139)
  AUTHORS   Davies,D.R., Mahnke Braam,L., Reznikoff,W.S. and Rayment,I.
  TITLE     The three-dimensional structure of a Tn5 transposase-related
            protein determined to 2.9-A resolution
  JOURNAL   J Biol Chem 274 (17), 11904-11913 (1999)
   PUBMED   10207011
REFERENCE   2  (residues 1 to 139)
  AUTHORS   DasSarma,S.
  TITLE     Identification and analysis of the gas vesicle gene cluster on an
            unstable plasmid of Halobacterium halobium
  JOURNAL   Experientia 49 (6-7), 482-486 (1993)
   PUBMED   8335077
REFERENCE   3  (residues 1 to 139)
  AUTHORS   Ferrante,A.A. and Lessie,T.G.
  TITLE     Nucleotide sequence of IS402 from Pseudomonas cepacia
  JOURNAL   Gene 102 (1), 143-144 (1991)
   PUBMED   1650732
REFERENCE   4  (residues 1 to 139)
  AUTHORS   De Meirsman,C., Van Soom,C., Verreth,C., Van Gool,A. and
            Vanderleyden,J.
  TITLE     Nucleotide sequence analysis of IS427 and its target sites in
            Agrobacterium tumefaciens T37
  JOURNAL   Plasmid 24 (3), 227-234 (1990)
   PUBMED   1963949
REFERENCE   5  (residues 1 to 139)
  AUTHORS   Sato,S., Nakada,Y. and Shiratsuchi,A.
  TITLE     IS421, a new insertion sequence in Escherichia coli
  JOURNAL   FEBS Lett 249 (1), 21-26 (1989)
   PUBMED   2542093
REFERENCE   6  (residues 1 to 139)
  AUTHORS   Kroger,M. and Hobom,G.
  TITLE     Structural analysis of insertion sequence IS5
  JOURNAL   Nature 297 (5862), 159-162 (1982)
   PUBMED   6281654
REFERENCE   7  (residues 1 to 139)
  AUTHORS   Klaer,R., Kuhn,S., Tillmann,E., Fritz,H.J. and Starlinger,P.
  TITLE     The sequence of IS4
  JOURNAL   Mol Gen Genet 181 (2), 169-175 (1981)
   PUBMED   6268937
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01609.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Aeromonas caviae"
                     /db_xref="taxon:648"
     Protein         <1..>139
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <7..139
                     /region_name="transpos_IS4_1"
                     /note="IS4 family transposase; NF033592"
                     /db_xref="CDD:468101"
ORIGIN      
        1 tstnrqtpyp mlrlvtlmnv rshvianaai spyrkgeipl asefihslpd ksvtlldkgf
       61 fgadlllriq aedtdrhwli perkglvyte lerygdgdrl lqmtvspqar kknpalpthw
      121 qvravtyeva gkektvfts
//
LOCUS       WP_257978312              70 aa            linear   BCT 02-MAR-2025
DEFINITION  rubredoxin, partial [Aeromonas caviae].
ACCESSION   WP_257978312
VERSION     WP_257978312.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas caviae
  ORGANISM  Aeromonas caviae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012522.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00301.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Aeromonas caviae"
                     /db_xref="taxon:648"
     Protein         <1..70
                     /product="rubredoxin"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
     Region          <1..69
                     /region_name="PRK05452"
                     /note="anaerobic nitric oxide reductase flavorubredoxin;
                     Provisional"
                     /db_xref="CDD:235475"
ORIGIN      
        1 pqatpaaaew dddqamlctv cqwvydpaqg epdqlvapgt pwaqvpesfl cpgcgigkev
       61 fepcaveacv
//
LOCUS       WP_257978303             103 aa            linear   BCT 02-MAR-2025
DEFINITION  glycyl radical enzyme domain-containing protein, partial [Aeromonas
            caviae].
ACCESSION   WP_257978303
VERSION     WP_257978303.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas caviae
  ORGANISM  Aeromonas caviae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022676.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11230.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Aeromonas caviae"
                     /db_xref="taxon:648"
     Protein         <1..>103
                     /product="glycyl radical enzyme domain-containing protein"
     Region          <1..>103
                     /region_name="DUF3029"
                     /note="Protein of unknown function (DUF3029); cl26132"
                     /db_xref="CDD:452584"
ORIGIN      
        1 tfdqrgfgiv scynalplgg gantlvrlsl kgvagqsagv edfmartlph yceqasrlie
       61 araaflhres gffdsflvke glldedrfvp mfgiygmaea vnl
//
LOCUS       WP_257978345             111 aa            linear   BCT 02-MAR-2025
DEFINITION  4Fe-4S binding protein, partial [Aeromonas caviae].
ACCESSION   WP_257978345
VERSION     WP_257978345.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas caviae
  ORGANISM  Aeromonas caviae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012267.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00037.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Aeromonas caviae"
                     /db_xref="taxon:648"
     Protein         <1..111
                     /product="4Fe-4S binding protein"
     Region          <1..108
                     /region_name="PRK12771"
                     /note="putative glutamate synthase (NADPH) small subunit;
                     Provisional"
                     /db_xref="CDD:237198"
ORIGIN      
        1 lvgpeqlqlw fqtqapassq pvkppsardd fgeiigglde taaryeaarc yscgncfecd
       61 gcygscpeqa itklgpglgy rvdaerctgc gachdqcpch aillrqpevs l
//
LOCUS       WP_257978375             365 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Aeromonas caviae].
ACCESSION   WP_257978375
VERSION     WP_257978375.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas caviae
  ORGANISM  Aeromonas caviae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 365)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Aeromonas caviae"
                     /db_xref="taxon:648"
     Protein         1..365
                     /product="AMP-binding protein"
                     /calculated_mol_wt=39748
     Region          <13..363
                     /region_name="PRK08162"
                     /note="acyl-CoA synthetase; Validated"
                     /db_xref="CDD:236169"
ORIGIN      
        1 mtrsakvged vnslnytsgt tgnpkgvvyh hrgahlnavn nalswelpkh pvylwtlpmf
       61 hcngwcfpwt laatagvsvc lrhvqaaaiy galrehkvsh fcaapivlnm lnnadpvlkq
      121 gldhpvkamt agaappatvi agmeamgiav thvygltety gpcvvcepqr hwqgqdattl
      181 srlkarqgva splqgemrvi npvsgepvpm dgktlgeivl rgnivmkgyl knpaaseeam
      241 aqgwfrsgdl avwhpdgyve ikdrskdiii sggenissle vedvlyrhpd veeaaviamp
      301 detwgevpca fvklkegrel tqaeligfcr eqmahfkapk riiftplpkt stgkvqkfml
      361 rkqla
//
LOCUS       WP_257978420             103 aa            linear   BCT 02-MAR-2025
DEFINITION  glycyl radical enzyme domain-containing protein, partial [Aeromonas
            caviae].
ACCESSION   WP_257978420
VERSION     WP_257978420.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas caviae
  ORGANISM  Aeromonas caviae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022676.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11230.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Aeromonas caviae"
                     /db_xref="taxon:648"
     Protein         <1..>103
                     /product="glycyl radical enzyme domain-containing protein"
     Region          <1..103
                     /region_name="DUF3029"
                     /note="Protein of unknown function (DUF3029); cl26132"
                     /db_xref="CDD:452584"
ORIGIN      
        1 vtpgvripyg qepdpashvl alaphhgyyh sgiseiltld ptirqnpqal lqlckgalai
       61 gmreftanva dsdlvrvtgy mirksdvarf aeegsrlqtt clg
//
LOCUS       WP_257978448              91 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar basal body L-ring protein FlgH, partial [Aeromonas
            salmonicida].
ACCESSION   WP_257978448
VERSION     WP_257978448.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014195.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02107.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         1..>91
                     /product="flagellar basal body L-ring protein FlgH"
                     /GO_component="GO:0009427 - bacterial-type flagellum basal
                     body, distal rod, L ring [Evidence IEA]"
                     /GO_function="GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA]"
                     /GO_process="GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
     Region          1..>91
                     /region_name="FlgH"
                     /note="Flagellar L-ring protein; cl19182"
                     /db_xref="CDD:450263"
ORIGIN      
        1 mktiwmlgll alggcsstln takpddpefa pvygesdpvs vrptgaifqp dqvngiysdi
       61 kahrvgdiit ielaestsas kkantqsgkd n
//
LOCUS       WP_257978412             795 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Aeromonas caviae].
ACCESSION   WP_257978412
VERSION     WP_257978412.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas caviae
  ORGANISM  Aeromonas caviae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 795)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 795)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 795)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 795)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 795)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 795)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 795)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 795)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 795)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Aeromonas caviae"
                     /db_xref="taxon:648"
     Protein         1..795
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=89938
     Region          1..291
                     /region_name="TauA"
                     /note="ABC-type nitrate/sulfonate/bicarbonate transport
                     system, periplasmic component [Inorganic ion transport and
                     metabolism]; COG0715"
                     /db_xref="CDD:440479"
     Region          245..>654
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
     Region          660..787
                     /region_name="COG2703"
                     /note="Hemerythrin [Signal transduction mechanisms]"
                     /db_xref="CDD:442023"
ORIGIN      
        1 miatlttapl radervilql swqhqfqfag yyaaiakgfy qeaglqvtlr eagpgtdvin
       61 evttgraqfg irgsdlllar aagrpvvvla amlqhsplml itlerpdiqt pgdlankrlm
      121 lepgsnellt ylhrytrsrq wetlpyergv qallrgqada isaysttepf tlqqqgipyr
      181 vfsprdigyd fygdnlftse sevinqqerv qrflqaslkg wryamdhpee minlilehyp
      241 sgagrealaf earetralmq pdiiepgymq qdrwqqiart yqeagmikav pnltpflyns
      301 tqaslrqqrq lldrsvaiam lisfsllall gvflhlylrl reeasdrqrl trelaqreqh
      361 yrfvaensgd viwtmdtdsl rfryispaia slsgyepael falslrqllp deswkqlrdg
      421 itasleawqr gdhgqtrcvi hsqlrhkhgh lvaietvttl hgsastrpda ilgvtrdvte
      481 rsareemmrr lafydpltgl anrrllqqrl ketleqapqq plalvfidld hfkpindtfg
      541 hetgdlllkl vaermgecvr eedlvarlgg defvimlhdt dasalavadk lhhclhhpfq
      601 leqqalrisg sigvalypah gtdpktlmhh adqamyqakh hgrgrvclfs tgqdplpgtl
      661 qwqpahacgh pridadhrql yllanrlleh mqdpgihpda lladmaqife marqhfllee
      721 qvlaqygyee laahrqehqh llkkagqlma aaqagtlgnd allnfiiqel vvghmsqadr
      781 ryfplmktcd areav
//
LOCUS       WP_257978450             399 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Aeromonas
            salmonicida].
ACCESSION   WP_257978450
VERSION     WP_257978450.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         1..>399
                     /product="ABC transporter substrate-binding protein"
     Region          49..>399
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mpstasagvs pvptlirtta ytaaitltlc wsqfgwgagl pedlkwesnn adpvyadpaa
       61 krggtfrgfv tsfpltlrkf gpdsngsfas yvresnlpll sthpvtgnpm pmlanawafg
      121 adhktlyfri npkarwsdgq pvtaddwvft lkmmrskein dpwynnyyst qiadvtrfdd
      181 htlsitsgse ksredllesl pftpepshai kltanwvkey nwkilpvtgp yqlgevkkgk
      241 svsfkrikdw wgdeeryfqh rfnpdrieik vlrdqniawq hflrgdldtf plvmpnwwhd
      301 ktktaefekg yierlwfynq tpqspmglyl ntadpllsel nvrlgiqhal nldkmlatll
      361 rgdyqrlnsy gsgqgaftnt elkarpfdpq larnyfaka
//
LOCUS       WP_257978460             529 aa            linear   BCT 02-MAR-2025
DEFINITION  efflux RND transporter permease subunit, partial [Aeromonas
            salmonicida].
ACCESSION   WP_257978460
VERSION     WP_257978460.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 529)
  AUTHORS   Murakami,S., Nakashima,R., Yamashita,E. and Yamaguchi,A.
  TITLE     Crystal structure of bacterial multidrug efflux transporter AcrB
  JOURNAL   Nature 419 (6907), 587-593 (2002)
   PUBMED   12374972
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00873.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         1..>529
                     /product="efflux RND transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          1..>527
                     /region_name="AcrB"
                     /note="Multidrug efflux pump subunit AcrB [Defense
                     mechanisms]; COG0841"
                     /db_xref="CDD:440603"
ORIGIN      
        1 mnlaktaier piwvavsvvl ifllgllsir glpvqlfpdi drphlnisvd wrsaspqeme
       61 seitdpieqe mqgvqglknl tsnsypgfte idmefalgtd mqraqldvis rlnrvsglpd
      121 kiggpyvnny ssndtltfff iqqlpgakga iddhqaliea rvkpelerip gvstvdiegi
      181 nerqiqirfd pyraaelgve ipvlasrett gwdvsagtld igrweyklrf agrydvatlg
      241 dkvvdwrdgl piylrdvaqi rlareenpvl riqngntaia aqifkesgan alaalegikl
      301 kveelnrevl epvglhmeqs fdaslyinra vgmvtanlgl gvllscailw vflrqlkatl
      361 miaiaipisi mltfcllkvm grtlniisla giafavgmvl daaivvlesi yrrhergdlg
      421 kaeaalegts rvwtalvast lttvaiflpv lllndvegql fadlaltiac avtvsmvvav
      481 tvlpavaarw mgreqlvdpy dglwrrttrh virwtgtapr rwtlivlmm
//
LOCUS       WP_257978467             319 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Aeromonas salmonicida].
ACCESSION   WP_257978467
VERSION     WP_257978467.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 319)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..319
                     /product="AMP-binding protein"
     Region          <4..304
                     /region_name="MenE/FadK"
                     /note="O-succinylbenzoic acid-CoA ligase MenE or related
                     acyl-CoA synthetase (AMP-forming) [Lipid transport and
                     metabolism]; COG0318"
                     /db_xref="CDD:440087"
ORIGIN      
        1 ditlfssgst gepkaipkaw pqleaelrvq malwgqalad trvlasvshq hiygllfril
       61 lplalgrpfd rrsidypeql avqtapwvli aspaflsrld paipaagcrl ivssggplqp
      121 rdahqarall gqlpveifgs setggigwrq rhqvqtpwtt lpgvevrvgs dqglllcspf
      181 laedgwlaca drilmtgagf ellgrqdrvi kleekrisld evearlqalp evelaavlpl
      241 hqgqrqilga vlvlsevgaa rwtelgqgrf llalrqqlrp rlepvalprs lrrvdqmpln
      301 aqgkrpwpql kelfdeplc
//
LOCUS       WP_257978487              86 aa            linear   BCT 02-MAR-2025
DEFINITION  integrase core domain-containing protein, partial [Aeromonas
            salmonicida].
ACCESSION   WP_257978487
VERSION     WP_257978487.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025063.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13683.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..86
                     /product="integrase core domain-containing protein"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <1..86
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 qycsglyqsl herygvrcsm tdgydcyqna laervngilk gelllqspqd laqaremvre
       61 avdiynverp hhalkyrtpd avhrgf
//
LOCUS       WP_257978489             383 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Aeromonas
            salmonicida].
ACCESSION   WP_257978489
VERSION     WP_257978489.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 383)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..383
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <7..381
                     /region_name="MenD"
                     /note="2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-
                     carboxylate synthase [Coenzyme transport and metabolism];
                     COG1165"
                     /db_xref="CDD:440779"
ORIGIN      
        1 gylaplgdwl hssepwspwq qneqicprqp dwaalqgkrg iivagriqdp aqaqvvaela
       61 erlgwpllad lqsqirfdar nlihmdlalq nscfvaelar aevllqfgar liskrlgqfi
      121 kqhpwqdywl vdpqparldp dyrlrrrlvc epavfaathk vstrhlpwhr laerqqsatr
      181 qirsacdrfs elgvchrlgn liqgqlfvgn smparlmdml geagkgpsrv mtnrgasgid
      241 gliataygfa qssdqpttll igdlsalhdl nslallgkss rplvvillnn dggsifrmlp
      301 vptgdrllet yyclphglhf ehaaamfglh yrapttlaef eqaytaalkk palekkvtli
      361 eikvpsseva edlkalgaai rgl
//
LOCUS       WP_257978504             208 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase, partial [Aeromonas salmonicida].
ACCESSION   WP_257978504
VERSION     WP_257978504.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 208)
  AUTHORS   Mande,S.S., Sarfaty,S., Allen,M.D., Perham,R.N. and Hol,W.G.
  TITLE     Protein-protein interactions in the pyruvate dehydrogenase
            multienzyme complex: dihydrolipoamide dehydrogenase complexed with
            the binding domain of dihydrolipoamide acetyltransferase
  JOURNAL   Structure 4 (3), 277-286 (1996)
   PUBMED   8805537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07992.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         1..>208
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
     Region          11..>208
                     /region_name="PRK04965"
                     /note="NADH:flavorubredoxin reductase NorW"
                     /db_xref="CDD:179902"
ORIGIN      
        1 mkaatlseag vsreilvigs gfaaqqlvks lrkldaeqpi rlitadsgde ynkpdlshvv
       61 srgctaaamt rlsgsdfaeq qriallphcp vlgidparri vmtgqgefay gqlvlatgas
      121 avrpdlpgse hlvtlnslqe yaaaegpiqq arrimvlgag ligcelamdm asydrevtlv
      181 dladsplsal lpavlsqplq qalrsqgv
//
LOCUS       WP_257978505              60 aa            linear   BCT 02-MAR-2025
DEFINITION  rubredoxin, partial [Aeromonas salmonicida].
ACCESSION   WP_257978505
VERSION     WP_257978505.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012522.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00301.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..60
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..60
                     /product="rubredoxin"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
     Region          <1..59
                     /region_name="PRK05452"
                     /note="anaerobic nitric oxide reductase flavorubredoxin;
                     Provisional"
                     /db_xref="CDD:235475"
ORIGIN      
        1 dddqpmlctv cqwiydpalg epdqlvapgt pwarvpesfl cpgcgigkev fepcaveacv
//
LOCUS       WP_257978539             174 aa            linear   BCT 02-MAR-2025
DEFINITION  CS1-pili formation C-terminal domain-containing protein, partial
            [Aeromonas salmonicida].
ACCESSION   WP_257978539
VERSION     WP_257978539.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 174)
  AUTHORS   Froehlich,B.J., Karakashian,A., Melsen,L.R., Wakefield,J.C. and
            Scott,J.R.
  TITLE     CooC and CooD are required for assembly of CS1 pili
  JOURNAL   Mol Microbiol 12 (3), 387-401 (1994)
   PUBMED   7915003
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027306.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15976.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         1..>174
                     /product="CS1-pili formation C-terminal domain-containing
                     protein"
     Region          <5..174
                     /region_name="PRK15310"
                     /note="fimbrial outer membrane usher protein TcfC;
                     Provisional"
                     /db_xref="CDD:185210"
     Region          113..>174
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
ORIGIN      
        1 mvsgdahlqs ssynralsgg inldstlafg degrlimtgq sqgheagmiv dvesdipelt
       61 lradddqggn irlrpgrnlv pvtayrsgav qldmagqnap smtirpnvlp yhlnkggvay
      121 hqvrvmktvt vigrlldgqg mplkgamvvn hagrtvsead gffavemser npml
//
LOCUS       WP_257978540             207 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator, partial [Aeromonas salmonicida].
ACCESSION   WP_257978540
VERSION     WP_257978540.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 207)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         1..>207
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
     Region          18..207
                     /region_name="PRK10840"
                     /note="transcriptional regulator RcsB; Provisional"
                     /db_xref="CDD:182771"
ORIGIN      
        1 mfdslniirc fiwgspmsfk iiladdhpli ltgirsliah nqpgceivae ahqvsellnt
       61 lqqhncdlli tdfsmpgder sdgltmiqql krdyptlpil vltqihnagi lqsllqlgvs
      121 gvllkkavis elsdairqil sghsyigssv ktllaeagld hhttsiqltp kesevvrlla
      181 sgmsvtqvae ylhrsvktis tqkksam
//
LOCUS       WP_257978409              47 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzy polymerase domain-containing protein, partial [Aeromonas
            caviae].
ACCESSION   WP_257978409
VERSION     WP_257978409.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas caviae
  ORGANISM  Aeromonas caviae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 47)
  AUTHORS   Kadioglu,A., Weiser,J.N., Paton,J.C. and Andrew,P.W.
  TITLE     The role of Streptococcus pneumoniae virulence factors in host
            respiratory colonization and disease
  JOURNAL   Nat Rev Microbiol 6 (4), 288-301 (2008)
   PUBMED   18340341
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023274.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11846.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..47
                     /organism="Aeromonas caviae"
                     /db_xref="taxon:648"
     Protein         <1..>47
                     /product="Wzy polymerase domain-containing protein"
     Region          6..>26
                     /region_name="Wzy_C_2"
                     /note="Virulence factor membrane-bound polymerase,
                     C-terminal; pfam11846"
                     /db_xref="CDD:432124"
ORIGIN      
        1 wvkgaallal vtpillhtqt eypfyhaial wwalllllya mdaevee
//
LOCUS       WP_257978551             155 aa            linear   BCT 02-MAR-2025
DEFINITION  pseudouridine synthase, partial [Aeromonas salmonicida].
ACCESSION   WP_257978551
VERSION     WP_257978551.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 155)
  AUTHORS   Wrzesinski,J., Nurse,K., Bakin,A., Lane,B.G. and Ofengand,J.
  TITLE     A dual-specificity pseudouridine synthase: an Escherichia coli
            synthase purified and cloned on the basis of its specificity for
            psi 746 in 23S RNA is also specific for psi 32 in tRNA(phe)
  JOURNAL   RNA 1 (4), 437-448 (1995)
   PUBMED   7493321
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013045.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00849.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         1..>155
                     /product="pseudouridine synthase"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /GO_process="GO:0001522 - pseudouridine synthesis
                     [Evidence IEA]"
                     /GO_process="GO:0009451 - RNA modification [Evidence IEA]"
     Region          30..>155
                     /region_name="RluA"
                     /note="Pseudouridine synthase RluA, 23S rRNA- or
                     tRNA-specific [Translation, ribosomal structure and
                     biogenesis]; COG0564"
                     /db_xref="CDD:440330"
ORIGIN      
        1 miaprfqpvc pmsvivdtfi appceaaiei lfvdehllli nkpsgllsls gknpqnldsv
       61 hyrlvqdypg ctlvhrldfg tsglmvvakn kainallcqq fsqrvvskay sallcghlad
      121 degvidapia kdpalfplmk icaasgkpar sryev
//
LOCUS       WP_257978554             177 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Aeromonas
            salmonicida].
ACCESSION   WP_257978554
VERSION     WP_257978554.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 177)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..177
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <3..176
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            20..53
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 nghtqqisdi ievirgiadq tnllalnaai eaarageqgr gfavvadevr nlasrsaast
       61 qqitgmiski qsgadasirs mentvnnvsr gvslanqtge aitsikshaa nltglmgeis
      121 htlreqstaa nevvstvghi tslseqsgda arhvsqeaak lkqlsrllrq emgrfkl
//
LOCUS       WP_257978557             422 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Aeromonas
            salmonicida].
ACCESSION   WP_257978557
VERSION     WP_257978557.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 422)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..422
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          50..411
                     /region_name="TPP_PFOR_PNO"
                     /note="Thiamine pyrophosphate (TPP family), PFOR_PNO
                     subfamily, TPP-binding module; composed of proteins
                     similar to the single subunit pyruvate ferredoxin
                     oxidoreductase (PFOR) of Desulfovibrio Africanus, present
                     in bacteria and amitochondriate eukaryotes. This...;
                     cd03377"
                     /db_xref="CDD:239472"
     Site            order(63,86,115..116,208..211,237,239,241..243)
                     /site_type="other"
                     /note="TPP-binding site [chemical binding]"
                     /db_xref="CDD:239472"
     Site            order(76..78,92,97,105..107,109..114,117,120..121,
                     124..125,127..128,131..132,135,138,196,201,217,221..222,
                     228,243..244,249,256,258,261,265,269,273..274,277,
                     318..319,323..326,376,380,383,385,388,406)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239472"
ORIGIN      
        1 hegeraitmm dkaphlagqk qalrwfeslp wparervdfs tvrgaqflep lfefsgacag
       61 cgetpylkll tqlfgdrmlv anatgcssiy ggnlpttpwa kngegkgpaw snslfednae
      121 fgfgfrltad qhhgqavaal qamkgelget lveslidapq rleseiraqr nrvaqvrerl
      181 eevksgkare llslidqlvr rsvwivggdg waydigsagl dhvlasgrdv nvlvmdtevy
      241 sntggqmsks tplgavakfa aggktlakkd valqaisygn vyvariafga npqqalqalr
      301 eaeaypgpsl iiayshciah gidmelgltq qkravasghw pllrynpvlr sagqnpfsld
      361 slrpsiplae yraeenryqv laqshpeeae rlmqvaqkva wqkwatyeem atreashfhp
      421 pv
//
LOCUS       WP_257978578             270 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Aeromonas
            salmonicida].
ACCESSION   WP_257978578
VERSION     WP_257978578.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         1..>270
                     /product="ABC transporter substrate-binding protein"
     Region          40..>270
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mtiqchgrrk gvpvvaatll alfssglshs vlaaqpvpae lklaigaept egfdpllgws
       61 hgsylllhsp llkqnadlsw qnvltqavtp nkdgkgwlit lkpdlkfsng apltaedvaf
      121 tynsaakggg kidmgnfvsa kvvsptevai vlsapqstfv nvlgslgivs khdynaktya
      181 qkpvgagpyr lvsflpgqql vveanphyag gnndfkrlvf vfideesaya aaqssqldlv
      241 rippslaptv paslklwvrp svenrgivfp
//
LOCUS       WP_257978322             394 aa            linear   BCT 02-MAR-2025
DEFINITION  SgrR family transcriptional regulator, partial [Aeromonas caviae].
ACCESSION   WP_257978322
VERSION     WP_257978322.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas caviae
  ORGANISM  Aeromonas caviae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 394)
  AUTHORS   Vanderpool,C.K. and Gottesman,S.
  TITLE     The novel transcription factor SgrR coordinates the response to
            glucose-phosphate stress
  JOURNAL   J Bacteriol 189 (6), 2238-2248 (2007)
   PUBMED   17209026
REFERENCE   2  (residues 1 to 394)
  AUTHORS   Vanderpool,C.K. and Gottesman,S.
  TITLE     Involvement of a novel transcriptional activator and small RNA in
            post-transcriptional regulation of the glucose phosphoenolpyruvate
            phosphotransferase system
  JOURNAL   Mol Microbiol 54 (4), 1076-1089 (2004)
   PUBMED   15522088
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024203.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12793.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Aeromonas caviae"
                     /db_xref="taxon:648"
     Protein         1..>394
                     /product="SgrR family transcriptional regulator"
     Region          1..>394
                     /region_name="SgrR"
                     /note="DNA-binding transcriptional regulator SgrR of sgrS
                     sRNA, contains a MarR-type HTH domain and a
                     periplasmic-type solute-binding domain [Transcription];
                     COG4533"
                     /db_xref="CDD:443600"
ORIGIN      
        1 mptsrlyqqf qrlaqqlgcd ereislaeva dllcctprna rlllrrmqgq gwlcwtaeag
       61 rgrrsrltll dnqesltrrr lrdllsqgql aqavrlaedr ldlltpllie qlgqatregr
      121 qilrvpyyrp lprllptgpl rrseihlsrq ifngltrrne engeiegdla hhweclapch
      181 wrfylrpvvr fhhgrelvve dvmeslqalr drplfahlar lesrwprtld ihldspdpll
      241 phllaepvaa ilprelkgea nfalqpvgtg pyrvsandpl hlcleafddy fglralldei
      301 diwmlpelae rleshvrlgs dtpelgsmrg eselesgcyf llqddrspll qdpalrqwlt
      361 rllnpialma rvapelqrgw tsalgllphw retq
//
LOCUS       WP_257978611             123 aa            linear   BCT 02-MAR-2025
DEFINITION  DDE-type integrase/transposase/recombinase, partial [Aeromonas
            salmonicida].
ACCESSION   WP_257978611
VERSION     WP_257978611.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 123)
  AUTHORS   Dyda,F., Hickman,A.B., Jenkins,T.M., Engelman,A., Craigie,R. and
            Davies,D.R.
  TITLE     Crystal structure of the catalytic domain of HIV-1 integrase:
            similarity to other polynucleotidyl transferases
  JOURNAL   Science 266 (5193), 1981-1986 (1994)
   PUBMED   7801124
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012870.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00665.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..>123
                     /product="DDE-type integrase/transposase/recombinase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <1..123
                     /region_name="transpos_IS3"
                     /note="IS3 family transposase; NF033516"
                     /db_xref="CDD:468052"
ORIGIN      
        1 lvqprrayhk tthsfhrfyr hpnllkagpe qvtpvapeqv wvaditylpa rsgplylslv
       61 tdaysrkivg hhvhegmhae svamafkkal kqrrggegli hhsdrgvqyc sglyqslhar
      121 ygv
//
LOCUS       WP_257978618              66 aa            linear   BCT 02-MAR-2025
DEFINITION  GAF domain-containing protein, partial [Aeromonas salmonicida].
ACCESSION   WP_257978618
VERSION     WP_257978618.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 66)
  AUTHORS   Hughes,J.
  TITLE     Phytochrome three-dimensional structures and functions
  JOURNAL   Biochem Soc Trans 38 (2), 710-716 (2010)
   PUBMED   20298248
REFERENCE   2  (residues 1 to 66)
  AUTHORS   Heikaus,C.C., Pandit,J. and Klevit,R.E.
  TITLE     Cyclic nucleotide binding GAF domains from phosphodiesterases:
            structural and mechanistic insights
  JOURNAL   Structure 17 (12), 1551-1557 (2009)
   PUBMED   20004158
REFERENCE   3  (residues 1 to 66)
  AUTHORS   Aravind,L. and Ponting,C.P.
  TITLE     The GAF domain: an evolutionary link between diverse
            phototransducing proteins
  JOURNAL   Trends Biochem Sci 22 (12), 458-459 (1997)
   PUBMED   9433123
REFERENCE   4  (residues 1 to 66)
  AUTHORS   Santero,E., Hoover,T.R., North,A.K., Berger,D.K., Porter,S.C. and
            Kustu,S.
  TITLE     Role of integration host factor in stimulating transcription from
            the sigma 54-dependent nifH promoter
  JOURNAL   J Mol Biol 227 (3), 602-620 (1992)
   PUBMED   1404379
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013736.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01590.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..>66
                     /product="GAF domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
     Region          <4..>57
                     /region_name="PRK15429"
                     /note="formate hydrogenlyase transcriptional activator
                     FlhA"
                     /db_xref="CDD:237965"
ORIGIN      
        1 dsscilplry rgnllgvlil shpnadffad idislleqva artaiamnnv qaqqeisntn
       61 gakekt
//
LOCUS       WP_257978633              40 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein, partial
            [Aeromonas salmonicida].
ACCESSION   WP_257978633
VERSION     WP_257978633.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 40)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..40
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..>40
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..>40
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mkilvtggag figsavvrhi iqhtqdsvvn ldkltyagnl
//
LOCUS       WP_257978650             721 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257978650
VERSION     WP_257978650.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 721)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..721
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=78132
     Region          <27..76
                     /region_name="Cornifin"
                     /note="Cornifin (SPRR) family; pfam02389"
                     /db_xref="CDD:280537"
     Region          <57..265
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          342..416
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); pfam02368"
                     /db_xref="CDD:396788"
     Region          <611..>675
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllltslfg cnsdsgssts qppmslpeev lpdepeieap ipelpvpefp dvskpevpet
       61 pevtppepsd pvipeppvpd kvvsrialnq srvslaegel aqvkvigfyn ddtqddltsq
      121 vvwnvenadi vnidergvit avktgvsvir adldefssem tvqvvdaklt niyfdlphka
      181 iakglsfqak aygeytdkqt rdishlvewd stdcsvvmpg ingiftaqde gdadiyaeld
      241 gltsthgsit vtpavlvsmd isstalempl gthkplvvmg tlsdgeqvdl srgitwhvdn
      301 dvveivdnvv kakhkgtalv taaldgvqse piqvqvtdai ltnievttna ssvakgnstq
      361 lsaqgvysde srvelteqva wwvdnqdvlq legarvkgla vgqamiyatk daitsaplqi
      421 qvtnavleki hvhpseitle eknvqrfyay geysdettqd vthrvtwrss nkavldliag
      481 glsnsaqlgs vtisasfgel kgtsevkvve akekeaaisi cpqprsgegs veaclmvasd
      541 edgrlftapp svklmnklgy elvkplsyda tkpktyvgik tedgtrgpvg dfamfnqygr
      601 dragltsqya nwchdlsvrn fagrdnwrra trnelfslyr asrgsvwdgt esiyeedkdg
      661 ggfgwpanse ywstslmdlp hhegvvydii nlhrgraqlv mdardpayas cvsdapgvpl
      721 k
//
LOCUS       WP_257978655             471 aa            linear   BCT 02-MAR-2025
DEFINITION  LA2681 family HEPN domain-containing protein [Vibrio
            parahaemolyticus].
ACCESSION   WP_257978655
VERSION     WP_257978655.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 471)
  AUTHORS   Anantharaman,V., Makarova,K.S., Burroughs,A.M., Koonin,E.V. and
            Aravind,L.
  TITLE     Comprehensive analysis of the HEPN superfamily: identification of
            novel roles in intra-genomic conflicts, defense, pathogenesis and
            RNA processing
  JOURNAL   Biol Direct 8, 15 (2013)
   PUBMED   23768067
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037095.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18733.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..471
                     /product="LA2681 family HEPN domain-containing protein"
                     /calculated_mol_wt=55364
     Region          178..449
                     /region_name="HEPN_LA2681"
                     /note="LA2681-like HEPN; pfam18733"
                     /db_xref="CDD:436699"
ORIGIN      
        1 mictnlanhl ssqgrafcci elydeairld nnpvayvaka rnelfvagsl ydlrhsqyhy
       61 ytaakllkql epyqdqlepe qrtpieqggm lhdfnewfhg nfsfddfdsf ktfkeefese
      121 eqaqylkwcg enrlflndln dvckdeivyq dvlalssfvs einpiiiese klayhvnyde
      181 ikndycyary lmhqafmmed eekhyfnnty khvdgycgnl dnlkvshlks sfktlyslfd
      241 kiayflhrff dlndiskdnk iyidklfrkl ngnkwkpndk ledgrnffin alffilqdlr
      301 dveghesvsq wvdpdtkafs eirnaiehrs lvivdgeiyd lsvnynayak mkseeldkel
      361 sdlvselesi gqsisaarka kdaeqlselm ekrkeleskc kkieqkkyek qklsthtlhv
      421 sieefekrlf tliklvrtsi mylslainld tnfkkenqkg fampreiplk d
//
LOCUS       WP_257978665             721 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257978665
VERSION     WP_257978665.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 721)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..721
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=78167
     Region          <27..76
                     /region_name="Cornifin"
                     /note="Cornifin (SPRR) family; pfam02389"
                     /db_xref="CDD:280537"
     Region          <57..265
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          342..416
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); pfam02368"
                     /db_xref="CDD:396788"
     Region          <611..>675
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllvtslfg cnsdsgssts qppmslpeev lpdepeieap ipelpvpefp diskpevpet
       61 pevtppepsd pvipeppvpd kvvsrialnq srvslaegel aqvkvigfyn ddtqddltsq
      121 vvwnvenadi vnidergvit avktgvsvir adldefssem tvqvvdaklt niyfdmphkv
      181 iakglsfqak aygeytdkqt rdishlvewd stdcsvvmpg tngiftaqde gdadiyaeld
      241 gltsthgsit vtpavlvsmd isstalempl gthkplvvmg tlsdgeqvdl trgitwhvdn
      301 dvveivdnvv kakhkgtalv taaldgvqse piqvqvtdai ltnievttna ssvakgnstq
      361 lsaqgvysde srvelteqva wwvdnqdvlq legarvkgla vgqamvyatk daitsaplqi
      421 qvtnavleki hvhpseitle eknvqrfyay geysdettqd vthrvtwrss nkavldliag
      481 glsnsaqlgs vtisasfgel kgtsevkvve aeekeaaisi cpqprsgegs veaclmvasd
      541 edgrlftapp svklmnklgy elvkplsyda tkpktyvgik tedgtrgpvg dfamfnqygr
      601 dragltsqya nwchdlsvrn fagrdnwrra trnelfslyr asrgsvwdgt esiyeedkdg
      661 ggfgwpanse ywstslmdlp hhegvvydii nlhrgraqlv mdardpayas cvsdapgvpl
      721 k
//
LOCUS       WP_257978727             875 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Vibrio parahaemolyticus].
ACCESSION   WP_257978727
VERSION     WP_257978727.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 875)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 875)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019348.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07728.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..875
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=100151
     Region          413..>465
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Region          <574..771
                     /region_name="McrB"
                     /note="5-methylcytosine-specific restriction endonuclease
                     McrBC, GTP-binding regulatory subunit McrB [Defense
                     mechanisms]; COG1401"
                     /db_xref="CDD:441011"
ORIGIN      
        1 meqidnniny wlvgasyggg ddqterflqd gvwqngyddr yleqvkqvka gdriaiksay
       61 vrtrseslpf dnrghpvstm kikaigtvtk nhgdgqwldv dwqpidqere wyfytalkti
      121 wklnkskdfa qrliefaflg kpqditkfrn dsywaprfgd qavidamqfp wvgfyeqvas
      181 allrfkddrq pllkgifdia eqtglanyfg dkyangengl lqdicpftvm gmfnrgikds
      241 srtllaqkla dflsvdivpp tqfnaiptln ninawffkye kdrqpddidk lwevfeaain
      301 fadqddeesr kefasafdqa atvantkwnl tmglfwvrpw syptlesnsr sllaekynyr
      361 fnranslcta qeyldcitfl ndrfatdhdi nsfpafsyst watepvievk epehpvyeve
      421 pmsnaknviy ygppgtgkty llqklqakyt sspevvddsm wlqeniapln wmqvlvlsll
      481 slgkqakvsd ivgskyfqik aklnnrdnnl sqtawsylqk ftiadsttvn ykgrsepavf
      541 dkssdsvwhl vdnklelved lvalfqeleq gpqagteikr yttttfhqsy gyeefieglk
      601 astdedgnvh ysieageflk lcrraeqdpa hqyaifidei nrgniskifg elislvevnk
      661 rsqgkypmsi nlacsgkpft vpsnvdiigt mntadrslal mdtalrrrfe fiemmpkpel
      721 lalndgikgi dlqkllqvln qrieilynre htlghaffmp vkelvdagee eqafsalvsv
      781 fqnkitplle eyffedcski rlvladnqkk sqelqfvseq vqntqqlndl fgnnheleqy
      841 gqsitkytla dkeadvwikp esyigiyttl dssae
//
LOCUS       WP_257978766              97 aa            linear   BCT 02-MAR-2025
DEFINITION  phospholipase D-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257978766
VERSION     WP_257978766.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13091.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..97
                     /product="phospholipase D-like domain-containing protein"
     Region          <1..97
                     /region_name="cls"
                     /note="cardiolipin synthetase; Reviewed; PRK01642"
                     /db_xref="CDD:234967"
ORIGIN      
        1 aagvkiyefy ggllhtksvv iddqfclvgt vnmdmrslwl nfevtlavdd eeftkqlswl
       61 qdgyikqshp vvldewekrs lysrflervf ylfnpll
//
LOCUS       WP_257978765             382 aa            linear   BCT 02-MAR-2025
DEFINITION  replication initiation factor domain-containing protein [Vibrio
            parahaemolyticus].
ACCESSION   WP_257978765
VERSION     WP_257978765.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 382)
  AUTHORS   Li,A.H., Silvestrini,B., Leone,M.G., Giacomelli,S. and Cheng,C.Y.
  TITLE     Cerebrin-50, a human cerebrospinal fluid protein whose mRNA is
            present in multiple tissues but predominantly expressed in the
            lymphoblastoid cells and the brain
  JOURNAL   Biochem Mol Biol Int 35 (1), 135-144 (1995)
   PUBMED   7735128
REFERENCE   2  (residues 1 to 382)
  AUTHORS   Balson,D.F. and Shaw,W.V.
  TITLE     Nucleotide sequence of the rep gene of staphylococcal plasmid pCW7
  JOURNAL   Plasmid 24 (1), 74-80 (1990)
   PUBMED   2270231
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014537.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02486.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..382
                     /product="replication initiation factor domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /calculated_mol_wt=43310
     Region          1..382
                     /region_name="PHA00202"
                     /note="DNA replication initiation protein"
                     /db_xref="CDD:164786"
ORIGIN      
        1 mttatnilks fdeqsvhidy lcftfavkdl rhchdavrrl hkheeykgfa kpgllqrhcr
       61 apkfpappvf nptvaqtsde idaynkafdi cyrnyledcl riftnqvlgl slsaprglgf
      121 qfytesmklt spdgedfcgf vgiggnndtv hfqingtgck hvfarrptws lhdwltnvlg
      181 vqtlarvdla yddydgifdc eyaykawrdd cfrtaergrg pvlhedmtia sigkdgkpiy
      241 tkeqysigsr tsriywriyn kaleqklant glvwyrseve lkkwnvdvll npagayaaln
      301 dfaasistak kfntkpvptk raaldllasa hwmrrqygki lnsliefheg dietvvgslv
      361 rdgtkftfpd tygklvthil et
//
LOCUS       WP_257978777             532 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257978777
VERSION     WP_257978777.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024700.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13304.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>532
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
     Region          1..>57
                     /region_name="YbjD"
                     /note="Predicted ATP-dependent endonuclease of the OLD
                     family, contains P-loop ATPase and TOPRIM domains
                     [Replication, recombination and repair]; COG3593"
                     /db_xref="CDD:442812"
     Region          39..495
                     /region_name="restrict_AAA_1"
                     /note="restriction system-associated AAA family ATPase;
                     TIGR04435"
                     /db_xref="CDD:275228"
ORIGIN      
        1 mrlasftigs dregerqrfk nlknvtidfe eqewitlvig wngtgksnvl ealavlfrdl
       61 imgkngqgek dkpsfsytlr yfchhkeiei sadpdrtkda ylvsyrdlge klenttlqvd
      121 ffseltddst lgglkfnefk krqdeflpky vfgyysghsd rmqsvfrpyl qqydkklrns
      181 ksedpglrrl fyalpvhsqf vllafvlnqd dlvrhfldtq lgletdenae sidsvlleln
      241 epswnlnksk dpkgtygack dtpdifwgae gvvrdflnrv hkvatapiki srkddatlwn
      301 kkgreylymf ikdvtrltel vgdqepreff rdlestyvse lisevrirvk lkkndgsvtf
      361 relsegeqql ltvlgllrft aedeslflld epdthlnpkw svdyidylnk fvtsgskgen
      421 nshivltthn piaiaeltrd qvqilsrdde trtieshkph ydpqgmgyag iitsdmfglg
      481 ssldkrtqkr letyralasi enktkfealr fqvisewldn drfsmsqrdd dy
//
LOCUS       WP_257978779             219 aa            linear   BCT 02-MAR-2025
DEFINITION  WYL domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257978779
VERSION     WP_257978779.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 219)
  AUTHORS   Makarova,K.S., Anantharaman,V., Grishin,N.V., Koonin,E.V. and
            Aravind,L.
  TITLE     CARF and WYL domains: ligand-binding regulators of prokaryotic
            defense systems
  JOURNAL   Front Genet 5, 102 (2014)
   PUBMED   24817877
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 219)
  AUTHORS   Hein,S., Scholz,I., Voss,B. and Hess,W.R.
  TITLE     Adaptation and modification of three CRISPR loci in two closely
            related cyanobacteria
  JOURNAL   RNA Biol 10 (5), 852-864 (2013)
   PUBMED   23535141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024676.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13280.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..219
                     /product="WYL domain-containing protein"
                     /calculated_mol_wt=25177
ORIGIN      
        1 mtvrelqqql alldihrtpr sikrylddii vevfnvecds msmphvyrkt seqllklnkq
       61 emlywqltnk yllplvpdal nygqgssser nkplphkgsa hskeqewlak vhvylptire
      121 wsdeqrqvln aihtallhnr mlnissqvlq qekalieplg lsvqcdalll lfrlsgqhti
      181 rtlalplide asvstfsfty ptdfnierfm rehdgvsas
//
LOCUS       WP_257978799             172 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257978799
VERSION     WP_257978799.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>172
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
     Region          11..>167
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 qtikqsrqvd deidlgklfg iildakwlil ctvvlfsivg vgvailstpi ykadaliqie
       61 skssggisam vgdmgelfsa essatteiei iksrmilggt vdkfnlttva spnympiigk
      121 glariqgeqi sinvtrfnap syavgipltl evvdaeqkaf kltedngsvv le
//
LOCUS       WP_257978812              40 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6500 family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257978812
VERSION     WP_257978812.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039799.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20110.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..40
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..40
                     /product="DUF6500 family protein"
     Region          <2..36
                     /region_name="DUF6500"
                     /note="Family of unknown function (DUF6500); pfam20110"
                     /db_xref="CDD:437942"
ORIGIN      
        1 anknddpell meaatwwiqt hqldhfekak kiiamiesgk
//
LOCUS       WP_257978809             530 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257978809
VERSION     WP_257978809.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>530
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          <202..467
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq prpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnaendvit teedtavtid vlvndsdveg dalsiqsasv pkeqgtvevv
      301 dgklvftpae nfngeatisy ivtdgdltde akvfvtvtpv ndspvavddt tsiqedtavt
      361 idvltndtdv dgdklsiesa svpkeqgtve vvdgklvftp aenfsgdaei tytvtdgelt
      421 deakvtvtvn svnnaptikv davesiteda vstdtvvatl tvrdtdtped qltvslenns
      481 ngyfvlvgne vkltqagvda vnndelnlkd laisasvsdg vnptasdsds
//
LOCUS       WP_257978877             382 aa            linear   BCT 02-MAR-2025
DEFINITION  replication initiation factor domain-containing protein [Vibrio
            parahaemolyticus].
ACCESSION   WP_257978877
VERSION     WP_257978877.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 382)
  AUTHORS   Li,A.H., Silvestrini,B., Leone,M.G., Giacomelli,S. and Cheng,C.Y.
  TITLE     Cerebrin-50, a human cerebrospinal fluid protein whose mRNA is
            present in multiple tissues but predominantly expressed in the
            lymphoblastoid cells and the brain
  JOURNAL   Biochem Mol Biol Int 35 (1), 135-144 (1995)
   PUBMED   7735128
REFERENCE   2  (residues 1 to 382)
  AUTHORS   Balson,D.F. and Shaw,W.V.
  TITLE     Nucleotide sequence of the rep gene of staphylococcal plasmid pCW7
  JOURNAL   Plasmid 24 (1), 74-80 (1990)
   PUBMED   2270231
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014537.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02486.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..382
                     /product="replication initiation factor domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /calculated_mol_wt=43325
     Region          1..382
                     /region_name="PHA00202"
                     /note="DNA replication initiation protein"
                     /db_xref="CDD:164786"
ORIGIN      
        1 mttatnilkk fdeqsvhidy lcftfavkdl rhchdavrrl hkheeykgfa ksgllqrhcr
       61 apkfpappvf nptvaktsee ieaynkafdi cyrnyledcl riftnqvlgl slsaprglgf
      121 qfytesmklt spdgedfcgf vgiggnndtv hfqingtgck hvfarrpaws lhdwltnvlg
      181 vqtlarvdla yddydgifdc eyaykawrdd cfrtaergrg pvlhedmtia sigkdgkpiy
      241 tkeqysigsr tsriywriyn kaleqklant glvwyrseve lkkwnvdvll npaggyaaln
      301 dfaasistak kfntkpvptk raaldllasa hwmrrqygki lnsliefheg dietvvgslv
      361 rdgtkftfpd tygklvthil et
//
LOCUS       WP_257978906             422 aa            linear   BCT 02-MAR-2025
DEFINITION  SBBP repeat-containing protein [Corallococcus exiguus].
ACCESSION   WP_257978906
VERSION     WP_257978906.1
KEYWORDS    RefSeq.
SOURCE      Corallococcus exiguus
  ORGANISM  Corallococcus exiguus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Corallococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018449.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06739.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Corallococcus exiguus"
                     /db_xref="taxon:83462"
     Protein         1..422
                     /product="SBBP repeat-containing protein"
                     /calculated_mol_wt=43141
     Region          <78..>180
                     /region_name="Vgb"
                     /note="Streptogramin lyase [Defense mechanisms]; COG4257"
                     /db_xref="CDD:443399"
     Region          88..118
                     /region_name="SBBP"
                     /note="Beta-propeller repeat; pfam06739"
                     /db_xref="CDD:115400"
ORIGIN      
        1 mkhlllsmfg fagvvgaagv psvaaaqvps pswvaqlgan ldeqanavav sgssvyvvgq
       61 ttsqlgsdpk aggqdafiar ydtagnlqwv hqlgttgsdr atavatdadg nayvagttfg
      121 gfdfytnagg idffiakyds agnrlwlrqn gtqmddfatg iaigaddtly ftgytggsfa
      181 nggnpnnydi iaglydtagn pywlqqfgss asdmargiav tsthevyivg ntygsldgtt
      241 spvnsdifll klnilgaqqw vrqidagdld dgksvavgpd ggvyivgetf gsmdgntnng
      301 tidvllaryd sagnrdwsrm lgggqpdyaf gvavssnnvv qvvgytggla gipyagasda
      361 fltrydalgt klgtqtlgts rqdvargvav dasgnayvag qtggslggnt sagsndafla
      421 rf
//
LOCUS       WP_257978914             465 aa            linear   BCT 02-MAR-2025
DEFINITION  BamA/TamA family outer membrane protein [Corallococcus exiguus].
ACCESSION   WP_257978914
VERSION     WP_257978914.1
KEYWORDS    RefSeq.
SOURCE      Corallococcus exiguus
  ORGANISM  Corallococcus exiguus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Corallococcus.
REFERENCE   1  (residues 1 to 465)
  AUTHORS   Heinz,E. and Lithgow,T.
  TITLE     A comprehensive analysis of the Omp85/TpsB protein superfamily
            structural diversity, taxonomic occurrence, and evolution
  JOURNAL   Front Microbiol 5, 370 (2014)
   PUBMED   25101071
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013283.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01103.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Corallococcus exiguus"
                     /db_xref="taxon:83462"
     Protein         1..465
                     /product="BamA/TamA family outer membrane protein"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /calculated_mol_wt=50713
     Region          <37..451
                     /region_name="BamA"
                     /note="Outer membrane protein assembly factor BamA [Cell
                     wall/membrane/envelope biogenesis]; COG4775"
                     /db_xref="CDD:443807"
ORIGIN      
        1 mplscfrrhl svlalaltgl aapvahaded tpvssidrsq vgevtvegan kttsgtvrsf
       61 gqvgvgdevd seelekverr llatglfqev rvgtepmpdg rvrlvlrvkd kaswvvaptv
      121 alssantggg llyaennlgg rakkfavaaq vstgesglyv gfldpilfgl pqlkfslegq
      181 lksdrvdeys mdaseddpei lrrtrfnsas isselgfilf ervraaakyr lasidaktpd
      241 pqmpvtvppf stgpamrdts lrlmvgldsr qtlhavtegl nleasyevst pgvwsefdyr
      301 kfgllyrhgi rfftennlvl rgelvlgrhl pfqqelvmgg ntlrgfqyrq frgdsrltft
      361 aeyhfplfkv qslafrgvaf sdtgaiawwd vpedgnlrda ngrvirnylr etitgqnavt
      421 vaqgvggglr lylnnvvlpl lgvdvayavn sgqvrfylva gvtps
//
LOCUS       WP_257978937             312 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Corallococcus
            exiguus].
ACCESSION   WP_257978937
VERSION     WP_257978937.1
KEYWORDS    RefSeq.
SOURCE      Corallococcus exiguus
  ORGANISM  Corallococcus exiguus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Corallococcus.
REFERENCE   1  (residues 1 to 312)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Corallococcus exiguus"
                     /db_xref="taxon:83462"
     Protein         1..312
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=34918
     Region          1..310
                     /region_name="PRK15421"
                     /note="HTH-type transcriptional regulator MetR"
                     /db_xref="CDD:185319"
ORIGIN      
        1 mlelrhfkli aavadtgsla aasrqlhlts salshqlrda eerlgvqlfq rrqrrllltg
       61 sgeklllsar rvlsevaqae avcrahpqdd llrlstgcyt vygwlppilg rwqaehprve
      121 lrivleatrq plgallngel dlalttdvpp qarlaqtalf edelmlvvpe dhalarrehv
      181 taedlvrehl ltyaapreql dvftrvlwpa giephrvspv pltealielv rggigvtalp
      241 qwmlpdqrhg lqtvrltprg irrrwsavtr asrqrpapla hfiqllrerf slhgkarpra
      301 asrrgvpprm gv
//
LOCUS       WP_257978958             540 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1592 domain-containing protein [Corallococcus exiguus].
ACCESSION   WP_257978958
VERSION     WP_257978958.1
KEYWORDS    RefSeq.
SOURCE      Corallococcus exiguus
  ORGANISM  Corallococcus exiguus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Corallococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019259.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07631.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Corallococcus exiguus"
                     /db_xref="taxon:83462"
     Protein         1..540
                     /product="DUF1592 domain-containing protein"
                     /calculated_mol_wt=58453
     Region          40..100
                     /region_name="PSD3"
                     /note="Protein of unknown function (DUF1587); pfam07626"
                     /db_xref="CDD:429563"
     Region          120..180
                     /region_name="PSD5"
                     /note="Protein of unknown function (DUF1595); pfam07637"
                     /db_xref="CDD:429569"
     Region          194..321
                     /region_name="PSD4"
                     /note="Protein of unknown function (DUF1592); pfam07631"
                     /db_xref="CDD:429565"
     Region          343..440
                     /region_name="PSCyt3"
                     /note="Protein of unknown function (DUF1588); pfam07627"
                     /db_xref="CDD:429564"
     Region          455..532
                     /region_name="PSD2"
                     /note="Protein of unknown function (DUF1585); pfam07624"
                     /db_xref="CDD:429562"
ORIGIN      
        1 mplrrfylss alvlsasact gniggqdaep esaaaparvr rltrdeynks atavlgtevd
       61 iaqgfaaedt ilgfstherl qvtslladql dtaavtlaeq gksqlsdlya cpkgktqdec
      121 arafiqrvge rafrrpvtad eetdllalfn egkkggtmat gaelvlqalf ssssflyrte
      181 lgpetarkgq vveltayeva selsfmvtgg ppdatllasa kagtlssade retqarrllk
      241 teaaqvklrq ffvewlglgg lakvnknnlv ypdysvdfrd smvrerdafi dfivkehsgs
      301 vaellganys fvdetlanfy gelertnvdd atglgrvtlp perlgiltqa gvmstyahfd
      361 ssspikrgkf vltrllcrtv pappanvsti ppalsedatt rerfaahtnn pacaschkti
      421 dpmgfgmedf dglgqhrtee ngrkvdasga viardgttnl gdftggaqla rylttseela
      481 ncvplqfvry amgrdehasd aellaamrtg pyrtdrlkit evlvslvrss sftqrrlptr
//
LOCUS       WP_257978976              72 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3693 domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257978976
VERSION     WP_257978976.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023888.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12472.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..72
                     /product="DUF3693 domain-containing protein"
                     /calculated_mol_wt=8107
     Region          <1..66
                     /region_name="DUF3693"
                     /note="Phage related protein; cl22943"
                     /db_xref="CDD:451460"
ORIGIN      
        1 makkfdrlgl ssisitcael alviaspqep lyqcalcdvm lnnvsyrlhi hpfdyqgiyd
       61 elskneqelr fs
//
LOCUS       WP_257978959             147 aa            linear   BCT 02-MAR-2025
DEFINITION  SET domain-containing protein-lysine N-methyltransferase
            [Corallococcus exiguus].
ACCESSION   WP_257978959
VERSION     WP_257978959.1
KEYWORDS    RefSeq.
SOURCE      Corallococcus exiguus
  ORGANISM  Corallococcus exiguus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Corallococcus.
REFERENCE   1  (residues 1 to 147)
  AUTHORS   Marmorstein,R.
  TITLE     Structure of SET domain proteins: a new twist on histone
            methylation
  JOURNAL   Trends Biochem Sci 28 (2), 59-62 (2003)
   PUBMED   12575990
REFERENCE   2  (residues 1 to 147)
  AUTHORS   Min,J., Zhang,X., Cheng,X., Grewal,S.I. and Xu,R.M.
  TITLE     Structure of the SET domain histone lysine methyltransferase Clr4
  JOURNAL   Nat Struct Biol 9 (11), 828-832 (2002)
   PUBMED   12389037
REFERENCE   3  (residues 1 to 147)
  AUTHORS   Huang,S., Shao,G. and Liu,L.
  TITLE     The PR domain of the Rb-binding zinc finger protein RIZ1 is a
            protein binding interface and is related to the SET domain
            functioning in chromatin-mediated gene expression
  JOURNAL   J Biol Chem 273 (26), 15933-15939 (1998)
   PUBMED   9632640
REFERENCE   4  (residues 1 to 147)
  AUTHORS   Cui,X., De Vivo,I., Slany,R., Miyamoto,A., Firestein,R. and
            Cleary,M.L.
  TITLE     Association of SET domain and myotubularin-related proteins
            modulates growth control
  JOURNAL   Nat Genet 18 (4), 331-337 (1998)
   PUBMED   9537414
REFERENCE   5  (residues 1 to 147)
  AUTHORS   Tripoulas,N., LaJeunesse,D., Gildea,J. and Shearn,A.
  TITLE     The Drosophila ash1 gene product, which is localized at specific
            sites on polytene chromosomes, contains a SET domain and a PHD
            finger
  JOURNAL   Genetics 143 (2), 913-928 (1996)
   PUBMED   8725238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013052.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00856.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Corallococcus exiguus"
                     /db_xref="taxon:83462"
     Protein         1..147
                     /product="SET domain-containing protein-lysine
                     N-methyltransferase"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=16784
     Region          32..139
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     Site            order(32..33,93..98,106..108,131..134)
                     /site_type="active"
                     /db_xref="CDD:380914"
     Site            order(32..33,94..98,133)
                     /site_type="other"
                     /note="SAM binding site [polypeptide binding]"
                     /db_xref="CDD:380914"
ORIGIN      
        1 mdatgsesda lmnlgpalfl ypgvkvrpcq wgmgvftdtf iaagelieec hylkvpqqqf
       61 rgeplddyvf eirwhrneep regdwvalvm gygmiynhss epnasysrae dldvfryhal
      121 rdihpgeqic isygenwwka rgeevpp
//
LOCUS       WP_257978990             681 aa            linear   BCT 02-MAR-2025
DEFINITION  PAS domain-containing protein [Corallococcus exiguus].
ACCESSION   WP_257978990
VERSION     WP_257978990.1
KEYWORDS    RefSeq.
SOURCE      Corallococcus exiguus
  ORGANISM  Corallococcus exiguus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Corallococcus.
REFERENCE   1  (residues 1 to 681)
  AUTHORS   Hefti,M.H., Francoijs,K.J., de Vries,S.C., Dixon,R. and Vervoort,J.
  TITLE     The PAS fold. A redefinition of the PAS domain based upon
            structural prediction
  JOURNAL   Eur J Biochem 271 (6), 1198-1208 (2004)
   PUBMED   15009198
REFERENCE   2  (residues 1 to 681)
  AUTHORS   Ponting,C.P. and Aravind,L.
  TITLE     PAS: a multifunctional domain family comes to light
  JOURNAL   Curr Biol 7 (11), R674-R677 (1997)
   PUBMED   9382818
REFERENCE   3  (residues 1 to 681)
  AUTHORS   Zhulin,I.B., Taylor,B.L. and Dixon,R.
  TITLE     PAS domain S-boxes in Archaea, Bacteria and sensors for oxygen and
            redox
  JOURNAL   Trends Biochem Sci 22 (9), 331-333 (1997)
   PUBMED   9301332
REFERENCE   4  (residues 1 to 681)
  AUTHORS   Borgstahl,G.E., Williams,D.R. and Getzoff,E.D.
  TITLE     1.4 A structure of photoactive yellow protein, a cytosolic
            photoreceptor: unusual fold, active site, and chromophore
  JOURNAL   Biochemistry 34 (19), 6278-6287 (1995)
   PUBMED   7756254
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020037.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08448.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Corallococcus exiguus"
                     /db_xref="taxon:83462"
     Protein         1..681
                     /product="PAS domain-containing protein"
                     /calculated_mol_wt=74941
     Region          46..253
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          159..520
                     /region_name="COG4191"
                     /note="Signal transduction histidine kinase regulating
                     C4-dicarboxylate transport system [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443345"
     Region          538..>654
                     /region_name="AtoC"
                     /note="DNA-binding transcriptional response regulator,
                     NtrC family, contains REC, AAA-type ATPase, and a Fis-type
                     DNA-binding domains [Signal transduction mechanisms];
                     COG2204"
                     /db_xref="CDD:441806"
ORIGIN      
        1 msatdttval plpdallaal eeaerehpea cmvlravrsp ggviqdfewl wanpaaaral
       61 grgpeylrgr rlgevsskgg iagrmdllrq vvesgrphad hftegevllq gtavplrdgv
      121 llrlrditsa qrveeglret ldwvrdvles mpdafftvdt dwrltyvnrn aaaltgrsqe
      181 elfrrvlwes cpelcgtpfe rtmrevaaee syrlfelrtg rdrwhevhaw ssgrnistya
      241 rditdkkrvq aerdallare hsgrleaeal aqrrthelma arerlvqsek lamagqlaag
      301 vgheinnpls yvagnlqfav eqltplarrp glqdvlgeal ealreakega erirvivrdl
      361 qtfaradelr lgpvdvhasl efgismamth lrsraqverh fgqvppalah earlgqvflh
      421 llinaahaip agaferhrvt lttrregawv laevsdtglg mtpevlqraf epffttrpvg
      481 egsglglsic lglvrsmhge ltatsipgmg stfqvrlpvs epivhpgvpa vraddgpsrk
      541 rvlvvddepq ltsvlrrilg rqhdvvvahs grealalleq ddafdrvfcd lmmadltgmd
      601 vhaelsrrrp ellsrfvfmt ggsfterara flqavplpri ekpfepgllh slvessppra
      661 gqrgggeggg atasprrapg a
//
LOCUS       WP_257979026             741 aa            linear   BCT 02-MAR-2025
DEFINITION  YfbK domain-containing protein [Corallococcus exiguus].
ACCESSION   WP_257979026
VERSION     WP_257979026.1
KEYWORDS    RefSeq.
SOURCE      Corallococcus exiguus
  ORGANISM  Corallococcus exiguus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Corallococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023459.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12034.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Corallococcus exiguus"
                     /db_xref="taxon:83462"
     Protein         1..741
                     /product="YfbK domain-containing protein"
                     /calculated_mol_wt=80886
     Region          35..115
                     /region_name="CarboxypepD_reg"
                     /note="Carboxypeptidase regulatory-like domain; pfam13620"
                     /db_xref="CDD:433354"
     Region          278..589
                     /region_name="YfbK"
                     /note="Secreted protein containing bacterial Ig-like
                     domain and vWFA domain [General function prediction only];
                     COG2304"
                     /db_xref="CDD:441879"
     Region          551..689
                     /region_name="DUF3520"
                     /note="Domain of unknown function (DUF3520); pfam12034"
                     /db_xref="CDD:432277"
ORIGIN      
        1 mlksllrstl plflmmpaap alaqpdagaa atsviigtvi dtetkkplpd vvvtatspsl
       61 qgeqlvvtdv hgnyripqlp agtytlrfel esfkpfarpe iqllpnrtir vnvemlpesf
      121 sstetlvgsp pvidvggtnh gvnvdqefik riavarpvgk ggatrnfesl aesapskasd
      181 sygvgigtsg pgnryvydgl ttndpsrdgd pnsnndrara pswalpymhv vvpdgtpqtv
      241 yrapqasavp tpqpapertv apknqrffdm yfkgygvnpt vdteeerfst fsvdtdtasy
      301 tltraylerg alpdeqavrv eefintfdyd yanapdapfs vnvegfpspa rkgyqvvhig
      361 vkardvsrae rkpahlvfvi dvsgsmnmen rlglvkrslr llvdalderd wvsivvygst
      421 ahqvlaptna tqkavilsai dsvqsegstn aqagmelgya laashlvkgg inrvilcsdg
      481 vanngitqad giwervkeqa aagitlstvg fgmgnyndvl merlaqvgeg nysyvdklee
      541 arrifvqnlt gtlqvvakdv klqvefdrkt vsryrligye nrlltkqqfn ddrvdagevg
      601 aghavtalye vklrdpaqtn fgtlriryka peggssrlie kampmtllrp ayekaasptr
      661 lsyvaaafae klrgsywarp ltydalvslw eelgttlktr advvelgnli rlakkldrre
      721 drfesfapvr tmdadrvpti k
//
LOCUS       WP_257978997             218 aa            linear   BCT 02-MAR-2025
DEFINITION  sterol desaturase family protein [Corallococcus exiguus].
ACCESSION   WP_257978997
VERSION     WP_257978997.1
KEYWORDS    RefSeq.
SOURCE      Corallococcus exiguus
  ORGANISM  Corallococcus exiguus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Corallococcus.
REFERENCE   1  (residues 1 to 218)
  AUTHORS   Zhu,G., Koszelak-Rosenblum,M., Connelly,S.M., Dumont,M.E. and
            Malkowski,M.G.
  TITLE     The Crystal Structure of an Integral Membrane Fatty Acid
            alpha-Hydroxylase
  JOURNAL   J Biol Chem 290 (50), 29820-29833 (2015)
   PUBMED   26515067
REFERENCE   2  (residues 1 to 218)
  AUTHORS   Lagarde,D. and Vermaas,W.
  TITLE     The zeaxanthin biosynthesis enzyme beta-carotene hydroxylase is
            involved in myxoxanthophyll synthesis in Synechocystis sp. PCC 6803
  JOURNAL   FEBS Lett 454 (3), 247-251 (1999)
   PUBMED   10431816
REFERENCE   3  (residues 1 to 218)
  AUTHORS   Husselstein,T., Schaller,H., Gachotte,D. and Benveniste,P.
  TITLE     Delta7-sterol-C5-desaturase: molecular characterization and
            functional expression of wild-type and mutant alleles
  JOURNAL   Plant Mol Biol 39 (5), 891-906 (1999)
   PUBMED   10344195
REFERENCE   4  (residues 1 to 218)
  AUTHORS   Mitchell,A.G. and Martin,C.E.
  TITLE     Fah1p, a Saccharomyces cerevisiae cytochrome b5 fusion protein, and
            its Arabidopsis thaliana homolog that lacks the cytochrome b5
            domain both function in the alpha-hydroxylation of
            sphingolipid-associated very long chain fatty acids
  JOURNAL   J Biol Chem 272 (45), 28281-28288 (1997)
   PUBMED   9353282
REFERENCE   5  (residues 1 to 218)
  AUTHORS   Bard,M., Bruner,D.A., Pierson,C.A., Lees,N.D., Biermann,B.,
            Frye,L., Koegel,C. and Barbuch,R.
  TITLE     Cloning and characterization of ERG25, the Saccharomyces cerevisiae
            gene encoding C-4 sterol methyl oxidase
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 186-190 (1996)
   PUBMED   8552601
REFERENCE   6  (residues 1 to 218)
  AUTHORS   Aarts,M.G., Keijzer,C.J., Stiekema,W.J. and Pereira,A.
  TITLE     Molecular characterization of the CER1 gene of arabidopsis involved
            in epicuticular wax biosynthesis and pollen fertility
  JOURNAL   Plant Cell 7 (12), 2115-2127 (1995)
   PUBMED   8718622
REFERENCE   7  (residues 1 to 218)
  AUTHORS   Arthington,B.A., Bennett,L.G., Skatrud,P.L., Guynn,C.J.,
            Barbuch,R.J., Ulbright,C.E. and Bard,M.
  TITLE     Cloning, disruption and sequence of the gene encoding yeast C-5
            sterol desaturase
  JOURNAL   Gene 102 (1), 39-44 (1991)
   PUBMED   1864507
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016041.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04116.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Corallococcus exiguus"
                     /db_xref="taxon:83462"
     Protein         1..218
                     /product="sterol desaturase family protein"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_process="GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=24562
     Region          <44..186
                     /region_name="FA_hydroxylase"
                     /note="Fatty acid hydroxylase; cl01132"
                     /db_xref="CDD:412761"
ORIGIN      
        1 mfenafmeaa sklhpavpvl lyipltlgll gwglsggrts vgrvllfipl glltwvvmey
       61 cihrfffhwe gkgrltqrvh eiahgyhhky pddsqrlvmp livtiplssl iggllwmvgr
      121 paqmlpyfvg ivwgyvtydt lhwathhrtp ktawgralra hhmahhfatp drnfgisnrw
      181 mdmlmgsggr qaplprppsp erpskpprsp pdratagr
//
LOCUS       WP_257979076             431 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Corallococcus exiguus].
ACCESSION   WP_257979076
VERSION     WP_257979076.1
KEYWORDS    RefSeq.
SOURCE      Corallococcus exiguus
  ORGANISM  Corallococcus exiguus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Corallococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Corallococcus exiguus"
                     /db_xref="taxon:83462"
     Protein         1..431
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44857
     Region          27..368
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(34,36,39..40,43,74,129..130,132..134,137,153,
                     156..157,160,246,249..250,253..255,261,285,289,356..357,
                     361,365)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 msplieqeta lpatasaeep rwawpplfgl levqfgaavg ylqtavpywl akdgmplaei
       61 gvlsgtafsp hawkllwvpl idlgpwrrvw ygvstlltal lllacamfpe parhlgvftl
      121 lltalqaaat tahaalnglm attskpsdkg rtggwqmagn vgstammgal aiflatqfsr
      181 qvagivlatl vlasgagifw iterhdpstv ptgpllkaav drvksivmdl vktafsrdgl
      241 imlvlclapv scgalsnlfs amagayqvpe htvemvngpg mavtgavgsl mggwlsdrmn
      301 rklayalmgg atamcafama agpmttdtyi wgslaysfan gagfaafagm vlemvndgaa
      361 vttkyslfva asnfaisytt aldghasefr gigtratiaa dglitlvgis ivalifvlfl
      421 rkkpaavaat a
//
LOCUS       WP_257979084             306 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Corallococcus exiguus].
ACCESSION   WP_257979084
VERSION     WP_257979084.1
KEYWORDS    RefSeq.
SOURCE      Corallococcus exiguus
  ORGANISM  Corallococcus exiguus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Corallococcus.
REFERENCE   1  (residues 1 to 306)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 306)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Corallococcus exiguus"
                     /db_xref="taxon:83462"
     Protein         1..306
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=33822
     Region          56..244
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(97,99,101..102,179..180,196,233)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 mrmilaatla avlwgcgatq pvvethyrsr slqeqgdlrv geyissqwsl qtasywiegp
       61 eglvlidtql lpsalrkela fakdvtgkea klaivlhanp esfngtallk elgvtvvtsg
      121 pvreripavh ekwapslfkq ywngryprel vladsfgdst relsaagvtl kvhvlgagss
      181 aahvvveweg hlftgdlvar dthtwfeggd ttewlqrlde lralkpkwih pgrglpggpe
      241 lldaqtayvq avreevtrer rsehpsgdpl aaveaklker ypghayarll phlvraewar
      301 qaprrp
//
LOCUS       WP_257979111             236 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Corallococcus exiguus].
ACCESSION   WP_257979111
VERSION     WP_257979111.1
KEYWORDS    RefSeq.
SOURCE      Corallococcus exiguus
  ORGANISM  Corallococcus exiguus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Corallococcus.
REFERENCE   1  (residues 1 to 236)
  AUTHORS   Gao,G., Nara,T., Nakajima-Shimada,J. and Aoki,T.
  TITLE     Novel organization and sequences of five genes encoding all six
            enzymes for de novo pyrimidine biosynthesis in Trypanosoma cruzi
  JOURNAL   J Mol Biol 285 (1), 149-161 (1999)
   PUBMED   9878395
REFERENCE   2  (residues 1 to 236)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
REFERENCE   3  (residues 1 to 236)
  AUTHORS   Nygaard,P., Duckert,P. and Saxild,H.H.
  TITLE     Role of adenine deaminase in purine salvage and nitrogen metabolism
            and characterization of the ade gene in Bacillus subtilis
  JOURNAL   J Bacteriol 178 (3), 846-853 (1996)
   PUBMED   8550522
REFERENCE   4  (residues 1 to 236)
  AUTHORS   Lollier,M., Jaquet,L., Nedeva,T., Lacroute,F., Potier,S. and
            Souciet,J.L.
  TITLE     As in Saccharomyces cerevisiae, aspartate transcarbamoylase is
            assembled on a multifunctional protein including a
            dihydroorotase-like cryptic domain in Schizosaccharomyces pombe
  JOURNAL   Curr Genet 28 (2), 138-149 (1995)
   PUBMED   8590465
REFERENCE   5  (residues 1 to 236)
  AUTHORS   Jabri,E., Carr,M.B., Hausinger,R.P. and Karplus,P.A.
  TITLE     The crystal structure of urease from Klebsiella aerogenes
  JOURNAL   Science 268 (5213), 998-1004 (1995)
   PUBMED   7754395
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01979.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Corallococcus exiguus"
                     /db_xref="taxon:83462"
     Protein         1..236
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=25693
     Region          <1..230
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
ORIGIN      
        1 mdvlivthvv grrghgavle elgregllge dneyihvsgl egdapwkwmk dteggisiaa
       61 piemtmrhgm pplekvlafg lqpslsvdve ctmtadfftq mrtvytlqra lvneralrge
      121 kdlppmltcr dvlrfatveg araahlskrv gtltpgkead lillrtdaln vaplnnalga
      181 vvtlleqsnv dtvivagqvr kwrgalvgvd laglrqrvta srdflfetsg vprrlf
//
LOCUS       WP_257979156            1466 aa            linear   BCT 02-MAR-2025
DEFINITION  discoidin domain-containing protein [Corallococcus exiguus].
ACCESSION   WP_257979156
VERSION     WP_257979156.1
KEYWORDS    RefSeq.
SOURCE      Corallococcus exiguus
  ORGANISM  Corallococcus exiguus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Corallococcus.
REFERENCE   1  (residues 1 to 1466)
  AUTHORS   Baumgartner,S., Hofmann,K., Chiquet-Ehrismann,R. and Bucher,P.
  TITLE     The discoidin domain family revisited: new members from prokaryotes
            and a homology-based fold prediction
  JOURNAL   Protein Sci 7 (7), 1626-1631 (1998)
   PUBMED   9684896
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012956.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00754.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1466
                     /organism="Corallococcus exiguus"
                     /db_xref="taxon:83462"
     Protein         1..1466
                     /product="discoidin domain-containing protein"
                     /calculated_mol_wt=157255
     Region          21..138
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
     Region          159..274
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
     Region          575..>916
                     /region_name="BglX"
                     /note="Periplasmic beta-glucosidase and related
                     glycosidases [Carbohydrate transport and metabolism];
                     COG1472"
                     /db_xref="CDD:441081"
     Region          888..1098
                     /region_name="Glyco_hydro_3_C"
                     /note="Glycosyl hydrolase family 3 C-terminal domain;
                     pfam01915"
                     /db_xref="CDD:396478"
     Region          1305..1421
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
ORIGIN      
        1 mvvsllgasd araqtnvaln kttytssaea pflgqyavdg dggtrwasgf tanewitvdl
       61 gqtrtisrvv ltwepayatv ykiqvstnnt tftdaltvnt gdgatddlsl pagttgryvr
      121 mqgvtralpa ygyslwefav yetggtpppt ntdlarnrpa tassveadaa glqpgfafdn
      181 dintrwasaq gvdpqwirvd lgssqvvgkv vldwegaygk tytidgsnnd tswttlntvt
      241 ngaigrreip vsgtyryirm rgtergtgyg yslwsfevyq nggttppptq ttnqtiklnf
      301 pelayakinv spaplsvtpv peegnttpsv rnppgpftyq ltfppnttvt lsknqfsptq
      361 pntdirlavv dyngvqqraq svtalavqga dwnveifstg ngptdprdpt iipdpyvapa
      421 plavagafrl aapgnnamvt atrrptlswa tvtgatnykv yvnltrndyd wmaagnlldr
      481 ytqvasqtgt sftftedlpd rwtykwyvva tlsggstsrs digtfsvylp vvetqadgvn
      541 lingvrdlnk ngtiepyedw hnpisvrvnd llgrmtlrek alqmfydakt ypeagfqmgp
      601 lsptdipmfq kasaatrlgi phidagdtih gyktswptqp alaatrdldt iyemgdiqrr
      661 eqlaigsrgt lsplaevntk vlyprtqegn gedadlaagi traliaglqg gpevnpssiw
      721 vttkhwpgqg aggeagityd gttihyhmrp whaaieagts gimpgyagsw llgpegygag
      781 dnpgilnylr nqlkydgvic sdwlpsgswv rsatagsdvm ggatpqaman fenevpvari
      841 ndsvrrildl kfrlgifedp ykqgpagtsq whtadskaav rrasqeamtl lkndgalpir
      901 lpaggklvia gpraddmscm vtwrsdfhgn efgdptiyaa vkaraeaagl tvykdnapag
      961 vtpdaaivvv gesyfthgte wdkekpylpg dpigpahdak wgdqygiins fksrgipttv
     1021 vlisprpyvl tnvvplsnal mlayrpgdmg gyavadvlfg dvlprgktpw qlprgmnqig
     1081 tdvennqlek wdlpfdlgat daertairqk iaagqpvppt ygnplyqyga giqgfgltda
     1141 tppvafnllt psnnlvitgt rpaftwaass dpqtgiqrye vyldggampv aitktpsaal
     1201 dglklangvh twfvkafnwa ngvtqsptft ftlndttppa afaalspsag qsvpgtstrf
     1261 iweqttdvga gvaeyvlivd gtdrgpsilr stpvpagtnl argknayats vefgsandav
     1321 dgslatrwss vgtattgdte sitidlgaiy slkrivlnwe aaygrryvle ssldgstnwt
     1381 alrtvdtgdg giddwtvagv grfvrmrgvq rataygyslw efevygvgte qttlnglstg
     1441 shtwrvravd gannttlssg pitftk
//
LOCUS       WP_257979182             142 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Corallococcus exiguus].
ACCESSION   WP_257979182
VERSION     WP_257979182.1
KEYWORDS    RefSeq.
SOURCE      Corallococcus exiguus
  ORGANISM  Corallococcus exiguus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Corallococcus.
REFERENCE   1  (residues 1 to 142)
  AUTHORS   Davies,D.R., Mahnke Braam,L., Reznikoff,W.S. and Rayment,I.
  TITLE     The three-dimensional structure of a Tn5 transposase-related
            protein determined to 2.9-A resolution
  JOURNAL   J Biol Chem 274 (17), 11904-11913 (1999)
   PUBMED   10207011
REFERENCE   2  (residues 1 to 142)
  AUTHORS   DasSarma,S.
  TITLE     Identification and analysis of the gas vesicle gene cluster on an
            unstable plasmid of Halobacterium halobium
  JOURNAL   Experientia 49 (6-7), 482-486 (1993)
   PUBMED   8335077
REFERENCE   3  (residues 1 to 142)
  AUTHORS   Ferrante,A.A. and Lessie,T.G.
  TITLE     Nucleotide sequence of IS402 from Pseudomonas cepacia
  JOURNAL   Gene 102 (1), 143-144 (1991)
   PUBMED   1650732
REFERENCE   4  (residues 1 to 142)
  AUTHORS   De Meirsman,C., Van Soom,C., Verreth,C., Van Gool,A. and
            Vanderleyden,J.
  TITLE     Nucleotide sequence analysis of IS427 and its target sites in
            Agrobacterium tumefaciens T37
  JOURNAL   Plasmid 24 (3), 227-234 (1990)
   PUBMED   1963949
REFERENCE   5  (residues 1 to 142)
  AUTHORS   Sato,S., Nakada,Y. and Shiratsuchi,A.
  TITLE     IS421, a new insertion sequence in Escherichia coli
  JOURNAL   FEBS Lett 249 (1), 21-26 (1989)
   PUBMED   2542093
REFERENCE   6  (residues 1 to 142)
  AUTHORS   Kroger,M. and Hobom,G.
  TITLE     Structural analysis of insertion sequence IS5
  JOURNAL   Nature 297 (5862), 159-162 (1982)
   PUBMED   6281654
REFERENCE   7  (residues 1 to 142)
  AUTHORS   Klaer,R., Kuhn,S., Tillmann,E., Fritz,H.J. and Starlinger,P.
  TITLE     The sequence of IS4
  JOURNAL   Mol Gen Genet 181 (2), 169-175 (1981)
   PUBMED   6268937
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01609.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Corallococcus exiguus"
                     /db_xref="taxon:83462"
     Protein         1..142
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=16067
     Region          <16..121
                     /region_name="transpos_IS4_2"
                     /note="IS4 family transposase; NF033591"
                     /db_xref="CDD:468100"
ORIGIN      
        1 msgrragtap slteataqqv ldvyarrftv eetfrdvkdl kfgmglkqvr vktperrdrl
       61 llisalaqvl ltllgaagea lgydkhlrvn tvkrrthslf tqgayyfmam prmsderlrp
      121 lverfgqlvr ehavfreafg li
//
LOCUS       WP_257979225             475 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Corallococcus exiguus].
ACCESSION   WP_257979225
VERSION     WP_257979225.1
KEYWORDS    RefSeq.
SOURCE      Corallococcus exiguus
  ORGANISM  Corallococcus exiguus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Corallococcus.
REFERENCE   1  (residues 1 to 475)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 475)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Corallococcus exiguus"
                     /db_xref="taxon:83462"
     Protein         1..475
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=49512
     Region          273..443
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(283,316,419,422)
                     /site_type="active"
                     /db_xref="CDD:238863"
ORIGIN      
        1 megqpsaspe saatgagssq vvpasanlpa qapgkarpta rsafralppt teraghlhal
       61 atrlqapggm vedpclekdd agcarsaltp fftaldglvq tpgttptvia afgnsliagd
      121 rivdvvreef aagfggagrg vllvdrmapy ggrgrtaavs ngweprtlge lkapphpfgi
      181 tgvyhlaten rargrfkleg eprgtlwwkd vkgagrlvvs vdgtvltrte pqedgasrtt
      241 sfdlpagakw ldvtaegkga ivqgvvlqkd asgivldmlg vpsadatlyg rleedalkaq
      301 lsqrdpklll fflggneskr lewkrtdlpt vrqdltallr rtraaapgsa clvvgpmdav
      361 qdahakgkpl tqrpfleaai qaerevalae gcgffdlyta mggagslarf nqagfmhedl
      421 vhprghgldl lgqlvsdall agwvnegavp apalttsree asdtgassqt aeavp
//
LOCUS       WP_257978883             172 aa            linear   BCT 02-MAR-2025
DEFINITION  endonuclease V [Corallococcus exiguus].
ACCESSION   WP_257978883
VERSION     WP_257978883.1
KEYWORDS    RefSeq.
SOURCE      Corallococcus exiguus
  ORGANISM  Corallococcus exiguus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Corallococcus.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Guo,G., Ding,Y. and Weiss,B.
  TITLE     nfi, the gene for endonuclease V in Escherichia coli K-12
  JOURNAL   J Bacteriol 179 (2), 310-316 (1997)
   PUBMED   8990280
REFERENCE   2  (residues 1 to 172)
  AUTHORS   Demple,B., Gates,F.T. 3rd and Linn,S.
  TITLE     Purification and properties of Escherichia coli
            endodeoxyribonuclease V
  JOURNAL   Methods Enzymol 65 (1), 224-231 (1980)
   PUBMED   6246346
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04493.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Corallococcus exiguus"
                     /db_xref="taxon:83462"
     Protein         1..172
                     /product="endonuclease V"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_process="GO:0006281 - DNA repair [Evidence IEA]"
                     /calculated_mol_wt=18698
     Region          2..171
                     /region_name="Nfi"
                     /note="Deoxyinosine 3'-endonuclease (endonuclease V)
                     [Replication, recombination and repair]; COG1515"
                     /db_xref="CDD:441124"
ORIGIN      
        1 mgspkenrml acvdvdyrpd vtvaacvlfr gwtdakeagh lvdrgpiaap yepgqfyrre
       61 lphllrvlad vqepleaivv dgyvwlgenv pglgahlyea lcrtvpvigv aktpyvttgp
      121 alpivrggsl rpllvtaigm etataaehir rmhgssrlpt mlkfvdrlcr es
//
LOCUS       WP_257979351             381 aa            linear   BCT 02-MAR-2025
DEFINITION  BTAD domain-containing putative transcriptional regulator
            [Corallococcus exiguus].
ACCESSION   WP_257979351
VERSION     WP_257979351.1
KEYWORDS    RefSeq.
SOURCE      Corallococcus exiguus
  ORGANISM  Corallococcus exiguus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Corallococcus.
REFERENCE   1  (residues 1 to 381)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015649.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03704.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Corallococcus exiguus"
                     /db_xref="taxon:83462"
     Protein         1..381
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /calculated_mol_wt=40351
     Region          1..>159
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          38..63
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(39..40,43..44,46,70,73..74,77..78,80..81,97,
                     100..101,104..105,108)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          68..95
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <154..380
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
ORIGIN      
        1 mnasarhgsa arrllahgsd tdaetpmser esmklrdlke aahalyqrgr yaqcvetyaq
       61 lakmlprdan vrvrlaeacr ragqkeqaia ayrkaarvll slgcesrarg alkaalelap
      121 rdaalqqela rmgqgavtpt aledeelyrf drlpptpppg rmrsvppsfv rndaqgpdap
      181 ralpvapsvt pvnvhgtpsv mqgpgrqavl phprpamptv tpaldsattt msrsmaqvaa
      241 gapeavtlpk vivsmfafgd ppaegaaqpg gntppcitpv mvsksvpkka lpavppstvn
      301 paptperptv kvlalknrap gapptkppsa vmpykpemrr lapnvvalrv spqarwviir
      361 sesdlevsrs evlpgepaaa h
//
LOCUS       WP_257979364             217 aa            linear   BCT 02-MAR-2025
DEFINITION  CAP domain-containing protein [Corallococcus exiguus].
ACCESSION   WP_257979364
VERSION     WP_257979364.1
KEYWORDS    RefSeq.
SOURCE      Corallococcus exiguus
  ORGANISM  Corallococcus exiguus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Corallococcus.
REFERENCE   1  (residues 1 to 217)
  AUTHORS   Gibbs,G.M., Roelants,K. and O'Bryan,M.K.
  TITLE     The CAP superfamily: cysteine-rich secretory proteins, antigen 5,
            and pathogenesis-related 1 proteins--roles in reproduction, cancer,
            and immune defense
  JOURNAL   Endocr Rev 29 (7), 865-897 (2008)
   PUBMED   18824526
REFERENCE   2  (residues 1 to 217)
  AUTHORS   Milne,T.J., Abbenante,G., Tyndall,J.D., Halliday,J. and Lewis,R.J.
  TITLE     Isolation and characterization of a cone snail protease with
            homology to CRISP proteins of the pathogenesis-related protein
            superfamily
  JOURNAL   J Biol Chem 278 (33), 31105-31110 (2003)
   PUBMED   12759345
REFERENCE   3  (residues 1 to 217)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
REFERENCE   4  (residues 1 to 217)
  AUTHORS   Fernandez,C., Szyperski,T., Bruyere,T., Ramage,P., Mosinger,E. and
            Wuthrich,K.
  TITLE     NMR solution structure of the pathogenesis-related protein P14a
  JOURNAL   J Mol Biol 266 (3), 576-593 (1997)
   PUBMED   9067611
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012415.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00188.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Corallococcus exiguus"
                     /db_xref="taxon:83462"
     Protein         1..217
                     /product="CAP domain-containing protein"
                     /calculated_mol_wt=23075
     Region          70..217
                     /region_name="CAP"
                     /note="CAP (cysteine-rich secretory proteins, antigen 5,
                     and pathogenesis-related 1 proteins) domain family;
                     cl00133"
                     /db_xref="CDD:412178"
ORIGIN      
        1 malpvfrrgl avlllapllg cgssanaqrp vsastkkaaa taaarkanta tpaptegtrk
       61 pvptaaelkr dmvaahnear skasrptpkp alpaltwsde aarkaeayvk ecrfehnpdr
      121 gtfgenlaaa tpdtwntaqv vkgwadesad ydyasgkcka gkmcghytqv vwrttkavgc
      181 atqlctknsp fggnvktwql wvcnyappgn wvgekpy
//
LOCUS       WP_257979395             221 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaJ domain-containing protein, partial [Corallococcus exiguus].
ACCESSION   WP_257979395
VERSION     WP_257979395.1
KEYWORDS    RefSeq.
SOURCE      Corallococcus exiguus
  ORGANISM  Corallococcus exiguus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Corallococcus.
REFERENCE   1  (residues 1 to 221)
  AUTHORS   Kelley,W.L.
  TITLE     The J-domain family and the recruitment of chaperone power
  JOURNAL   Trends Biochem Sci 23 (6), 222-227 (1998)
   PUBMED   9644977
REFERENCE   2  (residues 1 to 221)
  AUTHORS   Stubdal,H., Zalvide,J., Campbell,K.S., Schweitzer,C., Roberts,T.M.
            and DeCaprio,J.A.
  TITLE     Inactivation of pRB-related proteins p130 and p107 mediated by the
            J domain of simian virus 40 large T antigen
  JOURNAL   Mol Cell Biol 17 (9), 4979-4990 (1997)
   PUBMED   9271376
REFERENCE   3  (residues 1 to 221)
  AUTHORS   Pellecchia,M., Szyperski,T., Wall,D., Georgopoulos,C. and
            Wuthrich,K.
  TITLE     NMR structure of the J-domain and the Gly/Phe-rich region of the
            Escherichia coli DnaJ chaperone
  JOURNAL   J Mol Biol 260 (2), 236-250 (1996)
   PUBMED   8764403
REFERENCE   4  (residues 1 to 221)
  AUTHORS   Cyr,D.M., Langer,T. and Douglas,M.G.
  TITLE     DnaJ-like proteins: molecular chaperones and specific regulators of
            Hsp70
  JOURNAL   Trends Biochem Sci 19 (4), 176-181 (1994)
   PUBMED   8016869
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012451.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00226.36
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Corallococcus exiguus"
                     /db_xref="taxon:83462"
     Protein         <1..221
                     /product="DnaJ domain-containing protein"
     Region          36..>172
                     /region_name="PTZ00037"
                     /note="DnaJ_C chaperone protein; Provisional"
                     /db_xref="CDD:240236"
     Region          53..>120
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
ORIGIN      
        1 gsprpptpap vapprppaas tpppppaaag gpalspeqla dlesrcakld qldyfellgl
       61 ertavpgdik kafykesrvy hpdrffhles kalkdqvnel ykrvteayyv lrddtkrkky
      121 lsdiagpdra qklrftdase setkaaakke qeeqigthpk grqfytqaqk dlesgnpsaa
      181 ernlkmalty epanarykea laeaqkqtad kskgdssfki r
//
LOCUS       WP_257979428             721 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257979428
VERSION     WP_257979428.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 721)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..721
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=78195
     Region          <27..76
                     /region_name="Cornifin"
                     /note="Cornifin (SPRR) family; pfam02389"
                     /db_xref="CDD:280537"
     Region          <69..>172
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          342..416
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); cl02708"
                     /db_xref="CDD:445894"
     Region          <611..687
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllltslfg cnsdsgsrts qppmslpeev lpdepeieap ipelpvpefp diskpevpet
       61 pevtlpepsd svipeppvpd kvvsrialnq srvslaegel aqvkvigfyn dgtqddltsq
      121 vvwnvenadi vnidergvit alktgvsvir adldefssem tvqvvdaklt niyfdlphka
      181 iakglsfqak aygeytdkqt rdishlvewd stdysvvmpg tngiftaqde gdadiyaeld
      241 gltsthgsit vmpavlvsmd isstalempl gthkplvvmg tlsdgeqvdl trgitwhadn
      301 dvaeivdnvv kakhkgtalv taaldgvqse piqvqvtdai ltnievttna ssvakgnstl
      361 lsaqgvysde srvelteqva wwvdnqdvlq legdrvkgla vgqamvyatk daitsaplqi
      421 qvtnavleki hvhpseitle eknvqrfyay geysdettqd vthrvtwrss nkavldliag
      481 glsnsaqlgs vsisaslgel kgtsevkvve aeekesaisi cpqprsgegs aeaclmvasd
      541 edgrlftapp svklmnklgy elvkplsyda tkpktyvgik tedgtrgpvg dfamfnqygr
      601 dragltsqya nwchdlsvrn fagrdnwrra trnelfslyr asrgsvwdgt esiyeedkdg
      661 ggfgwpanse ywstslmdlp yhegvvydii nlhrgraqlv mdardpayas cvsdapgvpl
      721 k
//
LOCUS       WP_257979448              66 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3693 domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257979448
VERSION     WP_257979448.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023888.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12472.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..66
                     /product="DUF3693 domain-containing protein"
                     /calculated_mol_wt=7137
     Region          <1..66
                     /region_name="DUF3693"
                     /note="Phage related protein; cl22943"
                     /db_xref="CDD:451460"
ORIGIN      
        1 makkfdrlgl ssisitcael alviaspqep lcqcalwalm lnaiayaypi kclsfegqfn
       61 evsrnd
//
LOCUS       WP_257979456             134 aa            linear   BCT 02-MAR-2025
DEFINITION  winged helix-turn-helix transcriptional regulator, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257979456
VERSION     WP_257979456.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024804.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13412.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>134
                     /product="winged helix-turn-helix transcriptional
                     regulator"
     Region          9..134
                     /region_name="parB_part"
                     /note="ParB/RepB/Spo0J family partition protein;
                     TIGR00180"
                     /db_xref="CDD:272946"
ORIGIN      
        1 madaisdsar llnslefqqf ypavsrqidg kidvldgsrr rawfllqggr vktfrilvtq
       61 neisvsdaka lakqlqtake hnlreigqqc iviksaneei tqaeiakqvg lsqagvskam
      121 kaasideklv klfp
//
LOCUS       WP_257979458             360 aa            linear   BCT 02-MAR-2025
DEFINITION  replication initiation factor domain-containing protein, partial
            [Vibrio parahaemolyticus].
ACCESSION   WP_257979458
VERSION     WP_257979458.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 360)
  AUTHORS   Li,A.H., Silvestrini,B., Leone,M.G., Giacomelli,S. and Cheng,C.Y.
  TITLE     Cerebrin-50, a human cerebrospinal fluid protein whose mRNA is
            present in multiple tissues but predominantly expressed in the
            lymphoblastoid cells and the brain
  JOURNAL   Biochem Mol Biol Int 35 (1), 135-144 (1995)
   PUBMED   7735128
REFERENCE   2  (residues 1 to 360)
  AUTHORS   Balson,D.F. and Shaw,W.V.
  TITLE     Nucleotide sequence of the rep gene of staphylococcal plasmid pCW7
  JOURNAL   Plasmid 24 (1), 74-80 (1990)
   PUBMED   2270231
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014537.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02486.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>360
                     /product="replication initiation factor domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
     Region          1..360
                     /region_name="PHA00202"
                     /note="DNA replication initiation protein"
                     /db_xref="CDD:164786"
ORIGIN      
        1 mttatnilks fdeqsvhidy lcftfavkdl rhchdavrrl hkheeykgfa ksgllqrhcr
       61 apkfpappvf nptvaqtsde idaynkafdi cyrnyledcl riftnqvlgl slsaprglgf
      121 qfytesmklt spdgedfcgf vgiggnndtv hfqingtgck hvfarrptws lhdwltnvlg
      181 vqtlarvdla yddydgifdc eyaykawrdd cfrtaergrg pvlhedmtia sigkdgkpiy
      241 tkeqysigsr tsriywriyn kaleqklant gliwyrseve lkkwnvdvll npagayaaln
      301 dfaasistak kfntkpvptk raaldllasa hwmrrqygki lnsliefheg dietvvgslv
//
LOCUS       WP_257979461             206 aa            linear   BCT 02-MAR-2025
DEFINITION  PEP/pyruvate-binding domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257979461
VERSION     WP_257979461.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 206)
  AUTHORS   Lim,K., Read,R.J., Chen,C.C., Tempczyk,A., Wei,M., Ye,D., Wu,C.,
            Dunaway-Mariano,D. and Herzberg,O.
  TITLE     Swiveling domain mechanism in pyruvate phosphate dikinase
  JOURNAL   Biochemistry 46 (51), 14845-14853 (2007)
   PUBMED   18052212
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01326.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>206
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0016310 - phosphorylation [Evidence IEA]"
     Region          <1..>206
                     /region_name="PRK06464"
                     /note="phosphoenolpyruvate synthase; Validated; cl42504"
                     /db_xref="CDD:455849"
ORIGIN      
        1 emvvqgavnp defyvhkpml eagehpivkk tfgsklikmi ysnnqeigkq vdiidtseee
       61 rntfslneee ikelakqami iekhyqrpmd iewakdgidg klyivqarpe tvcsqteqnv
      121 ieryelnnka dvlvegraig qrigkgpvrl vdsldqmslv qegdvlvtdm tdpdwepvmk
      181 kasaivtnrg grtchaaiia relgip
//
LOCUS       WP_257979548             114 aa            linear   BCT 02-MAR-2025
DEFINITION  chemotaxis protein CheW [Corallococcus exiguus].
ACCESSION   WP_257979548
VERSION     WP_257979548.1
KEYWORDS    RefSeq.
SOURCE      Corallococcus exiguus
  ORGANISM  Corallococcus exiguus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Corallococcus.
REFERENCE   1  (residues 1 to 114)
  AUTHORS   Bilwes,A.M., Alex,L.A., Crane,B.R. and Simon,M.I.
  TITLE     Structure of CheA, a signal-transducing histidine kinase
  JOURNAL   Cell 96 (1), 131-141 (1999)
   PUBMED   9989504
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013731.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01584.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Corallococcus exiguus"
                     /db_xref="taxon:83462"
     Protein         1..114
                     /product="chemotaxis protein CheW"
                     /GO_process="GO:0006935 - chemotaxis [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=11645
     Region          8..>35
                     /region_name="CheW_like"
                     /note="CheW-like domain. CheW proteins are part of the
                     chemotaxis signalling mechanism in bacteria. CheW
                     interacts with the methyl accepting chemotaxis proteins
                     (MCPs) and relays signals to CheY, which affects flageller
                     rotation. This family includes CheW and...; cl00256"
                     /db_xref="CDD:469692"
ORIGIN      
        1 mvqmesftga tpvpgapahv aglvqvrgrv ipvvdaaaeg lpcpprarar apgpprhpap
       61 tgqrasaava eprrppgaar ahpplrprar rahrrraalp paahgftslg ktda
//
LOCUS       WP_257979614             129 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Corallococcus
            exiguus].
ACCESSION   WP_257979614
VERSION     WP_257979614.1
KEYWORDS    RefSeq.
SOURCE      Corallococcus exiguus
  ORGANISM  Corallococcus exiguus
            Bacteria; Pseudomonadati; Myxococcota; Myxococcia; Myxococcales;
            Cystobacterineae; Myxococcaceae; Corallococcus.
REFERENCE   1  (residues 1 to 129)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Corallococcus exiguus"
                     /db_xref="taxon:83462"
     Protein         <1..>129
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..129
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            11..44
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 itgvidsiaf qtnilalnaa veaarageqg rgfavvaaev rtlaqrsaaa akeikeligs
       61 svervesgsr lvgqagatmt eivdsvrrvs emiseitass aeqsdnigqi sqsvsqldqm
      121 tqqnaalve
//
LOCUS       WP_257979629             604 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257979629
VERSION     WP_257979629.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>604
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          <202..540
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq plpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnaendvit teedtavtid vlvndsdveg dalsiqsasv pseqgsvdiv
      301 dgklvftpae nfngeatity ivtdgdltde akvtvtvtpv ndspvavddt tsiqedtavt
      361 idvltndtdv dgdklsiesa svpkeqgtve vvdgklvftp venfnghaei tytvtdgqlt
      421 deakvtvtvn pvndaptikv davesiteda vstdtvvatl tvrdtdtped rltvslenns
      481 ngyfvlvgde vkltqagvda vnndelnlkd ltisasvsdg vnptandsds lvvnrvndap
      541 tvenaiadqv lsedfdayti dlnevfkdsd sslefsvsgn nsiqisivng vatitptadw
      601 ngke
//
LOCUS       WP_257979661              72 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Vibrio parahaemolyticus].
ACCESSION   WP_257979661
VERSION     WP_257979661.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 72)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 72)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>72
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          1..>72
                     /region_name="VgrG"
                     /note="Uncharacterized conserved protein VgrG, implicated
                     in type VI secretion and phage assembly [Intracellular
                     trafficking, secretion, and vesicular transport, Mobilome:
                     prophages, transposons, General function prediction only];
                     COG3501"
                     /db_xref="CDD:442724"
ORIGIN      
        1 qgvgtarqfn gciselrylg sgrrfsryhi tlvphlwflt qrqdcrifqm qaapdiirqv
       61 fddagmsdyr fe
//
LOCUS       WP_257979727              43 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar phosphate nucleotidyltransferase, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257979727
VERSION     WP_257979727.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 43)
  AUTHORS   Jensen,S.O. and Reeves,P.R.
  TITLE     Domain organisation in phosphomannose isomerases (types I and II)
  JOURNAL   Biochim Biophys Acta 1382 (1), 5-7 (1998)
   PUBMED   9507048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012695.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00483.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..43
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>43
                     /product="sugar phosphate nucleotidyltransferase"
                     /GO_function="GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          1..>43
                     /region_name="RmlA1"
                     /note="dTDP-glucose pyrophosphorylase [Cell
                     wall/membrane/envelope biogenesis]; COG1209"
                     /db_xref="CDD:440822"
ORIGIN      
        1 mkgiilaggs gtrlypitrg vskqllpvyd kpmiyyplsv lml
//
LOCUS       WP_257979741             106 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257979741
VERSION     WP_257979741.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 106)
  AUTHORS   Xiong,Y. and Eickbush,T.H.
  TITLE     Origin and evolution of retroelements based upon their reverse
            transcriptase sequences
  JOURNAL   EMBO J 9 (10), 3353-3362 (1990)
   PUBMED   1698615
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00078.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>106
                     /product="reverse transcriptase domain-containing protein"
     Region          <1..>106
                     /region_name="retron_Ec67_fus"
                     /note="retron Ec67 family RNA-directed DNA
                     polymerase/endonuclease; NF038237"
                     /db_xref="CDD:468424"
ORIGIN      
        1 ffasfnfgrv rgffiknknf elepdiatvi aqiachnnel pqgspcspvi tnlithsldi
       61 klsalaskns ctytryaddi tfstrkkefp idiarkkgeq fisgkk
//
LOCUS       WP_257979770             190 aa            linear   BCT 02-MAR-2025
DEFINITION  imm11 family protein [Vibrio parahaemolyticus].
ACCESSION   WP_257979770
VERSION     WP_257979770.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 190)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019408.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07791.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..190
                     /product="imm11 family protein"
                     /calculated_mol_wt=21566
ORIGIN      
        1 mkfsiiseny pisqmiytci dsreplyska qfeptsslep ivwestdgfi kgvgniadng
       61 dlcvskefae lvmsfdpygi ecypaelrlt dgslsnryll alnnvldvid epksrmrksp
      121 krnkmlvmel ylseeklnki plqnrvlfrv kgaetatifc eeifdlvsgt esfsdlrafk
      181 ldcdkevpky
//
LOCUS       WP_257979785             161 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6678 family protein [Vibrio parahaemolyticus].
ACCESSION   WP_257979785
VERSION     WP_257979785.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042561.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20383.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..161
                     /product="DUF6678 family protein"
                     /calculated_mol_wt=18848
     Region          30..152
                     /region_name="DUF6678"
                     /note="Family of unknown function (DUF6678); pfam20383"
                     /db_xref="CDD:466532"
ORIGIN      
        1 mrqhrycvlh pltgrymywe fmrldlksni iklidsnglf gvmnntkwnn lfaalsdide
       61 llsyrvtyid gstwpesdts yqytselaqi wgnfraihfi didarishsr gvllepevld
      121 hrdkviaick eqnakislte cgvriwgyfq hgkdiemyky t
//
LOCUS       WP_257979811             109 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase zinc-binding domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257979811
VERSION     WP_257979811.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14319.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>109
                     /product="transposase zinc-binding domain-containing
                     protein"
     Region          2..>109
                     /region_name="transpos_IS91"
                     /note="IS91 family transposase; NF033538"
                     /db_xref="CDD:468069"
ORIGIN      
        1 mylskhisei revvvdnvtr mmacgsssmg srlykcknsg csytknlnqt cksracsscg
       61 vksterwirq qqhvlpdcew qhitftmpst lwpifrhnrw llnrlfkca
//
LOCUS       WP_257979832             154 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar nucleotide-binding protein, partial [Aeromonas salmonicida].
ACCESSION   WP_257979832
VERSION     WP_257979832.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 154)
  AUTHORS   Blankenfeldt,W., Kerr,I.D., Giraud,M.F., McMiken,H.J., Leonard,G.,
            Whitfield,C., Messner,P., Graninger,M. and Naismith,J.H.
  TITLE     Variation on a theme of SDR. dTDP-6-deoxy-L- lyxo-4-hexulose
            reductase (RmlD) shows a new Mg2+-dependent dimerization mode
  JOURNAL   Structure 10 (6), 773-786 (2002)
   PUBMED   12057193
REFERENCE   2  (residues 1 to 154)
  AUTHORS   Giraud,M.F., Leonard,G.A., Field,R.A., Berlind,C. and Naismith,J.H.
  TITLE     RmlC, the third enzyme of dTDP-L-rhamnose pathway, is a new class
            of epimerase
  JOURNAL   Nat Struct Biol 7 (5), 398-402 (2000)
   PUBMED   10802738
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016228.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04321.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..>154
                     /product="sugar nucleotide-binding protein"
     Region          <1..154
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 gawlvhystd yvfdgsgehs wvesdqtapl nvygetklag ehaavlctrh lifrtswvya
       61 arganfartm lrfgkersem siindqfgap tgaelladct ahalriaqyk pevaglyhlv
      121 asgtttwfdy aqlvfakare agvelsvmql navp
//
LOCUS       WP_257979837             759 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar hook-length control protein FliK [Aeromonas salmonicida].
ACCESSION   WP_257979837
VERSION     WP_257979837.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 759)
  AUTHORS   Shibata,S., Takahashi,N., Chevance,F.F., Karlinsey,J.E.,
            Hughes,K.T. and Aizawa,S.
  TITLE     FliK regulates flagellar hook length as an internal ruler
  JOURNAL   Mol Microbiol 64 (5), 1404-1415 (2007)
   PUBMED   17542929
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014207.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02120.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         1..759
                     /product="flagellar hook-length control protein FliK"
                     /calculated_mol_wt=77254
     Region          <22..>250
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     Region          500..745
                     /region_name="FliK"
                     /note="Flagellar hook-length control protein FliK [Cell
                     motility]; COG3144"
                     /db_xref="CDD:442378"
     Region          622..696
                     /region_name="T3SS_Flik_C"
                     /note="C-terminal domain of flagellar hook-length control
                     protein FliK and similar domains; cd17470"
                     /db_xref="CDD:350657"
ORIGIN      
        1 mmqtlltntp sasaapsadk naplisssdk gdqasqsdlk ggfseemvka qqadkatgar
       61 qgskvaageq vapdplvket vvtdkgegrk hgdaksladt tgetaatddk ekkmdeaess
      121 aspidflqrl qdalkqdtsl vspavlnlas avegdgnmlp qegeatasad alaldgkqgd
      181 gkqaapgeaa llaqqaasll kgadagaaaa ndetpatetv dgdtsaamav elkgdekgkd
      241 tasadkggka alsdaertal lskvlptegv dkapkgegen pveadgnpkp aippmghkeg
      301 aekpsplhtm nqavpaqaga xrafeeglgr axsgtttsiy tvdtsvamaa elkgdekgkd
      361 tasadkggka alsgvertal lnkvlpteav ekvakgegnn pveadgssks aippmghkeg
      421 aekpsplhtm sqglpaqaga xrafeeglgr axsgtttstd aaqtqavtek geqakaapaa
      481 ksdsqavass mataaqttpv ahaaepvlta pqqalasses qgpqaslnal saglkqmeas
      541 dapktkadvk ldvkqkvael grnsalgtes ttqdnnhsqq vqqnsqpqav nndskpttdi
      601 sarrdpqhla hlklaspetp vqlhqkvnlm ltdklqqaei qldplglgkm kiqiqmgadn
      661 qanvhfvvqh gqtremleqa mprlrdmlag qgiqlgqtlv qqqpqqqsqg qsafsgqgqs
      721 gqngsgsfse tgqteaevta agsrlsmest ndagidfya
//
LOCUS       WP_257979850             317 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Aeromonas salmonicida].
ACCESSION   WP_257979850
VERSION     WP_257979850.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 317)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..317
                     /product="AMP-binding protein"
     Region          <2..302
                     /region_name="MenE/FadK"
                     /note="O-succinylbenzoic acid-CoA ligase MenE or related
                     acyl-CoA synthetase (AMP-forming) [Lipid transport and
                     metabolism]; COG0318"
                     /db_xref="CDD:440087"
ORIGIN      
        1 tlfssgstge pkaipkawpq leaelrvqma lwgqalaetr vlasvshqhi ygllfrillp
       61 lalgrpfdrr sidypeqlav qtapwvlias paflsrldpa ipaagcrliv ssggplqped
      121 ahqarallgq lpveifgsse tggigwrqrq qaqtpwtplp gvevrvgpdq glllrspfla
      181 eedwlacadr ilmtgagfel lgrqdrvikl eekrisldev earlqalpev eqaavlplqq
      241 gqrqilgavl vlselgaarw aelgqgrfll alrqqlrpwl epvalprslr rvecmpvnaq
      301 gkrpwpqlke lfdeplc
//
LOCUS       WP_257979879              86 aa            linear   BCT 02-MAR-2025
DEFINITION  arginase family protein, partial [Aeromonas salmonicida].
ACCESSION   WP_257979879
VERSION     WP_257979879.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00491.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..86
                     /product="arginase family protein"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
     Region          <2..84
                     /region_name="Arginase_HDAC"
                     /note="Arginase-like and histone-like hydrolases; cl17011"
                     /db_xref="CDD:450134"
ORIGIN      
        1 gldsfiaqcd hiyltidldv lpgavmpgvs apaargvela viepliahir asgklrladl
       61 aeynpnldqd nrsarvaarl vhqltk
//
LOCUS       WP_257979882             224 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Vibrio parahaemolyticus].
ACCESSION   WP_257979882
VERSION     WP_257979882.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..224
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=24584
     Region          13..131
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(114..117,119)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 maegrvavgd inilvvddcs tssllvkhql ialgakasni tcatntqaal laaktriysf
       61 lvidyhlaek ytgldlvhll sraqlisdtt avlmissdat ketvltalss sgrvrhlltk
      121 plqtkalytk mlqalqeqqh iaavtkrlla sqplllsdvi llhkthassi cvesliidtl
      181 verrdytlle dylplcsqke havkcvrrrf cciikgtylk qskl
//
LOCUS       WP_257979959             111 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein, partial [Aeromonas salmonicida].
ACCESSION   WP_257979959
VERSION     WP_257979959.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024554.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13155.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..>111
                     /product="toprim domain-containing protein"
     Region          21..104
                     /region_name="Toprim_2"
                     /note="Toprim-like; pfam13155"
                     /db_xref="CDD:463793"
ORIGIN      
        1 wlngvqfyge eslnspgpva lvegendrls lvdagwpgpv latigtlsqt qlawlgrela
       61 drdvvtffdt deagekyrsk vaqlglkltq vklpdsvkdi deylhgdnpl p
//
LOCUS       WP_257980018              65 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6392 family protein, partial [Pectobacterium brasiliense].
ACCESSION   WP_257980018
VERSION     WP_257980018.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium brasiliense
  ORGANISM  Pectobacterium brasiliense
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040077.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19929.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Pectobacterium brasiliense"
                     /db_xref="taxon:180957"
     Protein         1..>65
                     /product="DUF6392 family protein"
     Region          1..>65
                     /region_name="DUF6392"
                     /note="Family of unknown function (DUF6392); pfam19929"
                     /db_xref="CDD:437761"
ORIGIN      
        1 mtvnvetlfh rigktyqeif deglipyktk pkgdsgdpvl dldmvkesvy lafhrssrkl
       61 fcvtl
//
LOCUS       WP_257980060             179 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family DNA-binding transcriptional regulator [Vibrio
            parahaemolyticus].
ACCESSION   WP_257980060
VERSION     WP_257980060.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012594.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00376.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..179
                     /product="MerR family DNA-binding transcriptional
                     regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=20288
     Region          4..134
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(5..7,21,38..40)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133413"
ORIGIN      
        1 mldmkigela qkmglapsri rfyerigllk tvtrkangyr eypqealmil dmittgqqag
       61 fsldelsall psdlsnwdhh qllttlqqkv qeldelerki aqsksklkev lkeieakpdd
      121 mdcamnakrv msqlgqtilt kenpsnknka vtkakqsnvn krsftldvel kirkfptch
//
LOCUS       WP_257979917             120 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme, partial [Aeromonas salmonicida].
ACCESSION   WP_257979917
VERSION     WP_257979917.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 120)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 120)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..>120
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <1..>120
                     /region_name="BioF"
                     /note="7-keto-8-aminopelargonate synthetase or related
                     enzyme [Coenzyme transport and metabolism]; COG0156"
                     /db_xref="CDD:439926"
ORIGIN      
        1 vfsmdgdqgp wlelarlaaq sgnwlmidda hglgvlgpeg rgtlaaqgva pasvhiqmgt
       61 fgkalgvaga fvggsrelvd ylvnfarhyv ysthmpaaqa cavsksialv raadesrahl
//
LOCUS       WP_257980091             103 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Pectobacterium versatile].
ACCESSION   WP_257980091
VERSION     WP_257980091.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium versatile
  ORGANISM  Pectobacterium versatile
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 103)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 103)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Pectobacterium versatile"
                     /db_xref="taxon:2488639"
     Protein         <1..>103
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          1..>103
                     /region_name="VI_Rhs_Vgr"
                     /note="type VI secretion system Vgr family protein;
                     TIGR03361"
                     /db_xref="CDD:274542"
ORIGIN      
        1 tnarifqaqk peaiigalle dagitdyafa lrnehavrey cvqyresdla fitrlaaeeg
       61 myffheyeeg khrlvfadda galtkgpelf fnlatqglse gey
//
LOCUS       WP_257980094             291 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-grasp fold amidoligase family protein [Vibrio
            parahaemolyticus].
ACCESSION   WP_257980094
VERSION     WP_257980094.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 291)
  AUTHORS   Iyer,L.M., Abhiman,S., Maxwell Burroughs,A. and Aravind,L.
  TITLE     Amidoligases with ATP-grasp, glutamine synthetase-like and
            acetyltransferase-like domains: synthesis of novel metabolites and
            peptide modifications of proteins
  JOURNAL   Mol Biosyst 5 (12), 1636-1660 (2009)
   PUBMED   20023723
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025663.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14305.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..291
                     /product="ATP-grasp fold amidoligase family protein"
                     /calculated_mol_wt=34081
     Region          45..290
                     /region_name="CPSase_L_D2"
                     /note="Carbamoyl-phosphate synthase L chain, ATP binding
                     domain; cl17255"
                     /db_xref="CDD:473076"
ORIGIN      
        1 mnrfskdivr nilrniltpk gytylrfvlt hkyipsfdep rsfsekiiyr kfneapekys
       61 klvdkftvrd yvseligtey liplikhtdn ltpcdfydlp kefviktsng gggenvkvil
      121 dssnvdkklv sdkfnkylst kmgdivdehf ydiespriif esllrhkngs lpsdykfhvf
      181 rkgsdtktiv qvdesrfvnh krslfdrdlk mlnfdiqpky pkvspdykwp enieemfsia
      241 eklsygfpyv ridlynvdgk iyfgeftfch gsgwepfstr dadfllgsyw g
//
LOCUS       WP_257980104             444 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257980104
VERSION     WP_257980104.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>444
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          248..338
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          330..417
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq prpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi iitteellsn
      181 vddedkdtls venliidkgn gtlvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnaendvit teedtavtid vlvndsdveg dvlsiqsasv pseqgsvdiv
      301 ngklvftpae nfngdatity ivtdgdltde akvtvtvtpv ndspvavddt vstqedtvvp
      361 idvlpndsdv dgdklsiqsa svpeaqgkve ivdgklvftp aenfngdaei tytvtdgelt
      421 deakvtvtvn pvndaptikv dave
//
LOCUS       WP_257980124             145 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257980124
VERSION     WP_257980124.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 145)
  AUTHORS   Clarke,T.A., Edwards,M.J., Gates,A.J., Hall,A., White,G.F.,
            Bradley,J., Reardon,C.L., Shi,L., Beliaev,A.S., Marshall,M.J.,
            Wang,Z., Watmough,N.J., Fredrickson,J.K., Zachara,J.M., Butt,J.N.
            and Richardson,D.J.
  TITLE     Structure of a bacterial cell surface decaheme electron conduit
  JOURNAL   Proc Natl Acad Sci U S A 108 (23), 9384-9389 (2011)
   PUBMED   21606337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037016.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17963.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>145
                     /product="Ig-like domain-containing protein"
     Region          4..95
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          88..145
                     /region_name="Cadherin_4"
                     /note="Bacterial cadherin-like domain; pfam17803"
                     /db_xref="CDD:465514"
ORIGIN      
        1 mnrvndaptv enaiadqela edfasytidl ndafkdsdsa lnfsvsgnsn vlvsiengia
       61 tisptadwng setltftatd psgesisqtv nftvapvadi vadkatvved tptiikvlgn
      121 dtfeddgkvv sldtnngpan gtvsv
//
LOCUS       WP_257980125             721 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257980125
VERSION     WP_257980125.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 721)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..721
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=78066
     Region          <27..76
                     /region_name="Cornifin"
                     /note="Cornifin (SPRR) family; pfam02389"
                     /db_xref="CDD:280537"
     Region          <57..353
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          342..416
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); pfam02368"
                     /db_xref="CDD:396788"
     Region          430..508
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); cl02708"
                     /db_xref="CDD:445894"
     Region          <611..>675
                     /region_name="DUF1566"
                     /note="Protein of unknown function (DUF1566); pfam07603"
                     /db_xref="CDD:429556"
ORIGIN      
        1 mlllvtslfg cnsdsgssts qppmslpeev lpdepeieap ipelpvpefp diskpevpet
       61 pevtppepsd pvipeppvpd kvvsrialnq srvslaegel aqvkvigfyn ddtqddltsq
      121 vvwnvenadi vnidergvit avksgvsair adldefssem tvqvvdaklt niyfdlphka
      181 iakglsfqak aygeytdkqt rdishlvewd stdcsvvmpg ingiftaqde gdadiyaeld
      241 gltsthgsit vtpavlvsmd isstalempl gthkslvvmg tlsdgeqvdl srgitwhvdn
      301 dvveivdnvv kakhkgtavl taaldgvqse piqvqvtdai ltnievttna ssvakgnstq
      361 lsaqgvysde srvelteqva wwvdnqdvlq legarvkgla vgqamvyatk daitsaplqi
      421 qvtnavleki hvhpseitle eknvqrfyay geysdettqd vthrvtwrss nkavldliag
      481 glsnsaqlgs vtisaslgel kgtsevkvve seekesaisi cpqprsgegs aeaclmvasd
      541 edgrlftapp svklmnklgy elvkplsyda tkpktyvgik tedgtrgpeg dfamfnqygr
      601 dragltsqya nwchdlsvrn fagrdnwrra trnelfslyr asrgsvwdgt esiyeedkdg
      661 ggfgwpanse ywstslmdlp hhegvvydii nlhrgraqlv mdardpayas cvsdapgvpl
      721 k
//
LOCUS       WP_257980128             435 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: HipA domain-containing protein [Vibrio].
ACCESSION   WP_257980128
VERSION     WP_257980128.1
KEYWORDS    RefSeq.
SOURCE      Vibrio
  ORGANISM  Vibrio
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae.
REFERENCE   1  (residues 1 to 435)
  AUTHORS   Black,D.S., Irwin,B. and Moyed,H.S.
  TITLE     Autoregulation of hip, an operon that affects lethality due to
            inhibition of peptidoglycan or DNA synthesis
  JOURNAL   J Bacteriol 176 (13), 4081-4091 (1994)
   PUBMED   8021189
REFERENCE   2  (residues 1 to 435)
  AUTHORS   Black,D.S., Kelly,A.J., Mardis,M.J. and Moyed,H.S.
  TITLE     Structure and organization of hip, an operon that affects lethality
            due to inhibition of peptidoglycan or DNA synthesis
  JOURNAL   J Bacteriol 173 (18), 5732-5739 (1991)
   PUBMED   1715862
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019421.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07804.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Vibrio"
                     /db_xref="taxon:662"
     Protein         1..435
                     /product="HipA domain-containing protein"
                     /calculated_mol_wt=48952
     Region          28..432
                     /region_name="HipA-like"
                     /note="serine/threonine-protein kinases similar to HipA
                     and CtkA; cl28916"
                     /db_xref="CDD:355792"
     Site            order(149..153,155,177,179,216,232..236,249,306,308,311,
                     328..329)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:341490"
ORIGIN      
        1 mhnpilyaha tnnnmlvgqf vqqsktygsf sysdewlayd safpislslp lvkgecssln
       61 alnfihnllp dlkeerlsla ysmgvqsnda ftllskighd ctggisftgs rqapnigwey
      121 reisaselne lvtqrksflp ffgeyrpcis gtqrkttlar lngkwyvpqe kslsshiiky
      181 pmdaiaqsns vldmsssven efictqiake lnfkvpdmei ittesgakal avkrfdrcfg
      241 dgvvtrrhqe dfcqifgvpe hqkyqsennl svskivdvls lsteskannh dffkfmvlqy
      301 flgatdghlk nfsvhiapsg hyqltpfydl lsaypaignr glnkrklkla mglkaskgyk
      361 yhiskiflrh ieqtasqfgi skvdcyeivs dflsqfnnal ssidkrfpek eftlvkdaiy
      421 qhateivgkl nrtik
//
LOCUS       WP_257980168             477 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: cation:dicarboxylate symporter family transporter
            [unclassified Streptomyces].
ACCESSION   WP_257980168
VERSION     WP_257980168.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012593.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00375.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..477
                     /product="cation:dicarboxylate symporter family
                     transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /calculated_mol_wt=48678
     Region          26..443
                     /region_name="SDF"
                     /note="Sodium:dicarboxylate symporter family; cl00573"
                     /db_xref="CDD:444986"
ORIGIN      
        1 maaqtpssrg taedappakr drthflylav igavllgiav gfaapgvave lkplgtgfvn
       61 likmmispvi fctivlgvgs vrkaakvgav gglalgyfml mstvalaigl lvgnlldpgs
      121 glhltdalrh agqaqtaggh esttdfllgi ipttlvsaft qgevlqtllv allvgfglqa
      181 lgkagepvlr gighiqklvf rvlsmimwaa pvgafgamaa vvgatgisal kslavimvgf
      241 yltcllfvvv vlgtllrlva gvnvlallky lgrefllils tsssesalpr liakmehlgv
      301 srpvvgitvp tgysfnldgt aiyltmaslf vaeamdkpls lgqqvsllvf miiaskgaag
      361 vtgaglatla gglqshrpel vdgvglivgi drfmsearam tnfagnavat vligtwtkei
      421 dkarvaevla grlpfdertl tadghgtlpd adaevgtdtg tgtdtvptgg gkasatv
//
LOCUS       WP_257980217             257 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Streptomyces sp.
            CB02959].
ACCESSION   WP_257980217
VERSION     WP_257980217.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. CB02959
  ORGANISM  Streptomyces sp. CB02959
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 257)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Streptomyces sp. CB02959"
                     /db_xref="taxon:2020330"
     Protein         1..257
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=26326
     Region          36..218
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(44..45,47..48,51,55,57..63,175..180,186..187,
                     189..190)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176102"
ORIGIN      
        1 matpgapaap trndvradla gyadgiagrq rmtgvatava gvlapaaarl raelprleve
       61 igedpgedry gllltgradi avvipapvgp padsrlraag evpppddarf avlpllqepq
      121 dllvpaghpf aaravdgvap aeaagatwvr agdpagqhql llaacasagf aprvrhhavd
      181 wytvaalvah gcgicllprl apvpehaplv rvplrgepvp vrrfvavvrr gsadrppiar
      241 avaalravag ereakgv
//
LOCUS       WP_257980226             195 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Streptomyces sp. CB02959].
ACCESSION   WP_257980226
VERSION     WP_257980226.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. CB02959
  ORGANISM  Streptomyces sp. CB02959
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Streptomyces sp. CB02959"
                     /db_xref="taxon:2020330"
     Protein         1..195
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=19485
     Region          <7..140
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mpfcndvrde lggsqsevvw mlaasgtgtl laalvlprvl driaacavmm tgagvlvggt
       61 taavtliatg ltawtgtavt wtvigigigm aliitptgra lrasvgrvai pevfaarlsl
      121 syparliayp iagwlgtnag ftlawsvlaa pagagaafal llrpchdgqg avtapvplpa
      181 gratgrdrpt ptkaa
//
LOCUS       WP_257980230             457 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: FAD-dependent oxidoreductase [unclassified
            Streptomyces].
ACCESSION   WP_257980230
VERSION     WP_257980230.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 457)
  AUTHORS   Mande,S.S., Sarfaty,S., Allen,M.D., Perham,R.N. and Hol,W.G.
  TITLE     Protein-protein interactions in the pyruvate dehydrogenase
            multienzyme complex: dihydrolipoamide dehydrogenase complexed with
            the binding domain of dihydrolipoamide acetyltransferase
  JOURNAL   Structure 4 (3), 277-286 (1996)
   PUBMED   8805537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07992.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..457
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=48472
     Region          2..450
                     /region_name="PLN02852"
                     /note="ferredoxin-NADP+ reductase; cl30539"
                     /db_xref="CDD:357415"
ORIGIN      
        1 mlrvavigsg psgvytaqtl vgqedvpdie vyvldrlpcp yglvrygvap dhekikslqn
       61 nlrtvlehpr vhflgnvavg aagvglrelr emfhavvfcv gaatdrhlni pgeelpgshp
      121 atdfvawysa hpdaaadgft ltarsavvig vgnvavdvar mlsrgaaela atdmpqgalg
      181 aladsrvedv wmvgrrgpsq akfttkelre lgalpgtqvl vrpeelaldp ayrdpgglpa
      241 pvrrnievlr dwaerpvera agmgrarrih lrfflrpvei lggpatgvra vrfertapdg
      301 rggvagtgef edvqgqlvlr svgyrglpqp glpfdettgt vphaagrvlr dgepdpgvyv
      361 agwikrgptg vigtnrpcak etatsllada aglarravaa dpvaalerag arpvpwrgwl
      421 aieaaeaerg relgrgtvkl adwagllraa rsvmvgr
//
LOCUS       WP_257980265             162 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Streptomyces sp. CB02959].
ACCESSION   WP_257980265
VERSION     WP_257980265.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. CB02959
  ORGANISM  Streptomyces sp. CB02959
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Streptomyces sp. CB02959"
                     /db_xref="taxon:2020330"
     Protein         1..162
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=15762
     Region          <1..132
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 myllalwlqr tyalsplaag laslpltfpv cvmpfftgrl varhgarpvl ltgmtatala
       61 gallllaggr pplplllvae lalaaagtls ipgaaaemav aaptelagta qgalngirqa
      121 gsalgvavlg tmgglpdagg vlvvaglaav vlisragapa rr
//
LOCUS       WP_257980243              59 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein, partial [Streptomyces
            sp. CB02959].
ACCESSION   WP_257980243
VERSION     WP_257980243.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. CB02959
  ORGANISM  Streptomyces sp. CB02959
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024776.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13384.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..59
                     /organism="Streptomyces sp. CB02959"
                     /db_xref="taxon:2020330"
     Protein         1..>59
                     /product="helix-turn-helix domain-containing protein"
     Region          12..>59
                     /region_name="transpos_IS630"
                     /note="IS630 family transposase; NF033545"
                     /db_xref="CDD:468076"
ORIGIN      
        1 mrratsaqal alrarivlac agpevppiva vardlrvtad tvrkwrrrfl vdrldglad
//
LOCUS       WP_257980334             537 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Streptomyces sp. CB02959].
ACCESSION   WP_257980334
VERSION     WP_257980334.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. CB02959
  ORGANISM  Streptomyces sp. CB02959
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 537)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Streptomyces sp. CB02959"
                     /db_xref="taxon:2020330"
     Protein         1..537
                     /product="AMP-binding protein"
                     /calculated_mol_wt=55962
     Region          20..532
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(192,304..305,326..331,414,426,429,440,523)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(192,231..232,277,279..280,283,304..305,326..331,414,
                     426,429,437..440,504)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(192..197,199..200)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(231,279..280,283,304,437..439,498,504)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
ORIGIN      
        1 matrpsttpv ppvspdsppf tsyvdlvlda lardpdrpav taadghevta galyatvhrm
       61 aavlrahgvg rdrtvsvlsr nrpealaary avnllgarvv llydgmaaet lsvvaesaet
      121 avllvdpelh dtaralldgl tgphprtmtf gpltagaapl gpdlladcaa lpatpvvtga
      181 arpeddwcir htggttgvpk gvrmahgpia amignarfea agdpprllac tslahlagiv
      241 adatlvaggs vvlhqdfdpt avlatvarer ithlwllppl lyrllddptl pttdlgsltr
      301 isyggctasa prmrqaaeal gpilyglygq seamsiteag padhadirtd gpmtvgrpap
      361 gvtvairdte grdlppgesg eihvhsagvm sgywkrpdlt aqvllqdgwv rtgdvgylda
      421 dgrlylvdrl kdviivvggh vhpaeledll hthpavahaa vygvrtpdet eevhvavvpa
      481 pghpadavsa talrafittr kgalyaptav hvldaipltp vgkpdkkllr artaats
//
LOCUS       WP_257980351             143 aa            linear   BCT 02-MAR-2025
DEFINITION  maleylpyruvate isomerase N-terminal domain-containing protein
            [Streptomyces sp. CB02959].
ACCESSION   WP_257980351
VERSION     WP_257980351.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. CB02959
  ORGANISM  Streptomyces sp. CB02959
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11716.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Streptomyces sp. CB02959"
                     /db_xref="taxon:2020330"
     Protein         1..143
                     /product="maleylpyruvate isomerase N-terminal
                     domain-containing protein"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=14567
     Region          32..>97
                     /region_name="MDMPI_N"
                     /note="Mycothiol maleylpyruvate isomerase N-terminal
                     domain; cl21506"
                     /db_xref="CDD:473890"
ORIGIN      
        1 mtdraesggd evsrsmpqpd dpnrpeppvr padpaglide ltrsgarlda tlsalgdaev
       61 rapsrlpgwt rgqvlahvar gaeaytwlla varngvepgp gagsealara vaeaaarpad
      121 alaaelrscs agsaagprtp rsw
//
LOCUS       WP_257980218             296 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6397 family protein [unclassified Streptomyces].
ACCESSION   WP_257980218
VERSION     WP_257980218.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 296)
  AUTHORS   Schwartz,D., Berger,S., Heinzelmann,E., Muschko,K., Welzel,K. and
            Wohlleben,W.
  TITLE     Biosynthetic gene cluster of the herbicide phosphinothricin
            tripeptide from Streptomyces viridochromogenes Tu494
  JOURNAL   Appl Environ Microbiol 70 (12), 7093-7102 (2004)
   PUBMED   15574905
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040401.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19934.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..296
                     /product="DUF6397 family protein"
                     /calculated_mol_wt=32559
     Region          18..268
                     /region_name="DUF6397"
                     /note="Family of unknown function (DUF6397); pfam19934"
                     /db_xref="CDD:466236"
ORIGIN      
        1 mtmtvmcdgr qtlsttqaaq elelrtgece latqlgevrt vpagtadrpg sagrparrrv
       61 paeeiarlqa epgfpeglra rlrtvttnea aalmgigpgr alrltragcv spvrfyvnrf
      121 gavvwlylas eitefadrep ellqgdtpaa mrvmltsgqd wrgrqwrsrr vaqlmgrtdd
      181 pwesaaviaa vlppeelasv addplerall rrlrptlasa itatsaares fertltseef
      241 devlwyrvnl sralesarre dpgrvrrpta artsrpaspq nslswtqrpr slsaha
//
LOCUS       WP_257980402             812 aa            linear   BCT 02-MAR-2025
DEFINITION  SdrD B-like domain-containing protein [Streptomyces sp. CB02959].
ACCESSION   WP_257980402
VERSION     WP_257980402.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. CB02959
  ORGANISM  Streptomyces sp. CB02959
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028519.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17210.9
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Streptomyces sp. CB02959"
                     /db_xref="taxon:2020330"
     Protein         1..812
                     /product="SdrD B-like domain-containing protein"
                     /calculated_mol_wt=83533
     Region          444..>708
                     /region_name="ClfA"
                     /note="Clumping factor A-related surface protein, MSCRAMM
                     (microbial surface components recognizing adhesive matrix
                     molecules) family, DEv-IgG fold [Cell
                     wall/membrane/envelope biogenesis]; COG4932"
                     /db_xref="CDD:443959"
     Region          596..732
                     /region_name="SdrD_B"
                     /note="SdrD B-like domain; pfam17210"
                     /db_xref="CDD:435789"
ORIGIN      
        1 mglsvvllag gavgatagpa vastadgtlt vsvlrdffgt gvinatmdvp qrgmkvevsd
       61 raghhvtgvt datgkvvvar stvlsggryr vdvsvpapys dylqaapast venhfdsfts
      121 fvdvsggkna svvtgvwdpa dytlpdsryf vpvqngangt dtralvafgt ktrgtcptgv
      181 scpdtlatqa qvgttfglay dkyrgrlfqs afarryapyg pkgggaiytv pvngsgapel
      241 faqmpgatat qhdtgnmikd pgftdapgke sigglalsed gstlyavnll trslvsfnaa
      301 gasasgpkat aripdpgcas agdwrpfgla vhnntlyvgg vcnaestqqr adlkavvyty
      361 dgkrfskvlt haltdkrgtv ftgagnvaqa thwnpwnttl atwderklgg afidpqpela
      421 slafardgsm ilgfrdrfmd vlsakgldpr pnnnapelgm sggdinmaca dpgggyaweg
      481 tgscpnhatp atnggqdsgv veyfpgdffg gghqetalgs vayipqqqwv vstefdptvn
      541 ietagtgyyd ittgqgpgns ptanayqfvg qeqngfgkag glgdiayaaa napiqignlv
      601 wfdgdhngiq dpaepllpga tinlldakgk qvattrtdaa geyyfggvga ayqltpgaky
      661 tvqfnvctad tskvpgrpaa selrftlpra ganrahdsnv tppttgklcn gyapvtaphr
      721 pggvdhtida gvyipkatpt ptptptptpt ptptsppssa ppanpgqagg dtgslahtgt
      781 sglptmiala gllvaaglgv aflsrkrrar kh
//
LOCUS       WP_257980448             174 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Streptomyces sp. CB02959].
ACCESSION   WP_257980448
VERSION     WP_257980448.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. CB02959
  ORGANISM  Streptomyces sp. CB02959
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 174)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 174)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Streptomyces sp. CB02959"
                     /db_xref="taxon:2020330"
     Protein         1..174
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=18729
     Region          <83..136
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(98,101,124,134)
                     /site_type="active"
                     /db_xref="CDD:271175"
ORIGIN      
        1 mgeascaasg lphgsparra dqaahlwdfs gtfssfrgsf eglsaaqdrk plkdrkgppp
       61 qvgspfqgdp ggtihpglfh nswdralkrl dlpdhnphdl rhkratvpqs ngvpihevsr
      121 wmghssikit vdryghlald gsercrqvie atfgvhmlng fpaprvpgae lvpa
//
LOCUS       WP_257980453             882 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Streptomyces sp. CB02959].
ACCESSION   WP_257980453
VERSION     WP_257980453.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. CB02959
  ORGANISM  Streptomyces sp. CB02959
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Streptomyces sp. CB02959"
                     /db_xref="taxon:2020330"
     Protein         1..882
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=90606
     Region          14..262
                     /region_name="STKc_PknB_like"
                     /note="Catalytic domain of bacterial Serine/Threonine
                     kinases, PknB and similar proteins; cd14014"
                     /db_xref="CDD:270916"
     Site            order(14,37..38,67,72,77..80,92)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:270916"
     Site            order(21..22,24..27,29,41,43,75,91..94,98,100,138,140,
                     142..143,145,154..155,158,179..182)
                     /site_type="active"
                     /db_xref="CDD:270916"
     Site            order(21..22,24..27,29,41,43,75,91..94,98,140,142..143,
                     145,154..155)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270916"
     Site            order(25,98,100,138,140,142,158,179..182)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270916"
     Site            order(154..162,175..182)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270916"
     Region          402..>703
                     /region_name="efflux_EmrB"
                     /note="drug resistance transporter, EmrB/QacA subfamily;
                     TIGR00711"
                     /db_xref="CDD:129794"
     Region          402..>543
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mdqlissdpt higpyrliar lgaggmglvy lgrseagrtv avkvvqaeha qhpefrrrfa
       61 revaaarkvg gswtaavlda dteaavpwva tqyipgpdlt tvvahdfgpl pensvrvlan
      121 rlalaleavh gaglihrdlk psnvlatvdg prvidfgiar amdslaedsl htrtgmligs
      181 pgfmspeqvr gleltpasdv fclgavlvya atgrllfgat etglnahlfr iaeeepdltg
      241 vpeslldlvr qcldkdpagr ptlqqvaart aadggtdaeg ewlpgavlaq lgrhaaklld
      301 fapettagtp gatpladpgi psgqpqppvp pppayaptap advvppqgfg pppgmgphaw
      361 atptspphpq dspfphpkrw wglaavalvq llvvldaasl riaipsvmad lhvrgddlsa
      421 iftgyelafv gllllgghla dlvgrkrmlv iglvgfavag aiggmaptpg vlvwaralqg
      481 afaallspaa lgvvaanfte pkargrafgv yvaiaaggst vgllsggwll nlswrlclfa
      541 nvplaviavi avaalvhdrp vrtaprldil glllgsggvl alvygfqeag trgwtdllvp
      601 allvvgavll vsfvrwqlst papllpsyvi rdrsrigsll tlflagagtl alfptltayl
      661 enyrgyspfg talavlpaaa aivigstqvs grllhrtapr nlivpgllla alglllltfl
      721 asdsgyatll lpgmllaglg lgmalmplyh latagvaapd agggaavtst agqvggalgt
      781 vlfsgvltaa laaqlqtvpg lspafvraar dgrilsgrgl ppqlaevvdk aalggytvvl
      841 wcsigvtlla vlaaallvrs tgpatpqptg ptfpaydqqg ty
//
LOCUS       WP_257980463             329 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: antibiotic biosynthesis monooxygenase [unclassified
            Streptomyces].
ACCESSION   WP_257980463
VERSION     WP_257980463.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 329)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015925.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03992.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..329
                     /product="antibiotic biosynthesis monooxygenase"
                     /calculated_mol_wt=36367
     Region          21..110
                     /region_name="HmoA"
                     /note="Heme-degrading monooxygenase HmoA and related ABM
                     domain proteins [Coenzyme transport and metabolism];
                     COG2329"
                     /db_xref="CDD:441901"
     Region          118..278
                     /region_name="COG3224"
                     /note="Antibiotic biosynthesis monooxygenase (ABM)
                     superfamily enzyme [General function prediction only]"
                     /db_xref="CDD:442457"
ORIGIN      
        1 mssrasrgsr sdvatvvisq kvragreddy rrwqdrtset vrgfagfegt elyppdspgg
       61 asagaggnew vvvfrfshld qlstwldsea rhelieqggd lfeepptqev lvggtpvhds
      121 vtavishvvr pdqepefvrw qdrvlaaqra fpgfmgself rpvkgvqgrw vavfrfdnrp
      181 hldawlespa reklldegra ffvsydvrkv gsafgswfrf dtsveegapp nwkqamsvll
      241 alyptvkvld ltvgsrlaal gvpgylglfl snvlsvailt wlllpllnrl lafwlmpgra
      301 qslrtqvtgt vlvmlcwavf lvvfavttg
//
LOCUS       WP_257980464             591 aa            linear   BCT 02-MAR-2025
DEFINITION  1-deoxy-D-xylulose-5-phosphate synthase N-terminal
            domain-containing protein [Streptomyces sp. CB02959].
ACCESSION   WP_257980464
VERSION     WP_257980464.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. CB02959
  ORGANISM  Streptomyces sp. CB02959
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 591)
  AUTHORS   Sprenger,G.A., Schorken,U., Wiegert,T., Grolle,S., de Graaf,A.A.,
            Taylor,S.V., Begley,T.P., Bringer-Meyer,S. and Sahm,H.
  TITLE     Identification of a thiamin-dependent synthase in Escherichia coli
            required for the formation of the 1-deoxy-D-xylulose 5-phosphate
            precursor to isoprenoids, thiamin, and pyridoxol
  JOURNAL   Proc Natl Acad Sci U S A 94 (24), 12857-12862 (1997)
   PUBMED   9371765
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024688.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13292.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Streptomyces sp. CB02959"
                     /db_xref="taxon:2020330"
     Protein         1..591
                     /product="1-deoxy-D-xylulose-5-phosphate synthase
                     N-terminal domain-containing protein"
                     /GO_function="GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA]"
                     /GO_process="GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=62565
     Region          68..277
                     /region_name="TPP_enzymes"
                     /note="Thiamine pyrophosphate (TPP) enzyme family,
                     TPP-binding module; found in many key metabolic enzymes
                     which use TPP (also known as thiamine diphosphate) as a
                     cofactor. These enzymes include, among others, the E1
                     components of the pyruvate, the acetoin and...; cl01629"
                     /db_xref="CDD:470272"
     Site            order(161,189..192,220,222)
                     /site_type="other"
                     /note="TPP-binding site [chemical binding]"
                     /db_xref="CDD:238970"
ORIGIN      
        1 mnalrdrfag paraalarlt paettvvqre laelergghg ggslleglrk laaqvperly
       61 tdsadvllrm heiagsgnhq snlsslplvr acfalglvdd edgrgpaeli vgrghiapaf
      121 yaehyvrgtl pftplatlhq ggltgvvhrd lgfrntmrys lgvgvaqavs laweltrrge
      181 drtvvclagd gelhegvafe alrfahdmgl tnlvlvvdan akgieplakp vntgylgayl
      241 grvveadgrd ehavaealga llagpgpaal vcrtrkgdhs fkpagaataa parptfaata
      301 grmlaaeqer tgrdlavftp dmaarfglrg qvpytntgla etltvgmtls lpadtlkvva
      361 tdamyymdsl smlteattsv rnllvlagrs wgawggahna tnllgqllht rvhepvtage
      421 faacldrlrr dpttahvvsm vdarfdppsr dcsadidgav wltppggagt eaavvtfgya
      481 svlveqanrd lgvphlhcaa laphlapddv avlrgcrrll sveyngargg fgeflraeyl
      541 lpvevhgvrr dianqvharq lplhgmtptv lrerlaallk sreagrapah a
//
LOCUS       WP_257980510             133 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: cupredoxin domain-containing protein [unclassified
            Streptomyces].
ACCESSION   WP_257980510
VERSION     WP_257980510.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024864.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13473.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..133
                     /product="cupredoxin domain-containing protein"
                     /calculated_mol_wt=13234
     Region          54..133
                     /region_name="Cupredoxin"
                     /note="Cupredoxin superfamily; cl19115"
                     /db_xref="CDD:473140"
ORIGIN      
        1 mspapmrpap trrslaavvl claaaltgcg hsggggtpsa sppatstgta apritikgfa
       61 frpaaltvrp gakitvvned dvahtvtstg vktfdtgava pgrsatftap akagdypyic
      121 tfhpnmkgtl tvr
//
LOCUS       WP_257980552             466 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4334 domain-containing protein [Streptomyces sp. CB02959].
ACCESSION   WP_257980552
VERSION     WP_257980552.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. CB02959
  ORGANISM  Streptomyces sp. CB02959
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14232.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Streptomyces sp. CB02959"
                     /db_xref="taxon:2020330"
     Protein         1..466
                     /product="DUF4334 domain-containing protein"
                     /calculated_mol_wt=51112
     Region          44..240
                     /region_name="Terpene_syn_C_2"
                     /note="Terpene synthase family 2, C-terminal metal
                     binding; pfam19086"
                     /db_xref="CDD:465972"
     Region          331..389
                     /region_name="GXWXG"
                     /note="GXWXG protein; pfam14231"
                     /db_xref="CDD:433793"
     Region          398..453
                     /region_name="DUF4334"
                     /note="Domain of unknown function (DUF4334); pfam14232"
                     /db_xref="CDD:433794"
ORIGIN      
        1 mprleiwlkg lglpvstalv pvmclqtaff tpwlpsetcy qisrltvwlm aidnvldapd
       61 drnasdsvgp datdarvrtw hrvlagheng sdsvdpmtra laeiaadlhh hgrpellahw
      121 resmhqtlrg mdreraaarr taagggaprl tdylthgawt igveqqvtal walmdepglp
      181 rrlpvllgal rqaaitirll ndlrghhreq qegkvdalal glseqeaher aeaaldacrr
      241 alapltaagy gsavalervv lwharmyhrf dpvrpgravs gplpggpggt artrhtpfvr
      301 rpkeappmgi eqevldvias ggeydgtrla alfdrlepvd talllgtwqg ggfertsena
      361 allaqmrwyg krfadadhve pllcrdeqga vfsfeemgla tlrevvfrgk qstamvydql
      421 pivdhfrrlt ddvllcvmdk kgepadfffh ltrvpgpvpg ppgdgg
//
LOCUS       WP_257980631             124 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Enterobacter cloacae].
ACCESSION   WP_257980631
VERSION     WP_257980631.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter cloacae
  ORGANISM  Enterobacter cloacae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (residues 1 to 124)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Enterobacter cloacae"
                     /db_xref="taxon:550"
     Protein         <1..>124
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          <1..>124
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 gvpyiivfln kcdmvddeel lelvemevre llsqydfpgd dtpivrgsal kalegdaewe
       61 akiielagyl dsyipepera idkpfllpie dvfsisgrgt vvtgrvergi ikvgeeveiv
      121 gike
//
LOCUS       WP_257980640             271 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Streptomyces sp. CB02959].
ACCESSION   WP_257980640
VERSION     WP_257980640.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. CB02959
  ORGANISM  Streptomyces sp. CB02959
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 271)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Streptomyces sp. CB02959"
                     /db_xref="taxon:2020330"
     Protein         1..271
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=28217
     Region          <153..267
                     /region_name="AbgB"
                     /note="Metal-dependent
                     amidase/aminoacylase/carboxypeptidase [General function
                     prediction only]; COG1473"
                     /db_xref="CDD:441082"
ORIGIN      
        1 mldggdlrdg gqrlgdrlha agpavdldeg gdhplqeaaa rvagdpgqpg alqttpapgr
       61 gdrvdaedrr dglpgrpwgd lqrmdqsrve tdqdtgflhe crlavsflhs qgipfaplta
      121 vrsmssqpgr qpgtggpgrs rapwgkryam tpavaesgtq tggaaaefae lypvtvndha
      181 eaefaahtvr ealgeerfap lpqplhgsed fsrvlaeapg amltlgappa gadpehspnn
      241 hsplaefdda vladgaavya elaarrltht g
//
LOCUS       WP_257980653             486 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Streptomyces sp. CB02959].
ACCESSION   WP_257980653
VERSION     WP_257980653.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. CB02959
  ORGANISM  Streptomyces sp. CB02959
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Streptomyces sp. CB02959"
                     /db_xref="taxon:2020330"
     Protein         1..486
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=50258
     Region          28..417
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(35..36,39..40,43,75,125..126,128..130,133,153,
                     156..157,163,233,236..237,296..298,301,329,333,382..383,
                     387,391,407,410..411,414..415)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mtglaariqa prraadrggf drkliapmil gsilnpinss mlavalipig rafgappsqt
       61 awlvsalyla tavgqpvigr lvdsygprpl yltgtalvgl agllgvlapn lgvlvvsrvm
      121 lgfgtsaayp asmfllraes drtglrspsg ilaalsvcgq viavvgptlg gllisaggwh
      181 lifginvpls aaclvlgalh lprlstlket sgvrpaqrtd aagmalfaam ltsfmlflmn
      241 prattwylpl lglltgvafa vrelrtsepf idlrvlrgna pllatygrql layttayafl
      301 ygftqwlees rslsaaaagl vllpmsatav avtavtgrra avrgklvvgs lvqlvgcaal
      361 lwvdatsplw llaaigavig ipqglnglan qnalyaqadp armgssagll rtfmylgala
      421 asaadaaffr hgattgglhh lsrlllavaa aflvvsvadr slhrvgrard gegdpaetsr
      481 pqqagr
//
LOCUS       WP_257980686             185 aa            linear   BCT 02-MAR-2025
DEFINITION  SAF domain-containing protein [Streptomyces sp. CB02959].
ACCESSION   WP_257980686
VERSION     WP_257980686.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. CB02959
  ORGANISM  Streptomyces sp. CB02959
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 185)
  AUTHORS   Iyer,L.M. and Aravind,L.
  TITLE     The emergence of catalytic and structural diversity within the
            beta-clip fold
  JOURNAL   Proteins 55 (4), 977-991 (2004)
   PUBMED   15146494
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020250.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08666.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Streptomyces sp. CB02959"
                     /db_xref="taxon:2020330"
     Protein         1..185
                     /product="SAF domain-containing protein"
                     /calculated_mol_wt=18457
     Region          19..79
                     /region_name="SAF"
                     /note="This domain family includes a range of different
                     proteins. Such as antifreeze proteins and flagellar FlgA
                     proteins, and CpaB pilus proteins; smart00858"
                     /db_xref="CDD:214862"
ORIGIN      
        1 mvvsavgftm vakvvghrdr vlvlardvpv grvlqpadlr vvevaadagv vpvadrgtvl
       61 grrvkvplva gallapgqvg tpvnfppkgs sqvslavepg gappelsrge rvavlpgptg
      121 ggaaqsdedq aaapvmgtvt gvrapespgg prvvtvlvet gaakraaqle hprvvvlpae
      181 greap
//
LOCUS       WP_257980741              60 aa            linear   BCT 02-MAR-2025
DEFINITION  integrase core domain-containing protein, partial [Aeromonas
            salmonicida].
ACCESSION   WP_257980741
VERSION     WP_257980741.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025063.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13683.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..60
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..60
                     /product="integrase core domain-containing protein"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <1..60
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 yqnalaervn gilkgelllq spqdlaqare mvreavdiyn vkrphhalky rtpdavhrgf
//
LOCUS       WP_257980747             233 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 9 protein, partial [Aeromonas
            salmonicida].
ACCESSION   WP_257980747
VERSION     WP_257980747.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012961.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00759.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..>233
                     /product="glycoside hydrolase family 9 protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <137..190
                     /region_name="PLN02420"
                     /note="endoglucanase"
                     /db_xref="CDD:178040"
ORIGIN      
        1 agklcarqri hpelghywsa nedgsrpyyh aaeaglpvla lleylgvepd qghkaqvqtv
       61 vqqalaaela lcaqagnpfs larqyvkgvd eaprvsffip hhnesgywwq genarlasla
      121 amafaaaeql pqqsgpllgf gqrqldwilg qnpfnacmla ghginnpgyt agypnalggi
      181 cngitagfdd endlafipeq ykdrldqnwr wgeqwiphaa wfalaiswqs aqg
//
LOCUS       WP_257980813             396 aa            linear   BCT 02-MAR-2025
DEFINITION  SAM-dependent methyltransferase [Streptomyces sp. CB02959].
ACCESSION   WP_257980813
VERSION     WP_257980813.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. CB02959
  ORGANISM  Streptomyces sp. CB02959
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 396)
  AUTHORS   Carilla-Latorre,S., Gallardo,M.E., Annesley,S.J., Calvo-Garrido,J.,
            Grana,O., Accari,S.L., Smith,P.K., Valencia,A., Garesse,R.,
            Fisher,P.R. and Escalante,R.
  TITLE     MidA is a putative methyltransferase that is required for
            mitochondrial complex I function
  JOURNAL   J Cell Sci 123 (Pt 10), 1674-1683 (2010)
   PUBMED   20406883
REFERENCE   2  (residues 1 to 396)
  AUTHORS   Sadreyev,R.I., Tang,M., Kim,B.H. and Grishin,N.V.
  TITLE     COMPASS server for remote homology inference
  JOURNAL   Nucleic Acids Res 35 (Web Server issue), W653-W658 (2007)
   PUBMED   17517780
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014673.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02636.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Streptomyces sp. CB02959"
                     /db_xref="taxon:2020330"
     Protein         1..396
                     /product="SAM-dependent methyltransferase"
                     /EC_number="2.1.1.-"
                     /calculated_mol_wt=41014
     Region          66..378
                     /region_name="Methyltransf_28"
                     /note="Putative S-adenosyl-L-methionine-dependent
                     methyltransferase; cl46525"
                     /db_xref="CDD:480865"
ORIGIN      
        1 mtregrgyva nehrhtrraa addhrpagpa apgtpdpghp trpeppadap hdtpgatwrg
       61 wreateraly gpdgfytrpg gpgpaghfrt svhasprfad avatllrrvd talghpgela
      121 lidvgagrge llsgvlaalp ddvaartrpy averaarpqg ldprvtwlae lpaadsltgl
      181 lfanewldnv pvdiaetdad gvprrvevra dgterlgapv dgpdaewlar wwpsaapeaa
      241 dpapglraei grprdaawar avrtlragla vavdyahdra drppfgtltg fragrevrpv
      301 pdgscdltah valdacagpg aetltqraal halgvagrrp plslattdpa gylralgaag
      361 aaaeltdpvg lggfgwllep vggtacagll tsggta
//
LOCUS       WP_257980765             166 aa            linear   BCT 02-MAR-2025
DEFINITION  pyruvate kinase, partial [Aeromonas salmonicida].
ACCESSION   WP_257980765
VERSION     WP_257980765.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 166)
  AUTHORS   Yuan,M., McNae,I.W., Chen,Y., Blackburn,E.A., Wear,M.A.,
            Michels,P.A.M., Fothergill-Gilmore,L.A., Hupp,T. and
            Walkinshaw,M.D.
  TITLE     An allostatic mechanism for M2 pyruvate kinase as an amino-acid
            sensor
  JOURNAL   Biochem J 475 (10), 1821-1837 (2018)
   PUBMED   29748232
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 166)
  AUTHORS   Munoz,M.E. and Ponce,E.
  TITLE     Pyruvate kinase: current status of regulatory and functional
            properties
  JOURNAL   Comp Biochem Physiol B Biochem Mol Biol 135 (2), 197-218 (2003)
   PUBMED   12798932
REFERENCE   3  (residues 1 to 166)
  AUTHORS   Valentini,G., Chiarelli,L.R., Fortin,R., Dolzan,M., Galizzi,A.,
            Abraham,D.J., Wang,C., Bianchi,P., Zanella,A. and Mattevi,A.
  TITLE     Structure and function of human erythrocyte pyruvate kinase.
            Molecular basis of nonspherocytic hemolytic anemia
  JOURNAL   J Biol Chem 277 (26), 23807-23814 (2002)
   PUBMED   11960989
REFERENCE   4  (residues 1 to 166)
  AUTHORS   Larsen,T.M., Benning,M.M., Wesenberg,G.E., Rayment,I. and Reed,G.H.
  TITLE     Ligand-induced domain movement in pyruvate kinase: structure of the
            enzyme from rabbit muscle with Mg2+, K+, and L-phospholactate at
            2.7 A resolution
  JOURNAL   Arch Biochem Biophys 345 (2), 199-206 (1997)
   PUBMED   9308890
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012449.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00224.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..>166
                     /product="pyruvate kinase"
                     /GO_function="GO:0000287 - magnesium ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0004743 - pyruvate kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0030955 - potassium ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006096 - glycolytic process [Evidence
                     IEA]"
     Region          <1..>166
                     /region_name="Pyruvate_Kinase"
                     /note="Pyruvate kinase (PK): Large allosteric enzyme that
                     regulates glycolysis through binding of the substrate,
                     phosphoenolpyruvate, and one or more allosteric effectors.
                     Like other allosteric enzymes, PK has a high substrate
                     affinity R state and a low...; cl39076"
                     /db_xref="CDD:453956"
ORIGIN      
        1 firkkedvle irehlrahgg eniqiiskie nqegldnfde ilavsdgimv argdmgveip
       61 veevifaqkm iitkcnkark vvitatqmld smiknprptr aeagdvanai ldgtdavmls
      121 gesakgkypl eavtimatic ertdavmpsn lsaandsnkl riteav
//
LOCUS       WP_257980881             420 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Pectobacterium versatile].
ACCESSION   WP_257980881
VERSION     WP_257980881.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium versatile
  ORGANISM  Pectobacterium versatile
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Pectobacterium versatile"
                     /db_xref="taxon:2488639"
     Protein         1..420
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44632
     Region          27..396
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(28..29,32,64,114..115,117..119,122,142,145..146,149,
                     226,229..230,233..235,238,266,270,320..321,325,329,344,
                     347..348,351..352,355)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mdesmyrpht rsvvhlalli nmlslgslmm vmplgpdfis alsmdaknig yisggatfas
       61 aivgflaapy ldrfnrkhal ivlltlrfgl taacmfatsq thllllfila gcvagpasgv
      121 lmaavvdivp anergkqlay vgmsfslaai vimplslela hrinwqapfy tfglgglllv
      181 llvlwlfpsm ppthraqqgs spttapasvl hellasplfl lgltimslqm fghflliphf
      241 snyfqfnlaf prddisllyl cgglasmvtm qlcgslldrg yasrtivvtt lllavvilcg
      301 fvlpfslsly lvftlfmals aarssstlai tagiplphqr aafmsyqgta anvasglasv
      361 asaaylstsa egkidgfsql aiastvfala amlltlrlip qlaersrkma asqtaqatgq
//
LOCUS       WP_257980885             159 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Streptomyces sp. CB02959].
ACCESSION   WP_257980885
VERSION     WP_257980885.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. CB02959
  ORGANISM  Streptomyces sp. CB02959
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024751.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13358.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Streptomyces sp. CB02959"
                     /db_xref="taxon:2020330"
     Protein         1..159
                     /product="transposase"
                     /calculated_mol_wt=17473
     Region          <22..158
                     /region_name="transpos_IS630"
                     /note="IS630 family transposase; NF033545"
                     /db_xref="CDD:468076"
ORIGIN      
        1 mashqvmdal egsglrgkrt riielytspp dgttvvcade lgpviprtfp sapgwspngh
       61 rskaeldysr gpkktwvyga lrvtdghavt mtapsrnsaf yqqflqkved anptgeivvv
      121 tdnlsshnsf strmwledhp rirhifipvg acwlnlqeg
//
LOCUS       WP_257980924             243 aa            linear   BCT 02-MAR-2025
DEFINITION  nitroreductase family protein [Streptomyces sp. CB02959].
ACCESSION   WP_257980924
VERSION     WP_257980924.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. CB02959
  ORGANISM  Streptomyces sp. CB02959
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 243)
  AUTHORS   de Oliveira,I.M., Henriques,J.A. and Bonatto,D.
  TITLE     In silico identification of a new group of specific bacterial and
            fungal nitroreductases-like proteins
  JOURNAL   Biochem Biophys Res Commun 355 (4), 919-925 (2007)
   PUBMED   17331467
REFERENCE   2  (residues 1 to 243)
  AUTHORS   Hecht,H.J., Erdmann,H., Park,H.J., Sprinzl,M. and Schmid,R.D.
  TITLE     Crystal structure of NADH oxidase from Thermus thermophilus
  JOURNAL   Nat Struct Biol 2 (12), 1109-1114 (1995)
   PUBMED   8846223
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013077.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00881.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Streptomyces sp. CB02959"
                     /db_xref="taxon:2020330"
     Protein         1..243
                     /product="nitroreductase family protein"
                     /calculated_mol_wt=25879
     Region          30..239
                     /region_name="PnbA_NfnB-like"
                     /note="nitroreductase similar to Mycobacterium smegmatis
                     NfnB; cd02136"
                     /db_xref="CDD:380313"
     Site            order(30..32,34,51,54..56,58..61,63..67,69..75,157..158,
                     160..166,169..170,173..174,176..177,181..182,190,193,195,
                     211,230..233,235,238..239)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:380313"
     Site            order(34..36,38,61..65,146,167,170,187..191,212,230,232)
                     /site_type="other"
                     /note="FMN binding site [chemical binding]"
                     /db_xref="CDD:380313"
     Region          <104..167
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
ORIGIN      
        1 msaptpasad psgrteftef telrgyaekl irgrravraf radtvaqetm raifslagta
       61 psnsnaqpwr vevvggavre rladalqaah aarrvsadfp yrqdmyspvq hdrqaefgar
      121 lygalgigrd dhaargayda eslrfygaph vaflfvdgga darlaadvga ylqtlllamt
      181 aygvdscpqg llsfyadtvr relgistgkl lvgvsfgyad aaapvnqvat eraaleattt
      241 fhg
//
LOCUS       WP_257980951             406 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: extracellular solute-binding protein [unclassified
            Streptomyces].
ACCESSION   WP_257980951
VERSION     WP_257980951.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..406
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=43604
     Region          37..399
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mtltltgcgs gsggngvalt liaadygdsk anssqhywda lvhafeeqnp gikvdvkvyn
       61 wtdvdkkved lvnagkapdm aqigayadya ahgklysadd llsipvqadf apslagagey
      121 qrrqygmpfg astrrlfynk klfteagitt ppqtwadias daralkahgv kipfalplgp
      181 eetqaetlew llagggdytd nigkytinsp eniktfewlq kdlvgkgltg tdpaklnred
      241 afadfangdv gmlnghptlm kqaeakgidy gtvelpgttg kakatmgvad wmmafkqngh
      301 rtevgkfldf vysqknvlkf sadynllpvt tsasqamlad dkfsklhgfl tqlpnahfyp
      361 sdktswplvs ktiksrmgat vgphgnpsat ltdiqniaet adntge
//
LOCUS       WP_257980556            2084 aa            linear   BCT 02-MAR-2025
DEFINITION  toxin glutamine deamidase domain-containing protein [Streptomyces
            sp. CB02959].
ACCESSION   WP_257980556
VERSION     WP_257980556.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. CB02959
  ORGANISM  Streptomyces sp. CB02959
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 2084)
  AUTHORS   Nishide,A., Kim,M., Takagi,K., Himeno,A., Sanada,T., Sasakawa,C.
            and Mizushima,T.
  TITLE     Structural basis for the recognition of Ubc13 by the Shigella
            flexneri effector OspI
  JOURNAL   J Mol Biol 425 (15), 2623-2631 (2013)
   PUBMED   23542009
REFERENCE   2  (residues 1 to 2084)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 2084)
  AUTHORS   Sanada,T., Kim,M., Mimuro,H., Suzuki,M., Ogawa,M., Oyama,A.,
            Ashida,H., Kobayashi,T., Koyama,T., Nagai,S., Shibata,Y., Gohda,J.,
            Inoue,J., Mizushima,T. and Sasakawa,C.
  TITLE     The Shigella flexneri effector OspI deamidates UBC13 to dampen the
            inflammatory response
  JOURNAL   Nature 483 (7391), 623-626 (2012)
   PUBMED   22407319
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026980.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15644.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2084
                     /organism="Streptomyces sp. CB02959"
                     /db_xref="taxon:2020330"
     Protein         1..2084
                     /product="toxin glutamine deamidase domain-containing
                     protein"
                     /calculated_mol_wt=215185
     Region          <388..1095
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1057..1250
                     /region_name="PTZ00441"
                     /note="sporozoite surface protein 2 (SSP2); Provisional"
                     /db_xref="CDD:240420"
     Region          1246..1357
                     /region_name="Gln_amidase"
                     /note="Papain fold toxin 1, glutamine deamidase;
                     pfam15644"
                     /db_xref="CDD:434830"
     Region          <1409..1688
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          1872..1977
                     /region_name="XOO_2897-deam"
                     /note="Xanthomonas XOO_2897-like deaminase; pfam14440"
                     /db_xref="CDD:405178"
ORIGIN      
        1 mlpdalewvl emlgfnwpta dedklresaq ewrnfasgve elqqrgvtaa gnvvsqnsgd
       61 siegfnttwe kftggsgsgy fsdartaaet iavaldiaag lvigmkvavi vqlailaaei
      121 iaaqaaapft fglseigvaa ataatraivr kiikeaakqv ldaaletake pavsalqami
      181 sdvitqsvnm sfgaqdgfda grtlnkgvee gsnalensgq tfteslrdga gakaghhvrn
      241 gldsaaghns ggdsghesgs gsggsestss sgdggsssgg gtssgggtss gggggaspgg
      301 htstgggstg gstggstggs ptggpsnggp aphdslsvga gdstggsgnt ggspnpvthe
      361 gssptggtgd hstnggtppr pmnsdtppps rltpfdegyr esqstpqnad apppgashtp
      421 ppgttqaqtp spdptpaptp pthdgpaqgi ggqgtdhgpg pgtdhgsgst pppapgnspt
      481 pdssgpttpa phdngpaptp fntgdpaqdh sptpqqhdgp aqehsptpqq qggpaqdhsp
      541 tpqqqggpaq dhnpgpqqqg gpaqdhnptp qqqggpaqdh sptpqqqggp aqdhnptpqq
      601 qggpaqdhnp tpqqqggpaq dhsptpqqqg gpaqdhsptp qhqggpaqdh npapeprdtt
      661 pqqhgggats pahegnppqq hapsatptsa ptpdsgptpd sshsaspdsg grpeahgpqs
      721 spgqdhassp ssapdhsstq ndsgsgsgrg amptgggvpt ggvphagssg hgssgssgss
      781 sgvphqpaph rpdeggpvtv etesatlapp ppsgltqtgp sggdapgtsg ptgtpsssgq
      841 happpgmmmg ggvpptgapt agghgsatpp rssgtsagsg gapsrhtpgs dprntpqagq
      901 ssrprpttpr pdpsprterp qdgqpsarps rpaqqppqah dgppasakpn pssasdhdap
      961 tadntpkpah dqtpdggqqs hnppktdant ptpddgpkdn gpksetnppk adetptpegd
     1021 apkpedktsk tddtpnaedn hpkaddgpdk naqpkddgpd knadpkadgs pkddghesdd
     1081 ksdgksdsdp kpedapkpeg dqtpdkndkn dkneesgpak deqpdhspep dhsenspesd
     1141 qsdhsdqkdh pdqsqesdhp dqsehgdqpd sdgtdkhddr psldeirsgi qeapgglepp
     1201 haadqqalen svprnddgtp qrfpdptgdw aklqndggtd vpgrsnncad csrsfletwy
     1261 gnpqvsaprt pdvnpdgtpd rwspenkane niidwagash syagtspdgh haiaqdllna
     1321 gpgssaivqv nwadggghaf navnhdgkvv wvdtqsgevs hqpintdgat dvfyipldad
     1381 rnplhqapdp shdsdsdssy sqsdngshdg asthdapgad hpksdqpkgd qpeasdpsak
     1441 rkaedqpshd grtadpvsds dphkrtkmev dddgrsgqqs vgngqnntps ppqtlsgslp
     1501 dhlnalnldd smnvdspahq ppsqhgpptg ehgtghdgqs gsgtpmdvds qphagqsdgn
     1561 ghgsttpdhd qtststtdsk ndgnktgpta ddkgtgkhdt gtdhkdaagp apkdnqndtk
     1621 dstkdtpkad dkqdgqqddk qkgketqgeg sndaksdsks nadhpysdpk drgdsdtaqq
     1681 ekdgkhtldr edghskeygk epdaeqqklr erqtldvhri pldrvhtdlt rwaddghlaq
     1741 vfrassghad sgpdagkgpq kftesdlekr lpgfkdlerg eklavvssla rmsggfheqh
     1801 gvgqnpvevk hpyrnpneaa padgtkdsga knaeeslgar ghrnsgnkvl enlkltdgap
     1861 dslkkntpdf sdrnyavlev kgpppdnqvh yvadssvpvg eknvsgrhse khlldwldra
     1921 nkegtkytan alyterepcg kgqghahcsd tlrkmmpdgs kvyysttyrt dpedvqakkd
     1981 idkekakvkk dvakmshadv qkeakerldr rtdhtqqwid rekskidgsn dadarkelkk
     2041 midaeykkrk desttpekqa mtremdrhie hlnstwkkiq pslm
//
LOCUS       WP_257981065             162 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: snapalysin family zinc-dependent metalloprotease
            [unclassified Streptomyces].
ACCESSION   WP_257981065
VERSION     WP_257981065.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014129.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02031.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..162
                     /product="snapalysin family zinc-dependent
                     metalloprotease"
                     /EC_number="3.4.24.-"
                     /GO_component="GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=16823
     Region          <2..137
                     /region_name="snapalysin"
                     /note="NF033628"
                     /db_xref="CDD:411245"
ORIGIN      
        1 mvtltydasg agqwagsikq avqnwndavh nvrlepasts asadfvyeat sgwpqttlgp
       61 ifpggngdvq lgqqavdegy dttriaahet ghilglpddy sgpcselmsg hgpgtsctna
      121 kpnaaeaaqv dknyaagtpa vrphhhqvvi diwsgrvltg sr
//
LOCUS       WP_257981071             438 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome P450 [Streptomyces sp. CB02959].
ACCESSION   WP_257981071
VERSION     WP_257981071.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. CB02959
  ORGANISM  Streptomyces sp. CB02959
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 438)
  AUTHORS   Werck-Reichhart,D. and Feyereisen,R.
  TITLE     Cytochromes P450: a success story
  JOURNAL   Genome Biol 1 (6), REVIEWS3003 (2000)
   PUBMED   11178272
REFERENCE   2  (residues 1 to 438)
  AUTHORS   Graham-Lorence,S., Amarneh,B., White,R.E., Peterson,J.A. and
            Simpson,E.R.
  TITLE     A three-dimensional model of aromatase cytochrome P450
  JOURNAL   Protein Sci 4 (6), 1065-1080 (1995)
   PUBMED   7549871
REFERENCE   3  (residues 1 to 438)
  AUTHORS   Degtyarenko,K.N. and Archakov,A.I.
  TITLE     Molecular evolution of P450 superfamily and P450-containing
            monooxygenase systems
  JOURNAL   FEBS Lett 332 (1-2), 1-8 (1993)
   PUBMED   8405421
REFERENCE   4  (residues 1 to 438)
  AUTHORS   Nelson,D.R., Kamataki,T., Waxman,D.J., Guengerich,F.P.,
            Estabrook,R.W., Feyereisen,R., Gonzalez,F.J., Coon,M.J.,
            Gunsalus,I.C., Gotoh,O. et al.
  TITLE     The P450 superfamily: update on new sequences, gene mapping,
            accession numbers, early trivial names of enzymes, and nomenclature
  JOURNAL   DNA Cell Biol 12 (1), 1-51 (1993)
   PUBMED   7678494
REFERENCE   5  (residues 1 to 438)
  AUTHORS   Guengerich,F.P.
  TITLE     Reactions and significance of cytochrome P-450 enzymes
  JOURNAL   J Biol Chem 266 (16), 10019-10022 (1991)
   PUBMED   2037557
REFERENCE   6  (residues 1 to 438)
  AUTHORS   Nebert,D.W. and Gonzalez,F.J.
  TITLE     P450 genes: structure, evolution, and regulation
  JOURNAL   Annu Rev Biochem 56, 945-993 (1987)
   PUBMED   3304150
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00067.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Streptomyces sp. CB02959"
                     /db_xref="taxon:2020330"
     Protein         1..438
                     /product="cytochrome P450"
                     /GO_function="GO:0004497 - monooxygenase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=48306
     Region          43..427
                     /region_name="CYP170A1-like"
                     /note="cytochrome P450 family 170, subfamily A,
                     polypeptide 1-like actinobacterial cytochrome P450s;
                     cd11049"
                     /db_xref="CDD:410673"
     Site            order(181,183..184,271,274..275,278..279,340..343,365)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410673"
     Site            order(272..273,276,279..280,283,342,344,402..404,408..412,
                     416)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410673"
ORIGIN      
        1 mnetipeggv rratgvrrra lqrippapha wpllghlvpl lrdtlaflks lpahgglvrl
       61 qmgsvpmvvi cdpeltrqal lddrvfdkgg pifdrfrdvl gdglascphh ehrrlrrlaq
      121 pafqpdrfpg ygrtmtacie emtgswtpgq tvevtaemms itsqvtaatl fsgslpatel
      181 glltgdvkti asgvfrrmfl ippldrlptr gnrayqsaha rlrrtcdrii aerradgtdh
      241 gdllsalvaa rdvedggrgm tdaeisdtil tfflagtett astvawaldl larhpeieqr
      301 lhtevdtvlr gnpatyadlp rlelagrivt etlrlypaaw fltrsvtedt rlgrhllpag
      361 tslvyspfli hhrpdlyadp etfdpdrwdp erpqpprsaf ipfaigarkc igdtfattea
      421 tlaradirpl epevparp
//
LOCUS       WP_257981077             563 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [unclassified Streptomyces].
ACCESSION   WP_257981077
VERSION     WP_257981077.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..563
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=57590
     Region          25..514
                     /region_name="PRK14995"
                     /note="SmvA family efflux MFS transporter"
                     /db_xref="CDD:184957"
ORIGIN      
        1 msgttasgrg rtggiprhtg ggvnrwtvlt vlcvsllfva ldttilyvav psitedlrpg
       61 pvellwivdi ypliaaslli lfgtlgdrvg rrrvlllgyg lfalasaaaa lapnpqilma
      121 arallgigga mimpatlsil rqvfpdrrer avaigvwsav aavgaavgpv lggflvenfw
      181 wgsvflinip mmaamfligr wllpesrger ngpwdlvgav iaalgvlgiv lgvkrlgsga
      241 pvvgvttllp ivvgavllil fvrrqgrrth plidmrlfar pafgtsicci vlamlalvgl
      301 qliavqylql vlglspletg lrmlplvfsa maagltgskl lqalgprvmv vggfaltala
      361 vlsltalgsq dhfwqlslgf vllgygfqst lfgayesmls eapaaqagga aalgetayql
      421 gagigvallg svmnaayapg lnrvagvsdr aahsashslg eaykvaaglg eharqtlrva
      481 ardafihglr vtliasavll lvgagialrl prraaesver adagaaaeeg aavvaedgag
      541 aaaedgaata gregapapag tgc
//
LOCUS       WP_257981106             100 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Streptomyces sp.
            CB02959].
ACCESSION   WP_257981106
VERSION     WP_257981106.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. CB02959
  ORGANISM  Streptomyces sp. CB02959
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Streptomyces sp. CB02959"
                     /db_xref="taxon:2020330"
     Protein         1..100
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=10356
ORIGIN      
        1 mreitrpgst atigavaaqv glsqprlrtl vrdwvgiplp rlrlwamlrt amtelpaesa
       61 aaaaafagfa dqahltrtar tlagrtpsei lrpgasgapa
//
LOCUS       WP_257981141             177 aa            linear   BCT 02-MAR-2025
DEFINITION  recombinase family protein [Streptomyces sp. CB02959].
ACCESSION   WP_257981141
VERSION     WP_257981141.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. CB02959
  ORGANISM  Streptomyces sp. CB02959
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 177)
  AUTHORS   Yang,W. and Steitz,T.A.
  TITLE     Crystal structure of the site-specific recombinase gamma delta
            resolvase complexed with a 34 bp cleavage site
  JOURNAL   Cell 82 (2), 193-207 (1995)
   PUBMED   7628011
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012464.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00239.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Streptomyces sp. CB02959"
                     /db_xref="taxon:2020330"
     Protein         1..177
                     /product="recombinase family protein"
                     /GO_function="GO:0000150 - DNA strand exchange activity
                     [Evidence IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /calculated_mol_wt=18901
     Region          <7..88
                     /region_name="Ser_Recombinase"
                     /note="Serine Recombinase family, catalytic domain; a DNA
                     binding domain may be present either N- or C-terminal to
                     the catalytic domain. These enzymes perform site-specific
                     recombination of DNA molecules by a concerted, four-strand
                     cleavage and rejoining...; cl02788"
                     /db_xref="CDD:445923"
ORIGIN      
        1 mvvgegvvaq arcrvlftvy emkrlgrdaa eltaladhlt ahglvlqmla gplpgiydps
       61 gpgrmlfgvf aamaeteres ireatlegld aaarkgkhga grpsspttcw ttvlrpraag
      121 esveqirldl iiptgkrkgq npglasiyra laehekrqay peavarptpt ftalqtn
//
LOCUS       WP_257981184             972 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6603 domain-containing protein [Streptomyces sp. CB02959].
ACCESSION   WP_257981184
VERSION     WP_257981184.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. CB02959
  ORGANISM  Streptomyces sp. CB02959
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042646.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20248.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..972
                     /organism="Streptomyces sp. CB02959"
                     /db_xref="taxon:2020330"
     Protein         1..972
                     /product="DUF6603 domain-containing protein"
                     /calculated_mol_wt=100850
     Region          254..770
                     /region_name="DUF6603"
                     /note="Family of unknown function (DUF6603); pfam20248"
                     /db_xref="CDD:466399"
ORIGIN      
        1 mavavselre rlrgdgagsg agrvvevpgd vlglgdgfrp lfadgvlrav wedgdaqalt
       61 ftgtartala dgpvpvevsf vhdggeavtg vslsvelpap gaagevlgrg lgidvpplpa
      121 sasvtrldlq radgvtvltg egehgqvtvv srsgigrlmv vasgawyvac adrgltadqv
      181 tdllgtakgv tvalpedgla egswlvlpgg awsggplvvp vrpdrprrel dparrdglgr
      241 ampvrgsavs avpvprvgvr rvphavvtdd gfvllapgwl asqrragfaf ggptdavsll
      301 gfidigvldg kskaikfdka plhisgglaa rkanppytla vggvllvdtg tfhgsaiaaa
      361 yapsagakps ffafgaltad kgigppafqv rgvaggmgwr shlrlpdgpe nvadfpfika
      421 lkdptsigak pdgtadplqv ldhltqgdsp witpaqgsdd pvwvaaglaf tvaecldgra
      481 mlavqtgedl tlallgvagm sfpkqpgrrk yahveiglea llkpkagels lsaaltsnsf
      541 vldpncrlrg gvafktwfgp spnkgdfvvt vggyhrnyrk pehypvvprl gfdwdlsgav
      601 tvsgdayfal tpaavmaggg ldvrfhsgav rawltakvda liqwkpfyfd vgmrvsvgvs
      661 asvkilfvri titievgvsl svwgpptgge akihlwfisf tigfgakrda dtnaldwpgf
      721 remlppsdta vrvlpgagli adrpqsadgt lsdddawqvs sagftfstds avpvgelylt
      781 rsggspverg sklnirpmdk tnrtsvqrvs vtwheqdkdl dlpawgrtpa tasvpqalwg
      841 tgrgdtlpgs geqvipnqlt gatlsspgpe ygndtgyige dalefdpier dgvqpldpna
      901 qpvgpvprrq sgvigtiart vaapaqnsar aqltqaltgl gldlgaldtd lsahrdaaet
      961 aftaepmlvp as
//
LOCUS       WP_257981174             284 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class IV [Streptomyces sp. CB02959].
ACCESSION   WP_257981174
VERSION     WP_257981174.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. CB02959
  ORGANISM  Streptomyces sp. CB02959
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 284)
  AUTHORS   Okada,K., Hirotsu,K., Sato,M., Hayashi,H. and Kagamiyama,H.
  TITLE     Three-dimensional structure of Escherichia coli branched-chain
            amino acid aminotransferase at 2.5 A resolution
  JOURNAL   J Biochem 121 (4), 637-641 (1997)
   PUBMED   9163511
REFERENCE   2  (residues 1 to 284)
  AUTHORS   Sugio,S., Petsko,G.A., Manning,J.M., Soda,K. and Ringe,D.
  TITLE     Crystal structure of a D-amino acid aminotransferase: how the
            protein controls stereoselectivity
  JOURNAL   Biochemistry 34 (30), 9661-9669 (1995)
   PUBMED   7626635
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013247.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01063.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Streptomyces sp. CB02959"
                     /db_xref="taxon:2020330"
     Protein         1..284
                     /product="aminotransferase class IV"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=30078
     Region          4..216
                     /region_name="PLPDE_IV"
                     /note="PyridoxaL 5'-Phosphate Dependent Enzymes class IV
                     (PLPDE_IV). This D-amino acid superfamily, one of five
                     classes of PLPDE, consists of branched-chain amino acid
                     aminotransferases (BCAT), D-amino acid transferases
                     (DAAT), and 4-amino-4-deoxychorismate...; cl00224"
                     /db_xref="CDD:444764"
     Site            order(25,44,130,164,190..191)
                     /site_type="active"
                     /note="substrate-cofactor binding pocket [active]"
                     /db_xref="CDD:238800"
     Site            order(44,130,164)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:238800"
     Site            130
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238800"
ORIGIN      
        1 mdylngepvg vdalkalalt nfghfttlrv ddgrvkglsl hldrlaadcr tvfdaaldra
       61 rvrallgqav dgrtgslavr vtvfdpglgl arpgadaeph llvtcrpvgg plaplrvttv
      121 vyqrempevk hvglfgqlai rraaqragad dalfvepgtd vlsegatwnv gfvdaqghvv
      181 wpaarvlpgv tmrllqtvht wqrrpvprae lpqlrgvgpa psstacsgqa yrvvpgplsl
      241 siqrtatgas lslwhlmhsa mftagigpvm psrvtllppp aera
//
LOCUS       WP_257981232             327 aa            linear   BCT 02-MAR-2025
DEFINITION  TniB family NTP-binding protein [Streptomyces sp. CB02959].
ACCESSION   WP_257981232
VERSION     WP_257981232.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. CB02959
  ORGANISM  Streptomyces sp. CB02959
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 327)
  AUTHORS   Kholodii,G.Y., Mindlin,S.Z., Bass,I.A., Yurieva,O.V.,
            Minakhina,S.V. and Nikiforov,V.G.
  TITLE     Four genes, two ends, and a res region are involved in
            transposition of Tn5053: a paradigm for a novel family of
            transposons carrying either a mer operon or an integron
  JOURNAL   Mol Microbiol 17 (6), 1189-1200 (1995)
   PUBMED   8594337
REFERENCE   2  (residues 1 to 327)
  AUTHORS   Radstrom,P., Skold,O., Swedberg,G., Flensburg,J., Roy,P.H. and
            Sundstrom,L.
  TITLE     Transposon Tn5090 of plasmid R751, which carries an integron, is
            related to Tn7, Mu, and the retroelements
  JOURNAL   J Bacteriol 176 (11), 3257-3268 (1994)
   PUBMED   8195081
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05621.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Streptomyces sp. CB02959"
                     /db_xref="taxon:2020330"
     Protein         1..327
                     /product="TniB family NTP-binding protein"
                     /calculated_mol_wt=35007
     Region          <72..310
                     /region_name="COG2842"
                     /note="Bacteriophage DNA transposition protein, AAA+
                     family ATPase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442090"
ORIGIN      
        1 mtvwdgfarf aatpvpappa pgaparslqe rvgyhsrfvt vrtpaidmla kqvrtlmilg
       61 rhqqvtarps livtgpagag kttallqvgr achlahtrrq deagvatggq vpvayvlvpp
      121 aasaktlale farflsvpvt armsqaavvn svchtytqag vrlvlideih rlnprtttga
      181 qsadlikdlt erigatfvya gidvtgttlf sgvrgaqlaa raslvdcdpf pahdgtcepf
      241 kdlvralena ldlryhrags lvrlapylhe rtagrigsla rlvkqaaitt lidgteritk
      301 atldgvrldh laeqhyrprt rtkpgsr
//
LOCUS       WP_257981261             210 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Vibrio parahaemolyticus].
ACCESSION   WP_257981261
VERSION     WP_257981261.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 210)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..210
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=23349
     Region          5..207
                     /region_name="PRK10403"
                     /note="nitrate/nitrite response regulator protein NarP"
                     /db_xref="CDD:182431"
ORIGIN      
        1 mtvckvmlvd dhplmrrgih qllsfepefe vvaeasngad avakahelel dlvlldlnmk
       61 gmsgldtlka lradgceari viltvsdspa dieaivrsga dgyllkdtep delvellrqa
      121 hqgdkaysqe vakylsersd hedvfdsltd retqilreva rgfrnkqiad rlfisestvk
      181 vhmksllkkl qvpsrtaatv lylerfgdik
//
LOCUS       WP_257981264            1563 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_257981264
VERSION     WP_257981264.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 1563)
  AUTHORS   Clarke,T.A., Edwards,M.J., Gates,A.J., Hall,A., White,G.F.,
            Bradley,J., Reardon,C.L., Shi,L., Beliaev,A.S., Marshall,M.J.,
            Wang,Z., Watmough,N.J., Fredrickson,J.K., Zachara,J.M., Butt,J.N.
            and Richardson,D.J.
  TITLE     Structure of a bacterial cell surface decaheme electron conduit
  JOURNAL   Proc Natl Acad Sci U S A 108 (23), 9384-9389 (2011)
   PUBMED   21606337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037016.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17963.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1563
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..1563
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=166471
     Region          4..95
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          87..170
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
     Region          615..722
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          1077..>1200
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cd00198"
                     /db_xref="CDD:238119"
     Site            order(1084,1162,1191)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     Region          <1415..>1485
                     /region_name="Peptidase_M10_C"
                     /note="Peptidase M10 serralysin C terminal; cl23859"
                     /db_xref="CDD:451582"
ORIGIN      
        1 mnrvndaptv enaiadqels edfatytidl ndafkdsdsa lnfsvsgnsn vlvsiengia
       61 tisptadwng setltftatd psgesisqtv nftvapvadi vadkatvved tptiikvlgn
      121 dtfegdgkvv sldanngpan gtvsvnpdgs vtytpndnyv gkdtftyvvt sggvsesttv
      181 tvnvtpvndk pesedfthva ddqlthvvfd tdtkplgsgd skdhiadved dlkgndlhvr
      241 itelptsgtl ffkdsdgelh eikevsdtly dkdslyyead nvgfllgikd rpntpngses
      301 tsdfnnwgls edggpshsrt ehlangasit issdsgelaq ynrqvshign giadndgqgi
      361 ekgetitidl snnpvgsvnl gldglgglfd ygddnaalit vtyldsnnvq qtqtfeflkp
      421 egnfmlfqet svgygkdlal pegsvitqld fstknegnwe lryvegvpae dsfgyvavds
      481 esgvsdpstv nivnemldgn vaengpavqs itgvtvvegd nvtfsvslnn atdqtvkyqv
      541 dfsaegssts sqdidlsnat ftngvkylgg ylivpagvng feitipsidd qlvesteslv
      601 ikvgdvsgvg yiddndvppt vqsneisgle deaivitleh lgvvdsgvsv efdtsalngs
      661 lqvkgpdgwe vvsgsvlasd iesglvryvp aehesgadvf dkdgvgngld tyeqihftvs
      721 dgnssasgtl sidlepvadp ikidltfgpv tsvpvtlggs wstdeelkdl leasnlpgld
      781 fehvvtqafn nghagndlml sgdtesplsf vgdqqaganv daqgsdifvt gggndsiygg
      841 igslddqaet dtvvysgkls dydfsyypas dhsevpywiv edsrfidtkd vvssthkesg
      901 dhlyeieqli fqdaiikldn ntgeyvvlte qqvsfelnld lidvdgsesf indsvtltgi
      961 psgltlevng ktvtensdgs ytvdlssepn qtshqlsgti tvpadyngsl dfdvtatags
     1021 vevnnntqmg adtasvsvrd yefvsgthgd nnivgsddnd vivgdvqglq ivegqdynia
     1081 fmldtsgsmg ydvgravtel ktvlntlies asgphsgkvn vllttfstes kqvleldlss
     1141 dnaksqvesi ldaivklgdg ntnyeagfqs alnwfenadn gatnlsyfis dgrpnqatdn
     1201 nvnwysskes vvlgvseqql vtladvlpsd yrfgdtvtyn nktvidfrgt vyslstgeem
     1261 grmlnsyeyd dfgnnvleqa nnaysalaef sevrsigigg hlnedslkhf dsdgvvrtni
     1321 dvnqlaevil gkevslmqgk deissldgnd iifgdairfd ingeqgvsal qnyvasqlgk
     1381 dvalvtkeev hhyitenqae feqsryydqa dtiyggagnd ilfgqggndk lfggadndil
     1441 igglgsdilt ggdgedifkw idvanerdtv tdfsssedsl dfsdlfddls kdevgdllsd
     1501 lqsgshtgda ggyhvevsqd gstdtnlsit kgsstldihf nsasvdditq hliasldsqy
     1561 kdm
//
LOCUS       WP_257981298             111 aa            linear   BCT 02-MAR-2025
DEFINITION  NrfD/PsrC family molybdoenzyme membrane anchor subunit, partial
            [Aeromonas salmonicida].
ACCESSION   WP_257981298
VERSION     WP_257981298.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 111)
  AUTHORS   Hussain,H., Grove,J., Griffiths,L., Busby,S. and Cole,J.
  TITLE     A seven-gene operon essential for formate-dependent nitrite
            reduction to ammonia by enteric bacteria
  JOURNAL   Mol Microbiol 12 (1), 153-163 (1994)
   PUBMED   8057835
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015851.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03916.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     gene            1..>111
                     /gene="nrfD"
     Protein         1..>111
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
     Region          4..>111
                     /region_name="NrfD"
                     /note="Polysulphide reductase, NrfD; cl21513"
                     /db_xref="CDD:451283"
ORIGIN      
        1 mwhdafhfps lvwdwpiaiy lfllgisaga tslsvllrrk gagsesgiik atailaplsv
       61 ilgllilifh larpwtfwkl mfhyqfdsvm smgvmlfqly mavlfawlav v
//
LOCUS       WP_257981320             354 aa            linear   BCT 02-MAR-2025
DEFINITION  reprolysin-like metallopeptidase, partial [Aeromonas salmonicida].
ACCESSION   WP_257981320
VERSION     WP_257981320.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024972.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13583.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..354
                     /product="reprolysin-like metallopeptidase"
                     /GO_function="GO:0008237 - metallopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
     Region          <1..72
                     /region_name="Reprolysin_2"
                     /note="Metallo-peptidase family M12B Reprolysin-like;
                     pfam13574"
                     /db_xref="CDD:372637"
     Region          <102..256
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
ORIGIN      
        1 tgsptpvgda ffidyvahei ghqfgadhtf ngttkscggg nrvaeqafep gsgtsimaya
       61 gicddeniqp hsdpyfhsks ieqmrahmat vptcgttlsl snnapqaaag anyaipanvp
      121 fvlrgagadl dkdpltytwe qidlgtesss tldmiddgtr plfrfvspts spervlpslp
      181 slltgtlakg eawpttnrel nfrltvrdgq ggvasndmkv qvvntgsafr ltsplgvtvt
      241 pgasqavswd vagtnaapin cskvdllvtq deganwstla ssqpnsgsat vtlptnltss
      301 vrlkvacsdn iffaisplkl pvaqssgssg gggggslgfw alalalfgwq rrra
//
LOCUS       WP_257981339             125 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Aeromonas
            salmonicida].
ACCESSION   WP_257981339
VERSION     WP_257981339.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         1..>125
                     /product="ABC transporter substrate-binding protein"
     Region          25..>121
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mkkglskiam alfaaglafn vsavdikvav asdatsldpq eqlsgqtlem shlvfdplmr
       61 ytqdlkfepr laekferidd ktvrfflrkg vkfhsgndft addvvwtvnr lkssvdfkai
      121 fdpia
//
LOCUS       WP_257981342             317 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Aeromonas salmonicida].
ACCESSION   WP_257981342
VERSION     WP_257981342.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 317)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..317
                     /product="AMP-binding protein"
     Region          <2..302
                     /region_name="MenE/FadK"
                     /note="O-succinylbenzoic acid-CoA ligase MenE or related
                     acyl-CoA synthetase (AMP-forming) [Lipid transport and
                     metabolism]; COG0318"
                     /db_xref="CDD:440087"
ORIGIN      
        1 tlfssgstge pkaipkawpq leaelrvqma lwgqaladtr vlasvshqhi ygllfrillp
       61 lalgrpfdrr sidypeqlav qtapwvlias paflsrldpa ipaagcrliv ssggplqpgd
      121 ahqarallgq lpveifgsse tggigwrqrn qaqtpwatlp gvevrvgpdq glllrspfla
      181 egdwlacadr ilmkgagfel lgrqdrvikl eekrisldev earlqalpev elaavlplqq
      241 gqrqilgavl vlsevgvarw aelgqgrfll alrqqlrpwl epvalprslr rvesmpvnaq
      301 gkrpwpqlke lfdeplc
//
LOCUS       WP_257981347            1004 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5801 repeats-in-toxin domain-containing protein, partial
            [Aeromonas salmonicida].
ACCESSION   WP_257981347
VERSION     WP_257981347.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 1004)
  AUTHORS   Cirillo,S.L.G., Lum,J. and Cirillo,J.D.
  TITLE     Identification of novel loci involved in entry by Legionella
            pneumophila
  JOURNAL   Microbiology (Reading) 146 (Pt 6), 1345-1359 (2000)
   PUBMED   10846213
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039867.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19116.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..>1004
                     /product="DUF5801 repeats-in-toxin domain-containing
                     protein"
     Region          <15..109
                     /region_name="T1SS_rpt_143"
                     /note="T1SS-143 repeat domain; TIGR03660"
                     /db_xref="CDD:132699"
     Region          267..390
                     /region_name="DUF5801"
                     /note="Domain of unknown function (DUF5801); pfam19116"
                     /db_xref="CDD:465976"
     Region          580..827
                     /region_name="COG2931"
                     /note="Ca2+-binding protein, RTX toxin-related [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:442175"
     Region          <723..>770
                     /region_name="Peptidase_M10_C"
                     /note="Peptidase M10 serralysin C terminal; cl23859"
                     /db_xref="CDD:451582"
ORIGIN      
        1 vqwswdagsk tlvgytgtlg sdgykavvev kltspnasgk gdwaydltlk apldhpvkgq
       61 edslsfqldv kvsdgkgttt gkldvtvedd apvagdaaav svtktnipdv ltgvfdltkv
      121 sgnkalvdla gftitakgft satnstlida svngsnaglg vssvagpyhn ianeidfrhf
      181 angtsaseql ivkldpgtva yganikfsqm fggelesgvv efyragvlig tqtfssnats
      241 gdyaenfqvq qggfdtmvik atnngksash gdnsdltvks iefigsstaq aiaygsgtvt
      301 pqwgadgkgy mqllgsnetg lttatgklit tsmesantli gkasdgslvf rleftpatgk
      361 weffqyqnms rplgdgdidf qikvvdadgd sslgsfatkp lvtpvvqsvs sgnaeeggnl
      421 shtvtlsdqt heatqydfai qgsganpass sdwgiaqfsn gvtynsatgk itvpagvsgf
      481 tvtlptvndr lvettetltv tvggqngtgt iidndrapvt tgghgvgmed tplvlkwsqf
      541 gasddqaasd lgvvigtlpq ngtleylnaa gqwiavkvgd lvsygdintg hlrfvpglne
      601 sstsaangng tsmgnqqgdy asfgyqisdg anlsnsgklv idiaavadkp vvdisltgng
      661 vplytqypss gistgafqsg nfnkgsfgit nsltdstnsq dsvvggngnd yivsvkgggd
      721 yfvgglgndv lvggnsvsgd tldggvgndi lvaglggdtl yggagtdlav lmgsranyvi
      781 errsdggfnf lvkengttis kslydielvq fddgiyqfnq tdgtltavqp svvdypleis
      841 asltdrdgse qldslelsgm psgatlyqgg tvlgtagadg kltlsglwnq gsldvkltgl
      901 tlrvpgsnag qfdlkveaia kevvtdqtss asdqdsirms yflstegepg dqnrtygseh
      961 nivvgdldgs vvlpgqnynl afmvdssgsi gttamntiks qlaq
//
LOCUS       WP_257981352             262 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Aeromonas salmonicida].
ACCESSION   WP_257981352
VERSION     WP_257981352.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         1..>262
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          57..>186
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 megikgqatl wvlvmtvtla vagfslpspv laplmldpaq gmltpeasdw srkvwlgvim
       61 glyplfqlvg spwlgrlsdr hgrkpiltvc lvgvlvgyal malgiawrsl pllllsrvve
      121 gffngdiaiv qamaadmstt ktkvrsfawi nigmnlgwvl gpmiggyaav vsgdyslaaw
      181 lavamtlvnl llvlwllpnk apvapsqqap slssrqlllq pallpyfvlt llsygavqly
      241 ftyfnvwlve rlawdpvqla qa
//
LOCUS       WP_257981370             160 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme, partial
            [Aeromonas salmonicida].
ACCESSION   WP_257981370
VERSION     WP_257981370.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         1..>160
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
     Region          <13..>158
                     /region_name="f2_encap_cargo1"
                     /note="family 2A encapsulin nanocompartment cargo protein
                     cysteine desulfurase; NF041166"
                     /db_xref="CDD:469077"
ORIGIN      
        1 mnqqeharlr gqfpalaqqv nghplvyldn aattqkpqav ldaiahyyra dnanvhraah
       61 alssratgaf eaaretvarf inaphsrevi wtrgtteain lvaqswglse lqagdeivls
      121 tlehhanivp wqliaqrtga lirviplder gdldiaayla
//
LOCUS       WP_257981364              73 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GTP-binding protein, partial [Aeromonas].
ACCESSION   WP_257981364
VERSION     WP_257981364.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas
  ORGANISM  Aeromonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae.
REFERENCE   1  (residues 1 to 73)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Aeromonas"
                     /db_xref="taxon:642"
     Protein         1..>73
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>73
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 mskekfernk phvnvgtigh vdhgkttlta aitnvlakhf ggkafafdqi dkapeererg
       61 itintshvey dta
//
LOCUS       WP_257981380             248 aa            linear   BCT 02-MAR-2025
DEFINITION  potassium-transporting ATPase subunit KdpA, partial [Aeromonas
            salmonicida].
ACCESSION   WP_257981380
VERSION     WP_257981380.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015753.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03814.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..248
                     /product="potassium-transporting ATPase subunit KdpA"
                     /EC_number="7.2.2.6"
                     /GO_function="GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0006813 - potassium ion transport
                     [Evidence IEA]"
     Region          <1..246
                     /region_name="KdpA"
                     /note="Potassium-transporting ATPase A subunit; cl00903"
                     /db_xref="CDD:469983"
ORIGIN      
        1 qagnwegkes rfgpvlssiw evattaasng avnsmhdsft plggmvgmin mllgevifgg
       61 vgsgiygmml fvlltvflcg lmvgrtptyl gkrlgitemk wvvasmlvmp vgvlvlggvt
      121 llmpdastii ghegphglsr liyayasaag nngsafagla aadswqciai glamllgrfg
      181 yiipvlaiag qlaraprqet gegdfpirgp lfitlliitv lligglsflp vlalgpvaeh
      241 lslmqgaf
//
LOCUS       WP_257981381             301 aa            linear   BCT 02-MAR-2025
DEFINITION  potassium-transporting ATPase subunit KdpA, partial [Aeromonas
            salmonicida].
ACCESSION   WP_257981381
VERSION     WP_257981381.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015753.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03814.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         1..>301
                     /product="potassium-transporting ATPase subunit KdpA"
                     /EC_number="7.2.2.6"
                     /GO_function="GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0006813 - potassium ion transport
                     [Evidence IEA]"
     Region          1..>301
                     /region_name="KdpA"
                     /note="Potassium-transporting ATPase A subunit; cl00903"
                     /db_xref="CDD:469983"
ORIGIN      
        1 mwqeviypva fvllvllpap llgsyiyrvf egksrwlspi eratlaccgt dgreqdwksy
       61 alsllafnga gfgllflilm aqgllplnpq qlpglnwela fntavsfmtn tnwqaysgea
      121 slsyfsqmvg lttqnfvsag tgaavavalf rgisrqqtih lgnfwqdlvr fclyvllpla
      181 limalllvwq gvpqslsayl pfhslegqeq llplgpaasq iaikqlgsng ggffgvnsah
      241 pfenptalsn wlemvtllti paalvctlgr yvkdtghgra iltamallfv lglclslsqe
      301 m
//
LOCUS       WP_257981395             178 aa            linear   BCT 02-MAR-2025
DEFINITION  secretin N-terminal domain-containing protein, partial [Aeromonas
            salmonicida].
ACCESSION   WP_257981395
VERSION     WP_257981395.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019280.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07655.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         1..>178
                     /product="secretin N-terminal domain-containing protein"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /GO_process="GO:0009297 - pilus assembly [Evidence IEA]"
     Region          98..>145
                     /region_name="hofQ"
                     /note="DNA uptake porin HofQ; PRK13568"
                     /db_xref="CDD:237430"
     Region          148..>178
                     /region_name="Secretin_N_2"
                     /note="Secretin N-terminal domain; pfam07655"
                     /db_xref="CDD:429577"
ORIGIN      
        1 mkknhlclis vavlaagcts yrhpepvqak dalkhamteq nkvgalatvp ksvqsellqm
       61 nrppqaismp eqrlriaahd veaveffgsl fkgsrysvav hpgvgglvsv elkdvtlpev
      121 lavvgdmygf dvqrkgnvfh vypaglrtet ipvnylmmsr rglsrtsvst ggvtandn
//
LOCUS       WP_257981437             178 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Aeromonas
            salmonicida].
ACCESSION   WP_257981437
VERSION     WP_257981437.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 178)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..178
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..177
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            21..54
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 lnshtqqisd iievirgiad qtnllalnaa ieaarageqg rgfavvadev rnlasrsaas
       61 tqqitgmisk iqsgadasir smentvnnvs rgvslanqtg eaitsiksha anltglmgei
      121 shtlreqsta anevvstvgh itslseqsgd aarhvsqeaa klkqlsrllr qemgrfkl
//
LOCUS       WP_257981423             266 aa            linear   BCT 02-MAR-2025
DEFINITION  mechanosensitive ion channel domain-containing protein, partial
            [Aeromonas salmonicida].
ACCESSION   WP_257981423
VERSION     WP_257981423.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 266)
  AUTHORS   Flegler,V.J., Rasmussen,A., Borbil,K., Boten,L., Chen,H.A.,
            Deinlein,H., Halang,J., Hellmanzik,K., Loffler,J., Schmidt,V.,
            Makbul,C., Kraft,C., Hedrich,R., Rasmussen,T. and Bottcher,B.
  TITLE     Mechanosensitive channel gating by delipidation
  JOURNAL   Proc Natl Acad Sci U S A 118 (33) (2021)
   PUBMED   34376558
REFERENCE   2  (residues 1 to 266)
  AUTHORS   Lai,J.Y., Poon,Y.S., Kaiser,J.T. and Rees,D.C.
  TITLE     Open and shut: crystal structures of the dodecylmaltoside
            solubilized mechanosensitive channel of small conductance from
            Escherichia coli and Helicobacter pylori at 4.4 A and 4.1 A
            resolutions
  JOURNAL   Protein Sci 22 (4), 502-509 (2013)
   PUBMED   23339071
REFERENCE   3  (residues 1 to 266)
  AUTHORS   Zhang,X., Wang,J., Feng,Y., Ge,J., Li,W., Sun,W., Iscla,I., Yu,J.,
            Blount,P., Li,Y. and Yang,M.
  TITLE     Structure and molecular mechanism of an anion-selective
            mechanosensitive channel of small conductance
  JOURNAL   Proc Natl Acad Sci U S A 109 (44), 18180-18185 (2012)
   PUBMED   23074248
REFERENCE   4  (residues 1 to 266)
  AUTHORS   Pliotas,C., Ward,R., Branigan,E., Rasmussen,A., Hagelueken,G.,
            Huang,H., Black,S.S., Booth,I.R., Schiemann,O. and Naismith,J.H.
  TITLE     Conformational state of the MscS mechanosensitive channel in
            solution revealed by pulsed electron-electron double resonance
            (PELDOR) spectroscopy
  JOURNAL   Proc Natl Acad Sci U S A 109 (40), E2675-E2682 (2012)
   PUBMED   23012406
REFERENCE   5  (residues 1 to 266)
  AUTHORS   Kloda,A. and Martinac,B.
  TITLE     Structural and functional differences between two homologous
            mechanosensitive channels of Methanococcus jannaschii
  JOURNAL   EMBO J 20 (8), 1888-1896 (2001)
   PUBMED   11296222
REFERENCE   6  (residues 1 to 266)
  AUTHORS   Kloda,A. and Martinac,B.
  TITLE     Molecular identification of a mechanosensitive channel in archaea
  JOURNAL   Biophys J 80 (1), 229-240 (2001)
   PUBMED   11159397
REFERENCE   7  (residues 1 to 266)
  AUTHORS   Martinac,B.
  TITLE     Mechanosensitive channels in prokaryotes
  JOURNAL   Cell Physiol Biochem 11 (2), 61-76 (2001)
   PUBMED   11275684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013117.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00924.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..266
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <1..259
                     /region_name="PRK11281"
                     /note="mechanosensitive channel MscK; cl46976"
                     /db_xref="CDD:481316"
ORIGIN      
        1 awslarnlpg llevlvlskl nlaqgtayai ttilnyvlig fgsltalsmm gvqwdklqwv
       61 agglsvgigf gmkeilsnfv sgiiilferp vrigdtvtig pfsgtvsrir irattltdfd
      121 rkeviipnqq lmterlinws lsdtvtrviv rvgvaygsdl eltrtllkqa adensrvlkd
      181 papivyfltf gpstldhelr ffvselgdrn pavdelnrki dalfkangie iafnqmdvyi
      241 knmkgeeqkv esdspqppal pgpqpg
//
LOCUS       WP_257981440             422 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Aeromonas
            salmonicida].
ACCESSION   WP_257981440
VERSION     WP_257981440.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 422)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..422
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          50..411
                     /region_name="TPP_PFOR_PNO"
                     /note="Thiamine pyrophosphate (TPP family), PFOR_PNO
                     subfamily, TPP-binding module; composed of proteins
                     similar to the single subunit pyruvate ferredoxin
                     oxidoreductase (PFOR) of Desulfovibrio Africanus, present
                     in bacteria and amitochondriate eukaryotes. This...;
                     cd03377"
                     /db_xref="CDD:239472"
     Site            order(63,86,115..116,208..211,237,239,241..243)
                     /site_type="other"
                     /note="TPP-binding site [chemical binding]"
                     /db_xref="CDD:239472"
     Site            order(76..78,92,97,105..107,109..114,117,120..121,
                     124..125,127..128,131..132,135,138,196,201,217,221..222,
                     228,243..244,249,256,258,261,265,269,273..274,277,
                     318..319,323..326,376,380,383,385,388,406)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239472"
ORIGIN      
        1 hegeraitmm dkaphlagqk qalrwfeslp wparervdfs tvrgaqflep lfefsgacag
       61 cgetpylkll tqlfgdrmlv anatgcssiy ggnlpttpwa knaegkgpaw snslfednae
      121 fgfgfrltad qhhgqavaal kamkgelgea lveslisapq rleseiraqr nrvahvrerl
      181 eevpsgkare llslidqlvr rsvwixggdg waydigsagl dhvlasgrdv nvlvmdtevy
      241 sntggqmsks tplgavakfa aggktlakkd valqaisygn vyvariafga npqqtlqalr
      301 eaeaypgpsl iiayshciah gidmelgltq qkravdsghw pllrynpvlr sagqnpfsld
      361 slrpsiplae yraeenryqv laqshpeeae rlmqvaqqva wqkwatyeem atreashfhp
      421 pv
//
LOCUS       WP_257981454             323 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase, partial [Aeromonas salmonicida].
ACCESSION   WP_257981454
VERSION     WP_257981454.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12697.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..323
                     /product="alpha/beta fold hydrolase"
     Region          50..317
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     Region          50..>181
                     /region_name="PldB"
                     /note="Lysophospholipase, alpha-beta hydrolase superfamily
                     [Lipid transport and metabolism]; COG2267"
                     /db_xref="CDD:441868"
ORIGIN      
        1 hmntgllcvl gllslglvtl vaallfggpg papemasisn pfktldwsgm psparykard
       61 gaelayrhya pagkdvrgsv vlvhgssass qsmhilasaf sqagygaytl dirghgesgq
      121 rgtiayigql eddledfsaa vtpsqpttla gfssgggfvl riaggsrqtl fdnylllspy
      181 lgptaanyrp nsggwvsvgl prlialsiln glhvsalnhl tvlnfalnde akalltpsys
      241 fnlasnfqpe rdyrqnlrnv krpcaviagt ddeafktdql apelralgiq wpvtlvpdig
      301 hialtldkra laaavqavek mtq
//
LOCUS       WP_257981452             133 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein, partial [Aeromonas
            salmonicida].
ACCESSION   WP_257981452
VERSION     WP_257981452.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024908.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13518.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         1..>133
                     /product="helix-turn-helix domain-containing protein"
     Region          10..>116
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 mttnekvarr klsllelake lnnvskackl igysrqqfye vrrnyqtyga eglldklpgc
       61 kgvhpnrvap eieqaildys ltrpthgplr vaqelalqgi nvsaggvrgv wqrhdllskh
      121 drflrlekth req
//
LOCUS       WP_257981469             247 aa            linear   BCT 02-MAR-2025
DEFINITION  acylphosphatase, partial [Aeromonas salmonicida].
ACCESSION   WP_257981469
VERSION     WP_257981469.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012911.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00708.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         1..>247
                     /product="acylphosphatase"
                     /EC_number="3.6.1.7"
     Region          13..>247
                     /region_name="HypF"
                     /note="Hydrogenase maturation factor HypF
                     (carbamoyltransferase) [Posttranslational modification,
                     protein turnover, chaperones]; COG0068"
                     /db_xref="CDD:439838"
ORIGIN      
        1 mtatlvpnfa gtrlrrefhi dgivqgvgfr pfvyglalrh sltgyvlnda ngvtigaegs
       61 peqlasfare lrelapplsr idhfserklp qgpdadydgt fhikasqqqs aatvaispdq
      121 gmcegcaadv tnpadrhhry pftncthcgp rytiirrlpy drphtamagf amcprcaaay
      181 enpldrryha qpvscpecgp hlswrsgrgd alaeredalh aaaralqtga liavkgmggy
      241 hlicdar
//
LOCUS       WP_257981484             348 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Aeromonas salmonicida].
ACCESSION   WP_257981484
VERSION     WP_257981484.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 348)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 348)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 348)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         1..348
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=38254
     Region          8..344
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(116..117,120,147)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238347"
ORIGIN      
        1 mlqaaapvev edvlgrkvsl tlpakrivlg fypedylava geggadrlvg msrgwfvksr
       61 paiwslyvas lpqlarvpdl gnvqdqsfsi ektlavkpdl vilaqwqyea lapdlprleq
      121 agipvvvvdy naqtlsrhma stlllgkvtg qeararkmad eymakietir sriaqakrqp
      181 prvyielgdk gpaeysytyg kdmwgamall aggdnvaapf verwgpihpe qllaskpevi
      241 lmagyesvss eqamqvgqdi saqtvharlq gfaarpgwrd lpavqqgrly avyhgatrsi
      301 mdaaliefma kafypdlfed ldplgtyqgf yhaylpirpq gtfmlgik
//
LOCUS       WP_257981522             209 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme, partial
            [Aeromonas salmonicida].
ACCESSION   WP_257981522
VERSION     WP_257981522.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..>209
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
     Region          <2..209
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            38
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99746"
ORIGIN      
        1 aakavgavtl idgaqavahl evdvqaigcd fyafsghkly gptgigvlwg rtellermpp
       61 wqaggemidr vsfsgttfna lpfkfeagtp hiagaiglaa aidfvmqqdr galaqheqrl
      121 idylvaglrq vpglrligep gqragavsfl lqdihsqdaa tlldmqgial rvghhcampl
      181 meslgisgtm raslacynnq ddvdallaa
//
LOCUS       WP_257981547             420 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Pectobacterium brasiliense].
ACCESSION   WP_257981547
VERSION     WP_257981547.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium brasiliense
  ORGANISM  Pectobacterium brasiliense
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Pectobacterium brasiliense"
                     /db_xref="taxon:180957"
     Protein         1..420
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44700
     Region          27..396
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(28..29,32,64,114..115,117..119,122,142,145..146,149,
                     226,229..230,233..235,238,266,270,320..321,325,329,344,
                     347..348,351..352,355)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mdesmyrpht rsvvhlalli nmlslgslmm vmplgpdfis alsmdaknig yisggatfas
       61 aivgflaapy ldrfnrkhal ivlltlrfgl taacmfatsq thllllfila gcvagpasgv
      121 lmaavvdivp anergkqlay vgmsfslaai vimplslela hrinwqapfy ifglggllla
      181 llvlwffpsm ppthrvqqgs sptttpasvl hdllasplfl lgltvislqm fghflliphf
      241 snyfqfnlaf prddisllyl cgglasmvtm qlcgnlldrg yasrtivvtt lllaavilcg
      301 fvlpfslsly lvftlfmals aarssstlai tagiplphqr aafmsyqgta anvasglasv
      361 asaaylstsa egkidgfsql aiasavfala amlltlrlip qlaersrkma arqtaqatgq
//
LOCUS       WP_257981553             156 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Pectobacterium brasiliense].
ACCESSION   WP_257981553
VERSION     WP_257981553.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium brasiliense
  ORGANISM  Pectobacterium brasiliense
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 156)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Pectobacterium brasiliense"
                     /db_xref="taxon:180957"
     Protein         1..>156
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          9..>156
                     /region_name="VI_Rhs_Vgr"
                     /note="type VI secretion system Vgr family protein;
                     TIGR03361"
                     /db_xref="CDD:274542"
ORIGIN      
        1 manstglqft vkvgaldagt favvdfrlde glnrpfslsl slasalpdvd fgavldqpce
       61 lmiwyegelk rrvsgiisgf tqgdtgfrrt ryqaevrpal wrlglrtnar ifqaqkpesi
      121 igalleeagi tdyafalrha hapreycvqy resdla
//
LOCUS       WP_257982008             495 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Pectobacterium aroidearum].
ACCESSION   WP_257982008
VERSION     WP_257982008.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium aroidearum
  ORGANISM  Pectobacterium aroidearum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 495)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Pectobacterium aroidearum"
                     /db_xref="taxon:1201031"
     Protein         1..495
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=53111
     Region          1..167
                     /region_name="chemoreceptor_sensor"
                     /note="4-helix bundle ligand binding sensor domain of
                     chemoreceptors such as Tar or Tsr; cl00144"
                     /db_xref="CDD:444710"
     Region          <157..495
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(282..283,286..287,290,293..294,296..297,300,
                     303..304,307,310..311,314..315,318,321..322,324..325,329,
                     331..332,335,338..339,342..343,346,349,352..353,356,360,
                     363,370,374,377,380..381,384,387..388,391..392,394..395,
                     398..399,412..413,416,419..420,423,426..427,429..430,
                     433..434,437,440..441,444,447..448,450..451,454..455,
                     457..458,461,464..465)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            352..385
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 mallllvvsl iglfgmnntn qsmktlyqdr lialgyldni trqvnnvmfe iasidlsqpn
       61 nvktglahie daqkiyneqw dlysktyltg eekileeqfa vlykqyndkv vvsainaihk
      121 ndkdaleyii nhtlkseyap lqktadqlik lqsdvgqtly sesqssfsnl lffvvitllv
      181 gvvivalsgw rliisiavpi knavdlarkv asgdlthria itsrdemgql qtalremvln
      241 ltdivervhs nadiiatasn qissgnidls srteqqassl eetaasmeqm tssvkqnath
      301 aahasqlatt asqravdggk mmgdvtnamq qmvssaekit niisvidgia fqtnilalna
      361 aveaarageq grgfavvage vrtlaqrsas aakeikelig tsveqanlgh tvvidaggti
      421 qsvvedikrv aslvteista sheqslgigq intaisqmet vtqqnaalvn eaaaaagsls
      481 eragelshav aafri
//
LOCUS       WP_257982103             951 aa            linear   BCT 02-MAR-2025
DEFINITION  putative Ig domain-containing protein, partial [Pectobacterium
            brasiliense].
ACCESSION   WP_257982103
VERSION     WP_257982103.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium brasiliense
  ORGANISM  Pectobacterium brasiliense
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 951)
  AUTHORS   Bentley,S.D., Maiwald,M., Murphy,L.D., Pallen,M.J., Yeats,C.A.,
            Dover,L.G., Norbertczak,H.T., Besra,G.S., Quail,M.A., Harris,D.E.,
            von Herbay,A., Goble,A., Rutter,S., Squares,R., Squares,S.,
            Barrell,B.G., Parkhill,J. and Relman,D.A.
  TITLE     Sequencing and analysis of the genome of the Whipple's disease
            bacterium Tropheryma whipplei
  JOURNAL   Lancet 361 (9358), 637-644 (2003)
   PUBMED   12606174
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017183.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05345.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Pectobacterium brasiliense"
                     /db_xref="taxon:180957"
     Protein         <1..951
                     /product="putative Ig domain-containing protein"
     Region          <1..51
                     /region_name="CADG"
                     /note="Dystroglycan-type cadherin-like domains;
                     smart00736"
                     /db_xref="CDD:214795"
     Region          <47..452
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
     Region          <279..652
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
     Region          655..747
                     /region_name="CADG"
                     /note="Dystroglycan-type cadherin-like domains;
                     smart00736"
                     /db_xref="CDD:214795"
ORIGIN      
        1 wlsfnpatgt fsgtpasgdi gnltikvtaa dgssasvstt fslavttvne apvvsgtiaa
       61 qsiaqggsln vtipagtftd pdgdtltlsa tladgttlpa wlsfnpatgt fsgtpvngdv
      121 gsltikvtat dgsnasvstt fgltvtnvnd apvvsgtipa qniaqggsln iiipagtftd
      181 pdgdtltlsa tladgtalpv wlsfnpatgt fsgtpgngdv gnltikvtat dgsnasvstt
      241 fgltvtnvnd apvvsgtipa qniaqggsln itipagtftd pdgdtltlsa tladgtalps
      301 wlsfnpatgt fsgtpangdv gnltikvtat dgsnasvstt fglsvtnvnd apvvstpipp
      361 qnvaqgggfn ftvpdgtfsd pdgdtltlsa tlangsplps wlrfdptigt fsgtpgnadv
      421 gtlvirvtat dgsntsists fgltvtdvnd apvvatpipp qnvaqgggfn ftvpdgtfsd
      481 pdgdtltlsa tlangsplps wlrfdptigt fsgtpgnadv gtlvirvtat dgsntsists
      541 fgltvtnvnd apvvatpipp qnvtqgggfn ftvpdgtfsd pdgdtltlsa tlangsplps
      601 wlrfdptigt fsgtpgnadv gtlvirvtat dgsntsists fgltvtnand apvvatpipp
      661 qnvtqgggfn ftvpdstfsd pdgdtltlsa tlangsplps wlrfdptigt fsgtpgnadv
      721 gtlvirvtat dgsntsists fgltvtssfv ssdpqfkand glgrtpsasd trqlftqdat
      781 ialpalddli anpslgsftv gndgapqsvm saifatgrqn teggtlptsq vagtfgrgaa
      841 sgiginfdst lgsfpsfskd palggtssla stfsgiylps ltpmevfsgg swkdipldga
      901 snamnstddg tgrsvaftps lhqqlqqigd skqqrlaaie qalqesgqqq g
//
LOCUS       WP_257982115             206 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Pectobacterium brasiliense].
ACCESSION   WP_257982115
VERSION     WP_257982115.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium brasiliense
  ORGANISM  Pectobacterium brasiliense
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 206)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Pectobacterium brasiliense"
                     /db_xref="taxon:180957"
     Protein         <1..>206
                     /product="AMP-binding protein"
     Region          <1..>206
                     /region_name="EntF"
                     /note="seryl-AMP synthase component of non-ribosomal
                     peptide synthetase [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG1020"
                     /db_xref="CDD:440643"
ORIGIN      
        1 gllgilkaga ayvpmdpayp aerlaymldd aapvalltqs aqvaplsstl ptvlldtpas
       61 sdypdtnpvv qglnathlay viytsgstgk pkgvmvahrn vlhlatglkt llalehpsri
      121 alnasivfda svknwiqlls ghtlvlvpda iradahqlwr yfarhavnlf dctpvqlqwl
      181 ldaglgtdpa yqpaqvligg eaispe
//
LOCUS       WP_257982122              79 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Pectobacterium brasiliense].
ACCESSION   WP_257982122
VERSION     WP_257982122.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium brasiliense
  ORGANISM  Pectobacterium brasiliense
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 79)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 79)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Pectobacterium brasiliense"
                     /db_xref="taxon:180957"
     Protein         <1..>79
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          1..>79
                     /region_name="VI_Rhs_Vgr"
                     /note="type VI secretion system Vgr family protein;
                     TIGR03361"
                     /db_xref="CDD:274542"
ORIGIN      
        1 dfgavldqpc elmiwyegel krrvsgiisg ftqgdtgfrr tryqievrpa mwrlglrtna
       61 rifqaqkpea iigalleea
//
LOCUS       WP_257982137              97 aa            linear   BCT 02-MAR-2025
DEFINITION  STAS-like domain-containing protein [Burkholderia pseudomallei].
ACCESSION   WP_257982137
VERSION     WP_257982137.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 97)
  AUTHORS   Sharma,A.K., Rigby,A.C. and Alper,S.L.
  TITLE     STAS domain structure and function
  JOURNAL   Cell Physiol Biochem 28 (3), 407-422 (2011)
   PUBMED   22116355
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10624723
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..97
                     /product="STAS-like domain-containing protein"
                     /calculated_mol_wt=10864
     Region          16..78
                     /region_name="DUF4325"
                     /note="STAS-like domain of unknown function (DUF4325);
                     pfam14213"
                     /db_xref="CDD:433776"
ORIGIN      
        1 miraldlvaq cysnadgqkv yeaivrllsk gepvvvsfdg vdavpssfvn safiallekf
       61 pfdrvkqlls frqttpqine mirsrfafea errarsh
//
LOCUS       WP_257982231             309 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_257982231
VERSION     WP_257982231.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 309)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>309
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          110..>309
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mtandllall nskgialsvk gdnlaitgde kvledpglla llrankpali dlikdghgtv
       61 ggavrvppnr ipadaeriap eqltlvrldq geidalvarv dggaanvqdi yplvpmqegm
      121 lfhhllsqqg daylesylla frtrerldrf lsalqqvidr hdilrtaffw eglphsvqvv
      181 qrratlplnv veldprdgdv gqqlearydp rshridvgra plmqvhaahd aaggrwlvrl
      241 lshhlavdht tlervieear aieqgrvedl prpvpfrnfv aqarlgvsea dheayfrakl
      301 gdideptap
//
LOCUS       WP_257982308              95 aa            linear   BCT 02-MAR-2025
DEFINITION  PTS sugar transporter subunit IIA, partial [Aeromonas salmonicida].
ACCESSION   WP_257982308
VERSION     WP_257982308.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00359.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..95
                     /product="PTS sugar transporter subunit IIA"
     Region          <1..88
                     /region_name="PTS_IIA_fru"
                     /note="PTS_IIA, PTS system, fructose/mannitol specific IIA
                     subunit. The bacterial phosphoenolpyruvate: sugar
                     phosphotransferase system (PTS) is a multi-protein system
                     involved in the regulation of a variety of metabolic and
                     transcriptional processes. This...; cl00163"
                     /db_xref="CDD:469635"
     Site            15
                     /site_type="phosphorylation"
                     /note="phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238129"
ORIGIN      
        1 rivstmlgeg ialphslgll arrtlvytvl apqgidwgng etatlifvla iskadyeeam
       61 glydlflalm nekasknlla crdfasfkgl artgs
//
LOCUS       WP_257982282             230 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Aeromonas
            salmonicida].
ACCESSION   WP_257982282
VERSION     WP_257982282.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 230)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..230
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <1..223
                     /region_name="TPP_enzymes"
                     /note="Thiamine pyrophosphate (TPP) enzyme family,
                     TPP-binding module; found in many key metabolic enzymes
                     which use TPP (also known as thiamine diphosphate) as a
                     cofactor. These enzymes include, among others, the E1
                     components of the pyruvate, the acetoin and...; cl01629"
                     /db_xref="CDD:470272"
     Site            order(19..22,48,50)
                     /site_type="other"
                     /note="TPP-binding site [chemical binding]"
                     /db_xref="CDD:238318"
ORIGIN      
        1 elardadylv dksvwliggd gwaydigfgg ldhvlslgen invlvldtqc ysntggqqsk
       61 atplgaitkf geqgkrkgrk dlgasimmyg hvyvaqislg aqmnqtvkai qeaeaypgps
      121 liiayspcee hgydlaqshe qmkqltatgf wplyrfdprr sdegklplal dsrapnasla
      181 etlsqeprfq rlerqlpeva tllyreaeld anrrfawlsq lagkeappqe
//
LOCUS       WP_257982312              84 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Aeromonas salmonicida].
ACCESSION   WP_257982312
VERSION     WP_257982312.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02371.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         1..84
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=9036
     Region          <3..83
                     /region_name="transpos_IS110"
                     /note="IS110 family transposase; NF033542"
                     /db_xref="CDD:468073"
ORIGIN      
        1 mpristvsgi gpivstvlia vigngpqfkk ardlpawlgl vpkqystdgk sslgwiskrg
       61 nsylrqmviq gakalkmhmk rdks
//
LOCUS       WP_257982386             334 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome ubiquinol oxidase subunit I, partial [Aeromonas
            salmonicida].
ACCESSION   WP_257982386
VERSION     WP_257982386.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 334)
  AUTHORS   Juty,N.S., Moshiri,F., Merrick,M., Anthony,C. and Hill,S.
  TITLE     The Klebsiella pneumoniae cytochrome bd' terminal oxidase complex
            and its role in microaerobic nitrogen fixation
  JOURNAL   Microbiology (Reading) 143 (Pt 8), 2673-2683 (1997)
   PUBMED   9274021
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013791.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01654.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         1..>334
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /EC_number="1.10.3.-"
                     /GO_component="GO:0070069 - cytochrome complex [Evidence
                     IEA]"
                     /GO_function="GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /GO_process="GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
     Region          6..>334
                     /region_name="Cyt_bd_oxida_I"
                     /note="Cytochrome bd terminal oxidase subunit I; cl00562"
                     /db_xref="CDD:469822"
ORIGIN      
        1 mislddvvsl sriqfgatam fhflfvpltl glswilviae sayvmtgkvi ykditrfwgk
       61 lfginfvmgv ttgitlefqf gtnwayyshy vgdifgtpla veglmaffle stlvglfffg
      121 wdklsrgqhl lvtalvalgs nlsalwilia ngwmqnpvga efnpmtmrme lmdvaavifn
      181 pvaqvkfvht vaagyvaasl fvmgvsswyl lrrmevrfal rsfaiasgfg laailsvivl
      241 gdesgyrsge vqkvklaaie aewetepapa sftlfglpdq gaetthaaik ipylmgiiat
      301 rsldeqvtgl kdlkaqhevr irsgmlahea leal
//
LOCUS       WP_257982394             234 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class III-fold pyridoxal phosphate-dependent
            enzyme, partial [Aeromonas salmonicida].
ACCESSION   WP_257982394
VERSION     WP_257982394.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 234)
  AUTHORS   Shen,B.W., Hennig,M., Hohenester,E., Jansonius,J.N. and Schirmer,T.
  TITLE     Crystal structure of human recombinant ornithine aminotransferase
  JOURNAL   J Mol Biol 277 (1), 81-102 (1998)
   PUBMED   9514741
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012428.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00202.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         1..>234
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
     Region          8..>234
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
ORIGIN      
        1 mtsryqhsla lsvraeqsip lgsqtfsksr lcfpygaapl fiergqgarv wdvdgndyld
       61 fasgllaisl gycdqdvnqa vleqlnlgsi fslphrlete vaeqlielip caemvrfgkn
      121 gtdatsacir lsravtgrer vavcgyhgwq dwyigsttrh lgvpecvrel thrfdyndlg
      181 slktqleahp gefaavilep mnvawptpef lpglrqlcde hgallifdet itgf
//
LOCUS       WP_257982416             259 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Aeromonas
            salmonicida].
ACCESSION   WP_257982416
VERSION     WP_257982416.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..259
                     /product="ABC transporter substrate-binding protein"
     Region          <3..235
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 kdakgypign dvtsdvavrr ainyaidrkl ladqllegha ipaysavegl pwlnkatafk
       61 dgdaahanal ldeagwkmgs dgirhkgdlr aavtlwytsg dstrrdlaea vramlkpigl
      121 evslksgswe qveremhanp vlmgwgsldp melyhhyqsg sggvefynpg yysnpvvdgh
      181 lkqaldapnw qaavpfwqqv ewdgktgagv qgdaawawll nvqhtylanr cidlgkgape
      241 ihgswsllnn lsdwrwtcr
//
LOCUS       WP_257982422             224 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Aeromonas salmonicida].
ACCESSION   WP_257982422
VERSION     WP_257982422.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..>224
                     /product="AMP-binding protein"
     Region          <2..>223
                     /region_name="EntF"
                     /note="seryl-AMP synthase component of non-ribosomal
                     peptide synthetase [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG1020"
                     /db_xref="CDD:440643"
ORIGIN      
        1 lptstpalpr daamlaqiiy tsgstglpkg vmveqgslvn lmadhgeria lgkggamfnc
       61 mslsfdagnm tnllplycga alhfgepgeg viaaaiacga shmilptall anllppadlg
      121 slkaigfgge acpsslverw gervalfnmy gptectvtal carltpgapi tigrpvnhlk
      181 alildeggnl cpvgvpgelc laglglargy lnlpertqea fiel
//
LOCUS       WP_257982435             363 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Aeromonas salmonicida].
ACCESSION   WP_257982435
VERSION     WP_257982435.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 363)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 363)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 363)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         1..363
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=39962
     Region          23..359
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(131..132,135,162)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238347"
ORIGIN      
        1 makllllgql tlmswmvqat apvevedvmg rkvslnlpas rivlgfyped ylavagegga
       61 drlvgmsrgw fvksrpaiws lyvaslpqla qvpdlgnvqd qsfsiektla vkpdlvilaq
      121 wqyealapdl prleqagipv vvvdynaqtl arhmastlll gkvtgqeara rkmadeykak
      181 ietirsriaq tkrqpprvyi elgdkgpaey sytygkdmwg amallaggdn vaapfverwg
      241 pihpeqllas kpevilmagy esvssaevmq vgqdvsaetv rarlqgfaar pgwrelpaiq
      301 qgrlyavyhg atrsimdaal iefmakafyp dlfedldpla tyqgfyhayl pirpqgtfml
      361 gik
//
LOCUS       WP_257982448              70 aa            linear   BCT 02-MAR-2025
DEFINITION  DegT/DnrJ/EryC1/StrS family aminotransferase, partial [Aeromonas
            salmonicida].
ACCESSION   WP_257982448
VERSION     WP_257982448.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 70)
  AUTHORS   Ahlert,J., Distler,J., Mansouri,K. and Piepersberg,W.
  TITLE     Identification of stsC, the gene encoding the
            L-glutamine:scyllo-inosose aminotransferase from
            streptomycin-producing Streptomycetes
  JOURNAL   Arch Microbiol 168 (2), 102-113 (1997)
   PUBMED   9238101
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013227.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01041.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..>70
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
     Region          <1..70
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
ORIGIN      
        1 sgyhlyvvqv adrdrvfaql reagigvnvh ympipaqpyy rdlghdpady pgaqayyrqa
       61 islplfpxls
//
LOCUS       WP_257982449              39 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein, partial [Aeromonas
            salmonicida].
ACCESSION   WP_257982449
VERSION     WP_257982449.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas salmonicida
  ORGANISM  Aeromonas salmonicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024908.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13518.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..39
                     /organism="Aeromonas salmonicida"
                     /db_xref="taxon:645"
     Protein         <1..>39
                     /product="helix-turn-helix domain-containing protein"
     Region          1..>39
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 elakelnnvs kackligysr qqfyeirrny qtygaegll
//
LOCUS       WP_257982525              78 aa            linear   BCT 02-MAR-2025
DEFINITION  DMT family protein [Pectobacterium brasiliense].
ACCESSION   WP_257982525
VERSION     WP_257982525.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium brasiliense
  ORGANISM  Pectobacterium brasiliense
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04342.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Pectobacterium brasiliense"
                     /db_xref="taxon:180957"
     Protein         1..78
                     /product="DMT family protein"
                     /calculated_mol_wt=8603
     Region          <5..67
                     /region_name="DMT_6"
                     /note="Putative member of DMT superfamily (DUF486);
                     cl01236"
                     /db_xref="CDD:470126"
ORIGIN      
        1 mvnrgialfa cffqvsanri syqvafagiv kilqgaigls lfipfsmfml kephrtdyic
       61 lpgavfflyc gqyaqitd
//
LOCUS       WP_257982556              71 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Pectobacterium brasiliense].
ACCESSION   WP_257982556
VERSION     WP_257982556.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium brasiliense
  ORGANISM  Pectobacterium brasiliense
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 71)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 71)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Pectobacterium brasiliense"
                     /db_xref="taxon:180957"
     Protein         <1..>71
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          <1..>71
                     /region_name="VI_Rhs_Vgr"
                     /note="type VI secretion system Vgr family protein;
                     TIGR03361"
                     /db_xref="CDD:274542"
ORIGIN      
        1 fnlatqglse geyvrrfhya ervstaevel kdysfktpay glshkkmsge lshqresyqh
       61 ydypgrykqd p
//
LOCUS       WP_257982591             306 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Burkholderia
            pseudomallei].
ACCESSION   WP_257982591
VERSION     WP_257982591.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 306)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..306
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=33535
     Region          83..275
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(99..100,102..103,106,110,112..118,204..209,215..216,
                     218..219)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176102"
ORIGIN      
        1 mnlvhprdad derrehgrre phpdqadgap sgvngsprpg atrptstpat segetylgya
       61 trivadirrm adavrasrsv prgllrvnvm lgfgrttitp lvsefatphp rvevrldvtd
      121 rpvdrvdggf dfairfgepp dtrlnarrim snrrllrasp vhlqrrgapa slarcivhrr
      181 nddahgvwrf vrdgeaegvk vraapssndg divpgwaldg hgilirsewd lakylesgrl
      241 rrvlpeyalp sadlsacypv rrnpsarpra pidflvarlg asapapartp eggrragsrd
      301 vpprvr
//
LOCUS       WP_257982639            1984 aa            linear   BCT 02-MAR-2025
DEFINITION  YadA-like family protein, partial [Burkholderia pseudomallei].
ACCESSION   WP_257982639
VERSION     WP_257982639.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 1984)
  AUTHORS   Sandt,C.H. and Hill,C.W.
  TITLE     Nonimmune binding of human immunoglobulin A (IgA) and IgG Fc by
            distinct sequence segments of the EibF cell surface protein of
            Escherichia coli
  JOURNAL   Infect Immun 69 (12), 7293-7303 (2001)
   PUBMED   11705900
REFERENCE   2  (residues 1 to 1984)
  AUTHORS   Hoiczyk,E., Roggenkamp,A., Reichenbecher,M., Lupas,A. and
            Heesemann,J.
  TITLE     Structure and sequence analysis of Yersinia YadA and Moraxella
            UspAs reveal a novel class of adhesins
  JOURNAL   EMBO J 19 (22), 5989-5999 (2000)
   PUBMED   11080146
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015831.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03895.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..1984
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..1984
                     /product="YadA-like family protein"
     Region          104..1812
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          1853..1894
                     /region_name="YadA_stalk"
                     /note="Coiled stalk of trimeric autotransporter adhesin;
                     pfam05662"
                     /db_xref="CDD:428572"
     Region          1925..1983
                     /region_name="YadA_anchor"
                     /note="YadA-like membrane anchor domain; pfam03895"
                     /db_xref="CDD:427576"
ORIGIN      
        1 tnssltslst sassgistaq sgvnslstgl stanstvasl stststglss atssiaslst
       61 ststgigsls tglsttnsnv aslssglsst nssltslsts assgistaqs gvnslstgls
      121 tanstvasls tststglssa tssiaslsts tstgigslst glstvatttn nlgsstaaal
      181 gggatynpat gtisapsytt ynangtttan tsvgsaidsi nangikyfha nstgpdsvat
      241 gadavaigtg ataatansva lgansvtaaa vptssatvgs ttlgtfagsa pvgvvsvgap
      301 gaerqitnva agqvtasstd aingsqlyav askldsasss isslstglss atssitslst
      361 ststglssan ssiaslstst stgigslstg lsttnsnvas lstststgls satssitsls
      421 tststgigsl stglsttnsn vaslststst glssatssia slstststgi gslstglstt
      481 nstvaslsts tstglssans siaslststs tgigslstgl sttnsnvasl ssglsstnss
      541 ltslstsass gistaqsgvn slstglsttn stvaslstst stglssatss iaslststst
      601 gigslstgls ttdstvasls tststglssa tssiaslsts tstgigslst glsttnsnva
      661 slssglsstn ssltslstsa ssgistaqsg vnslstglst anstvaslst ststglssan
      721 ssiaslstst stgigslstg lsttdstvas lstststgls sanssiasls tststgigsl
      781 stglsttdst vaslststst glssanssia slstststgi gslstglstt nsnvaslsts
      841 tstglssans siaslststs tgigslstgl sttnsnvasl stststglnl anssiaslst
      901 ststsidsls tglsttnsnv aslstststg lssanssias lstststgig slstglsttn
      961 snvaslstst stglnlanss iaslststst gigslstgls ttnsnvasls tststglssa
     1021 tssiaslsts tstgigslst glsttdstva slstststgl ssanssiasl stststgigs
     1081 lstglsttds tvaslststs tglssatssi tslstststg igslstglst tnsnvaslst
     1141 ststglssat ssiaslstst stgigslstg lsttnsnvas lstststgls satssiasls
     1201 tststgigsl stglsttdst vaslststst glssanssia slstststgi gslstglstt
     1261 nstvaslsts tstglssats siaslststs tgigslstgl sttdstvasl stststglss
     1321 atssiaslst ststgigsls tglsttnstv aslstststg lssatssias pstststgig
     1381 slstglsttn stvaslstst stgigslstg lsttnstvas lstststgig slstglsstn
     1441 snlvslstsa stgigslsts idttnsnlas lstssstgig slstsinatn snlaslstsa
     1501 stgigslsts issittnttn lgnstaaalg ggatydpatg aisapsytty nangttatnt
     1561 svgaaidnin angikyfhan stdpdsvatg tnsvaigpna vanvdysvai gsgattsaav
     1621 pvasasvggl tfggfagsap igvfsvgapg aerqitnvaa grisaastda vngsqlyatn
     1681 snvaslstgl natnsnlasl stststavgs lstglsttns tvaslststs tsigslstgl
     1741 atansnlasl stststgigs lstglattns nvaslstsvt nintqltsls tsitnnvirs
     1801 lpastgvaad msapkatsps vtagsnsval gagsndggrs nvvsvgsdtq qrqvtnvaag
     1861 tegtdavnvn qlntlstsms qslsnqqtql nnlgsqlnqt qqqlqqtdtm arqgiaavaa
     1921 masiphmdrd snfamgvgts sflgqkaiav gmqaritenl kaslnggfag nqkvigagml
     1981 yqwk
//
LOCUS       WP_257982638             537 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase, partial [Burkholderia pseudomallei].
ACCESSION   WP_257982638
VERSION     WP_257982638.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 537)
  AUTHORS   de la Cruz,J., Kressler,D. and Linder,P.
  TITLE     Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and
            related families
  JOURNAL   Trends Biochem Sci 24 (5), 192-198 (1999)
   PUBMED   10322435
REFERENCE   2  (residues 1 to 537)
  AUTHORS   Aubourg,S., Kreis,M. and Lecharny,A.
  TITLE     The DEAD box RNA helicase family in Arabidopsis thaliana
  JOURNAL   Nucleic Acids Res 27 (2), 628-636 (1999)
   PUBMED   9862990
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012492.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00270.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>537
                     /product="DEAD/DEAH box helicase"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
ORIGIN      
        1 msfaslglae plvravnelg ytqptpiqaq aipavlgggd llagaqtgtg ktagftlpil
       61 qrlhafyaen rsarravral iltptrelaa qveesvrays kyvklrstvm fggvsinpqi
      121 dalkrgvdiv vatpgrlldh mqqktidvss ldilvldead rmldmgfihd ikrvlaklpa
      181 krqnllfsat fsdeikslad slldspalie varrnttaet iaqkihpvdr drkrellthl
      241 irehnwfqvl vftrtkhgan rlaeqltkdg isamaihgnk sqsartrals efksstlqvl
      301 vatdiaargi didqlphvvn fdlpnvpedy vhrigrtgra gangeavslv cvdekqllrd
      361 ierlikreip qqvipgfepd pnakpepiqr rgqrgavagn ggsgngnsgg agnggrgnra
      421 praasqpqaq qgqaaarrdg gaqakaakpq qarggnsrpa gngnsnggga hanrsrssrs
      481 gqrgrspppm agpapnrppp phphpppppp apratrrapp ppppphpppp ppppppp
//
LOCUS       WP_257982641            1977 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase, partial [Burkholderia pseudomallei].
ACCESSION   WP_257982641
VERSION     WP_257982641.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..1977
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..>1977
                     /product="SDR family oxidoreductase"
     Region          <65..246
                     /region_name="NADB_Rossmann"
                     /note="Rossmann-fold NAD(P)(+)-binding proteins; cl21454"
                     /db_xref="CDD:473865"
     Site            order(126,150,163,167)
                     /site_type="active"
                     /db_xref="CDD:187535"
     Region          318..397
                     /region_name="PKS_PP"
                     /note="Phosphopantetheine attachment site; smart00823"
                     /db_xref="CDD:214834"
     Region          <580..812
                     /region_name="NAT_SF"
                     /note="N-Acyltransferase superfamily: Various enyzmes that
                     characteristicly catalyze the transfer of an acyl group to
                     a substrate; cl17182"
                     /db_xref="CDD:473072"
     Region          929..1241
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(946..947,950,1027,1060,1063,1100,1103)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:99741"
     Site            1103
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99741"
     Region          1286..>1823
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          <1839..>1931
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
ORIGIN      
        1 aasaacvars sdssctdhdg csrraprtsa dsaahvrrat ivlagraaap daalsaslga
       61 iarpagvdir yrsvdvgdap avaalvgdll rehgrlsgvi haagvtrdal lvrkpraefd
      121 avlrpkvaga aalyaatqdi dldflvsfss ivgvtgnlgq tdygaanafl dalaglraqm
      181 ggerrtrvls iawplwrdgg mgrepevvah ferafalapm dtaagidafh ralasdaayv
      241 vvangdadwt peraiarals ararpgapep aerthgpare aaaaaceava vsasasslsp
      301 spssasasvs aecapaddga arrhavvayl trqigavlgh apdsldidap ftsygmdsil
      361 aldttraier dlgslsktlf fehenvrqls dylldehadr lavcawfaqa geparaagpa
      421 laaggeptre taapsaaadt tadttadtta dttadttadt tadttadtta gttagiaiet
      481 stetptaatt qagpapegry rrvakaalpa dgqlaaavaa iggaaatkgv vlfeiwpelf
      541 vdsaghgych llvdggvlfa aqhagdarhr aalfaallay cdrhgyafgy ldlsegrkpd
      601 leaqcgllaa pvgvvqivea iasfslaggr mrrlrymver frkagacrvv eyrapdpdva
      661 reirrvicaw sdakkvvnnv divlgemasg slheryrvfl tylddvlqnv imiardgdgy
      721 lmdqeyyvad mplggteyav teilaalaae grerfslglt wglfdtgegs sdpaadafla
      781 stqtqlrrif ergaanrqyk skygtrdhav ylyrrpgkpe paivgclsqf yrkglthhev
      841 rrlagladap apapvaapaa vpqatpapap vatptadera ydvtridaat irvdlvsdsw
      901 ahvdypfmra raatldrhap parggdpgra vaellgfaqc llttsgraae hlffrarrsa
      961 rtrvpqnllf estlhnlvks gfepvelpda raldpdsrdl frggvdlaal drelqahada
     1021 tamvmlelcn nasggypval aqiraiaaac rrhgvplvmd vtrivknael irrgeagyaq
     1081 rglweivrei adhadavvgs lckdfglgag gllaardarv vanaagiarl egglpgpael
     1141 rriaaafddr aylereigrq ldfardlhie lercavpvvq pgaghcvlvr vdqlappggs
     1201 apsrgaylrl laerygvrgg lhlvgnlrds hlnacvrlal plgfddprgp galaaalaaa
     1261 rdgrdhaldd lmrapraraa hggrcadgia iiglsgrypd aptldafwrn lvsgrrsise
     1321 ipaerwdwrd hyerdpdtav ahgksygkwg gfldgfsafd plffqiapre aefidpqerl
     1381 fleacwhale dagcppsalt raqrakagvf ggmtkqgfnl ygaggaqpyq stslaalvnr
     1441 vshcfdfngp avafdshcas alvaiheacq ylrrepegia iagavnlnlh psnyqqlskm
     1501 qvlasgaesa sfasgglgyv pgegvgavvl kdyrraledg dpiygvirgs avnqngrmnr
     1561 fgmpsqkqqe avvraalaqa gvdprsityv easahgsavg daiemaaltr vfgareradg
     1621 cyrigsvkpn ighgeavsgm sqltkvllsl rhgqlpptlv cgapnpdidf dalpfelnts
     1681 ltdwararvd servprragi tstgasglna hlvleehaap avpaqagpge adarahvfvl
     1741 sardrarldd yardwiafln ddpqrdlaai aytlqvgrep macrlavvaa dcrdlagkla
     1801 rwreaahadc ddvfhgeara aagephheaa rdareprdva rawvggavvd waarhagarp
     1861 arvaglpgyp ferrsywpga aaapataraa aasdaseaar aleareahea tratrmtraa
     1921 researqape apsmsevtev tevtevtevt evtevtevte vtevtevtev tevteva
//
LOCUS       WP_257982679              91 aa            linear   BCT 02-MAR-2025
DEFINITION  BadF/BadG/BcrA/BcrD ATPase family protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_257982679
VERSION     WP_257982679.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 91)
  AUTHORS   Breese,K., Boll,M., Alt-Morbe,J., Schagger,H. and Fuchs,G.
  TITLE     Genes coding for the benzoyl-CoA pathway of anaerobic aromatic
            metabolism in the bacterium Thauera aromatica
  JOURNAL   Eur J Biochem 256 (1), 148-154 (1998)
   PUBMED   9746358
REFERENCE   2  (residues 1 to 91)
  AUTHORS   Egland,P.G., Pelletier,D.A., Dispensa,M., Gibson,J. and
            Harwood,C.S.
  TITLE     A cluster of bacterial genes for anaerobic benzene ring
            biodegradation
  JOURNAL   Proc Natl Acad Sci U S A 94 (12), 6484-6489 (1997)
   PUBMED   9177244
REFERENCE   3  (residues 1 to 91)
  AUTHORS   Bendrat,K., Muller,U., Klees,A.G. and Buckel,W.
  TITLE     Identification of the gene encoding the activator of
            (R)-2-hydroxyglutaryl-CoA dehydratase from Acidaminococcus
            fermentans by gene expression in Escherichia coli
  JOURNAL   FEBS Lett 329 (3), 329-331 (1993)
   PUBMED   8365476
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013986.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01869.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..91
                     /product="BadF/BadG/BcrA/BcrD ATPase family protein"
     Region          <1..91
                     /region_name="YjiL"
                     /note="Activator of 2-hydroxyglutaryl-CoA dehydratase
                     (HSP70-class ATPase domain) [Lipid transport and
                     metabolism]; COG1924"
                     /db_xref="CDD:441527"
ORIGIN      
        1 tvfaeseiis llakniskes iasgilqsia nrsksmlsri dilddiaftg gvaksnvlvn
       61 miennlgkki fiaddtqiig algaaiigyk k
//
LOCUS       WP_257982680             136 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphoglycerate kinase, partial [Burkholderia pseudomallei].
ACCESSION   WP_257982680
VERSION     WP_257982680.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012389.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00162.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     gene            1..>136
                     /gene="pgk"
     Protein         1..>136
                     /product="phosphoglycerate kinase"
                     /GO_function="GO:0004618 - phosphoglycerate kinase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006096 - glycolytic process [Evidence
                     IEA]"
     Region          1..>136
                     /region_name="Pgk"
                     /note="3-phosphoglycerate kinase [Carbohydrate transport
                     and metabolism]; COG0126"
                     /db_xref="CDD:439896"
ORIGIN      
        1 mptikylvdn gakvilcshl gkpkgeakpe lslapvakrl semlgkevvf aadenvvgen
       61 aktavekmen gdivllentr yrkeetknee nfskelasla eifvndafgt ahrahcstvg
      121 ageflnekvc gyliqk
//
LOCUS       WP_257982684              76 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_257982684
VERSION     WP_257982684.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 76)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..76
                     /product="PfkB family carbohydrate kinase"
     Region          <6..67
                     /region_name="FruK"
                     /note="1-phosphofructokinase or 6-phosphofructokinase II
                     [Carbohydrate transport and metabolism]; COG1105"
                     /db_xref="CDD:440722"
ORIGIN      
        1 ikannvpvvn vtgagdsfva glgygymrnv slkdtvkyav amsvltiahe dtihpemsdd
       61 vvlehiekln wtekiy
//
LOCUS       WP_257982689             146 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein,
            partial [Burkholderia pseudomallei].
ACCESSION   WP_257982689
VERSION     WP_257982689.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 146)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..>146
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
     Region          <10..146
                     /region_name="MrcB"
                     /note="Penicillin-binding protein 1B/1F, peptidoglycan
                     transglycosylase/transpeptidase [Cell
                     wall/membrane/envelope biogenesis]; COG0744"
                     /db_xref="CDD:440507"
ORIGIN      
        1 qlgstynesv dvmldylknf glsdlkdgpg gadrtfpalt lggmtkgasp ldmaaaygtl
       61 anggtyvepi tfttvessdg qvliqntpee hkvvdpevay vltdmlkavi tegiggaakf
      121 gdmpvagktg ttndnkdawf vgytpy
//
LOCUS       WP_257982702             244 aa            linear   BCT 02-MAR-2025
DEFINITION  TSUP family transporter [Shewanella sp. GutDb-MelDb].
ACCESSION   WP_257982702
VERSION     WP_257982702.1
KEYWORDS    RefSeq.
SOURCE      Shewanella sp. GutDb-MelDb
  ORGANISM  Shewanella sp. GutDb-MelDb
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Shewanellaceae; Shewanella.
REFERENCE   1  (residues 1 to 244)
  AUTHORS   Krejcik,Z., Denger,K., Weinitschke,S., Hollemeyer,K., Paces,V.,
            Cook,A.M. and Smits,T.H.
  TITLE     Sulfoacetate released during the assimilation of taurine-nitrogen
            by Neptuniibacter caesariensis: purification of sulfoacetaldehyde
            dehydrogenase
  JOURNAL   Arch Microbiol 190 (2), 159-168 (2008)
   PUBMED   18506422
REFERENCE   2  (residues 1 to 244)
  AUTHORS   Weinitschke,S., Denger,K., Cook,A.M. and Smits,T.H.M.
  TITLE     The DUF81 protein TauE in Cupriavidus necator H16, a sulfite
            exporter in the metabolism of C2 sulfonates
  JOURNAL   Microbiology (Reading) 153 (Pt 9), 3055-3060 (2007)
   PUBMED   17768248
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014035.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01925.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Shewanella sp. GutDb-MelDb"
                     /db_xref="taxon:2058316"
     Protein         1..244
                     /product="TSUP family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=25577
     Region          2..238
                     /region_name="DsbD"
                     /note="Cytochrome C biogenesis protein transmembrane
                     region; cl21514"
                     /db_xref="CDD:473893"
ORIGIN      
        1 mavvagfida iaggggllti palmwaglpp tvalatnklq acggsffasm yfvrkglinl
       61 admklsilca figaaigtia vqmidtafle vmlpflilsi ggyflfskki teeekhqvlt
      121 pavfaftaal gvgfydgffg pgtgsffala fvslagygla katahakiln fstniaslif
      181 faiggkvfwm lggvmlvgqa igatlgsrlv ltkgtkiikp lvvtmsiams lkllseqydl
      241 ffwi
//
LOCUS       WP_257982706             115 aa            linear   BCT 02-MAR-2025
DEFINITION  HisA/HisF-related TIM barrel protein, partial [Shewanella sp.
            GutDb-MelDb].
ACCESSION   WP_257982706
VERSION     WP_257982706.1
KEYWORDS    RefSeq.
SOURCE      Shewanella sp. GutDb-MelDb
  ORGANISM  Shewanella sp. GutDb-MelDb
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Shewanellaceae; Shewanella.
REFERENCE   1  (residues 1 to 115)
  AUTHORS   Copley,R.R. and Bork,P.
  TITLE     Homology among (betaalpha)(8) barrels: implications for the
            evolution of metabolic pathways
  JOURNAL   J Mol Biol 303 (4), 627-641 (2000)
   PUBMED   11054297
REFERENCE   2  (residues 1 to 115)
  AUTHORS   Fani,R., Tamburini,E., Mori,E., Lazcano,A., Lio,P., Barberio,C.,
            Casalone,E., Cavalieri,D., Perito,B. and Polsinelli,M.
  TITLE     Paralogous histidine biosynthetic genes: evolutionary analysis of
            the Saccharomyces cerevisiae HIS6 and HIS7 genes
  JOURNAL   Gene 197 (1-2), 9-17 (1997)
   PUBMED   9332345
REFERENCE   3  (residues 1 to 115)
  AUTHORS   Fani,R., Lio,P., Chiarelli,I. and Bazzicalupo,M.
  TITLE     The evolution of the histidine biosynthetic genes in prokaryotes: a
            common ancestor for the hisA and hisF genes
  JOURNAL   J Mol Evol 38 (5), 489-495 (1994)
   PUBMED   8028028
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013168.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00977.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Shewanella sp. GutDb-MelDb"
                     /db_xref="taxon:2058316"
     Protein         <1..115
                     /product="HisA/HisF-related TIM barrel protein"
                     /GO_process="GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
     Region          <7..108
                     /region_name="TIM-like beta/alpha barrel domains"
                     /note="A large family of domains similar to triose
                     phosphate isomerase (TIM) which, in general, share an
                     eight beta/alpha closed barrel structure; cl21457"
                     /db_xref="CDD:473867"
     Site            order(73..74,95..96)
                     /site_type="other"
                     /note="phosphate binding site [ion binding]"
                     /db_xref="CDD:240083"
ORIGIN      
        1 nineqgekiv avsgwqsggg ktleslvaef etvglkhalv tdisrdgtlk gannalyqei
       61 satypdinwq asggiatlad vtavknsgan giiigkalli nqftvkeaie cwpna
//
LOCUS       WP_257982720            1191 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Shewanella sp. GutDb-MelDb].
ACCESSION   WP_257982720
VERSION     WP_257982720.1
KEYWORDS    RefSeq.
SOURCE      Shewanella sp. GutDb-MelDb
  ORGANISM  Shewanella sp. GutDb-MelDb
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Shewanellaceae; Shewanella.
REFERENCE   1  (residues 1 to 1191)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Shewanella sp. GutDb-MelDb"
                     /db_xref="taxon:2058316"
     Protein         1..1191
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=133382
     Region          47..168
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cl21578"
                     /db_xref="CDD:473914"
     Region          167..687
                     /region_name="KinE"
                     /note="Sporulation sensor histidine kinase E [Cell cycle
                     control, cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG5809"
                     /db_xref="CDD:444511"
     Region          <437..1069
                     /region_name="PRK11107"
                     /note="hybrid sensory histidine kinase BarA; Provisional"
                     /db_xref="CDD:236848"
ORIGIN      
        1 maaivllcvl lsfggvkigr lvhdrlqvdn enlerqinlr tkelkdreea lwdlyensvv
       61 ayasvgpngn fikhnrqfsl lagiereefs rlnwrdiate enrliddvyq qalkgintqd
      121 trvqlydane kvmfvsistd lafdserkvt evrfslldis eqenvrleml enqqqyqvll
      181 eniqgvvyry kiniadgidy kleylspnve vvtgyqdsdf lgenprlsfa dmvvkedmil
      241 lrkalskayk thsfvtrdvr iitasdelrf lqikaqfvqd tvdnacyfdg tifditeqkl
      301 aenrlhlsed kltvaaesar mgmwdyypkd nkvvinrmya nmlgydvqdl cidddqwsal
      361 tngeqtwlql ihsddkalvv dhlraqtqsn pqilkrefrm rrkdgsydwi msigqvhhyt
      421 edgyagrisg vhlnineske lqrelasaie kaddanrakg dflanmshei rtpmnaiigm
      481 thlalktelt rqqynyidks hrsaqsllgi indildfski eagkldleti nfrledvldd
      541 iinligikaa ekelellfdi dptiptmlkg dplrlaqilt nltnnavkft ekgsvilavn
      601 tesladdeit lkfsvtdsgi gmtleqqqdl fkpfsqadas ttrkyggtgl glaicknlad
      661 lmggeigvss eldigsrfyf ecafpivehh dtapiyqgnl edvrvllved nassreilla
      721 mlstlkvqvd yakdgmeave mlkaseaspy qlalldwkmp kldgievarf ieqlpasitp
      781 hvvmvtaygk eellldaanv tidavltkpv tqstlwdall palgfaprkq trlsqrqtrv
      841 dtalaqlaga kllvaedndl nqelivellt sngissvlan dgqealdyla keefdgvlmd
      901 cqmpimdgyt atrhiraqaq fehlpvlamt anamagdrek aldagmndhi pkplnvdelf
      961 vtiakwvtpk npallhghvq neadnevdfg lfkhidtqlg lsrtqdksrl ykkllhkfvs
     1021 gqqdfsaqvn aslsandsvt tarlvhtlks vsgaigalkl tklaesleqd sehaqdkasd
     1081 itasetypll veelalvcse itvrlaesvv vdiatqfdag kaaevlnkli dmlndfdiaa
     1141 teliaeqrsi laskpllnlf kklekqlddy efdealkvai qmqtlvanem s
//
LOCUS       WP_257982758             169 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GNAT family N-acetyltransferase [unclassified
            Shewanella].
ACCESSION   WP_257982758
VERSION     WP_257982758.1
KEYWORDS    RefSeq.
SOURCE      unclassified Shewanella
  ORGANISM  unclassified Shewanella
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Shewanellaceae; Shewanella.
REFERENCE   1  (residues 1 to 169)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 169)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025054.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13673.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="unclassified Shewanella"
                     /db_xref="taxon:196818"
     Protein         1..169
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=18781
     Region          1..164
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
     Site            order(94..96,106..107)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
ORIGIN      
        1 msvrlfteqd vdqlatlfhl sitqgasshy saderavwsq aprshqdwlt rlqptttwva
       61 vergviagfi nlkpaqlkps dsaeevltad idclfshpdf tgrgvataly gyleeyaaaq
      121 hikeltveas ylakpffekq gykvlsknrh pragqvlvnf smskvlink
//
LOCUS       WP_257982771             414 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein, partial
            [Shewanella sp. GutDb-MelDb].
ACCESSION   WP_257982771
VERSION     WP_257982771.1
KEYWORDS    RefSeq.
SOURCE      Shewanella sp. GutDb-MelDb
  ORGANISM  Shewanella sp. GutDb-MelDb
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Shewanellaceae; Shewanella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Shewanella sp. GutDb-MelDb"
                     /db_xref="taxon:2058316"
     Protein         1..>414
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          25..>414
                     /region_name="type_I_sec_LssB"
                     /note="type I secretion system ATPase, LssB family;
                     TIGR03375"
                     /db_xref="CDD:274550"
ORIGIN      
        1 mtvsaskkte qwtisasqrv ivdplldslv llteyfgspc ssdslaaglp mqghvltpel
       61 lpqaasragl aaklsrkgln eitpillpci lllkdkkacl lreldvehdk aiiqlpetgg
      121 eetlsieele alyvgylflv kqeyrgdmgf dvhlhenksh wllqtlkdsa piyrdalias
      181 vlvnlfalvs plfimnvydk vvpnlafnsl wvlaigagia yifdlvmrql rsylidvagk
      241 kvdiivssql fakavgiple krspsvggma kqlgefdsir diltsatitt lvdlpfalff
      301 ltiiylvagd laliplvgsf iiiaytlimq pklkaaiees nkfsglkhgh lieslssles
      361 ikssgaeglv qkswqqmigh taswqlkskk istsvtnvat fvvqtsvifv vilg
//
LOCUS       WP_257982774             260 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphatase PAP2 family protein [Shewanella sp. GutDb-MelDb].
ACCESSION   WP_257982774
VERSION     WP_257982774.1
KEYWORDS    RefSeq.
SOURCE      Shewanella sp. GutDb-MelDb
  ORGANISM  Shewanella sp. GutDb-MelDb
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Shewanellaceae; Shewanella.
REFERENCE   1  (residues 1 to 260)
  AUTHORS   Neuwald,A.F.
  TITLE     An unexpected structural relationship between integral membrane
            phosphatases and soluble haloperoxidases
  JOURNAL   Protein Sci 6 (8), 1764-1767 (1997)
   PUBMED   9260289
REFERENCE   2  (residues 1 to 260)
  AUTHORS   Stukey,J. and Carman,G.M.
  TITLE     Identification of a novel phosphatase sequence motif
  JOURNAL   Protein Sci 6 (2), 469-472 (1997)
   PUBMED   9041652
REFERENCE   3  (residues 1 to 260)
  AUTHORS   Messerschmidt,A. and Wever,R.
  TITLE     X-ray structure of a vanadium-containing enzyme: chloroperoxidase
            from the fungus Curvularia inaequalis
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 392-396 (1996)
   PUBMED   8552646
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013718.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01569.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Shewanella sp. GutDb-MelDb"
                     /db_xref="taxon:2058316"
     Protein         1..260
                     /product="phosphatase PAP2 family protein"
                     /calculated_mol_wt=28661
     Region          12..244
                     /region_name="PAP2_like"
                     /note="PAP2_like proteins, a super-family of histidine
                     phosphatases and vanadium haloperoxidases, includes type 2
                     phosphatidic acid phosphatase or lipid phosphate
                     phosphatase (LPP), Glucose-6-phosphatase,
                     Phosphatidylglycerophosphatase B and bacterial acid...;
                     cl00474"
                     /db_xref="CDD:469784"
     Site            order(104,111,174..176,214,220,224)
                     /site_type="active"
                     /db_xref="CDD:238813"
ORIGIN      
        1 mnplhrdakt sskllligwa mlilipasly ifsvtmfpri eldthfaqll ywitstgtap
       61 ygiatgivil iacyrslakp qflqlvlavs ismaatlsln hflkpffaea rpyaallaqe
      121 sllntddfyq hnkknkrami staveqleva rndinlssai kghwqhevgy sfpsghtlfa
      181 vtlalvvsfy lllagqtllp talfswaiam gfsrmwlgmh wpqdvlastv iggiialssi
      241 aviqtllirv nrvqklsane
//
LOCUS       WP_257982861            1514 aa            linear   BCT 02-MAR-2025
DEFINITION  S-layer homology domain-containing protein [Lysinibacillus
            fusiformis].
ACCESSION   WP_257982861
VERSION     WP_257982861.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus fusiformis
  ORGANISM  Lysinibacillus fusiformis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 1514)
  AUTHORS   Mesnage,S., Fontaine,T., Mignot,T., Delepierre,M., Mock,M. and
            Fouet,A.
  TITLE     Bacterial SLH domain proteins are non-covalently anchored to the
            cell surface via a conserved mechanism involving wall
            polysaccharide pyruvylation
  JOURNAL   EMBO J 19 (17), 4473-4484 (2000)
   PUBMED   10970841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012613.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00395.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1514
                     /organism="Lysinibacillus fusiformis"
                     /db_xref="taxon:28031"
     Protein         1..1514
                     /product="S-layer homology domain-containing protein"
                     /calculated_mol_wt=164245
     Region          <161..998
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          312..>376
                     /region_name="Big_12"
                     /note="Bacterial Ig-like domain; pfam19078"
                     /db_xref="CDD:436946"
     Region          418..501
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          868..980
                     /region_name="Big_5"
                     /note="Bacterial Ig-like domain; pfam13205"
                     /db_xref="CDD:463809"
     Region          986..1061
                     /region_name="Flg_new"
                     /note="Listeria-Bacteroides repeat domain (List_Bact_rpt);
                     pfam09479"
                     /db_xref="CDD:462813"
     Region          <1322..1341
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          1364..1402
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          1433..1474
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
ORIGIN      
        1 mlvvysqltv ilfvaplkae aancgtsnyp tcvqdltqan wlsdttngfe vsgiagndgi
       61 hlftysndaq fpagyyfnad eystpksiri sagesfsggv fdlktlkint inshaendal
      121 sltiqgydev gnpkgnpvif ktiakhdpiy dipiniegin sfiitasvqf intvqaglwd
      181 ltfteftidi pnnnppnnpp tssngtvnvn egqvytfdst sftfndadag dtlkqiqist
      241 ipnsgqlfld nnnnqqfeag eaiangetis kadldvgkfk ymtengssas ftfkvsdgid
      301 ystvytmnlv vnarpsvtip ttissptnsn pisitivfse pvaglaagdi tvtngtilsi
      361 tgsgatytaq ispsvdgavk ikipenvvan ssgalnkasa eyqiiydstp ptnielsntt
      421 ieekkpigtt vgtmtatdsg saqtftyslq sgdisfftid gnvlktnapf aydtknsyki
      481 tirvtdaagn tfdkeftiqi tknhaptgti minggagytn ttnvtltmta sdlegeaiem
      541 rlsndgttws gweprlssrn wtlspgegsk tvymqlrdta gnisntlsnt ivldttppti
      601 tgvtnngvyn tdvtisfseg tatlngalft sgsivstsgn ytlvatdnag ntttvsfvid
      661 ktmpqavevt iksnnhdptk akigdtitlt iktdkniqap tvkiagkaat vngaatnwqa
      721 tymvtngdme gttpftinfk dllgtpatev tdvtdgsyvi vdsrkptvqq vtmasnnanp
      781 lvakvddiit idfvtsediq spnvtilgqt aiitdkgdgd aktwqasytl ksgdtegpis
      841 faidyrdlmg hegiqvtevs sgsivifdkk spevtayfpi hqamdvqfte nlvltfnekv
      901 lpvtnrnivi rnssdnqvve tievtqanvs iinesvtinp tleltqntay siqidagaft
      961 dlagnvyegi tdnttwnftt galptytvty dgngaeggkv pidskqyvah elikvigntg
     1021 nlmkvgytfi gwntrsdgkg viykegqtiq mgkvnlmlya vwtknivpgd ggsstpspap
     1081 epglpsnqvk vnvvdpnkpn evllqtvltr lyingeiqdt vafsianaqe flrklvklee
     1141 kqsrivipnm epsasetkvi lakeaakllv egkssfgidm rnvkieipyn smsdfnediy
     1201 frivpiksti sqedieerer algltkgtkv kvisqpltie tnlqnrqvsl llplpknlts
     1261 vqernirvyv ehsngtsell sgrlvefnkg qtgiifdvqh fstfslvhle qkelertsvp
     1321 yiqgyedgtf rpnesvtrsq maamlarsls nnnvpevtgt fyrdtahswa khdieyirtq
     1381 gimegrqdhs fgpndeitra qmaviamrwl nkqcseetta tpycnlkigd kkyhdvasth
     1441 waaqaieais emeimvgsgn gqfspdeklt raqavkvlnr ifnrpiptld sepifkdipk
     1501 ehwaffeiqa atmk
//
LOCUS       WP_257982898              48 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: NUDIX domain-containing protein [Lysinibacillus].
ACCESSION   WP_257982898
VERSION     WP_257982898.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus
  ORGANISM  Lysinibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..48
                     /organism="Lysinibacillus"
                     /db_xref="taxon:400634"
     Protein         1..48
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=5126
     Region          2..>48
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mpvilvgstv ivlnqtrevl lqfradiemw glpggamelg etleetak
//
LOCUS       WP_257982974             298 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257982974
VERSION     WP_257982974.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 298)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..298
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <1..298
                     /region_name="PRK09124"
                     /note="ubiquinone-dependent pyruvate dehydrogenase"
                     /db_xref="CDD:181661"
ORIGIN      
        1 qfpyrafypt dakiiqidin pgsigahskv dmalvgdiks tlkallplle ektdrhfldk
       61 alehyrdark glddlakpsd kaihpqylaq qishfadeda iftcdvgtpt vwaarylkmn
      121 gkrrllgsfn hgsmanampq aigakatape rqvvalcgdg gfsmlmgdfl slaqmklpvk
      181 ivifnnsvlg fvamemkagg yltdgtelhd tnfariaeac gikgirveka semdealqta
      241 frtdgpvlvd vvvakeelai ppqikleqak gfslymlrai isgrgdevie laktnwlr
//
LOCUS       WP_257982975             131 aa            linear   BCT 02-MAR-2025
DEFINITION  AIR synthase-related protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257982975
VERSION     WP_257982975.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 131)
  AUTHORS   Li,C., Kappock,T.J., Stubbe,J., Weaver,T.M. and Ealick,S.E.
  TITLE     X-ray crystal structure of aminoimidazole ribonucleotide synthetase
            (PurM), from the Escherichia coli purine biosynthetic pathway at
            2.5 A resolution
  JOURNAL   Structure 7 (9), 1155-1166 (1999)
   PUBMED   10508786
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014788.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02769.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..131
                     /product="AIR synthase-related protein"
     Region          <1..130
                     /region_name="PurM"
                     /note="Phosphoribosylaminoimidazole (AIR) synthetase
                     [Nucleotide transport and metabolism]; COG0150"
                     /db_xref="CDD:439920"
ORIGIN      
        1 gkpladhlla ptriyvksvl dliasvdvha iahltgggfw eniprvlpdn tqaiidessw
       61 qwpsvfnwlq tagnvsqhem yrtfncgvgm iialpaaead kaiallndkg enawkigyik
      121 asdseqrvvi a
//
LOCUS       WP_257983012              78 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin-binding protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257983012
VERSION     WP_257983012.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 78)
  AUTHORS   Sola,M., Kneussel,M., Heck,I.S., Betz,H. and Weissenhorn,W.
  TITLE     X-ray crystal structure of the trimeric N-terminal domain of
            gephyrin
  JOURNAL   J Biol Chem 276 (27), 25294-25301 (2001)
   PUBMED   11325967
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013183.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00994.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..78
                     /product="molybdopterin-binding protein"
     Region          <5..77
                     /region_name="MoCF_BD"
                     /note="molybdenum cofactor (MoCF) binding domain (BD).
                     This domain is found a variety of proteins involved in
                     biosynthesis of molybdopterin cofactor, like MoaB, MogA,
                     and MoeA. The domain is presumed to bind molybdopterin;
                     cl00451"
                     /db_xref="CDD:444911"
ORIGIN      
        1 mcnkrqvegf gevfrmlsfe eigtstlqsr avagvanrtl ifampgstka crtawdniia
       61 pqldartrpc nfiphlkk
//
LOCUS       WP_257983024             131 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257983024
VERSION     WP_257983024.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 131)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..131
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <1..126
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 aspgylaryg apatledlqs hlavnwvnss srqimpwrfq tpegirqiai pgklvldnse
       61 vftaaglagl gmlqgmrffl qpyidsgqlv evlpdfpapr rplsllyphr hlshkvrvfa
      121 dwlqglvatl d
//
LOCUS       WP_257983040             277 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257983040
VERSION     WP_257983040.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 277)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..277
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          <1..250
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 cwddkkvdah haiiptarss qvkltdneak vytliarqyl mqfcpdavfr kcqidleian
       61 gkfvakarfl aeagwrtllg skerdeendg tplpvvakgd ellcergevv erqtqpprhf
      121 tdatllsamt giarfvqdkd lkkilratdg lgteatragi iellfkrgfl skkgryihss
      181 eagralihsl pemagrpdmt ahwesvltqi sekqcryqdf mqplvgtlyq lidqarstpv
      241 rqfrglvapg gakksfskgk gkpkgkkaad dtapppq
//
LOCUS       WP_257983050             186 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257983050
VERSION     WP_257983050.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>186
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
     Region          9..>186
                     /region_name="PRK09841"
                     /note="tyrosine-protein kinase"
                     /db_xref="CDD:182106"
ORIGIN      
        1 nktntkdade vdlgrligef idhrklivsi talftliall yalfatpiyq adsliqveqk
       61 qgnailssls qvlpnsqpss apeitllqsr milgktvndl nlqakivqny fpifgkgwar
      121 lmgektgtis isrlyipngi edsvselelk vvdkshyivd fegkkirgev gkllnedgis
      181 lkidni
//
LOCUS       WP_257983051             144 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257983051
VERSION     WP_257983051.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 144)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>144
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          6..144
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(7..8,11,15,17..23,109..114,120..121,123..124)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176102"
ORIGIN      
        1 icirarlgrf aaqhphivvn iaarsdpfil pgsgfdaaih fehpawtgme vtflfaeyll
       61 pvchaalltd ddlpgllnrl trihrrqnpd awlhyarecg laldnpaqgp rydlhemaia
      121 avlcqqgval vpkmyvesel sagt
//
LOCUS       WP_257983133             364 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Klebsiella pneumoniae].
ACCESSION   WP_257983133
VERSION     WP_257983133.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 364)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 364)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 364)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..364
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=40341
     Region          20..352
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(131..132,135,162)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238559"
ORIGIN      
        1 mlltallatp llsyatqypl tvtdldgrqv tlakepqrii lqdgrdimtl amldrdnpfk
       61 rlvawnnlak kqdvatwqml kttwpqsati ldmgfsdkgn vdlesviarq pdlmiaqlra
      121 rpalmesgvi dklsalhvpv lfvdyeidpa kdtapsidll gkvlnresqa kaftdyyrqq
      181 lqsirqktat itpkanvfve alagnsdacc fthahsgwgg lveavganni gsqllpgasg
      241 fvslekiism kpdawimtgs krgnsqvlpl gyavkpeavk aqaqtllarp gvsqipavqe
      301 kraygvyhhf ynhpwnivgm eylakdiypq afgdlnpdet yhyivrhftd lpdqpfvfsw
      361 qqse
//
LOCUS       WP_257983145              61 aa            linear   BCT 02-MAR-2025
DEFINITION  rhodanese-like domain-containing protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257983145
VERSION     WP_257983145.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 61)
  AUTHORS   Gliubich,F., Gazerro,M., Zanotti,G., Delbono,S., Bombieri,G. and
            Berni,R.
  TITLE     Active site structural features for chemically modified forms of
            rhodanese
  JOURNAL   J Biol Chem 271 (35), 21054-21061 (1996)
   PUBMED   8702871
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00581.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..61
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>61
                     /product="rhodanese-like domain-containing protein"
     Region          1..>61
                     /region_name="sseA"
                     /note="3-mercaptopyruvate sulfurtransferase; Provisional;
                     PRK11493"
                     /db_xref="CDD:236917"
ORIGIN      
        1 mstsffvatd wlaehiddpe iqiidarmap agqealrdma aeyraghvpn alffdieals
       61 d
//
LOCUS       WP_257983193            1051 aa            linear   BCT 02-MAR-2025
DEFINITION  M1 family aminopeptidase [Pseudoalteromonas sp. MelDa3].
ACCESSION   WP_257983193
VERSION     WP_257983193.1
KEYWORDS    RefSeq.
SOURCE      Pseudoalteromonas sp. MelDa3
  ORGANISM  Pseudoalteromonas sp. MelDa3
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE   1  (residues 1 to 1051)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01433.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Pseudoalteromonas sp. MelDa3"
                     /db_xref="taxon:888435"
     Protein         1..1051
                     /product="M1 family aminopeptidase"
                     /GO_function="GO:0008237 - metallopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=118884
     Region          <768..1049
                     /region_name="GluZincin"
                     /note="Gluzincin Peptidase family (thermolysin-like
                     proteinases, TLPs) which includes peptidases M1, M2, M3,
                     M4, M13, M32 and M36 (fungalysins); cl14813"
                     /db_xref="CDD:472708"
ORIGIN      
        1 mlifnewrya vrqplvwlci iiplifsvml ssglatvevd slkqfklnit mlqmmqlpvl
       61 vgvlapvifl rdqhasmqel iyatqpslfk rslarvclli clvfiislis dlvmiymhvr
      121 qfgyisnmvs ftvfnsflvl lpnscflvvv affvchkstt slpnyvvfav lwigyimlas
      181 itgnpllags siisnrfytl ffwldpfayt avinsltnsl gasfainrvv vsmlavgify
      241 itfsknkknt llksqkgknn necvryntle paeyktarvt qkpflmmasl ykitlvnlvs
      301 hpvtlliifv wpvmvfnsva sssgyvepms imsttsldai syyafdmqll fgtllmalws
      361 wqvscfakyy niaeliaatp lktyyflnsq llvlgtmilv fltmsllgas aaqwflhsay
      421 qfevhltilf lmaivlaiia cvflcvfnlc rsqliaglli avillikftp imtylgltht
      481 lwsvgwtplq apdnfwgyra sissywpyis vwlvacislv iitgifnhrg aglsqrvmgv
      541 khfwllipll itvalftqlh lrlveekplt nshkreafka qyekafsqwr nvaqpnivhi
      601 danvdfyphq qqahfsliyt lknthqapik eilvgrsgfy kwadieidga qraksfplln
      661 qavfkfenem qpgeirklvt rfdvhqaklw pvrghqiitp efsyirsvpl lptvgyqdny
      721 eltdpilrqq halkvksvir ptklfaktak asihyqwltm sskvsttsgy qvitqgeeis
      781 rtskgdreif hfetrspina ipawvtvpys pvtkqqngvm lnvfakdkne paraesiavn
      841 lsamgdtikw lnnispyrak qlnligspsv gatgyalpql iliedsvgfr skpsanagfd
      901 qryrravhet ahqwfghdig ngvfsdsafl vesmakyiel vvieqrygka tmqalveyet
      961 tryeqsmlmn ikertalvda tqsfdqysra tivfaklraa igdepiinal klvwknhgyp
     1021 nspansmdfi ralkheagke qeslintlfl e
//
LOCUS       WP_257983268              42 aa            linear   BCT 02-MAR-2025
DEFINITION  IS3 family transposase [Planococcus sp. Urea-trap-24].
ACCESSION   WP_257983268
VERSION     WP_257983268.1
KEYWORDS    RefSeq.
SOURCE      Planococcus sp. Urea-trap-24
  ORGANISM  Planococcus sp. Urea-trap-24
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024673.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13276.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..42
                     /organism="Planococcus sp. Urea-trap-24"
                     /db_xref="taxon:2058329"
     Protein         1..42
                     /product="IS3 family transposase"
                     /calculated_mol_wt=4922
     Region          <2..>41
                     /region_name="transpos_IS3"
                     /note="IS3 family transposase; NF033516"
                     /db_xref="CDD:468052"
ORIGIN      
        1 melfekhegr ygyrrirlal qaiglvinhk kvqrimneln lt
//
LOCUS       WP_257983271             365 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: FAD-dependent oxidoreductase [unclassified
            Planococcus (in: firmicutes)].
ACCESSION   WP_257983271
VERSION     WP_257983271.1
KEYWORDS    RefSeq.
SOURCE      unclassified Planococcus (in: firmicutes)
  ORGANISM  unclassified Planococcus (in: firmicutes)
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (residues 1 to 365)
  AUTHORS   Mande,S.S., Sarfaty,S., Allen,M.D., Perham,R.N. and Hol,W.G.
  TITLE     Protein-protein interactions in the pyruvate dehydrogenase
            multienzyme complex: dihydrolipoamide dehydrogenase complexed with
            the binding domain of dihydrolipoamide acetyltransferase
  JOURNAL   Structure 4 (3), 277-286 (1996)
   PUBMED   8805537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07992.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="unclassified Planococcus (in: firmicutes)"
                     /db_xref="taxon:2662419"
     Protein         1..365
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=40146
     Region          7..360
                     /region_name="Pyr_redox_2"
                     /note="Pyridine nucleotide-disulphide oxidoreductase;
                     cl39093"
                     /db_xref="CDD:476868"
ORIGIN      
        1 mlnlkivvlv ggghahlhal aqfakkprkd iqlvlispal hqyysgmfsg fteevyglde
       61 iridlhqlae kigaafyqdt icaidpesrt ltgqygeiyp ydavsfdigs qtdspealkk
      121 hispikpnyh fpdqlmkfrt saapvivggg asgvelafst hawrmrrhfs dallfssgel
      181 lsahgaaasr kleaiarkka lsfftnvkie didetsvtas ngtsypqsdv lwltgpkspa
      241 lfersdmpvd ragflavset lqsirfpevf gagdcvsidr ypglakngvy avrqgpvlwg
      301 nllnfldgnp lsafvpqkry vailstggge afltygqwsm hgklpwklkq yidkkfmksy
      361 qaiyk
//
LOCUS       WP_257983283             216 aa            linear   BCT 02-MAR-2025
DEFINITION  aconitase family protein, partial [Klebsiella quasipneumoniae].
ACCESSION   WP_257983283
VERSION     WP_257983283.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012550.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00330.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..>216
                     /product="aconitase family protein"
     Region          1..>216
                     /region_name="PRK09277"
                     /note="aconitate hydratase AcnA"
                     /db_xref="CDD:236445"
ORIGIN      
        1 msstlreask dtlqvnaktw hyyslplaek qlgdlsrlpk slkvlmenll rwqdgdsvte
       61 ediralagwl qqahadreia yrparvlmqd ftgvpavvdl aamreavkrl ggdtakvnpl
      121 spvdlvidhs vtvdrfgdde afednvrlem ernheryafl rwgqqafsrf svvppgtgic
      181 hqvnleylgr avwseevngk wmawpdtlvg tdshtt
//
LOCUS       WP_257983306             377 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Klebsiella
            quasipneumoniae].
ACCESSION   WP_257983306
VERSION     WP_257983306.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 377)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         <1..377
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <1..377
                     /region_name="IolD"
                     /note="TPP-dependent trihydroxycyclohexane-1,2-dione
                     (THcHDO) dehydratase, myo-inositol metabolism
                     [Carbohydrate transport and metabolism]; COG3962"
                     /db_xref="CDD:443162"
ORIGIN      
        1 vvsshplnvg gvgetgclaa nllakeadlv igvgtrfsdf ttaskwifqh pevrflninv
       61 snfdawkldg iamladarea mtaldaalad sgwqagwgaq iesvqsrqlk etqrvyqavw
      121 qeksfvpeid dhldresvyr efrqitdstl tqssvlgvln etlpaeaviv aaagslpgdl
      181 qrvwrnraen tyhveygysc mgyevnaalg vklaqpqsev yslvgdgsfm mlhselvtsl
      241 qerakinvvl fdnmangcin nlqmehgmds fgtefryrqp etgqlqgglv pvdfatiaag
      301 ygcktwrvtt ldelrhalda arretvstli dikvlpktmv hkygswwnvg vaqtalseri
      361 rkvaqminek raqardy
//
LOCUS       WP_257983309             292 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Klebsiella
            quasipneumoniae].
ACCESSION   WP_257983309
VERSION     WP_257983309.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 292)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         <1..292
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <1..292
                     /region_name="MenD"
                     /note="2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-
                     carboxylate synthase [Coenzyme transport and metabolism];
                     COG1165"
                     /db_xref="CDD:440779"
ORIGIN      
        1 lwlgngkavs elaqaqivvq lgssltgkrv lqwqatcepd eywlvdnlpg rldpaqhrgr
       61 rllasidrwl elhpaekrqp wataipelar qaweaavasn epfgeaqlaq rirrylpeqg
      121 qlfvgnslvv rlidalaqlp agypvysnrg asgidgliat aagvqrasar ptlaivgdls
      181 alydlnslal lrqasaplvl ivvnnnggqi fsmlptpqde rrqfylmpqd vdfshaaamf
      241 glvyhrpadw qaldealaga wrragatvie lavnetdgtq tlqqllaqvs rl
//
LOCUS       WP_257983315             275 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Klebsiella
            quasipneumoniae].
ACCESSION   WP_257983315
VERSION     WP_257983315.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 275)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..>275
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          1..>275
                     /region_name="IolD"
                     /note="TPP-dependent trihydroxycyclohexane-1,2-dione
                     (THcHDO) dehydratase, myo-inositol metabolism
                     [Carbohydrate transport and metabolism]; COG3962"
                     /db_xref="CDD:443162"
ORIGIN      
        1 mgklrlttaq alvkfldnqy levdgeelkf vkgifaifgh gnvlglgqal eqdsgdmrvy
       61 qgrneqgmah aatgfarqal rrqiiactss igpgaanmit aagtasanri pllllpgdvf
      121 atrqpdpvlq qieqsydlsi stndafravs kywdritrpe qlmsacinam rvltdpaetg
      181 avtlclpqdv qgeawdypes ffarrvhrld rrpasaaqla davaaikasr kplivcgggv
      241 kysgageals rfaerygvpf aetqagkgtv vsshp
//
LOCUS       WP_257982872             430 aa            linear   BCT 02-MAR-2025
DEFINITION  NEAT domain-containing protein [Lysinibacillus fusiformis].
ACCESSION   WP_257982872
VERSION     WP_257982872.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus fusiformis
  ORGANISM  Lysinibacillus fusiformis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 430)
  AUTHORS   Sheldon,J.R. and Heinrichs,D.E.
  TITLE     Recent developments in understanding the iron acquisition
            strategies of gram positive pathogens
  JOURNAL   FEMS Microbiol Rev 39 (4), 592-630 (2015)
   PUBMED   25862688
REFERENCE   2  (residues 1 to 430)
  AUTHORS   Honsa,E.S., Maresso,A.W. and Highlander,S.K.
  TITLE     Molecular and evolutionary analysis of NEAr-iron Transporter (NEAT)
            domains
  JOURNAL   PLoS One 9 (8), e104794 (2014)
   PUBMED   25153520
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016890.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05031.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Lysinibacillus fusiformis"
                     /db_xref="taxon:28031"
     Protein         1..430
                     /product="NEAT domain-containing protein"
                     /calculated_mol_wt=48416
     Region          171..>327
                     /region_name="NEAT"
                     /note="Heme-binding NEAT domain [Inorganic ion transport
                     and metabolism]; COG5386"
                     /db_xref="CDD:444149"
ORIGIN      
        1 milkknnlci vavctillif fspfifleae aeesviadgs yqvelsfspi egfegsifkq
       61 vatlavkdgq yqltmkleel npirdihieq qgnelsftld kienlvqfdv lalqqpivlk
      121 gnielateeq yasfsqelrl kvqtlspnip qgegseevae ginsegtmgq ewsldyelmv
      181 dgkqepsimn syvnpvakvi ekdgryyaqm tilqsawitg ltvdykgqqv epkllslldn
      241 vrivefeved ltqplrlwvk idipdisyhh qyfvqlvfdp aqvakildkp seevssepkd
      301 sdktaeivgk eqvqkqvqtp leqnnvkkea nsatstvptt qsmlvvpqee klafdrtlde
      361 svdeaeeeaa eenkkeevat dkvvnhstvk qqieplnivk imlliaiclv sgwllirrik
      421 kakkdrteqk
//
LOCUS       WP_257983317             400 aa            linear   BCT 02-MAR-2025
DEFINITION  BapA/Bap/LapF family prefix-like domain-containing protein
            [Klebsiella quasipneumoniae].
ACCESSION   WP_257983317
VERSION     WP_257983317.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 400)
  AUTHORS   Yoshida,K., Toyofuku,M., Obana,N. and Nomura,N.
  TITLE     Biofilm formation by Paracoccus denitrificans requires a type I
            secretion system-dependent adhesin BapA
  JOURNAL   FEMS Microbiol Lett 364 (4) (2017)
   PUBMED   28158695
REFERENCE   2  (residues 1 to 400)
  AUTHORS   Latasa,C., Roux,A., Toledo-Arana,A., Ghigo,J.M., Gamazo,C.,
            Penades,J.R. and Lasa,I.
  TITLE     BapA, a large secreted protein required for biofilm formation and
            host colonization of Salmonella enterica serovar Enteritidis
  JOURNAL   Mol Microbiol 58 (5), 1322-1339 (2005)
   PUBMED   16313619
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046917.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22783.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..400
                     /product="BapA/Bap/LapF family prefix-like
                     domain-containing protein"
                     /calculated_mol_wt=40745
     Region          4..66
                     /region_name="biofilm_BapA_N"
                     /note="BapA prefix-like domain; NF033677"
                     /db_xref="CDD:411274"
ORIGIN      
        1 mkninitakd tgvkytidgn qvnlntqsvv vlhikredis sfsrqgndlv lkindgstlt
       61 lknffvndas ghhsdlvlqd ddsgalwwle gagtsdahys lisdisgllv agssggsiap
      121 wvmagaallg vgamiagssd kdhsshsnid dtdsdadsds dsdsdsdtdp ggsesdadad
      181 sdsdsdsdsd adsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd
      241 sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdadsd sdsdsdsdsd sdsdsdsdsd
      301 adsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdadsdsd
      361 sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd
//
LOCUS       WP_257983348              84 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5675 family protein, partial [Vibrio parahaemolyticus].
ACCESSION   WP_257983348
VERSION     WP_257983348.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040141.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18925.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>84
                     /product="DUF5675 family protein"
ORIGIN      
        1 mtskkskatl nlrrikqyge ttlgkltidg vdkswfilep ggpdsivegs dkrisagtyk
       61 mepfsgtkyk nvyelknvpg rtyv
//
LOCUS       WP_257983352             144 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257983352
VERSION     WP_257983352.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 144)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         <1..>144
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          1..>140
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(1,5,7..13,106..111,117..118,120..121)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176109"
ORIGIN      
        1 senapnielt iedwneltpd rinnqlvhfg ihyfplnlnk nlvqrkvgkd msvmvcrkdh
       61 pinnesisle tiasyplaih lqkhwnerqd klsrlllshg idfkvklktt hinviinave
      121 ttdllfpcsi yiaeqlgekf syit
//
LOCUS       WP_257983354              55 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257983354
VERSION     WP_257983354.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 55)
  AUTHORS   Xiong,Y. and Eickbush,T.H.
  TITLE     Origin and evolution of retroelements based upon their reverse
            transcriptase sequences
  JOURNAL   EMBO J 9 (10), 3353-3362 (1990)
   PUBMED   1698615
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00078.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..55
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>55
                     /product="reverse transcriptase domain-containing protein"
     Region          <2..>55
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            13
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:238185"
ORIGIN      
        1 mkknresqgi pqgspmsgll sniymidfdi klknyaesln gkyyrycddl lcilp
//
LOCUS       WP_257983360              98 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257983360
VERSION     WP_257983360.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 98)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 98)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 98)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 98)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..98
                     /product="ATP-binding protein"
     Region          <11..84
                     /region_name="HATPase"
                     /note="Histidine kinase-like ATPase domain; cl00075"
                     /db_xref="CDD:469604"
     Site            order(15,17,19,21,49..52,68,70,75..76,78)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340391"
     Site            order(31,52)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340391"
ORIGIN      
        1 vtltrdavgd itlhvldegp gipeaslqav lqpfyrleds rnrdtggtgl glaiaaqlvs
       61 qmdgalrlan rpqggldasv rlaaaglypd vspgktdn
//
LOCUS       WP_257983361             216 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein,
            partial [Klebsiella pneumoniae].
ACCESSION   WP_257983361
VERSION     WP_257983361.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 216)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>216
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
     Region          <1..212
                     /region_name="PRK10795"
                     /note="penicillin-binding protein 2; Provisional"
                     /db_xref="CDD:236761"
ORIGIN      
        1 pgtqrryrdw lktghgmlnv tkaieesadt ffyqvafemg idrihewlsk fgygqstgid
       61 lneeyagvlp srewkqrvhk kpwyqgdtis vgigqgywia tpiqmvkalt tllnngkvqd
      121 phllysmkqg nhveryqqpa nlpqvgdpks pywgivrngm ygmanqpngt gyklfhtapy
      181 qiaaksgtsq vfslkqnqty nakmipvrlr dhifyt
//
LOCUS       WP_257983367             161 aa            linear   BCT 02-MAR-2025
DEFINITION  pyridoxal-dependent decarboxylase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257983367
VERSION     WP_257983367.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 161)
  AUTHORS   Viguera,E., Trelles,O., Urdiales,J.L., Mates,J.M. and
            Sanchez-Jimenez,F.
  TITLE     Mammalian L-amino acid decarboxylases producing 1,4-diamines:
            analogies among differences
  JOURNAL   Trends Biochem Sci 19 (8), 318-319 (1994)
   PUBMED   7940675
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012503.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00282.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>161
                     /product="pyridoxal-dependent decarboxylase"
                     /GO_function="GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA]"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0019752 - carboxylic acid metabolic
                     process [Evidence IEA]"
     Region          20..>161
                     /region_name="GadA"
                     /note="Glutamate or tyrosine decarboxylase or a related
                     PLP-dependent protein [Amino acid transport and
                     metabolism]; COG0076"
                     /db_xref="CDD:439846"
ORIGIN      
        1 mtamstlnpi lagsaqsvea yqqvieqtsq avvqwlkqpe myqgksvdel rerislefne
       61 qglgnqaaid raieyflkds lsvhhpqcva hlhcpslvis qaaevlinat nqsmdswdqs
      121 psatiiemkl iewlrarvgf pagdagvfts ggtqsnlmgl m
//
LOCUS       WP_257983389             146 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257983389
VERSION     WP_257983389.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 146)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 146)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>146
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          5..>146
                     /region_name="GlpK"
                     /note="Glycerol kinase [Energy production and conversion];
                     COG0554"
                     /db_xref="CDD:440320"
ORIGIN      
        1 msvnkdiiia ldegttnaka vafdshgrvi aqfsraleia tpqegwveqs aelllaasle
       61 visrtvaavg aervaalais nqretvvgwy retgeaiapa lswqcsrtaa fchmlreqgh
      121 epqikavtgl pvaplfsask mrwlld
//
LOCUS       WP_257983430              94 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257983430
VERSION     WP_257983430.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 94)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 94)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 94)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 94)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..94
                     /product="ATP-binding protein"
     Region          <1..92
                     /region_name="PRK11086"
                     /note="sensory histidine kinase DcuS; Provisional"
                     /db_xref="CDD:236839"
ORIGIN      
        1 mdgqaegeig lllhyqdgwl sgevsddgpg ipennidaif nkgfstkgen rgvglflanq
       61 qlrelggtla vesepgvftq ffvhlpwdsk rkpa
//
LOCUS       WP_257983468             108 aa            linear   BCT 02-MAR-2025
DEFINITION  pseudouridine synthase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257983468
VERSION     WP_257983468.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 108)
  AUTHORS   Wrzesinski,J., Nurse,K., Bakin,A., Lane,B.G. and Ofengand,J.
  TITLE     A dual-specificity pseudouridine synthase: an Escherichia coli
            synthase purified and cloned on the basis of its specificity for
            psi 746 in 23S RNA is also specific for psi 32 in tRNA(phe)
  JOURNAL   RNA 1 (4), 437-448 (1995)
   PUBMED   7493321
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013045.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00849.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>108
                     /product="pseudouridine synthase"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /GO_process="GO:0001522 - pseudouridine synthesis
                     [Evidence IEA]"
                     /GO_process="GO:0009451 - RNA modification [Evidence IEA]"
     Region          1..>108
                     /region_name="PseudoU_synth"
                     /note="Pseudouridine synthases catalyze the isomerization
                     of specific uridines in an RNA molecule to pseudouridines
                     (5-ribosyluracil, psi); cl00130"
                     /db_xref="CDD:469624"
     Site            61..64
                     /site_type="active"
                     /db_xref="CDD:211346"
ORIGIN      
        1 mamenynppq dpwlvilyqd ehimvvnkps gllsvpgrle ehkdsvmtri qrdfpqaesv
       61 hrldmatsgv ivvalnkaae relkrqfrer epkkqyvarv wggpparg
//
LOCUS       WP_257983501             361 aa            linear   BCT 02-MAR-2025
DEFINITION  cellulase family glycosylhydrolase [Klebsiella michiganensis].
ACCESSION   WP_257983501
VERSION     WP_257983501.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012377.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00150.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Klebsiella michiganensis"
                     /db_xref="taxon:1134687"
     Protein         1..361
                     /product="cellulase family glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0000272 - polysaccharide catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=40772
     Region          103..>265
                     /region_name="agarase_cat"
                     /note="alpha-beta barrel catalytic domain of agarase, such
                     as GH86-like endo-acting agarases identified in non-marine
                     organisms; cd21510"
                     /db_xref="CDD:411072"
ORIGIN      
        1 maaslsgkvc ylflmltlch ttavrafefg igthianyke ssdfyiqkvk sygfnsvrde
       61 lywndvekqn gvfiippnra ktdqyfqnlq ssnvssllvl dygnnihtkg gfpsntqqia
      121 qfasyaawia nrykgkvkyy evwnewylgt gisswfqkka kpddaiyfel ikatsesikr
      181 idpsakviag sfnplkkpei kwfdnfidmg vlkyidgvsv hpysygnndm klrtpegnis
      241 aiddyeqhlk kktgkdvdiy itevgyptns tsggvdpkla arymikytfl akqrdyikgi
      301 wwytlmnsad ntsnresnfg ilmhnesekp sakclkqnel liagaltnkk naspsitcsg
      361 q
//
LOCUS       WP_257983561             214 aa            linear   BCT 02-MAR-2025
DEFINITION  lyase family protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257983561
VERSION     WP_257983561.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00206.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..214
                     /product="lyase family protein"
     Region          <1..214
                     /region_name="PRK09285"
                     /note="adenylosuccinate lyase; Provisional"
                     /db_xref="CDD:236452"
ORIGIN      
        1 pyttqiephd yiaelfdcia rfntilidfd rdvwgyialn hfkqktiage igsstmphkv
       61 npidfenseg nlglanavmq hlasklpvsr wqrdltdstv lrnlgvgigy aliayqstlk
      121 gisklelnqd rlldeldhnw evlaepiqtv mrrygiekpy eklkeltrgk rvdaegmkqf
      181 idslalpeee kvrlkamtpa nyigrattmv delk
//
LOCUS       WP_257983573             158 aa            linear   BCT 02-MAR-2025
DEFINITION  protein-disulfide reductase DsbD domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257983573
VERSION     WP_257983573.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 158)
  AUTHORS   Bushweller,J.H.
  TITLE     Protein Disulfide Exchange by the Intramembrane Enzymes DsbB, DsbD,
            and CcdA
  JOURNAL   J Mol Biol 432 (18), 5091-5103 (2020)
   PUBMED   32305461
REFERENCE   2  (residues 1 to 158)
  AUTHORS   Smith,R.P., Whitten,A.E., Paxman,J.J., Kahler,C.M., Scanlon,M.J.
            and Heras,B.
  TITLE     Production, biophysical characterization and initial
            crystallization studies of the N- and C-terminal domains of DsbD,
            an essential enzyme in Neisseria meningitidis
  JOURNAL   Acta Crystallogr F Struct Biol Commun 74 (Pt 1), 31-38 (2018)
   PUBMED   29372905
REFERENCE   3  (residues 1 to 158)
  AUTHORS   Goulding,C.W., Sawaya,M.R., Parseghian,A., Lim,V., Eisenberg,D. and
            Missiakas,D.
  TITLE     Thiol-disulfide exchange in an immunoglobulin-like fold: structure
            of the N-terminal domain of DsbD
  JOURNAL   Biochemistry 41 (22), 6920-6927 (2002)
   PUBMED   12033924
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022853.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11412.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>158
                     /product="protein-disulfide reductase DsbD
                     domain-containing protein"
     Region          4..>158
                     /region_name="dipZ"
                     /note="thiol:disulfide interchange protein precursor;
                     Provisional; PRK00293"
                     /db_xref="CDD:234717"
ORIGIN      
        1 mayriitlil llcstsatag lfdapgrsnf vpadqafafd fqqqqhdvnl swqikdgyyl
       61 yrqqftfsaa gatidepalp agewhedefy gkseifrqrl tvpvtvkead keatltvtwq
      121 gcadagfcyp petkviplsa vraasndaqp taaapvss
//
LOCUS       WP_257983641             394 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase family 18 protein, partial [Klebsiella oxytoca].
ACCESSION   WP_257983641
VERSION     WP_257983641.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella oxytoca
  ORGANISM  Klebsiella oxytoca
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (residues 1 to 394)
  AUTHORS   Perrakis,A., Tews,I., Dauter,Z., Oppenheim,A.B., Chet,I.,
            Wilson,K.S. and Vorgias,C.E.
  TITLE     Crystal structure of a bacterial chitinase at 2.3 A resolution
  JOURNAL   Structure 2 (12), 1169-1180 (1994)
   PUBMED   7704527
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00704.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Klebsiella oxytoca"
                     /db_xref="taxon:571"
     Protein         <1..394
                     /product="glycosyl hydrolase family 18 protein"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <1..160
                     /region_name="ChiA"
                     /note="Chitinase, GH18 family [Carbohydrate transport and
                     metabolism]; COG3325"
                     /db_xref="CDD:442554"
     Region          342..390
                     /region_name="ChiC_BD"
                     /note="Chitin-binding domain of chitinase C; cd12215"
                     /db_xref="CDD:213178"
ORIGIN      
        1 hhtnlnalee ggwavntivd hllaegfpsd rinigyaays rngrnaeles lsplkgtynp
       61 gtgttvgtfe sgttewydti ynyldlenqk grngfnvytd qvanadylyn petklfmsld
      121 tprtvkakge yaaslglgal ftwtidqdng vlvnaaregl gyemasevid mepfyfegin
      181 veptdeadet deneeddvqp epavnhapka aielmvvggs rvrlsgekss dedsddlsfs
      241 wgvpaaiava dktaaviefd vpkvsedtef tftlfvrdtw gepstqqrfv lsvvaatqsd
      301 dsedesedkn ddepaddqdn sddqpqpadd dvvpsdettp yplwnastvy ggnwgtfetv
      361 swkghnyqvk wwsqgdqpdl ncgqfavwsd lgay
//
LOCUS       WP_257983642            1699 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Klebsiella oxytoca].
ACCESSION   WP_257983642
VERSION     WP_257983642.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella oxytoca
  ORGANISM  Klebsiella oxytoca
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..1699
                     /organism="Klebsiella oxytoca"
                     /db_xref="taxon:571"
     Protein         1..>1699
                     /product="Ig-like domain-containing protein"
     Region          <394..876
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          883..979
                     /region_name="Big_13"
                     /note="Bacterial Ig-like domain; pfam19077"
                     /db_xref="CDD:465968"
ORIGIN      
        1 mygniganpd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd
       61 sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd
      121 sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd
      181 sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd
      241 sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd
      301 sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd
      361 sdsdsdteap taaqnitvnd nvgsitgvlh sgdvtddttp eikgtaeaga titiydgdtv
      421 lgsvvvdqdg nwsftlpels egphslsatv tdkagnvser spvfeltidt tapsasapev
      481 tddvaghtgp ltsgdltnda tptlsgtaea gatvtiydgd tvlgtvvage dgrwsytpdt
      541 ldegdhslst tvtdkagnvs erspafeltv dtvvtpvsdl qvtddvaght gpltsgdltn
      601 datpalsgta eagatvtiyd gdtvlgtvva gedgrwsytp dtldegdhsl sttvtdkagn
      661 vserspafei tvdttvtpvs glqvtddvag htgplasgdl tndatpalsg taeagatvti
      721 ydgdtvlgtv vagedgrwsy tpdtlnegdh slsttvtdka gnvserspaf eltvdtvvtp
      781 vsdlqvtddv aghtgplasg dltndatpal sgtaeagatv tiydgdtvlg tvvtgedgrw
      841 tftpdtlneg dhslsttvtd kagnvsersp afeltvdtiv npvsdlqvtd nagedtgtln
      901 sgnvtdddtp tlsgtaeaga tvtiydgdtv lgtvvagedg rwsftpdald egshslsttv
      961 tdlagnvser sptfeltvdl sddtdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds
     1021 dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds
     1081 dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds
     1141 dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds
     1201 dsdsdsdsds dsdsdsdsds dsdsdsdads dsdsdsdads dsdsdsdsds dsdsdsdsds
     1261 dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds
     1321 dsdsdsdsds dsdadsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds
     1381 dsdsdsdsda dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds
     1441 dsdadsdsdp dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds
     1501 dsdsdsdsda dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds
     1561 dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds
     1621 dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds
     1681 dsdsdsdsds dsdsdsdsd
//
LOCUS       WP_257983646             282 aa            linear   BCT 02-MAR-2025
DEFINITION  integrase core domain-containing protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257983646
VERSION     WP_257983646.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025063.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13683.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..282
                     /product="integrase core domain-containing protein"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <1..34
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
     Region          <68..244
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 dlnlfnqrma eylvlynskr phkslelmtp vdyilreskn cnmwwthtia gahdkmrmip
       61 vrlsargkar likkrsvkpr rpkqyrpvkt geligmdaie lrmgdlrryi itmidehsdy
      121 alalavpsln sditshffsk atklfpvair qvvtdngkef lgnfdktlqe asikhiwtyp
      181 ytpkmnatce rfnrtlreqf iefnelllfe dlnlfnqrma eylvlynskr phkslelmtp
      241 vdyilreskn cnmwwthtsp cltaakrllc wclvkqmasc vy
//
LOCUS       WP_257983651             132 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6392 family protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257983651
VERSION     WP_257983651.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040077.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19929.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..132
                     /product="DUF6392 family protein"
     Region          <1..115
                     /region_name="DUF6392"
                     /note="Family of unknown function (DUF6392); pfam19929"
                     /db_xref="CDD:437761"
ORIGIN      
        1 diyrldmkre gvflsffnnq dknlkevalr ledenktdwl fpnllpfgle pvmtqrwvrn
       61 rfghpityva anvimtiyvg veqtyilptp nqniaaafsy nnvlfvnrit fipverakei
      121 qsalekkrlg gk
//
LOCUS       WP_257983662             682 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6020 family protein [Gardnerella pickettii].
ACCESSION   WP_257983662
VERSION     WP_257983662.1
KEYWORDS    RefSeq.
SOURCE      Gardnerella pickettii
  ORGANISM  Gardnerella pickettii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Gardnerella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039324.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19484.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Gardnerella pickettii"
                     /db_xref="taxon:2914924"
     Protein         1..682
                     /product="DUF6020 family protein"
                     /calculated_mol_wt=76791
     Region          9..639
                     /region_name="DUF6020"
                     /note="Family of unknown function (DUF6020); pfam19484"
                     /db_xref="CDD:466106"
ORIGIN      
        1 mkrintgant askiaansli vftciflatc tslgviyraq gcltdfnwln alifviafca
       61 yyailrvliy fgkngvmpki vrfmraessq aelspekski kqsqpnqsks kiattlrtaf
      121 fnakraakwc fyrstcrkrn ifltliigwl wapatllaay gadicsqire yswawnqvtg
      181 lkqpyigffs fvpadiypta hylwpakpty lsdqhnivlt liygataavs ryftesndag
      241 ivllavmqfv laafccaata nrflntpwak gktsesqavc tstpiastpi alraaviitf
      301 lfsplvvfst isltksplfa fafvwwfgim yelnrlefkq kpaahtivel iisvcimlia
      361 akyawyilai qfvlliisnr krwkiwvlci llptilihga imlaissgai ingdpiesrg
      421 vqlqqiaria kldpksipha akraispifn lsqtaeaytp qdadpvkssg lqskkvsyrw
      481 ryitkddmkk fnhawllmit hspivatdal laksygyfdi ldvpyvgpey yvntenikns
      541 ewirywlpew rgavsssaes wsntpilgwi ihgnlyvvat lligvaeial rrwktlvlha
      601 plallmgvmv lapannferh mlpiafvfff tvlmfirdsg yntcrsrcrq sdkincdlah
      661 dntredshnn thykthedsh kn
//
LOCUS       WP_257983684             230 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257983684
VERSION     WP_257983684.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 230)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 230)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>230
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          3..>230
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mylgidlgts evkalviden heviashsap lsiqrphphw seqapelwwe ateylmatlr
       61 ekcaqhwpai kaiglsgqmh gavlldaege airpailwnd trcaaecael eamapelhqv
      121 agnlampgft apkllwvrrh epqhfqrtat vllpkdylry rmtgkkvsdm sdaagtlwld
      181 vakrdwsdal ldkcglsrsq mptlvegcei satldpqvaa rwglnasvvv
//
LOCUS       WP_257983685             657 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA cytosine methyltransferase [Klebsiella pneumoniae].
ACCESSION   WP_257983685
VERSION     WP_257983685.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012372.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00145.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..657
                     /product="DNA cytosine methyltransferase"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=70830
     Region          7..>251
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
     Region          <580..644
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
ORIGIN      
        1 mkdseiivdn faggggastg ielaigrsvd iainhdpnav amhttnhpgt lhycesvysv
       61 rpkvatagrs vglawfspdc rhfskakgak pvekairgla wivirwaldv gprvmmlenv
      121 eefktwgpll avemrpdpdr igetflafvg mltsgvpadh palleccefl elspdseqak
      181 rlvaglgyvv dfrelracdy gaptirkrff mvmrrdgqpi vwpeathgdp kspavlagkl
      241 apwrtaaeci dwsipapsif grkkplaent lrriargiqr fviesaspfi vkcnhtttrg
      301 kydcfrgqal ddplqtitkt hgyaiavphl tkfrtgatgq pvtdpvptvt agtsrrpggn
      361 ghalgiveag lvpflagngg seyqakprpl dkpahtilke sracvvtpvi arqfgasvgh
      421 radepsatit aggggksqlv saflakhygg nyqgagidrg epahsvttvd hhalvtaqiv
      481 gvggragqsr prdvseplqt mttkadaamv tshliklrgt crdgqttdep mptitaggqh
      541 vgevkttlav edydeeraqq vlaflqkycg edstglvdig gvtyrivdig mrmlqphely
      601 raqgfpewyi idqdyrgvky akdkqvarcg navpppfaea lvranlpemc lkkdiaa
//
LOCUS       WP_257983706              60 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP cone domain-containing protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257983706
VERSION     WP_257983706.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 60)
  AUTHORS   Aravind,L., Wolf,Y.I. and Koonin,E.V.
  TITLE     The ATP-cone: an evolutionarily mobile, ATP-binding regulatory
            domain
  JOURNAL   J Mol Microbiol Biotechnol 2 (2), 191-194 (2000)
   PUBMED   10939243
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03477.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..60
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..60
                     /product="ATP cone domain-containing protein"
     Region          <1..60
                     /region_name="NrdR"
                     /note="Transcriptional regulator NrdR, contains Zn-ribbon
                     and ATP-cone domains [Transcription]; COG1327"
                     /db_xref="CDD:440938"
ORIGIN      
        1 hikthlrgtg erevaskmig nlvmeqlkkl dkvayirfas vyrsfedike fgeeiarlqd
//
LOCUS       WP_257983717             167 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257983717
VERSION     WP_257983717.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 167)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..167
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          1..161
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 cpqvditlit qptrqltegv ltaaldaalv clppgadgqp acpdelaftp vfyetlmlvr
       61 pqtpgplrfa afasgcsyra lgerwlaeqq aavevhevns yhsmlacvas gryacllpqs
      121 vlslmtlpen clseplceat tqliwrsgls apalsewrkl lqsvaig
//
LOCUS       WP_257983708             165 aa            linear   BCT 02-MAR-2025
DEFINITION  OB-fold nucleic acid binding domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257983708
VERSION     WP_257983708.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 165)
  AUTHORS   Koonin,E.V., Wolf,Y.I. and Aravind,L.
  TITLE     Protein fold recognition using sequence profiles and its
            application in structural genomics
  JOURNAL   Adv Protein Chem 54, 245-275 (2000)
   PUBMED   10829230
REFERENCE   2  (residues 1 to 165)
  AUTHORS   Bochkarev,A., Pfuetzner,R.A., Edwards,A.M. and Frappier,L.
  TITLE     Structure of the single-stranded-DNA-binding domain of replication
            protein A bound to DNA
  JOURNAL   Nature 385 (6612), 176-181 (1997)
   PUBMED   8990123
REFERENCE   3  (residues 1 to 165)
  AUTHORS   Keshav,K.F., Chen,C. and Dutta,A.
  TITLE     Rpa4, a homolog of the 34-kilodalton subunit of the replication
            protein A complex
  JOURNAL   Mol Cell Biol 15 (6), 3119-3128 (1995)
   PUBMED   7760808
REFERENCE   4  (residues 1 to 165)
  AUTHORS   Ruff,M., Krishnaswamy,S., Boeglin,M., Poterszman,A., Mitschler,A.,
            Podjarny,A., Rees,B., Thierry,J.C. and Moras,D.
  TITLE     Class II aminoacyl transfer RNA synthetases: crystal structure of
            yeast aspartyl-tRNA synthetase complexed with tRNA(Asp)
  JOURNAL   Science 252 (5013), 1682-1689 (1991)
   PUBMED   2047877
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013499.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01336.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>165
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
     Region          1..>165
                     /region_name="asnC"
                     /note="asparaginyl-tRNA synthetase; Validated; PRK03932"
                     /db_xref="CDD:235176"
ORIGIN      
        1 msvvpvadvl qgrvavdsev tvrgwvrtrr dskagfsfla vydgscfdpv qavinnslpn
       61 ynqevlrltt gcsvivtgkv vasqgqgqsf eiqatsvevt gwvedpdtyp maakrhsiey
      121 lrevahlrpr tnligavarv rhtlaqalhr ffneqgffwv stpli
//
LOCUS       WP_257983728             216 aa            linear   BCT 02-MAR-2025
DEFINITION  lyase family protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257983728
VERSION     WP_257983728.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00206.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>216
                     /product="lyase family protein"
     Region          2..>216
                     /region_name="PRK09053"
                     /note="3-carboxy-cis,cis-muconate cycloisomerase;
                     Provisional"
                     /db_xref="CDD:181627"
ORIGIN      
        1 mslltpmlrs spltdwfsda qrvqgmldfe aalaqaqaac gmvppeavgp ivaacrheai
       61 dfaalgeaav gagnlaiplv kqltaqvkaq dpeaaryvhw gatsqdaidt glvlqlrgal
      121 daaetlleql laalalqadr yrdavmpgrt wmqhalpvtf glklagtlda llrwqqrlre
      181 mrprllvlqf ggaagtldal kekgpavgla laqilg
//
LOCUS       WP_257983727             185 aa            linear   BCT 02-MAR-2025
DEFINITION  GMC oxidoreductase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257983727
VERSION     WP_257983727.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05199.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..185
                     /product="GMC oxidoreductase"
                     /GO_function="GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
     Region          <1..185
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 nyngsnavke hgfqchvgsm rspsrghvrl ksrdphahpa ilfnymsheq dwqefrdair
       61 itreimnqpa ldkyrgreis pgiecqsdae ldefvrnhae tafhpcgtck mgydemavvd
      121 gegrvhgleg lrvvdasimp qiitgnlnat timigekmad airgrqplpr statyyvagd
      181 apvrr
//
LOCUS       WP_257983744             246 aa            linear   BCT 02-MAR-2025
DEFINITION  integrase core domain-containing protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257983744
VERSION     WP_257983744.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025063.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13683.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>246
                     /product="integrase core domain-containing protein"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <1..28
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
     Region          <62..238
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 qrmaeylvly nskrphksle lmtpvdyilr eskncnmwwt htiagahdkm rmipvrlsar
       61 gkarlikkrs vkprrpkqyr pvktgeligm daielrmgdl rryiitmide hsdyalalav
      121 pslnsditsh ffskatklfp vairqvvtdn gkeflgnfdk tlqeasikhi wtypytpkmn
      181 atcerfnrtl reqfiefnel llfedlnlfn qrmaeylvly nskrphksle lmtpvdyilr
      241 eskncn
//
LOCUS       WP_257983745             137 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY-family carbohydrate kinase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257983745
VERSION     WP_257983745.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 137)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 137)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02782.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..137
                     /product="FGGY-family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <1..123
                     /region_name="XylB"
                     /note="Sugar (pentulose or hexulose) kinase [Carbohydrate
                     transport and metabolism]; COG1070"
                     /db_xref="CDD:440688"
ORIGIN      
        1 sphttraelq ravfeglafa ivdalqgypq ggelyltggg aasatwlqii adctgrtvvs
       61 safnelsarg aailaarsva alaetpplaq tryqprpqah aryaalypvy rllreqmlpv
      121 wqarqaalqp lsqdlqp
//
LOCUS       WP_257983746             217 aa            linear   BCT 02-MAR-2025
DEFINITION  pyruvate kinase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257983746
VERSION     WP_257983746.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 217)
  AUTHORS   Yuan,M., McNae,I.W., Chen,Y., Blackburn,E.A., Wear,M.A.,
            Michels,P.A.M., Fothergill-Gilmore,L.A., Hupp,T. and
            Walkinshaw,M.D.
  TITLE     An allostatic mechanism for M2 pyruvate kinase as an amino-acid
            sensor
  JOURNAL   Biochem J 475 (10), 1821-1837 (2018)
   PUBMED   29748232
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 217)
  AUTHORS   Munoz,M.E. and Ponce,E.
  TITLE     Pyruvate kinase: current status of regulatory and functional
            properties
  JOURNAL   Comp Biochem Physiol B Biochem Mol Biol 135 (2), 197-218 (2003)
   PUBMED   12798932
REFERENCE   3  (residues 1 to 217)
  AUTHORS   Valentini,G., Chiarelli,L.R., Fortin,R., Dolzan,M., Galizzi,A.,
            Abraham,D.J., Wang,C., Bianchi,P., Zanella,A. and Mattevi,A.
  TITLE     Structure and function of human erythrocyte pyruvate kinase.
            Molecular basis of nonspherocytic hemolytic anemia
  JOURNAL   J Biol Chem 277 (26), 23807-23814 (2002)
   PUBMED   11960989
REFERENCE   4  (residues 1 to 217)
  AUTHORS   Larsen,T.M., Benning,M.M., Wesenberg,G.E., Rayment,I. and Reed,G.H.
  TITLE     Ligand-induced domain movement in pyruvate kinase: structure of the
            enzyme from rabbit muscle with Mg2+, K+, and L-phospholactate at
            2.7 A resolution
  JOURNAL   Arch Biochem Biophys 345 (2), 199-206 (1997)
   PUBMED   9308890
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012449.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00224.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>217
                     /product="pyruvate kinase"
                     /GO_function="GO:0000287 - magnesium ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0004743 - pyruvate kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0030955 - potassium ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006096 - glycolytic process [Evidence
                     IEA]"
     Region          <1..217
                     /region_name="Pyruvate_Kinase"
                     /note="Pyruvate kinase (PK): Large allosteric enzyme that
                     regulates glycolysis through binding of the substrate,
                     phosphoenolpyruvate, and one or more allosteric effectors.
                     Like other allosteric enzymes, PK has a high substrate
                     affinity R state and a low...; cl39076"
                     /db_xref="CDD:453956"
ORIGIN      
        1 gveipveevi faqkmiiekc irarkvvita tqmldsmikn prptraeagd vanaildgtd
       61 avmlsgesak gkypleavti maticertdr vmtsrldfnn dnrklritea vcrgavetae
      121 kleaplivva tqggksarav rkyfpdatil alttnettar qlvlskgvvp qlveeiastd
      181 dfyhlgkdla lksglarkgd vvvmvsgalv psgttnt
//
LOCUS       WP_257983747             211 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257983747
VERSION     WP_257983747.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 211)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 211)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>211
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <2..211
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 lffakdwirf rltgvaalel tdasssllnq qtgswssvvm nemglnellp lfppllapda
       61 pagtlsdava altglpaatp vaagaldvcs aalgcgavne gdiytilgtt cctgivcrgp
      121 qtvneatrfv thteagqvis lfpmqagtpn idwlqqhisl dadlgrleqa iaavepgsgg
      181 vfwqpylnge rapfyspdar agffgispht t
//
LOCUS       WP_257983769             927 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Gardnerella
            vaginalis].
ACCESSION   WP_257983769
VERSION     WP_257983769.1
KEYWORDS    RefSeq.
SOURCE      Gardnerella vaginalis
  ORGANISM  Gardnerella vaginalis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Gardnerella.
REFERENCE   1  (residues 1 to 927)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 927)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 927)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 927)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Gardnerella vaginalis"
                     /db_xref="taxon:2702"
     Protein         1..927
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=104136
     Region          <344..>404
                     /region_name="FepC"
                     /note="ABC-type cobalamin/Fe3+-siderophores transport
                     system, ATPase component [Inorganic ion transport and
                     metabolism, Coenzyme transport and metabolism]; COG1120"
                     /db_xref="CDD:440737"
     Region          <380..440
                     /region_name="ABC_ATPase"
                     /note="ATP-binding cassette transporter nucleotide-binding
                     domain; cd00267"
                     /db_xref="CDD:213179"
     Site            380..389
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213179"
     Site            400..405
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213179"
     Site            408..411
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213179"
     Site            431..437
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213179"
     Region          489..>825
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
ORIGIN      
        1 mpqvlsvfit gliqlagmll liytmgslhs astllegfva fklalsfflq algfivkdrc
       61 emllialfrq ltfhrfvrls vqnnddetlq ssaltypnqi sqiaygvdfv lsilqfiilf
      121 aicvvqyhen sivavlllvl lcvgnlflir wigvlwknyv dlegkrrnll skiidklpha
      181 srvyrynvgi taiedarkae ervlykrifp qlfsniveqg gltlllagvv lvhvtifpna
      241 lfnvgilfai kylygamqnn ivnyrvirla lpmdrdlvql eqnamnntrs datnisdsvv
      301 fdnkfallsk eagsalnayd sivssskilv pcnpimsqgl ieawfdiasd dtrrkyenfl
      361 rlfnvsreva drflhnpetl svgerqrvvl amafaqdvey lvlddvfsvl npelretvsq
      421 amlssqvhhi vlfarnpeyi pcvfygnnsk qvthsvveen hlqntcsdkt mqadcveski
      481 ptgaesrgkf irtvrelfsa sivclpiatv livlaelmfv eniatntnln mlqssalfas
      541 llivvgiial nfpvyavpiv rltklhnrli mrlhkysnid nkgdvlgrlg ddfsdlqmsi
      601 psaiahvifi ivqtvivlam tiaavpqyvy imiimvplsc liwyagslll ntaadqqaqy
      661 rdkflgalss llstrslpqg aifdssrkyh yassenkywq rmrrfiniyt vrncmmqsls
      721 lvlefsilym ltvssmnfas asavlyfvvm lssslenvie tlqdsgvltq taqrvfslen
      781 yerkqqaykr nelayqnlsk tiadsdissv aiigasgagk svllrdwfdh nntqncmlie
      841 dylfddngai vapdftsltk cigsqqrtvv mldetfksvt dadgcserei ivraircakt
      901 rnnklvvvlh aqtncdvfdk vinfdey
//
LOCUS       WP_257983776            2091 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF637 domain-containing protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_257983776
VERSION     WP_257983776.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04830.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..2091
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..2091
                     /product="DUF637 domain-containing protein"
     Region          1..19
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          21..41
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          43..62
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          64..82
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          84..103
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          106..123
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          126..144
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          147..167
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          170..189
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          191..210
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          <233..>617
                     /region_name="PRK15319"
                     /note="fibronectin-binding autotransporter adhesin ShdA"
                     /db_xref="CDD:185219"
     Region          233..253
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          255..273
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          275..294
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          296..314
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          316..340
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          342..359
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          362..383
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          385..404
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          406..426
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          448..464
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          486..504
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          506..524
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          526..545
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          566..584
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          586..604
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          606..631
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          633..650
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          653..686
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          688..704
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          705..723
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          725..743
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1133..1151
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1153..1170
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1172..1191
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1193..1213
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1215..1235
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1237..1256
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1258..1281
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1284..1299
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1289..1403
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          1301..1320
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1360..1499
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          1637..1756
                     /region_name="DUF637"
                     /note="Possible hemagglutinin (DUF637); pfam04830"
                     /db_xref="CDD:428148"
ORIGIN      
        1 galvskgaqw idaasldnaq givsgesdvt lsiagkldng qgglvsaqra lsferddtll
       61 nnaggringg slllkgasld nsdgqlisqg rldailggal vntgaarlas ggdlllrsas
      121 vdnrggklvs qglleisags ldnsasgtla sqadmslrlv ggalrnqqdg lifsqagale
      181 vqagsldnrq gtlqaqgdnr lriggaldnq ggrldsragn ldlqsgsldn gaggvlnsak
      241 gwlklvtglf dnsagvtqaq sleiragqgv rnqqghlsal ggdnrivtad fdnqggglya
      301 sgllsldgqr flnqgaaagq ggkvgagrid fslagalanr fgqlesesel hlraaaidns
      361 ggslralgrs gstrlvagdl nnaygvlesa nqdldlqlgs lanaggrilh tgngtfglds
      421 gqviraggel ttnglldira sewtnssvlq agrlnldigt frqtaegkll avqsftgrgg
      481 dwsndgllas dgslrlelsg gyrgngrats lgdfalnaas ldlgnaasla gganvtlgag
      541 nllvnrgrit aagdlvasaa slnnygtlgg ggnlrlnapa llnergllfs gadmtlragd
      601 itnlygdvys lgrldiardd agnraaslrn lsgviesgkd fslraslien rravlesksg
      661 lytakmeqta ciegvnagdc sgkrnaiwti tqrdktevta ssamgqllag gdfaidggtl
      721 nnlssligsg gnltanlevl dnqgletgel etirvlrtar ggdiggidqk srnftnlywy
      781 qsanfdpara geipaalnai lsdwsfeyef pskgptpiss gdqsyaaviq aagdvtvnas
      841 tridngvtrp gytfvgsgrq vgdsavggsg vsvvvpltsq lppdlarrqv npvtlpgfsl
      901 pqgdnglfrl ssrfaedgng saalgagadr tqggsgvsvg qqgagnaagt wqgqgvrvdg
      961 lagaanvqgq ggstlsgslp gvarvqgvpg natpsashky lietnpalte lkqflnsdyl
     1021 lsglgmnpdd skkrlgdgly eqrlirdavv artgqryidg lssdealfry lmdnaiaykd
     1081 qlhlqlgvgl saeqmaalth divwleevev ngekvlapvv ylaqaegrla pngaliqgrd
     1141 vklvsggdlh nvgtlrarnd lsatadnldn sglieagkrl dllagdsirn rqggviagrd
     1201 vsltaltgdv inersvtryd saldgrtwer sfadsaarve aanslnvqag rdianlggvl
     1261 qsrgdlslda grdvtvaave drqgqtrwnt srlqsvtqlg aevsagrdln vsagrdlsav
     1321 asalearrdi alsagrdvtl aaaaneehay sktrkvtyqe dkvaqqgtrv daggdlaina
     1381 gqdlrliasq asagdeaylv agdklellaa ndsnyylydk kkkgdfgrke trrdevtdvk
     1441 avgsqissgg dltllsggdq tyqgaklesg ndlaivsgga vtfeavkdlh qeshekskgd
     1501 lawnsakgkg qtdetlrqtq ivaqgnlaik aadglkidvk hidqktvset idvmvkadps
     1561 lawlreaekq gdvdwrkvre vhdsfkyshs glgagaalai aivvtyltwg agssmagvaa
     1621 ksatgvaans vasavatnaa istvnnrgnl gavakdvtss dslkgyavag isggfmpssl
     1681 gaqlavrsal ntvvnggkfr dnvaqaaism aadalsgaif dkvgdalvgs glpkkvavha
     1741 ivggligeaa ggdfrtaala aganealvsl vgekifpgea hervlamtsq ligmtvaaaa
     1801 ggdtkaqeka awvaqqatvy nnlnhaaaes llkeikdcra aggcgeeklq gilgkyekls
     1861 aersnaigqc asrqcvddiv dssirmddpv skellsllrq ttydtpgllq gnpdaivsqt
     1921 pnpsgwgdlf aldkqlafak nlkegwltpe etadldrwna stswldrtag rqldpkekay
     1981 llselggaaa mallggrgsv gsgaggirnt yssikeapky pqgfkdikng tqkykinnqd
     2041 vleslrgvep gkwvkvyrdg fdsagnkisv hyfqsqsgkv fdvkvksgws n
//
LOCUS       WP_257983035             149 aa            linear   BCT 02-MAR-2025
DEFINITION  BcsE family c-di-GMP-binding protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257983035
VERSION     WP_257983035.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 149)
  AUTHORS   Acheson,J.F., Ho,R., Goularte,N.F., Cegelski,L. and Zimmer,J.
  TITLE     Molecular organization of the E. coli cellulose synthase
            macrocomplex
  JOURNAL   Nat Struct Mol Biol 28 (3), 310-318 (2021)
   PUBMED   33712813
REFERENCE   2  (residues 1 to 149)
  AUTHORS   Zouhir,S., Abidi,W., Caleechurn,M. and Krasteva,P.V.
  TITLE     Structure and Multitasking of the c-di-GMP-Sensing Cellulose
            Secretion Regulator BcsE
  JOURNAL   mBio 11 (4), e01303-20 (2020)
   PUBMED   32788377
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 149)
  AUTHORS   Thongsomboon,W., Serra,D.O., Possling,A., Hadjineophytou,C.,
            Hengge,R. and Cegelski,L.
  TITLE     Phosphoethanolamine cellulose: A naturally produced chemically
            modified cellulose
  JOURNAL   Science 359 (6373), 334-338 (2018)
   PUBMED   29348238
REFERENCE   4  (residues 1 to 149)
  AUTHORS   Romling,U. and Galperin,M.Y.
  TITLE     Bacterial cellulose biosynthesis: diversity of operons, subunits,
            products, and functions
  JOURNAL   Trends Microbiol 23 (9), 545-557 (2015)
   PUBMED   26077867
REFERENCE   5  (residues 1 to 149)
  AUTHORS   Fang,X., Ahmad,I., Blanka,A., Schottkowski,M., Cimdins,A.,
            Galperin,M.Y., Romling,U. and Gomelsky,M.
  TITLE     GIL, a new c-di-GMP-binding protein domain involved in regulation
            of cellulose synthesis in enterobacteria
  JOURNAL   Mol Microbiol 93 (3), 439-452 (2014)
   PUBMED   24942809
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022448.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10995.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..149
                     /product="BcsE family c-di-GMP-binding protein"
                     /GO_function="GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
     Region          <1..148
                     /region_name="CBP_GIL"
                     /note="Cellulose biosynthesis GIL; cl17862"
                     /db_xref="CDD:473100"
ORIGIN      
        1 ceavhnvmtn tllppdskgv mvalrpapgl rveqaltlck pnrmgdimti gnnrlvlfls
       61 fcrindldta lnhifplptg difsnrmvwf edkqilseiv imrgveparw ntplplsvgk
      121 netinathdg rhwrrypeph rlttreeqa
//
LOCUS       WP_257983860             178 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: LysR substrate-binding domain-containing protein
            [Ralstonia].
ACCESSION   WP_257983860
VERSION     WP_257983860.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia
  ORGANISM  Ralstonia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
REFERENCE   1  (residues 1 to 178)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Ralstonia"
                     /db_xref="taxon:48736"
     Protein         1..178
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=19139
     Region          <2..156
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 meehidlavr igelpgsttl varrlgvqdl sigaapsyla rhgtpvafdd faqhvgiayl
       61 rdgvvsprrv rdadgverel pvkrqlsldd vqaiagagva glglvqlpcw llthyvdtgq
      121 lvtvrercgv rpmdvhavwp rtpylplktr caidalaadi prmilpragp gnglramq
//
LOCUS       WP_257983869             103 aa            linear   BCT 02-MAR-2025
DEFINITION  PEP-utilizing enzyme, partial [Klebsiella pneumoniae].
ACCESSION   WP_257983869
VERSION     WP_257983869.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 103)
  AUTHORS   Herzberg,O., Chen,C.C., Kapadia,G., McGuire,M., Carroll,L.J.,
            Noh,S.J. and Dunaway-Mariano,D.
  TITLE     Swiveling-domain mechanism for enzymatic phosphotransfer between
            remote reaction sites
  JOURNAL   Proc Natl Acad Sci U S A 93 (7), 2652-2657 (1996)
   PUBMED   8610096
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012609.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00391.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..103
                     /product="PEP-utilizing enzyme"
                     /GO_function="GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA]"
                     /GO_process="GO:0016310 - phosphorylation [Evidence IEA]"
     Region          <1..103
                     /region_name="PRK11377"
                     /note="dihydroxyacetone kinase subunit M; Provisional"
                     /db_xref="CDD:183108"
ORIGIN      
        1 yidiedilqr tlrhlqgvqe kvptpgepti iiadniypst vlqldasfvk glclrdgseq
       61 ahgaiiaraa giawlsqqge alnsvqpget ivldmrhqrl ird
//
LOCUS       WP_257983882             233 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257983882
VERSION     WP_257983882.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 233)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 233)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>233
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          3..>233
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mylgidlgts evkalviden heviashsap lsiqrphqhw seqapelwwe ateylmatlr
       61 ekcaqhwpai kaiglsgqmh gavlldaegk airpailwnd trcaaecael eamapelhqv
      121 agnlampgft apkllwvrrh epehfqrtat vllpkdylry rmtgkkvsdm sdaagtlwld
      181 vakrdwsdal ldkcglsrsq mptlvegcei satldpqvaa rwglnasvvv agg
//
LOCUS       WP_257983892             105 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257983892
VERSION     WP_257983892.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 105)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..105
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <2..92
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 meswhawcsq agleqpivpa glrlndsnlv leavrlgagv alerrslvag aiargelvql
       61 tavtvpypwh ywltvspqae nrpevarfia wleeeialwr qqisa
//
LOCUS       WP_257983905             220 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257983905
VERSION     WP_257983905.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>220
                     /product="ABC transporter substrate-binding protein"
     Region          6..>220
                     /region_name="PRK15104"
                     /note="oligopeptide ABC transporter substrate-binding
                     protein OppA; Provisional"
                     /db_xref="CDD:185059"
ORIGIN      
        1 mtlhkknhit rtllavsmla msggalaaqv ppgtqlaekq elvrnngsep asldphkves
       61 dvefniisdl feglvnvspa gviqprlaer wenkdnllwt fhlrpgltws dgtaitaqdi
      121 vwswqrlvsp ataspyasyp gnmhianare ialgqkgpet lgvkalndtt lqvtltqpna
      181 aflamlahps lvpidkvlve ryadkwtrpe hivtsgpykl
//
LOCUS       WP_257983899             202 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257983899
VERSION     WP_257983899.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 202)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..202
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..190
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 gstrplvits gtlmgddgsg aparesffns ghpsprtase lagqqlleag vdvrvvrlpq
       61 vhdtvrqgll tcyieravan gavalrgegs nrwsaahvdd varlyvsall qgaageryha
      121 vaeegialrd iaaviahgln lplthlddsq vdawfgwfap ftaldlrass awtrerlqwq
      181 pvgpglledl qnmdyhkvtl sq
//
LOCUS       WP_257983907             194 aa            linear   BCT 02-MAR-2025
DEFINITION  YitT family protein [Ralstonia mannitolilytica].
ACCESSION   WP_257983907
VERSION     WP_257983907.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia mannitolilytica
  ORGANISM  Ralstonia mannitolilytica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Ralstonia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014627.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02588.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Ralstonia mannitolilytica"
                     /db_xref="taxon:105219"
     Protein         1..194
                     /product="YitT family protein"
                     /calculated_mol_wt=20065
     Region          8..>180
                     /region_name="YitT"
                     /note="Uncharacterized membrane-anchored protein YitT,
                     contains DUF161 and DUF2179 domains [Function unknown];
                     COG1284"
                     /db_xref="CDD:440895"
ORIGIN      
        1 mledvygmav gmmfivtgvv llsaaglvtg giagiallvs yvapmsvgti ftlvnvpffv
       61 fayfvmgprf aikstlascg itlllavtrq alhidfespl faavvggtln gmgvlalarh
      121 gsgvggtgvl tlwlqrtrgi nagivqvaid smilltsllv iptgrvgwsa lsavamsamv
      181 iawhrpgryn vvvr
//
LOCUS       WP_257983921             324 aa            linear   BCT 02-MAR-2025
DEFINITION  phage capsid protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257983921
VERSION     WP_257983921.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040375.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19821.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..324
                     /product="phage capsid protein"
     Region          33..322
                     /region_name="Phage_capsid_2"
                     /note="Phage capsid protein; pfam19821"
                     /db_xref="CDD:437653"
ORIGIN      
        1 qphcadlgre tdtpqailsg vivmsfdtak nmitaafiqq fhdsfeiaaq qkdsrlqaav
       61 ydrgnitgas ftindmgtie mtqiterfgd tvwdlpdagt rnalmadygv fvpvekrdlr
      121 klladpqgpy lqltlaasnr kkddviyral lddvlrktsn tgayapvalp asqkivaggt
      181 gmtkakliaa kamfrrnecd eqngeelyit ynadmltqil sdttltsadf mavkmlqega
      241 vsgnwlgfkw layekldsat aesvttktav awcksavhfg tgeeynvdig prrdknntiq
      301 isvdasygag raaenkvvai dfva
//
LOCUS       WP_257983911             188 aa            linear   BCT 02-MAR-2025
DEFINITION  Gfo/Idh/MocA family oxidoreductase, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257983911
VERSION     WP_257983911.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 188)
  AUTHORS   Kingston,R.L., Scopes,R.K. and Baker,E.N.
  TITLE     The structure of glucose-fructose oxidoreductase from Zymomonas
            mobilis: an osmoprotective periplasmic enzyme containing
            non-dissociable NADP
  JOURNAL   Structure 4 (12), 1413-1428 (1996)
   PUBMED   8994968
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014893.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02894.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..188
                     /product="Gfo/Idh/MocA family oxidoreductase"
     Region          <37..185
                     /region_name="GFO_IDH_MocA_C"
                     /note="Oxidoreductase family, C-terminal alpha/beta
                     domain; cl21649"
                     /db_xref="CDD:451345"
ORIGIN      
        1 alatpplfva etmapqlnik rlmcsrqsfv psrapledna fvlmeydnga vgsmwtsavn
       61 sgamhsqkvr ivgekasiew wdehpnqlsy evqgeparil ergmpylspn aladdriggg
      121 hpeglfeawa nlyrryaqai datdrddraf lqdfwypdve aglhgvywve qcvksadags
      181 qwvdftlp
//
LOCUS       WP_257983926             421 aa            linear   BCT 02-MAR-2025
DEFINITION  thioesterase domain-containing protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257983926
VERSION     WP_257983926.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 421)
  AUTHORS   Schneider,A. and Marahiel,M.A.
  TITLE     Genetic evidence for a role of thioesterase domains, integrated in
            or associated with peptide synthetases, in non-ribosomal peptide
            biosynthesis in Bacillus subtilis
  JOURNAL   Arch Microbiol 169 (5), 404-410 (1998)
   PUBMED   9560421
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013166.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00975.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..421
                     /product="thioesterase domain-containing protein"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <1..421
                     /region_name="entF"
                     /note="enterobactin non-ribosomal peptide synthetase EntF;
                     PRK10252"
                     /db_xref="CDD:236668"
ORIGIN      
        1 rvmsalpdva qavshacvfn qaaatggdar qlvgylvsds glpldtaalk arlaeqlpph
       61 mvpvvlmqla elplsangkl drkalplptl ggersgrppe pgmetlvaaa fsqllgcevn
      121 didadffalg ghsllamrla aqlsrqlarq vtpgqvmvas tvgklsalla adlsdeqaqr
      181 lgldtllplr esdgptlfcf hpasgfawqf svlarylspr wsitgiqspr pqgpmasaas
      241 ldevcehhlq tllaqqphgp yylfgyslgg tlaqgiaarl rqrgeavafl glldtwppet
      301 qnwaekeang ldpevlaeid rereaflaaq qgqasgelfs aiegnyadav rllttahsak
      361 fdgkatlfva ektrqegmdp qvvwgpwvge levfsqncah vdiispqafe aigpvvreil
      421 g
//
LOCUS       WP_257983960              92 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257983960
VERSION     WP_257983960.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 92)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 92)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>92
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          5..>92
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mkdkiltidv gtgstraaiv ridgamigfa qreyeqttpr agwseqapsl wwqaacdcir
       61 evlyrypeta aqiavigacg qmhgtvlldd rg
//
LOCUS       WP_257983966             176 aa            linear   BCT 02-MAR-2025
DEFINITION  MATE family efflux transporter, partial [Klebsiella pneumoniae].
ACCESSION   WP_257983966
VERSION     WP_257983966.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01554.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>176
                     /product="MATE family efflux transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          1..>176
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 mnvtsavrqa vertswfkkr qryrvlywre isplavpill enacvllmgv lstflvswlg
       61 keamagvgla dsfnmvimsf faaidlgttv vvafslgkrd rrraraaarq slaimtlfsi
      121 llagvihafg qeiidfvagd ataqvkdlal tyleltalsy paaaialigs galrga
//
LOCUS       WP_257983971             121 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257983971
VERSION     WP_257983971.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 121)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>121
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          1..>121
                     /region_name="PRK09124"
                     /note="ubiquinone-dependent pyruvate dehydrogenase"
                     /db_xref="CDD:181661"
ORIGIN      
        1 mkqtvaayia ktleqagvkr iwgvtgdsln glsdslnrmg tidwmptrhe evaafaagae
       61 aqltgelavc agscgpgnlh linglfdchr nhvpvlaiaa hipsseigsg yfqethpqel
      121 f
//
LOCUS       WP_257983972             112 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257983972
VERSION     WP_257983972.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 112)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>112
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          1..>112
                     /region_name="PRK08155"
                     /note="acetolactate synthase large subunit; cl39075"
                     /db_xref="CDD:453955"
ORIGIN      
        1 massgttsnt mrftgaqlvv hllerqgitm vsgipggsil piydalsqst qirhilarhe
       61 qgagfiaqgm artegkpavc macsgpgatn lvtaiadarl dsiplvcitg qv
//
LOCUS       WP_257983974             408 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257983974
VERSION     WP_257983974.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 408)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..408
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
     Region          1..408
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     Site            order(79..83,91,106,108..109,156..159,162,165..166,
                     180..182,214,311,313,339,377)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143418"
     Site            order(83,180,211,214)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143418"
ORIGIN      
        1 dalrrigaal rargeevaqm itlemgkpia qargevaksa nlcdwyaehg pamlateatl
       61 vennqaviey rplgailavm pwnfpvwqvm rgavpillag nsyllkhapn vmgsarllge
      121 ifaaaglpdg vfgwvnatnd gvsqiinddr iaavtvtgsv ragkaigaqa gaalkkcvle
      181 lggsdpfivl ndadldeavk aavtgryqns gqvcaaskrf ileagiaeaf trkfvdavaa
      241 lkmgdprdeq nyvgpmarfd lrdelhqqvt atldegatll lgaekiegag nyyaptvlcn
      301 vtagmtgfrq elfgpvatlt tardadhala landsefgls atvyttdeaq aqrfarelec
      361 ggvflngyca sdarvafggv kksgfgrels hfglhefcna qtvwkdrr
//
LOCUS       WP_257983983             167 aa            linear   BCT 02-MAR-2025
DEFINITION  lyase family protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257983983
VERSION     WP_257983983.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00206.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>167
                     /product="lyase family protein"
     Region          2..>166
                     /region_name="PRK09053"
                     /note="3-carboxy-cis,cis-muconate cycloisomerase;
                     Provisional"
                     /db_xref="CDD:181627"
ORIGIN      
        1 mslltpmlrs spltdwfsda qrvqdmldfe aalaqaqaac gmvppeavgp ivaacrheai
       61 dfaalgeaav gagnlaiplv kqltaqvkar dpeaaryvhw gatsqdaidt glvlqlrgal
      121 daaetlleql laamalqadr yrdtvmpgrt wmqhalpvtf glklagt
//
LOCUS       WP_257983891              60 aa            linear   BCT 02-MAR-2025
DEFINITION  PsiF family protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257983891
VERSION     WP_257983891.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 60)
  AUTHORS   Metcalf,W.W., Steed,P.M. and Wanner,B.L.
  TITLE     Identification of phosphate starvation-inducible genes in
            Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu d1)
            transcriptional fusions
  JOURNAL   J Bacteriol 172 (6), 3191-3200 (1990)
   PUBMED   2160940
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019389.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07769.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..60
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..60
                     /product="PsiF family protein"
     Region          <1..60
                     /region_name="PRK11505"
                     /note="phosphate starvation-inducible protein PsiF"
                     /db_xref="CDD:183165"
ORIGIN      
        1 kgeerktfms qclkkettts qgkaltpqqq kmsdcskaat akslkgders tfmssclkka
//
LOCUS       WP_257983986             139 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphate acyltransferase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257983986
VERSION     WP_257983986.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013665.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01515.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>139
                     /product="phosphate acyltransferase"
                     /GO_function="GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
     Region          1..>139
                     /region_name="PTA_PTB"
                     /note="Phosphate acetyl/butaryl transferase; cl17212"
                     /db_xref="CDD:450173"
ORIGIN      
        1 miidqcrkla lraparvvfp daldvrvlka ahylqqqgla hpilvaspfa lrqfalgerl
       61 pltgvqvidp hsnlamreaf aaawqaragd kapadavdkl adplmfaaam vsagqaevci
      121 agnlsstasv lraglrlig
//
LOCUS       WP_257983994             136 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257983994
VERSION     WP_257983994.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 136)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..136
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <1..125
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 lcaaaeylrq qpapqtiagl nehrtlgylh ngqlqkwqlh dpqqgdvrfs pqtrliqddf
       61 aaiaaavqqg mgiawlpdwl vaqaladgtl qqvlapsaqv rfaihavwpe gpwlpqktra
      121 aidalreglp ltatpg
//
LOCUS       WP_257984013             141 aa            linear   BCT 02-MAR-2025
DEFINITION  alcohol dehydrogenase catalytic domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257984013
VERSION     WP_257984013.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   Taneja,B. and Mande,S.C.
  TITLE     Conserved structural features and sequence patterns in the GroES
            fold family
  JOURNAL   Protein Eng 12 (10), 815-818 (1999)
   PUBMED   10556240
REFERENCE   2  (residues 1 to 141)
  AUTHORS   Murzin,A.G.
  TITLE     Structural classification of proteins: new superfamilies
  JOURNAL   Curr Opin Struct Biol 6 (3), 386-394 (1996)
   PUBMED   8804825
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08240.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>141
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
     Region          2..>141
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
ORIGIN      
        1 mdqidnrtva tvkdidlpal aegdvrvaid wsslnykdal aitgkgkiir qfpmvpgidf
       61 agqvkesrdp rfvpgqavil tgwgvgenhw gglateacvk gdwlvalpet lsarqamiig
      121 tagftamlcv dalvsagvtp d
//
LOCUS       WP_257984014             143 aa            linear   BCT 02-MAR-2025
DEFINITION  aconitase family protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257984014
VERSION     WP_257984014.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012550.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00330.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..143
                     /product="aconitase family protein"
     Region          <1..143
                     /region_name="Aconitase"
                     /note="Aconitase catalytic domain; Aconitase catalyzes the
                     reversible isomerization of citrate and isocitrate as part
                     of the TCA cycle; cl00285"
                     /db_xref="CDD:469706"
     Site            order(24,84,87..88,106)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:153129"
ORIGIN      
        1 aymglksgip ltevaidkvf igsctnsrie dlraaaeiak grkvapgvqa lvvpgsgpvk
       61 aqaeaegldk ifieagfewr lpgcsmclam nndrlnpger castsnrnfe grqgrggrth
      121 lvspamaaaa avtghfadir nlk
//
LOCUS       WP_257984021             150 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257984021
VERSION     WP_257984021.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 150)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..150
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <2..144
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 ileggvvarp lmkpfregly assaylaeyg vpvmpadlhh hrligyrfit nnrilpliln
       61 dhgeqltvem pgqlisndid vmadgirhgl gigrlfepil qlqpdreqfi pvmedywkty
      121 ppvylyypkn agrtkrvkal idflimhaae
//
LOCUS       WP_257984045             232 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: CocE/NonD family hydrolase C-terminal non-catalytic
            domain-containing protein [Ralstonia].
ACCESSION   WP_257984045
VERSION     WP_257984045.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia
  ORGANISM  Ralstonia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020119.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08530.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Ralstonia"
                     /db_xref="taxon:48736"
     Protein         1..232
                     /product="CocE/NonD family hydrolase C-terminal
                     non-catalytic domain-containing protein"
                     /GO_function="GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=23685
     Region          93..>130
                     /region_name="COG2936"
                     /note="Predicted acyl esterase [General function
                     prediction only]"
                     /db_xref="CDD:442179"
     Region          <135..>217
                     /region_name="PepX_C"
                     /note="X-Pro dipeptidyl-peptidase C-terminal non-catalytic
                     domain; cl29957"
                     /db_xref="CDD:421957"
ORIGIN      
        1 mqmgnprvrh grmlmsallc aalslsgcgg gdgsavanst padsntttqp tqppqpaqpa
       61 avnwttrgtr atpvqpgtsi asnagakwdd ytpparyagv akqatqyitm pdgtklaayv
      121 tlpadasgka atgtfpeadv wisstaldag vsvriddvda agnvtphtdg lqtaslravd
      181 gsrsrtmngl miqpwhpftt gsvqpivpgq avmvpvevfr papsspkats ca
//
LOCUS       WP_257983996             206 aa            linear   BCT 02-MAR-2025
DEFINITION  T6SS immunity protein Tli4 family protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257983996
VERSION     WP_257983996.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 206)
  AUTHORS   Lu,D., Zheng,Y., Liao,N., Wei,L., Xu,B., Liu,X. and Liu,J.
  TITLE     The structural basis of the Tle4-Tli4 complex reveals the
            self-protection mechanism of H2-T6SS in Pseudomonas aeruginosa
  JOURNAL   Acta Crystallogr D Biol Crystallogr 70 (Pt 12), 3233-3243 (2014)
   PUBMED   25478841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037813.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18426.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..206
                     /product="T6SS immunity protein Tli4 family protein"
     Region          54..204
                     /region_name="Tli4_C"
                     /note="Tle cognate immunity protein 4 C-terminal domain;
                     pfam18426"
                     /db_xref="CDD:436493"
ORIGIN      
        1 gvsfiikmka qdsrdkkydt krkifslkyn ipekksqlla ilsglqprqd nqrpsgnqla
       61 iqygqvdasl lgqyetsiny qnskevtitl ktdnhsytgt plldkdarvv eteygetlyk
      121 gkrkvnglei sewwtkqtds yyakpaiiyn felvihqdkk egnkllelsm dytvdllhad
      181 daltenelva lwenitetik yhpsqw
//
LOCUS       WP_257984072             402 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6402 family protein [Ralstonia].
ACCESSION   WP_257984072
VERSION     WP_257984072.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia
  ORGANISM  Ralstonia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
REFERENCE   1  (residues 1 to 402)
  AUTHORS   Zhou,Q., Grundmann,F., Kaiser,M., Schiell,M., Gaudriault,S.,
            Batzer,A., Kurz,M. and Bode,H.B.
  TITLE     Structure and biosynthesis of xenoamicins from entomopathogenic
            Xenorhabdus
  JOURNAL   Chemistry 19 (49), 16772-16779 (2013)
   PUBMED   24203528
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039427.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19940.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Ralstonia"
                     /db_xref="taxon:48736"
     Protein         1..402
                     /product="DUF6402 family protein"
                     /calculated_mol_wt=46085
     Region          102..396
                     /region_name="DUF6402"
                     /note="Family of unknown function (DUF6402); pfam19940"
                     /db_xref="CDD:437772"
ORIGIN      
        1 mstsdekmhy leksilwnpw wvvskstcta vdaeefslsm nrpapplrdq ppppqkppep
       61 kraprslleg fldfkdwlnt ppppesskpa vvtsskpkvk pfdlqdipda ldrvgwpmsa
      121 klqrkwfsge lnyattdega amginqngkp fpssmvdtam fkldwilgfd rarkkydell
      181 nrdylfsraa vrvlknkfig kessanyvdp whlcgadiqr whkeyqfqli tvdsgnlkkf
      241 emflrgvawk dgtfmddlyg algafsinaa lgehqyvvdk tgwrgrliin eivvymrdvf
      301 tfhdrsgemg tqylghwnkr gfivvpiatv vgelteldws nypvalynai sdatvyypvr
      361 nkdyriwqmk nkqggdmvly sdrrsvrlnp peiiefdfsn ar
//
LOCUS       WP_257984161             455 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257984161
VERSION     WP_257984161.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17892.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>455
                     /product="cadherin-like domain-containing protein"
     Region          12..118
                     /region_name="retention_LapA"
                     /note="retention module-containing protein; NF033682"
                     /db_xref="CDD:468140"
     Region          150..245
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          248..338
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          340..430
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
ORIGIN      
        1 mdrtalvslg nqvvvigldg klrvltegqq plpgevvvts tdvgpldlnv qltqeqgskd
       61 vtddvlqiis aieqgqdpsa vdeefapaag enggsslqts ativrdgtel lastsfetig
      121 ieslglsqtq vlalndlfrs nlqtsadstd kplattpvtl daieedggsi titteellsn
      181 vddedkdtls venliidkgn gilvdngdgt wtftpqiddd tevsftfdii ddedlvvsgs
      241 anldilpind apnaendvit teedtavtid vlvndsdveg dalsiqsasv pseqgsvdiv
      301 dgklvftpae nfngeatity ivtdgdltde akvsvtvtpv ndspvavddt tsiqedtavt
      361 idvltndtdv dgdklsiesa svpkeqgtve vvdgklvftp aenfnghaei tytvtdgelt
      421 deakvtvtvn pvndvptikv davesiteda vstdt
//
LOCUS       WP_257984180             122 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Vibrio
            parahaemolyticus].
ACCESSION   WP_257984180
VERSION     WP_257984180.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 122)
  AUTHORS   Clarke,T.A., Edwards,M.J., Gates,A.J., Hall,A., White,G.F.,
            Bradley,J., Reardon,C.L., Shi,L., Beliaev,A.S., Marshall,M.J.,
            Wang,Z., Watmough,N.J., Fredrickson,J.K., Zachara,J.M., Butt,J.N.
            and Richardson,D.J.
  TITLE     Structure of a bacterial cell surface decaheme electron conduit
  JOURNAL   Proc Natl Acad Sci U S A 108 (23), 9384-9389 (2011)
   PUBMED   21606337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037016.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17963.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..>122
                     /product="Ig-like domain-containing protein"
     Region          4..95
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
ORIGIN      
        1 mnrvndaptv enaiadqels edfatytidl ndafkdsdsa lnfsvsgnsn vlvsiengia
       61 tisptadwng setltftatd pngesvsqtv dftvasvadi vadkatvved tptiinvlgn
      121 dt
//
LOCUS       WP_257984296             102 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Neobacillus cucumis].
ACCESSION   WP_257984296
VERSION     WP_257984296.1
KEYWORDS    RefSeq.
SOURCE      Neobacillus cucumis
  ORGANISM  Neobacillus cucumis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Neobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Neobacillus cucumis"
                     /db_xref="taxon:1740721"
     Protein         1..102
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=10999
     Region          <1..>72
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mvvvlarmiq asggssfial smiltnqfla lpkrnlaltl igaclslgsg igfllggfft
       61 hswgwhslfl lmsmsiftll giiwfvpsgy anqkkltqpf df
//
LOCUS       WP_257984324             502 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Neobacillus cucumis].
ACCESSION   WP_257984324
VERSION     WP_257984324.1
KEYWORDS    RefSeq.
SOURCE      Neobacillus cucumis
  ORGANISM  Neobacillus cucumis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Neobacillus.
REFERENCE   1  (residues 1 to 502)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 502)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 502)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 502)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Neobacillus cucumis"
                     /db_xref="taxon:1740721"
     Protein         1..502
                     /product="ATP-binding protein"
                     /calculated_mol_wt=55424
     Region          3..498
                     /region_name="PRK11086"
                     /note="sensory histidine kinase DcuS; Provisional"
                     /db_xref="CDD:236839"
ORIGIN      
        1 meskqieenk gklaleiskt vsfmptiing vqssnptkii qplaekvrke tgaefvvvgn
       61 idgtryshpl qsmigkkmkg gdnqkaikkg kyyiskangs lgpsirgksp ifnkkgevig
      121 vvsvgflled vhqqitknii kvilvsifal iisffgsill grnirkdtmg lepyeiavly
      181 keknavlhgv kegilsinra gfitmmnqpa kkllqikgsv rhlkvdglfp stylfevlns
      241 giplvdkein wkdktvivnc tplpdetgis gvvasfrdkt eieqmvntls evksysedlr
      301 ahtheytnkl yvlsgllqlg eyeqalamiq aetqvlqvqn silfnqikes kvqaillgkl
      361 gkasekkikf eilsesyldi lpthiklssl ivilgnlidn afeavseshh ptvkffatdi
      421 gsdiifevsd ngkginendi phlfergfts ksgdkprgfg lsnaeeavve mngmievhsn
      481 qesgtvftvy lpkqyerrae na
//
LOCUS       WP_257984358             131 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3427 domain-containing protein [Neobacillus cucumis].
ACCESSION   WP_257984358
VERSION     WP_257984358.1
KEYWORDS    RefSeq.
SOURCE      Neobacillus cucumis
  ORGANISM  Neobacillus cucumis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Neobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11907.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Neobacillus cucumis"
                     /db_xref="taxon:1740721"
     Protein         1..131
                     /product="DUF3427 domain-containing protein"
                     /calculated_mol_wt=15470
     Region          <4..117
                     /region_name="DUF3427"
                     /note="Domain of unknown function (DUF3427); pfam11907"
                     /db_xref="CDD:463392"
ORIGIN      
        1 mlangneyfl fidlhkeedv kesinykdkf inpgefqwqs vnnttqqser gkniifnkqr
       61 gvnlhlfirk yreidgktep yiyigkgnsi fferdkpitv rmelenevpa slyteitkks
      121 llslrrlffi n
//
LOCUS       WP_257984365              57 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-finger domain-containing protein [Neobacillus cucumis].
ACCESSION   WP_257984365
VERSION     WP_257984365.1
KEYWORDS    RefSeq.
SOURCE      Neobacillus cucumis
  ORGANISM  Neobacillus cucumis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Neobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10782.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..57
                     /organism="Neobacillus cucumis"
                     /db_xref="taxon:1740721"
     Protein         1..57
                     /product="zinc-finger domain-containing protein"
                     /calculated_mol_wt=6606
     Region          2..57
                     /region_name="zf-C2HCIx2C"
                     /note="Zinc-finger; pfam10782"
                     /db_xref="CDD:402422"
ORIGIN      
        1 mrkellsqve glmnqycngc flhkylkred grraahrfci tqctvgeqlq eygkkln
//
LOCUS       WP_257984375              53 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4083 family protein [Neobacillus cucumis].
ACCESSION   WP_257984375
VERSION     WP_257984375.1
KEYWORDS    RefSeq.
SOURCE      Neobacillus cucumis
  ORGANISM  Neobacillus cucumis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Neobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024710.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13314.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..53
                     /organism="Neobacillus cucumis"
                     /db_xref="taxon:1740721"
     Protein         1..53
                     /product="DUF4083 family protein"
                     /calculated_mol_wt=6044
ORIGIN      
        1 mlnigdiifq lfailvpivf ivaiiffvrs skkrkeqldr ieekldrisg nnl
//
LOCUS       WP_257984376             126 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase [Neobacillus cucumis].
ACCESSION   WP_257984376
VERSION     WP_257984376.1
KEYWORDS    RefSeq.
SOURCE      Neobacillus cucumis
  ORGANISM  Neobacillus cucumis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Neobacillus.
REFERENCE   1  (residues 1 to 126)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 126)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Neobacillus cucumis"
                     /db_xref="taxon:1740721"
     Protein         1..126
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=13720
     Region          <23..111
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
ORIGIN      
        1 mvkagyvkqi skdkldhsns hiplfsqdni gknlslvesl reiaaekqit laqlavgwil
       61 tkgediipli garrvsqlqe slisldvnls vsnvkrieqa ipekeiaggs fpnmkfrngv
      121 vskesl
//
LOCUS       WP_257984382              55 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase-like protein [Neobacillus cucumis].
ACCESSION   WP_257984382
VERSION     WP_257984382.1
KEYWORDS    RefSeq.
SOURCE      Neobacillus cucumis
  ORGANISM  Neobacillus cucumis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Neobacillus.
REFERENCE   1  (residues 1 to 55)
  AUTHORS   Izard,T.
  TITLE     Structural basis for chloramphenicol tolerance in Streptomyces
            venezuelae by chloramphenicol phosphotransferase activity
  JOURNAL   Protein Sci 10 (8), 1508-1513 (2001)
   PUBMED   11468347
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019544.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07931.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..55
                     /organism="Neobacillus cucumis"
                     /db_xref="taxon:1740721"
     Protein         1..55
                     /product="phosphotransferase-like protein"
                     /calculated_mol_wt=6168
     Region          <9..43
                     /region_name="COG3896"
                     /note="Chloramphenicol 3-O-phosphotransferase [Defense
                     mechanisms]"
                     /db_xref="CDD:443103"
ORIGIN      
        1 mldititmpg iydleidtsv lspeecanli rkkleenpin tafkrladii neety
//
LOCUS       WP_257984405             255 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 2 TIM barrel-domain containing protein
            [Neobacillus cucumis].
ACCESSION   WP_257984405
VERSION     WP_257984405.1
KEYWORDS    RefSeq.
SOURCE      Neobacillus cucumis
  ORGANISM  Neobacillus cucumis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Neobacillus.
REFERENCE   1  (residues 1 to 255)
  AUTHORS   Jacobson,R.H., Zhang,X.J., DuBose,R.F. and Matthews,B.W.
  TITLE     Three-dimensional structure of beta-galactosidase from E. coli
  JOURNAL   Nature 369 (6483), 761-766 (1994)
   PUBMED   8008071
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02836.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Neobacillus cucumis"
                     /db_xref="taxon:1740721"
     Protein         1..255
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=29210
     Region          <3..>236
                     /region_name="LacZ"
                     /note="Beta-galactosidase/beta-glucuronidase [Carbohydrate
                     transport and metabolism]; COG3250"
                     /db_xref="CDD:442481"
ORIGIN      
        1 myietkidgn ipeelllevn vgykgknfgf kqvsvfgglv kctvelselh lwepgnpely
       61 ditlslihgn rkldsidsyf girsikldgm sfkinyksif qrlvldqgfy pegvftaptd
      121 eelrndiens mglgfngarl hekvfeprfl ywadklgylv wgehanwgld ittatglerf
      181 lpewlevver dfnhpaiigw cpfnetwdid grkqnnqvlr ivysvtktvd pirpvidtsg
      241 nfhvvtdifd vhdyv
//
LOCUS       WP_257984414             133 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Neobacillus cucumis].
ACCESSION   WP_257984414
VERSION     WP_257984414.1
KEYWORDS    RefSeq.
SOURCE      Neobacillus cucumis
  ORGANISM  Neobacillus cucumis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Neobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Neobacillus cucumis"
                     /db_xref="taxon:1740721"
     Protein         1..133
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=15365
     Region          1..129
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(1..2,16,32..34)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133389"
ORIGIN      
        1 mgelaeiahm skrtidyyts igllvaersk anyriysdea lddlkfieec knlhfpldei
       61 krklemrkak nlrdsevekh vsavtqqmkq lhndlfdlip ilekldeeqk emltlnlsll
      121 rtalmkslls vtt
//
LOCUS       WP_257984499             209 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine phosphate synthase [Neobacillus cucumis].
ACCESSION   WP_257984499
VERSION     WP_257984499.1
KEYWORDS    RefSeq.
SOURCE      Neobacillus cucumis
  ORGANISM  Neobacillus cucumis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Neobacillus.
REFERENCE   1  (residues 1 to 209)
  AUTHORS   Hazra,A.B., Han,Y., Chatterjee,A., Zhang,Y., Lai,R.Y., Ealick,S.E.
            and Begley,T.P.
  TITLE     A missing enzyme in thiamin thiazole biosynthesis: identification
            of TenI as a thiazole tautomerase
  JOURNAL   J Am Chem Soc 133 (24), 9311-9319 (2011)
   PUBMED   21534620
REFERENCE   2  (residues 1 to 209)
  AUTHORS   Zhang,Y., Taylor,S.V., Chiu,H.J. and Begley,T.P.
  TITLE     Characterization of the Bacillus subtilis thiC operon involved in
            thiamine biosynthesis
  JOURNAL   J Bacteriol 179 (9), 3030-3035 (1997)
   PUBMED   9139923
REFERENCE   3  (residues 1 to 209)
  AUTHORS   Pang,A.S., Nathoo,S. and Wong,S.L.
  TITLE     Cloning and characterization of a pair of novel genes that regulate
            production of extracellular enzymes in Bacillus subtilis
  JOURNAL   J Bacteriol 173 (1), 46-54 (1991)
   PUBMED   1898926
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014622.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02581.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Neobacillus cucumis"
                     /db_xref="taxon:1740721"
     Protein         1..209
                     /product="thiamine phosphate synthase"
                     /calculated_mol_wt=22592
     Region          9..203
                     /region_name="TIM-like beta/alpha barrel domains"
                     /note="A large family of domains similar to triose
                     phosphate isomerase (TIM) which, in general, share an
                     eight beta/alpha closed barrel structure; cl21457"
                     /db_xref="CDD:473867"
     Site            order(12,14,39,41,84,107,124,126,133,135,158,162,180..183)
                     /site_type="other"
                     /note="thiamine phosphate binding site [chemical binding]"
                     /db_xref="CDD:238317"
     Site            order(39,41,43,69..70,89,107,133,135..136,162,182..183)
                     /site_type="active"
                     /db_xref="CDD:238317"
     Site            order(41,43,69..70,86,89,107,136)
                     /site_type="other"
                     /note="pyrophosphate binding site [ion binding]"
                     /db_xref="CDD:238317"
ORIGIN      
        1 mtriltnake lhiisngkmp ieqlqeilid ihpyvtsihl rekqktarel fqavellskn
       61 iplskliind rvdvafttra agvqlafhsl gpmivkkafp qlkvgcsihs ksdgekalrd
      121 gadyvlfghv fpsqskpgkt pkgikelsrv tlldipviai ggitpentkq vsqagasgia
      181 vmsgildsrd pllavkayrn alkdgdgkk
//
LOCUS       WP_257984512             414 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Neobacillus cucumis].
ACCESSION   WP_257984512
VERSION     WP_257984512.1
KEYWORDS    RefSeq.
SOURCE      Neobacillus cucumis
  ORGANISM  Neobacillus cucumis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Neobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Neobacillus cucumis"
                     /db_xref="taxon:1740721"
     Protein         1..414
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=46621
     Region          18..396
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(19..20,23..24,27,59,106..107,109..111,117,137,
                     140..141,144,230,233..234,237..239,242,270,274,325..326,
                     330,334,350,353..354,357..358,361)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mfkqirgnpr acmvvepmfi ipyslfvtya slymlelgvn eqqigiitsl glavqifssf
       61 isgfltdrmg rkrallifdm lswsvatliw avsqnfwffv aaaivnafqk vphiawtcll
      121 vedtepkqrs mvytvlqfit vvgglfapvg glmvnkmgli sgvrlmylis ffsmtsmfii
      181 rhlmthettv gikkrressn mnlkhtlfdy vktgrnllnn yplllifsiy vlfqfqltiq
      241 ntylsiylte kltlsksilg vfpaissvcm lfllifvipr freefnfhyi aigfsfmmvs
      301 cilvltaksg nmtqiifsti lssaglllst pyleatvanv meddsranvs silqvilllf
      361 ispagiiggv tykidpripf llmlgtmivs mvllsfttkl inrnedvkkk linl
//
LOCUS       WP_257984564             285 aa            linear   BCT 02-MAR-2025
DEFINITION  nuclear transport factor 2 family protein [Psychroflexus sp.
            MES1-P1E].
ACCESSION   WP_257984564
VERSION     WP_257984564.1
KEYWORDS    RefSeq.
SOURCE      Psychroflexus sp. MES1-P1E
  ORGANISM  Psychroflexus sp. MES1-P1E
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Psychroflexus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024092.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12680.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Psychroflexus sp. MES1-P1E"
                     /db_xref="taxon:2058320"
     Protein         1..285
                     /product="nuclear transport factor 2 family protein"
                     /calculated_mol_wt=32602
     Region          38..147
                     /region_name="WI12"
                     /note="Wound-induced protein WI12; cl42057"
                     /db_xref="CDD:477929"
     Region          157..282
                     /region_name="YesE"
                     /note="Ketosteroid isomerase-related protein [General
                     function prediction only]; COG3631"
                     /db_xref="CDD:442849"
ORIGIN      
        1 mknclllals ivllascndk rytqqspeie tykkvinayq nqdwenfsth yadtvmiynn
       61 ttkdkgqtlt qliennkqda smfsswtyld kdseyemvvt dkgetwvnfw glwqaklkit
      121 gqtydipahm tvqfvdgkiv kehgywdvse lvmnpfnvev idnlykafak geipkvlelm
      181 dpkvvwneae snayadgnpy igpeavlngv farigaehey fkledvklnn mfdnkvlatl
      241 rydamykngk aynaqvahlw tledgkitnf qqftdtkkla dasan
//
LOCUS       WP_257984589             381 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6268 family outer membrane beta-barrel protein [Psychroflexus
            sp. MES1-P1E].
ACCESSION   WP_257984589
VERSION     WP_257984589.1
KEYWORDS    RefSeq.
SOURCE      Psychroflexus sp. MES1-P1E
  ORGANISM  Psychroflexus sp. MES1-P1E
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Psychroflexus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039394.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19783.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Psychroflexus sp. MES1-P1E"
                     /db_xref="taxon:2058320"
     Protein         1..381
                     /product="DUF6268 family outer membrane beta-barrel
                     protein"
                     /calculated_mol_wt=43943
     Region          <214..378
                     /region_name="DUF6268"
                     /note="Domain of unknown function (DUF6268); pfam19783"
                     /db_xref="CDD:437615"
ORIGIN      
        1 mnynykifal lvffgfgmnt iqaqedeedy skyddfeled dtpvkryasp kisgmspqkf
       61 igvsfdaqmp ykyefsnvtf pqsldngfdv deenpainet grarftggfr lntnipiisk
      121 ssfvwqsgin fmdtrynire nlnsprsptl lpdgtearsl grilnedglr ninwtntfff
      181 pmnetefivf qtqmdlsgny gldefqslst irysaaaiyg rrvndyfrwg vgvsrtyrvg
      241 nlnyvpvimf dwtsenkkwg teilfparay lryninqnsl llagfdlegq syriddysvn
      301 gnsyeirrge vrpklefqtk isgyiwasvq aglrydwsyd adeldgeadf frgffgdqdf
      361 gmvnsfenpf ffnvglnfvs p
//
LOCUS       WP_257984612              82 aa            linear   BCT 02-MAR-2025
DEFINITION  HipA N-terminal domain-containing protein [Psychroflexus sp.
            MES1-P1E].
ACCESSION   WP_257984612
VERSION     WP_257984612.1
KEYWORDS    RefSeq.
SOURCE      Psychroflexus sp. MES1-P1E
  ORGANISM  Psychroflexus sp. MES1-P1E
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Psychroflexus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025041.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13657.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Psychroflexus sp. MES1-P1E"
                     /db_xref="taxon:2058320"
     Protein         1..82
                     /product="HipA N-terminal domain-containing protein"
                     /calculated_mol_wt=9097
     Region          1..>49
                     /region_name="HipA"
                     /note="Serine/threonine protein kinase HipA, toxin
                     component of the HipAB toxin-antitoxin module [Signal
                     transduction mechanisms]; COG3550"
                     /db_xref="CDD:442771"
ORIGIN      
        1 miadslpdtf ghiifqewlt areiqkvtpl eqlaylgdpg mgaieyksst cyaefisvsl
       61 iinftillfk avytptnkhi tt
//
LOCUS       WP_257984630             262 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Psychroflexus sp. MES1-P1E].
ACCESSION   WP_257984630
VERSION     WP_257984630.1
KEYWORDS    RefSeq.
SOURCE      Psychroflexus sp. MES1-P1E
  ORGANISM  Psychroflexus sp. MES1-P1E
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Psychroflexus.
REFERENCE   1  (residues 1 to 262)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 262)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Psychroflexus sp. MES1-P1E"
                     /db_xref="taxon:2058320"
     Protein         1..262
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=30445
     Region          78..244
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(98,112..113,185,187,206,241)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:271175"
     Site            order(112,206,209,232,241)
                     /site_type="active"
                     /db_xref="CDD:271175"
ORIGIN      
        1 mnnylrclah laiyykcspe llteeqindy lfhcqnlhkt psesffkhti yglraaykvl
       61 gmdkkriqlp qierqkdlpi vlnkkevrel lnapkylkhr lmlallygcg lrsyelcnll
      121 qsdvdferkm vfirkqkekt dryvplsvhl irglkkyfkt ehpikyifns qvtkggiaqa
      181 ftpvgiqwvi kesrskvntk kkftthtlrh syathlledg lnirslkell ghariettim
      241 ylhvsntgss vkfspldtlf gs
//
LOCUS       WP_257984677             522 aa            linear   BCT 02-MAR-2025
DEFINITION  ShlB/FhaC/HecB family hemolysin secretion/activation protein
            [Psychroflexus sp. MES1-P1E].
ACCESSION   WP_257984677
VERSION     WP_257984677.1
KEYWORDS    RefSeq.
SOURCE      Psychroflexus sp. MES1-P1E
  ORGANISM  Psychroflexus sp. MES1-P1E
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Psychroflexus.
REFERENCE   1  (residues 1 to 522)
  AUTHORS   Desvaux,M., Parham,N.J. and Henderson,I.R.
  TITLE     Type V protein secretion: simplicity gone awry?
  JOURNAL   Curr Issues Mol Biol 6 (2), 111-124 (2004)
   PUBMED   15119822
REFERENCE   2  (residues 1 to 522)
  AUTHORS   Walker,G., Hertle,R. and Braun,V.
  TITLE     Activation of Serratia marcescens hemolysin through a
            conformational change
  JOURNAL   Infect Immun 72 (1), 611-614 (2004)
   PUBMED   14688146
REFERENCE   3  (residues 1 to 522)
  AUTHORS   Jacob-Dubuisson,F., Locht,C. and Antoine,R.
  TITLE     Two-partner secretion in Gram-negative bacteria: a thrifty,
            specific pathway for large virulence proteins
  JOURNAL   Mol Microbiol 40 (2), 306-313 (2001)
   PUBMED   11309114
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03865.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Psychroflexus sp. MES1-P1E"
                     /db_xref="taxon:2058320"
     Protein         1..522
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /calculated_mol_wt=59110
     Region          <32..522
                     /region_name="BamA"
                     /note="Outer membrane protein assembly factor BamA [Cell
                     wall/membrane/envelope biogenesis]; COG4775"
                     /db_xref="CDD:443807"
ORIGIN      
        1 mkdsllsskq ftlnsfnaae aelklkidsl krigypflel dqkitdkkll atirlnqkid
       61 slyiginekd liyipktiki dgqkiglayq nielfqktii eelkaqglsf gksfltdlef
      121 kkghalnanl viesglkrri dkinikgyes lpknyisyft glkigsefie srlqqktekl
      181 dnipfisvkk ptevlfkkds telflylekf nsntfdgflg fgsnensdfe lngylnmvll
      241 nnlnfgerlg iiykndgsgq qtfegnielp fvfsspvslg adlrifrrds afsnssqtve
      301 lkyylnekln lkgtaeftns tslesenlds vsdienykss fygigaeflk fgprqlfgvn
      361 tfvrlnlslg nrktknntdq ykltingqhq ikinyrnkly lnlnsqilis nnllnnelfr
      421 fggvnsirgf gensllasrf avlqteyryi ldtnlyantv idvgnyenkl nninenilgy
      481 gvgiglkska gvfnliians vsnvqesnfs ntrihinfts ff
//
LOCUS       WP_257984707             134 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257984707
VERSION     WP_257984707.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>134
                     /product="ABC transporter substrate-binding protein"
     Region          30..>134
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 msislkksgm lklglslvam tvaasvqakt lvycsegspe gfnpqlftsg ttydassvpi
       61 ynrlvefktg ttevipglae kwevsadgkt ytfhlrqgvk wqdnkdfkpt rdlnaddvvf
      121 sfdrqkntnn pyhk
//
LOCUS       WP_257984711             222 aa            linear   BCT 02-MAR-2025
DEFINITION  LytTR family transcriptional regulator DNA-binding
            domain-containing protein [Psychroflexus sp. MES1-P1E].
ACCESSION   WP_257984711
VERSION     WP_257984711.1
KEYWORDS    RefSeq.
SOURCE      Psychroflexus sp. MES1-P1E
  ORGANISM  Psychroflexus sp. MES1-P1E
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Psychroflexus.
REFERENCE   1  (residues 1 to 222)
  AUTHORS   Nikolskaya,A.N. and Galperin,M.Y.
  TITLE     A novel type of conserved DNA-binding domain in the transcriptional
            regulators of the AlgR/AgrA/LytR family
  JOURNAL   Nucleic Acids Res 30 (11), 2453-2459 (2002)
   PUBMED   12034833
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04397.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Psychroflexus sp. MES1-P1E"
                     /db_xref="taxon:2058320"
     Protein         1..222
                     /product="LytTR family transcriptional regulator
                     DNA-binding domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=25606
     Region          <90..218
                     /region_name="LytT"
                     /note="DNA-binding response regulator, LytR/AlgR family
                     [Transcription, Signal transduction mechanisms]; COG3279"
                     /db_xref="CDD:442510"
ORIGIN      
        1 mtlafvvlll sqfvirvlfn inrftvvslf fwflleavfv asvwfvfevl dkdftgnlit
       61 vwfdnllgyv limlppyflc vsyihikdii knlenensth ksvekilpdi tlkdeneivk
      121 lvlktenllf iqsannyvev nflengvlsk yllrnsikkl eptfmntpii hchwsfivda
      181 nnielakkts sgynlklnqv leltipisks cisefnkftt kp
//
LOCUS       WP_257984352             185 aa            linear   BCT 02-MAR-2025
DEFINITION  replication-relaxation family protein [Neobacillus cucumis].
ACCESSION   WP_257984352
VERSION     WP_257984352.1
KEYWORDS    RefSeq.
SOURCE      Neobacillus cucumis
  ORGANISM  Neobacillus cucumis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Neobacillus.
REFERENCE   1  (residues 1 to 185)
  AUTHORS   Zou,X., Caufield,P.W., Li,Y. and Qi,F.
  TITLE     Complete nucleotide sequence and characterization of pUA140, a
            cryptic plasmid from Streptococcus mutans
  JOURNAL   Plasmid 46 (2), 77-85 (2001)
   PUBMED   11591133
  REMARK    Erratum:[Plasmid 2002 May;47(3):251. Zhou X [corrected to Zou X]]
REFERENCE   2  (residues 1 to 185)
  AUTHORS   Nunez,B. and De La Cruz,F.
  TITLE     Two atypical mobilization proteins are involved in plasmid CloDF13
            relaxation
  JOURNAL   Mol Microbiol 39 (4), 1088-1099 (2001)
   PUBMED   11251827
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025186.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13814.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Neobacillus cucumis"
                     /db_xref="taxon:1740721"
     Protein         1..185
                     /product="replication-relaxation family protein"
                     /calculated_mol_wt=22139
ORIGIN      
        1 mslkrldyld rdqlnkihrl gtirntnril qqlssyleky redystifyl nkegreyvas
       61 ekirkktnfv qhvimrnqfy iyagfpsewk nemelsdgey kvicdawfka kgkyhilevd
      121 yqqtmkenrn kiekykglyk nksmenklgh vppliwvttt elrkkklael ckgllygvyt
      181 indik
//
LOCUS       WP_257984773             181 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Klebsiella pneumoniae].
ACCESSION   WP_257984773
VERSION     WP_257984773.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02371.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..181
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=20069
     Region          <31..179
                     /region_name="COG3547"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442768"
ORIGIN      
        1 msaftretaf nsyrsypvvh tdrgghyhwp eriasldsei talssqqtvy rhlltipgvg
       61 plvasafire vdatqfssgr ellawcglvp chhgsggkqr lssvtkngnr slrtliihga
      121 ravircvkkh ddnlgqwlqk leahrgflkt tgalankptr iiwrvlsdsv dfnmnkafsm
      181 v
//
LOCUS       WP_257984779             129 aa            linear   BCT 02-MAR-2025
DEFINITION  pyruvate kinase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257984779
VERSION     WP_257984779.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 129)
  AUTHORS   Yuan,M., McNae,I.W., Chen,Y., Blackburn,E.A., Wear,M.A.,
            Michels,P.A.M., Fothergill-Gilmore,L.A., Hupp,T. and
            Walkinshaw,M.D.
  TITLE     An allostatic mechanism for M2 pyruvate kinase as an amino-acid
            sensor
  JOURNAL   Biochem J 475 (10), 1821-1837 (2018)
   PUBMED   29748232
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 129)
  AUTHORS   Munoz,M.E. and Ponce,E.
  TITLE     Pyruvate kinase: current status of regulatory and functional
            properties
  JOURNAL   Comp Biochem Physiol B Biochem Mol Biol 135 (2), 197-218 (2003)
   PUBMED   12798932
REFERENCE   3  (residues 1 to 129)
  AUTHORS   Valentini,G., Chiarelli,L.R., Fortin,R., Dolzan,M., Galizzi,A.,
            Abraham,D.J., Wang,C., Bianchi,P., Zanella,A. and Mattevi,A.
  TITLE     Structure and function of human erythrocyte pyruvate kinase.
            Molecular basis of nonspherocytic hemolytic anemia
  JOURNAL   J Biol Chem 277 (26), 23807-23814 (2002)
   PUBMED   11960989
REFERENCE   4  (residues 1 to 129)
  AUTHORS   Larsen,T.M., Benning,M.M., Wesenberg,G.E., Rayment,I. and Reed,G.H.
  TITLE     Ligand-induced domain movement in pyruvate kinase: structure of the
            enzyme from rabbit muscle with Mg2+, K+, and L-phospholactate at
            2.7 A resolution
  JOURNAL   Arch Biochem Biophys 345 (2), 199-206 (1997)
   PUBMED   9308890
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012449.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00224.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>129
                     /product="pyruvate kinase"
                     /GO_function="GO:0000287 - magnesium ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0004743 - pyruvate kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0030955 - potassium ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006096 - glycolytic process [Evidence
                     IEA]"
     Region          3..>129
                     /region_name="PRK05826"
                     /note="pyruvate kinase; Provisional"
                     /db_xref="CDD:235619"
ORIGIN      
        1 msrrlrrtki vttlgpatdr dnnlekviaa ganvvrmnfs hgtpedhqlr adkvreiaak
       61 lgrhvailgd lqgpkirvst fkegkiflnv gdkflldanl gkgegdkekv gidykglpad
      121 vvpgdilll
//
LOCUS       WP_257984844             162 aa            linear   BCT 02-MAR-2025
DEFINITION  antibiotic biosynthesis monooxygenase [Klebsiella pneumoniae].
ACCESSION   WP_257984844
VERSION     WP_257984844.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 162)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015925.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03992.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..162
                     /product="antibiotic biosynthesis monooxygenase"
                     /calculated_mol_wt=18151
     Region          15..161
                     /region_name="COG3224"
                     /note="Antibiotic biosynthesis monooxygenase (ABM)
                     superfamily enzyme [General function prediction only]"
                     /db_xref="CDD:442457"
ORIGIN      
        1 mapysvgcpt fgvqstefpg hlganvirpa agqnlwsvii rfdtlehlya wtqsetrrql
       61 vaeiapllte gdrtevrtep afwftpptvn vrqprrwkqf litllvifps tnlvpavtgm
      121 llpslkgsll lhlindacvv alvvwfwmpi vtrlfagwlk kn
//
LOCUS       WP_257984701              97 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP cone domain-containing protein, partial [Psychroflexus sp.
            MES1-P1E].
ACCESSION   WP_257984701
VERSION     WP_257984701.1
KEYWORDS    RefSeq.
SOURCE      Psychroflexus sp. MES1-P1E
  ORGANISM  Psychroflexus sp. MES1-P1E
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Psychroflexus.
REFERENCE   1  (residues 1 to 97)
  AUTHORS   Aravind,L., Wolf,Y.I. and Koonin,E.V.
  TITLE     The ATP-cone: an evolutionarily mobile, ATP-binding regulatory
            domain
  JOURNAL   J Mol Microbiol Biotechnol 2 (2), 191-194 (2000)
   PUBMED   10939243
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03477.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Psychroflexus sp. MES1-P1E"
                     /db_xref="taxon:2058320"
     Protein         1..>97
                     /product="ATP cone domain-containing protein"
     Region          7..>57
                     /region_name="ATP-cone"
                     /note="ATP cone domain; pfam03477"
                     /db_xref="CDD:397513"
ORIGIN      
        1 mkdksfkiik ssgekadfsl sklrrslfss gadeltvdni lnvvrdelyq cistkeiynr
       61 afallkksks iyaskyklkk aiyelrptgf pfekfid
//
LOCUS       WP_257984863             139 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein, partial [Shewanella sp. 11B5].
ACCESSION   WP_257984863
VERSION     WP_257984863.1
KEYWORDS    RefSeq.
SOURCE      Shewanella sp. 11B5
  ORGANISM  Shewanella sp. 11B5
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Shewanellaceae; Shewanella.
REFERENCE   1  (residues 1 to 139)
  AUTHORS   Aravind,L., Leipe,D.D. and Koonin,E.V.
  TITLE     Toprim--a conserved catalytic domain in type IA and II
            topoisomerases, DnaG-type primases, OLD family nucleases and RecR
            proteins
  JOURNAL   Nucleic Acids Res 26 (18), 4205-4213 (1998)
   PUBMED   9722641
REFERENCE   2  (residues 1 to 139)
  AUTHORS   Szafranski,P., Smith,C.L. and Cantor,C.R.
  TITLE     Cloning and analysis of the dnaG gene encoding Pseudomonas putida
            DNA primase
  JOURNAL   Biochim Biophys Acta 1352 (3), 243-248 (1997)
   PUBMED   9224947
REFERENCE   3  (residues 1 to 139)
  AUTHORS   Bergerat,A., de Massy,B., Gadelle,D., Varoutas,P.C., Nicolas,A. and
            Forterre,P.
  TITLE     An atypical topoisomerase II from Archaea with implications for
            meiotic recombination
  JOURNAL   Nature 386 (6623), 414-417 (1997)
   PUBMED   9121560
REFERENCE   4  (residues 1 to 139)
  AUTHORS   Versalovic,J. and Lupski,J.R.
  TITLE     The Haemophilus influenzae dnaG sequence and conserved bacterial
            primase motifs
  JOURNAL   Gene 136 (1-2), 281-286 (1993)
   PUBMED   8294018
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013878.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01751.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Shewanella sp. 11B5"
                     /db_xref="taxon:2058298"
     Protein         1..>139
                     /product="toprim domain-containing protein"
     Region          2..>139
                     /region_name="PRK07561"
                     /note="DNA topoisomerase I subunit omega; Validated"
                     /db_xref="CDD:236048"
ORIGIN      
        1 mgkslvives pakaktinky lgkdfivkss vghirdlpts stsdgttvtk taaevkklsp
       61 eekakyklir dkqalvarmg vnpdkgwaak yqilpgkekv vkelkalaet adqiylatdl
      121 dregeaiawh lqeiiggdp
//
LOCUS       WP_257984872              97 aa            linear   BCT 02-MAR-2025
DEFINITION  S4 domain-containing protein, partial [Shewanella sp. 11B5].
ACCESSION   WP_257984872
VERSION     WP_257984872.1
KEYWORDS    RefSeq.
SOURCE      Shewanella sp. 11B5
  ORGANISM  Shewanella sp. 11B5
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Shewanellaceae; Shewanella.
REFERENCE   1  (residues 1 to 97)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Novel predicted RNA-binding domains associated with the translation
            machinery
  JOURNAL   J Mol Evol 48 (3), 291-302 (1999)
   PUBMED   10093218
REFERENCE   2  (residues 1 to 97)
  AUTHORS   Davies,C., Gerstner,R.B., Draper,D.E., Ramakrishnan,V. and
            White,S.W.
  TITLE     The crystal structure of ribosomal protein S4 reveals a two-domain
            molecule with an extensive RNA-binding surface: one domain shows
            structural homology to the ETS DNA-binding motif
  JOURNAL   EMBO J 17 (16), 4545-4558 (1998)
   PUBMED   9707415
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013633.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01479.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Shewanella sp. 11B5"
                     /db_xref="taxon:2058298"
     Protein         1..>97
                     /product="S4 domain-containing protein"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
     Region          1..>97
                     /region_name="PRK10475"
                     /note="23S rRNA pseudouridine(2604) synthase RluF"
                     /db_xref="CDD:236698"
ORIGIN      
        1 msesatrlnk yisesgicsr readryieqg nvfingkrak igdsvefgdk vkvnghdiap
       61 rdeadlvfia lnkpvgivst tenterdniv dfvnhse
//
LOCUS       WP_257984890             413 aa            linear   BCT 02-MAR-2025
DEFINITION  malic enzyme-like NAD(P)-binding protein, partial [Shewanella sp.
            11B5].
ACCESSION   WP_257984890
VERSION     WP_257984890.1
KEYWORDS    RefSeq.
SOURCE      Shewanella sp. 11B5
  ORGANISM  Shewanella sp. 11B5
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Shewanellaceae; Shewanella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015882.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03949.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Shewanella sp. 11B5"
                     /db_xref="taxon:2058298"
     Protein         <1..413
                     /product="malic enzyme-like NAD(P)-binding protein"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
     Region          1..>403
                     /region_name="PRK07232"
                     /note="bifunctional malic enzyme
                     oxidoreductase/phosphotransacetylase; Reviewed"
                     /db_xref="CDD:235976"
ORIGIN      
        1 dirqqaldyh efpvpgktav cltkpaqssh dlalayspgv aepvreiasn penayrytnk
       61 gntvavitng tailglgnlg plaskpvmeg ksllfkrfan idsidievkh rttedfintv
      121 esiadtfggi nledikapec feieqelikr cnipvfhddq hgtaivtaag mlnaleiqgk
      181 kiddaifvcl gagaaaiacm tmivkcgalr envymldrqg vihtrredln eykalfannt
      241 dkrtlqdvik dadvflglsg adllaaddia lmapnpvifa csnpdpeikp elahnirkdl
      301 imgtgrsdyp nqvnnvlcfp fifrgaldvr aavindemkl aavyaianla kepvpaevla
      361 aypnvsslsf gpqyvlpkpm dprllplvar avsqaaidsg vakittlpte ykv
//
LOCUS       WP_257984884             337 aa            linear   BCT 02-MAR-2025
DEFINITION  CNNM domain-containing protein, partial [Shewanella sp. 11B5].
ACCESSION   WP_257984884
VERSION     WP_257984884.1
KEYWORDS    RefSeq.
SOURCE      Shewanella sp. 11B5
  ORGANISM  Shewanella sp. 11B5
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Shewanellaceae; Shewanella.
REFERENCE   1  (residues 1 to 337)
  AUTHORS   Chen,Y.S., Kozlov,G., Moeller,B.E., Rohaim,A., Fakih,R., Roux,B.,
            Burke,J.E. and Gehring,K.
  TITLE     Crystal structure of an archaeal CorB magnesium transporter
  JOURNAL   Nat Commun 12 (1), 4028 (2021)
   PUBMED   34188059
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 337)
  AUTHORS   Gimenez-Mascarell,P., Oyenarte,I., Hardy,S., Breiderhoff,T.,
            Stuiver,M., Kostantin,E., Diercks,T., Pey,A.L., Ereno-Orbea,J.,
            Martinez-Chantar,M.L., Khalaf-Nazzal,R., Claverie-Martin,F.,
            Muller,D., Tremblay,M.L. and Martinez-Cruz,L.A.
  TITLE     Structural Basis of the Oncogenic Interaction of Phosphatase PRL-1
            with the Magnesium Transporter CNNM2
  JOURNAL   J Biol Chem 292 (3), 786-801 (2017)
   PUBMED   27899452
REFERENCE   3  (residues 1 to 337)
  AUTHORS   Gulerez,I., Funato,Y., Wu,H., Yang,M., Kozlov,G., Miki,H. and
            Gehring,K.
  TITLE     Phosphocysteine in the PRL-CNNM pathway mediates magnesium
            homeostasis
  JOURNAL   EMBO Rep 17 (12), 1890-1900 (2016)
   PUBMED   27856537
REFERENCE   4  (residues 1 to 337)
  AUTHORS   de Baaij,J.H., Stuiver,M., Meij,I.C., Lainez,S., Kopplin,K.,
            Venselaar,H., Muller,D., Bindels,R.J. and Hoenderop,J.G.
  TITLE     Membrane topology and intracellular processing of cyclin M2 (CNNM2)
  JOURNAL   J Biol Chem 287 (17), 13644-13655 (2012)
   PUBMED   22399287
REFERENCE   5  (residues 1 to 337)
  AUTHORS   Yang,M., Jensen,L.T., Gardner,A.J. and Culotta,V.C.
  TITLE     Manganese toxicity and Saccharomyces cerevisiae Mam3p, a member of
            the ACDP (ancient conserved domain protein) family
  JOURNAL   Biochem J 386 (Pt 3), 479-487 (2005)
   PUBMED   15498024
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013741.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01595.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Shewanella sp. 11B5"
                     /db_xref="taxon:2058298"
     Protein         1..>337
                     /product="CNNM domain-containing protein"
     Region          1..>321
                     /region_name="TlyC"
                     /note="Hemolysin-related protein, contains CBS domains,
                     UPF0053 family [General function prediction only];
                     COG1253"
                     /db_xref="CDD:440865"
ORIGIN      
        1 mltlllivsf ailisflcsi feavllsvtp syiatlketn pfiaaqldkq kqnidsplvs
       61 iltlntisht mgasvagaqa aivfgshmlg vfsavltfli lflseiipkt lganhwrkla
      121 psvsvclfwm ekitmpliwm sqkvtnllgk gnngqyirqe lsamskmgkd sgelseqesq
      181 iltqmlsmkd mhvsdimtpr tvifklsthi thaqftdqyl sspftrfpiy qgdrdnvigy
      241 vnrndiilqs rqtpdteigt hlktllavps svrvlplfql mikrnakmal vvdeygsseg
      301 ivtiediiet ligleivdsk dlapnmqala rklwqrr
//
LOCUS       WP_257984943              37 aa            linear   BCT 02-MAR-2025
DEFINITION  HisA/HisF-related TIM barrel protein, partial [Shewanella sp.
            11B5].
ACCESSION   WP_257984943
VERSION     WP_257984943.1
KEYWORDS    RefSeq.
SOURCE      Shewanella sp. 11B5
  ORGANISM  Shewanella sp. 11B5
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Shewanellaceae; Shewanella.
REFERENCE   1  (residues 1 to 37)
  AUTHORS   Copley,R.R. and Bork,P.
  TITLE     Homology among (betaalpha)(8) barrels: implications for the
            evolution of metabolic pathways
  JOURNAL   J Mol Biol 303 (4), 627-641 (2000)
   PUBMED   11054297
REFERENCE   2  (residues 1 to 37)
  AUTHORS   Fani,R., Tamburini,E., Mori,E., Lazcano,A., Lio,P., Barberio,C.,
            Casalone,E., Cavalieri,D., Perito,B. and Polsinelli,M.
  TITLE     Paralogous histidine biosynthetic genes: evolutionary analysis of
            the Saccharomyces cerevisiae HIS6 and HIS7 genes
  JOURNAL   Gene 197 (1-2), 9-17 (1997)
   PUBMED   9332345
REFERENCE   3  (residues 1 to 37)
  AUTHORS   Fani,R., Lio,P., Chiarelli,I. and Bazzicalupo,M.
  TITLE     The evolution of the histidine biosynthetic genes in prokaryotes: a
            common ancestor for the hisA and hisF genes
  JOURNAL   J Mol Evol 38 (5), 489-495 (1994)
   PUBMED   8028028
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013168.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00977.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..37
                     /organism="Shewanella sp. 11B5"
                     /db_xref="taxon:2058298"
     Protein         1..>37
                     /product="HisA/HisF-related TIM barrel protein"
                     /GO_process="GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
     Region          1..>37
                     /region_name="TIM-like beta/alpha barrel domains"
                     /note="A large family of domains similar to triose
                     phosphate isomerase (TIM) which, in general, share an
                     eight beta/alpha closed barrel structure; cl21457"
                     /db_xref="CDD:473867"
ORIGIN      
        1 miipaidlid gqvvrlyqgd ydkqttfdls plaqlqs
//
LOCUS       WP_257984949             297 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein, partial
            [Shewanella sp. 11B5].
ACCESSION   WP_257984949
VERSION     WP_257984949.1
KEYWORDS    RefSeq.
SOURCE      Shewanella sp. 11B5
  ORGANISM  Shewanella sp. 11B5
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Shewanellaceae; Shewanella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Shewanella sp. 11B5"
                     /db_xref="taxon:2058298"
     Protein         1..>297
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          1..>297
                     /region_name="PRK11160"
                     /note="cysteine/glutathione ABC transporter
                     membrane/ATP-binding component; Reviewed"
                     /db_xref="CDD:236865"
ORIGIN      
        1 mqvlrpfval frrqwlmmlv gllltfttll tgigllslsg wflsasavag lavvtaqtfn
       61 fftpaggvrf fsiartasry gerlatheat fklltqlrvw awnkllplsa anlqglrrgd
      121 llnrlvadid tldhlylrll tpmaaslmmi gvllvflgwf dnhlalslca lllaawfilp
      181 lvfyylgksp gqalmqaqrq yrvelldviq gqaelslfga nkrylaqleq aqralfsqqt
      241 tmanitglsq allilingca vvfmlylagq svgdasppgp lmalmvfatm aslemmm
//
LOCUS       WP_257984962             193 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial [Shewanella
            sp. 11B5].
ACCESSION   WP_257984962
VERSION     WP_257984962.1
KEYWORDS    RefSeq.
SOURCE      Shewanella sp. 11B5
  ORGANISM  Shewanella sp. 11B5
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Shewanellaceae; Shewanella.
REFERENCE   1  (residues 1 to 193)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 193)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 193)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 193)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Shewanella sp. 11B5"
                     /db_xref="taxon:2058298"
     Protein         1..>193
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          19..193
                     /region_name="YnjD"
                     /note="ABC-type uncharacterized transport system YnjBCD,
                     ATPase component [General function prediction only];
                     COG4136"
                     /db_xref="CDD:443311"
ORIGIN      
        1 mqtfastang snttstselt idglilsrqq qhllslsati rggeiltimg psgsgkstll
       61 nwltgmlpag fsaegqlhln gqnitttash lrhigllyqd pllfphlsva gnigfampps
      121 pkvqrqaais ealtqvglgg leqrnpqsls ggqqarvall rvllsqpkai lldepfskld
      181 sqlrqetrql vfd
//
LOCUS       WP_257985008             982 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Bacillus sp. T33-2].
ACCESSION   WP_257985008
VERSION     WP_257985008.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. T33-2
  ORGANISM  Bacillus sp. T33-2
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 982)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 982)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 982)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 982)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..982
                     /organism="Bacillus sp. T33-2"
                     /db_xref="taxon:2054168"
     Protein         1..982
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=111901
     Region          <98..>153
                     /region_name="CBM6-CBM35-CBM36_like"
                     /note="Carbohydrate Binding Module 6 (CBM6) and CBM35_like
                     superfamily; cl14880"
                     /db_xref="CDD:449372"
     Region          244..398
                     /region_name="CBM6-CBM35-CBM36_like"
                     /note="Carbohydrate Binding Module 6 (CBM6) and CBM35_like
                     superfamily; cl14880"
                     /db_xref="CDD:449372"
     Region          543..866
                     /region_name="UgpB"
                     /note="ABC-type glycerol-3-phosphate transport system,
                     periplasmic component [Carbohydrate transport and
                     metabolism]; COG1653"
                     /db_xref="CDD:441259"
ORIGIN      
        1 mkskiliwsv itlffifpqg fasaennsdk vpaekiveer yhsvlqkwek egvkdasnie
       61 vsvpssdsis tdqqnllpds eskgygdsvf ywhnqesisy evnvpeegly elsfdyypls
      121 nkvipiegai lvngefpfye srrivfpsew kneqdvfekd rfgndvipqq ttvnkwsrak
      181 aedasqlqpa plkyflkqgk ntielsnlrg emlvgklsvt svsellayee yievnkghkq
      241 vkelivneae tnytknssyi rpfastdpsa vpsdpkylll ntvggdswat sgqevnwnik
      301 vdkdgfyqlt fkvqqnkktg apvfrkvsid geipfsevas ytfefnkkws nvtlsndkge
      361 pylfyltkge htigleadas piervayttn evmkeieels lsikkltgnq tnqsrgwkis
      421 eyipdiedrv nqwaktleee skylkglgdp ekdsseivsl qlavqklkkl sekpdeipnr
      481 mtelsegsss vaqllgnllv elpkqpllvd rfylhgeqel paaaigflek twnglerfal
      541 sftsgnytvd nrddetievw mnrprqyveq iqnladrtft petgipvkfs lmpdesklvl
      601 ssaankqpdv algisnwlpy elsirgaavd lhqfedfeay skqfspgafl plmiedsvya
      661 lpetqdffvq fyrrdildam nlpvpdtwdd visilpelqr fgmnyytpis gaagfkpfqt
      721 tapfiyqfqg dlyekdgmrt aigseealeg iqfmadlnti yslplqvpnf ynhfryatmp
      781 igvssfttyv qltsaapeia gwwditpqpg nkqedgtver watgsgqsam ifkgtkdkek
      841 swellkwwmd tetqtefass lqtlygpeym wntanleafn qlpwpeehke tilkqweylq
      901 evpktpgaym verelsniwn rivfdgentr savddsiiai dreitrkmee fgymkngkmv
      961 kpypiptieq vkswageend kk
//
LOCUS       WP_257985061             291 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Bacillus sp. T33-2].
ACCESSION   WP_257985061
VERSION     WP_257985061.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. T33-2
  ORGANISM  Bacillus sp. T33-2
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 291)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 291)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 291)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 291)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Bacillus sp. T33-2"
                     /db_xref="taxon:2054168"
     Protein         1..291
                     /product="ATP-binding protein"
                     /calculated_mol_wt=32515
     Region          <19..291
                     /region_name="KinE"
                     /note="Sporulation sensor histidine kinase E [Cell cycle
                     control, cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG5809"
                     /db_xref="CDD:444511"
ORIGIN      
        1 mlnslgvdee llnekydtlr segqlngemv vcvsgdrkkh fefstkhnia dglnltvfkn
       61 iteklemeeq lrksdtlnil gqlaagiahe irnpmtalkg fiqllsnnmg kenpmyfhvi
      121 stelqridsi ineflimakp qalkfietdi skimketadf ltaqavlhnv qfrtcfepdl
      181 psvrcepnql kkvfiniikn aievmskggf vtisinktdd grihiaiqde gsgipedkvk
      241 rlgepfyttk ehgtglglmv sfkiieehng kievesgvgi gtvfhvflpl k
//
LOCUS       WP_257985088             324 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF294 nucleotidyltransferase-like domain-containing protein
            [Bacillus sp. T33-2].
ACCESSION   WP_257985088
VERSION     WP_257985088.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. T33-2
  ORGANISM  Bacillus sp. T33-2
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015410.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03445.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Bacillus sp. T33-2"
                     /db_xref="taxon:2054168"
     Protein         1..324
                     /product="DUF294 nucleotidyltransferase-like
                     domain-containing protein"
                     /GO_function="GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA]"
                     /calculated_mol_wt=37206
     Region          31..139
                     /region_name="DUF294"
                     /note="Putative nucleotidyltransferase DUF294; pfam03445"
                     /db_xref="CDD:460919"
     Region          182..318
                     /region_name="DUF294_C"
                     /note="Putative nucleotidyltransferase substrate binding
                     domain; pfam10335"
                     /db_xref="CDD:463050"
ORIGIN      
        1 mmscntysei rmlrdhymnn gklnhvelnk fhdhimhqvv slsvariskk lgaspslfsf
       61 fvmgsagrfe qavwsdqdhg ivyedngeda qeyfltlgke iseglsqagy afcdggvmas
      121 nplwcrsrtt wkqqlddwvs etswesirhl lifidgrpiy gegsyidelk rlvyksvrne
      181 nmlhrlldnt mhvkkgvgfl gqllvethgk ytgslnikek avlpyvnaar llalkgdile
      241 nstllrlkhl pekimavrdr slyeqqflrl meyrlsmgnh kdydsghyla vdsltkeqkd
      301 vlkeiiknaa hlyqlarrqi ekdd
//
LOCUS       WP_257985132             414 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Bacillus sp. T33-2].
ACCESSION   WP_257985132
VERSION     WP_257985132.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. T33-2
  ORGANISM  Bacillus sp. T33-2
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Bacillus sp. T33-2"
                     /db_xref="taxon:2054168"
     Protein         1..414
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=46192
     Region          64..>381
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mkskssyvhk imtlglagsi llsgcssnee sekaaatnke ektlriltnv vggkdpeehq
       61 kfeeeierlt gikvemekpp adydqkllas mssgekfdlv yltkpmldvl veqgvltdlt
      121 kqvekskils dsdvipeeew dlvrteddki ygvfnkfegg tlptvrqdwm dklgleapdt
      181 ldgfyevlka fkekdpdgng kndtyglsta glydiqgfms aegvkyryvi edgkrtipya
      241 teaavpvyew faklykdgil dpnfatndsg kmrelfltdr vgmvtywdaw vglfnnikqt
      301 edpqttfeak giagaespdg kkmlrrgdps lwavpvnaeq pdtameflef whseegnilg
      361 tlgikdhdyt vnngkyelte tgkehgmdhg apfpnntkfe npigtypgak eaqh
//
LOCUS       WP_257985133             278 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Bacillus sp. T33-2].
ACCESSION   WP_257985133
VERSION     WP_257985133.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. T33-2
  ORGANISM  Bacillus sp. T33-2
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02371.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Bacillus sp. T33-2"
                     /db_xref="taxon:2054168"
     Protein         1..278
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=31208
     Region          <75..275
                     /region_name="COG3547"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442768"
ORIGIN      
        1 meahrsgpir knwsknsdkn gfkvdfplid mfidhdqvln kykirkpely dlgfshnncn
       61 grcvkagmah fkrlkerarq hnriqkvleg aniklgsvvs dvlgvsardm ldaiadgeed
      121 peklanfarr tmkkkkeele lalkgyinsh qrlllktilg hidflteqie mlnqevakrv
      181 sshqedieil dsipgiatrm aeqilseigt dvkkqfptas hmcswaglvp gqnesagkrk
      241 saktkkgnky lrsalteaah svrgsknylg alyrrtas
//
LOCUS       WP_257985150             159 aa            linear   BCT 02-MAR-2025
DEFINITION  redoxin domain-containing protein [Bacillus sp. T33-2].
ACCESSION   WP_257985150
VERSION     WP_257985150.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. T33-2
  ORGANISM  Bacillus sp. T33-2
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 159)
  AUTHORS   Chae,H.Z., Robison,K., Poole,L.B., Church,G., Storz,G. and
            Rhee,S.G.
  TITLE     Cloning and sequencing of thiol-specific antioxidant from mammalian
            brain: alkyl hydroperoxide reductase and thiol-specific antioxidant
            define a large family of antioxidant enzymes
  JOURNAL   Proc Natl Acad Sci U S A 91 (15), 7017-7021 (1994)
   PUBMED   8041738
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012787.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00578.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Bacillus sp. T33-2"
                     /db_xref="taxon:2054168"
     Protein         1..159
                     /product="redoxin domain-containing protein"
                     /GO_function="GO:0016209 - antioxidant activity [Evidence
                     IEA]"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=17483
     Region          4..159
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
     Site            order(62,65)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239264"
ORIGIN      
        1 mtivivqamg kddtlvassn aklveigasa pnftlsdlsg kavdlsdykg rkvmlnfwat
       61 wcgpckaemp amqelytkmn geieilavnm dpkndvagyv aehgltfpvl ldeseqvska
      121 ysifsiptsf fideqgiirq khngsmtleq meeyvhklk
//
LOCUS       WP_257985249              90 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome P460 family protein [Shewanella sp. GutCb].
ACCESSION   WP_257985249
VERSION     WP_257985249.1
KEYWORDS    RefSeq.
SOURCE      Shewanella sp. GutCb
  ORGANISM  Shewanella sp. GutCb
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Shewanellaceae; Shewanella.
REFERENCE   1  (residues 1 to 90)
  AUTHORS   Pearson,A.R., Elmore,B.O., Yang,C., Ferrara,J.D., Hooper,A.B. and
            Wilmot,C.M.
  TITLE     The crystal structure of cytochrome P460 of Nitrosomonas europaea
            reveals a novel cytochrome fold and heme-protein cross-link
  JOURNAL   Biochemistry 46 (28), 8340-8349 (2007)
   PUBMED   17583915
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028004.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16694.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Shewanella sp. GutCb"
                     /db_xref="taxon:2058315"
     Protein         1..90
                     /product="cytochrome P460 family protein"
                     /calculated_mol_wt=10138
     Region          <5..87
                     /region_name="cyt_P460_fam"
                     /note="Cytochrome P460 family; cl40447"
                     /db_xref="CDD:424078"
ORIGIN      
        1 msnagsyttg agvsyatkdv kqwfvmikdv kgrfadnplw gdgwgwalyk pedkdknlat
       61 nyktdclsch kpvehkdwiy teayptlske
//
LOCUS       WP_257985262              90 aa            linear   BCT 02-MAR-2025
DEFINITION  SLC13 family permease [Bacillus sp. T33-2].
ACCESSION   WP_257985262
VERSION     WP_257985262.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. T33-2
  ORGANISM  Bacillus sp. T33-2
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015557.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03600.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Bacillus sp. T33-2"
                     /db_xref="taxon:2054168"
     Protein         1..90
                     /product="SLC13 family permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=9952
     Region          22..>72
                     /region_name="ArsB"
                     /note="Na+/H+ antiporter NhaD or related arsenite permease
                     [Inorganic ion transport and metabolism]; COG1055"
                     /db_xref="CDD:440675"
ORIGIN      
        1 msqsfialsi liivyaiiis ekihrtiial vggilmiclg vlnqeealhh idfntlgfli
       61 gmmvfildrw gieidntshs ldeciafcfc
//
LOCUS       WP_257985287             725 aa            linear   BCT 02-MAR-2025
DEFINITION  cation:dicarboxylate symporter family transporter [Shewanella sp.
            GutCb].
ACCESSION   WP_257985287
VERSION     WP_257985287.1
KEYWORDS    RefSeq.
SOURCE      Shewanella sp. GutCb
  ORGANISM  Shewanella sp. GutCb
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Shewanellaceae; Shewanella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012593.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00375.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Shewanella sp. GutCb"
                     /db_xref="taxon:2058315"
     Protein         1..725
                     /product="cation:dicarboxylate symporter family
                     transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /calculated_mol_wt=79307
     Region          14..367
                     /region_name="SDF"
                     /note="Sodium:dicarboxylate symporter family; cl00573"
                     /db_xref="CDD:444986"
     Region          483..701
                     /region_name="PBP2_peptides_like"
                     /note="Peptide-binding protein and related homologs; type
                     2 periplasmic binding protein fold; cd13530"
                     /db_xref="CDD:270248"
ORIGIN      
        1 mgsvlkkila mtsstqmlva mflgfgvglf fgesvswmgt igtsvillmq mtvlpyivvs
       61 lvggigklqk ntaklifsra glimillwgl glltvalmpl sfpvvesaaf fstssiepvt
      121 pinyfklyip snpfesmagg yvpamvvfsi amglaligmq genkqqiltf mhtsseifsr
      181 itqglvkvlp igifamsasa agtmgvdefa smqvylisyf vlcllltfwi lpwivasltp
      241 itfaqalrvs kaslvtafat gnifivipvi veeckqlmre hdklsedgat lieilvpiaf
      301 tfpnigkltv ilfvlfagwf ngtpvdissi pslsisglls lfgsvyvaip fmldlvhlps
      361 dlfqlfvmsg fitgkfnsia avmnlfaltl ltaalfekhl tlrptqllkm glgigislil
      421 tlvvcrvgmg lfihspetts gvianmqvad kvptkvskqf pvigttprsp iagikeirsr
      481 gilrvgyips nvpfsyynnt gnlvgfdtam atklaedlnv kvefipfkks klaqaldagf
      541 fdiamsglam dieqmdalsy snpvlelnla latkdhlvnt fkstekilel davtiayveh
      601 sdvvedarlk apnikfvkid gykdffrqkk dkydavvisa qagsawtlff pgygialles
      661 ksrypvayav aqsnqsllny vnnwqrlrkv dghqdeiyny wmlgqgavek lprwsiirdv
      721 lhwve
//
LOCUS       WP_257985334             133 aa            linear   BCT 02-MAR-2025
DEFINITION  site-specific integrase [Bacillus sp. V5-8f].
ACCESSION   WP_257985334
VERSION     WP_257985334.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. V5-8f
  ORGANISM  Bacillus sp. V5-8f
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 133)
  AUTHORS   Subramanya,H.S., Arciszewska,L.K., Baker,R.A., Bird,L.E.,
            Sherratt,D.J. and Wigley,D.B.
  TITLE     Crystal structure of the site-specific recombinase, XerD
  JOURNAL   EMBO J 16 (17), 5178-5187 (1997)
   PUBMED   9311978
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014898.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02899.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Bacillus sp. V5-8f"
                     /db_xref="taxon:2053044"
     Protein         1..133
                     /product="site-specific integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=15476
     Region          3..>123
                     /region_name="XerD"
                     /note="Site-specific recombinase XerD [Replication,
                     recombination and repair]; COG4974"
                     /db_xref="CDD:443999"
ORIGIN      
        1 mdnlaqvfqq wifeegkspk tiesyvgdik gyqrfleeka vsdqqplsrf sfvrykqhll
       61 drqfaiatin kkinslkvln dflqkegivs esyiqlkrdr vqnaagsehf vtalseeevd
      121 rflfypisqf fsk
//
LOCUS       WP_257985369             355 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Bacillus sp. V5-8f].
ACCESSION   WP_257985369
VERSION     WP_257985369.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. V5-8f
  ORGANISM  Bacillus sp. V5-8f
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 355)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Bacillus sp. V5-8f"
                     /db_xref="taxon:2053044"
     Protein         1..355
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=40246
     Region          28..339
                     /region_name="PHA_synth_III_C"
                     /note="poly(R)-hydroxyalkanoic acid synthase, class III,
                     PhaC subunit; TIGR01836"
                     /db_xref="CDD:130895"
ORIGIN      
        1 matntltnsm lptfdiekev erwnvfsnia nqpepsvdht prhvvwkknk avlwhypave
       61 kkydipvffv yslfnrpnil dfspgssvie glvksgydvy lldwgiagye dkeiniedyi
      121 vdyirngvrr alrhsranev svvgyclggt laamyaaiae epiknlvvat vpidfgvaam
      181 pekwaegmqe gafnidrlid vyglipphyi eamfrsvtsp vyfspyvtll nratdkrfve
      241 kwrrmnkwtk ehvpftgeaf rqltndlfke nklvkgeftv rgkkvdlgni kanllvvssk
      301 ndnlipqeqs rplmdlvsse dktyqvveag hvslaltgkf sgildtwlcd rsknv
//
LOCUS       WP_257984748            1072 aa            linear   BCT 02-MAR-2025
DEFINITION  ice-binding family protein [Psychroflexus sp. MES1-P1E].
ACCESSION   WP_257984748
VERSION     WP_257984748.1
KEYWORDS    RefSeq.
SOURCE      Psychroflexus sp. MES1-P1E
  ORGANISM  Psychroflexus sp. MES1-P1E
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Psychroflexus.
REFERENCE   1  (residues 1 to 1072)
  AUTHORS   Vance,T.D.R., Bayer-Giraldi,M., Davies,P.L. and Mangiagalli,M.
  TITLE     Ice-binding proteins and the 'domain of unknown function' 3494
            family
  JOURNAL   FEBS J 286 (5), 855-873 (2019)
   PUBMED   30680879
REFERENCE   2  (residues 1 to 1072)
  AUTHORS   Do,H., Kim,S.J., Kim,H.J. and Lee,J.H.
  TITLE     Structure-based characterization and antifreeze properties of a
            hyperactive ice-binding protein from the Antarctic bacterium
            Flavobacterium frigoris PS1
  JOURNAL   Acta Crystallogr D Biol Crystallogr 70 (Pt 4), 1061-1073 (2014)
   PUBMED   24699650
REFERENCE   3  (residues 1 to 1072)
  AUTHORS   Lee,J.H., Park,A.K., Do,H., Park,K.S., Moh,S.H., Chi,Y.M. and
            Kim,H.J.
  TITLE     Structural basis for antifreeze activity of ice-binding protein
            from arctic yeast
  JOURNAL   J Biol Chem 287 (14), 11460-11468 (2012)
   PUBMED   22303017
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023425.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11999.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Psychroflexus sp. MES1-P1E"
                     /db_xref="taxon:2058320"
     Protein         1..1072
                     /product="ice-binding family protein"
                     /calculated_mol_wt=116443
     Region          41..227
                     /region_name="Ice_binding"
                     /note="Ice-binding-like; pfam11999"
                     /db_xref="CDD:432251"
     Region          <248..438
                     /region_name="Vgb"
                     /note="Streptogramin lyase [Defense mechanisms]; COG4257"
                     /db_xref="CDD:443399"
     Region          996..1064
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     cl46851"
                     /db_xref="CDD:481191"
ORIGIN      
        1 mktiilsiai igysfstiaq deqppidiyl gtaanfilft gagaiantgi sditgdvgsh
       61 agaiagfglp tvlngtient nsttaqalld laaacvqlqn ipatitdhsg ifgsiegeti
      121 ypgvysnaaa vsitgtltld aqgdpdamfi fkitgalnsv agatvllang assenvywia
      181 vgalalgant tmkgtaiayp gavslgagss idgslystvg aiavdstegt kptyntpfgc
      241 dintylfqdn dvyaidlasg ssyeiatdit tgninatgyn pvdgyiwgsl sapektivrv
      301 gknfnttsyy idelpssdrk igdvsadgiy ylkgedttyy kidldpssan faqhqstesl
      361 sqnisiddwa fnavdgnlya iekisnilyr idpsdgnvqt mgevpilsgs tytydavyfd
      421 vdgrfyists eigtifvvqn vqdlegsnpi dsnlfafgps ssnsdgarcp talvaqeicd
      481 ngtdddgdgl idcedpscsg fgscpiiesn isggndggle snnrlsdkis qrnynrakin
      541 yrfdrgvarr vskssnyakr spnsnfqlqn fipltvined yvidstpidl lgitnavdvy
      601 svdyiknees iasvlalkte ngvyehtkyi cdrllgaeli svstmeingh sfiksiirnt
      661 dnsiefvlsl sakitdneqs fsieshwnid qyeknitfyn fqiwsnsidn llllgqevld
      721 lleiekpisd ynnstppsvf vrkgkyfngn lklqivntna setisftagl rqtetstven
      781 mtssidlnkd yiidlefptg slfdigfris dglatpddlf msdgpwgydd savssnitaf
      841 liepnriife adefpvernv slkavtseyv avyraltprf npvnlsdfns lklnakgtgs
      901 lqitfvkksi lkwedqyktt ieltdeiqdf hisfsdiqsk leselvlddl vtivftmvse
      961 ngelvakgmt lenirfsven nemttsndfn klqaipnpmg sntsiyfasn qsedimfmvy
     1021 dqtgklvlqn nfktsigknq lifnrqslks glyiclikns innynplkll vk
//
LOCUS       WP_257985371             484 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Shewanella sp. GutCb].
ACCESSION   WP_257985371
VERSION     WP_257985371.1
KEYWORDS    RefSeq.
SOURCE      Shewanella sp. GutCb
  ORGANISM  Shewanella sp. GutCb
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Shewanellaceae; Shewanella.
REFERENCE   1  (residues 1 to 484)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 484)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 484)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 484)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Shewanella sp. GutCb"
                     /db_xref="taxon:2058315"
     Protein         1..484
                     /product="ATP-binding protein"
                     /calculated_mol_wt=53378
     Region          <213..483
                     /region_name="PRK10815"
                     /note="two-component system sensor histidine kinase PhoQ"
                     /db_xref="CDD:182754"
ORIGIN      
        1 mhslkarliv salllililm pligftlnda fkqqvksasm nelkayvyai lavtevssdg
       61 vlmpevllen qfnviqsgly aaistpntsv lksksrtafn akiietspsa tplngtnits
      121 kdtqtiawrs dsllgielpn qlpipnkgqg qfseielngq phliysfsvs felptainse
      181 sqhlnsrfpi tihiikdqte fqqqvdqftq qlwrwlmilm glllaiqmtw lwwtlkplss
      241 letelsaien gkanqlsdry ptelqavaqq lntllsteqn qrkryrnala dlahslktpl
      301 aviqsqtdls pesfeqvthi nriighqlkr aqsaagsawh lgipvvnisd klvrnlpkiy
      361 cqplitikqn vdreaifkgd eadlseilgn vldnackaaa stvllnitqn gaalvlqved
      421 dgngvnktlq aqifergira dsykmghgig laivrdlvds yhgqlsigqs qllggasfti
      481 tfky
//
LOCUS       WP_257985375              30 aa            linear   BCT 02-MAR-2025
DEFINITION  putative holin-like toxin [Bacillus sp. V5-8f].
ACCESSION   WP_257985375
VERSION     WP_257985375.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. V5-8f
  ORGANISM  Bacillus sp. V5-8f
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 30)
  AUTHORS   Rajesh,T., Anthony,T., Saranya,S., Pushpam,P.L. and Gunasekaran,P.
  TITLE     Functional characterization of a new holin-like antibacterial
            protein coding gene tmp1 from goat skin surface metagenome
  JOURNAL   Appl Microbiol Biotechnol 89 (4), 1061-1073 (2011)
   PUBMED   20927512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16935.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..30
                     /organism="Bacillus sp. V5-8f"
                     /db_xref="taxon:2053044"
     Protein         1..30
                     /product="putative holin-like toxin"
                     /calculated_mol_wt=3355
     Region          2..>24
                     /region_name="Hol_Tox"
                     /note="Putative Holin-like Toxin (Hol-Tox); pfam16935"
                     /db_xref="CDD:435666"
ORIGIN      
        1 mmdtfevisl mlsfgmfvia vlsfrnrkds
//
LOCUS       WP_257985441             283 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Bacillus sp. V5-8f].
ACCESSION   WP_257985441
VERSION     WP_257985441.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. V5-8f
  ORGANISM  Bacillus sp. V5-8f
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 283)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 283)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Bacillus sp. V5-8f"
                     /db_xref="taxon:2053044"
     Protein         1..283
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=31618
     Region          76..273
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(83,121,153,256,259)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(83,256,259)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(83,121,153)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
ORIGIN      
        1 mgkhhvstsc asdyermvfl rknsvklvts lsvvlgivwl agfvwavqdy yggqsatglk
       61 htperpvnem dgqeltival gdsltrgtgd etgkgyvglv tedvkkrfeg kvtvhnlgin
      121 gqtsrelrkq vkqrevrrql gaadtiliti ggndlfrggq tlldyspgsl sklqvnfiqn
      181 ltsilkdvrg anhnatiffv glynpfikle dgdetsrvvr ewnrlseets aafsnvvfvp
      241 tydifqlsvd dylytdrfhp nkqgyrliae rvaplikwee kqe
//
LOCUS       WP_257985493             192 aa            linear   BCT 02-MAR-2025
DEFINITION  5' nucleotidase, NT5C type [Bacillus sp. V5-8f].
ACCESSION   WP_257985493
VERSION     WP_257985493.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. V5-8f
  ORGANISM  Bacillus sp. V5-8f
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 192)
  AUTHORS   Rampazzo,C., Kost-Alimova,M., Ruzzenente,B., Dumanski,J.P. and
            Bianchi,V.
  TITLE     Mouse cytosolic and mitochondrial deoxyribonucleotidases: cDNA
            cloning of the mitochondrial enzyme, gene structures, chromosomal
            mapping and comparison with the human orthologs
  JOURNAL   Gene 294 (1-2), 109-117 (2002)
   PUBMED   12234672
REFERENCE   2  (residues 1 to 192)
  AUTHORS   Rampazzo,C., Johansson,M., Gallinaro,L., Ferraro,P., Hellman,U.,
            Karlsson,A., Reichard,P. and Bianchi,V.
  TITLE     Mammalian 5'(3')-deoxyribonucleotidase, cDNA cloning, and
            overexpression of the enzyme in Escherichia coli and mammalian
            cells
  JOURNAL   J Biol Chem 275 (8), 5409-5415 (2000)
   PUBMED   10681516
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018627.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06941.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Bacillus sp. V5-8f"
                     /db_xref="taxon:2053044"
     Protein         1..192
                     /product="5' nucleotidase, NT5C type"
                     /GO_function="GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009264 - deoxyribonucleotide catabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=22495
     Region          1..191
                     /region_name="YqfW"
                     /note="Uncharacterized conserved protein YqfW, HAD
                     superfamily [General function prediction only]; COG5663"
                     /db_xref="CDD:444382"
ORIGIN      
        1 mkfgfdiddt linlrqhafh iynnklnqnv aldvfhalkr veiheafgls deqgkemwns
       61 sleeiyyttc plypgavefl heldeqghei yyitarpkeh gertkkwlie ngfpvqegrf
      121 ffgmkdeekv kiiqnldldf yfddkpavle tlsneraqlf vkdqsynqnl glprftnwse
      181 itelvkktvk kg
//
LOCUS       WP_257985668             450 aa            linear   BCT 02-MAR-2025
DEFINITION  GH-E family nuclease, partial [Bacillus canaveralius].
ACCESSION   WP_257985668
VERSION     WP_257985668.1
KEYWORDS    RefSeq.
SOURCE      Bacillus canaveralius
  ORGANISM  Bacillus canaveralius
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 450)
  AUTHORS   Zhang,D., Iyer,L.M. and Aravind,L.
  TITLE     A novel immunity system for bacterial nucleic acid degrading toxins
            and its recruitment in various eukaryotic and DNA viral systems
  JOURNAL   Nucleic Acids Res 39 (11), 4532-4552 (2011)
   PUBMED   21306995
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025767.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14410.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Bacillus canaveralius"
                     /db_xref="taxon:1403243"
     Protein         <1..450
                     /product="GH-E family nuclease"
     Region          1..>28
                     /region_name="RHS_repeat"
                     /note="RHS Repeat; pfam05593"
                     /db_xref="CDD:461685"
     Region          22..102
                     /region_name="Rhs_assc_core"
                     /note="RHS repeat-associated core domain; TIGR03696"
                     /db_xref="CDD:274730"
     Region          375..450
                     /region_name="GH-E"
                     /note="HNH/ENDO VII superfamily nuclease with conserved
                     GHE residues; pfam14410"
                     /db_xref="CDD:433939"
ORIGIN      
        1 dalgnildvt drsgekrasy sydafgnlfs hmaapynavg ftgksydaka glvdfgarwy
       61 spnegrfttm dtfagwsnqp ltlnrysyvh nnpvnftdps ghcettsdsd dtycipkpkp
      121 ptgggnggst ppppapkpkp gaggsggsgg gkggsggsgg ssggsggggp vappppppvp
      181 tlaeliamar tnynglagsi pryngnsysg ygygysygys pgfvnwsefg ggiadgakst
      241 waglkylvkh pvktgthilk lgtgiphpel ikykynvakt ivsdarkyid essgsrvagr
      301 atfeiasvlv gtkglsnvtk vgrvakpaav arenvgvslr ledtvkpkpy snpnrrpnyg
      361 kgqvdivwen akdidgkvyd pntgeelfwd ksksragqwd mghtpenkys nwhekyikge
      421 itkeefldwy rnpnnyrpes pstnrshkye
//
LOCUS       WP_257985674             270 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Klebsiella
            michiganensis].
ACCESSION   WP_257985674
VERSION     WP_257985674.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (residues 1 to 270)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 270)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 270)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 270)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Klebsiella michiganensis"
                     /db_xref="taxon:1134687"
     Protein         1..270
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=28858
     Region          <1..258
                     /region_name="MglA"
                     /note="ABC-type sugar transport system, ATPase component
                     [Carbohydrate transport and metabolism]; COG1129"
                     /db_xref="CDD:440745"
ORIGIN      
        1 mmvgrqivdl yqheprtpgk vllevrdlag satgpvsfev nagevvsmsg lvgsgrteva
       61 rllfgadprp qgsvridgra snpadptaai adgigmvted rktqglflgh svehnidiss
      121 ldsfvaggvv krksiraavl eqmrrlrlre navelpvsal sggnqqkaal arwllrnsrl
      181 lildeptrgv digakreiye lidklaragk ailvissdlp eaigisdrvl vmrggrivhq
      241 lpsfsateee vmlhatgtft sqsgechgqq
//
LOCUS       WP_257985678             283 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Klebsiella michiganensis].
ACCESSION   WP_257985678
VERSION     WP_257985678.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (residues 1 to 283)
  AUTHORS   Yeo,C.C. and Poh,C.L.
  TITLE     Characterization of IS1474, an insertion sequence of the IS21
            family isolated from Pseudomonas alcaligenes NCIB 9867
  JOURNAL   FEMS Microbiol Lett 149 (2), 257-263 (1997)
   PUBMED   9141667
REFERENCE   2  (residues 1 to 283)
  AUTHORS   Solinas,F., Marconi,A.M., Ruzzi,M. and Zennaro,E.
  TITLE     Characterization and sequence of a novel insertion sequence,
            IS1162, from Pseudomonas fluorescens
  JOURNAL   Gene 155 (1), 77-82 (1995)
   PUBMED   7698671
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01695.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Klebsiella michiganensis"
                     /db_xref="taxon:1134687"
     Protein         1..283
                     /product="ATP-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=32463
     Region          76..281
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            146..153
                     /site_type="other"
                     /note="Walker A motif"
                     /db_xref="CDD:99707"
     Site            order(147..154,211,245)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:99707"
     Site            207..212
                     /site_type="other"
                     /note="Walker B motif"
                     /db_xref="CDD:99707"
     Site            262
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:99707"
ORIGIN      
        1 meleekitai ermldqlskp pedipncevv iervccekhg eyeqrkrilt ssiinlpspp
       61 trcpgclede lnflkdekvr wdkrvrqqta erllrqleip erfstctlds ykpvgkdser
      121 alrvcqayas kwtdrlqqgg glvmcgkpgt gknhlalaia rhviehhqss vifttalkia
      181 refkstwskt atrtedevir yftkpdlliv devgvqfgse aekmimfeii ntryerlkpt
      241 ilisnlpkde ltqfigervi drmndgggct isftwdsyre nra
//
LOCUS       WP_257985679             181 aa            linear   BCT 02-MAR-2025
DEFINITION  amino acid--tRNA ligase-related protein, partial [Klebsiella
            michiganensis].
ACCESSION   WP_257985679
VERSION     WP_257985679.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012379.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00152.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Klebsiella michiganensis"
                     /db_xref="taxon:1134687"
     Protein         1..>181
                     /product="amino acid--tRNA ligase-related protein"
                     /GO_function="GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /GO_function="GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
     Region          1..>181
                     /region_name="aspS"
                     /note="aspartyl-tRNA synthetase; Validated; PRK00476"
                     /db_xref="CDD:234775"
ORIGIN      
        1 mrteycgqlr lshvgqqvtl cgwvnrrrdl gslifidmrd regivqvffd pdradalkla
       61 selrnefciq vtgtvrarde kninsdmatg aievlasdlt iinraealpl dsnhvnteea
      121 rlkyryldlr rpemaqrlkt rakitslvrr fmddhgfldi etpmltkatp egardylvps
      181 r
//
LOCUS       WP_257985683             161 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Klebsiella
            michiganensis].
ACCESSION   WP_257985683
VERSION     WP_257985683.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (residues 1 to 161)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Klebsiella michiganensis"
                     /db_xref="taxon:1134687"
     Protein         1..>161
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          1..>161
                     /region_name="PRK09124"
                     /note="ubiquinone-dependent pyruvate dehydrogenase"
                     /db_xref="CDD:181661"
ORIGIN      
        1 mkqtvaayia ktleqagvkr iwgvtgdsln glsdslnrmg tidwmptrhe evaafaagae
       61 aqltgelavc agscgpgnlh linglfdchr nhvpvlaiaa hipsseigsg yfqethpqel
      121 frecshycel vstpeqipqv laiamrkavi nrgvsvvvlp g
//
LOCUS       WP_257985691              64 aa            linear   BCT 02-MAR-2025
DEFINITION  SulP family inorganic anion transporter, partial [Klebsiella
            michiganensis].
ACCESSION   WP_257985691
VERSION     WP_257985691.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00916.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..64
                     /organism="Klebsiella michiganensis"
                     /db_xref="taxon:1134687"
     Protein         1..>64
                     /product="SulP family inorganic anion transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:1902358 - sulfate transmembrane transport
                     [Evidence IEA]"
     Region          1..>64
                     /region_name="PRK11660"
                     /note="putative transporter; Provisional; cl46980"
                     /db_xref="CDD:481320"
ORIGIN      
        1 mnrlfsshvm pfralidacw kekytasrft rdviagitvg iiaiplamal aigsgvapqy
       61 glyt
//
LOCUS       WP_257985704             118 aa            linear   BCT 02-MAR-2025
DEFINITION  Tn7-like element transposition protein TnsE [Klebsiella
            michiganensis].
ACCESSION   WP_257985704
VERSION     WP_257985704.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (residues 1 to 118)
  AUTHORS   Shi,Q., Straus,M.R., Caron,J.J., Wang,H., Chung,Y.S., Guarne,A. and
            Peters,J.E.
  TITLE     Conformational toggling controls target site choice for the
            heteromeric transposase element Tn7
  JOURNAL   Nucleic Acids Res 43 (22), 10734-10745 (2015)
   PUBMED   26384427
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037363.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18623.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Klebsiella michiganensis"
                     /db_xref="taxon:1134687"
     Protein         1..118
                     /product="Tn7-like element transposition protein TnsE"
                     /calculated_mol_wt=13098
     Region          <7..112
                     /region_name="TnsE_C"
                     /note="TnsE C-terminal domain; pfam18623"
                     /db_xref="CDD:436628"
ORIGIN      
        1 mvskercesp raikavriry kateavllev dtsdgikmls tkvlfgselq dwidqflqir
       61 kgvvaksisw pnelldcllg elnhiginhp khqgaeagni plesieswal rfvqcivs
//
LOCUS       WP_257985705             145 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Klebsiella michiganensis].
ACCESSION   WP_257985705
VERSION     WP_257985705.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (residues 1 to 145)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Klebsiella michiganensis"
                     /db_xref="taxon:1134687"
     Protein         <1..145
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <1..139
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 vldaaldcal vslpqgtppp ddleyvsifk eqlllvlpan pqrfrfaafa qgctyramge
       61 aflaqseeve seiqdvgsyh amlacvasgg yagivpqsvl dtltlpeasq lrpvgqaitq
      121 liwrkgyasp alekmrqlle sasdl
//
LOCUS       WP_257985722              60 aa            linear   BCT 02-MAR-2025
DEFINITION  ribbon-helix-helix domain-containing protein [Bacillus sp. M6-12].
ACCESSION   WP_257985722
VERSION     WP_257985722.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. M6-12
  ORGANISM  Bacillus sp. M6-12
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024064.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12651.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..60
                     /organism="Bacillus sp. M6-12"
                     /db_xref="taxon:2054166"
     Protein         1..60
                     /product="ribbon-helix-helix domain-containing protein"
                     /calculated_mol_wt=6920
     Region          7..49
                     /region_name="RHH_3"
                     /note="Ribbon-helix-helix domain; pfam12651"
                     /db_xref="CDD:289422"
ORIGIN      
        1 menklknrtr ytatvdtdlv enlkelsnkt ripqsklmde aielllkqhg vrvkrkkkae
//
LOCUS       WP_257985726             676 aa            linear   BCT 02-MAR-2025
DEFINITION  phospholipase D-like domain-containing protein [Bacillus sp.
            M6-12].
ACCESSION   WP_257985726
VERSION     WP_257985726.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. M6-12
  ORGANISM  Bacillus sp. M6-12
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13091.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Bacillus sp. M6-12"
                     /db_xref="taxon:2054166"
     Protein         1..676
                     /product="phospholipase D-like domain-containing protein"
                     /calculated_mol_wt=75510
     Region          87..495
                     /region_name="Cls"
                     /note="Phosphatidylserine/phosphatidylglycerophosphate/car
                     diolipin synthase [Lipid transport and metabolism];
                     COG1502"
                     /db_xref="CDD:441111"
     Region          335..495
                     /region_name="PLDc_Nuc_like_unchar1_2"
                     /note="Putative catalytic domain, repeat 2, of
                     uncharacterized hypothetical proteins similar to Nuc, an
                     endonuclease from Salmonella typhimurium; cd09173"
                     /db_xref="CDD:197270"
     Site            order(444,446,464,466,477)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197270"
     Site            444
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197270"
ORIGIN      
        1 mnnknrkkql svamivamtv ttipfnvlsv kaetlsengg fenrnvakdp lrvsdeegai
       61 nvyfnktamt eyaypgnean qsvnleqqli nrineatdti diatyeinlp nlvdalmdka
      121 segvqvrmva dakpdggaee ddgrydtmrl nveklvrghd niigtdddvh viadspifav
      181 tdpterksmg lpetaedise ktlkistknv tghliadgev kttsgggyys padqmhnkfv
      241 iidnswvstg twnytitgvy gseenmekni ldgnqnhsve insselasiy ktefeemygs
      301 stetpdikks nfhsrktdnt qkslyiggkl vevyfspgdg alqkltdtvk edadervfft
      361 ifswsdqglv delkykyegs yedqvgvrtg feikglfdks finqywsani dmwgktmtgs
      421 knnpntrwan papvykdnev rklhaktmli dadtdsdptv vvgstnwsan gdstndenml
      481 yihdkditnq fvqefyarek qagvpdvlmv detnalerak llvpiaeksm kqedvdkane
      541 alsivaegkr gdlterlqvv qeainyqkqv nsvtgfveka estksgedvy lasllvdklr
      601 ttdketltnr lnaiavtnhf ntekelkhae kevylaekvg ndthirkaqe rvsalylsae
      661 rtslverlne vihrek
//
LOCUS       WP_257985760             332 aa            linear   BCT 02-MAR-2025
DEFINITION  PhnD/SsuA/transferrin family substrate-binding protein [Bacillus
            sp. M6-12].
ACCESSION   WP_257985760
VERSION     WP_257985760.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. M6-12
  ORGANISM  Bacillus sp. M6-12
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12974.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Bacillus sp. M6-12"
                     /db_xref="taxon:2054166"
     Protein         1..332
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /calculated_mol_wt=37953
     Region          <51..264
                     /region_name="TauA"
                     /note="ABC-type nitrate/sulfonate/bicarbonate transport
                     system, periplasmic component [Inorganic ion transport and
                     metabolism]; COG0715"
                     /db_xref="CDD:440479"
ORIGIN      
        1 mmekltlsfa cadydriral sigtvkptgi nlihlglpve eifwrltknq efdvsemsfs
       61 syliakergl idytaipvfp srffrhscif vnkhsgikkp sdligkkvgv peyqmtaalw
      121 irgflehdyg vkardiswfs ggmeqtgrhe kikldlpsdi tvqpiqehqt lnnmledgei
      181 dafitaraps aflngssnie rlfphyveve keyylrtgyf pimhlivirn ailekhpwva
      241 nnlitafeqs kqlvydeynq taalstslpw qvnevertks imgedfwpyg ieknistisa
      301 alqysreqgl tktemsiedl fvtstlfskf ki
//
LOCUS       WP_257985761             112 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding enzyme [Bacillus sp. M6-12].
ACCESSION   WP_257985761
VERSION     WP_257985761.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. M6-12
  ORGANISM  Bacillus sp. M6-12
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024591.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13193.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Bacillus sp. M6-12"
                     /db_xref="taxon:2054166"
     Protein         1..112
                     /product="AMP-binding enzyme"
                     /calculated_mol_wt=12652
     Region          <2..76
                     /region_name="PRK08315"
                     /note="AMP-binding domain protein; Validated"
                     /db_xref="CDD:236236"
ORIGIN      
        1 mggyylyphe ieeifytyps vmdipivglp dsvlgeisca ailmkpgyda tvedmkifia
       61 ervadykvpd kilfmenlsp hhtlrknsea gfkrlnnqtk scefkmkrsi dg
//
LOCUS       WP_257985767             235 aa            linear   BCT 02-MAR-2025
DEFINITION  orotidine 5'-phosphate decarboxylase / HUMPS family protein
            [Bacillus sp. M6-12].
ACCESSION   WP_257985767
VERSION     WP_257985767.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. M6-12
  ORGANISM  Bacillus sp. M6-12
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012441.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00215.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Bacillus sp. M6-12"
                     /db_xref="taxon:2054166"
     Protein         1..235
                     /product="orotidine 5'-phosphate decarboxylase / HUMPS
                     family protein"
                     /EC_number="4.1.1.23"
                     /GO_function="GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA]"
                     /GO_process="GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /calculated_mol_wt=25146
     Region          12..209
                     /region_name="UlaD"
                     /note="3-keto-L-gulonate-6-phosphate decarboxylase
                     [Carbohydrate transport and metabolism]; COG0269"
                     /db_xref="CDD:440039"
ORIGIN      
        1 mnetqktgek lmepivqisl dltnlvdale maeiaveagi dwievgtpll lgeglhavra
       61 lrgaypdypi vadlktmdgg yleaemmaka gathvvvmgv ahpatiravv kaardyniev
      121 mgdimaaadp vacakmleen gvdyiivhtg fdergedper spfdhldkvv navsipvqav
      181 gglsvaqaae mpkhgaplvv vgaplvidkk efrpstnkfe lkavledlvh kvkny
//
LOCUS       WP_257985669             179 aa            linear   BCT 02-MAR-2025
DEFINITION  TnsD family Tn7-like transposition protein [Bacillus canaveralius].
ACCESSION   WP_257985669
VERSION     WP_257985669.1
KEYWORDS    RefSeq.
SOURCE      Bacillus canaveralius
  ORGANISM  Bacillus canaveralius
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 179)
  AUTHORS   Mitra,R., McKenzie,G.J., Yi,L., Lee,C.A. and Craig,N.L.
  TITLE     Characterization of the TnsD-attTn7 complex that promotes
            site-specific insertion of Tn7
  JOURNAL   Mob DNA 1 (1), 18 (2010)
   PUBMED   20653944
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027308.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15978.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Bacillus canaveralius"
                     /db_xref="taxon:1403243"
     Protein         1..179
                     /product="TnsD family Tn7-like transposition protein"
                     /calculated_mol_wt=20664
     Region          1..>173
                     /region_name="TnsD"
                     /note="Tn7-like transposition protein D; pfam15978"
                     /db_xref="CDD:379756"
ORIGIN      
        1 mqingyanyl gkvhqqyftq qfkgyygkef ltlvdcdfde hsdtswlrsi vrkhrkvfhp
       61 lqhllllsfl nvsvkdldqf kgkqykpfgq apyyclnpaa ghyknrvied vtittctdtr
      121 rpvgtlsckc gfvysrrgpn idendvfrig rikvfgdiwl aklkelvasg lsyyvsnkf
//
LOCUS       WP_257985893             216 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar biosynthetic protein FliO [Bacillus sp. M6-12].
ACCESSION   WP_257985893
VERSION     WP_257985893.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. M6-12
  ORGANISM  Bacillus sp. M6-12
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 216)
  AUTHORS   Fabiani,F.D., Renault,T.T., Peters,B., Dietsche,T., Galvez,E.J.C.,
            Guse,A., Freier,K., Charpentier,E., Strowig,T., Franz-Wachtel,M.,
            Macek,B., Wagner,S., Hensel,M. and Erhardt,M.
  TITLE     A flagellum-specific chaperone facilitates assembly of the core
            type III export apparatus of the bacterial flagellum
  JOURNAL   PLoS Biol 15 (8), e2002267 (2017)
   PUBMED   28771474
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 216)
  AUTHORS   Minamino,T. and Macnab,R.M.
  TITLE     Components of the Salmonella flagellar export apparatus and
            classification of export substrates
  JOURNAL   J Bacteriol 181 (5), 1388-1394 (1999)
   PUBMED   10049367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016250.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04347.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Bacillus sp. M6-12"
                     /db_xref="taxon:2054166"
     Protein         1..216
                     /product="flagellar biosynthetic protein FliO"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0044781 - bacterial-type flagellum
                     organization [Evidence IEA]"
                     /calculated_mol_wt=24054
     Region          3..216
                     /region_name="FliO"
                     /note="Flagellar biosynthesis protein, FliO; cl01247"
                     /db_xref="CDD:445331"
ORIGIN      
        1 mfsikkllql mlitalalhg mvytahaeql dksvkdwyks pqndegqkkg eepqsapgta
       61 ssagltfwdf lrmifatifv vallyfmlkf inkknrayqk anyienlggt slganrsiql
      121 ikvggrvlvv gvgeniqllk eiadeneysd llnehnekle rliqpgdfit kllqrtknsg
      181 sggngfslel rkqledmags rkklkdelds kgrdge
//
LOCUS       WP_257985936             124 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Bacillus sp. M6-12].
ACCESSION   WP_257985936
VERSION     WP_257985936.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. M6-12
  ORGANISM  Bacillus sp. M6-12
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Bacillus sp. M6-12"
                     /db_xref="taxon:2054166"
     Protein         1..124
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=14049
     Region          1..111
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
ORIGIN      
        1 manvtkrtid yyttkgllea srsdsnyryy dkeaidqlrf iekcknngls lesikqlikc
       61 rdlkqpdiek asrelgeklk dlntdlgtil smlekadgns klhvkrtisk eslsliqsli
      121 lllv
//
LOCUS       WP_257985940             229 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Bacillus sp. M6-12].
ACCESSION   WP_257985940
VERSION     WP_257985940.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. M6-12
  ORGANISM  Bacillus sp. M6-12
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13751.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Bacillus sp. M6-12"
                     /db_xref="taxon:2054166"
     Protein         1..229
                     /product="transposase"
                     /calculated_mol_wt=26866
     Region          <12..171
                     /region_name="transpos_IS1182"
                     /note="IS1182 family transposase; NF033551"
                     /db_xref="CDD:468080"
ORIGIN      
        1 mgeekeprfd flipygtylk dktrkarkdi knvknwtyve qddcficpnd rkvtfkkyqm
       61 kknasgheqs ykiyecedct dcplkpqctk gkgnrqvhwn tvfeemkaka kaalecddka
      121 aiyarrkvev esvfghikgn rsfrrfslrg ldkvhvefgi valahnmmkv agirlatfik
      181 lirtkrswrk svvflqllyc frdflespff mmciqqmmec aitpllysf
//
LOCUS       WP_257985947              74 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Bacillus sp.
            M6-12].
ACCESSION   WP_257985947
VERSION     WP_257985947.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. M6-12
  ORGANISM  Bacillus sp. M6-12
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 74)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 74)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 74)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 74)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Bacillus sp. M6-12"
                     /db_xref="taxon:2054166"
     Protein         1..74
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=7700
     Region          1..>64
                     /region_name="LolD"
                     /note="ABC-type lipoprotein export system, ATPase
                     component [Cell wall/membrane/envelope biogenesis];
                     COG1136"
                     /db_xref="CDD:440751"
ORIGIN      
        1 mdtvlqangi kkvygvrgnv ysalngidlq itrgefvgim gpsaagksti lnilstidtp
       61 segsslltsk ifwn
//
LOCUS       WP_257985957             208 aa            linear   BCT 02-MAR-2025
DEFINITION  His/Gly/Thr/Pro-type tRNA ligase C-terminal domain-containing
            protein [Bacillus sp. M6-12].
ACCESSION   WP_257985957
VERSION     WP_257985957.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. M6-12
  ORGANISM  Bacillus sp. M6-12
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 208)
  AUTHORS   Wolf,Y.I., Aravind,L., Grishin,N.V. and Koonin,E.V.
  TITLE     Evolution of aminoacyl-tRNA synthetases--analysis of unique domain
            architectures and phylogenetic trees reveals a complex history of
            horizontal gene transfer events
  JOURNAL   Genome Res 9 (8), 689-710 (1999)
   PUBMED   10447505
REFERENCE   2  (residues 1 to 208)
  AUTHORS   Aberg,A., Yaremchuk,A., Tukalo,M., Rasmussen,B. and Cusack,S.
  TITLE     Crystal structure analysis of the activation of histidine by
            Thermus thermophilus histidyl-tRNA synthetase
  JOURNAL   Biochemistry 36 (11), 3084-3094 (1997)
   PUBMED   9115984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015113.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03129.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Bacillus sp. M6-12"
                     /db_xref="taxon:2054166"
     Protein         1..208
                     /product="His/Gly/Thr/Pro-type tRNA ligase C-terminal
                     domain-containing protein"
                     /calculated_mol_wt=23750
     Region          <1..204
                     /region_name="ThrS"
                     /note="Threonyl-tRNA synthetase [Translation, ribosomal
                     structure and biogenesis]; COG0441"
                     /db_xref="CDD:440210"
ORIGIN      
        1 mgevemwdka enalesvlkh kelnyqvnhg dgafygpkid fhildslgrs wqcgtvqldf
       61 qmpekfncsy igednklhrp imihraiygs ierfmailie hfagdfplwl spvqvkilpi
      121 seahlqyanq inldleearf rveiddrvek iglkireaev qkapymilvg nkemengsva
      181 vrkrkdgnlg emtlpklidl lmaeqikg
//
LOCUS       WP_257985987             291 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Bacillus sp.
            M6-12].
ACCESSION   WP_257985987
VERSION     WP_257985987.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. M6-12
  ORGANISM  Bacillus sp. M6-12
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 291)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 291)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 291)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 291)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Bacillus sp. M6-12"
                     /db_xref="taxon:2054166"
     Protein         1..291
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=32688
     Region          10..243
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            42..49
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213260"
     Site            order(45..46,48..50,85,155..156,189)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:213260"
     Site            82..85
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213260"
     Site            131..140
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213260"
     Site            151..156
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213260"
     Site            159..162
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213260"
     Site            185..191
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213260"
ORIGIN      
        1 mlshipdshi vletiqksyn nrpvlnginl sikfgefvav vgksgcgkst llrlvaglek
       61 ydggtitvag aglnrlnrqa rimfqdgrll pwkrvidnvg lglhgdwkde afqalrnvgl
      121 eergqdwpgk lsggqkqrva laralvhkpd illldeplga ldaltriemq dlietiwkek
      181 kftsilvthd veeavaiadr viliedgkiv lnkqinlprp rqrsnsvfan hveeildrim
      241 lrgkekellv vnrqpetfpl vrksiktvse snfkeeavrn rledhqnrkd l
//
LOCUS       WP_257986173             596 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP phosphoribosyltransferase regulatory subunit [Klebsiella
            aerogenes].
ACCESSION   WP_257986173
VERSION     WP_257986173.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella aerogenes
  ORGANISM  Klebsiella aerogenes
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024785.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13393.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Klebsiella aerogenes"
                     /db_xref="taxon:548"
     Protein         1..596
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /calculated_mol_wt=68078
     Region          7..111
                     /region_name="RAYT"
                     /note="REP element-mobilizing transposase RayT [Mobilome:
                     prophages, transposons]; COG1943"
                     /db_xref="CDD:441546"
     Region          210..592
                     /region_name="HisS"
                     /note="Histidyl-tRNA synthetase [Translation, ribosomal
                     structure and biogenesis]; COG0124"
                     /db_xref="CDD:439894"
ORIGIN      
        1 mphlaqlrgh ngeelfrhee dysafercmq daaqryavsi hswslavpri lllvsapdkq
       61 alsrfiqhig rsyvpyynrc yqrhgalwds rylcsplepe tyflavkrfi ecdedgspgc
      121 hshgnlpsgl ivshpvwlkl geneqqrqah fqefcrqpvn ralvtrirha laqncllasp
      181 alsqqleaqm erplrarhcg rprkyessps eqwtwlelqa eqflrqhgyq qirlplleht
      241 slfapggpvm adkgklrgdg ttgclrlmad nphtavmsri wysgamfrqr sldgdirqnh
      301 qigveafgmp gvdielehlv mqavffrrig lgemaelhin mlgdeaslaa frralrdyyq
      361 pisrllnpeq qhwlekhpew lihhedillq rlapaapcla dfitvdsrhr fqrlqhaltq
      421 agiawqydpa lfpandycql vfewrsiame reliisrggr ydacasriae kpvsacgfaf
      481 mmepivtllg yrpqparahp ptdiviiagq prvaakavll grslrqqfpy lsiindcspq
      541 ristryknsr rlgarfilei egdgetvils dsrdhrikic tldnitdrla qvvlsq
//
LOCUS       WP_257986014             181 aa            linear   BCT 02-MAR-2025
DEFINITION  replication protein P [Klebsiella aerogenes].
ACCESSION   WP_257986014
VERSION     WP_257986014.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella aerogenes
  ORGANISM  Klebsiella aerogenes
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (residues 1 to 181)
  AUTHORS   Mallory,J.B., Alfano,C. and McMacken,R.
  TITLE     Host virus interactions in the initiation of bacteriophage lambda
            DNA replication. Recruitment of Escherichia coli DnaB helicase by
            lambda P replication protein
  JOURNAL   J Biol Chem 265 (22), 13297-13307 (1990)
   PUBMED   2165499
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018671.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06992.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Klebsiella aerogenes"
                     /db_xref="taxon:548"
     Protein         1..181
                     /product="replication protein P"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /calculated_mol_wt=20446
     Region          <41..147
                     /region_name="Phage_lambda_P"
                     /note="Replication protein P; pfam06992"
                     /db_xref="CDD:462061"
ORIGIN      
        1 mgeifsnrwt qkngaapsdm wiaqigsmsd aqitlvcrqc mercaagntw ppdlaefval
       61 vsasganpfn ltseavmaey krwrtesyry sgsdrypwkq dvlyhicvem rrtgvernlt
      121 egelkklaek lltkwtkhla ngfsippirr qleaprhpag ptpaqllmee ykrrkaaglt
      181 k
//
LOCUS       WP_257986743             241 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase family protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257986743
VERSION     WP_257986743.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 241)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00725.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..241
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
     Region          <1..236
                     /region_name="fadJ"
                     /note="fatty acid oxidation complex subunit alpha FadJ;
                     PRK11154"
                     /db_xref="CDD:236864"
ORIGIN      
        1 vqlakrqgkt pivvadkagf yvnrilapyi neamrllveg epievidnal vkfgfpvgpi
       61 qlldevgidt gtkiipvleg afgerfsppa niidailkdd rkgrknnrgf ylyetkgrks
      121 kkrpdpavyp llgigrpqsr lsaqqvaerc vmmmlneaar cfdeqiirsa rdgdigavfg
      181 igfppflggp frymdtigag evaailqrla aqfgprftpc dtllrmaeqg ttfwpaderl
      241 t
//
LOCUS       WP_257986744             157 aa            linear   BCT 02-MAR-2025
DEFINITION  SAM-dependent methyltransferase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257986744
VERSION     WP_257986744.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00590.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>157
                     /product="SAM-dependent methyltransferase"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
     Region          1..>157
                     /region_name="TP_methylase"
                     /note="S-AdoMet-dependent tetrapyrrole methylases;
                     cl00304"
                     /db_xref="CDD:444820"
     Site            order(19,21..26,28,66,90..99,101..102,105,113,115..118,
                     120..121,124..125,128,130..132,136..144,154..155)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381168"
ORIGIN      
        1 maetfdphcv wfvgagpgdr elitlkgyrl lqqaqvviya gslintella ycppqaechd
       61 saalhleqil dlmeagvkag ktvvrlqtgd vslygsvreq geeltrrgir wqvvpgvsaf
      121 lgaaaelgve ytvpevsqsl iitrlegrtp vpareql
//
LOCUS       WP_257986747             321 aa            linear   BCT 02-MAR-2025
DEFINITION  CSS-motif domain-containing protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257986747
VERSION     WP_257986747.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 321)
  AUTHORS   Herbst,S., Lorkowski,M., Sarenko,O., Nguyen,T.K.L., Jaenicke,T. and
            Hengge,R.
  TITLE     Transmembrane redox control and proteolysis of PdeC, a novel type
            of c-di-GMP phosphodiesterase
  JOURNAL   EMBO J 37 (8) (2018)
   PUBMED   29514851
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024202.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12792.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>321
                     /product="CSS-motif domain-containing protein"
     Region          1..>320
                     /region_name="YjcC"
                     /note="Redox-sensing c-di-GMP phosphodiesterase, contains
                     CSS-motif and EAL domains [Signal transduction
                     mechanisms]; COG4943"
                     /db_xref="CDD:443970"
ORIGIN      
        1 mivvsllvpa ilvgllslgm avrqlqrdta itaeillgqv dhvtsiarht lhttaqmanq
       61 pcenvvekmt etgaltpyir stglvrgdtl vcssitgsrq qsirsvyglp lsaemgslei
      121 taingtrsvp hqtaiiyasg agngitvfsv vdgryftdlm etlddenhai lrlrfsdgpv
      181 issqdkgted lagfsavfhs dfsqariqii tpwqslaryl vrnmiflgpa sllltlatly
      241 lwrrwltgkl sladeiakgm argefvvhyq pvceaasgmc tgaealmrwq radgssispa
      301 lfiqaaeeee miisltrhlf g
//
LOCUS       WP_257986764             257 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA translocase FtsK, partial [Klebsiella pneumoniae].
ACCESSION   WP_257986764
VERSION     WP_257986764.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 257)
  AUTHORS   Sivanathan,V., Allen,M.D., de Bekker,C., Baker,R.,
            Arciszewska,L.K., Freund,S.M., Bycroft,M., Lowe,J. and
            Sherratt,D.J.
  TITLE     The FtsK gamma domain directs oriented DNA translocation by
            interacting with KOPS
  JOURNAL   Nat Struct Mol Biol 13 (11), 965-972 (2006)
   PUBMED   17057717
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020952.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09397.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..257
                     /product="DNA translocase FtsK"
     Region          <1..257
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
ORIGIN      
        1 rnlagyneki aeaarmgrpi pdpywkpgds mdavhpvlek lpyivvlvde fadlmmtvgk
       61 kveeliarla qkaraagihl vlatqrpsvd vitglikani ptriaftvss kidsrtildq
      121 ggaesllgmg dmlysgpnst tpvrvhgafv rdqevhavvq dwkargrpqy vdgitsdses
      181 egggggfdgg eeldplfdqa vnfvtekrka sisgvqrqfr igynraarii eqmeaqgivs
      241 eqghngnrev lapppfe
//
LOCUS       WP_257986773              98 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6216 family protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257986773
VERSION     WP_257986773.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 98)
  AUTHORS   Hejnova,J., Pages,D., Rusniok,C., Glaser,P., Sebo,P. and
            Buchrieser,C.
  TITLE     Specific regions of genome plasticity and genetic diversity of the
            commensal Escherichia coli A0 34/86
  JOURNAL   Int J Med Microbiol 296 (8), 541-546 (2006)
   PUBMED   17049458
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040027.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19723.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>98
                     /product="DUF6216 family protein"
     Region          11..>98
                     /region_name="DUF6216"
                     /note="Family of unknown function (DUF6216); pfam19723"
                     /db_xref="CDD:437555"
ORIGIN      
        1 meslissiwn fdglinstli fvtfgllgvf iwkragsays llnrlwefcl ggktfhdgki
       61 nayfnerndv erfnvlfnvg arnkeeiksl inwtkkkn
//
LOCUS       WP_257986772             308 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleoside recognition domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257986772
VERSION     WP_257986772.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 308)
  AUTHORS   Hantke,K.
  TITLE     Is the bacterial ferrous iron transporter FeoB a living fossil?
  JOURNAL   Trends Microbiol 11 (5), 192-195 (2003)
   PUBMED   12781516
REFERENCE   2  (residues 1 to 308)
  AUTHORS   Loewen,S.K., Ng,A.M., Yao,S.Y., Cass,C.E., Baldwin,S.A. and
            Young,J.D.
  TITLE     Identification of amino acid residues responsible for the
            pyrimidine and purine nucleoside specificities of human
            concentrative Na(+) nucleoside cotransporters hCNT1 and hCNT2
  JOURNAL   J Biol Chem 274 (35), 24475-24484 (1999)
   PUBMED   10455109
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019292.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07670.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..308
                     /product="nucleoside recognition domain-containing
                     protein"
     Region          1..135
                     /region_name="Gate"
                     /note="Nucleoside recognition; cl42053"
                     /db_xref="CDD:455398"
     Region          17..256
                     /region_name="COG3366"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:442593"
ORIGIN      
        1 visiimaagk ssvdvalytl lpimvimlii mkylevrgil dvivrwvapl lkpfgltgms
       61 afaliqinfv sfaaplatls imdkrgvsdr qmaatlamvf amgqgnvfyp ltpfglhwla
      121 sivisvvggl caaavawhvt grrlsvaesp raealpnaeq nsqgilavin sagsdairla
      181 lgavpmlils ltivgllqga gaidllqqll kpllswlhip qnfvlpalvk cvaggtayfg
      241 viseliqqgk vtvdqvnasa glliqtfdlp gigiflgiss rfvrlfrfva paaivgillr
      301 tvlhlilf
//
LOCUS       WP_257986778             131 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6216 family protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257986778
VERSION     WP_257986778.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 131)
  AUTHORS   Hejnova,J., Pages,D., Rusniok,C., Glaser,P., Sebo,P. and
            Buchrieser,C.
  TITLE     Specific regions of genome plasticity and genetic diversity of the
            commensal Escherichia coli A0 34/86
  JOURNAL   Int J Med Microbiol 296 (8), 541-546 (2006)
   PUBMED   17049458
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040027.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19723.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..131
                     /product="DUF6216 family protein"
     Region          <1..123
                     /region_name="DUF6216"
                     /note="Family of unknown function (DUF6216); pfam19723"
                     /db_xref="CDD:437555"
ORIGIN      
        1 alkpsalvrl gddkswvwin dhiaessiwt nnylplnwte wkldkkqces edfdktvfse
       61 kagisvrsvd ricenfssgs lsdtlnniik nqklawvlai ypfiftiicf fsllrrgaas
      121 klynevhnsq n
//
LOCUS       WP_257986781             101 aa            linear   BCT 02-MAR-2025
DEFINITION  AIR synthase-related protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257986781
VERSION     WP_257986781.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 101)
  AUTHORS   Li,C., Kappock,T.J., Stubbe,J., Weaver,T.M. and Ealick,S.E.
  TITLE     X-ray crystal structure of aminoimidazole ribonucleotide synthetase
            (PurM), from the Escherichia coli purine biosynthetic pathway at
            2.5 A resolution
  JOURNAL   Structure 7 (9), 1155-1166 (1999)
   PUBMED   10508786
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014788.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02769.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..101
                     /product="AIR synthase-related protein"
     Region          <1..100
                     /region_name="PurM"
                     /note="Phosphoribosylaminoimidazole (AIR) synthetase
                     [Nucleotide transport and metabolism]; COG0150"
                     /db_xref="CDD:439920"
ORIGIN      
        1 iahltgggfw eniprvlpdn tqaiidessw qwpsvfnwlq tagnvsqhem yrtfncgvgm
       61 iialpaaead kaiallndkg enawkigyik asdseqrvvi a
//
LOCUS       WP_257986787              90 aa            linear   BCT 02-MAR-2025
DEFINITION  MaoC/PaaZ C-terminal domain-containing protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257986787
VERSION     WP_257986787.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 90)
  AUTHORS   Fukui,T., Shiomi,N. and Doi,Y.
  TITLE     Expression and characterization of (R)-specific enoyl coenzyme A
            hydratase involved in polyhydroxyalkanoate biosynthesis by
            Aeromonas caviae
  JOURNAL   J Bacteriol 180 (3), 667-673 (1998)
   PUBMED   9457873
REFERENCE   2  (residues 1 to 90)
  AUTHORS   Steinebach,V., Benen,J.A., Bader,R., Postma,P.W., De Vries,S. and
            Duine,J.A.
  TITLE     Cloning of the maoA gene that encodes aromatic amine oxidase of
            Escherichia coli W3350 and characterization of the overexpressed
            enzyme
  JOURNAL   Eur J Biochem 237 (3), 584-591 (1996)
   PUBMED   8647101
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013722.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01575.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..90
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
     Region          <1..85
                     /region_name="hot_dog"
                     /note="The hotdog fold was initially identified in the E.
                     coli FabA (beta-hydroxydecanoyl-acyl carrier protein
                     (ACP)-dehydratase) structure and subsequently in 4HBT
                     (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A
                     number of other seemingly unrelated...; cl00509"
                     /db_xref="CDD:469797"
     Site            order(1..2,5,15..17)
                     /site_type="active"
                     /note="active site 1 [active]"
                     /db_xref="CDD:239536"
ORIGIN      
        1 aglfvdagvg pvianygmen lrfiepvkpg dtiqvrltck rktvkrqrsa dekatgvvew
       61 aveifnqhqq avalysiltl varqqgdfpa
//
LOCUS       WP_257986798             126 aa            linear   BCT 02-MAR-2025
DEFINITION  AIR synthase-related protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257986798
VERSION     WP_257986798.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 126)
  AUTHORS   Li,C., Kappock,T.J., Stubbe,J., Weaver,T.M. and Ealick,S.E.
  TITLE     X-ray crystal structure of aminoimidazole ribonucleotide synthetase
            (PurM), from the Escherichia coli purine biosynthetic pathway at
            2.5 A resolution
  JOURNAL   Structure 7 (9), 1155-1166 (1999)
   PUBMED   10508786
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014788.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02769.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..126
                     /product="AIR synthase-related protein"
     Region          <1..126
                     /region_name="PRK00943"
                     /note="selenide, water dikinase SelD"
                     /db_xref="CDD:234870"
ORIGIN      
        1 vkamtdvtgf gllghlsevc rgagvqaqlr yadipklpgv edyiaagavp ggtgrnfasy
       61 ghlmgempte wrdllcdpqt sgglllavtp eaeaevqaaa aefgiklaai gelvtarggr
      121 pmieir
//
LOCUS       WP_257986803              63 aa            linear   BCT 02-MAR-2025
DEFINITION  nitronate monooxygenase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257986803
VERSION     WP_257986803.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 63)
  AUTHORS   Gadda,G. and Francis,K.
  TITLE     Nitronate monooxygenase, a model for anionic flavin semiquinone
            intermediates in oxidative catalysis
  JOURNAL   Arch Biochem Biophys 493 (1), 53-61 (2010)
   PUBMED   19577534
REFERENCE   2  (residues 1 to 63)
  AUTHORS   Francis,K. and Gadda,G.
  TITLE     Kinetic evidence for an anion binding pocket in the active site of
            nitronate monooxygenase
  JOURNAL   Bioorg Chem 37 (5), 167-172 (2009)
   PUBMED   19683782
REFERENCE   3  (residues 1 to 63)
  AUTHORS   Ha,J.Y., Min,J.Y., Lee,S.K., Kim,H.S., Kim,D.J., Kim,K.H.,
            Lee,H.H., Kim,H.K., Yoon,H.J. and Suh,S.W.
  TITLE     Crystal structure of 2-nitropropane dioxygenase complexed with FMN
            and substrate. Identification of the catalytic base
  JOURNAL   J Biol Chem 281 (27), 18660-18667 (2006)
   PUBMED   16682407
REFERENCE   4  (residues 1 to 63)
  AUTHORS   Francis,K., Russell,B. and Gadda,G.
  TITLE     Involvement of a flavosemiquinone in the enzymatic oxidation of
            nitroalkanes catalyzed by 2-nitropropane dioxygenase
  JOURNAL   J Biol Chem 280 (7), 5195-5204 (2005)
   PUBMED   15582992
REFERENCE   5  (residues 1 to 63)
  AUTHORS   Gorlatova,N., Tchorzewski,M., Kurihara,T., Soda,K. and Esaki,N.
  TITLE     Purification, characterization, and mechanism of a flavin
            mononucleotide-dependent 2-nitropropane dioxygenase from Neurospora
            crassa
  JOURNAL   Appl Environ Microbiol 64 (3), 1029-1033 (1998)
   PUBMED   9501443
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015047.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03060.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..63
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>63
                     /product="nitronate monooxygenase"
                     /GO_function="GO:0018580 - nitronate monooxygenase
                     activity [Evidence IEA]"
     Region          9..>63
                     /region_name="YrpB"
                     /note="NAD(P)H-dependent flavin oxidoreductase YrpB,
                     nitropropane dioxygenase family [General function
                     prediction only]; COG2070"
                     /db_xref="CDD:441673"
ORIGIN      
        1 msnpllslld idypliqapm agvstpalaa avsnagalgs lglgastvaq aeamivatrq
       61 ltd
//
LOCUS       WP_257986804             337 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein,
            partial [Klebsiella pneumoniae].
ACCESSION   WP_257986804
VERSION     WP_257986804.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 337)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>337
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
     Region          1..>337
                     /region_name="PRK10795"
                     /note="penicillin-binding protein 2; Provisional"
                     /db_xref="CDD:236761"
ORIGIN      
        1 mpllrdeird hsaeemlfir raaiafllvv vcfgvlivnl yhlqveqhdf yqtrsnqndi
       61 kmlpiapsrg lifdrngipl vqnitlyrlq vipskipdma allqqltpiv dltpddiasf
      121 rddmhhtsry kavtlksdls dvevarfavn efrfpgvtve syqqreypyg aelahvvgyv
      181 skindsdlqr lakngeeeny aadrnigkqg iegyyekalh gttgyqevev dnhgrvvrll
      241 kevppvagkn lyltldlhlq qyiesvlkgq raavvvvdpr dggvlamvss psydpnpfvk
      301 gigyqayksl lenpdrplin rvtqglyppa stvkpym
//
LOCUS       WP_257986812             444 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA translocase FtsK, partial [Klebsiella pneumoniae].
ACCESSION   WP_257986812
VERSION     WP_257986812.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 444)
  AUTHORS   Massey,T.H., Mercogliano,C.P., Yates,J., Sherratt,D.J. and Lowe,J.
  TITLE     Double-stranded DNA translocation: structure and mechanism of
            hexameric FtsK
  JOURNAL   Mol Cell 23 (4), 457-469 (2006)
   PUBMED   16916635
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036827.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17854.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>444
                     /product="DNA translocase FtsK"
     Region          <1..444
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
ORIGIN      
        1 iklpsqreae qrarqaerdp hydnellsde eadameqdel arqfaatqqq ryghrweddn
       61 atdddeadaa aeaelarqfa atqqqryate qppgakpfsp adyefspmkt lvndgpsepl
      121 ftptpevqpq qpaqryqqpa aapqqgyqpa qhqpihqqpv ppqpqsypta sqpvqpqqpv
      181 apqghqpaap apqeslihpl lmrngdsrpl qkpttplpsl dlltpppsev epvdtfaleq
      241 marlvearla dfrikadvvn yspgpvitrf elnlapgvka arisnlsrdl arslstvavr
      301 vvevipgkpy vglelpnkkr qtvylrevld nakfrdnpsp ltvvlgkdia gdpvvadlak
      361 mphllvagtt gsgksvgvna milsmlykaq pedvrfimid pkmlelsvye giphlltevv
      421 tdmkdaanal rwsvnemerr yklm
//
LOCUS       WP_257986814             125 aa            linear   BCT 02-MAR-2025
DEFINITION  SAM-dependent methyltransferase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257986814
VERSION     WP_257986814.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00590.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..125
                     /product="SAM-dependent methyltransferase"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
     Region          <8..125
                     /region_name="TP_methylase"
                     /note="S-AdoMet-dependent tetrapyrrole methylases;
                     cl00304"
                     /db_xref="CDD:444820"
ORIGIN      
        1 dvyketglii trlegrtpvp areqleafas hqtsmaiyls vqrihrvaer lveggypatt
       61 pvaviykatw pesqtvrgtl adigdkvrda girktalilv gpflgdeyhy sklyaadfsh
      121 eyrka
//
LOCUS       WP_257986817             264 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein,
            partial [Klebsiella pneumoniae].
ACCESSION   WP_257986817
VERSION     WP_257986817.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 264)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>264
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
     Region          <1..259
                     /region_name="PRK10795"
                     /note="penicillin-binding protein 2; Provisional"
                     /db_xref="CDD:236761"
ORIGIN      
        1 agvitpnttf fgaptwtlpg tqrryrdwlk tghgmlnvtk aieesadtff yqvafemgid
       61 rihewlskfg ygqstgidln eeyagvlpsr ewkqrvhkkp wyqgdtisvg igqgywiatp
      121 iqmvkalttl lnngkvqdph llysmkqgnh veryqqpanl pqvgdpkspy wgivrngmyg
      181 manqpngtgy klfhtapyqi aaksgtsqvf slkqnqtyna kmipvrlrdh ifytlfapyq
      241 hpkvamalil engggdgava ykhl
//
LOCUS       WP_257986973             216 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase [Bacillus halotolerans].
ACCESSION   WP_257986973
VERSION     WP_257986973.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 216)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 216)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         1..216
                     /product="phosphotransferase"
                     /calculated_mol_wt=24736
     Region          26..202
                     /region_name="COG2112"
                     /note="Predicted Ser/Thr protein kinase [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:441715"
ORIGIN      
        1 mltkaealah sviyrqnsrf dkvkekpeel tlmgkgrsay vfaitegdrk malkvffpey
       61 qatavkeaai yeklagsafy pdiyetgdsf ilmeyikgdt fynclkkgia isddmiqqve
      121 dalsdaraag lnpsdihlrn liltesgavr vidvarfeqt ktctqwddlk tayhtlykkp
      181 ifpkkipgfw leviaflykk dwfqkhfaqr krkyss
//
LOCUS       WP_257986981             517 aa            linear   BCT 02-MAR-2025
DEFINITION  SH3 domain-containing protein [Bacillus halotolerans].
ACCESSION   WP_257986981
VERSION     WP_257986981.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019844.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08239.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         1..517
                     /product="SH3 domain-containing protein"
                     /calculated_mol_wt=55177
     Region          26..155
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          101..233
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          177..311
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          329..517
                     /region_name="AmiC"
                     /note="N-acetylmuramoyl-L-alanine amidase [Cell
                     wall/membrane/envelope biogenesis]; COG0860"
                     /db_xref="CDD:440621"
ORIGIN      
        1 mskkhfvliv ciivagalfp pfsavtaaqg eaviatdemn vrsgpglsyg imaevkkger
       61 ypilkedgdw vqiqlgsgdk gwvvswlitk ekqsgtsstd ssetvtstdp dlrmrtgpgt
      121 syevigkfpq gsqtavidkd sgwikisyrn stgwvsseyv tsgsgssase esdqtessgs
      181 ttgtvgvssl nvrgsashda aiitklsrgt kltileekng wlhikvnglk gwvashyivt
      241 ssdpagdsad vsssdstkka yivyggtnlr sdastsasiv kraakgdays itgakgswye
      301 vkldngqtay vanwvvqtsk saeesgeppv adsasgsgsl knkaivvdpg hggkdsgtig
      361 ysgqfekklt iktakllask lrsagadvyv trqddtfvsl qsrvstshyr nadafisihy
      421 dsfadtstrg stayyyspak dqelasnvhs evvkrssipd rgvlfgdyyv lrenkqpaml
      481 yelgyvshpq eeaivhsnsy qekvtdgies glekyfq
//
LOCUS       WP_257987110             474 aa            linear   BCT 02-MAR-2025
DEFINITION  CDP-glycerol glycerophosphotransferase family protein [Bacillus
            halotolerans].
ACCESSION   WP_257987110
VERSION     WP_257987110.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 474)
  AUTHORS   Fitzgerald,S.N. and Foster,T.J.
  TITLE     Molecular analysis of the tagF gene, encoding
            CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase of
            Staphylococcus epidermidis ATCC 14990
  JOURNAL   J Bacteriol 182 (4), 1046-1052 (2000)
   PUBMED   10648531
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016357.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04464.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         1..474
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0047355 - CDP-glycerol
                     glycerophosphotransferase activity [Evidence IEA]"
                     /calculated_mol_wt=54156
     Region          182..428
                     /region_name="Glyphos_transf"
                     /note="CDP-Glycerol:Poly(glycerophosphate)
                     glycerophosphotransferase; cl42225"
                     /db_xref="CDD:478041"
ORIGIN      
        1 msaylsnywv lyrkyaelfe rlrykgiplg lisnfyqyis pelrvmmeee pelfgpadqh
       61 idegqiqtff eekkqsiakt ndapvkgkvi lhfdhlrfvn anyyqfdpek tavlarwsmp
      121 nycdlpvisk pevaascekg dpkpylekaf silsayddhp afgdqafrer lfkdiplfme
      181 aidtvdalft kenisavvvg ttediysrvl almcerrgav siclqhgalm gdeaflpvft
      241 tyqavfgaye agwyqqkgck peqilitghp rfdeifnrtp mdmsvfyrkl afhpskkivl
      301 iatqpfseef yssvldelst qkqlqiiikp hpweigknkl dlyhaaakkh kacrvikkem
      361 dlydilmyan aavtqtstvg leamlfqkpa ligkstgnrt ypyyeslgdf lfekpeelar
      421 tlievlqnpa myqkaeaarl sftasnypvt estlalfsel kaktgvdyrr dhse
//
LOCUS       WP_257987162             481 aa            linear   BCT 02-MAR-2025
DEFINITION  FTR1 family protein [Bacillus halotolerans].
ACCESSION   WP_257987162
VERSION     WP_257987162.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 481)
  AUTHORS   Stearman,R., Yuan,D.S., Yamaguchi-Iwai,Y., Klausner,R.D. and
            Dancis,A.
  TITLE     A permease-oxidase complex involved in high-affinity iron uptake in
            yeast
  JOURNAL   Science 271 (5255), 1552-1557 (1996)
   PUBMED   8599111
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015213.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03239.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         1..481
                     /product="FTR1 family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_component="GO:0033573 - high-affinity iron permease
                     complex [Evidence IEA]"
                     /GO_function="GO:0005381 - iron ion transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0034755 - iron ion transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=52491
     Region          216..481
                     /region_name="FTR1"
                     /note="Iron permease FTR1 family; cl00475"
                     /db_xref="CDD:469785"
ORIGIN      
        1 margltlill sllmffgsav haendpiasl lelnkqmiks vrdgdidsaq qtfetfksaw
       61 kkeepsikke nlsshskmds niamislsfi nqdankletq leelsshlet yqqavvlkka
      121 ssgqsraslt ayiqslkdtk qliekkqmge tsaaidnlit swlavegdvv sqskeaytts
      181 eenlalmkae idshpdqvik qidemiqlle piasssysww daalipireg meallvigal
      241 ltmtkkarvt rssawiwgga sagmfvslaa gigvtllfss nvfgennfll ggitgllsav
      301 mllyvgvwlh rnasmdkwre kiniqksqal kkrsllsfal isflavvreg letviffigl
      361 vgklslteli ggtaaglvvl vivgvlmmrl gmriplkpff llsmavvlym cvkflgtgvh
      421 slqlagilps daeswlpsvs vlgiypsvys tipqllillf llialiseaa khytngkelt
      481 k
//
LOCUS       WP_257987181             466 aa            linear   BCT 02-MAR-2025
DEFINITION  polysaccharide deacetylase family protein [Bacillus halotolerans].
ACCESSION   WP_257987181
VERSION     WP_257987181.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 466)
  AUTHORS   Freiberg,C., Fellay,R., Bairoch,A., Broughton,W.J., Rosenthal,A.
            and Perret,X.
  TITLE     Molecular basis of symbiosis between Rhizobium and legumes
  JOURNAL   Nature 387 (6631), 394-401 (1997)
   PUBMED   9163424
REFERENCE   2  (residues 1 to 466)
  AUTHORS   Mishra,C., Semino,C.E., McCreath,K.J., de la Vega,H., Jones,B.J.,
            Specht,C.A. and Robbins,P.W.
  TITLE     Cloning and expression of two chitin deacetylase genes of
            Saccharomyces cerevisiae
  JOURNAL   Yeast 13 (4), 327-336 (1997)
   PUBMED   9133736
REFERENCE   3  (residues 1 to 466)
  AUTHORS   Millward-Sadler,S.J., Poole,D.M., Henrissat,B., Hazlewood,G.P.,
            Clarke,J.H. and Gilbert,H.J.
  TITLE     Evidence for a general role for high-affinity non-catalytic
            cellulose binding domains in microbial plant cell wall hydrolases
  JOURNAL   Mol Microbiol 11 (2), 375-382 (1994)
   PUBMED   8170399
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013672.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01522.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         1..466
                     /product="polysaccharide deacetylase family protein"
                     /GO_function="GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=53265
     Region          53..135
                     /region_name="PdaC"
                     /note="Deacetylase PdaC; pfam13739"
                     /db_xref="CDD:463973"
     Region          157..233
                     /region_name="DUF3298"
                     /note="Protein of unknown function (DUF3298); pfam11738"
                     /db_xref="CDD:463337"
     Region          277..453
                     /region_name="CE4_SF"
                     /note="Catalytic NodB homology domain of the carbohydrate
                     esterase 4 superfamily; cl15692"
                     /db_xref="CDD:472828"
ORIGIN      
        1 mlarrikwfq vllavvcaag ligfchntsk ketvmnqvkt dsqygdveia tlvndgktfn
       61 yavnypvfkn kkmdaalksf aekevrqfqk etkdadqeht kkrnelnidy eivhyakqta
      121 avvfneykyi ggahgqnvkk tfnfdfskea flsiddifkk dsdylqklsl iayhelkknk
      181 diaaddellk egtapakenf srfavkedyi efyfdtyqva agylgeqsia ikkhllkdil
      241 keqyidkakn knkikeqkpk hevislpkee tvdpnkkvia ltfddgpnpa ttnqildslk
      301 kyeghatffv lgsrvqyype tlkrmlkegn evgnhswshp lltrlsvkea vkqindtqgm
      361 iekisgyrpt lvrppyggin delrsklkmd valwdidped wkdrnkntiv nrvmshaadg
      421 ktilihdiyg tsadaadeii krltdqgyql vtvtqleevk kqreak
//
LOCUS       WP_257987185              47 aa            linear   BCT 02-MAR-2025
DEFINITION  YrzO family protein [Bacillus halotolerans].
ACCESSION   WP_257987185
VERSION     WP_257987185.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025507.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14142.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..47
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         1..47
                     /product="YrzO family protein"
                     /calculated_mol_wt=5287
     Region          1..46
                     /region_name="YrzO"
                     /note="YrzO-like protein; pfam14142"
                     /db_xref="CDD:290847"
ORIGIN      
        1 mlegllffis agivcelaai nrngrknikq qeefnqllke llnrdin
//
LOCUS       WP_257987224             195 aa            linear   BCT 02-MAR-2025
DEFINITION  HAAS signaling domain-containing protein [Bacillus halotolerans].
ACCESSION   WP_257987224
VERSION     WP_257987224.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 195)
  AUTHORS   Ravi,J., Anantharaman,V., Chen,S.Z., Brenner,E.P., Datta,P.,
            Aravind,L. and Gennaro,M.L.
  TITLE     The phage shock protein (PSP) envelope stress response: discovery
            of novel partners and evolutionary history
  JOURNAL   mSystems 9 (6), e0084723 (2024)
   PUBMED   38809013
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046861.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22564.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         1..195
                     /product="HAAS signaling domain-containing protein"
                     /calculated_mol_wt=21780
ORIGIN      
        1 mnaqhiidry teelnaelan mpeverenti aelkghltaf lqdrmnaghs vedlreaven
       61 efshpkelae ammgegeeqk rrgsvlgksg lsvfliavii llpllppsyr yaplalylav
      121 lagyvwkrkk lmmfagvrkn kmrsqheivt isrvgagyll flavlllvqp linafvvlll
      181 ivvscaaffl ylnvk
//
LOCUS       WP_257987402             240 aa            linear   BCT 02-MAR-2025
DEFINITION  double zinc ribbon domain-containing protein [Bacillus
            halotolerans].
ACCESSION   WP_257987402
VERSION     WP_257987402.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039185.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18912.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         1..240
                     /product="double zinc ribbon domain-containing protein"
                     /calculated_mol_wt=26926
     Region          14..71
                     /region_name="DZR_2"
                     /note="Double zinc ribbon domain; pfam18912"
                     /db_xref="CDD:465906"
     Region          55..239
                     /region_name="PRTases_typeI"
                     /note="Phosphoribosyl transferase (PRT)-type I domain;
                     cl00309"
                     /db_xref="CDD:444823"
     Site            order(139,148,207..209,211..215)
                     /site_type="active"
                     /db_xref="CDD:206754"
ORIGIN      
        1 mrnetgggsk klicllcdsq fsqavswcsl fllkpddrvc qscrnklqii kgaicplcgr
       61 pqtahevcad ceawksridd glrlsqnrsv ylyndmmket larmkfrgda aiisafkndf
      121 ssefsavypd krlvfvpipl seerkaergf nqsqmlaecl nrpilnplir lnnekqskkk
      181 kterllsehv fetknssveg mdivliddly ttgatlhyaa rcllekgkag svssftlvrs
//
LOCUS       WP_257987522             343 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Bacillus halotolerans].
ACCESSION   WP_257987522
VERSION     WP_257987522.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 343)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 343)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025054.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13673.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         1..343
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=38793
     Region          28..129
                     /region_name="Acetyltransf_1"
                     /note="Acetyltransferase (GNAT) family; pfam00583"
                     /db_xref="CDD:395465"
     Site            order(80..82,92..93)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
     Region          153..318
                     /region_name="GrpB"
                     /note="GrpB domain, predicted nucleotidyltransferase,
                     UPF0157 family [General function prediction only];
                     COG2320"
                     /db_xref="CDD:441894"
ORIGIN      
        1 miaflqhkee avsreiidvq kpayvkeael igfdgipalh ekaedirasq erfagyredg
       61 kllgvisyek fmhelticrl vvhpdgfrkg igralvqfvi dqnedaekig vvtaeknnpa
      121 vslytqagfv ktktvkaseg lflsvfhlyp krkvevvhyn eewarlfree kdrlklvlgp
      181 eiidvhhvgs tsipnmaakp vidiliavkd iaavnqydsk maelgympkg engmigrryf
      241 qkggnkrthh vhiyegghpa ierhlvfrdy ltahpeiane yaslkkqlaa qypdnikpyi
      301 qgkndwikaa eekakrwkkg rnnangrvvc ynsenekngg ftl
//
LOCUS       WP_257987685            1201 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2339 domain-containing protein [Pseudomonas aeruginosa].
ACCESSION   WP_257987685
VERSION     WP_257987685.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021606.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10101.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1201
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..1201
                     /product="DUF2339 domain-containing protein"
                     /calculated_mol_wt=128228
     Region          1..818
                     /region_name="COG5373"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:444140"
     Region          <705..1199
                     /region_name="COG5373"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:444140"
ORIGIN      
        1 mqwifmlvgl ilggfagesl vgallgglsg lalgqavslq nlaqqnerlr kqmsefaerf
       61 ergtevihqr llrverqaqd lpesvpepaa gidqpladtp pappaevapp ldwdielpav
      121 eaapppprpp epvqpierqp afqpdaqpap rraappappr epplvergfa aakgwlfggn
      181 tvlrigvvll figlafllry aservavpve yryagvalaa mallgvgwwl rerraaygli
      241 lqgtgiavly ltifaamrlh plispgaalt llvvvticsa ilavlqnamg lavvaalggf
      301 aapiltstgs gnhvalfsyf allnagifai awfrawrpln lvgfvgtfgi gfawglrsyt
      361 pelfastepf lalfflmyvg igllfarrkl leaaqapaer gellrwsarq adyidatvlf
      421 gpplvgfglq cavighidfg mafsalalgl fymvlarvlr ghasagrtsl lveiclalgv
      481 vfgtlaiplg ldarwtsaaw avegagiywl glhqqrrlar lfalllqgga alaylngvrp
      541 gettllegsp lgalmlgaaa lfsfwqlrra pakaladwep acrpllaaag laflylvapl
      601 clavdgtaia wavaglaslf aglrlgsrtf lfcafavqll ggalfllhlq ggdgqggvfd
      661 sgwrglmtas liglaliggm llaardplvk ddsrllmgls lvllaglafv nlavlfvlpw
      721 rsasavwags glliiwlslv lrqrlsfyfg lalqvvggla fllagpslfg slsgeglrpl
      781 ahsgfwtpav lalaalvgaw rlrragerer algigtlgla elshllllwg agwwaltalc
      841 etvrfvpygl rehalllvaa atvaswmlla lrerwrelal lclalvpval lalasawrfd
      901 yqpfgefgwl awpllfathl lslrrlapll pakalsvahv lgcwlllgvl alelrylfal
      961 laeqynawrw lgwalvpsay lllvaggrsl pwplrdfpre yrllaaapva llllgwfwsa
     1021 nllsdgaaep lpylplanpl elgllivlfa lyrwsdasla slvdgnasar lgrqalagas
     1081 lfalltlavc raahhlagvp fqaealtasm lvqaglslvw tlcalgltia gtrlgrrdlw
     1141 mvgaalvgvv vvklffvelg nsgsleriis figvgvlllv vgyfsplppr raevaseaeq
     1201 p
//
LOCUS       WP_257987825             448 aa            linear   BCT 02-MAR-2025
DEFINITION  glucoamylase family protein [Bacillus sp. V33-4].
ACCESSION   WP_257987825
VERSION     WP_257987825.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. V33-4
  ORGANISM  Bacillus sp. V33-4
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021596.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10091.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Bacillus sp. V33-4"
                     /db_xref="taxon:2054169"
     Protein         1..448
                     /product="glucoamylase family protein"
                     /calculated_mol_wt=49890
     Region          14..431
                     /region_name="COG5368"
                     /note="Endo-beta-1,2-glucanase, glucoamylase superfamily
                     [Carbohydrate transport and metabolism]"
                     /db_xref="CDD:444138"
ORIGIN      
        1 mtkksyvimv vvgflissll vspaafakdn rhkefdrqle siakktyryf edftdpatgl
       61 tfdavrfqdg eknaakhtsp tnigmyllst vsaeqmgiis kkdavakiqt tlntleklpk
      121 wnglfynwyn tdgslktdwg qfisqvdngw lsaglivtge ayqeladqts vlveamnytp
      181 lydpnvgqfr ggyyvdrgel tghhygmfyt eprvasyiai gkgdvpsdhw wklyrtlpae
      241 wdwqaqiptg ptveydgvtv feghyqykgi nyvpswggsm feglmpglvl kekelgakal
      301 glnnkrhvel qiayakekgy pawgfspaat pegysefaat plgtsgyknd gtvtahatfl
      361 aleyapkeay knikalkeld tygkygfyds vnvvtgdiak aylaldqgmi masianyaqd
      421 gvirdyfhss eigskpeell kkeefsiq
//
LOCUS       WP_257987840             576 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2334 domain-containing protein [Bacillus halotolerans].
ACCESSION   WP_257987840
VERSION     WP_257987840.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021601.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10096.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         1..576
                     /product="DUF2334 domain-containing protein"
                     /calculated_mol_wt=64429
     Region          8..495
                     /region_name="YdaL"
                     /note="Predicted metal-dependent carbohydrate esterase
                     YdaL, contains NodB-like catalytic (CE4) domain [General
                     function prediction only]; COG5298"
                     /db_xref="CDD:444100"
ORIGIN      
        1 mnfkritllc vsvlmltaia sfpisaqakg edsgiliiys tldgkespqv kmldllaghf
       61 athvtvrkds dvtasdvkgk ehviyygqtk rklskklvsl isgvkkpvva igynagqisq
      121 fsglsltrke hvyqihsste kndvslesgl nvlsvsglkg kglytfksdd gktspfiwkt
      181 dksnvyiglt nllndnliva kelreafgek agtallylrl edispmsdet lllqagtyly
      241 krhvpfilsv ipvylnpetg dkvylsdkpk mvkvlkklqs mggsiivhgy thayrhsetg
      301 egfefwdaka dqpitsenad dtpsilekeq afpneqayks ylkpfqekee tytrqkltha
      361 iedltsagly plafeaphyt mseygyqmas qyfssifgqv qlsdttwkts gaspfltkpa
      421 mlhgmtlype tigfvdtskq nplgdmeehi sqmidfeggv aggfyhpylg mkylpelvdq
      481 meripdsewl dlkktqqtvk tdkveihtsg dgtvhvknnv saigeffdhh rqtplekalw
      541 ilsavvllfv vmfvsytfyl ratlkkrmfk errslg
//
LOCUS       WP_257987848             668 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein
            [Bacillus halotolerans].
ACCESSION   WP_257987848
VERSION     WP_257987848.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 668)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         1..668
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /calculated_mol_wt=74214
     Region          26..148
                     /region_name="MecA_N"
                     /note="NTF2-like N-terminal transpeptidase domain;
                     pfam05223"
                     /db_xref="CDD:428377"
     Region          141..647
                     /region_name="FtsI"
                     /note="Cell division protein FtsI, peptidoglycan
                     transpeptidase (Penicillin-binding protein 2) [Cell cycle
                     control, cell division, chromosome partitioning, Cell
                     wall/membrane/envelope biogenesis]; COG0768"
                     /db_xref="CDD:440531"
ORIGIN      
        1 mckkcilllf lcigliglig csktdspedr meafvkqwnd qqfddmyqsl tkdvkkeisk
       61 kdfvsrykti yeqagvknlk itagkvdedd kdnktmkhip ykvsmdtnag kvsfkntavl
      121 kkektddees wnidwdpsfi fkqladdktv qiasiepkrg qiydkngkgl avntdvpeig
      181 iipgelddkk ekvikelaek ldvteddinq klkqswvkdd sfvpvkkvkp deeklvsevt
      241 slkgvtrtnv ssryypygek tahltgyvra itaeelkkkk dgtysdtsni giaglenvye
      301 dklrgttgwk iyvpqtgevi aetkakdged lhltidiktq tklydelrdd sgaavalqpq
      361 tgetlalvsa psydpngfif gwsdkewkkl nedknnpfsa kfnktyapgs tikpiaaaig
      421 lkngtlkaae kktikgkqwq kdsswggysv trvsdsleqv dlehalitsd niyfaqnald
      481 mgadtftkgm ktfgfaedip fefpvqqssi andkldsdil ladtgygqgq mqmsplhlaa
      541 aytpfvdngd lvkptlikkd sqtadvwhkq vltkegaadi tkglkgvved ergsayqpvv
      601 kgitvagktg taelkkskdd kdgtengwfv gydyknkdll vammiqnvqd hggshyvvek
      661 akkqfqsk
//
LOCUS       WP_257987850             213 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Bacillus halotolerans].
ACCESSION   WP_257987850
VERSION     WP_257987850.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 213)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 213)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         1..213
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=23210
     Region          4..200
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(11,50,82,186,189)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(11,186,189)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(11,50,82)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
ORIGIN      
        1 mvlqytalgd slttgrgsgl fsagfvqrfr dmmeadlksk tavsvfaksg ldteeilgll
       61 sypyvqkqiq aadmititgc gndliesvls yqssqdetif srasahchen fekmiaqian
      121 ikgadpspya irvfnlynpf pgigiadqwi tsfnshlktl ataphvkiad vysvfkgkeq
      181 eylsfdgvhp nssgyqamae vlrgigyrel svs
//
LOCUS       WP_257987857             190 aa            linear   BCT 02-MAR-2025
DEFINITION  DeoR family transcriptional regulator [Bacillus halotolerans].
ACCESSION   WP_257987857
VERSION     WP_257987857.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019826.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08220.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         1..190
                     /product="DeoR family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=21304
     Region          1..>59
                     /region_name="GlpR"
                     /note="DNA-binding transcriptional regulator of sugar
                     metabolism, DeoR/GlpR family [Transcription, Carbohydrate
                     transport and metabolism]; COG1349"
                     /db_xref="CDD:440960"
     Region          <127..178
                     /region_name="NosL"
                     /note="cl01769"
                     /db_xref="CDD:470335"
ORIGIN      
        1 mlpinrqqhi lewlkkegal risdisqrfg vsemtvyrdv nqlvqsnqvi ktaggitlpv
       61 rapqadhmcs yclkpanqay svqlitvtqd ieqlccahca flryadktee vshlickdfl
      121 lqttvsaasa yfvvnaelnl hccqpqaipf atldhaerfq kgfggavrtf dqavedmlrd
      181 rkkhctctkk
//
LOCUS       WP_257987862             317 aa            linear   BCT 02-MAR-2025
DEFINITION  siderophore ABC transporter substrate-binding protein [Bacillus
            halotolerans].
ACCESSION   WP_257987862
VERSION     WP_257987862.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 317)
  AUTHORS   Delepelaire,P.
  TITLE     Bacterial ABC transporters of iron containing compounds
  JOURNAL   Res Microbiol 170 (8), 345-357 (2019)
   PUBMED   31678562
REFERENCE   2  (residues 1 to 317)
  AUTHORS   Kawano,H., Miyamoto,K., Sakaguchi,I., Myojin,T., Moriwaki,M.,
            Tsuchiya,T., Tanabe,T., Yamamoto,S. and Tsujibo,H.
  TITLE     Role of periplasmic binding proteins, FatB and VatD, in the
            vulnibactin utilization system of Vibrio vulnificus M2799
  JOURNAL   Microb Pathog 65, 73-81 (2013)
   PUBMED   24135791
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11468490
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         1..317
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=34667
     Region          1..315
                     /region_name="CeuA"
                     /note="ABC-type enterochelin transport system, periplasmic
                     component [Inorganic ion transport and metabolism];
                     COG4607"
                     /db_xref="CDD:443657"
ORIGIN      
        1 mkkfailfia lvtavvisac gnqsssskgs dtkkeqmtvk hqldkngtkv tknpkkvvvf
       61 dlgsldtldk lglddkvagl pkqalpkyls kfkddkyadv gslkepdfek vaeldpdlii
      121 isgrqsesyk efsniaptiy lgvdtanyme sfksdaqtig kifdkedevk delatidnsi
      181 adlkktaekq nknglvmman dgkisafgsk sryglihdvf gvtpadknik asthgqsvsy
      241 eyisktnpdy lfvidrgtai getsstkqvv endyvknvna vknnhvvyld satwylsggg
      301 lesmtqmike vkdglek
//
LOCUS       WP_257988237            5905 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Bacillus halotolerans].
ACCESSION   WP_257988237
VERSION     WP_257988237.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 5905)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 5905)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..5905
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         1..5905
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=660992
     Region          67..>599
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          <623..>663
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          680..963
                     /region_name="PS-DH"
                     /note="Polyketide synthase dehydratase; pfam14765"
                     /db_xref="CDD:434191"
     Region          1088..1453
                     /region_name="KR_2_SDR_x"
                     /note="ketoreductase (KR), subgroup 2, complex (x) SDRs;
                     cd08953"
                     /db_xref="CDD:187656"
     Site            order(1230..1231,1233,1253..1256,1280..1283,1308..1310,
                     1331..1332,1354..1355,1369,1402)
                     /site_type="other"
                     /note="putative NADP binding site [chemical binding]"
                     /db_xref="CDD:187656"
     Site            order(1332,1356,1369,1373)
                     /site_type="active"
                     /db_xref="CDD:187656"
     Region          1499..1557
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; pfam00550"
                     /db_xref="CDD:425746"
     Region          1621..>2240
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          2110..2185
                     /region_name="AcpP"
                     /note="Acyl carrier protein [Lipid transport and
                     metabolism]; COG0236"
                     /db_xref="CDD:440006"
     Region          <2281..>2318
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          2340..2630
                     /region_name="PS-DH"
                     /note="Polyketide synthase dehydratase; pfam14765"
                     /db_xref="CDD:434191"
     Region          <2740..3056
                     /region_name="KR_2_SDR_x"
                     /note="ketoreductase (KR), subgroup 2, complex (x) SDRs;
                     cd08953"
                     /db_xref="CDD:187656"
     Site            order(2832..2833,2835,2856..2859,2883..2886,2911..2913,
                     2934..2935,2957..2958,2972,3005)
                     /site_type="other"
                     /note="putative NADP binding site [chemical binding]"
                     /db_xref="CDD:187656"
     Site            order(2935,2959,2972,2976)
                     /site_type="active"
                     /db_xref="CDD:187656"
     Region          3099..3165
                     /region_name="AcpP"
                     /note="Acyl carrier protein [Lipid transport and
                     metabolism]; COG0236"
                     /db_xref="CDD:440006"
     Region          3229..>3759
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          <3802..>3834
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          3859..4154
                     /region_name="PS-DH"
                     /note="Polyketide synthase dehydratase; pfam14765"
                     /db_xref="CDD:434191"
     Region          4173..4583
                     /region_name="KR_2_SDR_x"
                     /note="ketoreductase (KR), subgroup 2, complex (x) SDRs;
                     cd08953"
                     /db_xref="CDD:187656"
     Site            order(4359..4360,4362,4383..4386,4410..4413,4438..4440,
                     4461..4462,4484..4485,4499,4532)
                     /site_type="other"
                     /note="putative NADP binding site [chemical binding]"
                     /db_xref="CDD:187656"
     Site            order(4462,4486,4499,4503)
                     /site_type="active"
                     /db_xref="CDD:187656"
     Region          4626..4681
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; pfam00550"
                     /db_xref="CDD:425746"
     Region          4746..>5293
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          <5314..>5348
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          5371..5652
                     /region_name="hot_dog"
                     /note="The hotdog fold was initially identified in the E.
                     coli FabA (beta-hydroxydecanoyl-acyl carrier protein
                     (ACP)-dehydratase) structure and subsequently in 4HBT
                     (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A
                     number of other seemingly unrelated...; cl00509"
                     /db_xref="CDD:469797"
     Region          5790..>5904
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 melkdilkal nekkitpeea kkklqefnss fdedkpnivs edsnknisnl nskiyeaens
       61 ggnfseqder iaiigisgry pdseninqfw gvlsngksai keipesrwdm seyydpeisk
      121 egsiyckwmg mledvdcfds lffeippsea emmdpqhrlf lqegyrafed agysrsalnh
      181 kkcgvylgiv ngeyniqsqq ssenssvtah snaigaaria yylnlkgpai sidtacsssl
      241 vsthlaiqal lrgeidmala ggvslyltpe syismcsagm lsadgqckaf dnsangfvpg
      301 egvgavvlkr lkdaqdagdy iygviigsai nqdgktngit apnlgsqiel vrdmydryni
      361 dpesisyaem hgtgtklgdp ielealstaf sekkdaknyc aigsvksnig htsaaaamag
      421 ihkillsmkh kklvptlhvn tpnehfdfnr spfyinretn ewntingypr rasissfgys
      481 gtnahaviee ydmsnhqagn hkkkmeissn spgifvlsak netqlniyvk nvkdyleanp
      541 eldianflyt lqigresmde rlailtsglh dlssklsifl rngangteil rggitrnkir
      601 nkvdkqdiae kevykdrsac kynvlanrwi agetvdwere yavkprripl paypfekevh
      661 wlqqrarnth qervvmnvlh pllhenvsdf seqcfrsvft gqefflkdhm vqnskifpaa
      721 amlemaraag eisggkqvss isniswvypi kvnedgqtvy irlypegdqa afelsipdes
      781 aensdeeilc aegtieyknk endqlerlni eayksscqlm ieskenyeav knnglaygpr
      841 fqtleeiayn enevlarvkl nvpsskeetk eyclhpglld galqtisifl qneqenkvyl
      901 pfslgkitih ssltetgyvy ttavkterhn dtqgrliksf ditvtddlgn isavindfnv
      961 kpiqekknsd qndkavpnel qsadqvsaly fkhvweaeka nsstslkksg aegalllfdm
     1021 nndlrkalen kindtvilvk pgvkhrvidq qtfvmnpsnt dgfevllqal rdkgiipgri
     1081 iynwpcddsi skqnqlderl ergvysmlal tqalmaqktn skiqllyvyk aamknqtpeq
     1141 gamsgffrtl qmenqlfnyk tvelkdaais isvlseillg efdiederrd vrhdgkkrwv
     1201 kkiraldkkk dmsdsalikn ngvymitggl gglgiifary lsekvkakli ltgrrkpdad
     1261 erarikelea rgsevlyika disnrqetae lvskakgrfh kidgvihaag vlkdslfwnk
     1321 tpeemsvvla akvygtrfld eilkdehldf famfsslasv fgnigqcdys yancymdhfa
     1381 enrenmriqg krygktisin wpfwisggmg idfesrkame eksgliplei eegirafedg
     1441 lclnasqlvl vkgkinqvkr fvdvlngead kvsitdslii enenisevet freeteeflr
     1501 evlsgktkid aekinvlepf eiygidsili msltrvleks fgelsktlfy eyrnlkeltd
     1561 yflnhyseki inmfgkpskt dkgsrlaeen isedsdesal kkrkrsrflt settvkkdig
     1621 diaiigvsgr ypmadnleqf wenlkngkdc iseipkdrwd yrkyfdadkq rigkayskwg
     1681 gfindvsmfd plffnippie aeqmdpqarl fmqtawqaie dagytralle kdkvgvfvgv
     1741 mygmyqlfeg evkgkrvpig ssfasianqv syfcnftgps mavdtmcsss ltalhlgces
     1801 ikngesdlvi aggvnltlhp nkhimlsmgk fassdgrcrs fgeggdgyvp gegvgavllk
     1861 plekavkdrd hiygvikgss insggktsgf tvpnpnaqgd liedvlqkan inartisyie
     1921 shgtgtalgd pievtgltks fgkqttetqf csvgsvksni ghlesasgia altkvllqme
     1981 nhqlvpsihs enlnpninfk ktpfyiqqkl eywdepvifk dgketkvprr agissfgagg
     2041 anahviveey kslhgsptvs dhtpmlfvls arneerlrey akllieylqk kngiqqkkqs
     2101 gtsgenlifd dirnkitcis anilgiketn idakieldey gfdfvqsmrl kneiekelei
     2161 ylpdsvfnlt ssihsiagyi sellpqdies gsiskgifad lpsiaytlqv greameerla
     2221 iiaknsnelv rkltlfingk nenqdqfykg nildakqkik stigektcak tvsslieine
     2281 lgkiaelwvt gkeidwnqfy keskpyrisl paypfakery wpkgmlesln srhisveemh
     2341 plvikntsnv yelrystvfn gqefflkdhv ingkkvlpgv vylemawmav esalevadqn
     2401 etvihihnvv wqrpfevtsg aaalhislep edsgeikfai ysqtdnasee tvhcqgsvli
     2461 dqdatesrvd idgimskcga skvsgesfyq lfesigisyg pshkgiesvy igedeiiael
     2521 sipkkvlvns sqytlhpsll daalqatiaf slsddkmlgt ilsdteksqe vklpfavnei
     2581 eilkdcssqm layirkdkqs kskdkmqkln idlcdlqgnv cirisqiafk tykagsekgd
     2641 flseqimfsk kwteksvtan skrgsfsrrl vilcepeekf iqdvelclqd tkcialrsna
     2701 qniadkftdy tvqllkevkk lssqmlykeq iltqlfivte senkvlagfs gflktvqlen
     2761 hnmicqlies qkecsiaelc rrleesgtdp vdqqvryten grfvselkkv evrsepricw
     2821 kdggvylitg gagglglila neiankgknv tlvlvgrssl tednrrqirk lerdgvrviy
     2881 rqadvadkqq vngliqgtve efgdingvih csgiirdhfi ikknetelrd vlapkvsgiy
     2941 nldqatkdvp ldlfiifssm aavtgnigqa dyavanafmd qfaayrnglg aegkrcghtv
     3001 sinwplwreg gmkisiemek aiqevtglip mhtatgiell yesissgesq ilalegstek
     3061 lnsylfnslp vyefdsgdlk qeeqsddqnr lkdkfavalk hllsselkld veridsrvpl
     3121 etyginstmi iqltnelekt fgvlpktlff eyqslmelae yfseaypnei iamlgikkkd
     3181 peaiplcnnp sasekqrngg rkakgwrwke knetravtem keindhhdsr eeiaiiglag
     3241 kypqadhige fwinlkngkd citeipkdrw dhsiyydkdk sksdktyakw ggfingvdef
     3301 dplffnispk daqaldpqer lflqcaynai edagytrhtl gkgkeygles nvgvfvgvmy
     3361 eeyqlygaqa qargnrytln gspasianrv syacgfhgps maidtmcsss lvsihlacqs
     3421 ilfgeceaai aggvnlslhp nkflmlgqnr fmsskgrces fgkggdgytp gegvgavilk
     3481 pkakaiadgd hiygvikgta lnhggktngy tvpnpraqas likkafkksg vnartisyie
     3541 ahgtgtslgd pieisglkka fgeqtkdkqf cligsaksni ghcesaagia gltkvllqme
     3601 nklivpslhs aelnpdidfv nspfivsqgl tewkrpmiee ngetkeypri agisafgagg
     3661 snahviveey ipessvefns dqqnnepimi tlsarkeeql keqvkqfisw nqkrlpsdae
     3721 lkniaytlqv greameerla ftvtsiseln qkltdflqgs gdyyrgkakr innvlnvlds
     3781 dkefqsvlgk wfiqgeneki lelwvkglni ewgkfysdkk frrislptyp fakesywipn
     3841 eetqsqeyel avnshhvihp lvhhntsdfn qqryssvftg retffsdhlv ngrktmpaaa
     3901 yiemvyasis nalnsdetyv iqfkdivwiq pviidhrpvq ihieldleen geiafrvfsl
     3961 sedkdsnqil yckgyaslnq nneipkvevd eirsqccler iesekiydhf ksigidyglr
     4021 qrgiefldlg esqvlahlkm sdslaetvse ytlhpcimds alqaaigiee davhmfrgqr
     4081 vstgddsatp rlpfmikklt vykgcspsmw vnlrpshnqv iendgeyldi dlfdstgnic
     4141 vkiediyfra vkkgdrnsls ekpsiaenvt pltftpkwev tniekaeasy kyskrivilc
     4201 dvnekvgsif nseckdchii tlksqsesia krftqyaldl fetvkneisc qsqdqvliqv
     4261 avsvtndryl lmglagllkt ahlenpnihg qvigikddnd agilaeklte nakysldhsv
     4321 lyengkrftl kmeecfnypa gtqtnvwkng gvylitggmg glglifarei thqvknavvv
     4381 ltgrsplted kqavlnelsn hqvkvvyrqa dvsvegsmvn llegihqdfg eingiihsag
     4441 lvmdnfiykk tkkelsavls pkvqgtinld lasremeldf fvlcsslsgi tgnvgqadya
     4501 aanafidafa ayredlvnad krkgktisin wplwkeggil ldesfekams ertgitglrt
     4561 etglklfyqs lamnqsqiia vegyaqkirs vfiesdesig nfekvkeitg nesegnfnek
     4621 ammffkqifa ealnipiqel deeqpldiyg idsifvmklt eqlektfgpl pktllfecqs
     4681 ihaithyfvn kyadqfpklt gcsaeehlpe vvksstsaeq knqgitarkn srlmpsnvkk
     4741 tetlqdiaii gmsgafaqae nlnefwdnlh dgrdcisevp lsrwdhskyf nedkdhvgta
     4801 ytkwggfmkn idcfdplffn ispadaeimd pqerlfmqsv yeaiedagyt rqalgynpgs
     4861 dvrrnvgvyv gvmsedyqly aaqeqkvgnp ivlsgnpssi anrvsyffdf hgpslavdtm
     4921 cssslvaihm acqaikhgec elavtggvnv ishpnkylli sqgkfastng rcvsfgkggd
     4981 gyvpgegvga lllkpkdkav adgdhiygvi katsinhggk tngytvpnpa aqsevirtal
     5041 eesnispdki syveahgtgt algdpieiaa ltkaygdkas niaigsvksn ighcesasgi
     5101 aaiskvllqm rnkkivpslh sselnpnidf knspffvpqe vmewkrpvae vngevkehpr
     5161 iagissfgag ganahiilee ytpeqrgskp adsqsmkpav ivlsakskdq lyisaknlld
     5221 aienqnlsen dlsdiaytlq vgreameeri afvahsretl vqklkafvmd heteseiyyg
     5281 qvygkrkfey aftsadglnk avkdcidraq ydqlcaywvn gvkfdwnnly rhrkpkrisl
     5341 ptypfereky wvklspempi engnqgegni hplihknlss lynqrfcsnf sgnefflrdh
     5401 rlgerkvlpg sailemtria gelstedqin vikdivwtnq ievksetvnt eirlypneqt
     5461 idfeisipse aeehepvict egklefresl vskareasid ieqiqarcrt idhgqdcyds
     5521 mkasglingn tfqviqeihs nesealgylk lspdmeetnk dyvlhpalln gafqtvlgli
     5581 ernvqsesvi llpfaiteir iyeslvndcv ayvtrsshaq nsqssiqkfd ikiadrsgkt
     5641 lvcvdeftlk afnmtdqesq ssmkqtndsd fktylyttew cesesqmnrd deiipqqakg
     5701 svivfdqdek lyknileqlr qdndesevil vnpgkvyrqk akhmydinpm lqddyqnllq
     5761 kleehglqpd riilyrdies saetnedlnd hleqgiysmf ylsqalikqk iktkirllft
     5821 fvnnkeevip eysaisgfsk tirmenpafl lrtveiqkad rflkegdisn arlllneldi
     5881 fdsevevrye gnirlvkgik elsil
//
LOCUS       WP_257988266             149 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6376 family protein [Bacillus halotolerans].
ACCESSION   WP_257988266
VERSION     WP_257988266.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040394.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19903.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         1..149
                     /product="DUF6376 family protein"
                     /calculated_mol_wt=15985
     Region          32..147
                     /region_name="DUF6376"
                     /note="Family of unknown function (DUF6376); pfam19903"
                     /db_xref="CDD:437735"
ORIGIN      
        1 mkkmvltvla gagllgaggc gildqvndgl dytneasayv ekvkafaeea palaeeavnd
       61 teakerletq lesiqkaaad fneltppdaa aelhntlqeh netlqksaed vlqqveegkv
      121 sleeleqsel iqntkqmtdv mgqieklge
//
LOCUS       WP_257988291             297 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidyl-prolyl cis-trans isomerase [Bacillus halotolerans].
ACCESSION   WP_257988291
VERSION     WP_257988291.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024545.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13145.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         1..297
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /GO_function="GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /calculated_mol_wt=34070
     Region          39..285
                     /region_name="prsA"
                     /note="peptidylprolyl isomerase; Provisional; PRK00059"
                     /db_xref="CDD:234605"
ORIGIN      
        1 mksrtiwtii wgallvccia vaytltksqa saspsdesia tiggksvtre ewlkemedey
       61 gkstledmin vrvveqlakk nnlkvsksei drefllikav nnsfyedeht tekewkdqir
      121 ynilleellt kdidiskaem ksfynqnkel yqfddsyrir hivvkdeeea rqvlkelegg
      181 ssfeavaaer stdrytspyg gdlgfvteas dnipssyiee aktlkqdews nepikvnngy
      241 aiiqlkekln artfsydevk nqikrqiamd qlgdkatvks lwkeadvswf ygekstk
//
LOCUS       WP_257988335              49 aa            linear   BCT 02-MAR-2025
DEFINITION  VanZ family protein [Bacillus halotolerans].
ACCESSION   WP_257988335
VERSION     WP_257988335.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 49)
  AUTHORS   Arthur,M., Depardieu,F., Molinas,C., Reynolds,P. and Courvalin,P.
  TITLE     The vanZ gene of Tn1546 from Enterococcus faecium BM4147 confers
            resistance to teicoplanin
  JOURNAL   Gene 154 (1), 87-92 (1995)
   PUBMED   7867956
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016763.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04892.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..49
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         1..49
                     /product="VanZ family protein"
                     /calculated_mol_wt=5638
     Region          <6..28
                     /region_name="VanZ"
                     /note="VanZ like family; cl01971"
                     /db_xref="CDD:470418"
ORIGIN      
        1 myvrnsyrsf dvddlilnts gaaigyllfc ilrslykklr fkndsfini
//
LOCUS       WP_257988506             571 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase [Bacillus sp. V33-4].
ACCESSION   WP_257988506
VERSION     WP_257988506.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. V33-4
  ORGANISM  Bacillus sp. V33-4
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012371.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00144.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Bacillus sp. V33-4"
                     /db_xref="taxon:2054169"
     Protein         1..571
                     /product="serine hydrolase"
                     /calculated_mol_wt=63304
     Region          69..438
                     /region_name="AmpC"
                     /note="CubicO group peptidase, beta-lactamase class C
                     family [Defense mechanisms]; COG1680"
                     /db_xref="CDD:441286"
     Region          <445..>549
                     /region_name="COG4412"
                     /note="Bacillopeptidase F, M6 metalloprotease family
                     [Posttranslational modification, protein turnover,
                     chaperones]"
                     /db_xref="CDD:443532"
ORIGIN      
        1 mknkdfmfai aavmctamli passpalade itghffktye neiekkpfkq kkhskfawdh
       61 pgksypvllp gspraagmvq epldqidaii nkkiseramp gavafvarrg hivkheaygh
      121 alryeddkft evdepiqmkt dtifdlasis kiftttaamk lyeqglfgld dpvadylpef
      181 aqngkesvti rqlmthtsgf tawiplyteg nsredriqtv lkhplknapg stytysdlnm
      241 itlgalierl sgqrldafva ehitgplgmr dtmynppaal kdriaateyq atpargivwg
      301 evhdenawsl ggvaghagvf stardlgkfa hmfvnegsyg nkrilkaetv rllaenqipq
      361 fpgndhglgw eigqgwfmda lsegttlght gytgtsivin qnndtiaill tnrvhptrnt
      421 vstngtrref arqvadaipv dirggngawf sgygdrldrt ltarvnieka atlsfntwyr
      481 ietgfdfgyv evsedgevwt qlgepttgss vdwqkvnldv pgntnfirfr yktdastngr
      541 gwyinnvkik earsktikpa ltgagwqerd y
//
LOCUS       WP_257988542              90 aa            linear   BCT 02-MAR-2025
DEFINITION  YmzC family protein [Bacillus halotolerans].
ACCESSION   WP_257988542
VERSION     WP_257988542.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025522.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14157.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         1..90
                     /product="YmzC family protein"
                     /calculated_mol_wt=10130
ORIGIN      
        1 mfseseaelr ririalvwia vfllfgacgr detvietdsg dsyetpqpss fplennhfgi
       61 vndgnieiye yneadnkvkl kktfpsdele
//
LOCUS       WP_257988549            2035 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Bacillus halotolerans].
ACCESSION   WP_257988549
VERSION     WP_257988549.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 2035)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 2035)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2035
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         1..2035
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=228003
     Region          <3..>155
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          <183..>220
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          242..524
                     /region_name="PS-DH"
                     /note="Polyketide synthase dehydratase; pfam14765"
                     /db_xref="CDD:434191"
     Region          <614..948
                     /region_name="KR_2_SDR_x"
                     /note="ketoreductase (KR), subgroup 2, complex (x) SDRs;
                     cd08953"
                     /db_xref="CDD:187656"
     Site            order(723..724,726,747..750,774..777,802..804,825..826,
                     848..849,863,896)
                     /site_type="other"
                     /note="putative NADP binding site [chemical binding]"
                     /db_xref="CDD:187656"
     Site            order(826,850,863,867)
                     /site_type="active"
                     /db_xref="CDD:187656"
     Region          987..1056
                     /region_name="AcpP"
                     /note="Acyl carrier protein [Lipid transport and
                     metabolism]; COG0236"
                     /db_xref="CDD:440006"
     Region          1117..>1645
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          <1687..>1721
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          1777..2027
                     /region_name="hot_dog"
                     /note="The hotdog fold was initially identified in the E.
                     coli FabA (beta-hydroxydecanoyl-acyl carrier protein
                     (ACP)-dehydratase) structure and subsequently in 4HBT
                     (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A
                     number of other seemingly unrelated...; cl00509"
                     /db_xref="CDD:469797"
ORIGIN      
        1 mqwenspffi nrenrkwtdk egknrlgavs sfgmsgtnah vvlqsytpes tvrekentqn
       61 dksyyllvls aktpealqgk ihemagflek sqnsgamdla kisytlmegr hhfdcrcavv
      121 ikdmedavrv lrqaegnekl pnlfkgrvpr dftaqsairk svrdlidqsy kdqenptkyr
      181 eslyalaefy clgyevscqe lfdngklkrv slptypfake eywmdypeei nplsvvqvgs
      241 ihpllhqnts dlseqryssi ftgnefflad hiikgkrtlp gvaflemvra avqlatggtd
      301 kdyeriklqn vgwvkpitit dqpvqvnigl ypknsgeiay evytetddta kgftvhsqgs
      361 avlvegtkss vldlnsikaq ctetisstqc yetfermqmq ygpghrgvee irigkgivfa
      421 kvkvpdavkd taeqyvlhps imdgifqasi gfaissgdte ietkpslpfa idelevysrc
      481 htemraiirn vqgrdnrvik ydidlcdgeg nicarikgyt srmldgsige gkpietkime
      541 iewkeapvsr qtheynrhiv fycdrenipd erqyraggis tlirsislns sddkkdsrfk
      601 tyagkvfkei kdiladrdgg svllqiivpg seegklysgm vgmlrtacqe npklsaqfie
      661 idaeennadi isiikseksn pedkhirytn rkryvaewkq vkttekaelp wkdggtylit
      721 ggagglglif akeaaqkigr gtliltgrsq endrirehlt elqkmgmnsq yrqvdvsdsk
      781 qveelissiv kqdggldgii hsagiikdny iikktqeefi evlepkvsgi vnideasadl
      841 dmdffiifss isgslgnpgq sdyaaanefm sayagyrnkl vakgqrkgkt qsvnwplwke
      901 ggmgigeeke rimerntgfi amptesgika fydcwatdse rvlcltgnid kiidgmnkqe
      961 pyitavqvna sqeeqhsgfe tkpeflkekt anylkkvlse vlklpatrie tnapmekygi
     1021 dsilvleltt klesifgtlp ktlfyeyqtl welsgyflas yreqlnrlig ievteaprie
     1081 tisipekkdk siqtrrktrf mnhqepeaek sareamdiai vgvsgkypma envqeywdnl
     1141 rdgkdcitei pkdrwdyrpy fdqnlnktgk tyskwggfid gvkhfdplff nispreaetm
     1201 dpqerlflec vyetledagy tpemlrknkd sglggdvgvy vgvmyeeyql ygaqaqsqgr
     1261 pitlsgsaas ianrvsyyfn fhgpsmavdt mcsssltsih lacqalqqgg ceaaiaggvn
     1321 vsihpnkylm lsqgkfvssn gkclsfgegg dgyvpgegig avmlkklska vedgdhiygv
     1381 iketalnhgg ktngytvpnp naqreaigka lkraginprt isyieahgtg talgdpieis
     1441 gltqafreyt ddkqfcaigs aksnighces aagiagitkv lmqmkhgeia pslhskslnp
     1501 yidfenspfe vpqylrkwkr piikengaek eyprragisa fgaggsnahv iieeyrseds
     1561 iqkipsgkhe taviilsaks seqlkerarr lhaeikqnry kdedlasiay tlqvgreame
     1621 yrmgmlvsgi qqlegnlaaf lggrtdiedf yqgyakssng dmaifanded ivkvielwgl
     1681 kgkyrklvdy wvkgfdldwe klyhntkprr vslpvypfmr eeywvtdipe sqplsnadmt
     1741 githpllhqn isdingqrfs swftgrekff kqginegdgv llegahieva riasslymnn
     1801 heftltlrdv twnkpvivne dssqiqialy eandgevewe lygendidre ghicsegkav
     1861 fmemitpeil dlnalreiys hnvfsnmada adthseftsy ieelwsteel aagetnelli
     1921 kfsdsisnen eeaknpiife paildsclha fhlysgnfcy gakavsmeea efivgsgsyi
     1981 wgvvrvnkmv gvhdtdvlem didfcdehgn llsyitglry istnqgetga dpslw
//
LOCUS       WP_257988567             550 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Bacillus
            halotolerans].
ACCESSION   WP_257988567
VERSION     WP_257988567.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 550)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         1..>550
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          5..427
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
     Region          465..>550
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
ORIGIN      
        1 mkentyglth aqrrvwftel lepgtsicnl tacvkfrgdv dldalqlaln lsisrndair
       61 fqltegiese seprlylaey kglsleiidf tnaemteteq wihdqaripf klldsplyqf
      121 yllrihphei wlyakfhhii mdgislnlmg nqiidlyqki kkgepvpdeq epsyisyiek
      181 erqylqssrf ekdhlfwtqt yqqppvyhsl tgqstsqkqs tsasrdtitl spylahtiqa
      241 fceeqkismi slfmasfyic isritsktdl aigtyygnrg skaekemlgm fvsslpirkt
      301 vdsdadflsf arsvgreqls vmrhqrfpyn llvnelrkeh kdlhnligis mqyhplqwqk
      361 addlnyetal yfsgytanel svqiqeridt gaiqlnfdyq ntlfsledik riqhhlltll
      421 enalqnphst ikeldmaekr ekekvlyefn rtkavspvas tlhglferqa altpdrtalr
      481 fsggsltyaq ldmyanrlaa rltahgitke sivgvlsers pdmltavlav lkaggayvpl
      541 dpvypeerls
//
LOCUS       WP_257988575             185 aa            linear   BCT 02-MAR-2025
DEFINITION  KR domain-containing protein, partial [Bacillus halotolerans].
ACCESSION   WP_257988575
VERSION     WP_257988575.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 185)
  AUTHORS   Bonnett,S.A., Whicher,J.R., Papireddy,K., Florova,G., Smith,J.L.
            and Reynolds,K.A.
  TITLE     Structural and stereochemical analysis of a modular polyketide
            synthase ketoreductase domain required for the generation of a
            cis-alkene
  JOURNAL   Chem Biol 20 (6), 772-783 (2013)
   PUBMED   23790488
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020243.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08659.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         <1..>185
                     /product="KR domain-containing protein"
     Region          <1..159
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(41,65,78,82)
                     /site_type="active"
                     /db_xref="CDD:187656"
ORIGIN      
        1 vqagkarfgh idgvihaagi egggsileke ieeylktlep kvqgtlalee alqgehldfi
       61 cyfssssaii gdfgncdyav gnrflmsyga yrntrhkgkt vvvnwplwes egmgfadeqs
      121 srmylkssgq rllestegte vfeailrqkh tqwlvmtgnr ervykflgls eetraktevk
      181 raalp
//
LOCUS       WP_257988618             372 aa            linear   BCT 02-MAR-2025
DEFINITION  GerAB/ArcD/ProY family transporter [Bacillus sp. V33-4].
ACCESSION   WP_257988618
VERSION     WP_257988618.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. V33-4
  ORGANISM  Bacillus sp. V33-4
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015783.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03845.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Bacillus sp. V33-4"
                     /db_xref="taxon:2054169"
     Protein         1..372
                     /product="GerAB/ArcD/ProY family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009847 - spore germination [Evidence
                     IEA]"
                     /calculated_mol_wt=42417
     Region          <87..372
                     /region_name="GerAB"
                     /note="Spore germination receptor GerABC, GerB subunit
                     (amino acid transporter) [Cell cycle control, cell
                     division, chromosome partitioning]; COG5902"
                     /db_xref="CDD:444604"
ORIGIN      
        1 mstllysdrt atfgtnwilp vvnrlqmlyf vlilpsnlvn symiwviaai gvlaqlnlvi
       61 lsrwlasdva akgfqgfvql fgerkirvfa figlflillk iivltigyve ivqqfifpsv
      121 kknwlifiif ltgcyvaskg mektirfgiv vfictfwlif ayipfffepn talhnlypli
      181 ptdspieplq gilmvwscls gpeflvclvp wltpgqkvlk yltaanmiti veylllfias
      241 slffgtnylg hvefpvvnlf rylqwpffer mdviliavhi fyfvfaislf llccygavri
      301 migrtdqptt rkgfisccim iliamltint wfwksqngln iwqtlqvllg aftflliptf
      361 llvatkvkgs ra
//
LOCUS       WP_257988660             306 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ATP-binding cassette domain-containing protein
            [Bacillus amyloliquefaciens group].
ACCESSION   WP_257988660
VERSION     WP_257988660.1
KEYWORDS    RefSeq.
SOURCE      Bacillus amyloliquefaciens group
  ORGANISM  Bacillus amyloliquefaciens group
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 306)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 306)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 306)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 306)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Bacillus amyloliquefaciens group"
                     /db_xref="taxon:1938374"
     Protein         1..306
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=34422
     Region          8..212
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            38..45
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213179"
     Site            order(41..42,44..46,84,158..159,191)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:213179"
     Site            81..84
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213179"
     Site            134..143
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213179"
     Site            154..159
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213179"
     Site            162..165
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213179"
     Site            187..193
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213179"
ORIGIN      
        1 mtepalilkd vsktinhtpi vqsisfdvrk geifgllgpn gsgkttifrm ivqlikkteg
       61 aisfrgrpds dfeyfmrhig viiegpdmyp nmtalqnlny ftklrstslr tddlmntlak
      121 vgleqaarkk vkhfslgmkq rlglaysllh npgllildep mngldpkgmk elrtilsdla
      181 kqgvsillss hllsemeeic drvayikkgr ilgiedmknr hdlgqkklft vtvdhparak
      241 eileregilq vqqkdsrvie leaeedtipy vikslaekei lisrvsartl sleekymmit
      301 dqedav
//
LOCUS       WP_257988662             307 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6895 family protein [Bacillus amyloliquefaciens].
ACCESSION   WP_257988662
VERSION     WP_257988662.1
KEYWORDS    RefSeq.
SOURCE      Bacillus amyloliquefaciens
  ORGANISM  Bacillus amyloliquefaciens
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus amyloliquefaciens group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046440.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21836.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Bacillus amyloliquefaciens"
                     /db_xref="taxon:1390"
     Protein         1..307
                     /product="DUF6895 family protein"
                     /calculated_mol_wt=35568
ORIGIN      
        1 mtqeyireik rgalswiven ihyfdmnhkv andfrwrlkt fielifltny lirnqaddke
       61 vavltefite rlrndqleef ihfdpdglag laiagefltl tdhpsrtsvv welekftaar
      121 fdcslakipf rkmdlkyslq ragvtseitd fsdlyhytaa gqdipntymt dhdaysitht
      181 ifyitdmgcs sltdkeyhlp slkekvlkfl giyiclenld itsellmcss flhidmdkdn
      241 hkplyeaawn kiyqgrmkeg nipsityqhk pglkgeqrre difkhcyhtt lvaagaahac
      301 lraernd
//
LOCUS       WP_257988779             264 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY-family carbohydrate kinase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257988779
VERSION     WP_257988779.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 264)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 264)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02782.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..264
                     /product="FGGY-family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <1..255
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 lnasvmvagg ggdnavsaig vgavspgdaf islgtsgvlf vvtdayrpap qsavhafchv
       61 lpnlwhqmsv mlsaasclqw fcrltgttev allaeiaels eedkanapff lpylsgertp
      121 hndpdargif wgmthaslra qlgyavlegv sfgindglqa lkesgtpiaq cslvgggars
      181 pfwaqlladi lampvvthkg getggalgaa rlaclaagkp iaavcekpev wqtwradpir
      241 hhtlmqryaq fkalylndlk yrqh
//
LOCUS       WP_257988790             180 aa            linear   BCT 02-MAR-2025
DEFINITION  glutamate--tRNA ligase family protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257988790
VERSION     WP_257988790.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 180)
  AUTHORS   Rath,V.L., Silvian,L.F., Beijer,B., Sproat,B.S. and Steitz,T.A.
  TITLE     How glutaminyl-tRNA synthetase selects glutamine
  JOURNAL   Structure 6 (4), 439-449 (1998)
   PUBMED   9562563
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012951.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00749.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..180
                     /product="glutamate--tRNA ligase family protein"
                     /GO_function="GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
     Region          <1..174
                     /region_name="nt_trans"
                     /note="nucleotidyl transferase superfamily; cl00015"
                     /db_xref="CDD:469580"
     Site            117..120
                     /site_type="other"
                     /note="KMSKS motif"
                     /db_xref="CDD:173905"
ORIGIN      
        1 iydghcrdlg lgaenaalrl rqtrpvlqfs drlrgtlian eplaredfii hrrdglfayn
       61 lavvvddhfq giteivrgad lieptvrqis lyqhfgwqap dylhlplaln gdgnklskqn
      121 hapalpegdp rpeivralrf lnqaipeewq alsiddllaq avanwqpaki ehsqmapael
//
LOCUS       WP_257988809             253 aa            linear   BCT 02-MAR-2025
DEFINITION  Mur ligase family protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257988809
VERSION     WP_257988809.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 253)
  AUTHORS   Bertrand,J.A., Auger,G., Fanchon,E., Martin,L., Blanot,D., van
            Heijenoort,J. and Dideberg,O.
  TITLE     Crystal structure of UDP-N-acetylmuramoyl-L-alanine:D-glutamate
            ligase from Escherichia coli
  JOURNAL   EMBO J 16 (12), 3416-3425 (1997)
   PUBMED   9218784
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08245.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>253
                     /product="Mur ligase family protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          1..>252
                     /region_name="murE"
                     /note="UDP-N-acetylmuramoylalanyl-D-glutamate--2,
                     6-diaminopimelate ligase; Provisional; PRK00139"
                     /db_xref="CDD:234660"
ORIGIN      
        1 madrnlrdll apwvpnaper ilremtldsr vaasgdlfia vqghqadgrr yipqaiaqgv
       61 aaiiaeaqge akdgeiremh gvpviylsql nerlsalagr fyhqpsqqlr lvgvtgtngk
      121 ttttqllaqw akllgetsav mgtvgnglld kvvptenttg savdvqhvls slvgqgatfg
      181 amevsshglv qhrvaalqfa asvftnlsrd hldyhgdmeh yeaakwllys thhcgqaivn
      241 addevgrrwl akl
//
LOCUS       WP_257988832             213 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY-family carbohydrate kinase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257988832
VERSION     WP_257988832.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 213)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 213)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02782.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..213
                     /product="FGGY-family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <1..213
                     /region_name="rhaB"
                     /note="rhamnulokinase; Provisional; PRK10640"
                     /db_xref="CDD:182609"
ORIGIN      
        1 alqanitneg gaesryrvlk nimglwllqr vlkeqnvsdl qgliartaal pacrfiidcn
       61 ddrfinpasm saeiqaacrd agqpvpesda elarcifdsl allyarvlne laalrghpfs
      121 qlhivgggcq ntllnqlcad acgiavvagp ieastlgnig iqlmtldela nvdefrqvvr
      181 gnaalttftp npdseiarfv aqfqpqqtke lca
//
LOCUS       WP_257988841             455 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257988841
VERSION     WP_257988841.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 455)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>455
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..>455
                     /region_name="entF"
                     /note="enterobactin non-ribosomal peptide synthetase EntF;
                     PRK10252"
                     /db_xref="CDD:236668"
ORIGIN      
        1 mttrlplvaa qpgiwmaerl stlpgawsva hyvelrgald ptllgkaiva glqqadtlsl
       61 rfeeeegevw qwlaadrtfa epsiidlrta pdphraater mqadlaqdlr vdggnplvch
      121 qllrvgddrw ywyqryhhll vdgfsfpait rqiaaiyraw qrgeatpesp ftpfagvvde
      181 yqryagseaw qrdkafwqaq rqalpapasl saaplggraa gsdiwrmkle mnadafrrla
      241 shapqcqpad lalalttlwl grlcnrmdya agfifmrrmg saaltstgpv lnvlplavhi
      301 daretladla mrlaaqlkkm rrhqrydaeq ivrdsgkaag deplfgpvln vkvfdyqldi
      361 dgvqavthtl atgpvndlel alfpdetggl sleilankar ydeaelrrhm arltallaqf
      421 aadptlrcge aemlsadela rlaavndtav plpat
//
LOCUS       WP_257988847              90 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding oxidoreductase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257988847
VERSION     WP_257988847.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 90)
  AUTHORS   Lu,G., Campbell,W.H., Schneider,G. and Lindqvist,Y.
  TITLE     Crystal structure of the FAD-containing fragment of corn nitrate
            reductase at 2.5 A resolution: relationship to other flavoprotein
            reductases
  JOURNAL   Structure 2 (9), 809-821 (1994)
   PUBMED   7812715
REFERENCE   2  (residues 1 to 90)
  AUTHORS   Hyde,G.E., Crawford,N.M. and Campbell,W.H.
  TITLE     The sequence of squash NADH:nitrate reductase and its relationship
            to the sequences of other flavoprotein oxidoreductases. A family of
            flavoprotein pyridine nucleotide cytochrome reductases
  JOURNAL   J Biol Chem 266 (35), 23542-23547 (1991)
   PUBMED   1748631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013161.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00970.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>90
                     /product="FAD-binding oxidoreductase"
     Region          4..>84
                     /region_name="FNR_like"
                     /note="Ferredoxin reductase (FNR), an FAD and NAD(P)
                     binding protein, was intially identified as a chloroplast
                     reductase activity, catalyzing the electron transfer from
                     reduced iron-sulfur protein ferredoxin to NADP+ as the
                     final step in the electron transport...; cl06868"
                     /db_xref="CDD:447143"
     Site            order(41,55..58,71..73,78..81)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99810"
     Site            order(55,57..58)
                     /site_type="other"
                     /note="conserved FAD binding motif [chemical binding]"
                     /db_xref="CDD:99810"
ORIGIN      
        1 mttfhslkva rvepetrdav titfaipqal qaeycfrpgq hltlkarlgg eelrrcysic
       61 hsrtpgeisv avkaidggrf sryaqqdiqq
//
LOCUS       WP_257988924             188 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257988924
VERSION     WP_257988924.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 188)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 188)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>188
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          1..>187
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 eqgepvgpgi lwsdtrshel msdllrrpgf drryfadtgt hlqpcntslq lywlkqyqpa
       61 rlaaarylff akdwirfrlt gvaaleltda sssllnqqtg swssvvmnem glnellplfp
      121 pllapdapag tlsdavaalt glpaatpvaa galdvcsaal gcgavnegdi ytilgttcct
      181 givcrgpa
//
LOCUS       WP_257989145             294 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleotidyltransferase-like protein [Bacillus amyloliquefaciens].
ACCESSION   WP_257989145
VERSION     WP_257989145.1
KEYWORDS    RefSeq.
SOURCE      Bacillus amyloliquefaciens
  ORGANISM  Bacillus amyloliquefaciens
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus amyloliquefaciens group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025893.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14540.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Bacillus amyloliquefaciens"
                     /db_xref="taxon:1390"
     Protein         1..294
                     /product="nucleotidyltransferase-like protein"
                     /calculated_mol_wt=34390
     Region          1..118
                     /region_name="NTF-like"
                     /note="Nucleotidyltransferase-like; pfam14540"
                     /db_xref="CDD:434028"
     Region          224..286
                     /region_name="HTH_52"
                     /note="Helix-turn-helix domain; pfam18576"
                     /db_xref="CDD:436590"
ORIGIN      
        1 mdnllrpiyq erashpdtla vlmierrska ssitdnfdav mlvivkqade plfikhyefe
       61 qktaslhivt dallqewill gtnrrvidwi ingkvlfdrn eyiselndrl stfpfaerkl
      121 kigmeygkli rrfvegkaff eadhfldayy avvhalhhla rievidrgfy pettvwnqvr
      181 hiepqvykly sklveshesl ekrlellfla ndflihskae igsahlfqvm kekemwqfge
      241 llqhpellhf tqdlgvmldy ltekgfvevs qietkgqevy hrgysfkksv daes
//
LOCUS       WP_257988951             368 aa            linear   BCT 02-MAR-2025
DEFINITION  GAF domain-containing sensor histidine kinase [Bacillus
            amyloliquefaciens].
ACCESSION   WP_257988951
VERSION     WP_257988951.1
KEYWORDS    RefSeq.
SOURCE      Bacillus amyloliquefaciens
  ORGANISM  Bacillus amyloliquefaciens
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus amyloliquefaciens group.
REFERENCE   1  (residues 1 to 368)
  AUTHORS   Ortet,P., Whitworth,D.E., Santaella,C., Achouak,W. and Barakat,M.
  TITLE     P2CS: updates of the prokaryotic two-component systems database
  JOURNAL   Nucleic Acids Res 43 (Database issue), D536-D541 (2015)
   PUBMED   25324303
REFERENCE   2  (residues 1 to 368)
  AUTHORS   Heikaus,C.C., Pandit,J. and Klevit,R.E.
  TITLE     Cyclic nucleotide binding GAF domains from phosphodiesterases:
            structural and mechanistic insights
  JOURNAL   Structure 17 (12), 1551-1557 (2009)
   PUBMED   20004158
REFERENCE   3  (residues 1 to 368)
  AUTHORS   Ho,Y.S., Burden,L.M. and Hurley,J.H.
  TITLE     Structure of the GAF domain, a ubiquitous signaling motif and a new
            class of cyclic GMP receptor
  JOURNAL   EMBO J 19 (20), 5288-5299 (2000)
   PUBMED   11032796
  REMARK    Erratum:[EMBO J 2001 Mar 15;20(6):1483]
REFERENCE   4  (residues 1 to 368)
  AUTHORS   Dutta,R. and Inouye,M.
  TITLE     GHKL, an emergent ATPase/kinase superfamily
  JOURNAL   Trends Biochem Sci 25 (1), 24-28 (2000)
   PUBMED   10637609
REFERENCE   5  (residues 1 to 368)
  AUTHORS   Stock,A.M., Robinson,V.L. and Goudreau,P.N.
  TITLE     Two-component signal transduction
  JOURNAL   Annu Rev Biochem 69, 183-215 (2000)
   PUBMED   10966457
REFERENCE   6  (residues 1 to 368)
  AUTHORS   Stock,J.
  TITLE     Signal transduction: Gyrating protein kinases
  JOURNAL   Curr Biol 9 (10), R364-R367 (1999)
   PUBMED   10339418
REFERENCE   7  (residues 1 to 368)
  AUTHORS   Aravind,L. and Ponting,C.P.
  TITLE     The GAF domain: an evolutionary link between diverse
            phototransducing proteins
  JOURNAL   Trends Biochem Sci 22 (12), 458-459 (1997)
   PUBMED   9433123
REFERENCE   8  (residues 1 to 368)
  AUTHORS   Alex,L.A. and Simon,M.I.
  TITLE     Protein histidine kinases and signal transduction in prokaryotes
            and eukaryotes
  JOURNAL   Trends Genet 10 (4), 133-138 (1994)
   PUBMED   8029829
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 12128685
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Bacillus amyloliquefaciens"
                     /db_xref="taxon:1390"
     Protein         1..368
                     /product="GAF domain-containing sensor histidine kinase"
                     /EC_number="2.7.13.3"
                     /GO_function="GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=40294
     Region          23..167
                     /region_name="GAF_2"
                     /note="GAF domain; pfam13185"
                     /db_xref="CDD:433019"
     Region          167..364
                     /region_name="ComP"
                     /note="Signal transduction histidine kinase ComP [Signal
                     transduction mechanisms]; COG4585"
                     /db_xref="CDD:443642"
ORIGIN      
        1 mtkttvetlk tlkaiaetln qnhdlkeald kvlrellslt glrtgwifli epdgsytlaa
       61 saylppalgq renalmcsge cycltkfsng gltkavnimn ckriefaeqt tncrdtegit
      121 hhatvpledg grkfgllnva asektffnee elhlleavaf qigtaiqrmk laefeqqnal
      181 lmersrlaqe lhdsvnqmlf svsltakaak sftdddrlrq mipfiqelsq daltemrali
      241 wqlkpesltk glyasiksya aligleavce tedeleltde qehalwriaq ealnnckkha
      301 gtdrviisav kkpgcaelhi sdrgagfssd ahavlpslgv agmkaraeai ggrftlqsel
      361 gagtncdc
//
LOCUS       WP_257989154             168 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding enzyme, partial [Bacillus amyloliquefaciens].
ACCESSION   WP_257989154
VERSION     WP_257989154.1
KEYWORDS    RefSeq.
SOURCE      Bacillus amyloliquefaciens
  ORGANISM  Bacillus amyloliquefaciens
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus amyloliquefaciens group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024591.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13193.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Bacillus amyloliquefaciens"
                     /db_xref="taxon:1390"
     Protein         <1..>168
                     /product="AMP-binding enzyme"
     Region          <1..166
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
ORIGIN      
        1 yilgdgdqvq pegiagelcv agrglargyl nreeetakrf tadpfvpger myrtgdlvkw
       61 naqcgieyig ridqqvkvrg yrielseiev rlarladvhd aavtavedka gntalcayva
      121 pqqddietlk aalkdtlpdy mvpafwvemd elpvtangki dkkalpep
//
LOCUS       WP_257989147              90 aa            linear   BCT 02-MAR-2025
DEFINITION  contact-dependent growth inhibition system immunity protein,
            partial [Bacillus amyloliquefaciens].
ACCESSION   WP_257989147
VERSION     WP_257989147.1
KEYWORDS    RefSeq.
SOURCE      Bacillus amyloliquefaciens
  ORGANISM  Bacillus amyloliquefaciens
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus amyloliquefaciens group.
REFERENCE   1  (residues 1 to 90)
  AUTHORS   Batot,G., Michalska,K., Ekberg,G., Irimpan,E.M., Joachimiak,G.,
            Jedrzejczak,R., Babnigg,G., Hayes,C.S., Joachimiak,A. and
            Goulding,C.W.
  TITLE     The CDI toxin of Yersinia kristensenii is a novel bacterial member
            of the RNase A superfamily
  JOURNAL   Nucleic Acids Res 45 (9), 5013-5025 (2017)
   PUBMED   28398546
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036906.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18593.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Bacillus amyloliquefaciens"
                     /db_xref="taxon:1390"
     Protein         1..>90
                     /product="contact-dependent growth inhibition system
                     immunity protein"
     Region          13..90
                     /region_name="CdiI_Ykris-like"
                     /note="inhibitor (or immunity protein) of the
                     contact-dependent growth inhibition (CDI) system of
                     Yersinia kristensenii, and similar proteins; cl39912"
                     /db_xref="CDD:454447"
ORIGIN      
        1 mieikvsdpv frflgghfhq giespanald kylneasqkl kerdlialte fvnsdyseen
       61 knefieeaad giyfpeddpe dditplewlk
//
LOCUS       WP_257989161              97 aa            linear   BCT 02-MAR-2025
DEFINITION  IS3 family transposase, partial [Bacillus amyloliquefaciens].
ACCESSION   WP_257989161
VERSION     WP_257989161.1
KEYWORDS    RefSeq.
SOURCE      Bacillus amyloliquefaciens
  ORGANISM  Bacillus amyloliquefaciens
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus amyloliquefaciens group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024729.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13333.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Bacillus amyloliquefaciens"
                     /db_xref="taxon:1390"
     Protein         <1..97
                     /product="IS3 family transposase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <1..94
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 lhsdqgsvyt syeyqkavkt kgitmsmsrk gtpadnasie sfhsslkset fylnsidrtt
       61 ttivertaie yihyynniri qtklnsqspi qyrqlav
//
LOCUS       WP_257989228             690 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA-binding protein [Pseudomonas aeruginosa].
ACCESSION   WP_257989228
VERSION     WP_257989228.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 690)
  AUTHORS   Ilangovan,U., Wojciak,J.M., Connolly,K.M. and Clubb,R.T.
  TITLE     NMR structure and functional studies of the Mu repressor
            DNA-binding domain
  JOURNAL   Biochemistry 38 (26), 8367-8376 (1999)
   PUBMED   10387082
REFERENCE   2  (residues 1 to 690)
  AUTHORS   Harshey,R.M., Getzoff,E.D., Baldwin,D.L., Miller,J.L. and
            Chaconas,G.
  TITLE     Primary structure of phage mu transposase: homology to mu repressor
  JOURNAL   Proc Natl Acad Sci U S A 82 (22), 7676-7680 (1985)
   PUBMED   2999776
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014380.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02316.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..690
                     /product="DNA-binding protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=77540
     Region          9..126
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Region          <218..467
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
     Region          480..540
                     /region_name="Mu-transpos_C"
                     /note="Mu transposase, C-terminal; pfam09299"
                     /db_xref="CDD:430512"
ORIGIN      
        1 msewfsaqkl aglpglpgtv qginsratrd swqqrkhmgr gggreyhiss lpeetraall
       61 naalgevatk vvrqetqlal vetnrqqlva darqgvlhal dlmmartgys rkrsitlmld
      121 marlgqvepq llamlkmard prgrpsadgl psvrslerfl dqaergalvp kvrrpdmsvp
      181 dwapafmtiy qgpekrsara ahallekhwq gqmpsldqvy aflrkvgnvs revgrmgehe
      241 ikalrpfirr dftkllptdv yscdghtfda evqhpmhgrp frpeittiid irtrripgws
      301 tglaesalvv vdalrdactk ggvpaifyvd ngsgyvnhmm rdeavglmgr lgidmknslp
      361 ynsqargvie rvhqslwira akelpgyiga dmdrqaklat fkltrraiak ggtmplmswe
      421 sfvafceqqi aeyndrphss lprivdpntg rrrhmtpnea walheaegfs pmrvtddear
      481 plfrpqvlrt vrrcelefig nryfarelee fhgdqvavgy dihdaskvwv ydgegrflct
      541 aelngnsrdy mpasyverar ekraearekr alahldeira erdggyalem daplsipglg
      601 titpeqlrsr saatlevqae rideprpaaa atqattaqvf tlptapaqry rqwcelaerq
      661 rsglpiepda aqwfevypks kefaaqqrqa
//
LOCUS       WP_257989288              67 aa            linear   BCT 02-MAR-2025
DEFINITION  NETI motif-containing protein [Bacillus infantis].
ACCESSION   WP_257989288
VERSION     WP_257989288.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025410.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14044.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..67
                     /product="NETI motif-containing protein"
                     /calculated_mol_wt=7600
     Region          9..64
                     /region_name="NETI"
                     /note="NETI protein; pfam14044"
                     /db_xref="CDD:433669"
ORIGIN      
        1 mskekkkkqf evlenetigq cldriakegy vpvrrtekpi fkevktggsv syepagrqii
       61 feakkee
//
LOCUS       WP_257988764             449 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DNA sulfur modification protein DndB [Bacillus
            amyloliquefaciens group].
ACCESSION   WP_257988764
VERSION     WP_257988764.1
KEYWORDS    RefSeq.
SOURCE      Bacillus amyloliquefaciens group
  ORGANISM  Bacillus amyloliquefaciens group
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 449)
  AUTHORS   Liang,J., Wang,Z., He,X., Li,J., Zhou,X. and Deng,Z.
  TITLE     DNA modification by sulfur: analysis of the sequence recognition
            specificity surrounding the modification sites
  JOURNAL   Nucleic Acids Res 35 (9), 2944-2954 (2007)
   PUBMED   17439960
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025438.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14072.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Bacillus amyloliquefaciens group"
                     /db_xref="taxon:1938374"
     Protein         1..449
                     /product="DNA sulfur modification protein DndB"
                     /calculated_mol_wt=51542
     Region          170..422
                     /region_name="ParB_N_Srx"
                     /note="ParB N-terminal domain and sulfiredoxin
                     protein-related families; cl28891"
                     /db_xref="CDD:452888"
ORIGIN      
        1 msevllttdk lyklkteiek nlidiksdsn mvkelkatma dkykalpgyi qeilnnndnn
       61 vqrlnekevy ivskemysil gapaldpsny fptrlakele ggrvfageev vklpykfknv
      121 ikikednyvt sitakelsel ynssilqyny ntqregkyik gslipvpktn pksvdeikel
      181 fikgdlivsm ltfnarlgts dgdeeveydp sdqsltvtrg tlldaldgyh risgivkaia
      241 evpeldqpfi lnvlnydeek akvhfaqmnt inpveksrie elgqkrysst vveqlkfkse
      301 lknkispqse igidsnflvt yytlseaidd afelksrkda lkiakylvdf fdnlfyafpd
      361 efleddlssi rkqsyinhnv mfygyvylak kmkennveln klenilntid fsksgrvfee
      421 lgrqnnenql knimkkklkr mfydeiavv
//
LOCUS       WP_257989323             152 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Bacillus infantis].
ACCESSION   WP_257989323
VERSION     WP_257989323.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..152
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=16613
     Region          3..135
                     /region_name="NUDIX_ADPRase"
                     /note="ADP-ribose pyrophosphatase and similar proteins;
                     cd18880"
                     /db_xref="CDD:467591"
ORIGIN      
        1 mirtaskaii ikddcllaik mydsgedfyv lpgggqenge nlhanlqrec leevgvpvei
       61 gsllfvrdyi gsnhgyedhs glhqvefffa csiqaevspk sgsipdknqv giewlplkel
      121 adcplfpapi reliirhadg etglpvymgd vn
//
LOCUS       WP_257989325             412 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Bacillus infantis].
ACCESSION   WP_257989325
VERSION     WP_257989325.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..412
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44825
     Region          13..393
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(14..15,18..19,22,55,105..106,108..110,113,133,
                     136..137,140,221,224..225,228..230,233,261,265,321..322,
                     326,330,346,349..350,353..354,357)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 meakkvyfrl tgiraflfqi iftvnaiyfv veaglnplql vligtimels ivlfevptgv
       61 iadhvsrkks viigtillgl ahllegsvpa fwgiatayav wglgytflsg aeeawiadev
      121 egkgldklfl kgsqiasigk iagiiasvii smlfsvqtai liaggsfiil avwlwfrmpe
      181 hrfekleree tsqlrqlaga vqkgyrtvkg npvlagmagi almwglaseg fdrlwaahfl
      241 edihlaessa vlwfglingi alllniwlve wisrrlngdg eqtyvrlllf vnvalaastl
      301 ifalsgelwl alasywtsft lrglnsplys iwlnqklesk gratmlslfg qidaigqiag
      361 gplvgwiafs fsisaglfat glftvpvlif lwiagryass rvsessgqed tg
//
LOCUS       WP_257989428              42 aa            linear   BCT 02-MAR-2025
DEFINITION  YrzO family protein [Bacillus infantis].
ACCESSION   WP_257989428
VERSION     WP_257989428.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025507.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14142.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..42
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..42
                     /product="YrzO family protein"
                     /calculated_mol_wt=4809
ORIGIN      
        1 miifivlaaf itlfsievnl rktvkqnqem iellkemkkg ee
//
LOCUS       WP_257989472             777 aa            linear   BCT 02-MAR-2025
DEFINITION  S-type pyocin domain-containing protein [Pseudomonas aeruginosa].
ACCESSION   WP_257989472
VERSION     WP_257989472.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 777)
  AUTHORS   Michel-Briand,Y. and Baysse,C.
  TITLE     The pyocins of Pseudomonas aeruginosa
  JOURNAL   Biochimie 84 (5-6), 499-510 (2002)
   PUBMED   12423794
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018642.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06958.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..777
                     /product="S-type pyocin domain-containing protein"
                     /calculated_mol_wt=83931
     Region          <124..>317
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          <234..311
                     /region_name="MAP7"
                     /note="MAP7 (E-MAP-115) family; pfam05672"
                     /db_xref="CDD:461709"
     Region          306..>429
                     /region_name="Enamelin"
                     /note="pfam15362"
                     /db_xref="CDD:464672"
     Region          502..636
                     /region_name="Pyocin_S"
                     /note="S-type Pyocin; pfam06958"
                     /db_xref="CDD:399737"
     Region          709..767
                     /region_name="HNHc"
                     /note="HNH nucleases; HNH endonuclease signature which is
                     found in viral, prokaryotic, and eukaryotic proteins. The
                     alignment includes members of the large group of homing
                     endonucleases, yeast intron 1 protein, MutS, as well as
                     bacterial colicins, pyocins, and...; cd00085"
                     /db_xref="CDD:238038"
     Site            order(736,738..740,742,754..755,759..760,763,767)
                     /site_type="active"
                     /db_xref="CDD:238038"
ORIGIN      
        1 msdvfdlgsm ttvatatgqy sfytpppptp ipyltyiarp ginkfdlpeg akikdlikry
       61 qyersqvpaa imirgvqeei kkstntalan vgsivdgela ylasqkkekl nptgatplqm
      121 ataekaaave llaskqkela dartianaff gydpltvnyv nvmneiygrr edkdfsfdnw
      181 sksysaaqki rlieaeisvl nsrssaldgk vaeltrlqrl edaqraaeaa rqteaerlaq
      241 eqrqaearrq aeearrqaea qqqaelqrla eaeakrvaea ekkrqdeina rlqaivvses
      301 eakrieeiyk rleeqdkisn ptvttppavd agsrvddalt htgtrvtsgg etgatggsgr
      361 dvdtgtgqgg itarpvdvss vsipdrrdpk ipdqprrdlg alvptfpdfp tfpsfpgvgv
      421 pvapkplapa gggaasvsrt lktavdllsv arkppgamlg qvaaviatma vssfwpklnn
      481 gerqasfaip vaelspplav dwqaiaaakg tvdlpyrlkt lnvdgsiqii avptepgsaa
      541 vpvraltlds asgtykyttt gpgggtilvt pdtppgqids ssstpavphg plimpgtlli
      601 pkepqiesyp eleqrefndg iyvypedsgi pplyivyrdp rdepgvatgn gqpvtgnwla
      661 gasqgngvpi psqiadqlrg kefkswrdfr eqfwmavskd psvlenlsps nryfvsqgla
      721 pyavpeehlg skekfeihhv vplesggaly ntdnlvivtp krhseihkel kfkrkek
//
LOCUS       WP_257989575             313 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Bacillus infantis].
ACCESSION   WP_257989575
VERSION     WP_257989575.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 313)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 313)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..313
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=35029
     Region          3..303
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(8,10..11,13,32..34,75..77,107..109,128,132,155..158)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187540"
ORIGIN      
        1 mktalvlgaa ggmgysltea llnkgfhvia asrsldnlek lrripgmlpd ilacdamdrt
       61 evkkavsqad lvlhsinipy qewgslpiim tnileecriq nkpfiytdni yaygrqaspv
      121 kesavknpht kkgkirlell eqirksgtry liahfpdfyg pdtsntlldy tlkqavaknk
      181 agflgktnle refiyikdaa ealaelalhe eaygedwnip gsgtitgkei eavlagyfnr
      241 qirlwpisrw miqsiglfdp fmreyaemmy lnetpvildg skyekligpi prtpysegit
      301 atlrqlesqp aar
//
LOCUS       WP_257989634             262 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257989634
VERSION     WP_257989634.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..262
                     /product="ABC transporter substrate-binding protein"
     Region          <4..247
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 fqvikgnkdl alhavealnv gylafntekk pfdnvlvrqa lnyatdkqai vkavfldsgs
       61 vakspipstm lgykkdlpdy dydpqkakal lkqagleqga evtlwsmpvq rpynpnskri
      121 aemiqndwak vgvkakivsy ewgeylagmr kgehdsalyg wmsdngdpdn fagtllscdn
      181 iqtgsnaarw cdksydalvk kallvsdpqa raklyeqaqe ifyqqapwit latgktfyat
      241 rsnvsgytvs mmgsdfskak ln
//
LOCUS       WP_257989676             561 aa            linear   BCT 02-MAR-2025
DEFINITION  GmrSD restriction endonuclease domain-containing protein [Bacillus
            infantis].
ACCESSION   WP_257989676
VERSION     WP_257989676.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 561)
  AUTHORS   Gao,H., Gong,X., Zhou,J., Zhang,Y., Duan,J., Wei,Y., Chen,L.,
            Deng,Z., Wang,J., Chen,S., Wu,G. and Wang,L.
  TITLE     Nicking mechanism underlying the DNA phosphorothioate-sensing
            antiphage defense by SspE
  JOURNAL   Nat Commun 13 (1), 6773 (2022)
   PUBMED   36351933
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 561)
  AUTHORS   Picton,D.M., Luyten,Y.A., Morgan,R.D., Nelson,A., Smith,D.L.,
            Dryden,D.T.F., Hinton,J.C.D. and Blower,T.R.
  TITLE     The phage defence island of a multidrug resistant plasmid uses both
            BREX and type IV restriction for complementary protection from
            viruses
  JOURNAL   Nucleic Acids Res 49 (19), 11257-11273 (2021)
   PUBMED   34657954
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015210.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03235.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..561
                     /product="GmrSD restriction endonuclease domain-containing
                     protein"
                     /calculated_mol_wt=64620
     Region          4..528
                     /region_name="COG3472"
                     /note="Uncharacterized conserved protein domain, often
                     C-terminal to DUF262 [Function unknown]"
                     /db_xref="CDD:442695"
ORIGIN      
        1 mgnyepkpev erievlvrlv keghiklpkf qrpfvwakrn ilelmdsiyk gypigsillw
       61 ltrqklaser niadleinel eeeyptnyll dgqqrlsslc gilfwdgknk ksvwnvvfdl
      121 ekeeflydpd nerieyfkln klldtmdfin qcsrfaghpk qvqytknaqk llnsikdyki
      181 asvkigdmsl devapiferi nstgrrltmv dlmraatwsg efdlsdtisl vrgvleeknf
      241 etvpeieilr nlstcaglgv tredmnklrn fsseelkvta ekckkaymha vdflttdlqv
      301 tshgylpysl qltflvelfn lcplptldqr ieikkwfwrt sitryfasfn taqlnaelrt
      361 irnfaagkis tipinkginf kefiespfvl rnalsktltl ilasnspksl ldgasinids
      421 vlaivnknef hhifpkdylk krnydnsqin qhanicmlnl gnnraisnka psayfltikn
      481 rlgsnvhdil lsnfidnnay icalkddyeg fiaarkrlil qramelceff eevtivpeea
      541 ppvinknrke slvyeqmnle l
//
LOCUS       WP_257989733             289 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257989733
VERSION     WP_257989733.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 289)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..289
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          <1..262
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 pqpvvdpeir nrcwddkkvd ahhaiiptar ssqvkltdne akvytliarq ylmqfcpdav
       61 frkcqidlei angkfvakar flaeagwrtl lgskerdeen dgtplpvvak gdellcerge
      121 vverqtqppr hftdatllsa mtgiarfvqd kdlkkilrat dglgteatra giiellfkrg
      181 flskkgryih sseagralih slpemagrpd mtahwesvlt qisekqcryq dfmqplvgtl
      241 yqlidqarst pvrqfrglva pggakksfsk gkgkpkgkka addtapppq
//
LOCUS       WP_257989744             218 aa            linear   BCT 02-MAR-2025
DEFINITION  Type 1 glutamine amidotransferase-like domain-containing protein
            [Bacillus infantis].
ACCESSION   WP_257989744
VERSION     WP_257989744.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 218)
  AUTHORS   Hakansson,K., Wang,A.H. and Miller,C.G.
  TITLE     The structure of aspartyl dipeptidase reveals a unique fold with a
            Ser-His-Glu catalytic triad
  JOURNAL   Proc Natl Acad Sci U S A 97 (26), 14097-14102 (2000)
   PUBMED   11106384
REFERENCE   2  (residues 1 to 218)
  AUTHORS   Lassy,R.A. and Miller,C.G.
  TITLE     Peptidase E, a peptidase specific for N-terminal aspartic
            dipeptides, is a serine hydrolase
  JOURNAL   J Bacteriol 182 (9), 2536-2543 (2000)
   PUBMED   10762256
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015534.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03575.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..218
                     /product="Type 1 glutamine amidotransferase-like
                     domain-containing protein"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=24370
     Region          8..206
                     /region_name="GAT_1"
                     /note="Type 1 glutamine amidotransferase (GATase1)-like
                     domain; cl00020"
                     /db_xref="CDD:469582"
     Site            119
                     /site_type="active"
                     /note="conserved cys residue [active]"
                     /db_xref="CDD:153223"
ORIGIN      
        1 mkthyylgwf nnhfpenlsk vllediidrk slvmissnps iyeeigaaer swldqagimf
       61 eenhlinhcv akeeahslik nasvifllgg ntveqnrfla eyelsdpikk sralvmgasa
      121 gainmsakwl csknlgynve dstlydgigl ddfsvlshfd lehnlalvqs elsplseetn
      181 iyasnkdcav rvkgdkidil gtvylisrsr ierldetl
//
LOCUS       WP_257989753              87 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257989753
VERSION     WP_257989753.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 87)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..87
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <1..71
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mtvnnieaai rlsaagmgia yvpdfvvrea mdegqlqevl pgccikdghf svlwpasryl
       61 sprircfidf maaaeiplsp asasptt
//
LOCUS       WP_257989754             482 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein [Pseudomonas aeruginosa].
ACCESSION   WP_257989754
VERSION     WP_257989754.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 482)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..482
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=51165
     Region          22..477
                     /region_name="ALDH_PsfA-ACA09737"
                     /note="Pseudomonas putida aldehyde dehydrogenase PsfA
                     (ACA09737)-like; cd07120"
                     /db_xref="CDD:143438"
     Site            order(145..149,157,172,174..175,224..227,230,233..234,
                     248..250,282,383,385,411,449)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143438"
     Site            order(149,248,279,282)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143438"
ORIGIN      
        1 mngharhwid gawldsaqrg qsfdpasgqp igtyadggra eadaaiaaav rafedgpwkd
       61 dhalratale eiaaaferha dalidllale ngkikpeaaf evgmvpgklr yyaglarser
      121 gasgtprpdv vslvlrepmg vagiivpwns pvvlmirsla palaagtttv vkmpgqtaqt
      181 namvariiae apslpagavn ifsesgsega rrlidaaevp visftgssat graisaagar
      241 hlkrfglelg gktphlvfdd adldaalpvl eksltvfagq fcmtgsrllv qrgvaerlre
      301 rlaqrlenlr vgpaadprsd mgplidkanv erveravrqa iaagarvvvr ggpategela
      361 agafyrptll evddpdldiv qqetfgpvlt lqvfeheeeg valanrseyg laagvwtrdv
      421 arafrvarki ragtvwindw akvydefeeg gyrqsglgrl ngvaalddfv eykhislttg
      481 aa
//
LOCUS       WP_257989759            1494 aa            linear   BCT 02-MAR-2025
DEFINITION  S-layer homology domain-containing protein [Bacillus infantis].
ACCESSION   WP_257989759
VERSION     WP_257989759.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 1494)
  AUTHORS   Mesnage,S., Fontaine,T., Mignot,T., Delepierre,M., Mock,M. and
            Fouet,A.
  TITLE     Bacterial SLH domain proteins are non-covalently anchored to the
            cell surface via a conserved mechanism involving wall
            polysaccharide pyruvylation
  JOURNAL   EMBO J 19 (17), 4473-4484 (2000)
   PUBMED   10970841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012613.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00395.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1494
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..1494
                     /product="S-layer homology domain-containing protein"
                     /calculated_mol_wt=161439
     Region          296..387
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
     Region          <461..533
                     /region_name="tand_rpt_95"
                     /note="tandem-95 repeat; NF012211"
                     /db_xref="CDD:333740"
     Region          518..608
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
     Region          740..828
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
     Region          856..928
                     /region_name="DUF5011"
                     /note="Domain of unknown function (DUF5011); pfam16403"
                     /db_xref="CDD:435320"
     Region          943..1022
                     /region_name="Cadherin-like"
                     /note="Cadherin-like beta sandwich domain; pfam12733"
                     /db_xref="CDD:403821"
     Region          <1285..1304
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          1324..1364
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          1398..1439
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
ORIGIN      
        1 mikkklvayl viimvllsmi pqnpveatei nitpdtwafy ndssnceesn pcessdwefs
       61 lldstgaida earlksdttn glnlrggvya svkskkgtfk lagfqfgyps ypynpntkft
      121 ieaykdgilv adanhstsgp ggtsnfwppp aeaadwqnid evriryqess dkllinliav
      181 qvsdpvvpap ptpsnppavt saaamedtkt nsglkitsde snvthykieh itggtlyknd
      241 gateiadgsf itkeegeael rflpdtnent paggifsidv raaqdntgkg lseaetvtie
      301 vtevndapia nddtltsviq nsgeriisis dllsndeagp nernqslavk evkdstggtv
      361 rmegsniift pnpnvsgpgs fkyviqddgt tngadapltd eglvsftiep radmpavtns
      421 etdedvqtan glvitssfsd kavtthykis gisggrlykn dgttvinegs fiteaegrag
      481 lkftpaenay gsdgfgfyvq aapgtddnrl snpvpaaitv levndapaas ndtiqnlyed
      541 aeaksipidh llsndskgas neagqkldiv svdeavggtv qivgssiift pqpnyygnag
      601 frykvkdngt tnghadpksd tatvgfqiep qadvpgitst aisednfnqd glvitknadd
      661 gseithfrls ditggtlykn dcttvinngs yitlsegeag lkfkpdsnef gnaefsfkaq
      721 aaigtddtkl sdsvpgvmiv tevndeptaa ddnlsdipfg tekvmipfnk liandlkgpa
      781 nesgqsltvt dvmaitggtv sivggqiqfv pdtdflgtas ftytitdngt tngmddhkts
      841 tgkaefniyd adapiialhg dnplyllvde lyfepgfaad dtvdgdltnq vavtgivttd
      901 qlgvynlkyn vkdsnnnaal eetreirvvs nelktlepss gdltplfdpk ennfsmkvtn
      961 nvasldltai pldptatlti nglavdhnpk tiplkvgent viivvtsqgg ftktytveik
     1021 rafnsgdssn spkteiitvd vdgengenln ktpikrttes ngtvrddvtm peniaketve
     1081 kakvsgndta riiipdekdi vtetnvdipr kslgelksgn lnleiftena tvsipkasli
     1141 nfsedlyfrf ipikkeaeql evierakkek vvrealgeat ievvgrpmti etnlqsrkvd
     1201 limpllgvtl psdpeklqdf lntlgifieh sdgekvlikp epveykeglq glkftiekfs
     1261 tftivsmdnl deyfnsqdkt hspyikgykd gtfrpeafvs raemaamlar nlpadaslak
     1321 vtdyqdiapa ywgykeimka kqagimiglt qngfhpgeav traqiatiay rwmkqeckkd
     1381 staysscsll sgtaqsnytd vasnhwaiea ihfmkqanvm egyknntfrp eekltraqav
     1441 kvlnrlfkrg plngvtkssf sdvstghwaf keieeagrth syilndsnee yiqd
//
LOCUS       WP_257989820             150 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6843 domain-containing protein [Bacillus infantis].
ACCESSION   WP_257989820
VERSION     WP_257989820.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF044334.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20862.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..150
                     /product="DUF6843 domain-containing protein"
                     /calculated_mol_wt=16648
     Region          29..>120
                     /region_name="BA_2398_like"
                     /note="Putative Bacillus anthracis lipoprotein and related
                     proteins; cd14815"
                     /db_xref="CDD:271352"
     Site            order(57..58,98,100..104)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:271352"
ORIGIN      
        1 mytkigiavl vliflvtayr liaiqegvdq tyllpsgfeg cvvinynvkg arplkinnne
       61 ivynvpksgv lntsspsdfg wineqhsgay qlrafyvdek gerieeldqe kirfgangaa
      121 qeegkperqy fyqifgsedt eskgcpvlgm
//
LOCUS       WP_257989844             266 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase [Bacillus infantis].
ACCESSION   WP_257989844
VERSION     WP_257989844.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 266)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 266)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..266
                     /product="phosphotransferase"
                     /calculated_mol_wt=30718
     Region          7..164
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(11..14,17,19,53,66..69,128,132..133,135,145..146)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          <124..>164
                     /region_name="SrkA"
                     /note="Ser/Thr protein kinase RdoA involved in Cpx stress
                     response, MazF antagonist [Signal transduction
                     mechanisms]; COG2334"
                     /db_xref="CDD:441905"
ORIGIN      
        1 mrnqekseel ltggnvsnvy rsgdtirrel kadskkihtl lqylgnkgfa fapkflgide
       61 knreiltfie geagnyplkk ymwsnvalke iagmlrlyhd avsgfpides wqpidntpqp
      121 fevvchndfa vyniifkhek pagiidfdha apgprlwdia yalytcvpls rlyhtetgea
      181 vyydrskdae rikqrvalff qsydmegleq gylemvllri eglcktirrk agegdkafqk
      241 mieeghlehy qkelqfireh geewim
//
LOCUS       WP_257989849              66 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5957 family protein [Bacillus infantis].
ACCESSION   WP_257989849
VERSION     WP_257989849.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040273.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19382.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..66
                     /product="DUF5957 family protein"
                     /calculated_mol_wt=6876
     Region          4..61
                     /region_name="DUF5957"
                     /note="Family of unknown function (DUF5957); pfam19382"
                     /db_xref="CDD:437214"
ORIGIN      
        1 mrgfaamllg iaggfilgia lssvigiism glfsqpfgik ylpyftaaic avlvpvmdrk
       61 slknkq
//
LOCUS       WP_257989873             263 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein [Bacillus
            infantis].
ACCESSION   WP_257989873
VERSION     WP_257989873.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 263)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..263
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=28359
     Region          41..261
                     /region_name="PBP2_GlnP"
                     /note="Glutamine-binding domain of ABC transporter, a
                     member of the type 2 periplasmic binding fold protein
                     superfamily; cd13619"
                     /db_xref="CDD:270337"
     Site            order(47,50,87,104..107,112,152,155..156,197,224)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:270337"
ORIGIN      
        1 mkkiqlfsfm mlvmlvlaac gtddadssgd ggssgddgsk tytvgtdtty ppfefeegge
       61 ykgididimn aiaeeegfei elkpmdfggi ipailadqld vaiagmsitd drkekvdfsd
      121 pyfdagltlv vsednsdits iddlkgkvva vkngttgaeh aeeikeeagi kevrqfndsp
      181 smfqevangn advliedypv iayaiktsgl dlktvgdrlt gdqygisvkk genqelleki
      241 nsglqkikdn gtydeilgry lee
//
LOCUS       WP_257990042             547 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Bacillus infantis].
ACCESSION   WP_257990042
VERSION     WP_257990042.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 547)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..547
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=61689
     Region          8..547
                     /region_name="RocB"
                     /note="Arginine utilization protein RocB [Amino acid
                     transport and metabolism]; COG4187"
                     /db_xref="CDD:443341"
ORIGIN      
        1 myaelqgltv feqaekltae likresytnt dgerkkaefi kgiigtfpyf kvrpdfcweq
       61 eiegdpffrk nvfafikgkg kqtilyhahf dtvgiedygt lkpfahdpdg lqaffaqyea
      121 dgelwndars gdwlfgrgal dmqsgiavhl anllyfsehp geldgnllvl fnadeegqht
      181 giraalaell rlkaehglqy rasinndfis plfdgdsrky iyagtagkll pcfyiagrea
      241 hageslagld ptivaselnl risqnfnlae kvedelilpp sclymkddkk sydvqtavsc
      301 klyfnyfiyn kspvelmkel kmiameacae aerrlsesye lyrrtnslpg ggldwgmevi
      361 tfsemihyld slgldplkav rdsikeagey eadermlafa avealhrldp ekkprtilfy
      421 appflpanhi kggsilscle evlkeeaalt geefklrkyf pylsdasfls ysgtdneigl
      481 lkqnfpamde lfpvplkemk tldipslnig vygkgghkwt ervykpytfg ilpnlirklt
      541 vrllqss
//
LOCUS       WP_257990062             372 aa            linear   BCT 02-MAR-2025
DEFINITION  GAF domain-containing sensor histidine kinase [Bacillus infantis].
ACCESSION   WP_257990062
VERSION     WP_257990062.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 372)
  AUTHORS   Ortet,P., Whitworth,D.E., Santaella,C., Achouak,W. and Barakat,M.
  TITLE     P2CS: updates of the prokaryotic two-component systems database
  JOURNAL   Nucleic Acids Res 43 (Database issue), D536-D541 (2015)
   PUBMED   25324303
REFERENCE   2  (residues 1 to 372)
  AUTHORS   Heikaus,C.C., Pandit,J. and Klevit,R.E.
  TITLE     Cyclic nucleotide binding GAF domains from phosphodiesterases:
            structural and mechanistic insights
  JOURNAL   Structure 17 (12), 1551-1557 (2009)
   PUBMED   20004158
REFERENCE   3  (residues 1 to 372)
  AUTHORS   Ho,Y.S., Burden,L.M. and Hurley,J.H.
  TITLE     Structure of the GAF domain, a ubiquitous signaling motif and a new
            class of cyclic GMP receptor
  JOURNAL   EMBO J 19 (20), 5288-5299 (2000)
   PUBMED   11032796
  REMARK    Erratum:[EMBO J 2001 Mar 15;20(6):1483]
REFERENCE   4  (residues 1 to 372)
  AUTHORS   Dutta,R. and Inouye,M.
  TITLE     GHKL, an emergent ATPase/kinase superfamily
  JOURNAL   Trends Biochem Sci 25 (1), 24-28 (2000)
   PUBMED   10637609
REFERENCE   5  (residues 1 to 372)
  AUTHORS   Stock,A.M., Robinson,V.L. and Goudreau,P.N.
  TITLE     Two-component signal transduction
  JOURNAL   Annu Rev Biochem 69, 183-215 (2000)
   PUBMED   10966457
REFERENCE   6  (residues 1 to 372)
  AUTHORS   Stock,J.
  TITLE     Signal transduction: Gyrating protein kinases
  JOURNAL   Curr Biol 9 (10), R364-R367 (1999)
   PUBMED   10339418
REFERENCE   7  (residues 1 to 372)
  AUTHORS   Aravind,L. and Ponting,C.P.
  TITLE     The GAF domain: an evolutionary link between diverse
            phototransducing proteins
  JOURNAL   Trends Biochem Sci 22 (12), 458-459 (1997)
   PUBMED   9433123
REFERENCE   8  (residues 1 to 372)
  AUTHORS   Alex,L.A. and Simon,M.I.
  TITLE     Protein histidine kinases and signal transduction in prokaryotes
            and eukaryotes
  JOURNAL   Trends Genet 10 (4), 133-138 (1994)
   PUBMED   8029829
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 12128685
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..372
                     /product="GAF domain-containing sensor histidine kinase"
                     /EC_number="2.7.13.3"
                     /GO_function="GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=40712
     Region          24..166
                     /region_name="GAF_2"
                     /note="GAF domain; pfam13185"
                     /db_xref="CDD:433019"
     Region          170..372
                     /region_name="ComP"
                     /note="Signal transduction histidine kinase ComP [Signal
                     transduction mechanisms]; COG4585"
                     /db_xref="CDD:443642"
ORIGIN      
        1 mtmedrlsev kilkeiaell negtdmksvl pevlkkllev tnletgwifl idgegkynla
       61 akerlpqals lnhyapmcqg gcwcvdrfns gklnkatnii gckrienaik egrsgtnglt
      121 hhasvplrag derfgilnig sphktrfadg elallesvaf qigtalkria ltqreqelal
      181 taernrlard lhdsvnqllf svnltarggm emaegaevke tfsyiqdlaq ealsemrali
      241 wqlrprglen glvsalknyg rmlglqveae vkgvialpgk ieealwrmgq egfgnckkhs
      301 gqgsvrllve adssriimii kdegcgfyyg kgkglpsmgl nsmkaraeml kgsfsiktap
      361 gqgteiqisi pi
//
LOCUS       WP_257990072             405 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Bacillus infantis].
ACCESSION   WP_257990072
VERSION     WP_257990072.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..405
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44510
     Region          12..393
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(18..19,22..23,26,59,109..110,112..114,117,137,
                     140..141,144,218,221..222,225..227,230,258,272,322..323,
                     327,331,348,351..352,355..356,359)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mqtdrqtiig malltaicma gdsmlyivlp vhwkeaglss liqvgvllsv nrfvrlplnp
       61 ligfifkkvt frnamyiavi fsgittlgyg vvkdielwil lrsiwgfcws ifkigaylli
      121 lqlaadsnrg qlmglyngly rlgslfgmll gglfadlfgi saismilgfs afiilpflhl
      181 flpeslhint pkqtgptiye nvkllkepel irifltaflv mmlldgmlta slshlieiqy
      241 sdqvniyglv igaaalagim qairwgiapf vmskvgsald rtdekhkill lflgiaalll
      301 aviplhlpit vwlplllmhl lassslitvm dtlisqygsk ssgkvffmtt ytiimdlgaa
      361 vgpitgysle kaigmanvfw lasgimllii vmwkslkfke lpqtn
//
LOCUS       WP_257990089             403 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Bacillus infantis].
ACCESSION   WP_257990089
VERSION     WP_257990089.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..403
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44347
     Region          14..378
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(21..22,25..26,29,66,116..117,119..121,124,143,
                     146..147,150,224,227..228,231..233,236,266,270,319..320,
                     324,328,344,347..348,351..352,355)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mnqeqaakrn lmimwfanff vaasmtmvlp fislyietfg dfseeyvqqw sgwtfaitfv
       61 taflfspiwg rigdkygrkk illisgfgma vsifmmgyvt svwqlfmlrl fmgmftgfis
      121 lsqafistqt pqriagrvlg tlqtgsitgs llgpmlggvl adslgyattf qwtsisifis
      181 avlviftkef kvdlkkgskt sysskevikh iaanpvlltv lfismliqia hfsiqpilsl
      241 yvnelhghen iaffsgiafs aaglgnllma rkwgkigdqs gylkvlvfll fmaaivylpg
      301 afvtniwqlv virfllgiai ggiipvriay irqeapvsmq gevlgyntsl rflgniigpv
      361 lggflsgyfg fssvfyvtsl lllisgllli aamnrnpela nnh
//
LOCUS       WP_257990141              61 aa            linear   BCT 02-MAR-2025
DEFINITION  YhzD family protein [Bacillus infantis].
ACCESSION   WP_257990141
VERSION     WP_257990141.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025485.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14120.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..61
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..61
                     /product="YhzD family protein"
                     /calculated_mol_wt=6537
     Region          1..60
                     /region_name="YhzD"
                     /note="YhzD-like protein; pfam14120"
                     /db_xref="CDD:433731"
ORIGIN      
        1 mktykltafe ndgekildes fqagsddeak eiggnllnek glsgkthrct splgklilfh
       61 a
//
LOCUS       WP_257990241             424 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Bacillus infantis].
ACCESSION   WP_257990241
VERSION     WP_257990241.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..424
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=46524
     Region          44..417
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mkkalslfmm ivlvfgvlaa cgpkdeetgt agekteggse kpeklivwed tdkgvalkda
       61 adkfeaehgi kiefkelnit kmqenlaldg ntanapdvit mshdgtgpam vkgyikelev
      121 sdeildqfts ssvealkyeg klyglpkate tpvfiynkal lpevpenled lytkskevtk
      181 dgnygflaiw ddfyhahgvf sgfggyvfge kdskvdvtdi glnndasvea adyikkwyae
      241 glfpkgiige ksndnmnglf kegkaiavqn gpwafqdykd agidygvaam pklpngepvk
      301 tfmgvkgwfv tnfsknqewa qkfvefitne enakkrfelt geipplkslm edpefvknne
      361 gaaavmaqsq yavpmpsvpe maevwdpmkk avetiitgks eskkaldnav ktieqqiean
      421 hsgn
//
LOCUS       WP_257990278             191 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Bacillus infantis].
ACCESSION   WP_257990278
VERSION     WP_257990278.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024898.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13508.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..191
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=22691
ORIGIN      
        1 mhwyeklnqy fpieemksre hmetllkers eiyhkdegdn hvlmyveldn fvfidylfvs
       61 kaargqglgh klldklkkkg kpiilevepv dyedtdtekr lkfykregfe haqsigyrrr
      121 slatkeinsm eilywapgne seeliydsmk qtyelihtyk dahfygesyq pveevltfee
      181 dkssedvlkg l
//
LOCUS       WP_257990298             402 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Bacillus infantis].
ACCESSION   WP_257990298
VERSION     WP_257990298.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 402)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 402)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 402)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..402
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=44601
     Region          8..399
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(105,135,137,169,171,381..383,385,387)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mdfsysgrvr elqdkltefm erhvypaehv yekqlneqat rwsqvpqime alkekakaeg
       61 lwnlflpese ygaglsnley aplceimgrs ligpevfncs apdtgnmevl vrygsdeqkk
      121 rwlapllage irscfsmtep gtassdatni easieqdgde yvingrkwws sgagdprcsv
      181 aivmgktdqn aarheqqsmi lvpldapgvs iermlpvfgy dhaphghaei tyknvrvpke
      241 niiwgegkgf aiaqgrlgpg rihhcmrlig aaeraleimc rrvqtrtafg kplsrqgvig
      301 ewiadsriei eqarlltlka aymmdtvgnk eakaeiamik vtapsmalrv ldrsiqamgg
      361 agvsddypla ahwanartlr ladgpdevhr aqiaklemrk hq
//
LOCUS       WP_257990393             293 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Pseudomonas
            aeruginosa].
ACCESSION   WP_257990393
VERSION     WP_257990393.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 293)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..293
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=32245
     Region          7..285
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(107..108,109..110,113,117,119..125,217..222,
                     228..229,231..232)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176102"
ORIGIN      
        1 msvshaqlka fhavavygsf traaerlflt qpavsdqvrk leerygvllf hrnkrsvrls
       61 elgerllavt qrlfaieaea aellsassal qtgtltlavd apvhvlpqia rfcerypgia
      121 vrvetgntde slqrlfsyqa dlallgrdvs derllsltlr ndpivafvsl shpwagresi
      181 rladlddmpl vlreqgsvtr qtleeemsra glrirpaiqv egreasreav vagigvgvvs
      241 aaefgadtrv halpivdcqr rltetlvclr eqrsrrivet fldlvgedlp aps
//
LOCUS       WP_257990305             588 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Bacillus infantis].
ACCESSION   WP_257990305
VERSION     WP_257990305.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 588)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 588)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 588)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..588
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=64122
     Region          13..418
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(115,145,147,180,182,398..400,402,404)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 maktksmgsg fllteidegq lftpedftee hkmigtsarq fieqevaplk eeiesqdfgl
       61 vkellkkagd lgllahsipe qygglgldki tkgivgenig assgygvahs nhtciatlpi
      121 tyfgteeqkn kylpkmasge yigaycltep nagsdalssq tvarlneegt hyilngtkly
      181 itnaafsdtf ivyakvdgkd ftafilekdf pglilgpeen kmgikgsstr sviledcevp
      241 aenmlgeqgk ghvialnvln lgrfnlgsac mgaakyslkk aaqytqerrq fgrkiadfha
      301 tkekvgkmaa riyasesmqy rtaglleeal gdigdsadsh lagkrmseya secavckvfg
      361 setldyaade tlqlyggagf ikeygieqiy rdsrinrife gtneinrlli paglfkkaak
      421 gevdfrelte eaasailqpa slngalamer eavslmrnaf llaaglalqv hgqqiseeqe
      481 tlmklsdmai slyaaesavy rtyksinkag edaaalkidl agsyleealw ecekafrtls
      541 selalregek klasavetgf rriqlegggf srnrriaeri ykanryvc
//
LOCUS       WP_257990475             233 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF484 family protein [Pseudomonas aeruginosa].
ACCESSION   WP_257990475
VERSION     WP_257990475.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016243.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04340.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..233
                     /product="DUF484 family protein"
                     /calculated_mol_wt=25666
     Region          7..227
                     /region_name="DUF484"
                     /note="Protein of unknown function, DUF484; pfam04340"
                     /db_xref="CDD:282228"
ORIGIN      
        1 mteksqepta aldaeqvaay lsqhpeffve hdelipelri phqpgdavsl verqvrllre
       61 rniemrhrls qlmdvarend rlfdktrrlv ldlldttsle dvvstvedsl rhefqvpyvs
      121 lilfsdssvs vgrsvssaea hqaiggllsg gktvcgvlrp helaflfges drdeigsaav
      181 vslsfqglhg vlaigspdpq hyksslgtlf lgyvaevlar vlprfssplr svr
//
LOCUS       WP_257990596             923 aa            linear   BCT 02-MAR-2025
DEFINITION  VWA domain-containing protein [Bacillus infantis].
ACCESSION   WP_257990596
VERSION     WP_257990596.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024909.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13519.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..923
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..923
                     /product="VWA domain-containing protein"
                     /calculated_mol_wt=100932
     Region          <30..183
                     /region_name="ChlD"
                     /note="vWFA (von Willebrand factor type A) domain of Mg
                     and Co chelatases [Coenzyme transport and metabolism];
                     COG1240"
                     /db_xref="CDD:440853"
     Region          37..>394
                     /region_name="COG5426"
                     /note="Uncharacterized protein STM3548, contains class I
                     glutamine amidotransferase domain [General function
                     prediction only]"
                     /db_xref="CDD:444178"
     Region          <400..574
                     /region_name="YfbK"
                     /note="Secreted protein containing bacterial Ig-like
                     domain and vWFA domain [General function prediction only];
                     COG2304"
                     /db_xref="CDD:441879"
     Region          <583..664
                     /region_name="GATase1_like"
                     /note="Putative glutamine amidotransferase; pfam07090"
                     /db_xref="CDD:399821"
ORIGIN      
        1 mgiefkypfm llliipslll vflfiktakg grenrkgaal mravvfilla falavpsirl
       61 papgkpvvfi adrsasvqgr egelldfida giqskekeds yavisageta aaesslagmk
      121 gefrefstdt gkgetnleag iqlastlmpq etpgrivlls dgretagssr eaakllknrg
      181 ieldyvllds srkedmsiss lnvppalykg eeasitiaid snsakeadlr lsvnsrevlk
      241 eritvkegkn vytfkhkmde tglsaikaei saegdgfien nalqsavnik gtprvliveq
      301 eksqletild gsglladsiv peklpgslsg flpyqsiifn nvpatvvsen qmiliekavk
      361 efgsgfimag gensfglggy fktpiekllp vsmdikgkke mpslglmivm drsgsmagnk
      421 lelakeaaar svellrekdt lgfiafddrp wvivetgpld nkkdavdkia svtpgggtei
      481 ftslekayee ledlklqrkh iilltdgqsa rsadyesmie tgkennitls avalgsdadr
      541 nlleelaelg agrfydvtds svipsilsre tvmatrtyie dnpfypsiqp ypewidffag
      601 gipqmnayia teakqgakvp llsekedpvl aewqygight iaftsdisgk wsgdwarwek
      661 wpqfmnklas islpkyesea yslsvrrene etvvllegns kaalpaeiav vsdngekvda
      721 stklaapgky eikmpskpgm fyvnisqqtl tgetrtyktg ftlpyseeyl lqkqnegllk
      781 eisaltggkr leegkeafrp lkagnfekat isewlllaaf llffaeiaar rfglkliper
      841 qkakksagsd rsrllektas arrmaadrqk gvqvpesrvq eaksagrqte arkpkgrsga
      901 psvspderee rmkrlleakk rks
//
LOCUS       WP_257990703            1844 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase [Pseudomonas aeruginosa].
ACCESSION   WP_257990703
VERSION     WP_257990703.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 1844)
  AUTHORS   de la Cruz,J., Kressler,D. and Linder,P.
  TITLE     Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and
            related families
  JOURNAL   Trends Biochem Sci 24 (5), 192-198 (1999)
   PUBMED   10322435
REFERENCE   2  (residues 1 to 1844)
  AUTHORS   Aubourg,S., Kreis,M. and Lecharny,A.
  TITLE     The DEAD box RNA helicase family in Arabidopsis thaliana
  JOURNAL   Nucleic Acids Res 27 (2), 628-636 (1999)
   PUBMED   9862990
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012492.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00270.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1844
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..1844
                     /product="DEAD/DEAH box helicase"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=203638
     Region          98..404
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(123..129,347)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          1634..1718
                     /region_name="MZB"
                     /note="MrfA Zn-binding domain; pfam09369"
                     /db_xref="CDD:462776"
ORIGIN      
        1 mtvvsktvea tgvheaarsl aeslrqyiea qyhirdegli kerhallrrd atiaqvpyve
       61 atpvykvgdp ydslpipnaa idaltqlagm gvglyphpye hqsealvsfl gdeatdlvva
      121 tgtgsgktet flmpvigkla iegeerpasa elpgcramll ypmnalvndq larirrmlgn
      181 peaakvlskg rprpirfgsy tgrtpypgrr ssgrderfik plfeefyrkv aeksavqmel
      241 erigrwpskd ldafygrela qtktyvsgkk agkqyiannw ghrlvtqpgd relmtrdemq
      301 qrcpellitn ysmleymlmr piergifeqt rdwlkadprn efvlvldeah myrgaggaev
      361 allirrlcar leiprermrc iltsaslgsg ptavedgerf ardltglpvg ssrrvrviqg
      421 tseprslprp atreeaeala efdlgafqna andlgaaqma amelaarlnw qvptagdhas
      481 frdwlfenmt dfgpletlia tvsgkavrld tlsealfgef psdtaaraad allalgsyar
      541 rrsdgrvlip trlhlfhrgl pglhacvdpe csqrlgghag ptilgrlhtk pldrcyctsk
      601 grvyellthr dcgaafirgy vssdmdfvwh qpsgplsegg tielipieil veenvhprsr
      661 hkdmwlhvpt gklfpicpsd tsgyrkvkvp dkvaagqvei sfdecpvcmr rtrsskneps
      721 kvmdhvtkge apftalvrtq marqpasrti dakhpnggrk vlifsdgrqk aarlardipr
      781 dieldvfrqa valacarlea ipqeprpnls lylaflsvls ehdllifdgq dakkiaaara
      841 eferdcegdl rqaldddfep setpparyri allklfcsny yslsgttvgf veparaklrk
      901 lkddikaagi alggedvral avawidallr efafdpsldp vlrckaagyf kpdwgskgqf
      961 drafaealar rpgwgklave aieaafrsql asekdkvwfl tpntlrlrvd lshvwaqcpd
     1021 ctalmplalg gticlacgse gvilvdplvs nyvaarkgfw rlpvqealas garlsnlsve
     1081 ehtaqlsnrd rssvhattel yelrfqdvli edsdrpidvl sctttmevgv digslvaval
     1141 rnvppqreny qqragragrr gasvstvvty sqtgphdshy flnpehivag aprtpevkvd
     1201 npkiarrhvh aylvqtffhe lmgqggygpa ektsmleksl gptrqffhga rdtglnlegf
     1261 gdwvshrvls aegdlrasva awlppsldtg grpleewlae vaeellttlr rlsadvpspa
     1321 vseddgenke vednenagpn leqeeflefl ffhgllpsya fptslcsflv ekreknlkgi
     1381 levrtvqrpq qsisqalsey apgrlividk ktyrsggvfa dlpagevsra rplfatakkl
     1441 vhceacsfvr dphtaqgnds tcpvcggalk eetmiqpevf gpecarelpe ddreqeitfa
     1501 tmaqfpqpvd pevftfrpcg pnasfthatd rrlvavnrgk eggqangfsv cvecgaasvf
     1561 dqfspasgph erpyrylgpq gtpqlcsgef rrvllghdft tdlllvrlkv aaplvtdtsd
     1621 ivtlrmleda lhtiaealrl aasrhrqldl dpaefgsgfr vvpvlqnear mldiflydtl
     1681 sggagyaeva arnlpdilad tlvllenctc dtsctecldh fhnqhiqdrl drklgaallr
     1741 ygifgeeprc sppnvqevtl sqlcaslele gfrclpggmp eapmlvergg yrmalgafpg
     1801 ligrpefaha vnsaqnvhgy lalneyllrs nlpdshqrvr sffr
//
LOCUS       WP_257990725             587 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein [Bacillus
            infantis].
ACCESSION   WP_257990725
VERSION     WP_257990725.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..587
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=65627
     Region          22..575
                     /region_name="PRK10789"
                     /note="SmdA family multidrug ABC transporter
                     permease/ATP-binding protein"
                     /db_xref="CDD:182732"
ORIGIN      
        1 mkvfadlmwf fkqekksyvt givlllfvaf lqlippkvig ivvdhikndt ltsgllvnwl
       61 liligaalmm yilryywrim ifgsavklsr qlrnrlyrhf tempqsfyqr rrvgdlmaha
      121 tndlqavqqt agsgvltlvd slatggfvii amaatiswkl tliclipmpf mailtswygt
      181 llhkrfhgaq etfsslndkt qesitgikvi ktfgqekedi edfrkqshdv veknisvakv
      241 dslfdptisi ivgisfflsv afgaryvisg eltigelvsf ttylglliwp mlafgwlfni
      301 vergrasndr imsllaekae vadkdgalev vpsgdivydl srfhypneek pvledirfql
      361 krgetlgivg ktgagkttll kllirefdgf egdvrfgghs vndytleklh eaigyvpqdh
      421 flfsatvaen iafanpaser eevfkaakla nihddilqft egyetvvger gvslsggqkq
      481 risiaralmm dpevlildds lsavdaktee ailnglrknr agkttiitah rlsaiqhanl
      541 ilvldegria qkgthdelme eegwyksmyl rqqleelveh ggrshga
//
LOCUS       WP_257990784             254 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Bacillus
            infantis].
ACCESSION   WP_257990784
VERSION     WP_257990784.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 254)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..254
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=28106
     Region          9..>176
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(89,113,144,148)
                     /site_type="active"
                     /db_xref="CDD:187545"
ORIGIN      
        1 mrkkitlvgg sgtigtilyn glsskydivi ldknkpeqta afiqtdaaey edlvenipkd
       61 tdvlvnllti ktdndlenlk efhmmasihf iasfyilhaa aslgipkvlf assnhaadyy
      121 ekdgysslgr eitpqdfpis iglygvlkya segigrimar nennglsvin lrigsvhpde
      181 keavkeddrl hrtllsheda vqlfdlaiqs tvkngtyygv sdnpdkpwst etawkelgfv
      241 skknakqvlk eshe
//
LOCUS       WP_257990842             350 aa            linear   BCT 02-MAR-2025
DEFINITION  ArsR family transcriptional regulator [Bacillus infantis].
ACCESSION   WP_257990842
VERSION     WP_257990842.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 350)
  AUTHORS   Cook,W.J., Kar,S.R., Taylor,K.B. and Hall,L.M.
  TITLE     Crystal structure of the cyanobacterial metallothionein repressor
            SmtB: a model for metalloregulatory proteins
  JOURNAL   J Mol Biol 275 (2), 337-346 (1998)
   PUBMED   9466913
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013209.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01022.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..350
                     /product="ArsR family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=38732
     Region          75..153
                     /region_name="ArsR"
                     /note="DNA-binding transcriptional regulator, ArsR family
                     [Transcription]; COG0640"
                     /db_xref="CDD:440405"
     Region          190..349
                     /region_name="HATPase"
                     /note="Histidine kinase-like ATPase domain; cl00075"
                     /db_xref="CDD:469604"
     Site            order(193,197,200,222,224,226,228,263..266,278,280,
                     310..311,313)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340391"
     Site            order(246,266)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340391"
ORIGIN      
        1 mpfkeelnvi krqlevlikq aekmeassld qhskeenqft tisysgtita qegrrswkpa
       61 sktieevlap dsgslanils slghkqriem iksllqepkn aaelvkelgm gttgqlyhhm
      121 kpllhagiie qkerggsysi aadkilpill qlagaaemfe ssrylaleal reepekmnmk
      181 tegnfdanil lfslihhavq eheaghaski niylhsdgsa tvsddgrgip vsllegtsls
      241 rlqdvltdve knyledssne kagipvaain afsekltvli kkdhriyrqe yhygkaltqv
      301 vpigetnetg tsisflpdkk vfktgfhsak leekikelqg lypdlslslq
//
LOCUS       WP_257990850             413 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Bacillus infantis].
ACCESSION   WP_257990850
VERSION     WP_257990850.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..413
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45771
     Region          11..391
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(21..22,25..26,29,60,115..116,118..120,123,143,
                     146..147,150,224,227..228,231..233,236,270,274,323..324,
                     328,332,348,351..352,355..356,359)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mkqflsfden irirmllkff tvlfhtmvmp ytvvyfaaki gpslttvmii iigiisiigy
       61 llgggaadrf grkrviitse lmtgfgfvlv ccfdslqhfy ampiviafsf iyffesasnp
      121 aysaliidas nekdrkiiyt yfmwisstaf aggsllggff fenhssilff ivgltsilsa
      181 vltsllikdi plkaadaite lptapakkls ifasqlflfl cigqllinil keqfpnylsi
      241 rivskyeagn igisgykmig ylnleetiii tiaagiifkl ikrlsekmsl llglllfvlg
      301 yvclsyfihp vflmlgmlfi saggliylpt lqaitakslp ahsrgkhlsi lglvgaaggm
      361 isslfiwame fipeigitfi figmgvflmg vywrvyhfsq eayenqlrms kvg
//
LOCUS       WP_257990920             474 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding domain-containing protein [Bacillus infantis].
ACCESSION   WP_257990920
VERSION     WP_257990920.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 474)
  AUTHORS   Mees,A., Klar,T., Gnau,P., Hennecke,U., Eker,A.P., Carell,T. and
            Essen,L.O.
  TITLE     Crystal structure of a photolyase bound to a CPD-like DNA lesion
            after in situ repair
  JOURNAL   Science 306 (5702), 1789-1793 (2004)
   PUBMED   15576622
REFERENCE   2  (residues 1 to 474)
  AUTHORS   Tamada,T., Kitadokoro,K., Higuchi,Y., Inaka,K., Yasui,A., de
            Ruiter,P.E., Eker,A.P. and Miki,K.
  TITLE     Crystal structure of DNA photolyase from Anacystis nidulans
  JOURNAL   Nat Struct Biol 4 (11), 887-891 (1997)
   PUBMED   9360600
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015406.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03441.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..474
                     /product="FAD-binding domain-containing protein"
                     /calculated_mol_wt=53913
     Region          1..447
                     /region_name="PhrB"
                     /note="Deoxyribodipyrimidine photolyase [Replication,
                     recombination and repair]; COG0415"
                     /db_xref="CDD:440184"
ORIGIN      
        1 mnivwfrkdl rihdhrplae acasaeevip lyiaeplssr kevskrhiqf aaegleqlde
       61 slrdlggrlf aaqgtiidil edllnthgef slffhreyds etdrlaaewm eskglpfypf
      121 hppgqlerpk skgafrklwq esmleeltsp paavrvpdkv pdflnlsiqk alsmkvkgda
      181 irfgqnggek rgietleffl gdqlanyekn yekplassfs ssrlspylay gnisirmayq
      241 eaakkaeect eaekeqlslf qsklldrcet lqwyesesqa evienklvrt hdenhfeawr
      301 tgntgipsid asmrclhktg wlnyssrrml asfacnilll dwekaarela llfldhepav
      361 hikqmgilag aggsktvkii dpvkwgkdld ndgsfirryv pelkdvdvay ihepwlypgf
      421 fqlgypapic dvrkaikqak rqiaaqkkdq kpkdiqkskt aaqgseeqlt wdfd
//
LOCUS       WP_257990971             172 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing protein [Bacillus infantis].
ACCESSION   WP_257990971
VERSION     WP_257990971.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01966.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..172
                     /product="HD domain-containing protein"
                     /calculated_mol_wt=19471
     Region          25..>134
                     /region_name="RnaY"
                     /note="HD superfamily phosphodieaserase, includes HD
                     domain of RNase Y [Translation, ribosomal structure and
                     biogenesis, General function prediction only]; COG1418"
                     /db_xref="CDD:441028"
ORIGIN      
        1 mrdvtleqvf khriaqkylt rsgvahavav snhsfklaae rgvdpdtaak agllhdmghy
       61 twykngkwdy dlyrkndiha ikgaerahkl lirlgenpvk akeialailf htdsflpgge
      121 virtplqtiv kmadefdeep ggahhyrkmd eeraieslrr ldkkidslme ae
//
LOCUS       WP_257990995             313 aa            linear   BCT 02-MAR-2025
DEFINITION  lysylphosphatidylglycerol synthase domain-containing protein
            [Bacillus infantis].
ACCESSION   WP_257990995
VERSION     WP_257990995.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 313)
  AUTHORS   Staubitz,P., Neumann,H., Schneider,T., Wiedemann,I. and Peschel,A.
  TITLE     MprF-mediated biosynthesis of lysylphosphatidylglycerol, an
            important determinant in staphylococcal defensin resistance
  JOURNAL   FEMS Microbiol Lett 231 (1), 67-71 (2004)
   PUBMED   14769468
REFERENCE   2  (residues 1 to 313)
  AUTHORS   Kristian,S.A., Durr,M., Van Strijp,J.A., Neumeister,B. and
            Peschel,A.
  TITLE     MprF-mediated lysinylation of phospholipids in Staphylococcus
            aureus leads to protection against oxygen-independent neutrophil
            killing
  JOURNAL   Infect Immun 71 (1), 546-549 (2003)
   PUBMED   12496209
REFERENCE   3  (residues 1 to 313)
  AUTHORS   Peschel,A., Jack,R.W., Otto,M., Collins,L.V., Staubitz,P.,
            Nicholson,G., Kalbacher,H., Nieuwenhuizen,W.F., Jung,G.,
            Tarkowski,A., van Kessel,K.P. and van Strijp,J.A.
  TITLE     Staphylococcus aureus resistance to human defensins and evasion of
            neutrophil killing via the novel virulence factor MprF is based on
            modification of membrane lipids with l-lysine
  JOURNAL   J Exp Med 193 (9), 1067-1076 (2001)
   PUBMED   11342591
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015651.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03706.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..313
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /calculated_mol_wt=35031
     Region          10..>293
                     /region_name="bifunc_MprF"
                     /note="bifunctional lysylphosphatidylglycerol
                     flippase/synthetase MprF; NF033480"
                     /db_xref="CDD:468043"
ORIGIN      
        1 maiknnyill lkislpilfl ivlvfeakgm lskldwdasa glarslsyld llyifalgia
       61 alspmyfydv vllqlfsvhl prtklffysl sanaysnivg lggiagatlr tyfykkympk
      121 dsplvrtaak lsfffltgls ffaiavlavs agpldgwegv slwaialynp lflvlywrrq
      181 pfwdipgnrk gfvselvais ifewlfivlc iwgishtigv nisffqlfpi viaalctgii
      241 smipggagsf dlifllmmqr egvageaaml ilflyrlsyy lfpvllgtpf iikkcwenkk
      301 avlkmdslri fsy
//
LOCUS       WP_257991067             557 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6044 family protein [Bacillus infantis].
ACCESSION   WP_257991067
VERSION     WP_257991067.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040307.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19510.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..557
                     /product="DUF6044 family protein"
                     /calculated_mol_wt=64519
     Region          6..557
                     /region_name="DUF6044"
                     /note="Protein of unknown function (DUF6044); pfam19510"
                     /db_xref="CDD:437342"
ORIGIN      
        1 msgnlflkdr knivmalaai alyvsplfil gedahirvhd nldsnlawyk vlresgqtfg
       61 taeavipqvi nglprnafgt elsgivwlfs ifptmtayal nqlftrcaaf lgmylllksh
      121 fikipewsvi rvgaalafal tpfwpsgmls tlgmplalwa flniragkad wksylalall
      181 pfyssfvlgf ffflaamggl wlfdlfrgkg lnlrffaaia gmtllyllve yrlvhsflfl
      241 eednsrdeyf harltfahci rlafknfvlg hthvmtvhgl iilpvtlyal flvwknkswr
      301 qeriyvflfa fnfllsfwya fwfykgwlpl terfhfmdtf nfarfhflrp liiymgfala
      361 lrivwtsskt rksilaviia qiillgafne eiiysrkpsv kefyaenlfl eigkyidrpk
      421 edyrvasigi hpaiaqyngf ytldtynnfy pltykhrfrk iiaeelaknk tirryfdewg
      481 grcyiftael gkhymfkkns nkklknleld taifkemggq yifsavpiln svenglelek
      541 efttgdaawk iylykai
//
LOCUS       WP_257991050             246 aa            linear   BCT 02-MAR-2025
DEFINITION  polymer-forming cytoskeletal protein [Bacillus infantis].
ACCESSION   WP_257991050
VERSION     WP_257991050.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 246)
  AUTHORS   Kuhn,J., Briegel,A., Morschel,E., Kahnt,J., Leser,K., Wick,S.,
            Jensen,G.J. and Thanbichler,M.
  TITLE     Bactofilins, a ubiquitous class of cytoskeletal proteins mediating
            polar localization of a cell wall synthase in Caulobacter
            crescentus
  JOURNAL   EMBO J 29 (2), 327-339 (2010)
   PUBMED   19959992
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016408.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04519.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..246
                     /product="polymer-forming cytoskeletal protein"
                     /calculated_mol_wt=25455
     Region          <25..94
                     /region_name="CcmA"
                     /note="Cytoskeletal protein CcmA, bactofilin family
                     [Cytoskeleton]; COG1664"
                     /db_xref="CDD:441270"
ORIGIN      
        1 milqgtgkls ingvgssdgg sfdlvsingk gtvngniecr ildcngsgqf ngdvlsseka
       61 kingsaaiag sfkgvtlsid gsagfsgdva vsdemkvngk gtiggklssg tisvngwlta
      121 gggvetesfk seghfiigsh laaanieasi igeckvqeir grniiikqkk dnplrgllqs
      181 fipsrleaal iegeklhien tsvkmvrgkh ivigenasad fveytgslry egnvkavesr
      241 riesit
//
LOCUS       WP_257989976              65 aa            linear   BCT 02-MAR-2025
DEFINITION  gamma-type small acid-soluble spore protein [Bacillus infantis].
ACCESSION   WP_257989976
VERSION     WP_257989976.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 65)
  AUTHORS   Whiteaker,J.R., Warscheid,B., Pribil,P., Hathout,Y. and Fenselau,C.
  TITLE     Complete sequences of small acid-soluble proteins from Bacillus
            globigii
  JOURNAL   J Mass Spectrom 39 (10), 1113-1121 (2004)
   PUBMED   15468161
REFERENCE   2  (residues 1 to 65)
  AUTHORS   Sun,D.X. and Setlow,P.
  TITLE     Cloning and nucleotide sequencing of genes for a second type of
            small, acid-soluble spore proteins of Bacillus cereus, Bacillus
            stearothermophilus, and 'Thermoactinomyces thalpophilus'
  JOURNAL   J Bacteriol 169 (7), 3088-3093 (1987)
   PUBMED   3036769
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016171.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04259.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..65
                     /product="gamma-type small acid-soluble spore protein"
                     /GO_process="GO:0030435 - sporulation resulting in
                     formation of a cellular spore [Evidence IEA]"
                     /calculated_mol_wt=7089
     Region          1..63
                     /region_name="SspE"
                     /note="Small acid-soluble spore protein SspE (gamma-type)
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG5853"
                     /db_xref="CDD:444555"
ORIGIN      
        1 manrqnqsqa gtniqevrqq naqasqgqqg qygtefaset nvqevrqqnq qaearkgqna
       61 gkqsr
//
LOCUS       WP_257991132             186 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleotidyltransferase domain-containing protein [Bacillus
            infantis].
ACCESSION   WP_257991132
VERSION     WP_257991132.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Bacot-Davis,V.R., Bassenden,A.V., Sprules,T. and Berghuis,A.M.
  TITLE     Effect of solvent and protein dynamics in ligand recognition and
            inhibition of aminoglycoside adenyltransferase 2''-Ia
  JOURNAL   Protein Sci 26 (9), 1852-1863 (2017)
   PUBMED   28734024
REFERENCE   2  (residues 1 to 186)
  AUTHORS   Cox,G., Stogios,P.J., Savchenko,A. and Wright,G.D.
  TITLE     Structural and molecular basis for resistance to aminoglycoside
            antibiotics by the adenylyltransferase ANT(2'')-Ia
  JOURNAL   mBio 6 (1), e02180-14 (2015)
   PUBMED   25564464
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 186)
  AUTHORS   Chen,Y.G., Qu,T.T., Yu,Y.S., Zhou,J.Y. and Li,L.J.
  TITLE     Insertion sequence ISEcp1-like element connected with a novel
            aph(2'') allele [aph(2'')-Ie] conferring high-level gentamicin
            resistance and a novel streptomycin adenylyltransferase gene in
            Enterococcus
  JOURNAL   J Med Microbiol 55 (Pt 11), 1521-1525 (2006)
   PUBMED   17030911
REFERENCE   4  (residues 1 to 186)
  AUTHORS   Cameron,F.H., Groot Obbink,D.J., Ackerman,V.P. and Hall,R.M.
  TITLE     Nucleotide sequence of the AAD(2'') aminoglycoside
            adenylyltransferase determinant aadB. Evolutionary relationship of
            this region with those surrounding aadA in R538-1 and dhfrII in
            R388
  JOURNAL   Nucleic Acids Res 14 (21), 8625-8635 (1986)
   PUBMED   3024112
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022167.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10706.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..186
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /calculated_mol_wt=21843
ORIGIN      
        1 mfrecrkaag wmegfekpwf iaggwaidlf igkqtrphtd leigifredq qalksypsdw
       61 efwkavsgsl iswhgefikl piheihavdr vhnqqlevll seceegtwif rrnfdiscpa
      121 aeailftkda ipylnpqivl lfklkarprd qadfqrakdy lskdqrdwlk qairqmdthh
      181 pwisyl
//
LOCUS       WP_257991322             112 aa            linear   BCT 02-MAR-2025
DEFINITION  YlbF family regulator [Bacillus infantis].
ACCESSION   WP_257991322
VERSION     WP_257991322.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 112)
  AUTHORS   Carabetta,V.J., Tanner,A.W., Greco,T.M., Defrancesco,M.,
            Cristea,I.M. and Dubnau,D.
  TITLE     A complex of YlbF, YmcA and YaaT regulates sporulation, competence
            and biofilm formation by accelerating the phosphorylation of Spo0A
  JOURNAL   Mol Microbiol 88 (2), 283-300 (2013)
   PUBMED   23490197
REFERENCE   2  (residues 1 to 112)
  AUTHORS   Hamze,K., Julkowska,D., Autret,S., Hinc,K., Nagorska,K.,
            Sekowska,A., Holland,I.B. and Seror,S.J.
  TITLE     Identification of genes required for different stages of dendritic
            swarming in Bacillus subtilis, with a novel role for phrC
  JOURNAL   Microbiology (Reading) 155 (Pt 2), 398-412 (2009)
   PUBMED   19202088
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017902.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06133.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..112
                     /product="YlbF family regulator"
                     /calculated_mol_wt=12702
     Region          11..112
                     /region_name="Com_YlbF"
                     /note="Control of competence regulator ComK, YlbF/YmcA;
                     cl42071"
                     /db_xref="CDD:455416"
ORIGIN      
        1 mrallqqgpa letiirgsre yqllrklaae inadpaarql iedfrsihhl lqekqirgen
       61 lgaadiqklq mlesslmqnq ktasylqaee qifqaiqeln milarpmeei yg
//
LOCUS       WP_257991339             449 aa            linear   BCT 02-MAR-2025
DEFINITION  solute carrier family 23 protein [Bacillus infantis].
ACCESSION   WP_257991339
VERSION     WP_257991339.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 449)
  AUTHORS   Hogue,D.L. and Ling,V.
  TITLE     A human nucleobase transporter-like cDNA (SLC23A1): member of a
            transporter family conserved from bacteria to mammals
  JOURNAL   Genomics 59 (1), 18-23 (1999)
   PUBMED   10395795
REFERENCE   2  (residues 1 to 449)
  AUTHORS   Tsukaguchi,H., Tokui,T., Mackenzie,B., Berger,U.V., Chen,X.Z.,
            Wang,Y., Brubaker,R.F. and Hediger,M.A.
  TITLE     A family of mammalian Na+-dependent L-ascorbic acid transporters
  JOURNAL   Nature 399 (6731), 70-75 (1999)
   PUBMED   10331392
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013056.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00860.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..449
                     /product="solute carrier family 23 protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=46611
     Region          30..426
                     /region_name="Xan_ur_permease"
                     /note="Permease family; cl23746"
                     /db_xref="CDD:474042"
ORIGIN      
        1 mderktesgq neiligleek lppgktvlyg lqhvfvsnvw ldpifvaami glpfalsanm
       61 vnsifiaagi vtfiqatklv rlpiiqgpsa afdsimisag kanglaaatg gilasaaivf
      121 llsitgvlgr lralftpvis gtviflvgis lagftlhefl ggspgdegfa spstlllsit
      181 talivlglsl fgkglwksfs flialiagda lafslgkadf smimesdwfg lphflpyglt
      241 fewgafltff iaylvaviea mgvyqassdm lkteltakki rggfagesag sfvsaliggf
      301 pttayaqnvg llrltgvgsr ypvmaaavif lvlglvpkag allaltpapv vggiflpaaa
      361 tlvftgisil akaeatqiny mivglsmlla islpayavna agiagtfltn siligaftsi
      421 flqlalvslp nlfkkgaasn erridqids
//
LOCUS       WP_257991354             288 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Bacillus infantis].
ACCESSION   WP_257991354
VERSION     WP_257991354.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00528.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..288
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=32276
     Region          37..249
                     /region_name="DppB"
                     /note="ABC-type dipeptide/oligopeptide/nickel transport
                     system, permease component [Amino acid transport and
                     metabolism, Inorganic ion transport and metabolism];
                     COG0601"
                     /db_xref="CDD:440366"
ORIGIN      
        1 mgtifrslts vllililaal plglhngdak lvfsiypmfe avgdffqgll sgdswhylqg
       61 ererllledl ipywlssfiy livsaviavi lsvvfgvflw kkggrvlnav lgfigmlpdf
      121 ilvlllqllt vfvhketgik tvkvasssms epaiflpiit lviiplfyll rslsershev
      181 kgedyiltak akglrkgniy lfhifsnvlp flkadlhkil simlgnlfii eylyntrgit
      241 amlfvqqiqf gyqynlvilc llsllllylv slytlklllc laerglqg
//
LOCUS       WP_257991411             192 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Bacillus infantis].
ACCESSION   WP_257991411
VERSION     WP_257991411.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 192)
  AUTHORS   Ren,J., Sainsbury,S., Nettleship,J.E., Saunders,N.J. and Owens,R.J.
  TITLE     The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals
            a novel protein fold incorporating a helix-turn-helix motif
  JOURNAL   Proteins 78 (7), 1798-1802 (2010)
   PUBMED   20196080
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013540.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01381.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..192
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=21964
     Region          10..>58
                     /region_name="HipB"
                     /note="Transcriptional regulator, contains XRE-family HTH
                     domain [Transcription]; COG1396"
                     /db_xref="CDD:441006"
     Region          76..179
                     /region_name="PAS_4"
                     /note="PAS fold; pfam08448"
                     /db_xref="CDD:312075"
ORIGIN      
        1 mhkqhkrdwl ikirkarklt qetvatkafi drayyaqies gvrnpsedir qkiaqilnfh
       61 ssafnaddks pfryaleaap miiahcdmel kytwifnhhp lfppesligk rddelglgkg
      121 gemygqmkrt viekqisirk tvsfslpdqh lytymifahp lfdhtkqiig aatiltelsk
      181 iplaknpdgq se
//
LOCUS       WP_257991464             311 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Bacillus infantis].
ACCESSION   WP_257991464
VERSION     WP_257991464.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024118.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12706.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..311
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=35678
     Region          61..237
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(112,114,116..117,183..184,206,237)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 mkgsryenyd gvknehgfrd mlrwsrerrr nkkdlnvqia qaekketekl kknresmsvt
       61 wighstfllq mgglniitdp vwalrmgvqr rltepglpia slppidvvli shghydhldf
      121 paikklagnp afyvpaglkk aftkrgyknv headwwdsfe agalkltfvp aqhwtrrgln
      181 dtntshwggw tiehpeeeqs vyfagdtgyf rgfkdiaekh kldivlmpig ayepewfmsv
      241 shinpedavk aflelkgklf ipmhygayrl addtgpeale rlekewdrla lpkeqlkvlk
      301 lggtfwpgeh l
//
LOCUS       WP_257991469             107 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Bacillus infantis].
ACCESSION   WP_257991469
VERSION     WP_257991469.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..107
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=12583
     Region          12..102
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(14..16,30,46..48)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133380"
ORIGIN      
        1 mkeepsyknr kvisigvvse ltglserqir yyeerslifp ertekgsrky sfsdveqlid
       61 iankreegvr tdeirsdylk kniakdeklr eqmlkgqina rfgirrk
//
LOCUS       WP_257991502             516 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Bacillus infantis].
ACCESSION   WP_257991502
VERSION     WP_257991502.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 516)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..516
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=58905
     Region          4..118
                     /region_name="REC_YesN-like"
                     /note="phosphoacceptor receiver (REC) domain of YesN and
                     related helix-turn-helix containing response regulators;
                     cd17536"
                     /db_xref="CDD:381091"
     Site            order(9..12,15..17,20,106..107)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381091"
     Region          151..276
                     /region_name="GGDEF_2"
                     /note="GGDEF-like domain; pfam17853"
                     /db_xref="CDD:465533"
     Region          <400..515
                     /region_name="AraC"
                     /note="AraC-type DNA-binding domain and AraC-containing
                     proteins [Transcription]; COG2207"
                     /db_xref="CDD:441809"
ORIGIN      
        1 mykvivvedd riirrgicqs iqwgehgfvv ageagdgeta lgliekeqpq vvisdinmpf
       61 mdglemgkkv keispetrii fltgyeefky aqqalkmkaf dyllkpvdse hlllkakeaa
      121 adwelearre mkvteslpyl qqkffrelmr eghqqvdvek elnelgvgle gptfaavlvh
      181 staglhenti qrlkeaassl ftagqfivmh idsnecavll slddendsrk gklanlmlrt
      241 lyehdgqsat itlgrtyqnl felgkslves rlamdlrhim gngkvfsfed tvsgekeadd
      301 slhmlesele cqiklgipek vseilgrlnk ailegralpl shlkvlalkf stllffesek
      361 wkkeesisfn ssdvyerime metltemmei lqslvsqwad allrkqdknh fshvdqaiiy
      421 ikehfhdstl slkkvaeiih vstpylsnlf klekgfnfgd yllelrmnka meelrlgdlk
      481 tyeicekvgy snpqyfsvcf kkytgytpae ykkqfe
//
LOCUS       WP_257991515             933 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Bacillus infantis].
ACCESSION   WP_257991515
VERSION     WP_257991515.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 933)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..933
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..933
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=104359
     Region          1..179
                     /region_name="chemoreceptor_sensor"
                     /note="4-helix bundle ligand binding sensor domain of
                     chemoreceptors such as Tar or Tsr; cl00144"
                     /db_xref="CDD:444710"
     Site            order(44,47..48,51..52,54..55,58..59,62..63,65..66,69..72,
                     78,143,165,168..169)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:438629"
     Site            order(56..57,60,63,85..86,89,116,119..120,123,153)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:438629"
     Region          203..257
                     /region_name="HAMP"
                     /note="HAMP domain; pfam00672"
                     /db_xref="CDD:459898"
     Region          290..428
                     /region_name="GAF_2"
                     /note="GAF domain; pfam13185"
                     /db_xref="CDD:433019"
     Region          415..756
                     /region_name="BaeS"
                     /note="Signal transduction histidine kinase [Signal
                     transduction mechanisms]; COG0642"
                     /db_xref="CDD:440407"
     Region          808..933
                     /region_name="CheY"
                     /note="CheY-like REC (receiver) domain, includes
                     chemotaxis protein CheY and sporulation regulator Spo0F
                     [Signal transduction mechanisms]; COG0784"
                     /db_xref="CDD:440547"
ORIGIN      
        1 msfrkkqflg fgiimlfvaa ilfltvffmn gmrsnlreit edryekvkia gevrqgftqs
       61 dqvvlqlins eteadaeske eieqnrdmil kgityledrl nreeardllm qiqieysslv
      121 nteddllral egdvpeaevq rllesrqeqr dslikdlsdf safqeslmga aveqsrdtyd
      181 qmiisiiags ilclaavvaa afwvirstsl slkkiigvis rvnyadlssl prveidtkde
      241 igeiglafng maasledysl kekdytkhis eqnwlqtnia diatmyqdit diktlgekfi
      301 aeaaiildas agafylrtge grdmrflkqa syagdgkeag reefylgegl igqaaldkrt
      361 rvlnelpddy slvssglgev kpksiliapv lfegnvtavv efasirefsa leeklltqll
      421 dtlgitvnsv lgrmeierll kesqmmteel qvqseelqtq seelqvqsee lqsqseelrm
      481 ineqleertr daeqksrdlq qankdieeka eqlllsskyk seflanmshe lrtplnsill
      541 lsemlsegqg eeipeeqkev akvihasgkd llslindild lskieagkld mlfeemnlse
      601 lpsyleynfs hlaqkknldf nisiaedlpg imytdqqrfq qiiknllsns fkftekgsvs
      661 ievnladpek tknlplkaka dfwteikvad tgigipeskq siifeafqqg dgasvrkygg
      721 tglglsicre fakllggwif vdseegkgst ftlfipslpd gleeeqhtaa aqleiaaaaa
      781 aeetipetga eepevpagvs kgvrhifknk svlicdddnr niyalekalk aeamevttvq
      841 ngleclemvq qrrdfdiilm dimmpvmdgy etmqrlrsmd gleqmpiial takamkgdkq
      901 kcldagasdy iskplkldql lsvmrvwltk ask
//
LOCUS       WP_257991527              93 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6509 family protein [Bacillus infantis].
ACCESSION   WP_257991527
VERSION     WP_257991527.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040450.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20119.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..93
                     /product="DUF6509 family protein"
                     /calculated_mol_wt=10726
     Region          1..93
                     /region_name="DUF6509"
                     /note="Family of unknown function (DUF6509); pfam20119"
                     /db_xref="CDD:437951"
ORIGIN      
        1 meitghliee iidptgileg qryeflldie vpeddelyse eglslrvlfy kdetgskiln
       61 yhfffsdeka ldfaldeeee kmvesycran lpa
//
LOCUS       WP_257991641             300 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Bacillus infantis].
ACCESSION   WP_257991641
VERSION     WP_257991641.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00528.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..300
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=34078
     Region          <65..279
                     /region_name="DppB"
                     /note="ABC-type dipeptide/oligopeptide/nickel transport
                     system, permease component [Amino acid transport and
                     metabolism, Inorganic ion transport and metabolism];
                     COG0601"
                     /db_xref="CDD:440366"
ORIGIN      
        1 mlllkklfif llvlasflli lllprepvih qpsafhiemd ypfsaeaykn kiqsffqfiq
       61 eengfgksrt grkvseetil ymkrslgiil pafiismaag imagiakfsl rlrmrgkiqe
      121 alswlfssvp dfflymslqy llikliqlgf pqitlygheh wysfllpmis ltlfpfihmv
      181 nftaaamdke sgedyirtay skglgkkriy lhilfncagt llnqaqfiml yilsslpive
      241 klsgyegagn nllksilnyn dvssfalmlp flvlmfltil asqsakylfm pkrpggseli
//
LOCUS       WP_257991644             798 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Bacillus infantis].
ACCESSION   WP_257991644
VERSION     WP_257991644.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00528.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..798
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=91676
     Region          3..296
                     /region_name="DppC"
                     /note="ABC-type dipeptide/oligopeptide/nickel transport
                     system, permease component [Amino acid transport and
                     metabolism, Inorganic ion transport and metabolism];
                     COG1173"
                     /db_xref="CDD:440786"
     Region          369..795
                     /region_name="M1_APN_like"
                     /note="Peptidase M1 family similar to aminopeptidase N
                     catalytic domain; cd09604"
                     /db_xref="CDD:341067"
     Site            order(478,480..481,624,625..626,649..650,653,668,672,729)
                     /site_type="active"
                     /db_xref="CDD:341067"
ORIGIN      
        1 mnkllrvnys lyigiflvsv lfffavfgpy laphqlseal etqykdgkvl appiqpfesd
       61 eyplgtdrwg ydiasmilng lkytvfiaia vtfikmvlgt iiglyvgtwk rtpgwllafe
      121 nawsfvplfl ivyfffrgin tltfiptwkl imlfilitsl vsipsivssv rqktaelnks
      181 vyieaaralg agrhrliwkh ifpqlketfl vmfileivyv itimgqlgll eifvggtrvt
      241 ydpllfhsit kelaglvgqa rgniygnlhi lmvplavlli ttisfsllan gmknrfqsny
      301 qrtpwiktgq epklkpvrkn ydaqkgrkfl spepmaliil lilfvsagty vfatkdqdig
      361 vknfskaeyd lslkmnkqge fsstanievk nesedewdkl vfyfipnvfk eghsfqsveg
      421 yasvtlddik vdgkeakyel kddtltvfls ekmdegdkgk veinyeftlp ekgnrfskvg
      481 enfylaqwyp mlatfrehkw nkeeysegle tyhtdfsdyk vtydipksyt iastadedpp
      541 asetrgtlka kkvrdffisi lkdtsvyeae tengvkvrlf tkedhnkdpe qslelakkal
      601 sfyqdkigey phetldvvld egqfmeypgi vtinpyieds yfyqvsivhe iahqyfygtv
      661 sndpyyeawv degitefats myfyagegeg emrafsipfn rmkgieeenv krqysnvpld
      721 evahngyvyg qpavkllelv nnrymvkgnd prdvgmdfls syyekykyke vdsemfadfa
      781 adyffvprgy ftdwlele
//
LOCUS       WP_257991751             373 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Bacillus infantis].
ACCESSION   WP_257991751
VERSION     WP_257991751.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 373)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..373
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=39389
     Region          3..369
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 minqerllne flelvqvdse tkheaeiakv lkkkftdlgv dvfeddttae tghgagnlic
       61 tlegtkdgvd tiyftshmdt vvpgkgikps iengyvvtdg ttilgaddka glavmlevvr
      121 vlkeqniehg tiqfiitvge esglvgakal drslvkakfg yaldsdgkvg niivaaptqa
      181 kvkaviqgkt ahagvapekg vsaitiaaka varmplgrid eettanigrf eggqqtnivc
      241 drvdilaear sligekmeaq aakmkeafes aaeemggkad veiqvmypgf kygegdhvve
      301 vakkaaakig rssellhsgg gsdanviagf giptvnlavg yeeihttner mpveelnklg
      361 emvvaiinev sgn
//
LOCUS       WP_257991816             216 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4912 domain-containing protein [Bacillus infantis].
ACCESSION   WP_257991816
VERSION     WP_257991816.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027583.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16258.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..216
                     /product="DUF4912 domain-containing protein"
                     /calculated_mol_wt=24445
     Region          2..>29
                     /region_name="COG1356"
                     /note="Transcriptional regulator [Transcription]"
                     /db_xref="CDD:440967"
     Region          97..177
                     /region_name="DUF4912"
                     /note="Domain of unknown function (DUF4912); cl46799"
                     /db_xref="CDD:481139"
ORIGIN      
        1 mqseiirlre kglsfrkiak elgttrgkvq yqwmkhvkes dskaeekekk hrvmeaarvp
       61 adylmkeegi sawqvqdgsi ysfwrtaamk ktlassyfev peseledvir lyditsiifn
      121 gsnahsfqeh vpaegqnsil feglapdrsy cieagakvhg rfipfmrsns vqiprnsaeq
      181 agrlkedlka heagsppnwi ehvstysfyt ndkggv
//
LOCUS       WP_257991911             579 aa            linear   BCT 02-MAR-2025
DEFINITION  SH3 domain-containing protein [Bacillus infantis].
ACCESSION   WP_257991911
VERSION     WP_257991911.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019844.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08239.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..579
                     /product="SH3 domain-containing protein"
                     /calculated_mol_wt=61040
     Region          28..156
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          100..224
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          252..378
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
     Region          401..578
                     /region_name="AmiC"
                     /note="N-acetylmuramoyl-L-alanine amidase [Cell
                     wall/membrane/envelope biogenesis]; COG0860"
                     /db_xref="CDD:440621"
ORIGIN      
        1 mlksskillf lcfillaggv wrpsestaas ggtaliadsg vnirsgpgls ypivkqaakg
       61 drypilkesg dwlqlslsgg skgwvagwla vkeagkkdaa tvssggtvta dglrvrsnpg
      121 tdasviavln kgqkvgivek egnwvritgs fgngwvsadf itegsskada aaegtvtgds
      181 vnvrstpgtq gtvlgklqsg drvsivsnng swteiifrgs hawvssefis sskglspkps
      241 agssakpsgg ltgtvtaqtl nlrdssslng kvlgsvskge iysiieeknn wakieykpgs
      301 ygwiaawyld kseissangs kpakgstiti lhngtnirkd astassvlql anagesfevl
      361 grendwykis ldgktgyvag wivslsgssp qiekpgaely lqgktivldp ghggrdngtt
      421 gargtqektv tiktaqllys klkaaganvi ltrstdtyip lssrvgsasy hnadafislh
      481 ydsindksvr gmtvyyyhgf qkalaesvhs slaaetklkd rgvrtgdyfv irennknail
      541 lelgylsnpa eemlvtspqy qeaaaagiyq glaryfkry
//
LOCUS       WP_257992128             606 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Cupriavidus pauculus].
ACCESSION   WP_257992128
VERSION     WP_257992128.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus pauculus
  ORGANISM  Cupriavidus pauculus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14559.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Cupriavidus pauculus"
                     /db_xref="taxon:82633"
     Protein         1..606
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=66681
     Region          <117..583
                     /region_name="PEP_TPR_lipo"
                     /note="putative PEP-CTERM system TPR-repeat lipoprotein;
                     TIGR02917"
                     /db_xref="CDD:274350"
     Region          272..297
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(273..274,277..278,280,304,307..308,311..312,
                     314..315,343,346..347,350..351,354)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          302..332
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          337..367
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          375..398
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          452..482
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          490..516
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(491..492,495..496,498,523,526..527,530..531,
                     533..534,556,559..560,563..564,567)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          521..551
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          555..583
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mntfrfrrha ralgvaacla laslahaapa tvaqnddevi evpgpsanak gartplpnva
       61 ltpeilyrvl aaeislqrgl vgpayrtymd laretrdprl aqrateiafn arvaqqalda
      121 arlwaelapk spaarqvlst llvlngrwed aepllvqqla aapanhrgea illlqqqmar
      181 tsdptgavgv lqritandak laethlalar areaagdnag alaeldqalr vkpdlepaal
      241 msaelqaesa tdksievlkr flakspssvn ghitlarlyl qkndmeaara efevlrkvap
      301 ndprvplalg ltslqarsyd eaerylkeyl qmaekspaan pdvayqylaq iaeekkdyaa
      361 aigwldkied grlaiaaqak rgqllarmgk lddaqavfgd lladaedisd pvqraqrmta
      421 irqaevgall evkaydrark vlnervkvep dnadwlyela mlderekryd smerglrkvi
      481 alqpeqkqgy nalgysladr nerlpearkl leraselgpd dpyimdslaw vkyrqgelqp
      541 aadllrtays kapeaeigah lgevlwqlgq heearktwte aakvepentt lidtlrrynq
      601 svslsk
//
LOCUS       WP_257992158             123 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4064 domain-containing protein [Bacillus infantis].
ACCESSION   WP_257992158
VERSION     WP_257992158.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024670.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13273.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..123
                     /product="DUF4064 domain-containing protein"
                     /calculated_mol_wt=13237
ORIGIN      
        1 mkrtaefvlg lvggiigill sflgffiafv aaasddqqaa giifivtllf fmiqagaliv
       61 gclvnrmnhk lfgglmiafg vlsfpisifl mfvpsvlyii sgalgfrvpq qrqehsltle
      121 kei
//
LOCUS       WP_257992136             337 aa            linear   BCT 02-MAR-2025
DEFINITION  metal ABC transporter solute-binding protein, Zn/Mn family
            [Bacillus infantis].
ACCESSION   WP_257992136
VERSION     WP_257992136.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 337)
  AUTHORS   Ilari,A., Alaleona,F., Tria,G., Petrarca,P., Battistoni,A.,
            Zamparelli,C., Verzili,D., Falconi,M. and Chiancone,E.
  TITLE     The Salmonella enterica ZinT structure, zinc affinity and
            interaction with the high-affinity uptake protein ZnuA provide
            insight into the management of periplasmic zinc
  JOURNAL   Biochim Biophys Acta 1840 (1), 535-544 (2014)
   PUBMED   24128931
REFERENCE   2  (residues 1 to 337)
  AUTHORS   Gabbianelli,R., Scotti,R., Ammendola,S., Petrarca,P., Nicolini,L.
            and Battistoni,A.
  TITLE     Role of ZnuABC and ZinT in Escherichia coli O157:H7 zinc
            acquisition and interaction with epithelial cells
  JOURNAL   BMC Microbiol 11, 36 (2011)
   PUBMED   21338480
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 337)
  AUTHORS   Lee,Y.H., Deka,R.K., Norgard,M.V., Radolf,J.D. and Hasemann,C.A.
  TITLE     Treponema pallidum TroA is a periplasmic zinc-binding protein with
            a helical backbone
  JOURNAL   Nat Struct Biol 6 (7), 628-633 (1999)
   PUBMED   10404217
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013465.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01297.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..337
                     /product="metal ABC transporter solute-binding protein,
                     Zn/Mn family"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=37569
     Region          34..336
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(101..102,105,185)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238347"
ORIGIN      
        1 mrklimlltl lmpvslflag cgdgnadqak ektkdhlnvy ttvyplqyfa eriggsyvda
       61 htiyppgade htfepsqkdm mtladsdlfi yiglglegfv skaegtlene nvtllaagen
      121 idmtgtengh sheegteeeg leedghshee dghsheedgh nhgdvdphvw ldplyaadla
      181 eavkdalaek mpqhqkefee nyqklaaeld slhhefeeti asgkhkeiiv shaaygywek
      241 rygleqisvs glstsneptq keleniikta kehglnyiff eqnvssklte ivqdevgakp
      301 lqlhnlsvlt denidneety ftlmennlkg iekalnn
//
LOCUS       WP_257992182             311 aa            linear   BCT 02-MAR-2025
DEFINITION  type II secretion system F family protein [Bacillus infantis].
ACCESSION   WP_257992182
VERSION     WP_257992182.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 311)
  AUTHORS   Peabody,C.R., Chung,Y.J., Yen,M.R., Vidal-Ingigliardi,D.,
            Pugsley,A.P. and Saier,M.H.
  TITLE     Type II protein secretion and its relationship to bacterial type IV
            pili and archaeal flagella
  JOURNAL   Microbiology (Reading) 149 (Pt 11), 3051-3072 (2003)
   PUBMED   14600218
REFERENCE   2  (residues 1 to 311)
  AUTHORS   Py,B., Loiseau,L. and Barras,F.
  TITLE     An inner membrane platform in the type II secretion machinery of
            Gram-negative bacteria
  JOURNAL   EMBO Rep 2 (3), 244-248 (2001)
   PUBMED   11266368
REFERENCE   3  (residues 1 to 311)
  AUTHORS   Stathopoulos,C., Hendrixson,D.R., Thanassi,D.G., Hultgren,S.J., St
            Geme,J.W. 3rd and Curtiss,R. 3rd.
  TITLE     Secretion of virulence determinants by the general secretory
            pathway in gram-negative pathogens: an evolving story
  JOURNAL   Microbes Infect 2 (9), 1061-1072 (2000)
   PUBMED   10967286
REFERENCE   4  (residues 1 to 311)
  AUTHORS   Salmond,G.P. and Reeves,P.J.
  TITLE     Membrane traffic wardens and protein secretion in gram-negative
            bacteria
  JOURNAL   Trends Biochem Sci 18 (1), 7-12 (1993)
   PUBMED   8438237
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11449670
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..311
                     /product="type II secretion system F family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /calculated_mol_wt=35006
     Region          114..300
                     /region_name="TadC"
                     /note="Flp pilus assembly protein TadC [Extracellular
                     structures]; COG2064"
                     /db_xref="CDD:441667"
ORIGIN      
        1 mdglilvcvm msllllalgf ksfysflvek qslqshiqen ilidryrikk kksrkeaame
       61 ktfhyaddfs signrinffs esqdverwlm qagypyaltv erfqglkifl tlvgfvagvl
      121 liiigfpmsq ilimvlplvg yfstilwlkn kakqrqdelg yvlpdfldtv svtlqagigl
      181 dqalrdivpy fdgpvgeefr rfnqeidlgv preiaykgll drndniafqn liksliqgsr
      241 lgvpvattfk iqagemrslr rekikevaak aspkitlitt livmptvmil igglvvlnmi
      301 tgedsilnlf q
//
LOCUS       WP_257991415             529 aa            linear   BCT 02-MAR-2025
DEFINITION  M2 family metallopeptidase [Bacillus infantis].
ACCESSION   WP_257991415
VERSION     WP_257991415.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 529)
  AUTHORS   Isaac,R.E., Schoofs,L., Williams,T.A., Corvol,P., Veelaert,D.,
            Sajid,M. and Coates,D.
  TITLE     Toward a role for angiotensin-converting enzyme in insects
  JOURNAL   Ann N Y Acad Sci 839, 288-292 (1998)
   PUBMED   9629165
REFERENCE   2  (residues 1 to 529)
  AUTHORS   Corvol,P., Williams,T.A. and Soubrier,F.
  TITLE     Peptidyl dipeptidase A: angiotensin I-converting enzyme
  JOURNAL   Methods Enzymol 248, 283-305 (1995)
   PUBMED   7674927
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013560.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01401.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..529
                     /product="M2 family metallopeptidase"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0008237 - metallopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0008241 - peptidyl-dipeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=61508
     Region          6..516
                     /region_name="GluZincin"
                     /note="Gluzincin Peptidase family (thermolysin-like
                     proteinases, TLPs) which includes peptidases M1, M2, M3,
                     M4, M13, M32 and M36 (fungalysins); cl14813"
                     /db_xref="CDD:472708"
ORIGIN      
        1 mtaeqylqkq nealqklqkk raeaswkast tgedewnrkt aeaqtevsly lsdperfqka
       61 aellgsgeld pleqrqlqll knsmvknqld agvlkelser sseligvfnt yravldgkev
      121 sendirkilt dskdnelreq awhasktigs kvekklldlv klrnktavkl gyrnfhemsf
      181 elqeldrdvi faifdelkki sdepfrqlkr emdeeiaerl sisieeirpw hyadpffqea
      241 ppskalnlds yyegkdleel tastfasmgm digdmlensd lyprekknqh afctdidreg
      301 dvrvlcnnss sdywsttmlh efghavyfky idrdlpfllr apahtlttea iamlygrmgr
      361 npewlgkflg inekeleela welksalrrq mlisarwfit fslfekelye npdqdlnrlw
      421 wkivkevqfl nppenqdiph waakihftlv pvyyqnyllg elttsqleqh ikknlkceil
      481 skeagsylle effkpgaalh wnekiekatg eklnpqhfid qfvgdlqqa
//
LOCUS       WP_257992210             161 aa            linear   BCT 02-MAR-2025
DEFINITION  LiaI-LiaF-like domain-containing protein [Bacillus infantis].
ACCESSION   WP_257992210
VERSION     WP_257992210.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039187.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18917.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..161
                     /product="LiaI-LiaF-like domain-containing protein"
                     /calculated_mol_wt=17890
     Region          6..47
                     /region_name="DUF5668"
                     /note="Domain of unknown function (DUF5668); pfam18917"
                     /db_xref="CDD:465909"
ORIGIN      
        1 mknqrifpgi iligfgayfl mqrsnvqlfq dfyswptlll ivgiaflfqg ygakdyeail
       61 pgvilagfgf hfhivrrlev wpdhigtfil iiglgfllra qkagagffqg llflaisill
      121 lfydkaeqll gplgpglssi lrfwpaalvl vglylllskk k
//
LOCUS       WP_257992296             422 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Bacillus infantis].
ACCESSION   WP_257992296
VERSION     WP_257992296.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..422
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=46123
     Region          22..406
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(28..29,32..33,36,68,118..119,121..123,126,146,
                     149..150,153,235,238..239,242..244,247,275,279,328..329,
                     333,337,353,356..357,360..361,364)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mafyqewaeq irgynsnirr afaaniftqv gmgifmviyn fyirelgyse qvngqiiamt
       61 alatalvlip agimsdrfgr kkamqfgava tgvillgrsm vdmqsllilf afatglgtaf
      121 iqvssipwlt enskpeqrvh lfsihfavmt ganvignlsg glltdlfafy fselasirft
      181 lllggaiyla gifpilrfqe kridkipqig gakgstrfsl kddgfkiiil favaqlfigf
      241 gaglvipyln lyfadrfnas nsaigliisl gqaataaami igpqvvrrig evkavvflql
      301 sslpflllta ytenlwlaam gflfrqalmn agnpiqmslm mskvddskrg lassvnqmvf
      361 nlgwavmgpv stglvikygd ywgysivfti tavlyligst yffvvfrrls epagrintak
      421 iv
//
LOCUS       WP_257992258             354 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Bacillus infantis].
ACCESSION   WP_257992258
VERSION     WP_257992258.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 354)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..354
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=39406
     Region          <35..328
                     /region_name="PhaC"
                     /note="Poly-beta-hydroxybutyrate synthase [Lipid transport
                     and metabolism]; COG3243"
                     /db_xref="CDD:442475"
ORIGIN      
        1 mednigssna fwsekekdrw kgffrtlsaa qpeqgctyrr avwkknkavl whyppaerky
       61 stpmfliysl inqpsildla pnesmievlv nkgydvylid fgapgyedkd ltitdyirdy
      121 iakaaarals hsgaseltvm gfclggtiaa iyasiseqpi knlilfvtpi dfsilpayde
      181 wieavstgra dfdavidalg iipapfmeag mrlltspiyl shylsllnrs ydekytekwl
      241 rfntwttghi pfsgaalkqi fhefgrrnsl mdgslvidgk kadlaniqan llavatagdr
      301 lvpreqvepv iglvssrdrt fhlqhgghan lasggqlppy ltnwlhehse pigs
//
LOCUS       WP_257992362             461 aa            linear   BCT 02-MAR-2025
DEFINITION  RNA-binding domain-containing protein [Bacillus infantis].
ACCESSION   WP_257992362
VERSION     WP_257992362.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 461)
  AUTHORS   Al-Marsoummi,S., Vomhof-DeKrey,E.E. and Basson,M.D.
  TITLE     Schlafens: Emerging Proteins in Cancer Cell Biology
  JOURNAL   Cells 10 (9), 2238 (2021)
   PUBMED   34571887
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 461)
  AUTHORS   Chen,J. and Kuhn,L.A.
  TITLE     Deciphering the three-domain architecture in schlafens and the
            structures and roles of human schlafen12 and serpinB12 in
            transcriptional regulation
  JOURNAL   J Mol Graph Model 90, 59-76 (2019)
   PUBMED   31026779
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016232.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04326.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..461
                     /product="RNA-binding domain-containing protein"
                     /calculated_mol_wt=52446
     Region          12..134
                     /region_name="COG2865"
                     /note="Predicted transcriptional regulator, contains HTH
                     domain [Transcription]"
                     /db_xref="CDD:442112"
     Region          306..391
                     /region_name="HATPase_c_4"
                     /note="Putative ATP-dependent DNA helicase recG
                     C-terminal; pfam13749"
                     /db_xref="CDD:463975"
ORIGIN      
        1 metregtiid setllalqed hfndfkskni kpsklqetfv afantdggdl wigiedpgse
       61 gekingytvk eeandvlkvl leetlpsveg ldiefinfke kgyvlhisip kstkvhytss
      121 qkcfvrlnas treikgdkiv rlgyskgslp yekkpveild iddflesdkl hnyikrvksq
      181 qspkiflkkq rlltkkdgem fpnvccvlmf edepqatlet rsalkiyrlr ttsseykreq
      241 lhgtpiting tveeqvynak ktilelleda tyqvqgslik ldypvdaihe ilvnaiihrd
      301 yslnddihik ifdnrieiis pgklpgyisi qniyeerfsr npnlvrllhn lpdpvnhdig
      361 egldtarnel kkvglvapii eeldnsvrvs ikhqklasle svileslkdn sqitnkeirn
      421 lsgeedlqkv kkafqrlktk giiepvdpna safdyawklk k
//
LOCUS       WP_257992399             759 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Bacillus infantis].
ACCESSION   WP_257992399
VERSION     WP_257992399.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 759)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..759
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=85678
     Region          1..>479
                     /region_name="CHASE4"
                     /note="Extracellular (periplasmic) sensor domain CHASE
                     (specificity unknown) [Signal transduction mechanisms];
                     COG3322"
                     /db_xref="CDD:442551"
     Region          <274..754
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mklilktflv vgsaialfls viflfiwpal lkdanqmdkr tvlkelqrie shlssqaevl
       61 nrtnldwavw ddtflflkge ypdypavnll petfennqvn fmlfldesgs niyqsaydlk
      121 rkgpirlpae fsedfsgldk dqgvvmtelg lafysvqpvf ksdgsgpagg slimgkfldh
      181 nfvdqagkel glllsfgklk kmpdkklave sysdtkmkgn llitesdgsg sysismlmdr
      241 gfyqqkrssl iqqcyyiagf saimlllvlf lldrfilsrv arlsenlrgi qerrdtglrl
      301 pisskhkdei tnleqsinkv lasledknre irdlayidql tglpnqaylf eyyltslkgm
      361 kavfffdldg fkrindtlgh qagdiflkei aekvkglaaa knglfarlag defallvgnr
      421 srkeleeiag rilsqvgkey etfqfkaftt asvgiavspq dgttldtllq kadiamyeak
      481 stgknqfvfy edissgsyyk nllelehelk yavernelei yyqpimdneg kyvvcveall
      541 rwnhpakgli spdkfipiae etglinrmgs wvleeavkqv gkwhadgfee lslainlsks
      601 qmkdgrfvkk ldevlaryhf tpgllqieit esdvsdykke llpfvedlrk rkvkialddf
      661 gvgtsslifl kdlpvdtiki drnfvrkvpf qafdtvlltg iykilhelgl dcvtegiete
      721 eqleyirgss dsklqgyyfs kplpapelek qlnkltagv
//
LOCUS       WP_257992455             663 aa            linear   BCT 02-MAR-2025
DEFINITION  S-layer homology domain-containing protein [Bacillus infantis].
ACCESSION   WP_257992455
VERSION     WP_257992455.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 663)
  AUTHORS   Mesnage,S., Fontaine,T., Mignot,T., Delepierre,M., Mock,M. and
            Fouet,A.
  TITLE     Bacterial SLH domain proteins are non-covalently anchored to the
            cell surface via a conserved mechanism involving wall
            polysaccharide pyruvylation
  JOURNAL   EMBO J 19 (17), 4473-4484 (2000)
   PUBMED   10970841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012613.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00395.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..663
                     /product="S-layer homology domain-containing protein"
                     /calculated_mol_wt=71883
     Region          <197..395
                     /region_name="NAGPA"
                     /note="Sugar-P-sugar glycosidase (uncovering enzyme, UCE),
                     NAGPA superfamily [Carbohydrate transport and metabolism];
                     COG4632"
                     /db_xref="CDD:443670"
     Region          493..534
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          554..595
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          613..654
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
ORIGIN      
        1 mlrskkiipa iafslmfltl pqgpaladtt defnvssgvk ykhnkevins yqqhvnllei
       61 nladpytkmd ltypsplnal iptsaqaksn hyeghrvvga vngsffdpal ripmylisyn
      121 nklvnyglse fekdhyvdkp aafgvtssgk glidtyslsl smthggrtsa issmnktrla
      181 delilytpen lkptteanqy gievvfsnat knrdlsfgdk itgtvssirp fndpkvsaip
      241 adgfvlsahg nkmallegls lgdqvqidls iddkwknaqf mlasgpmlvt ggrvsltmdp
      301 nnvrsrerap rtaialdqtg tkatmvtvdg risgyskgmt lpefaqylqk lgvydainld
      361 gggsttmavr kqgteyatai nrfsdayerg vsttlqaist aslgnpkyvn aalshsgsvk
      421 qgtditvslk svldqfynpl sidpaklnit stigevqglt vkaskpgqgt itvdyagvkk
      481 qfsisvtsda psfsdvpsty kyykeisslt sqsiingypd gtfrpnvslt rmdaalllar
      541 tlkldtvnvp dvtfkdvpkt hkfynevaai agagvmngka pgvfdpkspl traemavilh
      601 rafdltgsqk vafkdvtpdt fgyysistll angitegfpd ntfrpkesvn rfqfvlflyr
      661 iie
//
LOCUS       WP_257992522              62 aa            linear   BCT 02-MAR-2025
DEFINITION  prepilin-type N-terminal cleavage/methylation domain-containing
            protein [Cupriavidus pauculus].
ACCESSION   WP_257992522
VERSION     WP_257992522.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus pauculus
  ORGANISM  Cupriavidus pauculus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019575.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07963.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..62
                     /organism="Cupriavidus pauculus"
                     /db_xref="taxon:82633"
     Protein         1..62
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /calculated_mol_wt=6884
     Region          23..>42
                     /region_name="PilA"
                     /note="Type IV pilus assembly protein, major pilin PilA
                     [Cell motility, Extracellular structures]; COG4969"
                     /db_xref="CDD:443995"
ORIGIN      
        1 mqrklnaihr gacratshat pgsqrgftli elmiavgivg llrrspfrst rrmwlarssq
       61 kh
//
LOCUS       WP_257992542             436 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Bacillus infantis].
ACCESSION   WP_257992542
VERSION     WP_257992542.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..436
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=50358
     Region          10..410
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 myvwnhftnd arvlrectal aengyhvdli cihdpnhdgl plyekkgdsf qvfrvrrypl
       61 lleklqglyt fsrknkeagg llvlfwlill vmlpipaami siffflllkt klktvwvrgg
      121 ifarmviksf ngrydiyhan dlntlpqgwi csklrlsrkk liydshevqt srtgydhpfy
      181 kyleafliyk adevivenht rarycqkvyg fyphvvhnyp fsikqnlpap fplhqmlgls
      241 keekillyqg giqtgrgldk lieavpmfke gilvligdgk iknslqeqvk qlnledrvrf
      301 iakvplaelp lytrqaylgf qvlnnvcfnh ysassnklfe ymmsgvpvva crfpeirrvv
      361 esertgicid shspkaiaga vnlllgdrel rdaysqnafr asgfynwdse kihflnlykn
      421 schseeglqw rkisik
//
LOCUS       WP_257992552             263 aa            linear   BCT 02-MAR-2025
DEFINITION  stalk domain-containing protein [Bacillus infantis].
ACCESSION   WP_257992552
VERSION     WP_257992552.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 263)
  AUTHORS   Wilmot,C.M., Hajdu,J., McPherson,M.J., Knowles,P.F. and
            Phillips,S.E.
  TITLE     Visualization of dioxygen bound to copper during enzyme catalysis
  JOURNAL   Science 286 (5445), 1724-1728 (1999)
   PUBMED   10576737
REFERENCE   2  (residues 1 to 263)
  AUTHORS   Parsons,M.R., Convery,M.A., Wilmot,C.M., Yadav,K.D., Blakeley,V.,
            Corner,A.S., Phillips,S.E., McPherson,M.J. and Knowles,P.F.
  TITLE     Crystal structure of a quinoenzyme: copper amine oxidase of
            Escherichia coli at 2 A resolution
  JOURNAL   Structure 3 (11), 1171-1184 (1995)
   PUBMED   8591028
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019450.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07833.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..263
                     /product="stalk domain-containing protein"
                     /calculated_mol_wt=30084
     Region          40..131
                     /region_name="Cu_amine_oxidN1"
                     /note="Copper amine oxidase N-terminal domain; pfam07833"
                     /db_xref="CDD:400265"
     Region          <168..253
                     /region_name="Endopep_inhib"
                     /note="IseA DL-endopeptidase inhibitor; pfam16800"
                     /db_xref="CDD:374812"
ORIGIN      
        1 mkkgiffllv lsltlgsfvs psqaeqskae wsysykglly enrmliplrv vseafgaqvk
       61 wnqsaktisi kmddktlllk vgsknvting sqstyevapk ifnnstyvpa allqkafggf
      121 ldynsqtksv fyqmddkimv valqnhlpry mrddeitdil eklnettdls kfpqirtyfr
      181 pyftdvfink lihlkgiknn ldtfrtfisp eivkyssgtk avitdsilnt ipyeqhdrti
      241 tltyengkwk vsevkiekye ayp
//
LOCUS       WP_257992705             746 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase [Bacillus infantis].
ACCESSION   WP_257992705
VERSION     WP_257992705.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..746
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=81015
     Region          132..528
                     /region_name="Peptidases_S8_subtilisin_Vpr-like"
                     /note="Peptidase S8 family domain in Vpr-like proteins;
                     cd07474"
                     /db_xref="CDD:173800"
     Site            order(141,181,239..241,271,469)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:173800"
     Site            order(141,181,469)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173800"
     Region          303..439
                     /region_name="PA_C5a_like"
                     /note="Protease-associated domain containing proteins like
                     Streptococcus pyogenes C5a peptidase. This group contains
                     various PA domain-containing proteins similar to S.
                     pyogenes C5a, including, i) Vpr, a minor extracellular
                     serine protease from Bacillus...; cd02133"
                     /db_xref="CDD:239048"
     Site            order(303,316,358..359,382..385,387)
                     /site_type="other"
                     /note="PA/protease domain interface [polypeptide binding]"
                     /db_xref="CDD:239048"
     Site            353..355
                     /site_type="active"
                     /note="putative integrin binding motif [active]"
                     /db_xref="CDD:239048"
ORIGIN      
        1 mkkvfliisl fafmliphvn artlqipplp aepedaerva ivlmkegqte qdrnsllrky
       61 pelnlrqsfq ealngfsvkg piktlnrlae eeevltisqa vtyqaenedg isligshtvr
      121 glfdekgerl sgkgvtigvi dtgidynhpd lrrnyaggrd lvdqdndpme tvrtagentf
      181 hgthvagvia angkmrgvap dakiiayral gpggagtteq viaaieqaik dkvdilnlsl
      241 gnsvngpdlp islalnkavd kgitavtssg nsgpntwtvg spgtaskais vgastpklri
      301 pyldfgsgkk vklnplqgss lwnldrsyel afgglgkpee leqikgkial iqrggltfsq
      361 kaknareaga iaviiynntd gsfagnleed aglpvvslsk qdgsqlkkrl qeetvlarty
      421 iieekdilad fssrgpvtdt weikpdvlap gvaisstvpg gylplqgtsm asphvagaca
      481 likqahpdws peeikaslmn talplynegg mlyrtyeqga griqveeavk apdlvvpasl
      541 qfgkfkiagr enehvryltv kntggrtesy sfsvpsnisg iewemplafr lepggkkkva
      601 irmridpeef kqkihdgrlv lnagsrkvsi pylyvleepd yprvmgfdfg rgdnggsyry
      661 evylpggaee fgialfdpdt lrfiqfldwk rdagkgqirr elanddlppd gvyiaqvfar
      721 kagrqdriea ylevkkeede gaigar
//
LOCUS       WP_257992746             339 aa            linear   BCT 02-MAR-2025
DEFINITION  ThiF family adenylyltransferase [Bacillus infantis].
ACCESSION   WP_257992746
VERSION     WP_257992746.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 339)
  AUTHORS   Lee,I. and Schindelin,H.
  TITLE     Structural insights into E1-catalyzed ubiquitin activation and
            transfer to conjugating enzymes
  JOURNAL   Cell 134 (2), 268-278 (2008)
   PUBMED   18662542
REFERENCE   2  (residues 1 to 339)
  AUTHORS   Lois,L.M. and Lima,C.D.
  TITLE     Structures of the SUMO E1 provide mechanistic insights into SUMO
            activation and E2 recruitment to E1
  JOURNAL   EMBO J 24 (3), 439-451 (2005)
   PUBMED   15660128
REFERENCE   3  (residues 1 to 339)
  AUTHORS   Lake,M.W., Wuebbens,M.M., Rajagopalan,K.V. and Schindelin,H.
  TITLE     Mechanism of ubiquitin activation revealed by the structure of a
            bacterial MoeB-MoaD complex
  JOURNAL   Nature 414 (6861), 325-329 (2001)
   PUBMED   11713534
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013094.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00899.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..339
                     /product="ThiF family adenylyltransferase"
                     /GO_function="GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /calculated_mol_wt=36654
     Region          1..339
                     /region_name="PRK07688"
                     /note="thiamine/molybdopterin biosynthesis ThiF/MoeB-like
                     protein; Validated"
                     /db_xref="CDD:181084"
ORIGIN      
        1 mderysrqtl fpgigtagqe kiarkhvlii gagalgsgca elliragagr ltiidrdyve
       61 esnlqrqqly aekdareklp kakaaerrlk einssvslnc ivgdadpsll aelapgtdlm
      121 idatdnfetr mvindlsqkl gipwiygacv gsfgmsftvi pgktpclncl lkavplqglt
      181 cdtggiigpa vqmtvahqga ealkilaedw davrtsfvsf dlwhsqytnm gtakakdpgc
      241 pscgaertyp yleqdnrtrt avlcgrdtvq irppgkrnld leelagqlgr lgyevkgnpy
      301 llsaelgaer avffsdgral ihgtkdeaha ksiyqrllg
//
LOCUS       WP_257992797             204 aa            linear   BCT 02-MAR-2025
DEFINITION  NTP transferase domain-containing protein [Bacillus infantis].
ACCESSION   WP_257992797
VERSION     WP_257992797.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024214.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12804.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..204
                     /product="NTP transferase domain-containing protein"
                     /calculated_mol_wt=22497
     Region          3..195
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
     Site            order(8,10,108)
                     /site_type="active"
                     /note="Ligand binding site [active]"
                     /db_xref="CDD:133025"
     Site            order(108,188,190)
                     /site_type="active"
                     /note="metal binding site [active]"
                     /db_xref="CDD:133025"
ORIGIN      
        1 mkvtgiylaa grsrrmgkdk rflpyrgvpl gsaalgealv srldhivivt ekedslkwlq
       61 psflkppysh kwsrtvcgea ggqghsiscg ieeaarskad aavilladqp fvgaeqinrl
      121 idcykeeecp fvapssqkip mppvlfssac fpllqklegd qgarsiirge lfqqgkiidf
      181 qmpllfydvd tpedyevlke lrge
//
LOCUS       WP_257992802             370 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Bacillus infantis].
ACCESSION   WP_257992802
VERSION     WP_257992802.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 370)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..370
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=41618
     Region          17..>160
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Site            order(20,22,48,79..80,157)
                     /site_type="active"
                     /db_xref="CDD:277317"
     Site            order(20,22,48,79,157)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277317"
     Region          <328..358
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
ORIGIN      
        1 mdkikelhip kdarvlvisd ihgeiglfke llkkvnfnse dyliingdic ekgrnsketv
       61 kyimelaqln prvqviegnc ealvgellae npllikylmt rryclfnewl adagfplkeq
      121 sgirevkeil iehfsqeiew lsslptaiea dqyifvhagl edladwretd rdkaisipsf
      181 lekshqadkf avvghwpvvn yskdipsdnp iidqekkiis idggnrvkdk gqlnaliiqr
      241 taeedlfsyt yvddspgcrv vkdssetfdm kgailypdyd iipleedehf tlcrqpgkdk
      301 llyvkneyil qkengacsvk sdvscslmnv stgdavsvld dscsgyalik kdgeigwvtk
      361 kvlpavvlan
//
LOCUS       WP_257992841             550 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Bacillus infantis].
ACCESSION   WP_257992841
VERSION     WP_257992841.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 550)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..550
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=62588
     Region          1..549
                     /region_name="RocB"
                     /note="Arginine utilization protein RocB [Amino acid
                     transport and metabolism]; COG4187"
                     /db_xref="CDD:443341"
ORIGIN      
        1 mlncreetla ftkqlvnies ivntngekvi ahslytllss fpyfaensgq lvieqtidde
       61 lerynvlafv kgtkrknsrt vilmghmdtv giddfnqlrd aacdpdqlad lfrneelpsg
      121 akeqlesgdw mfgrgvldmk sglashlyll kyysehpeel egnlvflaec deedgshgvl
      181 salktlkkwk dehkfhyaaa inadfvsprf egdtnryiyk gtvgkllpsf fitgaethvg
      241 scfegldpnf laaeltrqis ynpelsneal gettvppvsl kqtdlkpsyt vqtalsayvy
      301 ynffihswsp kevleklkeq ayiafnsals sfeqrnrqfa emsgepyael pwqprvytye
      361 emhrmlvdeh gqaytdhmdg fkeellldnt ldtrmyaarv veeawkwmkd kspamilfys
      421 slyspriels gqtederkli ealdqaveei qpsyphpiia knffpyisdm sfialsddea
      481 gisavsdnnp gwgtkhyvey sdirelnvpv inigpyglda hkklermemk ysleivpnlt
      541 nrviqqvlkg
//
LOCUS       WP_257992843             175 aa            linear   BCT 02-MAR-2025
DEFINITION  MEDS domain-containing protein [Bacillus infantis].
ACCESSION   WP_257992843
VERSION     WP_257992843.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 175)
  AUTHORS   Anantharaman,V. and Aravind,L.
  TITLE     MEDS and PocR are novel domains with a predicted role in sensing
            simple hydrocarbon derivatives in prokaryotic signal transduction
            systems
  JOURNAL   Bioinformatics 21 (12), 2805-2811 (2005)
   PUBMED   15814558
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10627636
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..175
                     /product="MEDS domain-containing protein"
                     /calculated_mol_wt=20423
     Region          16..169
                     /region_name="MEDS"
                     /note="MEthanogen/methylotroph, DcmR Sensory domain;
                     pfam14417"
                     /db_xref="CDD:433946"
ORIGIN      
        1 mqvkevtelr slgkghvlyf fedydrylsn vedfvitglk lneyaviien drwirkirnk
       61 lcesleeryl qkvafinnfd fyyakgdfrv nsifdflpkv ldnyseensv irswahvewr
      121 neeeiqgkll aseeaadgiv sdnkilsvca ydsdrasqef kagllanhny llldq
//
LOCUS       WP_257992888             148 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Bacillus infantis].
ACCESSION   WP_257992888
VERSION     WP_257992888.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 148)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 148)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..148
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=17092
     Region          <53..125
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
     Site            order(74..76,86..87)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
ORIGIN      
        1 mkmipyhphy asetvkmwrd skekaigqke vhsfedhvyf lnnilaglfr velalingkv
       61 vgmivynete isqlyihtdy qgmgigteli trakeqsvgr ltlytfevne naqrfyekhg
      121 fniigggfen eenlpdilye wekesgrk
//
LOCUS       WP_257992900             119 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5661 family protein [Bacillus infantis].
ACCESSION   WP_257992900
VERSION     WP_257992900.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039818.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18905.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..119
                     /product="DUF5661 family protein"
                     /calculated_mol_wt=13789
     Region          40..112
                     /region_name="DUF5661"
                     /note="Protein of unknown function (DUF5661); pfam18905"
                     /db_xref="CDD:408675"
ORIGIN      
        1 mflyfhnpys yrlinghrhd vrypspqyaa rqktfskeea aaialllgid fhtsrfdlne
       61 fwlgvntele hgrissqtnv tgddplitgk ialahlnefp dyykrlkvle keakaywnk
//
LOCUS       WP_257992917             154 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Bacillus infantis].
ACCESSION   WP_257992917
VERSION     WP_257992917.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..154
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=17047
     Region          6..137
                     /region_name="NUDIX_ADPRase"
                     /note="ADP-ribose pyrophosphatase and similar proteins;
                     cd18880"
                     /db_xref="CDD:467591"
ORIGIN      
        1 msyhirvkag aviiednril lteynvpnrg ivydlpaggv epnepiidav krgakeeaci
       61 evevgplafv yeyaphlngg kygpvhtlvm mfectrlsgs aarlpeqpdp nqtgvkwial
      121 srlgdiqlya nigkqiqdya ihkrnidlie ehrl
//
LOCUS       WP_257992990             296 aa            linear   BCT 02-MAR-2025
DEFINITION  glycine betaine ABC transporter substrate-binding protein [Bacillus
            infantis].
ACCESSION   WP_257992990
VERSION     WP_257992990.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 296)
  AUTHORS   Fraser,K.R., Harvie,D., Coote,P.J. and O'Byrne,C.P.
  TITLE     Identification and characterization of an ATP binding cassette
            L-carnitine transporter in Listeria monocytogenes
  JOURNAL   Appl Environ Microbiol 66 (11), 4696-4704 (2000)
   PUBMED   11055912
REFERENCE   2  (residues 1 to 296)
  AUTHORS   Kappes,R.M., Kempf,B., Kneip,S., Boch,J., Gade,J., Meier-Wagner,J.
            and Bremer,E.
  TITLE     Two evolutionarily closely related ABC transporters mediate the
            uptake of choline for synthesis of the osmoprotectant glycine
            betaine in Bacillus subtilis
  JOURNAL   Mol Microbiol 32 (1), 203-216 (1999)
   PUBMED   10216873
REFERENCE   3  (residues 1 to 296)
  AUTHORS   Kempf,B. and Bremer,E.
  TITLE     OpuA, an osmotically regulated binding protein-dependent transport
            system for the osmoprotectant glycine betaine in Bacillus subtilis
  JOURNAL   J Biol Chem 270 (28), 16701-16713 (1995)
   PUBMED   7622480
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015995.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04069.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..296
                     /product="glycine betaine ABC transporter
                     substrate-binding protein"
                     /GO_component="GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=32026
     Region          <35..187
                     /region_name="PBP2_OpuAC_like"
                     /note="Substrate binding domain of Lactococcus lactis
                     ABC-type transporter OpuA and related proteins; the type 2
                     periplasmic binding protein fold; cd13639"
                     /db_xref="CDD:270357"
     Region          197..>296
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mkklrmagla silalsvgla acgndsedsk egstigdgvd ykitgiepga gimsatnkal
       61 eeydnlkdyt lvesssaama aeldnaikde epiivtgwtp hwmfakydlk yledpkgiyg
      121 eaekietftr kglkedqpsa ytvldqffwt nddigkvmve iqegtdpaea aenwvkdnsd
      181 kvaewtngae evsgedisls yvawdseias tnvvakvles igynvemvql dagpmftava
      241 ngdadatvsg wlplthkdyl dqygddmerl genlegaktg lvvpsyvead siedln
//
LOCUS       WP_257993051             471 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Bacillus infantis].
ACCESSION   WP_257993051
VERSION     WP_257993051.1
KEYWORDS    RefSeq.
SOURCE      Bacillus infantis
  ORGANISM  Bacillus infantis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Bacillus infantis"
                     /db_xref="taxon:324767"
     Protein         1..471
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=50968
     Region          3..439
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(16..17,20..21,24,62,120..121,123..125,128,148,
                     151..152,155,241,244..245,248..250,253,281,285,337..338,
                     342,346,362,365..366,369..370,373)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340924"
ORIGIN      
        1 makksmigts ignamewfdf giysflavtm grvffpeidp sfqliyafat favafiarpl
       61 ggmffgmlgd rigrknvlai tmilmaastl siglipgfaa igitaqilll sarlvqgfst
      121 ggeyagamty itettpdkkr sfmasglevg tlvgfiagag lvtlltfmlg seamtawgwr
      181 ipffiaaplg iigfyfrnhl getpafeamn esieekkkes vtlkeifagh wralltctai
      241 vifynvmsyt vltympsyms eelgysegkg llmlvivmiv mipmvlamgh lsdkfgrnrv
      301 lkagligavv lsipafmlvr sgstsgaffg llilgmlltt mqgslpatlp slfytkvryg
      361 alaityntat slfggttpll vawlvsvtgn nmvpayylmg mclfgiiivt lfvretagrs
      421 lrgsapvver qsevkevlkn peraywwkne graarkgalg kglltgllnk h
//
LOCUS       WP_257993089             181 aa            linear   BCT 02-MAR-2025
DEFINITION  GntR family transcriptional regulator [Cupriavidus pauculus].
ACCESSION   WP_257993089
VERSION     WP_257993089.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus pauculus
  ORGANISM  Cupriavidus pauculus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
REFERENCE   1  (residues 1 to 181)
  AUTHORS   Hillerich,B. and Westpheling,J.
  TITLE     A new GntR family transcriptional regulator in streptomyces
            coelicolor is required for morphogenesis and antibiotic production
            and controls transcription of an ABC transporter in response to
            carbon source
  JOURNAL   J Bacteriol 188 (21), 7477-7487 (2006)
   PUBMED   16936034
REFERENCE   2  (residues 1 to 181)
  AUTHORS   Rigali,S., Nothaft,H., Noens,E.E., Schlicht,M., Colson,S.,
            Muller,M., Joris,B., Koerten,H.K., Hopwood,D.A., Titgemeyer,F. and
            van Wezel,G.P.
  TITLE     The sugar phosphotransferase system of Streptomyces coelicolor is
            regulated by the GntR-family regulator DasR and links
            N-acetylglucosamine metabolism to the control of development
  JOURNAL   Mol Microbiol 61 (5), 1237-1251 (2006)
   PUBMED   16925557
REFERENCE   3  (residues 1 to 181)
  AUTHORS   Gorelik,M., Lunin,V.V., Skarina,T. and Savchenko,A.
  TITLE     Structural characterization of GntR/HutC family signaling domain
  JOURNAL   Protein Sci 15 (6), 1506-1511 (2006)
   PUBMED   16672238
REFERENCE   4  (residues 1 to 181)
  AUTHORS   Rigali,S., Schlicht,M., Hoskisson,P., Nothaft,H., Merzbacher,M.,
            Joris,B. and Titgemeyer,F.
  TITLE     Extending the classification of bacterial transcription factors
            beyond the helix-turn-helix motif as an alternative approach to
            discover new cis/trans relationships
  JOURNAL   Nucleic Acids Res 32 (11), 3418-3426 (2004)
   PUBMED   15247334
  REMARK    Publication Status: Online-Only
REFERENCE   5  (residues 1 to 181)
  AUTHORS   Lee,M.H., Scherer,M., Rigali,S. and Golden,J.W.
  TITLE     PlmA, a new member of the GntR family, has plasmid maintenance
            functions in Anabaena sp. strain PCC 7120
  JOURNAL   J Bacteriol 185 (15), 4315-4325 (2003)
   PUBMED   12867439
REFERENCE   6  (residues 1 to 181)
  AUTHORS   Rigali,S., Derouaux,A., Giannotta,F. and Dusart,J.
  TITLE     Subdivision of the helix-turn-helix GntR family of bacterial
            regulators in the FadR, HutC, MocR, and YtrA subfamilies
  JOURNAL   J Biol Chem 277 (15), 12507-12515 (2002)
   PUBMED   11756427
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012610.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00392.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Cupriavidus pauculus"
                     /db_xref="taxon:82633"
     Protein         1..181
                     /product="GntR family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=19978
     Region          2..>181
                     /region_name="ARO8"
                     /note="DNA-binding transcriptional regulator, MocR family,
                     contains an aminotransferase domain [Transcription, Amino
                     acid transport and metabolism]; COG1167"
                     /db_xref="CDD:440781"
ORIGIN      
        1 mrqvehmils gslqpndrlp siaclvamlr vsrntvvgay egltdagllr gepgrgflwr
       61 erfparrrcr plprqrrssq rrrhdhrnrr rhvpayprpp lghavepaaa pdaardqrip
      121 igrgplglrm qiadylaatr alavdptqiv agvqkalhll aahlvhhgdh vvvespgcag
      181 f
//
LOCUS       WP_257993106             502 aa            linear   BCT 02-MAR-2025
DEFINITION  S41 family peptidase [Finegoldia magna].
ACCESSION   WP_257993106
VERSION     WP_257993106.1
KEYWORDS    RefSeq.
SOURCE      Finegoldia magna
  ORGANISM  Finegoldia magna
            Bacteria; Bacillati; Bacillota; Tissierellia; Tissierellales;
            Peptoniphilaceae; Finegoldia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015531.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03572.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Finegoldia magna"
                     /db_xref="taxon:1260"
     Protein         1..502
                     /product="S41 family peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=58137
     Region          <226..>385
                     /region_name="CtpA"
                     /note="C-terminal processing protease CtpA/Prc, contains a
                     PDZ domain [Posttranslational modification, protein
                     turnover, chaperones]; COG0793"
                     /db_xref="CDD:440556"
     Region          <307..>403
                     /region_name="Peptidase_S41"
                     /note="C-terminal processing peptidase family S41;
                     cl02526"
                     /db_xref="CDD:470603"
     Site            383
                     /site_type="active"
                     /note="Active site serine [active]"
                     /db_xref="CDD:143475"
ORIGIN      
        1 mcsriiikvm dmlqrqtlsk miklavvmif fitttsfvkq deiitisqqd lidyintsni
       61 ekydskkieg iepinsykyk iqvmdirdfm knnqvfydka nmdeitnsyn kllndsqnkt
      121 vldlnldlmk iiskykqghi silpidmkks evfiaefngk yyivganeqf nnllgsevis
      181 innikiediv drletyaige nksfrrrqqn sflnsysilk kenliaekqn iyelktgdki
      241 ikvdipfvks ddlivsklkv ngrktdilqy erkrtsnenn vsikplsypv dvnrlhyiet
      301 egdnlilryn sctennnyki ekftkdvcek ldsnkfsnii idlrynsggd ssyifnifsk
      361 mmayqganpk tkikvlvsgg tysaagdcal lfvknfhnve vigkdsgfpv ltsagnvnmf
      421 ytkdtyfqis ycmmvfrqhy edvdsylfny mnfdfdrntm tpdfhaeqsf adymigndpa
      481 mnyalrdegd nslidriknl kr
//
LOCUS       WP_257993114             367 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Finegoldia magna].
ACCESSION   WP_257993114
VERSION     WP_257993114.1
KEYWORDS    RefSeq.
SOURCE      Finegoldia magna
  ORGANISM  Finegoldia magna
            Bacteria; Bacillati; Bacillota; Tissierellia; Tissierellales;
            Peptoniphilaceae; Finegoldia.
REFERENCE   1  (residues 1 to 367)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 367)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 367)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 367)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Finegoldia magna"
                     /db_xref="taxon:1260"
     Protein         1..367
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=41543
     Region          <1..364
                     /region_name="SunT"
                     /note="ABC-type bacteriocin/lantibiotic exporters, contain
                     an N-terminal double-glycine peptidase domain [Defense
                     mechanisms]; COG2274"
                     /db_xref="CDD:441875"
ORIGIN      
        1 mekrqeelmn irneytsslq efvnnfnlik ffkreiifqk inqdksieyr nasntketls
       61 ktiyvlsfas slamylgcml vgiwlvfkdr itigqviess qlmayvtgpl lnftdimtsf
      121 ksakpvqnki mnfiseekpv egedefefnn lklnnisfky ptsdkyvlkn ldftfekgkk
      181 yiiigesgtg kstifkilqk qeiategevq lnnrnilnit dstyyskvgf atqdtgifta
      241 sikdnislfd nrpvdktiie qlglntlins kpqgidtvis nedksisgge kqriaiarll
      301 nedfdcilld estssldkhs vdiveqcils kkdltviait hhltskaiem sdcvlkleng
      361 klvqvtm
//
LOCUS       WP_257993240              99 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Cupriavidus
            pauculus].
ACCESSION   WP_257993240
VERSION     WP_257993240.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus pauculus
  ORGANISM  Cupriavidus pauculus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
REFERENCE   1  (residues 1 to 99)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Cupriavidus pauculus"
                     /db_xref="taxon:82633"
     Protein         1..99
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=10231
     Region          <1..>69
                     /region_name="CirA"
                     /note="Outer membrane receptor protein, Fe transport
                     [Inorganic ion transport and metabolism]; COG1629"
                     /db_xref="CDD:441236"
ORIGIN      
        1 mrwdffrsey etsastaggt adskklspai saiweptkda mlyasfsrsy rpvgtditla
       61 vggvqtevpk agaasepars pavfptaara gayaarslg
//
LOCUS       WP_257993225             126 aa            linear   BCT 02-MAR-2025
DEFINITION  glutaminase [Cupriavidus pauculus].
ACCESSION   WP_257993225
VERSION     WP_257993225.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus pauculus
  ORGANISM  Cupriavidus pauculus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016824.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04960.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Cupriavidus pauculus"
                     /db_xref="taxon:82633"
     Protein         1..126
                     /product="glutaminase"
                     /EC_number="3.5.1.2"
                     /GO_function="GO:0004359 - glutaminase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=13252
     Region          14..>104
                     /region_name="PRK00971"
                     /note="glutaminase; Provisional; cl00907"
                     /db_xref="CDD:469984"
ORIGIN      
        1 mtpsttvtpp fvstgnlpgp dpvrllveaa yahfredtgg kladyipala eadpsafgic
       61 vantrgdtlm igdaaqpfsi qsvskpfvfa licdalgpse aaargrryrv alqlrhgdgt
      121 atrwhq
//
LOCUS       WP_257993295             235 aa            linear   BCT 02-MAR-2025
DEFINITION  glycine zipper 2TM domain-containing protein [Cupriavidus
            pauculus].
ACCESSION   WP_257993295
VERSION     WP_257993295.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus pauculus
  ORGANISM  Cupriavidus pauculus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
REFERENCE   1  (residues 1 to 235)
  AUTHORS   Kim,S., Jeon,T.J., Oberai,A., Yang,D., Schmidt,J.J. and Bowie,J.U.
  TITLE     Transmembrane glycine zippers: physiological and pathological roles
            in membrane proteins
  JOURNAL   Proc Natl Acad Sci U S A 102 (40), 14278-14283 (2005)
   PUBMED   16179394
REFERENCE   2  (residues 1 to 235)
  AUTHORS   Anderson,B.E., Baumstark,B.R. and Bellini,W.J.
  TITLE     Expression of the gene encoding the 17-kilodalton antigen from
            Rickettsia rickettsii: transcription and posttranslational
            modification
  JOURNAL   J Bacteriol 170 (10), 4493-4500 (1988)
   PUBMED   3139629
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017269.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05433.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Cupriavidus pauculus"
                     /db_xref="taxon:82633"
     Protein         1..235
                     /product="glycine zipper 2TM domain-containing protein"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /calculated_mol_wt=23554
     Region          58..>138
                     /region_name="kgd"
                     /note="multifunctional oxoglutarate
                     decarboxylase/oxoglutarate dehydrogenase thiamine
                     pyrophosphate-binding subunit/dihydrolipoyllysine-residue
                     succinyltransferase subunit; cl39092"
                     /db_xref="CDD:476867"
     Region          <158..230
                     /region_name="SlyB"
                     /note="Outer membrane lipoprotein SlyB [Cell
                     wall/membrane/envelope biogenesis]; cl42744"
                     /db_xref="CDD:478445"
ORIGIN      
        1 msgpetlpal psqrrlnplv gataialvva sltvvaavtg vlpitkatqg ptteasysga
       61 ygngssntsa qpvmtepppl tsqpapgstt rppaydtrqa qnatapppaq ptqqaqaeek
      121 paarpshtag hvtgvqvmea ekptsglgav ggavvggllg nqigsgngri lgtvagaaag
      181 gfggnyaekk lntnksyrvs vkmddgsrrt ftyqnppgvd vgqrvhlerg vlvtg
//
LOCUS       WP_257993315             219 aa            linear   BCT 02-MAR-2025
DEFINITION  IS66 family transposase zinc-finger binding domain-containing
            protein [Dolosicoccus paucivorans].
ACCESSION   WP_257993315
VERSION     WP_257993315.1
KEYWORDS    RefSeq.
SOURCE      Dolosicoccus paucivorans
  ORGANISM  Dolosicoccus paucivorans
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Aerococcaceae; Dolosicoccus.
REFERENCE   1  (residues 1 to 219)
  AUTHORS   Han,C.G., Shiga,Y., Tobe,T., Sasakawa,C. and Ohtsubo,E.
  TITLE     Structural and functional characterization of IS679 and IS66-family
            elements
  JOURNAL   J Bacteriol 183 (14), 4296-4304 (2001)
   PUBMED   11418571
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024406.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13005.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Dolosicoccus paucivorans"
                     /db_xref="taxon:84521"
     Protein         1..219
                     /product="IS66 family transposase zinc-finger binding
                     domain-containing protein"
                     /calculated_mol_wt=25193
     Region          38..>219
                     /region_name="COG3436"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442662"
ORIGIN      
        1 mvdtltrkel lsereellar qeqlakqlel lqqelhlkne enqylrhklf grskethqva
       61 dgqlslfdgv ppieespdlp deedlvvpkk rkkqkgqkrk vleqfeevpv vheledktcp
      121 ccqdemmeig ktkvreevvy qpahyekqvh ygisykcltc seeepqdviv kapvpkapiq
      181 nslgsasvia qtiqqkyvlk vpayrqekvw kegglpinr
//
LOCUS       WP_257993310             389 aa            linear   BCT 02-MAR-2025
DEFINITION  BamA/TamA family outer membrane protein [Cupriavidus pauculus].
ACCESSION   WP_257993310
VERSION     WP_257993310.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus pauculus
  ORGANISM  Cupriavidus pauculus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
REFERENCE   1  (residues 1 to 389)
  AUTHORS   Heinz,E. and Lithgow,T.
  TITLE     A comprehensive analysis of the Omp85/TpsB protein superfamily
            structural diversity, taxonomic occurrence, and evolution
  JOURNAL   Front Microbiol 5, 370 (2014)
   PUBMED   25101071
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013283.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01103.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Cupriavidus pauculus"
                     /db_xref="taxon:82633"
     Protein         1..389
                     /product="BamA/TamA family outer membrane protein"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /calculated_mol_wt=43165
     Region          <146..389
                     /region_name="BamA"
                     /note="Outer membrane protein assembly factor BamA [Cell
                     wall/membrane/envelope biogenesis]; COG4775"
                     /db_xref="CDD:443807"
ORIGIN      
        1 mnrhrliava atlamraata gaeepaqpvq pvegekqawi drlltklgas kevdlskgid
       61 wgvlpgpfyn pemgfgigaa aiglykpkga eadtqlstls irgfgtvkga ygvsienntf
      121 faddsyrvll eldlinmpta ywgvgydnai nsanketytr qtvafqpkim frvrpniyig
      181 agysfqydna tklergadsk latdpngprv mssgvsghfs ydtrdfipnp ykgesllvna
      241 tvyrrylgsd tdlenleita nkyfrmrerd vlaldiygnf nwgdvpwdmm atlgnnkrmr
      301 gyflgqyrdr amasiqaeyr whivgrqgmv fwigtgaiap npgaltsahw lpnagigyrf
      361 efkprvnvrf dagvgrntkg vyfqineaf
//
LOCUS       WP_257993474            1434 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Cupriavidus pauculus].
ACCESSION   WP_257993474
VERSION     WP_257993474.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus pauculus
  ORGANISM  Cupriavidus pauculus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
REFERENCE   1  (residues 1 to 1434)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1434
                     /organism="Cupriavidus pauculus"
                     /db_xref="taxon:82633"
     Protein         1..1434
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=154224
     Region          26..711
                     /region_name="GAF"
                     /note="GAF domain [Signal transduction mechanisms];
                     COG2203"
                     /db_xref="CDD:441805"
     Region          346..583
                     /region_name="KdpD"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; COG2205"
                     /db_xref="CDD:441807"
     Region          633..>775
                     /region_name="OmpR"
                     /note="DNA-binding response regulator, OmpR family,
                     contains REC and winged-helix (wHTH) domain [Signal
                     transduction mechanisms, Transcription]; COG0745"
                     /db_xref="CDD:440508"
     Region          780..846
                     /region_name="PAS"
                     /note="PAS domain; smart00091"
                     /db_xref="CDD:214512"
     Region          814..1278
                     /region_name="PRK13557"
                     /note="histidine kinase; Provisional"
                     /db_xref="CDD:237425"
     Region          1318..1418
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(1410..1413,1415)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 minadggvps tnfdgaalgf lagtgemaal irqfdwhttp lgppaqwpqs lktairimlt
       61 srqpiwigwg pdllffyndp ykaiiggkhp valgrptaev whelwpdigp llatamagte
      121 gtfveqklli merngypeet yytfsyspvp ddhggtggii cansddterv vaerqlnllr
      181 elatsatnar sgvdasrlav salqvnawdi pfallyvger gaetlglrgs agivgdhpaa
      241 pqtldvddpl aawpagaamr tgtpvrvddp gsrfavplpr gawqmapraa vvlpvqlsge
      301 smpsgvlvvg lnpcrllgdr yrafldlvvg qisqaisyan ayeeerrrae alaeidrakt
      361 tffsnishef rtpltlmlgp leemlhrrdv pdddralaei ahrngqrllk lvnalldfsr
      421 ieagrvqmyp qptdlaafta dlaslfrsav esagmrlevd cpplpaavav dremwesvvl
      481 nllsnafkyt ytgaiavkle gldsgevtlc vsdtgigiaa eevprlferf hrvagavgrs
      541 iegsgiglam vqelvrlhgg ridvqsvpdk gsrfcvtlpr easlaepatt paatsarala
      601 yvdaarrwvp gaddvpapqt iedmagaeaa dvrgrllvad dnvdlrnymh rilqsaghqv
      661 hvaadgqeal dmarriapdl ivsdvmmprl dgfgllrgvr ddaalrqtpv lllsaragee
      721 arvgglasga ddylikpfna rellarvasn lrlsqlrrqa qrelqnmnds lerrvaesva
      781 drdrlwelsd dllmvigadg mlervspswq rvlghaadvv igrscmvlvh pedlvavteq
      841 mialqqegvs vryecrmlca dgaecwmawt laidpangri hgvgrdvtgd kaaaqalrha
      901 dealrmaqkm eaigkltggv ahdfnnllqv iggnlhllsg dvagddrset rvrnalagva
      961 rgaklasqll afgrrqplap kvvnlgrfvr glddmlrral gdgveietvi gaglwntlid
     1021 pfqvenalln lainardamn ghgrltveag nasiddvyar rnadvapgqy vmlavsdtga
     1081 gmppeiqeqv fepffttkpe gqgtglglsm vygfvrqsgg hvkiysevgv gttvrlylpr
     1141 adepedleve iddgpasggt etvlvvedde nvratvveml sglgyrvlka rdatsalaiv
     1201 esgvpidllf sdvvmpgplr stemarkvrq rlpgiavlft sgytdnavmh tgrldagiel
     1261 lskpytheal arkvrqmlvs ggarlepada apvlamdgvp avaamdgmai grprhqrvvf
     1321 vedddllras taelmrtlgi dviearndae amvalggdgi dllltdvglg gvsgvdlaid
     1381 acrlrpalrv ifvsgyevvl tpaqrdalpn avmlrkpyal tdfinllqsr pegg
//
LOCUS       WP_257993612             537 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Cupriavidus pauculus].
ACCESSION   WP_257993612
VERSION     WP_257993612.1
KEYWORDS    RefSeq.
SOURCE      Cupriavidus pauculus
  ORGANISM  Cupriavidus pauculus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Cupriavidus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Cupriavidus pauculus"
                     /db_xref="taxon:82633"
     Protein         1..537
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=56943
     Region          36..430
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(40..41,44..45,48,79,129..130,132..134,137,158,
                     161..162,165,291,294..295,298..300,303,331,335,388..389,
                     393,397,413,416..417,420..421,424)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 masdsghvqg eaqsgskgqv lpfresllam lgiafvvmlv aldqtvvata lptvvaelqg
       61 fefyawvata ylltsvvtvp ifgrlgdyyg rkpfvlasiv vfliasvlcg massmpylva
      121 aralqgiggg mlvgtafacv pdlfpdshvr lrwqvilsta fglanalgps lggvltewyg
      181 wravfyinvp vgllglliaw rylphlrqpr hegpvridwl galliaaglg slqlsvewlp
      241 drgfdivtig lmvlscasfv alwqwsrrce apilpldmfr npalaplfll gvlggfamfa
      301 lllyapllfq ggfgyspkea gllvtplvvc itvgsivngr iitripqpns mlyagfamla
      361 lallglsqat rsmhhnvlla imlcaglglg fvlpnltvfa qqtagrshlg iatamlqslr
      421 mvggmvgtal vgtlvtrsyt agvtaslasa nasdwasklt dpqilidkaa qaellthlqk
      481 aghngallle qarvslvsai hlglllaava aligiwrvrr vppirlarvh epamaad
//
LOCUS       WP_257993664              49 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Dolosicoccus paucivorans].
ACCESSION   WP_257993664
VERSION     WP_257993664.1
KEYWORDS    RefSeq.
SOURCE      Dolosicoccus paucivorans
  ORGANISM  Dolosicoccus paucivorans
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Aerococcaceae; Dolosicoccus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13751.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..49
                     /organism="Dolosicoccus paucivorans"
                     /db_xref="taxon:84521"
     Protein         <1..49
                     /product="transposase"
     Region          <1..47
                     /region_name="transpos_IS1182"
                     /note="IS1182 family transposase; NF033551"
                     /db_xref="CDD:468080"
ORIGIN      
        1 rrkidvepaf gflkaclgft qfhvrgidka kqeiglalla anlrklalc
//
LOCUS       WP_257993883             183 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_257993883
VERSION     WP_257993883.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 183)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..183
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <9..178
                     /region_name="PRK10082"
                     /note="hypochlorite stress DNA-binding transcriptional
                     regulator HypT"
                     /db_xref="CDD:182228"
ORIGIN      
        1 gytdrknktf hvesinvnda vfnlkegksd filsfyneel mnypfinhki fdsylhlvsp
       61 cdehgrplfh lhrgvlplmk yandsymgrq vnqvidrtpe itfsltfvss msellkrmil
      121 ngdgvgwlpq ysiqreldeg rltildesls lpigawlyrs gsrlnqaaer fwqhiktrne
      181 pre
//
LOCUS       WP_257993894              50 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257993894
VERSION     WP_257993894.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..50
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..50
                     /product="phosphopantetheine-binding protein"
     Region          <1..50
                     /region_name="AcpA"
                     /note="Acyl carrier protein/domain [Lipid transport and
                     metabolism, Secondary metabolites biosynthesis, transport
                     and catabolism]; COG3433"
                     /db_xref="CDD:442659"
ORIGIN      
        1 enlidyglds vrmmalaacw rkvhgdidfv mlaknptida wwalltrevq
//
LOCUS       WP_257993961             118 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6402 family protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_257993961
VERSION     WP_257993961.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 118)
  AUTHORS   Zhou,Q., Grundmann,F., Kaiser,M., Schiell,M., Gaudriault,S.,
            Batzer,A., Kurz,M. and Bode,H.B.
  TITLE     Structure and biosynthesis of xenoamicins from entomopathogenic
            Xenorhabdus
  JOURNAL   Chemistry 19 (49), 16772-16779 (2013)
   PUBMED   24203528
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039427.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19940.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..118
                     /product="DUF6402 family protein"
     Region          <1..118
                     /region_name="DUF6402"
                     /note="Family of unknown function (DUF6402); pfam19940"
                     /db_xref="CDD:437772"
ORIGIN      
        1 ewygamgnst lkvcirgkts ksgseniftv dklgcylkdt ydfvdegktp eplgiwsknr
       61 ildktesaly mstylsgvwg vlardftgfv lvfnadfrkw qakhntggdf ivlsdvlw
//
LOCUS       WP_257993909             217 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257993909
VERSION     WP_257993909.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 217)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..217
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <1..215
                     /region_name="PRK07064"
                     /note="thiamine pyrophosphate-binding protein"
                     /db_xref="CDD:180820"
ORIGIN      
        1 grmwgdarwd sqlkaaveaa eqglrdqcga yaklndaiaq alpddgilvr ditvsgslwg
       61 srlfrahgpl mnihslagai gmglpmavgt aianpqrkvv glvgdgglsl nlgelatlaq
      121 ekanvtllim ndggygvmrg iqdkyfggrq yynelhtpdf tllaqamglq awsvdraedf
      181 qavmtealam pgpsvvevkm gqigalrfag ppqktly
//
LOCUS       WP_257994007              65 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase, partial [Klebsiella pneumoniae].
ACCESSION   WP_257994007
VERSION     WP_257994007.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 65)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 65)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>65
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          3..>61
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mdfylgidig tsrvkavlfd qhftacasaa entsprlsan gyaeqdmtql whsvlailhq
       61 iachp
//
LOCUS       WP_257994008             208 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_257994008
VERSION     WP_257994008.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..208
                     /product="ABC transporter substrate-binding protein"
     Region          <1..206
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 aagyvnlsdk ltfdqakarq llddagwkpa adgirskdgq rlaltvyesl pqpqnkevlq
       61 liaqqwrqvg valtvkagda gsrtldnldp qktpltvsev gradpdvvks mffpnnrdal
      121 lqkggssdkv qrfrddklnd lltgisaave pqqrlqltgd aqrylidnay vipifeepqv
      181 fagapwvkgv sfeavgrpsf ygawldkh
//
LOCUS       WP_257994022            1214 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6923 family protein [Corynebacterium ulcerans].
ACCESSION   WP_257994022
VERSION     WP_257994022.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium ulcerans
  ORGANISM  Corynebacterium ulcerans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046473.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21959.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1214
                     /organism="Corynebacterium ulcerans"
                     /db_xref="taxon:65058"
     Protein         1..1214
                     /product="DUF6923 family protein"
                     /calculated_mol_wt=129259
     Region          <1026..1213
                     /region_name="iso_D2_wall_anc"
                     /note="SpaH/EbpB family LPXTG-anchored major pilin;
                     NF033902"
                     /db_xref="CDD:468234"
ORIGIN      
        1 mnminesqpg nisarssvrv afraqafinf fvafsgilal aisiatvgsa pranaqtqei
       61 aaeqvtavag iqkqtfsvpl dtaatvdris lendalqgln tpifddtwgv tightevpfn
      121 sitwdlasgv wvasfppvva spgdevslnt pvstqwsegk mrvfgtitga stetsatsaa
      181 pqpldprsav esvspstids spnaktgsga taefssvvkq nssiagvgls fgealkeaan
      241 kievfaedad gtrklieqfe glqagaenak ltfgqlykis agqkivmsis ggsnfsdavp
      301 tgekgnpvgl qvygtpspqa lraavpmvag tpdlerlgsg nsaanlqngi ltistqkqgp
      361 gkvkelniht evagftssag wslkvgntvv dpgkyelrvd gddvyftfke sqeypggtkf
      421 tatgpwtgts wttgtmtlwg elppppsnny vnlrtssiqn crsngrnfff aatvteragv
      481 yvmsvylpdv ldlptdltns kiyvvagttn yangknftlt lngrylsatf sqkipvdrnk
      541 tftlyvptgl krgaytpcni qllgegaaap mptvcsstdr pvddtgmpmp wsgdaravsp
      601 rqpartltqe ekargtsvyv tastpnsqar nmsqlylqtq agtqfqkigd qtgwvvnala
      661 ynpkdnwlya vsqgrvgrht vkssdgryqy vpledpcfpa ghllqidpvs gqvynlgriv
      721 dpatrnsygi ggsynqpwpn dlwggvnsgf idangnywvt nsslsgsghf ykvdlssrva
      781 tttgsssarc gndeanycsr aedwtvlpds knnyawgikn gwaannrivl ermnmnngsl
      841 ttwditnlrt lagqpiptgh qwgkawtygn gnlgfgtasa gatsdvvqmk vtnpdsenpt
      901 felvsvdnta prsynsngts nglvpvevdl eatktfvkee ngriywkvev tnksllngss
      961 gfvlndtfeq gytnikment tgmqtsvhts gnsiqiifgp lpakssvsve isaqqppnmv
     1021 agcarntati igneldpetg nntttaeect diplkiqiqk vdannhaqml dakfelrepv
     1081 gdnvanyvpa qtgteiavna dgtsgtadvk tdkyyfliea kspsgysllp epmlmriekd
     1141 tvgnpivkfp kqvnafpvlt snikvdkgli tipiadvkes gtlpktggig vgmvallgla
     1201 ivgvglgigr ikry
//
LOCUS       WP_257994089             270 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1189 family protein [Aerococcus viridans].
ACCESSION   WP_257994089
VERSION     WP_257994089.1
KEYWORDS    RefSeq.
SOURCE      Aerococcus viridans
  ORGANISM  Aerococcus viridans
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Aerococcaceae; Aerococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018406.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06691.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Aerococcus viridans"
                     /db_xref="taxon:1377"
     Protein         1..270
                     /product="DUF1189 family protein"
                     /calculated_mol_wt=30942
     Region          2..264
                     /region_name="DUF1189"
                     /note="Protein of unknown function (DUF1189); cl23976"
                     /db_xref="CDD:474120"
ORIGIN      
        1 mfpihyikdi fspanifyhr ylmtwwksvl vmilwsimmt wpfvshfqsv edsavnnafe
       61 elhtiipdet asvlsnftye ngtfesdqtd ividgdqmql vilpsadnld gylkgndkll
      121 lilpdqfvyq tdqetrytan lplnfadyle dndalieslr vsyqtevntq srqilvmtrq
      181 ltifilglgg lllitsrlni lqknqfhdlf sfqyclgmva tamglpails iaigffmptv
      241 vimipilwig titmlylsyr qtkfirtdai
//
LOCUS       WP_257994418             198 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Brevibacterium paucivorans].
ACCESSION   WP_257994418
VERSION     WP_257994418.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium paucivorans
  ORGANISM  Brevibacterium paucivorans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02371.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Brevibacterium paucivorans"
                     /db_xref="taxon:170994"
     Protein         1..198
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=21877
     Region          <17..193
                     /region_name="COG3547"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442768"
ORIGIN      
        1 mgahgawlrr qrfdsllvqa afdeaydsvv titarrdrld ecitamaens pytdvvrrlg
       61 clrgistltg lglaveiggw srlsgnsigs ylglvpsens sgqsrslgpi nktgdgharr
      121 llvevarhhq hryvvgkmvr drwdlaspaa rargdlgnrr lnkrwmqfkk rkkpnnvana
      181 aiarelagwc wslavlee
//
LOCUS       WP_257994425             351 aa            linear   BCT 02-MAR-2025
DEFINITION  P1 family peptidase [Brevibacterium paucivorans].
ACCESSION   WP_257994425
VERSION     WP_257994425.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium paucivorans
  ORGANISM  Brevibacterium paucivorans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015535.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03576.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Brevibacterium paucivorans"
                     /db_xref="taxon:170994"
     Protein         1..351
                     /product="P1 family peptidase"
                     /calculated_mol_wt=34462
     Region          9..280
                     /region_name="DmpA_OAT"
                     /note="DmpA/OAT superfamily; composed of L-aminopeptidase
                     D-amidase/D-esterase (DmpA), ornithine acetyltransferase
                     (OAT) and similar proteins. DmpA is an aminopeptidase that
                     releases N-terminal D and L amino acids from peptide
                     substrates. This group represents...; cl00603"
                     /db_xref="CDD:469836"
     Site            order(111..113,181,183,233,272..273)
                     /site_type="active"
                     /note="active site pocket [active]"
                     /db_xref="CDD:238070"
     Site            232..233
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238070"
ORIGIN      
        1 mglaadfslt lpagvrmgca evpgglsgts vlllppgstv gvdsrgggpa thetnilapg
       61 tlgygadavv ltggsalgls aargvqdtla tssigceplp girvpivpaa avfdlgrgas
      121 qapdadtgaa atqaahgsdg acrgsvgagv gawtgrgfar ggtgvasvst segwrvtaiv
      181 tanpmgsifd srgqlyaagv lagygievpp vpaealgeqi eraqalnasv tnttiaclit
      241 dapltdaqvt rvaasahagl sraiypshtl fdgdtifaas vpaanadasq lndytspalt
      301 wlgaaaadam alacidavls adaqeewgpm aipavrqfap dtvsawesar n
//
LOCUS       WP_257994441             117 aa            linear   BCT 02-MAR-2025
DEFINITION  DoxX family protein [Brevibacterium paucivorans].
ACCESSION   WP_257994441
VERSION     WP_257994441.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium paucivorans
  ORGANISM  Brevibacterium paucivorans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024953.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13564.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Brevibacterium paucivorans"
                     /db_xref="taxon:170994"
     Protein         1..117
                     /product="DoxX family protein"
                     /calculated_mol_wt=12780
ORIGIN      
        1 mwvpsfwllp aflatvllad vmlsirpvrf irdclesvrl pedwwwvllv vkvfaaagli
       61 agiwipgvaf aanvgvvvyf lcavvahira ratgiafwln clgmltlssv ilvlsiv
//
LOCUS       WP_257994594             444 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein [Brevibacterium paucivorans].
ACCESSION   WP_257994594
VERSION     WP_257994594.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium paucivorans
  ORGANISM  Brevibacterium paucivorans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Brevibacterium paucivorans"
                     /db_xref="taxon:170994"
     Protein         1..444
                     /product="helicase-related protein"
                     /calculated_mol_wt=49386
     Region          <14..248
                     /region_name="BRR2"
                     /note="Replicative superfamily II helicase [Replication,
                     recombination and repair]; COG1204"
                     /db_xref="CDD:440817"
ORIGIN      
        1 mksdaiqelv dfskgvvher fqlaefakrg vafhygdmpl vlkakvvelf krgeirflvc
       61 tstllegvnl pcrnlflrap rkgprkhmpm pdfwnlagra grwgtefqgn vfcvdtsdak
      121 awpekpgrre rssivpaaaa tlsnvanvie yidrgaread ratspelesa fnwlvgrfls
      181 dgnligmhgv alnaedtdri aealgrvaps lrirsalvkk hagisptsmq rlldavlang
      241 hpeelalvpp tsddafdeyk ialdyvaeyl ggpfeperrr lslsrlivhw mrgvplsvii
      301 dnrarwqrdq gkevsypsli rqvmadveei arfeapryls cyadvvaqaa gelgrqinvd
      361 avdiemmlef gvprltdmsf isiglsratt raiaellldp alspadctaw ienvdveqle
      421 lpafaareim ahrqllserr grar
//
LOCUS       WP_257994609              58 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Brevibacterium
            paucivorans].
ACCESSION   WP_257994609
VERSION     WP_257994609.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium paucivorans
  ORGANISM  Brevibacterium paucivorans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..58
                     /organism="Brevibacterium paucivorans"
                     /db_xref="taxon:170994"
     Protein         <1..>58
                     /product="ABC transporter substrate-binding protein"
     Region          2..>58
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 eykpgtseir egiaesadfv kpdeyevklk kdlkfangnd ltasdvkfsf erqtkiqd
//
LOCUS       WP_257994610              85 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Brevibacterium
            paucivorans].
ACCESSION   WP_257994610
VERSION     WP_257994610.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium paucivorans
  ORGANISM  Brevibacterium paucivorans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Brevibacterium paucivorans"
                     /db_xref="taxon:170994"
     Protein         <1..>85
                     /product="ABC transporter substrate-binding protein"
     Region          <1..>84
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 aaleekgdnf gdspvcvgpf kfekrvaqtl ikvvrdpnyy dadkihldsi tyrimtdani
       61 raanirsgdv qvadtispqd vdaln
//
LOCUS       WP_257994631             199 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein, partial [Brevibacterium
            paucivorans].
ACCESSION   WP_257994631
VERSION     WP_257994631.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium paucivorans
  ORGANISM  Brevibacterium paucivorans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
REFERENCE   1  (residues 1 to 199)
  AUTHORS   Gao,G., Nara,T., Nakajima-Shimada,J. and Aoki,T.
  TITLE     Novel organization and sequences of five genes encoding all six
            enzymes for de novo pyrimidine biosynthesis in Trypanosoma cruzi
  JOURNAL   J Mol Biol 285 (1), 149-161 (1999)
   PUBMED   9878395
REFERENCE   2  (residues 1 to 199)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
REFERENCE   3  (residues 1 to 199)
  AUTHORS   Nygaard,P., Duckert,P. and Saxild,H.H.
  TITLE     Role of adenine deaminase in purine salvage and nitrogen metabolism
            and characterization of the ade gene in Bacillus subtilis
  JOURNAL   J Bacteriol 178 (3), 846-853 (1996)
   PUBMED   8550522
REFERENCE   4  (residues 1 to 199)
  AUTHORS   Lollier,M., Jaquet,L., Nedeva,T., Lacroute,F., Potier,S. and
            Souciet,J.L.
  TITLE     As in Saccharomyces cerevisiae, aspartate transcarbamoylase is
            assembled on a multifunctional protein including a
            dihydroorotase-like cryptic domain in Schizosaccharomyces pombe
  JOURNAL   Curr Genet 28 (2), 138-149 (1995)
   PUBMED   8590465
REFERENCE   5  (residues 1 to 199)
  AUTHORS   Jabri,E., Carr,M.B., Hausinger,R.P. and Karplus,P.A.
  TITLE     The crystal structure of urease from Klebsiella aerogenes
  JOURNAL   Science 268 (5213), 998-1004 (1995)
   PUBMED   7754395
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01979.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Brevibacterium paucivorans"
                     /db_xref="taxon:170994"
     Protein         <1..199
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
     Region          <2..189
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
ORIGIN      
        1 pdayvdliid qmipraaqeg lakwidvfce egafdiaqtr riveaglahg lkprlhanql
       61 sdmgaialaa evgavsadha tfvsdedlar iaeagtvltl lpsiefstrq pypnvrryhe
      121 agvtvaiasd cnpgsgfsns ipfcmaiavr dmhftveqal wsataggara lqrtdvgalt
      181 vgsradfsip spftckelp
//
LOCUS       WP_257994639              99 aa            linear   BCT 02-MAR-2025
DEFINITION  enoyl-CoA hydratase-related protein, partial [Brevibacterium
            paucivorans].
ACCESSION   WP_257994639
VERSION     WP_257994639.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium paucivorans
  ORGANISM  Brevibacterium paucivorans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012596.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00378.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Brevibacterium paucivorans"
                     /db_xref="taxon:170994"
     Protein         <1..>99
                     /product="enoyl-CoA hydratase-related protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..>65
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     Site            order(8,51)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
ORIGIN      
        1 ervfsagndl gdfqntpaea glsrpvfrfl htlavfpkpl vaavcgpavg igttmllhcd
       61 lvyagtkrpe vlrkeileri ehegqtfsam lhepaarea
//
LOCUS       WP_257994642              88 aa            linear   BCT 02-MAR-2025
DEFINITION  metal ABC transporter permease, partial [Brevibacterium
            paucivorans].
ACCESSION   WP_257994642
VERSION     WP_257994642.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium paucivorans
  ORGANISM  Brevibacterium paucivorans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013143.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00950.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Brevibacterium paucivorans"
                     /db_xref="taxon:170994"
     Protein         1..>88
                     /product="metal ABC transporter permease"
                     /GO_component="GO:0005886 - plasma membrane [Evidence
                     IEA]"
                     /GO_component="GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          29..>88
                     /region_name="ZnuB"
                     /note="ABC-type Mn2+/Zn2+ transport system, permease
                     component [Inorganic ion transport and metabolism];
                     COG1108"
                     /db_xref="CDD:440725"
ORIGIN      
        1 mweidteeng saeqltrlis klkevevpml vdviahsvlp givvgyfitr nfdsplliig
       61 salagllvvl gaewltrtgl ftgdapqg
//
LOCUS       WP_257994644              70 aa            linear   BCT 02-MAR-2025
DEFINITION  rhodanese-like domain-containing protein, partial [Brevibacterium
            paucivorans].
ACCESSION   WP_257994644
VERSION     WP_257994644.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium paucivorans
  ORGANISM  Brevibacterium paucivorans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
REFERENCE   1  (residues 1 to 70)
  AUTHORS   Gliubich,F., Gazerro,M., Zanotti,G., Delbono,S., Bombieri,G. and
            Berni,R.
  TITLE     Active site structural features for chemically modified forms of
            rhodanese
  JOURNAL   J Biol Chem 271 (35), 21054-21061 (1996)
   PUBMED   8702871
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00581.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Brevibacterium paucivorans"
                     /db_xref="taxon:170994"
     Protein         <1..70
                     /product="rhodanese-like domain-containing protein"
     Region          <1..>66
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            11
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238089"
ORIGIN      
        1 eykdrpvvty ctggircevl svlmknrgfn evyqldggiv rygetygnsg lwdgslyvfd
       61 krmhmdrrrr
//
LOCUS       WP_257994679             139 aa            linear   BCT 02-MAR-2025
DEFINITION  aconitase family protein, partial [Brevibacterium paucivorans].
ACCESSION   WP_257994679
VERSION     WP_257994679.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium paucivorans
  ORGANISM  Brevibacterium paucivorans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012550.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00330.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Brevibacterium paucivorans"
                     /db_xref="taxon:170994"
     Protein         <1..>139
                     /product="aconitase family protein"
     Region          1..>139
                     /region_name="PRK09277"
                     /note="aconitate hydratase AcnA"
                     /db_xref="CDD:236445"
ORIGIN      
        1 levgdksyei yrlsavddsd klpfslkvll enllrtedga nitedhikal aswdpkaeps
       61 veiqftparv vmqdftgvpc ivtdshttmv nglgvlgwgv ggieaeaaml gqpvsmlipr
      121 vvgfklkgei psgvtatdv
//
LOCUS       WP_257994699             129 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein, partial [Brevibacterium
            paucivorans].
ACCESSION   WP_257994699
VERSION     WP_257994699.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium paucivorans
  ORGANISM  Brevibacterium paucivorans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
REFERENCE   1  (residues 1 to 129)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 129)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 129)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Brevibacterium paucivorans"
                     /db_xref="taxon:170994"
     Protein         <1..>129
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
     Region          <5..73
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Region          <66..120
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
ORIGIN      
        1 emmqlrvlst qvagsdapdp rssilklrgs elqqditell mdivapqgmd fvdsaqpylp
       61 tvilgagdyl ktreqfgvpi gvfqalqhra adayakleea ksmalyskla ieadtdgtsk
      121 trhadvlaa
//
LOCUS       WP_257994704             517 aa            linear   BCT 02-MAR-2025
DEFINITION  AI-2E family transporter [Micrococcus lylae].
ACCESSION   WP_257994704
VERSION     WP_257994704.1
KEYWORDS    RefSeq.
SOURCE      Micrococcus lylae
  ORGANISM  Micrococcus lylae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Micrococcus.
REFERENCE   1  (residues 1 to 517)
  AUTHORS   Rettner,R.E. and Saier,M.H. Jr.
  TITLE     The autoinducer-2 exporter superfamily
  JOURNAL   J Mol Microbiol Biotechnol 18 (4), 195-205 (2010)
   PUBMED   20559013
REFERENCE   2  (residues 1 to 517)
  AUTHORS   Herzberg,M., Kaye,I.K., Peti,W. and Wood,T.K.
  TITLE     YdgG (TqsA) controls biofilm formation in Escherichia coli K-12
            through autoinducer 2 transport
  JOURNAL   J Bacteriol 188 (2), 587-598 (2006)
   PUBMED   16385049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013740.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01594.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Micrococcus lylae"
                     /db_xref="taxon:1273"
     Protein         1..517
                     /product="AI-2E family transporter"
                     /calculated_mol_wt=56045
     Region          50..373
                     /region_name="PerM"
                     /note="Predicted PurR-regulated permease PerM [General
                     function prediction only]; COG0628"
                     /db_xref="CDD:440393"
     Region          <375..>493
                     /region_name="tolA"
                     /note="cell envelope integrity inner membrane protein
                     TolA; Provisional; PRK09510"
                     /db_xref="CDD:236545"
ORIGIN      
        1 mneatfsard daahdhrvpg ashpagdrar rqrirfiese wntsrphrlw prmlvlvlia
       61 aglvitvefv qglsqiiapv flglnfvvvv ypvqawltrr glhpvfgatv svllvaavfc
      121 afvgllfwsi lelvdalpqy tgevqalvvd vsdqliawgl speavqqqvn gidwkdvsga
      181 avstltaiat ntwavfglll tvvmsmffla mdsmgverrv hllntardel gdaliafaqg
      241 vrrywlvttv fglivaildv valviigvpl alvwgvfsfl tnyipnigfv iglippallg
      301 lveggwpaff avvisysvln fvlqsiiqpk vagdavgvip tvsfisllfw awvlgplgai
      361 lalpatllvk ailidadpha rwlnvfiaad lkgmerfhlp kllqrrqkeq kakdkavaea
      421 aekervaatd gaegqahpek ervaaqaeeh rvdaqkdwma aeqeavassp dtpvqpvaeg
      481 vapaetdaat hadlrrgtel edhvirdvdd dpgarkg
//
LOCUS       WP_257994706             182 aa            linear   BCT 02-MAR-2025
DEFINITION  TetR family transcriptional regulator [Micrococcus lylae].
ACCESSION   WP_257994706
VERSION     WP_257994706.1
KEYWORDS    RefSeq.
SOURCE      Micrococcus lylae
  ORGANISM  Micrococcus lylae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Micrococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012655.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00440.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Micrococcus lylae"
                     /db_xref="taxon:1273"
     Protein         1..182
                     /product="TetR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=19126
     Region          13..>105
                     /region_name="PRK13756"
                     /note="TetR family transcriptional regulator"
                     /db_xref="CDD:172294"
ORIGIN      
        1 mtsapdaprp rgrltvdevv daavtilqdf gmgdlsmrrv agvlgvqasa lywhvpnkqt
       61 llarvadriv advertvrah rledleelts aaeavllrhr dgadvvlssl alglggsalh
      121 rmfvetapdp gsgeralagm lgaaalrqqr eqaaalgvel gpdcqaharr grsdqaeraa
      181 pg
//
LOCUS       WP_257994729              62 aa            linear   BCT 02-MAR-2025
DEFINITION  amphi-Trp domain-containing protein, partial [Brevibacterium
            paucivorans].
ACCESSION   WP_257994729
VERSION     WP_257994729.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium paucivorans
  ORGANISM  Brevibacterium paucivorans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040111.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20068.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..62
                     /organism="Brevibacterium paucivorans"
                     /db_xref="taxon:170994"
     Protein         1..>62
                     /product="amphi-Trp domain-containing protein"
     Region          <1..54
                     /region_name="Amphi-Trp"
                     /note="Amphi-Trp domain; cl17151"
                     /db_xref="CDD:450158"
ORIGIN      
        1 mtlgtgdnal amdlpgtfrt tmevtdsrkr rgiereleie idwyvdengk piaeagpasg
       61 ft
//
LOCUS       WP_257994745              67 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase, partial [Brevibacterium paucivorans].
ACCESSION   WP_257994745
VERSION     WP_257994745.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium paucivorans
  ORGANISM  Brevibacterium paucivorans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
REFERENCE   1  (residues 1 to 67)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 67)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Brevibacterium paucivorans"
                     /db_xref="taxon:170994"
     Protein         1..>67
                     /product="aldo/keto reductase"
     Region          7..>67
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
ORIGIN      
        1 msentqmqyn rlgraglkvs elsfgswvtf gdsidtglak ecmqtaaeag vnffdnaevy
       61 aggksee
//
LOCUS       WP_257994750              78 aa            linear   BCT 02-MAR-2025
DEFINITION  class I tRNA ligase family protein, partial [Brevibacterium
            paucivorans].
ACCESSION   WP_257994750
VERSION     WP_257994750.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium paucivorans
  ORGANISM  Brevibacterium paucivorans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020892.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09334.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Brevibacterium paucivorans"
                     /db_xref="taxon:170994"
     Protein         1..>78
                     /product="class I tRNA ligase family protein"
                     /GO_function="GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /GO_function="GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
     Region          <14..>78
                     /region_name="PRK11893"
                     /note="methionyl-tRNA synthetase; Reviewed"
                     /db_xref="CDD:237012"
ORIGIN      
        1 mphellhdhg dclhffrlsa yqdkllklye ehpeyvgpdt rrnevigfvs qglqdlsisr
       61 ttfdwgvpvp gddkhvmy
//
LOCUS       WP_257994936              87 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding enzyme [Varibaculum cambriense].
ACCESSION   WP_257994936
VERSION     WP_257994936.1
KEYWORDS    RefSeq.
SOURCE      Varibaculum cambriense
  ORGANISM  Varibaculum cambriense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Actinomycetales; Actinomycetaceae; Varibaculum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024591.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13193.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Varibaculum cambriense"
                     /db_xref="taxon:184870"
     Protein         1..87
                     /product="AMP-binding enzyme"
                     /calculated_mol_wt=9241
     Region          <1..59
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
ORIGIN      
        1 mlarmegvqs ayvvgvpdmk wgeavnavlv medgyatpsl sevrafagry larfevpqrv
       61 svvvslpvss ngkatvsalr avfthqd
//
LOCUS       WP_257994958            2955 aa            linear   BCT 02-MAR-2025
DEFINITION  mucin-binding protein, partial [Streptococcus oralis].
ACCESSION   WP_257994958
VERSION     WP_257994958.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus oralis
  ORGANISM  Streptococcus oralis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 2955)
  AUTHORS   MacKenzie,D.A., Tailford,L.E., Hemmings,A.M. and Juge,N.
  TITLE     Crystal structure of a mucus-binding protein repeat reveals an
            unexpected functional immunoglobulin binding activity
  JOURNAL   J Biol Chem 284 (47), 32444-32453 (2009)
   PUBMED   19758995
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17966.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..2955
                     /organism="Streptococcus oralis"
                     /db_xref="taxon:1303"
     Protein         <1..2955
                     /product="mucin-binding protein"
ORIGIN      
        1 kyirygirky sfgaasvaia aglmflgnga vsaieqnpvs dskeniqkve nsspelgesn
       61 iqlvdktiet pkkeelkvnk slletsisnl eavlsnakya dasvvanvre alatakavla
      121 neaakqeevn vqkeilsalg tvvtesnklg lekeqadkdk vakeeaqrna tptekvlsea
      181 ksaldkvsse advtntlaat elrkkevaae nraaieaava knqavidesk illadksvtk
      241 eqvdaqlarl nesilavyse lkkagigrdg klavalaaqd fyaeestntt hasdinatvy
      301 tgtdtytiph keikptpagv ntaglevvvy snqrdgadkn agnaqttagg grtghnnkgr
      361 vdypltpeas kklveeaplw rnklradgst iadrataiys adggyeylat eiykygyeqg
      421 idrvyirglk driavteaak kagwsltsik ptnmvpglay deatdtiqgv vssdiengvy
      481 dlrfnitatn tdgrsvtfql qnlrmgwvgw qdttppkies dsaryertvg ddaninvriy
      541 dnagsgvipk gssgdydytt aegkvikvrk qnspavtgvs gynttgatld dskvlipgtn
      601 yslsnssrae qandrtnngn aiiggkvtea giytvsvyak dydklskrtt wnqsgqeaha
      661 sitvvvkpkv evqnvetyst tvpvkisrga tsakvtmpdg tvtnlkvvng kwrvdsgstn
      721 ravtenqelg svdsdtifni pvtseatakv gvdnitveas senvkgtflr eqveltgtdn
      781 kkhtaklnsa tghwelpady aevktpngdg tttwikrqvy teaqqdgamk fyiyeytrkl
      841 yingkvisvt tperplteya skntsqagdg msvtitydkh sntwtssdgt evtatklgdd
      901 swevltksgf ggiirgtiat nsdvatvvnt kptassqdyt stkgttvdlr neakaavtis
      961 dtedtkygkt tyitritvts psgvqkvydt kqdannynla sgytlnevgv ytvtvdvids
     1021 ngnyttdati ggtesgvdhg agsstattty hitvtdtieg hdatssdiqg atqtgtptft
     1081 svgdgstisp satspaklva adgslvdtlp vanegtytid petgvvnfkp lptftgpasp
     1141 vtvkltailg tdtnnanite tatatytptv vpvkptavas qttgpqgkaq tsaikfdaad
     1201 tddttvnfak gtvaidantt ksvdlntasv tllnangdav tsvtvenegt ytldtatnvi
     1261 tfqpvatftg tvtkpvsvri adangttvtt tytptvtdvt mtaenatstd vqgktqtgtp
     1321 efetsdssvt iakrqlldpt tlqpttsvti anegtytidp ttgvvtfvpv ptftgegtgv
     1381 tvqatdsnge iataaykptv tpititgesv tskniqgeqq setplfsssy ksapvsnykl
     1441 vdpttgnptt etsvtvenvg tytidsttgk vtfqpvatyt gtpapvtvqa satitnekde
     1501 stvitgtaty tptvvpvapt akesatagkq gqaqtsqivf dipdtdattl nfakgetsev
     1561 lgedgqpksv aldkstltll dangnavttv tvdgegtytl dkttnvitfq pteeftgkat
     1621 pvrvqiadin gttvttnytp tvvaedgtvi veykdeegni ispsttpann ekvttpftte
     1681 pkeipgytlv kvettngtvd egtkkvsgkv tneqttvtyt yrknvqtati syydvttgae
     1741 vaidsakvpa aavetvegvy ngaidftnre kaiaalekag ytlvedgfiv attadklfdn
     1801 dtavnqnftv tvkqrvepvt pndekpvpgq pvdpenpnsp vwpstaesle ltktvtrtik
     1861 yryndengke vtadkvqtvt ftrsasinlv tgnveytdws aaqtleavvs pevanythdk
     1921 ktvtslevtn estdstvyvi ytpvaptttp atstdiqgkt qtgtptykha dgtelkpttd
     1981 npakfvgtee ttipatkdgk tvgtytidpt gtvtftpnkd fvgtpdpakv vvtdptngtt
     2041 vessytptvt pvtptgvdts stgpkntpqs gtptfvpghk dvpmdntvpa tfedgttskt
     2101 vpnegtytvd atgkvtftpn kdfvgtatgv tivrkdtngt vakakyiptv yevksdtqva
     2161 tvtykdtngt ilgevdilqg dsgsemnyst aerinalkkl gyelvsdeft kadgskqsfd
     2221 ndtkaiqkfv vtvqprlvpv ipsdvtpvpg qpidpedpns pvwpesvkel ttseevtrti
     2281 tyvdgdgkev ttsvtssvkf trdakvnlvt gevtygewke attdvlsgnk lplvkgyial
     2341 sgdieastkd qtvkaedkdi iqkvvykklg awipnvpgqt nppridypnd pngdptkpgv
     2401 ptedivipyv pgyiprdkdg nplkpvdped ptkgyvpptl ptdpsqdtpi nytkittsyv
     2461 tvdpngkevs ipnypredge qpkkdipgyr fvetkklpng dtehvyekvs tffkdkegne
     2521 ipnypsepgt vdkkdipeyr fvetkklpng dvehvyekvn tffkdkegne ipkypsepgt
     2581 vdkkdipeyr fvetkklpng dtehiyekvn tffkdkegne ipkypsepgt vdkkdipeyr
     2641 fvetkklpng dvehvyekvt tffkdkdgne ikekesgsvd kkdipeyrfv etkklpngdt
     2701 ehvyekvttf fkdkdgneik ekesgsvdkk dipeyrfvet kklpngdveh vyekvntffk
     2761 dkdgneikek esgsvdkkdi peyrfvetkk lpngdiehvy ekvtppaptp spvpqpnpgk
     2821 qntttwtden gnplkptepg skepgripgy eyvktvtgsn gnirhifrkv emptptpvep
     2881 vqpvspkepe tpeqpvtpem ptvpeqpkqp ttpkyvdgqk elpntgtean aslaalgllg
     2941 alsgfgllar kkked
//
LOCUS       WP_257994962             391 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Brevibacterium luteolum].
ACCESSION   WP_257994962
VERSION     WP_257994962.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium luteolum
  ORGANISM  Brevibacterium luteolum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Brevibacterium luteolum"
                     /db_xref="taxon:199591"
     Protein         1..391
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=40503
     Region          11..386
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(21..22,25..26,29,61,111..112,114..116,119,138,
                     141..142,145,219,222..223,226..228,231,258,262,311..312,
                     315,319,336,339..340,343..344,347)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mkssaayvlv vigivaagfn lrpgvtglsp lldmmaqplg vtaaflavig mlpplifgia
       61 gfltprltir wgavsvisla miviaaglai rsatgspvvf lllsafalig mgvgnvvipp
      121 lvkgffptri glfstihvaa lqfgtfippv lavplaqglg wrgslavwsl aaavpaviwl
      181 llwirrvspe aapstpvvss grylelfrss rawalmlmtg itsfnnfilf twlplifvra
      241 gqsesfggam lslvtaipfv lglvlpmfae rvrspvavvl afsaclaagy lglwlapaaa
      301 pvlwtvllgl gistfplalt lislrssste saaalsgfvq glgyclaaag plifgfliqs
      361 tviwpafalv lgsvmvkafv aaracqpgai s
//
LOCUS       WP_257994981             421 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Brevibacterium luteolum].
ACCESSION   WP_257994981
VERSION     WP_257994981.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium luteolum
  ORGANISM  Brevibacterium luteolum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
REFERENCE   1  (residues 1 to 421)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Brevibacterium luteolum"
                     /db_xref="taxon:199591"
     Protein         1..421
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=45213
     Region          13..240
                     /region_name="EAL"
                     /note="EAL domain. This domain is found in diverse
                     bacterial signaling proteins. It is called EAL after its
                     conserved residues and is also known as domain of unknown
                     function 2 (DUF2). The EAL domain has been shown to
                     stimulate degradation of a second...; cl29561"
                     /db_xref="CDD:453023"
     Region          <315..381
                     /region_name="DICT"
                     /note="Sensory domain in DIguanylate Cyclases and
                     Two-component system; cl46778"
                     /db_xref="CDD:481118"
ORIGIN      
        1 mlstpadvsa sgeieglirh glvnsyfapv aeassyetvg yivlparadg dagndrdrid
       61 efaalradvr tcgmigdfds slrsialrda asaglgastr lflgaepesl vtledrtdep
      121 ersvilqldp griagapaav lrsvrqarql gwgigmksig pdlrtaaflp lvnpsvvslh
      181 pdvlhmedrg elaelirllr ahvertdavv iaegvatead mrqvraigar yvtgpligap
      241 teapspvdkl yddplvdhft rnrlvqgtpf sickslkhdp limdealvgs eleslqrral
      301 ngsssiviig iygeqedvwe dtaerfasiq qvcgfsamls ggfdvapvpg vrsgridhsd
      361 plrneygliv vgpdwsgmvt asrkndpgpe grvefdvyit tdryacidaa ravltrvnse
      421 r
//
LOCUS       WP_257995077              79 aa            linear   BCT 02-MAR-2025
DEFINITION  integrase core domain-containing protein [Brevibacterium luteolum].
ACCESSION   WP_257995077
VERSION     WP_257995077.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium luteolum
  ORGANISM  Brevibacterium luteolum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025063.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13683.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Brevibacterium luteolum"
                     /db_xref="taxon:199591"
     Protein         1..79
                     /product="integrase core domain-containing protein"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=8765
     Region          <1..72
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 mgsrgdsydn amaealnsvy kaelidrkaw sglievmaet skwvawynqt rlhsaighrp
       61 pfevhsewin qsttelaaa
//
LOCUS       WP_257995074             670 aa            linear   BCT 02-MAR-2025
DEFINITION  hydantoinase B/oxoprolinase family protein [Brevibacterium
            luteolum].
ACCESSION   WP_257995074
VERSION     WP_257995074.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium luteolum
  ORGANISM  Brevibacterium luteolum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
REFERENCE   1  (residues 1 to 670)
  AUTHORS   Watabe,K., Ishikawa,T., Mukohara,Y. and Nakamura,H.
  TITLE     Cloning and sequencing of the genes involved in the conversion of
            5-substituted hydantoins to the corresponding L-amino acids from
            the native plasmid of Pseudomonas sp. strain NS671
  JOURNAL   J Bacteriol 174 (3), 962-969 (1992)
   PUBMED   1732229
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10000641
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Brevibacterium luteolum"
                     /db_xref="taxon:199591"
     Protein         1..670
                     /product="hydantoinase B/oxoprolinase family protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=72795
     Region          50..623
                     /region_name="HyuB"
                     /note="N-methylhydantoinase B/oxoprolinase/acetone
                     carboxylase, alpha subunit [Amino acid transport and
                     metabolism, Secondary metabolites biosynthesis, transport
                     and catabolism]; COG0146"
                     /db_xref="CDD:439916"
ORIGIN      
        1 mtttptdsgs mlsttpltge qleayiaaep inpaglprpy ehggrltpeg ttvdpiivei
       61 vegtlasvem evetaisrts rspmirdahd fragihdrql rkltgrsysa lvhpivrdfp
      121 ldtmeegdvf fhndvyeseg gighlpdlcv tvpvfhdgev vcfvqafghh ddiggacpgs
      181 mpsgatsvhe eglavppikl wsrgepnraa lrimtrnsrm pdslaadlda ecsaclmgar
      241 rlgelfsryg rdtieaafdt ildnttelyr reilskipdg qyvwedyaeh dgvedpklht
      301 qritltktst ggpgdgprli ldftgtaaqa rgpinhcgdy vggnflkkwl apilrnlads
      361 permgeldvn egivpliemr fpekgtlltp iypgptnart fvilrllgvl agvvakavdg
      421 kmpadqetir ytgvygkdrd gndylmrevl gggsggryya dgedtihvvp dsrnlpteft
      481 esrfpfrver lglavdsgga gryrgglgye khihmlkdah fmsiadrsil acwgvkggka
      541 grpfqvtidp ggpnereida ladaepvrag etirirttgg ggwgdpldrp ldeverdlrw
      601 gkvsidgars dygviasvdd gevtidtaas tqlrqqmrek rtgeepffdr gpgyarlagd
      661 gsdapavdwl
//
LOCUS       WP_257995152             949 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Brevibacterium luteolum].
ACCESSION   WP_257995152
VERSION     WP_257995152.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium luteolum
  ORGANISM  Brevibacterium luteolum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
REFERENCE   1  (residues 1 to 949)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Brevibacterium luteolum"
                     /db_xref="taxon:199591"
     Protein         1..949
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=98583
     Region          61..327
                     /region_name="PRK03204"
                     /note="haloalkane dehalogenase; Provisional"
                     /db_xref="CDD:179554"
     Region          400..943
                     /region_name="PRK09274"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:236443"
ORIGIN      
        1 mvrlpglslr pgssglparp astpgalpgw deqwsrlvtv gtvdgertfh vldtlpalqa
       61 eglapagtil alhgnptwsy lwrhlaaatl drargggpvw rviapdqlem gfserlshtg
      121 lptthgpgfr riaervadfd avvteltaec paertvtlgh dwggvlsltw aarnqdrida
      181 vislntavaq pegtpipapl qaalagpmlp lstvrtdwfl rttlalaqgs ltdaekdafr
      241 apyrtaelrg gigafvadip avethpsyae lqrlgddiag ielpalliwg pkdpvflerf
      301 lrdlrhrlpq adihrcekas hlvsedadva givldwlsaq fdapgqatgp aeatgasgaa
      361 ddqapataap ttsrmiydal aeraddeaia svdmsqrppq svswrqlsgv vdgiaaglqa
      421 rglapgdrvs llvtpgnnlt aaaygvlkag gtvvvadagl gvagmtrair sadpqwiige
      481 lpgltlarta gwpgrrisis plpaperlal nvetsltkli regrthlasg eslrtpapad
      541 laavlftsgs tgpakgvryt haqlaaltdv ltrtfdmrpg aglvagfapf alfgpglgvt
      601 svtpymsvtk prtltaaala davaeadctm vfaspaaytn vcatagdlte aqraacagve
      661 lalsagapvp lplmnqvaev fphaeihspy gmteglllad idrhavatae aegtartdga
      721 ddagpgaqaa rgvcvgtpid gvrfalapig adgrsadell tgtdaqqvlg efvvsaahik
      781 dgydrlwstd qqagrdtldg qrwhrtndig hidtagriwi egrlqhiitt pagplgpggi
      841 ealtdrdpav lrsaavgvgp tgtqalvlvl epaagsdpes geplapglap lpvaqrlraq
      901 vaavtgsdva avliapsfpt dirhnskidr srladwaaav lggepirkp
//
LOCUS       WP_257995126             101 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Streptococcus pneumoniae].
ACCESSION   WP_257995126
VERSION     WP_257995126.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 101)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 101)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 101)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 101)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         1..>101
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <7..>101
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            40..43
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213235"
     Site            92..101
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213235"
ORIGIN      
        1 mlflvflkli aglysqsyge vlingenivp erkipanlga lieepgfiny ysgfknlqyl
       61 asirgvvgnq eindtlkivg lyeqkdqkvk tyslgmrkkl g
//
LOCUS       WP_257995198             174 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-binding domain-containing protein [Bacillus safensis].
ACCESSION   WP_257995198
VERSION     WP_257995198.1
KEYWORDS    RefSeq.
SOURCE      Bacillus safensis
  ORGANISM  Bacillus safensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025114.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13738.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Bacillus safensis"
                     /db_xref="taxon:561879"
     Protein         1..174
                     /product="NAD(P)-binding domain-containing protein"
                     /calculated_mol_wt=19514
     Region          1..>161
                     /region_name="CzcO"
                     /note="Predicted flavoprotein CzcO associated with the
                     cation diffusion facilitator CzcD [Inorganic ion transport
                     and metabolism]; COG2072"
                     /db_xref="CDD:441675"
ORIGIN      
        1 mkknlpvvii gggpvgiaaa ahlikrnesf llfesgkqig nhfldyghvr lfspwefnid
       61 qaarellekh qiplpckdef plgkeivsqy lkpltelpem kphiylnspv lhigkkgvdk
      121 vktkdrdlvp fvirvklnnq eektyeakav idatgtwqnp npinaegimt enek
//
LOCUS       WP_257995275             217 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein, partial [Streptococcus
            pneumoniae].
ACCESSION   WP_257995275
VERSION     WP_257995275.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 217)
  AUTHORS   Aravind,L., Leipe,D.D. and Koonin,E.V.
  TITLE     Toprim--a conserved catalytic domain in type IA and II
            topoisomerases, DnaG-type primases, OLD family nucleases and RecR
            proteins
  JOURNAL   Nucleic Acids Res 26 (18), 4205-4213 (1998)
   PUBMED   9722641
REFERENCE   2  (residues 1 to 217)
  AUTHORS   Szafranski,P., Smith,C.L. and Cantor,C.R.
  TITLE     Cloning and analysis of the dnaG gene encoding Pseudomonas putida
            DNA primase
  JOURNAL   Biochim Biophys Acta 1352 (3), 243-248 (1997)
   PUBMED   9224947
REFERENCE   3  (residues 1 to 217)
  AUTHORS   Bergerat,A., de Massy,B., Gadelle,D., Varoutas,P.C., Nicolas,A. and
            Forterre,P.
  TITLE     An atypical topoisomerase II from Archaea with implications for
            meiotic recombination
  JOURNAL   Nature 386 (6623), 414-417 (1997)
   PUBMED   9121560
REFERENCE   4  (residues 1 to 217)
  AUTHORS   Versalovic,J. and Lupski,J.R.
  TITLE     The Haemophilus influenzae dnaG sequence and conserved bacterial
            primase motifs
  JOURNAL   Gene 136 (1-2), 281-286 (1993)
   PUBMED   8294018
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013878.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01751.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..217
                     /product="toprim domain-containing protein"
     Region          <1..212
                     /region_name="GyrB"
                     /note="DNA gyrase/topoisomerase IV, subunit B
                     [Replication, recombination and repair]; COG0187"
                     /db_xref="CDD:439957"
ORIGIN      
        1 lvegdsaggs akqgrdrkfq ailplrgkvi ntakakmadi lkneeintmi ytigagvgad
       61 fsiedanydk iiimtdadtd gahiqtlllt ffyrymrplv eaghvyialp plykmskgkg
      121 kkeevayawt dgeleelrkq fgkgatlqry kglgemnadq lwettmnpet rtlirvtied
      181 laraerrvnv lmgdkveprr kwiednvkft leeatvf
//
LOCUS       WP_257995103             807 aa            linear   BCT 02-MAR-2025
DEFINITION  trehalose-6-phosphate synthase [Brevibacterium luteolum].
ACCESSION   WP_257995103
VERSION     WP_257995103.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium luteolum
  ORGANISM  Brevibacterium luteolum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
REFERENCE   1  (residues 1 to 807)
  AUTHORS   Campbell,J.A., Davies,G.J., Bulone,V. and Henrissat,B.
  TITLE     A classification of nucleotide-diphospho-sugar glycosyltransferases
            based on amino acid sequence similarities
  JOURNAL   Biochem J 326 (Pt 3) (Pt 3), 929-939 (1997)
   PUBMED   9334165
  REMARK    Erratum:[Biochem J 1998 Feb 1;329(Pt 3):719]
REFERENCE   2  (residues 1 to 807)
  AUTHORS   Kaasen,I., McDougall,J. and Strom,A.R.
  TITLE     Analysis of the otsBA operon for osmoregulatory trehalose synthesis
            in Escherichia coli and homology of the OtsA and OtsB proteins to
            the yeast trehalose-6-phosphate synthase/phosphatase complex
  JOURNAL   Gene 145 (1), 9-15 (1994)
   PUBMED   8045430
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013173.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00982.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Brevibacterium luteolum"
                     /db_xref="taxon:199591"
     Protein         1..807
                     /product="trehalose-6-phosphate synthase"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_process="GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=88022
     Region          21..501
                     /region_name="OtsA"
                     /note="Trehalose-6-phosphate synthase, GT20 family
                     [Carbohydrate transport and metabolism]; COG0380"
                     /db_xref="CDD:440149"
     Region          538..807
                     /region_name="OtsB"
                     /note="Trehalose-6-phosphate phosphatase [Carbohydrate
                     transport and metabolism]; COG1877"
                     /db_xref="CDD:441481"
ORIGIN      
        1 mihtsaplea rstlvapped gadfivvanr lpvdrdtsge tpswrtspgg lvtgvapvmq
       61 thkgawigwa gvadeefdpf didgmhlvpv plsseevrry yegfsnatlw plyhdvivpp
      121 efhrtwwnsy rtvnrrfaea vartaskgat vwvhdyqlql vpyllrgmrp dvrigffnhi
      181 pfppweifaq lpwraqilrg llgadligfq rpadaqnfrr avriclglps sgnlvkipaa
      241 edpaselgdt ttitrtaeas afpisidteh laelardpri carakeirae lgnpetillg
      301 vdrmdytkgi rhrlkaygel fndgvldpgt vtlvqiatps reridqyqqi rtdvelavgr
      361 ingeysgmgh pvihyfhhsy prdemtalyi aadvmlvtal rdgmnlvake yvacqtdddg
      421 vlvlsefaga aeqltqavmv nphdisglks riaaavtmdp gekrarmram reslaeedvr
      481 awsdafltrl qqtdrasqae aaahmrtdqh ptdadaqpds apgysdpddi ditalaaadr
      541 llvgldfdgv iaplvdnpmd aaplpasaaa aealaaepnt vvgyisgrnl svlkqlsnap
      601 egaifigshg vesdfsaigg edigaadgrr sggnpaagty asgpsndeqa lldeldaaft
      661 dirtrtpeeg hgllrierkp lgrtfhtrgc senrtafyat elealakrlg qlrfltghem
      721 fefalrhqtk gnglermirq tgataalyig ddrtdedafk klrtypedfp rlsikvgpag
      781 taaevrlqsp ddvavflgrl aaaragr
//
LOCUS       WP_257995407             225 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Akkermansia muciniphila].
ACCESSION   WP_257995407
VERSION     WP_257995407.1
KEYWORDS    RefSeq.
SOURCE      Akkermansia muciniphila
  ORGANISM  Akkermansia muciniphila
            Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
            Verrucomicrobiales; Akkermansiaceae; Akkermansia.
REFERENCE   1  (residues 1 to 225)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 225)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Akkermansia muciniphila"
                     /db_xref="taxon:239935"
     Protein         1..225
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=24610
     Region          7..200
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(33,72,102,191,194)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(33,191,194)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(33,72,102)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
ORIGIN      
        1 mnpravydwk krheavmern rtvkpeyvvf gdsithrwgg epsgdnralg tgktawdslf
       61 sshavtnmgf gsdyvdnayy rlqlgeldgi sprviivllg tnnlggrkda prvcadnlka
      121 fvslarrkcp sskilllgil preekklapl iretnkmisg ladgnsvffa npgeeflged
      181 gvspkpglle dglhpsargy dilgkslsvl lkkmddkygk lpapr
//
LOCUS       WP_257995424             945 aa            linear   BCT 02-MAR-2025
DEFINITION  SpaA isopeptide-forming pilin-related protein [Corynebacterium
            aurimucosum].
ACCESSION   WP_257995424
VERSION     WP_257995424.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium aurimucosum
  ORGANISM  Corynebacterium aurimucosum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (residues 1 to 945)
  AUTHORS   Kang,H.J., Paterson,N.G., Gaspar,A.H., Ton-That,H. and Baker,E.N.
  TITLE     The Corynebacterium diphtheriae shaft pilin SpaA is built of tandem
            Ig-like modules with stabilizing isopeptide and disulfide bonds
  JOURNAL   Proc Natl Acad Sci U S A 106 (40), 16967-16971 (2009)
   PUBMED   19805181
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2009 Oct 27;106(43):18427]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037639.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17802.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Corynebacterium aurimucosum"
                     /db_xref="taxon:169292"
     Protein         1..945
                     /product="SpaA isopeptide-forming pilin-related protein"
                     /calculated_mol_wt=101432
     Region          131..274
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cd00198"
                     /db_xref="CDD:238119"
     Site            order(138,224,248)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     Region          <708..942
                     /region_name="iso_D2_wall_anc"
                     /note="SpaH/EbpB family LPXTG-anchored major pilin;
                     NF033902"
                     /db_xref="CDD:468234"
ORIGIN      
        1 mlaafiavma livgvsapaa laqevaetds akatdseten repetstttn etsttesssp
       61 ssselsepgs aapdesseal pdapalelgd eleplelran slglrtdrti dgdwkdlera
      121 dnpklpqvcg lnvalvfdls nsignnglsa tkqagrdvin alagtpttlg lfnfgtdapv
      181 antrdypkln lsdanqvrta rgvvdrythg ganpndaftd wggtnwegal knvnesgvdy
      241 dvvyfvtdga pttndsqlpk ninnvnwdgf tgdagrithn idvtaaikqa nilkkkgtrl
      301 ealavgnfdw rtpvlrddvg faggvrwngs yvrsdyrdit prtflavndg ssggpdlrya
      361 yesgvannll gyykissnsn pyyfrledei rqtplstgyw rnvtvadgag nvfevrvpae
      421 glsrqythkf dtaydimgsi vgpnndgltr vsnygelask lkeaatance gtltvkkqiv
      481 dsdgkildke akdwefeafd lkgeldvsla dgsqglkatt gengrvsysf dtdvphkngt
      541 isvretlkdg yrlykqdgkn atceavditd pdavakpvnv tdvkengfnv gigtglavfc
      601 tvqnyqqnsf hvsktphadq dkgqngdqpq apvkdgqvta yydisvtnne drevkleepv
      661 vdrvsfpegm tvtevkffyn gvelrndqvt rkesgefeis pslfgsfkag etkkvevhvt
      721 akvsedtqsa iedgtyerce apnppspdrp tsmfnavsia gevqgddpik dnqacvdpvl
      781 etvdisihkv dandnavsle gaefillpgs gaaatdlglp egglklepvs ddssklvlpk
      841 saklkpgkyk lvetkapvkd dgtrysllpr pleftasvkn gktvisledt pfavvdekdl
      901 siikvsnvta gnlprtggmg vgvfavigll lsgvgflwar rrlqs
//
LOCUS       WP_257995448             157 aa            linear   BCT 02-MAR-2025
DEFINITION  lanthionine synthetase LanC family protein [Streptococcus
            intermedius].
ACCESSION   WP_257995448
VERSION     WP_257995448.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus intermedius
  ORGANISM  Streptococcus intermedius
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus; Streptococcus anginosus group.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Xie,L., Chatterjee,C., Balsara,R., Okeley,N.M. and van der
            Donk,W.A.
  TITLE     Heterologous expression and purification of SpaB involved in
            subtilin biosynthesis
  JOURNAL   Biochem Biophys Res Commun 295 (4), 952-957 (2002)
   PUBMED   12127987
REFERENCE   2  (residues 1 to 157)
  AUTHORS   Mayer,H., Bauer,H., Breuss,J., Ziegler,S. and Prohaska,R.
  TITLE     Characterization of rat LANCL1, a novel member of the lanthionine
            synthetase C-like protein family, highly expressed in testis and
            brain
  JOURNAL   Gene 269 (1-2), 73-80 (2001)
   PUBMED   11376939
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05147.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Streptococcus intermedius"
                     /db_xref="taxon:1338"
     Protein         1..157
                     /product="lanthionine synthetase LanC family protein"
                     /GO_process="GO:0031179 - peptide modification [Evidence
                     IEA]"
                     /calculated_mol_wt=17785
     Region          <22..>154
                     /region_name="LanC_like"
                     /note="Cyclases involved in the biosynthesis of
                     lantibiotics, and similar proteins; cl04955"
                     /db_xref="CDD:471159"
ORIGIN      
        1 mfertenlii egndyielkm livdflsnli tkdemlssfy iksenlmsda erkmyplgcl
       61 nmglahglag vgsvlayays kgyktqssll alkniislye kfeikkdkql iwkdgiiide
      121 lrdkkilyep nfirdawcyg spgisllyly tglagtk
//
LOCUS       WP_257995480             108 aa            linear   BCT 02-MAR-2025
DEFINITION  Imm59 family immunity protein [Streptococcus intermedius].
ACCESSION   WP_257995480
VERSION     WP_257995480.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus intermedius
  ORGANISM  Streptococcus intermedius
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus; Streptococcus anginosus group.
REFERENCE   1  (residues 1 to 108)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026935.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15597.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Streptococcus intermedius"
                     /db_xref="taxon:1338"
     Protein         1..108
                     /product="Imm59 family immunity protein"
                     /calculated_mol_wt=13150
     Region          4..104
                     /region_name="Imm59"
                     /note="Immunity protein 59; pfam15597"
                     /db_xref="CDD:434803"
ORIGIN      
        1 midienmkci veqeikkrhf eslhyvlfde nknlpwafhl fyrdgkfmin grddrsyiig
       61 ktwefanfee akfffikkmt dfirlnrlei ktghepyyss plwdktdn
//
LOCUS       WP_257995510             547 aa            linear   BCT 02-MAR-2025
DEFINITION  family 16 glycosylhydrolase [Streptococcus intermedius].
ACCESSION   WP_257995510
VERSION     WP_257995510.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus intermedius
  ORGANISM  Streptococcus intermedius
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus; Streptococcus anginosus group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012925.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00722.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Streptococcus intermedius"
                     /db_xref="taxon:1338"
     Protein         1..547
                     /product="family 16 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=61381
     Region          13..148
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; pfam02018"
                     /db_xref="CDD:396553"
     Region          166..431
                     /region_name="BglS"
                     /note="Beta-glucanase, GH16 family [Carbohydrate transport
                     and metabolism]; COG2273"
                     /db_xref="CDD:441874"
ORIGIN      
        1 mlfashkvfa dtnlvknwdf eqgeagwtsr nkgeisskvs ygngkysgvv pataitnnka
       61 sgyigqvidv kpnttytvsa yaktdtegai gyftarwfdn ntqgelvkns sgaavdqnvn
      121 ttrwkkytft fhsgnhrkvl lqlvkwsdde rtkksniyid nvemkaqsnq qsykeiwrdd
      181 fdgteldktn wgyelgsirg ieqqhyvrsk envflrdgnl ilratnrape dqyanprdks
      241 rkviynsgsv rthgkkefly grlevraklp kgqgvfpafw tlgsdftldg kihsaqghgw
      301 pstgeidime lvgeqnplsr gnrtvyqtlh ygqrekdngk fagngtaysl pngtfndgyh
      361 tfaidwykdh idwlvdnkvv rsvrysddet arkilnkpqf aqlnlamgga wpgpvgqnla
      421 gtefaidyvs ysrnaeqekq aqeyyanapk lngvrnmtis kgqipdllkg itatpgyqvd
      481 ysidneqsfq dkggntsvdl lvkgqaeknk iaqlkpgvyn ihysayssnm tyeskvarkt
      541 vtltite
//
LOCUS       WP_257995568             550 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease [Corynebacterium aurimucosum].
ACCESSION   WP_257995568
VERSION     WP_257995568.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium aurimucosum
  ORGANISM  Corynebacterium aurimucosum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (residues 1 to 550)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024110.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12698.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Corynebacterium aurimucosum"
                     /db_xref="taxon:169292"
     Protein         1..550
                     /product="ABC transporter permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=56709
     Region          <3..167
                     /region_name="Mtu_fam_mce"
                     /note="virulence factor Mce family protein; TIGR00996"
                     /db_xref="CDD:273384"
     Region          226..253
                     /region_name="xxxLxxG_by_4"
                     /note="X-X-X-Leu-X-X-Gly heptad repeats; TIGR03057"
                     /db_xref="CDD:274412"
     Region          247..274
                     /region_name="xxxLxxG_by_4"
                     /note="X-X-X-Leu-X-X-Gly heptad repeats; TIGR03057"
                     /db_xref="CDD:274412"
     Region          331..531
                     /region_name="ABC2_membrane"
                     /note="ABC-2 type transporter; cl21474"
                     /db_xref="CDD:473876"
ORIGIN      
        1 missslipqv qtsvenaisk kyadqviegl nklsdglgta aegagrldeg agkllegggr
       61 avegiaklda gagdlnngtg qlldgtnrln dgvgrlsdga aqlddgaaql adgsdkllag
      121 tgrladgagq idggvnqltg mlipvlkqaq avapallqlv dvlrglgmhq qaeqlyslvs
      181 kldpaasgnm vaqleklsag tgqlyynlad pnseylggmm alndgahrls dgsqqlragv
      241 gelsdgaaql kdgasrlheg tgtlkdgtsq laaggtelkd gmdqlkagsn elatkladga
      301 akapsitqpd tsaqnmavpi nftssnlhpv qtvvdpvdpt qknitggvsm lfvlvfgflv
      361 mllvamtlpy ylgrrgesat spvrgilaaf gvvaglnflv lafmafmssm mgwspaswpm
      421 mllviaaiaa vgaatyqffl vtfgrkigai favgafalgi mvfggvwpva aiprplsmlh
      481 pfhpmsyakn aftratdgih dgtfwagiav lfivtalalv ascvvfrarh hgtarivdeh
      541 lfrapavvda
//
LOCUS       WP_257995628             292 aa            linear   BCT 02-MAR-2025
DEFINITION  T6SS effector amidase Tae4 family protein [Akkermansia
            muciniphila].
ACCESSION   WP_257995628
VERSION     WP_257995628.1
KEYWORDS    RefSeq.
SOURCE      Akkermansia muciniphila
  ORGANISM  Akkermansia muciniphila
            Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
            Verrucomicrobiales; Akkermansiaceae; Akkermansia.
REFERENCE   1  (residues 1 to 292)
  AUTHORS   Zhang,H., Zhang,H., Gao,Z.Q., Wang,W.J., Liu,G.F., Xu,J.H., Su,X.D.
            and Dong,Y.H.
  TITLE     Structure of the type VI effector-immunity complex (Tae4-Tai4)
            provides novel insights into the inhibition mechanism of the
            effector by its immunity protein
  JOURNAL   J Biol Chem 288 (8), 5928-5939 (2013)
   PUBMED   23288853
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025478.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14113.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Akkermansia muciniphila"
                     /db_xref="taxon:239935"
     Protein         1..292
                     /product="T6SS effector amidase Tae4 family protein"
                     /calculated_mol_wt=32611
     Region          <21..86
                     /region_name="PA14"
                     /note="PA14 domain; cl08459"
                     /db_xref="CDD:471833"
     Region          174..>239
                     /region_name="Tae4"
                     /note="Type VI secretion system (T6SS), amidase effector
                     protein 4; pfam14113"
                     /db_xref="CDD:433727"
ORIGIN      
        1 mkkkdapkiv whkteetgvh dwegyiripf dkeyaftiqm ddngyleidn qkvvelkdgn
       61 ssrkaegkke lkqgyhyvkl hhenlkvpdt iapypnaeef vpqmdgadle lweidapvnl
      121 wktedaqkll kcynmvdyvt mpnpgqvwsy iggwlyqahl keiednvpeq lrnyynscal
      181 rmsialssfg kdlkneagae ligdkanaga lggkthviir ardmaayvqk llgdpdyadg
      241 qdtgycspqp gdiivfagkg hagmcpgdni sigsfltgpi wlinratlkd ae
//
LOCUS       WP_257995378             193 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: putative peptidoglycan-binding domain-containing
            protein [Akkermansia].
ACCESSION   WP_257995378
VERSION     WP_257995378.1
KEYWORDS    RefSeq.
SOURCE      Akkermansia
  ORGANISM  Akkermansia
            Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
            Verrucomicrobiales; Akkermansiaceae.
REFERENCE   1  (residues 1 to 193)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     COG3926 and COG5526: a tale of two new lysozyme-like protein
            families
  JOURNAL   Protein Sci 14 (10), 2574-2581 (2005)
   PUBMED   16155206
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020931.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09374.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Akkermansia"
                     /db_xref="taxon:239934"
     Protein         1..193
                     /product="putative peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=21572
     Region          <102..184
                     /region_name="ZliS"
                     /note="Lysozyme family protein [General function
                     prediction only]; COG3926"
                     /db_xref="CDD:443130"
ORIGIN      
        1 mdtterkmaa ailrfedsrv tgpyslrvsr lpaadkggkw eicgicdgie pdvfnrlkal
       61 ldagrreeaw egclqyvldn taavrswlgs dafpatefml rdhyfnsgsr ntgkilqral
      121 nihgaglvvd gipgkqtrqm lktvlaqtge seflstlner rksfyrsckq fpvfgkgwln
      181 rsneayrfaq slv
//
LOCUS       WP_257995690             193 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: putative peptidoglycan-binding domain-containing
            protein [Akkermansia].
ACCESSION   WP_257995690
VERSION     WP_257995690.1
KEYWORDS    RefSeq.
SOURCE      Akkermansia
  ORGANISM  Akkermansia
            Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
            Verrucomicrobiales; Akkermansiaceae.
REFERENCE   1  (residues 1 to 193)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     COG3926 and COG5526: a tale of two new lysozyme-like protein
            families
  JOURNAL   Protein Sci 14 (10), 2574-2581 (2005)
   PUBMED   16155206
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020931.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09374.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Akkermansia"
                     /db_xref="taxon:239934"
     Protein         1..193
                     /product="putative peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=21280
     Region          <93..181
                     /region_name="ZliS"
                     /note="Lysozyme family protein [General function
                     prediction only]; COG3926"
                     /db_xref="CDD:443130"
ORIGIN      
        1 mnttekkmaa ailrfeddrv tgpaslrvsr lpaadkggkw eicgicdgie pavfnrlkal
       61 ldagkqeeaw egclqyildn taavrswigs dahpgieffl rdhyfnsgsk ntgkilqral
      121 ndhgagiavd gipgkqtrqt lqtvlaesge rklldslyer resfycscrq fstfgngwrn
      181 rcknayefaa ala
//
LOCUS       WP_257995757             737 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxy terminal-processing peptidase [Akkermansia muciniphila].
ACCESSION   WP_257995757
VERSION     WP_257995757.1
KEYWORDS    RefSeq.
SOURCE      Akkermansia muciniphila
  ORGANISM  Akkermansia muciniphila
            Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
            Verrucomicrobiales; Akkermansiaceae; Akkermansia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023246.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11818.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Akkermansia muciniphila"
                     /db_xref="taxon:239935"
     Protein         1..737
                     /product="carboxy terminal-processing peptidase"
                     /EC_number="3.4.21.102"
                     /calculated_mol_wt=82482
     Region          45..737
                     /region_name="PRK11186"
                     /note="carboxy terminal-processing peptidase"
                     /db_xref="CDD:236873"
ORIGIN      
        1 mhsfrwirlt afsalaaaai tscasaatdf nqvgkqmsll lqnfhfsrke fsdelstkfl
       61 etylrkvdpn kifftqqdvd alkrkygkel ddylmsgqmm daaqamhaly rqramqrisy
      121 ardllkkggf tfdkdksier srrktaawpk deaemqqvwk dmveeqllse ilrretvarl
      181 akeqnkpdpl anekpaeekl lmryeriqrn iqetdledva etllsavalt ydphtdymga
      241 rqvdrfkism gteltgigal lgseddgstk itgivvggpa dksgelklnd rivaidsdns
      301 gemvdilfmk ldkvvdmirg aentqmrlkv epadapgqak iitltrskvp lkdelakgei
      361 ieltgapegr nrigvlslps fyadmeggdr rcakdvkkil ermnkenvdg lvidlrsngg
      421 gsleevrlmt gfftgngpvv qikdtrgnvd iksahnrqkl fngpivvlin klsasaseil
      481 aaalqdygra vivgdestfg kgsvqqpvdi gqylpffaar dragllkvtt qkfyrvaggs
      541 tqlkgvesdi qlptataafe lgedildyam pydqitpctn ykkdssiaam lpvlkdasak
      601 rvekdrdlqi arediammkq rikdnklsln kkireqensa leerrksink erkirfaema
      661 kedttkykiy rltlddvnak elpladpekd neqfmhlaed ptaelddspe ypsgldpelr
      721 eginivqdml klessgk
//
LOCUS       WP_257995758             399 aa            linear   BCT 02-MAR-2025
DEFINITION  RICH domain-containing protein, partial [Streptococcus pneumoniae].
ACCESSION   WP_257995758
VERSION     WP_257995758.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016920.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05062.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         1..>399
                     /product="RICH domain-containing protein"
     Region          1..399
                     /region_name="PspC_subgroup_1"
                     /note="pneumococcal surface protein PspC, choline-binding
                     form; NF033838"
                     /db_xref="CDD:468201"
ORIGIN      
        1 mfaskserkv hysirkfsig vasvvvaslf lggvvhaegv rsgdtpkvts sgdeveshlk
       61 kilseiqtql drkrhaktva linklqdikr tysyklnvle ekpkaeltsk tkeeltaafe
      121 qfkkdtlste pekkvaetqk kvaeakkkae vqkeedhrny ptityktlel eiaefdvkvk
      181 eaelelvkke adesrnegti nqakakvese kaeatrlkki ktdrekaeee akrkaaeedk
      241 vkekpaeqpq papapkpekp apapkpenpa eqpkaekpad qqaeedyarr seeeynrltq
      301 qqppktekpa qpstpktgwk qengmwyfyn tdgsmatgwl qnngswyyln sngamatgwl
      361 qnngswyyln angsmatgwl qnngswyyln angsmatgw
//
LOCUS       WP_257995739             244 aa            linear   BCT 02-MAR-2025
DEFINITION  heparan-alpha-glucosaminide N-acetyltransferase domain-containing
            protein [Akkermansia muciniphila].
ACCESSION   WP_257995739
VERSION     WP_257995739.1
KEYWORDS    RefSeq.
SOURCE      Akkermansia muciniphila
  ORGANISM  Akkermansia muciniphila
            Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
            Verrucomicrobiales; Akkermansiaceae; Akkermansia.
REFERENCE   1  (residues 1 to 244)
  AUTHORS   Durand,S., Feldhammer,M., Bonneil,E., Thibault,P. and
            Pshezhetsky,A.V.
  TITLE     Analysis of the biogenesis of heparan sulfate
            acetyl-CoA:alpha-glucosaminide N-acetyltransferase provides
            insights into the mechanism underlying its complete deficiency in
            mucopolysaccharidosis IIIC
  JOURNAL   J Biol Chem 285 (41), 31233-31242 (2010)
   PUBMED   20650889
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019403.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07786.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Akkermansia muciniphila"
                     /db_xref="taxon:239935"
     Protein         1..244
                     /product="heparan-alpha-glucosaminide N-acetyltransferase
                     domain-containing protein"
                     /calculated_mol_wt=26539
     Region          2..>188
                     /region_name="COG4299"
                     /note="Predicted acyltransferase, DUF1624 domain [General
                     function prediction only]"
                     /db_xref="CDD:443440"
ORIGIN      
        1 mdalrgldml iilgldalvl llasrnpesa flqeaarqmt harweglhly dlvfpvfvfi
       61 sgvsmsfslg kytsgnassv pgllhlwkra lvlaflgllv ngtltwtesm ryasvlglig
      121 fscaiagtci llcrrtgava saagfilali tllqftcgnf tpdgsvnswv drhwlagrlh
      181 ggvfdpegpl lrrfrfrpvs grmagreife gkpalsrapl rsngrgrpsp flrrqdagrp
      241 lphh
//
LOCUS       WP_257995840             328 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Corynebacterium
            xerosis].
ACCESSION   WP_257995840
VERSION     WP_257995840.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium xerosis
  ORGANISM  Corynebacterium xerosis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (residues 1 to 328)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Corynebacterium xerosis"
                     /db_xref="taxon:1725"
     Protein         1..328
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=34422
     Region          18..326
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(23,25..26,28,47..49,95..97,137..139,164,168,
                     191..194)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187566"
     Site            order(115,139,164,168)
                     /site_type="active"
                     /db_xref="CDD:187566"
ORIGIN      
        1 mpadmrdttp ttafppsral vtggagfigs tlvdrlladg havtvvddls hgklanlega
       61 ratgadrfkf veadvlavdw dellervrpe vifhlaaqid vresvadpvh daelnivgti
      121 riadaarrng vrkivftssg gsiygtpdsf pvgedqevrp lspyaasksa aeqylnmfrr
      181 lhgldcshia panvygprqd phgeagvvai faqrllageg tqvfgdggnt rdyvfvgdvv
      241 dafvraagta gsgmrfnigt gvettdrqlh slvaeaagaa depghaparp gdvprsaldp
      301 slagevlgwa psvgiaegvr rtvdhfrg
//
LOCUS       WP_257995846             452 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Corynebacterium xerosis].
ACCESSION   WP_257995846
VERSION     WP_257995846.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium xerosis
  ORGANISM  Corynebacterium xerosis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (residues 1 to 452)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Corynebacterium xerosis"
                     /db_xref="taxon:1725"
     Protein         1..452
                     /product="AMP-binding protein"
                     /calculated_mol_wt=45869
     Region          32..446
                     /region_name="PRK07824"
                     /note="o-succinylbenzoate--CoA ligase"
                     /db_xref="CDD:236108"
ORIGIN      
        1 mnahdtvthr ldllpmwpgl raleavptla haldgkvsll pvpaddpara ellartqrag
       61 dpidadvaiv actsgstgtp kgamltaanl rasidathsr lggpgqwlla tppshiaglq
      121 vllrtlrage vpvamelsdg frpssladai gamsgrrryt sivplqlgri lgdagataal
      181 asldgvlvgg qatspellrr araagvtvlt sygssetsgg tvydgrpldg adisiadgdg
      241 dgdgtegcsg grgkdrsees prgatpgavt pggadpgriv vsgpmvsrgy rnvddpdlad
      301 gvfrtsdags ldhsvngrpv lrvlgrtddi iisgglkflp gpiedaltaf gdiaaaavvg
      361 vphpelghav vaavtlhdag spspgatppd psaadtgaie ehlrarlapv ldkhqvprav
      421 fvvkqlptlp sgkldrtgla atlaarwgmm se
//
LOCUS       WP_257995900              41 aa            linear   BCT 02-MAR-2025
DEFINITION  cation-transporting P-type ATPase [Corynebacterium xerosis].
ACCESSION   WP_257995900
VERSION     WP_257995900.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium xerosis
  ORGANISM  Corynebacterium xerosis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012893.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00690.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..41
                     /organism="Corynebacterium xerosis"
                     /db_xref="taxon:1725"
     Protein         1..41
                     /product="cation-transporting P-type ATPase"
                     /calculated_mol_wt=4430
     Region          <1..30
                     /region_name="Cation_ATPase_N"
                     /note="Cation transporter/ATPase, N-terminus; smart00831"
                     /db_xref="CDD:214842"
ORIGIN      
        1 mpeperagav rrflghfndp liyvligaga prrfadhgpc r
//
LOCUS       WP_257995929             706 aa            linear   BCT 02-MAR-2025
DEFINITION  catalase [Corynebacterium xerosis].
ACCESSION   WP_257995929
VERSION     WP_257995929.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium xerosis
  ORGANISM  Corynebacterium xerosis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012425.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00199.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Corynebacterium xerosis"
                     /db_xref="taxon:1725"
     Protein         1..706
                     /product="catalase"
                     /EC_number="1.11.1.6"
                     /GO_function="GO:0004096 - catalase activity [Evidence
                     IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=77344
     Region          17..706
                     /region_name="katE"
                     /note="hydroperoxidase II; Provisional; PRK11249"
                     /db_xref="CDD:236886"
ORIGIN      
        1 mrpgvpgpep vsyeeptdpr gplepkadqt spkpatptgc pvhadrtdfa qqgeylttpq
       61 gvrraetdhs lkagargpvl lqdhhfqekl qhfdreripe rvvhargaga hgvfrsngka
      121 akitragflk egaetpvfvr fstvagfrgs idtardtrgf avkfytdggn hdlvgnnipv
      181 ffiqdgikfp dvvhsvkpqm dreipqaqsa hdtfwdfvsl hteatfhtmf nmsdrgiprs
      241 yrmmegfgih tfrlindage tslvkfhwkp klgvhsqiwe eaqlsggadp dlhrrdlada
      301 ieagafpewd lgvqvfpdna eetfegidll dptklvpeei apveiigtmv lngnptnyfa
      361 eteqiafcps nmvpgiettn dpllqgrlfs ykdtqmhrlg gpnftqlpin rphvpvndmq
      421 rdgfaqhavp ggasayhpns vdggcpflad petaggyiev pqeiadaikt rekpasfhdh
      481 fsqprmfwks lsdverdhli daytfelskc fdetirrrvv aevlahidqe laesvatglg
      541 lpapepvkdl pepepspals qirgpfpldg rqvgiiadda tdakaldkli kgiddagmvp
      601 lviadhagrl gnkhdgatvq rttfntrsie fdaviaaadl dapeiavllg etfrhlkaia
      661 aigdgqklvk rhvdakapgi vladdagkal ksllklmpeh rvwdra
//
LOCUS       WP_257996102             227 aa            linear   BCT 02-MAR-2025
DEFINITION  type II secretion system F family protein [Corynebacterium
            xerosis].
ACCESSION   WP_257996102
VERSION     WP_257996102.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium xerosis
  ORGANISM  Corynebacterium xerosis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (residues 1 to 227)
  AUTHORS   Desvaux,M., Hebraud,M., Talon,R. and Henderson,I.R.
  TITLE     Secretion and subcellular localizations of bacterial proteins: a
            semantic awareness issue
  JOURNAL   Trends Microbiol 17 (4), 139-145 (2009)
   PUBMED   19299134
REFERENCE   2  (residues 1 to 227)
  AUTHORS   Desvaux,M., Parham,N.J., Scott-Tucker,A. and Henderson,I.R.
  TITLE     The general secretory pathway: a general misnomer?
  JOURNAL   Trends Microbiol 12 (7), 306-309 (2004)
   PUBMED   15223057
REFERENCE   3  (residues 1 to 227)
  AUTHORS   Peabody,C.R., Chung,Y.J., Yen,M.R., Vidal-Ingigliardi,D.,
            Pugsley,A.P. and Saier,M.H.
  TITLE     Type II protein secretion and its relationship to bacterial type IV
            pili and archaeal flagella
  JOURNAL   Microbiology (Reading) 149 (Pt 11), 3051-3072 (2003)
   PUBMED   14600218
REFERENCE   4  (residues 1 to 227)
  AUTHORS   Py,B., Loiseau,L. and Barras,F.
  TITLE     An inner membrane platform in the type II secretion machinery of
            Gram-negative bacteria
  JOURNAL   EMBO Rep 2 (3), 244-248 (2001)
   PUBMED   11266368
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012694.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00482.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Corynebacterium xerosis"
                     /db_xref="taxon:1725"
     Protein         1..227
                     /product="type II secretion system F family protein"
                     /calculated_mol_wt=22158
ORIGIN      
        1 mtwallllav aalipvrars mdrwpgidge reamaggged egppaapadg gtrgavldrl
       61 lpalrgvagp rtrapnpmel ldaaaaldll aacmnsgmpp gdaaaatasa aparlarpls
      121 dvagrlslga sapwsalaav peladlvala rrsgdsgaam aagvaelavv rraaagdaae
      181 ataeragvli agplalcflp afvvlglipt iagladtmlg sltagpa
//
LOCUS       WP_257996124              99 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Corynebacterium xerosis].
ACCESSION   WP_257996124
VERSION     WP_257996124.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium xerosis
  ORGANISM  Corynebacterium xerosis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (residues 1 to 99)
  AUTHORS   Davies,D.R., Mahnke Braam,L., Reznikoff,W.S. and Rayment,I.
  TITLE     The three-dimensional structure of a Tn5 transposase-related
            protein determined to 2.9-A resolution
  JOURNAL   J Biol Chem 274 (17), 11904-11913 (1999)
   PUBMED   10207011
REFERENCE   2  (residues 1 to 99)
  AUTHORS   DasSarma,S.
  TITLE     Identification and analysis of the gas vesicle gene cluster on an
            unstable plasmid of Halobacterium halobium
  JOURNAL   Experientia 49 (6-7), 482-486 (1993)
   PUBMED   8335077
REFERENCE   3  (residues 1 to 99)
  AUTHORS   Ferrante,A.A. and Lessie,T.G.
  TITLE     Nucleotide sequence of IS402 from Pseudomonas cepacia
  JOURNAL   Gene 102 (1), 143-144 (1991)
   PUBMED   1650732
REFERENCE   4  (residues 1 to 99)
  AUTHORS   De Meirsman,C., Van Soom,C., Verreth,C., Van Gool,A. and
            Vanderleyden,J.
  TITLE     Nucleotide sequence analysis of IS427 and its target sites in
            Agrobacterium tumefaciens T37
  JOURNAL   Plasmid 24 (3), 227-234 (1990)
   PUBMED   1963949
REFERENCE   5  (residues 1 to 99)
  AUTHORS   Sato,S., Nakada,Y. and Shiratsuchi,A.
  TITLE     IS421, a new insertion sequence in Escherichia coli
  JOURNAL   FEBS Lett 249 (1), 21-26 (1989)
   PUBMED   2542093
REFERENCE   6  (residues 1 to 99)
  AUTHORS   Kroger,M. and Hobom,G.
  TITLE     Structural analysis of insertion sequence IS5
  JOURNAL   Nature 297 (5862), 159-162 (1982)
   PUBMED   6281654
REFERENCE   7  (residues 1 to 99)
  AUTHORS   Klaer,R., Kuhn,S., Tillmann,E., Fritz,H.J. and Starlinger,P.
  TITLE     The sequence of IS4
  JOURNAL   Mol Gen Genet 181 (2), 169-175 (1981)
   PUBMED   6268937
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01609.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Corynebacterium xerosis"
                     /db_xref="taxon:1725"
     Protein         <1..99
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <6..95
                     /region_name="Srso17"
                     /note="SRSO17 transposase [Mobilome: prophages,
                     transposons]; COG5659"
                     /db_xref="CDD:444378"
ORIGIN      
        1 qpprtgtrrr gtcepltnpg rfrlstlpet tpieqlvrlg kirwriehdy relkhglgld
       61 hfegrhwlgw hhhttpvtaa hlfitmkrla agpkalpaa
//
LOCUS       WP_257996153             710 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5776 domain-containing protein [Gemella sanguinis].
ACCESSION   WP_257996153
VERSION     WP_257996153.1
KEYWORDS    RefSeq.
SOURCE      Gemella sanguinis
  ORGANISM  Gemella sanguinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Gemellaceae;
            Gemella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039855.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19087.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Gemella sanguinis"
                     /db_xref="taxon:84135"
     Protein         1..710
                     /product="DUF5776 domain-containing protein"
                     /calculated_mol_wt=83191
     Region          <116..>386
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          536..596
                     /region_name="DUF5776"
                     /note="Domain of unknown function (DUF5776); pfam19087"
                     /db_xref="CDD:465973"
ORIGIN      
        1 mtteenekfn eeqssnsdle kenkssffgr lktqvsnlkt kveklafeef edddanhede
       61 eelnneikkt tdkkevvesk hitnnneini skqsieykqi ddnkqvtnhe pekieedked
      121 dvqiedeeli qkekeakqra iqleeerkqf eltqqkiaek qkrraaeree eerlererie
      181 rekelerqri ekekaekreq erlereriar ekelerqrie kekaekreqe rlereriahe
      241 kkleqerler eqaekrrref eerekaqkla derkkielle kqnqkrehen nllhlknsll
      301 itedkiedqk mllhrlkrrn eeqekiqpvk ekldsliaek qqlnkdisae kkqiekiqkq
      361 ldleqklagf rkeinsikke vvnedetifk vkdsnnklqn ifvaaftsik atvlkkifkk
      421 dvenydnikk tgsnikvkia tslilatlls ifflitlkfv ssaqehyvgf ddlqttqvds
      481 teemkkqkea eekakileaq ekanaarids eaqdeeitak lagtfvsysf dvkrevtvnk
      541 kihsfksanw sdtgdvieag tklkvdklvs pagymmyris sgehsgkyit anekfvsidk
      601 kedqlsnpis rpvaikllas qniysdeels kvrvtmsnga vlningygis knnrliyyis
      661 dgsyvpvnpv ritevnresa nskdinkenn nssnnqknst tqnttqkknn
//
LOCUS       WP_257996155            1053 aa            linear   BCT 02-MAR-2025
DEFINITION  glucosaminidase domain-containing protein [Aerococcus loyolae].
ACCESSION   WP_257996155
VERSION     WP_257996155.1
KEYWORDS    RefSeq.
SOURCE      Aerococcus loyolae
  ORGANISM  Aerococcus loyolae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Aerococcaceae; Aerococcus.
REFERENCE   1  (residues 1 to 1053)
  AUTHORS   Nambu,T., Minamino,T., Macnab,R.M. and Kutsukake,K.
  TITLE     Peptidoglycan-hydrolyzing activity of the FlgJ protein, essential
            for flagellar rod formation in Salmonella typhimurium
  JOURNAL   J Bacteriol 181 (5), 1555-1561 (1999)
   PUBMED   10049388
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013954.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01832.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Aerococcus loyolae"
                     /db_xref="taxon:2976809"
     Protein         1..1053
                     /product="glucosaminidase domain-containing protein"
                     /GO_function="GO:0004040 - amidase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=118575
     Region          <540..1049
                     /region_name="PRK08581"
                     /note="amidase domain-containing protein"
                     /db_xref="CDD:236304"
     Region          <723..890
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
ORIGIN      
        1 maenrdskfq qgfqsktiks snfqfnerns lnlstrsgyr vsvhtqrkqs wptttlrsdf
       61 iqnsiipavt kgfqsnpssk slnlqeenlq nvksfaktty rigkygyqnh ltsrsgksls
      121 diqnrintdl nntgktsyrl nryntsnrst tqklkssnrl hvnrfdkrsn iqnfssvqht
      181 iqsdlrqtgk yiyqlnvygt drvtnsivpr pilgylpgkp srtrvvqsan alrsrnlkgk
      241 iyyttrnsev skkkktldyi kkfakeslke gtsandgtlt gdsidkiknl sltagnkavn
      301 lvlqkkylds rkanfaknsr ytlersnnkl qtsknyqrsk egifskklsr kksiqksyqi
      361 tnfrekikis nlketireip lrlakgfkkf vanatsssgl mkfliplvli ftligafslf
      421 fistssmsey syffdskdgt eiekrftske ldylkmitde adkvkddpna eiiydpvghd
      481 pheilalfnv lllprylask dnnfkmpwee ldkiidqlie trykfnkevw ndtykdekgn
      541 tvsvkhtrlt skttsvsniv aiqgfdvpks qaefierisg dasemankng iyasimiaqa
      601 ilesdngksg lsrepyfnlf gikgayeges vnmgtledtg ggnmvgindn frdypsykes
      661 mqdyadliar qypgavkant ssyrdaayal qgtyatdtsy asklisiiea nnltrfdtyd
      721 sgiaketkek kkdledhqqk enkkkkemkg difaltdyer dlyqkmfkak gimgtynfpv
      781 kdydwqknik esygyywdqe nkekvasdgt likipagktv nsivlgkvre vdgnrlvies
      841 kdftvveydn ldaisvqvgq tvnigdavak tsgqglyirm fdgkknpidp kivmfyegki
      901 npnnnavnna tgtaildtyd sipggsfppp dpnfvagnnt avagqctwyv inrltqlgvh
      961 vpqpmgngge wwiygqkygl pvsrtakagt aisfppgvaw sdatyghvaf vekvgdngei
     1021 yisemnvkgp fvisyrtlpa dvaaqcyyid fgl
//
LOCUS       WP_257995877            3093 aa            linear   BCT 02-MAR-2025
DEFINITION  sialoglycan-binding domain-containing protein [Lactobacillus
            iners].
ACCESSION   WP_257995877
VERSION     WP_257995877.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus iners
  ORGANISM  Lactobacillus iners
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (residues 1 to 3093)
  AUTHORS   Bensing,B.A., Loukachevitch,L.V., McCulloch,K.M., Yu,H., Vann,K.R.,
            Wawrzak,Z., Anderson,S., Chen,X., Sullam,P.M. and Iverson,T.M.
  TITLE     Structural Basis for Sialoglycan Binding by the Streptococcus
            sanguinis SrpA Adhesin
  JOURNAL   J Biol Chem 291 (14), 7230-7240 (2016)
   PUBMED   26833566
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042446.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20164.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3093
                     /organism="Lactobacillus iners"
                     /db_xref="taxon:147802"
     Protein         1..3093
                     /product="sialoglycan-binding domain-containing protein"
                     /calculated_mol_wt=342199
     Region          21..42
                     /region_name="YSIRK_signal"
                     /note="YSIRK type signal peptide; cl22626"
                     /db_xref="CDD:451412"
     Region          1187..1296
                     /region_name="GspA_SrpA_N"
                     /note="GspA/SrpA SigLec-like domain; pfam20164"
                     /db_xref="CDD:466315"
     Region          1409..1517
                     /region_name="GspA_SrpA_N"
                     /note="GspA/SrpA SigLec-like domain; pfam20164"
                     /db_xref="CDD:466315"
     Region          1633..1739
                     /region_name="GspA_SrpA_N"
                     /note="GspA/SrpA SigLec-like domain; pfam20164"
                     /db_xref="CDD:466315"
     Region          1847..1951
                     /region_name="GspA_SrpA_N"
                     /note="GspA/SrpA SigLec-like domain; pfam20164"
                     /db_xref="CDD:466315"
     Region          1953..2033
                     /region_name="Rib"
                     /note="Rib domain; pfam08428"
                     /db_xref="CDD:462474"
     Region          2066..2178
                     /region_name="GspA_SrpA_N"
                     /note="GspA/SrpA SigLec-like domain; pfam20164"
                     /db_xref="CDD:466315"
     Region          2282..2377
                     /region_name="GspA_SrpA_N"
                     /note="GspA/SrpA SigLec-like domain; pfam20164"
                     /db_xref="CDD:466315"
     Region          2491..2598
                     /region_name="GspA_SrpA_N"
                     /note="GspA/SrpA SigLec-like domain; pfam20164"
                     /db_xref="CDD:466315"
ORIGIN      
        1 mklsknniqs klqkeahqip hfsirkltig aasvllstsl ylnwnnlnal aaensstkhg
       61 tydvnkkqen ppaaneslkt tnkmvdkklv nqkvnqtdae lkahiataen lnsdkitpkt
      121 nqqldlaiat aktaiqsyse dakkdtahrl ktvvlqakke aaektkkesv ksvsvdnlka
      181 lsdqlfdktm hldqtkadkg dvqkiidfgi eldgflknkn lkaeqlnnye tnakrmlalv
      241 dklpkiqina hgksmpqsrs yadrdgedrd fdlknlslhk plsakefnsd qfklqqekns
      301 aiaflqyals wnnnpqntvv detaggnkvk deeikenail ginvannreq irqwldyvfw
      361 hkrgmfivpq spdgnttgnd vfalykpgtf lygthnnake iptvkeihnt vyvknslikd
      421 qtgklvgyhw tvefnhqhad rksghyyftt pkgqsivssn dskngvkfad aaivstdasg
      481 hsktltgrgy tvdniwqnat qndflpadrv sgtaqgpety ygkqswktyt rngvnlwwgg
      541 gsfsrwnyig sahtlkdiiy khywqgsnyp qsgctklnkd ewgdeaqftn srdgikmgpf
      601 idnlykykyd fnkgessdyq ridyaqliqe ntdrvymfes kqddtntyki tfdtriddpk
      661 stnvhnpyya agyhsyenkt tvnymqwggl rfkpelsiti ngkknnilvd pqthndyvev
      721 hegektkisl nskndkqgla mwstdyksts alswqlgkad enlfnadyke tpvdadnnaa
      781 npyvhqnarm elsgvviakp gsemniawag sgmpnftadd itniygnktq mddglnaflp
      841 nreirsvnvr vipaaayaqk tkiairfkgq qivlseqekq aikktiyaan kdhydiknge
      901 ngitvdnsen vsftiqfnaa khkgdranmq yrnltlkpad tlsyttidik pvdgsasfsl
      961 nskngvidpt ltvynhepyq vkvnatdtts kmndfltngg tnvtglstdh qeyqknhrgm
     1021 hvddktpyvl tmngqglskd gktykikfes wdgndtktvs qevkvvvadq agryqnkvkg
     1081 rtwtvevndk tadhlkpenf vddstkamlg kapsgvagkt gvtytfkngv pahdhvtkgn
     1141 tpkdvtvvak ftdnstleik gklivndtqn pivefdttdh kvanegnnty qlnvysnekf
     1201 dvaikahdns nivqdlrakq gntlpqwiss deeqvqtkyk adtkgkrdsk gtsnnpyiih
     1261 ltgtvpnnmv nqtykvsata wddvdhtgta nleihilpqc dkyknllhgk tqtievkeai
     1321 pdiksfvtak gvklpdsvky tykgtgfdnt nikeqnavik ltfadnsyid vnaklnvqdt
     1381 hlatvqfast dahvkvsdnk yiqstkpsdt kqskvtitay vneefgvnvn andnsghild
     1441 vllskdngsl awmtsndrdy qqhnrnkavs eshpyqiqlt gtpstkgtst aviktwdgan
     1501 hegdikftin vldqaaqfdg dklngatktv evndnvvlsp tdfvdaktqa llkkaandvk
     1561 ytwttsdgkq panntvstkt ngkyqpsdvk iiakfsdgst ktitghlivq dtkaptvkfe
     1621 etpnvqgnki aigtetsnnq ksvtittyrn ekfsfdvkan dnsklvsdvk ltgttlegts
     1681 tdhdskkdhg tdpytltifg sftpttktgq ytrtiqatdk agnssntsfk fyvkeqaaqf
     1741 dgqtltgqtq tvtlhtkinq neveryvsda tksllkkang nvtysfkdmk elstdavsad
     1801 gkqvhviatf sdkstkeiig tlivndknap tvnfvkgtns gpvqidnqsk titvyrnekf
     1861 ninanvkdds kvvkdaklis kdaathteft ittdhdsnhn hghdpyvlni sgsfgtqakl
     1921 gsysrtihav dgnnnsgdtn fkfvvkeqaa qfdgdqlnga tktvevnsgy tpkaedfidk
     1981 atkqkldaan gtenyafakq ptidkvktet vpitvtfsdg shkvingtlk vqdttvpslk
     2041 liktnsnkkn rvgeitctps dskhknstat vvvyrneqfs iqalatdnsn iindarfhgs
     2101 aaditdnhdv yqaqyrgkkg kvndpyvvti egsfskdlkf dpnthtktid gayvrawdgv
     2161 dntndlkikf ivkdqsaqfd ndklngitki veinsanipq aqdfidpatl kklssakdgi
     2221 tcsfangkep kidtvktnek vdvvvtfsyk stktirghlt vkdttapvit vaksekgkcv
     2281 vngdqitvyn nepfnlnvsa vdnsnhvsni tiegthegvs lasdhkgegs kakpytavis
     2341 gtfndkgtht itlnatdasn nkgtkkltvv vkgqdaqfdn qtltgitktv evnddsvsln
     2401 pedfvsqdtk nllgkatkgv kwtfvdnkel dkskvtsant gkevhikaef adktsktilg
     2461 hlivqdtkap tlelvssdpk skdvvvtkgs nnsynitvyc grefkllaka tdnshvvtdv
     2521 niaggdikgf sndhdtyikn laknpkgtsk dpyvltmtgt fandfstgly ertvtakdas
     2581 ghsttitmki tlksqnerfk defhgykvlv peqldwqqif kaenqpvppk dfvaipadap
     2641 dnlsykfecd dsgnpciyvd fadksslkls letitadaqn knrvaetiqr niiikkdgqs
     2701 ttsvqkaefi ryiilksegi skissialdk dlrsasisde ygqwltksks ndnvvtysdn
     2761 aelskydakn ivgyqkveta ndtlevkpns ndsinkylie ktdendfspa kkipdiviey
     2821 krladvitnd ghhekpagyv tvtfsagdhg klsetghksy yvnpktetdl nseapmveae
     2881 igykftqwdk elkgkftsdt titaqytkyd dvipvgpnvq kpagyvtvtf sagdhgklse
     2941 tghksyyvnp ktetdlnsea pmveaeigyk ftqwdkelkg kftsdttita qytkyddvip
     3001 vgpnvqkpvd nisnnntign dlmnntsdln nevtesstan kqkdlsatek ktnskitkrl
     3061 pqtgekensv lglliiglsg llgivdrkkr kdk
//
LOCUS       WP_257996230             387 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6057 family protein [Hoylesella timonensis].
ACCESSION   WP_257996230
VERSION     WP_257996230.1
KEYWORDS    RefSeq.
SOURCE      Hoylesella timonensis
  ORGANISM  Hoylesella timonensis
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Prevotellaceae; Hoylesella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039640.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19529.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Hoylesella timonensis"
                     /db_xref="taxon:386414"
     Protein         1..387
                     /product="DUF6057 family protein"
                     /calculated_mol_wt=45074
     Region          16..383
                     /region_name="DUF6057"
                     /note="Family of unknown function (DUF6057); pfam19529"
                     /db_xref="CDD:437361"
ORIGIN      
        1 matyhipnqk ksllpcilcs vvfccftfiy lfsyqcdvla vtqhvlsngq tyydktigav
       61 litvilyllh isifwffrls rigyaltffp slllltaltd idtekiyhhs algawwwvip
      121 lllllcffal rylkqkvsyk vtqasynvls rpmwinllsl mfmfcmvctf snhdklyhyr
      181 akmevaiheq rfedalkvge nslhtdsslv mlrayalskv krlgeelfey plqggseall
      241 pngesvkmlm lptneiqhyi gksmkssmkv vpylefleqh hlgksaigdy llcaylldkr
      301 lddfvkllpk yyeinanlpk nyrealilyt hlrsqpavty tnnvmdadye dyqtiakkyp
      361 ntlvrktkvr diygktywyy yqyssng
//
LOCUS       WP_257995982            3180 aa            linear   BCT 02-MAR-2025
DEFINITION  sialoglycan-binding domain-containing protein [Lactobacillus
            iners].
ACCESSION   WP_257995982
VERSION     WP_257995982.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus iners
  ORGANISM  Lactobacillus iners
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (residues 1 to 3180)
  AUTHORS   Bensing,B.A., Loukachevitch,L.V., McCulloch,K.M., Yu,H., Vann,K.R.,
            Wawrzak,Z., Anderson,S., Chen,X., Sullam,P.M. and Iverson,T.M.
  TITLE     Structural Basis for Sialoglycan Binding by the Streptococcus
            sanguinis SrpA Adhesin
  JOURNAL   J Biol Chem 291 (14), 7230-7240 (2016)
   PUBMED   26833566
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042446.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20164.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3180
                     /organism="Lactobacillus iners"
                     /db_xref="taxon:147802"
     Protein         1..3180
                     /product="sialoglycan-binding domain-containing protein"
                     /calculated_mol_wt=347852
     Region          16..41
                     /region_name="YSIRK_signal"
                     /note="YSIRK type signal peptide; pfam04650"
                     /db_xref="CDD:428049"
     Region          224..>566
                     /region_name="hyperosmo_Ebh"
                     /note="hyperosmolarity resistance protein Ebh, N-terminal
                     domain; TIGR04264"
                     /db_xref="CDD:275090"
     Region          1447..1549
                     /region_name="GspA_SrpA_N"
                     /note="GspA/SrpA SigLec-like domain; pfam20164"
                     /db_xref="CDD:466315"
     Region          1775..1844
                     /region_name="Rib"
                     /note="Rib domain; pfam08428"
                     /db_xref="CDD:462474"
     Region          <2031..2095
                     /region_name="RibLong"
                     /note="Long Rib domain; pfam18957"
                     /db_xref="CDD:436864"
     Region          2113..2226
                     /region_name="GspA_SrpA_N"
                     /note="GspA/SrpA SigLec-like domain; pfam20164"
                     /db_xref="CDD:466315"
     Region          2238..2316
                     /region_name="Rib"
                     /note="Rib domain; pfam08428"
                     /db_xref="CDD:462474"
     Region          2346..2444
                     /region_name="GspA_SrpA_N"
                     /note="GspA/SrpA SigLec-like domain; pfam20164"
                     /db_xref="CDD:466315"
     Region          2447..2527
                     /region_name="Rib"
                     /note="Rib domain; pfam08428"
                     /db_xref="CDD:462474"
     Region          2532..2629
                     /region_name="YPDG_rpt"
                     /note="YPDG domain; NF038186"
                     /db_xref="CDD:439498"
     Region          2733..2833
                     /region_name="YPDG_rpt"
                     /note="YPDG domain; NF038186"
                     /db_xref="CDD:439498"
     Region          2839..2914
                     /region_name="Big_6"
                     /note="Bacterial Ig domain; pfam17936"
                     /db_xref="CDD:465576"
     Region          2925..2993
                     /region_name="aRib"
                     /note="Atypical Rib domain; pfam18938"
                     /db_xref="CDD:465921"
     Region          2998..3063
                     /region_name="Big_6"
                     /note="Bacterial Ig domain; pfam17936"
                     /db_xref="CDD:465576"
ORIGIN      
        1 mfgknnkkmr dleqrekvty ygirkfsvgv vsvaisaafl lsgqtryvla deqpaiesrn
       61 dkqlviskqe haddgvnska nntqsvskqa tntqlvtgqv vhtsfpkgva nqttssfvds
      121 atqrkennve nqnaikvvng ydstdknpsg aqvkkaapva ekhsdktqsa keqtdsladk
      181 tkanqsekde kgstskrmte aqrkdltqav qslkqqiegl ktedkkavee ivaayigaqa
      241 vlsdvnvnqt vghaaleslk rtqslakqlv tlshfqsrsa qtgdkydvsd ilnrasahlr
      301 qersigqmrg nreynekllg sytelggggs gydlytqifr nkrnglfgqd pnfdgmnian
      361 aekdvwarvt pledgsgyfw einfnlgrne hqhpkyfftv pknqkitkat vvyrenddky
      421 ktfaangena lktifrddik riedtqaefs dnlnktpgdd gnfaslvypa nngkwvdqye
      481 itdpkmhpew kdrldqdakr rdqlinkikd nsqtvyfiqp hngkngysir fetkgplerd
      541 kntrkyylag frsqeyntyn ltlqmygrld sdisviekyp lhvrrngrfy inqgkaincd
      601 nvyrlkengq kvdfsfwgdi dkakregkyk pgdfgkfsda kgedlidsgy mvlnggkngq
      661 dahsdigkld lnrylagehs dswkapsgka kwgegdltwt vydnkghehl lsdantpgvn
      721 hfqfkrmqtv ngktetelyn imfvikpktp sllkeervgk rlplkltnaa gtrknlvasn
      781 gtkgvpmvly knvngrfepm qeeytetvte ttyneqgipt tikkqvtkkr dlqvvandkg
      841 eavfknilie dgatyavktv vyekqeyidq dgstkqkves dlsnkhvaki ytptlaetek
      901 tavndavnvq kndkdnlltp eeaneikaki innlkakfgk dydkevenvq vitkkvernk
      961 nafpeaydah kllgnqdtae agdaficykd ggvvkitrdl tirmktaevk plegnsvqag
     1021 atkiklanfs tgaegitlfg kdhkqsqlkl engkwtidsa hnaagiqsvd knadgtltvt
     1081 fneplnqdtt ittqvtdgnd dkkpfrsemk qaavvartdk atypqqvtag vsqwnkdtkk
     1141 ltdeakkkvi adleqkitgl ngnvkvtind qlislgdthf isvnatypdg yqdshsvqli
     1201 ltddvpakvt mkatdnkvtv qnqvitvqan kdfsfqasav dehshivhdv rtenrpswln
     1261 snegtvqndy ntathnqrnt kgsdkvpyvv tlsgtapmkp gthvftvktw dganpensgs
     1321 qqvtlkvear pltgatqtve vndtnalskl tpesfvpqnv ktglgngvty twnngkaptn
     1381 atinttgqtv eiqatfadhs psttiqgkli vqdtklaqld vvaekgakve hgtavqtvat
     1441 nvqnfpgnpp tlttyvnepm ivhvkvkdns nkitdaklng nssfvqsddr eyqknnrakk
     1501 gsakdpytit ftgtpttkgt kntridtwdg antqgwvpln ivtkeqaaqf dgqavsgdtq
     1561 rvevnastad lkpenfvsaa tkalykkatg gvtytftqgk ltnntvtsgq gqdvsitatf
     1621 sdhstrtitg klvvfdqtnp taditvssta pgqapriedk ngvkevhvyg tedftitvqa
     1681 qdnsgkvaei alvqngkpgs ypfpltqqts gvgssaqpkv ltltgatgkn tnnqsdstql
     1741 segaqwnnra iqvkdesnht tiinlrvinh qqttkydpqe qavtvkastk alpeaksais
     1801 nvkslpngtq ytwmnespvt qsgkrqvkvt ypdgssdtvd vtvtyqddva ptitfptsht
     1861 yegvavthfy rgepvditih atdadsnmkk lwlsngdknr terqigadit glnvqsqlng
     1921 knasyhitgt vptdfadsyt vgnnqavgak kftrlfnaed qngnksaidn stkfmyivhe
     1981 raekytasyg qlpitvgtks ashssiefkd iskgrlfage vanssykave ktvdkpngtt
     2041 ftlmnpvdgv qidsktgklt lqgqakqvgq tipikvkvty sdksfdivdv smkirddipa
     2101 dvqyeagkgs qvngttvtvy aneafefkan vtdntgivyd aeyngdnlsw lnndkqtyqa
     2161 kykqdtggkr ntlgskehpy vltftgtapn vkntthqgki rtwdyqdans gaesgftlvv
     2221 ksqsenytdh sdlksklqgt sqdvevnneh pvqpnaeqsv sqatkemlkd kgvtyswktn
     2281 hvpdtrtvge ktgivvvtfk dgstldisna kvnvkdtvkp vitrwsissd wkgeqpkied
     2341 kngvkeihvy gtekftltvr atdnsglvqs igvvhngkag tlgfttkdtl tgtgttadpk
     2401 qltmtgatgp nikdkdgysn rtfkvtdaag nsveqqfkiv vhqqttkyea tvaagaiekd
     2461 ygatlteeei kakvsvpqys qgkpayqvsl agklpsttsa gnhqvdvkvt ypdgstdivq
     2521 vpvsikaqpq kdayeltyap eqvepgkslt tqvptlkkgn etivsktgiv tsysiaedlk
     2581 tkgysvtneg rltipasesa tkvgqklaia vqvtyhdgtt ektiaqvsvt spnkidrtnd
     2641 knapipsgyl rvtlqagegt iyqgdaqakt ydvkvntale sadypqvksq dnyrpyqwsv
     2701 aagtvitetm dpdknnqvti eskatlktav tieprygtek gtigetiiig sptfykenng
     2761 qvttdvaqgl drrmqytldk andhvtidas tgvihytpia selngkdekt vtipvtvtyd
     2821 drsidkvnvt vtikratsae ptvstvhtqs keisgtgvdg stvkvtipgv dqpiettvan
     2881 gkwsvnvptg kkltagekiq vtqtevdkkv sgtvekaisk akaedyvtpv kttvnnpsql
     2941 teedkgkikt aiktsnpeik addkitigdn gnttiefpdg skkvtptkdl vveratsaep
     3001 tvstvhtqsk eisgtgvdgs tvkvtipgvd qpiettvang kwsvnvptgk kltagekiqv
     3061 tqtepnkkpt sktvkvvgvi yrhgdplvne kpmfnyqten pdytvpngea plgihqtsqq
     3121 kqttdnlsql eakqrvkaas rkkvlpntgs hasqtwggwi ltlgglitll agkkrkkede
//
LOCUS       WP_257996322             531 aa            linear   BCT 02-MAR-2025
DEFINITION  YSIRK-type signal peptide-containing protein [Lactobacillus iners].
ACCESSION   WP_257996322
VERSION     WP_257996322.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus iners
  ORGANISM  Lactobacillus iners
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016529.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04650.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Lactobacillus iners"
                     /db_xref="taxon:147802"
     Protein         1..531
                     /product="YSIRK-type signal peptide-containing protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=60590
     Region          17..>227
                     /region_name="PspC_subgroup_1"
                     /note="pneumococcal surface protein PspC, choline-binding
                     form; NF033838"
                     /db_xref="CDD:468201"
     Region          21..42
                     /region_name="YSIRK_signal"
                     /note="YSIRK type signal peptide; cl22626"
                     /db_xref="CDD:451412"
ORIGIN      
        1 mgisknnlqn klqqearqvp hfgirklaig tasvllstsl yfgamgrlvq ananvatgnn
       61 venekinsgk kdtdratndh veqpkknidg gqcllvkdgk ydqqqwqnqy neearnries
      121 kqavydlede lsqvseskra elikelqqpl steqrkqkvq eikktinkiv qdtlpsakke
      181 ahdkvqkmen lidpdkipyy nkikqaknkk elreieqqae lealkketsd yitlqynnyh
      241 snaelddrqn qeyknwankr ldlyakialh petelssead khdfnklkav layarraads
      301 vitgwdtdqd lyhnqtidyy shifadghmt drkqyiandw skgkpysgql idpsniseqi
      361 trqadgtyew qvsfnnnnlk tgkarfyftv prdqeiiedq nhamevyrdg dknhmsitaa
      421 nmqgvsridd kaqqltnmvn eiaaqpdwgs lkqkfamrhg dttgavdpdw dkdaysggnr
      481 vpdrrgfwin sfidgytynp gwarsgqckt lqgiifglnd ggvilislll v
//
LOCUS       WP_257996344             615 aa            linear   BCT 02-MAR-2025
DEFINITION  ADP-ribosylglycohydrolase family protein [Lactobacillus iners].
ACCESSION   WP_257996344
VERSION     WP_257996344.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus iners
  ORGANISM  Lactobacillus iners
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (residues 1 to 615)
  AUTHORS   Takada,T., Iida,K. and Moss,J.
  TITLE     Cloning and site-directed mutagenesis of human ADP-ribosylarginine
            hydrolase
  JOURNAL   J Biol Chem 268 (24), 17837-17843 (1993)
   PUBMED   8349667
REFERENCE   2  (residues 1 to 615)
  AUTHORS   Piatigorsky,J., Horwitz,J. and Norman,B.L.
  TITLE     J1-crystallins of the cubomedusan jellyfish lens constitute a novel
            family encoded in at least three intronless genes
  JOURNAL   J Biol Chem 268 (16), 11894-11901 (1993)
   PUBMED   8505315
REFERENCE   3  (residues 1 to 615)
  AUTHORS   Fitzmaurice,W.P., Saari,L.L., Lowery,R.G., Ludden,P.W. and
            Roberts,G.P.
  TITLE     Genes coding for the reversible ADP-ribosylation system of
            dinitrogenase reductase from Rhodospirillum rubrum
  JOURNAL   Mol Gen Genet 218 (2), 340-347 (1989)
   PUBMED   2506427
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03747.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Lactobacillus iners"
                     /db_xref="taxon:147802"
     Protein         1..615
                     /product="ADP-ribosylglycohydrolase family protein"
                     /calculated_mol_wt=70365
     Region          <94..229
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 mnnmniiril nnrlnsnltp tnhesfnstf fgnsnkynrn vfvkvfdsvn kfntenlitq
       61 qlsdrvletf kinddglkyv lvmndlkpid lentvsihqa yemgivlakf hnivkpfngm
      121 keensyfski sedinklenv tqkyklksll kefsnlqpli endlnehsnt vlhgdvgirn
      181 fkiingaltl idyerarlgp nyqdfiklff qdfklnnsli ssflkgyest sihtvqlksw
      241 tqqfiifata vgimkyteki kdapfkkigm qmlesvedyf kykkylisfi svsygdalgv
      301 pgthysgsti mnlygenaay hfnlkvnrsr tvikkwqlgq stddsnqfiq ecdalatswd
      361 rdylwkelrk idlpyrktst stgkmlslde phvslkgdgn gclimalsyg mrfsietlsl
      421 ekkwqqlidg itlthngnkv listvllssl fsyilkknsi stslnmafke ayefckftgl
      481 qeqnfltkly nnwlfsnkal krlanlseqk rgnigfsvke smsiifaivg kycginketi
      541 tledimldif kiggdtdsig aivfgiigps fllypkkdnl killdqnrkl yskidttylk
      601 ylalnkvllp sfktn
//
LOCUS       WP_257996397             120 aa            linear   BCT 02-MAR-2025
DEFINITION  DDE-type integrase/transposase/recombinase, partial [Lactobacillus
            helveticus].
ACCESSION   WP_257996397
VERSION     WP_257996397.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus helveticus
  ORGANISM  Lactobacillus helveticus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (residues 1 to 120)
  AUTHORS   Dyda,F., Hickman,A.B., Jenkins,T.M., Engelman,A., Craigie,R. and
            Davies,D.R.
  TITLE     Crystal structure of the catalytic domain of HIV-1 integrase:
            similarity to other polynucleotidyl transferases
  JOURNAL   Science 266 (5193), 1981-1986 (1994)
   PUBMED   7801124
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012870.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00665.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Lactobacillus helveticus"
                     /db_xref="taxon:1587"
     Protein         1..>120
                     /product="DDE-type integrase/transposase/recombinase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <10..>120
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 mfiaeqfpvl calmelerak vasikkyhyk pstpeetagn llkrdfnadk pnqkwctdit
       61 ekkipghnqk iflctvfdly drypvgyals rrndialvqa alddawakep nshamldsdr
//
LOCUS       WP_257996429             139 aa            linear   BCT 02-MAR-2025
DEFINITION  lanthionine synthetase LanC family protein [Lactobacillus
            helveticus].
ACCESSION   WP_257996429
VERSION     WP_257996429.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus helveticus
  ORGANISM  Lactobacillus helveticus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (residues 1 to 139)
  AUTHORS   Xie,L., Chatterjee,C., Balsara,R., Okeley,N.M. and van der
            Donk,W.A.
  TITLE     Heterologous expression and purification of SpaB involved in
            subtilin biosynthesis
  JOURNAL   Biochem Biophys Res Commun 295 (4), 952-957 (2002)
   PUBMED   12127987
REFERENCE   2  (residues 1 to 139)
  AUTHORS   Mayer,H., Bauer,H., Breuss,J., Ziegler,S. and Prohaska,R.
  TITLE     Characterization of rat LANCL1, a novel member of the lanthionine
            synthetase C-like protein family, highly expressed in testis and
            brain
  JOURNAL   Gene 269 (1-2), 73-80 (2001)
   PUBMED   11376939
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05147.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Lactobacillus helveticus"
                     /db_xref="taxon:1587"
     Protein         1..139
                     /product="lanthionine synthetase LanC family protein"
                     /GO_process="GO:0031179 - peptide modification [Evidence
                     IEA]"
                     /calculated_mol_wt=15424
     Region          7..>127
                     /region_name="LanC_like"
                     /note="Cyclases involved in the biosynthesis of
                     lantibiotics, and similar proteins; cl04955"
                     /db_xref="CDD:471159"
ORIGIN      
        1 mgeattcsli ygklgailal knelkdidmt atihkaksai ieleskkqln lglffglagt
       61 tlfefytntt feqnyslikl leriknepqn ntlcngyagi tlalqlisnk kgypdftkhi
      121 tsmlkklkkd irvtakhll
//
LOCUS       WP_257996456             509 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ABC transporter substrate-binding protein
            [unclassified Microbacterium].
ACCESSION   WP_257996456
VERSION     WP_257996456.1
KEYWORDS    RefSeq.
SOURCE      unclassified Microbacterium
  ORGANISM  unclassified Microbacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="unclassified Microbacterium"
                     /db_xref="taxon:2609290"
     Protein         1..509
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=54309
     Region          40..491
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mkrmplavaa avaatlalag csgggtpsps egggaegpda lnignfldvt swdpsladig
       61 fdgpylsavy dalialdadg tpipslatkw tvadddlsid ldirtdavfs dgtpvdadav
      121 vasleylkag arsgeayvna kgfekvdddt vrialtqrdd tilylmglgr syvmspasie
      181 agtlgsdpig sgpyvldsdt svagaeyhft ktedhwdaet ypfaelaiyp itdatarhna
      241 mlsgqinvqy gdvanldqae qqgwntaqrv sgwaglvitd htgakseplg klevrqalny
      301 afdgaavlaa vgsgagvatn qvfpdggdin dpelndayaf nmdkakella dagypdgfdi
      361 smpmspifem wkpsaeqaln elgitvtwdn mqmpdyqlna pnypmfisfl amdgndvatv
      421 srqltsvqwf npepdyakne viaplvekvq tergdaqtaa ikelnealvd qawwsvwyqa
      481 nniyytapgi qlqpvvgmmf ptlryitqg
//
LOCUS       WP_257996520            1167 aa            linear   BCT 02-MAR-2025
DEFINITION  PKD domain-containing protein [Microbacterium sp. UMB0228].
ACCESSION   WP_257996520
VERSION     WP_257996520.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. UMB0228
  ORGANISM  Microbacterium sp. UMB0228
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040138.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18911.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1167
                     /organism="Microbacterium sp. UMB0228"
                     /db_xref="taxon:2029109"
     Protein         1..1167
                     /product="PKD domain-containing protein"
                     /calculated_mol_wt=119872
     Region          629..785
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          796..869
                     /region_name="PKD_4"
                     /note="PKD domain; pfam18911"
                     /db_xref="CDD:436824"
     Region          802..1115
                     /region_name="COG3291"
                     /note="Uncharacterized conserved protein, PKD repeat
                     domain [Function unknown]"
                     /db_xref="CDD:442520"
     Region          872..953
                     /region_name="PKD_4"
                     /note="PKD domain; pfam18911"
                     /db_xref="CDD:436824"
ORIGIN      
        1 mgnsavwkra rtgvaglivg vmvtaglval gggaaaaadd pgglppllqr denvvtsdpi
       61 ptvqidngyv waqttigstv yavgkfdnar epkaapgtal taranvlayd idtgallpfa
      121 pqvngvikav aaspdgtriy iggsfnkvng kdrwniaaid aktgelvpgf vpsiggsgvy
      181 alatsgttvy agglftqang tprknlaafd ttngalrpwa pqtdlqvdam vmdpagndti
      241 vggrfsqvng ntemrgsasv dkttgalnte welaktvkng agsgiyagka gtfglaadat
      301 gvygtgwgfa daatgslegt faaeagtgkv rwiadcigdh ygvystgkvv yttshthtce
      361 tlglhpeqap rvhryseayt adargtlapq pgapgrkdwg gspapspyaw spdwavgvtt
      421 glgqaglsit gtgnmisigg efrsvnngrf eglvrfsttp pggakdgprl sgdkwtptat
      481 slasgavkvs ipanwdrddl tltyelrrag spapllttkv dstwwnlpav tfedttapag
      541 sqqtytftat dgdgntvtsa satvtaagtt ppysaailad epqlyyplgt vaqdvagtns
      601 pifragtkpq ssgvpqglag ataldgtetg rvdtttkmra pesysaemwf qtsttsggll
      661 fdfessaagf srnhdrnvyl sndgrlnfgv ydgstkvitt kaayndnrwh hvvasvspeg
      721 mklfvdgeln dqitgvtkgq dyegfwkigr gklanwpntp nslsltgavd efavypygls
      781 aaqvkthywv gkgstapvaa ftatatgldv afdastsvpp gsttisdyrw dfgdgstgtg
      841 ktpthtyakp gtypvkltvt dsqnlvgsvt kpvvvqgana lptasftlsv sgltvsadas
      901 astdadgtvr syrwdwgdgt tgegasatht yatagtrtvt ltvtddvggs atttreavva
      961 epaplasdef drtagpgwge alaggawkit ggsaaaasva dgsgqlklaa gdtrhatlna
     1021 psvpnptlet tfrvdqpsst ggsyigviar dssagrylvr awlrpdgtvw lvahrdgtvl
     1081 atralsgvav tpgtaytlkv avtgtdktsl vaklwaadta epadwqlrat daaplpaggv
     1141 glsgsrsasa taplgvsfdt frvraae
//
LOCUS       WP_257995994             431 aa            linear   BCT 02-MAR-2025
DEFINITION  MurT ligase domain-containing protein [Corynebacterium xerosis].
ACCESSION   WP_257995994
VERSION     WP_257995994.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium xerosis
  ORGANISM  Corynebacterium xerosis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (residues 1 to 431)
  AUTHORS   Noldeke,E.R., Muckenfuss,L.M., Niemann,V., Muller,A., Stork,E.,
            Zocher,G., Schneider,T. and Stehle,T.
  TITLE     Structural basis of cell wall peptidoglycan amidation by the
            GatD/MurT complex of Staphylococcus aureus
  JOURNAL   Sci Rep 8 (1), 12953 (2018)
   PUBMED   30154570
  REMARK    Erratum:[Sci Rep. 2018 Dec 21;8(1):18073. doi:
            10.1038/s41598-018-37082-9.. PMID: 30573753]
            Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019952.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08353.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Corynebacterium xerosis"
                     /db_xref="taxon:1725"
     Protein         1..431
                     /product="MurT ligase domain-containing protein"
                     /calculated_mol_wt=44815
     Region          <42..>288
                     /region_name="murD"
                     /note="UDP-N-acetylmuramoylalanine--D-glutamate ligase;
                     TIGR01087"
                     /db_xref="CDD:273436"
     Region          313..411
                     /region_name="MurT_C"
                     /note="MurT ligase C-terminal; pfam08353"
                     /db_xref="CDD:462442"
ORIGIN      
        1 mtkssksrrm sprsriataa akaatwasrr tgrgsggmig gliaqkldpr ilgqlgggrp
       61 aaiitgtngk stttrmlaaa mraagdrvat neggdnmdag visalmaspg adtlvlevde
      121 lhvahiaadl kpkvllllnl srdqldrvge inkiegslra avdanpqatv iancddplia
      181 saawdaknvv wvsagggwtn datscprtgg piirdgddwy avkelpggga frrpapawti
      241 tddgiatpyg ttipldltlp gaanrgnatl ataaavelgs eatvaatate gvdnvagrys
      301 tvrvgdhevr mllaknpagw qealsmvdrd adgvviavng hvadgedlsw lwdvvfenfg
      361 gmsvmasger gtdlavrlly agiehdllhd pleaiaacpp grvevlanyt afrdlkkaie
      421 rraaaseser s
//
LOCUS       WP_257996521             328 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: VWA domain-containing protein [unclassified
            Microbacterium].
ACCESSION   WP_257996521
VERSION     WP_257996521.1
KEYWORDS    RefSeq.
SOURCE      unclassified Microbacterium
  ORGANISM  unclassified Microbacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024909.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13519.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="unclassified Microbacterium"
                     /db_xref="taxon:2609290"
     Protein         1..328
                     /product="VWA domain-containing protein"
                     /calculated_mol_wt=34756
     Region          99..>244
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(106,191,216)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
ORIGIN      
        1 malanvwmlv laaavvvaav aiglavglrr hrdrraadta rvaraerlra lpsfrqalsr
       61 ravaltglla lgagaalvag vvaarpmsaq tiqpvdtsrd imlcldvsgs msevdvevls
      121 vfdemldgfe gerigltifn sspvqifplt ddydfirehl asmmssfdyv deipehwlgt
      181 lngdgaslig dglaactmgf dhpdddrsrs vifatdnein gasivtldea aayaaskdvr
      241 vfainpvegk dadvsaelaa aaeatggaay glrdtttvad iidevqkqea talrgeaqvv
      301 wtdtpnlwia vlsvlalgfv vlvwrvrl
//
LOCUS       WP_257996538             362 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF998 domain-containing protein [unclassified
            Microbacterium].
ACCESSION   WP_257996538
VERSION     WP_257996538.1
KEYWORDS    RefSeq.
SOURCE      unclassified Microbacterium
  ORGANISM  unclassified Microbacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017959.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06197.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="unclassified Microbacterium"
                     /db_xref="taxon:2609290"
     Protein         1..362
                     /product="DUF998 domain-containing protein"
                     /calculated_mol_wt=36665
ORIGIN      
        1 mdtrerlrge gravlatvvc fvggalagal llggpprplt gegglalpaa gvaggitala
       61 fvistllhrr eeaagmprwq ravsrlsaaa ltvafgavta mgvlltaevl aaglrglalg
      121 aiggglltgv aaavggrlaf gagiglrtad lagllfgflv igtlfamvta vdprwweenf
      181 sqlgvgwafn gtlvvagllv atvgayigrd lhrllgddal sriatvvvlw aaaglalaav
      241 gllplyrapv phdiaavaal llflgaaaat tltvpgrpla lvvtsvvvgv lvvaavllww
      301 plgffpvtav eavvvglgll wmttlvrvla ilvpegtrps arpslrqgrq srevrrvrap
      361 ga
//
LOCUS       WP_257996571             424 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [unclassified Microbacterium].
ACCESSION   WP_257996571
VERSION     WP_257996571.1
KEYWORDS    RefSeq.
SOURCE      unclassified Microbacterium
  ORGANISM  unclassified Microbacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="unclassified Microbacterium"
                     /db_xref="taxon:2609290"
     Protein         1..424
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=43945
     Region          17..386
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(25..26,29..30,33,69,119..120,122..124,127,146,
                     149..150,153,230,233..234,237..239,242,270,274,328..329,
                     333,337,353,356..357,360..361,364)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340946"
ORIGIN      
        1 mtsphlpvrg agrawvmlvv ltmltvigmt vvlpvlpfvv lqyvahehdl alwvgvleav
       61 nglcaflaap llgrlsdrfg rrpviivaaf gaafsmalfg vggaiwvlvl arviqgltag
      121 dlpalfayla ditppekraq rfgllgaltg igtmigpaig gllaaidlrl pvfltaavgl
      181 tiavlsifll peslrpenri arialrdvqp fgvfrtafgr pelrglmiaf allalpfgff
      241 vnnfsvlald aiqwgptqig lltagvgiid iliqgvllgi llprmgergv ivsaitaqai
      301 glaglaivas llaqpwlfiv galllaagqg aaqaamdgam snavgddeqg wlggatqsln
      361 aamgtiapli aaalytavsh aapywlgvgi mvvaalvvar ahiantakre lqaqeaveva
      421 evrv
//
LOCUS       WP_257996323            1864 aa            linear   BCT 02-MAR-2025
DEFINITION  sialoglycan-binding domain-containing protein [Lactobacillus
            iners].
ACCESSION   WP_257996323
VERSION     WP_257996323.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus iners
  ORGANISM  Lactobacillus iners
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (residues 1 to 1864)
  AUTHORS   Bensing,B.A., Loukachevitch,L.V., McCulloch,K.M., Yu,H., Vann,K.R.,
            Wawrzak,Z., Anderson,S., Chen,X., Sullam,P.M. and Iverson,T.M.
  TITLE     Structural Basis for Sialoglycan Binding by the Streptococcus
            sanguinis SrpA Adhesin
  JOURNAL   J Biol Chem 291 (14), 7230-7240 (2016)
   PUBMED   26833566
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042446.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20164.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1864
                     /organism="Lactobacillus iners"
                     /db_xref="taxon:147802"
     Protein         1..1864
                     /product="sialoglycan-binding domain-containing protein"
                     /calculated_mol_wt=202014
     Region          308..428
                     /region_name="GspA_SrpA_N"
                     /note="GspA/SrpA SigLec-like domain; pfam20164"
                     /db_xref="CDD:466315"
     Region          <985..>1248
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          1668..1767
                     /region_name="He_PIG"
                     /note="Putative Ig domain; pfam05345"
                     /db_xref="CDD:398814"
     Region          1824..1864
                     /region_name="Gram_pos_anchor"
                     /note="LPXTG cell wall anchor motif; pfam00746"
                     /db_xref="CDD:366278"
ORIGIN      
        1 mlnegydvsk qpefkaksps avnksvrlvg dasdrlleri ntiqkrrdlv fmqtmidsda
       61 msfrfytrnv dpakrgrehk iesvigtrsf esntnhslvk lvdtyvsaqr pepvltqpit
      121 vplgvepdvk dgienlpeqq ksnrfswlsn nkpvvyeltq sgkpvlgeai sqdahrsian
      181 idlqipvnvv gvfkegqdfn tvkqgvtpgh mirvskagat gdfkaqtlny glsidkdgnl
      241 tgkpkikdwk pgecqrkvvl dltfngkatq vpitivrseq apavtiyegn ktdfaqnpdg
      301 nrvtntynnr islvfykgen ktytvaatdd qtikqatyql snnqplskdi kglkvndqdq
      361 aikaqsnkkg aktdpyrfti sgpvstskqg tsdyvkpghy trqivavdne glkttytfdi
      421 evrekaqnar lagnelhrtv gdtfsevyqn kadanqlttg tkpagitwgf egktpldivt
      481 kegnqykhnr agyfeyvata tfsdnsvvkt tgekdhehvr itvkpqtpsf taselneagn
      541 vknkqltinv qkglpkgavv tvysdqagqn aighatvgrd dqesvqvtvs kvpvgklyvq
      601 tavtgpdqcy ltkqpvtvks dmgegtttkl paqatltltn ngnetikpyt tvdnktktit
      661 iiagkqfdin gdvtdridvi kdtvvqpshe negksaeswm npvekgpdgt qakrdrnyqk
      721 qysqrdskre slgskanpyk vslsgtapek igkyyikfqt wngddraett ewkvkvvtpa
      781 pklegglfgg reesakhpwy npngysintm vskgidrlty tvtdkngkii ersdklddnf
      841 vihedlykna dgsyrenedf tltiaankyd ngdeaecclp tvktvkfqwk dfdiptftrd
      901 ekrkgtiiyi ngkekgfipd gkqgeqgkqg qagkngtsvt iksitsdksg nhvitfsdgk
      961 svtvengkng ingkngesfi dphvdkngdl yvtvvdangn ksqkkighvk gdkgdpgkdg
     1021 ityapvvekg kdgvttikfy pvdpktgepd ktkqplksev tvkdgkdgrd gksitkaeid
     1081 knghlivtig egadaktvda gpakgadgkt paievadlkd gdkvigkkit vkvdgqadqv
     1141 feikngrdgk dgkdgityap vvekgkdgvt tikfypvdpk tgepdktkqp lksevtvkdg
     1201 kdgrdgksit kaeidknghl ivtigegada ktvdagpakg adgktphikv sdkvngetti
     1261 tidgynddgt ayhkevkvsd gityapvatk gedgvttikf ypvdpktgkp dttkqpvggd
     1321 vqvkngvngk dgksvtsayv dantghlmit iegqanpida glvkglsakv dikrneentg
     1381 vditvtqekw dnngnltket ttntvydgvg pkievaeqgn shiititdqi rdregikdkp
     1441 nakpqvievk dgkdgetpti tkgegkdeng hvfttvtftt skgsttvvip ngkdgkdgrd
     1501 gkdcqgtcgi cdnrdfkpvk fdaryedgad lgriqlrfip velgdrpsnv taavkhtrsr
     1561 rslgdqevan agllnlmats vlvgsdreav dspaedktvq gpiantykve glldgmvfnp
     1621 edatitgkak itdwkdgetk rrvpirvtvy nsdgstkvae sdivvtrtlt skpsvqgtst
     1681 pdtsipnpgk smsyvgvvpg trpyytlkmi grplpkgikf dsttgtftgt akvddwqdge
     1741 vsriypfvvt vvncdgkqyk aedsitiyrk inpepapvpe ptpvpepmpv pepapvpepm
     1801 pvpeptpvpe papvpekpvs tdktptsgke klpqtgetsd iaslvaalcl aaglvvlpkk
     1861 keqd
//
LOCUS       WP_257996607             123 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: helix-turn-helix domain-containing protein
            [unclassified Microbacterium].
ACCESSION   WP_257996607
VERSION     WP_257996607.1
KEYWORDS    RefSeq.
SOURCE      unclassified Microbacterium
  ORGANISM  unclassified Microbacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 123)
  AUTHORS   Ren,J., Sainsbury,S., Nettleship,J.E., Saunders,N.J. and Owens,R.J.
  TITLE     The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals
            a novel protein fold incorporating a helix-turn-helix motif
  JOURNAL   Proteins 78 (7), 1798-1802 (2010)
   PUBMED   20196080
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013540.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01381.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="unclassified Microbacterium"
                     /db_xref="taxon:2609290"
     Protein         1..123
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=13143
     Region          <34..85
                     /region_name="HipB"
                     /note="Transcriptional regulator, contains XRE-family HTH
                     domain [Transcription]; COG1396"
                     /db_xref="CDD:441006"
ORIGIN      
        1 mktpaeqfne avgrqmraei aaarssiaam arnvgiarsa ldnyvtgkra ipvpvvyavc
       61 atlgvephvl varaeerlaa dgmsaivtpl rrrtdvatpr dnarevafes gstretdtdd
      121 lye
//
LOCUS       WP_257996620             161 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6993 domain-containing protein [unclassified
            Microbacterium].
ACCESSION   WP_257996620
VERSION     WP_257996620.1
KEYWORDS    RefSeq.
SOURCE      unclassified Microbacterium
  ORGANISM  unclassified Microbacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046846.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22504.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="unclassified Microbacterium"
                     /db_xref="taxon:2609290"
     Protein         1..161
                     /product="DUF6993 domain-containing protein"
                     /calculated_mol_wt=16254
ORIGIN      
        1 mlrsvlpsra aalvlfagvs aaflagcape ptatptptvt ataaptppap palvpdgsag
       61 dnlpvftava eqvwgteqrg egrayvdglv aagfdrdamq ltpdqstvgn paesiqfsvr
      121 wgeeecligq vgpstgavvt tvmpqlaggr clvgatrpid w
//
LOCUS       WP_257996658             395 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [unclassified Microbacterium].
ACCESSION   WP_257996658
VERSION     WP_257996658.1
KEYWORDS    RefSeq.
SOURCE      unclassified Microbacterium
  ORGANISM  unclassified Microbacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="unclassified Microbacterium"
                     /db_xref="taxon:2609290"
     Protein         1..395
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=38777
     Region          12..357
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(19..20,23..24,27,59,109..110,112..114,117,137,
                     140..141,144,214,217..218,221..223,226,253,257,308..309,
                     313,317,333,336..337,340..341,344)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mtdstrprla plylagftta fgahgiaaal gaetedigwt llafgftlal ydlaevllkp
       61 lfgalsdrvg vrpvilggll afaafsvvga lapgmiglvi arfgqgaaas afspassaav
      121 arltdeasrg ryfgrygswk slgyalgpll gavlvvaggi palfwalavl glaaagwvlv
      181 avpavpvlpr krvtlvdlgr ellapgflvp tlvlaattga lavavgflpl lgreaglgtv
      241 gsmaivtvla vvssivqplv gaahdrgpls vrlgavggll ligvgvglsa lwvtpvvlal
      301 tgvlvgagvg latpvafshl aastpaermg rtmgsaelgr elgdaggplv agavatatvp
      361 avgigviaal tagagalall glrppradar ptgag
//
LOCUS       WP_257996663             321 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Microbacterium sp.
            UMB0228].
ACCESSION   WP_257996663
VERSION     WP_257996663.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. UMB0228
  ORGANISM  Microbacterium sp. UMB0228
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Microbacterium sp. UMB0228"
                     /db_xref="taxon:2029109"
     Protein         1..321
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=33742
     Region          <204..321
                     /region_name="GlxA"
                     /note="Transcriptional regulator GlxA, contains an amidase
                     domain and an AraC-type DNA-binding HTH domain
                     [Transcription]; COG4977"
                     /db_xref="CDD:444002"
ORIGIN      
        1 msdskgnrgt aadvaegmvt vdadalsavl gtvdlrvgia rrvrlspggl lplppgritl
       61 vyladgavhg hpplgtgcrl dvdrdsqqlt vedpghrdrl vagdaflllr gdtfaleada
      121 dtallvvdie ladtasplpa llppfltvtg fdalepaaaa laenmgvvda aacpvrqgdp
      181 licrmmattv llsvirawaa ngcapagwps lskdpfldrv vdaiheqpgr dwtverlaav
      241 gamsrsafae rfrlavgrsp adyvtevrid aakrmlqagq svssvsrelg yasdegfsra
      301 frrrtgmtps swrashslvp a
//
LOCUS       WP_257996683             311 aa            linear   BCT 02-MAR-2025
DEFINITION  bifunctional DNA primase/polymerase [Microbacterium sp. UMB0228].
ACCESSION   WP_257996683
VERSION     WP_257996683.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. UMB0228
  ORGANISM  Microbacterium sp. UMB0228
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 311)
  AUTHORS   Lipps,G., Weinzierl,A.O., von Scheven,G., Buchen,C. and Cramer,P.
  TITLE     Structure of a bifunctional DNA primase-polymerase
  JOURNAL   Nat Struct Mol Biol 11 (2), 157-162 (2004)
   PUBMED   14730355
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020811.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09250.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Microbacterium sp. UMB0228"
                     /db_xref="taxon:2029109"
     Protein         1..311
                     /product="bifunctional DNA primase/polymerase"
                     /calculated_mol_wt=32860
     Region          32..168
                     /region_name="Prim-Pol"
                     /note="Bifunctional DNA primase/polymerase, N-terminal;
                     pfam09250"
                     /db_xref="CDD:430484"
     Site            order(50,94,96,131,153)
                     /site_type="active"
                     /note="polymerase nucleotide-binding site [active]"
                     /db_xref="CDD:240129"
     Site            order(51,55,160,166)
                     /site_type="DNA binding"
                     /note="DNA-binding residues [nucleotide binding]"
                     /db_xref="CDD:240129"
     Site            order(81,94,96,125,128..129,131,153,160)
                     /site_type="other"
                     /note="nucleotide binding site [chemical binding]"
                     /db_xref="CDD:240129"
     Site            order(94,96,131,153)
                     /site_type="other"
                     /note="primase nucleotide-binding site [nucleotide
                     binding]"
                     /db_xref="CDD:240129"
     Region          231..283
                     /region_name="PriCT_1"
                     /note="Primase C terminal 1 (PriCT-1); cl07362"
                     /db_xref="CDD:447340"
ORIGIN      
        1 mtmpeaprge rqpmdaaall asltglspsa aacryaeagi pvfpcvtggk rpltkrgfhe
       61 asteprqvar wwarwprani gmptgqisgl evvdvdvhga irgfaafela rregltdrwa
      121 afirtpsggv hayypadpel vqpswqvpra gidfrgsggy vivppsiiat nagpsayali
      181 gsgrgdavpv daralrqfld prparptpvi pvegtdgvdv eriarwvemr gegernrglf
      241 wascrlieag ippdrvraal gpaaeraglp apeiettirs ahrvargaps aptassvpsh
      301 aaqpssgqvl s
//
LOCUS       WP_257996692             412 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [unclassified Microbacterium].
ACCESSION   WP_257996692
VERSION     WP_257996692.1
KEYWORDS    RefSeq.
SOURCE      unclassified Microbacterium
  ORGANISM  unclassified Microbacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="unclassified Microbacterium"
                     /db_xref="taxon:2609290"
     Protein         1..412
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=41700
     Region          58..406
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(72,127..128,130..132,135,155,158..159,162,235,
                     238..239,242..244,247,276,280,330..331,335,339,356,
                     359..360,363..364,367)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 msatpglgtr raglrwmslf tlswlaiwtv qltpvqlllp lqldtpeddw irgvvssgiv
       61 lgvgglagvv agplagalsd raragahrrr pwalggvalt avclvftgfa dgpwaigagw
      121 vgvsigvavs saaftaliad qlpttqrgaa saavgssqav givlgvglvv llglgivagy
      181 lllagiiavv gvaaalllpd ppstealrpp rigrprlasl rdrdfawmls grlvtnigna
      241 lgtalflffl lhglgqestt aqdnlllliv vytvfvvlas vitgiisdrt gerrrlavga
      301 tivqaasgvv ivaaptfemt mvaaalmgvg ygafstvgla faadllpdeq dhardlgivn
      361 vtaalgqlig pvlgaglval aggfwlvfla aavlslvgga ltaaarprvl sa
//
LOCUS       WP_257996763             550 aa            linear   BCT 02-MAR-2025
DEFINITION  di-heme oxidoredictase family protein [Akkermansia muciniphila].
ACCESSION   WP_257996763
VERSION     WP_257996763.1
KEYWORDS    RefSeq.
SOURCE      Akkermansia muciniphila
  ORGANISM  Akkermansia muciniphila
            Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
            Verrucomicrobiales; Akkermansiaceae; Akkermansia.
REFERENCE   1  (residues 1 to 550)
  AUTHORS   Goonesekere,N.C., Shipely,K. and O'Connor,K.
  TITLE     The challenge of annotating protein sequences: The tale of eight
            domains of unknown function in Pfam
  JOURNAL   Comput Biol Chem 34 (3), 210-214 (2010)
   PUBMED   20537955
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018269.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06537.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Akkermansia muciniphila"
                     /db_xref="taxon:239935"
     Protein         1..550
                     /product="di-heme oxidoredictase family protein"
                     /calculated_mol_wt=61104
     Region          93..550
                     /region_name="CCP_MauG"
                     /note="Di-haem cytochrome c peroxidase; cl42173"
                     /db_xref="CDD:478002"
ORIGIN      
        1 meyrqfakpa avlvlgagaa awaivnsggs gdaspeqsfi pdtarnagvl ghprisgral
       61 inpaqgsask fdnikaeymt ascvschvnr grdftppvlr tkegepgpay ylggekgtvf
      121 natskafeqe spaiteaglt nrfkageiif egnfvpvkrn rfgglgptyi kssclachpg
      181 ygrgqrtgnf drqygngyla fvhnpdgapv kgytgmlqtk avppfvpyak gvkiewhdfv
      241 dqygnkypdg tpynagkpte gtltyptadv iepllplpsd yrvsiestig iygtglldai
      301 rdediiaeyr rqqsmtgpvk gipgkwidep dgtrrlgkft wdcsratlen gpganalwnv
      361 tnvtrknrpn iymtpewlek qkelgidvsg legpqeeels mqqyedfmvw hrglavpaar
      421 nldkpdvrrg qelfnklgct gchkpewttg eykplpgyan qtirpytdml rhdmgeinrg
      481 rsrfwrtppl wgrglmhkta nhtdmfhdlr ardfeeailw hfgesefsre mfrhlsaker
      541 gqliqflksl
//
LOCUS       WP_257996781             348 aa            linear   BCT 02-MAR-2025
DEFINITION  YadA-like family protein [Haemophilus parainfluenzae].
ACCESSION   WP_257996781
VERSION     WP_257996781.1
KEYWORDS    RefSeq.
SOURCE      Haemophilus parainfluenzae
  ORGANISM  Haemophilus parainfluenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (residues 1 to 348)
  AUTHORS   Sandt,C.H. and Hill,C.W.
  TITLE     Nonimmune binding of human immunoglobulin A (IgA) and IgG Fc by
            distinct sequence segments of the EibF cell surface protein of
            Escherichia coli
  JOURNAL   Infect Immun 69 (12), 7293-7303 (2001)
   PUBMED   11705900
REFERENCE   2  (residues 1 to 348)
  AUTHORS   Hoiczyk,E., Roggenkamp,A., Reichenbecher,M., Lupas,A. and
            Heesemann,J.
  TITLE     Structure and sequence analysis of Yersinia YadA and Moraxella
            UspAs reveal a novel class of adhesins
  JOURNAL   EMBO J 19 (22), 5989-5999 (2000)
   PUBMED   11080146
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015831.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03895.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Haemophilus parainfluenzae"
                     /db_xref="taxon:729"
     Protein         1..348
                     /product="YadA-like family protein"
                     /calculated_mol_wt=37388
     Region          119..>277
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          287..348
                     /region_name="YadA_anchor"
                     /note="YadA-like membrane anchor domain; pfam03895"
                     /db_xref="CDD:427576"
ORIGIN      
        1 mknitfkssl iallvagmgi gtataatvdd ldkivtrhgk vigahekviq ahekviqthe
       61 gaikthegai kthegvinnh sdqladhndk lvkykrtidn hdsvitaheg viqthekviq
      121 thegviqnhe kaiqthegai kthegvlqth egaiktlega iqthekviqa hekaiqtheg
      181 aikthegvlq thegvlqthe gvlqthegai kthegvlqth enainaqkav lnthenaina
      241 hkaaldrhet eiresranva glntridslg reiknglstq aalnglfqpy nvgklnisaa
      301 vggyrdktal avgsgfrfne kfamkagvav nanggggmay nvganfef
//
LOCUS       WP_257996906             508 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Lactobacillus iners].
ACCESSION   WP_257996906
VERSION     WP_257996906.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus iners
  ORGANISM  Lactobacillus iners
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Lactobacillus iners"
                     /db_xref="taxon:147802"
     Protein         1..508
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=54690
     Region          61..161
                     /region_name="YPDG_rpt"
                     /note="YPDG domain; NF038186"
                     /db_xref="CDD:439498"
     Region          167..>232
                     /region_name="Big_6"
                     /note="Bacterial Ig domain; pfam17936"
                     /db_xref="CDD:465576"
     Region          258..322
                     /region_name="aRib"
                     /note="Atypical Rib domain; pfam18938"
                     /db_xref="CDD:465921"
     Region          326..>391
                     /region_name="Big_6"
                     /note="Bacterial Ig domain; pfam17936"
                     /db_xref="CDD:465576"
ORIGIN      
        1 mkvntalesa dypqvksqdn yrpyqwsvaa gtvitetmdp dknnqvties katlktavti
       61 eprygtekgt igetiiigsp tfykenngqv ttdvaqgldr rmqytldkan dhvtidastg
      121 vihytpiase lngkdeetvt ipvtvtyddr sidkvnvtvt ikratsaept vstvhtqske
      181 itgtgekgak isvafpggkt atgqvdehgk fkvgvptgvs ltkdqeitvt qtetnkkpts
      241 ktvkvvpsqa dglkkptekv wvdndkklsp seqksvkdkv eelnkkdnqk ptvtvgdnge
      301 ttvvfpdgsq atipgnelvq ekgqsaeptp vaphtqskei tgtgekgaki svafpggkta
      361 tgqvdehgkf kvgvptgvsl tkdqeitvtq tetnkkptsk tvkvvgviyr hgdplvnekp
      421 mfnyqtenpd ytvpngeapl gihqtsqqkq ttdnlsqlea nqrvkaasrk kvlpntgsha
      481 sqtwggwilt lgglitllag kkrkkede
//
LOCUS       WP_257996921             194 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Klebsiella
            pneumoniae].
ACCESSION   WP_257996921
VERSION     WP_257996921.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..194
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=22006
     Region          <1..>41
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Region          <75..190
                     /region_name="PRK10840"
                     /note="transcriptional regulator RcsB; Provisional"
                     /db_xref="CDD:182771"
ORIGIN      
        1 maaspdyvln itqvdsteqa laavadnnvd vfftefnyll nhkewsaeis srftslckth
       61 hvrrvllvpe lpygllkkvl emkfeltisq qdeltelkke lpallmadgq kpsisswlrr
      121 vmrsgsrars ilsarewevl hlivegfstt eiarhrnrsv stiatqkhna mkklnlsnhs
      181 elikyvqavg kmee
//
LOCUS       WP_257997095             795 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Akkermansia muciniphila].
ACCESSION   WP_257997095
VERSION     WP_257997095.1
KEYWORDS    RefSeq.
SOURCE      Akkermansia muciniphila
  ORGANISM  Akkermansia muciniphila
            Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
            Verrucomicrobiales; Akkermansiaceae; Akkermansia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024824.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13432.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Akkermansia muciniphila"
                     /db_xref="taxon:239935"
     Protein         1..795
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=88692
     Region          75..331
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          76..104
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(77,80..81,84..85,87,113,116..117,120..121,123..124,
                     150,153..154,157..158,161)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          111..141
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          149..172
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          183..215
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          347..447
                     /region_name="CpoB"
                     /note="Cell division protein CpoB, coordinates
                     peptidoglycan biosynthesis and outer membrane constriction
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG1729"
                     /db_xref="CDD:441335"
     Region          425..528
                     /region_name="CpoB"
                     /note="Cell division protein CpoB, coordinates
                     peptidoglycan biosynthesis and outer membrane constriction
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG1729"
                     /db_xref="CDD:441335"
     Region          522..782
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          640..669
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(642..643,646..647,649,676,679..680,683..684,
                     686..687,713,716..717,720..721,724)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          674..704
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          685..782
                     /region_name="CpoB"
                     /note="Cell division protein CpoB, coordinates
                     peptidoglycan biosynthesis and outer membrane constriction
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG1729"
                     /db_xref="CDD:441335"
     Region          712..735
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mfsasqenip daapiadgpl vanpeqdtld madmlykqaq apatkenrqe ygrlldlslr
       61 kyleftqrfp qsaqaplaey raamcleelg rkdeahglfl rliqtgspal vaasayrlat
      121 dassageidk aiqyyqlvir naeqndlkvd aqyrlgrlfl ssgnpeaaat mfcavmgnpe
      181 adakfvlvsr mgyaalcadt grlgeaysey rkvletpgvd nrnrgiatlq aamlatklkk
      241 taeaqglyer llkdeslkem apearmglll glynmgkyre ilsqyeqqkg ikmptkdgqv
      301 rllmllgqsa yklkeyrkaa dffleaeksv pytqeamqas fyrllcynel kqkdlpqraq
      361 sflnhyakaf ptselhdmvr lmaaenlfss npadaarfya sidfdkvppk mradilyksa
      421 waiaqagnrg vaaklltdfi ndfpkdpric ealtlrgdmy aktkkeaeal mdfdrviarw
      481 pkaesaaaaw qraaqiyagr qdmanmakyy egliqnfpka spaalaeahf llgraafdqg
      541 dfkssishma eaktldpqky geqvnvlsvl syhklqdmnk lkealetlqk enpsavarvp
      601 dvipawlglq aygmkdleta dkymtwatqn dqlqnvkkvi wrnlakvrla lrkydralva
      661 snnflkdedq pyrradgmld kasillglgk yadarktaed alalgvegpl maslkivlgd
      721 isyaekkfde aakhygvtae lfvndaelkp kalfkaaeal dkagrkseas qyrgrlqkef
      781 pdwkqdgesl ppdar
//
LOCUS       WP_257997190             237 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: polymer-forming cytoskeletal protein [Bacillus
            amyloliquefaciens group].
ACCESSION   WP_257997190
VERSION     WP_257997190.1
KEYWORDS    RefSeq.
SOURCE      Bacillus amyloliquefaciens group
  ORGANISM  Bacillus amyloliquefaciens group
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 237)
  AUTHORS   Kuhn,J., Briegel,A., Morschel,E., Kahnt,J., Leser,K., Wick,S.,
            Jensen,G.J. and Thanbichler,M.
  TITLE     Bactofilins, a ubiquitous class of cytoskeletal proteins mediating
            polar localization of a cell wall synthase in Caulobacter
            crescentus
  JOURNAL   EMBO J 29 (2), 327-339 (2010)
   PUBMED   19959992
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016408.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04519.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Bacillus amyloliquefaciens group"
                     /db_xref="taxon:1938374"
     Protein         1..237
                     /product="polymer-forming cytoskeletal protein"
                     /calculated_mol_wt=24570
     Region          23..124
                     /region_name="CcmA"
                     /note="Cytoskeletal protein CcmA, bactofilin family
                     [Cytoskeleton]; COG1664"
                     /db_xref="CDD:441270"
ORIGIN      
        1 mevtdklvin gsgsskggrf htveingsgt vsgdvectsl lfngsgktdg hvktqtltis
       61 gsgkisgsae aesiringtg vikgdvkter lnvagfssfg ggvkaddifi sgkagiegdc
      121 etetfrsegk ckiggllnad evsmklaage srvkeigcrh lkvmsrksvl trfklmpapv
      181 ltaeliegdi ieladtnakt vrgnhvriga gctigtveys gdftcdpsal vnkvvkr
//
LOCUS       WP_257997201             650 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Bacillus
            amyloliquefaciens].
ACCESSION   WP_257997201
VERSION     WP_257997201.1
KEYWORDS    RefSeq.
SOURCE      Bacillus amyloliquefaciens
  ORGANISM  Bacillus amyloliquefaciens
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus amyloliquefaciens group.
REFERENCE   1  (residues 1 to 650)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Bacillus amyloliquefaciens"
                     /db_xref="taxon:1390"
     Protein         <1..650
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..>631
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
ORIGIN      
        1 qvkvrgyrie lseievrlaq ladvhdaavt avedkagnta lcayvapqqn diealkaalk
       61 dtlpdymvpa fwvelaelpv tangkidkka lpepdieags aaykapetem etllsdiwqe
      121 vlgldqigvs dnfftlggds ikgiqmasrl nqhgyklemk dlfqhptiee lvsyverteg
      181 kqadqgpveg eadltpiqrw ffeknftdkh hwnqsvmlha kdgfdpeite ktlhvltvhh
      241 dalrmiyreq kpyyrgleda svelnvfeln gpaedhedri ereadrlqss isletghllk
      301 aglfraedgd hlllaihhlv vdgvswrill edftsvytql kqgnepalpp kthsfaefae
      361 rikeyantka flkeadywre leekevctql pkdrqsgdqr mrhtrtvsfs ltpeqteqlt
      421 tnvheayhte mndilltalg lalkewtged tigvhleghg redildglni trtvgwftsm
      481 ypmilemkha ddlsyqlkqm kedirhipnk gvgygilryv tapehkenls fkidpdisfn
      541 ylgqfnemsd sglftrsgmp sgqslspdte kpnaldivgf iengqmtmtf ayhslefhek
      601 tiqsfsdsfk ghllkiidhc laqdgpeltp sdlgdddltl deldklmeil
//
LOCUS       WP_257997263             858 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase [Corynebacterium tuscaniense].
ACCESSION   WP_257997263
VERSION     WP_257997263.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium tuscaniense
  ORGANISM  Corynebacterium tuscaniense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (residues 1 to 858)
  AUTHORS   de la Cruz,J., Kressler,D. and Linder,P.
  TITLE     Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and
            related families
  JOURNAL   Trends Biochem Sci 24 (5), 192-198 (1999)
   PUBMED   10322435
REFERENCE   2  (residues 1 to 858)
  AUTHORS   Aubourg,S., Kreis,M. and Lecharny,A.
  TITLE     The DEAD box RNA helicase family in Arabidopsis thaliana
  JOURNAL   Nucleic Acids Res 27 (2), 628-636 (1999)
   PUBMED   9862990
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012492.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00270.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..858
                     /organism="Corynebacterium tuscaniense"
                     /db_xref="taxon:302449"
     Protein         1..858
                     /product="DEAD/DEAH box helicase"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=91385
     Region          79..845
                     /region_name="DECH_helic"
                     /note="helicase/secretion neighborhood putative DEAH-box
                     helicase; TIGR03817"
                     /db_xref="CDD:274800"
ORIGIN      
        1 mpvislkpad pvswrriffs atatksamiy aftsenvnif thfcvfpsaf sggaavtvpg
       61 sfaselidsi srtlpagtlt hvrtlpaqpa rtvpwpswad eelrrlwees gvqalythqa
      121 qcaqlawert nvvvatgtss gkslgyqlpv lttlatdpta camyltptka lgsdqllavs
      181 slikdhpvlg ngtktaanpa pydgdtptea rstirettrf vftnpdmlha gilsshpkwv
      241 rllrnlkyvi vdechtyrgv fganvalvlr rldrlarayg aepvfilasa taadpaahar
      301 nltgrsvvav tedgaptgek tfalwepgfi egaegengap vrhsatteaa ammaelvaag
      361 artltfvrsr raaetvamra aetvamraae dlvakgradf asriasyrag ylaedrrale
      421 kaldsgdllg mattnalelg idvggldavv magfpgtvas frqqagrsgr rgqsslvvmv
      481 ardepmdtyl vhhpealldk pvensvfnpq npfilrghvy caaverplte edvaafgadd
      541 vvaeltfagf lrrrprgwfa vpqltgditp etahglvslr ggtgeevmiv datdgrllgt
      601 idsgraaaqv hngavyihqg eyfiideldl dnyvalahpe mpdystmars ttdiavigep
      661 harvnpspgl wvanvdvkvt dhvtgyvvrl sdgtvsehip ldlpeqtlvt ravaytidpv
      721 vldeigispg dvpgalhaae haaigllpll atcdrwdigg vstalhpdtm qptvfvydgh
      781 pggagfadeg yarfhewika tyeavkscrc asgcpscvqs pkcgngnqpl dkagalkllg
      841 alvtmtagls ariapprl
//
LOCUS       WP_257997323             648 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Corynebacterium tuscaniense].
ACCESSION   WP_257997323
VERSION     WP_257997323.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium tuscaniense
  ORGANISM  Corynebacterium tuscaniense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (residues 1 to 648)
  AUTHORS   Zhang,Y.L., Arakawa,E. and Leung,K.Y.
  TITLE     Novel Aeromonas hydrophila PPD134/91 genes involved in O-antigen
            and capsule biosynthesis
  JOURNAL   Infect Immun 70 (5), 2326-2335 (2002)
   PUBMED   11953367
  REMARK    Erratum:[Infect Immun 2002 Jun;70(6):3308]
REFERENCE   2  (residues 1 to 648)
  AUTHORS   Swartley,J.S., Liu,L.J., Miller,Y.K., Martin,L.E., Edupuganti,S.
            and Stephens,D.S.
  TITLE     Characterization of the gene cassette required for biosynthesis of
            the (alpha1-->6)-linked N-acetyl-D-mannosamine-1-phosphate capsule
            of serogroup A Neisseria meningitidis
  JOURNAL   J Bacteriol 180 (6), 1533-1539 (1998)
   PUBMED   9515923
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025025.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13641.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Corynebacterium tuscaniense"
                     /db_xref="taxon:302449"
     Protein         1..648
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=73083
     Region          10..149
                     /region_name="Glft2_N"
                     /note="Galactofuranosyltransferase 2 N-terminal;
                     pfam17994"
                     /db_xref="CDD:436195"
     Region          170..435
                     /region_name="Glyco_tranf_2_3"
                     /note="Glycosyltransferase like family 2; pfam13641"
                     /db_xref="CDD:433372"
     Region          450..647
                     /region_name="GlfT2_domain3"
                     /note="Galactofuranosyltransferase-2, domain 3; pfam19320"
                     /db_xref="CDD:437152"
ORIGIN      
        1 metttavdvl qrvlmpkkge phdvrmlyli eaeqnkqrlt wsgrtsfnil ageevsfety
       61 fnafpasywr rwsqldtvvl amdvqgaati svyrskhdgv risvtnveak darveiplkl
      121 anfedggwlw fdvnaesdat itdagwfaph epkeqvlpdg stiapsekkv avgiptfnrp
      181 rdavnalhal aedpfvleai tdvlmpdqgn qhpadepdfk eaeanlagrl kifqqgnlgg
      241 sggysrimye alnqtdapfi lymdddiaie pdsilravqa aryakspilv ggqmlnlqdr
      301 sqlrttgetv dpnifmfsaa khavydhdfa kyplgyvgte eedldprktt srplhrridv
      361 dyngwwmnlf prvvaekmgl plplfikwdd neyalrakea gfptvtwpgv aiwhmawadk
      421 ddaidwqayf hmrnrlivas iygpenpeam lknmlkstlk hyvcmeysti aiqneamkdf
      481 lagpdqlfdi lesslpriqe irkgfpdaqv lpsaadlpaa tgapgvptnk mggrlakikk
      541 ipwaaksllh lrkpedrahw eapqlnltae earwytlarv dsatvstagg tgvafrkrdk
      601 elaktlldeq krlraeikdr waelkrtyre arpeltshen wkkifdeq
//
LOCUS       WP_257997332             107 aa            linear   BCT 02-MAR-2025
DEFINITION  integrase core domain-containing protein [Corynebacterium
            tuscaniense].
ACCESSION   WP_257997332
VERSION     WP_257997332.1
KEYWORDS    RefSeq.
SOURCE      Corynebacterium tuscaniense
  ORGANISM  Corynebacterium tuscaniense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025063.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13683.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Corynebacterium tuscaniense"
                     /db_xref="taxon:302449"
     Protein         1..107
                     /product="integrase core domain-containing protein"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=11733
     Region          <1..53
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 mfhtmktrty ypktfttlgq adawvsawvq vynatphsgi nyyppqavlh gtwiklqhqr
       61 ekgmrnaldk gvitqlpnta agtglpaevs iirtttqtap apqpiti
//
LOCUS       WP_257997647             829 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Komagataeibacter saccharivorans].
ACCESSION   WP_257997647
VERSION     WP_257997647.1
KEYWORDS    RefSeq.
SOURCE      Komagataeibacter saccharivorans
  ORGANISM  Komagataeibacter saccharivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae; Komagataeibacter.
REFERENCE   1  (residues 1 to 829)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Komagataeibacter saccharivorans"
                     /db_xref="taxon:265959"
     Protein         1..829
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=92077
     Region          4..820
                     /region_name="EAL"
                     /note="EAL domain. This domain is found in diverse
                     bacterial signaling proteins. It is called EAL after its
                     conserved residues and is also known as domain of unknown
                     function 2 (DUF2). The EAL domain has been shown to
                     stimulate degradation of a second...; cl29561"
                     /db_xref="CDD:453023"
ORIGIN      
        1 msspllekls lavmiadgsg rivysnspar emtghneaem adtrlgrlfp dlshacepmp
       61 vegarkchtt lrrrdglgvp vhlcreginw nghsyelvcl hdrteeernr eeveiskliv
      121 hatdrgilvl dpqyrithan railallgte advlhgmafs sllsdtqgdi etlrqfqqhl
      181 shrtgfeldm rtrtpqgrel rlrcavtphy atnetlsdii vvlhdithdq qlrelqrdvv
      241 ealtdqfpld vmldfmcrri eliapdcmav amlgsgptvr pgghgniplp mlhaleglea
      301 sttggacgta mataeevvva dfatetrwpe lratmrahgi aaewavpiil rngdvagsfs
      361 lyfrnpgapd vwhrrivsac vhlamlaieq qrsresiirl sytdrltslp nrmwlnrrmq
      421 eldnrqtaap islmiidldr frkivealgq gradqlllel srrlrhgiag rdvlirtegd
      481 efviiteena pdvtllaeri ihnleepftv dgipvsisgs igicthiddq dmeetlrqay
      541 talaqakkag rgcyrffhps mtrqaddhvi lasslreaia drrlnlvyqp qvnvltgrlh
      601 gvealsrwtd pvlgtippgr fipvaeetgq iralgawslr vaceqmaewi argvavptvs
      661 vnlsaiqfqd pelvsqlatv lhqtnvpper liveltettm ienfeqtmtt avairnlgig
      721 lsmddfgtgy sslanlaslp inevkidrsf mkgfgstgnv rqvvtaiiri ghtlgmtvia
      781 egveeaeqci qlraigcdvi qgyyfahpmd aesldtwire rrfqsalnp
//
LOCUS       WP_257997713             112 aa            linear   BCT 02-MAR-2025
DEFINITION  FliM/FliN family flagellar motor switch protein [Komagataeibacter
            saccharivorans].
ACCESSION   WP_257997713
VERSION     WP_257997713.1
KEYWORDS    RefSeq.
SOURCE      Komagataeibacter saccharivorans
  ORGANISM  Komagataeibacter saccharivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae; Komagataeibacter.
REFERENCE   1  (residues 1 to 112)
  AUTHORS   Paul,K. and Blair,D.F.
  TITLE     Organization of FliN subunits in the flagellar motor of Escherichia
            coli
  JOURNAL   J Bacteriol 188 (7), 2502-2511 (2006)
   PUBMED   16547037
REFERENCE   2  (residues 1 to 112)
  AUTHORS   Brown,P.N., Mathews,M.A., Joss,L.A., Hill,C.P. and Blair,D.F.
  TITLE     Crystal structure of the flagellar rotor protein FliN from
            Thermotoga maritima
  JOURNAL   J Bacteriol 187 (8), 2890-2902 (2005)
   PUBMED   15805535
REFERENCE   3  (residues 1 to 112)
  AUTHORS   Chen,L.M., Kaniga,K. and Galan,J.E.
  TITLE     Salmonella spp. are cytotoxic for cultured macrophages
  JOURNAL   Mol Microbiol 21 (5), 1101-1115 (1996)
   PUBMED   8885278
REFERENCE   4  (residues 1 to 112)
  AUTHORS   Bischoff,D.S. and Ordal,G.W.
  TITLE     Identification and characterization of FliY, a novel component of
            the Bacillus subtilis flagellar switch complex
  JOURNAL   Mol Microbiol 6 (18), 2715-2723 (1992)
   PUBMED   1447979
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013236.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01052.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Komagataeibacter saccharivorans"
                     /db_xref="taxon:265959"
     Protein         1..112
                     /product="FliM/FliN family flagellar motor switch protein"
                     /calculated_mol_wt=12650
     Region          <2..79
                     /region_name="fliM"
                     /note="flagellar motor switch protein FliM; Reviewed;
                     PRK12795"
                     /db_xref="CDD:237208"
ORIGIN      
        1 mfeekivpls eilslqpgkq itfphqsgtp ihvrlqcgqt plfegrlgkl hdkaavkiek
       61 rlfrpktrtl milvvssppe tagrksrlek svpfitkrrf magpqwetnc rc
//
LOCUS       WP_257997730             141 aa            linear   BCT 02-MAR-2025
DEFINITION  CheR family methyltransferase [Komagataeibacter saccharivorans].
ACCESSION   WP_257997730
VERSION     WP_257997730.1
KEYWORDS    RefSeq.
SOURCE      Komagataeibacter saccharivorans
  ORGANISM  Komagataeibacter saccharivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae; Komagataeibacter.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   Djordjevic,S. and Stock,A.M.
  TITLE     Crystal structure of the chemotaxis receptor methyltransferase CheR
            suggests a conserved structural motif for binding
            S-adenosylmethionine
  JOURNAL   Structure 5 (4), 545-558 (1997)
   PUBMED   9115443
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013867.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01739.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Komagataeibacter saccharivorans"
                     /db_xref="taxon:265959"
     Protein         1..141
                     /product="CheR family methyltransferase"
                     /calculated_mol_wt=16054
     Region          <44..105
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
ORIGIN      
        1 mcvcwrqtlt grswrrlqah lyrgrdrghs ggekvpvhdp cgqgnlrfsg nicrlpafrv
       61 lnlnanwpik gtfsaifcrn vviyfdeetr enlwrrladg lipagsfmsv ilngsspeas
      121 avwsrlprpf tgkftepwrh r
//
LOCUS       WP_257997757             254 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Listeria monocytogenes].
ACCESSION   WP_257997757
VERSION     WP_257997757.1
KEYWORDS    RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Listeria monocytogenes"
                     /db_xref="taxon:1639"
     Protein         1..>254
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          12..>246
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mfsniinlpk niryrflisf fnrifsscyi pvlpiymsgy isssevslal alilclnilg
       61 nfiggvlgdn ynlkqliali rgietiifvs lavciwasin iwtiiilfsl vtftsslrvp
      121 lfdmlvfnav ssenqnyvfs lsywinnigf svgyllsafv fkgnmfsiic mgiivniisi
      181 painsleddy tsqsksnvka nlievikiyq nkkfiifsfg silllflelq lsnfigifln
      241 rnfidtifhy kvtg
//
LOCUS       WP_257997885             319 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaA ATPase domain-containing protein [Salimicrobium jeotgali].
ACCESSION   WP_257997885
VERSION     WP_257997885.1
KEYWORDS    RefSeq.
SOURCE      Salimicrobium jeotgali
  ORGANISM  Salimicrobium jeotgali
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Salimicrobium.
REFERENCE   1  (residues 1 to 319)
  AUTHORS   Erzberger,J.P., Pirruccello,M.M. and Berger,J.M.
  TITLE     The structure of bacterial DnaA: implications for general
            mechanisms underlying DNA replication initiation
  JOURNAL   EMBO J 21 (18), 4763-4773 (2002)
   PUBMED   12234917
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012529.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00308.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Salimicrobium jeotgali"
                     /db_xref="taxon:1230341"
     Protein         1..319
                     /product="DnaA ATPase domain-containing protein"
                     /calculated_mol_wt=36309
     Region          40..318
                     /region_name="PRK06921"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:180750"
ORIGIN      
        1 mqealkspel qkriaqakel aqqssnddep krnkpldtve cpdcdgtgai lykkevtrad
       61 gnvelrdffk scscaeqkkl errfqnalip eefeeagfkq ydrktevqkt lfnatlqymd
      121 nidttlkdkp kvnslgfiav ygeseirsmn paerysfkqa hnsfglgkth lqmalaryii
      181 envrvrdels dgslskhdrg cqvlcvsdve fmedliqakm sndegkmlqd liqgactvdv
      241 lvwddlgksk wseskegmyy qiinerwrhk rpiifssnea kgtlsdkigy aassrlfgmt
      301 gkenlyeveg qdhrlkeeg
//
LOCUS       WP_257997915             234 aa            linear   BCT 02-MAR-2025
DEFINITION  HAD hydrolase-like protein [Glutamicibacter arilaitensis].
ACCESSION   WP_257997915
VERSION     WP_257997915.1
KEYWORDS    RefSeq.
SOURCE      Glutamicibacter arilaitensis
  ORGANISM  Glutamicibacter arilaitensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Glutamicibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024811.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13419.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Glutamicibacter arilaitensis"
                     /db_xref="taxon:256701"
     Protein         1..234
                     /product="HAD hydrolase-like protein"
                     /calculated_mol_wt=24221
     Region          6..213
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     Site            order(9..13,108..109,145,167..168,171..172)
                     /site_type="active"
                     /db_xref="CDD:319798"
ORIGIN      
        1 msvtsvlfdl dgtlvdpaga itsgirhavt shgladpgea rvealvgppl qiglrtldgv
       61 tdenidsiia gyraryaevg mgqsviypgv vafldalrev gihvavttak piniarqlia
      121 rkgldahlda ihgnadehgs mgsskthiva ealqhgkldp atsvvvgdrh ydwdaarans
      181 vasigvawgf aqdgelqqad aiaattkela vlllgtqvaa klgldenlmq egak
//
LOCUS       WP_257997948             193 aa            linear   BCT 02-MAR-2025
DEFINITION  FRG domain-containing protein [Staphylococcus aureus].
ACCESSION   WP_257997948
VERSION     WP_257997948.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08867.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..193
                     /product="FRG domain-containing protein"
                     /calculated_mol_wt=23380
     Region          104..>193
                     /region_name="FRG"
                     /note="FRG domain; cl07460"
                     /db_xref="CDD:447389"
ORIGIN      
        1 mntkylylnf dkiyeekdff nvlhvdinlk iseikesnev lysidsitck klnhydpkle
       61 syrdsiylln erlnnynfng kkewklfyly keliqtfeil yddtsttnyy rgqandwpmk
      121 agllrndiid dlkkefeniy edmaykypdl ieytclnkke ykaedfkkre nnmaylqhyg
      181 lrttlidite npl
//
LOCUS       WP_257997985             223 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase domain-containing protein [Glutamicibacter
            arilaitensis].
ACCESSION   WP_257997985
VERSION     WP_257997985.1
KEYWORDS    RefSeq.
SOURCE      Glutamicibacter arilaitensis
  ORGANISM  Glutamicibacter arilaitensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Glutamicibacter.
REFERENCE   1  (residues 1 to 223)
  AUTHORS   Xiong,Y. and Eickbush,T.H.
  TITLE     Origin and evolution of retroelements based upon their reverse
            transcriptase sequences
  JOURNAL   EMBO J 9 (10), 3353-3362 (1990)
   PUBMED   1698615
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00078.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Glutamicibacter arilaitensis"
                     /db_xref="taxon:256701"
     Protein         1..223
                     /product="reverse transcriptase domain-containing protein"
                     /calculated_mol_wt=24839
     Region          27..>223
                     /region_name="YkfC"
                     /note="Retron-type reverse transcriptase [Mobilome:
                     prophages, transposons]; COG3344"
                     /db_xref="CDD:442573"
ORIGIN      
        1 mnpgeyflac svepaadgkd irdqqvdlwe qvfsrgnlli alkrvernkg sagvdgleah
       61 elrdwcrehw ietrksldag tyaplpvrqv mipkpdgger mlgvpsvldr liqqalaqvl
      121 spifdegfap msygfrpgks ahdaasmark vieqgyrwvv evdldaffdr vnhdvlmsri
      181 arkvkdkrvl klvrkyltag imaqgvrret aegtpqgspl spl
//
LOCUS       WP_257998038             374 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Glutamicibacter
            arilaitensis].
ACCESSION   WP_257998038
VERSION     WP_257998038.1
KEYWORDS    RefSeq.
SOURCE      Glutamicibacter arilaitensis
  ORGANISM  Glutamicibacter arilaitensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Glutamicibacter.
REFERENCE   1  (residues 1 to 374)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 374)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02770.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Glutamicibacter arilaitensis"
                     /db_xref="taxon:256701"
     Protein         1..374
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=40407
     Region          30..366
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(73,103,105,129,131,351..353,355,357)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mrtpwpptrw patapttsps prcgscarpg cwtcwlpaef ggagghfeta fevirilaaa
       61 dgsisqllay hyinqssiaf yapaeaqaaw wrrtveerwl wgdsvnpvdp alvltregag
      121 yrlngakrfs tgsgvgeviv vnaqvegtge llafvvprda qgleivddwd ylgqrlsasn
      181 slvyrnvrie padvlgpvtd epvstlltpg iqlafanfyv giaqgalerg kqillgrkna
      241 wflsaaetys qdpvfqrtvg elkartaava alaeklgrrf dallslagav tqpqraelav
      301 aiaelkvvat eagvevanrv fevtgssstq sgvgldlfwr nvrthslhdp vdykkievga
      361 yflrgesqpl slyt
//
LOCUS       WP_257998051             705 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein [Oligella urethralis].
ACCESSION   WP_257998051
VERSION     WP_257998051.1
KEYWORDS    RefSeq.
SOURCE      Oligella urethralis
  ORGANISM  Oligella urethralis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Oligella.
REFERENCE   1  (residues 1 to 705)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Oligella urethralis"
                     /db_xref="taxon:90245"
     Protein         1..705
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=80683
     Region          15..672
                     /region_name="rep"
                     /note="ATP-dependent DNA helicase Rep; TIGR01074"
                     /db_xref="CDD:130146"
ORIGIN      
        1 mshsthrqss ehsmglnamq leavkyldgp clvlagagsg ktrvitqkia ylintcgyna
       61 rgvlaltftn kaakemmerl kslvepslir dltvctfhal gvrflreeak faglkrgfsi
      121 ldatdaagii qemlsttdkg riravqqvis lwknqlilpe qaenlaqtpd eqdaarlyrs
      181 yeatlkayqa vdfddlillp vllmreyeev rerwqqrity llvdeyqdtn acqyewlkll
      241 tdfrqqftav gdddqaiyaw rgatvenlsr llsdypklkl ikleqnyrsv grileaannv
      301 iannpsvfsk klwssfeegs pvqvvvmdnd qaeaetvamr itqarfqqra dwkdfavlyr
      361 gnhqarvieq afremhipyv ltggqsffdk aevrdilayl rllvneeddp afiravttpk
      421 rgigqatltg lgelaaakei slyeaifede linyinekql qalrafahvi esirwqanrg
      481 raparavdll snpalyrsee rkapelldel mrfidyeryl ydsleersal srwqnvqell
      541 swlktkavee emdllqlvqr ialitmlers edeeeidavk lstihaskgl eypyvhligt
      601 eegllphlgk ddeygdpnke dggysdriqe errlmyvait raqkhltvtw ckkrrrared
      661 iicepsrfia emglesgvai ekdpfqgmsp kerlarlrdm ltqkk
//
LOCUS       WP_257998062             106 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1153 domain-containing protein [Oligella urethralis].
ACCESSION   WP_257998062
VERSION     WP_257998062.1
KEYWORDS    RefSeq.
SOURCE      Oligella urethralis
  ORGANISM  Oligella urethralis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Oligella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018350.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06627.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Oligella urethralis"
                     /db_xref="taxon:90245"
     Protein         1..106
                     /product="DUF1153 domain-containing protein"
                     /calculated_mol_wt=12250
     Region          7..101
                     /region_name="InsE"
                     /note="Transposase InsE and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2963"
                     /db_xref="CDD:442203"
ORIGIN      
        1 mtmstemkse nrrwtakrks alvldifkgk ttvseasrty dlspseiegw ieeategmen
       61 alrakphdir eqyerkvkdl qeayaeamle lrarkklqsl ldeeek
//
LOCUS       WP_257998066             635 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleoside recognition domain-containing protein [Oligella
            urethralis].
ACCESSION   WP_257998066
VERSION     WP_257998066.1
KEYWORDS    RefSeq.
SOURCE      Oligella urethralis
  ORGANISM  Oligella urethralis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Oligella.
REFERENCE   1  (residues 1 to 635)
  AUTHORS   Hantke,K.
  TITLE     Is the bacterial ferrous iron transporter FeoB a living fossil?
  JOURNAL   Trends Microbiol 11 (5), 192-195 (2003)
   PUBMED   12781516
REFERENCE   2  (residues 1 to 635)
  AUTHORS   Loewen,S.K., Ng,A.M., Yao,S.Y., Cass,C.E., Baldwin,S.A. and
            Young,J.D.
  TITLE     Identification of amino acid residues responsible for the
            pyrimidine and purine nucleoside specificities of human
            concentrative Na(+) nucleoside cotransporters hCNT1 and hCNT2
  JOURNAL   J Biol Chem 274 (35), 24475-24484 (1999)
   PUBMED   10455109
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019292.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07670.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Oligella urethralis"
                     /db_xref="taxon:90245"
     Protein         1..635
                     /product="nucleoside recognition domain-containing
                     protein"
                     /calculated_mol_wt=70001
     Region          <7..589
                     /region_name="FeoB"
                     /note="Fe2+ transporter FeoB [Inorganic ion transport and
                     metabolism]; COG0370"
                     /db_xref="CDD:440139"
ORIGIN      
        1 measvaprwf alkllegnav vqakllaiap alaeaiatvk qglaqqhpel davssiaatr
       61 haaasalchn ivrlpaksst sltalidkvv lnrylsfvvl alvvygtyel sivkgyeltn
      121 ytwpylakak nfivsllpap qlievplite fvvwlvnsal allnyvpifl ilfsiiaile
      181 dtgympriaf vldrvfnryg lhgqstlplv lggafvggca vpgimatkgi aderariati
      241 mtvpymncla kvpfytlllg affassmslm mffistvtff ialsvarvlt mtvlknrask
      301 pfmmelppyh lptvkgvllr avqrvwmyiy kvgtivmava vvlfvllqfp gvpaatkaaf
      361 eqrattmved fkasvqnspy aeslhsketi yqlvnlhnqy rsermvaass adrvkaldtr
      421 feqtypelfr fvkptnnder avnralrqla qksqllqnei kneriensll gsvsrfiepa
      481 tqwagfdwri nvaflssfaa resavatigs myeqgqgdrp eeafasaetg ytalhavaml
      541 ifmiftppci asmvvlklnv qsyklmllai alpfslgllf asafftlath fawdglhtmv
      601 yfyftvvait lvlgffrgsa vlpetsggqa syhyr
//
LOCUS       WP_257998077             617 aa            linear   BCT 02-MAR-2025
DEFINITION  transglycosylase SLT domain-containing protein [Oligella
            urethralis].
ACCESSION   WP_257998077
VERSION     WP_257998077.1
KEYWORDS    RefSeq.
SOURCE      Oligella urethralis
  ORGANISM  Oligella urethralis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Oligella.
REFERENCE   1  (residues 1 to 617)
  AUTHORS   Koraimann,G.
  TITLE     Lytic transglycosylases in macromolecular transport systems of
            Gram-negative bacteria
  JOURNAL   Cell Mol Life Sci 60 (11), 2371-2388 (2003)
   PUBMED   14625683
REFERENCE   2  (residues 1 to 617)
  AUTHORS   Mushegian,A.R., Fullner,K.J., Koonin,E.V. and Nester,E.W.
  TITLE     A family of lysozyme-like virulence factors in bacterial pathogens
            of plants and animals
  JOURNAL   Proc Natl Acad Sci U S A 93 (14), 7321-7326 (1996)
   PUBMED   8692991
REFERENCE   3  (residues 1 to 617)
  AUTHORS   Thunnissen,A.M., Rozeboom,H.J., Kalk,K.H. and Dijkstra,B.W.
  TITLE     Structure of the 70-kDa soluble lytic transglycosylase complexed
            with bulgecin A. Implications for the enzymatic mechanism
  JOURNAL   Biochemistry 34 (39), 12729-12737 (1995)
   PUBMED   7548026
REFERENCE   4  (residues 1 to 617)
  AUTHORS   Koonin,E.V. and Rudd,K.E.
  TITLE     A conserved domain in putative bacterial and bacteriophage
            transglycosylases
  JOURNAL   Trends Biochem Sci 19 (3), 106-107 (1994)
   PUBMED   8203016
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013618.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01464.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Oligella urethralis"
                     /db_xref="taxon:90245"
     Protein         1..617
                     /product="transglycosylase SLT domain-containing protein"
                     /calculated_mol_wt=65927
     Region          25..339
                     /region_name="mltD"
                     /note="membrane-bound lytic murein transglycosylase D;
                     Provisional; PRK10783"
                     /db_xref="CDD:182727"
     Region          <364..>545
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          459..613
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
ORIGIN      
        1 mrllvyalla ttaiisgcss tggnlksnta atskhynnvw driragyamp dlrdsrvdyw
       61 vnyytkrpgs vqtmanrsak yiyyvttelq krgmptelal lpfvesaynt talsrvkasg
      121 lwqfmpatgt dfnltqnwwr ddrrdpvsst qaainylayl ynfqgndwhl alasynwgqg
      181 svkrardrna aqgrgtdyls lnmpqetrdy vpklmafkri isqpakygit lphvpdqpyf
      241 eevnktvdid ievaaklagm slsefkemnp qfhrpvilae hgqrilipka nvasykknla
      301 nykgnlasys gytprsgeal adiaqrlgvd lallkqlngy takqtvains rtlmvprgsg
      361 ispsaspsgi rdtppapvqq pmpaasagpd mmlaliertr lpasavnppp aatpalaqqr
      421 vpapapvarp asttpraasa alvasntspa passtvdpla dliradgsma tavpalaanr
      481 pqtaapssaa svagtaalse qpaamlpnvg gnqslaaraa stvqrsgpvv qrvswdsept
      541 tsaarvrtaa yqppavpaap tatrnpashr vakgetlysl arqyhttvnd laalnnitvd
      601 glkagmvlrl pnsgveg
//
LOCUS       WP_257998098             314 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Oligella urethralis].
ACCESSION   WP_257998098
VERSION     WP_257998098.1
KEYWORDS    RefSeq.
SOURCE      Oligella urethralis
  ORGANISM  Oligella urethralis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Oligella.
REFERENCE   1  (residues 1 to 314)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 314)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 314)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Oligella urethralis"
                     /db_xref="taxon:90245"
     Protein         1..314
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=33888
     Region          1..303
                     /region_name="CeuA"
                     /note="ABC-type enterochelin transport system, periplasmic
                     component [Inorganic ion transport and metabolism];
                     COG4607"
                     /db_xref="CDD:443657"
ORIGIN      
        1 mkkifqimtl tatlaiaats lafelehttg tikgdktper ivsydlsild slnalgieav
       61 gvpksnykde lakfaeapkv gtlfepdyea lkalkpelif aggrsasaip elekiapvan
      121 ltnrnpefla dfrtntlrla aafdktkkae eglanidkdi adlqklnigk tgaflfimng
      181 niiphvigdr fgfvyeltgl esvlpaktae elatpatrpa pdspeakaaa akraqqikei
      241 akadpdwliv fdraaingge nagektlaeh pdlsqtsafk ngrvvyvdpa rwyvitggln
      301 nlkfltgdfl dkmk
//
LOCUS       WP_257998129             100 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase domain-containing protein, partial [Oligella
            urethralis].
ACCESSION   WP_257998129
VERSION     WP_257998129.1
KEYWORDS    RefSeq.
SOURCE      Oligella urethralis
  ORGANISM  Oligella urethralis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Oligella.
REFERENCE   1  (residues 1 to 100)
  AUTHORS   Xiong,Y. and Eickbush,T.H.
  TITLE     Origin and evolution of retroelements based upon their reverse
            transcriptase sequences
  JOURNAL   EMBO J 9 (10), 3353-3362 (1990)
   PUBMED   1698615
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00078.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Oligella urethralis"
                     /db_xref="taxon:90245"
     Protein         1..>100
                     /product="reverse transcriptase domain-containing protein"
     Region          2..>100
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 mrraggaagi dgqtlaqfge rlddnllqll nelktkqyra lpvkrveipk adggvrllgi
       61 psvrdrvvqq avkelltpif eeqfhpssfg yrpnrschda
//
LOCUS       WP_257998127             105 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Oligella urethralis].
ACCESSION   WP_257998127
VERSION     WP_257998127.1
KEYWORDS    RefSeq.
SOURCE      Oligella urethralis
  ORGANISM  Oligella urethralis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Oligella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00872.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Oligella urethralis"
                     /db_xref="taxon:90245"
     Protein         1..>105
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          2..>105
                     /region_name="Transposase_mut"
                     /note="Transposase, Mutator family; cl27632"
                     /db_xref="CDD:474953"
ORIGIN      
        1 mtkdddiiqs likqldlkps dgdsiealad klrkqlyeta laaeleehlg yskhargakt
       61 dgnsrngysk ktlktnkskv eldiprdrng tfepqiikkn qtrtg
//
LOCUS       WP_257998140             186 aa            linear   BCT 02-MAR-2025
DEFINITION  DDE-type integrase/transposase/recombinase, partial [Oligella
            urethralis].
ACCESSION   WP_257998140
VERSION     WP_257998140.1
KEYWORDS    RefSeq.
SOURCE      Oligella urethralis
  ORGANISM  Oligella urethralis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Oligella.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Dyda,F., Hickman,A.B., Jenkins,T.M., Engelman,A., Craigie,R. and
            Davies,D.R.
  TITLE     Crystal structure of the catalytic domain of HIV-1 integrase:
            similarity to other polynucleotidyl transferases
  JOURNAL   Science 266 (5193), 1981-1986 (1994)
   PUBMED   7801124
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012870.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00665.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Oligella urethralis"
                     /db_xref="taxon:90245"
     Protein         <1..>186
                     /product="DDE-type integrase/transposase/recombinase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <9..186
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 pkpanslsqe ereliltvcn raeyanlppc qivadlldkg ayiaseatfy rtlrqanrlh
       61 hrgrsrapkp shqptthhat gprqvwcwdi tycpsrvrgq fyylylvedi yrrkivgyev
      121 hetedsalaa allqrcvlse gclhqplvlh sdngapmkaq tlrikleels ikasysrprv
      181 sndnpf
//
LOCUS       WP_257998159             792 aa            linear   BCT 02-MAR-2025
DEFINITION  LamG-like jellyroll fold domain-containing protein [Zhihengliuella
            halotolerans].
ACCESSION   WP_257998159
VERSION     WP_257998159.1
KEYWORDS    RefSeq.
SOURCE      Zhihengliuella halotolerans
  ORGANISM  Zhihengliuella halotolerans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Zhihengliuella.
REFERENCE   1  (residues 1 to 792)
  AUTHORS   Thompson,D., Pepys,M.B. and Wood,S.P.
  TITLE     The physiological structure of human C-reactive protein and its
            complex with phosphocholine
  JOURNAL   Structure 7 (2), 169-177 (1999)
   PUBMED   10368284
REFERENCE   2  (residues 1 to 792)
  AUTHORS   Beckmann,G., Hanke,J., Bork,P. and Reich,J.G.
  TITLE     Merging extracellular domains: fold prediction for laminin G-like
            and amino-terminal thrombospondin-like modules based on homology to
            pentraxins
  JOURNAL   J Mol Biol 275 (5), 725-730 (1998)
   PUBMED   9480764
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024777.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13385.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Zhihengliuella halotolerans"
                     /db_xref="taxon:370736"
     Protein         1..792
                     /product="LamG-like jellyroll fold domain-containing
                     protein"
                     /calculated_mol_wt=84221
     Region          44..372
                     /region_name="GH43_62_32_68_117_130"
                     /note="Glycosyl hydrolase families: GH43, GH62, GH32,
                     GH68, GH117, CH130; cl14647"
                     /db_xref="CDD:449341"
     Region          381..484
                     /region_name="GH43_C"
                     /note="C-terminal lipocalin-like domain; pfam16369"
                     /db_xref="CDD:465108"
     Region          496..582
                     /region_name="aBig_2"
                     /note="Atrophied bacterial Ig domain; pfam20578"
                     /db_xref="CDD:466727"
     Region          635..777
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
ORIGIN      
        1 mrqrmhlsaa avaalslalv apaataappq paplpmpeft dvevhdpshv eadgehwvfg
       61 shlaaasted fmtweqeanh vtaenplfdd vtvelaetfa waesdtlwap dviqladgry
      121 ymyynacrgd sprsamgvav senvggpyrd lgiilrsghr dgegmsadgt pydgrihpna
      181 vdpdvyfdhe gdlwmtygsy sggifsleld petgmplpdq gygthltggn hsriegasim
      241 pdaesgdyfm flsfggldad ggynmrvara edpagpyyda egndmrevrs drdlpifdda
      301 siepygtmlm ggylfqrevg dpgsglgdgy vspghnttyv dpetgemlli fhsrfpgqge
      361 rhnvranrmh fnsagwpvva pyryagagle hvrrgdavgr yrlidhgkai tadvaraedi
      421 rlnqngtvsg avtgrwqvyn kdrakltldg evydgrfsre wdptaqawvq afsvqsaagv
      481 slwgsalapm sdaeivaavs adlaggdylg dtsavvadlq lptegthgsn iawessdpsv
      541 vtaegavtrp apgddvgaat ltatvasggl tervefdvtv latieqglaa hysfdgslqe
      601 aesrtaegtv tghridttgg qlsytggvdg qaavldgasg irlpdgvlsg keysvslwlk
      661 peqftpytta ffgardennw islvpqghsg vggntllwsg attyydgdag sripagqwsh
      721 vaftvdhgdv avyldgelvh tgsgfpdvlt tadgvfgvgv nwwdtpfaga vddlrlytga
      781 ldaadvaala kr
//
LOCUS       WP_257998198             345 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase [Zhihengliuella halotolerans].
ACCESSION   WP_257998198
VERSION     WP_257998198.1
KEYWORDS    RefSeq.
SOURCE      Zhihengliuella halotolerans
  ORGANISM  Zhihengliuella halotolerans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Zhihengliuella.
REFERENCE   1  (residues 1 to 345)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 345)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Zhihengliuella halotolerans"
                     /db_xref="taxon:370736"
     Protein         1..345
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=37485
     Region          28..330
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     Site            order(44..46,74,79,110,151,181..182,206,234..240,287,
                     304..307,312,315..316)
                     /site_type="active"
                     /db_xref="CDD:381296"
     Site            order(74,79,110,151)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381296"
ORIGIN      
        1 mtehridrth ethrpyvaae drydsiayrs vgrsglvlpp lslglwwnfg dnrpfdtqrq
       61 ilrhafdhgi thfdlannyg ppygsaeenf grmmakdfap yrdelivssk agydmwpgpy
      121 gnggsrkyll ssaeaslkrl gldyvdifys hrptpdvple etigaldtlv rqgkalyvgi
      181 ssyspertae aaeiarslgt plvihqpsys llnrwvedgl latlaregmg siaftplaqg
      241 lltnkylena datpsggrss lsglteenla ivrnldrhaa ergqslaqms iawllrsggv
      301 tsvligasst gqlddnlgal vntsftdael llidritagd pgsga
//
LOCUS       WP_257998233              85 aa            linear   BCT 02-MAR-2025
DEFINITION  PLDc N-terminal domain-containing protein [Zhihengliuella
            halotolerans].
ACCESSION   WP_257998233
VERSION     WP_257998233.1
KEYWORDS    RefSeq.
SOURCE      Zhihengliuella halotolerans
  ORGANISM  Zhihengliuella halotolerans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Zhihengliuella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024788.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13396.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Zhihengliuella halotolerans"
                     /db_xref="taxon:370736"
     Protein         1..85
                     /product="PLDc N-terminal domain-containing protein"
                     /calculated_mol_wt=9468
ORIGIN      
        1 mdrdatneem epmagkkkws elnrrgkwrv lvlgtaqlal qfvvlkdlse rhesevrgpk
       61 sawvagsfvn figplaylva grvkk
//
LOCUS       WP_257998203             321 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Zhihengliuella halotolerans].
ACCESSION   WP_257998203
VERSION     WP_257998203.1
KEYWORDS    RefSeq.
SOURCE      Zhihengliuella halotolerans
  ORGANISM  Zhihengliuella halotolerans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Zhihengliuella.
REFERENCE   1  (residues 1 to 321)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Zhihengliuella halotolerans"
                     /db_xref="taxon:370736"
     Protein         1..321
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=35690
     Region          4..301
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 mketprehgm lptadgqriy weewgeesga palylhggpg gtcgrsgyrn rfdlsrtrvi
       61 gfdqrgcgrs lphasdpats ldsnttahli rdietlrear gveswvvngv swgstlalay
      121 aqahpdrvag vvlfavttts rrevdwiteg vgavfpeawd rfathaerag tgyrrgrdrl
      181 veaydrllns pdpavrdaas rewarwedvh vsigaggfar dprwdddayr lafarlvahy
      241 wsndgfadpp llermdrlrd ipgilihgrr dvsgptltav evhrrwpgst liideqdghg
      301 gptmvqhwse anarllrlhe a
//
LOCUS       WP_257998355             333 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Zhihengliuella
            halotolerans].
ACCESSION   WP_257998355
VERSION     WP_257998355.1
KEYWORDS    RefSeq.
SOURCE      Zhihengliuella halotolerans
  ORGANISM  Zhihengliuella halotolerans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Zhihengliuella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Zhihengliuella halotolerans"
                     /db_xref="taxon:370736"
     Protein         1..>333
                     /product="ABC transporter substrate-binding protein"
     Region          40..>320
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mnhrlrtgal aagvlalalp lagcfsaesa estghgqdar islammqppr sglnpmsdda
       61 fklsrwatae tlvalddasd pvpslatewe qtdeltwrfa iregvtfhdg teltaeaaan
      121 slrvatestp lprildgvdl gvdvdgdhvv lttgspdpll pnrlsspqls ilsenaydgd
      181 titpvgtgtg pfelisvdgt ssatldrydg ywgtpaaaag idadfvpdgt araaalrtgt
      241 ahvvetvpag qaasideell hevpmprtnt lylnsesgpf adpavraaar eaidraaiia
      301 sayegradea vgllgpalpw tleerggeey dei
//
LOCUS       WP_257998379             287 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Zhihengliuella
            halotolerans].
ACCESSION   WP_257998379
VERSION     WP_257998379.1
KEYWORDS    RefSeq.
SOURCE      Zhihengliuella halotolerans
  ORGANISM  Zhihengliuella halotolerans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Zhihengliuella.
REFERENCE   1  (residues 1 to 287)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 287)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Zhihengliuella halotolerans"
                     /db_xref="taxon:370736"
     Protein         1..287
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=30711
     Region          15..277
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(21,23..24,26,45..47,93..95,146..147,149,168,172,
                     198..201)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(115,149,168,172)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 msrrapkpaa gaelktvvlt gasdgvgaaa akqlaaqghh vvvvgrsper taavaarida
       61 pfyladfael gqvrrlaael saahpridvl vnnaggimgq reltmdghek tfqvnhlapf
      121 lltnlllpvl tasnatvvqt ssraarvfar fdiddlqnad nyrpqtaygn aklanilftr
      181 elqqrhgdag isavsfhpgi vgtsfaadtt hfmrrvyhgp lkrlltitpe qaaedlvwla
      241 tgapgqtfep geyyesrqlp grinpdsvdp vlaaqlwdrs aqlvhas
//
LOCUS       WP_257998406            1105 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 9 protein [Zhihengliuella halotolerans].
ACCESSION   WP_257998406
VERSION     WP_257998406.1
KEYWORDS    RefSeq.
SOURCE      Zhihengliuella halotolerans
  ORGANISM  Zhihengliuella halotolerans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Zhihengliuella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012961.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00759.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1105
                     /organism="Zhihengliuella halotolerans"
                     /db_xref="taxon:370736"
     Protein         1..1105
                     /product="glycoside hydrolase family 9 protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=118139
     Region          19..120
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; pfam02018"
                     /db_xref="CDD:396553"
     Region          174..289
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; pfam02018"
                     /db_xref="CDD:396553"
     Region          334..414
                     /region_name="CelD_N"
                     /note="Cellulase N-terminal ig-like domain; pfam02927"
                     /db_xref="CDD:427058"
     Region          426..922
                     /region_name="Glyco_hydro_9"
                     /note="Glycosyl hydrolase family 9; pfam00759"
                     /db_xref="CDD:459928"
     Region          941..1025
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          957..961
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          970..973
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          990..994
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1004..1009
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
ORIGIN      
        1 masvpsahaq pldavgvvhd fsdgdaagwh ayanagtvsa stdtsefcta vtggenawdv
       61 aaqldgvtfd reatyvvsfd ahasapvtvp lqggagypav faqsvaldgt pepqhveftf
      121 apeewatata npdspledsw tettgdisfq lggqdepytl cfdnfslqqk aspeqvvggd
      181 fedgelapfy asgagvsarv edgvmcarle ggttnrwdqi igfngivlep gvtyglsfda
      241 sssngrpvrv vigddappht vlfeqsptls demesysytf tpesgftasa gedlgsgels
      301 fqvggasesw tfcldnvsfi sgvdpgvytp etgprvrvnq vgylpegpkq atlvtdatsp
      361 vdwelvnaeg atvtsgetsp agvdetagln vhevdfgtfe qpgkytllad deqsyefaia
      421 pglydqlryd ainyfypars giaidgsvmv gqpdaeqytr eaghvgspgd gsvnqgdrdv
      481 pcltpatege ywmygdwecn ytadvvggwy dagdhgkyvv nggisvaqll styertlytp
      541 tgadadlgdg tlniprdess ngvpdvldea rwqlewmmkm qvpaeadmyp gmvhhkvada
      601 nwtglplmpa ddpqerylhr pstaatlnfa avaaqgarlw ekydptfaae llaagnvawd
      661 aahetpelya papndnpsag sgpydddnvq defywaaaem flttgdpefr dyvvaseynt
      721 sdiwtaggfn wfetaalgri nlaivesdip grseirqsvi daaerylawq ekqpfgtayp
      781 gadgqydwgs nsailnnqvv mgtafdltgd qrfadgvles mdyllgrnal nnsyitgygh
      841 hysknqhsrw fanslepslp npprgsvsgg pnsmtetwdp vikslydder pcapqfcyvd
      901 diqswstnei tvnwnsaltw vasfaadqaa gdessagriv rvdehpadas vvegesvqfa
      961 asatgapaps vqwqqqvdgt wqdvpgeesa tlkltaarad dgrsyrayfa npfggfytda
     1021 avlavrnkpd vatppssapa tppaepedrp adgstqaped gsagdselae tglgeywmvl
     1081 vilaslalla gvlllalrar rtsqe
//
LOCUS       WP_257998437             283 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-binding protein [Zhihengliuella halotolerans].
ACCESSION   WP_257998437
VERSION     WP_257998437.1
KEYWORDS    RefSeq.
SOURCE      Zhihengliuella halotolerans
  ORGANISM  Zhihengliuella halotolerans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Zhihengliuella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13460.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Zhihengliuella halotolerans"
                     /db_xref="taxon:370736"
     Protein         1..283
                     /product="NAD(P)H-binding protein"
                     /calculated_mol_wt=29529
     Region          16..268
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(20,22..23,25,44..46,73..75,105..107,118,120,
                     139..142)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187578"
     Site            order(81,107,118,120)
                     /site_type="active"
                     /db_xref="CDD:187578"
ORIGIN      
        1 mtgtvteenq tgvlmilvtg asgqlasriv thlralgada vggsrspgeh draldfdvpa
       61 tldltgvdtl vlvsagyaed dvvvhrhstv leaarrdgvg hvvytslvga gdhlafalah
      121 raterllrns gmrwtilrng lyaelvgall sweeahlvsp fgagsiaapt rddlalaaal
      181 vaadppghvs rvheltgppf avldianela apvqelslde yrrglldtpg mqpfqppmlt
      241 siassirhnm ladhhsdlat vlgrqpesgl ptaaasaapt rpa
//
LOCUS       WP_257998498             446 aa            linear   BCT 02-MAR-2025
DEFINITION  SMODS domain-containing nucleotidyltransferase [Xanthomonas
            arboricola].
ACCESSION   WP_257998498
VERSION     WP_257998498.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 446)
  AUTHORS   Burroughs,A.M., Zhang,D., Schaffer,D.E., Iyer,L.M. and Aravind,L.
  TITLE     Comparative genomic analyses reveal a vast, novel network of
            nucleotide-centric systems in biological conflicts, immunity and
            signaling
  JOURNAL   Nucleic Acids Res 43 (22), 10633-10654 (2015)
   PUBMED   26590262
REFERENCE   2  (residues 1 to 446)
  AUTHORS   Davies,B.W., Bogard,R.W., Young,T.S. and Mekalanos,J.J.
  TITLE     Coordinated regulation of accessory genetic elements produces
            cyclic di-nucleotides for V. cholerae virulence
  JOURNAL   Cell 149 (2), 358-370 (2012)
   PUBMED   22500802
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037736.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18144.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..446
                     /product="SMODS domain-containing nucleotidyltransferase"
                     /calculated_mol_wt=51530
     Region          13..177
                     /region_name="SMODS"
                     /note="Second Messenger Oligonucleotide or Dinucleotide
                     Synthetase domain; pfam18144"
                     /db_xref="CDD:436305"
     Region          311..438
                     /region_name="AGS_C"
                     /note="Adenylyl/Guanylyl and SMODS C-terminal sensor
                     domain; pfam18134"
                     /db_xref="CDD:436297"
ORIGIN      
        1 melkkklegl wemsvsemfa dfltnlkvsn aetislryge ltaalnkhfr dteskeantl
       61 qvgsfgrktg idgisdldml yivpqakwde ydkkkgqlkl lqdtrdailk rypktrvrvd
      121 rlvvtvtysn fhvevqpvfa lddgsykypd tksdgswkit kprqemtava kmdedkncnl
      181 rrlckmaraw knkhgvamgg llidtlaynf leatktydsk sylyydelsr dffkfladep
      241 dqdtywapgs rqhvkvkkrf qrkakkayef clkaieadge dgvhekwkkv fgrpfpsgtk
      301 aavedvaftw dnteefiedr favditksli ldcdvkqngf rkfylsdlik rkmplkankv
      361 lrfwikelnv dgpyeiywkv lnrgveaekr niirgqilpd ggyrqkqets dfrgdhvvec
      421 ycvingvvva kdrihvsids dtgdyd
//
LOCUS       WP_257998521             649 aa            linear   BCT 02-MAR-2025
DEFINITION  SpoIIE family protein phosphatase [Xanthomonas arboricola].
ACCESSION   WP_257998521
VERSION     WP_257998521.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 649)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..649
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=70528
     Region          43..192
                     /region_name="PDC1_MCP_like"
                     /note="first PDC (PhoQ/DcuS/CitA) domain of
                     methyl-accepting chemotaxis proteins and similar domains;
                     cd12913"
                     /db_xref="CDD:350338"
     Region          195..629
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
ORIGIN      
        1 mrvllaatav lvvllallgt vfylgarael veaartevdg lteqtarsla amldsvqvsg
       61 rtlaasssav glqpfnlral llatlsgdpd igaarliiep rtqkardtgf vwyvhrdgtr
      121 vleksvqdlg ydyrampwyl rtqregraww sepylnangg nalytsynlp lrrpgdavda
      181 apvgmvsvdl plqhlreiid qlprdigiqp mllspegmlv fspdpalnlr ytleryvahs
      241 rpdlaplqra vaagqpisfa htapdgerfl thsaavgrsg wtfvlsaseg yvlaglnwla
      301 awvalaallg avvwwwlmgr itrkltrpie eltdtaehfr rgefayplqh ierrdevgvm
      361 arafdsarga irdhiaqige mtaarermhs elqiareiqq amlpsgrtfd rasshletca
      421 wlepakavgg dfyhfvetep gllwfvvgdv sdkgvpaalf maravsvlei aarrhtrpds
      481 iliaastrla enndtcmfat vlcgvinlvs gdywlasagh eppvlididg sarplpldtg
      541 aplgiepqva ypvlqgrmsa gqtllgytdg vteamdeqga syglerllga lrprrsaaaq
      601 ckavianiah ftgqadpydd itllairlrq ehagrvadag rdapgkatt
//
LOCUS       WP_257998537             762 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase domain-containing protein [Xanthomonas
            arboricola].
ACCESSION   WP_257998537
VERSION     WP_257998537.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025033.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13649.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..762
                     /product="methyltransferase domain-containing protein"
                     /calculated_mol_wt=85668
     Region          46..150
                     /region_name="UbiG"
                     /note="2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,
                     4-benzoquinol methylase [Coenzyme transport and
                     metabolism]; COG2227"
                     /db_xref="CDD:441829"
     Region          283..>384
                     /region_name="Bud32"
                     /note="tRNA A-37 threonylcarbamoyl transferase component
                     Bud32 [Translation, ribosomal structure and biogenesis];
                     COG3642"
                     /db_xref="CDD:442859"
     Region          <459..>689
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
ORIGIN      
        1 mteimhigar vaalpekyqp ifghpelseg ssrgcedrfv lirecaqrlq gelgrplrvl
       61 dlgcaqgffs lslaaeghqv hgvdfldlnv dvcqalaqeh ptfaasfehg tvedviarld
      121 pdqydlvlgl svfhhlvhsq giarvaglcr klsevtdagi felalreepl ywgpslphdp
      181 aelltdyaft rllsrqathl ssisrplyfa sskfwyvgea vgrfsswsge ahaygrgthq
      241 ysrryyfgdk vfvkkmtmgi ggraeinwqe fnneveflrn ppasypvprl iaalddasdl
      301 flvremsggr llseliddgs pydpdkvvse lleqlvmler aglyhndvrc wnvlmsqegk
      361 ailidygais aeatdcswlg dlllsflitv keilqrrivp aipgrepald fmtlppryrn
      421 afiqafggdq arwtfaelqe clarsepval hapewtslys hmqqallsyn trlgalytqs
      481 ehdrvelaar aslierlqvg aqqaqdklat lqleaetadn ryrdlekvss elqewakdle
      541 rrtaeaedre kqlnrgladr eaenarlvsq isvleselee rqrvrelsel laadlsrlve
      601 erdgmqvsms emervntqqq stidelqaki vslvqrvnrs etagaadarr vkelqldlsh
      661 rlqaledars rirelelavd mlegqigelh tsrswrvtap lrwvtmkvtk rggplvvhap
      721 qrlertepvl aedevatpad vaidkqlaal dqlgsrirks kk
//
LOCUS       WP_257998572             662 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Xanthomonas arboricola].
ACCESSION   WP_257998572
VERSION     WP_257998572.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14559.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..662
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=74513
     Region          <17..658
                     /region_name="PGA_TPR_OMP"
                     /note="poly-beta-1,6 N-acetyl-D-glucosamine export porin
                     PgaA; TIGR03939"
                     /db_xref="CDD:274868"
     Site            order(136..137,139,162,165..166,171..172,174..175,198,
                     201..202,205..206,209)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          160..192
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          197..222
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mtdastaltp mqqaeqlrgq qrhadalaiy ervlranprd rgayamrait lsdlgsaqla
       61 aeavwrhpdw fsqqererie ndrvarmigw asaepidtah ryaetdqalv nvarieresp
      121 ptltweatrl rvdslvalnq rqrhrdvvan yqalkaegie vpayvlptvg dslmglrrpa
      181 eaeavlrqal qhnpddfntq lllgyalleq erfdlamplf eklaatqapw prrngassgy
      241 enwdrfsadi alatarsaan hnrdadallr ervaigpdna elqaalasie frrghpsaal
      301 qrnamaltld phqkqarsgv veaqrdldrl dlaaatfapl rmeypddagl qrlgaslerq
      361 rgwqvhlsha rgrsdndtlt nstsplgndf gstlleaesp llgerwrvgl rarddwadfq
      421 dtrvryrsfw lgthyrydrl dvsayggral defdrdgtaw aldagwrfsd awygslawrt
      481 rdpdaslqar rfgitgdsig aalrwipnde srwelqarql rysdgnrrdq ldlsgsqrvw
      541 asphvlldgl faasagraed dravnyfnpr rnsavaagvr idqigwrryd yafrqrlevt
      601 vgptyqsgfg sqwvpsaayr hlwslgdgsa lsygvswsrp vydgqreqql gfdldfrwgg
      661 tp
//
LOCUS       WP_257998640            1947 aa            linear   BCT 02-MAR-2025
DEFINITION  putative Ig domain-containing protein [Xanthomonas arboricola].
ACCESSION   WP_257998640
VERSION     WP_257998640.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 1947)
  AUTHORS   Bentley,S.D., Maiwald,M., Murphy,L.D., Pallen,M.J., Yeats,C.A.,
            Dover,L.G., Norbertczak,H.T., Besra,G.S., Quail,M.A., Harris,D.E.,
            von Herbay,A., Goble,A., Rutter,S., Squares,R., Squares,S.,
            Barrell,B.G., Parkhill,J. and Relman,D.A.
  TITLE     Sequencing and analysis of the genome of the Whipple's disease
            bacterium Tropheryma whipplei
  JOURNAL   Lancet 361 (9358), 637-644 (2003)
   PUBMED   12606174
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017183.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05345.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1947
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..1947
                     /product="putative Ig domain-containing protein"
                     /calculated_mol_wt=192698
     Region          36..1571
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          1675..1925
                     /region_name="Autotransporter"
                     /note="Autotransporter beta-domain; pfam03797"
                     /db_xref="CDD:461054"
ORIGIN      
        1 mstnltasgg vrwmlallll atshvalaay cptpksatvn sggsvsfevg dcdgpsnigm
       61 tdpgvppahg tyslpgqnpd steqvtytnn gdgatsdsfy lldednnqvv fnitvnpsrt
      121 asiavspasr nedsgasfty tvtlsqtsss attvnlsrsg tatsgtdytg apnsvvvpan
      181 attatfsvtp iadttveade tvvisvasgs gyaigspssa tativnddfp tasitvspss
      241 vpedgaanli ytvsldqaaq savsvafsvg gsatsgtdya avsspltipa gqtsgtiiin
      301 ptadttiepd etvvislaag sgysvgspns atgtianddq pslsindvsv negnagttna
      361 tftvslsqpa gaggvsfdia tadgtatagv dyvassltgq tipagsssat ftvlvngdtl
      421 sepnetffvn vsnvtgatva daqglgtivn ddavpslsid dvsvnegnsg tttatftvsl
      481 saasgqtvsv nyatangsat agsdyvarsg tltftpgtta qgvaitvngd taiepnetfs
      541 vglsgasnas iaratgtgti lnddvvvtvg paslpaatag saysqnlsas ggtapytfav
      601 tagalpagls lsatgvlsgt ptatgsfnft atatdsggsp tsgnraytlt vagatvtlpa
      661 tslpagtagq ayssaltpas ggiapytyav tagalpagit lngssgaltg tpgnvgsfaf
      721 nvtatdstsg tpsqatqsys lniaappivv apstlpaatr gtaysqalsa sggtapytyt
      781 lasgtlpagl tlasngtlsg tatvegsfnf tvtatdagsf tgdqaysltv agpnlvlpas
      841 slpagtagqa ysaaitpatg gtapysyalt ggvlpagvvv daatgtlsgt ptvagtfnft
      901 ltvsdstpsp aaqasrsytl tiaapvvvia pttlpaatrg taysqtlsas ggtapytyav
      961 sagslpagit lasngtlsgt atvegsfnvt vtaidantft atqayaltva gpnlalpast
     1021 lpagtagqay saaitpatgg tapytyaltg gvlpagmvvd aatgalsgtp tvagtfnftl
     1081 tvsdstpspa aqasrsytlt iaapvvviap ttlpaatrgt aysqtlsvsg gtapytyavs
     1141 agslpagitl asngtlsgta tvegsfnvtv tatdantfta tqayaltvag pnlalpastl
     1201 pagtagqays aaitpatggt apyryaltag alpngvivda atgrlsgtpt lsgtfnftlt
     1261 atdstpspav qasqnysvti aaatlvlaqp tlppavrgsa ynqvltasgg vapyrysias
     1321 gtlpagltla ndgtlsgtpt tqgtssftia vadagnasat qaysftvsda apvavadvaa
     1381 tmsdaavtva vtandtgnit aiaiaaaptn gtavvnglel vytpaagfvg tdvvsytvtg
     1441 sggtsaaatv tiavnarpva vsvtaaavpg eaqqvdltrn atggpfvaaa vvavlpasag
     1501 tatitqvggl ataaaarasg pspaaaamae tptfmltftp npafvgqatv qftlsnafat
     1561 svpasvvfti aprrdpsvda evrglidaqs estrrfaraq idnfqrrlea thrggstfsn
     1621 avsfqptshc rqadrgisaq pcspdtqead ndfrdapava ssgtstaqgq gdlglwvgga
     1681 irsgsldkqs nsngvdfqtd glsvgadyrv aqslaigagl gwgrddsdvg rngshskata
     1741 ytmalyasfh pgkafffdtl vgyqllsydl rryvtddasm aegnrdgkqw iaslstgadl
     1801 qrgelqitpy arvdvaratl dgyvedgvap falryddmdv atttgnlglr lewrrevawg
     1861 rltpqlrvey qrdfqgrgda tlsyadlngg pfyragqsaf drnrlmvgig aallteqgls
     1921 trleyrgitd gdsnndqtwm inlekky
//
LOCUS       WP_257998727             160 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Xanthomonas arboricola].
ACCESSION   WP_257998727
VERSION     WP_257998727.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14559.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..160
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=16795
     Region          <7..>134
                     /region_name="PEP_TPR_lipo"
                     /note="putative PEP-CTERM system TPR-repeat lipoprotein;
                     TIGR02917"
                     /db_xref="CDD:274350"
     Region          22..49
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276808"
ORIGIN      
        1 mdvampsvdk lsaywakdpa npelacqlcd alietgqsar aedviaalpa dtaslagvqf
       61 raarldllag ryveaearlq plaerhaapa ldhdiafaql cqqnldgsaa tlqkararhg
      121 dnaefavlsa rialmrsdya aadkalaaal aftptsprpe
//
LOCUS       WP_257998665             358 aa            linear   BCT 02-MAR-2025
DEFINITION  XVIPCD domain-containing protein [Xanthomonas arboricola].
ACCESSION   WP_257998665
VERSION     WP_257998665.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 358)
  AUTHORS   Oka,G.U., Souza,D.P., Cenens,W., Matsuyama,B.Y., Cardoso,M.V.C.,
            Oliveira,L.C., da Silva Lima,F., Cuccovia,I.M., Guzzo,C.R.,
            Salinas,R.K. and Farah,C.S.
  TITLE     Structural basis for effector recognition by an antibacterial type
            IV secretion system
  JOURNAL   Proc Natl Acad Sci U S A 119 (1) (2022)
   PUBMED   34983846
REFERENCE   2  (residues 1 to 358)
  AUTHORS   Souza,D.P., Oka,G.U., Alvarez-Martinez,C.E., Bisson-Filho,A.W.,
            Dunger,G., Hobeika,L., Cavalcante,N.S., Alegria,M.C., Barbosa,L.R.,
            Salinas,R.K., Guzzo,C.R. and Farah,C.S.
  TITLE     Bacterial killing via a type IV secretion system
  JOURNAL   Nat Commun 6, 6453 (2015)
   PUBMED   25743609
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 358)
  AUTHORS   Alegria,M.C., Souza,D.P., Andrade,M.O., Docena,C., Khater,L.,
            Ramos,C.H., da Silva,A.C. and Farah,C.S.
  TITLE     Identification of new protein-protein interactions involving the
            products of the chromosome- and plasmid-encoded type IV secretion
            loci of the phytopathogen Xanthomonas axonopodis pv. citri
  JOURNAL   J Bacteriol 187 (7), 2315-2325 (2005)
   PUBMED   15774874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042736.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20410.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..358
                     /product="XVIPCD domain-containing protein"
                     /calculated_mol_wt=39249
     Region          88..162
                     /region_name="PoNe"
                     /note="Polymorphic Nuclease effector (PoNe) domain is a
                     deoxyribonuclease; cl41756"
                     /db_xref="CDD:425387"
     Region          236..330
                     /region_name="DUF6696"
                     /note="Domain of unknown function (DUF6696); pfam20410"
                     /db_xref="CDD:466559"
ORIGIN      
        1 mgrlfaplrp agargacrlt ehlkrqnrgc srcpnvegll rsgelaprel taiikrnpdv
       61 fdgridfpta ldhstqgvdl trlttrqlgd igeaiqthel vkqgysdiva iknrsghgid
      121 lvgrnpggel effeiktsak gmapaqhgdp eqfvakrler aidakghwnp qntipglndi
      181 adgikreigp eaqninakwv qlnlsrtpds prlqiertvd swvkpapqht lltpgeaghp
      241 dhaafdtmlr tvqgdgrwnv aesrniaasl lqeyktdplc ktldsvrigg stetprifav
      301 ssphgdrgpd fhvhvqaeqa aqrpaaesfa qvqqinqqqa lpqeteqqnl ahrgprms
//
LOCUS       WP_257998733             377 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6094 domain-containing protein [Xanthomonas arboricola].
ACCESSION   WP_257998733
VERSION     WP_257998733.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039653.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19587.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..377
                     /product="DUF6094 domain-containing protein"
                     /calculated_mol_wt=41985
     Region          <1..210
                     /region_name="DUF6094"
                     /note="Uncharacterized methyltransferase family (DUF6094);
                     pfam19587"
                     /db_xref="CDD:437419"
ORIGIN      
        1 mpanqeisma hmfprlarnf vktgyfptde ptleralnal mpsdgpmcil dpcagegvai
       61 aeaahalgre qanafavefd aerahhargl vdhclhadlm dtmiskqsfg llwlnppygd
      121 lskdvngnig yqgqgrarle klfyqrtlsl vqyggvlvfi vpsyvldael vgwltrhytd
      181 lriyravetq fkqvvifgrr mrqreqapdg vkamrnlllq vglgeveaee lpsewpflpy
      241 ivpaspaepe hffrvtmepe qfadevgrlq glwpsldthl gaaqqllrpp aralshwhla
      301 lalaagaisg vvrsktgrll vvkgdthkek tlqrefterd dgciaetril tdkfvpvira
      361 wdmtpgsptr gevltir
//
LOCUS       WP_257998745             240 aa            linear   BCT 02-MAR-2025
DEFINITION  AbiH family protein, partial [Listeria monocytogenes].
ACCESSION   WP_257998745
VERSION     WP_257998745.1
KEYWORDS    RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (residues 1 to 240)
  AUTHORS   Prevots,F., Daloyau,M., Bonin,O., Dumont,X. and Tolou,S.
  TITLE     Cloning and sequencing of the novel abortive infection gene abiH of
            Lactococcus lactis ssp. lactis biovar. diacetylactis S94
  JOURNAL   FEMS Microbiol Lett 142 (2-3), 295-299 (1996)
   PUBMED   8810513
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025612.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14253.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Listeria monocytogenes"
                     /db_xref="taxon:1639"
     Protein         1..>240
                     /product="AbiH family protein"
ORIGIN      
        1 mervlnklgg ylsdpiniil nncgfgenle deqendlynl meerleekdk yvlsvafihk
       61 lnsysncsle eflmlelnky ekyfsdyikt evtnkyeeyh ktrnniltkl sgglgathsi
      121 svmnfnftpn qfsdsvklne kiglahvnvh gsylansifg idtksledid tigsgyrftk
      181 tyrkltlktk rsteilyhdi tdiifyghsl gqadyayfqs ifdyldiynn tivltfyysd
//
LOCUS       WP_257998800             686 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5686 family protein [Hoylesella buccalis].
ACCESSION   WP_257998800
VERSION     WP_257998800.1
KEYWORDS    RefSeq.
SOURCE      Hoylesella buccalis (Prevotella buccalis)
  ORGANISM  Hoylesella buccalis
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Prevotellaceae; Hoylesella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039501.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18939.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Hoylesella buccalis"
                     /db_xref="taxon:28127"
     Protein         1..686
                     /product="DUF5686 family protein"
                     /calculated_mol_wt=79982
     Region          55..653
                     /region_name="DUF5686"
                     /note="Family of unknown function (DUF5686); pfam18939"
                     /db_xref="CDD:465922"
ORIGIN      
        1 mrtallkvvm lilpslalpq evwsakskld tllhrvfsyp qnieirrvad ttsyayikss
       61 lrvnkrnvfl mavptlyava hggrreyvqe sfnevsllps gdfttkklls lstiprrhva
      121 mptlmsyltp niydvtmige nilspfnkqn kiyykysleq esdsvirlrf kpklkntllv
      181 ngvaivtphd griiqvrlag eydmiqfrlf ikmgsgimqa irpekcnlda rflflgndik
      241 ahytmaynlp kpvddhmedd hdmnkmkqlr pepltsyekl iygrivkare aaekdttkld
      301 tlptfsrrmk lktilwdmig envlthinqk fgpdqqgyfr inpilnplfm gysnnqgfyy
      361 kfnirggykf tnnsdiwlqf kagysfklkq fyfwtpliyy fdkqhnaylk ttlsggrrik
      421 nrrlvnelnl atdnnpiweg mqldefkdty wdcfanydls khigfqagli lhhrsavhke
      481 gfalinkprv ysslapklqv lyrpwgyagp tltasyeqsl nklantnvpy trwefdgqyi
      541 lplwnvqsls mrlgggfyth rsnndyfvdf enfrqtflpd gwiddwsgef elldsdlyns
      601 shyyaranft yespflilaw vpfaghfier erlyfsalha kqahpyielg yafktrlasv
      661 gafvstingk yrnfgfkfgf elfrqw
//
LOCUS       WP_257998815             378 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6057 family protein [Hoylesella buccalis].
ACCESSION   WP_257998815
VERSION     WP_257998815.1
KEYWORDS    RefSeq.
SOURCE      Hoylesella buccalis (Prevotella buccalis)
  ORGANISM  Hoylesella buccalis
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Prevotellaceae; Hoylesella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039640.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19529.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Hoylesella buccalis"
                     /db_xref="taxon:28127"
     Protein         1..378
                     /product="DUF6057 family protein"
                     /calculated_mol_wt=43779
     Region          <238..374
                     /region_name="DUF6057"
                     /note="Family of unknown function (DUF6057); pfam19529"
                     /db_xref="CDD:437361"
ORIGIN      
        1 mndtllirmv csilfccftf vylyvyqadv lavaqhilsg grtsyhagvg avlitltlyl
       61 vhlgvsyvcr psgigfsltf fpslllltil tdvsndidrh fslgwwwiaa pllllayggl
      121 mrvlkrnrhq veegkvyevf vhllwqnims lgvmfvlvgl fsnhdvvfhe rakmeqaivn
      181 keykdalevg knnlktdsnl vmlrafclsk thkmgeslfe yplmgesqsl lpngssvrml
      241 mtpdkdvyry igviprqqmp vmrylelite srkakkpagd yllcgylldk nldkfvvhlp
      301 ryyhvdsllp khyrealvly thsrsnpklv yhdavtdady rdyqdlekkn pekmvrqtki
      361 rdiygktywy yfhyhqkk
//
LOCUS       WP_257998837             447 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Hoylesella buccalis].
ACCESSION   WP_257998837
VERSION     WP_257998837.1
KEYWORDS    RefSeq.
SOURCE      Hoylesella buccalis (Prevotella buccalis)
  ORGANISM  Hoylesella buccalis
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Prevotellaceae; Hoylesella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Hoylesella buccalis"
                     /db_xref="taxon:28127"
     Protein         1..447
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=49388
     Region          19..419
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(26..27,30..31,34,65,120..121,123..125,128,144,
                     147..148,151,241,244..245,248..250,253,287,291,349..350,
                     354,358,375,378..379,382..383,386)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:341039"
ORIGIN      
        1 mkekttyphp rktspiawvp tlyfamgmpf vvlnmvtslm ykgmgisdtq itfwtgliml
       61 pwtlkpiwsp fleiyktkkf fvvltqllcg lmfallafal nlsdffaiti gilaviamsg
      121 athdiaadgt ymsvlsteeq arwigwqgaf ynvakifatg glvylagifi ksygvtkawm
      181 fimlivgvtm lalgcyhffi lptdgkpaqh kksarevwte lwavfaeffq kkhityyicf
      241 iilyrfaegf vmkivplflk apvseqglgm teqqiglcyg tvgaaafvig silggyyiah
      301 rglkkslfsl alvfnvpfva ynllaiyqpq dlvfigsaig leyfgygfgf vgltlfmmqq
      361 iapgkhkmsh yafasgimnl gvmlpgmmsg avsdalgyrh ffvfvllcti pallitwfvp
      421 fkaeqttasp ptpptasppa pprkgge
//
LOCUS       WP_257998840             302 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphate acyltransferase [Hoylesella buccalis].
ACCESSION   WP_257998840
VERSION     WP_257998840.1
KEYWORDS    RefSeq.
SOURCE      Hoylesella buccalis (Prevotella buccalis)
  ORGANISM  Hoylesella buccalis
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Prevotellaceae; Hoylesella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013665.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01515.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Hoylesella buccalis"
                     /db_xref="taxon:28127"
     Protein         1..302
                     /product="phosphate acyltransferase"
                     /GO_function="GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=32691
     Region          4..300
                     /region_name="PTA_PTB"
                     /note="Phosphate acetyl/butaryl transferase; cl17212"
                     /db_xref="CDD:450173"
ORIGIN      
        1 mssirnfkdm asqlaqkgvr krtavicatd estqqsvama iqqgwmeaim igctdqvkqs
       61 qplmacsqhl sfieaandqe aaekavamvk egtvdlimkg listdvvira ildkekgilp
      121 agnvlthvta asipdyhkll fftdaavipy ptqeqrymqi kyitqlchqf gisqpkvali
      181 hcsekvnakh fpftagyasl ieqakagafg pcivdgpldl kvacnlhsmq vkridspiqg
      241 sadalvfpdi eagnlfykti tlfahgetac mlqgtqcpvv lpsrgddvms kfnslalacl
      301 hc
//
LOCUS       WP_257998873              85 aa            linear   BCT 02-MAR-2025
DEFINITION  GEVED domain-containing protein [Fischerella thermalis].
ACCESSION   WP_257998873
VERSION     WP_257998873.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 85)
  AUTHORS   Back,C.R., Sztukowska,M.N., Till,M., Lamont,R.J., Jenkinson,H.F.,
            Nobbs,A.H. and Race,P.R.
  TITLE     The Streptococcus gordonii Adhesin CshA Protein Binds Host
            Fibronectin via a Catch-Clamp Mechanism
  JOURNAL   J Biol Chem 292 (5), 1538-1549 (2017)
   PUBMED   27920201
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039776.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20009.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..85
                     /product="GEVED domain-containing protein"
                     /calculated_mol_wt=9131
ORIGIN      
        1 mttfgtgyls gwidlnrdgd fndtgekvis drsitsttvs ttsvpittps tasklipail
       61 ifllvipwvy qtmlqlqlvk pisai
//
LOCUS       WP_257998888             140 aa            linear   BCT 02-MAR-2025
DEFINITION  TetR family transcriptional regulator C-terminal domain-containing
            protein [Fischerella thermalis].
ACCESSION   WP_257998888
VERSION     WP_257998888.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 140)
  AUTHORS   Sullivan,M.J., Curson,A.R., Shearer,N., Todd,J.D., Green,R.T. and
            Johnston,A.W.
  TITLE     Unusual regulation of a leaderless operon involved in the
            catabolism of dimethylsulfoniopropionate in Rhodobacter sphaeroides
  JOURNAL   PLoS One 6 (1), e15972 (2011)
   PUBMED   21249136
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16925.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..140
                     /product="TetR family transcriptional regulator C-terminal
                     domain-containing protein"
                     /calculated_mol_wt=15255
ORIGIN      
        1 maalldrynd yflrlvdgii aqsdsaevkl rrycslfeat lcsgngdkac lygmvgaela
       61 tlkhtlverv tafyrnnear lvqilnqgke sgefsfvgdi qamatlifsl leggflvara
      121 hggasqyrai veqliqlvkg
//
LOCUS       WP_257998928             475 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Fischerella
            thermalis].
ACCESSION   WP_257998928
VERSION     WP_257998928.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 475)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..>475
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          45..469
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation (C) domain of non-ribosomal
                     peptide synthetases(NRPSs) and similar domains including
                     the C-domain of SgcC5, a free-standing NRPS with both
                     ester- and amide- bond forming activity; cd19531"
                     /db_xref="CDD:380454"
ORIGIN      
        1 mrdlyqqiae lspdqralfe krlqqkglss vkisrisqrk dsdslplsfa qqrlwfiqql
       61 dpdnsaynvf salriqgqln vavleqtfte ivrrhetlrt tfttnasgep iqvitppqpv
      121 tlpimdltev snleeevhql ivkeaqqpfd ltkpllrltl vrldaaehvl lltvhhiicd
      181 rwsmgifvre mkalyeafvn skpsplpelp iqypdwaiwq rqwlqgqvle eqlnywqkql
      241 qgnlpvlklp sdrprpvvpt yqgsqqslvl skplsdavkd lskkegvtlf tllltafnil
      301 lckythqddi ivgtdianrn rvetegligf lintlvlrts lsgnpsfrel lhrvrevmqg
      361 ayahqdlpfe klveelnper tlsqmtplfq vkfdlqlaqv eppelsgltv iplafdngta
      421 kfelrfnlsd teqgitglve ystdlfndst itrmvqhfqt llsgivanpe qrlee
//
LOCUS       WP_257998634             304 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6393 family protein [Xanthomonas arboricola].
ACCESSION   WP_257998634
VERSION     WP_257998634.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   Hou,J., Robbel,L. and Marahiel,M.A.
  TITLE     Identification and characterization of the lysobactin biosynthetic
            gene cluster reveals mechanistic insights into an unusual
            termination module architecture
  JOURNAL   Chem Biol 18 (5), 655-664 (2011)
   PUBMED   21609846
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039755.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19930.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..304
                     /product="DUF6393 family protein"
                     /calculated_mol_wt=33573
ORIGIN      
        1 mrehhtyatq latplvgssl ktnasqtrqi vsttslrdav wnseantgls tahvkhqsrq
       61 sgylkrlgla tssnasrsvv aylkrrglqe ylnayiwmwh kmdrlgspdd ptqlfinhrk
      121 lvvrwyrlhg rsvdvpaclg rlrtartfys sdwlyqeiam privlngwaa tlaltglavl
      181 plsscanadt artastqedt mksgaspmle eiyaskkpvr feqvdvssiv akyvplgttk
      241 lvvletfsks ptskivedtp gkvvvrdnkg qamldpdars vvmtfsldad gkvthvdavh
      301 iknq
//
LOCUS       WP_257999068              98 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Xanthomonas arboricola].
ACCESSION   WP_257999068
VERSION     WP_257999068.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 98)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..>98
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>98
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 makakfertk phvnvgtigh vdhgkttlta altkigaerf ggefkaydai daapeekarg
       61 itistahvey espnrhyahv dcpghadyvk nmitgaaq
//
LOCUS       WP_257999145             607 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Fischerella
            thermalis].
ACCESSION   WP_257999145
VERSION     WP_257999145.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 607)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..607
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=68209
     Region          <40..279
                     /region_name="FepA"
                     /note="Outer membrane receptor for ferrienterochelin and
                     colicins [Inorganic ion transport and metabolism];
                     COG4771"
                     /db_xref="CDD:443803"
     Region          323..596
                     /region_name="ABC_6TM_exporters"
                     /note="Six-transmembrane helical domain of the ATP-binding
                     cassette transporters; cl38913"
                     /db_xref="CDD:365789"
     Region          323..346
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:349983"
     Region          361..419
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:349983"
     Region          449..494
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:349983"
     Region          501..538
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:349983"
     Region          562..595
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:349983"
ORIGIN      
        1 msftvgtegs lrdrekkkit teqqiapqil aavektapkd vyrieenqfn ifvqdeirls
       61 dqhtltaglr ietvdhkata gdsstveqsg ttlnpslhyk yqmfpttvfr lsaartvrrp
      121 kfddfvpfre tkngtltqpd vignpklkpe tsigveagie qswgnhtgaf glnafyrwid
      181 dkieneinln pennryeqsp rnvgngkvyg lrldlqtrtp flglpnltlf gnisflgsev
      241 kdkisgeirr freqpayvan lgfdytipew gmnfgltyni lpgfensqlk dgknevtkli
      301 tknpvpslvl dmlrilltyp hwlaaavvst iivaalepsl swmgkkvvdd lkqggtdina
      361 slvnyilvfg gllfglglik fgdklidkiy earliiclqr tylqrrnqer daedishily
      421 hcnrakpgld iihkdswkii sqtisvviwq ltlapkwlpa lliavippil iglifgqfiq
      481 kaslkmltaq eniaasttea kkleliehqe lffphtiqle vfksgteili dlitwfgllv
      541 lvllssvfhi gvvpkevqag dlvlfwgnln llskplgdiv kvynkareay palirvlrps
      601 vyveeet
//
LOCUS       WP_257999181             461 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein, partial [Fischerella
            thermalis].
ACCESSION   WP_257999181
VERSION     WP_257999181.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         <1..>461
                     /product="phosphopantetheine-binding protein"
     Region          <24..>458
                     /region_name="omega_3_PfaA"
                     /note="polyketide-type polyunsaturated fatty acid synthase
                     PfaA; TIGR02813"
                     /db_xref="CDD:274311"
ORIGIN      
        1 ptphtphtph tphlpipefp aphspmqsei pdklvnyqrv lesleyvltq fqqnqsenlq
       61 vhshylshqv eyaktffqlm qqqnsllang khsadaaklk psiiesldrs mmqfhaqqge
      121 tlriheqylk eqveytknff qlvqqeysql inegattqpv istngkigtp eevkiikevt
      181 qvtevkpvke ttqentslss ptpptsatpt vstpsatpap tidlsdldqt llaitsektg
      241 ypiemleldm dmeadlgids ikrveimgal qekypdlpkp snveelaelr tigqivqylq
      301 slvftpasve dkkdkgnnie siftphlpts psptpdlssg vpefsndsta vsesvavaae
      361 piitvtetat staevdlsnl aetllaitse ktgypvemle ldmdmeadlg idsikrveim
      421 galqekypdl pkpsnveela elrtigqive ylqklagaek k
//
LOCUS       WP_257999019             906 aa            linear   BCT 02-MAR-2025
DEFINITION  rhamnan synthesis F family protein [Xanthomonas arboricola].
ACCESSION   WP_257999019
VERSION     WP_257999019.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 906)
  AUTHORS   Shibata,Y., Yamashita,Y., Ozaki,K., Nakano,Y. and Koga,T.
  TITLE     Expression and characterization of streptococcal rgp genes required
            for rhamnan synthesis in Escherichia coli
  JOURNAL   Infect Immun 70 (6), 2891-2898 (2002)
   PUBMED   12010977
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016903.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05045.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..906
                     /product="rhamnan synthesis F family protein"
                     /calculated_mol_wt=100341
     Region          <33..268
                     /region_name="RgpF"
                     /note="Rhamnan synthesis protein F; pfam05045"
                     /db_xref="CDD:428278"
     Region          310..740
                     /region_name="COG5610"
                     /note="Predicted sugar hydrolase, contains GT1 and HAD
                     domains [General function prediction only]"
                     /db_xref="CDD:444341"
ORIGIN      
        1 mvralgiggf lervrlagrk qpvaprlsdq asfgtpvpls qlqlkvgvmv hvfypdlide
       61 faqslqhmpv gydllvsvmd etaaaqarer fsklpqiekl eirvvpnrgr diapllvtfr
      121 eqilaldvvg hlhtkkslyt gseqgewrry lvsslmgspe riawqlgmfq aeprlgmlyp
      181 asyeqvplwa htwlsnfevc rtlaqrlgfd idaseyidfp agsmfwakvd alrslyalnl
      241 eledfpeehg qidgtlhhav erifvavvrh qqyrigimpq dgtlslsgeg grnwqtafet
      301 piatrltlss lqarlvsldi fdtlvvrpfl fpagarayls hliasqfgvg nflelrelae
      361 skaryqrgad vdlsgiyatl aglpdakglp idalqaleva learllrprr gviaaatqlk
      421 qrgirlvals dmyldsallr qvlppevsal paawyvscet gwrkdadnaw kelpaiekid
      481 asrwlhvgdn ehadiqrpqm hklltpvhvl rpsalvevip alrplrpslg aatrwqdqlw
      541 lgllanrfad ladrhpdtlm pspvlspacl gyvvigplif dylawlirta tqrnietilf
      601 lsreghlleq gfqlvrqtsp alqqlhgkyl lasrrgtgtp slhapddlal lldstytgtl
      661 gnlvqarlge aaahilerrl grsvmqrdvy lpemhaelle liapainell alaetertay
      721 lhywratagd gtamvadigy sgtiqanltr ltgqplggay falndratkv paqswaaary
      781 fdgrtecdpe qstilrhdll letlltapsp qfscftasnd vptavyahae lsaaqwatia
      841 qvhegalafi advcqvaqdq sylldfdrts vqiplqcigs grwqapwlad lqlddrftgr
      901 gvvrag
//
LOCUS       WP_257999197             592 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Fischerella thermalis].
ACCESSION   WP_257999197
VERSION     WP_257999197.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 592)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..592
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=65452
     Region          1..189
                     /region_name="OmpR"
                     /note="DNA-binding response regulator, OmpR family,
                     contains REC and winged-helix (wHTH) domain [Signal
                     transduction mechanisms, Transcription]; COG0745"
                     /db_xref="CDD:440508"
     Region          331..>458
                     /region_name="OmpR"
                     /note="DNA-binding response regulator, OmpR family,
                     contains REC and winged-helix (wHTH) domain [Signal
                     transduction mechanisms, Transcription]; COG0745"
                     /db_xref="CDD:440508"
     Region          463..>582
                     /region_name="PleD"
                     /note="Two-component response regulator, PleD family,
                     consists of two REC domains and a diguanylate cyclase
                     (GGDEF) domain [Signal transduction mechanisms,
                     Transcription]; COG3706"
                     /db_xref="CDD:442920"
ORIGIN      
        1 mtldiapdaq talallqtvp ydlivldvml pdadgislcr rirqqqqtip illltakdav
       61 gdrvagleag addyltkpyd saellarira llrrgqtpit etltwgalqv dpqgckvtyq
      121 gnpikltpke yrllelflry phrifdrkal ldhawstdec pgeeavttqi rglrrkleaa
      181 glpndpietl yglgyrlraw qpqthsqepl dagqqeaiaa igqmwqefqg rlqeqlslle
      241 eassnlanqt ltpaqqqqaq yiahrligsl saygqpeaat larhieqgfa apqsaialql
      301 ttllqqlrqa ttqspfanap asstasqppl thrilaiapd ptllqslqte apswgyyldt
      361 atdltsarqq lltqtpdaii ldldfpdtqn tgltfltqik rlgstpvlil tqqdglsnsp
      421 sktlrdritv arlgadaylq kfaspsdiwr vvnrllhrfd pitakllivd ddpdlltrlq
      481 tqlqswgfqv tglsdpsqfw svlqttrpdl llldvsmpey sgidlcrvvr cdahwyalpi
      541 lflsahadad tlhealsvga ddyvlkpite adliqrilkr lgrisaleev pa
//
LOCUS       WP_257999247             276 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Fischerella thermalis].
ACCESSION   WP_257999247
VERSION     WP_257999247.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..276
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=31112
     Region          <9..70
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     Region          <85..186
                     /region_name="GlxA"
                     /note="Transcriptional regulator GlxA, contains an amidase
                     domain and an AraC-type DNA-binding HTH domain
                     [Transcription]; COG4977"
                     /db_xref="CDD:444002"
ORIGIN      
        1 mesiklipdp flkslpgfmh iqvsseptap llktgiqhii qeanciqpgs lclltrlvel
       61 mfieilrnym qnspneqmgg vlalndpivg qvlnwmhadp ahpwtvsela rqvnvsrsal
      121 atrftellgq ppmqyltqwr lqlaahhlrn tdesiakias qvgyeseaaf nrafkryvgk
      181 ppgvwrhhls sehitythas gyihtdqpss ptakvssgry drnaarrldt vrytvllacd
      241 lratwrqqip lrliqrceln fakflsplrg dqeska
//
LOCUS       WP_257999277             323 aa            linear   BCT 02-MAR-2025
DEFINITION  AIR synthase related protein, partial [Fischerella thermalis].
ACCESSION   WP_257999277
VERSION     WP_257999277.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 323)
  AUTHORS   Li,C., Kappock,T.J., Stubbe,J., Weaver,T.M. and Ealick,S.E.
  TITLE     X-ray crystal structure of aminoimidazole ribonucleotide synthetase
            (PurM), from the Escherichia coli purine biosynthetic pathway at
            2.5 A resolution
  JOURNAL   Structure 7 (9), 1155-1166 (1999)
   PUBMED   10508786
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00586.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         <1..323
                     /product="AIR synthase related protein"
     Region          <10..315
                     /region_name="PRK01213"
                     /note="phosphoribosylformylglycinamidine synthase subunit
                     PurL"
                     /db_xref="CDD:234921"
ORIGIN      
        1 alfppaftgg enkavaatvd cnpryvyldp yegakavvae aarnlscvga eplavtdnln
       61 fgspekpigy wqlaeacrgl aegcrelatp vtggnvslyn etldsqgnpq piyptpvvgm
      121 vglipdlski cgqawqvagd viyllglses kitlgaseyl asihgivagk pprvdfdwer
      181 rvqkvcregi rqgwvrsahd caegglvial aeccitgkrg adislklpld dsqrldevlf
      241 gegggrilva vapeqqeiwe sylqenlgqn wqklgkvgns eiglrvlssd gqtlinarie
      301 emgdrylkai errlavytnt qer
//
LOCUS       WP_257999307             511 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1565 domain-containing protein [Fischerella thermalis].
ACCESSION   WP_257999307
VERSION     WP_257999307.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019236.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07602.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..511
                     /product="DUF1565 domain-containing protein"
                     /calculated_mol_wt=53425
     Region          88..352
                     /region_name="DUF1565"
                     /note="Protein of unknown function (DUF1565); cl23857"
                     /db_xref="CDD:305014"
     Region          <413..504
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
ORIGIN      
        1 miyppivskp cqddilpdnk itqkqkshpy levtifliyr sasllfnaag mgvaslmlln
       61 cyfdtaiaqt psqttisqvn alfvnpstgd dkqgnggest pfktitqalr vatpntvikl
      121 akgtystatg eifplilkpg vslqgngssk grgiiisggd dylsrnfgsk nvavvsakga
      181 tltgvtvtns npggyglwie ssnftvtent ftgntqdgvt vigntapiir nnffyrnsan
      241 gitvtdasra eirdnvfqet gfginiaqka qpvvvnnqit nnrsgiivqa ssrpilrknv
      301 iegnredglv vlgqaqpdlg ntseaggnqf rnnarydina saakqiiaay gnviagdriv
      361 gtvntggtia ttensssaai aknstqqtqv tqeitfsaps vstntitstg klppppaavs
      421 sstnnaakpl nsqllplqpa nttskvvvtv tqpkqparpv tsgvvtnspk pkplpsrnaa
      481 gfpspssltp kqtvagwqqq attpqvnygv a
//
LOCUS       WP_257999342             312 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_257999342
VERSION     WP_257999342.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>312
                     /product="DUF6531 domain-containing protein"
     Region          157..218
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
ORIGIN      
        1 mkkphlllil fasllatemc fgediyrwrv tfyssstsrs psescekarq vadrtesswa
       61 fteavpvvsp sgdvfmgycr vtyhyrekps dvrhcdgdcp nwrliregss cplgaeynqq
      121 tgecdcrpgh emddsgcklp dknglekgpp ppegcagnpv nitngnkyqv ehdlsipipl
      181 tryyngldgl wrhsysarit rkgdgfllyr engkaseftg sgkdltsitd lgrlsrlpgk
      241 fsytselnev mefdqngilt klttkegrky rverganlti gdehgnklvl seganhqllr
      301 aqiggisiey ty
//
LOCUS       WP_257999349             504 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent monooxygenase [Priestia megaterium].
ACCESSION   WP_257999349
VERSION     WP_257999349.1
KEYWORDS    RefSeq.
SOURCE      Priestia megaterium (Bacillus megaterium)
  ORGANISM  Priestia megaterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
REFERENCE   1  (residues 1 to 504)
  AUTHORS   Schreuder,H.A., van der Laan,J.M., Swarte,M.B., Kalk,K.H., Hol,W.G.
            and Drenth,J.
  TITLE     Crystal structure of the reduced form of p-hydroxybenzoate
            hydroxylase refined at 2.3 A resolution
  JOURNAL   Proteins 14 (2), 178-190 (1992)
   PUBMED   1409567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01494.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Priestia megaterium"
                     /db_xref="taxon:1404"
     Protein         1..504
                     /product="FAD-dependent monooxygenase"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /calculated_mol_wt=57412
     Region          5..492
                     /region_name="PRK06184"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:235728"
ORIGIN      
        1 mnpqilivga gptglvmayn larhnipfri idksdgpgqa sramailprt lefyqqfgfa
       61 devidrgikm edvyvrvknk ikakvhlgsl geglspfpfv ltfpqddher flleklknlg
      121 ievewktell slaehgeevk tllkaqqeet ayfkyicgcd gahstvrkqm niefkgekyk
      181 qhfyvmdvyg sgevmkdqki sisfsneefl icmpvrskgt yrmigiipsa fggqndvkae
      241 nihafiqrtf gtqveginwf styhihhrva srfrqgrifl sgdaahihsp aggqgmntgi
      301 gdainlswkl aavlqrkaal sildtyeeer lpfaellvnt tdrafkrmva rdktsqffrk
      361 hifppvlsfl frfpyprhka ftilsqirik yrnsdlssgq gtnvqsgdrl pyvegnfesl
      421 qslnwqihvy gtaeeklkks mqekgfslhe fswnpylkka glqkdalyvi rpdgyigfis
      481 seqcidllhq ylnthkilpf tney
//
LOCUS       WP_257999355              97 aa            linear   BCT 02-MAR-2025
DEFINITION  autotransporter domain-containing protein [Akkermansia
            muciniphila].
ACCESSION   WP_257999355
VERSION     WP_257999355.1
KEYWORDS    RefSeq.
SOURCE      Akkermansia muciniphila
  ORGANISM  Akkermansia muciniphila
            Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
            Verrucomicrobiales; Akkermansiaceae; Akkermansia.
REFERENCE   1  (residues 1 to 97)
  AUTHORS   Oomen,C.J., van Ulsen,P., van Gelder,P., Feijen,M., Tommassen,J.
            and Gros,P.
  TITLE     Structure of the translocator domain of a bacterial autotransporter
  JOURNAL   EMBO J 23 (6), 1257-1266 (2004)
   PUBMED   15014442
REFERENCE   2  (residues 1 to 97)
  AUTHORS   Veiga,E., Sugawara,E., Nikaido,H., de Lorenzo,V. and Fernandez,L.A.
  TITLE     Export of autotransported proteins proceeds through an oligomeric
            ring shaped by C-terminal domains
  JOURNAL   EMBO J 21 (9), 2122-2131 (2002)
   PUBMED   11980709
REFERENCE   3  (residues 1 to 97)
  AUTHORS   Henderson,I.R., Navarro-Garcia,F. and Nataro,J.P.
  TITLE     The great escape: structure and function of the autotransporter
            proteins
  JOURNAL   Trends Microbiol 6 (9), 370-378 (1998)
   PUBMED   9778731
REFERENCE   4  (residues 1 to 97)
  AUTHORS   Pohlner,J., Halter,R., Beyreuther,K. and Meyer,T.F.
  TITLE     Gene structure and extracellular secretion of Neisseria gonorrhoeae
            IgA protease
  JOURNAL   Nature 325 (6103), 458-462 (1987)
   PUBMED   3027577
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015737.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03797.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Akkermansia muciniphila"
                     /db_xref="taxon:239935"
     Protein         1..97
                     /product="autotransporter domain-containing protein"
                     /calculated_mol_wt=9812
     Region          <10..97
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
ORIGIN      
        1 mglvgsnifg realaeirvn aaqdlgdrrg etnvsllgnp gfaqsvrgak vgttalqlga
       61 glsvpvgtkg tiyvngnadi rdgssalngs igyrydf
//
LOCUS       WP_257999514              89 aa            linear   BCT 02-MAR-2025
DEFINITION  P-II family nitrogen regulator, partial [Fischerella thermalis].
ACCESSION   WP_257999514
VERSION     WP_257999514.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 89)
  AUTHORS   Nichols,C.E., Sainsbury,S., Berrow,N.S., Alderton,D.,
            Saunders,N.J., Stammers,D.K. and Owens,R.J.
  TITLE     Structure of the PII signal transduction protein of Neisseria
            meningitidis at 1.85 A resolution
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 62 (Pt 6), 494-497
            (2006)
   PUBMED   16754965
REFERENCE   2  (residues 1 to 89)
  AUTHORS   Cheah,E., Carr,P.D., Suffolk,P.M., Vasudevan,S.G., Dixon,N.E. and
            Ollis,D.L.
  TITLE     Structure of the Escherichia coli signal transducing protein PII
  JOURNAL   Structure 2 (10), 981-990 (1994)
   PUBMED   7866749
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012753.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00543.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         <1..89
                     /product="P-II family nitrogen regulator"
                     /GO_function="GO:0030234 - enzyme regulator activity
                     [Evidence IEA]"
                     /GO_process="GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA]"
ORIGIN      
        1 elakilesld ksgvhghivi rnvagkglrg taedldmtml dnvyiiafcm peqlksaven
       61 irpvlnkfgg tcyvsdvmei rslkcvasl
//
LOCUS       WP_257999536             210 aa            linear   BCT 02-MAR-2025
DEFINITION  cold shock domain-containing protein [Xanthomonas arboricola].
ACCESSION   WP_257999536
VERSION     WP_257999536.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 210)
  AUTHORS   Schindelin,H., Jiang,W., Inouye,M. and Heinemann,U.
  TITLE     Crystal structure of CspA, the major cold shock protein of
            Escherichia coli
  JOURNAL   Proc Natl Acad Sci U S A 91 (11), 5119-5123 (1994)
   PUBMED   8197194
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012534.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00313.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..210
                     /product="cold shock domain-containing protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /calculated_mol_wt=22203
     Region          3..59
                     /region_name="CspC"
                     /note="Cold shock protein, CspA family [Transcription];
                     COG1278"
                     /db_xref="CDD:440889"
     Region          171..205
                     /region_name="Excalibur"
                     /note="Excalibur calcium-binding domain; pfam05901"
                     /db_xref="CDD:428664"
ORIGIN      
        1 mtrwntdrgf gfitpaqpgd dlfvhisafp rgfetprige visfeiepgk dgrrqavrvm
       61 ragqhaagrg arrqhaaars plphrslglg kvmllllvag aggyaylnrd allpapapte
      121 tpsaaparap anrtqpgrat lqsspartaa aaagttsatt aptphyscgg rkhcsqmtsc
      181 ddatwvlrnc pdttmdgdhd gvpceqqwch
//
LOCUS       WP_257999488             395 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Fischerella thermalis].
ACCESSION   WP_257999488
VERSION     WP_257999488.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 395)
  AUTHORS   Das,A.K., Cohen,P.W. and Barford,D.
  TITLE     The structure of the tetratricopeptide repeats of protein
            phosphatase 5: implications for TPR-mediated protein-protein
            interactions
  JOURNAL   EMBO J 17 (5), 1192-1199 (1998)
   PUBMED   9482716
REFERENCE   2  (residues 1 to 395)
  AUTHORS   Lamb,J.R., Tugendreich,S. and Hieter,P.
  TITLE     Tetratrico peptide repeat interactions: to TPR or not to TPR?
  JOURNAL   Trends Biochem Sci 20 (7), 257-259 (1995)
   PUBMED   7667876
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019339.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07719.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..395
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=43965
     Region          2..192
                     /region_name="Beta4Glucosyltransferase"
                     /note="UDP-glucose LOS-beta-1,4 glucosyltransferase is
                     required for biosynthesis of lipooligosaccharide; cd02511"
                     /db_xref="CDD:133005"
     Site            order(81,83)
                     /site_type="active"
                     /note="putative metal binding site [active]"
                     /db_xref="CDD:133005"
     Region          194..>387
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          200..230
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          239..267
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          278..304
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(280..281,284..285,287,311,314..315,318..319,
                     321..322,345,348..349,352..353,356)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          309..339
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          344..372
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mklslcmivk deekvlpkcl gsvrnvvdei vvldtgsrds tvhiankfga kvhefqwcnd
       61 fsaarnealk yvtgdwilvl dadeslaqki vpqlqeaihr eeyllinlvr qevgavqspy
      121 slvsrlfrnh peiyfsrpyh alvddsvtei lskepqwqvg ylqgvailhs gyqkdvidqn
      181 nkyakaqaam eqflathpdd pyvcsklgal yvetgkiseg vellargvtt aednydilye
      241 lyyhlgiays rvqnlkqava hyqaaiklpi ypmlklgayn nlgnlfktag dlnhakiaye
      301 nalkidpnfa tghynlgmtl kamglytdai acyqkaigin pnyadayqnl gvvllklgnl
      361 qaslaafgka ialheknnpq eaqrlrqglq emgli
//
LOCUS       WP_257999567             292 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Xanthomonas
            arboricola].
ACCESSION   WP_257999567
VERSION     WP_257999567.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 292)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..>292
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          42..>292
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation (C) domain of non-ribosomal
                     peptide synthetases(NRPSs) and similar domains including
                     the C-domain of SgcC5, a free-standing NRPS with both
                     ester- and amide- bond forming activity; cd19531"
                     /db_xref="CDD:380454"
ORIGIN      
        1 mteslderqr lmqaillnrt rratrtrdad ddaivarprd aelplslaqr rlwflcqlda
       61 tasaayhmpv slrlegeldv avlrtaldal varheslrtr flardgepeq vidpadrgfa
      121 lrefdvsllp aderaeavaa htceaaavpf dlaagplvrg rllrldahth vllltqhhii
      181 sdgwsvgvlv gelgvlyraf aegaanplpa lalqyadyaa wqhsqlagea wqrqidhwkq
      241 tlsgapslle lptdrprppv qsyrgaslpl rlepelvqal rswssrhgat lf
//
LOCUS       WP_257999601            1755 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF637 domain-containing protein [Klebsiella sp. Kd70 TUC-EEAOC].
ACCESSION   WP_257999601
VERSION     WP_257999601.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella sp. Kd70 TUC-EEAOC
  ORGANISM  Klebsiella sp. Kd70 TUC-EEAOC
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04830.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1755
                     /organism="Klebsiella sp. Kd70 TUC-EEAOC"
                     /db_xref="taxon:2071634"
     Protein         1..1755
                     /product="DUF637 domain-containing protein"
                     /calculated_mol_wt=183284
     Region          34..289
                     /region_name="TPS"
                     /note="TPS secretion domain; pfam05860"
                     /db_xref="CDD:461762"
     Region          842..979
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          952..1071
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          1235..1385
                     /region_name="DUF637"
                     /note="Possible hemagglutinin (DUF637); pfam04830"
                     /db_xref="CDD:428148"
ORIGIN      
        1 mdklahplar gaswlliyli avqplhpaia tgitaangnt qvamkpgnvp vvniatpnaa
       61 gishntyqdf nvgmpgavln natqggktql gvtidngnar lkgkpaelii nevtsgnrse
      121 lkgrlevfgn kagvmianpn gitcdgcgfi ntpsvtlttg kpqfdkqgal dalevkkgav
      181 iiggngldga gaeyvdvisr atelngkina ktltltqgan rvsfkdgtvk pvagegakpq
      241 lavdtkalgg myagkirlva teagvgvnls nvtstqrdis lttagkitls nvkaqtdlnv
      301 sgrdivtpag fsvraerdmt laattvdnrs sttahgdmrv fastvrntgn gaslhshknl
      361 wiqkdaqgnk aslvenrsat iktntgdlvi rtdrlentis kadtvvrter pttaqvsdsr
      421 lgwhpfnsgr gqgiahvvgd mdagepdkwf gsvdfknlav lqtekqhyta qtegarpvis
      481 agnnlylnag dlinrlgdis agrdavltgr slvsesrfeg vlgkyltyvy npyigslspe
      541 pqgggtfpgd lihtkevvkf rhtgettdwi pgrllvsris aggnlvadfs erieskepyv
      601 tnvqysgvia rpdtmtakni llragsivtt dvmkasgdit lqsdrgtkma lalmtagkdi
      661 svlagvsves wqselkgqni tlvsrggdvt shtsewpnff hsdglrwlgs leasrdlslt
      721 aggnillrnt rfpalsqnis lvangditfd kndamlwhgr pgavltyark qelfnrmlpg
      781 eplrasgdit lsgrrlslyg agleaggnis lssaantdln mrslsdlyse ffpdsripel
      841 rsnlkagsnl lissaadigv qgahivarkt atlqagkllw lgaygygvtd ssndnnrdel
      901 nvltrlhgak sltlaanggi qadgstltsd gnitltsggn mqfqsargtv yresrnswte
      961 svsqtgvtln sggaltvisg gsilfqasrl lakgamdvaa kggwlyaqam eesshyerqt
     1021 tkrkwwgkkt tvkqtkhttt nrvtefiagg nlsllsrdds tyeaskieak knatltstng
     1081 kvnflavknt tfeqtvstsk gfyikqankg ysegkwvlps vhaggkltvn aasgisadik
     1141 akngqallga italaalpgt ewlkglnsrs dvqwntvkda ydswnyksqs lnpavaavia
     1201 iaaaaatags slaatvassv tstvgggavt tgavtagmss laaqaavalv enqgnlsktl
     1261 salgssssvk slatsmvigg alagfdkvmn idvppdkaql palvknegwg kivqrvagqs
     1321 vissslntai nggsfkdnlt nallanignq inaegaglig dngeilgvpg kslshavvag
     1381 isaeigrgdg kgaaagalaa elagvimqss lfepanlner erqllrlqea lkgneakeqt
     1441 arvigaltga lithtpegvy sgadsaqnvf rynmtehmlq qyaldnqrdi laaskgdtaa
     1501 vkrvqarlea atmvavtagg glavtagglt ilgaapeivl aarliiagck tnpaicvnqa
     1561 giyavdiiap eaiigtgpiv agttlvvgkt idstkklaqq atntaedaik nmafnvqpvt
     1621 eivnkeiagf slsaktissl ndatknvkea tfsrvgrwms paefnkmqlt gkvvqggggq
     1681 tfvstngvld ykgaaspgsi yvefdvptss llkggkdgwf kligpdanas qqlllnkqgg
     1741 tqspdvkniv ildkk
//
LOCUS       WP_257999598             708 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin acylase family protein [Xanthomonas arboricola].
ACCESSION   WP_257999598
VERSION     WP_257999598.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 708)
  AUTHORS   Verhaert,R.M., Riemens,A.M., van der Laan,J.M., van Duin,J. and
            Quax,W.J.
  TITLE     Molecular cloning and analysis of the gene encoding the
            thermostable penicillin G acylase from Alcaligenes faecalis
  JOURNAL   Appl Environ Microbiol 63 (9), 3412-3418 (1997)
   PUBMED   9292993
REFERENCE   2  (residues 1 to 708)
  AUTHORS   Duggleby,H.J., Tolley,S.P., Hill,C.P., Dodson,E.J., Dodson,G. and
            Moody,P.C.
  TITLE     Penicillin acylase has a single-amino-acid catalytic centre
  JOURNAL   Nature 373 (6511), 264-268 (1995)
   PUBMED   7816145
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013927.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01804.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..708
                     /product="penicillin acylase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /GO_process="GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=77889
     Region          40..692
                     /region_name="Ntn_hydrolase"
                     /note="The Ntn hydrolases (N-terminal nucleophile) are a
                     diverse superfamily of of enzymes that are activated
                     autocatalytically via an N-terminally lcated nucleophilic
                     amino acid. N-terminal nucleophile (NTN-) hydrolase
                     superfamily, which contains a...; cl00467"
                     /db_xref="CDD:469781"
     Site            order(190,210,212,246)
                     /site_type="active"
                     /db_xref="CDD:238884"
ORIGIN      
        1 mprlssmrah arsaslcagl lialfcapqa agagkdsgei lwdrygvphv yartevgtfy
       61 gfgwaqthsh gnlllhlyge argraaeywg dkyaeqdrwl asndvypraq qwyrqqtpgf
      121 radldafaqg indyaaahpq aldaevkvvl pitgvdvvah ahrlmnyvyi aspakvlgea
      181 pkdgqardgs nawalmpskt rdghamllan phlpwgsgff tyyeahlngp gvdlygatqv
      241 glpilrfgfn kqlgftntvn tllgqttykl tlsgdgylld gkvlpfkret ktlkirqadg
      301 alktqtlqvr havqgpvfer ydgstvalrv agldrpdmlk qywdmgkaqd faqfqralkq
      361 lqvpmfnivy adnagnvlfl dngilpkhaq gdlkywsglv pgdtastlwr dvhsydelpk
      421 vinpaggfvq ntndppwlas wprvldpkkf payvaptgpm slraqnsvkm laehdsidfd
      481 qlvalkrtaq alaadrtlpq lyaaaadstd pdivaavkvl kawdrhfead srgallfeqw
      541 arlftgdary lsqagyatpw sldaplttps glkdpalalr qlkqavastr qaygaidrpy
      601 gevsrfhlgd vdvpgrggfg nlgafdvitw nppnadgqrl pqhgetwvsl vefstpikak
      661 glmsygnasq pgsahindql qllskgefrt lwttreqveq hlesrtdf
//
LOCUS       WP_257999563              76 aa            linear   BCT 02-MAR-2025
DEFINITION  autotransporter domain-containing protein, partial [Akkermansia
            muciniphila].
ACCESSION   WP_257999563
VERSION     WP_257999563.1
KEYWORDS    RefSeq.
SOURCE      Akkermansia muciniphila
  ORGANISM  Akkermansia muciniphila
            Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
            Verrucomicrobiales; Akkermansiaceae; Akkermansia.
REFERENCE   1  (residues 1 to 76)
  AUTHORS   Oomen,C.J., van Ulsen,P., van Gelder,P., Feijen,M., Tommassen,J.
            and Gros,P.
  TITLE     Structure of the translocator domain of a bacterial autotransporter
  JOURNAL   EMBO J 23 (6), 1257-1266 (2004)
   PUBMED   15014442
REFERENCE   2  (residues 1 to 76)
  AUTHORS   Veiga,E., Sugawara,E., Nikaido,H., de Lorenzo,V. and Fernandez,L.A.
  TITLE     Export of autotransported proteins proceeds through an oligomeric
            ring shaped by C-terminal domains
  JOURNAL   EMBO J 21 (9), 2122-2131 (2002)
   PUBMED   11980709
REFERENCE   3  (residues 1 to 76)
  AUTHORS   Henderson,I.R., Navarro-Garcia,F. and Nataro,J.P.
  TITLE     The great escape: structure and function of the autotransporter
            proteins
  JOURNAL   Trends Microbiol 6 (9), 370-378 (1998)
   PUBMED   9778731
REFERENCE   4  (residues 1 to 76)
  AUTHORS   Pohlner,J., Halter,R., Beyreuther,K. and Meyer,T.F.
  TITLE     Gene structure and extracellular secretion of Neisseria gonorrhoeae
            IgA protease
  JOURNAL   Nature 325 (6103), 458-462 (1987)
   PUBMED   3027577
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015737.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03797.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Akkermansia muciniphila"
                     /db_xref="taxon:239935"
     Protein         1..>76
                     /product="autotransporter domain-containing protein"
     Region          2..>76
                     /region_name="Autotransporter"
                     /note="Autotransporter beta-domain; pfam03797"
                     /db_xref="CDD:461054"
ORIGIN      
        1 mgaaftagyg dltagaadsa dghldsyyas lfgryqdrrw ahtliltggw ndaklnrtvn
       61 ygegsygtqg stsgwg
//
LOCUS       WP_257999612             484 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: terminase large subunit domain-containing protein
            [Akkermansia].
ACCESSION   WP_257999612
VERSION     WP_257999612.1
KEYWORDS    RefSeq.
SOURCE      Akkermansia
  ORGANISM  Akkermansia
            Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
            Verrucomicrobiales; Akkermansiaceae.
REFERENCE   1  (residues 1 to 484)
  AUTHORS   Baumann,R.G. and Black,L.W.
  TITLE     Isolation and characterization of T4 bacteriophage gp17 terminase,
            a large subunit multimer with enhanced ATPase activity
  JOURNAL   J Biol Chem 278 (7), 4618-4627 (2003)
   PUBMED   12466275
REFERENCE   2  (residues 1 to 484)
  AUTHORS   Lang,A.S., Taylor,T.A. and Beatty,J.T.
  TITLE     Evolutionary implications of phylogenetic analyses of the gene
            transfer agent (GTA) of Rhodobacter capsulatus
  JOURNAL   J Mol Evol 55 (5), 534-543 (2002)
   PUBMED   12399927
REFERENCE   3  (residues 1 to 484)
  AUTHORS   Mitchell,M.S., Matsuzaki,S., Imai,S. and Rao,V.B.
  TITLE     Sequence analysis of bacteriophage T4 DNA packaging/terminase genes
            16 and 17 reveals a common ATPase center in the large subunit of
            viral terminases
  JOURNAL   Nucleic Acids Res 30 (18), 4009-4021 (2002)
   PUBMED   12235385
REFERENCE   4  (residues 1 to 484)
  AUTHORS   Lang,A.S. and Beatty,J.T.
  TITLE     The gene transfer agent of Rhodobacter capsulatus and 'constitutive
            transduction' in prokaryotes
  JOURNAL   Arch Microbiol 175 (4), 241-249 (2001)
   PUBMED   11382219
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015211.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03237.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Akkermansia"
                     /db_xref="taxon:239934"
     Protein         1..484
                     /product="terminase large subunit domain-containing
                     protein"
                     /calculated_mol_wt=53473
     Region          11..411
                     /region_name="COG4373"
                     /note="Mu-like prophage FluMu protein gp28 [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443501"
ORIGIN      
        1 mmsslittpl elllpyqarw vadesrfkag iwsrqsgkdf staaeavrda mlrakttwmi
       61 aapserqame slakckewae afslalaaee ierqdgpntl lksgsitfan gsrilavpgr
      121 pdtvrgfsan lvltefaffe dpdatwravl psitnplrgg ekkvrlittp ngktgrgart
      181 ykiisdnllq pvegrkqhws chvvtiakav edglpidide lreslddpig waqeymcefl
      241 dssnvllpyd liataesasa tvscdpaiyl ggkldlrlgi dfgrsndptv cwtlervgdv
      301 lvtrevlvlr nmsvpdqmev lrhrikaarr vcydytgvgi gmgdvlvkef krwhpeghef
      361 grielctftp afkrlifprl rqafeaptrv ripidveire dlhamqqifr gtdytyeaph
      421 treghsdrct alalalraad ghvqhhlpap gsgriitgag lfggrshgsl fggrpslnhl
      481 psaa
//
LOCUS       WP_257999639             164 aa            linear   BCT 02-MAR-2025
DEFINITION  Imm71 family immunity protein, partial [Xanthomonas oryzae].
ACCESSION   WP_257999639
VERSION     WP_257999639.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas oryzae
  ORGANISM  Xanthomonas oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 164)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026940.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15602.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Xanthomonas oryzae"
                     /db_xref="taxon:347"
     Protein         1..>164
                     /product="Imm71 family immunity protein"
     Region          11..164
                     /region_name="Imm71"
                     /note="Immunity protein 71; pfam15602"
                     /db_xref="CDD:379737"
ORIGIN      
        1 msnnfpeglk lpnalerrqm fyqlkkessf tawnrmlely qawadvtees vrqadaqgwl
       61 eksgikeldy vgilkglahq eegvrrlrkg dkrvfkfdan gefvmanrqv shwiefvwrv
      121 evgemninre mtplwhefse clekmrhlgn eiwadiiegr yfed
//
LOCUS       WP_257999658             226 aa            linear   BCT 02-MAR-2025
DEFINITION  Imm71 family immunity protein, partial [Xanthomonas oryzae].
ACCESSION   WP_257999658
VERSION     WP_257999658.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas oryzae
  ORGANISM  Xanthomonas oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 226)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026940.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15602.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Xanthomonas oryzae"
                     /db_xref="taxon:347"
     Protein         <1..>226
                     /product="Imm71 family immunity protein"
     Region          <1..119
                     /region_name="Imm71"
                     /note="Immunity protein 71; pfam15602"
                     /db_xref="CDD:379737"
     Region          151..>226
                     /region_name="Imm72"
                     /note="Immunity protein 72; pfam15584"
                     /db_xref="CDD:292218"
ORIGIN      
        1 rsvreadskg wldesgises dyvgilkgla hqeegvrrlr kgdkrvfkfd angefvmayr
       61 ivshwhqmvw riemrengin eemtplwdef cfrlremgnl kseiwtdiie gryledpapn
      121 iygqwfrenv srmtfppvip dvpdpventl vatgsripcs giwepvdapk pkkfslfskp
      181 dvpkgflpyi aamnylhggs dapkarqete tdsaypdvvw rliwrd
//
LOCUS       WP_257999686              91 aa            linear   BCT 02-MAR-2025
DEFINITION  Imm72 family immunity protein, partial [Xanthomonas oryzae].
ACCESSION   WP_257999686
VERSION     WP_257999686.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas oryzae
  ORGANISM  Xanthomonas oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 91)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026922.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15584.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Xanthomonas oryzae"
                     /db_xref="taxon:347"
     Protein         <1..>91
                     /product="Imm72 family immunity protein"
     Region          <2..23
                     /region_name="Imm72"
                     /note="Immunity protein 72; pfam15584"
                     /db_xref="CDD:292218"
ORIGIN      
        1 vwrliwrddr yedgtipdee agyvfmqpdd paavvaasdq pqrkqvsams gqrasqagrw
       61 lvmddlnaaa qfnagdelpl hegrkvqwvl a
//
LOCUS       WP_257999693             186 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor plug domain-containing protein, partial
            [Xanthomonas oryzae].
ACCESSION   WP_257999693
VERSION     WP_257999693.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas oryzae
  ORGANISM  Xanthomonas oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Oke,M., Sarra,R., Ghirlando,R., Farnaud,S., Gorringe,A.R.,
            Evans,R.W. and Buchanan,S.K.
  TITLE     The plug domain of a neisserial TonB-dependent transporter retains
            structural integrity in the absence of its transmembrane
            beta-barrel
  JOURNAL   FEBS Lett 564 (3), 294-300 (2004)
   PUBMED   15111112
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07715.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Xanthomonas oryzae"
                     /db_xref="taxon:347"
     Protein         <1..186
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
     Region          17..>140
                     /region_name="FepA"
                     /note="Outer membrane receptor for ferrienterochelin and
                     colicins [Inorganic ion transport and metabolism];
                     COG4771"
                     /db_xref="CDD:443803"
ORIGIN      
        1 lnptatqdgg gvanltlala aivgaphaaa qdvpiadrqa tdldavvvtg tpkgcarkda
       61 pfaisvlseq tlqrsapsss vdmlragpgi saepsggqgg gqnlyvrglp aggwfymqyq
      121 edgmtlfdap qesflnidtl vfaghddrap grgprrhvaa vryecarwnr qrdhphgtat
      181 pearcg
//
LOCUS       WP_257999718             706 aa            linear   BCT 02-MAR-2025
DEFINITION  family 20 glycosylhydrolase [Akkermansia muciniphila].
ACCESSION   WP_257999718
VERSION     WP_257999718.1
KEYWORDS    RefSeq.
SOURCE      Akkermansia muciniphila
  ORGANISM  Akkermansia muciniphila
            Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
            Verrucomicrobiales; Akkermansiaceae; Akkermansia.
REFERENCE   1  (residues 1 to 706)
  AUTHORS   Tews,I., Perrakis,A., Oppenheim,A., Dauter,Z., Wilson,K.S. and
            Vorgias,C.E.
  TITLE     Bacterial chitobiase structure provides insight into catalytic
            mechanism and the basis of Tay-Sachs disease
  JOURNAL   Nat Struct Biol 3 (7), 638-648 (1996)
   PUBMED   8673609
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012931.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00728.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Akkermansia muciniphila"
                     /db_xref="taxon:239935"
     Protein         1..706
                     /product="family 20 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=80393
     Region          25..148
                     /region_name="Glyco_hydro_20b"
                     /note="Glycosyl hydrolase family 20, domain 2; cl03741"
                     /db_xref="CDD:446174"
     Region          154..422
                     /region_name="GH20_hexosaminidase"
                     /note="Beta-N-acetylhexosaminidases of glycosyl hydrolase
                     family 20 (GH20) catalyze the removal of beta-1,4-linked
                     N-acetyl-D-hexosamine residues from the non-reducing ends
                     of N-acetyl-beta-D-hexosaminides including
                     N-acetylglucosides and N-acetylgalactosides; cd02742"
                     /db_xref="CDD:119331"
     Site            order(163,250,292..293,319,334,392,394)
                     /site_type="active"
                     /db_xref="CDD:119331"
ORIGIN      
        1 mliyfswgpl aggvvtapvp efsspalipy pskvvrgage agfrsvhvkv gsdvpgrddl
       61 mkeikdifrt sgiqgslnsg gaaegamtwe lfpdarmkge gydlsvglgk atvragsfgg
      121 ffnalqtlrq lvfnregefa mpvvrisdkp afvlrgimld vgryymspal ikevmrrlsr
      181 ykintlhlhl tddpawrlev kkypaltdga fhwksrlpgr fytqaqlkdl tdycarlniq
      241 vipeidmpgh sqpfaramkt gmqtekgvsi lkdvvdeavs lfpgrffhmg sdeahismkd
      301 fiprmaehir rkgkevvvws pggphdkdsv lmcwgeneag armdknmkri dsngfyidwa
      361 dsqsgvyqvf fqqpcevpqg ddkalgaimp vwcdgnlsse rrvleqypfy pcaltfaerv
      421 wrgsatkrrd ymaqlpprgt dgwkefrefe qrlafhrdhf fqgvpfayvk qadvawslvg
      481 pfdhrgnndt sfeperriap syrdgdrila wkktpvygaa vhvrhlfamf nmhrnqyrtd
      541 hwptlmsrev gkedgtcyal tfirspreqe vwlmfglngm wghsggyrsa rapeqgswdf
      601 sggdvwlngr rvnpprwpfk slpwtgwgkg rieeapltwe gyffrppvki klrkglnrvl
      661 irsvfghwkg ddgqrswffc cipvlwdgih yrevpgleyd prpdar
//
LOCUS       WP_257999740             576 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme [Akkermansia muciniphila].
ACCESSION   WP_257999740
VERSION     WP_257999740.1
KEYWORDS    RefSeq.
SOURCE      Akkermansia muciniphila
  ORGANISM  Akkermansia muciniphila
            Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
            Verrucomicrobiales; Akkermansiaceae; Akkermansia.
REFERENCE   1  (residues 1 to 576)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Akkermansia muciniphila"
                     /db_xref="taxon:239935"
     Protein         1..576
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /calculated_mol_wt=63159
     Region          1..558
                     /region_name="PRK09124"
                     /note="ubiquinone-dependent pyruvate dehydrogenase"
                     /db_xref="CDD:181661"
ORIGIN      
        1 mhrvadqive ilekagvkri ygivgdslnp vtdalrrrkt iewihvrhee vaafaasaea
       61 qlsgnlavcc gssgpgnlhl inglfdahrn hapvlaiash ipqsqvgmey fqathpeqlf
      121 kecsayaelv seasqapsil msaiqhawar rdvgvvvlpg diadapaemk nlvhppsytr
      181 envvpehesv sllarmlddh rritffcgag cagaedkvvr lahrlkapia ytwrgkdyfe
      241 hdnplgigmt gllgwgdayk amhesdmlvl wgtdfpyfnf iptkpeivqi drrgevlgrr
      301 crldlgicgd vsvtaealln mvqektdsrh ldaalnrhar dvkemnayme gndkespirp
      361 eqlttalnrh aasdavftvd tgtpciwsar flcatpgrrt lasfnhgsma nampmaigaq
      421 meyperqvia lcgdgglsml lgdlitivqy rlpvkivvyn ndcldfiqle mqaaglipwq
      481 inlnnpsfaa vadavgikgf lldkssqvdq mvdmflnypg aalldahvdr dalalppyis
      541 mgqaadfsla mmkqtlagev kqvwntlagn rklfkp
//
LOCUS       WP_257999787             184 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Xanthomonas oryzae].
ACCESSION   WP_257999787
VERSION     WP_257999787.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas oryzae
  ORGANISM  Xanthomonas oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 184)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 184)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Xanthomonas oryzae"
                     /db_xref="taxon:347"
     Protein         1..>184
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          10..>78
                     /region_name="YiaA"
                     /note="Uncharacterized membrane protein YiaA [Function
                     unknown]; COG4682"
                     /db_xref="CDD:443718"
     Region          79..>183
                     /region_name="VgrG"
                     /note="Uncharacterized conserved protein VgrG, implicated
                     in type VI secretion and phage assembly [Intracellular
                     trafficking, secretion, and vesicular transport, Mobilome:
                     prophages, transposons, General function prediction only];
                     COG3501"
                     /db_xref="CDD:442724"
ORIGIN      
        1 mrtrianhss vafvgalwvg lllfgvfaav svqksvrdrv dgigvtaihh geagcsvvaa
       61 lslltvglcn atpplsakiv eavfadyapi aswqwseets aflaqarprs ycvqyresdl
      121 dfvqrllaee glgwrlqeaa pspgghqlvv fadstaqpqd pssaqggglr yhrsdateaa
      181 dsvl
//
LOCUS       WP_257999783              54 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Xanthomonas oryzae].
ACCESSION   WP_257999783
VERSION     WP_257999783.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas oryzae
  ORGANISM  Xanthomonas oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 54)
  AUTHORS   Davies,D.R., Mahnke Braam,L., Reznikoff,W.S. and Rayment,I.
  TITLE     The three-dimensional structure of a Tn5 transposase-related
            protein determined to 2.9-A resolution
  JOURNAL   J Biol Chem 274 (17), 11904-11913 (1999)
   PUBMED   10207011
REFERENCE   2  (residues 1 to 54)
  AUTHORS   DasSarma,S.
  TITLE     Identification and analysis of the gas vesicle gene cluster on an
            unstable plasmid of Halobacterium halobium
  JOURNAL   Experientia 49 (6-7), 482-486 (1993)
   PUBMED   8335077
REFERENCE   3  (residues 1 to 54)
  AUTHORS   Ferrante,A.A. and Lessie,T.G.
  TITLE     Nucleotide sequence of IS402 from Pseudomonas cepacia
  JOURNAL   Gene 102 (1), 143-144 (1991)
   PUBMED   1650732
REFERENCE   4  (residues 1 to 54)
  AUTHORS   De Meirsman,C., Van Soom,C., Verreth,C., Van Gool,A. and
            Vanderleyden,J.
  TITLE     Nucleotide sequence analysis of IS427 and its target sites in
            Agrobacterium tumefaciens T37
  JOURNAL   Plasmid 24 (3), 227-234 (1990)
   PUBMED   1963949
REFERENCE   5  (residues 1 to 54)
  AUTHORS   Sato,S., Nakada,Y. and Shiratsuchi,A.
  TITLE     IS421, a new insertion sequence in Escherichia coli
  JOURNAL   FEBS Lett 249 (1), 21-26 (1989)
   PUBMED   2542093
REFERENCE   6  (residues 1 to 54)
  AUTHORS   Kroger,M. and Hobom,G.
  TITLE     Structural analysis of insertion sequence IS5
  JOURNAL   Nature 297 (5862), 159-162 (1982)
   PUBMED   6281654
REFERENCE   7  (residues 1 to 54)
  AUTHORS   Klaer,R., Kuhn,S., Tillmann,E., Fritz,H.J. and Starlinger,P.
  TITLE     The sequence of IS4
  JOURNAL   Mol Gen Genet 181 (2), 169-175 (1981)
   PUBMED   6268937
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01609.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..54
                     /organism="Xanthomonas oryzae"
                     /db_xref="taxon:347"
     Protein         <1..>54
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <1..>52
                     /region_name="transpos_IS4_2"
                     /note="IS4 family transposase; NF033591"
                     /db_xref="CDD:468100"
ORIGIN      
        1 flqqlralip ddvrpilvtd agfrtpwfra vsamgwdwvg rlrgrtqvkp qdvp
//
LOCUS       WP_257999803              88 aa            linear   BCT 02-MAR-2025
DEFINITION  Imm71 family immunity protein, partial [Xanthomonas oryzae].
ACCESSION   WP_257999803
VERSION     WP_257999803.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas oryzae
  ORGANISM  Xanthomonas oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 88)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026940.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15602.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Xanthomonas oryzae"
                     /db_xref="taxon:347"
     Protein         <1..>88
                     /product="Imm71 family immunity protein"
     Region          <1..84
                     /region_name="Imm71"
                     /note="Immunity protein 71; pfam15602"
                     /db_xref="CDD:379737"
ORIGIN      
        1 vrrlrkgdkr vfkfdangef vmanrqvshw iefvwrvevg emninremtp lwhefsecle
       61 kmrhlgneiw adiiegryfe dpapniyg
//
LOCUS       WP_257999813             873 aa            linear   BCT 02-MAR-2025
DEFINITION  pyridoxal-phosphate dependent enzyme, partial [Xanthomonas oryzae].
ACCESSION   WP_257999813
VERSION     WP_257999813.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas oryzae
  ORGANISM  Xanthomonas oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012512.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00291.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Xanthomonas oryzae"
                     /db_xref="taxon:347"
     Protein         <1..873
                     /product="pyridoxal-phosphate dependent enzyme"
     Region          36..346
                     /region_name="IlvA"
                     /note="Threonine deaminase [Amino acid transport and
                     metabolism]; COG1171"
                     /db_xref="CDD:440784"
     Region          513..>767
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(547..548,551,620,653,656,680,683)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:99738"
     Site            683
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99738"
ORIGIN      
        1 pqmwlasfpd rvdqtipnfm qtttnrsgpe llenlyenir ksypalsrkl vktplvelpw
       61 lgannrrvwa klecmqrtgs fklrgaynsl rllapgafvy tasagnhgla iatlarelgl
      121 hanifvplna seikirrlra vgarivqgga dvseayvaah qeaqengrhy ispfdhpdvv
      181 agqgslalei aeqddrrfdh illpfggggl ltgfgcaaak lwpetrlhga hpaifgrnlh
      241 ngfdgqqmlk svmptladgl aiehepynwl wpliqalapi fhavpedrik tsmmtllhqe
      301 silsegagai alapllfdes pnlkgdilvl vsggnisvpl lakamtavie eprlrkingl
      361 rastlgiels asasapgkts qaaektsays pspiseatll smwlqlvdrv eqgldklqat
      421 lqqhlsftlr eslpvdpive sfmgdaldst rkmisscrsp gldgrqvaqr yrlliqsfgl
      481 arsalnwcsa stdqskeimf fdpadlqtss vnyerygsva lrelelnlvh aigfgggaht
      541 alltssgqaa ystlesyllr evfpkqpdva rvarvpylyf ealeqlealp qvsmtiaedw
      601 svealiecve htdshvvfad pmanigelpc fdfqalanal rtrdwrnrwl vidgtmisgg
      661 fnpftlfdap hhpqilyfes gskylqlgld lqmlgvvvcs eqhapslarh rrnlgtglnq
      721 nqvarfplfg reqllqrmqr ltrnaeyiaa sldaiehpcs klrvayprdw rqrqwnhggg
      781 vvaitfsepc lnnrhclegl ieliinscrt agvsitkgvs fgfgvtrisa aaaiaestdp
      841 flrfsmgeet seqleqlvac vtqsiytfle tfg
//
LOCUS       WP_257999865             309 aa            linear   BCT 02-MAR-2025
DEFINITION  isocitrate/isopropylmalate family dehydrogenase [Leuconostoc
            mesenteroides].
ACCESSION   WP_257999865
VERSION     WP_257999865.1
KEYWORDS    RefSeq.
SOURCE      Leuconostoc mesenteroides
  ORGANISM  Leuconostoc mesenteroides
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Leuconostoc.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012407.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00180.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Leuconostoc mesenteroides"
                     /db_xref="taxon:1245"
     Protein         1..309
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /GO_function="GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /calculated_mol_wt=34134
     Region          1..>251
                     /region_name="Iso_dh"
                     /note="Isocitrate/isopropylmalate dehydrogenase; cl00445"
                     /db_xref="CDD:444908"
ORIGIN      
        1 mmyklailkg dkesssvidr algivkssvn dstafevtel pfgvnaalsf neplpnqtlr
       61 elknydgilv galnqevgtd sllsvqeslv alrkylnitl ackvvqisdn nvdasplknq
      121 ivrdtdfiiv qsakrandhv dgnisvddfa qdtityeqre veqvitagfe ramnrkravt
      181 ivtpfdsfyt skiwaltaek iakiypdvvv nyvslscvis tviqqptsld vvvapkwvdq
      241 ilneesqkit glpetvpvsm knnsgqmlyq lpqinvddkn lmmavgedta klilkecfnh
      301 ydnlqkigv
//
LOCUS       WP_257999681             308 aa            linear   BCT 02-MAR-2025
DEFINITION  FKBP-type peptidyl-prolyl cis-trans isomerase N-terminal
            domain-containing protein [Xanthomonas oryzae].
ACCESSION   WP_257999681
VERSION     WP_257999681.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas oryzae
  ORGANISM  Xanthomonas oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 308)
  AUTHORS   Saul,F.A., Arie,J.P., Vulliez-le Normand,B., Kahn,R., Betton,J.M.
            and Bentley,G.A.
  TITLE     Structural and functional studies of FkpA from Escherichia coli, a
            cis/trans peptidyl-prolyl isomerase with chaperone activity
  JOURNAL   J Mol Biol 335 (2), 595-608 (2004)
   PUBMED   14672666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013509.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01346.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Xanthomonas oryzae"
                     /db_xref="taxon:347"
     Protein         1..308
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase
                     N-terminal domain-containing protein"
                     /GO_process="GO:0006457 - protein folding [Evidence IEA]"
                     /calculated_mol_wt=32449
     Region          118..210
                     /region_name="FKBP_N"
                     /note="Domain amino terminal to FKBP-type peptidyl-prolyl
                     isomerase; pfam01346"
                     /db_xref="CDD:460169"
     Region          206..306
                     /region_name="FkpA"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG0545"
                     /db_xref="CDD:440311"
ORIGIN      
        1 mvamsasmpa mshqpaaaat kekpalnass ekstrdnvsy aigmdvarsf epiaqdidvn
       61 amqraienaf kggkpllsde rtqatdtalr talaarngqq vpgvapgaap aapskenvgl
      121 mlgdravgps lagikdeidl silmdavrtv fskgttrltq qeamatmqaf asakqgaaga
      181 knreegnafl aknktekgvi ttasglqymv lrqgsgerpm rtnkvrvnye gkllngqvfd
      241 ssyqrgqpae fgldqvipgw tegvalmpvg skyrfwipsn laygpngtqg igpdatltfd
      301 velmgilp
//
LOCUS       WP_257999866             607 aa            linear   BCT 02-MAR-2025
DEFINITION  SpaA isopeptide-forming pilin-related protein, partial [Leuconostoc
            mesenteroides].
ACCESSION   WP_257999866
VERSION     WP_257999866.1
KEYWORDS    RefSeq.
SOURCE      Leuconostoc mesenteroides
  ORGANISM  Leuconostoc mesenteroides
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Leuconostoc.
REFERENCE   1  (residues 1 to 607)
  AUTHORS   Kang,H.J., Paterson,N.G., Gaspar,A.H., Ton-That,H. and Baker,E.N.
  TITLE     The Corynebacterium diphtheriae shaft pilin SpaA is built of tandem
            Ig-like modules with stabilizing isopeptide and disulfide bonds
  JOURNAL   Proc Natl Acad Sci U S A 106 (40), 16967-16971 (2009)
   PUBMED   19805181
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2009 Oct 27;106(43):18427]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037639.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17802.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Leuconostoc mesenteroides"
                     /db_xref="taxon:1245"
     Protein         <1..607
                     /product="SpaA isopeptide-forming pilin-related protein"
     Region          230..330
                     /region_name="CollagenBindB"
                     /note="Repeat unit of collagen-binding protein domain B;
                     cl15753"
                     /db_xref="CDD:417766"
     Site            order(231,233,263..264,277,279,281,303,305,307,310,315,
                     317..318)
                     /site_type="other"
                     /note="domain interaction interfaces [polypeptide
                     binding]"
                     /db_xref="CDD:212461"
     Region          <326..>540
                     /region_name="ClfA"
                     /note="Clumping factor A-related surface protein, MSCRAMM
                     (microbial surface components recognizing adhesive matrix
                     molecules) family, DEv-IgG fold [Cell
                     wall/membrane/envelope biogenesis]; COG4932"
                     /db_xref="CDD:443959"
ORIGIN      
        1 pgvtsafnnn kyrwdsytqk yisdgvnfyy nvdglpikdt wsgtlgeaai skkigteiha
       61 lgiqladdyy qgnnvylsks eirarmnllv spshyqdand avgvqkylyd qaqtvlsqfn
      121 tvnqgsisdp lgsqfiygdd tptvksvgss vvqnlptvtk sngsisvsni nlgkdqeiqi
      181 hyqvhlntes dnfkpdywyq mngkttftpt kdsnavefgv psakapgtvl kvikqwqelt
      241 dsskrpdsin fevtrttnnq sndwratgtl sksdnwsktf kqlnrnnqsv slpaydnkgg
      301 tfnyqvlnes tdgyvssitn kinestitnt qygliidkya snsknkltga efivkstdgk
      361 qsytlkdnql qqltpgdyti qetkspsgyq ldstvypitl sqdgkwsssg qginvksptt
      421 dgngykdgfs iatdksnntd knnvvrfvkn dtfkkfdltv nkvdkttgna lkgakftltd
      481 sdgktsvyke tdptstftfe nlssgtytlk eskapdgyia skdvtiiisd dgsikvtnnn
      541 gdwkstlqnd agnnqisltv nnsnktvfps tggtgivrym liagafilia lgasgyyifr
      601 ikrgnrs
//
LOCUS       WP_257999958              53 aa            linear   BCT 02-MAR-2025
DEFINITION  SulP family inorganic anion transporter, partial [Fischerella
            thermalis].
ACCESSION   WP_257999958
VERSION     WP_257999958.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00916.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..53
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..>53
                     /product="SulP family inorganic anion transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:1902358 - sulfate transmembrane transport
                     [Evidence IEA]"
     Region          <3..>40
                     /region_name="SUL1"
                     /note="Sulfate permease or related transporter, MFS
                     superfamily [Inorganic ion transport and metabolism];
                     COG0659"
                     /db_xref="CDD:440424"
ORIGIN      
        1 mvaatgglsr svvnfsanan tplasmital mialtmmqlg nyqlpitglh ryd
//
LOCUS       WP_257999964              41 aa            linear   BCT 02-MAR-2025
DEFINITION  type II toxin-antitoxin system HicB family antitoxin [Fischerella
            thermalis].
ACCESSION   WP_257999964
VERSION     WP_257999964.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 41)
  AUTHORS   Winter,A.J., Williams,C., Isupov,M.N., Crocker,H., Gromova,M.,
            Marsh,P., Wilkinson,O.J., Dillingham,M.S., Harmer,N.J.,
            Titball,R.W. and Crump,M.P.
  TITLE     The molecular basis of protein toxin HicA-dependent binding of the
            protein antitoxin HicB to DNA
  JOURNAL   J Biol Chem 293 (50), 19429-19440 (2018)
   PUBMED   30337369
REFERENCE   2  (residues 1 to 41)
  AUTHORS   Hall,A.M., Gollan,B. and Helaine,S.
  TITLE     Toxin-antitoxin systems: reversible toxicity
  JOURNAL   Curr Opin Microbiol 36, 102-110 (2017)
   PUBMED   28279904
REFERENCE   3  (residues 1 to 41)
  AUTHORS   Bibi-Triki,S., Li de la Sierra-Gallay,I., Lazar,N., Leroy,A., Van
            Tilbeurgh,H., Sebbane,F. and Pradel,E.
  TITLE     Functional and structural analysis of HicA3-HicB3, a novel
            toxin-antitoxin system of Yersinia pestis
  JOURNAL   J Bacteriol 196 (21), 3712-3723 (2014)
   PUBMED   25112480
REFERENCE   4  (residues 1 to 41)
  AUTHORS   Makarova,K.S., Grishin,N.V. and Koonin,E.V.
  TITLE     The HicAB cassette, a putative novel, RNA-targeting toxin-antitoxin
            system in archaea and bacteria
  JOURNAL   Bioinformatics 22 (21), 2581-2584 (2006)
   PUBMED   16895922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10003996
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..41
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..41
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /GO_component="GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA]"
                     /calculated_mol_wt=4417
     Region          6..>38
                     /region_name="HicB"
                     /note="Antitoxin component HicB of the HicAB
                     toxin-antitoxin system [Defense mechanisms]; COG1598"
                     /db_xref="CDD:441206"
ORIGIN      
        1 mkarsftviv ykeedmyiae cpevgtvaqg atieqavelr a
//
LOCUS       WP_258000159              59 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Vibrio parahaemolyticus].
ACCESSION   WP_258000159
VERSION     WP_258000159.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 59)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 59)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..59
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..59
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=6617
     Region          <8..45
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
ORIGIN      
        1 msstghldlh yhdlraegac qlferglniv eiskitghrd invlnniylr vgvkqvhhk
//
LOCUS       WP_258000200              76 aa            linear   BCT 02-MAR-2025
DEFINITION  IS3 family transposase, partial [Xanthomonas oryzae].
ACCESSION   WP_258000200
VERSION     WP_258000200.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas oryzae
  ORGANISM  Xanthomonas oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024673.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13276.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Xanthomonas oryzae"
                     /db_xref="taxon:347"
     Protein         <1..>76
                     /product="IS3 family transposase"
     Region          <4..>67
                     /region_name="transpos_IS3"
                     /note="IS3 family transposase; NF033516"
                     /db_xref="CDD:468052"
ORIGIN      
        1 lryrpredrn velrerilal ahrhrrygvg mislklrqeg rlvnykrver lyceqqlqvc
       61 rrtrkkvpvg erapll
//
LOCUS       WP_257999894             193 aa            linear   BCT 02-MAR-2025
DEFINITION  putative peptidoglycan-binding domain-containing protein
            [Akkermansia muciniphila].
ACCESSION   WP_257999894
VERSION     WP_257999894.1
KEYWORDS    RefSeq.
SOURCE      Akkermansia muciniphila
  ORGANISM  Akkermansia muciniphila
            Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
            Verrucomicrobiales; Akkermansiaceae; Akkermansia.
REFERENCE   1  (residues 1 to 193)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     COG3926 and COG5526: a tale of two new lysozyme-like protein
            families
  JOURNAL   Protein Sci 14 (10), 2574-2581 (2005)
   PUBMED   16155206
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020931.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09374.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Akkermansia muciniphila"
                     /db_xref="taxon:239935"
     Protein         1..193
                     /product="putative peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=21271
     Region          <94..181
                     /region_name="ZliS"
                     /note="Lysozyme family protein [General function
                     prediction only]; COG3926"
                     /db_xref="CDD:443130"
ORIGIN      
        1 mnpterkmaa ailrfedsrv tgpdslrvsr lpaadkggkw eicgicdgie pdvfnrlkal
       61 ldagrreeaw egclqyvldn taavrswlgs dafpgvefil rdhyfnsgsr ntgkilqral
      121 nihgaglvvd givgprtrqe lqdqlaatge avflialqek rqafyrsckq fptfgrgwln
      181 rcddafsvaq alv
//
LOCUS       WP_258000222              72 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleotidyltransferase domain-containing protein, partial
            [Xanthomonas oryzae].
ACCESSION   WP_258000222
VERSION     WP_258000222.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas oryzae
  ORGANISM  Xanthomonas oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 72)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     DNA polymerase beta belongs to an ancient nucleotidyltransferase
            superfamily
  JOURNAL   Trends Biochem Sci 20 (9), 345-347 (1995)
   PUBMED   7482698
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014021.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01909.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Xanthomonas oryzae"
                     /db_xref="taxon:347"
     Protein         <1..>72
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /GO_function="GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
     Region          7..>72
                     /region_name="PRK13746"
                     /note="aminoglycoside resistance protein; Provisional"
                     /db_xref="CDD:184296"
ORIGIN      
        1 ivkdlfgssi vgvylfgsav ngglrinsdv dvlvvvnhsl pqltrkklte rlmtisgkig
       61 ntdsvrplev tv
//
LOCUS       WP_258000225              85 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Xanthomonas oryzae].
ACCESSION   WP_258000225
VERSION     WP_258000225.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas oryzae
  ORGANISM  Xanthomonas oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017416.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05598.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Xanthomonas oryzae"
                     /db_xref="taxon:347"
     Protein         <1..>85
                     /product="transposase"
     Region          1..>85
                     /region_name="IS5"
                     /note="Transposase and inactivated derivatives, IS5 family
                     [Mobilome: prophages, transposons]; COG3039"
                     /db_xref="CDD:442273"
ORIGIN      
        1 phspvsgrpg rqpyalatmw rihlqqqwya lsdpameeal heiptlrrfa qlgclddipd
       61 estilnvrrl lethglaarm leavn
//
LOCUS       WP_258000240             257 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Xanthomonas oryzae].
ACCESSION   WP_258000240
VERSION     WP_258000240.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas oryzae
  ORGANISM  Xanthomonas oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 257)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 257)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Xanthomonas oryzae"
                     /db_xref="taxon:347"
     Protein         <1..>257
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          1..>257
                     /region_name="VgrG"
                     /note="Uncharacterized conserved protein VgrG, implicated
                     in type VI secretion and phage assembly [Intracellular
                     trafficking, secretion, and vesicular transport, Mobilome:
                     prophages, transposons, General function prediction only];
                     COG3501"
                     /db_xref="CDD:442724"
ORIGIN      
        1 pqaafrfdvq aalpahpitt qyretdwafv trllaeagla wryahaqdad sqataatlvi
       61 fdpqaqapds gtirfhrsdl aeaddaigaf gerrgvvpta stvtswhseq vravgaqaqa
      121 eagalpplev yvqpragrfa qeataqdqaq arldalrvph tlhagagsar vlaagaaftl
      181 rqhaqhdgqr fvpvaiehva vnnlgqgiva lldapelehg syrnrflavp aatplralpq
      241 drprmpgpqs arvvgva
//
LOCUS       WP_258000246             923 aa            linear   BCT 02-MAR-2025
DEFINITION  S-layer homology domain-containing protein [Bacillus sp.
            Marseille-P3661].
ACCESSION   WP_258000246
VERSION     WP_258000246.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. Marseille-P3661
  ORGANISM  Bacillus sp. Marseille-P3661
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 923)
  AUTHORS   Mesnage,S., Fontaine,T., Mignot,T., Delepierre,M., Mock,M. and
            Fouet,A.
  TITLE     Bacterial SLH domain proteins are non-covalently anchored to the
            cell surface via a conserved mechanism involving wall
            polysaccharide pyruvylation
  JOURNAL   EMBO J 19 (17), 4473-4484 (2000)
   PUBMED   10970841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012613.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00395.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..923
                     /organism="Bacillus sp. Marseille-P3661"
                     /db_xref="taxon:1936234"
     Protein         1..923
                     /product="S-layer homology domain-containing protein"
                     /calculated_mol_wt=98187
     Region          102..403
                     /region_name="NAGPA"
                     /note="Sugar-P-sugar glycosidase (uncovering enzyme, UCE),
                     NAGPA superfamily [Carbohydrate transport and metabolism];
                     COG4632"
                     /db_xref="CDD:443670"
     Region          750..791
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          811..852
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          870..911
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
ORIGIN      
        1 mklkrnrlai lltillvlqs fasaatasas vlgtkvadns tkispgvtys sqayegsstk
       61 qavnqltvdl ndpftvldvh ipnpinnttt vtkvaqqnnr egnfvvgaan agffdtvsky
      121 pinliakenk vinvgvfdlp itsplnapva fgvnangkav igeynlrydv rigdftqaik
      181 kvnttrtegs vvlytkanqt tgsnewgtei iitdvspsps smevgskmig tvskvvrfgq
      241 agnstvpang lvlsahgsew aeklkniteg dsvqvelglg dvwqdakyvi gtgpllvkng
      301 qvsismdeaq afskgrnprt aiatnqagdk vfiitidgrq sgysngvglr dlanhlislg
      361 aynainldgg gstqmavrql gssqptlanq psdnwqrpvs tvlqvistap tsdpktikls
      421 kpagkilkgt piditvdyvi dqymnpvafs psaitlsaeg gigstegmkf iaenvgtgkv
      481 vahynggvge lpltvvdtfd kleispksav vgvnetvqfs gkasnnngep llfdtslikw
      541 svegdigsit adgkftagak kssgyivatf gqvqakvavq vgadpvlidg fedlakwsad
      601 qakatasiak sasgepvkqg ssslkltydf ttaeegtkaa yaklinpiti qgnpkaiglw
      661 vygdgaghwl rgtisdgtgk qhaisfteeg eltwkgwkyv qakvpanlpl plkfdriyva
      721 etvkekqnsg viyldklqsv yvdnytevsf kdvssdhwai gsitflsdrn tirgyedgtf
      781 rpgaqitraq aaamiarelk leaandielk ftdvpekhya indikkvaaa giitgksadt
      841 fapdepltra emavvlnray slqgeaenkf tdvkdnhwai ksikalvand itggypdgtf
      901 kpsapttrae fssfmervik lak
//
LOCUS       WP_258000327             330 aa            linear   BCT 02-MAR-2025
DEFINITION  LysM peptidoglycan-binding domain-containing protein [Bacillus sp.
            Marseille-P3661].
ACCESSION   WP_258000327
VERSION     WP_258000327.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. Marseille-P3661
  ORGANISM  Bacillus sp. Marseille-P3661
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 330)
  AUTHORS   Bateman,A. and Bycroft,M.
  TITLE     The structure of a LysM domain from E. coli membrane-bound lytic
            murein transglycosylase D (MltD)
  JOURNAL   J Mol Biol 299 (4), 1113-1119 (2000)
   PUBMED   10843862
REFERENCE   2  (residues 1 to 330)
  AUTHORS   Joris,B., Englebert,S., Chu,C.P., Kariyama,R., Daneo-Moore,L.,
            Shockman,G.D. and Ghuysen,J.M.
  TITLE     Modular design of the Enterococcus hirae muramidase-2 and
            Streptococcus faecalis autolysin
  JOURNAL   FEMS Microbiol Lett 70 (3), 257-264 (1992)
   PUBMED   1352512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01476.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Bacillus sp. Marseille-P3661"
                     /db_xref="taxon:1936234"
     Protein         1..330
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=37375
     Region          <32..125
                     /region_name="PRK06347"
                     /note="1,4-beta-N-acetylmuramoylhydrolase"
                     /db_xref="CDD:180536"
     Region          <32..76
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
     Region          157..298
                     /region_name="PGRP"
                     /note="Peptidoglycan recognition proteins (PGRPs) are
                     pattern recognition receptors that bind, and in certain
                     cases, hydrolyze peptidoglycans (PGNs) of bacterial cell
                     walls. PGRPs have been divided into three classes: short
                     PGRPs (PGRP-S), that are small (20...; cl02712"
                     /db_xref="CDD:470657"
     Site            order(157,194,273,294,296)
                     /site_type="active"
                     /note="amidase catalytic site [active]"
                     /db_xref="CDD:133475"
     Site            order(157,273,296)
                     /site_type="other"
                     /note="Zn binding residues [ion binding]"
                     /db_xref="CDD:133475"
     Site            order(158..159,190,194,208,220,223,273,277,294..296)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:133475"
ORIGIN      
        1 mkknsvlllc iifvvlinef payavqikpt niyvvqsgds leeiamkyet sveeikatng
       61 lqenvlfvgq rlwvpvlyev vagdtlqtia rahnstveii kttnglssde lhlgqiikin
      121 pkkmtmqgkh ilmtrdefkn wlqhhkfsrk itliqhhhtw apsykhfngy nhfsmlkgme
      181 nyhirekgwk tiaqnittfp dgkiavsrpf nvtpegsigw kansvgltie nvgnfdrghd
      241 vmtaeqketi vyitallsmk fgltpsidsi tyhhwwslkt gervldkgpe ynvktcpgtn
      301 ffggntttsa knnfyplver kiqeisashq
//
LOCUS       WP_258000347            1284 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258000347
VERSION     WP_258000347.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..1284
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..1284
                     /product="Ig-like domain-containing protein"
     Region          <1..54
                     /region_name="Big_13"
                     /note="Bacterial Ig-like domain; pfam19077"
                     /db_xref="CDD:465968"
     Region          <51..488
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          <300..725
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          604..>995
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          1004..1255
                     /region_name="COG2931"
                     /note="Ca2+-binding protein, RTX toxin-related [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:442175"
ORIGIN      
        1 iltdgngnpi gqvtadgsgn wsftpstpla dgtvvnatat dpagntggqg sttvdaiapa
       61 tptvnlsngs slsgtaepgs tviltdgngn piaevtadgs gnwtftpatp langtvvnav
      121 aqdpagntgp qgsttvdava pntpvvnpsn gnllngtaep gstvtltdgn gnpigqttad
      181 gsgnwsftpg sqlpngtvvn vtasdaagnt sapatttvds slpsipqvdp sngsvisgta
      241 dagntiiitd gngnpigqvt adgsgnwsft pgiplpdgtv vnvvarspsn vdsapavitv
      301 dgvapaapvi dpsngteisg taeagatvil tdgggnpigq atadgsgnwt ftpstplang
      361 tvinavaqdp agntsgpasv tvdaiappap vidpsngvvi sgtaeagatv iltdgngnpi
      421 gqvtadgsgn wsftpgtpla ngsvinalaq daagntsgpa sttvdsvapa tpvldpsngt
      481 visgtaeaga tviltdgggn pigqatadgs gnwsftpgtp ltngtvinav aqdaagntsg
      541 pvsttvdava patpvidpsn gvelsgtaep gvrviltdgn gnpigqtlad gsgnwtftpg
      601 tplangtvvn avaqdpagnt sgpasttvdt vapatpvina sngsvitgta evgakviltd
      661 gngnpigett adgsgnwtft pgtplangtv inavaedaag nasgpasttv dsvapsapll
      721 sisadgallt gtaepnsqvr ivvngdtanp itvtvdgagn fslpfappli tgeliagvav
      781 daagnvsgpa tinapdlapp tisvpeaadt winaaeigdg iqvdvtvrpt mqvgqvvtvk
      841 fagqngyeae vshtltagdi aagnltltlt ppggmgpfpe gastvtadin ggtastpvpf
      901 tidtippatp vlslvgnilt isaepgtelt vtvdvggvta tatvtadnsg laslnlltdl
      961 didfswdqll naqvsvvgrd pagnpsntas igvgtsieqp vtignfgldv slnplnprfg
     1021 fsgttepdss vvirvitpal nvellpiqad ssgnfslnll sptiltqlgl nitdilnlgs
     1081 qisfnlvstd sngndsaayg itltpnglsl nigqidvngt sgddvlsgan gssehinggd
     1141 gsdlifnvgt gdhvvagngn dtiqitatdf vsidggagfd tlvlangidl dynavgvgtl
     1201 snleridlgk gdsgsvltlt aaevdaitda nntlqitgen ndtlnvvgav ntgttqling
     1261 itydvytfgs ttlliedntv qvvv
//
LOCUS       WP_258000362             229 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Bacillus sp. Marseille-P3661].
ACCESSION   WP_258000362
VERSION     WP_258000362.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. Marseille-P3661
  ORGANISM  Bacillus sp. Marseille-P3661
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 229)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Bacillus sp. Marseille-P3661"
                     /db_xref="taxon:1936234"
     Protein         1..229
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=26292
     Region          16..202
                     /region_name="INT_RitC_C_like"
                     /note="C-terminal catalytic domain of recombinase RitC, a
                     component of the recombinase trio; cd01182"
                     /db_xref="CDD:271183"
     Site            order(51,152,155..156,187)
                     /site_type="active"
                     /db_xref="CDD:271183"
ORIGIN      
        1 msipvkkaek ktvnyltldg iklllempdv stedgrrdla lltvlydtga rvqeiidltp
       61 siirfdkpyt vkligkgnka rivplmeptv kilkqymteq dltrinansy plffnkrkek
      121 ltraginyil nkyislaqek nktlipevft chclrhskam hmlqsgvnlv yirdflghss
      181 vqvtevyakt dskekreaie kayvdvtpke esiwenntdl lawlkrfnk
//
LOCUS       WP_258000394              33 aa            linear   BCT 02-MAR-2025
DEFINITION  group II intron maturase-specific domain-containing protein
            [Bacillus sp. Marseille-P3661].
ACCESSION   WP_258000394
VERSION     WP_258000394.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. Marseille-P3661
  ORGANISM  Bacillus sp. Marseille-P3661
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 33)
  AUTHORS   Centron,D. and Roy,P.H.
  TITLE     Presence of a group II intron in a multiresistant Serratia
            marcescens strain that harbors three integrons and a novel gene
            fusion
  JOURNAL   Antimicrob Agents Chemother 46 (5), 1402-1409 (2002)
   PUBMED   11959575
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019984.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08388.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..33
                     /organism="Bacillus sp. Marseille-P3661"
                     /db_xref="taxon:1936234"
     Protein         1..33
                     /product="group II intron maturase-specific
                     domain-containing protein"
                     /calculated_mol_wt=3939
     Region          <1..32
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 mfnsnirgwn nyygkfykse rysalrhink alk
//
LOCUS       WP_257999951              68 aa            linear   BCT 02-MAR-2025
DEFINITION  succinylglutamate desuccinylase/aspartoacylase domain-containing
            protein [Fischerella thermalis].
ACCESSION   WP_257999951
VERSION     WP_257999951.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 68)
  AUTHORS   Hsieh,J.M., Tsirulnikov,K., Sawaya,M.R., Magilnick,N., Abuladze,N.,
            Kurtz,I., Abramson,J. and Pushkin,A.
  TITLE     Structures of aminoacylase 3 in complex with acetylated substrates
  JOURNAL   Proc Natl Acad Sci U S A 107 (42), 17962-17967 (2010)
   PUBMED   20921362
REFERENCE   2  (residues 1 to 68)
  AUTHORS   Kaul,R., Gao,G.P., Balamurugan,K. and Matalon,R.
  TITLE     Cloning of the human aspartoacylase cDNA and a common missense
            mutation in Canavan disease
  JOURNAL   Nat Genet 5 (2), 118-123 (1993)
   PUBMED   8252036
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016817.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04952.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..68
                     /product="succinylglutamate desuccinylase/aspartoacylase
                     domain-containing protein"
                     /GO_function="GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /calculated_mol_wt=7480
     Region          <1..60
                     /region_name="Peptidase_M14_like"
                     /note="M14 family of metallocarboxypeptidases and related
                     proteins; cl11393"
                     /db_xref="CDD:472171"
ORIGIN      
        1 miapqikdye plypnspmfl gfdgqeisyq gnstcypvfv aeaaylekqi amcltiqqqv
       61 tlsddvge
//
LOCUS       WP_258000416             390 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258000416
VERSION     WP_258000416.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>390
                     /product="DUF6531 domain-containing protein"
     Region          150..211
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
     Region          287..>390
                     /region_name="Bacuni_01323_like"
                     /note="Uncharacterized protein conserved in Bacteroidetes;
                     cl25912"
                     /db_xref="CDD:474722"
ORIGIN      
        1 mkikkytssi rvyffiiffp afiispsana elyqwwvfpy geagrgfpdp vsacewvysl
       61 isinwkkkme pgkgsekgkv lhckytgngv ywevisavlr gsacpagail nnetgscdcr
      121 pgyemddagc klpdkngpdk gapppegcag npvnitngnk yqvehdlitp iplarhyngl
      181 dglwrhsfsa ritrkddsyl lyredgkvse ftgagrdlts ltdlgklsrl agrffytsel
      241 neiiefdpyg klarlttkeg rkyrvergas ltisdehgnk lvlsegtnhq llraqtggis
      301 ieytydkeqr ltsvtrtdgq ystktqylyd dprngklltg ildnnnrrfa twtyddqgra
      361 issehangae kvtlaynddg sttvtneygk
//
LOCUS       WP_258000444             125 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Bacillus sp. Marseille-P3661].
ACCESSION   WP_258000444
VERSION     WP_258000444.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. Marseille-P3661
  ORGANISM  Bacillus sp. Marseille-P3661
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Bacillus sp. Marseille-P3661"
                     /db_xref="taxon:1936234"
     Protein         1..125
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=13321
     Region          <1..93
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mfllaisqst fsilaagffy giaygtvtpt lqaiavsnvp kvkqgtanam ffssmdlgia
       61 igstglgiva shagyhfiyg lsilflvill vgyriifdkg ltplkmirdl krhphsinse
      121 nkrga
//
LOCUS       WP_258000491             291 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphogluconate dehydrogenase C-terminal domain-containing protein
            [Bacillus sp. Marseille-P3661].
ACCESSION   WP_258000491
VERSION     WP_258000491.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. Marseille-P3661
  ORGANISM  Bacillus sp. Marseille-P3661
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028206.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16896.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Bacillus sp. Marseille-P3661"
                     /db_xref="taxon:1936234"
     Protein         1..291
                     /product="phosphogluconate dehydrogenase C-terminal
                     domain-containing protein"
                     /calculated_mol_wt=31717
     Region          9..>178
                     /region_name="COG5495"
                     /note="Predicted oxidoreductase, contains short-chain
                     dehydrogenase (SDR) and DUF2520 domains [General function
                     prediction only]"
                     /db_xref="CDD:444246"
     Region          130..281
                     /region_name="PGDH_C"
                     /note="Phosphogluconate dehydrogenase (decarboxylating)
                     C-term; pfam16896"
                     /db_xref="CDD:435636"
ORIGIN      
        1 mtnvnrdhst invtivgagg kmgcritdnl vkgtynlsfv ekaesgiarl kerglsttag
       61 eeaypsadfi ilavpdalig risaeivpqm kpdatlilld paaayanqvs lrndctfvvt
      121 hpchpqlfge qdsdearkdm fggiaakqdi vialqqgree nfeiarqici dmfapvvecy
      181 ritvehmall epaaaevvaa saacimkeat dqvikmgipa daarsfmlgh iqiplaiafn
      241 nvnpfsdaak iaidygyeki fkenwkdvft kesldevikk mlhleettln k
//
LOCUS       WP_258000470             501 aa            linear   BCT 02-MAR-2025
DEFINITION  cbb3-type cytochrome c oxidase subunit I [Bacillus sp.
            Marseille-P3661].
ACCESSION   WP_258000470
VERSION     WP_258000470.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. Marseille-P3661
  ORGANISM  Bacillus sp. Marseille-P3661
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 501)
  AUTHORS   Gopalasingam,C.C., Johnson,R.M., Chiduza,G.N., Tosha,T.,
            Yamamoto,M., Shiro,Y., Antonyuk,S.V., Muench,S.P. and Hasnain,S.S.
  TITLE     Dimeric structures of quinol-dependent nitric oxide reductases
            (qNORs) revealed by cryo-electron microscopy
  JOURNAL   Sci Adv 5 (8), eaax1803 (2019)
   PUBMED   31489376
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 501)
  AUTHORS   Tsukihara,T., Aoyama,H., Yamashita,E., Tomizaki,T., Yamaguchi,H.,
            Shinzawa-Itoh,K., Nakashima,R., Yaono,R. and Yoshikawa,S.
  TITLE     The whole structure of the 13-subunit oxidized cytochrome c oxidase
            at 2.8 A
  JOURNAL   Science 272 (5265), 1136-1144 (1996)
   PUBMED   8638158
REFERENCE   3  (residues 1 to 501)
  AUTHORS   Castresana,J., Lubben,M., Saraste,M. and Higgins,D.G.
  TITLE     Evolution of cytochrome oxidase, an enzyme older than atmospheric
            oxygen
  JOURNAL   EMBO J 13 (11), 2516-2525 (1994)
   PUBMED   8013452
REFERENCE   4  (residues 1 to 501)
  AUTHORS   Papa,S., Capitanio,N., Glaser,P. and Villani,G.
  TITLE     The proton pump of heme-copper oxidases
  JOURNAL   Cell Biol Int 18 (5), 345-355 (1994)
   PUBMED   8049679
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012343.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00115.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Bacillus sp. Marseille-P3661"
                     /db_xref="taxon:1936234"
     Protein         1..501
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /GO_process="GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /calculated_mol_wt=55479
     Region          30..471
                     /region_name="Heme_Cu_Oxidase_I"
                     /note="Heme-copper oxidase subunit I. Heme-copper oxidases
                     are transmembrane protein complexes in the respiratory
                     chains of prokaryotes and mitochondria which catalyze the
                     reduction of O2 and simultaneously pump protons across the
                     membrane. The superfamily is...; cl00275"
                     /db_xref="CDD:469701"
     Site            order(36,40,54,61,65..66,69,119,373,380,383..384,439..440,
                     469)
                     /site_type="other"
                     /note="Low-spin heme binding site [chemical binding]"
                     /db_xref="CDD:238461"
     Site            order(228,233..234,366,370..371,439)
                     /site_type="other"
                     /note="Putative water exit pathway"
                     /db_xref="CDD:238461"
     Site            order(241,290..291,378)
                     /site_type="active"
                     /note="Binuclear center (active site) [active]"
                     /db_xref="CDD:238461"
     Site            order(241,245,256,290..291,317,321)
                     /site_type="active"
                     /note="K-pathway [active]"
                     /db_xref="CDD:238461"
     Site            order(291,370..371,439..440)
                     /site_type="other"
                     /note="Putative proton exit pathway"
                     /db_xref="CDD:238461"
ORIGIN      
        1 menntlkvsi dsktkksvvf pivisgsiil lmmvfgvlml lgqgnllein pgmfykimti
       61 hgtgmvgaga lagsaimwyf lmqyvplkqv afttnfvffl igvsmvlvgi fafdfaggwt
      121 flyplpaisg gmwgktaatl ylsgmlvigt gflilflevs raimkeygsf snalgwpyil
      181 gkktgygppa avvastmvci vditaliaga silimsiini fissftidpl laknliyafg
      241 hifansiiym gviavyells rytnrpwksn kifliawnms tlftiiiyph hllmdtvmpk
      301 wmliigqvls ymngmpvlvv taygalmiiy ysgikwdvas sflflsmfgw vigvvpaivd
      361 ativinhvmh ntkwvpghfh mymgigacam iigfmyyltk veggrtdrgv drialwfyll
      421 fflgvtgsfl fsgkvsaprr waehypewia advagaifgm vvtfcfllfm vryihyaski
      481 gklvslndey sseqirlkkh a
//
LOCUS       WP_258000517            1184 aa            linear   BCT 02-MAR-2025
DEFINITION  C80 family cysteine peptidase, partial [Vibrio vulnificus].
ACCESSION   WP_258000517
VERSION     WP_258000517.1
KEYWORDS    RefSeq.
SOURCE      Vibrio vulnificus
  ORGANISM  Vibrio vulnificus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 1184)
  AUTHORS   Lupardus,P.J., Shen,A., Bogyo,M. and Garcia,K.C.
  TITLE     Small molecule-induced allosteric activation of the Vibrio cholerae
            RTX cysteine protease domain
  JOURNAL   Science 322 (5899), 265-268 (2008)
   PUBMED   18845756
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023141.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11713.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..1184
                     /organism="Vibrio vulnificus"
                     /db_xref="taxon:672"
     Protein         <1..1184
                     /product="C80 family cysteine peptidase"
     Region          82..274
                     /region_name="C80_RtxA-like"
                     /note="peptidase C80 cysteine binding domain of RTX toxin
                     RtxA and related proteins; cd20501"
                     /db_xref="CDD:410974"
     Site            order(111,114..115,118,157..160,168,206..208,242..246,252)
                     /site_type="other"
                     /note="peptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410974"
     Site            order(122..123,153,204,237,239,250..251)
                     /site_type="other"
                     /note="allosteric effector binding site [chemical
                     binding]"
                     /db_xref="CDD:410974"
     Region          <345..>394
                     /region_name="MARTX_Nterm"
                     /note="MARTX multifunctional-autoprocessing
                     repeats-in-toxin holotoxin N-terminal region; NF012221"
                     /db_xref="CDD:467957"
     Region          <817..977
                     /region_name="COG2931"
                     /note="Ca2+-binding protein, RTX toxin-related [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:442175"
ORIGIN      
        1 naageaifnr vvvmdgntla sykptfgdkt tmqgildlpv fdatpikkpg tsdvdgnaki
       61 vdvtkealad gkilhnqnvn dwervvvtpt adggetrfdg qiivqmenda vaakaaanla
      121 gkhpessvvv qldsdgnyrv vygdpskldg klrwqlvghg rddsesnntr lsgysadela
      181 vklakfqqsf nqaenvsskp dhisivgcsl vsddkqkgfg hqfinamdan glrldvsvrs
      241 selavdetgr khtkdangnw vqkaesnkvs lswneqgdvv akderihngi aegdidlsri
      301 gisdvdepar gaigdnndvf dapekrkaet etssssannk lsysgniqvn vgdgeftavn
      361 wgtsnvgikv gtggfkslaf gdnnvmihig ngeskhsfdi ggyqalegaq mfignrnvsf
      421 nkgrsndliv mmdksiptpp lvnpfdgaar isgvlqsiat sgegkdwlaa qeqqwtlsga
      481 kkfvkdmsgl dqsssvdyts lveldsqner ssrglkhdae aalnkqynqw lsgngnndts
      541 klsradklrq aneklafnfa vggqgadiqv ttgnwnfmfg dniqsildtn lgslfglmtq
      601 qfsatgqakt tftytpedlp rqlknkllgq lagvgaettl adifgvdyta sghivsrnge
      661 avdgvailke mlevigefsg dqlqafvdpa klldslkagi ktgadgiksf aethglkeka
      721 peeeeskssv slngeilnst qgatvadgst ettetpdraf gfnslnlpnl fatifsqdkq
      781 kemkslvanl kenltadlln mkektfdflr nsghlqgdgd inlslgnynf nwggdgkdlg
      841 aylgdnnnfw ggrgddvfya tgtsniftgg egndmgvlmg renmmfggdg ndtavvagri
      901 nhvflgagdd qsfvfgegge idtgsgrdyv vtsgnfnrvd tgddqdysvt ignnnqvelg
      961 agddfanvfg nynrinasag ndvvklmgyh avlnggeged hliaaaiskf sqfnggegrd
     1021 lmvlggyqnt fkggtdvdsf vvsgdvidnl vedirsedni vfngidwqkl wfersgydlk
     1081 lsilrdpasd sdqakfehig svtfsdyfng nraqviiamg ekdatgerey ttlsesaida
     1141 lvqamsgfdp qagdngfidn ldsksrvait tawadvvhkk gitv
//
LOCUS       WP_258000559              67 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Xanthomonas oryzae].
ACCESSION   WP_258000559
VERSION     WP_258000559.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas oryzae
  ORGANISM  Xanthomonas oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017416.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05598.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Xanthomonas oryzae"
                     /db_xref="taxon:347"
     Protein         <1..>67
                     /product="transposase"
     Region          1..>67
                     /region_name="transpos_IS5_1"
                     /note="IS5 family transposase; NF033578"
                     /db_xref="CDD:468095"
ORIGIN      
        1 lylkhaydls deavcerwle npywqfftge vvfqtcvpcd pssltrwrqp lgeagmeall
       61 ahtihta
//
LOCUS       WP_258000589             147 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Xanthomonas oryzae].
ACCESSION   WP_258000589
VERSION     WP_258000589.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas oryzae
  ORGANISM  Xanthomonas oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 147)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 147)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Xanthomonas oryzae"
                     /db_xref="taxon:347"
     Protein         1..>147
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          17..>143
                     /region_name="VgrG"
                     /note="Uncharacterized conserved protein VgrG, implicated
                     in type VI secretion and phage assembly [Intracellular
                     trafficking, secretion, and vesicular transport, Mobilome:
                     prophages, transposons, General function prediction only];
                     COG3501"
                     /db_xref="CDD:442724"
ORIGIN      
        1 mdpvatvlsa lsaaphqqer llrlhtplgp dvlvaetldg resvdgggfr fdvgalsana
       61 glplddllgq pvllelltae srtalrpfhg hvtaferlgs ngglaryrlr vepwlallaq
      121 rvdsyvfqdt svveiaesvf adyagqg
//
LOCUS       WP_258000606              75 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Xanthomonas oryzae].
ACCESSION   WP_258000606
VERSION     WP_258000606.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas oryzae
  ORGANISM  Xanthomonas oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017416.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05598.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Xanthomonas oryzae"
                     /db_xref="taxon:347"
     Protein         <1..>75
                     /product="transposase"
     Region          1..>75
                     /region_name="transpos_IS5_1"
                     /note="IS5 family transposase; NF033578"
                     /db_xref="CDD:468095"
ORIGIN      
        1 prlpirlmas lldlkhaykl sdeelverwa qnvvwqhfsg mafyqprlpc datqvgrfsv
       61 aigeagveel lkati
//
LOCUS       WP_258000620              93 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Xanthomonas oryzae].
ACCESSION   WP_258000620
VERSION     WP_258000620.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas oryzae
  ORGANISM  Xanthomonas oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017416.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05598.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Xanthomonas oryzae"
                     /db_xref="taxon:347"
     Protein         <1..>93
                     /product="transposase"
     Region          1..>93
                     /region_name="IS5"
                     /note="Transposase and inactivated derivatives, IS5 family
                     [Mobilome: prophages, transposons]; COG3039"
                     /db_xref="CDD:442273"
ORIGIN      
        1 mwrihllqqw yalsdpamee alheiatlrr ftqlgglddi pdeptilnvr rllethdlaa
       61 rmleavnahl arkgqslrsg tivdarliaa pss
//
LOCUS       WP_258000643             147 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Xanthomonas oryzae].
ACCESSION   WP_258000643
VERSION     WP_258000643.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas oryzae
  ORGANISM  Xanthomonas oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 147)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Xanthomonas oryzae"
                     /db_xref="taxon:347"
     Protein         <1..>147
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <2..147
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            29..62
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 kvvqtmsgie asskkiadii svidgiafqt nilalnaave aarageqgrg favvasevrt
       61 laqrssgaak eikeliddsv qrvtdgsvlv hsagttmgei vasvqrvtdi mgeisaasqe
      121 qsagieqvnq tvtqmdettq qnaalve
//
LOCUS       WP_258000646             246 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Xanthomonas oryzae].
ACCESSION   WP_258000646
VERSION     WP_258000646.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas oryzae
  ORGANISM  Xanthomonas oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 246)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 246)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 246)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 246)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Xanthomonas oryzae"
                     /db_xref="taxon:347"
     Protein         <1..246
                     /product="ATP-binding protein"
     Region          <16..246
                     /region_name="PRK11100"
                     /note="sensory histidine kinase CreC; Provisional"
                     /db_xref="CDD:236846"
ORIGIN      
        1 aglqwrkvlh lelesalegk ayvvqylqsl themkrplav irsasellte pvletdrqhf
       61 vasiraqeqr ltetidklla laeveqhgwl qtreriglrr lpqaaaeais lraaatgvmv
      121 dvdasaatsg dhhvlgdgfl lrqalinlle naiafspqds cvrlhpqlhd ehweladedr
      181 gsgvpdyaie rvferfysla lpqtgqrgsg fglpfvgeva rlhggdvtpg nrdgggamam
      241 lplpig
//
LOCUS       WP_258000668             303 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: dihydrodipicolinate synthase family protein
            [Akkermansia].
ACCESSION   WP_258000668
VERSION     WP_258000668.1
KEYWORDS    RefSeq.
SOURCE      Akkermansia
  ORGANISM  Akkermansia
            Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
            Verrucomicrobiales; Akkermansiaceae.
REFERENCE   1  (residues 1 to 303)
  AUTHORS   Mirwaldt,C., Korndorfer,I. and Huber,R.
  TITLE     The crystal structure of dihydrodipicolinate synthase from
            Escherichia coli at 2.5 A resolution
  JOURNAL   J Mol Biol 246 (1), 227-239 (1995)
   PUBMED   7853400
REFERENCE   2  (residues 1 to 303)
  AUTHORS   Izard,T., Lawrence,M.C., Malby,R.L., Lilley,G.G. and Colman,P.M.
  TITLE     The three-dimensional structure of N-acetylneuraminate lyase from
            Escherichia coli
  JOURNAL   Structure 2 (5), 361-369 (1994)
   PUBMED   8081752
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012904.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00701.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Akkermansia"
                     /db_xref="taxon:239934"
     Protein         1..303
                     /product="dihydrodipicolinate synthase family protein"
                     /GO_function="GO:0016829 - lyase activity [Evidence IEA]"
                     /calculated_mol_wt=32683
     Region          5..290
                     /region_name="TIM-like beta/alpha barrel domains"
                     /note="A large family of domains similar to triose
                     phosphate isomerase (TIM) which, in general, share an
                     eight beta/alpha closed barrel structure; cl21457"
                     /db_xref="CDD:473867"
     Site            169
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:188634"
ORIGIN      
        1 mslklhglva avhtpfkadg slnpssvdaq akllasqgik lafitgstge sssmqleerk
       61 eiysawkeas akhgveviah tgsnsvwdar elasfaqecg fvatsslaps yykpgtvqrl
      121 veccafaasg apdlpyyyyd ipvltgvrfn pvdfirlake qipnfagikf tnpdlalyqt
      181 tlnydetvdi pwgvdewftg alsvgakgav gssfnfapal yqklmkafae gdvetardcq
      241 wksvqminil askgymgcak almgwlgvnl gparlpqgnp tadqlkelrs elegigffqw
      301 aln
//
LOCUS       WP_258000710            1053 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-binding protein [Janthinobacterium sp. ROICE36].
ACCESSION   WP_258000710
VERSION     WP_258000710.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. ROICE36
  ORGANISM  Janthinobacterium sp. ROICE36
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024842.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13450.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Janthinobacterium sp. ROICE36"
                     /db_xref="taxon:2048670"
     Protein         1..1053
                     /product="NAD(P)-binding protein"
                     /calculated_mol_wt=116114
     Region          <114..>165
                     /region_name="ADC"
                     /note="Acetoacetate decarboxylase (ADC); cl01919"
                     /db_xref="CDD:445607"
     Region          330..402
                     /region_name="NAD_binding_8"
                     /note="NAD(P)-binding Rossmann-like domain; pfam13450"
                     /db_xref="CDD:433218"
     Region          <991..1037
                     /region_name="COG3349"
                     /note="Uncharacterized protein, contains NAD-binding
                     domain and a Fe-S cluster [General function prediction
                     only]"
                     /db_xref="CDD:442577"
ORIGIN      
        1 mtaipsarpa yiyqggsvmm hsplqlkqse mygyfvrgdl aklqatvntt lnqvagrtmt
       61 lkalspyvml tftrvnhads snpvdqakgw itevdivtwi mvgemdasgk lahiywypch
      121 ifvddamali ngrelfgypk ylcdydmpaa gneplrcsva akgfqhfspe tklalhplle
      181 vnatvqtgqh kpvnsfleli eqaftiflsi pdffdmdhag wadilsllrk pridqiflkq
      241 fpdsagvkav yqalvaapae ikrlhsarll gyeyectlha fdsfpldqtl glrlgpqaai
      301 lpfnvnfdft ampgeelvdn sqiapekiai lgggvaamta ayyltnqpgw qnrhaitvyq
      361 lgwrlggkga sgrnaqvgqr ieehglhiwf gfyanafkmi keayaslerp pgaplatwrd
      421 afkqhdyval sedvkgqwrn wsivfptlpg epgeggedit lwqmaiamvg wieqwirqir
      481 qvadtdariv rasaqigdge gegegvwpgw lrrladevvg qadelgldvg lsvgalvalv
      541 adlapdstrh dqarhqllas tlngirawlr lryrslidgd dalrrlftcl dlgitvmkgm
      601 fedgvfkhgf dvindidfra wlkkhggdeq fsvnsapvrg fydlvfayeg gdfakpniea
      661 gtllramari glaykggimf kmqagmgdti ftpmyevlkk rgvefkffqr veelvpgagd
      721 idsiritqqv qlkdpaagya plvdvkglac wpsapdyaqi epaqaallqa qevklesyws
      781 dwpqqyqqaf grqlpatvlk kgvdfdkvvf gisigslpal cpqllaqspa lqlaaekvkt
      841 vatqayqvwl nkslaqmgwt tqpkgqqpvl saftepydtw apmdqllahe dwpaglepkn
      901 vsyfcsafpi dsyppvtdtg fparcaakak qgalhqlere igalwpeaga pgafpwqwlv
      961 dakagtgpar fnsqywranv dpseryvmsv vgstqyrlat dqsgfsnlfl tgdwirtgln
     1021 agcveaavma gmqtaramtg ypaviqgetd fqa
//
LOCUS       WP_258000732             220 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258000732
VERSION     WP_258000732.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 220)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>220
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          <1..>220
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 lpfdlgtlqe vcskqlgldv qetldiaqtl yethkattyp rsdsgylpes mlaevpavld
       61 allatdpslr pligqldrnq rsrawndgkv tahhgiiptl epanlsamne kelavyrlir
      121 ahylaqflph hefdrtvaqf scgsqslaav gkqiavtgwr evlatpgpdd adgedaqrsq
      181 vlpalhagls cpvgkvdlka lktlppkpyt qgelikamkt
//
LOCUS       WP_258000750             215 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator
            [Janthinobacterium sp. ROICE36].
ACCESSION   WP_258000750
VERSION     WP_258000750.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. ROICE36
  ORGANISM  Janthinobacterium sp. ROICE36
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Janthinobacterium sp. ROICE36"
                     /db_xref="taxon:2048670"
     Protein         1..215
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=22951
     Region          15..209
                     /region_name="EpsA"
                     /note="transcriptional regulator EpsA; TIGR03020"
                     /db_xref="CDD:274393"
ORIGIN      
        1 mhailgahgi svssdfflws qgplqallph ailvcaqlga dgsvlrseaw hsavldpvql
       61 rdindtrdgq varlaqawra ggrkaavigq vlvhgnvmag ggsffalfca slpdparqay
      121 vlelllpylh lhwlalqerv rvpvaglaas raasarelev lhwvsigksn eevgqilgis
      181 ggtvkshlqr iyklfgvsnr tqavsrglal rllsh
//
LOCUS       WP_258000175             192 aa            linear   BCT 02-MAR-2025
DEFINITION  CRISPR system precrRNA processing endoribonuclease RAMP protein
            Cas6 [Fischerella thermalis].
ACCESSION   WP_258000175
VERSION     WP_258000175.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 192)
  AUTHORS   Carte,J., Wang,R., Li,H., Terns,R.M. and Terns,M.P.
  TITLE     Cas6 is an endoribonuclease that generates guide RNAs for invader
            defense in prokaryotes
  JOURNAL   Genes Dev 22 (24), 3489-3496 (2008)
   PUBMED   19141480
REFERENCE   2  (residues 1 to 192)
  AUTHORS   Makarova,K.S., Grishin,N.V., Shabalina,S.A., Wolf,Y.I. and
            Koonin,E.V.
  TITLE     A putative RNA-interference-based immune system in prokaryotes:
            computational analysis of the predicted enzymatic machinery,
            functional analogies with eukaryotic RNAi, and hypothetical
            mechanisms of action
  JOURNAL   Biol Direct 1, 7 (2006)
   PUBMED   16545108
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 192)
  AUTHORS   Haft,D.H., Selengut,J., Mongodin,E.F. and Nelson,K.E.
  TITLE     A guild of 45 CRISPR-associated (Cas) protein families and multiple
            CRISPR/Cas subtypes exist in prokaryotic genomes
  JOURNAL   PLoS Comput Biol 1 (6), e60 (2005)
   PUBMED   16292354
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021551.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10040.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     gene            1..192
                     /gene="cas6"
     Protein         1..192
                     /product="CRISPR system precrRNA processing
                     endoribonuclease RAMP protein Cas6"
                     /calculated_mol_wt=21114
     Region          <3..102
                     /region_name="Cas6a"
                     /note="CRISPR/Cas system endoribonuclease Cas6, RAMP
                     superfamily [Defense mechanisms]; COG5551"
                     /db_xref="CDD:444294"
     Region          <150..187
                     /region_name="sigma70-ECF"
                     /note="RNA polymerase sigma factor, sigma-70 family;
                     TIGR02937"
                     /db_xref="CDD:274357"
ORIGIN      
        1 mirkifnfhn dfsgmpvdqe iflawvdehv litrhqltsa kvlagkkgav tgftgaiefg
       61 lskqaakqlq fyklfyalgk lapycgtghk ttfglgqtrl gwslqatpev pnvgsllakr
      121 iedltdifka qrkrtggvra qeiaakwati larrqmgesl qviaqdmgip yetvktyakl
      181 arralannsd sv
//
LOCUS       WP_258000793             398 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Janthinobacterium sp. ROICE36].
ACCESSION   WP_258000793
VERSION     WP_258000793.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. ROICE36
  ORGANISM  Janthinobacterium sp. ROICE36
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Janthinobacterium sp. ROICE36"
                     /db_xref="taxon:2048670"
     Protein         1..398
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=40061
     Region          21..358
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(31..32,35..36,39,71,121..122,124..126,129,149,
                     152..153,156,224,227..228,231..233,236,264,268,319..320,
                     324,328,345,348..349,352..353,356)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 msdyfssgaa apaatmlpat vyliavgafa lgmasyvtag lmpmiasafs vslamaaqlv
       61 taftlayglg splaiallpa raqragllta lavfvlanga salasgfssl lawramagig
      121 agvylalgia aaarvsapqq rgkaigvimg gmaggtvlgv plslllaqql gwtaalwlva
      181 ilgalalagl lwklpalptv samplrrkla lladgqvlai lmvsllaaia slgmytfiap
      241 llawsahgav isatpflwaw gvggivgsvl vgpwadkvaa pkltlfilll lvlalcalpl
      301 aagwsawlml apialwgaag walqvpqnqr llavrarqgd gnlaialnes alylgsaiaa
      361 ttggllllln wpmwllaaaa aavaiaalll qlpaarrs
//
LOCUS       WP_258000945             134 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Xanthomonas oryzae].
ACCESSION   WP_258000945
VERSION     WP_258000945.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas oryzae
  ORGANISM  Xanthomonas oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 134)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 134)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Xanthomonas oryzae"
                     /db_xref="taxon:347"
     Protein         1..>134
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          14..>134
                     /region_name="VgrG"
                     /note="Uncharacterized conserved protein VgrG, implicated
                     in type VI secretion and phage assembly [Intracellular
                     trafficking, secretion, and vesicular transport, Mobilome:
                     prophages, transposons, General function prediction only];
                     COG3501"
                     /db_xref="CDD:442724"
ORIGIN      
        1 mealnalmfq gallsdsgrl yrlqlpggdv qvverwsgse rlsggfewwv dvlstqaglp
       61 leawlgrrat lysrladgde sprtglihda yalgsdggla ryrvglvpwt wwlsqgrhsr
      121 vfqertlvqi veav
//
LOCUS       WP_258000959             471 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Xanthomonas oryzae].
ACCESSION   WP_258000959
VERSION     WP_258000959.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas oryzae
  ORGANISM  Xanthomonas oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 471)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Xanthomonas oryzae"
                     /db_xref="taxon:347"
     Protein         <1..471
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          28..69
                     /region_name="HAMP_N3"
                     /note="HAMP N-terminal domain 3; pfam18575"
                     /db_xref="CDD:465808"
     Region          <126..434
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(201..202,205..206,209,212..213,215..216,219,
                     222..223,226,229..230,233..234,237,240..241,243..244,248,
                     250..251,254,257..258,261..262,265,268,271..272,275,279,
                     282,289,293,296,299..300,303,306..307,310..311,313..314,
                     317..318,331..332,335,338..339,342,345..346,348..349,
                     352..353,356,359..360,363,366..367,369..370,373..374,
                     376..377,380,383..384,387,390..391)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            271..304
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 rmdagafpgd fgsmandtna lvashiklkm qtlhlierya igdlsedmpq lpgekgaita
       61 amnqvkqnla tmnteikqla qaaangdfta rgnaeqfqfd frvmveslnt lmatadgnlq
      121 slsgllqsia agdltarmgg qyqgvfaqmr ndanataeql asivgriqia adaiglasge
      181 iasgnqdlsq rteqqaanle etaasmeelt stvkqnaeha sqanqlaiga aavasqggdv
      241 vakvvttmsd iqgsskkiae iisvidgiaf qtnilalnaa veaarageqg rgfavvasev
      301 rtlaqrsaga akeikhlidd svekvthgat lvdqagttma eivasvqrvt nimgeissas
      361 qeqyagieqv nqtvtqmdet tqqnaalvee ataaaramee qaqqlteava vfkvaahapv
      421 arrlsaiasa psnarfapqp aarvtpaaaa prrsvgssaa shadsgnwqd f
//
LOCUS       WP_258000990              86 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein, partial [Xanthomonas
            oryzae].
ACCESSION   WP_258000990
VERSION     WP_258000990.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas oryzae
  ORGANISM  Xanthomonas oryzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024908.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13518.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Xanthomonas oryzae"
                     /db_xref="taxon:347"
     Protein         1..>86
                     /product="helix-turn-helix domain-containing protein"
     Region          33..>86
                     /region_name="transpos_IS630"
                     /note="IS630 family transposase; NF033545"
                     /db_xref="CDD:468076"
ORIGIN      
        1 mgrpakplvv saddrvqles marsqslpaa lsrsaqmilr madgepqtai ahrygvsrpt
       61 vtlwrtryre rgiaglhnel kpgrpr
//
LOCUS       WP_258000997             334 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar motor protein MotB [Janthinobacterium sp. ROICE36].
ACCESSION   WP_258000997
VERSION     WP_258000997.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. ROICE36
  ORGANISM  Janthinobacterium sp. ROICE36
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (residues 1 to 334)
  AUTHORS   Hosking,E.R., Vogt,C., Bakker,E.P. and Manson,M.D.
  TITLE     The Escherichia coli MotAB proton channel unplugged
  JOURNAL   J Mol Biol 364 (5), 921-937 (2006)
   PUBMED   17052729
REFERENCE   2  (residues 1 to 334)
  AUTHORS   Braun,T.F., Al-Mawsawi,L.Q., Kojima,S. and Blair,D.F.
  TITLE     Arrangement of core membrane segments in the MotA/MotB
            proton-channel complex of Escherichia coli
  JOURNAL   Biochemistry 43 (1), 35-45 (2004)
   PUBMED   14705929
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025057.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13677.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Janthinobacterium sp. ROICE36"
                     /db_xref="taxon:2048670"
     Protein         1..334
                     /product="flagellar motor protein MotB"
                     /calculated_mol_wt=36298
     Region          12..298
                     /region_name="PRK06778"
                     /note="hypothetical protein; Validated"
                     /db_xref="CDD:235860"
ORIGIN      
        1 mlkphekheq aiikragrkh dddghggawk vafadfclal lslflvlwlm aareqqamke
       61 immdasassr qgegqgvmpe qsggprgsli erfpmprkgs gdtrtegkqt qdgkagaapq
      121 nqtkvsyqsp edllslsral dklsdeaglk snlqsvitpy glrvmlhdtd kqgmfvrgsa
      181 vptdrfrkll rqmgpvfaqm dnqmlivght dslqyanngy egysnwtlsa nramsaraql
      241 ligsmspdsv lqvvgmaara pldvknasag inrriellil trgqadsiaa mfgmagqkaq
      301 geelqvgepd agtlqrlrek lglpakkerd ehan
//
LOCUS       WP_258001011             198 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Janthinobacterium sp. ROICE36].
ACCESSION   WP_258001011
VERSION     WP_258001011.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. ROICE36
  ORGANISM  Janthinobacterium sp. ROICE36
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14559.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Janthinobacterium sp. ROICE36"
                     /db_xref="taxon:2048670"
     Protein         1..198
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=20220
     Region          <35..>110
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          71..101
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mkpatmlpri aclasallla acatpeqlap rkpaaptlaq vmsdadaaar agqyeramtl
       61 lkgggssypa dkapwlqmaq mkfdrgqygd aighaleale rdpddkvahs ivavsglrls
      121 gkaladlsrq nnlngslrse aqdlakllra sigedvlvpp akrppaagkr aatsgsgtpa
      181 akgaaqqgsa adpfsglk
//
LOCUS       WP_258001029             315 aa            linear   BCT 02-MAR-2025
DEFINITION  BadF/BadG/BcrA/BcrD ATPase family protein [Janthinobacterium sp.
            ROICE36].
ACCESSION   WP_258001029
VERSION     WP_258001029.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. ROICE36
  ORGANISM  Janthinobacterium sp. ROICE36
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (residues 1 to 315)
  AUTHORS   Breese,K., Boll,M., Alt-Morbe,J., Schagger,H. and Fuchs,G.
  TITLE     Genes coding for the benzoyl-CoA pathway of anaerobic aromatic
            metabolism in the bacterium Thauera aromatica
  JOURNAL   Eur J Biochem 256 (1), 148-154 (1998)
   PUBMED   9746358
REFERENCE   2  (residues 1 to 315)
  AUTHORS   Egland,P.G., Pelletier,D.A., Dispensa,M., Gibson,J. and
            Harwood,C.S.
  TITLE     A cluster of bacterial genes for anaerobic benzene ring
            biodegradation
  JOURNAL   Proc Natl Acad Sci U S A 94 (12), 6484-6489 (1997)
   PUBMED   9177244
REFERENCE   3  (residues 1 to 315)
  AUTHORS   Bendrat,K., Muller,U., Klees,A.G. and Buckel,W.
  TITLE     Identification of the gene encoding the activator of
            (R)-2-hydroxyglutaryl-CoA dehydratase from Acidaminococcus
            fermentans by gene expression in Escherichia coli
  JOURNAL   FEBS Lett 329 (3), 329-331 (1993)
   PUBMED   8365476
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013986.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01869.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Janthinobacterium sp. ROICE36"
                     /db_xref="taxon:2048670"
     Protein         1..315
                     /product="BadF/BadG/BcrA/BcrD ATPase family protein"
                     /calculated_mol_wt=32099
     Region          16..273
                     /region_name="BadF"
                     /note="BadF-type ATPase, related to human
                     N-acetylglucosamine kinase [Carbohydrate transport and
                     metabolism]; COG2971"
                     /db_xref="CDD:442210"
ORIGIN      
        1 misistahha vpvlglgida ggtqtrwala tvdgaivadg aveglsalqm ssdagraavh
       61 atftrlcqav lavgqpcavv agltgfggdd valaqtlatl laldaahvsv gndidiayrd
      121 sfepgegylv yagtgsiaaw idvnggfhra ggrgvllddg gggywiarea lrhiwrrede
      181 apgswqsspm agavfaqlgg sdwslsrafm ygqdrgaigr lalavaasad adplaldilq
      241 ragqelarla laltarhgpr pvvlagraaq lhpaiaaamr aalpvslmme qkvarsheaa
      301 aklaartasl cagkd
//
LOCUS       WP_258001057             587 aa            linear   BCT 02-MAR-2025
DEFINITION  Card1-like endonuclease domain-containing protein [Pseudomonas
            aeruginosa].
ACCESSION   WP_258001057
VERSION     WP_258001057.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 587)
  AUTHORS   Rostol,J.T., Xie,W., Kuryavyi,V., Maguin,P., Kao,K., Froom,R.,
            Patel,D.J. and Marraffini,L.A.
  TITLE     The Card1 nuclease provides defence during type III CRISPR immunity
  JOURNAL   Nature 590 (7847), 624-629 (2021)
   PUBMED   33461211
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020571.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09002.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..587
                     /product="Card1-like endonuclease domain-containing
                     protein"
                     /calculated_mol_wt=66205
     Region          269..556
                     /region_name="PDDEXK_nuclease-like"
                     /note="PDDEXK family nucleases; cl40440"
                     /db_xref="CDD:477358"
ORIGIN      
        1 mkrflltwyg itdfraslgf entdgpiasa lagasysdii ilgytrtdnd aselieaqkt
       61 ftlelasirs mgqekdwklt nqfvsrfant svahehfeaw lkkkaaalgc narirlnsek
      121 lyqlndtegi yasamraldg veqepgeklv tlylspgtpv mafvwalaal sypelkkrli
      181 assiigkape vialpaewle rhsskqaair gisngfdvtf hlfgeqrmpa llsirqfesa
      241 hhifanskdf paacmqtfig srdlheltvd pwddravheq itelakqfpe ktriginltg
      301 gtklmfagal saarelgavp fyfdsknrrv ifidsvrrek irqidsietf lhlnsdglei
      361 agssfmkdis psrqlltetl wlhrdkvrrf yreltdynna frpfeicrdg fnfklddmea
      421 vsvqgygldl rfekwpdfak ylsggwfeef vylqckpyed agviqdlrin vklnlnlees
      481 kgyssfgvey nelditftdg yslyivecka gnvtqeqimk lqnlvrfygg iegrgivacc
      541 vlpntesvkk kikdarlmlw sgasfseqit ammnsitera easeatp
//
LOCUS       WP_258001084             215 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor plug domain-containing protein
            [Janthinobacterium sp. ROICE36].
ACCESSION   WP_258001084
VERSION     WP_258001084.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. ROICE36
  ORGANISM  Janthinobacterium sp. ROICE36
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (residues 1 to 215)
  AUTHORS   Oke,M., Sarra,R., Ghirlando,R., Farnaud,S., Gorringe,A.R.,
            Evans,R.W. and Buchanan,S.K.
  TITLE     The plug domain of a neisserial TonB-dependent transporter retains
            structural integrity in the absence of its transmembrane
            beta-barrel
  JOURNAL   FEBS Lett 564 (3), 294-300 (2004)
   PUBMED   15111112
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07715.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Janthinobacterium sp. ROICE36"
                     /db_xref="taxon:2048670"
     Protein         1..215
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /calculated_mol_wt=21772
     Region          40..>212
                     /region_name="TonB-Xanth-Caul"
                     /note="TonB-dependent receptor; TIGR01782"
                     /db_xref="CDD:273804"
ORIGIN      
        1 mhtsppsplr ltalalaima vfsgpshaqa qdadglpaat vvvsgqrasl rnaiaaqeka
       61 dnivsvissd digglpdkna aealarlpgv svqrdqgegr yitvrglgpd lnavtingal
      121 vpspeagrra valdilpagl irtlevsktl lpemdanslg atievkslsa fdlpgkllsa
      181 nvgashdekr arpapaaapc gpsassmasw awlpa
//
LOCUS       WP_258001090             106 aa            linear   BCT 02-MAR-2025
DEFINITION  GMC oxidoreductase, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258001090
VERSION     WP_258001090.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05199.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..106
                     /product="GMC oxidoreductase"
                     /GO_function="GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
     Region          <1..84
                     /region_name="BetA"
                     /note="Choline dehydrogenase or related flavoprotein
                     [Lipid transport and metabolism, General function
                     prediction only]; COG2303"
                     /db_xref="CDD:441878"
ORIGIN      
        1 vqsdaevdaf irsqaitlhh pvgtcrmgpd edpqavldnq mrvrgvralr vvdgsaipri
       61 irgptnalim mmaeraadfi tgkasprkqr passpltprq pagrlq
//
LOCUS       WP_258001129             414 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent monooxygenase [Janthinobacterium sp. ROICE36].
ACCESSION   WP_258001129
VERSION     WP_258001129.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. ROICE36
  ORGANISM  Janthinobacterium sp. ROICE36
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (residues 1 to 414)
  AUTHORS   Schreuder,H.A., van der Laan,J.M., Swarte,M.B., Kalk,K.H., Hol,W.G.
            and Drenth,J.
  TITLE     Crystal structure of the reduced form of p-hydroxybenzoate
            hydroxylase refined at 2.3 A resolution
  JOURNAL   Proteins 14 (2), 178-190 (1992)
   PUBMED   1409567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01494.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Janthinobacterium sp. ROICE36"
                     /db_xref="taxon:2048670"
     Protein         1..414
                     /product="FAD-dependent monooxygenase"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /calculated_mol_wt=43746
     Region          13..412
                     /region_name="PRK07608"
                     /note="UbiH/UbiF family hydroxylase"
                     /db_xref="CDD:181057"
ORIGIN      
        1 mnsptpptmr rfmhshsdvc ivgngaiakt talafaqagq svtllspvsp pastspsaak
       61 pveaswdvrv yalnhtaqel lsslkvwgal aadrvapvda mlvngdgaqa gglgfdayga
      121 hvgtlawive drnlgqalda alkfapnvsv lqglasrlew tsdsaivhld ggdsitcalv
      181 vgadgaqswv rgqcdigldy rsygqrgvvs nfacekphhg aahqwftgse givallplpg
      241 drvslvwsap daladtlmte sadtlaarla vycheklgkl tplqpelvra fpltlmrpha
      301 mvaprvalvg daahvvhpma ghgmnlgfad vaqlvktisd reahrgigde rvlaryarar
      361 kedvllmqla tdglarlfga dleplrvvrn lglnlldklp alkrkmiaha lghq
//
LOCUS       WP_258001196            2599 aa            linear   BCT 02-MAR-2025
DEFINITION  YDG domain-containing protein [Janthinobacterium sp. ROICE36].
ACCESSION   WP_258001196
VERSION     WP_258001196.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. ROICE36
  ORGANISM  Janthinobacterium sp. ROICE36
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037374.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18657.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2599
                     /organism="Janthinobacterium sp. ROICE36"
                     /db_xref="taxon:2048670"
     Protein         1..2599
                     /product="YDG domain-containing protein"
                     /calculated_mol_wt=251325
     Region          4..241
                     /region_name="TPS"
                     /note="TPS secretion domain; pfam05860"
                     /db_xref="CDD:461762"
     Region          204..>727
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          <427..545
                     /region_name="Peptidase_M26_N"
                     /note="M26 IgA1-specific Metallo-endopeptidase N-terminal
                     region; pfam05342"
                     /db_xref="CDD:461626"
     Region          683..2373
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          2421..2496
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
ORIGIN      
        1 magqatinga pgatvinqgs qnavinwanf ninkgesvqf vqpnrnaval nrvlgsdgtt
       61 ilgnlsangk vfivnpngvl fgqgasvnta glvastldis nsdfmsgkyq fsgngtgkvl
      121 nqgsinapgg yvallganvs negtiqarlg svalaagrai tldvagdgll nvavdqgavg
      181 alvknggmik adggsvvlta qaagdllktv vnntgvieaq tidtrggtik llgdmqtgtv
      241 naggtldasa pgggnggfvd tsaahvkida slkvttasak gmsgtwlidp tdfniavsgg
      301 dmtgtflsns lksgnvqiqs vsgaggtqgn invndnvnws ankltltaqn nininkamrg
      361 sgtaslaley gqsavaasnl atynvkaevd lpsgnnfstk lgsnggvtty qvinslgafn
      421 sstgsdvqgm qgnlsgnyvl gsnvdasvtg swdsgqgfvp igsagtpftg kfdglghely
      481 gltinradtp aamfgnigsa gmvrnlslsn vnitgsqamy gaaytdigal agynagtinn
      541 vsssgavhgs gyinmgalvg tnggtisnsr aagtvvaggf gaagglvgvn aaggliksss
      601 savaatstny fagglavynr gtisdsyatg avsvggtggs yggglaaint aggtvtnsya
      661 tgnvmgvsgl ggllgriesg gtvdnsyatg nvtgtgnnig gllgvssgvi snsyatgnvt
      721 gnstvggvvg snpsgaitnv yysgkltttg mnngaivgdh nggsivnayf dssqnpglta
      781 vgvvsngast iaqglsaaqm lqgsnfagfn ftttagaagn nwvivsgdgs ingasagtrp
      841 mlasewsnti hsthqlqlma mskaasytlg ssfsaastaa ngndvwgstg fipvgtagsa
      901 ftgsldgtgh ivfnlnivks gvagvglfgv vgsggvianv glsggtisgg dstgalvgtn
      961 ggsvsgsfat savtgvtnvg glvgtstgtl kdsyasgavt gssgagglvg snsgtvatsy
     1021 angsvsgagg glvgtgagsv tgsywdttas gkatsaggtn lttsglktls nytgagwdlg
     1081 qmwvaydgqs ahflrsfmqq ivvrasydsk vydgvayagg snsvtysntv agasllgtpa
     1141 ytgstvgavn agtygvsasg lyssggqsgy aisyidggll itqrqlslng agagnkvydg
     1201 nttaiisggt lagllagdlg nvnllsllgt yasknvgngi avnatatlgg saadnyilap
     1261 ltgvsgnitp atissisgil agskvydglt gaaldtsaav lagkigsdal tlsgtgtfdn
     1321 knagtgktvs isglflggad agnyilagtt gstladitak altitgvtts nrmydgtlna
     1381 alsggtlsgl vggetlglss lsgvfadknv gtgksvslsg atlidgtgla snytvsnpgt
     1441 ltadiskasi ssvtnitans kvydantkat inaggatfng mfsgdslsls attatfadkn
     1501 vgsgktvavs gialagtdag nynltlstgs gsgditpkal titgmsavnk vydgntkasl
     1561 sggsisglvg setlgvtgls asfsdknaga gktviasgst lvnggnggla snytisnptg
     1621 lsanitpkal tvtgmtagnk vydglldatl sggslsglvs getlllsgat gvfsdknags
     1681 nktivvsgss ladgtglasn ytvsnpttvk agitqkaltv sgvlasdkty dgntkaslsg
     1741 gtlnglvgge tlgltgqvgs fsdqnagmgk svtvsgatlv dgtglasnys vsnatgvtan
     1801 iaqkaltvsg vsasnrgydg tldavlsggt lsglvggetl glsslsgvfa dknvgagksv
     1861 tvsgatladg tglasnytvs npgtltadis kasissvtnv gvnnkiydgv ttatlngaat
     1921 fngkigndnl tlagngvfsd qnvatgkvvt vsgitlsgld agnyvlasna ssgtaditpk
     1981 altvagqvag nkvydgnvva qisggslvgl venetlaigg qtaafsdkna anakvvtvgg
     2041 ttlldgtgsa snytvvnptg ltasitpqal tvagqvagnk vydgnavaql lggslvglvg
     2101 getlaiagqt avfsdknaas aktvtvsgtt lldgsgaasn ytvvnptglt asitpkaltv
     2161 agqvagnkvy dgnavaqlsg gslvglvgne tlaiggqtaa fsdknaanak vvtvsgttll
     2221 dgtgsasnyt vvnptgltas itpasisaia givaankvyd ggtaarlnla gasfngmmag
     2281 dvlslgsgpv lgtfsdknaa lgksvaisgl slagadagny alassqastt atitpaaltv
     2341 sasgvnkvyd attnaavslr dnrigndqls iasngasfsd knagvgktvt vagislsgtd
     2401 agnyvvntsa sttatispaa ltvkvdnaek dqgrtnpdfs agysgllggd tvaaevsgnl
     2461 tfstpattas vagnylvsas gqasnnyaln yvegvlkikp tealqsavas viaavavaps
     2521 qgnmvqadmi vsgetapgkp aatqeapgeg ekgnagsapv vqlagnvvsn vlpglrlsvv
     2581 dsglrlptea ggnrrqdsq
//
LOCUS       WP_258001200            2519 aa            linear   BCT 02-MAR-2025
DEFINITION  YDG domain-containing protein [Janthinobacterium sp. ROICE36].
ACCESSION   WP_258001200
VERSION     WP_258001200.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. ROICE36
  ORGANISM  Janthinobacterium sp. ROICE36
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037374.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18657.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2519
                     /organism="Janthinobacterium sp. ROICE36"
                     /db_xref="taxon:2048670"
     Protein         1..2519
                     /product="YDG domain-containing protein"
                     /calculated_mol_wt=244940
     Region          4..241
                     /region_name="TPS"
                     /note="TPS secretion domain; pfam05860"
                     /db_xref="CDD:461762"
     Region          127..>653
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          536..2243
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          2255..2329
                     /region_name="YDG"
                     /note="YDG domain; pfam18657"
                     /db_xref="CDD:436651"
     Region          2345..2419
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
ORIGIN      
        1 magqatinga pgatvinqgs qnavinwanf ninkgesvqf vqpnsnaval nrvlgsdgtt
       61 ilgnlsangk vfivnpngvl fgqgasvnta glvastldin nadfmagkyq fsgngtgkvl
      121 nqgsisapgg yvallganvs negtiqarlg svalaagrai tldvagdgll nvavnagavg
      181 alvnnggmir aaggsvvlta qaagdllktv vnntgvieaq tidtrsgtik llgdmqsgtv
      241 naggtldasa peggkggfid tsaahvkidd alkvttassh gltgtwlidp tdytiaatgg
      301 dqtgafytna lkstsvqiqs isggtgvlgd invndtisws anqlkmtaqn nininqplrg
      361 sgtaslaley gqanvasgnl skynvkaeid lpsglnfstk lgsdgtatay tvinslgaat
      421 svggtdlqgl knalsgnfvl ganidatgta ntavwgangf tpigttatsf tgqfdglghv
      481 vtgltsgttt asasvglfgt isstaqvrni gllgvaitsn vpsgtygnvg slvgynnggt
      541 innayvgsgt ltspgivslg glvgknsgti snsynnatll vttnigsalg glvgkavags
      601 nisnsynsgt vtankynagg lvgnnlgsit nsfntgavta glgaggitsv ngsgsatgfi
      661 ansyntgaiv gigqvggvvg nnflkgdvsn systgsvtaa attgsnlryg glvgenrgti
      721 snsyatgavs gtgdvggvlg gsplggtitn vyssgavsli sggtgtpggv vgnmggtssi
      781 nggyfnatvn pisaigvtst sgttaavagl tatqmqtgsn fgaftfttat gqtgnnwvmv
      841 dndgrlnnag tvlgatgpml sseysttiys shqlqlmamn lagnytlgmd vnaagtgtgs
      901 dvwnggtfvp vgassgarft gtfdgaghvi sglvvnrpgt dyaglfgats staivrnvgl
      961 eggsitgrds tgalvgnnag lvsgnystas vtgstdvggl vgsnsgtvsn syasgtvsgs
     1021 tdvgglvgln sgtlsnnyat gavsgilnvg glvgvnsgsa sgnfwdattt gqatsatgtg
     1081 lttaqmklls tysgaawdla gawivydtnt ypllrafmtp lqvtfasnas ktydgtsswt
     1141 apgatfsnpn atlsgslnyg aagsavnagt yaitagglys gqrgyainsn aatltidrka
     1201 atvtggvvss rdydgttaat isgatisgll sqdngnvvvn tgtfdtkdag tgkavtaitt
     1261 gsaggnyivt atgltgtitp kalsvtglaa ttrqynklvs atvtggtlng lvtgetlnlg
     1321 assgtyldan agtnktltlt lgtvsdgtgl tsnysittpt nvtgtitpkv lswnnlavan
     1381 kvydgnetaa inkgsitglv pgemlavgpa aafadknagn aktvtvrttl gnggdgtlas
     1441 nytladttvl asitpkaltl tgvaagnkty dgtkaaamtg gtlggmisge tvtlgalsgt
     1501 fadqnagngi avtviggsls dgsnglasny tlggvtglsa nitqkaltvs gvsvaskiyd
     1561 gntkasisgg tlnglviget lslsgqsgaf ndkdasngka vtvtgatlad gtglasnytv
     1621 snatgvtgni tpkaltvsga saltrvydgs taatlaggvl dgllsgetlt lsglsgayat
     1681 ktagsgkavt vtgatladna gglasnytvs nptsvtgnvt kasissvsgl sasdktydgn
     1741 aaaviggkav itgmvlgddl afssasgafs dqnagtgktv nisgitltgn dlanydftnt
     1801 satatasiar kaltvigata adrvydgstv atisggsldg lvgketltlt smtglfadkn
     1861 vgtakavtvs gaaltggang glasnytvtd stgltanitk atistvsniv adnkvydgnt
     1921 katvsatgat fngmvsgdsl lfsatsalfn dknagsktvt vsgialggtd agnynltnts
     1981 gsgtgaitpk avtitgmsav nkvydgntka svtggsisgl vgtetlgvtg ltvtfddkna
     2041 gtgkavtatg ttlvnggngg lasnytmanp tgftanitpk altvtgmtag trvydgttaa
     2101 tlsggalsgl vsgetllvsg gsgvfadkna gngkagtvsg vgiadgsgla snysvsnptg
     2161 ltasitpkal tvagqlagnk vydgntaaql sggvlaglva getlgiagqt avfsdknaas
     2221 akavtvtgts lvdtasglas nytvsnptgl tasitpasll vratgaaprv ydtstnasvt
     2281 ladnriagdv lsisnggasf adknagankt vtvngialsg tdagnytvna tatttasitq
     2341 aalgvkvgna ekdygnvnpa ftasytgllg ndtlanevsg nlafstsati atpsgsylvs
     2401 aagqtstnya ltytpgvltv kptealqsav asviaavnva psqgnmvqad vvakgetvts
     2461 kedavqvale grqpqqgstp vvlttasvns nvlpglrlsv vdtglrlpva agntsienq
//
LOCUS       WP_258001220             324 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Janthinobacterium sp. ROICE36].
ACCESSION   WP_258001220
VERSION     WP_258001220.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. ROICE36
  ORGANISM  Janthinobacterium sp. ROICE36
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (residues 1 to 324)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 324)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019348.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07728.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Janthinobacterium sp. ROICE36"
                     /db_xref="taxon:2048670"
     Protein         1..324
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=36202
     Region          18..323
                     /region_name="PD_CobS"
                     /note="cobaltochelatase, CobS subunit; TIGR01650"
                     /db_xref="CDD:130711"
ORIGIN      
        1 msdsrqhppa aaaqtlqsvr slfhidsdll vpvfterdah vpdidpayrf nqdvtlaila
       61 gfshnrrvmv qglhgtgkst hieqvaarln wpcvrvnldg hisrldlvgk daivlreqqq
      121 vtefqegivp wslqrpvali fdeydagrpd vmfviqrile rdgkftlldq nrvitphphf
      181 rlfatsntvg lgnlngmyhg tqvlnhaqid rwnivatlny lpqaeetqiv larvpamnda
      241 agrqlassmv avasltrhgy aagdlaclms prtvitwaen cqifrdpala frlsflnkcd
      301 eaerpmvaey yqrcfneell atap
//
LOCUS       WP_258001246             833 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein [Vibrio
            vulnificus].
ACCESSION   WP_258001246
VERSION     WP_258001246.1
KEYWORDS    RefSeq.
SOURCE      Vibrio vulnificus
  ORGANISM  Vibrio vulnificus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 833)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Vibrio vulnificus"
                     /db_xref="taxon:672"
     Protein         1..833
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=94120
     Region          62..227
                     /region_name="HK_sensor"
                     /note="Sensor domains of Histidine Kinase receptors;
                     cl38916"
                     /db_xref="CDD:365792"
     Region          292..505
                     /region_name="PBP2_BvgS_HisK_like"
                     /note="The type 2 periplasmic ligand-binding protein
                     domain of the sensor-kinase BvgS and histidine kinase
                     receptors, and related proteins; cd01007"
                     /db_xref="CDD:270228"
     Region          556..>747
                     /region_name="HDGYP"
                     /note="HD-GYP domain, c-di-GMP phosphodiesterase class II
                     (or its inactivated variant) [Signal transduction
                     mechanisms]; COG2206"
                     /db_xref="CDD:441808"
ORIGIN      
        1 mkgslrqark fsirvtvgsm fliatmmtal vaislqyhfg kamsqeqvms kltlasgdvs
       61 dyvkdielsa snsarilksv amaterkftr qeiqslitev ltdnpmfysi yygkknedff
      121 qvinlnsspt irekmlaseq erwvvidirg vgekrvrttr yydseqnvtr itrepsryfp
      181 tqrpwygsal enrviktepy lfqhlkitgq tysirsahsv igidivlssv ashmtpqamg
      241 lsedqgisaf lfnrkgeiia esrqeqldeq rmpaispivl tanqkeaiav agvlkvsnql
      301 nwmpfdfsqa gepkgyavdl lkmiatmtgl qfeftngfss aelkqryhdg evdilnavfa
      361 seslngltsq plfylepava tlsreanqsg hsisdakarv gmvqgqifal qkssaetriy
      421 adlslaingl lkgevgsvvn syhslkqrke sslgrtiqle kipmaekvpv flyldqtqpe
      481 llevinkals eisevqkewl tqkwlnhyrd ysfvpysell elaaqpdlhg vmnvveigga
      541 shyvylmpin snqeflavvv pedvvmgqvt qqlwrslait iaammillpt swifgspivs
      601 pisdliaqtr kikqrhfdev vlvetrikev sqlsqammdm vaeikkhqka qeefveafiq
      661 liagaiddks pytaghcnrv pelglmlakv aeecqegkfk afkfknnaer refriaawlh
      721 dcgkittpeh vvdkgsklea nynriheirt rfevlwrdae ieylnrliar nvskaqadaq
      781 laqrreklqe efafiarcnv ggefmqqeai erieqiaaqt wlrhfdsskc lvl
//
LOCUS       WP_258001296             107 aa            linear   BCT 02-MAR-2025
DEFINITION  pyruvate kinase, partial [Vibrio vulnificus].
ACCESSION   WP_258001296
VERSION     WP_258001296.1
KEYWORDS    RefSeq.
SOURCE      Vibrio vulnificus
  ORGANISM  Vibrio vulnificus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 107)
  AUTHORS   Yuan,M., McNae,I.W., Chen,Y., Blackburn,E.A., Wear,M.A.,
            Michels,P.A.M., Fothergill-Gilmore,L.A., Hupp,T. and
            Walkinshaw,M.D.
  TITLE     An allostatic mechanism for M2 pyruvate kinase as an amino-acid
            sensor
  JOURNAL   Biochem J 475 (10), 1821-1837 (2018)
   PUBMED   29748232
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 107)
  AUTHORS   Munoz,M.E. and Ponce,E.
  TITLE     Pyruvate kinase: current status of regulatory and functional
            properties
  JOURNAL   Comp Biochem Physiol B Biochem Mol Biol 135 (2), 197-218 (2003)
   PUBMED   12798932
REFERENCE   3  (residues 1 to 107)
  AUTHORS   Valentini,G., Chiarelli,L.R., Fortin,R., Dolzan,M., Galizzi,A.,
            Abraham,D.J., Wang,C., Bianchi,P., Zanella,A. and Mattevi,A.
  TITLE     Structure and function of human erythrocyte pyruvate kinase.
            Molecular basis of nonspherocytic hemolytic anemia
  JOURNAL   J Biol Chem 277 (26), 23807-23814 (2002)
   PUBMED   11960989
REFERENCE   4  (residues 1 to 107)
  AUTHORS   Larsen,T.M., Benning,M.M., Wesenberg,G.E., Rayment,I. and Reed,G.H.
  TITLE     Ligand-induced domain movement in pyruvate kinase: structure of the
            enzyme from rabbit muscle with Mg2+, K+, and L-phospholactate at
            2.7 A resolution
  JOURNAL   Arch Biochem Biophys 345 (2), 199-206 (1997)
   PUBMED   9308890
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012449.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00224.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Vibrio vulnificus"
                     /db_xref="taxon:672"
     Protein         <1..>107
                     /product="pyruvate kinase"
                     /GO_function="GO:0000287 - magnesium ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0004743 - pyruvate kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0030955 - potassium ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006096 - glycolytic process [Evidence
                     IEA]"
     Region          <1..>107
                     /region_name="Pyruvate_Kinase"
                     /note="Pyruvate kinase (PK): Large allosteric enzyme that
                     regulates glycolysis through binding of the substrate,
                     phosphoenolpyruvate, and one or more allosteric effectors.
                     Like other allosteric enzymes, PK has a high substrate
                     affinity R state and a low...; cl39076"
                     /db_xref="CDD:453956"
ORIGIN      
        1 kgvnvpeavl qlspltdkdr rdlafglelg vdwvalsfvq rpedidearg ligdkaflma
       61 kiekpsavsa ieaiaerada imvargdlgv evpaesvpgi qkrivqv
//
LOCUS       WP_258001306              76 aa            linear   BCT 02-MAR-2025
DEFINITION  protein-disulfide reductase DsbD domain-containing protein, partial
            [Vibrio vulnificus].
ACCESSION   WP_258001306
VERSION     WP_258001306.1
KEYWORDS    RefSeq.
SOURCE      Vibrio vulnificus
  ORGANISM  Vibrio vulnificus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 76)
  AUTHORS   Bushweller,J.H.
  TITLE     Protein Disulfide Exchange by the Intramembrane Enzymes DsbB, DsbD,
            and CcdA
  JOURNAL   J Mol Biol 432 (18), 5091-5103 (2020)
   PUBMED   32305461
REFERENCE   2  (residues 1 to 76)
  AUTHORS   Smith,R.P., Whitten,A.E., Paxman,J.J., Kahler,C.M., Scanlon,M.J.
            and Heras,B.
  TITLE     Production, biophysical characterization and initial
            crystallization studies of the N- and C-terminal domains of DsbD,
            an essential enzyme in Neisseria meningitidis
  JOURNAL   Acta Crystallogr F Struct Biol Commun 74 (Pt 1), 31-38 (2018)
   PUBMED   29372905
REFERENCE   3  (residues 1 to 76)
  AUTHORS   Goulding,C.W., Sawaya,M.R., Parseghian,A., Lim,V., Eisenberg,D. and
            Missiakas,D.
  TITLE     Thiol-disulfide exchange in an immunoglobulin-like fold: structure
            of the N-terminal domain of DsbD
  JOURNAL   Biochemistry 41 (22), 6920-6927 (2002)
   PUBMED   12033924
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022853.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11412.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Vibrio vulnificus"
                     /db_xref="taxon:672"
     Protein         <1..>76
                     /product="protein-disulfide reductase DsbD
                     domain-containing protein"
     Region          1..>76
                     /region_name="dipZ"
                     /note="thiol:disulfide interchange protein precursor;
                     Provisional; PRK00293"
                     /db_xref="CDD:234717"
ORIGIN      
        1 aqpgddlfap rgatqtdflp vekafrftwe rlddgqvqlr wqiapgyyly qkrlrfdgld
       61 palqpqlppg eshsde
//
LOCUS       WP_258001311              73 aa            linear   BCT 02-MAR-2025
DEFINITION  lyase family protein, partial [Vibrio vulnificus].
ACCESSION   WP_258001311
VERSION     WP_258001311.1
KEYWORDS    RefSeq.
SOURCE      Vibrio vulnificus
  ORGANISM  Vibrio vulnificus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00206.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Vibrio vulnificus"
                     /db_xref="taxon:672"
     Protein         <1..>73
                     /product="lyase family protein"
     Region          <1..>72
                     /region_name="FumC"
                     /note="Fumarate hydratase class II [Energy production and
                     conversion]; COG0114"
                     /db_xref="CDD:439884"
ORIGIN      
        1 sarhaslvkt grthlmdatp itfgqelsaf vaqldyaera iraalpavyq laqggtavgt
       61 ginahprfae rfs
//
LOCUS       WP_258001313              71 aa            linear   BCT 02-MAR-2025
DEFINITION  Mur ligase domain-containing protein, partial [Vibrio vulnificus].
ACCESSION   WP_258001313
VERSION     WP_258001313.1
KEYWORDS    RefSeq.
SOURCE      Vibrio vulnificus
  ORGANISM  Vibrio vulnificus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 71)
  AUTHORS   Bertrand,J.A., Auger,G., Fanchon,E., Martin,L., Blanot,D., van
            Heijenoort,J. and Dideberg,O.
  TITLE     Crystal structure of UDP-N-acetylmuramoyl-L-alanine:D-glutamate
            ligase from Escherichia coli
  JOURNAL   EMBO J 16 (12), 3416-3425 (1997)
   PUBMED   9218784
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013396.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01225.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Vibrio vulnificus"
                     /db_xref="taxon:672"
     Protein         1..>71
                     /product="Mur ligase domain-containing protein"
                     /GO_function="GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          1..>71
                     /region_name="MurC"
                     /note="UDP-N-acetylmuramate-alanine ligase MurC and
                     related ligases, MurC/Mpl family [Cell
                     wall/membrane/envelope biogenesis]; COG0773"
                     /db_xref="CDD:440536"
ORIGIN      
        1 mrrirrihfv giggagmcgn aegllnlgye vsgsdlkasa vterlekfga qifighqaen
       61 adgadvlvvs s
//
LOCUS       WP_258001393              53 aa            linear   BCT 02-MAR-2025
DEFINITION  ribonucleotide-diphosphate reductase subunit beta [Fischerella
            thermalis].
ACCESSION   WP_258001393
VERSION     WP_258001393.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 53)
  AUTHORS   Nordlund,P. and Eklund,H.
  TITLE     Structure and function of the Escherichia coli ribonucleotide
            reductase protein R2
  JOURNAL   J Mol Biol 232 (1), 123-164 (1993)
   PUBMED   8331655
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012490.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00268.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..53
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..53
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /GO_process="GO:0009263 - deoxyribonucleotide biosynthetic
                     process [Evidence IEA]"
                     /calculated_mol_wt=6249
     Region          <4..>53
                     /region_name="Ferritin_like"
                     /note="Ferritin-like superfamily of diiron-containing
                     four-helix-bundle proteins; cl00264"
                     /db_xref="CDD:469698"
ORIGIN      
        1 mstfkkhips peielcmaeq ifqeamhnqs yqyiietvvp sdrrtqvydf wvn
//
LOCUS       WP_258001314              50 aa            linear   BCT 02-MAR-2025
DEFINITION  M48 family metalloprotease [Vibrio vulnificus].
ACCESSION   WP_258001314
VERSION     WP_258001314.1
KEYWORDS    RefSeq.
SOURCE      Vibrio vulnificus
  ORGANISM  Vibrio vulnificus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 50)
  AUTHORS   Quigley,A., Dong,Y.Y., Pike,A.C., Dong,L., Shrestha,L.,
            Berridge,G., Stansfeld,P.J., Sansom,M.S., Edwards,A.M., Bountra,C.,
            von Delft,F., Bullock,A.N., Burgess-Brown,N.A. and Carpenter,E.P.
  TITLE     The structural basis of ZMPSTE24-dependent laminopathies
  JOURNAL   Science 339 (6127), 1604-1607 (2013)
   PUBMED   23539603
REFERENCE   2  (residues 1 to 50)
  AUTHORS   Pryor,E.E. Jr., Horanyi,P.S., Clark,K.M., Fedoriw,N.,
            Connelly,S.M., Koszelak-Rosenblum,M., Zhu,G., Malkowski,M.G.,
            Wiener,M.C. and Dumont,M.E.
  TITLE     Structure of the integral membrane protein CAAX protease Ste24p
  JOURNAL   Science 339 (6127), 1600-1604 (2013)
   PUBMED   23539602
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013594.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01435.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..50
                     /organism="Vibrio vulnificus"
                     /db_xref="taxon:672"
     Protein         1..50
                     /product="M48 family metalloprotease"
                     /EC_number="3.4.24.-"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=5341
     Region          <2..>48
                     /region_name="COG4784"
                     /note="Putative Zn-dependent protease [General function
                     prediction only]"
                     /db_xref="CDD:443814"
ORIGIN      
        1 mnafalpggy iyihrgliay lgseaelaav lghevghvta rhsvrqqsyf
//
LOCUS       WP_258001406            1446 aa            linear   BCT 02-MAR-2025
DEFINITION  HAMP domain-containing protein, partial [Fischerella thermalis].
ACCESSION   WP_258001406
VERSION     WP_258001406.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 1446)
  AUTHORS   Aravind,L. and Ponting,C.P.
  TITLE     The cytoplasmic helical linker domain of receptor histidine kinase
            and methyl-accepting proteins is common to many prokaryotic
            signalling proteins
  JOURNAL   FEMS Microbiol Lett 176 (1), 111-116 (1999)
   PUBMED   10418137
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012876.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00672.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..1446
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         <1..>1446
                     /product="HAMP domain-containing protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          20..>420
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
     Region          304..>694
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
     Region          623..1222
                     /region_name="HAMP"
                     /note="HAMP domain [Signal transduction mechanisms];
                     COG2770"
                     /db_xref="CDD:442051"
     Region          938..1077
                     /region_name="GAF_2"
                     /note="GAF domain; pfam13185"
                     /db_xref="CDD:433019"
     Region          1074..1419
                     /region_name="BaeS"
                     /note="Signal transduction histidine kinase [Signal
                     transduction mechanisms]; COG0642"
                     /db_xref="CDD:440407"
ORIGIN      
        1 varevgaegk lggqaqvpgv agtwkdltds vnfmagslta qvrniadvtt avangdlskk
       61 itvdvkgeil elkntintmv dqlnsfasev trvarevgte gklgvqaevr gvagtwkdlt
      121 dsvnmmagnl tgqvrniaev ataiangdls kkitvdvkge ilelkntini mvdqlgsfas
      181 evtrvarevg segklgvqad vrgvagtwkd ltdsvnfmag sltaqvrnia evttavangd
      241 lskkitvdvr geilelknti ntmvdqlnsf agevtrvare vgaegklgvq aevkgvagtw
      301 kdltdsvnfm agsltaqvrn iaevttavan gdlskkitvd vrgeilelkn tintmvdqls
      361 sfasevtrva revgtegklg vqaevkgvag twkdltgavn mmagnltdqv rniaevatai
      421 angdlskkit vqvkgeifel kntinimvdq lnsfasevtr varevgsegk lgvqadvkgv
      481 agtwkdltds vnfmagslta qvrniaavtt avangdlskk itvdvkgeil elkdtintmv
      541 dqlnsfasev trvarevgte gklgvqaevq gvagtwkdlt dsvnsmagsl tsqvrniaev
      601 ttavangdls kkitvdvkge ilelkntint mvdqlnsfas evtrvarevg tegklgvqay
      661 vrgvagtwkd ltdnvnlmag nltaqvrnia evtkavangd lskkitvdvr geifelknti
      721 nvmvdqlssf asevtrvare vgtegklggq aqvqgvagtw kdltdnvnsm asnltaqvrg
      781 iakvvtavan gdlkrklmld akgeiealae tinemidtla tfanqvttva revgiegklg
      841 gqakvpgaag twkdltdnvn elaatlttql raiaevatav tkgdltrsia vealgevail
      901 kdninqmian lrettqknte qdwlktnlak ftrmlqgqrd letvsklilr elaplvgaah
      961 gvfyimentg nnqylkllss yayrerkhla nrfhlgeglv gqcalekeri lltevphdyi
     1021 kissglgeat pvnvvvlpvl fegqvtavie lasfrrfsei hltffdqlte siaivlntia
     1081 asmrteellk qsqslaeelq sqqnelretn krleqqaqtl kasedllkkq qeelqktnae
     1141 leekaellav qnkeverknh eieqarlsle ekaeqlalss kykseflanm shelrtplns
     1201 llilakllad niegnlsekq ieysrtiysa gndllslind ildlakiesg tmsidmdqlr
     1261 ltdlreqver tfrqvavdkr lnftieldse lpqtiytdak rlqqilknll anafkfterg
     1321 evslrvfvak qgwssdhekl nradrviafa vrdtgigiap ekqkiifeaf qqadgttsrk
     1381 fggtglglsi sreitrlfgg eiklvsrpge gstftlylpq plsgagemgr lgdgeigrkt
     1441 sphhpt
//
LOCUS       WP_258001410              72 aa            linear   BCT 02-MAR-2025
DEFINITION  His/Gly/Thr/Pro-type tRNA ligase C-terminal domain-containing
            protein [Fischerella thermalis].
ACCESSION   WP_258001410
VERSION     WP_258001410.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 72)
  AUTHORS   Wolf,Y.I., Aravind,L., Grishin,N.V. and Koonin,E.V.
  TITLE     Evolution of aminoacyl-tRNA synthetases--analysis of unique domain
            architectures and phylogenetic trees reveals a complex history of
            horizontal gene transfer events
  JOURNAL   Genome Res 9 (8), 689-710 (1999)
   PUBMED   10447505
REFERENCE   2  (residues 1 to 72)
  AUTHORS   Aberg,A., Yaremchuk,A., Tukalo,M., Rasmussen,B. and Cusack,S.
  TITLE     Crystal structure analysis of the activation of histidine by
            Thermus thermophilus histidyl-tRNA synthetase
  JOURNAL   Biochemistry 36 (11), 3084-3094 (1997)
   PUBMED   9115984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015113.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03129.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..72
                     /product="His/Gly/Thr/Pro-type tRNA ligase C-terminal
                     domain-containing protein"
                     /calculated_mol_wt=8005
     Region          <11..67
                     /region_name="ThrS"
                     /note="Threonyl-tRNA synthetase [Translation, ribosomal
                     structure and biogenesis]; COG0441"
                     /db_xref="CDD:440210"
ORIGIN      
        1 mqietqplhv sdrtiakkir elsarkipli vvvgekeain qslnlrrlgi vgqeeiqlae
       61 leaelvnlrn pi
//
LOCUS       WP_258001553             733 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Fischerella thermalis].
ACCESSION   WP_258001553
VERSION     WP_258001553.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 733)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 733)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 733)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 733)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..733
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..733
                     /product="ATP-binding protein"
                     /calculated_mol_wt=82022
     Region          10..>282
                     /region_name="CHASE3"
                     /note="Extracytoplasmic sensor domain CHASE3 (specificity
                     unknown) [Signal transduction mechanisms]; COG5278"
                     /db_xref="CDD:444089"
     Region          231..490
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          <419..715
                     /region_name="WalK"
                     /note="Sensor histidine kinase WalK [Signal transduction
                     mechanisms]; COG5002"
                     /db_xref="CDD:444026"
ORIGIN      
        1 msedrfhlqk rlvnagllva illlgstgvv aflnarewqt tqkrvqhtyd illtlerakt
       61 nlngtakarr gywlsqdvep dsklflqdyq tsvqqtqqal aqlqqltadn ptqqthlqti
      121 nilwqqyqal hqsqvepsat enqskaqpss viqtpdrsls gaehyrlqqq ifallnqmaa
      181 teqqlleqrt aatdrltgit nhilaitysl slvslatiyv llrreagkrq qaeanlrrse
      241 hkfqsvfdel yefaglltpd gilievnqap lafaqvtred vlgnpfwefp lwqqsselte
      301 iaktavsqaa agrffytevt fnsptgqpht fdvsvkpiyq sqsqqviwli aegrdittqv
      361 rlrdalrqer nrslqlinss vdgiaafdeq gtctvwnpam evltgiprdr aigqcgmdlf
      421 rsllpdsilq plhlgmadtv tafdfshshp qtgqlrmiea rysplhnggt tvtgglmvlr
      481 dvtrqreler lkrefisiis heirtplssi rgalglvaeg ildddpqtar emlsiannni
      541 erlvrlvndi lalnrlesgq vdlkyqwcpa islvqqafss vetlatthqi rleatvpddl
      601 qvwadpdwlv qvlvnlvnna ikfsppqtai avtaeaiase siiqfsvadq grgipadklq
      661 tifgrfqqvd asdsrqkggt glglaicrqi vqqhggriwv eselnkgstf yftlphpeqr
      721 qeaerkqttq kll
//
LOCUS       WP_258001574             598 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1565 domain-containing protein [Fischerella thermalis].
ACCESSION   WP_258001574
VERSION     WP_258001574.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019236.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07602.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..598
                     /product="DUF1565 domain-containing protein"
                     /calculated_mol_wt=62759
     Region          46..302
                     /region_name="DUF1565"
                     /note="Protein of unknown function (DUF1565); cl23857"
                     /db_xref="CDD:305014"
     Region          <320..514
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
ORIGIN      
        1 mgvaslmlln cyfdtaiaqt psqttisqvn alfvnpstgd dkqgnggest pfktitqalr
       61 vatpntvikl akgtystatg eifplilkag vslqgngssk grgiiisggd dylsrnfgsk
      121 nvavvsakga tltgvtvtns npggyglwie ssnftvtent ftgntqdgvt vigntapiir
      181 nnffyrnsan gitvtdasra eirdnvfqet gfginiaqka qpvvvnnqit nnrsgiivqa
      241 ssrpilrknv iegnredglv vlgqaqpdlg ntseaggnqf rnnarydina saakqiiaay
      301 gnviagdriv gtvntggtia atensssaai aknstqqtqv tqeitfsaps vstntitstg
      361 klppppavvs sstnnaakpl nsqllplqpa nttskvvvtv tqpkqparpv tsgvvtnspk
      421 pkplplrnaa gfpipssltp kqtvagwqqq astpqvnyvq mttntiefva pqpqppinpv
      481 tptpvttatn qiqtlpvlqp ppissnisvg nqlpvsenst ttayaggaig mryrvitevq
      541 tqkdqelvrf lapgafptfw qgravmqagv fsnrynaeqm stilnnnglr tiiepigy
//
LOCUS       WP_258001730             275 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Mesotoga sp. Brook.08.YT.4.2.5.1].
ACCESSION   WP_258001730
VERSION     WP_258001730.1
KEYWORDS    RefSeq.
SOURCE      Mesotoga sp. Brook.08.YT.4.2.5.1
  ORGANISM  Mesotoga sp. Brook.08.YT.4.2.5.1
            Bacteria; Thermotogati; Thermotogota; Thermotogae; Kosmotogales;
            Kosmotogaceae; Mesotoga.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Mesotoga sp. Brook.08.YT.4.2.5.1"
                     /db_xref="taxon:1421001"
     Protein         1..275
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=29631
     Region          5..>271
                     /region_name="2A0121"
                     /note="H+ Antiporter protein; TIGR00900"
                     /db_xref="CDD:162098"
ORIGIN      
        1 mgrnfwlfsv grlvsligsg vqalaiplyi ldltgsgaim gtfavitmip riifgpiagv
       61 vgdrfnrkli miymdfarga ailamayman aetltisilf ifqllistld isfdpataam
      121 lpdiieedkl lrgnsilgav nsisyivgpa lggvlyglfg ievvfilngv sfvasaisei
      181 fivyeqttek srvsvksvfv divegisylr rikglmmvli famvsnflla pvftvvfpff
      241 artvvgfssq qygflqsgwv vgvlignill gdcsf
//
LOCUS       WP_258001731             129 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Mesotoga sp. Brook.08.YT.4.2.5.1].
ACCESSION   WP_258001731
VERSION     WP_258001731.1
KEYWORDS    RefSeq.
SOURCE      Mesotoga sp. Brook.08.YT.4.2.5.1
  ORGANISM  Mesotoga sp. Brook.08.YT.4.2.5.1
            Bacteria; Thermotogati; Thermotogota; Thermotogae; Kosmotogales;
            Kosmotogaceae; Mesotoga.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Mesotoga sp. Brook.08.YT.4.2.5.1"
                     /db_xref="taxon:1421001"
     Protein         1..129
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=14024
     Region          <4..98
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mnlfggaswl yfaalgvpil vmgvfnafvn tplqtlfhri vptsyrsrvf svisilsqia
       61 tplgsaifgf avdrfpvhyl vllscignai ltivflmkgm srlfeekrtd nsngskrkav
      121 epvregiga
//
LOCUS       WP_258001742             902 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Mesotoga sp. Brook.08.YT.4.2.5.1].
ACCESSION   WP_258001742
VERSION     WP_258001742.1
KEYWORDS    RefSeq.
SOURCE      Mesotoga sp. Brook.08.YT.4.2.5.1
  ORGANISM  Mesotoga sp. Brook.08.YT.4.2.5.1
            Bacteria; Thermotogati; Thermotogota; Thermotogae; Kosmotogales;
            Kosmotogaceae; Mesotoga.
REFERENCE   1  (residues 1 to 902)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 902)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 902)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 902)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..902
                     /organism="Mesotoga sp. Brook.08.YT.4.2.5.1"
                     /db_xref="taxon:1421001"
     Protein         1..902
                     /product="ATP-binding protein"
                     /calculated_mol_wt=103021
     Region          <137..670
                     /region_name="GAF"
                     /note="GAF domain [Signal transduction mechanisms];
                     COG2203"
                     /db_xref="CDD:441805"
     Region          524..888
                     /region_name="NtrY"
                     /note="Signal transduction histidine kinase NtrY involved
                     in nitrogen fixation and metabolism regulation [Signal
                     transduction mechanisms]; COG5000"
                     /db_xref="CDD:444024"
ORIGIN      
        1 mielrgtgfe tssdeiiqri lkrialeiss epslfileky rdvfkevnfr egftrtgrei
       61 glnknpflre lnkadvfeke ivlsthleeh kekvkfiglf cegeplgllt fptkskvkgs
      121 lgswikelem alhysikrsl eeesyrrlkl vsrltsvlet etdseelvyr sleiaremlr
      181 vrwifflerl dtsfhlraai gegtsplrgi emsisdeqld alsrerlfvs akksdlssvi
      241 fteevsvgsf iavpllvegm vvglivaadr eevegefray khldredlkm lddmsrrmav
      301 aisrlrltsr lemevrklrq lgkkheelis eqkeqlfkls vlhkiteamk rsldreriir
      361 illmgathss glkfdraiff rvdnarsvlv eeskmlsksr ensdrsvysd larylqdvsf
      421 eessndenes ralisypgni ilervvlrkk ivhvtpemlr lrgeelalln riigsdeyli
      481 vpvsgeeevl giliidnsds gkrisnadte ilglladstg valeltenye rivqmaesle
      541 keknlsnyyr rfvssilqsl esaiivcsve gkitevnrta eflldvnrnd iigksiqsmn
      601 lkldgiiell fdamrigeti tltdqhfnaf gdkyfdvqit plreerrkkl tgvilsldei
      661 trrrkleqel ksreklaalg emsakvahei rnpitiiggf vkrilassdr ektreyakil
      721 meelrrldsi vgevleasrr rsvttdekfd lvsitreila gfeekavqes vklvlysrkd
      781 eieyygnkdr ikqviinlvq naieasesdg evritiqeed dsinfsvwng grtipeetlk
      841 rifepffttk tfgtglglsi ckkiveehgg eisassgsgg tnftfrlptr rvgrfdlekk
      901 ec
//
LOCUS       WP_258001753             377 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Mesotoga sp.
            Brook.08.YT.4.2.5.1].
ACCESSION   WP_258001753
VERSION     WP_258001753.1
KEYWORDS    RefSeq.
SOURCE      Mesotoga sp. Brook.08.YT.4.2.5.1
  ORGANISM  Mesotoga sp. Brook.08.YT.4.2.5.1
            Bacteria; Thermotogati; Thermotogota; Thermotogae; Kosmotogales;
            Kosmotogaceae; Mesotoga.
REFERENCE   1  (residues 1 to 377)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 377)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 377)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 377)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Mesotoga sp. Brook.08.YT.4.2.5.1"
                     /db_xref="taxon:1421001"
     Protein         1..377
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=41361
     Region          3..>264
                     /region_name="MglA"
                     /note="ABC-type sugar transport system, ATPase component
                     [Carbohydrate transport and metabolism]; COG1129"
                     /db_xref="CDD:440745"
ORIGIN      
        1 mrvieargie ksyggkkvlk avdldldsgq ltvlgglngs gkstiikils gdispdngei
       61 vfdgkrvelr sivdarhigi savyqeymlv pdltiaenif lgsgkfsisr kkmnqessrl
      121 lkevgleyep sakvsslsad dqsllefaia afseprvlli ddlfsvlnsp ykerllkmin
      181 dvknrgasvl vatpdpeimq kadrlffien stvvdlpvpl drgeilrrig asndrsippf
      241 egeplieign vagtgkdlei srgelihvfc gsseiirelt raitrqdpfs enavpifrea
      301 ksfferfgsr gpssdaekyf satlknsglv sqvmlkkars fistkklrrs yilnkesvvs
      361 vksflaglee idalpes
//
LOCUS       WP_258001823             117 aa            linear   BCT 02-MAR-2025
DEFINITION  S41 family peptidase [Mesotoga sp. Brook.08.YT.4.2.5.1].
ACCESSION   WP_258001823
VERSION     WP_258001823.1
KEYWORDS    RefSeq.
SOURCE      Mesotoga sp. Brook.08.YT.4.2.5.1
  ORGANISM  Mesotoga sp. Brook.08.YT.4.2.5.1
            Bacteria; Thermotogati; Thermotogota; Thermotogae; Kosmotogales;
            Kosmotogaceae; Mesotoga.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015531.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03572.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Mesotoga sp. Brook.08.YT.4.2.5.1"
                     /db_xref="taxon:1421001"
     Protein         1..117
                     /product="S41 family peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=13048
     Region          <10..88
                     /region_name="Peptidase_S41"
                     /note="C-terminal processing peptidase family S41;
                     cl02526"
                     /db_xref="CDD:470603"
     Site            23
                     /site_type="active"
                     /note="Active site serine [active]"
                     /db_xref="CDD:143475"
ORIGIN      
        1 mmidwrlnrt gklfvlvdrg tfssavlnai smrkrtnaif vgeptggspr hygevekfql
       61 pnsgisvscs ttywkttsdt seafmpdila vrsfqdyyem rdlafeavma fgwegeg
//
LOCUS       WP_258001845             269 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Mesotoga sp.
            Brook.08.YT.4.2.5.1].
ACCESSION   WP_258001845
VERSION     WP_258001845.1
KEYWORDS    RefSeq.
SOURCE      Mesotoga sp. Brook.08.YT.4.2.5.1
  ORGANISM  Mesotoga sp. Brook.08.YT.4.2.5.1
            Bacteria; Thermotogati; Thermotogota; Thermotogae; Kosmotogales;
            Kosmotogaceae; Mesotoga.
REFERENCE   1  (residues 1 to 269)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Mesotoga sp. Brook.08.YT.4.2.5.1"
                     /db_xref="taxon:1421001"
     Protein         1..269
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=29732
     Region          <1..261
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mhacghdvhm tiliglieri vtcdlnrnfl flfqpaeegg ggaakclskl eqyeiteawa
       61 lhvndefpeg svytragvlf asafetdctf kgrsahvafy kqgrdaiega mdflqrvysv
      121 drgdsvlrfg liqggrvrnv vadsctlsgt vrtkafelse eaimeleelg revaterglk
      181 fsqeigskyp qvhvdgdlyd klcalvdvnp vemkyvgedf gviamkypsl lfwlgtgrge
      241 hhglhnsrfl padsviekgv eifwkvakg
//
LOCUS       WP_258001853             438 aa            linear   BCT 02-MAR-2025
DEFINITION  site-2 protease family protein [Mesotoga sp. Brook.08.YT.4.2.5.1].
ACCESSION   WP_258001853
VERSION     WP_258001853.1
KEYWORDS    RefSeq.
SOURCE      Mesotoga sp. Brook.08.YT.4.2.5.1
  ORGANISM  Mesotoga sp. Brook.08.YT.4.2.5.1
            Bacteria; Thermotogati; Thermotogota; Thermotogae; Kosmotogales;
            Kosmotogaceae; Mesotoga.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014244.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02163.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Mesotoga sp. Brook.08.YT.4.2.5.1"
                     /db_xref="taxon:1421001"
     Protein         1..438
                     /product="site-2 protease family protein"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=47545
     Region          2..438
                     /region_name="RseP"
                     /note="Membrane-associated protease RseP, regulator of
                     RpoE activity [Posttranslational modification, protein
                     turnover, chaperones, Transcription]; COG0750"
                     /db_xref="CDD:440513"
     Region          <62..225
                     /region_name="degP_htrA_DO"
                     /note="periplasmic serine protease, Do/DeqQ family;
                     TIGR02037"
                     /db_xref="CDD:273938"
ORIGIN      
        1 mrpagedlda idssvpdneq iqnkpawqrf iiyfagpafs lllgflilsl vavvwgfqev
       61 kidkvelgsp aalsgmlpgd riasvngktl ldntrlseav vrgekidlvv iregreveit
      121 lipemlpqea fivignvsge fgdalssing asfngdyvgy ggilspesti rlgfadgsnl
      181 sgtlltyspa eeryamgiyy anfkpivatd fgqfrkgdvl vsvngmttet sydlttmsql
      241 lslkpnelli qftgrettfa rygfpeefvv tlerdgqvvd ltmtknemia lvsevgafsq
      301 gsdywypdsp veaavlgvqw andllitmvk vvgslftgga nineftgpig lvtivdqavs
      361 lgtrivlfla gfislnlgvi nmipfpaldg grmllallei itrkrldpki eglinvigfm
      421 ilmgfmiyit fidigrwl
//
LOCUS       WP_258002051             556 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: penicillin-binding transpeptidase domain-containing
            protein [unclassified Mesotoga].
ACCESSION   WP_258002051
VERSION     WP_258002051.1
KEYWORDS    RefSeq.
SOURCE      unclassified Mesotoga
  ORGANISM  unclassified Mesotoga
            Bacteria; Thermotogati; Thermotogota; Thermotogae; Kosmotogales;
            Kosmotogaceae; Mesotoga.
REFERENCE   1  (residues 1 to 556)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="unclassified Mesotoga"
                     /db_xref="taxon:1184398"
     Protein         1..556
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /calculated_mol_wt=61947
     Region          20..550
                     /region_name="pbp2_mrdA"
                     /note="penicillin-binding protein 2; TIGR03423"
                     /db_xref="CDD:274573"
ORIGIN      
        1 mktksarrfd lffvlfllvm glfvyklydy qivnqekyak qvesisrrsi silpprgmii
       61 drngiplawd apyyritkkv vflpedlkrm mvdasenrek meklirrlev fgsvetvlpa
      121 svaerlndfp elevseriir hyqdnpgish vvgyiksdge pvmgiekqyn ellrgtpgeq
      181 lirvdalgrq islegeippl pgddlkitid skmseyiynl inetgktgaa avmktdgevl
      241 alvsvpsfes mffttgisnr dwdrlnldps rplvnralsp fspgsaikpf iamvalaegk
      301 dstkeidcgg vfqykdsrgv vqgvyrdwnl yghgktdlak aitvscnvyf yqlglelgin
      361 tinryaelwe vfrptgidlp eesvgmmpsp twkrerlees wfpgdtiqis igqgylsitp
      421 lqlakltgei atrgieiipf igskkessre ainlkdsdwd llinamgevi skggsaadag
      481 taysafrgfe etaagktgta eqggskpahs wftgfmplhe peivvtvfvh eggygsglas
      541 qisrkimdyy vteyar
//
LOCUS       WP_258002074             297 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Mesotoga sp. Brook.08.YT.4.2.5.1].
ACCESSION   WP_258002074
VERSION     WP_258002074.1
KEYWORDS    RefSeq.
SOURCE      Mesotoga sp. Brook.08.YT.4.2.5.1
  ORGANISM  Mesotoga sp. Brook.08.YT.4.2.5.1
            Bacteria; Thermotogati; Thermotogota; Thermotogae; Kosmotogales;
            Kosmotogaceae; Mesotoga.
REFERENCE   1  (residues 1 to 297)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 297)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Mesotoga sp. Brook.08.YT.4.2.5.1"
                     /db_xref="taxon:1421001"
     Protein         1..297
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=33915
     Region          <13..275
                     /region_name="MalY"
                     /note="Bifunctional PLP-dependent enzyme with
                     beta-cystathionase and maltose regulon repressor
                     activities [Amino acid transport and metabolism, General
                     function prediction only]; COG1168"
                     /db_xref="CDD:440782"
ORIGIN      
        1 mhrrgrrryr tapvynryeq avrrtnreiv snpliykdgk ysmdfddler cmkvgknrlf
       61 vlcnphnpia kvwrpsdlei isslaqrynv lvfsdeifge itfngnsaip yakvagngsh
      121 sivatslgkv fnftgvnnan miipdsetrd kfrvqrdadh ygsidpltha avcagygpkg
      181 sdwvremkky vaeninmirn ffrsnipdvr vsevegsfvi widwrglrld ddelqsflln
      241 eayldldrgi nygiggkgft rmnvaaprgk ieeslgylfd aaarrgyals etynrwr
//
LOCUS       WP_258002106             158 aa            linear   BCT 02-MAR-2025
DEFINITION  alginate lyase family protein [Burkholderia sp. MSMB175].
ACCESSION   WP_258002106
VERSION     WP_258002106.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. MSMB175
  ORGANISM  Burkholderia sp. MSMB175
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (residues 1 to 158)
  AUTHORS   Yoon,H.J., Mikami,B., Hashimoto,W. and Murata,K.
  TITLE     Crystal structure of alginate lyase A1-III from Sphingomonas
            species A1 at 1.78 A resolution
  JOURNAL   J Mol Biol 290 (2), 505-514 (1999)
   PUBMED   10390348
REFERENCE   2  (residues 1 to 158)
  AUTHORS   Ertesvag,H., Erlien,F., Skjak-Braek,G., Rehm,B.H. and Valla,S.
  TITLE     Biochemical properties and substrate specificities of a
            recombinantly produced Azotobacter vinelandii alginate lyase
  JOURNAL   J Bacteriol 180 (15), 3779-3784 (1998)
   PUBMED   9683471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017263.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05426.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Burkholderia sp. MSMB175"
                     /db_xref="taxon:1086510"
     Protein         1..158
                     /product="alginate lyase family protein"
                     /GO_component="GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /GO_function="GO:0016829 - lyase activity [Evidence IEA]"
                     /calculated_mol_wt=17798
     Region          <27..154
                     /region_name="AlgLyase"
                     /note="Alginate Lyase A1-III; enzymatically depolymerizes
                     alginate, a complex copolymer of beta-D-mannuronate and
                     alpha-L-guluronate, by cleaving the beta-(1,4) glycosidic
                     bond; cl00179"
                     /db_xref="CDD:444729"
ORIGIN      
        1 mirsppkrii evfpiffgsd wssgpdirdi gpdgalarev krgnhalhyh tfaliplvfa
       61 aelarrrnid lyrenggaig rpanpvidiv entasftkit pikqdlfpwt lhdelcwvep
      121 yyarfrdsrl paiiaprrpf sewrvggnvt avwgvplp
//
LOCUS       WP_258002148             467 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Burkholderia sp. WAC0059].
ACCESSION   WP_258002148
VERSION     WP_258002148.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. WAC0059
  ORGANISM  Burkholderia sp. WAC0059
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Burkholderia sp. WAC0059"
                     /db_xref="taxon:2066022"
     Protein         1..467
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=48904
     Region          13..466
                     /region_name="PRK10504"
                     /note="putative transporter; Provisional"
                     /db_xref="CDD:182502"
ORIGIN      
        1 mksnnnfrit aavvasalfm qnidgtavat alpsmardlh vnpvhlssai tsylvaltvf
       61 ipvsgwiadr fgakrvfmsa iatftvasvl calshglsgl iaarilqglg gammvpvgrl
      121 ilfrrvrree llsattwltm palagpllgp plggfltdal swrsvfwinv pvgvagmllc
      181 arflgpsdae rprapdlsgm vmiglaltal mvgvetlgrg vlppevplvg iaaglalfwl
      241 tvrhcrrieh paiefpllki ptfhaatiag sffrsgagam pflipitlqv gfgfsasksg
      301 lislasalgt fcmrpmtrfa lrwlsvrtvl iggsisfaam lavcamisps wsdtaifall
      361 lvgglsrslc fasmgalafa dvpqeklsaa tsfqgtaqql tkavgvaiaa gslqltmlls
      421 grthashfdf scaffvmavv vlaswpmfaa lpadagegis dakrraa
//
LOCUS       WP_258002184             397 aa            linear   BCT 02-MAR-2025
DEFINITION  polysaccharide biosynthesis/export family protein [Burkholderia sp.
            WAC0059].
ACCESSION   WP_258002184
VERSION     WP_258002184.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. WAC0059
  ORGANISM  Burkholderia sp. WAC0059
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (residues 1 to 397)
  AUTHORS   Stevenson,G., Andrianopoulos,K., Hobbs,M. and Reeves,P.R.
  TITLE     Organization of the Escherichia coli K-12 gene cluster responsible
            for production of the extracellular polysaccharide colanic acid
  JOURNAL   J Bacteriol 178 (16), 4885-4893 (1996)
   PUBMED   8759852
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014606.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02563.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Burkholderia sp. WAC0059"
                     /db_xref="taxon:2066022"
     Protein         1..397
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0015774 - polysaccharide transport
                     [Evidence IEA]"
                     /calculated_mol_wt=41338
     Region          <106..385
                     /region_name="PRK15078"
                     /note="polysaccharide export protein Wza; Provisional"
                     /db_xref="CDD:237903"
ORIGIN      
        1 mfdgqarsgr fpawiaalfs avliggcais pgmtytpqsr aaiagaaapg sapaagagah
       61 gtagggipas ddlveinadl iakeraarpq gmpadvtqlf ekpspytlgp gdilsivvwd
      121 hpelnlpdtt tgaaqdpsgs nsvvsgytvd aggeiqfayv gplklaglte mqardllaqk
      181 lslylrapqv tlrivayrsr rvyvdgevrt pgllvlddmt mtlpeainra ggftalgdrs
      241 rvaitrgakt vmldipdmia kganpddivl hdgdlvrvys qndskvyvlg evghpgsqll
      301 dngqmtlnqa lgsaggvdpn sgdasqifvv rrrsdnrtav fhlnasspva matadgfele
      361 pndvvfvdas slvrwsrvin lllpsteaaa tsravgy
//
LOCUS       WP_258002237             280 aa            linear   BCT 02-MAR-2025
DEFINITION  energy transducer TonB [Burkholderia sp. WAC0059].
ACCESSION   WP_258002237
VERSION     WP_258002237.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. WAC0059
  ORGANISM  Burkholderia sp. WAC0059
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (residues 1 to 280)
  AUTHORS   Braun,V. and Hantke,K.
  TITLE     Recent insights into iron import by bacteria
  JOURNAL   Curr Opin Chem Biol 15 (2), 328-334 (2011)
   PUBMED   21277822
REFERENCE   2  (residues 1 to 280)
  AUTHORS   Shultis,D.D., Purdy,M.D., Banchs,C.N. and Wiener,M.C.
  TITLE     Outer membrane active transport: structure of the BtuB:TonB complex
  JOURNAL   Science 312 (5778), 1396-1399 (2006)
   PUBMED   16741124
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015506.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03544.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Burkholderia sp. WAC0059"
                     /db_xref="taxon:2066022"
     Protein         1..280
                     /product="energy transducer TonB"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=29184
     Region          <66..207
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          202..276
                     /region_name="TonB_C"
                     /note="Gram-negative bacterial TonB protein C-terminal;
                     cl10048"
                     /db_xref="CDD:471968"
ORIGIN      
        1 mthrrrtrag rvldvfdapr priaaalvla vvlwwtfvad farglsefdr pvaplpalda
       61 rlvrlpppkt paadahapva mspsgsigst arrvapatps kvsrtetapa rprpprpvvl
      121 aapspspaep ghtppvstet eaathatttr stadatgrpa gpatgtpgpt pvatpgalag
      181 traapsagda sgnvparall qplpalpddl rddalraval arfsihadgs vdvtlihptq
      241 sprlnqllld slrqwrffpa mkngqpvest qdirvhvnvd
//
LOCUS       WP_258002281             570 aa            linear   BCT 02-MAR-2025
DEFINITION  hydantoinase B/oxoprolinase family protein [Burkholderia sp.
            WAC0059].
ACCESSION   WP_258002281
VERSION     WP_258002281.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. WAC0059
  ORGANISM  Burkholderia sp. WAC0059
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (residues 1 to 570)
  AUTHORS   Watabe,K., Ishikawa,T., Mukohara,Y. and Nakamura,H.
  TITLE     Cloning and sequencing of the genes involved in the conversion of
            5-substituted hydantoins to the corresponding L-amino acids from
            the native plasmid of Pseudomonas sp. strain NS671
  JOURNAL   J Bacteriol 174 (3), 962-969 (1992)
   PUBMED   1732229
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10000641
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Burkholderia sp. WAC0059"
                     /db_xref="taxon:2066022"
     Protein         1..570
                     /product="hydantoinase B/oxoprolinase family protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=59728
     Region          16..567
                     /region_name="HyuB"
                     /note="N-methylhydantoinase B/oxoprolinase/acetone
                     carboxylase, alpha subunit [Amino acid transport and
                     metabolism, Secondary metabolites biosynthesis, transport
                     and catabolism]; COG0146"
                     /db_xref="CDD:439916"
ORIGIN      
        1 mnaspmpaaa qpalydpvgm evfsnrllsi tedmnntlvr ssfstniker rdcsvalfda
       61 rgrlvvqgtq ipmhlgsldg avkavreqyp gdairpgdvf vcndpylagg shlpdinivt
      121 pvfsggelrf flanvghhad vggavpgsia gglrsifeeg vripavrivr egvleadllr
      181 lvcsntrdpe eraldlnvqi atnargadal taliaqmgla tvlravddll aytrirlakr
      241 igelrqgsyr fvseldddgl aggepvpicv avtiegerir fdftgsarqa rgalnlpdvv
      301 lracvyyavk alldpglpvn aglfepleiy sppgtitnpa ypaavgarsi tgqkvagaif
      361 gafrgvlppe kimassndcc paivfsgrla sragefvyme tlgggggary dedgmdaihv
      421 hltntsnlpv ealeneypll mdeyalipds ggagrtrggl glarqisara dgivfsarsd
      481 shvtgvaagv aggldgrrar lvkfaggaat elpsktanll lkagesvrie tsgaggygpp
      541 aerapaaler dlrdgkvsga qadavyrgar
//
LOCUS       WP_258002300             157 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Burkholderia sp. WAC0059].
ACCESSION   WP_258002300
VERSION     WP_258002300.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. WAC0059
  ORGANISM  Burkholderia sp. WAC0059
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 157)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Burkholderia sp. WAC0059"
                     /db_xref="taxon:2066022"
     Protein         1..157
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=17276
     Region          <36..146
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(109,112,135,144)
                     /site_type="active"
                     /db_xref="CDD:271177"
ORIGIN      
        1 mfsicrewvd vrcrlikfpp darravnesv pvalalsqra iavfrnfaai aegvdarlar
       61 sshgpadvrl aglkgrvfgt sanavicvwk rtlkiastdn pavaslrwhd lrhevtsrlf
      121 ekglhpmgva sitghrsmqm lkrythlnpe slipklg
//
LOCUS       WP_258002316            4138 aa            linear   BCT 02-MAR-2025
DEFINITION  filamentous haemagglutinin family protein [Burkholderia sp.
            WAC0059].
ACCESSION   WP_258002316
VERSION     WP_258002316.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. WAC0059
  ORGANISM  Burkholderia sp. WAC0059
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023959.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12545.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4138
                     /organism="Burkholderia sp. WAC0059"
                     /db_xref="taxon:2066022"
     Protein         1..4138
                     /product="filamentous haemagglutinin family protein"
                     /calculated_mol_wt=412572
     Region          52..1722
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          1174..2884
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          2493..4129
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          3962..4072
                     /region_name="DUF3739"
                     /note="Filamentous haemagglutinin family outer membrane
                     protein; pfam12545"
                     /db_xref="CDD:432625"
ORIGIN      
        1 msptqalqas qpsirnlata aqgiaqqiaa qqaaaaaaaa tpsnvpnglt pgglqvasgi
       61 tfardgngnl vsqntdtgtq gsttdpgnpl lwinaygpqq svdgsghvtv dvkqtaqnav
      121 ltwqtmnvgr qttlnfdqsg gtqtngansw ivlnrivdps gapsqilgnv qaqgtvlvin
      181 rngilfgags qvnvhsllas sldllnmddd dpsgqttgqg idstpfvtgn laqsaeeiae
      241 snrqflslpa gtadgglaal eagtstttgs stglpnevlg lgnkvavsst sqlqtpgnit
      301 ieagasittt adtsasnggf vliaapnvtn agnitvaptg qvvlaagvgv gllassgnpq
      361 tlypeltgai glvtgstttd itpagtlint glvqadrgei sllgstvqqn gvigvttsvn
      421 tpgtitistv deyisntptg aaypgaavvt lgngspnpgn vtnragalsf gpgsvtavlp
      481 dddgetatss tgqttftpgs vtvtagsvwf qsgalveapg atvqvaaltp svagdatppg
      541 dtavqgriyv dsgatidvsg ladvelpisd illtiptite neladspllr dtflnglkgv
      601 tvdstlsgtd sdgvewvgsp ilnlagdisl mprtvdqlmt nggtitlsgn evmtasgsll
      661 nlnggyihyl ggtvdttrlv dadgaivpig easpydtyvg vageftetss rwgitntwln
      721 plltggvyes dyivggnagt lnvfassamv ldgtitaqaf dgekqvqgnd lptggtfnlg
      781 gsalvdltqg pntittgetg tvilqdeapq lsslgenfga ttsidtaals dlsstdpgnv
      841 lattvvpvdt lnsggfanvs vttnagnsgg givvaqgtrl eaqpggsial tspdgdvtil
      901 gsliapsgti svssggnrgt vgggivvgpe gelsvagqwv nndaqlspat tqgdseying
      961 gtitlstala sskgsdssgs idleagsvid vssggevqsd gqllendgip egtagnlslt
     1021 tystnstapy gdssegvaga ptvqpvsgqi vmdgtirseg fagggkltlq atgfriggdp
     1081 aqtpagdlyl padffaqqgf gsyqlnalyd atvapgaivt ltqknlipda alllaptgtd
     1141 istsglvtsg tldayhrqat dlvitagayl gwetasgarp ayagvtggvt lgvgaqiigd
     1201 agasiglgsp aqvtvlgsii apggsitlsa dslvdgyalp gqetsadidf tdgftsssks
     1261 vwigsgvvld vagvaltdpq aapvrnglnt fipdtgkvlp ggsvtisdds gyivaqsgsq
     1321 idvsgtsavf delqssglyt pqqvwsnags itlgassgll fdgtlqaqpg atqaqggtlt
     1381 ivpeetavvn aaqpgggvap stspgaqilv fqqsgstvpa gltpgadita altgtvggdp
     1441 tgildfsadr ltgsgiaild vaeelsgksi pvaftgnvnl tlsgevvlnt aqilalngsq
     1501 tsalsnqlsa aikaatssgt qsdflsldta givasvledd ssgaettasi sapyvavign
     1561 gprypmsldq vasasmlnin asfidlenqf qidnfgqstf sssgdirlts teqvisgsda
     1621 lapgelfssg nltfqasdly pstgstfild aigpagsggt sapttisfls ngassvplsa
     1681 ggsllvdatd ivqqgtvrap sgslifgvgd ptdstvaaef snmplvatqs vtladgsvts
     1741 vsndgavipy gttvdgvewq fnpvagtnaa pdlsgapaky igisgnnvsl nsgatidlsg
     1801 ggdlqaeewv sgtggtrdvl aqynvsytns atgtavptnv gvanvyailp gaqssvaayd
     1861 pvfaqtlqpt ssgstitesm gvgqaglgna vgesvylsgv aglpagyytl lpakyatlpg
     1921 ayrvtvasas glvtpgssev lpdgtvlaag ymansltgar satpvelnle sgavwqqysq
     1981 ytltsansff pslaasagdv tpplpidggq lvlaanqtlg lgatlsasaa dggapaevdi
     2041 asqaiqivgn geaampgyvt inaeqldtlg agslliggtr tattsgvtit piassvvlsn
     2101 daaspltgpe imlvasndvd vksgsviaae gvypsakdep itiaanastg gtsdgallrv
     2161 sdgqyvgvtn agqvndtgvl sigagaslsg gqaltldssg titvapsasl sgnviaaqgs
     2221 aitftstaga daaqlpglvi dpalmaelgk aqdvilrsag tmyfdgspdi afdhdvelsa
     2281 gtfdsdggav tisapyvtfd ntlgasdpas iagtgtlvvn agridfgngd atlsgfsnva
     2341 mnatagivse gtgtfdfgta pvtlsapvfl adtasgatvk ttgalalnga qstalslsal
     2401 ggafsfvggt vdvngasisa pagnvsfeat sgnltvnsgs iistagvakq fydiieyapg
     2461 gaitltadtg aitlasgatl dfagaaaggd agsltasapd qtvslagtle gaaatgyagg
     2521 sfalntgsav dldslaqtls asgvndeivv qtdsgnltls agntltahvv sltanggagd
     2581 aldtangnvn idgtidasgi aggeidlygk sgvnlqgsli atgssateqg gavnigtsgn
     2641 gsttslnsty gyenvtpsgs gaitvgnsav idvsggtagg lsggtvsfra piltdgtvdv
     2701 siapgaqikg srattldaya vwstddqstn aaqhfdgivd pagwydnsgn llsgtftsqs
     2761 gatiyytaad gstpaslsnd pgatpdqita dlaadlendy ftpttantdh etfygyaggs
     2821 sasgagtlmg yvehgvqsva nqfagtaiqn favvpaidld npdpkindgn isiltnwnlg
     2881 agtsesdlay rfdgqapvit fraennvlvk asltdgffqi anpisslkti titappaaty
     2941 qeaykafyyn tdwplkgyfa sygidigpey kstfagfwdt dkksfddfvq apaqesqfag
     3001 asstdisdyy slyqeyftyl dktevayllg snaekaygra paagqplftv saptaaeens
     3061 adsanayqay fqqyeayita llgwlktvss stayqivplq appevalpvt agatvsvgtl
     3121 pvdnspspva tasnpfplqf atlmsgtsst fnlvsgasla sadplavesq avlvadsigq
     3181 sgeqgsvivs gnfaydnann ptndandmti lapttirtga gavniaaann iwlydpdess
     3241 lveqaapllq stvgviytag vpaagtsvgs taalidgnpq ggkpdiltsp vvspdgagni
     3301 siaaqnding lenvidetgt vsgdpggdig qlwtawltan nvsnsvgqvi qttidfaefd
     3361 qgvmsvggnv svaaghnvtd levslpttsy qpssgtgitv vgggnltvsa gndiesgeyl
     3421 vaegtailka ggqitsdgvd ytsidgnlla qgkpanvsig vvptliatid gsfdlvarqg
     3481 iaigsifgpg yfplsagsda sasavnaqtt tgdvdvgtlt alpgeeqfst slpasinlla
     3541 ldggitvasg galaaspase lsvvadrsin fsgnsvlqmg dedpnlidet dpvriysltg
     3601 siidgviqps ggsagfygdl lgidvdkpaf ieagqdivnl vfegqnlred dvtrivagrd
     3661 iddtplspga nslilpelvl ggsgyfdvea grnigpltsa aqayaslgnt ykggtfgiea
     3721 igntdnsllp hesanvevlf gvspgiddta fisnyidpss ipagissvtp alvafmqqyd
     3781 agqtydtglv asqpavqplt agqawqqfqa lpkyiqqlfv ervffsiltd vgddyndass
     3841 pyyqqyargy qaintlfpss lgytgndlgg gtnganslvq tgnldvrntt iqtqqggdvs
     3901 ilgpggdalv gsssappeiv egnavivgpg qqgiltmetg niniftdqsl llaqsrvfte
     3961 qggnitiwss ngdinagqga tssadipppl yvcdanhfct ldakgqitga gigtlqtipg
     4021 aptgdanlla prgtvdagaa girvsgdlnv aalqvlntan iqvqgkatgi pvvavvdtga
     4081 ltaasaansa vtevaqnlar nvaagagrqw qitvevegfg dsdgvngdsm srkrgrpd
//
LOCUS       WP_258002317             752 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Burkholderia sp. WAC0059].
ACCESSION   WP_258002317
VERSION     WP_258002317.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. WAC0059
  ORGANISM  Burkholderia sp. WAC0059
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (residues 1 to 752)
  AUTHORS   Das,A.K., Cohen,P.W. and Barford,D.
  TITLE     The structure of the tetratricopeptide repeats of protein
            phosphatase 5: implications for TPR-mediated protein-protein
            interactions
  JOURNAL   EMBO J 17 (5), 1192-1199 (1998)
   PUBMED   9482716
REFERENCE   2  (residues 1 to 752)
  AUTHORS   Lamb,J.R., Tugendreich,S. and Hieter,P.
  TITLE     Tetratrico peptide repeat interactions: to TPR or not to TPR?
  JOURNAL   Trends Biochem Sci 20 (7), 257-259 (1995)
   PUBMED   7667876
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019339.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07719.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Burkholderia sp. WAC0059"
                     /db_xref="taxon:2066022"
     Protein         1..752
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=82411
     Region          28..>451
                     /region_name="PEP_TPR_lipo"
                     /note="putative PEP-CTERM system TPR-repeat lipoprotein;
                     TIGR02917"
                     /db_xref="CDD:274350"
     Region          28..52
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          58..86
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          97..120
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          131..154
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          160..188
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(161,164..165,168..169,171,195,198..199,202..203,
                     205..206,229,232..233,236..237,240)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          193..223
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          228..256
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          298..324
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(300..301,304..305,307,331,334..335,338..339,
                     341..342,365,368..369,372..373,376)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          329..359
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          364..392
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          398..425
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <659..724
                     /region_name="RfaF"
                     /note="ADP-heptose:LPS heptosyltransferase [Cell
                     wall/membrane/envelope biogenesis]; COG0859"
                     /db_xref="CDD:440620"
ORIGIN      
        1 mvgkpnvvmr taagtpsavv qaamvdglrr ardllgrrqy reaqalyegv llmdasnaea
       61 mhllgfallk agdpvraepl iarslelgwt hawnianhga vlialeryqe aldvlarall
      121 lepaslstqt lradalvgig rreealeiyd qilarmptia dawmgrgrll vasgrpadav
      181 lcfdrvlqld agsvdayvrr ghalrdlgyr edalrnyrla lvirpkspdl lsmcagvlld
      241 mqqpaealac veqalavspd svallyqscv aldllhfhee llqrssrllk lapqyvavwl
      301 argnalqgls ryaeaadayr eamvrdphsv dalrnragal rmmglhaqal ehydsaltva
      361 gadaellynr avalqqlgry dealdsygta veapketaqa cytaavslqq lgrheeaisw
      421 feqaytlepg hgaarrsaal crlltgdfrr gwkqhedrwl tgearvrrrh tdrpiwngie
      481 svagktillh aeqgygdtiq fcryaslvad rgatvvleip avlkpvlrsl rgvqqivseg
      541 epvppfdlqc plmslplafd taldsipspv pylyadqsrv rgwagrlqal sagrlkigla
      601 wsgnprhnnd enrsiplael apvyglnatf vslqplvrer daamlaasgi ldwgrelgdf
      661 adtaglisal dlvitvdtsv ahlagalgqp vwlllpcvpd wrwlldreds pwyptmklyr
      721 qgrpgdwpsl vqrvaqslis rmlddpsqtp ag
//
LOCUS       WP_258002332             414 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail tip lysozyme [Burkholderia sp. WAC0059].
ACCESSION   WP_258002332
VERSION     WP_258002332.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. WAC0059
  ORGANISM  Burkholderia sp. WAC0059
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (residues 1 to 414)
  AUTHORS   Xiang,Y., Morais,M.C., Cohen,D.N., Bowman,V.D., Anderson,D.L. and
            Rossmann,M.G.
  TITLE     Crystal and cryoEM structural studies of a cell wall degrading
            enzyme in the bacteriophage phi29 tail
  JOURNAL   Proc Natl Acad Sci U S A 105 (28), 9552-9557 (2008)
   PUBMED   18606992
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037025.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18013.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Burkholderia sp. WAC0059"
                     /db_xref="taxon:2066022"
     Protein         1..414
                     /product="phage tail tip lysozyme"
                     /calculated_mol_wt=38615
     Region          269..411
                     /region_name="Phage_lysozyme2"
                     /note="Phage tail lysozyme; pfam18013"
                     /db_xref="CDD:465617"
ORIGIN      
        1 msisslqtgy saglvsggya ggtygasgag gaggtdpnql anflltmmee laqmlaasqs
       61 gsggtgngss vgglgggygg sgsggygggl agigsgggyg gtsgigggay ggtsgiggsg
      121 tygtgaygtg gsgqgngqnl leeamellal lsqmeqnsgs gggygggtsg agggyggaps
      181 vggggyggap avggggygga ptvgsggygg apavggagsd gggstpsgsa paastggsgi
      241 iddvspssga ssgsgsssas gsvdssdpaq aiaqnlestf glnqaqvagv lgnlqqesgl
      301 qgdvnqggat gapssddadd nengwglaqw ggarkegeiq yadennespg slqanlgymd
      361 qelegpysqt italkgtssp dqaaqvwded yeqatdpqms nrdqyaqqfy segl
//
LOCUS       WP_258002488             154 aa            linear   BCT 02-MAR-2025
DEFINITION  MATE family efflux transporter, partial [Fischerella thermalis].
ACCESSION   WP_258002488
VERSION     WP_258002488.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01554.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..>154
                     /product="MATE family efflux transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          17..>154
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 mtlqkqsqvt neilqgnifk lmfklsipsi lgilmlslnt ffdalfagqf lgtnalagis
       61 lalpltgivd gfalligvgs asvlsraiga gdiktqsklf gnlmlmgivv sffitilgys
      121 fgeelivfmg gsgevtaagt eyfkiyilgs ifyi
//
LOCUS       WP_258002494             136 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5684 domain-containing protein, partial [Fischerella thermalis].
ACCESSION   WP_258002494
VERSION     WP_258002494.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039825.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18936.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         <1..136
                     /product="DUF5684 domain-containing protein"
     Region          60..>122
                     /region_name="DUF5684"
                     /note="Family of unknown function (DUF5684); pfam18936"
                     /db_xref="CDD:465919"
ORIGIN      
        1 itmlfqtynf nlsliyliaq anrsggaggf lgfiigiaay ifasycfyki yqklgepnaw
       61 fawipilnnw imykagdqsp wwiiglfipf vnivavvfli iafvnivkkl gknpwlillm
      121 iipivnfvil yqfafg
//
LOCUS       WP_258002502             563 aa            linear   BCT 02-MAR-2025
DEFINITION  CHASE2 domain-containing protein [Fischerella thermalis].
ACCESSION   WP_258002502
VERSION     WP_258002502.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 563)
  AUTHORS   Zhulin,I.B., Nikolskaya,A.N. and Galperin,M.Y.
  TITLE     Common extracellular sensory domains in transmembrane receptors for
            diverse signal transduction pathways in bacteria and archaea
  JOURNAL   J Bacteriol 185 (1), 285-294 (2003)
   PUBMED   12486065
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017076.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05226.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..563
                     /product="CHASE2 domain-containing protein"
                     /calculated_mol_wt=62938
     Region          21..272
                     /region_name="CHAT"
                     /note="CHAT domain; cl19248"
                     /db_xref="CDD:473154"
     Region          347..>475
                     /region_name="CHASE2"
                     /note="CHASE2 domain; cl01732"
                     /db_xref="CDD:470317"
ORIGIN      
        1 miyefqrwlr svelydlraq iaqvsqelak akpgttevvq vflsctpiel srfpwevwev
       61 gtefatagai qiirtplnia aptvvtpnkp hqgrarilai lgdetglnfe aekkmlksll
      121 riadvqfvgw qpektaaevr qeisnaiade rgwdvlffag hsnetemtgg elgiapdasl
      181 sireiapqlg aakkrglqva ifnscsglsi adalidlgfa qvivmrepih nsvaqgflvq
      241 flqgmakhld vyaslmaarq flrmgkshty pssylvpslf chpgaklyqi pqfqwqqrlr
      301 qmipirfeai alavsltlgv ltpfqellld triltqsvyr nvtaqipsee appvalvqid
      361 teslyragip etqirpmnrs yiaklldrlr tlntsvvgld fifdtpqkdp psadqdlgqa
      421 vrravdanmw lvfgallept revgtnealg inkwnwtlqg yvdaypnfve lpdadrdcrk
      481 tcpfayllsl vqlanqemig lpqpqttrqq nlraqlldvi qrqhpqtgnl stlwhwrspf
      541 glqplidysi ppskftprfp lgn
//
LOCUS       WP_258002650            1143 aa            linear   BCT 02-MAR-2025
DEFINITION  class I SAM-dependent methyltransferase, partial [Fischerella
            thermalis].
ACCESSION   WP_258002650
VERSION     WP_258002650.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024967.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13578.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..1143
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         <1..1143
                     /product="class I SAM-dependent methyltransferase"
                     /EC_number="2.1.1.-"
     Region          170..288
                     /region_name="Methyltransf_24"
                     /note="Methyltransferase domain; pfam13578"
                     /db_xref="CDD:433324"
     Region          651..993
                     /region_name="GT4_MtfB-like"
                     /note="glycosyltransferases MtfB, WbpX, and similar
                     proteins; cd03809"
                     /db_xref="CDD:340838"
ORIGIN      
        1 sfpsekevvd fynntennlk nyplervlyw lrqdieyvkn sglsehgirk ikqennidyf
       61 dlvlidgsef tgnaeldeiy gakyiclddi ntfknyrnfl rlledssytl incnkrirng
      121 yaifkqknvk pvtyqtihda vksipgfmip gqeeylfnkv qslpeeaviv eigsfkgrst
      181 vamgyacigt nrkiyaidtw dgndsdfser qffeiwrqni qingleeyvi plrgyshdal
      241 scwheltdgk didfifidgs hqyldvlkdf elsfplvkdg gwiafhdvih twpgpervwh
      301 ktakyilvnh eyssslacgq kiltatnssl ttglpihfft ivlngqpfir yhieifkqlp
      361 fkwhwhiveg vadlkhdtsw svklggsisd eihkngrscd gtteyldela qlypdkitiy
      421 rqsegvfwdg kremvnapla niqeecllwq idvdelwtle qictareifi snpektaafy
      481 wcwyfvgeql iistrncyaq npqqewlrtw rykpgyiwaa heppvlvetl pdgqfknvaa
      541 vnpflhhete qhglvfqhfa yvtpeqlrfk eqyygyssav aqwnalqktt kfpillreyf
      601 pwvrdetqvd lahsrgiipi aqresgsniw rflqpsevqq eitqinkvsp iiivdgvffq
      661 lyqtgiarvw kslleewasn gfakhiivld radtapkipg iryrtipayd ydntdvdrei
      721 lqqicdeega evfissyytt pittpsvfma hdmipevmgw nlnqamwrek hygiqhatay
      781 iavskntard lvkcfpeisl esitvakngv nhqvflpatp edinrfriky giykpyfilv
      841 gpgsgyknsi lfyqafslla ssngfdivct gsggllapef rtytsgsvvh mlqlsdeela
      901 taysgavalv ypskyegfgm piieamacgc pvitcpnasl pevageaaiy ikdddvqgla
      961 dalcevqkps vrqsliaagl eqskkfswsk maeivssali datllplnlk qmnliifpdw
     1021 lqseeligle laqviktlai hsessnitll idtnniated velflsgvtm nllmeedldi
     1081 tdgleisivg nladiqwkvl lprlhgrivl ehenqqaliq akadtlpaye lasfsqardk
     1141 eff
//
LOCUS       WP_258002692             395 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Fischerella thermalis].
ACCESSION   WP_258002692
VERSION     WP_258002692.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 395)
  AUTHORS   Das,A.K., Cohen,P.W. and Barford,D.
  TITLE     The structure of the tetratricopeptide repeats of protein
            phosphatase 5: implications for TPR-mediated protein-protein
            interactions
  JOURNAL   EMBO J 17 (5), 1192-1199 (1998)
   PUBMED   9482716
REFERENCE   2  (residues 1 to 395)
  AUTHORS   Lamb,J.R., Tugendreich,S. and Hieter,P.
  TITLE     Tetratrico peptide repeat interactions: to TPR or not to TPR?
  JOURNAL   Trends Biochem Sci 20 (7), 257-259 (1995)
   PUBMED   7667876
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019339.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07719.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..395
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=44016
     Region          2..192
                     /region_name="Beta4Glucosyltransferase"
                     /note="UDP-glucose LOS-beta-1,4 glucosyltransferase is
                     required for biosynthesis of lipooligosaccharide; cd02511"
                     /db_xref="CDD:133005"
     Site            order(81,83)
                     /site_type="active"
                     /note="putative metal binding site [active]"
                     /db_xref="CDD:133005"
     Region          194..>387
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          200..230
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          239..267
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          278..304
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(280..281,284..285,287,311,314..315,318..319,
                     321..322,345,348..349,352..353,356)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          309..339
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          344..372
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mklslcmivk deektlpkcl gsvrnvvdei vvldtgstdr tvhiankfga kvhefqwcnd
       61 fsaarnealk yvtgdwilvl dadeslaqki ipqlqeaihr eeyllinlvr qevgavqspy
      121 slvsrlfrhh peiyfsrpyh alvddsvtei lskepqwqvg ylqgvailhs gyqkdvidkn
      181 nkyakaqaam eqflathpdd pyvcsklgal yvetgkiseg vellargvtt aednydilye
      241 lyyhlgiays rvqnlkqava hyqaaiklpi ypmlklgayn nlgnlfktag dlnhakiaye
      301 nalkidpnfa tghynlgmtl kamglytdai acyqkaigin pnyadayqnl gvvllklgnl
      361 qaglaafgra ialheknnpq eaqrlrqglq emgli
//
LOCUS       WP_258002700             542 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258002700
VERSION     WP_258002700.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>542
                     /product="Ig-like domain-containing protein"
     Region          <210..374
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          <316..507
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 mdsgdeivfs slpanselkr dgadlvvrtp detfvlkdaa akladesvvv rlgeqplvvt
       61 qapnenihlp agvqlaglaa pgqnsafglq sfvsaageqs lqsdtvspva mgavttsgik
      121 daglsdgglm gnlrtdvrpt deipmyqqkl tqlpldprid vpsrtdfgvn aaryepapaa
      181 vtapnfvmsp gdkdpgagvl qnvtnpqldg sgpanavvta yevasdghli slgtatsdgm
      241 gnfaitpntp ladgthdivf qaqkgdltsp fsaptsvvid tkintptigl passdsfgag
      301 tvgtnhddit nvtnptltgt aeagatvyvs dgsghtvsti adsngnysvq apgtlaegnn
      361 vftvqavdka gntsgtaqqn vtldtvaatl papqldhgsd tgasnsdgit ratqpvltgg
      421 gaepnalvtv yadgvsigqa tadslghyti hsgvmadgth qitarqidia gntsalsgaa
      481 lvtidtsepa panlklvddt fglhtagtps dgltkdsrvt isgtasagdv vtlmdgatsv
      541 gq
//
LOCUS       WP_258002747             700 aa            linear   BCT 02-MAR-2025
DEFINITION  4Fe-4S binding protein [Janthinobacterium sp. AD80].
ACCESSION   WP_258002747
VERSION     WP_258002747.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. AD80
  ORGANISM  Janthinobacterium sp. AD80
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024211.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12801.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Janthinobacterium sp. AD80"
                     /db_xref="taxon:1528773"
     Protein         1..700
                     /product="4Fe-4S binding protein"
                     /calculated_mol_wt=77621
     Region          1..694
                     /region_name="NosR"
                     /note="Transcriptional regulator NosR of nitric oxide
                     reductase [Transcription]; COG3901"
                     /db_xref="CDD:443108"
ORIGIN      
        1 mrlfiacwlf lfilgqawag vltkaelvrr fpaplvvgdk evdvpvwplf kqnatatdlv
       61 gyvfesvdla pipgfsgvpv nlliainpqg sflevavlsh hepvfldglg eaplfqfvqq
      121 yknlslkqni aigartkraa dtthadidgv skatasvrii nqsvlasalk vsrkklgfaq
      181 grdpdqlari rmavveklsv tqmleqgliq hvrlsnkave alfaggpgag ldaegardpe
      241 gifidfylay vsvpsvgrnl lterswnklr nrldegdham lvlsrgrysv lgddfvrgtv
      301 pdrlllkqdg lpidmrdldl elnladtasl ptennvvlri isqagldaas plafslpitr
      361 skgivyperi trnvdlsyrl parfhttpqg sdaswrgtwt grkvellsll aglallagal
      421 awqkrlvrds rqflwfrrvf llftigfigy yaqgqlsivn ltgaiqaama grglgfflfd
      481 pmtvilwafv lfsllmwgrg tfcgwlcpfg alqeftgklg qwlrlpqwki rprldarlkw
      541 ikyvllaail assmfssqlt dklvelepfk taitlnfvra wpfvayavgl lllssvsykf
      601 fcrylcpfgg alallgrvrl fswiprrkec gtpcqtcrhr ceyhaiapdg kvdygecfqc
      661 mdcvviyasd ekcaplmldi krartipivr atveessnaa
//
LOCUS       WP_258002760             588 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Janthinobacterium sp. AD80].
ACCESSION   WP_258002760
VERSION     WP_258002760.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. AD80
  ORGANISM  Janthinobacterium sp. AD80
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (residues 1 to 588)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Janthinobacterium sp. AD80"
                     /db_xref="taxon:1528773"
     Protein         1..588
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=62005
     Region          44..184
                     /region_name="MCP2201-like_sensor"
                     /note="ligand-binding sensor domain of Comamonas
                     testosteroni CNB-2 MCP2201 and similar chemoreceptors;
                     cd19411"
                     /db_xref="CDD:438629"
     Site            order(49,52..53,56..57,59..60,63..64,67..68,70..71,74..77,
                     83..84,152,174,177..178)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:438629"
     Site            order(61..62,65,68,91..92,95,125,128..129,132,162)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:438629"
     Region          <164..547
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(306..307,310..311,314,317..318,320..321,324,
                     327..328,331,334..335,338..339,342,345..346,348..349,353,
                     355..356,359,362..363,366..367,370,373,376..377,380,384,
                     387,394,398,401,404..405,408,411..412,415..416,418..419,
                     422..423,436..437,440,443..444,447,450..451,453..454,
                     457..458,461,464..465,468,471..472,474..475,478..479,
                     481..482,485,488..489)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            376..409
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 mnlakmkvgt rlglgfalvl vllvavtvlg iarmaqiqer ldhvinvnnv vtrlvidmrg
       61 nvsdritslr iltlmtdasd mepemarikt qtatyqdtqk kleekfaies tpeekallas
      121 ikeyeaaamp aiakasalwm andaegatrv mikeirpvqk kwmealeqla tledklneqm
      181 qsdarkafds arlfmiilga lavamgvaaa lvitrgllkq lggepdytas iagsiangdl
      241 sigihtqpsd nssllaemke mrnslvgivg qvrvgtetig tasreiadgn idlssrtemq
      301 asalektasa meeltstvkq nadnareank laatasdval kggsvvsqvv dtmssinesa
      361 kkivdiigvi dgiafqtnil alnaaveaar ageqgrgfav vasevrnlaq rsagaakeik
      421 iliddsaekt ergtrlvgqa gvtmgevvds vrrvtdimse iasasqeqsa gieqvnlsii
      481 emdgmtqqna alveqaaaaa qslqdqaael ahvvsifklv egeekpaayv papvaaapva
      541 vrkpaaalrp vksltrkaea aapaapaapa prkaaaasst sndeweef
//
LOCUS       WP_258002768             185 aa            linear   BCT 02-MAR-2025
DEFINITION  PEP-CTERM sorting domain-containing protein [Janthinobacterium sp.
            AD80].
ACCESSION   WP_258002768
VERSION     WP_258002768.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. AD80
  ORGANISM  Janthinobacterium sp. AD80
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (residues 1 to 185)
  AUTHORS   Haft,D.H., Paulsen,I.T., Ward,N. and Selengut,J.D.
  TITLE     Exopolysaccharide-associated protein sorting in environmental
            organisms: the PEP-CTERM/EpsH system. Application of a novel
            phylogenetic profiling heuristic
  JOURNAL   BMC Biol 4, 29 (2006)
   PUBMED   16930487
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019225.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07589.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Janthinobacterium sp. AD80"
                     /db_xref="taxon:1528773"
     Protein         1..185
                     /product="PEP-CTERM sorting domain-containing protein"
                     /calculated_mol_wt=19031
ORIGIN      
        1 mnktkhavlg lclavsacla plaqaaswve isnpakggfk vggntvtygp iaaesvwvyd
       61 ganpagaqsa aaikslvttq fglptsgtgs lvlasqgdla ssksgtfsin ssfdylaihy
      121 grgellfhwd spvaantvfn fgnlprgisn fraysavsav pepatygmll mglgllgfma
      181 rrrrg
//
LOCUS       WP_258002805             221 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein
            [Janthinobacterium sp. AD80].
ACCESSION   WP_258002805
VERSION     WP_258002805.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. AD80
  ORGANISM  Janthinobacterium sp. AD80
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (residues 1 to 221)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Janthinobacterium sp. AD80"
                     /db_xref="taxon:1528773"
     Protein         1..221
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=23595
     Region          1..>201
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(7,9..10,12,30,75..77,113..115,126,130,149..152)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187579"
     Site            order(91,115,126,130)
                     /site_type="active"
                     /db_xref="CDD:187579"
ORIGIN      
        1 mrilltgasg figthvstal laegfqlvct vhharrhayv gdgqrvrlve adfahdtaka
       61 awlprlagid vvincvgiia ehgaqtfaal htqtpcalfa acaesevqlv iqlsalgade
      121 gavspyhlsk kaaddflasl plravivqps lvygddgasa rlfrmlaslp vyprfgrapq
      181 lvqpvhvddl sdlivallra papwvarrra acppsvrrrc r
//
LOCUS       WP_258002809            1004 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Janthinobacterium sp. AD80].
ACCESSION   WP_258002809
VERSION     WP_258002809.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. AD80
  ORGANISM  Janthinobacterium sp. AD80
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (residues 1 to 1004)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Janthinobacterium sp. AD80"
                     /db_xref="taxon:1528773"
     Protein         1..1004
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=110428
     Region          22..250
                     /region_name="dCache_1"
                     /note="Cache domain; pfam02743"
                     /db_xref="CDD:460673"
     Region          288..343
                     /region_name="HAMP"
                     /note="HAMP (Histidine kinases, Adenylyl cyclases, Methyl
                     binding proteins, Phosphatases) domain; smart00304"
                     /db_xref="CDD:197640"
     Region          <335..895
                     /region_name="PRK11107"
                     /note="hybrid sensory histidine kinase BarA; Provisional"
                     /db_xref="CDD:236848"
     Region          911..994
                     /region_name="Hpt"
                     /note="Hpt domain; pfam01627"
                     /db_xref="CDD:426352"
ORIGIN      
        1 miavvtmvqv khmrddftqv llsqqtalie rtadelddkl amlldiitqt arhqpaslma
       61 dtaqlreyyk qramlalfdd vlvldtqgkv vanvpevpgr ngvdvadray fqtvmrtkqa
      121 mitepmlgkt shlpivqmva pvldsngeva givigvlrly kdnmlghlrt akvgksgyyf
      181 iltreavpry vlypdasrll qprapnanpv ttqllkedge gsmvstnsrg vtavnsfkrl
      241 ksvnwllaas lpvadafepf ngvlyrlvlw sigasllaaa vlawvtvrll splvrlrdtl
      301 lslrrsgsrf tpvpvqqrde igelteafng lmserdrlqq eiearasele rerdraeaan
      361 raksdfvanm sheirtplna vlgmvyllgn tkldteqrky ltmvrvagqs llgilndvld
      421 fskiearrmd lspvefdlde vmntlattmt mnagekelel aiavepevpr rlvgdaqrlq
      481 qilvnlagna ikftesgevv vavsvaeskn erawlrfevr dtgigmteqq qaqlftafsq
      541 gdqsitrrfg gtglglaisk hlihmmggei avassegkgs rfwfsvpfev laqpaetrrt
      601 ptlgplrllv addnrttrel ivklihawgw nadevdsgfa aielyrerla qqqpydvvla
      661 dwhmpvmdgl atakairqaa sgqrqpivvm vnafarnhle eissaaeadv vlmkpitgss
      721 lfdalhqali akedggeprm lhqplgtela gvhfllvedn hlnqavargi lehmgatldv
      781 vgdglqaver lrtealrydi vlmdmqmpvm dgfsatqlir telrlnlpvi amtagvlase
      841 rercmtagit dfiakpvvve emmevinrhl pkrppvqapg aaapdddevf smaplmrvmg
      901 rdakgrgvlr rmvedalnkg mtpvrdaeaa lqagrhsdva rilhglrgsv gtlgtkrlir
      961 aafateeaid tgrydavpal lavageelqr alaaatqwls rled
//
LOCUS       WP_258002828             491 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 19 protein [Janthinobacterium sp. AD80].
ACCESSION   WP_258002828
VERSION     WP_258002828.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. AD80
  ORGANISM  Janthinobacterium sp. AD80
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012409.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00182.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Janthinobacterium sp. AD80"
                     /db_xref="taxon:1528773"
     Protein         1..491
                     /product="glycoside hydrolase family 19 protein"
                     /GO_function="GO:0004568 - chitinase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006032 - chitin catabolic process
                     [Evidence IEA]"
                     /GO_process="GO:0016998 - cell wall macromolecule
                     catabolic process [Evidence IEA]"
                     /calculated_mol_wt=53116
     Region          48..90
                     /region_name="ChiC_BD"
                     /note="Chitin-binding domain of chitinase C; cd12215"
                     /db_xref="CDD:213178"
     Region          184..431
                     /region_name="chitinase_GH19"
                     /note="Glycoside hydrolase family 19, chitinase domain;
                     cd00325"
                     /db_xref="CDD:381595"
     Site            order(242..243,262,264..266,309..313,315..316,352,
                     393..394,396,405,409)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:381595"
ORIGIN      
        1 mktrqisrla splmagllgs allacggnst teppstllaa taasdscaaw saaavytagq
       61 cavydgkvyr akwwvqgtap nndqwgpwsl dtttptptpt ptptptptpt ptptptptpt
      121 ptptptpgip tkaqaeanea altnndffrk vkasirtlgn taveavqpgl asnplnvkrv
      181 erllpaakwd hyfaardasy tyrrflqava kfpavcddys dgrnadaicr hslstmfahf
      241 vqetgdhnas splpqwrqgl kylrelgcde tgagcgynve cadpvfnkvw tcgtnadgsf
      301 kkyfgrgakq lsynynygpf sqamhdgdqs vllknpdlva stwlnlasat fffvypqppk
      361 psmlhvldgt wvpnaadtta gagnnfatti miinaecgqg tekqaaqnri dyykqfaadm
      421 gwdysgeqls canmqrftpa ssasyniywe knwsaggenq cqlvsyqtpy sallagnyvk
      481 cveanwnvkl q
//
LOCUS       WP_258002883             369 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Janthinobacterium sp. AD80].
ACCESSION   WP_258002883
VERSION     WP_258002883.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. AD80
  ORGANISM  Janthinobacterium sp. AD80
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (residues 1 to 369)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 369)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Janthinobacterium sp. AD80"
                     /db_xref="taxon:1528773"
     Protein         1..369
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=41586
     Region          <1..48
                     /region_name="Arm-DNA-bind_2"
                     /note="Arm DNA-binding domain; pfam12167"
                     /db_xref="CDD:432377"
     Region          63..349
                     /region_name="XerD"
                     /note="Site-specific recombinase XerD [Replication,
                     recombination and repair]; COG4974"
                     /db_xref="CDD:443999"
ORIGIN      
        1 myrgtecret lklahskani kyaerlrgei lnaialgnfn yakyfpestq lkkfglqpra
       61 kdvtvgdlle kqfaiyeril apstlksykr vlnkilmgqw gdtlltdltp aalrtwivdl
      121 slkatsvrqi liplrgalel ainddliesn pldrvklqkt ldrdaykaey evdpfsaqei
      181 aailgaaqgq arnvfqfafy tgmrpseyia lrwesidwtg fkakversrv mgesreelkt
      241 ragrrlvdlr rsavealvaq kqhsflaggl vfldpatgqg wdntqrlslf waamikkaqv
      301 ryrnpyqtrh tfastllstg anamyvakqm ghtdttmitr tygrwveqeg gvlpdqyckm
      361 tdglkagia
//
LOCUS       WP_258002957             612 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Janthinobacterium sp.
            AD80].
ACCESSION   WP_258002957
VERSION     WP_258002957.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. AD80
  ORGANISM  Janthinobacterium sp. AD80
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Janthinobacterium sp. AD80"
                     /db_xref="taxon:1528773"
     Protein         1..612
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=69049
     Region          37..586
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mkspwmrrva llaclatlpl aaiadaapas aaapvktlry ilpaaetgfd patardlysn
       61 hitqaifdtl ytydylarpv kvvpgaaaam pevsadgkty tirlkkgilf tpdaafggkr
      121 reltmadyvy swkrlfdprl asphswlfeg kvvglddlak eaaksnkfdy nkkvagleil
      181 dpytlrvtlt ktdfnfpmil ayvptaalar evvdkygdvk gevgsnpvgt gyytlgewtr
      241 gnrivlnrnt qhlpetwnfm agddpddqri vrqmqgkrip aidrieisvm iedqsrwlsf
      301 qsggtdvfwl dgplapkall ngklrpelae kgvqlsrlld peisyyywnm edptlggfsk
      361 ekialrraia mahnideeir iiwngqakrl dypippgvvg ydphyksllq ydpvlankll
      421 dkfgykkgad gwrtlpdgkp lliryasrne angvlqaemw rktynslgir mendrmifsd
      481 ilktekqckm qtrtapwlad ypdgdnfmql fygpnthqnn ngcyqdpeyd kwyaasqhmp
      541 asperdelyh kmarrlevna galigyaryr nmlaqktvqg ykkhpilfqe waymdidntg
      601 apvapvadpa kk
//
LOCUS       WP_258003028             653 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein
            [Janthinobacterium sp. AD80].
ACCESSION   WP_258003028
VERSION     WP_258003028.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. AD80
  ORGANISM  Janthinobacterium sp. AD80
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (residues 1 to 653)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Janthinobacterium sp. AD80"
                     /db_xref="taxon:1528773"
     Protein         1..653
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=70621
     Region          37..650
                     /region_name="TonB-B12"
                     /note="TonB-dependent vitamin B12 receptor; TIGR01779"
                     /db_xref="CDD:273802"
ORIGIN      
        1 maifdrhlqf pasvqsglrg rrlvayyllk iimthavsrh aaltslalai aapaafaqtt
       61 pdtfdpvivt atrtpqktse llantaiits eeisrsgags vtellqkqrg ievtrnggag
      121 taasvyirga nstqnivlvd gvrigsstlg tanwspvpla nidrieivyg plstlygada
      181 iggviqiftk kgsgapvvga svgfgsdatr qydasvsgat ggynslsysl nvskeksdgf
      241 satkpgnfsy nadkdgydkk svtgqvgfql akghdlglvf mnsklesqyd sgpgydtrsn
      301 qklenigvfm nnefvqgwhs kvqfaeardk anedtsagaa gkssletkqs tfdwqndiai
      361 gidtlqllas yrkeevvssa kpilnrardt kslaasytmk rdqhllnasl rrdkmsetgs
      421 tttgslgygy qinnalrata sygtsfrqpt ynelyypgyg iasnrpekgr naevglrydd
      481 gktqlsavyy hnrvtdlliy adtcpvevat hpfgcaynvn kallegitlt grrkfgdfgl
      541 sgnidlqdpr dqtldkslvr rakrhanfaa dysigqlntg aewqlsgkrf enpanttslg
      601 gyglvnlfat yqvaqdwsvl arwnnitdkk yelarnynta gsnffvgvry gmk
//
LOCUS       WP_258003064            1045 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-binding protein [Janthinobacterium sp. AD80].
ACCESSION   WP_258003064
VERSION     WP_258003064.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. AD80
  ORGANISM  Janthinobacterium sp. AD80
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024842.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13450.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Janthinobacterium sp. AD80"
                     /db_xref="taxon:1528773"
     Protein         1..1045
                     /product="NAD(P)-binding protein"
                     /calculated_mol_wt=115507
     Region          <114..>147
                     /region_name="ADC"
                     /note="Acetoacetate decarboxylase (ADC); cl01919"
                     /db_xref="CDD:445607"
     Region          324..>422
                     /region_name="COG3349"
                     /note="Uncharacterized protein, contains NAD-binding
                     domain and a Fe-S cluster [General function prediction
                     only]"
                     /db_xref="CDD:442577"
     Region          <985..1031
                     /region_name="COG3349"
                     /note="Uncharacterized protein, contains NAD-binding
                     domain and a Fe-S cluster [General function prediction
                     only]"
                     /db_xref="CDD:442577"
ORIGIN      
        1 mtakpsarps yiyqggsvmm hsplqlkqse mygyfvkgdl aklqatvntt lnqvagqrmt
       61 lkalspyvml tftrvnhads anpvdqakgw itevdivtwi mvgqmddagk lahiywypch
      121 ifvddamali ngrelfgypk ylceyeipaa gseplrcsva akgfqhfspe tklalhplle
      181 vnatvqtgph kpvnsfleli eqafkiflsi pdffdmdqag wadilsllrn pridqiflkq
      241 fpdsagvkav yqalvaapae inrlhsarll gyeyactvha fdsfpldqtl glqlgpqaai
      301 lpfnvnfdft ampgeelvdn sqiapekiai lgggvaamta ayyltnqpgw qnqhaitvyq
      361 lgwrlggkga sgrnaqagqr ieehglhiwf gfyanafkmi keayaslerp pgaplatwrd
      421 afkqhdyval sedvkgqwrn wsivfptlpg epgeggedit lwqmavamvg wieqwirqir
      481 qvadadariv rasasqgegv wpgwlrrlad evvgqadelg ldvglsvgal valvadlapd
      541 strhdqarhq llastlngir awlrlryral idgddelrrl ficldlgitv mkgmfqdgvf
      601 kngfdvindi dfrdwlrkhg gdeqfsvnsa pvrgfydlvf ayeggdfskp nieagtllra
      661 mariglaykg gimfkmqagm gdtiftplye vlqkrgvefk ffqrveelvp gagdiasiri
      721 teqvqlkdpa edyaplvnvk gldcwpsapd yaqldpaqaa llqekgvnle sywsdwpqqy
      781 qqafgqplpv tvlkkgvdfd kvvfgisigs lealcpqlla hsptlrltte kvktvatqay
      841 qvwlnknlsq mgwttqpqgq qpvlsaftep ydtwapmdql lahedwpagl epknvsyfcs
      901 afpvdsyppv tdtgfparca ekakqgalhq lereigalwa eagapgafpw qwlvdakagt
      961 gparfdsqyw ranvdpsery vmsvvgstqy rlatdqsgfs nlfltgdwir tginagcvea
     1021 avmagmqtsr amtgypaviq getdf
//
LOCUS       WP_258003095             110 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6916 family protein [Janthinobacterium sp. AD80].
ACCESSION   WP_258003095
VERSION     WP_258003095.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. AD80
  ORGANISM  Janthinobacterium sp. AD80
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047043.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21880.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Janthinobacterium sp. AD80"
                     /db_xref="taxon:1528773"
     Protein         1..110
                     /product="DUF6916 family protein"
                     /calculated_mol_wt=12228
ORIGIN      
        1 mfqphctrng ipgmmnvltl ehfaarvnet fislsdgnaa fvlkevrplp satlegmlrk
       61 pfslmfhnss ailfsqkifq mqheafgevg iflvpvards hgflyqaifn
//
LOCUS       WP_258003098             949 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein
            [Janthinobacterium sp. AD80].
ACCESSION   WP_258003098
VERSION     WP_258003098.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. AD80
  ORGANISM  Janthinobacterium sp. AD80
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (residues 1 to 949)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Janthinobacterium sp. AD80"
                     /db_xref="taxon:1528773"
     Protein         1..949
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=100648
     Region          33..948
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mhsafaqtee envtkvqvtg srltspnavs psplqiltsa diaasgatnl qelllknptl
       61 gtptisrtns nfqtasvgva tvdlrnlgts rtlvlvngrr fvsgipgesa vdmntiptdf
      121 iervelltgg asaaygsdav agvvniilkr nfngvlvdas lgqsdyhdds kkklaitfgt
      181 ssadgasnim ghfgyskqga vysrnrngtg vdnqskaait gdaadiftpi apfyssispq
      241 grffhdsgef tydkagnvip wstngsaala atgfnrnafr tiavpterfl fatngthafd
      301 enhsaffegt ysstkvtsri epfglqagdi fpdtgqvpag tlvngvvvrn plvpqylydr
      361 itdndgdgip dysfsrrlse vgtrgstaer dtfrlatglk gtikdwnyea fvsygktkea
      421 qnssgqvnvq nfrnallgtp dgnggvqcsd aiarlqgcvp inifgyntis pealkyvtap
      481 gslitsttqk iaggnvsgel felpagkvgl sggvewrqee ssstpdpltq aglnagnatp
      541 ptygkfsvke ayletlvpil knkflakqld fraayrvgdy stvghtnswn tgvewaptad
      601 vkfratrsis trapninely sppsqdfpsg ltdpclgvta stpgataaac ranpyvlani
      661 qangtfkqsq adlqgisgyn rgnpdlkaeq grsttvgvvl tprsipalsk ftftadyfdi
      721 kisdaivstp rqyalgqcyg ggnpafcsfi trraatsgdn nvgaltyids avsnsgglat
      781 egvdltaswa dmvgpgrlsa kiqythvkeg yviplkdadk tkeerdlfag eigaaknkan
      841 lnlaykwgsf gisstttfig asalddqyla qfdlpanaik vgsrtyqdfq ltfdvkkqvq
      901 lylgidnafd taapmilsgv tgnstgtntn agtydpigrr yyvgvrvtm
//
LOCUS       WP_258003112              59 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein, partial
            [Janthinobacterium sp. AD80].
ACCESSION   WP_258003112
VERSION     WP_258003112.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. AD80
  ORGANISM  Janthinobacterium sp. AD80
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024908.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13518.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..59
                     /organism="Janthinobacterium sp. AD80"
                     /db_xref="taxon:1528773"
     Protein         1..>59
                     /product="helix-turn-helix domain-containing protein"
     Region          4..>58
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
ORIGIN      
        1 mstrlefvll tqqpganiaa lcrnfgisrk taykwlerhr gqgnsglqdr srrphaspa
//
LOCUS       WP_258002378             258 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar hook capping FlgD N-terminal domain-containing protein
            [Burkholderia sp. WAC0059].
ACCESSION   WP_258002378
VERSION     WP_258002378.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. WAC0059
  ORGANISM  Burkholderia sp. WAC0059
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (residues 1 to 258)
  AUTHORS   Luo,M., Niu,S., Yin,Y., Huang,A. and Wang,D.
  TITLE     Cloning, purification, crystallization and preliminary X-ray
            studies of flagellar hook scaffolding protein FlgD from Pseudomonas
            aeruginosa PAO1
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 65 (Pt 8), 795-797
            (2009)
   PUBMED   19652342
REFERENCE   2  (residues 1 to 258)
  AUTHORS   Kuo,W.T., Chin,K.H., Lo,W.T., Wang,A.H. and Chou,S.H.
  TITLE     Crystal structure of the C-terminal domain of a flagellar
            hook-capping protein from Xanthomonas campestris
  JOURNAL   J Mol Biol 381 (1), 189-199 (2008)
   PUBMED   18599076
REFERENCE   3  (residues 1 to 258)
  AUTHORS   Ohnishi,K., Ohto,Y., Aizawa,S., Macnab,R.M. and Iino,T.
  TITLE     FlgD is a scaffolding protein needed for flagellar hook assembly in
            Salmonella typhimurium
  JOURNAL   J Bacteriol 176 (8), 2272-2281 (1994)
   PUBMED   8157595
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015896.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03963.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Burkholderia sp. WAC0059"
                     /db_xref="taxon:2066022"
     Protein         1..258
                     /product="flagellar hook capping FlgD N-terminal
                     domain-containing protein"
                     /calculated_mol_wt=25237
     Region          2..236
                     /region_name="FLgD_tudor"
                     /note="FlgD Tudor-like domain; cl29105"
                     /db_xref="CDD:452922"
ORIGIN      
        1 mttssstigg nsatvskqll dtmngtnsst ssssstssts dlqstflqll vtqlqnqdpt
       61 spmdssqmts qlaqietvtg vnqlntslqs lstqlnatqe assasligst vlapgseisv
      121 tsgndiafgv klanaatnvq vlvenssgqi vgtdnlgsls agttpvvwsp vdssgnalps
      181 gtyklvatgt ingetatatt ltpaivdaiv qqsngtagal lsnndtvslt slgailsags
      241 snsgsgsgsd sgssgsas
//
LOCUS       WP_258003146             168 aa            linear   BCT 02-MAR-2025
DEFINITION  winged helix-turn-helix domain-containing protein [Streptococcus
            pneumoniae].
ACCESSION   WP_258003146
VERSION     WP_258003146.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024980.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13592.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         1..168
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /calculated_mol_wt=19632
     Region          25..>145
                     /region_name="transpos_IS630"
                     /note="IS630 family transposase; NF033545"
                     /db_xref="CDD:468076"
ORIGIN      
        1 mkstkeeiqt iktllkdsrt akyhkrlqiv lfrlmgksyk eiielldcnq ttiwrnvkky
       61 eefgldsllq etrggrnhty mtveeekafl arhlkaaeag efvtidalfq aykkelgrsy
      121 trdafyqllk rhgwrnimpr pehpkkadaq tivvsknkis ikedkkal
//
LOCUS       WP_258003177             155 aa            linear   BCT 02-MAR-2025
DEFINITION  TolC family protein, partial [Janthinobacterium sp. AD80].
ACCESSION   WP_258003177
VERSION     WP_258003177.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. AD80
  ORGANISM  Janthinobacterium sp. AD80
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (residues 1 to 155)
  AUTHORS   Johnson,J.M. and Church,G.M.
  TITLE     Alignment and structure prediction of divergent protein families:
            periplasmic and outer membrane proteins of bacterial efflux pumps
  JOURNAL   J Mol Biol 287 (3), 695-715 (1999)
   PUBMED   10092468
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02321.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Janthinobacterium sp. AD80"
                     /db_xref="taxon:1528773"
     Protein         1..>155
                     /product="TolC family protein"
                     /GO_function="GO:0015562 - efflux transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          27..>154
                     /region_name="outer_NodT"
                     /note="efflux transporter, outer membrane factor (OMF)
                     lipoprotein, NodT family; TIGR01845"
                     /db_xref="CDD:273830"
ORIGIN      
        1 mkhvkpivss aparhllala aaallagcav sptyevptaa apqafkeaag wqpavpadtl
       61 ergpwwtlfg daqlnqlads idisnqnvaa aiasyeqara lvreqraslf psvnltgsgt
      121 rsggggeqqt annyraaiga swepdvwgkl ragvt
//
LOCUS       WP_258003239             231 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Janthinobacterium sp. AD80].
ACCESSION   WP_258003239
VERSION     WP_258003239.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. AD80
  ORGANISM  Janthinobacterium sp. AD80
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (residues 1 to 231)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Janthinobacterium sp. AD80"
                     /db_xref="taxon:1528773"
     Protein         1..231
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=24516
     Region          13..229
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 msphgnlpsg agtairvmlv ddhktmlwgl ekliegtpem clvgsagdad aalamaaamr
       61 phvivldldl ggscstdilp rlladgatra lvlsgtrsqe llgkavraga rgalgkeapa
      121 elllqvirkv hqgelwleqt llgsllgell apkappprnp edariaslta kerkivgmii
      181 dgngalnkdl aqrafiaeht lrnhlssiyh klgvsnrlel yvyatrhkic p
//
LOCUS       WP_258003250             508 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Janthinobacterium sp. AD80].
ACCESSION   WP_258003250
VERSION     WP_258003250.1
KEYWORDS    RefSeq.
SOURCE      Janthinobacterium sp. AD80
  ORGANISM  Janthinobacterium sp. AD80
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Janthinobacterium sp. AD80"
                     /db_xref="taxon:1528773"
     Protein         1..508
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=54033
     Region          30..450
                     /region_name="efflux_EmrB"
                     /note="drug resistance transporter, EmrB/QacA subfamily;
                     TIGR00711"
                     /db_xref="CDD:129794"
ORIGIN      
        1 msavplpgav paaaplpspt ifglrlatgl tgvllavmla glnenitkia ladirgamgi
       61 srddaswlva lyaaasvsam afapwcsvtf slrrltaaai ivcmaagllc pfapnlpmli
      121 ilrvvqgaag galppmlmtv alrflppnik lyglggyals atfgpslgtp laafwteslg
      181 wqwafwqvip gsivallmvs wglpqdplrl erlrqfdwrg lllglpaism lvvgmlqger
      241 lnwfhsplic vllgggavll vlflvnewsh plpffklqll srrnlshall tlggvlfvll
      301 avilipssyl aqvhgyrplq tapvmlmval pqlialplva alcniravdc rwvlaiglgm
      361 lavscvlgar mspdwirthf yllqavqifa qpmaviplll lattglapqd gpfasawfnt
      421 ikgmsavvat gvldalitrr nhfhstvlse rlgnlpaavd vpglaqrmha qvvtltssdl
      481 yltvaaiala miviipilpt rvfppraa
//
LOCUS       WP_258003326             968 aa            linear   BCT 02-MAR-2025
DEFINITION  putative Ig domain-containing protein, partial [Lactobacillus
            iners].
ACCESSION   WP_258003326
VERSION     WP_258003326.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus iners
  ORGANISM  Lactobacillus iners
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (residues 1 to 968)
  AUTHORS   Bentley,S.D., Maiwald,M., Murphy,L.D., Pallen,M.J., Yeats,C.A.,
            Dover,L.G., Norbertczak,H.T., Besra,G.S., Quail,M.A., Harris,D.E.,
            von Herbay,A., Goble,A., Rutter,S., Squares,R., Squares,S.,
            Barrell,B.G., Parkhill,J. and Relman,D.A.
  TITLE     Sequencing and analysis of the genome of the Whipple's disease
            bacterium Tropheryma whipplei
  JOURNAL   Lancet 361 (9358), 637-644 (2003)
   PUBMED   12606174
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017183.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05345.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..968
                     /organism="Lactobacillus iners"
                     /db_xref="taxon:147802"
     Protein         <1..968
                     /product="putative Ig domain-containing protein"
     Region          69..>264
                     /region_name="NHL"
                     /note="NHL repeat unit of beta-propeller proteins;
                     cl18310"
                     /db_xref="CDD:302697"
     Region          159..>453
                     /region_name="PspC_relate_1"
                     /note="PspC-related protein choline-binding protein 1;
                     NF033840"
                     /db_xref="CDD:411409"
     Region          754..853
                     /region_name="He_PIG"
                     /note="Putative Ig domain; pfam05345"
                     /db_xref="CDD:398814"
     Region          928..968
                     /region_name="Gram_pos_anchor"
                     /note="LPXTG cell wall anchor motif; pfam00746"
                     /db_xref="CDD:366278"
ORIGIN      
        1 ikgdkgdkgs dgkngesvkn ptiddkgdly vtvvdadgke ttkkighikg dkgdkgsdgk
       61 ngesvknpti dengdlyvtv vdadgkettk kighikgdkg dkgsdgknge svknptiddk
      121 gdlyvtvvda dgkettkkig hikgdkgdkg sdgkngesvk nptiddkgdl yvtvvdadgk
      181 ettkkighvk gsdgkdgkng esvknptidd kgdlyvtvvd adgkettkki ghikgdkgdk
      241 gsdgkngesv knptidengd lyvtvvdadg kettkkighi kgdkgdkgsd gkdgqsitna
      301 tidpntghli vtigegadak tvdagpakga dgktphikvs dkvngettit idgynddgta
      361 yrqevkvsdg ityapvatkg edgvttikfy pvdpktgkpd ktkqpvgsdv qvkdgvngkd
      421 gksvtsayvd aktghlmiti egqanpidag lvkglsakvd ikrneentgv ditvtqekwd
      481 nngnltkett tntvydgvgp kievaeqgns hiititdqir dregikdkpn akpqvievkd
      541 gkdgetptit kgegkdengh vfttvtftts kgsttvvipn gkdgrdgkdc qgtcgicdnr
      601 dfkpvkfdar yddgadlgri qlrfipvelg drpsnvtaav khtrsrrslg dqevanagll
      661 nlmatsvlvg sdreavdypa edktvqgpia ntykveglld gmifnpedat itgkakitdw
      721 kdgetkrrvp irvtvynsdg stkvaesdiv vtrtltskps vqgtstpdts ipnpgksmsy
      781 vgvvpgtrpy ytlkmigrpl pkgikfdstt gtftgtakvd dwqdgevsri ypfvvtvvnc
      841 dgkqykaeds itiyrkinpe papvpeptpv peptpvpept pvpepapvpe ptpvpeptpv
      901 pepapvpepm pvpeptpvpe kpvstdktpt sgkeklpqtg etsdiaslva alclaaglvv
      961 lpkkkeqd
//
LOCUS       WP_258003341             134 aa            linear   BCT 02-MAR-2025
DEFINITION  LicD family protein, partial [Streptococcus pneumoniae].
ACCESSION   WP_258003341
VERSION     WP_258003341.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 134)
  AUTHORS   Kuchta,K., Knizewski,L., Wyrwicz,L.S., Rychlewski,L. and
            Ginalski,K.
  TITLE     Comprehensive classification of nucleotidyltransferase fold
            proteins: identification of novel families and their
            representatives in human
  JOURNAL   Nucleic Acids Res 37 (22), 7701-7714 (2009)
   PUBMED   19833706
REFERENCE   2  (residues 1 to 134)
  AUTHORS   Zhang,J.R., Idanpaan-Heikkila,I., Fischer,W. and Tuomanen,E.I.
  TITLE     Pneumococcal licD2 gene is involved in phosphorylcholine metabolism
  JOURNAL   Mol Microbiol 31 (5), 1477-1488 (1999)
   PUBMED   10200966
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04991.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..134
                     /product="LicD family protein"
     Region          <1..114
                     /region_name="LicD"
                     /note="LicD family; cl01378"
                     /db_xref="CDD:470175"
ORIGIN      
        1 fcaqtipekh galmkwgsri llgltpkslr yriwkkaeke mtkydladcd gitelcsgpg
       61 ymrnkypits fednlflpfe gtempipigy dvylrtafgd ymtpppadkq vphhdtviad
      121 mdksytkykg eygg
//
LOCUS       WP_258003369             164 aa            linear   BCT 02-MAR-2025
DEFINITION  family 1 glycosylhydrolase, partial [Streptococcus pneumoniae].
ACCESSION   WP_258003369
VERSION     WP_258003369.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012457.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00232.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..>164
                     /product="family 1 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <1..164
                     /region_name="Glycosyl hydrolases"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     cl23725"
                     /db_xref="CDD:474034"
ORIGIN      
        1 gtflgyysed tlfhlnqile annssfiied gdleimkraa alntmfgmny yrsefireyk
       61 genrqefnst gikgqssfkl nalgefvkkp gipttdwdwn iypqglfdml lrikeeypqh
      121 pviyltengt alkevkpege ndiiddskri ryieqhlhkv lear
//
LOCUS       WP_258003394              49 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: TraX family protein, partial [Klebsiella pneumoniae
            complex].
ACCESSION   WP_258003394
VERSION     WP_258003394.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae complex
  ORGANISM  Klebsiella pneumoniae complex
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (residues 1 to 49)
  AUTHORS   Maneewannakul,K., Maneewannakul,S. and Ippen-Ihler,K.
  TITLE     Characterization of traX, the F plasmid locus required for
            acetylation of F-pilin subunits
  JOURNAL   J Bacteriol 177 (11), 2957-2964 (1995)
   PUBMED   7768788
REFERENCE   2  (residues 1 to 49)
  AUTHORS   Moore,D., Hamilton,C.M., Maneewannakul,K., Mintz,Y., Frost,L.S. and
            Ippen-Ihler,K.
  TITLE     The Escherichia coli K-12 F plasmid gene traX is required for
            acetylation of F pilin
  JOURNAL   J Bacteriol 175 (5), 1375-1383 (1993)
   PUBMED   8444800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017655.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05857.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..49
                     /organism="Klebsiella pneumoniae complex"
                     /db_xref="taxon:3390273"
     Protein         <1..49
                     /product="TraX family protein"
     Region          <2..46
                     /region_name="TraX"
                     /note="TraX protein; cl05434"
                     /db_xref="CDD:414418"
ORIGIN      
        1 esvaglaial ltlmvcssag ervkrfwprq ffvmfyavhl avlgivvsm
//
LOCUS       WP_258003415             751 aa            linear   BCT 02-MAR-2025
DEFINITION  ESPR-type extended signal peptide-containing protein, partial
            [Burkholderia pseudomallei].
ACCESSION   WP_258003415
VERSION     WP_258003415.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 751)
  AUTHORS   Leyton,D.L., Rossiter,A.E. and Henderson,I.R.
  TITLE     From self sufficiency to dependence: mechanisms and factors
            important for autotransporter biogenesis
  JOURNAL   Nat Rev Microbiol 10 (3), 213-225 (2012)
   PUBMED   22337167
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 751)
  AUTHORS   Desvaux,M., Scott-Tucker,A., Turner,S.M., Cooper,L.M., Huber,D.,
            Nataro,J.P. and Henderson,I.R.
  TITLE     A conserved extended signal peptide region directs
            posttranslational protein translocation via a novel mechanism
  JOURNAL   Microbiology (Reading) 153 (Pt 1), 59-70 (2007)
   PUBMED   17185535
REFERENCE   3  (residues 1 to 751)
  AUTHORS   Desvaux,M., Cooper,L.M., Filenko,N.A., Scott-Tucker,A.,
            Turner,S.M., Cole,J.A. and Henderson,I.R.
  TITLE     The unusual extended signal peptide region of the type V secretion
            system is phylogenetically restricted
  JOURNAL   FEMS Microbiol Lett 264 (1), 22-30 (2006)
   PUBMED   17020545
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024418.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13018.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>751
                     /product="ESPR-type extended signal peptide-containing
                     protein"
     Region          1..>40
                     /region_name="ESPR"
                     /note="Extended Signal Peptide of Type V secretion system;
                     pfam13018"
                     /db_xref="CDD:463773"
     Region          77..750
                     /region_name="Hia"
                     /note="Autotransporter adhesin [Intracellular trafficking,
                     secretion, and vesicular transport, Extracellular
                     structures]; COG5295"
                     /db_xref="CDD:444098"
ORIGIN      
        1 mnkiyrkvwn kargqlvvas elassrssvg easvdagrsg dqtgsaafts eernpgsgrm
       61 iplamgamlm fstpawaalv gaengtvnss dgtasttags gsaqasntgi afvgdvdcsa
      121 ftsgpgtyag vygsgsnylg glfgfgpqts masygdpsna ganagivawq gaaqtfgnvt
      181 yagngtqsgs htqafgmnsf aagcvahatg lsataigwgt tasgagsval glystasgqg
      241 slafgtsata tatdtialgt latanavsgv aigantqasa anataiggns sganlgaqat
      301 aagataiggn atagaaatat naiaiggqss akdandvavg lgaragtgsg agndlaigng
      361 atatggnsia qgagasanaa gavaigksas aaggqavsig vantasgnga vaigdpnvat
      421 gtgavalgnn ntangqgava lgnvstavgq gsvalgnssn aaaaggvalg dtasavmagg
      481 lalgslatas nandvalgag sktaaavats tvsvnganya vagsgpastv svgapgsert
      541 itnvaagqvs agstdavngs elyatnqait tglstanssi aslstststg lssansnigs
      601 lstglsttns tvaslststv aglnslstgl sttnsnvasl ssststglss ansavaslst
      661 ststglssan snigslstgl stanstvasl ssststgigs lstgvansvq ydspahtsit
      721 lggtsatspv kitnlaagan psdavnyeql t
//
LOCUS       WP_258003420             337 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Streptococcus
            pneumoniae].
ACCESSION   WP_258003420
VERSION     WP_258003420.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..337
                     /product="ABC transporter substrate-binding protein"
     Region          <12..264
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 tsktsdiekk stqeavlnkn frqainfafd rtsygaqseg kegatkilrn lvvppnfvsi
       61 kgkdfgevva skmvnygkew qginfadgqd pyynpdkaka kfaeakkele akgvqfpihl
      121 dktvevtdkv giqgvssikq siesvlgsdn vvidiqqlts defdssgyfa qtaaqkdydl
      181 yhggwgpdyq dpstyldifn tnsggvlqnl glepgeandk akavgldvyt qmleeankeq
      241 dpakryekya diqawlidss lvlpsvsrgg tpslrrtvpf aaaygltgtk gvesykylkv
      301 qdkivttdey akarekwlke keesnkkaqe elakhvk
//
LOCUS       WP_258003422             279 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258003422
VERSION     WP_258003422.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 279)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>279
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          110..>279
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mtandllall nskgialsvk gdnlaitgde kvledpglla llrankpali dlikdghgtv
       61 ggavrvppnr ipadaeriap eqltlvrldq geidalvarv dggaanvqdi yplvpmqegm
      121 lfhhllsqqg daylesylla frtrerldrf lsalqqvidr hdilrtaffw eglphsvqvv
      181 qrratlplnv veldprdgdv gqqlearydp rshridvgra plmqvhaahd aaggrwlvrl
      241 lshhlavdht tlervieear aieqgrvedl prpvpfrnf
//
LOCUS       WP_258003429             784 aa            linear   BCT 02-MAR-2025
DEFINITION  TcfC E-set like domain-containing protein [Enterobacter
            hormaechei].
ACCESSION   WP_258003429
VERSION     WP_258003429.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028277.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16967.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..784
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..784
                     /product="TcfC E-set like domain-containing protein"
                     /calculated_mol_wt=85376
     Region          <223..>536
                     /region_name="PRK15310"
                     /note="fimbrial outer membrane usher protein TcfC;
                     Provisional"
                     /db_xref="CDD:185210"
     Region          236..303
                     /region_name="TcfC"
                     /note="E-set like domain; pfam16967"
                     /db_xref="CDD:435681"
ORIGIN      
        1 mtlaanmral pedfrryfye sevmaqvyln dtllfeaais ltesgdvrli rtieesesvd
       61 sdvrnrwkev ldkgisvgec tnqcpsglma aeylldssil klytshyeta rtensfislp
      121 ekmpggmimy nditatnsdn trswginssl ttsllgwsqr vsfqssgtdg qyhyssstly
      181 elysqkelpg hfvrlgfftp dsdtgnvems gfgydtvvga mwgtsdalli ngdsvsawpv
      241 yvtgqnqsva evwrdgrlih tqqletgvqa ldtrrlpggi yditikiien gktvdtqqaq
      301 iykpqgwnnp dkrwrmnlwg gqqqtigtst rygndnphpa aagggidylv hprvvmgvsg
      361 aatenehqvr vrsnvtltps dslfaqyttg nndvqsnqnt diryyrtipg ggaaslywrs
      421 tttdvyghqt ryrqqgdtwg aslslrlpwt tsltvngqyt etawrqgfga dvatttlgtl
      481 agrnmnfrvs awdrpgfsng rrdqgmsvgl slslapssrh avsaetgmnq nhgysslsyq
      541 yqpdesstlr tvgggvsysa kntvfnangs vdtpfvsadg wvqhhtqnss ntaggnlsqv
      601 lmlgggklas ssgsasrstg aalivdvdsd hndigilasg kmsetrllpg rnvvpaeqwr
      661 keviqfsatg gdsvrvfpeq qsiqlnkgsv qyvqvkavkt ytlvgtlqdd qgellknrfv
      721 esdisgavin aegvltletg sknktlllre eggkpplkcs ipaadnagnn airfvedlkc
      781 svmn
//
LOCUS       WP_258003435             105 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Enterobacter hormaechei].
ACCESSION   WP_258003435
VERSION     WP_258003435.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025124.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13749.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Enterobacter hormaechei"
                     /db_xref="taxon:158836"
     Protein         1..105
                     /product="ATP-binding protein"
                     /calculated_mol_wt=11817
     Region          14..99
                     /region_name="HATPase_c_4"
                     /note="Putative ATP-dependent DNA helicase recG
                     C-terminal; pfam13749"
                     /db_xref="CDD:463975"
ORIGIN      
        1 mtalahrdwt rfveieigly snrfevispg alknsrsvek mvagqrsprn tiimevlrdy
       61 gyvdfrgmgv rtkiipltqa msgqlpdfta tddylktily rspss
//
LOCUS       WP_258003448             201 aa            linear   BCT 02-MAR-2025
DEFINITION  ESPR-type extended signal peptide-containing protein, partial
            [Burkholderia pseudomallei].
ACCESSION   WP_258003448
VERSION     WP_258003448.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 201)
  AUTHORS   Leyton,D.L., Rossiter,A.E. and Henderson,I.R.
  TITLE     From self sufficiency to dependence: mechanisms and factors
            important for autotransporter biogenesis
  JOURNAL   Nat Rev Microbiol 10 (3), 213-225 (2012)
   PUBMED   22337167
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 201)
  AUTHORS   Desvaux,M., Scott-Tucker,A., Turner,S.M., Cooper,L.M., Huber,D.,
            Nataro,J.P. and Henderson,I.R.
  TITLE     A conserved extended signal peptide region directs
            posttranslational protein translocation via a novel mechanism
  JOURNAL   Microbiology (Reading) 153 (Pt 1), 59-70 (2007)
   PUBMED   17185535
REFERENCE   3  (residues 1 to 201)
  AUTHORS   Desvaux,M., Cooper,L.M., Filenko,N.A., Scott-Tucker,A.,
            Turner,S.M., Cole,J.A. and Henderson,I.R.
  TITLE     The unusual extended signal peptide region of the type V secretion
            system is phylogenetically restricted
  JOURNAL   FEMS Microbiol Lett 264 (1), 22-30 (2006)
   PUBMED   17020545
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024418.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13018.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>201
                     /product="ESPR-type extended signal peptide-containing
                     protein"
     Region          1..>40
                     /region_name="ESPR"
                     /note="Extended Signal Peptide of Type V secretion system;
                     pfam13018"
                     /db_xref="CDD:463773"
     Region          156..>185
                     /region_name="YadA_stalk"
                     /note="Coiled stalk of trimeric autotransporter adhesin;
                     pfam05662"
                     /db_xref="CDD:428572"
ORIGIN      
        1 mnrifksiwc eqtrtwvaas ehavarggra ssvvasaggl ekvlklsilg aasliamgvv
       61 gpfaeeamaa nnagvcltyn gssnntsgtg gwfadgcksa gwvqgmvtns ktdwvgltad
      121 dtqivldgsa gsiyfrtggi ngnvltmsna tggvllsgla agvnptdavn msqltslsts
      181 tatgitslst statsiasls t
//
LOCUS       WP_258003455             296 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Burkholderia pseudomallei].
ACCESSION   WP_258003455
VERSION     WP_258003455.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 296)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 296)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 296)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 296)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..296
                     /product="ATP-binding protein"
     Region          <5..289
                     /region_name="PRK10337"
                     /note="sensor protein QseC; Provisional"
                     /db_xref="CDD:182388"
ORIGIN      
        1 vlsllpllai glwlgigygl rplgaiaagl krrhanrldp ldittvptea qplaseindl
       61 larldrsftl qrhfiadaah elrtpimgls iqtqllqrta saderarila qiqagttrls
      121 hlaeqlltla rlepearsap faeldlaalg rsvvaerari aaaqhvdlga lgtapvrvag
      181 nadtlrvlln nlvdnairya gagarvdvda ridaggtpvl evrdngpgip aadrervwer
      241 fyrgggaqlv sasgsglgls ivkriaeqhh advsleagad grgltvtvrf gaarqa
//
LOCUS       WP_258003551             791 aa            linear   BCT 02-MAR-2025
DEFINITION  CHASE2 domain-containing protein, partial [Fischerella muscicola].
ACCESSION   WP_258003551
VERSION     WP_258003551.1
KEYWORDS    RefSeq.
SOURCE      Fischerella muscicola
  ORGANISM  Fischerella muscicola
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 791)
  AUTHORS   Zhulin,I.B., Nikolskaya,A.N. and Galperin,M.Y.
  TITLE     Common extracellular sensory domains in transmembrane receptors for
            diverse signal transduction pathways in bacteria and archaea
  JOURNAL   J Bacteriol 185 (1), 285-294 (2003)
   PUBMED   12486065
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017076.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05226.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Fischerella muscicola"
                     /db_xref="taxon:92938"
     Protein         <1..791
                     /product="CHASE2 domain-containing protein"
     Region          153..381
                     /region_name="CHAT"
                     /note="CHAT domain; cl19248"
                     /db_xref="CDD:473154"
     Region          400..>781
                     /region_name="CHASE2"
                     /note="Extracytoplasmic sensor domain CHASE2 (specificity
                     unknown) [Signal transduction mechanisms]; COG4252"
                     /db_xref="CDD:443394"
ORIGIN      
        1 vgagefpisp pphlpisppp qspmtklivl kldgdfnqgf rvtleigseg erpeteiign
       61 lpsatevalm ysdwqsiyrs lskatrvikl kraridgslk kqreecrqqa selcdrlniw
      121 lraepffpir ekwlekvstt eevrliirae nyqlwqlpwq ewdllerysq veiglstles
      181 efspkaeksp irnqlkilai lgnsegiqve qdrqqllnlp naeitflvep qrqelndqlw
      241 eqhwdilffa ghsqtegekg riylnqtdsl tlnelryalq kavtnglqla ifnscdglgl
      301 arelkqlhip emivmrepvp dmvaqaflky flqafansks lytavqqarq rlqgledefp
      361 caswlpvicq npaakpliwv gqrrrtnprs fiwrslrtvl atslvvtsll mgvrsqgflq
      421 kwelasydyl lrqrppeead srllivgade edirkykypl pdgilarlit kleqyqpvai
      481 gldifrdqpv lpghdllvsq leqnqhliiv ctlgnttkns iapppkspas qlgfndlevd
      541 hqsdtirrql lsrtsnptss lspcktpyaf slqlagrylk ankipvsitv dkdwqfgkvv
      601 frrlqshsgg yqnldargnq ilinyrahsq iarrisieei ltgkfepewi nnkvvligvs
      661 aasvqdnhtt pygkmrgldi hahvvsqils avenqrpliw wlpqwgdalw ilawsviggv
      721 svllvrsqyl rqtestihlv valsitspcl ywiclrflih gywlpfipta lallltgvvi
      781 ayiplpkpee v
//
LOCUS       WP_258003612             121 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: phosphatase PAP2 family protein [Fischerella].
ACCESSION   WP_258003612
VERSION     WP_258003612.1
KEYWORDS    RefSeq.
SOURCE      Fischerella
  ORGANISM  Fischerella
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae.
REFERENCE   1  (residues 1 to 121)
  AUTHORS   Neuwald,A.F.
  TITLE     An unexpected structural relationship between integral membrane
            phosphatases and soluble haloperoxidases
  JOURNAL   Protein Sci 6 (8), 1764-1767 (1997)
   PUBMED   9260289
REFERENCE   2  (residues 1 to 121)
  AUTHORS   Stukey,J. and Carman,G.M.
  TITLE     Identification of a novel phosphatase sequence motif
  JOURNAL   Protein Sci 6 (2), 469-472 (1997)
   PUBMED   9041652
REFERENCE   3  (residues 1 to 121)
  AUTHORS   Messerschmidt,A. and Wever,R.
  TITLE     X-ray structure of a vanadium-containing enzyme: chloroperoxidase
            from the fungus Curvularia inaequalis
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 392-396 (1996)
   PUBMED   8552646
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013718.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01569.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Fischerella"
                     /db_xref="taxon:1190"
     Protein         1..121
                     /product="phosphatase PAP2 family protein"
                     /calculated_mol_wt=13124
     Region          <6..48
                     /region_name="PAP2_like"
                     /note="PAP2_like proteins, a super-family of histidine
                     phosphatases and vanadium haloperoxidases, includes type 2
                     phosphatidic acid phosphatase or lipid phosphate
                     phosphatase (LPP), Glucose-6-phosphatase,
                     Phosphatidylglycerophosphatase B and bacterial acid...;
                     cl00474"
                     /db_xref="CDD:469784"
ORIGIN      
        1 mtafgripav isvcivflvm larlylgvhy ladllggvai alilvvayqr fwpklvrwfs
       61 grtfqfflvl glsapiavlp ftsfsprgwe lfgyavglgn gftpatpsst rhsinslksc
      121 l
//
LOCUS       WP_258003675             481 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Fischerella
            muscicola].
ACCESSION   WP_258003675
VERSION     WP_258003675.1
KEYWORDS    RefSeq.
SOURCE      Fischerella muscicola
  ORGANISM  Fischerella muscicola
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 481)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Fischerella muscicola"
                     /db_xref="taxon:92938"
     Protein         1..>481
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          45..469
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation (C) domain of non-ribosomal
                     peptide synthetases(NRPSs) and similar domains including
                     the C-domain of SgcC5, a free-standing NRPS with both
                     ester- and amide- bond forming activity; cd19531"
                     /db_xref="CDD:380454"
ORIGIN      
        1 mrdlyqqiae lspdqralfe krlqqkglns ikisrisqrk dsdslplsfa qqrlwfiqql
       61 dpdnsaynvf salriqgqln vavleqtfte ivrrhetlrt tfttnasgep iqvitppqtl
      121 tlpimdltev snleeevqql vvkeaqqpfd ltkpllrltl lrldaaehvl lltvhhiicd
      181 rwsmgifvre mkalyeafvn skpsplpelp iqypdwaiwq rqwlqgqvle eqlnywqkql
      241 qgnlpvlklp sdrprpvvpt yqgsqqslvl skplsdavkd lskkegvtlf tllltafnil
      301 lfkythqddi ivgtdianrn rvetegligf lintlvlrts lsgnpsfrel lhrvrevmqg
      361 ayahqdlpfe klveelnper slsqmtplfq vkfdlqlaqv eppelsgltv splafdngta
      421 kfelrfnlsd teqgitglve ystdlfndst itrmvqhfqt llsgivanpe qrleelplls
      481 e
//
LOCUS       WP_258003709             101 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase family protein, partial
            [Burkholderia pseudomallei].
ACCESSION   WP_258003709
VERSION     WP_258003709.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 101)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00725.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..101
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
     Region          <1..94
                     /region_name="fadB"
                     /note="fatty acid oxidation complex subunit alpha FadB;
                     PRK11730"
                     /db_xref="CDD:183293"
ORIGIN      
        1 aftdeeivrr ylaaminega nvvhekialr pldvdavflh gygfprhrgg pmhyadtvgl
       61 anvladiraf agedpvfwkp spllvdlvar getfaslnri d
//
LOCUS       WP_258003742             329 aa            linear   BCT 02-MAR-2025
DEFINITION  pentapeptide repeat-containing protein [Fischerella thermalis].
ACCESSION   WP_258003742
VERSION     WP_258003742.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 329)
  AUTHORS   Bateman,A., Murzin,A.G. and Teichmann,S.A.
  TITLE     Structure and distribution of pentapeptide repeats in bacteria
  JOURNAL   Protein Sci 7 (6), 1477-1480 (1998)
   PUBMED   9655353
REFERENCE   2  (residues 1 to 329)
  AUTHORS   Kieselbach,T., Mant,A., Robinson,C. and Schroder,W.P.
  TITLE     Characterisation of an Arabidopsis cDNA encoding a thylakoid lumen
            protein related to a novel 'pentapeptide repeat' family of proteins
  JOURNAL   FEBS Lett 428 (3), 241-244 (1998)
   PUBMED   9654141
REFERENCE   3  (residues 1 to 329)
  AUTHORS   Black,K., Buikema,W.J. and Haselkorn,R.
  TITLE     The hglK gene is required for localization of heterocyst-specific
            glycolipids in the cyanobacterium Anabaena sp. strain PCC 7120
  JOURNAL   J Bacteriol 177 (22), 6440-6448 (1995)
   PUBMED   7592418
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013003.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00805.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..329
                     /product="pentapeptide repeat-containing protein"
                     /calculated_mol_wt=35167
     Region          22..60
                     /region_name="Pentapeptide"
                     /note="Pentapeptide repeats (8 copies); pfam00805"
                     /db_xref="CDD:459943"
     Region          48..239
                     /region_name="YjbI"
                     /note="Uncharacterized conserved protein YjbI, contains
                     pentapeptide repeats [Function unknown]; COG1357"
                     /db_xref="CDD:440968"
     Region          <184..303
                     /region_name="PRK15197"
                     /note="type III secretion system effector PipB"
                     /db_xref="CDD:185119"
ORIGIN      
        1 mnqnifqkki nqeiigqdln taslilanls haelvgvnls naylnganls ganlseanln
       61 yanlsdanls gtnlssvqlv sanlssvqli gadlsnanle hsnlssadls naelvgvnls
      121 sanlsdarfm sanltkanls gvylwngnln naklvntdls naymssakln hanlscavlk
      181 naqlsgaklr nanlknanlc gtqllgarld yanleganle ganlegadlh ganlsganlk
      241 svkinqatkl dykwrlvwei lnhknkhtdl rntdfedanl qgadlrntdl sdvkftrakv
      301 dnalfgynqg lslemklelk lrgavfede
//
LOCUS       WP_258003744             477 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Fischerella thermalis].
ACCESSION   WP_258003744
VERSION     WP_258003744.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..477
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=53016
     Region          23..411
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mntlnslslv kslemqssqp tyalisvhgd ptaeigkega ggqniyvrel glalvklgcq
       61 vdiftrrehp nqeeivqlap gcrtirlsag pakfisrnel fehlpefvea wlnfyqrtgr
      121 kyalihtnyw lsgwvglklk aklgfaqiht yhsigavkyr dvqntpqial irhhverail
      181 eqtdcviats pqeaedlrqf isqhgrikii pcgidtehfs svskevarqq lgiapdsrii
      241 myvgrfdprk gvetlvkack nlsepfklyl vggsredgad fqeqlriqal vkklgleait
      301 vftgrisqqi lptyyaagdi cvvpsyyepf glvaieamaa gtpviasevg glqhtvvhge
      361 tgllvppcns nalaiairhl ledptlrqry gnaarhwvrs rfstqavttq iyelyqsltl
      421 atfvqeiiqt kkltpnlerq vqtllksnal ksseikalek lidsfsngtv qwlnsns
//
LOCUS       WP_258003813             416 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Fischerella thermalis].
ACCESSION   WP_258003813
VERSION     WP_258003813.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..416
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=48135
     Region          29..396
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mlvsiflllh nfnsnilkhr amakkkigml iyanpdhypp tinavhllse hfdvvligrn
       61 qdpaiwkyps nvkvhrlgky tsvrerekqs leaklweyin fvaqaqnllk dvsliyaydy
      121 faytvayfcl rlqpkgipli yhnhdlnekl fplsslsgwv qrgerkwvhk anfvifpsqe
      181 ralffkkltn flgktmvvpn fprksyfqeh pnfpnlller fhnpqillqg tisvknslle
      241 liesldflnq sieikligyi qevdklvirn fsitknvaer vkyfppvpyn dlpphtwkas
      301 lgvclykktg inhqtmgtas nkiyeyaacg lpvivsdqpn yrehlasesw vrfadpdnpk
      361 siasavedim sdfdkyqamc laarqafeek ynyesafypl fkkiqelvcg sevkne
//
LOCUS       WP_258003814             176 aa            linear   BCT 02-MAR-2025
DEFINITION  cbb3-type cytochrome c oxidase subunit I [Fischerella thermalis].
ACCESSION   WP_258003814
VERSION     WP_258003814.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 176)
  AUTHORS   Gopalasingam,C.C., Johnson,R.M., Chiduza,G.N., Tosha,T.,
            Yamamoto,M., Shiro,Y., Antonyuk,S.V., Muench,S.P. and Hasnain,S.S.
  TITLE     Dimeric structures of quinol-dependent nitric oxide reductases
            (qNORs) revealed by cryo-electron microscopy
  JOURNAL   Sci Adv 5 (8), eaax1803 (2019)
   PUBMED   31489376
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 176)
  AUTHORS   Tsukihara,T., Aoyama,H., Yamashita,E., Tomizaki,T., Yamaguchi,H.,
            Shinzawa-Itoh,K., Nakashima,R., Yaono,R. and Yoshikawa,S.
  TITLE     The whole structure of the 13-subunit oxidized cytochrome c oxidase
            at 2.8 A
  JOURNAL   Science 272 (5265), 1136-1144 (1996)
   PUBMED   8638158
REFERENCE   3  (residues 1 to 176)
  AUTHORS   Castresana,J., Lubben,M., Saraste,M. and Higgins,D.G.
  TITLE     Evolution of cytochrome oxidase, an enzyme older than atmospheric
            oxygen
  JOURNAL   EMBO J 13 (11), 2516-2525 (1994)
   PUBMED   8013452
REFERENCE   4  (residues 1 to 176)
  AUTHORS   Papa,S., Capitanio,N., Glaser,P. and Villani,G.
  TITLE     The proton pump of heme-copper oxidases
  JOURNAL   Cell Biol Int 18 (5), 345-355 (1994)
   PUBMED   8049679
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012343.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00115.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..176
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /GO_process="GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /calculated_mol_wt=19692
     Region          <1..157
                     /region_name="NorB"
                     /note="Nitric oxide reductase large subunit [Inorganic ion
                     transport and metabolism]; COG3256"
                     /db_xref="CDD:442487"
ORIGIN      
        1 mplkffmatc fwnlvgagvf gflinppivl yysqglnttp ihahaalygv ygslaialml
       61 falreitpdh awdeknlnfs fwwiniglvv mmvfglipng fyqlvqsinh gtwyarsaav
      121 isspwmqwtv wlripgdiif tvgammliyc fgravvgifq qptqaplpev eltktv
//
LOCUS       WP_258003818             161 aa            linear   BCT 02-MAR-2025
DEFINITION  NACHT domain-containing protein [Fischerella thermalis].
ACCESSION   WP_258003818
VERSION     WP_258003818.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 161)
  AUTHORS   Koonin,E.V. and Aravind,L.
  TITLE     The NACHT family - a new group of predicted NTPases implicated in
            apoptosis and MHC transcription activation
  JOURNAL   Trends Biochem Sci 25 (5), 223-224 (2000)
   PUBMED   10782090
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017539.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05729.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..161
                     /product="NACHT domain-containing protein"
                     /calculated_mol_wt=17847
     Region          1..>123
                     /region_name="NACHT"
                     /note="Predicted NTPase, NACHT family domain [Signal
                     transduction mechanisms]; COG5635"
                     /db_xref="CDD:444362"
ORIGIN      
        1 mvicgeggvg ktslacqiar waiaetkdqr lcehlmlpvl leeefrvveg ksslleairg
       61 qlqalidepe pvcvelltql lrkqriiviv drfselnatt rkaivpdspe fpvnalvits
      121 rieeklgrvn ktiikplrie anklssfmea ylmaiailpq s
//
LOCUS       WP_258003348             302 aa            linear   BCT 02-MAR-2025
DEFINITION  5-methylcytosine restriction system specificity protein McrC,
            partial [Streptococcus pneumoniae].
ACCESSION   WP_258003348
VERSION     WP_258003348.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 302)
  AUTHORS   Zheng,L. and Braymer,H.D.
  TITLE     Overproduction and purification of McrC protein from Escherichia
            coli K-12
  JOURNAL   J Bacteriol 173 (12), 3918-3920 (1991)
   PUBMED   2050643
  REMARK    Erratum:[J Bacteriol 1991 Sep;173(18):5933]
REFERENCE   2  (residues 1 to 302)
  AUTHORS   Dila,D., Sutherland,E., Moran,L., Slatko,B. and Raleigh,E.A.
  TITLE     Genetic and sequence organization of the mcrBC locus of Escherichia
            coli K-12
  JOURNAL   J Bacteriol 172 (9), 4888-4900 (1990)
   PUBMED   2203735
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021622.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10117.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..302
                     /product="5-methylcytosine restriction system specificity
                     protein McrC"
     Region          <1..243
                     /region_name="McrBC"
                     /note="McrBC 5-methylcytosine restriction system
                     component; cl01737"
                     /db_xref="CDD:470319"
ORIGIN      
        1 aairkglyke yhrfshndsh vkgvidvrnh lkknlpftgn iayttrefty dnplmqlvrh
       61 tieyiknqks igqgvldnls tsrenvseiv rvtpsyklad rakiirgnqs kpirhayfhe
      121 yrnlqelclm ilnqekhglg yqdqkiygil fdvawlweey vytllpkgfv hprnkdktdg
      181 isvffvgkrk vypdfydrer kivldakykk leltekginr edlfqlisys yilktekagl
      241 ifpsmeqsvn seigkvagyg aqlkkwsiri pqnassysaf ckmmenseen fkaiideevg
      301 rk
//
LOCUS       WP_258003820              27 aa            linear   BCT 02-MAR-2025
DEFINITION  pentapeptide repeat-containing protein [Fischerella thermalis].
ACCESSION   WP_258003820
VERSION     WP_258003820.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 27)
  AUTHORS   Bateman,A., Murzin,A.G. and Teichmann,S.A.
  TITLE     Structure and distribution of pentapeptide repeats in bacteria
  JOURNAL   Protein Sci 7 (6), 1477-1480 (1998)
   PUBMED   9655353
REFERENCE   2  (residues 1 to 27)
  AUTHORS   Kieselbach,T., Mant,A., Robinson,C. and Schroder,W.P.
  TITLE     Characterisation of an Arabidopsis cDNA encoding a thylakoid lumen
            protein related to a novel 'pentapeptide repeat' family of proteins
  JOURNAL   FEBS Lett 428 (3), 241-244 (1998)
   PUBMED   9654141
REFERENCE   3  (residues 1 to 27)
  AUTHORS   Black,K., Buikema,W.J. and Haselkorn,R.
  TITLE     The hglK gene is required for localization of heterocyst-specific
            glycolipids in the cyanobacterium Anabaena sp. strain PCC 7120
  JOURNAL   J Bacteriol 177 (22), 6440-6448 (1995)
   PUBMED   7592418
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013003.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00805.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..27
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..27
                     /product="pentapeptide repeat-containing protein"
                     /calculated_mol_wt=2773
ORIGIN      
        1 migvdfsgan irgcdftnal lqdanfn
//
LOCUS       WP_258003869             178 aa            linear   BCT 02-MAR-2025
DEFINITION  IS66 family transposase, partial [Stutzerimonas stutzeri].
ACCESSION   WP_258003869
VERSION     WP_258003869.1
KEYWORDS    RefSeq.
SOURCE      Stutzerimonas stutzeri (Pseudomonas stutzeri)
  ORGANISM  Stutzerimonas stutzeri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Stutzerimonas.
REFERENCE   1  (residues 1 to 178)
  AUTHORS   Schwedock,J. and Long,S.R.
  TITLE     An open reading frame downstream of Rhizobium meliloti nodQ1 shows
            nucleotide sequence similarity to an Agrobacterium tumefaciens
            insertion sequence
  JOURNAL   Mol Plant Microbe Interact 7 (1), 151-153 (1994)
   PUBMED   8167368
REFERENCE   2  (residues 1 to 178)
  AUTHORS   Machida,Y., Sakurai,M., Kiyokawa,S., Ubasawa,A., Suzuki,Y. and
            Ikeda,J.E.
  TITLE     Nucleotide sequence of the insertion sequence found in the T-DNA
            region of mutant Ti plasmid pTiA66 and distribution of its
            homologues in octopine Ti plasmid
  JOURNAL   Proc Natl Acad Sci U S A 81 (23), 7495-7499 (1984)
   PUBMED   6095299
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015038.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03050.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Stutzerimonas stutzeri"
                     /db_xref="taxon:316"
     Protein         <1..178
                     /product="IS66 family transposase"
     Region          <43..153
                     /region_name="transpos_IS66"
                     /note="IS66 family transposase; NF033517"
                     /db_xref="CDD:468053"
ORIGIN      
        1 aclrhraskt tkrccrgtar qllpllpenk pvrqdgvyga ltqrsqplld qlkawldktq
       61 pqvagqtalg kavnylasnw srlvryiegg hlpidnnrae nairpfvigr knwlfsdtpk
      121 gatasaqiys lietakangq epyawlrhil erlpaaqsve dyeallpwnc spasasas
//
LOCUS       WP_258003900              80 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Fischerella thermalis].
ACCESSION   WP_258003900
VERSION     WP_258003900.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..80
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=9229
     Region          24..>80
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
ORIGIN      
        1 miygllkykv rqivsyihdy ldqnltltkl ssvvhisphy faslfkqstg lsshqhvmkc
       61 rierakqlll kreltiveis
//
LOCUS       WP_258003963             412 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Fischerella thermalis].
ACCESSION   WP_258003963
VERSION     WP_258003963.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 412)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..412
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=45018
     Region          <7..60
                     /region_name="GAF"
                     /note="Domain present in phytochromes and cGMP-specific
                     phosphodiesterases; smart00065"
                     /db_xref="CDD:214500"
     Region          <37..411
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
ORIGIN      
        1 mlsqfqvran lvvpllkgee lwglfcihqc sgprhwqqte vefvqqiaaq lniaiqqgey
       61 iqqlqkqslq laeaahreki akerlqqevi vlltvvrpal tgdltvrapv tdtevgtiad
      121 aynntlsslr qivtqmqsaa sqvtqisqan gsaitrlath aqeqfqaleq aleriqmmvt
      181 steavklnay qveaavqqan qtvmagdaai drtvdemedi retvmetnqr llrlsessqk
      241 isrvinliss fttqtqllal nasieatrag efgrgfgvva devrslarqs anaateieel
      301 vqeiqlntae vsramemgiq qvasgttvvn earhnlnaim nataqiselv tgithatqeq
      361 tqqcqslsqt mtkvaaiank tskdsvtisa sfkellataq dlqakseqfk vs
//
LOCUS       WP_258004013             262 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258004013
VERSION     WP_258004013.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 262)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>262
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          3..53
                     /region_name="TubC_N"
                     /note="TubC N-terminal docking domain; pfam18563"
                     /db_xref="CDD:436580"
     Region          98..>262
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mnvnslldll qrknirihvd rdelvvrapr galnaeltqa lkkskaelid vlrrrgaqas
       61 pdpvritpaq ltlvalsqes idalvtkveg gaanvqdiyp laplqegilf hhlmsgesdp
      121 yvlsgvlafr srevmerfvs alqqvidrhd ilrtgffweg leqpvqvvqr ratlpvsvve
      181 ldaregdivr qlearfdsrg yrmdvsrapl mhvhaacdge herwvarvlf hhlsidhttl
      241 ervieearai gqgrvenlpq pv
//
LOCUS       WP_258004068             345 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Klebsiella pneumoniae].
ACCESSION   WP_258004068
VERSION     WP_258004068.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 345)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>345
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          1..>342
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 mrlfiaekps lakaifeglg gnpntekkng yfehgsdvvt wcyghmlely dpqdyddkys
       61 nwrysdlpik avyppkykik peseaqtrii lslidkadsi vhsgdpddeg cllvdeilgy
      121 agnkkpvqrl lvadlnlapv qkslsnlqpn dkfrgmtlsa larslcdqgf gynmtrgctl
      181 kgrekgydgv lnvgrvqsav lglvnmrtla nqnhtesfyy dvfaslsmng hqikakyqtt
      241 dddqidekkr liseaqaahi agrvtgkdai vtiattkpen skpplplnls tlqqlcakrf
      301 gysakdtldv mqglyethkl ltyprsdnry lsdehyyqag diata
//
LOCUS       WP_258004075              46 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: colicin E3/pyocin S6 family cytotoxin, partial
            [Klebsiella].
ACCESSION   WP_258004075
VERSION     WP_258004075.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella
  ORGANISM  Klebsiella
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae.
REFERENCE   1  (residues 1 to 46)
  AUTHORS   Carr,S., Walker,D., James,R., Kleanthous,C. and Hemmings,A.M.
  TITLE     Inhibition of a ribosome-inactivating ribonuclease: the crystal
            structure of the cytotoxic domain of colicin E3 in complex with its
            immunity protein
  JOURNAL   Structure 8 (9), 949-960 (2000)
   PUBMED   10986462
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020569.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09000.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..46
                     /organism="Klebsiella"
                     /db_xref="taxon:570"
     Protein         <1..46
                     /product="colicin E3/pyocin S6 family cytotoxin"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /GO_function="GO:0043022 - ribosome binding [Evidence
                     IEA]"
     Region          <1..43
                     /region_name="Cytotoxic"
                     /note="pfam09000"
                     /db_xref="CDD:401084"
ORIGIN      
        1 iyewdsqhge legyrasdge hlgafdpktg kqvkgpdpkr nikkyl
//
LOCUS       WP_258004177             160 aa            linear   BCT 02-MAR-2025
DEFINITION  Fic family protein [Gardnerella vaginalis].
ACCESSION   WP_258004177
VERSION     WP_258004177.1
KEYWORDS    RefSeq.
SOURCE      Gardnerella vaginalis
  ORGANISM  Gardnerella vaginalis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Gardnerella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF045016.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21247.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Gardnerella vaginalis"
                     /db_xref="taxon:2702"
     Protein         1..160
                     /product="Fic family protein"
                     /calculated_mol_wt=17957
     Region          <7..59
                     /region_name="HATPase_c_4"
                     /note="Putative ATP-dependent DNA helicase recG
                     C-terminal; pfam13749"
                     /db_xref="CDD:463975"
ORIGIN      
        1 mnlktfkpfa knppiakvfr eigladelgs gmrnsykytk mysggepvft eadvfttvip
       61 lseaatakvg pitqgtpqvv pqdthqvtpq dleqrllrli dfcstprskr emmdylgltd
      121 sknfrerylv pllsagkiem tipdkpnsrn qkykkvnied
//
LOCUS       WP_258003781              57 aa            linear   BCT 02-MAR-2025
DEFINITION  catalase-related domain-containing protein [Fischerella thermalis].
ACCESSION   WP_258003781
VERSION     WP_258003781.1
KEYWORDS    RefSeq.
SOURCE      Fischerella thermalis
  ORGANISM  Fischerella thermalis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (residues 1 to 57)
  AUTHORS   Guy,B., Krell,T., Sanchez,V., Kennel,A., Manin,C. and Sodoyer,R.
  TITLE     Do Th1 or Th2 sequence motifs exist in proteins? Identification of
            amphipatic immunomodulatory domains in Helicobacter pylori catalase
  JOURNAL   Immunol Lett 96 (2), 261-275 (2005)
   PUBMED   15585332
REFERENCE   2  (residues 1 to 57)
  AUTHORS   Bai,J. and Cederbaum,A.I.
  TITLE     Mitochondrial catalase and oxidative injury
  JOURNAL   Biol Signals Recept 10 (3-4), 189-199 (2001)
   PUBMED   11351128
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018351.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06628.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..57
                     /organism="Fischerella thermalis"
                     /db_xref="taxon:372787"
     Protein         1..57
                     /product="catalase-related domain-containing protein"
                     /calculated_mol_wt=6178
     Region          <1..48
                     /region_name="catalase_like"
                     /note="Catalase-like heme-binding proteins and protein
                     domains; cl09506"
                     /db_xref="CDD:471888"
ORIGIN      
        1 mlpedekhrl fnniadsmkg vpqfiierql ahfakadpay tegvaqalsk avaakqi
//
LOCUS       WP_258004289             900 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Gardnerella vaginalis].
ACCESSION   WP_258004289
VERSION     WP_258004289.1
KEYWORDS    RefSeq.
SOURCE      Gardnerella vaginalis
  ORGANISM  Gardnerella vaginalis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Gardnerella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Gardnerella vaginalis"
                     /db_xref="taxon:2702"
     Protein         1..>900
                     /product="Ig-like domain-containing protein"
     Region          <529..>647
                     /region_name="hyperosmo_Ebh"
                     /note="hyperosmolarity resistance protein Ebh, N-terminal
                     domain; TIGR04264"
                     /db_xref="CDD:275090"
     Region          793..866
                     /region_name="Big_6"
                     /note="Bacterial Ig domain; pfam17936"
                     /db_xref="CDD:465576"
ORIGIN      
        1 mtsvnpskst ssskssrkrs ahkvhtlpla tmaalltaat clgsqpamav tantittpty
       61 tataekltsg tvakyqdrey vplgdkkpwl qypnilefrr lrgrnsnate iksdeegsds
      121 dwkavndrta myahvetrgg sdylvfdiff nnnaksmvdk snkqwylwqv pyaiadldsn
      181 glyksdtvtn lrydayrpkt kghilsqdpe afqkddslsf svpnmnktdq hfgkkgyaly
      241 qvgiglnpgd klytdldqif hqngndplis rmagdqatya fnngsqynkn ygfgitvakp
      301 yddvayhmha elklrpgvin ksadnyndky aniqnawtwa nsgswgktts saytvisgrd
      361 pnndadkdgk lkrnktdsia pkiyyngnei tgdnqtinly kgdklsfttt ddkgyiekfs
      421 isgltktpki kqgagsesnp lssdgikvtk emkdkevtit sedgsgnvtt rkvkvtvtkk
      481 ktladehpit gktidvtvgd qlpplteidk lveitdgdnl kdkptlkwng tatpntdkvg
      541 vftpsikgey sdksksftnv tinvkpqkpv ietdltdlag rtgqkvtvsv gsgiptgakv
      601 tttvklfdkn gneigsttti ngdkaeitvn geipegnvya tttvtkpden spkgikipgf
      661 kltsensekk qatkpkdten ptitatsspv tvgqdlkihi vakddvqvkd intiqalkga
      721 nllqdtdlts grasvskttd tdqkqvldlt iknmqpkevg thtltftvtd sagntgtttl
      781 titvkpavse qktenktgkd kttvsgkatp gakvtiskng qtvgettakd dgtftvdidk
      841 qdpntkltlt pskdgatgtp vettvtgetp aagkpavseq kaenktgkdx xxvsrslihi
//
LOCUS       WP_258004295             283 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein,
            partial [Gardnerella vaginalis].
ACCESSION   WP_258004295
VERSION     WP_258004295.1
KEYWORDS    RefSeq.
SOURCE      Gardnerella vaginalis
  ORGANISM  Gardnerella vaginalis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Gardnerella.
REFERENCE   1  (residues 1 to 283)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Gardnerella vaginalis"
                     /db_xref="taxon:2702"
     Protein         <1..283
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
     Region          <1..232
                     /region_name="MrcB"
                     /note="Penicillin-binding protein 1B/1F, peptidoglycan
                     transglycosylase/transpeptidase [Cell
                     wall/membrane/envelope biogenesis]; COG0744"
                     /db_xref="CDD:440507"
ORIGIN      
        1 nnfanisygt idmyqataks vntpymalqq klgthviaqt avaaglspkr itgdnpftvl
       61 gndsvhvsem vkaystfank gnrpdlhivs kvknsenkdi yttpitikqv fssnnaslaa
      121 kamlgtvqhg tapearslgr piagksgtan dqtavsfigf tpnvvtvfam wypdsngnpq
      181 viptlpggyg lsgsalpvhl ftlymrnals dvpvesfpsa kdngkiggpd gtwglgsvvs
      241 esdsdsksds ksdsksdsks ktesdsdses kseksqekst ekd
//
LOCUS       WP_258004109             126 aa            linear   BCT 02-MAR-2025
DEFINITION  colicin E3/pyocin S6 family cytotoxin, partial [Serratia
            marcescens].
ACCESSION   WP_258004109
VERSION     WP_258004109.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 126)
  AUTHORS   Carr,S., Walker,D., James,R., Kleanthous,C. and Hemmings,A.M.
  TITLE     Inhibition of a ribosome-inactivating ribonuclease: the crystal
            structure of the cytotoxic domain of colicin E3 in complex with its
            immunity protein
  JOURNAL   Structure 8 (9), 949-960 (2000)
   PUBMED   10986462
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020569.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09000.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         <1..126
                     /product="colicin E3/pyocin S6 family cytotoxin"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /GO_function="GO:0043022 - ribosome binding [Evidence
                     IEA]"
     Region          40..123
                     /region_name="Cytotoxic"
                     /note="pfam09000"
                     /db_xref="CDD:401084"
ORIGIN      
        1 sgldpiyvmf nkprkkpare dkpelikpre gtperghkyh papktdeikg lgelkagrpk
       61 tpkqsgggrr arwygdkgrk iyewdsqhge legyrasdge hlgafdpktg kqlkspdpkr
      121 nikkyl
//
LOCUS       WP_258004314             460 aa            linear   BCT 02-MAR-2025
DEFINITION  4Fe-4S dicluster domain-containing protein [Vibrio diazotrophicus].
ACCESSION   WP_258004314
VERSION     WP_258004314.1
KEYWORDS    RefSeq.
SOURCE      Vibrio diazotrophicus
  ORGANISM  Vibrio diazotrophicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024924.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13534.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Vibrio diazotrophicus"
                     /db_xref="taxon:685"
     Protein         1..460
                     /product="4Fe-4S dicluster domain-containing protein"
                     /calculated_mol_wt=49923
     Region          <14..354
                     /region_name="RnfC"
                     /note="Na+-translocating ferredoxin:NAD+ oxidoreductase
                     RNF, RnfC subunit [Energy production and conversion];
                     COG4656"
                     /db_xref="CDD:443694"
     Region          390..>452
                     /region_name="RnfC"
                     /note="Na+-translocating ferredoxin:NAD+ oxidoreductase
                     RNF, RnfC subunit [Energy production and conversion];
                     COG4656"
                     /db_xref="CDD:443694"
ORIGIN      
        1 mtltnsmtet keaplremks lsaekiadia resgivgagg agfptyvklq skaeiflvna
       61 aecepmlkvd qqlmvshvce liqgirygmk atgakegiia lkakykkaia tltplltnni
      121 rihilpdvyp agdevitiwl atgrrvppaq ipisigvvvn nvqtlinlak aideekpvth
      181 rtltingavn kpmtltvpig tkmseliela ggctvdnpef inggpmmgky isdidapvtk
      241 ttggilvfpr ehlliqrrlk tdqqiiamak tvceqcrlct dlcprhiigh elsphelvks
      301 msykqfakps tllsaltcse csvcesyacp veispmrinq ilkgelraqk akyegeiepq
      361 dpmaehrlvp igrlvkrlnl lpyyheapmv eplwqpefvs iplqqhigap svpvvsvgdh
      421 veagdciaka apdalsvaqh asitgtitev gtkvitmrrg
//
LOCUS       WP_258004352             410 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase N-terminal domain-containing protein
            [Cylindrospermopsis raciborskii].
ACCESSION   WP_258004352
VERSION     WP_258004352.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025039.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13655.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         1..410
                     /product="reverse transcriptase N-terminal
                     domain-containing protein"
                     /calculated_mol_wt=48089
     Region          12..>69
                     /region_name="RVT_N"
                     /note="N-terminal domain of reverse transcriptase;
                     pfam13655"
                     /db_xref="CDD:433382"
     Region          <70..350
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            order(122..127,172..173,211,213..214,255..256)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238828"
     Site            order(122..127,172,213)
                     /site_type="other"
                     /note="putative NTP binding site [chemical binding]"
                     /db_xref="CDD:238828"
     Site            173
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238828"
ORIGIN      
        1 mtktrktpmv vwaqinwrkl eravyklqqr iyqassrgdv kvvrklqktl lnswsakmla
       61 irqvrteyqa qqlliklale peweakfesh sygfrpgkty mdpimaikea mrygskyvis
      121 anlaqhfeqi dyekllskin tfpklrrqir vgiksgiynl nswllnqeii hpgsllspll
      181 vnialhgmek ivreygktip gkkeeitlir hgsefallds efdviikaki liekflsdlg
      241 iqinleqtln gfnfldfnir qyeikthsqp qryqtfiqps qeaikthyge laqeidkfks
      301 cqsqldlikr lnpiitrwsn yyfpvnsakt fqkldhlmtl kliawvkarh nhkstkqwve
      361 kyfgskdqan wvfrafeesq pvyltyhhgf lnavkqcdty tktstpnwys
//
LOCUS       WP_258004353              87 aa            linear   BCT 02-MAR-2025
DEFINITION  YeeE/YedE thiosulfate transporter family protein
            [Cylindrospermopsis raciborskii].
ACCESSION   WP_258004353
VERSION     WP_258004353.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
REFERENCE   1  (residues 1 to 87)
  AUTHORS   Gristwood,T., McNeil,M.B., Clulow,J.S., Salmond,G.P. and
            Fineran,P.C.
  TITLE     PigS and PigP regulate prodigiosin biosynthesis in Serratia via
            differential control of divergent operons, which include predicted
            transporters of sulfur-containing molecules
  JOURNAL   J Bacteriol 193 (5), 1076-1085 (2011)
   PUBMED   21183667
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016064.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04143.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         1..87
                     /product="YeeE/YedE thiosulfate transporter family
                     protein"
                     /calculated_mol_wt=8810
ORIGIN      
        1 mflgwnpsss kfwdgdpals ssvladttsi mnlglilgal laaglagkli pqtatnpstl
       61 lskalgglip tsnlvtlnnf qlvspqt
//
LOCUS       WP_258004486             280 aa            linear   BCT 02-MAR-2025
DEFINITION  Uma2 family endonuclease, partial [Cylindrospermopsis raciborskii].
ACCESSION   WP_258004486
VERSION     WP_258004486.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
REFERENCE   1  (residues 1 to 280)
  AUTHORS   Nakamura,A., Sosa,A., Komori,H., Kita,A. and Miki,K.
  TITLE     Crystal structure of TTHA1657 (AT-rich DNA-binding protein; p25)
            from Thermus thermophilus HB8 at 2.16 A resolution
  JOURNAL   Proteins 66 (3), 755-759 (2007)
   PUBMED   17154156
REFERENCE   2  (residues 1 to 280)
  AUTHORS   Feder,M. and Bujnicki,J.M.
  TITLE     Identification of a new family of putative PD-(D/E)XK nucleases
            with unusual phylogenomic distribution and a new type of the active
            site
  JOURNAL   BMC Genomics 6, 21 (2005)
   PUBMED   15720711
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017496.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05685.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         <1..280
                     /product="Uma2 family endonuclease"
     Region          <1..112
                     /region_name="PDDEXK_nuclease-like"
                     /note="PDDEXK family nucleases; cl40440"
                     /db_xref="CDD:477358"
     Region          <138..>268
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
ORIGIN      
        1 vpsrlngqlr rsyvlwkekv ppfiviefas kngkeekdss pppegdeidp etgkpkkagk
       61 fwvyeqavkv pyyaifngfk gtlevyhler krykeikanr rghyaipemg ielgilydnq
      121 kpptpwlrww dnkgnllltg nelaeqaeai airerlakeq aetiasqerl akeqereake
      181 qaetiasqer lakeqereak eraeeiasqe rlakeraeti asqerlaker aetiasqerl
      241 akeraetias qermakeqer qqkeklaayl rslgidpeki
//
LOCUS       WP_258004495             174 aa            linear   BCT 02-MAR-2025
DEFINITION  UDP-N-acetylglucosamine 2-epimerase, partial [Cylindrospermopsis
            raciborskii].
ACCESSION   WP_258004495
VERSION     WP_258004495.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
REFERENCE   1  (residues 1 to 174)
  AUTHORS   Swartley,J.S., Liu,L.J., Miller,Y.K., Martin,L.E., Edupuganti,S.
            and Stephens,D.S.
  TITLE     Characterization of the gene cassette required for biosynthesis of
            the (alpha1-->6)-linked N-acetyl-D-mannosamine-1-phosphate capsule
            of serogroup A Neisseria meningitidis
  JOURNAL   J Bacteriol 180 (6), 1533-1539 (1998)
   PUBMED   9515923
REFERENCE   2  (residues 1 to 174)
  AUTHORS   Kiser,K.B. and Lee,J.C.
  TITLE     Staphylococcus aureus cap5O and cap5P genes functionally complement
            mutations affecting enterobacterial common-antigen biosynthesis in
            Escherichia coli
  JOURNAL   J Bacteriol 180 (2), 403-406 (1998)
   PUBMED   9440531
REFERENCE   3  (residues 1 to 174)
  AUTHORS   Stasche,R., Hinderlich,S., Weise,C., Effertz,K., Lucka,L.,
            Moormann,P. and Reutter,W.
  TITLE     A bifunctional enzyme catalyzes the first two steps in
            N-acetylneuraminic acid biosynthesis of rat liver. Molecular
            cloning and functional expression of UDP-N-acetyl-glucosamine
            2-epimerase/N-acetylmannosamine kinase
  JOURNAL   J Biol Chem 272 (39), 24319-24324 (1997)
   PUBMED   9305888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014411.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02350.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         <1..>174
                     /product="UDP-N-acetylglucosamine 2-epimerase"
     Region          <1..>174
                     /region_name="NeuC_NnaA"
                     /note="UDP-N-acetyl-D-glucosamine 2-epimerase,
                     UDP-hydrolysing; TIGR03568"
                     /db_xref="CDD:274654"
ORIGIN      
        1 lgdrfevlaa aqaamvsrip iahihggett egafdeqirh aitkfaqwhf vaaepyrqrv
       61 iqlgespqrv fnlgapgldh lgrldwcdrp tleqflgikl lspiflvtyh pvtldeqsps
      121 iamgelltal dafpqatvil typnadtggr vlieqidqwv nsnqhrakaf vslg
//
LOCUS       WP_258004499             119 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Cylindrospermopsis
            raciborskii].
ACCESSION   WP_258004499
VERSION     WP_258004499.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
REFERENCE   1  (residues 1 to 119)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 119)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 119)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 119)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         1..119
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=12924
     Region          <1..94
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
ORIGIN      
        1 mervqeaarl aqiadfiegr eggyeeivge rgirlsggqr qrigiaraly kgasvivlde
       61 stsaldnste kevmaaiegl shqltvilia hrlseyagkm rshfsvvsgt glsrrrspw
//
LOCUS       WP_258004506             343 aa            linear   BCT 02-MAR-2025
DEFINITION  iron-containing alcohol dehydrogenase [Cylindrospermopsis
            raciborskii].
ACCESSION   WP_258004506
VERSION     WP_258004506.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012678.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00465.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         1..343
                     /product="iron-containing alcohol dehydrogenase"
                     /EC_number="1.1.1.1"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=37679
     Region          <3..337
                     /region_name="PRK13805"
                     /note="bifunctional acetaldehyde-CoA/alcohol
                     dehydrogenase; Provisional"
                     /db_xref="CDD:237515"
ORIGIN      
        1 mhkglaqtng fqpdviiavg ggspmdaakv iwlmyehpet efdglamrfm dirkrvyelp
       61 slgqkaifva ipttsgtgse vtpfavvtdd rtgikyplad yaltpsmaiv dpelvlnmpk
      121 sltayggida lthalesyvs icaseytkgl aleairllfk ylpsaykngg kdtkarekvh
      181 yaatiagmaf anaflgichs lahqlgarfh vphglanalm ishvirynat dapfkqaifp
      241 qyeypnakwr yakiadhlhl ggatedekvd lliaaveklk qdveipatik dviktdektf
      301 yekletmaeq afddqctgan pryplisdlq dlyikaywgn lgq
//
LOCUS       WP_258004518             133 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Cylindrospermopsis
            raciborskii].
ACCESSION   WP_258004518
VERSION     WP_258004518.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024908.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13518.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         1..133
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=15575
     Region          1..>110
                     /region_name="Csa3"
                     /note="CRISPR-associated protein Csa3, CARF domain
                     [Defense mechanisms]; COG3415"
                     /db_xref="CDD:442641"
ORIGIN      
        1 msnympkpys idlrnrviva wvaqegsqrq laerfkvsls fvrnlvrryr etgqvepkqc
       61 ggyekpiiag qylnmikswl dekndlllse lcdrlrettd aermrlsyet qqtngiyina
      121 ialhylvtfi iyy
//
LOCUS       WP_258004519            3220 aa            linear   BCT 02-MAR-2025
DEFINITION  Calx-beta domain-containing protein [Cylindrospermopsis
            raciborskii].
ACCESSION   WP_258004519
VERSION     WP_258004519.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
REFERENCE   1  (residues 1 to 3220)
  AUTHORS   Schwarz,E. and Benzer,S.
  TITLE     The recently reported NIbeta domain is already known as the
            Calx-beta motif
  JOURNAL   Trends Biochem Sci 24 (7), 260 (1999)
   PUBMED   10390612
REFERENCE   2  (residues 1 to 3220)
  AUTHORS   Schwarz,E.M. and Benzer,S.
  TITLE     Calx, a Na-Ca exchanger gene of Drosophila melanogaster
  JOURNAL   Proc Natl Acad Sci U S A 94 (19), 10249-10254 (1997)
   PUBMED   9294196
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015140.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03160.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3220
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         1..3220
                     /product="Calx-beta domain-containing protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007154 - cell communication [Evidence
                     IEA]"
                     /calculated_mol_wt=342016
     Region          314..1992
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          351..630
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     Region          <1983..>2067
                     /region_name="Peptidase_M10_C"
                     /note="Peptidase M10 serralysin C terminal; cl23859"
                     /db_xref="CDD:451582"
     Region          2156..2384
                     /region_name="PBP2_BztA"
                     /note="Substrate bindng domain of ABC
                     glutamate/glutamine/aspartate/asparagine transporter; the
                     type 2 periplasmic binding protein fold; cd13692"
                     /db_xref="CDD:270410"
     Site            order(2170,2174,2298,2301)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:270410"
     Site            order(2208,2223,2230,2274..2275,2316..2317,2348)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270410"
     Region          2485..2724
                     /region_name="PBP2_BztA"
                     /note="Substrate bindng domain of ABC
                     glutamate/glutamine/aspartate/asparagine transporter; the
                     type 2 periplasmic binding protein fold; cd13692"
                     /db_xref="CDD:270410"
     Site            order(2499,2506,2550,2565,2572,2616..2617,2658..2659,2688)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270410"
     Site            order(2512,2516,2640,2643)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:270410"
     Region          2821..2911
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(2825..2826,2877,2879,2908,2910..2911)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          2899..2991
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
     Region          3125..3218
                     /region_name="DUF4114"
                     /note="Domain of unknown function (DUF4114); pfam13448"
                     /db_xref="CDD:433216"
ORIGIN      
        1 mdakmisnia fniitdslqt fslsdkfwrs idssfgtsyn rtiaellrgk wekgdfsdlp
       61 piqivdsavl sggkgaysrk entiylssnl vcnveainkv iieeighyvd aqinqvdspg
      121 degaifaalv qgnvlsanvl aelrneddkg wlevngqkle veynhttvsl sltspttvte
      181 dgsqnlfyvf srtgditnsl tvnfdlplwn ydyesdmsir natinddyvq rgatsfdttt
      241 gsvtfaagss mvilsldpss dvvsdgnktv elvvgyrsds vtgtildndv vpgtvvkgni
      301 akseyfrtrh eyrnsgafaa lksdgsvvtw gfsdwggnss svsgtltsgv tqifsndsaf
      361 aalksdgsvv twgfsdwggn sssvrgtlts gvtqifstky afaalksdgs vvtwglreyg
      421 gdsssvssrl tsgvtqifsn elafaalksd gsvvtwgdsr yggnsssvss rltsdvtqif
      481 stssafaalk sdgsvvtwgd ssyggdssiv ssrlmwtsgv tqifsneraf aalksdgsvv
      541 twgdssyggd ssivrvrsgv tqifstssaf aalksdgsvv twgdsryggn sssvssklts
      601 gvtqifsner afaalksdgs vvtwgdssyg gnsssvssrl tsgvtqifst ssafaalksd
      661 gsvvtwnsss vssvssrlts gvtqifstss afaalksdgs vvtwggyggd sssvssqlts
      721 gvvsfadpfn ddrlvpssts fiylavspts vikdgtsnli ytfsrtgstt dtllvnytig
      781 gtatngsdyd tigtsvtfva gsstatvivn ptadttpedh ettvsltlas gtgynigttt
      841 avtgiildkd tivtlavspa svtedgttnl iytftrngft snartvnyti ggtaingndy
      901 sgigssvtfa agsstatviv nptadttped hetvsltlas gtgynigtsg avtgtitndd
      961 lptinliylp tddgfffsrd trvaedgtsn lfytftrtgp ttntltvnyt iggtatngid
     1021 ygtigesvtf aagsstatvi vnptadttpe dhetvsltla sgtgynigtt tdyhvttatr
     1081 tildddtivt lavspasvte dgttnliytf trngftsnar tvnytiggta ingndynysg
     1141 igpsvtfaag sstatvivnp tadttpekde tvsltlatld sgtggtrgtt tavigtildd
     1201 dtivtltvsp tsvtedgtsn liytftrngs ttntllvnyt iskdtiivkd glkfttvpat
     1261 ngidygtige svtfaagsst atvtvdptad ttpedhetvs ltlasgtgyn igtttavigt
     1321 ildddtivtl avsptsvted gtsnliytft rtgfiwnygs nsltvnytie gtatngsdyt
     1381 nigtsvtfva gsstatvtvd ptsdttvend etviltlasg tgytigtssg vtgtitnsgf
     1441 sstgvisqsy iagatiffdt nfnykwdege vktisdeyga fvlelpdsid tnrnriidit
     1501 egqliardgf dtssgllfga ltalpnstil tpltsvqakl vqdgltveea nnlltqqlgl
     1561 dstlvlenfd pleavgqqkq vgldtylihi qvqalslldg fqivtksknl lntiygfaqf
     1621 lkhrslktti pfdftseaei rafldfllqa qnlkttaekl daiaqivaag nqlllevskv
     1681 ggskstteal palasvkrvv qgssieliqq likgqkspqq sliaaqefln qnftfvdsdl
     1741 nafgnrtiqi kalarridet ngqsefeiql sqqapnqglk ilyslsgtat lgadyqidsk
     1801 tmgelyiapg etsakisist iddqiaepve titinlksvg egylidptsp valiriqdne
     1861 taiidqvikg itlegtigdd sfiaadgndk legsygndff dakggddivn ggygddillg
     1921 gegddwitgg hgndnlegna gndqidggsg ndylqggega dilnggmgnd tiegnggndq
     1981 idggdgndil lgnedndwlt gqvgndilig gtgddilngg egadvfyfss ksegfdtild
     2041 fnpeqgdkiq vsksgfavnn ldgfrfisgv ldfqgqnlal iqndgrtysy fpnlsdiiql
     2101 vetptvtvst eakaietqli vsanlteqta ltkfatipvn sgeptvttsa npdnllaeiq
     2161 qrgyirfsgg rsdsisgvfd yqfvraiaaa ifgdanrvdq vpgtfsesfs qvankqvdls
     2221 trhitqnlvr dgelnvdfgp vyyydflsvl vrnksgiqga kdlngkkigv vknttaltnl
     2281 dnlldsigvq ftaevfdtqn dlyaaynlge vdaiasdkgi iydalereil enkqehrfld
     2341 iqfskepigl vipenesewg dvvrwvvytt iqaeeygins qnidrlladn tddnskndsd
     2401 pairrflgle glegslgsal elpqdfvvqv ikqvgnygei yqrsfpsltr dlnllsltgg
     2461 lleslpfsgr sfdqelvnnd qrnllaeiqn rgfikyglpq itgsgfpgfa eidsqgqykg
     2521 fdvdlskaia aavfgdpskv eytqqafans fantanglvd vsaagytgnl mrdaglgvdy
     2581 spvyihtgqg iltrkdsgit giatlngsti galttvtaie nlsdltkkfg stiiitpfdd
     2641 knkmyaayek geidavyndk tllagiiptl sdpqaheilp etfskepltl ildenqsdwa
     2701 dvvrwvmnsl vqaeeygits tniddiiakn rdndpnnnsi keiqaflglq gnpgaslgls
     2761 sdfvvkmika vgnygeiyar nfdtnilpre kndlyhfsgl qyalplgsln qppsftgpdi
     2821 fsidentrlv giistkdpeq daitfalggv dyslfainps tgeltfntap nfeirldqdk
     2881 nhlyqlqvia ndtknnqvsq nisirvtdvn espiaeddrl tltevttqmi dplqndrdpd
     2941 lndqlkiisk tdgqygrvdi rdnqlvytll dayqsyagnd iftytisdak glnatgsvnv
     3001 mvkektlkpn svvsnpfiti nsssplipte agtqsgivdq isfrvpvnyn paqikevlqn
     3061 nvsqtsaafn nifglyeidd stgrvnnilp gqlgyteaal skvvtnfavr aggsgntvng
     3121 dvivnggkty apfvianggn ysgsiqqain effqvnpnns aataqnytsf pvayfsfgva
     3181 npdgaahikn fgnnvfgfed lpagvgvsdy dfndmlfsfg
//
LOCUS       WP_258004563             102 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Cylindrospermopsis raciborskii].
ACCESSION   WP_258004563
VERSION     WP_258004563.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
REFERENCE   1  (residues 1 to 102)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 102)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 102)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 102)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         <1..>102
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <1..91
                     /region_name="SunT"
                     /note="ABC-type bacteriocin/lantibiotic exporters, contain
                     an N-terminal double-glycine peptidase domain [Defense
                     mechanisms]; COG2274"
                     /db_xref="CDD:441875"
ORIGIN      
        1 ivgergirls ggqrqrigia ralykrasvi vldeatsald nttekeviaa ieglshqltv
       61 iliahrlstl ekcdrifqld qgqvyqegdr dgdsptnsat gg
//
LOCUS       WP_258004614             273 aa            linear   BCT 02-MAR-2025
DEFINITION  Uma2 family endonuclease, partial [Cylindrospermopsis raciborskii].
ACCESSION   WP_258004614
VERSION     WP_258004614.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
REFERENCE   1  (residues 1 to 273)
  AUTHORS   Nakamura,A., Sosa,A., Komori,H., Kita,A. and Miki,K.
  TITLE     Crystal structure of TTHA1657 (AT-rich DNA-binding protein; p25)
            from Thermus thermophilus HB8 at 2.16 A resolution
  JOURNAL   Proteins 66 (3), 755-759 (2007)
   PUBMED   17154156
REFERENCE   2  (residues 1 to 273)
  AUTHORS   Feder,M. and Bujnicki,J.M.
  TITLE     Identification of a new family of putative PD-(D/E)XK nucleases
            with unusual phylogenomic distribution and a new type of the active
            site
  JOURNAL   BMC Genomics 6, 21 (2005)
   PUBMED   15720711
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017496.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05685.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         <1..273
                     /product="Uma2 family endonuclease"
     Region          <13..105
                     /region_name="PDDEXK_nuclease-like"
                     /note="PDDEXK family nucleases; cl40440"
                     /db_xref="CDD:477358"
     Region          <131..>261
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
ORIGIN      
        1 qlrrsyvlwk ekvppfivie faskngkeek dsspppegde idpetgkpkk agkfwvyeqa
       61 vkvpyyaifn gfkgtlevyh lerkrykeik anrrghyaip emgielgily dnqkpptpwl
      121 rwwdnkgnll ltgnelaeqa eaiairerla keqaetiasq erlakeqere akeqaetias
      181 qerlakeqer eakeraeeia sqerlakera etiasqerla keraetiasq erlakeraet
      241 iasqermake qerqqkekla aylrslgidp eki
//
LOCUS       WP_258004648            1381 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerophosphodiester phosphodiesterase family protein
            [Cylindrospermopsis raciborskii].
ACCESSION   WP_258004648
VERSION     WP_258004648.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
REFERENCE   1  (residues 1 to 1381)
  AUTHORS   Kim,H. and Farrand,S.K.
  TITLE     Characterization of the acc operon from the nopaline-type Ti
            plasmid pTiC58, which encodes utilization of agrocinopines A and B
            and susceptibility to agrocin 84
  JOURNAL   J Bacteriol 179 (23), 7559-7572 (1997)
   PUBMED   9393724
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03009.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1381
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         1..1381
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /GO_function="GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=149976
     Region          10..>178
                     /region_name="COG4222"
                     /note="Uncharacterized conserved protein, contains a
                     phytase-like domain [Function unknown]; cl46779"
                     /db_xref="CDD:481119"
     Region          186..533
                     /region_name="GDPD_ScGlpQ1_like"
                     /note="Glycerophosphodiester phosphodiesterase domain of
                     Streptomycin coelicolor (GlpQ1) and similar proteins;
                     cd08602"
                     /db_xref="CDD:176544"
     Site            order(191,218,220,233,324,360,496)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176544"
     Site            order(191,233)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176544"
     Site            order(218,220,324)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:176544"
     Region          570..928
                     /region_name="PI-PLCc_GDPD_SF"
                     /note="Catalytic domain of phosphoinositide-specific
                     phospholipase C-like phosphodiesterases superfamily;
                     cl14615"
                     /db_xref="CDD:472694"
     Site            order(575,602,604,733,771,891)
                     /site_type="active"
                     /db_xref="CDD:176498"
     Site            order(575,617)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176498"
     Region          <973..1157
                     /region_name="COG4222"
                     /note="Uncharacterized conserved protein, contains a
                     phytase-like domain [Function unknown]"
                     /db_xref="CDD:443366"
     Region          <1242..1366
                     /region_name="Peptidase_M10_C"
                     /note="Peptidase M10 serralysin C terminal; cl23859"
                     /db_xref="CDD:451582"
ORIGIN      
        1 mpnmvtlkgf avlpadtfaa gpksgaavtn ptngrttpfs gqpvqgfsgv qfapntsgsr
       61 fwfladngfg aknnsadfll riyqldpnft gvengngkvg venfiqladp nrlipfsivn
      121 qntperlltg adfdvesfvi dyrgdiwigd efgtyllhfd sngvlldapi atpnpiqlnt
      181 lngqkpivig hrgasgelpe htieayrlai lrgadfiepd lvstkdgvli arhepnlint
      241 tdvnsrpefa srkkkvvvdg veeegffasd ftlaeiktlr avmpqgyrdq vfnglleipt
      301 lgeiidllke veaqtgkkig iypetkhpty hdnlglslee klidtlksks ftdptrifiq
      361 sfevsnlrdl nstimpargv niplvqltda ydvaddgtli ykdayarpyd ftvkgdtrty
      421 gdlltpagla eiakyadgiv pwkrqiisvk tvdknsdgkp ddlnndgvin dsdkvtlppt
      481 svvsdahklg llvhpytfrn esrflasdyn nnpeleyrqf inlgvdgyft dfpgtgdlvr
      541 dqittnqvrs pqnpnvlskp dfdtlngqkp ivighrgssg erpehtlasy tlaiaqgadf
      601 iepdlvvtkd nvliarhepm lavvnlntdg tiklvggkpe inltdtstdv hlrdkfqdrl
      661 kvknldgrnv ggwfaedftl aeikelnaie rlpslrstaf dqdglkvptl eevidlvkqv
      721 eletgrkigi ypetkhptff qqqgfntsql lvntlktlnf tdasrvfiqs fevsnlkelk
      781 ntimpgasvd iplvqlfggs grpydfvvng dsrtyndlst ptglkeiaqy akgigpnkqr
      841 ivpmstvdnn kdgqpddlng dgqisdadrt lgtpttliqd ahqagllvhl ytlrndgffl
      901 sadykgdpga evrkfvdlgv dgfftdfpkt gtsvivnnyl agtgyanpnn nlnspyfads
      961 pvyfnpnqpy ygdlvtanln rsqgfegmaf spdrqtvypm legtvvgdpa gsvriykfdv
     1021 atetytglvg ryqlaspsna igdftpindk eflvierdnn qgtgaafkki fkvdfsqvna
     1081 qgfvpkeeva nlldiqdpnd lnsdgnktyn mpfqtiedvv vwdnktiiva ndnnypfsig
     1141 rpplidnnei vvleldnpla ldarlglaat iaessqlvfg tpgvdnvsvp qgtdgindii
     1201 ftgagddkvd tlgvtnpyag nntvhsgsgk diidvnngdr ifggsgndei fatdakdyri
     1261 sggagndvfy lgtngralgg dgedkffvte gggnlisgga gadqfwittg dipsvdnkdv
     1321 antivdfqig tdvlgisgqg snfgfnnltl tnsdiiingn kvatltgint stltasnfaf
     1381 a
//
LOCUS       WP_258004755             292 aa            linear   BCT 02-MAR-2025
DEFINITION  GUN4 domain-containing protein, partial [Cylindrospermopsis
            raciborskii].
ACCESSION   WP_258004755
VERSION     WP_258004755.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
REFERENCE   1  (residues 1 to 292)
  AUTHORS   Larkin,R.M., Alonso,J.M., Ecker,J.R. and Chory,J.
  TITLE     GUN4, a regulator of chlorophyll synthesis and intracellular
            signaling
  JOURNAL   Science 299 (5608), 902-906 (2003)
   PUBMED   12574634
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017256.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05419.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         <1..292
                     /product="GUN4 domain-containing protein"
     Region          <1..257
                     /region_name="K-ycf53"
                     /note="Signaling protein combining a Ser/Thr protein
                     kinase domain and the GUN4/Ycf53 porphyrin-binding domain
                     [Signal transduction mechanisms]; COG5752"
                     /db_xref="CDD:444462"
     Region          134..271
                     /region_name="GUN4"
                     /note="porphyrin-binding protein domain GUN4; cd16383"
                     /db_xref="CDD:319862"
     Site            order(158,233,239,242,245,258,260..264)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:319862"
ORIGIN      
        1 yapieqyqrr anfgphtdvy algatlyyvl tanglrlkge sspvpavnrk ydeeelpepk
       61 synpsiskkv ndaimaamai npeqrtknie efrkdlglie skslakkevl tvkqsepqkk
      121 epikaeksve sevipsrytk letllkaqnf readeetrsv mlavanrqse gylrledaen
      181 fpckelrtid nlwlkysqgk fgisvqqeiy knlggtkfyd sdrwesfgdr vgwrkqgswl
      241 ywsdlnfsls aptghlpvyl vffdwrglir ftvlpywcvf gyvfppvktc rv
//
LOCUS       WP_258004001             229 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA polymerase III subunit gamma/tau C-terminal domain-containing
            protein, partial [Burkholderia pseudomallei].
ACCESSION   WP_258004001
VERSION     WP_258004001.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Dick,G.J., Podell,S., Johnson,H.A., Rivera-Espinoza,Y.,
            Bernier-Latmani,R., McCarthy,J.K., Torpey,J.W., Clement,B.G.,
            Gaasterland,T. and Tebo,B.M.
  TITLE     Genomic insights into Mn(II) oxidation by the marine
            alphaproteobacterium Aurantimonas sp. strain SI85-9A1
  JOURNAL   Appl Environ Microbiol 74 (9), 2646-2658 (2008)
   PUBMED   18344346
REFERENCE   2  (residues 1 to 229)
  AUTHORS   Jergic,S., Ozawa,K., Williams,N.K., Su,X.C., Scott,D.D.,
            Hamdan,S.M., Crowther,J.A., Otting,G. and Dixon,N.E.
  TITLE     The unstructured C-terminus of the tau subunit of Escherichia coli
            DNA polymerase III holoenzyme is the site of interaction with the
            alpha subunit
  JOURNAL   Nucleic Acids Res 35 (9), 2813-2824 (2007)
   PUBMED   17355988
REFERENCE   3  (residues 1 to 229)
  AUTHORS   Gao,D. and McHenry,C.S.
  TITLE     tau binds and organizes Escherichia coli replication through
            distinct domains. Partial proteolysis of terminally tagged tau to
            determine candidate domains and to assign domain V as the alpha
            binding domain
  JOURNAL   J Biol Chem 276 (6), 4433-4440 (2001)
   PUBMED   11078743
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12170.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..229
                     /product="DNA polymerase III subunit gamma/tau C-terminal
                     domain-containing protein"
                     /GO_function="GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA]"
     Region          <1..229
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
ORIGIN      
        1 raraatgdap pngavraear aesrgapppw edippddyvp lsmddgfipp ddgfvpvfds
       61 epddvrvapk papappvdtr plpepiplda igydgewptl aaslplkgva yqlafnselt
      121 aadggtlkla vpvpqyadaa qvaklkaala dalgkpvdva vevgparrta aalaaaerak
      181 rrreaeqems adpfvqqllr efgasivegs irpvgaeaga adgasptlh
//
LOCUS       WP_258004560             487 aa            linear   BCT 02-MAR-2025
DEFINITION  GUN4 domain-containing protein, partial [Cylindrospermopsis
            raciborskii].
ACCESSION   WP_258004560
VERSION     WP_258004560.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
REFERENCE   1  (residues 1 to 487)
  AUTHORS   Larkin,R.M., Alonso,J.M., Ecker,J.R. and Chory,J.
  TITLE     GUN4, a regulator of chlorophyll synthesis and intracellular
            signaling
  JOURNAL   Science 299 (5608), 902-906 (2003)
   PUBMED   12574634
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017256.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05419.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         1..>487
                     /product="GUN4 domain-containing protein"
     Region          4..238
                     /region_name="COG4249"
                     /note="Uncharacterized conserved protein, contains caspase
                     domain [General function prediction only]"
                     /db_xref="CDD:443391"
     Region          326..461
                     /region_name="GUN4"
                     /note="porphyrin-binding protein domain GUN4; cd16383"
                     /db_xref="CDD:319862"
     Site            order(350,425,431,434,439,452..457)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:319862"
ORIGIN      
        1 myksmgqnwa isiginhydn lqplkyakrd aeamkewfrt sgfnqvflft edspgiptsp
       61 psppivtrpt ygtlrrflnv hferpllqsg dnlwfffagh grrhqdkdyl mlndtdphdi
      121 ehtaisveya tqrlrrcgad nvillldacr negrrdglgf gdkkyqgvit fyscsanqqa
      181 weidalqhgt fthtlleglk iegegncatv erlyrhltse ipnlntrygk qpqnpylsad
      241 ppykmnyill prfanerdid plvmeaqnae lgkdldlaek lwerilaang tnqmaldgir
      301 riarattvpg tsdgiqsetk tqslhtpnry tkletllnak nfreadsetd svmlavanrq
      361 segylrveda enfpcqelrt idnlwlkysq gkfgisvqqe iyknlggtkq fdseiwesfg
      421 drvgwrkqgs wlsetgkdln fslsaptgql psmwgwkgin wdvkvevggg mrvpnvgliv
      481 ggynrir
//
LOCUS       WP_258004854             648 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein
            [Salinibacter ruber].
ACCESSION   WP_258004854
VERSION     WP_258004854.1
KEYWORDS    RefSeq.
SOURCE      Salinibacter ruber
  ORGANISM  Salinibacter ruber
            Bacteria; Pseudomonadati; Rhodothermota; Rhodothermia;
            Rhodothermales; Salinibacteraceae; Salinibacter.
REFERENCE   1  (residues 1 to 648)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Salinibacter ruber"
                     /db_xref="taxon:146919"
     Protein         1..648
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /calculated_mol_wt=69699
     Region          2..555
                     /region_name="FtsI"
                     /note="Cell division protein FtsI, peptidoglycan
                     transpeptidase (Penicillin-binding protein 2) [Cell cycle
                     control, cell division, chromosome partitioning, Cell
                     wall/membrane/envelope biogenesis]; COG0768"
                     /db_xref="CDD:440531"
     Region          596..639
                     /region_name="PASTA"
                     /note="PASTA domain. This domain is found at the C-termini
                     of several Penicillin-binding proteins (PBPs) and
                     bacterial serine/threonine kinases. It is a small globular
                     fold consisting of 3 beta-sheets and an alpha-helix. The
                     name PASTA is derived from PBP and...; cl02768"
                     /db_xref="CDD:470670"
ORIGIN      
        1 mkpkdqilar myvaltllgl aplavaaqmg qivvtetdal rdqvraqars lvtipamrga
       61 irdrdgrgla tntarydlav dptvegfrgq agtffdklad ltdasasryr rrvrdrhspq
      121 yvklreeltp rqyeairgwd vpgviltpef grhynygsta ahvighvgsn gtglaglela
      181 yddtltgtpg rrivrrdrsg rieayvggtv vqpergddlv ltidltrqaa lenelrrgvr
      241 esgaewgtav amdpstgail gmanvptynp nrpgrapsga rrnraltdrf epgstfklvg
      301 avaaieqglv slddsvetgd gwavfhgytm kdvqahgtis fadviakssn vgmaktvdel
      361 drgtyyqyar nmgfsqptwi dlpgevggvl krppqwsatt qtsmaigyev sitplqlita
      421 ysalanggll krpyvvaerr dvtgktlwen epetirrafr eetadtlrsa fervvetgtg
      481 tnaqieglrv agktgtalql adgeysadet rasfvgffpa napevallvv lgapdggphg
      541 gevaapvfrr varrwagtfp avvdrmtpdp spaptaalvg arpsadtlps grpdampdlt
      601 glstrravaw lrgrdiepql rgagkvvrqr prpgaplpet ralltaaq
//
LOCUS       WP_258004813              66 aa            linear   BCT 02-MAR-2025
DEFINITION  GUN4 domain-containing protein [Cylindrospermopsis raciborskii].
ACCESSION   WP_258004813
VERSION     WP_258004813.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
REFERENCE   1  (residues 1 to 66)
  AUTHORS   Larkin,R.M., Alonso,J.M., Ecker,J.R. and Chory,J.
  TITLE     GUN4, a regulator of chlorophyll synthesis and intracellular
            signaling
  JOURNAL   Science 299 (5608), 902-906 (2003)
   PUBMED   12574634
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017256.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05419.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         1..66
                     /product="GUN4 domain-containing protein"
                     /calculated_mol_wt=7651
     Region          <11..50
                     /region_name="Ycf53"
                     /note="Chlorophyll biosynthesis regulator GUN4/Ycf53
                     domain [Signal transduction mechanisms]; COG5750"
                     /db_xref="CDD:444460"
ORIGIN      
        1 mgllrrrrdr vgwrkqdswl nyndlnfsls aetghlpvrv varrvgcvmr wvirregapl
       61 pscqdm
//
LOCUS       WP_258004903             767 aa            linear   BCT 02-MAR-2025
DEFINITION  amino acid permease [Salinibacter ruber].
ACCESSION   WP_258004903
VERSION     WP_258004903.1
KEYWORDS    RefSeq.
SOURCE      Salinibacter ruber
  ORGANISM  Salinibacter ruber
            Bacteria; Pseudomonadati; Rhodothermota; Rhodothermia;
            Rhodothermales; Salinibacteraceae; Salinibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Salinibacter ruber"
                     /db_xref="taxon:146919"
     Protein         1..767
                     /product="amino acid permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=82233
     Region          22..>599
                     /region_name="AA_permease_2"
                     /note="Amino acid permease; cl45918"
                     /db_xref="CDD:459263"
ORIGIN      
        1 mtapqpdnga etppapsnpd aqaapddtae mdarmtpeea pisgrkkfgt fggvftptvl
       61 tilgvimylr egwiignagl lgglliitlg faitlctala mssittniri gaggayavia
      121 qslglevggs vgiprylsqa favtmyifgf regwlfvfps hpallvdiat fatlygiayv
      181 sadfairvqy limaligasl vsiaaaaatg smqyglgevq lwgdftgtpa dptrpnsfwi
      241 vfavffpatt gimaganmsg dlkdpkrsip vgtlaavgvs fviyvvlavw lalsatpeem
      301 vssytvmvdk aywppavlag llgatfssal aslvgagril qamgahrvvp kadwlahlap
      361 dgeprhsmmv tgaiifaslm vrdlnaiapl itmfflvtya micaavlieq glglvsfrpr
      421 lripiwvsfl glagsllamf iinptisvva lvvtlgfyvi larrqldapf edvrsgmfva
      481 laewaakkvt elptmqeraw kpnllvpveq ssalrgsflt lqdltapqgs vkivglspng
      541 rpdvltdqld tltaafrerd iftsatvida ggfaeglrag mqalrgaffh pnivflrmpt
      601 spereadyrh viaeadrenv gtllyaphpr aalgqrqtin vwirdrspdw rismeignld
      661 lalltgykls qnwdaqmrlv tavadpdqqg taqdflekli dlgrfpdsta vvgtdpfday
      721 ikaapqadln ifglqpepdf dtirrlvdqt dstcmfvrds gresala
//
LOCUS       WP_258004715             246 aa            linear   BCT 02-MAR-2025
DEFINITION  GUN4 domain-containing protein, partial [Cylindrospermopsis
            raciborskii].
ACCESSION   WP_258004715
VERSION     WP_258004715.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
REFERENCE   1  (residues 1 to 246)
  AUTHORS   Larkin,R.M., Alonso,J.M., Ecker,J.R. and Chory,J.
  TITLE     GUN4, a regulator of chlorophyll synthesis and intracellular
            signaling
  JOURNAL   Science 299 (5608), 902-906 (2003)
   PUBMED   12574634
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017256.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05419.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         <1..246
                     /product="GUN4 domain-containing protein"
     Region          <3..37
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cl21584"
                     /db_xref="CDD:473915"
     Region          <21..>59
                     /region_name="DegQ"
                     /note="Periplasmic serine protease, S1-C subfamily,
                     contain C-terminal PDZ domain [Posttranslational
                     modification, protein turnover, chaperones]; COG0265"
                     /db_xref="CDD:440035"
     Region          68..195
                     /region_name="GUN4"
                     /note="porphyrin-binding protein domain GUN4; cd16383"
                     /db_xref="CDD:319862"
ORIGIN      
        1 ilkkprdggy slvyrigalk gmsggpilde ngklvgihgl tysqslgdgr gtpeeygipl
       61 qtflnapppt psrytkletl lksqdfread ietarvmlav anrqsvgwlr eedaenfpck
      121 dlrtidnlwl kysqgkfgis vqqeiyknlg gtkqvdenvw rsfgdrvgwr kqgswlvqfs
      181 dlnfslsapt gqlpfvmasf frlsapvfcm vgggtmcser pkeglnsrww idsflplfpp
      241 vktcrv
//
LOCUS       WP_258004955            1362 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Salinibacter ruber].
ACCESSION   WP_258004955
VERSION     WP_258004955.1
KEYWORDS    RefSeq.
SOURCE      Salinibacter ruber
  ORGANISM  Salinibacter ruber
            Bacteria; Pseudomonadati; Rhodothermota; Rhodothermia;
            Rhodothermales; Salinibacteraceae; Salinibacter.
REFERENCE   1  (residues 1 to 1362)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 1362)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 1362)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 1362)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1362
                     /organism="Salinibacter ruber"
                     /db_xref="taxon:146919"
     Protein         1..1362
                     /product="ATP-binding protein"
                     /calculated_mol_wt=148546
     Region          <351..952
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          878..>1197
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
     Region          1066..1362
                     /region_name="NtrY"
                     /note="Signal transduction histidine kinase NtrY involved
                     in nitrogen fixation and metabolism regulation [Signal
                     transduction mechanisms]; COG5000"
                     /db_xref="CDD:444024"
ORIGIN      
        1 mlrrrpwawg vglgicvgll vtaglrtyav qsvaanvtar qeatveaala tiqerfeglr
       61 drlhdraegl aadstiwqdl rawreqgtrp arlaqyvaar psdarmaiev yapngrvlaw
      121 agpqvpvdsa qagkgeaarp rtavvrdgrg rwalaawapv trggtrlgav rvvrvvryrp
      181 pvqnryvqat sleaqwsrat gelvrvrwsg appatphral rgrngavlgy asveppppdr
      241 lvdrtaafyt dllaagavgl lgwvlalggh wylrlarrpg lrrhwrarra aagrlalval
      301 lavgaryaml aldvparwag pgsgiaplfn ptyfastlgg glfrsigdll ltgvwaagla
      361 tgvvylarhy rpraealsgl peafrryapd rphaarylgt llglvagslg aivvlafivr
      421 ravfdstldf fartgllpep lvlgvlcglf llvaagilvg iggtwgalrr llhhrprswp
      481 rgiglvlgtg lyggalaaly lgtdvqafvs lpyvlallag vgglatyglv gpahgdealt
      541 lrgllgglfa vtlllyplly agmdakrqeh mvdaarsfer gqdprvlysv rrvlrsaaea
      601 lgpsvraadp asearldsia pqvvreslls slatyevrls vlewdgtvrr qytadgpvaa
      661 geqtedaarr afaglwsryg qrpgpvveql stgapvrtae trrvqyagll gvptggefve
      721 gwvlvriepq svlpgtgfgl srvllpdgsf gdlyadlsla efrdgrlvrs vgeafgrarl
      781 rppkrdalrg kpgvwrnetv qgreylthyr rfvpvgettp stvavripat lafdhlyyll
      841 rltvaglcvg lvvyllglyv rhrrgrlpas rvrfrnkvln aflvvgivsm vavgvvgvrv
      901 vtgeneraie rrmhdqltrv eetlalaarp geplwrtaer mdvdtlaarv gldlhlydeg
      961 rlartsqprl rrdglvderl pggvyhelyd eayrfvtaeg sigqfryrvg yralvdetgr
     1021 prvvvgvptl aqqeqlqeek srtlaylfga llllvvvvml tgvvlanala rpiaqlregl
     1081 eavgegrftr tlsvdtrdev gdlvqtfnem rdqlaesrrk larqerelaw remarqvahe
     1141 iknpltpmkl siqhlrraft rtddatdaae fakvfdrits tlveqveslv riadefstfa
     1201 rlptrvpepi dlvevvrgaa slmeeeaana ealaldlpgd plvveadree lrrvyinllk
     1261 nalqalpddr egrvrvtarr eenagdglsv ysevidngtg ippevqdkvf epnfstktsg
     1321 tglglaiaqk sidelggaig yettegegtt fwirlplvde pa
//
LOCUS       WP_258004959             492 aa            linear   BCT 02-MAR-2025
DEFINITION  lamin tail domain-containing protein [Salinibacter ruber].
ACCESSION   WP_258004959
VERSION     WP_258004959.1
KEYWORDS    RefSeq.
SOURCE      Salinibacter ruber
  ORGANISM  Salinibacter ruber
            Bacteria; Pseudomonadati; Rhodothermota; Rhodothermia;
            Rhodothermales; Salinibacteraceae; Salinibacter.
REFERENCE   1  (residues 1 to 492)
  AUTHORS   Mans,B.J., Anantharaman,V., Aravind,L. and Koonin,E.V.
  TITLE     Comparative genomics, evolution and origins of the nuclear envelope
            and nuclear pore complex
  JOURNAL   Cell Cycle 3 (12), 1612-1637 (2004)
   PUBMED   15611647
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013125.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00932.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Salinibacter ruber"
                     /db_xref="taxon:146919"
     Protein         1..492
                     /product="lamin tail domain-containing protein"
                     /calculated_mol_wt=51698
     Region          26..139
                     /region_name="LTD"
                     /note="Lamin Tail Domain; pfam00932"
                     /db_xref="CDD:460003"
     Region          187..272
                     /region_name="Big_5"
                     /note="Bacterial Ig-like domain; pfam13205"
                     /db_xref="CDD:463809"
     Region          288..399
                     /region_name="LTD"
                     /note="Lamin Tail Domain; pfam00932"
                     /db_xref="CDD:460003"
ORIGIN      
        1 mrsllwgsil llglggglsp rpgtaqpepg avvineilya pspstnefie lynrsggpia
       61 ldelafadan rsyepvartd ttvrdgthvv lvrdpkafta afpsttfltp ddwpalnngg
      121 dtvylrhaps dtpldsvpyd pswgggngrs leridpggps dtdanfasse aasgatpgtq
      181 nsvyapdetp pslaravpsq ngdsitvvfs epvapasisp eafrldsada paivtaqidd
      241 grpaqvrfav gsplstgeyr lvatgvadrr gnvrdedsap lsyvvadtpa padvvvseim
      301 yapsvasnef ievynrsdkt ldlgtiqyad darnfapaap pltpfrpgqy avlvrdeeaf
      361 aetypsvefv aprgwdalnn ggdtvvlrha psgtpldavp fdpswggsdg rsleridprg
      421 psdeasnfas stapdgatpg aqnsrfapdt apprptfaeq vdsltaavvf nepirgesvr
      481 parfqfedva vt
//
LOCUS       WP_258004705             211 aa            linear   BCT 02-MAR-2025
DEFINITION  SinI family restriction endonuclease [Cylindrospermopsis
            raciborskii].
ACCESSION   WP_258004705
VERSION     WP_258004705.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
REFERENCE   1  (residues 1 to 211)
  AUTHORS   Steczkiewicz,K., Muszewska,A., Knizewski,L., Rychlewski,L. and
            Ginalski,K.
  TITLE     Sequence, structure and functional diversity of PD-(D/E)XK
            phosphodiesterase superfamily
  JOURNAL   Nucleic Acids Res 40 (15), 7016-7045 (2012)
   PUBMED   22638584
REFERENCE   2  (residues 1 to 211)
  AUTHORS   Jeltsch,A. and Pingoud,A.
  TITLE     Horizontal gene transfer contributes to the wide distribution and
            evolution of type II restriction-modification systems
  JOURNAL   J Mol Evol 42 (2), 91-96 (1996)
   PUBMED   8919860
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021111.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09570.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         1..211
                     /product="SinI family restriction endonuclease"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0009036 - type II site-specific
                     deoxyribonuclease activity [Evidence IEA]"
                     /GO_process="GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /calculated_mol_wt=23682
     Region          2..209
                     /region_name="RE_SinI"
                     /note="SinI restriction endonuclease; pfam09570"
                     /db_xref="CDD:312916"
ORIGIN      
        1 maireidpsl enqfanlirf lslfpsaasa lrrknapgig segyiyaaas nyakgrdpkr
       61 peppatipde mvsfvlqyyf dvnpnnldri nrehalsmsa enivghlleq ylstvlephg
      121 wvwcagslvk avdfvkpvgd dwlllqvknr dnsenssssa iregttikkw hrtfskkpgs
      181 nwatfpddqa rphlsengfr efvktylesl k
//
LOCUS       WP_258004972             229 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Salinibacter ruber].
ACCESSION   WP_258004972
VERSION     WP_258004972.1
KEYWORDS    RefSeq.
SOURCE      Salinibacter ruber
  ORGANISM  Salinibacter ruber
            Bacteria; Pseudomonadati; Rhodothermota; Rhodothermia;
            Rhodothermales; Salinibacteraceae; Salinibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019581.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07969.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Salinibacter ruber"
                     /db_xref="taxon:146919"
     Protein         1..229
                     /product="amidohydrolase family protein"
                     /calculated_mol_wt=25284
     Region          <2..202
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
ORIGIN      
        1 maaqeyrrkk eqaddpseap drnlrmegli dvlegrrtvh fhthrhddil tairlseefg
       61 fdlvlhhvse gwkvadeiae advpasiivl dspggkhead elvyrtgrvl eeagvdvayh
      121 tddpitdsrl flrspafgvr agmsrdaale svtlagarml gledevgsle egkdadfivl
      181 sgdplsvyte ieqtwvegtp vfdrsdpddr efatggyrvy dgaaqhvhe
//
LOCUS       WP_258004995             187 aa            linear   BCT 02-MAR-2025
DEFINITION  PKD domain-containing protein [Salinibacter ruber].
ACCESSION   WP_258004995
VERSION     WP_258004995.1
KEYWORDS    RefSeq.
SOURCE      Salinibacter ruber
  ORGANISM  Salinibacter ruber
            Bacteria; Pseudomonadati; Rhodothermota; Rhodothermia;
            Rhodothermales; Salinibacteraceae; Salinibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040138.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18911.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Salinibacter ruber"
                     /db_xref="taxon:146919"
     Protein         1..187
                     /product="PKD domain-containing protein"
                     /calculated_mol_wt=18819
     Region          109..174
                     /region_name="PKD"
                     /note="PKD domain; pfam00801"
                     /db_xref="CDD:395646"
ORIGIN      
        1 msdppsdpea paapgrgrpt lhiggatvpe etvvisvsgg tileyelsde aqdpaltdgs
       61 riearfpsyg tynvtayvdd gsgtgesvda ilskpvciap rphlnispsg tvptgapvtf
      121 dagasagdvt gyewtidgpe pargtgetls vsfsvpgdys ailkvegrng aaartqigft
      181 vaatvsa
//
LOCUS       WP_258005057             885 aa            linear   BCT 02-MAR-2025
DEFINITION  M14 family zinc carboxypeptidase [Salinibacter ruber].
ACCESSION   WP_258005057
VERSION     WP_258005057.1
KEYWORDS    RefSeq.
SOURCE      Salinibacter ruber
  ORGANISM  Salinibacter ruber
            Bacteria; Pseudomonadati; Rhodothermota; Rhodothermia;
            Rhodothermales; Salinibacteraceae; Salinibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012471.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00246.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Salinibacter ruber"
                     /db_xref="taxon:146919"
     Protein         1..885
                     /product="M14 family zinc carboxypeptidase"
                     /GO_function="GO:0004181 - metallocarboxypeptidase
                     activity [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=97790
     Region          64..>197
                     /region_name="Peptidase_M14_like"
                     /note="M14 family of metallocarboxypeptidases and related
                     proteins; cl11393"
                     /db_xref="CDD:472171"
     Region          137..354
                     /region_name="Peptidase_M14_like"
                     /note="M14 family of metallocarboxypeptidases and related
                     proteins; cl11393"
                     /db_xref="CDD:472171"
     Site            order(147,150,224,233..234,263..264,268,339)
                     /site_type="active"
                     /db_xref="CDD:349427"
ORIGIN      
        1 mpsplrrlpi vlavlfvagp agaqpadltp erfsfdpdla ydssipaped algyemgtqf
       61 tlhadavdyl rtladasdrv rmgtygetye drtlpylvvt saqnqgrldq lkrnsrrlsa
      121 paslsasard rllqnqpvfv sysynihgne pasteaalqv ayrlaaardd rtrallqdav
      181 vimyptvnpd grdryvywar smqraqvate padivhdepw pqgrtnhywf dlnrdwvwnv
      241 hpemegltgv yqefmpqvha dyheqgyndh yftmpgttpr npilpdryva wadtfgrani
      301 eafdqnqiay ftreafdffy psygssypsv mggismlteq agigagrave nndgytltfr
      361 qrvhdhyats latieasvqn rralleydln ahsqasntie taayvfpddr gtgylydvld
      421 mlrhhgveva rtteatrldn aldyrtgera drrveagayv vptdqprhlf vntllqrqva
      481 fqdsvmydms twsaplaynl eaystresvg aetevvetap tpdsgvtnpd aqyafvvewn
      541 qrhapralsa lweagyrvra ahesfdtgtq sfgagslvil lgrnpdhddp vadmrriase
      601 asveivgldt grmaegpdlg sadnapvkpp evgmlvdqpf stytsgqiwy lfdqetelpi
      661 trirtsnlee satgegryar ygkasldald vlilpggygl davfdstrvd alrawvrdgg
      721 tlvgteesar fltadesglt dvealpdttd spigpytsya arddssgldy vpgaaltgrl
      781 dathpltygi gdavytlkyg vsglepspdl qtaghyardt eellvsgyas qanlqqmagk
      841 sfagtvemgd grvvflvdnt qyrmfwrgps rmmqnavmlv pglvd
//
LOCUS       WP_258005052            2795 aa            linear   BCT 02-MAR-2025
DEFINITION  Calx-beta domain-containing protein [Cylindrospermopsis
            raciborskii].
ACCESSION   WP_258005052
VERSION     WP_258005052.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
REFERENCE   1  (residues 1 to 2795)
  AUTHORS   Schwarz,E. and Benzer,S.
  TITLE     The recently reported NIbeta domain is already known as the
            Calx-beta motif
  JOURNAL   Trends Biochem Sci 24 (7), 260 (1999)
   PUBMED   10390612
REFERENCE   2  (residues 1 to 2795)
  AUTHORS   Schwarz,E.M. and Benzer,S.
  TITLE     Calx, a Na-Ca exchanger gene of Drosophila melanogaster
  JOURNAL   Proc Natl Acad Sci U S A 94 (19), 10249-10254 (1997)
   PUBMED   9294196
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015140.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03160.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2795
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         1..2795
                     /product="Calx-beta domain-containing protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007154 - cell communication [Evidence
                     IEA]"
                     /calculated_mol_wt=296351
     Region          2..1567
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          21..281
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     Region          <1558..>1642
                     /region_name="Peptidase_M10_C"
                     /note="Peptidase M10 serralysin C terminal; cl23859"
                     /db_xref="CDD:451582"
     Region          1731..1959
                     /region_name="PBP2_BztA"
                     /note="Substrate bindng domain of ABC
                     glutamate/glutamine/aspartate/asparagine transporter; the
                     type 2 periplasmic binding protein fold; cd13692"
                     /db_xref="CDD:270410"
     Site            order(1745,1749,1873,1876)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:270410"
     Site            order(1783,1798,1805,1849..1850,1891..1892,1923)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270410"
     Region          2060..2299
                     /region_name="PBP2_BztA"
                     /note="Substrate bindng domain of ABC
                     glutamate/glutamine/aspartate/asparagine transporter; the
                     type 2 periplasmic binding protein fold; cd13692"
                     /db_xref="CDD:270410"
     Site            order(2074,2081,2125,2140,2147,2191..2192,2233..2234,2263)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270410"
     Site            order(2087,2091,2215,2218)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:270410"
     Region          2396..2486
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(2400..2401,2452,2454,2483,2485..2486)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          2474..2566
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
     Region          2700..2793
                     /region_name="DUF4114"
                     /note="Domain of unknown function (DUF4114); pfam13448"
                     /db_xref="CDD:433216"
ORIGIN      
        1 mssrltsgvt qifsnelafa alksdgsvvt wgdsryggns ssvssrltsd vtqifstssa
       61 faalksdgsv vtwgdssygg dssivssrlm wtsgvtqifs nerafaalks dgsvvtwgds
      121 syggdssivr vrsgvtqifs tssafaalks dgsvvtwgds ryggnsssvs skltsgvtqi
      181 fsnerafaal ksdgsvvtwg dssyggnsss vssrltsgvt qifstssafa alksdgsvvt
      241 wnsssvssvs srltsgvtqi fstssafaal ksdgsvvtwg gyggdsssvs sqltsgvvsf
      301 adpfnddrlv psstsfiyla vsptsvikdg tsnliytfsr tgsttdtllv nytiggtatn
      361 gsdydtigts vtfvagssta tvivnptadt tpedhettvs ltlasgtgyn igtttavtgi
      421 ildkdtivtl avspasvted gttnliytft rngftsnart vnytiggtai ngndysgigs
      481 svtfaagsst atvivnptad ttpedhetvs ltlasgtgyn igtsgavtgt itnddlptin
      541 liylptddgf ffsrdtrvae dgtsnlfytf trtgpttntl tvnytiggta tngidygtig
      601 esvtfaagss tatvivnpta dttpedhetv sltlasgtgy nigtttdyhv ttatrtildd
      661 dtivtlavsp asvtedgttn liytftrngf tsnartvnyt iggtaingnd ynysgigpsv
      721 tfaagsstat vivnptadtt pekdetvslt latldsgtgg trgtttavig tildddtivt
      781 ltvsptsvte dgtsnliytf trngsttntl lvnytiskdt iivkdglkft tvpatngidy
      841 gtigesvtfa agsstatvtv dptadttped hetvsltlas gtgynigttt avigtilddd
      901 tivtlavspt svtedgtsnl iytftrtgfi wnygsnsltv nytiegtatn gsdytnigts
      961 vtfvagssta tvtvdptsdt tvendetvil tlasgtgyti gtssgvtgti tnsgfsstgv
     1021 isqsyiagat iffdtnfnyk wdegevktis deygafvlel pdsidtnrnr iiditegqli
     1081 ardgfdtssg llfgaltalp nstiltplts vqaklvqdgl tveeannllt qqlgldstlv
     1141 lenfdpleav gqqkqvgldt ylihiqvqal slldgfqivt ksknllntiy gfaqflkhrs
     1201 lkttipfdft seaeirafld fllqaqnlkt taekldaiaq ivaagnqlll evskvggsks
     1261 ttealpalas vkrvvqgssi eliqqlikgq kspqqsliaa qeflnqnftf vdsdlnafgn
     1321 rtiqikalar ridetngqse feiqlsqqap nqglkilysl sgtatlgady qidsktmgel
     1381 yiapgetsak isistiddqi aepvetitin lksvgegyli dptspvalir iqdnetaiid
     1441 qvikgitleg tigddsfiaa dgndklegsy gndffdakgg ddivnggygd dillggegdd
     1501 witgghgndn legnagndqi dggsgndylq ggegadilng gmgndtiegn ggndqidggd
     1561 gndillgned ndwltgqvgn diliggtgdd ilnggegadv fyfssksegf dtildfnpeq
     1621 gdkiqvsksg favnnldgfr fisgvldfqg qnlaliqndg rtysyfpnls diiqlvetpt
     1681 vtvsteakai etqlivsanl teqtaltkfa tipvnsgept vttsanpdnl laeiqqrgyi
     1741 rfsggrsdsi sgvfdyqfvr aiaaaifgda nrvdqvpgtf sesfsqvank qvdlstrhit
     1801 qnlvrdgeln vdfgpvyyyd flsvlvrnks giqgakdlng kkigvvkntt altnldnlld
     1861 sigvqftaev fdtqndlyaa ynlgevdaia sdkgiiydal ereilenkqe hrfldiqfsk
     1921 epiglvipen esewgdvvrw vvyttiqaee yginsqnidr lladntddns kndsdpairr
     1981 flgleglegs lgsalelpqd fvvqvikqvg nygeiyqrsf psltrdlnll sltggllesl
     2041 pfsgrsfdqe lvnndqrnll aeiqnrgfik yglpqitgsg fpgfaeidsq gqykgfdvdl
     2101 skaiaaavfg dpskveytqq afansfanta nglvdvsaag ytgnlmrdag lgvdyspvyi
     2161 htgqgiltrk dsgitgiatl ngstigaltt vtaienlsdl tkkfgstiii tpfddknkmy
     2221 aayekgeida vyndktllag iiptlsdpqa heilpetfsk epltlilden qsdwadvvrw
     2281 vmnslvqaee ygitstnidd iiaknrdndp nnnsikeiqa flglqgnpga slglssdfvv
     2341 kmikavgnyg eiyarnfdtn ilprekndly hfsglqyalp lgslnqppsf tgpdifside
     2401 ntrlvgiist kdpeqdaitf alggvdyslf ainpstgelt fntapnfeir ldqdknhlyq
     2461 lqviandtkn nqvsqnisir vtdvnespia eddrltltev ttqmidplqn drdpdlndql
     2521 kiisktdgqy grvdirdnql vytlldayqs yagndiftyt isdakglnat gsvnvmvkek
     2581 tlkpnsvvsn pfitinsssp lipteagtqs givdqisfrv pvnynpaqik evlqnnvsqt
     2641 saafnnifgl yeiddstgrv nnilpgqlgy teaalskvvt nfavraggsg ntvngdvivn
     2701 ggktyapfvi anggnysgsi qqaineffqv npnnsaataq nytsfpvayf sfgvanpdga
     2761 ahiknfgnnv fgfedlpagv gvsdydfndm lfsfg
//
LOCUS       WP_258005075             217 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF4145 domain-containing protein
            [Cylindrospermopsis].
ACCESSION   WP_258005075
VERSION     WP_258005075.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis
  ORGANISM  Cylindrospermopsis
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025027.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13643.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Cylindrospermopsis"
                     /db_xref="taxon:77021"
     Protein         1..217
                     /product="DUF4145 domain-containing protein"
                     /calculated_mol_wt=25187
ORIGIN      
        1 mlsqlsskln cltcgsyvna ekvnsykmev qdehpifnsw ggtvttynef tflkcpqcfq
       61 pfltcteycn gsesyndfey aqvktlypis ntsstyrvpt yirksfqeaf lclnakafsa
      121 ciamciktie siceehkieg nslkekleim rqqeiinhhl yswasnlrlq dlshevdinf
      181 nqndaqqive ltdllieyif ryrknfelfk ktklgdk
//
LOCUS       WP_258005079             101 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF874 family protein, partial [Cylindrospermopsis raciborskii].
ACCESSION   WP_258005079
VERSION     WP_258005079.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017705.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05917.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         <1..101
                     /product="DUF874 family protein"
     Region          <24..89
                     /region_name="MARTX_Nterm"
                     /note="MARTX multifunctional-autoprocessing
                     repeats-in-toxin holotoxin N-terminal region; NF012221"
                     /db_xref="CDD:467957"
     Region          <51..>78
                     /region_name="DUF874"
                     /note="Helicobacter pylori protein of unknown function
                     (DUF874); pfam05917"
                     /db_xref="CDD:283549"
ORIGIN      
        1 grhwiksmgl flgtwqgtke grtgywlrww dktgnllpwa lelieqerql veqerqraeq
       61 erqraeqerq raeqerqeke rliaylrsqg vdphnlpnha g
//
LOCUS       WP_258005086              68 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3782 domain-containing protein, partial [Cylindrospermopsis
            raciborskii].
ACCESSION   WP_258005086
VERSION     WP_258005086.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024058.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12644.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         1..>68
                     /product="DUF3782 domain-containing protein"
     Region          <3..>68
                     /region_name="COG5493"
                     /note="Uncharacterized protein, contains PD-(D/E)XK
                     nuclease domain [General function prediction only]"
                     /db_xref="CDD:444244"
ORIGIN      
        1 mnelqrdree qarkwdeqnr kweentqrld rieaqnsatl eeiqkanrry esaigaigsr
       61 wglyseas
//
LOCUS       WP_258005128             101 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Salinibacter ruber].
ACCESSION   WP_258005128
VERSION     WP_258005128.1
KEYWORDS    RefSeq.
SOURCE      Salinibacter ruber
  ORGANISM  Salinibacter ruber
            Bacteria; Pseudomonadati; Rhodothermota; Rhodothermia;
            Rhodothermales; Salinibacteraceae; Salinibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024954.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13565.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Salinibacter ruber"
                     /db_xref="taxon:146919"
     Protein         1..101
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=11629
     Region          12..>100
                     /region_name="transpos_IS630"
                     /note="IS630 family transposase; NF033545"
                     /db_xref="CDD:468076"
ORIGIN      
        1 mdawvydvye svtartlrrw aqqfreeglq glidkhgrrs ersydsyfga gselrkvalh
       61 yladhpdcts telldelaqh vdddalptrr tvqrflrkmg g
//
LOCUS       WP_258005133            2133 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase [Cylindrospermopsis raciborskii].
ACCESSION   WP_258005133
VERSION     WP_258005133.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
REFERENCE   1  (residues 1 to 2133)
  AUTHORS   de la Cruz,J., Kressler,D. and Linder,P.
  TITLE     Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and
            related families
  JOURNAL   Trends Biochem Sci 24 (5), 192-198 (1999)
   PUBMED   10322435
REFERENCE   2  (residues 1 to 2133)
  AUTHORS   Aubourg,S., Kreis,M. and Lecharny,A.
  TITLE     The DEAD box RNA helicase family in Arabidopsis thaliana
  JOURNAL   Nucleic Acids Res 27 (2), 628-636 (1999)
   PUBMED   9862990
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012492.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00270.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2133
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         1..2133
                     /product="DEAD/DEAH box helicase"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=244610
     Region          32..245
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(57..63,186)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          <1009..>1144
                     /region_name="YprA"
                     /note="ATP-dependent helicase YprA, contains C-terminal
                     metal-binding DUF1998 domain [Replication, recombination
                     and repair]; COG1205"
                     /db_xref="CDD:440818"
     Region          <1204..1283
                     /region_name="Seryl_tRNA_N"
                     /note="Seryl-tRNA synthetase N-terminal domain; pfam02403"
                     /db_xref="CDD:426757"
     Region          1563..1657
                     /region_name="MZB"
                     /note="MrfA Zn-binding domain; pfam09369"
                     /db_xref="CDD:462776"
ORIGIN      
        1 mckgpyvslg mpfktgsigr dffphipldf ipylhqqeaf trlmpphyhs tliatgtgsg
       61 ktecflipvl ehcriysqeg gikailiypm nalatdqakr iakfinsips lkgkvtagly
      121 vgeedenptk vmtkekvitd kqtllasppd illtnykmld ylliqpnsqs lwqnnqpntl
      181 rylvvdefht fdgaqgtdla cllrrlkyrl qvpenfltcv gtsatlgvgs nakgsgnilr
      241 yaetifqecf ddqalieekr ipdmeflags llnvipiptq dykkvlsaen ypfpadyira
      301 qaelwlqrsg gydisepgad lgeewclelg rdlktlpivh nlvrilskks ytydeiieqi
      361 grrlhfpnnn spenryfnfl lldsifslma varsqdvans svvrpwanlr vhvwfrelkr
      421 mvatveptpr llfsddltae ikektktmpv ihcrscgmtg wgaikrsqnd dklilnlqef
      481 yqaffsynpl tcfifpknnp knnpknnpkn npknnldsdf aarlcskclk inlsdavtch
      541 scnsqelidv eipdilkvkk ankqsksvst hdcpyckatn slsilgsqaa sltstivstl
      601 yttqfnqdkk llafsdsvqd aahragfyns rtyrttlrta ifqavqnlsa gegkislkql
      661 vegfsdywlt tltkegdkdy tkyvatflps dlhwfqewek lienpdylsk eeltrllsfl
      721 kkrlewevva qfshratigt tlessglcsv gfnqsiieqs vqeliiylnn eiellsgvsy
      781 pkvhefifgi lnhlrllggi yqpvvanhgy ietggnlfvw snlwfmpkfs ysatiprflt
      841 tnngenswea vfsnstrgsw cenwtervfs sfgllmreqc kqilyqtldi ltktkilerr
      901 ksekgdvwgi pmnvieifpq gdvllcdscn hsvtlsphag vggtcynskc ngkyqvpssg
      961 lvyysqlyqr gqvhrvfaqe htsmlsrphr enlerlfits aracdpnlis atstlemgin
     1021 igdlssivlc sippnsanfq qrvgragrkq gnalisaiat gkahdlffya dprelidgrv
     1081 epagcylnaa ailkrqltaf cldcwvtqgv skeelpiqlq ksldavdkcd egrfpytwlk
     1141 fierhkkkll ddflslftnl regrektrdn tqdedynrvd geylrkelga figitpgdgi
     1201 hldilerlke inkerkrikn lidsigrtik kmgekpdaiq nleknqnlkq eleeeklafq
     1261 qlikeinqkn lfnfltdegm lpnytfpqag vtlrsvilrr qkpdehgsnr ettyknltpf
     1321 aytyerpsqi airelvpgcv fyaegrsiti dqidlklsep ekwricrnch yaapdfsnsq
     1381 ktcprcgdtm wgdqgrlhdv lrlkqviatt sdresrfgde nedrdssffk nhllvdfdps
     1441 fkeytylvks tefpfgfeyi srtkfreinl gktlphgknv eiagenffte gfrickgcgk
     1501 ilrknntqss qerdhaltck wrkrpeaaet ietlylyref esesirflmp dqrfwseqgl
     1561 hsfiaalqlg lkqkfggrvd hlqitqvqep qpdnklrksf lylydtvpgg tgylrqlcek
     1621 rvdsrpedlr qvfqqalnvl vncscqerge dgcykclfay rnsfhqdfts skvaqsllse
     1681 ilnhwsdlge eknqnlsgls insdlesele srliqaltsy trngeetklq plllhgkkay
     1741 ylkigemawn ielqvplgke eglplncrad fvfypahsrv nslpvvvftd gweyhqerid
     1801 qdleqrlgii ktgdywcwsl twadidkqln qkttfynsti dyggtksgmd sslnnpqinq
     1861 rreelyehyq csqlahledk sswewlmdyl yspidslwqn wallrtilqv qkknqtppai
     1921 edflapqlem wnrpqnyhsg vielsknlei ftlvdhkrnk elnkngslvl irlqeiyqsd
     1981 wqemlrmlnl yqflpytyam tttsdrdnls tmgptwetrl dtnihnnisr gvnkewqsik
     2041 eliieedlvp widqmienqw nlpvvgyele nkkgaviass elswveekvs ivttvedkhi
     2101 feqtgwysll ieevssqien lnqilkttik nny
//
LOCUS       WP_258005165             842 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein, partial [Salinibacter
            ruber].
ACCESSION   WP_258005165
VERSION     WP_258005165.1
KEYWORDS    RefSeq.
SOURCE      Salinibacter ruber
  ORGANISM  Salinibacter ruber
            Bacteria; Pseudomonadati; Rhodothermota; Rhodothermia;
            Rhodothermales; Salinibacteraceae; Salinibacter.
REFERENCE   1  (residues 1 to 842)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..842
                     /organism="Salinibacter ruber"
                     /db_xref="taxon:146919"
     Protein         <1..842
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          2..>490
                     /region_name="UvrD"
                     /note="Superfamily I DNA or RNA helicase [Replication,
                     recombination and repair]; COG0210"
                     /db_xref="CDD:439980"
     Region          680..>763
                     /region_name="PolC"
                     /note="DNA polymerase III, alpha subunit (gram-positive
                     type) [Replication, recombination and repair]; COG2176"
                     /db_xref="CDD:441779"
ORIGIN      
        1 pdlnpdqraa vtasmdpqlv vagpgtgktr vlvcraahli eheavtpsrl vlvtftrraa
       61 qqltsrlatl vgpeaqhvra gtihhfcykt lrahsapagv pddfivvddt itdafwqrwy
      121 eaherwcdan dlhsyrqvkt hvsriklgid tvsgrltegl raygemlgdr galdfddllv
      181 ktrdllrnhp dvradlvdet ravlvdefqd tdpvqfdiir rlgeagahly cvadddqsvy
      241 rfrgarpanl rryidrfdcs aergtrhvlt tnyrsnrsiy avaeavldad erlkqrgdir
      301 tsdagtqpvq lvacddpeae rthvlrqlrd wlddgaersd lavltrwnrr laaleraclr
      361 aglacetsqs ealldtppaq klhallrvvd arrrgrplda pmtellshll pddtmarlrd
      421 fgersmpdat lwtafqtvvs neqarrsagl dsatdrldqt yatitnllqn tqedgltiga
      481 ftrtvlrqlg dplqllrrya dtltdpasrp svrqagtvld ewrraqarda ragdpprlll
      541 hhrtpqitrl wrqlvrrald letdppaplp emqealfarp adegipplga ddvvltndle
      601 allrwaertg afsgstdtpq illlapdgal psgqktllgv dpddvhvvdp estfhspsvr
      661 lvkllqmtsg psapeplfpe yvmvdleats tdprhcrvae igalkvrdgt vvdrfselvq
      721 lpedltadeh etlrtvcgld pasdfdearp eaavwadfca ftgrpssptt asattsasca
      781 asptptrptp agprrttccp prtscfptfa attprtsarr swtttrippi apwptvriss
      841 af
//
LOCUS       WP_258005196             834 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxypeptidase regulatory-like domain-containing protein
            [Salinibacter ruber].
ACCESSION   WP_258005196
VERSION     WP_258005196.1
KEYWORDS    RefSeq.
SOURCE      Salinibacter ruber
  ORGANISM  Salinibacter ruber
            Bacteria; Pseudomonadati; Rhodothermota; Rhodothermia;
            Rhodothermales; Salinibacteraceae; Salinibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13620.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Salinibacter ruber"
                     /db_xref="taxon:146919"
     Protein         1..834
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /calculated_mol_wt=87661
     Region          69..118
                     /region_name="STN"
                     /note="Secretin and TonB N terminus short domain;
                     smart00965"
                     /db_xref="CDD:198033"
     Region          128..213
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
     Region          239..753
                     /region_name="FepA"
                     /note="Outer membrane receptor for ferrienterochelin and
                     colicins [Inorganic ion transport and metabolism];
                     COG4771"
                     /db_xref="CDD:443803"
ORIGIN      
        1 mtapgatpna phslpatall vvlllggpll fggravaqps tgdpaalgiq dapleqaleq
       61 matatgiglv ydaslvsgrr ascvtdtspp eallrcllag hpvdyvrtsr gtyvlrspvr
      121 rppqvgrlag ivrdgeagrl lpyahvrlpd aqefrgtvtd stgrfhvsgl lpgphtvvvs
      181 hlgyrrheat vyvppndtar heavlapspi aadslfidad ryglpsarre adcvpaaplr
      241 aggaaevpdv lgaagsvlgv tasapyadlh iqggppgght lrldgmpvrn pasagrllga
      301 fsplaleglt arkagfgalr gnalsgtlel thdlpapsdp ggqygtvrad srslgarlqg
      361 satlgdtpvs amvagrtsvw dvyqdaglhd lidrwstldp mlaaaqvsad tslaggslge
      421 iqftspsslr sgagvaaarr aargqegtsa vtdvllegev dvalgprwgl vwsgglthqq
      481 srvrignafa pqlqhrahts rlttaaemti glgahlqldg glrltsrpgq gtvfaeprga
      541 lrydrpvggl gtvglsvrgg lyrqfttqfd lirdgatavv pttrmwlplt dpltpprtyh
      601 laadltwapa prwqidmegy rkwqphllai dypalrdapa apaaptdpsr fiapshgfah
      661 ggglevayeg tsltgslrya ysraertfpg rfggrqvlvp wtdphrlalt aevplgagla
      721 leatgegvwg rrwgyrrayy ayltpddlga awderqldrp ethrlppryt ldagvrisrs
      781 wagvgvegre agsqpqcrrp serdagpapt ptpegtslsp gdgrhvvlgf pide
//
LOCUS       WP_258005199             159 aa            linear   BCT 02-MAR-2025
DEFINITION  PAS domain-containing protein [Salinibacter ruber].
ACCESSION   WP_258005199
VERSION     WP_258005199.1
KEYWORDS    RefSeq.
SOURCE      Salinibacter ruber
  ORGANISM  Salinibacter ruber
            Bacteria; Pseudomonadati; Rhodothermota; Rhodothermia;
            Rhodothermales; Salinibacteraceae; Salinibacter.
REFERENCE   1  (residues 1 to 159)
  AUTHORS   Hefti,M.H., Francoijs,K.J., de Vries,S.C., Dixon,R. and Vervoort,J.
  TITLE     The PAS fold. A redefinition of the PAS domain based upon
            structural prediction
  JOURNAL   Eur J Biochem 271 (6), 1198-1208 (2004)
   PUBMED   15009198
REFERENCE   2  (residues 1 to 159)
  AUTHORS   Ponting,C.P. and Aravind,L.
  TITLE     PAS: a multifunctional domain family comes to light
  JOURNAL   Curr Biol 7 (11), R674-R677 (1997)
   PUBMED   9382818
REFERENCE   3  (residues 1 to 159)
  AUTHORS   Zhulin,I.B., Taylor,B.L. and Dixon,R.
  TITLE     PAS domain S-boxes in Archaea, Bacteria and sensors for oxygen and
            redox
  JOURNAL   Trends Biochem Sci 22 (9), 331-333 (1997)
   PUBMED   9301332
REFERENCE   4  (residues 1 to 159)
  AUTHORS   Borgstahl,G.E., Williams,D.R. and Getzoff,E.D.
  TITLE     1.4 A structure of photoactive yellow protein, a cytosolic
            photoreceptor: unusual fold, active site, and chromophore
  JOURNAL   Biochemistry 34 (19), 6278-6287 (1995)
   PUBMED   7756254
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020036.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08447.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Salinibacter ruber"
                     /db_xref="taxon:146919"
     Protein         1..159
                     /product="PAS domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=18175
     Region          3..88
                     /region_name="PAS_3"
                     /note="PAS fold; pfam08447"
                     /db_xref="CDD:430001"
     Site            order(3,7,13,28..31,57,62)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(25,29,37,40..41,69,71)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          38..>151
                     /region_name="BaeS"
                     /note="Signal transduction histidine kinase [Signal
                     transduction mechanisms]; COG0642"
                     /db_xref="CDD:440407"
ORIGIN      
        1 miwdetserl fgyepggfpg tfaawaqrvh sddlpgvred ieqaidaqee frtefraqip
       61 ggqqrwiegr giveyddrge pirmlgihtd iterkkreqt lreakeraee aarlksamla
      121 nmsheirtpl tsitgfsevl eqnlsgparr lrhqdtqkq
//
LOCUS       WP_258005258             344 aa            linear   BCT 02-MAR-2025
DEFINITION  biotin/lipoyl-containing protein, partial [Salinibacter ruber].
ACCESSION   WP_258005258
VERSION     WP_258005258.1
KEYWORDS    RefSeq.
SOURCE      Salinibacter ruber
  ORGANISM  Salinibacter ruber
            Bacteria; Pseudomonadati; Rhodothermota; Rhodothermia;
            Rhodothermales; Salinibacteraceae; Salinibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012584.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00364.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Salinibacter ruber"
                     /db_xref="taxon:146919"
     Protein         1..>344
                     /product="biotin/lipoyl-containing protein"
     Region          6..>327
                     /region_name="SucB_Actino"
                     /note="2-oxoglutarate dehydrogenase, E2 component,
                     dihydrolipoamide succinyltransferase; TIGR02927"
                     /db_xref="CDD:200219"
ORIGIN      
        1 maqvdvempk mgesitegtv iawhkqpgde veqdeillei gtdkvdtevp spkggvltet
       61 lveegdtvev gtiiatldtd taaaevdadd appaeapaed eaaadeaadd asdadaedda
      121 daeddadaea tppetdseea aspapsgdev evvmpkmges itegtvvawy kdigeavaid
      181 etileigtdk vdtevpspae gvlteklvee getvevgtvv allaseaeag sveppasdep
      241 datqetapea deaelpstpp sgdgavpdad epqrapeeti trrgddgrfy splvrsiake
      301 eglrmseles legsgrggrv tkedvlayld ereeapaapa sape
//
LOCUS       WP_258005305             121 aa            linear   BCT 02-MAR-2025
DEFINITION  isoaspartyl peptidase/L-asparaginase, partial [Salinibacter ruber].
ACCESSION   WP_258005305
VERSION     WP_258005305.1
KEYWORDS    RefSeq.
SOURCE      Salinibacter ruber
  ORGANISM  Salinibacter ruber
            Bacteria; Pseudomonadati; Rhodothermota; Rhodothermia;
            Rhodothermales; Salinibacteraceae; Salinibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013292.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01112.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Salinibacter ruber"
                     /db_xref="taxon:146919"
     Protein         1..>121
                     /product="isoaspartyl peptidase/L-asparaginase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
     Region          12..>121
                     /region_name="IaaA"
                     /note="Isoaspartyl peptidase or L-asparaginase,
                     Ntn-hydrolase superfamily [Amino acid transport and
                     metabolism]; COG1446"
                     /db_xref="CDD:441055"
ORIGIN      
        1 mslslhsrqv etrgplllvh ggawdipdaa leahreglqa vlevgtaavq eetgalagvt
       61 tatraleahg afnagygaml nqdgaaelda gvmtgatldy gavmatqrle hpvgvarrll
      121 e
//
LOCUS       WP_258005325             153 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar FliJ family protein [Salinibacter ruber].
ACCESSION   WP_258005325
VERSION     WP_258005325.1
KEYWORDS    RefSeq.
SOURCE      Salinibacter ruber
  ORGANISM  Salinibacter ruber
            Bacteria; Pseudomonadati; Rhodothermota; Rhodothermia;
            Rhodothermales; Salinibacteraceae; Salinibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02050.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Salinibacter ruber"
                     /db_xref="taxon:146919"
     Protein         1..153
                     /product="flagellar FliJ family protein"
                     /GO_component="GO:0009288 - bacterial-type flagellum
                     [Evidence IEA]"
                     /GO_process="GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /calculated_mol_wt=17859
     Region          4..143
                     /region_name="FliJ"
                     /note="Flagellar biosynthesis chaperone FliJ [Cell
                     motility]; COG2882"
                     /db_xref="CDD:442129"
ORIGIN      
        1 mpgkkfrfsl qkvlelrqhe tekarqalad aeraleqked aleqaeghla ecrrrvdaar
       61 rqdpariqqa dafrqaarqt veetrdavea crerveqara elrerrraee aleelrsqer
      121 dqhdreqkka seaffdeqat lrhdrtdeal sll
//
LOCUS       WP_258005344              87 aa            linear   BCT 02-MAR-2025
DEFINITION  PEGA domain-containing protein [Salinibacter ruber].
ACCESSION   WP_258005344
VERSION     WP_258005344.1
KEYWORDS    RefSeq.
SOURCE      Salinibacter ruber
  ORGANISM  Salinibacter ruber
            Bacteria; Pseudomonadati; Rhodothermota; Rhodothermia;
            Rhodothermales; Salinibacteraceae; Salinibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019911.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08308.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Salinibacter ruber"
                     /db_xref="taxon:146919"
     Protein         1..87
                     /product="PEGA domain-containing protein"
                     /calculated_mol_wt=9092
     Region          2..56
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
ORIGIN      
        1 mlratpdrat valdgeevga tpatltevtt gtyevtfsrp ghktvtrrvd vsatdtdgdg
       61 naeaahrtpp ragpplglhl hrrpapr
//
LOCUS       WP_258005392             306 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4011 domain-containing protein, partial [Cylindrospermopsis
            raciborskii].
ACCESSION   WP_258005392
VERSION     WP_258005392.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024593.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13195.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         1..>306
                     /product="DUF4011 domain-containing protein"
     Region          <2..97
                     /region_name="DUF4011"
                     /note="Protein of unknown function (DUF4011); pfam13195"
                     /db_xref="CDD:463806"
     Region          204..>262
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            226..232
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350801"
ORIGIN      
        1 mnelttvqtw neklkilknl tkasrqslee tgvnilflaf gtlswededk stkllspltl
       61 vpvtlskers kgfyklspir edeeasiiin palclklkkf dinlseikpq nsyrdlinii
      121 kdrvlhqyps wevqdglfls lfsyaniaiv edfnkyekri fdhpmlqsls ggiteipyin
      181 dilqnsikds qvkpqnifqv ldadssqqvv ieaakrgdsf vvqgppgtgk sqtivnmite
      241 ligagksvll vaakdtavkv vydrlskcgl ehlclnlhns qainnkevie ellktitstn
      301 ssfdts
//
LOCUS       WP_258005154             463 aa            linear   BCT 02-MAR-2025
DEFINITION  NosD domain-containing protein [Salinibacter ruber].
ACCESSION   WP_258005154
VERSION     WP_258005154.1
KEYWORDS    RefSeq.
SOURCE      Salinibacter ruber
  ORGANISM  Salinibacter ruber
            Bacteria; Pseudomonadati; Rhodothermota; Rhodothermia;
            Rhodothermales; Salinibacteraceae; Salinibacter.
REFERENCE   1  (residues 1 to 463)
  AUTHORS   Holloway,P., McCormick,W., Watson,R.J. and Chan,Y.K.
  TITLE     Identification and analysis of the dissimilatory nitrous oxide
            reduction genes, nosRZDFY, of Rhizobium meliloti
  JOURNAL   J Bacteriol 178 (6), 1505-1514 (1996)
   PUBMED   8626275
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016906.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05048.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Salinibacter ruber"
                     /db_xref="taxon:146919"
     Protein         1..463
                     /product="NosD domain-containing protein"
                     /calculated_mol_wt=50036
     Region          24..426
                     /region_name="NosD_copper_fam"
                     /note="nitrous oxide reductase family maturation protein
                     NosD; TIGR04247"
                     /db_xref="CDD:275079"
ORIGIN      
        1 mrffwaltvg lllgvgpgla qpslqariga aapgdtivvt ggvhegpfvv diplvlrgrn
       61 rphlkgdeqt hvvavdaadv tiegfrisgs gtdlgddhag vmvraprati rdnhlsdvlh
      121 gvyvkgadra vvvenviegp ptvtrrvspe earrhdcsvp pgggdcavpl pvpqrgngih
      181 lwsslhntvt hntvhhtrdg vyfshsnhty aarntihdvr yglhymysdd ntfehnrffd
      241 nesgsalmys triavrhnvf rdnrsqrgyg lllqtvsksr fahnrmiqng tgvylenstr
      301 ntfadnvvas nyrgirvtgs smenrfgrnv irgnlntatv sgaratnawh vdgrgnywgp
      361 rglldlnadg vselphrtvd lfgerredfp yvdllagspg lslladalar vpgtgiptit
      421 dehplvapps ppeeegatgl gslftlgivl ltvgavalrr rvv
//
LOCUS       WP_258005414             152 aa            linear   BCT 02-MAR-2025
DEFINITION  protein kinase domain-containing protein, partial
            [Cylindrospermopsis raciborskii].
ACCESSION   WP_258005414
VERSION     WP_258005414.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
REFERENCE   1  (residues 1 to 152)
  AUTHORS   Hunter,T. and Plowman,G.D.
  TITLE     The protein kinases of budding yeast: six score and more
  JOURNAL   Trends Biochem Sci 22 (1), 18-22 (1997)
   PUBMED   9020587
REFERENCE   2  (residues 1 to 152)
  AUTHORS   Hanks,S.K. and Hunter,T.
  TITLE     Protein kinases 6. The eukaryotic protein kinase superfamily:
            kinase (catalytic) domain structure and classification
  JOURNAL   FASEB J 9 (8), 576-596 (1995)
   PUBMED   7768349
REFERENCE   3  (residues 1 to 152)
  AUTHORS   Hanks,S.K. and Quinn,A.M.
  TITLE     Protein kinase catalytic domain sequence database: identification
            of conserved features of primary structure and classification of
            family members
  JOURNAL   Methods Enzymol 200, 38-62 (1991)
   PUBMED   1956325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00069.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         <1..152
                     /product="protein kinase domain-containing protein"
                     /GO_function="GO:0004672 - protein kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006468 - protein phosphorylation
                     [Evidence IEA]"
     Region          1..>85
                     /region_name="SPS1"
                     /note="Serine/threonine protein kinase [Signal
                     transduction mechanisms]; COG0515"
                     /db_xref="CDD:440281"
     Region          <42..>149
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 ikgiplskyi eengqltevl alkyidqisq alecvhkdny lhrdikpdni llrnnykdtv
       61 lidfglarii atqsmtnslt hgyapvdifa tkfartgkkn ssdyevvkei ltefelivds
      121 yeqpidrpge yqeqkkyvla pvlwtinrkv pv
//
LOCUS       WP_258005441             179 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase, partial [Salinibacter ruber].
ACCESSION   WP_258005441
VERSION     WP_258005441.1
KEYWORDS    RefSeq.
SOURCE      Salinibacter ruber
  ORGANISM  Salinibacter ruber
            Bacteria; Pseudomonadati; Rhodothermota; Rhodothermia;
            Rhodothermales; Salinibacteraceae; Salinibacter.
REFERENCE   1  (residues 1 to 179)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 179)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Salinibacter ruber"
                     /db_xref="taxon:146919"
     Protein         <1..>179
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <1..>179
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
ORIGIN      
        1 flyeqvleie lddigpldra drpkrlptvl sreevrrlfg amstgpnrli ahllygsglr
       61 lsealrlrvk eldvgtsrlh vrdgkggtdr ttvlperlhg plrrhlktvk aqheadcadg
      121 vggvylpdal aekypnaate wrwqyvfpst tlsedprsga vrrhhrsdsa vqravkkaa
//
LOCUS       WP_258005492             236 aa            linear   BCT 02-MAR-2025
DEFINITION  NifB/NifX family molybdenum-iron cluster-binding protein [Vibrio
            diazotrophicus].
ACCESSION   WP_258005492
VERSION     WP_258005492.1
KEYWORDS    RefSeq.
SOURCE      Vibrio diazotrophicus
  ORGANISM  Vibrio diazotrophicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 236)
  AUTHORS   Rubio,L.M., Rangaraj,P., Homer,M.J., Roberts,G.P. and Ludden,P.W.
  TITLE     Cloning and mutational analysis of the gamma gene from Azotobacter
            vinelandii defines a new family of proteins capable of
            metallocluster binding and protein stabilization
  JOURNAL   J Biol Chem 277 (16), 14299-14305 (2002)
   PUBMED   11823455
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014620.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02579.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Vibrio diazotrophicus"
                     /db_xref="taxon:685"
     Protein         1..236
                     /product="NifB/NifX family molybdenum-iron cluster-binding
                     protein"
                     /calculated_mol_wt=25548
     Region          7..>78
                     /region_name="DIMCO_N"
                     /note="Dinitrogenase iron-molybdenum cofactor, N-terminal;
                     pfam16844"
                     /db_xref="CDD:435604"
     Region          102..217
                     /region_name="NifX_NifB"
                     /note="This CD represents a family of iron-molybdenum
                     cluster-binding proteins that includes NifB, NifX, and
                     NifY, all of which are involved in the synthesis of an
                     iron-molybdenum cofactor (FeMo-co) that binds the active
                     site of the dinitrogenase enzyme. This...; cl00252"
                     /db_xref="CDD:469689"
ORIGIN      
        1 mmmdntisdq aairialask slpnielrsl lglliqhlge pltetklvgl spkafrlmvg
       61 slgsgptrkd vsnalhvlcn peisdvsape valqtpisgp klrvaltsnq gemvnghygs
      121 clrvliyevn atqhqlvevr emptekkgee raiamldrir dchmlftlsi ggpaaarvtr
      181 anihpikkta paeasavlkd lsqviatnpp pwvkrilgfe ksavefaqle leesye
//
LOCUS       WP_258005481             601 aa            linear   BCT 02-MAR-2025
DEFINITION  caspase family protein [Vibrio diazotrophicus].
ACCESSION   WP_258005481
VERSION     WP_258005481.1
KEYWORDS    RefSeq.
SOURCE      Vibrio diazotrophicus
  ORGANISM  Vibrio diazotrophicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 601)
  AUTHORS   Wilson,K.P., Black,J.A., Thomson,J.A., Kim,E.E., Griffith,J.P.,
            Navia,M.A., Murcko,M.A., Chambers,S.P., Aldape,R.A., Raybuck,S.A.
            et al.
  TITLE     Structure and mechanism of interleukin-1 beta converting enzyme
  JOURNAL   Nature 370 (6487), 270-275 (1994)
   PUBMED   8035875
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012862.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00656.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Vibrio diazotrophicus"
                     /db_xref="taxon:685"
     Protein         1..601
                     /product="caspase family protein"
                     /GO_function="GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=67018
     Region          <147..>194
                     /region_name="ATP-synt_Fo_b"
                     /note="F-type ATP synthase, membrane subunit b; cl21478"
                     /db_xref="CDD:473877"
     Region          357..598
                     /region_name="COG4249"
                     /note="Uncharacterized conserved protein, contains caspase
                     domain [General function prediction only]"
                     /db_xref="CDD:443391"
ORIGIN      
        1 mkrnyvvsgi llalspslaf atsdtsfefs ntmhgtvcse npdvwslgge lkidapisln
       61 gmsvdrqgvw einnnvdhll gkevkttqhy mktalgcvks ddpialvgav aslyekqfts
      121 lssieipaai pepdlpeapk vikdqfetkq qfeqrveqir qarqqeiasi qqkyredvea
      181 rnqkirelqa sieqrkgsmg dkktllvaka frdvmgkpnv saksydaekq qmhitfkasn
      241 qnyqrdlvln vpldkakevf tnvdqldlal fytfdeqqle lvnivgrysn iefpgdvass
      301 qykpesltvv ldsktpaplt elemqnpnli dsfevdsrlt vtdstasdel kslldkapqa
      361 esnsaswlfn laiedyansd qvayarhsgk mmsdvakkvl gvperhvyel idrdatsgai
      421 kdklrlmldn vsegdtvyfy ysghgipaip endpfilpqd kipdyitdda ffkldniykt
      481 lasskaskii vmvdscfsga tdgvsvikgv aasrlapkkv aidpermvvi tagrdkeysn
      541 myqekghrlf syylmksmie gnrdigtlyq dvfehvksts femgdlkrqh ptisgnqtis
      601 l
//
LOCUS       WP_258005528             366 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase [Vibrio diazotrophicus].
ACCESSION   WP_258005528
VERSION     WP_258005528.1
KEYWORDS    RefSeq.
SOURCE      Vibrio diazotrophicus
  ORGANISM  Vibrio diazotrophicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 366)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Vibrio diazotrophicus"
                     /db_xref="taxon:685"
     Protein         1..366
                     /product="PfkB family carbohydrate kinase"
                     /calculated_mol_wt=39733
     Region          6..362
                     /region_name="PRK09954"
                     /note="sugar kinase"
                     /db_xref="CDD:182165"
ORIGIN      
        1 mfvtpreqqi lailrenpmi qqqeladqlm isrsaiaghi mnltnkglik gkgyilasqk
       61 taivigganm dlcgkasvpl lngdsnpgtl hyspggvarn iadnlarlgs kvelissign
      121 dqwgeqlvsa cidagvgvsh llrcqqgrta tylsihdneg emqialndmk vleqlnaeql
      181 tkhkslishs dlvvidanls edalsylfnc idntriyvdp vsankalklk pylsqidllk
      241 pnlieaells gikasseddy pricdalhhl gvkevvlslg skgifasnqk eslrlkprtt
      301 svtnvtgagd almaglahat lemwswnksi efafscaela tqsydtinpr msdravqrlm
      361 emnhae
//
LOCUS       WP_258005588              93 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6506 family protein [Coxiella burnetii].
ACCESSION   WP_258005588
VERSION     WP_258005588.1
KEYWORDS    RefSeq.
SOURCE      Coxiella burnetii
  ORGANISM  Coxiella burnetii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Coxiellaceae; Coxiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039801.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20116.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Coxiella burnetii"
                     /db_xref="taxon:777"
     Protein         1..93
                     /product="DUF6506 family protein"
                     /calculated_mol_wt=10333
     Region          1..89
                     /region_name="DUF6506"
                     /note="Family of unknown function (DUF6506); pfam20116"
                     /db_xref="CDD:437948"
ORIGIN      
        1 mflmpgfdpk tnistmekeg frfkavgidm nhkeqaieva rqlhregyqm ielcggfapn
       61 wiskieealg nsipvggvfy gpefrkslvn lsl
//
LOCUS       WP_258005629             422 aa            linear   BCT 02-MAR-2025
DEFINITION  trypsin-like peptidase domain-containing protein [Castellaniella
            caeni].
ACCESSION   WP_258005629
VERSION     WP_258005629.1
KEYWORDS    RefSeq.
SOURCE      Castellaniella caeni
  ORGANISM  Castellaniella caeni
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Castellaniella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024758.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13365.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Castellaniella caeni"
                     /db_xref="taxon:266123"
     Protein         1..422
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /calculated_mol_wt=43370
     Region          92..>412
                     /region_name="degP_htrA_DO"
                     /note="periplasmic serine protease, Do/DeqQ family;
                     TIGR02037"
                     /db_xref="CDD:273938"
ORIGIN      
        1 mqrlwlifaq tvtvclgvlf lvstlrpqwl pggtawmtga gqvadggqsa gapaqgpgaa
       61 aggggapaqg gaagapatgl pgaasarglg vlsyapavqr aapsvvnvyt rkhidvplvp
      121 mppdphlqql lrsvpgftqr qnstslgsgv ivradgyilt nnhviesada ievslqdgrq
      181 asarlvgadp esdlavlkie ldklptivfd pdrsvrvgdv vlaignpfgv gqtttqgivs
      241 algrnrlgin tyedfiqtda ainpgnsgga lidtegrlvg intaiysesg gslgigfaip
      301 sgpahqildq iiehgrvqrg wlglepqdit pdlaqafhlr haqgaivarv lprgpaarag
      361 vqvgdiital dgqpvrdsfd llnrlapmks gdtahlqvlr ggktvsmdvt vgvrpaaqsa
      421 rr
//
LOCUS       WP_258005652             137 aa            linear   BCT 02-MAR-2025
DEFINITION  phage integrase central domain-containing protein [Castellaniella
            caeni].
ACCESSION   WP_258005652
VERSION     WP_258005652.1
KEYWORDS    RefSeq.
SOURCE      Castellaniella caeni
  ORGANISM  Castellaniella caeni
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Castellaniella.
REFERENCE   1  (residues 1 to 137)
  AUTHORS   Laxmikanthan,G., Xu,C., Brilot,A.F., Warren,D., Steele,L., Seah,N.,
            Tong,W., Grigorieff,N., Landy,A. and Van Duyne,G.D.
  TITLE     Structure of a Holliday junction complex reveals mechanisms
            governing a highly regulated DNA transaction
  JOURNAL   Elife 5, e14313 (2016)
   PUBMED   27223329
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 137)
  AUTHORS   Kamadurai,H.B., Jain,R. and Foster,M.P.
  TITLE     Crystallization and structure determination of the core-binding
            domain of bacteriophage lambda integrase
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 64 (Pt 6), 470-473
            (2008)
   PUBMED   18540053
REFERENCE   3  (residues 1 to 137)
  AUTHORS   Biswas,T., Aihara,H., Radman-Livaja,M., Filman,D., Landy,A. and
            Ellenberger,T.
  TITLE     A structural basis for allosteric control of DNA recombination by
            lambda integrase
  JOURNAL   Nature 435 (7045), 1059-1066 (2005)
   PUBMED   15973401
REFERENCE   4  (residues 1 to 137)
  AUTHORS   Aihara,H., Kwon,H.J., Nunes-Duby,S.E., Landy,A. and Ellenberger,T.
  TITLE     A conformational switch controls the DNA cleavage activity of
            lambda integrase
  JOURNAL   Mol Cell 12 (1), 187-198 (2003)
   PUBMED   12887904
  REMARK    Erratum:[Mol Cell. 2003 Sep;12(3):793]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047080.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22022.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Castellaniella caeni"
                     /db_xref="taxon:266123"
     Protein         1..137
                     /product="phage integrase central domain-containing
                     protein"
                     /calculated_mol_wt=15169
     Region          <13..>117
                     /region_name="FimB"
                     /note="Integrase/recombinase, includes phage integrase
                     [Replication, recombination and repair, Mobilome:
                     prophages, transposons]; COG0582"
                     /db_xref="CDD:440347"
ORIGIN      
        1 mvhrqyevpk sgdegrqstp kqiqrvfkkd vfsvlqplti yditrahlld isgrvekrgs
       61 lsvaeklrtw stqlfiyasv vvpnmgenps kdldvvalpl ppvennpflr mgivpllsat
      121 phrckpgieh lpqgscs
//
LOCUS       WP_258005656             566 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Castellaniella
            caeni].
ACCESSION   WP_258005656
VERSION     WP_258005656.1
KEYWORDS    RefSeq.
SOURCE      Castellaniella caeni
  ORGANISM  Castellaniella caeni
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Castellaniella.
REFERENCE   1  (residues 1 to 566)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 566)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 566)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 566)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Castellaniella caeni"
                     /db_xref="taxon:266123"
     Protein         1..566
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=61287
     Region          4..>566
                     /region_name="ABC2_perm_RbbA"
                     /note="ribosome-associated ATPase/putative transporter
                     RbbA; NF033858"
                     /db_xref="CDD:468210"
ORIGIN      
        1 mdkhfgqvqa lrglsahihy grltglvgpd gagkttlmri ltgllvpnag hvtlagfdvv
       61 kdndaihaas gympqrfgly edlsvmenmr lyaqlrgmda nrnadlfael ldftrlgpft
      121 krlagklsgg mkqklglaca lmarpkvlll depgvgvdpv srqdlwrmvq altdkgmavv
      181 wstayldeae rcesvlllnq gqllfdgppq qltahlegrs frlenvgter ravltealel
      241 esvsdgviqg agvrvvlrdg arasqiqala dsvrvelaqv parfedafid llgggpggts
      301 tlaerlppvd lgsdiavscc nltkrfgeft atdqvsfevq kgeifgllgp ngagksttfk
      361 mlcgllkpta geahvvghdl rratgaaksr lgymaqkfsl ygllsvqqnl efsagvygle
      421 gntrreriae mietfdlgdw lsatpdslpl ghkqrlalac slmhrppvlf ldeptsgvdp
      481 itrrefwthi nglarkgvti mvtthfmdea eycdrvamls rarlialdtp dalkraaana
      541 ehpdptmeda fihlvesadr eleaaa
//
LOCUS       WP_258005681             196 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Castellaniella
            caeni].
ACCESSION   WP_258005681
VERSION     WP_258005681.1
KEYWORDS    RefSeq.
SOURCE      Castellaniella caeni
  ORGANISM  Castellaniella caeni
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Castellaniella.
REFERENCE   1  (residues 1 to 196)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Castellaniella caeni"
                     /db_xref="taxon:266123"
     Protein         <1..196
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..130
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
ORIGIN      
        1 eqgrgfavva sevralaqrs agaakeikal iddsvgrvra gsdqvnraga tmdeivqavs
       61 rvsdimgeit aatveqstgi dqvnlaiaqm davtqqnall vqqaataags leslaaeiet
      121 slavfqlseq alagdiales alshealgaa saarlpgaaa pdavaldvss veaatrresp
      181 ravravaadn edwkef
//
LOCUS       WP_258005684             251 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Castellaniella
            caeni].
ACCESSION   WP_258005684
VERSION     WP_258005684.1
KEYWORDS    RefSeq.
SOURCE      Castellaniella caeni
  ORGANISM  Castellaniella caeni
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Castellaniella.
REFERENCE   1  (residues 1 to 251)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Castellaniella caeni"
                     /db_xref="taxon:266123"
     Protein         <1..251
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..247
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(7..8,11..12,15,18..19,21..22,25,28..29,32,35..36,
                     39..40,43,46..47,49..50,54,56..57,60,63..64,67..68,71,74,
                     77..78,81,85,88,95,99,102,105..106,109,112..113,116..117,
                     119..120,123..124,137..138,141,144..145,148,151..152,
                     154..155,158..159,162,165..166,169,172..173,175..176,
                     179..180,182..183,186,189..190)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            77..110
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 qaaslqetaa smeelsstvr qnadnarqan qlasgasrta hqgeeavegm vatmqriaer
       61 stritdiigv idgiafqtni lalnaaveaa rageqgkgfa vvagevrala qrsaeaarei
      121 kqlieaasqe vqsgtrqagq tgtlmqevlt avdrvtsims eiasasneqs tgidqinlav
      181 gqmdqvtqqn aalveeaaaa adslsaqads laatvaqfkt gdegrpddpp aayahapgqq
      241 aphpralrql a
//
LOCUS       WP_258005721             515 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Cylindrospermopsis raciborskii].
ACCESSION   WP_258005721
VERSION     WP_258005721.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
REFERENCE   1  (residues 1 to 515)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 515)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 515)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 515)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         1..>515
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          75..515
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
ORIGIN      
        1 mslpqdlhrl yrllpshrrq qllwlfilml ltatsevisl gavlpflgal snangvlqnp
       61 tfqplwqkle vsttfhlvlw lagtfgmavi lanilriitl rsqlrfaaai aselscevyr
      121 rvlyqpysfh vrhssnelia gitsdislvs stilpqtlll avntmivial vlsvviispg
      181 iaigtavtlg vsywillevs krtlssnsyt itsqnrflik ylqeglggir dvilernqgi
      241 fvnsyrqvdr plrlavanna lissvpryii epiamvaict iavvmayqqe qlarvvpilg
      301 alalaanrll palqgcfasi aslrgnqasl ekvleklaip vdmlpipqgm gkalnqslql
      361 rnvwfrysps tpwvlrdlcl eikanttvgf igttgsgkst tadlilgllq pekgeilvdg
      421 ellegerlan wqrtiahvpq siflsdatia eniafgvpla eidmervqea arlaqiadfi
      481 egreggyeei vgergirlsg gqrqrigiar alykr
//
LOCUS       WP_258005791             113 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Cylindrospermopsis raciborskii].
ACCESSION   WP_258005791
VERSION     WP_258005791.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
REFERENCE   1  (residues 1 to 113)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 113)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 113)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 113)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         <1..113
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <1..88
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
ORIGIN      
        1 aarlaqiadf iegreggyee ivgergirls ggqrqrigia ralykgasvi vldestsald
       61 nstekevmaa ieglshqltv iliahrlsey agkmrshfsv vsgtglsrrr spw
//
LOCUS       WP_258005808             337 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase-fold protein [Proteus vulgaris].
ACCESSION   WP_258005808
VERSION     WP_258005808.1
KEYWORDS    RefSeq.
SOURCE      Proteus vulgaris
  ORGANISM  Proteus vulgaris
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Proteus.
REFERENCE   1  (residues 1 to 337)
  AUTHORS   Goins,C.M., Dajnowicz,S., Smith,M.D., Parks,J.M. and Ronning,D.R.
  TITLE     Mycolyltransferase from Mycobacterium tuberculosis in covalent
            complex with tetrahydrolipstatin provides insights into antigen 85
            catalysis
  JOURNAL   J Biol Chem 293 (10), 3651-3662 (2018)
   PUBMED   29352107
REFERENCE   2  (residues 1 to 337)
  AUTHORS   van Straaten,K.E., Gonzalez,C.F., Valladares,R.B., Xu,X.,
            Savchenko,A.V. and Sanders,D.A.
  TITLE     The structure of a putative S-formylglutathione hydrolase from
            Agrobacterium tumefaciens
  JOURNAL   Protein Sci 18 (10), 2196-2202 (2009)
   PUBMED   19653299
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012958.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00756.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Proteus vulgaris"
                     /db_xref="taxon:585"
     Protein         1..337
                     /product="alpha/beta hydrolase-fold protein"
                     /calculated_mol_wt=38694
     Region          2..74
                     /region_name="Enterochelin_N"
                     /note="Enterochelin esterase, N-terminal; pfam11806"
                     /db_xref="CDD:432089"
     Region          <103..336
                     /region_name="Fes"
                     /note="Enterochelin esterase or related enzyme [Inorganic
                     ion transport and metabolism]; COG2382"
                     /db_xref="CDD:441948"
ORIGIN      
        1 mlgspegnhd plthlpnsdi wyrsyivpnd tlmqyklapd vpvienaepf eqrrailtta
       61 qadplnshds psqsediynh fsllsldrqr echlpdildr amkgkteivr fhseilnndr
      121 eialylpaqk metprllvlf dgqtyrrqyg idkffdkqie egklppimil fvdsidgdrr
      181 gielppnpdf yrfladelfv wlekekgihv sgeetivsgs sygglasswi afnrperfgk
      241 vlsmsgsyww apeneepewl irqfkqadkk plqffleagl fesrgdkggi lnnnrhlkqv
      301 leqkgypvks lemasghdyi swcetlylgt kaltqen
//
LOCUS       WP_258005837             100 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Cylindrospermopsis raciborskii].
ACCESSION   WP_258005837
VERSION     WP_258005837.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
REFERENCE   1  (residues 1 to 100)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 100)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 100)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 100)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         <1..>100
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <1..90
                     /region_name="SunT"
                     /note="ABC-type bacteriocin/lantibiotic exporters, contain
                     an N-terminal double-glycine peptidase domain [Defense
                     mechanisms]; COG2274"
                     /db_xref="CDD:441875"
ORIGIN      
        1 vgergirlsg gqrqrigiar alykrasviv ldeatsaldn ttekeviaai eglshqltvi
       61 liahrlstle kcdrifqldq gqvyqegdrd gdsptnsatg
//
LOCUS       WP_258005841             905 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Cylindrospermopsis raciborskii].
ACCESSION   WP_258005841
VERSION     WP_258005841.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
REFERENCE   1  (residues 1 to 905)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         1..905
                     /product="AMP-binding protein"
                     /calculated_mol_wt=102376
     Region          50..531
                     /region_name="A_NRPS"
                     /note="The adenylation domain of nonribosomal peptide
                     synthetases (NRPS); cd05930"
                     /db_xref="CDD:341253"
     Site            order(184,187..192,194..195)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341253"
     Site            order(187..188,303..304,324..328,354,419,431,434,525)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341253"
     Region          547..623
                     /region_name="AcpP"
                     /note="Acyl carrier protein [Lipid transport and
                     metabolism]; COG0236"
                     /db_xref="CDD:440006"
     Region          647..884
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 mlstipanil kqrfvankll tapsgfigfd akdinksits rfeqqvnkyp daiaikttye
       61 tltyyrfnqr anqlanailc qrgeklevia lllekgldfi tgifgglktg kiivpldstf
      121 pvdrlayime daqavvlitn nqnlplarkl airdcqifni deisnhvste nphihilpen
      181 payiiytsgs tgkpkgvvqs hinslhycmt dtntllvspe drvifiyscs tlggllcify
      241 tllngaslys ydvkkeglnn lvnylvreei tiyhsfttlf rhfvdtltdd vqftkirlvk
      301 lggeatlird venyrkyfan ecilygslga seagtfrnfl idkgtkiqgs nvpigyavdg
      361 mevvllddag vevqmgnvge iaikskyltl gywqkpeltk faftshfqdg dtkiyrtgdl
      421 gimepdgcli ymgrkdfqvk irgfrievte iemalfqsgn fkevvviare disqekrlla
      481 ylvpkhqpap ttqelrrylq gklpeymips afvfldalpl tpngktdrra lpapeltkpe
      541 itanfeepid dieyqliqiw eqflgikpir rqdnffelgg nsllavrvfa ameqkftqkl
      601 slaflfpvgt vaaiaeiire nqnlvntvrp nfhhsslvai qplgsqpplf lihslggell
      661 cyrhlairlg neqpvyglqc qgldgekppl lrvedmathy lqeirtiqpq gpyfiggysf
      721 ggvvayemar qlekqgekvs flamldtcrp gyaqrlsflq riplhlrnii kggsryfatk
      781 vlgwskhaqh ylkyylrvaf eleqkffnsk hnhkyitimd antqalreyk fpiysgkatl
      841 lrtedehrgn hlgmkydhqf gwgdivtgel dvyhvpgshl slldepyvgv vakklqecle
      901 evrks
//
LOCUS       WP_258005754             851 aa            linear   BCT 02-MAR-2025
DEFINITION  nidogen-like domain-containing protein [Cylindrospermopsis
            raciborskii].
ACCESSION   WP_258005754
VERSION     WP_258005754.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
REFERENCE   1  (residues 1 to 851)
  AUTHORS   Ciccarelli,F.D., Doerks,T. and Bork,P.
  TITLE     AMOP, a protein module alternatively spliced in cancer cells
  JOURNAL   Trends Biochem Sci 27 (3), 113-115 (2002)
   PUBMED   11893501
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017889.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06119.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         1..851
                     /product="nidogen-like domain-containing protein"
                     /GO_process="GO:0007160 - cell-matrix adhesion [Evidence
                     IEA]"
                     /calculated_mol_wt=90220
     Region          <66..>128
                     /region_name="M34_peptidase"
                     /note="Peptidase family M34 includes the C-terminal
                     catalytic domain of anthrax lethal factor (ATLF), the
                     protective antigen-binding domains of ATLF and edema
                     factor, and Pro-Pro endopeptidase; cl40422"
                     /db_xref="CDD:394792"
     Region          <299..>736
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          302..391
                     /region_name="NIDO"
                     /note="Nidogen-like; pfam06119"
                     /db_xref="CDD:461833"
     Region          <419..482
                     /region_name="Calx-beta"
                     /note="Calx-beta domain; cl02522"
                     /db_xref="CDD:413355"
     Region          787..849
                     /region_name="DUF4114"
                     /note="Domain of unknown function (DUF4114); pfam13448"
                     /db_xref="CDD:433216"
ORIGIN      
        1 makitnqgln salhqlwvfs lsgdfwqvld tafgteynre naqilrlqwq kgdfsqlpqi
       61 eivdsgilgd gngaysssen riylssklie kgtlglvskv lieeighyvd ayintvdspg
      121 degaifaalv lgevlspnvl aelrnendgg wlevngqnle veynnptvll nglggqagfg
      181 esflnreddn stridlvsvf gstglnffgn kytelylnnn ggvsfkneis tytpatirgt
      241 tnnpfisafw advdtrgsvv patpggnstg snllwydldp ntrtftatwd dvgyfdrktn
      301 llnafqlslt qvgnsgdfdi tfryeavnwt tgdasggqng lggtvaragy tsgngvnyfe
      361 lpqsgnlndm lglssssnvr ipgtfiynvr ngevqtinla vsptiatedg tanliytftr
      421 tgsttntltv nytiggtatn gsdysnigts vtfaagssta tvtvdptadt tvesdetvgl
      481 tlatgagyni gttsvvtgti tnddfpsitl avspssvted gtanlvytft rtgsntntlk
      541 vnytiggtat ngsdysstgt svtfgaglst ttvivdpiad ttvegdetve ltlapgtgyn
      601 idttsvvtgt itnddrtltp itnyapdvni stglvfstng ggnlsldtnr lsmsnevigv
      661 qngtksnfnh lfglyevvdp qggintekgv lkpgdsdyaf yalttarvkd fivqagnsds
      721 pstatqlvsg vslqgnkfya pfviancgty fpnlqqgved fiaaengdvn rfanspkyvq
      781 dlvatevgne fnnaprfvqe pvayfsfgsa npdksphlrs ygngvygfed lpatatqysn
      841 ndfndavfal s
//
LOCUS       WP_258005933             272 aa            linear   BCT 02-MAR-2025
DEFINITION  Uma2 family endonuclease, partial [Cylindrospermopsis raciborskii].
ACCESSION   WP_258005933
VERSION     WP_258005933.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
REFERENCE   1  (residues 1 to 272)
  AUTHORS   Nakamura,A., Sosa,A., Komori,H., Kita,A. and Miki,K.
  TITLE     Crystal structure of TTHA1657 (AT-rich DNA-binding protein; p25)
            from Thermus thermophilus HB8 at 2.16 A resolution
  JOURNAL   Proteins 66 (3), 755-759 (2007)
   PUBMED   17154156
REFERENCE   2  (residues 1 to 272)
  AUTHORS   Feder,M. and Bujnicki,J.M.
  TITLE     Identification of a new family of putative PD-(D/E)XK nucleases
            with unusual phylogenomic distribution and a new type of the active
            site
  JOURNAL   BMC Genomics 6, 21 (2005)
   PUBMED   15720711
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017496.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05685.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         <1..272
                     /product="Uma2 family endonuclease"
     Region          <12..104
                     /region_name="PDDEXK_nuclease-like"
                     /note="PDDEXK family nucleases; cl40440"
                     /db_xref="CDD:477358"
     Region          <130..>260
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
ORIGIN      
        1 lrrsyvlwke kvppfivief askngkeekd sspppegdei dpetgkpkka gkfwvyeqav
       61 kvpyyaifng fkgtlevyhl erkrykeika nrrghyaipe mgielgilyd nqkpptpwlr
      121 wwdnkgnlll tgnelaeqae aiairerlak eqaetiasqe rlakeqerea keqaetiasq
      181 erlakeqere akeraeeias qerlakerae tiasqerlak eraetiasqe rlakeraeti
      241 asqermakeq erqqkeklaa ylrslgidpe ki
//
LOCUS       WP_258005974             463 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1601 domain-containing protein [Coxiella burnetii].
ACCESSION   WP_258005974
VERSION     WP_258005974.1
KEYWORDS    RefSeq.
SOURCE      Coxiella burnetii
  ORGANISM  Coxiella burnetii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Coxiellaceae; Coxiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019293.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07671.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Coxiella burnetii"
                     /db_xref="taxon:777"
     Protein         1..463
                     /product="DUF1601 domain-containing protein"
                     /calculated_mol_wt=53331
     Region          32..>403
                     /region_name="PRK09169"
                     /note="hypothetical protein; Validated"
                     /db_xref="CDD:236394"
ORIGIN      
        1 mkgfrrhant nlhdpvplir dffrrakdqr phpqpltard yatireilea rrhrrfngqs
       61 vanlllaiay hhtqwrllpr slaaqlwdai aknverlnpq giantlwtla tmnvrrrele
      121 vqglsdrlld avyynaeqfn sqdiantlwa laamgmrwre leeqglsdrl ldavrydaer
      181 fnpqgiantl walvamgmtw geleaqelnd rlldavgsna prfnsqditn tlwalatmgm
      241 kwrelgdqrl rdrllgavrr naerfkpqgi analwalatt gmrrrelenq glsvrlfeai
      301 rrnaerfnpq gianalcala tmgmwweele eqrlsdrllg avhrnaqrfs pqgianvlwa
      361 lttmgmrwge leaqrlnncl laavrynaer fssqqiantl walammalsw gylkeqrvdr
      421 lllnaidqsa nqfsleestq imwstrwfdi rpppeillki sni
//
LOCUS       WP_258006029             150 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Coxiella burnetii].
ACCESSION   WP_258006029
VERSION     WP_258006029.1
KEYWORDS    RefSeq.
SOURCE      Coxiella burnetii
  ORGANISM  Coxiella burnetii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Coxiellaceae; Coxiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024571.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13173.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Coxiella burnetii"
                     /db_xref="taxon:777"
     Protein         1..150
                     /product="AAA family ATPase"
                     /calculated_mol_wt=16947
     Region          1..>132
                     /region_name="COG1373"
                     /note="Predicted ATPase, AAA+ superfamily [General
                     function prediction only]"
                     /db_xref="CDD:440984"
ORIGIN      
        1 mrlvkrffta pkesfflfgp rgtgksiwlm tnfpqallid llqpdvvrry sayperleet
       61 vlgsqqkqii ideiqhvpel lnvvhrlieq krgwqfiltg ssarklrrtg vnllagraiv
      121 rhlhpfmaae lgsnfdltta lqsgllpvvt
//
LOCUS       WP_258006056              92 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Priestia megaterium].
ACCESSION   WP_258006056
VERSION     WP_258006056.1
KEYWORDS    RefSeq.
SOURCE      Priestia megaterium (Bacillus megaterium)
  ORGANISM  Priestia megaterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
REFERENCE   1  (residues 1 to 92)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 92)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 92)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 92)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Priestia megaterium"
                     /db_xref="taxon:1404"
     Protein         1..92
                     /product="ATP-binding protein"
                     /calculated_mol_wt=9942
     Region          <3..84
                     /region_name="KinB"
                     /note="Sporulation sensor histidine kinase B [Cell cycle
                     control, cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG5806"
                     /db_xref="CDD:444508"
ORIGIN      
        1 mskgtvkvtv ekrneygmvi iedegcgide qslarlgepf ystkqtgtgl glmisyriie
       61 qhqghisfas kvgvgtkvei alpyikepvn is
//
LOCUS       WP_258006150             503 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5693 family protein [Mesotoga sp. B105.6.4].
ACCESSION   WP_258006150
VERSION     WP_258006150.1
KEYWORDS    RefSeq.
SOURCE      Mesotoga sp. B105.6.4
  ORGANISM  Mesotoga sp. B105.6.4
            Bacteria; Thermotogati; Thermotogota; Thermotogae; Kosmotogales;
            Kosmotogaceae; Mesotoga.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039831.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18949.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Mesotoga sp. B105.6.4"
                     /db_xref="taxon:1582224"
     Protein         1..503
                     /product="DUF5693 family protein"
                     /calculated_mol_wt=56043
     Region          <155..481
                     /region_name="DUF5693"
                     /note="Family of unknown function (DUF5693); pfam18949"
                     /db_xref="CDD:465928"
ORIGIN      
        1 maevpvrprk sqrrrrnekq ksalrlgngi vvvafisgll lslfyipwrv sldfnyndav
       61 vitekavdav pskqliyved lenvsnless vilvdlrddw hrleeilalq ipmiltgvsp
      121 ytvselasil dnhfaytgym efderghyvl dvlrarenks lvfrvhnlkk keypnydvdk
      181 avtrylravr ersidallfl tpdndfdyde lvsqvygild gmglvstevv sprtgssrfa
      241 llaslfvfvl llsvspllaa vvtalfvlfp tvglpaaavf gefaiyrris slktgvikgl
      301 llffsfsifl giainasmvg asyqnglelf rgvkislval pfwlfvtgfg rsvskkvsrg
      361 dilvvllagl vavyyilrsg nfsfvldver tmrdyldnvl ivrprfkell aypllavmih
      421 fsfdlkgklg piiaaggslv tvsivntfch atvplwtgll rsayglifgt vlslliiaii
      481 kkynrsrdia nnllnesded ksn
//
LOCUS       WP_258006063             504 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent monooxygenase [Priestia megaterium].
ACCESSION   WP_258006063
VERSION     WP_258006063.1
KEYWORDS    RefSeq.
SOURCE      Priestia megaterium (Bacillus megaterium)
  ORGANISM  Priestia megaterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
REFERENCE   1  (residues 1 to 504)
  AUTHORS   Schreuder,H.A., van der Laan,J.M., Swarte,M.B., Kalk,K.H., Hol,W.G.
            and Drenth,J.
  TITLE     Crystal structure of the reduced form of p-hydroxybenzoate
            hydroxylase refined at 2.3 A resolution
  JOURNAL   Proteins 14 (2), 178-190 (1992)
   PUBMED   1409567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01494.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Priestia megaterium"
                     /db_xref="taxon:1404"
     Protein         1..504
                     /product="FAD-dependent monooxygenase"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /calculated_mol_wt=57522
     Region          5..492
                     /region_name="PRK06184"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:235728"
ORIGIN      
        1 mnpqilivga gptglvmayn larhnipfri idksdgpgqa sramailprt lefyqqfgfa
       61 devidrgikm edvyvrvknk ikakvhlgsl geglspfpfv ltfpqddher flleklknlg
      121 ievewktell slaehgegvk tllkaqqeet ayfkyicgcd gahstvrkqm niefkgekyk
      181 qhfyvmdvyg sgevmkdqki sisfsneefl icmpvrskgt yrmigiipsa fggqndvkae
      241 nihafiqrtf gtqveginwf styhihhrva srfqqgrifl sgdaahihsp aggqgmntgi
      301 gdainlswkl aavlqrkaal sildtyeeer lpfaellvnt tdrafkrmva rdktsqffrk
      361 hifppvlsfl frfpyprhka ftilsqirik yrnsdlssgq gtnvqsgdrl pyvernfesl
      421 qslnwqihvy gtaeeklkks mqekdfslhe fswnpylkka glqkdalyvi rpdgyigfis
      481 seqridllhq ylnthkilpf tney
//
LOCUS       WP_258006181             789 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing phosphohydrolase [Mesotoga sp. B105.6.4].
ACCESSION   WP_258006181
VERSION     WP_258006181.1
KEYWORDS    RefSeq.
SOURCE      Mesotoga sp. B105.6.4
  ORGANISM  Mesotoga sp. B105.6.4
            Bacteria; Thermotogati; Thermotogota; Thermotogae; Kosmotogales;
            Kosmotogaceae; Mesotoga.
REFERENCE   1  (residues 1 to 789)
  AUTHORS   Galperin,M.Y. and Chou,S.H.
  TITLE     Sequence Conservation, Domain Architectures, and Phylogenetic
            Distribution of the HD-GYP Type c-di-GMP Phosphodiesterases
  JOURNAL   J Bacteriol 204 (4), e0056121 (2022)
   PUBMED   34928179
REFERENCE   2  (residues 1 to 789)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024878.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13487.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Mesotoga sp. B105.6.4"
                     /db_xref="taxon:1582224"
     Protein         1..789
                     /product="HD domain-containing phosphohydrolase"
                     /calculated_mol_wt=88059
     Region          67..191
                     /region_name="PDC1_HK_sensor"
                     /note="first PDC (PhoQ/DcuS/CitA) domain of
                     methyl-accepting chemotaxis proteins, diguanylate-cyclase
                     and similar domains; cd18773"
                     /db_xref="CDD:350341"
     Region          234..783
                     /region_name="CHASE1"
                     /note="Extracytoplasmic sensor domain CHASE1 (specificity
                     unknown) [Signal transduction mechanisms]; COG3614"
                     /db_xref="CDD:442832"
     Region          <580..783
                     /region_name="HDGYP"
                     /note="HD-GYP domain, c-di-GMP phosphodiesterase class II
                     (or its inactivated variant) [Signal transduction
                     mechanisms]; COG2206"
                     /db_xref="CDD:441808"
ORIGIN      
        1 mrgpsfglsk rlvgfaakls glavvvisvv lillmgvlls faeiargrre fsdrllrqar
       61 fvhsglnlde lsrlsgsidd ldrpeywrlk sqleqvnalf pqyrfiylmg qkesgelfff
      121 idseppgsdd eslpgdiyad ateydfevfr ekkarvlpvi tdswgtwvsv ivpvidensg
      181 rllavlgidv eandfrkgil syaikpvvfs lvlilmails gffiirrdkl pqekkekrvq
      241 ryleaiafaa fgvavtimvs slvhdrqeaa rndafadlaa thvtslsram kniedfqvea
      301 larffesssf vyrqeflnyv gslsknneli swfwiervsp geiesfeesi rsegfpdffv
      361 wepgesggke rnldresyyp iqyieplesn rnllgldlgs lesvgeaiek aaasklmwas
      421 dpvvvptdee kalhffvfrp iveerpqgqt gfvgaifhsq afhsavpilp sngdptvilg
      481 lyqidsdgnp vllfssaqes glhvhesaet siwhypenen nialpvmlfg rlfvivahpg
      541 pdfsvvypmn ywifilaigl tvtlslavli gslgnrsfhl erevgkrtee lresletvsk
      601 tmeasvnvla svvdlrdpyt sghqrrvael svaigkklgf eenrltglrl samihdvgki
      661 qvpaeilntp rkltnlefdl iklhptagce lfkdiefpwp vadailqhhe rldgsgypeg
      721 isgdqiilea riiavadvve amashrpyrs slglqaalde irsgkgklyd arvvdaclel
      781 fdegfnfte
//
LOCUS       WP_258006263             340 aa            linear   BCT 02-MAR-2025
DEFINITION  SurA N-terminal domain-containing protein [Mesotoga sp. B105.6.4].
ACCESSION   WP_258006263
VERSION     WP_258006263.1
KEYWORDS    RefSeq.
SOURCE      Mesotoga sp. B105.6.4
  ORGANISM  Mesotoga sp. B105.6.4
            Bacteria; Thermotogati; Thermotogota; Thermotogae; Kosmotogales;
            Kosmotogaceae; Mesotoga.
REFERENCE   1  (residues 1 to 340)
  AUTHORS   Calabrese,A.N., Schiffrin,B., Watson,M., Karamanos,T.K., Walko,M.,
            Humes,J.R., Horne,J.E., White,P., Wilson,A.J., Kalli,A.C., Tuma,R.,
            Ashcroft,A.E., Brockwell,D.J. and Radford,S.E.
  TITLE     Inter-domain dynamics in the chaperone SurA and multi-site binding
            to its outer membrane protein clients
  JOURNAL   Nat Commun 11 (1), 2155 (2020)
   PUBMED   32358557
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 340)
  AUTHORS   Giuseppe,P.O., Von Atzingen,M., Nascimento,A.L., Zanchin,N.I. and
            Guimaraes,B.G.
  TITLE     The crystal structure of the leptospiral hypothetical protein
            LIC12922 reveals homology with the periplasmic chaperone SurA
  JOURNAL   J Struct Biol 173 (2), 312-322 (2011)
   PUBMED   20970503
REFERENCE   3  (residues 1 to 340)
  AUTHORS   Bitto,E. and McKay,D.B.
  TITLE     Crystallographic structure of SurA, a molecular chaperone that
            facilitates folding of outer membrane porins
  JOURNAL   Structure 10 (11), 1489-1498 (2002)
   PUBMED   12429090
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025010.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13624.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Mesotoga sp. B105.6.4"
                     /db_xref="taxon:1582224"
     Protein         1..340
                     /product="SurA N-terminal domain-containing protein"
                     /calculated_mol_wt=38436
     Region          2..309
                     /region_name="prsA"
                     /note="peptidylprolyl isomerase; Provisional; PRK00059"
                     /db_xref="CDD:234605"
ORIGIN      
        1 mkklliaali imlltvatfa qtedlsgsgi aarvngeiit mdaflskvlp nyteiskrie
       61 evdplfseml lnteagqkll eeyerhslea lieetlliqy areagiepns ealksvvnks
      121 imdtlaelei eksdadlfyi lrgyidglss yeakvvrdla yrevlnalye avtmnatvte
      181 eeieqyyman sskyaveeer anmkvllfds fseaysvwka asrdanpasv ldtfpevvtr
      241 sftrqeiesl npelvkslfk ptdgellssv vtldnryavi ylqsyspags qgvedvreei
      301 eknlieekkd llwrvwkeqe fkpfkesaiv eryyeadgge
//
LOCUS       WP_258006282             252 aa            linear   BCT 02-MAR-2025
DEFINITION  C13 family peptidase [Mesotoga sp. B105.6.4].
ACCESSION   WP_258006282
VERSION     WP_258006282.1
KEYWORDS    RefSeq.
SOURCE      Mesotoga sp. B105.6.4
  ORGANISM  Mesotoga sp. B105.6.4
            Bacteria; Thermotogati; Thermotogota; Thermotogae; Kosmotogales;
            Kosmotogaceae; Mesotoga.
REFERENCE   1  (residues 1 to 252)
  AUTHORS   Caffrey,C.R., McKerrow,J.H., Salter,J.P. and Sajid,M.
  TITLE     Blood 'n' guts: an update on schistosome digestive peptidases
  JOURNAL   Trends Parasitol 20 (5), 241-248 (2004)
   PUBMED   15105025
REFERENCE   2  (residues 1 to 252)
  AUTHORS   Caffrey,C.R., Mathieu,M.A., Gaffney,A.M., Salter,J.P., Sajid,M.,
            Lucas,K.D., Franklin,C., Bogyo,M. and McKerrow,J.H.
  TITLE     Identification of a cDNA encoding an active asparaginyl
            endopeptidase of Schistosoma mansoni and its expression in Pichia
            pastoris
  JOURNAL   FEBS Lett 466 (2-3), 244-248 (2000)
   PUBMED   10682836
REFERENCE   3  (residues 1 to 252)
  AUTHORS   Chen,J.M., Dando,P.M., Rawlings,N.D., Brown,M.A., Young,N.E.,
            Stevens,R.A., Hewitt,E., Watts,C. and Barrett,A.J.
  TITLE     Cloning, isolation, and characterization of mammalian legumain, an
            asparaginyl endopeptidase
  JOURNAL   J Biol Chem 272 (12), 8090-8098 (1997)
   PUBMED   9065484
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013788.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01650.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Mesotoga sp. B105.6.4"
                     /db_xref="taxon:1582224"
     Protein         1..252
                     /product="C13 family peptidase"
                     /GO_function="GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=27635
ORIGIN      
        1 merflrvkga vitsgitpsq nlyaeardvr nlmsdafkai mgsdrvrdvk yvegaaapnw
       61 tavqvamndl lttekvdyit lyfiahgntn lmnlggttfn asqlrsyile hpnvkfciii
      121 eschagswld glksggvtpa nieiiitttt aaksaypdwd saggssdhnp ddmyvewsgd
      181 flqklsyyts dahwpevtty atsksidqlp alfykcytsi kgaspsttsw tltersvags
      241 iqqpmiftkw ap
//
LOCUS       WP_258006433             456 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Arthrobacter sp. AFG20].
ACCESSION   WP_258006433
VERSION     WP_258006433.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. AFG20
  ORGANISM  Arthrobacter sp. AFG20
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Arthrobacter sp. AFG20"
                     /db_xref="taxon:1688671"
     Protein         1..456
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=46490
     Region          9..435
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(18..19,22..23,26,59,109..110,112..114,117,148,
                     151..152,155,234,237..238,241..243,246,273,277,353..354,
                     358,362,382,385..386,389..390,393)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mkshlpetri llgtqmvfnl gfyavipfla gamggdygld aaavglvlga rtfsqqgmfl
       61 fgglladrwg arrailtgcl vriagyatla aasdftlfll gavltgagga lfspalesql
      121 shadrahada trerapgkgr rsvfvwlait gemgalvgpl lgaallgwgf daalaagiai
      181 fvavtvllwf rlpagspgkp etagagepea spgqsrsalg clknrrfvaf cllastnmva
      241 ynqlyfafpl eldrrgldas wlamlfllas vltlllqlpv aaagqrlgpg ramsagfllv
      301 aaalaaaalt svpaeaggsv aggsgvggsv ptgsaeagav almagivgtl ilghmlltpt
      361 ilsliprfip legaasgrga yyglsatcgg iavlagnall gwlldltern hwwpgtpwlp
      421 mvglavlaal mlprllhgih rtstlgtatd aapmpn
//
LOCUS       WP_258006436             115 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Arthrobacter sp. AFG20].
ACCESSION   WP_258006436
VERSION     WP_258006436.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. AFG20
  ORGANISM  Arthrobacter sp. AFG20
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012312.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00083.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Arthrobacter sp. AFG20"
                     /db_xref="taxon:1688671"
     Protein         1..115
                     /product="MFS transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=12393
     Region          <23..>112
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mlgvlqvgfe aaddapaakk kmdlrvllrr pylkrtivcs sfyalqvgpl laiftfgpti
       61 lsafgmgegn lsnlgsviid lvflagcipa lklikswgrr pliiwcfalm aiple
//
LOCUS       WP_258006447             210 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Arthrobacter sp. AFG20].
ACCESSION   WP_258006447
VERSION     WP_258006447.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. AFG20
  ORGANISM  Arthrobacter sp. AFG20
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 210)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 210)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Arthrobacter sp. AFG20"
                     /db_xref="taxon:1688671"
     Protein         1..210
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=23319
     Region          11..198
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(78,80,82..83,145..146,166,197)
                     /site_type="active"
                     /db_xref="CDD:293792"
     Site            order(78,80,82,145,166,197)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:293792"
ORIGIN      
        1 mnstaaipvt avrvaelrpe gepmpvyvhi idhpdarvlv dtgmtqlhpa vadmdprlyp
       61 lkeqdfdiqs vdivvnthlh fdhcggnhlf sgkpiyvqrq elddarnqnd ytipewvdpp
      121 gmhyvpvdge lellpglrll sapghtrgsq vvvidgdegp tiiagdtavw fdeldnprte
      181 gqllvrslnp aivwlthehk pwmpetkasr
//
LOCUS       WP_258006507              38 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Arthrobacter sp.
            AFG20].
ACCESSION   WP_258006507
VERSION     WP_258006507.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. AFG20
  ORGANISM  Arthrobacter sp. AFG20
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 38)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 38)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..38
                     /organism="Arthrobacter sp. AFG20"
                     /db_xref="taxon:1688671"
     Protein         1..38
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=3655
     Region          1..>37
                     /region_name="PRK06182"
                     /note="short chain dehydrogenase; Validated"
                     /db_xref="CDD:180448"
ORIGIN      
        1 msqpvaivtg astgigfesa kllsasgftv yagarqvl
//
LOCUS       WP_258006508             144 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Arthrobacter sp.
            AFG20].
ACCESSION   WP_258006508
VERSION     WP_258006508.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. AFG20
  ORGANISM  Arthrobacter sp. AFG20
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 144)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 144)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Arthrobacter sp. AFG20"
                     /db_xref="taxon:1688671"
     Protein         1..144
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=15093
     Region          <1..144
                     /region_name="PRK06182"
                     /note="short chain dehydrogenase; Validated"
                     /db_xref="CDD:180448"
ORIGIN      
        1 mrgkfyeplg twyhatkfav eglsdalrle lkphgisvsi iepastvtew griaaeglla
       61 ssaggpypaq aremaavlas tgrpttstqp dvvagavlqa ataarprtry pvgrgaaait
      121 alrrllpdra ydlavtavlk riar
//
LOCUS       WP_258006548             410 aa            linear   BCT 02-MAR-2025
DEFINITION  NifU family protein [Arthrobacter sp. AFG20].
ACCESSION   WP_258006548
VERSION     WP_258006548.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. AFG20
  ORGANISM  Arthrobacter sp. AFG20
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 410)
  AUTHORS   Ouzounis,C., Bork,P. and Sander,C.
  TITLE     The modular structure of NifU proteins
  JOURNAL   Trends Biochem Sci 19 (5), 199-200 (1994)
   PUBMED   8048161
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013286.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01106.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Arthrobacter sp. AFG20"
                     /db_xref="taxon:1688671"
     Protein         1..410
                     /product="NifU family protein"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /GO_process="GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /calculated_mol_wt=41171
     Region          <66..158
                     /region_name="NifU"
                     /note="Fe-S cluster biogenesis protein NfuA,
                     4Fe-4S-binding domain [Posttranslational modification,
                     protein turnover, chaperones]; COG0694"
                     /db_xref="CDD:440458"
     Region          201..>287
                     /region_name="NirD"
                     /note="Ferredoxin subunit of nitrite reductase or a
                     ring-hydroxylating dioxygenase [Inorganic ion transport
                     and metabolism, Secondary metabolites biosynthesis,
                     transport and catabolism]; COG2146"
                     /db_xref="CDD:441749"
ORIGIN      
        1 mlggdrpalq sgdqigtlld algaggavar graedlvrqv tdlygaglqr imeilqahgk
       61 lddvtlealt adslvaallv ihglhphple arvaaaldsv rpylgshggd velegispdg
      121 vvrlkllgtc qgcpsssvtl kyaveeaiqn aapevtaidv veaekqpgap alipvdsllv
      181 rvnnpaggtp aeswhdmsgg twepvpeiag leagevagfl vggypvlacr tgqdiyayrd
      241 ycprctgsma gavlqralaa pvggglltcp tcrghfdvrg agvcledkel hleplpllvr
      301 ngvmsvavpt lsaqsaplpv apvpaapaav tpvqaiplvt paglepvpaa pgpepaepap
      361 vpaavsvsaa vsvpaavsvq sapavgasvp tptpapgmap elqaaggqdr
//
LOCUS       WP_258006519             566 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Arthrobacter sp. AFG20].
ACCESSION   WP_258006519
VERSION     WP_258006519.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. AFG20
  ORGANISM  Arthrobacter sp. AFG20
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 566)
  AUTHORS   Todone,F., Vanoni,M.A., Mozzarelli,A., Bolognesi,M., Coda,A.,
            Curti,B. and Mattevi,A.
  TITLE     Active site plasticity in D-amino acid oxidase: a crystallographic
            analysis
  JOURNAL   Biochemistry 36 (19), 5853-5860 (1997)
   PUBMED   9153426
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013434.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01266.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Arthrobacter sp. AFG20"
                     /db_xref="taxon:1688671"
     Protein         1..566
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=60214
     Region          6..546
                     /region_name="PRK12844"
                     /note="3-ketosteroid-delta-1-dehydrogenase; Reviewed"
                     /db_xref="CDD:183787"
ORIGIN      
        1 mkfvngtsad tydvvvvgsg agaltaaata aragksvvvl eksdllggts avsggmlwva
       61 dnhharkagi tdskaaaaqy vravargrgr eelldaalny gdqmlrfvee qcgvrfifld
      121 nfpdyrqdlp gavtggrtve pelfnsteal gglrkhvrsd grapftmqey eewgaftkfp
      181 wddlarrqdd glvakgqalv smllaslvrd natlatwarg hrllsdagrv tgveletger
      241 fhardgvvla tggfewdkal adsmlasrly tmcsppsntg dglrmsqrig gqtrgtreaw
      301 wapmsvtgdt rdgqpvgtll rferqgpgsi mvnrhgcrfa nesqnyndla rslqswdsaa
      361 nralntpahv ivdhgylery gilahragqp tpdylveapt ladlaakinv paenleatva
      421 rfngfaarge dpdfgrgesa ydkywgdadc pwpnpslgpl eagpfyalev vngafgtngg
      481 vatdgsarvl dvdnrpipgl faagnttena yaagypgaga tlgpimtmgy lagrnlagqs
      541 peyrspedst dqdgsadqpa tqlvga
//
LOCUS       WP_258006273             386 aa            linear   BCT 02-MAR-2025
DEFINITION  MEDS domain-containing protein [Mesotoga sp. B105.6.4].
ACCESSION   WP_258006273
VERSION     WP_258006273.1
KEYWORDS    RefSeq.
SOURCE      Mesotoga sp. B105.6.4
  ORGANISM  Mesotoga sp. B105.6.4
            Bacteria; Thermotogati; Thermotogota; Thermotogae; Kosmotogales;
            Kosmotogaceae; Mesotoga.
REFERENCE   1  (residues 1 to 386)
  AUTHORS   Anantharaman,V. and Aravind,L.
  TITLE     MEDS and PocR are novel domains with a predicted role in sensing
            simple hydrocarbon derivatives in prokaryotic signal transduction
            systems
  JOURNAL   Bioinformatics 21 (12), 2805-2811 (2005)
   PUBMED   15814558
REFERENCE   2  (residues 1 to 386)
  AUTHORS   La Roche,S.D. and Leisinger,T.
  TITLE     Identification of dcmR, the regulatory gene governing expression of
            dichloromethane dehalogenase in Methylobacterium sp. strain DM4
  JOURNAL   J Bacteriol 173 (21), 6714-6721 (1991)
   PUBMED   1938878
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025774.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14417.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Mesotoga sp. B105.6.4"
                     /db_xref="taxon:1582224"
     Protein         1..386
                     /product="MEDS domain-containing protein"
                     /calculated_mol_wt=42970
     Region          6..161
                     /region_name="MEDS"
                     /note="MEthanogen/methylotroph, DcmR Sensory domain;
                     pfam14417"
                     /db_xref="CDD:433946"
     Region          <192..375
                     /region_name="HDGYP"
                     /note="HD-GYP domain, c-di-GMP phosphodiesterase class II
                     (or its inactivated variant) [Signal transduction
                     mechanisms]; COG2206"
                     /db_xref="CDD:441808"
ORIGIN      
        1 mhgitlyesn rdfesaigsf livglsnnyk llylmpekdv aslrsvtlsr kqtveglvhe
       61 kaieiidprr sylsngsfdp erqvkfledf alkaleegfn glcvagegta lldsaiplck
      121 miryeaavnd lieklpiian clynpsrmdq ksvleisrlh pyvhrtgefs vnedyyslsr
      181 rsvefgeasr ldicrgtads llrmfriksi yvenheknvs dlaiaiadem sldsftkacl
      241 emagkihdig mtslfldmis rpgplhsfek vllrehpntg feiskgapfp eevsnailhh
      301 heridgsgyp nglrgseisl egsiiavsev vaamsfyrpy rekygteyal seiitncgsl
      361 yrtevaeacs nvfskgfafd gdssrv
//
LOCUS       WP_258006594             657 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Arthrobacter sp. AFG20].
ACCESSION   WP_258006594
VERSION     WP_258006594.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. AFG20
  ORGANISM  Arthrobacter sp. AFG20
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Arthrobacter sp. AFG20"
                     /db_xref="taxon:1688671"
     Protein         1..657
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=69059
     Region          13..412
                     /region_name="MFS_Azr1_MDR_like"
                     /note="Saccharomyces cerevisiae Azole resistance protein 1
                     (Azr1p), and similar multidrug resistance (MDR)
                     transporters of the Major Facilitator Superfamily;
                     cd17502"
                     /db_xref="CDD:341045"
     Site            order(19..20,24..25,28,60,110..111,113..115,118,138,
                     141..142,145,273,276..277,280..282,285,313,317,370..371,
                     375,379,395,398..399,402..403,406)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:341045"
     Region          <586..>645
                     /region_name="tolA_full"
                     /note="TolA protein; TIGR02794"
                     /db_xref="CDD:274303"
ORIGIN      
        1 mthrqimeal tgllaaffta ilsstivana lptimselkg tqtdfawvit aallanaatt
       61 pvwgkladlf dkkvlvqlsi vifvagsvma glsqtiplll tarvvqgiam ggltalaqai
      121 igsmipprdr gkysgymgav mavgtaggpl lggfivdspl gwrwtffvcv plavvalill
      181 qitlkiqhvk rparidwlgs illttgvsll liwvsfagnp dyydwwswqs almvgggvml
      241 lallvvvesk veqpiiplki iserttalai wasvavgvam fgsstflgqy fqvargatpt
      301 eaglltlpmi agnligsvvs gqmisrtgkw kryliagsvl ligglglagt mdhstelwqs
      361 gvftailglg lgmlmqnlvl avqntvsasd igtasasvaf frsvggaigv svlgaimsnr
      421 vkelaiqgla dagikagsgs sgasldladm pgpirdimra aygdataeif liagaiavva
      481 liavllikeq plrrtvdirp qaaadaesda elgsgrpaae ysdddleref aevltrqlag
      541 dakspsypgr qpaaepvlpm neppvrartm laemhnkpad lvpliqetqg llaeqqlqla
      601 aalnavarqa eqqriiaeeq aragaelkal srrlakerkl qsaaahyias hgkhrge
//
LOCUS       WP_258006597             831 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-L-arabinofuranosidase C-terminal domain-containing protein
            [Arthrobacter sp. AFG20].
ACCESSION   WP_258006597
VERSION     WP_258006597.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. AFG20
  ORGANISM  Arthrobacter sp. AFG20
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 831)
  AUTHORS   Gilead,S. and Shoham,Y.
  TITLE     Purification and characterization of alpha-L-arabinofuranosidase
            from Bacillus stearothermophilus T-6
  JOURNAL   Appl Environ Microbiol 61 (1), 170-174 (1995)
   PUBMED   7887599
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018647.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06964.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Arthrobacter sp. AFG20"
                     /db_xref="taxon:1688671"
     Protein         1..831
                     /product="alpha-L-arabinofuranosidase C-terminal
                     domain-containing protein"
                     /GO_function="GO:0046556 - alpha-L-arabinofuranosidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0046373 - L-arabinose metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=89626
     Region          234..>450
                     /region_name="AbfA"
                     /note="Alpha-L-arabinofuranosidase [Carbohydrate transport
                     and metabolism]; COG3534"
                     /db_xref="CDD:442755"
     Region          487..>586
                     /region_name="Alpha-L-AF_C"
                     /note="Alpha-L-arabinofuranosidase C-terminal domain;
                     pfam06964"
                     /db_xref="CDD:462053"
ORIGIN      
        1 mvlagsltaa llsmtpalga naesaqnrti sidaagsgps idstmygafy edinqgadgg
       61 iyaelvqnrs fefnsgdnrt ytpmtawetl krgsdgtiav vndnnrlnen nrnylqinat
      121 sagagsgagv gvrnsgwnag qkleahkkyn ysvwartsnp agstlavtle tpegtrldia
      181 tvkvkgdswa kyevtlspks stgagrlatl vqgtgtvrld mvslfpkdtw ngrenglrkd
      241 laekindlhp gflrfpggci vntgsydtys apnytrarty qwkdtigpve qrpanrnfwg
      301 ynqtyglgym eyfqwaedmg aapvpvvpvg vtgcgdtnqa pdqatldryi qdtldliefa
      361 ngdastewga kriayghpap ykldrislgn eeykpafkqy ftqfynavrk ahpeikiign
      421 tgpssqgpef edlanfnatt gvdlvdehyy ntpswflnnn hrydsydrns ykvflgeyas
      481 qgnkpanala easymtgler nadvvkmasy aplianeant qwspdmmffn gtsvrttpny
      541 evqklfmnnv gnqvvpstqd npastvvpis gkiglstwat saryddvkvt gadganlfsd
      601 dfsgtaaawt gndtgswsiq dgayvqsstt aqntmvtagn adwsnytlst katklagseg
      661 flvsfgvkdt gnyfwwnlgg wnntksvvek avnggktnvi ekntviqtgh eydirievsg
      721 rtaklyldnv lwgtvddtqa dpvysvvtkd aksgdtivkv vntkaektpv dikvagassl
      781 sstaavttlt qtadgqnlap asstfngaga aftyefepss vtfirlaaag k
//
LOCUS       WP_258006598             430 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Arthrobacter sp. AFG20].
ACCESSION   WP_258006598
VERSION     WP_258006598.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. AFG20
  ORGANISM  Arthrobacter sp. AFG20
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 430)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 430)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 430)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 430)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Arthrobacter sp. AFG20"
                     /db_xref="taxon:1688671"
     Protein         1..430
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=45317
     Region          41..421
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 maisaaalsv slvacgssgp agstaagdgs asmwgltggn qpvlqksvea wnsahsdqsi
       61 kldffanday ktkvrtavga gegptfiygw gggvlksyvd agqvedlssf vkenpevker
      121 ylpsvlknge idgktyalpn nnvqpvvlyy nkevfdkvgv qppktwdelm alvpkfkeag
      181 vapfslggqs kwpdlmwley lveriggpev faniaadkpn awsdpavtea ltkiqqlvda
      241 ggfvngfssi aadsnadqal lytgkaamvl qggwiyqgmk kdagsfvtgg klgfttfptv
      301 eggkgdpanv vgnpsnfwsi sakatdeqkk aalnyvkdgm ftdadtdali asgavpvvng
      361 idskleaspd kdfltfvygv akkapsftls wdqalspaqg damlsnldqi flkkitpeqf
      421 vttmnatigk
//
LOCUS       WP_258006621            1051 aa            linear   BCT 02-MAR-2025
DEFINITION  efflux RND transporter permease subunit [Arthrobacter sp. AFG20].
ACCESSION   WP_258006621
VERSION     WP_258006621.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. AFG20
  ORGANISM  Arthrobacter sp. AFG20
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 1051)
  AUTHORS   Murakami,S., Nakashima,R., Yamashita,E. and Yamaguchi,A.
  TITLE     Crystal structure of bacterial multidrug efflux transporter AcrB
  JOURNAL   Nature 419 (6907), 587-593 (2002)
   PUBMED   12374972
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00873.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Arthrobacter sp. AFG20"
                     /db_xref="taxon:1688671"
     Protein         1..1051
                     /product="efflux RND transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=110838
     Region          1..1038
                     /region_name="CusA"
                     /note="Cu/Ag efflux pump CusA [Inorganic ion transport and
                     metabolism]; COG3696"
                     /db_xref="CDD:442911"
ORIGIN      
        1 mmgailgwvl qfrilvlvva agvlgygfta lptmpvdafp efappqveiq tealglsage
       61 veqlitspme adllngvawv eairskslpg lssiqlvfqp gtdmfrarql vaerltqara
      121 lpnvsaapvl mqplsstsrv mmvrltskdm spidmsvlar wtmkpallav pgvanisiwg
      181 qrdqqlqvlv dpkqleakgv tldqvirttg nsvwvsplsy leastpgtgg fletghqrlg
      241 vqhvlpittp edlgkvsiqg stdklllgdv aqvqtdhqpl igdaqpgqda elllviekfp
      301 etntadvtkg ldetmrelqa glpgvtadtt vyrqesyveq emgtlgvall vtlllvaaaf
      361 gvifrswrsa litlitvpls liaaallltl rgaglntlvf agmilaltvi igdvaedlns
      421 aarayraska tglgdsrial lagalrpvrt slfyallima lsvlpmlfvp gqngamfgpl
      481 viayllalav amvvaltvta altfflppas aapgrerqam qrlrirygra lsrrpgkpal
      541 vlaaaavmal aalalapqlv pnhpvvpvla dntlvvqwra apgtsdqemv ritdtaarev
      601 ravqgvsnva tevgraitsd hvgdissgel wvgvakdasy sstledvqrv vagypglsat
      661 vstypqqkid qireaadsgf gvrvygvdma tlrakaeevr qvlahtagvv nprvdaaieq
      721 ptvqvkvdla kaqkagvipg dvrraaaall qgievgnvye qqkvfsvvvk gtpatrnslt
      781 svsellidtp kgghvrlgdv aevsivpnda vivhddtsrr vdvkadiqgr gladvqqdie
      841 rglqqiqfpv ayhaeiltrf aqqqsafqwl wllaavaafg ilvllqtalg gwrlaaavfl
      901 gliaslsggv iaaladggan ylaafvafsa ilgiavrscl llagevrnlr arhgeatgpa
      961 lviraarnrl kptlasvvtt aaallplvll ggvtgteviq piaiiiwggl ltttlfvlfv
     1021 lpaillrfeg sqagtrtatt qpavadartg l
//
LOCUS       WP_258006634             436 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase 87 family protein [Arthrobacter sp. AFG20].
ACCESSION   WP_258006634
VERSION     WP_258006634.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. AFG20
  ORGANISM  Arthrobacter sp. AFG20
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 436)
  AUTHORS   Birch,H.L., Alderwick,L.J., Bhatt,A., Rittmann,D., Krumbach,K.,
            Singh,A., Bai,Y., Lowary,T.L., Eggeling,L. and Besra,G.S.
  TITLE     Biosynthesis of mycobacterial arabinogalactan: identification of a
            novel alpha(1-->3) arabinofuranosyltransferase
  JOURNAL   Mol Microbiol 69 (5), 1191-1206 (2008)
   PUBMED   18627460
REFERENCE   2  (residues 1 to 436)
  AUTHORS   Morita,Y.S., Sena,C.B., Waller,R.F., Kurokawa,K., Sernee,M.F.,
            Nakatani,F., Haites,R.E., Billman-Jacobe,H., McConville,M.J.,
            Maeda,Y. and Kinoshita,T.
  TITLE     PimE is a polyprenol-phosphate-mannose-dependent
            mannosyltransferase that transfers the fifth mannose of
            phosphatidylinositol mannoside in mycobacteria
  JOURNAL   J Biol Chem 281 (35), 25143-25155 (2006)
   PUBMED   16803893
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021134.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09594.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Arthrobacter sp. AFG20"
                     /db_xref="taxon:1688671"
     Protein         1..436
                     /product="glycosyltransferase 87 family protein"
                     /GO_function="GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=47025
     Region          47..379
                     /region_name="PMT_2"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; cl21590"
                     /db_xref="CDD:473917"
ORIGIN      
        1 mdqttelqlr rrrpalaave lvvllavlsa avfvasrlda wgekgldfsv ywyggkilnd
       61 aglapsglyq ptvnwaggpe lpftyppfaa llfsllaklp qatalllfna agvavavwva
      121 algvrywnsk pswrstfasl tfrsalnrlg avvlflavln lgpwretlaf gqinilllgl
      181 mtadllarsp rwrnglpgsg flvgvaagik ltplvfglyf vvrkdwrgll nmcagfaftv
      241 llgwllrpae slsfwleilp dtsriggagy vdnlslkgal lhfgvpadav nvpwlvlsll
      301 vvglgaalir vassqgarvv aisataltml lispvswshh wvwmaavlpa fawtlretaq
      361 ryrlqrrvmg avlgvstfvf lfspktigta lgaenlnlqt pvlwimassa gvfcalaimv
      421 cwlvvlrrda vvelae
//
LOCUS       WP_258006695             323 aa            linear   BCT 02-MAR-2025
DEFINITION  iron chelate uptake ABC transporter family permease subunit [Vibrio
            diazotrophicus].
ACCESSION   WP_258006695
VERSION     WP_258006695.1
KEYWORDS    RefSeq.
SOURCE      Vibrio diazotrophicus
  ORGANISM  Vibrio diazotrophicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 323)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013219.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01032.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Vibrio diazotrophicus"
                     /db_xref="taxon:685"
     Protein         1..323
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /calculated_mol_wt=33175
     Region          7..322
                     /region_name="TM_PBP1_branched-chain-AA_like"
                     /note="Transmembrane subunit (TM) of Periplasmic Binding
                     Protein (PBP)-dependent ATP-Binding Cassette (ABC)
                     transporters which are involved in the uptake of
                     branched-chain amino acids (AAs), as well as TMs of
                     transporters involved in the uptake of...; cl00454"
                     /db_xref="CDD:444914"
     Site            order(75,79..81,203..204,206..208,210..211,213..218,
                     220..222,263,270)
                     /site_type="active"
                     /note="ABC-ATPase subunit interface [active]"
                     /db_xref="CDD:119348"
     Site            order(80,82,87,142,144..145,148..149,152..153,156,
                     159..160,162,173..174,177,253,305,308..309,312,315..316,
                     319)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:119348"
     Site            order(162,187,245,249,293,302)
                     /site_type="active"
                     /note="putative PBP binding regions [active]"
                     /db_xref="CDD:119348"
ORIGIN      
        1 mnvvtalivs lllvtwlglf sysavpvsal daivgiwsps adviahvivq dirlprvlea
       61 alvgaslsca galmqgltrn plaspsvfgv nagaalgial attvfssnii sspiaamigg
      121 faawvlvmvl ggawkmgaer gqlvlagiai salcgaltka svilveeqaa svmvwlagsf
      181 ahvswdtwaw swpslfaali lslllapkvn llamgdervk slgvnlnllr aaialavlvl
      241 vgvsvssvga iafvglivph igrllvgydy rillpvsmll gavltigadi lsravvfpte
      301 tpagavlaii gapcflylvr qkq
//
LOCUS       WP_258006697             236 aa            linear   BCT 02-MAR-2025
DEFINITION  NifB/NifX family molybdenum-iron cluster-binding protein [Vibrio
            diazotrophicus].
ACCESSION   WP_258006697
VERSION     WP_258006697.1
KEYWORDS    RefSeq.
SOURCE      Vibrio diazotrophicus
  ORGANISM  Vibrio diazotrophicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 236)
  AUTHORS   Rubio,L.M., Rangaraj,P., Homer,M.J., Roberts,G.P. and Ludden,P.W.
  TITLE     Cloning and mutational analysis of the gamma gene from Azotobacter
            vinelandii defines a new family of proteins capable of
            metallocluster binding and protein stabilization
  JOURNAL   J Biol Chem 277 (16), 14299-14305 (2002)
   PUBMED   11823455
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014620.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02579.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Vibrio diazotrophicus"
                     /db_xref="taxon:685"
     Protein         1..236
                     /product="NifB/NifX family molybdenum-iron cluster-binding
                     protein"
                     /calculated_mol_wt=25580
     Region          7..>78
                     /region_name="DIMCO_N"
                     /note="Dinitrogenase iron-molybdenum cofactor, N-terminal;
                     pfam16844"
                     /db_xref="CDD:435604"
     Region          102..217
                     /region_name="NifX_NifB"
                     /note="This CD represents a family of iron-molybdenum
                     cluster-binding proteins that includes NifB, NifX, and
                     NifY, all of which are involved in the synthesis of an
                     iron-molybdenum cofactor (FeMo-co) that binds the active
                     site of the dinitrogenase enzyme. This...; cl00252"
                     /db_xref="CDD:469689"
ORIGIN      
        1 mmmdntisdq aairialask slpnielrsl lglliqhlge pltetklvgl spkafrlmvg
       61 slgsgptrkd vsnalhvlcn peisdvsape vasqtpisgp klrvaltsnq gemvnghygs
      121 clrvliyevn atqhqlvevr emptekkgee raiamldrir dchmlftlsi ggpaaarvtr
      181 anihpikkta paeasvvlke lsqviatnpp pwvkrilgfe ksaveyaqle leesye
//
LOCUS       WP_258006702             463 aa            linear   BCT 02-MAR-2025
DEFINITION  PTS transporter subunit EIIC [Vibrio diazotrophicus].
ACCESSION   WP_258006702
VERSION     WP_258006702.1
KEYWORDS    RefSeq.
SOURCE      Vibrio diazotrophicus
  ORGANISM  Vibrio diazotrophicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 463)
  AUTHORS   Reizer,J., Paulsen,I.T., Reizer,A., Titgemeyer,F. and Saier,M.H.
            Jr.
  TITLE     Novel phosphotransferase system genes revealed by bacterial genome
            analysis: the complete complement of pts genes in mycoplasma
            genitalium
  JOURNAL   Microb Comp Genomics 1 (3), 151-164 (1996)
   PUBMED   9689210
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02378.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Vibrio diazotrophicus"
                     /db_xref="taxon:685"
     Protein         1..463
                     /product="PTS transporter subunit EIIC"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /calculated_mol_wt=49115
     Region          20..>459
                     /region_name="PTS-II-ABC-beta"
                     /note="PTS system, beta-glucoside-specific IIABC
                     component; TIGR01995"
                     /db_xref="CDD:273919"
ORIGIN      
        1 maptksvhnh semsehlqll ikalggqeni vnithcmtrl rfklvkdela nkselekikg
       61 vkgvvlsqgq tqvvigvdve kwynelsgis qvdevseien rklfqnamrv vagifgpvvp
      121 aiagagmlmg llsgliatnv isessdtvff frsisvavff flpmlvsfss akvfkvneyl
      181 alavasamla pklidkaaml kaagsspeln vfgivpielm gyggaivpai lavwvlskit
      241 plvdrlvpss akpvitplla favtstvvls fvapagmwls ngagwvvssl leisptltgf
      301 vfgltrpiti vfgihhsmtp islnnfalyg kdllmpimcl gnmaiagatv avwykqrkhp
      361 skeqssitis sgitailgit epalfgvltk ytkallaasi aagvfgaisa tidthlttyi
      421 lssifsvpay lagglqnfiq aifgivgvfv lsfiltsivv kte
//
LOCUS       WP_258006479             675 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6807 family protein [Arthrobacter sp. AFG20].
ACCESSION   WP_258006479
VERSION     WP_258006479.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. AFG20
  ORGANISM  Arthrobacter sp. AFG20
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 675)
  AUTHORS   Singh,B.K. and Tate,K.
  TITLE     Biochemical and molecular characterization of methanotrophs in soil
            from a pristine New Zealand beech forest
  JOURNAL   FEMS Microbiol Lett 275 (1), 89-97 (2007)
   PUBMED   17696992
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025465.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14100.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Arthrobacter sp. AFG20"
                     /db_xref="taxon:1688671"
     Protein         1..675
                     /product="DUF6807 family protein"
                     /calculated_mol_wt=70532
     Region          14..272
                     /region_name="MviM"
                     /note="Predicted dehydrogenase [General function
                     prediction only]; COG0673"
                     /db_xref="CDD:440437"
     Region          393..667
                     /region_name="DUF6807"
                     /note="Family of unknown function (DUF6807); pfam14100"
                     /db_xref="CDD:433715"
ORIGIN      
        1 maaapsavpt tvprialvgv hgygarhldn lrrlenrqla rlvavadprp padgtldssv
       61 qvfgtldell aagtapdvvi latpiqthap lalaaiaaga dvyvekppma slaqfeevla
      121 aaeaagrlvq vgfqslgsda lpeiaalves galgrirgig atgawvrnag yfkrsrwagr
      181 rsldgtdvvd gvatnalaha vatglriaga agvgdvgsve tdlyrahnte sddtsvirvr
      241 tpagrvlmca ltlcaaeqsp psvtvfgtlg kaeffytedr lvletaqgts trtfgrtdll
      301 enllaarata ngtgllspls aagaymtvle avrtaeppre ipaacvaweg esddahpvvg
      361 gietallrav lsqstfaelg lpwarpepak pflavdgrpv awlqdgsrit ptsvprpylh
      421 pvttlagtvv tdhlpadhvw hlgagvaiqd vagvnfwggr tytrraggyv wqddhghiei
      481 tdtaespggl hqtlhwvgpd gtavlteqrr wrydavgpsv wklgldfela pvgpepvalg
      541 spgsngreng gyggffwrlp pasdarirta raegedavhg tvapwlawsg vfgaagrsas
      601 gqeatlvfla spqapdpwfv rlagypgvgl slawdsplla trdnpvrrtv tvlvadgils
      661 tadiaqltes lgett
//
LOCUS       WP_258006703             495 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Vibrio diazotrophicus].
ACCESSION   WP_258006703
VERSION     WP_258006703.1
KEYWORDS    RefSeq.
SOURCE      Vibrio diazotrophicus
  ORGANISM  Vibrio diazotrophicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 495)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Vibrio diazotrophicus"
                     /db_xref="taxon:685"
     Protein         1..495
                     /product="AMP-binding protein"
                     /calculated_mol_wt=53559
     Region          26..473
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(147,150..155,157..158)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(150,276..277,297..302,362,374,377,389,468)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(150,191..192,237,239,276..277,297..302,362,374,377,
                     386..389,444)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(191,239,276,386..388,435,444)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
ORIGIN      
        1 miieslirhs idtpnkiafi gadeeisyqn llirvrdvae ylveyspkci alraensldw
       61 viadlaalya eipnvpvplf ftpeqvdhil aesgadllvg dwdawventd dnahsldaim
      121 vghaenlsiw krsvkdvkpl lshtgkitft sgstghpkgv clsqnqlskv sraladtiat
      181 evkcekhlvl lplstlleni tgiyvpiiig atsvvlngee vglsgssnfn psqfalalak
      241 ylpnslvltp allkalievv kampvlaknl efvavggarv spqllemahs lgipafegyg
      301 lsenasvvsl ntpsaykagt sgkplphidv kvsndgeiyv sgcvalgyig qpfeqgwyat
      361 gdlghldedg flvidgrkkn qiitafgrni spewveseaq afralygmvl vgdgekslsa
      421 ilenpnveqv taalkqlnqr lpdyarirtl itaqglnsma gfytsngrpi rskfeqwmls
      481 ktdeddgrii tpine
//
LOCUS       WP_258006713             287 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF72 domain-containing protein [Vibrio diazotrophicus].
ACCESSION   WP_258006713
VERSION     WP_258006713.1
KEYWORDS    RefSeq.
SOURCE      Vibrio diazotrophicus
  ORGANISM  Vibrio diazotrophicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014017.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01904.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Vibrio diazotrophicus"
                     /db_xref="taxon:685"
     Protein         1..287
                     /product="DUF72 domain-containing protein"
                     /calculated_mol_wt=32855
     Region          4..279
                     /region_name="DUF72"
                     /note="Protein of unknown function DUF72; cl00777"
                     /db_xref="CDD:469916"
ORIGIN      
        1 meyplrlglt mwshpfwqqh fygsgtqasq rlekyaqvfh tvegnttfya spspatvnnw
       61 kaatpesfrf tfklpksith qnmlngcqde lkafmslmep lhnkvgmwti qlpaafgpth
      121 leqlkkfrry fpaqfplgve vrhpsffakg eaekalnqwl neenidriim dsrplfsaer
      181 tseaiidaqq kkprvpvhai stgnkpmirf ighpemdanm pffepwiqkl ptwiaegkqp
      241 yvmihtpdnn yapelalaiy qrlqsvitlp dlaafpaqsd tnqlsmf
//
LOCUS       WP_258006730             220 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Vibrio diazotrophicus].
ACCESSION   WP_258006730
VERSION     WP_258006730.1
KEYWORDS    RefSeq.
SOURCE      Vibrio diazotrophicus
  ORGANISM  Vibrio diazotrophicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 220)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 220)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Vibrio diazotrophicus"
                     /db_xref="taxon:685"
     Protein         1..220
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=24961
     Region          33..220
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
     Site            order(158..160,170..171)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
ORIGIN      
        1 mnfelrqwds yffsrhigdv nwssssnecl pldlittkvs srdedkigll nqagfvfceg
       61 ealfvkqlln vkhlieverl gkddlpavqn ltdglylssr fkspwfteee kdsfyrewfk
      121 kavlgqfddl cmikrvdgni agfvtvrvdn ddasigligv laeyqalglg ralihcaesy
      181 avekgcknls vatqlsnlka mnlymksgyf lqqtaywfyk
//
LOCUS       WP_258006737             371 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase [Vibrio diazotrophicus].
ACCESSION   WP_258006737
VERSION     WP_258006737.1
KEYWORDS    RefSeq.
SOURCE      Vibrio diazotrophicus
  ORGANISM  Vibrio diazotrophicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 371)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Vibrio diazotrophicus"
                     /db_xref="taxon:685"
     Protein         1..371
                     /product="PfkB family carbohydrate kinase"
                     /calculated_mol_wt=40345
     Region          11..367
                     /region_name="PRK09954"
                     /note="sugar kinase"
                     /db_xref="CDD:182165"
ORIGIN      
        1 minghmfvtp reqqilailr enpmiqqqel adqlmisrsa iaghimnltn kglikgkgyi
       61 lasqktaivi gganmdlcgk asvpllngds npgtlhyspg gvarniadnl arlgskveli
      121 ssigndqwge qlvsacidag vgvshllrcq qgrtatylsi hdnegemqia lndmkvleql
      181 naeqltkhks lishsdlvvi danlsedals ylfncidntr iyvdpvsank alklkpylaq
      241 idllkpnlie aellsgikvt seddypricd alhhlgvkev vlslgskgif asnqkesfrl
      301 kprttsvtnv tgagdalmag lahatlemws wnksiefafs caelatqsyd tinprmsdra
      361 vqrlmemnha e
//
LOCUS       WP_258006803             432 aa            linear   BCT 02-MAR-2025
DEFINITION  outer membrane beta-barrel protein [Vibrio diazotrophicus].
ACCESSION   WP_258006803
VERSION     WP_258006803.1
KEYWORDS    RefSeq.
SOURCE      Vibrio diazotrophicus
  ORGANISM  Vibrio diazotrophicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10082.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Vibrio diazotrophicus"
                     /db_xref="taxon:685"
     Protein         1..432
                     /product="outer membrane beta-barrel protein"
                     /calculated_mol_wt=50571
     Region          30..431
                     /region_name="COG5338"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:444122"
ORIGIN      
        1 mkrhtsfllc mgtllvnvsa hadlkpkshi giagidfqsq vgtaygiddn vtfqiddedk
       61 iesnyltvsp elkaigqrge dqyllmykgd ynryqdshed dsdshfmmfd gywryglrhg
      121 lkwnvqqgyg kekrglglte gfdesqmeqy gfgdsgldys qfntslrysy gapkgrgkld
      181 vmlqtksfgy ddkdhiqiad ndfyqyaleq ewqettglie lfdqysddsr fryslitnrr
      241 hyqankrkds neyyllfgik svrsgkttid adiaalykaf pendrsesfl ganwnvalew
      301 kplkhdtwsl htsqrvkdpr qeggyildgi ygiswqhfww vdrfsttisy eyetedyrie
      361 nnnrydktkt akfaigydfr psiriemnyq wkkfssnedi dvlnigefdq ysiirrlgyd
      421 qsyvelqlkv qi
//
LOCUS       WP_258006868            2487 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-ketoacyl synthase N-terminal-like domain-containing protein
            [Burkholderia humptydooensis].
ACCESSION   WP_258006868
VERSION     WP_258006868.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia humptydooensis
  ORGANISM  Burkholderia humptydooensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 2487)
  AUTHORS   Huang,W., Jia,J., Edwards,P., Dehesh,K., Schneider,G. and
            Lindqvist,Y.
  TITLE     Crystal structure of beta-ketoacyl-acyl carrier protein synthase II
            from E.coli reveals the molecular architecture of condensing
            enzymes
  JOURNAL   EMBO J 17 (5), 1183-1191 (1998)
   PUBMED   9482715
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012337.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00109.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2487
                     /organism="Burkholderia humptydooensis"
                     /db_xref="taxon:430531"
     Protein         1..2487
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /calculated_mol_wt=262759
     Region          2..>372
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          <394..952
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          759..1008
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     Site            order(784,786,818,822..826,862,864..866,888..889,892)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(824,866)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(846,854,875..878,890..893,899,901..903,905..906,
                     911..912,914..915,917..918,921,934,950,953..954)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
     Region          1018..1095
                     /region_name="PKS_PP"
                     /note="Phosphopantetheine attachment site; smart00823"
                     /db_xref="CDD:214834"
     Region          1127..1209
                     /region_name="PKS_PP"
                     /note="Phosphopantetheine attachment site; smart00823"
                     /db_xref="CDD:214834"
     Region          <1198..>1284
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          1288..>1803
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          1913..2309
                     /region_name="CzcO"
                     /note="Predicted flavoprotein CzcO associated with the
                     cation diffusion facilitator CzcD [Inorganic ion transport
                     and metabolism]; COG2072"
                     /db_xref="CDD:441675"
ORIGIN      
        1 msycldltgp slaidtmcss slvaiheace rlrrgdcdia iaggvnlylh panyvalcsg
       61 hmlspegrcr sfgagadgfv pgegvgavil kplalarrdg daihaviras ginhsgkthg
      121 ymvpspasqq alirltlara gcdaasigyl eahgtgtalg dpiefrglvq afgergagvq
      181 calgsvksni ghleaaagia altkvvlqlr hrklvptlha aelnpeiald gsgfvmcdml
      241 rdwtpqpgpd aplragissf gaggvnahli veqyrdaead aaarngadeg aapavfvlsa
      301 rnadrldayl drmiafladg ggpltalcre lqtgrsamae rcavvcrstt ellevlrahr
      361 rgepvegfhc grivdvdvaa dadavapddl dacarawvrg adidwrvgqa ppcarparai
      421 avptypfkpq rfwldtlapa laldvaagda varaadaatg gphascagai rlpaprrfia
      481 pggmlsdari tlmspaeaar srsaahspqp dstarrapaa epliarrdda hpslrhvdlp
      541 agwsaadlva rltelfelfe rpvsgepvda vllhgprdgf hhalddvpdg alarlvaaig
      601 gappvvlaal pgdaiglgwl igaacdlliv dsgsrygcat ppsgaaeell sarfgarpga
      661 aamlsgavrt getwqaanlg lhavpaqamg gealaatqal vagggraasl lkahwrgvff
      721 seagalgaps swpvladrah epeladvaaa adsgrpvalp hscveltldd agvavarisd
      781 patrnaftpa lvaameavva wasetpgckv liltghghyf atggtreglq aiqqgtakft
      841 darlyelpla cpvpviaamq ghaigagwam gmacdavlfa eesvyhspyl sygftpgags
      901 tlvfpmrlgl dlgreillga rpykgrelre rlpglsvapr gevlararri aaqwsaqrtr
      961 nelirdkrqa laalaqampg airkelamhe qtfhhnpdva rridraygvg atpaadmpsa
     1021 pardlaallk stlaaeiqls agelddeagf vdlgldsvta vtwartlgra lsieltpahv
     1081 yqypsvakll aylreatdgv avrgdvggad avpaaapapg pkpqptlept paaaagiaiv
     1141 eivrqtlaae lqldaqdida hasfvdmgld svtavtwark lherlavdls ptqlyqhpnv
     1201 aalcahlsda gasagpdaaa haaadraart aasepasrpa lqpappsiaa qapalatvqa
     1261 ppavgstpep pptpadaprr aasaervdia iigmagrfpg aadldafwrn lvegrdsive
     1321 vpphrwsldr hydpdpqakg ktysrwigll ddadafdaef fgispreaeh mdpqqrvfme
     1381 ncwhaiehag ynpfslatqr tglfvgcatg dyadlgrrde agaqsfmgga ssilsarmpy
     1441 flnldgpcla idtacssalv avneacnsll lgncdlaiag gvcvmagptl hilsskagml
     1501 sptgrcrtfd gaadgfvpge gvgtvllrrl dealaagdti hgvirgwgin qdgrtngita
     1561 pnpdaqrrla sgvyrrfgid pkrimmaeah gtgtklgdpi evralteafr efdagtgyca
     1621 igsvksnigh lalaagiagl lkvvlslrhr tipptlhces vnehidlars pfhvprvaqa
     1681 wrtadgaprm acvssfgfsg tnahmvveqa paaappaiad aasreqlvvl sarrpeslra
     1741 aaarlrdalv aqdaavsapr lvdvaytlqi gratfrhrla ivasslagli erldgwlagg
     1801 vdpragiheg aapaaqaadr sariaralad gdphaaaalw vaggetggea rafdglsprr
     1861 ialpgyafvk srywiggapp vidpphsaas iaspaltast astastargl gkriavigag
     1921 paglvmaksl leeghrpdvf erqadlggvw llhtenkrag ayrktrfqts kytsafsdfd
     1981 gapvdghfhg vadmhrylrd yaecfgvter iryrtvvrrv ephgeqwcva terdgvahtg
     2041 iydgvalcqg lywkpwrpef agldtfrgti lhsaeyvder clngkrvliv gngisgmdia
     2101 eeaargasqv iwtmrrpkfi mprmtgfvpn dfqspaslla nvdpaqmmer vrysmpeyfr
     2161 qyqdsgllpd lddfrrqpvv qindgivslv asgrveavid eieafdahgc rfrrsgryve
     2221 idavvfctgy qiderldclp dvsmradfam gifhrerpsl vstscplpva ysgtfffpem
     2281 varwyarvms gradlagsel dyrldrrhaa ingpianvvf glrlgllpdp arefrefwrl
     2341 vnlppfppiy rlrgehadpn aaarlaalnr rnltsgsaga aldtvryrll aglgdaalre
     2401 llargeided dcrhagrhaa daitldwkrq yilrddgaap pggepaaera pspgspewdd
     2461 yrtllarlra geldmqgvlh alakqdd
//
LOCUS       WP_258006872             278 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Burkholderia humptydooensis].
ACCESSION   WP_258006872
VERSION     WP_258006872.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia humptydooensis
  ORGANISM  Burkholderia humptydooensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Burkholderia humptydooensis"
                     /db_xref="taxon:430531"
     Protein         1..>278
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          6..>278
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 merrtfkgcf sgwaldgvdt qmfslvipal laswsigkgq agliggatla agaiggllag
       61 miadrfgrvr alqitvcwfs lftflsafaq nfeqllalkt lqglgfggew tagavllset
      121 vrarhrgkam givqsawgfg wggavllytl vfswlppewa wrvlfaigvl pallvlyirr
      181 aipepprdda raaaaasara saksifdpav lrmtivggli gvgahggyha ittwlptylk
      241 terhlsvlgt gaylaviiva fivgcmtsay lqdrigrr
//
LOCUS       WP_258006875             379 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Burkholderia humptydooensis].
ACCESSION   WP_258006875
VERSION     WP_258006875.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia humptydooensis
  ORGANISM  Burkholderia humptydooensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Burkholderia humptydooensis"
                     /db_xref="taxon:430531"
     Protein         1..>379
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          10..379
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(20..21,24..25,28,66,124..125,127..129,132,152,
                     155..156,159,239,242..243,246..248,251,279,283,336..337,
                     341,345,361,364..365,368..369,372)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mkhaphmrgi vaavignale wydfvvfsym tvvladlffp tghsytsill ttgtfgvafl
       61 mrpigglvlg syadrfgrkr alslvialmt lglliislap thasigvaap vliviarliq
      121 gfsaggefgt atalliesap pgrsgffgsf qmasqaaall lgaivgalvt kglshdelma
      181 wgwripfvig lvigpvgfyi rrnlvepesa paaderptqv lqsvvrdhig gvlsslaavv
      241 altssvyvlv sylptyavkq lklpieasfy alvagntllv llcpvagris dsigrkslsl
      301 vslvvtlall yplfawlnas psvakillvq cllsvslagf ygpfgalvse qfpaevrstg
      361 lslaynlavm lfggfsqmi
//
LOCUS       WP_258006893             382 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein, partial [Burkholderia
            humptydooensis].
ACCESSION   WP_258006893
VERSION     WP_258006893.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia humptydooensis
  ORGANISM  Burkholderia humptydooensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 382)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 382)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 382)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Burkholderia humptydooensis"
                     /db_xref="taxon:430531"
     Protein         <1..382
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
     Region          <1..102
                     /region_name="CaiA"
                     /note="Acyl-CoA dehydrogenase related to the alkylation
                     response protein AidB [Lipid transport and metabolism];
                     COG1960"
                     /db_xref="CDD:441563"
     Region          290..364
                     /region_name="AcpP"
                     /note="Acyl carrier protein [Lipid transport and
                     metabolism]; COG0236"
                     /db_xref="CDD:440006"
ORIGIN      
        1 hplarqrlgd lrhridglsa lieqlaadfd agrdapedgl liakilgsec lsqtsdelmq
       61 mlggrgyiet nvapqifrda rlprifegpt etllahlgsr llnggddllg ylgertgaga
      121 laaelrglge qlleeglana ealggaahat nwvnywlgsv aqwalllaav eqaakrrgad
      181 gatldwaqsq yelaveaaqr qvgrrrvlss aaqlaewaqr dereigpieq tvpgatqrid
      241 pllradydtr aepagigaal avdepppaad vspepasasa gqadpglkre verwlltwlg
      301 erlrnrrial taettfadig ldsilavelt mafgdafrtt vdasavwdha sidalathla
      361 armgqhapaq adaassaiss sl
//
LOCUS       WP_258006897             227 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            humptydooensis].
ACCESSION   WP_258006897
VERSION     WP_258006897.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia humptydooensis
  ORGANISM  Burkholderia humptydooensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 227)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Burkholderia humptydooensis"
                     /db_xref="taxon:430531"
     Protein         1..>227
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          50..>227
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mtspdllsla arfarlpdtq rkqflaklgd agidfrmlpi ppredraasv pasfaqtrlw
       61 lharllgesa ayhiterlrl dgaldanalr lscdaliarh ealrttfaeg adgvlqtvha
      121 pmrcpwrftd lagasaaard araaavaerd eaepfdlang plvrahlirf daathwlvlt
      181 thhivsdgws advmlaelss fyrsytmgda vslaplpvqy adyalwq
//
LOCUS       WP_258006933            2088 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-ketoacyl synthase N-terminal-like domain-containing protein
            [Burkholderia humptydooensis].
ACCESSION   WP_258006933
VERSION     WP_258006933.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia humptydooensis
  ORGANISM  Burkholderia humptydooensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 2088)
  AUTHORS   Huang,W., Jia,J., Edwards,P., Dehesh,K., Schneider,G. and
            Lindqvist,Y.
  TITLE     Crystal structure of beta-ketoacyl-acyl carrier protein synthase II
            from E.coli reveals the molecular architecture of condensing
            enzymes
  JOURNAL   EMBO J 17 (5), 1183-1191 (1998)
   PUBMED   9482715
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012337.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00109.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2088
                     /organism="Burkholderia humptydooensis"
                     /db_xref="taxon:430531"
     Protein         1..2088
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /calculated_mol_wt=223437
     Region          24..575
                     /region_name="EntF2"
                     /note="Thioesterase domain of type I polyketide synthase
                     or non-ribosomal peptide synthetase [Secondary metabolites
                     biosynthesis, transport and catabolism]; COG3319"
                     /db_xref="CDD:442548"
     Region          <353..565
                     /region_name="entF"
                     /note="enterobactin non-ribosomal peptide synthetase EntF;
                     PRK10252"
                     /db_xref="CDD:236668"
     Region          793..2087
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          796..1199
                     /region_name="PKS"
                     /note="polyketide synthases (PKSs) polymerize simple fatty
                     acids into a large variety of different products, called
                     polyketides, by successive decarboxylating Claisen
                     condensations. PKSs can be divided into 2 groups, modular
                     type I PKSs consisting of one or...; cd00833"
                     /db_xref="CDD:238429"
     Site            order(948,1083,1122)
                     /site_type="active"
                     /db_xref="CDD:238429"
ORIGIN      
        1 mvverapaig appaaraavv aialsarsgd alrrmaaelh dhlaaypelr iedvartlhm
       61 greamtvrag clvesrrelm gwlrefasge ppapartaap qapasaaapl rarldealqa
      121 wlaardvdwp aaygdtwatm rvaplalpay pfdtrefwre tprarrager taagieaast
      181 padtaapppv alsapgcaap detvaevkda irallhvept eaiddatffe lgidsirmvs
      241 fvneiaarla lpleetvlfd cptvaqfcvh varlraasnr pdgraaasaa ppgtgvaapa
      301 tpralaaapa aradrasiaa ashdddgavl lqlkaavrai ldypdserfd dgatffelgv
      361 dsirmvgfva alsarlglel eetvlfdhpt laalaghvaa qrrsrvgvpg matavtvetp
      421 adavaapaag lqpppldhaa lldnlrrhgr tyeemvplqt egdgpllfcl hpasgdvamf
      481 gklaaavgtr crmvgikarg fltrqpacad ayemarhhae iiqavdpagp yhvmgasmgg
      541 vvayevarvl qnagrrvssv fmletplitc erdsdifald elqnwltnan flmiamlhld
      601 pafrqrkqdg lvkwddltit apelgldedg ardderlesr lvelivergv rqapqilstr
      661 lrsmsdthrn nlrcmreyrw qplarpdeve ilmfrtasar atsdqvynpn ylhrlqrvhg
      721 smiplldawv ermpqvrtvv vggedhfdlc nrtlgdeevi gpvlasmrrp paaqpaaaav
      781 aaggaataga asdalrvavi gisarfpgag dvdafwrvla egksligavp agrfpprdga
      841 pdhgclferi defdhaffhl spneaqmmep aermfleeaw ravedaglvp drlaganwgv
      901 fagsggdydl hvqsvlgvap qvsastlpgr vayhlnlhgp vmaidagcas sllavgqacd
      961 slrlgqceia iaggamvyst rnlietghyy rllseterga algadatgml pgeavgalvl
     1021 kplqdavrdg drvyavldaw gsahngrtqg iaapsaasqa alltsvyrrf gidpasldff
     1081 eanasgsplg dkvelqglrt vfggravgrp lalgtvennv ghsfaasgia hllkvilalh
     1141 rdtlpptanv daataaagad ggpfeipaha rpwprragaa rragvssysa tginvhlvvs
     1201 eappaavptp aagpallafs aptpealrqr grdllayvra tddrswspar lsanllsrrr
     1261 hfrhrcalia rdrahaeqll arfvanagds evltnpagaa sndddiraal rgeaaafdag
     1321 raplpleraa hwymqdiafd arrgfapadr vplslpgypf artrhwlrea pasgpdmaaq
     1381 pagedtqrwl lrqvatitge aadavsaean wsemgfdslm slrllsaire rtgvevplve
     1441 lldrrtpavl hahlealgaf aaaqgdgvtr adapplpavq ypwfgerlsa lraaeevvav
     1501 alaqqaaapa srqdrdrvla elldagiavf rdtdqavlla arsvgidahl rrfepdalaa
     1561 glgalapgql waplsqeqar hlhltermgn tawnvfhvfr lyaaevdver lrhalillar
     1621 qqdllrtryv avgdghaqcv selvgvsfds istrsredfh qfiqssrsha lleehggpai
     1681 riwlteadga fhlglvahha hadaftpgll fsqlmalyga lggeaaardd dwrqpdqywl
     1741 yalrqhdarg agadahraww rdalagvdve mrlpyrrdvm sssspsrela anqivpvppa
     1801 lgeriaelgr ahgisypqlf aavlaivlre ffgndrpvlq vihnqrdsaa laaclgdfsn
     1861 vafvpfeldp grsvidtlha vrrtlltalq haripaadll riagvdgedg cgamvgdvvf
     1921 dsadidtarv siagehgvst ymdavleqrr ihfldqplas lffqflridg rlyifhayrr
     1981 alfehetmqk lplrivelad amlrapdapv aglvasfapr fdelgrgvha paarmapase
     2041 agrdtasgaq geasgllerf lggdlsiaql rstlrasggh dgmgavae
//
LOCUS       WP_258006973             450 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Vibrio diazotrophicus].
ACCESSION   WP_258006973
VERSION     WP_258006973.1
KEYWORDS    RefSeq.
SOURCE      Vibrio diazotrophicus
  ORGANISM  Vibrio diazotrophicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 450)
  AUTHORS   Gao,G., Nara,T., Nakajima-Shimada,J. and Aoki,T.
  TITLE     Novel organization and sequences of five genes encoding all six
            enzymes for de novo pyrimidine biosynthesis in Trypanosoma cruzi
  JOURNAL   J Mol Biol 285 (1), 149-161 (1999)
   PUBMED   9878395
REFERENCE   2  (residues 1 to 450)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
REFERENCE   3  (residues 1 to 450)
  AUTHORS   Nygaard,P., Duckert,P. and Saxild,H.H.
  TITLE     Role of adenine deaminase in purine salvage and nitrogen metabolism
            and characterization of the ade gene in Bacillus subtilis
  JOURNAL   J Bacteriol 178 (3), 846-853 (1996)
   PUBMED   8550522
REFERENCE   4  (residues 1 to 450)
  AUTHORS   Lollier,M., Jaquet,L., Nedeva,T., Lacroute,F., Potier,S. and
            Souciet,J.L.
  TITLE     As in Saccharomyces cerevisiae, aspartate transcarbamoylase is
            assembled on a multifunctional protein including a
            dihydroorotase-like cryptic domain in Schizosaccharomyces pombe
  JOURNAL   Curr Genet 28 (2), 138-149 (1995)
   PUBMED   8590465
REFERENCE   5  (residues 1 to 450)
  AUTHORS   Jabri,E., Carr,M.B., Hausinger,R.P. and Karplus,P.A.
  TITLE     The crystal structure of urease from Klebsiella aerogenes
  JOURNAL   Science 268 (5213), 998-1004 (1995)
   PUBMED   7754395
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01979.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Vibrio diazotrophicus"
                     /db_xref="taxon:685"
     Protein         1..450
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=50259
     Region          5..443
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
     Site            order(76,78,238,275,326)
                     /site_type="active"
                     /db_xref="CDD:238617"
ORIGIN      
        1 mkrailgsvy htpvlgsfer lenalvvfdt etglidrvst peqpdysaqi qhfenifcle
       61 klkngqyllp gmidlhihap qwpqagkgld lpldqwlqty tfplesryqd iefaksiypr
      121 lvntylshgt ttavyfatvd vdasvylake clkqgqrafv gkvamdeksm cpdyyvdddy
      181 qasidltehf iqnvralngn dglvepivtp rfvptcsrea mkglgdlaqk yqcavqthas
      241 esdwardfsa kkygktdvel yqeagllgpr tllahsiflt qndldivkhh gsslahcpls
      301 niffanaalp crelldnniq lglgsdvaas pypslfrscf davthsrare ngvdyhlsse
      361 qrgtqdarit lleaywmatv ggakslqlnt giihpgrlfd avcidsthee fnifpeldsa
      421 qdifekiiay tdrnhiikvw vngqavkqsi
//
LOCUS       WP_258007043             185 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Burkholderia thailandensis].
ACCESSION   WP_258007043
VERSION     WP_258007043.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia thailandensis
  ORGANISM  Burkholderia thailandensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 185)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Burkholderia thailandensis"
                     /db_xref="taxon:57975"
     Protein         <1..185
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          1..177
                     /region_name="PBP2_CrgA_like_7"
                     /note="The C-terminal substrate binding domain of an
                     uncharacterized LysR-type transcriptional regulator
                     CrgA-like, contains the type 2 periplasmic binding fold;
                     cd08476"
                     /db_xref="CDD:176165"
ORIGIN      
        1 efkrrypdve ldldfndrlv dvveggfdav irsgtlsdss lmsrrlgpfs fllcaspayl
       61 aragaprtlr eldahacvry rfpttgklqp wallpdgsep pnlhttmtcn nmealraavm
      121 agfgigympd flardtladg alvtvldayr igpgqfsilw psnrqlspkv rvfvdfvcer
      181 lfrda
//
LOCUS       WP_258007069             196 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter [Xanthomonas citri].
ACCESSION   WP_258007069
VERSION     WP_258007069.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas citri
  ORGANISM  Xanthomonas citri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024946.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13557.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Xanthomonas citri"
                     /db_xref="taxon:346"
     Protein         1..196
                     /product="transporter"
                     /calculated_mol_wt=20683
     Region          1..>178
                     /region_name="Phenol_MetA_deg"
                     /note="Putative MetA-pathway of phenol degradation;
                     cl01768"
                     /db_xref="CDD:470334"
ORIGIN      
        1 msrlthrpam lavaliaagl pghacadgar dwenvpvdtt llfvyytysr neiafdpslp
       61 vdgaqiesql gllryartfa mgdriagvql lapygevsgk iggtplrtsa sgmgdvtgvf
      121 lvnvfgapal taqefrtwea gayltaslav tgptgsydrd ailnlgknrw sykpqlaygv
      181 plaegtllav ngnvqf
//
LOCUS       WP_258007088             215 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Xanthomonas citri].
ACCESSION   WP_258007088
VERSION     WP_258007088.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas citri
  ORGANISM  Xanthomonas citri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 215)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 215)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Xanthomonas citri"
                     /db_xref="taxon:346"
     Protein         1..215
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=23185
     Region          4..>194
                     /region_name="PRK06197"
                     /note="short chain dehydrogenase; Provisional"
                     /db_xref="CDD:235737"
ORIGIN      
        1 mngwtladlp sqrgrvaivt gaspgglgye talalagaga hvvltarnpd kgeaarrall
       61 arhpeaevcv ealdlarlas vrafakrlat rhaavdllin nagvmappqr qttadgmelq
      121 lgsnylghfa ltaqvlpllr aasaprvvnl sslahrqari dfddlqsers yrpwkaygqs
      181 klamlmfsle lqrrsnthgw acvrsprtre shrpp
//
LOCUS       WP_258007110             361 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme [Xanthomonas
            citri].
ACCESSION   WP_258007110
VERSION     WP_258007110.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas citri
  ORGANISM  Xanthomonas citri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Xanthomonas citri"
                     /db_xref="taxon:346"
     Protein         1..361
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /calculated_mol_wt=38129
     Region          16..345
                     /region_name="CsdA"
                     /note="Selenocysteine lyase/Cysteine desulfurase [Amino
                     acid transport and metabolism]; COG0520"
                     /db_xref="CDD:440286"
ORIGIN      
        1 merqpaafvl relpllldea rqalceviga dpedlalvpn vttalsavlr srvfvpgdei
       61 lttdhaylsc anlldfiars tgavvvvarv qvpvshpdei ldavlgrvta rtrlavldhv
      121 ssptaivfpi aalvqrldam gvdtlvdgah apgmlaldlr aigaayyagd chkwlcsprg
      181 agflhvrgdr qqglhpavis rgygdtatrr prlhlefdwl gtsdptallc ipaalqflag
      241 llpggldaly trnhalatsa aarlaqslpl mrvapdtmvg smvallmecq aptitaaqlq
      301 drlydahaid vavaawatpa gqlvrisaqa yntlddyarl gealahclaa psdaetqgvl
      361 a
//
LOCUS       WP_258007125             334 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 97 catalytic domain-containing protein
            [Xanthomonas citri].
ACCESSION   WP_258007125
VERSION     WP_258007125.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas citri
  ORGANISM  Xanthomonas citri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 334)
  AUTHORS   Kitamura,M., Okuyama,M., Tanzawa,F., Mori,H., Kitago,Y.,
            Watanabe,N., Kimura,A., Tanaka,I. and Yao,M.
  TITLE     Structural and functional analysis of a glycoside hydrolase family
            97 enzyme from Bacteroides thetaiotaomicron
  JOURNAL   J Biol Chem 283 (52), 36328-36337 (2008)
   PUBMED   18981178
REFERENCE   2  (residues 1 to 334)
  AUTHORS   Gloster,T.M., Turkenburg,J.P., Potts,J.R., Henrissat,B. and
            Davies,G.J.
  TITLE     Divergence of catalytic mechanism within a glycosidase family
            provides insight into evolution of carbohydrate metabolism by human
            gut flora
  JOURNAL   Chem Biol 15 (10), 1058-1067 (2008)
   PUBMED   18848471
REFERENCE   3  (residues 1 to 334)
  AUTHORS   Naumoff,D.G.
  TITLE     GH97 is a new family of glycoside hydrolases, which is related to
            the alpha-galactosidase superfamily
  JOURNAL   BMC Genomics 6, 112 (2005)
   PUBMED   16131397
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022039.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10566.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Xanthomonas citri"
                     /db_xref="taxon:346"
     Protein         1..334
                     /product="glycoside hydrolase family 97 catalytic
                     domain-containing protein"
                     /calculated_mol_wt=37762
     Region          3..236
                     /region_name="Glyco_hydro_97"
                     /note="Glycoside hydrolase 97; pfam10566"
                     /db_xref="CDD:463149"
     Region          239..332
                     /region_name="GH97_C"
                     /note="Glycosyl-hydrolase 97 C-terminal, oligomerization;
                     pfam14509"
                     /db_xref="CDD:464193"
ORIGIN      
        1 mcpgrsawqw lavgepredd qrqwvdwthq lgfeyylvdd gwrawarpwd tladtarhah
       61 tqgvglwlwm hsrdvqnape rrallrkiae tgivgvkvdf papanrdwsn wytdvardaa
      121 aehlmvdfhg amkptgtert wpnvltregv rghewhisry qrvlpadhdt ilpftrdvvg
      181 pgdytptvfe pkelmgnswa helaqmilft spflamgghp qnylanpald vlkavpatwd
      241 dtivlpgsep gkvaamarrh grdwfiavin ggaatrmaid leflkkghwk ltelrdahar
      301 pdawerterd vtrtgsiale lgprggfvgy lkaq
//
LOCUS       WP_258007183            1285 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase, partial [Burkholderia
            thailandensis].
ACCESSION   WP_258007183
VERSION     WP_258007183.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia thailandensis
  ORGANISM  Burkholderia thailandensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 1285)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 1285)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Burkholderia thailandensis"
                     /db_xref="taxon:57975"
     Protein         1..>1285
                     /product="SDR family NAD(P)-dependent oxidoreductase"
     Region          9..441
                     /region_name="PKS"
                     /note="polyketide synthases (PKSs) polymerize simple fatty
                     acids into a large variety of different products, called
                     polyketides, by successive decarboxylating Claisen
                     condensations. PKSs can be divided into 2 groups, modular
                     type I PKSs consisting of one or...; cd00833"
                     /db_xref="CDD:238429"
     Site            order(179,314,356)
                     /site_type="active"
                     /db_xref="CDD:238429"
     Region          <424..510
                     /region_name="KAsynt_C_assoc"
                     /note="Ketoacyl-synthetase C-terminal extension;
                     pfam16197"
                     /db_xref="CDD:465059"
     Region          <592..1141
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          <912..1131
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(1009,1033,1046,1050)
                     /site_type="active"
                     /db_xref="CDD:187656"
     Region          1212..1271
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; pfam00550"
                     /db_xref="CDD:425746"
ORIGIN      
        1 mnttraqhdd iavigiacrf pgasdyrqfw dnlcerrvsi geipgerwdw raywgdpqqd
       61 anacnsrwgg fvdevgafdl gffgmsarev dkmdpqqrla lelawhcfed aglrpsavak
      121 rdvgvfvgia nldykeivea haseidayya sgvaasvasn rlsywfdlrg psvtvdtacs
      181 gslyalhlar ealrrgecem alaggvslll tprrylgfar armlsptgai rafddaadgm
      241 vrgeggglvl lkplsraldd gdrifgvlag savnhsgrty sltypdadaq arviraafda
      301 agvspaqvsy veahgtgtpk gdpielegll rvfgaqprda laprcaigsv kanighlesa
      361 agiagviktl lalhhgmlpp mphfaalnhr vdaarfaaag lavadalapw eagasadgas
      421 aariagvsaf gfagtnahvv lreapaaara avaagradga gvlclsaktd aalervragf
      481 vewlardgar hafadicaal vsrrehfasr iavaacdvdg alaalrarad tassvyragr
      541 valdddgnlv dasgphdeqa dhdgsgehge hgeraragad dlsrarrras ryvrgaspda
      601 wgpsdgptph vplpdypfer tvcwtgprps ravagpargp avdeavdeav deagaadgdv
      661 fvleprwhla paadarpapa rpedaavvvc vvadaaqraa veralariat apacmfvepd
      721 atmgeparav dalvrtldgi adraradvsg vdtsgaaapi svwycadlar darapidvra
      781 ydrlltllqa laktraplrr vllagvsesl aadawpalvt vlaprrpala vtpvlfdhgt
      841 pealwvsall qearaaggaa vryaagersv avlaraanaa senaarlagg aplrtggcyl
      901 ltgglgglgr lfavrlmrry garvvalgrs ahdagvqasv aalcaeagag tlrylqadvc
      961 daaamaavld digrhegrln gvihaagced rasladksld dvhavlapkl aaatvldrlt
     1021 aglpldfvcl fsslagivgd fgcgayalgn rllmsyaqra dgrvdahgrr rrvvaiawpl
     1081 wrdgamgfdd pvkrdrylaa sgqrmldade gfawferlla spsaapvvla gerarivswl
     1141 gsidgapvad aspgaassga aapnaasdas rdteraeatd aaapivaaga pahahasapr
     1201 erdahgsarl palrgiaarv lgadaallde qasfadlgfd siglmdfara vgeafgidms
     1261 pamlfshvtl krlaghlatr lddap
//
LOCUS       WP_258007196             333 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Xanthomonas citri].
ACCESSION   WP_258007196
VERSION     WP_258007196.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas citri
  ORGANISM  Xanthomonas citri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 333)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Xanthomonas citri"
                     /db_xref="taxon:346"
     Protein         <1..333
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..310
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(69..70,73..74,77,80..81,83..84,87,90..91,94,97..98,
                     101..102,105,108..109,111..112,116,118..119,122,125..126,
                     129..130,133,136,139..140,143,147,150,157,161,164,
                     167..168,171,174..175,178..179,181..182,185..186,199..200,
                     203,206..207,210,213..214,216..217,220..221,224,227..228,
                     231,234..235,237..238,241..242,244..245,248,251..252,255,
                     258..259)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            139..172
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 dltarmsgef hgvfaqmrdd anatatqlae ivtgikasai sikgaaseia agnsdlsqrt
       61 eqqaasleet aasmeeltst vkqnaesarq anqlaigaas vatqggeiag qvvetmagie
      121 asskkiadii svidgiafqt nilalnaave aarageqgrg favvasevrt laqrssgaak
      181 eikdliadsv ervaagsvlv ntagrtmsel vtsvqrvtdi mgeisaasqe qsagieqvnq
      241 tvtqmdettq qnaalveeat aaarsleeqa vglteavavf kteqgtastv rtasvakaap
      301 avrakltsia gtaaakprav aasttvetsw qef
//
LOCUS       WP_258007224             656 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Serratia marcescens].
ACCESSION   WP_258007224
VERSION     WP_258007224.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 656)
  AUTHORS   Todone,F., Vanoni,M.A., Mozzarelli,A., Bolognesi,M., Coda,A.,
            Curti,B. and Mattevi,A.
  TITLE     Active site plasticity in D-amino acid oxidase: a crystallographic
            analysis
  JOURNAL   Biochemistry 36 (19), 5853-5860 (1997)
   PUBMED   9153426
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013434.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01266.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         1..656
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=70337
     Region          4..343
                     /region_name="DadA"
                     /note="Glycine/D-amino acid oxidase (deaminating) [Amino
                     acid transport and metabolism]; COG0665"
                     /db_xref="CDD:440429"
     Region          382..608
                     /region_name="SrkA"
                     /note="Ser/Thr protein kinase RdoA involved in Cpx stress
                     response, MazF antagonist [Signal transduction
                     mechanisms]; COG2334"
                     /db_xref="CDD:441905"
ORIGIN      
        1 mngtssriii vgagivgasi ayhlarqgqr vivveqaypa agatgssfgw isegvpdgap
       61 daflrreiva dwmrltqeip elwvnwsgal sygqapatqn pdnrrlslae vmalepalwr
      121 pdsqayfaar dgavdpqevt qrllervgal ggelllgrav sgflreaggq itgivtdega
      181 iaaervvlac gtgisalldg sefslpieas paillryhaa aqavntliag ddievrhaqn
      241 gdllaaedyp aggnvkrvee daqsaiqnrl hgsaplqlqt csvglrprpr dgypilgplg
      301 atclyvavmh pavmcaptlg rlvsdellyg vnpaiprgyr parfiddgge ggdiiaiagr
      361 faldiaqppl slypyapvyk igehvlkrtr pttdeahala ayltalrrqg vdvvapaacp
      421 qeiagsmwvv ypfvagekya grdeqiiaag rllgrihals sadnnaglav ydeyaltedd
      481 isadlaeias haasqgltld iealktrmlq iagrqtalsa rdlpcvetpy dfkadnlvyv
      541 apdrpvlidp dnalflprvf dlalalllfh ntlasapgrv fsvwewrlfl agygesvtlt
      601 adelqgwhqa vehlfldevl wlmadfadgw rdprqtalfv slfklldnls gygltp
//
LOCUS       WP_258007307              34 aa            linear   BCT 02-MAR-2025
DEFINITION  putative holin-like toxin [Staphylococcus sp. 17KM0847].
ACCESSION   WP_258007307
VERSION     WP_258007307.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus sp. 17KM0847
  ORGANISM  Staphylococcus sp. 17KM0847
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 34)
  AUTHORS   Rajesh,T., Anthony,T., Saranya,S., Pushpam,P.L. and Gunasekaran,P.
  TITLE     Functional characterization of a new holin-like antibacterial
            protein coding gene tmp1 from goat skin surface metagenome
  JOURNAL   Appl Microbiol Biotechnol 89 (4), 1061-1073 (2011)
   PUBMED   20927512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16935.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..34
                     /organism="Staphylococcus sp. 17KM0847"
                     /db_xref="taxon:2583989"
     Protein         1..34
                     /product="putative holin-like toxin"
                     /calculated_mol_wt=3524
     Region          1..34
                     /region_name="Hol_Tox"
                     /note="Putative Holin-like Toxin (Hol-Tox); pfam16935"
                     /db_xref="CDD:435666"
ORIGIN      
        1 msivdvlglm igfgtfivtl iglviaivkl dhkk
//
LOCUS       WP_258007306              35 aa            linear   BCT 02-MAR-2025
DEFINITION  putative holin-like toxin [Staphylococcus sp. 17KM0847].
ACCESSION   WP_258007306
VERSION     WP_258007306.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus sp. 17KM0847
  ORGANISM  Staphylococcus sp. 17KM0847
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 35)
  AUTHORS   Rajesh,T., Anthony,T., Saranya,S., Pushpam,P.L. and Gunasekaran,P.
  TITLE     Functional characterization of a new holin-like antibacterial
            protein coding gene tmp1 from goat skin surface metagenome
  JOURNAL   Appl Microbiol Biotechnol 89 (4), 1061-1073 (2011)
   PUBMED   20927512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16935.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..35
                     /organism="Staphylococcus sp. 17KM0847"
                     /db_xref="taxon:2583989"
     Protein         1..35
                     /product="putative holin-like toxin"
                     /calculated_mol_wt=3624
     Region          3..35
                     /region_name="Hol_Tox"
                     /note="Putative Holin-like Toxin (Hol-Tox); pfam16935"
                     /db_xref="CDD:435666"
ORIGIN      
        1 mvsivdvlgl migfgtfivt liglviaivk ldhkk
//
LOCUS       WP_258007318             180 aa            linear   BCT 02-MAR-2025
DEFINITION  YpiB family protein [Staphylococcus sp. 17KM0847].
ACCESSION   WP_258007318
VERSION     WP_258007318.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus sp. 17KM0847
  ORGANISM  Staphylococcus sp. 17KM0847
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020439.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08864.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Staphylococcus sp. 17KM0847"
                     /db_xref="taxon:2583989"
     Protein         1..180
                     /product="YpiB family protein"
                     /calculated_mol_wt=21134
     Region          3..177
                     /region_name="YpiB"
                     /note="Uncharacterized conserved protein YpiB, UPF0302
                     family [Function unknown]; COG5582"
                     /db_xref="CDD:444321"
ORIGIN      
        1 mfeiplqeak qrfidhllsq ytfksrisvw llnylkatpq lldmiyfvdq tvehhptlei
       61 atvesgasgv vyyrdeehli nmdtifyrii qttdrvdiki hlndngnrdh lldhillyql
      121 ldtqghpeyl sdlyyvtlsk tteqqllkll taqidmsltt ydaasfyhlt rlrntlklrq
//
LOCUS       WP_258007345              89 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF559 domain-containing protein, partial [Cylindrospermopsis
            raciborskii].
ACCESSION   WP_258007345
VERSION     WP_258007345.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016370.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04480.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         1..>89
                     /product="DUF559 domain-containing protein"
     Region          12..85
                     /region_name="MTES_1575"
                     /note="REase_MTES_1575; pfam18741"
                     /db_xref="CDD:465853"
ORIGIN      
        1 msichhpelk dynaytqvgc seyridlaiv hkdrpgefvl giecdgasyh ssltardrdr
       61 lrqeqleklg wkiyriwste wfhnkgsqv
//
LOCUS       WP_258007365             382 aa            linear   BCT 02-MAR-2025
DEFINITION  aconitase family protein, partial [Pseudomonas syringae].
ACCESSION   WP_258007365
VERSION     WP_258007365.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012550.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00330.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         1..>382
                     /product="aconitase family protein"
     Region          2..>382
                     /region_name="2met_isocit_dHY"
                     /note="2-methylisocitrate dehydratase, Fe/S-dependent;
                     TIGR02333"
                     /db_xref="CDD:131386"
ORIGIN      
        1 mnsefrktlp gtqldyfdar aavealkpga yatlpytsrv laenlvrrcd patlnaslsq
       61 lierkrdldf pwfparvvch dilgqtalvd laglrdaias qggdpalvnp vvpvqlivdh
      121 slaveadgnd pqalaknrai edrrnedrfh fidwtklafk nvevippgng imhqinlekm
      181 spvvqvldgv afpdtlvgtd shtphvdalg viaigvggle aenvmlgras wmrlpdiigv
      241 eltgrrqpgi tatdvvlalt eylrqqkvvg aylefygaga ssltlgdrat isnmapeyga
      301 taamfsidsq tidylrltgr edeqvklvel yarhtglwsd sltevqyerv lsfdlssvvr
      361 nmagpsnpha rvatadlaak gi
//
LOCUS       WP_258007417              68 aa            linear   BCT 02-MAR-2025
DEFINITION  integrase core domain-containing protein, partial [Burkholderia
            thailandensis].
ACCESSION   WP_258007417
VERSION     WP_258007417.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia thailandensis
  ORGANISM  Burkholderia thailandensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025063.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13683.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Burkholderia thailandensis"
                     /db_xref="taxon:57975"
     Protein         <1..68
                     /product="integrase core domain-containing protein"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <22..68
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 ipprqdlter rlhpsstsqf lewlppyhwd dldhvqrfat dwmwiynhdr pnmalggftp
       61 kqrlamaa
//
LOCUS       WP_258007494             315 aa            linear   BCT 02-MAR-2025
DEFINITION  type IV secretion system protein, partial [Alicycliphilus
            denitrificans].
ACCESSION   WP_258007494
VERSION     WP_258007494.1
KEYWORDS    RefSeq.
SOURCE      Alicycliphilus denitrificans
  ORGANISM  Alicycliphilus denitrificans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Alicycliphilus.
REFERENCE   1  (residues 1 to 315)
  AUTHORS   Li,P.L., Hwang,I., Miyagi,H., True,H. and Farrand,S.K.
  TITLE     Essential components of the Ti plasmid trb system, a type IV
            macromolecular transporter
  JOURNAL   J Bacteriol 181 (16), 5033-5041 (1999)
   PUBMED   10438776
REFERENCE   2  (residues 1 to 315)
  AUTHORS   Liang,Y., Aoyama,T. and Oka,A.
  TITLE     Structural characterization of the virB operon on the
            hairy-root-inducing plasmid A4
  JOURNAL   DNA Res 5 (2), 87-93 (1998)
   PUBMED   9679196
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04610.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Alicycliphilus denitrificans"
                     /db_xref="taxon:179636"
     Protein         <1..315
                     /product="type IV secretion system protein"
                     /GO_process="GO:0030255 - protein secretion by the type IV
                     secretion system [Evidence IEA]"
     Region          <34..314
                     /region_name="PRK13875"
                     /note="conjugal transfer protein TrbL; Provisional"
                     /db_xref="CDD:237537"
ORIGIN      
        1 sletcsivst ilqswarcpl ltarsiwghr tdtfklttla gfvlvpfalw nktaflaekv
       61 lgnvvssgik vlvlavivgi gsglfaefni pagsepsidq alvimlasls mlalgifgpg
      121 iatglvsggp qlgagamaga aigaagaava vgaaasgvgs avaagarmap aaaraaasga
      181 rsmasnassa ksayqagsas aggglkgaaa glgnvaktga qaagqkvadg arslkeraas
      241 alrpddamta sgagaaaqgt sdaaasptst eqpawakrlh rrqqithaat taahtlrggd
      301 agsssqgpsl rspdd
//
LOCUS       WP_258007504             102 aa            linear   BCT 02-MAR-2025
DEFINITION  GntR family transcriptional regulator, partial [Pseudomonas
            syringae].
ACCESSION   WP_258007504
VERSION     WP_258007504.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 102)
  AUTHORS   Hillerich,B. and Westpheling,J.
  TITLE     A new GntR family transcriptional regulator in streptomyces
            coelicolor is required for morphogenesis and antibiotic production
            and controls transcription of an ABC transporter in response to
            carbon source
  JOURNAL   J Bacteriol 188 (21), 7477-7487 (2006)
   PUBMED   16936034
REFERENCE   2  (residues 1 to 102)
  AUTHORS   Rigali,S., Nothaft,H., Noens,E.E., Schlicht,M., Colson,S.,
            Muller,M., Joris,B., Koerten,H.K., Hopwood,D.A., Titgemeyer,F. and
            van Wezel,G.P.
  TITLE     The sugar phosphotransferase system of Streptomyces coelicolor is
            regulated by the GntR-family regulator DasR and links
            N-acetylglucosamine metabolism to the control of development
  JOURNAL   Mol Microbiol 61 (5), 1237-1251 (2006)
   PUBMED   16925557
REFERENCE   3  (residues 1 to 102)
  AUTHORS   Gorelik,M., Lunin,V.V., Skarina,T. and Savchenko,A.
  TITLE     Structural characterization of GntR/HutC family signaling domain
  JOURNAL   Protein Sci 15 (6), 1506-1511 (2006)
   PUBMED   16672238
REFERENCE   4  (residues 1 to 102)
  AUTHORS   Rigali,S., Schlicht,M., Hoskisson,P., Nothaft,H., Merzbacher,M.,
            Joris,B. and Titgemeyer,F.
  TITLE     Extending the classification of bacterial transcription factors
            beyond the helix-turn-helix motif as an alternative approach to
            discover new cis/trans relationships
  JOURNAL   Nucleic Acids Res 32 (11), 3418-3426 (2004)
   PUBMED   15247334
  REMARK    Publication Status: Online-Only
REFERENCE   5  (residues 1 to 102)
  AUTHORS   Lee,M.H., Scherer,M., Rigali,S. and Golden,J.W.
  TITLE     PlmA, a new member of the GntR family, has plasmid maintenance
            functions in Anabaena sp. strain PCC 7120
  JOURNAL   J Bacteriol 185 (15), 4315-4325 (2003)
   PUBMED   12867439
REFERENCE   6  (residues 1 to 102)
  AUTHORS   Rigali,S., Derouaux,A., Giannotta,F. and Dusart,J.
  TITLE     Subdivision of the helix-turn-helix GntR family of bacterial
            regulators in the FadR, HutC, MocR, and YtrA subfamilies
  JOURNAL   J Biol Chem 277 (15), 12507-12515 (2002)
   PUBMED   11756427
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012610.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00392.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         1..>102
                     /product="GntR family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
     Region          55..>102
                     /region_name="FadR"
                     /note="DNA-binding transcriptional regulator, FadR family
                     [Transcription]; COG2186"
                     /db_xref="CDD:441789"
ORIGIN      
        1 mrgkrvvrhc slssvryasi gcdtrtkhvp stvilshpkr tdhlamehtt spkgrrsslt
       61 qqlvaefarr irdgeiqsge klpteqviir esgvsrtvvr ea
//
LOCUS       WP_258007511             152 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase, partial [Pseudomonas syringae].
ACCESSION   WP_258007511
VERSION     WP_258007511.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 152)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         <1..152
                     /product="PfkB family carbohydrate kinase"
     Region          <1..144
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
     Site            order(43,72,102,105..106,109)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238177"
ORIGIN      
        1 rarlrgvrva fdnnyrprlw asveqareay qaclphvdla llteddeqal ygyadseell
       61 aayrdrgige tvvkrgaqsc lieaggerfe vaplkvehvv dttaagdsfs aaylaarlmg
      121 erpqqaaeag hrlaavviqh pgalieksfm pv
//
LOCUS       WP_258007542             269 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258007542
VERSION     WP_258007542.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 269)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>269
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          3..53
                     /region_name="TubC_N"
                     /note="TubC N-terminal docking domain; pfam18563"
                     /db_xref="CDD:436580"
     Region          98..>269
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mnvnslldll qrknirihvd rdelvvrapr galnaeltqa lkkskaelid vlrrrgaqas
       61 pdpvritpaq ltlvalsqes idalvakveg gaanvqdiyp laplqegilf hhlmsgesdp
      121 yvlsgvlafr srevmerfvs alqqvidrhd ilrtgffweg leqpvqvvqr ratlpvsvve
      181 ldaregdivr qletrfdsrg yrmdvsrapl mhvhaacdge herwvarvlf hhlsidhttl
      241 ervieearai eqgraedlpq pvpfrnfva
//
LOCUS       WP_258007560             293 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258007560
VERSION     WP_258007560.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 293)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>293
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          110..>293
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mtandllall nskgialsvk gdnlaitgde kvledpglla llrankpali dlikdrhgtv
       61 ggafrvppnr ipadaeriap eqltlvrldq geidalvarv dggaanvqdi yplvpmqegm
      121 lfhhllsqqg daylesylla frtrerldrf lsalqqvidr hdilrtaffw eglphsvqvv
      181 qrratlplnv veldprdgdv gqqlearydp rshridvgra plmqvhaahd aaggrwlvrl
      241 lshhlavdht tlervieear aieqgraedl prpvpfrnfv aqarlgvsea dhe
//
LOCUS       WP_258007593             848 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase, partial [Burkholderia
            thailandensis].
ACCESSION   WP_258007593
VERSION     WP_258007593.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia thailandensis
  ORGANISM  Burkholderia thailandensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 848)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 848)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..848
                     /organism="Burkholderia thailandensis"
                     /db_xref="taxon:57975"
     Protein         <1..848
                     /product="SDR family NAD(P)-dependent oxidoreductase"
     Region          118..514
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(262,264..265,267,287..288,290,383..385,430..432,446,
                     450,476..479)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187656"
     Site            order(407,432,446,450)
                     /site_type="active"
                     /db_xref="CDD:187656"
ORIGIN      
        1 fatsaatgap paaspvaaaa agasarsvpa wrftwrpvpv dpvpdepspa lsgkrialvn
       61 grggtierva aalartcakv svfapaanad haeaarafvn eagpldgivd lgleapfald
      121 dasaweapmr rtvellkacy gdwaaeddts rlfyvaltwm dgqmgygdda gaqplgglwa
      181 glaktlpqel pncnvrvldi apdetgrvdr lvvnelyrwg lfevgyrngv rytlhakrde
      241 lpplavdara algpgdtvlf sggargigll caralaerhg ctvlvtgret ppdggepwma
      301 ldeagfkryg leqlraatpe rppkairasl qrlkhrrelk aaldemaalg lpvhyrvcdv
      361 tdraavralc delgdslriv ihnagvdqpv rliqkraddf ahtvrtkvlg fanlcdavra
      421 rprlaqfcnv gsltgrwggm tgetdyaaan ealarlglwa akhalppacg vktlvwptwe
      481 gvgmitnfav tqryvspmnv eegvrhwlre laspgggevm fmgavgrapt pvqikgfqpi
      541 relpnigelv trrhhvgepv rfrpfkrfeg ryaidpavap yarafrfngr avlpaslvle
      601 hacavgdwvm pptgeprels emtnvvlrld alpdvpagda pveiaseaag ymigdvwcvd
      661 vrcsdartqa ellsmtlvyr pqpeqigaay arapdtkpep apltsaphaa wdgellpagd
      721 wsvpddasag ivrigrvppa avlslwtlpf plelrlpvnh vehvlrvlla ewgaaqtdap
      781 svwrigaakl arlpaasadg vveyatgrfa vldargyvll rvddtrvdsd aahaapaetv
      841 aladplta
//
LOCUS       WP_258007655             258 aa            linear   BCT 02-MAR-2025
DEFINITION  pyridoxal-phosphate dependent enzyme, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258007655
VERSION     WP_258007655.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012512.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00291.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>258
                     /product="pyridoxal-phosphate dependent enzyme"
     Region          13..>258
                     /region_name="PRK12483"
                     /note="threonine dehydratase; Reviewed"
                     /db_xref="CDD:237111"
ORIGIN      
        1 mqsddvvtet peappreava ptaiaprart lddylklvln arvydvaret alerarnlsa
       61 rlgnavylkr ednqpvfsfk lrgaynkmah ipadalargv itasagnhaq gvafsaarmn
      121 vkavivvpvt tpqvkvdavr ahggptvevi qagesysday ahavkvqaer gltfvhpfdd
      181 pyviagqgtv ameilrqhqg pihaifvpig ggglaagvaa yvkavrpeik vigvqtddsc
      241 amkqslaagr rieltevg
//
LOCUS       WP_258007662             906 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Serratia marcescens].
ACCESSION   WP_258007662
VERSION     WP_258007662.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 906)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 906)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 906)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 906)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         1..906
                     /product="ATP-binding protein"
                     /calculated_mol_wt=99624
     Region          <31..900
                     /region_name="PRK09959"
                     /note="acid-sensing system histidine kinase EvgS"
                     /db_xref="CDD:182169"
ORIGIN      
        1 mrrpwlvllt llpawawatg dihvgllddr ppysdfdvnh qlqgaatdll salaaqnglh
       61 fttqaasshs qlaqmlneqs iqlalpppqs sppppgilvs hpllqqrwal vvrqdrlplq
      121 ressldlrhq rvlilrhspa qagllaaypg valsevaslh eairllnaga aqgivcdatq
      181 aallasnlyp grlsvrplpa ivsnqplwla pgqdallqri nhaidalptg vaqsinerwl
      241 lnstlsgmqp sgtagdrwfk pltavsaals lfligflste ifrrrraerg lrdalkywqt
      301 llnsiptpll vcdplgnith cnqallkslt ltqqqvighs leqftarnpi ipaisqqeri
      361 aaignmqpqf sdramviqga qreiaqwlaa ysdsrmtpqg lllgwydise rkrlerdlad
      421 alqqatnasr ekshflarms heirspmnai lgileletqr petagtslpi ayaasrqllq
      481 ivgdvldisk ieagemhlqa hptelhpllt qaldtyaala aqkslrldsd ieavwqhqyl
      541 lddakltqil nnllsnaiky teqgfvalqv dvqpqdphhd nltfsisdsg igiapplqqk
      601 ilqpyaqvda napastglgl aictqlvqlm gselrvdstp qqgsrfsftl tlprttvgde
      661 aqetltaplv ehslrvlvvd dlpanltvmk lqleklghqv ttcdsgcqal qwleqspfdl
      721 vltdcqmpvf tgyqlaqwqr ereqgyrryl pivgctanaf ndeqyrclaa gmdavlikpl
      781 tqqdlrtlvs eqqairvdmr eiqlmaagqp qvmttlidel qrssdadrqr llaataqpdv
      841 faavlhrqkg sfalagyqsg vnlcqqleqh ppasaeptva llrmnalilr fialleqqra
      901 avnvdd
//
LOCUS       WP_258007688             370 aa            linear   BCT 02-MAR-2025
DEFINITION  FKBP-type peptidyl-prolyl cis-trans isomerase N-terminal
            domain-containing protein [Serratia marcescens].
ACCESSION   WP_258007688
VERSION     WP_258007688.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 370)
  AUTHORS   Saul,F.A., Arie,J.P., Vulliez-le Normand,B., Kahn,R., Betton,J.M.
            and Bentley,G.A.
  TITLE     Structural and functional studies of FkpA from Escherichia coli, a
            cis/trans peptidyl-prolyl isomerase with chaperone activity
  JOURNAL   J Mol Biol 335 (2), 595-608 (2004)
   PUBMED   14672666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013509.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01346.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         1..370
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase
                     N-terminal domain-containing protein"
                     /GO_process="GO:0006457 - protein folding [Evidence IEA]"
                     /calculated_mol_wt=39161
     Region          123..370
                     /region_name="PRK10902"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     Provisional"
                     /db_xref="CDD:236791"
ORIGIN      
        1 mglwllalsg avcaaddgip allkfaeqrq appaalkeet arkpapapaa kpaakpaava
       61 gadgarltsl khsvqqqaek irqlerqlaa aqaaaapkse rtdvdirpla dalkalrqav
      121 aplpevtvla asltraeqrs asltaqlaqq rqrvdallae rrqaaeapvl aseadkqaya
      181 agvslgrdil hlqqenrrag leadrqllla giadtlagrl rldeaaidga lraaqqrlqq
      241 tqappldgka yladfarqeg vkrdalgfyy rvdyagsgai gaddrvdivv resltdgrvv
      301 kdmelagtvi sqpltryppl fraaieklqr hgsitlavpp alaygkqgsp paippnatmi
      361 ytlriadvqp
//
LOCUS       WP_258007696             165 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: fimbrial protein [Serratia].
ACCESSION   WP_258007696
VERSION     WP_258007696.1
KEYWORDS    RefSeq.
SOURCE      Serratia
  ORGANISM  Serratia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012635.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00419.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Serratia"
                     /db_xref="taxon:613"
     Protein         1..165
                     /product="fimbrial protein"
                     /GO_component="GO:0009289 - pilus [Evidence IEA]"
                     /GO_process="GO:0007155 - cell adhesion [Evidence IEA]"
                     /calculated_mol_wt=17549
     Region          25..165
                     /region_name="Fimbrial"
                     /note="Fimbrial protein; cl01416"
                     /db_xref="CDD:445401"
ORIGIN      
        1 mnrlfnttcm lcltgafcll aagvaqaatt vsvkvtvlap lpcklnddqp ievnfgdevm
       61 ttridgenyl tpvnykltcd kpekndmrll lagtgagfdd kvlqtsvdgl giaflnngsr
      121 ialnswqkft lsdmptlaav pvkqanaalp tgeftasatl rvdyq
//
LOCUS       WP_258007222              78 aa            linear   BCT 02-MAR-2025
DEFINITION  NifU N-terminal domain-containing protein [Staphylococcus aureus].
ACCESSION   WP_258007222
VERSION     WP_258007222.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 78)
  AUTHORS   Dos Santos,P.C., Smith,A.D., Frazzon,J., Cash,V.L., Johnson,M.K.
            and Dean,D.R.
  TITLE     Iron-sulfur cluster assembly: NifU-directed activation of the
            nitrogenase Fe protein
  JOURNAL   J Biol Chem 279 (19), 19705-19711 (2004)
   PUBMED   14993221
REFERENCE   2  (residues 1 to 78)
  AUTHORS   Tong,W.H., Jameson,G.N., Huynh,B.H. and Rouault,T.A.
  TITLE     Subcellular compartmentalization of human Nfu, an iron-sulfur
            cluster scaffold protein, and its ability to assemble a [4Fe-4S]
            cluster
  JOURNAL   Proc Natl Acad Sci U S A 100 (17), 9762-9767 (2003)
   PUBMED   12886008
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020295.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08712.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..78
                     /product="NifU N-terminal domain-containing protein"
                     /calculated_mol_wt=8751
     Region          3..77
                     /region_name="Nfu_N"
                     /note="Scaffold protein Nfu/NifU N terminal; pfam08712"
                     /db_xref="CDD:462574"
ORIGIN      
        1 msetpnhntm kitlsesres mtsdtytkvd dsqpafindi lkvegvksif hvmdfisvdk
       61 endanwetvl pkveavfe
//
LOCUS       WP_258007701             448 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Serratia
            marcescens].
ACCESSION   WP_258007701
VERSION     WP_258007701.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 448)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         <1..>448
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..398
                     /region_name="E-C_NRPS"
                     /note="Dual Epimerization/Condensation (E/C) domains of
                     nonribosomal peptide synthetases (NRPSs); cd19544"
                     /db_xref="CDD:380466"
ORIGIN      
        1 lfhhllaeqg dpyqlsavlr fdsrarldaw laamqqvidr hdilrtafit qgvsspvqvv
       61 wrkaelalse rrfdladgpv wqqlaagfdp lhqrqdltra pllnftvaqe edgrwcalqq
      121 whhligdhst lafmeqevse ilagrgarlg aaqpfrnava qarltlseae herffrdmla
      181 disepvlpfg lsdvhgegrq ivsryqalss alnlrlrrqa rrlgvslasl chlawaqvla
      241 rvsgrdavvf gtvllgrlqg aegaeralgl fintlplrld idrrgaeaaa reahvrlsgl
      301 lahehaplal aqrcsgvspg aplfsallny rhnngeaval pegvsllsae ertnypfvls
      361 vedggdslgi taqvteaida qrvcdymvqa ldslaqaleq apdtpvcsla vvpeaerell
      421 lhgwnrterd ypldqtlaal ferqvrrt
//
LOCUS       WP_258007750             267 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            thailandensis].
ACCESSION   WP_258007750
VERSION     WP_258007750.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia thailandensis
  ORGANISM  Burkholderia thailandensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 267)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Burkholderia thailandensis"
                     /db_xref="taxon:57975"
     Protein         1..>267
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          50..>266
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mtppdllsla arfarlpdtq rkqflaklgd agidfrmlpi ppredraasv pasfaqtrlw
       61 lharllgesa ayhiterlrl dgaldanalr lscdaliarh ealrttfaeg adgvlqtvha
      121 pmrcpwrftd lagvpaatrd araaavaerd eaepfdlahg plvrahlirl daaahwlvlt
      181 thhivsdgws advmlaelss fyrsyatgda vslaplpvqy adyalwqrrw leagegerql
      241 ahwratldas rdvlllpgaa trpaqrg
//
LOCUS       WP_258007681             167 aa            linear   BCT 02-MAR-2025
DEFINITION  type II secretion system protein N [Serratia marcescens].
ACCESSION   WP_258007681
VERSION     WP_258007681.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 167)
  AUTHORS   Korotkov,K.V., Johnson,T.L., Jobling,M.G., Pruneda,J., Pardon,E.,
            Heroux,A., Turley,S., Steyaert,J., Holmes,R.K., Sandkvist,M. and
            Hol,W.G.
  TITLE     Structural and functional studies on the interaction of GspC and
            GspD in the type II secretion system
  JOURNAL   PLoS Pathog 7 (9), e1002228 (2011)
   PUBMED   21931548
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022800.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11356.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         1..167
                     /product="type II secretion system protein N"
                     /calculated_mol_wt=18581
     Region          5..>166
                     /region_name="T2SSC"
                     /note="Type II secretion system protein C; cl44344"
                     /db_xref="CDD:457689"
ORIGIN      
        1 mskrlidffi llfflvnltf mlsqvwrmit vnnepvephl esgreqvrhg vfpqeddiek
       61 indahwfgry qaaksgekar gykvgewtig aellanapea atlgkitgll fsdnaekslv
      121 ivehggkqtg ygvgdrlvgs navivrilkn killdengyy aaltfke
//
LOCUS       WP_258007837             182 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Salmonella enterica].
ACCESSION   WP_258007837
VERSION     WP_258007837.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024573.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13175.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         1..182
                     /product="AAA family ATPase"
                     /calculated_mol_wt=20451
     Region          1..>91
                     /region_name="YbjD"
                     /note="Predicted ATP-dependent endonuclease of the OLD
                     family, contains P-loop ATPase and TOPRIM domains
                     [Replication, recombination and repair]; COG3593"
                     /db_xref="CDD:442812"
ORIGIN      
        1 meivsfkvsq yrsisgeiss dnfngltivg qnnsgktnll kamrvffegk fnpdlydyek
       61 dkphgvkqgq tsfavrftfs eselddvsed lsqddddddd dsiielgvlg eqeepsnsis
      121 fddgsskqqe skptqsrgrk lslrdrylql fnmiddsrlk spqnevtvhl tisnknisni
      181 hq
//
LOCUS       WP_258007844             135 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5655 domain-containing protein, partial [Tetragenococcus
            halophilus].
ACCESSION   WP_258007844
VERSION     WP_258007844.1
KEYWORDS    RefSeq.
SOURCE      Tetragenococcus halophilus
  ORGANISM  Tetragenococcus halophilus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Tetragenococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039496.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18899.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Tetragenococcus halophilus"
                     /db_xref="taxon:51669"
     Protein         <1..135
                     /product="DUF5655 domain-containing protein"
     Region          <24..131
                     /region_name="COG3586"
                     /note="Uncharacterized protein domain, C-terminal to
                     COG1479 DNAse/DNA nickase [General function prediction
                     only]"
                     /db_xref="CDD:442805"
ORIGIN      
        1 kaiefnagpd lamdypiflc akleliskgn eesqalyhsi kqaildwdpn iqvtankhyv
       61 sfkrktnfcd iaiqkkqvki wlnakmgdld dsqnifrdvt nighygngdy evsiqydtnv
      121 eyilsvikqa wmrgk
//
LOCUS       WP_258007865             496 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258007865
VERSION     WP_258007865.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 496)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>496
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          65..486
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mharafhsvi spyhirlplr ririireyvn ttqeygvmtd mldsseisvr ddidpvpgaa
       61 pervlaltag qygiwldqml npdlpcyilg ailridgtfd ealltsvvne vvnandslra
      121 mlvseggsvr qrvlsdvele iahidfsgsa hphdsawrym rtafdtafal dgllcdfriv
      181 respsrtywm yrchhlvadg qsvsmicrmi vdlynrrasa dmarieptps yfdsldddrk
      241 yaessryerd aqfwqdkfss lpppllssrs seaaarpasf pdgqvnltie rakydrlgri
      301 aeasgctivh vmfgvlalyf srafqvdevv igmpvhnrst aqqkraigmf asvvpiripv
      361 dgnerfvsll ngvsaelrhc yrhqrfpiae lnrrlglvrt grrqlfdltl sfekfpldfy
      421 igdvklglts mrhrfeqtpi tvnvqdyhed qdlvmqfnyd vnafshaevd nigtriggll
      481 daliehhddm pvgmlp
//
LOCUS       WP_258007895             709 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258007895
VERSION     WP_258007895.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>709
                     /product="Ig-like domain-containing protein"
     Region          <208..587
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          592..699
                     /region_name="Big_13"
                     /note="Bacterial Ig-like domain; pfam19077"
                     /db_xref="CDD:465968"
ORIGIN      
        1 mdsgdeivfs slpanselkr dgadlvvrtp detfvlkdaa akladesvvv rlgeqplvvt
       61 qapnenthlp agvqlaglaa pgqnsafglq sfvsaageqs lqsdtvspva mgavttsgik
      121 daglsdgglm gnlrtdvrpt deipmyqqkl tqlpldprid vpsrtdfgvn aaryepapaa
      181 vtapnfvmsp gdkdpgagvl qnvtnpqldg sgpanavvta yevasdghli slgtatsdgm
      241 gnfaitpntp ladgthdivf qaqkgdltsp fsaptsvvid tkintptigl passdsfgag
      301 tvgtnhddit nvtnptltgt aeagatvyvs dgsghtvsti adsngnysvq apgtlaegnn
      361 vftvqavdka gntsgtaqqn vtldtvaatl papqldhgsd tgasnsdgit ratqpvltgg
      421 gaepnalvtv yadgvsigqa tadslghyti hsgvladgth qitarqidia gntsalsgaa
      481 lvtidtsepa panlklvddt fglhtagtps dgltkdsrvt isgtasagdv vtlmdgatsv
      541 gqvtadasgn wtiqtaslad gthsltasav dlagntspas stlpvtvdti npppaltlsp
      601 lsdtfgsgts gtnhdnitsa tlptfngtaa agsyvqlydv tggttvsvgs avadssggwt
      661 ttltsplsgs asgvshtlva vgvdpagnts tvsgpdvvvi dnaaavlpg
//
LOCUS       WP_258007905             234 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258007905
VERSION     WP_258007905.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 234)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>234
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          3..53
                     /region_name="TubC_N"
                     /note="TubC N-terminal docking domain; pfam18563"
                     /db_xref="CDD:436580"
     Region          98..>233
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mnvnslldll qrknirihvd rdelvvrapr galnaeltqa lkkskaelid vlrrrgaqas
       61 pdpvritpaq ltlvalsqes idalmtkveg gaanvqdiyp laplqegilf hhlmsgesdp
      121 yvlsgvlafr srevmerfvs alqqvidrhd ilrtgffweg leqpvqvvqr ratlpvsvve
      181 ldaregdivr qlearfdsrg yrmdvsrapl mhvhaacdge herwvarvlf hhls
//
LOCUS       WP_258007912             504 aa            linear   BCT 02-MAR-2025
DEFINITION  glucosaminidase domain-containing protein, partial [Tetragenococcus
            halophilus].
ACCESSION   WP_258007912
VERSION     WP_258007912.1
KEYWORDS    RefSeq.
SOURCE      Tetragenococcus halophilus
  ORGANISM  Tetragenococcus halophilus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Tetragenococcus.
REFERENCE   1  (residues 1 to 504)
  AUTHORS   Nambu,T., Minamino,T., Macnab,R.M. and Kutsukake,K.
  TITLE     Peptidoglycan-hydrolyzing activity of the FlgJ protein, essential
            for flagellar rod formation in Salmonella typhimurium
  JOURNAL   J Bacteriol 181 (5), 1555-1561 (1999)
   PUBMED   10049388
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013954.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01832.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Tetragenococcus halophilus"
                     /db_xref="taxon:51669"
     Protein         1..>504
                     /product="glucosaminidase domain-containing protein"
                     /GO_function="GO:0004040 - amidase activity [Evidence
                     IEA]"
     Region          158..>504
                     /region_name="PRK06347"
                     /note="1,4-beta-N-acetylmuramoylhydrolase"
                     /db_xref="CDD:180536"
ORIGIN      
        1 mrssltrker rkvqermsly gnfkkgaavv gttvtavsmv tpllpldnvf aeeadssvva
       61 syeadssvva syesedgaqd fqsqtddqtv eepsaeaenn vtqdnsveag dveqaeepad
      121 nevaydqaqq fsterensqd qvqpqeegee peedlqqeeq tsedeeqdae aeedlpetpe
      181 eeaeqlqeia gqhpgdqgpa eastfsaqls pepsafieef aahaapvaes nnlyasvmia
      241 qavvesgwgs salsqapnhn lfgikgsyng qsvtmptqey ingryvtvda afrkypsyta
      301 sfqdnaalls tslysgawks ntnsykdata altglyatap dyntvlngii esydltrfds
      361 gndggmidtg tggnentden tgednnsand dnssnsnsst ytvqagdsvw liadqngitm
      421 nqlrdwnniq ndfvypgqel tvskdgssdd snnsngtgns dnnsnssnng sstytvkagd
      481 svwliadqng itmnqlrdwn niqn
//
LOCUS       WP_258007906              66 aa            linear   BCT 02-MAR-2025
DEFINITION  putative holin, partial [Burkholderia pseudomallei].
ACCESSION   WP_258007906
VERSION     WP_258007906.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028241.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16931.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..66
                     /product="putative holin"
ORIGIN      
        1 lakraaymli slvmgylaap eiihavpirs tgvaaffaaa lviavtltli ervkgmdlfa
       61 lfrkgd
//
LOCUS       WP_258008007             332 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Tetragenococcus halophilus].
ACCESSION   WP_258008007
VERSION     WP_258008007.1
KEYWORDS    RefSeq.
SOURCE      Tetragenococcus halophilus
  ORGANISM  Tetragenococcus halophilus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Tetragenococcus.
REFERENCE   1  (residues 1 to 332)
  AUTHORS   Todone,F., Vanoni,M.A., Mozzarelli,A., Bolognesi,M., Coda,A.,
            Curti,B. and Mattevi,A.
  TITLE     Active site plasticity in D-amino acid oxidase: a crystallographic
            analysis
  JOURNAL   Biochemistry 36 (19), 5853-5860 (1997)
   PUBMED   9153426
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013434.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01266.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Tetragenococcus halophilus"
                     /db_xref="taxon:51669"
     Protein         1..332
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=35686
     Region          1..109
                     /region_name="COG3976"
                     /note="Uncharacterized conserved protein, contains
                     FMN-binding domain [General function prediction only]"
                     /db_xref="CDD:443175"
     Region          124..>328
                     /region_name="SdhA"
                     /note="Succinate dehydrogenase/fumarate reductase,
                     flavoprotein subunit [Energy production and conversion];
                     COG1053"
                     /db_xref="CDD:440673"
ORIGIN      
        1 mwttiilmvl yegltkgekt mdnkgkidvq akghngpidf elsiddgrvt dleikqhsei
       61 pgifdqvadk lrsdvlenqs faidaisgat vmseailesa dqavknegvq lpekekeqtr
      121 qkeeiqvdiv vigggeaglv aaarlltagk kvallekngy lggatilngs nvtatgskta
      181 krifgeqakk dtpqhlaadv sneslhtndq nltqvmteni geaidfisdf vnlnygkaqt
      241 qtpehsidrq ielpssssye lvkkaaeaft kkggqifldt rvehilqden gkvtgvvaeg
      301 rkrtltvhad aitlstggyg anlnmrgkka kg
//
LOCUS       WP_258008017             170 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase domain-containing protein, partial
            [Tetragenococcus halophilus].
ACCESSION   WP_258008017
VERSION     WP_258008017.1
KEYWORDS    RefSeq.
SOURCE      Tetragenococcus halophilus
  ORGANISM  Tetragenococcus halophilus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Tetragenococcus.
REFERENCE   1  (residues 1 to 170)
  AUTHORS   Xiong,Y. and Eickbush,T.H.
  TITLE     Origin and evolution of retroelements based upon their reverse
            transcriptase sequences
  JOURNAL   EMBO J 9 (10), 3353-3362 (1990)
   PUBMED   1698615
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00078.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Tetragenococcus halophilus"
                     /db_xref="taxon:51669"
     Protein         <1..>170
                     /product="reverse transcriptase domain-containing protein"
     Region          <1..170
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            order(1..5,53..54,83,85..86,132..133)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238828"
     Site            order(1..5,53,85)
                     /site_type="other"
                     /note="putative NTP binding site [chemical binding]"
                     /db_xref="CDD:238828"
     Site            54
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238828"
ORIGIN      
        1 iekyfdtvhh dklistlrer vkdretlhli rvflkagime ngfvrpnetg vpqggplspi
       61 laniylnkld kelearglhf vryaddtdif vkseraanrv mksitswier klflrvnvtk
      121 tkvvrptqsq flgftfwknq kgwqckpskv sktklydktk ailkrkqavs
//
LOCUS       WP_258007896             171 aa            linear   BCT 02-MAR-2025
DEFINITION  TetR/AcrR family transcriptional regulator C-terminal
            domain-containing protein, partial [Burkholderia pseudomallei].
ACCESSION   WP_258007896
VERSION     WP_258007896.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 171)
  AUTHORS   Quinones,B., Pujol,C.J. and Lindow,S.E.
  TITLE     Regulation of AHL production and its contribution to epiphytic
            fitness in Pseudomonas syringae
  JOURNAL   Mol Plant Microbe Interact 17 (5), 521-531 (2004)
   PUBMED   15141956
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025605.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14246.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..171
                     /product="TetR/AcrR family transcriptional regulator
                     C-terminal domain-containing protein"
     Region          50..157
                     /region_name="TetR_C_11"
                     /note="Tetracyclin repressor-like, C-terminal domain;
                     cl23808"
                     /db_xref="CDD:474063"
ORIGIN      
        1 garrrlrrta ratpttrpgp geprepgasr epgaagsnaa aefpdapppv pdslaaivdl
       61 ltgdlytwat sepviamlrl liaesrrapr averwrkhve qafatavgrl vrqgvdagel
      121 rdgiaarapl llvapltqac lrralraapp srrevaasrr dyarfieall t
//
LOCUS       WP_258008027             136 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5655 domain-containing protein, partial [Tetragenococcus
            halophilus].
ACCESSION   WP_258008027
VERSION     WP_258008027.1
KEYWORDS    RefSeq.
SOURCE      Tetragenococcus halophilus
  ORGANISM  Tetragenococcus halophilus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Tetragenococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039496.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18899.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Tetragenococcus halophilus"
                     /db_xref="taxon:51669"
     Protein         <1..136
                     /product="DUF5655 domain-containing protein"
     Region          <25..132
                     /region_name="COG3586"
                     /note="Uncharacterized protein domain, C-terminal to
                     COG1479 DNAse/DNA nickase [General function prediction
                     only]"
                     /db_xref="CDD:442805"
ORIGIN      
        1 kkaiefnagp dlamdypifl cakleliskg neesqalyhs ikqaildwdp niqvtankhy
       61 vsfkrktnfc diaiqkkqvk iwlnakmgdl ddsqnifrdv tnighygngd yevsiqydtn
      121 veyilsvikq awmrgk
//
LOCUS       WP_258008042             192 aa            linear   BCT 02-MAR-2025
DEFINITION  c-type cytochrome, partial [Burkholderia pseudomallei].
ACCESSION   WP_258008042
VERSION     WP_258008042.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024834.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13442.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..192
                     /product="c-type cytochrome"
                     /GO_function="GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
     Region          <1..48
                     /region_name="CytC5"
                     /note="Cytochrome c5 [Energy production and conversion];
                     COG3245"
                     /db_xref="CDD:442476"
     Region          100..189
                     /region_name="CytC5"
                     /note="Cytochrome c5 [Energy production and conversion];
                     COG3245"
                     /db_xref="CDD:442476"
ORIGIN      
        1 wapriaagyd evlhlaltgk gampprggtn pddysdyeia ravvymanqg gakfaepaqp
       61 aanaapasga aaasapgasd aaansqaaaa maaiaalpka geapaagana essasagkal
      121 yestcqacha tgvlnapkfg nkadwaprlk dsmdtvynfa lhgkgamppk ggsnasdadv
      181 kaavdymvna ak
//
LOCUS       WP_258008096            1104 aa            linear   BCT 02-MAR-2025
DEFINITION  LPD7 domain-containing protein [Salmonella enterica].
ACCESSION   WP_258008096
VERSION     WP_258008096.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 1104)
  AUTHORS   Iyer,L.M., Burroughs,A.M., Anand,S., de Souza,R.F. and Aravind,L.
  TITLE     Polyvalent Proteins, a Pervasive Theme in the Intergenomic
            Biological Conflicts of Bacteriophages and Conjugative Elements
  JOURNAL   J Bacteriol 199 (15), e00245-17 (2017)
   PUBMED   28559295
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 1104)
  AUTHORS   Maindola,P., Raina,R., Goyal,P., Atmakuri,K., Ojha,A., Gupta,S.,
            Christie,P.J., Iyer,L.M., Aravind,L. and Arockiasamy,A.
  TITLE     Multiple enzymatic activities of ParB/Srx superfamily mediate
            sexual conflict among conjugative plasmids
  JOURNAL   Nat Commun 5, 5322 (2014)
   PUBMED   25358815
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037421.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18821.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         1..1104
                     /product="LPD7 domain-containing protein"
                     /calculated_mol_wt=124884
     Region          547..626
                     /region_name="LPD7"
                     /note="Large polyvalent protein-associated domain 7;
                     pfam18821"
                     /db_xref="CDD:465879"
ORIGIN      
        1 miipevnlls gnvinprgny tanekyfeaf qeyinqkynl vsprervrvd ptnaadvlsr
       61 ykgddfnnkn refkqqlvrd iidknittrn gfygyvasfg etrirnkgge neyiavklpe
      121 dkkftnlkes ifcddfivhr elkkppldkn viyqrlqewp qrsyelkyvs kasegfrhky
      181 rdsspsekli lleqrkkefy qtyggkngly ptqresnnqr sitetesrrt swvayslqsm
      241 pgsdmatdgk sgftrpplll pgdasfqlgq pestggdsgl rhdlrtgrrg rrddsrpegq
      301 tpsvpgippl ssysgwsgsk yrsglrgima gglnlppyag nprrksttkd veqrsqlllr
      361 rstsdgnwyf sparkqwphr eknasyvaaw flrqseqnqi lpaqkrairs vdsqfftarr
      421 lifqderltr sektqllsvl tferlkahrg itrpeepale eirdmgsedi rklikeksrt
      481 srnsiagdde edksvppagh rfsrivhklk nqiegddihq erqkkltaad lytrrskltk
      541 nvhykdkktd rtlfvdtgta iavrregmss aaltvalela kerfgstlni kgtaefkqqv
      601 idvvakngld ihftskemnr qleerkaela terdgqaieq pgvvpekapm sqdtspvapt
      661 tkqsdeanas dtntdsessd vnvpvdlpfw rtvvhlegkl idhgrapleh qkgnvesyfv
      721 tvrdkdgner thwssdlqdv mkgrrrgqni sleqkesrpv evnvrdehgn saireavrre
      781 wsfsrlpndv vtkesdspvq gskeqatdik tiqegavags qdteledmad lnmiqsgnav
      841 dmilsnpmlr nmamtagqka refnapadek ntvnaqinae iverfkgvdq ereplelils
      901 dtelrgmals meqkmreqaa pldkldavva eingevaarv arlvsvpips stvaatvqtk
      961 dihaknqeke gkpsvakrdk vhegvlvdsg aapykfkpdm nkpeeernds fyvklkmedg
     1021 ktrtlwgvgl envvrdfqng ervklkdkgv epvtwketlk dgrvveksgd rriwegtslt
     1081 reaeimkgfr vsnmehdndg pdia
//
LOCUS       WP_258008107             336 aa            linear   BCT 02-MAR-2025
DEFINITION  PTS sugar transporter subunit IIA, partial [Tetragenococcus
            halophilus].
ACCESSION   WP_258008107
VERSION     WP_258008107.1
KEYWORDS    RefSeq.
SOURCE      Tetragenococcus halophilus
  ORGANISM  Tetragenococcus halophilus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Tetragenococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00359.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Tetragenococcus halophilus"
                     /db_xref="taxon:51669"
     Protein         <1..336
                     /product="PTS sugar transporter subunit IIA"
     Region          <5..315
                     /region_name="BglG"
                     /note="Transcriptional antiterminator [Transcription];
                     COG3711"
                     /db_xref="CDD:442925"
ORIGIN      
        1 sffrkklkse ysdhinaplv isdteifyla lffgshllen nssllrkkdp tavivctngi
       61 svsllmeqtl kgvfpevdfv stmslrefya qdvevdlifs svpldidrry flvkdfltdk
      121 gkmqlrqrvm netvigldet slaekivanv lqqaevddke klffeilkll kdntsenavi
      181 dneanhfdql mpkngliiee nevswheale rlsqplieek miepryltal kqelseippy
      241 ivfrnqlalp htepekgarg vamslgifkk givaktgeti hfivllasnn kekhvdalle
      301 imdlagrdtv lsdllacndk sqvwrllrly rincwg
//
LOCUS       WP_258008108             496 aa            linear   BCT 02-MAR-2025
DEFINITION  glucosaminidase domain-containing protein, partial [Tetragenococcus
            halophilus].
ACCESSION   WP_258008108
VERSION     WP_258008108.1
KEYWORDS    RefSeq.
SOURCE      Tetragenococcus halophilus
  ORGANISM  Tetragenococcus halophilus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Tetragenococcus.
REFERENCE   1  (residues 1 to 496)
  AUTHORS   Nambu,T., Minamino,T., Macnab,R.M. and Kutsukake,K.
  TITLE     Peptidoglycan-hydrolyzing activity of the FlgJ protein, essential
            for flagellar rod formation in Salmonella typhimurium
  JOURNAL   J Bacteriol 181 (5), 1555-1561 (1999)
   PUBMED   10049388
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013954.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01832.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Tetragenococcus halophilus"
                     /db_xref="taxon:51669"
     Protein         1..>496
                     /product="glucosaminidase domain-containing protein"
                     /GO_function="GO:0004040 - amidase activity [Evidence
                     IEA]"
     Region          148..>496
                     /region_name="PRK06347"
                     /note="1,4-beta-N-acetylmuramoylhydrolase"
                     /db_xref="CDD:180536"
ORIGIN      
        1 mrssltrker rkvqermsly gnfkkgaavv gttvtavsmv tpllpldnvf aeeadssvva
       61 syesedgaqd fqsqtddqtv eepsaeaenn vtqdnsveag dveqaeepad nevaydqaqq
      121 fsterensqd qvqpqeegee peedlqqeeq tsedeeqdae aeedlpetpe eeaeqlqeia
      181 gqhpgdqgpa eastfsaqls pepsafieef aahaapvaes nnlyasvmia qavvesgwgs
      241 salsqapnhn lfgikgsyng qsvtmptqey ingryvtvda afrkypsyta sfqdnaalls
      301 tslysgawks ntnsykdata altglyatap dyntvlngii esydltrfds gndggmidtg
      361 tggnentden tgednnsand dnssnsnsst ytvqagdsvw liadqngitm nqlrdwnniq
      421 ndfvypgqel tvskdgssdd snnsngtgns dnnsnssnng sstytvkagd svwliadqng
      481 itmnqlrdwn niqndf
//
LOCUS       WP_258008123             187 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3782 domain-containing protein, partial [Cylindrospermopsis
            raciborskii].
ACCESSION   WP_258008123
VERSION     WP_258008123.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024058.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12644.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         <1..187
                     /product="DUF3782 domain-containing protein"
     Region          <3..163
                     /region_name="COG5493"
                     /note="Uncharacterized protein, contains PD-(D/E)XK
                     nuclease domain [General function prediction only]"
                     /db_xref="CDD:444244"
ORIGIN      
        1 eneqrqrene qrqreyeerq rkheedmeqf rismeetrkm vaetnkhmgs itsrwgefve
       61 nlvrpaavrl fkeqginvhy tslqvkahdy kgsieidiwa endgeivaie vkshlkvrdi
      121 krfikvldrf kdifpkykny rlygavagik vdekadqyal eqglflirpa gdsvaidmke
      181 dfqakvw
//
LOCUS       WP_258008160             478 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase, partial [Cylindrospermopsis raciborskii].
ACCESSION   WP_258008160
VERSION     WP_258008160.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
REFERENCE   1  (residues 1 to 478)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 478)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012234.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00004.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         <1..478
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
     Region          <6..215
                     /region_name="ExeA"
                     /note="Type II secretory pathway ATPase component
                     GspA/ExeA/MshM [Intracellular trafficking, secretion, and
                     vesicular transport, Extracellular structures]; COG3267"
                     /db_xref="CDD:442498"
ORIGIN      
        1 haprqtgktt amlslaqqlt dsgnyaavmv svevgsafnh dpttaelail gawyntiqds
       61 lpqelhppak qwqqeeagsr ikaflrgwak ainlpivlfi deidslqdqt lisvlrqlrd
      121 gfpkrpenfp ssvgliglrd vrdykvasgg sdrlntsspf nikvasltmr nfnlaevgel
      181 yqqhtaatgq iftpeaieta ydltqgqpwl vnalakeive kmvkdrsiai tkehiltake
      241 ilitrqdthl dslaerlrep rikaiiepml aglelgdipn ddiqfvmdlg lckmhpyggl
      301 tianpiyrev lprvltvtpm aslpmiaptw ltsagelnid alltaflkfw rqhgepllgs
      361 tgyheiaphi vlmaflhrvv ngggvlerey aigsdrmdlc lqykdvilgi elkvwrdkkr
      421 dpqgdgieql esylgrlgld fgwlfifdrr knalpmeerl stemvvtenq yritvira
//
LOCUS       WP_258008170             133 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3782 domain-containing protein, partial [Cylindrospermopsis
            raciborskii].
ACCESSION   WP_258008170
VERSION     WP_258008170.1
KEYWORDS    RefSeq.
SOURCE      Cylindrospermopsis raciborskii
  ORGANISM  Cylindrospermopsis raciborskii
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Aphanizomenonaceae; Cylindrospermopsis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024058.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12644.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Cylindrospermopsis raciborskii"
                     /db_xref="taxon:77022"
     Protein         <1..>133
                     /product="DUF3782 domain-containing protein"
     Region          6..>131
                     /region_name="COG5493"
                     /note="Uncharacterized protein, contains PD-(D/E)XK
                     nuclease domain [General function prediction only]"
                     /db_xref="CDD:444244"
ORIGIN      
        1 eyytprtefd ekfdrvlnel qrdreeqark wdeqnrkfda fqaeqaqkwd eqnrkwdeqn
       61 rkwdeqnrkw eentqrldri eaqnsatlee iqkanrryes aigaigsrwg lyseasfrng
      121 lkailgqsfg vev
//
LOCUS       WP_258008223             399 aa            linear   BCT 02-MAR-2025
DEFINITION  HEPN-associated N-terminal domain-containing protein [Pseudomonas
            putida].
ACCESSION   WP_258008223
VERSION     WP_258008223.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas putida
  ORGANISM  Pseudomonas putida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 399)
  AUTHORS   Anantharaman,V., Makarova,K.S., Burroughs,A.M., Koonin,E.V. and
            Aravind,L.
  TITLE     Comprehensive analysis of the HEPN superfamily: identification of
            novel roles in intra-genomic conflicts, defense, pathogenesis and
            RNA processing
  JOURNAL   Biol Direct 8, 15 (2013)
   PUBMED   23768067
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037931.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18870.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Pseudomonas putida"
                     /db_xref="taxon:303"
     Protein         1..399
                     /product="HEPN-associated N-terminal domain-containing
                     protein"
                     /calculated_mol_wt=45236
     Region          30..151
                     /region_name="HEPN_RES_NTD1"
                     /note="HEPN/RES N-terminal domain 1; pfam18870"
                     /db_xref="CDD:436794"
     Region          191..375
                     /region_name="RES"
                     /note="RES domain; pfam08808"
                     /db_xref="CDD:400937"
ORIGIN      
        1 mergyslvdd tyvcarcved eslqrivrrn wskgicsycn ktrrvadmnh viehvyksil
       61 lewgdaaneg layetreggw qgnvcstwel iynsgpdcpe evldtiagsi hdvpwceidp
      121 yslpidrtlv ygwqsfsrfi ihtarfvfyk avntsyaadq hdemnpvdil eaigsvakkl
      181 qlistvpagq pifrvrivep evdlrrasel gpppaeyanm pnrmspvgip mfygafdlat
      241 avretydfsd ksakkaatga fsavrdlrvv dlsesffvps lfdpelqslr pyyrfmrdfi
      301 edftkpiers drahaeyvpt qvvteyfrhv yrtdddrqid giiypssktg dkalvifada
      361 sgcidaedlp sertllrldk afdvdlsgfd tphdddeif
//
LOCUS       WP_258008293             118 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: transposase [unclassified Stenotrophomonas].
ACCESSION   WP_258008293
VERSION     WP_258008293.1
KEYWORDS    RefSeq.
SOURCE      unclassified Stenotrophomonas
  ORGANISM  unclassified Stenotrophomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024172.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12762.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="unclassified Stenotrophomonas"
                     /db_xref="taxon:196198"
     Protein         1..118
                     /product="transposase"
                     /calculated_mol_wt=13280
     Region          <3..81
                     /region_name="transpos_IS1595"
                     /note="IS1595 family transposase; NF033547"
                     /db_xref="CDD:468078"
ORIGIN      
        1 mqpesdvysd glgafrvlen ehahtvtqas gnigceqpna rwvnvvlsnl kraldgtyha
       61 frfckyahry laeaqwrsnr rfdlsalvpr plraaaritp wpertlrdvp vfpaeasc
//
LOCUS       WP_258008296             655 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258008296
VERSION     WP_258008296.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 655)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..>655
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..187
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
     Region          224..635
                     /region_name="E-C_NRPS"
                     /note="Dual Epimerization/Condensation (E/C) domains of
                     nonribosomal peptide synthetases (NRPSs); cd19544"
                     /db_xref="CDD:380466"
ORIGIN      
        1 frielgeiea qlakvagvre tvalardsgs pagekrlvay ytgnadvaal reqatrhlpa
       61 ymvpsayvrl dawpltpngk ldrralpapa ddayaraeye apqgakeeal aaiwkdllpv
      121 erisrhdnff elgghsllvi glseklraag lhadvrvvyr astladlaah lgtdnqdiri
      181 ppnliadgde hitpaqltlv alsqesidal vtkveggaan vqdiyplapl qegilfhhlm
      241 sgesdpyvls gvlafrsrev merfvsalqq vidrhdilrt gffwegleqp vqvvqrratl
      301 pvsvveldar egdivrqlea rfdsrgyrmd vsraplmhvh aacdgeherw varvlfhhls
      361 idhttlervi eearaigqgr aedlprpvpf rnfvaqarlg vseadheayf raklgdidep
      421 tapfgllsvq gdgreiaeaa rrlkpelsga lrgharrlgv saasmmhvaw glvlsrttgr
      481 qdvvfgtvlf grmqggaqsd rslglfintl pvrmrvaqtg vetsvketha qlaelmrheh
      541 aplvlaqrcs gvpaqtplft sllnyryskp kvaaahiadg ielldghert syplsmtvdd
      601 herdftivak vcerigpqrv celmelaleq ltralsanpg gelaeldvlp aaert
//
LOCUS       WP_258008299             105 aa            linear   BCT 02-MAR-2025
DEFINITION  ShlB/FhaC/HecB family hemolysin secretion/activation protein
            [Burkholderia pseudomallei].
ACCESSION   WP_258008299
VERSION     WP_258008299.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 105)
  AUTHORS   Desvaux,M., Parham,N.J. and Henderson,I.R.
  TITLE     Type V protein secretion: simplicity gone awry?
  JOURNAL   Curr Issues Mol Biol 6 (2), 111-124 (2004)
   PUBMED   15119822
REFERENCE   2  (residues 1 to 105)
  AUTHORS   Walker,G., Hertle,R. and Braun,V.
  TITLE     Activation of Serratia marcescens hemolysin through a
            conformational change
  JOURNAL   Infect Immun 72 (1), 611-614 (2004)
   PUBMED   14688146
REFERENCE   3  (residues 1 to 105)
  AUTHORS   Jacob-Dubuisson,F., Locht,C. and Antoine,R.
  TITLE     Two-partner secretion in Gram-negative bacteria: a thrifty,
            specific pathway for large virulence proteins
  JOURNAL   Mol Microbiol 40 (2), 306-313 (2001)
   PUBMED   11309114
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03865.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..105
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /calculated_mol_wt=11144
     Region          <2..104
                     /region_name="FhaC"
                     /note="Hemolysin activation/secretion protein
                     [Intracellular trafficking, secretion, and vesicular
                     transport]; COG2831"
                     /db_xref="CDD:442079"
ORIGIN      
        1 mrgfdgetml agargfywrn elqapigqtg mavyagldyg rvwgpqpval vgtqlaggvi
       61 gvkgsvmtrf ggygydlfag tpvykpsgfp tnrvtlgfql taqfw
//
LOCUS       WP_258008308             182 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258008308
VERSION     WP_258008308.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 182)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..182
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <1..171
                     /region_name="PRK07092"
                     /note="benzoylformate decarboxylase; Reviewed"
                     /db_xref="CDD:235931"
ORIGIN      
        1 pgapgermpv afalqtladv rgsrdvvvee apsarpamhe hlpfssadtf ytmdsgglgy
       61 gmpaalgial gspgrrvial igdgsslysi qalwsavhlk lpvtfvilnn aryaalqdfa
      121 pvfgfrdgep vqgtalpgld fvslargfgc dgvrvsdaar lrdalerala spvpvvvgvd
      181 va
//
LOCUS       WP_258008312             501 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258008312
VERSION     WP_258008312.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 501)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>501
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          65..486
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mrarafhsvi spyhirlplr ririireyvn ttqeygvmtd mldsseisvr ddidpvpgaa
       61 pervlaltag qygiwldqml npdlpcyilg ailridgtfd ealltsvvne vvnandslra
      121 mlvseggsvr qrvlsdvele iahidfsgsa hphdsawrym rtafdtafal dgllcdfriv
      181 respsrtywm yrchhlvadg qsvsmicrmi vdlynrrasa dmarieptps yfdsldddrk
      241 yaessryerd aqfwqdkfss lpppllssrs seaaarpasf pdgqvnltie rakydrlgri
      301 aeasgctivh vmfgvlalyf srayqvdevv igmpvhnrst aqqkraigmf asvvpiripv
      361 dgnerfvsll ngvsaelrhc yrhqrfpiae lnrrlglvrt grrqlfdltl sfekfpldfy
      421 igdvklglts mrhrfeqtpi tvnvqdyhed qdlvmqfnyd vnafshaevd nigtriggll
      481 daliehhddm pvgmlpllde a
//
LOCUS       WP_258008317             314 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258008317
VERSION     WP_258008317.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024603.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13205.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..314
                     /product="Ig-like domain-containing protein"
     Region          <39..119
                     /region_name="Big_5"
                     /note="Bacterial Ig-like domain; pfam13205"
                     /db_xref="CDD:463809"
     Region          <217..285
                     /region_name="COG5533"
                     /note="Ubiquitin C-terminal hydrolase [Posttranslational
                     modification, protein turnover, chaperones]"
                     /db_xref="CDD:444284"
ORIGIN      
        1 aaaspsapst atpnappaap pavvatrvpp thaalrrpti elefdraiep gsvphivlra
       61 ddgtsvavgp lswlsdrria faprkplksn sryeimvpag irsttgersa hpltssfdta
      121 pvtpprglpn ldgascfint alqlavhssa lddilsndav ppavrtlled ydaasadald
      181 aqlaaavaal rerlripgge agpvqealke mgmplhetfd vsdihsapag tkafilnssy
      241 dyaalpnhdr lvafsyytgg hylayvkrdg iwysvddarv sevseqqlrd ltplfhhptn
      301 sdvsgaaiei aiyr
//
LOCUS       WP_258008323             479 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258008323
VERSION     WP_258008323.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 479)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..>479
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <2..>479
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
ORIGIN      
        1 paggaraars lppradlara radgafdylg riddqvqvrg vrvepaeiaa cllthpgvrd
       61 agvlaetagg rtqliacval aappretpsg gdargdappd ddalrahvaa hlppawlphr
      121 fvrfdklpyt lngkldrval rdavaarpae aaadvdaprt dterrvaalw qrllndpapi
      181 grvdrffarg gdslaamqlq tairldwrvn lrldtlfdda plaelaarid aaerearqpa
      241 aigttarrai aadaidarat gqmgrtgaag eateateaag alerpasfaq qrfwvlartq
      301 dagaayhvsf hwdidgaldl gtlqraldml iarheawrtt lvenddgvvl qrihaalpvr
      361 iaavdlrgea gasraarlae lterhagapf dlsdgplvra llvtladgaq rflltthhav
      421 sdgwssrcaf aeltaayaal aegrapelpa lpiqyadyaq wqrdaldahe tarelaywr
//
LOCUS       WP_258008340             544 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258008340
VERSION     WP_258008340.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 544)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>544
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          110..523
                     /region_name="E-C_NRPS"
                     /note="Dual Epimerization/Condensation (E/C) domains of
                     nonribosomal peptide synthetases (NRPSs); cd19544"
                     /db_xref="CDD:380466"
ORIGIN      
        1 mtandllall nskgialsvk gdnlaitgde kvledpglla llrankpali dlikdghgtv
       61 ggavrvppnr ipadaeriap eqltlvrldq geidalvarv dggaanvqdi yplvpmqegm
      121 lfhhllsqqg daylesylla frtrerldrf lsalqqvidr hdilrtaffw eglphsvqvv
      181 qrratlplnv veldprdgdv gqqlearydp rshridvgra plmqvhaahd aaggrwlvrl
      241 lshhlavdht tlervieear aieqgrvedl prpvpfrnfv aqarlgvsea dheayfrakl
      301 gdideptapf gllsvqgdgr eiaeaartlk pelsgalrgh arrlgvsaas mmhvawglvl
      361 srttgrqdvv fgtvlfgrmq ggaqsdralg lfintlpvrm rvaqtgveas vkethaqlae
      421 lmrhehaplv laqrcsgvpa qtplftslln yryglrhrad aatpggddie llsarertny
      481 pltlsvddlg qdfsltvqvs ghvdpqrvca fmetaleqla qalgeqpqcd iggldvlprs
      541 ereq
//
LOCUS       WP_258008354             154 aa            linear   BCT 02-MAR-2025
DEFINITION  phospholipase D-like domain-containing protein, partial
            [Pseudomonas syringae].
ACCESSION   WP_258008354
VERSION     WP_258008354.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13091.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         <1..154
                     /product="phospholipase D-like domain-containing protein"
     Region          <29..83
                     /region_name="PLDc_SF"
                     /note="Catalytic domain of phospholipase D superfamily
                     proteins; cl15239"
                     /db_xref="CDD:472788"
     Site            order(52,54,67,69,80)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197204"
     Site            52
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197204"
ORIGIN      
        1 ldewqaeidr ktkeiedtkl elepvtglki hvcslvafds pagepwmpvy ihsklmivdd
       61 vytthgsani ntrsmmvdse lnichehpef sqplrrrlwd lhtkgqgvqd dpeeafmawd
      121 kiikrnkdfq nnklkpeapl vefyyaetsm tdfd
//
LOCUS       WP_258008395             167 aa            linear   BCT 02-MAR-2025
DEFINITION  DDE-type integrase/transposase/recombinase, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258008395
VERSION     WP_258008395.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 167)
  AUTHORS   Dyda,F., Hickman,A.B., Jenkins,T.M., Engelman,A., Craigie,R. and
            Davies,D.R.
  TITLE     Crystal structure of the catalytic domain of HIV-1 integrase:
            similarity to other polynucleotidyl transferases
  JOURNAL   Science 266 (5193), 1981-1986 (1994)
   PUBMED   7801124
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012870.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00665.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>167
                     /product="DDE-type integrase/transposase/recombinase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <8..>167
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 myspmerral ieespsfgyr tlahllgfnk ntvqrifrlm gwqvrmrpig frprvqamps
       61 vatapnergs tdmcrvwagr dgwvtlarvi dchtrellgw hlsrsgrast assalehali
      121 arfgtlgrvp kpfllrgdng lvftsrdyta lvrsyglrqa fitphcp
//
LOCUS       WP_258008449             401 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1254 domain-containing protein, partial [Rhodococcus sp.
            ENV425].
ACCESSION   WP_258008449
VERSION     WP_258008449.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018561.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06863.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         1..>401
                     /product="DUF1254 domain-containing protein"
     Region          33..401
                     /region_name="COG5361"
                     /note="Uncharacterized conserved protein [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:444136"
ORIGIN      
        1 mtdttatpip agiespdevh trlgtlrffd gfpddatvrt lfdnldfqra vqayllalpa
       61 lnmaamrsal lewgpvnsta yvfedlmhpr tvwltantst sytaiwidlr dgplvieapp
      121 gvlgaiddsw grwvvdvglt gpdkgrggay lllppgydge vpggyfvvrt nsfgmvlfvr
      181 gfldehgdph pavevikdkt rayplalagr ppsmrfvnvs pepmvgvppa dfrawemlde
      241 vvqseppess dpltlgffas igirrgtpld pdermrailt eaaavgdatg raltyrfrqp
      301 eayrypgstw rafflgghrf eedgvallda aaqfnfsvtg vspaedveri gtgsqyvvac
      361 vdadgapfdg grtyrlrvpa nvpagnfwsi laydtqtrsm l
//
LOCUS       WP_258008455             142 aa            linear   BCT 02-MAR-2025
DEFINITION  prolipoprotein diacylglyceryl transferase family protein, partial
            [Rhodococcus sp. ENV425].
ACCESSION   WP_258008455
VERSION     WP_258008455.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013915.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01790.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         <1..142
                     /product="prolipoprotein diacylglyceryl transferase family
                     protein"
                     /EC_number="2.4.99.-"
                     /GO_component="GO:0005886 - plasma membrane [Evidence
                     IEA]"
                     /GO_function="GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA]"
                     /GO_process="GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
     Region          <1..>141
                     /region_name="LGT"
                     /note="Prolipoprotein diacylglyceryl transferase; cl00478"
                     /db_xref="CDD:469786"
ORIGIN      
        1 iyerrndagl tspdlidgis tgqvaavvhp tflyelvwnl lvvlllvlvd rrfrighgrl
       61 falyvagysa grffvelmrs dpateiagir insftsaivf vlavayvvla rkgredpedl
      121 kaprvlpqsr dasrkttdts ap
//
LOCUS       WP_258008497             446 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein, partial [Rhodococcus sp.
            ENV425].
ACCESSION   WP_258008497
VERSION     WP_258008497.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 446)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 446)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 446)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         <1..446
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
     Region          <16..77
                     /region_name="CaiA"
                     /note="Acyl-CoA dehydrogenase related to the alkylation
                     response protein AidB [Lipid transport and metabolism];
                     COG1960"
                     /db_xref="CDD:441563"
     Region          82..437
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(155,185,187,218,220,419..421,423,425)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 deaslaaava gatapeaafa vakdciqilg gigytwehda hlylrraqsl rillgstasw
       61 rrrvtdltrr garrvlgidl ppeaeqirtg vrdelapavd lgggertryl aekgytaphl
      121 papwgkgada vtqlviaeel raanltphdm iignwvvptl iahgspeqqr rfvppslrge
      181 ivwcqlfsep gagsdlaslt tkatkvdggw vlqgqkvwts mardahwgic lartdasvpk
      241 hkglsyflvd mrssegldir plreitgeal fneifidnvf vpddclvgep gdgwklartt
      301 lanervslsh dsslgsggea llelaaglpg glddeqattl gkvlcdaqtg glmglrttlr
      361 slagaqpgae ssvakllgve hiqqvwevam dwagprallg gqhrrsatqm flnsqcmsia
      421 ggttnvqlni igerllglpr dpepgk
//
LOCUS       WP_258008514             340 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Rhodococcus sp. ENV425].
ACCESSION   WP_258008514
VERSION     WP_258008514.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 340)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         <1..>340
                     /product="AMP-binding protein"
     Region          1..>340
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Region          <66..>116
                     /region_name="PRK03640"
                     /note="o-succinylbenzoate--CoA ligase"
                     /db_xref="CDD:235146"
     Site            order(103,106..111,113..114)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
ORIGIN      
        1 vprgecwpla vwavartgaa wvsvdpaqpp arvetvlrds gatvgltvag aepvgegiaw
       61 vdltgewear eipepqtypd dtaaephpdd tvaephpddt ayliytsgst gtpkgvavph
      121 rgltavvdaq rhvlgvapgs rvlhaashtf dasvfellaa hahgatlvva pdhvyagaal
      181 qrlivdehvt hvvatptvla tldpdtlgrp vtvlsegeal tapvverwrr hrllngygpt
      241 eftiavsfgg pfdpgarptv gapvagatah ildarlhpvp agvigelyvt gaglargyhg
      301 rsgltatrfv adphgepgar lyrtgdlarv tadgeldvlg
//
LOCUS       WP_258008521             157 aa            linear   BCT 02-MAR-2025
DEFINITION  pyridoxal-phosphate dependent enzyme, partial [Rhodococcus sp.
            ENV425].
ACCESSION   WP_258008521
VERSION     WP_258008521.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012512.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00291.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         1..>157
                     /product="pyridoxal-phosphate dependent enzyme"
     Region          7..>157
                     /region_name="COG1350"
                     /note="Predicted alternative tryptophan synthase
                     beta-subunit (paralog of TrpB) [Amino acid transport and
                     metabolism]"
                     /db_xref="CDD:440961"
ORIGIN      
        1 mpelvsipth wyniagdlpd appphlhpgt repvtaadle plfaaglieq elstetdiai
       61 pepvreayat yrttpllrar sferalgtpa riyvkyegvs pvgshktnsa laqayynsld
      121 gvkklttetg agqwgsalsf acakfgidle vwqvras
//
LOCUS       WP_258008556             163 aa            linear   BCT 02-MAR-2025
DEFINITION  histidine phosphatase family protein, partial [Rhodococcus sp.
            ENV425].
ACCESSION   WP_258008556
VERSION     WP_258008556.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 163)
  AUTHORS   Rigden,D.J.
  TITLE     The histidine phosphatase superfamily: structure and function
  JOURNAL   Biochem J 409 (2), 333-348 (2008)
   PUBMED   18092946
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012521.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00300.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         <1..163
                     /product="histidine phosphatase family protein"
     Region          <1..163
                     /region_name="PRK07238"
                     /note="bifunctional RNase H/acid phosphatase; Provisional"
                     /db_xref="CDD:180903"
ORIGIN      
        1 aarrigergn vaavvssplg raretadaaa salglpvtvh eglietdfgk wegltfleaa
       61 qrdpdlhrrw lgdtsvrppg gesfdevrgr latvrddlva eygganvlvv shvtpiktll
      121 qmaldagpsl lyrlhldlas lsiaefypdg gaavrlvndt shl
//
LOCUS       WP_258008559             182 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase-like protein, partial [Rhodococcus sp.
            ENV425].
ACCESSION   WP_258008559
VERSION     WP_258008559.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024848.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13456.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         1..>182
                     /product="reverse transcriptase-like protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
     Region          3..>182
                     /region_name="PRK07238"
                     /note="bifunctional RNase H/acid phosphatase; Provisional"
                     /db_xref="CDD:180903"
ORIGIN      
        1 msrvvveadg gsrgnpgpag ygavvfgadh eavlaersas igratnnvae yqgliaglta
       61 aaelgadevd vrmdsklvve qmsgrwkikh pdmiplaara relargfsrv eftwvpraen
      121 ayadrlanea mdaaasvasg sesasptpes aappvkspgw tgavgtptrm lllrhgqtpl
      181 sv
//
LOCUS       WP_258008563             169 aa            linear   BCT 02-MAR-2025
DEFINITION  TOBE domain-containing protein, partial [Rhodococcus sp. ENV425].
ACCESSION   WP_258008563
VERSION     WP_258008563.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 169)
  AUTHORS   Koonin,E.V., Wolf,Y.I. and Aravind,L.
  TITLE     Protein fold recognition using sequence profiles and its
            application in structural genomics
  JOURNAL   Adv Protein Chem 54, 245-275 (2000)
   PUBMED   10829230
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019998.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08402.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         <1..169
                     /product="TOBE domain-containing protein"
                     /GO_component="GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <1..167
                     /region_name="MalK"
                     /note="ABC-type sugar transport system, ATPase component
                     MalK [Carbohydrate transport and metabolism]; COG3839"
                     /db_xref="CDD:443050"
ORIGIN      
        1 vthdqveamt mgdrvavlrg gtlqqfsspt elydrpanaf vagfigspam nlldarivdg
       61 gvqigstvvd verdriaslh ragletvtvg irpeqleitd gdgveaivdl veelgsesyv
      121 ytrvarsdtt lvarsltrtp arladtirlr kregsvhlfh petgervgd
//
LOCUS       WP_258008571             547 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258008571
VERSION     WP_258008571.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 547)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>547
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          99..520
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 msrrpgaada arrrkragar cfaaitahes krsaaharaf hsvispyhir lplrrvriir
       61 eyvnttqeyg vmtdmldsse isvrddidpv pgaapervla ltagqygiwl dqmlnpdlpc
      121 yilgailrid gtfdeallts vvnevvnand slramlvseg gsvrqrvlsd veleiahidf
      181 sgsahphdsa wrymrtafdt afaldgllcd frivrespsr tywmyrchhl vadgqsvsmi
      241 crmivdlynr rtsadmarie ptpsyfdsld ddrkyaessr yerdaqfwqd kfsslpppll
      301 ssrsseaaar pasfpdgqvn ltierakydr lgriaeasgc tivhvmfgvl alyfsrafqv
      361 devvigmpvh nrstaqqkra igmfasvvpi ripvdgnerf vsllngvsae lrhcyrhqrf
      421 piaelnrrlg lvrtgrrqlf dltlsfekfp ldfyigdvkl gltsmrhrfe qtpitvnvqd
      481 yhedqdlvmq fnydvnafsh aevdnigtri gglldalieh hddmpvgmlp lldeaerkqv
      541 vyawnat
//
LOCUS       WP_258008640             296 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Rhodococcus sp. ENV425].
ACCESSION   WP_258008640
VERSION     WP_258008640.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         <1..296
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <3..240
                     /region_name="AraJ"
                     /note="Predicted arabinose efflux permease AraJ, MFS
                     family [Carbohydrate transport and metabolism]; COG2814"
                     /db_xref="CDD:442063"
ORIGIN      
        1 vtfaqspgll avgvvlagsa ggwvwapysd ivtrsvpsrq qpralaiitt gtsgglvllg
       61 alavlaavgs wrlvwvgial aavaaalvnl rlvprtgsap rpegragass lvaalrvpaa
      121 ysvvyfavvv vyftyaadvl dsgtfpaaav palyaalglt gmvgvatgtl aqrlgsvrva
      181 alclatvgaa lvllglaggs vattapstgi fgmgymtgsa vlavwtaelv peragaafta
      241 clvvgalssv aarrcrdtrp rsgvaalvta avsllsaval mlygfshgaa vgdigr
//
LOCUS       WP_258008646             500 aa            linear   BCT 02-MAR-2025
DEFINITION  FHA domain-containing protein, partial [Rhodococcus sp. ENV425].
ACCESSION   WP_258008646
VERSION     WP_258008646.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 500)
  AUTHORS   Pallen,M., Chaudhuri,R. and Khan,A.
  TITLE     Bacterial FHA domains: neglected players in the phospho-threonine
            signalling game?
  JOURNAL   Trends Microbiol 10 (12), 556-563 (2002)
   PUBMED   12564991
REFERENCE   2  (residues 1 to 500)
  AUTHORS   Durocher,D., Henckel,J., Fersht,A.R. and Jackson,S.P.
  TITLE     The FHA domain is a modular phosphopeptide recognition motif
  JOURNAL   Mol Cell 4 (3), 387-394 (1999)
   PUBMED   10518219
REFERENCE   3  (residues 1 to 500)
  AUTHORS   Hofmann,K. and Bucher,P.
  TITLE     The FHA domain: a putative nuclear signalling domain found in
            protein kinases and transcription factors
  JOURNAL   Trends Biochem Sci 20 (9), 347-349 (1995)
   PUBMED   7482699
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012708.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00498.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         1..>500
                     /product="FHA domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
     Region          24..102
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cl00062"
                     /db_xref="CDD:469597"
     Site            order(31..32,46..47,49,67..68)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:438714"
     Region          <141..215
                     /region_name="FHA"
                     /note="Forkhead associated (FHA) domain, binds pSer, pThr,
                     pTyr [Signal transduction mechanisms]; COG1716"
                     /db_xref="CDD:441322"
     Region          230..447
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            264..271
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213179"
     Site            order(267..268,270..272,311,390..391,423)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:213179"
     Site            308..311
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213179"
     Site            366..375
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213179"
     Site            386..391
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213179"
     Site            394..397
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213179"
     Site            419..425
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213179"
ORIGIN      
        1 mddletrhaq vllewddgra gygpgatvri grdrsmdvtl dhpvvsreha flhwdegwyl
       61 vdsgsknglf vdgrrvervr vtgtvvarlg draegpdlri svaepeatre rrwglldqlt
      121 avragdtrgp lrrprpaprp gdvsigraad navvvpdvla srqhaalrtg psgleiedlg
      181 svngtfvagt ritraalteg dvvtigntdl vvrdgtlvpr ekvaapatgg lrvravglti
      241 dgnrrllhdv tlaappgtlt avigpsgagk stvakivsgt gnptdgvvef dghsvhaeyq
      301 alrsriglvp qddvlhrqlt vrealgyaae lrlppdttra drdeviarvl aelqltehag
      361 trvdrlsggq rkrasvalel ltgpsllild eptsgldpal drqimttlrr ladsgrvvlv
      421 ithslsylel cdqvlllapg gktayvgppg evgaalgstd waeifarvaa epdevhaehl
      481 arsaavdhpp aaapgplgrp
//
LOCUS       WP_258008735             540 aa            linear   BCT 02-MAR-2025
DEFINITION  Zn-binding domain-containing protein, partial [Rhodococcus sp.
            ENV425].
ACCESSION   WP_258008735
VERSION     WP_258008735.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 540)
  AUTHORS   Roske,J.J., Liu,S., Loll,B., Neu,U. and Wahl,M.C.
  TITLE     A skipping rope translocation mechanism in a widespread family of
            DNA repair helicases
  JOURNAL   Nucleic Acids Res 49 (1), 504-518 (2021)
   PUBMED   33300032
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020926.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09369.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         <1..540
                     /product="Zn-binding domain-containing protein"
     Region          <1..539
                     /region_name="DECH_helic"
                     /note="helicase/secretion neighborhood putative DEAH-box
                     helicase; TIGR03817"
                     /db_xref="CDD:274800"
ORIGIN      
        1 attadpgaaa srlvgapcre vtedgsphgp rtvalweppl leqvtgenga pvrraagtea
       61 ariladlvve gartlafvrs rrgaeltalg aqrllaeaap elvdrvaayr agylaeerre
      121 leaaladgrl lgaastnale lgmdiaglda vvvagfpgtv asfwqqagra grrgagslvv
      181 lvarddpldt ylvhhpaall dkpveatvtd ptnpyvlgpq llcaalelpl tdaeveefga
      241 advlaalaaq gairrrphgw fvtpdtrphs didirggigt qiaivesdtg rmlgtvdggr
      301 apatvhpgav ylhrgesfvv delhlddgia lvhaedpews tsareitdiv vtavaeqrsl
      361 gpvtvglvev evthqvvsyl rrlpsgevld stdldmpsqc lptravmytv tpelldrcgi
      421 gpervpgalh aaehaaigll plvatcdrwd iggvstavhp dtglptvfvy dghpggagfa
      481 drgyariaew lgatraavta cecaagcpsc vyspkcgngn dpldkagava llgavldtla
//
LOCUS       WP_258008745             127 aa            linear   BCT 02-MAR-2025
DEFINITION  protein kinase domain-containing protein, partial [Rhodococcus sp.
            ENV425].
ACCESSION   WP_258008745
VERSION     WP_258008745.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 127)
  AUTHORS   Hunter,T. and Plowman,G.D.
  TITLE     The protein kinases of budding yeast: six score and more
  JOURNAL   Trends Biochem Sci 22 (1), 18-22 (1997)
   PUBMED   9020587
REFERENCE   2  (residues 1 to 127)
  AUTHORS   Hanks,S.K. and Hunter,T.
  TITLE     Protein kinases 6. The eukaryotic protein kinase superfamily:
            kinase (catalytic) domain structure and classification
  JOURNAL   FASEB J 9 (8), 576-596 (1995)
   PUBMED   7768349
REFERENCE   3  (residues 1 to 127)
  AUTHORS   Hanks,S.K. and Quinn,A.M.
  TITLE     Protein kinase catalytic domain sequence database: identification
            of conserved features of primary structure and classification of
            family members
  JOURNAL   Methods Enzymol 200, 38-62 (1991)
   PUBMED   1956325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00069.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         <1..>127
                     /product="protein kinase domain-containing protein"
                     /GO_function="GO:0004672 - protein kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006468 - protein phosphorylation
                     [Evidence IEA]"
     Region          <1..126
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 hrdvkpanil iseygepqlt dfgiarlsdr qdttrglvvg spaytapell hgqspsvasd
       61 vyglgatlft alagrpayar rrgeelvaql lristepipd lrerdvpegv cavieqamar
      121 epahrfg
//
LOCUS       WP_258008746             125 aa            linear   BCT 02-MAR-2025
DEFINITION  protein kinase domain-containing protein, partial [Rhodococcus sp.
            ENV425].
ACCESSION   WP_258008746
VERSION     WP_258008746.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 125)
  AUTHORS   Hunter,T. and Plowman,G.D.
  TITLE     The protein kinases of budding yeast: six score and more
  JOURNAL   Trends Biochem Sci 22 (1), 18-22 (1997)
   PUBMED   9020587
REFERENCE   2  (residues 1 to 125)
  AUTHORS   Hanks,S.K. and Hunter,T.
  TITLE     Protein kinases 6. The eukaryotic protein kinase superfamily:
            kinase (catalytic) domain structure and classification
  JOURNAL   FASEB J 9 (8), 576-596 (1995)
   PUBMED   7768349
REFERENCE   3  (residues 1 to 125)
  AUTHORS   Hanks,S.K. and Quinn,A.M.
  TITLE     Protein kinase catalytic domain sequence database: identification
            of conserved features of primary structure and classification of
            family members
  JOURNAL   Methods Enzymol 200, 38-62 (1991)
   PUBMED   1956325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00069.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         1..>125
                     /product="protein kinase domain-containing protein"
                     /GO_function="GO:0004672 - protein kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006468 - protein phosphorylation
                     [Evidence IEA]"
     Region          10..>125
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 msaagfvepr vagqggfgiv yrcrqpaldr vvavkvmsps pdetdrvrfl reqqamgrls
       61 ghpnivhvle agvtrtgrpy ivmpfhrrds leawinrrga rtvaevldig ikmagaleta
      121 hragv
//
LOCUS       WP_258008750             486 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein, partial [Rhodococcus sp.
            ENV425].
ACCESSION   WP_258008750
VERSION     WP_258008750.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 486)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         1..>486
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          50..>485
                     /region_name="UvrD"
                     /note="Superfamily I DNA or RNA helicase [Replication,
                     recombination and repair]; COG0210"
                     /db_xref="CDD:439980"
ORIGIN      
        1 mtdadirpda rprqaevrlv prpdeappqr qwpedvqrvf adsppmpqwr pwqvlggpgt
       61 gktallvdla vsriaagadp esvlvlthsr raatevreai tagllrvgav pggpratrep
      121 lvrtvhsyaf avlrlqasth gnppprlitg aeqdavlrel lrgdlddgag mwperlrpal
      181 gmtgfavelr dlmlranerg lgpedlielg qrrsrpewva vgefaaryeq imllrgavgi
      241 eapeatapal daaelvgaal aafvtdpdll arertrirhl lvddaqhldp qaaqlvrvvg
      301 lgtrtttvag dpdqavftfr gadpaflaal vdddpsrrvv lgtnhraape vaelvgritr
      361 rlsglpphrg apavpsddpg tvrvrvlptp akeaalvadt lrrahlvdgv pwsrmavvvr
      421 svprslaplr rallaagvpv ttaaselpla rqhgvaglll vlralsglpf ggeealalls
      481 gpvgga
//
LOCUS       WP_258008755             274 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme, partial [Rhodococcus sp. ENV425].
ACCESSION   WP_258008755
VERSION     WP_258008755.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 274)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 274)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         <1..>274
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          3..>273
                     /region_name="ARO8"
                     /note="DNA-binding transcriptional regulator, MocR family,
                     contains an aminotransferase domain [Transcription, Amino
                     acid transport and metabolism]; COG1167"
                     /db_xref="CDD:440781"
ORIGIN      
        1 fvaapdgrqp wgtalgapvp gvldlgnaap easslltaay avaqtrlpdl laghgyapsg
       61 lpelraavaa rytarglptd peqvlitaaa adgldavlht vvgagrrvlh qhpshpgale
      121 tiaatgaqsv avpvdvddpd vivdeadraa rqhaptvayl mpdhanptgv slsvaarrsl
      181 aatlwrhrvl tvvdevaael sfagddiepf gaavpdaatv hvgslskvvw ggirigwvrg
      241 dratvarvre vllrrqlgvs ildqlaavel faqw
//
LOCUS       WP_258008756             469 aa            linear   BCT 02-MAR-2025
DEFINITION  PD-(D/E)XK nuclease family protein, partial [Rhodococcus sp.
            ENV425].
ACCESSION   WP_258008756
VERSION     WP_258008756.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 469)
  AUTHORS   Kinch,L.N., Ginalski,K., Rychlewski,L. and Grishin,N.V.
  TITLE     Identification of novel restriction endonuclease-like fold families
            among hypothetical proteins
  JOURNAL   Nucleic Acids Res 33 (11), 3598-3605 (2005)
   PUBMED   15972856
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024117.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12705.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         <1..>469
                     /product="PD-(D/E)XK nuclease family protein"
     Region          <32..331
                     /region_name="UvrD"
                     /note="Superfamily I DNA or RNA helicase [Replication,
                     recombination and repair]; COG0210"
                     /db_xref="CDD:439980"
     Region          351..>465
                     /region_name="Slr0479"
                     /note="RecB family exonuclease [Replication, recombination
                     and repair]; COG2887"
                     /db_xref="CDD:442133"
ORIGIN      
        1 rrvelaaggd rdsaellrll lvddegenae rlergltdve aaplkkaqav lrkareaarr
       61 gggiedvlwe awqatglerk waaaserggp vgaqadrdld givalfdaaa dyvdrlpraq
      121 lagfvdylte qeipgtvrtr lvapaeavtv vsahsaagre wdvvavagvq eglwpslrar
      181 gtllgietli davsgadggg dgstrlsrta plladerrlf lvacsrarrt llvtavesvg
      241 gdtdmvrsrf vdelvgadsd dvvdeagedv svlpeetrtr vlalptlvae lrsvvcdpvv
      301 arddpqrqrr aaaqlarlar arvrgahpdq wygtaepstq qelwdpgada vplspstveq
      361 lttcplrwmf erhggsdgdn thavagslvh tlvqalagri ppdqverale rawdsvdlgs
      421 qwyarreler tramldtfsa wlrgtrgelt evgveiavdg ileprtede
//
LOCUS       WP_258008758             303 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Rhodococcus sp. ENV425].
ACCESSION   WP_258008758
VERSION     WP_258008758.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         <1..303
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <2..273
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 agqalgpsmg gliadhwgwr wvfvplvpva ligfagtlrw ipafegrrmr ldgpgaaalt
       61 lgaavlvlgl tlvpqpgval pvalaligga avvlvwfvlh clrtqvpfvd vrlvaeprfa
      121 rsaiaafgqm fclgatllav plyltgagvs talagtilfa lpavmvvlap ivgrttdrlg
      181 arrvlragla vlivaqsala avlataatnh waivavlavt gvgsalvqtp aaagstrspa
      241 gaqgtglglf nlirfggsav gaawvaiavd swsypvlfvv cavvvaagla asflgrdpel
      301 agv
//
LOCUS       WP_258008572              45 aa            linear   BCT 02-MAR-2025
DEFINITION  glutamate synthase central domain-containing protein, partial
            [Rhodococcus sp. ENV425].
ACCESSION   WP_258008572
VERSION     WP_258008572.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 45)
  AUTHORS   van den Heuvel,R.H., Ferrari,D., Bossi,R.T., Ravasio,S., Curti,B.,
            Vanoni,M.A., Florencio,F.J. and Mattevi,A.
  TITLE     Structural studies on the synchronization of catalytic centers in
            glutamate synthase
  JOURNAL   J Biol Chem 277 (27), 24579-24583 (2002)
   PUBMED   11967268
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016768.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04898.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..45
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         <1..>45
                     /product="glutamate synthase central domain-containing
                     protein"
                     /GO_function="GO:0015930 - glutamate synthase activity
                     [Evidence IEA]"
                     /GO_process="GO:0008152 - metabolic process [Evidence
                     IEA]"
     Region          <1..>45
                     /region_name="Glu_syn_central"
                     /note="Glutamate synthase central domain; pfam04898"
                     /db_xref="CDD:461469"
ORIGIN      
        1 vtnppldair ervvtsmrrv agpednlfda spkscrqlvl pgpvl
//
LOCUS       WP_258008760             221 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein, partial [Rhodococcus sp.
            ENV425].
ACCESSION   WP_258008760
VERSION     WP_258008760.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 221)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         <1..221
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
     Region          <2..217
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
ORIGIN      
        1 aaaalivkga fglsgqactg tsrvvaiddi hdallervva raealtvgpg lragasmgpl
       61 asrgqldkfl eyvavgqdeg arlvcggtrc ddtgfgdgff vrptvfadta pgmrilteei
      121 fgpvlafqra ssfdeavtla ndtafglsaa ivtrdldrag qfvarsrtgl vkvnqptngm
      181 amnapfggyk asstqtfkeq agptlmqfyq sektvyidpv a
//
LOCUS       WP_258008767             668 aa            linear   BCT 02-MAR-2025
DEFINITION  ESPR-type extended signal peptide-containing protein, partial
            [Burkholderia pseudomallei].
ACCESSION   WP_258008767
VERSION     WP_258008767.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 668)
  AUTHORS   Leyton,D.L., Rossiter,A.E. and Henderson,I.R.
  TITLE     From self sufficiency to dependence: mechanisms and factors
            important for autotransporter biogenesis
  JOURNAL   Nat Rev Microbiol 10 (3), 213-225 (2012)
   PUBMED   22337167
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 668)
  AUTHORS   Desvaux,M., Scott-Tucker,A., Turner,S.M., Cooper,L.M., Huber,D.,
            Nataro,J.P. and Henderson,I.R.
  TITLE     A conserved extended signal peptide region directs
            posttranslational protein translocation via a novel mechanism
  JOURNAL   Microbiology (Reading) 153 (Pt 1), 59-70 (2007)
   PUBMED   17185535
REFERENCE   3  (residues 1 to 668)
  AUTHORS   Desvaux,M., Cooper,L.M., Filenko,N.A., Scott-Tucker,A.,
            Turner,S.M., Cole,J.A. and Henderson,I.R.
  TITLE     The unusual extended signal peptide region of the type V secretion
            system is phylogenetically restricted
  JOURNAL   FEMS Microbiol Lett 264 (1), 22-30 (2006)
   PUBMED   17020545
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024418.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13018.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>668
                     /product="ESPR-type extended signal peptide-containing
                     protein"
     Region          1..50
                     /region_name="ESPR"
                     /note="Extended Signal Peptide of Type V secretion system;
                     pfam13018"
                     /db_xref="CDD:463773"
     Region          <86..666
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
ORIGIN      
        1 mnkiyrkvwn kargqlvvas elassrssvg easvdagrsg drtgsaafas eernpgsgrm
       61 mplaiavalt fspyawagvg gadngvtgts nnggvggssg gggvqfsdmg vafvgdgdcs
      121 mltsgpgsya gvygsgsnyl gglfgfgaqt savgwgtpsn agansgivpy qgaaqtfgnv
      181 tyagngtqsg nftqafglns favgcgahat glsataigwg ttasgagsva lglystasgq
      241 gslafgtsat atatdtialg tlatanavsg vaigantqas aanataiggn ssganlgaqa
      301 taagataigg natagaaata tnaiaiggqs sakdandvav gvgaragtgs gagndlaign
      361 gatatggnsi aqgagasana agavaigksa saaggqavsi gvantasgng avaigdpnva
      421 tgtgavalgn nntangqgav algnvstavg qgsvalgnss naaaaggval gdtasavmag
      481 glalgslata snandvalga gsktaaavat stvsvngany avagsgpast vsvgapgser
      541 titnvaagqv sagstdavng selyatnqai ttglstanss iaslststst glssansnig
      601 slstglsttn stvaslstst vaglnslstg lsttnsnvas lssststgls sansavasls
      661 tststglr
//
LOCUS       WP_258008781             230 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Rhodococcus sp. ENV425].
ACCESSION   WP_258008781
VERSION     WP_258008781.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         <1..230
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <15..204
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 tthteapgpv arapisslft npavlcayig gglqmftaaa lmawlpsffg rsyglaadka
       61 aamaavfvll igagmivcgi vadraaridp arkwtvaiai slaagvlliv gfrlpvgtaq
      121 lvllglgaff sagstgavta mvanlthptv rasafgtttl ansllglaag pfvvgvladr
      181 islanalqla plvylgavav llagkrvypa gvrklatlsa tpaqqtgadk
//
LOCUS       WP_258008803             192 aa            linear   BCT 02-MAR-2025
DEFINITION  lycopene cyclase family protein, partial [Rhodococcus sp. ENV425].
ACCESSION   WP_258008803
VERSION     WP_258008803.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 192)
  AUTHORS   Cunningham,F.X. Jr. and Gantt,E.
  TITLE     One ring or two? Determination of ring number in carotenoids by
            lycopene epsilon-cyclases
  JOURNAL   Proc Natl Acad Sci U S A 98 (5), 2905-2910 (2001)
   PUBMED   11226339
REFERENCE   2  (residues 1 to 192)
  AUTHORS   Cunningham,F.X. Jr., Pogson,B., Sun,Z., McDonald,K.A.,
            DellaPenna,D. and Gantt,E.
  TITLE     Functional analysis of the beta and epsilon lycopene cyclase
            enzymes of Arabidopsis reveals a mechanism for control of cyclic
            carotenoid formation
  JOURNAL   Plant Cell 8 (9), 1613-1626 (1996)
   PUBMED   8837512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017634.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05834.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         1..>192
                     /product="lycopene cyclase family protein"
     Region          5..>192
                     /region_name="carotene-cycl"
                     /note="lycopene cyclase family protein; TIGR01790"
                     /db_xref="CDD:130850"
ORIGIN      
        1 midaevlvvg lgpagravah ravaagldvl avdpqpdrpw tatyaawlde lpswlppsvl
       61 aarvdepaaw tvrphrierp ygvfdasalq rslaleparv ragrvdavap drvtladgsv
      121 lrarsvidar gvpadrsraq qtafgvtvdt ataapvlegr aawfmdwrrd nrtrsgdaps
      181 flyavplggg rv
//
LOCUS       WP_258008807             280 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Rhodococcus sp.
            ENV425].
ACCESSION   WP_258008807
VERSION     WP_258008807.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 280)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         <1..>280
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..>280
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
ORIGIN      
        1 gfrielgeid talaahddva favtightal sgdtalvayv lpetghhvda aalrghvagq
       61 lpahmvpaai vvldeipltp vgkldrralp vpdlsatgey rapatdteat ladivaealg
      121 hekvsvddsf fdlggnslia trvvarinaa lgtdagvrvl feaptvrtla arilddhagg
      181 trvpltagpr pdriplsppq qrmwfvnqfd tasaaynipm airltgrldr aaltaavhdl
      241 itrhetlrtw ypnentgpvq lvtdpaqatp dldpvpvsad
//
LOCUS       WP_258008820             182 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF308 domain-containing protein, partial [Rhodococcus sp. ENV425].
ACCESSION   WP_258008820
VERSION     WP_258008820.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 182)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015674.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03729.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         1..>182
                     /product="DUF308 domain-containing protein"
     Region          43..180
                     /region_name="HdeD"
                     /note="Acid resistance membrane protein HdeD, DUF308
                     family [General function prediction only]; COG3247"
                     /db_xref="CDD:442478"
ORIGIN      
        1 mpatgphrra raataalrta pwwtsvllgl vclllglllt trpltslsal glliglaait
       61 agtadllaty rshagaaata talawigfgi avlawlgral dllapavala lvvggalrlv
      121 raargdlder lttavlglad ivfgvlawrw pdvtvlvvaf lfgirtvffg larigdglaa
      181 ld
//
LOCUS       WP_258008829             503 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Rhodococcus sp.
            ENV425].
ACCESSION   WP_258008829
VERSION     WP_258008829.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 503)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         <1..>503
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..>502
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
ORIGIN      
        1 yvifggeale prrlegwfar hgdtsprlvn mygitettvh vsyreigadl aeagsasivg
       61 vpiaglrvyv ldtrlnpvpv gvagemyvgg gqlargylgr pdlsaarfva dpfsadggll
      121 yrtgdvarwa vsgdleylgr addqvkirgf rielgevesa vlaqqpvgqa avivredapg
      181 aarivayvvp adgatvdvee lragvgalvp eymvpsafvv idaipltvng kldrralpep
      241 vfetrvfrap stpveeivag tfaevlgver vgadddffel ggnsliatqv vsrlgaaldt
      301 qvpvrtlfea stvaalaarv eqdatgggrv pltartrper iplspaqqrm wflnrfdpes
      361 taynipmalr ltgdldvaal raavadlvar hetlrtvype tnsgpvqeir patavpigle
      421 pvdvpaaele srlralastg fdvtreiplr iallrlapae yvlvtvvhhi aadgssmvpm
      481 ardvmtayaa raagtepawa ple
//
LOCUS       WP_258008837             218 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6286 domain-containing protein, partial [Rhodococcus sp.
            ENV425].
ACCESSION   WP_258008837
VERSION     WP_258008837.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039399.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19803.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         <1..218
                     /product="DUF6286 domain-containing protein"
     Region          120..211
                     /region_name="DUF6286"
                     /note="Family of unknown function (DUF6286); pfam19803"
                     /db_xref="CDD:466194"
ORIGIN      
        1 aatsvagpae rsepavpvey teadivarte yrapvpvvsp lpplahpaaa paaaliavga
       61 lalafaaare llivrgtyag apwlrnsfew fgrlhwqswi apvaavlvll gvvlvvvavk
      121 prrrthvplq vsgpvptvwm rrtdlarmcs ahastlpgvy aartvvdrrr alvsvvgsge
      181 estadlvaav rgavapnlal laepialvvq vhrprtar
//
LOCUS       WP_258008839             268 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Rhodococcus sp. ENV425].
ACCESSION   WP_258008839
VERSION     WP_258008839.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 268)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         <1..>268
                     /product="AMP-binding protein"
     Region          <2..>261
                     /region_name="EntF"
                     /note="seryl-AMP synthase component of non-ribosomal
                     peptide synthetase [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG1020"
                     /db_xref="CDD:440643"
ORIGIN      
        1 vrstarhplf qvglsfqnva qsrlelpglt ianvdadmqi sqfdlhlivt drhaedgaaa
       61 gvtgfftyat dlfdestvag farrflrlle avvadpslpv gdvpllddae rlrvlegwnd
      121 tdhavdasvt lpdlfdaqvr rtpdatalff egetltygef dirvnrlarr lisagvgpes
      181 tvalamrrsi ellvgmyava kaggvyvpld pdqpaertgy ildaaapvvv ltadgveipg
      241 drsvprlaid tadlstyaga pvtdaerr
//
LOCUS       WP_258008846             200 aa            linear   BCT 02-MAR-2025
DEFINITION  HAMP domain-containing protein, partial [Rhodococcus sp. ENV425].
ACCESSION   WP_258008846
VERSION     WP_258008846.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 200)
  AUTHORS   Aravind,L. and Ponting,C.P.
  TITLE     The cytoplasmic helical linker domain of receptor histidine kinase
            and methyl-accepting proteins is common to many prokaryotic
            signalling proteins
  JOURNAL   FEMS Microbiol Lett 176 (1), 111-116 (1999)
   PUBMED   10418137
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012876.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00672.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         <1..>200
                     /product="HAMP domain-containing protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <27..>200
                     /region_name="PRK10549"
                     /note="two-component system sensor histidine kinase BaeS"
                     /db_xref="CDD:182539"
ORIGIN      
        1 glfhnhleqa giehvsteaa hveeaftsam iislaialvv salmalavsw yftrrvqrsv
       61 tgvatsatei agghydvrlp gpglghefdq laetfnqlad rldsvettrr rmlsdlahem
      121 rtplatldah iealedgirv pdaetlavlr sstarlgrla edmgavsrae egrlsvtpvp
      181 tdtrtlvdaa vrvaadryaa
//
LOCUS       WP_258008853             754 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Rhodococcus sp.
            ENV425].
ACCESSION   WP_258008853
VERSION     WP_258008853.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 754)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         <1..>754
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..423
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation domain of nonribosomal
                     peptide synthetases (NRPSs) and similar domains; cd19540"
                     /db_xref="CDD:380463"
     Region          469..>754
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(606,609..614,616..617)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
ORIGIN      
        1 mwflnrfdpd savnnlplai rlrgdldvga lraaiddvvf rheslrtvyp evdgvarqvv
       61 lptadpaagl eptpvseadl aaavaaeiga gfdvttgvpl rlrlfrlser ehvlvvvlhh
      121 isgdgfsmgp ltrdvmlaya araagrepdw appaiqyady alwqrevlga eddprsvlaq
      181 qlgywrrtls gipdqldlpa drprppvasn rgavagfsvd agthaaltal arghgvtlfm
      241 vvhaalatvl trlsgtediv igtpvagrge aelddvigmf vntlvlrtpv gpgdtfaall
      301 arvretdlea fghadvpfer ivevldpers qarhplfqia lsfqnlartr lelpglavep
      361 vdfafdqakf dlqvtvsdvv aedgapggls valtyatdlf dagtmeafaq rftrvlaava
      421 adpatvvgdi pllpdeerav vleawnapgt raagetlvdr fqaqagrtpd avavtagdrs
      481 ltygelasrv nrlartlidr gvrpdslvav alprteelvv gllavlqagg aylpldltyp
      541 adrlefmlad aapvcvlvsg tdrealpdta vevidvsald lsavpgapvg dderraplrv
      601 dnlayviyts gstgrpkgvq vphrtvlelf entwpafefd erdvwtmfhs yafdfsvwel
      661 wgpllyggrl vvvdhytsrs pedfrallar ervtvlnqtp safyqlaead raaaehggge
      721 tglpalryvi fggealdlrr lagwyarhae dapr
//
LOCUS       WP_258008868             133 aa            linear   BCT 02-MAR-2025
DEFINITION  ferrochelatase, partial [Rhodococcus sp. ENV425].
ACCESSION   WP_258008868
VERSION     WP_258008868.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012964.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00762.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         <1..>133
                     /product="ferrochelatase"
                     /EC_number="4.98.1.1"
                     /GO_function="GO:0004325 - ferrochelatase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
     Region          <17..131
                     /region_name="hemH"
                     /note="ferrochelatase; Reviewed; PRK00035"
                     /db_xref="CDD:234585"
ORIGIN      
        1 taadatggpp elgghlysrq vaeaarlvat aagsadhdlv wqsrsgppqv pwlepdivdh
       61 lealhargvd avvvvpvgfv sdhlevvwdl dteardraae lgmafaraat agpdprfvqm
      121 vrelvrehld gaa
//
LOCUS       WP_258008879             166 aa            linear   BCT 02-MAR-2025
DEFINITION  RcpC/CpaB family pilus assembly protein, partial [Rhodococcus sp.
            ENV425].
ACCESSION   WP_258008879
VERSION     WP_258008879.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 166)
  AUTHORS   Tomich,M., Planet,P.J. and Figurski,D.H.
  TITLE     The tad locus: postcards from the widespread colonization island
  JOURNAL   Nat Rev Microbiol 5 (5), 363-375 (2007)
   PUBMED   17435791
REFERENCE   2  (residues 1 to 166)
  AUTHORS   Iyer,L.M. and Aravind,L.
  TITLE     The emergence of catalytic and structural diversity within the
            beta-clip fold
  JOURNAL   Proteins 55 (4), 977-991 (2004)
   PUBMED   15146494
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028286.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16976.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         <1..166
                     /product="RcpC/CpaB family pilus assembly protein"
     Region          1..>147
                     /region_name="CpaB"
                     /note="Flp pilus assembly protein CpaB [Intracellular
                     trafficking, secretion, and vesicular transport,
                     Extracellular structures]; COG3745"
                     /db_xref="CDD:442959"
ORIGIN      
        1 vaardlrpgq tltaddvtvv erdssqlpsg altdpaeaig htlagpvpag ealvgvrmlg
       61 prlaasatgd aaarvvpvrl adpgvgdllr egdlvdvltv aedgspssga apevrvlatg
      121 atvvlaqgtd qtsdrgekvv llalppepat avaaaslvsa ltvtlh
//
LOCUS       WP_258008873             273 aa            linear   BCT 02-MAR-2025
DEFINITION  FtsK/SpoIIIE domain-containing protein, partial [Rhodococcus sp.
            ENV425].
ACCESSION   WP_258008873
VERSION     WP_258008873.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 273)
  AUTHORS   Begg,K.J., Dewar,S.J. and Donachie,W.D.
  TITLE     A new Escherichia coli cell division gene, ftsK
  JOURNAL   J Bacteriol 177 (21), 6211-6222 (1995)
   PUBMED   7592387
REFERENCE   2  (residues 1 to 273)
  AUTHORS   Wu,L.J. and Errington,J.
  TITLE     Bacillus subtilis SpoIIIE protein required for DNA segregation
            during asymmetric cell division
  JOURNAL   Science 264 (5158), 572-575 (1994)
   PUBMED   8160014
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013727.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01580.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         <1..273
                     /product="FtsK/SpoIIIE domain-containing protein"
                     /GO_function="GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <14..268
                     /region_name="T7SS_EccC_b"
                     /note="type VII secretion protein EccCb; TIGR03925"
                     /db_xref="CDD:274859"
ORIGIN      
        1 avaaaapgrp appvrmlpdr vdragvlaal adrsaaggap gerrlfvpvg ideaelapvg
       61 idfseqphll vfgdsgcgkt tvlrgicrsl veshtgaqar iivgdyrrtl lgvvegehlg
      121 gyapsavtls amardlaavf errmpgpdvt qqqlrersww sgpevfvvvd dydlvsaasq
      181 spltplleyl pqakdvglhl vlarrsggag ralfepviar lrelsaaglv msgnreegal
      241 vgtarprpmp pgrgilvqrd getlvqtawl ppq
//
LOCUS       WP_258008882             596 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Rhodococcus sp.
            ENV425].
ACCESSION   WP_258008882
VERSION     WP_258008882.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus sp. ENV425
  ORGANISM  Rhodococcus sp. ENV425
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 596)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Rhodococcus sp. ENV425"
                     /db_xref="taxon:2042960"
     Protein         <1..>596
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..>596
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
ORIGIN      
        1 vlqgyhpafd aalleillah ttgatlvvap pevyagedlq rllraqrith ylstpavlgt
       61 ldphelpdlr vvasggetlp palaarwtdg rhmldaygpt eativatltd vdgrggigrp
      121 vpgtvahvld arlrpvpdda vgelylages valgylgapa ltaqrfvaap ggtrryrtgd
      181 lvhrrpdgtl afrgrtdrql kvrgvriepg eleaallaqp girhavalaa ggalvafaaa
      241 dpgvepsrvl agltdvvpph rmptrlrlmp elpttvngkl dtaalrdldt agdapaddrp
      301 ltdvedlvvt vaesvlgtrp dihagffaag gdslsavvla arladafgtd vparavlqap
      361 tlaalaahir dgdrtriplr rydddastpl apaqqrlwll graepgsaay tvpvalhltg
      421 dldtaalaaa vadvaarhei lrtayldgva aevdppvlea vpgtdpaaav aevitapfdl
      481 tadaplrirl ielgahewvl aaavhhiafd ggsvaplltd lqhaytarla gaepiwwplp
      541 vryrdyarwq rdllgdpadp dslaarqldh wattlaglpd tplplptdrp rparps
//
LOCUS       WP_258009015             258 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: restriction endonuclease [unclassified Streptomyces].
ACCESSION   WP_258009015
VERSION     WP_258009015.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 258)
  AUTHORS   Bujnicki,J.M. and Rychlewski,L.
  TITLE     Identification of a PD-(D/E)XK-like domain with a novel
            configuration of the endonuclease active site in the
            methyl-directed restriction enzyme Mrr and its homologs
  JOURNAL   Gene 267 (2), 183-191 (2001)
   PUBMED   11313145
REFERENCE   2  (residues 1 to 258)
  AUTHORS   Waite-Rees,P.A., Keating,C.J., Moran,L.S., Slatko,B.E.,
            Hornstra,L.J. and Benner,J.S.
  TITLE     Characterization and expression of the Escherichia coli Mrr
            restriction system
  JOURNAL   J Bacteriol 173 (16), 5207-5219 (1991)
   PUBMED   1650347
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016362.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04471.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..258
                     /product="restriction endonuclease"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_process="GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /calculated_mol_wt=27973
     Region          <2..53
                     /region_name="RE_AspBHI_N"
                     /note="Restriction endonuclease AspBHI N-terminal;
                     pfam18062"
                     /db_xref="CDD:407899"
     Region          68..254
                     /region_name="PDDEXK_nuclease-like"
                     /note="PDDEXK family nucleases; cl40440"
                     /db_xref="CDD:477358"
ORIGIN      
        1 mnyvydiali dltseddtvd wewigarrdk gvshaqaldl aprawrewvk hgssalpglr
       61 rrvaraqvak vrdqrpkpgs geaadletiy kyfdgrkhdf ealaaavaar vlrgaghgyv
      121 egwltrrsgd ggadfvgrld lgggsglagt slvvlgqakc vkpdtlitae qiarvvarlr
      181 rgwigvyvtt gaysesaqte mvedqypiil lngtslvael rsmarddhgg dlaaciehvl
      241 agrevaitnr rpeeillq
//
LOCUS       WP_258009300            2536 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Pseudomonas protegens].
ACCESSION   WP_258009300
VERSION     WP_258009300.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas protegens
  ORGANISM  Pseudomonas protegens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 2536)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 2536)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2536
                     /organism="Pseudomonas protegens"
                     /db_xref="taxon:380021"
     Protein         1..2536
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=274403
     Region          43..>555
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          630..912
                     /region_name="hot_dog"
                     /note="The hotdog fold was initially identified in the E.
                     coli FabA (beta-hydroxydecanoyl-acyl carrier protein
                     (ACP)-dehydratase) structure and subsequently in 4HBT
                     (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A
                     number of other seemingly unrelated...; cl00509"
                     /db_xref="CDD:469797"
     Region          915..1325
                     /region_name="KR_2_SDR_x"
                     /note="ketoreductase (KR), subgroup 2, complex (x) SDRs;
                     cd08953"
                     /db_xref="CDD:187656"
     Site            order(1096..1097,1099,1120..1123,1149..1152,1177..1179,
                     1200..1201,1223..1224,1238,1271)
                     /site_type="other"
                     /note="putative NADP binding site [chemical binding]"
                     /db_xref="CDD:187656"
     Site            order(1201,1225,1238,1242)
                     /site_type="active"
                     /db_xref="CDD:187656"
     Region          1377..1437
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; pfam00550"
                     /db_xref="CDD:425746"
     Region          1497..>2052
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          1672..2524
                     /region_name="EntF2"
                     /note="Thioesterase domain of type I polyketide synthase
                     or non-ribosomal peptide synthetase [Secondary metabolites
                     biosynthesis, transport and catabolism]; COG3319"
                     /db_xref="CDD:442548"
ORIGIN      
        1 mndtqdirlp nqrptqqpph tqaprprrqi gagpqgavaa plqpprvaiv gfsgrfpgad
       61 taeqfwqlll eerssiselp ywhlpgiaer vqlretfscp ggfindpsaf dadffkisar
      121 eaeamdpqhr lvleqtwaaf edaaicphel rgsntgvfig issadyngll arseagahda
      181 tgnahsiian risfmfdfhg psapidtacs sslvavhraa qsilngdctv avaggvnlcf
      241 epmvfigalk agmlsptgrc kafaadadgy vrgegvgvli lkdyqqalad gdnivaaiig
      301 saenhgghan sltapnpraq adlikqacrg idinsigyie vhgtgtrlgd pieisglkqa
      361 faelgadpeq rcylgsvktn ighlesaagi agviktllvl kqgylpkslh seqlnpyidl
      421 agspfavlqa grewpqvsdr qgqalprrag vssfgfggan ahvvleavep vipgneaqga
      481 asvfvlsakt pealqsridq lidfvqrqpq lqlaelavsl qlgreameyr cgfvahsrds
      541 llsqlrdsga gegappagki apeplqralq erdlgtllsl wqqgatldwr qlyeqprprr
      601 islptypfsr erywiseapt alptgaaslh plvqrntsdl agqrfsnrfd gnewffsghr
      661 vngrkvlpgv aylemaraav ersmvdadav valkhvawrq pmvhdggdld idielveqge
      721 gqirfeirgs aadgpsyctg valvgsaerl vpldlgsiag vtnqqrltpe qcyqvfgemg
      781 laygesfrri ntlqagngqv lasllpgera pgcelppgll dsalqaalgl alleplqaqr
      841 ehqplvpfal drvvlgelel lkqpcqawvr ysadhqpgrl nkldldicde qgrialrlqg
      901 fssrklaaap psmlamtpvw rdkalidppq rslarqlivl agaqsqdldl ltqrcqalvg
      961 nrrqihivpl pvvtqdpaia lpalagfvie lvqkspansl vqlvladleh agpvfaslla
     1021 llktaknegl idaaqcielq gslqpqwlvd nalqddervr yrdgqrqvas wqetqlaqgt
     1081 alpwredgvy llsggsgglg lllaeqlarq aqgvrlilas rsagqlspea sqrvaairal
     1141 gaqvqlhald iadrgaveal iaqceqewgt lngifhcagi trdsllqhks atdlaavlap
     1201 kvagvlnldr asahlpldcf vlyssvsavi gnpgqgdyal anayldewag wrgaqvragr
     1261 rqgrtlainw plwrngglqi dgqrqqqmie ltgieplsds gglgflqqal aqasdaerwm
     1321 vlegdiakir rfiagqwqqd rfeappapqe mpaatalaps tplaasaegd lqalairyfk
     1381 qllsatlkrp lekidsdasf erygadsiml aeltrqlerl fgslpntlly eyqtvrelsa
     1441 yfigqhaqrl dqwlrpegtk asapreetsl iaqapvrqra rnrqhcetpa vagnsrdlai
     1501 igisgrypga adletfwhkl aggedlisev psarwdhqay fdpardrfdk tyckwggfld
     1561 gvedfdplff nlspreahii npndrlflet cwnllesagl trqqiqqryq qqvgvfvgvm
     1621 yqqyqafesd lvreslvsvt sysaianrvs yffdfqgpsl aidtmcsssi saihaageal
     1681 rngdcrlaia ggvnltlhpk kyiglsvgqv lgshagsrsf adgdgylpae gvgavllktl
     1741 adaerdgdpi lavikstavn hgghthgfsv psaklqaali dsnfkragid prtlsyvesa
     1801 angsamgdai elsalsrvfs aagvapqsca igsvksnigh aeaasgmsal sklvlqlqhr
     1861 qlapslllge lnpkldfahs pfvlqrtlae wpqpvleidg veqpvprrac lsafgaggsn
     1921 ahliieeypr aatpdlaase pdllqivpls ahssaalqqg lerlarhldr hpqvrlqdla
     1981 htlqngream plrlalrvss taqlrgllae ilqrlqqgqa lasldsadlp lalgnvdevp
     2041 aalasllsgp gaaalsagli aaadlqqlal lwtqggeipw halghntgav liplptyafd
     2101 kqrywleqps avkalheplt aaastphvvg qkpptaaeqg rqlladllgm qpqdlspskp
     2161 lsaygadsiv mlqwamqvqa qidpglalad iqqcqtlgdv lqrlsrdatp asvaesvlpa
     2221 hilgllsgst trfpelqrln pvqqgrpvfw fhgalggsei yqglaqhiqr pffglqargw
     2281 mtdraplqgi qamaayyvqv iqsvqpqgpy dlggyslggm layevtrqlq elgetvsslv
     2341 mldspdvtge rcarladktr llqtvnmslq mtlgptperf aevlihrdei dlalspadyl
     2401 qqltdlarqr glktsdqrlq qllaqvtqiq qayqvehyri qplpraaeva cyyfrnasgl
     2461 wmgdlepffs tdsqefaafn hadywqewqr qlpnfemiev asanhmtllt qpevfrviaq
     2521 fcaalygqrr venavg
//
LOCUS       WP_258009320             398 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Burkholderia ubonensis].
ACCESSION   WP_258009320
VERSION     WP_258009320.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia ubonensis
  ORGANISM  Burkholderia ubonensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
            cepacia complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Burkholderia ubonensis"
                     /db_xref="taxon:101571"
     Protein         1..398
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=43624
     Region          12..374
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mrawarfggd mrvvhvitcl eqggaegvlf rlatfpssqs tahivvslqg lgfygprlle
       61 kgiaviplgm pkgritlsgl hrlygvlrna qpdvvqtwmy hsdligglva rfagignlaw
      121 gvrhanldrd knspmtlrva rlcarlshll praivscsee atathkafgy datkfvnipn
      181 gydlnrfrad asareatrca wnigpdetll gcvarwdvqk dhpnllralr mlaqqgfrgr
      241 cvlvgrnmde hnaelmslir elgierrvml vglrddipsi lnavdllvlp ssgeafpnvl
      301 veamacgtpv vttdvgdarm ivgdtgwvvr pqdsadlasg lrsaldwlrt tdraalaarc
      361 rqrveqhfsl qkmvcsferv wadgctvqdv evhalkig
//
LOCUS       WP_258009301            4979 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Pseudomonas protegens].
ACCESSION   WP_258009301
VERSION     WP_258009301.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas protegens
  ORGANISM  Pseudomonas protegens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 4979)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 4979)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4979
                     /organism="Pseudomonas protegens"
                     /db_xref="taxon:380021"
     Protein         1..4979
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=536196
     Region          181..272
                     /region_name="Methyltransf_12"
                     /note="Methyltransferase domain; pfam08242"
                     /db_xref="CDD:400515"
     Region          392..452
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; pfam00550"
                     /db_xref="CDD:425746"
     Region          501..>1005
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          1167..1542
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(1346,1348..1349,1351,1371..1373,1426..1428,
                     1473..1475,1490,1494,1517..1520)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187656"
     Site            order(1451,1475,1490,1494)
                     /site_type="active"
                     /db_xref="CDD:187656"
     Region          1786..1886
                     /region_name="Methyltransf_12"
                     /note="Methyltransferase domain; pfam08242"
                     /db_xref="CDD:400515"
     Site            order(1788..1794,1817..1818,1842..1844,1860)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     Region          2004..2064
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; pfam00550"
                     /db_xref="CDD:425746"
     Region          2132..>2631
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          2765..3123
                     /region_name="KR_2_SDR_x"
                     /note="ketoreductase (KR), subgroup 2, complex (x) SDRs;
                     cd08953"
                     /db_xref="CDD:187656"
     Site            order(2898..2899,2901,2922..2925,2949..2952,2977..2979,
                     3000..3001,3023..3024,3038,3071)
                     /site_type="other"
                     /note="putative NADP binding site [chemical binding]"
                     /db_xref="CDD:187656"
     Site            order(3001,3025,3038,3042)
                     /site_type="active"
                     /db_xref="CDD:187656"
     Region          3157..3241
                     /region_name="AcpP"
                     /note="Acyl carrier protein [Lipid transport and
                     metabolism]; COG0236"
                     /db_xref="CDD:440006"
     Region          3274..>3808
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          4005..4396
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(4162,4164..4165,4167,4187..4189,4249..4251,
                     4296..4298,4313,4317,4340..4343)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187656"
     Site            order(4274,4298,4313,4317)
                     /site_type="active"
                     /db_xref="CDD:187656"
     Region          4613..4717
                     /region_name="Methyltransf_12"
                     /note="Methyltransferase domain; pfam08242"
                     /db_xref="CDD:400515"
     Site            order(4615..4621,4644..4645,4669..4671,4691)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     Region          4832..4914
                     /region_name="PKS_PP"
                     /note="Phosphopantetheine attachment site; smart00823"
                     /db_xref="CDD:214834"
ORIGIN      
        1 mqtaahqtsa gafgeldala rrllasqlqa lglghaedlq hlatrhgpvt paylqrwlae
       61 slkyvtgvet adagalwqqw dealsgwrqd pdlapralll daclkglpgv lrgeqsapgl
      121 lfpdgsmslv egvykhnrva dyfnqvliea vlayiesrpa daeplrilei gagtggtsag
      181 llaalapwrs qmgeycytdl sraflqhgsd qfaaqhpflh trlfdvsrpc aeqgidtdhy
      241 hlvvatnvlh atpdirqtlr nakallckgg llmlneisea slfthlsfgl legwwlyrdg
      301 plrlpgcpgl spagwqavle qegfspvlfp arqahaqgqq iilaesdgiv rqpvvgqqrp
      361 vpaaadarap retfspgpgq ssadawrrrv adflrhlvsa tlkipadkms lsrpledygl
      421 dsilvvrlth afsehfaavd salffevptl aaltehfiqq rgeelqrllg qpeaeqpapq
      481 apastphnsa kareqgaggs iaiigldgry pgaqsmsdlw rnlagghcai geipeerwdw
      541 qryfsaekgq pghlytrwgg fiegidqfda affrisrtea ermdpqerlf lqvayhsied
      601 agynpatlhq qgevgvfvgv mngsynpisn ywsianrvsy qldlqgpsla ldsacssslt
      661 aihlavesli sgscdlaiag ginlivnpqh ylglcemmml srgehcrafa ddadgfvdae
      721 gvgavllkpl eraladgdri yavirggain aggktngytv psagaqqrvl ekalaraevn
      781 arqisyieah gtgtalgdpi eisglsrvfa ssdgascaig siksnighce saagiaglsk
      841 vllqlqhrql vpslhaaqpn pkidfahspf rlqqqlapws tqgepriaai ssfgaggana
      901 sliveehlas pdsrpampgp wlillsardq qrltqavtrl qdflatqdaq qvaladlawt
      961 lqvgreamae rlalqvdsla elqrrlaqwl agetqeqvlq ghsdpydetl eepgtqlieq
     1021 wlqhqqlrel aaawvagavv dwprlyrhda yrrplrislp gypfarnsyw mpglahppah
     1081 evrsaepsdq dlngccylpr wqaqsadela qapgngavll vtlgesaaas egllaalteh
     1141 yqdrrqvlri dctlgttaql aadhwrcsaa dpagwatila algpvaqllv iseqsadels
     1201 paaladslqh helpllrlfk alpsqmpagh gidcfllsfg ryafagapqr gnplgagmag
     1261 lgyalaqseh rvhlrnldln rdeletpdsr rrllaqilae pasqrgepik lsrgerfvqq
     1321 liplalpanr gsasalqhng vylilggsgv igqvisrqli ehyqarviwl grkaadspql
     1381 qqslgheqwr grvdylqvdg tdlvqlqqav alvnqrygri ngavfcamvf dfensiqhss
     1441 eaqfqhilei ksrgslnfyq alagqaldfl cyfssgqgfa fsgaaklsay acgitfadaf
     1501 aeaigprarf pvgvinwgfw raslqaqavs ehldaldddq gftcfsrfva hlagsslrrl
     1561 lcikaspavr qlmavpeglq grlepgalas arlpgvelqp aeherlqqlf dpqmldqsia
     1621 vlllvqlqtl giftspevqs aelwrqqagi geryrrwwqe claillehgy lqqqgqglgl
     1681 atpiarsrha ailaawktqc ehyladperr aqvtlvdacl mhlpqiltgq iqatdllfpd
     1741 gsmdqvegiy khnslsdffn aqlasrvsaq vqrlvaaepg rplrileiga gtggttapll
     1801 aalepwaehl geycysdlsh aflqhghasf aagrpyfttq ildisqppgn rqgydivvat
     1861 nvlhatanmr htlahvrsll rsggllalne lnrktyaatv tfglldgwwl yedpgvripg
     1921 spliaeqtwl ellwssgfeq vdlhlpepla lgqqiitahg daltlhsvap plpstaaedk
     1981 esglnehpvs atataapvad rlqqviiqal artlkadeqs iglrtpfsdy gvdsilgvgf
     2041 ikqlgqqlqi klnsallfeh atvsklqhyl qqahgpqiaq alvaipnsea sseqageapa
     2101 vppavpsnpv laaalagnqa asqpgrsglg aiavigmagq fpgaadvdal wdnllagqhs
     2161 vqalgsdylq peaysadrqp gksycnragi lkdrdcfdpl ffnltpheae smtphqrlvl
     2221 qeswkaleda gynpmtlagq avslyvgaep ggyhhdsftg sseaiiasrl syfldlkgpa
     2281 mvvntgcsss avaihqaces lrhgesrmal aggvyalldq rglislsaid mlspsgqcha
     2341 fdaaadgtvi segvamvvlk rledaeaegd piyavieasg vnqdgvsngi tapngdaqeq
     2401 llrdtwrrfg vdpghisyve ahgtgtrlgd pveanalira frgftdaqgy cvlgsakanl
     2461 ghaaaaagvi glikvllsir hrtlpampgf erinpliele hspfyinrqa qawqasggqr
     2521 rvaalnsfgh sgtnahlvia eypelpppvp staadvvsrv ivlsaktves lgdnvralar
     2581 wldrseapls hiaftlqtar epmavraalv vsdleqlrtq ltrlangdtp amasddsgrl
     2641 ardwlaggsi dwaalwpags arrihlpgyq fakerywaeq tptplvqpav aqrlespatg
     2701 lflarpvwqe plssgadasa elgqslllwv gfndaqvaql qalsaaagvs gevlacansg
     2761 paacyqalai allqrlqalk grvhlelmia eqtpedrlya glegllksac leqpalsarc
     2821 llvntedeqp laaaqlallp gllgarrlra rsvlqrldlq gqhqelqwqe laddvaagrt
     2881 sdrplwkdrg vylitggagg lglifartia eqcrdvtlil vgrshldsrq qaqlqairdl
     2941 gaavvyqpld ltdgqglerl iaqictaygg ldgvlhaagi nrdrllalkt pqdvvevfaa
     3001 kvlgtdlldr acrrlyldff vlfsscsavl gsvgqadyaa anafidqfae lrnlrveqgl
     3061 rfghtlslnf plwrdggmqi sgadqahirq qtgmapmqsv hgiqalqlgl saglarllvi
     3121 egdlaqirgq fgaaepveap papglpgvtv dpaqlsaavl erlkavfcav tklpparvec
     3181 daplehygid simiirlnra leerfsamtq lrpaerllsk tlffeypsld alsaylvaeh
     3241 qracliwsgl aeeapiaapa vgqaspvpas mamaaaepia iigisgrypq aanldeywrn
     3301 lkagrdsite iapqrwpleg fyvdsvaeal kqarsyskwg glidgfadfd plffnispre
     3361 avnmdpqerl flqscwqsle dagitkadla tkyqgnvgvf agitktgygl ygpalreqgq
     3421 lvfprtsfgs tanrvsyvld lngpsepvdt mcsssltalh raceslrrge crmafaggvn
     3481 lylhpsnyve lsagqmlskd grcrsfgegg ngfvpgegvg slllkplsqa ladrdnihgv
     3541 iravavnhgg ktngytvpnp qaqakvirla idqagldasq isyieahgtg telgdpievs
     3601 gltqafaldh valghcalgs vkanighlea aagiagvskv ilqlkhrqlv pslhaatlnp
     3661 nlrldatpfy lqqtlddwhp anagpriagv ssfgaggana hvllqehdey rpmphasdae
     3721 villsardad rlrdyaqall ayiearpgls gadlanlayt lqqgremmaa rlglivdsva
     3781 tlatrlrrfi dhdttadadf hrgdlqgkrp aaqadaeaat qvrqwvesgq lhqllqswvk
     3841 gavidwsllq arrsgalpyr isapvypfar erywlpavqp gasavthtpa apapaaaasd
     3901 glsylarwqa vgqgaeassv epapvqqrcv livaeaalrp vaeaitanyl lsagfatgag
     3961 rvirlepgrh taclaadhwa ldatdsqale qclgavpaid clyffaghaa aadwqaqlds
     4021 pqnheilllr likwlkqhsp cqaidsyiis qdnfdisgea vsamgggltg mayaiaqgeh
     4081 rfrvrnldva sreladsrrr prllhqlqse aglargevla lrdgkayrqr lfrlswqaqp
     4141 savdggfvtp alkqggvyvi lggsgtvgsi isrylladyq arviwlgrss addpkvqqrl
     4201 ascvqraqgs vqpsqlhylq adandpaslq ravawikqhh gaingaifsa vvfnhedpit
     4261 ripeaqfdai lqvksrggie fyraladepl dfmcyfssgq sfafsgaarl gayaagitfg
     4321 dtlvrslrqq aafpvgainw gfwlsslteq qaadptaqpm srhagalqdr egfecfarfi
     4381 dalsqgqldq llcmaasapv qqlmqlqpep ivlgqsagha vddgferyrq aaapllaahd
     4441 papfdramaa mtlvqlcrmg lfsqpgqfad sdglrrqagi geqyarwwat slemlqqqgl
     4501 lerrgtqval tapvdlqale qhwcqlrdql laepqrkaqv elvdaclqql pailgartqa
     4561 tdvmfpqgsm hkvegvyrhn alsdyfnqvv agvvqqhleg lsirepqrqi rileigagtg
     4621 gtssivlpal qpwrermaey cysdisqafl myarntygaa npfltyqlwn veqppqaqgl
     4681 elggydivia anvlhatgsi rrtlahaaal lrrdgivlln eisdrslfah ltfgllkgww
     4741 lyedpelrip gtpalypqsw vrvlgesgfh svafpaqcah glgqqivvaq rngvapaalf
     4801 vpdekpqrqp qpvplatrpl aatvaseplp sapaangggr galtalaldg laktlqlepg
     4861 riqvdqpfad ygidsilgvs fvshigaalg ielntallfd ypsleslvdy llaqypaqca
     4921 alggdaapaa asepapsvgq leaaflcgel aidellqlvn hstsahhdaa qatagkgqs
//
LOCUS       WP_258009371             170 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6708 domain-containing protein [Stenotrophomonas maltophilia].
ACCESSION   WP_258009371
VERSION     WP_258009371.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042867.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20455.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..170
                     /product="DUF6708 domain-containing protein"
                     /calculated_mol_wt=19304
ORIGIN      
        1 mfrldgttls apwdrvyftl grgtgtfgwy nwdvrglild adgvtvretf afciatsrie
       61 nayahweflr rymeegpaav vdavhycmpl dgkrgsfasc kerifaedaq lpgfmwltml
      121 plnylhtivr wvvmqtsrip rfppdiearl tpdagdpcvr dapmnppdlh
//
LOCUS       WP_258009378             148 aa            linear   BCT 02-MAR-2025
DEFINITION  Rap1a/Tai family immunity protein [Stenotrophomonas maltophilia].
ACCESSION   WP_258009378
VERSION     WP_258009378.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (residues 1 to 148)
  AUTHORS   Srikannathasan,V., English,G., Bui,N.K., Trunk,K., O'Rourke,P.E.,
            Rao,V.A., Vollmer,W., Coulthurst,S.J. and Hunter,W.N.
  TITLE     Structural basis for type VI secreted peptidoglycan
            DL-endopeptidase function, specificity and neutralization in
            Serratia marcescens
  JOURNAL   Acta Crystallogr D Biol Crystallogr 69 (Pt 12), 2468-2482 (2013)
   PUBMED   24311588
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18602.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..148
                     /product="Rap1a/Tai family immunity protein"
                     /calculated_mol_wt=15667
     Region          42..132
                     /region_name="Rap1a"
                     /note="Rap1a immunity proteins; pfam18602"
                     /db_xref="CDD:465818"
ORIGIN      
        1 mkghharrah rrmrwlltlg lgalmgpava gttqpertwl vsgaelitll qgkgadgfcd
       61 gehcrglssa rassyilgva dasrgqwcgq grilphelvd qvsshlrqlp rerlqqdasp
      121 lvveglraaf pcgrgtspgg saepgkar
//
LOCUS       WP_258009431             300 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphate/phosphite/phosphonate ABC transporter substrate-binding
            protein [Stenotrophomonas maltophilia].
ACCESSION   WP_258009431
VERSION     WP_258009431.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (residues 1 to 300)
  AUTHORS   Metcalf,W.W. and Wanner,B.L.
  TITLE     Evidence for a fourteen-gene, phnC to phnP locus for phosphonate
            metabolism in Escherichia coli
  JOURNAL   Gene 129 (1), 27-32 (1993)
   PUBMED   8335257
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11461398
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..300
                     /product="phosphate/phosphite/phosphonate ABC transporter
                     substrate-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=33554
     Region          31..288
                     /region_name="PhnD"
                     /note="ABC-type phosphate/phosphonate transport system,
                     periplasmic component [Inorganic ion transport and
                     metabolism]; COG3221"
                     /db_xref="CDD:442454"
ORIGIN      
        1 mqggllslam vllagtvhaa pdrvlvlgri sddpkahyeq lqplldyvva rmhdvgiteg
       61 rilmardpqq masylrrgrv dwvtetsgta valgqrsgar plllterngv reyqtvffvr
      121 rdspiqriqd lrghrlalqn tastsaylvp vmtllqegla pqilagvwdv pgrdsvgyvf
      181 arselniatf vhkgmvevga vssvdwnder rmpaafrrdf rellrtepyp ravemvradl
      241 dprvrdrlqd vllqaasdpq aqgalhrffg tsgfhrvdah aqqrldelkq gltrvrmeve
//
LOCUS       WP_258009447            3775 aa            linear   BCT 02-MAR-2025
DEFINITION  hemagglutinin repeat-containing protein [Stenotrophomonas
            maltophilia].
ACCESSION   WP_258009447
VERSION     WP_258009447.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024728.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13332.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3775
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..3775
                     /product="hemagglutinin repeat-containing protein"
                     /calculated_mol_wt=383782
     Region          1..>22
                     /region_name="ESPR"
                     /note="Extended Signal Peptide of Type V secretion system;
                     pfam13018"
                     /db_xref="CDD:463773"
     Region          67..329
                     /region_name="TPS"
                     /note="TPS secretion domain; pfam05860"
                     /db_xref="CDD:461762"
     Region          132..1723
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          331..349
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          351..370
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          372..389
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          391..412
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          488..507
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          509..525
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          527..545
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          547..565
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          567..588
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          590..609
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          611..631
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          633..650
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          695..713
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          715..735
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          737..753
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          756..774
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          776..797
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          799..817
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          819..860
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          862..883
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          886..903
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          906..926
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          928..946
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          948..966
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          968..989
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          988..2633
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          994..1009
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1011..1032
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1034..1053
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1055..1075
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1077..1094
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1097..1114
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1116..1136
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1138..1156
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1158..1178
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1242..1260
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1262..1283
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1285..1303
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1305..1324
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1328..1346
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1348..1367
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1369..1387
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1389..1408
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1410..1429
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1431..1450
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1457..1475
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1477..1496
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1498..1516
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1518..1537
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1565..1583
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1585..1604
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1606..1623
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1626..1644
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1645..1684
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1686..1702
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1705..1724
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1726..1741
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1744..1762
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1773..1792
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1794..1824
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2574..2710
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          2738..2881
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          2958..3124
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
ORIGIN      
        1 mntiyrlvfn ralrvwqvas elvkgggglv ghvpgrqsaa lsplgfalmc slgwvslvpp
       61 alaqsdarii sdpnapgrer ptmvtapngv pmvnittpsa agvsrnrysq fdvgrdgvil
      121 nnargqvqtq lggwvqgnpw latgsarvil nevngpasrl ngyvevagqr aeviianpag
      181 iqvngggfln asrvtlttgt pmftgagale gyrvtggaiq idgdgldtsr adytdlitrs
      241 lqvnagiwan qlqatlgnnv vsadhsqasa taasgeapaf aldvgalggm fankiwlvgn
      301 ehgvgvrnag sigaqagelv vtvdgrlent galqsrqnvr vqasgdlang gtiaatreva
      361 itaggtldns ggtlnaqrlq veahglrnhg gaieqtgaqa lalkadaasn rsngllgald
      421 avasggngss vgsgtspgng ggtpgtgtpg tpgtgggngg sagtptspel plaegliaia
      481 gtldndggsi snggsvslaa rngldnsggr lgvsalqagg elrndggmlq vhgdaalqvg
      541 llsnqkgals vagdlwldaq sldnrggelr hagkaasswt vqglfnndgg llatnatrla
      601 lragqvgnag griehagggg laldtgdwag sggrlstlgr lqwsagnadl rngslsaagf
      661 eilaatldnr ggsllslgsg assvkattld nsaggtlagn gdlalvattl dnsnglvqqa
      721 gtgtlsvqad tlrgsegrll sngalvlsgg eldvsggtts aqsvqihaga lrnrqgqivs
      781 qgvsalaldv rdaldnqggq ivgngglria agridnqkgt lqsagtqgva ltvrdtldns
      841 gggisgngqv qlqvgsllnq ggkvlaagsg alqvlarell dnsnggrlas tgdlrlqaar
      901 ldnrsgaieh agggtlqiha dslqgaggri lsqsslkleg gqlqlgagsi tqaeriaida
      961 qhldnaggnl satssdtlrl hvaqrvdnsg gtiagngale vkagelinrk gtlsgagtad
     1021 stlqivaald nhegtiasna nrltvtsarl dnsggsirqa gnlgldittg rldgskgtlv
     1081 ssatltlrag dvdhrdatlg adrldleatt ldnaggriia sgegasrika ttlgnaggtl
     1141 asngdlalla qaldnragri qhagsgqlqv saktllgngg svlsngsfal dganldlaaa
     1201 ttsarrvdit adtlttaggt ltatgedalr lrvqgvldnr ggtlagngvl dltaqqlina
     1261 qgtlqgagag hstlaigqal dnqkgrillg gagtvtaasl gnqggtvhag gsalvlgvdg
     1321 rldngdqgll sstgtltlga gsldnrhgtl vagkdlsata aagvdnsdga mqagerlqlq
     1381 gngllnqrgt llggqldidt rgqrldnrag tlgtqkgals vrsgaldnqg grvqsaadlt
     1441 intagqdidn ratagsggll aagklqldgg vldnrggavn aqgdarllla rvdnssggtl
     1501 asatnlslqa aslanasgrl qagrnldltl dghldnadga iaagqlltlt aasvdnrntr
     1561 ggdgtrglqa gqlqfgaqwl dnsqgqvvtd ggarlqingq lqntggvist ggnldsqadn
     1621 vansggllra dgsqtlvara lsedgqvqaq rdlgltlqqg mrhrgewian gtlslnlsgd
     1681 ldnqgvvrgg nldlnaqnit naasgeissq gtthlnargq ltnrglidga lthleaseid
     1741 nlgtgriygd rvaistgvlk nraeeaggat rvgtvaarer ldlgvrelqn tgkgliysgg
     1801 daaiggtlsa driasgiagr idnissvidv tgnlsidaqv vnnirenvvv sqtrtvmdpv
     1861 rldrpawwrn gkngtedirs tshysahevy ylnptdiled tphitpdgft vhravvrlta
     1921 qtsayffgrg glyaglgera rlnvqdgtvv myyvgrqdnq vnpdqvrvga ddpfaelstl
     1981 hpdapafryv ddkltyssny gtcttncvql wtykdysdpd htltnprgsg gnnvssneqy
     2041 riatrtvted vlgagvgada virsggamri gtdnlknhyg siaaggnlsi vgltatakve
     2101 nlaqtlfrth efnnvghtys nervtwsnet iseeigrigg sitsggtlvi dvgdlsnlnq
     2161 grnapnvqng samanlnvqg pkalpdgpgh ggaqgpgqsa gtgaeralaq aadgastqqg
     2221 ssvgvvsgnt gtfgprvvaa sggspdriam gapdtrapsa slfnvnpngg hylvetdprf
     2281 tdhktwlssd hllgqmgysp dtvqkrlgdg yyeqklvreq igqltgrrfl dgyasdeaqy
     2341 ralleagatv asewglrpgv alteaqmaql tsdivwlveq tvtladgstt talvpqvylr
     2401 lrpgdldgng allaganvdi klgnglvntg niagrklvti dagniehlgg sisgqyvgls
     2461 sdkdirvvga avtatdalsv kaagnvtvas tvetqqgggt yqyetnridr vaglyvtnps
     2521 gdgmlsvvag gdislqaaqi rnagadgltq laaggtldvg aialeerrda tfdernhqrs
     2581 srtthaassv qgagdvvlaa gkdinlaaaq ikaagglalq aggdinsqal vdsesrdfan
     2641 agkrsslqvs qrdetvrgsq lsadggials agrdvnlvaa evrseqdais igagrdvnlt
     2701 saqeehtweq dtqrkkrglt sttrtathda tqdilaigtv lsgerisiga grditaegak
     2761 iaatgdvvma akgnlsivaa esshseqhss drkksgllgg mngsfgvtfg srssgnsssl
     2821 tetiaegsiv gsalgsvtlt agetlhiggs dvlskngmtl lgknvridsa eqhseyndrn
     2881 yfrqsglnva vggatvdtiq saravyafak radeveddrl kalyaykaaq gaiavaqaag
     2941 qqsgdgggga glnvrvtagt qrsqsettme qtthrgstlh sdgdvviaat ggdltvvgsn
     3001 vsgrnvdlaa akdlvirsse dryaqdsrsq sqggeigvai sgssgggaai gvyvganaar
     3061 gkadgngtvh nesiikagdr ltfasggdtt lqgaqlvanq vigqvagnlt vrteqdtdry
     3121 ksqqlaakge atigygfegs asgsaalids dyrsvreqtg iaagdggfql qvggnthlvg
     3181 aviastadss knllstgslt vedlnnraef lsasitggts gggspsdgfn fnpsvmpgmp
     3241 tgdsrntttr sgvadgtidi rngdsstlad lqrgvtsldn angfapifde kkvqerqelt
     3301 qilgeigfka vgnlaskksa qakvdlevar angdaeaead alrrisewge sgrnkvllhg
     3361 ltgaavaals ggdisgaaag atgaalakea mtrfltgqgi dprsgefnsl ielasaalgg
     3421 vvggtdgagt allgdqfnrq lhpdeinfla akakdfanll fgcgencssd qvkvargrll
     3481 reayarvdai ygsyesdfaa ssfigsnpmt fvgpdgqqre glieldndrr ndhslykdll
     3541 gtrrtefnll tealldggkt eaalrldynr qlaelatsar grdgvmilet fsgeiggwgs
     3601 vvknvlkgdg esaslaaapl liftkvpgak aaaelaedla tqivkgaasr aeatagtmsa
     3661 nigtpltfnk atrtwsspgg ldygmgsihg nrikhilaht vpnpakvths vfvedrskli
     3721 slideawrmk gaavpgdpga fivpmgrvig tageknirii vkpgtnkiis aypvq
//
LOCUS       WP_258009608             552 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            thailandensis].
ACCESSION   WP_258009608
VERSION     WP_258009608.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia thailandensis
  ORGANISM  Burkholderia thailandensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 552)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Burkholderia thailandensis"
                     /db_xref="taxon:57975"
     Protein         1..>552
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <13..93
                     /region_name="AcpA"
                     /note="Acyl carrier protein/domain [Lipid transport and
                     metabolism, Secondary metabolites biosynthesis, transport
                     and catabolism]; COG3433"
                     /db_xref="CDD:442659"
     Region          117..537
                     /region_name="Cyc_NRPS"
                     /note="Cyc (heterocyclization) domain of nonribosomal
                     peptide synthetases (NRPSs); belongs to the
                     Condensation-domain family; cd19535"
                     /db_xref="CDD:380458"
ORIGIN      
        1 msqsavdsti elsasssdvi shlrsqlval laelldepad aiaalgdded llsygvdsir
       61 lmymqtrvnr mgyaltfdal artptlgawt allaqaarva paapdgaara dvdvhaefel
      121 savqqaywlg rgagevlgdv schaflefrs rgieperlaa acrlvrdrhp mlrarfvggr
      181 qqivaapdap afdyrdwrgr tprqaeaewa alrefrshec ldvaraqvfi aglaqmpdge
      241 drvwlsidll aadvdsvrlv mkeigaayas paslpvapat wfpaylaqra adthaarlaa
      301 rahwharlad lpngpalpla capesirapr fsrlahtlsa aelarlqrra aqhrvtlpsv
      361 fgyafaavla rwsgqhafll nvplfdrhgd apdlgamiad fttlllvecd vrpdacvada
      421 vrafqarlhg aiahaaypal evlrdarrqg tpraapvvfs snlgdelfvp dafrdvfgdl
      481 hdmisqtpqv wldhqlyrvt dgvllawdsv dglfpdgmld amfdayvslv qalcerdwrq
      541 paaialppaq rr
//
LOCUS       WP_258009609             452 aa            linear   BCT 02-MAR-2025
DEFINITION  ESPR-type extended signal peptide-containing protein, partial
            [Burkholderia thailandensis].
ACCESSION   WP_258009609
VERSION     WP_258009609.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia thailandensis
  ORGANISM  Burkholderia thailandensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 452)
  AUTHORS   Leyton,D.L., Rossiter,A.E. and Henderson,I.R.
  TITLE     From self sufficiency to dependence: mechanisms and factors
            important for autotransporter biogenesis
  JOURNAL   Nat Rev Microbiol 10 (3), 213-225 (2012)
   PUBMED   22337167
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 452)
  AUTHORS   Desvaux,M., Scott-Tucker,A., Turner,S.M., Cooper,L.M., Huber,D.,
            Nataro,J.P. and Henderson,I.R.
  TITLE     A conserved extended signal peptide region directs
            posttranslational protein translocation via a novel mechanism
  JOURNAL   Microbiology (Reading) 153 (Pt 1), 59-70 (2007)
   PUBMED   17185535
REFERENCE   3  (residues 1 to 452)
  AUTHORS   Desvaux,M., Cooper,L.M., Filenko,N.A., Scott-Tucker,A.,
            Turner,S.M., Cole,J.A. and Henderson,I.R.
  TITLE     The unusual extended signal peptide region of the type V secretion
            system is phylogenetically restricted
  JOURNAL   FEMS Microbiol Lett 264 (1), 22-30 (2006)
   PUBMED   17020545
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024418.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13018.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Burkholderia thailandensis"
                     /db_xref="taxon:57975"
     Protein         1..>452
                     /product="ESPR-type extended signal peptide-containing
                     protein"
     Region          1..>421
                     /region_name="auto_Ata"
                     /note="trimeric autotransporter adhesin Ata; NF033481"
                     /db_xref="CDD:411124"
ORIGIN      
        1 mnrsyrsiwn ealgawvaas eldsargkpn ksvvaaavav aaalvigvps lasantmipg
       61 svnafgqftv qsctsssgna tagrtttgnt naypvdgsgt ystvsgcnss gnnqlaatvy
      121 gafaqvtntg gtamgflssa alwgtaagle ttasgtaata lgfgstasal nsvaiggagg
      181 ngttplsyan stiasgagai aigsnatkga qataqdsial ggqsssaaqs gvaigraatv
      241 gtsstngial gdsatvaans tnalaigyqa saaasnttai gasstaayan svaigqgskt
      301 gasaptgtgy ltgtaaplse vsvgsatalr ritnvadgsa pqdavtvsql stgmsttass
      361 iaslstsast gisslstgls ttnssvasls tsastglssa nssiaslsts tstgigslst
      421 glsttnsnvt slssglsstn ssltslstsa ss
//
LOCUS       WP_258009615             312 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: AAA family ATPase [Stenotrophomonas].
ACCESSION   WP_258009615
VERSION     WP_258009615.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas
  ORGANISM  Stenotrophomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024793.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13401.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Stenotrophomonas"
                     /db_xref="taxon:40323"
     Protein         1..312
                     /product="AAA family ATPase"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=34792
     Region          2..>28
                     /region_name="Gem1"
                     /note="GTPase SAR1 family domain [General function
                     prediction only]; COG1100"
                     /db_xref="CDD:440717"
ORIGIN      
        1 mvfvigpsgv gkttmrrsvm remfgnpnlw ekgkvpaiet faclpvgayf ssrylarell
       61 kelnaptltw aleggsprss ppsdiqaevr drdlqlgryq lrlteaecws svrrsmvard
      121 ckyvaidqis allvnhknks padhalhlmt laesagsmli mtgihravql wsieselrrs
      181 vtsiwvppys vrrkedrapf lrlltslser hnfskqdlli rmaadllvat ggvygevaql
      241 lsraadaakq egserilkrh ieasyysdnd lanlwrdied fedameagsa tarakpltss
      301 wtssygevcr ev
//
LOCUS       WP_258009662              79 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase, partial [Burkholderia
            thailandensis].
ACCESSION   WP_258009662
VERSION     WP_258009662.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia thailandensis
  ORGANISM  Burkholderia thailandensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 79)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Burkholderia thailandensis"
                     /db_xref="taxon:57975"
     Protein         <1..79
                     /product="PfkB family carbohydrate kinase"
     Region          <1..73
                     /region_name="FruK"
                     /note="1-phosphofructokinase or 6-phosphofructokinase II
                     [Carbohydrate transport and metabolism]; COG1105"
                     /db_xref="CDD:440722"
ORIGIN      
        1 rddavrlpgv kvavrsaiga gdsfvaglva aldrgagiad asryalatas asllsegtal
       61 ctkedveriy relpgmaga
//
LOCUS       WP_258009676             587 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-ketoacyl synthase N-terminal-like domain-containing protein,
            partial [Burkholderia thailandensis].
ACCESSION   WP_258009676
VERSION     WP_258009676.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia thailandensis
  ORGANISM  Burkholderia thailandensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 587)
  AUTHORS   Huang,W., Jia,J., Edwards,P., Dehesh,K., Schneider,G. and
            Lindqvist,Y.
  TITLE     Crystal structure of beta-ketoacyl-acyl carrier protein synthase II
            from E.coli reveals the molecular architecture of condensing
            enzymes
  JOURNAL   EMBO J 17 (5), 1183-1191 (1998)
   PUBMED   9482715
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012337.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00109.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Burkholderia thailandensis"
                     /db_xref="taxon:57975"
     Protein         <1..>587
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
     Region          29..>536
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
ORIGIN      
        1 peiapeiape sasgfasaph papippayep iaivgmsgrf pdardidafw sllmsgrgaa
       61 rrvdphdrfa aprdeaaawl apvpgidefd plffdiapae aqrmdprerl llqhawlale
      121 dagigarala dhalgmfvga eageygglsr eprsivsdhn gvlaarlsyf ldltgpnlsv
      181 ntacssglva lhlairslha recgialaag vnlmlsaelh dkmaragmls qhgvcraldr
      241 dadgfvpgea vvvvalkrla daladgdaih gvirasgvny dgrtngmtap sglaqarllt
      301 dawrtagidp aelgyvvahg tgtrlgdpve lnalgdalra stgrrhfcav tsnkpnvght
      361 laasglvslv nlvealrrav ippsahwreg nefvawgdsp lrvnavasaw pdgarrlgga
      421 safgmsgtna hviveaaepa raraphaprg gvlfvvsakt gdalaqrlrd ladclasdaw
      481 sdgdladvah tllhgrqhfe hrsavfargk adaidalraa adavrnapar rtgalrlldd
      541 yaahlsarya awrdapardv dearrllvgd rrrvprrrda vgarrrt
//
LOCUS       WP_258009830             271 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase domain-containing protein, partial [Bacillus
            thuringiensis].
ACCESSION   WP_258009830
VERSION     WP_258009830.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 271)
  AUTHORS   Xiong,Y. and Eickbush,T.H.
  TITLE     Origin and evolution of retroelements based upon their reverse
            transcriptase sequences
  JOURNAL   EMBO J 9 (10), 3353-3362 (1990)
   PUBMED   1698615
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00078.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         <1..>271
                     /product="reverse transcriptase domain-containing protein"
     Region          <1..232
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            order(10..15,54..55,94,96..97,149..150)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238828"
     Site            order(10..15,54,96)
                     /site_type="other"
                     /note="putative NTP binding site [chemical binding]"
                     /db_xref="CDD:238828"
     Site            55
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238828"
ORIGIN      
        1 rrmtiiidvd lsryfdtirh nillekiakr vqdpqvmhlv kqvikaagki gvpqggpfsp
       61 laaniylnev dwtfdairrk taegnyeavn yhrfaddivi avsghssksg waelvlrrlw
      121 eqlkplgvel nlektqmvnv lkgesfgflg fdlrripnrn kngffvfmip kkkarttvka
      181 kireliqnag akpaqdlikq inavltgwvn yfrignssqa fsevgdytem kirtlltrrk
      241 rrrkrsigwq rwsneylygv lglywdwkvl p
//
LOCUS       WP_258009937             725 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Burkholderia pseudomallei].
ACCESSION   WP_258009937
VERSION     WP_258009937.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 725)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 725)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 725)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 725)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..725
                     /product="ATP-binding protein"
                     /calculated_mol_wt=78330
     Region          <218..688
                     /region_name="TMAO_torS"
                     /note="TMAO reductase sytem sensor TorS; TIGR02956"
                     /db_xref="CDD:274362"
ORIGIN      
        1 mlrgvipefa daeteatfrr csvsenvhqa rvalwavvvt aaffalndvr qpasefesvm
       61 qfglrsavvl gaacvllrlr rpiaaatlqc wllawaivid mlaiaegvas lpnllamqtv
      121 lfglvtslpl rfvpsainga cvvlglaail rwrcaatwpl lyplsitmgs vlavglqqvw
      181 raermrrqef armrrdarlc eelrrakeaa eaadeakstl lavvshevri pmngvlgvlq
      241 llegspldal qrrqvsiard caehligvld glvdymcvda aidastptdf dprqlvqgav
      301 elvrpyasar etridvfveh rvpqalhada arlrqvlmnl lsnavkfter grigvslamr
      361 ecatgkrqle ivvddtgigi pehmltrifd efvqadasig rrfggtglgl alcrrilerl
      421 ggtiaaasey gagsrfrviv pvavaapgpq ppvseapasr rlkllviddd pinqivicgl
      481 ltqaghhatp vsgadaavae iasghfdavf ldlhmpcadg ietarrlrag aarsrrlalp
      541 ivvltadvlr arhtdvvqaf tsilvkpvrq dalrrvlalv gdaagpprpa dgigstdaav
      601 dlaclnehaq algvatlgwl vhrfrstgrr lrrelgeava qrnarrigel shrlassaaa
      661 lglprlrqra ehlrqaaarq pppdlsalli aldiefecaf dalrdiacda rrerqaprlt
      721 aassr
//
LOCUS       WP_258009972             157 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258009972
VERSION     WP_258009972.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..157
                     /product="phosphopantetheine-binding protein"
     Region          <30..149
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
ORIGIN      
        1 glarllrasa aaepadaggq gapahayltr davrawlrqs lpdymipdqv hflpaialtd
       61 sgkvdarnlp vievdeqpgr qaastalqre ladlwerllq vgqigvtddf fvlggqslka
      121 iemvaevgrr ygvkiqlrqf yenptiryle tlltera
//
LOCUS       WP_258009943             325 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258009943
VERSION     WP_258009943.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 325)
  AUTHORS   Woodson,K. and Devine,K.M.
  TITLE     Analysis of a ribose transport operon from Bacillus subtilis
  JOURNAL   Microbiology (Reading) 140 (Pt 8), 1829-1838 (1994)
   PUBMED   7921236
REFERENCE   2  (residues 1 to 325)
  AUTHORS   Hogg,R.W., Voelker,C. and Von Carlowitz,I.
  TITLE     Nucleotide sequence and analysis of the mgl operon of Escherichia
            coli K12
  JOURNAL   Mol Gen Genet 229 (3), 453-459 (1991)
   PUBMED   1719366
REFERENCE   3  (residues 1 to 325)
  AUTHORS   Adams,M.D., Wagner,L.M., Graddis,T.J., Landick,R., Antonucci,T.K.,
            Gibson,A.L. and Oxender,D.L.
  TITLE     Nucleotide sequence and genetic characterization reveal six
            essential genes for the LIV-I and LS transport systems of
            Escherichia coli
  JOURNAL   J Biol Chem 265 (20), 11436-11443 (1990)
   PUBMED   2195019
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014684.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02653.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..325
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          5..325
                     /region_name="COG4158"
                     /note="Predicted ABC-type sugar transport system, permease
                     component [General function prediction only]"
                     /db_xref="CDD:443324"
ORIGIN      
        1 praprraadh rarmqalmrt agmlpvlvll cvgfgfmtdg fftlqnlsiv tqqasinivl
       61 aagmtfvilt ggidlsvgsv laaaavasll asnlpgwgwl gipaalavgl afgvvnggli
      121 sflrlppfiv tlgaltavrg iarlmgndtt ifnpqlpfaf igngsilgvp wlvvialavv
      181 aiswfilrrt vlgmriyavg gnpeaarlsg invrgielfv yassgllagl galmsaarly
      241 aanglqlgqs yeldaiaavi lggtsfvggv gsivgtliga liiavlsngl vllgvsdiwq
      301 yiikglviig avaldryrqh gsart
//
LOCUS       WP_258009982             297 aa            linear   BCT 02-MAR-2025
DEFINITION  thioesterase domain-containing protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258009982
VERSION     WP_258009982.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 297)
  AUTHORS   Schneider,A. and Marahiel,M.A.
  TITLE     Genetic evidence for a role of thioesterase domains, integrated in
            or associated with peptide synthetases, in non-ribosomal peptide
            biosynthesis in Bacillus subtilis
  JOURNAL   Arch Microbiol 169 (5), 404-410 (1998)
   PUBMED   9560421
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013166.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00975.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..297
                     /product="thioesterase domain-containing protein"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <21..291
                     /region_name="EntF2"
                     /note="Thioesterase domain of type I polyketide synthase
                     or non-ribosomal peptide synthetase [Secondary metabolites
                     biosynthesis, transport and catabolism]; COG3319"
                     /db_xref="CDD:442548"
     Region          21..>127
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 ridvrplrla pgvgvprvvv heglgtvhay rpivpalarl gpvlgfavrd aqdyldlpaq
       61 hlsatlgary ayalsregig evdvlgycsg glialemakt lvqlgvavrs ldivssyrip
      121 yliederlvl fnfaatlglp ldalgfpaah lladaladal kadparvapg siqaqleafg
      181 drcapldilr rrvlrvsagl padgdephpl vdererlyrl fmhsvhashw aahapyagpl
      241 rlfvpercnp lipqqraalf dywrdqalgg ialvdvpggh fdcltaafvd thlkear
//
LOCUS       WP_258009985             735 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-ketoacyl synthase N-terminal-like domain-containing protein,
            partial [Burkholderia pseudomallei].
ACCESSION   WP_258009985
VERSION     WP_258009985.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 735)
  AUTHORS   Huang,W., Jia,J., Edwards,P., Dehesh,K., Schneider,G. and
            Lindqvist,Y.
  TITLE     Crystal structure of beta-ketoacyl-acyl carrier protein synthase II
            from E.coli reveals the molecular architecture of condensing
            enzymes
  JOURNAL   EMBO J 17 (5), 1183-1191 (1998)
   PUBMED   9482715
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012337.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00109.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..>735
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
     Region          11..85
                     /region_name="AcpP"
                     /note="Acyl carrier protein [Lipid transport and
                     metabolism]; COG0236"
                     /db_xref="CDD:440006"
     Region          200..>689
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
ORIGIN      
        1 aapaaspagt aresvvaaih ralqqslklp earigdhtpf ldygidsilg vrfvdslkqa
       61 ldvplntavl fdyptverla dfivatygar laargasaap asvatasatl aastastast
      121 astastasta stastastas tastastast astastasta staptaptap aapnasaapa
      181 mpaeavsrda aasraepaga rpadiavigm agqfpdapdv dafralleha rdgapgvsgg
      241 mlenrdrfdh affhitpdea damhpyqrlv lqeswkaled agynpaalag arvgvfvgae
      301 padyrsttfs gssdaliasr vsyhlnlrgp ayvvntgcss gavaihlace slrrnesdvv
      361 lacgifaamg prmlgalgqa gmlsaggrcr sfdagadgta faegigvval krladaiadg
      421 dpihgivkas gvnqdgtsng imapngvaqe elivdvyerf gidpadiryv eahgtgtlfg
      481 daveanalvr afrrftersa ycalgtvkat ightaaaagv iglirillsm rarrlpgmpg
      541 lgranpmidl dasafslglv srewpagrdg rprlaalntf ghsgtnvhiv vqeppqarar
      601 paraadgprv vvplsamdre alrryaarlc erleaegaal cvgdvahtlr varepmaqri
      661 vlfasttgel aallrafvdg rdspclldga vtaaaraagl daaqlaqaar wlagervdwp
      721 paggtpmrvh lpayp
//
LOCUS       WP_258009986             709 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-ketoacyl synthase N-terminal-like domain-containing protein,
            partial [Burkholderia pseudomallei].
ACCESSION   WP_258009986
VERSION     WP_258009986.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 709)
  AUTHORS   Huang,W., Jia,J., Edwards,P., Dehesh,K., Schneider,G. and
            Lindqvist,Y.
  TITLE     Crystal structure of beta-ketoacyl-acyl carrier protein synthase II
            from E.coli reveals the molecular architecture of condensing
            enzymes
  JOURNAL   EMBO J 17 (5), 1183-1191 (1998)
   PUBMED   9482715
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012337.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00109.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..>709
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
     Region          1..61
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; pfam00550"
                     /db_xref="CDD:425746"
     Region          102..>629
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
ORIGIN      
        1 elvaslaqal frpadtidae rgfeaagldp ivadewlarv hrrygvrvra dealacpria
       61 dfaalvaarq eaggaqaaga apvaahdarc aarasadara gdrepiaivg msgrypgard
      121 ldaywenlaa grsaigeipa srwdvarhfd ahpatpgkvy skwigllddv dcfdpaffri
      181 spaeaqemdp qhrlflqegy rafenagysa dtldgrncgv ylgimnqeyr qlgtggavtm
      241 leksnsfaig aarlayhlnl kgpaipvdta cssalvaihl acqalragei dmalaggvtl
      301 ylspdayiem cssgmlspdg rckvfddsad gfvpgegvga vvlkrlgdaq rdgdpiiati
      361 igsginqdgk tngitapnma sqfelvsgvh grygidpati ryveahgtgt klgdpielta
      421 lgdafrvrta qtgfcalgsv ksnightsaa agvaglhkvl lcmrhrtlvp tlhfavpnrh
      481 fdfaaspfyv nterapwapl aasprraavs sfgfsgtnah lvveeyvhpa aaapeaggpf
      541 lfplsartre qlaayaaqlr dhvrraahed agladlaytl qvarkpmaer vgliartkhe
      601 laalldafvd grdggdglia grrdraggtp palspealra lvdagelrti lqrwalgati
      661 dwaclyrdld aaarprriaa psypfarery wlpdpgtqra paargaraa
//
LOCUS       WP_258010117             129 aa            linear   BCT 02-MAR-2025
DEFINITION  Rad52/Rad22 family DNA repair protein, partial [Bacillus
            thuringiensis].
ACCESSION   WP_258010117
VERSION     WP_258010117.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 129)
  AUTHORS   Iyer,L.M., Koonin,E.V. and Aravind,L.
  TITLE     Classification and evolutionary history of the single-strand
            annealing proteins, RecT, Redbeta, ERF and RAD52
  JOURNAL   BMC Genomics 3, 8 (2002)
   PUBMED   11914131
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016024.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04098.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         1..>129
                     /product="Rad52/Rad22 family DNA repair protein"
     Region          1..>119
                     /region_name="DdrA"
                     /note="Predicted ssDNA annealing protein, contains HHH
                     motif, Rad42/Rad22/RecT/erf family [Replication,
                     recombination and repair]; COG4712"
                     /db_xref="CDD:443747"
ORIGIN      
        1 mtnnmeslqa efpfeqlgwk ithtfesngr ffayiapfvd araiqdrfde vfgidkwqvs
       61 yekwgekatk ctisvflner wiskedgsee sdynavkggf snslkraavl wgvgrylyni
      121 kphkveltt
//
LOCUS       WP_258010225             509 aa            linear   BCT 02-MAR-2025
DEFINITION  TolC family protein [Stenotrophomonas maltophilia].
ACCESSION   WP_258010225
VERSION     WP_258010225.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (residues 1 to 509)
  AUTHORS   Johnson,J.M. and Church,G.M.
  TITLE     Alignment and structure prediction of divergent protein families:
            periplasmic and outer membrane proteins of bacterial efflux pumps
  JOURNAL   J Mol Biol 287 (3), 695-715 (1999)
   PUBMED   10092468
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02321.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..509
                     /product="TolC family protein"
                     /GO_function="GO:0015562 - efflux transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=54144
     Region          22..479
                     /region_name="outer_NodT"
                     /note="efflux transporter, outer membrane factor (OMF)
                     lipoprotein, NodT family; TIGR01845"
                     /db_xref="CDD:273830"
ORIGIN      
        1 mimsignrva clsiavlval ssgcasvapr teipdaaarh hvgqaptpaa ldadvlpgtp
       61 nrqwwkdfsd pnldalvsla mrgnhdlksa laavvearam agaarkdylp sgalqvkaea
      121 mqsaqieadp yrqdlprpps qrllsagqmf sweldlfgri gtaaamadrk adaaaadars
      181 aaavlqaeva knyfllrmdq inlsslerev dlskarvvrv karyaaglvd rrealavese
      241 haelvaqvaa tatrlqadra alavlagrsp taqddaweal lapaplpapp dlasltqptd
      301 llarrpdvak adallraslg nvvlaerahl prltlnvfgg ilapfgslgd ssakrfsagp
      361 elqwewlsfg rkkareeaar agsdqnwhaf eqtvltalke sedslhawts sqvrmqqavn
      421 aealssrsss yassrvdagi epkdaglqqq alhekarrel aaahagllma hvqvqlalga
      481 wqpekgdpei eigrpsrksa eseasaahh
//
LOCUS       WP_258010302             396 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Pseudomonas protegens].
ACCESSION   WP_258010302
VERSION     WP_258010302.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas protegens
  ORGANISM  Pseudomonas protegens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Pseudomonas protegens"
                     /db_xref="taxon:380021"
     Protein         1..396
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=41801
     Region          26..386
                     /region_name="CynX"
                     /note="Cyanate permease [Inorganic ion transport and
                     metabolism]; COG2807"
                     /db_xref="CDD:442057"
ORIGIN      
        1 mipvryrilc iysgmlaltq yewmrfapit dqvatqygit ygevgslsla vtalalplal
       61 psgglidris vqtalritai amllaalirv lqphyeylla gqllfgfvqp ltmsllvklm
      121 itwfsedehv rvttlfsmvi flgigsafmi vplteegnvs ssllidvail glialltfiy
      181 vprdgplvqt tsapsksggr llaegvdllr tapfmavllm ifltngyfsa ittwlepill
      241 rqgidaqvsg fivvlmlagg iagmtfmpll vrsgatvggi lsgvsllaag gtvllftsgs
      301 pwilslagiv igaallsplp lllqliadta glsrsgtats ifwlvgniga timiatlgvi
      361 adhgdwgmaa vllclvlvvq itislmgfrm vgartt
//
LOCUS       WP_258010312             220 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase TerL endonuclease subunit, partial [Pseudomonas
            protegens].
ACCESSION   WP_258010312
VERSION     WP_258010312.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas protegens
  ORGANISM  Pseudomonas protegens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 220)
  AUTHORS   Xu,R.G., Jenkins,H.T., Chechik,M., Blagova,E.V., Lopatina,A.,
            Klimuk,E., Minakhin,L., Severinov,K., Greive,S.J. and Antson,A.A.
  TITLE     Viral genome packaging terminase cleaves DNA using the canonical
            RuvC-like two-metal catalysis mechanism
  JOURNAL   Nucleic Acids Res 45 (6), 3580-3590 (2017)
   PUBMED   28100693
REFERENCE   2  (residues 1 to 220)
  AUTHORS   Hilbert,B.J., Hayes,J.A., Stone,N.P., Duffy,C.M., Sankaran,B. and
            Kelch,B.A.
  TITLE     Structure and mechanism of the ATPase that powers viral genome
            packaging
  JOURNAL   Proc Natl Acad Sci U S A 112 (29), E3792-E3799 (2015)
   PUBMED   26150523
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042863.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20441.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Pseudomonas protegens"
                     /db_xref="taxon:380021"
     Protein         <1..220
                     /product="terminase TerL endonuclease subunit"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
     Region          <2..200
                     /region_name="YmfN"
                     /note="Phage terminase-like protein, large subunit,
                     contains N-terminal HTH domain [Mobilome: prophages,
                     transposons]; COG4626"
                     /db_xref="CDD:443665"
ORIGIN      
        1 llffptyedp hwrllpyfwi pdfqladrek rdkvpylawi kakelettpg kaisklfvlr
       61 rlqticgyfd vrkiaydrwr iedlqqlmde hdiclpeiap fgqgykdmgp avdeferrll
      121 gnierappvl dpdaedaeli sdatvtdlve plrhddnpvm twcasnavit adpannrkad
      181 kskaigridg ivasimatgi sgsvpvassg ksiydegvsi
//
LOCUS       WP_258010338             151 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258010338
VERSION     WP_258010338.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 151)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 151)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>151
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          5..>104
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mtepcvlaid lgtsgpkaav vsldgrvvaa ardavatlrm pdggveqdpl avwravkrac
       61 ggalraagia srdvlavaca sqyssivpvg adgapvanmm lwldrrgapr arrgaadgpl
      121 radsplrqwr wlrvhglppv eggislthmr y
//
LOCUS       WP_258010053              83 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6018 family natural product bioysynthesis protein, partial
            [Bacillus thuringiensis].
ACCESSION   WP_258010053
VERSION     WP_258010053.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 83)
  AUTHORS   Ehling-Schulz,M., Fricker,M., Grallert,H., Rieck,P., Wagner,M. and
            Scherer,S.
  TITLE     Cereulide synthetase gene cluster from emetic Bacillus cereus:
            structure and location on a mega virulence plasmid related to
            Bacillus anthracis toxin plasmid pXO1
  JOURNAL   BMC Microbiol 6, 20 (2006)
   PUBMED   16512902
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 83)
  AUTHORS   Ehling-Schulz,M., Vukov,N., Schulz,A., Shaheen,R., Andersson,M.,
            Martlbauer,E. and Scherer,S.
  TITLE     Identification and partial characterization of the nonribosomal
            peptide synthetase gene responsible for cereulide production in
            emetic Bacillus cereus
  JOURNAL   Appl Environ Microbiol 71 (1), 105-113 (2005)
   PUBMED   15640177
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039958.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19482.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         <1..83
                     /product="DUF6018 family natural product bioysynthesis
                     protein"
     Region          <1..75
                     /region_name="DUF6018"
                     /note="Family of unknown function (DUF6018); pfam19482"
                     /db_xref="CDD:437314"
ORIGIN      
        1 pdgkfqyfkp halnekeatq eialyiegiq emkvgyvilw rfvgqqsfys gtkivaepkf
       61 rkilrklkdy ffdyeevvye tek
//
LOCUS       WP_258010363              86 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: XRE family transcriptional regulator
            [Stenotrophomonas].
ACCESSION   WP_258010363
VERSION     WP_258010363.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas
  ORGANISM  Stenotrophomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025120.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13744.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Stenotrophomonas"
                     /db_xref="taxon:40323"
     Protein         1..86
                     /product="XRE family transcriptional regulator"
                     /calculated_mol_wt=9300
     Region          5..63
                     /region_name="HTH_XRE"
                     /note="Helix-turn-helix XRE-family like proteins.
                     Prokaryotic DNA binding proteins belonging to the
                     xenobiotic response element family of transcriptional
                     regulators; cl22854"
                     /db_xref="CDD:473980"
     Site            order(12,16,41)
                     /site_type="other"
                     /note="non-specific DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238045"
     Site            order(15,40)
                     /site_type="active"
                     /note="salt bridge [active]"
                     /db_xref="CDD:238045"
     Site            order(22..23,34,37,41..42)
                     /site_type="other"
                     /note="sequence-specific DNA binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238045"
ORIGIN      
        1 mqtltelgla vanrrralrm tqadvaaqag vssdtlsrfe lgrvsefgsr kllavlsalg
       61 melefkeega agnldelrke hmaprr
//
LOCUS       WP_258010458             547 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258010458
VERSION     WP_258010458.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 547)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>547
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          65..486
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
     Region          522..>547
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
ORIGIN      
        1 mharafhsvi spyhirlplr ririireyvn ttqeygvmtd mldsseisvr ddidpvpgaa
       61 pervlaltag qygiwldqml npdlpcyilg ailridgtfd ealltsvvne vvnandslra
      121 mlvseggsvr qrvlsdvele iahidfsgsa hphdsawrym rtafdtafal dgllcdfriv
      181 respsrtywm yrchhlvadg qsvsmicrmi vdlynrrasa dmarieptps yfdsldddrk
      241 yaessryerd aqfwqdkfss lpppllssrs seaaarpasf pdgqvnltie rakydrlgri
      301 aeasgctivh vmfgvlalyf srayqvdevv igmpvhnrst aqqkraigmf asvvpiripv
      361 dgnerfvsll ngvsaelrhc yrhqrfpiae lnrrlglvrt grrqlfdltl sfekfpldfy
      421 igdvklglts mrhrfeqtpi tvnvqdyhed qdlvmqfnyd vnafshaevd nigtriggll
      481 daliehhddm pvgmlpllde aerkqvvyew naterdypie qcihqlfeaq vdrkpeaial
      541 tfdgqrl
//
LOCUS       WP_258010459             184 aa            linear   BCT 02-MAR-2025
DEFINITION  BBE domain-containing protein [Pseudomonas protegens].
ACCESSION   WP_258010459
VERSION     WP_258010459.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas protegens
  ORGANISM  Pseudomonas protegens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 184)
  AUTHORS   Facchini,P.J., Penzes,C., Johnson,A.G. and Bull,D.
  TITLE     Molecular characterization of berberine bridge enzyme genes from
            opium poppy
  JOURNAL   Plant Physiol 112 (4), 1669-1677 (1996)
   PUBMED   8972604
REFERENCE   2  (residues 1 to 184)
  AUTHORS   Kutchan,T.M. and Dittrich,H.
  TITLE     Characterization and mechanism of the berberine bridge enzyme, a
            covalently flavinylated oxidase of benzophenanthridine alkaloid
            biosynthesis in plants
  JOURNAL   J Biol Chem 270 (41), 24475-24481 (1995)
   PUBMED   7592663
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019643.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08031.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Pseudomonas protegens"
                     /db_xref="taxon:380021"
     Protein         1..184
                     /product="BBE domain-containing protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=20633
     Region          123..179
                     /region_name="BBE"
                     /note="Berberine and berberine like; pfam08031"
                     /db_xref="CDD:369658"
ORIGIN      
        1 mdwlyvtqmi ngsgnnqrgk yksdyqveqf sdqacnallt hlteatpdkr fsqslvqids
       61 yggainkkgm gttavpqrss llkaqyqtyw thaaddavqi awirniftav hggkpkrpay
      121 dgcyinypdv dmkytatgav dpdwlnlyyg wnselinrls nlkaaidpnn lfrhelsipt
      181 tkae
//
LOCUS       WP_258010523             536 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Bacillus
            thuringiensis].
ACCESSION   WP_258010523
VERSION     WP_258010523.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 536)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         <1..536
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          2..75
                     /region_name="AcpP"
                     /note="Acyl carrier protein [Lipid transport and
                     metabolism]; COG0236"
                     /db_xref="CDD:440006"
     Region          97..495
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation (C) domain of non-ribosomal
                     peptide synthetases(NRPSs) and similar domains including
                     the C-domain of SgcC5, a free-standing NRPS with both
                     ester- and amide- bond forming activity; cd19531"
                     /db_xref="CDD:380454"
ORIGIN      
        1 vaprneieak mvqiwsevlg iednrigvtn dffelgghsl navtlltkin kqfnkeiglr
       61 difkmstiks lavhlinske fmhtpipkaq kkeyyslsyv qqrlfileqt kqmgtsyntp
      121 vlleiegeld rhrlegtlne likrheafrt sfgfvdgefv qkihlnipfs leykminead
      181 ihlnvekfit pfdltkapli raklfevdks kfvlcidvhh iiadgfslql llneiirlyk
      241 gdvlsepslq ykdyavwqqs sefqeqlrkq etfwhnlykg dvllkklpvd ypsnnphsnq
      301 rrvlnyklnq evcqnlvnls kankitmfqm ffalytivvs kytnsddvii gtptagrtht
      361 dvenivgmfv ntlairnnpk adltfnnflh qvknntmlaf enqdypyeml ldylqfsnmn
      421 sskgiintmf iykkdkinnh fsnvaglklk eypyesgkak fdltvnvves gdyfnlnivy
      481 kdniykqeti kkiaedidli akqvtvdtmi kiadikvegs qtseeisfpe dltfsf
//
LOCUS       WP_258010540             289 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Bacillus
            thuringiensis].
ACCESSION   WP_258010540
VERSION     WP_258010540.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 289)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         <1..>289
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <5..270
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation (C) domain of non-ribosomal
                     peptide synthetases(NRPSs) and similar domains including
                     the C-domain of SgcC5, a free-standing NRPS with both
                     ester- and amide- bond forming activity; cd19531"
                     /db_xref="CDD:380454"
ORIGIN      
        1 elyyenelpa lklqykdyae wqqefiqsea iqiqkeywmn rfkdgvpvve lptdymrpsi
       61 qsfegdsvff eidvsltkrl kqicqdngvt lymalmsiyq iwlskhtgqe dvmvgtvtag
      121 rhntdlyqvm gmfvntlalr gnpkggktfg qflqetkent veafenqdyq feelieelem
      181 pretsrnplf dtmfvlenid isefntgnlt imphktnyaf akfdmtllae eninqisfrw
      241 eyatklykre tierykehfi qilkeilnnp dqkiadikmi teiehhkil
//
LOCUS       WP_258010541             274 aa            linear   BCT 02-MAR-2025
DEFINITION  delta endotoxin C-terminal domain-containing protein, partial
            [Bacillus thuringiensis].
ACCESSION   WP_258010541
VERSION     WP_258010541.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 274)
  AUTHORS   Schnepf,E., Crickmore,N., Van Rie,J., Lereclus,D., Baum,J.,
            Feitelson,J., Zeigler,D.R. and Dean,D.H.
  TITLE     Bacillus thuringiensis and its pesticidal crystal proteins
  JOURNAL   Microbiol Mol Biol Rev 62 (3), 775-806 (1998)
   PUBMED   9729609
REFERENCE   2  (residues 1 to 274)
  AUTHORS   Li,J.D., Carroll,J. and Ellar,D.J.
  TITLE     Crystal structure of insecticidal delta-endotoxin from Bacillus
            thuringiensis at 2.5 A resolution
  JOURNAL   Nature 353 (6347), 815-821 (1991)
   PUBMED   1658659
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015877.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03944.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         <1..>274
                     /product="delta endotoxin C-terminal domain-containing
                     protein"
                     /GO_function="GO:0090729 - toxin activity [Evidence IEA]"
     Region          <1..66
                     /region_name="Endotoxin_C"
                     /note="delta endotoxin; pfam03944"
                     /db_xref="CDD:397849"
     Region          74..138
                     /region_name="Endotoxin_C2"
                     /note="Delta endotoxin; pfam18449"
                     /db_xref="CDD:436510"
     Region          142..>264
                     /region_name="Cry1Ac_D5"
                     /note="Insecticidal delta-endotoxin CryIA(c) domain 5;
                     pfam17997"
                     /db_xref="CDD:375474"
ORIGIN      
        1 ngtsvnqgnf qrtmnrgdnl esgnfrtagf stpfsfsnaq stftlgtqaf snqevyidri
       61 efvpaevtfe aeydleraqk avnalftstn qlglktnvtd yhidqvsnlv aclsdefcld
      121 ekrelsekvk hakrlsdern llqdpnfrgi nrqpdhgwrg stditiqggd dvfkenyvtl
      181 pgtfdecypt ylyqkidesk lkaytryqlr gyiedsqdle iylirynakh etvnvpgtgs
      241 lwplsvespi gkcgepnrcv pqlewnsnld cscr
//
LOCUS       WP_258010206             373 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA glycosylase AlkZ-like family protein [Stenotrophomonas
            maltophilia].
ACCESSION   WP_258010206
VERSION     WP_258010206.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (residues 1 to 373)
  AUTHORS   Bradley,N.P., Washburn,L.A., Christov,P.P., Watanabe,C.M.H. and
            Eichman,B.F.
  TITLE     Escherichia coli YcaQ is a DNA glycosylase that unhooks DNA
            interstrand crosslinks
  JOURNAL   Nucleic Acids Res 48 (13), 7005-7017 (2020)
   PUBMED   32409837
REFERENCE   2  (residues 1 to 373)
  AUTHORS   Mullins,E.A., Warren,G.M., Bradley,N.P. and Eichman,B.F.
  TITLE     Structure of a DNA glycosylase that unhooks interstrand cross-links
  JOURNAL   Proc Natl Acad Sci U S A 114 (17), 4400-4405 (2017)
   PUBMED   28396405
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017984.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06224.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..373
                     /product="DNA glycosylase AlkZ-like family protein"
                     /GO_function="GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA]"
                     /GO_process="GO:0036297 - interstrand cross-link repair
                     [Evidence IEA]"
                     /calculated_mol_wt=42795
     Region          36..371
                     /region_name="HTH_42"
                     /note="Winged helix DNA-binding domain; cl19833"
                     /db_xref="CDD:473220"
ORIGIN      
        1 mawiynavmp stptldglrr yavartlftp ttlltairrl gfvqadpira paraqdltlr
       61 hrvkdyragd lerrytrlpv eedclvnygf lprehlalmh prvsrrewda etrrraedvl
      121 afvrergsvh prevdqafah grvtnywggt snasthlldg mhyrgllrvq rrdsgtriya
      181 varhaepdas eraqieraaa lidlvvrkya plpsasltyl vrllgygaph laeqtrhalk
      241 lakgqlssca ldgttwywpa dedprsrrya pdeqvrllap fdpvvwdrrr fellwdwtyk
      301 feaytpapkr qygyyalpvl whdqvvgwan lsmlegnlas svgyagrsla rdkvfrgale
      361 delqrmaafl ehr
//
LOCUS       WP_258010567              33 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Vibrio cholerae].
ACCESSION   WP_258010567
VERSION     WP_258010567.1
KEYWORDS    RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 33)
  AUTHORS   Ren,J., Sainsbury,S., Nettleship,J.E., Saunders,N.J. and Owens,R.J.
  TITLE     The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals
            a novel protein fold incorporating a helix-turn-helix motif
  JOURNAL   Proteins 78 (7), 1798-1802 (2010)
   PUBMED   20196080
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013540.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01381.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..33
                     /organism="Vibrio cholerae"
                     /db_xref="taxon:666"
     Protein         1..33
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=3685
     Region          <1..>23
                     /region_name="XRE"
                     /note="DNA-binding transcriptional regulator, XRE-family
                     HTH domain [Transcription]; COG1476"
                     /db_xref="CDD:441085"
ORIGIN      
        1 mrqedvasai nitkttyiky ekgtqsqlei vek
//
LOCUS       WP_258010551             135 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase TerL endonuclease subunit, partial [Bacillus
            thuringiensis].
ACCESSION   WP_258010551
VERSION     WP_258010551.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 135)
  AUTHORS   Xu,R.G., Jenkins,H.T., Chechik,M., Blagova,E.V., Lopatina,A.,
            Klimuk,E., Minakhin,L., Severinov,K., Greive,S.J. and Antson,A.A.
  TITLE     Viral genome packaging terminase cleaves DNA using the canonical
            RuvC-like two-metal catalysis mechanism
  JOURNAL   Nucleic Acids Res 45 (6), 3580-3590 (2017)
   PUBMED   28100693
REFERENCE   2  (residues 1 to 135)
  AUTHORS   Hilbert,B.J., Hayes,J.A., Stone,N.P., Duffy,C.M., Sankaran,B. and
            Kelch,B.A.
  TITLE     Structure and mechanism of the ATPase that powers viral genome
            packaging
  JOURNAL   Proc Natl Acad Sci U S A 112 (29), E3792-E3799 (2015)
   PUBMED   26150523
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042863.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20441.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         <1..135
                     /product="terminase TerL endonuclease subunit"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
     Region          <1..135
                     /region_name="YmfN"
                     /note="Phage terminase-like protein, large subunit,
                     contains N-terminal HTH domain [Mobilome: prophages,
                     transposons]; COG4626"
                     /db_xref="CDD:443665"
ORIGIN      
        1 ikthirnmek dhkfkikeic adpwnatqfm qdmetegytm ieirqgmatl sgptkdfreq
       61 vylkkvihnn npvlnwatsn aitkqdanen imldkskate ridpiaavin shvrcmlnsg
      121 evdlnsyils qdfsf
//
LOCUS       WP_258010719             152 aa            linear   BCT 02-MAR-2025
DEFINITION  polymorphic toxin type 44 domain-containing protein, partial
            [Ralstonia solanacearum].
ACCESSION   WP_258010719
VERSION     WP_258010719.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia solanacearum
  ORGANISM  Ralstonia solanacearum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Ralstonia; Ralstonia
            solanacearum species complex.
REFERENCE   1  (residues 1 to 152)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026945.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15607.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Ralstonia solanacearum"
                     /db_xref="taxon:305"
     Protein         <1..152
                     /product="polymorphic toxin type 44 domain-containing
                     protein"
     Region          53..145
                     /region_name="Ntox44"
                     /note="Bacterial toxin 44; pfam15607"
                     /db_xref="CDD:464773"
ORIGIN      
        1 tmysddfmgp lprdgyrtsq mtktrcglvp psppgvdivq nmslakskin pvwfrnmvkn
       61 kgpwdykqqg siyqdfgnfn ygatgksfgf yrqillqeag raqqaagtsr pewgyppssr
      121 wdiyggqppy gddpgdqeqi nngvnfcqcm gy
//
LOCUS       WP_258010724             739 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Ralstonia
            solanacearum].
ACCESSION   WP_258010724
VERSION     WP_258010724.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia solanacearum
  ORGANISM  Ralstonia solanacearum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Ralstonia; Ralstonia
            solanacearum species complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Ralstonia solanacearum"
                     /db_xref="taxon:305"
     Protein         <1..>739
                     /product="Ig-like domain-containing protein"
     Region          <1..44
                     /region_name="Big_13"
                     /note="Bacterial Ig-like domain; pfam19077"
                     /db_xref="CDD:465968"
     Region          49..148
                     /region_name="Big_13"
                     /note="Bacterial Ig-like domain; pfam19077"
                     /db_xref="CDD:465968"
     Region          <157..680
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 asgnwtftpt taltdgshsl tatatdaagn vstassaftl tvdtaapatp vistvtddva
       61 pvtgtitagg stndanptlt gtaeanstis vfdgttllgt tttdasgnwt ftpstaladg
      121 shsltatatd aagnvsaast aftltvdtaa paapvistit ddvapvtgai tdggstndat
      181 ptltgtaean stisifdgtt llgtttadas gnwtftpsta ladgshnlta tatdtagnvs
      241 aassaftltv dtaapaapvi stvtddvapv tgtitdggst ndanptltgt aeanstisvf
      301 dgttllgtta adasgnwtft pstaltdgsh sltatatdtt gnvsaasspf tltvdtaapa
      361 tpvistvtdd vapvtgaitd ggstndampt ltgtaeanst isifdgttll gtttadasgn
      421 wtftpstalt dgshsltata tdtagnvsta ssaftltvdt aapatpvist vtddvapvtg
      481 titaggstnd atptltgtae anstisvfdg ttllgtttad asgnwtftpt altdgshslt
      541 atatdaagnv stassvfalt vdtaapaapi vstvtddvap itgaitdggs tndanptltg
      601 taeanstisi fdgttllgtt tadasgnwtf tpstaltdgs hsltatatda agnvsaasta
      661 ftltvdtaap atpvistvtd dvapvtgtit dggstndatp tltgtaeans tisifdgttl
      721 lgtttadasg nwtftptta
//
LOCUS       WP_258010798             413 aa            linear   BCT 02-MAR-2025
DEFINITION  SurA N-terminal domain-containing protein [Ehrlichia ruminantium].
ACCESSION   WP_258010798
VERSION     WP_258010798.1
KEYWORDS    RefSeq.
SOURCE      Ehrlichia ruminantium (heartwater rickettsia)
  ORGANISM  Ehrlichia ruminantium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rickettsiales; Anaplasmataceae; Ehrlichia.
REFERENCE   1  (residues 1 to 413)
  AUTHORS   Calabrese,A.N., Schiffrin,B., Watson,M., Karamanos,T.K., Walko,M.,
            Humes,J.R., Horne,J.E., White,P., Wilson,A.J., Kalli,A.C., Tuma,R.,
            Ashcroft,A.E., Brockwell,D.J. and Radford,S.E.
  TITLE     Inter-domain dynamics in the chaperone SurA and multi-site binding
            to its outer membrane protein clients
  JOURNAL   Nat Commun 11 (1), 2155 (2020)
   PUBMED   32358557
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 413)
  AUTHORS   Giuseppe,P.O., Von Atzingen,M., Nascimento,A.L., Zanchin,N.I. and
            Guimaraes,B.G.
  TITLE     The crystal structure of the leptospiral hypothetical protein
            LIC12922 reveals homology with the periplasmic chaperone SurA
  JOURNAL   J Struct Biol 173 (2), 312-322 (2011)
   PUBMED   20970503
REFERENCE   3  (residues 1 to 413)
  AUTHORS   Bitto,E. and McKay,D.B.
  TITLE     Crystallographic structure of SurA, a molecular chaperone that
            facilitates folding of outer membrane porins
  JOURNAL   Structure 10 (11), 1489-1498 (2002)
   PUBMED   12429090
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025010.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13624.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Ehrlichia ruminantium"
                     /db_xref="taxon:779"
     Protein         1..413
                     /product="SurA N-terminal domain-containing protein"
                     /calculated_mol_wt=46828
     Region          19..152
                     /region_name="SurA_N_3"
                     /note="SurA N-terminal domain; cl21568"
                     /db_xref="CDD:473912"
     Region          40..308
                     /region_name="prsA"
                     /note="peptidylprolyl isomerase; Provisional; PRK00059"
                     /db_xref="CDD:234605"
ORIGIN      
        1 mivnrenllm iihmrnrtig lfllifafyc snafanvkmv amvngeliss ldleryiais
       61 kffyhvdsdv akdialdsli deyiwkqeae klkvvvseqe ildavnqlfv mkgsnhkenh
      121 nndfksyteq qgldydmliq hvkskllwnk ilmlkvvpyi svsnkeilds qdtmlspngl
      181 nifvhiqeiv lpvglsdnnv tdvirslhdg isidnikkrv egllfeetsi nlkdidivla
      241 nqllnakvnd ligpikteyg nlvikllnrf einrefanss vnlqqmyldv qeskkyvdqi
      301 sllktkakce nfqniaaelg lpkplsfvak vkdlsvkiqs nlqsldigsi vevtnndavn
      361 iimlcnvtkg kaddtsvsdv nmikqklyme kltiqseyll stlkksslie kyn
//
LOCUS       WP_258010593             232 aa            linear   BCT 02-MAR-2025
DEFINITION  CSS-motif domain-containing protein [Klebsiella pneumoniae].
ACCESSION   WP_258010593
VERSION     WP_258010593.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 232)
  AUTHORS   Herbst,S., Lorkowski,M., Sarenko,O., Nguyen,T.K.L., Jaenicke,T. and
            Hengge,R.
  TITLE     Transmembrane redox control and proteolysis of PdeC, a novel type
            of c-di-GMP phosphodiesterase
  JOURNAL   EMBO J 37 (8) (2018)
   PUBMED   29514851
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024202.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12792.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..232
                     /product="CSS-motif domain-containing protein"
                     /calculated_mol_wt=25025
     Region          32..226
                     /region_name="CSS-motif"
                     /note="CSS motif domain associated with EAL; pfam12792"
                     /db_xref="CDD:463709"
ORIGIN      
        1 mmqlsirfvt isillpvclv isistgmavr elerdtavta svllrqvdhv tsiarhttti
       61 tarmagqpcq tilenltqng altpyirstg lirndvlics svtgarqqtt pavygitlsv
      121 apgtfkirai egtssipgqt aiiyasgtin rltafsvvda qyftdlmnsl ddtnhsvlll
      181 rfsdgpvisv ldrdpphtra figefrsays qahlqvitpi halghyvlgf ve
//
LOCUS       WP_258010803             148 aa            linear   BCT 02-MAR-2025
DEFINITION  Rap1a/Tai family immunity protein [Stenotrophomonas geniculata].
ACCESSION   WP_258010803
VERSION     WP_258010803.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas geniculata
  ORGANISM  Stenotrophomonas geniculata
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (residues 1 to 148)
  AUTHORS   Srikannathasan,V., English,G., Bui,N.K., Trunk,K., O'Rourke,P.E.,
            Rao,V.A., Vollmer,W., Coulthurst,S.J. and Hunter,W.N.
  TITLE     Structural basis for type VI secreted peptidoglycan
            DL-endopeptidase function, specificity and neutralization in
            Serratia marcescens
  JOURNAL   Acta Crystallogr D Biol Crystallogr 69 (Pt 12), 2468-2482 (2013)
   PUBMED   24311588
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18602.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Stenotrophomonas geniculata"
                     /db_xref="taxon:86188"
     Protein         1..148
                     /product="Rap1a/Tai family immunity protein"
                     /calculated_mol_wt=15726
     Region          42..132
                     /region_name="Rap1a"
                     /note="Rap1a immunity proteins; pfam18602"
                     /db_xref="CDD:465818"
ORIGIN      
        1 mkghhaphvr rrmrrlfasg lcalagyafa gttqpartwl vsgaelitll qgkgadgfcd
       61 geqcrnlssa rasayiqgva dasrgqwcgq gqilphelvd rvsshlrqlp rerlqqdasp
      121 lvveglraaf pcgrgttphg saepgkeg
//
LOCUS       WP_258010898            1540 aa            linear   BCT 02-MAR-2025
DEFINITION  type IV secretion system protein [Ehrlichia ruminantium].
ACCESSION   WP_258010898
VERSION     WP_258010898.1
KEYWORDS    RefSeq.
SOURCE      Ehrlichia ruminantium (heartwater rickettsia)
  ORGANISM  Ehrlichia ruminantium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rickettsiales; Anaplasmataceae; Ehrlichia.
REFERENCE   1  (residues 1 to 1540)
  AUTHORS   Li,P.L., Hwang,I., Miyagi,H., True,H. and Farrand,S.K.
  TITLE     Essential components of the Ti plasmid trb system, a type IV
            macromolecular transporter
  JOURNAL   J Bacteriol 181 (16), 5033-5041 (1999)
   PUBMED   10438776
REFERENCE   2  (residues 1 to 1540)
  AUTHORS   Liang,Y., Aoyama,T. and Oka,A.
  TITLE     Structural characterization of the virB operon on the
            hairy-root-inducing plasmid A4
  JOURNAL   DNA Res 5 (2), 87-93 (1998)
   PUBMED   9679196
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04610.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Ehrlichia ruminantium"
                     /db_xref="taxon:779"
     Protein         1..1540
                     /product="type IV secretion system protein"
                     /GO_process="GO:0030255 - protein secretion by the type IV
                     secretion system [Evidence IEA]"
                     /calculated_mol_wt=169435
     Region          <230..382
                     /region_name="Maf_flag10_N"
                     /note="Glycosyltransferase Maf N-terminal domain; cl46809"
                     /db_xref="CDD:481149"
     Region          688..>926
                     /region_name="VirB6"
                     /note="Type IV secretory pathway, VirB6 component
                     [Intracellular trafficking, secretion, and vesicular
                     transport]; COG3704"
                     /db_xref="CDD:442918"
     Region          <1141..1457
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
ORIGIN      
        1 mknsiillml cfitgcginc iegskgvsst svsvdvppva kvtiipkkik dengknttir
       61 yrkvhphwid tgirvsesqk inltingsvn lcpkdsfnpk eiivpaiscr ygipddkyqn
      121 estyfnfnik kvcggaylkh qtnklkqdlv kqvifksnvt gnqeqasrqk vkkqqptkqq
      181 vdqvdqmifa pdvhtvstfr lnkgdvfrvn lvprkvkvkg cssaelkdlg iiyysdneif
      241 sddkcnnpvk aesickngiq sfsmkmkmnd keecinfteg againrlqgt evstlvdnry
      301 sprgnkvfyt ndlkkdwika pfiydarivk nqnnidklkk qcevikelnk knmishiint
      361 stsdadilky ykdqkeknii tsevkqdtid vlnsftsydi ncvcgticky depllkqnki
      421 ssvltingdn necsitnnld qefknvkkee lekkdwtkqe wkkdvkteii agltayfrlf
      481 nnrvdriske plyrcfpsds dsglgcistv frksvkensi ksnvnytygf depvvlkfgi
      541 iggynqyagy sggynihver mcnfvdgkkl ymyigntppt mlpgsnntve lfvpkkdkdg
      601 eqstsgtaty tinddnsqkk sgtiylgvdv rgyedqfdyr smpsvesdnk ytvdfainrw
      661 npnfskafvm irdfllkvly glpdnqkvss isqamdvvrt tkskgavqhi ytnqttsgkl
      721 wrgvqalctl yiiftvlgyv igvvkctkyd lgvriakiav vvgllsqdsw elfsshffsl
      781 fvqgvsdlis tfngeldgdn sfafldptig vlltgevwir fltliitgpi gwlvfamiiw
      841 avfvffvcii eaviaylfti vaiaflatla pifitfllfq ltktlfdswi kmlvnfslqp
      901 iilfaalafl nqvmltvlhd vtgftvcnqc figlslpasv tekgappdvc vmpvllpvgy
      961 aselsiddav resdsrdgri gflglpfgit svlillitan amkafrgmse aisqsisgsv
     1021 agigaslhaa tqslasivgl dqetqsiikn amanrrstgq sdvnissran pnpvnegesl
     1081 nkdgddssnr pvtgdhdklg sssvssgenf dsdekhqvss gsrygpvddt linstkgqvl
     1141 dtdsshykdn gdgvkdtsgn vmddgstktr dnvpdegstt nrndstqdni dgktveesva
     1201 tgdgdmqgsn dsdigdrdgs ssaedkvptd nenqndndna qqdgsnveee shaadrhdti
     1261 dsedstddts dssvsegesd vsesdvessg dnttevgsnt ddktlgdddn kdesvqqnes
     1321 dlgeesnttd rtdtmdstda tsdspvsege sdvsesdves sgdnttevgs ntddktpgdd
     1381 dnkdesvqqn esdlgeesnt tdrtdtmdst dgtsdssvse gesdisesdv egntsesdsd
     1441 dekldtnitv dennntndmq daestassav ddsssesedv gkkrgkrdin fldgpqkrrl
     1501 ymdeyssvke kiaghqsaid veteshersq vkrrgkkkde
//
LOCUS       WP_258010543             239 aa            linear   BCT 02-MAR-2025
DEFINITION  insecticidal delta-endotoxin Cry8Ea1 family protein, partial
            [Bacillus thuringiensis].
ACCESSION   WP_258010543
VERSION     WP_258010543.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 239)
  AUTHORS   Schnepf,E., Crickmore,N., Van Rie,J., Lereclus,D., Baum,J.,
            Feitelson,J., Zeigler,D.R. and Dean,D.H.
  TITLE     Bacillus thuringiensis and its pesticidal crystal proteins
  JOURNAL   Microbiol Mol Biol Rev 62 (3), 775-806 (1998)
   PUBMED   9729609
REFERENCE   2  (residues 1 to 239)
  AUTHORS   Li,J.D., Carroll,J. and Ellar,D.J.
  TITLE     Crystal structure of insecticidal delta-endotoxin from Bacillus
            thuringiensis at 2.5 A resolution
  JOURNAL   Nature 353 (6347), 815-821 (1991)
   PUBMED   1658659
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015878.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03945.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         1..>239
                     /product="insecticidal delta-endotoxin Cry8Ea1 family
                     protein"
                     /GO_function="GO:0090729 - toxin activity [Evidence IEA]"
                     /GO_process="GO:0001907 - symbiont-mediated killing of
                     host cell [Evidence IEA]"
     Region          48..239
                     /region_name="Endotoxin_N"
                     /note="delta endotoxin, N-terminal domain; pfam03945"
                     /db_xref="CDD:397850"
ORIGIN      
        1 mdnnpninec ipynclsnpe vevlggerie tgytpidisl sltqfllsef vpgagfvlgl
       61 vdiiwgifgp sqwdaflvqi eqlinqriee farnqaisrl eglsnlyqiy aesfrewead
      121 ptnpalreem riqfndmnsa lttaiplfav qnyqvpllsv yvqaanlhls vlrdvsvfgq
      181 rwgfdaatin sryndltrli gnytdyavrw yntglervwg pdsrdwiryn qfrreltlt
//
LOCUS       WP_258010995             576 aa            linear   BCT 02-MAR-2025
DEFINITION  phospholipase D-like domain-containing protein [Stenotrophomonas
            maltophilia].
ACCESSION   WP_258010995
VERSION     WP_258010995.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13091.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..576
                     /product="phospholipase D-like domain-containing protein"
                     /calculated_mol_wt=62800
     Region          71..347
                     /region_name="PLDc_SF"
                     /note="Catalytic domain of phospholipase D superfamily
                     proteins; cl15239"
                     /db_xref="CDD:472788"
     Region          <309..>393
                     /region_name="Cls"
                     /note="Phosphatidylserine/phosphatidylglycerophosphate/car
                     diolipin synthase [Lipid transport and metabolism];
                     COG1502"
                     /db_xref="CDD:441111"
     Site            order(309,311,324,326,339)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197239"
     Site            309
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197239"
ORIGIN      
        1 meltplsdqw lqsmggmqal fgdlarpgta gdvtvqivrs sgtalhalek kgckelglnl
       61 ddasclqpyw ernqpmhsil damvnciasa rafvyletqf lisecgwsda eagxtvetxi
      121 kggerrpmtk aekkkagyvd kgvamsgpig ktgvvqdlvk rkqgvksaas nplvaaiaar
      181 irraivagqg fhvyitlpvh pegslfdgav lkqqywvqqt llrgddslir ricrsliard
      241 kdirexsvee adlqaevkag rwkeylsvmn lrsygvladi nhknhxapht igadqatply
      301 vvteqcyvhs kllivddava iigsancndr sllgtgdtei aavivdgaak smdlgngvqv
      361 itrkfardlr mklwkkflgq aletkpekgg qfvfsnated yypwfsekvp tlevdkpasa
      421 rtwtgirqla danseayqrv ftnvprdsfp rydsvfhgfp aaglsdkghv rrmlyaqpad
      481 lqsdfmkeps vvndyvtdav grhdvrkatd flrgtatrrg iqgfwvtmpl lwgsdmddpa
      541 aampneiiai vpiegdrste laysdrhgsw ghgeqv
//
LOCUS       WP_258011047             149 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2345 domain-containing protein, partial [Stenotrophomonas
            maltophilia].
ACCESSION   WP_258011047
VERSION     WP_258011047.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021611.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10106.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         <1..149
                     /product="DUF2345 domain-containing protein"
     Region          <1..124
                     /region_name="COG4253"
                     /note="Uncharacterized conserved protein, DUF2345 family
                     [Function unknown]"
                     /db_xref="CDD:443395"
ORIGIN      
        1 deridvlaqt kvvlqagssa itleggnitf scpgefkvka gehpfmggeh avpfipplpg
       61 glqripdwia ldyrdvetqq amagtpyeih frngpvikgk ldvagkahhe pipkqevekv
      121 vyeprsadte dnwpdlelia npqqgagrg
//
LOCUS       WP_258011072              49 aa            linear   BCT 02-MAR-2025
DEFINITION  pyruvate kinase, partial [Mycobacterium avium].
ACCESSION   WP_258011072
VERSION     WP_258011072.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium avium
  ORGANISM  Mycobacterium avium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            avium complex (MAC).
REFERENCE   1  (residues 1 to 49)
  AUTHORS   Yuan,M., McNae,I.W., Chen,Y., Blackburn,E.A., Wear,M.A.,
            Michels,P.A.M., Fothergill-Gilmore,L.A., Hupp,T. and
            Walkinshaw,M.D.
  TITLE     An allostatic mechanism for M2 pyruvate kinase as an amino-acid
            sensor
  JOURNAL   Biochem J 475 (10), 1821-1837 (2018)
   PUBMED   29748232
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 49)
  AUTHORS   Munoz,M.E. and Ponce,E.
  TITLE     Pyruvate kinase: current status of regulatory and functional
            properties
  JOURNAL   Comp Biochem Physiol B Biochem Mol Biol 135 (2), 197-218 (2003)
   PUBMED   12798932
REFERENCE   3  (residues 1 to 49)
  AUTHORS   Valentini,G., Chiarelli,L.R., Fortin,R., Dolzan,M., Galizzi,A.,
            Abraham,D.J., Wang,C., Bianchi,P., Zanella,A. and Mattevi,A.
  TITLE     Structure and function of human erythrocyte pyruvate kinase.
            Molecular basis of nonspherocytic hemolytic anemia
  JOURNAL   J Biol Chem 277 (26), 23807-23814 (2002)
   PUBMED   11960989
REFERENCE   4  (residues 1 to 49)
  AUTHORS   Larsen,T.M., Benning,M.M., Wesenberg,G.E., Rayment,I. and Reed,G.H.
  TITLE     Ligand-induced domain movement in pyruvate kinase: structure of the
            enzyme from rabbit muscle with Mg2+, K+, and L-phospholactate at
            2.7 A resolution
  JOURNAL   Arch Biochem Biophys 345 (2), 199-206 (1997)
   PUBMED   9308890
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012449.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00224.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..49
                     /organism="Mycobacterium avium"
                     /db_xref="taxon:1764"
     Protein         1..>49
                     /product="pyruvate kinase"
                     /GO_function="GO:0000287 - magnesium ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0004743 - pyruvate kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0030955 - potassium ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006096 - glycolytic process [Evidence
                     IEA]"
     Region          1..>49
                     /region_name="PykF"
                     /note="Pyruvate kinase [Carbohydrate transport and
                     metabolism]; COG0469"
                     /db_xref="CDD:440237"
ORIGIN      
        1 msrrgkivct lgpatnsdel ilalveagmd varlnfshgd yadhkaaye
//
LOCUS       WP_258011113             234 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease, partial [Mycobacterium avium].
ACCESSION   WP_258011113
VERSION     WP_258011113.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium avium
  ORGANISM  Mycobacterium avium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            avium complex (MAC).
REFERENCE   1  (residues 1 to 234)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024110.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12698.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Mycobacterium avium"
                     /db_xref="taxon:1764"
     Protein         <1..234
                     /product="ABC transporter permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
     Region          47..198
                     /region_name="ABC2_membrane"
                     /note="ABC-2 type transporter; cl21474"
                     /db_xref="CDD:473876"
ORIGIN      
        1 qavlmgslll pvfllfcyqi vlgeqvhrvt gaqsvygvvp mcavisalfg slgnsvgitm
       61 drqsrllsrm wvlpihrasa itgwvmaevv rafigttlit viglamglrf tqgwpaallf
      121 llvpsivvig ftalvmamai rnngraamtw llgitfalvf vnpgatpikl fphwaqplir
      181 mqpvsppiet mralahggpi awplemtvaw avvlvavfip vavrgyrlaa easa
//
LOCUS       WP_258011174             169 aa            linear   BCT 02-MAR-2025
DEFINITION  phage minor head protein [Bacillus sp. FSL H8-0516].
ACCESSION   WP_258011174
VERSION     WP_258011174.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. FSL H8-0516
  ORGANISM  Bacillus sp. FSL H8-0516
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 169)
  AUTHORS   Vinga,I., Droge,A., Stiege,A.C., Lurz,R., Santos,M.A.,
            Daugelavicius,R. and Tavares,P.
  TITLE     The minor capsid protein gp7 of bacteriophage SPP1 is required for
            efficient infection of Bacillus subtilis
  JOURNAL   Mol Microbiol 61 (6), 1609-1621 (2006)
   PUBMED   16899078
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016148.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04233.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Bacillus sp. FSL H8-0516"
                     /db_xref="taxon:2921397"
     Protein         1..169
                     /product="phage minor head protein"
                     /calculated_mol_wt=18807
     Region          <8..33
                     /region_name="ParB_N_Srx"
                     /note="ParB N-terminal domain and sulfiredoxin
                     protein-related families; cl28891"
                     /db_xref="CDD:452888"
     Region          41..141
                     /region_name="Phage_Mu_F"
                     /note="Phage Mu protein F like protein; cl10072"
                     /db_xref="CDD:447890"
ORIGIN      
        1 mednpsgipv svvslneqde kalnialnki dgewdeyklt ellkdlevsr krarvtavte
       61 vltassvaqh esyvqypavt gkkwkhsggk knqsrdshvq ldgtiiplde efeipgsger
      121 cmfprdtqlt pkervnchca vgpvvdpvil glsaeekeei rrrvlqnme
//
LOCUS       WP_258011256            1424 aa            linear   BCT 02-MAR-2025
DEFINITION  type IV secretion system protein [Ehrlichia ruminantium].
ACCESSION   WP_258011256
VERSION     WP_258011256.1
KEYWORDS    RefSeq.
SOURCE      Ehrlichia ruminantium (heartwater rickettsia)
  ORGANISM  Ehrlichia ruminantium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rickettsiales; Anaplasmataceae; Ehrlichia.
REFERENCE   1  (residues 1 to 1424)
  AUTHORS   Li,P.L., Hwang,I., Miyagi,H., True,H. and Farrand,S.K.
  TITLE     Essential components of the Ti plasmid trb system, a type IV
            macromolecular transporter
  JOURNAL   J Bacteriol 181 (16), 5033-5041 (1999)
   PUBMED   10438776
REFERENCE   2  (residues 1 to 1424)
  AUTHORS   Liang,Y., Aoyama,T. and Oka,A.
  TITLE     Structural characterization of the virB operon on the
            hairy-root-inducing plasmid A4
  JOURNAL   DNA Res 5 (2), 87-93 (1998)
   PUBMED   9679196
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04610.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1424
                     /organism="Ehrlichia ruminantium"
                     /db_xref="taxon:779"
     Protein         1..1424
                     /product="type IV secretion system protein"
                     /GO_process="GO:0030255 - protein secretion by the type IV
                     secretion system [Evidence IEA]"
                     /calculated_mol_wt=155956
     Region          644..>882
                     /region_name="VirB6"
                     /note="Type IV secretory pathway, VirB6 component
                     [Intracellular trafficking, secretion, and vesicular
                     transport]; COG3704"
                     /db_xref="CDD:442918"
     Region          <1040..1341
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
ORIGIN      
        1 mknsiillml cfmtgcginc iegskgvsst svsvdvspvv kmrtetvkmk kgkqnvtkvt
       61 kklepywvdt gikitenqki nltiggsinm cpkdsfnprk iivpavacsn sisgvkynne
      121 siysdmkksc enahskkkek kakkpnnegw isndvrtist frlnkgdvfr vnliprtvkv
      181 tncsasalrs lgiiyysdne ifsddkctkp vraedicksg iqsfsikmgd ksdenkeknc
      241 isfpvgsggi drlqgtevfp lvdnaysphg nkvfytdgsk knwikapfiy dartiknqnn
      301 vdtlkaqcdv ikelneknii eyissnsadi lqyykeqkqy iksdvtqdti dvingfttyd
      361 incvcgvmck pnesfstsni asiltlnkdg aecsitndsd qifknttqee lekkdwtkqe
      421 wdkdvktevi aglsayfevl dpitgkgkrq yscfpsnsan gyncikdifs khvkessiks
      481 nvnytydfnn pvtlrfgiig qegqyknysg gyhlhvermc nfvdgkklym yigntpptml
      541 pgsnntvelf vkkkdgeqst sgtatytind dnsqkksgti ylgidvrgya dqfdykgmps
      601 vesdnkytvd faidrwnpnf skafvmirdf llkvlyglpg nqkvssisqa mdvvrttksk
      661 gavqhiytnq ttsgklwrgv qalctlyiif tvlgyvigvv kctkydlgvr iakiavvvgl
      721 lsqdswelfs shffslfvqg vsdlistfng eldgdnsfaf ldptigvllt gevwirfltl
      781 iitgpigwlv famiiwavfv ffvciieavi aylftivaia flatlapifi tfllfqltkt
      841 lfdswikmlv nfslqpiilf aalaflnqvm ltvlhdvtgf tvcnqcfigl slpasvtekg
      901 appdvcvmpv llpvgyasel siddavresd srdgrigflg lpfgitsvli llitanamka
      961 frgmseaisq sisgsvagig aslhaatqsl asivgldqet qsiiknaman rrstgqsdvn
     1021 issranpnpv negeslnkdg ddssnrpvtg dhdklgsssv ssgenfdsde khqvssgsry
     1081 gpvddtlins tkgqvldtds shykdngdgv kdtsgnvmdd gstktrdnvp degsttnrnd
     1141 stqdnidgkt veesvatgdg dmqgsndsdi gdrdgsssae dkvptdnenq ndndnaqqdg
     1201 snveeeshaa drhdtidsed stddtsdssv segesdvses dvessgdntt evgsntddkt
     1261 lgdddnkdes vqqnesdlge esnttdrtdt mdstdgtsds svsegesdis esdvegntse
     1321 sdsddekldt nitvdennnt ndmqdaesta ssavddssse sedvgkkrgk rdinfldgpq
     1381 krrlymdeys svkekiaghq saidvetesh ersqvkrrgk kkde
//
LOCUS       WP_258011249             404 aa            linear   BCT 02-MAR-2025
DEFINITION  SurA N-terminal domain-containing protein [Ehrlichia ruminantium].
ACCESSION   WP_258011249
VERSION     WP_258011249.1
KEYWORDS    RefSeq.
SOURCE      Ehrlichia ruminantium (heartwater rickettsia)
  ORGANISM  Ehrlichia ruminantium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rickettsiales; Anaplasmataceae; Ehrlichia.
REFERENCE   1  (residues 1 to 404)
  AUTHORS   Calabrese,A.N., Schiffrin,B., Watson,M., Karamanos,T.K., Walko,M.,
            Humes,J.R., Horne,J.E., White,P., Wilson,A.J., Kalli,A.C., Tuma,R.,
            Ashcroft,A.E., Brockwell,D.J. and Radford,S.E.
  TITLE     Inter-domain dynamics in the chaperone SurA and multi-site binding
            to its outer membrane protein clients
  JOURNAL   Nat Commun 11 (1), 2155 (2020)
   PUBMED   32358557
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 404)
  AUTHORS   Giuseppe,P.O., Von Atzingen,M., Nascimento,A.L., Zanchin,N.I. and
            Guimaraes,B.G.
  TITLE     The crystal structure of the leptospiral hypothetical protein
            LIC12922 reveals homology with the periplasmic chaperone SurA
  JOURNAL   J Struct Biol 173 (2), 312-322 (2011)
   PUBMED   20970503
REFERENCE   3  (residues 1 to 404)
  AUTHORS   Bitto,E. and McKay,D.B.
  TITLE     Crystallographic structure of SurA, a molecular chaperone that
            facilitates folding of outer membrane porins
  JOURNAL   Structure 10 (11), 1489-1498 (2002)
   PUBMED   12429090
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025010.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13624.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Ehrlichia ruminantium"
                     /db_xref="taxon:779"
     Protein         1..404
                     /product="SurA N-terminal domain-containing protein"
                     /calculated_mol_wt=45822
     Region          10..143
                     /region_name="SurA_N_3"
                     /note="SurA N-terminal domain; cl21568"
                     /db_xref="CDD:473912"
     Region          31..299
                     /region_name="prsA"
                     /note="peptidylprolyl isomerase; Provisional; PRK00059"
                     /db_xref="CDD:234605"
ORIGIN      
        1 miihmrnrti glfllifafy csnafanvkm vamvngelis sldleryiai skffyhvdsd
       61 vakdieldsl ideyiwkqea eklkvvvseq eildavnqlf vmkgsnhken hnndfksyte
      121 qqgldydmli qhvkskllwn kilmlkvvpy isvsnkeild sqdtmlspng lnifvhiqei
      181 vlpvglsdnn vtdvirslhd gisidnikkr vegllfeets inlkdvdivl anqllnakvn
      241 dvigpiktey gnliikllnr feinrefans svnlqqmyld vqeskkyvdq isllktkakc
      301 enfqniaael glpkplsfva kvkdlsvkiq snlqsldigs ivevtnndav niimlcnvtk
      361 gksddtsvsd vnmikqklym ekltmqseyl lstlkkssli ekyn
//
LOCUS       WP_258010807             306 aa            linear   BCT 02-MAR-2025
DEFINITION  P44/Msp2 family outer membrane protein [Ehrlichia ruminantium].
ACCESSION   WP_258010807
VERSION     WP_258010807.1
KEYWORDS    RefSeq.
SOURCE      Ehrlichia ruminantium (heartwater rickettsia)
  ORGANISM  Ehrlichia ruminantium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rickettsiales; Anaplasmataceae; Ehrlichia.
REFERENCE   1  (residues 1 to 306)
  AUTHORS   Braig,H.R., Zhou,W., Dobson,S.L. and O'Neill,S.L.
  TITLE     Cloning and characterization of a gene encoding the major surface
            protein of the bacterial endosymbiont Wolbachia pipientis
  JOURNAL   J Bacteriol 180 (9), 2373-2378 (1998)
   PUBMED   9573188
REFERENCE   2  (residues 1 to 306)
  AUTHORS   Oberle,S.M. and Barbet,A.F.
  TITLE     Derivation of the complete msp4 gene sequence of Anaplasma
            marginale without cloning
  JOURNAL   Gene 136 (1-2), 291-294 (1993)
   PUBMED   8294020
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01617.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Ehrlichia ruminantium"
                     /db_xref="taxon:779"
     Protein         1..306
                     /product="P44/Msp2 family outer membrane protein"
                     /calculated_mol_wt=34079
     Region          39..306
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mvkfsclgfa lslvtlvmah nafssplpvd fsnesemvgf ytsgqysiev pkfsaisaky
       61 khekqdkelt lfslkeente lklndkdqfr kgynpvynrn ytgfsgaigy sggglriele
      121 gaftkfdvdk qkykfqdnyr yfalskdeei sgqpdkptpt ppepapqpqp qpqpspkttt
      181 gynyvtakne glsiisltln acydviigns qlipsvcigi gqgitnflgv iniktiykak
      241 vgvgfllspk tiifvngyyv kvpndsfknv siqyqhelek dpkhiepiif fnsdyyggev
      301 glrfil
//
LOCUS       WP_258011298             263 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Ralstonia
            solanacearum].
ACCESSION   WP_258011298
VERSION     WP_258011298.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia solanacearum
  ORGANISM  Ralstonia solanacearum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Ralstonia; Ralstonia
            solanacearum species complex.
REFERENCE   1  (residues 1 to 263)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Ralstonia solanacearum"
                     /db_xref="taxon:305"
     Protein         <1..263
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..196
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            28..61
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 vvetmagind sskkiadiig viegiafqtn ilalnaavea arageqgrgf avvagevrsl
       61 aqrsagaake ikalisdsvg rvengttlva eagtvidevv vavkrvtgim geisaaseaq
      121 segiaqvnla vaqmdevtqq naalveqaaa aamslqeqad glrgtvaafr tradapaaaa
      181 tqptrsaaav akaparggsr arhpvrkaav vlpgtaskaa spssaaavsn trqaaaeava
      241 qapkkpvpkl vaagggesdw etf
//
LOCUS       WP_258011367             356 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase TerL endonuclease subunit, partial [Bacillus
            thuringiensis].
ACCESSION   WP_258011367
VERSION     WP_258011367.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 356)
  AUTHORS   Xu,R.G., Jenkins,H.T., Chechik,M., Blagova,E.V., Lopatina,A.,
            Klimuk,E., Minakhin,L., Severinov,K., Greive,S.J. and Antson,A.A.
  TITLE     Viral genome packaging terminase cleaves DNA using the canonical
            RuvC-like two-metal catalysis mechanism
  JOURNAL   Nucleic Acids Res 45 (6), 3580-3590 (2017)
   PUBMED   28100693
REFERENCE   2  (residues 1 to 356)
  AUTHORS   Hilbert,B.J., Hayes,J.A., Stone,N.P., Duffy,C.M., Sankaran,B. and
            Kelch,B.A.
  TITLE     Structure and mechanism of the ATPase that powers viral genome
            packaging
  JOURNAL   Proc Natl Acad Sci U S A 112 (29), E3792-E3799 (2015)
   PUBMED   26150523
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042863.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20441.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         <1..356
                     /product="terminase TerL endonuclease subunit"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
     Region          <1..351
                     /region_name="YmfN"
                     /note="Phage terminase-like protein, large subunit,
                     contains N-terminal HTH domain [Mobilome: prophages,
                     transposons]; COG4626"
                     /db_xref="CDD:443665"
ORIGIN      
        1 elhaqenmdm ydnlksaqis reqpmmlnis tagkgassvg mrvykyaklv lenddddslf
       61 vaiwepnkny dwedrkvwem vnpnigvsvt meqleiefkk akqsahskae flskhlnvfv
      121 ngadnyfehd qvqhvlvedl gdltgeicyl gldlskttdl tcvslnfpsh ddegrsiikv
      181 kqmyflpnen idfkekednv pytdmvergf atfcdgkmid qdqvmeyive cmdlydvqqi
      241 nydpamsqkl ieklenlgle ciavnqypnv mnamlddsei liyekrlftd nplfvycaln
      301 vvvvtningm kapskrqskk kidgfvaflv ahketmmimd dvseegmdel igeiyr
//
LOCUS       WP_258011402             177 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Burkholderia
            thailandensis].
ACCESSION   WP_258011402
VERSION     WP_258011402.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia thailandensis
  ORGANISM  Burkholderia thailandensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 177)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Burkholderia thailandensis"
                     /db_xref="taxon:57975"
     Protein         <1..177
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..153
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            1..32
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 nilalnaave aarageqgrg favvagevrs laqrsataar eiktlieqst ervgagsalv
       61 ddagriigei vesvrqvtgi vseiasasne qsvgieqvnh avaqmdnvtq qnaalveeas
      121 aaahalaeqa ralhgavaaf tlqgerader gnardtqpai gavlasqrap lpaatpa
//
LOCUS       WP_258011414             112 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Stenotrophomonas maltophilia].
ACCESSION   WP_258011414
VERSION     WP_258011414.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (residues 1 to 112)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..>112
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>112
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 makgkfertk phvnvgtigh vdhgkttlta altkigaerf ggefkdyssi daapeekarg
       61 itistahvey espirhyahv dcpghadyvk nmitgaaqmd gailvcsaad gp
//
LOCUS       WP_258011433             246 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA translocase FtsK, partial [Burkholderia thailandensis].
ACCESSION   WP_258011433
VERSION     WP_258011433.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia thailandensis
  ORGANISM  Burkholderia thailandensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 246)
  AUTHORS   Sivanathan,V., Allen,M.D., de Bekker,C., Baker,R.,
            Arciszewska,L.K., Freund,S.M., Bycroft,M., Lowe,J. and
            Sherratt,D.J.
  TITLE     The FtsK gamma domain directs oriented DNA translocation by
            interacting with KOPS
  JOURNAL   Nat Struct Mol Biol 13 (11), 965-972 (2006)
   PUBMED   17057717
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020952.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09397.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Burkholderia thailandensis"
                     /db_xref="taxon:57975"
     Protein         <1..246
                     /product="DNA translocase FtsK"
     Region          <16..243
                     /region_name="FtsK"
                     /note="DNA segregation ATPase FtsK/SpoIIIE or related
                     protein [Cell cycle control, cell division, chromosome
                     partitioning]; COG1674"
                     /db_xref="CDD:441280"
ORIGIN      
        1 rdaaakekki gnpfsltped peplstlplv vvvideladl mmvagkkiee liarlaqkar
       61 aagihlilat qrpsvdvitg likaniptrv afqvsskids rtildqmgae sllgqgdmlf
      121 lppgtgypqr vhgafvadee vhriveylkq fgepqyeegi ldgpsaegga qdlfgeapda
      181 eadplydeav afvvrtrras issvqrqlri gynraarlve qmeaaglvsp mgingsrevl
      241 applpe
//
LOCUS       WP_258011456             144 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Burkholderia thailandensis].
ACCESSION   WP_258011456
VERSION     WP_258011456.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia thailandensis
  ORGANISM  Burkholderia thailandensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 144)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Burkholderia thailandensis"
                     /db_xref="taxon:57975"
     Protein         <1..144
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <1..131
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 yrlvlcaspa ylaehgapae padlaahecl gfsysgqpaa lewpfesaqg qqhsvrvrsr
       61 lavnngaalr maaldglgii lqpaelvrdd laagrlvrll pghepparpi hvlyspdrqp
      121 tpklrsfida viaafgeqag dgrt
//
LOCUS       WP_258011470             160 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Burkholderia
            thailandensis].
ACCESSION   WP_258011470
VERSION     WP_258011470.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia thailandensis
  ORGANISM  Burkholderia thailandensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 160)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Burkholderia thailandensis"
                     /db_xref="taxon:57975"
     Protein         <1..160
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..135
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
ORIGIN      
        1 aveaaragee grgfavvage vralaqrsaq sakeikllie esvaqidggs elverageam
       61 rsvsasierv aqtmteitaa sveqsagieq vnqavtqmeq ltqqnaalve evaaaagsln
      121 eqteqlqqsv svfelgdare rrpaagaara gaaapqraga
//
LOCUS       WP_258011482             370 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DNA glycosylase AlkZ-like family protein
            [Stenotrophomonas].
ACCESSION   WP_258011482
VERSION     WP_258011482.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas
  ORGANISM  Stenotrophomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae.
REFERENCE   1  (residues 1 to 370)
  AUTHORS   Bradley,N.P., Washburn,L.A., Christov,P.P., Watanabe,C.M.H. and
            Eichman,B.F.
  TITLE     Escherichia coli YcaQ is a DNA glycosylase that unhooks DNA
            interstrand crosslinks
  JOURNAL   Nucleic Acids Res 48 (13), 7005-7017 (2020)
   PUBMED   32409837
REFERENCE   2  (residues 1 to 370)
  AUTHORS   Mullins,E.A., Warren,G.M., Bradley,N.P. and Eichman,B.F.
  TITLE     Structure of a DNA glycosylase that unhooks interstrand cross-links
  JOURNAL   Proc Natl Acad Sci U S A 114 (17), 4400-4405 (2017)
   PUBMED   28396405
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017984.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06224.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Stenotrophomonas"
                     /db_xref="taxon:40323"
     Protein         1..370
                     /product="DNA glycosylase AlkZ-like family protein"
                     /GO_function="GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA]"
                     /GO_process="GO:0036297 - interstrand cross-link repair
                     [Evidence IEA]"
                     /calculated_mol_wt=42165
     Region          9..370
                     /region_name="HTH_42"
                     /note="Winged helix DNA-binding domain; cl19833"
                     /db_xref="CDD:473220"
ORIGIN      
        1 marlynaamp atptlddlrr havartlfkp ttlltairrl gfvqadpira paraqdltlr
       61 hrvkdyragd lerrytrlpv eedclvnygf lprehlalmh prvsrrawda etqrraadvl
      121 afvrergsvh prevdqafah grvtnywggt snasthlldg mhyrgllrvq rrdsgtriya
      181 vaehaeadas eqaqieraaa lidvvvrkya plpsasltyl vrllgygaph laeqtrqalk
      241 lakqqlasct ldgttwywpa denprsrrha pddqvrllap fdpvvwdrrr fellwdwvyk
      301 feaytpapkr qygyyalpvl whdqvvgwan lsardgelas svgyagksla rdkvfrgale
      361 delqrmaefl
//
LOCUS       WP_258011488             176 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Burkholderia
            thailandensis].
ACCESSION   WP_258011488
VERSION     WP_258011488.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia thailandensis
  ORGANISM  Burkholderia thailandensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 176)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Burkholderia thailandensis"
                     /db_xref="taxon:57975"
     Protein         <1..176
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..142
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            1..32
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 nilalnaave aarageqgrg favvagevrs laqrsataak eikqlidasv ervnngsalv
       61 gqagetmtei lqavrrvtdi mgeiaaasee qssgisqvgr avtqmdemtq qnaalveeaa
      121 aaasslqeqa arlresvsaf qvgdgaadgg taaagaaasg gpnaaassgr vepala
//
LOCUS       WP_258011122             272 aa            linear   BCT 02-MAR-2025
DEFINITION  exodeoxyribonuclease V subunit gamma, partial [Mycobacterium
            avium].
ACCESSION   WP_258011122
VERSION     WP_258011122.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium avium
  ORGANISM  Mycobacterium avium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            avium complex (MAC).
REFERENCE   1  (residues 1 to 272)
  AUTHORS   Cheng,K., Wilkinson,M., Chaban,Y. and Wigley,D.B.
  TITLE     A conformational switch in response to Chi converts RecBCD from
            phage destruction to DNA repair
  JOURNAL   Nat Struct Mol Biol 27 (1), 71-77 (2020)
   PUBMED   31907455
REFERENCE   2  (residues 1 to 272)
  AUTHORS   Smith,G.R., Amundsen,S.K., Dabert,P. and Taylor,A.F.
  TITLE     The initiation and control of homologous recombination in
            Escherichia coli
  JOURNAL   Philos Trans R Soc Lond B Biol Sci 347 (1319), 13-20 (1995)
   PUBMED   7746848
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016169.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04257.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Mycobacterium avium"
                     /db_xref="taxon:1764"
     Protein         1..>272
                     /product="exodeoxyribonuclease V subunit gamma"
                     /EC_number="3.1.11.5"
     Region          2..>176
                     /region_name="RecC"
                     /note="Scaffold subunit RecC of the DNA repair enzyme
                     RecBCD (exonuclease V) [Replication, recombination and
                     repair]; COG1330"
                     /db_xref="CDD:440941"
ORIGIN      
        1 mplhlhraer tdlladglga llanppadpf alelvvvpar gverwlsqrl shvlgrardg
       61 dgvcagvqfr spgsliaeit gtaeddpwsp dalawpllea idcsldepwc rtlathlghf
      121 hsgaeaelrr trryeaarrl aglfagyarq rprllvdwld gdpgdldedl rwqpplwrap
      181 ggpggprppp pwgarttppr prrgpphppp pppllrghpp rgagagglgp pgapphppps
      241 rrrppdprwr ralftsptph tprahrisas ac
//
LOCUS       WP_258011424              34 aa            linear   BCT 02-MAR-2025
DEFINITION  tail spike protein, partial [Salmonella enterica].
ACCESSION   WP_258011424
VERSION     WP_258011424.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 34)
  AUTHORS   Steinbacher,S., Baxa,U., Miller,S., Weintraub,A., Seckler,R. and
            Huber,R.
  TITLE     Crystal structure of phage P22 tailspike protein complexed with
            Salmonella sp. O-antigen receptors
  JOURNAL   Proc Natl Acad Sci U S A 93 (20), 10584-10588 (1996)
   PUBMED   8855221
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020812.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09251.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..34
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         1..>34
                     /product="tail spike protein"
     Region          <1..>32
                     /region_name="PhageP22-tail"
                     /note="Salmonella phage P22 tail-spike; pfam09251"
                     /db_xref="CDD:312676"
ORIGIN      
        1 mwdcfnlwad ignekdrpgn yslseypvhq lptt
//
LOCUS       WP_258011571              59 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: response regulator [Stenotrophomonas].
ACCESSION   WP_258011571
VERSION     WP_258011571.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas
  ORGANISM  Stenotrophomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae.
REFERENCE   1  (residues 1 to 59)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..59
                     /organism="Stenotrophomonas"
                     /db_xref="taxon:40323"
     Protein         1..59
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=6247
     Region          1..>59
                     /region_name="AtoC"
                     /note="DNA-binding transcriptional response regulator,
                     NtrC family, contains REC, AAA-type ATPase, and a Fis-type
                     DNA-binding domains [Signal transduction mechanisms];
                     COG2204"
                     /db_xref="CDD:441806"
ORIGIN      
        1 mtqrililed qpfqrgylan lfgssdgvqv dacedveaai alcacqaydl vvsdllmpg
//
LOCUS       WP_258011647             312 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            thailandensis].
ACCESSION   WP_258011647
VERSION     WP_258011647.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia thailandensis
  ORGANISM  Burkholderia thailandensis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 312)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Burkholderia thailandensis"
                     /db_xref="taxon:57975"
     Protein         <1..312
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          2..>201
                     /region_name="EntF"
                     /note="seryl-AMP synthase component of non-ribosomal
                     peptide synthetase [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG1020"
                     /db_xref="CDD:440643"
ORIGIN      
        1 aramaldaha tlpmllhaal naafyratga tdqpvgvlas treltgdaae ralglfinav
       61 vvrtrlsgad tpaalvaavr daalaayaha dapfgdvvaa lrapravngn plfqvmfnyl
      121 rptgaaardw aglavdefnd vrhrvvfele ldivehpdgr vtgafsyate rvdgafvaal
      181 aadyldvvrg fvdaparalg acaarfalda hdvcaplspp aaaanasaaa haaraladvw
      241 raalghaapa pddnvfeaga tsfdvvrfvd aarsagfala iadvfaapsf aalgeraahi
      301 agqpatqard ad
//
LOCUS       WP_258011687             445 aa            linear   BCT 02-MAR-2025
DEFINITION  3'-5' exonuclease [Salmonella enterica].
ACCESSION   WP_258011687
VERSION     WP_258011687.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 445)
  AUTHORS   Ozawa,K., Horan,N.P., Robinson,A., Yagi,H., Hill,F.R., Jergic,S.,
            Xu,Z.Q., Loscha,K.V., Li,N., Tehei,M., Oakley,A.J., Otting,G.,
            Huber,T. and Dixon,N.E.
  TITLE     Proofreading exonuclease on a tether: the complex between the E.
            coli DNA polymerase III subunits alpha, epsilon, theta; and beta
            reveals a highly flexible arrangement of the proofreading domain
  JOURNAL   Nucleic Acids Res 41 (10), 5354-5367 (2013)
   PUBMED   23580545
REFERENCE   2  (residues 1 to 445)
  AUTHORS   Viswanathan,M. and Lovett,S.T.
  TITLE     Exonuclease X of Escherichia coli. A novel 3'-5' DNase and Dnaq
            superfamily member involved in DNA repair
  JOURNAL   J Biol Chem 274 (42), 30094-30100 (1999)
   PUBMED   10514496
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024754.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13361.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         1..445
                     /product="3'-5' exonuclease"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=51534
     Region          <26..435
                     /region_name="UvrD"
                     /note="Superfamily I DNA or RNA helicase [Replication,
                     recombination and repair]; COG0210"
                     /db_xref="CDD:439980"
ORIGIN      
        1 mywwlreqit neneeestls fmtinrlaey ivrsnihilr alratypfvf vdefqdttyg
       61 qydfllsafg qtkttittvg dykqrimgwa gaktdafhqf eydfsatryq lqlnhrsspe
      121 lvrlqhivar eiehgacmaq tkvpqkidkg ctfilnsrsv tsevhyiakw isrnmqsrgl
      181 rprdyailar qrpenyydql nqsllshhlk lrnesvkign ttlqdlltee ftilfsnllr
      241 fvigekepqi wnqlyssieq lrgispddir ahkavenqlv nlkrsiqtll eqpystttaq
      301 pimeriisfi spsdmrkafs rynagdllni tlealkihfl qcvsntsswq dcmdefdgvd
      361 hiplmtihks kglefdtvif iglddnawws hqpgnpesms tffvalsrak qravfsfcse
      421 rgerqklsds yalleksgvk eynin
//
LOCUS       WP_258011689             275 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Salmonella enterica].
ACCESSION   WP_258011689
VERSION     WP_258011689.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024573.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13175.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         1..275
                     /product="AAA family ATPase"
                     /calculated_mol_wt=30685
     Region          2..>75
                     /region_name="YbjD"
                     /note="Predicted ATP-dependent endonuclease of the OLD
                     family, contains P-loop ATPase and TOPRIM domains
                     [Replication, recombination and repair]; COG3593"
                     /db_xref="CDD:442812"
     Region          26..>222
                     /region_name="AAA_21"
                     /note="AAA domain, putative AbiEii toxin, Type IV TA
                     system; pfam13304"
                     /db_xref="CDD:433102"
ORIGIN      
        1 miesvkltnf rsfgpdgqki tldhklttli gangtgktav lqalqrlfgv tseqrlisrq
       61 dfhiptseth apdirtlsle aiiafpeldd eqgdhsaipe ffrsmsiade ngrlkcrlrl
      121 daqwdddgti dgyvtsqfha vtcwgndepd dsdfhkvrpg drakiqliyi patrsataqv
      181 ssflkgrlwk ainwssqvra sfaekaheln safegesaid titgkltqrw qqlhsagtds
      241 tpkfrpvdvr feefvrkvvf cyilmkaaei aalks
//
LOCUS       WP_258011688             181 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein [Salmonella enterica].
ACCESSION   WP_258011688
VERSION     WP_258011688.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 181)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         1..181
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=20396
     Region          19..>109
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            37..43
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350690"
ORIGIN      
        1 mkfispeqwc pkeiddleps awnalrtpds vsviagpgag kteflaqkav ylletgicpp
       61 nqqilaisfk tdaaknladr vklrcseels hrlvsitfda ftkslvdrfr lalpqewrps
      121 kkysisypnk kdvaqfwarr qhrvsssdar aieyetrhmd tasfeshvvg syripentsp
      181 p
//
LOCUS       WP_258011728              60 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Salmonella
            enterica].
ACCESSION   WP_258011728
VERSION     WP_258011728.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 60)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 60)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 60)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 60)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..60
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         1..60
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=6242
     Region          2..>50
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            5..12
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213179"
ORIGIN      
        1 mgiigtsgsg ksslikalsn sshcytgtvk lnnaditpis eddiqnclay hfsnilekit
//
LOCUS       WP_258011875             281 aa            linear   BCT 02-MAR-2025
DEFINITION  histidine kinase [Vibrio cholerae].
ACCESSION   WP_258011875
VERSION     WP_258011875.1
KEYWORDS    RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 281)
  AUTHORS   Grebe,T.W. and Stock,J.B.
  TITLE     The histidine protein kinase superfamily
  JOURNAL   Adv Microb Physiol 41, 139-227 (1999)
   PUBMED   10500846
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019350.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07730.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Vibrio cholerae"
                     /db_xref="taxon:666"
     Protein         1..281
                     /product="histidine kinase"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=31882
     Region          <6..275
                     /region_name="PRK10600"
                     /note="nitrate/nitrite two-component system sensor
                     histidine kinase NarX"
                     /db_xref="CDD:182581"
ORIGIN      
        1 mqnlscnlcf dnektfienl seitiklkds nhdygkivis nnikscinve neqliiafse
       61 lltqslsvfy kvqqdqqlli lkerntiare lhdsiaqsls clkiklsilq mdlsnldeeq
      121 isiigemree vnvaycqlre llttfrlrld glgflpalen tvkeynkkig tkinfsyeip
      181 ankisihhsi hliqiirell nniykhaqas dvtldlsmkd ndislvildd gcgfstsqen
      241 sryglkiigd raqslsgkwd iisspgkgte fyltfpiysr v
//
LOCUS       WP_258011864            1004 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: EAL domain-containing protein [Vibrio].
ACCESSION   WP_258011864
VERSION     WP_258011864.1
KEYWORDS    RefSeq.
SOURCE      Vibrio
  ORGANISM  Vibrio
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae.
REFERENCE   1  (residues 1 to 1004)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Vibrio"
                     /db_xref="taxon:662"
     Protein         1..1004
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=113357
     Region          5..281
                     /region_name="PurR"
                     /note="DNA-binding transcriptional regulator, LacI/PurR
                     family [Transcription]; COG1609"
                     /db_xref="CDD:441217"
     Region          421..994
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mptclssrrv tigvvmpmls gfymgeisat frqlaeqegv nliiirsgds rdfslpialh
       61 qmdalvvvlh aaantyveaa trldipvism gasysplpve qfsslqssgv eqlyqwlvsl
      121 ghqyigfcgd lfvtdirsrf nafkqcvery hhrtfdtsql fsvencqlag grqaaeewlt
      181 lssnrctavi catdqnalgm ieqlklhnid ipndlavvgi dnifsgcris pplttvdqql
      241 eqltravfqr aleriagvgl srevsyieqs lvirqscgss pldksleldr etvrhallye
      301 alhspselfd nlyslakggf qsildaqtly qcqlkraelh ryeqyrltsq rslissdelk
      361 qqesdpqdvr nlpyleakea svitllpvnr geqgdwdvvt vvekqscers iaqsamfyny
      421 ldilslfier dalietsqqr hkksqqllqq lkvvssssnd giwewdlqqq rlywngrlsv
      481 mlrftqsnqs gvidpqlfln rihpedivaf eqmiqehlnt mspfkmtlrl srddghyiwv
      541 qmngsairnh hglpvrivgs miditeqqes adkihqmayf dgltgianrr kvmeviekhi
      601 keqpeqprav mmmdlnrfkm indtfghqvg dallrhvaea ltkslrsqdl igrfggdefv
      661 ffcdvvnahq aselalrllr avekpmcyqn ielvsqasig vafypsqgin adeliknadi
      721 amyrakqmgg gkvmhyekkm hqpfeshlqt ehllskaieq geikvhyqpl ydnrskqics
      781 vealarwssp tlgvvppnqf iavaensflm mklgdciidr vcqdvvsspw lrslhhisvn
      841 isarqlvhsh ftrhlldkin ayrlppslfc leitetaais dkemsyrtlr elqsagfsls
      901 lddfgtgfss lsllkglpik evkidrsfin disekpsnla fikglvsmvq slgfrvvaeg
      961 vetllqmevl seldidiiqg fyfskpksla eleaevnkeq vset
//
LOCUS       WP_258012153             247 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Stenotrophomonas
            maltophilia].
ACCESSION   WP_258012153
VERSION     WP_258012153.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (residues 1 to 247)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         <1..>247
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <11..247
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(54..55,58..59,62,65..66,68..69,72,75..76,79,82..83,
                     86..87,90,93..94,96..97,101,103..104,107,110..111,
                     114..115,118,121,124..125,128,132,135,142,146,149,
                     152..153,156,159..160,163..164,166..167,170..171,184..185,
                     188,191..192,195,198..199,201..202,205..206,209,212..213,
                     216,219..220,222..223,226..227,229..230,233,236..237,240,
                     243..244)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            124..157
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 rmrddanttv aqltqivgqi qasassitla ageiasgnxd lsrrteqqaa nleetaasme
       61 eltstvrqna eharqanqla igaxgvasqg gxvvgqvvxt msaieasskk iaeiixvidg
      121 iafqtnilal naaveaarag eqgrgfavva sevrtlaqrs aaaakeikgl iddsvgkvae
      181 gsslvhqags tmgeivasvq rvtdimaeis aasqeqsagi eqvnqtvvqm dettqqnaal
      241 veeataa
//
LOCUS       WP_258012219             409 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase, partial [Microcystis aeruginosa].
ACCESSION   WP_258012219
VERSION     WP_258012219.1
KEYWORDS    RefSeq.
SOURCE      Microcystis aeruginosa
  ORGANISM  Microcystis aeruginosa
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Oscillatoriophycideae; Chroococcales; Microcystaceae; Microcystis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Microcystis aeruginosa"
                     /db_xref="taxon:1126"
     Protein         <1..409
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          9..72
                     /region_name="PPC"
                     /note="Bacterial pre-peptidase C-terminal domain;
                     pfam04151"
                     /db_xref="CDD:427748"
     Region          150..405
                     /region_name="Peptidases_S8_Subtilisin_like"
                     /note="Peptidase S8 family domain in Subtilisin-like
                     proteins; cd07473"
                     /db_xref="CDD:173799"
     Site            order(158,213,274..276,304,372)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:173799"
     Site            order(158,213,372)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173799"
ORIGIN      
        1 hrlgrkhrtn dyyrftlans snfnlgltgl tadadvqlln ssgsviassv ragtasesit
       61 sqlsagtyyi rvypysgntn ynlavsatta tvtpgysais gyglvnaaka vagalnqspf
      121 advptfggan dwgvnlvnap eawargytgq gvvvavldtg vdrnhadlag niwtnageia
      181 ndgldndgng yvddvygwnf angnnntldg nrhgthvagt iaavnngfga tgvaynsrim
      241 pvkvlsdsgs gsysgvaqgi ryavdngadv inmslgggst dsavqsalqy assrgvivvm
      301 aagnagaaqp gypasnatsw glavgavnss nqmasfsnra gsnssmryvt apgvqvystl
      361 pnggygflsg tsmaaphvag vvalmlsanp nltdaqvrqi itttagnva
//
LOCUS       WP_258012230             340 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4127 family protein [Microcystis aeruginosa].
ACCESSION   WP_258012230
VERSION     WP_258012230.1
KEYWORDS    RefSeq.
SOURCE      Microcystis aeruginosa
  ORGANISM  Microcystis aeruginosa
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Oscillatoriophycideae; Chroococcales; Microcystaceae; Microcystis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024941.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13552.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Microcystis aeruginosa"
                     /db_xref="taxon:1126"
     Protein         1..340
                     /product="DUF4127 family protein"
                     /calculated_mol_wt=38981
     Region          <50..303
                     /region_name="DUF4127"
                     /note="Protein of unknown function (DUF4127); pfam13552"
                     /db_xref="CDD:404442"
ORIGIN      
        1 mnrkisavvc amgdsqkhss kdvretmqtr lynlldkynl salkqpitwg adelvamgia
       61 qtlpktkvrv risnketemw ydgrrppeel vteklpavgl eksetgwdfe vailtrrqng
      121 siddyqkddq eqaqldeqfl aqyknysseq raklviidgr lfngawnats vlpyddllaf
      181 gswgtfgncv gstlavakil fyaknpaaqr qlyleaiahd vfangykevq rleepksfcn
      241 qlknqtgitf nhydgydnpa tvkkvfevln rhvnarmqeh ftrlplvnhr vfritpqfwr
      301 tfesevhiwp rlpeeihkvg iyrtdleaia fnpslgdqfv
//
LOCUS       WP_258012242             135 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Microcystis aeruginosa].
ACCESSION   WP_258012242
VERSION     WP_258012242.1
KEYWORDS    RefSeq.
SOURCE      Microcystis aeruginosa
  ORGANISM  Microcystis aeruginosa
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Oscillatoriophycideae; Chroococcales; Microcystaceae; Microcystis.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024751.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13358.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Microcystis aeruginosa"
                     /db_xref="taxon:1126"
     Protein         <1..135
                     /product="transposase"
     Region          <7..94
                     /region_name="transpos_IS630"
                     /note="IS630 family transposase; NF033545"
                     /db_xref="CDD:468076"
ORIGIN      
        1 hqmkylvder ypdaqkirvi qdnlnthvka slykafelee akrildklef hytpkhgswl
       61 nmaeielsvl nrqcldrrip dmdslkqeik aweenrneks nsvdwrftta darintisln
      121 enytsnlnpp lsspf
//
LOCUS       WP_258012272             197 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Microcystis
            aeruginosa].
ACCESSION   WP_258012272
VERSION     WP_258012272.1
KEYWORDS    RefSeq.
SOURCE      Microcystis aeruginosa
  ORGANISM  Microcystis aeruginosa
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Oscillatoriophycideae; Chroococcales; Microcystaceae; Microcystis.
REFERENCE   1  (residues 1 to 197)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 197)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 197)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 197)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Microcystis aeruginosa"
                     /db_xref="taxon:1126"
     Protein         1..197
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=22583
     Region          <6..190
                     /region_name="PvdE"
                     /note="ABC-type siderophore export system, fused ATPase
                     and permease components [Inorganic ion transport and
                     metabolism]; COG4615"
                     /db_xref="CDD:443659"
ORIGIN      
        1 msfswqpgel ifiiggngsg kstlaklitg lypplsgaiy lngkritqdn vewyrqhfsa
       61 ifsdfylfds flgfdrpnld qevenylmql qlahkvtvkn gvlsttelsq gqrkrlallt
      121 ayledrpiyv fdewaadqep rfrelfykqi llqlkergki vivishdery fhladhiikl
      181 dygaveseqt vqqsgsl
//
LOCUS       WP_258012303             177 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY-family carbohydrate kinase, partial [Salmonella enterica].
ACCESSION   WP_258012303
VERSION     WP_258012303.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 177)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 177)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02782.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         <1..>177
                     /product="FGGY-family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <1..>177
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 yynrdkggwp edfyetigcd dvfdkipgrv ldlgtpvgtl gtipaqllgl rpgipvaqgl
       61 gdawagqigl gvlapgsmal itgsshvltg qsdteihgeg ffgaysdavm pgqytvegsq
      121 vstgsvlkwf kanfaadyta aaekiglnpy dvlneqsrni rpgsdgliin eyfqgnr
//
LOCUS       WP_258012438              71 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Paenibacillus sp. F4].
ACCESSION   WP_258012438
VERSION     WP_258012438.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. F4
  ORGANISM  Paenibacillus sp. F4
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024059.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12645.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Paenibacillus sp. F4"
                     /db_xref="taxon:357385"
     Protein         1..71
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=8254
ORIGIN      
        1 mekegaprfm sddefmklve laqtesdvea mnaifqyfdp ditrlskfir mpkedaiqsm
       61 ktellefimk k
//
LOCUS       WP_258012496             106 aa            linear   BCT 02-MAR-2025
DEFINITION  GH32 C-terminal domain-containing protein [Paenibacillus sp. F4].
ACCESSION   WP_258012496
VERSION     WP_258012496.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. F4
  ORGANISM  Paenibacillus sp. F4
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 106)
  AUTHORS   Alberto,F., Bignon,C., Sulzenbacher,G., Henrissat,B. and Czjzek,M.
  TITLE     The three-dimensional structure of invertase (beta-fructosidase)
            from Thermotoga maritima reveals a bimodular arrangement and an
            evolutionary relationship between retaining and inverting
            glycosidases
  JOURNAL   J Biol Chem 279 (18), 18903-18910 (2004)
   PUBMED   14973124
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019849.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08244.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Paenibacillus sp. F4"
                     /db_xref="taxon:357385"
     Protein         1..106
                     /product="GH32 C-terminal domain-containing protein"
                     /calculated_mol_wt=11933
     Region          <2..106
                     /region_name="SacC"
                     /note="Sucrose-6-phosphate hydrolase SacC, GH32 family
                     [Carbohydrate transport and metabolism]; COG1621"
                     /db_xref="CDD:441228"
ORIGIN      
        1 mrvseeqetl vgyasetqev yvdgtrsgcs dfheefagrh afpletaenr ldlhiyvdrs
       61 sievffnhgq vvitdlifpd aeskgleift adeqitlfsl elyalk
//
LOCUS       WP_258012511             302 aa            linear   BCT 02-MAR-2025
DEFINITION  GH25 family lysozyme [Paenibacillus sp. F4].
ACCESSION   WP_258012511
VERSION     WP_258012511.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. F4
  ORGANISM  Paenibacillus sp. F4
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 302)
  AUTHORS   Moroz,O.V., Blagova,E., Taylor,E., Turkenburg,J.P., Skov,L.K.,
            Gippert,G.P., Schnorr,K.M., Ming,L., Ye,L., Klausen,M., Cohn,M.T.,
            Schmidt,E.G.W., Nymand-Grarup,S., Davies,G.J. and Wilson,K.S.
  TITLE     Fungal GH25 muramidases: New family members with applications in
            animal nutrition and a crystal structure at 0.78A resolution
  JOURNAL   PLoS One 16 (3), e0248190 (2021)
   PUBMED   33711051
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 302)
  AUTHORS   Martinez-Fleites,C., Korczynska,J.E., Davies,G.J., Cope,M.J.,
            Turkenburg,J.P. and Taylor,E.J.
  TITLE     The crystal structure of a family GH25 lysozyme from Bacillus
            anthracis implies a neighboring-group catalytic mechanism with
            retention of anomeric configuration
  JOURNAL   Carbohydr Res 344 (13), 1753-1757 (2009)
   PUBMED   19595298
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013357.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01183.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Paenibacillus sp. F4"
                     /db_xref="taxon:357385"
     Protein         1..302
                     /product="GH25 family lysozyme"
                     /GO_function="GO:0003796 - lysozyme activity [Evidence
                     IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /GO_process="GO:0016998 - cell wall macromolecule
                     catabolic process [Evidence IEA]"
                     /calculated_mol_wt=32406
     Region          7..190
                     /region_name="Acm"
                     /note="Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25
                     family [Cell wall/membrane/envelope biogenesis]; COG3757"
                     /db_xref="CDD:442971"
     Region          226..292
                     /region_name="Cu_amine_oxidN1"
                     /note="Copper amine oxidase N-terminal domain; pfam07833"
                     /db_xref="CDD:400265"
ORIGIN      
        1 mpsskpvkgs qgksyrdktf ignaqaarav gvlvgayhyv ddsaktpeda rkeaanfvsa
       61 insaggiasf dlppvmdyes nksglskaal tavartflae verltgvrpi vytypsfign
      121 fsglsdyplw iarysatqvp pgasgwsrwd fwqysngsag gtlpsgtrkv agiagpvdln
      181 efdgtadelr trfrkktsvp keepaivadg sfqingenvg kallfdgknh vplrvlanal
      241 giplrwdnak kvaylnnrkl qsvklvegta yvqlqpiaes ygaeiswdak nkiavlktkg
      301 de
//
LOCUS       WP_258012622            1368 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-ketoacyl synthase N-terminal-like domain-containing protein
            [Paenibacillus sp. F4].
ACCESSION   WP_258012622
VERSION     WP_258012622.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. F4
  ORGANISM  Paenibacillus sp. F4
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 1368)
  AUTHORS   Huang,W., Jia,J., Edwards,P., Dehesh,K., Schneider,G. and
            Lindqvist,Y.
  TITLE     Crystal structure of beta-ketoacyl-acyl carrier protein synthase II
            from E.coli reveals the molecular architecture of condensing
            enzymes
  JOURNAL   EMBO J 17 (5), 1183-1191 (1998)
   PUBMED   9482715
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012337.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00109.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1368
                     /organism="Paenibacillus sp. F4"
                     /db_xref="taxon:357385"
     Protein         1..1368
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /calculated_mol_wt=150992
     Region          19..558
                     /region_name="A_NRPS_MycA_like"
                     /note="The adenylation domain of nonribosomal peptide
                     synthetases (NRPS) similar to mycosubtilin synthase
                     subunit A (MycA); cd05908"
                     /db_xref="CDD:341234"
     Site            order(169,172..177,179..180)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341234"
     Site            order(172,294..295,322..327,434,445,448,459,543)
                     /site_type="other"
                     /note="putative AMP binding site [chemical binding]"
                     /db_xref="CDD:341234"
     Region          581..654
                     /region_name="AcpP"
                     /note="Acyl carrier protein [Lipid transport and
                     metabolism]; COG0236"
                     /db_xref="CDD:440006"
     Region          673..>1203
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          <1213..>1342
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
ORIGIN      
        1 meqfqtliei iqdranrdeh gitfisgdkq eeyvsyskll eqalqvlhel qekgiqpgde
       61 limqiddnht fvnvfwgcll ggivpvpvsi gnndehkmkl fkiwntlscp ymiaddkvle
      121 qlekyshqhq lldsfepvkk atfsshtfdy snqskgvvhi skpedlafiq fssgstgdpk
      181 gvmlthenli ynirdianqt gmsskdaylg wmplthdlgl iafhltcvia nakqlimpta
      241 lfirrpslwl kkvsehkvtq icspnfgykf fldqykpeta snwdlssvrm ilngaepvsv
      301 elchvfmdam svhglnknvm fpvyglaeas vgvstppldk dtflpihlnr qqlhvgepie
      361 evdksdkrcl tfvdlgypma stsvricddq nqvledgvig htqicgknvt sgyynnpeat
      421 akvktedgwl itgdlgfmrn grltitgrak diifvngqnv yphdieriae eldgvdlgkv
      481 avcgvhdaqt rqdrivafvm htkkiehfvp lvqklkshln yrggwyiqdv vpirripktt
      541 sgkvqrfkla qsyeqgefne ilttlaeatq tvpaaehkil pqgeieqkli gicqdilnvk
      601 sigtddsyfd igvnslqlvq ivdlledqlg ihikvtdffs yptiaklaay issqdlssea
      661 aataqpeake kvndrdiaii gmsgkfpqae tleqfwanma sgadnigpys derrkdaedf
      721 isrlntegrn mqiaeggyld evdkfdysff kltpreaslm dpnqrlflqt awstiedagy
      781 ggkqlagqkv gvyvgfskts feyerllsev epgalpnfai gnlssiissr iaylldlkgp
      841 altidtacss slvavhlack silsgdcdma laggvktill plkagigmes sddrarafdd
      901 qsdgtgwgeg vgavflkplr kaeqdgdnil avikgsainq dgstigisap nalaqaevil
      961 qawrdarinp etisyieahg tgtklgdpve idgitkafrk htqrkqfvai stvktnighl
     1021 yeaagiagli ksvlslkyqq iaplvhfrap nqkihfeesp vyantklrew ktdgfprrsg
     1081 lssfgfsgtn chvvleeyia ktesdqtstd snnrssplll tlsarsesal relvgryaer
     1141 frrgeelviq dvcytantgr ghlnhriamt aaggdslkak vfqlheqgrv vegvytgead
     1201 stgsaeivtg sldtlqsleq laakyvqgaq inwnalyagk hykkvslpty pferkrcwvn
     1261 vpeqvrteqk atvqsvqnrp etslnqvdha afpltqpshe stvpagasvy amdtagqirt
     1321 qsvpnatasa vverileqql rlmsqqldvl rgqsspsvks vsknvgnh
//
LOCUS       WP_258012669             191 aa            linear   BCT 02-MAR-2025
DEFINITION  P-loop NTPase fold protein, partial [Salmonella enterica].
ACCESSION   WP_258012669
VERSION     WP_258012669.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 191)
  AUTHORS   Aravind,L., Iyer,L.M., Leipe,D.D. and Koonin,E.V.
  TITLE     A novel family of P-loop NTPases with an unusual phyletic
            distribution and transmembrane segments inserted within the NTPase
            domain
  JOURNAL   Genome Biol 5 (5), R30 (2004)
   PUBMED   15128444
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019313.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07693.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         1..>191
                     /product="P-loop NTPase fold protein"
     Region          15..>191
                     /region_name="KAP_NTPase"
                     /note="KAP family P-loop domain; cl46386"
                     /db_xref="CDD:480726"
ORIGIN      
        1 mletlsfter defqrrniae niikllkpea displvidga wgtgksefsi klknliieqe
       61 teskvvyvda fkgdhaespl llitsaiasi lpeeekqnfi krslpairfg lktvlkagag
      121 wflrqeasev aeefqdamkk asnaaidgti eniledhmes ekninslksc iedisnkqki
      181 viiideldrc k
//
LOCUS       WP_258012561              56 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6097 family protein [unclassified Paenibacillus].
ACCESSION   WP_258012561
VERSION     WP_258012561.1
KEYWORDS    RefSeq.
SOURCE      unclassified Paenibacillus
  ORGANISM  unclassified Paenibacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 56)
  AUTHORS   Dejong,C.A., Chen,G.M., Li,H., Johnston,C.W., Edwards,M.R.,
            Rees,P.N., Skinnider,M.A., Webster,A.L. and Magarvey,N.A.
  TITLE     Polyketide and nonribosomal peptide retro-biosynthesis and global
            gene cluster matching
  JOURNAL   Nat Chem Biol 12 (12), 1007-1014 (2016)
   PUBMED   27694801
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039654.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19592.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..56
                     /organism="unclassified Paenibacillus"
                     /db_xref="taxon:185978"
     Protein         1..56
                     /product="DUF6097 family protein"
                     /calculated_mol_wt=6313
ORIGIN      
        1 mlanamfdyw vpsitllsvv fvgvivlaiv rnvyakqlht rvldrawqai fnhvdk
//
LOCUS       WP_258012831             786 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Stenotrophomonas maltophilia].
ACCESSION   WP_258012831
VERSION     WP_258012831.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (residues 1 to 786)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 786)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 786)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 786)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..786
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..786
                     /product="ATP-binding protein"
                     /calculated_mol_wt=84490
     Region          11..222
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Region          134..632
                     /region_name="COG4251"
                     /note="Bacteriophytochrome (light-regulated signal
                     transduction histidine kinase) [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443393"
     Region          <398..776
                     /region_name="TMAO_torS"
                     /note="TMAO reductase sytem sensor TorS; TIGR02956"
                     /db_xref="CDD:274362"
ORIGIN      
        1 mitradgcdm plvvawpsdr pplsfsaqgq pgglvadylr rlgeqialrp hplpaaagaa
       61 galpagtqav lgwpreqvpd gwvvsrpylq lsqvivrrrn dtplqglggl rgrrvasldt
      121 vplaahlreq apgawllqvd aldhalqlla igqvdavvat lgeveaalrr pgsdalviaa
      181 pagfddawvl aaapacaatv aafdtvlhel ddaqraalra awapsgarap parsplrwlv
      241 pvllvalali lvyafgywrl hressqrral eqrlqevtan lpavvyrarr sgegdyslpl
      301 vagdvqslfg msldsvrldh rrlmaavhvd drkpvldhle aaararapid itfrtlgphg
      361 wrwirshgrp lpgesddiew sgywmdvsqa qartralaga rhqaeetaaa kthflatmsh
      421 qirtpmstll gmlecladsp ldpcqrqvls tvdvaaqmlr qilddvldsh rlqalplqlr
      481 atdmgalata vqqllapmaa sralhlrcvl dpalqrwlla dglrvrqvlf nlvgnalkft
      541 lhggvelrlr vlrtqaagqc lrlqvsdsgv gisperqqav fadyiqaeps tgrrfggsgl
      601 glaicrdlva smggelqlqs spgkgtriwf dlefasclap leavpataev varlpaarvl
      661 vaedhptnlq llvqrlrelg lqvhatadgl qalaawraqg fdvvvtdchm pgmdgfalar
      721 airedpcpsr arvpiialta svlestreac raagidrfla kpvdtqglra tladvlpame
      781 pgsagq
//
LOCUS       WP_258012878             252 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Stenotrophomonas
            maltophilia].
ACCESSION   WP_258012878
VERSION     WP_258012878.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (residues 1 to 252)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         <1..>252
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <16..252
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(58..59,62..63,66,69..70,72..73,76,79..80,83,86..87,
                     90..91,94,97..98,100..101,105,107..108,111,114..115,
                     118..119,122,125,128..129,132,136,139,146,150,153,
                     156..157,160,163..164,167..168,170..171,174..175,188..189,
                     192,195..196,199,202..203,205..206,209..210,213,216..217,
                     220,223..224,226..227,230..231,233..234,237,240..241,244,
                     247..248)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            128..161
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 gvfarmrdda natvtqltri vgqiqasass itlaageias gnndlsrrte qqaanleeta
       61 asmeeltstv rqnaeharqa nqlaigahgv asqggevvgq vvttmsaiea sskkiaeiis
      121 vidgiafqtn ilalnaavea arageqgrgf avvasevrtl aqrsaaaake ikgliddsvg
      181 kvadgsalvh kagatmxeiv asvqrvtdim aeisaasqeq sagieqvnqt vvqmdettqq
      241 naalveeata aa
//
LOCUS       WP_258012879             580 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258012879
VERSION     WP_258012879.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..580
                     /product="Ig-like domain-containing protein"
     Region          <5..>291
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          10..92
                     /region_name="Big_6"
                     /note="Bacterial Ig domain; pfam17936"
                     /db_xref="CDD:465576"
     Region          <72..>576
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
ORIGIN      
        1 pasttvdsva psapllsisa dgalltgtae pnsqvrivvn gdtanpitvt vdgagnfslp
       61 fapplitgel iagvavdaag nvsgpatina pdlapptisv peaadtwina aeigdgiqvd
      121 vtvrptmqvg qvvtvkfagq ngyeaevsht ltagdiaagn ltltltppgg mgpfpegast
      181 vtadinggta stpvpftidt ippatpvlsl vgniltisae pgteltvtvd vggvtatatv
      241 tadnsglasl nlltdldvdf swdqllnaqv svvgrdpagn psntasigig tsieqpvtig
      301 nfgldvslnp lnprfgfsgt tepnssvvir vitpalnvel lpiqadssgn fslnllspti
      361 ltqlglnitd ilnlgsqisf nlvstdsngn dsaaygitlt pnglslnigq idvngtsgdd
      421 vlsgangsse hinggdgsdl ifnvgtgdhv vagngndtiq itatdfvsid ggagfdtlvl
      481 angidldyna vgvgtlsnle ridlgkgdsg svltltaaev daitdanntl qitgenndtl
      541 nvvgavntgt tqlingityd vytfgsttll iedntvqvvv
//
LOCUS       WP_258012880             186 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258012880
VERSION     WP_258012880.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>186
                     /product="AMP-binding protein"
     Region          <1..>186
                     /region_name="PRK12316"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237054"
ORIGIN      
        1 vpldieypre rllymmqdsr ahlllthshl lerlpipegl sclsvdreee wagfpahdpe
       61 valhgdnlay viytsgstgm pkgvavshgp liahivatge ryemtpedce lhfmsfafdg
      121 shegwmhpli ngarvlirdd slwlpertya emhrhgvtvg vfppvylqql aehaerdgnp
      181 ppvrvy
//
LOCUS       WP_258012980             319 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Stenotrophomonas
            maltophilia].
ACCESSION   WP_258012980
VERSION     WP_258012980.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (residues 1 to 319)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..319
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=34106
     Region          6..299
                     /region_name="PRK14997"
                     /note="LysR family transcriptional regulator; Provisional"
                     /db_xref="CDD:184959"
ORIGIN      
        1 mwtlhmlnln dlalfvtave qggfaaggrh lglprstlsk rvalleeqlq vrllqrssrr
       61 faltevgqef feraraalse veaaeaivrd rqaepsgtvr isasipvvqg elaaclpvla
      121 rryprlriev evsdrfidla qegidialrs hfgplpdsgl vqrllgseri vlvaspgyla
      181 aalavdtpeq lrahagllta rhatrwtlhg pdartvqvep qvalvgnesq lliaaaeagl
      241 gitvlphslc aaalaagrlq qvlpawhage vttsvllphr rgqlpgvrvv vdalvahyql
      301 naarapvpar ssgpgtarr
//
LOCUS       WP_258013048             679 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4034 domain-containing protein [Stenotrophomonas maltophilia].
ACCESSION   WP_258013048
VERSION     WP_258013048.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024624.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13226.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..679
                     /product="DUF4034 domain-containing protein"
                     /calculated_mol_wt=75898
     Region          6..268
                     /region_name="DUF4034"
                     /note="Domain of unknown function (DUF4034); pfam13226"
                     /db_xref="CDD:404165"
     Region          370..620
                     /region_name="TPR"
                     /note="TPR repeat [General function prediction only];
                     COG0790"
                     /db_xref="CDD:440553"
     Region          490..519
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          525..560
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          564..600
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
ORIGIN      
        1 mddlawraqa rsalrehdha aleallaphe qawlngtrpl pgirwrlrnl qdaalplder
       61 lqqaqrwvaa aphsyyahlr lgacwesaag alrsadvaal vedsqwlaaq qardhavhay
      121 lqaialsqrp alaldgikri tsylrepnwl ralqagqspe sdeaalaehy pqawpqalql
      181 lsrfgaplqr mpeslppllr drseddfdap laywmrlvle qrpddldtle dtlyylyprw
      241 ggsheamedf ieggwcrgle laqrnalrwc keqdwmgelp rrgdaeavav herayeqild
      301 whlegyvrae vltqraalrf hlgrieeied qvqwdtgfmq aaledlqhaw aldrdmvlhg
      361 gfssleactw fahvdgaeal faqvvdyaar egdsalgllw aataiehgml gqtadparaq
      421 pllqralkla aqqktstvtf asnlfcdvsq daglsllqrm addgdagama alcdlykgrl
      481 ggrdqpdfvd aqkalywqer aveggdliat ynlgvrlvaa ggadnearar elylrclrea
      541 dagervwgpt crnlaclafd gqndahkrda veraliplww rgedddklwa agyladvyhf
      601 gngvpanafl altwlqrase idteyvdvvr maplingegr wfgasrarkq qaqdrqqvds
      661 atwaltfgqr sqdsdltav
//
LOCUS       WP_258013233             214 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase, partial [Pectobacterium odoriferum].
ACCESSION   WP_258013233
VERSION     WP_258013233.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium odoriferum
  ORGANISM  Pectobacterium odoriferum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 214)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 214)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019344.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07724.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Pectobacterium odoriferum"
                     /db_xref="taxon:78398"
     Protein         <1..214
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
     Region          <1..190
                     /region_name="VI_ClpV1"
                     /note="type VI secretion ATPase, ClpV1 family; TIGR03345"
                     /db_xref="CDD:274528"
ORIGIN      
        1 qggilteavr krpysvvlld evekahrdvm nlfyqvfdrg fmrdgegrei dfrntvilmt
       61 snlgsdplmq lldeqpdate adlherlrpi lrdhfqpall arfqtviyrp laeaamrtiv
      121 emklaqvskr lsrhygltth ieeslydalt aacllpdtga rnvdsllnqh ilpvlsqqll
      181 tymaakqkpq tlclswseea giglefdriq gvna
//
LOCUS       WP_258013287             147 aa            linear   BCT 02-MAR-2025
DEFINITION  prolipoprotein diacylglyceryl transferase family protein, partial
            [Stenotrophomonas maltophilia].
ACCESSION   WP_258013287
VERSION     WP_258013287.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013915.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01790.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..>147
                     /product="prolipoprotein diacylglyceryl transferase family
                     protein"
                     /EC_number="2.4.99.-"
                     /GO_component="GO:0005886 - plasma membrane [Evidence
                     IEA]"
                     /GO_function="GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA]"
                     /GO_process="GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
     Region          2..>100
                     /region_name="Lgt"
                     /note="Prolipoprotein diacylglyceryltransferase [Cell
                     wall/membrane/envelope biogenesis]; COG0682"
                     /db_xref="CDD:440446"
ORIGIN      
        1 misvgpfsvq vvavflavll awavarmvak rlpdspykaa ggmlldaafv gfvaarlgyi
       61 aqwweeyaqs pmsmisigdq gfswwvgvla alaliwwrtr avralrrpvl agvavglaaw
      121 fagsfeirvg yatcglrrek sslpair
//
LOCUS       WP_258013296             296 aa            linear   BCT 02-MAR-2025
DEFINITION  polyprenyl synthetase family protein [Buchnera aphidicola].
ACCESSION   WP_258013296
VERSION     WP_258013296.1
KEYWORDS    RefSeq.
SOURCE      Buchnera aphidicola
  ORGANISM  Buchnera aphidicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Buchnera.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012568.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00348.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Buchnera aphidicola"
                     /db_xref="taxon:9"
     Protein         1..296
                     /product="polyprenyl synthetase family protein"
                     /GO_process="GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=33960
     Region          1..296
                     /region_name="Isoprenoid_Biosyn_C1"
                     /note="Isoprenoid Biosynthesis enzymes, Class 1; cl00210"
                     /db_xref="CDD:469660"
     Site            order(76,79..81,83..85,89..90,95..96,158,161,181..182,185,
                     223..224,227,237,242)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:173833"
     Site            order(79..86,89..90)
                     /site_type="active"
                     /note="chain length determination region [active]"
                     /db_xref="CDD:173833"
     Site            order(84..85,90,95..96,161,181,223..224,227,237,242)
                     /site_type="active"
                     /note="substrate-Mg2+ binding site [active]"
                     /db_xref="CDD:173833"
     Site            order(84..85,90,95..96,181,223..224)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:173833"
     Site            order(84..85,90,95..96,161,181)
                     /site_type="other"
                     /note="aspartate-rich region 1"
                     /db_xref="CDD:173833"
     Site            order(92..106,230..231,237..242,245..246)
                     /site_type="active"
                     /note="active site lid residues [active]"
                     /db_xref="CDD:173833"
     Site            order(223..224,227,237,242)
                     /site_type="other"
                     /note="aspartate-rich region 2"
                     /db_xref="CDD:173833"
ORIGIN      
        1 mnfsdfynfy qnrideklld llnslpfqss iliksmkygt ltggkrlrsc lvyiigemfk
       61 vniitldiis iaielihsys lihddlpcid ndyfrrgkls chvkygenfa ilagdalqsl
      121 afnvlsthim pgvsdkkrik iiselsysig ssgmcigqtl dlqkdtkeln itelekinly
      181 ktaflirssv rlsylssnff skkilllldr fsvviglafq iqddifdfkn dtkkikknen
      241 qniystypyl igmnqsqkki kilyqealci lkilkkkcfi inklesltdf iiqrsk
//
LOCUS       WP_258013128             371 aa            linear   BCT 02-MAR-2025
DEFINITION  CfaE/CblD family pilus tip adhesin [Stenotrophomonas maltophilia].
ACCESSION   WP_258013128
VERSION     WP_258013128.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (residues 1 to 371)
  AUTHORS   Sajjan,U.S., Xie,H., Lefebre,M.D., Valvano,M.A. and Forstner,J.F.
  TITLE     Identification and molecular analysis of cable pilus biosynthesis
            genes in Burkholderia cepacia
  JOURNAL   Microbiology (Reading) 149 (Pt 4), 961-971 (2003)
   PUBMED   12686638
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019078.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07434.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..371
                     /product="CfaE/CblD family pilus tip adhesin"
                     /calculated_mol_wt=40933
     Region          99..368
                     /region_name="CblD"
                     /note="CblD like pilus biogenesis initiator; cl06460"
                     /db_xref="CDD:471445"
ORIGIN      
        1 mwvllasvlm vpgawaqrpp ethpsrglvm knvamnwdrs ampedielwa prtvlaydgd
       61 dltlgygqlh vvcvsnsnpn rgscpeagie easlglreiv lsfverrsqq rtdlrlrggi
      121 eralsgracl gnfwqngila pwstyslkca ldepagtgiq lhlpraelaq lvagvwsaql
      181 dlkantpseq gveyysfkfd ftitdydavs iyfpefpqtt pnvdlnlryd plnqtvggrk
      241 plemclydgl gsqseylgvt vtdtsgrtpg plgyslwhdd ggsgddqrld ymielehaga
      301 rrrmasgvee qlrdidtaql rlvllpgmtq pvfcvptpll lttprvpite qraggyegel
      361 kvqlrlpttr p
//
LOCUS       WP_258013340             435 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidylprolyl isomerase [Buchnera aphidicola].
ACCESSION   WP_258013340
VERSION     WP_258013340.1
KEYWORDS    RefSeq.
SOURCE      Buchnera aphidicola
  ORGANISM  Buchnera aphidicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Buchnera.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012846.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00639.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Buchnera aphidicola"
                     /db_xref="taxon:9"
     Protein         1..435
                     /product="peptidylprolyl isomerase"
                     /EC_number="5.2.1.8"
                     /GO_function="GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /calculated_mol_wt=51704
     Region          30..432
                     /region_name="PRK10770"
                     /note="peptidyl-prolyl cis-trans isomerase SurA;
                     Provisional"
                     /db_xref="CDD:236758"
ORIGIN      
        1 mrrskmrvyf vlilyvfssf fsscfakvfe idkivavvnn qailnsdvnq vlfylkqdkd
       61 iitvplkvnf lrdkilekli idtlileean kfnieisdsq vdmilrniaf kknitlnelk
      121 nniilnntnn ffnyedyikn ikkslkikml qdyilnknvh vsekeiyyll nkaikkqnel
      181 kkidlkciil pysnreseks iknkkilidn fskiindnsn fdyfyesfkk nkniflveki
      241 lskdlknlrk iffskldifk knqilgpvlg kkgfyivkvn niknnstkki itefhiqhcl
      301 irpsiilndk qakkdifkiy nnikknnysf eyavknfshd vyssykkgdl gwilntsfng
      361 vfknvlknln dnevskpvks kfgwhiikll ekreidekwk iekekiyqml lereikkekn
      421 nwieklkkss yisky
//
LOCUS       WP_258013328             196 aa            linear   BCT 02-MAR-2025
DEFINITION  glutamate ligase domain-containing protein [Buchnera aphidicola].
ACCESSION   WP_258013328
VERSION     WP_258013328.1
KEYWORDS    RefSeq.
SOURCE      Buchnera aphidicola
  ORGANISM  Buchnera aphidicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Buchnera.
REFERENCE   1  (residues 1 to 196)
  AUTHORS   Sink,R., Kotnik,M., Zega,A., Barreteau,H., Gobec,S., Blanot,D.,
            Dessen,A. and Contreras-Martel,C.
  TITLE     Crystallographic Study of Peptidoglycan Biosynthesis Enzyme MurD:
            Domain Movement Revisited
  JOURNAL   PLoS One 11 (3), e0152075 (2016)
   PUBMED   27031227
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 196)
  AUTHORS   Kouidmi,I., Levesque,R.C. and Paradis-Bleau,C.
  TITLE     The biology of Mur ligases as an antibacterial target
  JOURNAL   Mol Microbiol 94 (2), 242-253 (2014)
   PUBMED   25130693
REFERENCE   3  (residues 1 to 196)
  AUTHORS   Ziegler,K., Diener,A., Herpin,C., Richter,R., Deutzmann,R. and
            Lockau,W.
  TITLE     Molecular characterization of cyanophycin synthetase, the enzyme
            catalyzing the biosynthesis of the cyanobacterial reserve material
            multi-L-arginyl-poly-L-aspartate (cyanophycin)
  JOURNAL   Eur J Biochem 254 (1), 154-159 (1998)
   PUBMED   9652408
REFERENCE   4  (residues 1 to 196)
  AUTHORS   Bertrand,J.A., Auger,G., Fanchon,E., Martin,L., Blanot,D., van
            Heijenoort,J. and Dideberg,O.
  TITLE     Crystal structure of UDP-N-acetylmuramoyl-L-alanine:D-glutamate
            ligase from Escherichia coli
  JOURNAL   EMBO J 16 (12), 3416-3425 (1997)
   PUBMED   9218784
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014874.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02875.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Buchnera aphidicola"
                     /db_xref="taxon:9"
     Protein         1..196
                     /product="glutamate ligase domain-containing protein"
                     /GO_function="GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=22079
     Region          <1..185
                     /region_name="murF"
                     /note="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine
                     ligase; Reviewed; PRK10773"
                     /db_xref="CDD:182718"
ORIGIN      
        1 mhtpsgtini vlpylgyqsi snalaasala fsihtplkqi qigllkspii pgrlepiqln
       61 kntilindty nsnvasmiia ikilekmpgy kilvigdmae lgeksilyhk iignianvsn
      121 idyiftfgky sneifkickn gkhfsekhkn mltkklketm lkqnkstili kgsrhmkmek
      181 iieylikeyk kndifn
//
LOCUS       WP_258013347             239 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramoyl-L-alanine amidase [Buchnera aphidicola].
ACCESSION   WP_258013347
VERSION     WP_258013347.1
KEYWORDS    RefSeq.
SOURCE      Buchnera aphidicola
  ORGANISM  Buchnera aphidicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Buchnera.
REFERENCE   1  (residues 1 to 239)
  AUTHORS   Kuroda,A., Sugimoto,Y., Funahashi,T. and Sekiguchi,J.
  TITLE     Genetic structure, isolation and characterization of a Bacillus
            licheniformis cell wall hydrolase
  JOURNAL   Mol Gen Genet 234 (1), 129-137 (1992)
   PUBMED   1495475
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013670.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01520.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Buchnera aphidicola"
                     /db_xref="taxon:9"
     Protein         1..239
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /EC_number="3.5.1.28"
                     /GO_function="GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=27661
     Region          <6..232
                     /region_name="PRK10431"
                     /note="N-acetylmuramoyl-l-alanine amidase II; Provisional"
                     /db_xref="CDD:236692"
ORIGIN      
        1 mkrtkkitil idpghggqdp gsighrglke keitlkiaiq lkklldkdkl fnavltrnnd
       61 sylslkkrkn flkyqnvnll lsihvdssqk syvsgisiwi vsnnrmhrei nnfiknkkek
      121 iyfykniedi fknnkndiyl kktildlqfn nfqameikls scifqefkki ikvnkikpny
      181 aslgilssin tpsilietgf itnfeeekkl ktiayqkkia ntiyaslkny fqnkstsvf
//
LOCUS       WP_258013416             406 aa            linear   BCT 02-MAR-2025
DEFINITION  P44/Msp2 family outer membrane protein [Anaplasma phagocytophilum].
ACCESSION   WP_258013416
VERSION     WP_258013416.1
KEYWORDS    RefSeq.
SOURCE      Anaplasma phagocytophilum
  ORGANISM  Anaplasma phagocytophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rickettsiales; Anaplasmataceae; Anaplasma; phagocytophilum group.
REFERENCE   1  (residues 1 to 406)
  AUTHORS   Braig,H.R., Zhou,W., Dobson,S.L. and O'Neill,S.L.
  TITLE     Cloning and characterization of a gene encoding the major surface
            protein of the bacterial endosymbiont Wolbachia pipientis
  JOURNAL   J Bacteriol 180 (9), 2373-2378 (1998)
   PUBMED   9573188
REFERENCE   2  (residues 1 to 406)
  AUTHORS   Oberle,S.M. and Barbet,A.F.
  TITLE     Derivation of the complete msp4 gene sequence of Anaplasma
            marginale without cloning
  JOURNAL   Gene 136 (1-2), 291-294 (1993)
   PUBMED   8294020
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01617.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Anaplasma phagocytophilum"
                     /db_xref="taxon:948"
     Protein         1..406
                     /product="P44/Msp2 family outer membrane protein"
                     /calculated_mol_wt=43064
     Region          37..404
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mrsrsklllg svmmsmaivm agndvrahdd vsaldasgag yfyvgldysp afskirdfsi
       61 resngetkav ypylkdgksv kleshkfdwn tpdprigfkd nmlvamegsv gygiggarve
      121 leigyerfkt kgirdsgske deadtvylla kelaydvvtg qtdnlaaala ktsgkdivqf
      181 akavgvshpn idskvcrtkd ggssqnkygk yanetdltde nahtvavcgg rggtsgsggs
      241 aaevfkqfie ktledgsknw ptskdngktg kvelksrpnd nakavagdlt kltpeektiv
      301 agllaktieg gevveiravs stsvmvnacy dllseglgvv pyacvglggn fvgvvdghit
      361 pklayrlkag lsyqlspeis afaggfyhrv vgdgvyddlq aqlptn
//
LOCUS       WP_258013473             591 aa            linear   BCT 02-MAR-2025
DEFINITION  porin [Anaplasma phagocytophilum].
ACCESSION   WP_258013473
VERSION     WP_258013473.1
KEYWORDS    RefSeq.
SOURCE      Anaplasma phagocytophilum
  ORGANISM  Anaplasma phagocytophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rickettsiales; Anaplasmataceae; Anaplasma; phagocytophilum group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024996.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13609.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Anaplasma phagocytophilum"
                     /db_xref="taxon:948"
     Protein         1..591
                     /product="porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=65623
     Region          <445..591
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mtrvslsttl aslmmfygms dalassaaqq skvlsdekgv vavkrvtdks nlgryitvsp
       61 vidiggsvls hgwfafrdsy yhkkgieekl fpasenlraq gfasdamlyv taegkndnyk
      121 iryggsiele vpytqkadyt sfkqvrnrgt kvyvnttfge vsfgyqvgid simrvdalsi
      181 gagdisntwm ryvnlrgihd plegltnekr lvllprnaav fteeieedla lpgnaaaste
      241 dveeglaplq ygsqvrsvls rsrpalptel kklylenvfy lstglysesl fdggnrfsrn
      301 askpidanna lnltnalplr ftylspdfag lrlgvsyapf gyeedllldt htaikrslva
      361 rmrvfkdytr fhraiknkfs iplveeggtr kkfiiplyen ivnagmtyss sfndldfkls
      421 vvteyakgkt rllrdntdie fakmdtikni vfggmlkykn vklaasygyl gqidginnmy
      481 syridnfvln ttdrviirts gsyfltagag yeydrlyvsa fyrgsnysgn ifnevslgae
      541 ynisghssrv ksmifanyhn fsalsavvtd pvatdggnrg qvilagmkvr f
//
LOCUS       WP_258013368             102 aa            linear   BCT 02-MAR-2025
DEFINITION  aminomethyltransferase beta-barrel domain-containing protein
            [Anaplasma phagocytophilum].
ACCESSION   WP_258013368
VERSION     WP_258013368.1
KEYWORDS    RefSeq.
SOURCE      Anaplasma phagocytophilum
  ORGANISM  Anaplasma phagocytophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rickettsiales; Anaplasmataceae; Anaplasma; phagocytophilum group.
REFERENCE   1  (residues 1 to 102)
  AUTHORS   Hagervall,T.G., Edmonds,C.G., McCloskey,J.A. and Bjork,G.R.
  TITLE     Transfer RNA(5-methylaminomethyl-2-thiouridine)-methyltransferase
            from Escherichia coli K-12 has two enzymatic activities
  JOURNAL   J Biol Chem 262 (18), 8488-8495 (1987)
   PUBMED   3298234
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042466.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20258.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Anaplasma phagocytophilum"
                     /db_xref="taxon:948"
     Protein         1..102
                     /product="aminomethyltransferase beta-barrel
                     domain-containing protein"
                     /calculated_mol_wt=10770
     Region          <27..102
                     /region_name="AANH_superfamily"
                     /note="Adenine nucleotide alpha hydrolase (AANH)
                     superfamily; cl00292"
                     /db_xref="CDD:469708"
ORIGIN      
        1 mevgystkya tpklldspth avslatqnka sirdlnwlsk dqipeyglsa svrlrssssa
       61 vratisrsak dgkgrvvlhe gcvvppgqac viydnkrllg gg
//
LOCUS       WP_258013530             244 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6226 family protein [Prescottella equi].
ACCESSION   WP_258013530
VERSION     WP_258013530.1
KEYWORDS    RefSeq.
SOURCE      Prescottella equi (Rhodococcus equi)
  ORGANISM  Prescottella equi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Prescottella.
REFERENCE   1  (residues 1 to 244)
  AUTHORS   Feng,Z., Kim,J.H. and Brady,S.F.
  TITLE     Fluostatins produced by the heterologous expression of a TAR
            reassembled environmental DNA derived type II PKS gene cluster
  JOURNAL   J Am Chem Soc 132 (34), 11902-11903 (2010)
   PUBMED   20690632
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040359.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19736.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Prescottella equi"
                     /db_xref="taxon:43767"
     Protein         1..244
                     /product="DUF6226 family protein"
                     /calculated_mol_wt=26243
     Region          43..242
                     /region_name="DUF6226"
                     /note="Family of unknown function (DUF6226); pfam19736"
                     /db_xref="CDD:466165"
ORIGIN      
        1 mgadsdmsww eryntgirrm hetgwgadva vlsreicell ddvdatfavt gaatpgwpnp
       61 yedgaepdea eyeqltnpek flivvaraqa wtrvlldrgw areaphvdwa lrpfdtggae
      121 tvlepavdga vplvltthtp vdsdhiftvt vaagdpavrl aeipdcgcda cdrgsaalle
      181 eldrwvlaiv dgslqvavha dgasirssfg arggtvqhld qptsftaapw sanwtprrip
      241 ggrd
//
LOCUS       WP_258013422              98 aa            linear   BCT 02-MAR-2025
DEFINITION  P44/Msp2 family outer membrane protein [Anaplasma phagocytophilum].
ACCESSION   WP_258013422
VERSION     WP_258013422.1
KEYWORDS    RefSeq.
SOURCE      Anaplasma phagocytophilum
  ORGANISM  Anaplasma phagocytophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rickettsiales; Anaplasmataceae; Anaplasma; phagocytophilum group.
REFERENCE   1  (residues 1 to 98)
  AUTHORS   Braig,H.R., Zhou,W., Dobson,S.L. and O'Neill,S.L.
  TITLE     Cloning and characterization of a gene encoding the major surface
            protein of the bacterial endosymbiont Wolbachia pipientis
  JOURNAL   J Bacteriol 180 (9), 2373-2378 (1998)
   PUBMED   9573188
REFERENCE   2  (residues 1 to 98)
  AUTHORS   Oberle,S.M. and Barbet,A.F.
  TITLE     Derivation of the complete msp4 gene sequence of Anaplasma
            marginale without cloning
  JOURNAL   Gene 136 (1-2), 291-294 (1993)
   PUBMED   8294020
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01617.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Anaplasma phagocytophilum"
                     /db_xref="taxon:948"
     Protein         1..98
                     /product="P44/Msp2 family outer membrane protein"
                     /calculated_mol_wt=10339
     Region          <2..98
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mpyvcvglgg nfvgvvdghi tpklahrlka glsyqlspei safaggfyhr vvgdgvyddl
       61 paqrlvddts padrtkdtai anfsmayvgg efgvrfaf
//
LOCUS       WP_258013425             310 aa            linear   BCT 02-MAR-2025
DEFINITION  P44/Msp2 family outer membrane protein [Anaplasma phagocytophilum].
ACCESSION   WP_258013425
VERSION     WP_258013425.1
KEYWORDS    RefSeq.
SOURCE      Anaplasma phagocytophilum
  ORGANISM  Anaplasma phagocytophilum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rickettsiales; Anaplasmataceae; Anaplasma; phagocytophilum group.
REFERENCE   1  (residues 1 to 310)
  AUTHORS   Braig,H.R., Zhou,W., Dobson,S.L. and O'Neill,S.L.
  TITLE     Cloning and characterization of a gene encoding the major surface
            protein of the bacterial endosymbiont Wolbachia pipientis
  JOURNAL   J Bacteriol 180 (9), 2373-2378 (1998)
   PUBMED   9573188
REFERENCE   2  (residues 1 to 310)
  AUTHORS   Oberle,S.M. and Barbet,A.F.
  TITLE     Derivation of the complete msp4 gene sequence of Anaplasma
            marginale without cloning
  JOURNAL   Gene 136 (1-2), 291-294 (1993)
   PUBMED   8294020
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01617.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Anaplasma phagocytophilum"
                     /db_xref="taxon:948"
     Protein         1..310
                     /product="P44/Msp2 family outer membrane protein"
                     /calculated_mol_wt=32822
     Region          <195..>263
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mrvvstiall emvfmmiyrl nylespgisr syaitlllkr ktkgirdsgs kedeadtvyl
       61 lakelaydvv tgqtdnlaaa laktsgkdiv qfakaveiss pnignkvcat egtsgnhygk
      121 ygevyvagsg sgqeritlcg gkgdttngsa kqeylgdfvr etlkgngskn wptteskgtk
      181 tqesaqnnna navakdltkl tteektivag llaktiegge vveiravsst svmvnacydl
      241 lseglgvvpy acvglggnfv gvvdeystir wastlyahsk slgkisalsl tkqttisnsp
      301 ylvgpysgfi
//
LOCUS       WP_258013665             411 aa            linear   BCT 02-MAR-2025
DEFINITION  GHKL domain-containing protein [Lactobacillus amylovorus].
ACCESSION   WP_258013665
VERSION     WP_258013665.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillus amylovorus
  ORGANISM  Lactobacillus amylovorus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025854.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14501.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Lactobacillus amylovorus"
                     /db_xref="taxon:1604"
     Protein         1..411
                     /product="GHKL domain-containing protein"
                     /calculated_mol_wt=47663
     Region          1..377
                     /region_name="CitA"
                     /note="Sensor histidine kinase DipB regulating
                     citrate/malate metabolism [Signal transduction
                     mechanisms]; COG3290"
                     /db_xref="CDD:442519"
ORIGIN      
        1 mglyiyfgiv rkknkklvlg saiifslvdl ifmvserlin slfllfdses qiylwdilid
       61 ivvllvlyry nerirefltd inssiflgii iylyvsielv nyylssdrra veviqislgl
      121 lvlqtffail vyagmvhiqk dlltrqeqeq qklqlkltet krenteirnr elalkeqqlq
      181 ienaqlkeys nyldknedel rhfkhdyenl lnslkisaek gdsesvvkql aeytdtqide
      241 kalrkykgvn hihveelksi vitklaklyn eeipysfgcd veiynipksv nifdivriig
      301 itfdnaiees qslikqtgnt dsakvdamyy qedgnfefri rnriaadtsl asdilskdgy
      361 stkkhhtgig lanvkqielk yeeymlvnyg iengwfnfel eimpdneggi e
//
LOCUS       WP_258013888             203 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase domain-containing protein [Paenibacillus
            polymyxa].
ACCESSION   WP_258013888
VERSION     WP_258013888.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus polymyxa
  ORGANISM  Paenibacillus polymyxa
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025033.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13649.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Paenibacillus polymyxa"
                     /db_xref="taxon:1406"
     Protein         1..203
                     /product="methyltransferase domain-containing protein"
                     /calculated_mol_wt=23025
     Region          <17..185
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
ORIGIN      
        1 mmkfmkplyd qkshlyllda gcgegshssh iqdkltwkgi tkltsvgmdl skegivaaak
       61 ayphalwcva dlahcpfanq qfdgilnils psnyaefkri lsedgcilkv ipepyylqel
      121 rclyeqkkpt ysndnilsrf kdsfnllsae rvtyrfmlna dlaepllhmt plswgatead
      181 wqrmqeidlp yvtvdllilc grk
//
LOCUS       WP_258013891             472 aa            linear   BCT 02-MAR-2025
DEFINITION  radical SAM protein [Paenibacillus polymyxa].
ACCESSION   WP_258013891
VERSION     WP_258013891.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus polymyxa
  ORGANISM  Paenibacillus polymyxa
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 472)
  AUTHORS   Benjdia,A., Leprince,J., Guillot,A., Vaudry,H., Rabot,S. and
            Berteau,O.
  TITLE     Anaerobic sulfatase-maturating enzymes: radical SAM enzymes able to
            catalyze in vitro sulfatase post-translational modification
  JOURNAL   J Am Chem Soc 129 (12), 3462-3463 (2007)
   PUBMED   17335281
REFERENCE   2  (residues 1 to 472)
  AUTHORS   Berteau,O., Guillot,A., Benjdia,A. and Rabot,S.
  TITLE     A new type of bacterial sulfatase reveals a novel maturation
            pathway in prokaryotes
  JOURNAL   J Biol Chem 281 (32), 22464-22470 (2006)
   PUBMED   16766528
REFERENCE   3  (residues 1 to 472)
  AUTHORS   Sofia,H.J., Chen,G., Hetzler,B.G., Reyes-Spindola,J.F. and
            Miller,N.E.
  TITLE     Radical SAM, a novel protein superfamily linking unresolved steps
            in familiar biosynthetic pathways with radical mechanisms:
            functional characterization using new analysis and information
            visualization methods
  JOURNAL   Nucleic Acids Res 29 (5), 1097-1106 (2001)
   PUBMED   11222759
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015983.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04055.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Paenibacillus polymyxa"
                     /db_xref="taxon:1406"
     Protein         1..472
                     /product="radical SAM protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0051539 - 4 iron, 4 sulfur cluster
                     binding [Evidence IEA]"
                     /calculated_mol_wt=53667
     Region          73..457
                     /region_name="rSAM_ocin_clost"
                     /note="Cys-rich peptide radical SAM maturase CcpM;
                     TIGR04068"
                     /db_xref="CDD:274958"
ORIGIN      
        1 mgtgkvmect eieyvflnnl qvygdieevi kttkvnddtl tilidlihva qeqhlfqapp
       61 llsfalskde vlenarshle qvtlelteqc nmachyciyh sgnidfrefg rrhmswqvae
      121 laidytlkns gkkvavtfyg gepliefkll khcvdytlkn gadkdltfsm ttnltlmtae
      181 iaeylstvpn fgvvcsidgp keihdcrrvf kngegtydka inglkhlina ygeksnslis
      241 lsmvtprpan dvvmkkiqnf fnslswvpkd itknisyvrh ssdiektite kssmhcydnp
      301 vgnwtidlml nntsiskntp ftidflhkqf siihdrilte tpypdyclng ccspasrriy
      361 vtvngdfhlc erigkspsvg nvysgidesv lidryiddyg keslsqcskc wairlcsvcy
      421 vecydsdkfn iekkriacrr sldmlehali syhtilehkp hlleelnhit lv
//
LOCUS       WP_258013960             130 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5665 domain-containing protein [Paenibacillus polymyxa].
ACCESSION   WP_258013960
VERSION     WP_258013960.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus polymyxa
  ORGANISM  Paenibacillus polymyxa
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040137.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18910.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Paenibacillus polymyxa"
                     /db_xref="taxon:1406"
     Protein         1..130
                     /product="DUF5665 domain-containing protein"
                     /calculated_mol_wt=14329
     Region          65..122
                     /region_name="DUF5665"
                     /note="Domain of unknown function (DUF5665); pfam18910"
                     /db_xref="CDD:436823"
ORIGIN      
        1 mtarsrrrlg rslrgmngee aaiasdkgia gdqaeklsrv eklvqavseq mertriadya
       61 lllnkpwrll wlnlisgvsr gigialgftf faatiiyvlq vlgalnlpii gdyiadivri
      121 vqrqleltty
//
LOCUS       WP_258014129             146 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Salmonella enterica].
ACCESSION   WP_258014129
VERSION     WP_258014129.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 146)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         <1..>146
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          1..145
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(3..4,6..7,10,14,16..22,108..113,119..120,122..123)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176102"
ORIGIN      
        1 flpqiihafk rqhphthvql idkpmsqlqk simlgeadfg igperplepe idkqtlftte
       61 ialychpdyr lhkktvrwee iqseeliavg nesipmisat agvrikpkmt vehmatamsl
      121 aaqcegvvia gtfsrhyaks yqlatc
//
LOCUS       WP_258014162             275 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein, partial [Pseudomonas gingeri].
ACCESSION   WP_258014162
VERSION     WP_258014162.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas gingeri
  ORGANISM  Pseudomonas gingeri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Pseudomonas gingeri"
                     /db_xref="taxon:117681"
     Protein         <1..275
                     /product="helicase-related protein"
     Region          <1..243
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
ORIGIN      
        1 pnrqqtmlfs attggsglre miakvlnnpe hlqlnavsql ndttrqqiit adhnqhkeqi
       61 vnwllanety qkaivftntr amadriygrl vaqeykafvl hgekdqkdrk laidrlkqgg
      121 vkilvatdva argldvegld lvinfdmprs gdeyvhrigr tgragndgla islichgdwn
      181 lmssierylk qsferrtike vkgtysgpkk vkasgkavgv kkkktdakgd kkkssakapt
      241 krkianrpkt dalslvskdg maplkrrkpa apdae
//
LOCUS       WP_258014278             405 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein, partial [Pseudomonas gingeri].
ACCESSION   WP_258014278
VERSION     WP_258014278.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas gingeri
  ORGANISM  Pseudomonas gingeri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Pseudomonas gingeri"
                     /db_xref="taxon:117681"
     Protein         <1..405
                     /product="phosphopantetheine-binding protein"
     Region          <13..272
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
     Region          181..393
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 arrqvfpeag saaaviaqhv llaqnlepsg qldserlrrq larhlpdyml pghwvtlrrl
       61 plsgngkvdr grlpglmlge ksdardyepp rpgletqvad lwaqllkrer vgrrcdffal
      121 ggdsllatrl maslrqqlgc vvhlrdlfqh pqlqdfvavl gqprgeqplv mlnrpvgsvn
      181 vvclptadge ceayrqlagr ldgqltlvgl rdpggrcgsd lsmalhdfie tlkalpgpfl
      241 llgwsvaakl atalaaemer ggqpvaglml ldplsgscfe edgevqparf fglapmpeqa
      301 lyqqarqagr ippgleppaf dslvqrcrtl haglgryqap rlaapvhilq saaspqcwae
      361 plrdwqvlld qaprpqvlwt lhwellsdpe slavigetll alsrd
//
LOCUS       WP_258014289             180 aa            linear   BCT 02-MAR-2025
DEFINITION  OB-fold nucleic acid binding domain-containing protein, partial
            [Pseudomonas gingeri].
ACCESSION   WP_258014289
VERSION     WP_258014289.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas gingeri
  ORGANISM  Pseudomonas gingeri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 180)
  AUTHORS   Koonin,E.V., Wolf,Y.I. and Aravind,L.
  TITLE     Protein fold recognition using sequence profiles and its
            application in structural genomics
  JOURNAL   Adv Protein Chem 54, 245-275 (2000)
   PUBMED   10829230
REFERENCE   2  (residues 1 to 180)
  AUTHORS   Bochkarev,A., Pfuetzner,R.A., Edwards,A.M. and Frappier,L.
  TITLE     Structure of the single-stranded-DNA-binding domain of replication
            protein A bound to DNA
  JOURNAL   Nature 385 (6612), 176-181 (1997)
   PUBMED   8990123
REFERENCE   3  (residues 1 to 180)
  AUTHORS   Keshav,K.F., Chen,C. and Dutta,A.
  TITLE     Rpa4, a homolog of the 34-kilodalton subunit of the replication
            protein A complex
  JOURNAL   Mol Cell Biol 15 (6), 3119-3128 (1995)
   PUBMED   7760808
REFERENCE   4  (residues 1 to 180)
  AUTHORS   Ruff,M., Krishnaswamy,S., Boeglin,M., Poterszman,A., Mitschler,A.,
            Podjarny,A., Rees,B., Thierry,J.C. and Moras,D.
  TITLE     Class II aminoacyl transfer RNA synthetases: crystal structure of
            yeast aspartyl-tRNA synthetase complexed with tRNA(Asp)
  JOURNAL   Science 252 (5013), 1682-1689 (1991)
   PUBMED   2047877
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013499.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01336.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Pseudomonas gingeri"
                     /db_xref="taxon:117681"
     Protein         <1..180
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
     Region          <1..171
                     /region_name="dnaE"
                     /note="DNA polymerase III subunit alpha; Validated;
                     PRK05673"
                     /db_xref="CDD:235554"
ORIGIN      
        1 arqriidlkp ardtqtvagm iinlrvmknk kgdkmgfitl ddrsarieas lfadafmsaq
       61 sllqtdamvv vegevsnddf sgglrlrvkr vmsmedartn laeslrlkvq saalkgdelr
      121 wlgelfkkhr gacpitmeyt gqdakallql gdgwkidpad sliqalrdqf grdnvflqyr
//
LOCUS       WP_258014294              78 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Pseudomonas
            gingeri].
ACCESSION   WP_258014294
VERSION     WP_258014294.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas gingeri
  ORGANISM  Pseudomonas gingeri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 78)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Pseudomonas gingeri"
                     /db_xref="taxon:117681"
     Protein         1..>78
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          1..>78
                     /region_name="PRK08155"
                     /note="acetolactate synthase large subunit; cl39075"
                     /db_xref="CDD:453955"
ORIGIN      
        1 mskmraieaa vlvmrregvd tafgipgaai nplysalqkv ggidhvlarh vegashmaeg
       61 ytrtragnig vcigtsgp
//
LOCUS       WP_258014375             243 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY-family carbohydrate kinase, partial [Klebsiella pneumoniae].
ACCESSION   WP_258014375
VERSION     WP_258014375.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 243)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 243)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02782.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..243
                     /product="FGGY-family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <1..234
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 gavspgdafi slgtsgvlfv vtdayrpapq savhafchvl pnlwhqmsvm lsaasclqwf
       61 crltgtteva llaeiaelse edkanapffl pylsgertph ndpdargifw gmthaslraq
      121 lgyavlegvs fgindglqal kesgtpiaqc slvgggarsp fwaqlladil ampvvthkgg
      181 etggalgaar laclaagkpi aavcekpevw qtwradpirh htlmqryaqf kalylndlhy
      241 rqh
//
LOCUS       WP_258014466              49 aa            linear   BCT 02-MAR-2025
DEFINITION  DMT family transporter, partial [Listeria monocytogenes].
ACCESSION   WP_258014466
VERSION     WP_258014466.1
KEYWORDS    RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016535.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04657.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..49
                     /organism="Listeria monocytogenes"
                     /db_xref="taxon:1639"
     Protein         <1..49
                     /product="DMT family transporter"
     Region          <1..49
                     /region_name="ydcZ"
                     /note="Uncharacterized membrane protein YdcZ, DUF606
                     family [Function unknown]; COG3238"
                     /db_xref="CDD:442470"
ORIGIN      
        1 vvlalcgqmi ialiidhfgf fgviphpinr yrmigvllml vgvfliqrf
//
LOCUS       WP_258014509            4109 aa            linear   BCT 02-MAR-2025
DEFINITION  hemagglutinin repeat-containing protein [Stenotrophomonas
            maltophilia].
ACCESSION   WP_258014509
VERSION     WP_258014509.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024728.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13332.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4109
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..4109
                     /product="hemagglutinin repeat-containing protein"
                     /calculated_mol_wt=415992
     Region          1..>21
                     /region_name="ESPR"
                     /note="Extended Signal Peptide of Type V secretion system;
                     pfam13018"
                     /db_xref="CDD:463773"
     Region          67..329
                     /region_name="TPS"
                     /note="TPS secretion domain; pfam05860"
                     /db_xref="CDD:461762"
     Region          84..1731
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          331..349
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          351..370
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          372..389
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          391..412
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          487..506
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          508..544
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          546..564
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          566..587
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          589..608
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          610..669
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          615..630
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          671..692
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          694..712
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          714..734
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          736..754
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          756..773
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          775..796
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          798..816
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          818..839
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          841..860
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          862..883
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          885..903
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          905..924
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          927..965
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          967..988
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          990..1008
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1010..1031
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1038..1052
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1054..1074
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1076..1113
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1115..1134
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1137..1155
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1157..1177
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1179..1197
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1199..1239
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1241..1259
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1261..1282
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1284..1301
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1306..1324
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1327..1345
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1347..1366
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1368..1386
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1388..1407
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1409..1428
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1430..1449
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1456..1474
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1476..1495
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1497..1515
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1517..1536
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1564..1582
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1584..1603
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1605..1622
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1625..1643
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1645..1663
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1664..1683
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1685..1701
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1704..1723
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1725..1740
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1744..1770
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1772..1791
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1793..1823
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2403..3847
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          2747..2873
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          2942..3101
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          3259..3424
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
ORIGIN      
        1 mntiyrlvfn ralrvwqvas elvkgggglv ghapgrrsaa lsplgfalmc slgwvslatp
       61 alaqsdarii sdpnapgrer ptmvtapngv pmvnittpsa agvsrnrysq fdvgregvil
      121 nnargqvqtq lggwvqgnpw latgsarvil nevngpasrl ngyvevagqr aeviianpag
      181 iqvngggfln asrvtlttgt pmftgagale gyrviggaiq idgagldtsr adytdlitrs
      241 lkvnagiwan qlqatlgnnv vnadhsqasl ipangevptf aldvgalggm fankiwlvgn
      301 ehgvgvrnag sigaqagelv vtvggrlent galqslqnvr lqargdlana gtiaatreva
      361 ittggtldns ggklnaqrlq veaqglrnhg gtieqtgvqa lalkaeaarn rsngllgald
      421 avasggnggg pgggtspgsg ggtpgtgapg tgtpgtgggs tgtptspvvp maegliaiag
      481 mldndggsia nggavslaar agldnsggrl gvsalqagge lrndggtlqv hgdaalhvgl
      541 lsnqkgalsv agglrldaqs ldnrggelrh agkaasswtv qglfnndggl latnaaqlal
      601 qagqvgnagg riehageggl tldtgdwagp ggrlstvgrl hwttgsadlr ngalsaagfd
      661 ivagmldnrg gsllslgtga ssvkasnldn gaggtlagng dlivtattld nskglvqqag
      721 tgslsvqant lhgsegrlls ngalvlsgge ldvsggttsa qsvqiharal rnrqgqivsq
      781 gvselaldvr daldnqggqi vgngglrida gridnqkgtl ksagtqgval tvrdtldnsg
      841 ggisgngqvq lqvgglvnqr gkvlaagsga lqvqarerld nsdggrlagt gdlrlqaasl
      901 dnrsgaieha gggtlqirad slqgaggril sqsalelegg dlllgagstt qaeriaidaq
      961 rldntggnls atgsdalrlh vaqrvdnsgg tiagngaldv qagelinrtg tlsgagtads
     1021 tlqivgaldn hegtiasnan rltiaaarld nsggsirqag nqgldittgr ldgskgtlvs
     1081 satltlradd vdhrdatlga drfdleattl dnaggriias gegasrvkat algnaggtla
     1141 sngdltllar tldnsagriq hagsgqlqvs aqallgkggs vlsngsfvld gasldlsgat
     1201 tsarrvaisa gtlttaggtl tatgedalrl rvqgvldnrg gslasngald viaqqlnnaq
     1261 gtlqgagagh stlaigqald nqkgrillgg agtvtaaslg nqggtvhagg stlvlgvdgr
     1321 ldngeqglls stgtvtldag sldnrhgtlv agkdltvtta agvdnsdgam qagerlqlqg
     1381 ngldnqrgtl lggqldidtr gqrldnragt lgtqkgalnv hsgvldnqgg rvqsaadlti
     1441 ntagqdidnr ftagsgglla agklqlegsv ldnrggavna qgdarlllar vdnsaggtla
     1501 saadlslraa slanaggrvq agrnldltld ghldnaagai aagqrltlta asvdnrntrg
     1561 gdgthglqag qlqfgaqwld nsqgqvvtdg sarlqingql qntggvistg gnldsqadnv
     1621 ansggllrad gsqtlvarvl sedgqvhaqr dlgltlqqgm rhrgewiang tlslnlsgdl
     1681 dnqgvvrggn ldlnaqnitn aasgeissqg tthlnargql tnrglidgal thleageidn
     1741 lgtgriygdh vaistgvlkn raeeadgatr vgtvaarerl dlgvrelqnt gkgliysggd
     1801 aaiggalgad riasgiagri dnissvidvg gnlsidaqvv nnirenvvis qtrsvmdpvr
     1861 ldrpawwrng kngtedirst shysahevyy ldpadiledt phitpdgfvv hravvrlssk
     1921 tsayffgrgg lyaglgerar lnvqdgtvvm yyvgrqdnqv npdqvrvgad dpftelsglh
     1981 pnapafryvd dkltyssnyg tcttncvqlw tykdysdpdh tltnprgsgg sdvssneqyr
     2041 iatrtvtedv lgagvgadav irsggamrig tdnlknhygs iaaggnlsiv gltatakven
     2101 laqtlfrthe fnnvghtysn ervtwsneti seeigriggs itsggtlvid vgdlsnlnqg
     2161 rnapnvqngs amanlnvqgp kalpdgpgqg gaqgpgqstg tgaeralaqa adaagtqqgg
     2221 svggvtgnsa tsgprvvaas ggspdriamg apdtrapsas lfnvnpnggh ylvetdprft
     2281 dhktwlssdh llgqmgyspd tvqkrlgdgy yeqklvreqi gqltgrrfld gyasdeaqyr
     2341 alleagatva sewglrpgva lteaqmaqlt sdivwlveqt vtladgstat alvpqvylrl
     2401 rpgdldgqga llaganvdik lgnglvntgn iagrklvtid agniehlggg isgqyvglss
     2461 dkdiritgat vtatdalsvk aagnvtvast vetqrgggty qyetnridrv aglyvtnpng
     2521 dgalsvaagg dislkaaqih nagkegitql vaggnielga laldqrqdat fddrnhqhgs
     2581 qtthavssvq gggdvvlsag kditlaaaql aaaggmalra egdinslavv dgksfdsava
     2641 gkrssrqvtq sdevvrgsql qangslllaa drdvnltaak vasadgtlsv aagrdvnlls
     2701 aneshhftld tydkkrktls sttttthaes dgsyaigtgl qgerisvsag rdltavgavv
     2761 datgnvslaa gnnvliaaae dhlsresses rkksgvtggf sngtasvgys ssrsnsaqae
     2821 qsttqvgsai asregsvvis agnqltiaas dvaasrdlal vgkdinllar qdtvdsqvsq
     2881 sskssgfsvg vtydpakayr sardkategm adsgtmmgri trtgegmaag vaaavmpavt
     2941 agsqrsnsnq thsssdarvt qlsaggnlsl ianggsitsq gaqmsaegda vllatrdiaf
     3001 dvahntersd rdsrgkgwgl atnssglpvg tnnarsegmg qsdtitgtql svggsvrmat
     3061 tegdisltaa niaaqkdvti rsagdltirs gqdtvtnanh sdsraigtvq isdtekfsgw
     3121 hrekhsddrg qvaqvssnvg slggnvniia dgkytqtasn vvaakdvnis aaeielltad
     3181 esghysqsnd dlkigafarv ksplidlinn vdaarksdgr lqamqsmaag gnayqaasai
     3241 samsgnaggg sllsaeagvg fktasssadg ssqvsrgsti qgggsvnlts tqgdihvvqg
     3301 nlsaggtlsl dsagdirlea gkahvtdrsk ssnagaevgv gvsvgaqtgv yvyaeasvgs
     3361 sksnsdsstw qnttltgkni smkaegdtil rgatatadri dvqtggmltv eslqdmaesm
     3421 srnsqvggrv qvsfgtawnv sgnasagkad ghyqgvgqqs glfagnggyh vdagkvnlvg
     3481 gaitstnaan selsaqsltf tdlqnemayk assgsisggf gstgkaqtda ngnklpppsg
     3541 gqqlkdignt lssgdfgkln tanfsggvpm hergsdssst ratltegnit iggkkttase
     3601 lglntdataa heaiaalpnt aklladqqal aaaagtvist gqqirgdina sidqakrrrd
     3661 nataamndpq tsleqklala iatdranaei erlqkagvlv taiagglaas sgstgeilag
     3721 tlapavsyqi gqyfkqnpar nvadngdrgg egsathllah avlgaaiasa ggdsalvgai
     3781 aaagaeaaap avsrllfgkd sknltsaeqd tvsaivsasg avmgsfqdgl mtagvgsgaa
     3841 knaadnnwge vghystmatv lylagfseqd akavalaaws pdtdfrnait vknyvkglgs
     3901 kgdqidhhgl dgnkspeevv kmqqdlgekv tqiliqlken qdnptakadi lsnaenqril
     3961 hlfgdsfahv qedgthyngg nghlkhgtrp depdkhpday rnfvsallga astangsagg
     4021 lgnlntltds viastsektq kealaaaaga vggndrglvd spvagcevyq kcgpnkanav
     4081 irdiyqvapv eapnvdfskl nmpvewsrr
//
LOCUS       WP_258014603             472 aa            linear   BCT 02-MAR-2025
DEFINITION  FKBP-type peptidyl-prolyl cis-trans isomerase [Klebsiella
            pneumoniae].
ACCESSION   WP_258014603
VERSION     WP_258014603.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012478.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00254.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..472
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /EC_number="5.2.1.8"
                     /GO_function="GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /calculated_mol_wt=51032
     Region          <22..>301
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          252..471
                     /region_name="PRK10902"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     Provisional"
                     /db_xref="CDD:236791"
ORIGIN      
        1 mqnnnlqqsq aaarqqiqql ttqiqqaeae nkrlsasftt lnkdkhalmt qlaatekekq
       61 aaleqvkaln adkqplttrl aaaekekqav leqvkalnad kqsltirlaa aekaqqaavd
      121 qvkalnadkq platrlaaae kekqavleqv kalsadkqsl tirlaaaeka qqaaldqaka
      181 lnadkqplat rlaaadkaph gpandaaapk neppemaaiv aayrlqadkd naqlrmkede
      241 iellrtqlsv qsktrsgesa aaklsasgeq qayaigasmg sealnvlttr rtqgvtvdag
      301 lvlqgiedaf rgqlrlgeqe rnkalfdvsq qvyqnlnkie qknisagkky qqafarkkdv
      361 vfkegvysrv dypgkgkisg ndlvtvvike mltdgtvind meakdqaltq kldayppvfr
      421 eplkrlqnhg svtlvvppek aygskglppk ippgatmvys vrivdsqpep ak
//
LOCUS       WP_258014639             138 aa            linear   BCT 02-MAR-2025
DEFINITION  amino acid permease, partial [Listeria monocytogenes].
ACCESSION   WP_258014639
VERSION     WP_258014639.1
KEYWORDS    RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Listeria monocytogenes"
                     /db_xref="taxon:1639"
     Protein         1..>138
                     /product="amino acid permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          4..>138
                     /region_name="2A0307_GadC"
                     /note="glutamate:gamma-aminobutyrate antiporter;
                     TIGR00910"
                     /db_xref="CDD:129988"
ORIGIN      
        1 mskqaksltl fgffaitasm vmtvyeyptf atsgfhlvff lllggflwfl pvalcaaema
       61 tvdgwqeggi fswvgntlge rfgfaaiffq wfqitvgfvt miyfilgals yvfdfpales
      121 npfikfigvl vifwgltf
//
LOCUS       WP_258014926             331 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: lytic polysaccharide monooxygenase [Stenotrophomonas
            maltophilia group].
ACCESSION   WP_258014926
VERSION     WP_258014926.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia group
  ORGANISM  Stenotrophomonas maltophilia group
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (residues 1 to 331)
  AUTHORS   Forsberg,Z., Mackenzie,A.K., Sorlie,M., Rohr,A.K., Helland,R.,
            Arvai,A.S., Vaaje-Kolstad,G. and Eijsink,V.G.
  TITLE     Structural and functional characterization of a conserved pair of
            bacterial cellulose-oxidizing lytic polysaccharide monooxygenases
  JOURNAL   Proc Natl Acad Sci U S A 111 (23), 8446-8451 (2014)
   PUBMED   24912171
REFERENCE   2  (residues 1 to 331)
  AUTHORS   Schnellmann,J., Zeltins,A., Blaak,H. and Schrempf,H.
  TITLE     The novel lectin-like protein CHB1 is encoded by a chitin-inducible
            Streptomyces olivaceoviridis gene and binds specifically to
            crystalline alpha-chitin of fungi and other organisms
  JOURNAL   Mol Microbiol 13 (5), 807-819 (1994)
   PUBMED   7815940
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015054.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03067.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Stenotrophomonas maltophilia group"
                     /db_xref="taxon:995085"
     Protein         1..331
                     /product="lytic polysaccharide monooxygenase"
                     /calculated_mol_wt=35715
     Region          85..329
                     /region_name="PRK13211"
                     /note="N-acetylglucosamine-binding protein GbpA"
                     /db_xref="CDD:237309"
ORIGIN      
        1 marclgallt rcrrrcgsrr llpgpqcfeq raadqarqpl ksnlsgiagl sacedsrgfp
       61 tprkgisact cpigqsshcp sltdwpttpi radargrytf efhapaphat rewkfyvtre
      121 grqpgsplhw adlqefctlg nvpvdgktyk ldcpqapppq wqdagpvtar galetgttlt
      181 lrvfnangnd lerpevtlaa gqtapaqwpm vlarkvkgcg qharigvmkn gvitpvasai
      241 enrvylkpgn rfeletripg pvdpvdppgg dfdfvypagl gsytpgetvv kgtdgkpyac
      301 rpfpdgawcn inadayragt gsawrdawia c
//
LOCUS       WP_258014934            4209 aa            linear   BCT 02-MAR-2025
DEFINITION  hemagglutinin repeat-containing protein [Stenotrophomonas
            maltophilia].
ACCESSION   WP_258014934
VERSION     WP_258014934.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024728.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13332.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4209
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..4209
                     /product="hemagglutinin repeat-containing protein"
                     /calculated_mol_wt=426319
     Region          1..>22
                     /region_name="ESPR"
                     /note="Extended Signal Peptide of Type V secretion system;
                     pfam13018"
                     /db_xref="CDD:463773"
     Region          67..329
                     /region_name="TPS"
                     /note="TPS secretion domain; pfam05860"
                     /db_xref="CDD:461762"
     Region          203..1858
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          331..349
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          351..370
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          372..389
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          391..412
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          488..507
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          509..525
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          527..545
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          547..565
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          567..588
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          590..609
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          611..631
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          633..650
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          653..692
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          695..713
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          715..735
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          737..755
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          756..774
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          776..797
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          799..817
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          819..860
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          862..883
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          886..903
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          906..926
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          928..946
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          948..966
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          968..989
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          996..1032
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1034..1053
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1055..1075
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1077..1094
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1097..1114
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1116..1136
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1138..1156
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1158..1178
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1242..1260
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1262..1283
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1285..1303
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1305..1324
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1328..1346
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1348..1367
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1369..1387
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1389..1408
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1410..1429
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1431..1450
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1457..1475
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1477..1496
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1498..1516
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1518..1537
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1565..1583
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1585..1604
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1606..1623
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1626..1644
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1646..1664
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1665..1684
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1686..1702
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1705..1724
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1745..1761
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1773..1791
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1805..1824
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1826..1844
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2023..3411
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          2737..2873
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          2942..3108
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          3260..3425
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          3357..3510
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          3781..3832
                     /region_name="PT-VENN"
                     /note="Pre-toxin domain with VENN motif; pfam04829"
                     /db_xref="CDD:428147"
ORIGIN      
        1 mntiyrlvfn ralrvwqvas elvkgggglv ghvpgrqsaa lsplgfalmc slgwvslvtp
       61 alaqsdarii sdpnapgrer ptmvtapngv pmvnittpsa agvsrnrysq fdvgrdgvil
      121 nnargqvqtq lggwvqgnpw latgsarvil nevngpasrl ngyvevagqr aeviianpag
      181 iqvngggfln asrvtlttgt pmftgaggle gyrvtggaiq idgdgldtsr adytdlitrs
      241 lqvnagiwan qlqatlgnnv vsadhsqasa taasgeaptf aldvgalggm fankiwlvgn
      301 ehgvgvrnag sigaqagelv vtvdgrlent galqsrqnvr vqasgdlang gtiaatreva
      361 itaggtldns ggtlnaqrlq veaqglrnhg gaieqtgaqa lavkadaasn rsngllgald
      421 avasggngss agsgaspgng ggipgtgtpg tpgtgggngg sagtptspel plaegliaia
      481 gtldndggsi snggtvslta rngldnsggr lgvsalqagg elrndggmlq vhgdaalqvg
      541 llsnqkgals vagdlwldaq sldnrggelr hagkaasswt vqglfnndgg llatnatqla
      601 lragqvgnag griehaggdg lalvtgdwag sggrlstlgr lqwsagnadl rsgslsaagf
      661 dilaatldnr ggsllslgsg assvkattld nrargtlagn gdlalvattl dnsnglvqqa
      721 gtgtlsvqad tlrgsegrll sngalvlsgg eldvsggtts aqsvqihaga lrnrqgqivs
      781 qgvsalaldv rdaldnqggq ivgngglrid agridnqkgt lqsagtqgvs lavrdtldns
      841 gggisgngqv qlqvgslvnq ggkvlaagsg alqvqarerl dnsnggrlag tgdvqlqaar
      901 ldnrggaieh agsgtlqira dslqgaagri lsqssltleg gelvlgagsv tqaeriaida
      961 qrldnaggsl satgseallv rvaqaldnsg gtiagngald vqagelinrk gtlsgagtad
     1021 stlqivgald nhegtiasna nrltvtsarl dnsggsirqa gnlgldittg rldgskgtlv
     1081 ssatltlrag dvdhrdatlg adrldleatt ldnaggriia sgegasrika ttlgnaggtl
     1141 asngdlalla qaldnragri qhagsgqlqv saktllgngg svlsngsfal dganldltaa
     1201 ttsarrvdit adtlttaggt ltatgedalr lrvqgvldnr ggtlagngvl dltaqqlina
     1261 qgtlqgagag hstlaigqal dnqkgrillg gagtvtaasl gnqggtvhag gsalvlgvdg
     1321 rldngdqgll sstgtltlga gsldnrhgtl vagkdlsatt aagvdnsdga mqagerlqlq
     1381 gngldnqrgt llggqldidt rgqrldnrag tlgtqkgals vrsgamdnqg grvqsaadla
     1441 intagqdidn ratagsggll aagklqlegg vldnrggavn aqgdarllla rvdnsaggtl
     1501 asaanlslqa aslanaggrv qagrnldltl dghldnaaga iaagqlltlt aasvdnrntr
     1561 ggdgtrglqa gqlqfgaqwl dnsqgqvvtd ggarlqingq lqntggvist ggnldsqadn
     1621 vansggllra dgsqtlvara lsedgqvhaq rdlgltlqqg mrhrgewian gtlslnlsgd
     1681 ldnqgvvrgg nldlnaqnit naasgeissq gtthlnargq lsnrglidga lthleaseid
     1741 nlgtgriygd rvaistgvlk nraeeaagat rvgtvaarer ldlgvrelqn tgkgliysgg
     1801 daaiggtlsa driasgiagr idnissvidv tgnlsidaqv vnnirenvvi tqtttvnapv
     1861 rmdrpawwrn gkngtedirs tshysahevy yldpadiled tphitpdgft vhravvrlta
     1921 qtsayffgrg glyaalgera rlnvqdgtvv myyvgrqdnq vnpdqvaaga ddpfaelatl
     1981 hpdspafryv ddkltyssay gtcttncvql wtykdydpdr iltspqfagg nstsaneqyr
     2041 latrtvtedv lqpsvgadav irsggvmrir sddlrnhygs iaaggdldii gltgaakven
     2101 laatlyrthq fsnvshtfgg dvmtwsapai sevtgkiggs ivsggslsid vgdlsnlnqg
     2161 rnapnvqngs amanlnvqgp kalpdgqghg gaqgpgqstg tgaeralsqa adaagtqqgg
     2221 nvggvsgntg tsgprvvaas ggspdriamg apdtrapsas lfnvnpnggh ylvetdprft
     2281 dhktwlssdh llgqmgyspd tvqkrlgdgy yeqklvreqi gqltgrrfld gyasdeaqyr
     2341 alleagatva sewglrpgva lteaqmaqlt sdivwlveqt vtladgsttt alvpqvymrl
     2401 rpgdldgnga llaganvdin lgnglvntgn iagrklvtid agniehlggs isgqyvglss
     2461 dkdirvagaa vtatdalsvk aagnvtvast vetqqgggty qyetnridrv aglyvtnpsg
     2521 dgmlsvvagg dislqaaqir ntgadgltql aaggtldvga ialeerrdat fdernhqrss
     2581 rtthaatsvq gagdvvlaag kdinlaaaqi kaagglalqa ggdinsqalv dsesrdfasa
     2641 gkrsslqvsq rdetvrgstl qagdnlllna grdvnltaal vdsndgavsv aagrdvnlls
     2701 snethdysld sydkkkktls sttttrsvda sdsyaigtai qgerinitag rdltavgavv
     2761 datgnvilga gnnvlitaae dhhssesnes kkksgvtggf gngvasvgys saknssthae
     2821 qsttqvgsai asrdgnvlin agntltieas dvaagenltl vgkdiallar qdtsdsqssq
     2881 askssgfsvg vtydptkayr sardsttdgm adsgsamgri trtaegaasg lraattstvv
     2941 tagsqrtnse qshstsdarv sqlaaggdlt lianggsils lgtqmsaegn avllatqdiv
     3001 fdvahnters dsssrgkgwg fanntsglpf gtnnaqsqgs gssdtitgtq lsvgggvrma
     3061 ttegnislta aniaaekdvs iraagdllvr sgqdtvsnan tsdskaigsv qisdtekfsg
     3121 whreqhqdds aqvsqvassi gslggsvslt aggkytqtas nvvaakdvni taaeiellta
     3181 desghysqsd kdlkigvfar vksplidlin nvdaarqsdd rlqkmqgmaa ganayqaasa
     3241 isalsgrggs gelfraeagi gfktanssad gssmvsrgst iqgggnvnlt stqgdihvvq
     3301 gnlsagntls ldsagdille agkayvadrs kssnagaeig vgvsvgaqtg vyvyaeasvg
     3361 sskanaesst wqnttltgkn ismkaegdtt lrgatatadr idvktggtlt ieslqdiaes
     3421 msrnsqvggr vqvsfgtawn adgyasagka sgsyqgvgqq sglfagnggy hvdaghvnlv
     3481 ggaiastnag nseltadslt ftdlqnhmdy aassgsisgg aggqmdgwap kpgtaaprgg
     3541 pglpmmetgs dssstlatlt egnitiggkq tsaaelgint dasgahrald alpdanklla
     3601 dqqamaaaag tvmatsqqia wdigsadakk itdkyrepms peekrafdal lpxeqfkrlv
     3661 afdasypbal xtqqkwapdg vygralgavx salvggvegq glgqlgsnal apyaaeligk
     3721 tfdpnkqsav pseamqmlsh allgallaea nggkagsgal aagggelaak fltdklfggd
     3781 psnlspqere tvlalsqavg alagglsgqd lagialnagi arnsvennfl gkddqqrlad
     3841 lrekskkgkl tpqesaeliy ldagdhmsdg llnmlasgqp lsvvqqhnle lylgayaqqn
     3901 gtdaaialvs ggireasefp ysglsrdkqk ytdenfsffe kniwradsen eaifnkaiir
     3961 sglevwrsed llptvmrqrr dfalmdalvg splasgsylf gslvglsddd ryaltmtagn
     4021 ialiagataa gktgllpvtg rlginpagsg atkssassrs resprgdgis ssaqteagkg
     4081 dsnagkllng gagrpgepas sligadraii dprklegyal npdhpvggnk arvfesvlgf
     4141 nksnsdvlmk qlqegvakiq ptpgkvdeyg arytvdipvi gpkgpgvvrt gwiyrsgsdt
     4201 pelttlfvk
//
LOCUS       WP_258014974             277 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: XVIPCD domain-containing protein [Stenotrophomonas
            maltophilia group].
ACCESSION   WP_258014974
VERSION     WP_258014974.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia group
  ORGANISM  Stenotrophomonas maltophilia group
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (residues 1 to 277)
  AUTHORS   Oka,G.U., Souza,D.P., Cenens,W., Matsuyama,B.Y., Cardoso,M.V.C.,
            Oliveira,L.C., da Silva Lima,F., Cuccovia,I.M., Guzzo,C.R.,
            Salinas,R.K. and Farah,C.S.
  TITLE     Structural basis for effector recognition by an antibacterial type
            IV secretion system
  JOURNAL   Proc Natl Acad Sci U S A 119 (1) (2022)
   PUBMED   34983846
REFERENCE   2  (residues 1 to 277)
  AUTHORS   Souza,D.P., Oka,G.U., Alvarez-Martinez,C.E., Bisson-Filho,A.W.,
            Dunger,G., Hobeika,L., Cavalcante,N.S., Alegria,M.C., Barbosa,L.R.,
            Salinas,R.K., Guzzo,C.R. and Farah,C.S.
  TITLE     Bacterial killing via a type IV secretion system
  JOURNAL   Nat Commun 6, 6453 (2015)
   PUBMED   25743609
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 277)
  AUTHORS   Alegria,M.C., Souza,D.P., Andrade,M.O., Docena,C., Khater,L.,
            Ramos,C.H., da Silva,A.C. and Farah,C.S.
  TITLE     Identification of new protein-protein interactions involving the
            products of the chromosome- and plasmid-encoded type IV secretion
            loci of the phytopathogen Xanthomonas axonopodis pv. citri
  JOURNAL   J Bacteriol 187 (7), 2315-2325 (2005)
   PUBMED   15774874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042736.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20410.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Stenotrophomonas maltophilia group"
                     /db_xref="taxon:995085"
     Protein         1..277
                     /product="XVIPCD domain-containing protein"
                     /calculated_mol_wt=30879
     Region          151..249
                     /region_name="DUF6696"
                     /note="Domain of unknown function (DUF6696); pfam20410"
                     /db_xref="CDD:466559"
ORIGIN      
        1 mgneranpsl gkvddtdlrv ydkprferti eiskeqydri lefsadpkkh gfdmnydffs
       61 nactdfawgv lnhaglrpvg lageitnyeg atkvldnira vnaipqqvkd seldrvqwnp
      121 mpkqtfrewm ftengeqwrg nsslaasgtp adpahedhar lnqihqqvad lgafgarngn
      181 vsasllalsk eqqfsrvdev vlgeprgdta pklfivqgdr ndpahqrasv paelaaqapv
      241 etsfervaql qqnppqrdvq hlqeeqqlqq shgprma
//
LOCUS       WP_258015027             235 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase, partial [Klebsiella pneumoniae].
ACCESSION   WP_258015027
VERSION     WP_258015027.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 235)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 235)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>235
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          3..>235
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mylgidlgts evkalviden heviashsap lsiqrphphw seqapelwwe ateylmatlr
       61 ekcaqhwpai kaiglsgqmh gavlldaege airpailwnd trcaaecael eamapelhqv
      121 agnlampgft apkllwvrrh epehfqrtat vllpkdylry rmtgkkvsdm sdaagtlwld
      181 vakrdwsdal ldkcglsrsq mptlvegcev satldpqvaa rwglnasvmv agggg
//
LOCUS       WP_258015086             261 aa            linear   BCT 02-MAR-2025
DEFINITION  phage antirepressor KilAC domain-containing protein
            [Stenotrophomonas maltophilia].
ACCESSION   WP_258015086
VERSION     WP_258015086.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (residues 1 to 261)
  AUTHORS   Iyer,L.M., Koonin,E.V. and Aravind,L.
  TITLE     Extensive domain shuffling in transcription regulators of DNA
            viruses and implications for the origin of fungal APSES
            transcription factors
  JOURNAL   Genome Biol 3 (3), RESEARCH0012 (2002)
   PUBMED   11897024
REFERENCE   2  (residues 1 to 261)
  AUTHORS   Heinrich,J., Velleman,M. and Schuster,H.
  TITLE     The tripartite immunity system of phages P1 and P7
  JOURNAL   FEMS Microbiol Rev 17 (1-2), 121-126 (1995)
   PUBMED   7669337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015340.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03374.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..261
                     /product="phage antirepressor KilAC domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=28813
     Region          3..102
                     /region_name="KilA-N"
                     /note="KilA-N domain; pfam04383"
                     /db_xref="CDD:367917"
     Region          <120..235
                     /region_name="KilAC"
                     /note="Phage antirepressor protein YoqD, KilAC domain
                     [Mobilome: prophages, transposons]; COG3645"
                     /db_xref="CDD:442862"
ORIGIN      
        1 mmiggatvrr ddvgrfclnd lhqaaggakr hqpsdwqrlk qteelvaelv nsgesrvypv
       61 hsvagryggs yvvrelvyay amwispsfsl qviraydala agapapdpmq altdpatlra
      121 lllsysekae ilearvqyqe pqvrallrlt qadgafnist aakmlqvqpr qlfawlsehg
      181 wiyrragskn wlayqtrlqq gvlahkasmq rregepdrvh eqvlvtakgl srlaesidrg
      241 qmswaqadaa talqlaaevs p
//
LOCUS       WP_258015142             536 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Stenotrophomonas maltophilia].
ACCESSION   WP_258015142
VERSION     WP_258015142.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024700.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13304.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..536
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=59337
     Region          15..361
                     /region_name="YbjD"
                     /note="Predicted ATP-dependent endonuclease of the OLD
                     family, contains P-loop ATPase and TOPRIM domains
                     [Replication, recombination and repair]; COG3593"
                     /db_xref="CDD:442812"
ORIGIN      
        1 mpfefsipts aasalrivlk egeslivvga ngsgktrlaa wieqnfgera hrisahralt
       61 lkpgvpkire sdalqglrfg ttgsnvslah rthnrwgkde aggilndfdy llqalfaeqs
      121 rtallshkra rsgdhtaaap tkferlqliw eqllphrelv vsgddiqaqr sggnslysas
      181 smsdgeraif yllgqalmaa enslfivdep elhmhrsims klwdriener pdcafvfith
      241 dlefatsrvg qkvvigdyqs dtpswsvesv pedsgfseel ttlllgsrrp ilfvegdmss
      301 ldkaiyrciy pgwtviprgs ckdvlhavst mksnatltri tcvgivdadg ydneeiealn
      361 egsvhvlpvs eienllmlpe vsreiaaadh msdaeieerq aqlydalfah vsqddvieat
      421 varyclrrid ralkktdlsk sktveaiakn yasqvqtlni eaiadqrrar ikeavsqrdv
      481 pellalvddk gmladaaskl knttralfes wltrvlmner apqlvaqlkt klpeid
//
LOCUS       WP_258015155             169 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin-binding protein, partial [Stenotrophomonas
            maltophilia].
ACCESSION   WP_258015155
VERSION     WP_258015155.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (residues 1 to 169)
  AUTHORS   Sola,M., Kneussel,M., Heck,I.S., Betz,H. and Weissenhorn,W.
  TITLE     X-ray crystal structure of the trimeric N-terminal domain of
            gephyrin
  JOURNAL   J Biol Chem 276 (27), 25294-25301 (2001)
   PUBMED   11325967
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013183.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00994.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         <1..169
                     /product="molybdopterin-binding protein"
     Region          <1..169
                     /region_name="moaC"
                     /note="bifunctional molybdenum cofactor biosynthesis
                     protein MoaC/MogA; Provisional; PRK03604"
                     /db_xref="CDD:235138"
ORIGIN      
        1 rfkprapkgl egaacavitl sdrasdgtye disgptlvtg lkklggevva aevlpdgiep
       61 lagrlqalaa egvrlclctg gtglgprdlt pealrslnar pvhglaqmvr alsaqhtpma
      121 wlsraevvql gnmlvfalpg spkaaaqcld ilapvlghal amvegdghs
//
LOCUS       WP_258015267             126 aa            linear   BCT 02-MAR-2025
DEFINITION  PDZ domain-containing protein [Stenotrophomonas maltophilia].
ACCESSION   WP_258015267
VERSION     WP_258015267.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17820.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..126
                     /product="PDZ domain-containing protein"
                     /calculated_mol_wt=13866
     Region          46..95
                     /region_name="PDZ_6"
                     /note="PDZ domain; pfam17820"
                     /db_xref="CDD:436067"
ORIGIN      
        1 mrarwmllvm llplpalagg gnsqtlewrq ddarlalrst egqvhvdaas pearfgvrsg
       61 drilrvddta vrrvehlada lrhttgptvy lllrrdrrem tvpvnaaawr lalvappppa
      121 ppparr
//
LOCUS       WP_258015306              75 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Stenotrophomonas maltophilia].
ACCESSION   WP_258015306
VERSION     WP_258015306.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (residues 1 to 75)
  AUTHORS   Mullin,D.A., Zies,D.L., Mullin,A.H., Caballera,N. and Ely,B.
  TITLE     Genetic organization and transposition properties of IS511
  JOURNAL   Mol Gen Genet 254 (4), 456-463 (1997)
   PUBMED   9180700
REFERENCE   2  (residues 1 to 75)
  AUTHORS   Fischer,J., Maier,H., Viell,P. and Altenbuchner,J.
  TITLE     The use of an improved transposon mutagenesis system for DNA
            sequencing leads to the characterization of a new insertion
            sequence of Streptomyces lividans 66
  JOURNAL   Gene 180 (1-2), 81-89 (1996)
   PUBMED   8973350
REFERENCE   3  (residues 1 to 75)
  AUTHORS   Zekri,S. and Toro,N.
  TITLE     Identification and nucleotide sequence of Rhizobium meliloti
            insertion sequence ISRm6, a small transposable element that belongs
            to the IS3 family
  JOURNAL   Gene 175 (1-2), 43-48 (1996)
   PUBMED   8917074
  REMARK    Erratum:[Gene 1997 Mar 25;188(1):149]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01527.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..75
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=8226
     Region          <1..41
                     /region_name="HTH_ARSR"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; cl46857"
                     /db_xref="CDD:481197"
ORIGIN      
        1 msiaeatfyv wrknygglgp pelmrlrlle denrklkqlv adlsldkaml qevvtkssed
       61 dpesclggta tgaiw
//
LOCUS       WP_258015354             254 aa            linear   BCT 02-MAR-2025
DEFINITION  MATE family efflux transporter, partial [Listeria monocytogenes].
ACCESSION   WP_258015354
VERSION     WP_258015354.1
KEYWORDS    RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01554.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Listeria monocytogenes"
                     /db_xref="taxon:1639"
     Protein         <1..254
                     /product="MATE family efflux transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <1..254
                     /region_name="MATE_multi_FepA"
                     /note="multidrug efflux MATE transporter FepA; NF000217"
                     /db_xref="CDD:411080"
ORIGIN      
        1 ewgvtgsala tmiaiiigvl ilithffkks srlkfvkvdw nkaffkktla iglpsflaev
       61 gvsvftlgyn isiaaiagta gvaafsvlny thsvilmlfl gmgsaiqpli syyrgakarq
      121 keietlkiai mvafstgvgf llvglfgsnl lvsmfgnfsp eikdlasngi klfytaylfm
      181 gfnfvmmtyf qtsdkvkmat witisreiif mvifllvlpp iigipgvwla ipisemivaa
      241 siifymkkkh ilfk
//
LOCUS       WP_258015378             341 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase TerL endonuclease subunit, partial [Listeria
            monocytogenes].
ACCESSION   WP_258015378
VERSION     WP_258015378.1
KEYWORDS    RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (residues 1 to 341)
  AUTHORS   Xu,R.G., Jenkins,H.T., Chechik,M., Blagova,E.V., Lopatina,A.,
            Klimuk,E., Minakhin,L., Severinov,K., Greive,S.J. and Antson,A.A.
  TITLE     Viral genome packaging terminase cleaves DNA using the canonical
            RuvC-like two-metal catalysis mechanism
  JOURNAL   Nucleic Acids Res 45 (6), 3580-3590 (2017)
   PUBMED   28100693
REFERENCE   2  (residues 1 to 341)
  AUTHORS   Hilbert,B.J., Hayes,J.A., Stone,N.P., Duffy,C.M., Sankaran,B. and
            Kelch,B.A.
  TITLE     Structure and mechanism of the ATPase that powers viral genome
            packaging
  JOURNAL   Proc Natl Acad Sci U S A 112 (29), E3792-E3799 (2015)
   PUBMED   26150523
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042863.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20441.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Listeria monocytogenes"
                     /db_xref="taxon:1639"
     Protein         <1..341
                     /product="terminase TerL endonuclease subunit"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
     Region          <1..335
                     /region_name="YmfN"
                     /note="Phage terminase-like protein, large subunit,
                     contains N-terminal HTH domain [Mobilome: prophages,
                     transposons]; COG4626"
                     /db_xref="CDD:443665"
ORIGIN      
        1 glgkvanpre ffigtngfvr agfydkleer skailsgenl ndrmfpfick lddpeevkne
       61 amwekanpaf ekplsprskr llnkvrkqye altnnpsgre afmtkrmnlp evdlekvvap
      121 wedilatnre mpelqnraci gafdyasvkd faavgllfrv gddyiwkths farkgyldia
      181 nlkppikewe kqglltivde ptidprhvvn wfvemretyg iqkvigdnfr mdlmrplfea
      241 egfeleiirn praahsllap rietlfanhr ivfgdnplmr wytnnvavki kpdgnkeylk
      301 kdehrrktdg fqafvhalwr adeiedidve evlnmlnaia f
//
LOCUS       WP_258015384             233 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Listeria monocytogenes].
ACCESSION   WP_258015384
VERSION     WP_258015384.1
KEYWORDS    RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Listeria monocytogenes"
                     /db_xref="taxon:1639"
     Protein         1..>233
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          12..>180
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mfsniinlpk niryrflisf fnrifsscyi pvlpiymsgy isssevslal alilclnilg
       61 nfiggvlgdn ynlkqliali rgietiifvs lavciwasin iwtiiilfsl vtftsslrvp
      121 lfdmlvfnav ssenqnyvfs lsywinnigf svgyllsafv fkgnmfsiic mgiivniisi
      181 painsleddy tsqsksnvka nlievikiyq nkkfiifsfg silllflelq plp
//
LOCUS       WP_258015465             285 aa            linear   BCT 02-MAR-2025
DEFINITION  SpaA isopeptide-forming pilin-related protein, partial [Listeria
            monocytogenes].
ACCESSION   WP_258015465
VERSION     WP_258015465.1
KEYWORDS    RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (residues 1 to 285)
  AUTHORS   Kang,H.J., Paterson,N.G., Gaspar,A.H., Ton-That,H. and Baker,E.N.
  TITLE     The Corynebacterium diphtheriae shaft pilin SpaA is built of tandem
            Ig-like modules with stabilizing isopeptide and disulfide bonds
  JOURNAL   Proc Natl Acad Sci U S A 106 (40), 16967-16971 (2009)
   PUBMED   19805181
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2009 Oct 27;106(43):18427]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037639.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17802.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Listeria monocytogenes"
                     /db_xref="taxon:1639"
     Protein         <1..285
                     /product="SpaA isopeptide-forming pilin-related protein"
     Region          <1..>145
                     /region_name="ClfA"
                     /note="Clumping factor A-related surface protein, MSCRAMM
                     (microbial surface components recognizing adhesive matrix
                     molecules) family, DEv-IgG fold [Cell
                     wall/membrane/envelope biogenesis]; COG4932"
                     /db_xref="CDD:443959"
     Region          143..203
                     /region_name="MucBP"
                     /note="MucBP domain; pfam06458"
                     /db_xref="CDD:461917"
     Region          244..285
                     /region_name="Gram_pos_anchor"
                     /note="LPXTG cell wall anchor motif; pfam00746"
                     /db_xref="CDD:366278"
ORIGIN      
        1 lapgdyklie tkaptgyqld aapvrftidf nqteaakvsk tntaktgtvv ltkkdsatna
       61 kladatfelr nedgtvvren lvtddngeis vadlapgdyk lietkaptgy qldaapvhft
      121 idfnqteaan vtktnkkkig tiivkfidve gnqlndeemh tgnvdeeynv kakeivgytl
      181 vkdsankkgm yketsqeitf vyekkampii veptepskpt eqltesatva epkpikqnfk
      241 ttnkstnnkr klpstgdefp ytmlfiglfv svagvfflkk pkqik
//
LOCUS       WP_258015469              48 aa            linear   BCT 02-MAR-2025
DEFINITION  Imm59 family immunity protein, partial [Listeria monocytogenes].
ACCESSION   WP_258015469
VERSION     WP_258015469.1
KEYWORDS    RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (residues 1 to 48)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026935.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15597.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..48
                     /organism="Listeria monocytogenes"
                     /db_xref="taxon:1639"
     Protein         <1..48
                     /product="Imm59 family immunity protein"
     Region          <1..47
                     /region_name="Imm59"
                     /note="Immunity protein 59; pfam15597"
                     /db_xref="CDD:434803"
ORIGIN      
        1 svvgkyefnn vfdamdkflh imqsrvlsnr rrvkdgelpe yscplwdn
//
LOCUS       WP_258015554             208 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase TerL endonuclease subunit, partial [Stenotrophomonas
            maltophilia].
ACCESSION   WP_258015554
VERSION     WP_258015554.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (residues 1 to 208)
  AUTHORS   Xu,R.G., Jenkins,H.T., Chechik,M., Blagova,E.V., Lopatina,A.,
            Klimuk,E., Minakhin,L., Severinov,K., Greive,S.J. and Antson,A.A.
  TITLE     Viral genome packaging terminase cleaves DNA using the canonical
            RuvC-like two-metal catalysis mechanism
  JOURNAL   Nucleic Acids Res 45 (6), 3580-3590 (2017)
   PUBMED   28100693
REFERENCE   2  (residues 1 to 208)
  AUTHORS   Hilbert,B.J., Hayes,J.A., Stone,N.P., Duffy,C.M., Sankaran,B. and
            Kelch,B.A.
  TITLE     Structure and mechanism of the ATPase that powers viral genome
            packaging
  JOURNAL   Proc Natl Acad Sci U S A 112 (29), E3792-E3799 (2015)
   PUBMED   26150523
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042863.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20441.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         <1..208
                     /product="terminase TerL endonuclease subunit"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
     Region          <2..192
                     /region_name="YmfN"
                     /note="Phage terminase-like protein, large subunit,
                     contains N-terminal HTH domain [Mobilome: prophages,
                     transposons]; COG4626"
                     /db_xref="CDD:443665"
ORIGIN      
        1 rfevsdfagc pcwvgvdlas kldvaavvll fekgdsyyvi prfyvpesav eenekyqqfl
       61 ldelivstpg nmtdyafiee elkelaaqgv dvrdiafdpa qaaylmtrle qeglptvema
      121 qsvrnlsepm kevealilsr rlwhdgnaam twmmgnvvar vdakehvypr kekmeskidg
      181 avalimamgr amqardtgtt qqgfvvid
//
LOCUS       WP_258015561            4192 aa            linear   BCT 02-MAR-2025
DEFINITION  hemagglutinin repeat-containing protein [Stenotrophomonas
            maltophilia].
ACCESSION   WP_258015561
VERSION     WP_258015561.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024728.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13332.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4192
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..4192
                     /product="hemagglutinin repeat-containing protein"
                     /calculated_mol_wt=426965
     Region          1..>21
                     /region_name="ESPR"
                     /note="Extended Signal Peptide of Type V secretion system;
                     pfam13018"
                     /db_xref="CDD:463773"
     Region          67..329
                     /region_name="TPS"
                     /note="TPS secretion domain; pfam05860"
                     /db_xref="CDD:461762"
     Region          84..1776
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          331..349
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          351..370
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          372..389
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          391..412
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          487..506
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          508..544
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          546..564
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          566..587
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          589..608
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          610..669
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          615..630
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          671..692
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          694..712
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          714..734
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          736..754
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          755..773
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          775..796
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          798..816
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          818..859
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          861..903
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          862..882
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          905..924
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          927..965
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          967..988
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          990..1008
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1010..1031
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1038..1052
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1054..1074
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1076..1113
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1115..1134
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1137..1155
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1157..1177
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1179..1197
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1199..1239
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1241..1259
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1261..1282
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1284..1302
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1304..1324
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1327..1345
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1347..1366
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1368..1386
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1388..1407
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1409..1428
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1430..1449
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1456..1474
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1476..1495
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1497..1515
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1517..1536
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1541..1556
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1562..1582
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1605..1622
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1625..1643
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1645..1663
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1664..1683
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1685..1701
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1704..1723
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1744..1760
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1772..1790
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1793..1823
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1825..1842
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2027..3503
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          2573..2708
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          2727..2882
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          2942..3108
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          3260..3425
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          3776..3827
                     /region_name="PT-VENN"
                     /note="Pre-toxin domain with VENN motif; pfam04829"
                     /db_xref="CDD:428147"
     Region          4085..4190
                     /region_name="CdiA-CT_Kp342-like"
                     /note="C-terminal (CT) domain of the contact-dependent
                     growth inhibition (CDI) system (CdiA-CT) of Klebsiella
                     pneumoniae 342 CdiA, and similar proteins; cd20724"
                     /db_xref="CDD:410971"
     Site            order(4089,4100,4102..4104,4106,4108..4109,4145..4147,
                     4149,4154..4156,4174,4176,4184,4186..4187)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:410971"
ORIGIN      
        1 mntiyrlvfn ralrvwqvas elvkgggglv ghvprrqsaa lsplgfalmc slgwvsmvtp
       61 alaqsdarii sdpnapgrer ptmvtapngv pmvnittpsa agvsrnrysq fdvgregvil
      121 nnargqmqtq lggwvqgnpw latgsarvil nevngpasrl ngyvevagqr aeviianpag
      181 iqvngggfln asrvtlttgt pmftgagale gyrvtggaiq idgegldtsr adytdlitrs
      241 lkvnasiwan qlqatlgnnv vnadhsqasl ipangeaptf aldvgalggm fankiwlvgn
      301 ehgvgvrnag sigaqagelv vtvdgrlent galqslqnvh lqargdlana gtiaatreva
      361 ittggtldns ggklnaqrlq veaqglrnhg gtieqtgvqa lalkaeaarn rsngllgald
      421 avasggnggg pgggtspgsg ggtpgtgapg tgtpgtgggs tgtptspvvp maegliaiag
      481 mldndggsia nggavslaar agldnsggrl gvsalqagge lrndggtlqv hgdaalhvgl
      541 lsnqkgalsv agglrldaqs ldnrggelrh agkaasswtv qglfnndggl latnaaqlal
      601 qagqvgnagg riehageggl tldtgdwagp ggrlstvgrl hwttgnadlr ngalsaagfd
      661 ivagmldnrg gsllslgtga ssvkasnldn gaggtlagng dlivtattld nskglvqqag
      721 tgslsvqadt lrgsegrlls ngalvlsgge ldvsggttsa qsvqiharal rnrqgqivsq
      781 gvselaldvr daldnqggki vgngglridt gridnqkgtl qsagthgval tvrdtldnsg
      841 ggisgngqvq lqvgslvnqg gkvlaagssa lqvqarvrld nsnggrlagt gdlrlqaasl
      901 dnrsgaieha gggtlqirad slqgaggril sqsalelegg dlllgagstt qaeriaidaq
      961 rldntggnls atgndalrlh vaqgvdnsgg tiagngaldv qagelinrtg tlsgagtads
     1021 tlqivgaldn hegtiasnan rltiaaarld nsggsirqag nqgldittgr ldgskgtlvs
     1081 satltlradd vdhrdatlga drfdleattl dnaggriias gegasrvkat algnaggtla
     1141 sngdltllar tldnsagriq hagsgqlqvs aqallgkggs vlsngsfvld gasldlsgat
     1201 tsarrvaisa dtlttaggtl tatgdnalrl rvqgmldnrg gslasngald viaqqlnnaq
     1261 gtlqgagtgh stlaigqald nqkgrillgg agtvtaaslg nqggtvhagg salvlgvdgr
     1321 ldngeqglls stgmvtldag sldnrhgtlv agkdltvtta agvdnsdgam qagerlqlqg
     1381 ngldnqrgtl lggqldietr gqrldnragt lgtqkgalsv hsgvldnqgg rvqsaadlti
     1441 ntagqdidnr ftagsgglla agklqleggv ldnrggavna qgdarlllar vdnsaggtla
     1501 saadlslraa slvnaggrvq agrnldltld ghvdnaagai aagqrltlta asvdnrntrg
     1561 gdgtrglqag qlqfgaqwld nsqgqvvidg sarlqingql qntggvistg gnldsqadnv
     1621 ansggllrad gsqslvaral sedgqvhaqr dlgltlqqgm rhrgewiang tlslnlsgdl
     1681 dnqgvvrggn ldlnaqnitn aasgeissqg tthlnargql tnrglidgal thleageidn
     1741 lgtgriygdh vaistgvlkn raeetggatr vgtvaarerl dlgvrelqnt gkgliysggd
     1801 aaiggalgad riasgiagri dnissvidvg snlsidaqvv nnirenvvis qtrsvmdpvr
     1861 ldrpawwrng kngtedirst shysahevyy ldpadiledt phitpdgfvv hravvrlssk
     1921 tsayffgrgg lyaglgerar lnvqdgtvvm yyvgrqdnqi npdqvrvgad dpfaelstlh
     1981 pdapafryvd dkltyssnyg tcttncvqlw tykdysdpdh tltnprgsgg nnvssneqyr
     2041 iatrtvtedv lgtgvgadav irsggamris tdtlknhygs iaaggnlsiv gltttakven
     2101 laqtlfrthe fnnvghtysn ervtwsneti seeigriggs itsggtlvid vgdlsnlnqg
     2161 rnapnvqngs amanlnvqgp kalpdgpghg saqgpgqstg tgaeralaqa adaagtqqgg
     2221 nvggvsgntg tsgprvvaas ggspdriamg apdtrapsas lfnvnpnggh ylvetdprft
     2281 dhktwlssdh llgqmgyspd tvqkrlgdgy yeqklvreqi gqltgrrfld gyasdeaqyr
     2341 alleagatva sewglrpgva lteaqmaqlt sdivwlveqt vtladgsttt alvpqvylrl
     2401 rpgdldgqga llaganvdik lgnglvntgn iagrklvtid agniehlggs isgqyvglss
     2461 dkdiriagat vtatdalsvk aagnvtvast vetqrgggty qyetnridrv aglyvtnpsg
     2521 dgmlsvvagg dislqaaqir nagadgltql aaggtldvga ialeerrdat fdernhqrss
     2581 rtthaassvq gagdvvlaag kdinlaaaqi kaagglalqa ggdinsqalv dsesrdfssa
     2641 gkrsslqvsq rdetvrgsll qagdnlllta grdvnltaal vdsndgavsv aagrdvnlls
     2701 anethdysld sydkkkktls sttttrsvdn sdsyaigtai qgerinitag rdltavgavv
     2761 datgnvilga gnnvlitaae dhhssesnes kkksgvtggf gngvasvgys saknsstrae
     2821 qsttqvgsai asrdgnvlin agntltieaa dvaagenltl vgkdiallar qdttdnqssq
     2881 askssgfsvg vtydptkayr sardsttdgm adsgsamgri trtaegaasg lraattstvv
     2941 tagsqrtnse qshstsdarv sqlaaggdlt lianggsils qgtqmsaegn avllatkdiv
     3001 fdvahnters dsssrgkgwg fanntsglpf gtnnsqsqgs gssdtitgtq lsvgggvrma
     3061 ttegnislta aniaaekdvn iraagdlrvr sgqdtvsnan tsdskaigtv qisdtekfsg
     3121 whreqhqdds aqvsqvassi gslggsvnlt aggkytqtas nvvaakdvni taaeiellta
     3181 desghysqsd kdlkigvfar vksplidlin nvdaarqsdd rlqkmqgmaa ganayqaasa
     3241 isalsgrggs gelfraeagi gfktanssad gssmvsrgst iqgggnvnlt stqgdihvvq
     3301 gnlsagntls ldsagdille agkahvadrs kssnagaevg vgvvvgaqtg vyvyaeasvg
     3361 sskansdsnt wqnttltgqn islkaegdtt lrgatatadr idvktggtlt ieslqdiaes
     3421 msrnsqvggr vqvafgnawn adgyasagka egnyqgvgqq sglfagnggy hvdaghvnlv
     3481 ggaiasthag nseltagslt ftdlqnhmdy tassgsisgg aggqmdgwap kpgtaaprgg
     3541 pglsmmekgs dssstlatlt egnftiggkq ttaaelgint dasaahrald alpdanklla
     3601 dqqamaagag tvmatsqqia wdvqayqskk atqayydgls sddqkafnal saeqrdtvlt
     3661 ansqayndak kwgdggeysr algavttalv ggvagqgagq vasnalapya ayfigsklds
     3721 nhgsdpnaal qllshavlga llaeanggsa gtgavsaagg elaakvltnt ltggnpsels
     3781 peqkemvlal sqavgalagg lsgqdlagia lnagiaknsv ennflgnddh armvhlreka
     3841 krqggldkqe slelvlldaa dqmsagllrk alagetltev qaadlatyin ryelqngpld
     3901 lpglqrqfla nsgsldpgel qginpsqsyg rpyvglgddq kaykdanysw fedliyrdkg
     3961 anerlydaal kqsgleitrs edllpsamql rnffavhdaq assaiasaaf iaatlggase
     4021 enrraltltm galanigavr fvnrtgllpq tgalgvpqgp gkgqqlgres qrtelvlpap
     4081 smvtvapakf dyifgrvrsn ehnsarstql fvemrrlgin dsafgrkili ehldkvvrte
     4141 gnvvssysne fgrfetresl ligpsgravm lrssfqvmdd gtrkfstfip sr
//
LOCUS       WP_258015704             291 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Stenotrophomonas
            maltophilia].
ACCESSION   WP_258015704
VERSION     WP_258015704.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025107.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13730.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..291
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=31389
ORIGIN      
        1 mvfdrypngg gemllalala dhahddgthi fpsiarlaek trqsersvqy qlrrmeqsgw
       61 lvlvnagigg rrsgfgeggr trqyrinpew mkgaeiapfg kgakqapegc kttqervqng
      121 vekgataiap epratksnqe qpshrecere adplaltveq verelagfgs tptgvdreql
      181 arfvrhraai rrplsvqgwl qvrqqlldli vaghdpnesl kqtmaaglsl pvipvaqpsa
      241 gathaspqhg sadrteqleq qfyaqrrgsg hgggagvepg dvvdaefavv g
//
LOCUS       WP_258015759             414 aa            linear   BCT 02-MAR-2025
DEFINITION  XVIPCD domain-containing protein [Stenotrophomonas maltophilia].
ACCESSION   WP_258015759
VERSION     WP_258015759.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (residues 1 to 414)
  AUTHORS   Oka,G.U., Souza,D.P., Cenens,W., Matsuyama,B.Y., Cardoso,M.V.C.,
            Oliveira,L.C., da Silva Lima,F., Cuccovia,I.M., Guzzo,C.R.,
            Salinas,R.K. and Farah,C.S.
  TITLE     Structural basis for effector recognition by an antibacterial type
            IV secretion system
  JOURNAL   Proc Natl Acad Sci U S A 119 (1) (2022)
   PUBMED   34983846
REFERENCE   2  (residues 1 to 414)
  AUTHORS   Souza,D.P., Oka,G.U., Alvarez-Martinez,C.E., Bisson-Filho,A.W.,
            Dunger,G., Hobeika,L., Cavalcante,N.S., Alegria,M.C., Barbosa,L.R.,
            Salinas,R.K., Guzzo,C.R. and Farah,C.S.
  TITLE     Bacterial killing via a type IV secretion system
  JOURNAL   Nat Commun 6, 6453 (2015)
   PUBMED   25743609
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 414)
  AUTHORS   Alegria,M.C., Souza,D.P., Andrade,M.O., Docena,C., Khater,L.,
            Ramos,C.H., da Silva,A.C. and Farah,C.S.
  TITLE     Identification of new protein-protein interactions involving the
            products of the chromosome- and plasmid-encoded type IV secretion
            loci of the phytopathogen Xanthomonas axonopodis pv. citri
  JOURNAL   J Bacteriol 187 (7), 2315-2325 (2005)
   PUBMED   15774874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042736.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20410.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..414
                     /product="XVIPCD domain-containing protein"
                     /calculated_mol_wt=44546
     Region          68..>138
                     /region_name="GluZincin"
                     /note="Gluzincin Peptidase family (thermolysin-like
                     proteinases, TLPs) which includes peptidases M1, M2, M3,
                     M4, M13, M32 and M36 (fungalysins); cl14813"
                     /db_xref="CDD:472708"
     Region          347..>392
                     /region_name="DUF6696"
                     /note="Domain of unknown function (DUF6696); pfam20410"
                     /db_xref="CDD:466559"
ORIGIN      
        1 mtilsaeter llgefagktd vtsdqvdnlr sviagshvla kqvdaaiaag ylerfellpa
       61 tsnaggtyet gtksinlpas slstpaapdr fdaaevtfvl gheiqhgfnd adverayvqf
      121 dadveqiagr ttshdyteai gtllaanrrd eacsniagwn alvsqvrasn pdatlrdlye
      181 astrstdviq srpgppitya phpeltlnad ltisptaani egmarhyydq gvstglghhg
      241 nsdyqnfyga laiglasefe aanpapdgvs rmevnmkklg lderlleqng lnlgegsppr
      301 qpyfdtstsp stlryfdhte gththvpitt qhavegdglp tllaegrdrs lheqirgkva
      361 eldaangrsf dasserlsas llvlarengl drgstmwcsa arprvrarrr tslw
//
LOCUS       WP_258015847             610 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramoyl-L-alanine amidase [Streptomyces sp. AJS327].
ACCESSION   WP_258015847
VERSION     WP_258015847.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. AJS327
  ORGANISM  Streptomyces sp. AJS327
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 610)
  AUTHORS   Cheng,X., Zhang,X., Pflugrath,J.W. and Studier,F.W.
  TITLE     The structure of bacteriophage T7 lysozyme, a zinc amidase and an
            inhibitor of T7 RNA polymerase
  JOURNAL   Proc Natl Acad Sci U S A 91 (9), 4034-4038 (1994)
   PUBMED   8171031
REFERENCE   2  (residues 1 to 610)
  AUTHORS   Wang,X., Wilkinson,B.J. and Jayaswal,R.K.
  TITLE     Sequence analysis of a Staphylococcus aureus gene encoding a
            peptidoglycan hydrolase activity
  JOURNAL   Gene 102 (1), 105-109 (1991)
   PUBMED   1677905
REFERENCE   3  (residues 1 to 610)
  AUTHORS   Potvin,C., Leclerc,D., Tremblay,G., Asselin,A. and Bellemare,G.
  TITLE     Cloning, sequencing and expression of a Bacillus bacteriolytic
            enzyme in Escherichia coli
  JOURNAL   Mol Gen Genet 214 (2), 241-248 (1988)
   PUBMED   3070348
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013661.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01510.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Streptomyces sp. AJS327"
                     /db_xref="taxon:2545265"
     Protein         1..610
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /EC_number="3.5.1.28"
                     /GO_function="GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=61809
     Region          <60..600
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          413..561
                     /region_name="PGRP"
                     /note="Animal peptidoglycan recognition proteins
                     homologous to Bacteriophage T3 lysozyme; smart00701"
                     /db_xref="CDD:128941"
     Site            order(445,480,579,585,587)
                     /site_type="active"
                     /note="amidase catalytic site [active]"
                     /db_xref="CDD:133475"
     Site            order(445,579,587)
                     /site_type="other"
                     /note="Zn binding residues [ion binding]"
                     /db_xref="CDD:133475"
     Site            order(446..447,476,480,494,505..506,511,579,583,585..587)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:133475"
ORIGIN      
        1 mramgvssvs lagaaaallp lfpllspgpp pdaaarphpv gspvplgrta ppgpapgdpa
       61 arepltgpgg ggpvdglggv gvgrgvgvgv gggarepaap agefaptggf agyrapgraa
      121 pphgpaatpr avspgavlps aasptaalpg strslpltvn apsptspadp paatggarew
      181 aageaaragt gaapegrrap aalglrrasv apfallglvw adrsaplrgr vlvrtrpagg
      241 grwsgwqrle prgadspdag aresrargat aplwvgpsdg vevrvlpaap gvepgagraq
      301 rtrqdgrsgq dgehvpgqdg rdgqhgrdgr aaapggrlal prglrlelvn pgsggttalg
      361 rgaperpvar gsrasgetpr vppafgraal avrapsaata lartgngpra prprivsrra
      421 wgadeglrrg arpaytrrvk vafvhhtatg nryrcrdtpa flralhryhv rsvkwrdvgy
      481 nflvnrcgav yegraggvak pvlgahtygf ntnstgiavi gsydrerppr aalasvarls
      541 awklgrsrvp argavrlvsa gsgkfgrges vrfravsghr dafdtvcpgg rlhgalagvr
      601 akaawlqrrr
//
LOCUS       WP_258015945             428 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Streptomyces sp. AJS327].
ACCESSION   WP_258015945
VERSION     WP_258015945.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. AJS327
  ORGANISM  Streptomyces sp. AJS327
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Streptomyces sp. AJS327"
                     /db_xref="taxon:2545265"
     Protein         1..428
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44631
     Region          10..372
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(18..19,22..23,26,59,109..110,112..114,117,137,
                     140..141,144,218,221..222,225..227,230,258,262,318..319,
                     323,327,343,346..347,350..351,354)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mnlppgmspv vllrstfsgv stglyltgsa vffteyigls prlvglgisi awlistatmm
       61 pfgmladrfg grriwligts asalvfclyp lahaywqfql iialellvsg lgsagsgryf
      121 gdlfpeghra rgraylrvts nigmavgaai agvaisldsr pgylaivlia agvtaldail
      181 iawavphvdr phqrvegear rkpvairdrs fvalavlngv fnlngpmlsv llplwilsrt
      241 dapswlvagt mlmnmalciv fqipasrgve spgngarawm wagvalvvss vgfaasgtth
      301 gvatlvalav glaaltagel ltsagtwair yglapesrrg eytavfglgg qlswiagpaa
      361 lsflvmsgga agwlvlagvf vaaavaarpl vvwaertdre dgefaaavpa arsarrrfgr
      421 argragge
//
LOCUS       WP_258016324             316 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-ACP desaturase [Streptomyces sp. AJS327].
ACCESSION   WP_258016324
VERSION     WP_258016324.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. AJS327
  ORGANISM  Streptomyces sp. AJS327
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 316)
  AUTHORS   Liu,Q., Chai,J., Moche,M., Guy,J., Lindqvist,Y. and Shanklin,J.
  TITLE     Half-of-the-Sites Reactivity of the Castor Delta9-18:0-Acyl Carrier
            Protein Desaturase
  JOURNAL   Plant Physiol 169 (1), 432-441 (2015)
   PUBMED   26224800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015370.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03405.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Streptomyces sp. AJS327"
                     /db_xref="taxon:2545265"
     Protein         1..316
                     /product="acyl-ACP desaturase"
                     /EC_number="1.14.19.2"
                     /GO_function="GO:0045300 - stearoyl-[ACP] desaturase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=35891
     Region          37..312
                     /region_name="Ferritin_like"
                     /note="Ferritin-like superfamily of diiron-containing
                     four-helix-bundle proteins; cl00264"
                     /db_xref="CDD:469698"
     Site            order(95,137,140,189,219,222)
                     /site_type="other"
                     /note="dinuclear metal binding motif [ion binding]"
                     /db_xref="CDD:153097"
ORIGIN      
        1 msgetrqpra pgtedgargg mgvpedaraa ttppgtaigp mlepfevees vtdfmratpv
       61 srrwdvesit swdqadagrl tdgqrsavrf vtliedhlpg yfamyhklfp vngdverety
      121 lhnrelyhft vrwaaeedth araltryqta sgltdpetlr aelavegqre ftlpyehavq
      181 yfaytlvqek atqiyyqqlr dvveepvlae vlgrlsrdea rhfafmadtv erylrkhgda
      241 vvepvrdvia tfrmplagtm rgywrwalki adtarydhtd ayehlirvvn ravdaksdrm
      301 deltrfissc rtvaav
//
LOCUS       WP_258016409            4109 aa            linear   BCT 02-MAR-2025
DEFINITION  hemagglutinin repeat-containing protein [Stenotrophomonas
            maltophilia].
ACCESSION   WP_258016409
VERSION     WP_258016409.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024728.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13332.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4109
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..4109
                     /product="hemagglutinin repeat-containing protein"
                     /calculated_mol_wt=416315
     Region          1..>21
                     /region_name="ESPR"
                     /note="Extended Signal Peptide of Type V secretion system;
                     pfam13018"
                     /db_xref="CDD:463773"
     Region          67..329
                     /region_name="TPS"
                     /note="TPS secretion domain; pfam05860"
                     /db_xref="CDD:461762"
     Region          84..1776
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          331..349
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          351..370
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          372..389
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          391..412
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          487..506
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          508..544
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          546..564
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          566..587
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          589..608
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          610..669
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          615..630
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          671..692
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          694..712
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          714..734
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          736..754
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          755..773
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          775..796
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          798..816
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          818..859
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          861..882
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          885..902
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          905..925
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          950..965
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          967..988
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          990..1008
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1010..1031
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1033..1052
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1054..1073
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1076..1113
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1115..1135
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1137..1155
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1157..1177
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1179..1197
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1199..1239
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1241..1259
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1261..1282
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1284..1302
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1304..1324
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1327..1345
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1347..1366
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1368..1386
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1388..1407
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1409..1428
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1430..1449
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1456..1474
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1476..1495
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1497..1515
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1517..1536
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1564..1582
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1584..1603
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1605..1622
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1625..1643
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1645..1663
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1664..1683
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1685..1701
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1704..1723
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1725..1740
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1743..1761
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1772..1791
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1793..1823
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2379..3891
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          2747..2882
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          2942..3101
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          3259..3424
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
ORIGIN      
        1 mntiyrlvfn ralrvwqvas elvkgggglv ghvprrqsaa lsplgfalmc slgwvsmvtp
       61 alaqsdarii sdpnapgrer ptmvtapngv pmvnittpsa agvsrnrysq fdvgregvil
      121 nnargqmqtq lggwvqgnpw latgsarvil nevngpasrl ngyvevagqr aeviianpag
      181 iqvngggfln asrvtlttgt pmftgagale gyrvtggaiq idgegldtsr adytdlitrs
      241 lkvnasiwan qlqatlgnnv vnadhsqasl ipangeaptf aldvgalggm fankiwlvgn
      301 ehgvgvrnag sigaqagelv vtvdgrlent galqslqnmr lqargdlana gtiaatreva
      361 ittggtldns ggklnaqrlq veaqglrnhd gtieqtgvqa lalkaeaarn rsngllgald
      421 avasggnggg pgggtspgsg ggtpgtgapg tgtpgtgggs tgtptspvvp maegliaiag
      481 mldndggsia nggavslaar agldnsggrl gvsalqagge lrndggtlqv hgdaalhvgl
      541 lsnqegalsv agglrldaqs ldnrggelrh agkaasswtv qglfnndggl latnaaqlal
      601 qagqvgnagg riehageggl tldtgdwagp ggrlstvgrl hwttgnadlr ngalsaagfd
      661 ivagvldnrg gsllslgtga ssvkasnldn gaggtlagng dlivtattld nskglvqqag
      721 tgslsvqadt lrgsegrlls ngalvlsgge ldvsggttsa qsvqiharal rnrqgqivsq
      781 gvselaldvr daldnqggqi vgngglrida gridnqkgtl qsagtqgval tvrdtldnsg
      841 ggisgngqvq lqvgslvnqg gkvlaagsga lqvqarerld nsnggrlagt gdlrlqaasl
      901 dnrsgaieha gggtlqirad slqgaggril sqsalelegg dlllgagstt qaeriaidaq
      961 rldntggnls atgsdalrlh vaqgvdnsgg tiagngaldv qagelinrtg tlsgagtads
     1021 tlqivsaldn hegtiasnan rltiaaarld nsggsirqag nqgldittgr ldgskgtlvs
     1081 satltlradd mdhrdatlga drldleattl dnaggriias gegasrikat algnaggtla
     1141 sngdltllar tldnsagriq hagsgqlqvs aqallgkggs vlsngsfvld gasldlsgat
     1201 tsarrvaisa gtlttaggtl tatgedalrl rvqgmldnrg gslasngald viaqqlnnaq
     1261 gtlqgagagh stlaigqald nqkgrillgg agtvtaaslg nqggtvhagg salvlgvdgr
     1321 ldngeqglls stgmvtldag sldnrhgtlv agkdltvtta agvdnsdgam qaaerlqlqg
     1381 ngldnqrgtl lggqldidtr gqrldnragt lgtqkgalsv rsgvldnqgg rvqsaadlti
     1441 ntagqdidnr ftagsgglla agklqleggv ldnrggavna qgdarlllar vdnsaggtla
     1501 saadlslraa slanaggrvq agrnldltld ghldnaagai aagqrltlta asvdnrntrg
     1561 gdgthglqag qlqfgaqwld nsqgqvvtdg sarlqingql qntggvistg gnldsqadnv
     1621 anssgllrad gsqtlvarvl sedgqvhaqr dlgltlqqgm rhrgewiang tlslnlsgdl
     1681 dnqgvvrggn ldlnaqnitn aasgeissqg tthlnargql tnrglidgal thleageidn
     1741 lgtgriygdh vaistgvlkn raeeaggatr vgtvaarerl dlgvrelqnt gkgliysggd
     1801 aaiggalgad riasgiagri dnissvidvg gnlsidaqvv nnirenvvis qtrsvmdpvr
     1861 ldrpawwrng kngtedirst shysahevyy ldpadiledt phitpdgfvv hravvrlssk
     1921 tsayffgrgg lyaglgerar lnvqdgtvvm yyvgrqdnqv npdqvrvgad dpfaelsglh
     1981 pnapafryvd dkltyssnyg tcttncvqlw tykdysdpdh tltnprgsgg sdvssneqyr
     2041 iatrtvtedv lgagvgadav irsggamrig tdnlknhygs iaaggnlsiv gltatakven
     2101 laqtlfrthe fnnvghtysn ervtwsneti seeigriggs itsggtlvid vgdlsnlnqg
     2161 rnapnvqngs amanlnvqgp kalpdgpgqg gaqgpgqstg tgaeralaqa adaagtqqgg
     2221 svggvtgnsa tsgprvvaas ggspdriamr apdtrapsas lfnvnpnggh ylvetdprft
     2281 dhktwlssdh llgqmgyspd tvqkrlgdgy yeqklvreqi gqltgrrfld gyasdeaqyr
     2341 alleagatva sewglrpgva lteaqmaqlt sdivwlveqt vtladgsttt alvpqvylrl
     2401 rpgdldgqga llaganvdik lgnglvntgn iagrklvtid agniehlggg isgqyvglss
     2461 dkdiritgat vtatdalsvk aagnvtvast vetqrgggty qyetnridrv aglyvtnpng
     2521 dgalsvaagg dislkaaqih nagkegitql vaggnielga laldqrqdat fddrnhqhgs
     2581 qtthavssvq gggdvvlsag kaitlaaaql aaaggmalra egdinslavv dgksfdsava
     2641 gkrssrqvtq sdevvrgsql qangslllaa drdvnltaak vasadgtlsv aagrdvnlls
     2701 aneahhftld tydkkkktls sttttthaes dgsyaigtgl qgerisvsag rdltavgavv
     2761 datgnvslaa gnnvliaaae dhlsresses rkksgvtggf sngtasvgys ssrsnsaqae
     2821 qsttqvgsai asregsvvis agnqltiaas dvaasrdlal vgkdinllar qdtvdsqvsq
     2881 ssksrgfsvg vtydpakayr sardkategm adsgtmmgri trtgegmaag vaaavmpavt
     2941 agsqrsnsnq thsssdarvt qlsaggnlsl ianggsitsq gaqmsaegda vllatrdiaf
     3001 dvahntersd rdsrgkgwgl atnssglpvg tnnarsegmg qsdtitgtql svggsvrmat
     3061 tegdisltaa niaaqkdvti rsagdltirs gqdtvtnanh sdsraigtvq isdtekfsgw
     3121 hrekhsddrg qvaqvssnvg slggnvniia dgkytqtasn vvaakdvnis aaeielltad
     3181 esghysqsnd dlkigafarv ksplidlinn vdaarksdgr lqamqsmaag gnayqaasai
     3241 samsgnaggg sllsaeagvg fktasssadg ssqvsrgsti qgggsvnlts tqgdihvvqg
     3301 nlsaggtlsl dsagdirlea gkahvtdrsk ssnagaevgv gvsvgaqtgv yvyaeasvgs
     3361 sksnsdsstw qnttltgkni smkaegdtil rgatatadri dvqtggmltv eslqdmaesm
     3421 srnsqvggrv qvsfgtawnv sgnasagkad ghyqgvgqqs glfagnggyh vdagkvnlvg
     3481 gaitstnaan selsaqsltf tdlqnemayk assgsisggf gstgkaqtda ngnklpppsg
     3541 gqqlkdignt lssgdfgkln tanfsggvpm hergsdssst ratltegnit iggkkttase
     3601 lglntdataa heaiaalpnt aklladqqal aaaagtvist gqqirgdina sidqakrrrd
     3661 nataamndpe tsleqklala iatdranaei erlqkagvlv taiagglaas sgstgeilag
     3721 tlapavsyqi gqyfkqnpar nvadngdrgg egsathllah avlgaaiasa ggdsalvgai
     3781 aaagaeaaap avsrllfgkd sknltsaeqd tvsaivsasg avmgsfqdgl mtagvgsgaa
     3841 knaadnnwge vghystmatv lylagfseqd akavalaaws pdtdfrnait vknyvkglgs
     3901 kgdqidhhgl dgnkspeevv kmqqdlgekv tqiliqlken qdnptakadi lsnaenqril
     3961 hlfgdsfahv qedgthyngg nghlkhgtrp depdkhpday rnfvsallga astangsagg
     4021 lgnlntltds viastsektq kealaaaaga vggndrglvd spvagcevyq kcgpnkanav
     4081 irdiyqvapv eapnvdfskl nmpvewsrr
//
LOCUS       WP_258016677             286 aa            linear   BCT 02-MAR-2025
DEFINITION  TIR domain-containing protein [Stenotrophomonas maltophilia].
ACCESSION   WP_258016677
VERSION     WP_258016677.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (residues 1 to 286)
  AUTHORS   Tal,N., Morehouse,B.R., Millman,A., Stokar-Avihail,A., Avraham,C.,
            Fedorenko,T., Yirmiya,E., Herbst,E., Brandis,A., Mehlman,T.,
            Oppenheimer-Shaanan,Y., Keszei,A.F.A., Shao,S., Amitai,G.,
            Kranzusch,P.J. and Sorek,R.
  TITLE     Cyclic CMP and cyclic UMP mediate bacterial immunity against phages
  JOURNAL   Cell 184 (23), 5728-5739 (2021)
   PUBMED   34644530
REFERENCE   2  (residues 1 to 286)
  AUTHORS   Morehouse,B.R., Govande,A.A., Millman,A., Keszei,A.F.A., Lowey,B.,
            Ofir,G., Shao,S., Sorek,R. and Kranzusch,P.J.
  TITLE     STING cyclic dinucleotide sensing originated in bacteria
  JOURNAL   Nature 586 (7829), 429-433 (2020)
   PUBMED   32877915
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021640.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10137.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..286
                     /product="TIR domain-containing protein"
                     /GO_function="GO:0050135 - NADP+ nucleosidase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=31586
     Region          22..>131
                     /region_name="Crp"
                     /note="cAMP-binding domain of CRP or a regulatory subunit
                     of cAMP-dependent protein kinases [Signal transduction
                     mechanisms]; COG0664"
                     /db_xref="CDD:440428"
     Region          137..279
                     /region_name="COG4271"
                     /note="Predicted nucleotide-binding protein containing TIR
                     -like domain [General function prediction only]"
                     /db_xref="CDD:443412"
ORIGIN      
        1 maefrllagl daaaaqlaqa gelldvgtgq afitqgapet dvffivsgsv dvlvngkvvn
       61 trragdhvge maaiepaqlr aatvtarept vvlkvpeidf sriadshpvi wrrlaatlsr
      121 rlkernhmit qprgqvrvfv mssvealpvt rllvqhfehd pfltvvwdhg vfraanytld
      181 elerqleqad faiavahadd mvisrgdewp vmrdnvvfel gmfigflgrr raflmepred
      241 klklpsdltg lttvpyrytp gpdaraliap aceqirsril eagprd
//
LOCUS       WP_258016876             472 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma 54-interacting transcriptional regulator [Nocardioides
            marinisabuli].
ACCESSION   WP_258016876
VERSION     WP_258016876.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides marinisabuli
  ORGANISM  Nocardioides marinisabuli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 472)
  AUTHORS   Studholme,D.J. and Dixon,R.
  TITLE     Domain architectures of sigma54-dependent transcriptional
            activators
  JOURNAL   J Bacteriol 185 (6), 1757-1767 (2003)
   PUBMED   12618438
REFERENCE   2  (residues 1 to 472)
  AUTHORS   Chaney,M., Grande,R., Wigneshweraraj,S.R., Cannon,W., Casaz,P.,
            Gallegos,M.T., Schumacher,J., Jones,S., Elderkin,S., Dago,A.E.,
            Morett,E. and Buck,M.
  TITLE     Binding of transcriptional activators to sigma 54 in the presence
            of the transition state analog ADP-aluminum fluoride: insights into
            activator mechanochemical action
  JOURNAL   Genes Dev 15 (17), 2282-2294 (2001)
   PUBMED   11544185
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00158.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Nocardioides marinisabuli"
                     /db_xref="taxon:419476"
     Protein         1..472
                     /product="sigma 54-interacting transcriptional regulator"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008134 - transcription factor binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=51436
     Region          62..>299
                     /region_name="ChlI"
                     /note="Mg-chelatase subunit ChlI [Coenzyme transport and
                     metabolism]; COG1239"
                     /db_xref="CDD:440852"
ORIGIN      
        1 mtaetvpata qptivtlgel rasghqhkpl rtelrdnlla hlregrdpwp glhgfedtvv
       61 pqleraliag hdvvllgerg qgktrllrtm vglldewtpv iagsdlgehp yepitvasrr
      121 ralelgddlp vewrareery aeklatpdts vadligdvdp mkvaegrslg dpetihygli
      181 prshrgivai nelpdlaeri qvsmlnvmee rdiqirgyvl rlpldvlvva sanpedytnr
      241 griitplkdr fgaeirthyp telhdevavi rqeaaidptl vdvpdhlvei larftrhlrg
      301 stsvdqrsgv sarfaiagae tiaaaalhra taqgedaava rvvdletavd vlggkiefes
      361 geegreaevl thllrtavae tvrehfrgld mgllvdalea gkmvttgeqv tardllaglp
      421 vlgeselydd icdrldadtd grragaiela leglflarrv skasgrgesv yg
//
LOCUS       WP_258016910             401 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Nocardioides marinisabuli].
ACCESSION   WP_258016910
VERSION     WP_258016910.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides marinisabuli
  ORGANISM  Nocardioides marinisabuli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Nocardioides marinisabuli"
                     /db_xref="taxon:419476"
     Protein         1..401
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=41071
     Region          10..362
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(20..21,24..25,28,60,110..111,113..115,118,137,
                     140..141,144,214,217..218,221..223,226,253,257,306..307,
                     310,314,331,334..335,338..339,342)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340897"
ORIGIN      
        1 msrrggwlfl vglvllsfnl rpaavsvgpv laevrdglsl sapeaslltt lpvlafavfg
       61 alapgaaarg glhrvtlval vavvvglagr avtgsglvfl alsllavagm amanvlmpsl
      121 vkrhaperig avtavystal aigltsalll tvplsealgg wrgglgawav laglallpwl
      181 llarhdrvap tpggpitvaq vartrlglam aaffgvqslh ayvmfgwfaq lwrdagyspa
      241 aagalvglla gvsiplswll ppllarshhq rrvllpvisc yplayvgllv apgagavlwa
      301 vlagigactf pliltliglr artaegtaal saftqsagyl laaagpfvvg llydatgewt
      361 ipltlllvlv vpmlglatwl sgprlledel eqhaarrsap a
//
LOCUS       WP_258016956             265 aa            linear   BCT 02-MAR-2025
DEFINITION  HipA family kinase [Nocardioides marinisabuli].
ACCESSION   WP_258016956
VERSION     WP_258016956.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides marinisabuli
  ORGANISM  Nocardioides marinisabuli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042851.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20613.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Nocardioides marinisabuli"
                     /db_xref="taxon:419476"
     Protein         1..265
                     /product="HipA family kinase"
                     /calculated_mol_wt=28690
ORIGIN      
        1 msglsrvavs ryvtplregg slpgiveaed lgtyvckfrg agqglrvlva evvvaelarr
       61 vglrtprlvv ldldeelary eadeevqdll rasvganlgv dflpgsfgfd gtlpsgsgpd
      121 eaarvlwlda ftanvdrswr npnllvwhdd lwvidhgasl yfhhgwpggs leragaaerf
      181 aqqpwnvddh vlhehldrla avdeavrael gaddlpevla qvpdewlepv pgartpaevr
      241 aayvelltar latrawlpta vggar
//
LOCUS       WP_258016962             125 aa            linear   BCT 02-MAR-2025
DEFINITION  nitronate monooxygenase [Nocardioides marinisabuli].
ACCESSION   WP_258016962
VERSION     WP_258016962.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides marinisabuli
  ORGANISM  Nocardioides marinisabuli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 125)
  AUTHORS   Gadda,G. and Francis,K.
  TITLE     Nitronate monooxygenase, a model for anionic flavin semiquinone
            intermediates in oxidative catalysis
  JOURNAL   Arch Biochem Biophys 493 (1), 53-61 (2010)
   PUBMED   19577534
REFERENCE   2  (residues 1 to 125)
  AUTHORS   Francis,K. and Gadda,G.
  TITLE     Kinetic evidence for an anion binding pocket in the active site of
            nitronate monooxygenase
  JOURNAL   Bioorg Chem 37 (5), 167-172 (2009)
   PUBMED   19683782
REFERENCE   3  (residues 1 to 125)
  AUTHORS   Ha,J.Y., Min,J.Y., Lee,S.K., Kim,H.S., Kim,D.J., Kim,K.H.,
            Lee,H.H., Kim,H.K., Yoon,H.J. and Suh,S.W.
  TITLE     Crystal structure of 2-nitropropane dioxygenase complexed with FMN
            and substrate. Identification of the catalytic base
  JOURNAL   J Biol Chem 281 (27), 18660-18667 (2006)
   PUBMED   16682407
REFERENCE   4  (residues 1 to 125)
  AUTHORS   Francis,K., Russell,B. and Gadda,G.
  TITLE     Involvement of a flavosemiquinone in the enzymatic oxidation of
            nitroalkanes catalyzed by 2-nitropropane dioxygenase
  JOURNAL   J Biol Chem 280 (7), 5195-5204 (2005)
   PUBMED   15582992
REFERENCE   5  (residues 1 to 125)
  AUTHORS   Gorlatova,N., Tchorzewski,M., Kurihara,T., Soda,K. and Esaki,N.
  TITLE     Purification, characterization, and mechanism of a flavin
            mononucleotide-dependent 2-nitropropane dioxygenase from Neurospora
            crassa
  JOURNAL   Appl Environ Microbiol 64 (3), 1029-1033 (1998)
   PUBMED   9501443
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015047.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03060.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Nocardioides marinisabuli"
                     /db_xref="taxon:419476"
     Protein         1..125
                     /product="nitronate monooxygenase"
                     /GO_function="GO:0018580 - nitronate monooxygenase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=12029
     Region          <2..114
                     /region_name="TIM-like beta/alpha barrel domains"
                     /note="A large family of domains similar to triose
                     phosphate isomerase (TIM) which, in general, share an
                     eight beta/alpha closed barrel structure; cl21457"
                     /db_xref="CDD:473867"
     Site            order(75..76,97..98)
                     /site_type="other"
                     /note="phosphate binding site [ion binding]"
                     /db_xref="CDD:240073"
ORIGIN      
        1 mpvlaklrpd avrvveaara avdagaealv vgqalpgamp dgrdaglsgp avgplalrcl
       61 tevlaaldvp vvagggittv advrarlaag avavqvgaal lhdpttaarl vaalspdats
      121 eetps
//
LOCUS       WP_258016975             212 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: response regulator [Nocardioides].
ACCESSION   WP_258016975
VERSION     WP_258016975.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides
  ORGANISM  Nocardioides
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae.
REFERENCE   1  (residues 1 to 212)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Nocardioides"
                     /db_xref="taxon:1839"
     Protein         1..212
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=22349
     Region          9..207
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 msapggpvpi rvvlvddhav iraglaqlla stqdisvvgq agdgdgavev vrevrpdvvl
       61 mdlqmpgvdg vtatrrvcse mpgvdvlvlt sfsdaeriid aldagavgyl lkdadpddvl
      121 sgiravarge spihpkaara llgarsatsr pqltarevev lrlvrdglan kqiarrleis
      181 ertvkahlts afsrigvvdr tqaavwaqrq el
//
LOCUS       WP_258016989             165 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3169 family protein [Staphylococcus haemolyticus].
ACCESSION   WP_258016989
VERSION     WP_258016989.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus haemolyticus
  ORGANISM  Staphylococcus haemolyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022811.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11368.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Staphylococcus haemolyticus"
                     /db_xref="taxon:1283"
     Protein         1..165
                     /product="DUF3169 family protein"
                     /calculated_mol_wt=18437
ORIGIN      
        1 mkvkrylill vlggiiggfv gssmgsisnf lsnvnfahth fgliiciias liiigltfyl
       61 wkvqkdalkf knqslnsied ndadlfemks nlnfnkssii iyiqliisfv alllivfghg
      121 snsdvlyaii pymltiipsi mlgffnrrfd srypkigeki ilkkp
//
LOCUS       WP_258017078             773 aa            linear   BCT 02-MAR-2025
DEFINITION  transketolase-like TK C-terminal-containing protein [Nocardioides
            marinisabuli].
ACCESSION   WP_258017078
VERSION     WP_258017078.1
KEYWORDS    RefSeq.
SOURCE      Nocardioides marinisabuli
  ORGANISM  Nocardioides marinisabuli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (residues 1 to 773)
  AUTHORS   Veitch,N.J., Maugeri,D.A., Cazzulo,J.J., Lindqvist,Y. and
            Barrett,M.P.
  TITLE     Transketolase from Leishmania mexicana has a dual subcellular
            localization
  JOURNAL   Biochem J 382 (Pt 2), 759-767 (2004)
   PUBMED   15149284
REFERENCE   2  (residues 1 to 773)
  AUTHORS   Gerhardt,S., Echt,S., Busch,M., Freigang,J., Auerbach,G., Bader,G.,
            Martin,W.F., Bacher,A., Huber,R. and Fischer,M.
  TITLE     Structure and properties of an engineered transketolase from maize
  JOURNAL   Plant Physiol 132 (4), 1941-1949 (2003)
   PUBMED   12913150
REFERENCE   3  (residues 1 to 773)
  AUTHORS   Arjunan,P., Nemeria,N., Brunskill,A., Chandrasekhar,K., Sax,M.,
            Yan,Y., Jordan,F., Guest,J.R. and Furey,W.
  TITLE     Structure of the pyruvate dehydrogenase multienzyme complex E1
            component from Escherichia coli at 1.85 A resolution
  JOURNAL   Biochemistry 41 (16), 5213-5221 (2002)
   PUBMED   11955070
REFERENCE   4  (residues 1 to 773)
  AUTHORS   Fiedler,E., Thorell,S., Sandalova,T., Golbik,R., Konig,S. and
            Schneider,G.
  TITLE     Snapshot of a key intermediate in enzymatic thiamin catalysis:
            crystal structure of the alpha-carbanion of
            (alpha,beta-dihydroxyethyl)-thiamin diphosphate in the active site
            of transketolase from Saccharomyces cerevisiae
  JOURNAL   Proc Natl Acad Sci U S A 99 (2), 591-595 (2002)
   PUBMED   11773632
REFERENCE   5  (residues 1 to 773)
  AUTHORS   Wikner,C., Nilsson,U., Meshalkina,L., Udekwu,C., Lindqvist,Y. and
            Schneider,G.
  TITLE     Identification of catalytically important residues in yeast
            transketolase
  JOURNAL   Biochemistry 36 (50), 15643-15649 (1997)
   PUBMED   9398292
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046326.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22613.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..773
                     /organism="Nocardioides marinisabuli"
                     /db_xref="taxon:419476"
     Protein         1..773
                     /product="transketolase-like TK C-terminal-containing
                     protein"
                     /calculated_mol_wt=82536
     Region          10..379
                     /region_name="TPP_enzymes"
                     /note="Thiamine pyrophosphate (TPP) enzyme family,
                     TPP-binding module; found in many key metabolic enzymes
                     which use TPP (also known as thiamine diphosphate) as a
                     cofactor. These enzymes include, among others, the E1
                     components of the pyruvate, the acetoin and...; cl01629"
                     /db_xref="CDD:470272"
     Region          31..769
                     /region_name="PRK13012"
                     /note="2-oxoacid dehydrogenase subunit E1; Provisional"
                     /db_xref="CDD:237267"
     Site            order(121,156..159,187,189)
                     /site_type="other"
                     /note="TPP-binding site [chemical binding]"
                     /db_xref="CDD:238318"
ORIGIN      
        1 mttpdpallr evsrrvlwla tsivdaanag rpndsgvkvg ghqassasmv dimvalwfae
       61 lerddrvsvk phaspvlhal nyllgdldea ylptlrakgg lqsypsrlkd pdtvdfstgs
      121 vgigataalw aamshryvas rfadappagr fvsllgdael degaiweava dpavarlgev
      181 lwvvdvnrqs ldrvvpelqi arlagmfeaa gwqvvtikwg rriselferp ggaelrtrle
      241 qmpneeyqrm lragtdeiag rlladseaws psaalrelvd aldaddlael vrdlgghdlg
      301 llvdtfadvd dqrptvvfay tikgrglpte ghpnnhsall tadqmdalae rtggdrsapw
      361 srfeagsaaa dlceqraaal rrtpqppttp lpvpvalgha hkrpvstqaa lgrlladlhr
      421 dapavaarvv tcspdvasst nlggwinkag vwsvedrrdw faddterllr wsehqdgqhi
      481 elgiaevnlv sllgelgatw srwgerlipi atiydpfvsr alepwsygiy sggqsilvgt
      541 psgvtlapeg gahqsittps igleqpgcta wepafaqdle wcflaamdsv gvpggtssyf
      601 rlstrpldpt laelpddpal verrrrqava ggyrlpaeha pteeqvtlvg vgaimpevva
      661 aaeslrgqgv ragvvcltsp dlvfrsfqqr grrgggtggd vlaellpasa paplvtvldg
      721 hphtlsflag argdrirclg veefgqssgl adayrlhgld vaaivdaalg lve
//
LOCUS       WP_258017171            2022 aa            linear   BCT 02-MAR-2025
DEFINITION  CshA/CshB family fibrillar adhesin-related protein
            [Stenotrophomonas maltophilia].
ACCESSION   WP_258017171
VERSION     WP_258017171.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (residues 1 to 2022)
  AUTHORS   Back,C.R., Sztukowska,M.N., Till,M., Lamont,R.J., Jenkinson,H.F.,
            Nobbs,A.H. and Race,P.R.
  TITLE     The Streptococcus gordonii Adhesin CshA Protein Binds Host
            Fibronectin via a Catch-Clamp Mechanism
  JOURNAL   J Biol Chem 292 (5), 1538-1549 (2017)
   PUBMED   27920201
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037482.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18651.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2022
                     /organism="Stenotrophomonas maltophilia"
                     /db_xref="taxon:40324"
     Protein         1..2022
                     /product="CshA/CshB family fibrillar adhesin-related
                     protein"
                     /calculated_mol_wt=206692
     Region          31..302
                     /region_name="CshA_NR2"
                     /note="Surface adhesin CshA non-repetitive domain 2;
                     pfam18651"
                     /db_xref="CDD:436648"
     Region          84..>1305
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          355..429
                     /region_name="GEVED"
                     /note="GEVED domain; pfam20009"
                     /db_xref="CDD:466256"
     Region          596..686
                     /region_name="RrgB_K2N_iso_D2"
                     /note="fimbrial isopeptide formation D2 domain; TIGR04226"
                     /db_xref="CDD:275067"
     Region          1445..1566
                     /region_name="DUF11"
                     /note="Domain of unknown function DUF11; pfam01345"
                     /db_xref="CDD:460168"
     Region          1780..1992
                     /region_name="OmpA"
                     /note="Outer membrane protein OmpA and related
                     peptidoglycan-associated (lipo)proteins [Cell
                     wall/membrane/envelope biogenesis]; COG2885"
                     /db_xref="CDD:442131"
     Region          1926..>2004
                     /region_name="OmpA_C-like"
                     /note="Peptidoglycan binding domains similar to the
                     C-terminal domain of outer-membrane protein OmpA; cd07185"
                     /db_xref="CDD:143586"
     Site            order(1931..1932,1965..1966,1969,1973..1974,1977)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:143586"
ORIGIN      
        1 mllflmgaps lawaaayatg gsspyrntvl wltwgggang vnnvvlndga tssidlpias
       61 ginlrvdcrl ntaetnvlrs yrpgnfggds lddlyniggt gssnqliagi araggtssfs
      121 itctstvgga pyrlrgvvma daesinnsge fveasaqgtw nvvevrknla nstpylvnks
      181 tsganqvirf gpgnddntaa vtflsfdnaa hapgnlgvnm gfsmrgsgtt aiaigllvpy
      241 adfgdapasy gdamhvvddl qfrsdgipqg ssnfnintaa ytpgglappl tdflgslgpd
      301 teqrssysld algddnspva gsreedawpt syrltvmqag tqinqavacv gsgsvagwid
      361 fnrngsfdan erstiaacsg gqaslswsvp ntvsagtsyv rlryatnaaq iqnptgvadd
      421 gevedhriti tapslkvvks nnatggiwny gqagtqytlt vsntsdvptg nppnvpagvi
      481 tvrdqlpagi vanwagvhvs gnwsctasgq dvtctsnqvl aaaggagsts aftlpvtvta
      541 aatgvltnha svggghdpfn ngtpptpgss ctdadhctrs dvtvpvtrvs yakrsntagp
      601 vavgatvsyt vdvtvadgnt rdvltltdtl gtgldfgsvs nagsftcnaa nplvctlpag
      661 tvpgtyslsy tatvnaqasg qvvntvvgtg tdaptcssnc ttttpvaapk isvskasstt
      721 gpvavgdsva ytvtvlvada rttavttltd tlgtgldfgs ltnaggfscv pgnplvctlp
      781 agtvpgsyaf sytgivnaqa sgqvrnavvp sgtdnpscvg scdtstpmas pqvvyakqas
      841 tggpvrvgdr idytlsvtvt rarttgvitl tdtlgngldf vgvssaeaft cnaanplvct
      901 lpagtvpgty sltygatvna qasgsvrnav lgsgtdtpsc svncdtttpv atpgvsyaks
      961 vnstgpvsvg drlsytlttv vtnsrttavv tltdtlgtgl dfgavasaga yscnaanplv
     1021 ctlpagtvpg syslsytavv naqasgqvtn avlgsggdnp lctancdttt pvagseidyr
     1081 ktsaaagavk vgdsiaytlt avvsrsrtts vftltdtmgp gldfgavtas qgfscnasnp
     1141 lvctlpagta pgtytvdyta kvnaqakgsv snavlgsgtg tntctsncgt ttpvlsavvt
     1201 yrkqsstvap vdigdavdys vevtvansqt ldvvtltdtl grgldlqsvt qpgpftcnss
     1261 nplvctlpag tapgtytlgy rarvnaqaag svrnavlgsg gdtptcsgdc ttehaladpr
     1321 vvlekqsgpa sgtdvrpgdr lrytlvatve raalrqplql vdtpdaglsi eslpagcaqq
     1381 gadivctvps gtpvgrheyv yqaivnqear tqvlnrlrgq ypdgspppec ttcethhkvi
     1441 sdfslritkt asprrvkvgd lvryqlvven vggshwrdgv vvdtpppgfs yvdgsmrvad
     1501 ddgafalass qaplrigavd iavgrsatit yllrvgagvr sgthvnqava taddgsplsn
     1561 vataevamda dplledslvf gtvfddrdgd gwqdsaeltg vrvqggfaas ayvagsttld
     1621 rgngpqplad asapllhgvq igvvhgrast sdtveahqvv lrqrlrelsf sddfvlesaq
     1681 ghrvrmdaqg ttsvqlsgda gkgltaaapt vrreiarvad gyevayvign egiqeqgipg
     1741 vrlatvegll vetdpfgryh ladvhggdar lgrnfiikld patlpggael ttenpllrrv
     1801 tqgvptrfsf gvrlppspqa gaermeialg evlfapgsse lqssyrsvla kmaevvdryq
     1861 ggdvviaang esqalafara avvrdalqte vaesaraglt vqlrtdvqdp hsllagvdaa
     1921 gallgnvlfd tdkavvreef kpllaaiaar lekmgggqvs lvghtdvrgg haynqalglr
     1981 rasavfealr sqlspavqqr lrvrneesaa traaarqqea rr
//
LOCUS       WP_258017267             330 aa            linear   BCT 02-MAR-2025
DEFINITION  type VI secretion system baseplate subunit TssG [Klebsiella
            pneumoniae].
ACCESSION   WP_258017267
VERSION     WP_258017267.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 330)
  AUTHORS   Brunet,Y.R., Zoued,A., Boyer,F., Douzi,B. and Cascales,E.
  TITLE     The Type VI Secretion TssEFGK-VgrG Phage-Like Baseplate Is
            Recruited to the TssJLM Membrane Complex via Multiple Contacts and
            Serves As Assembly Platform for Tail Tube/Sheath Polymerization
  JOURNAL   PLoS Genet 11 (10), e1005545 (2015)
   PUBMED   26460929
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 330)
  AUTHORS   Filloux,A.
  TITLE     The rise of the Type VI secretion system
  JOURNAL   F1000Prime Rep 5, 52 (2013)
   PUBMED   24381728
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 330)
  AUTHORS   Zhou,Y., Tao,J., Yu,H., Ni,J., Zeng,L., Teng,Q., Kim,K.S.,
            Zhao,G.P., Guo,X. and Yao,Y.
  TITLE     Hcp family proteins secreted via the type VI secretion system
            coordinately regulate Escherichia coli K1 interaction with human
            brain microvascular endothelial cells
  JOURNAL   Infect Immun 80 (3), 1243-1251 (2012)
   PUBMED   22184413
REFERENCE   4  (residues 1 to 330)
  AUTHORS   Bingle,L.E., Bailey,C.M. and Pallen,M.J.
  TITLE     Type VI secretion: a beginner's guide
  JOURNAL   Curr Opin Microbiol 11 (1), 3-8 (2008)
   PUBMED   18289922
REFERENCE   5  (residues 1 to 330)
  AUTHORS   Folkesson,A., Lofdahl,S. and Normark,S.
  TITLE     The Salmonella enterica subspecies I specific centisome 7 genomic
            island encodes novel protein families present in bacteria living in
            close contact with eukaryotic cells
  JOURNAL   Res Microbiol 153 (8), 537-545 (2002)
   PUBMED   12437215
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018675.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06996.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..330
                     /product="type VI secretion system baseplate subunit TssG"
                     /calculated_mol_wt=36762
     Region          1..>155
                     /region_name="COG3520"
                     /note="Predicted component of the type VI protein
                     secretion system [Intracellular trafficking, secretion,
                     and vesicular transport]"
                     /db_xref="CDD:442742"
     Region          <148..259
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mgreaqpphs rltprleadl prinfyrfcq llekrrpgqp lmggtshpad dpvrfyphpg
       61 mgfpaselka veydeaddsr ppvirttfmg lygvdsplpt aylddiaqhr eghealqgll
      121 difshrimtq fyriwrkysw patfepggtd rlshydtkae ierhirrqpl aativrpatf
      181 mellvmpgfg ldegrfqffm lpegrmqvla vedighlvaa vfaaparfag ktfeiasdsv
      241 tgrqleglfs aaagrpipys rfsdevlaas pflhkltglv ddgrlaghad ldalrqlhpq
      301 lhtfagwlag pgrpaferal tsgarwafds
//
LOCUS       WP_258017290             206 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Salmonella enterica].
ACCESSION   WP_258017290
VERSION     WP_258017290.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 206)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 206)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012234.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00004.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         1..206
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=22680
     Region          102..>196
                     /region_name="COG1223"
                     /note="Predicted ATPase, AAA+ superfamily [General
                     function prediction only]"
                     /db_xref="CDD:440836"
ORIGIN      
        1 minvtnemli dvvsdaltgk resllmrlri makklkkesp elagkledll intggaiave
       61 ranpvvpkit pvdadtrqkl lvetypvvid vepvwptktd vqlnrfvaew emkerlykeg
      121 lhpsksllmg gppgvgktla akwlafkldm plltldlasv mssylgktgn nikavlnyas
      181 sfpcvlllde fdaiakkgmm qqmlen
//
LOCUS       WP_258017303             307 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP cone domain-containing protein, partial [Chlamydia suis].
ACCESSION   WP_258017303
VERSION     WP_258017303.1
KEYWORDS    RefSeq.
SOURCE      Chlamydia suis
  ORGANISM  Chlamydia suis
            Bacteria; Pseudomonadati; Chlamydiota; Chlamydiia; Chlamydiales;
            Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Aravind,L., Wolf,Y.I. and Koonin,E.V.
  TITLE     The ATP-cone: an evolutionarily mobile, ATP-binding regulatory
            domain
  JOURNAL   J Mol Microbiol Biotechnol 2 (2), 191-194 (2000)
   PUBMED   10939243
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03477.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Chlamydia suis"
                     /db_xref="taxon:83559"
     Protein         <1..>307
                     /product="ATP cone domain-containing protein"
     Region          1..>307
                     /region_name="PRK12365"
                     /note="ribonucleoside-diphosphate reductase subunit alpha"
                     /db_xref="CDD:171440"
ORIGIN      
        1 mvdlqekqct ivkrngmfvp fdrnrivqal eaafrdtrri ddhtplpedl essirsitqq
       61 vvkevvqkia dgqvvtveri qdmvenqlyi nglqdiardy ivyrgdrkah rekswqslsv
      121 irrcgtvvhf npmkisaale kafraterie gvtpdfvree intltqkivs eieercaqqd
      181 sridieqiqd iveqqlmvvg hyaiaknyil yreararvrd nrgedktiek asseeafdvl
      241 gkdgstykit hpqllarlar acsrfpettd aalltdmafs nfysgikese vvlacimaar
      301 aniekep
//
LOCUS       WP_258017362             163 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein [Salmonella enterica].
ACCESSION   WP_258017362
VERSION     WP_258017362.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 163)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         1..163
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=17962
     Region          10..>132
                     /region_name="uvrD"
                     /note="DNA helicase II; TIGR01075"
                     /db_xref="CDD:130147"
ORIGIN      
        1 mfpdqsapnl lqglnpeqls avtwppqsal vlagagsgkt rvlttriawl lqtgqasvhs
       61 imavtftnka akemqtrlga mipvdvramw lgtfhglchr flrlhhrdag lpssfqildg
      121 gdqlslikrl lkkpqhrrrn hraafaarly qrdkknpvca lps
//
LOCUS       WP_258017390             233 aa            linear   BCT 02-MAR-2025
DEFINITION  SAF domain-containing protein [Streptomyces noursei].
ACCESSION   WP_258017390
VERSION     WP_258017390.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 233)
  AUTHORS   Iyer,L.M. and Aravind,L.
  TITLE     The emergence of catalytic and structural diversity within the
            beta-clip fold
  JOURNAL   Proteins 55 (4), 977-991 (2004)
   PUBMED   15146494
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020250.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08666.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..233
                     /product="SAF domain-containing protein"
                     /calculated_mol_wt=23002
     Region          60..122
                     /region_name="SAF"
                     /note="SAF domain; pfam08666"
                     /db_xref="CDD:430140"
ORIGIN      
        1 msknaashed vpslerarpv apprvgprrr rpgvialgvv lvagggvggs mlylhngqrt
       61 pvltvvrevp vgatvtdadl geasvaldpa vkavpsrdrg svvgkraava ltpgsllsas
      121 qvttttllkp geqlvpvglk peqvpassgs slspgarvqi vrvagenqpa kapgapgegq
      181 pisarvvqvg spapgtgavv ldvavasadg prlaawvstg narvlvdapg dga
//
LOCUS       WP_258017393             373 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Streptomyces noursei].
ACCESSION   WP_258017393
VERSION     WP_258017393.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024793.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13401.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..373
                     /product="AAA family ATPase"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=41510
     Region          <120..>187
                     /region_name="RAD55"
                     /note="RecA-superfamily ATPase, KaiC/GvpD/RAD55 family
                     [Signal transduction mechanisms]; COG0467"
                     /db_xref="CDD:440235"
ORIGIN      
        1 msprrralhd lhrtathvnm rlqetpmsrr vsdlmrgrlq nnavkfmpgt rdglminggg
       61 fqgktetacs aaaafedlwr avhhqllpdq aplagtrdvf vpvaycrlpv katpkalckt
      121 ildvygdphp ntlddlirsv rdavrdhntt alliddvtrl rlhrgddqdt ldlirelmdl
      181 nvtlvligvd iphsgllrga yidphtrqwv fpdvkrgksh ndgastqter rfdmvdldpf
      241 dystptgita flehlagiee qlrlfhsceg mlttggmpey lfrrthgivg llrrlvedgc
      301 teaitsgeer ltpellarts irlgnladld peagevpeip lnvkppqqpr kkagrrprnt
      361 vfddqgdrpa adg
//
LOCUS       WP_258017414             222 aa            linear   BCT 02-MAR-2025
DEFINITION  Mu transposase domain-containing protein [Streptomyces noursei].
ACCESSION   WP_258017414
VERSION     WP_258017414.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 222)
  AUTHORS   Rice,P. and Mizuuchi,K.
  TITLE     Structure of the bacteriophage Mu transposase core: a common
            structural motif for DNA transposition and retroviral integration
  JOURNAL   Cell 82 (2), 209-220 (1995)
   PUBMED   7628012
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046294.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22483.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..222
                     /product="Mu transposase domain-containing protein"
                     /calculated_mol_wt=24453
     Region          <3..161
                     /region_name="COG4584"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:443641"
ORIGIN      
        1 mtrdkprver pmpyvrdsfw rgreftsveh mqaesvtwsk qvagrrqcrp lggaapmaaf
       61 etveadtllp lpptpfvlar wstatvgpdi hikvgrtlys vpwkligrrv dvrstatvvq
      121 vfldgqlvkt haaleqgkrt dksdyppeki aflslhstsp wspccrttar rfcctvvlar
      181 rfggpdgsrs ltgrasrtac gdgsgsvtlg apvfllkrrv tr
//
LOCUS       WP_258017444             274 aa            linear   BCT 02-MAR-2025
DEFINITION  group II intron maturase-specific domain-containing protein
            [Streptomyces noursei].
ACCESSION   WP_258017444
VERSION     WP_258017444.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 274)
  AUTHORS   Centron,D. and Roy,P.H.
  TITLE     Presence of a group II intron in a multiresistant Serratia
            marcescens strain that harbors three integrons and a novel gene
            fusion
  JOURNAL   Antimicrob Agents Chemother 46 (5), 1402-1409 (2002)
   PUBMED   11959575
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019984.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08388.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..274
                     /product="group II intron maturase-specific
                     domain-containing protein"
                     /calculated_mol_wt=31134
     Region          <19..99
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 mpgseggppq qcggptrrfn irryhgkllt kpskaamrri rerlstetha lrganaevli
       61 aklnpiirgw aayfrgvvss evftsldnhv wrlvykwarh thpnkpngwv tsryfgrfne
      121 srqdrwvfgd resgryltkf awtrivrhql vikgasvddp alteywasrr rrnkpplspr
      181 llsllqgqhg rcplcgtlll hadqqpqspq eweqwlrair tavranalta epdgsqsddp
      241 vafrlthvhc hrwrggnepr rpavlaargp sgpa
//
LOCUS       WP_258017479              95 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme [Streptomyces noursei].
ACCESSION   WP_258017479
VERSION     WP_258017479.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 95)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..95
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /calculated_mol_wt=9789
     Region          <23..88
                     /region_name="PRK07092"
                     /note="benzoylformate decarboxylase; Reviewed"
                     /db_xref="CDD:235931"
ORIGIN      
        1 midrsqaqga fsvrprkpqg gialrghgrv grpqsdappg ldlpgidias vargfgcrav
       61 dvetveeler efaaalsagt ttvivvptqp qvaml
//
LOCUS       WP_258017521             427 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Streptomyces noursei].
ACCESSION   WP_258017521
VERSION     WP_258017521.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 427)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 427)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 427)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..427
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=46512
     Region          35..418
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(133,163,165,196,198,396..398,400,402)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 msaipqntma pvdlttvgpg nghpvvqppv lggsdytdyy llndllddeq kalrrkvrdf
       61 mdqevtpiin pyweraefph elvpkiaqlg isglqikgyg cpgfsnvtag vvilelargd
      121 lsistftgvh aalammsial lgsdeqrarf lppmarleki gafgltepah gtdavklett
      181 arkdgdayvl nghkrwigna tfadyviiwa rgedghvggy vvekgtpgfe aeviagktal
      241 rcvqnaqisl tdvrvpaenr ladvhtfrdt ekvllasrfc vaweaigaai agyetalaya
      301 kqrkqfgipl aafqliqyrl srmladitdm lcmqyrlsql mdegkfsmpr valakmhyte
      361 rarailadar dmlggngiil dyhvarhlcd ieaidtyegt dtvqalivgr ditgysafvp
      421 ptpgagr
//
LOCUS       WP_258017546              96 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Clostridium sporogenes].
ACCESSION   WP_258017546
VERSION     WP_258017546.1
KEYWORDS    RefSeq.
SOURCE      Clostridium sporogenes
  ORGANISM  Clostridium sporogenes
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (residues 1 to 96)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 96)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 96)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 96)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Clostridium sporogenes"
                     /db_xref="taxon:1509"
     Protein         <1..96
                     /product="ATP-binding protein"
     Region          <1..79
                     /region_name="HATPase"
                     /note="Histidine kinase-like ATPase domain; cl00075"
                     /db_xref="CDD:469604"
     Site            order(21,23,25,27,44..47,64,66,71..72,74)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340431"
     Site            order(34,47)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340431"
ORIGIN      
        1 gggwikltak kqskneyyin vedngagmtp ekqkdllsad fdrsvglkni nqrlkhfcgs
       61 elmissipda gtsvsmlihl aettgipkel kdtert
//
LOCUS       WP_258017569             257 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-binding domain-containing protein [Streptomyces noursei].
ACCESSION   WP_258017569
VERSION     WP_258017569.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015747.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03807.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..257
                     /product="NAD(P)-binding domain-containing protein"
                     /calculated_mol_wt=27922
     Region          15..250
                     /region_name="PRK06476"
                     /note="pyrroline-5-carboxylate reductase; Reviewed"
                     /db_xref="CDD:235812"
ORIGIN      
        1 mkrigiigvg eigraivmsl rhggdessev flsprgarta aelseryegv rvcadnqevv
       61 drselliiav rrqdhheala gvrvdddkvv vnvmagvgnd glrrslatga plvraiplpa
      121 irerrsvtvv ypshpevdsf ferlggvlpv vdeaafdvfs altgtltthy tylatltswa
      181 adqgiaseda dryirslfqg vgrslsdetr slhqlaadhe tpngnnerir ttwfdqansq
      241 altsaldall thlshrt
//
LOCUS       WP_258017579             528 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent monooxygenase [Streptomyces noursei].
ACCESSION   WP_258017579
VERSION     WP_258017579.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 528)
  AUTHORS   Schreuder,H.A., van der Laan,J.M., Swarte,M.B., Kalk,K.H., Hol,W.G.
            and Drenth,J.
  TITLE     Crystal structure of the reduced form of p-hydroxybenzoate
            hydroxylase refined at 2.3 A resolution
  JOURNAL   Proteins 14 (2), 178-190 (1992)
   PUBMED   1409567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01494.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..528
                     /product="FAD-dependent monooxygenase"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /calculated_mol_wt=54751
     Region          23..515
                     /region_name="PRK06126"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:235704"
ORIGIN      
        1 mtetmypevp vlvvgggsvg lltaallahh gvpavlverr sgpsvhprat gigprtvevl
       61 relgldtavd avavdlrgaa gkavartvve mgagdvttvp mptpsaaeld ttpfrlrgvc
      121 aqdrldavva adlarrgadl rwstrlvgia qdadgadvel egpdgryslr carvvaadga
      181 hsavrsalgv gtsgagdlgk sminilfrad lrphlrgmsf gtctittpea pgllvtvdgk
      241 tnwvfhiacd vdggerpedf thercaavvr aavgdpdldv evrsalpwrp rssladrfav
      301 grvflvgdaa htvaplgafg lntgvadahn lawklaavhk geagtglldt yaqerkpvaa
      361 atldqamrrl adpqlhwgrg peadaaraaa gvwaapvvhl gqrydsaavi dprpelpstv
      421 dlavaldgsp gsrvphawvd gvstldlvas rwtvlvgvag drwlaaaadv glpahrvsap
      481 wlsddgavlv rpdaivamrv tapvpdpaqf ladvldqvla rpvvvpsa
//
LOCUS       WP_258017591             262 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Streptomyces noursei].
ACCESSION   WP_258017591
VERSION     WP_258017591.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 262)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 262)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..262
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=28202
     Region          3..257
                     /region_name="PRK06196"
                     /note="oxidoreductase; Provisional"
                     /db_xref="CDD:235736"
ORIGIN      
        1 mhaevtlavr dvaagervak eitastgnre vrvapldltd lasvtafvda wqgplhilvn
       61 nagvmacpeq yteqgwewqf atnhlghfal atglhhalaa dgnarvvavs stghqqspiv
      121 wddinfafrp ydpwlaygqs ktanalftve asrrwaddni tanalmpgai ytnlqrhtgg
      181 rgsgrvpael iktveqgaat svllatspll egiggryfvd cnetevvdrr sgtlhgvary
      241 avdpvgarrl wdlshdllaq ar
//
LOCUS       WP_258017599             134 aa            linear   BCT 02-MAR-2025
DEFINITION  TSUP family transporter [Streptomyces noursei].
ACCESSION   WP_258017599
VERSION     WP_258017599.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 134)
  AUTHORS   Krejcik,Z., Denger,K., Weinitschke,S., Hollemeyer,K., Paces,V.,
            Cook,A.M. and Smits,T.H.
  TITLE     Sulfoacetate released during the assimilation of taurine-nitrogen
            by Neptuniibacter caesariensis: purification of sulfoacetaldehyde
            dehydrogenase
  JOURNAL   Arch Microbiol 190 (2), 159-168 (2008)
   PUBMED   18506422
REFERENCE   2  (residues 1 to 134)
  AUTHORS   Weinitschke,S., Denger,K., Cook,A.M. and Smits,T.H.M.
  TITLE     The DUF81 protein TauE in Cupriavidus necator H16, a sulfite
            exporter in the metabolism of C2 sulfonates
  JOURNAL   Microbiology (Reading) 153 (Pt 9), 3055-3060 (2007)
   PUBMED   17768248
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014035.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01925.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..134
                     /product="TSUP family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=13209
     Region          20..>134
                     /region_name="TauE"
                     /note="Sulfite exporter TauE/SafE; cl46157"
                     /db_xref="CDD:480497"
ORIGIN      
        1 mthtdlwapl dwpgfggvtl aallflcvtp llagavdaiv ggggllqlpa mllvnpggav
       61 vhslatskmv glvgtsaavv tfarktpldw kavgqmaatt fpasvagaav asalpksvln
      121 tvvlcalviv glht
//
LOCUS       WP_258017602             183 aa            linear   BCT 02-MAR-2025
DEFINITION  plastocyanin/azurin family copper-binding protein [Streptomyces
            noursei].
ACCESSION   WP_258017602
VERSION     WP_258017602.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012355.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00127.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..183
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /GO_function="GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /calculated_mol_wt=17930
     Region          <38..>112
                     /region_name="AF-4_C"
                     /note="AF-4 proto-oncoprotein C-terminal region;
                     pfam18876"
                     /db_xref="CDD:465894"
     Region          101..182
                     /region_name="Amicyanin"
                     /note="Amicyanin is a type I blue copper protein that
                     plays an essential role in electron transfer; cd13921"
                     /db_xref="CDD:259988"
ORIGIN      
        1 mhlnfrtagr rsrtaaglav aaiatagalg llsscgqtsh fsstgagait pgpgqhrtag
       61 mpgaaglgnt agsasstspm pgmsmptsps sagapavpvt gnvvaiknfa fspatlkvkv
      121 gttvtwtnqd adahtvtsag pggplhsaal athatysytf tkpgtyaylc tihpfmtatv
      181 eva
//
LOCUS       WP_258017631             169 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase family protein [Streptomyces
            noursei].
ACCESSION   WP_258017631
VERSION     WP_258017631.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 169)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00725.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..169
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=18066
     Region          20..>78
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Region          <78..167
                     /region_name="FadB"
                     /note="3-hydroxyacyl-CoA dehydrogenase [Lipid transport
                     and metabolism]; COG1250"
                     /db_xref="CDD:440862"
ORIGIN      
        1 mlvprqddda aagdpaefam pslatgerva vfaateeeag telgrvrtav dedgddvvvt
       61 ghkrwvtfgq teddvlvlgm hfmnpatvle egtadggtvd rvfqgcfgha rgplrtadli
      121 gldtvldslh vllectadrr ytpcalltdl vqqshvgrkg grgfhtyvr
//
LOCUS       WP_258017646             574 aa            linear   BCT 02-MAR-2025
DEFINITION  MMPL family transporter [Streptomyces noursei].
ACCESSION   WP_258017646
VERSION     WP_258017646.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 574)
  AUTHORS   Tekaia,F., Gordon,S.V., Garnier,T., Brosch,R., Barrell,B.G. and
            Cole,S.T.
  TITLE     Analysis of the proteome of Mycobacterium tuberculosis in silico
  JOURNAL   Tuber Lung Dis 79 (6), 329-342 (1999)
   PUBMED   10694977
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015155.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03176.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..574
                     /product="MMPL family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=61142
     Region          11..>84
                     /region_name="Csa3"
                     /note="CRISPR-associated protein Csa3, CARF domain
                     [Defense mechanisms]; COG3415"
                     /db_xref="CDD:442641"
     Region          <106..540
                     /region_name="YdfJ"
                     /note="Predicted lipid transporter YdfJ, MMPL/SSD domain,
                     RND superfamily [General function prediction only];
                     COG2409"
                     /db_xref="CDD:441964"
ORIGIN      
        1 mpvrtpcpia lsaaervrlk kmtyghkteh rlrvraqvvl haargrsntp idreaglhld
       61 tvrrwrgrfa qrdlpglkda sakhvfwivd ngsshrgkka tdrlttafsa vvfagltvli
      121 aliglsvvnv pmltkmgvaa agtvaiavli altmipallg yagrkvkpag ekskllgggr
      181 gakkadrpnm gtrwasfvvr rpvavlllgv vglgaaaipa nslelglgdd gsqptsttqr
      241 raydllsegf gpgfngplmi vvdakdsdsp kgavakvtde ikglkhvttv tpatynksrd
      301 tatitvipds kpsstttedl vhsirdtsag ikadtgatal vigttamnid fsqklndali
      361 pylalvvgla flllilvfrs ilvplkaalg fllsvlaalg avvavfqwgw lsslfnveqt
      421 gpimsmmpif mvgvvfglam dyevflvtrm reayvhgetp sqavvtgfkh garvvtaaav
      481 imiavfsgfi gssesmikmv gfalaiavff dafivrmaiv pavlallgkr awwlptwldr
      541 alpnmdvege glktldedal kdadphedre lvra
//
LOCUS       WP_258017702             159 aa            linear   BCT 02-MAR-2025
DEFINITION  CHAP domain-containing protein [Streptomyces noursei].
ACCESSION   WP_258017702
VERSION     WP_258017702.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 159)
  AUTHORS   Pai,C.H., Wu,H.J., Lin,C.H. and Wang,A.H.
  TITLE     Structure and mechanism of Escherichia coli glutathionylspermidine
            amidase belonging to the family of cysteine; histidine-dependent
            amidohydrolases/peptidases
  JOURNAL   Protein Sci 20 (3), 557-566 (2011)
   PUBMED   21226054
REFERENCE   2  (residues 1 to 159)
  AUTHORS   Nelson,D., Schuch,R., Chahales,P., Zhu,S. and Fischetti,V.A.
  TITLE     PlyC: a multimeric bacteriophage lysin
  JOURNAL   Proc Natl Acad Sci U S A 103 (28), 10765-10770 (2006)
   PUBMED   16818874
REFERENCE   3  (residues 1 to 159)
  AUTHORS   Bateman,A. and Rawlings,N.D.
  TITLE     The CHAP domain: a large family of amidases including GSP amidase
            and peptidoglycan hydrolases
  JOURNAL   Trends Biochem Sci 28 (5), 234-237 (2003)
   PUBMED   12765834
REFERENCE   4  (residues 1 to 159)
  AUTHORS   Rigden,D.J., Jedrzejas,M.J. and Galperin,M.Y.
  TITLE     Amidase domains from bacterial and phage autolysins define a family
            of gamma-D,L-glutamate-specific amidohydrolases
  JOURNAL   Trends Biochem Sci 28 (5), 230-234 (2003)
   PUBMED   12765833
REFERENCE   5  (residues 1 to 159)
  AUTHORS   Bollinger,J.M. Jr., Kwon,D.S., Huisman,G.W., Kolter,R. and
            Walsh,C.T.
  TITLE     Glutathionylspermidine metabolism in Escherichia coli.
            Purification, cloning, overproduction, and characterization of a
            bifunctional glutathionylspermidine synthetase/amidase
  JOURNAL   J Biol Chem 270 (23), 14031-14041 (1995)
   PUBMED   7775463
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017102.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05257.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..159
                     /product="CHAP domain-containing protein"
                     /calculated_mol_wt=16887
     Region          8..123
                     /region_name="NLPC_P60"
                     /note="NlpC/P60 family; cl21534"
                     /db_xref="CDD:473902"
ORIGIN      
        1 mataadviri argeigyreg ysgghwnnhq ryspavpgle wsqnqawcat fvswcarqag
       61 agslfpvtas vwaaynwfrs rgrysaypai gsmvifgqsa nshtgvvvay dattittveg
      121 ntsvtgsaeg dgvylkrrlg ralgpagplh sgrgrrgce
//
LOCUS       WP_258017300              86 aa            linear   BCT 02-MAR-2025
DEFINITION  CT620/CT621 family type III secretion system effector, partial
            [Chlamydia suis].
ACCESSION   WP_258017300
VERSION     WP_258017300.1
KEYWORDS    RefSeq.
SOURCE      Chlamydia suis
  ORGANISM  Chlamydia suis
            Bacteria; Pseudomonadati; Chlamydiota; Chlamydiia; Chlamydiales;
            Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.
REFERENCE   1  (residues 1 to 86)
  AUTHORS   Muschiol,S., Boncompain,G., Vromman,F., Dehoux,P., Normark,S.,
            Henriques-Normark,B. and Subtil,A.
  TITLE     Identification of a family of effectors secreted by the type III
            secretion system that are conserved in pathogenic Chlamydiae
  JOURNAL   Infect Immun 79 (2), 571-580 (2011)
   PUBMED   21078856
REFERENCE   2  (residues 1 to 86)
  AUTHORS   Hobolt-Pedersen,A.S., Christiansen,G., Timmerman,E., Gevaert,K. and
            Birkelund,S.
  TITLE     Identification of Chlamydia trachomatis CT621, a protein delivered
            through the type III secretion system to the host cell cytoplasm
            and nucleus
  JOURNAL   FEMS Immunol Med Microbiol 57 (1), 46-58 (2009)
   PUBMED   19682078
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016407.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04518.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Chlamydia suis"
                     /db_xref="taxon:83559"
     Protein         <1..>86
                     /product="CT620/CT621 family type III secretion system
                     effector"
     Region          <1..>86
                     /region_name="Effector_1"
                     /note="Effector from type III secretion system; pfam04518"
                     /db_xref="CDD:309594"
ORIGIN      
        1 ldryeteksh lrkdinnaen akqqltqiik nvdannsltp tqksklkdma ngyirtldvc
       61 vtqmqelssg lrglafipgr deyspa
//
LOCUS       WP_258017731             551 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Streptomyces noursei].
ACCESSION   WP_258017731
VERSION     WP_258017731.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..551
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=56840
     Region          25..514
                     /region_name="PRK14995"
                     /note="SmvA family efflux MFS transporter"
                     /db_xref="CDD:184957"
ORIGIN      
        1 msgttasgrg rtagvprhtg ggvnrwtvlt vlcvsllfva ldttilyvav psitedlrpg
       61 pvellwivdi ypliaaslli lfgtlgdrvg rrrvlllgyg lfalasaaaa lapnpqilma
      121 arallgigga mimpatlsil rqvfpdrrer avaigvwsav aavgaavgpv lggflvenfw
      181 wgsvflinip mmaamfligr wllpesrger ngpwdllgav iaalgvlgvv fgvkrlgsga
      241 pvvgvttllp ivigvallil fvrrqgrrah plidmrlfar pafgtsigci vlamlalvgl
      301 qliavqylql vlhlspletg lrmlplvfsa maagltgskl lqalgprvmv vggftltala
      361 vlsltalgsq dhfwqlslgf vllgfgfqst lfgayesmls eapaaqsgga aalgetayql
      421 gagigvallg svmnaayapg lgrvegvsdr aarsashslg eaykvaaglg eharealrva
      481 ardsfvhglr vtlvasavll lvgagialrl prraaaesve rdaaeegata aeesapavgc
      541 egtpapastg r
//
LOCUS       WP_258017747             239 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY-family carbohydrate kinase, partial [Brachyspira pilosicoli].
ACCESSION   WP_258017747
VERSION     WP_258017747.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira pilosicoli
  ORGANISM  Brachyspira pilosicoli
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 239)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 239)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02782.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Brachyspira pilosicoli"
                     /db_xref="taxon:52584"
     Protein         <1..239
                     /product="FGGY-family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <1..233
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 kpfdiiavas hdtasavlsa pifddntayl ssgswsllgv elkeavltde afengftnem
       61 gynntirfle ninglwtiql lqkkyqisfn dmeqlardni kdehridind nrfynpkdie
      121 deilnyykdt nqaniekdkk gviiasvyns laesyakyin slkkllnkdi nklcivgggt
      181 kdkliceltk ektnltvsvg piectatgni laqfkalgvl kdtnemrklv vnsfdikqi
//
LOCUS       WP_258017754             145 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Brachyspira
            pilosicoli].
ACCESSION   WP_258017754
VERSION     WP_258017754.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira pilosicoli
  ORGANISM  Brachyspira pilosicoli
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Brachyspira pilosicoli"
                     /db_xref="taxon:52584"
     Protein         <1..145
                     /product="ABC transporter substrate-binding protein"
     Region          <1..139
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 ifeaiqqmwk nnlgidttiv seewavfqss rysrtyviar ngwigdyddp mtflgmflsy
       61 spqnvesyns aiydrllana satddntirm pllhkaeelf medmpiiply yytlpllvnd
      121 nlkdvqydvl gkhkffyayy dntek
//
LOCUS       WP_258017750             518 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein [Streptomyces noursei].
ACCESSION   WP_258017750
VERSION     WP_258017750.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 518)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..518
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=56040
     Region          5..476
                     /region_name="UvrD"
                     /note="Superfamily I DNA or RNA helicase [Replication,
                     recombination and repair]; COG0210"
                     /db_xref="CDD:439980"
ORIGIN      
        1 mhtptpeqta aaeafptgah lviqagagtg ktttlamlah tarrqrrtgr ylafnravar
       61 haarafpaev tcgtahalay tavgrhyqar lnaprqagwr tgaalgieeg mclrigprkv
      121 nnkalsytvl rtvtrfcqsa dkeiahphvp plrgaeaepl htqlaglvlp yarrawadlh
      181 hpdhgvvrfe hdhylkmwal sapvipadfl lldeaqdtnp vveqvltaqr ahaqlvlvgd
      241 saqaiygwrg ardvmtgfdg thlslsrsfr fgpalasean rwltivdapi rltgsprqet
      301 elcrlaapda ilcrtnvgam vevirqldah rrvalaggge plralarath dlasgrrtah
      361 pelmlfeswc elreyaefdp agrdllplve lidehgadtv lgaldrlspe asaevtvsta
      421 hrakgrewss vriaddftcp ddlderdedg tplpgpidld earlayvavt rarsrldigg
      481 lswinthpag dprpeggalp gtegrraraa agkgghdt
//
LOCUS       WP_258017759             143 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Brachyspira
            pilosicoli].
ACCESSION   WP_258017759
VERSION     WP_258017759.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira pilosicoli
  ORGANISM  Brachyspira pilosicoli
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Brachyspira pilosicoli"
                     /db_xref="taxon:52584"
     Protein         <1..143
                     /product="ABC transporter substrate-binding protein"
     Region          <1..141
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 ifeaiqqmwk enlnidtrvn qlewgvfmqt trgdknfeia rsgwmgdynd pmtfldtfls
       61 yspqntgsyy nkeyeqliqs altngdkisr mqtlhkaedv lmedmpfipl yfynrvilvr
      121 pelkdvmisn vipprffyay vek
//
LOCUS       WP_258017760             167 aa            linear   BCT 02-MAR-2025
DEFINITION  Asd/ArgC dimerization domain-containing protein, partial
            [Brachyspira pilosicoli].
ACCESSION   WP_258017760
VERSION     WP_258017760.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira pilosicoli
  ORGANISM  Brachyspira pilosicoli
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 167)
  AUTHORS   Hadfield,A., Kryger,G., Ouyang,J., Petsko,G.A., Ringe,D. and
            Viola,R.
  TITLE     Structure of aspartate-beta-semialdehyde dehydrogenase from
            Escherichia coli, a key enzyme in the aspartate family of amino
            acid biosynthesis
  JOURNAL   J Mol Biol 289 (4), 991-1002 (1999)
   PUBMED   10369777
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014793.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02774.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Brachyspira pilosicoli"
                     /db_xref="taxon:52584"
     Protein         <1..167
                     /product="Asd/ArgC dimerization domain-containing protein"
                     /GO_function="GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA]"
                     /GO_function="GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /GO_process="GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
     Region          <2..167
                     /region_name="ArgC"
                     /note="N-acetyl-gamma-glutamylphosphate reductase [Amino
                     acid transport and metabolism]; COG0002"
                     /db_xref="CDD:439773"
ORIGIN      
        1 atgagrelkl nthytecnea fapykiaehr htpeieqtls niygedikvt fvphllplnr
       61 givstiyakl enknlkledi hniykefykd safvrvlnig eianlkyvky snycdislhm
      121 derinkliiv stidnmvkga agqaiqnmni alglkedegl niippaf
//
LOCUS       WP_258017782             245 aa            linear   BCT 02-MAR-2025
DEFINITION  rhomboid-like protein [Streptomyces noursei].
ACCESSION   WP_258017782
VERSION     WP_258017782.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042501.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20401.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..245
                     /product="rhomboid-like protein"
                     /calculated_mol_wt=24292
     Region          25..200
                     /region_name="Rhomboid_2"
                     /note="Rhomboid-like protein; pfam20401"
                     /db_xref="CDD:466550"
ORIGIN      
        1 maplyvgalq cgayatarlp vprraellra hstnvanlra grwgtlatsa afveeplpaa
       61 ygvallaalg taearwgagr aaavfaaghv gasllvyagl rgrrwarrat arpeaaggag
      121 tahavdvgas ygfyatlgal aasaphrgar aaatggllal gavpvvrrgr tftdvghlta
      181 lalgvamgaa ripvrgripa tgrdvtgpal sttpargrav garpapawrp agrgpggias
      241 pragv
//
LOCUS       WP_258017800             222 aa            linear   BCT 02-MAR-2025
DEFINITION  histidine phosphatase family protein, partial [Streptomyces
            noursei].
ACCESSION   WP_258017800
VERSION     WP_258017800.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 222)
  AUTHORS   Rigden,D.J.
  TITLE     The histidine phosphatase superfamily: structure and function
  JOURNAL   Biochem J 409 (2), 333-348 (2008)
   PUBMED   18092946
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012521.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00300.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         <1..222
                     /product="histidine phosphatase family protein"
     Region          <40..222
                     /region_name="PRK07238"
                     /note="bifunctional RNase H/acid phosphatase; Provisional"
                     /db_xref="CDD:180903"
ORIGIN      
        1 praapacwrt aacspgssap rcrrrrapsg rrppasrcgs ggtdpelsda grrqaeaaaa
       61 alaargtiqa vvssplrrcq etagavaarl gldvrveegl readfgaweg ltfaevrery
      121 pddldawlgs tkaaptggge sfatvarrva vardkllsry agktvllvth vtpiktlvrl
      181 algappeslf rmelsaaslt avayyadgna slrllndtsh lr
//
LOCUS       WP_258017828             300 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Streptomyces noursei].
ACCESSION   WP_258017828
VERSION     WP_258017828.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..300
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=30007
     Region          <80..228
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mtltgtllll llllllllll llllvvlgre qhwprwagvc laavvpaagl fvlveravar
       61 rggtplvpgr vlrspdllcg aaalffcmag yagflfalsq hlqtglgesa vhagltfapl
      121 avgvaagslt wqrlparwhl pmiaaacala avsylglgaa lrgggtggpv vlllqllwgl
      181 gmgfttspll tlalsgiapa daadasgvlt tvpqlaqvig vagygsvfla gaagpggraa
      241 asagalcata lpvavgslla glavlpllrr rrlpdggaaa ryttpdaeva fppaanygln
//
LOCUS       WP_258017836             577 aa            linear   BCT 02-MAR-2025
DEFINITION  SpoIIE family protein phosphatase, partial [Brachyspira
            pilosicoli].
ACCESSION   WP_258017836
VERSION     WP_258017836.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira pilosicoli
  ORGANISM  Brachyspira pilosicoli
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 577)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Brachyspira pilosicoli"
                     /db_xref="taxon:52584"
     Protein         <1..577
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
     Region          16..155
                     /region_name="GAF_2"
                     /note="GAF domain; cl21515"
                     /db_xref="CDD:473894"
     Region          109..>345
                     /region_name="GAF"
                     /note="GAF domain [Signal transduction mechanisms];
                     COG2203"
                     /db_xref="CDD:441805"
     Region          <302..573
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
ORIGIN      
        1 ievfsniikk mnsstdyees litliseika vmnsntilly lvdqelnnln femsigplgn
       61 nffgsiidnd kpiavraytt saslysndpk edsnfvpikd migdelknil fvpvkirkrn
      121 iaaifllnkk ngnfvekdti lmrsfahlvs lslvnkinye kaqsrayeva alyemsisin
      181 rcetvdeiln nnisivceaf eahrvsvilk engvfkfkaa igidedvlqy gavtvednvl
      241 aeilktkkav ysvnvskdhr fkpnkslryk resfiaapii ikdeiigflc aterninkay
      301 nlsnlmllem laqqlgenym hvllseeski keslteeiny teqlqksvlp thfpndnlfd
      361 iaaisipskn vggdfydyik issskyalii advsgkglga gffmtmtrsi lrvyfsqidd
      421 pasilkytnk hiyedskngm fvtcfllvid tknktltysn aghlpqylvr kddssntkii
      481 eemhtkgkpl gfvknetyin nkisyssddt ivlftdgvtd tfnrfdevyg edrlkellkn
      541 dydkpkelld diveetvtfr deiaqfddit llitkil
//
LOCUS       WP_258017958             184 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Streptomyces noursei].
ACCESSION   WP_258017958
VERSION     WP_258017958.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 184)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07883.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..184
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=20487
     Region          32..138
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 mqypapryhg drgevnasfr padtppdlts pggdayryla thestggeyg lykvdlaara
       61 agakthfhka msesfyvlsg elelfngekw vtgragdfly vpvgglhafk nvtdepmsml
      121 mlfspgapre effervaems qrgsaelkef rvrhdsyfee dfekgyekds eegfgsgdav
      181 mdrr
//
LOCUS       WP_258018034              88 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidase inhibitor family I36 protein [Streptomyces noursei].
ACCESSION   WP_258018034
VERSION     WP_258018034.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 88)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
REFERENCE   2  (residues 1 to 88)
  AUTHORS   Ohno,A., Tate,S., Seeram,S.S., Hiraga,K., Swindells,M.B., Oda,K.
            and Kainosho,M.
  TITLE     NMR structure of the Streptomyces metalloproteinase inhibitor,
            SMPI, isolated from Streptomyces nigrescens TK-23: another example
            of an ancestral beta gamma-crystallin precursor structure
  JOURNAL   J Mol Biol 282 (2), 421-433 (1998)
   PUBMED   9735297
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03995.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..88
                     /product="peptidase inhibitor family I36 protein"
                     /calculated_mol_wt=9154
ORIGIN      
        1 malpagtala atgkfgwvgp kgqpyfiqnp pnskcltmnq earaprnstk qavavysgkh
       61 cdgrvtrlap gksapsgthf ssvvfnpr
//
LOCUS       WP_258018052             514 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent monooxygenase [Streptomyces noursei].
ACCESSION   WP_258018052
VERSION     WP_258018052.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 514)
  AUTHORS   Schreuder,H.A., van der Laan,J.M., Swarte,M.B., Kalk,K.H., Hol,W.G.
            and Drenth,J.
  TITLE     Crystal structure of the reduced form of p-hydroxybenzoate
            hydroxylase refined at 2.3 A resolution
  JOURNAL   Proteins 14 (2), 178-190 (1992)
   PUBMED   1409567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01494.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..514
                     /product="FAD-dependent monooxygenase"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /calculated_mol_wt=55283
     Region          6..500
                     /region_name="PRK06126"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:235704"
ORIGIN      
        1 mpdapdvpvl vvgagpvgls tgmflahwgv rplvvdkrpd amaavprast slrtlelfra
       61 mglgaalere gweggmpmrt vfkdsglgst lhrgglppry arlvencspv pprlvlthdq
      121 vqrlaweelr rrggevrlgv rlvgltpgdd hvrarlvdva tgeeseitag yligadgaks
      181 dvrtrlgitm pdrtvidhln tafyradlgp vqrdwgtdvc fvrndavyat lmskngrdqw
      241 athildhpgk ppagsselte datlallrsa igdatipiel havnaweaai gmasafrqgr
      301 vflagdaahv qssagglgmn tgiqdghnla wklaavlhgh saptlldsye perraaaras
      361 lalsrnllqg yqaldgdpnd lydtlavdyl rammfygypp hgtvtgpgpd plddiirpgh
      421 rfphrwlntp phsristldl igsgwtlfta adlprwraaa allglkpqrv hklgaphasd
      481 lalgddavlv rpdgfvawrg tteealraal regr
//
LOCUS       WP_258018053             348 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase [Streptomyces noursei].
ACCESSION   WP_258018053
VERSION     WP_258018053.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 348)
  AUTHORS   Keller,N.P., Dischinger,H.C. Jr., Bhatnagar,D., Cleveland,T.E. and
            Ullah,A.H.
  TITLE     Purification of a 40-kilodalton methyltransferase active in the
            aflatoxin biosynthetic pathway
  JOURNAL   Appl Environ Microbiol 59 (2), 479-484 (1993)
   PUBMED   8434913
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013087.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00891.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..348
                     /product="methyltransferase"
                     /GO_function="GO:0008171 - O-methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=36891
     Region          127..329
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
ORIGIN      
        1 mntpnptdhp dltgaaahag aahlieqslg hlysaalrta alhhladhla ggprtaaela
       61 rltgtdavfl rrclrylasr evfreddnga fhltptaqfl ragvpgslrd avlmltdeif
      121 vrsssaldet irtgapgfak vfgapffeyl qgapktrelf dsgmaafsep iddlvasayp
      181 fpergtvvdv gggrggllrh illrhpglsg vlldqaaavq dhvldtaels grwraepgdf
      241 ftsvpaggdv yvlkhvlhdw ddasavrilt acrhglapdg kvlvvdsvpv pgnaphpgka
      301 ldmammtvvt gkergpkeld dlfsraglrr tqilptptfa siveavaa
//
LOCUS       WP_258017722            1101 aa            linear   BCT 02-MAR-2025
DEFINITION  polymorphic outer membrane protein middle domain-containing
            protein, partial [Chlamydia suis].
ACCESSION   WP_258017722
VERSION     WP_258017722.1
KEYWORDS    RefSeq.
SOURCE      Chlamydia suis
  ORGANISM  Chlamydia suis
            Bacteria; Pseudomonadati; Chlamydiota; Chlamydiia; Chlamydiales;
            Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.
REFERENCE   1  (residues 1 to 1101)
  AUTHORS   Thomson,N.R., Yeats,C., Bell,K., Holden,M.T., Bentley,S.D.,
            Livingstone,M., Cerdeno-Tarraga,A.M., Harris,B., Doggett,J.,
            Ormond,D., Mungall,K., Clarke,K., Feltwell,T., Hance,Z.,
            Sanders,M., Quail,M.A., Price,C., Barrell,B.G., Parkhill,J. and
            Longbottom,D.
  TITLE     The Chlamydophila abortus genome sequence reveals an array of
            variable proteins that contribute to interspecies variation
  JOURNAL   Genome Res 15 (5), 629-640 (2005)
   PUBMED   15837807
REFERENCE   2  (residues 1 to 1101)
  AUTHORS   Wehrl,W., Brinkmann,V., Jungblut,P.R., Meyer,T.F. and Szczepek,A.J.
  TITLE     From the inside out--processing of the Chlamydial autotransporter
            PmpD and its role in bacterial adhesion and activation of human
            host cells
  JOURNAL   Mol Microbiol 51 (2), 319-334 (2004)
   PUBMED   14756775
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019186.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07548.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Chlamydia suis"
                     /db_xref="taxon:83559"
     Protein         <1..1101
                     /product="polymorphic outer membrane protein middle
                     domain-containing protein"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
     Region          100..>609
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          557..763
                     /region_name="ChlamPMP_M"
                     /note="Chlamydia polymorphic membrane protein middle
                     domain; pfam07548"
                     /db_xref="CDD:311484"
     Region          817..1091
                     /region_name="Autotransporter"
                     /note="Autotransporter beta-domain; smart00869"
                     /db_xref="CDD:214872"
ORIGIN      
        1 tpgapgaaas sslffltast dpvaaapnad qeidpnadkd flidyvvntt iskntakqkg
       61 agvyakkakl sridalnisn nsaqetgggi ccteslelda ivslsvtdnl agkeggalha
      121 ktltvshlqs gfsfsnntan ssstgaittt tqpaspsaal pkasaggpsa psqttptyag
      181 vvggaiygdt vsfskcsglc qfsgnsaidn tpsspslnvq ggaiyaktsl sieaedpsts
      241 yvfagnsvss gkaqtsgqia ggaifspkit lncpttfsgn tasmatatss sgssikdtig
      301 gaiagttisl sgtsrfsena adlgaaigtl gapsgsqptl tekislengs fsfeknkank
      361 rgaiyapsvs ikgnnitfnq ntskhdgsai yftkdaties lgsvlftgnn vtdaqanspq
      421 tpgqttnttn ygaaifgdpg sspqtqtdtt lkliassgni tfsnnsqntn pdnpakkfcs
      481 iagyvklslq aaqgrsisff dsihtstkkt gqtqsnyesl dinksennkt ysgtisfsse
      541 lhenksyipq nvvlhsgtlv lkektelhvv sfeqkpgssl imepgavlsn qniangalai
      601 ngltidlssm gtpqageifs ppelrivats snsaggggss nsggasgsgg gvggvggkvt
      661 askelytaaa avpvatnptm senkvfltgn ltlidpngnf yqnpilgtdl sdvpliklps
      721 ntsdidvsdl tlsgdlspkk gyigtwtlnp dpqtgkvvan wkfdmyrrwv yiprdnhfya
      781 nsilgsqnsm ivvkqglinn mlnnarfddi aynnfwvsgv gtflsqqgtp lseefsyysr
      841 gtsvaidakp rpdfilgaaf skmvgrtkai kkihnyfhkg seysyqasvy ggkflyflln
      901 kqqgwalpfl lqgvvsyghi khdtttryps ihelnkgdwe dlgwlvdlrv smdlkepskn
      961 sskrvslyge leyssirqka fteidydprh fddcayrnls vpvgcsfega imsydilmyn
     1021 klslaympsi yrnipvckyr vlssnetgev vcgvptrtsa raeystqlyl gpfwtlygny
     1081 tidvgmytls qmtscgarmi f
//
LOCUS       WP_258018108             116 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Streptomyces noursei].
ACCESSION   WP_258018108
VERSION     WP_258018108.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024751.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13358.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..116
                     /product="transposase"
                     /calculated_mol_wt=13398
     Region          <4..75
                     /region_name="transpos_IS630"
                     /note="IS630 family transposase; NF033545"
                     /db_xref="CDD:468076"
ORIGIN      
        1 mfwivdngss hrgqkaadrl teafpnavmv htpvhapwln qvelyfsvvq rralspndft
       61 dltevrnrlr afedrynima qpfqwkfans dlddllarld rhtadhpees sfrlta
//
LOCUS       WP_258018109             233 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Streptomyces noursei].
ACCESSION   WP_258018109
VERSION     WP_258018109.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024954.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13565.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..233
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=25401
     Region          1..>190
                     /region_name="transpos_IS630"
                     /note="IS630 family transposase; NF033545"
                     /db_xref="CDD:468076"
ORIGIN      
        1 mdtvrswrgr ftdlglpgla drkrtgqttv ftalqtaqvk alacqlpaea gvplsrwscl
       61 elareavtrr iapalsastv rrwldqdaik pwqhrswifi sdsdfrpkat rvldlytrng
      121 grvplgadey vvsadektsi qarcrchstl apgkaramrv nhtygrggal aylaaydvhr
      181 arvfgrtepr tgivpfmslv tqvmsqrptp apsvcsgsst tapptvarkp ptg
//
LOCUS       WP_258018131             300 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6397 family protein [Streptomyces noursei].
ACCESSION   WP_258018131
VERSION     WP_258018131.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 300)
  AUTHORS   Schwartz,D., Berger,S., Heinzelmann,E., Muschko,K., Welzel,K. and
            Wohlleben,W.
  TITLE     Biosynthetic gene cluster of the herbicide phosphinothricin
            tripeptide from Streptomyces viridochromogenes Tu494
  JOURNAL   Appl Environ Microbiol 70 (12), 7093-7102 (2004)
   PUBMED   15574905
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040401.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19934.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..300
                     /product="DUF6397 family protein"
                     /calculated_mol_wt=32871
     Region          17..262
                     /region_name="DUF6397"
                     /note="Family of unknown function (DUF6397); pfam19934"
                     /db_xref="CDD:466236"
ORIGIN      
        1 mtvtvmcdgr qtlsmaraaq elelrtgefe latqlgevrt vpaapdrrpg sagpparhrv
       61 paaevarlqa epgfpetlra rlravttnea aalmgigpgr alrltragcv gpvrfyvnrf
      121 gavvwlylas eitefadrep ellqgntpva mrvmltsgqd wrarqwrsrr vaqlmgrtdd
      181 pwqsaaviaa vlppeelasv aedplerall rrlrpvlasm itatpaares fervltaeef
      241 devlwyrvnl sraletarre dpgrvrpsat vragrpptrg tvpansptwg pdprslsvra
//
LOCUS       WP_258018152             191 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Streptomyces noursei].
ACCESSION   WP_258018152
VERSION     WP_258018152.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024751.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13358.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..191
                     /product="transposase"
                     /calculated_mol_wt=21674
     Region          7..142
                     /region_name="DDE_3"
                     /note="DDE superfamily endonuclease; pfam13358"
                     /db_xref="CDD:433142"
     Region          <119..>172
                     /region_name="PRK14090"
                     /note="phosphoribosylformylglycinamidine synthase subunit
                     PurL"
                     /db_xref="CDD:184499"
ORIGIN      
        1 mnkrawivfl desgvsllpq vrrtyaprgr tpllrhrlnw krasmaaalg yhaaepgrgp
       61 rlcfhlkpgs ydtialievl eqlkvfyrge qvvliwdgls ahwsramraw aaeqdwltle
      121 rlpayapeln pvellwsslk krelanlagd hladvadate qgihrinhnr qlpwsfltht
      181 gltihpptpq n
//
LOCUS       WP_258018174             184 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Streptomyces
            noursei].
ACCESSION   WP_258018174
VERSION     WP_258018174.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 184)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..184
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=19665
     Region          <24..184
                     /region_name="GalE"
                     /note="UDP-glucose 4-epimerase [Cell
                     wall/membrane/envelope biogenesis]; COG1087"
                     /db_xref="CDD:440704"
ORIGIN      
        1 msyllatary cfhllthrst alrspdartk avceemfadi avagprvlsl ryfnpigadp
       61 klrtglqlkr pshalgvliq ahqegrsfpi tgtnyptrdg sgirdyvhvw dlaaahiaai
      121 erfdsiltgs mrsiainlgt gsgttvrelc aafnnvvstp latidaaprp gdvvggytks
      181 draa
//
LOCUS       WP_258018198             513 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: amino acid permease [Streptomyces].
ACCESSION   WP_258018198
VERSION     WP_258018198.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..513
                     /product="amino acid permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=54041
     Region          42..496
                     /region_name="2A0306"
                     /note="amino acid transporter; TIGR00909"
                     /db_xref="CDD:129987"
ORIGIN      
        1 mstqhgpqgh gpgggtrrdr gvlrtksieq siqdteepeh alkkslsald ltvfgvgvvi
       61 gtgifvltgk iakeqagpav alsfvvagvv calaalcyae fastvpvags aytfsyaslg
      121 elpawiigwd lilelalgca vvavgwsgyv rslldtgglh lpsmlsgshg gqfgfdllac
      181 vlvlvitgil vlgmklssrv ttvvvgvkvt vvllviiaga ffisganydp fippsrpstt
      241 gggltaplsq lmfgfapsdf gvmgifaaaa vvffafigfd ivataaeetr vpqrdvprgi
      301 lgslaictll yvavsvvvtg mekydqlsvd apladafkhv ghpfyaglis fgaavgltsv
      361 cmilllgqsr vffamsrdgl lpqlfsrvhp kfgtphrsti vlggvvavva gftsidvlae
      421 lvnigtlfaf vvvaigvvll rrdrpdlpra frtpfvpfvp llsvlaslwl mlnlpaetwi
      481 rfaiwmalgf avyfvygrth srlavrqrqr dsa
//
LOCUS       WP_258017820             367 aa            linear   BCT 02-MAR-2025
DEFINITION  DMT family transporter [Streptomyces noursei].
ACCESSION   WP_258017820
VERSION     WP_258017820.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 367)
  AUTHORS   Goytain,A., Hines,R.M. and Quamme,G.A.
  TITLE     Functional characterization of NIPA2, a selective Mg2+ transporter
  JOURNAL   Am J Physiol Cell Physiol 295 (4), C944-C953 (2008)
   PUBMED   18667602
REFERENCE   2  (residues 1 to 367)
  AUTHORS   Goytain,A., Hines,R.M., El-Husseini,A. and Quamme,G.A.
  TITLE     NIPA1(SPG6), the basis for autosomal dominant form of hereditary
            spastic paraplegia, encodes a functional Mg2+ transporter
  JOURNAL   J Biol Chem 282 (11), 8060-8068 (2007)
   PUBMED   17166836
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017468.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05653.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..367
                     /product="DMT family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0015693 - magnesium ion transport
                     [Evidence IEA]"
                     /calculated_mol_wt=38318
     Region          5..>74
                     /region_name="EamA"
                     /note="EamA-like transporter family; cl23754"
                     /db_xref="CDD:474045"
     Region          <289..>344
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
ORIGIN      
        1 mlwwgvasal lanvlystgf vlekralatl palstrrpar lirhllsspl wlggslalaa
       61 gfaaqlavyr tlpiaaaqgi fisglvllll mssallgert sgrerqgiaa ilvalvlvva
      121 slrnddarai artappatll tialpslaag lllyrsaelr arrrhrrpta gvpygvavgl
      181 lygvsslaik gvsglldfhd lraaalavlr spypylllvt gatglvlsqt alqrcrasvi
      241 vpvcttvtcv ftvacgtvaf geplpddplr lalrlggtal altvllalpr heapppphrd
      301 aptprqhhpp alprretpap sapgaplape paattappst apeaattahr tpqpplttsn
      361 vttrrrd
//
LOCUS       WP_258018387             285 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein
            [Streptomyces noursei].
ACCESSION   WP_258018387
VERSION     WP_258018387.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 285)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..285
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=31045
     Region          33..254
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mttritrtaa llalatltat acgtnqppsl ftkgqvsvgv ksdqpgtsyl dgydfngfdi
       61 tvarqllkkl gtepnfaavp serrttavte grqdlviatf sitdersakv dfvgpyattp
      121 qgvmvrkddh rinnlsdlrg ksvcawsgtt sgtalqkipg lvfsgkttad gcvralenhq
      181 vdavstdtvi lygfaqskqy pnlkvvpgid idstnrygia mqkghredcy klrdalrdyl
      241 nssdwkrdfs telpvvpead ahweahykpn addldkyscr dksap
//
LOCUS       WP_258018144             206 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6230 family protein [Streptomyces noursei].
ACCESSION   WP_258018144
VERSION     WP_258018144.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 206)
  AUTHORS   Feng,Z., Ogasawara,Y., Nomura,S. and Dairi,T.
  TITLE     Biosynthetic Gene Cluster of a d-Tryptophan-Containing Lasso
            Peptide, MS-271
  JOURNAL   Chembiochem 19 (19), 2045-2048 (2018)
   PUBMED   29974638
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039694.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19741.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..206
                     /product="DUF6230 family protein"
                     /calculated_mol_wt=20646
     Region          49..206
                     /region_name="DUF6230"
                     /note="Family of unknown function (DUF6230); pfam19741"
                     /db_xref="CDD:466168"
ORIGIN      
        1 maastrelsp egrthwkrta vmlvpstvcv galvlalaqg amaasfavsg knfkvsadei
       61 tgqgiasfps slggsdgtgh avllagirtg takgvclsmk qrlplvgevs llvrsggdrp
      121 vrgenivvda daltssggrv tgvqagrdaa tltgapgvdg prglfgvqat salarnvkst
      181 awasnggslt ldkveielsh sgkecy
//
LOCUS       WP_258018451             518 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaB-like helicase N-terminal domain-containing protein
            [Streptomyces noursei].
ACCESSION   WP_258018451
VERSION     WP_258018451.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces noursei
  ORGANISM  Streptomyces noursei
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 518)
  AUTHORS   Fass,D., Bogden,C.E. and Berger,J.M.
  TITLE     Crystal structure of the N-terminal domain of the DnaB hexameric
            helicase
  JOURNAL   Structure 7 (6), 691-698 (1999)
   PUBMED   10404598
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012974.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00772.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Streptomyces noursei"
                     /db_xref="taxon:1971"
     Protein         1..518
                     /product="DnaB-like helicase N-terminal domain-containing
                     protein"
                     /GO_function="GO:0003678 - DNA helicase activity [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /calculated_mol_wt=54591
     Region          40..>183
                     /region_name="DnaB"
                     /note="Replicative DNA helicase [Replication,
                     recombination and repair]; COG0305"
                     /db_xref="CDD:440074"
     Region          217..512
                     /region_name="RepA"
                     /note="RecA-family ATPase [Replication, recombination and
                     repair]; COG3598"
                     /db_xref="CDD:442817"
ORIGIN      
        1 mskptgigpa nttpltshlp hpmapdpgpg tpvpmqhdad aemavlgscm yqsavidavr
       61 qvlepgdfyq pahttiwhal lqlrkdgapt daialshqlk stgdltrvgg ppylhtlasa
      121 asvgsgaeyy adivrhhadl ralqatavrv lqgatapgad paevrgllta slseaadrar
      181 rssggrlqry atdgwsfvtd tpastapvwg tpgktawasg eslmlvgppg vgkstiaqqi
      241 vlarlgllaq vldmpvqqge kvlyiaadrp sqlaraftrv vdqahqdilr qrlvfwsgpl
      301 paslntepql ltelatehga dtvvidslkd vvgkltddea glaynnarqq llrdgielle
      361 lhhqrkqgpd asrnqrpvld qvygsawfta gagsvlflng aagdpvvqlh hlktvddeig
      421 plpvihdhpr gtsrvdtsld pltllrqagt hgltarqlat qttgeanprp adlakarrrl
      481 ealtksghav qetgagggag ggqatrwtaa trhisavs
//
LOCUS       WP_258018503             179 aa            linear   BCT 02-MAR-2025
DEFINITION  type I restriction endonuclease, partial [Brachyspira pilosicoli].
ACCESSION   WP_258018503
VERSION     WP_258018503.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira pilosicoli
  ORGANISM  Brachyspira pilosicoli
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 179)
  AUTHORS   Piekarowicz,A., Klyz,A., Kwiatek,A. and Stein,D.C.
  TITLE     Analysis of type I restriction modification systems in the
            Neisseriaceae: genetic organization and properties of the gene
            products
  JOURNAL   Mol Microbiol 41 (5), 1199-1210 (2001)
   PUBMED   11555298
REFERENCE   2  (residues 1 to 179)
  AUTHORS   Makovets,S., Doronina,V.A. and Murray,N.E.
  TITLE     Regulation of endonuclease activity by proteolysis prevents
            breakage of unmodified bacterial chromosomes by type I restriction
            enzymes
  JOURNAL   Proc Natl Acad Sci U S A 96 (17), 9757-9762 (1999)
   PUBMED   10449767
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016220.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04313.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Brachyspira pilosicoli"
                     /db_xref="taxon:52584"
     Protein         1..>179
                     /product="type I restriction endonuclease"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
     Region          34..>179
                     /region_name="HsdR_N"
                     /note="N-terminal domain of HsdR motor subunit of type I
                     restriction-modification enzyme EcoR124I and similar
                     systems; cd22332"
                     /db_xref="CDD:411736"
ORIGIN      
        1 mqnkekmdii kmseestvva kytpiqrnrt kyqseaelee efikqlteqg yeyvniknen
       61 dliknlrtql eklndynftd newnnlfnsi ivngnektvd ktykmheeri fsldldngep
      121 knifiidadn iyhnhlqvin qytethserk arydvtilin gfpmvhielk rrgvnirea
//
LOCUS       WP_258018559             549 aa            linear   BCT 02-MAR-2025
DEFINITION  PTS transporter subunit EIIC [Brachyspira pilosicoli].
ACCESSION   WP_258018559
VERSION     WP_258018559.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira pilosicoli
  ORGANISM  Brachyspira pilosicoli
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 549)
  AUTHORS   Reizer,J., Paulsen,I.T., Reizer,A., Titgemeyer,F. and Saier,M.H.
            Jr.
  TITLE     Novel phosphotransferase system genes revealed by bacterial genome
            analysis: the complete complement of pts genes in mycoplasma
            genitalium
  JOURNAL   Microb Comp Genomics 1 (3), 151-164 (1996)
   PUBMED   9689210
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02378.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Brachyspira pilosicoli"
                     /db_xref="taxon:52584"
     Protein         1..549
                     /product="PTS transporter subunit EIIC"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /calculated_mol_wt=59554
     Region          3..542
                     /region_name="PTS-II-BC-glcB"
                     /note="PTS system, glucose-specific IIBC component;
                     TIGR02002"
                     /db_xref="CDD:273923"
ORIGIN      
        1 mmknsfallq kigrsfmlpi ailpmagill gvggaftspt lietynltfl ktgtplnyil
       61 vllfnagnfv fanlpllfav giaigmanks ketaalsavv gfllfhtvig vilrfqghtp
      121 dnttvdalma agmsageaag taalyarelg iftlqtgvfg giicgllsaf itnkfanqtl
      181 pdylaffsgn rfvavltmvf fiplaaifpf iwpsifgviv kagelfaatg yigtffygfa
      241 mrilnvfglh haiyplfwyt elggvlevgg qlvaggqrif faqladptvt hfsaaatrtm
      301 tggflpmmfg lpaaalamyh vaddenktka kgillsaalt sfltgitepl eftflfiapp
      361 lyvvhaileg laymlmymln vavgitfsrg lidftffgll qgisktsyqw ililgpvyav
      421 vyyfifrfli ikfnfatpgr sgsevklyrr adyneregtk tneaisnddd siidsiveal
      481 ggienidnid acitrlrvtv kdpskvasdd vwtslnskkv lragngiqai ygtqaevykn
      541 kiiqkynik
//
LOCUS       WP_258018611             967 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Brachyspira
            pilosicoli].
ACCESSION   WP_258018611
VERSION     WP_258018611.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira pilosicoli
  ORGANISM  Brachyspira pilosicoli
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 967)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..967
                     /organism="Brachyspira pilosicoli"
                     /db_xref="taxon:52584"
     Protein         <1..967
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          83..221
                     /region_name="HK_sensor"
                     /note="Sensor domains of Histidine Kinase receptors;
                     cl38916"
                     /db_xref="CDD:365792"
     Region          464..754
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(494..495,498..499,502,505..506,508..509,512,
                     515..516,519,522..523,526..527,530,533..534,536..537,541,
                     543..544,547,550..551,554..555,559,561,564..565,568,572,
                     575,582,586,589,592..593,596,599..600,603..604,606..607,
                     610..611,621..622,625,628..629,632,635..636,638,639,642,
                     645..646,649,652..653,655..656,659..660,662..663,666,
                     669..670,673,676..677)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            564..597
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Region          <738..813
                     /region_name="MgtE_N"
                     /note="MgtE intracellular N domain; cl23799"
                     /db_xref="CDD:451552"
ORIGIN      
        1 flymslknkv lfsvilvval slsptifins rtnrkalydn amtvtqnyfy divstfnniy
       61 attsvgtvsl sdiatvayel ydvgnienpq rslrdiiyrf hksqlnlhhv iangiyfepn
      121 iisentnlkn lyslylydvp dagtmepqfg timdnyinee fyalalpnnw nreakrpqdv
      181 yysspymknl dkpqkvisfs spiystdntk ligvslsdvs ldiahevltn ivktgpfnti
      241 iydtrnnkiv yhdnpkyils nvndfpwfna ainnldistn iiiknkvmid dvpyhifvrq
      301 fksglynlfm fvpssyfssv ldqtnntifv ilifaiivii iilsitipis lkpldkishe
      361 leegvfnnnm finitkinsk dslgylsswi iiffdmvqhv fstvsktllv fkaqitslkn
      421 ktsdiskvag smtesvnliv dnisyqqnef kavessnlei ykiiasnlse lvsidqmtnd
      481 lqikideqai slnqinsltl siqkdmeevs esvakakdes evmlslsnds rdkilkteni
      541 trnlvssirg isefvnstid isqqtnmlam naaieaahag eqgkgfavva eeirklattt
      601 nvqsekahri lreiekemnl miekmaermn iienmiskvn nfvdtmtkvk kvvddkyist
      661 kdmniaierl tnaikdikeq ytalhgrisv akddlvnlsd fskkndeamk lvskntddiv
      721 tktqdmsari ndvfnlikei ealsnisgds idtldremss yvikdfeevi aekiknindg
      781 drayakytlv krfykfmidt fgkektiali akmpedakii ysdvkkvkfk kkfvlsssff
      841 mpiniimnef ydgseegird vakygfrkcn vlnklkikfy rgrnladlli kfsnkrfkni
      901 nidvvksekr kviyhlyyfp nydsmmeiyf delinnifry rypnsakvti sksisngyiy
      961 teyivtw
//
LOCUS       WP_258018666              69 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase large subunit domain-containing protein, partial
            [Brachyspira hampsonii].
ACCESSION   WP_258018666
VERSION     WP_258018666.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira hampsonii
  ORGANISM  Brachyspira hampsonii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 69)
  AUTHORS   Xu,R.G., Jenkins,H.T., Chechik,M., Blagova,E.V., Lopatina,A.,
            Klimuk,E., Minakhin,L., Severinov,K., Greive,S.J. and Antson,A.A.
  TITLE     Viral genome packaging terminase cleaves DNA using the canonical
            RuvC-like two-metal catalysis mechanism
  JOURNAL   Nucleic Acids Res 45 (6), 3580-3590 (2017)
   PUBMED   28100693
REFERENCE   2  (residues 1 to 69)
  AUTHORS   Hilbert,B.J., Hayes,J.A., Stone,N.P., Duffy,C.M., Sankaran,B. and
            Kelch,B.A.
  TITLE     Structure and mechanism of the ATPase that powers viral genome
            packaging
  JOURNAL   Proc Natl Acad Sci U S A 112 (29), E3792-E3799 (2015)
   PUBMED   26150523
REFERENCE   3  (residues 1 to 69)
  AUTHORS   Schouler,C., Ehrlich,S.D. and Chopin,M.C.
  TITLE     Sequence and organization of the lactococcal prolate-headed bIL67
            phage genome
  JOURNAL   Microbiology (Reading) 140 (Pt 11), 3061-3069 (1994)
   PUBMED   7812447
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015321.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03354.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Brachyspira hampsonii"
                     /db_xref="taxon:1287055"
     Protein         <1..>69
                     /product="terminase large subunit domain-containing
                     protein"
     Region          <5..>69
                     /region_name="YmfN"
                     /note="Phage terminase-like protein, large subunit,
                     contains N-terminal HTH domain [Mobilome: prophages,
                     transposons]; COG4626"
                     /db_xref="CDD:443665"
ORIGIN      
        1 eaitykqtst itkkkdtask skplgqdsnt edglnphlvi vdeyhahpdn ellnvlesgm
       61 garrqplvf
//
LOCUS       WP_258018771             123 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Brachyspira
            hampsonii].
ACCESSION   WP_258018771
VERSION     WP_258018771.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira hampsonii
  ORGANISM  Brachyspira hampsonii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 123)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Brachyspira hampsonii"
                     /db_xref="taxon:1287055"
     Protein         <1..123
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..123
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
ORIGIN      
        1 gfavvasevr nlaqttqssv kditdlvdna ydkinkatgt arqsqeifkd lktkidetan
       61 imrgissaav eqqsgveqvn kavsemdgat qmnnalvnda enaskdlvvq anslqhamkf
      121 fkl
//
LOCUS       WP_258018782             150 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Brachyspira
            hampsonii].
ACCESSION   WP_258018782
VERSION     WP_258018782.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira hampsonii
  ORGANISM  Brachyspira hampsonii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 150)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Brachyspira hampsonii"
                     /db_xref="taxon:1287055"
     Protein         <1..150
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..150
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            7..40
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 iediafqtni lalnaaveaa ragdmgkgfa vvasevrnla qttqssvkdi thlvdnaydk
       61 inkatesara sqdifnelqe kientakimr disstaveqh egveqvnrav tdmdtvtqqn
      121 aalveeasas anallnqaee lvnamsffkv
//
LOCUS       WP_258018808             128 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Brachyspira
            hampsonii].
ACCESSION   WP_258018808
VERSION     WP_258018808.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira hampsonii
  ORGANISM  Brachyspira hampsonii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 128)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Brachyspira hampsonii"
                     /db_xref="taxon:1287055"
     Protein         <1..128
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..127
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
ORIGIN      
        1 dqgkgfavva sevrnlaqns qssakditsl ieniyekink saetaresqs ifndiqskid
       61 gtakimqeis ttaveqqtgv dqvniavski dgitqqnaal vdetatyake lleqsenlkn
      121 imtffkmn
//
LOCUS       WP_258018820              71 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Brachyspira
            hampsonii].
ACCESSION   WP_258018820
VERSION     WP_258018820.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira hampsonii
  ORGANISM  Brachyspira hampsonii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 71)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Brachyspira hampsonii"
                     /db_xref="taxon:1287055"
     Protein         <1..>71
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..>71
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
ORIGIN      
        1 meemastiks stshsiegnn mmkesmnsir nagsiilett ksieevneds ekiknitkvi
       61 ediafqtnil a
//
LOCUS       WP_258018916             354 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase [Yersinia kristensenii].
ACCESSION   WP_258018916
VERSION     WP_258018916.1
KEYWORDS    RefSeq.
SOURCE      Yersinia kristensenii
  ORGANISM  Yersinia kristensenii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 354)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 354)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Yersinia kristensenii"
                     /db_xref="taxon:28152"
     Protein         1..354
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=39057
     Region          27..337
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     Site            order(32..34,64,69,95,153,196..197,218,246..252,292,
                     309..312,317,320..321)
                     /site_type="active"
                     /db_xref="CDD:381296"
     Site            order(64,69,95,153)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381296"
ORIGIN      
        1 mslknislkn iglennrplg ktgfhlpvig vgtcplgely eeiaeqdaqa tletawdngi
       61 rlydtapwyg rgqgehrtgr flyrknrddy vlstkvgrrl laprarktfq tapwqgglaf
      121 nhvhdytydg ilrsyedslq rlginkvdil yihdldtgyf hdeqdllskl kelesggfra
      181 leelkaagei aafgaginep gminrfldry pldvflvasr ytlleqeiya dellraqqqg
      241 agiviggvfn sgvlatgiqd garydygklp lsvadrvrkl qavaaefavp laaaalqfpl
      301 gfsavasvly gpsrwaevtq nsvnfqhpip tefwlalraq gliaehiplp glpa
//
LOCUS       WP_258018918             152 aa            linear   BCT 02-MAR-2025
DEFINITION  HipA domain-containing protein [Yersinia kristensenii].
ACCESSION   WP_258018918
VERSION     WP_258018918.1
KEYWORDS    RefSeq.
SOURCE      Yersinia kristensenii
  ORGANISM  Yersinia kristensenii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 152)
  AUTHORS   Black,D.S., Irwin,B. and Moyed,H.S.
  TITLE     Autoregulation of hip, an operon that affects lethality due to
            inhibition of peptidoglycan or DNA synthesis
  JOURNAL   J Bacteriol 176 (13), 4081-4091 (1994)
   PUBMED   8021189
REFERENCE   2  (residues 1 to 152)
  AUTHORS   Black,D.S., Kelly,A.J., Mardis,M.J. and Moyed,H.S.
  TITLE     Structure and organization of hip, an operon that affects lethality
            due to inhibition of peptidoglycan or DNA synthesis
  JOURNAL   J Bacteriol 173 (18), 5732-5739 (1991)
   PUBMED   1715862
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019421.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07804.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Yersinia kristensenii"
                     /db_xref="taxon:28152"
     Protein         1..152
                     /product="HipA domain-containing protein"
                     /calculated_mol_wt=17468
     Region          <63..110
                     /region_name="HipA"
                     /note="Serine/threonine protein kinase HipA, toxin
                     component of the HipAB toxin-antitoxin module [Signal
                     transduction mechanisms]; COG3550"
                     /db_xref="CDD:442771"
ORIGIN      
        1 miladyrykv ftyhlskkll flsnilhrlv fflieiirtl aqkltsqyrv tdlgqsinve
       61 dlviemiqrd llniafgnsd nhgrntalik rpeaiwlspl ydfvpmkadp egivrvtqwg
      121 spyeeggnfn wqaiitelsd ladpnhvfla fq
//
LOCUS       WP_258018988             130 aa            linear   BCT 02-MAR-2025
DEFINITION  type II secretion system protein N [Yersinia kristensenii].
ACCESSION   WP_258018988
VERSION     WP_258018988.1
KEYWORDS    RefSeq.
SOURCE      Yersinia kristensenii
  ORGANISM  Yersinia kristensenii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 130)
  AUTHORS   Korotkov,K.V., Johnson,T.L., Jobling,M.G., Pruneda,J., Pardon,E.,
            Heroux,A., Turley,S., Steyaert,J., Holmes,R.K., Sandkvist,M. and
            Hol,W.G.
  TITLE     Structural and functional studies on the interaction of GspC and
            GspD in the type II secretion system
  JOURNAL   PLoS Pathog 7 (9), e1002228 (2011)
   PUBMED   21931548
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022800.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11356.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Yersinia kristensenii"
                     /db_xref="taxon:28152"
     Protein         1..130
                     /product="type II secretion system protein N"
                     /calculated_mol_wt=14910
     Region          70..>127
                     /region_name="PulC"
                     /note="Type II secretory pathway, component PulC
                     [Intracellular trafficking, secretion, and vesicular
                     transport]; COG3031"
                     /db_xref="CDD:442267"
ORIGIN      
        1 mvmggskrtv pllyegewdn gedinlinkt kmveeiknti ffkrkykedd keiiiefeni
       61 snsprytgtl klvgvlehtd kansiailef krkqnlyleg dkidaitiik ilkdriivne
      121 nggyytlvil
//
LOCUS       WP_258018955            1280 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Yersinia kristensenii].
ACCESSION   WP_258018955
VERSION     WP_258018955.1
KEYWORDS    RefSeq.
SOURCE      Yersinia kristensenii
  ORGANISM  Yersinia kristensenii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 1280)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 1280)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 1280)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 1280)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1280
                     /organism="Yersinia kristensenii"
                     /db_xref="taxon:28152"
     Protein         1..1280
                     /product="ATP-binding protein"
                     /calculated_mol_wt=142749
     Region          109..1105
                     /region_name="PRK09959"
                     /note="acid-sensing system histidine kinase EvgS"
                     /db_xref="CDD:182169"
ORIGIN      
        1 mhipiiwyss aksnllrtal slyrcfrlri llccllllsg qlyaapiasr qgcdtgqplt
       61 ihsiansyse dlllppstda rqssrrtvkv gvvidantpf vvnrddtaie givadylkii
      121 sdasqlsfqm igycdyglvl nalengqvdl magtpmpaqp gliashafft nrhvevrskn
      181 wdptkrthpe tvaivnnepl speflfnyha dkivaypnql qgllavaygn advfvanats
      241 anylidqlql ltlqirnfap yhpapytfla leknqklidy inqilellps ratgdiqqrw
      301 fgskhhynid aklllteqev twiqdhpvvt yvapqdlapl ifrdrqtgem agfsvdlidi
      361 isrrtgikfk pvytkdtges mrdfiagkid mlpivavrng qygnnlyslp vaqslwgilt
      421 redrtdinnv adlagkrvgi qagstsggii sntllaqkit fvdapdtmtl vrwlqqgkvd
      481 aiiknmmtan ylsaqnftpn iktvavtgee plmmafaisp qlpelkaiid kviesippee
      541 ldnlisewst fkpkpttfde hslenewlml alkissglll ifglylcylv fnkrrqakll
      601 qtrlrqqesi inalpfavfi rtkkgelavy nnhfaaahqd klndmlnqkt eqarwpmtsp
      661 ldreidkycr yvlrdrqpqm vdlsleinne lrdiflwiip ldnaersllg gwldisqrkt
      721 vereleaarv eaesanrtks tflatishel rtpmyaimgl leleirsdqp vdkntlvtvs
      781 ksaqslmlll ddiidsakie agqlsvhpav vdfrqeierm ftiyqpiade rnlrfsgwld
      841 dhipdlvmvd mlrvrqvmgn llgnalkfte qggvsvditw esidekhgim niditdtgig
      901 ispaaqatlf qpfsqanegk sprfggsglg lwichqlihk mggqitlesq lgkgtslfit
      961 lpleiatasd lppdsiivdv detqlnqlkn lrilvvddlp anrqllqqql afigieqvmt
     1021 aengaeawqi lqhysfdavi tdynmplmng yelathirns atmkdmviig ctadareesa
     1081 arcndagmnd cmvkpvtidt lrttllrqei igsyvdtpgv nevtaqnrsq eeiisgetes
     1141 livtqplptl vaaqnklksl sggnaevelq llqfllesnv hdtavlaqly trlsnddddt
     1201 tsadiykema slvhrikggv qlidaqtlvd scikfesllh eqdrnavlth gidylallae
     1261 tnqllvklia syskidstsp
//
LOCUS       WP_258019042              58 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Brachyspira pilosicoli].
ACCESSION   WP_258019042
VERSION     WP_258019042.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira pilosicoli
  ORGANISM  Brachyspira pilosicoli
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 58)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 58)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 58)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 58)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..58
                     /organism="Brachyspira pilosicoli"
                     /db_xref="taxon:52584"
     Protein         <1..58
                     /product="ATP-binding protein"
     Region          <1..56
                     /region_name="NtrY"
                     /note="Signal transduction histidine kinase NtrY involved
                     in nitrogen fixation and metabolism regulation [Signal
                     transduction mechanisms]; COG5000"
                     /db_xref="CDD:444024"
ORIGIN      
        1 giekkdlrri fepyftskdk gtgiglaive kiisehngri dvdsiigegt tffirfev
//
LOCUS       WP_258019047             850 aa            linear   BCT 02-MAR-2025
DEFINITION  Eco57I restriction-modification methylase domain-containing
            protein, partial [Brachyspira pilosicoli].
ACCESSION   WP_258019047
VERSION     WP_258019047.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira pilosicoli
  ORGANISM  Brachyspira pilosicoli
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 850)
  AUTHORS   Schluckebier,G., Kozak,M., Bleimling,N., Weinhold,E. and Saenger,W.
  TITLE     Differential binding of S-adenosylmethionine S-adenosylhomocysteine
            and Sinefungin to the adenine-specific DNA methyltransferase M.TaqI
  JOURNAL   J Mol Biol 265 (1), 56-67 (1997)
   PUBMED   8995524
REFERENCE   2  (residues 1 to 850)
  AUTHORS   Janulaitis,A., Vaisvila,R., Timinskas,A., Klimasauskas,S. and
            Butkus,V.
  TITLE     Cloning and sequence analysis of the genes coding for Eco57I type
            IV restriction-modification enzymes
  JOURNAL   Nucleic Acids Res 20 (22), 6051-6056 (1992)
   PUBMED   1334261
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019291.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07669.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Brachyspira pilosicoli"
                     /db_xref="taxon:52584"
     Protein         <1..850
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
     Region          <1..265
                     /region_name="COG2810"
                     /note="Predicted type IV restriction endonuclease [Defense
                     mechanisms]"
                     /db_xref="CDD:442059"
     Region          59..>502
                     /region_name="YeeA"
                     /note="Type II restriction/modification system,
                     endonuclease and methylase domains [Defense mechanisms];
                     COG1002"
                     /db_xref="CDD:440626"
     Region          <711..>761
                     /region_name="TaqI_C"
                     /note="TaqI-like C-terminal specificity domain; pfam12950"
                     /db_xref="CDD:403989"
ORIGIN      
        1 rvffveakdt kvdikndsrp afqlrsyaws aklgvsiltd feefavydct vrpkendrte
       61 aarikyftye dylkegvfdy iydlferenv angsldayse nlcnrkgset vdvhflstld
      121 elrtklavvi sklnremsek dinyavqqii driiflrvae drnvenygll alanpknkne
      181 ddfknygfng ensyyenlny ifdranekyn sglfdedaiv rnlniddkti kdiidelytp
      241 knpyqfsvip veiignayeq flgktisidk nhkavielkp evrkaggvyy tpeyivdyiv
      301 antvgeaikg ktpdeivnik ildpacgsgs fllgaykyll nyhkeyflkn ktkkymgsry
      361 eiidesgnla lwvrkqilin nifgvdidsn avevaklsll lksfedsfnv neygqgslln
      421 ekilpsldnn ikcgnslign dfyesqsmla fdektrdkmn cfdweeefks ifkvggfdvv
      481 ignppygael seternylek kfclsntnta alflgvlknf lkdncrggyi ipksfiyasn
      541 wessrdlmid dlfelvdcgk vwkevkleqv itlfekglkn dsyitsiree keikrigdin
      601 kntykefgfy lnavsndeln iaykmrnsgl ylndlivnrr gagyqklcid evsnkekyyk
      661 vlggkniary lfpnnskkyl lkedviddka iiqdnsilvq niisytdipe psiiirgips
      721 dlinkneyli ldtinqlsnk snlsiyyilg llnskliswy ifrfiygkai mtmhfdsvvt
      781 akipipyidl ndknkmdnyn kiielvktri tletrlnnen npntiniikr qingiensie
      841 kiinylydli
//
LOCUS       WP_258019058             536 aa            linear   BCT 02-MAR-2025
DEFINITION  portal protein [Yersinia kristensenii].
ACCESSION   WP_258019058
VERSION     WP_258019058.1
KEYWORDS    RefSeq.
SOURCE      Yersinia kristensenii
  ORGANISM  Yersinia kristensenii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 536)
  AUTHORS   Nakasu,S., Fujisawa,H. and Minagawa,T.
  TITLE     Purification of characterization of gene 8 product of bacteriophage
            T3
  JOURNAL   Virology 143 (2), 422-434 (1985)
   PUBMED   3904172
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023657.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12236.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Yersinia kristensenii"
                     /db_xref="taxon:28152"
     Protein         1..536
                     /product="portal protein"
                     /calculated_mol_wt=60347
     Region          13..492
                     /region_name="Head-tail_con"
                     /note="Bacteriophage head to tail connecting protein;
                     cl19541"
                     /db_xref="CDD:450324"
ORIGIN      
        1 mearaqqlik qgdhlfgkks pilnlwqeia eqfyperadf tvcrslgtef adhlmtsypv
       61 marrdlgnsf asmlrrdkwf nlntgdddsn dhsakvwlew ardvqfkamy drrtqfvrat
      121 keadhdyaaf gqcaisveln knadgllyrc whlrdlawae nsegiidtvh rkwkptardl
      181 tatfgdkvha kvnaslekep yrefecrhiv vpseeygdkn aapyvsvyid venqhvmeev
      241 pifhrmyvip rwqtvagsqy ayspatival pdarliqsis rvlleageka vdppmvasre
      301 vfrddfnlma ggitwadiem dtdirnviae fgkntslpag inirddvrem isqafyldkl
      361 tlpsvremta yevsqrvqey irqalpifap ieyeysgdlc emsfdilmrg gafgspmdip
      421 eslrgqevkf tfqsplqdai gkekqgllqn aaqmlgvaaq idptvvadvd irvafrdamd
      481 gfgvpakwmr seddanqliq qqaqqeqaqa avddvqqgas vmqnvaaaaq aaeaig
//
LOCUS       WP_258019106             132 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Brachyspira
            pilosicoli].
ACCESSION   WP_258019106
VERSION     WP_258019106.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira pilosicoli
  ORGANISM  Brachyspira pilosicoli
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 132)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Brachyspira pilosicoli"
                     /db_xref="taxon:52584"
     Protein         <1..132
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..132
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
ORIGIN      
        1 ageqgrgfav vasevrnlaq naqesvknit dlitdstnki nlatrsvkes kemfddisqk
       61 mddasaimek iniaaqeqgr gisqvniait qmdtsvqqna alveeatsas qsllneaedl
      121 ikaieyfklk ee
//
LOCUS       WP_258019164             105 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Yersinia kristensenii].
ACCESSION   WP_258019164
VERSION     WP_258019164.1
KEYWORDS    RefSeq.
SOURCE      Yersinia kristensenii
  ORGANISM  Yersinia kristensenii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 105)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 105)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Yersinia kristensenii"
                     /db_xref="taxon:28152"
     Protein         1..>105
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          6..>105
                     /region_name="VgrG"
                     /note="Uncharacterized conserved protein VgrG, implicated
                     in type VI secretion and phage assembly [Intracellular
                     trafficking, secretion, and vesicular transport, Mobilome:
                     prophages, transposons, General function prediction only];
                     COG3501"
                     /db_xref="CDD:442724"
ORIGIN      
        1 mangfplfnn qsryvleind stvtadvlrl rgrealntpf swmiefttaq tniapeqvll
       61 kfatlrmrng kmvhgiltrl ewlstsadqs hyrvrlesrl allsr
//
LOCUS       WP_258019205             247 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding protein [Brachyspira pilosicoli].
ACCESSION   WP_258019205
VERSION     WP_258019205.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira pilosicoli
  ORGANISM  Brachyspira pilosicoli
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 247)
  AUTHORS   Roberts,D.L., Frerman,F.E. and Kim,J.J.
  TITLE     Three-dimensional structure of human electron transfer flavoprotein
            to 2.1-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 93 (25), 14355-14360 (1996)
   PUBMED   8962055
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012968.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00766.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Brachyspira pilosicoli"
                     /db_xref="taxon:52584"
     Protein         1..247
                     /product="FAD-binding protein"
                     /calculated_mol_wt=26188
     Region          <48..168
                     /region_name="FixB"
                     /note="Electron transfer flavoprotein, alpha subunit FixB
                     [Energy production and conversion]; COG2025"
                     /db_xref="CDD:441628"
     Region          196..246
                     /region_name="NorV"
                     /note="Flavorubredoxin [Inorganic ion transport and
                     metabolism]; COG1773"
                     /db_xref="CDD:441379"
ORIGIN      
        1 makkgpitge rrniifkdgs aqdkvnalva alqkdgidfs vgidintpiv daervvsagk
       61 giggkenmkl venlakaaga aigcsrpvae elrylpinry vgmsgqkfng nlyiacgisg
      121 anqhlkgikn asiivainmk asakifknad ygivgdvtei lplltaalgg daakkpaevp
      181 ykkikrivpk kvmempkiyv csgcgyeynp fvgdpeaeia pgtdftalpe ewvcpecsee
      241 kanfika
//
LOCUS       WP_258019210             157 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Brachyspira
            pilosicoli].
ACCESSION   WP_258019210
VERSION     WP_258019210.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira pilosicoli
  ORGANISM  Brachyspira pilosicoli
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 157)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 157)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 157)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Brachyspira pilosicoli"
                     /db_xref="taxon:52584"
     Protein         1..157
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=17254
     Region          3..>154
                     /region_name="MglA"
                     /note="ABC-type sugar transport system, ATPase component
                     [Carbohydrate transport and metabolism]; COG1129"
                     /db_xref="CDD:440745"
ORIGIN      
        1 mtdniilkmt giekrfkgvy alknfnfslv kgeilalige ngagkstlmk ilsgiykkds
       61 gtieyfgkpl evpgpkeaee mgisivhqel nlmnhltvaq niyighepln kfgliddklm
      121 irragkifkg mnvdidpsak igsltvgkqq lveiekh
//
LOCUS       WP_258019243              70 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Brachyspira pilosicoli].
ACCESSION   WP_258019243
VERSION     WP_258019243.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira pilosicoli
  ORGANISM  Brachyspira pilosicoli
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 70)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Brachyspira pilosicoli"
                     /db_xref="taxon:52584"
     Protein         1..70
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=8004
     Region          <2..70
                     /region_name="AbgB"
                     /note="Metal-dependent
                     amidase/aminoacylase/carboxypeptidase [General function
                     prediction only]; COG1473"
                     /db_xref="CDD:441082"
ORIGIN      
        1 mgfkklapft psmggedfae yqqkipgvfi ffstmtekni phhnskfeid esklykpvil
       61 msewaikhlk
//
LOCUS       WP_258019073             481 aa            linear   BCT 02-MAR-2025
DEFINITION  CsgG/HfaB family protein, partial [Brachyspira pilosicoli].
ACCESSION   WP_258019073
VERSION     WP_258019073.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira pilosicoli
  ORGANISM  Brachyspira pilosicoli
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 481)
  AUTHORS   Loferer,H., Hammar,M. and Normark,S.
  TITLE     Availability of the fibre subunit CsgA and the nucleator protein
            CsgB during assembly of fibronectin-binding curli is limited by the
            intracellular concentration of the novel lipoprotein CsgG
  JOURNAL   Mol Microbiol 26 (1), 11-23 (1997)
   PUBMED   9383186
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03783.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Brachyspira pilosicoli"
                     /db_xref="taxon:52584"
     Protein         <1..481
                     /product="CsgG/HfaB family protein"
                     /GO_component="GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA]"
     Region          <28..203
                     /region_name="CsgG"
                     /note="Curli biogenesis system outer membrane secretion
                     channel CsgG [Cell wall/membrane/envelope biogenesis];
                     COG1462"
                     /db_xref="CDD:441071"
     Region          <301..439
                     /region_name="OmpA_like"
                     /note="Putative OmpA-OmpF-like porin family; cl46805"
                     /db_xref="CDD:481145"
ORIGIN      
        1 ifiilfcsnl fsqivkneis ekyikeniav feiqdvstgy skdlgkkvtt liensltrmk
       61 rfnivdrenl dkylkemelq ltgitdeqvi emgkiygysk aitgkithss trydydsddg
      121 tgtiyanvdl vlqivdvstt kilysskvsg ssyysidryp sqafrdaaid eacndlvykv
      181 stkmrnifki tlkisditdg nvillagydh gltkntrfkv ysksedivlp sgnviegqyk
      241 qkgtlrikdm gseysiatis rgrniqvgdi vretyignfi fglninyasy kinplvkefq
      301 gtnsaggkik vnlnkndyal gmhlkfgydf qlfspnlsmg llfgdffkts ygidtrfnfd
      361 inikiyqeiv rlvltpyvgl gvtftdigev yggdyrngnl lipngtkiks tdvmlgigll
      421 aniqynitdt lginagvgyr fytkpinagt yyednsfnmp eeiktvnltg lefmvgvygl
      481 f
//
LOCUS       WP_258019276             109 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Brachyspira
            pilosicoli].
ACCESSION   WP_258019276
VERSION     WP_258019276.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira pilosicoli
  ORGANISM  Brachyspira pilosicoli
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 109)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Brachyspira pilosicoli"
                     /db_xref="taxon:52584"
     Protein         <1..>109
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..108
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            4..37
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 iafqtnilal nasveaarag ehgkgfavva sevrnlaqns qtsakditll idniyekink
       61 saetareskl ifddiqskve ntakimneis ttaleqetsi ehvnisisk
//
LOCUS       WP_258019349             345 aa            linear   BCT 02-MAR-2025
DEFINITION  T6SS immunity protein Tli4 family protein [Pseudomonas
            chlororaphis].
ACCESSION   WP_258019349
VERSION     WP_258019349.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas chlororaphis
  ORGANISM  Pseudomonas chlororaphis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 345)
  AUTHORS   Lu,D., Zheng,Y., Liao,N., Wei,L., Xu,B., Liu,X. and Liu,J.
  TITLE     The structural basis of the Tle4-Tli4 complex reveals the
            self-protection mechanism of H2-T6SS in Pseudomonas aeruginosa
  JOURNAL   Acta Crystallogr D Biol Crystallogr 70 (Pt 12), 3233-3243 (2014)
   PUBMED   25478841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037813.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18426.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Pseudomonas chlororaphis"
                     /db_xref="taxon:587753"
     Protein         1..345
                     /product="T6SS immunity protein Tli4 family protein"
                     /calculated_mol_wt=37696
     Region          40..>148
                     /region_name="Tli4_N"
                     /note="Tle cognate immunity protein 4 N-terminal domain;
                     pfam18443"
                     /db_xref="CDD:436506"
     Region          173..332
                     /region_name="Tli4_C"
                     /note="Tle cognate immunity protein 4 C-terminal domain;
                     pfam18426"
                     /db_xref="CDD:436493"
ORIGIN      
        1 mmrmhqfftv lgivaltgit scallpysrn psmdktgwit hcfgrflidl ppqaevragy
       61 ylwgdnieal detpvtlaar vdqreqelka qphrrqqgsl flrrldlggn stgllswksn
      121 astamyllda yaisrptwra yrwmggvskd repqgiesat slahslrsre aneipsepgf
      181 cierayiagn sfqgerfdig vtfpeypgvh feftsstgae edrlldrasg flagaarmvl
      241 gietlrkrer ggavpadeyl lastdkgqri ytfaweaqgk dgsitepnis aalgvlersp
      301 dssgklpapp fksdkealal wdtvigsvrl rpvssatrgg naggs
//
LOCUS       WP_258019350             379 aa            linear   BCT 02-MAR-2025
DEFINITION  T6SS immunity protein Tli4 family protein [Pseudomonas
            chlororaphis].
ACCESSION   WP_258019350
VERSION     WP_258019350.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas chlororaphis
  ORGANISM  Pseudomonas chlororaphis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 379)
  AUTHORS   Lu,D., Zheng,Y., Liao,N., Wei,L., Xu,B., Liu,X. and Liu,J.
  TITLE     The structural basis of the Tle4-Tli4 complex reveals the
            self-protection mechanism of H2-T6SS in Pseudomonas aeruginosa
  JOURNAL   Acta Crystallogr D Biol Crystallogr 70 (Pt 12), 3233-3243 (2014)
   PUBMED   25478841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037813.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18426.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Pseudomonas chlororaphis"
                     /db_xref="taxon:587753"
     Protein         1..379
                     /product="T6SS immunity protein Tli4 family protein"
                     /calculated_mol_wt=41920
     Region          40..>130
                     /region_name="Tli4_N"
                     /note="Tle cognate immunity protein 4 N-terminal domain;
                     pfam18443"
                     /db_xref="CDD:436506"
     Region          172..331
                     /region_name="Tli4_C"
                     /note="Tle cognate immunity protein 4 C-terminal domain;
                     pfam18426"
                     /db_xref="CDD:436493"
ORIGIN      
        1 mmrlrqifta lgmvalasit sctsfsssrn psmdktgwit hcfgrflidl ppqaeiragy
       61 ylrgqviepl kddlaglisr idqheqelkr qqhdtkgsmf vrrydlgrgs tgilswasda
      121 siesyylyay avsepvwqpy ywriemepdr eprgievakn lvrdlrsrep neipsepgfc
      181 mdrgyiagsh fqserfdigv tfpdhpgahf eftsstgaee drlldrvggf lagaaravtg
      241 ietlrkrerg gpvpadeyll agtdkgqriy tfaweaqgkd gsvsepnisa algvlerspd
      301 ssgklpappf ksdrealelw dtiidsvrlr pvssaprgsn agspspaapa gstkamdddy
      361 aiekfladlk pnnswmdel
//
LOCUS       WP_258019362             228 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding oxidoreductase [Pseudomonas chlororaphis].
ACCESSION   WP_258019362
VERSION     WP_258019362.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas chlororaphis
  ORGANISM  Pseudomonas chlororaphis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 228)
  AUTHORS   Lu,G., Campbell,W.H., Schneider,G. and Lindqvist,Y.
  TITLE     Crystal structure of the FAD-containing fragment of corn nitrate
            reductase at 2.5 A resolution: relationship to other flavoprotein
            reductases
  JOURNAL   Structure 2 (9), 809-821 (1994)
   PUBMED   7812715
REFERENCE   2  (residues 1 to 228)
  AUTHORS   Hyde,G.E., Crawford,N.M. and Campbell,W.H.
  TITLE     The sequence of squash NADH:nitrate reductase and its relationship
            to the sequences of other flavoprotein oxidoreductases. A family of
            flavoprotein pyridine nucleotide cytochrome reductases
  JOURNAL   J Biol Chem 266 (35), 23542-23547 (1991)
   PUBMED   1748631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013161.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00970.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Pseudomonas chlororaphis"
                     /db_xref="taxon:587753"
     Protein         1..228
                     /product="FAD-binding oxidoreductase"
                     /calculated_mol_wt=25597
     Region          10..224
                     /region_name="FNR_like"
                     /note="Ferredoxin reductase (FNR), an FAD and NAD(P)
                     binding protein, was intially identified as a chloroplast
                     reductase activity, catalyzing the electron transfer from
                     reduced iron-sulfur protein ferredoxin to NADP+ as the
                     final step in the electron transport...; cl06868"
                     /db_xref="CDD:447143"
     Site            order(29,40..43,57..59,64..67,106)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99778"
     Site            order(40,42..43)
                     /site_type="other"
                     /note="conserved FAD binding motif [chemical binding]"
                     /db_xref="CDD:99778"
     Site            order(64,67,70,77)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99778"
     Site            order(101,105..108,110)
                     /site_type="other"
                     /note="beta-alpha-beta structure motif"
                     /db_xref="CDD:99778"
     Site            order(106..107,131..133,196..197)
                     /site_type="other"
                     /note="NAD binding pocket [chemical binding]"
                     /db_xref="CDD:99778"
ORIGIN      
        1 mykedkgsvf ilrlklsaht miaadpgqyi evevgdgvfr aysianiphk dgvielhvry
       61 rqngafserl khsvqlndvl wirgpygdfk ldctserkll fiatgtgfsp ilsmlasgai
      121 ndervihfyw ggrfhedlyf ldsilslvnd yknlyfnpvl sspsrldgwk gmvghvqncv
      181 vgeidclrgf dvyacgspgm iqdafnlftt qrnlpagqfy sdafysnq
//
LOCUS       WP_258019367             253 aa            linear   BCT 02-MAR-2025
DEFINITION  GyrI-like domain-containing protein [Pseudomonas chlororaphis].
ACCESSION   WP_258019367
VERSION     WP_258019367.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas chlororaphis
  ORGANISM  Pseudomonas chlororaphis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 253)
  AUTHORS   Anantharaman,V. and Aravind,L.
  TITLE     The SHS2 module is a common structural theme in functionally
            diverse protein groups, like Rpb7p, FtsA, GyrI, and MTH1598/TM1083
            superfamilies
  JOURNAL   Proteins 56 (4), 795-807 (2004)
   PUBMED   15281131
REFERENCE   2  (residues 1 to 253)
  AUTHORS   Romanowski,M.J., Gibney,S.A. and Burley,S.K.
  TITLE     Crystal structure of the Escherichia coli SbmC protein that
            protects cells from the DNA replication inhibitor microcin B17
  JOURNAL   Proteins 47 (3), 403-407 (2002)
   PUBMED   11948793
REFERENCE   3  (residues 1 to 253)
  AUTHORS   Kwon,H.J., Bennik,M.H., Demple,B. and Ellenberger,T.
  TITLE     Crystal structure of the Escherichia coli Rob transcription factor
            in complex with DNA
  JOURNAL   Nat Struct Biol 7 (5), 424-430 (2000)
   PUBMED   10802742
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018184.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06445.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Pseudomonas chlororaphis"
                     /db_xref="taxon:587753"
     Protein         1..253
                     /product="GyrI-like domain-containing protein"
                     /calculated_mol_wt=28263
     Region          2..95
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Region          104..252
                     /region_name="YdeE"
                     /note="Predicted transcriptional regulator YdeE, contains
                     AraC-type DNA-binding domain [Transcription]; COG3708"
                     /db_xref="CDD:442922"
ORIGIN      
        1 mrhydsiglf tpalagqdng yryykpeqig ilgrivwlrq lgmgleeirg ladsgalhsv
       61 lslrqalqah ageletqiar sqnvlgqlqr ylaqpeyslp apqtpvrvtl aaqriigmaw
      121 qqddqgsiae lwqrfepreq eiqrlaepvg tygicqplsd gqwryvaglp vsaeaplveg
      181 mveleipacq yarvehrgtv rtlpetfraa ysewlpaagm radegvefey tgerffgpmh
      241 pdsvvelyip lkn
//
LOCUS       WP_258019488             555 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease, partial [Brachyspira hampsonii].
ACCESSION   WP_258019488
VERSION     WP_258019488.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira hampsonii
  ORGANISM  Brachyspira hampsonii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 555)
  AUTHORS   Bujnicki,J.M. and Rychlewski,L.
  TITLE     Identification of a PD-(D/E)XK-like domain with a novel
            configuration of the endonuclease active site in the
            methyl-directed restriction enzyme Mrr and its homologs
  JOURNAL   Gene 267 (2), 183-191 (2001)
   PUBMED   11313145
REFERENCE   2  (residues 1 to 555)
  AUTHORS   Waite-Rees,P.A., Keating,C.J., Moran,L.S., Slatko,B.E.,
            Hornstra,L.J. and Benner,J.S.
  TITLE     Characterization and expression of the Escherichia coli Mrr
            restriction system
  JOURNAL   J Bacteriol 173 (16), 5207-5219 (1991)
   PUBMED   1650347
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016362.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04471.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Brachyspira hampsonii"
                     /db_xref="taxon:1287055"
     Protein         <1..555
                     /product="restriction endonuclease"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_process="GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
     Region          <43..244
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Site            order(58..59,62..63,65,95,98..99,102..103,105..106,129,
                     132..133,136..137,140)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          58..82
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          93..123
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          128..155
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <480..549
                     /region_name="Mrr_cat"
                     /note="Restriction endonuclease; cl46443"
                     /db_xref="CDD:480783"
ORIGIN      
        1 tlyiiiavif iiilistiim iknifsknkn kpkknikkmm nelqknisen endldsiyql
       61 amleekygdf nnalekyekl ikeryfadnd ineieiykkl epaysqlgdk eksfkyslli
      121 ekaepnniyy amklgtmlgk egkyklacey fnkvivsken idaeeaktaa lsffmikdyr
      181 ksiifleely kkisndkeid vseiynleil mismyisade lnraitfieq ilsnknisee
      241 hrlyinkmym ytlyklsdne ifrkmynnii slynleeady kyaglifdfa fysyflkdid
      301 asirfftkln sfhkleysvy yldqillyln evnkaslqls klrnamklnd ekyvnerydk
      361 yidselieiw ekvlglwegn fynfdyinsl veiqntidvd kilneyniek qlnddnrqkr
      421 itnidtiysl slsnfkklcq niiqnklsys ilqeysdnvi nyeygddvny layptnknkk
      481 dltlisikrw kntevgelii rdfllmvnes gakngililp vklsnsaksy akhnekitvy
      541 trsqfnsflk snfvk
//
LOCUS       WP_258019509             127 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Brachyspira
            hampsonii].
ACCESSION   WP_258019509
VERSION     WP_258019509.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira hampsonii
  ORGANISM  Brachyspira hampsonii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 127)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Brachyspira hampsonii"
                     /db_xref="taxon:1287055"
     Protein         <1..127
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..122
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
ORIGIN      
        1 favvasevrn laqttqtsvk sitdlienvy ekidkatgta resqeifiei qnkideaski
       61 megisnsame qqngidqvki aiadmdqttq knaalveeat asaellfaqs kelmdaihlf
      121 klpdgtr
//
LOCUS       WP_258019532             125 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Brachyspira
            hampsonii].
ACCESSION   WP_258019532
VERSION     WP_258019532.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira hampsonii
  ORGANISM  Brachyspira hampsonii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 125)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Brachyspira hampsonii"
                     /db_xref="taxon:1287055"
     Protein         <1..125
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..124
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
ORIGIN      
        1 favvasevrn laqttqasvk ditalvdsts skidiatnta kqsqdifakl qnkvletskl
       61 meditsnalq qqsgtnqist einnmetvtt qnatlaensn eiskslveka rflensieff
      121 kishn
//
LOCUS       WP_258019534             124 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Brachyspira
            hampsonii].
ACCESSION   WP_258019534
VERSION     WP_258019534.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira hampsonii
  ORGANISM  Brachyspira hampsonii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 124)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Brachyspira hampsonii"
                     /db_xref="taxon:1287055"
     Protein         <1..124
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..123
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
ORIGIN      
        1 gfavvasevr nlaqttqssv kditslvdnt aekidtatnt aresqeifvq lqekvsgtsd
       61 lmqnisstal eqetgvsqis iainsiesst tqnaalaees selskklfdk akfleesikf
      121 fris
//
LOCUS       WP_258019542             123 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Brachyspira
            hampsonii].
ACCESSION   WP_258019542
VERSION     WP_258019542.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira hampsonii
  ORGANISM  Brachyspira hampsonii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 123)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Brachyspira hampsonii"
                     /db_xref="taxon:1287055"
     Protein         <1..123
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..123
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
ORIGIN      
        1 gfavvasevr nlaqttqssv kditdlvdna ydkinkatet ahhsqeifad lrtkidetan
       61 imkgissaav eqqsgveqvn ravsemdgat qmnnalvnda enaskdlvaq anslqhamkf
      121 fkl
//
LOCUS       WP_258019544             321 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5682 family protein, partial [Brachyspira hampsonii].
ACCESSION   WP_258019544
VERSION     WP_258019544.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira hampsonii
  ORGANISM  Brachyspira hampsonii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040143.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18934.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Brachyspira hampsonii"
                     /db_xref="taxon:1287055"
     Protein         <1..>321
                     /product="DUF5682 family protein"
ORIGIN      
        1 gpdyvnkink nlareiwkye yktavdsvli dksvygvtie elasnlivek lnsrigaaev
       61 skllieanvm giysfftdny nkieetilsd nnfvslcscl nnlsylanme ainnnlsier
      121 eslfcnydim svieslakqv ftiavinmds iknlpeeeal knshyiknly sftlenpnwc
      181 didifnnkid smldntfgss hiyavclalk yksgrltade fshiissfme ssdiesssyf
      241 lngilsaard ilfineniie sidlaikkld edkfleilpn fryafanlsp ieierlsyii
      301 adkynisknk ilidvnlpie e
//
LOCUS       WP_258019595             148 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Brachyspira
            hampsonii].
ACCESSION   WP_258019595
VERSION     WP_258019595.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira hampsonii
  ORGANISM  Brachyspira hampsonii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 148)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Brachyspira hampsonii"
                     /db_xref="taxon:1287055"
     Protein         <1..148
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..146
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            3..36
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 afqtnilaln aaveaarage qgkgfavvas evrnlaqnsq ssakditali nviydkisks
       61 vekakeseki fedlekkiee tsnimrdise taieqqsgvd qvniavsqmd svtqqnaglv
      121 eqsasaaasl lneardleda mqffklnk
//
LOCUS       WP_258019600             112 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Brachyspira
            hampsonii].
ACCESSION   WP_258019600
VERSION     WP_258019600.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira hampsonii
  ORGANISM  Brachyspira hampsonii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Brachyspira hampsonii"
                     /db_xref="taxon:1287055"
     Protein         1..>112
                     /product="ABC transporter substrate-binding protein"
     Region          31..>112
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mkkifiaflm ifliviscgk ksetssgavs svsinlgpep ktmdptlnsi nvvssyilha
       61 fegltkidsn nnvrpgmaet wdisddglvy tfhlrknakw sdgkpvtahd fe
//
LOCUS       WP_258019804              91 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Pseudomonas sp.
            MAG002Y].
ACCESSION   WP_258019804
VERSION     WP_258019804.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas sp. MAG002Y
  ORGANISM  Pseudomonas sp. MAG002Y
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 91)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 91)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Pseudomonas sp. MAG002Y"
                     /db_xref="taxon:2678690"
     Protein         1..91
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=9266
     Region          3..>67
                     /region_name="FabG"
                     /note="NAD(P)-dependent dehydrogenase, short-chain alcohol
                     dehydrogenase family [Lipid transport and metabolism];
                     COG1028"
                     /db_xref="CDD:440651"
ORIGIN      
        1 mfivtggtqg igaavveklv aeghqvvftg rdesagqalq trlktavfva gdvlseqdcq
       61 kvvshamilg eadcpawstv pacpavvssp r
//
LOCUS       WP_258019877             208 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Pseudomonas sp.
            MAG002Y].
ACCESSION   WP_258019877
VERSION     WP_258019877.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas sp. MAG002Y
  ORGANISM  Pseudomonas sp. MAG002Y
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 208)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Pseudomonas sp. MAG002Y"
                     /db_xref="taxon:2678690"
     Protein         <1..208
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..207
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(2..3,6,9..10,13..14,17,20..21,23..24,28,30..31,34,
                     37..38,41..42,45,48,51..52,55,59,62,69,73,76,79..80,83,
                     86..87,90..91,93..94,97..98,111..112,115,118..119,122,
                     125..126,128..129,132..133,136,139..140,143,146..147,
                     149..150,153..154,156..157,160,163..164,167,170..171)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            51..84
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 eegrrvlgqt ltametlsan isascgride lnqkttrigh ileviqgise qtnllalnaa
       61 ieaaragdag rgfavvadev rglahrtqss areiqsmiqe lqtgageavs tmtesqrfse
      121 dsmtiaqkan erlgsvaeri tdidgmtqsv aaateeqsav veslnvdite inslnqqgve
      181 nlnatlgach aleqqanrld qlvssfri
//
LOCUS       WP_258019944             155 aa            linear   BCT 02-MAR-2025
DEFINITION  MEKHLA domain-containing protein [Pseudomonas sp. MAG002Y].
ACCESSION   WP_258019944
VERSION     WP_258019944.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas sp. MAG002Y
  ORGANISM  Pseudomonas sp. MAG002Y
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 155)
  AUTHORS   Magnani,E. and Barton,M.K.
  TITLE     A per-ARNT-sim-like sensor domain uniquely regulates the activity
            of the homeodomain leucine zipper transcription factor REVOLUTA in
            Arabidopsis
  JOURNAL   Plant Cell 23 (2), 567-582 (2011)
   PUBMED   21357492
REFERENCE   2  (residues 1 to 155)
  AUTHORS   Mukherjee,K. and Burglin,T.R.
  TITLE     MEKHLA, a novel domain with similarity to PAS domains, is fused to
            plant homeodomain-leucine zipper III proteins
  JOURNAL   Plant Physiol 140 (4), 1142-1150 (2006)
   PUBMED   16607028
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11179573
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Pseudomonas sp. MAG002Y"
                     /db_xref="taxon:2678690"
     Protein         1..155
                     /product="MEKHLA domain-containing protein"
                     /calculated_mol_wt=17417
     Region          13..151
                     /region_name="MEKHLA"
                     /note="MEKHLA domain; pfam08670"
                     /db_xref="CDD:462555"
ORIGIN      
        1 mkeatpmktd vllftllats yeqhvgkrlv pvplagqaaa dwlyysapfc vlahnaendp
       61 vfmyanqaaq qrfgysweei tqlpsrlsas pqdreerqrf idqvkrdgys sgysgvrvmk
      121 sgqcfliqna tlwqlhdaeg ryqgqavlip qskdl
//
LOCUS       WP_258020021              85 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA translocase FtsK [Yersinia enterocolitica].
ACCESSION   WP_258020021
VERSION     WP_258020021.1
KEYWORDS    RefSeq.
SOURCE      Yersinia enterocolitica
  ORGANISM  Yersinia enterocolitica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 85)
  AUTHORS   Sivanathan,V., Allen,M.D., de Bekker,C., Baker,R.,
            Arciszewska,L.K., Freund,S.M., Bycroft,M., Lowe,J. and
            Sherratt,D.J.
  TITLE     The FtsK gamma domain directs oriented DNA translocation by
            interacting with KOPS
  JOURNAL   Nat Struct Mol Biol 13 (11), 965-972 (2006)
   PUBMED   17057717
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020952.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09397.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Yersinia enterocolitica"
                     /db_xref="taxon:630"
     Protein         1..85
                     /product="DNA translocase FtsK"
                     /calculated_mol_wt=9122
     Region          21..81
                     /region_name="Ftsk_gamma"
                     /note="This domain directs oriented DNA translocation and
                     forms a winged helix structure; smart00843"
                     /db_xref="CDD:197911"
ORIGIN      
        1 malggeatss swvdldgaer ddddrypeav efirtsgkas isglqrelri gynraawlle
       61 rmqvegivsq ptpdgtrqvl vgega
//
LOCUS       WP_258020029             205 aa            linear   BCT 02-MAR-2025
DEFINITION  YiiX/YebB-like N1pC/P60 family cysteine hydrolase [Pseudomonas sp.
            MAG002Y].
ACCESSION   WP_258020029
VERSION     WP_258020029.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas sp. MAG002Y
  ORGANISM  Pseudomonas sp. MAG002Y
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 205)
  AUTHORS   Xu,Q., Rawlings,N.D., Chiu,H.J., Jaroszewski,L., Klock,H.E.,
            Knuth,M.W., Miller,M.D., Elsliger,M.A., Deacon,A.M., Godzik,A.,
            Lesley,S.A. and Wilson,I.A.
  TITLE     Structural analysis of papain-like NlpC/P60 superfamily enzymes
            with a circularly permuted topology reveals potential lipid binding
            sites
  JOURNAL   PLoS One 6 (7), e22013 (2011)
   PUBMED   21799766
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017519.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05708.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Pseudomonas sp. MAG002Y"
                     /db_xref="taxon:2678690"
     Protein         1..205
                     /product="YiiX/YebB-like N1pC/P60 family cysteine
                     hydrolase"
                     /calculated_mol_wt=22867
     Region          42..>168
                     /region_name="Peptidase_C92"
                     /note="Permuted papain-like amidase enzyme, YaeF/YiiX, C92
                     family; cl46416"
                     /db_xref="CDD:480756"
ORIGIN      
        1 mnslyrwalt allcmglait syegrqpqal ptlpgqrlsp pslavgdwlf rlgtstdsri
       61 veqvsgsrfs hvgmvvattp tvlivhattd ddpahpnqvl ltpldeflkp dmarhfavar
      121 ptflnpeqke riaqylkstl grtfvleprd kphlycttll aeaiatqlps faprwtsldv
      181 pvfrgdylfp qafadypgle wiyrq
//
LOCUS       WP_258020058              86 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase [Pseudomonas sp. MAG002Y].
ACCESSION   WP_258020058
VERSION     WP_258020058.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas sp. MAG002Y
  ORGANISM  Pseudomonas sp. MAG002Y
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 86)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 86)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Pseudomonas sp. MAG002Y"
                     /db_xref="taxon:2678690"
     Protein         1..86
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=8937
     Region          8..>32
                     /region_name="FMN_red"
                     /note="NADPH-dependent FMN reductase; cl00438"
                     /db_xref="CDD:469770"
     Region          <37..86
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
ORIGIN      
        1 mnsdsipvrt vivyhsgyrh termaaavae gagtsgvlda irdacsvsva rvalawllak
       61 pyatrviiga kridqleanl gavnts
//
LOCUS       WP_417281889            1899 aa            linear   BCT 02-MAR-2025
DEFINITION  pullulanase-type alpha-1,6-glucosidase [Catellatospora aurea].
ACCESSION   WP_417281889
VERSION     WP_417281889.1
KEYWORDS    RefSeq.
SOURCE      Catellatospora aurea
  ORGANISM  Catellatospora aurea
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Catellatospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: TIGR02103.1
            Evidence Source    :: JCVI
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1899
                     /organism="Catellatospora aurea"
                     /db_xref="taxon:1337874"
     gene            1..1899
                     /gene="pulA"
     Protein         1..1899
                     /product="pullulanase-type alpha-1,6-glucosidase"
                     /GO_function="GO:0051060 - pullulanase activity [Evidence
                     IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /GO_process="GO:0005983 - starch catabolic process
                     [Evidence IEA]"
                     /GO_process="GO:0051678 - pullulan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=202491
     Region          61..528
                     /region_name="AmyAc_bac_CMD_like_2"
                     /note="Alpha amylase catalytic domain found in bacterial
                     cyclomaltodextrinases and related proteins; cd11339"
                     /db_xref="CDD:200478"
     Site            order(148,150,318,320..321,354,356,378,381,423..425)
                     /site_type="active"
                     /db_xref="CDD:200478"
     Region          <151..>324
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
     Site            order(320,354,424)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:200478"
     Region          728..824
                     /region_name="PUD"
                     /note="Bacterial pullanase-associated domain; pfam03714"
                     /db_xref="CDD:461022"
     Region          831..929
                     /region_name="CBM41_pullulanase"
                     /note="Family 41 Carbohydrate-Binding Module from
                     pullulanase-like enzymes; cd10315"
                     /db_xref="CDD:199215"
     Site            order(850,852,894,901,906)
                     /site_type="other"
                     /note="carbohydrate binding site [chemical binding]"
                     /db_xref="CDD:199215"
     Region          935..1024
                     /region_name="CBM41_pullulanase"
                     /note="Family 41 Carbohydrate-Binding Module from
                     pullulanase-like enzymes; cd10315"
                     /db_xref="CDD:199215"
     Site            order(953,955,994,1001,1006)
                     /site_type="other"
                     /note="carbohydrate binding site [chemical binding]"
                     /db_xref="CDD:199215"
     Region          1040..1897
                     /region_name="pullul_strch"
                     /note="alpha-1,6-glucosidases, pullulanase-type;
                     TIGR02103"
                     /db_xref="CDD:273974"
ORIGIN      
        1 mrnprtllig llavvlavap fvvirsltgg gpaqwvqagd tywadepaaa alaaagtprr
       61 qaeqfyfvlp drfangdtrn dkgglsgdrl ktgldktdkg fyhggdlagl mdkldyiegl
      121 gttaiwlapv fqnrpvqgtg adasagyhgy witdftqvdp hfgtnadlkk lvklahqrgi
      181 kiyldvivnh tadviayeen qysyvdkkts pytdtagraf edvnyadgks gfpktdrssm
      241 pytpvfksaa dakaktpawl ndptmyhnrg dstfsgenst ygdffglddl wterpevvrg
      301 mtkvysdwie stgvdgfrld takhvnmefw pqfsqgiavd arkagkpdff mfgevysadp
      361 nimssyvrqg rlqatldfgf qaaaqgfvtg gsgqglgdly aadglytspg tdastlptfl
      421 gnhdmgrigt fisnveadat valqrdrlah elmfltrgqp vvysgdeqgf tgnggdkdar
      481 qdmfasqvad yldddllgtd rthaadqfdt vhplyraiae lgalrkahpa lrdgvqvtrh
      541 agdgvfafsr idpaqrfeyl vasnsgtapk tvtvdtatas avfgqlypaa gngptagadg
      601 kvtitvpals sivlradral psagdpqiti tapgsgaeva traavtaqvt gdplatvtfa
      661 aqvgdgpwkl lgtskavgeh tvfhdltgla ggtavtykav vrdgagrtas ttsaitvasp
      721 aqaaqreyvl vhyqrgdgdy dpwglytwgd vdgsmqhpwp qgqpfageds ygrfawvkvk
      781 pgatnvgflv vngsgskdve adrsvdpsrv geiwlksgda tiypsraaat gkvdmhyrra
      841 dasypgwglh lwgdglaaga gtdwssprqp dgtdafgahw svpvgdatkp vnfivhrgde
      901 kdpnadlamd mgvgeawias gdatvhptra aaektavlhy rradgnyagw glhlwdgnan
      961 pvewgspmqp tgtdafgayw riplvdgatg vnyiihkgde kdlpsdqrld fatfgneawi
     1021 lsgqqaylrp svkgaaldid lsksyahwld rgtiawnkhd pdgkvydlvv apngglsvvd
     1081 galagdftki rlsasgglse aqrqkfphlw aygafdvnat lasiknalrg qlvvtesdhe
     1141 gkllsatgvq ipgalddvys gaakaalgpv fakgrpslal waptakdvql elfdspsatp
     1201 rtvsmlrddn tgvwkvtgss dwtgryyrfr vsvwqpakaq vvtasvtdpy avalsansth
     1261 gqlidvaklp gaavkapsyt graqiqelsv rdfsvadstv pqdkrgtyaa ftdprtagmr
     1321 hlksladagv shlhllpvfd fatipekrtd qqqpacdlps lprdssqqqa cvagvaatdg
     1381 ynwgydplhy tvpeggyate pegkarnvef qsmvdgihra glrvvldvvy nhtsaagddp
     1441 ksvldrivpg yyhrlledga vatstccant apehammgkl vvdslvtwak tyrvdgfrfd
     1501 lmghhpkqnl ldvraaldkl tlakdgvdgk aillygegwn fgevandarf eqatqanmag
     1561 tgiatfndrl rdavrgggpf dgnprlqgfa sglftdpngd avngtaaeqk arllhqqdqi
     1621 kvgltgnlag ftftdsagnq vsgaevdyng apagytkapa eaityvdahd neilfdalay
     1681 klpaatpald rarmqvlals tvvlsqgtgf vtagsdllrs ksldrnsyns gdwfnairwd
     1741 casgngfglg lppaadnesk wayakpllad palvptceai glagdrfael lrvrassplf
     1801 slrtqaevqq avsfplsgaa etpgvitmvi kkdgktvvvv fnattssttq tvaslknarl
     1861 glhpvlaasa dplvrqsayt sstgaftvpa rtvtvfvtk
//
LOCUS       WP_258020150              52 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3927 family protein [Yersinia enterocolitica].
ACCESSION   WP_258020150
VERSION     WP_258020150.1
KEYWORDS    RefSeq.
SOURCE      Yersinia enterocolitica
  ORGANISM  Yersinia enterocolitica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024464.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13064.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..52
                     /organism="Yersinia enterocolitica"
                     /db_xref="taxon:630"
     Protein         1..52
                     /product="DUF3927 family protein"
                     /calculated_mol_wt=5615
     Region          4..48
                     /region_name="DUF3927"
                     /note="Protein of unknown function (DUF3927); pfam13064"
                     /db_xref="CDD:372454"
ORIGIN      
        1 mdklrwacvg lllflvvavd ftsrlmsiva dgvmvagita iiwpvlrkgn er
//
LOCUS       WP_258020275             137 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6396 domain-containing protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_258020275
VERSION     WP_258020275.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040400.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19933.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>137
                     /product="DUF6396 domain-containing protein"
     Region          <2..128
                     /region_name="TPR"
                     /note="TPR repeat [General function prediction only];
                     COG0790"
                     /db_xref="CDD:440553"
     Region          4..29
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          88..>137
                     /region_name="DUF6396"
                     /note="Domain of unknown function (DUF6396); pfam19933"
                     /db_xref="CDD:437765"
ORIGIN      
        1 laqdpemalr yyrkaadegn pqaqayvgdk lapidiapdi srqmrrcaae qgerevssdl
       61 gvnlknnkrf qqateafqlg vaagdstsag flmhgfsgpe pmdrlfylal ekdperarry
      121 eqigavlaky swahpvv
//
LOCUS       WP_258020299             172 aa            linear   BCT 02-MAR-2025
DEFINITION  primase-like DNA-binding domain-containing protein, partial
            [Yersinia enterocolitica].
ACCESSION   WP_258020299
VERSION     WP_258020299.1
KEYWORDS    RefSeq.
SOURCE      Yersinia enterocolitica
  ORGANISM  Yersinia enterocolitica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Evans,E., Klemperer,N., Ghosh,R. and Traktman,P.
  TITLE     The vaccinia virus D5 protein, which is required for DNA
            replication, is a nucleic acid-independent nucleoside
            triphosphatase
  JOURNAL   J Virol 69 (9), 5353-5361 (1995)
   PUBMED   7636979
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015259.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03288.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Yersinia enterocolitica"
                     /db_xref="taxon:630"
     Protein         <1..>172
                     /product="primase-like DNA-binding domain-containing
                     protein"
     Region          <1..164
                     /region_name="COG3378"
                     /note="DNA primase, phage- or plasmid-associated
                     [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442605"
ORIGIN      
        1 vaidpkhkap ysvripavvl avnnnamtfs drsggisrrr vifnfsevvp enerdpqlae
       61 kiegelavii rhllarfahq neakqllyeq qkseealaik regdslvdfc gyltaaaecn
      121 gmlvgnaeiv pfnpwrylyh aylaymrgng lgkpvsltrf gtdmcgamae yg
//
LOCUS       WP_258020423             152 aa            linear   BCT 02-MAR-2025
DEFINITION  toxin-activating lysine-acyltransferase [Yersinia enterocolitica].
ACCESSION   WP_258020423
VERSION     WP_258020423.1
KEYWORDS    RefSeq.
SOURCE      Yersinia enterocolitica
  ORGANISM  Yersinia enterocolitica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 152)
  AUTHORS   Trent,M.S., Worsham,L.M. and Ernst-Fonberg,M.L.
  TITLE     HlyC, the internal protein acyltransferase that activates hemolysin
            toxin: role of conserved histidine, serine, and cysteine residues
            in enzymatic activity as probed by chemical modification and
            site-directed mutagenesis
  JOURNAL   Biochemistry 38 (11), 3433-3439 (1999)
   PUBMED   10079090
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014813.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02794.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Yersinia enterocolitica"
                     /db_xref="taxon:630"
     Protein         1..152
                     /product="toxin-activating lysine-acyltransferase"
                     /GO_component="GO:0005737 - cytoplasm [Evidence IEA]"
                     /GO_function="GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009404 - toxin metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=17861
     Region          13..151
                     /region_name="HlyC"
                     /note="ACP:hemolysin acyltransferase (hemolysin-activating
                     protein) [Posttranslational modification, protein
                     turnover, chaperones]; COG2994"
                     /db_xref="CDD:442233"
ORIGIN      
        1 mvnnkftsle sseiqkiigg vmlltqrspl hrayfvsewf qqiypaiiln qfryyederg
       61 nplafcnwaf lseknmneil sgerdirked wqsgsnmffp emiapyghak mmvndlrrni
      121 hysrkgervc airgqlnkqc ssdkpkiqwf ki
//
LOCUS       WP_258020824             218 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Streptomyces
            anatolicus].
ACCESSION   WP_258020824
VERSION     WP_258020824.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces anatolicus
  ORGANISM  Streptomyces anatolicus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 218)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Streptomyces anatolicus"
                     /db_xref="taxon:2675858"
     Protein         1..>218
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          8..>218
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 madqnglqlp ltaaqsgmwl aqqvnpenpm ysiaecveia gevdtahfea alrrtvaeae
       61 tlrirflpgd dgpvqvvvpd pdwplhtvdv sgrpdpaaaa eawmldrvrt pvdltggplf
      121 tfglikladd rytwfsrvhh tivdgyswsl ivsrvavlys glvagtepkp dpfgsvrelv
      181 dqdsayrvse qfavdsafws grlagltepa slaprptr
//
LOCUS       WP_258020825             321 aa            linear   BCT 02-MAR-2025
DEFINITION  TauD/TfdA family dioxygenase [Streptomyces anatolicus].
ACCESSION   WP_258020825
VERSION     WP_258020825.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces anatolicus
  ORGANISM  Streptomyces anatolicus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 321)
  AUTHORS   Eichhorn,E., van der Ploeg,J.R., Kertesz,M.A. and Leisinger,T.
  TITLE     Characterization of alpha-ketoglutarate-dependent taurine
            dioxygenase from Escherichia coli
  JOURNAL   J Biol Chem 272 (37), 23031-23036 (1997)
   PUBMED   9287300
REFERENCE   2  (residues 1 to 321)
  AUTHORS   Suwa,Y., Wright,A.D., Fukimori,F., Nummy,K.A., Hausinger,R.P.,
            Holben,W.E. and Forney,L.J.
  TITLE     Characterization of a chromosomally encoded
            2,4-dichlorophenoxyacetic acid/alpha-ketoglutarate dioxygenase from
            Burkholderia sp. strain RASC
  JOURNAL   Appl Environ Microbiol 62 (7), 2464-2469 (1996)
   PUBMED   8779585
REFERENCE   3  (residues 1 to 321)
  AUTHORS   Ruetschi,U., Nordin,I., Odelhog,B., Jornvall,H. and Lindstedt,S.
  TITLE     gamma-Butyrobetaine hydroxylase. Structural characterization of the
            Pseudomonas enzyme
  JOURNAL   Eur J Biochem 213 (3), 1075-1080 (1993)
   PUBMED   8504802
REFERENCE   4  (residues 1 to 321)
  AUTHORS   Streber,W.R., Timmis,K.N. and Zenk,M.H.
  TITLE     Analysis, cloning, and high-level expression of
            2,4-dichlorophenoxyacetate monooxygenase gene tfdA of Alcaligenes
            eutrophus JMP134
  JOURNAL   J Bacteriol 169 (7), 2950-2955 (1987)
   PUBMED   3036764
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014698.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02668.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Streptomyces anatolicus"
                     /db_xref="taxon:2675858"
     Protein         1..321
                     /product="TauD/TfdA family dioxygenase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=35746
     Region          37..315
                     /region_name="CAS_like"
                     /note="Clavaminic acid synthetase (CAS) -like; CAS is a
                     trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase
                     carrying out three reactions in the biosynthesis of
                     clavulanic acid, an inhibitor of class A serine
                     beta-lactamases. In general, Fe(II)-2OG oxygenases...;
                     cl00184"
                     /db_xref="CDD:444731"
ORIGIN      
        1 mktpftdaea evlerngtrl vrvhprhggd hrawftanne alrsamyeha avmvkdcgla
       61 eqaelavlae eiggrtleyn erstprsrvt gkvytsteyp adqsipqhne saysenwphn
      121 vfffcalaaq sggetpvads gavlerlpad lvrrfeekgv vytrtyrtgm glswqegfqt
      181 ddkgyvesyc adhniqtdwd gdllrtrqkr qavtvhpvtg rkvwfnqahl fhvnalpeav
      241 reglleicge dglprnayyg dgtpitadel atilgvydet tlaetwgtgd llgidnilts
      301 hgrrpftgdr kvlvamtqre e
//
LOCUS       WP_258020943             221 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5995 family protein [Streptomyces anatolicus].
ACCESSION   WP_258020943
VERSION     WP_258020943.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces anatolicus
  ORGANISM  Streptomyces anatolicus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 221)
  AUTHORS   Heinzelmann,E., Berger,S., Muller,C., Hartner,T., Poralla,K.,
            Wohlleben,W. and Schwartz,D.
  TITLE     An acyl-CoA dehydrogenase is involved in the formation of the Delta
            cis3 double bond in the acyl residue of the lipopeptide antibiotic
            friulimicin in Actinoplanes friuliensis
  JOURNAL   Microbiology (Reading) 151 (Pt 6), 1963-1974 (2005)
   PUBMED   15942003
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039623.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19458.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Streptomyces anatolicus"
                     /db_xref="taxon:2675858"
     Protein         1..221
                     /product="DUF5995 family protein"
                     /calculated_mol_wt=23878
     Region          4..218
                     /region_name="DUF5995"
                     /note="Family of unknown function (DUF5995); pfam19458"
                     /db_xref="CDD:466095"
ORIGIN      
        1 mrgvdgvvar mralgddwpp rdgvavfnrv ylsvteevhr siglgafadt raattlgvrf
       61 aerylaavda aaeghrppac wrplfqyrrh pgvhplqfal aginahighd lalalvdacr
      121 tlgcepagle defdrvgdil vsleeriree lmpgpdllqi gdplthlags wslerardga
      181 waaartlwal relpgvagef gerldgavgl vsrilltplp d
//
LOCUS       WP_258020969             737 aa            linear   BCT 02-MAR-2025
DEFINITION  catalase [Streptomyces anatolicus].
ACCESSION   WP_258020969
VERSION     WP_258020969.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces anatolicus
  ORGANISM  Streptomyces anatolicus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012425.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00199.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Streptomyces anatolicus"
                     /db_xref="taxon:2675858"
     Protein         1..737
                     /product="catalase"
                     /EC_number="1.11.1.6"
                     /GO_function="GO:0004096 - catalase activity [Evidence
                     IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=78805
     Region          8..736
                     /region_name="katE"
                     /note="hydroperoxidase II; Provisional; PRK11249"
                     /db_xref="CDD:236886"
ORIGIN      
        1 msekrndipg apapqppsva eptepheplp pkpdqeapea vsptgkptga pasaraqsga
       61 ylttaqgarl yetdhslkag argpvllqdh hlrekithfd heripervvh argaaahgif
      121 kgygtaakvt kaaflakdte tpvfvrfstv lgsrgssdtv rdtrgfatkf yteegtfdlv
      181 gnnipvffiq daikfpdiih agkphpdrei pqaqsahdtf wdfvtlhtea ahhtlwnmsd
      241 rgiprsyrmm egfgvhtfrl vnakgdttlv kfhwkpklgv hsltweeaqi tngmdpdfhr
      301 rdladaieag afpqwelgiq vfpdnaeqtf egidlldptn ivpeelapvq piglltlnan
      361 ptnyfaeteq vafhpghlvp giditddpll tgrlfsyldt qisrlggpnf aqlpinrtha
      421 pvndmlrdgm hqtavhsgta pyrpnsldgg cpflagadng ayievpvdvp aarkvreape
      481 sfsdhfsqpr lfwlsmtpve qehiiaaytf elskcyeqai keralqvlan idpqlcgqva
      541 dglglpapep tvkladvaps palsqvgkvw pvegrivgiv agpeadldgv raareallga
      601 gmvplviapt ggalgsgkdp iavqrtfana rsvefdalll agapapgada ygardakage
      661 psagavadpr ivlmlaeafr hgkaiggwag aesaleaagv tttapgvalv dtgadaveqv
      721 arllgehrvw arfpaal
//
LOCUS       WP_258021019             446 aa            linear   BCT 02-MAR-2025
DEFINITION  maltokinase N-terminal cap-like domain-containing protein
            [Streptomyces anatolicus].
ACCESSION   WP_258021019
VERSION     WP_258021019.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces anatolicus
  ORGANISM  Streptomyces anatolicus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 446)
  AUTHORS   Fraga,J., Maranha,A., Mendes,V., Pereira,P.J., Empadinhas,N. and
            Macedo-Ribeiro,S.
  TITLE     Structure of mycobacterial maltokinase, the missing link in the
            essential GlgE-pathway
  JOURNAL   Sci Rep 5, 8026 (2015)
   PUBMED   25619172
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 446)
  AUTHORS   Li,J., Guan,X., Shaw,N., Chen,W., Dong,Y., Xu,X., Li,X. and Rao,Z.
  TITLE     Homotypic dimerization of a maltose kinase for molecular
            scaffolding
  JOURNAL   Sci Rep 4, 6418 (2014)
   PUBMED   25245657
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037041.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18085.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Streptomyces anatolicus"
                     /db_xref="taxon:2675858"
     Protein         1..446
                     /product="maltokinase N-terminal cap-like
                     domain-containing protein"
                     /calculated_mol_wt=49038
     Region          <5..446
                     /region_name="Ble"
                     /note="Predicted trehalose synthase [Carbohydrate
                     transport and metabolism]; COG3281"
                     /db_xref="CDD:442512"
ORIGIN      
        1 mlktasqspg slspprllts lagilrawlp eqrwfagkgr pvtdlavlsm telhpgclhl
       61 lirtgpagpp edcyqlilgv rehlpprlhh avvgrpdagp lagltvydal ldpwsaglll
      121 erlrvpgvmg plrferdart avpeglpprl ldgeqsntsl vygdafilkl frriqyginp
      181 dlevpwalar ggcarvpapv awfwttepht atlgvlqpfl peatdgwtla lrslstgedf
      241 tdesyelgra taevhlalaq afgsepadpy ggsplaaamt grletaarqm aalvpyvsrl
      301 ktaygavagh gpgreaqrvh gdlhlgqvlk arhewfiidf egeparplde rrraqapird
      361 iagmlrsfdy aahsrrpwhp qwvercreay cagyaaestw dprteaellr ayetdravye
      421 alyearhrpd wlpvpmaaia rlaees
//
LOCUS       WP_258021171             414 aa            linear   BCT 02-MAR-2025
DEFINITION  globin domain-containing protein, partial [Streptomyces
            anatolicus].
ACCESSION   WP_258021171
VERSION     WP_258021171.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces anatolicus
  ORGANISM  Streptomyces anatolicus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 414)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 414)
  AUTHORS   Bogusz,D., Appleby,C.A., Landsmann,J., Dennis,E.S., Trinick,M.J.
            and Peacock,W.J.
  TITLE     Functioning haemoglobin genes in non-nodulating plants
  JOURNAL   Nature 331 (6152), 178-180 (1988)
   PUBMED   2448639
REFERENCE   3  (residues 1 to 414)
  AUTHORS   Bashford,D., Chothia,C. and Lesk,A.M.
  TITLE     Determinants of a protein fold. Unique features of the globin amino
            acid sequences
  JOURNAL   J Mol Biol 196 (1), 199-216 (1987)
   PUBMED   3656444
REFERENCE   4  (residues 1 to 414)
  AUTHORS   Kinniburgh,A.J., Maquat,L.E., Schedl,T., Rachmilewitz,E. and
            Ross,J.
  TITLE     mRNA-deficient beta o-thalassemia results from a single nucleotide
            deletion
  JOURNAL   Nucleic Acids Res 10 (18), 5421-5427 (1982)
   PUBMED   6292840
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012272.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00042.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Streptomyces anatolicus"
                     /db_xref="taxon:2675858"
     Protein         <1..414
                     /product="globin domain-containing protein"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
     Region          47..177
                     /region_name="Hmp"
                     /note="Hemoglobin-like flavoprotein [Energy production and
                     conversion]; COG1017"
                     /db_xref="CDD:440640"
     Region          190..403
                     /region_name="O2ase_reductase_like"
                     /note="The oxygenase reductase FAD/NADH binding domain
                     acts as part of the multi-component bacterial oxygenases
                     which oxidize hydrocarbons using oxygen as the oxidant.
                     Electron transfer is from NADH via FAD (in the oxygenase
                     reductase) and an [2FE-2S]...; cd06187"
                     /db_xref="CDD:99784"
     Site            order(218,231..234,248..250,252,256..258,297,300,402)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99784"
     Site            order(231,233..234)
                     /site_type="other"
                     /note="FAD binding motif [chemical binding]"
                     /db_xref="CDD:99784"
     Site            order(255,258,261,268,276,278)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99784"
     Site            order(292,296..299,301)
                     /site_type="other"
                     /note="beta-alpha-beta structure motif"
                     /db_xref="CDD:99784"
     Site            order(297..298,323..325,377..378)
                     /site_type="other"
                     /note="NAD binding pocket [chemical binding]"
                     /db_xref="CDD:99784"
ORIGIN      
        1 seqdptpppt ptaaaepqpq peapapgaea fvqsakparp skpaspdaal vqrtmaevgp
       61 vadqvtsyfy allftrhpdl ralfpaamdt qrdrllkall taaehidhtd vlvsylknlg
      121 rghrkygtrp ehypavgecl iaslsryasa iwdeeteaaw vrtyttisqv midaaaedel
      181 rapawwfaev vshdlrtpdi avvtvrpdqp ypflagqyts letpwwpriw rhysfasapr
      241 sdgllsfhvk avpagwvsna lvhrarpgdm lrlgppagsm tvdhttdsgl lclgggtgia
      301 pikalvedva ehgrrrpvev fygartdhdl ydidtmlrlq qthpwlavrp ivdqraqlpd
      361 avreygpwne ydaylsgppg mirsgvdvlr dagipegrir hdsveelvaa aagd
//
LOCUS       WP_258021249             410 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Streptomyces
            anatolicus].
ACCESSION   WP_258021249
VERSION     WP_258021249.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces anatolicus
  ORGANISM  Streptomyces anatolicus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Streptomyces anatolicus"
                     /db_xref="taxon:2675858"
     Protein         1..410
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=42151
     Region          34..390
                     /region_name="ftrA"
                     /note="transcriptional activator FtrA; Provisional;
                     PRK09393"
                     /db_xref="CDD:181818"
ORIGIN      
        1 maqessqaad lrpgssgpgp sgpgpsgpvp grlhrvvviv densnpfelg catevfglrr
       61 pelgrelydf alcspepatl mrdgfftlsg vagldaadga dtvivpnrpd tdvprrpavl
      121 davrraharg arlvgfcsga ftlaeagvld grratahwqw adsfrerfpa vrlesdvlfv
      181 ddgdiltaag ssaaldlglh lvrrdhgaei anavsrrlvf aahrdggqrq fverpvpdvp
      241 dvslapllaw aqerlgdsst pgaggtgsgg tgpggtgpgg tgpggtgagg tgpgrpgpsg
      301 tgpltvaala aragvspatl hrrfraqlgt tplawltger valacrlier geerldvvar
      361 rsglgtaanl rarlrretgl spsdyrrrfg pggespaagr ipaataartp
//
LOCUS       WP_258021254             540 aa            linear   BCT 02-MAR-2025
DEFINITION  GAF domain-containing protein, partial [Streptomyces anatolicus].
ACCESSION   WP_258021254
VERSION     WP_258021254.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces anatolicus
  ORGANISM  Streptomyces anatolicus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 540)
  AUTHORS   Hughes,J.
  TITLE     Phytochrome three-dimensional structures and functions
  JOURNAL   Biochem Soc Trans 38 (2), 710-716 (2010)
   PUBMED   20298248
REFERENCE   2  (residues 1 to 540)
  AUTHORS   Heikaus,C.C., Pandit,J. and Klevit,R.E.
  TITLE     Cyclic nucleotide binding GAF domains from phosphodiesterases:
            structural and mechanistic insights
  JOURNAL   Structure 17 (12), 1551-1557 (2009)
   PUBMED   20004158
REFERENCE   3  (residues 1 to 540)
  AUTHORS   Aravind,L. and Ponting,C.P.
  TITLE     The GAF domain: an evolutionary link between diverse
            phototransducing proteins
  JOURNAL   Trends Biochem Sci 22 (12), 458-459 (1997)
   PUBMED   9433123
REFERENCE   4  (residues 1 to 540)
  AUTHORS   Santero,E., Hoover,T.R., North,A.K., Berger,D.K., Porter,S.C. and
            Kustu,S.
  TITLE     Role of integration host factor in stimulating transcription from
            the sigma 54-dependent nifH promoter
  JOURNAL   J Mol Biol 227 (3), 602-620 (1992)
   PUBMED   1404379
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013736.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01590.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Streptomyces anatolicus"
                     /db_xref="taxon:2675858"
     Protein         1..>540
                     /product="GAF domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
     Region          36..151
                     /region_name="RsbW"
                     /note="Anti-sigma regulatory factor (Ser/Thr protein
                     kinase) [Signal transduction mechanisms]; COG2172"
                     /db_xref="CDD:441775"
     Region          179..277
                     /region_name="PAS"
                     /note="PAS fold; pfam00989"
                     /db_xref="CDD:395786"
     Region          314..468
                     /region_name="PtsP"
                     /note="Signal transduction protein containing GAF and PtsI
                     domains [Signal transduction mechanisms]; COG3605"
                     /db_xref="CDD:442824"
ORIGIN      
        1 mssgelgvdt vdtvdthtrs avitaraaat fepvgrsvat arsfvrdtlq gwgftdivdd
       61 avvltselvt navvhagtaa dvlclrsdda vrievsdryp ereiplqqsa lsmgspdreg
      121 grglqlcaal atrwgvdytp tnkqvwfqld lphrpvgtrt agpslpaell piadgrvrva
      181 viqidrvgai sawnedaedl fgyaaehvtg kplndlaawp htpgtstgia ealqlsrweg
      241 sygirgahgr vipvyashlr vrdtdgepst vcllvrdder avlqtplrga tpeqatlsep
      301 natdpfevfi gspapddldg llqrtverar dmldgdaafl llatddetel evrastglps
      361 arqrfarvpv eagpgrygsa rmpavhedlt vvpgavplln gtgmrsvvtv plkvegrltg
      421 slgvaaespd rysneealrl qfaadriala vesarlgele rlrrgslsfl veasdllagt
      481 ldrdqtlalm aqmtvptlat wcavytiadq saepylsyvl hedeeridgl kallskippp
//
LOCUS       WP_258021317              68 aa            linear   BCT 02-MAR-2025
DEFINITION  DALR anticodon-binding domain-containing protein, partial
            [Streptomyces anatolicus].
ACCESSION   WP_258021317
VERSION     WP_258021317.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces anatolicus
  ORGANISM  Streptomyces anatolicus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 68)
  AUTHORS   Wolf,Y.I., Aravind,L., Grishin,N.V. and Koonin,E.V.
  TITLE     Evolution of aminoacyl-tRNA synthetases--analysis of unique domain
            architectures and phylogenetic trees reveals a complex history of
            horizontal gene transfer events
  JOURNAL   Genome Res 9 (8), 689-710 (1999)
   PUBMED   10447505
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017555.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05746.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Streptomyces anatolicus"
                     /db_xref="taxon:2675858"
     Protein         <1..68
                     /product="DALR anticodon-binding domain-containing
                     protein"
                     /GO_function="GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
     Region          <1..65
                     /region_name="argS"
                     /note="arginyl-tRNA synthetase; Reviewed; PRK01611"
                     /db_xref="CDD:234964"
ORIGIN      
        1 arhrapdrla rhlvgtadal lgyehavlpv gdekpsaahr arlalaeaag tvlagglsll
       61 gisaptyl
//
LOCUS       WP_258021340             210 aa            linear   BCT 02-MAR-2025
DEFINITION  ANTAR domain-containing protein [Streptomyces anatolicus].
ACCESSION   WP_258021340
VERSION     WP_258021340.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces anatolicus
  ORGANISM  Streptomyces anatolicus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 210)
  AUTHORS   Shu,C.J. and Zhulin,I.B.
  TITLE     ANTAR: an RNA-binding domain in transcription antitermination
            regulatory proteins
  JOURNAL   Trends Biochem Sci 27 (1), 3-5 (2002)
   PUBMED   11796212
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03861.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Streptomyces anatolicus"
                     /db_xref="taxon:2675858"
     Protein         1..210
                     /product="ANTAR domain-containing protein"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /calculated_mol_wt=22540
     Region          5..86
                     /region_name="STAS_anti-anti-sigma_factors"
                     /note="Sulphate Transporter and Anti-Sigma factor
                     antagonist) domain of anti-anti-sigma factors, key
                     regulators of anti-sigma factors by phosphorylation;
                     cd07043"
                     /db_xref="CDD:132914"
     Site            order(8,10..12,18,41,43..45,47..49,52..53,75,79..80,82)
                     /site_type="active"
                     /note="anti sigma factor interaction site [active]"
                     /db_xref="CDD:132914"
     Site            44
                     /site_type="other"
                     /note="regulatory phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:132914"
     Region          <111..186
                     /region_name="AmiR"
                     /note="Two-component response regulator, AmiR/NasT family,
                     consists of REC and RNA-binding antiterminator (ANTAR)
                     domains [Signal transduction mechanisms, Transcription];
                     COG3707"
                     /db_xref="CDD:442921"
ORIGIN      
        1 msvlvrgqld lhagqrlrsg lrhtvsrptr aidldlsgvr fcdcsglnll lslrqwaleq
       61 gkaivisass paverildlt gtrdlfsaeg leeervadpi argagprdgd avaceeseqe
      121 lrvevaqlrr amqtrptidl argilmssfr lspeaawevl vtisqntntk lyrlaedlvg
      181 avqggglpea vqeqvaaava rmtdtaqrgg
//
LOCUS       WP_258021599             128 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6114 domain-containing protein, partial [Streptomyces
            anatolicus].
ACCESSION   WP_258021599
VERSION     WP_258021599.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces anatolicus
  ORGANISM  Streptomyces anatolicus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 128)
  AUTHORS   Wehmeier,U.F. and Piepersberg,W.
  TITLE     Enzymology of aminoglycoside biosynthesis-deduction from gene
            clusters
  JOURNAL   Methods Enzymol 459, 459-491 (2009)
   PUBMED   19362651
REFERENCE   2  (residues 1 to 128)
  AUTHORS   Unwin,J., Standage,S., Alexander,D., Hosted,T. Jr., Horan,A.C. and
            Wellington,E.M.
  TITLE     Gene cluster in Micromonospora echinospora ATCC15835 for the
            biosynthesis of the gentamicin C complex
  JOURNAL   J Antibiot (Tokyo) 57 (7), 436-445 (2004)
   PUBMED   15376556
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039352.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19609.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Streptomyces anatolicus"
                     /db_xref="taxon:2675858"
     Protein         <1..128
                     /product="DUF6114 domain-containing protein"
ORIGIN      
        1 ipprphrprp vaaclvlala avelgvfpla rpsllglqgi sgasavlvaa allacaahlw
       61 arpagattsg aaalvlglls yplanlggfl igmflallgg slalawrkde ggseavpvpv
      121 deavgaer
//
LOCUS       WP_258021821             190 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6396 domain-containing protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_258021821
VERSION     WP_258021821.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040400.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19933.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>190
                     /product="DUF6396 domain-containing protein"
     Region          <2..128
                     /region_name="TPR"
                     /note="TPR repeat [General function prediction only];
                     COG0790"
                     /db_xref="CDD:440553"
     Region          4..29
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          88..190
                     /region_name="DUF6396"
                     /note="Domain of unknown function (DUF6396); pfam19933"
                     /db_xref="CDD:437765"
ORIGIN      
        1 laqdpemalr yyrkaadegn pqaqayvgdk lapidiapdi srqmrrcaae qgerevssdl
       61 gvnlknnkrf qqateafqlg vaagdstsag flmhgfsgpe pmdrlfylal ekdperarry
      121 eqigavlaky swahpvvpei ndivplppap lpewdgklkw leeweanipp pvpdaaliek
      181 lakakqlnpa
//
LOCUS       WP_258021868             131 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Brachyspira
            hampsonii].
ACCESSION   WP_258021868
VERSION     WP_258021868.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira hampsonii
  ORGANISM  Brachyspira hampsonii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 131)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Brachyspira hampsonii"
                     /db_xref="taxon:1287055"
     Protein         <1..131
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..130
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
ORIGIN      
        1 rageqgrgfa ivasevrsla qtvneaatni tsivdetvkr idigsesask sssilntind
       61 lvkemenelq disqsimqee dgiiqmntai kelnnitqen sglanqnsts sseisnmskd
      121 iineieyfkv k
//
LOCUS       WP_258021880             324 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Brachyspira
            hampsonii].
ACCESSION   WP_258021880
VERSION     WP_258021880.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira hampsonii
  ORGANISM  Brachyspira hampsonii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 324)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Brachyspira hampsonii"
                     /db_xref="taxon:1287055"
     Protein         <1..324
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <4..321
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(110..111,114..115,118,121..122,124..125,128,
                     131..132,135,138..139,142..143,146,149..150,152..153,157,
                     159..160,163,166..167,170..171,174,177,180..181,184,188,
                     191,198,202,205,208..209,212,215..216,219..220,222..223,
                     226..227,240..241,244,247..248,251,254..255,257..258,
                     261..262,265,268..269,272,275..276,278..279,282..283,
                     285..286,289,292..293,296,299)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            180..213
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 svfillsaie avlviviakp isntldntis tiksmskgnf nthfdekeln kkdqtgdvir
       61 slndmqnklg diiysmkdni nginssvnii tngnidlsdr svsqasslee ltrsiefvfs
      121 slkdtaenag naknmsekvs natrngvnai natsenmali seaskkisdi tkiiesiafq
      181 tnilalnasv eaaragdqgk gfavvasevr nlainvgnaa kditaianet vekinngsas
      241 vqassyilnq iessvndvlt llteissaii eeenslsqin tavieinkit qdtskiandg
      301 anaskdmldk snniveqvsy fhfn
//
LOCUS       WP_258022008             482 aa            linear   BCT 02-MAR-2025
DEFINITION  MGH1-like glycoside hydrolase domain-containing protein, partial
            [Streptomyces anatolicus].
ACCESSION   WP_258022008
VERSION     WP_258022008.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces anatolicus
  ORGANISM  Streptomyces anatolicus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 482)
  AUTHORS   Ndeh,D., Rogowski,A., Cartmell,A., Luis,A.S., Basle,A., Gray,J.,
            Venditto,I., Briggs,J., Zhang,X., Labourel,A., Terrapon,N.,
            Buffetto,F., Nepogodiev,S., Xiao,Y., Field,R.A., Zhu,Y.,
            O'Neil,M.A., Urbanowicz,B.R., York,W.S., Davies,G.J., Abbott,D.W.,
            Ralet,M.C., Martens,E.C., Henrissat,B. and Gilbert,H.J.
  TITLE     Complex pectin metabolism by gut bacteria reveals novel catalytic
            functions
  JOURNAL   Nature 544 (7648), 65-70 (2017)
   PUBMED   28329766
  REMARK    Erratum:[Nature. 2017 Aug 31;548(7669):612. doi:
            10.1038/nature23659.. PMID: 29411780]
REFERENCE   2  (residues 1 to 482)
  AUTHORS   Bianchetti,C.M., Elsen,N.L., Fox,B.G. and Phillips,G.N. Jr.
  TITLE     Structure of cellobiose phosphorylase from Clostridium thermocellum
            in complex with phosphate
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 67 (Pt 11),
            1345-1349 (2011)
   PUBMED   22102229
REFERENCE   3  (residues 1 to 482)
  AUTHORS   Kurakata,Y., Uechi,A., Yoshida,H., Kamitori,S., Sakano,Y.,
            Nishikawa,A. and Tonozuka,T.
  TITLE     Structural insights into the substrate specificity and function of
            Escherichia coli K12 YgjK, a glucosidase belonging to the glycoside
            hydrolase family 63
  JOURNAL   J Mol Biol 381 (1), 116-128 (2008)
   PUBMED   18586271
  REMARK    Erratum:[J Mol Biol. 2008 Nov 14;383(3):745]
REFERENCE   4  (residues 1 to 482)
  AUTHORS   Cui,Z., Maruyama,Y., Mikami,B., Hashimoto,W. and Murata,K.
  TITLE     Crystal structure of glycoside hydrolase family 78
            alpha-L-Rhamnosidase from Bacillus sp. GL1
  JOURNAL   J Mol Biol 374 (2), 384-398 (2007)
   PUBMED   17936784
REFERENCE   5  (residues 1 to 482)
  AUTHORS   Gibson,R.P., Gloster,T.M., Roberts,S., Warren,R.A., Storch de
            Gracia,I., Garcia,A., Chiara,J.L. and Davies,G.J.
  TITLE     Molecular basis for trehalase inhibition revealed by the structure
            of trehalase in complex with potent inhibitors
  JOURNAL   Angew Chem Int Ed Engl 46 (22), 4115-4119 (2007)
   PUBMED   17455176
REFERENCE   6  (residues 1 to 482)
  AUTHORS   Hidaka,M., Honda,Y., Kitaoka,M., Nirasawa,S., Hayashi,K.,
            Wakagi,T., Shoun,H. and Fushinobu,S.
  TITLE     Chitobiose phosphorylase from Vibrio proteolyticus, a member of
            glycosyl transferase family 36, has a clan GH-L-like
            (alpha/alpha)(6) barrel fold
  JOURNAL   Structure 12 (6), 937-947 (2004)
   PUBMED   15274915
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046269.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22422.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Streptomyces anatolicus"
                     /db_xref="taxon:2675858"
     Protein         <1..482
                     /product="MGH1-like glycoside hydrolase domain-containing
                     protein"
     Region          8..463
                     /region_name="GDB1"
                     /note="Glycogen debranching enzyme (alpha-1,6-glucosidase)
                     [Carbohydrate transport and metabolism]; COG3408"
                     /db_xref="CDD:442634"
ORIGIN      
        1 paappteelr araaevlwan wtgtstvpsr alyphqwswd safiaiglrh lsplraqlel
       61 etllsaqwgd grvphivfnd avpldayfpg pdfwrsatag rragapahlq tsgivqppvh
      121 alavwlvhra dpglsrarsf larlrprlta whrylldard vggaglaavl hpweqgmdns
      181 pcwdgplgrv epaapggfrr adldhgvped rptdtdygry vrlaaeyrdr eyidsagpst
      241 ptvegsgtst veapaflved pafnallias eyalalieae ldrparpart drpakraarv
      301 rceraralte tlvarlwdpe reiflcrdlr tdalltergv tgliplvlpa lppriaaalv
      361 rtacgphfgl ggvtrlvpsy dltgpafdlr rywrgpawfn tnwlvekglr lhgerarada
      421 lreavldaag asgfaeyvdp ytgegcgarg fgwtaaltld llhdgrngtg ggdlrtercg
      481 he
//
LOCUS       WP_258022046             412 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleotide disphospho-sugar-binding domain-containing protein
            [Streptomyces anatolicus].
ACCESSION   WP_258022046
VERSION     WP_258022046.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces anatolicus
  ORGANISM  Streptomyces anatolicus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 412)
  AUTHORS   Moncrieffe,M.C., Fernandez,M.J., Spiteller,D., Matsumura,H.,
            Gay,N.J., Luisi,B.F. and Leadlay,P.F.
  TITLE     Structure of the glycosyltransferase EryCIII in complex with its
            activating P450 homologue EryCII
  JOURNAL   J Mol Biol 415 (1), 92-101 (2012)
   PUBMED   22056329
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018434.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06722.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Streptomyces anatolicus"
                     /db_xref="taxon:2675858"
     Protein         1..412
                     /product="nucleotide disphospho-sugar-binding
                     domain-containing protein"
                     /calculated_mol_wt=43464
     Site            order(9..10,12,164,167..168,172,251,318,320,322..323,326)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(9,251,318,320,322..323)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Region          10..412
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Site            10
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     Site            order(24,128,400..401,404)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:340817"
ORIGIN      
        1 mlgvsdwpgh wfamvplgwa lqsaghevrv vcapsqsepv aragltpvpv ldgwemtfqa
       61 rignylnwke grwpftaapp hpltgvplts ieefdlrnwi venndrlqgm arrstdaava
      121 fgrdwrpdli lhdllslegl ltarvlgtas alhlwgpagt deqepglkll pldmsqafqr
      181 hgvgevsfdh vshvidpcpa dlaprllpae rlpvrfvpyn gpgglpgtpe eqagalapts
      241 grprvcvvwg tsvtsmfgda sfavpkivea lagldvevtl avtgadrqri gelppgvrll
      301 eqaplhlllp gcdlvvhhgg agcvmtslaa gvpqlalpng vdqpmnarrl aaagvgralp
      361 nptadaasir aevagmladp syaaaaarvr agmtalptpa dlvprlekla sq
//
LOCUS       WP_258022063             145 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Brachyspira
            hampsonii].
ACCESSION   WP_258022063
VERSION     WP_258022063.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira hampsonii
  ORGANISM  Brachyspira hampsonii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 145)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Brachyspira hampsonii"
                     /db_xref="taxon:1287055"
     Protein         <1..145
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..145
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            2..35
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 fqtnilalna sveaarageq grgfsvvase vrtlaqntqt svkditslia dsdekikiaa
       61 eaarksqeif tdikdkient animrdistt aveqqsgveq vnqavlkmda stqenaslve
      121 qskeasitls seaqklidav syfkl
//
LOCUS       WP_258022191             211 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Brachyspira
            hampsonii].
ACCESSION   WP_258022191
VERSION     WP_258022191.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira hampsonii
  ORGANISM  Brachyspira hampsonii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 211)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Brachyspira hampsonii"
                     /db_xref="taxon:1287055"
     Protein         <1..>211
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..156
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
ORIGIN      
        1 rageqgrgfa vvasevrnla qttqtsvkdi ttlvadseek iaaatetare skeifqnlrt
       61 qieetakimq dlsstameqq agvdqvniai tqmdmttqqn aalveestaa sealfsqaee
      121 lvtameffkl rgantkrnit kverkksspt tdakavqenk passksssaf kpskpelksp
      181 ikkhheekmp qmpaktvkdn efgntfdtsk d
//
LOCUS       WP_258022206             196 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Brachyspira
            hampsonii].
ACCESSION   WP_258022206
VERSION     WP_258022206.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira hampsonii
  ORGANISM  Brachyspira hampsonii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Brachyspira hampsonii"
                     /db_xref="taxon:1287055"
     Protein         <1..196
                     /product="ABC transporter substrate-binding protein"
     Region          <4..195
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 dfrenggeyi dlskdaysnn vemakqlmae agypngegfp vleykttadl vyiqvaeaiq
       61 qmwkenlgvd lqissmewaa yqqmrsekny qlirtlwigd ysdpmtflen ylsyrsqnss
      121 gysnkqfdny ieaarnsanq eirmkamhea erlliaednl lipiynpsnp tlvskrlkdy
      181 vltplmeyqf hyayle
//
LOCUS       WP_258022258             199 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein, partial
            [Brachyspira hampsonii].
ACCESSION   WP_258022258
VERSION     WP_258022258.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira hampsonii
  ORGANISM  Brachyspira hampsonii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Brachyspira hampsonii"
                     /db_xref="taxon:1287055"
     Protein         1..>199
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          21..>199
                     /region_name="ABC_6TM_exporters"
                     /note="Six-transmembrane helical domain of the ATP-binding
                     cassette transporters; cl38913"
                     /db_xref="CDD:365789"
     Region          21..44
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:349983"
     Region          53..102
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:349983"
     Region          109..154
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:349983"
     Region          155..199
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:349983"
ORIGIN      
        1 minkrlialm gnakkyiawh viiqlvnlal nitavffmad iiqkasqgnv lkedilktti
       61 aifviiilkf rfnilmanms yhasgrvkqt lrekiyskll tlgsrykekf stseivqism
      121 egvdqletyf grylpqffys miapivlfav lstisiksav illicvplip isiiaivkia
      181 krilkkywgs ysnlgeifl
//
LOCUS       WP_258022295             316 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Streptomyces
            anatolicus].
ACCESSION   WP_258022295
VERSION     WP_258022295.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces anatolicus
  ORGANISM  Streptomyces anatolicus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 316)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Streptomyces anatolicus"
                     /db_xref="taxon:2675858"
     Protein         <1..316
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <3..263
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 gvpgtsftrw agllaeeavs pglvaaeldw wqrslaagge arlavgrgsg trratltvel
       61 padlteaalt tlpaafncga davlltalts aavrhrgsgt gllvhieghg retlsvpvdv
      121 srtvgwfttq ypvlldagsd rregggtavd alkavkeqlr svpnggigwg llrhlnpdts
      181 pvlaelpvpd vrfnylgrft aedaaggell daapdavplg haveidayak esadglrlea
      241 tfsyaegvla evevrelarl wregiavlar etaeggpvga tpsdfplvgl smdqlamleg
      301 dladigdpat eaeggr
//
LOCUS       WP_258022304             394 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Streptomyces
            anatolicus].
ACCESSION   WP_258022304
VERSION     WP_258022304.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces anatolicus
  ORGANISM  Streptomyces anatolicus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 394)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Streptomyces anatolicus"
                     /db_xref="taxon:2675858"
     Protein         <1..394
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <4..359
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 averldpasg vlaqavwvda gpartgrvil vvhhlvvdgv swrvlvpdlr aaceaaaagr
       61 tpaldpvgts frrwaqllta eatserrtae lddwlallgk pqpplgrrel dpgldtvrtl
      121 rhhtwtlppe qaatlvgkap aafhcgvddi llatlagava hwrpetaagl lvdveghgre
      181 pmegadllrt vgwftsvrpv rlevgaaqld aamaggeaag nlvkavkeqa ravpgdglgh
      241 ellrhlnpvt gpvlhaapaa qigfnylgrf aagggadggt gtgpagpwql agetaiggsv
      301 dlgmpathav dagavvrdta dgpeltltls wasrlleeae arrlgatwlk mldglaghtt
      361 dptagghtps dfrllnlaqh qideleagft geqs
//
LOCUS       WP_258022357             486 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5682 family protein, partial [Streptomyces anatolicus].
ACCESSION   WP_258022357
VERSION     WP_258022357.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces anatolicus
  ORGANISM  Streptomyces anatolicus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040143.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18934.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Streptomyces anatolicus"
                     /db_xref="taxon:2675858"
     Protein         <1..>486
                     /product="DUF5682 family protein"
     Region          13..>486
                     /region_name="DUF5682"
                     /note="Family of unknown function (DUF5682); pfam18934"
                     /db_xref="CDD:436841"
ORIGIN      
        1 pegeaapgde vtpggepasg sdaalegeda vridplavla etagyddper wwedvvehrg
       61 sgadafapfe algeamgalr eayedgghgr dlvreahmrl rmraaqkefg pdrvavvcga
      121 whvpalrrkv tvaadrallk glpkvkaemt wvpwthrrls rasgygagia spgwyghlfg
      181 apdrpverwm tkvarllree drlvssahvi eavrladtla amrgrplagl tettdavrav
      241 mcegsdvpla lvhdrlvvgd vlgevpeaap avplqrdltr lqrrlrlkpe alereleldl
      301 rketdaarst llhrlrllgi gwgeparsrg stgtfreawr lrwepelsvr vaeagvwgtt
      361 vlgaatgkas adavgavala dvtalaercl laelpdalpv vmrvladraa leadvghlaq
      421 alpalvrslr ygdvrgtdta algevalgla ervfvglppa stgldaeaal emrghvdavh
      481 qavgll
//
LOCUS       WP_258022360             435 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Streptomyces
            anatolicus].
ACCESSION   WP_258022360
VERSION     WP_258022360.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces anatolicus
  ORGANISM  Streptomyces anatolicus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 435)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Streptomyces anatolicus"
                     /db_xref="taxon:2675858"
     Protein         <1..>435
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          10..429
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation (C) domain of non-ribosomal
                     peptide synthetases(NRPSs) and similar domains including
                     the C-domain of SgcC5, a free-standing NRPS with both
                     ester- and amide- bond forming activity; cd19531"
                     /db_xref="CDD:380454"
ORIGIN      
        1 ptpvppasga plspgqqriw flermlpgrt aynevkaidl dgpldadalr nslralvarh
       61 eqlrtvfrev sgearqfaqa pgevdfavvd gtgpgrdava dtlqaeserr fdlangplfv
      121 trlvrlgper hvlvlslhhi vmdaasaavl ardvsalyra ettgapaaad lpalthtyad
      181 harrqldslg dakaaddlay wkkvldgdlp vldlptdrpr ppvmtsngra lfrtltpels
      241 aavrkfsrer rstlfmtlla gyaaalrrvs gqddlvigtp msdrrppyed vvgffvntla
      301 lrldlsgdpd fgtlldrvra valdaydhad vpfeavvrel aparaldrtp vfqtlaeyet
      361 gdpfrfdlpg vratpldsgp dkaltdlsvy ftdqpdgvrc hleyntdlfd eatvdalfgt
      421 frdvlaeavg pagag
//
LOCUS       WP_258022362              69 aa            linear   BCT 02-MAR-2025
DEFINITION  cation transporter, partial [Streptomyces anatolicus].
ACCESSION   WP_258022362
VERSION     WP_258022362.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces anatolicus
  ORGANISM  Streptomyces anatolicus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 69)
  AUTHORS   Rosenzweig,A.C., Huffman,D.L., Hou,M.Y., Wernimont,A.K.,
            Pufahl,R.A. and O'Halloran,T.V.
  TITLE     Crystal structure of the Atx1 metallochaperone protein at 1.02 A
            resolution
  JOURNAL   Structure 7 (6), 605-617 (1999)
   PUBMED   10404590
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012621.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00403.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Streptomyces anatolicus"
                     /db_xref="taxon:2675858"
     Protein         1..>69
                     /product="cation transporter"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
     Region          1..>56
                     /region_name="ZntA"
                     /note="Cation-transporting P-type ATPase [Inorganic ion
                     transport and metabolism]; COG2217"
                     /db_xref="CDD:441819"
ORIGIN      
        1 mtcascssri erklnrvagv taasvnlate kakvtyadgv evaqlialve klgytaeeiv
       61 ppppepepg
//
LOCUS       WP_258022465              87 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA translocase FtsK [Yersinia enterocolitica].
ACCESSION   WP_258022465
VERSION     WP_258022465.1
KEYWORDS    RefSeq.
SOURCE      Yersinia enterocolitica
  ORGANISM  Yersinia enterocolitica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 87)
  AUTHORS   Sivanathan,V., Allen,M.D., de Bekker,C., Baker,R.,
            Arciszewska,L.K., Freund,S.M., Bycroft,M., Lowe,J. and
            Sherratt,D.J.
  TITLE     The FtsK gamma domain directs oriented DNA translocation by
            interacting with KOPS
  JOURNAL   Nat Struct Mol Biol 13 (11), 965-972 (2006)
   PUBMED   17057717
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020952.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09397.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Yersinia enterocolitica"
                     /db_xref="taxon:630"
     Protein         1..87
                     /product="DNA translocase FtsK"
                     /calculated_mol_wt=9365
     Region          23..83
                     /region_name="Ftsk_gamma"
                     /note="This domain directs oriented DNA translocation and
                     forms a winged helix structure; smart00843"
                     /db_xref="CDD:197911"
ORIGIN      
        1 mvdalggett ssswvdldgv erddddrype avsfiktrgk asisglqrel rigynraawl
       61 lermqaegiv sqptpdgtrq vlvgega
//
LOCUS       WP_258022528             304 aa            linear   BCT 02-MAR-2025
DEFINITION  phage terminase small subunit [Yersinia enterocolitica].
ACCESSION   WP_258022528
VERSION     WP_258022528.1
KEYWORDS    RefSeq.
SOURCE      Yersinia enterocolitica
  ORGANISM  Yersinia enterocolitica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   Linderoth,N.A., Ziermann,R., Haggard-Ljungquist,E., Christie,G.E.
            and Calendar,R.
  TITLE     Nucleotide sequence of the DNA packaging and capsid synthesis genes
            of bacteriophage P2
  JOURNAL   Nucleic Acids Res 19 (25), 7207-7214 (1991)
   PUBMED   1837355
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017731.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05944.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Yersinia enterocolitica"
                     /db_xref="taxon:630"
     gene            1..304
                     /gene="gpM"
     Protein         1..304
                     /product="phage terminase small subunit"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_process="GO:0019069 - viral capsid assembly [Evidence
                     IEA]"
                     /calculated_mol_wt=32814
     Region          2..221
                     /region_name="Phage_term_smal"
                     /note="Phage small terminase subunit; cl19614"
                     /db_xref="CDD:450336"
ORIGIN      
        1 mmltpaqrhf dkvmaerrgt kddvvqgsay eqqlyrlrid qrrlsqfqsh ltratmkrem
       61 lpaydgwldg vlaansgqsd evvttcmvws vdaglyrdal rlaeyvishn lpmadkyqrt
      121 aacfivdqvs eaallrfkga atdnpaieid lllrlqelta dkdmpdeara kllkaigytq
      181 resinladqa saliwlqral aahkdagvkk dievlernlk kaaliaasaa naegsgvtdt
      241 eqatasdait vadgvttlpd tptvtadapa staakpaskt ksaatakksa akaktnsvra
      301 krtp
//
LOCUS       WP_258022581             144 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Brevibacillus
            formosus].
ACCESSION   WP_258022581
VERSION     WP_258022581.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus formosus
  ORGANISM  Brevibacillus formosus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
REFERENCE   1  (residues 1 to 144)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 144)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 144)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 144)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Brevibacillus formosus"
                     /db_xref="taxon:54913"
     Protein         1..144
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=16062
     Region          <3..141
                     /region_name="Uup"
                     /note="ATPase components of ABC transporters with
                     duplicated ATPase domains [General function prediction
                     only]; COG0488"
                     /db_xref="CDD:440254"
ORIGIN      
        1 mdelvqhssl kigympqnye drldltktpi eyldttgmkd aitkafthlg smkftkdemh
       61 qpiknlsggq kakllllkmi ldqceilild eptrslsplt tpvlcralta fagviisish
      121 drrylhevtt avyvltsdgl tkik
//
LOCUS       WP_258022721             298 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleotidyl transferase AbiEii/AbiGii toxin family protein
            [Brevibacillus formosus].
ACCESSION   WP_258022721
VERSION     WP_258022721.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus formosus
  ORGANISM  Brevibacillus formosus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
REFERENCE   1  (residues 1 to 298)
  AUTHORS   Dy,R.L., Przybilski,R., Semeijn,K., Salmond,G.P. and Fineran,P.C.
  TITLE     A widespread bacteriophage abortive infection system functions
            through a Type IV toxin-antitoxin mechanism
  JOURNAL   Nucleic Acids Res 42 (7), 4590-4605 (2014)
   PUBMED   24465005
REFERENCE   2  (residues 1 to 298)
  AUTHORS   Kuchta,K., Knizewski,L., Wyrwicz,L.S., Rychlewski,L. and
            Ginalski,K.
  TITLE     Comprehensive classification of nucleotidyltransferase fold
            proteins: identification of novel families and their
            representatives in human
  JOURNAL   Nucleic Acids Res 37 (22), 7701-7714 (2009)
   PUBMED   19833706
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020419.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08843.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Brevibacillus formosus"
                     /db_xref="taxon:54913"
     Protein         1..298
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /calculated_mol_wt=34612
     Region          <140..250
                     /region_name="AbiEii"
                     /note="Nucleotidyl transferase AbiEii toxin, Type IV TA
                     system; cl00973"
                     /db_xref="CDD:470016"
ORIGIN      
        1 mmityddvag leyeareliv leallrrial vnmpfvlkgs lltrqyldnr eirdaddidl
       61 lyagkirdve hahevftqwm iqvtemdlnd gvvfrsfren afwryidyam addfptintd
      121 iayyfkgqtr eaddyseldl disfnlemda epvplqyqpa fgesflvpyt vplsiqvawk
      181 lhqtivrprf kdlydlkfll shptydndal ketlqalvne csidpsikka dmkkvlvddl
      241 qhiydslsyd ydlrkyagsm drglyftqfv sdlrkkmdfa gingyafesl psptlkkl
//
LOCUS       WP_258022871             261 aa            linear   BCT 02-MAR-2025
DEFINITION  proline dehydrogenase family protein [Brevibacillus formosus].
ACCESSION   WP_258022871
VERSION     WP_258022871.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus formosus
  ORGANISM  Brevibacillus formosus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
REFERENCE   1  (residues 1 to 261)
  AUTHORS   Ling,M., Allen,S.W. and Wood,J.M.
  TITLE     Sequence analysis identifies the proline dehydrogenase and delta
            1-pyrroline-5-carboxylate dehydrogenase domains of the
            multifunctional Escherichia coli PutA protein
  JOURNAL   J Mol Biol 243 (5), 950-956 (1994)
   PUBMED   7966312
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013761.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01619.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Brevibacillus formosus"
                     /db_xref="taxon:54913"
     Protein         1..261
                     /product="proline dehydrogenase family protein"
                     /calculated_mol_wt=29573
     Region          2..>221
                     /region_name="PutA"
                     /note="Proline dehydrogenase [Amino acid transport and
                     metabolism]; COG0506"
                     /db_xref="CDD:440272"
ORIGIN      
        1 mgyrlsvehi gentldlqvv heaqreflal tadcsqlhts vgisfdlshl gllldlemaf
       61 ahvdelaera shsgqylmis meestkteai ismyerlaqr henvgitiqa hlhrslddvk
      121 rvlelpgkir lvkgafkepq eialarsvel neryleladm cvqsgrecsl athdqaivde
      181 larrdylhrp nvevellygv rpelahalre kgvpvrlylt ygtewylylc hrlaehpphv
      241 hqaiadmfdp arlqdvgygm s
//
LOCUS       WP_258022874             513 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Brevibacillus formosus].
ACCESSION   WP_258022874
VERSION     WP_258022874.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus formosus
  ORGANISM  Brevibacillus formosus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Brevibacillus formosus"
                     /db_xref="taxon:54913"
     Protein         1..513
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=53129
     Region          16..495
                     /region_name="PRK14995"
                     /note="SmvA family efflux MFS transporter"
                     /db_xref="CDD:184957"
ORIGIN      
        1 mknaalessn radlnewigl avlslpallv sldlsvmila lphisvsiga dsteqlwimd
       61 iygfmlsgfl itmgslgdri grrkllmiga aafgsasvla aysntsgmli aarallgiag
      121 atvspsslal isnmfrdhkq rslaigiwfm csmggmalgp vvggmmlehf swgsifllgv
      181 pvmallllta shllpeyrdp apghldmtsv vlsmctilpa iyglkemakq glqtlplial
      241 aagvvfgtlf vrrqqrldsp lmdlrlfanp afstalgglf gitltgasml fiaqhlqfve
      301 glsplaaamc mlpgvvasma gmllspiiar rvrpshliga glavsatgci llsqveagsg
      361 lstlivgyif fnvgvapfas lssdliigsa ppakagsaas llqtsgefaf algiavlgsi
      421 gtyvyriqia gfiprdvtpl tsgayresla gavsaakalp epigstllhg aqiafthgmh
      481 avvgvsgglm iaiailtvik lrhippigqk nar
//
LOCUS       WP_258022932              71 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Brevibacillus formosus].
ACCESSION   WP_258022932
VERSION     WP_258022932.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus formosus
  ORGANISM  Brevibacillus formosus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
REFERENCE   1  (residues 1 to 71)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Brevibacillus formosus"
                     /db_xref="taxon:54913"
     Protein         1..71
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=7218
     Region          <2..67
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 meeqarlegf elteqgvggt sdgnfaadag tptldglgpv gdgahasheh ividaipgri
       61 avmlrmfltl s
//
LOCUS       WP_258022953             259 aa            linear   BCT 02-MAR-2025
DEFINITION  portal protein, partial [Salmonella enterica].
ACCESSION   WP_258022953
VERSION     WP_258022953.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 259)
  AUTHORS   Nakasu,S., Fujisawa,H. and Minagawa,T.
  TITLE     Purification of characterization of gene 8 product of bacteriophage
            T3
  JOURNAL   Virology 143 (2), 422-434 (1985)
   PUBMED   3904172
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023657.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12236.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         <1..259
                     /product="portal protein"
     Region          <1..247
                     /region_name="Head-tail_con"
                     /note="Bacteriophage head to tail connecting protein;
                     cl19541"
                     /db_xref="CDD:450324"
ORIGIN      
        1 dkatnppmva ptslktqrvs llpgdvtyld vlsgqdgfkp aylvnpntad lladiqdtrq
       61 tinsayfvdl fmmlqnintr smpveaviem keekllmlgp vlerlndeal nplidrvfsi
      121 marknmlpep pdvmqgmplr ieyisvmaqa qksigltsls qtvgfigqla qfkpealdkl
      181 dvdeaidafs emsgvsptvi vpqeqvqsir eerakqaqaa qamamgqaaa qgaktlsetq
      241 ttdpsaltai anaagapqq
//
LOCUS       WP_258023000             330 aa            linear   BCT 02-MAR-2025
DEFINITION  portal protein, partial [Salmonella enterica].
ACCESSION   WP_258023000
VERSION     WP_258023000.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 330)
  AUTHORS   Nakasu,S., Fujisawa,H. and Minagawa,T.
  TITLE     Purification of characterization of gene 8 product of bacteriophage
            T3
  JOURNAL   Virology 143 (2), 422-434 (1985)
   PUBMED   3904172
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023657.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12236.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         1..>330
                     /product="portal protein"
     Region          4..>330
                     /region_name="Head-tail_con"
                     /note="Bacteriophage head to tail connecting protein;
                     cl19541"
                     /db_xref="CDD:450324"
ORIGIN      
        1 maetekerll kqlaqlkner tsfeshwrdl sdfinprgsr fltsdvnrdd rrntkivdpt
       61 gsmaqrilss gmmsgitspa rpwfklatpd pdmmdygpvk vwlevvqrrm nevfnksnly
      121 qslpvmyasl gtfgtaamav leddqdvirt mpfpigsyyl ansprgsvdt sfrqfsmtvr
      181 qlvqefgldn vsssvqgmwq ngtyetwiev nhcitpnvnr dtgkmdsknk pfrsvyfetg
      241 gdsdkllres gfdefpilap rwevngedvy asscpgmlal gqvkalqveq krkaqlidka
      301 tnppmvapts lktqrvsllp gdvtyldvls
//
LOCUS       WP_258022998             201 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Salmonella enterica].
ACCESSION   WP_258022998
VERSION     WP_258022998.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 201)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 201)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         1..>201
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          105..>200
                     /region_name="VgrG"
                     /note="Uncharacterized conserved protein VgrG, implicated
                     in type VI secretion and phage assembly [Intracellular
                     trafficking, secretion, and vesicular transport, Mobilome:
                     prophages, transposons, General function prediction only];
                     COG3501"
                     /db_xref="CDD:442724"
ORIGIN      
        1 msfvstnnks gmgglttttp pitgesggvt adsvtgsvad aaeaaveqaa gslfgalpep
       61 sglvkaavaa aqaaaaagma qdavsaivsa vaggpgahnv tvsgsavppg allfasldgg
      121 etlselfsyv vqlktpdtln lgyvspaanl plkpmvgkdl cvnieldggg krhisglvta
      181 arvvghegrs vtyelrmepw v
//
LOCUS       WP_258023180             279 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1972 domain-containing protein [Escherichia coli].
ACCESSION   WP_258023180
VERSION     WP_258023180.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020874.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09314.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..279
                     /product="DUF1972 domain-containing protein"
                     /calculated_mol_wt=31993
     Region          <2..279
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mislvrclri kydvililgv sgcmvlplfr lfsrsrvvtn idglewrrdk wgkvtkaflk
       61 fseriavkfs dviiadnqai sdyvkseynk dsiviaygge havindavis deksdyylsl
      121 criepennvs milaafansr yklkfvgnwn nseyglllkd kyskfdniei idsiydieql
      181 filrnmckgy ihghsaggtn pslveamqfg mdifaydcsf nrytteqnah yfsssselck
      241 iidemeigni pkngkimsei aqcryqwsii srmyedtyk
//
LOCUS       WP_258023140             174 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein, partial [Brevibacillus formosus].
ACCESSION   WP_258023140
VERSION     WP_258023140.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus formosus
  ORGANISM  Brevibacillus formosus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Brevibacillus formosus"
                     /db_xref="taxon:54913"
     Protein         <1..>174
                     /product="helicase-related protein"
     Region          <1..174
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
ORIGIN      
        1 alfsatmppa isriaqtylk dpaevtiaak tttsanirqr yrwvsglhkl daltrileve
       61 pfdgmiifar tkaateelaq klqargmaaa aingdmqqaa rektiaqlkd gkldilvatd
      121 vaargldver ishvlnydip ydtesyvhri grtgragrng dailfvtpre kgml
//
LOCUS       WP_258023196              86 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_258023196
VERSION     WP_258023196.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 86)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>86
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
     Region          8..>86
                     /region_name="PRK11638"
                     /note="ECA polysaccharide chain length modulation protein"
                     /db_xref="CDD:236943"
ORIGIN      
        1 mtqpmpgkpa edaeneldir glfrtlwagk lwiigmglaf alialaytff arqewsatai
       61 tdrptvnmlg gyysqqqflr nldars
//
LOCUS       WP_258023200             179 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein, partial [Escherichia coli].
ACCESSION   WP_258023200
VERSION     WP_258023200.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 179)
  AUTHORS   Wang,J., Hofnung,M. and Charbit,A.
  TITLE     The C-terminal portion of the tail fiber protein of bacteriophage
            lambda is responsible for binding to LamB, its receptor at the
            surface of Escherichia coli K-12
  JOURNAL   J Bacteriol 182 (2), 508-512 (2000)
   PUBMED   10629200
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024939.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13550.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>179
                     /product="phage tail protein"
     Region          <1..>170
                     /region_name="COG4733"
                     /note="Phage-related protein, tail protein J [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443767"
ORIGIN      
        1 wngqtltfvq drpsdkvwty nrsnvvmpdd gapfrysfsa lkdrhnavev nwidpnngwe
       61 tatelvedtq aiarygrnvt kmdafgctsr gqahraglwl iktelletqt vdfsvgaegl
      121 rhvpgdviei cdddyagist ggrvlavnsq traltldrei tlpssgttli slvdgsgnp
//
LOCUS       WP_258023250             175 aa            linear   BCT 02-MAR-2025
DEFINITION  replication protein P [Yersinia enterocolitica].
ACCESSION   WP_258023250
VERSION     WP_258023250.1
KEYWORDS    RefSeq.
SOURCE      Yersinia enterocolitica
  ORGANISM  Yersinia enterocolitica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 175)
  AUTHORS   Mallory,J.B., Alfano,C. and McMacken,R.
  TITLE     Host virus interactions in the initiation of bacteriophage lambda
            DNA replication. Recruitment of Escherichia coli DnaB helicase by
            lambda P replication protein
  JOURNAL   J Biol Chem 265 (22), 13297-13307 (1990)
   PUBMED   2165499
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018671.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06992.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Yersinia enterocolitica"
                     /db_xref="taxon:630"
     Protein         1..175
                     /product="replication protein P"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /calculated_mol_wt=19698
     Region          <26..147
                     /region_name="Phage_lambda_P"
                     /note="Replication protein P; pfam06992"
                     /db_xref="CDD:462061"
ORIGIN      
        1 mikiyanrwt akngsrpsdl werqigamts dqlqrvctac mkrcesgnsw ppdfaefval
       61 vaehggghlg ltvtdvlael hryrnefyky scaeefdwrh pvlyqicvdl krlgvekrlt
      121 dsgeeaqagi elakwekraa sgvpippirr qlktpdrhsg ltpaqqlaag nryvk
//
LOCUS       WP_258023309             115 aa            linear   BCT 02-MAR-2025
DEFINITION  HAMP domain-containing protein [Priestia megaterium].
ACCESSION   WP_258023309
VERSION     WP_258023309.1
KEYWORDS    RefSeq.
SOURCE      Priestia megaterium (Bacillus megaterium)
  ORGANISM  Priestia megaterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
REFERENCE   1  (residues 1 to 115)
  AUTHORS   Aravind,L. and Ponting,C.P.
  TITLE     The cytoplasmic helical linker domain of receptor histidine kinase
            and methyl-accepting proteins is common to many prokaryotic
            signalling proteins
  JOURNAL   FEMS Microbiol Lett 176 (1), 111-116 (1999)
   PUBMED   10418137
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012876.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00672.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Priestia megaterium"
                     /db_xref="taxon:1404"
     Protein         1..115
                     /product="HAMP domain-containing protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=12158
     Region          <2..>115
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
ORIGIN      
        1 mitkalkgik nlmetakdgd fqvqdtcesk deigsltasf nkmigglkem imsvgnisst
       61 vaasseelsa saeqnnsaie hissitekla sgsnhqvnqi qesstiihri tnqts
//
LOCUS       WP_258023312             201 aa            linear   BCT 02-MAR-2025
DEFINITION  BadF/BadG/BcrA/BcrD ATPase family protein [Priestia megaterium].
ACCESSION   WP_258023312
VERSION     WP_258023312.1
KEYWORDS    RefSeq.
SOURCE      Priestia megaterium (Bacillus megaterium)
  ORGANISM  Priestia megaterium
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
REFERENCE   1  (residues 1 to 201)
  AUTHORS   Breese,K., Boll,M., Alt-Morbe,J., Schagger,H. and Fuchs,G.
  TITLE     Genes coding for the benzoyl-CoA pathway of anaerobic aromatic
            metabolism in the bacterium Thauera aromatica
  JOURNAL   Eur J Biochem 256 (1), 148-154 (1998)
   PUBMED   9746358
REFERENCE   2  (residues 1 to 201)
  AUTHORS   Egland,P.G., Pelletier,D.A., Dispensa,M., Gibson,J. and
            Harwood,C.S.
  TITLE     A cluster of bacterial genes for anaerobic benzene ring
            biodegradation
  JOURNAL   Proc Natl Acad Sci U S A 94 (12), 6484-6489 (1997)
   PUBMED   9177244
REFERENCE   3  (residues 1 to 201)
  AUTHORS   Bendrat,K., Muller,U., Klees,A.G. and Buckel,W.
  TITLE     Identification of the gene encoding the activator of
            (R)-2-hydroxyglutaryl-CoA dehydratase from Acidaminococcus
            fermentans by gene expression in Escherichia coli
  JOURNAL   FEBS Lett 329 (3), 329-331 (1993)
   PUBMED   8365476
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013986.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01869.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Priestia megaterium"
                     /db_xref="taxon:1404"
     Protein         1..201
                     /product="BadF/BadG/BcrA/BcrD ATPase family protein"
                     /calculated_mol_wt=21869
     Region          <1..192
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 miahaallkg edgiltisgt gsisvginkd lqcacggwgh ilgdegsgyw ialqafiqmc
       61 reddyglpvs plskeilekl hyynipeikk fvysaskgei asfvpivvdq askgnelaqi
      121 ilikagehla qttlsvykkc hfhdnikvaa kgsiltnipl vrdtfvktik kykpdttfil
      181 kdtsstlgcy ylalksmnke s
//
LOCUS       WP_258023386             224 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein, partial [Escherichia coli].
ACCESSION   WP_258023386
VERSION     WP_258023386.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Wang,J., Hofnung,M. and Charbit,A.
  TITLE     The C-terminal portion of the tail fiber protein of bacteriophage
            lambda is responsible for binding to LamB, its receptor at the
            surface of Escherichia coli K-12
  JOURNAL   J Bacteriol 182 (2), 508-512 (2000)
   PUBMED   10629200
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024939.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13550.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>224
                     /product="phage tail protein"
     Region          <1..>224
                     /region_name="COG4733"
                     /note="Phage-related protein, tail protein J [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443767"
ORIGIN      
        1 rcmpvwngqt ltfvqdrpsd kvwtynrsnv vmpddgapfr ysfsalkdrh navevnwidp
       61 dngwetatel vedtqaiary grnvtkmdaf gctsrgqahr aglwliktel letqtvdfsv
      121 gaeglrhvpg dvieicdddy agiriggrvl avnsqtrtlt ldreitlpss gttlislvdg
      181 sgnpvsvevq svtdgvkvkv srvpdgvagy svwglklptl rqrl
//
LOCUS       WP_258023437             373 aa            linear   BCT 02-MAR-2025
DEFINITION  replication protein RepA [Pseudomonas aeruginosa].
ACCESSION   WP_258023437
VERSION     WP_258023437.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 373)
  AUTHORS   Basu,A., Chawla-Sarkar,M., Chakrabarti,S. and Das Gupta,S.K.
  TITLE     Origin binding activity of the Mycobacterial plasmid pAL5000
            replication protein RepB is stimulated through interactions with
            host factors and coupled expression of repA
  JOURNAL   J Bacteriol 184 (8), 2204-2214 (2002)
   PUBMED   11914352
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016670.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04796.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..373
                     /product="replication protein RepA"
                     /calculated_mol_wt=41271
     Region          144..296
                     /region_name="RPA"
                     /note="Replication initiator protein A; cl19398"
                     /db_xref="CDD:473167"
ORIGIN      
        1 martegrcrp lcqqqrclsl iaaipqakvq gsmmrslgnl ldagvaeata krdplawikq
       61 kaaevaerae qrdaahavtp rvrhlideav eleieqarsa gatgyiahfl aqatlphtdp
      121 ktnyfergtg kltlsitanp khgvpygglp rlllawmcte avrtgspels lgrsqaeflq
      181 kldlhndgry iarvrdqslr lvrslisvsg adgdalgien iliakraflf wntrdteqpg
      241 lwdssitlst dffeslthap vpirmealqa lkksplamdi ytwlvyrmfs lnvattkggk
      301 rlaqvpwagl mmqfgsgyad tqqgmrdfkk sfrkrlkeal lfypeaashi eetkdhlilt
      361 parlhiaatk kkg
//
LOCUS       WP_258023461              29 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6316 family protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258023461
VERSION     WP_258023461.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039725.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19837.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..29
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..29
                     /product="DUF6316 family protein"
     Region          <2..27
                     /region_name="DUF6316"
                     /note="Domain of unknown function (DUF6316); pfam19837"
                     /db_xref="CDD:466202"
ORIGIN      
        1 tgtldgpyft rfdaereida yirrmrqsa
//
LOCUS       WP_258023467             218 aa            linear   BCT 02-MAR-2025
DEFINITION  T6SS immunity protein Tli4 family protein [Pseudomonas aeruginosa].
ACCESSION   WP_258023467
VERSION     WP_258023467.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 218)
  AUTHORS   Lu,D., Zheng,Y., Liao,N., Wei,L., Xu,B., Liu,X. and Liu,J.
  TITLE     The structural basis of the Tle4-Tli4 complex reveals the
            self-protection mechanism of H2-T6SS in Pseudomonas aeruginosa
  JOURNAL   Acta Crystallogr D Biol Crystallogr 70 (Pt 12), 3233-3243 (2014)
   PUBMED   25478841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037813.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18426.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..218
                     /product="T6SS immunity protein Tli4 family protein"
                     /calculated_mol_wt=24931
     Region          70..>110
                     /region_name="Tli4_C"
                     /note="Tle cognate immunity protein 4 C-terminal domain;
                     pfam18426"
                     /db_xref="CDD:436493"
ORIGIN      
        1 meakiplaki yehdlgipds hilgsknipf hvllwrnqrv yyftfskpte nsaqrikdli
       61 arfrtrelye vpnepgicfp ygfiaddgkt ayelknslrf trtpnvifsl ltasandpwq
      121 trptsglyds dfrpgydrqk wkksalldsl higkrlaafe gwrldprpds gererawfgl
      181 ahtggtldpl vaiqvqtfqk gtddltdytr ttkkycpa
//
LOCUS       WP_258023469             277 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258023469
VERSION     WP_258023469.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..277
                     /product="ABC transporter substrate-binding protein"
     Region          <2..260
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 vgegqitlnp rpadldalkk dpnlnlpsqa gfnlgyiayn vthkpfdkle vrqaldmavn
       61 kkaiidavyq gagqlasngm pptqwsydet ikdapydpak arellkkagv aegteitlwa
      121 mpvqrpynpn aklmaemlqn dwakigikak ivtyewgeyi krakggehda mligwsgdng
      181 dpdnwlgtly gcdavdgnnf skwcdagydk lvkdakrttd qgkrtelykq aqhilkeqvp
      241 itpiahstvy qpmrktvhdf rispfglnsf yevsvgk
//
LOCUS       WP_258023478             157 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258023478
VERSION     WP_258023478.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 157)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>157
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          <6..>147
                     /region_name="vgr_GE"
                     /note="Rhs element Vgr protein; TIGR01646"
                     /db_xref="CDD:273730"
ORIGIN      
        1 parrtalhsy qptythrhpq hvyycqmsld vqpgslslnd ydfqrpgtrl evrsnvgrah
       61 aaadyplydy pgeyvqsqdg ehyartriea iqtqyervrl rgcargigag hlihlsnytr
      121 ldqnreylvi ddeyrvvqer detgtggsrg pvgsgpr
//
LOCUS       WP_258023493             112 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258023493
VERSION     WP_258023493.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 112)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>112
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
     Region          3..112
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(84..87,89)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381101"
ORIGIN      
        1 mshalsltid larlkvamly dsrllvtaqc kdwlgvvvsd irmpgidgme llrqlheqda
       61 dlpvilitgh gdvplavqam rggtydvlek rvhrdamlds vrlglavrrl vl
//
LOCUS       WP_258023496              42 aa            linear   BCT 02-MAR-2025
DEFINITION  colicin E3/pyocin S6 family cytotoxin [Pseudomonas aeruginosa].
ACCESSION   WP_258023496
VERSION     WP_258023496.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 42)
  AUTHORS   Carr,S., Walker,D., James,R., Kleanthous,C. and Hemmings,A.M.
  TITLE     Inhibition of a ribosome-inactivating ribonuclease: the crystal
            structure of the cytotoxic domain of colicin E3 in complex with its
            immunity protein
  JOURNAL   Structure 8 (9), 949-960 (2000)
   PUBMED   10986462
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020569.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09000.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..42
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..42
                     /product="colicin E3/pyocin S6 family cytotoxin"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /GO_function="GO:0043022 - ribosome binding [Evidence
                     IEA]"
                     /calculated_mol_wt=4781
     Region          5..>42
                     /region_name="Cytotoxic"
                     /note="pfam09000"
                     /db_xref="CDD:401084"
ORIGIN      
        1 myyypapatl pafpdalrak pktsipgsve mrshwkdrre yl
//
LOCUS       WP_258023500             129 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258023500
VERSION     WP_258023500.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>129
                     /product="phosphopantetheine-binding protein"
     Region          <44..94
                     /region_name="entF"
                     /note="enterobactin non-ribosomal peptide synthetase EntF;
                     PRK10252"
                     /db_xref="CDD:236668"
ORIGIN      
        1 elaealadcd reavltlley psqpttaaqa ddsvdlrrvl tfvsrvlgrp laadqgfasa
       61 gghsllgvqa iaewrrltgr qlrlallhgd pddrevvrhs haadsrassh ctvtaltltv
      121 qrrgnhcqr
//
LOCUS       WP_258023506              84 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258023506
VERSION     WP_258023506.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 84)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 84)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>84
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          1..>84
                     /region_name="VgrG"
                     /note="Uncharacterized conserved protein VgrG, implicated
                     in type VI secretion and phage assembly [Intracellular
                     trafficking, secretion, and vesicular transport, Mobilome:
                     prophages, transposons, General function prediction only];
                     COG3501"
                     /db_xref="CDD:442724"
ORIGIN      
        1 hdgsrrhfhg ivaacsqgpg ngqfasyqvt lrpwlwlltr tsdcrifqnq kvpdiikqvf
       61 rdlgfsdfed alsrsyrewe ycvq
//
LOCUS       WP_258023510              84 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258023510
VERSION     WP_258023510.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 84)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 84)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>84
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          1..>84
                     /region_name="VI_Rhs_Vgr"
                     /note="type VI secretion system Vgr family protein;
                     TIGR03361"
                     /db_xref="CDD:274542"
ORIGIN      
        1 qpgtftlwqd grparyvhgi vshftqgssc frrtryelll epqlarlelc cnwrifqeks
       61 vpeilqallk ehrvldyeqr iyhe
//
LOCUS       WP_258023556             753 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Pseudomonas aeruginosa].
ACCESSION   WP_258023556
VERSION     WP_258023556.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14559.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..753
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=82152
     Region          182..>340
                     /region_name="decahem_SO"
                     /note="decaheme c-type cytochrome, DmsE family; TIGR03508"
                     /db_xref="CDD:274618"
     Region          <314..>420
                     /region_name="NrfA-like"
                     /note="cytochrome c nitrite reductase and similar
                     proteins; cl42459"
                     /db_xref="CDD:478214"
     Region          <474..>548
                     /region_name="HEAT"
                     /note="HEAT repeat [General function prediction only];
                     COG1413"
                     /db_xref="CDD:441023"
     Region          493..518
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          578..708
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          580..608
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(581,584..585,588..589,591,615,618..619,622..623,
                     625..626,649,652..653,656..657,660)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          613..643
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mqpvpprrea hqprpprsag ycagllwita lpllpavats etdglveesv cqtcharqse
       61 qwrgshhqla mqpanpgsvl gdfadarfsh agettrfyrk gdgfwvntpa adggnadfqv
      121 rytfgveplq qylldtgdgh lqalgvawdt rrkawfhlyp dervdarhpl hwskpqqnan
      181 fmcmechntg fernhdaasg rfdsrwlasg vgcqschgpa aahlawtrqp drreahagfa
      241 gslaatanra qvescarchs rrsplsdgfd atarllddyl psplgpvlye ldgkirdevf
      301 eygsfvqsrm yakgvacsdc hdphgarlka ngndvclqch nptgravrsd iddsglvaad
      361 yssrehlrhr pegpagkcva chmpgkyymv ndlrhdhsfs vpnpaqalal gvpdacvgch
      421 armpgaslve rfrnwypnai prdggyaqdl alvrdgrpga aaallrqllr sdlpairrat
      481 llgevpgypg qpllrqalaa lgekdpqvre aaigavatll sptervepia pslndpvrav
      541 rlsaayallp aiaelgthgt awrraideye gaqlvqrera eanlnlanly radgrsglve
      601 aslrealrrd adfaparval gqwlenagrd seavtllheg irrqpqsgll hyarglalir
      661 qgkreaarqa laealaaepd nprypyvlav awhetgqpdk aietlralla rrpaeraarl
      721 aladylrqag daagadavlv elrainpddp lfr
//
LOCUS       WP_258023563            1090 aa            linear   BCT 02-MAR-2025
DEFINITION  tape measure protein [Pseudomonas aeruginosa].
ACCESSION   WP_258023563
VERSION     WP_258023563.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040129.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20155.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..1090
                     /product="tape measure protein"
                     /calculated_mol_wt=116203
     Region          <23..>186
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          175..866
                     /region_name="HI1514"
                     /note="Phage tail tape-measure protein, controls tail
                     length [Mobilome: prophages, transposons]; COG3941"
                     /db_xref="CDD:443141"
     Region          <926..>1032
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
ORIGIN      
        1 manpmqrliq fvlrgrdels paaqqsteal eglrttaanl nqqlddakga rglvtalgtt
       61 eraiaqtqts vqrvdrtiad lrealdrnpg srglavslqi aerdaaglrr tldqltarha
      121 eqqraaraag vdtgqlanee rrlasvvdnt resiaqnsre ireleraqmr aareaaghts
      181 rvtalreams sgvrqaaaya aafvgiqaal nlvrrgiglv rdgivsmltt gdqfenlqnr
      241 ltslmgsvae geratawikt fakdtplqlg dvtdafallk aygldpmdgs lkaiedqsek
      301 lgggmerleg ittavgqawa kqklqteeil qlvergvpvw dmlakvtgkn aaqlqdlask
      361 gklgrdvika lvdemgrsse gaaakamstl tglvsnlgdt aadflnrian agaldhvknk
      421 lkelgdtiaq mdqdgrldtl akglsdafvq gsewverfik rladvdfgtl idktsawlss
      481 fstqlddmas rvqlfiapfr tlfngvtsgi saialawtgt lslmvagiek vaekipaalg
      541 gerirssvag vhdllssmse gfrqqiqqda qdiadawdts ttatasaaqq qsqaitdtft
      601 dlkagaksaa aesvqavtsl qnaldqisaa ktteqltalq gemlkayqag tlsqqeyang
      661 agvlnaklte lkstasgaal gvsdlstgle nlkqvqdais sakttvdiqn irtalsrlyn
      721 dgtisarefn qeqtklsakv kelkaageeg akgmqavaes sdkaakslsd qrkaigesme
      781 atrkgvastk ddmgafegff ggvlstarqg vaqlsqealn afdamrgist vdlsidtssl
      841 datsrslakv seqlarikae sgvgmsgfgr wamdtqrasl eiqaayleqk rslqslmddy
      901 ergtmklgdf vsaakgarng lsllndsdmr qlesaieaan qkiqqlkegs kstlvslree
      961 laglrgeqea vdrsrfnsrr aelqqqlaea qgsgdmnavq nlmtalatlq qiqaetdakr
     1021 qreeqqkrvd eqsaakaaaa ppasspvssp pprvvrfetp rgavdvavas eqdetnllgv
     1081 leqasmrtgr
//
LOCUS       WP_258023573             292 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258023573
VERSION     WP_258023573.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 292)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>292
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..>292
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation (C) domain of non-ribosomal
                     peptide synthetases(NRPSs) and similar domains including
                     the C-domain of SgcC5, a free-standing NRPS with both
                     ester- and amide- bond forming activity; cd19531"
                     /db_xref="CDD:380454"
ORIGIN      
        1 syaqqrqwfl wqlepdsaay hipaalrlcg eldvealkrs faalverheg lrttfrqegg
       61 etlqvvhdrl pleireqslg vadeaalmar ieeevrvpfd lergpllrvl llrlsaeeqv
      121 lvvtlhhivs dgwstpimve elmqfyagyr egravelepl piqyadyalw qrswmeager
      181 erqlaywrqq lggeqpvlel ptdrprpsvq spagdslqve lgedlgrslk qlaqqqgvtl
      241 fmlllasfqt llhrysgqpe irvgvpianr trveterlig ffvntqvlka df
//
LOCUS       WP_258023577             143 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258023577
VERSION     WP_258023577.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>143
                     /product="Ig-like domain-containing protein"
     Region          46..114
                     /region_name="Big_6"
                     /note="Bacterial Ig domain; pfam17936"
                     /db_xref="CDD:465576"
ORIGIN      
        1 sftpgtplcn gtlitavsqd aagttsghvi ttvdavavaa plidpsngve lsgtaepgvr
       61 viltdgngnp igqtladgsg nwtftqctpl vngtvvkava eyaecntsgt asatfasvtq
      121 dktftsdsdc drrlgthdda tav
//
LOCUS       WP_258023581             136 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258023581
VERSION     WP_258023581.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 136)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>136
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          22..>134
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            70..103
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 vahnaeaaag aaesadgnvs vgqevvrqtl erierlseav raatasveal sadsqrigsv
       61 ldviksvaeq tnllalnaai eaaragaqsr gfavvddevr alarrtqqst aelesmicdl
      121 qngtqqevqr mqsshq
//
LOCUS       WP_258023589             126 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258023589
VERSION     WP_258023589.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>126
                     /product="Ig-like domain-containing protein"
     Region          <1..>118
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 vvisgtaeag atviltdgng npigqftadg sgnwaftpat plangtvina laqdaagnns
       61 sptsatvdsl apaapvidps ngsviagtae agateiindc dgnamcqcna vcsgvrsvtd
      121 gttlsn
//
LOCUS       WP_258023753             154 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Streptomyces bambusae].
ACCESSION   WP_258023753
VERSION     WP_258023753.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces bambusae
  ORGANISM  Streptomyces bambusae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Streptomyces bambusae"
                     /db_xref="taxon:1550616"
     Protein         1..154
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=17388
     Region          10..147
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 marsytshya dvhlllrqgd eilmsrrrqq qvfpgmwqvp aglmeepepa raaaarefte
       61 etsatvdpfd lrfvhlmhhv stgsgsrria fffetdrwhg signpepdky egwqwyktsg
      121 lpeplppyla valqhiadgt pyseyawpan tala
//
LOCUS       WP_258023851             508 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaB-like helicase N-terminal domain-containing protein
            [Streptomyces bambusae].
ACCESSION   WP_258023851
VERSION     WP_258023851.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces bambusae
  ORGANISM  Streptomyces bambusae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 508)
  AUTHORS   Fass,D., Bogden,C.E. and Berger,J.M.
  TITLE     Crystal structure of the N-terminal domain of the DnaB hexameric
            helicase
  JOURNAL   Structure 7 (6), 691-698 (1999)
   PUBMED   10404598
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012974.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00772.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Streptomyces bambusae"
                     /db_xref="taxon:1550616"
     Protein         1..508
                     /product="DnaB-like helicase N-terminal domain-containing
                     protein"
                     /GO_function="GO:0003678 - DNA helicase activity [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /calculated_mol_wt=54665
     Region          26..>248
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Region          211..507
                     /region_name="RepA"
                     /note="RecA-family ATPase [Replication, recombination and
                     repair]; COG3598"
                     /db_xref="CDD:442817"
     Site            218..225
                     /site_type="other"
                     /note="Walker A motif"
                     /db_xref="CDD:99707"
     Site            219..226
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:99707"
ORIGIN      
        1 mdesrpyaph hsndqhqppv dvtavpphdv raeaavlgac mhdaavidav rnlldgpdfy
       61 rpahetvwra vlalrsedkp tdpivlgdrl rdqgdlervg gatylhqlad atpsvggavw
      121 yaeivrkkad lrrlrtsglr tvqrtmepga dpdairseve sevrserera lasgqgrlar
      181 fitdgwsfvt etgadteplw gtreqtawss geslmivgap gvgkttlahq vvlgrlglad
      241 svldmpvaps krvlylaldr ykqiaralar riqpehesri rdglavwqgp lpatldkepd
      301 lladlaaahq adtividslk davstlvdda lgvaynnarq ramragvevl elhhqrkase
      361 ntpraqkptl drvygstwiv sgagsvlyva geagdlavtv hhlktptgei gplqvihdhe
      421 rgtssvdpal dpvqilrtrp dgltvrelaa vqsgetnpdr aatekarrtl drlvkaglat
      481 kaegaaggtg ggqqaryras vrhigavs
//
LOCUS       WP_258023975            2931 aa            linear   BCT 02-MAR-2025
DEFINITION  SpvB/TcaC N-terminal domain-containing protein [Streptomyces
            bambusae].
ACCESSION   WP_258023975
VERSION     WP_258023975.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces bambusae
  ORGANISM  Streptomyces bambusae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 2931)
  AUTHORS   Waterfield,N.R., Bowen,D.J., Fetherston,J.D., Perry,R.D. and
            ffrench-Constant,R.H.
  TITLE     The tc genes of Photorhabdus: a growing family
  JOURNAL   Trends Microbiol 9 (4), 185-191 (2001)
   PUBMED   11286884
REFERENCE   2  (residues 1 to 2931)
  AUTHORS   Lesnick,M.L., Reiner,N.E., Fierer,J. and Guiney,D.G.
  TITLE     The Salmonella spvB virulence gene encodes an enzyme that
            ADP-ribosylates actin and destabilizes the cytoskeleton of
            eukaryotic cells
  JOURNAL   Mol Microbiol 39 (6), 1464-1470 (2001)
   PUBMED   11260464
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03534.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2931
                     /organism="Streptomyces bambusae"
                     /db_xref="taxon:1550616"
     Protein         1..2931
                     /product="SpvB/TcaC N-terminal domain-containing protein"
                     /GO_component="GO:0005737 - cytoplasm [Evidence IEA]"
                     /calculated_mol_wt=312736
     Region          85..>246
                     /region_name="SpvB"
                     /note="Salmonella virulence plasmid 65kDa B protein;
                     pfam03534"
                     /db_xref="CDD:427354"
     Region          823..>1621
                     /region_name="RhsA"
                     /note="Uncharacterized conserved protein RhaS, contains 28
                     RHS repeats [General function prediction only]; COG3209"
                     /db_xref="CDD:442442"
     Region          1356..2627
                     /region_name="RhsA"
                     /note="Uncharacterized conserved protein RhaS, contains 28
                     RHS repeats [General function prediction only]; COG3209"
                     /db_xref="CDD:442442"
     Region          2695..2830
                     /region_name="PT-HINT"
                     /note="Pretoxin HINT domain; pfam07591"
                     /db_xref="CDD:400120"
ORIGIN      
        1 mtvqrvvrgr tgvtvilamv ltmsglsspe llrstaatvp dvgsavtgpe gpegtsfnpn
       61 qikdikaadp gsgvnlveap sannsgdarl syplevpkgr aglepklavt ynssgtngwl
      121 gvawdlstpm vtvdtrwgvp rydagletet yllggeqltp vahrselqar taekvfhsrv
      181 egsfdrivrh gdspanywwe vtdkqgvrtl fggtadstlt dgkgrvatwa arevrdgndn
      241 vlryryakva dggtagsmvp gsdlypqkit ytgrgdtdgr ysvtfirdre rdeprradvr
      301 idakygfkkv tadllrrvev klddqliray elnyrtgafa ktlltsvsqf sesnqlfnth
      361 tfdyfddvrd psgsyntfad aagwsvpddd lgvniregea saisantsag fgahlfagyn
      421 vqglttkegs vglkvgfsag qsdglstltd vngdnlpdkv frknndvfyr pnlarpggep
      481 kfgdtpvklt nlpgistert lsgtigvesy vlttsaqldf vgttttsdrf fsdvngdgia
      541 dlvnnggvlf gyldaqgqpa ysadssrtpv pvgggavtge ivgdqtaqfn qqvdnsplld
      601 tvrrwvapfd gnvrvdgrvq ltqdpspara aytkadgvrv tiqhkdaelw aqrigpddht
      661 eftpgnvasi pvkkgdalyf rtqsildgky dtvawdpeit ytdlpagtda nglantvfra
      721 sadftfggrp slvtvpvngt lrltgdvvks katsddvtvv iekgngvhpg aevfrkvlpa
      781 astgttaidv sipvsmfekm swklktdspi dasavswapk ahytaaqgve svvdakgdpt
      841 lvitppydmt mypantltap qqsykatktg qlkvrpkvsl nfgffgdani altvkkrgge
      901 llgkrifqak dlspfggpnl dltvpvtagd elyidystad trllgslieq sasvtydvts
      961 swptftpaps amhgsvgqga faqpyrgwgv igyqgnrdra tqplkqaelt ldqsfkdalp
     1021 kepkeadvpv faadprltmp rlavfapvpa kggwaaqdes swvtaamats srlgadtidi
     1081 vtdadvagdr avmrrgvtgq vsatlaagpf ggtvvggita gsvdyldlng dgypdvvgak
     1141 eiqfsdmtga lgatrgtlgg nvreadnvsg nvslsagset atiasalgma apdagtsant
     1201 attgavqpsl giggslggge sdvrvdlmdi ngdglpdkvf gngdaqlnlg ysfaarepws
     1261 agpindastr nvgvnlgfnv drygfaggvs aelgtsytna smtdvngdgl tdrvftdgan
     1321 pikvavntgt gftapapfrg sfpdiavdkn aslgggvyft vglptpvgvf vfnpgvnast
     1381 gvsraetslr dvngdgladh vkstrddell vavnktgrtn llrsvsrpmg aridldytrs
     1441 gntadmqesr wvlsrtsvfd glagdgadts lttfryeqgr ydrlereflg fgrvvtedrd
     1501 tgtddavrrt vtdeyrtdgy vsrglltrtl tedgaghpyr etlntyrlld tstdqeadpk
     1561 srtatvfpql trveerhyeg aatagkstft dlsydgygnv irtfdagdeg taddletafa
     1621 ysgsdtqcrd rnlvgtanvv rqkaaatgal lrhrestvdc atgavrqvre yldddtpaas
     1681 dltyhpdgnl ksvtgpanak gqrykleygy dttvgvhves vedsfgyrss taynlkygqp
     1741 erntdqngqp lrmsydsvgr ldkvtgpyek dgdqatitfg yhpeatvpya ttkhldraaa
     1801 gvrddtidtv tfadglkrvl qtkkdasvsa spgatptqvm tvsgrlkfdh lgravekyyp
     1861 vtedkgaant tfnasfdtva ptkdtfdvld rsvrtvqpdg vtistgygfg qdragttrfe
     1921 rtvtdgngke rrtytdvrga vtsvkefngs saiwtsyayd ptgqvttitd dknnvtragy
     1981 dalgrrtsfd spdagrsetr ydlagnvtsk itanlraadk aveydyeysr lkairyptfp
     2041 ennvsyeyga pgapdnaasr vtevhdaagt vqraygplge viketrtita vrdaprtytt
     2101 awrydafnrv lemtypdgev ltyaydsggq vgratgskng tgytyldrid ydkfgqkilq
     2161 qtgngvrtty tydaedrrla alksvepggt afqnlgytyd kignitslan napqggdigg
     2221 pssqtygydd qyrltsasgr ytdknnavnt ytlslgydsi hnttsksqth evtggtpafp
     2281 vggggagpie pvedpsnpsd vqdrttyayt yayagarpha ptkvgpidha ydangnligt
     2341 vntavadkrr qyvwdeenrl vcnqdtatgt ltqdpsgcag atvsyvyddk gdrvvkrsdd
     2401 glslypnryy serdttgykh vfvgdgrvtt kavattgped aqqffhadhi gssgyvtdkq
     2461 gkvtehleyf pygetwveer tgqadtpyqf tgkeldaetg lyyygaryyn prtqlwastd
     2521 pvlpdyldgd maggiaeprn laaytythnn pvkltdptgk wpkmpswkti ghttldvvgm
     2581 vpvvgevgdl anagwyaaeg dyvnaglsaa saipgagyaa naakygnkal daaqaaknan
     2641 naadaattak aaetapvpka adsppapkpa dsgsapkaad pgagtcnsft pdtgvvmadg
     2701 nhkaieqvrv gdevtatdpv tgetgprtvt alitgegekn lveitvtnag ehsgkvvatd
     2761 nhpfwapelg kwlyakeivp gtllqtgngt ytqvsavraw tqhkrvhnlt vddlhtyyvl
     2821 agstpvlvhn cnismgeavs rgaahvddna tvvrsgsggv qfmsttvdda gnttrkiarf
     2881 dvnpnsahvq klgphlnlet qingktvtsg plkdphtaid pstirpgdyw p
//
LOCUS       WP_258024073             303 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Streptomyces
            bambusae].
ACCESSION   WP_258024073
VERSION     WP_258024073.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces bambusae
  ORGANISM  Streptomyces bambusae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 303)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 303)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 303)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 303)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Streptomyces bambusae"
                     /db_xref="taxon:1550616"
     Protein         1..303
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=32274
     Region          18..>266
                     /region_name="MglA"
                     /note="ABC-type sugar transport system, ATPase component
                     [Carbohydrate transport and metabolism]; COG1129"
                     /db_xref="CDD:440745"
ORIGIN      
        1 mgaqagggtr mtpantrttl vkltgvskyy gniralegvs levaageitc vlgdngagks
       61 tlikiisglh rhdagsfeie geetvlanpr aaldrgiatv yqdlavvplm pvwrnfflgs
      121 eptrgrgpfr rldvglmret traellrmgi dlrdvdqpig tlsggerqcv aiaravyfga
      181 kvlvldepta algvkqsgvv lkyvaaarda glgvvlithn phhahlvgdr fvllkrgvma
      241 gshtrdsitl deltrqmagg seldelshel arvaqspqgt gdtpydqaah rpadrtprde
      301 rda
//
LOCUS       WP_258024128             604 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5107 domain-containing protein, partial [Streptomyces bambusae].
ACCESSION   WP_258024128
VERSION     WP_258024128.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces bambusae
  ORGANISM  Streptomyces bambusae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028438.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17128.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Streptomyces bambusae"
                     /db_xref="taxon:1550616"
     Protein         1..>604
                     /product="DUF5107 domain-containing protein"
     Region          61..356
                     /region_name="DUF5107"
                     /note="Domain of unknown function (DUF5107); pfam17128"
                     /db_xref="CDD:407262"
     Region          <467..548
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          480..510
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          515..543
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mattvrravv tlpaaplgpe nplpallppv evhvldervr aglprdmarq igheplrsll
       61 pvrlldgygr eraladldav vlenahlrvt vlpglggrvh smvhvptgre llyrnpvfqp
      121 aafalngawf sggiewniga tghttlacap lhaalvpapd ggtmvrlwew erlrdlpfqv
      181 dlwlpedsay lyvgvrvrnp herpapvyww sntavpedag srvlapadet whfgyeralr
      241 rvplpgagpg aedgtyplrs typadffhev pdgarrwiaa ldaegrglvq tstdllrgrk
      301 lfvwgsgrgg rrwqewltep gtpgyaeiqa glartqlehv pleagaefsw leaygplaad
      361 pgqvhggdwa aartaaeral eealprelve aayaawrpya daepgerlad gsgwgalevl
      421 caghklpgtp fpestlgeaq apwlelwrtg vlpaprrvvp pgpslvaphw rdmletapad
      481 plteyhlgva qwhagdiaqa vrswerglpl apsrwpllrc lavaderagd pgravdryaq
      541 afedlaqesr ggeawthgca rlvrgggrwr apadgvefdr vavlrvalhr glhrlgrpve
      601 egeh
//
LOCUS       WP_258024136            1048 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein, partial [Streptomyces bambusae].
ACCESSION   WP_258024136
VERSION     WP_258024136.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces bambusae
  ORGANISM  Streptomyces bambusae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 1048)
  AUTHORS   Gao,G., Nara,T., Nakajima-Shimada,J. and Aoki,T.
  TITLE     Novel organization and sequences of five genes encoding all six
            enzymes for de novo pyrimidine biosynthesis in Trypanosoma cruzi
  JOURNAL   J Mol Biol 285 (1), 149-161 (1999)
   PUBMED   9878395
REFERENCE   2  (residues 1 to 1048)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
REFERENCE   3  (residues 1 to 1048)
  AUTHORS   Nygaard,P., Duckert,P. and Saxild,H.H.
  TITLE     Role of adenine deaminase in purine salvage and nitrogen metabolism
            and characterization of the ade gene in Bacillus subtilis
  JOURNAL   J Bacteriol 178 (3), 846-853 (1996)
   PUBMED   8550522
REFERENCE   4  (residues 1 to 1048)
  AUTHORS   Lollier,M., Jaquet,L., Nedeva,T., Lacroute,F., Potier,S. and
            Souciet,J.L.
  TITLE     As in Saccharomyces cerevisiae, aspartate transcarbamoylase is
            assembled on a multifunctional protein including a
            dihydroorotase-like cryptic domain in Schizosaccharomyces pombe
  JOURNAL   Curr Genet 28 (2), 138-149 (1995)
   PUBMED   8590465
REFERENCE   5  (residues 1 to 1048)
  AUTHORS   Jabri,E., Carr,M.B., Hausinger,R.P. and Karplus,P.A.
  TITLE     The crystal structure of urease from Klebsiella aerogenes
  JOURNAL   Science 268 (5213), 998-1004 (1995)
   PUBMED   7754395
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01979.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Streptomyces bambusae"
                     /db_xref="taxon:1550616"
     Protein         <1..1048
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
     Region          35..>534
                     /region_name="COG4946"
                     /note="Uncharacterized N-terminal domain of tricorn
                     protease, contains WD40 repeats [Function unknown]"
                     /db_xref="CDD:443973"
     Region          486..>590
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
     Region          605..1004
                     /region_name="HutI"
                     /note="Imidazolonepropionase or related amidohydrolase
                     [Secondary metabolites biosynthesis, transport and
                     catabolism]; COG1228"
                     /db_xref="CDD:440841"
ORIGIN      
        1 raggpgraaa aagpagdtvr lrlaaatnga atavgdrvva evqgvlwslp adgspatalt
       61 ppdleptrpv lspdggqlav aayrsgnfqi wlmgadgsgl rpltegpfdh rapawspdgr
      121 tlawcsergg dpvtgspyri wsqpasggap rrltglpgqq gpgqdgawed fdpawaadgr
      181 rvlfvrgtva gdgtltarll asaaadgsgp vrteytapeg rllapavspg grtawlcalp
      241 gprraetvtl wadgrrvpld gdlapapprw lgddrllvtv dgqfrvirpd gdtsgpepgr
      301 llafraelhl arprrrvkey dleaarprpv rgihlpslsp dgrtvafasl galwtapvag
      361 gaprrrvqlp ptayvqgpvw spdgralvyt hdrgglnavh rkelsggree alspggrvyg
      421 rlspdgsrla aldltgrllv relatstetp laaplggggl pgmpswspdg rylalcdrnr
      481 lshrfregyn lirivdaatg aarlhalaph tslsdryacg pvwspdgrhl acvaesalwl
      541 lpvgpdgtpa gparritdep aehpswsgds rtllyqcgsr lrllhltadg apdgpartvp
      601 valdhrrpap vdtlvrtgrf wdgtgappre dvdilirdgr iasveprrag rrgpraariv
      661 eagqgtvlpg lwdthvhpyg ntygarqgvt alaygitttv slggsaqeqa rlrqdvlagr
      721 laaprlltcg ehldgsrvay tmsrahrtre glarslarae eldwdvvkty vrapawlmae
      781 aarfahdrlg vpagshlcaa giaagqdltt hlvateraea ghgatprgha yqdtvelytr
      841 grfhliatpf talpllgedp aaaedervta lmppwdvaav raaaarppaa dqllalerem
      901 avyrrilggg glvalgtdap lvpvglhlhl alralhrygl spaealatat ripaqvfglq
      961 drlgtalpgr iadltvvdgd pftdfaelir vraailggtv heraalvqef tghhdtaava
     1021 pepeggwhav trrllrdscc ggadgpvg
//
LOCUS       WP_258024200             524 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase [Streptomyces bambusae].
ACCESSION   WP_258024200
VERSION     WP_258024200.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces bambusae
  ORGANISM  Streptomyces bambusae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 524)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 524)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Streptomyces bambusae"
                     /db_xref="taxon:1550616"
     Protein         1..524
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=53471
     Region          3..429
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mgivagldss saftrivvcd tdtgavlrqg yaphpqpagd anphetdpqa wllslgeaag
       61 ggllegvqai gvsaqqhgll aldaqgapvr palvgndkrg qvaaadladk fggrqawtea
      121 vgsvpqsaqp iaklawlarn epeaarrvam vmsphdwlvw qllgrparrt tdrggasgtg
      181 wwsaatgsyr pdlvelalgh ravlpevlgp adaagttpeg llisagtget maaalglglg
      241 pgdavvslga sgsvmavhhe alseptglit sladaaglhl pvvnvsnavr alrgtadllg
      301 tdleglsdla lkstpgahgl vllpyleger tpnlphtagt lsglrrdsmk pehlaqaafe
      361 gmlcglvdal dvlrtrgvei rrvfllgaaa elpavakaap glfgtqivvp apadyaalga
      421 arqaawalgv hqgtlaphtp pvwpapashv fepgeelpvw qavrqqyvtt reqihpgafa
      481 aapapvapaa ppapaaftpp pspsgfpdfp glpgfpdlpd fpra
//
LOCUS       WP_258024323            1537 aa            linear   BCT 02-MAR-2025
DEFINITION  HEAT repeat domain-containing protein [Streptomyces bambusae].
ACCESSION   WP_258024323
VERSION     WP_258024323.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces bambusae
  ORGANISM  Streptomyces bambusae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025030.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13646.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1537
                     /organism="Streptomyces bambusae"
                     /db_xref="taxon:1550616"
     Protein         1..1537
                     /product="HEAT repeat domain-containing protein"
                     /calculated_mol_wt=164510
     Region          8..>556
                     /region_name="EntF2"
                     /note="Thioesterase domain of type I polyketide synthase
                     or non-ribosomal peptide synthetase [Secondary metabolites
                     biosynthesis, transport and catabolism]; COG3319"
                     /db_xref="CDD:442548"
     Region          <335..707
                     /region_name="COG3903"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443109"
     Region          <760..1361
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
ORIGIN      
        1 mpedkpflda vrradvgwla ghldarlclp avfgrlighd dprlrhlglv llaervtsgp
       61 tgveaemael aqllpvsveg tpeaalvlag lyerlgphlq grpwpswrta glpvpvriaw
      121 lraellnepa vireeprgel lyqavrdvav tcvhrieplv nelvdsgdav lqaaalrlar
      181 qglhagllap arvraclvgl lgadsadvva avldelalpw avldplrael lpffltadav
      241 tarpevaraa ltaaarhghr gllrqvvdgp dlppglrrrg mellgdladr gdiggvtaia
      301 vrdpllfggp avtclrglhr rgqflddphd vlsviglala dhsippheva tilytcrqea
      361 frvlvdaaad dpswrrrlal lvalagqgag dlpigdvitr vlpsapapgp fldairalrh
      421 teaedavial lpsvpaaald aleaigghrt atalreglgl aveesarviv phlrpvrnra
      481 levlwhltqd paqrravlvr ldpadlptri aadlggpder elallsshld pdepvaalcr
      541 lathggagtl pviedlllhi vadlvvsrea aepvvpqevl davhglgrrl hgrrrirpsc
      601 lldaataeea ghalvattal nlldrpglaa aeqtillell lrapyagtra rvhrllrhrd
      661 rhvrkhvial lardatgdda qalsatlial ttaqdvqtvr qallalghae arwaataiaa
      721 cldhpnmnik ktaagvlara gtpaavptll fwlgrhdnpg lrgsltealr ailgdayaat
      781 vlaaaehvea grardllleg ldgtlparsv laldhqaspv aapllalvat grvrlasgtv
      841 eelstamaeh gitpaegrgq aadiaadldv galsakgwnp svalriaarh elpdatrlrg
      901 lrpmlpdwlr lagcepaara rvlrvvlrlc papwttgela afarftdvll dglaeasagd
      961 rrdlfavlea vaptlpavek pavvdavral ppapggrpvl allrglgavl vradldqala
     1021 sarleadplq aetavlrdaf gvpqspaats padadahada dadartaawr aalhaavrtp
     1081 saleqfrrlc rppyeavags rdrlralidv yssagaeira alidwmtdlq pldappwtia
     1141 etahaptppp rtvhvddldq prstalrerl lamlqasvpe hrrtaalall ewpepearip
     1201 vlraflrgri dvpvgvdlar tlyaiggtel raddvrhdrv alvasrldpw dmeplvplll
     1261 ewwehdspss ssaagralrr fpadvlaqrl adrldagawg fldllrgrpl lrtpaltrtc
     1321 rrlraegrdd ladglllveg plrrpeaarq datvlaalrd rapyaaaaaa qppsrqqlvd
     1381 eartgdplri rralaqlaeg hrgpepdpdp glrdligell rhprpkvrlh ahrtsrvmld
     1441 rqtylhhtsi llddpqpdlv rtailtlcha nwtpaipalt gmlehshpav rtavtkglid
     1501 mggpvipalr haaaharpdk rslyeevler ittaasr
//
LOCUS       WP_258024339             216 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5819 family protein [Streptomyces bambusae].
ACCESSION   WP_258024339
VERSION     WP_258024339.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces bambusae
  ORGANISM  Streptomyces bambusae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040205.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19136.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Streptomyces bambusae"
                     /db_xref="taxon:1550616"
     Protein         1..216
                     /product="DUF5819 family protein"
                     /calculated_mol_wt=23793
     Region          55..216
                     /region_name="DUF5819"
                     /note="Family of unknown function (DUF5819); pfam19136"
                     /db_xref="CDD:465980"
ORIGIN      
        1 mdsndpegtv pgprpvgvag lstpyrvlva lalgavavaa cwhlalvflh vapsntlskr
       61 hartiddwiy pefeqnwklf apnplqqnva vqvraqvrdg agglvttgwr dltaqdtdai
      121 rhnplpshtr qnelrrawdf ytsshdeeek angergalse aylqriavrr lagtygggdl
      181 lriqlrgatt alpapawste qtdtatyyre lpwwtv
//
LOCUS       WP_258024600             133 aa            linear   BCT 02-MAR-2025
DEFINITION  SSI family serine proteinase inhibitor [Streptomyces bambusae].
ACCESSION   WP_258024600
VERSION     WP_258024600.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces bambusae
  ORGANISM  Streptomyces bambusae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 133)
  AUTHORS   Kato,J.Y., Hirano,S., Ohnishi,Y. and Horinouchi,S.
  TITLE     The Streptomyces subtilisin inhibitor (SSI) gene in Streptomyces
            coelicolor A3(2)
  JOURNAL   Biosci Biotechnol Biochem 69 (8), 1624-1629 (2005)
   PUBMED   16116298
REFERENCE   2  (residues 1 to 133)
  AUTHORS   Kim,D.W., Chater,K., Lee,K.J. and Hesketh,A.
  TITLE     Changes in the extracellular proteome caused by the absence of the
            bldA gene product, a developmentally significant tRNA, reveal a new
            target for the pleiotropic regulator AdpA in Streptomyces
            coelicolor
  JOURNAL   J Bacteriol 187 (9), 2957-2966 (2005)
   PUBMED   15838021
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012923.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00720.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Streptomyces bambusae"
                     /db_xref="taxon:1550616"
     Protein         1..133
                     /product="SSI family serine proteinase inhibitor"
                     /GO_function="GO:0004867 - serine-type endopeptidase
                     inhibitor activity [Evidence IEA]"
                     /calculated_mol_wt=13498
     Region          4..133
                     /region_name="SSI"
                     /note="Subtilisin inhibitor-like; cl11594"
                     /db_xref="CDD:448320"
ORIGIN      
        1 mgltaltala gtgvadaata gqeslyapsa lvlavtagpd adegtvlrav tlvcapgrgg
       61 thpapraaca elrragaefd sittppvtgp cskewdpmtv tavgvwegrr idyehtfanr
      121 calrrgsgvl faf
//
LOCUS       WP_258024628             125 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6193 family natural product biosynthesis protein [Streptomyces
            bambusae].
ACCESSION   WP_258024628
VERSION     WP_258024628.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces bambusae
  ORGANISM  Streptomyces bambusae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 125)
  AUTHORS   Smith,L., Hong,H., Spencer,J.B. and Leadlay,P.F.
  TITLE     Analysis of specific mutants in the lasalocid gene cluster:
            evidence for enzymatic catalysis of a disfavoured polyether ring
            closure
  JOURNAL   Chembiochem 9 (18), 2967-2975 (2008)
   PUBMED   19025863
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039374.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19692.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Streptomyces bambusae"
                     /db_xref="taxon:1550616"
     Protein         1..125
                     /product="DUF6193 family natural product biosynthesis
                     protein"
                     /calculated_mol_wt=13180
     Region          15..121
                     /region_name="DUF6193"
                     /note="Family of unknown function (DUF6193); pfam19692"
                     /db_xref="CDD:466147"
ORIGIN      
        1 mseamadktp ahaaevvaeq wravlgygpd airpamveaa yaqprlrely pslshgilll
       61 srwtgyppdr avpavhpvag ggyqitrhge grlgetatae eayalvvahl percgpavig
      121 teadl
//
LOCUS       WP_258024720            2524 aa            linear   BCT 02-MAR-2025
DEFINITION  polymorphic toxin-type HINT domain-containing protein [Streptomyces
            bambusae].
ACCESSION   WP_258024720
VERSION     WP_258024720.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces bambusae
  ORGANISM  Streptomyces bambusae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 2524)
  AUTHORS   Zhang,D., Iyer,L.M. and Aravind,L.
  TITLE     A novel immunity system for bacterial nucleic acid degrading toxins
            and its recruitment in various eukaryotic and DNA viral systems
  JOURNAL   Nucleic Acids Res 39 (11), 4532-4552 (2011)
   PUBMED   21306995
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019227.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07591.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2524
                     /organism="Streptomyces bambusae"
                     /db_xref="taxon:1550616"
     Protein         1..2524
                     /product="polymorphic toxin-type HINT domain-containing
                     protein"
                     /calculated_mol_wt=267511
     Region          971..2088
                     /region_name="RhsA"
                     /note="Uncharacterized conserved protein RhaS, contains 28
                     RHS repeats [General function prediction only]; COG3209"
                     /db_xref="CDD:442442"
     Region          1754..1865
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cl49609"
                     /db_xref="CDD:483949"
     Site            order(1761..1763,1774,1776,1783..1784)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(1839..1841,1852,1854,1861..1862)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Region          2257..2392
                     /region_name="PT-HINT"
                     /note="Pretoxin HINT domain; pfam07591"
                     /db_xref="CDD:400120"
ORIGIN      
        1 mspfsasnfr lpgnrrargr aarrvavtls alltvtllpa qawavgpgdr ngvslpglqq
       61 dkpvnldkda aaqlegwagk paeppaeyvp tevtpppaas tqvalggdql vqagtlpvai
      121 gkasptetnp tppapsgtws vavegrtate sagvdgaiik vtppvdaatp vdvqldykkf
      181 adlygtewas rlelkqlpec flttpdlpec ttsksvpstn dpatgtvrat vdpatspgmg
      241 mrtmavgstg pmvlaasdsa sgaggtykat slspsgswsa ggsgggfswt yplsvppapa
      301 gpapkiafsy ssqavdgkts asngqaswig dgwgyepgfv erryracsed rkagasgaan
      361 ndnttdkkks dlcwagdnmv mslggsttel vhdattgawi pasddgsrie rktgssngak
      421 dgeywvvttr dgtryhfglh dvdgagtrpa tnsvltvpvf gnhpgepcya ssyaassctq
      481 awrwnldyve dvhgnamvvd waqetnhyak nekfkekvsy vraghptqil yglrsdnlsg
      541 apagkveftv aerciaegqt kctdtefesk nyqdkqpwwd tpstlhckad akdcyvsspt
      601 fwsrkrltsv ttyaqrtegs tdlsavdrws laqsfpkqrs dthppmwles vtrtgyglkd
      661 pqgnqpstal ppvsflpnvv dmpnrvaksa tdatpdfdrl rvetirtetg getyvdysdp
      721 cpvgathpkp eenttrcypv hwspdgevek pplewfnkyv vdrvverdrv arqpdvvtty
      781 tyegdaawak etdefskpel rtynqwrgya svvvkkgvta nagkadateq smtrtryfrg
      841 msgdagraki tvkdstgaee lgedlpqyqg raaetitftk vggeivarel twpwsqktat
      901 rprdgttple afrsntsrtd aiqsisggrt gilrttntie ptyglvtste kagitsagsg
      961 lwtlsdqtcv tttyvhntdk hliglpervr ttagecpkaa iaamlsdtrt aydapnafgt
     1021 apvkglpyqv dtndaagtgw vttarneyda igratkvyda agtatstaft patgpafatt
     1081 vtnalghtat tkvdparatp lettdangrk vttaydnlgr ttavwtpsqk pgtdkaaqtf
     1141 eyqitehqpp vvtsstlrdn gtyaksltiy dgllrtrqtq tesiaggrli sdnlysangt
     1201 varsnaayyt qgapdakift pvesevpnst rtaydglgra vrvttfhedt pkysatsrye
     1261 gdwtlvrtgm netgdmplag sravrtstdv mgrttqihhy kttdltsqki taptaddanv
     1321 tsytydirgk lvkvtdpaln vwtytydarg rktassdpdm gdasfgydnl drpiwakdsa
     1381 graqyttydv lgrttalhed aadgplvaaf tfdtlpgakg kpvastrynd gkaytnevtg
     1441 ydteyrptgs kitipdtpat kglagtyays stytptgkvq ttslpatpgg laaerlvtry
     1501 naqgapitls gldwyatdtv yspfgevmrt asgsaprrvw atnlydrntr rltdsitdre
     1561 tpnppnpqnp nristlsyay dpvgnitsit dsqpggridk ecftydpmgq ltqawtgktc
     1621 ggadvksdvt agpdgdgywq eysfdaignr tklvdhdlvd palndeftye ygvtvagngt
     1681 qppvktqpha ltkvnqttrk pgstvtsqst ygydsagntt rrtiggdtqt lnwdrrnklt
     1741 satspgigav aikgladkcm dlqsgatadg tpiqlytcna tkaqawrltg dtlrfqdkca
     1801 tnqggafrla acdgspaqkf tyrpadktlh hpatdqcvdv pagdstdgtd lniwtcngap
     1861 sqqwtfsntt tylydasgnr liedngstrt lylgesvvtv nsagqaldaq ryyagpggvt
     1921 tvrqtfgktt ghkltltlad hhgtattsvd qsdgqpitrr kfdpygnprg tqpanwpgnr
     1981 tflgtgvada stslthigar eyesqtgrfi svdpvidmtd plqmngytya nanpvgnvdp
     2041 dglrviegdd kgwldsggng gndtyenkqk angtwpygaa atstgdvass ggsgkssskk
     2101 kksgcgllsw cnvkkklqah hqivgfvvel tagaacmata vgagmatggv gfavaagcga
     2161 vaaaagaavs nalnpaadhs tmgvlkdmga aaswgaagga lghvaaplva agaskiasrl
     2221 vggsagkaaa gkatgeaaea agrscgcrcn sftagtlvlm adgsakaiek lsandeilat
     2281 dpethqteak tvtasifted dknyvdltie gpaetekitt tahhpfwset qsawvdagdl
     2341 tvgtklrtad ggtatvnrir tyradletfn ltvadfhtyy vlagetpvlv hncgdiekaa
     2401 ksaadsapad atmsaaarfr gtkliatghs ghssrpafye peiesaladg gqiagrgadn
     2461 caeiracnal iaihgadfea ivkrplqltd iefltvrsst gapeaaclsc qsvlvrhgat
     2521 dlsr
//
LOCUS       WP_258024969             236 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Streptomyces bambusae].
ACCESSION   WP_258024969
VERSION     WP_258024969.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces bambusae
  ORGANISM  Streptomyces bambusae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 236)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Streptomyces bambusae"
                     /db_xref="taxon:1550616"
     Protein         1..236
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=25754
     Region          18..232
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 madtfepgcr tgggsagepi rvlvvddhal frrgleivla qeediqvvge agdgaeavdk
       61 aadllpdivl mdvrmprrgg ieactsikev apsakiimlt isdeeadlyd aikagatgyl
      121 lkeistdeva tairavadgq sqispsmask lltefksmiq rtderrlvpa prltdrelev
      181 lklvatgmnn rdiakelfis entvknhvrn ileklqlhsr meavvyamre kileir
//
LOCUS       WP_258025021             118 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6879 family protein [Streptomyces bambusae].
ACCESSION   WP_258025021
VERSION     WP_258025021.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces bambusae
  ORGANISM  Streptomyces bambusae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF045158.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21806.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Streptomyces bambusae"
                     /db_xref="taxon:1550616"
     Protein         1..118
                     /product="DUF6879 family protein"
                     /calculated_mol_wt=13381
ORIGIN      
        1 msgplrklsg npevsrvhvl rsplteylry elaaypgnvk agetigiidl aeqsvtglpd
       61 hdfwlmddrd vyrmhytteg kftgaeilpp drlteyqgyr draltaatpf atywerhh
//
LOCUS       WP_258025218             471 aa            linear   BCT 02-MAR-2025
DEFINITION  amino acid permease [Streptomyces bambusae].
ACCESSION   WP_258025218
VERSION     WP_258025218.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces bambusae
  ORGANISM  Streptomyces bambusae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Streptomyces bambusae"
                     /db_xref="taxon:1550616"
     Protein         1..471
                     /product="amino acid permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=48523
     Region          34..458
                     /region_name="2A0302"
                     /note="transporter, basic amino acid/polyamine antiporter
                     (APA) family; TIGR00905"
                     /db_xref="CDD:129983"
ORIGIN      
        1 mtlhaapptp apeqdrgqqd pghpeggarq egpharrfgl piatclvmgn iigggifllp
       61 asvapfgtis lvafgvltag aialalvfgr laerhpqtgg pyvyaraafg dfagflaaws
      121 ywitawvsna alavaavgyl gvlfpavaeh rwsmclaala vqwlpaaanl agtryvgavq
      181 vvatvlkfap lllvavgglf ffdpanlgpy ragdssamga vsaaaaillf sylgvesaav
      241 sagevrdpar nvgratvlgt vgaavvyllg tlsvfglvah eklvdstapf tdavnamfgg
      301 twggtvvaca avvsmlgaln gwtllsaqtp yaaardglfp rpfavkrrgv pvvgvvvtva
      361 lasaltvyny tfgtggvfev lvlvttftat vpyllataaq iyflasgrad rvhrgrlvrd
      421 avlaclafgf slwlvagsgy aavyqgvlfl fagvlvyavm aaraqrrres a
//
LOCUS       WP_258025389             531 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Streptomyces bambusae].
ACCESSION   WP_258025389
VERSION     WP_258025389.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces bambusae
  ORGANISM  Streptomyces bambusae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Streptomyces bambusae"
                     /db_xref="taxon:1550616"
     Protein         <1..531
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          57..444
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(58..59,62,93,143..144,146..148,151,171,174..175,178,
                     306,309..310,313..315,318,346,350,402..403,407,411,427,
                     430..431,434..435,438)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 aqagagrtas atqatvgttt paaqvgappg aaakaaarpr gavvaalmla malaalegti
       61 vatavpqvvg dlggfsvfsw lfsgyllavt vtlpvygkls dtfgrkpvll fgtglflags
      121 llcslawnma aliafrvvqg lgggalqgtv qtlaadlypl gdrpkiqarm stvwaasalg
      181 gpalggllaa yahwrwifll nlpvgalalw llhrhlhepa rspaaargrt dwagalavfa
      241 cggvllfavv qggvawpwls apslsllavs aalallvvri erraeepvlp gwvwrrrtia
      301 avnlamaalg lvmvapmvfv pmyaqsvlgl dpvgagfvms gmaltwpita afsqhvyrri
      361 gfrgsavvgi giacavlfsf tllphparpw qpalvmlllg aglglfqlpl ivgvqstvgw
      421 aergtttasv lfcrqvgqsl gaalfgaian ltitarladt pgaglptrld dvskaleqpg
      481 sipaaaadql raamatavdh ifvcaaaaal aallvlllva prrfpvlpdn l
//
LOCUS       WP_258025444             304 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein, partial [Streptomyces bambusae].
ACCESSION   WP_258025444
VERSION     WP_258025444.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces bambusae
  ORGANISM  Streptomyces bambusae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   Scherr,N., Honnappa,S., Kunz,G., Mueller,P., Jayachandran,R.,
            Winkler,F., Pieters,J. and Steinmetz,M.O.
  TITLE     Structural basis for the specific inhibition of protein kinase G, a
            virulence factor of Mycobacterium tuberculosis
  JOURNAL   Proc Natl Acad Sci U S A 104 (29), 12151-12156 (2007)
   PUBMED   17616581
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2007 Oct 9;104(41):16388]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028228.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16918.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Streptomyces bambusae"
                     /db_xref="taxon:1550616"
     Protein         <1..304
                     /product="tetratricopeptide repeat protein"
     Region          1..302
                     /region_name="PknG_TPR"
                     /note="Protein kinase G tetratricopeptide repeat;
                     pfam16918"
                     /db_xref="CDD:435652"
     Site            order(90..91,93,117,120..121,124..125,127..128,151,
                     154..155,158..159,162)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          115..145
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          150..174
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 lepggtalal pvplvdpadp nagflaglls sapgdllgal aaapadsael rlrelrarle
       61 lgepdvalra laelevrhad dwrvvwargv aalatgddat aalsfdavyd afpgepapkl
      121 alalcaevlg qldnaaeyyh lvwstdpgfv saafglarvq latgdrdgav rtlesvpeas
      181 ihhtaarvaa vrarlrdrsp qeallpdlva aagqvaeler fgldavrher lraevlgtal
      241 dwvlsgsrga dpgrtsllgs qlderglrfg lersyrvlar laqrgeerie lveranrfrp
      301 rtwv
//
LOCUS       WP_258025516             373 aa            linear   BCT 02-MAR-2025
DEFINITION  polysaccharide biosynthesis/export family protein [Burkholderia sp.
            COPS].
ACCESSION   WP_258025516
VERSION     WP_258025516.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. COPS
  ORGANISM  Burkholderia sp. COPS
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (residues 1 to 373)
  AUTHORS   Stevenson,G., Andrianopoulos,K., Hobbs,M. and Reeves,P.R.
  TITLE     Organization of the Escherichia coli K-12 gene cluster responsible
            for production of the extracellular polysaccharide colanic acid
  JOURNAL   J Bacteriol 178 (16), 4885-4893 (1996)
   PUBMED   8759852
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014606.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02563.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Burkholderia sp. COPS"
                     /db_xref="taxon:2597663"
     Protein         1..373
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0015774 - polysaccharide transport
                     [Evidence IEA]"
                     /calculated_mol_wt=39759
     Region          6..363
                     /region_name="PRK15078"
                     /note="polysaccharide export protein Wza; Provisional"
                     /db_xref="CDD:237903"
ORIGIN      
        1 mrvgslvmil plcallgacg iapgmrmqqp asiplqggst paesaalpvp vtnidlslir
       61 rmrdterstr geardivaap daytigrgdv lqitvwdhpe laaalgapaq aapraadapp
      121 gfvvdqdgtl qfpfagrlpv agltaeqvqt qltrrldrtf rnpqvtvria sfrakqvyie
      181 gevhapgsqp vndipmtlyd aigraggfaa sadqsrivlv rdgverridl temaeqgrnp
      241 skivlrngdl vrvlprdesg vfvmgevnkp vtalpmrngr ltlseaisqa gslnantada
      301 aqlyvvrgmq deqpqvyhld arspvamvla nqfqlkpkdv vyvdgnglvr fsrvlslllp
      361 ainagltaai atk
//
LOCUS       WP_258025605             304 aa            linear   BCT 02-MAR-2025
DEFINITION  M15 family metallopeptidase [Burkholderia sp. COPS].
ACCESSION   WP_258025605
VERSION     WP_258025605.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. COPS
  ORGANISM  Burkholderia sp. COPS
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   Bussiere,D.E., Pratt,S.D., Katz,L., Severin,J.M., Holzman,T. and
            Park,C.H.
  TITLE     The structure of VanX reveals a novel amino-dipeptidase involved in
            mediating transposon-based vancomycin resistance
  JOURNAL   Mol Cell 2 (1), 75-84 (1998)
   PUBMED   9702193
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013586.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01427.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Burkholderia sp. COPS"
                     /db_xref="taxon:2597663"
     Protein         1..304
                     /product="M15 family metallopeptidase"
                     /GO_function="GO:0008237 - metallopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0016805 - dipeptidase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=33442
     Region          128..281
                     /region_name="Peptidase_M15"
                     /note="Metalloproteases including zinc D-Ala-D-Ala
                     carboxypeptidase, L-Ala-D-Glu peptidase,
                     L,D-carboxypeptidase, bacteriophage endolysins, and
                     related proteins; cl38918"
                     /db_xref="CDD:453889"
ORIGIN      
        1 mrlldgsacr ssratkksal trtsrrsger rlpavqtaah plpdsgilan rltkttsagq
       61 prrrlmarnr hraipsaivi slsdpvvrsi alleshegfv dlagfhdria vdpgrddaah
      121 ssrhflkvrh gvaqrlivaa halpdglrly vkegyrplal qrryftrhla hlrrtlnplp
      181 dedtlvalts hyvappevaa hptgaavdlt listdgveld mgcvldatdq essgacythn
      241 pfisraaarh rqvliaaltg agftnypsew whwsfgdryw avmhnqshai ygpveesmld
      301 eaar
//
LOCUS       WP_258025619             358 aa            linear   BCT 02-MAR-2025
DEFINITION  2Fe-2S iron-sulfur cluster-binding protein, partial [Burkholderia
            sp. COPS].
ACCESSION   WP_258025619
VERSION     WP_258025619.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. COPS
  ORGANISM  Burkholderia sp. COPS
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012339.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00111.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Burkholderia sp. COPS"
                     /db_xref="taxon:2597663"
     Protein         <1..358
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /GO_function="GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
     Region          21..257
                     /region_name="flavohem_like_fad_nad_binding"
                     /note="FAD_NAD(P)H binding domain of flavohemoglobin.
                     Flavohemoglobins have a globin domain containing a B-type
                     heme fused with a ferredoxin reductase-like
                     FAD/NAD-binding domain. Flavohemoglobins detoxify nitric
                     oxide (NO) via an NO dioxygenase reaction. The...;
                     cd06184"
                     /db_xref="CDD:99781"
     Site            order(57,73..76,89,91,94..97,139,253)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99781"
     Site            order(73,75..76)
                     /site_type="other"
                     /note="FAD binding motif [chemical binding]"
                     /db_xref="CDD:99781"
     Site            order(94,97,100,107,115,117)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99781"
     Site            order(131,135..138,140)
                     /site_type="other"
                     /note="beta-alpha-beta structure motif"
                     /db_xref="CDD:99781"
     Site            order(136..137,163..165,226..227)
                     /site_type="other"
                     /note="NAD binding pocket [chemical binding]"
                     /db_xref="CDD:99781"
     Site            256
                     /site_type="other"
                     /note="Heme binding pocket [chemical binding]"
                     /db_xref="CDD:99781"
     Region          275..357
                     /region_name="Fdx"
                     /note="Ferredoxin [Energy production and conversion];
                     COG0633"
                     /db_xref="CDD:440398"
ORIGIN      
        1 sasasasast sasapasapa wrplriakiv dearairsfh fepvdggalp ayeagqhltl
       61 rvalpgsdap sirsytlsda pggthyritv kregrvsawl hdraqagmtl daqmprghft
      121 fdlasprpav lvsagigvtp miamlrrala ddrpsrrvvf vhgardaadr pfaaelaria
      181 aadarlsvhw fdshphdgsa aqagridiaq lkrlltfddy dfylcgpsaf mrdlydglra
      241 lnvpderirf eafgpssvar satrttgaqv asvpvvfrrt grdaawtpag gtllefaegq
      301 rvavpsecrs gscgtcatrv lsgavdyeqa pdapvepgca llcvarpaqg seplvldc
//
LOCUS       WP_258025671            4245 aa            linear   BCT 02-MAR-2025
DEFINITION  filamentous haemagglutinin family protein [Burkholderia sp. COPS].
ACCESSION   WP_258025671
VERSION     WP_258025671.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. COPS
  ORGANISM  Burkholderia sp. COPS
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023959.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12545.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4245
                     /organism="Burkholderia sp. COPS"
                     /db_xref="taxon:2597663"
     Protein         1..4245
                     /product="filamentous haemagglutinin family protein"
                     /calculated_mol_wt=421887
     Region          90..1693
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          1143..2788
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          2136..3750
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          4035..4143
                     /region_name="DUF3739"
                     /note="Filamentous haemagglutinin family outer membrane
                     protein; pfam12545"
                     /db_xref="CDD:432625"
ORIGIN      
        1 mllagasahv haagimnlga aaarasggga ggaggapgmp nlgvsaqqal qasqpsirnl
       61 gyaahaiaaq iaaqqnaaaa aaklpstvpn gltpgglqva agassdtnnp vlwfnanapt
      121 qnvdssghvn vdvkqtgqna vltwetmnvg rqttlnfdqs ggtqtngann wavlnrindp
      181 sgrpsqilgn itaqgavyvi nrngvlfgag sqvnvhslva sslnlldmkn qlvptpagiv
      241 asnqqflslp agttgglayp qsgsssgtag dggkpnevlg lgsqallsga yqppgdvtie
      301 qgasitthtn gtasdggfvl vaapnvtnag siaatsgqvv laagvgvslr pngagtlgnp
      361 qvllpelsgq ivtvdpatga sidvtpagtl tntgivqaar gnvnllgsrv aqngvvgvtt
      421 svntpgtiti stadeyasnn plgnpytgst pvtggpgggd nvnragllsf gpgsvttvlp
      481 dnngqtatst pgttftpggi amtagsvwfq ggslieapgs nvsvtayaps vvtnqvsgqt
      541 avpgriyvdd gatidvsgla dvqapisqtl vtvdrigqne ladspllrns flfglkgvvv
      601 dstltgtrsd gvqwvgspil nlsgyvnlip rtvdqlltng gtitlsgnev mtaagssmnl
      661 nggyvhysgg ivnttrlvda ngaivpigqa spydnyvgia gqfvenhprw gvtkswynpl
      721 ltsgtyqsdy ivggnagtld lfasqalvld gdisaqafgg akqmqgnslp sggtfnlgad
      781 pklagnalag mtwnvvantt ltingtsgsv vlqdnapqlg allpgfsidt pldktalqsl
      841 aandpnnllt tqvvpvakln nggfanlnvt edknagkgiv vaqgaqlnlq pggsislnsp
      901 avgadvtvag rlsapsgsis itsggnvvvg pqgalsaagq wvnndvqaap gttpgnsqfi
      961 nggsislsar enatfvngta vdatgsillq pgsvldvsgg gemlangqll mqngvpagrg
     1021 gnvalqtyav paggaqfght ndgganlpdi qptagtiamg gtilsdgfsg ggtmtlgalg
     1081 friggdkaaa apwdvylpen ffaqqgfgky vlnayydsti apgatvaltq rnllpdalal
     1141 qqtgsgasls agglttvgql dayhrqptgl vltggnvvsw ltaanngavp sypgvtgavt
     1201 lssgasihad agagivlasp kqvtvlgsvv apggsivlsa dtgttapqpg qfnvftpsns
     1261 rsawlgsdat ldvsgvalan plaapvkigg ttvvpntgkv lpggsvtlss dagyvvtqag
     1321 skidvsgtsa nfdrlqangt yasqpvwsda gsitlapayg lfadgtmagh agasqarggt
     1381 ltilpranss apgatalvvq qsgmllpagl apgkdfptpi dpttglptgl ptgviqfavd
     1441 rlndsgianl vlgdgtpspf aappiafagn vnltlpesvt lntgriaaig mdqlstllst
     1501 pakpaggnsa ladllaqppa vplgttvtis apyvafagpm apsgtpaftp vatrsdatln
     1561 vnasfvdlrn qfqlnnigqa nftssgdirl sasnpsgkgl spgvlytpgn vtfnaaslyp
     1621 atgstfivda vgpvdsttgk papttvtfgt tgvsgtplsa ggtllvdatn ivqggtvrap
     1681 sgtivfgvgd ptnsatqsqf gnlllvatds vtfangsvts vsnggsiipy gttvdgvewq
     1741 fnpiagttas dltappakyi gvngtsvaln kgatidlsgg gdlqaaewvp gtggtrdvls
     1801 qynvsyasgk gatavpvnag ggnvyaivpg tqspvaaydp lfaqtvqpdv asngtpttkt
     1861 vtlgvgqagl ndaigkavyl sgvpglapgy ytllpgkyat lpgayrvtvs attgnvvpga
     1921 sqvlpdgtvm tagyfadavt ggrsatptlf nvqsgatwqq ysqytlkgan dfftalaakq
     1981 gnvtpplpvd ggqlvlaatk altlgatvna aagpggapae vdiasqdiqi tgngnaalpg
     2041 ylqiggdald slnagsllig gtraattkgv titpiansvv vsndgnsslk gpeillvtkt
     2101 dasgadpsaa nglrvdagas itaagdypaa kdqpitiagd gallrvsnga mapltrtggt
     2161 gtglltvgag atlsggqalm ldssgnlkvd psavlsakai tvdgsaitft nasgaaaaal
     2221 pgfvidpagl aqlanadlvs lrsygamgfv gdvsatfgkr vdlsagtfts dggrvtlngq
     2281 qiaftnetga angtvtpgsg vltvnakeid fgagtktlsg fssanltatg givgqgtgtf
     2341 dfgalpvtln apvyladtss astvkttgal tlsgaagtal tntpvggawk fvggtladng
     2401 atiaapagnv sleattgnlt igggstvssa gvskqffdvt qyapagsiil sadagtvdvq
     2461 pgatldfsga kgggaagslt lsapkqvvnl ngtikggatn gyaggslsld tagaadldal
     2521 aktlassgvn qsidihtrsg nltlsagnal taravsltad ggagnasdaa ngnvnvlgti
     2581 dasgkaggqi slygksgvdi egsllakatd asqrggkvai gtsatfdpav adpynatygy
     2641 envsaaqsgl irlgsnasid vsggtpggtl dgtvnfrapl lrdgtvnial dgggvhgsrk
     2701 ttveayavws aadattgsqh fdglidpagw ydgsghllag tftvpgstpa tysytpggag
     2761 ggtlvnnatg estavtedql rngisgsgft gltgayfvag aanadhvafy gyradgsgts
     2821 pgtlmafvqh gpdgvagqfa gaslqnfsvv pgieldnpgn avnggnisvl snwnlgagap
     2881 nnsgsitpdf ryrstiaptl tfraandfda yasisdgfyq sqvasilggv gpvtatgtyt
     2941 dakqkfdqlv siddptqvtv sfndgatanl taldpnatla splmgqtagy ysaylsytga
     3001 wqqdieawts pdtasnyigh ilpvrpsttp apvladfaty sdyltaywgp dltgakssts
     3061 ylygyarasv irfgtpaapt ppvglqpnsg nsaqaaylad ysnymlaysd yfnsrwpslf
     3121 aprnsynmfy apiapasvpd tgivnigalp gnavanvptp nnpmpvafat llgggsssyr
     3181 ivsgadvqsa nplalqpvst ltnagatsag tgnvmlsght gyvdsngltl vepvtirtgt
     3241 gsidvaagng vslfdtnkta dsstlivpgv iytagapaag apsvgtavai ahapsgglqd
     3301 vlvtpavnpd sagditihaq gdidgmqsvi dtkgavtgst gndigqywwq wmqitagktt
     3361 dgqvvvaplt rtsidfgafd qgvmsvggnv sisaggnisd lavslpttwy lngsgkpvtv
     3421 gggnltvrag gdilsgdyfv akgagtisag grigsdisva prvlgagpid vstvlatqdg
     3481 ifdvtarqgv gigavlnpsy sssffqsggq ptgvinlssy gqypdnqvys ptsavnvlst
     3541 tgdvqlgalg galtgangvl paslgmtafd gaidiqsggv lypsavgqln liagqsvyls
     3601 nvsatridaa lpktfglsda dpsqmpsptn psltpnipal tnttlaahal nplhgadlqp
     3661 vrvyslngsi vnggintsvt gdgfyqnlvt fsvdkpallq agqdivnlaf wgqnlrssdv
     3721 trvvagrdiy dtpistttga vpvlslggpg wfdvqagrni gpltsqaely nrkvnvgglv
     3781 hlftgidavg nannpnlphe sasinvlfgv gpgidlpgfv styvapgssv agvpsatpal
     3841 iafmeqydag igvdtglqad kdaalakvgr ltadeawkqf qalpsyvqql faekvlfgvl
     3901 aqvgadfndp asrysgqyar gyqaintlfp asfgytannl gggsngankq vatgdldirs
     3961 ttiqtqqggd vtilgpggqa lvgsttappq ivdstgnvva gpgtmgiltl ekgnvdiftd
     4021 qsvllaqsri fteqggdmti wssngdinag kgaktsadtp apqyvcdanh yctvdsrgqv
     4081 tgagiatlqs ipgapkgtvn liaprgtvda gdagiragnl nvaalrvvna dniqvtgkat
     4141 giplvqavnt galtaassaa saasqvaqdi aknnasgvap rrwtisvqve gfgdngadgg
     4201 skrrrseqvg ydssnsvsll gfgaaagatq kallskeela klnrl
//
LOCUS       WP_258025680             233 aa            linear   BCT 02-MAR-2025
DEFINITION  haloacid dehalogenase-like hydrolase [Burkholderia sp. COPS].
ACCESSION   WP_258025680
VERSION     WP_258025680.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. COPS
  ORGANISM  Burkholderia sp. COPS
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024122.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12710.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Burkholderia sp. COPS"
                     /db_xref="taxon:2597663"
     Protein         1..233
                     /product="haloacid dehalogenase-like hydrolase"
                     /calculated_mol_wt=25464
     Region          1..>160
                     /region_name="PRK08238"
                     /note="UbiA family prenyltransferase"
                     /db_xref="CDD:236195"
ORIGIN      
        1 mretqkpplv vdldgtltps dtlmesviha vrrkpsnllr lpfwlvrgra afkaevaeha
       61 dfraetlpyr eplvdylese resgrkivlt taahrsiaeq vsaylglfdf viatggetnl
      121 kgatklagir rqvgddfdya gdskadlpiw agangavlvg vtnsqqdlts wpkafdpiqr
      181 sppglahscs sgrstrqisp kcitshssde kspsdtgmmr tlrvigrrtl irh
//
LOCUS       WP_258025716             189 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Burkholderia sp. COPS].
ACCESSION   WP_258025716
VERSION     WP_258025716.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. COPS
  ORGANISM  Burkholderia sp. COPS
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (residues 1 to 189)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Burkholderia sp. COPS"
                     /db_xref="taxon:2597663"
     Protein         <1..189
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <70..176
                     /region_name="PRK15092"
                     /note="DNA-binding transcriptional repressor LrhA;
                     Provisional"
                     /db_xref="CDD:237907"
ORIGIN      
        1 nqldlalvwg dpvsaallsr pgidsdviaq vpmqwvgaag aggfgvpgea degaqvgaaa
       61 vhasaggraa gealplvvfd rpcrffgaat daldragvpw rvafttpsla glwaaaaagl
      121 gltvrshygl pasvrvldaa slglpalpsl plillrrtss atptvdrlaw ivtqavrdat
      181 egavaalaa
//
LOCUS       WP_258025732             305 aa            linear   BCT 02-MAR-2025
DEFINITION  Imm72 family immunity protein [Burkholderia sp. COPS].
ACCESSION   WP_258025732
VERSION     WP_258025732.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. COPS
  ORGANISM  Burkholderia sp. COPS
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (residues 1 to 305)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026922.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15584.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Burkholderia sp. COPS"
                     /db_xref="taxon:2597663"
     Protein         1..305
                     /product="Imm72 family immunity protein"
                     /calculated_mol_wt=35127
     Region          199..293
                     /region_name="Imm72"
                     /note="Immunity protein 72; pfam15584"
                     /db_xref="CDD:292218"
ORIGIN      
        1 mtgrqpapfa ieqddmtdda trrkifwllq rltslslwtr kreaferfan ayehavntwp
       61 dgdpeaiqrt hfpiitdila aydrgltela rgnrigwrsg gpfkdvyrqy hlldayfypn
      121 pdywdrggqv apyppkidal arllhaseyq mesapfdsdd rfgnlarlrs arqllspnay
      181 ernfhtlsyp vfpedlpevp qavgpiiwtg rkvpcdgiwe pvvvkwsrrp glvpivmpgl
      241 rnggcfnyfv rgtrapnitd dfpglfiptc wrllwedrry vngvipdesq yfleprqapq
      301 tnpnp
//
LOCUS       WP_258025846             129 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3619 family protein, partial [Burkholderia sp. COPS].
ACCESSION   WP_258025846
VERSION     WP_258025846.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. COPS
  ORGANISM  Burkholderia sp. COPS
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023699.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12279.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Burkholderia sp. COPS"
                     /db_xref="taxon:2597663"
     Protein         1..>129
                     /product="DUF3619 family protein"
ORIGIN      
        1 mssapanreh efalkvrrxa dlpaattdrl aaarraalar kkpeaatvpv fvpafagaag
       61 aygtapasrp qagrpyasfa rrllrawpla plppgprrhr lpgrpasppp hppdldpalp
      121 ppapppnpv
//
LOCUS       WP_258025847             145 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing
            protein, partial [Burkholderia sp. COPS].
ACCESSION   WP_258025847
VERSION     WP_258025847.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. COPS
  ORGANISM  Burkholderia sp. COPS
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (residues 1 to 145)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02737.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Burkholderia sp. COPS"
                     /db_xref="taxon:2597663"
     Protein         1..>145
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /GO_function="GO:0070403 - NAD+ binding [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
     Region          1..>145
                     /region_name="PRK07066"
                     /note="L-carnitine dehydrogenase"
                     /db_xref="CDD:168796"
ORIGIN      
        1 mavktdiktf aaigtgvigs gwisralahg ldvvvwdpap gaeerlranv anawpalerv
       61 glapgadpar lrfvetieac vadadfiqes aperealkle lheqisraak pdaiiassts
      121 gllptdfyar athpercvvg hpfnp
//
LOCUS       WP_258025860             403 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Burkholderia sp. COPS].
ACCESSION   WP_258025860
VERSION     WP_258025860.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. COPS
  ORGANISM  Burkholderia sp. COPS
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Burkholderia sp. COPS"
                     /db_xref="taxon:2597663"
     Protein         <1..>403
                     /product="DUF6531 domain-containing protein"
     Region          12..86
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
     Region          <178..>401
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
ORIGIN      
        1 klckngapsg sggsisfatg aetrshtdfa lpgpfplawt rtyrsslday dhdelgarwi
       61 tpcttridvq gdglryhgad grshdyplpk vgqfhedrie dllvvrasdh qlvlcrgyer
      121 retyqrhger fllvqvelrg gaglllgydh rvdervvlsd lvtyqddpsr phthlgtdvd
      181 ahgriiglwl mgedeplrrl clyrydeagd ltlaqdenae vwtyqyqhhl itrytdrtgr
      241 gmnlewqgeg pdaravhewa ddgsfevrle wdsnirltyv tdahgqetrh yydrlgytyr
      301 iihpdkrsew flrddakniv hhirpdgsdd ryaydengnl lehiradgtt vhyawdtkdq
      361 likisdaegg lwlrdydtrg rltesidplg nkteyaynpm glp
//
LOCUS       WP_258025891             624 aa            linear   BCT 02-MAR-2025
DEFINITION  G5 domain-containing protein [Streptococcus parauberis].
ACCESSION   WP_258025891
VERSION     WP_258025891.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus parauberis
  ORGANISM  Streptococcus parauberis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 624)
  AUTHORS   Ruggiero,A., Tizzano,B., Pedone,E., Pedone,C., Wilmanns,M. and
            Berisio,R.
  TITLE     Crystal structure of the resuscitation-promoting factor
            (DeltaDUF)RpfB from M. tuberculosis
  JOURNAL   J Mol Biol 385 (1), 153-162 (2009)
   PUBMED   18992255
REFERENCE   2  (residues 1 to 624)
  AUTHORS   Bateman,A., Holden,M.T. and Yeats,C.
  TITLE     The G5 domain: a potential N-acetylglucosamine recognition domain
            involved in biofilm formation
  JOURNAL   Bioinformatics 21 (8), 1301-1303 (2005)
   PUBMED   15598841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019142.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07501.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Streptococcus parauberis"
                     /db_xref="taxon:1348"
     Protein         1..624
                     /product="G5 domain-containing protein"
                     /calculated_mol_wt=69281
     Region          307..418
                     /region_name="M34_peptidase"
                     /note="Peptidase family M34 includes the C-terminal
                     catalytic domain of anthrax lethal factor (ATLF), the
                     protective antigen-binding domains of ATLF and edema
                     factor, and Pro-Pro endopeptidase; cl40422"
                     /db_xref="CDD:394792"
     Region          465..>498
                     /region_name="G5"
                     /note="G5 domain; pfam07501"
                     /db_xref="CDD:462185"
ORIGIN      
        1 mpttttevia paiteysidv tkpvgtdvii pgqdgtkttt ttniiqtett apasqavydd
       61 sykwidqpfy hvdttqtlps drivvdtlfv drppltadys ttestvrela qysenyiyey
      121 ltvtnpdgtt tqtryirtit aemldptdtq lrsllgltdd aafysrlltt aqedmwtasa
      181 qdygiemvpe dlststddfl rydnsniind afyadikady qrailaeqel ealgswttqq
      241 qtdmnmitdq fnsltrrynn ykgsistsid ysnttmmsdt qkadfearih alpeelqrii
      301 adlviydnei pgmgtgtlgl ansaaqsial kyeasntslm etvlhemthi idfksglyve
      361 tsdrntdgtl dtvpalsdtq efldiyhtyf drsdvwpyyr dnsseafaeg lsqyimhrlf
      421 gspyatyvpn pytgdaydpg ngtgyspfaa tefyfaslfn klvgvdkvta iayqteyrdn
      481 ptllkgtqvv vtpgedgqts qpvqsydfiq dganshftnv qygnpviida qnrmieegty
      541 vapetpdenp aepskpeakp qpvvvkdtkk eiltvatpke ktpvkeaqlp ttgdkassfs
      601 aivsssillv tglallkklk kdrn
//
LOCUS       WP_258025514             296 aa            linear   BCT 02-MAR-2025
DEFINITION  AidA/PixA family protein [Burkholderia sp. COPS].
ACCESSION   WP_258025514
VERSION     WP_258025514.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia sp. COPS
  ORGANISM  Burkholderia sp. COPS
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia.
REFERENCE   1  (residues 1 to 296)
  AUTHORS   Goetsch,M., Owen,H., Goldman,B. and Forst,S.
  TITLE     Analysis of the PixA inclusion body protein of Xenorhabdus
            nematophila
  JOURNAL   J Bacteriol 188 (7), 2706-2710 (2006)
   PUBMED   16547059
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023725.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12306.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Burkholderia sp. COPS"
                     /db_xref="taxon:2597663"
     Protein         1..296
                     /product="AidA/PixA family protein"
                     /calculated_mol_wt=31640
     Region          7..163
                     /region_name="PixA"
                     /note="Inclusion body protein; pfam12306"
                     /db_xref="CDD:432466"
     Region          187..294
                     /region_name="PA-IIL"
                     /note="Fucose-binding lectin II (PA-IIL); pfam07472"
                     /db_xref="CDD:429479"
ORIGIN      
        1 mpglrsdvlv ivdavtllsa ypeasrdpda ptvidgrhly vvspgdaaql ghndsrlfag
       61 lspgdqlrlr etalalraea svlfvrfalk dagivapfea eirdaaapvp daddllhppc
      121 hpmkdhywrs dvlaagattc tadfavfdrd gtvsgyfrwe tsieigagqp aekqqdfkps
      181 sdrngnftlp pntafkaify anaadrqdlr lfiddapepa asftgnsddg vrlftlnsks
      241 gkiridasan grksatdarl aplsagdtvw lgwlgaedga dadyndgivi lqwpvt
//
LOCUS       WP_258025936             111 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1492 domain-containing protein [Streptococcus parauberis].
ACCESSION   WP_258025936
VERSION     WP_258025936.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus parauberis
  ORGANISM  Streptococcus parauberis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019021.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07374.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Streptococcus parauberis"
                     /db_xref="taxon:1348"
     Protein         1..111
                     /product="DUF1492 domain-containing protein"
                     /calculated_mol_wt=12821
     Region          <25..103
                     /region_name="sigma70-ECF"
                     /note="RNA polymerase sigma factor, sigma-70 family;
                     TIGR02937"
                     /db_xref="CDD:274357"
ORIGIN      
        1 mtvssttfee kissgtrnte apfvrnlekc yqleaeidae idkfvdlkrq mrgvideltn
       61 vdekivlinr ylleeswdki aedlhadvrt vfrwhskale nlklpdepiv i
//
LOCUS       WP_258025943             245 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase domain-containing protein [Staphylococcus
            aureus].
ACCESSION   WP_258025943
VERSION     WP_258025943.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025217.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13847.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..245
                     /product="methyltransferase domain-containing protein"
                     /calculated_mol_wt=27359
     Region          11..223
                     /region_name="PRK08317"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:181382"
ORIGIN      
        1 mfmqnrndfi eklldraqie egmrvldigc atgevtqlia krvgangevv gvdvnesllk
       61 ianennqynn vsyqysdiyq lpetmghfda ivgrrvlmyl pdaekclqtl ksilkpegil
      121 cfqesdaina gigadalslh qsaiqwiwet vkqeggnihi gqnlynlfnk ngmhvvdyfa
      181 eaviqtsmdn dlawlvdvml prmkahgvin ddfsldefks nleheainnq cafirdmafg
      241 iigka
//
LOCUS       WP_258025967             357 aa            linear   BCT 02-MAR-2025
DEFINITION  CHAP domain-containing protein, partial [Streptococcus parauberis].
ACCESSION   WP_258025967
VERSION     WP_258025967.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus parauberis
  ORGANISM  Streptococcus parauberis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 357)
  AUTHORS   Pai,C.H., Wu,H.J., Lin,C.H. and Wang,A.H.
  TITLE     Structure and mechanism of Escherichia coli glutathionylspermidine
            amidase belonging to the family of cysteine; histidine-dependent
            amidohydrolases/peptidases
  JOURNAL   Protein Sci 20 (3), 557-566 (2011)
   PUBMED   21226054
REFERENCE   2  (residues 1 to 357)
  AUTHORS   Nelson,D., Schuch,R., Chahales,P., Zhu,S. and Fischetti,V.A.
  TITLE     PlyC: a multimeric bacteriophage lysin
  JOURNAL   Proc Natl Acad Sci U S A 103 (28), 10765-10770 (2006)
   PUBMED   16818874
REFERENCE   3  (residues 1 to 357)
  AUTHORS   Bateman,A. and Rawlings,N.D.
  TITLE     The CHAP domain: a large family of amidases including GSP amidase
            and peptidoglycan hydrolases
  JOURNAL   Trends Biochem Sci 28 (5), 234-237 (2003)
   PUBMED   12765834
REFERENCE   4  (residues 1 to 357)
  AUTHORS   Rigden,D.J., Jedrzejas,M.J. and Galperin,M.Y.
  TITLE     Amidase domains from bacterial and phage autolysins define a family
            of gamma-D,L-glutamate-specific amidohydrolases
  JOURNAL   Trends Biochem Sci 28 (5), 230-234 (2003)
   PUBMED   12765833
REFERENCE   5  (residues 1 to 357)
  AUTHORS   Bollinger,J.M. Jr., Kwon,D.S., Huisman,G.W., Kolter,R. and
            Walsh,C.T.
  TITLE     Glutathionylspermidine metabolism in Escherichia coli.
            Purification, cloning, overproduction, and characterization of a
            bifunctional glutathionylspermidine synthetase/amidase
  JOURNAL   J Biol Chem 270 (23), 14031-14041 (1995)
   PUBMED   7775463
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017102.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05257.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Streptococcus parauberis"
                     /db_xref="taxon:1348"
     Protein         <1..357
                     /product="CHAP domain-containing protein"
     Region          <56..>135
                     /region_name="LytD"
                     /note="Beta- N-acetylglucosaminidase [Carbohydrate
                     transport and metabolism]; COG4193"
                     /db_xref="CDD:443347"
     Region          <244..355
                     /region_name="PRK08581"
                     /note="amidase domain-containing protein"
                     /db_xref="CDD:236304"
ORIGIN      
        1 tpqeatpspa qlptvdswsd fsvpahlpsa masaayvehw tgqdayshnl lshrygitaa
       61 qldgylkstg iaydtnring akllewekes gldvraiiai amaesslgtq gvakeaganm
      121 fgygafdnnp ghakafndqv avtkmteeti iqnhntsfei qdnkakllsa grlnisvegg
      181 vyftdtsgtg ksrakimeai dqwidqhggt paipkelqmq ssalltavpv sfklskpnhv
      241 igysavtypw gqctwyvynr aqelgyhfgq fmgnggdwkn kagyetthtp kvgyalsfsp
      301 gqagadpsyg hvaiveevkk dgtvlisesn ciglgvisyr tfsaaqasql tyvvgek
//
LOCUS       WP_258026002             357 aa            linear   BCT 02-MAR-2025
DEFINITION  CHAP domain-containing protein, partial [Streptococcus parauberis].
ACCESSION   WP_258026002
VERSION     WP_258026002.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus parauberis
  ORGANISM  Streptococcus parauberis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 357)
  AUTHORS   Pai,C.H., Wu,H.J., Lin,C.H. and Wang,A.H.
  TITLE     Structure and mechanism of Escherichia coli glutathionylspermidine
            amidase belonging to the family of cysteine; histidine-dependent
            amidohydrolases/peptidases
  JOURNAL   Protein Sci 20 (3), 557-566 (2011)
   PUBMED   21226054
REFERENCE   2  (residues 1 to 357)
  AUTHORS   Nelson,D., Schuch,R., Chahales,P., Zhu,S. and Fischetti,V.A.
  TITLE     PlyC: a multimeric bacteriophage lysin
  JOURNAL   Proc Natl Acad Sci U S A 103 (28), 10765-10770 (2006)
   PUBMED   16818874
REFERENCE   3  (residues 1 to 357)
  AUTHORS   Bateman,A. and Rawlings,N.D.
  TITLE     The CHAP domain: a large family of amidases including GSP amidase
            and peptidoglycan hydrolases
  JOURNAL   Trends Biochem Sci 28 (5), 234-237 (2003)
   PUBMED   12765834
REFERENCE   4  (residues 1 to 357)
  AUTHORS   Rigden,D.J., Jedrzejas,M.J. and Galperin,M.Y.
  TITLE     Amidase domains from bacterial and phage autolysins define a family
            of gamma-D,L-glutamate-specific amidohydrolases
  JOURNAL   Trends Biochem Sci 28 (5), 230-234 (2003)
   PUBMED   12765833
REFERENCE   5  (residues 1 to 357)
  AUTHORS   Bollinger,J.M. Jr., Kwon,D.S., Huisman,G.W., Kolter,R. and
            Walsh,C.T.
  TITLE     Glutathionylspermidine metabolism in Escherichia coli.
            Purification, cloning, overproduction, and characterization of a
            bifunctional glutathionylspermidine synthetase/amidase
  JOURNAL   J Biol Chem 270 (23), 14031-14041 (1995)
   PUBMED   7775463
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017102.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05257.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Streptococcus parauberis"
                     /db_xref="taxon:1348"
     Protein         <1..357
                     /product="CHAP domain-containing protein"
     Region          <56..>135
                     /region_name="LytD"
                     /note="Beta- N-acetylglucosaminidase [Carbohydrate
                     transport and metabolism]; COG4193"
                     /db_xref="CDD:443347"
     Region          <244..355
                     /region_name="PRK08581"
                     /note="amidase domain-containing protein"
                     /db_xref="CDD:236304"
ORIGIN      
        1 tpqeatpspa qlptvdswsd fsvpahlpsa masaayvehw tgqdayshnl lshrygitaa
       61 qldgylkstg iaydtnring akllewekes gldvraiiai amaesslgtq gvakeaganm
      121 fgygafdnnp ghakafndqv avtkmteeti iqnhntsfei qdnkakllsa grlnisvegg
      181 vyftdtsgtg ksrakimeai dqwidqhggt paipkelqmq ssalltavpv sfklskpnhv
      241 igysavtypw gqctwyvynr aqelgyhfgq fmgnggdwkn kagyetthtp kvgyalsfsp
      301 gqagadpsyg hvaiveevkk dgtvlisesn ciglgvisyr tfsaaqasql tyvvger
//
LOCUS       WP_258026015             141 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase [Staphylococcus auricularis].
ACCESSION   WP_258026015
VERSION     WP_258026015.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus auricularis
  ORGANISM  Staphylococcus auricularis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Staphylococcus auricularis"
                     /db_xref="taxon:29379"
     Protein         1..141
                     /product="PfkB family carbohydrate kinase"
                     /calculated_mol_wt=15230
     Region          <8..132
                     /region_name="FruK"
                     /note="1-phosphofructokinase or 6-phosphofructokinase II
                     [Carbohydrate transport and metabolism]; COG1105"
                     /db_xref="CDD:440722"
ORIGIN      
        1 mhsqhcppyl ikpnseelam lvndnaskdv reiltashla hipnillsqg aegavlrtke
       61 tcyqytipki kvvnpvgsgd ssvagfcygl aqtqssveat kyamaagvcn amehrtgyid
      121 ltnyqhvlsq inctkvaqqh d
//
LOCUS       WP_258026023             296 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2357 domain-containing protein, partial [Staphylococcus aureus].
ACCESSION   WP_258026023
VERSION     WP_258026023.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 296)
  AUTHORS   Knizewski,L., Kinch,L.N., Grishin,N.V., Rychlewski,L. and
            Ginalski,K.
  TITLE     Realm of PD-(D/E)XK nuclease superfamily revisited: detection of
            novel families with modified transitive meta profile searches
  JOURNAL   BMC Struct Biol 7, 40 (2007)
   PUBMED   17584917
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021352.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09823.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>296
                     /product="DUF2357 domain-containing protein"
     Region          91..>271
                     /region_name="DUF2357"
                     /note="Domain of unknown function (DUF2357); pfam09823"
                     /db_xref="CDD:430854"
ORIGIN      
        1 mdlhsnldii vsngyrenvy nivfresikd infekdvlsf keyhsmkfrh kstdynekly
       61 fncfdtivdd ilkidkkgns ylsnatldii nytsnndqnv lvpgyylltl vnektkyaii
      121 kivpkdftee ewkslyedvn sylnglansf vnrnnvtviq nkkdnnlynk infidkyfik
      181 iinsvnqliv nprltiqkny kwvpkhtqph vdkktikyss kypnktqyly tykrvinyni
      241 senmwlkfvv efllkelnsi gkeiilkien enykynskys seikkakitk nnlnqa
//
LOCUS       WP_258026032             137 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Staphylococcus aureus].
ACCESSION   WP_258026032
VERSION     WP_258026032.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 137)
  AUTHORS   Yeo,C.C. and Poh,C.L.
  TITLE     Characterization of IS1474, an insertion sequence of the IS21
            family isolated from Pseudomonas alcaligenes NCIB 9867
  JOURNAL   FEMS Microbiol Lett 149 (2), 257-263 (1997)
   PUBMED   9141667
REFERENCE   2  (residues 1 to 137)
  AUTHORS   Solinas,F., Marconi,A.M., Ruzzi,M. and Zennaro,E.
  TITLE     Characterization and sequence of a novel insertion sequence,
            IS1162, from Pseudomonas fluorescens
  JOURNAL   Gene 155 (1), 77-82 (1995)
   PUBMED   7698671
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01695.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..137
                     /product="ATP-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=15623
     Region          <9..132
                     /region_name="IS21_help_AAA"
                     /note="IS21-like element helper ATPase IstB; NF038214"
                     /db_xref="CDD:439516"
ORIGIN      
        1 mcfldnrvvg kthltislgi eackqnikts fytfkelidl ltvtdskeii nktlkqlsri
       61 elliideicy saitkeqadl fyqlmslkye mkstiittni tfsswgesfs nkivsaaiid
      121 rlvhhskifk itenhid
//
LOCUS       WP_258026049             161 aa            linear   BCT 02-MAR-2025
DEFINITION  DAK2 domain-containing protein, partial [Staphylococcus aureus].
ACCESSION   WP_258026049
VERSION     WP_258026049.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014754.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02734.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>161
                     /product="DAK2 domain-containing protein"
                     /GO_function="GO:0004371 - glycerone kinase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006071 - glycerol metabolic process
                     [Evidence IEA]"
     Region          5..>161
                     /region_name="YloV"
                     /note="Predicted kinase related to dihydroxyacetone kinase
                     [General function prediction only]; COG1461"
                     /db_xref="CDD:441070"
ORIGIN      
        1 miskingklf admiiqgaqn lsnnadlvds lnvypvpdgd tgtnmnltmt sgreevennl
       61 sknigelgkt fskgllmgar gnsgvilsql frgfcknies eseinsklla esfqagveta
      121 ykavmkpveg tiltvakdaa qaaiekannt edcielmeyi i
//
LOCUS       WP_258026086             307 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Staphylococcus haemolyticus].
ACCESSION   WP_258026086
VERSION     WP_258026086.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus haemolyticus
  ORGANISM  Staphylococcus haemolyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Staphylococcus haemolyticus"
                     /db_xref="taxon:1283"
     Protein         <1..307
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <73..293
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 lialkiiknv gttvktpidi fsiilsilgf ggllygvssi ssdgwddplv litiiggill
       61 vglfiwrqer ldtpllsfkv fknkefavgl aimaatmism igsetvlpmf vqnllgrtpi
      121 dsglillpga ivmaimsvis gwlyetfgak vlaiigmsiv littsyfvvm dehtstvmla
      181 tvyairmigi amglmpimth tmnqltpeln ahgssmtnti qqiagsigta glitilstas
      241 knfqptmsdy qgmdkkemag qiqidamlhg yhsgflfavi itfisllltf likskkkvka
      301 eaklqnd
//
LOCUS       WP_258026089             801 aa            linear   BCT 02-MAR-2025
DEFINITION  E domain-containing protein, partial [Staphylococcus haemolyticus].
ACCESSION   WP_258026089
VERSION     WP_258026089.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus haemolyticus
  ORGANISM  Staphylococcus haemolyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 801)
  AUTHORS   Gruszka,D.T., Wojdyla,J.A., Bingham,R.J., Turkenburg,J.P.,
            Manfield,I.W., Steward,A., Leech,A.P., Geoghegan,J.A., Foster,T.J.,
            Clarke,J. and Potts,J.R.
  TITLE     Staphylococcal biofilm-forming protein has a contiguous rod-like
            structure
  JOURNAL   Proc Natl Acad Sci U S A 109 (17), E1011-E1018 (2012)
   PUBMED   22493247
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028351.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17041.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Staphylococcus haemolyticus"
                     /db_xref="taxon:1283"
     Protein         <1..>801
                     /product="E domain-containing protein"
     Region          <2..210
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          260..494
                     /region_name="Bact_lectin"
                     /note="Bacterial lectin; pfam18483"
                     /db_xref="CDD:465784"
     Region          526..596
                     /region_name="G5"
                     /note="G5 domain; pfam07501"
                     /db_xref="CDD:462185"
     Region          654..725
                     /region_name="G5"
                     /note="G5 domain; pfam07501"
                     /db_xref="CDD:462185"
ORIGIN      
        1 teekadtteq asteekantt eqasteekan tteqasteek adtteqaste ekadtteqas
       61 teekadtteq aateeapkae etektateea pkteetdkve teeapkaeet skaatekapk
      121 aeetnkvete eapaaeetnk aateetpave dtnaksnsna qpsetertqv vdtvakdlyk
      181 ksevteaeka eiekvlpkdi snlsneeikk ialsevlket ankenaqpra tfrsvssnar
      241 ttnvnysata lraaaqdtvt kkgtgnftah gdiihktyke efpnegtlta fntnfnpntg
      301 tkgaleyndk idfnkdftit vpvannnqgn ttgadgwgfm ftqgngqdfl nqggilrdkg
      361 manasgfkid taynnvngkv dkldadktnn lsqigaakvg ygtfvkngad gvtnqvgqna
      421 lntkdkpvnk iiyadnttnh ldgqfhgqrl ndvvlnydaa tstitatyag ktwkattddl
      481 gidksqkynf litsshmqnr ysdgimrtnl egvtittpqa dliddvevtk qpiphktire
      541 fdptlepgsp dvivqkgedg ekttttptkv dpdtgdvver gepttevtkn pvdeivhfap
      601 eevpqghkde fdpnlpidgt eevpgkpgik npetgevvtp pvddvtkhgp kagepevtke
      661 eipyetkrvl dptmepgspd kvaqkgenge kttttpttin pltgekvgeg epttevtkep
      721 ideivnyape iiphgtreei dpnlpegetk vipgkdglkd petgeiieep qdeviihgak
      781 ddsdadsdsd sdsdsdsdsd s
//
LOCUS       WP_258026117              84 aa            linear   BCT 02-MAR-2025
DEFINITION  polymorphic toxin type 50 domain-containing protein, partial
            [Staphylococcus aureus].
ACCESSION   WP_258026117
VERSION     WP_258026117.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 84)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026880.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15542.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..84
                     /product="polymorphic toxin type 50 domain-containing
                     protein"
     Region          <9..78
                     /region_name="Ntox50"
                     /note="Bacterial toxin 50; pfam15542"
                     /db_xref="CDD:406083"
ORIGIN      
        1 lqnderfpsy tilsieelnd llkkysmtgk ilvdkfgfnr keiinfekti gkayacgkyi
       61 naaygkihys ktgshivpfv skek
//
LOCUS       WP_258026126             159 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Staphylococcus aureus].
ACCESSION   WP_258026126
VERSION     WP_258026126.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13751.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..159
                     /product="transposase"
     Region          <1..131
                     /region_name="transpos_IS1182"
                     /note="IS1182 family transposase; NF033551"
                     /db_xref="CDD:468080"
ORIGIN      
        1 eficpnnkri gfkryayrnd rygfkrdfkl yecddcsacs lrqqcmkpns ksnkkimkny
       61 nweyfkaqin qklsepetkk iysqrkidve pvfgfmkail gftrmsvrgi nkvkrelgfv
      121 lmalnirkia aqravhykih ikkadfyqii nrnqlfyia
//
LOCUS       WP_258026150             158 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Staphylococcus
            capitis].
ACCESSION   WP_258026150
VERSION     WP_258026150.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus capitis
  ORGANISM  Staphylococcus capitis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 158)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 158)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 158)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Staphylococcus capitis"
                     /db_xref="taxon:29388"
     Protein         1..>158
                     /product="ABC transporter substrate-binding protein"
     Region          2..>152
                     /region_name="FecB"
                     /note="ABC-type Fe3+-citrate transport system, periplasmic
                     component [Inorganic ion transport and metabolism];
                     COG4594"
                     /db_xref="CDD:443650"
ORIGIN      
        1 mtkeikqnvg tvevpdtves avaleysfve alvkldvnvt giaddnnvdn ldsetrknvg
       61 syqsvghrqt psvddiknae pqvifadedr hksifedlns iaptvlvksf dadykqnkes
      121 fdyiakvvsk qdegktildn hekeikdlss kvridkdv
//
LOCUS       WP_258026170             140 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase, partial [Staphylococcus capitis].
ACCESSION   WP_258026170
VERSION     WP_258026170.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus capitis
  ORGANISM  Staphylococcus capitis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 140)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 140)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Staphylococcus capitis"
                     /db_xref="taxon:29388"
     Protein         <1..140
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
     Region          36..>104
                     /region_name="YidJ"
                     /note="Predicted acetyltransferase, GNAT superfamily
                     [General function prediction only]; COG2388"
                     /db_xref="CDD:441953"
ORIGIN      
        1 tatkeegpig kerlyyldld skhvsslrlv esetsneani hvinllkdnd kvgfiaieqi
       61 edrmrisaie vnkahrnegi aesalrqlat yirknfdgik vlaitlygen nelkplcdns
      121 nfvvieeaed yvlfekyiny
//
LOCUS       WP_258026176             610 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase family protein, partial [Staphylococcus
            aureus].
ACCESSION   WP_258026176
VERSION     WP_258026176.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04851.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>610
                     /product="DEAD/DEAH box helicase family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
     Region          38..175
                     /region_name="PLDc_N_DEXD_b2"
                     /note="N-terminal putative catalytic domain of
                     uncharacterized prokaryotic and archeal HKD family
                     nucleases fused to a DEAD/DEAH box helicase domain;
                     cd09204"
                     /db_xref="CDD:197298"
     Site            order(117..122,135,137,139,147..151,153,155)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:197298"
     Site            order(119,121,137,139,150)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197298"
     Site            119
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197298"
     Region          137..>560
                     /region_name="SSL2"
                     /note="Superfamily II DNA or RNA helicase [Transcription,
                     Replication, recombination, and repair]; COG1061"
                     /db_xref="CDD:440681"
ORIGIN      
        1 msrllndfnq slhkgfidkh ishkgnytpk llvnnknekv lstiidelqk cetfyfsvaf
       61 itesglaslk aqlldlsnkg vkgkiltsny lgfnspkmyg ellklknvev rltdiagfha
      121 kgyifehkdy ssmvigssnl tsnalkvnye hnvllstmkn gdlvdsvkne fdllwqnstq
      181 ltqqwinsyk esfeyrslek laeveqtqml ladkvkksve ivpnlmqaea lrslkairdk
      241 akdkaliisa tgtgktilca ldvrevnpnk flfivhnegi lnrakeefkk vlptkndsdf
      301 glltgkhrdv dakylfatiq tlsrddnfkq fdekefdyiv fdeahrsaas tyqrvfnyfk
      361 pkfmlgmtat persdelsif emfdyniaye irlqaalesd ilcpfhyfgv tdyvhqgike
      421 ddvtklrylt sdervnyiiq ktdyygysge ilqglifvss kkeaydladk lsskgiksva
      481 ltgddsvnyr qivieklreg kinyiitvdl fnegidipev nqvvmlrpte ssiifiqqlg
      541 rglrkssnke yvtvidfign yktnylipia lsgdqsqnkd nykkfltnnd singvstinf
      601 eedakkqiyn
//
LOCUS       WP_258026203              36 aa            linear   BCT 02-MAR-2025
DEFINITION  chorismate synthase, partial [Staphylococcus aureus].
ACCESSION   WP_258026203
VERSION     WP_258026203.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01264.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..36
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>36
                     /product="chorismate synthase"
                     /EC_number="4.2.3.5"
                     /GO_function="GO:0004107 - chorismate synthase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
     Region          1..>36
                     /region_name="Chorismate_synthase"
                     /note="Chorismase synthase, the enzyme catalyzing the
                     final step of the shikimate pathway; cl00323"
                     /db_xref="CDD:469721"
ORIGIN      
        1 mryltsgesh gpqltviveg vpanleikve dinkem
//
LOCUS       WP_258026214             200 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase, partial [Staphylococcus
            aureus].
ACCESSION   WP_258026214
VERSION     WP_258026214.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 200)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..200
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
     Region          <1..192
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 kgrgghgakp hetidpivim aefilsaqki isrtidpvkq avlsfgmiqa gttdsvipdq
       61 afckgtvrtf dskiqehvmh kmdkllqgla iandieydln yikgylpvhn nekayqvike
      121 atndlhvrfn esdlmmiged fshylkvrpg affltgcgne skgitaphhn pkfdideksl
      181 kyavavflki ieleqvfktn
//
LOCUS       WP_258026284             293 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase, partial [Staphylococcus aureus].
ACCESSION   WP_258026284
VERSION     WP_258026284.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024867.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13476.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>293
                     /product="AAA family ATPase"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /GO_process="GO:0006302 - double-strand break repair
                     [Evidence IEA]"
     Region          1..>259
                     /region_name="sbcc"
                     /note="exonuclease SbcC; TIGR00618"
                     /db_xref="CDD:129705"
     Region          1..>161
                     /region_name="ABC_sbcCD"
                     /note="ATP-binding cassette domain of sbcCD; cd03279"
                     /db_xref="CDD:213246"
     Site            34..41
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213246"
     Site            150..153
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213246"
ORIGIN      
        1 mkplhlklnn fgpflkeeid fskidnnelf lisgktgsgk tmifdamtya lfgkasteqr
       61 eendlrshfa dgkqpmsvtf efqlnhriyk vhrqgpyike gnttktnakf dvfemvdgky
      121 eireskvisg tqfiiellgv nadqfrqlfi lpqgefkrfl isnsrekqgi lrtlfdsekf
      181 eaireilkee vkkekaqien ryqqidllwq eiesfdddni kgllevatqq idklienipl
      241 lqarskeila svnesketai kefeiiekkt lennilkdni nqlnknkidf vql
//
LOCUS       WP_258026109              94 aa            linear   BCT 02-MAR-2025
DEFINITION  WXG100 family type VII secretion target [Staphylococcus aureus].
ACCESSION   WP_258026109
VERSION     WP_258026109.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 94)
  AUTHORS   Sutcliffe,I.C.
  TITLE     New insights into the distribution of WXG100 protein secretion
            systems
  JOURNAL   Antonie Van Leeuwenhoek 99 (2), 127-131 (2011)
   PUBMED   20852931
REFERENCE   2  (residues 1 to 94)
  AUTHORS   Desvaux,M., Hebraud,M., Talon,R. and Henderson,I.R.
  TITLE     Outer membrane translocation: numerical protein secretion
            nomenclature in question in mycobacteria
  JOURNAL   Trends Microbiol 17 (8), 338-340 (2009)
   PUBMED   19674902
REFERENCE   3  (residues 1 to 94)
  AUTHORS   Desvaux,M., Hebraud,M., Talon,R. and Henderson,I.R.
  TITLE     Secretion and subcellular localizations of bacterial proteins: a
            semantic awareness issue
  JOURNAL   Trends Microbiol 17 (4), 139-145 (2009)
   PUBMED   19299134
REFERENCE   4  (residues 1 to 94)
  AUTHORS   Burts,M.L., Williams,W.A., DeBord,K. and Missiakas,D.M.
  TITLE     EsxA and EsxB are secreted by an ESAT-6-like system that is
            required for the pathogenesis of Staphylococcus aureus infections
  JOURNAL   Proc Natl Acad Sci U S A 102 (4), 1169-1174 (2005)
   PUBMED   15657139
REFERENCE   5  (residues 1 to 94)
  AUTHORS   Pallen,M.J.
  TITLE     The ESAT-6/WXG100 superfamily -- and a new Gram-positive secretion
            system?
  JOURNAL   Trends Microbiol 10 (5), 209-212 (2002)
   PUBMED   11973144
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017793.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06013.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..94
                     /product="WXG100 family type VII secretion target"
                     /calculated_mol_wt=10479
ORIGIN      
        1 mqksqeearl qqlkqemrns tdnlvsnakn nvalksqtln eiietinnss qnlegtfegk
       61 aseaaqqsin klknnnenlk qkfetllntm king
//
LOCUS       WP_258026278              70 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaJ domain-containing protein, partial [Staphylococcus aureus].
ACCESSION   WP_258026278
VERSION     WP_258026278.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 70)
  AUTHORS   Kelley,W.L.
  TITLE     The J-domain family and the recruitment of chaperone power
  JOURNAL   Trends Biochem Sci 23 (6), 222-227 (1998)
   PUBMED   9644977
REFERENCE   2  (residues 1 to 70)
  AUTHORS   Stubdal,H., Zalvide,J., Campbell,K.S., Schweitzer,C., Roberts,T.M.
            and DeCaprio,J.A.
  TITLE     Inactivation of pRB-related proteins p130 and p107 mediated by the
            J domain of simian virus 40 large T antigen
  JOURNAL   Mol Cell Biol 17 (9), 4979-4990 (1997)
   PUBMED   9271376
REFERENCE   3  (residues 1 to 70)
  AUTHORS   Pellecchia,M., Szyperski,T., Wall,D., Georgopoulos,C. and
            Wuthrich,K.
  TITLE     NMR structure of the J-domain and the Gly/Phe-rich region of the
            Escherichia coli DnaJ chaperone
  JOURNAL   J Mol Biol 260 (2), 236-250 (1996)
   PUBMED   8764403
REFERENCE   4  (residues 1 to 70)
  AUTHORS   Cyr,D.M., Langer,T. and Douglas,M.G.
  TITLE     DnaJ-like proteins: molecular chaperones and specific regulators of
            Hsp70
  JOURNAL   Trends Biochem Sci 19 (4), 176-181 (1994)
   PUBMED   8016869
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012451.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00226.36
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>70
                     /product="DnaJ domain-containing protein"
     Region          1..>70
                     /region_name="PRK14280"
                     /note="molecular chaperone DnaJ"
                     /db_xref="CDD:237656"
ORIGIN      
        1 makrdyyevl giskdaskde ikkayrklsk kyhpdinkee gadekfkeis eayevlsddn
       61 krasydqfgh
//
LOCUS       WP_258026305             455 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase, partial [Staphylococcus
            aureus].
ACCESSION   WP_258026305
VERSION     WP_258026305.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 455)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 455)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..455
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          1..313
                     /region_name="XerD"
                     /note="Site-specific recombinase XerD [Replication,
                     recombination and repair]; COG4974"
                     /db_xref="CDD:443999"
     Region          126..300
                     /region_name="INT_tnpB_C_Tn554"
                     /note="Putative Transposase B from transposon Tn554,
                     C-terminal catalytic domain; cd01187"
                     /db_xref="CDD:271187"
     Site            order(153,263,266..267,298)
                     /site_type="active"
                     /db_xref="CDD:271187"
ORIGIN      
        1 ylknrlitgd iafatarfyi rvltrffqni sknketrnsl neldrchiea yieflfeyan
       61 sknvqssrnf vreelkairr flndiasqny diapsedirf liypqdfpkr ekknssqidy
      121 ipdfvleqlf ehindlhkdl ipvvwiafkt glrisdvltl knnclakvng kfsiitdiak
      181 tfvkghripi dneladivav lianskikst kdnnpnnyif aihkgkrkgm pftqhmvrah
      241 lnhlaktkni ldeqgevfhf kthqfrhtya vkllnggadi ltiqellahs spemtlryak
      301 llddtkrkaf esvidqgafs fdvdgkikni qhsselseka lnslwqehkl namdnpygtc
      361 harlsgdcpy meappcltcn sgkpckdlai gfsdldveky elhikstvks ielaknnnrq
      421 divekhtnil nkyeeilgni kdgniifgrs nrikv
//
LOCUS       WP_258026316             228 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Staphylococcus aureus].
ACCESSION   WP_258026316
VERSION     WP_258026316.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 228)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 228)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 228)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 228)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..228
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          1..>132
                     /region_name="NatA"
                     /note="ABC-type Na+ transport system, ATPase component
                     NatA [Energy production and conversion, Inorganic ion
                     transport and metabolism]; COG4555"
                     /db_xref="CDD:443618"
ORIGIN      
        1 lkliakiykp tsgklisdgv vsyapdqfpt slnltldeyf nylkkiyklp tyskmidymv
       61 snfnleqfld fkvnncskgt rqkvniiqcl vkpadiyild epfsgldkds iyflanylce
      121 ikskatiiis shehdinkki ithtfnlksn afskqyfnkt aevtiidfsn adfekaiktl
      181 nfsfqitken ennrakiivp fsktnitllt liknnltvyk viskdenl
//
LOCUS       WP_258026336              89 aa            linear   BCT 02-MAR-2025
DEFINITION  iron chelate uptake ABC transporter family permease subunit,
            partial [Staphylococcus aureus].
ACCESSION   WP_258026336
VERSION     WP_258026336.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 89)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013219.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01032.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>89
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
     Region          31..>89
                     /region_name="TM_PBP1_branched-chain-AA_like"
                     /note="Transmembrane subunit (TM) of Periplasmic Binding
                     Protein (PBP)-dependent ATP-Binding Cassette (ABC)
                     transporters which are involved in the uptake of
                     branched-chain amino acids (AAs), as well as TMs of
                     transporters involved in the uptake of...; cl00454"
                     /db_xref="CDD:444914"
ORIGIN      
        1 maikeissqs aidhkrkrrt tltyivslcf lficiylnma igsskinfsd iihyvtghtd
       61 tkatfllhnv rmprmiaglf iggalagsg
//
LOCUS       WP_258026327             307 aa            linear   BCT 02-MAR-2025
DEFINITION  nuclease domain-containing protein, partial [Staphylococcus
            aureus].
ACCESSION   WP_258026327
VERSION     WP_258026327.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Knizewski,L., Kinch,L.N., Grishin,N.V., Rychlewski,L. and
            Ginalski,K.
  TITLE     Realm of PD-(D/E)XK nuclease superfamily revisited: detection of
            novel families with modified transitive meta profile searches
  JOURNAL   BMC Struct Biol 7, 40 (2007)
   PUBMED   17584917
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016309.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04411.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..307
                     /product="nuclease domain-containing protein"
     Region          100..225
                     /region_name="PDDEXK_7"
                     /note="PD-(D/E)XK nuclease superfamily; pfam04411"
                     /db_xref="CDD:427932"
ORIGIN      
        1 nenykynsky sseikkakit knnlnqakkn iiilknliik lrnsewysqv syknnmvptk
       61 sslmnqnynl lytwyvefnk snfdfifseq vlnswkktde lyeiwcyini ieiirssgfm
      121 pvkgwvfngd iqndldegty vtmkkaettl nihyntllky kssetnlvnp lytgnkknkp
      181 diridifvgg iylksipiea kyrklknitg ekmgslkqll ayrdspksll hlagakhirk
      241 nnhtvitkvi ilypkdtssn skadilsveh gllfyefgpn yidtslkttl ieeineafei
      301 yndiykn
//
LOCUS       WP_258026382             188 aa            linear   BCT 02-MAR-2025
DEFINITION  S1 RNA-binding domain-containing protein, partial [Staphylococcus
            aureus].
ACCESSION   WP_258026382
VERSION     WP_258026382.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 188)
  AUTHORS   Bycroft,M., Hubbard,T.J., Proctor,M., Freund,S.M. and Murzin,A.G.
  TITLE     The solution structure of the S1 RNA binding domain: a member of an
            ancient nucleic acid-binding fold
  JOURNAL   Cell 88 (2), 235-242 (1997)
   PUBMED   9008164
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012784.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00575.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..188
                     /product="S1 RNA-binding domain-containing protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
     Region          <1..188
                     /region_name="rpsA"
                     /note="30S ribosomal protein S1; Reviewed; PRK06676"
                     /db_xref="CDD:235851"
ORIGIN      
        1 ltqfgafidi ggvdglvhvs elshehvqtp eevvsigqdv kvkiksidrd terislsikd
       61 tlptpfenik gqfhendvie gvvvrlanfg afveiapgvq glvhiseiah khigtpgevl
      121 epgqqvnvki lgideenerv slsikatlpn edvvesdpst tkayleseee dnptigdmig
      181 dklknlkl
//
LOCUS       WP_258026238             360 aa            linear   BCT 02-MAR-2025
DEFINITION  coagulase domain-containing protein, partial [Staphylococcus
            aureus].
ACCESSION   WP_258026238
VERSION     WP_258026238.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 360)
  AUTHORS   Friedrich,R., Panizzi,P., Fuentes-Prior,P., Richter,K.,
            Verhamme,I., Anderson,P.J., Kawabata,S., Huber,R., Bode,W. and
            Bock,P.E.
  TITLE     Staphylocoagulase is a prototype for the mechanism of
            cofactor-induced zymogen activation
  JOURNAL   Nature 425 (6957), 535-539 (2003)
   PUBMED   14523451
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020344.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08764.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..360
                     /product="coagulase domain-containing protein"
     Region          <1..360
                     /region_name="Coagulase"
                     /note="Staphylococcus aureus coagulase; cl09462"
                     /db_xref="CDD:471886"
ORIGIN      
        1 ikdshpdlkd fdanqqhesd vkindlenkv lmlgyafkne searlnlysk ldlilgyksy
       61 erlykkptns rmlkekiedl esiideffee inkerpkdip vlseyehenk ekaitlksdt
      121 eaakndetkr skrskrslnt qnhksasqev seqqkaeyek raeerkarfl dkqknkqtpl
      181 msleydfehk qrvdnendkq lvvsaptkkp tppptytett tqvpmpaver qaqqqivykt
      241 pkplaglnge shdfttthqs pttsnhthnn vvefeetsal pgrksgslvg lsqidsshlt
      301 erekrvikre hvreaqklvd nykdthsykd rlnaqqkvnt lseghqkrfn kqinkvyngk
//
LOCUS       WP_258026428             157 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Staphylococcus aureus].
ACCESSION   WP_258026428
VERSION     WP_258026428.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 157)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..157
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=16671
     Region          2..>157
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(6..7,10,77,103,106,127,132)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:99740"
     Site            132
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99740"
ORIGIN      
        1 mstasgtssl hlalisvgvn pgdevivpaf tfiataqaiv aakaipifvd vnprtfcidt
       61 ekieekitpk tsvimpvhvh glpadlleiq kicdkyqlkl vedashahsa kvgnkmcgsi
      121 gdaagqslma dknfpvggeg givffkkeey fkrakdf
//
LOCUS       WP_258026450             180 aa            linear   BCT 02-MAR-2025
DEFINITION  Rib/alpha-like domain-containing protein, partial [Staphylococcus
            delphini].
ACCESSION   WP_258026450
VERSION     WP_258026450.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus delphini
  ORGANISM  Staphylococcus delphini
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus intermedius
            group.
REFERENCE   1  (residues 1 to 180)
  AUTHORS   Wastfelt,M., Stalhammar-Carlemalm,M., Delisse,A.M., Cabezon,T. and
            Lindahl,G.
  TITLE     Identification of a family of streptococcal surface proteins with
            extremely repetitive structure
  JOURNAL   J Biol Chem 271 (31), 18892-18897 (1996)
   PUBMED   8702550
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020018.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08428.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Staphylococcus delphini"
                     /db_xref="taxon:53344"
     Protein         <1..>180
                     /product="Rib/alpha-like domain-containing protein"
     Region          <11..43
                     /region_name="Rib"
                     /note="Rib domain; pfam08428"
                     /db_xref="CDD:462474"
     Region          46..129
                     /region_name="Rib"
                     /note="Rib domain; pfam08428"
                     /db_xref="CDD:462474"
ORIGIN      
        1 titiddpsql pdgskegttd idvtvkypdg ttdhitvpvt igdqadndky tpetegvnkd
       61 hgtpvteddv kgsitipgyp tdgdqptiti ddpsqlpdgs kegttdvdvt vkypdgttdh
      121 itvpvtigkq adndkytpet egvnkdhgtp vtedevkgsi tipgyptdgd qptitiddpn
//
LOCUS       WP_258026460             124 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Staphylococcus delphini].
ACCESSION   WP_258026460
VERSION     WP_258026460.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus delphini
  ORGANISM  Staphylococcus delphini
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus intermedius
            group.
REFERENCE   1  (residues 1 to 124)
  AUTHORS   Yeo,C.C. and Poh,C.L.
  TITLE     Characterization of IS1474, an insertion sequence of the IS21
            family isolated from Pseudomonas alcaligenes NCIB 9867
  JOURNAL   FEMS Microbiol Lett 149 (2), 257-263 (1997)
   PUBMED   9141667
REFERENCE   2  (residues 1 to 124)
  AUTHORS   Solinas,F., Marconi,A.M., Ruzzi,M. and Zennaro,E.
  TITLE     Characterization and sequence of a novel insertion sequence,
            IS1162, from Pseudomonas fluorescens
  JOURNAL   Gene 155 (1), 77-82 (1995)
   PUBMED   7698671
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01695.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Staphylococcus delphini"
                     /db_xref="taxon:53344"
     Protein         1..124
                     /product="ATP-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=13914
     Region          <47..>123
                     /region_name="IS21_help_AAA"
                     /note="IS21-like element helper ATPase IstB; NF038214"
                     /db_xref="CDD:439516"
ORIGIN      
        1 mrpdfpqipl rgghpclslt vpttksvtdf hrlsvthvgr tkfkhaikla rfpnikhlsd
       61 fdftfqpsin kqevltlksk hfleksinic flgnsgvgkt hlaislgvev ckqniktrfy
      121 tlnn
//
LOCUS       WP_258026489             451 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Staphylococcus intermedius].
ACCESSION   WP_258026489
VERSION     WP_258026489.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus intermedius
  ORGANISM  Staphylococcus intermedius
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus intermedius
            group.
REFERENCE   1  (residues 1 to 451)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Staphylococcus intermedius"
                     /db_xref="taxon:1285"
     Protein         1..451
                     /product="AMP-binding protein"
                     /calculated_mol_wt=51312
     Region          123..438
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(126,129..134,136..137)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(129,239..240,262..267,332,343,346,357,435)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(129,168..169,216,218..219,222,239..240,262..267,332,
                     343,346,354..357,416)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(168,218..219,222,239,354..356,410,416)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
ORIGIN      
        1 mellkrlety alerpehiai wvddetvtye tlwrdvqkes ellpttmahq nvmlmhtqta
       61 dfivaylavl vrqgvpcvlg pqwsteqrda lirlhrmpyi wgdegltsts yepsheapti
      121 qqllhigfts gttglpkgfm rdlpswmasf evndtllnys tqtymalgpy ahsltlyvmi
      181 yalwngktfm gqdrydmakg lgyiaklqqt calflvptmv ydgihlgqqs qwvrhifisg
      241 dklppsrhtq lktvfpesti deffgtseas fisvnrhqta pldsvgrlfs nvtvtlrerd
      301 dadigqlfvk spmtfsgylg edavdewiat gdyariegdv lylqgrvkdr liiggrnvyp
      361 avieqhlkqw peivdtiivr rphdklgela ialytgpkqv dvqairhwls srvsryeips
      421 kfirvtslpy tasgkvsrkm aqtyyergdf q
//
LOCUS       WP_258026511              92 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Staphylococcus intermedius].
ACCESSION   WP_258026511
VERSION     WP_258026511.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus intermedius
  ORGANISM  Staphylococcus intermedius
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus intermedius
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Staphylococcus intermedius"
                     /db_xref="taxon:1285"
     Protein         1..92
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=10362
     Region          <2..88
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 masqfegfal svmesvnngc pvlaydiryg prdlivegkn ghlvesqnie dlaekmkrit
       61 eypvtdvkld erfsieqakk nykvliekli qs
//
LOCUS       WP_258026518             260 aa            linear   BCT 02-MAR-2025
DEFINITION  SH3 domain-containing protein, partial [Staphylococcus
            intermedius].
ACCESSION   WP_258026518
VERSION     WP_258026518.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus intermedius
  ORGANISM  Staphylococcus intermedius
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus intermedius
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020049.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08460.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Staphylococcus intermedius"
                     /db_xref="taxon:1285"
     Protein         1..>260
                     /product="SH3 domain-containing protein"
     Region          1..184
                     /region_name="CwlA"
                     /note="N-acetylmuramoyl-L-alanine amidase CwlA [Cell
                     wall/membrane/envelope biogenesis]; COG5632"
                     /db_xref="CDD:444359"
     Region          192..260
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
ORIGIN      
        1 mgykivnmwt psylypykap yymqpnklai hntgntatar nevaymngnr nyvsyhvavd
       61 dkevvqaipf nrnafhtgdg iglnsgnrta igieicysmd ngysgakser ykqaednaal
      121 yaahvlhqyg wgidrmyqhy wysgkdcphk mratgtwaef enkvqhylnq iksgktpskp
      181 kaksktskvg ewkrneygtl ykkekfrfta nadiiarleg pfrscpvgyt fkkggyvdyd
      241 elmlqdghvw igytykgkry
//
LOCUS       WP_258026564             197 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Staphylococcus aureus].
ACCESSION   WP_258026564
VERSION     WP_258026564.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13751.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..197
                     /product="transposase"
     Region          <29..169
                     /region_name="transpos_IS1182"
                     /note="IS1182 family transposase; NF033551"
                     /db_xref="CDD:468080"
ORIGIN      
        1 tkltrclmyk nynmtqltlp ietsvripqn wkydefndef icpnnkrigf kryayrndry
       61 gfkrdfklye rddcsacslr hqcmkpnlks nkkimknynw eyfkaqinqk lskpetkkiy
      121 sqrkidvepv fgfmkailgf trmsvrgink vkrelgfvlm alnirkiaaq ravhykihik
      181 kadfyqiinr nqlfyia
//
LOCUS       WP_258026619              46 aa            linear   BCT 02-MAR-2025
DEFINITION  class I SAM-dependent methyltransferase, partial [Staphylococcus
            epidermidis].
ACCESSION   WP_258026619
VERSION     WP_258026619.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus epidermidis
  ORGANISM  Staphylococcus epidermidis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01209.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..46
                     /organism="Staphylococcus epidermidis"
                     /db_xref="taxon:1282"
     Protein         <1..46
                     /product="class I SAM-dependent methyltransferase"
                     /EC_number="2.1.1.-"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
     Region          <2..39
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
ORIGIN      
        1 fnfpdkqtlk glffeagfnd iivrsftggv aamhlgyken ssskgd
//
LOCUS       WP_258026663             285 aa            linear   BCT 02-MAR-2025
DEFINITION  E domain-containing protein, partial [Staphylococcus aureus].
ACCESSION   WP_258026663
VERSION     WP_258026663.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 285)
  AUTHORS   Gruszka,D.T., Wojdyla,J.A., Bingham,R.J., Turkenburg,J.P.,
            Manfield,I.W., Steward,A., Leech,A.P., Geoghegan,J.A., Foster,T.J.,
            Clarke,J. and Potts,J.R.
  TITLE     Staphylococcal biofilm-forming protein has a contiguous rod-like
            structure
  JOURNAL   Proc Natl Acad Sci U S A 109 (17), E1011-E1018 (2012)
   PUBMED   22493247
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028351.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17041.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..285
                     /product="E domain-containing protein"
     Region          <1..52
                     /region_name="G5"
                     /note="G5 domain; pfam07501"
                     /db_xref="CDD:462185"
     Region          55..102
                     /region_name="SasG_E"
                     /note="E domain; pfam17041"
                     /db_xref="CDD:407216"
     Region          109..180
                     /region_name="G5"
                     /note="G5 domain; pfam07501"
                     /db_xref="CDD:462185"
     Region          <132..284
                     /region_name="pullulan_Gpos"
                     /note="pullulanase, extracellular, Gram-positive;
                     TIGR02102"
                     /db_xref="CDD:273973"
ORIGIN      
        1 pgeervkqeg qpgsktittp itvnpltgek vgegqpteei tkqpvdkive fggekipqgh
       61 kdifdpnlpt dqtekvpgkp giknpdtgkv ieepvddvik hgpktgtpet ktveipfetk
      121 refnpklqpg eervkqegqp gsktittpit vnpltgekvg egqpteeitk qpvdkivefg
      181 gekpkdpkgp enpekpsrpt hpsgpvnpdn pglskdrakp nepvhsmdkn dkvkkskiak
      241 ksvanqekkr aelpktgaes tqkglifssi igiaglmlla rrrkn
//
LOCUS       WP_258026707             304 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein,
            partial [Staphylococcus simulans].
ACCESSION   WP_258026707
VERSION     WP_258026707.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus simulans
  ORGANISM  Staphylococcus simulans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Staphylococcus simulans"
                     /db_xref="taxon:1286"
     Protein         <1..304
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
     Region          79..301
                     /region_name="YbxI"
                     /note="Beta-lactamase class D [Defense mechanisms];
                     COG2602"
                     /db_xref="CDD:442014"
ORIGIN      
        1 hsfngkksll krrlinikeg nlkkqsklil ificiftffi miiqsqflmg qsltdynykk
       61 plqsdyqild esknfgsnsg sfvmysmkkd kyyiynekes rkryspdsty kiylalfgld
      121 rhiisdknsr mswnhnhypf dswnkdqdln taiqnsvnwy ferisnqlsk nytsdqlkql
      181 nygnknlgsy kaywledslk isnleqvivl knmmeqnnhf sknekkqlss sllirkneny
      241 elygktgtgi vngkynngwf vgyvitnhdk yyfsthlsde kasgenakli nekilkemgv
      301 lngq
//
LOCUS       WP_258026737             141 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5996 family protein [Staphylococcus chromogenes].
ACCESSION   WP_258026737
VERSION     WP_258026737.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus chromogenes
  ORGANISM  Staphylococcus chromogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   Watanabe,K., Hotta,K., Nakaya,M., Praseuth,A.P., Wang,C.C.,
            Inada,D., Takahashi,K., Fukushi,E., Oguri,H. and Oikawa,H.
  TITLE     Escherichia coli allows efficient modular incorporation of newly
            isolated quinomycin biosynthetic enzyme into echinomycin
            biosynthetic pathway for rational design and synthesis of potent
            antibiotic unnatural natural product
  JOURNAL   J Am Chem Soc 131 (26), 9347-9353 (2009)
   PUBMED   19514719
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039315.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19459.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Staphylococcus chromogenes"
                     /db_xref="taxon:46126"
     Protein         1..141
                     /product="DUF5996 family protein"
                     /calculated_mol_wt=16451
     Region          5..>131
                     /region_name="DUF5996"
                     /note="Family of unknown function (DUF5996); pfam19459"
                     /db_xref="CDD:466096"
ORIGIN      
        1 mlkiaewkke qetlhllaqv lgkhklasaf qepqwahvil dmnttgfstg llfnydctyt
       61 invdlqshrl vvetdhgcde mplregttiq dyyewiqqtl krfkvevpin ttpqemahtt
      121 pfdrdtehhh ynekfvmkcc i
//
LOCUS       WP_258026749              82 aa            linear   BCT 02-MAR-2025
DEFINITION  iron chelate uptake ABC transporter family permease subunit,
            partial [Staphylococcus aureus].
ACCESSION   WP_258026749
VERSION     WP_258026749.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 82)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013219.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01032.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..82
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
     Region          <28..78
                     /region_name="FepD"
                     /note="ABC-type Fe3+-siderophore transport system,
                     permease component [Inorganic ion transport and
                     metabolism]; COG0609"
                     /db_xref="CDD:440374"
ORIGIN      
        1 ttkiirrysl itillivsif islcvgsvmi pltfiigadl lllsdvlsrl itypyespvg
       61 ivtsfvgaly flfitikgvk ri
//
LOCUS       WP_258026753             137 aa            linear   BCT 02-MAR-2025
DEFINITION  ArsB/NhaD family transporter [Staphylococcus chromogenes].
ACCESSION   WP_258026753
VERSION     WP_258026753.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus chromogenes
  ORGANISM  Staphylococcus chromogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014135.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02040.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Staphylococcus chromogenes"
                     /db_xref="taxon:46126"
     Protein         1..137
                     /product="ArsB/NhaD family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015105 - arsenite transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0015700 - arsenite transport [Evidence
                     IEA]"
                     /calculated_mol_wt=15028
     Region          <1..>136
                     /region_name="ArsB_NhaD_permease"
                     /note="Anion permease ArsB/NhaD. These permeases have been
                     shown to translocate sodium, arsenate, antimonite, sulfate
                     and organic anions across biological membranes in all
                     three kingdoms of life. A typical anion permease contains
                     8-13 transmembrane helices...; cl21473"
                     /db_xref="CDD:473875"
ORIGIN      
        1 mflymmllga iiaalfandg atliltpivl amvrhlgfka ravfpfviac gfiadatslp
       61 faisnlvnii svdyfqigft dylkhmiipn lfslsanivv swlyfkkavp ksfdathika
      121 shtaikdvtl frlawvs
//
LOCUS       WP_258026754             113 aa            linear   BCT 02-MAR-2025
DEFINITION  ArsB/NhaD family transporter [Staphylococcus chromogenes].
ACCESSION   WP_258026754
VERSION     WP_258026754.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus chromogenes
  ORGANISM  Staphylococcus chromogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014135.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02040.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Staphylococcus chromogenes"
                     /db_xref="taxon:46126"
     Protein         1..113
                     /product="ArsB/NhaD family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015105 - arsenite transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0015700 - arsenite transport [Evidence
                     IEA]"
                     /calculated_mol_wt=12313
     Region          5..>63
                     /region_name="ArsB_NhaD_permease"
                     /note="Anion permease ArsB/NhaD. These permeases have been
                     shown to translocate sodium, arsenate, antimonite, sulfate
                     and organic anions across biological membranes in all
                     three kingdoms of life. A typical anion permease contains
                     8-13 transmembrane helices...; cl21473"
                     /db_xref="CDD:473875"
ORIGIN      
        1 mmltllavii fgltllffis qpkgvdivit avtgaliafl vgvvtlndvv tvthivwnat
       61 ltfialiiis lildeigfln gqrfiwlmll eavglnvsly dvvrryysgv ice
//
LOCUS       WP_258026772             108 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Staphylococcus
            chromogenes].
ACCESSION   WP_258026772
VERSION     WP_258026772.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus chromogenes
  ORGANISM  Staphylococcus chromogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Staphylococcus chromogenes"
                     /db_xref="taxon:46126"
     Protein         <1..>108
                     /product="Ig-like domain-containing protein"
     Region          <4..>108
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 evvtgtveed gtwtvdvppt vtltegdvit atveddngnv stpgngtvtd tiapdapvvn
       61 npqpndgtvt gtgepggtvt vtfpngevvt gtveedgtwt vdvpptvt
//
LOCUS       WP_258026805             242 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Staphylococcus aureus].
ACCESSION   WP_258026805
VERSION     WP_258026805.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 242)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 242)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 242)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 242)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..242
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <15..153
                     /region_name="CcmA"
                     /note="ABC-type multidrug transport system, ATPase
                     component [Defense mechanisms]; COG1131"
                     /db_xref="CDD:440746"
ORIGIN      
        1 ildkdkllqs enrsimfqkt mfpdqlkvig iiklyqsfye npltldviie ltkfnsnqln
       61 qfanklsggq qrlldfvisl igqpqlilld eptsnmdiem reyfwsiiak lkeenrtily
      121 tshyieever msdkiilien geiklndsts hirtnqqsqi tlsdeykrkl kpdkddlviq
      181 knhngtikii tsnvndtily lqqlhinldd ieiqkvsivd syfnnkkqrg snydtkllen
      241 ri
//
LOCUS       WP_258026818             233 aa            linear   BCT 02-MAR-2025
DEFINITION  PTS transporter subunit EIIB, partial [Staphylococcus aureus].
ACCESSION   WP_258026818
VERSION     WP_258026818.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012587.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00367.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>233
                     /product="PTS transporter subunit EIIB"
                     /GO_function="GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA]"
     Region          5..>210
                     /region_name="murP"
                     /note="PTS system N-acetylmuramic acid transporter
                     subunits EIIBC; Reviewed; PRK09586"
                     /db_xref="CDD:181971"
ORIGIN      
        1 mtkeqqlaer iiaavggmdn idsvmncmtr vrikvldenk vddqelrhid gvmgvihder
       61 iqvvvgpgtv nkvanhmael sgvklgdrip hnhndsekmd yksyaadkak ankeahkakq
      121 kngklnkvlk sianifipli pafigaglig giaavlsnlm vagyisgawi tqliavfnvi
      181 kdgmlaylai ftginaakef gatpglggvi ggttlltgia gknilmnvft gep
//
LOCUS       WP_258026819             111 aa            linear   BCT 02-MAR-2025
DEFINITION  stage II sporulation protein M, partial [Staphylococcus aureus].
ACCESSION   WP_258026819
VERSION     WP_258026819.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 111)
  AUTHORS   Chastanet,A. and Losick,R.
  TITLE     Engulfment during sporulation in Bacillus subtilis is governed by a
            multi-protein complex containing tandemly acting autolysins
  JOURNAL   Mol Microbiol 64 (1), 139-152 (2007)
   PUBMED   17376078
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014052.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01944.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..111
                     /product="stage II sporulation protein M"
ORIGIN      
        1 tiyslsviig vtfsykfneg iaifigilph gileiyltsi elsmlfllna yirknsmnlf
       61 rkrketlpkf fvllksivkc ylliflpvaf lcalieitvt ptvykfltni i
//
LOCUS       WP_258026594              99 aa            linear   BCT 02-MAR-2025
DEFINITION  peptide deformylase, partial [Staphylococcus aureus].
ACCESSION   WP_258026594
VERSION     WP_258026594.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 99)
  AUTHORS   Dardel,F., Ragusa,S., Lazennec,C., Blanquet,S. and Meinnel,T.
  TITLE     Solution structure of nickel-peptide deformylase
  JOURNAL   J Mol Biol 280 (3), 501-513 (1998)
   PUBMED   9665852
REFERENCE   2  (residues 1 to 99)
  AUTHORS   Meinnel,T., Blanquet,S. and Dardel,F.
  TITLE     A new subclass of the zinc metalloproteases superfamily revealed by
            the solution structure of peptide deformylase
  JOURNAL   J Mol Biol 262 (3), 375-386 (1996)
   PUBMED   8845003
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013492.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01327.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..99
                     /product="peptide deformylase"
                     /GO_function="GO:0042586 - peptide deformylase activity
                     [Evidence IEA]"
     Region          <1..99
                     /region_name="Pep_deformylase"
                     /note="Polypeptide or peptide deformylase; a family of
                     metalloenzymes that catalyzes the removal of the
                     N-terminal formyl group in a growing polypeptide chain
                     following translation initiation during protein synthesis
                     in prokaryotes. These enzymes utilize Fe(II)...; cl00234"
                     /db_xref="CDD:444773"
ORIGIN      
        1 emegllqlvn pkiisqsnet itdlegsitl pdvygevtrs kmivvesydv ngnkveltah
       61 edvarmilhi idqmngipft eradriltdk eveayfind
//
LOCUS       WP_258026820             268 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5677 domain-containing protein [Staphylococcus aureus].
ACCESSION   WP_258026820
VERSION     WP_258026820.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039499.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18928.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..268
                     /product="DUF5677 domain-containing protein"
                     /calculated_mol_wt=32123
     Region          55..204
                     /region_name="DUF5677"
                     /note="Family of unknown function (DUF5677); pfam18928"
                     /db_xref="CDD:465916"
ORIGIN      
        1 miklinlieg hinkklttdn dieefkenyl flsvyeivhs fylnyidinn citisstrtl
       61 vrksyelllq lkyileyqee snirakryfl yknyqkidll isngkdstfd eqtlnklkme
      121 kkhieksyvd sfinsnikvn kfkdikawym eksndctktg nlyelseyln mnyqykhiyk
      181 nfckdvhstd siindtirff gkniairnge ieellneepl tseieissft nyidseflkc
      241 sslflndkkl wedysaefek yynqkwys
//
LOCUS       WP_258026835             271 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Staphylococcus hominis].
ACCESSION   WP_258026835
VERSION     WP_258026835.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus hominis
  ORGANISM  Staphylococcus hominis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Staphylococcus hominis"
                     /db_xref="taxon:1290"
     Protein         <1..271
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <19..253
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 lpflltmmgm snvapkgevp mtvkiayyia aavlliasiw tvlsvkeyep ktynyyhgis
       61 ddnrneklnl wqllktapkq fwqisvvqff nwfalmylwt ystgaiaknv wnatdpssag
      121 yqaagnwygv lyciqflssv ifgfviaksk psqrkfwysf glifgglgli smffihnqwl
      181 liisfifigi nnltmntqpf tllteaidge nsgaylglfn tsiclpqiva svvsfalfpl
      241 lgssmpamll fagnmmllga isvkfinakf e
//
LOCUS       WP_258026847             151 aa            linear   BCT 02-MAR-2025
DEFINITION  excalibur calcium-binding domain-containing protein, partial
            [Staphylococcus aureus].
ACCESSION   WP_258026847
VERSION     WP_258026847.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 151)
  AUTHORS   Rigden,D.J., Jedrzejas,M.J. and Galperin,M.Y.
  TITLE     An extracellular calcium-binding domain in bacteria with a distant
            relationship to EF-hands
  JOURNAL   FEMS Microbiol Lett 221 (1), 103-110 (2003)
   PUBMED   12694917
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017691.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05901.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..151
                     /product="excalibur calcium-binding domain-containing
                     protein"
     Region          1..>151
                     /region_name="PTZ00053"
                     /note="methionine aminopeptidase 2; Provisional"
                     /db_xref="CDD:240246"
     Region          111..147
                     /region_name="Excalibur"
                     /note="Excalibur calcium-binding domain; smart00894"
                     /db_xref="CDD:214891"
ORIGIN      
        1 nnqssktqlt qkdenknedk peeksetatd edlqsteevp anentennqh eideittkdq
       61 sdddintpnv aedksqddlk ddlkekqqss nhhqstqpkt spstetntqq sfanckqlrq
      121 vypngvtadh payrphldrd kdkracepdk y
//
LOCUS       WP_258026881              60 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase, partial [Staphylococcus
            aureus].
ACCESSION   WP_258026881
VERSION     WP_258026881.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 60)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 60)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..60
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>60
                     /product="SDR family NAD(P)-dependent oxidoreductase"
     Region          3..>59
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mkgqhfivtg gtsglgfsiv rkllenkvhv tllvrdvdka trifeqelgk tinvipcdln
//
LOCUS       WP_258026923             380 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase, partial [Staphylococcus aureus].
ACCESSION   WP_258026923
VERSION     WP_258026923.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024867.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13476.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>380
                     /product="AAA family ATPase"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /GO_process="GO:0006302 - double-strand break repair
                     [Evidence IEA]"
     Region          1..>362
                     /region_name="sbcc"
                     /note="exonuclease SbcC; TIGR00618"
                     /db_xref="CDD:129705"
     Region          1..>161
                     /region_name="ABC_sbcCD"
                     /note="ATP-binding cassette domain of sbcCD; cd03279"
                     /db_xref="CDD:213246"
     Site            34..41
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213246"
     Site            150..153
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213246"
ORIGIN      
        1 mkplhlklnn fgpflkeeid fskidnnelf lisgktgsgk tmifdamtya lfgkasteqr
       61 eendlrshfa dgkqpmsvtf efqlnhriyk vhrqgpyike gnttktnakf dvfemvdgky
      121 eireskvisg tqfiiellgv nadqfrqlfi lpqgefkrfl isnsrekqgi lrtlfdsekf
      181 eaireilkee vkkekaqien ryqqidllwq eiesfdddni kgllevatqq idklienipl
      241 lqarskeila svnesketai kefeiiekkt lennilkdni nqlnknkidf vqlkeqqpei
      301 egieaklkll qditnllnyi enrekietki anskkdiskt nnkilnldcd krnidkekkm
      361 leengdlies kisfidktrv
//
LOCUS       WP_258026885             220 aa            linear   BCT 02-MAR-2025
DEFINITION  biotin carboxylase N-terminal domain-containing protein, partial
            [Staphylococcus aureus].
ACCESSION   WP_258026885
VERSION     WP_258026885.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 220)
  AUTHORS   Tran,T.H., Hsiao,Y.S., Jo,J., Chou,C.Y., Dietrich,L.E., Walz,T. and
            Tong,L.
  TITLE     Structure and function of a single-chain, multi-domain long-chain
            acyl-CoA carboxylase
  JOURNAL   Nature 518 (7537), 120-124 (2015)
   PUBMED   25383525
REFERENCE   2  (residues 1 to 220)
  AUTHORS   Healy,S., McDonald,M.K., Wu,X., Yue,W.W., Kochan,G., Oppermann,U.
            and Gravel,R.A.
  TITLE     Structural impact of human and Escherichia coli biotin carboxyl
            carrier proteins on biotin attachment
  JOURNAL   Biochemistry 49 (22), 4687-4694 (2010)
   PUBMED   20443544
REFERENCE   3  (residues 1 to 220)
  AUTHORS   Waldrop,G.L., Rayment,I. and Holden,H.M.
  TITLE     Three-dimensional structure of the biotin carboxylase subunit of
            acetyl-CoA carboxylase
  JOURNAL   Biochemistry 33 (34), 10249-10256 (1994)
   PUBMED   7915138
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012510.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00289.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>220
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
     Region          1..>220
                     /region_name="PRK12999"
                     /note="pyruvate carboxylase; Reviewed; cl39082"
                     /db_xref="CDD:476865"
ORIGIN      
        1 mkkvlianrg eiavriirac rdlgiqtvai ysegdkdalh tqiadeaycv gptlskdsyl
       61 nipnilsiat stgcdgvhpg ygflaenadf aelceacqlk figpsyqsiq kmgikdvaka
      121 emikanvpvv pgsdglmkdv seakkiakki gypviikata ggggkgirva rdekeletgf
      181 rmteqeaqta fgngglymek fienfrhiei qivgdsygnv
//
LOCUS       WP_258026935              96 aa            linear   BCT 02-MAR-2025
DEFINITION  putative HNHc nuclease, partial [Staphylococcus aureus].
ACCESSION   WP_258026935
VERSION     WP_258026935.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028094.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16784.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..96
                     /product="putative HNHc nuclease"
     Region          <1..95
                     /region_name="HNHc_6"
                     /note="Putative HNHc nuclease; pfam16784"
                     /db_xref="CDD:293389"
ORIGIN      
        1 skllsedkal lywatinrnc vicgkphadl ahyeavgrgm nrnkmnhydk hvlalcrehh
       61 neqhaigvks fddkyhlhds wikvdkrlnk mlkgek
//
LOCUS       WP_258026963             157 aa            linear   BCT 02-MAR-2025
DEFINITION  M3 family metallopeptidase, partial [Staphylococcus aureus].
ACCESSION   WP_258026963
VERSION     WP_258026963.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013591.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01432.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..157
                     /product="M3 family metallopeptidase"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          <1..145
                     /region_name="GluZincin"
                     /note="Gluzincin Peptidase family (thermolysin-like
                     proteinases, TLPs) which includes peptidases M1, M2, M3,
                     M4, M13, M32 and M36 (fungalysins); cl14813"
                     /db_xref="CDD:472708"
ORIGIN      
        1 srtyyhnmvt hlleaayqre vyhkvdqges lnaptlneim lnvykqffgd avdmtegael
       61 twmrqphyym glysytysag ltigtvvsqk iknegqpavd awletlkkgg svspvelani
      121 agvditteqp lkstiqyisd lvdevekltd eieqann
//
LOCUS       WP_258026972             948 aa            linear   BCT 02-MAR-2025
DEFINITION  fibrinogen-binding adhesin SdrG C-terminal domain-containing
            protein, partial [Staphylococcus aureus].
ACCESSION   WP_258026972
VERSION     WP_258026972.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 948)
  AUTHORS   Ponnuraj,K., Bowden,M.G., Davis,S., Gurusiddappa,S., Moore,D.,
            Choe,D., Xu,Y., Hook,M. and Narayana,S.V.
  TITLE     A 'dock, lock, and latch' structural model for a staphylococcal
            adhesin binding to fibrinogen
  JOURNAL   Cell 115 (2), 217-228 (2003)
   PUBMED   14567919
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021909.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10425.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>948
                     /product="fibrinogen-binding adhesin SdrG C-terminal
                     domain-containing protein"
                     /GO_process="GO:0007155 - cell adhesion [Evidence IEA]"
     Region          1..869
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
ORIGIN      
        1 mknnlrygir khklgaasvf lgtmivvgmg qdkeaaaseq ktttveengn satdnkvset
       61 qttttnvnti detqsynata teqpsnatqv tteeapkavq apqtaqpanl etvkeevvke
      121 eakpqvkett qpqdnsgdqk qvdltpkmat qnqaaetqve vaqprtvses kprvtrsadv
      181 vdakegkdvs evkgtdvtsk vtvesgsiea pqgnkvepha gqrvvlkykl kfekglhkgd
      241 yfdftlsnnv ntygvstark vpeikngsvv matgqllgng kirytftdyi dykvnvtadl
      301 einlfidpkt vqsngqqtit stlndketkn tlpieynpgv snsyanvngs ietfdkgnnr
      361 fthvayikpq nghksdsvsi tgtltqgska dgkaptvkvy evlkdanelp qsvyanvsds
      421 smfkdvteem ndklkvenng nykldiekle ksyvihydge ylsgsdqvnf rthmfgypeq
      481 qykyyythlg ykltwdnglv lysnkakgdg tngtitesnn mtfdeeygtg vitgqydknl
      541 vttveeeyds stldidyhta idgeggyvdg yietieetds saididyhta vdseaghvgg
      601 ytesseesnp idfeesthen skhhadvvey eedtnpgggq vttesnlvef dedstkgivt
      661 gavsdhttie dtkeyttesn lielvdelpe ehgqaqgpie eitennhhis hsglgtengh
      721 gnygvieeie enshvdikse lgyeggqnsg nqsfeedtee dkpkyeqggn ivdidfdsvp
      781 qihgqnngnq sfeedtekdk pkyeqggnii didfdsvpqi hgfnkhneii eedtnkdkpn
      841 yqfgghnsvd feedtlpkvs gqnegqqtie edttpptppt pevpsepetp tpptpevpse
      901 pgeptpptpe vpsepgeptp ptpevpsepe tptpptpevp sepetptp
//
LOCUS       WP_258026975             238 aa            linear   BCT 02-MAR-2025
DEFINITION  type II secretion system F family protein, partial [Staphylococcus
            aureus].
ACCESSION   WP_258026975
VERSION     WP_258026975.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 238)
  AUTHORS   Desvaux,M., Hebraud,M., Talon,R. and Henderson,I.R.
  TITLE     Secretion and subcellular localizations of bacterial proteins: a
            semantic awareness issue
  JOURNAL   Trends Microbiol 17 (4), 139-145 (2009)
   PUBMED   19299134
REFERENCE   2  (residues 1 to 238)
  AUTHORS   Desvaux,M., Parham,N.J., Scott-Tucker,A. and Henderson,I.R.
  TITLE     The general secretory pathway: a general misnomer?
  JOURNAL   Trends Microbiol 12 (7), 306-309 (2004)
   PUBMED   15223057
REFERENCE   3  (residues 1 to 238)
  AUTHORS   Peabody,C.R., Chung,Y.J., Yen,M.R., Vidal-Ingigliardi,D.,
            Pugsley,A.P. and Saier,M.H.
  TITLE     Type II protein secretion and its relationship to bacterial type IV
            pili and archaeal flagella
  JOURNAL   Microbiology (Reading) 149 (Pt 11), 3051-3072 (2003)
   PUBMED   14600218
REFERENCE   4  (residues 1 to 238)
  AUTHORS   Py,B., Loiseau,L. and Barras,F.
  TITLE     An inner membrane platform in the type II secretion machinery of
            Gram-negative bacteria
  JOURNAL   EMBO Rep 2 (3), 244-248 (2001)
   PUBMED   11266368
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012694.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00482.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>238
                     /product="type II secretion system F family protein"
     Region          21..>237
                     /region_name="T4P_ComGB"
                     /note="competence type IV pilus assembly protein ComGB;
                     NF041012"
                     /db_xref="CDD:468941"
ORIGIN      
        1 mklqwintfk lhskkrqlsk aqqidllsnl cnllkygftl yqsfqflnlq mtyknkqlgt
       61 tilseisnga pcnqilslig ysdtivmqvy laerfgniid vleetvnymk vnrkseqrll
      121 ktlqyplilv sifiamiiil nltvipqfqq lytsmniqls sfqktlsffi tslptiivvm
      181 liivsmlaii mkliynkfnm lnkinfvmkl plisgyfqlf ktyfvtnelv lfykngit
//
LOCUS       WP_258027025             192 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Staphylococcus aureus].
ACCESSION   WP_258027025
VERSION     WP_258027025.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017416.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05598.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..>192
                     /product="transposase"
     Region          1..154
                     /region_name="COG3666"
                     /note="Transposase, IS1182 family [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:442883"
ORIGIN      
        1 ynmtqltlpi etsvripqnd isryvneive tipdsefdef rhhrgatsyh pkmmlkiily
       61 aytqsvfsgr riekllhdsi rmmwlaqdqt psyktinrfr vnpntdalie slfiqfhsqc
      121 lkqnlidnns ifidgtkvea nanrytfvwk ksiqnheskl nensktlyrd lveekiipei
      181 kedgdsdlti ee
//
LOCUS       WP_258027001             119 aa            linear   BCT 02-MAR-2025
DEFINITION  type II secretion system F family protein, partial [Staphylococcus
            aureus].
ACCESSION   WP_258027001
VERSION     WP_258027001.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 119)
  AUTHORS   Desvaux,M., Hebraud,M., Talon,R. and Henderson,I.R.
  TITLE     Secretion and subcellular localizations of bacterial proteins: a
            semantic awareness issue
  JOURNAL   Trends Microbiol 17 (4), 139-145 (2009)
   PUBMED   19299134
REFERENCE   2  (residues 1 to 119)
  AUTHORS   Desvaux,M., Parham,N.J., Scott-Tucker,A. and Henderson,I.R.
  TITLE     The general secretory pathway: a general misnomer?
  JOURNAL   Trends Microbiol 12 (7), 306-309 (2004)
   PUBMED   15223057
REFERENCE   3  (residues 1 to 119)
  AUTHORS   Peabody,C.R., Chung,Y.J., Yen,M.R., Vidal-Ingigliardi,D.,
            Pugsley,A.P. and Saier,M.H.
  TITLE     Type II protein secretion and its relationship to bacterial type IV
            pili and archaeal flagella
  JOURNAL   Microbiology (Reading) 149 (Pt 11), 3051-3072 (2003)
   PUBMED   14600218
REFERENCE   4  (residues 1 to 119)
  AUTHORS   Py,B., Loiseau,L. and Barras,F.
  TITLE     An inner membrane platform in the type II secretion machinery of
            Gram-negative bacteria
  JOURNAL   EMBO Rep 2 (3), 244-248 (2001)
   PUBMED   11266368
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012694.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00482.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..119
                     /product="type II secretion system F family protein"
     Region          <2..116
                     /region_name="T4P_ComGB"
                     /note="competence type IV pilus assembly protein ComGB;
                     NF041012"
                     /db_xref="CDD:468941"
ORIGIN      
        1 tlqsivdvyi nhssdpfrqf lgkflltyse mgyslpqile klkcfkpqli kfvlqgekrg
       61 klevelklys qilvrqiedk aikqtqflqp ilffilglfi vaiylvimlp mfqmmqsik
//
LOCUS       WP_258027087             118 aa            linear   BCT 02-MAR-2025
DEFINITION  lysozyme inhibitor LprI family protein [Stenotrophomonas pavanii].
ACCESSION   WP_258027087
VERSION     WP_258027087.1
KEYWORDS    RefSeq.
SOURCE      Stenotrophomonas pavanii
  ORGANISM  Stenotrophomonas pavanii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (residues 1 to 118)
  AUTHORS   Sethi,D., Mahajan,S., Singh,C., Lama,A., Hade,M.D., Gupta,P. and
            Dikshit,K.L.
  TITLE     Lipoprotein LprI of Mycobacterium tuberculosis Acts as a Lysozyme
            Inhibitor
  JOURNAL   J Biol Chem 291 (6), 2938-2953 (2016)
   PUBMED   26589796
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018684.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07007.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Stenotrophomonas pavanii"
                     /db_xref="taxon:487698"
     Protein         1..118
                     /product="lysozyme inhibitor LprI family protein"
                     /calculated_mol_wt=13088
ORIGIN      
        1 mpprrpddsy nkatlrpqya tcvnssgget pvlqacgdee lawqeqrleq afmkivdgpd
       61 gkdkdrvmde qaaymsdtnr ycswdpaedg qgqmldaqsc rinrtanrad vlqaltsk
//
LOCUS       WP_258027122             195 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1828 domain-containing protein, partial [Staphylococcus aureus].
ACCESSION   WP_258027122
VERSION     WP_258027122.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020436.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08861.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>195
                     /product="DUF1828 domain-containing protein"
     Region          35..128
                     /region_name="DUF1828"
                     /note="Domain of unknown function DUF1828; pfam08861"
                     /db_xref="CDD:430268"
     Region          166..>195
                     /region_name="DUF1829"
                     /note="Domain of unknown function DUF1829; pfam08862"
                     /db_xref="CDD:462620"
ORIGIN      
        1 mttfdakklk keyldwynqi lefsnlsnns vkidtpfkdn sldnlkiyal ydqsrdmitl
       61 tddgytifgl enngvsinkf kkrkkifeeh lsaygikynd ktheifvqtn fknfnkskhn
      121 llqclifvnd myllsnpksq niftedvank ldehniyygr dipiigssgv vhnfdffisa
      181 kknqkekfin vfsnp
//
LOCUS       WP_258027091              52 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GTP-binding protein, partial [Lysobacteraceae].
ACCESSION   WP_258027091
VERSION     WP_258027091.1
KEYWORDS    RefSeq.
SOURCE      Lysobacteraceae
  ORGANISM  Lysobacteraceae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales.
REFERENCE   1  (residues 1 to 52)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..52
                     /organism="Lysobacteraceae"
                     /db_xref="taxon:32033"
     Protein         1..>52
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>52
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 makgkfertk phvnvgtigh vdhgkttlta altkigaerf ggefkdyssi da
//
LOCUS       WP_258027124             275 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-binding protein, partial [Staphylococcus kloosii].
ACCESSION   WP_258027124
VERSION     WP_258027124.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus kloosii
  ORGANISM  Staphylococcus kloosii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13460.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Staphylococcus kloosii"
                     /db_xref="taxon:29384"
     Protein         1..>275
                     /product="NAD(P)H-binding protein"
     Region          3..271
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(7,9..10,12,33..35,73..75,104..106,117,121,140..143)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(82,106,117,121)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mmivitgatg tlgqlvveea lkvypanelg vsvrdaskaq yladqgvsvr egdfkkpetl
       61 atafkgadql vvisgngqgd elvqahtnvi naakeagvsr llytsqigss peshfqpmvd
      121 hykteqlldn sglnfvslrh gfysasgqff fslgikngel rlpkdgpvnw tthedlakgl
      181 vailqdesfd qqipiltsnr altmeeiaqe ytqenltrvv isdeefyeql naipnlpeaq
      241 knmfidifha svegdfdkas plleelidkk pddiv
//
LOCUS       WP_258027147              96 aa            linear   BCT 02-MAR-2025
DEFINITION  MAP domain-containing protein [Staphylococcus aureus].
ACCESSION   WP_258027147
VERSION     WP_258027147.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 96)
  AUTHORS   Jonsson,K., McDevitt,D., McGavin,M.H., Patti,J.M. and Hook,M.
  TITLE     Staphylococcus aureus expresses a major histocompatibility complex
            class II analog
  JOURNAL   J Biol Chem 270 (37), 21457-21460 (1995)
   PUBMED   7545162
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015598.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03642.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..96
                     /product="MAP domain-containing protein"
                     /calculated_mol_wt=11059
     Region          2..88
                     /region_name="MAP"
                     /note="MAP domain; pfam03642"
                     /db_xref="CDD:367591"
ORIGIN      
        1 mkfpvtinkf enivsnefvf ynaskitind lsiklksaia ndqgitkhdi elaertvykv
       61 yfkngsskyv dlkteykder vfkatdikkv dielkf
//
LOCUS       WP_258026967             357 aa            linear   BCT 02-MAR-2025
DEFINITION  coagulase domain-containing protein, partial [Staphylococcus
            aureus].
ACCESSION   WP_258026967
VERSION     WP_258026967.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 357)
  AUTHORS   Friedrich,R., Panizzi,P., Fuentes-Prior,P., Richter,K.,
            Verhamme,I., Anderson,P.J., Kawabata,S., Huber,R., Bode,W. and
            Bock,P.E.
  TITLE     Staphylocoagulase is a prototype for the mechanism of
            cofactor-induced zymogen activation
  JOURNAL   Nature 425 (6957), 535-539 (2003)
   PUBMED   14523451
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020344.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08764.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..357
                     /product="coagulase domain-containing protein"
     Region          <1..357
                     /region_name="Coagulase"
                     /note="Staphylococcus aureus coagulase; cl09462"
                     /db_xref="CDD:471886"
ORIGIN      
        1 nnknpelkef dieqqtkadt elntlenqvl migytfyhsn knevedlynk ldmilgykde
       61 erkkkratnq rmfnnkkedl etiideffge igqqrptsip tlapkeeket niknanklks
      121 dteaaksdes krskrskrsl nthnhksasq evtakqnaey ekraeerktk fldkqknkqt
      181 pvvsleyekd dnendkqlvv sapskkpttp ttytetttqv pmptverqtq qqivyktpkq
      241 laglngeshd fstthqsptt snhthnnvve feetsalpgr ksgslvgisq idsshltere
      301 krvikrehvr eaqklvdnyk dthsykdrln aqqkvntlse ghqkrfnkqi nkvyngk
//
LOCUS       WP_258027152             203 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Staphylococcus aureus].
ACCESSION   WP_258027152
VERSION     WP_258027152.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017416.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05598.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>203
                     /product="transposase"
     Region          6..145
                     /region_name="COG3666"
                     /note="Transposase, IS1182 family [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:442883"
ORIGIN      
        1 metsvripqn disryvneiv etipdcefde frhhrgatsy hpkmmlkiil yaytqsvfsg
       61 rriekllhds irmmwlaqnq tpsyktinrf rvnpntdali eslfiqfhrq clkqnliddn
      121 sifidgtkve ananrytfvw kksiqnhesk lnenskalyr dlveekiipe ikedgdsdlt
      181 teeidlvgsh ldkeiedlnh sie
//
LOCUS       WP_258027171              98 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Staphylococcus aureus].
ACCESSION   WP_258027171
VERSION     WP_258027171.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..>98
                     /product="Ig-like domain-containing protein"
     Region          <8..61
                     /region_name="Ca_tandemer"
                     /note="Ca2+-stabilized adhesin repeat; NF033510"
                     /db_xref="CDD:411149"
ORIGIN      
        1 kvsgkghevg ntvtvtfpdg ktatskvdek gnwtvdvpeg telkvgneit atetdmsgnk
       61 sesgkgkvtd ttapeapsvn dtevgskkvs gkghevgn
//
LOCUS       WP_258027172             131 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase, partial [Staphylococcus aureus].
ACCESSION   WP_258027172
VERSION     WP_258027172.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 131)
  AUTHORS   Urbach,C., Evrard,C., Pudzaitis,V., Fastrez,J., Soumillion,P. and
            Declercq,J.P.
  TITLE     Structure of PBP-A from Thermosynechococcus elongatus, a
            penicillin-binding protein closely related to class A
            beta-lactamases
  JOURNAL   J Mol Biol 386 (1), 109-120 (2009)
   PUBMED   19100272
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024748.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13354.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..131
                     /product="serine hydrolase"
                     /GO_function="GO:0008800 - beta-lactamase activity
                     [Evidence IEA]"
                     /GO_process="GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
     Region          <1..131
                     /region_name="PenP"
                     /note="Beta-lactamase class A [Defense mechanisms];
                     COG2367"
                     /db_xref="CDD:441934"
ORIGIN      
        1 tnpvryeiel nyyspkskkd tstpaafgkt lnkliangkl skknknflld lmlnnkngdt
       61 likdgvpkdy kvadksgqai tyasrndvaf iypknqsepi ilviftnkdn ksdkpndkli
      121 setaknvink f
//
LOCUS       WP_258027173             149 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase, partial [Staphylococcus aureus].
ACCESSION   WP_258027173
VERSION     WP_258027173.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 149)
  AUTHORS   Urbach,C., Evrard,C., Pudzaitis,V., Fastrez,J., Soumillion,P. and
            Declercq,J.P.
  TITLE     Structure of PBP-A from Thermosynechococcus elongatus, a
            penicillin-binding protein closely related to class A
            beta-lactamases
  JOURNAL   J Mol Biol 386 (1), 109-120 (2009)
   PUBMED   19100272
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024748.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13354.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>149
                     /product="serine hydrolase"
                     /GO_function="GO:0008800 - beta-lactamase activity
                     [Evidence IEA]"
                     /GO_process="GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
     Region          6..>135
                     /region_name="PenP"
                     /note="Beta-lactamase class A [Defense mechanisms];
                     COG2367"
                     /db_xref="CDD:441934"
ORIGIN      
        1 mkklilliai alvlsacnst sshakelnnl ekkynanigv yaldtksgke vkfnadkrfa
       61 yastskains ailleqvpyn klnkkvhink ddivayspil ekyvgkditl kelieasmky
      121 sdntannkii neiggikkik krlkklgdk
//
LOCUS       WP_258027213              27 aa            linear   BCT 02-MAR-2025
DEFINITION  complement inhibitor SCIN family protein, partial [Staphylococcus
            aureus].
ACCESSION   WP_258027213
VERSION     WP_258027213.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 27)
  AUTHORS   Rooijakkers,S.H., Milder,F.J., Bardoel,B.W., Ruyken,M., van
            Strijp,J.A. and Gros,P.
  TITLE     Staphylococcal complement inhibitor: structure and active sites
  JOURNAL   J Immunol 179 (5), 2989-2998 (2007)
   PUBMED   17709514
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022980.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11546.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..27
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..27
                     /product="complement inhibitor SCIN family protein"
ORIGIN      
        1 snnfakmaea kvgleniyke ideiinr
//
LOCUS       WP_258027215              67 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Staphylococcus aureus].
ACCESSION   WP_258027215
VERSION     WP_258027215.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 67)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 67)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..67
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=6912
     Region          2..>64
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
ORIGIN      
        1 mstasgtssl hlalisvgvn pgdevivpaf tfiataqaiv aakaipifvd vnprtfcidt
       61 eklehfv
//
LOCUS       WP_258027279             226 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase, partial [Staphylococcus aureus].
ACCESSION   WP_258027279
VERSION     WP_258027279.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024904.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13514.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>226
                     /product="AAA family ATPase"
     Region          1..208
                     /region_name="AAA_27"
                     /note="AAA domain; pfam13514"
                     /db_xref="CDD:433272"
ORIGIN      
        1 miiksleiyg ygqfvqrkie fnknfteifg eneagkstiq afihsilfgf ptkkskeprl
       61 eprlgnqygg klvlilddgl eieverikgs aqgdvkvylp ngavrddawl qkklnyiskk
      121 tyqgifsfdv lglqdihrnl nekqlqdyll qagalgstef tsmrevinrk kdelykksgk
      181 npiinqqieq lkqlesqire eeakletyhr lvddrdkssr rlenlk
//
LOCUS       WP_258027286             882 aa            linear   BCT 02-MAR-2025
DEFINITION  fibrinogen-binding adhesin SdrG C-terminal domain-containing
            protein, partial [Staphylococcus aureus].
ACCESSION   WP_258027286
VERSION     WP_258027286.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 882)
  AUTHORS   Ponnuraj,K., Bowden,M.G., Davis,S., Gurusiddappa,S., Moore,D.,
            Choe,D., Xu,Y., Hook,M. and Narayana,S.V.
  TITLE     A 'dock, lock, and latch' structural model for a staphylococcal
            adhesin binding to fibrinogen
  JOURNAL   Cell 115 (2), 217-228 (2003)
   PUBMED   14567919
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021909.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10425.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>882
                     /product="fibrinogen-binding adhesin SdrG C-terminal
                     domain-containing protein"
                     /GO_process="GO:0007155 - cell adhesion [Evidence IEA]"
     Region          1..>625
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          774..807
                     /region_name="Fn_bind"
                     /note="Fibronectin binding repeat; pfam02986"
                     /db_xref="CDD:397232"
ORIGIN      
        1 mknnlrygir khklgaasvf lgtmivvgmg qdkeaaaseq ktttveengn satdnkvset
       61 qttatnvnhi eetqsynatv teqpsnatqv ttqevpkavq apltaqpanv etvkeevvke
      121 eakpqvkett qpqdnsgdqr qvdltpkkat qnqaaetqve vaqprtases kprvtrsadv
      181 vdasdakvet gtdvtskvtv edeskieapk gnnvqphegq rvvlkyklkf qdglktgdyf
      241 dftlsnnvnt hgvsttrkvp dikngslvma kgqvldngri rytfidyikd kvnvtanlei
      301 nlfidpktvq sngqqtitsk lngketsgtm qitykdgvkn hytnvngsie tfdkeknkft
      361 hvayikping nnsdsvtvtg mltqgsneng tqpnvkiyey vgtenglpqs vyantvdstq
      421 lkdvtnqmsd klkvqnngsy slnfdkldkt yvihytgdyl ngtsevnfrt qltgypenhy
      481 ktyyyynhgy tltwdnglvl ysnkangdgk ygpivdsnnf efsedsgngs isgqydekqi
      541 ieteenqdnt pldidyhtai dgeggyvdgy ietieetdss aididyhtav dseaghvggy
      601 tesseesnpi dfeesthens khhadvveye edtnpgggqv ttesnlvefd eestkgivtg
      661 avtdhttved tkeyttesnl ielvdelpee hgqaqgpiee itennhhish sglgtenghg
      721 nygvveeiee nshvdiksel gyeggqnsgn qsfeedteed kpkyeqggni ididfdsvph
      781 ihgfnkhnei ieedtnkdkp nyqfgghnsv dfeedtlpkv sgqnegqqti eedttpptpp
      841 tpevpsepet ptpptpevps epetptpptp evpsepetpt pp
//
LOCUS       WP_258027352             230 aa            linear   BCT 02-MAR-2025
DEFINITION  type I restriction endonuclease [Helicobacter pylori].
ACCESSION   WP_258027352
VERSION     WP_258027352.1
KEYWORDS    RefSeq.
SOURCE      Helicobacter pylori
  ORGANISM  Helicobacter pylori
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (residues 1 to 230)
  AUTHORS   Piekarowicz,A., Klyz,A., Kwiatek,A. and Stein,D.C.
  TITLE     Analysis of type I restriction modification systems in the
            Neisseriaceae: genetic organization and properties of the gene
            products
  JOURNAL   Mol Microbiol 41 (5), 1199-1210 (2001)
   PUBMED   11555298
REFERENCE   2  (residues 1 to 230)
  AUTHORS   Makovets,S., Doronina,V.A. and Murray,N.E.
  TITLE     Regulation of endonuclease activity by proteolysis prevents
            breakage of unmodified bacterial chromosomes by type I restriction
            enzymes
  JOURNAL   Proc Natl Acad Sci U S A 96 (17), 9757-9762 (1999)
   PUBMED   10449767
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016220.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04313.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Helicobacter pylori"
                     /db_xref="taxon:210"
     Protein         1..230
                     /product="type I restriction endonuclease"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=26614
     Region          3..>170
                     /region_name="COG0610"
                     /note="Type I site-specific restriction-modification
                     system, R (restriction) subunit and related helicases ...
                     [Defense mechanisms]"
                     /db_xref="CDD:440375"
ORIGIN      
        1 mpyneitrvq vpalmhlakl gynfisqknk pnldxatnil tdsftqafnq lnpnptknak
       61 etlaemkkrl nyddlgksfy eyllksenqi idfdnpnnnl yemmaelpyk sfrpditlfi
      121 nglplviiev kqpyagqgik eerdrhikry enpenkvfcn lvqiwlfsdn lpydeknpdq
      181 gvfysasysp ifqrfveank lditppppkm ikiikiikii drlkkfknas
//
LOCUS       WP_258027353             361 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease subunit S, partial [Staphylococcus
            aureus].
ACCESSION   WP_258027353
VERSION     WP_258027353.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 361)
  AUTHORS   Janscak,P. and Bickle,T.A.
  TITLE     The DNA recognition subunit of the type IB restriction-modification
            enzyme EcoAI tolerates circular permutions of its polypeptide chain
  JOURNAL   J Mol Biol 284 (4), 937-948 (1998)
   PUBMED   9837717
REFERENCE   2  (residues 1 to 361)
  AUTHORS   Bickle,T.A. and Kruger,D.H.
  TITLE     Biology of DNA restriction
  JOURNAL   Microbiol Rev 57 (2), 434-450 (1993)
   PUBMED   8336674
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01420.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>361
                     /product="restriction endonuclease subunit S"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
     Region          21..214
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
     Site            order(134,137..138,140..141,169,171,178,182,185..186,207,
                     209..210)
                     /site_type="other"
                     /note="TRD-CR/TRD-CR interface [polypeptide binding]"
                     /db_xref="CDD:341131"
ORIGIN      
        1 msntqtknvp elrfpgfege weekkvgell efknglnkgk eyfgsgssiv nfkdvfnnrs
       61 lntnnltgkv nvnskelkny svekgdvfft rtsevigeig ypsvilndpe ntvfsgfvlr
      121 grpksgidli nnnfkryvff tnsfrkemit kssmttralt sgsainkmkv iypvsakeqr
      181 kigdffrkld rqieleeqkl ellqqqkkgy mqkifsqelr fkdensedyp hwenskieky
      241 lkernersdk gqmlsvtins giikfseldr kdnsskdksn ykvvrkndia ynsmrmwqga
      301 sgrsnyngiv spaytvlypt qntsslfigy kfkthrmihk fkinsqglts dtwnlkykql
      361 k
//
LOCUS       WP_258027371             109 aa            linear   BCT 02-MAR-2025
DEFINITION  replication protein P, partial [Pasteurella multocida].
ACCESSION   WP_258027371
VERSION     WP_258027371.1
KEYWORDS    RefSeq.
SOURCE      Pasteurella multocida
  ORGANISM  Pasteurella multocida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Pasteurella.
REFERENCE   1  (residues 1 to 109)
  AUTHORS   Mallory,J.B., Alfano,C. and McMacken,R.
  TITLE     Host virus interactions in the initiation of bacteriophage lambda
            DNA replication. Recruitment of Escherichia coli DnaB helicase by
            lambda P replication protein
  JOURNAL   J Biol Chem 265 (22), 13297-13307 (1990)
   PUBMED   2165499
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018671.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06992.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Pasteurella multocida"
                     /db_xref="taxon:747"
     Protein         <1..109
                     /product="replication protein P"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
     Region          <1..73
                     /region_name="Phage_lambda_P"
                     /note="Replication protein P; pfam06992"
                     /db_xref="CDD:462061"
ORIGIN      
        1 eellerikay sryhgfdnqh efkfknsveq ylifdlycrn kefgwsaeel rkhakaflka
       61 taeklargee lpelalalpe kasfispeeq kkinlngial araalkgdf
//
LOCUS       WP_258027516             574 aa            linear   BCT 02-MAR-2025
DEFINITION  membrane dipeptidase [Microbacterium sp. BH-3-3-3].
ACCESSION   WP_258027516
VERSION     WP_258027516.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. BH-3-3-3
  ORGANISM  Microbacterium sp. BH-3-3-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013413.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01244.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Microbacterium sp. BH-3-3-3"
                     /db_xref="taxon:1906742"
     Protein         1..574
                     /product="membrane dipeptidase"
                     /EC_number="3.4.13.-"
                     /GO_function="GO:0070573 - metallodipeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=61700
     Region          3..>186
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            183
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238089"
     Region          296..572
                     /region_name="COG2355"
                     /note="Zn-dependent dipeptidase, microsomal dipeptidase
                     homolog [Posttranslational modification, protein turnover,
                     chaperones, Amino acid transport and metabolism]"
                     /db_xref="CDD:441922"
ORIGIN      
        1 masvlnvsay lftriddpav vretlrdrag aaglrgtill aeeginlfla gspeavrafv
       61 dqlraderfa aletkdswsd tvpfgrllvk vkreiirmdr pevrpqdgra pavspetlrr
      121 wldrgsdddg revvlvdtrn afevdygtfa gakdwrierf tqfpdaadsh rdelagktvv
      181 sfctggsaar rrrctcatrg wtpisstgas sggsppkevr tgtasassst sarpstrrsp
      241 rrarpslpra clgratemlw dqhacvelvd tadigellry rgggggyvsl nvgfaphppa
      301 ltasllrsfr aqvtaidgle laatvadidr vaargdtava fdledcaplg gdldaveglv
      361 aqgvrtlapt ynhanraggg cldavddglt gwgrdlvaem nargmvpdgs hvgarttfdl
      421 cavstrpvvf shsnmravwe hprnitddqa ravadtggvv gitgvgiflg pntptleamv
      481 rhldhavevv girhvgvstd fsfdwqtfra titgtpelyd esytrwgpmq wmppetfvdl
      541 gaalqargws dtdvaavlgg nfrrvaaesw eprp
//
LOCUS       WP_258027522             464 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerophosphoryl diester phosphodiesterase membrane
            domain-containing protein [Microbacterium sp. BH-3-3-3].
ACCESSION   WP_258027522
VERSION     WP_258027522.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. BH-3-3-3
  ORGANISM  Microbacterium sp. BH-3-3-3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021615.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10110.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Microbacterium sp. BH-3-3-3"
                     /db_xref="taxon:1906742"
     Protein         1..464
                     /product="glycerophosphoryl diester phosphodiesterase
                     membrane domain-containing protein"
                     /calculated_mol_wt=47127
     Region          <188..>255
                     /region_name="GPDPase_memb"
                     /note="Membrane domain of glycerophosphoryl diester
                     phosphodiesterase; pfam10110"
                     /db_xref="CDD:431062"
     Region          <337..462
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <368..415
                     /region_name="SGP"
                     /note="Sulphur globule protein; pfam17228"
                     /db_xref="CDD:435798"
ORIGIN      
        1 mqrggvtvta ypnwtpasrp givplhpygf gtilgrsfva lrhnpkvllg falvvqavay
       61 ivlaaavgai avasfsrldt vayggddwga ifagstvitg aaalvlsllv galsvvvqgv
      121 vvsevahavv aekptlkavw arvrpviwrl igysalvvla slvvvgvlag ivtllvisvl
      181 wlgilvgvlf vlgliplyaw lttklflvps viilegagir agiarswrlt rrrfwstfgv
      241 iviisfgfsv laqlisvpfs liagivpgil aptgtdeiga vvgmvvvqvi gqfgillvqc
      301 ialvvqstsa alvyvdarmr vegldhdlht yveardagat dladpylvgv grvverpapv
      361 pvgaappyag ygapagygap agygvpagyg apagygapaq ygappvpapa sdapatgsat
      421 padrsadeav sgpatppppa ppspdvappa aptswaapgs ptdr
//
LOCUS       WP_258027562              57 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase, partial [Staphylococcus aureus].
ACCESSION   WP_258027562
VERSION     WP_258027562.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 57)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..57
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>57
                     /product="PfkB family carbohydrate kinase"
     Region          1..>57
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
ORIGIN      
        1 miltltlnps vdisypltal klddvnrvqe vsktaggkgl nvtrvlaqvg epvlasg
//
LOCUS       WP_258027566             126 aa            linear   BCT 02-MAR-2025
DEFINITION  amino acid permease, partial [Staphylococcus aureus].
ACCESSION   WP_258027566
VERSION     WP_258027566.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..126
                     /product="amino acid permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <3..126
                     /region_name="PotE"
                     /note="Serine transporter YbeC, amino acid:H+ symporter
                     family [Amino acid transport and metabolism]; COG0531"
                     /db_xref="CDD:440297"
ORIGIN      
        1 lpfshlfakl tksgapwfga iiqlliaivm msmgafdtit nmlifviwlf ycmsfvavii
       61 lrkrepnmer pykvplypii pliailagsf vlintlftqf ilaiigilit algipvyyyk
      121 kkqkaa
//
LOCUS       WP_258027644             452 aa            linear   BCT 02-MAR-2025
DEFINITION  PIG-L family deacetylase [Curtobacterium sp. BH-2-1-1].
ACCESSION   WP_258027644
VERSION     WP_258027644.1
KEYWORDS    RefSeq.
SOURCE      Curtobacterium sp. BH-2-1-1
  ORGANISM  Curtobacterium sp. BH-2-1-1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Curtobacterium.
REFERENCE   1  (residues 1 to 452)
  AUTHORS   Handa,N., Terada,T., Kamewari,Y., Hamana,H., Tame,J.R., Park,S.Y.,
            Kinoshita,K., Ota,M., Nakamura,H., Kuramitsu,S., Shirouzu,M. and
            Yokoyama,S.
  TITLE     Crystal structure of the conserved protein TT1542 from Thermus
            thermophilus HB8
  JOURNAL   Protein Sci 12 (8), 1621-1632 (2003)
   PUBMED   12876312
REFERENCE   2  (residues 1 to 452)
  AUTHORS   Watanabe,R., Ohishi,K., Maeda,Y., Nakamura,N. and Kinoshita,T.
  TITLE     Mammalian PIG-L and its yeast homologue Gpi12p are
            N-acetylglucosaminylphosphatidylinositol de-N-acetylases essential
            in glycosylphosphatidylinositol biosynthesis
  JOURNAL   Biochem J 339 (Pt 1) (Pt 1), 185-192 (1999)
   PUBMED   10085243
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014625.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02585.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Curtobacterium sp. BH-2-1-1"
                     /db_xref="taxon:1905847"
     Protein         1..452
                     /product="PIG-L family deacetylase"
                     /calculated_mol_wt=48423
     Region          40..247
                     /region_name="LmbE"
                     /note="N-acetylglucosaminyl deacetylase, LmbE family
                     [Carbohydrate transport and metabolism]; COG2120"
                     /db_xref="CDD:441723"
     Region          264..401
                     /region_name="COG4976"
                     /note="Predicted methyltransferase, contains TPR repeat
                     [General function prediction only]"
                     /db_xref="CDD:444001"
ORIGIN      
        1 msfdhrepgt dpadwtpflr svpslpvrld gvaavvvvap hpddetlgag gliasaadag
       61 vpvhvllvtc gegshpdsps tspdrlrair daefraalaa lapaasatvl dvpdgglreh
      121 pdvlraalte rvgpvdgpvl vvapwrgdgh rdhriageva advvagtpga elleypiwaw
      181 hwddpsdpaa pwdrarslal ssavldrkra aldaypsqtr plspapgdea ivdarhaahh
      241 lrptewffav savqssrsre sfdahyerkp egwdfegswy errkravtla alpreryrsa
      301 lelgcatgvl taalterada vlgtdiaaap lerarlrapa arfvqaelps ewpdgrwdlv
      361 vvsevgyyls padldatidr algsldddgv lvachwrhpd ddavtsgdav dariaerwpr
      421 palvrhveed fvlsvfpgps vvsvattegl tp
//
LOCUS       WP_258027663             261 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding oxidoreductase [Curtobacterium sp. BH-2-1-1].
ACCESSION   WP_258027663
VERSION     WP_258027663.1
KEYWORDS    RefSeq.
SOURCE      Curtobacterium sp. BH-2-1-1
  ORGANISM  Curtobacterium sp. BH-2-1-1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Curtobacterium.
REFERENCE   1  (residues 1 to 261)
  AUTHORS   Lu,G., Campbell,W.H., Schneider,G. and Lindqvist,Y.
  TITLE     Crystal structure of the FAD-containing fragment of corn nitrate
            reductase at 2.5 A resolution: relationship to other flavoprotein
            reductases
  JOURNAL   Structure 2 (9), 809-821 (1994)
   PUBMED   7812715
REFERENCE   2  (residues 1 to 261)
  AUTHORS   Hyde,G.E., Crawford,N.M. and Campbell,W.H.
  TITLE     The sequence of squash NADH:nitrate reductase and its relationship
            to the sequences of other flavoprotein oxidoreductases. A family of
            flavoprotein pyridine nucleotide cytochrome reductases
  JOURNAL   J Biol Chem 266 (35), 23542-23547 (1991)
   PUBMED   1748631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013161.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00970.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Curtobacterium sp. BH-2-1-1"
                     /db_xref="taxon:1905847"
     Protein         1..261
                     /product="FAD-binding oxidoreductase"
                     /calculated_mol_wt=27086
     Region          25..257
                     /region_name="FNR_like"
                     /note="Ferredoxin reductase (FNR), an FAD and NAD(P)
                     binding protein, was intially identified as a chloroplast
                     reductase activity, catalyzing the electron transfer from
                     reduced iron-sulfur protein ferredoxin to NADP+ as the
                     final step in the electron transport...; cl06868"
                     /db_xref="CDD:447143"
     Site            order(58,73..76,89..91,96..99,140)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99813"
     Site            order(73,75..76)
                     /site_type="other"
                     /note="conserved FAD binding motif [chemical binding]"
                     /db_xref="CDD:99813"
     Site            order(96,99,102,109)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99813"
     Site            order(135,139..142,144)
                     /site_type="other"
                     /note="beta-alpha-beta structure motif"
                     /db_xref="CDD:99813"
     Site            order(140..141,166..168,230..231)
                     /site_type="other"
                     /note="NAD binding pocket [chemical binding]"
                     /db_xref="CDD:99813"
ORIGIN      
        1 msavegleer itpptsaavr rrpawhaatv aavspetpna rrivldvptw pgndpgqhld
       61 lrltaedgyq asrsysiass gattsvvlav drveggevsp flvdavevgd alevhgplgg
      121 wfvwrpgvse rpvqliaggs givplaavag ahadagdaap frllyavrtp edvffrtela
      181 raeaagvdtt vvysrrapdg aavsagrltr dalaaavfpp dagalvyvcg stpfveqvlt
      241 wlgelghdtt dvraerfggs a
//
LOCUS       WP_258027720             202 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Curtobacterium sp.
            BH-2-1-1].
ACCESSION   WP_258027720
VERSION     WP_258027720.1
KEYWORDS    RefSeq.
SOURCE      Curtobacterium sp. BH-2-1-1
  ORGANISM  Curtobacterium sp. BH-2-1-1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Curtobacterium.
REFERENCE   1  (residues 1 to 202)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 202)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Curtobacterium sp. BH-2-1-1"
                     /db_xref="taxon:1905847"
     Protein         1..202
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=20550
     Region          1..>202
                     /region_name="PRK06196"
                     /note="oxidoreductase; Provisional"
                     /db_xref="CDD:235736"
ORIGIN      
        1 mpdrdlaafg ahttaaevva gldlrgrtav vtgaasgigv etaralagag atvtlavrdv
       61 gagqrvaadi arttgrtapd vaelhldrpa sveafaasws gpldvlvana gvmdspesyt
      121 sagwetqfat nhlghfalal glhealaaas garivslsss ghgsspvvfe dlffrrrpye
      181 pglayaqskt anvlfavevg rr
//
LOCUS       WP_258027823             114 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Microbacterium testaceum].
ACCESSION   WP_258027823
VERSION     WP_258027823.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium testaceum
  ORGANISM  Microbacterium testaceum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Microbacterium testaceum"
                     /db_xref="taxon:2033"
     Protein         1..114
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=12953
     Region          2..>81
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(3..5,19,37..39)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133389"
ORIGIN      
        1 mlsigafaqi gqvthrmlrh wdtagllvpa hvdehsgyrs ydpsqlerlh rivalrqlgf
       61 glddvasiln qgvgadriav llrerrveve rehrrrehst ppsrntrfar taqr
//
LOCUS       WP_258027932             130 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6328 family protein [Microbacterium testaceum].
ACCESSION   WP_258027932
VERSION     WP_258027932.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium testaceum
  ORGANISM  Microbacterium testaceum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 130)
  AUTHORS   Ramos,A., Lombo,F., Brana,A.F., Rohr,J., Mendez,C. and Salas,J.A.
  TITLE     Biosynthesis of elloramycin in Streptomyces olivaceus requires
            glycosylation by enzymes encoded outside the aglycon cluster
  JOURNAL   Microbiology (Reading) 154 (Pt 3), 781-788 (2008)
   PUBMED   18310024
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039409.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19853.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Microbacterium testaceum"
                     /db_xref="taxon:2033"
     Protein         1..130
                     /product="DUF6328 family protein"
                     /calculated_mol_wt=13708
     Region          2..>71
                     /region_name="DUF6328"
                     /note="Family of unknown function (DUF6328); pfam19853"
                     /db_xref="CDD:466208"
ORIGIN      
        1 mlqtgaqilt gllldlafpa sfaelgtpqr vlylglagla alravvaiar valhravfhl
       61 rdeptlvrva hdalrgalal vslllvgava fvfdvvvglv asgvvlgvvi lvlwtvvpri
      121 vrhrrrgrar
//
LOCUS       WP_258027953             294 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Microbacterium testaceum].
ACCESSION   WP_258027953
VERSION     WP_258027953.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium testaceum
  ORGANISM  Microbacterium testaceum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Microbacterium testaceum"
                     /db_xref="taxon:2033"
     Protein         1..294
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=32059
     Region          2..292
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mlawdflrvp lsaarggerv ivhatntggr fpsqrsivvm hdtmvldhrr lfakvfvaya
       61 ratfdvsarl aevivtpsah saaqiakrwp radirvipwp appvreaprs lehregflmv
      121 asgdrhkrvp laievvaelr rdlgqefplt lvlrpgndse aidaavrrwd pagswvrthq
      181 dvssaaldhl ydtslaliva svdegyclpa veasaaglpv ahtgrgslne vaaltvapse
      241 tlsqdasvll tqlkelvinr eswqasardg ltlaasrsas rfrtswndli qefs
//
LOCUS       WP_258028023             314 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase, partial [Staphylococcus
            aureus].
ACCESSION   WP_258028023
VERSION     WP_258028023.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 314)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>314
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
     Region          3..314
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mineqrllnt flelvqidse tgnestiqpi lkekfialgl dvkedeaakh pklgannlvc
       61 tmnstieege vpklyltshm dtvvpainvk aivkedgyiy sdgttilgad dkaglaamle
      121 vlqvikeqqi phgqiqfvit vgeesgliga kelnsellda dfgyaidasa dvgttvvgap
      181 tqmlisakii gktahastpk egvsainiaa kaisrmklgq vdeittanig kfhggsatni
      241 vadevileae arshdperik tqvkhmtdvf ettaselggk aevtveqsyp gfkindneav
      301 vkiaqesarn lgls
//
LOCUS       WP_258028009             128 aa            linear   BCT 02-MAR-2025
DEFINITION  ribonucleotide-diphosphate reductase subunit beta, partial
            [Staphylococcus aureus].
ACCESSION   WP_258028009
VERSION     WP_258028009.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 128)
  AUTHORS   Nordlund,P. and Eklund,H.
  TITLE     Structure and function of the Escherichia coli ribonucleotide
            reductase protein R2
  JOURNAL   J Mol Biol 232 (1), 123-164 (1993)
   PUBMED   8331655
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012490.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00268.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..128
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /GO_process="GO:0009263 - deoxyribonucleotide biosynthetic
                     process [Evidence IEA]"
     Region          <1..125
                     /region_name="Ferritin_like"
                     /note="Ferritin-like superfamily of diiron-containing
                     four-helix-bundle proteins; cl00264"
                     /db_xref="CDD:469698"
ORIGIN      
        1 sihgvftgld aqhlrnelse sekqkadqem ykllndlyln eesytkmlyd dlgitedvln
       61 yvkyngnkal snlgfepyfe erefnpiien aldtttknhd ffsvkgdgyv lalnvealqd
      121 ddfvfdnk
//
LOCUS       WP_258028049             240 aa            linear   BCT 02-MAR-2025
DEFINITION  conjugal transfer protein, partial [Staphylococcus aureus].
ACCESSION   WP_258028049
VERSION     WP_258028049.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 240)
  AUTHORS   Bannam,T.L., Teng,W.L., Bulach,D., Lyras,D. and Rood,J.I.
  TITLE     Functional identification of conjugation and replication regions of
            the tetracycline resistance plasmid pCW3 from Clostridium
            perfringens
  JOURNAL   J Bacteriol 188 (13), 4942-4951 (2006)
   PUBMED   16788202
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024056.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12642.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..240
                     /product="conjugal transfer protein"
     Region          <1..122
                     /region_name="TcpC_N"
                     /note="N-terminal domain of conjugative transposon protein
                     TcpC; cd16386"
                     /db_xref="CDD:319860"
     Site            order(13..15,19,25,28,30,35..36,42..46,48,52..54,58,60,
                     95..98,100,102..104,109..111,113..121)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:319860"
     Region          142..233
                     /region_name="TcpC_C"
                     /note="C-terminal domain of conjugative transposon protein
                     TcpC; cd16428"
                     /db_xref="CDD:319759"
     Site            order(158,174..176,180..181,210,212..218)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:319759"
ORIGIN      
        1 dskelesrek ellkyfpsdy kkpdekisdt erklnskefy nikrkdkqti iqyivnydvn
       61 itekkevkvk kkkksekdkd eyetkteekq rkvnqnilin ipiksennky vvveypyftp
      121 ipdsqlnkak mvednlkdnk rednpkakaf iedffnkyas sksddmaylm dnpeglegtr
      181 evsqireirl ypkgddyvak veilmkdkds plenlehytl ditkkdgkyy vknmtnsigg
//
LOCUS       WP_258028037              89 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleotidyltransferase family protein, partial [Staphylococcus
            aureus].
ACCESSION   WP_258028037
VERSION     WP_258028037.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017452.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05636.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>89
                     /product="nucleotidyltransferase family protein"
     Region          1..>89
                     /region_name="HIGH_NTase1"
                     /note="HIGH Nucleotidyl Transferase; cl27012"
                     /db_xref="CDD:474883"
ORIGIN      
        1 mksvglitey npfhnghqyh inqskkltna dvtiaimsgn fvmrgepaiy nkftrakmal
       61 stadlvielp ataslssgdh faelavkva
//
LOCUS       WP_258028034              34 aa            linear   BCT 02-MAR-2025
DEFINITION  S-adenosylmethionine:tRNA ribosyltransferase-isomerase, partial
            [Staphylococcus aureus].
ACCESSION   WP_258028034
VERSION     WP_258028034.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 34)
  AUTHORS   Liu,Y., Dong,Y., Chen,Y.Y. and Burne,R.A.
  TITLE     Environmental and growth phase regulation of the Streptococcus
            gordonii arginine deiminase genes
  JOURNAL   Appl Environ Microbiol 74 (16), 5023-5030 (2008)
   PUBMED   18552185
REFERENCE   2  (residues 1 to 34)
  AUTHORS   Van Lanen,S.G. and Iwata-Reuyl,D.
  TITLE     Kinetic mechanism of the tRNA-modifying enzyme
            S-adenosylmethionine:tRNA ribosyltransferase-isomerase (QueA)
  JOURNAL   Biochemistry 42 (18), 5312-5320 (2003)
   PUBMED   12731872
REFERENCE   3  (residues 1 to 34)
  AUTHORS   Slany,R.K., Bosl,M., Crain,P.F. and Kersten,H.
  TITLE     A new function of S-adenosylmethionine: the ribosyl moiety of
            AdoMet is the precursor of the cyclopentenediol moiety of the tRNA
            wobble base queuine
  JOURNAL   Biochemistry 32 (30), 7811-7817 (1993)
   PUBMED   8347586
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02547.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..34
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..34
                     /product="S-adenosylmethionine:tRNA
                     ribosyltransferase-isomerase"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /GO_function="GO:0016853 - isomerase activity [Evidence
                     IEA]"
     Region          <1..34
                     /region_name="queA"
                     /note="S-adenosylmethionine:tRNA
                     ribosyltransferase-isomerase; Provisional; cl00523"
                     /db_xref="CDD:469804"
ORIGIN      
        1 vsafstrenv lnayktavnl eyrffsfgda mlii
//
LOCUS       WP_258027999             728 aa            linear   BCT 02-MAR-2025
DEFINITION  fibrinogen-binding adhesin SdrG C-terminal domain-containing
            protein, partial [Staphylococcus aureus].
ACCESSION   WP_258027999
VERSION     WP_258027999.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 728)
  AUTHORS   Ponnuraj,K., Bowden,M.G., Davis,S., Gurusiddappa,S., Moore,D.,
            Choe,D., Xu,Y., Hook,M. and Narayana,S.V.
  TITLE     A 'dock, lock, and latch' structural model for a staphylococcal
            adhesin binding to fibrinogen
  JOURNAL   Cell 115 (2), 217-228 (2003)
   PUBMED   14567919
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021909.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10425.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>728
                     /product="fibrinogen-binding adhesin SdrG C-terminal
                     domain-containing protein"
                     /GO_process="GO:0007155 - cell adhesion [Evidence IEA]"
     Region          1..>428
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
ORIGIN      
        1 mknnlrygir khklgaasvf lgtmivvgmg qdkeaaaseq ktttveengn satdnkvset
       61 qtttanvnti eetqsynatv teqpsnatqv tteeapkavq apqtaqpanl etvkeevvke
      121 eakpqvettq pqdnsgnqrq vdltpkkatq nqvtethvev aqprkasesk prvtrsadvv
      181 eakdakvdtg tdvtskvtvt essieghnnt nkvephagqr avlkyklkfe dglkkgdyfd
      241 ftlsnnvnty gvstarklpe ikngsvvmat gqllgdgkir ytftdyidyk vnvtanlnln
      301 lfidprivkn ngeetltski ngkntekkie veykdgvgky ytnlngsiet fnkadnkfth
      361 vayvkpingn ksesvsitgs ltqgsnvsgd spivkvyeyq gketdlpksv svnltdnskf
      421 kdvtsdmqnk ltvqengnyq lnlekldkty vihytgeysk etdevnfrtq vsaypensyr
      481 yysyynnhyt ltwdnglvly snkadgngqn gvkvesnnli fdeitgtgvi kgqydknlvt
      541 tveeeydsst ldidyhtaid geggyvdgyi etieetdssa ididyhtavd seaghvggyt
      601 esseesnpid feesthensk hhadvveyee dtnpgggqvt tesnlvefde estkgivtga
      661 vsdhttvedt keyttesnli elvdelpeeh gqaqgpieei tennhhishs glgtenghgn
      721 ygvieeie
//
LOCUS       WP_258028007             355 aa            linear   BCT 02-MAR-2025
DEFINITION  coagulase domain-containing protein, partial [Staphylococcus
            aureus].
ACCESSION   WP_258028007
VERSION     WP_258028007.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 355)
  AUTHORS   Friedrich,R., Panizzi,P., Fuentes-Prior,P., Richter,K.,
            Verhamme,I., Anderson,P.J., Kawabata,S., Huber,R., Bode,W. and
            Bock,P.E.
  TITLE     Staphylocoagulase is a prototype for the mechanism of
            cofactor-induced zymogen activation
  JOURNAL   Nature 425 (6957), 535-539 (2003)
   PUBMED   14523451
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020344.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08764.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..355
                     /product="coagulase domain-containing protein"
     Region          <1..355
                     /region_name="Coagulase"
                     /note="Staphylococcus aureus coagulase; cl09462"
                     /db_xref="CDD:471886"
ORIGIN      
        1 qdiesrnpdl ktfdrdkdya vraklnelen kvlmlghafp nkhearenly nkldlivgrs
       61 ddereerhpq ndrlskerve dlesiideff veinenrpln ipaliesnee nivmakklka
      121 dteeakants krskrslntq nhkskinevt eeqkanyekk fkeikerfla kqknknntpv
      181 vsleydeddn endkklvvse pskkpttppt ytetttqvpm ptverqtqqq iiynapkqla
      241 glngeshdft tthqspttsn hthnhliefe etsalpgrks gslvgisqid sshlterekr
      301 vikrehvrea qklvdnykdt hsykdrlnaq qkvntlsegh qkrfnkqink vyngk
//
LOCUS       WP_258028075             198 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Mammaliicoccus sciuri].
ACCESSION   WP_258028075
VERSION     WP_258028075.1
KEYWORDS    RefSeq.
SOURCE      Mammaliicoccus sciuri
  ORGANISM  Mammaliicoccus sciuri
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Mammaliicoccus.
REFERENCE   1  (residues 1 to 198)
  AUTHORS   Kreikemeyer,B., Beckert,S., Braun-Kiewnick,A. and Podbielski,A.
  TITLE     Group A streptococcal RofA-type global regulators exhibit a
            strain-specific genomic presence and regulation pattern
  JOURNAL   Microbiology (Reading) 148 (Pt 5), 1501-1511 (2002)
   PUBMED   11988525
REFERENCE   2  (residues 1 to 198)
  AUTHORS   McIver,K.S. and Myles,R.L.
  TITLE     Two DNA-binding domains of Mga are required for virulence gene
            activation in the group A streptococcus
  JOURNAL   Mol Microbiol 43 (6), 1591-1601 (2002)
   PUBMED   11952907
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016901.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05043.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Mammaliicoccus sciuri"
                     /db_xref="taxon:1296"
     Protein         1..198
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=23135
     Region          8..>178
                     /region_name="BglG"
                     /note="Transcriptional antiterminator [Transcription];
                     COG3711"
                     /db_xref="CDD:442925"
ORIGIN      
        1 metrhlnivk ilyqhqheym nsisiakllg cssktireni kvinetsken gfvifikksk
       61 gyqlnitdeg kfnyflnerf lkdenlnfnn qdsrirfimk kllldnhytk leslseslfv
      121 svgtlkndmi emkrvlarye ievvsrpnyg mkligkefqi ryaiaeflln nqhlnigfte
      181 ddissvksyl vklnliil
//
LOCUS       WP_258028186             202 aa            linear   BCT 02-MAR-2025
DEFINITION  SLC13 family permease, partial [Staphylococcus aureus].
ACCESSION   WP_258028186
VERSION     WP_258028186.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015557.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03600.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>202
                     /product="SLC13 family permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          63..>185
                     /region_name="ArsB_NhaD_permease"
                     /note="Anion permease ArsB/NhaD. These permeases have been
                     shown to translocate sodium, arsenate, antimonite, sulfate
                     and organic anions across biological membranes in all
                     three kingdoms of life. A typical anion permease contains
                     8-13 transmembrane helices...; cl21473"
                     /db_xref="CDD:473875"
ORIGIN      
        1 mayfnqhqsm iskryltffs kskkkkpfsa gqliglilgp llflltllff hpqdlpwkgv
       61 yvlaitlwia twwiteaipi aatsllpivl lplghiltpe qvsseygndi iflflggfil
      121 aiamerwnlh trvaltiinl igastskill gfmvatgfls mfvsntaavm imipiglaii
      181 keahdlqean tnqtsiqkfe ks
//
LOCUS       WP_258028135              73 aa            linear   BCT 02-MAR-2025
DEFINITION  putative HNHc nuclease, partial [Staphylococcus aureus].
ACCESSION   WP_258028135
VERSION     WP_258028135.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028094.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16784.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..>73
                     /product="putative HNHc nuclease"
     Region          <1..>73
                     /region_name="HNHc_6"
                     /note="Putative HNHc nuclease; pfam16784"
                     /db_xref="CDD:293389"
ORIGIN      
        1 qteleimkgy eeislrdcsm kvarelieli iafmfhhqip msvetsklls edkallywat
       61 inrncvicgk pha
//
LOCUS       WP_258028226            1135 aa            linear   BCT 02-MAR-2025
DEFINITION  SdrD B-like domain-containing protein, partial [Staphylococcus
            aureus].
ACCESSION   WP_258028226
VERSION     WP_258028226.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028519.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17210.9
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..1135
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..1135
                     /product="SdrD B-like domain-containing protein"
     Region          1..1135
                     /region_name="MSCRAMM_SdrD"
                     /note="MSCRAMM family adhesin SdrD; NF012181"
                     /db_xref="CDD:467951"
ORIGIN      
        1 irkytvgtas ilvgttlifg lgnqeakaae ntstenakqd dattsdnkev vsetennstt
       61 endstnpikk etntdsqpea keesttsstq qqqnnvtatt etkpqnieke nvkpstdkta
      121 tedtsvilee kkapnytnnd vttkpstsei qtkpttpqes tniensqpqp tpskvdnqvt
      181 datnpkepvn vskeelknnp eklkelvrnd nntdrstkpv ataptsvapk rlnakmrfav
      241 aqpaavasnn vndlitvtkq tikvgdgkdn vaaahdgkdi eydteftidn kvkkgdtmti
      301 nydknvipsd ltdkndpidi tdpsgeviak gtfdkatkqi tytftdyvdk yedikarltl
      361 ysyidkqavp netslnltfa tagketsqnv svdyqdpmvh gdsniqsift kldenkqtie
      421 qqiyvnplkk tatntkvdia gsqvddygni klgngstiid qnteikvykv npnqqlpqsn
      481 riydfsqyed vtsqfdnkks fsnnvatldf gdinsayiik viskytptsd geldiaqgts
      541 mrttdkygyy nyagysnfiv tsndtgggdg tvkpeeklyk igdyvwedvd kdgvqgtdsk
      601 ekpmanvlvt ltypdgttks vrtdanghye fgglkdgety tvkfetpagy lptkvngttd
      661 gekdsngssv tvkingkddm sldtgfykep kynlgdyvwe dtnkdgiqda nepgikdvkv
      721 tlkdstgkvi gttttdasgk ykftdldngn ytvefetpag ytptvkntta edkdsngltt
      781 tgvikdadnm tldsgfyktp kyslgdyvwy dsnkdgkqds tekgikdvkv tllnekgevi
      841 gttktdengk yrfdnldsgk ykvifekpag ltqtvtntte ddkdadggev dvtitdhddf
      901 tldngyfeed tsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds
      961 dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds
     1021 dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdsdsds dsdsdagkht
     1081 pvkpmsttkd hhnkakalpe tgsenngsnn atlfgglfaa lgslllfgrr kkqnk
//
LOCUS       WP_258028242              82 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1672 family protein, partial [Staphylococcus aureus].
ACCESSION   WP_258028242
VERSION     WP_258028242.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019516.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07901.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>82
                     /product="DUF1672 family protein"
     Region          4..>48
                     /region_name="mltD"
                     /note="membrane-bound lytic murein transglycosylase D;
                     Provisional; PRK10783"
                     /db_xref="CDD:182727"
     Region          38..>82
                     /region_name="DUF1672"
                     /note="Protein of unknown function (DUF1672); pfam07901"
                     /db_xref="CDD:285184"
ORIGIN      
        1 mlkkaklilm atillsgcsa menesskdtn tetksvpeem easkyegqgf qppaekdaie
       61 fakkhkdkia krgeqffmdn fg
//
LOCUS       WP_258028246             165 aa            linear   BCT 02-MAR-2025
DEFINITION  GntR family transcriptional regulator, partial [Staphylococcus
            aureus].
ACCESSION   WP_258028246
VERSION     WP_258028246.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 165)
  AUTHORS   Hillerich,B. and Westpheling,J.
  TITLE     A new GntR family transcriptional regulator in streptomyces
            coelicolor is required for morphogenesis and antibiotic production
            and controls transcription of an ABC transporter in response to
            carbon source
  JOURNAL   J Bacteriol 188 (21), 7477-7487 (2006)
   PUBMED   16936034
REFERENCE   2  (residues 1 to 165)
  AUTHORS   Rigali,S., Nothaft,H., Noens,E.E., Schlicht,M., Colson,S.,
            Muller,M., Joris,B., Koerten,H.K., Hopwood,D.A., Titgemeyer,F. and
            van Wezel,G.P.
  TITLE     The sugar phosphotransferase system of Streptomyces coelicolor is
            regulated by the GntR-family regulator DasR and links
            N-acetylglucosamine metabolism to the control of development
  JOURNAL   Mol Microbiol 61 (5), 1237-1251 (2006)
   PUBMED   16925557
REFERENCE   3  (residues 1 to 165)
  AUTHORS   Gorelik,M., Lunin,V.V., Skarina,T. and Savchenko,A.
  TITLE     Structural characterization of GntR/HutC family signaling domain
  JOURNAL   Protein Sci 15 (6), 1506-1511 (2006)
   PUBMED   16672238
REFERENCE   4  (residues 1 to 165)
  AUTHORS   Rigali,S., Schlicht,M., Hoskisson,P., Nothaft,H., Merzbacher,M.,
            Joris,B. and Titgemeyer,F.
  TITLE     Extending the classification of bacterial transcription factors
            beyond the helix-turn-helix motif as an alternative approach to
            discover new cis/trans relationships
  JOURNAL   Nucleic Acids Res 32 (11), 3418-3426 (2004)
   PUBMED   15247334
  REMARK    Publication Status: Online-Only
REFERENCE   5  (residues 1 to 165)
  AUTHORS   Lee,M.H., Scherer,M., Rigali,S. and Golden,J.W.
  TITLE     PlmA, a new member of the GntR family, has plasmid maintenance
            functions in Anabaena sp. strain PCC 7120
  JOURNAL   J Bacteriol 185 (15), 4315-4325 (2003)
   PUBMED   12867439
REFERENCE   6  (residues 1 to 165)
  AUTHORS   Rigali,S., Derouaux,A., Giannotta,F. and Dusart,J.
  TITLE     Subdivision of the helix-turn-helix GntR family of bacterial
            regulators in the FadR, HutC, MocR, and YtrA subfamilies
  JOURNAL   J Biol Chem 277 (15), 12507-12515 (2002)
   PUBMED   11756427
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012610.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00392.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>165
                     /product="GntR family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
     Region          4..>165
                     /region_name="ARO8"
                     /note="DNA-binding transcriptional regulator, MocR family,
                     contains an aminotransferase domain [Transcription, Amino
                     acid transport and metabolism]; COG1167"
                     /db_xref="CDD:440781"
ORIGIN      
        1 mkntlyhqly eklkkqiieg qfkegdkfys krqlskhlsi sqttvehayq llldegyiys
       61 rprsgyfvse iesltilnnq pipslfddds ykpkasdeay dyafnldeid tkhfpielfr
      121 kyskdlydtn hlnqlrrghf qgelhlrfql afylftnrgv icdpn
//
LOCUS       WP_258028358             105 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Staphylococcus aureus].
ACCESSION   WP_258028358
VERSION     WP_258028358.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13751.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..105
                     /product="transposase"
     Region          <1..77
                     /region_name="transpos_IS1182"
                     /note="IS1182 family transposase; NF033551"
                     /db_xref="CDD:468080"
ORIGIN      
        1 kimknynwey fkvqinqkls epetkniysq rkidvepafg fmkailgftr msvrginkvk
       61 relgfvlmal nirkiaaqra vhykihikka dfyqiinrnq lfyia
//
LOCUS       WP_258028366             167 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Staphylococcus aureus].
ACCESSION   WP_258028366
VERSION     WP_258028366.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13751.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..167
                     /product="transposase"
     Region          <1..139
                     /region_name="transpos_IS1182"
                     /note="IS1182 family transposase; NF033551"
                     /db_xref="CDD:468080"
ORIGIN      
        1 wkydefndef icpnnkrigf kryayrndry gfkrdfklye rddcsacslr hqcmkpnlks
       61 nkkimknynw eyfkaqinqk lskpetkkiy sqrkidvepv fgfmkailgf trmsvrgink
      121 vkrelgfvlm alnireiaaq ravhykihik kadfyqiinr nqlfyia
//
LOCUS       WP_258028428              87 aa            linear   BCT 02-MAR-2025
DEFINITION  Mu transposase domain-containing protein [Staphylococcus aureus].
ACCESSION   WP_258028428
VERSION     WP_258028428.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 87)
  AUTHORS   Rice,P. and Mizuuchi,K.
  TITLE     Structure of the bacteriophage Mu transposase core: a common
            structural motif for DNA transposition and retroviral integration
  JOURNAL   Cell 82 (2), 209-220 (1995)
   PUBMED   7628012
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046294.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22483.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..87
                     /product="Mu transposase domain-containing protein"
                     /calculated_mol_wt=10020
ORIGIN      
        1 mnhleisqat eqrpidvfny eekehlnsfn aklldtyied ecirivskes minfrkgkys
       61 vptkyigeev kvifnnstge lliysts
//
LOCUS       WP_258028243              80 aa            linear   BCT 02-MAR-2025
DEFINITION  IMP dehydrogenase, partial [Staphylococcus aureus].
ACCESSION   WP_258028243
VERSION     WP_258028243.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 80)
  AUTHORS   Zhang,R., Evans,G., Rotella,F.J., Westbrook,E.M., Beno,D.,
            Huberman,E., Joachimiak,A. and Collart,F.R.
  TITLE     Characteristics and crystal structure of bacterial
            inosine-5'-monophosphate dehydrogenase
  JOURNAL   Biochemistry 38 (15), 4691-4700 (1999)
   PUBMED   10200156
REFERENCE   2  (residues 1 to 80)
  AUTHORS   Whitby,F.G., Luecke,H., Kuhn,P., Somoza,J.R., Huete-Perez,J.A.,
            Phillips,J.D., Hill,C.P., Fletterick,R.J. and Wang,C.C.
  TITLE     Crystal structure of Tritrichomonas foetus inosine-5'-monophosphate
            dehydrogenase and the enzyme-product complex
  JOURNAL   Biochemistry 36 (35), 10666-10674 (1997)
   PUBMED   9271497
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012690.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00478.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>80
                     /product="IMP dehydrogenase"
                     /EC_number="1.1.1.205"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          10..>80
                     /region_name="IMPDH"
                     /note="IMP dehydrogenase / GMP reductase domain;
                     pfam00478"
                     /db_xref="CDD:459826"
ORIGIN      
        1 mweskfakes ltfddvllip aqsdilpkdv dlsvqlsdkv klnipvisag mdtvteskma
       61 iamarqgglg vihknmgvee
//
LOCUS       WP_258028435             105 aa            linear   BCT 02-MAR-2025
DEFINITION  E domain-containing protein, partial [Staphylococcus aureus].
ACCESSION   WP_258028435
VERSION     WP_258028435.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 105)
  AUTHORS   Gruszka,D.T., Wojdyla,J.A., Bingham,R.J., Turkenburg,J.P.,
            Manfield,I.W., Steward,A., Leech,A.P., Geoghegan,J.A., Foster,T.J.,
            Clarke,J. and Potts,J.R.
  TITLE     Staphylococcal biofilm-forming protein has a contiguous rod-like
            structure
  JOURNAL   Proc Natl Acad Sci U S A 109 (17), E1011-E1018 (2012)
   PUBMED   22493247
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028351.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17041.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..>105
                     /product="E domain-containing protein"
     Region          11..58
                     /region_name="SasG_E"
                     /note="E domain; pfam17041"
                     /db_xref="CDD:407216"
     Region          <45..>103
                     /region_name="YabE"
                     /note="Uncharacterized conserved protein YabE, contains G5
                     and tandem DUF348 domains [Function unknown]; COG3583"
                     /db_xref="CDD:442802"
ORIGIN      
        1 inelteygpe titpghrdef dpklptgeke evpgkpgikn petgdvvrpp vdsvtkygpv
       61 kgdsivekee ipfekerkfn pdlapgtekv tregqkgekt ittpt
//
LOCUS       WP_258028445             128 aa            linear   BCT 02-MAR-2025
DEFINITION  amino acid permease, partial [Staphylococcus aureus].
ACCESSION   WP_258028445
VERSION     WP_258028445.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..128
                     /product="amino acid permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <33..128
                     /region_name="PotE"
                     /note="Serine transporter YbeC, amino acid:H+ symporter
                     family [Amino acid transport and metabolism]; COG0531"
                     /db_xref="CDD:440297"
ORIGIN      
        1 kllpfshlfa kltksgapwf gaiiqliiai immsmgafdt itnmlifviw lfycmsfvav
       61 iilrkrepnm erpykvplyp iipliailag sfvlintlft qfilaiigil italgipvyy
      121 ykkkqkaa
//
LOCUS       WP_258028498             678 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase, partial [Staphylococcus aureus].
ACCESSION   WP_258028498
VERSION     WP_258028498.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 678)
  AUTHORS   Levitz,R., Chapman,D., Amitsur,M., Green,R., Snyder,L. and
            Kaufmann,G.
  TITLE     The optional E. coli prr locus encodes a latent form of phage
            T4-induced anticodon nuclease
  JOURNAL   EMBO J 9 (5), 1383-1389 (1990)
   PUBMED   1691706
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024565.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13166.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..678
                     /product="AAA family ATPase"
     Region          7..661
                     /region_name="AAA_13"
                     /note="AAA domain; pfam13166"
                     /db_xref="CDD:463796"
ORIGIN      
        1 knsnssilvy nkkfveknfs qsdiglkgif tlgensinlq dnlnelrrki qvneeniyik
       61 ektirgfeee ieertniikd kiwnhqkeis kdfpeafvgy knnkqkflnq cikvyeenil
      121 ekseeiltns leklkenyni sfsddiklye vfnvndteki leiektnlie kvivggndsl
      181 igqfiqslkn sdwvkqgldy ldysnhtcpf cnqsisekle qeikdyfnee yeqdlkkike
      241 ikqvysscfe kiesnmlfil rksipylntk llskefevle kqyevnqkql keklrnpsqk
      301 lkikslvpki enineiissl nesietnnni irnkereqnk fkknlwiyiv nnmkqdlkey
      361 vnfkngkfka ianirrqisg lknenkktnk eigeietnit sveptvknin eilnkfdfkg
      421 fklqensnak gtylivredg snanetmseg eynfitflyf yylvygshes tsltsnkivi
      481 iddpisslds nvlfivstlv knlindcrnn kngiqqifnl thniyfhkei tflgsrerfs
      541 pnevmygiir kkdnisyfnt yennpiessy qlmwkelnse emspitsfnt mrrileyyfn
      601 iiggmdyekc inkfdgidki lckslisgin dgshfisddf vitfdeasmr nykrvfklvf
      661 eklghiqhfe mmsknkik
//
LOCUS       WP_258028474             582 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase family protein, partial [Staphylococcus
            aureus].
ACCESSION   WP_258028474
VERSION     WP_258028474.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04851.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>582
                     /product="DEAD/DEAH box helicase family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
     Region          38..175
                     /region_name="PLDc_N_DEXD_b2"
                     /note="N-terminal putative catalytic domain of
                     uncharacterized prokaryotic and archeal HKD family
                     nucleases fused to a DEAD/DEAH box helicase domain;
                     cd09204"
                     /db_xref="CDD:197298"
     Site            order(117..122,135,137,139,147..151,153,155)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:197298"
     Site            order(119,121,137,139,150)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197298"
     Site            119
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197298"
     Region          152..>560
                     /region_name="SSL2"
                     /note="Superfamily II DNA or RNA helicase [Transcription,
                     Replication, recombination, and repair]; COG1061"
                     /db_xref="CDD:440681"
ORIGIN      
        1 msrllndfnq slhkgfidkh ishkgnytpk llvnnknekv lstiidelqk cetfyfsvaf
       61 itesglaslk aqlldlsnkg vkgkiltsny lgfnspkmyg ellklknvev rltdiagfha
      121 kgyifehkdy ssmvigssnl tsnalkvnye hnvllstmkn gdlvdsvkse fdllwqkstp
      181 lteqwinsyk esfeyrslek laeveqtqml ladkvkksve ivpnlmqaea lrslkairdk
      241 akdkaliisa tgtgktilca ldvrevnpnk flfivhnegi lnrakeefkk vlpikndsdf
      301 glltgkhrdv dakylfatiq tlsrddnfkq fdenefdyiv fdeahrsaas tyqrvfnyfk
      361 pkfmlgmtat persdelsif elfdyniaye irlqaalesd ilcpfhyfgv tdyvhqgike
      421 ddvtklrylt sdervnyiiq ktdyygysge ilqglifvss kkeaydladk lsskgiksva
      481 ltgddsvnyr qivieklkeg kinyiitvdl fnegidipev nqvvmlrpte ssiifiqqlg
      541 rglrkssnke yvtvidfign yktnylipia lsgdqsqnkd ny
//
LOCUS       WP_258028505             140 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein, partial [Staphylococcus
            aureus].
ACCESSION   WP_258028505
VERSION     WP_258028505.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025846.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14493.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..140
                     /product="helix-turn-helix domain-containing protein"
     Region          <1..137
                     /region_name="YpbB"
                     /note="Uncharacterized conserved protein YpbB, contains
                     C-terminal HTH domain [Function unknown]; COG4955"
                     /db_xref="CDD:443982"
ORIGIN      
        1 klsqqqlfey emnnlvtmmf elesgeytil skiimkptll nqtyitytkl leqftmedia
       61 aqqqvkinti edhvleilik gymsnyddyv eledqlqfln fyqqhrgerl kfykeqfdtl
      121 syfqlkvliv gfergdlnva
//
LOCUS       WP_258028539             204 aa            linear   BCT 02-MAR-2025
DEFINITION  aromatic acid exporter family protein, partial [Staphylococcus
            aureus].
ACCESSION   WP_258028539
VERSION     WP_258028539.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017856.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06081.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>204
                     /product="aromatic acid exporter family protein"
     Region          7..147
                     /region_name="FUSC_2"
                     /note="Fusaric acid resistance protein-like; cl19401"
                     /db_xref="CDD:450298"
     Region          153..>204
                     /region_name="ArAE_1_C"
                     /note="Putative aromatic acid exporter C-terminal domain;
                     pfam11728"
                     /db_xref="CDD:432028"
ORIGIN      
        1 mlklnpykig frtiktavgm tlgviiskll gldnyassai lvvlcikhtk vhslqaiisr
       61 lvscflvlfl gsaifsllgq spivlgiivl lfipltvvlk vqegvitscv illhvfnaks
      121 idahlivnet lllliglsia ftmnlmmpsl dkqldeykck ieqqiadifs kysyicekye
      181 dtiaiefevl llnikkaksi afrd
//
LOCUS       WP_258028525              56 aa            linear   BCT 02-MAR-2025
DEFINITION  thymidylate synthase, partial [Staphylococcus aureus].
ACCESSION   WP_258028525
VERSION     WP_258028525.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 56)
  AUTHORS   Leduc,D., Escartin,F., Nijhout,H.F., Reed,M.C., Liebl,U.,
            Skouloubris,S. and Myllykallio,H.
  TITLE     Flavin-dependent thymidylate synthase ThyX activity: implications
            for the folate cycle in bacteria
  JOURNAL   J Bacteriol 189 (23), 8537-8545 (2007)
   PUBMED   17890305
REFERENCE   2  (residues 1 to 56)
  AUTHORS   Leduc,D., Graziani,S., Meslet-Cladiere,L., Sodolescu,A., Liebl,U.
            and Myllykallio,H.
  TITLE     Two distinct pathways for thymidylate (dTMP) synthesis in
            (hyper)thermophilic Bacteria and Archaea
  JOURNAL   Biochem Soc Trans 32 (Pt 2), 231-235 (2004)
   PUBMED   15046578
REFERENCE   3  (residues 1 to 56)
  AUTHORS   Myllykallio,H., Lipowski,G., Leduc,D., Filee,J., Forterre,P. and
            Liebl,U.
  TITLE     An alternative flavin-dependent mechanism for thymidylate synthesis
  JOURNAL   Science 297 (5578), 105-107 (2002)
   PUBMED   12029065
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012524.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00303.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..56
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>56
                     /product="thymidylate synthase"
     Region          8..>56
                     /region_name="TS_Pyrimidine_HMase"
                     /note="Thymidylate synthase and pyrimidine
                     hydroxymethylase: Thymidylate synthase (TS) and
                     deoxycytidylate hydroxymethylase (dCMP-HMase) are homologs
                     that catalyze analogous alkylation of C5 of pyrimidine
                     nucleotides. Both enzymes are involved in the...; cl19097"
                     /db_xref="CDD:473135"
ORIGIN      
        1 mlnsfdaayh slceevleig ntrndrtntg tiskfghqlr fdlskgfpll ttkkvs
//
LOCUS       WP_258028611            3212 aa            linear   BCT 02-MAR-2025
DEFINITION  hemagglutinin repeat-containing protein [Pseudomonas protegens].
ACCESSION   WP_258028611
VERSION     WP_258028611.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas protegens
  ORGANISM  Pseudomonas protegens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024728.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13332.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3212
                     /organism="Pseudomonas protegens"
                     /db_xref="taxon:380021"
     Protein         1..3212
                     /product="hemagglutinin repeat-containing protein"
                     /calculated_mol_wt=332637
     Region          29..1571
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          34..296
                     /region_name="TPS"
                     /note="TPS secretion domain; pfam05860"
                     /db_xref="CDD:461762"
     Region          385..404
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          406..445
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          447..467
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          509..529
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          531..549
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          551..568
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          570..591
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          593..610
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          613..631
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          633..650
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          652..670
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          672..689
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          695..712
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          714..733
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          735..752
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          755..772
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          774..801
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          803..821
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          823..840
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          866..886
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          888..905
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          907..926
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          928..949
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          951..967
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          996..1014
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1016..1035
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1037..1055
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1057..1079
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1084..1100
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1102..1122
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1124..1161
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1164..1182
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1184..1203
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1204..1222
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1224..1243
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1257..1276
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1278..1303
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1305..1329
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1334..1349
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1923..2076
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          2078..2239
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          2171..2325
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          2389..2552
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          2479..2640
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
ORIGIN      
        1 mddshmdvrk pfaqcialsl sgilflnpiv svaaglaldp aaggnatiga agngvpivni
       61 naangaglsh nkfseynvgs nglilnngtg stqntqlggy imgnpnlkgq aaqvilnevt
      121 gsnrsklagy tevagqsarv ivanphgitc ngcgfintpr atlttgkpvi egqkldrfqv
      181 dggdisiega glnasnidqf dlitrstkln adlyakklnv itgrndvkad dlsvtardad
      241 asakpelaid ssalggmyag airlvgtekg vgvnmsgema astgdiqida ngkvtvagmg
      301 anqaiaikaq sielkgkaya gteatlqaae qiqvqtslaa rdrvqvvdaa qvvnhgiiea
      361 gvntdnsrnd hgevkltagt lenrgnvlas rnleltarqa lnnqngviqg pkvevktarl
      421 vnqgaqarvl aqhelvlttp aianlgglir fgeqqaatlt ldslnnnggr levagadltl
      481 karevsnqkg smiadrveis agrldnqqgl igasqgsatf kvseqlnnng gqlqaqtlle
      541 tqgaellnqg gklladqiki tgtrldnsqk glvsaekgel qvslaqdlin aggklqatsl
      601 lslksasvdn ragtlvapql tltssgkldn qggtvdatgl elhtadidnq ggllqgkdnl
      661 lleardlann qgqvignvlt anldslsqnq ggvlsaeagq ltltvkqhln nalghlqakn
      721 gdvqigsgsl nnqggvvvgn qllltnngll dnrggqlvgd rlslstqrld nqgagllaag
      781 sdgllltlta dgatpgqlln sqgrlqsdgh lqvnggqlnn sggvilgesv ginaagldns
      841 argavvakag glhvalnngv lnnsagvida gdqalkvtql arldnqggtl kgkrlevdgg
      901 aldnrqgqll agsdglnlva gglnnaegmi laqgghgevt lgqgsldnrg gtlqgatlav
      961 tagavdnsal ngkaglissq agnlklvvdr ltnqagklya ngllsasgqt ldnrwggeis
     1021 aqqldlttaa nlynqgglve sagslllvgg nldnsaggri ravggeqsrv slggslynqg
     1081 gslalgsnaf slnagnlnnv ggsiehagng lfkldlggls glqgritglg rgdwdigwvd
     1141 rsglmqlnga ldlstggdln lsagdriasa sglrvgaatl nnagelasdg yltldlggnl
     1201 nnsgllssrg kltvgasnln qnggriasgg dtelnlrgtl dnlgrliasq nlyvsagqin
     1261 nrgtlgalgq mqlrssngit tsadtliysg gdmllrgngl ansygdiysa gnlsfaaldg
     1321 graallsnrs gtiesegdmn lnvallqnam dqyqvgetit qrnivinctd csgdyhtaty
     1381 ivnttyegtm gehsagarlv snrdltinad tvendqslia anrdvsitan nlynrgltln
     1441 krvesisyfl hgvskgafra aeratiawna ananrapgqq dplptvvtqy piyepashtv
     1501 itpgsqsaya stlqagqrlh lqvsgtleng vqseqsraql tgqtlqnnla qvggqvitvn
     1561 aqssaaanqv akdvqriekv gadgttqvsf vpvdfsgvpf aavdptslss frvpqgeygl
     1621 fvksqnpqgr ylietnptft dlsrfmssdy mlgnlnyntd qtwrrlgdgl yetrlirdav
     1681 laqtgqrfla agltsdydqy rylmdnaias kdqlnlsigv sltpaqvasl thdivwmetr
     1741 evqgekvlvp vlylaqaetr nlrggsliqg rdmtliaggd ltnvgtlras ndlsvnaggs
     1801 lyqggliean ervslmaqds vrnalageir gnqvsvtsik gdiindrtav avgygsgnrt
     1861 ildqgsqita rqqldlsagr dltnlgqlas agdaklsagr didllavqdh tftqsairrg
     1921 lvtndtvqtl gssvttggnl elnagrdlav vasqvsagnd lslnakrdiv iasaqdeqss
     1981 tfyqkkkgsw gkskttrsad ssttnvasei saghdlmvnv sqdkdgrisl nggrdvtvvg
     2041 sqlkagndll vgatrdvslv saqeqqdsay sqkkkgsfgl sksgnsrtss sttqvgsels
     2101 agndavvisg tnvnlsassi eakrdaevra glidksgdin lmdaantsss qsdkykskvg
     2161 fsssgsftsi asakksgqen tqsqsvgsvv sggrdttlqa srdvnmigst aaaernlnvg
     2221 agrdvnvlag snssdqsnwk sekhvglsle sdrngvtafl gsealkqksr naeqtvapsq
     2281 llagqdatik agrdltlegs rvdagrdvnl qagrdisida gketsieers ksrdrngltv
     2341 nvshnygntm dalkgtgkge dntskassvl stvdainqft sgpttathfg tasqssssrq
     2401 evhsnspasl gagrdisava gndinirggq fdagrditlv grdinvdvar gsvseeskta
     2461 rsqggingqs gggsaragig gsngvaseqm nqgtntpsvf lagrdvslea rnnltligtq
     2521 vqagrdidlg agndltiraa qndsssesnr hsgggevgla vggkdfisvy asvdmgkgql
     2581 drdnqrqqna nlvagdqlrf ssgkdttiag atlrggevig rvggdltvss vpdtgkvsgk
     2641 emdasvtvsi glggggsvsg slgmgkttgk tnwvqeqtsi tgkngvdirt ekhtqldgal
     2701 vaadngnlkl dtgtlgfrdi sgqdkehsyy vnaggtfgwg ggdgakatgg kdvafttdks
     2761 qegkgktgas gwsvsgydyr kereqevrat vgagtitvrn daktgadsta glnrdvalay
     2821 eitkdkekrt dlyvsqssle svnhpiqtln qwkegmknyg knasgiftqf gdlskaadqv
     2881 vadnpsllpl awipglletv ldkagkytgg impgvenhgg litqvpalit gdmrfyrvet
     2941 kyqyesdgkt ikvdplsgkp mienvqklme ierpdgdgav ftngiqnslm aalvngamqt
     3001 gsdsfmqayn pehgilgdlv eslwdvalgg tvrsgnaqql hdffqagikd eykldvaghs
     3061 qgglltyrai sgldfnlngq vgsiqlsgap vgsksffeaa daagfdigng affqvnrpgs
     3121 ktffgmlpvt dtvsdllgqn fthssdpvar ffgslatsts lmgvdsphsn ylcvakgmcg
     3181 dapnalqdqf kknpryiept fidangkdti rr
//
LOCUS       WP_258028627             141 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1430 domain-containing protein, partial [Staphylococcus aureus].
ACCESSION   WP_258028627
VERSION     WP_258028627.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018897.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07242.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..141
                     /product="DUF1430 domain-containing protein"
     Region          <1..141
                     /region_name="bact_immun_7tm"
                     /note="bacteriocin-associated integral membrane (putative
                     immunity) protein; TIGR01654"
                     /db_xref="CDD:273736"
ORIGIN      
        1 vkniekyhld geisgitnyk dsvmemyhen nlkltvlnfs qiiiaiilii iilfdvkyyf
       61 eqhrkllvik klygystlra nyqyllinni vvifigiltn vilhshyimm lfatilvvqi
      121 llqicslyyh grrfnevike f
//
LOCUS       WP_258028629             223 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Staphylococcus aureus].
ACCESSION   WP_258028629
VERSION     WP_258028629.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017416.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05598.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..>223
                     /product="transposase"
     Region          <1..113
                     /region_name="COG3666"
                     /note="Transposase, IS1182 family [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:442883"
ORIGIN      
        1 hhrgatsyhp kmmlkiilya ytqsvfsgrr iekllhdsir mmwlaqnqtp syktinrfrv
       61 npntdalies lfiqfhsqcl kqnlidnnsi fidgtkvean anrytfvwkk siqnheskln
      121 ensktlyrdl veekiipeik edgdsdltie eidligshld keiedlnhsi enedcaqirk
      181 qtrkkrteik kfkkkfddys erknkyeeqk silkdrnsfs ktd
//
LOCUS       WP_258028659             396 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [Pseudomonas].
ACCESSION   WP_258028659
VERSION     WP_258028659.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..396
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=41757
     Region          26..386
                     /region_name="CynX"
                     /note="Cyanate permease [Inorganic ion transport and
                     metabolism]; COG2807"
                     /db_xref="CDD:442057"
ORIGIN      
        1 mipvryrilc iysgmlaltq yewmrfapit dqvstqygit ygevgslsla vtalalplal
       61 psgglidris vqtalritai amllaalirv lqphyeylla gqllfgfvqp ltmsllvklm
      121 itwfsedehv rvttlfstvi flgigsafmi vplteegnvs ssllidvail glialltfiy
      181 vprdgplvqt tsaptksggr llaegidllr tapftavllm ifltngyfsa ittwlepill
      241 rqgidaqvsg fivvlmlagg iagmtfmpll vrsgasvggi lsgvsllagg gtvllftsgs
      301 pwilslagiv igaallsplp lllqliadta glsrsgtats ifwlvgniga timiatlgvi
      361 adhgdwgmaa vllclvlvvq itislmgfrm vgartt
//
LOCUS       WP_258028669            3392 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF637 domain-containing protein [Pseudomonas protegens].
ACCESSION   WP_258028669
VERSION     WP_258028669.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas protegens
  ORGANISM  Pseudomonas protegens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04830.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3392
                     /organism="Pseudomonas protegens"
                     /db_xref="taxon:380021"
     Protein         1..3392
                     /product="DUF637 domain-containing protein"
                     /calculated_mol_wt=350484
     Region          23..41
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          51..70
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          72..90
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          92..111
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          113..131
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          134..152
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          154..171
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          174..192
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          194..213
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          215..233
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          236..255
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          258..276
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          278..296
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          298..315
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          319..337
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          339..357
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          359..377
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          379..397
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          400..418
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          417..1914
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          420..439
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          441..459
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          462..480
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          482..501
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          503..521
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          523..542
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          565..584
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          586..604
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          609..624
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          626..646
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          648..667
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          669..687
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          689..727
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          729..748
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          750..768
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          771..789
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          791..809
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          811..829
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          832..850
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          852..871
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          873..891
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          893..912
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          914..931
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          935..953
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          956..974
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          976..994
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          996..1016
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1021..1037
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1039..1057
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1059..1078
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1098..1116
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1118..1136
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1138..1160
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1162..1181
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1186..1201
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1203..1221
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1223..1241
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1244..1265
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1267..1285
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1288..1309
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1311..1328
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1331..1349
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1351..1370
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1372..1391
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1393..1411
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1457..1476
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1478..1497
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1499..1519
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1521..1539
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1541..1561
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1564..1582
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1584..1602
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1604..1622
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1624..1646
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1651..1666
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1669..1689
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1691..1710
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1730..1748
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1750..1767
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1769..1809
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1811..1827
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1829..1846
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1849..1867
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1869..1894
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1896..1913
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1921..1963
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1965..1983
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1985..2003
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2412..2431
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2432..2450
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2452..2471
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2473..2493
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2495..2514
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2517..2536
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2538..2556
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2626..2777
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          2904..3047
                     /region_name="DUF637"
                     /note="Possible hemagglutinin (DUF637); pfam04830"
                     /db_xref="CDD:428148"
ORIGIN      
        1 madataekga vaikagslea qggvyagsel kvqtpgdlss qktlaardri tldsggqlsn
       61 kgiieagvna dnsrnangdi slnardldnr gksivasrdl tlnmaqildn rggtlsgqhq
      121 vkvsagtldn qnqgrvlssd slvlqatqvl nhnalitsdg qlkaeighlg nrhgelssls
      181 rvrlqlaald nvaglvmage tldinasgai dnrggalgae rllkvqaasl dnskagnlrs
      241 ekrlevlvag rldnqdrgli qanqamevqa gqldnrkgri sgsdtlvvrg esadnrggvi
      301 radqalglhs rdvdnrdkgr lesrtavtve gnrldnsggl lsatstltln sgevlnhagr
      361 iaskgelhaq vdslaqhgge lvaegtlhlq gqsldnrdqg lvaslkaltl dvvevdnrgg
      421 alsgqgevqv ngqglnnsdg gkvladqrll lqvarvinqn qgllfskqgl tlsgdsldns
      481 ggqlvsqkpl lltlsaaldn qrglisgedl ltlkvgsldn rggrltgara lsidsrgall
      541 nqggsivaeq gltldsisln nsdkgvisak adarlgtgaf dnsqggslts agqltlttaq
      601 ltnnqgrigs dqalnasitg lqqqggelfs nadltldlnh glldnqggnl htpgqlllrn
      661 ldrvdnrsge isgakafsln areldngagk llsnqaltlr ieqalanvkg lisaaaidsr
      721 sasldsrdgq lhsrgdsqlq vsghadnqga illaegqmtl kaasldnrqe glvgatrald
      781 lqvgrldnrg gevssrqidl sgerldnsdq grllasgdlt lkvarvlnqn lglisadqdl
      841 slsgigldnr ggqlvggqrl dlelgedldn rkgrissegr laiqarnlnn drgslssgga
      901 lqvsagqals nqggkllsda gltlasarld nqqqgiisak grlslttgal dnsqggnlns
      961 gdelslnaaq vnneqgsigs akaltasvtg lqqqggklfs ksrlsldlnh gtlnnqggli
     1021 napgvlllsn lgavdnrqge issqqafela arsldnsagq llsnqaltlr iegaltalkg
     1081 kiaaaalqid aasldhsgsl lsdseldlrv tgplrnqgli qaagplqisa ngldnqggrl
     1141 lggtrvgidl gaqgsdldnr qglintqgvl siaglrdlqn qageisstqg fnlagrsldn
     1201 sggklishqq lgveavnlgn qqglisgwqg lkvsggsldn rqqgtlssll gdlnidlsga
     1261 llnsaqggla sqgqltlkaa sldnsdkgiv tskgeqqlil gsgglnnarg gliessasld
     1321 igagdldnqg grlsavggln ftgnslnnqg gnlrgegavt ldllgalvnt qgklaasgpl
     1381 llkrssridn qdgqlvsqnl mtlfsnsldn snrgtlaang alqvnvsgev rnqndgliys
     1441 rdaglslsag slnnakgaiq sakaqtlaat ggidnqggkl iaedgdldiq gasldnragv
     1501 lsslkglfqa risgvlnnhg gqaeaqrldl qalagfdnga grmaakggdl llnagsagvd
     1561 nshgglyasg rvkasgnqld nstgqingqh idldfngslv nqggliesre slalrgasld
     1621 nqggklrala pggktdlqig glfdnrngll esantdltla asgflnqggs llhlgegnfd
     1681 iatgnvinag gslvtrgglt ltadswtnss viqagrlnld vnhfsqtaag qllasqhlqa
     1741 rggnwnndgl lasdgsldlq iggtysgngr vsslgtlgfg aaqlnlgaag siaggggtqv
     1801 tvagqlnnag rltsnaglsv naggvlntgt lggaqglslt tptlvndhgf vfsgqnasln
     1861 vntltnsyge fyslggltva gmaagtsaqn lrnisgniqs ggdiniaald lvndrekyea
     1921 sqqitdgrmt ircvqhcggg aswvrgpvfi yrtvegvvts dspqstlnag gnltvnstsf
     1981 lnrystvsag ndlsitsgti tnqaslvasg ssgyevgagv kinrglffql ardvqaydra
     2041 hpqgsafnqe dfaalvakfn pgifygidrp vetstqstsa apaiiqaggk arltaandis
     2101 nisvvknaia vggstrdtav gasskplmvv lhsqlppdla qqqvnplslp nfslpsgqng
     2161 lfrlsgqgga aqpsapaqsw smggaslels trqagpepvq prelsnrplp qvalgardln
     2221 lvdhqatgid graatvqvna vagdspggvl lptgsagnqs vnrvqglpds svrsnphkyl
     2281 ietnplltdl kqfmgsdyll sklgydpdqs akrlgdgfye qrliqqavta rtgqrfldgq
     2341 nsdegmfkyl mnnaiaskds lnlavgvtlt sqqvaalthd ivwleeqevn gekvlvpvly
     2401 lanannrlap ngalvqgrdv tliagkdlvn sgtlrasenl satagtdlin gglieagnrl
     2461 nllagdnvvn qsggiiagrd vtvralagdv inersittfq snpgsttqrl dyadnagrie
     2521 arndlnvgag rdinniggvl ssggdttlia ardvnlvsaq ehdkltrdry lnesitqhgs
     2581 svsvgrdlav sagrdltava sqieakrnia mdaagdltla saadeqhsys ktkkvtrqed
     2641 hvsqvgtslt agadvvlsag kdlslissri sagneaylva gdnlellaaq dsdyslydmk
     2701 kkgswgtkkt rrdevtqvtn igseittggd ltlksggdqk yqvaklesak dltldsggai
     2761 tfegvkdlhd eshtksnnna fwnsskgrgn tdetlrqssl vaggsltika veglkidikh
     2821 idqksvsqai damvkadpql awlkqaearg dvdwrqvkei hesfkynnsg lgpaaqliia
     2881 ialsavmgpm magmntmlqa vsvsvatkat vstidnrgnl gkvlkdvtsk esikgytvaa
     2941 atagvaqgln ynpsamglda kslqtvavkv tadaliktav yggsfkdnla saaagtaasi
     3001 ggaygagkig dlglteggla kialhaglgg llseamggdf rtgaiaggan ellvgvlgdk
     3061 llpdnlipgs peyiqaqanl malsqivgvl gasasggdms iasavaangt qynylthqaf
     3121 devgnclsgr tcstdeqkka avakaeklse wldsemrslc dkaptsdscr aavnasikyv
     3181 amkdawnimn kdvtrssknt fdylyntega agrlvtylnt idnranffga shvyeqnmgv
     3241 gakwfggaee vsragwtglg addnlsyitf gvgrlmapvy dwrkaagdal itggfenfkn
     3301 lynkatsdpv awdikqlkge qtilqpiheq ymgdrsaftw lsglvtdtsi mpeimigdrk
     3361 gmdggvdild yksrvefgck llgysksqgc ap
//
LOCUS       WP_258028695             254 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6038 family protein, partial [Staphylococcus aureus].
ACCESSION   WP_258028695
VERSION     WP_258028695.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 254)
  AUTHORS   Lin,W.S., Cunneen,T. and Lee,C.Y.
  TITLE     Sequence analysis and molecular characterization of genes required
            for the biosynthesis of type 1 capsular polysaccharide in
            Staphylococcus aureus
  JOURNAL   J Bacteriol 176 (22), 7005-7016 (1994)
   PUBMED   7961465
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039632.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19504.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>254
                     /product="DUF6038 family protein"
     Region          1..>253
                     /region_name="DUF6038"
                     /note="Family of unknown function (DUF6038); pfam19504"
                     /db_xref="CDD:437336"
ORIGIN      
        1 mpsddivkkl yskedirlel gltphkfnkk metiaklfki dmkifhnykg qdknnqytfn
       61 gvakelikvl lksvdyypvd inskkfkqng kskkemieni dnssymkyiy qlmksineiq
      121 ykrliadihm kdvyqntkaw lnngesinkk eqelyqymti lplhkrvelq nevlksidet
      181 ifqflakehr nnqieennel eaytkaikeg rnpkndyeln hllykknqlp ldsliediwd
      241 yeeteyteld wlia
//
LOCUS       WP_258028702             227 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase, partial [Streptomyces
            fradiae].
ACCESSION   WP_258028702
VERSION     WP_258028702.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces fradiae
  ORGANISM  Streptomyces fradiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 227)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 227)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Streptomyces fradiae"
                     /db_xref="taxon:1906"
     Protein         <1..227
                     /product="SDR family NAD(P)-dependent oxidoreductase"
     Region          2..225
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(84,112,125,129)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 aaghrvvlta rredriktla aeltgaghqa eayaldvtdr pavdafaasl drcdvlvnna
       61 ggalgadpva tgdpedwrrm ydvnvlgtlh mtqallpalt asgagtvvvv sstaghatye
      121 ggagyvaakn garvlaetlr leivgtpvrv vevapgmvkt eefattrfrg dteraakvye
      181 gvadplsadd vadtiawavs rpphvnidll vvrpraqasn hkvhrei
//
LOCUS       WP_258028703             463 aa            linear   BCT 02-MAR-2025
DEFINITION  CoA transferase [Streptomyces fradiae].
ACCESSION   WP_258028703
VERSION     WP_258028703.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces fradiae
  ORGANISM  Streptomyces fradiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 463)
  AUTHORS   Heider,J.
  TITLE     A new family of CoA-transferases
  JOURNAL   FEBS Lett 509 (3), 345-349 (2001)
   PUBMED   11749953
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014564.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02515.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Streptomyces fradiae"
                     /db_xref="taxon:1906"
     Protein         1..463
                     /product="CoA transferase"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=48610
     Region          16..>223
                     /region_name="TrxB"
                     /note="Thioredoxin reductase [Posttranslational
                     modification, protein turnover, chaperones]; COG0492"
                     /db_xref="CDD:440258"
     Region          187..>413
                     /region_name="CaiB"
                     /note="Crotonobetainyl-CoA:carnitine CoA-transferase CaiB
                     and related acyl-CoA transferases [Lipid transport and
                     metabolism]; COG1804"
                     /db_xref="CDD:441409"
ORIGIN      
        1 mvvgggaagl ngalvlarsr rsvlvvdsga prnapaeavh gfivldgtap seilargreq
       61 vrhyggrvvf gelasaepae pvagdprfal tladgrgvsa rrvlvatglr dvlpevpgla
      121 ghwgrgvvhc pychgwevrd epigilatgp gslhhallfr qltddlvyfs hgtrvdrdtr
      181 arlaargirv idtavtgiva dagaptgvrl adgtvvarrv iavatrtlal lgadvlrvda
      241 pglpesqeah ndtglgkrsa lldlahgadr rifdelldaa dvvvtgyrpg aldrfglape
      301 alaerrpglv varlsawgay gpwggrrgfd slvqaatgia llegdegrpg alpaqaldhg
      361 tgylvaagvl ralterrrgg gtwrveaala qtarwlthgt epeaprager pgrpyepgaw
      421 lverdaplgr lrhalspvsy eggpadwarp pgrwgadepr wta
//
LOCUS       WP_258028720             372 aa            linear   BCT 02-MAR-2025
DEFINITION  SAM-dependent methyltransferase, partial [Streptomyces fradiae].
ACCESSION   WP_258028720
VERSION     WP_258028720.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces fradiae
  ORGANISM  Streptomyces fradiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 372)
  AUTHORS   Carilla-Latorre,S., Gallardo,M.E., Annesley,S.J., Calvo-Garrido,J.,
            Grana,O., Accari,S.L., Smith,P.K., Valencia,A., Garesse,R.,
            Fisher,P.R. and Escalante,R.
  TITLE     MidA is a putative methyltransferase that is required for
            mitochondrial complex I function
  JOURNAL   J Cell Sci 123 (Pt 10), 1674-1683 (2010)
   PUBMED   20406883
REFERENCE   2  (residues 1 to 372)
  AUTHORS   Sadreyev,R.I., Tang,M., Kim,B.H. and Grishin,N.V.
  TITLE     COMPASS server for remote homology inference
  JOURNAL   Nucleic Acids Res 35 (Web Server issue), W653-W658 (2007)
   PUBMED   17517780
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014673.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02636.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Streptomyces fradiae"
                     /db_xref="taxon:1906"
     Protein         <1..372
                     /product="SAM-dependent methyltransferase"
                     /EC_number="2.1.1.-"
     Region          12..>233
                     /region_name="Methyltransf_28"
                     /note="Putative S-adenosyl-L-methionine-dependent
                     methyltransferase; cl46525"
                     /db_xref="CDD:480865"
ORIGIN      
        1 pgpwrgwraa aeealygpgg fylrpegpag hfrtsvhasr lyagavarll vrvagelraa
       61 gdldevvfvd mgagrgelvt gvlaaldasa apgagggatg tgvpaggpgt thgpggagpg
      121 agpggarpep grlpegvrlr ayaveraprp agldprvewv aeppagvrgl lfanewldnv
      181 pvevaqvddd gtpryvevrr dgaerlgppv rgadagwldr wwplrgpgar aeigrprdea
      241 waaaagtvaa glavavdyah tagarppygt ltgfrdgrev ppvpdgtrdl tshvaldaca
      301 aaasgpaell sqrdalrrlg vsgqrpplal assdpaayvr alagageaae ltargglgdf
      361 twllqgrpag gy
//
LOCUS       WP_258028722              60 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase, partial [Staphylococcus aureus].
ACCESSION   WP_258028722
VERSION     WP_258028722.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 60)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..60
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>60
                     /product="PfkB family carbohydrate kinase"
     Region          1..>60
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
ORIGIN      
        1 miltltlnps vdisypltal klddvnrvqe vsktaggkgl nvtrvlaqvg epvlasgfig
//
LOCUS       WP_258028726             625 aa            linear   BCT 02-MAR-2025
DEFINITION  G5 domain-containing protein, partial [Staphylococcus aureus].
ACCESSION   WP_258028726
VERSION     WP_258028726.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 625)
  AUTHORS   Ruggiero,A., Tizzano,B., Pedone,E., Pedone,C., Wilmanns,M. and
            Berisio,R.
  TITLE     Crystal structure of the resuscitation-promoting factor
            (DeltaDUF)RpfB from M. tuberculosis
  JOURNAL   J Mol Biol 385 (1), 153-162 (2009)
   PUBMED   18992255
REFERENCE   2  (residues 1 to 625)
  AUTHORS   Bateman,A., Holden,M.T. and Yeats,C.
  TITLE     The G5 domain: a potential N-acetylglucosamine recognition domain
            involved in biofilm formation
  JOURNAL   Bioinformatics 21 (8), 1301-1303 (2005)
   PUBMED   15598841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019142.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07501.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>625
                     /product="G5 domain-containing protein"
     Region          17..49
                     /region_name="YSIRK_signal"
                     /note="Gram-positive signal peptide, YSIRK family;
                     TIGR01168"
                     /db_xref="CDD:273479"
     Region          18..>163
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          167..392
                     /region_name="Bact_lectin"
                     /note="Bacterial lectin; pfam18483"
                     /db_xref="CDD:465784"
     Region          425..498
                     /region_name="G5"
                     /note="G5 domain; pfam07501"
                     /db_xref="CDD:462185"
     Region          501..548
                     /region_name="SasG_E"
                     /note="E domain; pfam17041"
                     /db_xref="CDD:407216"
     Region          555..624
                     /region_name="G5"
                     /note="G5 domain; pfam07501"
                     /db_xref="CDD:462185"
ORIGIN      
        1 mrdkkgpvnk rvdflsnkln kysirkftvg tasiligslm ylgtqqeaea aennienptt
       61 lkdnvqskev kieevtnkdt apqgveakse vtsnkdtieh epsvkaedis kkedtpkeva
      121 dvaevqpkss vthnaetpkv rkarsvdegs fditrdsknv vestpitiqg kehfegygsv
      181 diqsnpedlk vsevtrfnnk sigkneltga lqlknkvsfk ndfefnirva nnhqsvttga
      241 dgwgflfskg dgneylqkgg ilgpkgmens agfkidtgyn fkdpmdkeek qagqgfkgyg
      301 tfvktgadgt takvgtnipt rgkadnsfqy adnsidttdg kfhgqllnnl klayneksgi
      361 mraeyagkiw eanisdlgld kseaynflit ssqrqgtsqg vyangwmrtd lnnstfkltp
      421 nlvnktetkt veipfetkre fnpklqpgee rvkqegqpgs ktittpitvn pltgekvgeg
      481 qpteeitkqp vdkivefgge kipqghkdif dpnlptdqte kvpgkpgikn pdtgkvieep
      541 vddvikhgpk tgtpetktve ipfetkrefn pklqpgeerv kqegqpgskt ittpitvnpl
      601 tgekvgegqp teeitkqpid kivef
//
LOCUS       WP_258028736             126 aa            linear   BCT 02-MAR-2025
DEFINITION  GAF domain-containing protein, partial [Streptomyces fradiae].
ACCESSION   WP_258028736
VERSION     WP_258028736.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces fradiae
  ORGANISM  Streptomyces fradiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 126)
  AUTHORS   Hughes,J.
  TITLE     Phytochrome three-dimensional structures and functions
  JOURNAL   Biochem Soc Trans 38 (2), 710-716 (2010)
   PUBMED   20298248
REFERENCE   2  (residues 1 to 126)
  AUTHORS   Heikaus,C.C., Pandit,J. and Klevit,R.E.
  TITLE     Cyclic nucleotide binding GAF domains from phosphodiesterases:
            structural and mechanistic insights
  JOURNAL   Structure 17 (12), 1551-1557 (2009)
   PUBMED   20004158
REFERENCE   3  (residues 1 to 126)
  AUTHORS   Aravind,L. and Ponting,C.P.
  TITLE     The GAF domain: an evolutionary link between diverse
            phototransducing proteins
  JOURNAL   Trends Biochem Sci 22 (12), 458-459 (1997)
   PUBMED   9433123
REFERENCE   4  (residues 1 to 126)
  AUTHORS   Santero,E., Hoover,T.R., North,A.K., Berger,D.K., Porter,S.C. and
            Kustu,S.
  TITLE     Role of integration host factor in stimulating transcription from
            the sigma 54-dependent nifH promoter
  JOURNAL   J Mol Biol 227 (3), 602-620 (1992)
   PUBMED   1404379
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013736.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01590.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Streptomyces fradiae"
                     /db_xref="taxon:1906"
     Protein         <1..>126
                     /product="GAF domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
     Region          25..>126
                     /region_name="GGDEF"
                     /note="GGDEF domain, diguanylate cyclase (c-di-GMP
                     synthetase) or its enzymatically inactive variants [Signal
                     transduction mechanisms]; COG2199"
                     /db_xref="CDD:441801"
ORIGIN      
        1 gagsgsgsas rsgagpgpgt gpgswwrvaa lrrrgrgscv iapivlhgra wgelyvarpa
       61 gapvfdrada dfatvlasvv aaglaqterl eevrklaftd pltglanrra vdarldeave
      121 rhladg
//
LOCUS       WP_258028767             200 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase, partial [Streptomyces fradiae].
ACCESSION   WP_258028767
VERSION     WP_258028767.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces fradiae
  ORGANISM  Streptomyces fradiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 200)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 200)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Streptomyces fradiae"
                     /db_xref="taxon:1906"
     Protein         1..>200
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          4..>194
                     /region_name="XylB"
                     /note="Sugar (pentulose or hexulose) kinase [Carbohydrate
                     transport and metabolism]; COG1070"
                     /db_xref="CDD:440688"
ORIGIN      
        1 mgivagldss sgftrvvvcd tdtgavlrqg yaahpvepka advdpqawll slgeaaaggl
       61 legvqaigvc aqahglvald qqgaavrpam vgndkraqva aadlvealgg rqawadavgc
      121 vpqaaqpvak lrwlartepe aarrvaavlq pqdwlvwqll grparrttdr ggasgtgyws
      181 aatgayrpdl velalgyrva
//
LOCUS       WP_258028774             139 aa            linear   BCT 02-MAR-2025
DEFINITION  TetR/AcrR family transcriptional regulator C-terminal
            domain-containing protein, partial [Streptomyces fradiae].
ACCESSION   WP_258028774
VERSION     WP_258028774.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces fradiae
  ORGANISM  Streptomyces fradiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 139)
  AUTHORS   Hinrichs,W., Kisker,C., Duvel,M., Muller,A., Tovar,K., Hillen,W.
            and Saenger,W.
  TITLE     Structure of the Tet repressor-tetracycline complex and regulation
            of antibiotic resistance
  JOURNAL   Science 264 (5157), 418-420 (1994)
   PUBMED   8153629
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014906.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02909.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Streptomyces fradiae"
                     /db_xref="taxon:1906"
     Protein         1..>139
                     /product="TetR/AcrR family transcriptional regulator
                     C-terminal domain-containing protein"
                     /GO_process="GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
     Region          2..>111
                     /region_name="TetR_C_33"
                     /note="Tetracyclin repressor-like, C-terminal domain;
                     cl38988"
                     /db_xref="CDD:476841"
ORIGIN      
        1 mpapeeerrq virrrasspr rvrsrhhgai glresrstpe patprhrdav pgrprragls
       61 laptahaltv ldsyvygfal qekaprftad gstepgcayg dafafgpdpv lgglrrravd
      121 raeggrgrlp grrdgepgg
//
LOCUS       WP_258028787             110 aa            linear   BCT 02-MAR-2025
DEFINITION  type II toxin-antitoxin system RelE/ParE family toxin [Streptomyces
            fradiae].
ACCESSION   WP_258028787
VERSION     WP_258028787.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces fradiae
  ORGANISM  Streptomyces fradiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05973.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Streptomyces fradiae"
                     /db_xref="taxon:1906"
     Protein         1..110
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /calculated_mol_wt=12328
     Region          8..104
                     /region_name="COG4683"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:443719"
ORIGIN      
        1 meklavidgr sarqvedaid alaefgptlg rplvdrirgs eqhhmkelrp gssgrsevri
       61 lfafdpvrra vlllagdkag srqrwydsni plaekrygeh laeldtreye
//
LOCUS       WP_258028803             211 aa            linear   BCT 02-MAR-2025
DEFINITION  protein kinase domain-containing protein, partial [Streptomyces
            fradiae].
ACCESSION   WP_258028803
VERSION     WP_258028803.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces fradiae
  ORGANISM  Streptomyces fradiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 211)
  AUTHORS   Hunter,T. and Plowman,G.D.
  TITLE     The protein kinases of budding yeast: six score and more
  JOURNAL   Trends Biochem Sci 22 (1), 18-22 (1997)
   PUBMED   9020587
REFERENCE   2  (residues 1 to 211)
  AUTHORS   Hanks,S.K. and Hunter,T.
  TITLE     Protein kinases 6. The eukaryotic protein kinase superfamily:
            kinase (catalytic) domain structure and classification
  JOURNAL   FASEB J 9 (8), 576-596 (1995)
   PUBMED   7768349
REFERENCE   3  (residues 1 to 211)
  AUTHORS   Hanks,S.K. and Quinn,A.M.
  TITLE     Protein kinase catalytic domain sequence database: identification
            of conserved features of primary structure and classification of
            family members
  JOURNAL   Methods Enzymol 200, 38-62 (1991)
   PUBMED   1956325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00069.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Streptomyces fradiae"
                     /db_xref="taxon:1906"
     Protein         1..>211
                     /product="protein kinase domain-containing protein"
                     /GO_function="GO:0004672 - protein kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006468 - protein phosphorylation
                     [Evidence IEA]"
     Region          109..>211
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 medyagrvla dryrlpvvpd gtdgyedadg ygrgdayghg dghghpdeag yagaygpvet
       61 rafdtysgqe vmvrqlplpe tvdaevvdad gayhrpyght prrsadrvaa dpnvrravea
      121 vqavaripdh prldqvfdvf tedgslwivs elvagrplaa lvhaepltpy raaeiandvl
      181 talrtlhahg wthrnittrt vlvcddgrvv l
//
LOCUS       WP_258028821            1167 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein
            [Pseudomonas protegens].
ACCESSION   WP_258028821
VERSION     WP_258028821.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas protegens
  ORGANISM  Pseudomonas protegens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 1167)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1167
                     /organism="Pseudomonas protegens"
                     /db_xref="taxon:380021"
     Protein         1..1167
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=130631
     Region          1..1167
                     /region_name="PRK09959"
                     /note="acid-sensing system histidine kinase EvgS"
                     /db_xref="CDD:182169"
ORIGIN      
        1 measpedwlw lrhkselkvg vsasesapfs iktaenqyeg isadttnlis qllgvplkvv
       61 pfandeeaeq aliagtidli sgnhgqaspl dlifskpytq drlavfkrrs esrhspanla
      121 glsvavtreh inelqqlypr anfkvysdhd kaiaaaafgq advylddlys ayyqinrsfy
      181 gylsferfse lsidgyryaf rgdntrlqgl vnsaivaige nqmrhfamrw vgnnfvprsd
      241 pidltvqesr wierhpvvrl vinddlapsa yfdsngvfig svadllevit lstglhfqvt
      301 sysgsfsqim nalqtgdsdl almtaspere eflrfsrplf vdpfvlltns qekhklvdla
      361 dkrvaiatgh vaikslqely pkailieags tvnsmnllye gqvdaavtal paaryyierl
      421 frdklvvtqa ldiepgtisf ayqrrdaelq siiekvlqsm epdelntlyn rwrsppgmsg
      481 etwinyervi rqivlaavvm lllalvwvfy lrrevkvrtk aeqklndqlr fvetltdcmp
      541 pslyvcdsng rmvscnrsfl ksvglsseqv lnktsdqlps qhfesslefh qehlhairds
      601 qtiesvhtiq lqgkevwish wvqpfqnskg itqgiicgwl ditehrqlvq qlqeakshad
      661 easrakssfl atmsheirtp mnavigilel alkradsvpi drasieiaht saksllelig
      721 dildiaries grlslspkrt nlreliesva rvfeglarqk rlnlvleids sincdvlvdt
      781 lrfkqilsnl vsnaikftee gavkvsitgv lidssllnvr lsvedtgvgi sltdqqrlfr
      841 pftqvqrivq qtegsglglv icrslcemmg grlsmnsalg rgtqidvelr lqvlerisis
      901 pmlatpvhkq ryrlqvlvvd dhkvnrkvls qqlaflghdv seaengregf ehwreqpfdi
      961 vitdchmpim ggieltrair raelesaqep tviigltada qpeelelcil agmndclikp
     1021 igiddldarl lehyladdvd qpateqlisi pdsfklvdla plellisnep ikfqqildel
     1081 iksnrkdcqm mqvllqngei dslvelahri kgaarvvkge qlveccrrle tacqnskids
     1141 gqlqqlvgqv evaiaaleha llslrqq
//
LOCUS       WP_258028842              62 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6360 family protein [Pseudomonas protegens].
ACCESSION   WP_258028842
VERSION     WP_258028842.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas protegens
  ORGANISM  Pseudomonas protegens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040388.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19887.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..62
                     /organism="Pseudomonas protegens"
                     /db_xref="taxon:380021"
     Protein         1..62
                     /product="DUF6360 family protein"
                     /calculated_mol_wt=6699
     Region          <6..60
                     /region_name="DUF6360"
                     /note="Family of unknown function (DUF6360); pfam19887"
                     /db_xref="CDD:437719"
ORIGIN      
        1 mpidrttdyf essegavrlw ieqgsaihlk aisphndpve ltaeqalela lalqrlagrl
       61 ad
//
LOCUS       WP_258028902             289 aa            linear   BCT 02-MAR-2025
DEFINITION  PAS domain-containing protein, partial [Streptomyces fradiae].
ACCESSION   WP_258028902
VERSION     WP_258028902.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces fradiae
  ORGANISM  Streptomyces fradiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 289)
  AUTHORS   Hefti,M.H., Francoijs,K.J., de Vries,S.C., Dixon,R. and Vervoort,J.
  TITLE     The PAS fold. A redefinition of the PAS domain based upon
            structural prediction
  JOURNAL   Eur J Biochem 271 (6), 1198-1208 (2004)
   PUBMED   15009198
REFERENCE   2  (residues 1 to 289)
  AUTHORS   Ponting,C.P. and Aravind,L.
  TITLE     PAS: a multifunctional domain family comes to light
  JOURNAL   Curr Biol 7 (11), R674-R677 (1997)
   PUBMED   9382818
REFERENCE   3  (residues 1 to 289)
  AUTHORS   Zhulin,I.B., Taylor,B.L. and Dixon,R.
  TITLE     PAS domain S-boxes in Archaea, Bacteria and sensors for oxygen and
            redox
  JOURNAL   Trends Biochem Sci 22 (9), 331-333 (1997)
   PUBMED   9301332
REFERENCE   4  (residues 1 to 289)
  AUTHORS   Borgstahl,G.E., Williams,D.R. and Getzoff,E.D.
  TITLE     1.4 A structure of photoactive yellow protein, a cytosolic
            photoreceptor: unusual fold, active site, and chromophore
  JOURNAL   Biochemistry 34 (19), 6278-6287 (1995)
   PUBMED   7756254
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020037.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08448.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Streptomyces fradiae"
                     /db_xref="taxon:1906"
     Protein         1..>289
                     /product="PAS domain-containing protein"
     Region          16..149
                     /region_name="GAF_2"
                     /note="GAF domain; pfam13185"
                     /db_xref="CDD:433019"
     Region          189..275
                     /region_name="PAS_4"
                     /note="PAS fold; pfam08448"
                     /db_xref="CDD:312075"
ORIGIN      
        1 msgadpprds ggldaavaet mrrtgasvaa fyllvperev lqmvtvggvp adlaapwarv
       61 alaspapvad aarergmvwi gdhaeltrry prsavslpyq lalaalpveg drlwgvllli
      121 wpgshpprtt rrersnlass srrlarllde aadagrppta prtprvlgae dirrpagpey
      181 lmaaadfaer lpegccaldl qgrvtfvtar gaallgadpr tllgtfpwqs lpwlgdpvye
      241 dryraavvsr rpvvftaclp pdrwlefrlh pdasgvsvqi tpvasgwsr
//
LOCUS       WP_258028922             165 aa            linear   BCT 02-MAR-2025
DEFINITION  DALR anticodon-binding domain-containing protein, partial
            [Streptomyces fradiae].
ACCESSION   WP_258028922
VERSION     WP_258028922.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces fradiae
  ORGANISM  Streptomyces fradiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 165)
  AUTHORS   Wolf,Y.I., Aravind,L., Grishin,N.V. and Koonin,E.V.
  TITLE     Evolution of aminoacyl-tRNA synthetases--analysis of unique domain
            architectures and phylogenetic trees reveals a complex history of
            horizontal gene transfer events
  JOURNAL   Genome Res 9 (8), 689-710 (1999)
   PUBMED   10447505
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017555.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05746.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Streptomyces fradiae"
                     /db_xref="taxon:1906"
     Protein         <1..165
                     /product="DALR anticodon-binding domain-containing
                     protein"
                     /GO_function="GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
     Region          <46..164
                     /region_name="argS"
                     /note="arginyl-tRNA synthetase; Reviewed; PRK01611"
                     /db_xref="CDD:234964"
ORIGIN      
        1 pphydlaalp pdvrqwallr paphdrvlda apllrqtesg nglftvqyah arsaallrna
       61 adlgfsaaye dgphdahpga aellaalgdh pavllaaarq hapdrlarhl evladaflgf
      121 qhtvlplgde kpsaahrsrl alaeaagtvl agglsllgvs aptrl
//
LOCUS       WP_258028964             255 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Streptomyces fradiae].
ACCESSION   WP_258028964
VERSION     WP_258028964.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces fradiae
  ORGANISM  Streptomyces fradiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 255)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Streptomyces fradiae"
                     /db_xref="taxon:1906"
     Protein         <1..>255
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>248
                     /region_name="PRK12740"
                     /note="elongation factor G-like protein EF-G2"
                     /db_xref="CDD:237186"
ORIGIN      
        1 gkttlveala ltagavnrag rvedgttlsd hdeiehrtqr svqlslvple wagckinlld
       61 apgyadfvge lraglraada alfvvsaaqe adavpgstrl lweecaavgm praivvthld
      121 tartdydrlt rvcgevlggd dpdavlplyl pvlgpeapdg hapatglvgl ltrevldyst
      181 garrenppdd tqlplieear nrliegiiae sedetlmdry lggeeidlks lvadlekava
      241 rgtfhpvlaa apaap
//
LOCUS       WP_258028932              89 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5955 family protein, partial [Streptomyces fradiae].
ACCESSION   WP_258028932
VERSION     WP_258028932.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces fradiae
  ORGANISM  Streptomyces fradiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039604.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19380.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Streptomyces fradiae"
                     /db_xref="taxon:1906"
     Protein         <1..89
                     /product="DUF5955 family protein"
     Region          6..>66
                     /region_name="DUF5955"
                     /note="Family of unknown function (DUF5955); pfam19380"
                     /db_xref="CDD:437212"
ORIGIN      
        1 vhadggaeer arvgelirlv erlleehrae lpdqeaprve lrrlreelde gepepgvvrr
       61 algrlarfae pvapvaaava eltravggi
//
LOCUS       WP_258028965             285 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Streptomyces fradiae].
ACCESSION   WP_258028965
VERSION     WP_258028965.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces fradiae
  ORGANISM  Streptomyces fradiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 285)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 285)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 285)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 285)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Streptomyces fradiae"
                     /db_xref="taxon:1906"
     Protein         <1..285
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          1..274
                     /region_name="ProV"
                     /note="ABC-type proline/glycine betaine transport system,
                     ATPase component [Amino acid transport and metabolism];
                     COG4175"
                     /db_xref="CDD:443334"
ORIGIN      
        1 gsgkstlvrc ltrlieptsg tleidgddvl amdrarlrel rrrraamvfq hfgllphrsv
       61 ldnvayglei qgvgraerre raagfvakvg laglehrrpg qlsggqqqrv glaralavdp
      121 evllfdepfs aldplirrdm qeevvrlhre egrtmvfith dlgealrvgd rialmrdgrv
      181 vqlgtpeeiv gapaddyvrd fvrdvpreqv vtvrtamrpv taddaahgpa vppgatvaea
      241 itaaahggga pvrvvqdgrc lgvvdpqtll gvvagvaapg graaa
//
LOCUS       WP_258028986              85 aa            linear   BCT 02-MAR-2025
DEFINITION  lipoprotein, partial [Streptomyces fradiae].
ACCESSION   WP_258028986
VERSION     WP_258028986.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces fradiae
  ORGANISM  Streptomyces fradiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039509.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18966.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Streptomyces fradiae"
                     /db_xref="taxon:1906"
     Protein         <1..85
                     /product="lipoprotein"
     Region          <2..80
                     /region_name="Lipoprotein_23"
                     /note="Uncharacterized lipoprotein; pfam18966"
                     /db_xref="CDD:436872"
ORIGIN      
        1 vaqtapssav yrdvrvgadg avsatevtyv vtsallgerk pvralavatp rgpvvlelgg
       61 mdgeehmaml pawelakrsl taagg
//
LOCUS       WP_258029000             179 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein, partial [Pseudomonas
            protegens].
ACCESSION   WP_258029000
VERSION     WP_258029000.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas protegens
  ORGANISM  Pseudomonas protegens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Pseudomonas protegens"
                     /db_xref="taxon:380021"
     Protein         <1..179
                     /product="phosphopantetheine-binding protein"
     Region          <1..162
                     /region_name="PRK12316"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237054"
ORIGIN      
        1 lvayivpsea tptveaqaal rdslktalke hvpdymvpay llflealplt pngkldrkal
       61 pkvdaqqmqq vyvapqsele qqvaaiwadv lkldrvgmsd nffelgghsl lvaqvvtrvk
      121 qqfgvdmpik slfgaeslaa fvekvqalrq ttsslqdela kslealkrls pddlekiis
//
LOCUS       WP_258029030             403 aa            linear   BCT 02-MAR-2025
DEFINITION  VWA domain-containing protein, partial [Streptomyces fradiae].
ACCESSION   WP_258029030
VERSION     WP_258029030.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces fradiae
  ORGANISM  Streptomyces fradiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024909.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13519.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Streptomyces fradiae"
                     /db_xref="taxon:1906"
     Protein         1..>403
                     /product="VWA domain-containing protein"
     Region          <4..199
                     /region_name="YfbK"
                     /note="Secreted protein containing bacterial Ig-like
                     domain and vWFA domain [General function prediction only];
                     COG2304"
                     /db_xref="CDD:441879"
ORIGIN      
        1 maqvlvvdcs gsmtwpqekf raarqaaaaa irmlpagtrf avvqgtedat mvfpahegma
       61 vssagqrrra eaalqglpag ggtcigawld lagrllaaqd apighvlllt dgrnehdrtm
      121 pldavldtwe grfvcdawgi gdgwdagell rvarrlhgsv gavreeaalp geyekltarl
      181 ltktvpeltv evtpapgtai rylkqvfpte adlepggppg pdgayryttr awgdetrryh
      241 lcltadptgr prgedlqlaa vglarpaagp amaptavrlp ppracvvhwt edpalsrhtd
      301 tqvahfqlyg rfgqavaaaa aayrrgdrea aerhlgegvr lahavgatrp ladfrrladi
      361 edaaagrlrl rpdlapidfe hlitasshst ygpepddpap ppg
//
LOCUS       WP_258029031             159 aa            linear   BCT 02-MAR-2025
DEFINITION  GAF domain-containing protein, partial [Streptomyces fradiae].
ACCESSION   WP_258029031
VERSION     WP_258029031.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces fradiae
  ORGANISM  Streptomyces fradiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 159)
  AUTHORS   Hughes,J.
  TITLE     Phytochrome three-dimensional structures and functions
  JOURNAL   Biochem Soc Trans 38 (2), 710-716 (2010)
   PUBMED   20298248
REFERENCE   2  (residues 1 to 159)
  AUTHORS   Heikaus,C.C., Pandit,J. and Klevit,R.E.
  TITLE     Cyclic nucleotide binding GAF domains from phosphodiesterases:
            structural and mechanistic insights
  JOURNAL   Structure 17 (12), 1551-1557 (2009)
   PUBMED   20004158
REFERENCE   3  (residues 1 to 159)
  AUTHORS   Aravind,L. and Ponting,C.P.
  TITLE     The GAF domain: an evolutionary link between diverse
            phototransducing proteins
  JOURNAL   Trends Biochem Sci 22 (12), 458-459 (1997)
   PUBMED   9433123
REFERENCE   4  (residues 1 to 159)
  AUTHORS   Santero,E., Hoover,T.R., North,A.K., Berger,D.K., Porter,S.C. and
            Kustu,S.
  TITLE     Role of integration host factor in stimulating transcription from
            the sigma 54-dependent nifH promoter
  JOURNAL   J Mol Biol 227 (3), 602-620 (1992)
   PUBMED   1404379
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013736.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01590.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Streptomyces fradiae"
                     /db_xref="taxon:1906"
     Protein         1..>159
                     /product="GAF domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
ORIGIN      
        1 mrratglpva fggllderpr aplrigelsg tssevlrgla irpggglggr amalarpcav
       61 tdypearhis heydepvaae glrsvlavpv vvrrhvravl ygalrtpqpl gdrvldaava
      121 aardmeqalv vrdearrgad pvsgtggvrg pggaggmgg
//
LOCUS       WP_258029074             192 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein, partial [Staphylococcus
            aureus].
ACCESSION   WP_258029074
VERSION     WP_258029074.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>192
                     /product="extracellular solute-binding protein"
     Region          45..>192
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mskilkcitl avvmllivta cgpnrskedi dkalnkdnsk dkpnqltmwv dgdkqmafyk
       61 kitdqytkkt gikvklvnig qndqlenisl dapagkgpdi fflahdntgs aylqglaaei
      121 klskdelkgf nkqalkamny dnkqlalpai vettalfynk klvknapqtl eeveanaakl
      181 tdskkkqygm lf
//
LOCUS       WP_258029081              56 aa            linear   BCT 02-MAR-2025
DEFINITION  PIG-L family deacetylase, partial [Staphylococcus aureus].
ACCESSION   WP_258029081
VERSION     WP_258029081.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 56)
  AUTHORS   Handa,N., Terada,T., Kamewari,Y., Hamana,H., Tame,J.R., Park,S.Y.,
            Kinoshita,K., Ota,M., Nakamura,H., Kuramitsu,S., Shirouzu,M. and
            Yokoyama,S.
  TITLE     Crystal structure of the conserved protein TT1542 from Thermus
            thermophilus HB8
  JOURNAL   Protein Sci 12 (8), 1621-1632 (2003)
   PUBMED   12876312
REFERENCE   2  (residues 1 to 56)
  AUTHORS   Watanabe,R., Ohishi,K., Maeda,Y., Nakamura,N. and Kinoshita,T.
  TITLE     Mammalian PIG-L and its yeast homologue Gpi12p are
            N-acetylglucosaminylphosphatidylinositol de-N-acetylases essential
            in glycosylphosphatidylinositol biosynthesis
  JOURNAL   Biochem J 339 (Pt 1) (Pt 1), 185-192 (1999)
   PUBMED   10085243
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014625.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02585.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..56
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>56
                     /product="PIG-L family deacetylase"
     Region          5..>56
                     /region_name="PIG-L"
                     /note="GlcNAc-PI de-N-acetylase; cl00929"
                     /db_xref="CDD:445182"
ORIGIN      
        1 mtderhvlvi fphpddetfs sagtlanyiq kgipvtyacl tlgqmgrnlg nppfat
//
LOCUS       WP_258029097             247 aa            linear   BCT 02-MAR-2025
DEFINITION  E domain-containing protein, partial [Staphylococcus aureus].
ACCESSION   WP_258029097
VERSION     WP_258029097.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 247)
  AUTHORS   Gruszka,D.T., Wojdyla,J.A., Bingham,R.J., Turkenburg,J.P.,
            Manfield,I.W., Steward,A., Leech,A.P., Geoghegan,J.A., Foster,T.J.,
            Clarke,J. and Potts,J.R.
  TITLE     Staphylococcal biofilm-forming protein has a contiguous rod-like
            structure
  JOURNAL   Proc Natl Acad Sci U S A 109 (17), E1011-E1018 (2012)
   PUBMED   22493247
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028351.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17041.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..>247
                     /product="E domain-containing protein"
     Region          44..91
                     /region_name="SasG_E"
                     /note="E domain; pfam17041"
                     /db_xref="CDD:407216"
     Region          <78..>169
                     /region_name="YabE"
                     /note="Uncharacterized conserved protein YabE, contains G5
                     and tandem DUF348 domains [Function unknown]; COG3583"
                     /db_xref="CDD:442802"
     Region          172..219
                     /region_name="SasG_E"
                     /note="E domain; pfam17041"
                     /db_xref="CDD:407216"
ORIGIN      
        1 kgektittpt lknpltgeii skgeskeeit kdpineltey gpetitpghr defdpklptg
       61 ekeevpgkpg iknpetgdvv rppvdsvtky gpvkgdsive keeipfeker kfnpdlapgt
      121 ekvtregqkg ektittptlk npltgeiisk geskeeitkd pinelteygp etiapghrde
      181 fdpklptgek eevpgkpgik npetgevvrp pvdsvtkygp vkgdsiveke eipfekerkf
      241 npdlapg
//
LOCUS       WP_258029099              66 aa            linear   BCT 02-MAR-2025
DEFINITION  E domain-containing protein, partial [Staphylococcus aureus].
ACCESSION   WP_258029099
VERSION     WP_258029099.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 66)
  AUTHORS   Gruszka,D.T., Wojdyla,J.A., Bingham,R.J., Turkenburg,J.P.,
            Manfield,I.W., Steward,A., Leech,A.P., Geoghegan,J.A., Foster,T.J.,
            Clarke,J. and Potts,J.R.
  TITLE     Staphylococcal biofilm-forming protein has a contiguous rod-like
            structure
  JOURNAL   Proc Natl Acad Sci U S A 109 (17), E1011-E1018 (2012)
   PUBMED   22493247
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028351.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17041.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..>66
                     /product="E domain-containing protein"
ORIGIN      
        1 dpklptgeke evpgkpgikn petgdvvrpp vdsvtkygpv kgdsivekee ipfkkerkfn
       61 pdlapg
//
LOCUS       WP_258029108             330 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase, partial [Staphylococcus aureus].
ACCESSION   WP_258029108
VERSION     WP_258029108.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024867.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13476.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>330
                     /product="AAA family ATPase"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /GO_process="GO:0006302 - double-strand break repair
                     [Evidence IEA]"
     Region          1..>330
                     /region_name="sbcc"
                     /note="exonuclease SbcC; TIGR00618"
                     /db_xref="CDD:129705"
     Region          1..>161
                     /region_name="ABC_sbcCD"
                     /note="ATP-binding cassette domain of sbcCD; cd03279"
                     /db_xref="CDD:213246"
     Site            34..41
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213246"
     Site            150..153
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213246"
ORIGIN      
        1 mkplhlklnn fgpflkeeid fskidnnelf lisgktgsgk tmifdamtya lfgkasteqr
       61 eendlrshfa dgkqpmsvtf efqlnhriyk vhrqgpyike gnttktnakf dvfemvdgky
      121 eireskvisg tqfiiellgv nadqfrqlfi lpqgefkrfl isnsrekqgi lrtlfdsekf
      181 eaireilkee vkkekaqien ryqqidllwq eiesfdddni kgllevatqq idklienipl
      241 lqarskeila svnesketai kefeiiekkt lennilkdni nqlnknkidf vqlkeqqpei
      301 egieaklkll qditnllnyi enrekietki
//
LOCUS       WP_258029140              48 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Staphylococcus aureus].
ACCESSION   WP_258029140
VERSION     WP_258029140.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 48)
  AUTHORS   Yeo,C.C. and Poh,C.L.
  TITLE     Characterization of IS1474, an insertion sequence of the IS21
            family isolated from Pseudomonas alcaligenes NCIB 9867
  JOURNAL   FEMS Microbiol Lett 149 (2), 257-263 (1997)
   PUBMED   9141667
REFERENCE   2  (residues 1 to 48)
  AUTHORS   Solinas,F., Marconi,A.M., Ruzzi,M. and Zennaro,E.
  TITLE     Characterization and sequence of a novel insertion sequence,
            IS1162, from Pseudomonas fluorescens
  JOURNAL   Gene 155 (1), 77-82 (1995)
   PUBMED   7698671
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01695.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..48
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>48
                     /product="ATP-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <2..>48
                     /region_name="IS21_help_AAA"
                     /note="IS21-like element helper ATPase IstB; NF038214"
                     /db_xref="CDD:439516"
ORIGIN      
        1 mvflgssgvg kthlatgigm aaaknrvsty fikchhlien lrkaklen
//
LOCUS       WP_258029169             578 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase family protein, partial [Staphylococcus
            aureus].
ACCESSION   WP_258029169
VERSION     WP_258029169.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04851.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>578
                     /product="DEAD/DEAH box helicase family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
     Region          38..175
                     /region_name="PLDc_N_DEXD_b2"
                     /note="N-terminal putative catalytic domain of
                     uncharacterized prokaryotic and archeal HKD family
                     nucleases fused to a DEAD/DEAH box helicase domain;
                     cd09204"
                     /db_xref="CDD:197298"
     Site            order(117..122,135,137,139,147..151,153,155)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:197298"
     Site            order(119,121,137,139,150)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197298"
     Site            119
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197298"
     Region          152..>560
                     /region_name="SSL2"
                     /note="Superfamily II DNA or RNA helicase [Transcription,
                     Replication, recombination, and repair]; COG1061"
                     /db_xref="CDD:440681"
ORIGIN      
        1 msrllndfnq slhkgfidkh ishkgnytpk llvnnknekv lstiidelqk cetfyfsvaf
       61 itesglaslk aqlldlsnkg vkgkiltsny lgfnspkmyg ellklknvev rltdiagfha
      121 kgyifehkdy ssmvigssnl tsnalkvnye hnvllstmkn gdlvdsvkse fdllwqkstp
      181 lteqwinsyk esfeyrslek laeveqtqml ladkvkksve ivpnlmqaea lrslkairdk
      241 akdkaliisa tgtgktilca ldvrevnpnk flfivhnegi lnrakeefkk vlpikndsdf
      301 glltgkhrdv dakylfatiq tlsrddnfkq fdenefdyiv fdeahrsaas tyqrvfnyfk
      361 pkfmlgmtat persdelsif elfdyniaye irlqaalesd ilcpfhyfgv tdyvhqgike
      421 ddvtklrylt sdervnyiiq ktdyygysge ilqglifvss kkeaydladk lsskgiksva
      481 ltgddsvnyr qivieklkeg kinyiitvdl fnegidipev nqvvmlrpte ssiifiqqlg
      541 rglrkssnke yvtvidfign yktnylipia lsgdqsqn
//
LOCUS       WP_258029181             241 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1828 domain-containing protein, partial [Staphylococcus aureus].
ACCESSION   WP_258029181
VERSION     WP_258029181.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020436.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08861.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..241
                     /product="DUF1828 domain-containing protein"
     Region          13..104
                     /region_name="DUF1828"
                     /note="Domain of unknown function DUF1828; pfam08861"
                     /db_xref="CDD:430268"
     Region          145..231
                     /region_name="DUF1829"
                     /note="Domain of unknown function DUF1829; pfam08862"
                     /db_xref="CDD:462620"
ORIGIN      
        1 fiplenetie fyspivdyfg dsisvnisfs gdrykltdhg etlwnmeqlg idltsnkkqk
       61 kyqllnnivq nyslvienkh infytnrinl sqaihdyvla iseisylgil kkenikslfk
      121 devmqyflsn rkiypnifpe fkvegkskli hsfeavfpge ateyvktikr idknnaknvl
      181 fdwndveihr nknfdsnarl niiteqqddi seavstmlsq ynvevfsfen kkqleekfsn
      241 v
//
LOCUS       WP_258029192             268 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein,
            partial [Staphylococcus aureus].
ACCESSION   WP_258029192
VERSION     WP_258029192.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 268)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..268
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
     Region          43..265
                     /region_name="YbxI"
                     /note="Beta-lactamase class D [Defense mechanisms];
                     COG2602"
                     /db_xref="CDD:442014"
ORIGIN      
        1 tffimiiqsq flmgqsltdy nykkplqsdy qildesknfg snsgsfvmys mkkdkyyiyn
       61 ekesrkrysp dstykiylal fgldrhiisd knsrmswnhn hypfdswnkd qdlntaiqns
      121 vnwyferisn qlsknytsdq lkqlnygnkn lgsykaywle dslkisnleq vivlknmmeq
      181 nnhfsknekk qlsssllirk nenyelygkt gtgivngkyn ngwfvgyvit nhdkyyfsth
      241 lsdekasgen aklinekilk emgvlngq
//
LOCUS       WP_258029201              76 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF420 domain-containing protein, partial [Staphylococcus aureus].
ACCESSION   WP_258029201
VERSION     WP_258029201.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016153.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04238.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..76
                     /product="DUF420 domain-containing protein"
     Region          <1..63
                     /region_name="DUF420"
                     /note="Protein of unknown function (DUF420); cl00989"
                     /db_xref="CDD:470021"
ORIGIN      
        1 iflffhinla tiggilglvq iitafkdkyn vhrkfgpfas viwfctaitg vavylllyvl
       61 ypggettsli katfgh
//
LOCUS       WP_258029249             277 aa            linear   BCT 02-MAR-2025
DEFINITION  PAS domain-containing protein, partial [Staphylococcus aureus].
ACCESSION   WP_258029249
VERSION     WP_258029249.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 277)
  AUTHORS   Taylor,B.L. and Zhulin,I.B.
  TITLE     PAS domains: internal sensors of oxygen, redox potential, and light
  JOURNAL   Microbiol Mol Biol Rev 63 (2), 479-506 (1999)
   PUBMED   10357859
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024586.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13188.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>277
                     /product="PAS domain-containing protein"
     Region          147..>249
                     /region_name="NtrY"
                     /note="Signal transduction histidine kinase NtrY involved
                     in nitrogen fixation and metabolism regulation [Signal
                     transduction mechanisms]; COG5000"
                     /db_xref="CDD:444024"
ORIGIN      
        1 mkfhhrlmll issiliisfv tlgiiihasi tyvlsekheq alatdarsyi ylvqdneidk
       61 vkeivkqqni dllitkhdkk vfssgklkai pnsdsyiqkr dvfifnkkvn gyhvwikgyn
      121 nditemhwtl wkyliltclv vllclyfasr sfkrtlirpi qevtyatqll angyyhirvp
      181 esnvvetkal fvstndlarr lqklnneqki qsnrlkttie nipsailmid rngkivvank
      241 ayyeqfnish nieqvgyhgy vnteieqlil esfkvek
//
LOCUS       WP_258029266             148 aa            linear   BCT 02-MAR-2025
DEFINITION  YpiB family protein, partial [Staphylococcus aureus].
ACCESSION   WP_258029266
VERSION     WP_258029266.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020439.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08864.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..148
                     /product="YpiB family protein"
     Region          <1..133
                     /region_name="YpiB"
                     /note="Uncharacterized conserved protein YpiB, UPF0302
                     family [Function unknown]; COG5582"
                     /db_xref="CDD:444321"
ORIGIN      
        1 ihfvdtkinh hetleiaevg shasaiqftn rniklmntne ifdyianhnc afdiqihfan
       61 vskreqrldd livaqltesp syqtylhdln smaidrhkha llidyllhni dlslqmnekq
      121 rfyqltqiln tlklvnkhnq fedladdd
//
LOCUS       WP_258029269              39 aa            linear   BCT 02-MAR-2025
DEFINITION  YpiB family protein, partial [Staphylococcus aureus].
ACCESSION   WP_258029269
VERSION     WP_258029269.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020439.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08864.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..39
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>39
                     /product="YpiB family protein"
     Region          2..>39
                     /region_name="YpiB"
                     /note="Uncharacterized conserved protein YpiB, UPF0302
                     family [Function unknown]; COG5582"
                     /db_xref="CDD:444321"
ORIGIN      
        1 msetlnqike sfieyllfqy rfksriavwv lnyikvnea
//
LOCUS       WP_258029312              29 aa            linear   BCT 02-MAR-2025
DEFINITION  translation initiation factor IF-2 N-terminal domain-containing
            protein, partial [Staphylococcus aureus].
ACCESSION   WP_258029312
VERSION     WP_258029312.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 29)
  AUTHORS   Laursen,B.S., Mortensen,K.K., Sperling-Petersen,H.U. and
            Hoffman,D.W.
  TITLE     A conserved structural motif at the N terminus of bacterial
            translation initiation factor IF2
  JOURNAL   J Biol Chem 278 (18), 16320-16328 (2003)
   PUBMED   12600987
REFERENCE   2  (residues 1 to 29)
  AUTHORS   Nyengaard,N.R., Mortensen,K.K., Lassen,S.F., Hershey,J.W. and
            Sperling-Petersen,H.U.
  TITLE     Tandem translation of E. coli initiation factor IF2 beta:
            purification and characterization in vitro of two active forms
  JOURNAL   Biochem Biophys Res Commun 181 (3), 1572-1579 (1991)
   PUBMED   1764105
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016635.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04760.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..29
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>29
                     /product="translation initiation factor IF-2 N-terminal
                     domain-containing protein"
     Region          1..>29
                     /region_name="IF2_N"
                     /note="Translation initiation factor IF-2, N-terminal
                     region; pfam04760"
                     /db_xref="CDD:428110"
ORIGIN      
        1 mskqriyeya kelnlkskei idelksmni
//
LOCUS       WP_258029323             163 aa            linear   BCT 02-MAR-2025
DEFINITION  fimbrial protein [Serratia marcescens].
ACCESSION   WP_258029323
VERSION     WP_258029323.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012635.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00419.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         1..163
                     /product="fimbrial protein"
                     /GO_component="GO:0009289 - pilus [Evidence IEA]"
                     /GO_process="GO:0007155 - cell adhesion [Evidence IEA]"
                     /calculated_mol_wt=17309
     Region          4..163
                     /region_name="Fimbrial"
                     /note="Fimbrial protein; cl01416"
                     /db_xref="CDD:445401"
ORIGIN      
        1 mdslkkitpa avalllgama lpaesastvt vsvtvlaplp cvineskpit vdfgddvmtt
       61 ridgnnyrvp veygltcsst pvrnemrlqi ageagfdsrv lktnvkglgi allrdgvrmp
      121 lnswqnftyp vlprleavpv kqsgsglptg eftssatlrv dyq
//
LOCUS       WP_258029332             335 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase, partial [Staphylococcus aureus].
ACCESSION   WP_258029332
VERSION     WP_258029332.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024573.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13175.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>335
                     /product="AAA family ATPase"
     Region          12..327
                     /region_name="AAA_15"
                     /note="AAA ATPase domain; pfam13175"
                     /db_xref="CDD:433011"
     Region          12..>95
                     /region_name="YbjD"
                     /note="Predicted ATP-dependent endonuclease of the OLD
                     family, contains P-loop ATPase and TOPRIM domains
                     [Replication, recombination and repair]; COG3593"
                     /db_xref="CDD:442812"
ORIGIN      
        1 mtdflenwrk kmyissvkik nfrnfdnidi dfhegvnvli ghnnsgksnl lralslifdg
       61 svrkqlsved fnnsltkesl kkeapkivis vhitqsener lmsdelitvs nwltkleepy
      121 eariqyeffl pkdeeknyid lvknidekee iwnlirsqfi rlyvnkiwvg npehqipidn
      181 dslnkfdfqf ldairdverd mfsgkntllk svidffidyd iksdetitee eqkekleerr
      241 kefsdnssdl ietihkrlds gnqkilsytn gigasydkst pdfkgnltes eiytvlqlii
      301 khetgmtlpi thnglgynnl ifmalllskm qadsd
//
LOCUS       WP_258029353             330 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Serratia marcescens].
ACCESSION   WP_258029353
VERSION     WP_258029353.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 330)
  AUTHORS   Mande,S.S., Sarfaty,S., Allen,M.D., Perham,R.N. and Hol,W.G.
  TITLE     Protein-protein interactions in the pyruvate dehydrogenase
            multienzyme complex: dihydrolipoamide dehydrogenase complexed with
            the binding domain of dihydrolipoamide acetyltransferase
  JOURNAL   Structure 4 (3), 277-286 (1996)
   PUBMED   8805537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07992.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         1..330
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=35567
     Region          30..>259
                     /region_name="FadH2"
                     /note="NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur
                     reductase, or a related oxidoreductase [Lipid transport
                     and metabolism]; COG0446"
                     /db_xref="CDD:440215"
ORIGIN      
        1 mkteyqvaiv gagpagiaaa talrqagied vvilereqqa ggvprhcrhp tfglqtfyrp
       61 mlgstyvdki laragqveir tgvtvlaikp dgeltitdrr gvstlkaqrv ilatgvretp
      121 rhprlvsglr pqgvltagal qqfvylrglq pgkapvvvgt elvsfsalwt lrnagvrava
      181 miesggrpva wrlsalyarl mgvpihyysr vtdiagrdrv esievenrqg ekrriacdsl
      241 iftgrftgey tlirqshlaq rpesgcpltd qaavptppis psatcctrrt watsvirkgc
      301 asakplpvrc sarcrrrgks srcgmtsgsa
//
LOCUS       WP_258029355             183 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Serratia
            marcescens].
ACCESSION   WP_258029355
VERSION     WP_258029355.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 183)
  AUTHORS   Koropatkin,N.M., Pakrasi,H.B. and Smith,T.J.
  TITLE     Atomic structure of a nitrate-binding protein crucial for
            photosynthetic productivity
  JOURNAL   Proc Natl Acad Sci U S A 103 (26), 9820-9825 (2006)
   PUBMED   16777960
REFERENCE   2  (residues 1 to 183)
  AUTHORS   Maeda,S., Price,G.D., Badger,M.R., Enomoto,C. and Omata,T.
  TITLE     Bicarbonate binding activity of the CmpA protein of the
            cyanobacterium Synechococcus sp. strain PCC 7942 involved in active
            transport of bicarbonate
  JOURNAL   J Biol Chem 275 (27), 20551-20555 (2000)
   PUBMED   10779519
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13379.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         <1..183
                     /product="ABC transporter substrate-binding protein"
     Region          <1..168
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 lnkgsdvnyl lvsaleqagl sykditpvyl ppsdaraafq rgsvdawviw dpyyaevetr
       61 anarllkdae glvphytfyl asrrfaetyp dsakqviqql galsdwaneh pqeaaailaq
      121 stgldqaiwa raiarmpfgs qrmspevfrq qqqladkfta igllpvkvdv naarwsedkp
      181 eap
//
LOCUS       WP_258029205             117 aa            linear   BCT 02-MAR-2025
DEFINITION  protein-export chaperone SecB, partial [Staphylococcus aureus].
ACCESSION   WP_258029205
VERSION     WP_258029205.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 117)
  AUTHORS   Kumamoto,C.A. and Nault,A.K.
  TITLE     Characterization of the Escherichia coli protein-export gene secB
  JOURNAL   Gene 75 (1), 167-175 (1989)
   PUBMED   2656409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014599.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02556.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..117
                     /product="protein-export chaperone SecB"
                     /GO_function="GO:0051082 - unfolded protein binding
                     [Evidence IEA]"
                     /GO_process="GO:0015031 - protein transport [Evidence
                     IEA]"
                     /GO_process="GO:0051262 - protein tetramerization
                     [Evidence IEA]"
     Region          <34..105
                     /region_name="Translocase_SecB"
                     /note="Preprotein translocase subunit SecB. SecB is a
                     cytoplasmic component of the multisubunit membrane-bound
                     enzyme termed Sec protein translocase, which is the main
                     constituent of the General Secretory (type II) Pathway
                     involved in translocation of nascent...; cl00251"
                     /db_xref="CDD:469688"
     Site            order(35,37,39,41)
                     /site_type="active"
                     /note="Preprotein binding site [active]"
                     /db_xref="CDD:238312"
ORIGIN      
        1 fevnsdfsak vafeneeayi imdcqignnk pncpfiinmq ltgvfdieye ndvedknslk
       61 illtqnaiai lypyirslvs dltskanmfd tfimpvvnva kmmeennrie ivgldkk
//
LOCUS       WP_258029083             170 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein,
            partial [Staphylococcus aureus].
ACCESSION   WP_258029083
VERSION     WP_258029083.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 170)
  AUTHORS   Bourdineaud,J.P., Nehme,B., Tesse,S. and Lonvaud-Funel,A.
  TITLE     The ftsH gene of the wine bacterium Oenococcus oeni is involved in
            protection against environmental stress
  JOURNAL   Appl Environ Microbiol 69 (5), 2512-2520 (2003)
   PUBMED   12732516
REFERENCE   2  (residues 1 to 170)
  AUTHORS   Herman,C., Prakash,S., Lu,C.Z., Matouschek,A. and Gross,C.A.
  TITLE     Lack of a robust unfoldase activity confers a unique level of
            substrate specificity to the universal AAA protease FtsH
  JOURNAL   Mol Cell 11 (3), 659-669 (2003)
   PUBMED   12667449
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018218.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06480.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>170
                     /product="ATP-dependent metallopeptidase FtsH/Yme1/Tma
                     family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0004176 - ATP-dependent peptidase
                     activity [Evidence IEA]"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
     Region          19..>170
                     /region_name="HflB"
                     /note="ATP-dependent Zn proteases [Posttranslational
                     modification, protein turnover, chaperones]; COG0465"
                     /db_xref="CDD:440233"
ORIGIN      
        1 mqkafrnvlv iviigviifg lfsylngngn mpkqltynqf teklekgdlk tleiqpqqnv
       61 ymvsgktknd edysstilyn nekelqkitd aakkqngvkl tikeeekqsv fvsilstlip
      121 vvviallfif flsqaqgggs ggrmmnfgks kakmydnnkr rvrfsdvaga
//
LOCUS       WP_258029371              63 aa            linear   BCT 02-MAR-2025
DEFINITION  putative HNHc nuclease, partial [Staphylococcus aureus].
ACCESSION   WP_258029371
VERSION     WP_258029371.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028094.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16784.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..63
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..63
                     /product="putative HNHc nuclease"
     Region          <1..60
                     /region_name="HNHc_6"
                     /note="Putative HNHc nuclease; pfam16784"
                     /db_xref="CDD:293389"
ORIGIN      
        1 vgrgmnrnkm nhydkhvlal crehhneqha igvksfddky hlhdswikvd erlnkmlkge
       61 kke
//
LOCUS       WP_258029373             133 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein,
            partial [Staphylococcus aureus].
ACCESSION   WP_258029373
VERSION     WP_258029373.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 133)
  AUTHORS   Bourdineaud,J.P., Nehme,B., Tesse,S. and Lonvaud-Funel,A.
  TITLE     The ftsH gene of the wine bacterium Oenococcus oeni is involved in
            protection against environmental stress
  JOURNAL   Appl Environ Microbiol 69 (5), 2512-2520 (2003)
   PUBMED   12732516
REFERENCE   2  (residues 1 to 133)
  AUTHORS   Herman,C., Prakash,S., Lu,C.Z., Matouschek,A. and Gross,C.A.
  TITLE     Lack of a robust unfoldase activity confers a unique level of
            substrate specificity to the universal AAA protease FtsH
  JOURNAL   Mol Cell 11 (3), 659-669 (2003)
   PUBMED   12667449
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018218.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06480.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>133
                     /product="ATP-dependent metallopeptidase FtsH/Yme1/Tma
                     family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0004176 - ATP-dependent peptidase
                     activity [Evidence IEA]"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
     Region          21..96
                     /region_name="FtsH_ext"
                     /note="FtsH Extracellular; pfam06480"
                     /db_xref="CDD:377663"
ORIGIN      
        1 mqkafrnvlv iviigviifg lfsylngngn mpkqltynqf teklekgdlk tleiqpqqnv
       61 ymvsgktknd edysstilyn nekelqkitd aakkqngvkl tikeeekqsv fvsilstlip
      121 vvviallfif fls
//
LOCUS       WP_258029390             175 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Staphylococcus aureus].
ACCESSION   WP_258029390
VERSION     WP_258029390.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13751.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..>175
                     /product="transposase"
     Region          <1..175
                     /region_name="transpos_IS1182"
                     /note="IS1182 family transposase; NF033551"
                     /db_xref="CDD:468080"
ORIGIN      
        1 tdtrtlipfl tmiqntfgyl peyivadagy gseqnymaii ddfnktplit ygmfikdktr
       61 kfksdifntq nwkydelnde ficpnnkrig fkryayrndr ygfkrdfkly ecddcsscsl
      121 rhqcmkpnsk snkkimknyn weyfkvqinq klsepetkki ysqrkidvep vfgfm
//
LOCUS       WP_258029396              60 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase, partial [Serratia
            marcescens].
ACCESSION   WP_258029396
VERSION     WP_258029396.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 60)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 60)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..60
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         1..>60
                     /product="SDR family NAD(P)-dependent oxidoreductase"
     Region          1..>59
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 msrifitgsv dglgraaaqt lleeghqvil harapgrlea vrdlldqgaq avigdlsevq
//
LOCUS       WP_258029408             228 aa            linear   BCT 02-MAR-2025
DEFINITION  chloride channel protein, partial [Serratia marcescens].
ACCESSION   WP_258029408
VERSION     WP_258029408.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 228)
  AUTHORS   Mindell,J.A. and Maduke,M.
  TITLE     ClC chloride channels
  JOURNAL   Genome Biol 2 (2), REVIEWS3003 (2001)
   PUBMED   11182894
REFERENCE   2  (residues 1 to 228)
  AUTHORS   Schmidt-Rose,T. and Jentsch,T.J.
  TITLE     Reconstitution of functional voltage-gated chloride channels from
            complementary fragments of CLC-1
  JOURNAL   J Biol Chem 272 (33), 20515-20521 (1997)
   PUBMED   9252364
REFERENCE   3  (residues 1 to 228)
  AUTHORS   Zhang,J., George,A.L. Jr., Griggs,R.C., Fouad,G.T., Roberts,J.,
            Kwiecinski,H., Connolly,A.M. and Ptacek,L.J.
  TITLE     Mutations in the human skeletal muscle chloride channel gene
            (CLCN1) associated with dominant and recessive myotonia congenita
  JOURNAL   Neurology 47 (4), 993-998 (1996)
   PUBMED   8857733
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012861.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00654.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         1..>228
                     /product="chloride channel protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA]"
                     /GO_process="GO:0006821 - chloride transport [Evidence
                     IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          13..>226
                     /region_name="Voltage_gated_ClC"
                     /note="CLC voltage-gated chloride channel. The ClC
                     chloride channels catalyse the selective flow of Cl- ions
                     across cell membranes, thereby regulating electrical
                     excitation in skeletal muscle and the flow of salt and
                     water across epithelial barriers. This...; cl02915"
                     /db_xref="CDD:445960"
     Site            133
                     /site_type="active"
                     /note="pore gating glutamate residue [active]"
                     /db_xref="CDD:238233"
ORIGIN      
        1 mkrlvhlhhy rallrslfia vfigvaaala vwlfhrsmig lewlllgnad gslvaaaaal
       61 pgwrraltpa lgglaaglll yvhqryrhqr paaptdymea ietgngkldt gaslvkclas
      121 llvvssgsai gregamilla alvgslfaqr fthekewklw vacaaaagma sayhaplags
      181 lfiaeilfgt lmlaslgpvv iaavsallmt nllnggqapl ylvtplaa
//
LOCUS       WP_258029418             119 aa            linear   BCT 02-MAR-2025
DEFINITION  abortive infection system antitoxin AbiGi family protein, partial
            [Serratia marcescens].
ACCESSION   WP_258029418
VERSION     WP_258029418.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 119)
  AUTHORS   Tangney,M. and Fitzgerald,G.F.
  TITLE     Effectiveness of the lactococcal abortive infection systems AbiA,
            AbiE, AbiF and AbiG against P335 type phages
  JOURNAL   FEMS Microbiol Lett 210 (1), 67-72 (2002)
   PUBMED   12023079
REFERENCE   2  (residues 1 to 119)
  AUTHORS   O'Connor,L., Tangney,M. and Fitzgerald,G.F.
  TITLE     Expression, regulation, and mode of action of the AbiG abortive
            infection system of lactococcus lactis subsp. cremoris UC653
  JOURNAL   Appl Environ Microbiol 65 (1), 330-335 (1999)
   PUBMED   9872803
REFERENCE   3  (residues 1 to 119)
  AUTHORS   O'Connor,L., Coffey,A., Daly,C. and Fitzgerald,G.F.
  TITLE     AbiG, a genotypically novel abortive infection mechanism encoded by
            plasmid pCI750 of Lactococcus lactis subsp. cremoris UC653
  JOURNAL   Appl Environ Microbiol 62 (9), 3075-3082 (1996)
   PUBMED   8795193
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022354.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10899.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         <1..119
                     /product="abortive infection system antitoxin AbiGi family
                     protein"
     Region          <4..82
                     /region_name="AbiGi"
                     /note="Putative abortive phage resistance protein AbiGi,
                     antitoxin; pfam10899"
                     /db_xref="CDD:431530"
ORIGIN      
        1 plrymknyqg tlrrrqapev rnyifadere wrfvpdihqs kgkayiaskd gmrqvngker
       61 yneqykdvrl gflmsdiryi ivrnesdvpr midflsekig dkntlltril steligndm
//
LOCUS       WP_258029419             242 aa            linear   BCT 02-MAR-2025
DEFINITION  PTS transporter subunit EIIC, partial [Serratia marcescens].
ACCESSION   WP_258029419
VERSION     WP_258029419.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 242)
  AUTHORS   Reizer,J., Paulsen,I.T., Reizer,A., Titgemeyer,F. and Saier,M.H.
            Jr.
  TITLE     Novel phosphotransferase system genes revealed by bacterial genome
            analysis: the complete complement of pts genes in mycoplasma
            genitalium
  JOURNAL   Microb Comp Genomics 1 (3), 151-164 (1996)
   PUBMED   9689210
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02378.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         <1..242
                     /product="PTS transporter subunit EIIC"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
     Region          <1..228
                     /region_name="PRK09796"
                     /note="PTS system cellobiose/arbutin/salicin-specific
                     transporter subunits IIBC; Provisional"
                     /db_xref="CDD:182081"
ORIGIN      
        1 dritpavtkn flkpmlivli aapiaillig plgiwigsgi salvytvhgy lgwlsvaimg
       61 aiwpllvitg mhrvftptii qtiaetgkeg mvmpseigan lslggaslav alktknrelr
      121 qtalaaaasa ivagisepal ygvavrlkrp liaslisgfv cgavagiggl ashsmaspgl
      181 ftsvqffdpa npmsivwvaa vmalsvvlsf altlmlgfed lpenaaapgq tapaanaasa
      241 th
//
LOCUS       WP_258029426             251 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Serratia marcescens].
ACCESSION   WP_258029426
VERSION     WP_258029426.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         1..>251
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          19..>251
                     /region_name="NarK"
                     /note="Nitrate/nitrite transporter NarK [Inorganic ion
                     transport and metabolism]; COG2223"
                     /db_xref="CDD:441825"
ORIGIN      
        1 mraffllcvs raglclgtmm fagalptirs ewqldaasag mvqtvfsltn alallvasww
       61 cdslgarrvy llfswlgaaa lmlfavfahs ylgamvlmaf vgltqggayt palllamgmn
      121 gparrgyaig mvlaasslgy flsvfiagws amrwgagvaf slcaagallg alagslalvg
      181 yrepqprtlg rktkresyai tyatllllig yiahswellg nwawapslvs ealsgfsldp
      241 lsaglivaav i
//
LOCUS       WP_258029496             272 aa            linear   BCT 02-MAR-2025
DEFINITION  SulP family inorganic anion transporter, partial [Salmonella
            enterica].
ACCESSION   WP_258029496
VERSION     WP_258029496.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00916.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         1..>272
                     /product="SulP family inorganic anion transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:1902358 - sulfate transmembrane transport
                     [Evidence IEA]"
     Region          1..>272
                     /region_name="PRK11660"
                     /note="putative transporter; Provisional; cl46980"
                     /db_xref="CDD:481320"
ORIGIN      
        1 mnklfsshvm pfralidacw kekytasrft rdviagitvg iiaiplamal aigsgvapqy
       61 glytsavagi vialtggsrf svsgptaafv vilypvsqqf glagllvatl msgfflilfg
      121 larlgrliey ipvsvtlgft sgigitigtm qikdflglqm ahvpehylqk vgalfmalpt
      181 vnigdaaigv vtlgtlifwp rlgirlpghl pallagcavm givnllggnv atigsqfhyv
      241 ladgtqgngi pqllpqlmlp wslpgsdftl sw
//
LOCUS       WP_258029527            1951 aa            linear   BCT 02-MAR-2025
DEFINITION  YadA-like family protein, partial [Burkholderia pseudomallei].
ACCESSION   WP_258029527
VERSION     WP_258029527.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 1951)
  AUTHORS   Sandt,C.H. and Hill,C.W.
  TITLE     Nonimmune binding of human immunoglobulin A (IgA) and IgG Fc by
            distinct sequence segments of the EibF cell surface protein of
            Escherichia coli
  JOURNAL   Infect Immun 69 (12), 7293-7303 (2001)
   PUBMED   11705900
REFERENCE   2  (residues 1 to 1951)
  AUTHORS   Hoiczyk,E., Roggenkamp,A., Reichenbecher,M., Lupas,A. and
            Heesemann,J.
  TITLE     Structure and sequence analysis of Yersinia YadA and Moraxella
            UspAs reveal a novel class of adhesins
  JOURNAL   EMBO J 19 (22), 5989-5999 (2000)
   PUBMED   11080146
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015831.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03895.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..1951
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..1951
                     /product="YadA-like family protein"
     Region          85..1779
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          1820..1861
                     /region_name="YadA_stalk"
                     /note="Coiled stalk of trimeric autotransporter adhesin;
                     pfam05662"
                     /db_xref="CDD:428572"
     Region          1892..1950
                     /region_name="YadA_anchor"
                     /note="YadA-like membrane anchor domain; pfam03895"
                     /db_xref="CDD:427576"
ORIGIN      
        1 vaslssglss tnssltslst sassgistaq sgvnslstgl stanstvasl stststglss
       61 atssiaslst ststgigsls tglsttnsnv aslssglsst nssltslsts assgistaqs
      121 gvnslstgls tanstvasls tststglssa tssiaslsts tstgigslst glstvatttn
      181 nlgsstaaal gggatynpat gtisapsytt ynangtttan tsvgsaidsi nangikyfha
      241 nstgpdsvat gadavaigtg ataatansva lgansvtaaa vptssatvgs ttlgtfagsa
      301 pvgvvsvgap gaerqitnva agqvtasstd aingsqlyav askldsasss isslstglss
      361 atssitslst ststglssan ssiaslstst stgigslstg lsttdsavas lstststgls
      421 sanssiasls tststgigsl stglsttnsn vaslststst glssatssia slstststgi
      481 gslstglstt nstvaslsts tstglssans siaslststs tgigslstgl sttnsnvasl
      541 ssglsstnss ltslstsass gistaqsgvn slstglsttn stvaslstst stglssatss
      601 iaslststst gigslstgls ttdstvasls tststglssa tssiaslsts tstgigslst
      661 glsttnsnva slssglsstn ssltslstsa ssgistaqsg vnslstglst anstvaslst
      721 ststglssan ssiaslstst stgigslstg lsttdstvas lstststgls sanssiasls
      781 tststgigsl stglsttnsn vaslststst glssanssia slstststgi gslstglstt
      841 nsnvaslsts tstglnlans siaslststs tsidslstgl sttnsnvasl stststglss
      901 anssiaslst ststgigsls tglsttnsnv aslstststg lnlanssias lstststgig
      961 slstglsttn snvaslstst stglssatss iaslststst gigslstgls ttdstvasls
     1021 tststglssa nssiaslsts tstgigslst glsttdstva slstststgl ssatssitsl
     1081 stststgigs lstglsttns nvaslststs tglssatssi aslstststg igslstglst
     1141 tnsnvaslst ststglssat ssiaslstst stgigslstg lsttdstvas lstststgls
     1201 satssiasls tststgigsl stglsttnst vaslststst glssatssia slstststgi
     1261 gslstglstt dstvaslsts tstglssats siaslststs tgigslstgl sttnstvasl
     1321 stststglss atssiaslst ststgigsls tglsttnstv aslstststg igslstglst
     1381 tnstvaslst ststgigsls tglsstnsnl vslstsastg igslstsidt tnsnlaslst
     1441 ssstgigsls tsinatnsnl aslstsastg igslstsiss ittnttnlgn staaalggga
     1501 tydpatgais apsyttynan gttatntsvg aaidninang ikyfhanstd pdsvatgtns
     1561 vaigpnavan vdysvaigsg attsaavpva sasvggltfg gfagsapigv fsvgapgaer
     1621 qitnvaagri saastdavng sqlyatnsnv aslstglnat nsnlaslsts tstavgslst
     1681 glsttnstva slstststsi gslstglsta nsnlaslsts tstgigslst glattnsnva
     1741 slstsvtnin tqltslstsi tnnvirslpa stgvaadmsa pkatspsvta gsnsvalgag
     1801 sndggrsnvv svgsdtqqrq itnvaagteg tdavnvnqln tlstsmsqsl snqqtqlnnl
     1861 gsqlnqtqqq lqqtdtmarq giaavaamas iphmdrdsnf amgvgtssfl gqkaiavgmq
     1921 aritenlkas lnggfagnqk vigagmlyqw k
//
LOCUS       WP_258029525             551 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258029525
VERSION     WP_258029525.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 551)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>551
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          65..486
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
     Region          522..>551
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
ORIGIN      
        1 mharafhsvi spyhirlplr ririireyvn ttqeygvmtd mldsseisvr ddidpvpgaa
       61 pervlaltag qygiwldqml npdlpcyilg ailridgtfd ealltsvvne vvnandslra
      121 mlvseggsvr qrvlsdvele iahidfsgsa hphdsawrym rtafdtafal dgllcdfriv
      181 respsrtywm yrchhlvadg qsvsmicrmi vdlynrrasa dmarieptps yfdsldddrk
      241 yaessryerd aqfwqdkfss lpppllssrs seaaarpasf pdgqvnltie rakydrlgri
      301 aeasgctivh vmfgvlalyf srafqvdevv igmpvhnrst aqqkraigmf asvvpiripv
      361 dgnerfvsll ngvsaelrhc yrhqrfpiae lnrrlglvrt grrqlfdltl sfekfpldfy
      421 igevklglts mrhrfeqtpi tvnvqdyhed qdlvmqfnyd vnafshaevd nigtriggll
      481 daliehhddm pvgmlpllde aerkqvvyaw naterdypie qcihqlfeaq vdrkpeaial
      541 tfdgqrlgya e
//
LOCUS       WP_258029538             229 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258029538
VERSION     WP_258029538.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..>229
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..>229
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation (C) domain of non-ribosomal
                     peptide synthetases(NRPSs) and similar domains including
                     the C-domain of SgcC5, a free-standing NRPS with both
                     ester- and amide- bond forming activity; cd19531"
                     /db_xref="CDD:380454"
ORIGIN      
        1 ralnrivmrh ealrtcfvre egepiqviqp hadltvsyhd lreaesirhe agnreqrakd
       61 lsqahasapf dlsrdlpvrv lllqladeah vvqvvmhhia sdgwsvgvfl qelsalygsf
      121 iaeqgdplap lplqyadyaa wqrrwlasgq lekqgafwqt nlsgaptlle lptdrprppk
      181 qshagasiev klgaalserv krlsqrhgvt pymtllsswa avlsrlsgq
//
LOCUS       WP_258029475             327 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258029475
VERSION     WP_258029475.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 327)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..>327
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..277
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation (C) domain of non-ribosomal
                     peptide synthetases(NRPSs) and similar domains including
                     the C-domain of SgcC5, a free-standing NRPS with both
                     ester- and amide- bond forming activity; cd19531"
                     /db_xref="CDD:380454"
ORIGIN      
        1 salygsfiae qgdplaplpl qyadyaawqr rwlasgqlek qgafwqtnls gaptllelpt
       61 drprppkqsh agasvevklg aalservkrl sqrhgvtpym tllsswaavl srlsgqeevv
      121 igspvagrnr tevealigff vntlalrldl sseptvgell krtkaqvlsa qahqdlpfdq
      181 vvervkpprs tahpplfqvm fvwqnmpage ltipgltira vetplqtaqf eltlslreag
      241 ddivghlnya salfdestvr ryvtywrrll egmtagpanv svarlpllde aerkqvvyaw
      301 naterdypie qcihqlfeaq vdrkpea
//
LOCUS       WP_258029470             335 aa            linear   BCT 02-MAR-2025
DEFINITION  PhoPQ-activated protein PqaA family protein, partial [Salmonella
            enterica].
ACCESSION   WP_258029470
VERSION     WP_258029470.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 335)
  AUTHORS   Garcia-Calderon,C.B., Casadesus,J. and Ramos-Morales,F.
  TITLE     Rcs and PhoPQ regulatory overlap in the control of Salmonella
            enterica virulence
  JOURNAL   J Bacteriol 189 (18), 6635-6644 (2007)
   PUBMED   17616593
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021645.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10142.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         1..>335
                     /product="PhoPQ-activated protein PqaA family protein"
     Region          63..>335
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 mfkrylwklc wlafalvtrg esmkkiylvv ivlffistkv ytllhnniff crnspecdls
       61 hvlpdyreqi sdtplkytli staplaqvvv rhyellsqhw spddmvtpaq wrhnvdiyip
      121 etakehhalv vvnnginyek giqipskpvd ftqqtlasia rdtntivisv sdipnqyltf
      181 qddkkplked esvsrswalf meapeqrklm plnipmvtai sqamrlakke ltqwninsfi
      241 itgiskrgwt twlsaiadpd veaivpfaid lldidasleh iyqsyggnwp itfypyyqqg
      301 idekiksptf tqlrqiidpl rylntiyqpr laipk
//
LOCUS       WP_258029551             142 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258029551
VERSION     WP_258029551.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 142)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 142)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 142)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..>142
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
     Region          <21..116
                     /region_name="PRK11561"
                     /note="isovaleryl CoA dehydrogenase; Provisional"
                     /db_xref="CDD:183199"
     Region          <21..67
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
ORIGIN      
        1 gcvcactefr aggeaargag damevrggtg cieewsdarv lrdghlgsiw egtsnivald
       61 varavkrega raplrafllg araparlpga satrlrrala rasdasphag pkaddacgra
      121 aaaartraaa atpldrvghw fg
//
LOCUS       WP_258029575             365 aa            linear   BCT 02-MAR-2025
DEFINITION  ESPR-type extended signal peptide-containing protein, partial
            [Salmonella enterica].
ACCESSION   WP_258029575
VERSION     WP_258029575.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 365)
  AUTHORS   Leyton,D.L., Rossiter,A.E. and Henderson,I.R.
  TITLE     From self sufficiency to dependence: mechanisms and factors
            important for autotransporter biogenesis
  JOURNAL   Nat Rev Microbiol 10 (3), 213-225 (2012)
   PUBMED   22337167
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 365)
  AUTHORS   Desvaux,M., Scott-Tucker,A., Turner,S.M., Cooper,L.M., Huber,D.,
            Nataro,J.P. and Henderson,I.R.
  TITLE     A conserved extended signal peptide region directs
            posttranslational protein translocation via a novel mechanism
  JOURNAL   Microbiology (Reading) 153 (Pt 1), 59-70 (2007)
   PUBMED   17185535
REFERENCE   3  (residues 1 to 365)
  AUTHORS   Desvaux,M., Cooper,L.M., Filenko,N.A., Scott-Tucker,A.,
            Turner,S.M., Cole,J.A. and Henderson,I.R.
  TITLE     The unusual extended signal peptide region of the type V secretion
            system is phylogenetically restricted
  JOURNAL   FEMS Microbiol Lett 264 (1), 22-30 (2006)
   PUBMED   17020545
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024418.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13018.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         1..>365
                     /product="ESPR-type extended signal peptide-containing
                     protein"
     Region          1..50
                     /region_name="ESPR"
                     /note="Extended Signal Peptide of Type V secretion system;
                     pfam13018"
                     /db_xref="CDD:463773"
     Region          93..227
                     /region_name="LbR_YadA-like"
                     /note="YadA-like, left-handed beta-roll; cd12820"
                     /db_xref="CDD:240612"
     Site            order(94,97..98,106,111..112,120,122,124..126,134,136,
                     152..154,162,164,166..168,176,178,180..182,190,192,
                     194..196,204,206,208..209,213,215..216,219..224)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:240612"
     Region          242..>364
                     /region_name="VOMP_auto_Cterm"
                     /note="Vomp family autotransporter C-terminal domain;
                     NF033870"
                     /db_xref="CDD:411434"
ORIGIN      
        1 mnrifkvlwn aatgtfivts etaksrgkks grrklavsal vglssimvsa dalanagndt
       61 gsgvtvsgtt gsgwiaigtd atantytnvd gasaamgyha samgkwstai gsysqstgds
      121 slalgvksts agdraiamga sssasgsysm amgvyanssg aksvalgyks vasgatsaal
      181 gyqatasgdd saafgngaka vgtnsvalgs gsiaqednsv avgnsttqrq ityvakgdin
      241 ststdavtga qiyslsqsva drlgggasvn sdgtvnaply evgtgiynnv gsalsalnts
      301 itnteasvag laedallwdd stsafsasht gnvskitnla agalaadstd avngsqlfdt
      361 nekvd
//
LOCUS       WP_258029583              98 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein,
            partial [Staphylococcus aureus].
ACCESSION   WP_258029583
VERSION     WP_258029583.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 98)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..98
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
     Region          <14..95
                     /region_name="YbxI"
                     /note="Beta-lactamase class D [Defense mechanisms];
                     COG2602"
                     /db_xref="CDD:442014"
ORIGIN      
        1 vivfknmmeq nnhfskkakn qlsssllikk nenyelygkt gtgivngkyn ngwfvgyvit
       61 nhdkyyfsth lsdekasgen aklinekilk emgvlngq
//
LOCUS       WP_258029592             167 aa            linear   BCT 02-MAR-2025
DEFINITION  AarF/UbiB family protein, partial [Salmonella enterica].
ACCESSION   WP_258029592
VERSION     WP_258029592.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 167)
  AUTHORS   Macinga,D.R., Cook,G.M., Poole,R.K. and Rather,P.N.
  TITLE     Identification and characterization of aarF, a locus required for
            production of ubiquinone in Providencia stuartii and Escherichia
            coli and for expression of 2'-N-acetyltransferase in P. stuartii
  JOURNAL   J Bacteriol 180 (1), 128-135 (1998)
   PUBMED   9422602
REFERENCE   2  (residues 1 to 167)
  AUTHORS   Bousquet,I., Dujardin,G. and Slonimski,P.P.
  TITLE     ABC1, a novel yeast nuclear gene has a dual function in
            mitochondria: it suppresses a cytochrome b mRNA translation defect
            and is essential for the electron transfer in the bc 1 complex
  JOURNAL   EMBO J 10 (8), 2023-2031 (1991)
   PUBMED   1648478
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015094.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03109.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         1..>167
                     /product="AarF/UbiB family protein"
     Region          3..>167
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 mtpgevrrly fiirtflsyg ldeliprmrl tlplrlwrys lfwmpnrhkd kllgerlrla
       61 lqelgpvwik fgqmlstrrd lfppqiadql allqdkvapf dgrlakaqie eamgglpvea
      121 wfddfdiqpl asasiaqvht arlksngkev vikvirpdil pviqadl
//
LOCUS       WP_258029626             165 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Salmonella enterica].
ACCESSION   WP_258029626
VERSION     WP_258029626.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 165)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 165)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 165)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 165)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         <1..165
                     /product="ATP-binding protein"
     Region          <1..165
                     /region_name="PRK10490"
                     /note="sensor protein KdpD; Provisional"
                     /db_xref="CDD:236701"
ORIGIN      
        1 ggfnlkkewl tleevvgsal qmlepgllhp itlslpqqlt lihvdgplfe rvlinllena
       61 vkyagpqasi gidaavkddr lqldvwdngp gipagqeqki fdkfargnke savpgvglgl
      121 aichaivevh ggtltaynrp qggacfrvtl pqgkppgldd fhedm
//
LOCUS       WP_258029640              78 aa            linear   BCT 02-MAR-2025
DEFINITION  Csa1 family protein, partial [Staphylococcus aureus].
ACCESSION   WP_258029640
VERSION     WP_258029640.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 78)
  AUTHORS   Schluepen,C., Malito,E., Marongiu,A., Schirle,M., McWhinnie,E., Lo
            Surdo,P., Biancucci,M., Falugi,F., Nardi-Dei,V., Marchi,S.,
            Fontana,M.R., Lombardi,B., De Falco,M.G., Rinaudo,C.D.,
            Spraggon,G., Nissum,M., Bagnoli,F., Grandi,G., Bottomley,M.J. and
            Liberatori,S.
  TITLE     Mining the bacterial unknown proteome: identification and
            characterization of a novel family of highly conserved protective
            antigens in Staphylococcus aureus
  JOURNAL   Biochem J 455 (3), 273-284 (2013)
   PUBMED   23895222
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016396.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04507.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>78
                     /product="Csa1 family protein"
     Region          1..>78
                     /region_name="DUF576"
                     /note="Csa1 family; cl23996"
                     /db_xref="CDD:420141"
ORIGIN      
        1 meyikkialy msvllliifi ggcgnmkeeq kkeantnktd skeeqikksf aktldmypte
       61 nledfynkeg yrdgefkk
//
LOCUS       WP_258029656             191 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_258029656
VERSION     WP_258029656.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 191)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>191
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
     Region          14..>188
                     /region_name="PRK09841"
                     /note="tyrosine-protein kinase"
                     /db_xref="CDD:182106"
ORIGIN      
        1 mstgtkkenv qagdeidlrk ligdiidhrk liitltslfl flsitysmfa tpiyradalv
       61 qveqkqgnai lnslsqmlpd grlqstpeiv llqsrmilgk tiddlnlqae iknkylpiig
      121 kgwarltsqp kpsitlgyfk ftgetsenip vfdikiiddk tysinfngve yeglvdklld
      181 tnqfailikq l
//
LOCUS       WP_258029651             102 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Staphylococcus aureus].
ACCESSION   WP_258029651
VERSION     WP_258029651.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017416.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05598.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>102
                     /product="transposase"
     Region          1..>102
                     /region_name="COG3666"
                     /note="Transposase, IS1182 family [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:442883"
ORIGIN      
        1 myknynmtql tlpmetsvli ptndisrhin divetipdne fdefrhhrga tsyhpkmmlk
       61 vilyaytqsv fsgrkiekml ndsirmmwls qnqkpsykii nr
//
LOCUS       WP_258029667              87 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaA ATPase domain-containing protein, partial [Staphylococcus
            aureus].
ACCESSION   WP_258029667
VERSION     WP_258029667.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 87)
  AUTHORS   Erzberger,J.P., Pirruccello,M.M. and Berger,J.M.
  TITLE     The structure of bacterial DnaA: implications for general
            mechanisms underlying DNA replication initiation
  JOURNAL   EMBO J 21 (18), 4763-4773 (2002)
   PUBMED   12234917
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012529.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00308.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..>87
                     /product="DnaA ATPase domain-containing protein"
     Region          <1..>75
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 vlksmknfqv vpylnmnnfs dnilryiddn slkkiknslm knnksallii ddvermsdkv
       61 sfeeflgfir ndlidyldck vlfignl
//
LOCUS       WP_258029718             276 aa            linear   BCT 02-MAR-2025
DEFINITION  SpoIIE family protein phosphatase, partial [Staphylococcus aureus].
ACCESSION   WP_258029718
VERSION     WP_258029718.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 276)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>276
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
     Region          6..80
                     /region_name="RsbU_N"
                     /note="Phosphoserine phosphatase RsbU, N-terminal domain;
                     pfam08673"
                     /db_xref="CDD:430145"
     Region          <82..276
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
ORIGIN      
        1 meefkqhykg lidesltcqd kvelikkcek ytdevirkdv lpedivdihk nyiltlnltc
       61 edvfktldvl qeivkgfgys yrdyqrlvdk lqvhdkeidl asslqqtmlk tdipqfdsiq
      121 igvisvaaqk vsgdyfnlid hndgtmsfav advigkgipa alamsmikfg mdsyghsqlp
      181 sdglkrlnrv vekninqnmf vtmfyglyee mnhllycssa ghepgyiyra ekeefeeisv
      241 rgrvlgissq tryqqqeipi ylddliiilt dgvtea
//
LOCUS       WP_258029741             960 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ESPR-type extended signal peptide-containing protein,
            partial [Burkholderia].
ACCESSION   WP_258029741
VERSION     WP_258029741.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
REFERENCE   1  (residues 1 to 960)
  AUTHORS   Leyton,D.L., Rossiter,A.E. and Henderson,I.R.
  TITLE     From self sufficiency to dependence: mechanisms and factors
            important for autotransporter biogenesis
  JOURNAL   Nat Rev Microbiol 10 (3), 213-225 (2012)
   PUBMED   22337167
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 960)
  AUTHORS   Desvaux,M., Scott-Tucker,A., Turner,S.M., Cooper,L.M., Huber,D.,
            Nataro,J.P. and Henderson,I.R.
  TITLE     A conserved extended signal peptide region directs
            posttranslational protein translocation via a novel mechanism
  JOURNAL   Microbiology (Reading) 153 (Pt 1), 59-70 (2007)
   PUBMED   17185535
REFERENCE   3  (residues 1 to 960)
  AUTHORS   Desvaux,M., Cooper,L.M., Filenko,N.A., Scott-Tucker,A.,
            Turner,S.M., Cole,J.A. and Henderson,I.R.
  TITLE     The unusual extended signal peptide region of the type V secretion
            system is phylogenetically restricted
  JOURNAL   FEMS Microbiol Lett 264 (1), 22-30 (2006)
   PUBMED   17020545
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024418.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13018.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         1..>960
                     /product="ESPR-type extended signal peptide-containing
                     protein"
     Region          1..50
                     /region_name="ESPR"
                     /note="Extended Signal Peptide of Type V secretion system;
                     pfam13018"
                     /db_xref="CDD:463773"
     Region          <84..960
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
ORIGIN      
        1 mnkiyrkvwn kargqlvvas elassrssvg easvdagrsg drtgsvafts eernpgsgrm
       61 iplamgamlm fsipawaalv gaengtgnss dgtasttags gsaqasntgi afvgdvdcsa
      121 ftsgpgtyag vygsgsnylg glfgfgpqts masygdpsna ganagivawq gaaqtfgnvt
      181 yagngtqsgs htqafgmnsf aagcvahatg lsataigwgt tasgagsval glystasgqg
      241 slafgtsaaa tatdtialgt latanavsgv aigantqasa anataiggns sganlgaqat
      301 aagataiggn atagaaatat naiaiggqss akdandvavg lgaragtgsg agndlaigng
      361 atatggnsia qgagasanaa gavaigksas aaggqavsig vantasgnga vaigdpnvat
      421 gtgavalgnn ntangqgava lgnvstavgq gsvalgnssn aaaaggvalg dtasavmagg
      481 lalgslatas nandvalgag sktaaavats tvsvnganya vagsgpastv svgapgsert
      541 itnvaagqvs agstdavngs elyatnqait tglstanssi aslstststg lssansnigs
      601 lstglstans tvaslsssts tglssansav aslstsastg lssansnigs lstglsttns
      661 tvaslststv aglnslstgl sttnsnvasl ssststglss ansavaslst ststglssan
      721 snigslstgl stanstvasl ststvaglns lstglsttns nvaslsssts tglssansav
      781 aslstststg lssansnigs lstglsttns tvaslsssts tgigslstgv ansvqydspa
      841 htsitlggas atspvkitnl aaganpsdav nyeqltslst sastglssan saitslstst
      901 stgigslstg lsttnsnvas lstsastgls sansaitsls tststgigsl stglsttnsn
//
LOCUS       WP_258029747             239 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: condensation domain-containing protein, partial
            [Burkholderia].
ACCESSION   WP_258029747
VERSION     WP_258029747.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
REFERENCE   1  (residues 1 to 239)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         1..>239
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          3..53
                     /region_name="TubC_N"
                     /note="TubC N-terminal docking domain; pfam18563"
                     /db_xref="CDD:436580"
     Region          98..>239
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mnvnslldll qrknirihvd rdelvvrapr galnaeltqa lkkskaelid vlrrrgaqas
       61 pdpvritpaq ltlvalsqes idalvakveg gaanvqdiyp laplqegilf hhlmsgesdp
      121 yvlsgvlafr grevmerfvs alqqvidrhd ilrtgffweg leqpvqvvqr ratlpvsvve
      181 ldaregdivr qletrfdsrg yrmdvsrapl mhvhaacdge herwvarvlf hhlsidhtt
//
LOCUS       WP_258029748             401 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: Ig-like domain-containing protein, partial
            [Burkholderia].
ACCESSION   WP_258029748
VERSION     WP_258029748.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         <1..>401
                     /product="Ig-like domain-containing protein"
     Region          <54..332
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 gntspasstl pvtvdtinpp paltlsplsd tfgsgtsgtn hdnitsatlp tfngtaaags
       61 yvqlydvtgg ttvsvgsava dssggwtttl tsplsgsasg vshtlvavgv dpagntstvs
      121 gpdvvvidna aaalpgptma sasdtgasss dgitsntapv ftgtgaeaga lvtiyangts
      181 vghatadasg nytiqsnalg adgryqitaq qvdiagntsp sssvtamtld tsepapvnlh
      241 lvddtfgqgt agtssdnltk dsrvtisgta sagdvvtlmd gatsvgqvta dasgnwtiqt
      301 asladgthsl tasavdlagn tspasstlpv tvdtinpppa ltlsplsdtf gsgtsgtnhd
      361 nitsatlptf ngtaaagsyv qlydvtggtt vsvgsavads s
//
LOCUS       WP_258029750             232 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: condensation domain-containing protein, partial
            [Burkholderia].
ACCESSION   WP_258029750
VERSION     WP_258029750.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
REFERENCE   1  (residues 1 to 232)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         <1..>232
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..>231
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 fwegleqpvq vvqrratlpv svveldareg divrqletrf dsrgyrmdvs raplmhvhaa
       61 cdgeherwva rvlfhhlsid httlerviee araigqgrae dlprpepfrn fvaqarlgvs
      121 eadheayfra klgdidepta pfgllsvqgd greiaeaarr lkpelsgalr gharrlgvsa
      181 asmmhvawgl vlsrttgrqd vvfgtvlfgr mqggaqsdra lglfintlpv rm
//
LOCUS       WP_258029771              27 aa            linear   BCT 02-MAR-2025
DEFINITION  E domain-containing protein, partial [Staphylococcus aureus].
ACCESSION   WP_258029771
VERSION     WP_258029771.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 27)
  AUTHORS   Gruszka,D.T., Wojdyla,J.A., Bingham,R.J., Turkenburg,J.P.,
            Manfield,I.W., Steward,A., Leech,A.P., Geoghegan,J.A., Foster,T.J.,
            Clarke,J. and Potts,J.R.
  TITLE     Staphylococcal biofilm-forming protein has a contiguous rod-like
            structure
  JOURNAL   Proc Natl Acad Sci U S A 109 (17), E1011-E1018 (2012)
   PUBMED   22493247
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028351.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17041.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..27
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..>27
                     /product="E domain-containing protein"
ORIGIN      
        1 efdpklptge keevpgkpgi knpetgd
//
LOCUS       WP_258029756             198 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Staphylococcus aureus].
ACCESSION   WP_258029756
VERSION     WP_258029756.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 198)
  AUTHORS   Yeo,C.C. and Poh,C.L.
  TITLE     Characterization of IS1474, an insertion sequence of the IS21
            family isolated from Pseudomonas alcaligenes NCIB 9867
  JOURNAL   FEMS Microbiol Lett 149 (2), 257-263 (1997)
   PUBMED   9141667
REFERENCE   2  (residues 1 to 198)
  AUTHORS   Solinas,F., Marconi,A.M., Ruzzi,M. and Zennaro,E.
  TITLE     Characterization and sequence of a novel insertion sequence,
            IS1162, from Pseudomonas fluorescens
  JOURNAL   Gene 155 (1), 77-82 (1995)
   PUBMED   7698671
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01695.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..198
                     /product="ATP-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <40..186
                     /region_name="IS21_help_AAA"
                     /note="IS21-like element helper ATPase IstB; NF038214"
                     /db_xref="CDD:439516"
ORIGIN      
        1 gytamaifky ieekgyegky tilreycknk iqnetkkitf fedninicfl dnrvvgkthl
       61 tislgieack qniktrfytf kelidlltvt dskeiinktl kqlsrielli ideicysait
      121 keqadlfyql mslkyemkst iittnitfss wgesfsnkiv saaiidrlvh hskvfkitge
      181 syrlkdykte kslnirqs
//
LOCUS       WP_258029672             640 aa            linear   BCT 02-MAR-2025
DEFINITION  neuraminidase-like domain-containing protein [Pseudomonas
            fluorescens].
ACCESSION   WP_258029672
VERSION     WP_258029672.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas fluorescens
  ORGANISM  Pseudomonas fluorescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 640)
  AUTHORS   Piper,S.J., Brillault,L., Rothnagel,R., Croll,T.I., Box,J.K.,
            Chassagnon,I., Scherer,S., Goldie,K.N., Jones,S.A., Schepers,F.,
            Hartley-Tassell,L., Ve,T., Busby,J.N., Dalziel,J.E., Lott,J.S.,
            Hankamer,B., Stahlberg,H., Hurst,M.R.H. and Landsberg,M.J.
  TITLE     Cryo-EM structures of the pore-forming A subunit from the Yersinia
            entomophaga ABC toxin
  JOURNAL   Nat Commun 10 (1), 1952 (2019)
   PUBMED   31028251
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042460.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20220.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Pseudomonas fluorescens"
                     /db_xref="taxon:294"
     Protein         1..640
                     /product="neuraminidase-like domain-containing protein"
                     /calculated_mol_wt=72793
     Region          9..136
                     /region_name="ABC_toxin_N"
                     /note="ABC toxin N-terminal region; pfam20220"
                     /db_xref="CDD:466371"
     Region          167..>306
                     /region_name="Neuraminidase"
                     /note="Neuraminidase-like domain; pfam18413"
                     /db_xref="CDD:465758"
ORIGIN      
        1 msdtltqhln ehlrdamlgf ylnsvlpedt avadtvktvd dvytywlldp qvshtvpttr
       61 vasaiaslqq yitgiylgle pgydeqgmsa deqtewrdql lsyslwrahq qlqhypatyl
      121 spalrhdksd nfrqlenqln qfriepaplq tavhsylsrf ealaniktln gyidgdkdsf
      181 asstyyftgk sspentyywr tlkmasgdaa tppawsswqk iplsiddnvp eqtirpvvfn
      241 grlfvvwaqc inptsssrdi tpigrgdves ereyqqrlet rikttylqlr lyfsykkldd
      301 swsvpqaciq eyslaqglde lssedlmsat asiavldsks qppslflgls aqpnhqtass
      361 hngvhrhffq avrldqhfnv hwletlgstr rmfswhkese lagryqalfg hhnrsrfqfr
      421 apetvqvkvh sltnnaphgt thgwnyednq qhirslsaes dirfnrttsv levttrlakr
      481 fephrtvrfs kadamanlti tlsssgpaqn emlalgptae iflesarlat fsnvridltl
      541 kcnetgvsya qfikmqrisr rplpcrrlkk ikkprkarhs icatnalakk psiifsirrt
      601 ppipsfsrst tikrspaamp ttwywtrsrs srnnactnpc
//
LOCUS       WP_258029804              54 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Staphylococcus aureus].
ACCESSION   WP_258029804
VERSION     WP_258029804.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 54)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 54)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 54)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 54)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..54
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         1..>54
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          2..>48
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            34..41
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213183"
ORIGIN      
        1 miqisninks fkknrvlkni sfdiekgtct aligkngagk stlvdilsnk iiad
//
LOCUS       WP_258029825             310 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258029825
VERSION     WP_258029825.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 310)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>310
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          3..53
                     /region_name="TubC_N"
                     /note="TubC N-terminal docking domain; pfam18563"
                     /db_xref="CDD:436580"
     Region          98..>310
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mnvnslldll qrknirihvd rdelvvrapr galnaeltqa lkkskaelid vlrrrgaqas
       61 pdpvritpaq ltlvalsqes idalvakveg gaanvqdiyp laplqegilf hhlmsgesdp
      121 yvlsgvlafr grevmerfvs alqqvidrhd ilrtgffweg leqpvqvvqr ratlpvsvve
      181 ldaregdivr qletrfdsrg yrmdvsrapl mhvhaacdge herwvarvlf hhlsidhttl
      241 ervieearai gqgrvedlpr papfrnfvaq arlgvseadh eayfraklgd ideptapfgl
      301 lsvqgdgrei
//
LOCUS       WP_258029854            1142 aa            linear   BCT 02-MAR-2025
DEFINITION  SdrD B-like domain-containing protein, partial [Staphylococcus
            aureus].
ACCESSION   WP_258029854
VERSION     WP_258029854.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028519.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17210.9
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..1142
                     /product="SdrD B-like domain-containing protein"
     Region          1..1142
                     /region_name="MSCRAMM_SdrD"
                     /note="MSCRAMM family adhesin SdrD; NF012181"
                     /db_xref="CDD:467951"
ORIGIN      
        1 kgmisnrlnk fsirkytvgt asilvgttli fglgnqeaka aentstenak qddattsdnk
       61 evvsetenns ttennstnpi kketntdsqp eakkestsss tqkqqnnvta ttetkpqnie
      121 kenvkpstdk tatedtsvil eekkapnntn ndvttkpsts epstseiqtk pttpqestni
      181 ensqpqptps kvdnqvtdat npkepvnvsk eelknnpekl kelvrndsnt dhstkpvata
      241 ptsvapkrvn akmrfavaqp aavasnnvnd likvtkqtik vgdgkdnvaa ahdgkdieyd
      301 teftidnkvk kgdtmtinyd knvipsdltd kndpiditdp sgeviakgtf dkatkqityt
      361 ftdyvdkyed iksrltlysy idkktvpnet slnltfatag ketsqnvtvd yqdpmvhgds
      421 niqsiftkld edkqtieqqi yvnplkksat ntkvdiagsq vddygniklg ngstiidqnt
      481 eikvykvnsd qqlpqsnriy dfsqyedvts qfdnkksfsn nvatldfgdi nsayiikvvs
      541 kytptsdgel diaqgtsmrt tdkygyynya gysnfivtsn dtgggdgtvk peeklykigd
      601 yvwedvdkdg vqgtdskekp manvlvtlty pdgttksvrt danghyefgg lkdgetytvk
      661 fetptgylpt kvngttdgek dsngssvtvk ingkddmsld tgfykepkyn lgdyvwedtn
      721 kdgiqdanep gikdvkvtlk dstgkvigtt ttdasgkykf tdldngnytv efetpagytp
      781 tvknttaddk dsngltttgv ikdadnmtld sgfyktpkys lgdyvwydsn kdgkqdstek
      841 gikdvtvtlq nekgevigtt ktdengkyrf dnldsgkykv ifekpagltq tvtntteddk
      901 dadggevdvt itdhddftld ngyfeedtsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd
      961 sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd
     1021 sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd sdsdsdsdsd
     1081 sdagkhtpvk pmsttkdhhn kakalpetgs enngsnnatl fgglfaalgs lllfgrrkkq
     1141 nk
//
LOCUS       WP_258029861             459 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: condensation domain-containing protein, partial
            [Burkholderia].
ACCESSION   WP_258029861
VERSION     WP_258029861.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia
  ORGANISM  Burkholderia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
REFERENCE   1  (residues 1 to 459)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Burkholderia"
                     /db_xref="taxon:32008"
     Protein         <1..>459
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <3..148
                     /region_name="entF"
                     /note="enterobactin non-ribosomal peptide synthetase EntF;
                     PRK10252"
                     /db_xref="CDD:236668"
     Region          149..>459
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation (C) domain of non-ribosomal
                     peptide synthetases(NRPSs) and similar domains including
                     the C-domain of SgcC5, a free-standing NRPS with both
                     ester- and amide- bond forming activity; cd19531"
                     /db_xref="CDD:380454"
ORIGIN      
        1 gdadvaalra qaaqhlpsym vpsayvrlda wpltpngkld rralpapadd ayaraeyeap
       61 qgakeealaa iwrellhver vsrhdnffel gghsllavql vsrlrqalsv evalgtvfda
      121 pvlsalasrl ddntaavlpp iplaprdgri alslaqqrlw fltqlegvse ayhmsgavrl
      181 dgplnrevlq ralnrivmrh ealrtcfare egepiqvirp hadltvsyhd lreaeqseqr
      241 akdlsqahas apfdlsrdlp vrvlllqlad eahvvqvvmh hiasdgwsvg vflqelsaly
      301 gsfiaeqgdp laplplqyad yaawqrrwla sgqlekqgaf wqtnlsgapt llelptdrpr
      361 ppkqshagas vevklgaals ervkrlsqrh gvtpymtlls swaavlsrls gqeevvigsp
      421 vagrnrteve aligffvntl alrldlssep tvgellkrt
//
LOCUS       WP_258029879             178 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258029879
VERSION     WP_258029879.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 178)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         <1..>178
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..>178
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation (C) domain of non-ribosomal
                     peptide synthetases(NRPSs) and similar domains including
                     the C-domain of SgcC5, a free-standing NRPS with both
                     ester- and amide- bond forming activity; cd19531"
                     /db_xref="CDD:380454"
ORIGIN      
        1 wsvgvflqel salygsfiae qgdplaplpl qyadyaawqr rwlasgqlek qgafwqtnls
       61 gaptllelpt drprppkqsh agasievklg aalservkrl sqrhgvtpym tllsswaavl
      121 srlsgqeevv igspvagrnr tevealigff vntlalrldl sseptvgell krtkaqvl
//
LOCUS       WP_258029890              51 aa            linear   BCT 02-MAR-2025
DEFINITION  glutamate--tRNA ligase family protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258029890
VERSION     WP_258029890.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 51)
  AUTHORS   Rath,V.L., Silvian,L.F., Beijer,B., Sproat,B.S. and Steitz,T.A.
  TITLE     How glutaminyl-tRNA synthetase selects glutamine
  JOURNAL   Structure 6 (4), 439-449 (1998)
   PUBMED   9562563
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012951.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00749.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..51
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>51
                     /product="glutamate--tRNA ligase family protein"
                     /GO_function="GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
     Region          20..>51
                     /region_name="GlnS"
                     /note="Glutamyl- or glutaminyl-tRNA synthetase
                     [Translation, ribosomal structure and biogenesis];
                     COG0008"
                     /db_xref="CDD:439779"
ORIGIN      
        1 mrrrvvsida pleafelsfm trpvrtrfap sptgfihlgn irsalypwaf a
//
LOCUS       WP_258029917             158 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Staphylococcus aureus].
ACCESSION   WP_258029917
VERSION     WP_258029917.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 158)
  AUTHORS   Davies,D.R., Mahnke Braam,L., Reznikoff,W.S. and Rayment,I.
  TITLE     The three-dimensional structure of a Tn5 transposase-related
            protein determined to 2.9-A resolution
  JOURNAL   J Biol Chem 274 (17), 11904-11913 (1999)
   PUBMED   10207011
REFERENCE   2  (residues 1 to 158)
  AUTHORS   DasSarma,S.
  TITLE     Identification and analysis of the gas vesicle gene cluster on an
            unstable plasmid of Halobacterium halobium
  JOURNAL   Experientia 49 (6-7), 482-486 (1993)
   PUBMED   8335077
REFERENCE   3  (residues 1 to 158)
  AUTHORS   Ferrante,A.A. and Lessie,T.G.
  TITLE     Nucleotide sequence of IS402 from Pseudomonas cepacia
  JOURNAL   Gene 102 (1), 143-144 (1991)
   PUBMED   1650732
REFERENCE   4  (residues 1 to 158)
  AUTHORS   De Meirsman,C., Van Soom,C., Verreth,C., Van Gool,A. and
            Vanderleyden,J.
  TITLE     Nucleotide sequence analysis of IS427 and its target sites in
            Agrobacterium tumefaciens T37
  JOURNAL   Plasmid 24 (3), 227-234 (1990)
   PUBMED   1963949
REFERENCE   5  (residues 1 to 158)
  AUTHORS   Sato,S., Nakada,Y. and Shiratsuchi,A.
  TITLE     IS421, a new insertion sequence in Escherichia coli
  JOURNAL   FEBS Lett 249 (1), 21-26 (1989)
   PUBMED   2542093
REFERENCE   6  (residues 1 to 158)
  AUTHORS   Kroger,M. and Hobom,G.
  TITLE     Structural analysis of insertion sequence IS5
  JOURNAL   Nature 297 (5862), 159-162 (1982)
   PUBMED   6281654
REFERENCE   7  (residues 1 to 158)
  AUTHORS   Klaer,R., Kuhn,S., Tillmann,E., Fritz,H.J. and Starlinger,P.
  TITLE     The sequence of IS4
  JOURNAL   Mol Gen Genet 181 (2), 169-175 (1981)
   PUBMED   6268937
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01609.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..>158
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <1..156
                     /region_name="transpos_IS1182"
                     /note="IS1182 family transposase; NF033551"
                     /db_xref="CDD:468080"
ORIGIN      
        1 kngqlkpgyn lqiatnsqfv lsydlfqnpt dtrtlipflt miqntfgylp eyivadagyg
       61 seqnymaiid dfnktplity gmfikdktrk fksdifntqn wkydelndef icpnnkrigf
      121 kryayrndry gfkrdfklye cddcsacslr qqcmkpns
//
LOCUS       WP_258029974             122 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Pectobacterium
            odoriferum].
ACCESSION   WP_258029974
VERSION     WP_258029974.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium odoriferum
  ORGANISM  Pectobacterium odoriferum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 122)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 122)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 122)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 122)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 122)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 122)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 122)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 122)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 122)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Pectobacterium odoriferum"
                     /db_xref="taxon:78398"
     Protein         1..122
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=13608
     Region          <30..118
                     /region_name="diguan_DgcJ"
                     /note="diguanylate cyclase DgcJ; NF040885"
                     /db_xref="CDD:468821"
ORIGIN      
        1 mlvssgldnt ilisffviht vaaektenil glalgnairk ndygirlggd efclvlidys
       61 ltksrdviar aqeylltidk eklvafswga hqlhqgdtle vamlkadell yqhkpskyee
      121 rk
//
LOCUS       WP_258030050             430 aa            linear   BCT 02-MAR-2025
DEFINITION  PBECR2 nuclease fold domain-containing protein, partial
            [Campylobacter concisus].
ACCESSION   WP_258030050
VERSION     WP_258030050.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 430)
  AUTHORS   Iyer,L.M., Burroughs,A.M., Anand,S., de Souza,R.F. and Aravind,L.
  TITLE     Polyvalent Proteins, a Pervasive Theme in the Intergenomic
            Biological Conflicts of Bacteriophages and Conjugative Elements
  JOURNAL   J Bacteriol 199 (15), e00245-17 (2017)
   PUBMED   28559295
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037113.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18810.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..430
                     /product="PBECR2 nuclease fold domain-containing protein"
     Region          <254..343
                     /region_name="PBECR2"
                     /note="phage-Barnase-EndoU-ColicinE5/D-RelE like
                     nuclease2; pfam18810"
                     /db_xref="CDD:436754"
ORIGIN      
        1 lleafknevk alreeaqtge ikgdnfitke spapksdlnv kmdlapnvrd lskitteeis
       61 adldylaskh pemfskpsdv frlikeikne pthffknnrp dialivkvle dgsvgklgiv
      121 kesghvghls kstnknemdr lrkvnekelk vgtpyptlqr advnqvgpta gakstfsssd
      181 esiisqkdke eqkvvqqasi ktnnnesikt ivenlsrnre ialklkpkad llmavkdfsk
      241 pietpifkak vsidkmlnhi iekpngdkrl sylnlvkptl enplfvtkee nryrfvktfi
      301 ddkekvlkfl sviknnkgev lgitatpikn tdiknlikgd ivwggdtlss lstpqavkre
      361 ldtdksiiaq nskdsvekll taidtssdkv glvkkvllnk dvsdgvkaka vnrltknkis
      421 qgakivifll
//
LOCUS       WP_258030121             678 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6538 domain-containing protein [Campylobacter concisus].
ACCESSION   WP_258030121
VERSION     WP_258030121.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042623.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20172.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..678
                     /product="DUF6538 domain-containing protein"
                     /calculated_mol_wt=77444
     Region          3..>51
                     /region_name="DUF6538"
                     /note="Domain of unknown function (DUF6538); pfam20172"
                     /db_xref="CDD:466323"
     Region          500..666
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(531,544..545,632,634,652)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:271175"
ORIGIN      
        1 mqylvkrngi yyfrvaiply lrpyfgnkte yitsfltkrf dtaknrakiy siifnaikka
       61 wkmnlsseli ehlvlmllka keaksikehd mlgryinldg llslnlflkq slkedgllsv
      121 iskevddick klsctdshtk kllgkrvlea tidninhisy kmcknqklln dkqqtfvplg
      181 kkhksanldd stkdeiakgv keanidsyqd dietlkrqnl vlpftkkslk hsvselrdai
      241 nelarqkgal tqndilrifg celspdgdne lsddlkfgyg nlndptfggq vklykadkyk
      301 dkgivlsdig tkdlaiddts dasgmtfnea inffqklfsn rakslrykld sstkneskan
      361 litlnsafkn yvsntsisnn wsdstfglvr hvgrlmfmkf gdgldikkik rddllnfrnv
      421 llqlptklsq nslykdksld eiialaknrp kiskstikky ivrvseffky cydsdyidkn
      481 paidlqisin qddvtnknpy edsdinalld ivskikssgd tksqriskde lffvthiaay
      541 sgmrlneiiq lntddiveky nivcfslntk idvktgkskt lktrnsvriv pihsklssig
      601 lfefieskkk larkcdkavr lfscdnkdfs eyfrkkintk vvkdsdktrt fhsfrhtfin
      661 kliqsgqrve hiacpcra
//
LOCUS       WP_258029878             108 aa            linear   BCT 02-MAR-2025
DEFINITION  tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase
            subunit type 1 TsaE, partial [Burkholderia pseudomallei].
ACCESSION   WP_258029878
VERSION     WP_258029878.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 108)
  AUTHORS   Lauhon,C.T.
  TITLE     Mechanism of N6-threonylcarbamoyladenonsine (t(6)A) biosynthesis:
            isolation and characterization of the intermediate
            threonylcarbamoyl-AMP
  JOURNAL   Biochemistry 51 (44), 8950-8963 (2012)
   PUBMED   23072323
REFERENCE   2  (residues 1 to 108)
  AUTHORS   Deutsch,C., El Yacoubi,B., de Crecy-Lagard,V. and Iwata-Reuyl,D.
  TITLE     Biosynthesis of threonylcarbamoyl adenosine (t6A), a universal tRNA
            nucleoside
  JOURNAL   J Biol Chem 287 (17), 13666-13673 (2012)
   PUBMED   22378793
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014426.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02367.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>108
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /EC_number="2.3.1.234"
                     /GO_process="GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
     Region          16..>96
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 mrgacaerdr rrfvgerkla ladeaatial garpphapda mrgpraaahs ldgpqtqlyg
       61 dpgagkttlv ramlrgagha grvkgptyth vgayalagsd grhadeht
//
LOCUS       WP_258030140             136 aa            linear   BCT 02-MAR-2025
DEFINITION  TetR/AcrR family transcriptional regulator C-terminal
            domain-containing protein [Campylobacter concisus].
ACCESSION   WP_258030140
VERSION     WP_258030140.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 136)
  AUTHORS   Quinones,B., Pujol,C.J. and Lindow,S.E.
  TITLE     Regulation of AHL production and its contribution to epiphytic
            fitness in Pseudomonas syringae
  JOURNAL   Mol Plant Microbe Interact 17 (5), 521-531 (2004)
   PUBMED   15141956
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025605.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14246.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..136
                     /product="TetR/AcrR family transcriptional regulator
                     C-terminal domain-containing protein"
                     /calculated_mol_wt=15454
     Region          12..130
                     /region_name="TetR_C_11"
                     /note="Tetracyclin repressor-like, C-terminal domain;
                     cl23808"
                     /db_xref="CDD:474063"
ORIGIN      
        1 mkkidlkish sleefltkfa tiifsitcsk rhislgrimm segsknggkl gktfldqilk
       61 kidlvlinff erdevkakld skfsakfaak yfiqsvigay yydsllinee pklsekerkk
      121 higlcvelfl ngiskk
//
LOCUS       WP_258029800             103 aa            linear   BCT 02-MAR-2025
DEFINITION  tryptophan synthase subunit alpha, partial [Staphylococcus aureus].
ACCESSION   WP_258029800
VERSION     WP_258029800.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 103)
  AUTHORS   Rhee,S., Miles,E.W. and Davies,D.R.
  TITLE     Cryo-crystallography of a true substrate, indole-3-glycerol
            phosphate, bound to a mutant (alphaD60N) tryptophan synthase
            alpha2beta2 complex reveals the correct orientation of active site
            alphaGlu49
  JOURNAL   J Biol Chem 273 (15), 8553-8555 (1998)
   PUBMED   9535826
REFERENCE   2  (residues 1 to 103)
  AUTHORS   Hyde,C.C., Ahmed,S.A., Padlan,E.A., Miles,E.W. and Davies,D.R.
  TITLE     Three-dimensional structure of the tryptophan synthase alpha 2 beta
            2 multienzyme complex from Salmonella typhimurium
  JOURNAL   J Biol Chem 263 (33), 17857-17871 (1988)
   PUBMED   3053720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012511.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00290.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..103
                     /product="tryptophan synthase subunit alpha"
                     /EC_number="4.2.1.20"
                     /GO_function="GO:0004834 - tryptophan synthase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
     Region          <1..103
                     /region_name="TIM-like beta/alpha barrel domains"
                     /note="A large family of domains similar to triose
                     phosphate isomerase (TIM) which, in general, share an
                     eight beta/alpha closed barrel structure; cl21457"
                     /db_xref="CDD:473867"
     Site            order(54..55,75..76)
                     /site_type="other"
                     /note="phosphate binding site [ion binding]"
                     /db_xref="CDD:240075"
ORIGIN      
        1 ddkrikdivs haegfiytvt mnattgqnga fhpelkrkie sikaianvpv vagfgirtpq
       61 hvadikevad givigseivk rfksntreei ikylqsiqqt lnn
//
LOCUS       WP_258030163             131 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF711 family protein, partial [Campylobacter concisus].
ACCESSION   WP_258030163
VERSION     WP_258030163.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017019.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05167.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..>131
                     /product="DUF711 family protein"
     Region          2..>131
                     /region_name="RNR_PFL"
                     /note="Ribonucleotide reductase and Pyruvate formate
                     lyase; cl38938"
                     /db_xref="CDD:476821"
ORIGIN      
        1 mtpisliraa tdakdyviia ktldraaief gidfiggfsa lvpkgyqkgn aillnsispa
       61 lvppatafpn vtarppisvl ntiavldlgr tlkdaavasa mgcaqlvvfv tavapnsfla
      121 grflglamad v
//
LOCUS       WP_258030209             114 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Campylobacter concisus].
ACCESSION   WP_258030209
VERSION     WP_258030209.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..114
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=12398
     Region          11..>88
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mqstktsiwf lvilsglmac tslstdvylp amptmerqlh gdaeltitgf ligfaiaqlv
       61 wgpisdrigr klplfigmal fvvgsigcch vtkhersdnl aylsshrrvr gaya
//
LOCUS       WP_258030263             164 aa            linear   BCT 02-MAR-2025
DEFINITION  transglutaminase-like cysteine peptidase [Campylobacter concisus].
ACCESSION   WP_258030263
VERSION     WP_258030263.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 164)
  AUTHORS   Ginalski,K., Kinch,L., Rychlewski,L. and Grishin,N.V.
  TITLE     BTLCP proteins: a novel family of bacterial transglutaminase-like
            cysteine proteinases
  JOURNAL   Trends Biochem Sci 29 (8), 392-395 (2004)
   PUBMED   15288868
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017815.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06035.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..164
                     /product="transglutaminase-like cysteine peptidase"
                     /calculated_mol_wt=19515
     Region          <11..120
                     /region_name="COG3672"
                     /note="Predicted transglutaminase-like protein
                     [Posttranslational modification, protein turnover,
                     chaperones]"
                     /db_xref="CDD:442889"
ORIGIN      
        1 mkkiehenfi rklelinsyl nslmpryddf yntnvdvwst rgeflrrggg dceeyaiskr
       61 dslkdlgvdn qkcllvvqek ntkkyhmvla vwenlhkepl ildnlsfrvl plskrydlvp
      121 dyclmdgkyf kikkdginle pvnirmqtye dlikkekeek fwkn
//
LOCUS       WP_258030217             414 aa            linear   BCT 02-MAR-2025
DEFINITION  radical SAM protein [Campylobacter concisus].
ACCESSION   WP_258030217
VERSION     WP_258030217.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 414)
  AUTHORS   Benjdia,A., Leprince,J., Guillot,A., Vaudry,H., Rabot,S. and
            Berteau,O.
  TITLE     Anaerobic sulfatase-maturating enzymes: radical SAM enzymes able to
            catalyze in vitro sulfatase post-translational modification
  JOURNAL   J Am Chem Soc 129 (12), 3462-3463 (2007)
   PUBMED   17335281
REFERENCE   2  (residues 1 to 414)
  AUTHORS   Berteau,O., Guillot,A., Benjdia,A. and Rabot,S.
  TITLE     A new type of bacterial sulfatase reveals a novel maturation
            pathway in prokaryotes
  JOURNAL   J Biol Chem 281 (32), 22464-22470 (2006)
   PUBMED   16766528
REFERENCE   3  (residues 1 to 414)
  AUTHORS   Sofia,H.J., Chen,G., Hetzler,B.G., Reyes-Spindola,J.F. and
            Miller,N.E.
  TITLE     Radical SAM, a novel protein superfamily linking unresolved steps
            in familiar biosynthetic pathways with radical mechanisms:
            functional characterization using new analysis and information
            visualization methods
  JOURNAL   Nucleic Acids Res 29 (5), 1097-1106 (2001)
   PUBMED   11222759
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015983.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04055.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..414
                     /product="radical SAM protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0051539 - 4 iron, 4 sulfur cluster
                     binding [Evidence IEA]"
                     /calculated_mol_wt=47191
     Region          49..402
                     /region_name="HemN"
                     /note="Coproporphyrinogen-III oxidase HemN
                     (oxygen-independent) or related Fe-S oxidoreductase
                     [Coenzyme transport and metabolism]; COG0635"
                     /db_xref="CDD:440400"
ORIGIN      
        1 mrclaserqm fskrikghsv apskrpdmvs edelwefles apdenegviy ihvpfcdnic
       61 sfcsmnrtkl ddelddytkf llseiekysa tnylkskkig svyfgggtpt ilkerhleqv
      121 igalkssfni lpecefsles tlhnlnlskl rllselgvnr ysigvqtfsd agrkllnrth
      181 ssegaikhlg tlrekfdgml cvdiiynypn esveevvkda klvreldids asfyslqfle
      241 gsvlsktise dyydvevdra lhhafldeil skddyeiley tkvakkgrdq ykyirlshag
      301 advlplgkga ggrlgefgiy nmsqkmkvmg rmsarqmefd rfvnlfqypq islervrkfv
      361 seacmdelmg lfkrceengy lkvendslnf tkdgvfwgns iadavmeisk kefl
//
LOCUS       WP_258030326             132 aa            linear   BCT 02-MAR-2025
DEFINITION  phage protein Gp36 family protein [Campylobacter concisus].
ACCESSION   WP_258030326
VERSION     WP_258030326.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018704.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07030.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..132
                     /product="phage protein Gp36 family protein"
                     /calculated_mol_wt=14559
     Region          3..111
                     /region_name="Phage_Mu_Gp36"
                     /note="Bacteriophage Mu, Gp36; cl01818"
                     /db_xref="CDD:470358"
ORIGIN      
        1 mditnddllk evsarellel sdfegsgain qgviddsvnd alayissfik lpqnptsllk
       61 digvnltiie lkkrnnfpke alneqiakld alllkmaskk lpvtleddra pklgirafrh
      121 tekkmdlkdl ng
//
LOCUS       WP_258030270             110 aa            linear   BCT 02-MAR-2025
DEFINITION  Imm40 family immunity protein [Campylobacter concisus].
ACCESSION   WP_258030270
VERSION     WP_258030270.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 110)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15569.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     gene            1..110
                     /gene="imm40"
     Protein         1..110
                     /product="Imm40 family immunity protein"
                     /calculated_mol_wt=12590
     Region          15..97
                     /region_name="Imm40"
                     /note="Immunity protein 40; pfam15569"
                     /db_xref="CDD:373946"
ORIGIN      
        1 mpqellnrei flrdkigvye igwkfddvik vldiikekem mvlggdvyel nggeiiityd
       61 swsfsgsnfi ksfekaseyi nnyyknngdn fiytlvvani knntqksvss
//
LOCUS       WP_258030377             202 aa            linear   BCT 02-MAR-2025
DEFINITION  LysE/ArgO family amino acid transporter [Campylobacter concisus].
ACCESSION   WP_258030377
VERSION     WP_258030377.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 202)
  AUTHORS   Vrljic,M., Garg,J., Bellmann,A., Wachi,S., Freudl,R., Malecki,M.J.,
            Sahm,H., Kozina,V.J., Eggeling,L., Saier,M.H. Jr., Eggeling,L. and
            Saier,M.H. Jr.
  TITLE     The LysE superfamily: topology of the lysine exporter LysE of
            Corynebacterium glutamicum, a paradyme for a novel superfamily of
            transmembrane solute translocators
  JOURNAL   J Mol Microbiol Biotechnol 1 (2), 327-336 (1999)
   PUBMED   10943564
REFERENCE   2  (residues 1 to 202)
  AUTHORS   Zakataeva,N.P., Aleshin,V.V., Tokmakova,I.L., Troshin,P.V. and
            Livshits,V.A.
  TITLE     The novel transmembrane Escherichia coli proteins involved in the
            amino acid efflux
  JOURNAL   FEBS Lett 452 (3), 228-232 (1999)
   PUBMED   10386596
REFERENCE   3  (residues 1 to 202)
  AUTHORS   Aleshin,V.V., Zakataeva,N.P. and Livshits,V.A.
  TITLE     A new family of amino-acid-efflux proteins
  JOURNAL   Trends Biochem Sci 24 (4), 133-135 (1999)
   PUBMED   10322417
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10003422
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..202
                     /product="LysE/ArgO family amino acid transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015171 - amino acid transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /calculated_mol_wt=22492
     Region          1..202
                     /region_name="ArgO"
                     /note="Arginine exporter protein ArgO [Amino acid
                     transport and metabolism]; COG1279"
                     /db_xref="CDD:440890"
ORIGIN      
        1 mqafisgfft slslilaigv qnafvlkqgi krenifiicl icaisdavli fagvfglgsl
       61 vqnfpiikqi alyggflfll fyalmsfhsc ffkdlrmdts sdyarsnlkk nilltlaftw
      121 lnphvyldtm iligsvstkf kdenlifgvg aslasfcfff algylarfla pifarpiswk
      181 ileffvglim lalafmllfa sf
//
LOCUS       WP_258030434              66 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding protein [Campylobacter concisus].
ACCESSION   WP_258030434
VERSION     WP_258030434.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 66)
  AUTHORS   Mittl,P.R. and Schulz,G.E.
  TITLE     Structure of glutathione reductase from Escherichia coli at 1.86 A
            resolution: comparison with the enzyme from human erythrocytes
  JOURNAL   Protein Sci 3 (5), 799-809 (1994)
   PUBMED   8061609
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013086.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00890.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..66
                     /product="FAD-binding protein"
                     /calculated_mol_wt=6871
     Region          2..>33
                     /region_name="Molybdopterin-Binding"
                     /note="Molybdopterin-Binding (MopB) domain of the MopB
                     superfamily of proteins, a large, diverse, heterogeneous
                     superfamily of enzymes that, in general, bind
                     molybdopterin as a cofactor. The MopB domain is found in a
                     wide variety of molybdenum- and...; cl09928"
                     /db_xref="CDD:447860"
     Region          32..>66
                     /region_name="SdhA"
                     /note="Succinate dehydrogenase/fumarate reductase,
                     flavoprotein subunit [Energy production and conversion];
                     COG1053"
                     /db_xref="CDD:440673"
ORIGIN      
        1 misrrkfikt slaattlaal nleasanepk wdkefdvliv gsglsanvsg ivlaeaglkv
       61 aliekm
//
LOCUS       WP_258030382              83 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphatidylserine decarboxylase [Campylobacter concisus].
ACCESSION   WP_258030382
VERSION     WP_258030382.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 83)
  AUTHORS   Matsumoto,K., Okada,M., Horikoshi,Y., Matsuzaki,H., Kishi,T.,
            Itaya,M. and Shibuya,I.
  TITLE     Cloning, sequencing, and disruption of the Bacillus subtilis psd
            gene coding for phosphatidylserine decarboxylase
  JOURNAL   J Bacteriol 180 (1), 100-106 (1998)
   PUBMED   9422599
REFERENCE   2  (residues 1 to 83)
  AUTHORS   Trotter,P.J., Pedretti,J., Yates,R. and Voelker,D.R.
  TITLE     Phosphatidylserine decarboxylase 2 of Saccharomyces cerevisiae.
            Cloning and mapping of the gene, heterologous expression, and
            creation of the null allele
  JOURNAL   J Biol Chem 270 (11), 6071-6080 (1995)
   PUBMED   7890740
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02666.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..83
                     /product="phosphatidylserine decarboxylase"
                     /GO_function="GO:0004609 - phosphatidylserine
                     decarboxylase activity [Evidence IEA]"
                     /GO_process="GO:0008654 - phospholipid biosynthetic
                     process [Evidence IEA]"
                     /calculated_mol_wt=9318
     Region          <20..79
                     /region_name="PS_Dcarbxylase"
                     /note="Phosphatidylserine decarboxylase; cl03656"
                     /db_xref="CDD:470849"
ORIGIN      
        1 malkritnak inlilaitil ffvgtlnask mkfsfderiq tnvvanftqi yeyknlhikk
       61 gerlgnfelg snivilgekc nqv
//
LOCUS       WP_258030489             164 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Campylobacter
            concisus].
ACCESSION   WP_258030489
VERSION     WP_258030489.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 164)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 164)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 164)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 164)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..164
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=18416
     Region          <6..162
                     /region_name="YddA"
                     /note="ABC-type uncharacterized transport system, permease
                     and ATPase components [General function prediction only];
                     COG4178"
                     /db_xref="CDD:443337"
ORIGIN      
        1 mlnaksgagk stafrylanl wqygngeikm pkdgvmfvpq ksyltksslk elisypnena
       61 ladseiykil drvglgkfkn ldevldyaki msggekerln farvyllkpk flfldeatsa
      121 ldiasateil tnlrsdfkel gvmmithqse lfdlfdevik ikse
//
LOCUS       WP_258030507             343 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Campylobacter concisus].
ACCESSION   WP_258030507
VERSION     WP_258030507.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 343)
  AUTHORS   Das,A.K., Cohen,P.W. and Barford,D.
  TITLE     The structure of the tetratricopeptide repeats of protein
            phosphatase 5: implications for TPR-mediated protein-protein
            interactions
  JOURNAL   EMBO J 17 (5), 1192-1199 (1998)
   PUBMED   9482716
REFERENCE   2  (residues 1 to 343)
  AUTHORS   Lamb,J.R., Tugendreich,S. and Hieter,P.
  TITLE     Tetratrico peptide repeat interactions: to TPR or not to TPR?
  JOURNAL   Trends Biochem Sci 20 (7), 257-259 (1995)
   PUBMED   7667876
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019339.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07719.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..343
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=39445
     Region          64..>175
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          74..105
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(75,78..79,82..83,85,112,115..116,119..120,122..123,
                     146,149..150,153..154,157)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          110..140
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          145..169
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          301..327
                     /region_name="Rubredoxin_2"
                     /note="Rubredoxin metal binding domain; pfam18073"
                     /db_xref="CDD:436248"
ORIGIN      
        1 msvdiffigh rdpifsliil fsiilmiaal syawgifssk dekkriekfi rkfdskdgis
       61 sehkqmlqsp eidaqslcml gqtfakngdf eksisvylia lgkvrdknek efilnelgev
      121 yfkagflkka sevfekvlel sprnvlalrf ltmideklkn ykealyalns leelgvnikd
      181 qkayikaist lddrnlsfne kveilshlsq nfellkrmil alfirhnenl enlkdfarfe
      241 dvidllynlk tpinlndpky kslfyakgdi depceiygfe lnvikklkda kfdaaglsfn
      301 yvckscknsf pmhfyrcpvc helgsvkils hitekpseds ntf
//
LOCUS       WP_258030533              68 aa            linear   BCT 02-MAR-2025
DEFINITION  T7SS effector LXG polymorphic toxin, partial [Bacillus velezensis].
ACCESSION   WP_258030533
VERSION     WP_258030533.1
KEYWORDS    RefSeq.
SOURCE      Bacillus velezensis
  ORGANISM  Bacillus velezensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus amyloliquefaciens group.
REFERENCE   1  (residues 1 to 68)
  AUTHORS   Zhang,D., Iyer,L.M. and Aravind,L.
  TITLE     A novel immunity system for bacterial nucleic acid degrading toxins
            and its recruitment in various eukaryotic and DNA viral systems
  JOURNAL   Nucleic Acids Res 39 (11), 4532-4552 (2011)
   PUBMED   21306995
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016617.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04740.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Bacillus velezensis"
                     /db_xref="taxon:492670"
     Protein         1..>68
                     /product="T7SS effector LXG polymorphic toxin"
     Region          1..>68
                     /region_name="YeeF"
                     /note="Predicted ribonuclease, toxin component of the
                     YeeF-YezG toxin-antitoxin module [Defense mechanisms];
                     COG5444"
                     /db_xref="CDD:444195"
ORIGIN      
        1 mkvfeassfi saaekrakqy dqireqfinl rkafqgmadl ddsefsgkga dnikaffqdh
       61 agvtdswl
//
LOCUS       WP_258030534             503 aa            linear   BCT 02-MAR-2025
DEFINITION  HNH/ENDO VII family nuclease, partial [Bacillus velezensis].
ACCESSION   WP_258030534
VERSION     WP_258030534.1
KEYWORDS    RefSeq.
SOURCE      Bacillus velezensis
  ORGANISM  Bacillus velezensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus amyloliquefaciens group.
REFERENCE   1  (residues 1 to 503)
  AUTHORS   Zhang,D., Iyer,L.M. and Aravind,L.
  TITLE     A novel immunity system for bacterial nucleic acid degrading toxins
            and its recruitment in various eukaryotic and DNA viral systems
  JOURNAL   Nucleic Acids Res 39 (11), 4532-4552 (2011)
   PUBMED   21306995
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025768.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Bacillus velezensis"
                     /db_xref="taxon:492670"
     Protein         <1..503
                     /product="HNH/ENDO VII family nuclease"
     Region          <8..>210
                     /region_name="YeeF"
                     /note="Predicted ribonuclease, toxin component of the
                     YeeF-YezG toxin-antitoxin module [Defense mechanisms];
                     COG5444"
                     /db_xref="CDD:444195"
     Region          419..500
                     /region_name="LHH"
                     /note="A nuclease of the HNH/ENDO VII superfamily with
                     conserved LHH; pfam14411"
                     /db_xref="CDD:433940"
ORIGIN      
        1 vadagladsf veesflehel ihakntsqai mqeqrnemrd ilneisdivh ldvfstedvd
       61 qklesadkkr ddtvhklgkl dhdltkeyae teanehfiqa dfqqlqnatg kgenatplhy
      121 nakayresdi hkkkgdiekr teayltikkk eekereiekl kerlknydya dadefysmak
      181 tigyenltae qqryftqien trelmagakg tvtalydmta etldymahnh pvdmvinsav
      241 avyhydstlk sikdaiitsy vrdvkngdae stahwitcaa vnifalkgag svakigvkta
      301 gkaavkkvsk kldetpdplt aiklfvmred vvvaggvpyn vingvsakdr llqlakklde
      361 trkpftgqkv nvpwlnkeky gayevkgkvk vkgnikdvsr rvytmkdidi nqkdrkgrtn
      421 lelmkdgkap qakdgtkinl hhliqeepgn mveipnslht kysevihklk tdgesfrnnp
      481 elkvqyeyfr arywkwratq yse
//
LOCUS       WP_258030540             755 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Bacillus
            velezensis].
ACCESSION   WP_258030540
VERSION     WP_258030540.1
KEYWORDS    RefSeq.
SOURCE      Bacillus velezensis
  ORGANISM  Bacillus velezensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus amyloliquefaciens group.
REFERENCE   1  (residues 1 to 755)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Bacillus velezensis"
                     /db_xref="taxon:492670"
     Protein         <1..755
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <9..>733
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
ORIGIN      
        1 vvatsgvinp eegslsigra iantrayilg dgdqvqpegi agelcvagrg largylnree
       61 etakrftadp fvpgermyrt gdlvkwnaqs gieyigridq qvkvrgyrie lseievrlaq
      121 ladvhdaavt avedkagnta lcayvaprqd diealkaalk dtlpdymvpa fwvemdelpv
      181 tangkidkka lpepdieags aaykapetem etllsdiwqe vlgldqigvs dnfftlggds
      241 ikgiqmasrl nqhgyklemk dlfqhptiee lvsyverteg kqadqgpveg eadltpiqrw
      301 ffeknftdkh hwnqsvmlha kdgfdpdlve ktlqaliehh dalrmvyree regiiqtylp
      361 vteckasfdi vdlygtdedm lksqiqrlad hlqgsldlen gpllkaeqyr teqgdhllia
      421 vhhlvvdgvs wrilledfas gykqaqqqns ivlpqkthsf kdwaealntf aqseelkkqa
      481 dywaqadaee lrplpkdhdp nkrlvkhtaa vkcelteeet aqlltdvhhp ygteindill
      541 salgltigew tengkvginl eghgreeiip nvnisrtvgw ftaqyplilq iskedgvssv
      601 iktvketvrr vpdkgvgygi lrylssdete qgaapeisfn ylgqfdnevk tewfepspyd
      661 mgrqvseese alyalsfsgm vtggrfvisc synqeeyers tvetqmqrfk dnllmiirhc
      721 takeekeftp sdfsaqdlem demgdifdml eenlt
//
LOCUS       WP_258030576              85 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP cone domain-containing protein, partial [Campylobacter
            concisus].
ACCESSION   WP_258030576
VERSION     WP_258030576.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 85)
  AUTHORS   Aravind,L., Wolf,Y.I. and Koonin,E.V.
  TITLE     The ATP-cone: an evolutionarily mobile, ATP-binding regulatory
            domain
  JOURNAL   J Mol Microbiol Biotechnol 2 (2), 191-194 (2000)
   PUBMED   10939243
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03477.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..>85
                     /product="ATP cone domain-containing protein"
     Region          1..>85
                     /region_name="PRK08447"
                     /note="ribonucleoside-diphosphate reductase subunit alpha"
                     /db_xref="CDD:236266"
ORIGIN      
        1 mkvikrngrt eeldiskikk ytneavlgls nvslselevd akiqfrdmit ieqiqqtlik
       61 tavdkididr pnwtfvaarl flfdl
//
LOCUS       WP_258030590             205 aa            linear   BCT 02-MAR-2025
DEFINITION  pyridoxal-phosphate dependent enzyme [Campylobacter concisus].
ACCESSION   WP_258030590
VERSION     WP_258030590.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012512.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00291.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..205
                     /product="pyridoxal-phosphate dependent enzyme"
                     /calculated_mol_wt=23378
     Region          49..>204
                     /region_name="Trp-synth-beta_II"
                     /note="Tryptophan synthase beta superfamily (fold type
                     II); this family of pyridoxal phosphate (PLP)-dependent
                     enzymes catalyzes beta-replacement and beta-elimination
                     reactions. This CD corresponds to
                     aminocyclopropane-1-carboxylate deaminase (ACCD),
                     tryptophan...; cl00342"
                     /db_xref="CDD:444852"
     Site            96
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:107202"
ORIGIN      
        1 mpkficskcg ksasfetpif acecgglydl efkpakfdln lidqrefslf ryreffpikn
       61 elwrdislge gltkivkfnd slylkmdyam ptlsfkdrga vmliwfckth gikkilqdss
      121 gnagnsvaay aaragiecei yvpkgtsekk ikmleyygak avifdgtrde tadacrkrak
      181 derifyanhv fnplfyqgtk tyiyi
//
LOCUS       WP_258030588             176 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein,
            partial [Campylobacter concisus].
ACCESSION   WP_258030588
VERSION     WP_258030588.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 176)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..>176
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
     Region          <1..>176
                     /region_name="PbpC"
                     /note="Membrane carboxypeptidase/penicillin-binding
                     protein PbpC [Cell wall/membrane/envelope biogenesis];
                     COG4953"
                     /db_xref="CDD:443980"
ORIGIN      
        1 nlqkdmlkil kdamfslkak nannaaavvi dnkkmsvvaf igshdehard gknsalnmkr
       61 ntgstlkpfi yslaldsgli tpssqlidtq iyvneyvpkn fsndflglvs akdalnfsln
      121 ipvinldlkl kdnslyelle kvnlvdenke fygssivlgs aemslidlah lytiya
//
LOCUS       WP_258030626             202 aa            linear   BCT 02-MAR-2025
DEFINITION  LysE/ArgO family amino acid transporter [Campylobacter concisus].
ACCESSION   WP_258030626
VERSION     WP_258030626.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 202)
  AUTHORS   Vrljic,M., Garg,J., Bellmann,A., Wachi,S., Freudl,R., Malecki,M.J.,
            Sahm,H., Kozina,V.J., Eggeling,L., Saier,M.H. Jr., Eggeling,L. and
            Saier,M.H. Jr.
  TITLE     The LysE superfamily: topology of the lysine exporter LysE of
            Corynebacterium glutamicum, a paradyme for a novel superfamily of
            transmembrane solute translocators
  JOURNAL   J Mol Microbiol Biotechnol 1 (2), 327-336 (1999)
   PUBMED   10943564
REFERENCE   2  (residues 1 to 202)
  AUTHORS   Zakataeva,N.P., Aleshin,V.V., Tokmakova,I.L., Troshin,P.V. and
            Livshits,V.A.
  TITLE     The novel transmembrane Escherichia coli proteins involved in the
            amino acid efflux
  JOURNAL   FEBS Lett 452 (3), 228-232 (1999)
   PUBMED   10386596
REFERENCE   3  (residues 1 to 202)
  AUTHORS   Aleshin,V.V., Zakataeva,N.P. and Livshits,V.A.
  TITLE     A new family of amino-acid-efflux proteins
  JOURNAL   Trends Biochem Sci 24 (4), 133-135 (1999)
   PUBMED   10322417
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10003422
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..202
                     /product="LysE/ArgO family amino acid transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015171 - amino acid transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /calculated_mol_wt=22460
     Region          1..202
                     /region_name="ArgO"
                     /note="Arginine exporter protein ArgO [Amino acid
                     transport and metabolism]; COG1279"
                     /db_xref="CDD:440890"
ORIGIN      
        1 mqaflsgfft slslilaiga qntfvlkqgi krenifiicl icvisdalli fagvfglgsl
       61 vqnfpiikei alyggflfll fyalksfhtc ffkdlsmdts genarsnlkk nilltlaftw
      121 lnphvyldtm iligsvstkf kdenlifgvg aclasfcfff tlgylarfla pifarpiswk
      181 ileffvglim lalafmiifa sf
//
LOCUS       WP_258030661              93 aa            linear   BCT 02-MAR-2025
DEFINITION  LLM class flavin-dependent oxidoreductase [Campylobacter concisus].
ACCESSION   WP_258030661
VERSION     WP_258030661.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012517.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00296.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..93
                     /product="LLM class flavin-dependent oxidoreductase"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /calculated_mol_wt=10377
     Region          3..>68
                     /region_name="Flavin_utilizing_monoxygenases"
                     /note="Flavin-utilizing monoxygenases; cl19096"
                     /db_xref="CDD:450250"
ORIGIN      
        1 mnlsilnllp ikqgsdakda inaairlakf aediginryw vaehhnmrnl assatqliia
       61 hilehtkkps sglwrrdatk pqpllhrrav rhs
//
LOCUS       WP_258030648             129 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase [Campylobacter concisus].
ACCESSION   WP_258030648
VERSION     WP_258030648.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 129)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..129
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=14349
     Region          <1..>116
                     /region_name="OpgE"
                     /note="Phosphoethanolamine transferase for periplasmic
                     glucans OpgE, AlkP superfamily [Cell
                     wall/membrane/envelope biogenesis]; COG2194"
                     /db_xref="CDD:441797"
ORIGIN      
        1 maqkplpfty vaddatltnd kkkilvlivg etqrsknysl ngyakndtnk ftkqkdvvsf
       61 tnfyscgtat etsvpclfsd lkrenfsnre akarenlvdi inklgiktyf fsnnsggcek
      121 nrssglrqa
//
LOCUS       WP_258030757             202 aa            linear   BCT 02-MAR-2025
DEFINITION  outer membrane beta-barrel protein, partial [Campylobacter
            concisus].
ACCESSION   WP_258030757
VERSION     WP_258030757.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024895.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13505.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..202
                     /product="outer membrane beta-barrel protein"
ORIGIN      
        1 hyifkglkmk ssflkasmia cavcsfamae gafigyeggy sfasnvklse andgarlrkg
       61 qfnsgvkagy dfdsfrayga yfynfqtkke leddgekyti kwnkhsflag adytpsitsd
      121 vklvagaytg vsrikfkvdn sdsaqhstgf vlgtkfgaey lldqnnilea gvkadytfyr
      181 kieevkvres niglyvgyty kf
//
LOCUS       WP_258030740             207 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)/FAD-dependent oxidoreductase, partial [Campylobacter
            concisus].
ACCESSION   WP_258030740
VERSION     WP_258030740.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015451.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03486.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..207
                     /product="NAD(P)/FAD-dependent oxidoreductase"
     Region          <1..197
                     /region_name="YhiN"
                     /note="Predicted flavoprotein YhiN [General function
                     prediction only]; COG2081"
                     /db_xref="CDD:441684"
ORIGIN      
        1 palvgfsvqk defwfkelsg vslsadvvin tkieshkfsg dllfthrgis gpailnaslf
       61 wqkgricinf lpkfseknlv ngkkqlssvl plpkrfvlef lrnfglkdra yyefsddeks
      121 iikrlfayhf apagtfgfer aevtkggvkt ifldenlesk svkglyfige vlditgmlgg
      181 ynlhlafasa lkvasalknn qsnriei
//
LOCUS       WP_258030922             119 aa            linear   BCT 02-MAR-2025
DEFINITION  TrbG/VirB9 family P-type conjugative transfer protein, partial
            [Campylobacter concisus].
ACCESSION   WP_258030922
VERSION     WP_258030922.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 119)
  AUTHORS   Bayliss,R., Harris,R., Coutte,L., Monier,A., Fronzes,R.,
            Christie,P.J., Driscoll,P.C. and Waksman,G.
  TITLE     NMR structure of a complex between the VirB9/VirB7 interaction
            domains of the pKM101 type IV secretion system
  JOURNAL   Proc Natl Acad Sci U S A 104 (5), 1673-1678 (2007)
   PUBMED   17244707
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015487.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03524.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..>119
                     /product="TrbG/VirB9 family P-type conjugative transfer
                     protein"
     Region          <8..118
                     /region_name="VirB9"
                     /note="Type IV secretory pathway, VirB9 components
                     [Intracellular trafficking, secretion, and vesicular
                     transport]; COG3504"
                     /db_xref="CDD:442727"
     Region          67..>119
                     /region_name="VirB9_CagX_TrbG"
                     /note="VirB9/CagX/TrbG, a component of the type IV
                     secretion system; cl11423"
                     /db_xref="CDD:448249"
ORIGIN      
        1 mystdykntn dpsfviriqd devqkakqai akdesdkyki ikdgiaelkv lksdiytgyt
       61 qkakkenewl lsaeifsdkk ftyfkyakde mpqiptifav idkqdspvet rvigdyiia
//
LOCUS       WP_258030937             267 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor plug domain-containing protein
            [Campylobacter concisus].
ACCESSION   WP_258030937
VERSION     WP_258030937.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 267)
  AUTHORS   Oke,M., Sarra,R., Ghirlando,R., Farnaud,S., Gorringe,A.R.,
            Evans,R.W. and Buchanan,S.K.
  TITLE     The plug domain of a neisserial TonB-dependent transporter retains
            structural integrity in the absence of its transmembrane
            beta-barrel
  JOURNAL   FEBS Lett 564 (3), 294-300 (2004)
   PUBMED   15111112
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07715.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..267
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /calculated_mol_wt=28126
     Region          12..>233
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mrfkglfkls laasvavcan aasesvlsgv evtsssggyg vddikistrn aglakdvmrd
       61 ipgvyvggtn gmnqkiymrg vsdrglniti dgakqngntf hhnadllidp dlikaidvev
      121 gsrsvvngsg alggsvafkt vdakdllesg ekigakiktg yasnnsefsq glmlftapve
      181 gldfiaainh kgydygksgn krkiggdgnd lsyllklgys fldahrisis rehnelkefi
      241 hleqnlvagi vaqivsitas msatqqh
//
LOCUS       WP_258030973            1350 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Campylobacter
            concisus].
ACCESSION   WP_258030973
VERSION     WP_258030973.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 1350)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 1350)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 1350)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 1350)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 1350)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 1350)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 1350)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 1350)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 1350)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1350
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..1350
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=154807
     Region          329..581
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          338..455
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cl21578"
                     /db_xref="CDD:473914"
     Site            order(365,369,375,388..389,390,414,419)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(385,389,396,399..400,426)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          <820..1244
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mqknsakpvl qifkrfyvki alllfafifl alfvifagin dikyeistln litrnnivst
       61 fvevkdnitt karliangve pfyedtvvsk fytafyviak dnsllyerkf egafelhdyd
      121 iswfsdikag efrlsdrfyk nrrfkdiyia yglkngnkil vqlnqnllkn kvdtgynknl
      181 aayvflvdkd gnlsrdefyr kfikedfnky isqggefkad kiifklkdmn fykisyleeq
      241 klfvitgssr qaqifiqlvl vvlsffcfva fsilwlrdns yikdkilspf tritlfaadk
      301 skptneefdi keftslnnsi kklyedrdka yetaqsyesr fgyvfeksfl kivvfdaytg
      361 vitdisnall eklgykkddv adlnikelle desknlaedr enainnnlsy eaklrrknge
      421 iidvlatqss felentrlnf ilikditqek mtqrnddiik syvflspnvi aiasaqepfl
      481 iiqstnnvek ifnvqsqgli nlediiased fdsfkaavla skkaflqasf kneelnfian
      541 mtnaygkkip fkikakfidt egqkviysft dlsdmlklqe rfekqskesk allwaseanv
      601 ftwdkrsdml nisdelskvl gtqstlnfeq aksvfvdefd sfysffeslr daqtyikdik
      661 lysidkeilh frlrakaley defgevslik gtlrdlsled sffvcqdlla kifsfskeev
      721 vlldeemrvi dandaffesa gakdsvylkd itfikqglsd ikhqiietin qggswsgkvw
      781 sennknkskl evieilplid anekktgyim lamlanneaq nekylefiay hdpltklpnr
      841 fllynklnsl iqkneqkiav iyldmddfks indnfghqig dkflvaisek igamfngkni
      901 fariggdefv gvinyenlge vyeiaqnmlr lasdevkide lklkasasvg ialadselga
      961 ddvlqradwa myqakisgkn rsytfdakkd vyfksqyedg skilkaldag emflefqpei
     1021 sfstgetlsf ealirwrkdg eiiypsdflp liktssassn ialftikeal larkmwleng
     1081 isakvrvnls vkklftqefw qkfkaifded ksldptglii dvidaatatn levleiyvrk
     1141 ykelgihfsl ddfasysssi ealgmlktnr fnidnkfckh ifsskeales inmirfvadk
     1201 fglnttikni ddkrtlefll glgfdkfqgn ifslallakd aasfkferpy lhikdyknse
     1261 nfelfkglvv lkelanevia nlnqddklaq slkqkiedei knigkynqei sinlsklass
     1321 sdsgelynla vsiikecdin lgfskeirve
//
LOCUS       WP_258031030             152 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Campylobacter
            concisus].
ACCESSION   WP_258031030
VERSION     WP_258031030.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 152)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..152
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..140
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            37..70
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 eqmsssmnai sqktadvirq sdeikniiti irdiadqtnl lalnaaieaa ragehgrgfa
       61 vvadevrkla ertqkslgei eantnvlaqs inemsesike qseginminq svaqidhltk
      121 envvianqan svtsevdema kaiveevrkk rf
//
LOCUS       WP_258031095             490 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Campylobacter
            concisus].
ACCESSION   WP_258031095
VERSION     WP_258031095.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 490)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..490
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=54791
     Region          <32..490
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mlftapvegl dfiaainhkg ydygksgnkr kiggdgndls yllklgysfl dahrisisre
       61 hnefkglypl raefgsshan ddhrkyerdt ttlkyeykps nllnlevtay ntehkkddpv
      121 lkilgvktng inakaksive tgaltqtlry gaefyqsknf nkpnnhypek vnnysiyaed
      181 alnfssltvt pgirythhel ksydgragnv ksytykfnef tpalaldyei ikglnafasy
      241 arvfrgpdvm esmmaggsrs weankdlkpt tgnsyetglk yhgdineass ynlsakyfmt
      301 kyknlivdnn aaggrtnpim irknagradi sgvellarln ldalslaasy thqnvkykdr
      361 vakasggyyt sniigyrdqg dkytfnaeya fssidtligy nliyfasknt isasdnenvk
      421 ipsyavsdiy atyapssgkf kgleinagiy nlfnkayasq sqrtadytgd pnyvdwepgr
      481 nfkvnvsykf
//
LOCUS       WP_258031153             443 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2809 domain-containing protein [Campylobacter concisus].
ACCESSION   WP_258031153
VERSION     WP_258031153.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022443.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10990.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..443
                     /product="DUF2809 domain-containing protein"
                     /calculated_mol_wt=52460
     Region          48..129
                     /region_name="DUF2809"
                     /note="Protein of unknown function (DUF2809); pfam10990"
                     /db_xref="CDD:431585"
     Region          <161..>240
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          188..233
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
ORIGIN      
        1 mredtkkail sptdasrsey cwdarmnwam mgiailafei ciaiyakdgf iryylgdvla
       61 aamlyafwra afrlppkila lavftlslvi eitqyfkvle ilgvqnyalw iifggtfdwt
      121 diicyaigcv layvsenfig sehaiyneir ifrrkklpkk fneilqsgdd ekvkavfeiy
      181 dinatdkdgn tvlhmlhvnk dikkkgpysp yayadanlie wiimqggdin aknkkgetpl
      241 rnfmwyvykn lkphqklviv gkqdyasrey ikqagevvni dfgimynyiy nllpeksqiy
      301 iwrrfgkrle ylyvpeyptd mekydpqeys eftynfwmkf lrqkdsvqyk mihaatnlyw
      361 ywdyngeygr wnswddeytd kaaaeikkyf klgnrleeln ddaldkmfyn lrkswhaedv
      421 gklrylfvlw llknpepffe dei
//
LOCUS       WP_258030751             143 aa            linear   BCT 02-MAR-2025
DEFINITION  CiaD-like domain-containing protein [Campylobacter concisus].
ACCESSION   WP_258030751
VERSION     WP_258030751.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 143)
  AUTHORS   Gabbert,A.D., Mydosh,J.L., Talukdar,P.K., Gloss,L.M.,
            McDermott,J.E., Cooper,K.K., Clair,G.C. and Konkel,M.E.
  TITLE     The Missing Pieces: The Role of Secretion Systems in Campylobacter
            jejuni Virulence
  JOURNAL   Biomolecules 13 (1), 135 (2023)
   PUBMED   36671522
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047040.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21862.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..143
                     /product="CiaD-like domain-containing protein"
                     /calculated_mol_wt=16332
ORIGIN      
        1 mvdkimkldd iarmaisevs aelekiealq nkkqeelere nlkkellaie saneqvleep
       61 kveasepsvq iepepkvtqi lpksreisde eiflanlaer ievlfeglkq tseqelsqrl
      121 elttkfleft lanienrlqn lsk
//
LOCUS       WP_258031183             168 aa            linear   BCT 02-MAR-2025
DEFINITION  AIR synthase-related protein, partial [Campylobacter concisus].
ACCESSION   WP_258031183
VERSION     WP_258031183.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 168)
  AUTHORS   Li,C., Kappock,T.J., Stubbe,J., Weaver,T.M. and Ealick,S.E.
  TITLE     X-ray crystal structure of aminoimidazole ribonucleotide synthetase
            (PurM), from the Escherichia coli purine biosynthetic pathway at
            2.5 A resolution
  JOURNAL   Structure 7 (9), 1155-1166 (1999)
   PUBMED   10508786
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014788.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02769.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..>168
                     /product="AIR synthase-related protein"
     Region          <1..>168
                     /region_name="PRK01213"
                     /note="phosphoribosylformylglycinamidine synthase subunit
                     PurL"
                     /db_xref="CDD:234921"
ORIGIN      
        1 lervpmrevg mtpyelmlse sqermlicak kgyeqkvlei frkwdldaei igevtssgvm
       61 qlywhdelag eipigplsea apvldrpvar pkyldeianl kipnnvdnkt affkllkepe
      121 vlnksfiydq ydaniqtnti kqpgclgaas irvkgtkkav smaaqcdp
//
LOCUS       WP_258031215             155 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Campylobacter
            concisus].
ACCESSION   WP_258031215
VERSION     WP_258031215.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 155)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..155
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          1..143
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            40..73
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 aaveqmsssm naisqktadv irqsdeikni itiirdiadq tnllalnaai eaaragehgr
       61 gfavvadevr klaertqksl geieantnvl aqsinemses ikeqseginm inqsvaqidh
      121 ltkenvvian ranevtsdvd nmaktivsev rknkf
//
LOCUS       WP_258031226             128 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Campylobacter
            concisus].
ACCESSION   WP_258031226
VERSION     WP_258031226.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 128)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..128
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <3..123
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            13..46
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 kniitiirdi adqtnllaln aaieaarage hgrgfavvad evrklaertq kslgeieant
       61 nvlaqsinem sesikeqseg inminqsvaq idhltkenvv ianqanevts evdemakaiv
      121 eevrkkkf
//
LOCUS       WP_258031262             653 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Campylobacter
            concisus].
ACCESSION   WP_258031262
VERSION     WP_258031262.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 653)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..653
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=72228
     Region          39..653
                     /region_name="TonB-hemin"
                     /note="TonB-dependent heme/hemoglobin receptor family
                     protein; TIGR01785"
                     /db_xref="CDD:273807"
ORIGIN      
        1 mckrsrrevl sgvevtsssg gygvddikis trnaglakdv mrdipgvyvg gtngmnqkiy
       61 mrgvsdrgln itidgakqng ntfhhnadll idpdlikaid vevgsrsvvn gsgalggsva
      121 fktvdakdll esgekigaki ktgyasnnse fsqglmlftt pvegldfiaa inhkgydygk
      181 sgnkrkiggd gndlsyllkl gysfldahri sisrehnefk gmypmraefg swytgdypvd
      241 nrkyerdttt lkyeykpsdl lnldvtvynt ehkkddpvlk ilgvktngin akaksvvesg
      301 altqtfryga efyqsknfnk pdnhypekvn nysiyaedal nfssltvtpg irythhelks
      361 ydgragnvks ytykyneftp alaldyeilk glnafasyar vfrgpdvmes myasraenfe
      421 ankdlkattg nsyetglkyh gdineassys lsakyfmtky knlivdngsy vtgtppneit
      481 iyrrinagga disgvellar lnldalslaa sythqnvkyk drvvntstgg yyasnvigyr
      541 dqgdkytfna eyafsridtl igynliyfas kntvsagndk sakipsyavs diyatyapss
      601 gkfkgleina giynlfnkty asqsqrmady tgdpnyvdwe pgrnfkvnvs ykf
//
LOCUS       WP_258031327             595 aa            linear   BCT 02-MAR-2025
DEFINITION  biotin/lipoyl-containing protein [Campylobacter concisus].
ACCESSION   WP_258031327
VERSION     WP_258031327.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012584.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00364.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..595
                     /product="biotin/lipoyl-containing protein"
                     /calculated_mol_wt=64749
     Region          2..558
                     /region_name="OadA1"
                     /note="Pyruvate/oxaloacetate carboxyltransferase [Energy
                     production and conversion]; COG5016"
                     /db_xref="CDD:444040"
     Region          529..594
                     /region_name="biotinyl_domain"
                     /note="The biotinyl-domain or biotin carboxyl carrier
                     protein (BCCP) domain is present in all biotin-dependent
                     enzymes, such as acetyl-CoA carboxylase, pyruvate
                     carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA
                     carboxylase, geranyl-CoA carboxylase; cd06850"
                     /db_xref="CDD:133459"
     Site            order(551,560..562,569)
                     /site_type="active"
                     /note="carboxyltransferase (CT) interaction site [active]"
                     /db_xref="CDD:133459"
     Site            561
                     /site_type="other"
                     /note="biotinylation site [posttranslational
                     modification]"
                     /db_xref="CDD:133459"
ORIGIN      
        1 mdvmdttfrd gfqsvygarv lmndflpale aakgagiehf efgggarfqs lyfylnedaf
       61 ammdkfrsiv gpkanlqtls rgvntvtldt gsrelidlha klfkkhgttt irnfdalndv
      121 enlkysgeri ahhglkhevv vtmmdlpsgc vgahdvkfye kilreildan ipyhsvcfkd
      181 asgtsspqkv yetikmarkl lpekthirlh thetagvsva cylaaleagv dgidlaaspv
      241 sggtsqpdil tmlhavkgkn ydlggldvek ilkyesvlnd clkeyflppe avqvsplipf
      301 spmpggalta ntqmmrdnni ldkfpevila mrevvqkggy gtsvtpvsqf yfqqafnnvm
      361 fgkwkkiaeg ygkmvlgyfg ktpvtpdkei iklaseqlgl kpttkhavdi adkdesksla
      421 hvkeilkqnk ikvteenvfi aaackekgia flkgeakvnv rkvdpnakan egrqtqsgry
      481 svvvngsryn vevsegfnds iqvksiteve gksvtsaksa aagatendiv aslpgavhki
      541 lvsvgdhvkk gqaivvleam kmeievkapk dgiigsievs kgqsiannqv varfk
//
LOCUS       WP_258031312              52 aa            linear   BCT 02-MAR-2025
DEFINITION  pyruvate kinase, partial [Campylobacter concisus].
ACCESSION   WP_258031312
VERSION     WP_258031312.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 52)
  AUTHORS   Yuan,M., McNae,I.W., Chen,Y., Blackburn,E.A., Wear,M.A.,
            Michels,P.A.M., Fothergill-Gilmore,L.A., Hupp,T. and
            Walkinshaw,M.D.
  TITLE     An allostatic mechanism for M2 pyruvate kinase as an amino-acid
            sensor
  JOURNAL   Biochem J 475 (10), 1821-1837 (2018)
   PUBMED   29748232
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 52)
  AUTHORS   Munoz,M.E. and Ponce,E.
  TITLE     Pyruvate kinase: current status of regulatory and functional
            properties
  JOURNAL   Comp Biochem Physiol B Biochem Mol Biol 135 (2), 197-218 (2003)
   PUBMED   12798932
REFERENCE   3  (residues 1 to 52)
  AUTHORS   Valentini,G., Chiarelli,L.R., Fortin,R., Dolzan,M., Galizzi,A.,
            Abraham,D.J., Wang,C., Bianchi,P., Zanella,A. and Mattevi,A.
  TITLE     Structure and function of human erythrocyte pyruvate kinase.
            Molecular basis of nonspherocytic hemolytic anemia
  JOURNAL   J Biol Chem 277 (26), 23807-23814 (2002)
   PUBMED   11960989
REFERENCE   4  (residues 1 to 52)
  AUTHORS   Larsen,T.M., Benning,M.M., Wesenberg,G.E., Rayment,I. and Reed,G.H.
  TITLE     Ligand-induced domain movement in pyruvate kinase: structure of the
            enzyme from rabbit muscle with Mg2+, K+, and L-phospholactate at
            2.7 A resolution
  JOURNAL   Arch Biochem Biophys 345 (2), 199-206 (1997)
   PUBMED   9308890
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012449.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00224.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..52
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..>52
                     /product="pyruvate kinase"
                     /GO_function="GO:0000287 - magnesium ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0004743 - pyruvate kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0030955 - potassium ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006096 - glycolytic process [Evidence
                     IEA]"
     Region          1..>52
                     /region_name="PykF"
                     /note="Pyruvate kinase [Carbohydrate transport and
                     metabolism]; COG0469"
                     /db_xref="CDD:440237"
ORIGIN      
        1 mykktkivat lgpasenlet mremvkngvn vfrlnfshgt heyheanlnk ir
//
LOCUS       WP_258031357             135 aa            linear   BCT 02-MAR-2025
DEFINITION  PDC sensor domain-containing protein [Campylobacter concisus].
ACCESSION   WP_258031357
VERSION     WP_258031357.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 135)
  AUTHORS   Upadhyay,A.A., Fleetwood,A.D., Adebali,O., Finn,R.D. and
            Zhulin,I.B.
  TITLE     Cache Domains That are Homologous to, but Different from PAS
            Domains Comprise the Largest Superfamily of Extracellular Sensors
            in Prokaryotes
  JOURNAL   PLoS Comput Biol 12 (4), e1004862 (2016)
   PUBMED   27049771
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 135)
  AUTHORS   Zhang,Z. and Hendrickson,W.A.
  TITLE     Structural characterization of the predominant family of histidine
            kinase sensor domains
  JOURNAL   J Mol Biol 400 (3), 335-353 (2010)
   PUBMED   20435045
REFERENCE   3  (residues 1 to 135)
  AUTHORS   Cheung,J., Bingman,C.A., Reyngold,M., Hendrickson,W.A. and
            Waldburger,C.D.
  TITLE     Crystal structure of a functional dimer of the PhoQ sensor domain
  JOURNAL   J Biol Chem 283 (20), 13762-13770 (2008)
   PUBMED   18348979
REFERENCE   4  (residues 1 to 135)
  AUTHORS   Anantharaman,V. and Aravind,L.
  TITLE     Cache - a signaling domain common to animal Ca(2+)-channel subunits
            and a class of prokaryotic chemotaxis receptors
  JOURNAL   Trends Biochem Sci 25 (11), 535-537 (2000)
   PUBMED   11084361
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 13036975
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..135
                     /product="PDC sensor domain-containing protein"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=15078
     Region          60..>135
                     /region_name="PDC1_HK_sensor"
                     /note="first PDC (PhoQ/DcuS/CitA) domain of
                     methyl-accepting chemotaxis proteins, diguanylate-cyclase
                     and similar domains; cd18773"
                     /db_xref="CDD:350341"
ORIGIN      
        1 mfrsitnkia lalmilliis fcaisavsyf tskdkivelv sgkedqvlkd iksvantffd
       61 enlehikkis svvesaqsgd eimnfvlsek kvansavsyi yygdedghff qsdgkrttva
      121 dnydprtrgw ykstk
//
LOCUS       WP_258031332              94 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Campylobacter
            concisus].
ACCESSION   WP_258031332
VERSION     WP_258031332.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 94)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..94
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..87
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
ORIGIN      
        1 favvadevrk laertqkslg eieantnvla qsinemsesi keqseginmi nqsvaqidhl
       61 tkenvvianq anevttevde makaiveevr kkrf
//
LOCUS       WP_258031344             122 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase domain-containing protein, partial
            [Campylobacter concisus].
ACCESSION   WP_258031344
VERSION     WP_258031344.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 122)
  AUTHORS   Xiong,Y. and Eickbush,T.H.
  TITLE     Origin and evolution of retroelements based upon their reverse
            transcriptase sequences
  JOURNAL   EMBO J 9 (10), 3353-3362 (1990)
   PUBMED   1698615
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00078.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..122
                     /product="reverse transcriptase domain-containing protein"
     Region          <1..96
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 ivlsyadlcl saklkhidkk dfyilryrdd yrifvnspqi adeiikmlte vlidlglkln
       61 sskttfsnnv iqssikpdkl dwlvvdkdlk tiqkrlllih qfalknpnsg tlvkelqais
      121 kk
//
LOCUS       WP_258031363             146 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Campylobacter concisus].
ACCESSION   WP_258031363
VERSION     WP_258031363.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 146)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..146
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=15862
     Region          <3..135
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            31..64
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 mnaisqktgd virqsdeikn iiviirdiad qtnllalnaa ieaaragehg rgfavvadev
       61 rklaertqks lgeieantnv laqsinemse sikeqaegin minrsvaqid nvtkenrsvv
      121 sntndvtsei dsmakviltd vrknkf
//
LOCUS       WP_258031378             131 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Campylobacter concisus].
ACCESSION   WP_258031378
VERSION     WP_258031378.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024170.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12760.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..131
                     /product="transposase"
                     /calculated_mol_wt=14790
     Region          25..>118
                     /region_name="InsA"
                     /note="Transposase InsA [Mobilome: prophages,
                     transposons]; COG3677"
                     /db_xref="CDD:442893"
ORIGIN      
        1 msqhfllssk artisvrkia smsenecyey fksirwssnk gnpicpicgs asshyfiesr
       61 lqyrckdcfh tfsvtsgtif hshkldfkvi llaivifsna tkgisalqls rdldvnikrl
      121 gfylikseka l
//
LOCUS       WP_258031379             202 aa            linear   BCT 02-MAR-2025
DEFINITION  LysE/ArgO family amino acid transporter [Campylobacter concisus].
ACCESSION   WP_258031379
VERSION     WP_258031379.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 202)
  AUTHORS   Vrljic,M., Garg,J., Bellmann,A., Wachi,S., Freudl,R., Malecki,M.J.,
            Sahm,H., Kozina,V.J., Eggeling,L., Saier,M.H. Jr., Eggeling,L. and
            Saier,M.H. Jr.
  TITLE     The LysE superfamily: topology of the lysine exporter LysE of
            Corynebacterium glutamicum, a paradyme for a novel superfamily of
            transmembrane solute translocators
  JOURNAL   J Mol Microbiol Biotechnol 1 (2), 327-336 (1999)
   PUBMED   10943564
REFERENCE   2  (residues 1 to 202)
  AUTHORS   Zakataeva,N.P., Aleshin,V.V., Tokmakova,I.L., Troshin,P.V. and
            Livshits,V.A.
  TITLE     The novel transmembrane Escherichia coli proteins involved in the
            amino acid efflux
  JOURNAL   FEBS Lett 452 (3), 228-232 (1999)
   PUBMED   10386596
REFERENCE   3  (residues 1 to 202)
  AUTHORS   Aleshin,V.V., Zakataeva,N.P. and Livshits,V.A.
  TITLE     A new family of amino-acid-efflux proteins
  JOURNAL   Trends Biochem Sci 24 (4), 133-135 (1999)
   PUBMED   10322417
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10003422
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..202
                     /product="LysE/ArgO family amino acid transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015171 - amino acid transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /calculated_mol_wt=22385
     Region          1..202
                     /region_name="ArgO"
                     /note="Arginine exporter protein ArgO [Amino acid
                     transport and metabolism]; COG1279"
                     /db_xref="CDD:440890"
ORIGIN      
        1 mqafisgffi slslilaiga qnafvlkqgi krenifiicl icaisdavli fagvfglgsl
       61 vqnfpiikqi alyggflfll fyalksfhsc ffkdlsmdts senarsnlkk nilltlaftw
      121 lnphvyldtm iligsvstkf kdenlifgvg aslasfcfff tlgylarfla pifarpiswk
      181 ileffvglvm lalafmllfa sf
//
LOCUS       WP_258031173             141 aa            linear   BCT 02-MAR-2025
DEFINITION  NADP-dependent isocitrate dehydrogenase, partial [Campylobacter
            concisus].
ACCESSION   WP_258031173
VERSION     WP_258031173.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   Eikmanns,B.J., Rittmann,D. and Sahm,H.
  TITLE     Cloning, sequence analysis, expression, and inactivation of the
            Corynebacterium glutamicum icd gene encoding isocitrate
            dehydrogenase and biochemical characterization of the enzyme
  JOURNAL   J Bacteriol 177 (3), 774-782 (1995)
   PUBMED   7836312
REFERENCE   2  (residues 1 to 141)
  AUTHORS   Ishii,A., Suzuki,M., Sahara,T., Takada,Y., Sasaki,S. and
            Fukunaga,N.
  TITLE     Genes encoding two isocitrate dehydrogenase isozymes of a
            psychrophilic bacterium, Vibrio sp. strain ABE-1
  JOURNAL   J Bacteriol 175 (21), 6873-6880 (1993)
   PUBMED   8226630
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015904.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03971.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..>141
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /EC_number="1.1.1.42"
                     /GO_function="GO:0004450 - isocitrate dehydrogenase
                     (NADP+) activity [Evidence IEA]"
                     /GO_process="GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
     Region          2..>140
                     /region_name="IDH"
                     /note="Monomeric isocitrate dehydrogenase; cl15383"
                     /db_xref="CDD:472797"
ORIGIN      
        1 maafndklpp dlrvsddlem lrnltqekra niiklpnisa slpqlnaait elrakgydlp
       61 pypsepktpe ekdaaaryak vlgsavkpvl regnsdrrcv gavkryaren pykitpfekd
      121 sktevaymkg gdfyssecsi s
//
LOCUS       WP_258031427             186 aa            linear   BCT 02-MAR-2025
DEFINITION  putative peptidoglycan-binding domain-containing protein
            [Campylobacter concisus].
ACCESSION   WP_258031427
VERSION     WP_258031427.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     COG3926 and COG5526: a tale of two new lysozyme-like protein
            families
  JOURNAL   Protein Sci 14 (10), 2574-2581 (2005)
   PUBMED   16155206
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020931.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09374.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..186
                     /product="putative peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=21238
     Region          33..183
                     /region_name="ZliS"
                     /note="Lysozyme family protein [General function
                     prediction only]; COG3926"
                     /db_xref="CDD:443130"
ORIGIN      
        1 mnytnytqaf nllmslefsr pkkalhknpt engltfmgiy eaahpnwqgw gqvraainay
       61 gdlekasial ynddaliekv kifykkefwd kmrldevdsg lkacelfvfg vnvdtvpavr
      121 vlqrllgvva dgimgaqtlk alnnyderaf dsdfdraeia yyrnlirknp rlgvyeqgwe
      181 nrakki
//
LOCUS       WP_258031431             222 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding protein [Campylobacter concisus].
ACCESSION   WP_258031431
VERSION     WP_258031431.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 222)
  AUTHORS   Mittl,P.R. and Schulz,G.E.
  TITLE     Structure of glutathione reductase from Escherichia coli at 1.86 A
            resolution: comparison with the enzyme from human erythrocytes
  JOURNAL   Protein Sci 3 (5), 799-809 (1994)
   PUBMED   8061609
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013086.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00890.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..222
                     /product="FAD-binding protein"
                     /calculated_mol_wt=24361
     Region          <1..217
                     /region_name="flavo_cyto_c"
                     /note="flavocytochrome c; TIGR01813"
                     /db_xref="CDD:273816"
ORIGIN      
        1 mmlavgatpi qlslgrysfg iptedlvfsm ivdgknskrf mnedgdrqgl sdkilenmqd
       61 nnsdkfavii fdevgfgssh dpkrlnkfve dgkmkkfqnl delakefgln levlnseikr
      121 yneniekkdd sdfkkdlskv npilkapfyg mlaapgisyt pggvrvslnf evlglkdnmp
      181 iknlyaigea tggihgyarl tscstpdcis sgliaaehil ka
//
LOCUS       WP_258031397             144 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Campylobacter
            concisus].
ACCESSION   WP_258031397
VERSION     WP_258031397.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 144)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..144
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <12..132
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            29..62
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 aisqktadvi rqsdeiknii tiirdiadqt nllalnaaie aaragehgrg favvadevrk
       61 laertqkslg eieantnvla qsinemsesi keqseginmi nqsvaqidhl tkenvvianq
      121 anevtsevde makaivedvr knkf
//
LOCUS       WP_258031478             582 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Campylobacter concisus].
ACCESSION   WP_258031478
VERSION     WP_258031478.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 582)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 582)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019348.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07728.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..582
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=68283
     Region          8..>104
                     /region_name="XerD"
                     /note="Site-specific recombinase XerD [Replication,
                     recombination and repair]; COG4974"
                     /db_xref="CDD:443999"
     Region          101..>122
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Region          <272..542
                     /region_name="McrB"
                     /note="5-methylcytosine-specific restriction endonuclease
                     McrBC, GTP-binding regulatory subunit McrB [Defense
                     mechanisms]; COG1401"
                     /db_xref="CDD:441011"
ORIGIN      
        1 mfefidydgf qdycdknkym enssvkayhs ylknfisfle dnkiysftdy dnadikyleq
       61 eftktgrneq tfnkymraln yyrdfkkgkv etmpttnkei qkrqinfsln qilygppgtg
      121 ktyklsktmd kftqnlnvks sgdtdalyem lkienytwyq vaaailydaa isntnggwlk
      181 lnngivnhil fklksirsgs ktpiqtissd llfhtkmdce yvktqerrap fifeknekse
      241 whvdikilnd ecpeaielye kykeikdkkv gtsytkenfk fitfhqsygy eefvegikpi
      301 fnsenedgdi tyeiskgify qccenallls dykgklrdfc dmpkyerqkf fnentpkyai
      361 fideinrgni skifgelitl iepskrlgad deimvelpys kekfgvpsnl yiigtmntad
      421 rsialmdtal rrrfefvemm peydtlneti ieginvgeml ktinerieyl ydrdhtigha
      481 yfinvsdlkt lanvfknkil pllqeyfydd wekirlvlgd sqkdenlqlv kikrnmaaer
      541 lfigkidyid dkilyeinse afnnpqsyie iyknatksdn an
//
LOCUS       WP_258031516             343 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Campylobacter concisus].
ACCESSION   WP_258031516
VERSION     WP_258031516.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024573.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13175.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..343
                     /product="AAA family ATPase"
                     /calculated_mol_wt=39547
     Region          2..343
                     /region_name="COG4938"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443965"
     Region          5..>123
                     /region_name="AAA_23"
                     /note="AAA domain; pfam13476"
                     /db_xref="CDD:463890"
ORIGIN      
        1 miqqmkisnf ksinnqeiel kpltiftgtn ssgkttlmqs illlsyysnq nselekalik
       61 vkkfqeirnf nnnsneatlq ikmddgeyil kcdsnsnwvi nkksplvfed nlyyissnri
      121 gqediatyse nikfgingkn vfgffqkykd qivsfvadhn ndetlsgnlk ywikkildld
      181 ielytedidg snikagykss litsnilstf nvgtgvsyvv rilivalwlk pnnifmienp
      241 eihlhpkais nlasffaeiv sknkvqliie thseyflhkl ryeiykrkfn andvrffykd
      301 dpnkefeiid inenghlvnf kkekinfptg fldvslgell eim
//
LOCUS       WP_258031455            1350 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Campylobacter
            concisus].
ACCESSION   WP_258031455
VERSION     WP_258031455.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 1350)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 1350)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 1350)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 1350)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 1350)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 1350)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 1350)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 1350)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 1350)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1350
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..1350
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=155000
     Region          329..581
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          338..455
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cl21578"
                     /db_xref="CDD:473914"
     Site            order(365,369,375,388..389,390,414,419)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(385,389,396,399..400,426)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          <820..1244
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mqknsvksil qifkrfyvki alllfafifl alfvifagin dikyeistln litknnitna
       61 fsdvkdnist karliangie pfyentiisk fyaafyviak dnsllyerkf dsafdlhdyd
      121 iawfsdikeg efrlsdrfyk nrrfkdiyia yglkngnkil vqlsqnflkn rvdtsynknf
      181 gayvflvdkd gnlsrdefyk kfikedfnky isqggefksd kiifmlkdmn fykisyleeq
      241 klfvitgssr qlqifiqlvl vvlsffcfva fsilwlrdns ymkdkilsaf tritlfatdk
      301 skptdedfdv kefillnnsi kklyedrdka yetaqsyesr fgyvfeksfl kivvfdaytg
      361 vitdisnall eklgykkddv adlnikelle desknlaedr knainnnlsy eaklrrknge
      421 iidvlvtqss felentrlnf ilikditqek mtqknddiik syvilspnvi aiasanepfl
      481 iiqstnnver ifnvqsqsli nlediiased fdsfkaavla skkaflqasf kneelnfian
      541 mtnaygkkip fkikakfida deqkiiysft dlsdmlklqe rfekqskesk allwaseanv
      601 ftwdkrsdml nisdelskil gtqstlnfeq aksvfvdefd sfysffesir daqtyikdik
      661 lysidkeilh frlrakaley defgevslik gtlkdlsled sffvcqdlla kifsfskeev
      721 illdeelkvi dandtffesa gskdsvylkd itfikqglsd ikhqiidtin sggswsgkvw
      781 sennknkskl evieilplid asekrtgyim lamlanneaq nekylefiay hdpltklpnr
      841 fllynklnsl iqkneqkiav iyldiddfkg indnfghqig dkflvaisek igamfngkni
      901 fariggdefv gvinyenlge vyeiaqnmlr lasdevkide lklkasasvg ialadselga
      961 ddvlqradwa myqakisgkn rsytfdakkd vyfksqyedg skilkaldag emflefqpei
     1021 sfstgetlsf ealirwrkdg eiiypsdflp lirtssassn ialftikeal larkmwleng
     1081 inakvrvnls vkklftqefw hkfkaifded ksldptglii dvidaatatn levleiyvrk
     1141 ykelgihfsl ddfasysssi ealgmlktnr fnidnkfckh ifnskeales inmirfvadk
     1201 fglnatikni ddkrtlefll glgfdkfqgn ifslallakd aasfkferpy lhikdyknse
     1261 nfelfkglvv lkelanevia nlnqddkltq slkqkiedei knigkfnqei sinlsklass
     1321 sdsgelynla vsiikecdin lgfskeirve
//
LOCUS       WP_258031520             201 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)/FAD-dependent oxidoreductase, partial [Campylobacter
            concisus].
ACCESSION   WP_258031520
VERSION     WP_258031520.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015451.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03486.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..201
                     /product="NAD(P)/FAD-dependent oxidoreductase"
     Region          <2..198
                     /region_name="YhiN"
                     /note="Predicted flavoprotein YhiN [General function
                     prediction only]; COG2081"
                     /db_xref="CDD:441684"
ORIGIN      
        1 apalvgfsvq kdefwfkels gislsadvvi ntkneshkfs gdllfthrgi sgpailnasl
       61 fwqkgricin flpkfseknl vngkkqlgsv lplpkrfvle flrnfglkdr afyefsddek
      121 niikrlfayh fapagtfgfe raevtkggvk tnflnenles ksvkglyfig evlditgmlg
      181 gynlhfafas alkvasalkn s
//
LOCUS       WP_258031530            1349 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Campylobacter
            concisus].
ACCESSION   WP_258031530
VERSION     WP_258031530.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 1349)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 1349)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 1349)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 1349)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 1349)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 1349)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 1349)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 1349)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 1349)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1349
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..1349
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=155226
     Region          329..580
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          338..455
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cl21578"
                     /db_xref="CDD:473914"
     Site            order(365,369,375,388..389,390,414,419)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(385,389,396,399..400,426)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          <819..1243
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mqknsakpvl qifkrfyvki alllfafifl alfvifagin dikyeistln fitrnnivst
       61 fadvkdnist karlikngie pfnddsntsk fyaafyviak dnsllyqrkf egafelhnyd
      121 iswfsdikeg efrlsdrfyk nkrfkdiyia yglkngnkil iqlnpnllkk kvdtgynknf
      181 aayvflvdkd gnlsrdefyr kfikedfnky isqggefktd kiifilkdmn fykisyleeq
      241 klfvitgssr qvqifiqlvl vvlsflcfva fsilwlrdns yikdkilspf irialfavdk
      301 skptdekfdi kefislnnsi kklyedrdka yetaqsyesr fgyvfeksfl kivvfdaytg
      361 vitdisnall enlgykkddv adlnikelie desknlaedr enainnnlyy eaklrrknge
      421 iidvlatqss felentrlnf ilikditqek itqrnddiik syvflspnvi aiasaqepfl
      481 iiqstnniek ifnvqsqgli nlediiased fdsfkaamla nkkaflqtsk neelnfianm
      541 tnaygkkipf rirakfidae wqkviysftd lsdmlklqer fekqskeska llwaseanvf
      601 twdkrsdmln isdelskilg tqstlnfeqa ksvfvdefds fysffeslrd aqtyikdikl
      661 ysidkeilhf rlrakaleyd efgevslikg tlrdlsleds fficqdllak ifsfskeevv
      721 lldeemrvid andaffesag akdsvylkyi tfikqglsdi khqiietinq ggswsgkvws
      781 ennknkskle vieilplida nekrtgyiml amlanneaqn ekylefiayh dpltklpnrf
      841 llynklnsli qkneqkiavi yldmddfksi ndnfghqigd kflvaiseki gamfngknif
      901 ariggdefvg vinyenlgev yeiaqnmlrl asdevkidel klkastsigi aladselgad
      961 dvlqradwam yqakisgknr sytfdakkdv yfksqyedgs kilkaldage mflefqpeis
     1021 fstgetlsfe alirwrknge iiypsdflpl iktssassni alftikeall arkmwlengi
     1081 sakvrvnlsv kklfteefwh kfkaifeedk sldptgliid vidaatatnl evleiyvrky
     1141 kelgihfsld dfasysssie algmlktnrf nidnkfckhi fsskealesi nmirfvadkf
     1201 glnatiknid dkrtlefllg lgfdkfqgni fslallakda asfkferpyl hikdyknnen
     1261 feifkglvvl kelanevian lnqddkltqs lkqkiedeik nigkfnqeis inlsklasss
     1321 dsgelynlam siikecdinl gfskeirve
//
LOCUS       WP_258031620            1350 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Campylobacter
            concisus].
ACCESSION   WP_258031620
VERSION     WP_258031620.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 1350)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 1350)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 1350)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 1350)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 1350)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 1350)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 1350)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 1350)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 1350)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1350
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..1350
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=154790
     Region          329..581
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          338..455
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cl21578"
                     /db_xref="CDD:473914"
     Site            order(365,369,375,388..389,390,414,419)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(385,389,396,399..400,426)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          <820..1244
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mqknsakpvl qifkrfyvki alllfafifl alfvifagin dikyeistln litrnnivst
       61 fvevkdnitt karliangve pfyedtvvsk fyaafyviak dnsllyerkf egafelhnyd
      121 iswfsdikag efrlsdrfyk nrrfkdiyia yglkngnkil vqlnqnllkn rvdtgynknl
      181 aayvflvdkd gnlsrdefyr kfikedfnky isqggefkad kiifilkdmn fykisyleeq
      241 klfvitgssr qaqifiqlvl vvlsflcfva fsilwlrdns yikdkilspf tritlfaadk
      301 skltneefdi kefislnnsi kklyedrdka yetaqsyesr fgyvfeksfl kivvydaytg
      361 vitdisnall enlgykkddv adlnikelle desknlaenr enainndlsy eaklrrknge
      421 iidvlatqss felentrlnf ilikditqek mtqrnddiik syvflspnvi aiasaqepfl
      481 iiqstnnver ifnvqsqgli nlediiased fdsfkaavla skkaflqasf kneelnfian
      541 mtnsygkkip fkikakfida egqkviysft dlsdmlklqe rfekqskesk allwaseanv
      601 ftwdkrsdml nisdelskil gtqstlnfeq aksvfvdefd sfysffeslr daqtyikdik
      661 lysidkeilh frlrakaley defgevslik gtlrdlsled sffvcqdlla kifsfskeev
      721 vlldeemrvi dandaffesa gakdsvylkd itfikqglsd ikhqiietin qggswsgkvw
      781 sennknkskl evieilplid anekktgyim lamlanneaq nekylefiay hdpltklpnr
      841 fllynklnsl iqkneqkiav iyldmddfks indnfghqig dkflvaisek igamfngkni
      901 fariggdefv gvinyenlge vyeiaqnmlr lasdevkide lklkasasvg ialadselga
      961 ddvlqradwa myqakisgkn rsytfdakkd vyfksqyedg skilkaldag emflefqpei
     1021 sfstgetlsf ealirwrkdg eiiypsdflp liktssassn ialftikeal larkmwleng
     1081 isakvrvnls vkklfteefw hkfkaifded ksldptglii dvidaatatn levleiyvrk
     1141 ykelgihfsl ddfasysssi ealgmlktnr fnidnkfckh ifnskeales inmirfvadk
     1201 fglnatikni ddkrtlefll glgfdkfqgn ifslallakd aasfkferpy lhikdyknse
     1261 nfelfkglvv lkelanevia nlnqddklaq slkqkiedei knigkfnqei svnlsklass
     1321 sdsgelynla vsiikecdin lgfskeirve
//
LOCUS       WP_258031688             252 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase [Campylobacter concisus].
ACCESSION   WP_258031688
VERSION     WP_258031688.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 252)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..252
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=28468
     Region          1..251
                     /region_name="OpgE"
                     /note="Phosphoethanolamine transferase for periplasmic
                     glucans OpgE, AlkP superfamily [Cell
                     wall/membrane/envelope biogenesis]; COG2194"
                     /db_xref="CDD:441797"
ORIGIN      
        1 mqtygviidk gmllnalhtd treafsyfna slaiwlifat ilpcvyvali eisyggfksa
       61 lrsrvkialc tlvsaaiifa lmskilyhfl kshnastisv llpyypiyyk gypskfkeft
      121 ptcdtaelnk ctpdeianty dntilyedyl qselinalea rkdkfevamf ffsdhgeslg
      181 engiylhglp ysiapdeqkh ipaiifssds ellkrlkakk deslshdfvf ssvlgyfgvk
      241 tkayepefdi fr
//
LOCUS       WP_258031693              65 aa            linear   BCT 02-MAR-2025
DEFINITION  tannase/feruloyl esterase family alpha/beta hydrolase
            [Campylobacter concisus].
ACCESSION   WP_258031693
VERSION     WP_258031693.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 65)
  AUTHORS   de Vries,R.P., vanKuyk,P.A., Kester,H.C. and Visser,J.
  TITLE     The Aspergillus niger faeB gene encodes a second feruloyl esterase
            involved in pectin and xylan degradation and is specifically
            induced in the presence of aromatic compounds
  JOURNAL   Biochem J 363 (Pt 2), 377-386 (2002)
   PUBMED   11931668
REFERENCE   2  (residues 1 to 65)
  AUTHORS   Hatamoto,O., Watarai,T., Kikuchi,M., Mizusawa,K. and Sekine,H.
  TITLE     Cloning and sequencing of the gene encoding tannase and a
            structural study of the tannase subunit from Aspergillus oryzae
  JOURNAL   Gene 175 (1-2), 215-221 (1996)
   PUBMED   8917102
  REMARK    Erratum:[Gene 1997 Feb 20;186(1):153]
REFERENCE   3  (residues 1 to 65)
  AUTHORS   Kroon,P.A., Faulds,C.B. and Williamson,G.
  TITLE     Purification and characterization of a novel esterase induced by
            growth of Aspergillus niger on sugar-beet pulp
  JOURNAL   Biotechnol Appl Biochem 23 (3), 255-262 (1996)
   PUBMED   8679110
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019157.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07519.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..65
                     /product="tannase/feruloyl esterase family alpha/beta
                     hydrolase"
                     /calculated_mol_wt=6815
ORIGIN      
        1 mwsesgngid dvgpleawhe kgeapksmla ksktyagkef lvcaypkvat yvggdaskac
       61 sfvck
//
LOCUS       WP_258031743              75 aa            linear   BCT 02-MAR-2025
DEFINITION  replication/maintenance protein RepL [Campylobacter concisus].
ACCESSION   WP_258031743
VERSION     WP_258031743.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 75)
  AUTHORS   Hefford,M.A., Kobayashi,Y., Allard,S.E., Forster,R.J. and
            Teather,R.M.
  TITLE     Sequence analysis and characterization of pOM1, a small cryptic
            plasmid from Butyrivibrio fibrisolvens, and its use in construction
            of a new family of cloning vectors for Butyrivibrios
  JOURNAL   Appl Environ Microbiol 63 (5), 1701-1711 (1997)
   PUBMED   9143105
REFERENCE   2  (residues 1 to 75)
  AUTHORS   Lampson,B.C. and Parisi,J.T.
  TITLE     Nucleotide sequence of the constitutive
            macrolide-lincosamide-streptogramin B resistance plasmid pNE131
            from Staphylococcus epidermidis and homologies with Staphylococcus
            aureus plasmids pE194 and pSN2
  JOURNAL   J Bacteriol 167 (3), 888-892 (1986)
   PUBMED   3091582
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017542.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05732.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..75
                     /product="replication/maintenance protein RepL"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /GO_process="GO:0006276 - plasmid maintenance [Evidence
                     IEA]"
                     /calculated_mol_wt=8644
     Region          7..>72
                     /region_name="HTH_ARSR"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; cl46857"
                     /db_xref="CDD:481197"
     Site            order(7..8,12..14,34..36,45..48,50..51,54..55,57..58,
                     64..66,71..72)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238042"
ORIGIN      
        1 mkeqiykall gekkveiinl lcelsdengf ivlkiseice klnvskptvi stfrlleekk
       61 ifervkngvy rfknl
//
LOCUS       WP_258031815             146 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Campylobacter concisus].
ACCESSION   WP_258031815
VERSION     WP_258031815.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 146)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..146
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=15832
     Region          <3..135
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            31..64
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 mnaisqktgd virqsdeikn iiviirdiad qtnllalnaa ieaaragehg rgfavvadev
       61 rklaertqks lgeieantnv laqsinemse sikeqaegin minrsvaqid nvtkenrsvv
      121 sntndvtsei dgmakviltd vrknkf
//
LOCUS       WP_258031834             275 aa            linear   BCT 02-MAR-2025
DEFINITION  M28 family peptidase [Campylobacter concisus].
ACCESSION   WP_258031834
VERSION     WP_258031834.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016289.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04389.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..275
                     /product="M28 family peptidase"
                     /calculated_mol_wt=29888
     Region          4..>230
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mskseilkkf etlaaiphcs yetdkmrdfl asyakdkgce vavdsfgnih afkgkpkicl
       61 qshydmvcmg dapkieivyg ddgymrakns slgadngigv aimmqmisef ddieclftnn
      121 eevgmigatg fsgdlkadkl lnldseeddr vtigcaggvn lfatislnsk ktkestlyev
      181 kvsglpgghs gneihknipn aikilaafvt kngcklvkfe ggersnsips gvqkiravrs
      241 rsialatftr lkasqkfayk attiwsvwam lqrsr
//
LOCUS       WP_258031825             129 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Campylobacter concisus].
ACCESSION   WP_258031825
VERSION     WP_258031825.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..>129
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          7..>129
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 merqlhgdae ltitgfligf aiaqlvwgpi sdrigrklpl figmalfvvg sigcamsqsm
       61 seviiwrifq atgacvgpml sramisdvfe nseaakmlsn lviimaaapi igpllggall
      121 eigtwhwif
//
LOCUS       WP_258031887             164 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Campylobacter
            concisus].
ACCESSION   WP_258031887
VERSION     WP_258031887.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 164)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..164
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          6..155
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            49..82
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 qensfqesaa aveqmsssmn aisqktadvi rqsdeiknii tiirdiadqt nllalnaaie
       61 aaragehgrg favvadevrk laertqkslg eieantnvla qsinemsesi keqseginmi
      121 nqsvaqidnl tkenvvianr anevtsdvdn maktivsevr knkf
//
LOCUS       WP_258031685             164 aa            linear   BCT 02-MAR-2025
DEFINITION  transglutaminase-like cysteine peptidase [Campylobacter concisus].
ACCESSION   WP_258031685
VERSION     WP_258031685.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 164)
  AUTHORS   Ginalski,K., Kinch,L., Rychlewski,L. and Grishin,N.V.
  TITLE     BTLCP proteins: a novel family of bacterial transglutaminase-like
            cysteine proteinases
  JOURNAL   Trends Biochem Sci 29 (8), 392-395 (2004)
   PUBMED   15288868
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017815.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06035.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..164
                     /product="transglutaminase-like cysteine peptidase"
                     /calculated_mol_wt=19547
     Region          <7..122
                     /region_name="COG3672"
                     /note="Predicted transglutaminase-like protein
                     [Posttranslational modification, protein turnover,
                     chaperones]"
                     /db_xref="CDD:442889"
ORIGIN      
        1 mkkiehesfi rklelinsyl nslmpryddf yntnidvwst rgeflrrggg dceeyaiskr
       61 dslkdlgvdn qkcllvvqek ntkkyhmvla vwenlhkepl ildnlsfrvl plskrydlmp
      121 eyclmdgkyf kikkdginle pvnirmqtye nlikkekeek fwkn
//
LOCUS       WP_258031964             127 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1440 domain-containing protein [Campylobacter concisus].
ACCESSION   WP_258031964
VERSION     WP_258031964.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018925.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07274.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..127
                     /product="DUF1440 domain-containing protein"
                     /calculated_mol_wt=14322
     Region          <2..121
                     /region_name="DUF1440"
                     /note="Protein of unknown function (DUF1440); cl01380"
                     /db_xref="CDD:470177"
ORIGIN      
        1 mflrdyvgia dpnaaiyefa ghvfnyvmlt hiifsvvfav gycvvaekfp kitmwqgvma
       61 gilatiavhg islpllgltp plwtlpwyey vsefvghmvw fwsieiirhd lraritkekd
      121 psdccna
//
LOCUS       WP_258031967              94 aa            linear   BCT 02-MAR-2025
DEFINITION  MATE family efflux transporter, partial [Campylobacter concisus].
ACCESSION   WP_258031967
VERSION     WP_258031967.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01554.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..>94
                     /product="MATE family efflux transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          2..>94
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 mdllkdplkg liislslpag vgmmfntlyn vtgtffaaki stiavagmam sfllylsvvg
       61 iglgfgsalt alignslgan kpkmaklyas ngii
//
LOCUS       WP_258031992             150 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Campylobacter
            concisus].
ACCESSION   WP_258031992
VERSION     WP_258031992.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..>150
                     /product="ABC transporter substrate-binding protein"
     Region          15..>150
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 lvsafdyene navgvaieeq tprinplyde dhdptlslvf sgltshdens hvvpelaksw
       61 qvsedgleyi felrddafwh dgvkfsakdv kftieaaqdk klnapaisny evvksveilg
      121 eykvkitlse pfppfldals fgilpehilk
//
LOCUS       WP_258032034             699 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Campylobacter
            concisus].
ACCESSION   WP_258032034
VERSION     WP_258032034.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 699)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..699
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=77247
     Region          1..698
                     /region_name="PRK13483"
                     /note="ligand-gated channel protein"
                     /db_xref="CDD:184080"
ORIGIN      
        1 mnrskfiaic lsvcvansly avekennetk ldgvvvsasg fsqqikeapa sisvisgdel
       61 tkdsftslhs iaqkvpgvnv vggedgaasg isirgmeksq tlvlidgkrv nsssanpkgg
      121 agdmnsnfip paeaieriev irgpmsslyg sdavggvini itkkdfskfs gnvgisttin
      181 ahkgigdgrq gdfylnlply kdlfalqlwg ykklrdedny kggyqksdkr nlsaklwitp
      241 dehnkffilg ssekhdysrt vgktatiktn kvlnaydyek ksygvgylge fdnlnadisy
      301 iydqtqrtsl fdslipakak nhnfnskftt flgahsltfg ydfskqnvgt tfivsnasrn
      361 glkdpktysm sehagfiede wqildeklfl tlgsrlthne ffgnhlspra ylvynatdtl
      421 slkggvatgy ktpdvnqisp evgtiqrgwt ivdfgnkdlk peksttyevg ayydnqadfr
      481 gsvtlfrnef kdkildtdgs krvngipvfg tclgassvnc pgwgtyfnie gatvwgvels
      541 gdydilsnln lssnytynks kiktgdptin tprgpmkfsq tglnrldgks ltatpehvfh
      601 atltykpvks vktffstnye skltsvqfgp gnrvrentkd lltfdtgvsw dankhltlsl
      661 naynifdkvr ydealaddgn yywypqegrr fwfkvaakw
//
LOCUS       WP_258032038             202 aa            linear   BCT 02-MAR-2025
DEFINITION  LysE/ArgO family amino acid transporter [Campylobacter concisus].
ACCESSION   WP_258032038
VERSION     WP_258032038.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 202)
  AUTHORS   Vrljic,M., Garg,J., Bellmann,A., Wachi,S., Freudl,R., Malecki,M.J.,
            Sahm,H., Kozina,V.J., Eggeling,L., Saier,M.H. Jr., Eggeling,L. and
            Saier,M.H. Jr.
  TITLE     The LysE superfamily: topology of the lysine exporter LysE of
            Corynebacterium glutamicum, a paradyme for a novel superfamily of
            transmembrane solute translocators
  JOURNAL   J Mol Microbiol Biotechnol 1 (2), 327-336 (1999)
   PUBMED   10943564
REFERENCE   2  (residues 1 to 202)
  AUTHORS   Zakataeva,N.P., Aleshin,V.V., Tokmakova,I.L., Troshin,P.V. and
            Livshits,V.A.
  TITLE     The novel transmembrane Escherichia coli proteins involved in the
            amino acid efflux
  JOURNAL   FEBS Lett 452 (3), 228-232 (1999)
   PUBMED   10386596
REFERENCE   3  (residues 1 to 202)
  AUTHORS   Aleshin,V.V., Zakataeva,N.P. and Livshits,V.A.
  TITLE     A new family of amino-acid-efflux proteins
  JOURNAL   Trends Biochem Sci 24 (4), 133-135 (1999)
   PUBMED   10322417
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10003422
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..202
                     /product="LysE/ArgO family amino acid transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015171 - amino acid transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /calculated_mol_wt=22386
     Region          1..202
                     /region_name="ArgO"
                     /note="Arginine exporter protein ArgO [Amino acid
                     transport and metabolism]; COG1279"
                     /db_xref="CDD:440890"
ORIGIN      
        1 mqafisgfft slslilaiga qnafvlrqgi krenifiicl icaisdaali fagvfglgsl
       61 vqnfsiikqi alyggflfll fyalksfhsc ffkdlsmdts sdyarsnlkk nilltlaftw
      121 lnphvyldtm iligsvstkf keenlifgvg aslasfcfff slgylarfla ptfarpiswk
      181 vleffvglim lalafmlifa sf
//
LOCUS       WP_258032164              90 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Campylobacter
            concisus].
ACCESSION   WP_258032164
VERSION     WP_258032164.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 90)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 90)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 90)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 90)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..90
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=9671
     Region          4..>73
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            35..42
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213181"
ORIGIN      
        1 mkfkiknlsc gydkkvvien fnanlqdgdi fcllgsngvg ktttfktilg flkplggeil
       61 idgkdalkms ekesklyklc passhsaicl
//
LOCUS       WP_258031920             144 aa            linear   BCT 02-MAR-2025
DEFINITION  Asd/ArgC dimerization domain-containing protein, partial
            [Campylobacter concisus].
ACCESSION   WP_258031920
VERSION     WP_258031920.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 144)
  AUTHORS   Hadfield,A., Kryger,G., Ouyang,J., Petsko,G.A., Ringe,D. and
            Viola,R.
  TITLE     Structure of aspartate-beta-semialdehyde dehydrogenase from
            Escherichia coli, a key enzyme in the aspartate family of amino
            acid biosynthesis
  JOURNAL   J Mol Biol 289 (4), 991-1002 (1999)
   PUBMED   10369777
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014793.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02774.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..>144
                     /product="Asd/ArgC dimerization domain-containing protein"
                     /GO_function="GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA]"
                     /GO_function="GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /GO_process="GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
     Region          <1..144
                     /region_name="PRK14874"
                     /note="aspartate-semialdehyde dehydrogenase; Provisional"
                     /db_xref="CDD:237845"
ORIGIN      
        1 meelvvqmqk ffefkldece pkvfahrlal nviphidvfl dndytkeemk mvnetqkilh
       61 kdievsatcv rvpvlrshse aitihfdkdv sadaareils kapsvvvvdn pakkeypmpt
      121 issdtnetyv grirvdnfrs nvlh
//
LOCUS       WP_258032173             205 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase [Campylobacter concisus].
ACCESSION   WP_258032173
VERSION     WP_258032173.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 205)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..205
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=23474
     Region          <11..204
                     /region_name="OpgE"
                     /note="Phosphoethanolamine transferase for periplasmic
                     glucans OpgE, AlkP superfamily [Cell
                     wall/membrane/envelope biogenesis]; COG2194"
                     /db_xref="CDD:441797"
ORIGIN      
        1 mavakkievv vcdnldqnht sdhraegfde vifdeakkvi edansttliv lhlqgshgpi
       61 yykgyprkfk eftptcdtae lnkcapeeia ntydntilye yylqsklina learkdefev
      121 tmfffsdhge slgengiylh glpysiapde qkhipaivfs sdrellkrlk trrdeslshd
      181 fifssvlgyf giktkvyepe fdifr
//
LOCUS       WP_258032181             245 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Campylobacter
            concisus].
ACCESSION   WP_258032181
VERSION     WP_258032181.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 245)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..245
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=27061
     Region          <2..245
                     /region_name="Fiu"
                     /note="Outer membrane receptor for monomeric catechols
                     [Inorganic ion transport and metabolism]; COG4774"
                     /db_xref="CDD:443806"
ORIGIN      
        1 menlnlytty adsisdeqts ytfpsihprr gemiviepir skqyeigaka rlgeldlsaa
       61 vfeikrpvay lvgsgasaey kiqgtqrnrg felttggkli dtlsmyggft lldakiknak
      121 dgvsegktvi gepkfqanvl fdyavpstnk lafttnfhyt gkryidnana hsvngyfttd
      181 igaryttkaw lgkettirfd innlfdkkyw agmfpsdvdg aiagrgtslf lgqsrtfmls
      241 aqvkf
//
LOCUS       WP_258032223             164 aa            linear   BCT 02-MAR-2025
DEFINITION  transglutaminase-like cysteine peptidase [Campylobacter concisus].
ACCESSION   WP_258032223
VERSION     WP_258032223.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 164)
  AUTHORS   Ginalski,K., Kinch,L., Rychlewski,L. and Grishin,N.V.
  TITLE     BTLCP proteins: a novel family of bacterial transglutaminase-like
            cysteine proteinases
  JOURNAL   Trends Biochem Sci 29 (8), 392-395 (2004)
   PUBMED   15288868
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017815.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06035.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..164
                     /product="transglutaminase-like cysteine peptidase"
                     /calculated_mol_wt=19475
     Region          <7..122
                     /region_name="COG3672"
                     /note="Predicted transglutaminase-like protein
                     [Posttranslational modification, protein turnover,
                     chaperones]"
                     /db_xref="CDD:442889"
ORIGIN      
        1 mkkiehesfi rklelinshl nslmpryddf yntnvdvwst rgeflrrggg dceeyaiskr
       61 dslkdlgvdn qkcllvvqek ntkkyhmvla vwenlhkepl ildnlsfrvl plskrydlvp
      121 eyclmdgkyf kikkdginle pvnirmqtye nlikkekeek fwkn
//
LOCUS       WP_258032238             128 aa            linear   BCT 02-MAR-2025
DEFINITION  putative phage tail assembly chaperone [Campylobacter concisus].
ACCESSION   WP_258032238
VERSION     WP_258032238.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 128)
  AUTHORS   Pell,L.G., Cumby,N., Clark,T.E., Tuite,A., Battaile,K.P.,
            Edwards,A.M., Chirgadze,N.Y., Davidson,A.R. and Maxwell,K.L.
  TITLE     A conserved spiral structure for highly diverged phage tail
            assembly chaperones
  JOURNAL   J Mol Biol 425 (14), 2436-2449 (2013)
   PUBMED   23542344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022332.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10876.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..128
                     /product="putative phage tail assembly chaperone"
                     /calculated_mol_wt=13869
     Region          7..126
                     /region_name="Phage_TAC_9"
                     /note="Phage tail assembly chaperone protein, TAC;
                     pfam10876"
                     /db_xref="CDD:337861"
ORIGIN      
        1 minenkyvlr sanffetktq lqsllglakd aikmqgedvn idvgqiiani gsaafsgven
       61 filkyasvin aeggeillrn vsqaethfnt nrgdyaqlil eglkyhfldf lpagaksltg
      121 itaylnka
//
LOCUS       WP_258032273              87 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Campylobacter concisus].
ACCESSION   WP_258032273
VERSION     WP_258032273.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 87)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..87
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=9397
     Region          4..>62
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
ORIGIN      
        1 mkilvvedei dlnsvitrhl kkngysvdsv yngeeamgft avahydlivl dlmmpvmggl
       61 kvshrkasdp cadtnskgrc grrckga
//
LOCUS       WP_258032254             116 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor plug domain-containing protein
            [Campylobacter concisus].
ACCESSION   WP_258032254
VERSION     WP_258032254.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 116)
  AUTHORS   Oke,M., Sarra,R., Ghirlando,R., Farnaud,S., Gorringe,A.R.,
            Evans,R.W. and Buchanan,S.K.
  TITLE     The plug domain of a neisserial TonB-dependent transporter retains
            structural integrity in the absence of its transmembrane
            beta-barrel
  JOURNAL   FEBS Lett 564 (3), 294-300 (2004)
   PUBMED   15111112
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07715.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..116
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /calculated_mol_wt=11938
     Region          2..>112
                     /region_name="PRK13483"
                     /note="ligand-gated channel protein"
                     /db_xref="CDD:184080"
ORIGIN      
        1 miggdeftkd sftslhsiaq kvpgvnvvgg edgaasgisi rgmeksqtlv lidgkrvnss
       61 sanpkggagn mnsnfippae aierievirg pmsslygsda vggviniitk kdffki
//
LOCUS       WP_258032291             270 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Campylobacter
            concisus].
ACCESSION   WP_258032291
VERSION     WP_258032291.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 270)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..>270
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          2..>270
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
ORIGIN      
        1 pllkiqlila vlfivilsaf vyfllkksln piktiqskld dlfkfvtyea kapsklevrs
       61 ndefgemska inenidkvva gikkdstmid elnkvanlmi kgnlgakiss tpnnpslnel
      121 kellnkffts isanlkgitn vlssytkndf takveineel eadlkamilg vsnmgevvcs
      181 mlnsnlsqaq lleekattla eamkeltqga stqanslqes aaaveqmsss mnaisqkaed
      241 vtrqseeikn iiviirdiad qtnllalnaa
//
LOCUS       WP_258032440             725 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Campylobacter concisus].
ACCESSION   WP_258032440
VERSION     WP_258032440.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 725)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..725
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=83018
     Region          <275..720
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mdkvktkith wlaicfgvfl wsicdalmvl nqdvllrahs syayldvffm lpmisilagv
       61 siflyskfva sqeklaivmd sisvfflivi liygifdeid issminngsn ivflsivain
      121 flilfitlse iftssllhik isgfylisas ilftmlnlfi fysqisnvnf ghkidflyiv
      181 pffflmigaf hlkakneyvt ntdkdisigs kwlpiiivlp lllqedltsf salislfilv
      241 vnaivnyyvk ssiasrkild yernihreme ksmhertnel mlanlrlqdm sekdyltdlg
      301 nrnfivnele imcksisede eivvyyinls rfksintsyg heigdrilkl vakrilevcn
      361 rqeaiarisa defivlakme inshtkrlnl gialkdtiek piqidryhfg lkciigidva
      421 tknstanprn iiknadmamy yakknpalnp mvysdkisne mhlsssieia lkkanlqedl
      481 hvyfqpifdl kiekmicaev flywksekfg lmeaskfmke vnvnsdilnd icsllvskti
      541 eyvdrwqkek llipkisinv aqiqsksekf vldfisslrs hyinpelfei efgeeiwtnn
      601 tktldkifsi lkennidvci dnfgsgytsf iyirkygvkr ikiasefvaq asnskidaqi
      661 vsaiidlaka mkikvgakgv ekeedihflk eldcnevqgl flsrpmsaee fedlvrqdpq
      721 miakv
//
LOCUS       WP_258032300            1349 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Campylobacter
            concisus].
ACCESSION   WP_258032300
VERSION     WP_258032300.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 1349)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 1349)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 1349)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 1349)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 1349)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 1349)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 1349)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 1349)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 1349)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1349
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..1349
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=154957
     Region          329..580
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          338..455
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cl21578"
                     /db_xref="CDD:473914"
     Site            order(365,369,375,388..389,390,414,419)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(385,389,396,399..400,426)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          <819..1232
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mqknsakpvl qifkrfyvki vlllfafifl alfvifagin dikyeistln litrnnivst
       61 fadvkdnist karlikngie pfnddsntsk fyaafyviak dnsllyqrkf egafelhnyd
      121 iswfsdikeg efrlsnrfyk nrrfkdiyia yglkngnkil aqlnpnllkn kvdtgynknf
      181 aayvflvdkd gnlsrdefyr kfikedfnky isqggefkad kiifilkdmn fykisyleeq
      241 klfvitgssr qaqifiqlvl vvlsffcfva fsilwlrdns yikdkilsaf trialfavdk
      301 skptdedfdi kefislnnsi kklyedrdka yetaqsyesr fgyvfeksfl kivvfdaytg
      361 vitdisnall enlgykkddv adlnikelie desknlaedr enainnnlyy eaklrrknge
      421 iidvlatqss felentrlnf ilikditqek itqrnddiik syvflspnvi aiasaqepfl
      481 iiqstnniek ifnvqsqgli nlediiased fdsfkaamla nkkaflqtsk neelnfianm
      541 tntygkkipf rirakfidad eqkviysftd lsdmlklqer fekqskeska llwaseanvf
      601 twdkrsdmln isdelskvlg tqstlnfeqa klvfvdefds fysffeslrd aqtyikdikl
      661 ysidkeilhf rlrakaleyd efgevslikg tlrdlsleds fficqdllak ifsfskeevv
      721 lldeemrvid andaffesag akdsvylkdi tfikqglsdi khqiietinq ggswsgkvws
      781 ennknkskle vieilplida sekrtgyiml amlanneaqn ekylefiayh dpltklpnrf
      841 llynklnsli qkneqkiavi yldmddfksi ndnfghqigd kflvaiseki gamfngknif
      901 ariggdefvg vinyenlgev yeiaqnmlrl asdevkidel klkasasvgi alanselgad
      961 dvlqradwam yqakisgknr sytfdakkdv yfksqyedgs kilkaldage mflefqpeis
     1021 fstgetlsfe alirwrkdge iiypsdflpl iktssassni alftikeall arkmwlengi
     1081 sakvrvnlsv kklftqefwh kfkaifdedk sldptgliid vidaatatnl eileiyvrky
     1141 kelgihfsld dfasysssie algmlktnrf nidnkfckhi fnskealesi nmirfvadkf
     1201 glnatiknid dkrtlefllg lgfdkfqgni fslallakda alfkferpyl hikdyknsen
     1261 felfkglvvl kelanevian lnqddklaqs lkqkiedeik nigkfnqeis inlsklasss
     1321 dsgelynlav siikecdinl gfnkeirve
//
LOCUS       WP_258032483             594 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Campylobacter
            concisus].
ACCESSION   WP_258032483
VERSION     WP_258032483.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 594)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..594
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=66084
     Region          4..586
                     /region_name="PRK13513"
                     /note="ligand-gated channel protein"
                     /db_xref="CDD:184104"
ORIGIN      
        1 mrsllkisic aavfinlplf anedkllpev kvvsatgfeq nikdapatls vitqdalekr
       61 nhkdvesmvk dvpslfgatp eaanrrgisi rgfstrftki lvngmpvpgd naykglrsvg
      121 gsysfippas aisrievirg pmsslygsda lggviniitd efsnefsanl gssykfarnk
      181 nisgefynsl ylhsgliddl lsisvygknl nksedkisya nreqkdinfg tklffrpnen
      241 nditlelars dvkykrtkgk tlstgtnsva serikgdvin lshearldni llqsylsygk
      301 ikeiaqqnlt lktlnfdtkg syftdnnaft lglnakkekl dekattadaa nvkrydisly
      361 geddyhltkd filstgiryn ydenygshvs prvygiysfn dffalkggvs tgyatpdikq
      421 rtqdlalpfa ggrgaqlgrs slkpetsvsy efggvynnne gfeasltgfy tsfkdmlsys
      481 picsrgsvcr hkgkiypngi wesvnigkae iygveltnew qvtnalrlnq syvytrskqk
      541 dgaeigksln nyplhtfkfg anyelnrwln fwsqinyygr tknsfsyadd tdlt
//
LOCUS       WP_258032491             202 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase [Campylobacter concisus].
ACCESSION   WP_258032491
VERSION     WP_258032491.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 202)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..202
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=22462
     Region          <2..>166
                     /region_name="OpgE"
                     /note="Phosphoethanolamine transferase for periplasmic
                     glucans OpgE, AlkP superfamily [Cell
                     wall/membrane/envelope biogenesis]; COG2194"
                     /db_xref="CDD:441797"
ORIGIN      
        1 mlpyypiysa iklvksliqk plpftyvadd aaladdkkki lvlivgetqr sknyslngya
       61 knntnkftkq ndvvsftnfy scgtatetsv pclfsdlkre dfsnreakar enlvdiinkl
      121 giktyffgnn sggckgvcdn ldqnhtsdhr aesfdevifn eakkvipppl scyifkarma
      181 lsttkvtqan lknlpqlail ps
//
LOCUS       WP_258032555            1350 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Campylobacter
            concisus].
ACCESSION   WP_258032555
VERSION     WP_258032555.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 1350)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 1350)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 1350)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 1350)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 1350)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 1350)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 1350)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 1350)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 1350)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1350
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..1350
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=154869
     Region          329..581
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          338..455
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cl21578"
                     /db_xref="CDD:473914"
     Site            order(365,369,375,388..389,390,414,419)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(385,389,396,399..400,426)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          <820..1233
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mqknsakpvl qifkrfyvki alllfafifl alfvifagin dikyeistln litrnnivst
       61 fvevkdnitt karliangve pfyedtvvsk fyaafyviak dnsllyerkf egafelhnyd
      121 iswfsdikag efrlsdrfyk nrrfkdiyia yglkngnkil vqlnqnllkn kvdtgynknl
      181 aayvflvdkd gnlsrdefyr kfikedfnky isqggefkad kiifklkdmn fykisyleeq
      241 klfvitgssr qaqifiqlvl vvlsffcfva fsilwlrdns yikdkilspf tritlfaadk
      301 skptdeefdi keftslnnsi kklyedrdka yetaqsyesr fgyvfeksfl kivvydaytg
      361 vitdisnall enlgykkddv adlnikelle desknlaedr enainndlsy eaklrrknge
      421 iidvlatqss felentrlnf ilikditqek mtqrnddiik syvflspnvi aiasaqepfl
      481 iiqstnnver ifnvqsqgli nlediiased fdsfkaavla skkaflqasf kneelnfian
      541 mtnaygkkip fkikakfida deqkviysft dlsdmlklqe rfekqskesk allwaseanv
      601 ftwnkrsdml nisdelskil gtqstlnfeq aksvfvdefd sfysffeslr daqtyikdik
      661 lysidkeilh frlrakaley defgevslik gtlrdlsled sffvcqdlla kifsfskeev
      721 vlldeemrii dandaffess gakdsvylkd itfikqglsd ikhqiietin qggswsgkvw
      781 sennknkskl evieilplid asekktgyim lamlanneaq nekylefiay hdpltklpnr
      841 fllynklnsl iqkneqkiav iyldmddfks indnfghqig dkflvaisek igamfngkni
      901 fariggdefv gvinyenlge vyeiaqnmlr lasdevkide lklkasasvg ialadselga
      961 ddvlqradwa myqakisgkn rsytfdakkd vyfksqyedg skilkaldag emflefqpei
     1021 sfstgetlsf ealirwrkdg eiiypsdflp liktssassn ialftikeal varkmwleng
     1081 isakvrvnls vkklfteefw hkfkaifded ksldptglii dvidaatatn leileiyvrk
     1141 ykelgihfsl ddfasysssi ealgmlktnr fnidnkfckh ifnskeales inmirfvadk
     1201 fglnatikni ddkrtlefll glgfdkfqgn ifslallakd aalfkferpy lhikdyknse
     1261 nfelfkglvv lkelanevia nlnqddklaq slkqkiedei knigkfnqei sinlsklass
     1321 sdsgelynla vsiikecdin lgfskeirve
//
LOCUS       WP_258032566             443 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2809 domain-containing protein [Campylobacter concisus].
ACCESSION   WP_258032566
VERSION     WP_258032566.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022443.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10990.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..443
                     /product="DUF2809 domain-containing protein"
                     /calculated_mol_wt=52305
     Region          48..129
                     /region_name="DUF2809"
                     /note="Protein of unknown function (DUF2809); pfam10990"
                     /db_xref="CDD:431585"
     Region          <161..>240
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          188..233
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
ORIGIN      
        1 mredtkkail sptdasrsey cwdarmnwam mgiailafei fiaiyakdgf iryylgdvla
       61 aamlyafgra afrlppkila lavftlslvi eiaqyfkvle ilgvqnyalw iifggtfdwt
      121 diicyaigcv layasenfig sehaiyneir ifrrkrlpkn fneilqsgdd ekikavfeiy
      181 dinatdkdgn tilhmlhank dikkkdpnsp yayadanlie wiimqggnin aknkkgktpl
      241 rnfmryvykn lkphqklviv gkqdytsrey ikqagevvni dfgimynyiy nllpeksqiy
      301 iwrrfgkrle ylyvpeyptd mekydpqeys eftynfwmkf lrqkdsvqyk mihaatnlyw
      361 ywdyngeygr wilwdgeytd kaaaeikkyf klgnrleeln ddaldkmfyn lrkswhaedv
      421 gklrylfvlw llknpepffe dei
//
LOCUS       WP_258032581             140 aa            linear   BCT 02-MAR-2025
DEFINITION  CiaD-like domain-containing protein [Campylobacter concisus].
ACCESSION   WP_258032581
VERSION     WP_258032581.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 140)
  AUTHORS   Gabbert,A.D., Mydosh,J.L., Talukdar,P.K., Gloss,L.M.,
            McDermott,J.E., Cooper,K.K., Clair,G.C. and Konkel,M.E.
  TITLE     The Missing Pieces: The Role of Secretion Systems in Campylobacter
            jejuni Virulence
  JOURNAL   Biomolecules 13 (1), 135 (2023)
   PUBMED   36671522
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047040.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21862.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..140
                     /product="CiaD-like domain-containing protein"
                     /calculated_mol_wt=15870
ORIGIN      
        1 mvdkimkldd iarmaisevs aelekiealq nkkqeelere nlkkellame aseqevadep
       61 eleasaqsep epkvaqispk sreiseeeif lanlaeriev lfeglkqtse qdlgqrlelt
      121 tkfleftlan ienrlqnlsk
//
LOCUS       WP_258032601            1349 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Campylobacter
            concisus].
ACCESSION   WP_258032601
VERSION     WP_258032601.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 1349)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 1349)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 1349)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 1349)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 1349)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 1349)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 1349)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 1349)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 1349)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1349
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..1349
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=154998
     Region          329..580
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          338..455
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cl21578"
                     /db_xref="CDD:473914"
     Site            order(365,369,375,388..389,390,414,419)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(385,389,396,399..400,426)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          <819..1243
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mqknsakpvl qifkrfyvki alllfafifl alfvifagin dikyeistln fitrnnivst
       61 fvdvkdnist karlikngie pfnddsntsk fyaafyviak dnsllyqrkf egafelhnyd
      121 iswfsdikeg efrlsnrfyk nrrfkdiyia yglkngnkil aqlnpnllkk kvdtgynknl
      181 aayvflvdkd gnlsrdefyr kfikedfnky isqggefkad kiifilkdmn fykisyleeq
      241 klfvitgssr qaqifiqlvl vvlsflcfva fsilwlrdns yikdkilspf irialfavdk
      301 skptdekfdi kefislnnsi kklyedrdka yetaqsyesr fgyvfeksfl kivvfdaytg
      361 vitdisnall enlgykkddv adlnikelie desknlaedr enainnnlyy eaklrrknge
      421 iidvlatqss felentrlnf ilikditqek itqrnddiik syvflspnvi aiasaqepfl
      481 iiqstnniek ifnvqsqgli nlediiased fdsfkaamla nkkaflqtsk neelnfianm
      541 tntygkkipf rirakfidad eqkviysftd lsdmlklqer fekqskeska llwaseanvf
      601 twdkrsdmln isdelskilg tqstlnfeqa ksvfvdefds fysffeslrd aqtyikdikl
      661 ysidkeilhf rlrakaleyd efgevslikg tlrdlsleds ffvcqdllak ifsfskeevv
      721 lldeemrvid andaffesag akdsvylkdi tfikqglsdi khqiietinq ggswsgkvws
      781 ennknkskfe vieilplida nekktgyiml amlanneaqn ekylefiayh dpltklpnrf
      841 llynklnsli qkneqkiavi yldmddfksi ndnfghqigd kflvaiseki gamfngknif
      901 ariggdefvg vinyenlgev yeiaqnmlrl asdevkidel klkastsigi aladselgad
      961 dvlqradwam yqakisgknr sytfdakkdv yfksqyedgs kilkaldage mflefqpeis
     1021 fstgetlsfe alirwrkdge tiypsdflpl iktssassni alftikeall arkmwlengi
     1081 sakvrvnlsv kklfteefwh kfkaifdedk sldpagliid vidaatatnl evleiyvrky
     1141 kefgihfsld dfasysssie algmlktnrf nidnkfcqhi fnskealesi nmirfvadkf
     1201 glnatiknid dkrtlefllg lgfdkfqgni fslallakda asfkferpyl hikdyknsen
     1261 felfkglvvl kelanevian lnqddklaqs lkqkiedeik nigkfnqeis inlsklasss
     1321 dsgelynlam siikecdinl gfskeirve
//
LOCUS       WP_258032383             143 aa            linear   BCT 02-MAR-2025
DEFINITION  CiaD-like domain-containing protein [Campylobacter concisus].
ACCESSION   WP_258032383
VERSION     WP_258032383.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 143)
  AUTHORS   Gabbert,A.D., Mydosh,J.L., Talukdar,P.K., Gloss,L.M.,
            McDermott,J.E., Cooper,K.K., Clair,G.C. and Konkel,M.E.
  TITLE     The Missing Pieces: The Role of Secretion Systems in Campylobacter
            jejuni Virulence
  JOURNAL   Biomolecules 13 (1), 135 (2023)
   PUBMED   36671522
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047040.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21862.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..143
                     /product="CiaD-like domain-containing protein"
                     /calculated_mol_wt=16331
ORIGIN      
        1 mvdkimkldd iarmaisevs aelekiealq nkkqeelere nlkkellaie snenalnnel
       61 kveanlqneq vfevkdepas itksrevsee kiflanlaer ievlfeglkq tseqnlasrl
      121 elttkfleft lanienrlqn lsk
//
LOCUS       WP_258032733              50 aa            linear   BCT 02-MAR-2025
DEFINITION  pyruvate kinase, partial [Campylobacter concisus].
ACCESSION   WP_258032733
VERSION     WP_258032733.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 50)
  AUTHORS   Yuan,M., McNae,I.W., Chen,Y., Blackburn,E.A., Wear,M.A.,
            Michels,P.A.M., Fothergill-Gilmore,L.A., Hupp,T. and
            Walkinshaw,M.D.
  TITLE     An allostatic mechanism for M2 pyruvate kinase as an amino-acid
            sensor
  JOURNAL   Biochem J 475 (10), 1821-1837 (2018)
   PUBMED   29748232
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 50)
  AUTHORS   Munoz,M.E. and Ponce,E.
  TITLE     Pyruvate kinase: current status of regulatory and functional
            properties
  JOURNAL   Comp Biochem Physiol B Biochem Mol Biol 135 (2), 197-218 (2003)
   PUBMED   12798932
REFERENCE   3  (residues 1 to 50)
  AUTHORS   Valentini,G., Chiarelli,L.R., Fortin,R., Dolzan,M., Galizzi,A.,
            Abraham,D.J., Wang,C., Bianchi,P., Zanella,A. and Mattevi,A.
  TITLE     Structure and function of human erythrocyte pyruvate kinase.
            Molecular basis of nonspherocytic hemolytic anemia
  JOURNAL   J Biol Chem 277 (26), 23807-23814 (2002)
   PUBMED   11960989
REFERENCE   4  (residues 1 to 50)
  AUTHORS   Larsen,T.M., Benning,M.M., Wesenberg,G.E., Rayment,I. and Reed,G.H.
  TITLE     Ligand-induced domain movement in pyruvate kinase: structure of the
            enzyme from rabbit muscle with Mg2+, K+, and L-phospholactate at
            2.7 A resolution
  JOURNAL   Arch Biochem Biophys 345 (2), 199-206 (1997)
   PUBMED   9308890
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012449.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00224.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..50
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..>50
                     /product="pyruvate kinase"
                     /GO_function="GO:0000287 - magnesium ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0004743 - pyruvate kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0030955 - potassium ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006096 - glycolytic process [Evidence
                     IEA]"
     Region          1..>43
                     /region_name="PykF"
                     /note="Pyruvate kinase [Carbohydrate transport and
                     metabolism]; COG0469"
                     /db_xref="CDD:440237"
ORIGIN      
        1 mikktkivat lgpasdneet meamvkagvn vfrlnfshgt heypnsniek
//
LOCUS       WP_258032513             140 aa            linear   BCT 02-MAR-2025
DEFINITION  CiaD-like domain-containing protein [Campylobacter concisus].
ACCESSION   WP_258032513
VERSION     WP_258032513.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 140)
  AUTHORS   Gabbert,A.D., Mydosh,J.L., Talukdar,P.K., Gloss,L.M.,
            McDermott,J.E., Cooper,K.K., Clair,G.C. and Konkel,M.E.
  TITLE     The Missing Pieces: The Role of Secretion Systems in Campylobacter
            jejuni Virulence
  JOURNAL   Biomolecules 13 (1), 135 (2023)
   PUBMED   36671522
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047040.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21862.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..140
                     /product="CiaD-like domain-containing protein"
                     /calculated_mol_wt=15992
ORIGIN      
        1 mvdkimkldd iarmaisevs aelekiealq nkkqeelere nlkkellame aseqeaadep
       61 efeastqiep epkvtqispk sreiseeeif lanlaeriev lfeglkqtse qdlsqrlelt
      121 tkfleftlan ienrlqnlsk
//
LOCUS       WP_258032861             343 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Campylobacter concisus].
ACCESSION   WP_258032861
VERSION     WP_258032861.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 343)
  AUTHORS   Das,A.K., Cohen,P.W. and Barford,D.
  TITLE     The structure of the tetratricopeptide repeats of protein
            phosphatase 5: implications for TPR-mediated protein-protein
            interactions
  JOURNAL   EMBO J 17 (5), 1192-1199 (1998)
   PUBMED   9482716
REFERENCE   2  (residues 1 to 343)
  AUTHORS   Lamb,J.R., Tugendreich,S. and Hieter,P.
  TITLE     Tetratrico peptide repeat interactions: to TPR or not to TPR?
  JOURNAL   Trends Biochem Sci 20 (7), 257-259 (1995)
   PUBMED   7667876
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019339.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07719.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..343
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=39421
     Region          64..>175
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          74..105
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(75,78..79,82..83,85,112,115..116,119..120,122..123,
                     146,149..150,153..154,157)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          110..140
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          145..169
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          301..327
                     /region_name="Rubredoxin_2"
                     /note="Rubredoxin metal binding domain; pfam18073"
                     /db_xref="CDD:436248"
ORIGIN      
        1 msvdiffigh rdpifsliil fsiilmiaal syawgifssk dekkriekfi rkfdskdgis
       61 sehkqmlqsp eidaqslcml gqtfakngdf eksisvylia lgkvrdknek efilnelgev
      121 yfkagflkka sevfekvlel sprnvlalrf ltmideklkn ykealyalns leelgvnvkd
      181 qkayikaist lddrnlsfne kveilshlsq nfellkrmil alfirhnenl enlkdfarfe
      241 dvidllynlk tpinlndpky kslfyakgdi depceiygfe lnvikklkda kfdaaglsfn
      301 yvckscknsf pmhfyrcpvc helgsvkils hiteksseds ntf
//
LOCUS       WP_258032903             122 aa            linear   BCT 02-MAR-2025
DEFINITION  twin-arginine translocation signal domain-containing protein
            [Campylobacter concisus].
ACCESSION   WP_258032903
VERSION     WP_258032903.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 122)
  AUTHORS   Berks,B.C.
  TITLE     A common export pathway for proteins binding complex redox
            cofactors?
  JOURNAL   Mol Microbiol 22 (3), 393-404 (1996)
   PUBMED   8939424
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021997.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10518.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..122
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /calculated_mol_wt=13209
     Region          43..>122
                     /region_name="Molybdopterin-Binding"
                     /note="Molybdopterin-Binding (MopB) domain of the MopB
                     superfamily of proteins, a large, diverse, heterogeneous
                     superfamily of enzymes that, in general, bind
                     molybdopterin as a cofactor. The MopB domain is found in a
                     wide variety of molybdenum- and...; cl09928"
                     /db_xref="CDD:447860"
ORIGIN      
        1 mqgekmqrrd flkaaaataa gasslnatsl isdnlmsdtp akmsashfga ikglvkngkf
       61 egaldaseid fypvsltqgv vartydqtri arpsvrkgyl ekgyqsdksm rgkdewveis
      121 we
//
LOCUS       WP_258032910             147 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein,
            partial [Campylobacter concisus].
ACCESSION   WP_258032910
VERSION     WP_258032910.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 147)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..>147
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
     Region          <2..>147
                     /region_name="MrcA"
                     /note="Membrane carboxypeptidase/penicillin-binding
                     protein [Cell wall/membrane/envelope biogenesis]; COG5009"
                     /db_xref="CDD:444033"
ORIGIN      
        1 idyakssynr atqskrqpgs sikpfiyqia ldsgysvvsq vadiaktfdm gngkewtpkn
       61 ysggfqgyit iksavtqsrn latinllndl glssvrkqlt dmgfndipen lsialgsfgi
      121 spldfakfys mfpndgevve ptlikhi
//
LOCUS       WP_258032916             156 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin dinucleotide binding domain-containing protein
            [Campylobacter concisus].
ACCESSION   WP_258032916
VERSION     WP_258032916.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Hochheimer,A., Hedderich,R. and Thauer,R.K.
  TITLE     The formylmethanofuran dehydrogenase isoenzymes in Methanobacterium
            wolfei and Methanobacterium thermoautotrophicum: induction of the
            molybdenum isoenzyme by molybdate and constitutive synthesis of the
            tungsten isoenzyme
  JOURNAL   Arch Microbiol 170 (5), 389-393 (1998)
   PUBMED   9818358
REFERENCE   2  (residues 1 to 156)
  AUTHORS   Schneider,F., Lowe,J., Huber,R., Schindelin,H., Kisker,C. and
            Knablein,J.
  TITLE     Crystal structure of dimethyl sulfoxide reductase from Rhodobacter
            capsulatus at 1.88 A resolution
  JOURNAL   J Mol Biol 263 (1), 53-69 (1996)
   PUBMED   8890912
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013717.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01568.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..156
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /calculated_mol_wt=17593
     Region          13..136
                     /region_name="MopB_CT_DMSOR-BSOR-TMAOR"
                     /note="The MopB_DMSOR-BSOR-TMAOR CD contains
                     dimethylsulfoxide reductase (DMSOR), biotin sulfoxide
                     reductase (BSOR), trimethylamine N-oxide reductase (TMAOR)
                     and other related proteins. DMSOR always catalyzes the
                     reduction of DMSO to dimethylsulfide, but its...; cd02793"
                     /db_xref="CDD:239194"
     Site            order(19,21..22,25,27..29,93,111,128)
                     /site_type="other"
                     /note="molybdopterin cofactor binding site"
                     /db_xref="CDD:239194"
ORIGIN      
        1 mewlgdvekt kkyplnlvtp hpkyrlhsql nntwlrnlee vqgrepvwmh pddakargle
       61 ngdvvrifnd rgqtlagliv tknvkqgvvr mqegswwdpd knglcrhgnv nvlipnepts
      121 slamgnqata lvqiekfege lpnlevfsrp kfakkg
//
LOCUS       WP_258032608              61 aa            linear   BCT 02-MAR-2025
DEFINITION  twin-arginine translocation signal domain-containing protein
            [Campylobacter concisus].
ACCESSION   WP_258032608
VERSION     WP_258032608.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 61)
  AUTHORS   Berks,B.C.
  TITLE     A common export pathway for proteins binding complex redox
            cofactors?
  JOURNAL   Mol Microbiol 22 (3), 393-404 (1996)
   PUBMED   8939424
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021997.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10518.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..61
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..61
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /calculated_mol_wt=6366
ORIGIN      
        1 melkqtgisr rgflkgalat aaaatpqtml agftpfksds lqvwscggls eafnelnaiy
       61 e
//
LOCUS       WP_258032940             282 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5675 family protein [Campylobacter concisus].
ACCESSION   WP_258032940
VERSION     WP_258032940.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040141.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18925.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..282
                     /product="DUF5675 family protein"
                     /calculated_mol_wt=31738
     Region          4..>71
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
     Region          148..269
                     /region_name="DUF5675"
                     /note="Family of unknown function (DUF5675); pfam18925"
                     /db_xref="CDD:465915"
ORIGIN      
        1 mtliekiken eglkdhryed slgrltvgyg fllaaltade lalnggkyep msketadkil
       61 elklqkltaa vfatfdwlke kttkrprssd rnglsarrfk geeirnhdas ykngrirsrl
      121 skrhelslgk tnskqskkgt rrlivkltit rfknisdgti gkfelceade kpllsgytle
      181 pagedcvtpg rdlrvpqgvy etaweysprf grvlatlfne evsknrrili hagkypkdtl
      241 gcvligakvd ergiydskkt leafmerakn kpltveiink gv
//
LOCUS       WP_258033054              56 aa            linear   BCT 02-MAR-2025
DEFINITION  Rid family hydrolase, partial [Campylobacter concisus].
ACCESSION   WP_258033054
VERSION     WP_258033054.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 56)
  AUTHORS   Lambrecht,J.A., Flynn,J.M. and Downs,D.M.
  TITLE     Conserved YjgF protein family deaminates reactive enamine/imine
            intermediates of pyridoxal 5'-phosphate (PLP)-dependent enzyme
            reactions
  JOURNAL   J Biol Chem 287 (5), 3454-3461 (2012)
   PUBMED   22094463
REFERENCE   2  (residues 1 to 56)
  AUTHORS   Thakur,K.G., Praveena,T. and Gopal,B.
  TITLE     Mycobacterium tuberculosis Rv2704 is a member of the
            YjgF/YER057c/UK114 family
  JOURNAL   Proteins 78 (3), 773-778 (2010)
   PUBMED   19899170
REFERENCE   3  (residues 1 to 56)
  AUTHORS   Schmitz,G. and Downs,D.M.
  TITLE     Reduced transaminase B (IlvE) activity caused by the lack of yjgF
            is dependent on the status of threonine deaminase (IlvA) in
            Salmonella enterica serovar Typhimurium
  JOURNAL   J Bacteriol 186 (3), 803-810 (2004)
   PUBMED   14729707
REFERENCE   4  (residues 1 to 56)
  AUTHORS   Morishita,R., Kawagoshi,A., Sawasaki,T., Madin,K., Ogasawara,T.,
            Oka,T. and Endo,Y.
  TITLE     Ribonuclease activity of rat liver perchloric acid-soluble protein,
            a potent inhibitor of protein synthesis
  JOURNAL   J Biol Chem 274 (29), 20688-20692 (1999)
   PUBMED   10400702
REFERENCE   5  (residues 1 to 56)
  AUTHORS   Rappu,P., Shin,B.S., Zalkin,H. and Mantsala,P.
  TITLE     A role for a highly conserved protein of unknown function in
            regulation of Bacillus subtilis purA by the purine repressor
  JOURNAL   J Bacteriol 181 (12), 3810-3815 (1999)
   PUBMED   10368157
REFERENCE   6  (residues 1 to 56)
  AUTHORS   Oka,T., Tsuji,H., Noda,C., Sakai,K., Hong,Y.M., Suzuki,I., Munoz,S.
            and Natori,Y.
  TITLE     Isolation and characterization of a novel perchloric acid-soluble
            protein inhibiting cell-free protein synthesis
  JOURNAL   J Biol Chem 270 (50), 30060-30067 (1995)
   PUBMED   8530410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013228.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01042.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..56
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..>56
                     /product="Rid family hydrolase"
     Region          2..>56
                     /region_name="YjgF_YER057c_UK114_family"
                     /note="YjgF, YER057c, and UK114 belong to a large family
                     of proteins present in bacteria, archaea, and eukaryotes
                     with no definitive function. The conserved domain is
                     similar in structure to chorismate mutase but there is no
                     sequence similarity and no...; cl10015"
                     /db_xref="CDD:447879"
ORIGIN      
        1 mkkqistkna pqaigpysqa isangflfis gqlgvtpage fagssveaqa qqsltn
//
LOCUS       WP_258033075             307 aa            linear   BCT 02-MAR-2025
DEFINITION  AIR synthase related protein, partial [Campylobacter concisus].
ACCESSION   WP_258033075
VERSION     WP_258033075.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Li,C., Kappock,T.J., Stubbe,J., Weaver,T.M. and Ealick,S.E.
  TITLE     X-ray crystal structure of aminoimidazole ribonucleotide synthetase
            (PurM), from the Escherichia coli purine biosynthetic pathway at
            2.5 A resolution
  JOURNAL   Structure 7 (9), 1155-1166 (1999)
   PUBMED   10508786
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00586.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..>307
                     /product="AIR synthase related protein"
     Region          <1..307
                     /region_name="PRK01213"
                     /note="phosphoribosylformylglycinamidine synthase subunit
                     PurL"
                     /db_xref="CDD:234921"
ORIGIN      
        1 sgsgmkmyld rvpmrevgmt pyelmlsesq ermlicakkg yeqkvleifr kwdldaeiig
       61 evtssgvmql ywhgelagei pigplseaap vldrpvarpk yldeianlki pknvdnktaf
      121 fkllkepevl nksfiydqyd aniqtntikq pghlgaasis vkgtkkavsm aaqcdpranf
      181 vdpkigaara vaaagrkvam sgavplaitd clnygnpqnp evmwqfkegc egikeacrel
      241 ntpvvsgnvs lyndtdgvsv yptpaivtvg vnedanlnlk stflsegrai yllgetsgef
      301 aaslyak
//
LOCUS       WP_258033076             141 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase family protein, partial [Campylobacter
            concisus].
ACCESSION   WP_258033076
VERSION     WP_258033076.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04851.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..>141
                     /product="DEAD/DEAH box helicase family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
     Region          8..>141
                     /region_name="SWI2_SNF2"
                     /note="SWI2/SNF2 ATPase; pfam18766"
                     /db_xref="CDD:465860"
ORIGIN      
        1 mkkvcryqqf faieetlkrv sakkegarag gliwhtqgsg ksltmvmltk llkqiyinsk
       61 iivvtdridl dgqihetfen tdvkagrass gsdlieklqs gvsvittlvh kfekvknqkv
      121 viragdifvl vdeshrtqgg d
//
LOCUS       WP_258033085              89 aa            linear   BCT 02-MAR-2025
DEFINITION  HisA/HisF-related TIM barrel protein, partial [Campylobacter
            concisus].
ACCESSION   WP_258033085
VERSION     WP_258033085.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 89)
  AUTHORS   Copley,R.R. and Bork,P.
  TITLE     Homology among (betaalpha)(8) barrels: implications for the
            evolution of metabolic pathways
  JOURNAL   J Mol Biol 303 (4), 627-641 (2000)
   PUBMED   11054297
REFERENCE   2  (residues 1 to 89)
  AUTHORS   Fani,R., Tamburini,E., Mori,E., Lazcano,A., Lio,P., Barberio,C.,
            Casalone,E., Cavalieri,D., Perito,B. and Polsinelli,M.
  TITLE     Paralogous histidine biosynthetic genes: evolutionary analysis of
            the Saccharomyces cerevisiae HIS6 and HIS7 genes
  JOURNAL   Gene 197 (1-2), 9-17 (1997)
   PUBMED   9332345
REFERENCE   3  (residues 1 to 89)
  AUTHORS   Fani,R., Lio,P., Chiarelli,I. and Bazzicalupo,M.
  TITLE     The evolution of the histidine biosynthetic genes in prokaryotes: a
            common ancestor for the hisA and hisF genes
  JOURNAL   J Mol Evol 38 (5), 489-495 (1994)
   PUBMED   8028028
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013168.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00977.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..>89
                     /product="HisA/HisF-related TIM barrel protein"
                     /GO_process="GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
     Region          5..>89
                     /region_name="HisF"
                     /note="Imidazole glycerol phosphate synthase subunit HisF
                     [Amino acid transport and metabolism]; COG0107"
                     /db_xref="CDD:439877"
ORIGIN      
        1 mnhfakriip cldvkdgrvv kgvnfvglvd agdpveiakr yndegadelc flditashlg
       61 rdtivdvvkk vasklfiplt vgggirtid
//
LOCUS       WP_258033101             160 aa            linear   BCT 02-MAR-2025
DEFINITION  alanine--tRNA ligase-related protein, partial [Campylobacter
            concisus].
ACCESSION   WP_258033101
VERSION     WP_258033101.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013570.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01411.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..>160
                     /product="alanine--tRNA ligase-related protein"
                     /GO_function="GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /GO_function="GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
     Region          <1..>155
                     /region_name="AlaS"
                     /note="Alanyl-tRNA synthetase [Translation, ribosomal
                     structure and biogenesis]; COG0013"
                     /db_xref="CDD:439784"
ORIGIN      
        1 lelfeselkn tkeifsgeaa fklydtfgfp ldltadmlre kglkvdearf delmseqkar
       61 akaawkgsgd ksakgdfkel lekfgenkfi gyeelksksk ilalldeefk nvdsldtgke
      121 gwvmfdvtpf yaqsggqcgd sgkivgkanv ldtqkfhgln
//
LOCUS       WP_258033108             151 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein, partial [Campylobacter concisus].
ACCESSION   WP_258033108
VERSION     WP_258033108.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 151)
  AUTHORS   Aravind,L., Leipe,D.D. and Koonin,E.V.
  TITLE     Toprim--a conserved catalytic domain in type IA and II
            topoisomerases, DnaG-type primases, OLD family nucleases and RecR
            proteins
  JOURNAL   Nucleic Acids Res 26 (18), 4205-4213 (1998)
   PUBMED   9722641
REFERENCE   2  (residues 1 to 151)
  AUTHORS   Szafranski,P., Smith,C.L. and Cantor,C.R.
  TITLE     Cloning and analysis of the dnaG gene encoding Pseudomonas putida
            DNA primase
  JOURNAL   Biochim Biophys Acta 1352 (3), 243-248 (1997)
   PUBMED   9224947
REFERENCE   3  (residues 1 to 151)
  AUTHORS   Bergerat,A., de Massy,B., Gadelle,D., Varoutas,P.C., Nicolas,A. and
            Forterre,P.
  TITLE     An atypical topoisomerase II from Archaea with implications for
            meiotic recombination
  JOURNAL   Nature 386 (6623), 414-417 (1997)
   PUBMED   9121560
REFERENCE   4  (residues 1 to 151)
  AUTHORS   Versalovic,J. and Lupski,J.R.
  TITLE     The Haemophilus influenzae dnaG sequence and conserved bacterial
            primase motifs
  JOURNAL   Gene 136 (1-2), 281-286 (1993)
   PUBMED   8294018
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013878.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01751.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..>151
                     /product="toprim domain-containing protein"
     Region          <1..>149
                     /region_name="gyrB"
                     /note="DNA gyrase subunit B; Provisional; PRK14939"
                     /db_xref="CDD:237860"
ORIGIN      
        1 elylvegdsa ggsakqgrdr vfqailplkg kilnvekarl dkilksdeik nmitalgcgi
       61 gdefdaeklr yhkiiimtda dvdgshiqtl lltfffrfln kvvenghiyl aqpplyrykk
      121 gkkeiylkde kalnefliet giegvdiegi g
//
LOCUS       WP_258033118             240 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor plug domain-containing protein
            [Campylobacter concisus].
ACCESSION   WP_258033118
VERSION     WP_258033118.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 240)
  AUTHORS   Oke,M., Sarra,R., Ghirlando,R., Farnaud,S., Gorringe,A.R.,
            Evans,R.W. and Buchanan,S.K.
  TITLE     The plug domain of a neisserial TonB-dependent transporter retains
            structural integrity in the absence of its transmembrane
            beta-barrel
  JOURNAL   FEBS Lett 564 (3), 294-300 (2004)
   PUBMED   15111112
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07715.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..240
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /calculated_mol_wt=25830
     Region          25..>237
                     /region_name="FhuE"
                     /note="Outer membrane receptor for ferric coprogen and
                     ferric-rhodotorulic acid [Inorganic ion transport and
                     metabolism]; COG4773"
                     /db_xref="CDD:443805"
ORIGIN      
        1 msykisvatc aallmcsgfl sqvfavqttk legvevnsvg dnisesgide gilskrvaag
       61 pladkkvldm pyqvntiske vldnqgvqgf edavryfpsa siqyrgggdv grpqtrgfqg
      121 svvgnvlwdg fyassttaip mamfeslqiq nglagslygg atpsgyflys rkrpvplqnv
      181 iwtdyssrsn lgvgldssnk fekvgyrgvf yysggeknak dskfsrrlas lgldftlqri
//
LOCUS       WP_258033131             167 aa            linear   BCT 02-MAR-2025
DEFINITION  MATE family efflux transporter, partial [Campylobacter concisus].
ACCESSION   WP_258033131
VERSION     WP_258033131.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01554.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..>167
                     /product="MATE family efflux transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <1..167
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 liaraiacfv ivyllldikl klhirksliy kfdyeiikki lnigvpygle nsmfyvgrii
       61 vlslvslfgs asiaanavgg tivmfqvlpg maigtglsvv varcigandf nqakfyvrks
      121 mlsiyivqlf stavvllfle pllrvytlss eaiiltkhnl wypviai
//
LOCUS       WP_258033133             171 aa            linear   BCT 02-MAR-2025
DEFINITION  type IV secretion system DNA-binding domain-containing protein,
            partial [Campylobacter concisus].
ACCESSION   WP_258033133
VERSION     WP_258033133.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 171)
  AUTHORS   Gomis-Ruth,F.X., Moncalian,G., de la Cruz,F. and Coll,M.
  TITLE     Conjugative plasmid protein TrwB, an integral membrane type IV
            secretion system coupling protein. Detailed structural features and
            mapping of the active site cleft
  JOURNAL   J Biol Chem 277 (9), 7556-7566 (2002)
   PUBMED   11748238
REFERENCE   2  (residues 1 to 171)
  AUTHORS   Gomis-Ruth,F.X., Moncalian,G., Perez-Luque,R., Gonzalez,A.,
            Cabezon,E., de la Cruz,F. and Coll,M.
  TITLE     The bacterial conjugation protein TrwB resembles ring helicases and
            F1-ATPase
  JOURNAL   Nature 409 (6820), 637-641 (2001)
   PUBMED   11214325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021897.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10412.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..>171
                     /product="type IV secretion system DNA-binding
                     domain-containing protein"
     Region          <1..161
                     /region_name="VirB4"
                     /note="Type IV secretory pathway, VirB4 component
                     [Intracellular trafficking, secretion, and vesicular
                     transport]; COG3451"
                     /db_xref="CDD:442674"
ORIGIN      
        1 myvfhrlknq aknsenirgf fcfidelkdy lrdevmseki legilewrki ggvgcfgfqn
       61 islfngnerg ssfldnianf lifptnnedt lnqlseiigl tpteakflkd tqsnarqvll
      121 nmklrnesak lnvnlsslgn ylrvfssssd svnlikklkt espihwrkyy i
//
LOCUS       WP_258033157             245 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Campylobacter concisus].
ACCESSION   WP_258033157
VERSION     WP_258033157.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 245)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 245)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012234.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00004.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..245
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=28415
     Region          <2..219
                     /region_name="SpoVK"
                     /note="AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell
                     wall/membrane/envelope biogenesis, Cell cycle control,
                     cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG0464"
                     /db_xref="CDD:440232"
ORIGIN      
        1 mpgtgktffp kcfagelgrl liqlnislil essepitkln sifeyladry rknpdekyvi
       61 lideiekmig ngdpkekril grllsvlndf nteaseydfn aivfatandl ntildnnpef
      121 lrrgrwdelf finlptheya qeifniyikk lnigfiyqif didelfseie kkyqrdnnvs
      181 arfpytaaei enfckridfv rkakgvenit kqdivecvem iipivktare ginrmvgqke
      241 lftei
//
LOCUS       WP_258033170             280 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Campylobacter concisus].
ACCESSION   WP_258033170
VERSION     WP_258033170.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02371.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..>280
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          2..280
                     /region_name="COG3547"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442768"
ORIGIN      
        1 mdvcfltsit sekakfetlp nnhelikvyf dsfkndeilv vfeatsnyhl alqkalsdlg
       61 irycvtnpyk sslflkhlst iktdtsdsyg lavyartfks eiapdkynae yleiksynst
      121 lnllqkintq lknfkssqkt lnnkviddvi anlikeivkl qamlqklafd lvkktipete
      181 eiikenkgfg idlalnlfpq lhfnrdksek qfisfiglsp rifqsgssvh ksqkinkmgn
      241 snirrilfmt alcairfnak fklryerlla ngkkkmtaiv
//
LOCUS       WP_258033180              81 aa            linear   BCT 02-MAR-2025
DEFINITION  isocitrate/isopropylmalate family dehydrogenase, partial
            [Campylobacter concisus].
ACCESSION   WP_258033180
VERSION     WP_258033180.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012407.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00180.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..81
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /GO_function="GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
     Region          <1..81
                     /region_name="Iso_dh"
                     /note="Isocitrate/isopropylmalate dehydrogenase; cl00445"
                     /db_xref="CDD:444908"
ORIGIN      
        1 ihgsapdiag qgianpiati lsaammlrya fgeseaadai esavktalak gyrtkdiaaf
       61 naveicstse igdviagfik k
//
LOCUS       WP_258033195             217 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding protein, partial [Campylobacter concisus].
ACCESSION   WP_258033195
VERSION     WP_258033195.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 217)
  AUTHORS   Mittl,P.R. and Schulz,G.E.
  TITLE     Structure of glutathione reductase from Escherichia coli at 1.86 A
            resolution: comparison with the enzyme from human erythrocytes
  JOURNAL   Protein Sci 3 (5), 799-809 (1994)
   PUBMED   8061609
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013086.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00890.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..>217
                     /product="FAD-binding protein"
     Region          <9..216
                     /region_name="flavo_cyto_c"
                     /note="flavocytochrome c; TIGR01813"
                     /db_xref="CDD:273816"
ORIGIN      
        1 mqqvpylkdn ietvsqpgat sgalvaamkl ganpiqlswi qlnpytnpte rgfgtsalft
       61 nhcandygls vnpktgkrfm nehagrkvks daifacmaqs dkndnypvni cdqaavdann
      121 iaytkkgvee gsikkfntle elakaynipl epfletiknf neyvknekdp efgkpltkad
      181 vngigitkap fyasettpki lycmggiein tkaqvis
//
LOCUS       WP_258033209              90 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Campylobacter concisus].
ACCESSION   WP_258033209
VERSION     WP_258033209.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 90)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 90)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 90)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 90)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..90
                     /product="ATP-binding protein"
     Region          <1..86
                     /region_name="WalK"
                     /note="Sensor histidine kinase WalK [Signal transduction
                     mechanisms]; COG5002"
                     /db_xref="CDD:444026"
ORIGIN      
        1 lnltltktna llfvkddgvg iskkdseliw nkfyqvessr nksqnrgsgl glaiaaniak
       61 mhgaklgvks eagagsefwa efdlvnlkqv
//
LOCUS       WP_258033143              46 aa            linear   BCT 02-MAR-2025
DEFINITION  tautomerase family protein [Campylobacter concisus].
ACCESSION   WP_258033143
VERSION     WP_258033143.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 46)
  AUTHORS   Roper,D.I., Subramanya,H.S., Shingler,V. and Wigley,D.B.
  TITLE     Preliminary crystallographic analysis of 4-oxalocrotonate
            tautomerase reveals the oligomeric structure of the enzyme
  JOURNAL   J Mol Biol 243 (4), 799-801 (1994)
   PUBMED   7966298
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013522.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01361.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..46
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..46
                     /product="tautomerase family protein"
                     /GO_function="GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /GO_process="GO:0008152 - metabolic process [Evidence
                     IEA]"
                     /calculated_mol_wt=5048
     Region          <1..32
                     /region_name="4Oxalocrotonate_Tautomerase"
                     /note="4-Oxalocrotonate Tautomerase: Catalyzes the
                     isomerization of unsaturated ketones. The structure is a
                     homohexamer that is arranged as a trimer of dimers. The
                     hexamer contains six active sites, each formed by residues
                     from three monomers, two from one...; cl00235"
                     /db_xref="CDD:444774"
ORIGIN      
        1 mseilgrsaq ntvviideid tnnygiages vknlrkkqke qkevkc
//
LOCUS       WP_258033233             265 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein, partial
            [Campylobacter concisus].
ACCESSION   WP_258033233
VERSION     WP_258033233.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..>265
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          1..>265
                     /region_name="type_I_sec_LssB"
                     /note="type I secretion system ATPase, LssB family;
                     TIGR03375"
                     /db_xref="CDD:274550"
ORIGIN      
        1 iitpdlatgt rrietrkvkd eylgyayylk refvpedtss tklidagndh wfwgtlkrsk
       61 kiyfdvvias fiinlfvlas plftmnvydr vvpnnavetl wvlalgvsvv ygidlflkfv
      121 rsyfleiagk ksdiimssil fervmdmkfs nkpksvgsfa snlkefdtvr nffssaslaa
      181 ivdlpfalif livtyfigsy lvlvpivimi ailcytffik dplqnaikst feasamkngi
      241 lieslsslet iktlgasghv qwnwe
//
LOCUS       WP_258033291             261 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Campylobacter
            concisus].
ACCESSION   WP_258033291
VERSION     WP_258033291.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 261)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..261
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=29490
     Region          <14..261
                     /region_name="TonB-copper"
                     /note="TonB-dependent copper receptor; TIGR01778"
                     /db_xref="CDD:273801"
ORIGIN      
        1 mqnlrvylac qviwerfnal ygtgdkgwia npnleperhn ravlgfkfgs efykeylnsl
       61 qnkdafsfsg hfiadsvknl iifdrrhska pmslnknavi srnvdatlys vnfnteysfa
      121 rhfglkssly ynygqnktdg rslyqirpfe anfafdykdy asfgsynlgt alrlvskqtr
      181 gdfskqnglg idkkeaakgf glldlyggve fknkvgirfg vanlfdkdya efisgdhvaa
      241 ldpvvvhapg rtffisfhss f
//
LOCUS       WP_258033389             543 aa            linear   BCT 02-MAR-2025
DEFINITION  4Fe-4S binding protein [Campylobacter concisus].
ACCESSION   WP_258033389
VERSION     WP_258033389.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012267.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00037.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..543
                     /product="4Fe-4S binding protein"
                     /calculated_mol_wt=60568
     Region          25..239
                     /region_name="NapF"
                     /note="Ferredoxin [Energy production and conversion];
                     COG1145"
                     /db_xref="CDD:440760"
     Region          405..524
                     /region_name="PRK12387"
                     /note="formate hydrogenlyase complex iron-sulfur subunit;
                     Provisional"
                     /db_xref="CDD:183492"
     Region          <408..>451
                     /region_name="PRK10882"
                     /note="hydrogenase 2 operon protein HybA"
                     /db_xref="CDD:236786"
ORIGIN      
        1 mlneqieinn ekeeylvsns pklkaniiap einfylkntt asvlkkaknt lllyearata
       61 fdmakdvdye kevgknvviv snsgreelan llkengykvi elthfevkfi ygaagelsvl
      121 ilrandefev dcdfflvena rdymlkqsgc yeiagledea vlkilnektp kfkyksltqy
      181 dssicqyher rneicgrcvd vcptvailke detkhlvfsq idcvncgnci svcpsgslds
      241 tlmpqnsfat iaklykgkip liisnetnld elnislpenv lpffisaphm lnqahlltll
      301 qesgtsailf sktlgkgekd aisilnqiye lkfketaiyh akdknelees lkkakfisds
      361 qhtineyalp kreifakrlk flvgsedlgv vksgemiryg dvkintdsct lclscvgacn
      421 vsalvadkkt nsilfnpsvc tacgycelsc aekdtislei gkislkpeff tynelardel
      481 facvecgkef atkkavekia timqprfgnd rvkikalycc adckaklmvq aqinamkedl
      541 lng
//
LOCUS       WP_258033372              69 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2625 family protein [Campylobacter concisus].
ACCESSION   WP_258033372
VERSION     WP_258033372.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022399.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10946.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..69
                     /product="DUF2625 family protein"
                     /calculated_mol_wt=8248
     Region          <3..69
                     /region_name="DUF2625"
                     /note="Protein of unknown function DUF2625; cl08177"
                     /db_xref="CDD:415472"
ORIGIN      
        1 mpcgniskfy elyrwdgwte dvrnfsldrm ifvlppilwq dtnislrlkd mkkdsicmne
       61 yfnfafksv
//
LOCUS       WP_258033503             118 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphoethanolamine transferase domain-containing protein
            [Campylobacter concisus].
ACCESSION   WP_258033503
VERSION     WP_258033503.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 118)
  AUTHORS   Reynolds,C.M., Kalb,S.R., Cotter,R.J. and Raetz,C.R.
  TITLE     A phosphoethanolamine transferase specific for the outer
            3-deoxy-D-manno-octulosonic acid residue of Escherichia coli
            lipopolysaccharide. Identification of the eptB gene and Ca2+
            hypersensitivity of an eptB deletion mutant
  JOURNAL   J Biol Chem 280 (22), 21202-21211 (2005)
   PUBMED   15795227
REFERENCE   2  (residues 1 to 118)
  AUTHORS   Tran,A.X., Karbarz,M.J., Wang,X., Raetz,C.R., McGrath,S.C.,
            Cotter,R.J. and Trent,M.S.
  TITLE     Periplasmic cleavage and modification of the 1-phosphate group of
            Helicobacter pylori lipid A
  JOURNAL   J Biol Chem 279 (53), 55780-55791 (2004)
   PUBMED   15489235
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019631.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08019.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..118
                     /product="phosphoethanolamine transferase
                     domain-containing protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=13502
     Region          4..>110
                     /region_name="OpgE"
                     /note="Phosphoethanolamine transferase for periplasmic
                     glucans OpgE, AlkP superfamily [Cell
                     wall/membrane/envelope biogenesis]; COG2194"
                     /db_xref="CDD:441797"
ORIGIN      
        1 mlninkirhv sfvkflilfv aymffinyif lfkgvflgfl sddtlsfsil lfallsiffl
       61 llfagvfcil lvpfllkpla iflimissis ayfmktygvi idksmllnvl hicsayrd
//
LOCUS       WP_258033557             395 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase regulatory domain-containing protein
            [Campylobacter concisus].
ACCESSION   WP_258033557
VERSION     WP_258033557.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021624.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10119.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..395
                     /product="methyltransferase regulatory domain-containing
                     protein"
                     /calculated_mol_wt=45560
     Region          1..>210
                     /region_name="COG4797"
                     /note="Predicted regulatory domain of a methyltransferase
                     [General function prediction only]"
                     /db_xref="CDD:443825"
ORIGIN      
        1 mpdfvkeail kvvrenlstn gvafisynvy pgwkvkdiar dimllaakdk egmqerlkaa
       61 keallvykey llskdnitye nkmptrmllf wideilakdd fyiahefled indpfyfkdf
      121 namlaknelt ylceytlddi ftpdvgtavv deyknnkfkd ridleqfmdm isnkvfrqsl
      181 vvhsktyesi ankqigpsdi nkihvvadfi kkdnqwqdsy gampqdiswl cevfykmypa
      241 sinlsqilei lpedklmays afvriltnss damivkdeqk nieykpgysr lsvnltnyvk
      301 yflnhknnad vafankfsil gkfntvdyyi lllldgknsl eevaakalkf ikesnenild
      361 idgkvlkkdk vaanimnyvl gtakmastfy lleei
//
LOCUS       WP_258033534             243 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Campylobacter
            concisus].
ACCESSION   WP_258033534
VERSION     WP_258033534.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 243)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..>243
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <65..>243
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
ORIGIN      
        1 ssyllkiilk lktgllsffd llnhktnkaq pieitskdef gqmaelinkn tkaiedgmkd
       61 qsifiqkant fvneikdgny easleadtnn palnqlkstf kdlqlalkna issngkdvld
      121 llntyknqdf tkrldddgki asginslgie iskmlndnln qaqvleekak llassvskva
      181 ssantqansl qesaaaveqm sssmnaisqk tadvirqsde ikniitiird iadqtnllal
      241 naa
//
LOCUS       WP_258033561             692 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Campylobacter concisus].
ACCESSION   WP_258033561
VERSION     WP_258033561.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 692)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..692
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=79362
     Region          <242..687
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mllrahssya yldvffmlpm isilagvsif lyskfaasqe klaiimdsis vffliviliy
       61 gifdeidils minnrsnivf lsivvinfli lfitlseift ssllhikisg fylisasilf
      121 tmlnlfifys qisnvnfghk idflyivpff flmigafhlk akneyvtntd kdisigskwl
      181 piiivlplll qedltsfsal islfilvvna iinyyvkssi asrkildyer nlhremeksm
      241 hertnelmla nlrlqdmsek dyltdlgnrn fivnelermc ksisedeeia vyyinlsrfk
      301 sintsyghei gdrilklvak rilevcnrqe aiarisadef ivlakmeins htkrlnlgia
      361 lkdaiekpiq idryhfglkc iigidvatkn stanprniik nadmamyyak knpalnpmvy
      421 sdkisnemhl sssieialkk anlqedlhvy fqpifdlkie kmiyaevfly wksekfglme
      481 askfmkevnv nsdilndics llvsktieyv drwqkeklli pkisinvaqi qsksekfvld
      541 fvsslrshhi npelfeiefg eeiwtnnskt ldkifsvlke nnidvcidnf gsgytsfiyi
      601 rkygvkriki asefvaqasn skidaqivsa iidlakamki kvgakgveke edvrflkeld
      661 cnevqglfls rpmsaeefed lvrqdpqmia kv
//
LOCUS       WP_258033564             126 aa            linear   BCT 02-MAR-2025
DEFINITION  LysE/ArgO family amino acid transporter [Campylobacter concisus].
ACCESSION   WP_258033564
VERSION     WP_258033564.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 126)
  AUTHORS   Vrljic,M., Garg,J., Bellmann,A., Wachi,S., Freudl,R., Malecki,M.J.,
            Sahm,H., Kozina,V.J., Eggeling,L., Saier,M.H. Jr., Eggeling,L. and
            Saier,M.H. Jr.
  TITLE     The LysE superfamily: topology of the lysine exporter LysE of
            Corynebacterium glutamicum, a paradyme for a novel superfamily of
            transmembrane solute translocators
  JOURNAL   J Mol Microbiol Biotechnol 1 (2), 327-336 (1999)
   PUBMED   10943564
REFERENCE   2  (residues 1 to 126)
  AUTHORS   Zakataeva,N.P., Aleshin,V.V., Tokmakova,I.L., Troshin,P.V. and
            Livshits,V.A.
  TITLE     The novel transmembrane Escherichia coli proteins involved in the
            amino acid efflux
  JOURNAL   FEBS Lett 452 (3), 228-232 (1999)
   PUBMED   10386596
REFERENCE   3  (residues 1 to 126)
  AUTHORS   Aleshin,V.V., Zakataeva,N.P. and Livshits,V.A.
  TITLE     A new family of amino-acid-efflux proteins
  JOURNAL   Trends Biochem Sci 24 (4), 133-135 (1999)
   PUBMED   10322417
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10003422
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..126
                     /product="LysE/ArgO family amino acid transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015171 - amino acid transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /calculated_mol_wt=13858
     Region          1..>120
                     /region_name="ArgO"
                     /note="Arginine exporter protein ArgO [Amino acid
                     transport and metabolism]; COG1279"
                     /db_xref="CDD:440890"
ORIGIN      
        1 msafwsgfft slslilaiga qnafvlkqgi kkehifavcl icalgdalli fagvfgfakv
       61 lqkfeffkqv aiyggfiflf vyslkslyga fknpksllps aqheskfski vlltlaftwl
      121 kssrls
//
LOCUS       WP_258033604             243 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Campylobacter concisus].
ACCESSION   WP_258033604
VERSION     WP_258033604.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 243)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 243)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 243)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..243
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=27286
     Region          <8..218
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(26..27,30,56)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238347"
ORIGIN      
        1 mkqsscqktq vvfgpvgmmf denskaqles adiavvkidk fqsikeiqds fskiaeiwge
       61 ksvkrarefn dyfnenikfv sqktanltpk krvlvlnyns gnfntisskd igaeyisvag
      121 ginlsselsd gdfkiskain eeqviifnpd iiitnsqksa daiakntsfa klkavqngei
      181 fvvpsgvylw svrsaegaly plwlaktfyp eqfsdlnleq ktkefyerfy nyklsdselk
      241 ekg
//
LOCUS       WP_258033647              88 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Campylobacter concisus].
ACCESSION   WP_258033647
VERSION     WP_258033647.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 88)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07883.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..88
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=9798
     Region          <2..76
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 msvpfvhshk qneelyiile gdgelfidge vlkvskgdvl ridpegkrcf ragksgikmi
       61 ciqskkdsle qytmsdgvmv tdvkpnwl
//
LOCUS       WP_258033674             308 aa            linear   BCT 02-MAR-2025
DEFINITION  polymorphic toxin type 50 domain-containing protein, partial
            [Campylobacter concisus].
ACCESSION   WP_258033674
VERSION     WP_258033674.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 308)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026880.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15542.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..308
                     /product="polymorphic toxin type 50 domain-containing
                     protein"
     Region          210..304
                     /region_name="Ntox50"
                     /note="Bacterial toxin 50; pfam15542"
                     /db_xref="CDD:406083"
ORIGIN      
        1 ssndlyniel atnfikqssf yntsldntna fnpnkkqyed rymyalnayn nedfykdnls
       61 vktnpgildy tkstmyglgg favggiegla dlgniilhpv daingldnaf yhpilttknv
      121 naniqefiak nfvdsvlgdq ssinyrsyha lgenigslga agkaaikvgn klsnvnlskk
      181 gatadkttnn nlnsngndgi vvaggksvki dinkqnkhiq gtneyktanq ngvtrsilte
      241 dvenllpkfg tgqkvnsvei glagskerid fgkvigyyid engnklsttk givhygknga
      301 hivpsnpn
//
LOCUS       WP_258033699              77 aa            linear   BCT 02-MAR-2025
DEFINITION  DJ-1/PfpI family protein [Campylobacter concisus].
ACCESSION   WP_258033699
VERSION     WP_258033699.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 77)
  AUTHORS   Ohnishi,Y., Yamazaki,H., Kato,J.Y., Tomono,A. and Horinouchi,S.
  TITLE     AdpA, a central transcriptional regulator in the A-factor
            regulatory cascade that leads to morphological development and
            secondary metabolism in Streptomyces griseus
  JOURNAL   Biosci Biotechnol Biochem 69 (3), 431-439 (2005)
   PUBMED   15784968
REFERENCE   2  (residues 1 to 77)
  AUTHORS   Halio,S.B., Blumentals,I.I., Short,S.A., Merrill,B.M. and
            Kelly,R.M.
  TITLE     Sequence, expression in Escherichia coli, and analysis of the gene
            encoding a novel intracellular protease (PfpI) from the
            hyperthermophilic archaeon Pyrococcus furiosus
  JOURNAL   J Bacteriol 178 (9), 2605-2612 (1996)
   PUBMED   8626329
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01965.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..77
                     /product="DJ-1/PfpI family protein"
                     /calculated_mol_wt=8251
     Region          <1..>75
                     /region_name="GAT_1"
                     /note="Type 1 glutamine amidotransferase (GATase1)-like
                     domain; cl00020"
                     /db_xref="CDD:469582"
     Site            36
                     /site_type="active"
                     /note="conserved cys residue [active]"
                     /db_xref="CDD:153222"
ORIGIN      
        1 mllpggqgtr alvndsefil rlkecvlask fclsvctgsa liartgelng lkatsnkrsl
       61 ewvkscglav kwqerar
//
LOCUS       WP_258033729             343 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Campylobacter concisus].
ACCESSION   WP_258033729
VERSION     WP_258033729.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 343)
  AUTHORS   Das,A.K., Cohen,P.W. and Barford,D.
  TITLE     The structure of the tetratricopeptide repeats of protein
            phosphatase 5: implications for TPR-mediated protein-protein
            interactions
  JOURNAL   EMBO J 17 (5), 1192-1199 (1998)
   PUBMED   9482716
REFERENCE   2  (residues 1 to 343)
  AUTHORS   Lamb,J.R., Tugendreich,S. and Hieter,P.
  TITLE     Tetratrico peptide repeat interactions: to TPR or not to TPR?
  JOURNAL   Trends Biochem Sci 20 (7), 257-259 (1995)
   PUBMED   7667876
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019339.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07719.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..343
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=39407
     Region          64..>175
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          74..105
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(75,78..79,82..83,85,112,115..116,119..120,122..123,
                     146,149..150,153..154,157)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          110..140
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          145..169
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          301..327
                     /region_name="Rubredoxin_2"
                     /note="Rubredoxin metal binding domain; pfam18073"
                     /db_xref="CDD:436248"
ORIGIN      
        1 msvdiffigh rdpifsliil fsiilmiaal syawgifssk dekkriekfi rkfdskdgis
       61 sehkqmlqsp eidaqslcml gqtfakngdf eksisvylia lgkvrdknek efilnelgev
      121 yfkagflkka sevfekvlel sprnvlalrf ltmideklkn ykealyalns leelgvnvkd
      181 qkayikaist lddrnlsfne kveilshlsq nfellkrmil alfirhnenl enlkdfarfe
      241 dvidllynlk tpinlsnpky kslfyakgdi depceiygfe lnvikklkdt kfdaaglsfn
      301 yvckscknsf pmhfyrcpvc helgsvkils hitekaseds ntf
//
LOCUS       WP_258033853             268 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Campylobacter concisus].
ACCESSION   WP_258033853
VERSION     WP_258033853.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024118.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12706.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..268
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=30199
     Region          102..264
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(158,160,162..163,231..232,252)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 meifivivlf iasvfafmkf apvfggrpdv kskklieasp nfngkvfinl eptidmvkks
       61 pqasmlnfai qalfppkgkl pkcplpnlkf danalkngef iwlghvslic klddkiiitd
      121 pvlhrafplp vggkpfayeh aitasdypev idialishdh ydhldhktil elkdriakfl
      181 vplgvkahlv kwgvnegkiy efdwfgdlki gnlnftfcps rhfsgrtfkr nttlwggwav
      241 eeagfsfyfs gdggygkhfk minenwrl
//
LOCUS       WP_258033937            1350 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Campylobacter
            concisus].
ACCESSION   WP_258033937
VERSION     WP_258033937.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 1350)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 1350)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 1350)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 1350)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 1350)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 1350)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 1350)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 1350)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 1350)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1350
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..1350
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=154972
     Region          329..581
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          338..455
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cl21578"
                     /db_xref="CDD:473914"
     Site            order(365,369,375,388..389,390,414,419)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(385,389,396,399..400,426,428)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          <820..1233
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mqknsakpvl qifkrfyvki alllfafifl alfvifagin dikyeistln litrnnivnt
       61 fvevkdnitt karliangve pfyedtvvsk fytafyviak dnsllyerkf egafelhdyd
      121 iswfsdikag efrlsdrfyk nrrfkdiyia yglkngnkil vqlnpnllkn kvdtgynknl
      181 aayvflvdkd gnlsrdefyr kfikedfnky isqggefkad kiifklkdmn fykisyleeq
      241 klfvitgssr qaqifiqlvl vvlsflcfva fsilwlrdns yikdkilspf tritlfaadk
      301 skptdeefdi keftslnnsi kklyedrdka yetaqsyesr fgyvfeksfl kivvydaytg
      361 vitdisnall eklgykkddv adlnikelle eesknlaedr enainndlsy eaklrrknge
      421 iidvlatqss felentrlny ilikditqek mtqrnddiik syvflspnvi aiasaqepfl
      481 iiqstnnver ifnvqsqgli nlediiased fdsfkaavla skkaflqasf kneelnfian
      541 mtnaygkkip fkikakfida egqkviysft dlsdmlklqe rfekqskesk allwaseanv
      601 ftwdkrsdml nisdelskil gtqstlnfeq aksvfvdefd sfysffeslr daqtyikdik
      661 lysidkeilh frlrakaley defgevslik gtlrdlsled sffvcqdlla kifsfskeev
      721 vlldeemrvi dandaffesa gakdsvylkd itfikqglsd ikhqiietin qggswsgkvw
      781 sennknkskl evieilplid asekrtgyim lamlanneaq nekylefiay hdpltklpnr
      841 fllynklnsl iqkneqkiav iyldiddfkg indnfghqig dkflvaisek igamfngkni
      901 fariggdefv gvinyenlge vyeiaqnmlr lasdevkide lklkvsasig ialadselga
      961 ddvlqradwa myqakisgkn rsytfdakkd vyfksqyedg skilkaldag emflefqpei
     1021 sfstgetlsf ealirwrkdg eiiypsdflp lirtssassn ialftikeal larkmwleng
     1081 isakvrvnls vkklfteefw hkfkaifeed ksldptglii dvidaatatn levleiyvrk
     1141 ykelgihfsl ddfasysssi ealgmlktnr fnidnkfckh ifsskeales inmirfvadk
     1201 fglnatikni ddkrtlefll glgfdkfqgn ifslallakd aalfkferpy lhikdyknne
     1261 nfelfkglvv lkelanevia nlnqddkltq slkqkiedei knigkfnqei sinlnklass
     1321 sdsgelynla msiikecdin lgfskeirve
//
LOCUS       WP_258034036             443 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2809 domain-containing protein [Campylobacter concisus].
ACCESSION   WP_258034036
VERSION     WP_258034036.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022443.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10990.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..443
                     /product="DUF2809 domain-containing protein"
                     /calculated_mol_wt=52267
     Region          48..129
                     /region_name="DUF2809"
                     /note="Protein of unknown function (DUF2809); pfam10990"
                     /db_xref="CDD:431585"
     Region          <161..>240
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          188..233
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
ORIGIN      
        1 mredtkkail spmdasrsey cwdarmnwam tgiailafei fiaiyakdgf iryylgdvla
       61 aamlyafgra afrlppkila lavftlslvi eitqyfkvle ilgvqnyalw iifggtfdwt
      121 diicyaigcv layasenfig sehaiyneir ifrrkrlpkn fneilqsgdd ekikavfeiy
      181 dinatdkdgn tilhmlhank dikkkgpnsp yayadanlie wiimqggdin aknkkgetpl
      241 rnfmryvykn lkphqklviv gkqdyasrey ikqagevvni dfgimynyiy nllpeksqiy
      301 iwrhfgkrle ylyvpeyptd merydpqeys eftydfwmkf lrqkdsvqyk mihaatnlyr
      361 ywdyngeygs wilwddeytd kaaaeikkyf klgnrleeln dealdemfyd lrkswhaedv
      421 gkfrylfvlw llknpepffe dei
//
LOCUS       WP_258034056             100 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1287 domain-containing protein [Campylobacter concisus].
ACCESSION   WP_258034056
VERSION     WP_258034056.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018626.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06940.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..100
                     /product="DUF1287 domain-containing protein"
                     /calculated_mol_wt=11315
     Region          1..>100
                     /region_name="DUF1287"
                     /note="Domain of unknown function (DUF1287); cl01519"
                     /db_xref="CDD:470231"
ORIGIN      
        1 mkkflllalf vtqifafsas kfvndarsqi gvtlsydpsy erlaypmgdv dikkgvctdv
       61 varalrhqem dlqrlilkdl srnfasypkn gvkniyhrcv
//
LOCUS       WP_258034057            1317 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Campylobacter
            concisus].
ACCESSION   WP_258034057
VERSION     WP_258034057.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..1317
                     /product="Ig-like domain-containing protein"
     Region          <1..271
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          <198..707
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          <652..>998
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          746..827
                     /region_name="Big_13"
                     /note="Bacterial Ig-like domain; pfam19077"
                     /db_xref="CDD:465968"
     Region          850..>1287
                     /region_name="AidA"
                     /note="Autotransporter adhesin AidA [Cell
                     wall/membrane/envelope biogenesis, Intracellular
                     trafficking, secretion, and vesicular transport]; COG3468"
                     /db_xref="CDD:442691"
ORIGIN      
        1 igtgttddkg nfeittdpik pgdkvnvevt dkagnkgnge gtagniehpn dhtapsepti
       61 tfvedtnpkd gklnkaenss dgdnanttak isiptdavvg dvikytvngg aeeshtitna
      121 dktaghveik vpvtdgqtss vtakivdqag naskevsgsi dvdltasdap vitqvtdnqy
      181 ggiqdgknvl gidngltnds tptfkgtaep nttitlrngn diigkniqvd angdwsytpa
      241 plaegvynvt aiatdkagnd skpsnvatit vdlhsetpvi teivdnvagg vvngdvkggl
      301 tndntptlkg taepfatvei kidgrgsykf engevisnwt avadkdgnwe fttpklsdgh
      361 hnfeaqatdk agnnsqpsal vsvdvdttag apkvmitadk ddnsiltate asaltdgklk
      421 wviklpedak vgdrievans hrewvtiltl saadikagti trddfsadlv kgktgfqtps
      481 yrivdqagni saedadsvrf dktapkapvi keviddvkgy hddtrvgdvl kveggltndn
      541 tptikgtaea gikvdiydng nfigttkant ngnweftpsv saalpdgkhs itavaknald
      601 vesapsnaan idvdtvtpkp tidkitdnve ggvyhgdvkg gltndnrpvf egsaekgafi
      661 elfdngkvig ttkagedgkw tiqpkepmad gkhnmvvqat dlagnrsrsd qtssdvdttp
      721 gvvkitavcd dvagyngkvg nilgvnnglt ndstptikgt akpgttitik dgnsvidgvi
      781 kyngdgswef tpktpfadge hkltaiatsr tsgaqsvsnv atidvdttir ieltevtpit
      841 egttpgahis tpttnantis ggnyvsqgdk sdyvkvndwv sncakidlgn gndtlaiggl
      901 vengvvintg rgndkvtigk ylkgslvdlg egganivrtr iagisdeina afiikdkngl
      961 kigdgktdad gkfdmfidka ikpgeklsve ivdaagnkas dskaashiev sgvryydnel
     1021 dvgtnihaat vlagngndlv vvgekgkpdg yitanskidl gegdneirvr tnidhseikt
     1081 gsgddivttg lkgngfgyin neskidlgdg nnkltvgtni dhseiktgsg ddivnvgvng
     1141 idgyitghsk velgagnvll nirtnidcst vdtgtgndvv kvggyihssk vdlgagddtl
     1201 sigkvdlnns kvdggtgydk lvlenpdksv nlsdiskfak nfeeldisga knttlkvdik
     1261 dvldmtddkn tlkitgdkgd tvdlkgngwh qgasedgytt ytnntvtiqi kdeihvi
//
LOCUS       WP_258034144              71 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-dependent oxidoreductase [Campylobacter concisus].
ACCESSION   WP_258034144
VERSION     WP_258034144.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 71)
  AUTHORS   Li,R., Bianchet,M.A., Talalay,P. and Amzel,L.M.
  TITLE     The three-dimensional structure of NAD(P)H:quinone reductase, a
            flavoprotein involved in cancer chemoprotection and chemotherapy:
            mechanism of the two-electron reduction
  JOURNAL   Proc Natl Acad Sci U S A 92 (19), 8846-8850 (1995)
   PUBMED   7568029
  REMARK    Erratum:[Proc Natl Acad Sci U S A 1995 Nov 7;92(23):10815]
REFERENCE   2  (residues 1 to 71)
  AUTHORS   Fischl,A.S. and Kennedy,E.P.
  TITLE     Isolation and properties of acyl carrier protein phosphodiesterase
            of Escherichia coli
  JOURNAL   J Bacteriol 172 (9), 5445-5449 (1990)
   PUBMED   2168383
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014573.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02525.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..71
                     /product="NAD(P)H-dependent oxidoreductase"
                     /calculated_mol_wt=8002
     Region          2..>59
                     /region_name="FMN_red"
                     /note="NADPH-dependent FMN reductase; cl00438"
                     /db_xref="CDD:469770"
ORIGIN      
        1 mktliilahp diqnsvinkr llqealkepq rfsvhdltqv yaggnidaar eqelirahet
       61 lmnlvcrlll e
//
LOCUS       WP_258034156              77 aa            linear   BCT 02-MAR-2025
DEFINITION  polymorphic toxin type 50 domain-containing protein, partial
            [Staphylococcus aureus].
ACCESSION   WP_258034156
VERSION     WP_258034156.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 77)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026880.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15542.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..77
                     /product="polymorphic toxin type 50 domain-containing
                     protein"
     Region          <2..72
                     /region_name="Ntox50"
                     /note="Bacterial toxin 50; pfam15542"
                     /db_xref="CDD:406083"
ORIGIN      
        1 psytiidsne sekmtkkefi dipvlfddeg nfrikqvidy kkiigksyvn gkyietklgk
       61 vhysktgfhv vpyikke
//
LOCUS       WP_258034231             909 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein [Pectobacterium odoriferum].
ACCESSION   WP_258034231
VERSION     WP_258034231.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium odoriferum
  ORGANISM  Pectobacterium odoriferum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024554.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13155.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Pectobacterium odoriferum"
                     /db_xref="taxon:78398"
     Protein         1..909
                     /product="toprim domain-containing protein"
                     /calculated_mol_wt=98571
     Region          2..319
                     /region_name="DnaG"
                     /note="DNA primase (bacterial type) [Replication,
                     recombination and repair]; COG0358"
                     /db_xref="CDD:440127"
ORIGIN      
        1 mspdknlyhc fgcdaggsvl dwvmktegls lphavdklrg elgsvpaaap lppvsdiane
       61 qerqallhrv tdfyhhtlln apeaiaylek rrlnhpelva qfrlgfanrt lgyrlpsskl
      121 kdgatvrsql qaigvmrssg hehlagsivv pvidmngqvr elygrkvgdr lragtpnhly
      181 lpgphggvwn eqalvasksv ilceslidam sfwvagyrnv taaygvngft demrqafirh
      241 gvkqvliafd ndaagdegav klaeslaadg ivpfrvvfps gmdaneylcs vaepeaafgl
      301 lvdgalpmge vvsaesekya epqlenlsqs assleagvvv dalpdgevei alsgqqwrir
      361 gmasvkvgsg vmkvnaqvld tesgvvfads vdmmsarsra gyarlaasel glaesdikqr
      421 lgrvllalen hlsqpetnge svpeldddak adalallrdp nligrltddl aacgvvgest
      481 nlvagylaav srkldrplav liqsssaagk sslmdavlnl ippeerlqys amtgqslfyl
      541 getnlqhkil aiaeeegvrq aayalkllqs dgeltiastg kddatgnlvt kqytvkgpvm
      601 lmltttaidv deellnrclv ltvnesreqt eaihalqrhk qtlegllmen ekgyltelhq
      661 naqrllrplk vvnpfasqlt flsdktrtrr dhmkyltliq siallhqyqr evktvehrgt
      721 vieyievers divlanklah eilgrtldem ppqtrkllll iqgwiadsgq lkaalhftrk
      781 qlrdavqwgd tqlkihlarl veleylllhk rgltfcyell fdgdaqadnt hlcglidvpe
      841 aaeitekgqy davrsggnek rsasgrgavg srsdkaittk asagkgsaps grvngkstvp
      901 atqnkpivp
//
LOCUS       WP_258034234             199 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Pectobacterium odoriferum].
ACCESSION   WP_258034234
VERSION     WP_258034234.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium odoriferum
  ORGANISM  Pectobacterium odoriferum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 199)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 199)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Pectobacterium odoriferum"
                     /db_xref="taxon:78398"
     Protein         <1..>199
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          <1..>199
                     /region_name="vgr_GE"
                     /note="Rhs element Vgr protein; TIGR01646"
                     /db_xref="CDD:273730"
ORIGIN      
        1 giwfrfttdt rlnidvvafy dgqqgyekgl tlpsvppsgq hsdgvdavwg meshhnvvqk
       61 qvstrdynyr qatddmntqv datrgdatty gdayhyadny ltagntydrn papesgafya
      121 rirherylng qtqtraitsc ptlspgqvvk vtggyevaet fskgmvitam hsharrdedf
      181 gvsfdgipds tdfgfrpep
//
LOCUS       WP_258034235             120 aa            linear   BCT 02-MAR-2025
DEFINITION  Imm40 family immunity protein [Campylobacter concisus].
ACCESSION   WP_258034235
VERSION     WP_258034235.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 120)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15569.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     gene            1..120
                     /gene="imm40"
     Protein         1..120
                     /product="Imm40 family immunity protein"
                     /calculated_mol_wt=13774
     Region          33..115
                     /region_name="Imm40"
                     /note="Immunity protein 40; pfam15569"
                     /db_xref="CDD:373946"
ORIGIN      
        1 mdgydgkfmi idldfinilp qellnrgifl rdkigvyeig wkfddvikvl diikekemtv
       61 lggdvyelng deiiitydsw sfsgsnfiks fekaseyinn yyknngdnfi ytlivsnatk
//
LOCUS       WP_258034252             152 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Campylobacter
            concisus].
ACCESSION   WP_258034252
VERSION     WP_258034252.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 152)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..152
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..140
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            37..70
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 eqmsssmnai sqktadvirq sdeikniiti irdiadqtnl lalnaaieaa ragehgrgfa
       61 vvadevrkla ertqkslgei eantnvlaqs inemsesike qseginminq svaqidnltk
      121 envvianqan svtsevdema kaiveevrkk kf
//
LOCUS       WP_258034273            2459 aa            linear   BCT 02-MAR-2025
DEFINITION  hemagglutinin repeat-containing protein [Pectobacterium
            odoriferum].
ACCESSION   WP_258034273
VERSION     WP_258034273.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium odoriferum
  ORGANISM  Pectobacterium odoriferum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024728.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13332.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2459
                     /organism="Pectobacterium odoriferum"
                     /db_xref="taxon:78398"
     Protein         1..2459
                     /product="hemagglutinin repeat-containing protein"
                     /calculated_mol_wt=253399
     Region          1..>36
                     /region_name="ESPR"
                     /note="Extended Signal Peptide of Type V secretion system;
                     pfam13018"
                     /db_xref="CDD:463773"
     Region          69..338
                     /region_name="TPS"
                     /note="TPS secretion domain; pfam05860"
                     /db_xref="CDD:461762"
     Region          190..1815
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          307..324
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          326..358
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          379..408
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          410..429
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          430..448
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          450..468
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          470..489
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          491..508
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          510..530
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          532..550
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          576..594
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          631..648
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          650..669
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          671..689
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          691..708
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          711..729
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          731..746
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          754..772
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          774..793
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          795..825
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          827..845
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1692..1851
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          2200..2248
                     /region_name="PT-VENN"
                     /note="Pre-toxin domain with VENN motif; pfam04829"
                     /db_xref="CDD:428147"
ORIGIN      
        1 mnknlyriif nkargllmvv seinrgqgks sangvghtls qligrmkpta fltmtalglv
       61 tlapqalaag ivadksapgg qqpnvmqsan gtpqvniqtp saggvshnky tqfdvdnkga
      121 ilnnshkqvq tqmggwvagn pwlakgeaki ilnevnsrdp sklngyveva grkaqvvian
      181 pagiscdgcg finanratlt tgtpqmtnge lrgyrvgnge ivvegagmds srqdytdlia
      241 rtvkvnagiw akdmtvttgk nevaadnnkv dnnsatassa tesdvkptla idvaqlggmy
      301 agkirlvate qgvgvsnkgt lgtqagditi nangdivnsg tvnagqdlll ggkkvdnsgt
      361 lfaqrdhstt asdevtnsgl iaakgntrvr gatirnskga aiaagmktdg tlansgnltl
      421 asdgkltsqg qalaggnlna sasqidlsgs dtaahhatlt sssdiitdda qllasgdlkl
      481 svagklsndr gvinanalqv stpvisnrgg qllqsgdrdl qlnsnsinnq ngriaanakk
      541 fsvqsaslnn qggtimaags gsldvaasse lnnqngtlaa asdlaiatpv lnnnlgqisa
      601 nkqltldeqn tsalsraaat ssdlrisneg grlvagqqli frgreingsg eilslgdmdl
      661 sfadgfsntg ktlangdltl nvnnslinta llgaggklnv qasnidnqlt gelsaqqttl
      721 nasdtlsnrg lidgvltrin astvnnigtg riygdglaig aatlnnlaen nssatiaarq
      781 rldlgvgtln nhthsliysg gdlaiggnld engvasgkag slnnhsatie svgnmalsft
      841 alnnindnfv trfvqlsqkq kneymvvdln ngvhyspddy nisfyknevr hiciegvvcg
      901 rdhyyqysyt etvreeqiaq sdpakiiagg qislvgdkll ndksqiiagg slltavkelv
      961 ntevtgqklt ekvgqviewd rihkkgtdsq karasaytpp teiqsislsp svmkentqat
     1021 ssapsladya aqrvdvagqn tdvirsmtpd aslptgslft tlpdatssyl ietdprftnq
     1081 rtwlssdyml rqlqadpsit qkrlgdgfye qrlvreqive lvgqrylady tsdedqykgl
     1141 meagvsfakk fnlvpgvalt aeqmkqitqd mvwlvaqdvk mpdgttqnvl vpqvyaqvqq
     1201 gdmdgsgall agknisigvs ggmlnsgris atqlvsvsgd divnvggiia gksvslqatn
     1261 ditntggtvr atdtllaqag rditvasetn haesqngsnr fsrdnldrva gmyvqgddgk
     1321 lllqagrdvn lqaaqvvssg ensqtqiaat rdinmttitt gssdkvvwdk dnhvtqrltq
     1381 vqgsdvtsdg nitlnagnni naqaaklnad rqlaltatnd inlgsassqe yldmnskvkg
     1441 sgflskrttt tragydatla ngsslggeni sltagnnlni tgsdvaadrd lalragndln
     1501 vtaaeesrds wsmkkttksg lmssggigff vgsikessas dtaalthnns tlgsvdgdts
     1561 lvagnniavq gsdviagndi nmvannitid aannqsttdt tyerkqtglt lalsgaigsa
     1621 intaytsaka adeqqdgrma slqklksgla gvqaaqaavl asqnatdqna igvslslsts
     1681 kskseshsea vnasgstvqa gnninlvatg sengadgdlt iggsqlkagn dvllsanrdi
     1741 nllsaqntql qtgknsssgg gvgisigagq ggagisvfan askgsgneng dglthtettv
     1801 dagnkltvns grdttlrgaq lsadqvvanv grnltlqseq dvnnydskqk nssagasftf
     1861 gsmtgsvsan vakdkihsty nsvqeqtgif agdggfdinv gnhtqldgav igstasedkn
     1921 rlstgtlgfs nidnsaefev shssvgistg glgaqdllkn avqnlaangl gaggsdgnas
     1981 gttyaavspg sliirdqanq qqdvsalsrd vehanqsisp ifdkakeqqr lsrlrligdi
     2041 anqavditlt qgqiqannag ikeagewdgk ekrdvywnrv knteayksvs dqykaggdld
     2101 rgvraaaaai talaggdpak alaagaapym agvvkgmtvg fdedptagqi aanaighavl
     2161 ggvvaelsgt naaagaigat sgelaarair eylypgikte dlkpeertki snlaslagal
     2221 agglstdtss gvitahdssk navdnndlls pgmmswgsga vslakyeieq gktpeqvses
     2281 lriynrgtls enqdpvrgll qawgffmvna ltlgggstvt ggaitvngli ggaaninnqv
     2341 itmkpgekis ytdaliatgv savttgksfl atqvwgmsga yvgskikgdq dstgavtgag
     2401 vgnvagatts tiisgaagtk lpkpaadmlg stfgsavseg tgtviqkaid kkpqdqqgk
//
LOCUS       WP_258034298             143 aa            linear   BCT 02-MAR-2025
DEFINITION  type I restriction endonuclease, partial [Campylobacter concisus].
ACCESSION   WP_258034298
VERSION     WP_258034298.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 143)
  AUTHORS   Piekarowicz,A., Klyz,A., Kwiatek,A. and Stein,D.C.
  TITLE     Analysis of type I restriction modification systems in the
            Neisseriaceae: genetic organization and properties of the gene
            products
  JOURNAL   Mol Microbiol 41 (5), 1199-1210 (2001)
   PUBMED   11555298
REFERENCE   2  (residues 1 to 143)
  AUTHORS   Makovets,S., Doronina,V.A. and Murray,N.E.
  TITLE     Regulation of endonuclease activity by proteolysis prevents
            breakage of unmodified bacterial chromosomes by type I restriction
            enzymes
  JOURNAL   Proc Natl Acad Sci U S A 96 (17), 9757-9762 (1999)
   PUBMED   10449767
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016220.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04313.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..>143
                     /product="type I restriction endonuclease"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
     Region          2..>141
                     /region_name="COG0610"
                     /note="Type I site-specific restriction-modification
                     system, R (restriction) subunit and related helicases ...
                     [Defense mechanisms]"
                     /db_xref="CDD:440375"
ORIGIN      
        1 mtpdtsenki qqnsinllqs lgykfisree nlrlrgvkss evlfreiltk klgeingyey
       61 kgkrykfsqs nvlkavdela gvslneglmf aneritnlll lgtsleenle dgtrrsfsfk
      121 fidfenlqnn dfyvteefev srv
//
LOCUS       WP_258034165             143 aa            linear   BCT 02-MAR-2025
DEFINITION  CiaD-like domain-containing protein [Campylobacter concisus].
ACCESSION   WP_258034165
VERSION     WP_258034165.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 143)
  AUTHORS   Gabbert,A.D., Mydosh,J.L., Talukdar,P.K., Gloss,L.M.,
            McDermott,J.E., Cooper,K.K., Clair,G.C. and Konkel,M.E.
  TITLE     The Missing Pieces: The Role of Secretion Systems in Campylobacter
            jejuni Virulence
  JOURNAL   Biomolecules 13 (1), 135 (2023)
   PUBMED   36671522
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047040.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21862.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         1..143
                     /product="CiaD-like domain-containing protein"
                     /calculated_mol_wt=16254
ORIGIN      
        1 mvdkimkldd iarmaisevs aelekiealq skkqeelere nlkkellame tadeqvleep
       61 kveasvpsvq selepkvaqi lpksreisde eiflanlaer ievlfeglkq tseqdlsqrl
      121 elttkfleft lanienrlqn lsk
//
LOCUS       WP_258034313             162 aa            linear   BCT 02-MAR-2025
DEFINITION  AIR synthase-related protein, partial [Campylobacter concisus].
ACCESSION   WP_258034313
VERSION     WP_258034313.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 162)
  AUTHORS   Li,C., Kappock,T.J., Stubbe,J., Weaver,T.M. and Ealick,S.E.
  TITLE     X-ray crystal structure of aminoimidazole ribonucleotide synthetase
            (PurM), from the Escherichia coli purine biosynthetic pathway at
            2.5 A resolution
  JOURNAL   Structure 7 (9), 1155-1166 (1999)
   PUBMED   10508786
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014788.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02769.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..>162
                     /product="AIR synthase-related protein"
     Region          <1..162
                     /region_name="PurM-like"
                     /note="AIR (aminoimidazole ribonucleotide) synthase
                     related protein. This family includes Hydrogen
                     expression/formation protein HypE, AIR synthases, FGAM
                     (formylglycinamidine ribonucleotide) synthase and
                     Selenophosphate synthetase (SelD). The N-terminal
                     domain...; cl10019"
                     /db_xref="CDD:471963"
ORIGIN      
        1 svvcgdtkvv pkgkcdkifi ntagigeivc egvelknlka gakilisgdv grhggvvlaa
       61 reefelgldl ksdckslkev vlklfsagik pqtmrdatrg glsavlnewa kfskfdilvf
      121 eenikvtnev mgvcelfgfe pyelandgtf vmavdeseae da
//
LOCUS       WP_258034324             343 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramoyl-L-alanine amidase, partial [Pectobacterium
            odoriferum].
ACCESSION   WP_258034324
VERSION     WP_258034324.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium odoriferum
  ORGANISM  Pectobacterium odoriferum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 343)
  AUTHORS   Kuroda,A., Sugimoto,Y., Funahashi,T. and Sekiguchi,J.
  TITLE     Genetic structure, isolation and characterization of a Bacillus
            licheniformis cell wall hydrolase
  JOURNAL   Mol Gen Genet 234 (1), 129-137 (1992)
   PUBMED   1495475
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013670.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01520.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Pectobacterium odoriferum"
                     /db_xref="taxon:78398"
     Protein         <1..343
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /EC_number="3.5.1.28"
                     /GO_function="GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
     Region          <1..199
                     /region_name="PRK10431"
                     /note="N-acetylmuramoyl-l-alanine amidase II; Provisional"
                     /db_xref="CDD:236692"
     Region          152..343
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
     Region          236..278
                     /region_name="LysM"
                     /note="LysM domain; pfam01476"
                     /db_xref="CDD:396179"
ORIGIN      
        1 allnsdpafk gvltrdgdyf isvmgrsdva rkqganllvs ihadaapnrn akgasvwvls
       61 nrranseman wleqhekqse llggagdlla nssadpylsq avldlqfghs qrvgydvatk
      121 vlrelqrvgg lhkrrpehas lgvlrspdip sllvetgfit nvseerllgs ndyqeklana
      181 iyqglrsyfq thpmqsvpkt plpkqesrpl qsaasdtets ggnvtaakas agstrhtvar
      241 getlssiarr ygvslaamrd vnklnkdivw vgqrlnipat gtkqtastpa pkkaapvkhk
      301 vvkgdslsai aarygvsmke iqqannmrsg tvqlgqmlvi psa
//
LOCUS       WP_258034345             183 aa            linear   BCT 02-MAR-2025
DEFINITION  type 4 pilus major pilin [Pectobacterium odoriferum].
ACCESSION   WP_258034345
VERSION     WP_258034345.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium odoriferum
  ORGANISM  Pectobacterium odoriferum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 183)
  AUTHORS   Xu,X.F., Tan,Y.W., Lam,L., Hackett,J., Zhang,M. and Mok,Y.K.
  TITLE     NMR structure of a type IVb pilin from Salmonella typhi and its
            assembly into pilus
  JOURNAL   J Biol Chem 279 (30), 31599-31605 (2004)
   PUBMED   15159389
REFERENCE   2  (residues 1 to 183)
  AUTHORS   Tsui,I.S., Yip,C.M., Hackett,J. and Morris,C.
  TITLE     The type IVB pili of Salmonella enterica serovar Typhi bind to the
            cystic fibrosis transmembrane conductance regulator
  JOURNAL   Infect Immun 71 (10), 6049-6050 (2003)
   PUBMED   14500527
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020384.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08805.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Pectobacterium odoriferum"
                     /db_xref="taxon:78398"
     Protein         1..183
                     /product="type 4 pilus major pilin"
                     /calculated_mol_wt=19678
     Region          2..>68
                     /region_name="PulG"
                     /note="Type II secretory pathway, pseudopilin PulG [Cell
                     motility, Intracellular trafficking, secretion, and
                     vesicular transport, Extracellular structures]; COG2165"
                     /db_xref="CDD:441768"
     Region          41..149
                     /region_name="PilS"
                     /note="PilS N terminal; cl27040"
                     /db_xref="CDD:474887"
ORIGIN      
        1 mllqnrkyrk gfslleimlv lgviaglivs afmiypkaqa aqraeievkn itaivsgina
       61 iygsssnytg vnartlidak iipsqmrvgn tyqvvniwkg pvsfsygnss fsitysnvps
      121 vecarivlat asmfstisvg dnegydengn evgssgtvkq gvknidevtk ycsnemnvis
      181 fgy
//
LOCUS       WP_258034490             725 aa            linear   BCT 02-MAR-2025
DEFINITION  delta endotoxin C-terminal domain-containing protein, partial
            [Bacillus thuringiensis].
ACCESSION   WP_258034490
VERSION     WP_258034490.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 725)
  AUTHORS   Schnepf,E., Crickmore,N., Van Rie,J., Lereclus,D., Baum,J.,
            Feitelson,J., Zeigler,D.R. and Dean,D.H.
  TITLE     Bacillus thuringiensis and its pesticidal crystal proteins
  JOURNAL   Microbiol Mol Biol Rev 62 (3), 775-806 (1998)
   PUBMED   9729609
REFERENCE   2  (residues 1 to 725)
  AUTHORS   Li,J.D., Carroll,J. and Ellar,D.J.
  TITLE     Crystal structure of insecticidal delta-endotoxin from Bacillus
            thuringiensis at 2.5 A resolution
  JOURNAL   Nature 353 (6347), 815-821 (1991)
   PUBMED   1658659
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015877.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03944.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         <1..725
                     /product="delta endotoxin C-terminal domain-containing
                     protein"
                     /GO_function="GO:0090729 - toxin activity [Evidence IEA]"
     Region          21..151
                     /region_name="Endotoxin_C"
                     /note="delta endotoxin; pfam03944"
                     /db_xref="CDD:397849"
     Region          158..223
                     /region_name="Endotoxin_C2"
                     /note="Delta endotoxin; pfam18449"
                     /db_xref="CDD:436510"
     Region          227..411
                     /region_name="Cry1Ac_D5"
                     /note="Insecticidal delta-endotoxin CryIA(c) domain 5;
                     pfam17997"
                     /db_xref="CDD:375474"
     Region          445..>482
                     /region_name="Endotoxin_C2"
                     /note="Delta endotoxin; pfam18449"
                     /db_xref="CDD:436510"
ORIGIN      
        1 nkgkdsihpl kikelhnldf ynyhfngsvi sgpgftggdl vrlnrnngni qnrgyievpi
       61 qfsststryr vrvryasvtp ielnivvgng vifsntvpgt aasldnlqsg dfgdfevtnt
      121 ftsasgnivg lrnfsanadv iidrfefipv tatfeaesdl egarkavnal ftstnprglk
      181 tdvtdyhidq vsnlvvclsd efcldekrel leevkyakrl sdernllqdp nftsingqtd
      241 rgwigstgis iqggddvfke nyvtlpgtfd ecyptylyqk idesqlksyt ryqlrgyied
      301 sqdleiylir ynakhetlsv pgtespwpss gvypigkcge pnrcapriew npdldcscrd
      361 gekcahhshh fsldidvgci dlqenlgvwv vfkiktqegh arignlefie ekpllgeals
      421 rvkraekkwr nkreklqlet krvyteakea vgalfvdsqy drlqadtnig mihaadklvh
      481 rirevylsel svipgvnaei feelegriit aislydarnv vkngdfnngl acwnvkghvd
      541 vqqshhrsvl vipeweaevs qavrvcpgrg yilrvtayke gygegcvtih eienntdelk
      601 fknceeeevy ptdtgtcndy tahqgtagca dacnsrnvgy edayemntta svnykptyee
      661 etytdvrrdn hceydrgyvn yppvpagyvt keleyfpetd tvwieigete gtfivdsvel
      721 llmee
//
LOCUS       WP_258034479              65 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase, partial [Klebsiella pneumoniae].
ACCESSION   WP_258034479
VERSION     WP_258034479.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 65)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..65
                     /product="PfkB family carbohydrate kinase"
     Region          <1..64
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
ORIGIN      
        1 vqaidtiaag dtfngalvpa llegtalpea irfahaaaai avtrkgaqps vpwrteidef
       61 laqqg
//
LOCUS       WP_258034518              63 aa            linear   BCT 02-MAR-2025
DEFINITION  type II toxin-antitoxin system RelE/ParE family toxin, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_258034518
VERSION     WP_258034518.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 63)
  AUTHORS   Fiebig,A., Castro Rojas,C.M., Siegal-Gaskins,D. and Crosson,S.
  TITLE     Interaction specificity, toxicity and regulation of a paralogous
            set of ParE/RelE-family toxin-antitoxin systems
  JOURNAL   Mol Microbiol 77 (1), 236-251 (2010)
   PUBMED   20487277
REFERENCE   2  (residues 1 to 63)
  AUTHORS   Anantharaman,V. and Aravind,L.
  TITLE     New connections in the prokaryotic toxin-antitoxin network:
            relationship with the eukaryotic nonsense-mediated RNA decay system
  JOURNAL   Genome Biol 4 (12), R81 (2003)
   PUBMED   14659018
REFERENCE   3  (residues 1 to 63)
  AUTHORS   Roberts,R.C. and Helinski,D.R.
  TITLE     Definition of a minimal plasmid stabilization system from the
            broad-host-range plasmid RK2
  JOURNAL   J Bacteriol 174 (24), 8119-8132 (1992)
   PUBMED   1459960
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016876.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05016.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..63
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..63
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
     Region          1..63
                     /region_name="ParE"
                     /note="Plasmid stabilization system protein ParE
                     [Mobilome: prophages, transposons]; COG3668"
                     /db_xref="CDD:442885"
ORIGIN      
        1 lfdyiaenss lwdalnvtdr vlaaadnlad fprlyevdsr ygedvrrisl mgqhvlydvd
       61 dqt
//
LOCUS       WP_258034536             782 aa            linear   BCT 02-MAR-2025
DEFINITION  insecticidal delta-endotoxin Cry8Ea1 family protein, partial
            [Bacillus thuringiensis].
ACCESSION   WP_258034536
VERSION     WP_258034536.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 782)
  AUTHORS   Schnepf,E., Crickmore,N., Van Rie,J., Lereclus,D., Baum,J.,
            Feitelson,J., Zeigler,D.R. and Dean,D.H.
  TITLE     Bacillus thuringiensis and its pesticidal crystal proteins
  JOURNAL   Microbiol Mol Biol Rev 62 (3), 775-806 (1998)
   PUBMED   9729609
REFERENCE   2  (residues 1 to 782)
  AUTHORS   Li,J.D., Carroll,J. and Ellar,D.J.
  TITLE     Crystal structure of insecticidal delta-endotoxin from Bacillus
            thuringiensis at 2.5 A resolution
  JOURNAL   Nature 353 (6347), 815-821 (1991)
   PUBMED   1658659
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015878.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03945.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         1..>782
                     /product="insecticidal delta-endotoxin Cry8Ea1 family
                     protein"
                     /GO_function="GO:0090729 - toxin activity [Evidence IEA]"
                     /GO_process="GO:0001907 - symbiont-mediated killing of
                     host cell [Evidence IEA]"
     Region          35..243
                     /region_name="Endotoxin_N"
                     /note="delta endotoxin, N-terminal domain; pfam03945"
                     /db_xref="CDD:397850"
     Region          251..470
                     /region_name="Endotoxin_M"
                     /note="delta endotoxin; pfam00555"
                     /db_xref="CDD:395440"
     Region          472..617
                     /region_name="delta_endotoxin_C"
                     /note="delta-endotoxin C-terminal domain may be associated
                     with carbohydrate binding functionality; cd04085"
                     /db_xref="CDD:271151"
     Region          692..>777
                     /region_name="Cry1Ac_D5"
                     /note="Insecticidal delta-endotoxin CryIA(c) domain 5;
                     pfam17997"
                     /db_xref="CDD:375474"
ORIGIN      
        1 msegdyidsy inpgnvrtgl qtgidivavv vgalggpvgg iltgflstlf gflwpsndqa
       61 vweafieqme elieqrisdq vvrtalddlt giqnyynqyl ialkeweerp ngvranlvlq
      121 rfeilhalfv ssmpsfgsgp gsqrfqaqll vvyaqaanlh lllladaeky garwglresq
      181 ielyfnelqt rtrdytnhcv naynnglagl rgtsaeswlk yhqfrreatl mamdlialfp
      241 yyntrrypia vnpqltrevy tdplgvpsee sslfpelrcl rwqetsamtf snlenaiirp
      301 phlfdtinnl miytgsfrft nnqliegwig hsvtssllas gpttvvrrny gsttsivnyf
      361 sfndrdvyqi ntrshtglgf qnaplfgitr aqfypggtys vtqrnaltce qnynsidelp
      421 sldpnepisr syshrlshit sylhrvltid giniysgnlp tyvwthrdvd ltntitadri
      481 tqlplvksfe ipagttvvrg pgftggdilr rtgvgtfgti rvrttapltq ryrirfrfas
      541 ttnlfigirv gdrqvnyfdf grtmnrgdel ryesfatref ttdfnfrqpq elisvfanaf
      601 sagqevyfdr ieiipvnpar eakedleaak kavaslftrt rdglqvnvkd yqvdqaanlv
      661 sclsdeqygy dkkmlleavr aakrlsrern llqdpdfnti nsteengwka sngvtisegg
      721 pfykgralql asarenypty iyqkvdasel kpytryrldg fvkssqdlei dlihhhkvhl
      781 vk
//
LOCUS       WP_258034541             243 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator, partial [Bacillus thuringiensis].
ACCESSION   WP_258034541
VERSION     WP_258034541.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 243)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         1..>243
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
     Region          5..131
                     /region_name="CitB"
                     /note="DNA-binding response regulator DpiB of
                     citrate/malate metabolism [Transcription, Signal
                     transduction mechanisms]; COG4565"
                     /db_xref="CDD:443622"
     Region          <173..>205
                     /region_name="COG3355"
                     /note="Predicted transcriptional regulator
                     [Transcription]"
                     /db_xref="CDD:442583"
ORIGIN      
        1 mgeeievliv eddiriadih rrftekiegf kvigtattge qakewlelvk pqlvlldvyl
       61 pdmqgtelvt yirnhlhdtd iimitaasea dvvrhalrgg vtdyivkplm fdrfkasleg
      121 yqkkiiqlkk nnqlsteqie ylwsqrgvkg nemeyapkgi dpltlakikk hmltvneegi
      181 taevlssmvg vsrstarryl eylisgkkvh aeliygsvgr phahqlkdgy ktkfcsfelk
      241 spq
//
LOCUS       WP_258034542              41 aa            linear   BCT 02-MAR-2025
DEFINITION  colicin E3/pyocin S6 family cytotoxin, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_258034542
VERSION     WP_258034542.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 41)
  AUTHORS   Carr,S., Walker,D., James,R., Kleanthous,C. and Hemmings,A.M.
  TITLE     Inhibition of a ribosome-inactivating ribonuclease: the crystal
            structure of the cytotoxic domain of colicin E3 in complex with its
            immunity protein
  JOURNAL   Structure 8 (9), 949-960 (2000)
   PUBMED   10986462
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020569.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09000.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..41
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..41
                     /product="colicin E3/pyocin S6 family cytotoxin"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /GO_function="GO:0043022 - ribosome binding [Evidence
                     IEA]"
     Region          <4..41
                     /region_name="Cytotoxic"
                     /note="pfam09000"
                     /db_xref="CDD:401084"
ORIGIN      
        1 wygdkkrkiy ewdsqhgele gyracdgehl gafdpktgkq v
//
LOCUS       WP_258034634            2459 aa            linear   BCT 02-MAR-2025
DEFINITION  hemagglutinin repeat-containing protein [Pectobacterium
            odoriferum].
ACCESSION   WP_258034634
VERSION     WP_258034634.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium odoriferum
  ORGANISM  Pectobacterium odoriferum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024728.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13332.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2459
                     /organism="Pectobacterium odoriferum"
                     /db_xref="taxon:78398"
     Protein         1..2459
                     /product="hemagglutinin repeat-containing protein"
                     /calculated_mol_wt=253873
     Region          1..>36
                     /region_name="ESPR"
                     /note="Extended Signal Peptide of Type V secretion system;
                     pfam13018"
                     /db_xref="CDD:463773"
     Region          69..338
                     /region_name="TPS"
                     /note="TPS secretion domain; pfam05860"
                     /db_xref="CDD:461762"
     Region          190..1815
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          340..357
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          359..378
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          379..397
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          410..429
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          430..448
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          450..468
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          470..489
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          491..508
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          510..530
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          532..550
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          576..594
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          631..648
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          650..668
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          670..689
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          691..708
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          710..729
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          731..746
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          754..772
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          774..792
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          801..825
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          827..845
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1455..1599
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          1692..1851
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          2200..2248
                     /region_name="PT-VENN"
                     /note="Pre-toxin domain with VENN motif; pfam04829"
                     /db_xref="CDD:428147"
ORIGIN      
        1 mnknlyriif nkargllmvv seinrgqgks sangvghtls qligrmkpta fltmtalglv
       61 tlapqalaag ivadksapgg qqpnvmqsan gtpqvniqtp saggvshnky tqfdvdnkga
      121 ilnnshkqvq tqmggwvagn pwlakgeaki ilnevnsrdp sklngyveva grkaqvvian
      181 pagiscdgcg finanratlt tgtpqmtnge lrgyrvgnge ivvegagmds srqdytdlia
      241 rtvkvnagiw akdvtvttgk nevaadnnkv dnnsatassa tesdvkptla idvaqlggmy
      301 agkirlvate qgvgvsnkgt lgtqagditi nangdivnsg tvnagqdlll ggkkvdnsgt
      361 lfaqrdhstt asdevtnsgl iaakgntrvr gatirnskga aiaagmktdg tlansgnltl
      421 asdgkltsqg qalaggnlna sasqidlsgs dtaahhatlt sssdiitdda qllasgdlkl
      481 svagklsndr gvinanalqv ntpaisnrdg qllqsgdsdl qlrsdsinnq ngriaanakk
      541 fsvqsaslnn qsgtimaags gsldvaasre lnnqngtlaa asdlaiatpv lnnnlgqisa
      601 nkqltldqqn ssalsraaat ssdlrisneg grlvagqqlt frgreingsg eilslgdmdl
      661 sfadgfsnnn ktlangdltl nvnnslinta llgaggklnv qasnidnqvt gelsaqqttl
      721 nandtlsnrg lidgvltrin astvnnigtg riygdglaig aatlnnlaen nssatiaarq
      781 rfdlgvgtln nrdhsliysd gdlaiggnld engvasgkag nlnnhsatie svgnmalsft
      841 alnnindnfv trfvqlsqkq kneymvvsln ngvhyspddy nisfyknevr hiciegvvcg
      901 rdhyyqytyt etvreeqiaq sdpakiiagg qislsgdkll ndksqviagg slltavkelv
      961 ntevtgqklt ekvgqviewd rihkkgtdsq karasaytpp teiqsislsp svmkentqat
     1021 snapsladya aqrvdvaghn tdvirsmtpd tslptgslft plpdatssyl ietdprftnq
     1081 rtwlssdyml rqlqtdpsit qkrlgdgfye qrlvreqive lvgqrylady vsdedqykgl
     1141 meagvsfakk fnlvpgvalt aeqmkqitqd mvwlvaqdvk mpdgttqnvl vpqvyaqvqq
     1201 gdmdgsgall agknvsigvs ggmlnsgris atqlvsvsgd divnvggiia gksvslqatn
     1261 ditntggtvr atdtllaqag rditvasetn haesqngsnr fsrdnldrva gmyvqgddgk
     1321 lllqagrdvn lqaaqvvssg ensqtqiaat rdinmttitt gssdkvvwdk dnhvtqrltq
     1381 vqgsdvtsdg nitlnagnni naqaaklnad rqlaltatnd inlgsassqe yldmnskvkg
     1441 sgflskrttt tragydatla ngsslggeni sltagnnlni tgsdvaadrd lalragndln
     1501 vtaaeesrds wsmkkttksg lmssggigff vgsikessts dtaalthnns tlgsvdgdts
     1561 lvagnniavq gsdviagndi nmvannitid aannqsttdt tyerkqtglt lalsgaigsa
     1621 intaytsaka adeqqdgrma slqklksgla gvqaaqatvl aaqnttdqna igvslslsts
     1681 kskseshsea vnasgstvqa gnninlvatg sengtdgdlt iggsqlkagn dvllsanrdi
     1741 nllsaqntql qtgknsnsgg gigvsigagq ggagisvfan askgsgneng dglthtettv
     1801 dagnkltvns grdttlrgaq lsadqvvanv grnltlqseq dvnnydskqk nssagasftf
     1861 gsmtgsvsan vakdkihsty nsvqeqtgif agdggfdinv gnhtqldgav igstasedkn
     1921 rlstgtlgfs nidnsaefev shssvgistg glgaqdllkn avqnlaangl gaggsdgnas
     1981 gttyaavspg sliirdqanq qqdvsalsrd vehanqsisp ifdkakeqqr lsrlrligdi
     2041 anqavditlt qgqiqannag ikeagewdgk ekrdvywnrv knteayksvs dqykaggdld
     2101 rgvraaaaai talaggdpak alaagaapym agvvkgmtvg fdedptagqi aanaighavl
     2161 ggvvaelsgt naaagaigat sgelaarair eylypgikte dlkpeertki snlaslagal
     2221 agglstdtss gvitahdssk navdnndlls pgmmswgsga vslakyeieq gktpeqvses
     2281 lriynrgtls enqdpvrgll qawgffmvna ltlgggstvt ggaitvngli ggaaninnqv
     2341 itmkpgekis ytdaliatgv savttgksfl atqvwgmsga yvgskikgdq dstgavtgag
     2401 vgnvagatts tiisgaagtk lpkpaadmlg stfgsavseg tgtviqkaid kkpqdqqgk
//
LOCUS       WP_258034650             198 aa            linear   BCT 02-MAR-2025
DEFINITION  FecR domain-containing protein [Pectobacterium odoriferum].
ACCESSION   WP_258034650
VERSION     WP_258034650.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium odoriferum
  ORGANISM  Pectobacterium odoriferum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 198)
  AUTHORS   Van Hove,B., Staudenmaier,H. and Braun,V.
  TITLE     Novel two-component transmembrane transcription control: regulation
            of iron dicitrate transport in Escherichia coli K-12
  JOURNAL   J Bacteriol 172 (12), 6749-6758 (1990)
   PUBMED   2254251
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04773.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Pectobacterium odoriferum"
                     /db_xref="taxon:78398"
     Protein         1..198
                     /product="FecR domain-containing protein"
                     /calculated_mol_wt=21893
     Region          <1..195
                     /region_name="PRK09774"
                     /note="fec operon regulator FecR; Reviewed"
                     /db_xref="CDD:236622"
ORIGIN      
        1 mddgttllln tqtalnvayg ddlrqltlir gevmietgqa ekaalyprpf ivttaqgkvq
       61 algtrfslrv qdehtqvavy dgavrlhphq nsqdgqvvks gqtatfttqr cgqietakae
      121 pawvkgqlla dnqrlvdfvd elsryrsgvi rcqpeveslr fsgvfplsdt dnilaalvea
      181 lpvqvryfsr ywvqiaar
//
LOCUS       WP_258034665              63 aa            linear   BCT 02-MAR-2025
DEFINITION  HisA/HisF-related TIM barrel protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_258034665
VERSION     WP_258034665.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 63)
  AUTHORS   Copley,R.R. and Bork,P.
  TITLE     Homology among (betaalpha)(8) barrels: implications for the
            evolution of metabolic pathways
  JOURNAL   J Mol Biol 303 (4), 627-641 (2000)
   PUBMED   11054297
REFERENCE   2  (residues 1 to 63)
  AUTHORS   Fani,R., Tamburini,E., Mori,E., Lazcano,A., Lio,P., Barberio,C.,
            Casalone,E., Cavalieri,D., Perito,B. and Polsinelli,M.
  TITLE     Paralogous histidine biosynthetic genes: evolutionary analysis of
            the Saccharomyces cerevisiae HIS6 and HIS7 genes
  JOURNAL   Gene 197 (1-2), 9-17 (1997)
   PUBMED   9332345
REFERENCE   3  (residues 1 to 63)
  AUTHORS   Fani,R., Lio,P., Chiarelli,I. and Bazzicalupo,M.
  TITLE     The evolution of the histidine biosynthetic genes in prokaryotes: a
            common ancestor for the hisA and hisF genes
  JOURNAL   J Mol Evol 38 (5), 489-495 (1994)
   PUBMED   8028028
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013168.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00977.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..63
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..63
                     /product="HisA/HisF-related TIM barrel protein"
                     /GO_process="GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
     Region          <1..61
                     /region_name="TIM-like beta/alpha barrel domains"
                     /note="A large family of domains similar to triose
                     phosphate isomerase (TIM) which, in general, share an
                     eight beta/alpha closed barrel structure; cl21457"
                     /db_xref="CDD:473867"
     Site            order(13..14,36..37)
                     /site_type="other"
                     /note="phosphate binding site [ion binding]"
                     /db_xref="CDD:240082"
ORIGIN      
        1 vravchvpll asggagtmeh fleafrdadv agalaasvfh kqiinigelk aylaaqgvei
       61 rvc
//
LOCUS       WP_258034689             221 aa            linear   BCT 02-MAR-2025
DEFINITION  Gp138 family membrane-puncturing spike protein [Pectobacterium
            odoriferum].
ACCESSION   WP_258034689
VERSION     WP_258034689.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium odoriferum
  ORGANISM  Pectobacterium odoriferum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 221)
  AUTHORS   Browning,C., Shneider,M.M., Bowman,V.D., Schwarzer,D. and
            Leiman,P.G.
  TITLE     Phage pierces the host cell membrane with the iron-loaded spike
  JOURNAL   Structure 20 (2), 326-339 (2012)
   PUBMED   22325780
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037331.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18352.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Pectobacterium odoriferum"
                     /db_xref="taxon:78398"
     Protein         1..221
                     /product="Gp138 family membrane-puncturing spike protein"
                     /calculated_mol_wt=23438
     Region          30..126
                     /region_name="Gp138_N"
                     /note="Phage protein Gp138 N-terminal domain; pfam18352"
                     /db_xref="CDD:465722"
ORIGIN      
        1 mamsnsqanp lyrameavkt sairdvmtti pghvmaynpt tqraqvqcgi qrklagryvd
       61 vpiiinvpvr fsgtaewavf helpagtegl vhfakqsida widqggvvap aderqfsadd
      121 affssgyrsl ktaipnlpts gvgmsnrdgs vrihltddgi tlicgdvslt vspegithsg
      181 kttldgrtkv tagglsvgei efsdhvhdgv etgtgstqrp r
//
LOCUS       WP_258034694              82 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase, partial [Pectobacterium odoriferum].
ACCESSION   WP_258034694
VERSION     WP_258034694.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium odoriferum
  ORGANISM  Pectobacterium odoriferum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 82)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 82)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012234.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00004.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Pectobacterium odoriferum"
                     /db_xref="taxon:78398"
     Protein         <1..>82
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
     Region          <1..>82
                     /region_name="VI_ClpV1"
                     /note="type VI secretion ATPase, ClpV1 family; TIGR03345"
                     /db_xref="CDD:274528"
ORIGIN      
        1 ldlgllqaga gvkgefeqrl knvidavqqs pvpvllfide ahtiigagnq sggadaanll
       61 kpalargelr tiaattwsey kq
//
LOCUS       WP_258034695             164 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Pectobacterium odoriferum].
ACCESSION   WP_258034695
VERSION     WP_258034695.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium odoriferum
  ORGANISM  Pectobacterium odoriferum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 164)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 164)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Pectobacterium odoriferum"
                     /db_xref="taxon:78398"
     Protein         1..>164
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          1..>164
                     /region_name="VgrG"
                     /note="Uncharacterized conserved protein VgrG, implicated
                     in type VI secretion and phage assembly [Intracellular
                     trafficking, secretion, and vesicular transport, Mobilome:
                     prophages, transposons, General function prediction only];
                     COG3501"
                     /db_xref="CDD:442724"
ORIGIN      
        1 mstslpirfs hnhhrlsvkg caaeldvlaf egdealstpf syrieftssd haiskemmlm
       61 kaasltllap edlgygikmq qavrtlqgvv sgferlntsk dethyaltlq prlallnrsh
      121 qnaiyqdmsv pqivekilre rhnmrgqdfl fslekeyprr eqvm
//
LOCUS       WP_258034728             289 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Klebsiella
            pneumoniae].
ACCESSION   WP_258034728
VERSION     WP_258034728.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 289)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..289
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=32963
     Region          1..287
                     /region_name="PRK10086"
                     /note="DNA-binding transcriptional regulator DsdC"
                     /db_xref="CDD:182231"
ORIGIN      
        1 mqtfevtarh lsftlaahem nltqgavshr irrlemhigf rlfirmtrkl alteegkrll
       61 atlshslrai ndeiedirdq dlrgtlligi aptlahlwlm prlprfqtqw pglnlqfrvr
      121 agvmdfneer vdlaiyygat rypdlyqqrl maesllpgcs pryrqqyrpl sggdpaalvw
      181 ihacestdvq dqfaewrlwc qhsgqalpfd gryyavnnhs laiemalngl gvvmgrktli
      241 qplldagrlv alseneapsp fgydlicpqe nrsrprfraf sewlaaeca
//
LOCUS       WP_258034733             144 aa            linear   BCT 02-MAR-2025
DEFINITION  transcription termination/antitermination NusG family protein
            [Klebsiella pneumoniae].
ACCESSION   WP_258034733
VERSION     WP_258034733.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014417.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02357.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..144
                     /product="transcription termination/antitermination NusG
                     family protein"
                     /GO_process="GO:0006354 - DNA-templated transcription
                     elongation [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /GO_process="GO:0140673 - transcription elongation-coupled
                     chromatin remodeling [Evidence IEA]"
                     /calculated_mol_wt=17003
     Region          1..100
                     /region_name="NGN_SP_AnfA1"
                     /note="N-Utilization Substance G (NusG) N-terminal domain
                     in the NusG Specialized Paralog (SP), AnFA1; cd09894"
                     /db_xref="CDD:193583"
ORIGIN      
        1 mewyvlqftt trfaavfahl erlnfsyfcp meteryrrpd kiisyrerrl plftgylfiq
       61 adfeevhstt itaipyvqrf isfggeplpv pedvmaelly rqshttaqan llrksiphdf
      121 aeillmdnpq qrsmafihyi ters
//
LOCUS       WP_258034770             284 aa            linear   BCT 02-MAR-2025
DEFINITION  FecR domain-containing protein, partial [Pectobacterium
            odoriferum].
ACCESSION   WP_258034770
VERSION     WP_258034770.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium odoriferum
  ORGANISM  Pectobacterium odoriferum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 284)
  AUTHORS   Van Hove,B., Staudenmaier,H. and Braun,V.
  TITLE     Novel two-component transmembrane transcription control: regulation
            of iron dicitrate transport in Escherichia coli K-12
  JOURNAL   J Bacteriol 172 (12), 6749-6758 (1990)
   PUBMED   2254251
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04773.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Pectobacterium odoriferum"
                     /db_xref="taxon:78398"
     Protein         <1..284
                     /product="FecR domain-containing protein"
     Region          1..281
                     /region_name="PRK09774"
                     /note="fec operon regulator FecR; Reviewed"
                     /db_xref="CDD:236622"
ORIGIN      
        1 wreaspdneq awqhiesvca nlgqlnaraa hqslstlngm qrrsvlkala ilcltggagv
       61 agsrtdlwqs ltadyqtqvg eqrhavlddg ttlllntqta lnvaygddlr qltlirgevm
      121 ietgqaekaa lyprpfivtt aqgkvqalgt rfslrvqdeh tqvavydgav rlhphqnsqd
      181 gqvvksgqta tfttqrcgqi etakaepawv kgqlladnqr lvdfvdelsr yrsgvircqp
      241 eveslrfsgv fplsdtdnil aalvealpvq vryfsrywvq iaar
//
LOCUS       WP_258034789             480 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Pectobacterium odoriferum].
ACCESSION   WP_258034789
VERSION     WP_258034789.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium odoriferum
  ORGANISM  Pectobacterium odoriferum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 480)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 480)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 480)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 480)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Pectobacterium odoriferum"
                     /db_xref="taxon:78398"
     Protein         1..>480
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          8..>476
                     /region_name="ABC2_perm_RbbA"
                     /note="ribosome-associated ATPase/putative transporter
                     RbbA; NF033858"
                     /db_xref="CDD:468210"
ORIGIN      
        1 mtnaftqitl dglekrfagq ekpalaslta eirsgavtgl vgpdgagktt llrmlagllt
       61 pshgtlrvan ldpikedrql hailgympqr fglyedltvm enltlyadlr gitgdvrket
      121 fdrllsftdl trftnrlagk lsggmkqklg lactllgqpk vllldepgvg vdpisrrelw
      181 hmvheladdg mlilwstsyl deaeqcrdvl llnegellyr gaprdltarm agrcilmdtg
      241 drrhrdvlqe alrlpqvsdg viqgqyvrli lkpdadrasl lsalhleags lhdtdprfed
      301 afidllgggp asdsslasim pqidvsrset vieaqtltkk fgdfaatdhv sfqvkrgeif
      361 gllgpngagk sttfkmmcgl lvptdgkalv ldmdlktssg karqhlgyma qkfslygnlt
      421 veqnlrffsg vyglkgkaqr dkmagmtdaf nfqpiyrqtp dalplgfkqr lalacalmpr
//
LOCUS       WP_258034812             365 aa            linear   BCT 02-MAR-2025
DEFINITION  GAF domain-containing sensor histidine kinase [Bacillus
            toyonensis].
ACCESSION   WP_258034812
VERSION     WP_258034812.1
KEYWORDS    RefSeq.
SOURCE      Bacillus toyonensis
  ORGANISM  Bacillus toyonensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 365)
  AUTHORS   Ortet,P., Whitworth,D.E., Santaella,C., Achouak,W. and Barakat,M.
  TITLE     P2CS: updates of the prokaryotic two-component systems database
  JOURNAL   Nucleic Acids Res 43 (Database issue), D536-D541 (2015)
   PUBMED   25324303
REFERENCE   2  (residues 1 to 365)
  AUTHORS   Heikaus,C.C., Pandit,J. and Klevit,R.E.
  TITLE     Cyclic nucleotide binding GAF domains from phosphodiesterases:
            structural and mechanistic insights
  JOURNAL   Structure 17 (12), 1551-1557 (2009)
   PUBMED   20004158
REFERENCE   3  (residues 1 to 365)
  AUTHORS   Ho,Y.S., Burden,L.M. and Hurley,J.H.
  TITLE     Structure of the GAF domain, a ubiquitous signaling motif and a new
            class of cyclic GMP receptor
  JOURNAL   EMBO J 19 (20), 5288-5299 (2000)
   PUBMED   11032796
  REMARK    Erratum:[EMBO J 2001 Mar 15;20(6):1483]
REFERENCE   4  (residues 1 to 365)
  AUTHORS   Dutta,R. and Inouye,M.
  TITLE     GHKL, an emergent ATPase/kinase superfamily
  JOURNAL   Trends Biochem Sci 25 (1), 24-28 (2000)
   PUBMED   10637609
REFERENCE   5  (residues 1 to 365)
  AUTHORS   Stock,A.M., Robinson,V.L. and Goudreau,P.N.
  TITLE     Two-component signal transduction
  JOURNAL   Annu Rev Biochem 69, 183-215 (2000)
   PUBMED   10966457
REFERENCE   6  (residues 1 to 365)
  AUTHORS   Stock,J.
  TITLE     Signal transduction: Gyrating protein kinases
  JOURNAL   Curr Biol 9 (10), R364-R367 (1999)
   PUBMED   10339418
REFERENCE   7  (residues 1 to 365)
  AUTHORS   Aravind,L. and Ponting,C.P.
  TITLE     The GAF domain: an evolutionary link between diverse
            phototransducing proteins
  JOURNAL   Trends Biochem Sci 22 (12), 458-459 (1997)
   PUBMED   9433123
REFERENCE   8  (residues 1 to 365)
  AUTHORS   Alex,L.A. and Simon,M.I.
  TITLE     Protein histidine kinases and signal transduction in prokaryotes
            and eukaryotes
  JOURNAL   Trends Genet 10 (4), 133-138 (1994)
   PUBMED   8029829
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11453261
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Bacillus toyonensis"
                     /db_xref="taxon:155322"
     Protein         1..365
                     /product="GAF domain-containing sensor histidine kinase"
                     /EC_number="2.7.13.3"
                     /GO_function="GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=41761
     Region          <1..>287
                     /region_name="GAF"
                     /note="GAF domain [Signal transduction mechanisms];
                     COG2203"
                     /db_xref="CDD:441805"
     Region          146..365
                     /region_name="ComP"
                     /note="Signal transduction histidine kinase ComP [Signal
                     transduction mechanisms]; COG4585"
                     /db_xref="CDD:443642"
ORIGIN      
        1 mhrlealkei aellneatnl qdmlekvlht llqvmnlqtg wiffidesgk hrmlvdenlp
       61 paltwqekkp mcegdcwcve rfvngrleka tniieckrie daiecnwget edvthhatip
      121 lrsgsekfgl lnvaaphkth fseeelalle aiafqigtti qriqlveker kyvvvaernr
      181 lardlhdsvk qllfsimlta kgtlnmtqdr glqemlsyig elsqealqem tlliwqlrpe
      241 glekglaeai qnygkllgiq vevridgmvs igdeieevlw risqealhnc kkhascekvn
      301 vrlrmennql hfhvedngkg fiqdqvsesa fglksmkeri elmkgnfrik telekgtkie
      361 iqlpv
//
LOCUS       WP_258034681              24 aa            linear   BCT 02-MAR-2025
DEFINITION  LCI fold-containing protein [Bacillus thuringiensis].
ACCESSION   WP_258034681
VERSION     WP_258034681.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 24)
  AUTHORS   Faheem,M., Martins-de-Sa,D., Vidal,J.F., Alvares,A.C.,
            Brandao-Neto,J., Bird,L.E., Tully,M.D., von Delft,F., Souto,B.M.,
            Quirino,B.F., Freitas,S.M. and Barbosa,J.A.
  TITLE     Functional and structural characterization of a novel putative
            cysteine protease cell wall-modifying multi-domain enzyme selected
            from a microbial metagenome
  JOURNAL   Sci Rep 6, 38031 (2016)
   PUBMED   27934875
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023618.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12197.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..24
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         1..24
                     /product="LCI fold-containing protein"
                     /calculated_mol_wt=2981
ORIGIN      
        1 mtwylkkvyq epnktwtgyf edkr
//
LOCUS       WP_258034827             356 aa            linear   BCT 02-MAR-2025
DEFINITION  TnsA endonuclease N-terminal domain-containing protein
            [Pectobacterium odoriferum].
ACCESSION   WP_258034827
VERSION     WP_258034827.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium odoriferum
  ORGANISM  Pectobacterium odoriferum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 356)
  AUTHORS   M Iyer,L., Anantharaman,V., Krishnan,A., Burroughs,A.M. and
            Aravind,L.
  TITLE     Jumbo Phages: A Comparative Genomic Overview of Core Functions and
            Adaptions for Biological Conflicts
  JOURNAL   Viruses 13 (1), 63 (2021)
   PUBMED   33466489
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 356)
  AUTHORS   Benler,S., Hung,S.H., Vander Griend,J.A., Peters,G.A., Rohwer,F.
            and Segall,A.M.
  TITLE     Gp4 is a nuclease required for morphogenesis of T4-like
            bacteriophages
  JOURNAL   Virology 543, 7-12 (2020)
   PUBMED   32056848
REFERENCE   3  (residues 1 to 356)
  AUTHORS   Steczkiewicz,K., Muszewska,A., Knizewski,L., Rychlewski,L. and
            Ginalski,K.
  TITLE     Sequence, structure and functional diversity of PD-(D/E)XK
            phosphodiesterase superfamily
  JOURNAL   Nucleic Acids Res 40 (15), 7016-7045 (2012)
   PUBMED   22638584
REFERENCE   4  (residues 1 to 356)
  AUTHORS   Hickman,A.B., Li,Y., Mathew,S.V., May,E.W., Craig,N.L. and Dyda,F.
  TITLE     Unexpected structural diversity in DNA recombination: the
            restriction endonuclease connection
  JOURNAL   Mol Cell 5 (6), 1025-1034 (2000)
   PUBMED   10911996
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020305.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08722.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Pectobacterium odoriferum"
                     /db_xref="taxon:78398"
     Protein         1..356
                     /product="TnsA endonuclease N-terminal domain-containing
                     protein"
                     /calculated_mol_wt=40292
     Region          <1..42
                     /region_name="RpoD"
                     /note="DNA-directed RNA polymerase, sigma subunit
                     (sigma70/sigma32) [Transcription]; COG0568"
                     /db_xref="CDD:440334"
     Region          201..276
                     /region_name="Tn7_TnsA-like_N"
                     /note="TnsA-like endonuclease N terminal; pfam08722"
                     /db_xref="CDD:462579"
ORIGIN      
        1 mrlgtdehph tlaeiaakcg vsrervrqlq erafkrlagk sryegspgaa lkklinavsn
       61 ssyeiaiwvh rivhrdfmts sglaakfilc tagiqkvkre eivgffsdis llqkaklakl
      121 reldrsraak erveselsgw lnhtdwptvi appppaaqls sqrivndsdi aghfysqkla
      181 rtvqyesgle lnimtqlers dqvsfyqeqp vaipysfkdk lrkyypdllv atvdgrcllv
      241 evkptdsmal svnrakanag rawahargwg wlvvsdrhtl qqleehvipa vkwtmienel
      301 nasevmtwrd mmglrtryel trfdltayii qsgaevdrsy ritarnyyns glpivd
//
LOCUS       WP_258034840             260 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Pectobacterium odoriferum].
ACCESSION   WP_258034840
VERSION     WP_258034840.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium odoriferum
  ORGANISM  Pectobacterium odoriferum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 260)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 260)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 260)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 260)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Pectobacterium odoriferum"
                     /db_xref="taxon:78398"
     Protein         1..>260
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          1..>260
                     /region_name="YejF"
                     /note="ABC-type microcin C transport system, duplicated
                     ATPase component YejF [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG4172"
                     /db_xref="CDD:443332"
ORIGIN      
        1 mtapimsvsh lttafqvnge wmnvvrdlsf tigeretvav vgesgsgksv maksimrllp
       61 pgqsrvegqi hfgdtellsl pnkamqdvrg nrigmifqep mtslnpvlpi gyqitevlrr
      121 hrgmgkaear aeavrllekv ripaaksrln eypqsfsggm rqrvviaial achpklliad
      181 epttaldvti qaqiltlikt lqeeegmsvl fithdmgvva evsdrtlvmy qgemvenavt
      241 reifhhpqqp ytrmllsavp
//
LOCUS       WP_258034843             245 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Pectobacterium odoriferum].
ACCESSION   WP_258034843
VERSION     WP_258034843.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium odoriferum
  ORGANISM  Pectobacterium odoriferum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Pectobacterium odoriferum"
                     /db_xref="taxon:78398"
     Protein         <1..245
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <1..234
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 aasvlgvpfg aligdlagwr wafgcmavfs glvlvlhlav ipalpvthsv tlhqfgeqli
       61 nrklqvglil tlllvaghfm aftfvqplll svsgfdarwi gallfaygla giignflagt
      121 iaarrtaltl maialglllt pilfltvggs hfggsiallv wglayggvsv glmtwmmkaa
      181 pravemasal yigvfnvgia lgswvggqiv dssglittlw laggfavval llsfsmklae
      241 srkiv
//
LOCUS       WP_258034857             118 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase, partial [Pectobacterium odoriferum].
ACCESSION   WP_258034857
VERSION     WP_258034857.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium odoriferum
  ORGANISM  Pectobacterium odoriferum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 118)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 118)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019344.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07724.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Pectobacterium odoriferum"
                     /db_xref="taxon:78398"
     Protein         <1..>118
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
     Region          <1..118
                     /region_name="VI_ClpV1"
                     /note="type VI secretion ATPase, ClpV1 family; TIGR03345"
                     /db_xref="CDD:274528"
ORIGIN      
        1 vfllvgpsgv gktetalala dvlyggeksl itinlseyqe phtvsqlkgs ppgyvgygqg
       61 gilteavrkr pysvvlldev ekahrdvmnl fyqvfdrgfm rdgegreidf rntvilmt
//
LOCUS       WP_258034966              70 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Bacillus toyonensis].
ACCESSION   WP_258034966
VERSION     WP_258034966.1
KEYWORDS    RefSeq.
SOURCE      Bacillus toyonensis
  ORGANISM  Bacillus toyonensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Bacillus toyonensis"
                     /db_xref="taxon:155322"
     Protein         1..70
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=7903
     Region          <13..70
                     /region_name="PRK08063"
                     /note="enoyl-[acyl-carrier-protein] reductase FabL"
                     /db_xref="CDD:236145"
ORIGIN      
        1 mnrvpssyii ndnnesylks fegnkllkki pyrrfvgisd vtnvilflms dksdairgkn
       61 ivvdygytiv
//
LOCUS       WP_258034965             129 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase-fold protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_258034965
VERSION     WP_258034965.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 129)
  AUTHORS   Goins,C.M., Dajnowicz,S., Smith,M.D., Parks,J.M. and Ronning,D.R.
  TITLE     Mycolyltransferase from Mycobacterium tuberculosis in covalent
            complex with tetrahydrolipstatin provides insights into antigen 85
            catalysis
  JOURNAL   J Biol Chem 293 (10), 3651-3662 (2018)
   PUBMED   29352107
REFERENCE   2  (residues 1 to 129)
  AUTHORS   van Straaten,K.E., Gonzalez,C.F., Valladares,R.B., Xu,X.,
            Savchenko,A.V. and Sanders,D.A.
  TITLE     The structure of a putative S-formylglutathione hydrolase from
            Agrobacterium tumefaciens
  JOURNAL   Protein Sci 18 (10), 2196-2202 (2009)
   PUBMED   19653299
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012958.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00756.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>129
                     /product="alpha/beta hydrolase-fold protein"
     Region          <1..>129
                     /region_name="PRK10439"
                     /note="enterobactin/ferric enterobactin esterase;
                     Provisional"
                     /db_xref="CDD:236695"
ORIGIN      
        1 gwdplnaahp aarclewrsa rlgnhrrvwi yttgeavapq prplailldg qfwaesmpvw
       61 splaaltreg rlppavylli daidnqrrgg elpchrdfwl avqeellplv hgyapfsdrp
      121 drtvvagqs
//
LOCUS       WP_258034740             181 aa            linear   BCT 02-MAR-2025
DEFINITION  primase-like DNA-binding domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_258034740
VERSION     WP_258034740.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 181)
  AUTHORS   Evans,E., Klemperer,N., Ghosh,R. and Traktman,P.
  TITLE     The vaccinia virus D5 protein, which is required for DNA
            replication, is a nucleic acid-independent nucleoside
            triphosphatase
  JOURNAL   J Virol 69 (9), 5353-5361 (1995)
   PUBMED   7636979
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015259.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03288.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..181
                     /product="primase-like DNA-binding domain-containing
                     protein"
     Region          <1..169
                     /region_name="COG3378"
                     /note="DNA primase, phage- or plasmid-associated
                     [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442605"
ORIGIN      
        1 rftdrsggvs rrrviihfpe qiapeerdpq lrdkiarela vivrqlmqqf sdpmsarsll
       61 qsqqnsdeal sikrdadptf dfcgylealp epdgmymgna niiprqprly lyhaylvyme
      121 ahgyrnalsl tmfgkglsam lkeyglnyek rrtnqgmqtn lalreesnad wlpkcdepta
      181 s
//
LOCUS       WP_258034984              66 aa            linear   BCT 02-MAR-2025
DEFINITION  CSS-motif domain-containing protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_258034984
VERSION     WP_258034984.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 66)
  AUTHORS   Herbst,S., Lorkowski,M., Sarenko,O., Nguyen,T.K.L., Jaenicke,T. and
            Hengge,R.
  TITLE     Transmembrane redox control and proteolysis of PdeC, a novel type
            of c-di-GMP phosphodiesterase
  JOURNAL   EMBO J 37 (8) (2018)
   PUBMED   29514851
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024202.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12792.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>66
                     /product="CSS-motif domain-containing protein"
     Region          1..>66
                     /region_name="CSS-motif"
                     /note="CSS motif domain associated with EAL; pfam12792"
                     /db_xref="CDD:463709"
ORIGIN      
        1 mlvrsesllv qtesvktaak shlnigdspc tnenilhlrv vvwpyplikd vgyiikgela
       61 csalwg
//
LOCUS       WP_258034914             178 aa            linear   BCT 02-MAR-2025
DEFINITION  ACT domain-containing protein, partial [Pectobacterium odoriferum].
ACCESSION   WP_258034914
VERSION     WP_258034914.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium odoriferum
  ORGANISM  Pectobacterium odoriferum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 178)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Gleaning non-trivial structural, functional and evolutionary
            information about proteins by iterative database searches
  JOURNAL   J Mol Biol 287 (5), 1023-1040 (1999)
   PUBMED   10222208
REFERENCE   2  (residues 1 to 178)
  AUTHORS   Schuller,D.J., Grant,G.A. and Banaszak,L.J.
  TITLE     The allosteric ligand site in the Vmax-type cooperative enzyme
            phosphoglycerate dehydrogenase
  JOURNAL   Nat Struct Biol 2 (1), 69-76 (1995)
   PUBMED   7719856
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013962.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01842.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Pectobacterium odoriferum"
                     /db_xref="taxon:78398"
     Protein         1..>178
                     /product="ACT domain-containing protein"
     Region          1..>178
                     /region_name="PRK10820"
                     /note="transcriptional regulator TyrR"
                     /db_xref="CDD:236769"
ORIGIN      
        1 mhlevicedr igmvrelldl lasrnidlrg ieiasigriy lnfatldfdd frllmteirr
       61 iesvsdvrtv afmpserehr alnallesmp epvfsldmkg klelfnpaal alfeqsaeti
      121 seltigslip sfnfaswlek ssavvaervv irgqdfllem tpvrleddag kvatagal
//
LOCUS       WP_258035087             371 aa            linear   BCT 02-MAR-2025
DEFINITION  FKBP-type peptidyl-prolyl cis-trans isomerase, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_258035087
VERSION     WP_258035087.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012478.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00254.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..371
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /EC_number="5.2.1.8"
                     /GO_function="GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
     Region          42..>219
                     /region_name="PRK09039"
                     /note="peptidoglycan -binding protein"
                     /db_xref="CDD:181619"
     Region          151..370
                     /region_name="PRK10902"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     Provisional"
                     /db_xref="CDD:236791"
ORIGIN      
        1 qsltirlaaa ekaqqaaleq ekalnadkqp latrlaaaek ekqavleqvk aliadkqslt
       61 irlaaaektq qaaldqvkal nadkqslstr laavdkaphg pandaaapkn eppemaaiva
      121 ayrlqadkdn aqlrmkedei ellrtqlsvq sktrsgesaa aklsasgeqq ayaigasmgs
      181 ealnvlttrr tqgvtvdagl vlqgiedafr gqlrlgeqer nkalfdvsqq vfqnlnkieq
      241 knisagkkyq qafarkkdvv fkegvysrvd ylgkgkisgn dlvtvvikem ltdgtvindm
      301 eakdqaltqk ldayppvfre plkrlqnhgs vtlvvppeka ygskglppki ppgatmvysv
      361 rivdsqpepa k
//
LOCUS       WP_258035094              95 aa            linear   BCT 02-MAR-2025
DEFINITION  colicin E3/pyocin S6 family cytotoxin, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_258035094
VERSION     WP_258035094.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 95)
  AUTHORS   Carr,S., Walker,D., James,R., Kleanthous,C. and Hemmings,A.M.
  TITLE     Inhibition of a ribosome-inactivating ribonuclease: the crystal
            structure of the cytotoxic domain of colicin E3 in complex with its
            immunity protein
  JOURNAL   Structure 8 (9), 949-960 (2000)
   PUBMED   10986462
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020569.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09000.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>95
                     /product="colicin E3/pyocin S6 family cytotoxin"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /GO_function="GO:0043022 - ribosome binding [Evidence
                     IEA]"
     Region          30..>95
                     /region_name="Cytotoxic"
                     /note="pfam09000"
                     /db_xref="CDD:401084"
ORIGIN      
        1 ikakdaenkl neekkkprkg tkyyghdyfp dpktedikgl gelkegkpkt pkqggggkra
       61 rwfgvkkrki iecdsqlgel egyrasdgel lgafd
//
LOCUS       WP_258035117             168 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein, partial [Bacillus
            thuringiensis].
ACCESSION   WP_258035117
VERSION     WP_258035117.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 168)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         1..>168
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <83..132
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
ORIGIN      
        1 mykekfaeif seysssfapt triketylef lndgslelig ecnewcreev vntfrdllem
       61 gifrhndtis fsnwyikkye yriknafgkr flwafidetq dtseiqydll mrifnnglti
      121 lqkfgdpyqa lytmfgkged awvpsretip qlelsystrf gesiakvl
//
LOCUS       WP_258035003             306 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis].
ACCESSION   WP_258035003
VERSION     WP_258035003.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 306)
  AUTHORS   Cheng,X., Zhang,X., Pflugrath,J.W. and Studier,F.W.
  TITLE     The structure of bacteriophage T7 lysozyme, a zinc amidase and an
            inhibitor of T7 RNA polymerase
  JOURNAL   Proc Natl Acad Sci U S A 91 (9), 4034-4038 (1994)
   PUBMED   8171031
REFERENCE   2  (residues 1 to 306)
  AUTHORS   Wang,X., Wilkinson,B.J. and Jayaswal,R.K.
  TITLE     Sequence analysis of a Staphylococcus aureus gene encoding a
            peptidoglycan hydrolase activity
  JOURNAL   Gene 102 (1), 105-109 (1991)
   PUBMED   1677905
REFERENCE   3  (residues 1 to 306)
  AUTHORS   Potvin,C., Leclerc,D., Tremblay,G., Asselin,A. and Bellemare,G.
  TITLE     Cloning, sequencing and expression of a Bacillus bacteriolytic
            enzyme in Escherichia coli
  JOURNAL   Mol Gen Genet 214 (2), 241-248 (1988)
   PUBMED   3070348
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013661.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01510.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         1..306
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /EC_number="3.5.1.28"
                     /GO_function="GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=33757
     Region          2..166
                     /region_name="CwlA"
                     /note="N-acetylmuramoyl-L-alanine amidase CwlA [Cell
                     wall/membrane/envelope biogenesis]; COG5632"
                     /db_xref="CDD:444359"
     Region          177..297
                     /region_name="YgiM"
                     /note="Uncharacterized conserved protein YgiM, contains
                     N-terminal SH3 domain, DUF1202 family [General function
                     prediction only]; COG3103"
                     /db_xref="CDD:442337"
ORIGIN      
        1 mrkklvdpsk ygtkcpytmn pefitvhnty ndakaenevs ymirndnqvs fhiavddkea
       61 vqgiplerna whcgdgggng nrksigveic yslsggdryy kaednaaivv aqlmkqynip
      121 iskvrthqsw sgkycphrml aegrwnsfve rvqnaynggg kvtptpippa nngtgiayie
      181 gnginlrkgp gtgygvirql gkgesyqvwg esngwlnlgg dqwiyndpsy irytggnapt
      241 qstndgvgvv titadvlrvr tgpgtnygvv knvyqgekyq twgnrdgwyn vggdqwvsge
      301 yvkfek
//
LOCUS       WP_258035126             243 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding protein [Pseudomonas putida].
ACCESSION   WP_258035126
VERSION     WP_258035126.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas putida
  ORGANISM  Pseudomonas putida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 243)
  AUTHORS   Mittl,P.R. and Schulz,G.E.
  TITLE     Structure of glutathione reductase from Escherichia coli at 1.86 A
            resolution: comparison with the enzyme from human erythrocytes
  JOURNAL   Protein Sci 3 (5), 799-809 (1994)
   PUBMED   8061609
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013086.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00890.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Pseudomonas putida"
                     /db_xref="taxon:303"
     Protein         1..243
                     /product="FAD-binding protein"
                     /calculated_mol_wt=25786
     Region          <1..239
                     /region_name="PRK12842"
                     /note="putative succinate dehydrogenase; Reviewed"
                     /db_xref="CDD:237224"
ORIGIN      
        1 mpcsirtakd gyqaiwphil ldrakpglia vnaqgkrfvn esnsyhdfvm gmlndgsata
       61 hlicdqnflq ryglglvmpl rsainiarfv kagylikgst lgelasklkv daeglantvr
      121 tynaaaangd dpafnrgtsp mnrhngdpqq lpnpcvrplg dgpyyavtvq padlacsagl
      181 sgnadgqvln mqgqvidgly acgndlvsif rgtypgpgtt lgpaivfgwr varhaarvad
      241 rqc
//
LOCUS       WP_258034994              38 aa            linear   BCT 02-MAR-2025
DEFINITION  VirB3 family type IV secretion system protein [Klebsiella
            pneumoniae].
ACCESSION   WP_258034994
VERSION     WP_258034994.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 38)
  AUTHORS   Liang,Y., Aoyama,T. and Oka,A.
  TITLE     Structural characterization of the virB operon on the
            hairy-root-inducing plasmid A4
  JOURNAL   DNA Res 5 (2), 87-93 (1998)
   PUBMED   9679196
REFERENCE   2  (residues 1 to 38)
  AUTHORS   Alt-Morbe,J., Stryker,J.L., Fuqua,C., Li,P.L., Farrand,S.K. and
            Winans,S.C.
  TITLE     The conjugal transfer system of Agrobacterium tumefaciens
            octopine-type Ti plasmids is closely related to the transfer system
            of an IncP plasmid and distantly related to Ti plasmid vir genes
  JOURNAL   J Bacteriol 178 (14), 4248-4257 (1996)
   PUBMED   8763954
REFERENCE   3  (residues 1 to 38)
  AUTHORS   Shirasu,K. and Kado,C.I.
  TITLE     Membrane location of the Ti plasmid VirB proteins involved in the
            biosynthesis of a pilin-like conjugative structure on Agrobacterium
            tumefaciens
  JOURNAL   FEMS Microbiol Lett 111 (2-3), 287-294 (1993)
   PUBMED   8405938
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016957.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05101.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..38
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..38
                     /product="VirB3 family type IV secretion system protein"
                     /calculated_mol_wt=4498
ORIGIN      
        1 miihmwailv fvflwipsaa ltkyddrmfr imglwlkt
//
LOCUS       WP_258035141             198 aa            linear   BCT 02-MAR-2025
DEFINITION  lyase family protein, partial [Bacillus thuringiensis].
ACCESSION   WP_258035141
VERSION     WP_258035141.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00206.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         1..>198
                     /product="lyase family protein"
     Region          1..>198
                     /region_name="PRK14515"
                     /note="aspartate ammonia-lyase; Provisional"
                     /db_xref="CDD:237743"
ORIGIN      
        1 matltevkng vriekdflge kevpnyayyg vqtmravenf pitgykiheg likafaivkk
       61 aaalantdvg rlelnkggai aeaaqeildg kwhdhfivdp iqggagtsmn mnanevmanr
      121 alellgmekg dyhyispnsh vnmaqstnda fptaihiatl nalegllqtm gymhdifelk
      181 aeqfdhvikm grthlqda
//
LOCUS       WP_258035128              61 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Bacillus thuringiensis].
ACCESSION   WP_258035128
VERSION     WP_258035128.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 61)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 61)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 61)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 61)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..61
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         <1..61
                     /product="ATP-binding protein"
     Region          <1..61
                     /region_name="KinE"
                     /note="Sporulation sensor histidine kinase E [Cell cycle
                     control, cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG5809"
                     /db_xref="CDD:444511"
ORIGIN      
        1 gcgipkdkip klneafyttk etgtglglvv tekiikdhng kmsfesevgv gttvevmlpl
       61 h
//
LOCUS       WP_258035146             258 aa            linear   BCT 02-MAR-2025
DEFINITION  aconitase family protein, partial [Bacillus thuringiensis].
ACCESSION   WP_258035146
VERSION     WP_258035146.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012550.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00330.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         1..>258
                     /product="aconitase family protein"
     Region          1..>258
                     /region_name="PRK09277"
                     /note="aconitate hydratase AcnA"
                     /db_xref="CDD:236445"
ORIGIN      
        1 mvkhnpfqsr atfevdgkty hyydlkalen agvgnvsqlp ysvkvllesv lrqvdgrvit
       61 eehvtnlakw gtkdvqdidv pfkpsrvilq dftgvpavvd laslrkamad mggdpdkinp
      121 eitvdlvidh svqvdragta dalafnmdle fkrneerykf lswaqksfdn yravppatgi
      181 vhqvnleyla pvvhavknae gdlvaypdsl vgtdshttmi ngigvlgwgv ggieaeagml
      241 gqpsyfpvpe vigvkltg
//
LOCUS       WP_258035176              85 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein, partial [Bacillus
            thuringiensis].
ACCESSION   WP_258035176
VERSION     WP_258035176.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         <1..85
                     /product="phosphopantetheine-binding protein"
     Region          <3..84
                     /region_name="AcpA"
                     /note="Acyl carrier protein/domain [Lipid transport and
                     metabolism, Secondary metabolites biosynthesis, transport
                     and catabolism]; COG3433"
                     /db_xref="CDD:442659"
ORIGIN      
        1 vkgdesegit iqevhelvaq llrepiesid fdedllnrgl dsvrimslve kwrregkeit
       61 fadlaehptv agwysllssq taqvl
//
LOCUS       WP_258035184              42 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein, partial [Bacillus
            thuringiensis].
ACCESSION   WP_258035184
VERSION     WP_258035184.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 42)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 42)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 42)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..42
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         <1..42
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
     Region          <1..42
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
ORIGIN      
        1 qvfggygytk dypverffrd akitqiyegt seiqklvisr al
//
LOCUS       WP_258035189             121 aa            linear   BCT 02-MAR-2025
DEFINITION  pyruvate kinase, partial [Bacillus thuringiensis].
ACCESSION   WP_258035189
VERSION     WP_258035189.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 121)
  AUTHORS   Yuan,M., McNae,I.W., Chen,Y., Blackburn,E.A., Wear,M.A.,
            Michels,P.A.M., Fothergill-Gilmore,L.A., Hupp,T. and
            Walkinshaw,M.D.
  TITLE     An allostatic mechanism for M2 pyruvate kinase as an amino-acid
            sensor
  JOURNAL   Biochem J 475 (10), 1821-1837 (2018)
   PUBMED   29748232
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 121)
  AUTHORS   Munoz,M.E. and Ponce,E.
  TITLE     Pyruvate kinase: current status of regulatory and functional
            properties
  JOURNAL   Comp Biochem Physiol B Biochem Mol Biol 135 (2), 197-218 (2003)
   PUBMED   12798932
REFERENCE   3  (residues 1 to 121)
  AUTHORS   Valentini,G., Chiarelli,L.R., Fortin,R., Dolzan,M., Galizzi,A.,
            Abraham,D.J., Wang,C., Bianchi,P., Zanella,A. and Mattevi,A.
  TITLE     Structure and function of human erythrocyte pyruvate kinase.
            Molecular basis of nonspherocytic hemolytic anemia
  JOURNAL   J Biol Chem 277 (26), 23807-23814 (2002)
   PUBMED   11960989
REFERENCE   4  (residues 1 to 121)
  AUTHORS   Larsen,T.M., Benning,M.M., Wesenberg,G.E., Rayment,I. and Reed,G.H.
  TITLE     Ligand-induced domain movement in pyruvate kinase: structure of the
            enzyme from rabbit muscle with Mg2+, K+, and L-phospholactate at
            2.7 A resolution
  JOURNAL   Arch Biochem Biophys 345 (2), 199-206 (1997)
   PUBMED   9308890
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012449.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00224.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         1..>121
                     /product="pyruvate kinase"
                     /GO_function="GO:0000287 - magnesium ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0004743 - pyruvate kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0030955 - potassium ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006096 - glycolytic process [Evidence
                     IEA]"
     Region          1..>121
                     /region_name="Pyruvate_Kinase"
                     /note="Pyruvate kinase (PK): Large allosteric enzyme that
                     regulates glycolysis through binding of the substrate,
                     phosphoenolpyruvate, and one or more allosteric effectors.
                     Like other allosteric enzymes, PK has a high substrate
                     affinity R state and a low...; cl39076"
                     /db_xref="CDD:453956"
ORIGIN      
        1 mtidrictig pasnnketla qlikngmkiv rlnlshgthe shkdiirlvk slddsikflg
       61 dvqgpkirlg evkgeqitlq agdsfilhtq pvtgsnteas vdyegiandv kvdsrilind
      121 g
//
LOCUS       WP_258035190             239 aa            linear   BCT 02-MAR-2025
DEFINITION  TSUP family transporter, partial [Bacillus thuringiensis].
ACCESSION   WP_258035190
VERSION     WP_258035190.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 239)
  AUTHORS   Krejcik,Z., Denger,K., Weinitschke,S., Hollemeyer,K., Paces,V.,
            Cook,A.M. and Smits,T.H.
  TITLE     Sulfoacetate released during the assimilation of taurine-nitrogen
            by Neptuniibacter caesariensis: purification of sulfoacetaldehyde
            dehydrogenase
  JOURNAL   Arch Microbiol 190 (2), 159-168 (2008)
   PUBMED   18506422
REFERENCE   2  (residues 1 to 239)
  AUTHORS   Weinitschke,S., Denger,K., Cook,A.M. and Smits,T.H.M.
  TITLE     The DUF81 protein TauE in Cupriavidus necator H16, a sulfite
            exporter in the metabolism of C2 sulfonates
  JOURNAL   Microbiology (Reading) 153 (Pt 9), 3055-3060 (2007)
   PUBMED   17768248
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014035.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01925.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         <1..239
                     /product="TSUP family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
     Region          1..237
                     /region_name="DsbD"
                     /note="Cytochrome C biogenesis protein transmembrane
                     region; cl21514"
                     /db_xref="CDD:473893"
ORIGIN      
        1 vavlagwidt iaggggmiti pimllvgmsp svaiatnklq gssgtlmatv ffikkkeinl
       61 kemrlsilmt ffgsvlggwl vlqiraeyli milpflliii glyfllspni anedqprkis
      121 mllfaltvap flgfydgffg pgtgsliala fillcgysat ratanakiln ftsnfaally
      181 fiifgqidwt iglimmlgqi igsyigakmv ltkgtslirp ivvivcfvma ikiflqnmn
//
LOCUS       WP_258035227              85 aa            linear   BCT 02-MAR-2025
DEFINITION  lyase family protein, partial [Bacillus thuringiensis].
ACCESSION   WP_258035227
VERSION     WP_258035227.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00206.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         <1..>85
                     /product="lyase family protein"
     Region          <1..>85
                     /region_name="PRK14515"
                     /note="aspartate ammonia-lyase; Provisional"
                     /db_xref="CDD:237743"
ORIGIN      
        1 srvlerdmkr ikqsrqhlye vnmgatavgt glnadpeyie avvkhlatis elplvgaedl
       61 vdatqntday tevsaalkvc mmnms
//
LOCUS       WP_258035228              82 aa            linear   BCT 02-MAR-2025
DEFINITION  GyrI-like domain-containing protein, partial [Bacillus
            thuringiensis].
ACCESSION   WP_258035228
VERSION     WP_258035228.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 82)
  AUTHORS   Anantharaman,V. and Aravind,L.
  TITLE     The SHS2 module is a common structural theme in functionally
            diverse protein groups, like Rpb7p, FtsA, GyrI, and MTH1598/TM1083
            superfamilies
  JOURNAL   Proteins 56 (4), 795-807 (2004)
   PUBMED   15281131
REFERENCE   2  (residues 1 to 82)
  AUTHORS   Romanowski,M.J., Gibney,S.A. and Burley,S.K.
  TITLE     Crystal structure of the Escherichia coli SbmC protein that
            protects cells from the DNA replication inhibitor microcin B17
  JOURNAL   Proteins 47 (3), 403-407 (2002)
   PUBMED   11948793
REFERENCE   3  (residues 1 to 82)
  AUTHORS   Kwon,H.J., Bennik,M.H., Demple,B. and Ellenberger,T.
  TITLE     Crystal structure of the Escherichia coli Rob transcription factor
            in complex with DNA
  JOURNAL   Nat Struct Biol 7 (5), 424-430 (2000)
   PUBMED   10802742
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018184.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06445.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         <1..82
                     /product="GyrI-like domain-containing protein"
     Region          <8..82
                     /region_name="SbmC"
                     /note="DNA gyrase inhibitor GyrI/SbmC [Replication,
                     recombination and repair]; COG3449"
                     /db_xref="CDD:442672"
ORIGIN      
        1 nfdkekyqdv qfkrldggty glyqfygeph klseayqymy aewlpnseyd adydrdnlef
       61 clnnvpedle gklkvdlfva lk
//
LOCUS       WP_258035242              94 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR family transcriptional regulator, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_258035242
VERSION     WP_258035242.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 94)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012354.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00126.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>94
                     /product="LysR family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
     Region          64..>93
                     /region_name="PRK11139"
                     /note="DNA-binding transcriptional activator GcvA;
                     Provisional"
                     /db_xref="CDD:182990"
ORIGIN      
        1 mwrtrrfsef sssyrlkmal kndvnsrlsd ilsltfgepa qgalamrrki pssaallave
       61 aaarhgnfar aaaelalteg aisrqiarle alld
//
LOCUS       WP_417281892             244 aa            linear   BCT 02-MAR-2025
DEFINITION  M23 family metallopeptidase [Catellatospora aurea].
ACCESSION   WP_417281892
VERSION     WP_417281892.1
KEYWORDS    RefSeq.
SOURCE      Catellatospora aurea
  ORGANISM  Catellatospora aurea
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Catellatospora.
REFERENCE   1  (residues 1 to 244)
  AUTHORS   Razew,A., Schwarz,J.N., Mitkowski,P., Sabala,I. and Kaus-Drobek,M.
  TITLE     One fold, many functions-M23 family of peptidoglycan hydrolases
  JOURNAL   Front Microbiol 13, 1036964 (2022)
   PUBMED   36386627
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11432770
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Catellatospora aurea"
                     /db_xref="taxon:1337874"
     Protein         1..244
                     /product="M23 family metallopeptidase"
                     /EC_number="3.4.24.-"
                     /GO_function="GO:0008237 - metallopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=25330
     Region          <118..236
                     /region_name="NlpD"
                     /note="Murein DD-endopeptidase MepM and murein hydrolase
                     activator NlpD, contains LysM domain [Cell
                     wall/membrane/envelope biogenesis]; COG0739"
                     /db_xref="CDD:440502"
ORIGIN      
        1 mvrgglarhs rqalaitala gvsafgliag aanandndst pagdakaitn vatvdalaer
       61 qyiaedasry qrstpvettt tkptttppkk ptvtkpkpat vktapkpaaa prpawlipmk
      121 gaqvtscfgq rwgvlhagid fampagtpir avgagtvvsa gwaysgygis vvvdhhngyl
      181 thyahmsqdk vsvgdevkag dilglegstg dstgphlhfe vhkgmwnqin pdgwladrgi
      241 qtsc
//
LOCUS       WP_258035334              86 aa            linear   BCT 02-MAR-2025
DEFINITION  cbb3-type cytochrome c oxidase subunit I, partial [Campylobacter
            concisus].
ACCESSION   WP_258035334
VERSION     WP_258035334.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter concisus
  ORGANISM  Campylobacter concisus
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 86)
  AUTHORS   Gopalasingam,C.C., Johnson,R.M., Chiduza,G.N., Tosha,T.,
            Yamamoto,M., Shiro,Y., Antonyuk,S.V., Muench,S.P. and Hasnain,S.S.
  TITLE     Dimeric structures of quinol-dependent nitric oxide reductases
            (qNORs) revealed by cryo-electron microscopy
  JOURNAL   Sci Adv 5 (8), eaax1803 (2019)
   PUBMED   31489376
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 86)
  AUTHORS   Tsukihara,T., Aoyama,H., Yamashita,E., Tomizaki,T., Yamaguchi,H.,
            Shinzawa-Itoh,K., Nakashima,R., Yaono,R. and Yoshikawa,S.
  TITLE     The whole structure of the 13-subunit oxidized cytochrome c oxidase
            at 2.8 A
  JOURNAL   Science 272 (5265), 1136-1144 (1996)
   PUBMED   8638158
REFERENCE   3  (residues 1 to 86)
  AUTHORS   Castresana,J., Lubben,M., Saraste,M. and Higgins,D.G.
  TITLE     Evolution of cytochrome oxidase, an enzyme older than atmospheric
            oxygen
  JOURNAL   EMBO J 13 (11), 2516-2525 (1994)
   PUBMED   8013452
REFERENCE   4  (residues 1 to 86)
  AUTHORS   Papa,S., Capitanio,N., Glaser,P. and Villani,G.
  TITLE     The proton pump of heme-copper oxidases
  JOURNAL   Cell Biol Int 18 (5), 345-355 (1994)
   PUBMED   8049679
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012343.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00115.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Campylobacter concisus"
                     /db_xref="taxon:199"
     Protein         <1..86
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /GO_process="GO:0009060 - aerobic respiration [Evidence
                     IEA]"
     Region          <1..77
                     /region_name="NorB"
                     /note="Nitric oxide reductase large subunit [Inorganic ion
                     transport and metabolism]; COG3256"
                     /db_xref="CDD:442487"
ORIGIN      
        1 tchhlyfsgt ttpimafgas fsalevvplv llgaeayehy klqfaqswak tiklsiynfi
       61 avafwnmlga gvfgfliyqk skdtsa
//
LOCUS       WP_258035380             475 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Pseudomonas
            syringae].
ACCESSION   WP_258035380
VERSION     WP_258035380.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 475)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         <1..>475
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..56
                     /region_name="PRK12316"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237054"
     Region          64..475
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation (C) domain of non-ribosomal
                     peptide synthetases(NRPSs) and similar domains including
                     the C-domain of SgcC5, a free-standing NRPS with both
                     ester- and amide- bond forming activity; cd19531"
                     /db_xref="CDD:380454"
ORIGIN      
        1 hffelgghsl lavqlvsrlr qrfevevalr dvfaeptlqg larqvasarl saqtpltlvd
       61 rdlplplswa qqrlwfldql draagaayhi paglrlrgrl dsdalqatld rivarhetlr
      121 thfalhegqa iqviapatqg falithdlra ldsaaqheav eqlageeala pfdlsrgpli
      181 rgrlvqlset ehillvtqhh ivsdgwstgv llheigmlyr afsqgladpl palafqyvdy
      241 aawqrqwlqg etlhtqvefw rqhlsgapal lelptdhrrp plrsyaggrv slalspelta
      301 glrqlgqrhg atlfmtllvg wssllsrfsg qddvvigtpv anrprseles ligffvntla
      361 lrirpeggls vaalleqvka vmlaahahqd lpfeqvveal qpprslghsp ifqvmlalnn
      421 tpgggefslp elsleplqap httaqfdlsl alveadggli gsleyssdlf erati
//
LOCUS       WP_258035386             556 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: alkaline phosphatase D family protein [Ralstonia].
ACCESSION   WP_258035386
VERSION     WP_258035386.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia
  ORGANISM  Ralstonia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020976.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09423.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Ralstonia"
                     /db_xref="taxon:48736"
     Protein         1..556
                     /product="alkaline phosphatase D family protein"
                     /calculated_mol_wt=61029
     Region          16..>54
                     /region_name="Molybdopterin-Binding"
                     /note="Molybdopterin-Binding (MopB) domain of the MopB
                     superfamily of proteins, a large, diverse, heterogeneous
                     superfamily of enzymes that, in general, bind
                     molybdopterin as a cofactor. The MopB domain is found in a
                     wide variety of molybdenum- and...; cl09928"
                     /db_xref="CDD:447860"
ORIGIN      
        1 mtmpsrtppn stphgmsrrd fltlgtaaas lgalglslpe gahaathand aswhagqlah
       61 lipaashdrf likasfqapl arapwlmvng rrvageqtda agrfwrfdvr glqpatqytl
      121 rivdatgkpl adawplrtfp spdatparlr ilaytcaggy dgpplagkta wldmnarrrl
      181 largmsfapd tviangdhiy wdlqtsqnkp farqvrelmw akfggaidts vpmshpknea
      241 iftrvcdyqi sglygttlrs tpayfltddh dtfendefdd kvatlppepy glvgaeltqr
      301 ryypeflpda nrpvwlpggd kagmptdtns afgtlrygal leavlydcrr fldnkgihar
      361 vvpqwvedwl vartraedta hffhvpslpf ayssgklgdw ypdlldrktg rlvanepkag
      421 wqsgwhaqhq rlvaalaqqk qraavivqgd fhasaagsms rsgdlalaqp vhtvmtgtlg
      481 tgdlafpsaf rsiettpals vamqealrpt ekngftiidv tpekmtfslf mwrppepvea
      541 idtlqpalvy evprla
//
LOCUS       WP_258035424             111 aa            linear   BCT 02-MAR-2025
DEFINITION  plasmid mobilization protein [Ralstonia pickettii].
ACCESSION   WP_258035424
VERSION     WP_258035424.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia pickettii
  ORGANISM  Ralstonia pickettii
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Ralstonia.
REFERENCE   1  (residues 1 to 111)
  AUTHORS   Rehman,S., Li,Y.G., Schmitt,A., Lassinantti,L., Christie,P.J. and
            Berntsson,R.P.
  TITLE     Enterococcal PcfF Is a Ribbon-Helix-Helix Protein That Recruits the
            Relaxase PcfG Through Binding and Bending of the oriT Sequence
  JOURNAL   Front Microbiol 10, 958 (2019)
   PUBMED   31134011
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046164.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21983.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Ralstonia pickettii"
                     /db_xref="taxon:329"
     Protein         1..111
                     /product="plasmid mobilization protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=12472
     Region          14..>54
                     /region_name="MobA"
                     /note="plasmid mobilization protein MobA; NF041264"
                     /db_xref="CDD:469164"
ORIGIN      
        1 msrtyfqkkp daekrsvqml vrwtedeaqk vrhsagirqm dvaefirraa lgrkadvdhe
       61 tevvlalsai treiraihas mvergfpppe dallpvllea rqailrvagk k
//
LOCUS       WP_258035489             210 aa            linear   BCT 02-MAR-2025
DEFINITION  hydantoinase/oxoprolinase N-terminal domain-containing protein
            [Ralstonia pickettii].
ACCESSION   WP_258035489
VERSION     WP_258035489.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia pickettii
  ORGANISM  Ralstonia pickettii
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Ralstonia.
REFERENCE   1  (residues 1 to 210)
  AUTHORS   Ye,G.J., Breslow,E.B. and Meister,A.
  TITLE     The amino acid sequence of rat kidney 5-oxo-L-prolinase determined
            by cDNA cloning
  JOURNAL   J Biol Chem 271 (50), 32293-32300 (1996)
   PUBMED   8943290
  REMARK    Erratum:[J Biol Chem 1997 Feb 14;272(7):4646. Guo-jie GE [corrected
            to Ye GJ]]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017215.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05378.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Ralstonia pickettii"
                     /db_xref="taxon:329"
     Protein         1..210
                     /product="hydantoinase/oxoprolinase N-terminal
                     domain-containing protein"
                     /calculated_mol_wt=22160
     Region          3..>116
                     /region_name="HyuA"
                     /note="N-methylhydantoinase A/oxoprolinase/acetone
                     carboxylase, beta subunit [Amino acid transport and
                     metabolism, Secondary metabolites biosynthesis, transport
                     and catabolism]; COG0145"
                     /db_xref="CDD:439915"
ORIGIN      
        1 mgattlvtna lierrgakta lvttrgfgdv leigrewryd lydprlqlpd plvapterfe
       61 vterrgprge vltpldradv eriadelaaa gvesiavcll hsyvdaahee tiaeilaera
      121 wadaaatttp saapqttraa rstpswssga itssaapaas sttptttiat rlrrraaraa
      181 tvmppidasp wpekssavaq gvpvaetmcv
//
LOCUS       WP_258035593             575 aa            linear   BCT 02-MAR-2025
DEFINITION  dermonecrotic toxin domain-containing protein [Pseudomonas putida].
ACCESSION   WP_258035593
VERSION     WP_258035593.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas putida
  ORGANISM  Pseudomonas putida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 575)
  AUTHORS   Kitadokoro,K., Kamitani,S., Miyazawa,M., Hanajima-Ozawa,M.,
            Fukui,A., Miyake,M. and Horiguchi,Y.
  TITLE     Crystal structures reveal a thiol protease-like catalytic triad in
            the C-terminal region of Pasteurella multocida toxin
  JOURNAL   Proc Natl Acad Sci U S A 104 (12), 5139-5144 (2007)
   PUBMED   17360394
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042510.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20178.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Pseudomonas putida"
                     /db_xref="taxon:303"
     Protein         1..575
                     /product="dermonecrotic toxin domain-containing protein"
                     /calculated_mol_wt=63847
     Region          <465..>575
                     /region_name="DUF6543"
                     /note="Family of unknown function (DUF6543); pfam20178"
                     /db_xref="CDD:466329"
ORIGIN      
        1 mpathahnlk havatqfasr ptlrqvvgeq vmkvilehyp lvgvhrpema saaplylmsl
       61 qpdgvwhpqp lvdvvlqall eakpldltpa gdyrlslnpp rrffaiessl etaegdliep
      121 arltdglnal lpvllwhfqr aqidywngda tidrdlwlqq llranlldgl kdealddeqr
      181 kllrdlmmgn rtgldvqlvr valregedtf hellpgllit assevreltl wcspeglvrs
      241 ydpqaafvta lqmqmagryr fdelswqglt vegdafalys allleiller varlrwsaid
      301 svdqlehych vacdpasffa efsdygaggl glalpkglsr adtdsqtayl qamldlsllq
      361 qhspaqgiqd glpdlhtyaa trlreemlhd hpvdanyfpd dliltvetfv sdghglgfgq
      421 ktgekkltlt qlaigrldat aggvvthiah renqlimkwm tidyvrelvq rvdiggsypr
      481 hvqsmldrsa sraehisafa irwritlmfd aararavkrl dkfaygalae fcrsgqegaa
      541 avriaplafk rsptservdv ahgfyvigft sacaa
//
LOCUS       WP_258035674             109 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme [Mycobacterium marinum].
ACCESSION   WP_258035674
VERSION     WP_258035674.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium marinum
  ORGANISM  Mycobacterium marinum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            ulcerans group.
REFERENCE   1  (residues 1 to 109)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Mycobacterium marinum"
                     /db_xref="taxon:1781"
     Protein         1..109
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /calculated_mol_wt=12177
     Region          <1..108
                     /region_name="PRK08617"
                     /note="acetolactate synthase AlsS"
                     /db_xref="CDD:236312"
ORIGIN      
        1 mfsaqeleta trlgldlthv imrdnsydmv gfqevlkygr tsgieladyd vvryakafga
       61 kgirihsmdq faevfrmslt epgvtlidvp vdysrnielf adlhdgvld
//
LOCUS       WP_258035744             313 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Mycobacterium
            marinum].
ACCESSION   WP_258035744
VERSION     WP_258035744.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium marinum
  ORGANISM  Mycobacterium marinum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            ulcerans group.
REFERENCE   1  (residues 1 to 313)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Mycobacterium marinum"
                     /db_xref="taxon:1781"
     Protein         <1..313
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <4..252
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
     Region          <267..>311
                     /region_name="PRK05691"
                     /note="peptide synthase; Validated"
                     /db_xref="CDD:235564"
ORIGIN      
        1 ggwdsqsgeq fwrdylagls aptmlsrala ggqggqvaee pqhielclga evtarlvdga
       61 rsrgvtlnsl vqvawalvlg altgrddvvf giavsgrpse lagmqsmvgl fintvplrvr
      121 ldpqaviadl caavqrdtal vreyayfsha rlrqaagvge mfdtllvfen fptgglavgk
      181 dvpvgaatfh laaahspthf pvtvtaefar dqltlmiaat gdalsvltpe tglgvadlad
      241 rlgrvlvamt gdaglrissl dvvggaeqar pryqapegpv eeilagiqae afglervgvd
      301 ksfsdlggds vgr
//
LOCUS       WP_258035548             358 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GspL/Epsl periplasmic domain-containing protein
            [Pseudomonas].
ACCESSION   WP_258035548
VERSION     WP_258035548.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
REFERENCE   1  (residues 1 to 358)
  AUTHORS   Abendroth,J., Kreger,A.C. and Hol,W.G.
  TITLE     The dimer formed by the periplasmic domain of EpsL from the Type 2
            Secretion System of Vibrio parahaemolyticus
  JOURNAL   J Struct Biol 168 (2), 313-322 (2009)
   PUBMED   19646531
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024105.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12693.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..358
                     /product="GspL/Epsl periplasmic domain-containing protein"
                     /calculated_mol_wt=40209
     Region          15..347
                     /region_name="typeII_sec_gspL"
                     /note="type II secretion system protein L; TIGR01709"
                     /db_xref="CDD:273768"
ORIGIN      
        1 mkfewrrrtp aqawlllrpg avwhwalvqe gilqsqgqge ppanpqahva lvlpaeacsh
       61 frvpappglk reewpllled rllqapheva caclarepgh lrllvvarqq lddwrgqcaa
      121 wglqvvrcwa elqllplpep gcawqwqrmp gmscykglae dgqehwlawp dalggvpqpp
      181 waglhktsls gnwptvfapl dtlpglfert rkvrslpvas hqqqrllaac lvlaavwggl
      241 wlsqqwrqaq lwrsqviavt geqasprhaa qalkrlresv lqqqlrtrql ddlqarlqaw
      301 lranpdwrlq avrfdgqrwh lrlegegnap pwrdmaaaag atvqvqegrv ifdlgaas
//
LOCUS       WP_258035758             142 aa            linear   BCT 02-MAR-2025
DEFINITION  alanine--tRNA ligase-related protein, partial [Mycobacterium
            marinum].
ACCESSION   WP_258035758
VERSION     WP_258035758.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium marinum
  ORGANISM  Mycobacterium marinum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            ulcerans group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013570.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01411.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Mycobacterium marinum"
                     /db_xref="taxon:1781"
     Protein         <1..>142
                     /product="alanine--tRNA ligase-related protein"
                     /GO_function="GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /GO_function="GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
     Region          3..>142
                     /region_name="AlaS"
                     /note="Alanyl-tRNA synthetase [Translation, ribosomal
                     structure and biogenesis]; COG0013"
                     /db_xref="CDD:439784"
ORIGIN      
        1 pyasdnfwqm aetgpcgpcs eifydhgdhi aggppgspde dgdrfieiwn lvfmqfdrqp
       61 dgtlvplpap cvdtgmgler laailqhvht nyeidlfqal irkaseltgt adlenkslrv
      121 iadhiracsf livdgvlpsn eg
//
LOCUS       WP_258035806             544 aa            linear   BCT 02-MAR-2025
DEFINITION  putative Ig domain-containing protein, partial [Pectobacterium
            odoriferum].
ACCESSION   WP_258035806
VERSION     WP_258035806.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium odoriferum
  ORGANISM  Pectobacterium odoriferum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 544)
  AUTHORS   Bentley,S.D., Maiwald,M., Murphy,L.D., Pallen,M.J., Yeats,C.A.,
            Dover,L.G., Norbertczak,H.T., Besra,G.S., Quail,M.A., Harris,D.E.,
            von Herbay,A., Goble,A., Rutter,S., Squares,R., Squares,S.,
            Barrell,B.G., Parkhill,J. and Relman,D.A.
  TITLE     Sequencing and analysis of the genome of the Whipple's disease
            bacterium Tropheryma whipplei
  JOURNAL   Lancet 361 (9358), 637-644 (2003)
   PUBMED   12606174
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017183.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05345.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Pectobacterium odoriferum"
                     /db_xref="taxon:78398"
     Protein         <1..544
                     /product="putative Ig domain-containing protein"
     Region          <2..44
                     /region_name="CADG"
                     /note="Dystroglycan-type cadherin-like domains;
                     smart00736"
                     /db_xref="CDD:214795"
     Region          48..144
                     /region_name="CADG"
                     /note="Dystroglycan-type cadherin-like domains;
                     smart00736"
                     /db_xref="CDD:214795"
     Region          148..244
                     /region_name="CADG"
                     /note="Dystroglycan-type cadherin-like domains;
                     smart00736"
                     /db_xref="CDD:214795"
     Region          248..340
                     /region_name="CADG"
                     /note="Dystroglycan-type cadherin-like domains;
                     smart00736"
                     /db_xref="CDD:214795"
ORIGIN      
        1 igtfsgtpgn advgtlvirv tatdgsntsi stsfgltvtn tndapvvstp ippqsvaqgg
       61 gfnftvpdgt fsdpdgdtlt lsatlangsp lpnwlrfdpa igtfsgtpgn advgtlvirv
      121 tatdgsntsi stsfgltvtn tndapvvatp ippqsvaqgg gfnftvpdgt fndpdgdtlt
      181 lsatlangsp lpswlrfdpt igtfsgtpgn advgtlvirv tatdgsntsi stsfgltvtn
      241 vndapmvatp ippqsvaqgg gfnftvpdgt fsdpdgdtlt lsatlangsp lpswlrfdpt
      301 igtfsgtpgn advgtlvirv tatdgsntsi stsfgltvts sfvsgdpqfk andglgrtps
      361 vsdtrplftq datialpald glianpslgs ftvgndgapk svmsaifatg rqnteggplp
      421 tsqvagtfgr gaasgiginf dstlgsfpsf skdpalggts slastfsgiy lpsltpmevf
      481 sggswkdipl dgannamnnt ddgtgrsvaf tpslhqqlqq igdskqqrla aieqalqesg
      541 qqqg
//
LOCUS       WP_258035868             470 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Pseudomonas putida].
ACCESSION   WP_258035868
VERSION     WP_258035868.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas putida
  ORGANISM  Pseudomonas putida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Pseudomonas putida"
                     /db_xref="taxon:303"
     Protein         1..470
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=49388
     Region          19..416
                     /region_name="PRK10504"
                     /note="putative transporter; Provisional"
                     /db_xref="CDD:182502"
ORIGIN      
        1 mttpavanps rqttfiallv aitffmenld atviatalpq masdfaenpv slnigisayl
       61 lavavfipls gwvadrfgar qvfagaiglf tlaswlcsla anletfiaar vlqgiggalm
      121 vpvgrlvvlr ttekqdlvkm lavitwpglv apvlgppigg livthlswpw ifylniplgv
      181 laiaaawwli pagrpsearr fdllgfafla sacaawligl emlgslgags lpggaalval
      241 gglltllair hcqrhpapll plaamsiatf rasivggtlf rlsisalpfl iplllqvgvg
      301 lspldagllv laifagnlam kpfttgllrr ygfrrvllvn gvigvgsila clglqqgmpw
      361 ywmalvlfig glsrsmqftt ynavgfsevp kpqmgeastl fsmffqlama lgvavaalll
      421 rlsmmlrgge ggitvsdfhw allgvaliac lalvdamrls gnageqvlrt
//
LOCUS       WP_258035484              59 aa            linear   BCT 02-MAR-2025
DEFINITION  2'-5' RNA ligase family protein [Ralstonia pickettii].
ACCESSION   WP_258035484
VERSION     WP_258035484.1
KEYWORDS    RefSeq.
SOURCE      Ralstonia pickettii
  ORGANISM  Ralstonia pickettii
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Ralstonia.
REFERENCE   1  (residues 1 to 59)
  AUTHORS   Mazumder,R., Iyer,L.M., Vasudevan,S. and Aravind,L.
  TITLE     Detection of novel members, structure-function analysis and
            evolutionary classification of the 2H phosphoesterase superfamily
  JOURNAL   Nucleic Acids Res 30 (23), 5229-5243 (2002)
   PUBMED   12466548
REFERENCE   2  (residues 1 to 59)
  AUTHORS   Hofmann,A., Zdanov,A., Genschik,P., Ruvinov,S., Filipowicz,W. and
            Wlodawer,A.
  TITLE     Structure and mechanism of activity of the cyclic phosphodiesterase
            of Appr>p, a product of the tRNA splicing reaction
  JOURNAL   EMBO J 19 (22), 6207-6217 (2000)
   PUBMED   11080166
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014849.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02834.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..59
                     /organism="Ralstonia pickettii"
                     /db_xref="taxon:329"
     Protein         1..59
                     /product="2'-5' RNA ligase family protein"
                     /calculated_mol_wt=6790
     Region          5..>51
                     /region_name="2_5_RNA_ligase2"
                     /note="2'-5' RNA ligase superfamily; cl38987"
                     /db_xref="CDD:453916"
ORIGIN      
        1 msnfrlfial dptpetvavl rraqvclrdv hwsgarwlpp eqwhatlrfl gsprfqcnk
//
LOCUS       WP_258035956             272 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Streptomyces fradiae].
ACCESSION   WP_258035956
VERSION     WP_258035956.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces fradiae
  ORGANISM  Streptomyces fradiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Streptomyces fradiae"
                     /db_xref="taxon:1906"
     Protein         <1..272
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <1..211
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 agafllagvw wltaqratep aphpverhga artsalrspg lqvlvvafva tgaifgavdv
       61 vtvafaeerg hktasslvla vyaggsclag avfgmlrlkg aparrwvvgv lamavsmipl
      121 qlagnltlla valfvaglai aptmvttmal veehvprgkl tegmtwtgtg lavgvalgts
      181 vsgwvvavhg aragyvvpgv agvlaalvaf lgyrrltrpv prregqraqq dpeqseeler
      241 peglerpery dgpersgasg rgerpersgh la
//
LOCUS       WP_258035996             131 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Streptomyces fradiae].
ACCESSION   WP_258035996
VERSION     WP_258035996.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces fradiae
  ORGANISM  Streptomyces fradiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 131)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 131)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 131)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 131)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Streptomyces fradiae"
                     /db_xref="taxon:1906"
     Protein         1..>131
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          48..>131
                     /region_name="LolD"
                     /note="ABC-type lipoprotein export system, ATPase
                     component [Cell wall/membrane/envelope biogenesis];
                     COG1136"
                     /db_xref="CDD:440751"
ORIGIN      
        1 mtdtsagagp gddgaeppgs gteaaraald elerraadrr drpayghdal iscdrlvrvf
       61 sadgvevqal qgldllvreg elmalvgasg sgkstlmnil agldtptaga akvagrdlla
      121 mssrerlryr r
//
LOCUS       WP_258035999             185 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme, partial
            [Streptomyces fradiae].
ACCESSION   WP_258035999
VERSION     WP_258035999.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces fradiae
  ORGANISM  Streptomyces fradiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Streptomyces fradiae"
                     /db_xref="taxon:1906"
     Protein         <1..185
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
     Region          <5..166
                     /region_name="CsdA"
                     /note="Selenocysteine lyase/Cysteine desulfurase [Amino
                     acid transport and metabolism]; COG0520"
                     /db_xref="CDD:440286"
ORIGIN      
        1 vealwhttea rheagspnvi gayavasacr alreagfdal varerelver vreglarvpg
       61 vrvlslfgdd aprvgvlsft vegwsgahla aalsaeygig vrdglfcahp lvrallggse
      121 repaecgapr agsgeraaga vrvsfgagtp dehvdrflra vrelvadgar wsyrtedgrc
      181 vperg
//
LOCUS       WP_258036021             201 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1214 domain-containing protein, partial [Streptomyces fradiae].
ACCESSION   WP_258036021
VERSION     WP_258036021.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces fradiae
  ORGANISM  Streptomyces fradiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018452.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06742.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Streptomyces fradiae"
                     /db_xref="taxon:1906"
     Protein         <1..201
                     /product="DUF1214 domain-containing protein"
     Region          <67..201
                     /region_name="COG5361"
                     /note="Uncharacterized conserved protein [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:444136"
ORIGIN      
        1 ildtaartas givrslafkp rdpgffyypg sswktpfpsr syeflspega rlldsravfy
       61 yfaaaaspam vtaavgagsq yaytaedstg ewldgarsyt ltlpkgipak nfwavnvydp
      121 qtrsllrtdq pypsvnslge gvraeangdt ivhfgptape greanwvrtv pgkgwfvllr
      181 lygpleswyd qswrpgeiep v
//
LOCUS       WP_258036018             452 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Streptomyces
            fradiae].
ACCESSION   WP_258036018
VERSION     WP_258036018.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces fradiae
  ORGANISM  Streptomyces fradiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 452)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Streptomyces fradiae"
                     /db_xref="taxon:1906"
     Protein         <1..>452
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..>452
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
ORIGIN      
        1 mfpvvlrsyd gwdaqikhtk ealravpgrg igfgalrhlr geleavpapr vsfnylgrfd
       61 prgedglyes itlnpggeya peeerahlld vvgqvvdgrl vfdwafstav hdeatvagla
      121 erfaaeltel vghcltdgag gatpsdfplv slsqaevdrl vgdgrdvedv ypltpmqqgm
      181 lfhtllepds psyfeqlmfv ldgvtdiqgl arawqrvada tpvlrtslaw egldepvqrv
      241 hrsapfpvtv gdwsglpeeg qraaleefta aderagidls vaplsrvalf rlsetrvqvv
      301 wtfhhilldg wslplvmadl ftayrggalp arpafrdyha wlseqdteaa haywrdvlag
      361 ydtpvplpyd rapddvrstr starlvddlp agpttavhdf akrhritvna mvqaawalll
      421 saysgqtdvv fgattsgrpt dlpdvestvg if
//
LOCUS       WP_258036118             646 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Pseudomonas putida].
ACCESSION   WP_258036118
VERSION     WP_258036118.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas putida
  ORGANISM  Pseudomonas putida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Pseudomonas putida"
                     /db_xref="taxon:303"
     Protein         <1..>646
                     /product="Ig-like domain-containing protein"
     Region          <1..395
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          <318..>646
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 gsapagslve vrdangsvig svqagndgtf tinlnpaqan gelldvvaid adgnsslpaq
       61 isapditppn qasdlvvsad gatltgrgep gstvqvtnaq gtllgsavvg angqfsvtla
      121 paqtdgqald vvlrdaagns stvnitapdt dgplqpsgln vditglhltg lgqvgstvtv
      181 raadgsvlgt alvgadgrfd vtltaaqrng esltveatdr lgnsagpvtf tapdltppqv
      241 vgnptidgtg ttvsgsgepg atvtvrgpgg svlgsalvag dgsfavtlvp pqtngqalti
      301 eqtdlagnvs tavglpapdt qapnapigll lsadgavvtg sgepgaqvkv tgvggvvlgt
      361 avvqadgsfs vslipaqlng qtlsvtqtdg ggnasgagtv vasdlqapsp avvlglvsgg
      421 tvlngageig ttvevrnsag qllgdgivga dgsfsitlsp pqtngqvlsv vlidgagnns
      481 pstsftapdt sgpatpaglq vsadgssvhg tgevgstvev rnaagdllgs vvvpaggsfs
      541 vtltpaqldg qtlqvslldp agnastsapv napditppel pvgllvspdg stvtgsapga
      601 ssvtvtdpng nvvtvavngd gsfsvpldtp ltngetlsvv vsdaag
//
LOCUS       WP_258036151             454 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein [Pseudomonas
            putida].
ACCESSION   WP_258036151
VERSION     WP_258036151.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas putida
  ORGANISM  Pseudomonas putida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 454)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Pseudomonas putida"
                     /db_xref="taxon:303"
     Protein         1..454
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /calculated_mol_wt=50231
     Region          7..422
                     /region_name="WzzB"
                     /note="LPS O-antigen chain length determinant protein,
                     WzzB/FepE family [Cell wall/membrane/envelope biogenesis];
                     COG3765"
                     /db_xref="CDD:442979"
ORIGIN      
        1 mnsvvrppsm aasgeidlfn vlrtiwrrrf liaavggvca lvgaavayni tpvyeastsl
       61 rpvalnqlda lnrskiyslp paealkrvga tldsytarld ffrsrpdlid afqdegqsve
      121 qafedfnrda lsvvladpkk ndllsdfvgl kmryekgvng aailndfvdy aierersqls
      181 ndmqiilanr laevdkrlns avseyragne sriarleead aikraqlnde lkalrvqlkl
      241 rrearlaeld eaisvarslg lkkpstpslm adegsansnv irtevngrpv plyfmgtevl
      301 eaeraalrkr asddfvepri rqirkelill stnrkvqaik araseaafle gieglrvera
      361 rlqaidtqlq glhlvnidqr avpsnkplkp rktlivliaf igglllgtva allrgafkdh
      421 arrqrvleie gavqrvmpee lkgqnharlg eaqa
//
LOCUS       WP_258036219             160 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: aldo/keto reductase [unclassified Streptomyces].
ACCESSION   WP_258036219
VERSION     WP_258036219.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 160)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 160)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..160
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=17715
     Region          <3..>121
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
ORIGIN      
        1 mtgklisadr ehfvlatkfs lgaaprpdts rtgnsrknmv asveaslkrl gtdhidllwv
       61 hfpdeltpmd ellrglddpv sagrihhaal snfpawrvsr avtladlknw apivgiqhey
      121 srgatgarrr darprggrrr rtgqdrrgec qpaghedprr
//
LOCUS       WP_258035151             270 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase TerL endonuclease subunit, partial [Bacillus
            thuringiensis].
ACCESSION   WP_258035151
VERSION     WP_258035151.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 270)
  AUTHORS   Xu,R.G., Jenkins,H.T., Chechik,M., Blagova,E.V., Lopatina,A.,
            Klimuk,E., Minakhin,L., Severinov,K., Greive,S.J. and Antson,A.A.
  TITLE     Viral genome packaging terminase cleaves DNA using the canonical
            RuvC-like two-metal catalysis mechanism
  JOURNAL   Nucleic Acids Res 45 (6), 3580-3590 (2017)
   PUBMED   28100693
REFERENCE   2  (residues 1 to 270)
  AUTHORS   Hilbert,B.J., Hayes,J.A., Stone,N.P., Duffy,C.M., Sankaran,B. and
            Kelch,B.A.
  TITLE     Structure and mechanism of the ATPase that powers viral genome
            packaging
  JOURNAL   Proc Natl Acad Sci U S A 112 (29), E3792-E3799 (2015)
   PUBMED   26150523
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042863.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20441.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         <1..270
                     /product="terminase TerL endonuclease subunit"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
     Region          <10..250
                     /region_name="YmfN"
                     /note="Phage terminase-like protein, large subunit,
                     contains N-terminal HTH domain [Mobilome: prophages,
                     transposons]; COG4626"
                     /db_xref="CDD:443665"
ORIGIN      
        1 yarglfkkvm rqyknlendp snrenfmtkr mnlpevdltk svapweeimr tgfeedgvtl
       61 reipdlrhki avggldfasi kdfaavgllf kygedyiwks hsfvrkgfld kvklkvpike
      121 weekglltil depvinishi vdwfvkmrel ygvntivadt frldlvktal eaegfillyi
      181 rnpkaihsll aprvetlfan nhiifgdnpl mrwytnnvyv hikkdgnkey lkkdefkrkt
      241 dgfqafihal wqadkilvde fdfmldgikf
//
LOCUS       WP_258036230             214 aa            linear   BCT 02-MAR-2025
DEFINITION  barstar family protein [Streptomyces sp. SM10].
ACCESSION   WP_258036230
VERSION     WP_258036230.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM10
  ORGANISM  Streptomyces sp. SM10
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 214)
  AUTHORS   Buckle,A.M., Schreiber,G. and Fersht,A.R.
  TITLE     Protein-protein recognition: crystal structural analysis of a
            barnase-barstar complex at 2.0-A resolution
  JOURNAL   Biochemistry 33 (30), 8878-8889 (1994)
   PUBMED   8043575
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013500.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01337.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Streptomyces sp. SM10"
                     /db_xref="taxon:565556"
     Protein         1..214
                     /product="barstar family protein"
                     /calculated_mol_wt=23399
     Region          120..206
                     /region_name="Barstar_like"
                     /note="Barstar is an intracellular inhibitor of barnase,
                     an extracellular ribonuclease of Bacillus
                     amyloliquefaciens. Barstar binds tightly to the barnase
                     active site and sterically blocks it, thus inhibiting its
                     potentially lethal RNase activity inside the...; cl01048"
                     /db_xref="CDD:470045"
     Site            order(147,149,151..153,157,195)
                     /site_type="other"
                     /note="RNAase interaction site [polypeptide binding]"
                     /db_xref="CDD:240166"
ORIGIN      
        1 mksldhvgsr ralagnawid ildaegatmg syfvndvtvv dvrpsargag lvdvtvtlwc
       61 dqalpgagei wdlirtgrln rtgmwhvldp vdrhawlsva lwsreyqcrg kldaparqvf
      121 tldgrqcvdv dsfycalgea ingpggyfgw tldalvdclr ggwgatspft lqwqysavar
      181 arlaelratg egeailfdll leifqeqgiq vilq
//
LOCUS       WP_258036234             382 aa            linear   BCT 02-MAR-2025
DEFINITION  thioesterase domain-containing protein [Pseudomonas putida].
ACCESSION   WP_258036234
VERSION     WP_258036234.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas putida
  ORGANISM  Pseudomonas putida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 382)
  AUTHORS   Schneider,A. and Marahiel,M.A.
  TITLE     Genetic evidence for a role of thioesterase domains, integrated in
            or associated with peptide synthetases, in non-ribosomal peptide
            biosynthesis in Bacillus subtilis
  JOURNAL   Arch Microbiol 169 (5), 404-410 (1998)
   PUBMED   9560421
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013166.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00975.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Pseudomonas putida"
                     /db_xref="taxon:303"
     Protein         1..382
                     /product="thioesterase domain-containing protein"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=41693
     Region          <2..323
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
ORIGIN      
        1 mqqaynapqg tleqalatlw qtalnveris rddhffelgg hsllaiqlla sikqelglav
       61 riqdllaypr idllaahlgr ehartspciv plnrpatplp alfcihpsgg mvfsyqplar
      121 cleqqacvyg vqhrggspap aeqqgwqami adytaqirqa qpsgpyrlmg wslggsiawd
      181 iarqleqagc evaflglvds tlpeaqlsra afphhtprsa rhsdapgqre lqdtvelfgl
      241 lfpqarlaat eqlhanptqd ikafyqwata hladagtdvq gvlasakaqi inaqafdihd
      301 qleasfadft ltplrvkpsc wwsqvhksaa hihaaeqvir qfcaggeldv slpspyphet
      361 mmleqplids fieafgrscp ap
//
LOCUS       WP_258036240             466 aa            linear   BCT 02-MAR-2025
DEFINITION  site-specific integrase [Streptomyces sp. SM10].
ACCESSION   WP_258036240
VERSION     WP_258036240.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM10
  ORGANISM  Streptomyces sp. SM10
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 466)
  AUTHORS   Subramanya,H.S., Arciszewska,L.K., Baker,R.A., Bird,L.E.,
            Sherratt,D.J. and Wigley,D.B.
  TITLE     Crystal structure of the site-specific recombinase, XerD
  JOURNAL   EMBO J 16 (17), 5178-5187 (1997)
   PUBMED   9311978
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014898.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02899.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Streptomyces sp. SM10"
                     /db_xref="taxon:565556"
     Protein         1..466
                     /product="site-specific integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=53884
     Region          37..429
                     /region_name="XerD"
                     /note="Site-specific recombinase XerD [Replication,
                     recombination and repair]; COG4974"
                     /db_xref="CDD:443999"
ORIGIN      
        1 maldgatyts rsralkdgtp fflgadmrpl ephcsffyel aktleakslr dytydfldld
       61 dflarldppa dllsateddl iayrdyciey rdepmapatw krrratinrf ydwavdearl
      121 ldrrpyyrkk ngrdilnwgp tseldvrhlt feqwwfldrv glrgllpdgt adptfrsgha
      181 lrdscggnls ittglrlref salldievgs prrdgstkkv elqaiakfgl prtteiqdat
      241 lreldwyrrt eragflrkaa knlhqqrdel fvvddidtra mkvsgiqdgr rrtyrikamk
      301 aplrritvve gdhglesmal fvgrngrmis sqrweqifag aharavriat ehnlplempg
      361 qvrihdlrht favymleqlt elvrdqdeeq qrrtgrphay aadhvsrnpf ltvmrllghr
      421 rpestmrylt ykrktnllvs ravkdwndqd rtyadlaarq aagwsa
//
LOCUS       WP_258035702             270 aa            linear   BCT 02-MAR-2025
DEFINITION  PPE domain-containing protein, partial [Mycobacterium marinum].
ACCESSION   WP_258035702
VERSION     WP_258035702.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium marinum
  ORGANISM  Mycobacterium marinum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            ulcerans group.
REFERENCE   1  (residues 1 to 270)
  AUTHORS   Gijsbers,A., Eymery,M., Gao,Y., Menart,I., Vinciauskaite,V.,
            Siliqi,D., Peters,P.J., McCarthy,A. and Ravelli,R.B.G.
  TITLE     The crystal structure of the EspB-EspK virulence factor-chaperone
            complex suggests an additional type VII secretion mechanism in
            Mycobacterium tuberculosis
  JOURNAL   J Biol Chem 299 (1), 102761 (2023)
   PUBMED   36463964
REFERENCE   2  (residues 1 to 270)
  AUTHORS   Gijsbers,A., Vinciauskaite,V., Siroy,A., Gao,Y., Tria,G.,
            Mathew,A., Sanchez-Puig,N., Lopez-Iglesias,C., Peters,P.J. and
            Ravelli,R.B.G.
  TITLE     Priming mycobacterial ESX-secreted protein B to form a channel-like
            structure
  JOURNAL   Curr Res Struct Biol 3, 153-164 (2021)
   PUBMED   34337436
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 270)
  AUTHORS   Piton,J., Pojer,F., Wakatsuki,S., Gati,C. and Cole,S.T.
  TITLE     High resolution CryoEM structure of the ring-shaped virulence
            factor EspB from Mycobacterium tuberculosis
  JOURNAL   J Struct Biol X 4, 100029 (2020)
   PUBMED   32875288
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046522.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21856.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Mycobacterium marinum"
                     /db_xref="taxon:1781"
     Protein         1..>270
                     /product="PPE domain-containing protein"
     Region          7..83
                     /region_name="EspB_PE"
                     /note="ESX-1 secreted protein B PE domain; pfam18625"
                     /db_xref="CDD:465827"
ORIGIN      
        1 mltvnrneil aradeldtpi anppsdpvka acgletavtg akqiklsadn lrtrlavgaq
       61 erhriaefmr saakayedvd eqaavalrng gngsvspaal aanpaadppa ladtetvsst
      121 llpdfidlka aankihnkgd qgksllhfad ewtkyaqtir dsfsrfrefe dwdgdaaetv
      181 qdallqhwdw lsgmaelsik iakqasdlaq vqhsavqkhp tlhdvvvler eicvaydatk
      241 yditgtalat llilkskytk khetsaevls
//
LOCUS       WP_258036256             182 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Streptomyces sp. SM10].
ACCESSION   WP_258036256
VERSION     WP_258036256.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM10
  ORGANISM  Streptomyces sp. SM10
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025052.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13671.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Streptomyces sp. SM10"
                     /db_xref="taxon:565556"
     Protein         1..182
                     /product="AAA family ATPase"
                     /calculated_mol_wt=19744
     Region          9..158
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Site            order(14,19..22)
                     /site_type="active"
                     /db_xref="CDD:238977"
ORIGIN      
        1 mdtgpgpsvv litgvmaagk stvaqllaer lpraahvrgd lfrrmlvsgr eelmpgetae
       61 araqlelryr lsalvadeyv rdgwtaviqd ivlgedltry varvrarply vvvlapstaa
      121 vrdreaarpk tgygawtvea ldrdlregtp rigltldtsr qtpqetvaai laglpearir
      181 td
//
LOCUS       WP_258036258             522 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Streptomyces sp. NPDC049944].
ACCESSION   WP_258036258
VERSION     WP_258036258.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. NPDC049944
  ORGANISM  Streptomyces sp. NPDC049944
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Streptomyces sp. NPDC049944"
                     /db_xref="taxon:3155657"
     Protein         1..522
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=54815
     Region          1..407
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(8..9,12..13,16,48,102..103,105..107,110,131,
                     134..135,259,262..263,266..268,271,299,303,355..356,360,
                     364,380,383..384,387..388,391)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:341046"
ORIGIN      
        1 mlfavsmtfi dqtivsiaap niidelglss sgmqwvvnay llslaaffal ggrlsdiigh
       61 rrvmvigtll fvvssvlcgc vpagdyaqtw livfratqgl gaalmfpaal avviavfpve
      121 krgralalff glsgaltavg pllggwltaw twraifwvnv pvavialvla amaripetrr
      181 rekldvpgav lvavgmglsv lgfqqasawg wssvatwacv vgglavlvvf cryelrvaep
      241 liklhvfrdr aftvdmlvlf famlafvpvf ffasvyaqvs lsaspnqaal yllyffigfg
      301 iasqwggril drrgarpamk igtalgavgf glwankltdl smhdqwpyaa lagagigfll
      361 apastdavnr sigasygevt gvtqtvrnya asigiavfgt ilthvttdkv retltskgvp
      421 advandaars vaeavtgnpd aqaptgdgri atlmrdsida vrldfaeanq rvfygmaial
      481 avaylcahrh pgtrvtgdga tpspehpdga ggkaaagdap gt
//
LOCUS       WP_258035752             237 aa            linear   BCT 02-MAR-2025
DEFINITION  PPE domain-containing protein, partial [Mycobacterium marinum].
ACCESSION   WP_258035752
VERSION     WP_258035752.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium marinum
  ORGANISM  Mycobacterium marinum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            ulcerans group.
REFERENCE   1  (residues 1 to 237)
  AUTHORS   Gijsbers,A., Eymery,M., Gao,Y., Menart,I., Vinciauskaite,V.,
            Siliqi,D., Peters,P.J., McCarthy,A. and Ravelli,R.B.G.
  TITLE     The crystal structure of the EspB-EspK virulence factor-chaperone
            complex suggests an additional type VII secretion mechanism in
            Mycobacterium tuberculosis
  JOURNAL   J Biol Chem 299 (1), 102761 (2023)
   PUBMED   36463964
REFERENCE   2  (residues 1 to 237)
  AUTHORS   Gijsbers,A., Vinciauskaite,V., Siroy,A., Gao,Y., Tria,G.,
            Mathew,A., Sanchez-Puig,N., Lopez-Iglesias,C., Peters,P.J. and
            Ravelli,R.B.G.
  TITLE     Priming mycobacterial ESX-secreted protein B to form a channel-like
            structure
  JOURNAL   Curr Res Struct Biol 3, 153-164 (2021)
   PUBMED   34337436
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 237)
  AUTHORS   Piton,J., Pojer,F., Wakatsuki,S., Gati,C. and Cole,S.T.
  TITLE     High resolution CryoEM structure of the ring-shaped virulence
            factor EspB from Mycobacterium tuberculosis
  JOURNAL   J Struct Biol X 4, 100029 (2020)
   PUBMED   32875288
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046522.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21856.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Mycobacterium marinum"
                     /db_xref="taxon:1781"
     Protein         1..>237
                     /product="PPE domain-containing protein"
     Region          <2..38
                     /region_name="EspB_PE"
                     /note="ESX-1 secreted protein B PE domain; pfam18625"
                     /db_xref="CDD:465827"
ORIGIN      
        1 msaesmrayl qsgaqarqrl aqfmrdaaka yeqidegaat algtdghgig appvpagtdl
       61 apvalsdtlt vaaakyppdf telktaaqql nkpdqgvslk kfahdwnayn ltiqqslgrf
      121 rdfenwegea atavqaafdq hrdwlrlmar lsttmakqas gleqahhwai gqhptltait
      181 elendlrhah rgnqrialmk eyaklqkkse evltgyatrt itepvqpprp paapthn
//
LOCUS       WP_258036325             211 aa            linear   BCT 02-MAR-2025
DEFINITION  SRPBCC family protein [Streptomyces sp. NPDC049944].
ACCESSION   WP_258036325
VERSION     WP_258036325.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. NPDC049944
  ORGANISM  Streptomyces sp. NPDC049944
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 211)
  AUTHORS   Iyer,L.M., Koonin,E.V. and Aravind,L.
  TITLE     Adaptations of the helix-grip fold for ligand binding and catalysis
            in the START domain superfamily
  JOURNAL   Proteins 43 (2), 134-144 (2001)
   PUBMED   11276083
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10604.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Streptomyces sp. NPDC049944"
                     /db_xref="taxon:3155657"
     Protein         1..211
                     /product="SRPBCC family protein"
                     /calculated_mol_wt=22313
     Region          53..202
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(55,57,59,68..70,72..73,88,100,102,104,106,123,125,
                     127,134,136,151..152,154,156,165,167,169,171,183..187,
                     189..190,193..195,198)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176854"
ORIGIN      
        1 mrvriaavta slvtagiivs agpvqaapal agstpqtgal qcrgkgvdpg aavryrsdil
       61 ikaplrsift lqtdvehwpt wqapvlsmkr ldpgplrkgs qfrwttpapa tpttpestle
      121 itstirqlen dscirwtgpa vgdglrideg vhvwtftevr ggvrvrtees wtgaqveadv
      181 ptatsllgag ldqwlrelka aakaggdgpc r
//
LOCUS       WP_258036314              90 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: phage tail tube protein [Pseudomonas].
ACCESSION   WP_258036314
VERSION     WP_258036314.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
REFERENCE   1  (residues 1 to 90)
  AUTHORS   Pell,L.G., Cumby,N., Clark,T.E., Tuite,A., Battaile,K.P.,
            Edwards,A.M., Chirgadze,N.Y., Davidson,A.R. and Maxwell,K.L.
  TITLE     A conserved spiral structure for highly diverged phage tail
            assembly chaperones
  JOURNAL   J Mol Biol 425 (14), 2436-2449 (2013)
   PUBMED   23542344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16460.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         1..90
                     /product="phage tail tube protein"
                     /calculated_mol_wt=8982
     Region          <34..84
                     /region_name="Phage_TTP_11"
                     /note="Phage tail tube, TTP, lambda-like; pfam16460"
                     /db_xref="CDD:293069"
ORIGIN      
        1 mvgfnitnag sgytsapsit ltggagsgaa asavlgdadd fvlpptrtwf lfdgyvsdfp
       61 fdfaanaavt taatiqrsgg sawirkttna
//
LOCUS       WP_258036382             491 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6801 domain-containing protein [unclassified
            Streptomyces].
ACCESSION   WP_258036382
VERSION     WP_258036382.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042850.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20611.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..491
                     /product="DUF6801 domain-containing protein"
                     /calculated_mol_wt=50869
     Region          41..195
                     /region_name="DUF6801"
                     /note="Family of unknown function (DUF6801); pfam20611"
                     /db_xref="CDD:466760"
ORIGIN      
        1 mggtrrrtar gaavatavli ggmipgaqaa sgvqeidael aytcafpegd qpvtvrlaae
       61 vpesthagqv iqpeemvldl tlpeaasaal aqsgatavsa eaqlsvdvvq egrqaraewv
      121 gttpeaapvp gageltlsta gsvpyvrpea pgdlefkasa lsvdlavkna dgapaepptl
      181 svqcvvdedq etalatvgvg gegetptpap sasdewpdde eqeqpaapev gkrakeaapv
      241 aappcvgdpl naegrdmlay vagyanvtkl dgatkfppac arihtydgen wfefpyvhav
      301 lnaaivldyk gkpqlppttg tfltfgfmpt tatlemtqip pkpdspadrn vvshgitdll
      361 nggftkttts idmdfvlrlh dvkvngvald vgkncrterp frlslaglgt wdpekgnegy
      421 tvvtggeltg svtippfegc gvdedldslf taslsgspgf vkqvqgapcv pstgnactpe
      481 fepqeipkar r
//
LOCUS       WP_258036445             172 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: transposase [unclassified Streptomyces].
ACCESSION   WP_258036445
VERSION     WP_258036445.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017416.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05598.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..172
                     /product="transposase"
                     /calculated_mol_wt=19357
     Region          1..133
                     /region_name="COG3666"
                     /note="Transposase, IS1182 family [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:442883"
ORIGIN      
        1 mwvrdhldgl wddrdfaswy prdgrpgisp aqlatvcvlq fllnlsdrqa aeavrcridf
       61 tyalaldldd pgfhhsvltd frdrlceddr adqllslslt rmreagvvae rgrqrtdstq
      121 vlaaardlts lellleavra aleeaaqrap lracfcrsra vstlhrhpvr cl
//
LOCUS       WP_258036514             221 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: molybdopterin-dependent oxidoreductase [unclassified
            Streptomyces].
ACCESSION   WP_258036514
VERSION     WP_258036514.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 221)
  AUTHORS   Kisker,C., Schindelin,H., Pacheco,A., Wehbi,W.A., Garrett,R.M.,
            Rajagopalan,K.V., Enemark,J.H. and Rees,D.C.
  TITLE     Molecular basis of sulfite oxidase deficiency from the structure of
            sulfite oxidase
  JOURNAL   Cell 91 (7), 973-983 (1997)
   PUBMED   9428520
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012401.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00174.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..221
                     /product="molybdopterin-dependent oxidoreductase"
                     /calculated_mol_wt=23425
     Region          41..209
                     /region_name="MsrP"
                     /note="Molybdopterin-dependent catalytic subunit of
                     periplasmic DMSO/TMAO and protein-methionine-sulfoxide
                     reductases [Energy production and conversion]; COG2041"
                     /db_xref="CDD:441644"
ORIGIN      
        1 mlglgaagva aapvlqgave sglgavadkd ptglsgllpn gggfryysvt ssvprktsad
       61 yrltvdglvd rpatytldsl kalpqtrlvr dvqcvtgwrv petpfegvtl salldaagvr
      121 sgakairftc fdgayseslt leqarrpdvl valrmqdkal ahshggpvrl yvapmyfyks
      181 akwlsgitvt dsvrpgywee lgydvdawvg rsngrddapt v
//
LOCUS       WP_258036549             609 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6571 family protein [Streptomyces sp. SM10].
ACCESSION   WP_258036549
VERSION     WP_258036549.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM10
  ORGANISM  Streptomyces sp. SM10
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042457.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20211.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Streptomyces sp. SM10"
                     /db_xref="taxon:565556"
     Protein         1..609
                     /product="DUF6571 family protein"
                     /calculated_mol_wt=66945
     Region          33..588
                     /region_name="DUF6571"
                     /note="Family of unknown function (DUF6571); pfam20211"
                     /db_xref="CDD:466362"
ORIGIN      
        1 mrgkingilk raneadelca wglralikhh lndfgstdls gvadarkmra eeqqqaqngr
       61 eaaklyarwe hlddgererl ltlaeegkds pafaeqlmtn lsyrgreqqd avlllassle
      121 sggrdgqlss sdarlykals gslatatgpd ssigspggvt aawtdklist ardgnglprq
      181 hpgaigggaa tlkdltdlma advgdkavyd pnkdskekss pwkkdegdpv yseafltevg
      241 dtirewetdn ddaydgvmkn wqgtqedpmk gllnamsrnp sasthyfdpd ttdnlkyfle
      301 drewpggeve skmpdetqyt saraelglal esaatgrvpg spmhpvpvhh daaetaifer
      361 vmgeytealh kdqsavpvsm rlpmadmiad ygsdvhqilg kkmdgptdfn qleidrgdlt
      421 riirataedp naykmihasq svvtseglnh fpadsfrked pelrawvkqs asvlghldgv
      481 rgdviydlgq aekdanaykr vlnyhivggl ltpipiagda iqrsvdagln nhlndqnarv
      541 daetrnnmir hydysekqmy gmlrrmater glskeeldas pgeyedhlqs iteqwyqngm
      601 gdadkwmgq
//
LOCUS       WP_258036600             216 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF5947 family protein [unclassified Streptomyces].
ACCESSION   WP_258036600
VERSION     WP_258036600.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040271.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19372.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..216
                     /product="DUF5947 family protein"
                     /calculated_mol_wt=23820
     Region          29..207
                     /region_name="DUF5947"
                     /note="Family of unknown function (DUF5947); pfam19372"
                     /db_xref="CDD:466058"
ORIGIN      
        1 milqgrpssp aasllrisrr rpapvagerc emcaepvghe hahvvnldgr almctcrpcy
       61 llfgeegarq nyravperyl sfegtalder twdelqipvg laflfrnsvq drtiafypgp
      121 agateselpl dawdtivgsh pglavlrpdv eallvrrtqd gqdchlvpid acyhlvgrlr
      181 tvwrgfdggr eaheamnaff sdvqrrsrpa dmagap
//
LOCUS       WP_258036571              76 aa            linear   BCT 02-MAR-2025
DEFINITION  S4 domain-containing protein, partial [Bacillus thuringiensis].
ACCESSION   WP_258036571
VERSION     WP_258036571.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 76)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Novel predicted RNA-binding domains associated with the translation
            machinery
  JOURNAL   J Mol Evol 48 (3), 291-302 (1999)
   PUBMED   10093218
REFERENCE   2  (residues 1 to 76)
  AUTHORS   Davies,C., Gerstner,R.B., Draper,D.E., Ramakrishnan,V. and
            White,S.W.
  TITLE     The crystal structure of ribosomal protein S4 reveals a two-domain
            molecule with an extensive RNA-binding surface: one domain shows
            structural homology to the ETS DNA-binding motif
  JOURNAL   EMBO J 17 (16), 4545-4558 (1998)
   PUBMED   9707415
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013633.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01479.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         <1..>76
                     /product="S4 domain-containing protein"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
     Region          <3..75
                     /region_name="PRK13354"
                     /note="tyrosyl-tRNA synthetase; Provisional"
                     /db_xref="CDD:237360"
ORIGIN      
        1 fkdmptfyas ketknivewl vdlgiepsrr qaredinnga ismngekvtd vntditvkns
       61 fdgrfiiirk gkknys
//
LOCUS       WP_258036579             257 aa            linear   BCT 02-MAR-2025
DEFINITION  lyase family protein, partial [Bacillus thuringiensis].
ACCESSION   WP_258036579
VERSION     WP_258036579.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00206.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         1..>257
                     /product="lyase family protein"
     Region          1..>257
                     /region_name="PRK14515"
                     /note="aspartate ammonia-lyase; Provisional"
                     /db_xref="CDD:237743"
ORIGIN      
        1 mamtnknvrv endflggkel pieayygiqt lravenfpit gykiheslir afaivkkaaa
       61 lantdvgrle lnkggaiaea aqeildgkwh dhfivdpiqg gagtsmnmna nevianrale
      121 llgmekgdyh yispnshvnm aqstndafpt aihiatlnal egllqtmgym hdvfelkaeq
      181 fdhvikmgrt hlqdavpirl gqefkaysrv lerdmkriqq srqhlyevnm gatavgtgln
      241 adpeyieavv khlaais
//
LOCUS       WP_258036343             945 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 48 protein [Streptomyces sp.
            NPDC049944].
ACCESSION   WP_258036343
VERSION     WP_258036343.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. NPDC049944
  ORGANISM  Streptomyces sp. NPDC049944
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 945)
  AUTHORS   Sukharnikov,L.O., Alahuhta,M., Brunecky,R., Upadhyay,A.,
            Himmel,M.E., Lunin,V.V. and Zhulin,I.B.
  TITLE     Sequence, structure, and evolution of cellulases in glycoside
            hydrolase family 48
  JOURNAL   J Biol Chem 287 (49), 41068-41077 (2012)
   PUBMED   23055526
REFERENCE   2  (residues 1 to 945)
  AUTHORS   Guimaraes,B.G., Souchon,H., Lytle,B.L., David Wu,J.H. and
            Alzari,P.M.
  TITLE     The crystal structure and catalytic mechanism of cellobiohydrolase
            CelS, the major enzymatic component of the Clostridium thermocellum
            Cellulosome
  JOURNAL   J Mol Biol 320 (3), 587-596 (2002)
   PUBMED   12096911
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02011.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Streptomyces sp. NPDC049944"
                     /db_xref="taxon:3155657"
     Protein         1..945
                     /product="glycoside hydrolase family 48 protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_function="GO:0008810 - cellulase activity [Evidence
                     IEA]"
                     /GO_process="GO:0030245 - cellulose catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=99887
     Region          16..115
                     /region_name="CBM_2"
                     /note="Cellulose binding domain; pfam00553"
                     /db_xref="CDD:425748"
     Region          126..191
                     /region_name="Big_7"
                     /note="Bacterial Ig domain; pfam17957"
                     /db_xref="CDD:436171"
     Region          168..>308
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          316..943
                     /region_name="Glyco_hydro_48"
                     /note="Glycosyl hydrolase family 48; pfam02011"
                     /db_xref="CDD:426560"
ORIGIN      
        1 mtaaagtpaq aaavqcsvdy kandwgsgfs aeltvtnrst aaidgwtlty dyagnqkltn
       61 gwngtwsqag rtvtvknaaw ngaiaagaav ttgaqfsysg tntaptafav ngtacvgahq
      121 ppitvltspa agavfsagdp vpmaataaaa dgagiskvef yddtellgtd ttspytysat
      181 glstgahsvy araydslgas aestpagitv aagpavvatp aqlgvqqgks gtfnvslsta
      241 passvtvsaa rsagnsglsv tggasltftt snwstpqkvt vsadgsgtga atftvtapgh
      301 skaevtvtql aeakeydarf ldlygkitdp angyfssegi pyhsvetliv eapdqghett
      361 seaysyliwl qamygkitgd wakfngawat mekymiptha dqptnsfyna skpatyapeh
      421 dtpneypavl dgsatsgadp iaselksayg tddiygmhwi qdvdnvygyg nspgkcsagp
      481 tetgpsyint fqrgpqesvw etvthptcdn ftyggdngyl dlftgdasya kqwkftnapd
      541 adaravqaay wadvwakeqg ksaevsatvg kaakmgdylr ysmfdkyfkk vgncvgpttc
      601 pagsgkdsah ylmswyyawg gatdtsagws wrigsshahg gyqnpmaaya lsavgdlkpk
      661 satgqqdwak sldrqmdfyq wlqsdegaia ggatnswkgs yaqppagtpt fygmyydekp
      721 vyhdppsnqw fgfqawsmer vaeyyhesgd aqakavldkw vdwalsetti npdgtylmps
      781 tlkwsgspdt wnasapgans glhvtvadyt ndvgvagaya rtltyyaaks gdaeakatae
      841 glldgmwshy qddtgiavpe tradynrfdd pvyvpngwtg ampngdtvdn dstflsirsf
      901 ykddpnwpkv qayldggaap vftyhrfwaq tdvalalgay adlle
//
LOCUS       WP_258036632             209 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase family protein [Streptomyces sp. SM10].
ACCESSION   WP_258036632
VERSION     WP_258036632.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM10
  ORGANISM  Streptomyces sp. SM10
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13808.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Streptomyces sp. SM10"
                     /db_xref="taxon:565556"
     Protein         1..209
                     /product="transposase family protein"
                     /calculated_mol_wt=21773
     Region          58..>209
                     /region_name="transpos_ISAs1"
                     /note="ISAs1 family transposase; NF033564"
                     /db_xref="CDD:411194"
ORIGIN      
        1 mpartsspip saleqlgspt dpltssdvad lrrflilvad prdarglryp alallcaavs
       61 avltgarsli aisewitdap qhvlgvlgfa adpltglrpv phaatvrrll qrvdgdalda
      121 aisaylqart pppvepdaee gpvrrviavd gkvvrgsrtq taaaiqllaa mdhhgvvlaq
      181 rqvasksnei psfaplldgl elantvvta
//
LOCUS       WP_258036651             258 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Streptomyces sp. SM10].
ACCESSION   WP_258036651
VERSION     WP_258036651.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM10
  ORGANISM  Streptomyces sp. SM10
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Streptomyces sp. SM10"
                     /db_xref="taxon:565556"
     Protein         1..258
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=27701
     Region          4..118
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(5..7,21,37..39)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133389"
ORIGIN      
        1 mstmrisqla ercgvpattl rfyenagllp adrnasgyrl ygeeaverla fiaaakhlgl
       61 pleeigella vweagacadv kadlrprisa rldeaeqrta eltafaaslh talehldalp
      121 dratrcdpec gfltqpapig asravdivls psrraaeete swrtapvacs ltgdglgerk
      181 aqwhrlldga vrqeipdglr ltmpasragg laalaaeeqq ccpffdfrlh lngqylhvev
      241 raatagaell tdlfgpta
//
LOCUS       WP_258036669             205 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Pseudomonas putida].
ACCESSION   WP_258036669
VERSION     WP_258036669.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas putida
  ORGANISM  Pseudomonas putida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 205)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Pseudomonas putida"
                     /db_xref="taxon:303"
     Protein         <1..>205
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>196
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 argitintah veynstirhy ahvdcpghad yvknmitgaa qmdgailvcs aadgpmpqtr
       61 ehillsrqvg vpyivvflnk adlvddaell elvemevrdl lstydfpgdd tpiiigsarm
      121 alegkddnem gttavkklve tldsyipepv raidqpflmp iedvfsisgr gtvvtgrier
      181 givrvqdple ivglrdtttt tctgv
//
LOCUS       WP_258036692             620 aa            linear   BCT 02-MAR-2025
DEFINITION  LpqB family beta-propeller domain-containing protein [Streptomyces
            sp. SM10].
ACCESSION   WP_258036692
VERSION     WP_258036692.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM10
  ORGANISM  Streptomyces sp. SM10
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 620)
  AUTHORS   Hoskisson,P.A. and Hutchings,M.I.
  TITLE     MtrAB-LpqB: a conserved three-component system in actinobacteria?
  JOURNAL   Trends Microbiol 14 (10), 444-449 (2006)
   PUBMED   16934981
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022113.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10647.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Streptomyces sp. SM10"
                     /db_xref="taxon:565556"
     Protein         1..620
                     /product="LpqB family beta-propeller domain-containing
                     protein"
                     /calculated_mol_wt=65603
     Region          13..620
                     /region_name="PRK13613"
                     /note="lipoprotein LpqB; Provisional"
                     /db_xref="CDD:237447"
ORIGIN      
        1 mdtdrrrggr gravrvsall acgavvlagc gampvtgdvk avdasqpgds qvqvyavppr
       61 egaapievvd gflesmtsdd pdfrttrkyl taqaarawqp gegttvlska pnrngptihg
      121 kerasettyt ltgeqvaavd aqssyrplap seysqmlhlv qekgadgkqe wridivpdgl
      181 vlgqsdfkrl yrsvnkyyfa agraddrsal vadpvyvrnr tdpvtrmdta tqtvrtlleg
      241 psnwlrpvvd srfpagtalk rgvtslapdd qnvlkvplnk radkagqgac rmmaaqvlft
      301 lrdltsarvg qvelqggqgp lcslgadeae efasdngseg pdsqyfvdek ghvqripgss
      361 kgsgepepvi gplgsgtvai gavgvardee qaaavsanrq hlyvssltee sepadpvvts
      421 raersadrls apswdgrgdl wvadrdpanp rllrlvggag epqevpvsgl dggrieglrm
      481 sadgvrvalr vskdghttlh igrverhgsg edeqvsvedl rqaapqladv tavswsgrsr
      541 lvvvgkeegg vqqvryvqad gstsssgvlp gvnqvttiaa adddqlplma dtegdgivkl
      601 spgdnwqtvl kkgsslvypg
//
LOCUS       WP_258036776             379 aa            linear   BCT 02-MAR-2025
DEFINITION  thioesterase domain-containing protein, partial [Mycobacterium
            marinum].
ACCESSION   WP_258036776
VERSION     WP_258036776.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium marinum
  ORGANISM  Mycobacterium marinum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            ulcerans group.
REFERENCE   1  (residues 1 to 379)
  AUTHORS   Schneider,A. and Marahiel,M.A.
  TITLE     Genetic evidence for a role of thioesterase domains, integrated in
            or associated with peptide synthetases, in non-ribosomal peptide
            biosynthesis in Bacillus subtilis
  JOURNAL   Arch Microbiol 169 (5), 404-410 (1998)
   PUBMED   9560421
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013166.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00975.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Mycobacterium marinum"
                     /db_xref="taxon:1781"
     Protein         <1..379
                     /product="thioesterase domain-containing protein"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <8..377
                     /region_name="entF"
                     /note="enterobactin non-ribosomal peptide synthetase EntF;
                     PRK10252"
                     /db_xref="CDD:236668"
ORIGIN      
        1 evrrwvgerl peymvpaavm vveglpltan gkldrralpa pqftstaayr gprdqreavl
       61 aglfaevlgv aqvgiddrff dlgghslsvt rlvarirael nvevpipavf naptvaelae
      121 wlsqgcesef vdpfamvlpi rlsgtrppiw cpsaafglsw syrglldhvd drpiyglqaw
      181 nfyhtaefta svrtmvndyl erildiqkeg pffllgwsfg gvvahaiaae lqnrgheval
      241 laliasapan entrvalses evasesgfhs aleawakerd enisvdspey klfaetlavm
      301 tkntieilnd fvspiyegpa vlfiptidek wsreqyleew sphlkgnvsa hyiegehagm
      361 dlpgpmamig rildqmlka
//
LOCUS       WP_258036817             994 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Mycobacterium
            marinum].
ACCESSION   WP_258036817
VERSION     WP_258036817.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium marinum
  ORGANISM  Mycobacterium marinum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            ulcerans group.
REFERENCE   1  (residues 1 to 994)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..994
                     /organism="Mycobacterium marinum"
                     /db_xref="taxon:1781"
     Protein         <1..>994
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..>992
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
ORIGIN      
        1 pdtpaeqtla aiyaqvlgld rvsvddsffd lggdslsamr vvsaaraagl acrtrdifrh
       61 qnvaalarvv eqigadvclg dddgvgsval tpimrwfdsv aslvaglhqt vlvqgpagvd
      121 qaavvvliqa lldrhamlrl qvardsaggw slqarppgcv darelmrqae vmsgellaga
      181 lsrldpaagv mvsavwvsst aqlllaihhl avdgvswrvl lddlntgwtq yqragavslp
      241 aagssfrqwa smlvdyahdp avtaqlaawr qiaavpavva apdrevdnaa saghlsvvld
      301 aattqalitk vpaafhagvh dilliafava wqefladpnv vigvdveghg rndelspgmd
      361 lsatvgwftt kypvalyagp iawpqfctgd tvvgvvvkdl keqlravpeg ltygllryqn
      421 hevdfaepdp piafnylgrf egfnrpggag gwhlsgaglm laetarvmad mplthtvaln
      481 avtidtdagp qlhaewtwas svfdrgalvk laglwfdala aisahvdagg ggltpadlpg
      541 lsltqsqidd lersypvkdl lpltplqqgl lfhsdaftag qayvvqigig lageldpvrl
      601 hdavqtattr npnlaarfay agldepvqii lddpvvpwdv idlgdgaqrd ieavsagqre
      661 alrdisnncp iraalvktap dqyrliltnh hvvcdgwsms illgevfthy gnrslptpvp
      721 yrehlvwlad qdrdtallaw relfsgfhtp tlvsaqdpge saqhavqslt lsdaatgaln
      781 elarshhstl nvvlqaafaq llawltghhd vafgttvsgr sadlagsesm vgllintvav
      841 rarltatttt telidqlqqf htdtleyhhl plgdihraag hprlfdtlfv yenypindlt
      901 alcpdqltit ditsfetthy pltvfvlpgp qlgfrveydm aafdktamds liarlqavlt
      961 vmaaepgrrl slidlldpne herlddwgnr aalt
//
LOCUS       WP_258036804              79 aa            linear   BCT 02-MAR-2025
DEFINITION  MaoC/PaaZ C-terminal domain-containing protein, partial
            [Mycobacterium marinum].
ACCESSION   WP_258036804
VERSION     WP_258036804.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium marinum
  ORGANISM  Mycobacterium marinum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            ulcerans group.
REFERENCE   1  (residues 1 to 79)
  AUTHORS   Fukui,T., Shiomi,N. and Doi,Y.
  TITLE     Expression and characterization of (R)-specific enoyl coenzyme A
            hydratase involved in polyhydroxyalkanoate biosynthesis by
            Aeromonas caviae
  JOURNAL   J Bacteriol 180 (3), 667-673 (1998)
   PUBMED   9457873
REFERENCE   2  (residues 1 to 79)
  AUTHORS   Steinebach,V., Benen,J.A., Bader,R., Postma,P.W., De Vries,S. and
            Duine,J.A.
  TITLE     Cloning of the maoA gene that encodes aromatic amine oxidase of
            Escherichia coli W3350 and characterization of the overexpressed
            enzyme
  JOURNAL   Eur J Biochem 237 (3), 584-591 (1996)
   PUBMED   8647101
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013722.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01575.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Mycobacterium marinum"
                     /db_xref="taxon:1781"
     Protein         <1..79
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
     Region          <1..75
                     /region_name="hot_dog"
                     /note="The hotdog fold was initially identified in the E.
                     coli FabA (beta-hydroxydecanoyl-acyl carrier protein
                     (ACP)-dehydratase) structure and subsequently in 4HBT
                     (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A
                     number of other seemingly unrelated...; cl00509"
                     /db_xref="CDD:469797"
     Site            order(4,7..8,11,21..23)
                     /site_type="active"
                     /note="active site 1 [active]"
                     /db_xref="CDD:239524"
ORIGIN      
        1 ctygvagral vaelgggvaa nitsidarft kpvfpgetlt tliwrtepgk avyrtvvagt
       61 dgsdarvvld dgaveyvqg
//
LOCUS       WP_258036837              30 aa            linear   BCT 02-MAR-2025
DEFINITION  acyltransferase domain-containing protein, partial [Mycobacterium
            marinum].
ACCESSION   WP_258036837
VERSION     WP_258036837.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium marinum
  ORGANISM  Mycobacterium marinum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            ulcerans group.
REFERENCE   1  (residues 1 to 30)
  AUTHORS   Serre,L., Verbree,E.C., Dauter,Z., Stuitje,A.R. and Derewenda,Z.S.
  TITLE     The Escherichia coli malonyl-CoA:acyl carrier protein transacylase
            at 1.5-A resolution. Crystal structure of a fatty acid synthase
            component
  JOURNAL   J Biol Chem 270 (22), 12961-12964 (1995)
   PUBMED   7768883
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012901.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00698.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..30
                     /organism="Mycobacterium marinum"
                     /db_xref="taxon:1781"
     Protein         1..>30
                     /product="acyltransferase domain-containing protein"
     Region          <2..>30
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
ORIGIN      
        1 mfvfpgqgsq yagmgaqlyr qhpvfttaid
//
LOCUS       WP_258036830             142 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Mycobacterium
            marinum].
ACCESSION   WP_258036830
VERSION     WP_258036830.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium marinum
  ORGANISM  Mycobacterium marinum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            ulcerans group.
REFERENCE   1  (residues 1 to 142)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Mycobacterium marinum"
                     /db_xref="taxon:1781"
     Protein         <1..>142
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <3..142
                     /region_name="PRK08155"
                     /note="acetolactate synthase large subunit; cl39075"
                     /db_xref="CDD:453955"
ORIGIN      
        1 ralraafpsp kahqdawrrr caqhrdrfsa rydapgqhiy apallkrlse lapadaviac
       61 dvgqhqmwva qhcrfnhprn hltsgalgtm gfglpaamga qfacpertvv lvsgdgsfmm
      121 nvqelatiar crlpvkivll dn
//
LOCUS       WP_258036853             334 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Streptomyces
            sp. SM14].
ACCESSION   WP_258036853
VERSION     WP_258036853.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM14
  ORGANISM  Streptomyces sp. SM14
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 334)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Streptomyces sp. SM14"
                     /db_xref="taxon:1736045"
     Protein         1..334
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=35328
     Region          2..303
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(5,7..8,10,29..31,71..73,112..114,143,147,170..173)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(91,114,143,147)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mvvtggagfl gshlcralla lgddvvcvdn lstgrtenia dltphprfaf veadvtepvt
       61 vpgevdlvlh lacaaspvdy frmpvatlrs gghgtyhllc lardkgarfv lastsevygd
      121 phvhpqhedy wgnvnpvgpr svydeskrfs eamtvafrke fglgtgiari fnsygpamrg
      181 ddgrvvptfi tralagrplp vmgdghqtrs lcyvddtvag llalaaseea gpvnigspde
      241 itvldlarrv veltgglstv efvenhpddp rrrkpdigra eavlgwrprv sladglgrtv
      301 ewfghapvpt ataapapaas psspivpasg garr
//
LOCUS       WP_258036881             203 aa            linear   BCT 02-MAR-2025
DEFINITION  trehalase-like domain-containing protein, partial [Streptomyces sp.
            SM14].
ACCESSION   WP_258036881
VERSION     WP_258036881.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM14
  ORGANISM  Streptomyces sp. SM14
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039283.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19291.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Streptomyces sp. SM14"
                     /db_xref="taxon:1736045"
     Protein         1..>203
                     /product="trehalase-like domain-containing protein"
     Region          17..>198
                     /region_name="SGA1"
                     /note="Glucoamylase (glucan-1,4-alpha-glucosidase), GH15
                     family [Carbohydrate transport and metabolism]; COG3387"
                     /db_xref="CDD:442614"
ORIGIN      
        1 mseicdttea vlappylpia ehgligdlrt aalvgtdgrv dwfcaprfds psvfgallda
       61 erggfwkiep rcevanrqqf yfpdtnilit rmltedgmve vqdfmpvlre hdaghrqrlv
      121 rrvvsvrghm rmrvevaprl dygrdrhrle rtptgvrfvg rslaltlhss igleeragdv
      181 tgtfrvaege svlfvlepei arg
//
LOCUS       WP_258036987            1662 aa            linear   BCT 02-MAR-2025
DEFINITION  HAMP domain-containing protein, partial [Streptomyces sp. SM14].
ACCESSION   WP_258036987
VERSION     WP_258036987.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM14
  ORGANISM  Streptomyces sp. SM14
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 1662)
  AUTHORS   Aravind,L. and Ponting,C.P.
  TITLE     The cytoplasmic helical linker domain of receptor histidine kinase
            and methyl-accepting proteins is common to many prokaryotic
            signalling proteins
  JOURNAL   FEMS Microbiol Lett 176 (1), 111-116 (1999)
   PUBMED   10418137
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012876.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00672.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..1662
                     /organism="Streptomyces sp. SM14"
                     /db_xref="taxon:1736045"
     Protein         1..>1662
                     /product="HAMP domain-containing protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          99..>441
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
     Region          289..333
                     /region_name="HAMP"
                     /note="Histidine kinase, Adenylyl cyclase,
                     Methyl-accepting protein, and Phosphatase (HAMP) domain;
                     cd06225"
                     /db_xref="CDD:381743"
     Region          462..>803
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
     Region          644..>1034
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
     Region          1023..1072
                     /region_name="HAMP"
                     /note="HAMP (Histidine kinases, Adenylyl cyclases, Methyl
                     binding proteins, Phosphatases) domain; smart00304"
                     /db_xref="CDD:197640"
     Region          1071..1247
                     /region_name="MsrC"
                     /note="GAF domain-containing protein, putative
                     methionine-R-sulfoxide reductase [Defense mechanisms,
                     Signal transduction mechanisms]; COG1956"
                     /db_xref="CDD:441559"
     Region          1226..1577
                     /region_name="BaeS"
                     /note="Signal transduction histidine kinase [Signal
                     transduction mechanisms]; COG0642"
                     /db_xref="CDD:440407"
ORIGIN      
        1 mdaaslnrll salvsmregn frrrltvagd gpmaeiaavy ndvadrnvhl tgqlsrvrrv
       61 vgregklter ldagacegaw akaiedandl vedlgrpvae vgrvlsavae gdleqrmdlr
      121 aqtdagtdrp lrgeflrvgr tvnglvdqls aftdevtrva levgtegnlg gqakmrgvsg
      181 swkdltdsln tmayrltaqv rdisrvttav ahgdltqkvt vhvagemlgl ketvntmvdq
      241 lssfqsevtr varevgtegq lggqarvdgv agvwkdltds vnlmagnlta qvreiaqvtt
      301 avangdlsqt itvtargeia qlaetinamt etlrtfadev trtaseigte gklggqayvq
      361 gvagtwkdlt dsvntafrdl taqvrdiatv ttavangdlt qkvtvdvage mlelkntvnt
      421 mvdqlssfqf evtrvareig degalgghas vhgvagawkd ltdsvntafr nltaqvrdia
      481 tvttavangd ltqkvvvdva gemldlkntv ntmvdqlssf adqvtqvate vgtegrlggq
      541 ahvdgvagvw kgltdsvnsm asnltgqvrg iaqvttavaq gdlsqkitvd argeilevkn
      601 tintmvdqls sfaeqvtrva levgtegrlg gqaqvpgvag vwrdltdsvn gmasnltdqv
      661 rgiaqvatav argdlsqkit vdargeilev kntintmvdn lssfaeevtr varevgtegr
      721 lggqaevrgv agtwkdltqs vngmannlta qvrsiaevtt avakgdltkk iivdaqgeil
      781 alvttvntmv dqlssfadqv trvarevgte gqlggqaqvr gvsgiwkdlt dnvnlmarnl
      841 tgqvrnisgv atavangdls kkvtveasge iaqladsvnt mvttlssfae qvtrvarevg
      901 tegrlggqan vpgvsgtwkd ltesvngman nltgqvrnia mvttaiargd ltkkmdidar
      961 geilelktti ntmvdqlssf aeqvtrvare vgtdgqlggq arvrdvagtw keltesvnem
     1021 agnltrqvrn iarvatavtr gdhsvkidae aageilvlqd nintmirnlr ettlankeqd
     1081 wlkgnlaris glmqgrrdlt dvanlimsel apavsaqhga fflaaptgrd sdvlagegvd
     1141 ggyelrliss ygyaagtmpt ifrpgeslig taaeqrraif yghtpegylk issglgeaqp
     1201 ahvvvlpvlf edtvlgvvel asfqpftqiq rdflgqmaem iatsvntiav ntrtevllsq
     1261 sreladqlek rsvelerqqk alqssnaelk dkadqlastn rdievknsai eqarqvleer
     1321 aeqlavsmqy kseflanmsh elrtplnsll ilaklladnt egnltakqve faetihgags
     1381 dllqlindil dlskveagkm dvsptrialv qlvdyveasv rpltaeknle fsvrvspelp
     1441 atlhtdeqrl lqvlrnllsn avkftetgsv elvirpagtg vpeeirqhml etgavldssa
     1501 plvafavtdt gigiapgkmr vifeafkqad gttsrkyggt glglsisrei arllggeida
     1561 asepgrgstf tlylplqpae lpppgygela agalaieaad raedrvaaeg paalpaleag
     1621 psagdagava gdqatdpged rasetpagde gnesercgeg er
//
LOCUS       WP_258037005             104 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: LuxR C-terminal-related transcriptional regulator
            [unclassified Streptomyces].
ACCESSION   WP_258037005
VERSION     WP_258037005.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..104
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=10820
     Region          <1..36
                     /region_name="HTH_CRP"
                     /note="helix_turn_helix, cAMP Regulatory protein
                     C-terminus; DNA binding domain of prokaryotic regulatory
                     proteins belonging to the catabolite activator protein
                     family; cl46859"
                     /db_xref="CDD:481199"
ORIGIN      
        1 maggltdaei aerlsitvgt vkthlgsaqt riaarnpwgg rlvglaprsg gagvterrrv
       61 alaagrrath pvasvsvrer argtgsswad grqadphrri rthp
//
LOCUS       WP_258037008             313 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: aldo/keto reductase [unclassified Streptomyces].
ACCESSION   WP_258037008
VERSION     WP_258037008.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 313)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 313)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..313
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=33690
     Region          1..290
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     Site            order(1,31,36,61,105,135..136,155,183..189,241,262..265,
                     270,273..274)
                     /site_type="active"
                     /db_xref="CDD:381296"
     Site            order(31,36,61,105)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381296"
ORIGIN      
        1 mgmsyaygpt dldearatle ralelgvnhf dtaelygdge nerflapfva ahreeivlas
       61 kcgivpdpdh pgsavadnrp eyirravdgs lrrlgtdtld lyylhrrdvr vpieesvgam
      121 gelvaagkvr hlglsevtge elraahavhp iaalqsewsl fsrdvertav paaaelgtaf
      181 vpysplgrgf ltgafaaadt dlpaedfrrn qprftgenag rngallavvr eiaaeqgvtp
      241 aqialawvha qaerhgltvv pipgtrnrrr ieenaaatrv aldesqltrl daladqvagd
      301 ryasmghtsa gre
//
LOCUS       WP_258037044            1114 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: nitrate- and nitrite sensing domain-containing
            protein [unclassified Streptomyces].
ACCESSION   WP_258037044
VERSION     WP_258037044.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 1114)
  AUTHORS   Shu,C.J., Ulrich,L.E. and Zhulin,I.B.
  TITLE     The NIT domain: a predicted nitrate-responsive module in bacterial
            sensory receptors
  JOURNAL   Trends Biochem Sci 28 (3), 121-124 (2003)
   PUBMED   12633990
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019974.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08376.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..1114
                     /product="nitrate- and nitrite sensing domain-containing
                     protein"
                     /calculated_mol_wt=117436
     Region          106..349
                     /region_name="NIT"
                     /note="Nitrate and nitrite sensing; pfam08376"
                     /db_xref="CDD:462453"
     Region          484..677
                     /region_name="KdpD"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; COG2205"
                     /db_xref="CDD:441807"
     Region          766..860
                     /region_name="SGP"
                     /note="Sulphur globule protein; pfam17228"
                     /db_xref="CDD:435798"
     Region          <823..1063
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
ORIGIN      
        1 mrrtpatspp adsgdgpsse rgnftppaas rppaggdgdg tatdtgsrla prnwrvatrl
       61 nailllpviv alvfaglrvq thyetwqaae raertaelvr astayanall derdltarpl
      121 lagdtedpvv eqarqdtdra rtefearaad apddeniarr larveqvapr latlrqvayt
      181 delpgvqtem ayveiqhpvm sfanelgltt gnlasygrsv ytislgqaat slqrsvgthl
      241 lvaddadeae taerqvtlss ylhlegiarn eyvsaagpge lelleramaa atgdgpdpvd
      301 emapalvtgd ldpqaladag itpdawftav tarfdayrdv erdlvdravd eaqsvsadar
      361 tnmitnsvlv vvlllaafai aalmaramsk smsrlrdaal gvaekrlpal vdqlsrndpg
      421 hvdtrvepir itsrdeigev srafdqvhre avrlaaeqal lrgnvnamft nlssrnqglv
      481 erqlgligel enneaepdql enlfqldhla trmrrngenl lvlageepgr rwnqpvplvd
      541 vvraaaseve yydrvdivgi ppgeihgavv tdlvhllael lenatsfssp htkvrvtatr
      601 lpdgrvmvei hdkgvglsad dfalinhrla dppvadvevs rrmglfvvgr lslrhgirvq
      661 lrpsgeqvgt tslvmlpesi thggggdhtp eeeftvsriv pespygseag daaagrtaae
      721 lgfddsrygd ggaaldpvrr slrrgerrvp vdpavagdrp rqtpvggpvg stghqrqtgh
      781 aaghghgygv gqghhdqgqn gpvyggsgyg adtgyggypd sggpapgtda gytypaqaap
      841 gygnhgadpa gqpgagepma gyappgyped grttadpttg sgapgrhgda glahdgaadl
      901 gaspphgaqg tysgqeyggs gvgpdqayga pggrahprpq rdgatakdan ttpgqqwdra
      961 daypatppga ahrvgfhgag sgpegqtptt gaglprrepq rrpdgevarp gqrtpaetpv
     1021 hapseeergr gprreaqptg ttssglprrv pkanlaehkp aeppvggtqv srapedvrgr
     1081 ltnlhrgvrq grgastgrte ndyegygpgn dqer
//
LOCUS       WP_258037145             127 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: TadE/TadG family type IV pilus assembly protein
            [Streptomyces].
ACCESSION   WP_258037145
VERSION     WP_258037145.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
REFERENCE   1  (residues 1 to 127)
  AUTHORS   Kachlany,S.C., Planet,P.J., DeSalle,R., Fine,D.H. and Figurski,D.H.
  TITLE     Genes for tight adherence of Actinobacillus actinomycetemcomitans:
            from plaque to plague to pond scum
  JOURNAL   Trends Microbiol 9 (9), 429-437 (2001)
   PUBMED   11553455
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019428.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07811.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..127
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /calculated_mol_wt=12847
ORIGIN      
        1 msavevvlla pmmiffilll vafgqqvagr savdgaarda aragslersg aaanaaasrv
       61 ardqladict dvdvfrasgs dtshapgtiy svsvrceirg lkllgvpagp svtgtsaspi
      121 dpyrrsg
//
LOCUS       WP_258037160             604 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: VWA domain-containing protein [unclassified
            Streptomyces].
ACCESSION   WP_258037160
VERSION     WP_258037160.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024909.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13519.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..604
                     /product="VWA domain-containing protein"
                     /calculated_mol_wt=62147
     Region          <1..174
                     /region_name="ChlD"
                     /note="vWFA (von Willebrand factor type A) domain of Mg
                     and Co chelatases [Coenzyme transport and metabolism];
                     COG1240"
                     /db_xref="CDD:440853"
     Region          <120..604
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
ORIGIN      
        1 mvldasgsma eddgsgatrm eaaqaalgta vdalpdgypt glrlfgaens dctdtalaqp
       61 vepldrqalk dalgevgptg ntptglalek aagdlpevpp gaigrqtill vsdgesncgd
      121 lppcevarel vgdgvrlrid tvgfrigdeg reeleciaea ghgtyydapd gealgreler
      181 aallsadgyr fdgtetegga tadaaptlep gqyldtigpg dthwyaveld avsaadlsvt
      241 avphpgvrva rrdglklrlv dssdnhrqcd sqdvtfgsde gamiladgvs ripsadggat
      301 cdesgryllt vtresdpdsd qarwpvelrh aveeplpdgt rpaasatgyg eagqaaelpt
      361 aqpeditggt gfndatalep gvyrdrllpa qtrwfkvpvg wgqqlryrve fgneptledr
      421 sgssyvrttg ytpqrepigr geftaertyr geplavdmgt vpvtwtnrye sagsaapvrv
      481 ggdyyiavsl gpdtveiarn aavgvvlrvd vfgeelagpe hgapalaaee nadgnggggs
      541 gesgdvgdds vsaadsasgq gagwsgplla alagsggvll itavvvavtr lrrggsgsgp
      601 gtta
//
LOCUS       WP_258037147             620 aa            linear   BCT 02-MAR-2025
DEFINITION  GTPase [Streptomyces sp. SM14].
ACCESSION   WP_258037147
VERSION     WP_258037147.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM14
  ORGANISM  Streptomyces sp. SM14
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 620)
  AUTHORS   Shields,M.J., Fischer,J.J. and Wieden,H.J.
  TITLE     Toward understanding the function of the universally conserved
            GTPase HflX from Escherichia coli: a kinetic approach
  JOURNAL   Biochemistry 48 (45), 10793-10802 (2009)
   PUBMED   19824612
REFERENCE   2  (residues 1 to 620)
  AUTHORS   Dutta,D., Bandyopadhyay,K., Datta,A.B., Sardesai,A.A. and
            Parrack,P.
  TITLE     Properties of HflX, an enigmatic protein from Escherichia coli
  JOURNAL   J Bacteriol 191 (7), 2307-2314 (2009)
   PUBMED   19181811
REFERENCE   3  (residues 1 to 620)
  AUTHORS   Jain,N., Dhimole,N., Khan,A.R., De,D., Tomar,S.K., Sajish,M.,
            Dutta,D., Parrack,P. and Prakash,B.
  TITLE     E. coli HflX interacts with 50S ribosomal subunits in presence of
            nucleotides
  JOURNAL   Biochem Biophys Res Commun 379 (2), 201-205 (2009)
   PUBMED   19109926
REFERENCE   4  (residues 1 to 620)
  AUTHORS   Bassler,J., Kallas,M. and Hurt,E.
  TITLE     The NUG1 GTPase reveals and N-terminal RNA-binding domain that is
            essential for association with 60 S pre-ribosomal particles
  JOURNAL   J Biol Chem 281 (34), 24737-24744 (2006)
   PUBMED   16803892
REFERENCE   5  (residues 1 to 620)
  AUTHORS   Vernet,C., Ribouchon,M.T., Chimini,G. and Pontarotti,P.
  TITLE     Structure and evolution of a member of a new subfamily of
            GTP-binding proteins mapping to the human MHC class I region
  JOURNAL   Mamm Genome 5 (2), 100-105 (1994)
   PUBMED   8180467
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014036.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01926.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Streptomyces sp. SM14"
                     /db_xref="taxon:1736045"
     Protein         1..620
                     /product="GTPase"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
                     /calculated_mol_wt=66285
     Region          <32..558
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          130..288
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            133..140
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(135..141,211,267..268,270,275..277)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            161
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            165..167
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            208..211
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(210..211,231..232)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            267..270
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            275..277
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
ORIGIN      
        1 mpeetttapq peraadawdd gviarrarpg etppperrgq pyadvygeel vpeaepvisv
       61 papartspvh teneppsaad qdlavrlaal relvglsrtr ldasslveag rlldeaeart
      121 rlprtyttva iagatgsgks tlfnamagaq lsesgvrrpt tatavsctwe agrssradgl
      181 lerlgipsrs rrrahvvdpg lhglvlldlp dydsvaeshr eqvdrllalv daviwvvdpe
      241 kyadavlher ylrafaghae vtivvlnqid rlptdaaeai mddlrrllde rgialgehge
      301 pgagvlsvsa ltgdgvpelr rtvgelvasr taaarrlaad vdgvtrrlrp vcvadnvqap
      361 tgltprsree feerlahavg apaagraaer gwsrrserac gtpwaqltkr ladrrasrrg
      421 eppglsargg rlgeppvvsr pviaeavrtv aaeaatelpt pwaqavrdaa wrgaerlpda
      481 leealaarpg lgpeaavrpg parpawwtva iigqallvta qllgmcwllt aafgypvasg
      541 wlpvtllvgg slgapllawv criasrgpar awgqreeerl rriaarcgrs lvlepvaael
      601 lryrevreqf vaaaggldtr
//
LOCUS       WP_258037185             557 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6087 family protein [Streptomyces sp. SM14].
ACCESSION   WP_258037185
VERSION     WP_258037185.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM14
  ORGANISM  Streptomyces sp. SM14
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 557)
  AUTHORS   Yanai,K., Murakami,T. and Bibb,M.
  TITLE     Amplification of the entire kanamycin biosynthetic gene cluster
            during empirical strain improvement of Streptomyces kanamyceticus
  JOURNAL   Proc Natl Acad Sci U S A 103 (25), 9661-9666 (2006)
   PUBMED   16766657
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2006 Aug 22;103(34):12951]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040316.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19565.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Streptomyces sp. SM14"
                     /db_xref="taxon:1736045"
     Protein         1..557
                     /product="DUF6087 family protein"
                     /calculated_mol_wt=59925
     Region          <340..>553
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
ORIGIN      
        1 masrtsnphl alwiaatgls hgeiarrvaa eaicrgqrqi tpdatrvrrw idgerprppv
       61 ptllaavlse tvgqpltpgd lgltaagavl ntiqvpllte aaaqtlagwt rmdlfmdrre
      121 tlklavgapl ilaaermlgg tarslnrahq gfdtdtvtal eevtafftra datkggglyr
      181 saivaqlaev arriqdgvpa glrarvfaat adlaalagwv shdcgryata qrywsygiya
      241 agetgqrdrg veivtrmshq miylgrprda lgllevaaak adrpaakalv asqtgrvhaa
      301 lgdehqaqth ldtagdllae glgevpawva yfdaaehaga vpsppatslh savptvpras
      361 tsttrwsfgp lastasaswt asgwlprcst rerssgpqrp rsklwtpppv strrswfpds
      421 tpcwtppalt vsprskrsgh grktlpqsgr qrsrpetigi mgkhrrpgpl nqpsratphv
      481 dpaapftpye krrrppmdqy rrdrplhgga ghlrpheprt leewdgfgyt pagtapdlat
      541 aqvwvrelei gtvdgee
//
LOCUS       WP_258037251             178 aa            linear   BCT 02-MAR-2025
DEFINITION  putative immunity protein [Streptomyces sp. SM14].
ACCESSION   WP_258037251
VERSION     WP_258037251.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM14
  ORGANISM  Streptomyces sp. SM14
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF044575.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21805.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Streptomyces sp. SM14"
                     /db_xref="taxon:1736045"
     Protein         1..178
                     /product="putative immunity protein"
                     /calculated_mol_wt=18427
ORIGIN      
        1 mvnraseipl stqdlravtg yaaesaqevl elferahpad srprraidaa wtfarggdrg
       61 kplrdtawaa hraageagat aagdaaraam caaaaaylhp ladahqvkhi lgaaahaara
      121 aelaagdcrg faghregarr ragpvvvevl crypeaprgg grvgelvrdl daalrggr
//
LOCUS       WP_258037271            1144 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphodiester glycosidase family protein [Streptomyces sp. SM14].
ACCESSION   WP_258037271
VERSION     WP_258037271.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM14
  ORGANISM  Streptomyces sp. SM14
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 1144)
  AUTHORS   Das,D., Lee,W.S., Grant,J.C., Chiu,H.J., Farr,C.L., Vance,J.,
            Klock,H.E., Knuth,M.W., Miller,M.D., Elsliger,M.A., Deacon,A.M.,
            Godzik,A., Lesley,S.A., Kornfeld,S. and Wilson,I.A.
  TITLE     Structure and function of the DUF2233 domain in bacteria and in the
            human mannose 6-phosphate uncovering enzyme
  JOURNAL   J Biol Chem 288 (23), 16789-16799 (2013)
   PUBMED   23572527
REFERENCE   2  (residues 1 to 1144)
  AUTHORS   Kang,C., Riazuddin,S., Mundorff,J., Krasnewich,D., Friedman,P.,
            Mullikin,J.C. and Drayna,D.
  TITLE     Mutations in the lysosomal enzyme-targeting pathway and persistent
            stuttering
  JOURNAL   N Engl J Med 362 (8), 677-685 (2010)
   PUBMED   20147709
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021507.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09992.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Streptomyces sp. SM14"
                     /db_xref="taxon:1736045"
     Protein         1..1144
                     /product="phosphodiester glycosidase family protein"
                     /calculated_mol_wt=119187
     Region          133..404
                     /region_name="NAGPA"
                     /note="Sugar-P-sugar glycosidase (uncovering enzyme, UCE),
                     NAGPA superfamily [Carbohydrate transport and metabolism];
                     COG4632"
                     /db_xref="CDD:443670"
     Region          781..998
                     /region_name="CpdA"
                     /note="3',5'-cyclic AMP phosphodiesterase CpdA [Signal
                     transduction mechanisms]; COG1409"
                     /db_xref="CDD:441019"
ORIGIN      
        1 mtgspqpwrr trgayalata galaaltvgl ippaaadppt aagvidgdgm evstsdhpvs
       61 pgvelsttqr lesdkwldvq alsvdlgedv qvdylatadv adaatiadla aahdpgdgrt
      121 tvaainsdff dinatnapla pgvrdgelvq sgslnrttvv gidadgtgri ldihfegelt
      181 tpdgpaelts ynaasvpang igvytgqwgd adrllpvlgs qqvtevvven gevtsvsekp
      241 grgrvpeeat vllgreegat alaglqagdp veleygartg dggelprtaa ggngmlvvdg
      301 epqnwenrpn nataprtavg fsedgtemyv ltvdgrqahs ggvtltelav mmdrmgayta
      361 lnldgggstt llarepgtaa pslvnkpsdg vervvpngla ftapapggaa tgfavapeah
      421 pelaphgevm gvarpdrvfs gltrqltala hdatfgpare taprwrsgaa angtvdssgl
      481 ftagrpggie vtahagparg sveltvldel vrleptrlrv gladgtdtga fallghdaag
      541 ysapvdpgdi tleyddtlfd iapdpaaagf tvsaltddfa sgtitatvge vttvlsasvg
      601 yeeravsdfe dagawtfsha raggslftep egqegaalgv rydfgastgt raayvtpagg
      661 diavpgqpqs fslwirgdgq gawpslhltd atgtgqvlrt dhidhigwre vtfevpdgfr
      721 ypasvhrfyv aetrpdvqyt geiavdqlva htppdvelps egprvdplit teesaagrdw
      781 rfalvsdaqf varapesdva raarrtlrda rdsapdfvvi ngdwvdegsp adlefaremi
      841 eeelgdlpwy yvpgnhevmg gsigqweavf gdrqltfdhr gtrfvtldts slsisgggyr
      901 qwqelraqld aaatddsiss vviashvppr dttaqpasql tdrmdamlle rwlsdfraet
      961 gkgvahlgsh vgifdsyrmn gvpylingns gkgpaapper ggfsgwstvg vdqlserdqr
     1021 eargaphlag pewisvqtrp hvdgltldap gslavgrsap arasvrqala ddgaeiqvpa
     1081 typvsadwag saalhigdpa ganrrhvaaf dpatgtltal rqgkisltvt vngesatadv
     1141 rltr
//
LOCUS       WP_258037304             438 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: M14 family metallopeptidase [unclassified
            Streptomyces].
ACCESSION   WP_258037304
VERSION     WP_258037304.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 438)
  AUTHORS   Makarova,K.S. and Grishin,N.V.
  TITLE     The Zn-peptidase superfamily: functional convergence after
            evolutionary divergence
  JOURNAL   J Mol Biol 292 (1), 11-17 (1999)
   PUBMED   10493853
REFERENCE   2  (residues 1 to 438)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10133673
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..438
                     /product="M14 family metallopeptidase"
                     /EC_number="3.4.17.-"
                     /GO_function="GO:0004181 - metallocarboxypeptidase
                     activity [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=47305
     Region          115..415
                     /region_name="M14_CPT"
                     /note="Peptidase M14 Carboxypeptidase T subfamily;
                     cd03859"
                     /db_xref="CDD:349432"
     Site            order(178,181,238,255..256,313..314,320,364,386)
                     /site_type="active"
                     /db_xref="CDD:349432"
     Site            order(178,181,313)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:349432"
ORIGIN      
        1 mrspkrrrnt taavllslal avplgaqala apgpddrpda ptvdapaars yevlgistqg
       61 qrtaltahga aidavddhsv tvtadratae tlrglgyhlt epvaaaagna iasapseyts
      121 yaeametiea aatqypdlvs tevigtsheg rdivavkvss eaavdrdkpe vlfthnmhgr
      181 ehlttemaly tlaeltsgyg tdtrvtelld erelwiipiv npdgkahdmd sgqfrmwrkn
      241 repdsgssai gtdlnrnfah qwgccggsst npgsetyrgh gpesaketqv iadfvrgrvv
      301 dgeqqitahi dfhtyselil wpygytyddt apgltqddrd afaavgeama dsngyrpqqs
      361 sdlyvtdgsv ndwmwadqgi fsytfemypr sasgggfypp gsvidretsr nreavlilme
      421 nadcmyrsig keseycaa
//
LOCUS       WP_258037366              89 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6507 family protein, partial [Streptomyces sp. SM14].
ACCESSION   WP_258037366
VERSION     WP_258037366.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM14
  ORGANISM  Streptomyces sp. SM14
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040449.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20117.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Streptomyces sp. SM14"
                     /db_xref="taxon:1736045"
     Protein         1..>89
                     /product="DUF6507 family protein"
     Region          2..>89
                     /region_name="DUF6507"
                     /note="Family of unknown function (DUF6507); pfam20117"
                     /db_xref="CDD:466292"
ORIGIN      
        1 mrwdigaagv agvlaklqpd qdaltedaaa crntlalats aagglhdgrg sgplstalse
       61 laeraaycla dlegraisca egarqatda
//
LOCUS       WP_258037363             262 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Streptomyces sp. SM14].
ACCESSION   WP_258037363
VERSION     WP_258037363.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM14
  ORGANISM  Streptomyces sp. SM14
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Streptomyces sp. SM14"
                     /db_xref="taxon:1736045"
     Protein         <1..>262
                     /product="DUF6531 domain-containing protein"
     Region          <1..>31
                     /region_name="ABC_6TM_exporters"
                     /note="Six-transmembrane helical domain of the ATP-binding
                     cassette transporters; cl38913"
                     /db_xref="CDD:365789"
     Region          95..167
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
ORIGIN      
        1 avlgvvvmii ggplawvvla aalivladtl idyangnasl wdvgfamldc ipgfkgltsl
       61 aglaggvkky vtnfknmksm yqqegirgig kvligdpidi atgemtlrnt dltlpgilpl
      121 tierehlsdy rygrwfgrsw astfdqrlvl dqfgadyyad dgmrlhypip kpeygapvep
      181 vsgprwglsw dgagggamti hqresgrtlh fapvpgrrgs elpivaitdr nnnridfhyt
      241 pdgdpselvh sggyrvgiav yd
//
LOCUS       WP_258037387             521 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase family 18 protein [Streptomyces sp. SM14].
ACCESSION   WP_258037387
VERSION     WP_258037387.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM14
  ORGANISM  Streptomyces sp. SM14
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 521)
  AUTHORS   Perrakis,A., Tews,I., Dauter,Z., Oppenheim,A.B., Chet,I.,
            Wilson,K.S. and Vorgias,C.E.
  TITLE     Crystal structure of a bacterial chitinase at 2.3 A resolution
  JOURNAL   Structure 2 (12), 1169-1180 (1994)
   PUBMED   7704527
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00704.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Streptomyces sp. SM14"
                     /db_xref="taxon:1736045"
     Protein         1..521
                     /product="glycosyl hydrolase family 18 protein"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=54867
     Region          16..113
                     /region_name="CBM_2"
                     /note="Cellulose binding domain; pfam00553"
                     /db_xref="CDD:425748"
     Region          146..519
                     /region_name="ChiA"
                     /note="Chitinase, GH18 family [Carbohydrate transport and
                     metabolism]; COG3325"
                     /db_xref="CDD:442554"
ORIGIN      
        1 mtalvvlasp aqaatatasf skvsqwdtgf ggqwtvtntg tstingwtve wefpsgtsts
       61 tvwdgvltrs gnhysvtntg wngtlapgat asfgftgsgt geptgcrvng vscdgggdpt
      121 npdptnpdpt npdptdpdpt dptdpgpgep gdhvitgyft ewgvydrnyh arnivtsgsa
      181 skithinysf gnvqngrctm gdsyaatdra ytaaesvdgv adtwdqplrg nfnqlkklke
      241 myphiqivws fggwtwsggf teamqnpqaf aqscfdlvnd prwdgvfdgi dldweypngc
      301 glscdssgpq ifrtmmqtfk gvfgdqlvta aitadassgg kidavdyagg aqyadlihvm
      361 tydffgafaa qgptaphspl tsypgipqqd fnsadaiakl kaqgvpshkl tlgigfygrg
      421 wtgvtqsapg gsatgaapgt yeagiedykv laqrcpatgt vggtayahcg nqwwsydtpq
      481 tirakmdwak qqglggamfw elsgdtsdgv linaidqgln g
//
LOCUS       WP_258037450             247 aa            linear   BCT 02-MAR-2025
DEFINITION  MMPL family transporter, partial [Mycobacterium marinum].
ACCESSION   WP_258037450
VERSION     WP_258037450.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium marinum
  ORGANISM  Mycobacterium marinum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            ulcerans group.
REFERENCE   1  (residues 1 to 247)
  AUTHORS   Tekaia,F., Gordon,S.V., Garnier,T., Brosch,R., Barrell,B.G. and
            Cole,S.T.
  TITLE     Analysis of the proteome of Mycobacterium tuberculosis in silico
  JOURNAL   Tuber Lung Dis 79 (6), 329-342 (1999)
   PUBMED   10694977
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015155.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03176.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Mycobacterium marinum"
                     /db_xref="taxon:1781"
     Protein         1..>247
                     /product="MMPL family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
     Region          4..>247
                     /region_name="actII"
                     /note="Transport protein; TIGR00833"
                     /db_xref="CDD:129913"
ORIGIN      
        1 mirrlalpii avwialival gvavpslevv gemravsssp tdapsiiaan kinalftehk
       61 adsaimlvle gkeplgedah ayyddlvrkf radkehvvgv rdywsdpvte agaessdgkf
      121 ayvqvnlmgl qgharsirsv kavqrivdst papdgvttfv tgsaalmvdq qtvgsrsmrl
      181 velvtigviv vmllviygsv ttalvvlvmv vlqlaaargv vallgyhglv glsifstnvl
      241 vtlviaa
//
LOCUS       WP_258037404             685 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Mycobacterium marinum].
ACCESSION   WP_258037404
VERSION     WP_258037404.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium marinum
  ORGANISM  Mycobacterium marinum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            ulcerans group.
REFERENCE   1  (residues 1 to 685)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 685)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 685)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 685)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Mycobacterium marinum"
                     /db_xref="taxon:1781"
     Protein         <1..685
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          45..121
                     /region_name="FHA_Rv1747-like_rpt2"
                     /note="second forkhead associated (FHA) domain found in
                     Mycobacterium tuberculosis ABC transporter
                     ATP-binding/permease protein Rv1747 and similar proteins;
                     cd22737"
                     /db_xref="CDD:439356"
     Site            order(54..55,69..70,72,89,91..92)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439356"
     Region          111..684
                     /region_name="3a01204"
                     /note="The Eye Pigment Precursor Transporter (EPP) Family
                     protein; TIGR00955"
                     /db_xref="CDD:273361"
     Region          138..359
                     /region_name="CcmA"
                     /note="ABC-type multidrug transport system, ATPase
                     component [Defense mechanisms]; COG1131"
                     /db_xref="CDD:440746"
ORIGIN      
        1 ppsnfppppp rpgpqppqqa tkppevanla tkmfhallpr sggaerpags vtigratdnd
       61 ivipdvlasr hhafltltpl gteirdahsv ngtfvngvrv gsavlsdgdv vtignvdlvf
      121 tggtlirrte aatrsgglev ksvcftvdgg kqlldhislt arpgtltaii ggsgagkttl
      181 srliagytsp ssgtvtfegh nihaeyasmr srigmvpqdd vvhrqltvsq algyaaelrl
      241 ppdtskedra qvvaqvleel eltkhaetrv dklsggqrkr asvalelltg psllildept
      301 tgldpaldrq vmlmlrqlad agrvvlivth svayldvcdq lllvapggkt aflgppseis
      361 qamgtanwad iftnvgadpd eanrrfleqk qeqpafpsea spavdlgepv htdvlhqfst
      421 varrqirlvi sdrgytvfla llpfligtlt ltvrgktgyg msdpmgnnpa qpdqilvmln
      481 vgavfmgtal tirdligerp ifrreqavgl staaymgaki vvfcafavtq aaiattisvv
      541 gwgkplsdav llgdvrfelf vtvaatcvas allgmalssl aqsqdqimpm lvvsimsqlv
      601 fsggmiwvtn rflldqlswl tparwgfaas astidthrlv pgptdpkdqh wdhkasawlf
      661 dmamlavlsi aytaivwwki rlkrr
//
LOCUS       WP_258037460             105 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Bacillus
            thuringiensis].
ACCESSION   WP_258037460
VERSION     WP_258037460.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 105)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         1..>105
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..>105
                     /region_name="EntF"
                     /note="seryl-AMP synthase component of non-ribosomal
                     peptide synthetase [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG1020"
                     /db_xref="CDD:440643"
ORIGIN      
        1 msfeycsdlf kessihqmme hyvqilrgii qnpeqkivei nvvsevekek ilggfndttv
       61 rnpkdmtvit rfeeqvrrvp dkiavraagr eityrelnek anqla
//
LOCUS       WP_258037461             178 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase, partial [Bacillus thuringiensis].
ACCESSION   WP_258037461
VERSION     WP_258037461.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 178)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         1..>178
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
     Region          9..>157
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
ORIGIN      
        1 meqnqtvtln illtsdihgt vypihyqdns paelglakis tlikkersqn tnvllidngd
       61 fiqgtpftyh yvtyeknkkn pmsllanylq ydaaiignhe fnygmdilnn avttanfpyl
      121 sanildknik kpyfgkpyii kqiesnikia ilgvtthahq lkrtnkmkfl snqlqtvq
//
LOCUS       WP_258037508             380 aa            linear   BCT 02-MAR-2025
DEFINITION  thioesterase domain-containing protein [Mycobacterium marinum].
ACCESSION   WP_258037508
VERSION     WP_258037508.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium marinum
  ORGANISM  Mycobacterium marinum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            ulcerans group.
REFERENCE   1  (residues 1 to 380)
  AUTHORS   Schneider,A. and Marahiel,M.A.
  TITLE     Genetic evidence for a role of thioesterase domains, integrated in
            or associated with peptide synthetases, in non-ribosomal peptide
            biosynthesis in Bacillus subtilis
  JOURNAL   Arch Microbiol 169 (5), 404-410 (1998)
   PUBMED   9560421
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013166.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00975.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Mycobacterium marinum"
                     /db_xref="taxon:1781"
     Protein         1..380
                     /product="thioesterase domain-containing protein"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=41073
     Region          <1..380
                     /region_name="entF"
                     /note="enterobactin non-ribosomal peptide synthetase EntF;
                     PRK10252"
                     /db_xref="CDD:236668"
ORIGIN      
        1 maqalpaymv paavvvvdsl pltvngkldi ralpapqyga tgsyrapasp veevlagiya
       61 qvlgldrvav dqsffdlggn silamrvssa iekflgvdlp vrlmfeaptv eslsrqvesp
      121 yssvelapve llkqgagtpl fclppgggls wiyrnlgayl dcpiigiqqv psdqevepgs
      181 vgdmarryvd miqahhpdgp ynllgwsmgg vvaheiavel rrrgcevgrl ivldaagevd
      241 sadsvaepas esdvlelilv aagidiaehp rpltyqqaea llnqrtpvef slpprrivev
      301 mldnmnanqs mrlkhvpdvf dgdmivfsak rdsggrslad swrhyvagdi teypidcthe
      361 amlnieslql faeriaiylr
//
LOCUS       WP_258037510             225 aa            linear   BCT 02-MAR-2025
DEFINITION  MMPL family transporter, partial [Mycobacterium marinum].
ACCESSION   WP_258037510
VERSION     WP_258037510.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium marinum
  ORGANISM  Mycobacterium marinum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            ulcerans group.
REFERENCE   1  (residues 1 to 225)
  AUTHORS   Tekaia,F., Gordon,S.V., Garnier,T., Brosch,R., Barrell,B.G. and
            Cole,S.T.
  TITLE     Analysis of the proteome of Mycobacterium tuberculosis in silico
  JOURNAL   Tuber Lung Dis 79 (6), 329-342 (1999)
   PUBMED   10694977
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015155.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03176.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Mycobacterium marinum"
                     /db_xref="taxon:1781"
     Protein         1..>225
                     /product="MMPL family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
     Region          2..>225
                     /region_name="actII"
                     /note="Transport protein; TIGR00833"
                     /db_xref="CDD:129913"
ORIGIN      
        1 malpiiavwi aviaalnifv pqldtvgrvr svslspgdap gviaiqriga mfhehhtdsv
       61 amlllesaep ldvragkyyk elvaklkadt rhvqyvqdlw sdpltapgae sndgrsvyaq
      121 vylngtqgea lanesvaavq galrdmpgpd gvnafltgpa vvladqqiag drsmrlillv
      181 tfavivvmll viygsvttal vvlvmvvlql aaargvvall gyhgl
//
LOCUS       WP_258037520             191 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Mycobacterium
            marinum].
ACCESSION   WP_258037520
VERSION     WP_258037520.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium marinum
  ORGANISM  Mycobacterium marinum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            ulcerans group.
REFERENCE   1  (residues 1 to 191)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Mycobacterium marinum"
                     /db_xref="taxon:1781"
     Protein         <1..>191
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <4..>191
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 atpeevasle adeqrsgfdl ergltmrfll velpnerwrf vitahhivid gwslavfvne
       61 lfalyragga idvlaapprp frdylgwlgg wdsqsgeqfw rdylaglsap tmlsralagg
      121 qggqvaeepq rielclgaev tarlvdgars rgvtvnslvq vawalvlgal tgrddvvfgi
      181 avsgrpsela g
//
LOCUS       WP_258037511             754 aa            linear   BCT 02-MAR-2025
DEFINITION  acyltransferase domain-containing protein, partial [Mycobacterium
            marinum].
ACCESSION   WP_258037511
VERSION     WP_258037511.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium marinum
  ORGANISM  Mycobacterium marinum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            ulcerans group.
REFERENCE   1  (residues 1 to 754)
  AUTHORS   Serre,L., Verbree,E.C., Dauter,Z., Stuitje,A.R. and Derewenda,Z.S.
  TITLE     The Escherichia coli malonyl-CoA:acyl carrier protein transacylase
            at 1.5-A resolution. Crystal structure of a fatty acid synthase
            component
  JOURNAL   J Biol Chem 270 (22), 12961-12964 (1995)
   PUBMED   7768883
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012901.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00698.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Mycobacterium marinum"
                     /db_xref="taxon:1781"
     Protein         1..>754
                     /product="acyltransferase domain-containing protein"
     Region          <1..754
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
ORIGIN      
        1 mgaqlyrqhp vfttaidevc aavdkhldvp lrevmftepe llqqtiyaqp alfafgvamh
       61 avltqagvnp dyllghsvge ltaahvagvf sleeaavlvc argrlmqsct pgammaisas
      121 epavaamlen hpevviaavn gptsvavagp aeqlnalheh cnnnnhkvtl lrvshafhsp
      181 amdpiltefe tianrlsyrp hsvpiisnlt gslatveqlt sprywaqhvr epvrfydgvt
      241 gllaggeqaf velsphpvla aaitdtltgv tdrvgsavvt tlrrdrpdmd mvanaianlh
      301 vhghspswqk iypgattvel ptypfqhrry wpdpapradv gaagldqpeh pllaavtela
      361 dqdqivlsgr lstsvhrwla ghqlgdtavl patalidmal yagehtgcpt idelvlqtpl
      421 tltpdaatdl qisvaapdeq nrrtfsvhar tsehphqhst wvlhasgtls napsttpptk
      481 plpgpqaitk vnqesfydql aqhglhysea frsiqgigkd plnpdvicae valpadieth
      541 gygihpalld aalhpltaal adtntnsgpq lpfaiagitl hatgasrmhv qleptatdtf
      601 rlsatdpvga pvitidsltv rslpdtdltq ppthkaqqgi feltwpalpa etfpatgvlp
      661 pwalisphpe nlspdlnqsp typnltalpt cpplviwdlt tpqppqsdll hhvhtltqht
      721 laglqnwlnr sdtlqahlvv ltrhavttsp hdla
//
LOCUS       WP_258037525             109 aa            linear   BCT 02-MAR-2025
DEFINITION  acyltransferase domain-containing protein, partial [Mycobacterium
            marinum].
ACCESSION   WP_258037525
VERSION     WP_258037525.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium marinum
  ORGANISM  Mycobacterium marinum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            ulcerans group.
REFERENCE   1  (residues 1 to 109)
  AUTHORS   Serre,L., Verbree,E.C., Dauter,Z., Stuitje,A.R. and Derewenda,Z.S.
  TITLE     The Escherichia coli malonyl-CoA:acyl carrier protein transacylase
            at 1.5-A resolution. Crystal structure of a fatty acid synthase
            component
  JOURNAL   J Biol Chem 270 (22), 12961-12964 (1995)
   PUBMED   7768883
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012901.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00698.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Mycobacterium marinum"
                     /db_xref="taxon:1781"
     Protein         1..>109
                     /product="acyltransferase domain-containing protein"
     Region          <1..104
                     /region_name="Acyl_transf_1"
                     /note="Acyl transferase domain; cl08282"
                     /db_xref="CDD:471802"
ORIGIN      
        1 mdpiltefet ianrlsyrph svpiisnltg slatveqlts prywaqhvre pvrfhdgvtg
       61 llaggeqvfv elsphpvlas altdaladtg qltqsavvtt lrrdrpdmd
//
LOCUS       WP_258037572             263 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Bacillus thuringiensis].
ACCESSION   WP_258037572
VERSION     WP_258037572.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 263)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         1..>263
                     /product="AMP-binding protein"
     Region          1..>240
                     /region_name="PRK08308"
                     /note="acyl-CoA synthetase; Validated"
                     /db_xref="CDD:236231"
ORIGIN      
        1 mlivnkqeys ksdfelrlqv yeemeqfkea egnrfalclk dpfdiitivf flkekkssvl
       61 lihedtpket aiemakranc vgvlygeygn ftklevgnfl leepsllqys sgttgepkli
      121 rrawtevdte itaynealnc evdevpivma pvshsyglic gtlsaikrgs qpviitnknp
      181 kfalnivrnt ekhiiyavpl mlhimgsfpl gtfqfhkimt sgsplpealf yklkemttym
      241 rffpklveil kicpycsyyl seg
//
LOCUS       WP_258037578              72 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA translocase FtsK [Bacillus thuringiensis].
ACCESSION   WP_258037578
VERSION     WP_258037578.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 72)
  AUTHORS   Sivanathan,V., Allen,M.D., de Bekker,C., Baker,R.,
            Arciszewska,L.K., Freund,S.M., Bycroft,M., Lowe,J. and
            Sherratt,D.J.
  TITLE     The FtsK gamma domain directs oriented DNA translocation by
            interacting with KOPS
  JOURNAL   Nat Struct Mol Biol 13 (11), 965-972 (2006)
   PUBMED   17057717
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020952.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09397.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         1..72
                     /product="DNA translocase FtsK"
                     /calculated_mol_wt=8223
     Region          14..71
                     /region_name="FtsK_gamma"
                     /note="Ftsk gamma domain; pfam09397"
                     /db_xref="CDD:462786"
ORIGIN      
        1 mrmevninev ierlyepake fvienqiarv sslqrkfrig ymtaakimdr leengivgpy
       61 agsqprkvlv qk
//
LOCUS       WP_258037590             194 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein, partial [Bacillus
            thuringiensis].
ACCESSION   WP_258037590
VERSION     WP_258037590.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024139.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12728.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         1..>194
                     /product="helix-turn-helix domain-containing protein"
     Region          9..>76
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(10..12,26,45..47)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133378"
ORIGIN      
        1 mqfdkrekln tkeaakqlni aestlhkyvk delikpvydd wkqdgsrlfy vddierlaea
       61 ikkpkgitis elakmvgktk tyiqkhiklg nlsaekivyr gkqtflidsv eakkfiekvs
      121 vgsgskhfin idgkdyflyq llesrvtnnt ariidieigk vltdcnevkd legvtrpkke
      181 nctlrnifti ikcc
//
LOCUS       WP_258037627             108 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase domain-containing protein, partial [Bacillus
            thuringiensis].
ACCESSION   WP_258037627
VERSION     WP_258037627.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 108)
  AUTHORS   Xiong,Y. and Eickbush,T.H.
  TITLE     Origin and evolution of retroelements based upon their reverse
            transcriptase sequences
  JOURNAL   EMBO J 9 (10), 3353-3362 (1990)
   PUBMED   1698615
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00078.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         <1..>108
                     /product="reverse transcriptase domain-containing protein"
     Region          <1..108
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            33
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:238185"
ORIGIN      
        1 llekiakrvq dpqvmhlvkq vikaagkigv pqggpfspla aniylnevdw tfdairrkta
       61 egnyeavnyh rfaddiviav sghssksgwa elalrrlweq lkplgvel
//
LOCUS       WP_258037618             129 aa            linear   BCT 02-MAR-2025
DEFINITION  replication protein P, partial [Haemophilus influenzae].
ACCESSION   WP_258037618
VERSION     WP_258037618.1
KEYWORDS    RefSeq.
SOURCE      Haemophilus influenzae
  ORGANISM  Haemophilus influenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (residues 1 to 129)
  AUTHORS   Mallory,J.B., Alfano,C. and McMacken,R.
  TITLE     Host virus interactions in the initiation of bacteriophage lambda
            DNA replication. Recruitment of Escherichia coli DnaB helicase by
            lambda P replication protein
  JOURNAL   J Biol Chem 265 (22), 13297-13307 (1990)
   PUBMED   2165499
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018671.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06992.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Haemophilus influenzae"
                     /db_xref="taxon:727"
     Protein         1..>129
                     /product="replication protein P"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
     Region          25..>115
                     /region_name="Phage_lambda_P"
                     /note="Replication protein P; pfam06992"
                     /db_xref="CDD:462061"
ORIGIN      
        1 mensitqdqi ntlpperaqr aeetinwlfq elksifpgwr aafeteadyl sakktwlrvl
       61 vrekitrpql englyeaens ldkflpsvgl fvfwckaydy halglpneae lyqryntflg
      121 yarfnrdef
//
LOCUS       WP_258037624              92 aa            linear   BCT 02-MAR-2025
DEFINITION  EF-Tu/IF-2/RF-3 family GTPase, partial [Haemophilus influenzae].
ACCESSION   WP_258037624
VERSION     WP_258037624.1
KEYWORDS    RefSeq.
SOURCE      Haemophilus influenzae
  ORGANISM  Haemophilus influenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (residues 1 to 92)
  AUTHORS   Nissen,P., Kjeldgaard,M., Thirup,S., Polekhina,G., Reshetnikova,L.,
            Clark,B.F. and Nyborg,J.
  TITLE     Crystal structure of the ternary complex of Phe-tRNAPhe, EF-Tu, and
            a GTP analog
  JOURNAL   Science 270 (5241), 1464-1472 (1995)
   PUBMED   7491491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03144.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Haemophilus influenzae"
                     /db_xref="taxon:727"
     Protein         <1..>92
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          <1..>92
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 rgsalqalng vaeweekile laghldtyip eperaidqpf llpiedvfsi sgrgtvvtgr
       61 vergiirtgd eveivgikdt akttvtgvem fr
//
LOCUS       WP_258037722             291 aa            linear   BCT 02-MAR-2025
DEFINITION  thioesterase domain-containing protein, partial [Streptomyces sp.
            SM5].
ACCESSION   WP_258037722
VERSION     WP_258037722.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM5
  ORGANISM  Streptomyces sp. SM5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 291)
  AUTHORS   Schneider,A. and Marahiel,M.A.
  TITLE     Genetic evidence for a role of thioesterase domains, integrated in
            or associated with peptide synthetases, in non-ribosomal peptide
            biosynthesis in Bacillus subtilis
  JOURNAL   Arch Microbiol 169 (5), 404-410 (1998)
   PUBMED   9560421
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013166.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00975.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Streptomyces sp. SM5"
                     /db_xref="taxon:402233"
     Protein         <1..>291
                     /product="thioesterase domain-containing protein"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <2..278
                     /region_name="EntF2"
                     /note="Thioesterase domain of type I polyketide synthase
                     or non-ribosomal peptide synthetase [Secondary metabolites
                     biosynthesis, transport and catabolism]; COG3319"
                     /db_xref="CDD:442548"
ORIGIN      
        1 tgtvgpyral vqelsgrlpv aglvvddlda ylggdpgtlv aaladryagv lldqgltrvh
       61 lvgycmggll atelagrlgr aggevggvsv issyrvpylv eddllaeyvf armmradtva
      121 lgyprdeaat ralvtaatrr hgdrvpqgal terpptalgp agtgalrafr slaarpqker
      181 lraigtylpq esaelraper lerafrtvkh slaavaahqa tpytgattlv rqrgeaeifp
      241 smhhdmrayw qrvcgdglrv advpgdhftc vrpphaasrr gqrpsspstc g
//
LOCUS       WP_258037504             330 aa            linear   BCT 02-MAR-2025
DEFINITION  EspA/EspE family type VII secretion system effector [Mycobacterium
            marinum].
ACCESSION   WP_258037504
VERSION     WP_258037504.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium marinum
  ORGANISM  Mycobacterium marinum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            ulcerans group.
REFERENCE   1  (residues 1 to 330)
  AUTHORS   Sala,C., Odermatt,N.T., Soler-Arnedo,P., Gulen,M.F., von
            Schultz,S., Benjak,A. and Cole,S.T.
  TITLE     EspL is essential for virulence and stabilizes EspE, EspF and EspH
            levels in Mycobacterium tuberculosis
  JOURNAL   PLoS Pathog 14 (12), e1007491 (2018)
   PUBMED   30571761
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 330)
  AUTHORS   Chen,J.M., Zhang,M., Rybniker,J., Basterra,L., Dhar,N.,
            Tischler,A.D., Pojer,F. and Cole,S.T.
  TITLE     Phenotypic profiling of Mycobacterium tuberculosis EspA point
            mutants reveals that blockage of ESAT-6 and CFP-10 secretion in
            vitro does not always correlate with attenuation of virulence
  JOURNAL   J Bacteriol 195 (24), 5421-5430 (2013)
   PUBMED   24078612
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039175.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18879.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Mycobacterium marinum"
                     /db_xref="taxon:1781"
     Protein         1..330
                     /product="EspA/EspE family type VII secretion system
                     effector"
                     /calculated_mol_wt=33888
     Region          65..148
                     /region_name="EspA_EspE"
                     /note="EspA/EspE family; pfam18879"
                     /db_xref="CDD:465897"
ORIGIN      
        1 mqpatvrvvk emqdlsqqvl delnaaqanp paaeeeltds flskhrgsvv clgtdgilgg
       61 llawlghefp dqgdrldssg smfdgviaqi aalgpdsgwq gsaaraygar nlaqsqhtgl
      121 madldrlaae lvsaqaddvh kvrstlwalv aivsvllvvc iglelqgpeg qlasfysalp
      181 icgtalfvaa valtflavtt srnasavqaa tqrltalvaa lttgpdavpg spemptppky
      241 clsefdlaed tgptppqlpd lgsaftdlpg apefhlatgt gaglpdfgap qlpipaltgl
      301 ptlpgptnlt dltsvlaglp tiaqlrtcll
//
LOCUS       WP_258037734             450 aa            linear   BCT 02-MAR-2025
DEFINITION  lipid II flippase MurJ, partial [Streptomyces sp. SM5].
ACCESSION   WP_258037734
VERSION     WP_258037734.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM5
  ORGANISM  Streptomyces sp. SM5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 450)
  AUTHORS   Kuk,A.C., Mashalidis,E.H. and Lee,S.Y.
  TITLE     Crystal structure of the MOP flippase MurJ in an inward-facing
            conformation
  JOURNAL   Nat Struct Mol Biol 24 (2), 171-176 (2017)
   PUBMED   28024149
REFERENCE   2  (residues 1 to 450)
  AUTHORS   Mohamed,Y.F. and Valvano,M.A.
  TITLE     A Burkholderia cenocepacia MurJ (MviN) homolog is essential for
            cell wall peptidoglycan synthesis and bacterial viability
  JOURNAL   Glycobiology 24 (6), 564-576 (2014)
   PUBMED   24688094
REFERENCE   3  (residues 1 to 450)
  AUTHORS   Ruiz,N.
  TITLE     Bioinformatics identification of MurJ (MviN) as the peptidoglycan
            lipid II flippase in Escherichia coli
  JOURNAL   Proc Natl Acad Sci U S A 105 (40), 15553-15557 (2008)
   PUBMED   18832143
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015013.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03023.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Streptomyces sp. SM5"
                     /db_xref="taxon:402233"
     Protein         1..>450
                     /product="lipid II flippase MurJ"
     Region          31..449
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 metaaaapgp ptpevrgrpf laraaagaag ltvvaallgl vrdqavarlf gaghasdafl
       61 vawtvpemaa tlliedgmal llvpafslal trrasaaspg dpvralvadt fprlaaalac
      121 agalliagap wvvgvlapgl edpglavdct rltavtvltf gvtgyfsaal rahgrflgpa
      181 gvyiaynagi igmtlalhav wgvraaaagv avgsvlmilt llpgfvtlvl rrrvrgtpap
      241 agrdtaapll gaavlapvvl fvvsrqsqvf verflassls dgaishlnfa qkvaqlpmvl
      301 smmictvtfp vvaramasgd regarrrver dlalagtvvl lgtamvlgya pqivevlfqr
      361 gafdaadtta tagvmrvyal gllghtlvga lcrpyfssgr ptwyppaamg agllvtagag
      421 aaltgrfgvd giaaanalgi staavlmlvg
//
LOCUS       WP_258037765             426 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ricin-type beta-trefoil lectin domain protein
            [Streptomyces].
ACCESSION   WP_258037765
VERSION     WP_258037765.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012859.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00652.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..426
                     /product="ricin-type beta-trefoil lectin domain protein"
                     /calculated_mol_wt=46924
     Region          2..>66
                     /region_name="PIG-L"
                     /note="GlcNAc-PI de-N-acetylase; cl00929"
                     /db_xref="CDD:445182"
     Region          276..>353
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cl49609"
                     /db_xref="CDD:483949"
     Site            order(289..291,301,303,310..311)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(332..333,339,341,348,350)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
ORIGIN      
        1 mahpdddlyf idpeihetvr agcpvttvyl tagddgkrpl raaldyvarr eagvraayav
       61 iagvpdrwte rtvqvdgrgi rsltldaspa pvhlvffglh dglpegqgad smlklftgtr
      121 rsipffesee tvtggqlvsa lstlarqeka qriltldhdn asfafglsgr vdhsdhgiga
      181 ryfrqagyvv gipvssylgy tmsslgpnlp qnrvppkeas irrylahaec rsrecdatgr
      241 yegplpsdas kwvhrqyqqv hrdprpgeil adigrttays grnpeqclea vraeaedgav
      301 rlngcdgaaq qkwdirddgt irsqhfhghc ltlvkagvgl arcspadaeq rwarkpwqst
      361 twkrtawria gakdrclyqd drhlpprwds redrtprlal ircdaqtqpg vfwnlhgsgp
      421 saspgg
//
LOCUS       WP_258037842             145 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase, partial [Streptomyces sp. SM5].
ACCESSION   WP_258037842
VERSION     WP_258037842.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM5
  ORGANISM  Streptomyces sp. SM5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024917.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13527.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Streptomyces sp. SM5"
                     /db_xref="taxon:402233"
     Protein         1..>145
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
     Region          1..>145
                     /region_name="PRK01346"
                     /note="enhanced intracellular survival protein Eis"
                     /db_xref="CDD:234945"
ORIGIN      
        1 mntelripsv adwdawlgcl elafggvplt pesremyatl srpdrslghw dgeecvgtag
       61 aypfrvtvpg gaavpaagvt mvsvaathrr qglltsmmrr qlddvrswge piavlkasep
      121 aiygrfgyga atpetalrid tdrvr
//
LOCUS       WP_258037890             279 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: methyltransferase domain-containing protein
            [Streptomyces].
ACCESSION   WP_258037890
VERSION     WP_258037890.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025033.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13649.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..279
                     /product="methyltransferase domain-containing protein"
                     /calculated_mol_wt=29803
     Region          <2..255
                     /region_name="methyltr_grsp"
                     /note="methyltransferase, ATP-grasp peptide maturase
                     system; TIGR04188"
                     /db_xref="CDD:275041"
ORIGIN      
        1 mdlrpgqrvl dvgtgagvta saacfvcgde gvvtldidph vtaaarerls algyrpatvt
       61 gdgttgwaaa gpydrifvsf avryvpqalv eqlapggral mtlgtsspsw pglavierrr
      121 dgsveaqlra vefghragag fdrlflsaaf raeiatadgw kqrsmlappp dtargmwlal
      181 dhlypglvrh fgaedltiga pqcrswmrvr avgyrrwdvt tsgprdiwae iphvadrwra
      241 agapgafrlh fdaddgqrat spngaltwkl spgktgdar
//
LOCUS       WP_258037924             288 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: alpha/beta fold hydrolase [Streptomyces].
ACCESSION   WP_258037924
VERSION     WP_258037924.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
REFERENCE   1  (residues 1 to 288)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..288
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=31588
     Region          4..282
                     /region_name="biphenyl_bphD"
                     /note="2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate
                     hydrolase; TIGR03343"
                     /db_xref="CDD:132386"
ORIGIN      
        1 mtelthastr relpteqgvl ryheagdgpp llllhgsgpg vtgwrnyrdn latfaahfrc
       61 lvlefpgfgv sdpadghpmv tagsavtrfl dglglrqvdv ignsmggivg trfalahpdr
      121 vrrlvtiggi grnlfspgpg eginllteft dapsreklvr wlnsmvhdrs lvteelieer
      181 weqatdpdtl aaarrmygse afaartaaaa asdeapywat lhrlrtktll twgrddrvsp
      241 ldmsilpmrt ipdaelhvfp dcghwvmier kaawesavla fltrrdaa
//
LOCUS       WP_258037967            2590 aa            linear   BCT 02-MAR-2025
DEFINITION  ricin-type beta-trefoil lectin domain protein [Streptomyces sp.
            SM5].
ACCESSION   WP_258037967
VERSION     WP_258037967.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM5
  ORGANISM  Streptomyces sp. SM5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012859.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00652.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2590
                     /organism="Streptomyces sp. SM5"
                     /db_xref="taxon:402233"
     Protein         1..2590
                     /product="ricin-type beta-trefoil lectin domain protein"
                     /calculated_mol_wt=274956
     Region          634..1403
                     /region_name="RhsA"
                     /note="Uncharacterized conserved protein RhaS, contains 28
                     RHS repeats [General function prediction only]; COG3209"
                     /db_xref="CDD:442442"
     Region          1043..2079
                     /region_name="RhsA"
                     /note="Uncharacterized conserved protein RhaS, contains 28
                     RHS repeats [General function prediction only]; COG3209"
                     /db_xref="CDD:442442"
     Region          1776..1898
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cd00161"
                     /db_xref="CDD:467293"
     Site            order(1780..1782,1793,1795,1802..1803)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(1830,1842,1844,1851..1852)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(1872..1874,1885,1887,1895..1896)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Region          1996..2077
                     /region_name="Rhs_assc_core"
                     /note="RHS repeat-associated core domain; TIGR03696"
                     /db_xref="CDD:274730"
     Region          2322..2461
                     /region_name="PT-HINT"
                     /note="Pretoxin HINT domain; pfam07591"
                     /db_xref="CDD:400120"
ORIGIN      
        1 mavivsltsa ltwggltlea aaippkprqd mavelpelpe sarteqdesa ekhlttapee
       61 attpytpqav eawspgvgta dltdvepgqs ipvenvptvs lgvpeesdpa alagewtvdl
      121 kapedsqaae vdgllmeitp patadpeaev tigvdytsfa dlygpqaadr fgvvllpncv
      181 vdaptegeca pepaeepdge eaaamlplas eievihpkts artlsaasne getlrtrrvv
      241 sasvpvaell gtdaasdvsg attmsltaas adtapravgv ldtgasaagd ftatplqssg
      301 swaagsssga ftygyqvqvp eapggltpqv alsyssqsvd grtsstnnqa swigdgwdyn
      361 agsitrtyas credakkaga nnsghktgdl cwgsdnatlt lggattelvw dadqkewfta
      421 ngdgsriqiv kdtskdnkda dgeywivttt dgtkyhfgln hlpgwskgdp vtnsvltvpv
      481 fgnhsgepcy kagdwknsdc aqgwrwnldy vedvhgnams lwwkkdvnyy arnfnwkapv
      541 kydrdgylah idygqrsntl fsaeapgrvt fnveercyae gslacteanf tskdpgkyri
      601 wydtpadlrc asgkmcwnaa psfwstkrld siktsaqrrt dttarqvvdr yqlkqsfpsl
      661 rtgpntalwl etvtrtgyar kgstdesvtl npvrfepnvd dmpnrvmrgd kdprpgfsrl
      721 rigrvineyg getaitykkp tgqcatgldl pgksdkaalk sntrlcypsf whpdpekedi
      781 dwfqkyvvqe veelpnvdga yststkytyg taawklaqqe ftkkstrtys qfagfdqvav
      841 ftgaddkaig skrtkavtrf frgmgdtvav kdvtgahiay drepfagria eelsyaeptd
      901 adtawltrsv tvpeatelas rvrgdgldal kawrvteprq layskdsdgv vhtsetktty
      961 eathglpvqi etledkadpg lvgdvsctkl eyvhhtdkni igltkqvlgs atpcatavft
     1021 dlkklasgsr taydggdyga alsgstrgla tqtwslkadg sgfqsdgtvg fdslgrvvka
     1081 tdpdgksstt aydtrngqtf gvteanslgh satqeiepgr gtatkstdan ghvtqsvfdp
     1141 lgrlvqawap grtpsasavp dfaaeyhist idpddpdrlp pyvvtksrgh rdrvetsvti
     1201 ydglgrerqa qeqatgggrl itdtlynssg evwqtnnayl atgkpsgqlf tpladtavpn
     1261 atrytydgsg rvvkelpiln gsemaarstr yeygadwstv inpsgaasyr vrsdsmgrtt
     1321 qvdtftdaar taytsvkyef ddlgrlvkay saqnaartwt waydgrgrli satdpdagtt
     1381 tttydhrdrp vtttnargvt vwtgydqlsr pveqrldsst gdllarstyd sapggkglpa
     1441 ssvrvtdgqe ytmsvggyta dyqprsttla lpdslattwg lrksytstyn ysdtgllldg
     1501 tipaagafds eklvvrynee glplsvsgkd wygseamysp ygqllrstlg aqphrvwsla
     1561 gfddasgalt dqqvyreqng dtslvggkla shrsywydda gnvtgirers tgiqerqcfs
     1621 ydpigqltea wtsadlghcv dgpvkddgtl nvtagpddsg ywqryeydll gnrkkltekd
     1681 ltgatakdtv ttyaygkadg sqphtltkvt kkyttpagaq vtaeaerlye ltgetkqvts
     1741 lgngdtqdis wtwdgqverl tgegsggrts yvgladkcld lnggktaent pvnlyacnga
     1801 ssqkwsfrve pgqsdpdlgt mafyddawcv apgsasagsa lqlhrcdgsa dqkikrnasg
     1861 qlvhvatglc iavkdgatad stptvltacs assaaqkwea qnetryiygp dgsplltlqg
     1921 kqatlhlset evttqaagkl vstqrsygap ggsvlryqyg yqktstlaae vgdhqgstya
     1981 eiamtdgmpv rvrkqdpfgn ergaatsgaa lrtragflga spddasgytq lgarmydpvv
     2041 grflsadpvl dladpmqang ysyahnnpvt lsdptglavs lnasetaaal agaglslaql
     2101 aqaksdsgrs lssvvlsaaw stlkdfigin dalacfggdm wscgsliiga ipwtklgkip
     2161 svlkavnrti naiqawrsak kkaeavlaaa kaaqqralaa kkaaiekakk aaqaakkkaa
     2221 ekkqttsnka vnqtkktgsp vqkqaqaksa pkvssasath kssgsgakas tskpggssgg
     2281 ssrsnggssg sggsgksges ggsgrsgesg gtcnsfvpgt kvvmadgstk aikdvkvgdk
     2341 vlatdpetgk ttvetvtaei kgeglkhlvk vtvdtdgdqg detasvtatd ghpfwveald
     2401 awidatdlqa gewlrtstgt yvqitaverw tattsavhnl tvsdlhtyyv vagatpilvh
     2461 ncgeadddll dfadealsms pesrpnvatk itsadgkhvr fayatdtrsg amppqtarav
     2521 ansghhggcg evgcaiqfes agiplegatf qsvkiggggr gnsfpiedhg eliapcpacq
     2581 rflpqiggrg
//
LOCUS       WP_258037969             176 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: transposase [unclassified Streptomyces].
ACCESSION   WP_258037969
VERSION     WP_258037969.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024751.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13358.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..176
                     /product="transposase"
                     /calculated_mol_wt=20389
     Region          <73..150
                     /region_name="transpos_IS630"
                     /note="IS630 family transposase; NF033545"
                     /db_xref="CDD:468076"
ORIGIN      
        1 mmpphaktws qrgrtpvvrv rgrsrrrlsi aaltcyepgh rsrliyrprr ddgnrdgrks
       61 fswrdywdll iaahqqldgs ivlvwdnlnv hkaaglrefa esrdrltiyy lppyapdlnp
      121 vegiwsllrr gwlsnvafst pehlvqtvrr glrhiqyrsh lidgcltetg ltirpv
//
LOCUS       WP_258038005             431 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GDSL-type esterase/lipase family protein
            [Streptomyces].
ACCESSION   WP_258038005
VERSION     WP_258038005.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
REFERENCE   1  (residues 1 to 431)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 431)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..431
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=45472
     Region          38..168
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cl22861"
                     /db_xref="CDD:473984"
     Region          222..416
                     /region_name="TesA"
                     /note="Lysophospholipase L1 or related esterase. Includes
                     spore coat protein LipC/YcsK [Cell cycle control, cell
                     division, chromosome partitioning, Lipid transport and
                     metabolism]; COG2755"
                     /db_xref="CDD:442045"
ORIGIN      
        1 mrrrsmllaa gaaaltgpla ghafaasrsg plvdhgtavd ldgggqvdls pqvgavaplt
       61 tgtilvtfrt tshhdamtli sasdpstpss nltlnlsgga lqfsvrqrga vlvnvmtrtr
      121 yddgrqhtva vtvdgagtrl haggqvvfet asrpffgsvs gltaltlgan rdsdhpsgew
      181 fftgtveraa vwdrvldage lvaqcprpvv adhgristil nsdtpatwvf tgdsithgaq
      241 htngwrsype hwtervrwel gkpknrdfvi dsgvsgatsa dltasfgerv tafspkvvsi
      301 migtndiats glgletyran lvslvgsvra lpgspvpvlq apnpvdpakw pgrvalsgya
      361 rvmgevaaqq nvvfvdhydd wltgnggqvp lsllndglhp nerghhrial kmieelqifd
      421 sgsrvctlsi p
//
LOCUS       WP_258038067             953 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: AAA domain-containing protein [unclassified
            Streptomyces].
ACCESSION   WP_258038067
VERSION     WP_258038067.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024486.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13086.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..953
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..953
                     /product="AAA domain-containing protein"
                     /GO_function="GO:0004386 - helicase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=104728
     Region          9..>188
                     /region_name="AAA_11"
                     /note="AAA domain; pfam13086"
                     /db_xref="CDD:404072"
     Region          <102..702
                     /region_name="DNA2"
                     /note="Superfamily I DNA and/or RNA helicase [Replication,
                     recombination and repair]; COG1112"
                     /db_xref="CDD:440729"
     Region          <764..890
                     /region_name="Cls"
                     /note="Phosphatidylserine/phosphatidylglycerophosphate/car
                     diolipin synthase [Lipid transport and metabolism];
                     COG1502"
                     /db_xref="CDD:441111"
ORIGIN      
        1 mpaglfpeqq daylaclgtg vrlvwgppgt gktmvltlai sdliaagkrv llvsatniav
       61 dnalkgvlrg hrhnsgeivr vgppqlkeia ddphvslplm vrarladveg rraqvsadll
      121 girsraedla eleaglvrfd aeayvqardm vaepfgdaas rdqrvselkk aarevgqsla
      181 aaeqdltral kdrddaadsr hlwkqvdall deadgvehaa taaesaalqn qerlretqrt
      241 lrevenrtgl aklrsraert eaqaacgdag vqfreahhha lkardiadrr raqiavraee
      301 mtraipfsdt eidrrdkaar aaaarhrtlt rslgefrtal ataedeagra hlaetliata
      361 egqgwparhr kaaalrpvva seaarkgsle erykqiqeey erlardaqge iinnarlvat
      421 tlarfrtnrh vfsghydvvl idevgaaslp evllavshaq qaavllgdfm qlgpvvprvl
      481 kdkrrpdiqr wlvpdvfqhc gitdpaaaqt hpacttlvtq nrfgravmgl vnglayggvl
      541 qagpvvpssr spedpeivli dtdglhelah vhltgpskgw wpagplisra lidlhggdge
      601 ttgvvtpygd qaeatlealr dverdggpsa evgtahrfqg refpivvfdt vegehsrplw
      661 makasrapea sdwmrsgirl fnvamtrvqt rvyviasatr iqevarkapd spfgqldali
      721 gssgvrvlpa kslitppeln vprgefgdrl aevlsrhvev sdvddettfy asfvaairsa
      781 rtslwlwtpw varrvrmilp elraavdrgv rvtvfvrdps dqlqkkpanl slvedlravv
      841 htvvpmhvmh qkivvvdekt vmlgslnals qswtrevmvt mrgayfarki lthehaevfa
      901 rppkcprcgq ddieirrgak enwywrcyns rcptgggnka wkkdielwhr prg
//
LOCUS       WP_258038072             671 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: FG-GAP-like repeat-containing protein [unclassified
            Streptomyces].
ACCESSION   WP_258038072
VERSION     WP_258038072.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13517.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..671
                     /product="FG-GAP-like repeat-containing protein"
                     /calculated_mol_wt=73035
     Region          132..201
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          190..258
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          249..316
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          305..374
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          459..619
                     /region_name="PI-PLCc_GDPD_SF"
                     /note="Catalytic domain of phosphoinositide-specific
                     phospholipase C-like phosphodiesterases superfamily;
                     cl14615"
                     /db_xref="CDD:472694"
ORIGIN      
        1 mkrlsgivsa avvcallvlq sgtgsasaaa dgapspavss gapwpevssl ptddndggtr
       61 taavraggtg prhdyngdgr sdmvawydya dghdamhtfs atpdggfsap lvgwetakgn
      121 fwaehmkrvt gdfngdgtgd vaafygyddg rvslftwlgn gdgtfatyfs swavapgnwt
      181 fdaitaqagd fngdgrddia awydyrngdd klftfladan ggfaapfssf qrpaadgwev
      241 grmkfatgdy dgdgradigv ldsytsgtvr lmvftgrpdg gfnepvrgae lsgwqfdrvs
      301 vysgdfdgng rdefaawydy adghdaligf dldadgkfgn rrellnavdg wysryrmdiv
      361 tgdyngdgrd dlatlygysd grvktitfta kpdgtlgdal hswevpagkw tftrahmver
      421 ynsplplcpt vfghggyptg pdawerdqvr qpnhpkglaq qkswgasgve adlrltkngt
      481 kgvmwhnlst rgltgtkadv rdiwwatgad qlkgrtidhg pftgetvytf rewldsakkq
      541 qmaafvelkg enelsllnad asireaawke viapiseraa tqkimiytlh dklrpelvkr
      601 ieaaglgatl tnhprwidap tvrweepapa asghyatwqe kmdqyaspvt svpmvttwtk
      661 dftswldrrc r
//
LOCUS       WP_258038118             134 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase domain-containing protein, partial [Bacillus
            thuringiensis].
ACCESSION   WP_258038118
VERSION     WP_258038118.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 134)
  AUTHORS   Xiong,Y. and Eickbush,T.H.
  TITLE     Origin and evolution of retroelements based upon their reverse
            transcriptase sequences
  JOURNAL   EMBO J 9 (10), 3353-3362 (1990)
   PUBMED   1698615
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00078.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         <1..134
                     /product="reverse transcriptase domain-containing protein"
     Region          3..>127
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            order(37..42,87..88,124,126..127)
                     /site_type="active"
                     /db_xref="CDD:238185"
     Site            order(37..42,87,126)
                     /site_type="other"
                     /note="NTP binding site [chemical binding]"
                     /db_xref="CDD:238185"
     Site            88
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:238185"
ORIGIN      
        1 igivphdsay ayipnrdclk aiqchqrnks nwflkmdlek ffnncseqvi tiqlkklypf
       61 slmtetdyks fisslcglac henelpqgtp lspiltnwlm isidtqinna lakrsgesfi
      121 ytryaddcap rkca
//
LOCUS       WP_258038125             106 aa            linear   BCT 02-MAR-2025
DEFINITION  YopX family protein, partial [Listeria monocytogenes].
ACCESSION   WP_258038125
VERSION     WP_258038125.1
KEYWORDS    RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021182.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09643.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Listeria monocytogenes"
                     /db_xref="taxon:1639"
     Protein         1..>106
                     /product="YopX family protein"
     Region          4..>106
                     /region_name="YopX"
                     /note="YopX protein; cl09859"
                     /db_xref="CDD:447838"
ORIGIN      
        1 mreiefrgkr idngewvygn lmqfedsatf ifaderkgas tltyahfiin nmhaidektl
       61 gscigreded ektifendiv qvvlehwpmg yyqeveyigv vkydtd
//
LOCUS       WP_258038148             258 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing
            protein, partial [Streptomyces sp. FM008].
ACCESSION   WP_258038148
VERSION     WP_258038148.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. FM008
  ORGANISM  Streptomyces sp. FM008
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 258)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02737.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Streptomyces sp. FM008"
                     /db_xref="taxon:1983802"
     Protein         1..>258
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /GO_function="GO:0070403 - NAD+ binding [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
     Region          2..>258
                     /region_name="PRK08268"
                     /note="3-hydroxy-acyl-CoA dehydrogenase; Validated"
                     /db_xref="CDD:236211"
ORIGIN      
        1 mrirvvgagv mgrgiaqwav taghtvelgd arresvdeav afvrqmldra agkgrlgrae
       61 addaarrlvp ldapdapgdg velvieavle dlavktelfr rleevlpata vlatntsslp
      121 vtriaaglre perliglhff npvplmkvae vipgartrpg laeelaktvr asghaavtva
      181 dtpgflinha grglvteala lleeraapve avdriardvl glrmgpfelm dltgldvtsk
      241 vidtiwegfr yserlrps
//
LOCUS       WP_258038174             331 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: helix-turn-helix domain-containing protein [Cobetia].
ACCESSION   WP_258038174
VERSION     WP_258038174.1
KEYWORDS    RefSeq.
SOURCE      Cobetia
  ORGANISM  Cobetia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Cobetia"
                     /db_xref="taxon:204286"
     Protein         1..331
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=37822
     Region          29..329
                     /region_name="PRK10130"
                     /note="HTH-type transcriptional regulator EutR"
                     /db_xref="CDD:182258"
ORIGIN      
        1 mhedvsrmdd sdatwqhgif ehapgkctre awdvneqahn ltdwaqhydq ygqgafygri
       61 delhlpgmqv fkeytsqald qqchvwpdsl wigipaerqp cringyalet gdimcqpggh
      121 dfelttpdtf aihclvlrrd wllevagesa ltllegdpqh tmrlgvtqgt rrgvtflmdr
      181 likrqgpgfe vqvhqgilsl avaaileewt pltdrypsyh hrrqvvervr ehmnrgepap
      241 vsieslcria hvsqrtlhns ftsilglspm qfirfnrlnq vrrrlcdpls tstigqiasd
      301 wgfyhlgqfa rdyrrlfges psstqaryra g
//
LOCUS       WP_258038220             361 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: AAA family ATPase [Cobetia].
ACCESSION   WP_258038220
VERSION     WP_258038220.1
KEYWORDS    RefSeq.
SOURCE      Cobetia
  ORGANISM  Cobetia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae.
REFERENCE   1  (residues 1 to 361)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 361)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019348.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07728.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Cobetia"
                     /db_xref="taxon:204286"
     Protein         1..361
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=40521
     Region          32..343
                     /region_name="PD_CobS"
                     /note="cobaltochelatase, CobS subunit; TIGR01650"
                     /db_xref="CDD:130711"
ORIGIN      
        1 msdattmhha sadprndqan aeqprpagql qptelrgvre lfgidsdlkv pvflerdahv
       61 peidtayrfn pdvtlailag ftnnrrvmvq glhgtgksth ieqiaarlnw pclrvnldgh
      121 vsrldlvgkd aivirdgvqv tefqegivpw sltrpialif deydagrpdv mfviqriler
      181 dghftlldqn rvirphpqfr lfatantvgl gnqdglyhgt qllnhaqidr wnivakldyl
      241 prdeevkivl arvpakdnel gqaliramva vadltrkgfa ngdlsslmsp rtvitwaenc
      301 eifrnpalaf rlsylnkcde herplvaefy qrcfarelee saalmesdlm neqdsdkgar
      361 a
//
LOCUS       WP_258038235            4536 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: carbohydrate-binding protein [Cobetia].
ACCESSION   WP_258038235
VERSION     WP_258038235.1
KEYWORDS    RefSeq.
SOURCE      Cobetia
  ORGANISM  Cobetia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015387.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03422.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4536
                     /organism="Cobetia"
                     /db_xref="taxon:204286"
     Protein         1..4536
                     /product="carbohydrate-binding protein"
                     /GO_function="GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /calculated_mol_wt=475185
     Region          144..268
                     /region_name="CBM6-CBM35-CBM36_like"
                     /note="Carbohydrate Binding Module 6 (CBM6) and CBM35_like
                     superfamily; cl14880"
                     /db_xref="CDD:449372"
     Region          246..1937
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          500..609
                     /region_name="CBM6-CBM35-CBM36_like"
                     /note="Carbohydrate Binding Module 6 (CBM6) and CBM35_like
                     superfamily; cl14880"
                     /db_xref="CDD:449372"
     Region          <1318..1656
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
     Region          1550..1701
                     /region_name="CBM6-CBM35-CBM36_like"
                     /note="Carbohydrate Binding Module 6 (CBM6) and CBM35_like
                     superfamily; cl14880"
                     /db_xref="CDD:449372"
     Region          1860..1966
                     /region_name="CBM6-CBM35-CBM36_like"
                     /note="Carbohydrate Binding Module 6 (CBM6) and CBM35_like
                     superfamily; cl14880"
                     /db_xref="CDD:449372"
     Region          2356..2826
                     /region_name="YliI"
                     /note="Glucose/arabinose dehydrogenase, beta-propeller
                     fold [Carbohydrate transport and metabolism]; COG2133"
                     /db_xref="CDD:441736"
     Region          <2915..3019
                     /region_name="CBM6-CBM35-CBM36_like"
                     /note="Carbohydrate Binding Module 6 (CBM6) and CBM35_like
                     superfamily; cl14880"
                     /db_xref="CDD:449372"
     Region          3033..3158
                     /region_name="CBM6-CBM35-CBM36_like"
                     /note="Carbohydrate Binding Module 6 (CBM6) and CBM35_like
                     superfamily; cl14880"
                     /db_xref="CDD:449372"
     Region          4012..4152
                     /region_name="CBM6_cellulase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); appended to
                     glycoside hydrolase (GH) domains, including GH5
                     (cellulase); cd04080"
                     /db_xref="CDD:271146"
     Site            order(4026,4060,4062,4064,4095..4096,4138)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:271146"
     Site            order(4051..4057,4113..4120,4145)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:271146"
     Region          4179..4321
                     /region_name="CBM6_cellulase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); appended to
                     glycoside hydrolase (GH) domains, including GH5
                     (cellulase); cd04080"
                     /db_xref="CDD:271146"
     Site            order(4192,4225,4227,4229,4265..4266,4307)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:271146"
     Site            order(4216..4222,4282..4289,4314)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:271146"
     Region          4347..4482
                     /region_name="CBM6_cellulase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); appended to
                     glycoside hydrolase (GH) domains, including GH5
                     (cellulase); cd04080"
                     /db_xref="CDD:271146"
     Site            order(4358,4391,4393,4395,4424..4425,4468)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:271146"
     Site            order(4382..4388,4443..4450,4475)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:271146"
ORIGIN      
        1 mtfedaqdrl svferferpf vfdhlptpls gklkmmieal dergevlpgs geqfgfeves
       61 pdvvaeevsd qedtpqaaqa lltssdepaa gtgpallaep aplataalia pesfttlrie
      121 aedlsdddgd gnassiggag ievvtggdnp sntanasgta yvdfggatge tltftfsvte
      181 ageyelalgy alsqngdgsd rnrplrldvn gelqdrmfdl psttltgdat dfsefgerti
      241 rvqlqagent vsftsngasg pnvdylevra pdpdvfviqg edldigstsd vadagtnrvv
      301 tldniasftn gretfrvgae gasyldwasg naeaygdftf evatagtysv tvtyasssar
      361 piglflideg tpgqigtfqf aavtapnyyp ddvddvpadn qpgnggpsaw egwstetlei
      421 tlaagsntlr lggatngpni dkievallea davepvdpvi apvvmqaeda vlgadngaat
      481 vvrdaanpea ggfvglrpdf sgtgyvdfgs apgdsltftv nvaeagdydl nfryasngar
      541 plalsindge sselafvgtd pnagnvdpeg fdvwsyhtlt tslevgdntv tltipdgrsn
      601 gpnvdrlevt tagtgpvgdv vadadasvlt ftavdpllng atvgeagfsv sgldaditfv
      661 gvtfdegitv qevvpnpdgs ftldlsgfad gdlsvtliam dafgnraeqs laltldttad
      721 eggdlalegp qdaieaddsa svvfgvagid dgstleisfd ggvtrqsvvs dgdtltvdls
      781 tqapgdvivt livtdaagne asvaeavtla vvgsvtldvt fddatisayn ttqdnpsvgt
      841 gavveddggt ltlndnvwkr aalpedytit sgsiltldva isdspvpeiv aigfdadsnp
      901 fnggnsvyql ggsqtqggfv dlrgqgidng dgtlrftidl sahagitlds lvfvndddvg
      961 akgsasfsgv slseadvddt nsaprvvggg iadlsldega nlevdlpfvd ddgddlafsf
     1021 qvtdgdglpv tvdglsvsdt vlsgslaglv pgdytitvta ddgtastdtd falsienvnd
     1081 apvaepaale pyfgevgesf lqipladfas lfsdadgdsl tltaedlpag levidgviqg
     1141 tpseggtfdv vvratdpsgl satqslsfii egtqvgdsit ieaedftdld agnlivtgsa
     1201 sasneqlirl tsnapamigt dlsaggvepg wyiarlyvfd etdgegtltl tigdtvlear
     1261 ntttdslsad vvlnddfgtf vgsgargnag qsgnrkeivf etpvevtagd laslelrgag
     1321 gelmridsle feridepvnt aptlaglgaa isvdensagv aslvledadg dsltvtlsga
     1381 daalftydva sggiaflnpp daelaadsde dgiyeltvtv tdgedsvsqd tlitvadlne
     1441 siaidqtafa vdenlteiga iplvdedggt lglnapvfai tggadsplft idattgvlsf
     1501 tsardfelav dddedgvydv evsvsdgdls ttaqlsvtvn dvdeapfspl rlqaedgtvt
     1561 sfddganatd tvvrdadnpe dnanlenglr pgfsgtgyld fgdtagdnva wqievaqagq
     1621 ydisvryatn tdrpldlvin ggdplmlama stdpdgsgge egfdhwvfet ftvsleagsn
     1681 aivlaipaga ttgpnidrie vtdagsgpip edvsadedgd laivaaddtl dasqlaaavf
     1741 nvsgidddvi svavsfdgga treavtpdad gnitldlsgq lddqsgdlav slfvtdatgn
     1801 easasevvsf aegdgtpafn faiegealti idtdgdtqvr dadnpetnva sgpdglwddf
     1861 tgtgyldmga dagdaaefqv avdesgtytl evrytnagsn ganrpmdilv dglsqgnlaf
     1921 astgtdaagw enwttttlev eleagdntir lanlgnagpn idsltvsrdg vvperpvepg
     1981 erfsvkinfq pegtavpdgy iadngkafgt qsvtvddqth qygwiteasi ydgepgtepl
     2041 disaltsvav ndrtddiagl dprqgtyahf dqpgsayvra gweielddgy yevtvsigdt
     2101 sgpydsrnvl naegelfndp ftpfrpddfp adgnpsddtd gfrsdlvtri vqvsdgrltl
     2161 dslgldnent eiqyleiqal pdltpeddri aaedyafftd araiagvgdn evevdldpdd
     2221 gglpsgvdpt sdifvgisvv dgrggalles ladgsirlie tltgeevsfn anttggfdsl
     2281 tispsqtlke ftsytliidg fqdrganddl daptrefqky tntfitgeap eivardvafn
     2341 dvveldgasd nafgftslei tadgstmyia tiggqilryd idpvdgslgn rqelslpsdy
     2401 fhqdgadasn drrgiiglvi dptdpdvlwi tdnypiplsg rdngvpdfsg ritkitlegg
     2461 sefsgtaepy itglprsngd hvtnslefra npdydaetnp dvpshllyli qgsnsamgep
     2521 dsawgnrper llnaavmeid ptrdappggf dvtteplpdn gqntrfddpd ghpkddpipm
     2581 gngeflvfde rgvatvqdes gnvlesyydp yasdavltif atgarnaydl vwhsngflyv
     2641 ptngsaaggn vpddpstped erytsvekqd dylfkivegg yyghpnplrd eyilnggnpt
     2701 satdpnqvdk yptgtnpegt ydisgvyslg enrspngave ytsdvfggnl qgnvlfteys
     2761 ggddvrsitl dangnvigdd vlrdpegnvi syvdpldiie npvtgqlyll tlnrgngqsq
     2821 iirldpapgg vvdpvdpvdp vdptdelvsl lviqaedrtp ddgtavtlat gtdaeiqird
     2881 idnpetnqpd lpnglrpgaf gldgntddtd gtpggyadfg stnadfltft feldaeqagd
     2941 svlhlryang gnadrplevf vnnvsvgvfd fsppdgltgd aawaewltea vaatlvsgqn
     3001 tvrlqatadt gpnidqleil qeapdttpgv deyeaegavl dgavvvltsd ddrnasgdgy
     3061 vdfagtgdqt itwtldvaet gsydiafrya laatkddrpl glaingvdlg mlnfegqsna
     3121 desdwffqnt lvalqqgsnt itltapgavg pnidllqvpn apsdsfipvy advsngsrie
     3181 lesgdsartl neltadfyfs vdssglyrld laanagaddg qglaltlngq svkllaypgv
     3241 gdageegtyv eleagveynl ravstadgad dldyldvmpv agsdnadivv esgdaayysd
     3301 rlhfsyldnn sgsnpdrdfk esatvtisnt gsdvlevlda didgpftlad pgvfdgltla
     3361 agqslevtvl fdrdsytaps nnagdgvfeg rirlttndad spiaeihmag fwqardeggw
     3421 epnvnevwev fgfgnriegl stvgggensv lndfdlyrpv nddevlsryw slaegagear
     3481 itqlaayhgg ggatlgihnp gdkgqdvifs nhagdnnqsi lpvlsngnfa tatfglddip
     3541 agwagsgvfg ievanlstdp slnptgggtp padaegierg ytvrmfrald aegnvipdty
     3601 lgimdytgin ydyndnmfli egvtpvsgge ltvinndgvp sndrlvmsri enpanaaqev
     3661 hdevtvtlrn dgfeslditr ievsdatlfe lteaftavtl epgesvdviv rfiaddpndg
     3721 slyessliit ssdadegekv ielaglaqnr sesgqepgvq eiidafgyst nvaegqmnqg
     3781 glveangdei lspyfqradg gspikitqla ayhtqgdvar lfihdvdsrd idevlahdea
     3841 dgqtllprtl negdlltttt ldrdapfgff aeisgrqgyi swsdpdanlh edtvdaigtp
     3901 gnnlnwdend ghlirvyvar daagneipdt yiviqdyagv nydyndnifl venvttydpa
     3961 gaedadgngr vdlyddddnd gvpnfldnpe pvgqsafnag etawavgsdg ltlearlfdn
     4021 ggqgvayndt tqahqgdgfr sdeavdisng slaigyvadg ewleytlnve tagtyalnfs
     4081 asatsdgksi taafeqdgsf ytegqavavp dtdgftnftd vgpltfalee geqvlrltfn
     4141 ggqldlasln ltlvapvddg qqaytddgqp wqvgsdfsle avnydeggqd vayndssevq
     4201 egtdvrgegv dmasggsaig wiedgewvey tlnveqagty dmaflaslgv pgggqrsita
     4261 tfakeadapy asatpvgvsp tgswtsfvgt etaqvtleag eqvlrltfng gsmdlqgfsl
     4321 sldgqqafna ggipwqvqad eglsldavnf deggqgeayn elssaqfgsn yrdtpvdivg
     4381 egeaigwved gewleytidv eqagahtlsf vtsapdngrs itasveknge fydeasgtlp
     4441 nsgawgvyvd gpsltldlee gvqvlritfn ggsqdlasfq itrdpdvtpa gspnalamms
     4501 mledgdaipv sndeqapmsd dvglqgiqdd vqagll
//
LOCUS       WP_258038245             262 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: enoyl-CoA hydratase-related protein [Cobetia].
ACCESSION   WP_258038245
VERSION     WP_258038245.1
KEYWORDS    RefSeq.
SOURCE      Cobetia
  ORGANISM  Cobetia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012596.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00378.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Cobetia"
                     /db_xref="taxon:204286"
     Protein         1..262
                     /product="enoyl-CoA hydratase-related protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=28014
     Region          13..248
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     Site            order(25,27,60,64..68,114,116..118,140..141,144)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(66,118)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(98,106,127..130,142..145,151,153..155,157..158,
                     163..164,166..167,169..170,173,184,187,202,205..206)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
ORIGIN      
        1 mtlvdshlsl ehgvavmtfa rhdvrnaltg talvedllav aewvngcdsv galviigegs
       61 afsaggnvqd maqrkgdfag daaevaaryr rgiqrmtpav lgievpviaa vngpaigagf
      121 dlanmcdirl asdqarfget flslglipgd ggawllqrli gyqraceltf sgrivsaqea
      181 lalgivlevc aeedlmtral emarqmasqp rqatrltkrl mrrapemrld dfldlcasfq
      241 gqchqdpehh aavaallarm kr
//
LOCUS       WP_258038270             612 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: VRR-NUC domain-containing protein [Cobetia].
ACCESSION   WP_258038270
VERSION     WP_258038270.1
KEYWORDS    RefSeq.
SOURCE      Cobetia
  ORGANISM  Cobetia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae.
REFERENCE   1  (residues 1 to 612)
  AUTHORS   Hespanhol,J.T., Sanchez-Limache,D.E., Nicastro,G.G., Mead,L.,
            Llontop,E.E., Chagas-Santos,G., Farah,C.S., de Souza,R.F.,
            Galhardo,R.D.S., Lovering,A.L. and Bayer-Santos,E.
  TITLE     Antibacterial T6SS effectors with a VRR-Nuc domain are
            structure-specific nucleases
  JOURNAL   Elife 11, e82437 (2022)
   PUBMED   36226828
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 612)
  AUTHORS   Jin,H., Roy,U., Lee,G., Scharer,O.D. and Cho,Y.
  TITLE     Structural mechanism of DNA interstrand cross-link unhooking by the
            bacterial FAN1 nuclease
  JOURNAL   J Biol Chem 293 (17), 6482-6496 (2018)
   PUBMED   29514982
REFERENCE   3  (residues 1 to 612)
  AUTHORS   Pennell,S., Declais,A.C., Li,J., Haire,L.F., Berg,W.,
            Saldanha,J.W., Taylor,I.A., Rouse,J., Lilley,D.M. and Smerdon,S.J.
  TITLE     FAN1 activity on asymmetric repair intermediates is mediated by an
            atypical monomeric virus-type replication-repair nuclease domain
  JOURNAL   Cell Rep 8 (1), 84-93 (2014)
   PUBMED   24981866
REFERENCE   4  (residues 1 to 612)
  AUTHORS   Kinch,L.N., Ginalski,K., Rychlewski,L. and Grishin,N.V.
  TITLE     Identification of novel restriction endonuclease-like fold families
            among hypothetical proteins
  JOURNAL   Nucleic Acids Res 33 (11), 3598-3605 (2005)
   PUBMED   15972856
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020354.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08774.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Cobetia"
                     /db_xref="taxon:204286"
     Protein         1..612
                     /product="VRR-NUC domain-containing protein"
                     /GO_function="GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /calculated_mol_wt=68760
     Region          11..588
                     /region_name="PDDEXK_nuclease-like"
                     /note="PDDEXK family nucleases; cl40440"
                     /db_xref="CDD:477358"
ORIGIN      
        1 mqaapldnpr yylanfdtll dwvcqchadl lteteratvd aitrlpepsr allvrllmrk
       61 gdhfevtqlh yaeigdieaa sqplitpiad satpdglcrl nadlsleeml slvtlprlkd
      121 afpelprstp krrmpdalse llvdttprsl pewlndptan tlsvglgels rrlslmffgn
      181 lrqtlsdfvl selgllrcet valspdsraf tqrwevdryl aleqlregwq aarerlnrem
      241 phaglephwq riisaldevt ssegdatevn ranawlaqrr drlrfslard aerqgwhhaa
      301 alqyacleds ayapramprr vralelsgdi saahalacer laraditlde qlaleralpr
      361 lcrglglpap rrakapatpq itltvpdlat saaagihgve raaahalatp eapvfyveng
      421 llpalftllc wdvlfaplpg affhafhtgp adlyrpdfvn rrqaafedcf arlsdgryre
      481 tirerhqqkq giqapfvhwp llseellsha ldcippahle acfrhllanp rehraglpdl
      541 iqffpentre ryrmievkap tdrlqdnqrq wlalfarhai palecrvewq tvnasdasae
      601 dedtarkapt ar
//
LOCUS       WP_258038370              75 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6457 domain-containing protein, partial [Streptomyces sp.
            FM008].
ACCESSION   WP_258038370
VERSION     WP_258038370.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. FM008
  ORGANISM  Streptomyces sp. FM008
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040429.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20058.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Streptomyces sp. FM008"
                     /db_xref="taxon:1983802"
     Protein         <1..>75
                     /product="DUF6457 domain-containing protein"
     Region          7..>70
                     /region_name="DUF6457"
                     /note="Domain of unknown function (DUF6457); pfam20058"
                     /db_xref="CDD:437890"
ORIGIN      
        1 ararirehgh vlnewilaak eelgidldvd irvlldlard aahgverpaa plttflvgya
       61 aglhgrdadv prlgp
//
LOCUS       WP_258038380              59 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6479 family protein, partial [Streptomyces sp. FM008].
ACCESSION   WP_258038380
VERSION     WP_258038380.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. FM008
  ORGANISM  Streptomyces sp. FM008
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039795.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20087.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..59
                     /organism="Streptomyces sp. FM008"
                     /db_xref="taxon:1983802"
     Protein         1..>59
                     /product="DUF6479 family protein"
     Region          5..>53
                     /region_name="DUF6479"
                     /note="Family of unknown function (DUF6479); pfam20087"
                     /db_xref="CDD:466286"
ORIGIN      
        1 myatteaqvl gasesggigw vlgiglavla vavvgmlvwv vrkgiqtrae epeppspes
//
LOCUS       WP_258038392             366 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Streptomyces sp.
            FM008].
ACCESSION   WP_258038392
VERSION     WP_258038392.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. FM008
  ORGANISM  Streptomyces sp. FM008
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 366)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Streptomyces sp. FM008"
                     /db_xref="taxon:1983802"
     Protein         <1..366
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <1..366
                     /region_name="IolD"
                     /note="TPP-dependent trihydroxycyclohexane-1,2-dione
                     (THcHDO) dehydratase, myo-inositol metabolism
                     [Carbohydrate transport and metabolism]; COG3962"
                     /db_xref="CDD:443162"
ORIGIN      
        1 pvaatqagkg alphdhpqdv galghtgtat addlartadl vlavgtrltd fttasgtlfa
       61 adgvrfahln ldpadahkla ahavvgdare gltaltglvg ghrlpdahvt aytaakadwe
      121 arvdaayaap dptarptqtq llgaldalvt gedilvnaag slpgdlhrlw rarsadqyhv
      181 eygyscmgye ipgalgilla dphrpvwalv gdgtylmnpt elvtavqesl plklvlvdnh
      241 gyasigglsr avgaegfgta yrmpgpggll dgeplpldla anaaslgvrm lraetvaelr
      301 ealaevrtat vptgvyvrte tpdtvssptp aqawwdvpva rtahreeaar arqeydrnva
      361 arrrhl
//
LOCUS       WP_258038407             386 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase, partial [Streptomyces sp. FM008].
ACCESSION   WP_258038407
VERSION     WP_258038407.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. FM008
  ORGANISM  Streptomyces sp. FM008
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Streptomyces sp. FM008"
                     /db_xref="taxon:1983802"
     Protein         <1..386
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
     Region          12..379
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 apaaeagpre iyligntvde lggvtawthq marlfrrqgh pvhvigihea elkltlpgpp
       61 dypvtalyps hpptarplvg rrrlspaarl yerrrlaakq aavarlsgil aqaapgavav
      121 vtqvwpmewl rqadtsrvrl igmshesyay trachrhrwv kenyphvdrw lvltqedadd
      181 witldgmqnv gampnalahl patpsprtgr nvvsigrlad qkgvdmlldt walvaphrpd
      241 wrlriygage detalknqct slgldssvew rgrtddvpaa laegsvfvqs srgegfplal
      301 meamasgvpc aafdcapgvr eivrdgedgl lappgdldsl adrllrltgd qelrdtmgdk
      361 arvnvqrfse ahvlerweal frlldr
//
LOCUS       WP_258038418             178 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5685 family protein, partial [Streptomyces sp. FM008].
ACCESSION   WP_258038418
VERSION     WP_258038418.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. FM008
  ORGANISM  Streptomyces sp. FM008
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039826.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18937.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Streptomyces sp. FM008"
                     /db_xref="taxon:1983802"
     Protein         1..>178
                     /product="DUF5685 family protein"
     Region          1..>108
                     /region_name="DUF5685"
                     /note="Family of unknown function (DUF5685); pfam18937"
                     /db_xref="CDD:465920"
ORIGIN      
        1 mfgmvrpcth rlgerltaqw mahlcglcla lrgqagqfar vvtnydglvi svlteaqaga
       61 eragrrragp calrgmrras vaegdgarla aavslilasa ktrdhvtdqd gllahrpvaa
      121 aarriagvwd kegaragagv gfdtallvga verqpeveal agpgtpllav teptetat
//
LOCUS       WP_258038417             264 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase family 39 protein, partial [Streptomyces sp.
            FM008].
ACCESSION   WP_258038417
VERSION     WP_258038417.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. FM008
  ORGANISM  Streptomyces sp. FM008
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024629.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13231.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Streptomyces sp. FM008"
                     /db_xref="taxon:1983802"
     Protein         <1..264
                     /product="glycosyltransferase family 39 protein"
                     /EC_number="2.4.-.-"
ORIGIN      
        1 slaaawgiya vaerlygava gvtavalwav lpvgivqsma yseslftala awalyallre
       61 rwvvagllas lagltrpvgm avtaavlvgv alaarrerrl tpamaagall splgagayvv
      121 wvgartgdpl fgylsvqegw gngfdgglaf arfigsllag pgfwgglglv aglallawlc
      181 vrcvrqgqpa vllvyagivv vlavcasgyf gskprlllpa fplllplavg larwgavrrg
      241 lllagvglls agyagfwlna sgpp
//
LOCUS       WP_258038419             471 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Streptomyces sp. FM008].
ACCESSION   WP_258038419
VERSION     WP_258038419.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. FM008
  ORGANISM  Streptomyces sp. FM008
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 471)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Streptomyces sp. FM008"
                     /db_xref="taxon:1983802"
     Protein         1..>471
                     /product="AMP-binding protein"
     Region          52..450
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(170,173..178,180..181)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341253"
     Site            order(173,213..214,261,263..264,267,289..290,312..317,403,
                     415,418,426..429)
                     /site_type="active"
                     /db_xref="CDD:341253"
     Site            order(173,289..290,312..317,403,415,418,429)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341253"
     Site            order(213,263..264,267,289,426..428)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341253"
ORIGIN      
        1 mvanaeaavl ppwsndsadg agtppalgdl lvaparkwpd riaiddgtds htfaelerga
       61 lvlasrlagl gvgpgdrvvv laakravmpm iimavwkrga vyvpldaaep aprlhslltr
      121 lapaavlald drepalaapw lgkeqldeal agadaahttv ahrpedpayl vfasgatgep
      181 qgaeigvaal lahfgghnev lrltaesrvl slspfhfdvs lldtvlplsv gafvhqfrsl
      241 pagavirsvl arqrlthlla vtvmltqitg dgrqitpakl ptlelvmtga qvceaavlrp
      301 wlqnlpqvrl vqafgppeat ifslthelgp sgadrttacp vgrplrgtra rlvrdgaelr
      361 dpgevgelwv ggpqvmrgyf dqpgetartv veadgtrwfr tgdlcsrdpd gtlvlhryae
      421 eiawlagrrt hlaeirraal ecpgaegaav avvprhqrev lalvllakdr r
//
LOCUS       WP_258038428             420 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6716 putative glycosyltransferase [unclassified
            Streptomyces].
ACCESSION   WP_258038428
VERSION     WP_258038428.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042780.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20471.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..420
                     /product="DUF6716 putative glycosyltransferase"
                     /calculated_mol_wt=46260
     Region          5..342
                     /region_name="DUF6716"
                     /note="Putative glycosyltransferase (DUF6716); pfam20471"
                     /db_xref="CDD:466620"
ORIGIN      
        1 mrtallvaaf dsqlkwcari hrelrsrqfa crvvvpdira alseqqiada gvasvetmsw
       61 eemtgealea dvvvsglsgp ltkrlsvels alvprldgpg pvlvsgwvgi iiekitagyl
      121 drcgtdvvav nsahdvahfr eagrwlglpd gnlllsglpi isatpepqkq gpirrvlfad
      181 qptvpgsqae rgyiyqqlia yarahpertv llkprhrpge dtfhrmkhhp edllrgvelp
      241 pnfsvdytpv dvalaevdll vtmsstacle aidrgsrval vldlgvhery gnqvfldsgl
      301 lrtfrqited rigtpapawr dgyfhgagrt gteriadrve ellasgerps ravwetdyfr
      361 saaeshlata arlvprqspl arrklkhgpl kgtlshvayn glppvvrrpl krwakdhqlf
//
LOCUS       WP_258038468             110 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6221 family protein [unclassified Streptomyces].
ACCESSION   WP_258038468
VERSION     WP_258038468.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 110)
  AUTHORS   Shao,L., Zi,J., Zeng,J. and Zhan,J.
  TITLE     Identification of the herboxidiene biosynthetic gene cluster in
            Streptomyces chromofuscus ATCC 49982
  JOURNAL   Appl Environ Microbiol 78 (6), 2034-2038 (2012)
   PUBMED   22247174
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039693.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19730.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..110
                     /product="DUF6221 family protein"
                     /calculated_mol_wt=11704
     Region          <7..34
                     /region_name="DUF6221"
                     /note="Family of unknown function (DUF6221); pfam19730"
                     /db_xref="CDD:466164"
ORIGIN      
        1 mapsdprpag lahalrvlaq syaghpdhre kwrpytggtv tparrtlslp ravgapgvaa
       61 rawrtarpat sgrdrptale gppharttrp rrnprpprqa apgrpgparl
//
LOCUS       WP_258038404             310 aa            linear   BCT 02-MAR-2025
DEFINITION  CopD family protein [Streptomyces sp. FM008].
ACCESSION   WP_258038404
VERSION     WP_258038404.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. FM008
  ORGANISM  Streptomyces sp. FM008
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 310)
  AUTHORS   Cooksey,D.A.
  TITLE     Molecular mechanisms of copper resistance and accumulation in
            bacteria
  JOURNAL   FEMS Microbiol Rev 14 (4), 381-386 (1994)
   PUBMED   7917425
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017262.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05425.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Streptomyces sp. FM008"
                     /db_xref="taxon:1983802"
     Protein         1..310
                     /product="CopD family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=31946
ORIGIN      
        1 mglltlgali pllgpgaale gtgealapaa rpvgvlrtvl faalcvqage vwvarmvpav
       61 rgapagllpr awspvaaccg llaavalsai vangniwprt wselrfgely gtgdgvlall
      121 einafaaawl lalsrrpgla alplavlvva eavrahpeie tpllgsaltl vhltcgalwa
      181 ggllqvlrvl rlwqghglrq qgaallarya raaawlfaav tvtgtlstlr rmephtvleq
      241 ltttgygrtl lakllllavv avlalrarrr avaagdpgav fapgraeval lglvvavsal
      301 ltalpvpirw
//
LOCUS       WP_258038481             139 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Streptomyces sp.
            FM008].
ACCESSION   WP_258038481
VERSION     WP_258038481.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. FM008
  ORGANISM  Streptomyces sp. FM008
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 139)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Streptomyces sp. FM008"
                     /db_xref="taxon:1983802"
     Protein         1..>139
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          2..>129
                     /region_name="PRK07064"
                     /note="thiamine pyrophosphate-binding protein"
                     /db_xref="CDD:180820"
ORIGIN      
        1 mstpnggdll vrvlrelgvd tvfgivsvhn lplveavard lrfvpvrhea tavsaadayg
       61 rargtlgcal tstgtgagna agsliealsa qtavlhvtgq idspylgqgr gfihetkdqp
      121 gmlaavshha atvtdaada
//
LOCUS       WP_258038492             100 aa            linear   BCT 02-MAR-2025
DEFINITION  P27 family phage terminase small subunit, partial [Listeria
            monocytogenes].
ACCESSION   WP_258038492
VERSION     WP_258038492.1
KEYWORDS    RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016975.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05119.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Listeria monocytogenes"
                     /db_xref="taxon:1639"
     Protein         <1..100
                     /product="P27 family phage terminase small subunit"
ORIGIN      
        1 kveynikkle kellsnidtt sqkelekvnr yinliriyye ldksievdga vvvtengsqk
       61 ftktnpaiqe knrintslls iersfifkge ndnqdgsdli
//
LOCUS       WP_258038547             247 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein, partial [Streptomyces sp.
            FM008].
ACCESSION   WP_258038547
VERSION     WP_258038547.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. FM008
  ORGANISM  Streptomyces sp. FM008
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Streptomyces sp. FM008"
                     /db_xref="taxon:1983802"
     Protein         <1..247
                     /product="phosphopantetheine-binding protein"
     Region          <1..233
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
ORIGIN      
        1 gvgrgyrnrp gltalrfvad pfgtepgarl yltgdraryl pdggvefggr adqqvkvrgf
       61 rvepgeieta lsshpavaaa vvapgrdarg dtrlvgyavp rpghafvpaa lrahlkslvp
      121 aymvpavlve ldalplnsng kvdrralpep dpaerggtay vaprtpgeea lagiwqevlg
      181 regvgaeddf fdlggssvql lqvtsrvraa fgvaltvrdf ydaptvaglt aaveeqvlre
      241 leaamrq
//
LOCUS       WP_258038493             221 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase large subunit domain-containing protein, partial
            [Listeria monocytogenes].
ACCESSION   WP_258038493
VERSION     WP_258038493.1
KEYWORDS    RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (residues 1 to 221)
  AUTHORS   Xu,R.G., Jenkins,H.T., Chechik,M., Blagova,E.V., Lopatina,A.,
            Klimuk,E., Minakhin,L., Severinov,K., Greive,S.J. and Antson,A.A.
  TITLE     Viral genome packaging terminase cleaves DNA using the canonical
            RuvC-like two-metal catalysis mechanism
  JOURNAL   Nucleic Acids Res 45 (6), 3580-3590 (2017)
   PUBMED   28100693
REFERENCE   2  (residues 1 to 221)
  AUTHORS   Hilbert,B.J., Hayes,J.A., Stone,N.P., Duffy,C.M., Sankaran,B. and
            Kelch,B.A.
  TITLE     Structure and mechanism of the ATPase that powers viral genome
            packaging
  JOURNAL   Proc Natl Acad Sci U S A 112 (29), E3792-E3799 (2015)
   PUBMED   26150523
REFERENCE   3  (residues 1 to 221)
  AUTHORS   Schouler,C., Ehrlich,S.D. and Chopin,M.C.
  TITLE     Sequence and organization of the lactococcal prolate-headed bIL67
            phage genome
  JOURNAL   Microbiology (Reading) 140 (Pt 11), 3061-3069 (1994)
   PUBMED   7812447
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015321.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03354.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Listeria monocytogenes"
                     /db_xref="taxon:1639"
     Protein         1..>221
                     /product="terminase large subunit domain-containing
                     protein"
     Region          16..>221
                     /region_name="YmfN"
                     /note="Phage terminase-like protein, large subunit,
                     contains N-terminal HTH domain [Mobilome: prophages,
                     transposons]; COG4626"
                     /db_xref="CDD:443665"
ORIGIN      
        1 misnkhvdny iqsyesgkil lnkeridlin ylqkhvlsrd diyfdetqie nyiafsekwy
       61 fpldnwekfi apfiflyfke dnelfyeeff itlgrgggkn gfistlsnyf isplhginny
      121 dvsvvansed qakvsfkevf ntidgnpkle gsfdawkaqi igkgtnsvfk fqtsnaktkd
      181 ggregcviyd etheyedrqi idvfsgglgk vanpreffig t
//
LOCUS       WP_258038499             461 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase family 18 protein, partial [Streptomyces sp.
            FM008].
ACCESSION   WP_258038499
VERSION     WP_258038499.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. FM008
  ORGANISM  Streptomyces sp. FM008
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 461)
  AUTHORS   Perrakis,A., Tews,I., Dauter,Z., Oppenheim,A.B., Chet,I.,
            Wilson,K.S. and Vorgias,C.E.
  TITLE     Crystal structure of a bacterial chitinase at 2.3 A resolution
  JOURNAL   Structure 2 (12), 1169-1180 (1994)
   PUBMED   7704527
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00704.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Streptomyces sp. FM008"
                     /db_xref="taxon:1983802"
     Protein         <1..461
                     /product="glycosyl hydrolase family 18 protein"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          2..78
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(69..70,72..73)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          94..460
                     /region_name="ChiA"
                     /note="Chitinase, GH18 family [Carbohydrate transport and
                     metabolism]; COG3325"
                     /db_xref="CDD:442554"
ORIGIN      
        1 tptasdltkn svklswkaat ddkgvknydv lrdgakvatv tattftdqnl apgtdysysv
       61 qardtadqtg pvsapvkvtt pgdgtgpgpg prekinlgyf tewgvygrny hvknlvtsgs
      121 aekithinys fgnvqggkct igdsfaaydk aytaaesvdg vadtwdqplr gnfnqlrklk
      181 akyphikvlw sfggwtwsgg ftdavknpaa fakschdlve dprwadvfdg idldweypna
      241 cglscdssgp aalknmvqam raqfgtdlvt aaitadassg gkldaadyag aaqyfdwynv
      301 mtydffgawd ktgptaphsa lnsysgipka dfhsaaaiak lkakgvpask lllgigfygr
      361 gwtgvtqdap ggtatgpatg tyeagiedyk vlkntcpatg tvggtayakc gsnwwsydtp
      421 atiktkmtwa kdqglggaff wefsgdtagg elvaamdsgl r
//
LOCUS       WP_258038548             929 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Streptomyces sp.
            FM008].
ACCESSION   WP_258038548
VERSION     WP_258038548.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. FM008
  ORGANISM  Streptomyces sp. FM008
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 929)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..929
                     /organism="Streptomyces sp. FM008"
                     /db_xref="taxon:1983802"
     Protein         1..>929
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..>928
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
ORIGIN      
        1 myrsgdlarw lpdgtlehlg raddqvkirg yrielgeiet altthphihe tlvtthqdhd
       61 ghrrllaylv tdtpltpsql rthltttlpd hmipsryipl dhlpltpsgk vdrralpqpd
      121 tqteptntte htpprtpteh llattwatvl gteeigihdn ffdlggdsil siqvvshvrr
      181 elgarlsprl lfahptvael avavdaadad eagqreastv praprsgllp msfgqqrlwf
      241 ledfnegste yhsavglrlt grldtdalra atsdlvarhe alrttfdvvd gqgvqtvhpv
      301 lpaewrveea adeqearvla qrelerpydl rngplvrvlv vrlgeaehvc llgmhhivtd
      361 gwsmgvvaqe lgelytarvq grphglpeva vqypdfaawq rdrledggll grrldwwree
      421 lqgitplelp tdrprpavrt srgavvgfev paatvdglkk raraqdatlf maltaavkal
      481 farytgeqdi avgtasagrn eggleglvgf lvntvvlrtr idpeasfdal lgqvrgtvld
      541 afahedvpfe rlveavqper dtsrtplvqa mvvlqnapgt rpglgdldvt dyplerdtal
      601 fdltiefeeh agglralvey saelfeeetv arlgdhlnhl laaavadpar pvatlpllae
      661 gerervvrew agtegvapwp gtlhsqvaer aaehpdtiav vcgedaltyg eldrsanqla
      721 hhlislgagp ghlvglsver stdmavgllg imktgaaylp ldpaypadrl tymledsgar
      781 llithhhtqp apadiqvidl nteretlahq pttapsttvt pddlayviyt sgstgrpkgv
      841 aiehhtvlhl lansqplygf gpqdvwtvfh syafdfsvwe lwgalttgar avivphdtar
      901 npeamwhllt qekvtllsqt psmfrelvg
//
LOCUS       WP_258038509              78 aa            linear   BCT 02-MAR-2025
DEFINITION  cysteine peptidase family C39 domain-containing protein, partial
            [Streptomyces sp. FM008].
ACCESSION   WP_258038509
VERSION     WP_258038509.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. FM008
  ORGANISM  Streptomyces sp. FM008
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 78)
  AUTHORS   Havarstein,L.S., Diep,D.B. and Nes,I.F.
  TITLE     A family of bacteriocin ABC transporters carry out proteolytic
            processing of their substrates concomitant with export
  JOURNAL   Mol Microbiol 16 (2), 229-240 (1995)
   PUBMED   7565085
REFERENCE   2  (residues 1 to 78)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015377.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03412.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Streptomyces sp. FM008"
                     /db_xref="taxon:1983802"
     Protein         <1..>78
                     /product="cysteine peptidase family C39 domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          3..>77
                     /region_name="NHLM_micro_ABC1"
                     /note="NHLM bacteriocin system ABC transporter,
                     peptidase/ATP-binding protein; TIGR03796"
                     /db_xref="CDD:274788"
ORIGIN      
        1 pvrtptvlqm eavecgaacl amvlahhgrh vpleelriac gvsrdgsras nvlkaarsyg
       61 ltakgmqmep aalrevra
//
LOCUS       WP_258038591             285 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein, partial [Streptomyces sp.
            SM12].
ACCESSION   WP_258038591
VERSION     WP_258038591.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM12
  ORGANISM  Streptomyces sp. SM12
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Streptomyces sp. SM12"
                     /db_xref="taxon:1071602"
     Protein         <1..>285
                     /product="phosphopantetheine-binding protein"
     Region          <46..>279
                     /region_name="PRK05691"
                     /note="peptide synthase; Validated"
                     /db_xref="CDD:235564"
ORIGIN      
        1 aqefsdalwt gllsgagcal rpvrpadvpg gapaadtatt tartvvlddr lrpaptgipg
       61 elylpaapgd glphhpagta vqwipdpigp agsrllrtgr ramrtpdgal rdlgvparar
      121 vggyrpdtdr lsatlsalpg vhaaatlvre dspgqprltg yvvplpgttf eeaqllaqla
      181 drlpefmlpg rlvplpelpv gpdgrlaate lpdpdtvtgd gsgrangtsg npgvvpreqq
      241 avgelfrevl ggkevgaedn ffrvgghsll avrlvnrvra vlgte
//
LOCUS       WP_258038598             192 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5682 family protein, partial [Streptomyces sp. SM12].
ACCESSION   WP_258038598
VERSION     WP_258038598.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM12
  ORGANISM  Streptomyces sp. SM12
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040143.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18934.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Streptomyces sp. SM12"
                     /db_xref="taxon:1071602"
     Protein         <1..192
                     /product="DUF5682 family protein"
     Region          <1..155
                     /region_name="DUF5682"
                     /note="Family of unknown function (DUF5682); pfam18934"
                     /db_xref="CDD:436841"
ORIGIN      
        1 aalrrlterq atpallrgra arllldegel peedaerlmg lelspgnppa qaagwvegfl
       61 aggglllvhd erllglldaw lsavprdsfe dvlpllrrtf tafdsgvrrs vgelarrgpg
      121 rgtgtvaarg hfpgfgeepd taradavlpv lrlllgtppa tpsvtpfptd rstttasspa
      181 aapavapiga ss
//
LOCUS       WP_258038599             208 aa            linear   BCT 02-MAR-2025
DEFINITION  trehalase-like domain-containing protein, partial [Streptomyces sp.
            SM12].
ACCESSION   WP_258038599
VERSION     WP_258038599.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM12
  ORGANISM  Streptomyces sp. SM12
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039283.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19291.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Streptomyces sp. SM12"
                     /db_xref="taxon:1071602"
     Protein         1..>208
                     /product="trehalase-like domain-containing protein"
     Region          17..>198
                     /region_name="SGA1"
                     /note="Glucoamylase (glucan-1,4-alpha-glucosidase), GH15
                     family [Carbohydrate transport and metabolism]; COG3387"
                     /db_xref="CDD:442614"
ORIGIN      
        1 mseicdttea vlappylpia ehgligdlrt aalvgtdgrv dwfcaprfds psvfgallda
       61 erggfwkiep rcevanrqqf yfpdtnilit rmltedgmve vqdfmpvlre hdaghrqrlv
      121 rrvvsvrghm rmrvevaprl dygrdrhrle rtptgvrfvg rslaltlhss igleeragdv
      181 tgtfrvaege svlfvlepei argsadga
//
LOCUS       WP_258038624             391 aa            linear   BCT 02-MAR-2025
DEFINITION  CbiQ family ECF transporter T component [Streptomyces sp. SM12].
ACCESSION   WP_258038624
VERSION     WP_258038624.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM12
  ORGANISM  Streptomyces sp. SM12
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 391)
  AUTHORS   Roth,J.R., Lawrence,J.G., Rubenfield,M., Kieffer-Higgins,S. and
            Church,G.M.
  TITLE     Characterization of the cobalamin (vitamin B12) biosynthetic genes
            of Salmonella typhimurium
  JOURNAL   J Bacteriol 175 (11), 3303-3316 (1993)
   PUBMED   8501034
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014420.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02361.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Streptomyces sp. SM12"
                     /db_xref="taxon:1071602"
     Protein         1..391
                     /product="CbiQ family ECF transporter T component"
                     /calculated_mol_wt=40743
ORIGIN      
        1 mnraqrpggr srlpvllqpp lpralhpgaw wlwalglava asrttnpill alilavaayv
       61 vvrrrgdapw alsfkmylll galivvmrvv friifgggqg dtilftlpei plpeaaagir
      121 lfgsvaaeql lgglydglrl atmvvcvgaa nsladpkrml ktlpgalyei gasvvvaltv
      181 apqlidsvrr vrrarrlrga qgkgrralrg iiipvledal nrslalaaam asrgygrtgg
      241 vdprtrlvtg llvvaglvgi cgglygvlds sapallgapl llgggalala glllggrrvr
      301 rtgyrpdhwr paelvtagag iataalmflt arvdpgnlyp slsplawpdv smvpvlavlv
      361 galpalltpe pprsgvplpv paaeprkepv a
//
LOCUS       WP_258038688             210 aa            linear   BCT 02-MAR-2025
DEFINITION  phage/plasmid replication domain-containing protein, partial
            [Haemophilus seminalis].
ACCESSION   WP_258038688
VERSION     WP_258038688.1
KEYWORDS    RefSeq.
SOURCE      Haemophilus seminalis
  ORGANISM  Haemophilus seminalis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017008.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05155.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Haemophilus seminalis"
                     /db_xref="taxon:2582921"
     Protein         <1..210
                     /product="phage/plasmid replication domain-containing
                     protein"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
     Region          <20..200
                     /region_name="rep_II_X"
                     /note="phage/plasmid replication protein, gene II/X
                     family; TIGR01629"
                     /db_xref="CDD:273723"
     Region          116..203
                     /region_name="Phage_X"
                     /note="Phage X family; cl11585"
                     /db_xref="CDD:448318"
ORIGIN      
        1 cttdwlsekg nanliypscy ikheemrvhs ydkikrkfge esqefryykn vyeyckengv
       61 vrfeqklksr ylqrenlcyw gisdfsklet ihqgfidmyk klnvseikle tiaeqlvsng
      121 vvdslrkant safyamrwss gedlsnlssa tfkrhranlr kigidiatpc diekfqavrv
      181 isceniivrp fkapdfyqfp snapqlrfvv
//
LOCUS       WP_258038711             275 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Streptomyces
            sp. SM12].
ACCESSION   WP_258038711
VERSION     WP_258038711.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM12
  ORGANISM  Streptomyces sp. SM12
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Streptomyces sp. SM12"
                     /db_xref="taxon:1071602"
     Protein         1..>275
                     /product="ABC transporter substrate-binding protein"
     Region          65..>269
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 msgrptrgaa prgttvarat avlltgallt pllagcgsdd dtgsgapara vaaadrstlt
       61 eggvlnwavd avpatlnafq rdadpvtdrv aqavlpmlft ldeegrptrn pdflesaevt
      121 areprqtvvy tlnpdarwsd gtplgaedfi aqwkalsged nsywtarnvg ydridsvepg
      181 krdgevrvtf tkpyadwrsl fsplypqavt gsadafnsga rdelptgagp flvdsmdren
      241 grvtlvrned wwgdrallde lvlnavphdr rlrsl
//
LOCUS       WP_258038748             156 aa            linear   BCT 02-MAR-2025
DEFINITION  radical SAM protein, partial [Streptomyces sp. SM12].
ACCESSION   WP_258038748
VERSION     WP_258038748.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM12
  ORGANISM  Streptomyces sp. SM12
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Benjdia,A., Leprince,J., Guillot,A., Vaudry,H., Rabot,S. and
            Berteau,O.
  TITLE     Anaerobic sulfatase-maturating enzymes: radical SAM enzymes able to
            catalyze in vitro sulfatase post-translational modification
  JOURNAL   J Am Chem Soc 129 (12), 3462-3463 (2007)
   PUBMED   17335281
REFERENCE   2  (residues 1 to 156)
  AUTHORS   Berteau,O., Guillot,A., Benjdia,A. and Rabot,S.
  TITLE     A new type of bacterial sulfatase reveals a novel maturation
            pathway in prokaryotes
  JOURNAL   J Biol Chem 281 (32), 22464-22470 (2006)
   PUBMED   16766528
REFERENCE   3  (residues 1 to 156)
  AUTHORS   Sofia,H.J., Chen,G., Hetzler,B.G., Reyes-Spindola,J.F. and
            Miller,N.E.
  TITLE     Radical SAM, a novel protein superfamily linking unresolved steps
            in familiar biosynthetic pathways with radical mechanisms:
            functional characterization using new analysis and information
            visualization methods
  JOURNAL   Nucleic Acids Res 29 (5), 1097-1106 (2001)
   PUBMED   11222759
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015983.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04055.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Streptomyces sp. SM12"
                     /db_xref="taxon:1071602"
     Protein         1..>156
                     /product="radical SAM protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0051539 - 4 iron, 4 sulfur cluster
                     binding [Evidence IEA]"
     Region          45..>103
                     /region_name="SkfB"
                     /note="Radical SAM superfamily maturase, SkfB/NifB/PqqE
                     family [Cell cycle control, cell division, chromosome
                     partitioning, Coenzyme transport and metabolism]; COG0535"
                     /db_xref="CDD:440301"
ORIGIN      
        1 mdrsirsvrl lsaatprgaa grteketdvl ladlmslrqt vgagvlvtlt ercplscahc
       61 sasatltgrd ldagdllrfl rtftpdcrpe vlmltggepl trpalvveaa qaaraagtrt
      121 avlsggffar ggalppairr vadtlldlfq lvggtd
//
LOCUS       WP_258038770             336 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase, partial [Streptomyces sp. SM12].
ACCESSION   WP_258038770
VERSION     WP_258038770.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM12
  ORGANISM  Streptomyces sp. SM12
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Streptomyces sp. SM12"
                     /db_xref="taxon:1071602"
     Protein         1..>336
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          71..>317
                     /region_name="T7SS_mycosin"
                     /note="type VII secretion-associated serine protease
                     mycosin; TIGR03921"
                     /db_xref="CDD:274856"
ORIGIN      
        1 mygdlcrraa agtaaavlpa lamltlvsvp ahaqddpvsl pplvlrladd apctgasett
       61 vesrpwtwra lqlarswels tgegvtvgvv stgvgdelaa lggrvaaigd agedcvghgs
      121 fvagliagta dgdapvagva pdarvlaarg tdergapdad slaegirgav dggasvvyvg
      181 lalrgeseev aaaveeavea dvlvvapaap dvaeeeaprg eelpqqdywp asmpqvlsvi
      241 dfgpqdarpe gaplplyadl aapggavvgv gpqggghylg sgsslaaahv agaaalvrsy
      301 qpeldagevf rrltasaypd ivprldvvaa lttfld
//
LOCUS       WP_258038743             521 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase family 18 protein [Streptomyces sp. SM12].
ACCESSION   WP_258038743
VERSION     WP_258038743.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM12
  ORGANISM  Streptomyces sp. SM12
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 521)
  AUTHORS   Perrakis,A., Tews,I., Dauter,Z., Oppenheim,A.B., Chet,I.,
            Wilson,K.S. and Vorgias,C.E.
  TITLE     Crystal structure of a bacterial chitinase at 2.3 A resolution
  JOURNAL   Structure 2 (12), 1169-1180 (1994)
   PUBMED   7704527
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00704.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Streptomyces sp. SM12"
                     /db_xref="taxon:1071602"
     Protein         1..521
                     /product="glycosyl hydrolase family 18 protein"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=54809
     Region          16..113
                     /region_name="CBM_2"
                     /note="Cellulose binding domain; pfam00553"
                     /db_xref="CDD:425748"
     Region          146..519
                     /region_name="ChiA"
                     /note="Chitinase, GH18 family [Carbohydrate transport and
                     metabolism]; COG3325"
                     /db_xref="CDD:442554"
ORIGIN      
        1 mtalvvlasp aqaatatasf skvsqwdtgf ggqwtvtntg tstingwtve wefpsgtsts
       61 tvwdgvltrs gnhysvtntg wngtlapgat asfgftgsgt geptgcrvng vscdgggdpt
      121 npdptnpdpt npdptdpdpt dptdpgpgep gdhvitgyft ewgvydrnyh arnivtsgsa
      181 skithinysf gnvqngrctm gdsyaatdra ytaaesvdgv adtwdqplrg nfnqlkklke
      241 myphiqivws fggwtwsggf teamqnpqaf aqscfdlvnd prwdgvfdgi dldweypngc
      301 glscdssgpq ifrtmmqtfk gvfgdqlvta aitadassgg kidavdyagg aqyadlihvm
      361 tydffgafaa qgptaphspl tsypgipqqg fnsadaiakl kaqgvpshkl tlgigfygrg
      421 wtgvtqsapg gsatgaapgt yeagiedykv laqrcpatgt vggtayahcg nqwwsydtpq
      481 tirakmdwak qqglggamfw elsgdtsdgv linaidqgln g
//
LOCUS       WP_258038789              99 aa            linear   BCT 02-MAR-2025
DEFINITION  CBS domain-containing protein, partial [Streptomyces sp. SM12].
ACCESSION   WP_258038789
VERSION     WP_258038789.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM12
  ORGANISM  Streptomyces sp. SM12
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 99)
  AUTHORS   Scott,J.W., Hawley,S.A., Green,K.A., Anis,M., Stewart,G.,
            Scullion,G.A., Norman,D.G. and Hardie,D.G.
  TITLE     CBS domains form energy-sensing modules whose binding of adenosine
            ligands is disrupted by disease mutations
  JOURNAL   J Clin Invest 113 (2), 274-284 (2004)
   PUBMED   14722619
REFERENCE   2  (residues 1 to 99)
  AUTHORS   Kemp,B.E.
  TITLE     Bateman domains and adenosine derivatives form a binding contract
  JOURNAL   J Clin Invest 113 (2), 182-184 (2004)
   PUBMED   14722609
REFERENCE   3  (residues 1 to 99)
  AUTHORS   Janosik,M., Kery,V., Gaustadnes,M., Maclean,K.N. and Kraus,J.P.
  TITLE     Regulation of human cystathionine beta-synthase by
            S-adenosyl-L-methionine: evidence for two catalytically active
            conformations involving an autoinhibitory domain in the C-terminal
            region
  JOURNAL   Biochemistry 40 (35), 10625-10633 (2001)
   PUBMED   11524006
REFERENCE   4  (residues 1 to 99)
  AUTHORS   Zhang,R., Evans,G., Rotella,F.J., Westbrook,E.M., Beno,D.,
            Huberman,E., Joachimiak,A. and Collart,F.R.
  TITLE     Characteristics and crystal structure of bacterial
            inosine-5'-monophosphate dehydrogenase
  JOURNAL   Biochemistry 38 (15), 4691-4700 (1999)
   PUBMED   10200156
REFERENCE   5  (residues 1 to 99)
  AUTHORS   Ponting,C.P.
  TITLE     CBS domains in CIC chloride channels implicated in myotonia and
            nephrolithiasis (kidney stones)
  JOURNAL   J Mol Med (Berl) 75 (3), 160-163 (1997)
   PUBMED   9106071
REFERENCE   6  (residues 1 to 99)
  AUTHORS   Bateman,A.
  TITLE     The structure of a domain common to archaebacteria and the
            homocystinuria disease protein
  JOURNAL   Trends Biochem Sci 22 (1), 12-13 (1997)
   PUBMED   9020585
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012780.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00571.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Streptomyces sp. SM12"
                     /db_xref="taxon:1071602"
     Protein         <1..99
                     /product="CBS domain-containing protein"
     Region          <1..81
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
     Site            order(5,10..11,14,37,59..61,76)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:341390"
     Region          37..80
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341390"
ORIGIN      
        1 drmcgiltdr divtkcvaag hdparvtage lcegtprwis teadvsdvle emgghrirrl
       61 pvvdtdkrlv gmiseadlar hlseeeiagf vervyagtp
//
LOCUS       WP_258038792             208 aa            linear   BCT 02-MAR-2025
DEFINITION  DDE-type integrase/transposase/recombinase [Streptomyces sp. SM12].
ACCESSION   WP_258038792
VERSION     WP_258038792.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM12
  ORGANISM  Streptomyces sp. SM12
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 208)
  AUTHORS   Dyda,F., Hickman,A.B., Jenkins,T.M., Engelman,A., Craigie,R. and
            Davies,D.R.
  TITLE     Crystal structure of the catalytic domain of HIV-1 integrase:
            similarity to other polynucleotidyl transferases
  JOURNAL   Science 266 (5193), 1981-1986 (1994)
   PUBMED   7801124
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012870.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00665.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Streptomyces sp. SM12"
                     /db_xref="taxon:1071602"
     Protein         1..208
                     /product="DDE-type integrase/transposase/recombinase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=23732
     Region          <4..159
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 mftwditkaa gpvkgawyha yviidifsry ivghtverae savraeelir ktiarngivp
       61 etvhadrgts ttskkvsqll tdlgitrshs rpkvsndnpy seahfkttky msdhperfds
      121 lartrewfda fttyydhehr hsgigwhtpa svhfgtaeev rdqravtlae ayarhperfg
      181 rrprppripq qawtndpanr repapqts
//
LOCUS       WP_258038809            1631 aa            linear   BCT 02-MAR-2025
DEFINITION  YadA-like family protein [Haemophilus seminalis].
ACCESSION   WP_258038809
VERSION     WP_258038809.1
KEYWORDS    RefSeq.
SOURCE      Haemophilus seminalis
  ORGANISM  Haemophilus seminalis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (residues 1 to 1631)
  AUTHORS   Sandt,C.H. and Hill,C.W.
  TITLE     Nonimmune binding of human immunoglobulin A (IgA) and IgG Fc by
            distinct sequence segments of the EibF cell surface protein of
            Escherichia coli
  JOURNAL   Infect Immun 69 (12), 7293-7303 (2001)
   PUBMED   11705900
REFERENCE   2  (residues 1 to 1631)
  AUTHORS   Hoiczyk,E., Roggenkamp,A., Reichenbecher,M., Lupas,A. and
            Heesemann,J.
  TITLE     Structure and sequence analysis of Yersinia YadA and Moraxella
            UspAs reveal a novel class of adhesins
  JOURNAL   EMBO J 19 (22), 5989-5999 (2000)
   PUBMED   11080146
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015831.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03895.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1631
                     /organism="Haemophilus seminalis"
                     /db_xref="taxon:2582921"
     Protein         1..1631
                     /product="YadA-like family protein"
                     /calculated_mol_wt=168225
     Region          5..1487
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          874..1630
                     /region_name="Hia"
                     /note="Autotransporter adhesin [Intracellular trafficking,
                     secretion, and vesicular transport, Extracellular
                     structures]; COG5295"
                     /db_xref="CDD:444098"
ORIGIN      
        1 mnhlaagtad ddavnvaqlk svnlafkgdn ntkgdvrlhd qrlsvvgatg sfittkandn
       61 kleisttqgt fsttadgkss pttaglattt avasainnsg wevrakgtkv glvnpgdkvd
      121 ftnadnsiei essaeangls tikfkavtak intekkhpve itinngittk kidktkqatp
      181 tgkfvvptgd dtnkyalata ydvadkvnqt gwnlytngga palinpgdyv nfksgnatna
      241 nvvteasega tisydvnvdn ttikidpngn kltantgdvd svtntegnsk kgqvtihkds
      301 lepsktdsgk latvdtvvka vnnakwfaka dnnggeiadd aktndaddad gqamgagdkl
      361 tlkagknlrv krdganftfa tdndvtfnkv tsnefvvnpn gkftvgtgat inmgnniihg
      421 vatgvadtda vnvaqlkant ttveagknvt vnktkddatg ktftvhseka tvskednspi
      481 kltstsntse httdykvgld idegtlevkn gklaakaqak aievveskeg ddniakvnvk
      541 sgqnkgdaga tyqvsvtknd vkdaakeavd vrgsdfitvt ptdgehlkth tvaaktgeia
      601 vtettgavts matatglttn kavadaiaks gfqlkqgeea taktvinpgd sltfkdgqgt
      661 kavvnangdv qvnadvaslt ggdnvtvkdn gngsftisat dtntqasvsk aanspitina
      721 tgadnaknye ldvavdgtti skaggtlhae tgaieevttt tgdnakkkgq vqaksndenk
      781 vatvsnvana inkakwfaka dnnggeiadd aktndaddad gqamgagdkl tlkagknlrv
      841 krdganftfa tdndvtfnkv tsnefvvnpn gkftvgtgat inmgnniihg vatgvadtda
      901 vnvaqlkste rhitptryty ndtdksvtlt ytdgtgkvvp nteakidlsg laskikdysf
      961 ktnatgsnlv gtgtdtkves gksvdfaasd nltlkqdvkd gnvtytyglk nqvvvgekgt
     1021 pgkdgidgsi gvngkdgsav aingedgsig lngkdgkngl tikgqdgkvg vdgkdgetrl
     1081 vyvekadptk pgssdkthel atlddgmkyg gdigevanvk lnkqvdikgg vtdktklsdn
     1141 nigvistpna ttggteltvk lakelkglts aefkggddna vtnitnsgit ikpansndds
     1201 ktvsltntgl nnggnkithv aegkddtdav nvkqlkdfks evaeggltfa gnsgtdhkak
     1261 lnstvnikga egntdanqfd ngknvmtavn gntvtvsikk tpeveginit dttgnvkvkl
     1321 tqtneglkvs dnndqatrit nvkagkkdtd avnvkqlnaa ktevtagdni dvrsstgang
     1381 qtiykvsand tsaaveagsd hvkvtkaant hkdgsttvtd ytvdlsdktk gdigkgvkay
     1441 dkvtnegltf nadhgttgvk klgskvavkg dgknitttan engvtvsmed nikvnsvtak
     1501 evkvgdvnin enginaggkr itnvapgkdg tdavnvnqlk yvagnisnqi nnvdkglrag
     1561 iagalasggl yhvttagksm vsvgagtyrg qnalavgysr lsdngkvgvk ftvnsnsqgh
     1621 sgasasvgyq w
//
LOCUS       WP_258038817             657 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Streptomyces sp.
            SM12].
ACCESSION   WP_258038817
VERSION     WP_258038817.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM12
  ORGANISM  Streptomyces sp. SM12
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 657)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Streptomyces sp. SM12"
                     /db_xref="taxon:1071602"
     Protein         <1..>657
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <2..>398
                     /region_name="PRK05691"
                     /note="peptide synthase; Validated"
                     /db_xref="CDD:235564"
     Region          203..631
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation domain of nonribosomal
                     peptide synthetases (NRPSs) and similar domains; cd19540"
                     /db_xref="CDD:380463"
ORIGIN      
        1 tdtqtkirgf riepaeveta llehpeiaqa avhthpdrhg tarlavyvvl tpvatatpqd
       61 lrgwartrlp ehmvpcyvtv mdrlpltang kldraalpep tttatdgrtp rtplettltt
      121 lftttlttph pltiddnffd hgghsllaar ltnhirthtg thltirdifh hptpaslahh
      181 itqlgtdtaq sgsltsavgr perlplsfaq rrlwllaame ergtaynvpm aarlsglpdp
      241 avlraavadl verheplrtv yathegepvq rvlppgepaa fvehrrlsag elpgqlaaag
      301 rhafdlekep plrvtvfdtg dggatllvll hhiatdgqsl gplfedlata yaaraagtap
      361 awaplpvqya dyalwqqrtl gdpadenspl grdlafwrkt leelpeelpl nldrprpsva
      421 ghrgatvpvd fgpelyarlt rlaqaerstp fmvlqaalaa altrlgaged iplgspvagr
      481 petelaplvg ffvntlvlrt dtsgnptfre llgrvraadl dafahenapf dqvleavapr
      541 rspsrhplfq vclalesgpp ptvrlaglep apasvvdtgg akfdlefllr gdetdglgga
      601 llynrdlfee etarrmvgtl rrvldhvlre pdtalsaiev ldgvewglvv eewnnta
//
LOCUS       WP_258038877             113 aa            linear   BCT 02-MAR-2025
DEFINITION  RNase A-like domain-containing protein [Bacillus halotolerans].
ACCESSION   WP_258038877
VERSION     WP_258038877.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 113)
  AUTHORS   Batot,G., Michalska,K., Ekberg,G., Irimpan,E.M., Joachimiak,G.,
            Jedrzejczak,R., Babnigg,G., Hayes,C.S., Joachimiak,A. and
            Goulding,C.W.
  TITLE     The CDI toxin of Yersinia kristensenii is a novel bacterial member
            of the RNase A superfamily
  JOURNAL   Nucleic Acids Res 45 (9), 5013-5025 (2017)
   PUBMED   28398546
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037816.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18431.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         1..113
                     /product="RNase A-like domain-containing protein"
                     /calculated_mol_wt=12796
     Region          1..112
                     /region_name="CdiA-CT_Yk_RNaseA-like"
                     /note="C-terminal (CT) domain of the contact-dependent
                     growth inhibition (CDI) system protein CdiA (CdiA-CT) of
                     Yersinia kristensenii, and similar proteins; cd20684"
                     /db_xref="CDD:411002"
     Site            order(3..4,26..28,64,66,82,94,96,107..108,110)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:411002"
     Site            order(4,15,108,110)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:411002"
ORIGIN      
        1 merhvgrtde elierlrtdp nphitalstf kdrataeria nsvlndpkni kkienwiddp
       61 kkpklmlryk gdgeiigrsv srnselvenv tnakiilkkd nngnfiltgy ptk
//
LOCUS       WP_258038881             436 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Bacillus
            halotolerans].
ACCESSION   WP_258038881
VERSION     WP_258038881.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 436)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         <1..436
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..401
                     /region_name="E_NRPS"
                     /note="Epimerization domain of nonribosomal peptide
                     synthetases (NRPSs); belongs to the Condensation-domain
                     family; cd19534"
                     /db_xref="CDD:380457"
ORIGIN      
        1 hsakgfdper vektlqalie hhdalrmvyr eengdiiqay kridecevsf eivdlygsde
       61 dmlksqikvl adslqssldl qngpllkgel yrteagdhll iavhhlvvdg vswrilledf
      121 asgyvqaene ekivfpqktn sfkdwaeela afsqsahllq qaeywaqida eevsavpkdd
      181 eteervvkht ssvicelnee dtkhlltdvh qpygteindi llsalgltmk ewtdgvkigi
      241 nleghgredi ipnvnisrtv gwftaqypvv ldmsetdvsa vikavkenlr rvpdkgvgyg
      301 tlryfteqae aqgftpeisf nylgqfdsev ktdffepsaf dmgrqvsees ealyalsfsg
      361 mirngrfvls csynekeyer atveaqmerf kenllliirh ctekedkeft psdfsagdle
      421 mdemgdifdm leenlk
//
LOCUS       WP_258038899             231 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein, partial [Bacillus
            halotolerans].
ACCESSION   WP_258038899
VERSION     WP_258038899.1
KEYWORDS    RefSeq.
SOURCE      Bacillus halotolerans
  ORGANISM  Bacillus halotolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Bacillus halotolerans"
                     /db_xref="taxon:260554"
     Protein         <1..>231
                     /product="phosphopantetheine-binding protein"
     Region          1..>231
                     /region_name="PRK12316"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237054"
ORIGIN      
        1 gyrielseie vqlaqlsevq daavtavkdk ggntaiaayv tpetvdteal ksalkdtlpd
       61 ymipafwvtl nelpvtangk vdrkalpepd ieagggeyka pstdmeella giwqdvlgis
      121 evgvsdnffs lggdsikgiq masrlnqhgw klemkdlfqh ptieeltqyv eraegkqadq
      181 gpvegevilt piqrwffekn ftnkhhwnqs vmlhsakgfd pervektlqa l
//
LOCUS       WP_258038923             230 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase domain-containing protein, partial
            [Tetragenococcus halophilus].
ACCESSION   WP_258038923
VERSION     WP_258038923.1
KEYWORDS    RefSeq.
SOURCE      Tetragenococcus halophilus
  ORGANISM  Tetragenococcus halophilus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Tetragenococcus.
REFERENCE   1  (residues 1 to 230)
  AUTHORS   Xiong,Y. and Eickbush,T.H.
  TITLE     Origin and evolution of retroelements based upon their reverse
            transcriptase sequences
  JOURNAL   EMBO J 9 (10), 3353-3362 (1990)
   PUBMED   1698615
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00078.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Tetragenococcus halophilus"
                     /db_xref="taxon:51669"
     Protein         <1..230
                     /product="reverse transcriptase domain-containing protein"
     Region          <1..163
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 vlspllcnvy lheldkelek rghqfvryad dfviyvkskr agervlksvt rfiekdlkli
       61 vnqdksqvgs ptrlkflscl mmkvngicrf iptkeakkkf kaelkrrtsr kragdfrtii
      121 keinqvtrgw igyfglgfir gfiqkeiepw lhhrirqlil krwkapktki tkllsygldv
      181 dhakmigysr kkywrlskts evhrtltner lhrwglvsls alvesayary
//
LOCUS       WP_258038930             174 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase domain-containing protein, partial
            [Tetragenococcus halophilus].
ACCESSION   WP_258038930
VERSION     WP_258038930.1
KEYWORDS    RefSeq.
SOURCE      Tetragenococcus halophilus
  ORGANISM  Tetragenococcus halophilus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Tetragenococcus.
REFERENCE   1  (residues 1 to 174)
  AUTHORS   Xiong,Y. and Eickbush,T.H.
  TITLE     Origin and evolution of retroelements based upon their reverse
            transcriptase sequences
  JOURNAL   EMBO J 9 (10), 3353-3362 (1990)
   PUBMED   1698615
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00078.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Tetragenococcus halophilus"
                     /db_xref="taxon:51669"
     Protein         <1..>174
                     /product="reverse transcriptase domain-containing protein"
     Region          1..>166
                     /region_name="YkfC"
                     /note="Retron-type reverse transcriptase [Mobilome:
                     prophages, transposons]; COG3344"
                     /db_xref="CDD:442573"
ORIGIN      
        1 nlktaatrvr rnkgaagvdg mavdevedhi eklyaplrqk llqgtyqpqp vkqveipkpn
       61 gekrqlgipc vrdrvvqqai rqviepiidp yflpqshgfr pnkgthtalk qcvayyeegy
      121 kvvvdcdlkq cfdtlnhdkl myhleqfiqd kailkvirkf ltsgvinlss eyve
//
LOCUS       WP_258038943             143 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase domain-containing protein, partial
            [Tetragenococcus halophilus].
ACCESSION   WP_258038943
VERSION     WP_258038943.1
KEYWORDS    RefSeq.
SOURCE      Tetragenococcus halophilus
  ORGANISM  Tetragenococcus halophilus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Tetragenococcus.
REFERENCE   1  (residues 1 to 143)
  AUTHORS   Xiong,Y. and Eickbush,T.H.
  TITLE     Origin and evolution of retroelements based upon their reverse
            transcriptase sequences
  JOURNAL   EMBO J 9 (10), 3353-3362 (1990)
   PUBMED   1698615
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00078.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Tetragenococcus halophilus"
                     /db_xref="taxon:51669"
     Protein         <1..>143
                     /product="reverse transcriptase domain-containing protein"
     Region          1..>143
                     /region_name="YkfC"
                     /note="Retron-type reverse transcriptase [Mobilome:
                     prophages, transposons]; COG3344"
                     /db_xref="CDD:442573"
ORIGIN      
        1 dgmdvdevea hiekwyeplr kkllqgtyqp qpvkqveipk sngdkrklgi pcardrvvqq
       61 airqviepii dphflpqshg frlnkgthta lkqcvayyke gyrvvvdcdl kqcfdtlnhd
      121 klmyhleqfi qdkailkvir kfl
//
LOCUS       WP_258038949             553 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Bacillus
            velezensis].
ACCESSION   WP_258038949
VERSION     WP_258038949.1
KEYWORDS    RefSeq.
SOURCE      Bacillus velezensis
  ORGANISM  Bacillus velezensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus amyloliquefaciens group.
REFERENCE   1  (residues 1 to 553)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Bacillus velezensis"
                     /db_xref="taxon:492670"
     Protein         <1..553
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <3..81
                     /region_name="AcpA"
                     /note="Acyl carrier protein/domain [Lipid transport and
                     metabolism, Secondary metabolites biosynthesis, transport
                     and catabolism]; COG3433"
                     /db_xref="CDD:442659"
     Region          89..518
                     /region_name="E_NRPS"
                     /note="Epimerization domain of nonribosomal peptide
                     synthetases (NRPSs); belongs to the Condensation-domain
                     family; cd19534"
                     /db_xref="CDD:380457"
ORIGIN      
        1 ykapetemet llsdiwqevl gldqigvsdn fftlggdsik giqmasrlnq hgyklemkdl
       61 fqhptieelv syvertegkq adqgpvegea altpiqrwff ernftdkhhw nqsvmlhakd
      121 gfdpdlvekt lqaliehhda lrmvyreere giiqtylpvt eckasfeivd lygtdedmlk
      181 sqiqrladhl qgsldlengp llkaeqyrte qgdhlliavh hlvvdgvswr illedfasgy
      241 kqaqqqnsiv lpqkthsfkd waealntfaq seelkkqaay waqadaeelq plpkdhdpnk
      301 rlvkhtaavk celteeetaq lltdvhhpyg teindillsa lgltigewte ngkvginleg
      361 hgreeiipnv nisrtvgwft aqyplilqis kedgvssvik tvketvrrvp dkgvgygilr
      421 ylssdetekg vtpeisfnyl gqfdnevkte wfepspydmg rqvseeseal yalsfsgmvt
      481 ggrfviscsy nqeeyerstv etqmqrfkdn llmiirhcta keekeftpsd fsaqdlemde
      541 mgdifdmlee nlt
//
LOCUS       WP_258038974            1253 aa            linear   BCT 02-MAR-2025
DEFINITION  transglycosylase SLT domain-containing protein [Bacillus sp. Ru63].
ACCESSION   WP_258038974
VERSION     WP_258038974.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. Ru63
  ORGANISM  Bacillus sp. Ru63
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 1253)
  AUTHORS   Koraimann,G.
  TITLE     Lytic transglycosylases in macromolecular transport systems of
            Gram-negative bacteria
  JOURNAL   Cell Mol Life Sci 60 (11), 2371-2388 (2003)
   PUBMED   14625683
REFERENCE   2  (residues 1 to 1253)
  AUTHORS   Mushegian,A.R., Fullner,K.J., Koonin,E.V. and Nester,E.W.
  TITLE     A family of lysozyme-like virulence factors in bacterial pathogens
            of plants and animals
  JOURNAL   Proc Natl Acad Sci U S A 93 (14), 7321-7326 (1996)
   PUBMED   8692991
REFERENCE   3  (residues 1 to 1253)
  AUTHORS   Thunnissen,A.M., Rozeboom,H.J., Kalk,K.H. and Dijkstra,B.W.
  TITLE     Structure of the 70-kDa soluble lytic transglycosylase complexed
            with bulgecin A. Implications for the enzymatic mechanism
  JOURNAL   Biochemistry 34 (39), 12729-12737 (1995)
   PUBMED   7548026
REFERENCE   4  (residues 1 to 1253)
  AUTHORS   Koonin,E.V. and Rudd,K.E.
  TITLE     A conserved domain in putative bacterial and bacteriophage
            transglycosylases
  JOURNAL   Trends Biochem Sci 19 (3), 106-107 (1994)
   PUBMED   8203016
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013618.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01464.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1253
                     /organism="Bacillus sp. Ru63"
                     /db_xref="taxon:2080743"
     Protein         1..1253
                     /product="transglycosylase SLT domain-containing protein"
                     /calculated_mol_wt=135247
     Region          <350..627
                     /region_name="COG5412"
                     /note="Phage-related protein [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:444167"
     Region          801..1125
                     /region_name="SLT"
                     /note="SLT domain protein [Mobilome: prophages,
                     transposons]; COG3953"
                     /db_xref="CDD:443153"
ORIGIN      
        1 mideitktvn ritallrdfe ktytvniiak eklaadkine kkpeekknwf mqtledfgta
       61 fkdkvietil dslfekipgl kkndneanta pgntqsnekv nkrntgqrcc ccccgcggns
      121 sgskvnkryk krksptsart sgrtlrvpge vlrrrqsgts genatsgrns gskfrnwfgg
      181 mrsaatdssk wgkvltplkg lgkfakgipl lgtalaatdl lgmnkenage kvgsfagnlg
      241 gaaaggaaga aigsvvpvvg tavggvvgsi aggiegsdlg ssigkwfddg gaskawdgiq
      301 dgagkavdwi edtwsdfsdw fmdnvwtpvs dwagdkidki tdkfedakkw ltdtwndvss
      361 wfvdnvwtpi yntavpiinl ivgaflfawd giqalwkivs twfmnnvwnp lvdgvtdaad
      421 wiwtkindaw twisdtwstv stwfmdnvwn pisnavatva gwiqahidya riwiqlkwlq
      481 vatwfydnvw npistavsnv anwiwtkine awtfisdlws tvstwfmenv wtpvsdavtn
      541 aanwiwtkln eawtwisdkw savstwfsen vwnpivskve dakksisekf esaitavkda
      601 wkdtkswfqe nvgdplekia dgiktkfedt fwwviklqel agaggrfinn ligrgeeatg
      661 ltiketgkss pgknssgsgg iaglvqsqss aptsifpkqk svleteknat ggyitkptis
      721 wigeagkefv ipvennkgrg kmllsqaask lgmsvvddma sassaggeta vsplasgalv
      781 saavaptvdt sslneqaasf gqrftqgfdq gigdnvvsmd awkqknvgqp mknlisyspn
      841 ygkqvvngya ngqnstatgt dgflqtkvkt pfqntvnkss swgtgtikgf asgqnssqtg
      901 tdqyvnthvn kpflkskess ngwgtgmign fvsgmtskas evheaakela kkvekafree
      961 ldihspsrvm mslgrfasvg vvkgldsvdv kkyaekqags laaaysgmga vggnvkqwlm
     1021 aammatktpl swlpglmtia kfesggnpna inlwdsnaka gnpsqglmqt vpttfnahka
     1081 pgmgnirnpi hnaaaaigyi ksrygsidnv pgiksmkhgg pyvgyanggl itkeqiarvg
     1141 egnkrewiip eergirgryl lqraaqalgm evtdpsqseq selssgqvsa vtsasrptaa
     1201 vsgskeiyiq fngdqhfhng qdaeslaaki kqalidelqk dinigtkgvv afd
//
LOCUS       WP_258039051             347 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ABC transporter substrate-binding protein
            [unclassified Microbacterium].
ACCESSION   WP_258039051
VERSION     WP_258039051.1
KEYWORDS    RefSeq.
SOURCE      unclassified Microbacterium
  ORGANISM  unclassified Microbacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 347)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 347)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 347)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="unclassified Microbacterium"
                     /db_xref="taxon:2609290"
     Protein         1..347
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=37011
     Region          43..336
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(142..143,146,188)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238347"
ORIGIN      
        1 mrlrhlvslt ivplvalalt gcgasevvpa gaatpagnge tsypltienc grtvtvdaap
       61 qrivsldqns teillslgle drivgtaswt dpilpalaea nekvprladn aptyevvlga
      121 dpdfvtasfg rhftqggvat rdrfdetgig sylsptdcdn gvsingggtr ttaltvdaly
      181 qeitemgrif dvsdradklv ddlrsraaaa tagidasgat vafwfadtkt pyvagglgsa
      241 allasttgft nvyadldddw pattwedlvd rdpqvlvlgd lqrdrfpgdr lddkvafles
      301 dpltrtidav rnqryialhg aelnpsirfv dglekieswm aehrdel
//
LOCUS       WP_258039182             451 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar-transfer associated ATP-grasp domain-containing protein
            [Nitrosospira multiformis].
ACCESSION   WP_258039182
VERSION     WP_258039182.1
KEYWORDS    RefSeq.
SOURCE      Nitrosospira multiformis
  ORGANISM  Nitrosospira multiformis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.
REFERENCE   1  (residues 1 to 451)
  AUTHORS   Iyer,L.M., Abhiman,S., Maxwell Burroughs,A. and Aravind,L.
  TITLE     Amidoligases with ATP-grasp, glutamine synthetase-like and
            acetyltransferase-like domains: synthesis of novel metabolites and
            peptide modifications of proteins
  JOURNAL   Mol Biosyst 5 (12), 1636-1660 (2009)
   PUBMED   20023723
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025755.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14397.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Nitrosospira multiformis"
                     /db_xref="taxon:1231"
     Protein         1..451
                     /product="sugar-transfer associated ATP-grasp
                     domain-containing protein"
                     /calculated_mol_wt=49748
     Region          154..406
                     /region_name="CPSase_L_D2"
                     /note="Carbamoyl-phosphate synthase L chain, ATP binding
                     domain; cl17255"
                     /db_xref="CDD:473076"
ORIGIN      
        1 miidritrdl sgaawifarl pedgspamyi hrciqrevws kealgdriim rvalpfvpfi
       61 lavlvavfta ingraikkrt gkglirqiqe qielairfai lppwyyifel hdddkklhag
      121 eylnrletkg glyrflrdnn gglpipaers tgsikdkgrf rarcrahgit tapvffnvaq
      181 ekitavdwgl pelpalpelp erdlfikpvh gqggkkatrw dylgsgqfrr ndgevatgsq
      241 vlerlrhaaf lvqprlvshc eiadlangtl stvrvmtcrn ekgefevtna afrmarnklv
      301 vvdnfhaggi aanvdistgt lgrgtrgawg atgdgwyeqh setgaqiqgr klpcwfelve
      361 lvqyahgaaf sdqvvigwdv alldsgpcim eankapdldi iqrvegvplg nqrlgkllaf
      421 nlmrtveaqh apaagarksa dsslgtqtek p
//
LOCUS       WP_258039112             888 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Microbacterium sp. Ru50].
ACCESSION   WP_258039112
VERSION     WP_258039112.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. Ru50
  ORGANISM  Microbacterium sp. Ru50
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 888)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Microbacterium sp. Ru50"
                     /db_xref="taxon:2080744"
     Protein         1..888
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=93143
     Region          51..308
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     Region          352..882
                     /region_name="PRK09274"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:236443"
ORIGIN      
        1 mvprelpgie ggvsttrvva gvgadagsqr rwhlldtapl leregitpvg tivavhgnpt
       61 wsylwrtlva aslqraragg pawrivavdq lemgysertt ltrglpqrid dlgalidelg
      121 itgtlvtlgh dwggpislgw avrhrdrvda vavlntavhh pagmplpsal rvagarslla
      181 tttvkttafl dttlaladpp lapevraayr apyassglrr gigafvadip atpehpstpa
      241 ldelagglvd ltvpalllrg prdpvfgehh lddlarrlph advhrfegag hmlaeerpya
      301 dvvldwlddn glssgdatda rdagerripa dekdadddar afvpiwqrlf drsddddtav
      361 vdltrrvgge pldvswrela qrvdhlaagf aafgirrgdr vsllvqpgpt ltavlyaclr
      421 igavvvvadr glgirglsra vrgtepafvi geqaglaaar algwpgrris apnlpapaar
      481 algveaslae iatsgsrgav pappsaddea ailftsgstg pakgvvytha qlaalrdtlg
      541 shfdvtpdvg lvtgfapfal lgpalgtrsa tprmdvsapr tltatavaea vrasrarivf
      601 lspaavanvc atadalttdd raalaqvrtf lstgapvsig llrqahelmp eaeahtpygm
      661 tecllvtdvt ldelertqsa pdagvcvgtp igtgtvrisg ldadghatgd lsdtphvtge
      721 ivisaphlkr gyhrlwatdr eavrgtgshp grwhrtgdvg hfdaegrlwv egrlphvvvt
      781 sdgpvtpvgp eqqiervegv rraavvgvgp rgrqvcvavv ettpgarrpg lapsalaeri
      841 raasdsaiaa vlvvpalptd irhnskidrs rlaawaeral agekpsap
//
LOCUS       WP_258039279             207 aa            linear   BCT 02-MAR-2025
DEFINITION  PEP-CTERM sorting domain-containing protein [Nitrosomonas ureae].
ACCESSION   WP_258039279
VERSION     WP_258039279.1
KEYWORDS    RefSeq.
SOURCE      Nitrosomonas ureae
  ORGANISM  Nitrosomonas ureae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.
REFERENCE   1  (residues 1 to 207)
  AUTHORS   Haft,D.H., Paulsen,I.T., Ward,N. and Selengut,J.D.
  TITLE     Exopolysaccharide-associated protein sorting in environmental
            organisms: the PEP-CTERM/EpsH system. Application of a novel
            phylogenetic profiling heuristic
  JOURNAL   BMC Biol 4, 29 (2006)
   PUBMED   16930487
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019225.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07589.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Nitrosomonas ureae"
                     /db_xref="taxon:44577"
     Protein         1..207
                     /product="PEP-CTERM sorting domain-containing protein"
                     /calculated_mol_wt=22412
     Region          34..174
                     /region_name="CLECT"
                     /note="C-type lectin (CTL)/C-type lectin-like (CTLD)
                     domain; cl02432"
                     /db_xref="CDD:470576"
     Site            order(131,135,137,157,159..162,166..168)
                     /site_type="other"
                     /note="ligand binding surface [chemical binding]"
                     /db_xref="CDD:153073"
ORIGIN      
        1 mnkiiinrfa lglmvsgvvg maqaspvqwk tnghyydaip fpegitwvea kimaensvyl
       61 gvnghlatit saaensfiin alggpseldt fflggfqpvg spepggnwqw vtgepwsytn
      121 wasvepndty ggdgiipqpd mvganeevlq fwsgigrwnd veelsywggl iveyptapip
      181 epqtyamlla glgllgfmar rrkesai
//
LOCUS       WP_258039317             216 aa            linear   BCT 02-MAR-2025
DEFINITION  urea transporter [Nitrosomonas ureae].
ACCESSION   WP_258039317
VERSION     WP_258039317.1
KEYWORDS    RefSeq.
SOURCE      Nitrosomonas ureae
  ORGANISM  Nitrosomonas ureae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015226.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03253.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Nitrosomonas ureae"
                     /db_xref="taxon:44577"
     Protein         1..216
                     /product="urea transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015204 - urea transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0071918 - urea transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=23257
     Region          <2..198
                     /region_name="UT"
                     /note="Urea transporter; cl01829"
                     /db_xref="CDD:470365"
ORIGIN      
        1 mlsgvlwial tralrmfnip aatspfvlis wiflmmiyvf dsrtlgstlp ivnmqmivid
       61 igaiplekwl aalmrsigqi vfadnilagg lllvgiaiat lrgafmaisg afigviipml
      121 agvnqgdiea glygfnpvlt miavgwvfle ssgkttllai lagilavlfq lgltnllspl
      181 glpvlaspfi ltlwtilfiv nkfrywfpse kmaein
//
LOCUS       WP_258039337             121 aa            linear   BCT 02-MAR-2025
DEFINITION  rhodanese-like domain-containing protein [Nitrosomonas ureae].
ACCESSION   WP_258039337
VERSION     WP_258039337.1
KEYWORDS    RefSeq.
SOURCE      Nitrosomonas ureae
  ORGANISM  Nitrosomonas ureae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.
REFERENCE   1  (residues 1 to 121)
  AUTHORS   Gliubich,F., Gazerro,M., Zanotti,G., Delbono,S., Bombieri,G. and
            Berni,R.
  TITLE     Active site structural features for chemically modified forms of
            rhodanese
  JOURNAL   J Biol Chem 271 (35), 21054-21061 (1996)
   PUBMED   8702871
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00581.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Nitrosomonas ureae"
                     /db_xref="taxon:44577"
     Protein         1..121
                     /product="rhodanese-like domain-containing protein"
                     /calculated_mol_wt=13359
     Region          10..>115
                     /region_name="PRK08762"
                     /note="molybdopterin-synthase adenylyltransferase MoeB"
                     /db_xref="CDD:236337"
ORIGIN      
        1 mklveearkr ikectvedvq akltegiqfh fidvredhef ltnhaagarh lgkgiierdi
       61 etaipdkntp iilycgggyr salvadtlql mgyksvlslv ggikalrdag fplerninle
      121 k
//
LOCUS       WP_258039338             121 aa            linear   BCT 02-MAR-2025
DEFINITION  surface-adhesin E family protein [Nitrosomonas ureae].
ACCESSION   WP_258039338
VERSION     WP_258039338.1
KEYWORDS    RefSeq.
SOURCE      Nitrosomonas ureae
  ORGANISM  Nitrosomonas ureae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.
REFERENCE   1  (residues 1 to 121)
  AUTHORS   Singh,B., Al-Jubair,T., Morgelin,M., Thunnissen,M.M. and
            Riesbeck,K.
  TITLE     The unique structure of Haemophilus influenzae protein E reveals
            multiple binding sites for host factors
  JOURNAL   Infect Immun 81 (3), 801-814 (2013)
   PUBMED   23275089
REFERENCE   2  (residues 1 to 121)
  AUTHORS   Ronander,E., Brant,M., Eriksson,E., Morgelin,M., Hallgren,O.,
            Westergren-Thorsson,G., Forsgren,A. and Riesbeck,K.
  TITLE     Nontypeable Haemophilus influenzae adhesin protein E:
            characterization and biological activity
  JOURNAL   J Infect Dis 199 (4), 522-531 (2009)
   PUBMED   19125675
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028057.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16747.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Nitrosomonas ureae"
                     /db_xref="taxon:44577"
     Protein         1..121
                     /product="surface-adhesin E family protein"
                     /calculated_mol_wt=13742
ORIGIN      
        1 mtlistsama ewtkvgesnl nggytayadv asiqkagdra kmwalfdyqa vqkasgveyl
       61 serirrdydc kqkqmrklay kffswnmegg dlirsynqpq kwvpvppdsi deaewklacn
      121 n
//
LOCUS       WP_258039345             470 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase [Nitrosomonas ureae].
ACCESSION   WP_258039345
VERSION     WP_258039345.1
KEYWORDS    RefSeq.
SOURCE      Nitrosomonas ureae
  ORGANISM  Nitrosomonas ureae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.
REFERENCE   1  (residues 1 to 470)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 470)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Nitrosomonas ureae"
                     /db_xref="taxon:44577"
     Protein         1..470
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=52340
     Region          13..396
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mqklpeyavi vaialdlgtt sikaalmdhq gilrhivtyp apaidscdgr yesnalqyaa
       61 iaervlkecl aqtqtqnnpp lglcsqrssf llwdkttgep vtpliswqdd rgasccdrlq
      121 vssntihrlt glrltpyylg pklsvllqen pawrqkliqg ewltgtldtf liwrwtgkqh
      181 fitdasmaar tllmdihqqq wsdvlcglfd vprsilsqir pstelgltld nglilqasvg
      241 dqsaaliasl annqsealvn lgtggfvirs fakrevafng ylqtlvyqnr nrqvqfaieg
      301 tlnsiasala pypvneccve dlacndifcl aepsglgapy frndwgihfs qpvtgftsrq
      361 valllleaii frvarileef hqhapltrvy lsgglselpc lqygiaqcvi fpvyhlqqke
      421 aslqgtavlv cgvkatyhre mqeienkqtr sivlmkkyrr wkewldalls
//
LOCUS       WP_258039367              92 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Nitrosomonas ureae].
ACCESSION   WP_258039367
VERSION     WP_258039367.1
KEYWORDS    RefSeq.
SOURCE      Nitrosomonas ureae
  ORGANISM  Nitrosomonas ureae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024736.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13340.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Nitrosomonas ureae"
                     /db_xref="taxon:44577"
     Protein         1..>92
                     /product="transposase"
     Region          2..>91
                     /region_name="transpos_IS5_3"
                     /note="IS5 family transposase; NF033580"
                     /db_xref="CDD:468097"
ORIGIN      
        1 mprqrgnvsh snlqilnail yvtehgckws glpkrfgnwh tiytrmnrwa ksgvlqkvfe
       61 rlqqqqiiri kieavsmdst sikvhpdgtg al
//
LOCUS       WP_258039450              92 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Nitrosomonas ureae].
ACCESSION   WP_258039450
VERSION     WP_258039450.1
KEYWORDS    RefSeq.
SOURCE      Nitrosomonas ureae
  ORGANISM  Nitrosomonas ureae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024736.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13340.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Nitrosomonas ureae"
                     /db_xref="taxon:44577"
     Protein         1..>92
                     /product="transposase"
     Region          2..>91
                     /region_name="transpos_IS5_3"
                     /note="IS5 family transposase; NF033580"
                     /db_xref="CDD:468097"
ORIGIN      
        1 mprqrgnvsh snlqilnail yvtehgckws glpkrfgnwr tiytrmnrwa ksgvlqkvfe
       61 qlqqqqiiri kieavsmdst sikvhpdgtg al
//
LOCUS       WP_258039535             159 aa            linear   BCT 02-MAR-2025
DEFINITION  sodium:solute symporter family transporter [Streptomyces sp. SM1].
ACCESSION   WP_258039535
VERSION     WP_258039535.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012686.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00474.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         1..159
                     /product="sodium:solute symporter family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=16529
     Region          <1..132
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
ORIGIN      
        1 maaeylppvl lavffimivg alsstadsdl aalssimmad vygqnvagke kanprtmllv
       61 grvtmvvata aavafaslqp nildllvfvg alwgalvfpv lasfywdkvt gkaftvsvit
      121 alavflpvrf gwipvdgvfg iavdmlsvvg grwsvsssa
//
LOCUS       WP_258039560             218 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein, partial [Streptomyces sp. SM1].
ACCESSION   WP_258039560
VERSION     WP_258039560.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         <1..>218
                     /product="phosphopantetheine-binding protein"
     Region          <37..214
                     /region_name="PRK06060"
                     /note="p-hydroxybenzoic acid--AMP ligase FadD22"
                     /db_xref="CDD:180374"
     Region          87..172
                     /region_name="PKS_PP"
                     /note="Phosphopantetheine attachment site; smart00823"
                     /db_xref="CDD:214834"
ORIGIN      
        1 drllasltea wasgggpvdw tpwtgtadpd aapfllptyp fqrdrywlpa pgrtaaavpr
       61 tqtepvesga aagvdedtpa vllaarlapl drqarrqavl dlvirhaaav lghpgtgpvr
      121 aersfsevgf dsmlavrfrn vlveatglpv pptvvfdhpt pdalaahlda elsaapapps
      181 pllaeldrla vllaavtpgt agtdgvgerl dallrgwg
//
LOCUS       WP_258039603             167 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: sigma factor-like helix-turn-helix DNA-binding
            protein [unclassified Streptomyces].
ACCESSION   WP_258039603
VERSION     WP_258039603.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 167)
  AUTHORS   Campbell,E.A., Muzzin,O., Chlenov,M., Sun,J.L., Olson,C.A.,
            Weinman,O., Trester-Zedlitz,M.L. and Darst,S.A.
  TITLE     Structure of the bacterial RNA polymerase promoter specificity
            sigma subunit
  JOURNAL   Mol Cell 9 (3), 527-539 (2002)
   PUBMED   11931761
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04545.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..167
                     /product="sigma factor-like helix-turn-helix DNA-binding
                     protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=18295
     Region          102..145
                     /region_name="Sigma70_r4"
                     /note="Sigma-70, region 4; pfam04545"
                     /db_xref="CDD:461347"
ORIGIN      
        1 mhprrtsddt artrefeayv agaggrllht atlltaearn dnprarhlvt lalahtyacw
       61 drlhgedpyd htrqdlaary argawhrhgg llrsrsrptg plaaltpqer lvlvirlyeg
      121 vdgdrtaall glpvervrti fnramatvls parrpapavs gvkavps
//
LOCUS       WP_258039625             106 aa            linear   BCT 02-MAR-2025
DEFINITION  Rv3235 family protein, partial [Streptomyces sp. SM1].
ACCESSION   WP_258039625
VERSION     WP_258039625.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039460.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20060.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         <1..106
                     /product="Rv3235 family protein"
     Region          5..93
                     /region_name="DUF6459"
                     /note="Family of unknown function (DUF6459); pfam20060"
                     /db_xref="CDD:466277"
ORIGIN      
        1 lllavlsgqr pvhamlrhta gqaydelvrl aergplrtrg arpvvrdigw fepregaiea
       61 farigagdrl ramafrleqg rdlrwrctav elggprrhhp hradtr
//
LOCUS       WP_258039586             365 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: fatty acid desaturase [unclassified Streptomyces].
ACCESSION   WP_258039586
VERSION     WP_258039586.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 365)
  AUTHORS   Shen,J., Wu,G., Tsai,A.L. and Zhou,M.
  TITLE     Structure and Mechanism of a Unique Diiron Center in Mammalian
            Stearoyl-CoA Desaturase
  JOURNAL   J Mol Biol 432 (18), 5152-5161 (2020)
   PUBMED   32470559
REFERENCE   2  (residues 1 to 365)
  AUTHORS   Wang,H., Klein,M.G., Zou,H., Lane,W., Snell,G., Levin,I., Li,K. and
            Sang,B.C.
  TITLE     Crystal structure of human stearoyl-coenzyme A desaturase in
            complex with substrate
  JOURNAL   Nat Struct Mol Biol 22 (7), 581-585 (2015)
   PUBMED   26098317
REFERENCE   3  (residues 1 to 365)
  AUTHORS   Lindqvist,Y., Huang,W., Schneider,G. and Shanklin,J.
  TITLE     Crystal structure of delta9 stearoyl-acyl carrier protein
            desaturase from castor seed and its relationship to other di-iron
            proteins
  JOURNAL   EMBO J 15 (16), 4081-4092 (1996)
   PUBMED   8861937
REFERENCE   4  (residues 1 to 365)
  AUTHORS   Shanklin,J. and Somerville,C.
  TITLE     Stearoyl-acyl-carrier-protein desaturase from higher plants is
            structurally unrelated to the animal and fungal homologs
  JOURNAL   Proc Natl Acad Sci U S A 88 (6), 2510-2514 (1991)
   PUBMED   2006187
REFERENCE   5  (residues 1 to 365)
  AUTHORS   Wada,H., Gombos,Z. and Murata,N.
  TITLE     Enhancement of chilling tolerance of a cyanobacterium by genetic
            manipulation of fatty acid desaturation
  JOURNAL   Nature 347 (6289), 200-203 (1990)
   PUBMED   2118597
REFERENCE   6  (residues 1 to 365)
  AUTHORS   Kaestner,K.H., Ntambi,J.M., Kelly,T.J. Jr. and Lane,M.D.
  TITLE     Differentiation-induced gene expression in 3T3-L1 preadipocytes. A
            second differentially expressed gene encoding stearoyl-CoA
            desaturase
  JOURNAL   J Biol Chem 264 (25), 14755-14761 (1989)
   PUBMED   2570068
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012699.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00487.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..365
                     /product="fatty acid desaturase"
                     /EC_number="1.14.19.-"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=39314
ORIGIN      
        1 mrlqrerlnd vtpvllllgh wieftgwcav avyggpwgca vaalagavkf rhlqevshfa
       61 vhgvlarggr lntllaeaav hiplgfvpvs vrrrrhvreh hpnatvtgad pnlaelhsag
      121 lrpgatavry alalihpltp agvhgtvrsv tglrreggtg rlraagpvav saalalafgw
      181 eatafafllp rlllypqlaw msllvehrwf dpeavpgppv aveagrclrl yprnafltll
      241 argtwlpygd lyhfahsahp avrwnylptl ertlcgpayr phalllgesa vlrrhrwala
      301 pasgatigps rqgtaseetg fdacgdpgaa rgrfrgrsvv lcdrargqrl tplarrkaag
      361 ltaep
//
LOCUS       WP_258039626             245 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: D-Ala-D-Ala carboxypeptidase family metallohydrolase
            [unclassified Streptomyces].
ACCESSION   WP_258039626
VERSION     WP_258039626.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019896.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08291.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..245
                     /product="D-Ala-D-Ala carboxypeptidase family
                     metallohydrolase"
                     /calculated_mol_wt=25270
     Region          39..107
                     /region_name="PGRP"
                     /note="Peptidoglycan-binding (PGRP) domain of
                     peptidoglycan hydrolases [Cell wall/membrane/envelope
                     biogenesis]; COG3409"
                     /db_xref="CDD:442635"
     Region          117..231
                     /region_name="Peptidase_M15_3"
                     /note="Peptidase M15; pfam08291"
                     /db_xref="CDD:429903"
ORIGIN      
        1 mfgravrlfl sivmlmagla agavatagta hadgcytwpr tlsqgasgad vtqlqirlgg
       61 ypgqgsvlav dgsfgpataa alkrfqsayg laadgvagpn tfnklyalqd ndctpihfsy
      121 aelnscnstw sggavsaata ksnalrtmwk lealrhalgd qpirvtsgfr shacndavgg
      181 asgsrhlygd aadlgagphs lctlakqarn hgfrgilgpg ypghndhthv dhrgsrywsa
      241 ptcgi
//
LOCUS       WP_258039356             112 aa            linear   BCT 02-MAR-2025
DEFINITION  KfrB domain-containing protein [Nitrosomonas ureae].
ACCESSION   WP_258039356
VERSION     WP_258039356.1
KEYWORDS    RefSeq.
SOURCE      Nitrosomonas ureae
  ORGANISM  Nitrosomonas ureae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.
REFERENCE   1  (residues 1 to 112)
  AUTHORS   Rocker,A., Peschke,M., Kittila,T., Sakson,R., Brieke,C. and
            Meinhart,A.
  TITLE     The ng_zeta1 toxin of the gonococcal epsilon/zeta toxin/antitoxin
            system drains precursors for cell wall synthesis
  JOURNAL   Nat Commun 9 (1), 1686 (2018)
   PUBMED   29703974
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 112)
  AUTHORS   Iyer,L.M., Burroughs,A.M., Anand,S., de Souza,R.F. and Aravind,L.
  TITLE     Polyvalent Proteins, a Pervasive Theme in the Intergenomic
            Biological Conflicts of Bacteriophages and Conjugative Elements
  JOURNAL   J Bacteriol 199 (15), e00245-17 (2017)
   PUBMED   28559295
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 112)
  AUTHORS   Maindola,P., Raina,R., Goyal,P., Atmakuri,K., Ojha,A., Gupta,S.,
            Christie,P.J., Iyer,L.M., Aravind,L. and Arockiasamy,A.
  TITLE     Multiple enzymatic activities of ParB/Srx superfamily mediate
            sexual conflict among conjugative plasmids
  JOURNAL   Nat Commun 5, 5322 (2014)
   PUBMED   25358815
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037106.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18790.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Nitrosomonas ureae"
                     /db_xref="taxon:44577"
     Protein         1..112
                     /product="KfrB domain-containing protein"
                     /calculated_mol_wt=12603
     Region          1..56
                     /region_name="KfrB"
                     /note="KfrB protein; pfam18790"
                     /db_xref="CDD:436739"
ORIGIN      
        1 mngqkilqtq nnnewetvgt ikkvdegikp gvyniyltkt pvdkkqyegq iihidkenav
       61 fyqqvnkdyi vhqlnavegk pvagkdvaim ydgekatlis idtlknkrtl ki
//
LOCUS       WP_258039643             297 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase [Streptomyces sp. NPDC006967].
ACCESSION   WP_258039643
VERSION     WP_258039643.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. NPDC006967
  ORGANISM  Streptomyces sp. NPDC006967
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 297)
  AUTHORS   Urbach,C., Evrard,C., Pudzaitis,V., Fastrez,J., Soumillion,P. and
            Declercq,J.P.
  TITLE     Structure of PBP-A from Thermosynechococcus elongatus, a
            penicillin-binding protein closely related to class A
            beta-lactamases
  JOURNAL   J Mol Biol 386 (1), 109-120 (2009)
   PUBMED   19100272
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024748.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13354.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Streptomyces sp. NPDC006967"
                     /db_xref="taxon:3156906"
     Protein         1..297
                     /product="serine hydrolase"
                     /GO_function="GO:0008800 - beta-lactamase activity
                     [Evidence IEA]"
                     /GO_process="GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=31149
     Region          4..290
                     /region_name="PenP"
                     /note="Beta-lactamase class A [Defense mechanisms];
                     COG2367"
                     /db_xref="CDD:441934"
ORIGIN      
        1 mavtdavari haafadagvt grlhaldids ggqldagadq pvptasvhkl cvlvalheqa
       61 aaglldlter vecppvgrtp gptgvaamld aarlslrdla ylmmavsdna aadlllrrvg
      121 ldavnattar lglprtlavh sfgdllatvr edagpdgara ladprvitrl raldpartnr
      181 stpremtrll aavwrdeact pehgaamrri mglqvwphrl asgfpfddvh vagktgslpt
      241 lrnevgvvey pdggryavav ftrtahtaat lpvadtvigt aariavdalr aarlrsr
//
LOCUS       WP_258039644            1201 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Streptomyces sp. SM1].
ACCESSION   WP_258039644
VERSION     WP_258039644.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 1201)
  AUTHORS   Zhang,Y.L., Arakawa,E. and Leung,K.Y.
  TITLE     Novel Aeromonas hydrophila PPD134/91 genes involved in O-antigen
            and capsule biosynthesis
  JOURNAL   Infect Immun 70 (5), 2326-2335 (2002)
   PUBMED   11953367
  REMARK    Erratum:[Infect Immun 2002 Jun;70(6):3308]
REFERENCE   2  (residues 1 to 1201)
  AUTHORS   Swartley,J.S., Liu,L.J., Miller,Y.K., Martin,L.E., Edupuganti,S.
            and Stephens,D.S.
  TITLE     Characterization of the gene cassette required for biosynthesis of
            the (alpha1-->6)-linked N-acetyl-D-mannosamine-1-phosphate capsule
            of serogroup A Neisseria meningitidis
  JOURNAL   J Bacteriol 180 (6), 1533-1539 (1998)
   PUBMED   9515923
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025025.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13641.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1201
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         1..1201
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=126683
     Region          1..263
                     /region_name="WcaE"
                     /note="Glycosyltransferase, GT2 family [Carbohydrate
                     transport and metabolism]; COG1216"
                     /db_xref="CDD:440829"
     Region          118..317
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
     Region          489..>660
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Region          <655..1136
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
ORIGIN      
        1 mvtavlvshd garwlpdala gllgqerpvq famgadtgsa ddsarlvaea lgddhvlhla
       61 rrtgfgqave ecnrsaphlt pddlpylkrp sgwdpvtrsw rddaydlpel phgepvqwlw
      121 llhddcapep dalarllrvv eneyelgrdd vavvgpklrg wydrrqllev gvsiaasgrr
      181 wtgldrreqd qgqhdhvrpv lsvstagmlv rrdvfdrlgg fdrhlplmrd dvdlcwrahs
      241 aghrvlvapd aavrhaeaas rerrtvdcvg rtsasphkvd kagavyallv ntrtaalpwv
      301 lfrvvlgsll rtlaylvgkv pgqavdeirg lmgtllrper ilagrrhrga pgtdkdemrp
      361 lfpppgatvr vtveqvasdl vgrsdpeavs gagrhgsate sgpggddadf leieqfarlk
      421 rvarkpgpvl flvlllvsla acrqllggga laggallpap adagdlwary tdawhtvgag
      481 gtgsappyla ivaafasllf gstglavtil lvcsvplagl tayfvsrplv psrllrawaa
      541 vayallpaat galaggrigt avlavllpla aragiaasgl taadgtrgsw ratwayavvl
      601 tittaftpiv wpvalvlgig vlalrrtdip ayglrflaql gtpllvlapw slsllpfgff
      661 qeagleygps aasaldllga spggpgtagg plliglvlaa laallrserr tailtawaaa
      721 lvglvfavls nnsawagpat lvygiavlaa avlgadgars rvaeqsfgwr qpvaaliala
      781 cavgplvlaa gwilrgadgp verrdpvqvp afvaeesgts dqartlvlns dsadrvgyvl
      841 vrgsgarmgd aetaavdgen arldkvvanl vagsgadqad elggfavryv lvhqgaprev
      901 trvldatpgl srlsqqagga lwrvdrqvar asivpgkdgg gepvpvaagp veihtevpdg
      961 aegrvlrlad aaaegwtatl dgrplprttv ddwaqgfelp ssggrldvty ddpvthtawl
     1021 wtqgllalvl vvmalpgrrr dvdddlpeep svpaeavage grrarrlraq aeaeaggeea
     1081 aldedlpapp eqppasapvp qqpdhgdwda aryadadhdg stypadqyqq pyatdaygrp
     1141 yqpdpyqqgg eydpyaygtq qqpydptyrg qggydqnypq gydtpydpng tggerpdgsq
     1201 q
//
LOCUS       WP_258039648              93 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY-family carbohydrate kinase, partial [Streptomyces sp. SM1].
ACCESSION   WP_258039648
VERSION     WP_258039648.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 93)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 93)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02782.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         <1..93
                     /product="FGGY-family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <15..68
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 agqpvdvvhv vgggtrnall cqltadacgl pvvagpteaa algnvlvqar ahgrvgdlag
       61 mrrllartqp ltryaprggt qrwraaqarl arg
//
LOCUS       WP_258039650              90 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-L-rhamnosidase C-terminal domain-containing protein
            [Streptomyces sp. SM1].
ACCESSION   WP_258039650
VERSION     WP_258039650.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 90)
  AUTHORS   Zverlov,V.V., Hertel,C., Bronnenmeier,K., Hroch,A., Kellermann,J.
            and Schwarz,W.H.
  TITLE     The thermostable alpha-L-rhamnosidase RamA of Clostridium
            stercorarium: biochemical characterization and primary structure of
            a bacterial alpha-L-rhamnoside hydrolase, a new type of inverting
            glycoside hydrolase
  JOURNAL   Mol Microbiol 35 (1), 173-179 (2000)
   PUBMED   10632887
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17390.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         1..90
                     /product="alpha-L-rhamnosidase C-terminal
                     domain-containing protein"
                     /calculated_mol_wt=9604
     Region          2..66
                     /region_name="Bac_rhamnosid_C"
                     /note="Bacterial alpha-L-rhamnosidase C-terminal domain;
                     pfam17390"
                     /db_xref="CDD:379972"
ORIGIN      
        1 mvrpdartgv nwartsirtv rgpaavswsr iegrlrltvr vpvgstadvh vpaggrsaad
       61 apqgaellrt dpdfvvyrvp hgtweftgqa
//
LOCUS       WP_258039697            1077 aa            linear   BCT 02-MAR-2025
DEFINITION  FtsK/SpoIIIE domain-containing protein [Streptomyces sp. SM1].
ACCESSION   WP_258039697
VERSION     WP_258039697.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 1077)
  AUTHORS   Begg,K.J., Dewar,S.J. and Donachie,W.D.
  TITLE     A new Escherichia coli cell division gene, ftsK
  JOURNAL   J Bacteriol 177 (21), 6211-6222 (1995)
   PUBMED   7592387
REFERENCE   2  (residues 1 to 1077)
  AUTHORS   Wu,L.J. and Errington,J.
  TITLE     Bacillus subtilis SpoIIIE protein required for DNA segregation
            during asymmetric cell division
  JOURNAL   Science 264 (5158), 572-575 (1994)
   PUBMED   8160014
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013727.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01580.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         1..1077
                     /product="FtsK/SpoIIIE domain-containing protein"
                     /GO_function="GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=114062
     Region          2..1037
                     /region_name="T7_EssCb_Firm"
                     /note="type VII secretion protein EssC, C-terminal domain;
                     TIGR03928"
                     /db_xref="CDD:274860"
ORIGIN      
        1 mvgvagdrar alatarwfgv qaavlhsprd lalvmlastp aagadwqwap wlphtgpdqg
       61 qdcvalvgfd setitrrvne llnelarrka sheqnsmtgr lypdptvlmi ldgarllrrv
      121 pgvpqllaeg pqygilalcv dederllpee ckavvawspd aahhvrvrgh gleavgdvla
      181 dqvtpewcel larslapvrd vsrddagsal pssarlltll gmpdptgtdv eriwqaggst
      241 taapvgiaad gpfvldirrd gphalvagtt gagksellqt iitslavanr pdalnyvlid
      301 ykggsafmdc arlphtvgmv sdldahlter alaslaaelh rrerilfdaa tkdiedyndt
      361 rklrpelepm prlvlvidef aslvaelpdf iaglvdiarr grslgvhlvl atqrpagvvs
      421 adirantnlr ialrvtdase sidvieapds gaiakstpgr myvrsgaqsl vgvqsarigg
      481 rrpatggtgp katllplprs aygrplprrt aaeddgtmvt dlavlvdavr dgarrmgfge
      541 qrspwlppls eqvtldelsa ygaesgdaaa pdvapvpygl idiparqsrt plsldlvhge
      601 htmllggars grstalrtla gslarntsph evhlygidcg snallplmrl phvgavvtrd
      661 epdrvrrlie rllaeiarrq qllamegass aaeqrataap edrlpwmvll ldswegfasa
      721 feaynygqli eaaqrifreg savglkvvmt adrtglsghv ssafadrlvl rfadpndyst
      781 aglqprevpk nmppgralri tdtgvdetqi glladdpagq aqvralreia eeaaarhgrv
      841 pagrrplrvd alpsritaad alalepdfaa psplwaligv ggdelrpvgi dleeagpgfv
      901 iagppksgrs tvlvaaaqtl lrsgtpvvlv aprrsplrel egrdgvlgll nadsreddle
      961 elvdnasggs yvvivddael lydtrldeal eavvrkgadg gigliaagst dslsgqyrgf
     1021 avearksrng llltpqspse gelfgirlps nsgggtsgsg lfvaggsfip vqgvmng
//
LOCUS       WP_258039711             395 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein [Aeromonas
            sp. ASNIH8].
ACCESSION   WP_258039711
VERSION     WP_258039711.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas sp. ASNIH8
  ORGANISM  Aeromonas sp. ASNIH8
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 395)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Aeromonas sp. ASNIH8"
                     /db_xref="taxon:1920113"
     Protein         1..395
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=43570
     Region          44..257
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Region          286..>395
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mfrrccrlil lcglafwslm vaaasaqldq snftldelhw lathdelvvg mpsaawppyv
       61 ytdgrgnftg pldgfasqia arlgvslryr ayannaavqq alldgkvdml igvapsptrt
      121 lqmqftselm alpravlltg greslsleea ygvrwvcvfg vsacdellrl gisnlitads
      181 rdeaifmlke gkadaylael pmlnrlqama gmalaridwm rdtslamava prndvlqgll
      241 eraledispl erraileagd ildyalvkrs reivfnpqeq awlqahpvir ygvapdwpgm
      301 sevddrgrlk gliadlltlm sqraglqftl vptrswaqsm alfqdrkldl ipamtptaer
      361 qqfarftpny asinrvvvar qgmaeltaar alkgh
//
LOCUS       WP_258039727              88 aa            linear   BCT 02-MAR-2025
DEFINITION  type I restriction-modification enzyme R subunit C-terminal
            domain-containing protein [Streptomyces sp. SM1].
ACCESSION   WP_258039727
VERSION     WP_258039727.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 88)
  AUTHORS   Makovets,S., Doronina,V.A. and Murray,N.E.
  TITLE     Regulation of endonuclease activity by proteolysis prevents
            breakage of unmodified bacterial chromosomes by type I restriction
            enzymes
  JOURNAL   Proc Natl Acad Sci U S A 96 (17), 9757-9762 (1999)
   PUBMED   10449767
REFERENCE   2  (residues 1 to 88)
  AUTHORS   Murray,N.E., Daniel,A.S., Cowan,G.M. and Sharp,P.M.
  TITLE     Conservation of motifs within the unusually variable polypeptide
            sequences of type I restriction and modification enzymes
  JOURNAL   Mol Microbiol 9 (1), 133-143 (1993)
   PUBMED   8412658
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020052.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08463.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         1..88
                     /product="type I restriction-modification enzyme R subunit
                     C-terminal domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=9686
     Region          <3..81
                     /region_name="HsdR"
                     /note="Type I site-specific restriction endonuclease, part
                     of a restriction-modification system [Defense mechanisms];
                     COG4096"
                     /db_xref="CDD:443272"
ORIGIN      
        1 mdrqaaqkaf evfctgkqls arqldfltli idtvvrrgil slgdlyedaf sdlapggpdd
       61 lftgdeleri kvifkelerr aqpttlaa
//
LOCUS       WP_258039732             198 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein, partial [Streptomyces sp. SM1].
ACCESSION   WP_258039732
VERSION     WP_258039732.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         <1..198
                     /product="phosphopantetheine-binding protein"
     Region          <14..196
                     /region_name="PRK06060"
                     /note="p-hydroxybenzoic acid--AMP ligase FadD22"
                     /db_xref="CDD:180374"
     Region          26..110
                     /region_name="PKS_PP"
                     /note="Phosphopantetheine attachment site; smart00823"
                     /db_xref="CDD:214834"
ORIGIN      
        1 lrglvrpart gtggsaapac smaqqlaelp eaelhrtlld lvrgnaaavl ghsspdlirp
       61 arpfkdvgfd sltgvelrnr lvsstglrlp aalvfdhptp ealarhlaer taaarptcde
      121 avragldtle alldalppeg isdelaarir dvlsrplpgg tppagpaggn addlapevie
      181 aasddemfdy idrqlgsa
//
LOCUS       WP_258039761             164 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6420 family protein [Streptomyces sp. SM1].
ACCESSION   WP_258039761
VERSION     WP_258039761.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 164)
  AUTHORS   Wehmeier,U.F. and Piepersberg,W.
  TITLE     Enzymology of aminoglycoside biosynthesis-deduction from gene
            clusters
  JOURNAL   Methods Enzymol 459, 459-491 (2009)
   PUBMED   19362651
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040410.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19984.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         1..164
                     /product="DUF6420 family protein"
                     /calculated_mol_wt=18167
     Region          2..>66
                     /region_name="DUF6420"
                     /note="Family of unknown function (DUF6420); pfam19984"
                     /db_xref="CDD:437816"
ORIGIN      
        1 mdqdlplihp yapvtpgryv tpgggrhnir paemrahiri tldhmgcpaq ftdeknaayk
       61 rlaraaglvl ehvderpdep atwervfrlw irhaatlvre lgdteaqnml atahcslpll
      121 pgrravlltl rrpaedrspr pgvdtmtgpg hqngghamde rtep
//
LOCUS       WP_258039739             496 aa            linear   BCT 02-MAR-2025
DEFINITION  acyltransferase domain-containing protein, partial [Streptomyces
            sp. SM1].
ACCESSION   WP_258039739
VERSION     WP_258039739.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 496)
  AUTHORS   Serre,L., Verbree,E.C., Dauter,Z., Stuitje,A.R. and Derewenda,Z.S.
  TITLE     The Escherichia coli malonyl-CoA:acyl carrier protein transacylase
            at 1.5-A resolution. Crystal structure of a fatty acid synthase
            component
  JOURNAL   J Biol Chem 270 (22), 12961-12964 (1995)
   PUBMED   7768883
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012901.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00698.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         1..>496
                     /product="acyltransferase domain-containing protein"
     Region          <1..496
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
ORIGIN      
        1 masvplpvdg vreriassdg clsvaavngp sstvvsgdvd vvaelvdgfv aegvrarlie
       61 vdyashsshv eeirerllad lvgvaprsgt vpffstvtgg wldtkvldae ywyrnlretv
      121 efegatrsll dsghrvfiea sahpvlgvav gesveaagvd aavlgtlrrg eggldqvlra
      181 vgrawergla vdwsgafpga rrvelptyaf qrsrywltap apvpaaedrw ddlegqdpar
      241 laeilgvgrd aldevlpala awrsartrer raeswryrvt wtplsvapad glagrwlalc
      301 pegdavaavl dalrdagadl ipcvvagpgt trgelaallt davggqpiag vlsllsweer
      361 thpqhpdlpg gpaltlalaq aledagidar lwtlttgtvv lggaerpgsv gqaasaalgr
      421 taalehphrr gglvdlpevl dtraarrlca vlagavadee qvavrstgih grrlrpapsa
      481 ssgallaaps egrtdg
//
LOCUS       WP_258039755             463 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Streptomyces sp. SM1].
ACCESSION   WP_258039755
VERSION     WP_258039755.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024917.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13527.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         1..463
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /calculated_mol_wt=50329
     Region          29..463
                     /region_name="PRK01346"
                     /note="enhanced intracellular survival protein Eis"
                     /db_xref="CDD:234945"
ORIGIN      
        1 mpalqptrgh stcgrrsktg cspvrvvdam sgmvtevrpp rrdemaayyr tlpfanglph
       61 wepadaawhg gpepwpaqrp pasaeqlekl aaadtaddsf hpiavfvdgr cvggsaaisf
      121 evtvpggrsa kmagvtatgv iaahrrrghl rrmiqamfaa alergeplam lsasegsiyg
      181 rfgfspatyr trweltrhea allpaepdsg slelidavqa rkawprvhag mrarrvgels
      241 ppprhwegls deavgtdgpl rflahrdrhg dvdgianfrl pwsatrdrag tlvvqaleat
      301 npvayralwg llidfdltkt vvapgrprde plrrmltnpr amritretdn lwarlldvpr
      361 altqrsyhtp geltfsitdd ricpanngtw rvtaddsavt cvatdapadl titlpalssl
      421 ylggmsaghl ayaghitqht dgatgrltrm frtdpephns fgf
//
LOCUS       WP_258039825             178 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6262 family protein [unclassified Streptomyces].
ACCESSION   WP_258039825
VERSION     WP_258039825.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 178)
  AUTHORS   Bastos,M.C. and Murphy,E.
  TITLE     Transposon Tn554 encodes three products required for transposition
  JOURNAL   EMBO J 7 (9), 2935-2941 (1988)
   PUBMED   2846290
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040041.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19776.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..178
                     /product="DUF6262 family protein"
                     /calculated_mol_wt=19945
     Region          4..109
                     /region_name="DUF6262"
                     /note="Family of unknown function (DUF6262); pfam19776"
                     /db_xref="CDD:466180"
     Region          76..>174
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
ORIGIN      
        1 mlrearrkds rdkrarvlht ldelltrgep vtfttvakaa gvstwlvyap gvrehiesar
       61 aqqartaasg deprsasgam sirtdlevlr adnqrlrgqv sdlkealqrq lgrqldqlqa
      121 tdltdrigel taqnqelqgq ltqlqhenqe lerrlvesnd dlvaaraslr rmiriens
//
LOCUS       WP_258039769             225 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: molybdopterin-dependent oxidoreductase [unclassified
            Streptomyces].
ACCESSION   WP_258039769
VERSION     WP_258039769.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 225)
  AUTHORS   Kisker,C., Schindelin,H., Pacheco,A., Wehbi,W.A., Garrett,R.M.,
            Rajagopalan,K.V., Enemark,J.H. and Rees,D.C.
  TITLE     Molecular basis of sulfite oxidase deficiency from the structure of
            sulfite oxidase
  JOURNAL   Cell 91 (7), 973-983 (1997)
   PUBMED   9428520
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012401.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00174.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..225
                     /product="molybdopterin-dependent oxidoreductase"
                     /calculated_mol_wt=24335
     Region          45..213
                     /region_name="MsrP"
                     /note="Molybdopterin-dependent catalytic subunit of
                     periplasmic DMSO/TMAO and protein-methionine-sulfoxide
                     reductases [Energy production and conversion]; COG2041"
                     /db_xref="CDD:441644"
ORIGIN      
        1 mllgtlglga lgvvtaptlq rglesflaga sdkdptgltg llpngggfry ysvtssvprk
       61 naetyrltvd glvdrpasyt laelrslpqt rtvrdvqcvt gwrvpdtafe gvrlsrllda
      121 agvrptagav rftcfdgays esltldqarr advlvalrmr dedlghahgg parlyvapmy
      181 fyksakwlsg itvtedvepg yweergydvd awvgrsngrd deptd
//
LOCUS       WP_258039839             573 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Streptomyces sp.
            SM1].
ACCESSION   WP_258039839
VERSION     WP_258039839.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 573)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 573)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 573)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 573)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         1..573
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=60437
     Region          45..563
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
ORIGIN      
        1 mttipkptat taptgeaevs deelkfvipg drrieaanai ttramarrlp qlirrslalg
       61 wqvdraavia llgvqllsgv leafglmatt gvikpliasq hisgdqlrsa vpslavlsga
      121 iglrallgia stalsarlap riareaelel ldaatkaela aydnpgyndr wdaadrgvev
      181 srdllteaqy ilaasaslia safvltavhp illpllllaa lpkgvasvra arisyiasla
      241 ttkdrrllgm lrwymvdkqt adqvrsgtma sflldkyrta garidrttdq atwrsarisl
      301 lggvagglah avvwvalall vfagqisvaa vgtaflalgr vsagldgivg ygaqlfrtgm
      361 ylddwadfid eagghridrg sqtpaaptvv raenitfqyp sadrpalddv slevrrgevv
      421 alvgengsgk ttlskilsal ylpdqgavsw dgtdtrelda hatwkrvavv pqsyacwpls
      481 arenitlgqa teqgdaavla aaqaagadev idglrsglnt llakewwggq elsggqwqri
      541 alarafhrpa gllvldepta aldiysscsp agt
//
LOCUS       WP_258039849             102 aa            linear   BCT 02-MAR-2025
DEFINITION  group II intron maturase-specific domain-containing protein
            [Streptomyces sp. SM1].
ACCESSION   WP_258039849
VERSION     WP_258039849.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 102)
  AUTHORS   Centron,D. and Roy,P.H.
  TITLE     Presence of a group II intron in a multiresistant Serratia
            marcescens strain that harbors three integrons and a novel gene
            fusion
  JOURNAL   Antimicrob Agents Chemother 46 (5), 1402-1409 (2002)
   PUBMED   11959575
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019984.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08388.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         1..102
                     /product="group II intron maturase-specific
                     domain-containing protein"
                     /calculated_mol_wt=12061
     Region          <1..67
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 mkrlrdkvre rtdrrrtgmd irdviadlnp ilrgwgnyfr tgnaadkfqt adryvvwrlh
       61 rlmakkrgrn lrsgqraewt eewfnghgly rlggtirypk aa
//
LOCUS       WP_258039857             116 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase, partial [Streptomyces sp. SM1].
ACCESSION   WP_258039857
VERSION     WP_258039857.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 116)
  AUTHORS   Todone,F., Vanoni,M.A., Mozzarelli,A., Bolognesi,M., Coda,A.,
            Curti,B. and Mattevi,A.
  TITLE     Active site plasticity in D-amino acid oxidase: a crystallographic
            analysis
  JOURNAL   Biochemistry 36 (19), 5853-5860 (1997)
   PUBMED   9153426
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013434.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01266.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         1..>116
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
     Region          39..>103
                     /region_name="DadA"
                     /note="Glycine/D-amino acid oxidase (deaminating) [Amino
                     acid transport and metabolism]; COG0665"
                     /db_xref="CDD:440429"
ORIGIN      
        1 mapsamsrwt kslsearpas fwlddpgrpa pepaltgaet cdllvvgggy sglwtaliak
       61 erdpardvvl vegrevgwaa sgrnggfcaa slthglpngl trwpdeihtl erlgar
//
LOCUS       WP_258039866              49 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6245 family protein [Streptomyces sp. SM1].
ACCESSION   WP_258039866
VERSION     WP_258039866.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 49)
  AUTHORS   Wehmeier,U.F. and Piepersberg,W.
  TITLE     Enzymology of aminoglycoside biosynthesis-deduction from gene
            clusters
  JOURNAL   Methods Enzymol 459, 459-491 (2009)
   PUBMED   19362651
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040364.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19758.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..49
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         1..49
                     /product="DUF6245 family protein"
                     /calculated_mol_wt=4880
ORIGIN      
        1 mdadaravaq gdvdalaaqa epleaareaq etaigntdil lnmltsvgl
//
LOCUS       WP_258039868             393 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing protein, partial [Streptomyces sp. SM1].
ACCESSION   WP_258039868
VERSION     WP_258039868.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 393)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01966.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         <1..>393
                     /product="HD domain-containing protein"
     Region          <1..378
                     /region_name="PRK03381"
                     /note="PII uridylyl-transferase; Provisional"
                     /db_xref="CDD:235123"
ORIGIN      
        1 vlrsravrpr lramlgggrp lgggktaper splaegvveq dgevvlaraa rperdpvlpl
       61 raaaaaaqsg lplslhavrr maagarplpt pwpaeareql vtllgsgppt vqvwealeae
      121 glvnrllpdw ervrcrpqrn avhlwtvdrh lietavrase ftrrvhrpdl llvaallhdi
      181 gkgwpgdhsv ageviardva arigfdrhdv tviatlvrhh lllvetatrr dledpatvra
      241 vaeavasegt lellhaltea dalatgpaaw sswraslvtd lvkrvsavls gdvpddpaaa
      301 aptaeherla leavatgapv lslraqtepp aepsgdpepl gvelliavpd qagvlpavag
      361 vlalhrltvr taelraldlp agvdgsvlll dwr
//
LOCUS       WP_258039932             325 aa            linear   BCT 02-MAR-2025
DEFINITION  FtsK/SpoIIIE domain-containing protein, partial [Streptomyces sp.
            SM1].
ACCESSION   WP_258039932
VERSION     WP_258039932.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 325)
  AUTHORS   Begg,K.J., Dewar,S.J. and Donachie,W.D.
  TITLE     A new Escherichia coli cell division gene, ftsK
  JOURNAL   J Bacteriol 177 (21), 6211-6222 (1995)
   PUBMED   7592387
REFERENCE   2  (residues 1 to 325)
  AUTHORS   Wu,L.J. and Errington,J.
  TITLE     Bacillus subtilis SpoIIIE protein required for DNA segregation
            during asymmetric cell division
  JOURNAL   Science 264 (5158), 572-575 (1994)
   PUBMED   8160014
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013727.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01580.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         <1..325
                     /product="FtsK/SpoIIIE domain-containing protein"
                     /GO_function="GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          1..206
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 lliegavgsg rtellravva slaaaerpdr lgivlvdgrg ggatgaghge glrvctdvph
       61 vtthlgandp vrmrefaqsl saelkrrael lgrsdfaewh tgrelsdrmv aqrtaasrag
      121 aatggqngdl dtppsstlrl rpgagrnrte appplprlvv vvddldalvs palgspgrpa
      181 agsvmralea vardgerlgv hlvtatgpca rtagtepvrq aslrvvldpp vpgggpddpv
      241 pgrgrlarpd gretafqggr vtgriprtat lrptvvplew hrmgdpparr qvrelgngpt
      301 dlallasale raarqvsaae vpsll
//
LOCUS       WP_258039924             160 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Streptomyces sp. SM1].
ACCESSION   WP_258039924
VERSION     WP_258039924.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 160)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 160)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 160)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 160)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         1..>160
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          27..>160
                     /region_name="PotA"
                     /note="ABC-type Fe3+/spermidine/putrescine transport
                     systems, ATPase component [Amino acid transport and
                     metabolism]; COG3842"
                     /db_xref="CDD:443052"
ORIGIN      
        1 mpkkpgkttr padttpgpas pgpatprsva egldahlvvd rgsfrldial taapgevval
       61 lgpngagktt alrtlaglap lthghlrldg adlrrtppes rpvgvvfqdy llfphltald
      121 nvafgprcrg tgkaearaqa aawldrmgla ehggakprhl
//
LOCUS       WP_258039923             487 aa            linear   BCT 02-MAR-2025
DEFINITION  site-specific integrase [Streptomyces sp. SM1].
ACCESSION   WP_258039923
VERSION     WP_258039923.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 487)
  AUTHORS   Subramanya,H.S., Arciszewska,L.K., Baker,R.A., Bird,L.E.,
            Sherratt,D.J. and Wigley,D.B.
  TITLE     Crystal structure of the site-specific recombinase, XerD
  JOURNAL   EMBO J 16 (17), 5178-5187 (1997)
   PUBMED   9311978
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014898.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02899.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         1..487
                     /product="site-specific integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=54683
     Region          18..>190
                     /region_name="XerD"
                     /note="Site-specific recombinase XerD [Replication,
                     recombination and repair]; COG4974"
                     /db_xref="CDD:443999"
ORIGIN      
        1 mlpdprlnlf frvspmtrrk prtwrryama lvvwltflaa vgrrwteatp qdveafkdwr
       61 ltdvrnperi kpgsfdtdra alntfytwas gayalanpvp svppavedgq qgeeigpngg
      121 wrtrdglrps garrrqikwm lraafeqwrd iglrgygfdg lrapgwrgvn edrdavfvdg
      181 lygtglrlqe wasvldvelp vgvdgnfpka wlaaacikgr kkegrtyrip rrvlrdiagy
      241 cdplegsrmq avrraqragr yeqlpfvrvv sgynartrtl riegapegll sldtvgpder
      301 rllfrrtaeg leplalwlap sglpkkpdgw edtfqaanar vaekwvgwta pelegeereh
      361 rmglcplwar phmcrhsfal kwfsllsmvw qpavdgfsar eladlreqfg eiwyalstll
      421 ghddpavtkd vylepftalq vdylmallde deqptvdali rtvaeaggrt llpvaagagv
      481 gregagt
//
LOCUS       WP_258039964             231 aa            linear   BCT 02-MAR-2025
DEFINITION  Stealth CR1 domain-containing protein, partial [Streptomyces sp.
            SM1].
ACCESSION   WP_258039964
VERSION     WP_258039964.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 231)
  AUTHORS   Sperisen,P., Schmid,C.D., Bucher,P. and Zilian,O.
  TITLE     Stealth proteins: in silico identification of a novel protein
            family rendering bacterial pathogens invisible to host immune
            defense
  JOURNAL   PLoS Comput Biol 1 (6), e63 (2005)
   PUBMED   16299590
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028411.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17101.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         1..>231
                     /product="Stealth CR1 domain-containing protein"
     Region          213..>231
                     /region_name="Stealth_CR1"
                     /note="Stealth protein CR1, conserved region 1; pfam17101"
                     /db_xref="CDD:465346"
ORIGIN      
        1 mrqvafdgep lwgrvveefs aagaaaenlg lvadalerag vayfvvpgvs rtswavgvre
       61 adresflasm rglyggsvvf aarprsggvt dfslfaddvw pkalssapvm rfgvvrlgpv
      121 gqvlagpqlg cdvefwqdga dvlagpsaee elarvspqas edvladslva prrnrvadvv
      181 paseqkpati tvegrafptf apftvatvdd vtfpvdvvyt wvdgqdpelr a
//
LOCUS       WP_258039893              92 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: transposase [unclassified Streptomyces].
ACCESSION   WP_258039893
VERSION     WP_258039893.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 92)
  AUTHORS   Mullin,D.A., Zies,D.L., Mullin,A.H., Caballera,N. and Ely,B.
  TITLE     Genetic organization and transposition properties of IS511
  JOURNAL   Mol Gen Genet 254 (4), 456-463 (1997)
   PUBMED   9180700
REFERENCE   2  (residues 1 to 92)
  AUTHORS   Fischer,J., Maier,H., Viell,P. and Altenbuchner,J.
  TITLE     The use of an improved transposon mutagenesis system for DNA
            sequencing leads to the characterization of a new insertion
            sequence of Streptomyces lividans 66
  JOURNAL   Gene 180 (1-2), 81-89 (1996)
   PUBMED   8973350
REFERENCE   3  (residues 1 to 92)
  AUTHORS   Zekri,S. and Toro,N.
  TITLE     Identification and nucleotide sequence of Rhizobium meliloti
            insertion sequence ISRm6, a small transposable element that belongs
            to the IS3 family
  JOURNAL   Gene 175 (1-2), 43-48 (1996)
   PUBMED   8917074
  REMARK    Erratum:[Gene 1997 Mar 25;188(1):149]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01527.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..92
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=10341
     Region          2..82
                     /region_name="InsE"
                     /note="Transposase InsE and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2963"
                     /db_xref="CDD:442203"
ORIGIN      
        1 mreravrmyr ttdpkpqikk lavdlgvhpe alrgwirqae adagerddrl ttderaelva
       61 lrkenaqlkr anevlrtasa lvaaqidptr pr
//
LOCUS       WP_258039966             326 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase [Streptomyces sp. SM1].
ACCESSION   WP_258039966
VERSION     WP_258039966.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         1..326
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=32556
     Region          1..>168
                     /region_name="YbbP"
                     /note="Predicted ABC-type transport system involved in
                     lysophospholipase L1 biosynthesis, permease component
                     [Secondary metabolites biosynthesis, transport and
                     catabolism]; COG3127"
                     /db_xref="CDD:442361"
     Region          <179..291
                     /region_name="Peptidases_S8_S53"
                     /note="Peptidase domain in the S8 and S53 families;
                     cl10459"
                     /db_xref="CDD:415849"
ORIGIN      
        1 mlrlaaqmvr frkgsfvatl valtagvail mtcallvesg wrhqgqpqry gaalavvadr
       61 emtvagptmf geteyttlal pergsvagel tarlaevpgv aravgdrsia vttsaapevp
      121 ttghgwasaa lapyrlvsgg pprsggeiav dtrladragl apgdttdivt agesrpyrvg
      181 gaadpaldaa vqkaiasgvt favaagnesa dagqgsparv pealavasst eddaqsdfsn
      241 fgtavdlyap gsditsawnd sdegtrtisg tsmasphvag aaavymaghp dagpaavaaa
      301 ltggatadri sdpgtgtpnk llkite
//
LOCUS       WP_258040018              51 aa            linear   BCT 02-MAR-2025
DEFINITION  thioesterase domain-containing protein, partial [Streptomyces sp.
            SM1].
ACCESSION   WP_258040018
VERSION     WP_258040018.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 51)
  AUTHORS   Schneider,A. and Marahiel,M.A.
  TITLE     Genetic evidence for a role of thioesterase domains, integrated in
            or associated with peptide synthetases, in non-ribosomal peptide
            biosynthesis in Bacillus subtilis
  JOURNAL   Arch Microbiol 169 (5), 404-410 (1998)
   PUBMED   9560421
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013166.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00975.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..51
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         <1..51
                     /product="thioesterase domain-containing protein"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <1..>44
                     /region_name="GrsT"
                     /note="Surfactin synthase thioesterase subunit [Secondary
                     metabolites biosynthesis, transport and catabolism];
                     COG3208"
                     /db_xref="CDD:442441"
ORIGIN      
        1 alvafevarr ieraggrvdh lfvsgrrgpa tdrpepshpl ddegttggcr g
//
LOCUS       WP_258039998             985 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Streptomyces sp.
            SM1].
ACCESSION   WP_258039998
VERSION     WP_258039998.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 985)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         <1..985
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <5..>953
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
     Region          466..878
                     /region_name="DCL_NRPS"
                     /note="DCL-type Condensation domain of nonribosomal
                     peptide synthetases (NRPSs), which catalyzes the
                     condensation between a D-aminoacyl/peptidyl-PCP donor and
                     a L-aminoacyl-PCP acceptor; cd19543"
                     /db_xref="CDD:380465"
ORIGIN      
        1 rvppalgtdr lrtavdavla rhqalrgrlr edgslavdpa qgtapgtgpr dtvrrvdvsv
       61 taasdeelrr riaacaaeda dslaprdgam vrvtwfdagn erpgrllvtv hhlavdavsw
      121 htvlmdlhta whagasgapv rlgpvplpla ewsgalhraa hgadvvaelp hwhrtldadg
      181 lalteaplsp srdiqatage lrrtlpedlt gqllatvpaa lgarthgvll talalavaar
      241 qrpdpggtsv vmdveghgre alegdadlse tvgwltslyp vrldpgipdw spegtdpasd
      301 drlgeavrrv taqlgrvprh gfgygllrhl npgtaaglaa lptpqlcfny lgrqggsasg
      361 dedwsvapes dvlplgadpr mplthvievn aaveegpagp rlvahwrwar rlltgdeage
      421 ladlwfaalr alvvhgtarp araaqedaae rsrlaarvgh pverllpmtp aqegllfhar
      481 ydsadldvyt vqiametega ldverfrrac dallrrhpml raaflqrrsg epvqavaehv
      541 rmpwrvhdlt glseperdar rtelldadrh hrfdpavppl mrctvlalae drhqlvlsmh
      601 hlladgwsts lllrdllalf dgngdagdlp apgryhdyls wlaaqdrdaa rtawsaalag
      661 lpgptlispg hdtarvrvlp rtltvelset dtatlldtar ghgvtpntlv ravwalclhd
      721 ltgqrdvvfg avvsgreadl pdvaetvgmf vntvpvrvrl dagepvtdll rrmqgeqavl
      781 lphhhlalae vqravgrgpl fnscvvfenf plaqglpspd dglrlaglag hdpyhyplrl
      841 mvapgsrlrl qishradlld egtgeriaar lhelltalpp altaptgrfl rhhapsaasp
      901 dadgrrlcel aaevlgrtav gadddvfdlg adsltalrlt grieaeldvg ldvsavfrhr
      961 tpralaaalt arrggsetap hgrtt
//
LOCUS       WP_258039999             682 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: helix-hairpin-helix domain-containing protein
            [unclassified Streptomyces].
ACCESSION   WP_258039999
VERSION     WP_258039999.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 682)
  AUTHORS   Ramos,C., Hernandez-Tamayo,R., Lopez-Sanz,M., Carrasco,B.,
            Serrano,E., Alonso,J.C., Graumann,P.L. and Ayora,S.
  TITLE     The RecD2 helicase balances RecA activities
  JOURNAL   Nucleic Acids Res 50 (6), 3432-3444 (2022)
   PUBMED   35234892
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025843.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14490.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..682
                     /product="helix-hairpin-helix domain-containing protein"
                     /calculated_mol_wt=69067
     Region          120..206
                     /region_name="HHH_4"
                     /note="Helix-hairpin-helix containing domain; pfam14490"
                     /db_xref="CDD:464187"
     Region          168..673
                     /region_name="RecD"
                     /note="ATPase/5#-3# helicase helicase subunit RecD of the
                     DNA repair enzyme RecBCD (exonuclease V) [Replication,
                     recombination and repair]; COG0507"
                     /db_xref="CDD:440273"
ORIGIN      
        1 msteppetpe dgeptsadaa paegtrvsea eaelaaqrle rerieqrkae rqgpiaagtk
       61 lsgtaadlla avravesgvk paatvfeear paprrpapep vrpapavtpd pvvpaagave
      121 emrgvlaqgg vpeglavraa eelgeggagl lrsdpwqllr isgvrpgqad gfarallgag
      181 agpddgrrgr avagwlleqa alaghtvlem aaladalgrq gvpepegavq daisegdvlv
      241 fqdavgeage deeqpvrvlv gleryamaee sladglarlv nsvpkqdggs eeweraaasa
      301 egsagelvra vaghglvlht ggdaasaepa alldaahglg lrawaathap agrarfaalv
      361 egpgvatvag llsgaegpgr dadgaldldl lvvldapqld veaaalvtes lpdgarlvla
      421 gdpgvlgsvg pgrvfgdlla arvcpqiasr rpgpgplgel vsgigvgelp qvaapgkevv
      481 ivpvrdagea vhrtvqlvad svpraigvpa eetqvitpgh ggavgtraln aalkerlnpg
      541 pgrfggfdpg driayspapg rtlpgrvvta dgeglhlecg geeivvprer vessvrhgwa
      601 ltahqavgcr wpavvvvlpg daaqalsrpw vytafgragr hlsvvhgveq alpravaevt
      661 akprttrlpv llapqvpags gg
//
LOCUS       WP_258040021             224 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin acylase family protein, partial [Streptomyces sp. SM1].
ACCESSION   WP_258040021
VERSION     WP_258040021.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM1
  ORGANISM  Streptomyces sp. SM1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Verhaert,R.M., Riemens,A.M., van der Laan,J.M., van Duin,J. and
            Quax,W.J.
  TITLE     Molecular cloning and analysis of the gene encoding the
            thermostable penicillin G acylase from Alcaligenes faecalis
  JOURNAL   Appl Environ Microbiol 63 (9), 3412-3418 (1997)
   PUBMED   9292993
REFERENCE   2  (residues 1 to 224)
  AUTHORS   Duggleby,H.J., Tolley,S.P., Hill,C.P., Dodson,E.J., Dodson,G. and
            Moody,P.C.
  TITLE     Penicillin acylase has a single-amino-acid catalytic centre
  JOURNAL   Nature 373 (6511), 264-268 (1995)
   PUBMED   7816145
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013927.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01804.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Streptomyces sp. SM1"
                     /db_xref="taxon:402229"
     Protein         <1..>224
                     /product="penicillin acylase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /GO_process="GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
     Region          <45..>224
                     /region_name="Penicil_amidase"
                     /note="Penicillin amidase; pfam01804"
                     /db_xref="CDD:460338"
ORIGIN      
        1 gpegldgggp egldddgpeg ldgggpegld ddgpegldng vsgpagppla valrypprvt
       61 gdlgfaallp llrsrrvadv dravdrwaep vnvimaadtg ggtlhrvagr vplradanrt
      121 rlvpawepdh awqgrheppr agltdgvavm anqrgpaapl gvefapphra eriatllgrq
      181 srwsaadmat ihtdthlasa aplldhlaal dapaltgpaa alrd
//
LOCUS       WP_258040101             795 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: diguanylate cyclase domain-containing protein
            [Aeromonas].
ACCESSION   WP_258040101
VERSION     WP_258040101.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas
  ORGANISM  Aeromonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae.
REFERENCE   1  (residues 1 to 795)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 795)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 795)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 795)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 795)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 795)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 795)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 795)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 795)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Aeromonas"
                     /db_xref="taxon:642"
     Protein         1..795
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=90004
     Region          1..291
                     /region_name="TauA"
                     /note="ABC-type nitrate/sulfonate/bicarbonate transport
                     system, periplasmic component [Inorganic ion transport and
                     metabolism]; COG0715"
                     /db_xref="CDD:440479"
     Region          243..>654
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
     Region          660..787
                     /region_name="COG2703"
                     /note="Hemerythrin [Signal transduction mechanisms]"
                     /db_xref="CDD:442023"
ORIGIN      
        1 miatlttapl radervilql pwqhqfqfag yyaaiakgfy qevglqvtlr eagpgtdvin
       61 evttgraqfg irgsdlllar aagrpvvvla amlqhsplml itlerpdiqt pgdlankrlm
      121 lepgsnellt ylhrytrsrq wdtlpyergv qallrgqada isaysttepf tlqqqgipyr
      181 vfsprdvgyd fygdnlftse nevfnqqerv qrflqaslkg wryamdhpee minlilehyp
      241 sgagrealaf earetralmq pdiiepgymq qdrwqqiart yqeagmikav pnltpflyns
      301 tqaslrqqrq lldrsvaiam lisfsllall gvflhlylrl reeasdrqrl trelaqreqh
      361 yrfvaensgd viwtmdtdsl rfryispaia slsgyepael falslrqllp deswkqlrdg
      421 itasleawqr gdhgqtrcvi hsqlrhkqgh lvaietvttl hgsastrpda ilgvtrdvte
      481 rsareemmrr lafydpltgl anrrllqqrl ketleqapqq plalvfidld hfkpindtfg
      541 hetgdlllkl vaermgecvr eedlvarlgg defvimlpdt dasalavadk lhhclhhpfq
      601 leqqalrisg sigvalypdh gtdpktlmhh adqamyqakh hgrgrvclfs tgqdplpgtl
      661 qwqpahacgh pridadhrql yllanrlleh mqdpgihpda lladmaqife marqhfllee
      721 qvlaqygyee laahrqehqh llkkagqlma aaqagtlgnd allnfiiqel vvghmsqadr
      781 ryfplmktcd areav
//
LOCUS       WP_258040154             132 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: antitoxin Xre/MbcA/ParS toxin-binding
            domain-containing protein [Aeromonas].
ACCESSION   WP_258040154
VERSION     WP_258040154.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas
  ORGANISM  Aeromonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae.
REFERENCE   1  (residues 1 to 132)
  AUTHORS   Zhang,S.P., Feng,H.Z., Wang,Q., Kempher,M.L., Quan,S.W., Tao,X.,
            Niu,S., Wang,Y., Feng,H.Y. and He,Y.X.
  TITLE     Bacterial type II toxin-antitoxin systems acting through
            post-translational modifications
  JOURNAL   Comput Struct Biotechnol J 19, 86-93 (2020)
   PUBMED   33384857
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 132)
  AUTHORS   Freire,D.M., Gutierrez,C., Garza-Garcia,A., Grabowska,A.D.,
            Sala,A.J., Ariyachaokun,K., Panikova,T., Beckham,K.S.H., Colom,A.,
            Pogenberg,V., Cianci,M., Tuukkanen,A., Boudehen,Y.M., Peixoto,A.,
            Botella,L., Svergun,D.I., Schnappinger,D., Schneider,T.R.,
            Genevaux,P., de Carvalho,L.P.S., Wilmanns,M., Parret,A.H.A. and
            Neyrolles,O.
  TITLE     An NAD+ Phosphorylase Toxin Triggers Mycobacterium tuberculosis
            Cell Death
  JOURNAL   Mol Cell 73 (6), 1282-1291 (2019)
   PUBMED   30792174
REFERENCE   3  (residues 1 to 132)
  AUTHORS   Piscotta,F.J., Jeffrey,P.D. and Link,A.J.
  TITLE     ParST is a widespread toxin-antitoxin module that targets
            nucleotide metabolism
  JOURNAL   Proc Natl Acad Sci U S A 116 (3), 826-834 (2019)
   PUBMED   30598453
REFERENCE   4  (residues 1 to 132)
  AUTHORS   Skjerning,R.B., Senissar,M., Winther,K.S., Gerdes,K. and
            Brodersen,D.E.
  TITLE     The RES domain toxins of RES-Xre toxin-antitoxin modules induce
            cell stasis by degrading NAD+
  JOURNAL   Mol Microbiol 111 (1), 221-236 (2019)
   PUBMED   30315706
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021255.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09722.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Aeromonas"
                     /db_xref="taxon:642"
     Protein         1..132
                     /product="antitoxin Xre/MbcA/ParS toxin-binding
                     domain-containing protein"
                     /calculated_mol_wt=14048
     Region          7..130
                     /region_name="COG5642"
                     /note="Uncharacterized conserved protein, DUF2384 family
                     [Function unknown]"
                     /db_xref="CDD:444366"
ORIGIN      
        1 mttlnipqdp lsahlwiiag vapsiihqis glvmtdvgvi crlvgisrgt lsrkvrnktt
       61 lsvsqgervy gviqaldavl flhrnntvra mswlhrpawg lggkrpaevl stalgaqavi
      121 vlvgriqhgv ct
//
LOCUS       WP_258040188             900 aa            linear   BCT 02-MAR-2025
DEFINITION  MucBP domain-containing protein, partial [Listeria monocytogenes].
ACCESSION   WP_258040188
VERSION     WP_258040188.1
KEYWORDS    RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018196.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06458.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Listeria monocytogenes"
                     /db_xref="taxon:1639"
     Protein         <1..900
                     /product="MucBP domain-containing protein"
     Region          18..382
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          80..105
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          106..131
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          132..167
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          168..208
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          209..229
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          230..253
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          254..275
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          276..299
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          396..470
                     /region_name="InlK_D3"
                     /note="Internalin K domain (D3/D4); pfam18981"
                     /db_xref="CDD:408751"
     Region          479..538
                     /region_name="MucBP"
                     /note="MucBP domain; pfam06458"
                     /db_xref="CDD:461917"
     Region          549..609
                     /region_name="MucBP"
                     /note="MucBP domain; pfam06458"
                     /db_xref="CDD:461917"
     Region          622..682
                     /region_name="MucBP"
                     /note="MucBP domain; pfam06458"
                     /db_xref="CDD:461917"
     Region          693..753
                     /region_name="MucBP"
                     /note="MucBP domain; pfam06458"
                     /db_xref="CDD:461917"
     Region          764..824
                     /region_name="MucBP"
                     /note="MucBP domain; pfam06458"
                     /db_xref="CDD:461917"
     Region          860..894
                     /region_name="LPXTG_anchor"
                     /note="LPXTG-motif cell wall anchor domain; TIGR01167"
                     /db_xref="CDD:273478"
ORIGIN      
        1 vqdqpqlvdv ktsdykelsa lttviaknnp elvnlgypim qnvyfsqvas ltkvelvnlp
       61 kvrkvnlern sinelkvtdl aiedlplgen eltdtvfdni qnlpnlktld lsknqleevv
      121 ldktdvenlp nlmtlniqqn laiklinvqd qpqlvdvkts dykelsaltt viaknnpelv
      181 nlgypimqnv yfsqvasltk velanlpkvr avrlernsin qielnnlvsv kdvnlntnki
      241 tndsiekfkg mpilatlnln knqitninml ddfpemttln idlnsvsvlp snlktkmpkl
      301 srisalnqti tldkaivvdd sdliinneis nfgkltdpsp isnfgtyane kitwsserik
      361 nltevsfkfs elinvtgidg tfsgkvtqpf kksttpvina dseihypqgt kkteaeflkd
      421 iqaqttddls iksdfeimvn lkkvgkytvi lnvenmdgik anpkevtvyi davqganitv
      481 kyedksgnkl aensiltgnv geeyssseke ilgytlteip tnaqgefsle eqtvtyiysk
      541 npvpakditv qyidedgiel aptetlsgnv denyvttakt ftgyelietp snaegkfsen
      601 aqtvtyvyra ikadpilake vtvnyqdelg akisetevlt geigetyttv aktidgytli
      661 kspinasgif nenpqtvtyv yqlqnnpita nitvkhlden nnelapsevl sgivdeaytt
      721 npkeikdysl vkvptnasgk ftteaqtviy hykknsiqts syitvkyvde tgkelaisev
      781 lngnindsya ttakeikgyt lvekpanatg kftdqdqtik yvyrantdev nldpdvparn
      841 pngdiqpmng aqppievpks lpktgsqpan lifglgvllv flstqwlhrd krkkdkshnc
//
LOCUS       WP_258040205             270 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing
            protein, partial [Streptomyces sp. SM9].
ACCESSION   WP_258040205
VERSION     WP_258040205.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM9
  ORGANISM  Streptomyces sp. SM9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 270)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02737.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Streptomyces sp. SM9"
                     /db_xref="taxon:1736047"
     Protein         1..>270
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /GO_function="GO:0070403 - NAD+ binding [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
     Region          2..>269
                     /region_name="PRK08268"
                     /note="3-hydroxy-acyl-CoA dehydrogenase; Validated"
                     /db_xref="CDD:236211"
ORIGIN      
        1 mrirvvgagv mgrgiaqwav taghtvelgd arresvdeav afvrqmldra agkgrlgrae
       61 addaarrlvp ldapdapgdg velvieavle dlavktelfr rleevlpata vlatntsslp
      121 vtriaaglre perliglhff npvplmkvae vipgartrpg laeelaktvr asghaavtva
      181 dtpgflinha grglvteala lleeraapve avdriardvl glrmgpfelm dltgldvtsk
      241 vidtiwegfr yserlrpsfl tpnrvaaglh
//
LOCUS       WP_258040216             562 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Streptomyces sp.
            SM9].
ACCESSION   WP_258040216
VERSION     WP_258040216.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM9
  ORGANISM  Streptomyces sp. SM9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 562)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Streptomyces sp. SM9"
                     /db_xref="taxon:1736047"
     Protein         <1..>562
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          13..88
                     /region_name="AcpP"
                     /note="Acyl carrier protein [Lipid transport and
                     metabolism]; COG0236"
                     /db_xref="CDD:440006"
     Region          107..538
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation (C) domain of non-ribosomal
                     peptide synthetases(NRPSs) and similar domains including
                     the C-domain of SgcC5, a free-standing NRPS with both
                     ester- and amide- bond forming activity; cd19531"
                     /db_xref="CDD:380454"
ORIGIN      
        1 vsfptpvead rpapaedttg wlcaaleell gagtpvtpea dyfalggnsi valqlvqrvg
       61 erfghrlkli dtyeyprvad larfidslss agrpavppvv ptdahvlsfg qermwfhhql
      121 dpattlynlp mvsrisgeld idavrgmwed laerhevlrs nlvdedgvpg lrirpelgae
      181 ffhftdvsda pdpvaaarer vrlaaahrfd vardplvrle virtgpkehv vhvtmhhavn
      241 dggsprifer elpelyaarr egrphrldpl pvryrdwahw qrqlvetaal dgeleywkrr
      301 legveplrmp tdharparkd hsgqlhpftv paeligrlrr iaaeesatlf tvlltclyll
      361 larhsgqrdl vvgspttgrt rpelrdligf fnstvalrad lgaatsfghl lkqvrgvvae
      421 alehqevpfd rvvnalvgqr dlsrtplfdv ffvhqelprv qhvgeartdf fdtgrtqenl
      481 fsglppgtak fdltlvtqdr egddamtacl eystelftgr taaaltedyl avlravadgs
      541 rdtpltallt ppatgsepvp ag
//
LOCUS       WP_258040226             112 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Streptomyces sp. SM9].
ACCESSION   WP_258040226
VERSION     WP_258040226.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM9
  ORGANISM  Streptomyces sp. SM9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 112)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 112)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 112)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 112)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Streptomyces sp. SM9"
                     /db_xref="taxon:1736047"
     Protein         <1..112
                     /product="ATP-binding protein"
     Region          <4..88
                     /region_name="ComP"
                     /note="Signal transduction histidine kinase ComP [Signal
                     transduction mechanisms]; COG4585"
                     /db_xref="CDD:443642"
ORIGIN      
        1 vgaaldnvrt hvgpgarawv lvedepdqvl vsvrdegpgi pegrlaeaae egrlgvaqsi
       61 rgrlrdlggt aelvsvpgqg teveltvpkq dqgggeaatg rrypartgeg tq
//
LOCUS       WP_258040256             240 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin-binding protein, partial [Streptomyces sp. SM9].
ACCESSION   WP_258040256
VERSION     WP_258040256.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM9
  ORGANISM  Streptomyces sp. SM9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 240)
  AUTHORS   Sola,M., Kneussel,M., Heck,I.S., Betz,H. and Weissenhorn,W.
  TITLE     X-ray crystal structure of the trimeric N-terminal domain of
            gephyrin
  JOURNAL   J Biol Chem 276 (27), 25294-25301 (2001)
   PUBMED   11325967
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013183.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00994.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Streptomyces sp. SM9"
                     /db_xref="taxon:1736047"
     Protein         <1..240
                     /product="molybdopterin-binding protein"
     Region          <1..240
                     /region_name="MoeA"
                     /note="Molybdopterin Mo-transferase (molybdopterin
                     biosynthesis) [Coenzyme transport and metabolism];
                     COG0303"
                     /db_xref="CDD:440072"
ORIGIN      
        1 gqiydsnsfa laaaakdaga ivyrvgavtd daetlratie dqliradllv ttggvsvgay
       61 dvvkealtsv aeeepegeaa egeegedaeq avhrahvdfr tlamqpgkpq gfgtigpdrt
      121 piltlpgnpv ssyvsfelfv rpairammgl adlhrpvvra tllpphgagd eepapltspe
      181 gkrqflrgty tggerpevrp vggsgshlig alahadaliv lpetvteaaw ggevevvllg
//
LOCUS       WP_258040269             156 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Streptomyces sp.
            SM9].
ACCESSION   WP_258040269
VERSION     WP_258040269.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM9
  ORGANISM  Streptomyces sp. SM9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Streptomyces sp. SM9"
                     /db_xref="taxon:1736047"
     Protein         <1..156
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <1..151
                     /region_name="PRK07064"
                     /note="thiamine pyrophosphate-binding protein"
                     /db_xref="CDD:180820"
ORIGIN      
        1 llelydprdn lfprgggigq glgmgigaal adpsrptlvm agdgglavhl gelltvaqer
       61 prltlvvfnd ggygvlrnmq dahfgrrsgv dlttpdfaal aaavhlpyar igaadeahqv
      121 laeavasdgp vlvevdlaal gpmkspftpp vslpgt
//
LOCUS       WP_258040288             100 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein, partial [Streptomyces
            sp. SM9].
ACCESSION   WP_258040288
VERSION     WP_258040288.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM9
  ORGANISM  Streptomyces sp. SM9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020251.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08667.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Streptomyces sp. SM9"
                     /db_xref="taxon:1736047"
     Protein         1..>100
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
ORIGIN      
        1 mmsteetlrl tvaalmqltr erqpdvaaai gltqpqlsrr qsgksawtlt dcdrlaahwg
       61 mptldllagp thaagclpaa rrpttgaqta mplappasap
//
LOCUS       WP_258040297              58 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6479 family protein, partial [Streptomyces sp. SM9].
ACCESSION   WP_258040297
VERSION     WP_258040297.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM9
  ORGANISM  Streptomyces sp. SM9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039795.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20087.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..58
                     /organism="Streptomyces sp. SM9"
                     /db_xref="taxon:1736047"
     Protein         1..>58
                     /product="DUF6479 family protein"
     Region          5..>53
                     /region_name="DUF6479"
                     /note="Family of unknown function (DUF6479); pfam20087"
                     /db_xref="CDD:466286"
ORIGIN      
        1 myatteaqvl gasesggigw vlgiglavla vavvgmlvwv vrkgiqtrae epeppspe
//
LOCUS       WP_258040308             316 aa            linear   BCT 02-MAR-2025
DEFINITION  iron chelate uptake ABC transporter family permease subunit,
            partial [Streptomyces sp. SM9].
ACCESSION   WP_258040308
VERSION     WP_258040308.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM9
  ORGANISM  Streptomyces sp. SM9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 316)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013219.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01032.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Streptomyces sp. SM9"
                     /db_xref="taxon:1736047"
     Protein         <1..>316
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
     Region          1..>316
                     /region_name="TM_PBP1_branched-chain-AA_like"
                     /note="Transmembrane subunit (TM) of Periplasmic Binding
                     Protein (PBP)-dependent ATP-Binding Cassette (ABC)
                     transporters which are involved in the uptake of
                     branched-chain amino acids (AAs), as well as TMs of
                     transporters involved in the uptake of...; cl00454"
                     /db_xref="CDD:444914"
     Site            order(73,77..79,201..202,204..206,208..209,211..216,
                     218..220,261)
                     /site_type="active"
                     /note="ABC-ATPase subunit interface [active]"
                     /db_xref="CDD:119348"
ORIGIN      
        1 lavlalatvl vglwhltqgt sgvgfgdllg hllgeqhtgg apvgeiftgs rlprlfagva
       61 vgfglgcaga llqsvtrnal aspdtlavta gayftltlva afgltvplwa sgaaafaggl
      121 vaaalvllla graagttgtr lvlagsaiam aldaatgmll ilfnqnttgl fawgsgslaq
      181 lnidaslraf pliaavvcva lalsrrldvm nlgddaastl gvpirttrvv avvcavlltg
      241 tavtlagpis fvglgapvla rliagrvhal srhlllvpaa gllgallill adavlravqg
      301 adgaaaiptg vptall
//
LOCUS       WP_258040309             179 aa            linear   BCT 02-MAR-2025
DEFINITION  RcpC/CpaB family pilus assembly protein, partial [Streptomyces sp.
            SM9].
ACCESSION   WP_258040309
VERSION     WP_258040309.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM9
  ORGANISM  Streptomyces sp. SM9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 179)
  AUTHORS   Tomich,M., Planet,P.J. and Figurski,D.H.
  TITLE     The tad locus: postcards from the widespread colonization island
  JOURNAL   Nat Rev Microbiol 5 (5), 363-375 (2007)
   PUBMED   17435791
REFERENCE   2  (residues 1 to 179)
  AUTHORS   Iyer,L.M. and Aravind,L.
  TITLE     The emergence of catalytic and structural diversity within the
            beta-clip fold
  JOURNAL   Proteins 55 (4), 977-991 (2004)
   PUBMED   15146494
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028286.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16976.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Streptomyces sp. SM9"
                     /db_xref="taxon:1736047"
     Protein         <1..179
                     /product="RcpC/CpaB family pilus assembly protein"
     Region          <60..>114
                     /region_name="CpaB"
                     /note="Flp pilus assembly protein CpaB [Intracellular
                     trafficking, secretion, and vesicular transport,
                     Extracellular structures]; COG3745"
                     /db_xref="CDD:442959"
ORIGIN      
        1 llvgavwwav pgaqasrdap gaeaaggata servevtgtd apaasasaag rfvtapvrla
       61 dggtagllrp gdrvdvlapp pddagggrgp karriascae vlrvpgaavp dgsreagasg
      121 egaageapwp efddpggsrq glvllrvrra taealagaam svpaasgags gtqlvvtvc
//
LOCUS       WP_258040313             329 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin-binding protein, partial [Streptomyces sp. SM9].
ACCESSION   WP_258040313
VERSION     WP_258040313.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM9
  ORGANISM  Streptomyces sp. SM9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 329)
  AUTHORS   Sola,M., Kneussel,M., Heck,I.S., Betz,H. and Weissenhorn,W.
  TITLE     X-ray crystal structure of the trimeric N-terminal domain of
            gephyrin
  JOURNAL   J Biol Chem 276 (27), 25294-25301 (2001)
   PUBMED   11325967
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013183.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00994.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Streptomyces sp. SM9"
                     /db_xref="taxon:1736047"
     Protein         <1..329
                     /product="molybdopterin-binding protein"
     Region          <14..321
                     /region_name="MoeA"
                     /note="Molybdopterin Mo-transferase (molybdopterin
                     biosynthesis) [Coenzyme transport and metabolism];
                     COG0303"
                     /db_xref="CDD:440072"
ORIGIN      
        1 hgrldahggl hperevvhgq dirpraqecr tgdtllpags avtpavlglv aaagydtlav
       61 harptvdlfv lgdelltrgl prdglirdal gpmlphwlre agaevrtver lgdrpdalae
      121 avaaseadlv vttggtaagp vdfvhptler lgadllvdgv avrpghpmll artapgqhlv
      181 glpgnplaav cglltlvvpl lrglagaplr qgaaaghtpg sravpdvyet rrvqlssdpl
      241 vatappgpdv aaptavldap vqghpsdtrl vpvrvdagwa rplsfggpam lrgvatadal
      301 avvvpggaea ghpvellalp wagggggft
//
LOCUS       WP_258040315             320 aa            linear   BCT 02-MAR-2025
DEFINITION  NB-ARC domain-containing protein, partial [Streptomyces sp. SM9].
ACCESSION   WP_258040315
VERSION     WP_258040315.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM9
  ORGANISM  Streptomyces sp. SM9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 320)
  AUTHORS   van der Biezen,E.A. and Jones,J.D.
  TITLE     The NB-ARC domain: a novel signalling motif shared by plant
            resistance gene products and regulators of cell death in animals
  JOURNAL   Curr Biol 8 (7), R226-R227 (1998)
   PUBMED   9545207
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013124.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00931.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Streptomyces sp. SM9"
                     /db_xref="taxon:1736047"
     Protein         1..>320
                     /product="NB-ARC domain-containing protein"
                     /GO_function="GO:0043531 - ADP binding [Evidence IEA]"
     Region          <89..>258
                     /region_name="COG3903"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443109"
ORIGIN      
        1 mggddagvga gvwnsvsggt vfgavvqaqr idslnveapp qvwpprqlpp plpgfvnrtk
       61 errtlrelae aavgqgvrtv vvtglggvgk tqliahcvrs dlgaffpdgq vyvdladvrr
      121 dgavdvagvl gdwlhafgvp yghqpaglgg radlfrtvts gkrvlvvvdn vrqapeiral
      181 tpgdgllvat srtmlpalrm dgavqlvvdp ldereaigiv rgwpvaqseg paaaelvrrc
      241 gglplalrav gewlverpql glddavrsla pfggaagrgw adegtvdvme qvfdsvlrqm
      301 pdhtralyrf lgalpgttfp
//
LOCUS       WP_258040323             139 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6397 family protein, partial [Streptomyces sp. SM9].
ACCESSION   WP_258040323
VERSION     WP_258040323.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM9
  ORGANISM  Streptomyces sp. SM9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 139)
  AUTHORS   Schwartz,D., Berger,S., Heinzelmann,E., Muschko,K., Welzel,K. and
            Wohlleben,W.
  TITLE     Biosynthetic gene cluster of the herbicide phosphinothricin
            tripeptide from Streptomyces viridochromogenes Tu494
  JOURNAL   Appl Environ Microbiol 70 (12), 7093-7102 (2004)
   PUBMED   15574905
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040401.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19934.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Streptomyces sp. SM9"
                     /db_xref="taxon:1736047"
     Protein         1..>139
                     /product="DUF6397 family protein"
     Region          2..>139
                     /region_name="DUF6397"
                     /note="Family of unknown function (DUF6397); pfam19934"
                     /db_xref="CDD:466236"
ORIGIN      
        1 mrqseietav glgllattgr tgepgerpkv paseigrllp svdhpdglra qvattgardg
       61 aallgiteer faklarlgll tpvrchlnry hrivwrylad elravrrhqa phltgqlppp
      121 lrrllatgdd arprtwrrr
//
LOCUS       WP_258040339              67 aa            linear   BCT 02-MAR-2025
DEFINITION  Rv3235 family protein, partial [Streptomyces sp. SM9].
ACCESSION   WP_258040339
VERSION     WP_258040339.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM9
  ORGANISM  Streptomyces sp. SM9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039460.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20060.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Streptomyces sp. SM9"
                     /db_xref="taxon:1736047"
     Protein         <1..67
                     /product="Rv3235 family protein"
     Region          <3..56
                     /region_name="DUF6459"
                     /note="Family of unknown function (DUF6459); pfam20060"
                     /db_xref="CDD:466277"
ORIGIN      
        1 flppgrepav rhcdeyaprd gvveafaris sgervhalaf rlergpdlrw rcaaveadgr
       61 hreraep
//
LOCUS       WP_258040349             208 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase, partial [Streptomyces sp. SM9].
ACCESSION   WP_258040349
VERSION     WP_258040349.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM9
  ORGANISM  Streptomyces sp. SM9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 208)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Streptomyces sp. SM9"
                     /db_xref="taxon:1736047"
     Protein         1..>208
                     /product="PfkB family carbohydrate kinase"
     Region          61..>208
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
ORIGIN      
        1 mvreptpaap hpvrrhpaat rtavcreptd pprpragaah heeyavtaag apaprpttdw
       61 dvvclgesmi tflpdrpgpl aevpsftrai ggaesnvaca laaaghrarw vsrvgadgfg
      121 dhllaavaay gtdttavtrd pdrptglyfr taddrgavrh evayyrhgsa asamspdtvp
      181 yaglaatrvl hltgitaals dgclallr
//
LOCUS       WP_258040352             662 aa            linear   BCT 02-MAR-2025
DEFINITION  polyketide synthase dehydratase domain-containing protein, partial
            [Streptomyces sp. SM9].
ACCESSION   WP_258040352
VERSION     WP_258040352.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM9
  ORGANISM  Streptomyces sp. SM9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 662)
  AUTHORS   Akey,D.L., Razelun,J.R., Tehranisa,J., Sherman,D.H., Gerwick,W.H.
            and Smith,J.L.
  TITLE     Crystal structures of dehydratase domains from the curacin
            polyketide biosynthetic pathway
  JOURNAL   Structure 18 (1), 94-105 (2010)
   PUBMED   20152156
REFERENCE   2  (residues 1 to 662)
  AUTHORS   Keatinge-Clay,A.
  TITLE     Crystal structure of the erythromycin polyketide synthase
            dehydratase
  JOURNAL   J Mol Biol 384 (4), 941-953 (2008)
   PUBMED   18952099
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026115.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14765.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Streptomyces sp. SM9"
                     /db_xref="taxon:1736047"
     Protein         1..>662
                     /product="polyketide synthase dehydratase
                     domain-containing protein"
     Region          <2..660
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
ORIGIN      
        1 mngpdsvvvs gpesevaala vefeaegrkv qrlpvshafh salmepmlda frevarslvy
       61 aeprvplvsh vtgalaepgq ltdpeywvrh vretvrfadg vralaeagad ayleigpggv
      121 ltalarqsld tpddgpgava apalrsrrpe qealltglaq lhvagvrvdw gawftgtgar
      181 rtdlptyawq hrrywprpla haadlpgagl tpaehpllga avslagsegv lltgrvglrt
      241 hpwladhvmg glvlfpataf lelavragdq agcgrvqelt lttplvldpr gaasvqvgvg
      301 ppdaagcrpl aihsrpedaa ddepwtqhat gvlvagarqv afgqsawppa datpvdldgf
      361 yerteygplf qglravwtrd devlaelelp araddaalfg lhpalltaal haveyvelkd
      421 adqgllpfsw sgvtlhasga arlrvritka gedtvsiaav dtagrpvlsv eslalrpsga
      481 arllkpgtdr stllgldwvp aeptgpavag prvalgtdpf gtgtvlaglh evteagtqvl
      541 vpvpdggedp vtatheatra tlalvqewld gprpagarlv fvargvvaar pgdmaanlag
      601 aavwgmvrta qaehpadfsl vdvepgapfp leavlavdep qaavrdgqvl vgrlaqlppp
      661 tp
//
LOCUS       WP_258040374              83 aa            linear   BCT 02-MAR-2025
DEFINITION  S24 family peptidase, partial [Streptomyces sp. SM9].
ACCESSION   WP_258040374
VERSION     WP_258040374.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM9
  ORGANISM  Streptomyces sp. SM9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 83)
  AUTHORS   Bell,C.E., Frescura,P., Hochschild,A. and Lewis,M.
  TITLE     Crystal structure of the lambda repressor C-terminal domain
            provides a model for cooperative operator binding
  JOURNAL   Cell 101 (7), 801-811 (2000)
   PUBMED   10892750
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012920.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00717.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Streptomyces sp. SM9"
                     /db_xref="taxon:1736047"
     Protein         1..>83
                     /product="S24 family peptidase"
     Region          25..>83
                     /region_name="Peptidase_S24_S26"
                     /note="The S24, S26 LexA/signal peptidase superfamily
                     contains LexA-related and type I signal peptidase
                     families. The S24 LexA protein domains include: the lambda
                     repressor CI/C2 family and related bacterial prophage
                     repressor proteins; LexA (EC 3.4.21.88), the...; cl10465"
                     /db_xref="CDD:447902"
     Site            order(30,69)
                     /site_type="active"
                     /note="Catalytic site [active]"
                     /db_xref="CDD:119398"
ORIGIN      
        1 mrrgaagadd paherrgtgr fgvvevdgps mvptlehgdr llvrygarvr pgdvvilrhp
       61 fqqdllvvkr averreggww vlg
//
LOCUS       WP_258040393             532 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein, partial
            [Streptomyces sp. SM9].
ACCESSION   WP_258040393
VERSION     WP_258040393.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM9
  ORGANISM  Streptomyces sp. SM9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Streptomyces sp. SM9"
                     /db_xref="taxon:1736047"
     Protein         1..>532
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          31..532
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
ORIGIN      
        1 marnerrdrs gpgarpghar rvpyadpgvp dhrtplrflw wlttsqrrrv llgslwgtaw
       61 mclliappyl msraiddglr grdagalllw tgallatgav lavlgilrhr tmtrvrvdaa
      121 yrtvqvvtgh vtrlgsalpr qvsagelthl qagdigriaq tltvtgpgvg aaaayavtav
      181 lllgisplla lvvllgvpal altvgpllgr lhgaegryre eqgqltalag dlvaglgvln
      241 giggkrvfaa rhharsqalv plgyrvaalt swvqaltacl lvlflavvtw igarmaaagt
      301 itvgelvavy gyvsallvpv safiegaddl prglvsarrv tdilalappp atgrprldpp
      361 ktpaelydpd sgltvtpgrv talvgvrpee travaerlag hgasavtwgg tplaawdrda
      421 lrrhllladh daylfagdlr talsgrtdrp gdtvraalda aaatdiadgl pdgldghldd
      481 qarnvsggqr qrlrlarall aepevlllve ptsaldahte atvatrlaah rr
//
LOCUS       WP_258040391             109 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding oxidoreductase, partial [Streptomyces sp. SM9].
ACCESSION   WP_258040391
VERSION     WP_258040391.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM9
  ORGANISM  Streptomyces sp. SM9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 109)
  AUTHORS   Lu,G., Campbell,W.H., Schneider,G. and Lindqvist,Y.
  TITLE     Crystal structure of the FAD-containing fragment of corn nitrate
            reductase at 2.5 A resolution: relationship to other flavoprotein
            reductases
  JOURNAL   Structure 2 (9), 809-821 (1994)
   PUBMED   7812715
REFERENCE   2  (residues 1 to 109)
  AUTHORS   Hyde,G.E., Crawford,N.M. and Campbell,W.H.
  TITLE     The sequence of squash NADH:nitrate reductase and its relationship
            to the sequences of other flavoprotein oxidoreductases. A family of
            flavoprotein pyridine nucleotide cytochrome reductases
  JOURNAL   J Biol Chem 266 (35), 23542-23547 (1991)
   PUBMED   1748631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013161.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00970.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Streptomyces sp. SM9"
                     /db_xref="taxon:1736047"
     Protein         1..>109
                     /product="FAD-binding oxidoreductase"
     Region          19..>109
                     /region_name="FNR_like"
                     /note="Ferredoxin reductase (FNR), an FAD and NAD(P)
                     binding protein, was intially identified as a chloroplast
                     reductase activity, catalyzing the electron transfer from
                     reduced iron-sulfur protein ferredoxin to NADP+ as the
                     final step in the electron transport...; cl06868"
                     /db_xref="CDD:447143"
     Site            order(55,69..72,86..88,93..96)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99810"
     Site            order(69,71..72)
                     /site_type="other"
                     /note="conserved FAD binding motif [chemical binding]"
                     /db_xref="CDD:99810"
     Site            order(93,96,99,106)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99810"
ORIGIN      
        1 mdtavpraaq aapprtgwhp lpvtsldrlt edtiaitlev pdglrerfvh rpgahvvvrh
       61 rsggrelrrs ysvcpppedp aalrlvvkrn tsdgfgayal erlaagdll
//
LOCUS       WP_258040405              39 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein, partial [Streptomyces
            sp. SM9].
ACCESSION   WP_258040405
VERSION     WP_258040405.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM9
  ORGANISM  Streptomyces sp. SM9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..39
                     /organism="Streptomyces sp. SM9"
                     /db_xref="taxon:1736047"
     Protein         <1..39
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
     Region          <3..38
                     /region_name="GlxA"
                     /note="Transcriptional regulator GlxA, contains an amidase
                     domain and an AraC-type DNA-binding HTH domain
                     [Transcription]; COG4977"
                     /db_xref="CDD:444002"
ORIGIN      
        1 tpaetatavg ftdqphlnrh ftrivgvtpg ayrrarrag
//
LOCUS       WP_258040430             270 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Streptomyces sp.
            SM9].
ACCESSION   WP_258040430
VERSION     WP_258040430.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM9
  ORGANISM  Streptomyces sp. SM9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 270)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Streptomyces sp. SM9"
                     /db_xref="taxon:1736047"
     Protein         <1..>270
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..270
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 llldgwssaa lltdvvaeya altdggpgaa prgpfrdyld wlagrdhaeg raywrqrlag
       61 ftepvalptd rpapqahrgr starvevplt eaagsdataf arrlrvtpna lvqgawslll
      121 ahhsstrdvv fgatvsgrpa elpgaeeilg lfintlpvrv dtspalrvge wlaaiqrdaa
      181 eagrheyval rdiatelppg tapfdtllvf enypvdpega arhgvrllep eaveatnypl
      241 tliagtaagd tpgstglslt laydpelfda
//
LOCUS       WP_258040477             948 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Streptomyces sp.
            SM9].
ACCESSION   WP_258040477
VERSION     WP_258040477.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM9
  ORGANISM  Streptomyces sp. SM9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 948)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Streptomyces sp. SM9"
                     /db_xref="taxon:1736047"
     Protein         <1..>948
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <2..>930
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
ORIGIN      
        1 tlvngygpte tttfavtgpl taedvasgpa plgtpmddtl ayvldgalrp vpvgvpgely
       61 lggsglargy hgrarltaer fvadphhpgr rlyrtgdltr rrpdgrldfl grtdtqvkir
      121 gyrietaeie tallahpavt qscvlaredr pgtkylaayv vldldqdvag aadltgglra
      181 hlagslpeym vpaaftvvda ipltvngkvd rralpapvlt gdaeaytapa tpteqalaal
      241 wsevlgagri gahddffalg gdsitslkvt srirtalrth ltpralfdhp tvarlaaeid
      301 areeaaeaav tpaprdgllp lsftqerlwf lenftpggve ytvtgalrlt gtvdpgalrt
      361 avaglvdrhe slrttfasva grgvqvvhet mdvpvrtaap adaaaldall raeaaepfdl
      421 tagplvrvll aevpgtgaah gtepehvlvl amhhivtdgw smgivtrels elyaaavrgt
      481 apalpplpvq ypdfavwqrd rlegegldrq lahwrekldg ieplelptdr prpavrtsag
      541 avhsfevpaa lagrlaevar dggaslfmvl tavtqlvlsr ytgqrdiavg tvvsgrerte
      601 lenlvgffvn tlvlrtrida tasfgqlldd vrtttldafa hqdvpfsrli eelaperdts
      661 rtplvqalva lqnapggsfd lpglrvtdqp ipreaaqfel slhfqqgedg glaavaefnt
      721 dlfdaatvaq lcrhwlvlag eaasapalpl aqltmadage pvaadaeapr afrsvvamia
      781 eqaarnprai allhestrlt yaelgrrsdq larhllxlga gperrigisl prtpdlviaa
      841 lavlktgaay vpldpeypad rlrhmredsg vhltvdaalv tealttddsp vphpptapqn
      901 aayviytsgs tgkpkgvvig heamsrlvdw attlgeetfa htffstsl
//
LOCUS       WP_258040500             682 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase domain-containing protein [Aeromonas hydrophila].
ACCESSION   WP_258040500
VERSION     WP_258040500.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas hydrophila
  ORGANISM  Aeromonas hydrophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 682)
  AUTHORS   Rice,P. and Mizuuchi,K.
  TITLE     Structure of the bacteriophage Mu transposase core: a common
            structural motif for DNA transposition and retroviral integration
  JOURNAL   Cell 82 (2), 209-220 (1995)
   PUBMED   7628012
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014911.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02914.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Aeromonas hydrophila"
                     /db_xref="taxon:644"
     Protein         1..682
                     /product="transposase domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=75990
     Region          6..>64
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Region          148..252
                     /region_name="HTH_Tnp_Mu_2"
                     /note="Mu DNA binding, I gamma subdomain; pfam09039"
                     /db_xref="CDD:370256"
     Region          256..481
                     /region_name="DDE_3"
                     /note="DDE superfamily endonuclease; cl46863"
                     /db_xref="CDD:481203"
     Region          495..563
                     /region_name="Mu-transpos_C"
                     /note="Mu transposase, C-terminal; pfam09299"
                     /db_xref="CDD:430512"
ORIGIN      
        1 mfltvkelig lpgmpgtern tltklnklse qkaewrqkra kgkgfeyhid clppetrahl
       61 lhqqvkdlkk gevktrietg seelwltyqe ssekkrqeas rrfevclmva dlverhgmgi
      121 kkamadvaek tgvaasnltr wfyvkpglkr idkgdwlaal idenglntkr raelspeaws
      181 ffqgdwlrsd apsvqacyer ltraaalngw avpsidtikn rikthiplel rvamrggvfk
      241 akqtlapaqr rtrvglhala hvngdgythn lwvalpngei vrpttwffqd vyssmllsyc
      301 vdvsentdml glalhqmvsr ygvpdactld rgsaalsqam tgrmcrpsgr drkhkkfdsa
      361 evegamkalg vdvtwtrvea dtagnkgnar akpierafng ksglgeyvdk hpafnlatvg
      421 dsvekkpahy adsqknaipl etflavlaee ieawnsrtgr rsemarargl syrqvfeesy
      481 sqvsvrkate qqlllclmrt eqcrvneggl ielkagqtpl gernryhssl lypyigtqvs
      541 lrfdpfnlhs gvyaydekgs liglipiled vgyndqrgar lqrlaqeevm grvelmqsta
      601 emmtpaevad qlrnaalkrq kdedesaaqg vapglvqmmp glprlpeqia fkravgcdst
      661 pastadsidf tdtlidlfgk kd
//
LOCUS       WP_258040508             310 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5801 repeats-in-toxin domain-containing protein, partial
            [Aeromonas sp. ASNIH6].
ACCESSION   WP_258040508
VERSION     WP_258040508.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas sp. ASNIH6
  ORGANISM  Aeromonas sp. ASNIH6
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 310)
  AUTHORS   Cirillo,S.L.G., Lum,J. and Cirillo,J.D.
  TITLE     Identification of novel loci involved in entry by Legionella
            pneumophila
  JOURNAL   Microbiology (Reading) 146 (Pt 6), 1345-1359 (2000)
   PUBMED   10846213
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039867.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19116.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Aeromonas sp. ASNIH6"
                     /db_xref="taxon:1758188"
     Protein         <1..>310
                     /product="DUF5801 repeats-in-toxin domain-containing
                     protein"
     Region          1..162
                     /region_name="DUF5801"
                     /note="Domain of unknown function (DUF5801); pfam19116"
                     /db_xref="CDD:465976"
     Region          176..310
                     /region_name="DUF5801"
                     /note="Domain of unknown function (DUF5801); pfam19116"
                     /db_xref="CDD:465976"
ORIGIN      
        1 eddgpragla veapslgatv deslvslggv gsdgvasatl satnvqaqfn pafgadgags
       61 igyslaltgs nvasglyavd paaangqgaa ivlnqvgnvi tgsaggvdyf tltinpstge
      121 vtlalldnvw hgdttnadds valtlgqgvl tlvqtvtdad gdsasaavdl gangvfrfed
      181 dgpraglave apslgasvde slvslggvgs dgvasatlsa tnvqaqfnpa fgadgagsig
      241 yslaltgsnv asglyavdpa aangqgaaiv lnqvgnvitg saggvdyftl tinpstgevt
      301 lalldnvwhg
//
LOCUS       WP_258040525              47 aa            linear   BCT 02-MAR-2025
DEFINITION  Tn3 family transposase [Serratia marcescens].
ACCESSION   WP_258040525
VERSION     WP_258040525.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 47)
  AUTHORS   Yurieva,O. and Nikiforov,V.
  TITLE     Catalytic center quest: comparison of transposases belonging to the
            Tn3 family reveals an invariant triad of acidic amino acid residues
  JOURNAL   Biochem Mol Biol Int 38 (1), 15-20 (1996)
   PUBMED   8932514
REFERENCE   2  (residues 1 to 47)
  AUTHORS   Fennewald,M.A., Gerrard,S.P., Chou,J., Casadaban,M.J. and
            Cozzarelli,N.R.
  TITLE     Purification of the Tn3 transposase and analysis of its binding to
            DNA
  JOURNAL   J Biol Chem 256 (10), 4687-4690 (1981)
   PUBMED   6262296
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013676.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01526.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..47
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         1..47
                     /product="Tn3 family transposase"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=5138
     Region          <2..47
                     /region_name="transpos_Tn3"
                     /note="Tn3 family transposase; NF033527"
                     /db_xref="CDD:468061"
ORIGIN      
        1 mlnkgesrhg vvriiflhql gelhnraaes mayraselnl pvnaivl
//
LOCUS       WP_258040541              68 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF2514 family protein [Citrobacter].
ACCESSION   WP_258040541
VERSION     WP_258040541.1
KEYWORDS    RefSeq.
SOURCE      Citrobacter
  ORGANISM  Citrobacter
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022181.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10721.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Citrobacter"
                     /db_xref="taxon:544"
     Protein         1..68
                     /product="DUF2514 family protein"
                     /calculated_mol_wt=7397
ORIGIN      
        1 mrtdatklar rlnaakhtgn lavpakskta gadvvilsdm lgnfvveaky yaemeeirlf
       61 reskslkt
//
LOCUS       WP_258040571              66 aa            linear   BCT 02-MAR-2025
DEFINITION  YjhX family toxin [Citrobacter braakii].
ACCESSION   WP_258040571
VERSION     WP_258040571.1
KEYWORDS    RefSeq.
SOURCE      Citrobacter braakii
  ORGANISM  Citrobacter braakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (residues 1 to 66)
  AUTHORS   Yamaguchi,Y. and Inouye,M.
  TITLE     Regulation of growth and death in Escherichia coli by
            toxin-antitoxin systems
  JOURNAL   Nat Rev Microbiol 9 (11), 779-790 (2011)
   PUBMED   21927020
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021383.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09857.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Citrobacter braakii"
                     /db_xref="taxon:57706"
     Protein         1..66
                     /product="YjhX family toxin"
                     /calculated_mol_wt=7405
     Region          <2..66
                     /region_name="YjhX_toxin"
                     /note="Putative toxin of bacterial toxin-antitoxin pair;
                     cl01566"
                     /db_xref="CDD:470254"
ORIGIN      
        1 mahvrdtsar vtavecytre gllltdctlv ifkklktkkl iksvndqpyr inttglnnvr
       61 aqldnr
//
LOCUS       WP_417281894             149 aa            linear   BCT 02-MAR-2025
DEFINITION  L,D-transpeptidase family protein [Bacillus salitolerans].
ACCESSION   WP_417281894
VERSION     WP_417281894.1
KEYWORDS    RefSeq.
SOURCE      Bacillus salitolerans
  ORGANISM  Bacillus salitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 149)
  AUTHORS   Mainardi,J.L., Villet,R., Bugg,T.D., Mayer,C. and Arthur,M.
  TITLE     Evolution of peptidoglycan biosynthesis under the selective
            pressure of antibiotics in Gram-positive bacteria
  JOURNAL   FEMS Microbiol Rev 32 (2), 386-408 (2008)
   PUBMED   18266857
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 20844461
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Bacillus salitolerans"
                     /db_xref="taxon:1437434"
     Protein         1..149
                     /product="L,D-transpeptidase family protein"
                     /EC_number="2.3.2.-"
                     /GO_function="GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /GO_function="GO:0071972 - peptidoglycan
                     L,D-transpeptidase activity [Evidence IEA]"
                     /GO_process="GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /calculated_mol_wt=16302
     Region          <3..30
                     /region_name="LysM"
                     /note="Lysin motif; smart00257"
                     /db_xref="CDD:197609"
     Region          45..147
                     /region_name="ErfK"
                     /note="Lipoprotein-anchoring transpeptidase ErfK/SrfK
                     [Cell wall/membrane/envelope biogenesis]; COG1376"
                     /db_xref="CDD:440986"
ORIGIN      
        1 mnyrtsigkl iqansihnpd vlypgqkiii pglpsphsip ysiwislskr tlilyqnmik
       61 rkvypisigk ildqtptgdf iivnrepnpg gpfgamwlsl skihygihgt ndpssigkav
      121 sagcvrmyne dvlelasfvp ngtavyirp
//
LOCUS       WP_258040668             551 aa            linear   BCT 02-MAR-2025
DEFINITION  pseudouridine synthase [Pseudanabaena sp. BC1403].
ACCESSION   WP_258040668
VERSION     WP_258040668.1
KEYWORDS    RefSeq.
SOURCE      Pseudanabaena sp. BC1403
  ORGANISM  Pseudanabaena sp. BC1403
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Pseudanabaenales; Pseudanabaenaceae; Pseudanabaena.
REFERENCE   1  (residues 1 to 551)
  AUTHORS   Wrzesinski,J., Nurse,K., Bakin,A., Lane,B.G. and Ofengand,J.
  TITLE     A dual-specificity pseudouridine synthase: an Escherichia coli
            synthase purified and cloned on the basis of its specificity for
            psi 746 in 23S RNA is also specific for psi 32 in tRNA(phe)
  JOURNAL   RNA 1 (4), 437-448 (1995)
   PUBMED   7493321
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013045.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00849.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Pseudanabaena sp. BC1403"
                     /db_xref="taxon:2043171"
     Protein         1..551
                     /product="pseudouridine synthase"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /GO_process="GO:0001522 - pseudouridine synthesis
                     [Evidence IEA]"
                     /GO_process="GO:0009451 - RNA modification [Evidence IEA]"
                     /calculated_mol_wt=62723
     Region          117..>237
                     /region_name="PRK12704"
                     /note="phosphodiesterase; Provisional"
                     /db_xref="CDD:237177"
     Region          346..550
                     /region_name="RluA"
                     /note="Pseudouridine synthase RluA, 23S rRNA- or
                     tRNA-specific [Translation, ribosomal structure and
                     biogenesis]; COG0564"
                     /db_xref="CDD:440330"
ORIGIN      
        1 mthieeisge ilnasamilg sdhdqdvtyw yegrcpysge vlslprtlqs eaiakvlmqe
       61 lgciyphdie gkmygvllak sltgkrvilk afsgllnges qiegwvppia grekvaiees
      121 itlsklaiik qelielskip erleyekklq eyelkfqvlr dqhqvskqar qlrrtlnnsd
      181 ledldresql ekmarrnfkr drdqvllplk eaissadakm qvlkkqrrel srtlqtqmhs
      241 ayvltnfage trslrelite gamptgmgdc capkllyyaa tnkltpiams efwwgstspd
      301 gykiqgefyg acvercqplm gfllsgrrsp taphvfvslv krdlqiihed ehliaiakpa
      361 gllsvpgryl dtqdsvlsrl rqslgedktl ypvhrldrqt sgillfardl dslrslnhqf
      421 qqrqihkiye avlsgridie qgtidlplwg npenrpfqqv dfergkpsvt efrllenken
      481 ysriefmplt grthqlrvhs adsrglgmti lgdrlygcda atdrlhlhar eltfihprsq
      541 elihlqipvp f
//
LOCUS       WP_258040688             134 aa            linear   BCT 02-MAR-2025
DEFINITION  toxin VasX [Citrobacter braakii].
ACCESSION   WP_258040688
VERSION     WP_258040688.1
KEYWORDS    RefSeq.
SOURCE      Citrobacter braakii
  ORGANISM  Citrobacter braakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042700.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20249.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Citrobacter braakii"
                     /db_xref="taxon:57706"
     Protein         1..134
                     /product="toxin VasX"
                     /calculated_mol_wt=15070
     Region          3..>108
                     /region_name="BTH_I2691_fam"
                     /note="T6SS effector BTH_I2691 family protein; NF041559"
                     /db_xref="CDD:469444"
ORIGIN      
        1 msqgpallpv ryvvipeyik eplpewatsg vsaypvenen yhyalramrr gyiyiyypyl
       61 tdweawsvcd dgslwkqlsa knvlekaepd crqgtysngg kdfltlpyev lesglhscag
      121 qhaepgnavt lwhp
//
LOCUS       WP_258040675             412 aa            linear   BCT 02-MAR-2025
DEFINITION  TetR family transcriptional regulator [Pseudanabaena sp. BC1403].
ACCESSION   WP_258040675
VERSION     WP_258040675.1
KEYWORDS    RefSeq.
SOURCE      Pseudanabaena sp. BC1403
  ORGANISM  Pseudanabaena sp. BC1403
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Pseudanabaenales; Pseudanabaenaceae; Pseudanabaena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012655.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00440.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Pseudanabaena sp. BC1403"
                     /db_xref="taxon:2043171"
     Protein         1..412
                     /product="TetR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=46074
     Region          8..170
                     /region_name="AcrR"
                     /note="DNA-binding protein, AcrR family, includes nucleoid
                     occlusion protein SlmA [Transcription]; COG1309"
                     /db_xref="CDD:440920"
     Region          <214..377
                     /region_name="XerD"
                     /note="Site-specific recombinase XerD [Replication,
                     recombination and repair]; COG4974"
                     /db_xref="CDD:443999"
ORIGIN      
        1 msvsriptrq rivntalelf askgitettt rqiadfaqvn evtlfrhfgn khglllavlq
       61 eclqkylvla qvgeslmvsd issqsdlrrf lkyyiqsslr alesvpelvr slvgeagqyp
      121 lesrqalaqg inqvnqtiat aindvlvnsr lqyslppikl anllntcilg yavitltsdv
      181 qaiwrdrdef vstlvdmfiq evnplaqaqp indisaetvr eillqakkcg vkdyaiayll
      241 fgagltaldi trlrlkdyqh qanhgilitr datgnersvp lnqkilghry gsatnnplsa
      301 ylktrknelk dlkdlknied vaslllssdg kplsleeieq lwerwtqpyr nlngspltid
      361 qarhtwciem lsrgidvdsf ciisgikpke lqayqtrlnq klaidkaial dt
//
LOCUS       WP_258040760             299 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6671 family protein [Pseudanabaena sp. BC1403].
ACCESSION   WP_258040760
VERSION     WP_258040760.1
KEYWORDS    RefSeq.
SOURCE      Pseudanabaena sp. BC1403
  ORGANISM  Pseudanabaena sp. BC1403
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Pseudanabaenales; Pseudanabaenaceae; Pseudanabaena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042729.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20376.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Pseudanabaena sp. BC1403"
                     /db_xref="taxon:2043171"
     Protein         1..299
                     /product="DUF6671 family protein"
                     /calculated_mol_wt=33691
     Region          82..299
                     /region_name="DUF6671"
                     /note="Domain of unknown function (DUF6671); pfam20376"
                     /db_xref="CDD:466525"
ORIGIN      
        1 mtsnspilsp tgrgeqgnpi efrdrlmvia tmhrkelaia pivqtslgvr vtvpqdfnsd
       61 lfgtftrdid rpanqvetak lkaekaleli nadlsiaseg sffphpilgi pynreivfll
      121 dkkhnfnvyg eclstdtnfr hqeissyeqa ydfalkigfp dhaivlmpda ttsakeaiyk
      181 gitsenllkv svrellkqsp qihietdmrs lynptrmsni akateelvrk lqqlcpncnf
      241 vnfdvaerlr glpcelcglp tqvtrahvyr cdrcqfqqev lfpdevqtad pmycsycnp
//
LOCUS       WP_258040835             160 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Pseudanabaena sp.
            BC1403].
ACCESSION   WP_258040835
VERSION     WP_258040835.1
KEYWORDS    RefSeq.
SOURCE      Pseudanabaena sp. BC1403
  ORGANISM  Pseudanabaena sp. BC1403
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Pseudanabaenales; Pseudanabaenaceae; Pseudanabaena.
REFERENCE   1  (residues 1 to 160)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 160)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Pseudanabaena sp. BC1403"
                     /db_xref="taxon:2043171"
     Protein         1..160
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=17216
     Region          <1..159
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(38,66,78,82)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mdllvnnayg gvrslisssg kpfweadinl wdacnqvglr nhhvashfaa kmttkrkqgl
       61 ivtisswggl apifgvaygt sksacdrlaa dmavelkpfn iasislwpgi vgteqfhqla
      121 denhegnlgv aaisdkfnwe tplfvgrvia slcndpdlmm
//
LOCUS       WP_258040865             327 aa            linear   BCT 02-MAR-2025
DEFINITION  Eco57I restriction-modification methylase domain-containing protein
            [Pseudanabaena sp. BC1403].
ACCESSION   WP_258040865
VERSION     WP_258040865.1
KEYWORDS    RefSeq.
SOURCE      Pseudanabaena sp. BC1403
  ORGANISM  Pseudanabaena sp. BC1403
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Pseudanabaenales; Pseudanabaenaceae; Pseudanabaena.
REFERENCE   1  (residues 1 to 327)
  AUTHORS   Schluckebier,G., Kozak,M., Bleimling,N., Weinhold,E. and Saenger,W.
  TITLE     Differential binding of S-adenosylmethionine S-adenosylhomocysteine
            and Sinefungin to the adenine-specific DNA methyltransferase M.TaqI
  JOURNAL   J Mol Biol 265 (1), 56-67 (1997)
   PUBMED   8995524
REFERENCE   2  (residues 1 to 327)
  AUTHORS   Janulaitis,A., Vaisvila,R., Timinskas,A., Klimasauskas,S. and
            Butkus,V.
  TITLE     Cloning and sequence analysis of the genes coding for Eco57I type
            IV restriction-modification enzymes
  JOURNAL   Nucleic Acids Res 20 (22), 6051-6056 (1992)
   PUBMED   1334261
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019291.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07669.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Pseudanabaena sp. BC1403"
                     /db_xref="taxon:2043171"
     Protein         1..327
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=36574
     Region          2..325
                     /region_name="YtxK"
                     /note="Adenine-specific DNA N6-methylase [Replication,
                     recombination and repair]; COG0827"
                     /db_xref="CDD:440589"
ORIGIN      
        1 myqpifeitp eieqhfdssl rvkaeatvaa ialsksissa taeqqvelak asgwgtltdi
       61 wvkanhlgnt wqyrchekls qlltqaeiqa aksatatayq tsfeviramw dilsdigftg
      121 gaivepacnt lafmgcqpal mrersqwvgv eldpifaqia rllypealiy aqgfetvsls
      181 dnsfdlaign vpfgnyklyd pryahlnlsi hnyflakctd lvrengliam itscftldaa
      241 nnsfrkylan klelvtairl pdiafkrfan tevvadilif rkltetelra tnqknyqypd
      301 wvktapsgkh tvnqqpimin qwfveva
//
LOCUS       WP_258040869             216 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_258040869
VERSION     WP_258040869.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>216
                     /product="Ig-like domain-containing protein"
     Region          <45..215
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 mrtvirivir iqiqggdpls aaknitvtdd velhtgsipn ggltndatpt isgtaqagtt
       61 vtiydgttvl gkvvvgadgk wsftlpklsd gehslsttvs dtkghtsghs pdfvltvdtt
      121 vapvsdlqvt ddvaqhtgpl tsggltndat palsgtaeag stvtiydgst vlgtavaded
      181 ghwrftpdpl gegehrlstt vtdvagntsg hspdfv
//
LOCUS       WP_258040875             106 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Pseudanabaena sp. BC1403].
ACCESSION   WP_258040875
VERSION     WP_258040875.1
KEYWORDS    RefSeq.
SOURCE      Pseudanabaena sp. BC1403
  ORGANISM  Pseudanabaena sp. BC1403
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae;
            Pseudanabaenales; Pseudanabaenaceae; Pseudanabaena.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024975.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13586.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Pseudanabaena sp. BC1403"
                     /db_xref="taxon:2043171"
     Protein         1..106
                     /product="transposase"
                     /calculated_mol_wt=12425
     Region          <3..98
                     /region_name="transpos_IS5_3"
                     /note="IS5 family transposase; NF033580"
                     /db_xref="CDD:468097"
ORIGIN      
        1 mrlleslkyp lsrlqkilvd kgfsgeditq wvkdnfdciw evstraeeqk gfvveskrwv
       61 vertfawigk yrrlskdcef yenisepfiy lalirkmlgn ptavns
//
LOCUS       WP_258040886             425 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein [Vibrio parahaemolyticus].
ACCESSION   WP_258040886
VERSION     WP_258040886.1
KEYWORDS    RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 425)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Vibrio parahaemolyticus"
                     /db_xref="taxon:670"
     Protein         1..425
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=48731
     Region          27..>259
                     /region_name="UvrD"
                     /note="Superfamily I DNA or RNA helicase [Replication,
                     recombination and repair]; COG0210"
                     /db_xref="CDD:439980"
ORIGIN      
        1 mattgldlek lskeakevfk likdkkhfll sggagsgkty slveilrali ndspsvniac
       61 itytnaavse iedrvlhdnl hvstihdflw dniknfqfei kqtlielind peqtiinssd
      121 kemvddsffd dceliqykey vriangiish devivlatkm fekyerlcsi vkdkypfifv
      181 deyqdtnpmv vkilleymek snksnvvgff gdamqsiydg svgnldmytk seppivyevf
      241 kkqnrrnplq vinlanlirt dgleqqpsdd qsapnmdkng kvkqgeikfl ystsdslkpv
      301 rqhlgwdfnc atsvkelnlt hsliadkanf pelmriydkd kileyirnkv kkplvenepd
      361 ydstgktlaq vlehvgnpnp tptqrtyien npkyfelaks lpydhiskly vdkdqllddk
      421 kklrr
//
LOCUS       WP_258040972             222 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Lysinibacillus
            sphaericus].
ACCESSION   WP_258040972
VERSION     WP_258040972.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus sphaericus
  ORGANISM  Lysinibacillus sphaericus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Lysinibacillus sphaericus"
                     /db_xref="taxon:1421"
     Protein         1..>222
                     /product="ABC transporter substrate-binding protein"
     Region          37..>222
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mrklssflli falsivaacg nledkkqsts snpksvltms wvkdigqvnp hmyapnelfa
       61 qamlydplvs ygedgkiqpa laaewemtad gksytftlrd dvmysdgskl taenvkrnid
      121 tvvensaahs wlevvavidn veivderqvk inlkepyypf lqelslirpl rmladsgfpa
      181 sgttkdgiak pigsgpwilt dyqqdsfaef trnenywgek pk
//
LOCUS       WP_258041015             193 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Lysinibacillus sphaericus].
ACCESSION   WP_258041015
VERSION     WP_258041015.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus sphaericus
  ORGANISM  Lysinibacillus sphaericus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 193)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Lysinibacillus sphaericus"
                     /db_xref="taxon:1421"
     Protein         1..>193
                     /product="AMP-binding protein"
     Region          11..>193
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(146,149..154,156..157)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341286"
ORIGIN      
        1 mfaeqawiln rasltpnrla lvnletneqw tyrqltleia kwshffenqg lqagsrvavf
       61 srnnshlfai lfacglrgli yvplnwrlst eelndivada tpslllydqg ipcplqlatm
      121 hpiqqvlpsa tiassieldl nepwlmiytg gttgkakgvv lsfnsvnwna intiiswglc
      181 eddctlnymp mfh
//
LOCUS       WP_258041020              85 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase, partial [Lysinibacillus sphaericus].
ACCESSION   WP_258041020
VERSION     WP_258041020.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus sphaericus
  ORGANISM  Lysinibacillus sphaericus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 85)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 85)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Lysinibacillus sphaericus"
                     /db_xref="taxon:1421"
     Protein         1..>85
                     /product="MBL fold metallo-hydrolase"
     Region          12..>84
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
ORIGIN      
        1 meraqkiapn ffcidthdln rkertsayll idekialiet saspsvpyii eglnelqftl
       61 ddidyvivth ihldhaggag lflqs
//
LOCUS       WP_258041032             191 aa            linear   BCT 02-MAR-2025
DEFINITION  imelysin family protein, partial [Lysinibacillus sphaericus].
ACCESSION   WP_258041032
VERSION     WP_258041032.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus sphaericus
  ORGANISM  Lysinibacillus sphaericus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 191)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020932.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09375.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Lysinibacillus sphaericus"
                     /db_xref="taxon:1421"
     Protein         1..>191
                     /product="imelysin family protein"
     Region          7..>191
                     /region_name="EfeO"
                     /note="Iron uptake system EfeUOB, periplasmic (or
                     lipoprotein) component EfeO/EfeM [Inorganic ion transport
                     and metabolism]; COG2822"
                     /db_xref="CDD:442070"
ORIGIN      
        1 mknksllsvl vaggiimagc gntedtkkee kpateqaeqt atvdlttels ayqqfaleqm
       61 dhflldtekf vnlfkagdie gakaayapar myfersepia esfgdldpri dgrladieee
      121 gkgkeewtgy hkleyalwve nttkgyeava dqlladakel halvqtvevt pdlmitgavd
      181 llnevstski t
//
LOCUS       WP_258040998              90 aa            linear   BCT 02-MAR-2025
DEFINITION  LD-carboxypeptidase, partial [Lysinibacillus sphaericus].
ACCESSION   WP_258040998
VERSION     WP_258040998.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus sphaericus
  ORGANISM  Lysinibacillus sphaericus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 90)
  AUTHORS   Korza,H.J. and Bochtler,M.
  TITLE     Pseudomonas aeruginosa LD-carboxypeptidase, a serine peptidase with
            a Ser-His-Glu triad and a nucleophilic elbow
  JOURNAL   J Biol Chem 280 (49), 40802-40812 (2005)
   PUBMED   16162494
REFERENCE   2  (residues 1 to 90)
  AUTHORS   Templin,M.F., Ursinus,A. and Holtje,J.V.
  TITLE     A defect in cell wall recycling triggers autolysis during the
            stationary growth phase of Escherichia coli
  JOURNAL   EMBO J 18 (15), 4108-4117 (1999)
   PUBMED   10428950
REFERENCE   3  (residues 1 to 90)
  AUTHORS   Gonzalez-Pastor,J.E., San Millan,J.L., Castilla,M.A. and Moreno,F.
  TITLE     Structure and organization of plasmid genes required to produce the
            translation inhibitor microcin C7
  JOURNAL   J Bacteriol 177 (24), 7131-7140 (1995)
   PUBMED   8522520
REFERENCE   4  (residues 1 to 90)
  AUTHORS   Guijarro,J.I., Gonzalez-Pastor,J.E., Baleux,F., San Millan,J.L.,
            Castilla,M.A., Rico,M., Moreno,F. and Delepierre,M.
  TITLE     Chemical structure and translation inhibition studies of the
            antibiotic microcin C7
  JOURNAL   J Biol Chem 270 (40), 23520-23532 (1995)
   PUBMED   7559516
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014114.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02016.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Lysinibacillus sphaericus"
                     /db_xref="taxon:1421"
     Protein         1..>90
                     /product="LD-carboxypeptidase"
     Region          12..>90
                     /region_name="Peptidase_S66"
                     /note="LD-Carboxypeptidase, a serine protease, includes
                     microcin C7 self immunity protein; cl00700"
                     /db_xref="CDD:469883"
ORIGIN      
        1 mikyprlekd atigvtapss gvpeglheif kqscerlksk gfhiicgdtv wtqekaksas
       61 tekradefne mmsadhinii ippwggelli
//
LOCUS       WP_258041054             324 aa            linear   BCT 02-MAR-2025
DEFINITION  ribonuclease H-like domain-containing protein, partial
            [Lysinibacillus sphaericus].
ACCESSION   WP_258041054
VERSION     WP_258041054.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus sphaericus
  ORGANISM  Lysinibacillus sphaericus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13482.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Lysinibacillus sphaericus"
                     /db_xref="taxon:1421"
     Protein         <1..324
                     /product="ribonuclease H-like domain-containing protein"
     Region          8..192
                     /region_name="YprB"
                     /note="Uncharacterized conserved protein YprB, contains
                     RNaseH-like and TPR domains [General function prediction
                     only]; COG3359"
                     /db_xref="CDD:442587"
     Region          192..221
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(193,196..197,200..201,203,229,232..233,236..237,
                     239..240,265,268..269,272..273,277)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          202..>287
                     /region_name="CpoB"
                     /note="Cell division protein CpoB, coordinates
                     peptidoglycan biosynthesis and outer membrane constriction
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG1729"
                     /db_xref="CDD:441335"
     Region          226..258
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 pyaldvdenv lffdtettgl kgvgtqifll gflevtkhdf vltqyvladp aheaallfes
       61 rlwqktatii tyngksfdwp qletrwtlnq kvlpklrtqr qidllhsskr lwkndmerlk
      121 lksveeeklg fsrvgdipgh lapiiyldav ksgvpdalmk vlvhnewdll slitlyvhst
      181 yllfeqssde santytnigk wyadlkkrpq svnvlekvta qfdareagna qfylamqlkk
      241 nkqyseavda fvaslhfiep rkklqaleql aiiyehhlkd mkqalvytle giqlitsted
      301 wrmeqkqkwe iswekrlhrl gnkq
//
LOCUS       WP_258041056             157 aa            linear   BCT 02-MAR-2025
DEFINITION  multicopper oxidase domain-containing protein, partial
            [Lysinibacillus sphaericus].
ACCESSION   WP_258041056
VERSION     WP_258041056.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus sphaericus
  ORGANISM  Lysinibacillus sphaericus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Page,C.C., Moser,C.C., Chen,X. and Dutton,P.L.
  TITLE     Natural engineering principles of electron tunnelling in biological
            oxidation-reduction
  JOURNAL   Nature 402 (6757), 47-52 (1999)
   PUBMED   10573417
REFERENCE   2  (residues 1 to 157)
  AUTHORS   Grossmann,J.G., Ingledew,W.J., Harvey,I., Strange,R.W. and
            Hasnain,S.S.
  TITLE     X-ray absorption studies and homology modeling define the
            structural features that specify the nature of the copper site in
            rusticyanin
  JOURNAL   Biochemistry 34 (26), 8406-8414 (1995)
   PUBMED   7599131
REFERENCE   3  (residues 1 to 157)
  AUTHORS   Messerschmidt,A., Ladenstein,R., Huber,R., Bolognesi,M.,
            Avigliano,L., Petruzzelli,R., Rossi,A. and Finazzi-Agro,A.
  TITLE     Refined crystal structure of ascorbate oxidase at 1.9 A resolution
  JOURNAL   J Mol Biol 224 (1), 179-205 (1992)
   PUBMED   1548698
REFERENCE   4  (residues 1 to 157)
  AUTHORS   Messerschmidt,A. and Huber,R.
  TITLE     The blue oxidases, ascorbate oxidase, laccase and ceruloplasmin.
            Modelling and structural relationships
  JOURNAL   Eur J Biochem 187 (2), 341-352 (1990)
   PUBMED   2404764
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019352.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07732.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Lysinibacillus sphaericus"
                     /db_xref="taxon:1421"
     Protein         1..>157
                     /product="multicopper oxidase domain-containing protein"
                     /GO_function="GO:0005507 - copper ion binding [Evidence
                     IEA]"
     Region          38..157
                     /region_name="Cupredoxin"
                     /note="Cupredoxin superfamily; cl19115"
                     /db_xref="CDD:473140"
ORIGIN      
        1 mnkkinpadp atipkfvdal pkpvtakpkf ssrhpkkdyy elqmleaehs fhknfpksti
       61 wgynglypgp tieaskdkti yvkyknqlpt khflpvdytl hvandsqevr tvthlhganv
      121 dwesdghpea wytrdyaytg pkfnkeihey tkhqpgt
//
LOCUS       WP_258041062             101 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Lysinibacillus sphaericus].
ACCESSION   WP_258041062
VERSION     WP_258041062.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus sphaericus
  ORGANISM  Lysinibacillus sphaericus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Lysinibacillus sphaericus"
                     /db_xref="taxon:1421"
     Protein         <1..101
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <1..86
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 lifllvitsi vgiaigallp aldtiitdni rkelrgtvss fyssarfigv aagppimslv
       61 mknylnasyi tagvlgfmll fvvlkfikve diektnkmtq i
//
LOCUS       WP_258041072             178 aa            linear   BCT 02-MAR-2025
DEFINITION  TrkA C-terminal domain-containing protein, partial [Lysinibacillus
            sphaericus].
ACCESSION   WP_258041072
VERSION     WP_258041072.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus sphaericus
  ORGANISM  Lysinibacillus sphaericus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 178)
  AUTHORS   Anantharaman,V., Koonin,E.V. and Aravind,L.
  TITLE     Regulatory potential, phyletic distribution and evolution of
            ancient, intracellular small-molecule-binding domains
  JOURNAL   J Mol Biol 307 (5), 1271-1292 (2001)
   PUBMED   11292341
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014171.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02080.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Lysinibacillus sphaericus"
                     /db_xref="taxon:1421"
     Protein         <1..178
                     /product="TrkA C-terminal domain-containing protein"
                     /GO_function="GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0006813 - potassium ion transport
                     [Evidence IEA]"
     Region          <1..44
                     /region_name="HTH_ARSR"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; cl46857"
                     /db_xref="CDD:481197"
     Site            order(4,6..7,15..19,21..22,25,35..36,38..41)
                     /site_type="DNA binding"
                     /note="DNA-binding site [nucleotide binding]"
                     /db_xref="CDD:153418"
     Region          <64..100
                     /region_name="geminin-like_CC"
                     /note="coiled-coil domain found in the geminin family;
                     cl45898"
                     /db_xref="CDD:459243"
     Region          <103..175
                     /region_name="KhtT"
                     /note="K+/H+ antiporter KhtSTU, c-di-AMP-binding
                     regulatory subunit KhtT, contains RCK_C (TrkA_C) domain
                     [Inorganic ion transport and metabolism, Signal
                     transduction mechanisms]; COG0490"
                     /db_xref="CDD:440256"
ORIGIN      
        1 dkiyarssla sqynvsaeta rraiavlqdl eiveaskgsg viiksyemaa rfvrqfqdvq
       61 svhelqnell isiqkqqqel lhlqektkql isrtehfrsv npfipyqiem tadspcihht
      121 lqelnfwqnt sstivgirrg nelllspgpy asieegdiiy figndeslgr vqsflypn
//
LOCUS       WP_258041085             232 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Lysinibacillus sphaericus].
ACCESSION   WP_258041085
VERSION     WP_258041085.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus sphaericus
  ORGANISM  Lysinibacillus sphaericus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 232)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 232)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 232)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 232)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Lysinibacillus sphaericus"
                     /db_xref="taxon:1421"
     Protein         <1..232
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <1..167
                     /region_name="CcmA"
                     /note="ABC-type multidrug transport system, ATPase
                     component [Defense mechanisms]; COG1131"
                     /db_xref="CDD:440746"
ORIGIN      
        1 llkkeygeil lfgkdiveye laikndigvv fdelhvpetl namqldkfmk kvfktwdsny
       61 yferltqfkv pkrkkvkels rgmrmklsia lalshhpkll ildeptsgld piirdeildl
      121 fltfmqdeth silfsshits dlekiadyit fihngeilfs eskdvllydy gifkgtneev
      181 selpeqaiiq kregtfglev lvlkneisea ftverptied imlffvkgsv qs
//
LOCUS       WP_258041089             223 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar biosynthetic protein FliO [Lysinibacillus sphaericus].
ACCESSION   WP_258041089
VERSION     WP_258041089.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus sphaericus
  ORGANISM  Lysinibacillus sphaericus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 223)
  AUTHORS   Fabiani,F.D., Renault,T.T., Peters,B., Dietsche,T., Galvez,E.J.C.,
            Guse,A., Freier,K., Charpentier,E., Strowig,T., Franz-Wachtel,M.,
            Macek,B., Wagner,S., Hensel,M. and Erhardt,M.
  TITLE     A flagellum-specific chaperone facilitates assembly of the core
            type III export apparatus of the bacterial flagellum
  JOURNAL   PLoS Biol 15 (8), e2002267 (2017)
   PUBMED   28771474
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 223)
  AUTHORS   Minamino,T. and Macnab,R.M.
  TITLE     Components of the Salmonella flagellar export apparatus and
            classification of export substrates
  JOURNAL   J Bacteriol 181 (5), 1388-1394 (1999)
   PUBMED   10049367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016250.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04347.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Lysinibacillus sphaericus"
                     /db_xref="taxon:1421"
     Protein         1..223
                     /product="flagellar biosynthetic protein FliO"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0044781 - bacterial-type flagellum
                     organization [Evidence IEA]"
                     /calculated_mol_wt=25313
     Region          6..218
                     /region_name="FliO"
                     /note="Flagellar biosynthesis protein, FliO; cl01247"
                     /db_xref="CDD:445331"
ORIGIN      
        1 mlksfrvtmi faflvtflfv ypptvsvhad tntnsieycm kkpeeckdns dpaakedtvv
       61 saagdvsawe yikmvlalif vvalfyglmk flnkrnltfq rnqmvqnlgg lslgaqksvq
      121 llqigktiyl vgvgedvqli reitdpqeve ellalynekq efaatspyia eviskfkrkn
      181 kqnsstntqq dsfgelfgkk iseikqerse elerwkqken ddk
//
LOCUS       WP_258041138              49 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Lysinibacillus sphaericus].
ACCESSION   WP_258041138
VERSION     WP_258041138.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus sphaericus
  ORGANISM  Lysinibacillus sphaericus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 49)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 49)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 49)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 49)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..49
                     /organism="Lysinibacillus sphaericus"
                     /db_xref="taxon:1421"
     Protein         1..>49
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          4..>49
                     /region_name="CcmA"
                     /note="ABC-type multidrug transport system, ATPase
                     component [Defense mechanisms]; COG1131"
                     /db_xref="CDD:440746"
ORIGIN      
        1 mnaieihdlh kgfegfslkd isfsvpqgtv mgfvgengag ksttikcml
//
LOCUS       WP_258040940             434 aa            linear   BCT 02-MAR-2025
DEFINITION  L-lactate permease, partial [Lysinibacillus sphaericus].
ACCESSION   WP_258040940
VERSION     WP_258040940.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus sphaericus
  ORGANISM  Lysinibacillus sphaericus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 434)
  AUTHORS   Dong,J.M., Taylor,J.S., Latour,D.J., Iuchi,S. and Lin,E.C.
  TITLE     Three overlapping lct genes involved in L-lactate utilization by
            Escherichia coli
  JOURNAL   J Bacteriol 175 (20), 6671-6678 (1993)
   PUBMED   8407843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014683.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02652.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Lysinibacillus sphaericus"
                     /db_xref="taxon:1421"
     Protein         1..>434
                     /product="L-lactate permease"
                     /GO_component="GO:0005886 - plasma membrane [Evidence
                     IEA]"
                     /GO_function="GO:0015129 - lactate transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0015727 - lactate transport [Evidence
                     IEA]"
     Region          2..433
                     /region_name="LldP"
                     /note="L-lactate permease [Energy production and
                     conversion]; COG1620"
                     /db_xref="CDD:441227"
ORIGIN      
        1 mlkvvlalfp lvsilfmifi lkkssiftgi facllttvia tspvfhlnia llpkpfinsf
       61 litlpvtyvl ffgillyhlm eksgsiqkia ssiatstdnr idqvlllalg lspliesvsg
      121 fglaviviap ilmalgfnsl qssfialisl ciipwgtlam gtiigaslgn ipledlgvgs
      181 ammcipiyiy faflvtyigv gkeamqkkkw rilsmglvlg lsvwicnrfi svelagvvgs
      241 ltvmaaifim islqnrnkqy ysniflknis pylllialli asrtinpikd fltslltvti
      301 asyqfqlsll yspgfflfiv clftctlfrl nkasifdsik ltinkcypvl lttflyivvs
      361 emmaeaemiq llsvtaantf gsyfvfitpl igatggfltg sntasntmfi rlqtetathi
      421 glsptilacf qnvs
//
LOCUS       WP_258041186             257 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit, partial [Klebsiella
            michiganensis].
ACCESSION   WP_258041186
VERSION     WP_258041186.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00528.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Klebsiella michiganensis"
                     /db_xref="taxon:1134687"
     Protein         1..>257
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          3..>145
                     /region_name="OpuBB"
                     /note="ABC-type proline/glycine betaine transport system,
                     permease component [Amino acid transport and metabolism];
                     COG1174"
                     /db_xref="CDD:440787"
     Region          <117..257
                     /region_name="Lyase_aromatic"
                     /note="Aromatic amino acid lyase; pfam00221"
                     /db_xref="CDD:459718"
ORIGIN      
        1 mqvvigvila ppvawgihhl psvkpaivnl fgilytirsl alfvllppll ytqildpinv
       61 vvalaigsfa llvctvcdgl nsvsadtrqs aaalgykpaq qffqndppla vpviryglcv
      121 avvfkvrivs vaaligtpql gslftlvlpa aisdshhrwd rgqhhsgaaa vyagglrhss
      181 tqqlatseri imlqdslsir cipqirgapt alavaiaqls tasqarcdri tnthlsglpa
      241 flispdsgys gmmippy
//
LOCUS       WP_258041205             153 aa            linear   BCT 02-MAR-2025
DEFINITION  Mov34/MPN/PAD-1 family protein [Pseudomonas syringae].
ACCESSION   WP_258041205
VERSION     WP_258041205.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Iyer,L.M., Zhang,D., Rogozin,I.B. and Aravind,L.
  TITLE     Evolution of the deaminase fold and multiple origins of eukaryotic
            editing and mutagenic nucleic acid deaminases from bacterial toxin
            systems
  JOURNAL   Nucleic Acids Res 39 (22), 9473-9497 (2011)
   PUBMED   21890906
REFERENCE   2  (residues 1 to 153)
  AUTHORS   Iyer,L.M., Burroughs,A.M. and Aravind,L.
  TITLE     The prokaryotic antecedents of the ubiquitin-signaling system and
            the early evolution of ubiquitin-like beta-grasp domains
  JOURNAL   Genome Biol 7 (7), R60 (2006)
   PUBMED   16859499
REFERENCE   3  (residues 1 to 153)
  AUTHORS   Burns,K.E., Baumgart,S., Dorrestein,P.C., Zhai,H., McLafferty,F.W.
            and Begley,T.P.
  TITLE     Reconstitution of a new cysteine biosynthetic pathway in
            Mycobacterium tuberculosis
  JOURNAL   J Am Chem Soc 127 (33), 11602-11603 (2005)
   PUBMED   16104727
REFERENCE   4  (residues 1 to 153)
  AUTHORS   Verma,R., Aravind,L., Oania,R., McDonald,W.H., Yates,J.R. 3rd,
            Koonin,E.V. and Deshaies,R.J.
  TITLE     Role of Rpn11 metalloprotease in deubiquitination and degradation
            by the 26S proteasome
  JOURNAL   Science 298 (5593), 611-615 (2002)
   PUBMED   12183636
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025819.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14464.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         1..153
                     /product="Mov34/MPN/PAD-1 family protein"
                     /calculated_mol_wt=17863
     Region          33..135
                     /region_name="MPN"
                     /note="Mpr1p, Pad1p N-terminal (MPN) domains; cl13996"
                     /db_xref="CDD:472685"
ORIGIN      
        1 mttwqrplde qfvylsqnvl eiferhvqsd egteaggill ghvrgkhlev leaseptrhd
       61 rrlryfferm ihghksladr cwqetnglvr yigewhthpq evpspshidl dewktlaksr
      121 adrrpllavv vgrqnlhvel mhadgtrkkf tqr
//
LOCUS       WP_258041253             172 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Pseudomonas
            syringae].
ACCESSION   WP_258041253
VERSION     WP_258041253.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         1..>172
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <2..172
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mslalspalt aglrqlgqrh gatlfmtlla gwssllsrfs gqddvvigtp vanrprsele
       61 sligffvntl alrirpqggl svaalleqvk avmlaahahq dlpfeqvvea lqpprslghs
      121 pifqvmlaln ntpgggelsl pelsleplqa phttaqfdls lalveadggl ig
//
LOCUS       WP_258041280             123 aa            linear   BCT 02-MAR-2025
DEFINITION  NucA/NucB deoxyribonuclease domain-containing protein [Pseudomonas
            syringae].
ACCESSION   WP_258041280
VERSION     WP_258041280.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 123)
  AUTHORS   Basle,A., Hewitt,L., Koh,A., Lamb,H.K., Thompson,P., Burgess,J.G.,
            Hall,M.J., Hawkins,A.R., Murray,H. and Lewis,R.J.
  TITLE     Crystal structure of NucB, a biofilm-degrading endonuclease
  JOURNAL   Nucleic Acids Res 46 (1), 473-484 (2018)
   PUBMED   29165717
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025406.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14040.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         1..123
                     /product="NucA/NucB deoxyribonuclease domain-containing
                     protein"
                     /calculated_mol_wt=13308
     Region          25..120
                     /region_name="DNase_NucA_NucB"
                     /note="Deoxyribonuclease NucA/NucB; pfam14040"
                     /db_xref="CDD:404851"
ORIGIN      
        1 mtglagctli kadavdhdcl lrlkrseype tfghiqdtin ggqpyvvtiq rdaaklnrkt
       61 slkdvktmks kdrdewpmam lkeggnganv rhidpsdnrg adssignvls glpngtkikv
      121 evf
//
LOCUS       WP_258041047             273 aa            linear   BCT 02-MAR-2025
DEFINITION  virulence factor, partial [Lysinibacillus sphaericus].
ACCESSION   WP_258041047
VERSION     WP_258041047.1
KEYWORDS    RefSeq.
SOURCE      Lysinibacillus sphaericus
  ORGANISM  Lysinibacillus sphaericus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Lysinibacillus.
REFERENCE   1  (residues 1 to 273)
  AUTHORS   Kaito,C., Kurokawa,K., Matsumoto,Y., Terao,Y., Kawabata,S.,
            Hamada,S. and Sekimizu,K.
  TITLE     Silkworm pathogenic bacteria infection model for identification of
            novel virulence genes
  JOURNAL   Mol Microbiol 56 (4), 934-944 (2005)
   PUBMED   15853881
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025142.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13769.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Lysinibacillus sphaericus"
                     /db_xref="taxon:1421"
     Protein         1..>273
                     /product="virulence factor"
     Region          6..85
                     /region_name="Nfu_N"
                     /note="Scaffold protein Nfu/NifU N terminal; smart00932"
                     /db_xref="CDD:214919"
     Region          108..190
                     /region_name="Virulence_fact"
                     /note="Virulence factor; pfam13769"
                     /db_xref="CDD:433462"
ORIGIN      
        1 mkiltieptp spnsmkiivd telpfgksfn ftkdnkdeat geaaailaie gvkgvyhvad
       61 ffavernaky gwesilssir qvlgedvaea sdiqianefy gevyvhvqfy kqvplqvkvf
      121 dnqreyrvsc gdrfvdafnn iiatdvdeny ifqrkwidyg vrygeleeia eavkqeidvt
      181 ysaqrladiv atandtektn qkpaklkitv eqfqqpewek rfqlldqmad pelddlplld
      241 lalqdeqmsi rrlatvylgm iedvavvpyl eka
//
LOCUS       WP_258041316              40 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleotide-binding domain-containing protein [Pseudomonas
            syringae].
ACCESSION   WP_258041316
VERSION     WP_258041316.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 40)
  AUTHORS   Duncan-Lowey,B., McNamara-Bordewick,N.K., Tal,N., Sorek,R. and
            Kranzusch,P.J.
  TITLE     Effector-mediated membrane disruption controls cell death in CBASS
            antiphage defense
  JOURNAL   Mol Cell 81 (24), 5039-5051 (2021)
   PUBMED   34784509
REFERENCE   2  (residues 1 to 40)
  AUTHORS   Tal,N., Morehouse,B.R., Millman,A., Stokar-Avihail,A., Avraham,C.,
            Fedorenko,T., Yirmiya,E., Herbst,E., Brandis,A., Mehlman,T.,
            Oppenheimer-Shaanan,Y., Keszei,A.F.A., Shao,S., Amitai,G.,
            Kranzusch,P.J. and Sorek,R.
  TITLE     Cyclic CMP and cyclic UMP mediate bacterial immunity against phages
  JOURNAL   Cell 184 (23), 5728-5739 (2021)
   PUBMED   34644530
REFERENCE   3  (residues 1 to 40)
  AUTHORS   Burroughs,A.M., Zhang,D., Schaffer,D.E., Iyer,L.M. and Aravind,L.
  TITLE     Comparative genomic analyses reveal a vast, novel network of
            nucleotide-centric systems in biological conflicts, immunity and
            signaling
  JOURNAL   Nucleic Acids Res 43 (22), 10633-10654 (2015)
   PUBMED   26590262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036719.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18134.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..40
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         1..40
                     /product="nucleotide-binding domain-containing protein"
                     /calculated_mol_wt=4285
     Region          <2..40
                     /region_name="AGS_C"
                     /note="Adenylyl/Guanylyl and SMODS C-terminal sensor
                     domain; pfam18134"
                     /db_xref="CDD:436297"
ORIGIN      
        1 mdsghhqite ystfqggryv gcyavkdnac aarsriivpi
//
LOCUS       WP_258041327             116 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Pseudomonas syringae].
ACCESSION   WP_258041327
VERSION     WP_258041327.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 116)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 116)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         1..>116
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          19..>116
                     /region_name="VI_Rhs_Vgr"
                     /note="type VI secretion system Vgr family protein;
                     TIGR03361"
                     /db_xref="CDD:274542"
ORIGIN      
        1 mldanathia lalegisvdf qvlgfvgrea lnqpfcfdie lvstrpdlkl eellhkrgcl
       61 tfgatgkgiv hglvyritqg dsgksltrys irlmpqlayl rhnhdqqifq qltvpk
//
LOCUS       WP_258041363             390 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5801 repeats-in-toxin domain-containing protein, partial
            [Aeromonas hydrophila].
ACCESSION   WP_258041363
VERSION     WP_258041363.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas hydrophila
  ORGANISM  Aeromonas hydrophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 390)
  AUTHORS   Cirillo,S.L.G., Lum,J. and Cirillo,J.D.
  TITLE     Identification of novel loci involved in entry by Legionella
            pneumophila
  JOURNAL   Microbiology (Reading) 146 (Pt 6), 1345-1359 (2000)
   PUBMED   10846213
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039867.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19116.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Aeromonas hydrophila"
                     /db_xref="taxon:644"
     Protein         <1..>390
                     /product="DUF5801 repeats-in-toxin domain-containing
                     protein"
     Region          14..178
                     /region_name="DUF5801"
                     /note="Domain of unknown function (DUF5801); pfam19116"
                     /db_xref="CDD:465976"
     Region          192..356
                     /region_name="DUF5801"
                     /note="Domain of unknown function (DUF5801); pfam19116"
                     /db_xref="CDD:465976"
ORIGIN      
        1 sasaavdlga ngvfrfeddg praglaveap slgatvdesl vslggvgsdg vasatlsatn
       61 vqaqfnpafg adgagsigys laltgsnvas glyavdpaaa ngqgaaivln qvgnvitgsa
      121 ggvdyftlti npstgevtla lldnvwhgdt tnaddsvalt lgqgvltlvq tvtdadgdsa
      181 saavdlgang vfrfeddgpr aglaveapsl gatvdeslvs lggvgsdgva satlsatnvq
      241 aqfnpafgad gagsigysla ltgsnvasgl yavdpaaang qgaaivlnqv gnvitgsagg
      301 vdyftltinp stgevtlall dnvwhgdttn addsvavtlg egvltlvqtv tdadgdsasa
      361 avdlgangvf rfeddgprag laveapslga
//
LOCUS       WP_258041365             340 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5801 repeats-in-toxin domain-containing protein, partial
            [Aeromonas hydrophila].
ACCESSION   WP_258041365
VERSION     WP_258041365.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas hydrophila
  ORGANISM  Aeromonas hydrophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 340)
  AUTHORS   Cirillo,S.L.G., Lum,J. and Cirillo,J.D.
  TITLE     Identification of novel loci involved in entry by Legionella
            pneumophila
  JOURNAL   Microbiology (Reading) 146 (Pt 6), 1345-1359 (2000)
   PUBMED   10846213
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039867.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19116.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Aeromonas hydrophila"
                     /db_xref="taxon:644"
     Protein         <1..>340
                     /product="DUF5801 repeats-in-toxin domain-containing
                     protein"
     Region          14..178
                     /region_name="DUF5801"
                     /note="Domain of unknown function (DUF5801); pfam19116"
                     /db_xref="CDD:465976"
     Region          192..340
                     /region_name="DUF5801"
                     /note="Domain of unknown function (DUF5801); pfam19116"
                     /db_xref="CDD:465976"
ORIGIN      
        1 sasaavdlga ngvfrfeddg praglaveap slgatvdesl vslggvgsdg vasatlsatn
       61 vqaqfnpafg adgagsigys laltgsnvas glyavdpaaa ngqgaaivln qvgnvitgsa
      121 ggvdyftlti npstgevtla lldnvwhgdt tnaddsvalt lgqgvltlvq tvtdadgdsa
      181 saavdlgang vfrfeddgpr aglaveapsl gasvdeslvs lggvgsdgva satlsaanvq
      241 aqfnpafgad gagsigysla ltgsnvasgl yavdpaaang qgaaivlnqv gnvitgsagg
      301 vdyftltinp stgevtlall dnvwhgdttn addsvaltlg
//
LOCUS       WP_258041478             243 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein, partial [Pseudomonas syringae].
ACCESSION   WP_258041478
VERSION     WP_258041478.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 243)
  AUTHORS   Wang,J., Hofnung,M. and Charbit,A.
  TITLE     The C-terminal portion of the tail fiber protein of bacteriophage
            lambda is responsible for binding to LamB, its receptor at the
            surface of Escherichia coli K-12
  JOURNAL   J Bacteriol 182 (2), 508-512 (2000)
   PUBMED   10629200
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024939.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13550.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         <1..>243
                     /product="phage tail protein"
     Region          <1..>243
                     /region_name="COG4733"
                     /note="Phage-related protein, tail protein J [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443767"
ORIGIN      
        1 yavlqdlsai fhgmstwdgs qitfnadmpg dpvytynpsq ilnngeiqys gtrardrhnl
       61 amvtwdnpdq sfatdkepvf ddvamaesgs vnelsvdayg ctslgqaqra gqyaliteqt
      121 qtrpatfrvg ldggipktgq iiavadpmla granggrisa vagrvitvdr didlstgakl
      181 rvnlpsgkte arvitslagr rvtvaasfse vpeaecgwil eyddlktmqf lvrnitrpew
      241 hqy
//
LOCUS       WP_258041470             269 aa            linear   BCT 02-MAR-2025
DEFINITION  endonuclease [Pseudomonas syringae].
ACCESSION   WP_258041470
VERSION     WP_258041470.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 269)
  AUTHORS   Jekel,M. and Wackernagel,W.
  TITLE     The periplasmic endonuclease I of Escherichia coli has amino-acid
            sequence homology to the extracellular DNases of Vibrio cholerae
            and Aeromonas hydrophila
  JOURNAL   Gene 154 (1), 55-59 (1995)
   PUBMED   7867949
REFERENCE   2  (residues 1 to 269)
  AUTHORS   Nakamura,A., Koide,Y., Miyazaki,H., Kitamura,A., Masaki,H.,
            Beppu,T. and Uozumi,T.
  TITLE     Gene cloning and characterization of a novel extracellular
            ribonuclease of Bacillus subtilis
  JOURNAL   Eur J Biochem 209 (1), 121-127 (1992)
   PUBMED   1396690
REFERENCE   3  (residues 1 to 269)
  AUTHORS   Focareta,T. and Manning,P.A.
  TITLE     Extracellular proteins of Vibrio cholerae: molecular cloning,
            nucleotide sequence and characterization of the deoxyribonuclease
            (DNase) together with its periplasmic localization in Escherichia
            coli K-12
  JOURNAL   Gene 53 (1), 31-40 (1987)
   PUBMED   3036665
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016146.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04231.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         1..269
                     /product="endonuclease"
                     /GO_function="GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /calculated_mol_wt=29560
     Region          <2..183
                     /region_name="HNHc"
                     /note="HNH nucleases; HNH endonuclease signature which is
                     found in viral, prokaryotic, and eukaryotic proteins. The
                     alignment includes members of the large group of homing
                     endonucleases, yeast intron 1 protein, MutS, as well as
                     bacterial colicins, pyocins, and...; cl00083"
                     /db_xref="CDD:469607"
ORIGIN      
        1 mvgwvgksgg rvdasscglq arkqanradr vewehivpaw tfghqrqcwq eggrehcvkd
       61 dpvfqamead lfnlypsvge vngdrsnfny gmasgvapqy gqcktkvdfd qraaeprdev
      121 kglvarttfy mfdrynlnms rqqqqllmaw dkqfpvtswe lernkriaai mghsnpfvtg
      181 qrawitgykp lgdgvvntlp prittsssdv pqaagsastg tivgnknshi yhmpvgcpsy
      241 dnvsaknqva fgseseaaaa gyrkagnck
//
LOCUS       WP_258041602             149 aa            linear   BCT 02-MAR-2025
DEFINITION  cyclophilin-like fold protein [Citrobacter amalonaticus].
ACCESSION   WP_258041602
VERSION     WP_258041602.1
KEYWORDS    RefSeq.
SOURCE      Citrobacter amalonaticus
  ORGANISM  Citrobacter amalonaticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037716.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18050.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Citrobacter amalonaticus"
                     /db_xref="taxon:35703"
     Protein         1..149
                     /product="cyclophilin-like fold protein"
                     /calculated_mol_wt=16186
     Region          28..149
                     /region_name="COG4925"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:443953"
ORIGIN      
        1 mmkksglsll lmanfvfpvn anvaaaqtng enlmtikmti drqsytvela dnsaakalik
       61 qlpltltmee lngnekfadl mhplptsptt pgiihkgdvm lygretlvlf yatfhttyry
      121 tpigrvvaad llpeavghgg itvnfskmk
//
LOCUS       WP_258041620             416 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Citrobacter amalonaticus].
ACCESSION   WP_258041620
VERSION     WP_258041620.1
KEYWORDS    RefSeq.
SOURCE      Citrobacter amalonaticus
  ORGANISM  Citrobacter amalonaticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Citrobacter amalonaticus"
                     /db_xref="taxon:35703"
     Protein         1..416
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44743
     Region          1..406
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(10..11,14..15,18,57,115..116,118..120,123,143,
                     146..147,150,236,239..240,243..245,248,276,280,333..334,
                     338,342,358,361..362,365..366,369)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 magsvgtiie wydyalygaa aglvinklff pslspssall aalatfavgy farplggvii
       61 shigdkwgrk palifsivlm gfttvalgll psyfqigvws svllvllrll qgfgagaela
      121 galtfvgeyv pfkrrafyts iinastvvgi mlatgafllv sqlpedafls wgwripflas
      181 silfilafyi rhnldetpay qksmaeaekk kktqkvplte llknspkevf yaflsvtahq
      241 ansyilsvfs isymvntlgm trtdsliali cgsiagiigt pvmgsisdkv gaakvyslgc
      301 ifialfsipf faildtqnla fvilgmcily gigygatsgs qgaflvnlfp iryrfsgval
      361 srelngmlia gptpficawl vtlaegkpty vfgyiwaccl lsvvavhiik hkannq
//
LOCUS       WP_258041667             287 aa            linear   BCT 02-MAR-2025
DEFINITION  CheR family methyltransferase [Citrobacter amalonaticus].
ACCESSION   WP_258041667
VERSION     WP_258041667.1
KEYWORDS    RefSeq.
SOURCE      Citrobacter amalonaticus
  ORGANISM  Citrobacter amalonaticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter.
REFERENCE   1  (residues 1 to 287)
  AUTHORS   Djordjevic,S. and Stock,A.M.
  TITLE     Crystal structure of the chemotaxis receptor methyltransferase CheR
            suggests a conserved structural motif for binding
            S-adenosylmethionine
  JOURNAL   Structure 5 (4), 545-558 (1997)
   PUBMED   9115443
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013867.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01739.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Citrobacter amalonaticus"
                     /db_xref="taxon:35703"
     Protein         1..287
                     /product="CheR family methyltransferase"
                     /calculated_mol_wt=33103
     Region          21..286
                     /region_name="PRK10611"
                     /note="protein-glutamate O-methyltransferase CheR"
                     /db_xref="CDD:236725"
ORIGIN      
        1 mgnendvinm ntkkvniess isdrelekvs eliyqragiv ltnqkrdmvy nrlsrrlrer
       61 hltrfsdylq llennlhsde wqafvnaltt nltsffreay hfpllaehar krrgnynvwc
      121 tasstgeepc svaitldeal gstsagprvw atdidtevls tamagvyrln dldcmsieqk
      181 rnyflrgtgs qknlvkvrsd llntihyqhm nlldqnwdip apfdaifcrn vmiyfdqktq
      241 qqlmnrfsrl lkpggllfvg hsehfnning pfrlrgqsvy tlaqekr
//
LOCUS       WP_258041669             376 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar hook-length control protein FliK [Citrobacter
            amalonaticus].
ACCESSION   WP_258041669
VERSION     WP_258041669.1
KEYWORDS    RefSeq.
SOURCE      Citrobacter amalonaticus
  ORGANISM  Citrobacter amalonaticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter.
REFERENCE   1  (residues 1 to 376)
  AUTHORS   Shibata,S., Takahashi,N., Chevance,F.F., Karlinsey,J.E.,
            Hughes,K.T. and Aizawa,S.
  TITLE     FliK regulates flagellar hook length as an internal ruler
  JOURNAL   Mol Microbiol 64 (5), 1404-1415 (2007)
   PUBMED   17542929
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014207.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02120.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Citrobacter amalonaticus"
                     /db_xref="taxon:35703"
     Protein         1..376
                     /product="flagellar hook-length control protein FliK"
                     /calculated_mol_wt=38977
     Region          <115..318
                     /region_name="PRK10118"
                     /note="flagellar hook length control protein FliK"
                     /db_xref="CDD:236652"
ORIGIN      
        1 mnvittpgld ailtqgsqvl pdagqdetgn faaaleekin altpadtsty iqpdvaivll
       61 envdtalaqe etlaaqqaga pvlqlmiqvd kvvqalspdv ttaegeesln ttemtttlpq
      121 asnaqasnaq asnaqasngp taaaqaslpv snadkrdqqp vtaspaqsvk mseiatgtvt
      181 pasqspemst nmtaipdaps aplvgaslst qtpaqslpla qpvatpvpta vlnpelgtea
      241 wrqslnqqms iytrngiqna elrlnpqelg virinmqlns dqatlhfvse nhqvraalea
      301 ampqlrtsla esgiqlgess vgaesssswe dngqparfaa dhagdeengd viadlaepds
      361 vimqsamrpv gintfa
//
LOCUS       WP_258041349             156 aa            linear   BCT 02-MAR-2025
DEFINITION  RuvB-like domain-containing protein [Pseudomonas syringae].
ACCESSION   WP_258041349
VERSION     WP_258041349.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Rottbauer,W., Saurin,A.J., Lickert,H., Shen,X., Burns,C.G.,
            Wo,Z.G., Kemler,R., Kingston,R., Wu,C. and Fishman,M.
  TITLE     Reptin and pontin antagonistically regulate heart growth in
            zebrafish embryos
  JOURNAL   Cell 111 (5), 661-672 (2002)
   PUBMED   12464178
REFERENCE   2  (residues 1 to 156)
  AUTHORS   Makino,Y., Kanemaki,M., Koga,A., Osano,K., Matsu-Ura,T.,
            Kurokawa,Y., Kishimoto,T. and Tamura,T.
  TITLE     Chromosome mapping and expression of human tip49 family genes
  JOURNAL   DNA Seq 11 (1-2), 145-148 (2000)
   PUBMED   10902922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017844.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06068.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         1..156
                     /product="RuvB-like domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=17265
     Region          14..>136
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            116..123
                     /site_type="other"
                     /note="Walker A motif"
                     /db_xref="CDD:99707"
     Site            117..124
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:99707"
ORIGIN      
        1 mpratpppqq ttgicddhgq fpqtvnvifg rvfktgcpec mriakdedae rarineryel
       61 slkfgaalip krfatktltg yiadtagqke alrvcrkyvd kfpeisetgr cllmlgkpgt
      121 gkthlgtaia nelmrktdat avyrtlgtiq hgrehw
//
LOCUS       WP_258041700             392 aa            linear   BCT 02-MAR-2025
DEFINITION  Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing
            protein [Brevibacterium sediminis].
ACCESSION   WP_258041700
VERSION     WP_258041700.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium sediminis
  ORGANISM  Brevibacterium sediminis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
REFERENCE   1  (residues 1 to 392)
  AUTHORS   Baker,P.J., Turnbull,A.P., Sedelnikova,S.E., Stillman,T.J. and
            Rice,D.W.
  TITLE     A role for quaternary structure in the substrate specificity of
            leucine dehydrogenase
  JOURNAL   Structure 3 (7), 693-705 (1995)
   PUBMED   8591046
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014827.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02812.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Brevibacterium sediminis"
                     /db_xref="taxon:1857024"
     Protein         1..392
                     /product="Glu/Leu/Phe/Val dehydrogenase dimerization
                     domain-containing protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=41214
     Region          3..>77
                     /region_name="ELFV_dehydrog_N"
                     /note="Glu/Leu/Phe/Val dehydrogenase, dimerization domain;
                     pfam02812"
                     /db_xref="CDD:460706"
     Region          152..368
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(191..193,213..214,267..268,289)
                     /site_type="other"
                     /note="NAD(P) binding pocket [chemical binding]"
                     /db_xref="CDD:133449"
ORIGIN      
        1 mditwqdpdt galgyvvidt lvrgtasggl rmrkgctlee vrglaqgmtr keaihlregr
       61 hyvpvggakg gidfdprapg akdvlerflv dinpimhayw algedlgvrq ddideilarr
      121 elgsglsavn klvddpvdve araekafsai vdgvaqdelv gglgvatsvi aalhdagrdp
      181 restaviqgf gsmggatary laeaglrivg iadadgfvsn pagldveall vtrdqfggid
      241 realrpedhv gdrddwlaad advlvpaavs ysitpdtcdr vtasliveaa nmpvlpaaee
      301 tllargvtvv pdflansatn awwwwvtfgd vdgswddsra ivtstlhdlt tevltaardq
      361 gispraaaqa kvdanlaalg draaaavsvt es
//
LOCUS       WP_258041672             324 aa            linear   BCT 02-MAR-2025
DEFINITION  ParB family protein [Citrobacter amalonaticus].
ACCESSION   WP_258041672
VERSION     WP_258041672.1
KEYWORDS    RefSeq.
SOURCE      Citrobacter amalonaticus
  ORGANISM  Citrobacter amalonaticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter.
REFERENCE   1  (residues 1 to 324)
  AUTHORS   Schumacher,M.A. and Funnell,B.E.
  TITLE     Structures of ParB bound to DNA reveal mechanism of partition
            complex formation
  JOURNAL   Nature 438 (7067), 516-519 (2005)
   PUBMED   16306995
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020355.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08775.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Citrobacter amalonaticus"
                     /db_xref="taxon:35703"
     Protein         1..324
                     /product="ParB family protein"
                     /calculated_mol_wt=36308
     Region          46..208
                     /region_name="parB_part"
                     /note="ParB/RepB/Spo0J family partition protein;
                     TIGR00180"
                     /db_xref="CDD:272946"
     Region          194..318
                     /region_name="ParB"
                     /note="ParB family; pfam08775"
                     /db_xref="CDD:430210"
ORIGIN      
        1 mmsgrrktig rnftpqasve essaesmvqy ftlktgrkvk fsfvtvpssd vekktfvrqe
       61 tngrdqsalt rdslkdiirt irfqqffaci gvvdgeriei ldgsrrraaa meahtplnim
      121 vtsdkltaee arqlakdiqt akehnirevg lrllslkeag ltqkeiaeke glsqakvtra
      181 iqaatvpqel islfpvqyel sfsdyknlse lderlteksi vctqliekis sqldslvade
      241 hlqedekkaa ilkliakgaa sliaapakek atvsplwsfk ekdkyarkrv kgrsftyefn
      301 rlskelqgei daaiqnvlqr hlge
//
LOCUS       WP_258041828             216 aa            linear   BCT 02-MAR-2025
DEFINITION  homing endonuclease associated repeat-containing protein
            [Brevibacterium spongiae].
ACCESSION   WP_258041828
VERSION     WP_258041828.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium spongiae
  ORGANISM  Brevibacterium spongiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
REFERENCE   1  (residues 1 to 216)
  AUTHORS   Edgell,D.R.
  TITLE     Selfish DNA: homing endonucleases find a home
  JOURNAL   Curr Biol 19 (3), R115-R117 (2009)
   PUBMED   19211047
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037417.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18780.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Brevibacterium spongiae"
                     /db_xref="taxon:2909672"
     Protein         1..216
                     /product="homing endonuclease associated repeat-containing
                     protein"
                     /calculated_mol_wt=22233
     Region          <121..142
                     /region_name="HNH_repeat"
                     /note="Homing endonuclease associated repeat; pfam18780"
                     /db_xref="CDD:465866"
ORIGIN      
        1 msdtgrthts slavlgallf vtarsldstg apgipasadp aklspsdret laevesaltv
       61 qlensgtsvt stlaevaaav ayvrgraevp sltasgydkl rktvldglga tsaqgatiwp
      121 ptsqtavqrf gswnealkaa glatnkigra kgqlrfdsaa ydkaiaefla dcesrgtaat
      181 ykayteyaae hkgevpsaaa vrkfygswns alaave
//
LOCUS       WP_258041908             149 aa            linear   BCT 02-MAR-2025
DEFINITION  MazG nucleotide pyrophosphohydrolase domain-containing protein
            [Brevibacterium sediminis].
ACCESSION   WP_258041908
VERSION     WP_258041908.1
KEYWORDS    RefSeq.
SOURCE      Brevibacterium sediminis
  ORGANISM  Brevibacterium sediminis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
REFERENCE   1  (residues 1 to 149)
  AUTHORS   Zhang,J. and Inouye,M.
  TITLE     MazG, a nucleoside triphosphate pyrophosphohydrolase, interacts
            with Era, an essential GTPase in Escherichia coli
  JOURNAL   J Bacteriol 184 (19), 5323-5329 (2002)
   PUBMED   12218018
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015758.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03819.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Brevibacterium sediminis"
                     /db_xref="taxon:1857024"
     Protein         1..149
                     /product="MazG nucleotide pyrophosphohydrolase
                     domain-containing protein"
                     /calculated_mol_wt=16603
     Region          10..135
                     /region_name="NTP-PPase_MazG_Nterm"
                     /note="Nucleoside Triphosphate Pyrophosphohydrolase (EC
                     3.6.1.8) N-terminal tandem-domain of MazG proteins from
                     Escherichia coli and bacterial homologs; cd11528"
                     /db_xref="CDD:212135"
     Site            order(11..12,15,31..32,35,38..39,42..43,46,49,61,64..65,
                     68..73,75,78,91,94..98,100..102,104..105)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:212135"
ORIGIN      
        1 mgerdepglq avieamatlr rrcpwssrqd hqslekyare etdelivale dfateptaen
       61 raavvdelgd vfyqvlfhsa lldessgrdy ghslgaiidg leaklirrhp laftddpgde
      121 maslddvere yrrikaeeka aargedgsr
//
LOCUS       WP_258042006             294 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase [Pseudomonas syringae].
ACCESSION   WP_258042006
VERSION     WP_258042006.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 294)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 294)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         1..294
                     /product="phosphotransferase"
                     /calculated_mol_wt=32469
     Region          2..>289
                     /region_name="PRK06148"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:180426"
ORIGIN      
        1 mlkianpqea pvelslqiqv mqhigrrapq lpiprvypal dggyltpvvt esgesrqvrl
       61 lsflpgtpld kttlntqgre qigqllahlr latadfahpa esrkvcwdvq hlrvleplln
      121 gvveparrhs leralerfge vegliagcrq qvlhndfnts nividahrpq cvgaiidfgd
      181 tvktaiaidv stammnqlla vhpgqdldif apakdllrgy lqvadltpee laliphlama
      241 rlvaralitt wrsqlfpqns ayilrnaapg wgqldwmlnr spsqmsallm hfah
//
LOCUS       WP_258042028             186 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6990 domain-containing protein [Pseudomonas syringae].
ACCESSION   WP_258042028
VERSION     WP_258042028.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047190.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22499.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         1..186
                     /product="DUF6990 domain-containing protein"
                     /calculated_mol_wt=20387
ORIGIN      
        1 mmnendiasi lrergwvcnk devgdcfcvi digeaelqvi psvgkradhf rvslmpsiss
       61 kefsqavsfi sgdggshapi iishegpeki psisiddvir lsekailwar nqnieeglaa
      121 yrkmptyakg ampvrhlaal aiagdtgrle eykksfetgd rlgfvpyvts dminralmma
      181 kkqvtm
//
LOCUS       WP_258042029            3036 aa            linear   BCT 02-MAR-2025
DEFINITION  hemagglutinin repeat-containing protein [Pseudomonas syringae].
ACCESSION   WP_258042029
VERSION     WP_258042029.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024728.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13332.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3036
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         1..3036
                     /product="hemagglutinin repeat-containing protein"
                     /calculated_mol_wt=311886
     Region          1..51
                     /region_name="ESPR"
                     /note="Extended Signal Peptide of Type V secretion system;
                     pfam13018"
                     /db_xref="CDD:463773"
     Region          75..336
                     /region_name="TPS"
                     /note="TPS secretion domain; pfam05860"
                     /db_xref="CDD:461762"
     Region          80..1781
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          377..395
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          397..419
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          421..444
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          446..466
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          468..487
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          489..505
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          508..529
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          531..550
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          574..611
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          613..634
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          636..654
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          656..677
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          679..696
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          699..717
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          719..737
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          739..760
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          762..780
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          782..801
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          803..820
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          823..867
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          869..888
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          890..908
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          910..929
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          932..949
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          951..973
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          975..994
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1038..1056
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1058..1075
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1077..1096
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1097..1115
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1117..1136
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1138..1154
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1156..1173
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1181..1200
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1202..1232
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1639..1658
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1660..1677
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1679..1697
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1699..1721
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1723..1743
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1746..1769
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1771..1790
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1792..1810
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1806..1939
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          1812..1831
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1875..2015
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          2105..2279
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          2205..2362
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
ORIGIN      
        1 mnkhlyrivf nkargllmvv aenvasqvka pgtrasqvav apgcvatlga lrfalmtaig
       61 lvslsagpvw aagtivadps aaagqrptvi esangtpqvn iqtpsaagvs rntynqfdvd
      121 nrgvilnnsg vnsqtqlggw iegnaalang narvilnevn asnpsqlrgy vevagqraqv
      181 vianpagitc dgcgfinanr atlstgqaql engritgytv nrgainiqgk gldtrdadyt
      241 dliartvqvn agiwandlkv tagrnqvnad ntqatpqaga dgdkptvaid vaqlggmyag
      301 kimlvgtesg vgmrnagqig amagevvisa dgklqnqgai ssattarina tsvdnsgsly
      361 akgdlglvts gdidnsgtia sqnnttvtgk airstrgsal aagaatdgkl gssgnltvqa
      421 atvtaqgqnl aagdinlqad dlnlsgsqtq grnvtltann gdanlsgskv dasqtlmasa
      481 tktlrtdsat vnadnlqlna sdlsnvggel vqtgvadtsi kaagtldnrs griasnadna
      541 rlsashvdnr sgtiehagkg slniqanrld gnagkiasna slsikaadav vddgltqgqq
      601 itldstnlsn qrgrilqtga qplqinasqq fdnqngqvss pgalalnvgt lnnqsgkvia
      661 tdgglltvta gdlidnsggt laasgtaqln garlenskgt vsaggelqaq fsqlnniggt
      721 lastqrmaii agqfnntngv lgsvqsglsv nvsngalnnn ggrleaqgdi tvaakgldnr
      781 sgvisgqald lnsngnladn sdgtldarat ldlrsgelrn aagliqakgk lfidtgsqal
      841 nnlqsgttkg isgqdaveir saslnnsagf lsakgnllln asdvantdgg qiigektvhi
      901 egsqlnnrgg qlqslgdvel vlgqtlnnqg glvrsagals lstdvldnsa tqgtnqgleg
      961 rstnlavntl nnqggavrtd eglllgvsqt lnnqngliss tgdltisdrd taqrrqfann
     1021 ldgtlmagkl lsvnnldgtl iagkllslna ayysgtgral slgditfrlq sgldlsgqiq
     1081 annnvdlsta gafnntgrll agksllvsaq tldnsanaei sagqvrlnva dtltnrglid
     1141 gqqvrvqatt lnnlgtarly gdqlaiattt lnnldengta atlaaresln igagtvnnre
     1201 qslifsagdl aiggglsaad taqgraqllt nasatiealg nlslnvqsar ntnehfstre
     1261 vevsrtpeqe fqltgstnry qaneislrnd evnylvtpeg qrdnwnrydy trvvnetqia
     1321 tsapaqilsg gtmlisagdv lndksriiag gllqadvtsl tntelsgqrt tvdsgtvtnf
     1381 yriqrkgrdr qgsntaaytp apliqeislq ptvfaqnsav agtgtqisar gtqavgqqia
     1441 stgavnapaa rtfqvapivq vaaqttqnaq gvaeqirtgg pslelpnnsl fttnpqpsss
     1501 ylietdprfa syrtwlssdy mlerlqvdpa ltqqrlgdgf yeqklireqv aqltgrrfld
     1561 gyandeaqyr alidnavtla nqwqlvpgve lspeqmaqlt sdivwlvqkk vtlangetrd
     1621 vlvpqvyvrv qesdlngsgs liagqrlnln iagdlvnsgs lagrsvmait aqnienlggr
     1681 iqadkvslta renldnlggl igatdslain agqnvnviss srdsssaqgt rtnlsrvagl
     1741 fvsgaggtmd vnagkdlnlt gaqvvnagtg gstslqagnn inlmtvgeah qqsvnwngsn
     1801 wrkdasqtev gstiqgqgdv rlsaaqdina rgasvtsqqg aiiadagrdv nltaaqntqf
     1861 adeahkfkgs nglfsskttt trdtvnqtqa qgstlsgeqt yvqagrdinv sgsnvvstnq
     1921 tilaadnnin ieaatessse rhdksvkksg lfsgggialt lgtqqqsvkd lttsqtaaas
     1981 tvgstkgdvl ieagkgyrqv gsqvsapegs vditgqtidv vearnsskre retlfkqtgf
     2041 tltvtnpvis aiqttqqmkh asentddgrm kalaaatvll ggnnaatava mnpdmaggln
     2101 islslgtkkn eskttqtsds aagstitagq dvrlratgag adsditvqgs qikagrdasl
     2161 madgdinlla anntsqqntd skgssasvgi gfslggtkng ftldlgvtgn kgqadgdelt
     2221 htntkveagn qlllasggdt qikgavasgk kviadvggdl nieslqdtnt ykvdekslgf
     2281 gvslcippfc tgmstisgas gnfgatnids nyasvteqsg ikagddgfdi nvrgntdlvg
     2341 aviassdkav qdgknslvts sltsrdiknk adydantvsl gggyneigkd qkgnvqtggt
     2401 vnpgtdlakn enniganmpi aisasdkass vtrsgisgga vvitddaeqq krtgktaeqt
     2461 vaslnrdvss drngsnslkp ifdedevrag feivtafsne astflankar eadlkrqqsk
     2521 klqeqadkag glsdtermll qnsarqlaae andisenwga ggtyrqitta ligaaggnis
     2581 agnaafvqgl vvnyvqqrga gyigdlvang eltegsplha alhgivacag aaasnqscgs
     2641 gaagaaassl ltglfsqssp deseeqreak rnlivslvtg laatsasidp taantaagaa
     2701 vdnnwlatqq ivqakkeyde aegyaaklev agkwayisgk qdvlthlgig kglvqsgwnd
     2761 vaglaefamh pidglnglsq linnpearaq fgdsvvneln tkiatvktal evggdenaea
     2821 lgkaigeiaw qvgsiatgvg gaakggvala kagikvggaq lekmaeiarl ekiakaeslk
     2881 npvveaekaa ldriaqsdkg pdlsnkapns nlntlavkrl qtgelpgssi ggpgtpremp
     2941 atpnptatan dfvskvfnga qiakksipnc dgcwraqtsd gawvtyrpag qasgatsstt
     3001 atveinstti nnlnangsgr aqilklkfpv rsevnq
//
LOCUS       WP_258042060             174 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein,
            partial [Pseudomonas syringae].
ACCESSION   WP_258042060
VERSION     WP_258042060.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 174)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         <1..>174
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
     Region          <1..>174
                     /region_name="FtsI"
                     /note="Cell division protein FtsI, peptidoglycan
                     transpeptidase (Penicillin-binding protein 2) [Cell cycle
                     control, cell division, chromosome partitioning, Cell
                     wall/membrane/envelope biogenesis]; COG0768"
                     /db_xref="CDD:440531"
ORIGIN      
        1 iqyltfnelk aaierthaka asaivldaqt gevlalanyp tynpndrtrl sgeqlrnrvl
       61 tdtfepgsmm kpitislalq lkrvtrttlv qtngkynfeg atisdtsnyg tltvaqviqh
      121 ssnigttkia mtlkqqemwd mftsvglgqa pkigfpgava grlrpankwr rieq
//
LOCUS       WP_258042054             669 aa            linear   BCT 02-MAR-2025
DEFINITION  LPD7 domain-containing protein [Pseudomonas syringae].
ACCESSION   WP_258042054
VERSION     WP_258042054.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 669)
  AUTHORS   Iyer,L.M., Burroughs,A.M., Anand,S., de Souza,R.F. and Aravind,L.
  TITLE     Polyvalent Proteins, a Pervasive Theme in the Intergenomic
            Biological Conflicts of Bacteriophages and Conjugative Elements
  JOURNAL   J Bacteriol 199 (15), e00245-17 (2017)
   PUBMED   28559295
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 669)
  AUTHORS   Maindola,P., Raina,R., Goyal,P., Atmakuri,K., Ojha,A., Gupta,S.,
            Christie,P.J., Iyer,L.M., Aravind,L. and Arockiasamy,A.
  TITLE     Multiple enzymatic activities of ParB/Srx superfamily mediate
            sexual conflict among conjugative plasmids
  JOURNAL   Nat Commun 5, 5322 (2014)
   PUBMED   25358815
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037421.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18821.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         1..669
                     /product="LPD7 domain-containing protein"
                     /calculated_mol_wt=73239
     Region          188..267
                     /region_name="LPD7"
                     /note="Large polyvalent protein-associated domain 7;
                     pfam18821"
                     /db_xref="CDD:465879"
     Region          <208..>331
                     /region_name="PRK13878"
                     /note="conjugal transfer relaxase TraI; Provisional"
                     /db_xref="CDD:237539"
ORIGIN      
        1 mlfdplkrpa dkalvfkras ikaltvnkha stvaayftrq aqhnqiapah rrairridqq
       61 yfalrravfs dqrltrqdka qlvsvltfer lkareqfhnp kpnievnlmg saairnlldd
      121 ekedpgfsis gargpgpegv rervkrvmdr fakqvdpvaa serardlsak dlytrkakfs
      181 qnvhyldkqt dktlfvdtgt tismrrtgit eagvsvalql arerfgstlt ingtaefkkl
      241 vieavakngl dvhftdkamn qsladrrael dierhgqsig patdlprhvd datrdvrdqa
      301 drlgvtvpie alygqgktad qvsqalatql dtvpeperia fvetvaitlg ipergqpkgd
      361 qafaqwqaqr aqpaansaas atseaqanvp tpadavsepv speaakpala ndpdlqspse
      421 lvrleaqwrr dfpmseaevr asdtvmglrg edhavwiiat ndktpeaaal ltaymendsy
      481 reafkasiva aykqvenspk lvddldhlta maaqivneve erlfptpqaa tgqtapsrsk
      541 viegtliehg eapyqhnddn qmsyfvtlkp eggkprtvwg vgleeamsda dlkqgdqvrl
      601 qdlgtqpvvv qvieedgtvt dktvnrrews aqpvaperev aettpkgqaa aagtpelssp
      661 deddgmsvd
//
LOCUS       WP_258042096             227 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein, partial [Pseudomonas
            syringae].
ACCESSION   WP_258042096
VERSION     WP_258042096.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 227)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 227)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 227)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         <1..227
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
     Region          <1..215
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
ORIGIN      
        1 glsnpdgprh qqhsmilvpv dtpgvkivrp lpvfgyddap hghaevlfen vrvpygnvll
       61 gegrgfeiaq grlgpgrihh cmrsigmaer alelmcrrsi drvafgkpla rlggnidkia
      121 dsrmeidmar lltlkaaymm dtvgnkvaks eiaqikvvap nvalkvidra iqmhggagvp
      181 khfplvqmya mqrtlrladg pdevhraang kfelgkyvha dgvrsrs
//
LOCUS       WP_258042103             151 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase, partial [Pseudomonas syringae].
ACCESSION   WP_258042103
VERSION     WP_258042103.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae
  ORGANISM  Pseudomonas syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 151)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 151)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Pseudomonas syringae"
                     /db_xref="taxon:317"
     Protein         <1..151
                     /product="phosphotransferase"
     Region          3..>146
                     /region_name="PRK06148"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:180426"
ORIGIN      
        1 dcssgqsyvl kianpqespi elslqievmq higrrapqlp iprvypaldg gylttvvtas
       61 desrqvrlls flpgtpldnt tlnaqgreqi gqllahlrla tadfvhpaes rkvcwdvqhl
      121 rvleplldgv veparrhsle ralerfgeve g
//
LOCUS       WP_258042307             279 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Candidatus Methylacidiphilum fumarolicum].
ACCESSION   WP_258042307
VERSION     WP_258042307.1
KEYWORDS    RefSeq.
SOURCE      Candidatus Methylacidiphilum fumarolicum
  ORGANISM  Candidatus Methylacidiphilum fumarolicum
            Bacteria; Pseudomonadati; Verrucomicrobiota; Methylacidiphilae;
            Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum (ex
            Ratnadevi et al. 2023).
REFERENCE   1  (residues 1 to 279)
  AUTHORS   Zhang,Y.L., Arakawa,E. and Leung,K.Y.
  TITLE     Novel Aeromonas hydrophila PPD134/91 genes involved in O-antigen
            and capsule biosynthesis
  JOURNAL   Infect Immun 70 (5), 2326-2335 (2002)
   PUBMED   11953367
  REMARK    Erratum:[Infect Immun 2002 Jun;70(6):3308]
REFERENCE   2  (residues 1 to 279)
  AUTHORS   Swartley,J.S., Liu,L.J., Miller,Y.K., Martin,L.E., Edupuganti,S.
            and Stephens,D.S.
  TITLE     Characterization of the gene cassette required for biosynthesis of
            the (alpha1-->6)-linked N-acetyl-D-mannosamine-1-phosphate capsule
            of serogroup A Neisseria meningitidis
  JOURNAL   J Bacteriol 180 (6), 1533-1539 (1998)
   PUBMED   9515923
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025025.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13641.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Candidatus Methylacidiphilum fumarolicum"
                     /db_xref="taxon:591154"
     Protein         1..279
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=31911
     Region          9..219
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
ORIGIN      
        1 mpskcqltyl rpcvesimsk tsydryelll vvnekrlrna evrqylegls ggegkvrlvv
       61 ypdepfnyak innaavrear gevlallndd levitgdwle emvghamrae vgavgamlyy
      121 pdgtiqhagv ilaergipdh rlrnvrkeea aeggylwyeq nlsavtaacv vmrkacfmev
      181 ggfdesyaid lndidlclrl rqrgylivwt pfaefyhyes vskmadiaeq yalwseensk
      241 fikkwlpvfp ldpyynpnls fkppyyklsf pprvkplir
//
LOCUS       WP_258042213              92 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: TraX family protein, partial [Klebsiella pneumoniae
            complex].
ACCESSION   WP_258042213
VERSION     WP_258042213.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae complex
  ORGANISM  Klebsiella pneumoniae complex
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (residues 1 to 92)
  AUTHORS   Maneewannakul,K., Maneewannakul,S. and Ippen-Ihler,K.
  TITLE     Characterization of traX, the F plasmid locus required for
            acetylation of F-pilin subunits
  JOURNAL   J Bacteriol 177 (11), 2957-2964 (1995)
   PUBMED   7768788
REFERENCE   2  (residues 1 to 92)
  AUTHORS   Moore,D., Hamilton,C.M., Maneewannakul,K., Mintz,Y., Frost,L.S. and
            Ippen-Ihler,K.
  TITLE     The Escherichia coli K-12 F plasmid gene traX is required for
            acetylation of F pilin
  JOURNAL   J Bacteriol 175 (5), 1375-1383 (1993)
   PUBMED   8444800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017655.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05857.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Klebsiella pneumoniae complex"
                     /db_xref="taxon:3390273"
     Protein         1..>92
                     /product="TraX family protein"
     Region          11..>92
                     /region_name="TraX"
                     /note="TraX protein; cl05434"
                     /db_xref="CDD:414418"
ORIGIN      
        1 mraqytfpga tdswlqrllt wtpgqtdmik tvalvlmvtd htglllagnn evmrllgrgc
       61 fplfglawgm nlarhaeirq sqlnslwgwa lv
//
LOCUS       WP_258042308             170 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Escherichia coli].
ACCESSION   WP_258042308
VERSION     WP_258042308.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 170)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 170)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 170)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 170)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..170
                     /product="ATP-binding protein"
     Region          <1..159
                     /region_name="envZ"
                     /note="osmolarity sensor protein; Provisional; PRK09467"
                     /db_xref="CDD:236531"
ORIGIN      
        1 ieqfidylrt wqempmemad lnavlgevia aesgyereie talypgsiev kmhplsikra
       61 vanmvvnaar ygngwikvss gtepnrawfq veddgpgiap eqrkhlfqpf vrgdsartis
      121 gtglglaivq rivdnhngml elgtserggl sirawlpvpv traqgttkeg
//
LOCUS       WP_258042325             193 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Pseudomonas
            avellanae].
ACCESSION   WP_258042325
VERSION     WP_258042325.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas avellanae
  ORGANISM  Pseudomonas avellanae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 193)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Pseudomonas avellanae"
                     /db_xref="taxon:46257"
     Protein         <1..>193
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..>193
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 ltaiqqaywf greasvslgg vsahgyealr lpgldvprfe qalnrmilrh dmlrvvflgd
       61 gtqqvldsvp tyhmprndlr glsaddaqqa lqvtrarqsh qvldvsrwpl fefslsllde
      121 dishlhisld alivdaastq ilarelmafy adpqrvlpep gltfrdyvla ehalrsercy
      181 gqaldywrer vat
//
LOCUS       WP_258042327             176 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Pseudomonas avellanae].
ACCESSION   WP_258042327
VERSION     WP_258042327.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas avellanae
  ORGANISM  Pseudomonas avellanae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 176)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Pseudomonas avellanae"
                     /db_xref="taxon:46257"
     Protein         <1..>176
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          1..176
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(10..11,13..14,17,21,23..29,117..122,128..129,
                     131..132)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176102"
ORIGIN      
        1 sddaefgllp pllsrlreea pgiivvirra nylllpalla sgeisvgvsy tvdlpanakr
       61 kklrdigckv irgdarpepl tldeycerqh amvsfsgdls gnidldlarv grarkvvlav
      121 pqfnglrall agteliatvp dyaacalieg cqlraeeppf pivpaelsmv wsgvhd
//
LOCUS       WP_258042330             170 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Pseudomonas
            avellanae].
ACCESSION   WP_258042330
VERSION     WP_258042330.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas avellanae
  ORGANISM  Pseudomonas avellanae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 170)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Pseudomonas avellanae"
                     /db_xref="taxon:46257"
     Protein         <1..>170
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..>170
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 plqegilyhh ltaeqgdpyv lqavfgladk grldafsnal qsvierhdil rtslywegld
       61 epvqvvwrra qlgleqfesd dssvdvmtql qerfdarqhr mdirqaplmr iayaqepatq
      121 rwvalllfhh lvmdhtalev vsqemecyll geiqklnepv pyrnyvaqar
//
LOCUS       WP_258042351             745 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein
            [Paenibacillus sp. UNC499MF].
ACCESSION   WP_258042351
VERSION     WP_258042351.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. UNC499MF
  ORGANISM  Paenibacillus sp. UNC499MF
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 745)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Paenibacillus sp. UNC499MF"
                     /db_xref="taxon:1502751"
     Protein         1..745
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /calculated_mol_wt=80762
     Region          3..597
                     /region_name="FtsI"
                     /note="Cell division protein FtsI, peptidoglycan
                     transpeptidase (Penicillin-binding protein 2) [Cell cycle
                     control, cell division, chromosome partitioning, Cell
                     wall/membrane/envelope biogenesis]; COG0768"
                     /db_xref="CDD:440531"
     Region          617..665
                     /region_name="PASTA"
                     /note="PASTA domain. This domain is found at the C-termini
                     of several Penicillin-binding proteins (PBPs) and
                     bacterial serine/threonine kinases. It is a small globular
                     fold consisting of 3 beta-sheets and an alpha-helix. The
                     name PASTA is derived from PBP and...; cl02768"
                     /db_xref="CDD:470670"
     Region          675..>708
                     /region_name="PASTA"
                     /note="PASTA domain. This domain is found at the C-termini
                     of several Penicillin-binding proteins (PBPs) and
                     bacterial serine/threonine kinases. It is a small globular
                     fold consisting of 3 beta-sheets and an alpha-helix. The
                     name PASTA is derived from PBP and...; cl02768"
                     /db_xref="CDD:470670"
ORIGIN      
        1 msaskllnea ekrwetdrvv paergkildr egrilaeevp aysvslnpkv iyltgladdi
       61 taglteilkd nsdspdlsdk ikglatkkra vdpaaaqsst tnaagddkkd nkkdakkepk
      121 pedaylvnve vnnegknidk akadqvqqlv ktlqqklndk dkkkygtqad vgiylttgkk
      181 ryypgnslaa hilgytnreg kasmgieaql ddqlkgtpgs lsynsdkngv elvqsksvyv
      241 ppvngnhvkl tidkniqyym enalskvmdq whpkglmaia adpktmeilg masypnynpn
      301 efwkggdqtn hnvqsqyepg stfklvtlaa tveegifdpe akfksgsvqv pgrkpvydhn
      361 rigwgpikyi eglkrssnva fvnlgykmlg verlkdyidr fgfgkktnid lygevagqtn
      421 layevdyaaa tygqaltata iqeaaaygai anggklmwph vvkeiidpkt qqpiqkiepk
      481 vvgqpvsaat akkvgeyleq vvadqvvgtg kdayiegyri agktgtankv ipgqkgyaan
      541 kwvisfagfa pvedpqfvli iiadepelgn nyllghyvaa pafkeimqns lrylripssk
      601 qqaqvtpvqt stqkaldfgn mtaaqakaaa eragvdietv gqgakvvaqy pkagteigpy
      661 qrvylamqap aeiavpdmkg kalrdalelc allgirtast gegyvvsqal qgegtervlt
      721 lqlqplggev ltppeekqav pekse
//
LOCUS       WP_258042371             759 aa            linear   BCT 02-MAR-2025
DEFINITION  heparinase II/III domain-containing protein [Paenibacillus sp.
            UNC499MF].
ACCESSION   WP_258042371
VERSION     WP_258042371.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. UNC499MF
  ORGANISM  Paenibacillus sp. UNC499MF
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 759)
  AUTHORS   Meier,E.L., Razavi,S., Inoue,T. and Goley,E.D.
  TITLE     A novel membrane anchor for FtsZ is linked to cell wall hydrolysis
            in Caulobacter crescentus
  JOURNAL   Mol Microbiol 101 (2), 265-280 (2016)
   PUBMED   27028265
REFERENCE   2  (residues 1 to 759)
  AUTHORS   Dong,W., Lu,W., McKeehan,W.L., Luo,Y. and Ye,S.
  TITLE     Structural basis of heparan sulfate-specific degradation by
            heparinase III
  JOURNAL   Protein Cell 3 (12), 950-961 (2012)
   PUBMED   23011846
REFERENCE   3  (residues 1 to 759)
  AUTHORS   Shaya,D., Tocilj,A., Li,Y., Myette,J., Venkataraman,G.,
            Sasisekharan,R. and Cygler,M.
  TITLE     Crystal structure of heparinase II from Pedobacter heparinus and
            its complex with a disaccharide product
  JOURNAL   J Biol Chem 281 (22), 15525-15535 (2006)
   PUBMED   16565082
REFERENCE   4  (residues 1 to 759)
  AUTHORS   Pojasek,K., Shriver,Z., Hu,Y. and Sasisekharan,R.
  TITLE     Histidine 295 and histidine 510 are crucial for the enzymatic
            degradation of heparan sulfate by heparinase III
  JOURNAL   Biochemistry 39 (14), 4012-4019 (2000)
   PUBMED   10747789
REFERENCE   5  (residues 1 to 759)
  AUTHORS   Su,H., Blain,F., Musil,R.A., Zimmermann,J.J., Gu,K. and
            Bennett,D.C.
  TITLE     Isolation and expression in Escherichia coli of hepB and hepC,
            genes coding for the glycosaminoglycan-degrading enzymes heparinase
            II and heparinase III, respectively, from Flavobacterium heparinum
  JOURNAL   Appl Environ Microbiol 62 (8), 2723-2734 (1996)
   PUBMED   8702264
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019552.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07940.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Paenibacillus sp. UNC499MF"
                     /db_xref="taxon:1502751"
     Protein         1..759
                     /product="heparinase II/III domain-containing protein"
                     /GO_function="GO:0016829 - lyase activity [Evidence IEA]"
                     /calculated_mol_wt=81970
     Region          <195..349
                     /region_name="AlgLyase"
                     /note="Alginate Lyase A1-III; enzymatically depolymerizes
                     alginate, a complex copolymer of beta-D-mannuronate and
                     alpha-L-guluronate, by cleaving the beta-(1,4) glycosidic
                     bond; cl00179"
                     /db_xref="CDD:444729"
     Region          431..>517
                     /region_name="Hepar_II_III"
                     /note="Heparinase II/III-like protein; pfam07940"
                     /db_xref="CDD:429747"
ORIGIN      
        1 mpsgcdkegp llrvapgevs aqkeqsgtgr papvseplap aqgslrgkav rfpwaretak
       61 avrdelnrln aagslaipqe pggwwhqyvc pvhhtellfd paeaeassfr cpygcelege
      121 eyrgawlvfk hqslaraale aaavyaalrd escarigkel lvayaeqfpl ypvhagaqgw
      181 mlkgrafhqa lteaiwsttl lgaylllrde gvtfsekete algifmglle qsmteyrhil
      241 irerqnaenn ytawlnasls cvyaaqgrkd alesliegeg gfrdhlsigv nadglefegs
      301 tyyhvfvlra ylisarmaem fgidlyacqg rngqsmrgmf eamadladdr gvlpalhdgp
      361 mergpyarei aeiaeqglar ygigglrpil reayrqlggt lasprarcgl eallygedaq
      421 pdaagdgads trgprlwadt gfavgrragn plsfladfga hggahghfdk lhltvmhpag
      481 tltpdfgvvp ygsalrqawy setrshntvt ldglsqapht gqcmrfeete ealyawfqst
      541 ggypgctldr hllltdgwll dwfrvtahdg gprtaewwvh paaepllvpe eageapgmeq
      601 pvlagtfgdg degnplllae nlkeglagvp gvglqlngrp dlqapapapa amrlryglsg
      661 gesvyhtalv mpgdellavr tpgdsldpsr lltaivhrht gatadfvhvy ragqaadiqw
      721 laegvvevta eegatgetfa rkvrlagqag lelvepdre
//
LOCUS       WP_258042404             528 aa            linear   BCT 02-MAR-2025
DEFINITION  M2 family metallopeptidase [Paenibacillus sp. UNC499MF].
ACCESSION   WP_258042404
VERSION     WP_258042404.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. UNC499MF
  ORGANISM  Paenibacillus sp. UNC499MF
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 528)
  AUTHORS   Isaac,R.E., Schoofs,L., Williams,T.A., Corvol,P., Veelaert,D.,
            Sajid,M. and Coates,D.
  TITLE     Toward a role for angiotensin-converting enzyme in insects
  JOURNAL   Ann N Y Acad Sci 839, 288-292 (1998)
   PUBMED   9629165
REFERENCE   2  (residues 1 to 528)
  AUTHORS   Corvol,P., Williams,T.A. and Soubrier,F.
  TITLE     Peptidyl dipeptidase A: angiotensin I-converting enzyme
  JOURNAL   Methods Enzymol 248, 283-305 (1995)
   PUBMED   7674927
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013560.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01401.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Paenibacillus sp. UNC499MF"
                     /db_xref="taxon:1502751"
     Protein         1..528
                     /product="M2 family metallopeptidase"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0008237 - metallopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0008241 - peptidyl-dipeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=59646
     Region          <159..528
                     /region_name="GluZincin"
                     /note="Gluzincin Peptidase family (thermolysin-like
                     proteinases, TLPs) which includes peptidases M1, M2, M3,
                     M4, M13, M32 and M36 (fungalysins); cl14813"
                     /db_xref="CDD:472708"
ORIGIN      
        1 msqerfqtga gsflreanre laglyvpmmn slwkvittge fryvkqceqd ekayqealas
       61 pvlggqaeyw lnrrglsaeq krqlqvlkae laeyrmeane rqaaaslwnd lhytigtfra
      121 eaggallseh aahvlmrrvs dgrqrkqiwq agmrlgglta pkllelvklr nraarrlgyd
      181 dyfamklena gvgldtltel irqirgglds ayrevkggid leladrfhia rsevrswhyt
      241 hpffqthfam eeplgagtde madkvsgwlr ergcdlsavi rgadlaerpg ksqancclnl
      301 drsrdirmsc nlspdtkgla vllhesghal fekeldpslp fllrqpahpf lsegaallme
      361 rlawdeewkr elfggepgpg aggdagsaqe klrketlvrl ywtltlvefe kqlyanpdqp
      421 lnglwwdlve dvqgitrpse wdypywaaka hlstlpvyyy nyllgeaaas qfqhtlqarf
      481 kvwhgkealg hlrkevfrpg asaswrella agtsqdlnpl flirqlrg
//
LOCUS       WP_258042422             268 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX hydrolase N-terminal domain-containing protein [Paenibacillus
            sp. UNC499MF].
ACCESSION   WP_258042422
VERSION     WP_258042422.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. UNC499MF
  ORGANISM  Paenibacillus sp. UNC499MF
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 268)
  AUTHORS   Bessman,M.J., Frick,D.N. and O'Handley,S.F.
  TITLE     The MutT proteins or 'Nudix' hydrolases, a family of versatile,
            widely distributed, 'housecleaning' enzymes
  JOURNAL   J Biol Chem 271 (41), 25059-25062 (1996)
   PUBMED   8810257
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023949.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12535.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Paenibacillus sp. UNC499MF"
                     /db_xref="taxon:1502751"
     Protein         1..268
                     /product="NUDIX hydrolase N-terminal domain-containing
                     protein"
                     /calculated_mol_wt=30428
     Region          8..57
                     /region_name="Nudix_N"
                     /note="Hydrolase of X-linked nucleoside diphosphate N
                     terminal; pfam12535"
                     /db_xref="CDD:432618"
     Region          66..255
                     /region_name="CE4_SF"
                     /note="Catalytic NodB homology domain of the carbohydrate
                     esterase 4 superfamily; cl15692"
                     /db_xref="CDD:472828"
ORIGIN      
        1 mrtleankiv dwahyifvsa kagltyasds cdlkryavik gvaqemlsly tephedlprr
       61 vpngenkiyl tfddgpdpvy tpqildllkk ygitgtfflm gervrqhphi vkrivdegha
      121 ignhtythpf millnekeln eelsltdeai rdavgfspvl frppygllnq gtidllrarg
      181 yeimmwseel emydwsfpgv dnmvrlieek tesgsmillh dgggtreetv rtlekvipll
      241 lergfhfaad yleqsrnehg qtaagtar
//
LOCUS       WP_258042436             261 aa            linear   BCT 02-MAR-2025
DEFINITION  type II secretion system F family protein [Paenibacillus sp.
            UNC499MF].
ACCESSION   WP_258042436
VERSION     WP_258042436.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. UNC499MF
  ORGANISM  Paenibacillus sp. UNC499MF
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 261)
  AUTHORS   Peabody,C.R., Chung,Y.J., Yen,M.R., Vidal-Ingigliardi,D.,
            Pugsley,A.P. and Saier,M.H.
  TITLE     Type II protein secretion and its relationship to bacterial type IV
            pili and archaeal flagella
  JOURNAL   Microbiology (Reading) 149 (Pt 11), 3051-3072 (2003)
   PUBMED   14600218
REFERENCE   2  (residues 1 to 261)
  AUTHORS   Py,B., Loiseau,L. and Barras,F.
  TITLE     An inner membrane platform in the type II secretion machinery of
            Gram-negative bacteria
  JOURNAL   EMBO Rep 2 (3), 244-248 (2001)
   PUBMED   11266368
REFERENCE   3  (residues 1 to 261)
  AUTHORS   Stathopoulos,C., Hendrixson,D.R., Thanassi,D.G., Hultgren,S.J., St
            Geme,J.W. 3rd and Curtiss,R. 3rd.
  TITLE     Secretion of virulence determinants by the general secretory
            pathway in gram-negative pathogens: an evolving story
  JOURNAL   Microbes Infect 2 (9), 1061-1072 (2000)
   PUBMED   10967286
REFERENCE   4  (residues 1 to 261)
  AUTHORS   Salmond,G.P. and Reeves,P.J.
  TITLE     Membrane traffic wardens and protein secretion in gram-negative
            bacteria
  JOURNAL   Trends Biochem Sci 18 (1), 7-12 (1993)
   PUBMED   8438237
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11449670
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Paenibacillus sp. UNC499MF"
                     /db_xref="taxon:1502751"
     Protein         1..261
                     /product="type II secretion system F family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /calculated_mol_wt=28753
     Region          98..259
                     /region_name="TadC"
                     /note="Flp pilus assembly protein TadC [Extracellular
                     structures]; COG2064"
                     /db_xref="CDD:441667"
ORIGIN      
        1 mrtdypcalh mrklapagly averfktmer fpdagvrimq rirslyghkd tlfmaklvmg
       61 dmivtallvl lfsallgiag ggdpavlllg llaagltpll vlrqldqkim lrkrrivlel
      121 pevlskmill inagetlqra lirsvdssra aasplhaefg qavrelemnv slpkvledls
      181 krcamqetal ftttillnyr rggedflval rslakelwdr rkaesrklge eassklvfpm
      241 vaiflvvmii vaspavlsin g
//
LOCUS       WP_258042444             900 aa            linear   BCT 02-MAR-2025
DEFINITION  CHASE3 domain-containing protein [Paenibacillus sp. UNC499MF].
ACCESSION   WP_258042444
VERSION     WP_258042444.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. UNC499MF
  ORGANISM  Paenibacillus sp. UNC499MF
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 900)
  AUTHORS   Zhulin,I.B., Nikolskaya,A.N. and Galperin,M.Y.
  TITLE     Common extracellular sensory domains in transmembrane receptors for
            diverse signal transduction pathways in bacteria and archaea
  JOURNAL   J Bacteriol 185 (1), 285-294 (2003)
   PUBMED   12486065
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017077.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05227.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Paenibacillus sp. UNC499MF"
                     /db_xref="taxon:1502751"
     Protein         1..900
                     /product="CHASE3 domain-containing protein"
                     /calculated_mol_wt=100070
     Region          5..538
                     /region_name="CHASE3"
                     /note="Extracytoplasmic sensor domain CHASE3 (specificity
                     unknown) [Signal transduction mechanisms]; COG5278"
                     /db_xref="CDD:444089"
     Region          47..171
                     /region_name="HK9-like_sensor"
                     /note="ligand binding sensor domain of Rhodopseudomonas
                     palustris histidine kinase HK9 and similar proteins;
                     cd19410"
                     /db_xref="CDD:438628"
     Site            order(47,50,60..61,64..65,67..68,71..72,147..148,150,153,
                     156)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:438628"
     Region          <431..898
                     /region_name="TMAO_torS"
                     /note="TMAO reductase sytem sensor TorS; TIGR02956"
                     /db_xref="CDD:274362"
ORIGIN      
        1 mararrfsir wkimsgylli liclgasifa vngrivslqn eidfvtehdi avhditseie
       61 kqlldmetgq rgyvitgddr ylepyekaqa nwltdydtlh glvadnpsqq krleelrsvi
      121 eewiaesgqp viawkkagnt pqiqqyfqed pgkkymdrir vmidtfrste tkltvdrvan
      181 ldernqdmrs alylmmfgva avaiataili srsiqgtisk virainhlas sdgdlserie
      241 vksrdeirdl gdatnrlldn vqreteektq vaelttalqg ftdttalaem fvrkaaelfr
      301 apygvvyvlq tvegeyglhr maayasdggd gerrrmfkpg eglvgqcaee nrmlavdhlp
      361 enyvtvrsgl geaaprhili apasfkgsvt avvefasfep ftasqrqvlr ellssfaiil
      421 nsvgsrmeve rllqesrvma eelqvqseel rtqteemqvt neeleaqyrv seqktleleq
      481 aslelqakae qvqlasqyks eflanmshel rtplnsmlll sqflaenqnn tlsdeelqyv
      541 elihkagndl lalindvldl skveagklev nyapfnltel pdkmehlfgk mledkdvafk
      601 rtiepglpei iqtdgqrleq ivknllsnav kfthygevtl slrrakedee nhllpgldwt
      661 talaisvrdt gigipkdkqe hvfeafrqad gatsrqyggt glglsisrdl agllngcihl
      721 aseegagstf tlyicclera dtasleaasa leaeaaalpa pvkpkreasg rtgtiiagkt
      781 vlivdddprn vkalsvales rgmrvltagd gieclalmdr tpgidvvlmd immpgmdgye
      841 amtrirqree wadlpliavt akamkndrdk cieagasdyi skpvdlnqli sllnvwlnen
//
LOCUS       WP_258042446             352 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Paenibacillus sp. UNC499MF].
ACCESSION   WP_258042446
VERSION     WP_258042446.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. UNC499MF
  ORGANISM  Paenibacillus sp. UNC499MF
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 352)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Paenibacillus sp. UNC499MF"
                     /db_xref="taxon:1502751"
     Protein         1..352
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=37708
     Region          <66..>335
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          295..347
                     /region_name="Dockerin_II"
                     /note="Type II dockerin repeat domain; cd14254"
                     /db_xref="CDD:271213"
     Site            order(300,302,304..306,308..309,311..313,315,343,347)
                     /site_type="other"
                     /note="cohesin binding interface 1 [polypeptide binding]"
                     /db_xref="CDD:271213"
     Site            order(305,312,315,335,337,339..341,343..344,347)
                     /site_type="other"
                     /note="cohesin binding interface 2 [polypeptide binding]"
                     /db_xref="CDD:271213"
ORIGIN      
        1 mtsmsrrisv ilffcfmmqa lsfvtavhas epqpdlvsng gfesvksgag kwaagaepvg
       61 wglwlasgtg kasvtgdvyh tgtqavqleh lalsrtglsq dvpiaggqty klsvwvktkd
      121 vnsgigvfvr tqffksikgf dgktldekig sgpsteeltg tqdwmkrevi inspedakyi
      181 rlepffetgt gtvwfddisl vkwnsvtgla ldqtsvtmdt kqtavltakv tpenvsglsl
      241 qwrvdnkdav qveaqgslav ltalkpgkai vtvmtedgtf aatseitvke agiqgdltnd
      301 gkitvgdlam aaahfgkdts spdwetvkaa dvngdhkidr sdlmwfaeri fp
//
LOCUS       WP_258042457            1019 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Paenibacillus sp. UNC499MF].
ACCESSION   WP_258042457
VERSION     WP_258042457.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. UNC499MF
  ORGANISM  Paenibacillus sp. UNC499MF
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 1019)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 1019)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012234.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00004.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Paenibacillus sp. UNC499MF"
                     /db_xref="taxon:1502751"
     Protein         1..1019
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=111307
     Region          207..469
                     /region_name="spore_V_K"
                     /note="stage V sporulation protein K; TIGR02881"
                     /db_xref="CDD:163057"
     Region          479..742
                     /region_name="spore_V_K"
                     /note="stage V sporulation protein K; TIGR02881"
                     /db_xref="CDD:163057"
     Region          761..1014
                     /region_name="spore_V_K"
                     /note="stage V sporulation protein K; TIGR02881"
                     /db_xref="CDD:163057"
ORIGIN      
        1 maeafqhseg tvlfrgikga dpafisliak lagegsfrtk egvrisaady fivfyvdeha
       61 ereseygqvp avlakllpvs ilqtvlasai sspieretmk qiaeillgka iedlsrdmqt
      121 kiavhpstye aladiaaank tfgeavqhwi dkelipilsg lrarneirgn esvrihfkng
      181 sfvvasnsfe ipikavsfvr qesiddvlee lnaltglepv kkfvyelmet vqvnrlrare
      241 gegsvamslh mvftgnpgtg kttvarligr ilkalgllpq gqlievtrqd lvgqyvgsta
      301 pktmaqvnea lggvlfidea ytlarhdhdt fgieaidtiv kamedhrdql vvvlagytqe
      361 metflrsnpg lrsrfpfive fpdykaadml dimiqmaskn gfrieedaye glielfdqrq
      421 ipgrndsgng rlvrnlfeea vrkqatrlre lmsgaaaaad lqvltgadfg igekeafnie
      481 nelagivgle kvklfvrtle kqlivdrrrk eagihvdtgq tlnmifsgnp gtgkttmarl
      541 vagmlrsmgy lkkghlvevd rsdlvaeyvg qtanktklvv esalggvlfi deayalaqdg
      601 vqgggfgkea idslvrliel hkdnlvvila gytedmqrfv qvnpglssrf plqiefpdyt
      661 agemqqiasi mvkargfsla pgvagllepy fngkqipgrk dggngrlvrn tlegairkqa
      721 erladhpdia adrlneltve dfglsvpvdl avkqasalga lddvvglssv kefvrslsaq
      781 ievakrreel glpkasaqal hmvfkgnpgt gkttiarila qrfkelgvtk adtlvetdrs
      841 glvagyvgqt alktkevier alggilfvde ayalaegdqf gqeaidtlvk amddyrdrli
      901 vilagydedm erflnrnagl rsrfpnmitf pdytagemlq iarllvkaqg yvivpeaeaa
      961 llsiletyeg drtagngrlv rnlvekairg halrmsmkad ataeelsalm pedfqgktg
//
LOCUS       WP_258042483             181 aa            linear   BCT 02-MAR-2025
DEFINITION  PilZ domain-containing protein [Paenibacillus sp. UNC499MF].
ACCESSION   WP_258042483
VERSION     WP_258042483.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. UNC499MF
  ORGANISM  Paenibacillus sp. UNC499MF
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 181)
  AUTHORS   Galperin,M.Y. and Chou,S.H.
  TITLE     Structural Conservation and Diversity of PilZ-Related Domains
  JOURNAL   J Bacteriol 202 (4), e00664-19 (2020)
   PUBMED   31740493
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 181)
  AUTHORS   Paul,K., Nieto,V., Carlquist,W.C., Blair,D.F. and Harshey,R.M.
  TITLE     The c-di-GMP binding protein YcgR controls flagellar motor
            direction and speed to affect chemotaxis by a 'backstop brake'
            mechanism
  JOURNAL   Mol Cell 38 (1), 128-139 (2010)
   PUBMED   20346719
REFERENCE   3  (residues 1 to 181)
  AUTHORS   Benach,J., Swaminathan,S.S., Tamayo,R., Handelman,S.K.,
            Folta-Stogniew,E., Ramos,J.E., Forouhar,F., Neely,H.,
            Seetharaman,J., Camilli,A. and Hunt,J.F.
  TITLE     The structural basis of cyclic diguanylate signal transduction by
            PilZ domains
  JOURNAL   EMBO J 26 (24), 5153-5166 (2007)
   PUBMED   18034161
REFERENCE   4  (residues 1 to 181)
  AUTHORS   Ryjenkov,D.A., Simm,R., Romling,U. and Gomelsky,M.
  TITLE     The PilZ domain is a receptor for the second messenger c-di-GMP:
            the PilZ domain protein YcgR controls motility in enterobacteria
  JOURNAL   J Biol Chem 281 (41), 30310-30314 (2006)
   PUBMED   16920715
REFERENCE   5  (residues 1 to 181)
  AUTHORS   Amikam,D. and Galperin,M.Y.
  TITLE     PilZ domain is part of the bacterial c-di-GMP binding protein
  JOURNAL   Bioinformatics 22 (1), 3-6 (2006)
   PUBMED   16249258
REFERENCE   6  (residues 1 to 181)
  AUTHORS   Alm,R.A., Bodero,A.J., Free,P.D. and Mattick,J.S.
  TITLE     Identification of a novel gene, pilZ, essential for type 4 fimbrial
            biogenesis in Pseudomonas aeruginosa
  JOURNAL   J Bacteriol 178 (1), 46-53 (1996)
   PUBMED   8550441
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018894.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07238.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Paenibacillus sp. UNC499MF"
                     /db_xref="taxon:1502751"
     Protein         1..181
                     /product="PilZ domain-containing protein"
                     /GO_function="GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /calculated_mol_wt=20455
     Region          <25..176
                     /region_name="YcgR"
                     /note="Cyclic di-GMP-binding flagellar brake protein
                     FlgZ/YcgR, contains PilZNR(YcgR) and PilZ domains [Cell
                     motility]; COG5581"
                     /db_xref="CDD:444320"
ORIGIN      
        1 mdffsvhvyf elanpldkle qisfiefsfq dqginyysfv dlvqldpgvs scvlklvspq
       61 elysyqnrrh crkplpphtt atcrvigarq rsaeetqafk gqlleisrsg tsmitpyrmt
      121 eslmlelsfh lpeveaplll tgevrsstpf ssdsyrvgie fhdvplssln lidtyceqts
      181 s
//
LOCUS       WP_258042521            1816 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerophosphodiester phosphodiesterase family protein
            [Paenibacillus sp. UNC499MF].
ACCESSION   WP_258042521
VERSION     WP_258042521.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. UNC499MF
  ORGANISM  Paenibacillus sp. UNC499MF
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (residues 1 to 1816)
  AUTHORS   Kim,H. and Farrand,S.K.
  TITLE     Characterization of the acc operon from the nopaline-type Ti
            plasmid pTiC58, which encodes utilization of agrocinopines A and B
            and susceptibility to agrocin 84
  JOURNAL   J Bacteriol 179 (23), 7559-7572 (1997)
   PUBMED   9393724
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03009.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Paenibacillus sp. UNC499MF"
                     /db_xref="taxon:1502751"
     Protein         1..1816
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /GO_function="GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=194180
     Region          41..216
                     /region_name="DOMON_like"
                     /note="Domon-like ligand-binding domains; cl14783"
                     /db_xref="CDD:472705"
     Site            order(108,127,194)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:187675"
     Region          642..812
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cl22861"
                     /db_xref="CDD:473984"
     Region          1046..1281
                     /region_name="UgpQ"
                     /note="Glycerophosphoryl diester phosphodiesterase [Lipid
                     transport and metabolism]; COG0584"
                     /db_xref="CDD:440349"
     Region          1629..1669
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          1688..1728
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          1760..1800
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
ORIGIN      
        1 mslvltaall cgtaplglfd gaahaadpgr keldvrktlt ppvidgride slwnvsetmn
       61 vrtgegtfkn arfgmlwdnk ylyigvkaed dtlfpggtgy wfeqdavnff fdptlhqsap
      121 faaddmqagf vyrpgstpef hfgaalgnhs gkdekkilra iaagqdgwtl etaipwemlr
      181 fdaglqkqlg feigvtdrye adtskqrtsy wsafnsksfw ndtagygiln lkdenpvsal
      241 idpvllqdnf dgyapgqtpa gwisdvnags dpftvvqdty gngrmnfdgk asgkqarisa
      301 pvqwddytve advrfegvln darwaalmfr gaadgknpyn qmavrrngtf elayrmpnnn
      361 wasptpvsgm wkpleldkey tlkvravgnn vkeyikakde adftllmdqn fssnllekgk
      421 vgfqadqskv sfdnlkvtrv taerldvtip gtlealtgpa tvtgsvyysd gltevpapga
      481 irlyssdesv vkivnnqlyp vkagkaavka vyanaeaare itvtpsatga qavklqhaeg
      541 yvltdtgakl dlstvsfqae fsdfskgtlk ggellwkpag qeisvsggtl qvntkgaypv
      601 tvqkdnaslt lmviaknpge keytlyeenf dqaaegtlpk dwtrkegtta saaavksgaf
      661 emnasaapdn psrvllpeyl glfgnykiea dithlsanda arwnsimfri qndnipyyqm
      721 avrqnaaavn gvefaertpa newnvmdrgs yteaidsakm yrytvkayne rvqewigdkl
      781 lvdtdnagay kkgrigfqan gsrmkvdnir vtlqqdalpp lpserfvqvv epetkislap
      841 tvvmelqssa dlvklqgtsl patamlyvng nlkitapgga eigslddila alnnkvipaf
      901 yvrdeastdk lvealkargi edafivsdkg glvkkarqay piirgildfr qakadtseel
      961 meirrqttvn lakiallsgk aatrenmayl qqralvvwaq dqssqkdktv slhtlitgga
     1021 ngivtdapea avgalklysn gttlirkpyi ighrgipsea pentiesnal sieygadfie
     1081 ndmyltkdge lvivhdsvle nttngkgrve dftlaelkkl nankpfpngy pdvkiptlde
     1141 qidlarskgr mvmaeiktst paavdafvri ikekkaedlv damsfdtnql krlaelmpem
     1201 psglltsgya neanvnkslr etlkvlqpln atfntsyggl gknfmeaakh rgviispwtf
     1261 nnkndfikff glgafgittd yaswsadwaa svkpgksays lspgekatls levesyrgtk
     1321 tnaapdivll dgqdvvdvsg sqitakkagk ahallrytas idaankydly tqpvtvevkg
     1381 ggsdggnggg dngsggnngn ngnngnnggn nngnngnngn nggnngnnga gkvtasggav
     1441 dasalrealk thptveiayt gdtveipasa lmdaspgnrt lvisgpvgky tvqlrdlkld
     1501 eaarrlggea rgmtvrytlr yagdsdaaai gtavkaaglq sggtpvqlei aakaqsggsa
     1561 aletkgqlel ildgtfdakr atgvrvypne kkfsfapslf apagtaktav tfkrsgsgfy
     1621 avvsgapvfa dmtghwaqad vellaaklvv egsgggrfda ergitraefa allvralglp
     1681 qaagpaafgd vgsadwfagd vaaaaaagli ggyedgsfrp qrpitreeqa amlvralpya
     1741 gaasaaalte pqreeilary tdsgkigwaq aevaaavhag lmngmtdgtl apegeatraq
     1801 saamlrrflv tagfin
//
LOCUS       WP_258042179             540 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA-binding protein [Klebsiella pneumoniae].
ACCESSION   WP_258042179
VERSION     WP_258042179.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 540)
  AUTHORS   Ilangovan,U., Wojciak,J.M., Connolly,K.M. and Clubb,R.T.
  TITLE     NMR structure and functional studies of the Mu repressor
            DNA-binding domain
  JOURNAL   Biochemistry 38 (26), 8367-8376 (1999)
   PUBMED   10387082
REFERENCE   2  (residues 1 to 540)
  AUTHORS   Harshey,R.M., Getzoff,E.D., Baldwin,D.L., Miller,J.L. and
            Chaconas,G.
  TITLE     Primary structure of phage mu transposase: homology to mu repressor
  JOURNAL   Proc Natl Acad Sci U S A 82 (22), 7676-7680 (1985)
   PUBMED   2999776
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014380.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02316.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..540
                     /product="DNA-binding protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=60729
     Region          7..137
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Region          <258..512
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 mfatvnelvg lpglpgtpqg irammgklvk dnqalvrkrq gskafeyhid slppvtqkal
       61 rdrqvkelmk nqdaalpspe rsavmeksns rlslyrdhpv lmeqkltglt adqqktadar
      121 ialvsevlkl geipgfscak aireivrqsr ngelpehlat qvtlanakkg ssrtlseisl
      181 krwmadfkka rtsterlvll apgkrqrvep eeiawlpdfl ayyrnpngvt maeayddfik
      241 gwytryadqp emlfsapsyn tvryamdklp evvkqhrrit gsearqlegf vrrdwlclpv
      301 nyvwigdghg mkmkvahpdh gkpfspevtf ildgscrfiv gwslalsesv iavadalrhg
      361 irnngvpyiy ysdngggetn ntfdanitgi lprlgvdhrl gipenpqgrg iieilnktlg
      421 mrisrqfaty ygtgadkstv rrvsksltaa lnavdkgrel takqeqtlre fpswnelige
      481 ieagikwynn rphealplkg ngehftpaqf rkyklekekt eiewlsdael rhgfmpqrlc
//
LOCUS       WP_258042528             485 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Paenibacillus sp. UNC499MF].
ACCESSION   WP_258042528
VERSION     WP_258042528.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. UNC499MF
  ORGANISM  Paenibacillus sp. UNC499MF
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Paenibacillus sp. UNC499MF"
                     /db_xref="taxon:1502751"
     Protein         1..485
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=51351
     Region          26..426
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(33..34,37..38,41,72,122..123,125..127,130,150,
                     153..154,157,232,235..236,239..240,252,255,322,326,
                     383..384,388,392,408,411..412,415..416,421)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:341045"
ORIGIN      
        1 mevrkttntk qtgifdtsyr altigimlvl tttafeglai ttiapklaqs lqgihlygwi
       61 fssfllsqlv gtlvmgqqvd krgvftsllv scgifvlgtv vaavslnmhi liagralqgf
      121 gagalstciy asvtlhypda lrtrilaafs mafilpslig pyvagliasy iswrfvfwiv
      181 lplivlalsl tfrsfralqh rqglsgkaht gpaqtsgskv ihavllavgt glmltglgmi
      241 tdwegivltl vglfimipll rkllppgtfs vkkglpatlv srglyvacyf atesfvilal
      301 tevkgvsaqf agllvaagsl swsaaawlqs kldardrgrg rkqrvmlgig imisgtvlvi
      361 lalilpgggi klillsqmit gfgvglanpt tgtialqhae pgkegevsaa lqfmdsfcig
      421 vsigvsgali alaetlqwgv sngilivltl qlvfvmlsfl asvrimelih pehhavshak
      481 nklpm
//
LOCUS       WP_258042618             287 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin dinucleotide binding domain-containing protein
            [Escherichia coli].
ACCESSION   WP_258042618
VERSION     WP_258042618.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 287)
  AUTHORS   Hochheimer,A., Hedderich,R. and Thauer,R.K.
  TITLE     The formylmethanofuran dehydrogenase isoenzymes in Methanobacterium
            wolfei and Methanobacterium thermoautotrophicum: induction of the
            molybdenum isoenzyme by molybdate and constitutive synthesis of the
            tungsten isoenzyme
  JOURNAL   Arch Microbiol 170 (5), 389-393 (1998)
   PUBMED   9818358
REFERENCE   2  (residues 1 to 287)
  AUTHORS   Schneider,F., Lowe,J., Huber,R., Schindelin,H., Kisker,C. and
            Knablein,J.
  TITLE     Crystal structure of dimethyl sulfoxide reductase from Rhodobacter
            capsulatus at 1.88 A resolution
  JOURNAL   J Mol Biol 263 (1), 53-69 (1996)
   PUBMED   8890912
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013717.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01568.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..287
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /calculated_mol_wt=32227
     Region          1..>56
                     /region_name="AANH_superfamily"
                     /note="Adenine nucleotide alpha hydrolase (AANH)
                     superfamily; cl00292"
                     /db_xref="CDD:469708"
     Region          <40..287
                     /region_name="dmsA_ynfE"
                     /note="anaerobic dimethyl sulfoxide reductase, A subunit,
                     DmsA/YnfE family; TIGR02166"
                     /db_xref="CDD:274006"
ORIGIN      
        1 maykhigvai sgneedallv nkalelarhn dahltlihvs evakrlgpdv yqtftegrsq
       61 hewikylhak tkernpempd yeemkttgif kkkcpeehyv afrafredpq anplktpsgk
      121 ieiyserlak iadtwelkkd eiihplpayt pgfdgwddpl rktyplqltg fhykarthss
      181 ygnidvlqqa cpqevwinpi daqargirhg dtvrvfnnng emliaakvtp rilpgvtaig
      241 qgawlkadmf gdrvdhggsi niltshrpsp lakgnpshsn lvqiekv
//
LOCUS       WP_258042638             189 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Escherichia coli].
ACCESSION   WP_258042638
VERSION     WP_258042638.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 189)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 189)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>189
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          <1..>189
                     /region_name="VI_Rhs_Vgr"
                     /note="type VI secretion system Vgr family protein;
                     TIGR03361"
                     /db_xref="CDD:274542"
ORIGIN      
        1 wsplfsephp srefcvqyge tdydflcrma aeegiffyee haykstdqsl vlcdtvrhlp
       61 esfeipwnpn trtevstlci sqfrysaqir pssvvtkdyt fkrpgwpgrf dqegqyqdyq
      121 rtqyevydyp grfkgahgqn farwqmdgwr nnaevargts rspeiwpgrr ivltghpqan
      181 lnrewqvva
//
LOCUS       WP_258042651             159 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein,
            partial [Escherichia coli].
ACCESSION   WP_258042651
VERSION     WP_258042651.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 159)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..159
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
     Region          <1..158
                     /region_name="PRK10795"
                     /note="penicillin-binding protein 2; Provisional"
                     /db_xref="CDD:236761"
ORIGIN      
        1 dgivkvphll mstaedgkqv pwvqpheppv gdihsgywel akdgmygvan rpngtahkyf
       61 asapykiaak sgtaqvfglk anetynahki aerlrdhklm tafapynnpq vavamileng
      121 gagpavgtlm rqildhimlg dnntdlpaen pavaaaedh
//
LOCUS       WP_258042634             169 aa            linear   BCT 02-MAR-2025
DEFINITION  phospholipase D-like domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_258042634
VERSION     WP_258042634.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13091.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>169
                     /product="phospholipase D-like domain-containing protein"
     Region          44..>169
                     /region_name="PLDc_ymdC_like_1"
                     /note="Putative catalytic domain, repeat 1, of Escherichia
                     coli uncharacterized protein ymdC and similar proteins;
                     cd09111"
                     /db_xref="CDD:197210"
     Site            order(150,152,165,167)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197210"
     Site            150
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197210"
ORIGIN      
        1 mmkktptstk dslpnkemnd lprlasavlp lcsqhpgqcg lfplekslda faaryrlaem
       61 aehtldvqyy iwqddmsgrl lfsallaaak rgvrvrllld dnntpglddi lrlldshpri
      121 evrlfnpfsf rllrplgyit dfsrlnrrmh nksftvdgvv tlvggrnig
//
LOCUS       WP_258042656             155 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-insensitive murein endopeptidase, partial [Escherichia
            coli].
ACCESSION   WP_258042656
VERSION     WP_258042656.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03411.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>155
                     /product="penicillin-insensitive murein endopeptidase"
                     /GO_component="GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA]"
                     /GO_function="GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          1..>155
                     /region_name="Peptidase_M74"
                     /note="Penicillin-insensitive murein endopeptidase;
                     cl01538"
                     /db_xref="CDD:470243"
ORIGIN      
        1 aslaatpwqk itqpvpgsaq sigsfsngci vgadtlpiqs ehyqvmrtdq rryfghpdlv
       61 mfiqrlssqv snlgmgtvli gdmgmpaggr fngghashqt gldvdiflql pktrwtsaql
      121 lrpqaldlvs rdgkhvvptl wkpeifslik laaqd
//
LOCUS       WP_258042620            1130 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5704 domain-containing protein [Paenibacillus sp. UNC499MF].
ACCESSION   WP_258042620
VERSION     WP_258042620.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus sp. UNC499MF
  ORGANISM  Paenibacillus sp. UNC499MF
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040151.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18964.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1130
                     /organism="Paenibacillus sp. UNC499MF"
                     /db_xref="taxon:1502751"
     Protein         1..1130
                     /product="DUF5704 domain-containing protein"
                     /calculated_mol_wt=123868
     Region          146..236
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); pfam02368"
                     /db_xref="CDD:396788"
     Region          <280..316
                     /region_name="BID_2"
                     /note="Bacterial Ig-like domain 2; smart00635"
                     /db_xref="CDD:214752"
     Region          392..559
                     /region_name="DUF5704"
                     /note="Family of unknown function (DUF5704); pfam18964"
                     /db_xref="CDD:436871"
ORIGIN      
        1 mywyqldsgg frvdysggrs dvgwngdcyn prpaytkipd dvnlskwaaq iwkdergriv
       61 kaenvakahl dsveyepsns ydpanikpdi tgdetalirt ntggnkvpty leefmkrpng
      121 cpkmiveydt pvmitwagdi yeekeitatp dstisvgqki qlqanvktkd wgasdwgkey
      181 dvaarttett wksedetiaa vnasgqvqgk kagkvkirat wdngdyrisd taeitvttdp
      241 glvinlpqpd fctsdsspqq aeavltkpdg tswslqkhdk ltwtssnpsi aaidqsgkit
      301 lkaavgttqi tahfkddlqh ldekktvtlt vkdcgssggg npgtgnpqpp ggtngcspvi
      361 nppakgasqn gtsmnpqasg mlradkrgae tfnvlegipt seslyanafs lqylfqnkft
      421 nitgevtynv pvtktyvwtv pvpppgipip msqtvtqtmt vkrpygywqi dnleiyrpqk
      481 vqfsnyalgg yggsvtmdak nytppvitss nkddvsahvk psncnsvnlg tgggppmnet
      541 glfqaaaeaa vgankvsndl lvfngvtlmd drihdaaapl pkpipeparl gadtfygtgy
      601 miskslanrq nqptsaiiay tllpgnikgg adktfeipgi npvtvhtpvi mvpsvsddqa
      661 hnqktspaye rsalildrpf svtipttgph rgipgyetrd fakynrqkqv wfpfdtydas
      721 mkfipkdtwi dipvgqlsst fympvwvdeg pysvlfrsia enapasftte pqanldltnh
      781 vatdtvrvdv igrlydfkvt diadynwesv frtakgsaah tetnywvgak gidgqprptg
      841 ypfilpihpg shpeagykni avktgyhikf dlktkgnmfg pddgvritpa fyfvsneggk
      901 rqpvdlyyht enqpfvrigs qqdeekrfvv lndrlrnvst qeleqtagyl fdqspgsftn
      961 ralftadylk kaakpawvgt yhwlilsrqv rtfiggtqni pagvdearvl asdqkwygey
     1021 slpaavyavp katdlaaygr sqtlddrspi flrngyivvn fniesiragd vnrpylqyih
     1081 gplnnqwqle ggvqsvtdak ghtfpvtdgd vvfyhgdlss yddfgsngth
//
LOCUS       WP_258042666             673 aa            linear   BCT 02-MAR-2025
DEFINITION  S6 family peptidase, partial [Escherichia coli].
ACCESSION   WP_258042666
VERSION     WP_258042666.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 673)
  AUTHORS   Maldonado-Contreras,A., Birtley,J.R., Boll,E., Zhao,Y., Mumy,K.L.,
            Toscano,J., Ayehunie,S., Reinecker,H.C., Stern,L.J. and
            McCormick,B.A.
  TITLE     Shigella depends on SepA to destabilize the intestinal epithelial
            integrity via cofilin activation
  JOURNAL   Gut Microbes 8 (6), 544-560 (2017)
   PUBMED   28598765
REFERENCE   2  (residues 1 to 673)
  AUTHORS   Johnson,T.A., Qiu,J., Plaut,A.G. and Holyoak,T.
  TITLE     Active-site gating regulates substrate selectivity in a
            chymotrypsin-like serine protease the structure of haemophilus
            influenzae immunoglobulin A1 protease
  JOURNAL   J Mol Biol 389 (3), 559-574 (2009)
   PUBMED   19393662
REFERENCE   3  (residues 1 to 673)
  AUTHORS   Henderson,I.R., Czeczulin,J., Eslava,C., Noriega,F. and Nataro,J.P.
  TITLE     Characterization of pic, a secreted protease of Shigella flexneri
            and enteroaggregative Escherichia coli
  JOURNAL   Infect Immun 67 (11), 5587-5596 (1999)
   PUBMED   10531204
REFERENCE   4  (residues 1 to 673)
  AUTHORS   Benjelloun-Touimi,Z., Si Tahar,M., Montecucco,C., Sansonetti,P.J.
            and Parsot,C.
  TITLE     SepA, the 110 kDa protein secreted by Shigella flexneri: two-domain
            structure and proteolytic activity
  JOURNAL   Microbiology (Reading) 144 (Pt 7), 1815-1822 (1998)
   PUBMED   9695914
REFERENCE   5  (residues 1 to 673)
  AUTHORS   Stein,M., Kenny,B., Stein,M.A. and Finlay,B.B.
  TITLE     Characterization of EspC, a 110-kilodalton protein secreted by
            enteropathogenic Escherichia coli which is homologous to members of
            the immunoglobulin A protease-like family of secreted proteins
  JOURNAL   J Bacteriol 178 (22), 6546-6554 (1996)
   PUBMED   8932311
REFERENCE   6  (residues 1 to 673)
  AUTHORS   Bachovchin,W.W., Plaut,A.G., Flentke,G.R., Lynch,M. and
            Kettner,C.A.
  TITLE     Inhibition of IgA1 proteinases from Neisseria gonorrhoeae and
            Hemophilus influenzae by peptide prolyl boronic acids
  JOURNAL   J Biol Chem 265 (7), 3738-3743 (1990)
   PUBMED   2105953
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014452.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02395.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>673
                     /product="S6 family peptidase"
                     /GO_function="GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          1..50
                     /region_name="ESPR"
                     /note="Extended Signal Peptide of Type V secretion system;
                     pfam13018"
                     /db_xref="CDD:463773"
     Region          58..666
                     /region_name="Peptidase_S6"
                     /note="Immunoglobulin A1 protease; pfam02395"
                     /db_xref="CDD:396804"
ORIGIN      
        1 mnkiyslkys sltggliavs elskkvkgkt grklmtasva lsvslsalpa eastvsaeip
       61 yqtfrdfaen kgvftpgatg ieikdkngna vgtldvpmid fssvsrrgsl tllsqgygvs
      121 akhgglgdvn nasfgydknn ytvvknnkhs gldfslhrfs kliteaapad inisgqlsds
      181 sqytafyrag agtqyikers gkqthipgtf ltggtvgtpw ysgnnlisss pgdtynksqg
      241 plasygqmgd sgsplfayns lsekwslagv tlhnngvngq knnwlllped yikniitadf
      301 dpiisfnkns kehmswtyda akgvgriqqd dqqfvmhgnl ngnlnagknl yftgengiid
      361 lkdnvnqgag ylqfaddytv ttsndsswsg ggiivnygtt vkwgingvsg ddlhkvgdgt
      421 liingtgkne gglkigagtv ileqkeknnd stafssinis ggnsrvklsg dnqiipdnvs
      481 wgfrggyldi ngkntefsrl qavdygaaii nsstdksllt lnlsplkkde iavsvkvldm
      541 naifqgghgt agdlykttfy gptqyyllkk pkfgsvlmgs lkntsewqfa gtdlnqavdm
      601 aknnkltssa qasylyhgkl lgnmdivipe ltgndiltld gsvsisgdms kqdgalifqg
      661 hplihagqtv sas
//
LOCUS       WP_258042703             964 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Mycobacterium
            kansasii].
ACCESSION   WP_258042703
VERSION     WP_258042703.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 964)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..964
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         <1..964
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..>960
                     /region_name="PRK12316"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237054"
ORIGIN      
        1 vgvddsffdl ggdsisaiqv aararaagie crprdlftlq svagiagaar lngdaasgav
       61 ddcagevpat piirwlesvq gpvgqfnqmv lvqapagvtk ddvvvllqal ldrhamlrlq
      121 vadgstghws lwvpepgsva apsrlqvvpe msetalaaar srlnpaagem lsalwvanag
      181 qlllvihhla vdavswrill ddlnnawnqh rrgqrvvlss rgtsfrrwas llgeyaqrhe
      241 vvaqvsawqq vmmpgaempa vqpavdtfas aghmsasldv ettrmltddv paafhariqe
      301 illiayalaw waffgedagr ividveghgr qdelapgidl shtvgwfttk ypvavavetd
      361 lrwtdvvagg aalgvvikna keqlralpdg ltygllrylt aqneqielaa adppigfnyl
      421 grlgehaqav taddswqicy galpvnemse agydmplmht vevnaatvnt pagpqlhaew
      481 twapskvdra qitrisqlwf ealrgicahv rtggggltps dvlparlsqq qidelgrqyr
      541 iadvvpltpl qqamlsfagr phgladayvv qvgitltgql dqhrlrrave illerhpnla
      601 arfiteglde pvqiipanpi aqwryaefaa aeqhdverlc aaerqavtdl tnngplraal
      661 lrraqnrhlf lltthhivcd gwslqimlrd ifacyheqel prpvayrrfl twlaardhaa
      721 acaawrklfs gfhtptlvgp pnrsrlaegr vrsfqlpvet tdaltrlars htttintvlq
      781 aawaqvlvwl tghhdvafgt tvsgrpaela gaqsmvglla ntvpvraits vtttttells
      841 qlkqaqhdtl ehqylaladi tdgcgqdplf dtllvfqnyp venftvggad elaiteitgy
      901 efshyplavr vspgrqlnlr vefagdvfda sgieliirrl rqlldimaay pdkplraiel
      961 rhet
//
LOCUS       WP_258042707             438 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Mycobacterium
            kansasii].
ACCESSION   WP_258042707
VERSION     WP_258042707.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 438)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         <1..>438
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..98
                     /region_name="entF"
                     /note="enterobactin non-ribosomal peptide synthetase EntF;
                     PRK10252"
                     /db_xref="CDD:236668"
     Region          113..>438
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation domain of nonribosomal
                     peptide synthetases (NRPSs) and similar domains; cd19540"
                     /db_xref="CDD:380463"
ORIGIN      
        1 tvngkldira lpapeyldss ryraptgpve eilagsyarv lglervgvdd sffdlggdsi
       61 lamrviavin taldcdlrvr tlfdaptiae lasridaegg gveplvager psvvplsfaq
      121 srlwfldqlh gpapvynmav glrlrgelea dalgvaladv vgrheilrtv istlqgmprq
      181 lvlppeqaef gweimdargw pkarlaaaia etarrtfnlt adiplrarlf rithdehvlv
      241 aavhhiaadg wsvtplvrdl gvayasrcag qapgwtelpv qyadytlwqr aqfgglddsd
      301 splaaqlrfw edalagmper lqlptdrpyp pvadhrgata tvgwsaelhq rvraaarehn
      361 vtsfmvvqaa lvvllsklsa ssdvavgfpi agrrdpalnd lvgcfvntlv lrvdlggdpt
      421 aaevlaqvre rslaayeh
//
LOCUS       WP_258042779             792 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 9 protein [Xylanibacter ruminicola].
ACCESSION   WP_258042779
VERSION     WP_258042779.1
KEYWORDS    RefSeq.
SOURCE      Xylanibacter ruminicola
  ORGANISM  Xylanibacter ruminicola
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Prevotellaceae; Xylanibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012961.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00759.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Xylanibacter ruminicola"
                     /db_xref="taxon:839"
     Protein         1..792
                     /product="glycoside hydrolase family 9 protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=90794
ORIGIN      
        1 mnemrhyfhs flaglfllsa spaeatklig lkvidkdylm vhfrdgevhy rddgtgpsay
       61 lghsfaegdd tlivfgerlr lpeaqqtalw qisstddkaf vashplkvwr kskpmntdht
      121 ltsecdhwlf lqlpqsmkqg cnytvnipsg igsdqssatv cfdiwntmse avhvniigys
      181 pteqihaadl yqwlgdggqr dyrswegrkv ylyniktnkk knvgvvkfwk qaseakneag
      241 eknligtdvw nidfksavpg ryrlvvedvg csmdfdiasd iyyqpfrysv rgyyymrlse
      301 pkdpehvwpv prqpqfipet dpkgftvykt dfhpfcqewr dlrtdvwdep hfkslkdsrf
      361 wqhrlpgnpv ntevkgghsd afdwdrhlah vsniydmllp yilsggrlsd dnlgiresgn
      421 gipdiidear nevdfflsir dgeaysqgvt npcadwsvmf qagcttmaaw anaancailg
      481 eafrlqknds lqkyytdeai kafryaskqe wnqlddlqdi gsmqmrgrdf rqlasaflyn
      541 ltgdeqwekv fveesmiksp qspifskgrh gffgvgvmhe enkdlvpfcq iwaaaayltc
      601 phqrhfadvy qnlkssinaq aetynishma krpsrrtand drwqvsqnlq lvmmahyiad
      661 kphkkelehv myteaswamg rnpgnivemt glgerhitdc yttgrndgap eshpgqtpfn
      721 gtetwspghn ggdarvilky cypewnvnsk dnswprqesy fnqryfwvng eftpretmrg
      781 kmallgylya ir
//
LOCUS       WP_258042781             266 aa            linear   BCT 02-MAR-2025
DEFINITION  flavodoxin [Xylanibacter ruminicola].
ACCESSION   WP_258042781
VERSION     WP_258042781.1
KEYWORDS    RefSeq.
SOURCE      Xylanibacter ruminicola
  ORGANISM  Xylanibacter ruminicola
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Prevotellaceae; Xylanibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024094.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12682.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Xylanibacter ruminicola"
                     /db_xref="taxon:839"
     Protein         1..266
                     /product="flavodoxin"
                     /GO_function="GO:0010181 - FMN binding [Evidence IEA]"
                     /calculated_mol_wt=28883
     Region          21..152
                     /region_name="FMN_red"
                     /note="NADPH-dependent FMN reductase; cl00438"
                     /db_xref="CDD:469770"
ORIGIN      
        1 mkklllslvm ttcitagyaq kklvlyfseg gttkvvaeel qkqldadies ieavepysgd
       61 fqatiqrsnk erqsgqmpal kplksniady diiflgypiw ggtyalpiat llkeqnfdgk
      121 tivpfcsfgs gglntssadl kkalpnakiq kgygvraarv daaakeldrf lkengykegv
      181 vsklpeysaq qpvteeekai fdaacssyqf plgtpstvgk ritddstdyq ftvkgrgmng
      241 eeavstifvt vgkeegakpe ftevvr
//
LOCUS       WP_258042810             146 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Sphingomonas sp. NBWT7].
ACCESSION   WP_258042810
VERSION     WP_258042810.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas sp. NBWT7
  ORGANISM  Sphingomonas sp. NBWT7
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 146)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Sphingomonas sp. NBWT7"
                     /db_xref="taxon:2596913"
     Protein         1..146
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=15024
     Region          11..>145
                     /region_name="YaeI"
                     /note="Predicted phosphohydrolase, MPP superfamily
                     [General function prediction only]; COG1408"
                     /db_xref="CDD:441018"
ORIGIN      
        1 mprapallry lagvsivval ailiggwraa hrdpvvrrvt lalpdwprga ppirvalgsd
       61 ihagggavpa drlvrmidri aatspalvil agdfvdgrag rtaraaapsl aaalrrlhpp
      121 lgtiavlgnh dndsdpaava ravrrc
//
LOCUS       WP_258042860             178 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Xylanibacter ruminicola].
ACCESSION   WP_258042860
VERSION     WP_258042860.1
KEYWORDS    RefSeq.
SOURCE      Xylanibacter ruminicola
  ORGANISM  Xylanibacter ruminicola
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Prevotellaceae; Xylanibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024831.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13439.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Xylanibacter ruminicola"
                     /db_xref="taxon:839"
     Protein         1..178
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=20478
     Region          2..>172
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mkicvigtrg fpniqggvek hcealyplla knneivafrr kpyvtdkvts yrnirfidlp
       61 stkvkgfeav fhsllatvya vflrpdvvhi hnigpalfap ilkafgikmv ltyhsanyeh
      121 ekwgwfsrhl lmmcekialg cadsiifvnk fqmekfceki rrksyyvpng iprrnnre
//
LOCUS       WP_258042712             875 aa            linear   BCT 02-MAR-2025
DEFINITION  glutamate synthase central domain-containing protein, partial
            [Staphylococcus chromogenes].
ACCESSION   WP_258042712
VERSION     WP_258042712.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus chromogenes
  ORGANISM  Staphylococcus chromogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 875)
  AUTHORS   van den Heuvel,R.H., Ferrari,D., Bossi,R.T., Ravasio,S., Curti,B.,
            Vanoni,M.A., Florencio,F.J. and Mattevi,A.
  TITLE     Structural studies on the synchronization of catalytic centers in
            glutamate synthase
  JOURNAL   J Biol Chem 277 (27), 24579-24583 (2002)
   PUBMED   11967268
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016768.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04898.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Staphylococcus chromogenes"
                     /db_xref="taxon:46126"
     Protein         1..>875
                     /product="glutamate synthase central domain-containing
                     protein"
                     /GO_function="GO:0015930 - glutamate synthase activity
                     [Evidence IEA]"
                     /GO_process="GO:0008152 - metabolic process [Evidence
                     IEA]"
     Region          1..>875
                     /region_name="GltB1"
                     /note="Glutamate synthase domain 1 [Amino acid transport
                     and metabolism]; COG0067"
                     /db_xref="CDD:439837"
ORIGIN      
        1 msnnltyaqn glydgreehd acgigfyanm dnershhive kslemlrrld hrggigadgi
       61 tgdgagimte ipyayfdaqv afelpqegdy avgmyfvnqd lsdatlgqqv anifkseglq
      121 llgfrqvpvd tsclaehvaq tmpiiqqmfv gnvsannfdr alylarkqie qlsakegwdl
      181 yftslsrrti vykgwlrsdq ikklyqdlqh edyvskfgsv hsrfstntfp swkrahpnrl
      241 lmhngeinti qgnvnwmrar qqrliktvfg dearkvqhil detgsdsaiv dnaleflsla
      301 mppeqaamll ipepwlynes ndpnvrafye fysylmepwd gptmisfcdg dklgaltdrn
      361 glrpgrytit tnneiifsse vgvvdvdetd vvykgqlnpg klllvdfnqn kvignealkq
      421 qiacqhpyqa wlteqrpsld lasveytdle mskdevfrqq qrfgytkeei dkyltelmtg
      481 gkdpigamgy daplavlneq peslfnyfkq lfaqvtnppi dayrekivts emtylggegn
      541 llkpgpdalq riqlkhpvlt aqqlehiath alktayfstg ythnlkealn klgeavteav
      601 qqgvevivle dqsvrdetqy ampmllavsh ihqllirkql rmqtslvams gemrevhhla
      661 cligyganat vpylaqktia dlttagrlqg dvtanvekln tifseglikv makmgistvq
      721 syhgaqifea vglgdeviqs yfpgtpskls gisietidae nkrrqtvdsp ylapgstfqw
      781 rqqgqyhtfn pmtiqllqha crdndyaqfk rfsevantht tshlrdlfdf kaqvaiplne
      841 vepvekivtr fktgamsygs isqeahqtla eamnr
//
LOCUS       WP_258042893             223 aa            linear   BCT 02-MAR-2025
DEFINITION  porin [Sphingomonas sp. NBWT7].
ACCESSION   WP_258042893
VERSION     WP_258042893.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas sp. NBWT7
  ORGANISM  Sphingomonas sp. NBWT7
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024996.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13609.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Sphingomonas sp. NBWT7"
                     /db_xref="taxon:2596913"
     Protein         1..223
                     /product="porin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015288 - porin activity [Evidence IEA]"
                     /calculated_mol_wt=23313
     Region          <32..195
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 malvaaslav apafgasevd rqlpkrlagp rsvsgftpsa adprlaaafa rsglassefr
       61 ftpsetrggn rpvtvavrar snrvddsnrv aavtaptvgl vpvaynlgvs vgwkrfavtg
      121 dvakvdlaga pgsreiadvg vsyslprftg rvkaaadral pgapklveda ptysldvggs
      181 ysltrnidlt agvryksere rlarfaddrr dsqavyvgta frf
//
LOCUS       WP_258042941             865 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 2 TIM barrel-domain containing protein
            [Xylanibacter ruminicola].
ACCESSION   WP_258042941
VERSION     WP_258042941.1
KEYWORDS    RefSeq.
SOURCE      Xylanibacter ruminicola
  ORGANISM  Xylanibacter ruminicola
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Prevotellaceae; Xylanibacter.
REFERENCE   1  (residues 1 to 865)
  AUTHORS   Jacobson,R.H., Zhang,X.J., DuBose,R.F. and Matthews,B.W.
  TITLE     Three-dimensional structure of beta-galactosidase from E. coli
  JOURNAL   Nature 369 (6483), 761-766 (1994)
   PUBMED   8008071
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02836.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Xylanibacter ruminicola"
                     /db_xref="taxon:839"
     Protein         1..865
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=97494
     Region          28..854
                     /region_name="GalB"
                     /note="beta-galactosidase GalB; NF041463"
                     /db_xref="CDD:469351"
ORIGIN      
        1 mkkiicllvi iglqyavpmr gfaqrmqsfd ggwrfhrgev inaeaaefdd srwrevivph
       61 dfsmepvayt hdyrgetvew kdwqvgpfsr lsigdwdsgq tvggtgwyrk aftlpmsggs
      121 ldeilknkmf rlrfdgvynq aevwvngkka amnvygympf vfdlnsilrd kanrdpmdes
      181 rvtiavkavn eglncrwysg sgifrhvwle ttdrlhldaw dtyvdasvvn gknavvkvla
      241 kifdtnatta egtikvqiid aegreiatgg seltiksphl wsidnpyryk arislldvdk
      301 svrdvleipf girtitfsad kgfllngksv klrggcvhhd ngllgsaaid raevrkvelm
      361 kaqgynavrt shnlpteafl nacdslgmlv idecfdqwee qkrkddysny fshekqtiid
      421 gkpvgmgvtn feydaalmvr rdrnhpcvim wsigneiaqr sdvprgkeia eaitraikqe
      481 dstrpttlav ndywdrtaqk mswdkdspra fdlvevggyn yeqrryesdh ekfperimyg
      541 setypnaigg nwrlvekhpy vigdfvwtai dyigeaglgh alersdrgrw iqllawpwfn
      601 awcgdidlvg nkkpqsyyrd vvwgerpiam avrpsvtdge yedalgwcwt aeenhwqwgg
      661 ylpvdirpek ydnatlkagv vhdvnghrsd slrvnvytre srvclsingr vigeqdvnpe
      721 tftasfrvay epgelkaevi kgkkagivfr tpgapaaiqf ipvnknitas hndlayvyik
      781 vvdadgnlcp taeipldikt sgarhiavag tghpydvhsf rsltpttfrg qalliiqpqe
      841 ekggvtinvs spklksqgty siemk
//
LOCUS       WP_258043132             420 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase family 39 protein [Sphingomonas sp. NBWT7].
ACCESSION   WP_258043132
VERSION     WP_258043132.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas sp. NBWT7
  ORGANISM  Sphingomonas sp. NBWT7
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024629.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13231.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Sphingomonas sp. NBWT7"
                     /db_xref="taxon:2596913"
     Protein         1..420
                     /product="glycosyltransferase family 39 protein"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=46524
     Region          6..420
                     /region_name="PMT1"
                     /note="Dolichyl-phosphate-mannose--protein O-mannosyl
                     transferase [Posttranslational modification, protein
                     turnover, chaperones]; COG1928"
                     /db_xref="CDD:441531"
ORIGIN      
        1 mwrygalpar liglpmlhrp lplallvflv aealfvirla vphqlvfdet hyvpaartll
       61 alsgpanteh pllgkwligl girlfgdtpf gwriastlag satvaatflt ewhmtgrrrp
      121 alvaaaltll gftvyvqari amldgfmlaf lmlaiaavaa tlrrggwwrw tlaaallgaa
      181 vackwlaapy vafagaafvl lkrqdarrfp glravpalai lgsvslltyf atftpaffya
      241 sepltlarll pfqhdmfvrq tqvlpahtyq srwwtwplli rpiwylyepa dgaqrgilfi
      301 gnpaimwggl mavaacwwaw vksgaarpfa aamlwtgsla vwalipktlg fyyyyypssv
      361 fivlaivaal dhwrdrtrhw dvallavaaa lalyfypila alplpgptaf rtwtwfatwv
//
LOCUS       WP_258043210              72 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein, partial [Streptomyces sp.
            B226SN101].
ACCESSION   WP_258043210
VERSION     WP_258043210.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. B226SN101
  ORGANISM  Streptomyces sp. B226SN101
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 72)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 72)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 72)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Streptomyces sp. B226SN101"
                     /db_xref="taxon:1736043"
     Protein         <1..>72
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
     Region          <6..>59
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
ORIGIN      
        1 cgeellratv ayvkqrtqfg vpvgsfqavk hrladtllgl efarpllyga avelaegpsg
       61 agaavaaakv ta
//
LOCUS       WP_258043227             304 aa            linear   BCT 02-MAR-2025
DEFINITION  NB-ARC domain-containing protein, partial [Streptomyces sp.
            B226SN101].
ACCESSION   WP_258043227
VERSION     WP_258043227.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. B226SN101
  ORGANISM  Streptomyces sp. B226SN101
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   van der Biezen,E.A. and Jones,J.D.
  TITLE     The NB-ARC domain: a novel signalling motif shared by plant
            resistance gene products and regulators of cell death in animals
  JOURNAL   Curr Biol 8 (7), R226-R227 (1998)
   PUBMED   9545207
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013124.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00931.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Streptomyces sp. B226SN101"
                     /db_xref="taxon:1736043"
     Protein         <1..304
                     /product="NB-ARC domain-containing protein"
                     /GO_function="GO:0043531 - ADP binding [Evidence IEA]"
     Region          3..>272
                     /region_name="FxSxx_TPR"
                     /note="FxSxx-COOH system tetratricopeptide repeat protein;
                     NF040586"
                     /db_xref="CDD:468560"
ORIGIN      
        1 laarltepaa ggpddhrplt vlvsgapgig ksalaqhvar lvrdafpagq llvrmtradg
       61 eprtadevaa evalalrepg egrallildd vvdadqvrpl lppvsadgpe pavvvtsrmg
      121 lggliathgg wvqrltaftd aesyalllat lgaerveaep raarrlavlc ghfpaalril
      181 tarlltrpgl rladavdwlg ddplarltlt dspdhsvtgl fdraldrldp rlseafthla
      241 qgppelladr gpedegpvpe avreqladag lledgppgpy rihdllrahv rrtarirdrr
      301 tekv
//
LOCUS       WP_258043259             528 aa            linear   BCT 02-MAR-2025
DEFINITION  serine/threonine protein kinase, partial [Streptomyces sp.
            B226SN101].
ACCESSION   WP_258043259
VERSION     WP_258043259.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. B226SN101
  ORGANISM  Streptomyces sp. B226SN101
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 528)
  AUTHORS   Scherr,N., Honnappa,S., Kunz,G., Mueller,P., Jayachandran,R.,
            Winkler,F., Pieters,J. and Steinmetz,M.O.
  TITLE     Structural basis for the specific inhibition of protein kinase G, a
            virulence factor of Mycobacterium tuberculosis
  JOURNAL   Proc Natl Acad Sci U S A 104 (29), 12151-12156 (2007)
   PUBMED   17616581
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2007 Oct 9;104(41):16388]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028229.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16919.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Streptomyces sp. B226SN101"
                     /db_xref="taxon:1736043"
     Protein         1..>528
                     /product="serine/threonine protein kinase"
     Region          <112..193
                     /region_name="PknG_rubred"
                     /note="Protein kinase G rubredoxin domain; pfam16919"
                     /db_xref="CDD:435653"
     Region          193..450
                     /region_name="STKc_PknB_like"
                     /note="Catalytic domain of bacterial Serine/Threonine
                     kinases, PknB and similar proteins; cd14014"
                     /db_xref="CDD:270916"
     Site            order(193,218..219,246,251,256..259,277)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:270916"
     Site            order(200..201,203..206,208,222,224,254,276..279,283,285,
                     329,331,333..334,345..346,349,362..365)
                     /site_type="active"
                     /db_xref="CDD:270916"
     Site            order(200..201,203..206,208,222,224,254,276..279,283,331,
                     333..334,345..346)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270916"
     Site            order(204,283,285,329,331,333,349,362..365)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270916"
     Site            order(345..353,358..365)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270916"
ORIGIN      
        1 mstqcqrpac egnyedmggg elycdtcgla pvvsptgmvs spptgiaggg rassgdsssq
       61 rsgsrasars ssrsstsrrs vsgrlsrsls gastsrsvsv rssgstsats argrlgvglv
      121 evpdvprpdp rtavmenpev perkrfcsrs dcgapvgrsr geregrtegf ctkcghpysf
      181 vpkltggdiv hgqyevvgcl ahgglgwvyl avdravsdrw vvlkglldtg dqdamaaais
      241 errflaeieh snivriynfv ehldqrtgsl dgyivmeyvg gkalkeiane rrtpagkrdp
      301 lpveqacayg iealealghl hsrnllycdf kvdnaiqted qlklidmgav rrmdddesai
      361 ygtvgyqape vaevgpsvas dlytvartla vltfdfqgyt nvfvdslpdp dnievfrtye
      421 sfyrllvrat dpdparrfas aaemaeqltg vlrevvalqt grprpalstl fgaelrvidt
      481 elfarqtddv srlggrdtgs grggllgrrk grgrpspgvp gqggtwqp
//
LOCUS       WP_258043273             195 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Streptomyces sp.
            B226SN101].
ACCESSION   WP_258043273
VERSION     WP_258043273.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. B226SN101
  ORGANISM  Streptomyces sp. B226SN101
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 195)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Streptomyces sp. B226SN101"
                     /db_xref="taxon:1736043"
     Protein         1..>195
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          31..>195
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 maepavaepi atlageaist evsfrgersg tapltwgqra iwhairrtap ndhyfnigrv
       61 lpladrgrpa tvaatldala rlverhealr trlvpaaadg gpsqwladtg slpvtiapat
      121 glpeaaaeae tlldrlsgtr fdypaewplr aalvtvgdrv thavlvlchl aadghaaevl
      181 vrdlrllvrr gsagr
//
LOCUS       WP_258043292             251 aa            linear   BCT 02-MAR-2025
DEFINITION  histidine phosphatase family protein, partial [Streptomyces sp.
            B226SN101].
ACCESSION   WP_258043292
VERSION     WP_258043292.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. B226SN101
  ORGANISM  Streptomyces sp. B226SN101
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 251)
  AUTHORS   Rigden,D.J.
  TITLE     The histidine phosphatase superfamily: structure and function
  JOURNAL   Biochem J 409 (2), 333-348 (2008)
   PUBMED   18092946
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012521.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00300.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Streptomyces sp. B226SN101"
                     /db_xref="taxon:1736043"
     Protein         <1..251
                     /product="histidine phosphatase family protein"
     Region          <6..251
                     /region_name="PRK07238"
                     /note="bifunctional RNase H/acid phosphatase; Provisional"
                     /db_xref="CDD:180903"
ORIGIN      
        1 lfplpgaavp esaapetaav peaagsgpea agapqtgwga apdlgapatl vllrhgetal
       61 tpekrfsgsg gtdpelsatg rgqaeraaeh vaalgtvqdi vssplrrcre taaavaarlg
      121 ldvrideglr etdfgawegl tftevreryg ddltawlasp dtaptggges faevtervaa
      181 ardrivarya grtvllvthv tpiktlvrla lgappeslfr melsaasist vayygdgnas
      241 vrllndtshl r
//
LOCUS       WP_258043302             522 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Streptomyces sp. B226SN101].
ACCESSION   WP_258043302
VERSION     WP_258043302.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. B226SN101
  ORGANISM  Streptomyces sp. B226SN101
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Streptomyces sp. B226SN101"
                     /db_xref="taxon:1736043"
     Protein         <1..522
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          17..414
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(24..25,28..29,32,63,113..114,116..118,121,141,
                     144..145,148,276,279..280,283..285,288,316,320,372..373,
                     377,381,397,400..401,404..405,408)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:341045"
ORIGIN      
        1 apalttprgr rpvvaalmlg malaaidgti vstavpqivg dlggftvfsw lfsgyllavt
       61 vtlplygkls dtfgrkpvli agiilflags vlcaaawnma aliafrivqg lgggalqgtv
      121 qtiaadlypl kerpriqakl stvwatsava gpvvggllag yadwrwifli nlpvgavalw
      181 lvvrhlhepa rprpaarprv dwagalavfa tgallltalv qggvawpwls apslglfgis
      241 avlaaltvvi erraaepiip gwvwrrrtia svnlalgamg llmvaptvfl ptyaqsvlgl
      301 gpiaagfvls vmtlswpvsa alsdrvynri gfrltaivgm scallillaf pllpypgapw
      361 hpallmlllg aalglfqlpl ivgvqstvgw aergtttasv lfcrqvgqsi gaavfgavan
      421 gvlaarllda pvsglpddld avartledpg glsaaatdyl rravdaavdh vyigaagaaa
      481 lallalitla prrfpvitet paaadtagad imdrhttptd qg
//
LOCUS       WP_258043297             732 aa            linear   BCT 02-MAR-2025
DEFINITION  trypsin-like serine protease [Streptomyces sp. JUS-F4].
ACCESSION   WP_258043297
VERSION     WP_258043297.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. JUS-F4
  ORGANISM  Streptomyces sp. JUS-F4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 732)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Families of serine peptidases
  JOURNAL   Methods Enzymol 244, 19-61 (1994)
   PUBMED   7845208
REFERENCE   2  (residues 1 to 732)
  AUTHORS   Sprang,S., Standing,T., Fletterick,R.J., Stroud,R.M.,
            Finer-Moore,J., Xuong,N.H., Hamlin,R., Rutter,W.J. and Craik,C.S.
  TITLE     The three-dimensional structure of Asn102 mutant of trypsin: role
            of Asp102 in serine protease catalysis
  JOURNAL   Science 237 (4817), 905-909 (1987)
   PUBMED   3112942
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012318.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00089.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Streptomyces sp. JUS-F4"
                     /db_xref="taxon:2951988"
     Protein         1..732
                     /product="trypsin-like serine protease"
                     /EC_number="3.4.21.-"
                     /GO_function="GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=72902
     Region          1..256
                     /region_name="COG5640"
                     /note="Secreted trypsin-like serine protease
                     [Posttranslational modification, protein turnover,
                     chaperones]"
                     /db_xref="CDD:444365"
     Region          259..335
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          312..362
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
ORIGIN      
        1 mprlrpraav tsgllatalv sgtflapaaq avvgtpsadn ahaftarldi gdgkractat
       61 lvdrdwllta ascfadnpae aqqllpgapk dattayvgrt dstttagqvr tvvrlvprgd
      121 rdlvlarlsk pvttitpaal attapapget ltgtgfgrta dewapvkmhq grfsvdgsda
      181 ttvnitgvdg aavcagdtgg pvfreqggsa tlvgvnsrsw qggcfgapae etrtgavgsr
      241 vddldgwlse tvtaapfvdf ngdghrdvai adpkatvgtv aeaglvrvvy gngagvsevi
      301 qggpgvnggp eagdgfgtal atvdynadgy tdlvvgvpne digkvadaga aqivygspeg
      361 lgkgrggtwf eqgsgsgall gsaseakdhm gfsiaagtta agdpyiligv pgedlgtvvd
      421 agsaiyvrgd tnvainqdke svaggpetgd qfgysvagsp nhlaigipne aigtvantgm
      481 iqilkhefna ekiptpvksi nqdtagisga aeandlfgka lsvasyrpeg aaadgdsiia
      541 vgspgegivv agvnrtnagr vvtlrvtagg avselqdiqq ekadvtggse tgdrfgeqvs
      601 vvntsprtvg tttsmllavg ipgenegtvv dsgavqtfsl lgapgltdrw ispggaaglp
      661 gvpgtnellg ssihatatdl yigmpngpga rgaahlmpws nvtggavqav tsyepgkggl
      721 pavgkafgga ir
//
LOCUS       WP_258043305             198 aa            linear   BCT 02-MAR-2025
DEFINITION  PTS transporter subunit EIIB [Paenibacillus polymyxa].
ACCESSION   WP_258043305
VERSION     WP_258043305.1
KEYWORDS    RefSeq.
SOURCE      Paenibacillus polymyxa
  ORGANISM  Paenibacillus polymyxa
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012587.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00367.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Paenibacillus polymyxa"
                     /db_xref="taxon:1406"
     Protein         1..198
                     /product="PTS transporter subunit EIIB"
                     /GO_function="GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=21308
     Region          5..>189
                     /region_name="PTS-II-ABC-beta"
                     /note="PTS system, beta-glucoside-specific IIABC
                     component; TIGR01995"
                     /db_xref="CDD:273919"
ORIGIN      
        1 mskkyeklaq divekvggse nvstlthcmt rlrfalnqnk kadqdaikal dgvidaiesg
       61 gqfqvvigth veevyeevvk yikhaenidd klsneknvsv fgklidfisg tfspivpaia
      121 gagmikalla llilfnvvsk asqtyyvinf msdaifyflp fllaysaank lkmqpctgtc
      181 vggdiasses gpiancgq
//
LOCUS       WP_258042815             216 aa            linear   BCT 02-MAR-2025
DEFINITION  SURF1 family cytochrome oxidase biogenesis protein [Sphingomonas
            sp. NBWT7].
ACCESSION   WP_258042815
VERSION     WP_258042815.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas sp. NBWT7
  ORGANISM  Sphingomonas sp. NBWT7
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 216)
  AUTHORS   Hannappel,A., Bundschuh,F.A. and Ludwig,B.
  TITLE     Role of Surf1 in heme recruitment for bacterial COX biogenesis
  JOURNAL   Biochim Biophys Acta 1817 (6), 928-937 (2012)
   PUBMED   21945856
REFERENCE   2  (residues 1 to 216)
  AUTHORS   Stettner,G.M., Viscomi,C., Zeviani,M., Wilichowski,E. and
            Dutschmann,M.
  TITLE     Hypoxic and hypercapnic challenges unveil respiratory vulnerability
            of Surf1 knockout mice, an animal model of Leigh syndrome
  JOURNAL   Mitochondrion 11 (3), 413-420 (2011)
   PUBMED   21167962
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014193.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02104.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Sphingomonas sp. NBWT7"
                     /db_xref="taxon:2596913"
     Protein         1..216
                     /product="SURF1 family cytochrome oxidase biogenesis
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=23140
     Region          31..191
                     /region_name="SURF1"
                     /note="SURF1 superfamily. Surf1/Shy1 has been implicated
                     in the posttranslational steps of the biogenesis of the
                     mitochondrially-encoded Cox1 subunit of cytochrome c
                     oxidase (complex IV). Cytochrome c oxidase (complex IV),
                     the terminal electron-transferring...; cl01321"
                     /db_xref="CDD:470159"
ORIGIN      
        1 mtgsvmdgar rggrrvpiva slivalaial mialglwqll irlpekeaql aqlaanprrp
       61 pvafplapdd sllfrrsaam crevvgigra gaggagyrli adcrsapsap ifkvqlgttr
      121 dpmrmvswpg gavsgwisha pdatplglrl irrvpqqmll vadrpigdls antrpdvglv
      181 pnnhlayagq wfffaavaav vyfvalrhrs rarrep
//
LOCUS       WP_258043325             230 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: winged helix-turn-helix transcriptional regulator
            [Streptomyces].
ACCESSION   WP_258043325
VERSION     WP_258043325.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
REFERENCE   1  (residues 1 to 230)
  AUTHORS   Yurimoto,H., Hirai,R., Matsuno,N., Yasueda,H., Kato,N. and Sakai,Y.
  TITLE     HxlR, a member of the DUF24 protein family, is a DNA-binding
            protein that acts as a positive regulator of the
            formaldehyde-inducible hxlAB operon in Bacillus subtilis
  JOURNAL   Mol Microbiol 57 (2), 511-519 (2005)
   PUBMED   15978081
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013777.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01638.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..230
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /calculated_mol_wt=24243
     Region          13..103
                     /region_name="HxlR"
                     /note="DNA-binding transcriptional regulator, HxlR family
                     [Transcription]; COG1733"
                     /db_xref="CDD:441339"
     Region          130..229
                     /region_name="SCP2"
                     /note="SCP-2 sterol transfer family; pfam02036"
                     /db_xref="CDD:460423"
ORIGIN      
        1 mprqqqpaar parrrsydqf dataraldsv gdrwtllivr ellggprryt dlhadlpgvs
       61 tdvlasrlkd meqsglalrr klpppsaasv yelterghgl rpvlaalaaw gapalaerrp
      121 tdavrahwfa lpllgaltgl tqdgilevrl degefhlhvg ggagavlpga eaygpvygyg
      181 padrpdariv ldagvcldla rgaaglaeav kdgrvevsge splaaelrga
//
LOCUS       WP_258043359             666 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: pre-toxin TG domain-containing protein [unclassified
            Streptomyces].
ACCESSION   WP_258043359
VERSION     WP_258043359.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 666)
  AUTHORS   Zhang,D., Iyer,L.M. and Aravind,L.
  TITLE     A novel immunity system for bacterial nucleic acid degrading toxins
            and its recruitment in various eukaryotic and DNA viral systems
  JOURNAL   Nucleic Acids Res 39 (11), 4532-4552 (2011)
   PUBMED   21306995
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025805.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14449.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..666
                     /product="pre-toxin TG domain-containing protein"
                     /calculated_mol_wt=71236
     Region          313..373
                     /region_name="PT-TG"
                     /note="Pre-toxin TG; pfam14449"
                     /db_xref="CDD:433960"
     Region          390..532
                     /region_name="Hint"
                     /note="Hedgehog/Intein domain, found in Hedgehog proteins
                     as well as proteins which contain inteins and undergo
                     protein splicing (e.g. DnaB, RIR1-2, GyrA and Pol). In
                     protein splicing an intervening polypeptide sequence - the
                     intein - is excised from a protein; cd00081"
                     /db_xref="CDD:238035"
     Site            order(390,464,531..532)
                     /site_type="active"
                     /note="protein-splicing catalytic site [active]"
                     /db_xref="CDD:238035"
     Site            order(390,461,464)
                     /site_type="other"
                     /note="thioester formation/cholesterol transfer"
                     /db_xref="CDD:238035"
     Region          547..665
                     /region_name="CdiA-CT_Yk_RNaseA-like"
                     /note="C-terminal (CT) domain of the contact-dependent
                     growth inhibition (CDI) system protein CdiA (CdiA-CT) of
                     Yersinia kristensenii, and similar proteins; cl39768"
                     /db_xref="CDD:454353"
     Site            order(549,552..553,577..579,613,615,632,644,646,661..662,
                     664)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:411002"
     Site            order(553,560,662,664)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:411002"
ORIGIN      
        1 mtrklitlla vltvfvslgm gestasavqg iqakaaakea aksrverlae lvqaaakysg
       61 ctdrpffekp acyrefgeka vkvgagvglf aygmheghkd tvkhfgnlek giagfaelkd
      121 ilkqdpskia dpavraqaea qvrtalngak kdidkvfadi ietigtvlvl vefvllmvnl
      181 tltlaqlvgd pgfqkaangv rtglegigkd ldrinaglat mggalddmng avdeinsglg
      241 qmnrgiaqan rgmdklnqgl adsnkavknv nkhipgikka aaklrglpgi efdfshigdt
      301 wssgtsglst aeqerrmslv ldllpgigdg kgvveaitgk dmmtgeqlsg fdralgalvv
      361 mrwvkvgkkv ldandirdar kgldavtcns fpqgtpvvma dgtrkriedi rpgdevlata
      421 pegapadspf trarpvlsrv vtasdkeftr ltidagsvts tghhlywaad lhewlradel
      481 kpgnrlldat gretavsatd sfvqeqityd ldvsgidsyy vgvgessalv hnctdlvkda
      541 grfpglahtl dehvdvdldr mkelaiektr krgrptpnsr wtdrqtaqqv vdyavagnka
      601 ridkwlrega rqplelkgtf gaknslgdvm thtgqrskag ngfvvllqra pghkpggyyv
      661 staypv
//
LOCUS       WP_258043375              73 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase, partial [Streptomyces sp.
            B226SN101].
ACCESSION   WP_258043375
VERSION     WP_258043375.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. B226SN101
  ORGANISM  Streptomyces sp. B226SN101
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 73)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Streptomyces sp. B226SN101"
                     /db_xref="taxon:1736043"
     Protein         <1..73
                     /product="PfkB family carbohydrate kinase"
     Region          <1..65
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
ORIGIN      
        1 papvrgnptg agdsavagll salaegldwp rrlaravals tatvlaptag efdaaayael
       61 lprvtvephv pap
//
LOCUS       WP_258043284             135 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6336 family protein [unclassified Streptomyces].
ACCESSION   WP_258043284
VERSION     WP_258043284.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 135)
  AUTHORS   Liu,Y., Li,M., Mu,H., Song,S., Zhang,Y., Chen,K., He,X., Wang,H.,
            Dai,Y., Lu,F., Yan,Z. and Zhang,H.
  TITLE     Identification and characterization of the ficellomycin
            biosynthesis gene cluster from Streptomyces ficellus
  JOURNAL   Appl Microbiol Biotechnol 101 (20), 7589-7602 (2017)
   PUBMED   28894917
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040066.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19862.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..135
                     /product="DUF6336 family protein"
                     /calculated_mol_wt=13847
     Region          9..134
                     /region_name="DUF6336"
                     /note="Family of unknown function (DUF6336); pfam19862"
                     /db_xref="CDD:437694"
ORIGIN      
        1 msrgadgale prlrlggvvv rgavyggiva lcvvvaafvl rehdarvdll eataflgllt
       61 gavllltglf fwasssgevl rwrdffatgg phdvvaiagp alvrtgvall vpvpfafglg
      121 elvasaaygs wlwga
//
LOCUS       WP_258043445             189 aa            linear   BCT 02-MAR-2025
DEFINITION  pyridoxal-dependent decarboxylase, partial [Escherichia coli].
ACCESSION   WP_258043445
VERSION     WP_258043445.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 189)
  AUTHORS   Viguera,E., Trelles,O., Urdiales,J.L., Mates,J.M. and
            Sanchez-Jimenez,F.
  TITLE     Mammalian L-amino acid decarboxylases producing 1,4-diamines:
            analogies among differences
  JOURNAL   Trends Biochem Sci 19 (8), 318-319 (1994)
   PUBMED   7940675
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012503.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00282.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>189
                     /product="pyridoxal-dependent decarboxylase"
                     /GO_function="GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA]"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0019752 - carboxylic acid metabolic
                     process [Evidence IEA]"
     Region          16..>185
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
ORIGIN      
        1 mdqklltdfr selldsrfga kaistiaesk rfplhemrdd vafqiindel yldgnarqnl
       61 atfcqtwdde nvhklmdlsi nknwidkeey pqsaaidlrc vnmvadlwha papkngqavg
      121 tntigsseac mlggmamkwr wrkrmeaagk ptdkpnlvcg pvqicwhkfa rywdvelrei
      181 pmrpgprat
//
LOCUS       WP_258043515             332 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: NAD-dependent epimerase/dehydratase family protein
            [Streptomyces].
ACCESSION   WP_258043515
VERSION     WP_258043515.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
REFERENCE   1  (residues 1 to 332)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..332
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=34876
     Region          1..250
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(7,9..10,12,31..33,61..63,96..98,130,134,154..157)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(75,98,130,134)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mrllmlggte fvgravtdaa largwdvtvf hrgrhapppg vraltgdrta gpaglaalte
       61 ggpdwdlvvd twsgapsavr daarllcdra ghfgyvssrs vyaypaaagl dedgppvaga
      121 spddggdvpy drakrggela vldafgdral laragliigp genigrlpww lsriarggpv
      181 iapgppgtel qyidardlae wlldaaangl hgayntvsrp ghatmgellt acvratgsda
      241 elrwtdpevl laagvepwtd lpvwlppgel ydtlhrgdht kayaaglrcr pvgetvadtw
      301 swlrtlggia prrpdrpavg ldphleakll al
//
LOCUS       WP_258043569             142 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Escherichia coli].
ACCESSION   WP_258043569
VERSION     WP_258043569.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 142)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 142)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>142
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          <3..>142
                     /region_name="VI_Rhs_Vgr"
                     /note="type VI secretion system Vgr family protein;
                     TIGR03361"
                     /db_xref="CDD:274542"
ORIGIN      
        1 qslvlcdtvr hlpesfeipw npntrtevst lcisqfrysa qirpssvvtk dytfkrpgwp
       61 grfdqegqyq dyqrtqyevy dypgrfkgah gqnfarwqmd gwrnnaevar gtsrspeiwp
      121 grrivltghp qanlnrewqv va
//
LOCUS       WP_258043574             129 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6924 domain-containing protein [unclassified
            Streptomyces].
ACCESSION   WP_258043574
VERSION     WP_258043574.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046553.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21962.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..129
                     /product="DUF6924 domain-containing protein"
                     /calculated_mol_wt=13685
ORIGIN      
        1 mhlvedrrwg gvtgeeavaa aardeelsvv fladrvtmrs plrpllaldl gadddedldp
       61 vyyqelidsp pprevrvvpa avhmvhgnlq lanvdfsefa eeaaadpdgv vrdvtassas
      121 sgslphsgp
//
LOCUS       WP_258043593             270 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GDSL-type esterase/lipase family protein
            [unclassified Streptomyces].
ACCESSION   WP_258043593
VERSION     WP_258043593.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 270)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 270)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..270
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=28902
     Region          93..234
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(102,124,214,217)
                     /site_type="active"
                     /db_xref="CDD:238141"
ORIGIN      
        1 maqvsivtsq agavighdda mrflfvgdsm tigsagdvtw ryrmwqhlea saglpyeivg
       61 prstlydaga gaplshayad psfppaarrh lsgwgegwlh mapviadavr eteadvllvs
      121 lglidlgfyt dagqtaanar afitaartan prvrmvllpv ipnvraetda pfaascahfn
      181 ellakavadl dtpsspllla srppgydirt dtydgthpgp tgehklaatf adamhqawgl
      241 ggpyrgsrfr wadrsvwrrr radpsapsll
//
LOCUS       WP_258043558             204 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF559 domain-containing protein [Streptomyces sp. B188M101].
ACCESSION   WP_258043558
VERSION     WP_258043558.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. B188M101
  ORGANISM  Streptomyces sp. B188M101
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016370.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04480.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Streptomyces sp. B188M101"
                     /db_xref="taxon:1736042"
     Protein         1..204
                     /product="DUF559 domain-containing protein"
                     /calculated_mol_wt=22807
     Region          30..124
                     /region_name="MTES_1575"
                     /note="REase_MTES_1575; pfam18741"
                     /db_xref="CDD:465853"
ORIGIN      
        1 mdnppailaa nhdigpvrpd vhaqpfqslf eqqvylrikd rgyhvlpqyp agtksidlvv
       61 vgargrlave cdgdyfhhtt rdqidrdhrr drelrrvgwr fwrlresefr fdpdealcgl
      121 wdeldrldir padysrpata psgsalwtpf dlpdepddgn tidgeaesaa ppgpdtvdgk
      181 seenenhntp daglsavdnt evla
//
LOCUS       WP_258043637             113 aa            linear   BCT 02-MAR-2025
DEFINITION  Rv3235 family protein [Mycobacterium kansasii].
ACCESSION   WP_258043637
VERSION     WP_258043637.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039460.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20060.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         1..113
                     /product="Rv3235 family protein"
                     /calculated_mol_wt=11819
     Region          17..113
                     /region_name="DUF6459"
                     /note="Family of unknown function (DUF6459); pfam20060"
                     /db_xref="CDD:466277"
ORIGIN      
        1 msapmrqaav ftdaalrrvl evidrrrpat qlrsllapnl vgavlsvsea vagqhgtavl
       61 rrvrlqpvgs sdsaaevfgs ysrgdrihai agrvervtaa ggarwvvval hig
//
LOCUS       WP_258043663             352 aa            linear   BCT 02-MAR-2025
DEFINITION  poly-gamma-glutamate hydrolase family protein [Mycobacterium
            kansasii].
ACCESSION   WP_258043663
VERSION     WP_258043663.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 352)
  AUTHORS   Mamberti,S., Prati,P., Cremaschi,P., Seppi,C., Morelli,C.F.,
            Galizzi,A., Fabbi,M. and Calvio,C.
  TITLE     gamma-PGA Hydrolases of Phage Origin in Bacillus subtilis and Other
            Microbial Genomes
  JOURNAL   PLoS One 10 (7), e0130810 (2015)
   PUBMED   26158264
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05908.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         1..352
                     /product="poly-gamma-glutamate hydrolase family protein"
                     /calculated_mol_wt=38270
     Region          7..102
                     /region_name="GGCT_like"
                     /note="GGCT-like domains, also called AIG2-like family.
                     Gamma-glutamyl cyclotransferase (GGCT) catalyzes the
                     formation of pyroglutamic acid (5-oxoproline) from
                     dipeptides containing gamma-glutamyl, and is a dimeric
                     protein. In Homo sapiens, the protein is...; cd06661"
                     /db_xref="CDD:119400"
     Site            order(7,10,12..13,75..76,82)
                     /site_type="active"
                     /note="putative active site pocket [active]"
                     /db_xref="CDD:119400"
     Site            order(50..51,53,82..86,88,99,102)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119400"
     Site            76
                     /site_type="active"
                     /note="putative catalytic residue [active]"
                     /db_xref="CDD:119400"
     Region          158..340
                     /region_name="Gamma_PGA_hydro"
                     /note="Poly-gamma-glutamate hydrolase; cl01713"
                     /db_xref="CDD:470314"
ORIGIN      
        1 mnahqpyfay gsnlcvrqma arcpdaadpr pavlsdhdwl inqrgvatve pstgsqvhgv
       61 lwqvsdrdla tldsaegvpv ryrryrrsvh tdtgptpawv yidhrvtagp prpgylprii
      121 ggavhhglpq rwidflhrwd parwpranpr atsepapqsl sallrepgvr evsrlrsrfg
      181 flaihggdle kmtdviaeha aeaadasvyl vrhpdryphh lpsarfdpae sarlaefldh
      241 vdvavslhgy grvgretqll agggnralaa hlarhlqlpg yqvvtdleai plelrglhpg
      301 npvnrirggg tqlelsarvr glsprsplpg adglspvtaa lvgglvaaar sw
//
LOCUS       WP_258043667             420 aa            linear   BCT 02-MAR-2025
DEFINITION  haloacid dehalogenase-like hydrolase [Mycobacterium kansasii].
ACCESSION   WP_258043667
VERSION     WP_258043667.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024122.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12710.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         1..420
                     /product="haloacid dehalogenase-like hydrolase"
                     /calculated_mol_wt=44876
     Region          <227..339
                     /region_name="SerB"
                     /note="Phosphoserine phosphatase [Amino acid transport and
                     metabolism]; COG0560"
                     /db_xref="CDD:440326"
ORIGIN      
        1 mrlwplrlla aaltpvltlt gcsytgrhsd aaahncriva adpgwygdnr eridalinrl
       61 gscgktgsva agaplalfdw dntmvrndig satffwminn skvrqpaggn wsttsayltt
      121 eaaaalaaac ggladpgqpl ptgtstgcad elvavytthe trsgataftg ynhrriqpgd
      181 awaaqllags tdaevtefat aarkqnldat qgseqtvgst rqtgwvryyt qmrdlvgtlq
      241 adgfdvriis asaepvvrvw atgigipadh vmgvrtdhdg dvltsrlavc ggepsipfne
      301 gkrcrvneqv fgvesaaafq qspeqrrqvf aagdsdgdvt fvtdatelrl vlnrnqielm
      361 cwayanadgk wmvnpvfinp lpvsppyrca tqgfnepdgg qaplrqadgt vlpdqqdrvh
//
LOCUS       WP_258043693             472 aa            linear   BCT 02-MAR-2025
DEFINITION  Rieske 2Fe-2S domain-containing protein [Mycobacterium kansasii].
ACCESSION   WP_258043693
VERSION     WP_258043693.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 472)
  AUTHORS   Botelho,H.M., Leal,S.S., Veith,A., Prosinecki,V., Bauer,C.,
            Frohlich,R., Kletzin,A. and Gomes,C.M.
  TITLE     Role of a novel disulfide bridge within the all-beta fold of
            soluble Rieske proteins
  JOURNAL   J Biol Inorg Chem 15 (2), 271-281 (2010)
   PUBMED   19862563
REFERENCE   2  (residues 1 to 472)
  AUTHORS   Iwata,S., Saynovits,M., Link,T.A. and Michel,H.
  TITLE     Structure of a water soluble fragment of the 'Rieske' iron-sulfur
            protein of the bovine heart mitochondrial cytochrome bc1 complex
            determined by MAD phasing at 1.5 A resolution
  JOURNAL   Structure 4 (5), 567-579 (1996)
   PUBMED   8736555
REFERENCE   3  (residues 1 to 472)
  AUTHORS   Brandt,U., Yu,L., Yu,C.A. and Trumpower,B.L.
  TITLE     The mitochondrial targeting presequence of the Rieske iron-sulfur
            protein is processed in a single step after insertion into the
            cytochrome bc1 complex in mammals and retained as a subunit in the
            complex
  JOURNAL   J Biol Chem 268 (12), 8387-8390 (1993)
   PUBMED   8386158
REFERENCE   4  (residues 1 to 472)
  AUTHORS   Huang,J.T., Struck,F., Matzinger,D.F. and Levings,C.S. 3rd.
  TITLE     Functional analysis in yeast of cDNA coding for the mitochondrial
            Rieske iron-sulfur protein of higher plants
  JOURNAL   Proc Natl Acad Sci U S A 88 (23), 10716-10720 (1991)
   PUBMED   1961737
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012575.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00355.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         1..472
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /GO_function="GO:0051537 - 2 iron, 2 sulfur cluster
                     binding [Evidence IEA]"
                     /calculated_mol_wt=53438
     Region          2..277
                     /region_name="HcaE"
                     /note="Phenylpropionate dioxygenase or related
                     ring-hydroxylating dioxygenase, large terminal subunit
                     [Inorganic ion transport and metabolism, General function
                     prediction only]; COG4638"
                     /db_xref="CDD:443676"
     Region          23..147
                     /region_name="Rieske"
                     /note="Rieske domain; a [2Fe-2S] cluster binding domain
                     commonly found in Rieske non-heme iron oxygenase (RO)
                     systems such as naphthalene and biphenyl dioxygenases, as
                     well as in plant/cyanobacterial chloroplast b6f and
                     mitochondrial cytochrome bc(1) complexes; cl00938"
                     /db_xref="CDD:445190"
     Site            order(67,69..70,87,89..90,92,94)
                     /site_type="other"
                     /note="iron-sulfur cluster [ion binding]"
                     /db_xref="CDD:239550"
     Site            order(67,69..70,87,90,92)
                     /site_type="other"
                     /note="[2Fe-2S] cluster binding site [ion binding]"
                     /db_xref="CDD:239550"
     Region          168..426
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(175,177,179,186..188,190..191,221,232,249,251,253,
                     279,281,283,285,287,307..308,310,312,318,320,322,324,
                     338..342,351..352,355..357,360)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176854"
ORIGIN      
        1 mipahiynda elfelekeri fgrawmlvah esevpqdgdy vvrrvlndsf iiardsmgev
       61 rvmfnmclhr gmqvcraeig nasnfrcpyh gwsyrndgrl iglpfhkeay ggedgfrkkg
      121 qtllpapnla synglifvsm dpdaepledf lgefkfyldf ytkqsshgle vrgpqrwrik
      181 anwkigvenf sgdmyhtpqt hasvveiglf repkaekrkd gvtywahrgg gttyklpagt
      241 feermryigy pddmikrmse vwtpeqqqlv gddgfiisaa scfpnlslvh nwpriqdgdd
      301 vvpfisirtw qpinehetev yswfavdsaa sdtykknsyk aylmcfgssg mfeqddvenw
      361 vsvtntaags marrlllnsr mglladgrpv ieplspqrfh gpgvahigyn eynqrsllsl
      421 wadhlelppv stlrtaigtr npegitspvq tncppntrps vneeeaeeat ls
//
LOCUS       WP_258043724             175 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein [Mycobacterium kansasii].
ACCESSION   WP_258043724
VERSION     WP_258043724.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 175)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         1..175
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=19121
     Region          <2..160
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mvagrghprl ddlvgifvni mllrtevtgd ldfahlldqv rmrgleafgh qdmpygvlvd
       61 rinaarstpp gpltqvllaw qnnkpaelvl gelditpvsv htktarmnfl lslteqftdt
      121 gepagisgvv eyrtalfspt vietiieqle mlltlvtahp qrrlsaitel glasr
//
LOCUS       WP_258043757             289 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Mycobacterium
            kansasii].
ACCESSION   WP_258043757
VERSION     WP_258043757.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 289)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         <1..289
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..275
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 wcelmwqraa apeaqaqrey walqvcqpdp algvrppdpt rdtwstlrvt rvvtpadvta
       61 rilaavkrhe gvrefllvai tmtiaswrra raqnpasgal valeshgrad amldtdttnt
      121 vgwftsaypv rlgagsasve vaqaerdsav arslvesvvt elraipndgl dygllryvnk
      181 vpelreaaep qiqfsylgrl dlggvtdqpw slltgpylda lpddpepelp lrfavnlsvf
      241 vattpegaql isnwrwsdal ftpsdidhlt hfwqrgiavl aaaldstav
//
LOCUS       WP_258043769             246 aa            linear   BCT 02-MAR-2025
DEFINITION  formyltransferase family protein, partial [Mycobacterium kansasii].
ACCESSION   WP_258043769
VERSION     WP_258043769.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 246)
  AUTHORS   Chen,P., Schulze-Gahmen,U., Stura,E.A., Inglese,J., Johnson,D.L.,
            Marolewski,A., Benkovic,S.J. and Wilson,I.A.
  TITLE     Crystal structure of glycinamide ribonucleotide transformylase from
            Escherichia coli at 3.0 A resolution. A target enzyme for
            chemotherapy
  JOURNAL   J Mol Biol 227 (1), 283-292 (1992)
   PUBMED   1522592
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012760.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00551.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         1..>246
                     /product="formyltransferase family protein"
                     /GO_function="GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          17..180
                     /region_name="FMT_core"
                     /note="Formyltransferase, catalytic core domain; cl00395"
                     /db_xref="CDD:444886"
     Site            order(20,22..24,85..92,97,105..108,116,135,137..138,
                     141..142)
                     /site_type="active"
                     /db_xref="CDD:187712"
     Site            order(22..23,86..87,106,108,171)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:187712"
     Site            order(85,88,90..92,97,105,137..138,141..142)
                     /site_type="other"
                     /note="cosubstrate binding site"
                     /db_xref="CDD:187712"
     Site            order(105,107,142)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:187712"
     Region          210..245
                     /region_name="N_formyltrans_C"
                     /note="N-formyltransferase dimerization C-terminal domain;
                     pfam18216"
                     /db_xref="CDD:436351"
ORIGIN      
        1 mgsmdgcsgs atkrigvfag gevgysifnr lltyapksvc alitdneapa dleipegcei
       61 riwrnqdere rtdwllsrrl diiilgwwph llkgailnaa pvilnthpsl lpycrgkdpn
      121 fwaivenvpy gvtlhhvnaa idagdiafqk eisvswsdtg atlyqkaltg mvelfeealp
      181 tivhgvipri pqtgagslhy rsqldpasvi dlearttare llnrlrartf lphpgcrftd
      241 gddvye
//
LOCUS       WP_258043843             326 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase fold domain-containing protein, partial
            [Mycobacterium kansasii].
ACCESSION   WP_258043843
VERSION     WP_258043843.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 326)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019474.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07859.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         1..>326
                     /product="alpha/beta hydrolase fold domain-containing
                     protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
     Region          110..316
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 mrpceeltar rlrahssafs ngahvevves gpsvaarmvt lasrltvrpv laavsyvphl
       61 pfpwglvdfa lrpmtrasdt lqeavslpna sghlvrapgv lpadgsrrvv lylhggaflk
      121 ggihsharla stiskfadsp vlvvnyrlvp khtlgmaldd chdayrwlrl ggydpeqivl
      181 agdsaggyla lalaqrlqih geepaalvai spllqlatrp qlahpnikad amfparafda
      241 lvalvvgaaa knkaagkaee iyeplehiep glpptlihvs gseallhdaq laaaklaavg
      301 vpaeihvwpg qlhdfqvaap mlpeat
//
LOCUS       WP_258043850             507 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Mycobacterium
            kansasii].
ACCESSION   WP_258043850
VERSION     WP_258043850.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 507)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         1..>507
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          17..431
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
     Region          471..>507
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
ORIGIN      
        1 msrqsgsdgr lepdgrtfpv tqaqlgiwlw qqtgrsavew qvgqfliidg vvdpdligqs
       61 irqviaeaep lrvafseigg rvfqtpfhyp dfeipvhdlr csqrpvqeay rlastiqqap
      121 mspagplfrf alfqtqpeef ylficvhhlv ldgftitila erissvysal aagkpvapay
      181 fgsledlvrc esnyeassey sddehywrqn ipsesgqdnw fsqenadcds ytasvpvqld
      241 pdvlarvhel srvlgirqss iitaacallv gsccidgsev vldfpvsrrt treskflpgm
      301 lsgvlplvlk assgsgaadf crhvdlqiqe alrhqrfpvh tldhktqnvr ntgrvsvnfi
      361 paanrltfng aaarafyttv ahvdyfglyf ikdddglflr tvgagrpfsd fgvadlaarl
      421 ervlvavtad pgrrlssvdv vgvdeharlv rwgnwaalaa ggvsaavsvp qlwqaqvgrt
      481 pravalvcga tstswtygqv daaanrl
//
LOCUS       WP_258043864             429 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Mycobacterium
            kansasii].
ACCESSION   WP_258043864
VERSION     WP_258043864.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 429)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         <1..>429
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..381
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation domain of nonribosomal
                     peptide synthetases (NRPSs) and similar domains; cd19540"
                     /db_xref="CDD:380463"
ORIGIN      
        1 alrtvfpetd gvpwqrivpa eavdspvsvt evadeqelaq avaqaaqyrf dlttqipirv
       61 dvlrlsatec vlvlvvhhia adgaslvpla hdlaaayttr clgqpphwsp lpvqyadytl
      121 wqheilgced dpnsqmarqv aywrdelaga pehitlasdr prparqsfrg gmvpftigak
      181 lrerlqqlah dtgttmsmml qaglavllrk lgagddvtig gpiagrtdqa ltnligffvn
      241 swvlrvdtsg nptfadvlqq vrakalaaye nqdapferlv evlnprrsta yhplfqvafa
      301 lqnnpvpave lpgieieflt vstgaakfdl finlvdlppa agkpqampas ieyaadlfnr
      361 dtierfagyy lrllhtvttd pyrrievidv ldpaecvqml trsnttaatg paglagatvp
      421 glfaeqvar
//
LOCUS       WP_258043932             177 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Escherichia coli].
ACCESSION   WP_258043932
VERSION     WP_258043932.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 177)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 177)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>177
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          <6..>177
                     /region_name="VI_Rhs_Vgr"
                     /note="type VI secretion system Vgr family protein;
                     TIGR03361"
                     /db_xref="CDD:274542"
ORIGIN      
        1 stdqslvlcd tvrylpesfe ipwnpntrte vstlcisqfr ysaqirpssv vtkdytfkrp
       61 gwagrfdqeg qyqdyqrtqy evydypgrfk gahgqnfarw qmdgwrnnae targmsrspe
      121 iwpgrrivlt ghpqanlnre wqvvaselhg eqpqavpgrq gagtalenhf avipadr
//
LOCUS       WP_258043944             155 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258043944
VERSION     WP_258043944.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 155)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..155
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Region          <1..154
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            1..31
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 llalnaaiea arageagrgf avvadevrnl ahraqesalq iqkmieelqv gareavatmt
       61 esqryslesv eianragesl gsvtrrigei dgmnqsvata teeqtavvds lnmditeint
      121 lnqegvenlq atlracgele tqagrlrqlv dsfki
//
LOCUS       WP_258043973            2205 aa            linear   BCT 02-MAR-2025
DEFINITION  FG-GAP-like repeat-containing protein [Pseudomonas aeruginosa].
ACCESSION   WP_258043973
VERSION     WP_258043973.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13517.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..2205
                     /product="FG-GAP-like repeat-containing protein"
                     /calculated_mol_wt=238082
     Region          559..642
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          729..803
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          875..1020
                     /region_name="TcdB_toxin_midN"
                     /note="Insecticide toxin TcdB middle/N-terminal region;
                     pfam12256"
                     /db_xref="CDD:403467"
     Region          <1084..2042
                     /region_name="RhsA"
                     /note="Uncharacterized conserved protein RhaS, contains 28
                     RHS repeats [General function prediction only]; COG3209"
                     /db_xref="CDD:442442"
ORIGIN      
        1 maiclmvgda taagwrsanf rvysgdyngd gqpdlylkav tsvvvvggev atpipllppl
       61 knvvllrnga sysalydppa adlnavawta apyqsfigdl nrdgildlil qpndssdsll
      121 ivsgnpsaqg vlqvasgtgl gteigydaga rfalgdwlgn ggtsirvshp tqgqstlfin
      181 aggqlvaryl svptplpgvv lgkaaeafta lnllapqagv rgdggldyry plelppgiag
      241 lqpelalvqg ggggvlgegw slaglssier cpasiaqdgq nrqvgllesd rlcldgmrlq
      301 llsgeyfkpg svyrteidsf srvqatgsaa slgfevrtrd griltyggaa aikaqgaavp
      361 yqwgissatd rfgnaieyry laanslvpse ilyagnrvsf eyagalrsvp ryfaggytss
      421 thvltaiavr gpaaqqlfrt elayertqgd askvrlkqvq rcawgsagke clspvafdyl
      481 agvygytgta esagldkfdy vlisqasfvt adlngdgrha lvnatmgklk avtydggslv
      541 erllydadnt plfsltrmdf ngdgkdeilf lrmrkdpnsa nadmqwmlyt angvvalgdt
      601 wtappagpng ivyslaggst gfatyaplva dldqngsldl flpingswva ylnrsgaips
      661 farsallsgf ktidygwfsy wgsdpgggvr lasgkagkls agiwrsgsgm apaamvdlgi
      721 elaraltadv ngdgqmdylv pnasgkvdll lntggplsag lfqrlgtsls aaqllpeyrf
      781 raslqdyaak avdydgdgre eilyprasgt fgllrftgng feeldsgvpl srrlatsttq
      841 ldkscqdala vwkrimgtap daagresasw lyyqtaancg fspegllvdp yemfvadvng
      901 dgfqdvlvgg slvveplrrs irwraflhnr rspellsrid agsgnslgie yarlndpavh
      961 tpqvsafpqv slniprpvvs rlrvadgigg trdyqylyqg arldllgrgf lgfrqmevrd
     1021 largrtqvrm lrqdfpfvgr ldkeetslag kllarqqnqw rsaatiagks ffvypaqfne
     1081 erfdqgapvs atrrkvvmde sygnptqvte eiaasltggt lhsrvverqy sndgaswlvg
     1141 fvtretests gdsdsksrvq lrsaqpgtla pasetsfsgs pgaeitrqys ydgngrivri
     1201 ttsgaglaar seqfgayqgp wpgtrsnalg hverfayeaa rgqptskvda nglaesylyd
     1261 afgretlrrf adgsllatdy lvcgsraica sgakvavrtr tvrgsqqgaa erwqyldgfg
     1321 rvlrdrrqaf dgrwinvdns ydalgrqrst tepyieaatv lqttwdaqdr plarqlpsga
     1381 qlsysygara aggswkqysl gydgrslter reydargklv lstnalgsag evsvryryda
     1441 dgnlawtqva gdsrseirms ydaagrrtgl fdpnsgqesv qydalgqalv rtasdgsrte
     1501 rkydllgrvl eqtdrlggqa sisrwqydtg tkslgklvgv agpgyrqall yddlarlkar
     1561 gwdievdgvt rsyqesygyd gfsrlasttl angqvlrhly ngygfaageq dgagttlrqi
     1621 qardardqiv resygngvls qrdyqpatgw ltriqaskgg svlqslsyry dglgnllers
     1681 dargysevls yddlnrllrs artldgtqvv qdftydalgn ltgksgvgay rygsyssaeq
     1741 qlcagrggva qpgphavrgt sagtycydar gnqlsgpgrq vkyasfdkpv eisagsslsr
     1801 fsydperkry lqtvegrtsv yldegrfeev ndggrswqda yvgdylilrk eggavkklyl
     1861 lrdalgsvei lldangavse rqsfaafgeh rgadwkdngn qptatstrrg ftghehlees
     1921 glvhmngrvy dpvigrflsa divyqdtana qaynrysygw nnpfasvdpt gyaledistg
     1981 gywyspiidd swlllgnawk lnlpesgfdf glgtfkgfms aaqatswlnp lvggfqhyan
     2041 ntlsrkisgv gyddllayks ldqragaglf digslifssg fsavksfnla grvtkvveve
     2101 svylyravgp eefysimdsg kfslryegne mkqfgmnlne vltyantnfd ysavvkavvd
     2161 ksalkgfevt hgqidsfifk sgvvtvkegg mellnrsvrs ihhef
//
LOCUS       WP_258042672             179 aa            linear   BCT 02-MAR-2025
DEFINITION  S6 family peptidase, partial [Escherichia coli].
ACCESSION   WP_258042672
VERSION     WP_258042672.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 179)
  AUTHORS   Maldonado-Contreras,A., Birtley,J.R., Boll,E., Zhao,Y., Mumy,K.L.,
            Toscano,J., Ayehunie,S., Reinecker,H.C., Stern,L.J. and
            McCormick,B.A.
  TITLE     Shigella depends on SepA to destabilize the intestinal epithelial
            integrity via cofilin activation
  JOURNAL   Gut Microbes 8 (6), 544-560 (2017)
   PUBMED   28598765
REFERENCE   2  (residues 1 to 179)
  AUTHORS   Johnson,T.A., Qiu,J., Plaut,A.G. and Holyoak,T.
  TITLE     Active-site gating regulates substrate selectivity in a
            chymotrypsin-like serine protease the structure of haemophilus
            influenzae immunoglobulin A1 protease
  JOURNAL   J Mol Biol 389 (3), 559-574 (2009)
   PUBMED   19393662
REFERENCE   3  (residues 1 to 179)
  AUTHORS   Henderson,I.R., Czeczulin,J., Eslava,C., Noriega,F. and Nataro,J.P.
  TITLE     Characterization of pic, a secreted protease of Shigella flexneri
            and enteroaggregative Escherichia coli
  JOURNAL   Infect Immun 67 (11), 5587-5596 (1999)
   PUBMED   10531204
REFERENCE   4  (residues 1 to 179)
  AUTHORS   Benjelloun-Touimi,Z., Si Tahar,M., Montecucco,C., Sansonetti,P.J.
            and Parsot,C.
  TITLE     SepA, the 110 kDa protein secreted by Shigella flexneri: two-domain
            structure and proteolytic activity
  JOURNAL   Microbiology (Reading) 144 (Pt 7), 1815-1822 (1998)
   PUBMED   9695914
REFERENCE   5  (residues 1 to 179)
  AUTHORS   Stein,M., Kenny,B., Stein,M.A. and Finlay,B.B.
  TITLE     Characterization of EspC, a 110-kilodalton protein secreted by
            enteropathogenic Escherichia coli which is homologous to members of
            the immunoglobulin A protease-like family of secreted proteins
  JOURNAL   J Bacteriol 178 (22), 6546-6554 (1996)
   PUBMED   8932311
REFERENCE   6  (residues 1 to 179)
  AUTHORS   Bachovchin,W.W., Plaut,A.G., Flentke,G.R., Lynch,M. and
            Kettner,C.A.
  TITLE     Inhibition of IgA1 proteinases from Neisseria gonorrhoeae and
            Hemophilus influenzae by peptide prolyl boronic acids
  JOURNAL   J Biol Chem 265 (7), 3738-3743 (1990)
   PUBMED   2105953
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014452.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02395.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>179
                     /product="S6 family peptidase"
                     /GO_function="GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          1..48
                     /region_name="ESPR"
                     /note="Extended Signal Peptide of Type V secretion system;
                     pfam13018"
                     /db_xref="CDD:463773"
     Region          68..>168
                     /region_name="Peptidase_S6"
                     /note="Immunoglobulin A1 protease; pfam02395"
                     /db_xref="CDD:396804"
ORIGIN      
        1 mnkiyslkys hitggliavs elsgrvssrt tgkkkhkril alcflgllps sysfasqmdi
       61 snfyirdymd faqnkgifqa gatnieivkk dgstlklpev pfpdfspvan kgsttsigga
      121 ysitathntk dhhsvatqnw gnstykqtdw ntshpdfavs rldkfvvetr gategadis
//
LOCUS       WP_258043986             162 aa            linear   BCT 02-MAR-2025
DEFINITION  methylmalonyl-CoA mutase family protein, partial [Escherichia
            coli].
ACCESSION   WP_258043986
VERSION     WP_258043986.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 162)
  AUTHORS   Mancia,F., Keep,N.H., Nakagawa,A., Leadlay,P.F., McSweeney,S.,
            Rasmussen,B., Bosecke,P., Diat,O. and Evans,P.R.
  TITLE     How coenzyme B12 radicals are generated: the crystal structure of
            methylmalonyl-coenzyme A mutase at 2 A resolution
  JOURNAL   Structure 4 (3), 339-350 (1996)
   PUBMED   8805541
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013781.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01642.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>162
                     /product="methylmalonyl-CoA mutase family protein"
                     /GO_function="GO:0016866 - intramolecular transferase
                     activity [Evidence IEA]"
                     /GO_function="GO:0031419 - cobalamin binding [Evidence
                     IEA]"
     Region          1..>162
                     /region_name="PRK09426"
                     /note="methylmalonyl-CoA mutase; Reviewed"
                     /db_xref="CDD:236508"
ORIGIN      
        1 msneqewqql ankelsrrek tvdslvqqta egiaikplyt eadldnlevt gtlpglppyv
       61 rgpratmyta qpwtirqyag fstakesnaf yrrnlaagqk glsvafdlat hrgydsdnpr
      121 vagdvgkagv aidtvedmkv lfdqipldkm svsmtmngav lp
//
LOCUS       WP_258044002             442 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_258044002
VERSION     WP_258044002.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 442)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>442
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..>437
                     /region_name="entF"
                     /note="enterobactin non-ribosomal peptide synthetase EntF;
                     PRK10252"
                     /db_xref="CDD:236668"
ORIGIN      
        1 msqhlplvaa qpgiwmaekl sdlpsawsva hyveltgdvd apllaravvv glaqadtlrm
       61 rftedngevw qwvddalife lpeiidlrtn idphgtaqvl mladlqqdlr vdsgkplvfh
      121 qlihvadnrw ywyqryhhll vdgfsfpait rqianiyctw lrgeptpasp ftpfadvvee
      181 yqqyreseaw qrdaafwaeq rrqlpppasl spaplagrsa sadilrlkle ftdgefrqla
      241 tqlsgvqrtd lalalaalwl grlcnrmdya agfifmrrls saaltasgpv lnvlplgihi
      301 aaqetlpela trlaaqlkkm rrhqrydaeq ivrdsgraag eeplfgpvln ikvfdyqldi
      361 pgvqtqthtl atgpvndlel alfpdehgdl sieilankqr ydeptliqpa errkiliapf
      421 tadpaplcgd vaillpgvsa hl
//
LOCUS       WP_258044011            1234 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258044011
VERSION     WP_258044011.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..1234
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..1234
                     /product="Ig-like domain-containing protein"
     Region          <6..438
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          <397..>751
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          732..>1217
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
ORIGIN      
        1 atastvvapp apvidpsngt tisgtaeaga kviltdgngn pigettadgs gnwtftpatp
       61 langtvvnav aqdpagntgp qgsttvdava pntpvvnpsn gnllngtaep gstvtltdgn
      121 gnpigqttad gsgnwsftpg sqlpngtvvn vtasdaagnt sapatttvds slpsipqvdp
      181 sngsvisgta dagntiiitd gngnpigqvt adgsgnwsft pgiplpdgtv vnvvarspsn
      241 vdsapavitv dgvapaapvi dpsngteisg taeagatvil tdgggnpigq atadgsgnws
      301 ftpgtplang tvinavaqdp agntsgptst tvdavapatp vvnpsngsvi agtaeagatv
      361 iltdgggnpi gqatadgsgn wsftpgtpla ngsvvnavaq daagntsgpa sttvdsvapa
      421 tpvldpsngt visgtaeaga tviltdgggn pigqatadgs gnwsftpgtp langsvinav
      481 aqdaagntsg pvsttvdava patpvidpsn gvelsgtaep gvrviltdgn gnpigqtlad
      541 gsgnwsftpg tplangtvvn avaqdpagnt sgpasttvdt vapatpvina sngsvitgta
      601 evgakviltd gngnpigett adgsgnwtft pgtplangtv inavaedaag nasgpasttv
      661 dsvapsapll sisadgallt gtaepnsqvr ivvngdtanp itvtvdgagn fslpfappli
      721 tgeliagvav daagnvsgpa tinapdlapp tisvpeaadt winaaeigdg iqvdvtirpt
      781 mqvgqvvtvk fagqngyetq vshiltagdi aagnltltlt psggmgpfpe gastvtadin
      841 ggtastpvpf tidtippatp vlslvgnilt isaepgtelt vtvdvggvta tatvtadnsg
      901 laslnlltdl didfswdqll naqvsvvgrd pagnpsntas igigtsieqp vtignfgldv
      961 slnplnprfg fsgttepnss vvirvitpal nvellpiqad ssgnfslnll sptiltqlgl
     1021 nitdilnlgs qisfnlvstd sngndsaayg itltpnglsl nigqidvngt sgddvlsgan
     1081 gssehinggd gsdlifnvgt gdhvaagngn dtiqitatdf vsidggagfd tlvlangidl
     1141 dynavgvgtl snleridlgk gdsgsvltlt aaevdaitda nntlqitgen ndtlnvvgav
     1201 ntgttqling itydvytfgs ttlliedntv qvvv
//
LOCUS       WP_258044014             190 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_258044014
VERSION     WP_258044014.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>190
                     /product="DUF6531 domain-containing protein"
     Region          6..>190
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
ORIGIN      
        1 kkdspnygnp vnpvlgakvl pgetdialpg plpfilsray ssyrtrtpap vgvfgpgwka
       61 pfdirlqird eglilndsgg rsihfeplfp gevsysrses lwlarggvaa qhssqplsal
      121 wqvlpedvrl sphvylatns lqgpwwilsw pervpgadev lppeppayrv ltgvvdgfgr
      181 tlafhraaeg
//
LOCUS       WP_258044012             209 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase gpA endonuclease subunit, partial [Escherichia coli].
ACCESSION   WP_258044012
VERSION     WP_258044012.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 209)
  AUTHORS   Ortiz,D., delToro,D., Ordyan,M., Pajak,J., Sippy,J., Catala,A.,
            Oh,C.S., Vu,A., Arya,G., Feiss,M., Smith,D.E. and Catalano,C.E.
  TITLE     Evidence that a catalytic glutamate and an 'Arginine Toggle' act in
            concert to mediate ATP hydrolysis and mechanochemical coupling in a
            viral DNA packaging motor
  JOURNAL   Nucleic Acids Res 47 (3), 1404-1415 (2019)
   PUBMED   30541105
REFERENCE   2  (residues 1 to 209)
  AUTHORS   delToro,D., Ortiz,D., Ordyan,M., Sippy,J., Oh,C.S., Keller,N.,
            Feiss,M., Catalano,C.E. and Smith,D.E.
  TITLE     Walker-A Motif Acts to Coordinate ATP Hydrolysis with Motor Output
            in Viral DNA Packaging
  JOURNAL   J Mol Biol 428 (13), 2709-2729 (2016)
   PUBMED   27139643
REFERENCE   3  (residues 1 to 209)
  AUTHORS   Andrews,B.T. and Catalano,C.E.
  TITLE     The enzymology of a viral genome packaging motor is influenced by
            the assembly state of the motor subunits
  JOURNAL   Biochemistry 51 (46), 9342-9353 (2012)
   PUBMED   23134123
REFERENCE   4  (residues 1 to 209)
  AUTHORS   Ortega,M.E., Gaussier,H. and Catalano,C.E.
  TITLE     The DNA maturation domain of gpA, the DNA packaging motor protein
            of bacteriophage lambda, contains an ATPase site associated with
            endonuclease activity
  JOURNAL   J Mol Biol 373 (4), 851-865 (2007)
   PUBMED   17870092
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042573.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20454.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..209
                     /product="terminase gpA endonuclease subunit"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
     Region          <10..174
                     /region_name="gpA1"
                     /note="Phage terminase, large subunit GpA [Mobilome:
                     prophages, transposons]; COG5525"
                     /db_xref="CDD:444276"
ORIGIN      
        1 nrrrtkmred eainktytrr ngaemsvsri cwdiggidpt ivyerskkhg lfrvipikga
       61 svygkpvasm prkrnkngvy lteigtdtak eqiynrftlt pegdeplpga vhfpnnpdif
      121 dlteaqqlta eeqvekwvdg rkkilwdskk rrnealdcfv yalaalrisi srwqldlsal
      181 laslqeedga atnkktlady aralsgede
//
LOCUS       WP_258044028              82 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6160 family protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258044028
VERSION     WP_258044028.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039674.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19657.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>82
                     /product="DUF6160 family protein"
ORIGIN      
        1 altdadlsav ngqdgisiqt tfneinidna ywddhagtpt sadqilraqa sgvkiqksna
       61 stqalgtnyr ldvgsnattg ka
//
LOCUS       WP_258044029              77 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258044029
VERSION     WP_258044029.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>77
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <1..>59
                     /region_name="ABC_6TM_exporters"
                     /note="Six-transmembrane helical domain of the ATP-binding
                     cassette transporters; cl38913"
                     /db_xref="CDD:365789"
     Region          23..59
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:349983"
ORIGIN      
        1 fvadirkrvf dhlielhpgf yetnrsseiq srltadttll qtvigsslsm alrnalmlvs
       61 lalvtnisst pptsira
//
LOCUS       WP_258044026             104 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase family protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258044026
VERSION     WP_258044026.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 104)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00725.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>104
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
     Region          <1..104
                     /region_name="PRK08268"
                     /note="3-hydroxy-acyl-CoA dehydrogenase; Validated"
                     /db_xref="CDD:236211"
ORIGIN      
        1 dvlsdlerhr clmacpatra elqqaartlf ardgvgvtli rdsagfivqr tlasivnlac
       61 diaqqgiasv ehidlavrlg lgyplgplew gdrlgagrvl rile
//
LOCUS       WP_258044022              81 aa            linear   BCT 02-MAR-2025
DEFINITION  cysteine peptidase family C39 domain-containing protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258044022
VERSION     WP_258044022.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 81)
  AUTHORS   Havarstein,L.S., Diep,D.B. and Nes,I.F.
  TITLE     A family of bacteriocin ABC transporters carry out proteolytic
            processing of their substrates concomitant with export
  JOURNAL   Mol Microbiol 16 (2), 229-240 (1995)
   PUBMED   7565085
REFERENCE   2  (residues 1 to 81)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015377.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03412.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>81
                     /product="cysteine peptidase family C39 domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          15..>81
                     /region_name="Peptidase_C39_like"
                     /note="Peptidase family C39 mostly contains
                     bacteriocin-processing endopeptidases from bacteria. The
                     cysteine peptidases in family C39 cleave the
                     'double-glycine' leader peptides from the precursors of
                     various bacteriocins (mostly non-lantibiotic). The
                     cleavage...; cl00296"
                     /db_xref="CDD:469710"
ORIGIN      
        1 mafldalalr lgrrlplvlq teatecglac lamiagyhgh htglmelrrr fsvslkgisl
       61 kqliqtahrl glgthavkld l
//
LOCUS       WP_258044030              51 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2790 domain-containing protein [Pseudomonas aeruginosa].
ACCESSION   WP_258044030
VERSION     WP_258044030.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022429.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10976.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..51
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..51
                     /product="DUF2790 domain-containing protein"
                     /calculated_mol_wt=5413
     Region          <1..47
                     /region_name="DUF2790"
                     /note="Protein of unknown function (DUF2790); cl12550"
                     /db_xref="CDD:472325"
ORIGIN      
        1 mpldvhkvva tqeqasttce ivdarmdyld sagklhslay rkyasacnqg g
//
LOCUS       WP_258044075              78 aa            linear   BCT 02-MAR-2025
DEFINITION  Mur ligase domain-containing protein, partial [Mycobacterium
            kansasii].
ACCESSION   WP_258044075
VERSION     WP_258044075.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 78)
  AUTHORS   Bertrand,J.A., Auger,G., Fanchon,E., Martin,L., Blanot,D., van
            Heijenoort,J. and Dideberg,O.
  TITLE     Crystal structure of UDP-N-acetylmuramoyl-L-alanine:D-glutamate
            ligase from Escherichia coli
  JOURNAL   EMBO J 16 (12), 3416-3425 (1997)
   PUBMED   9218784
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013396.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01225.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         1..>78
                     /product="Mur ligase domain-containing protein"
                     /GO_function="GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          2..>60
                     /region_name="MurF"
                     /note="UDP-N-acetylmuramyl pentapeptide synthase [Cell
                     wall/membrane/envelope biogenesis]; COG0770"
                     /db_xref="CDD:440533"
ORIGIN      
        1 midltvaqia divggtladi spqdaaqrrv tgtvefdsra igpgglflal pgahvdghdy
       61 aasaaaagav avlaarpv
//
LOCUS       WP_258044104             165 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Mycobacterium
            kansasii].
ACCESSION   WP_258044104
VERSION     WP_258044104.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 165)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         1..>165
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          1..>160
                     /region_name="PRK07586"
                     /note="acetolactate synthase large subunit"
                     /db_xref="CDD:236063"
ORIGIN      
        1 mngaealint lvdggvdvcf anpgtsemhf vaaldtvpqm rgiltlfegv atgaadgyar
       61 iadrpaavll hlgpglgngl anlhnarrar vpmvvivgdh atyhkkydap lesdidalag
      121 tvsgwvrrtq aaagvgidta davaatrlgp qistlilpad qqhhg
//
LOCUS       WP_258044147             217 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Streptomyces sp. SM11].
ACCESSION   WP_258044147
VERSION     WP_258044147.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM11
  ORGANISM  Streptomyces sp. SM11
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 217)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Streptomyces sp. SM11"
                     /db_xref="taxon:565557"
     Protein         1..217
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=23148
     Region          1..199
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mragfralld aeedievvge aadgragldl vrehtpdval lditmpvmtg ieatreiaad
       61 pllasvrvvi ltnygldayv fealragaag fllkdtepae llratrvavd gdallspait
      121 rrligefvar ppdrstapgm ealtrrerev talaarglsn deiavhmvvs pftakthvsr
      181 amiklgardr aqlvvfayes glveprsrtg egrapgh
//
LOCUS       WP_258044193             127 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA repair ATPase [Streptomyces sp. SM11].
ACCESSION   WP_258044193
VERSION     WP_258044193.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM11
  ORGANISM  Streptomyces sp. SM11
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023874.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12458.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Streptomyces sp. SM11"
                     /db_xref="taxon:565557"
     Protein         1..127
                     /product="DNA repair ATPase"
                     /calculated_mol_wt=13865
     Region          8..>126
                     /region_name="DUF3686"
                     /note="ATPase involved in DNA repair; pfam12458"
                     /db_xref="CDD:432568"
ORIGIN      
        1 mrphrrrggr llfgrtrpaa qdteprvaev lalcdrdlvp lpadavpglv dapalvreft
       61 alhryfrgar lialrrtear llavfrtges addlrvlrwa tgpsgtcrfl dalgegdlvt
      121 ppgqdvd
//
LOCUS       WP_258044215             391 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Streptomyces sp. SM11].
ACCESSION   WP_258044215
VERSION     WP_258044215.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM11
  ORGANISM  Streptomyces sp. SM11
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Streptomyces sp. SM11"
                     /db_xref="taxon:565557"
     Protein         1..391
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=39991
     Region          1..>198
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Region          31..391
                     /region_name="efflux_EmrB"
                     /note="drug resistance transporter, EmrB/QacA subfamily;
                     TIGR00711"
                     /db_xref="CDD:129794"
ORIGIN      
        1 mfltgfaala vvptlptaae dldgvplfpm vagsfvaasl lggvlgghwa drsgarrpld
       61 lgmilsvvtl lvsassvsiw qlvagrfvdg laagmvavsv ttaigqsype ylrprmlamm
      121 saswiipslv gppiagvvte vwswravfyg lavltalpai alvavlrrap agggdqaaap
      181 pddlppaeer asrpplviaa llslgaalgq ygvsgwdarh llfvvgglvl lvafaprllp
      241 qgtwrsargl ptavllrgla sgtyftveal vplmliaerr vaavtvgvaf tasavlwaga
      301 swvqgkllqd varhrlvtvg alimeasvaf avvgsfsgvs pllamaampl aavgmgmlap
      361 cvtvlslshs apdrlghtts amqtnltssp s
//
LOCUS       WP_258044310             143 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5681 domain-containing protein [Sphingomonas citricola].
ACCESSION   WP_258044310
VERSION     WP_258044310.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas citricola
  ORGANISM  Sphingomonas citricola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039194.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18932.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Sphingomonas citricola"
                     /db_xref="taxon:2862498"
     Protein         1..143
                     /product="DUF5681 domain-containing protein"
                     /calculated_mol_wt=14982
     Region          15..75
                     /region_name="DUF5681"
                     /note="Family of unknown function (DUF5681); pfam18932"
                     /db_xref="CDD:465917"
ORIGIN      
        1 mttsrkepak tgadtrfkpg npgkpkgtrs ratmaaeall qgevealtrt aiekalegdg
       61 malrlclerl vpprkdtpin ielptitnaa dvvgasaavl aavgagdvtp deagrvmtll
      121 tahksiiemg elerriaale erk
//
LOCUS       WP_258044325             354 aa            linear   BCT 02-MAR-2025
DEFINITION  homocysteine S-methyltransferase family protein [Sphingomonas
            citricola].
ACCESSION   WP_258044325
VERSION     WP_258044325.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas citricola
  ORGANISM  Sphingomonas citricola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 354)
  AUTHORS   Thanbichler,M., Neuhierl,B. and Bock,A.
  TITLE     S-methylmethionine metabolism in Escherichia coli
  JOURNAL   J Bacteriol 181 (2), 662-665 (1999)
   PUBMED   9882684
REFERENCE   2  (residues 1 to 354)
  AUTHORS   Chen,L.H., Liu,M.L., Hwang,H.Y., Chen,L.S., Korenberg,J. and
            Shane,B.
  TITLE     Human methionine synthase. cDNA cloning, gene localization, and
            expression
  JOURNAL   J Biol Chem 272 (6), 3628-3634 (1997)
   PUBMED   9013615
REFERENCE   3  (residues 1 to 354)
  AUTHORS   Garrow,T.A.
  TITLE     Purification, kinetic properties, and cDNA cloning of mammalian
            betaine-homocysteine methyltransferase
  JOURNAL   J Biol Chem 271 (37), 22831-22838 (1996)
   PUBMED   8798461
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014615.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02574.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Sphingomonas citricola"
                     /db_xref="taxon:2862498"
     Protein         1..354
                     /product="homocysteine S-methyltransferase family protein"
                     /calculated_mol_wt=37449
     Region          8..>350
                     /region_name="metH"
                     /note="B12-dependent methionine synthase; Provisional;
                     cl46890"
                     /db_xref="CDD:481230"
ORIGIN      
        1 msgfgdvsvr eifnaeaakr ilitdgafgt eiqnwklsea dyagtlalgh dqkgnndila
       61 ltkpevpaai hrayfeagad iaetntfsan risqadygae glvreinves arlarsiade
      121 ftakdgrprf vagavgptnk tlslspdvnd pgyreidfdy lkdvyreqid alveggadfv
      181 lietvfdtln akagvmaaie agaalgrdlp imlsmtltdl sgrnlsghtv eafwhavrha
      241 rpltiglncs fgaeqlrphv ktlseicdtl imvypnaglp nelgaydeap attaglvgqw
      301 aeagqvnvlg gccgstpahi aaiaegvrgl apravpvppv rtrlaglepf fmaa
//
LOCUS       WP_258044428             425 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Sphingomonas citricola].
ACCESSION   WP_258044428
VERSION     WP_258044428.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas citricola
  ORGANISM  Sphingomonas citricola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Sphingomonas citricola"
                     /db_xref="taxon:2862498"
     Protein         1..425
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45471
     Region          21..396
                     /region_name="2A0114"
                     /note="D-galactonate transporter; TIGR00893"
                     /db_xref="CDD:273326"
ORIGIN      
        1 mrvrnlrwwi valicagtma nylarnslgv lapelksalh mttqqysyvv gafqlaytim
       61 qpiagalvdr fglrigfamf glawsaanml halafgwisl alfrgllgif eaaaipsgik
      121 avaewfpare rsvavgwfna gtslgaliap pvvaavaiwa nwrwafivtg avgviwaiaw
      181 yacyrppehh naitaderdm iaadrpatpa ararpreilr sqrfwviavp rflaepawqt
      241 fsfwiplyla tergmdlkqi alfawlpfla adfggilggy lspflmrrgv alipsrvagi
      301 algavlmiap gciglaaspy taillfsigg fahqmisgli ntlsadvfap gevgtangfi
      361 gqagwiggli fslligqfad tvgygplfgv lavldligaa ifiifigklt aptpakpnps
      421 kelpa
//
LOCUS       WP_258044461             870 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6504 family protein [Sphingomonas citricola].
ACCESSION   WP_258044461
VERSION     WP_258044461.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas citricola
  ORGANISM  Sphingomonas citricola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039800.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20114.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Sphingomonas citricola"
                     /db_xref="taxon:2862498"
     Protein         1..870
                     /product="DUF6504 family protein"
                     /calculated_mol_wt=92896
     Region          <151..>388
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     Region          354..683
                     /region_name="PolY_like"
                     /note="DNA Polymerase Y-family; cd03468"
                     /db_xref="CDD:176458"
     Site            order(449,452,527..533,562,586..591,622,648..652,654)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176458"
ORIGIN      
        1 mkrvaslylp nwsidrvrra erqhtppper giaagaelaa lkrasdaeqg gkqcdaprns
       61 gwrpgarwar seasaadtrp fdrplagkde ragganacwa getradverr iarmeahqrp
      121 pmremgrrse aaehafkrlp gddgnkasgw pepgaapgmv avrfggegvr ptsaqrrrdp
      181 vavaepaspr atphdgrtda rtrdpagast agsrhplaac dappiadatp adtmaqppar
      241 pllrlvdada aarpattgtv tpadtsreht lraatalrpa isairypgeg phpdnpggdq
      301 psagerrvta grvgsndaga svlpvtpffd tgrstagtla rvcpadgias aadpanaspl
      361 dhphaaplvt vhkigsriev aaacpaarrl gidpgmaltq vraatpdvrv rdadpagdra
      421 aldvlavala rrwspcvsvs dappaaigge aglfidltgv ahlhggeqvm arrivrllar
      481 lgiaarvgia dtpaaawala qfapgpvsal ppahgiapfa dypvtalrle agavelmrrl
      541 gidqigalaa mprapmarrf ghgvatrldq ligavaepva pviprdpvvv eqrfaepilt
      601 aepiaywiaq lsdrlaqala qqgrgaralv laltrvdgav qavrvgfara trdaphmlrl
      661 lvrrielidp gfgieimalh vtrdeplgae tlagdledav pdlaalvdai vnrigearlw
      721 rtravesdvp ersvaaaapl dratnsnarl vrddvrhldt rgaahpwhpr wprparllrr
      781 pepidhvmae lpdsypkrfr wrgqmhqvvr gdgperiage wwrrvaerqa vrdyfqvedd
      841 agqrfwlfrr gdgqrpetgd mtwhlhgtfg
//
LOCUS       WP_258044480             373 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Streptomyces sp. SM11].
ACCESSION   WP_258044480
VERSION     WP_258044480.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM11
  ORGANISM  Streptomyces sp. SM11
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 373)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 373)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 373)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 373)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Streptomyces sp. SM11"
                     /db_xref="taxon:565557"
     Protein         1..>373
                     /product="ATP-binding protein"
     Region          1..>373
                     /region_name="GyrB"
                     /note="DNA gyrase/topoisomerase IV, subunit B
                     [Replication, recombination and repair]; COG0187"
                     /db_xref="CDD:439957"
ORIGIN      
        1 mttaydaeai tvysgleavr rnpsmyvgst gpdgahhlvl elvdnavdea aaghcgaisv
       61 elhddgscsv tddgrgiptd phpeagvpac elvlttlhsg gkfdhssyat saglhgvgla
      121 cvnalsqwlr ldvwrdgahh sesfargsve tplkrggdsd rrgtrvwfrp dpeifsscvl
      181 daellharll diaylhpglr velidhrtgr neslcemtgv rglltyrard aekvhaeptt
      241 iswagdgcvi daavqwtegy aeqifayvnt irtdlggshv dalraalagv vaerlgpaad
      301 kmtavdileg ltaviairip darfdgqtkr tlrndeagar vfdvvteqar ralaadpela
      361 rriaeravda sra
//
LOCUS       WP_258044248              82 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6332 family protein [Streptomyces sp. SM11].
ACCESSION   WP_258044248
VERSION     WP_258044248.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM11
  ORGANISM  Streptomyces sp. SM11
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 82)
  AUTHORS   Greule,A., Marolt,M., Deubel,D., Peintner,I., Zhang,S.,
            Jessen-Trefzer,C., De Ford,C., Burschel,S., Li,S.M., Friedrich,T.,
            Merfort,I., Ludeke,S., Bisel,P., Muller,M., Paululat,T. and
            Bechthold,A.
  TITLE     Wide Distribution of Foxicin Biosynthetic Gene Clusters in
            Streptomyces Strains - An Unusual Secondary Metabolite with Various
            Properties
  JOURNAL   Front Microbiol 8, 221 (2017)
   PUBMED   28270798
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040064.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19857.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Streptomyces sp. SM11"
                     /db_xref="taxon:565557"
     Protein         1..82
                     /product="DUF6332 family protein"
                     /calculated_mol_wt=8873
     Region          3..82
                     /region_name="DUF6332"
                     /note="Family of unknown function (DUF6332); pfam19857"
                     /db_xref="CDD:466209"
ORIGIN      
        1 mgresrwekd altveivfav vsgvllgllv fgavvlpalv wdlpqqansa lrmaggavgl
       61 icaawrmvrv vwrhdayrra gr
//
LOCUS       WP_258044530             254 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Streptomyces sp. SM11].
ACCESSION   WP_258044530
VERSION     WP_258044530.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM11
  ORGANISM  Streptomyces sp. SM11
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 254)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 254)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 254)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Streptomyces sp. SM11"
                     /db_xref="taxon:565557"
     Protein         1..254
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=26354
     Region          <3..252
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(3,22,24,240..243,245,247)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mppagaaskv aggwlvqgew clasgvdhad wlllaapevd atgrparvfa vprsaatihd
       61 twngvglraa gsntvvvgtt vvpdehsapl tallagdgse geprcysapa hlagglllca
      121 palgaarral tawahwarta tlggarpldh sstqerfars aaeidmvelm lseavrradt
      181 dpvtaelvar nrrdaamgae clvaavdrlf rsggahirdv dgdlhrcwad vltiashgal
      241 rmepaaeaha qsfd
//
LOCUS       WP_258044635             301 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Streptomyces sp. SM11].
ACCESSION   WP_258044635
VERSION     WP_258044635.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM11
  ORGANISM  Streptomyces sp. SM11
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 301)
  AUTHORS   Davies,D.R., Mahnke Braam,L., Reznikoff,W.S. and Rayment,I.
  TITLE     The three-dimensional structure of a Tn5 transposase-related
            protein determined to 2.9-A resolution
  JOURNAL   J Biol Chem 274 (17), 11904-11913 (1999)
   PUBMED   10207011
REFERENCE   2  (residues 1 to 301)
  AUTHORS   DasSarma,S.
  TITLE     Identification and analysis of the gas vesicle gene cluster on an
            unstable plasmid of Halobacterium halobium
  JOURNAL   Experientia 49 (6-7), 482-486 (1993)
   PUBMED   8335077
REFERENCE   3  (residues 1 to 301)
  AUTHORS   Ferrante,A.A. and Lessie,T.G.
  TITLE     Nucleotide sequence of IS402 from Pseudomonas cepacia
  JOURNAL   Gene 102 (1), 143-144 (1991)
   PUBMED   1650732
REFERENCE   4  (residues 1 to 301)
  AUTHORS   De Meirsman,C., Van Soom,C., Verreth,C., Van Gool,A. and
            Vanderleyden,J.
  TITLE     Nucleotide sequence analysis of IS427 and its target sites in
            Agrobacterium tumefaciens T37
  JOURNAL   Plasmid 24 (3), 227-234 (1990)
   PUBMED   1963949
REFERENCE   5  (residues 1 to 301)
  AUTHORS   Sato,S., Nakada,Y. and Shiratsuchi,A.
  TITLE     IS421, a new insertion sequence in Escherichia coli
  JOURNAL   FEBS Lett 249 (1), 21-26 (1989)
   PUBMED   2542093
REFERENCE   6  (residues 1 to 301)
  AUTHORS   Kroger,M. and Hobom,G.
  TITLE     Structural analysis of insertion sequence IS5
  JOURNAL   Nature 297 (5862), 159-162 (1982)
   PUBMED   6281654
REFERENCE   7  (residues 1 to 301)
  AUTHORS   Klaer,R., Kuhn,S., Tillmann,E., Fritz,H.J. and Starlinger,P.
  TITLE     The sequence of IS4
  JOURNAL   Mol Gen Genet 181 (2), 169-175 (1981)
   PUBMED   6268937
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01609.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Streptomyces sp. SM11"
                     /db_xref="taxon:565557"
     Protein         1..301
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=33059
     Region          <1..183
                     /region_name="transpos_IS4_1"
                     /note="IS4 family transposase; NF033592"
                     /db_xref="CDD:468101"
ORIGIN      
        1 mltlvecgtr vliaasfgpe segelpyakr llsaldeaml lladaafdgn efldavhqsg
       61 arflvrsgar rvptpaehld dgsyiarigy gvlrvllpvr vieatltvtl adgtvrteqw
      121 rlitnlldpv rypaaelvdl yhrrwqaett yfsikatmld grvlrsrsid gldqevyall
      181 tayqalirag ddaltgrpev pmerisftvl laaatdtvta ghgifpstlv dlvdlvgtig
      241 haaldnllpt hrrqrvkart rknptskygp nagqhpqkaq nytvrttvaf fehglnsrsr
      301 r
//
LOCUS       WP_258044671             328 aa            linear   BCT 02-MAR-2025
DEFINITION  MerR family transcriptional regulator [Streptomyces sp. SM11].
ACCESSION   WP_258044671
VERSION     WP_258044671.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM11
  ORGANISM  Streptomyces sp. SM11
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13411.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Streptomyces sp. SM11"
                     /db_xref="taxon:565557"
     Protein         1..328
                     /product="MerR family transcriptional regulator"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=34078
     Region          25..83
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Site            order(26..28,42,59..61)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:133389"
     Region          126..299
                     /region_name="MtbC1"
                     /note="Methanogenic corrinoid protein MtbC1 [Energy
                     production and conversion]; COG5012"
                     /db_xref="CDD:444036"
ORIGIN      
        1 mnpdmglvie pagelpaeap adgglttgtv arllgvaptt lrswdrrygi gpaareggrh
       61 rrwtaadiaa lrnmcrltsa glpaaeaara vlagtsrdta vprsgrasrp pgplpvgrar
      121 recrglaraa vrldapamde lltavldryg lpaawdevmm palhavgrrw etsgeryiev
      181 ehllswhvsg alrgvsagra papgaglsll acvpgethtl alealaatla qralpvrmfg
      241 adlpvgalee avrrtgpasv vlwaqsrsta srslvarvea vewgvrgart rpvvlvagpg
      301 wageqppgar hpsglaeavd amatlgar
//
LOCUS       WP_258044796             108 aa            linear   BCT 02-MAR-2025
DEFINITION  PilZ domain-containing protein [Sphingomonas citricola].
ACCESSION   WP_258044796
VERSION     WP_258044796.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas citricola
  ORGANISM  Sphingomonas citricola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 108)
  AUTHORS   Galperin,M.Y. and Chou,S.H.
  TITLE     Structural Conservation and Diversity of PilZ-Related Domains
  JOURNAL   J Bacteriol 202 (4), e00664-19 (2020)
   PUBMED   31740493
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 108)
  AUTHORS   Paul,K., Nieto,V., Carlquist,W.C., Blair,D.F. and Harshey,R.M.
  TITLE     The c-di-GMP binding protein YcgR controls flagellar motor
            direction and speed to affect chemotaxis by a 'backstop brake'
            mechanism
  JOURNAL   Mol Cell 38 (1), 128-139 (2010)
   PUBMED   20346719
REFERENCE   3  (residues 1 to 108)
  AUTHORS   Benach,J., Swaminathan,S.S., Tamayo,R., Handelman,S.K.,
            Folta-Stogniew,E., Ramos,J.E., Forouhar,F., Neely,H.,
            Seetharaman,J., Camilli,A. and Hunt,J.F.
  TITLE     The structural basis of cyclic diguanylate signal transduction by
            PilZ domains
  JOURNAL   EMBO J 26 (24), 5153-5166 (2007)
   PUBMED   18034161
REFERENCE   4  (residues 1 to 108)
  AUTHORS   Ryjenkov,D.A., Simm,R., Romling,U. and Gomelsky,M.
  TITLE     The PilZ domain is a receptor for the second messenger c-di-GMP:
            the PilZ domain protein YcgR controls motility in enterobacteria
  JOURNAL   J Biol Chem 281 (41), 30310-30314 (2006)
   PUBMED   16920715
REFERENCE   5  (residues 1 to 108)
  AUTHORS   Amikam,D. and Galperin,M.Y.
  TITLE     PilZ domain is part of the bacterial c-di-GMP binding protein
  JOURNAL   Bioinformatics 22 (1), 3-6 (2006)
   PUBMED   16249258
REFERENCE   6  (residues 1 to 108)
  AUTHORS   Alm,R.A., Bodero,A.J., Free,P.D. and Mattick,J.S.
  TITLE     Identification of a novel gene, pilZ, essential for type 4 fimbrial
            biogenesis in Pseudomonas aeruginosa
  JOURNAL   J Bacteriol 178 (1), 46-53 (1996)
   PUBMED   8550441
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018894.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07238.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Sphingomonas citricola"
                     /db_xref="taxon:2862498"
     Protein         1..108
                     /product="PilZ domain-containing protein"
                     /GO_function="GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /calculated_mol_wt=11961
ORIGIN      
        1 mepavpipap seveenrhal rravkmkahl rdrgntrfei evvdlsvtgf raqtsftlwp
       61 gttvwltlpg laaveavvaw rdkfrygcaf akplhpavfd hivalger
//
LOCUS       WP_258044962             149 aa            linear   BCT 02-MAR-2025
DEFINITION  MauE/DoxX family redox-associated membrane protein [Streptomyces
            sp. SM11].
ACCESSION   WP_258044962
VERSION     WP_258044962.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM11
  ORGANISM  Streptomyces sp. SM11
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 149)
  AUTHORS   van der Palen,C.J., Reijnders,W.N., de Vries,S., Duine,J.A. and van
            Spanning,R.J.
  TITLE     MauE and MauD proteins are essential in methylamine metabolism of
            Paracoccus denitrificans
  JOURNAL   Antonie Van Leeuwenhoek 72 (3), 219-228 (1997)
   PUBMED   9403107
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018942.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07291.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Streptomyces sp. SM11"
                     /db_xref="taxon:565557"
     Protein         1..149
                     /product="MauE/DoxX family redox-associated membrane
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0030416 - methylamine metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=15805
ORIGIN      
        1 mrspwigtga rialagvwcw agwamflhpe tsvyavrayr alpeglvhav gyglpvlela
       61 lavllatglm trfaaalsal llvaflvaii qawargmsid cgcfggggav dpgqtqyare
      121 iirdlaflsl svllirrprt rlsvdavlp
//
LOCUS       WP_258045072             852 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Sphingomonas
            citricola].
ACCESSION   WP_258045072
VERSION     WP_258045072.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas citricola
  ORGANISM  Sphingomonas citricola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 852)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Sphingomonas citricola"
                     /db_xref="taxon:2862498"
     Protein         1..852
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=91610
     Region          67..852
                     /region_name="Fiu"
                     /note="Outer membrane receptor for monomeric catechols
                     [Inorganic ion transport and metabolism]; COG4774"
                     /db_xref="CDD:443806"
ORIGIN      
        1 migfnraavr aallasaaim pganawaqtv pgdtpsqspa paqtsedpad gnadmqdivv
       61 tgttsrdrpl itssaditya drdaidrkap rstaellelv pgifvegtag avsnnysvrg
      121 lqgggqrfvq leedgmpily ggggadfffd qdltidrlea vkggssgvlt vngagatinf
      181 isrrinfnea egaarvtayn yglkrgdfyy sqplaenlaf slggyvqssp gvrdnpfdyq
      241 gwrlkgaley rfdgggflrv takggdvena yyadqpyrft ngepagipsl dtqfgnvggd
      301 aftniavpvs tfahpsgfrp fryrdgiknk taqirvdfek pltdsidlfa karylkysyd
      361 fnglfpgsgt gnagltsavn yltpgagspi ndlltagraa fpqtvrfgik nlrtgvllgs
      421 nqtdalaaln nngflqrttl nhdyidgrdf ganvgarwef esgsfknslt agvmyynvkr
      481 sqdqsatasv vndvrtnsdi ydivaldtnn nvvgtlsdng lvsygdwgag irqrlddsvs
      541 lyandelaig dlridggvrw esdsatardg gtlandqpvq agvvgvirnv gnayngvlsq
      601 nrqlrqkaay tvganysftp nfaiyaryan gfqtnntdpi ttielyeagv ryqygrlfsg
      661 satvfrtnfr nqnynfanpa npsqqqnina dlrtngvevd avvrpttwfs ldfqgvfqdp
      721 klvnlqldgq tqlgfegnrp ertpatlftv tptislpnga gevygrykyi gkifadagng
      781 valpdygvts vgvnlnlren vqltlnadnv fdvigltegn prqgqtqavt dgyfyargip
      841 gptyggsltf rf
//
LOCUS       WP_258044904              41 aa            linear   BCT 02-MAR-2025
DEFINITION  aa3-type cytochrome c oxidase subunit IV [Sphingomonas citricola].
ACCESSION   WP_258044904
VERSION     WP_258044904.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas citricola
  ORGANISM  Sphingomonas citricola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 41)
  AUTHORS   Svensson-Ek,M., Abramson,J., Larsson,G., Tornroth,S., Brzezinski,P.
            and Iwata,S.
  TITLE     The X-ray crystal structures of wild-type and EQ(I-286) mutant
            cytochrome c oxidases from Rhodobacter sphaeroides
  JOURNAL   J Mol Biol 321 (2), 329-339 (2002)
   PUBMED   12144789
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019452.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07835.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..41
                     /organism="Sphingomonas citricola"
                     /db_xref="taxon:2862498"
     Protein         1..41
                     /product="aa3-type cytochrome c oxidase subunit IV"
                     /calculated_mol_wt=4402
ORIGIN      
        1 maaqpsqlka hvstydrvia mmkwgalava iiaffviwli a
//
LOCUS       WP_258045190             320 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Streptomyces sp. SM11].
ACCESSION   WP_258045190
VERSION     WP_258045190.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM11
  ORGANISM  Streptomyces sp. SM11
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Streptomyces sp. SM11"
                     /db_xref="taxon:565557"
     Protein         1..320
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=35552
     Region          49..308
                     /region_name="PRK09685"
                     /note="DNA-binding transcriptional activator FeaR;
                     Provisional"
                     /db_xref="CDD:236612"
ORIGIN      
        1 mprsdrfagw qqcmtdvvap meitsphadd fwadhrllri edtllwptrl hasryrrtpr
       61 lirqsdpgll hmtlvlpgcg kmlveqgglr savephdlyv ldmsrpcdvr tddepivgvg
      121 vdiprsllrl pmstsldhvl grrlpgrhgf galltqfitq ladpsdvygp adaprlnrvl
      181 ldlaagllsr gldretalsp etrtrnlvlt irsfiggnlh dprltpaava aahhmstrhl
      241 hrlfrregtt vaalirsqrl drarrdladp alahtplhti aarcgfgapa hfsrvfraah
      301 gmspsdyrev klregaepvr
//
LOCUS       WP_258045217              83 aa            linear   BCT 02-MAR-2025
DEFINITION  SulP family inorganic anion transporter, partial [Mycobacterium
            kansasii].
ACCESSION   WP_258045217
VERSION     WP_258045217.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00916.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         1..>83
                     /product="SulP family inorganic anion transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:1902358 - sulfate transmembrane transport
                     [Evidence IEA]"
     Region          25..>83
                     /region_name="SUL1"
                     /note="Sulfate permease or related transporter, MFS
                     superfamily [Inorganic ion transport and metabolism];
                     COG0659"
                     /db_xref="CDD:440424"
ORIGIN      
        1 mqptephhsq apdkgppvsr tdrlrsiirh dlpsslvvfl ialplsvgia iasdapvlsg
       61 lisavvggiv lgfiggspls vsg
//
LOCUS       WP_258045222            1662 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein [Mycobacterium kansasii].
ACCESSION   WP_258045222
VERSION     WP_258045222.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1662
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         1..1662
                     /product="helicase-related protein"
                     /calculated_mol_wt=182770
     Region          <6..155
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          <18..497
                     /region_name="DISARM_DrmD"
                     /note="DISARM system SNF2-like helicase DrmD, long form;
                     NF038317"
                     /db_xref="CDD:468471"
ORIGIN      
        1 mdisssaren kalqithqwi rehgrvlvft qhtdtvtgll rrmeaeglta rafhgsmsas
       61 eraatiaafr sgeapvmist dagaegqnlq fcncvlnydl pwnpmrieqr igrvdrltqp
      121 rdevfvanly acrtidesvy rllaeklrmf ellfgqvtti lgelddsksa tfetrvldal
      181 faesdakmer lltqlgtela dareragtli aadgdlsswm taafehrkgl tkagsaelmp
      241 elterarrrq rrvqtwvrrv lealgaqvlh dtgdgegafl tvqfdeefee elggrtlmhl
      301 afdrhglehh pdaelcavgs pvfdellgll rmrgdmhatv pvipddlgps pfrhaptirl
      361 irrrlipagt wsgqatfrat vgeaettehi itaeingand vrlprrplsd gevlpatfqm
      421 pseivaefer eaarrlekir rdraeeveqq qrqeldrvrr syqariaeal yedearlrra
      481 lkseerrlsr rpdvrarakl lamtldeddw iveetwaaeg dveatltyew gfseppeves
      541 dasqrsiavl alcsgahwvd etettrcgsc dfdlcaacgd davfadcpvc gvascgscrq
      601 etgglclrcg spgrapefdt efavawrlgr eailfvgera aeltrpgepa ssllvrdedv
      661 adpdrirlra yavqnglpad sglvlrdlsr spttdnpsrl rlrrsenvri elsiaanpts
      721 eidrdaladl pehaaatvdg esdlklvsll eklrhevppp tppcvlvtrr stftdvylea
      781 eglveqvsai addgtlntvd ehsasfewre sslqspelae aelgglrvvl errndavlvs
      841 ayeeghsdkt sqwialpdgf saasqlgwfg vleslgasgg rvgqrtneir evigpvpvpm
      901 ecqlldrrvr pvvevamida eidlvpvdsd slralgapsn pvskplpgrl paelnralle
      961 rtarsftavv rngfeiheiw rghgtathey rtfdgrptap tlddigarev dfgvcrdghf
     1021 yaagraalca scrtwscmac deidhqasig cpgcsasicr rclsedhvas taicvlcgdt
     1081 vcsecgrdpq vhccpicdre vcsscrvgel cpacsrlgpa tddelsclpv elaatgaavl
     1141 agvdknamtv ilnrggaieq avvrngsldr wiafgrsmid dayklrlsas rllntqvvpi
     1201 vepldreari daphlvlqsd riffavwsve klgragrgan pfvnadgdlp hlvarefppl
     1261 trlpqpaakt paqvdhvvas ipqhrsidlt lrwhrvghdv llvdsgiltr rfdgsslhek
     1321 ltrwastgat ppwvtqawqp aptvyryavs divevvivgm aslralgvra ddrpewyais
     1381 gsqqapaatm lgrwmgigda devsaftdpn rislssvsna mhisrrvrpl gsiqptsrpg
     1441 hprttpnala awlpgahvvt pelgilpndf rlllvqqlnt eerrtalvig ahveeavtve
     1501 dgqvwvhean lrpgttdarr idstttlprd hgvidreghf vpdaprcryc ggricpvcle
     1561 gmvscdccaa pickrcankp kvdlwlcpac atlrratrre arqhgrfllt rgmligadpv
     1621 htvivehtkh rwmrhaedga qsviespvve gflnerltdg dd
//
LOCUS       WP_258045226             208 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding oxidoreductase, partial [Mycobacterium kansasii].
ACCESSION   WP_258045226
VERSION     WP_258045226.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 208)
  AUTHORS   Lu,G., Campbell,W.H., Schneider,G. and Lindqvist,Y.
  TITLE     Crystal structure of the FAD-containing fragment of corn nitrate
            reductase at 2.5 A resolution: relationship to other flavoprotein
            reductases
  JOURNAL   Structure 2 (9), 809-821 (1994)
   PUBMED   7812715
REFERENCE   2  (residues 1 to 208)
  AUTHORS   Hyde,G.E., Crawford,N.M. and Campbell,W.H.
  TITLE     The sequence of squash NADH:nitrate reductase and its relationship
            to the sequences of other flavoprotein oxidoreductases. A family of
            flavoprotein pyridine nucleotide cytochrome reductases
  JOURNAL   J Biol Chem 266 (35), 23542-23547 (1991)
   PUBMED   1748631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013161.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00970.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         <1..208
                     /product="FAD-binding oxidoreductase"
     Region          1..205
                     /region_name="O2ase_reductase_like"
                     /note="The oxygenase reductase FAD/NADH binding domain
                     acts as part of the multi-component bacterial oxygenases
                     which oxidize hydrocarbons using oxygen as the oxidant.
                     Electron transfer is from NADH via FAD (in the oxygenase
                     reductase) and an [2FE-2S]...; cd06187"
                     /db_xref="CDD:99784"
     Site            order(11..14,28..30,32,36..38,76,79,204)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99784"
     Site            order(11,13..14)
                     /site_type="other"
                     /note="FAD binding motif [chemical binding]"
                     /db_xref="CDD:99784"
     Site            order(35,38,41,48,56,58)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99784"
     Site            order(71,75..78,80)
                     /site_type="other"
                     /note="beta-alpha-beta structure motif"
                     /db_xref="CDD:99784"
     Site            order(76..77,102..104,179..180)
                     /site_type="other"
                     /note="NAD binding pocket [chemical binding]"
                     /db_xref="CDD:99784"
ORIGIN      
        1 vhvpqcprrw rylspaipad pdgriefhvr vvpgglvsna ivnetrpgdr wrlssphggf
       61 hvdrdggdvl mvagstglap lralildlsr fadnprvhlf fgaryscely dlpmlwqiaa
      121 hnpwlsvspv seyprdpswa adypdvsppr glhvrqtgrl aemvtkyggw gdrqilicgg
      181 pnmvratkaa liakgapper iqhdplsq
//
LOCUS       WP_258045241             450 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Mycobacterium
            kansasii].
ACCESSION   WP_258045241
VERSION     WP_258045241.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 450)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         <1..>450
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          5..445
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation domain of nonribosomal
                     peptide synthetases (NRPSs) and similar domains; cd19540"
                     /db_xref="CDD:380463"
ORIGIN      
        1 vrpavvplsf aqsrlwfidq vqgpspvyhm awavrlrgrl dvaalgaawa dvvgrheslr
       61 tvfsavagvp qqvvvpverv rlgwrvvdag gwtagrvgqa vaavvgrcfd lateipvrvq
      121 llvvgereyv lvvvvhhiaa dgwsvaalaa dlsvayasrc ggraprwapl avqyvdytlw
      181 qranlgelsd sgsaiaaqlv fwekalagmp erlelptdrp ypqvadyrgd qvvvvwsael
      241 qqrvarvare hrassfmvvq aalsvllsql cassdvavgf avagrgdpal dglvgffvnt
      301 lvlrvhvegd psfaellaqv rarslaafeh qdvpfealve rlnparslay hpliqvlvaw
      361 qnfaggadfa gglrlgdvqv sslpvrthta rmdlvfslae sftetggpag ingvvefrtd
      421 vfdaasieml vkrlervlva vtadpgrrls
//
LOCUS       WP_258045280             358 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein, partial [Streptomyces sp.
            B188M101].
ACCESSION   WP_258045280
VERSION     WP_258045280.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. B188M101
  ORGANISM  Streptomyces sp. B188M101
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 358)
  AUTHORS   Scherr,N., Honnappa,S., Kunz,G., Mueller,P., Jayachandran,R.,
            Winkler,F., Pieters,J. and Steinmetz,M.O.
  TITLE     Structural basis for the specific inhibition of protein kinase G, a
            virulence factor of Mycobacterium tuberculosis
  JOURNAL   Proc Natl Acad Sci U S A 104 (29), 12151-12156 (2007)
   PUBMED   17616581
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2007 Oct 9;104(41):16388]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028228.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16918.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Streptomyces sp. B188M101"
                     /db_xref="taxon:1736042"
     Protein         <1..358
                     /product="tetratricopeptide repeat protein"
     Region          39..356
                     /region_name="PknG_TPR"
                     /note="Protein kinase G tetratricopeptide repeat;
                     pfam16918"
                     /db_xref="CDD:435652"
     Site            order(132,135..136,138,162,165..166,169..170,172..173,196,
                     199..200,203..204,207)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          132..155
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          160..190
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          195..219
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 ayappaqvpa praaeqaqgg pagpyvavap ygpfgatagg vrlalfdtra tslalpvprv
       61 daldpnagfl aglmasapte litalhavpa psletrlrel rarlemreld saaralttle
      121 gehpddwrvv wyrgvtslvt gdhetaalsf davydafpge mapklalgic aevlgqldna
      181 aeyyrlvwat dpgfvsaafg larvqiaage raaavstles vpeasihyta arvaavrarl
      241 rershrepll vdltaagiqv aalaafgldp vrheqlstev lgkaldwvls gspgvpglgg
      301 paagspdark llgaelnerg lrfglersyr mlarlaqrgd erielveran rfrprtwv
//
LOCUS       WP_258045271             345 aa            linear   BCT 02-MAR-2025
DEFINITION  protein kinase, partial [Streptomyces sp. B188M101].
ACCESSION   WP_258045271
VERSION     WP_258045271.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. B188M101
  ORGANISM  Streptomyces sp. B188M101
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 345)
  AUTHORS   Hunter,T. and Plowman,G.D.
  TITLE     The protein kinases of budding yeast: six score and more
  JOURNAL   Trends Biochem Sci 22 (1), 18-22 (1997)
   PUBMED   9020587
REFERENCE   2  (residues 1 to 345)
  AUTHORS   Hanks,S.K. and Hunter,T.
  TITLE     Protein kinases 6. The eukaryotic protein kinase superfamily:
            kinase (catalytic) domain structure and classification
  JOURNAL   FASEB J 9 (8), 576-596 (1995)
   PUBMED   7768349
REFERENCE   3  (residues 1 to 345)
  AUTHORS   Hanks,S.K. and Quinn,A.M.
  TITLE     Protein kinase catalytic domain sequence database: identification
            of conserved features of primary structure and classification of
            family members
  JOURNAL   Methods Enzymol 200, 38-62 (1991)
   PUBMED   1956325
REFERENCE   4  (residues 1 to 345)
  AUTHORS   Hanks,S.K., Quinn,A.M. and Hunter,T.
  TITLE     The protein kinase family: conserved features and deduced phylogeny
            of the catalytic domains
  JOURNAL   Science 241 (4861), 42-52 (1988)
   PUBMED   3291115
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07714.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Streptomyces sp. B188M101"
                     /db_xref="taxon:1736042"
     Protein         1..>345
                     /product="protein kinase"
                     /GO_function="GO:0004672 - protein kinase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006468 - protein phosphorylation
                     [Evidence IEA]"
     Region          <95..>178
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
ORIGIN      
        1 mddyagrvla dryrlplpps dgyelaetra fdtysgqevl vrqvplpeiv daevldadgr
       61 aslsgratgr avrrstdpav rraieaaqaa aqvpdhprld qvfdvfaeag slwivselva
      121 arplaallae rplnpyraae igsdvltalr vlhahgwthr nitvrtvlvc ddgrvmltgl
      181 aagaaeealc gyapeprpda dpvaapttyg ipavepappr eldgayalpa arsdaeveya
      241 eyaavegrag gaeyeavqey adhrsgegdg gdrefpvppl pqgyaprpgd gpdddrydgr
      301 yddgrgedrh dppsgreagp vpeqradaqe ivprpaapav pytav
//
LOCUS       WP_258045283             377 aa            linear   BCT 02-MAR-2025
DEFINITION  NB-ARC domain-containing protein, partial [Streptomyces sp.
            B188M101].
ACCESSION   WP_258045283
VERSION     WP_258045283.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. B188M101
  ORGANISM  Streptomyces sp. B188M101
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 377)
  AUTHORS   van der Biezen,E.A. and Jones,J.D.
  TITLE     The NB-ARC domain: a novel signalling motif shared by plant
            resistance gene products and regulators of cell death in animals
  JOURNAL   Curr Biol 8 (7), R226-R227 (1998)
   PUBMED   9545207
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013124.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00931.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Streptomyces sp. B188M101"
                     /db_xref="taxon:1736042"
     Protein         <1..377
                     /product="NB-ARC domain-containing protein"
                     /GO_function="GO:0043531 - ADP binding [Evidence IEA]"
     Region          13..>255
                     /region_name="COG3903"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443109"
     Region          287..>334
                     /region_name="DUF4423"
                     /note="Domain of unknown function (DUF4423); pfam14394"
                     /db_xref="CDD:405143"
ORIGIN      
        1 apagpagqaa palqrhrgph spwlglvpam lpmdpvgfvg rrfeladvle elrgsrsggr
       61 gvlltgeaga gktalavrag hicrddfwqg qlyidlrres ggaksplevl gcflralipe
      121 rgadlpatld erlqlyrsal srrrvlvvld nvvdagqvrp llasgpgcrt litgrrslas
      181 ldgvravrig rldqaearel lvsavgkgrl eaepgavhrl ltacdgnpla lrfcaarlaa
      241 rprwpverlv arldqgevra eewgegsldp laglragvle lgpflrpvlr tlaraergaf
      301 tpaaaarrln wseertrmal aalveaglla svgepdtvlv tprgggaavr pareryrcsp
      361 lvrllfrept aglrqps
//
LOCUS       WP_258045338             451 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Streptomyces sp.
            B188M101].
ACCESSION   WP_258045338
VERSION     WP_258045338.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. B188M101
  ORGANISM  Streptomyces sp. B188M101
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 451)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Streptomyces sp. B188M101"
                     /db_xref="taxon:1736042"
     Protein         1..>451
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          11..429
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mnirraghdp lpataaqrgv qiaekldgda gafhcgavle ltghvetdql rravaravad
       61 aealrvrfae rddrllqhvl apaaaqaeaa laevdlsgar dpaaaadawa adrlatapal
      121 vgddplvaha llrlspsrhr lvltyhhavl dgygqslhta riaevytalt agravpesta
      181 gslaalvaqd rayeesvrre ddraywlerl agadtpgssr yrgagprvrs rgrlteeqtr
      241 piveaaraag vpwtvlvial vaahrraagd qdevlfglpl ttrvgraalt tpgmlanelp
      301 lrltvarwdt vadvvgrvrg vlgpalrhqr yrgeelrrel gwtgagfgal mlnvmafdrt
      361 lrfgsveavt dqlstgpvhg ltlnvhgapd gsgglaldlh ahadehseae laairddlig
      421 hllrasadpg rpvgamlprt ahrdaapdes l
//
LOCUS       WP_258045387             114 aa            linear   BCT 02-MAR-2025
DEFINITION  ASCH domain-containing protein [Mesorhizobium sp. NBSH29].
ACCESSION   WP_258045387
VERSION     WP_258045387.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium sp. NBSH29
  ORGANISM  Mesorhizobium sp. NBSH29
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 114)
  AUTHORS   Iyer,L.M., Burroughs,A.M. and Aravind,L.
  TITLE     The ASCH superfamily: novel domains with a fold related to the PUA
            domain and a potential role in RNA metabolism
  JOURNAL   Bioinformatics 22 (3), 257-263 (2006)
   PUBMED   16322048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016178.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04266.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Mesorhizobium sp. NBSH29"
                     /db_xref="taxon:2654249"
     Protein         1..114
                     /product="ASCH domain-containing protein"
                     /calculated_mol_wt=12715
     Region          17..102
                     /region_name="ASCH"
                     /note="Predicted RNA-binding protein, contains PUA-like
                     ASCH domain [General function prediction only]; COG2411"
                     /db_xref="CDD:441966"
ORIGIN      
        1 msssiqtlgv vgrlfpliis gektstirfc evrivpgpmr yvcdddatkv aevdvircte
       61 mslssvaayl gmldrwpddt mlqgmrehyp eieltdivqv iehtpfvsar eshr
//
LOCUS       WP_258045388             139 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Escherichia
            coli].
ACCESSION   WP_258045388
VERSION     WP_258045388.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>139
                     /product="ABC transporter substrate-binding protein"
     Region          1..>139
                     /region_name="PRK15109"
                     /note="antimicrobial peptide ABC transporter periplasmic
                     binding protein SapA; Provisional"
                     /db_xref="CDD:185064"
ORIGIN      
        1 mrqvlssllv iaglvsgqai aapespphad irdsgfvycv sgqvntfnps kassglivdt
       61 laaqfydrll dvdpytyrlm pelaeswevl dngatyrfhl rrdvpfqktd wftptrkmna
      121 ddvvftfqri fdrnnpkhn
//
LOCUS       WP_258045397             664 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Mesorhizobium sp. NBSH29].
ACCESSION   WP_258045397
VERSION     WP_258045397.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium sp. NBSH29
  ORGANISM  Mesorhizobium sp. NBSH29
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 664)
  AUTHORS   Das,A.K., Cohen,P.W. and Barford,D.
  TITLE     The structure of the tetratricopeptide repeats of protein
            phosphatase 5: implications for TPR-mediated protein-protein
            interactions
  JOURNAL   EMBO J 17 (5), 1192-1199 (1998)
   PUBMED   9482716
REFERENCE   2  (residues 1 to 664)
  AUTHORS   Lamb,J.R., Tugendreich,S. and Hieter,P.
  TITLE     Tetratrico peptide repeat interactions: to TPR or not to TPR?
  JOURNAL   Trends Biochem Sci 20 (7), 257-259 (1995)
   PUBMED   7667876
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019339.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07719.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Mesorhizobium sp. NBSH29"
                     /db_xref="taxon:2654249"
     Protein         1..664
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=72828
     Region          <37..539
                     /region_name="PEP_TPR_lipo"
                     /note="putative PEP-CTERM system TPR-repeat lipoprotein;
                     TIGR02917"
                     /db_xref="CDD:274350"
     Site            order(43..44,47..48,50,74,77..78,81..82,84..85,107,
                     111..112,115..116,119)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          43..67
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          72..101
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          106..135
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          277..305
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          310..337
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          349..373
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          372..>539
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          382..407
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          419..445
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(421..422,425..426,428,452,455..456,459..460,
                     462..463,487,490..491,494..495,498)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          450..481
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          486..514
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          505..662
                     /region_name="XkdP"
                     /note="Cytoplasmic potassium-binding protein
                     Kbp/XkdP/YgaU, contains LysM domain [Inorganic ion
                     transport and metabolism]; COG1652"
                     /db_xref="CDD:441258"
ORIGIN      
        1 mpltnrirls tlavigmals lqlavaketp papveissfs gaylagrsae idndlsgavt
       61 yyaralsfdp enqqlqqslm lglvsqgrfd ealvyaeklk ttpdverfsr valavdtfrk
      121 kdyekakywl klavssdldk litglmtgwa eagqghtkea lehldtlqgp ewytvfvayh
      181 raliaegagm teeaaksyei sirdlsagsa apetwlraae syarflardg kkqealkvld
      241 rseefsvgrp avaelrgeie ngqpiaalve gptqgaseif lnlgtalnrg ggeafvrlyl
      301 qfalalmpds dvvlmqlaai seqqqdaeqa idlygrikpe sslkriaelq rglnladlkr
      361 hdeaiaqltt lieaapddmr gylalggvya skedfesaae lydravtrip aptaedwsvf
      421 yqrgiayerl kqwsraepnf lkalelfpdq pqvmnylgys wvdmntklee glelikkave
      481 arpsdgyivd slgwahyrlg nyeeavgele ravslkpdda vlndhlgday wragrqleat
      541 fqwahardmk pdadvlasvq kklkeglpal dpkaagkvlp dtpadtkeal pekkselvvp
      601 eapqvvtavt asytvqrgqs lwsiaaaqlg dgnryteild lnpqlegnpg rlvpgqelkl
      661 pagn
//
LOCUS       WP_258045405             103 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Mesorhizobium sp.
            NBSH29].
ACCESSION   WP_258045405
VERSION     WP_258045405.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium sp. NBSH29
  ORGANISM  Mesorhizobium sp. NBSH29
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 103)
  AUTHORS   Fujikawa,N., Kurumizaka,H., Nureki,O., Terada,T., Shirouzu,M.,
            Katayama,T. and Yokoyama,S.
  TITLE     Structural basis of replication origin recognition by the DnaA
            protein
  JOURNAL   Nucleic Acids Res 31 (8), 2077-2086 (2003)
   PUBMED   12682358
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019903.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08299.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Mesorhizobium sp. NBSH29"
                     /db_xref="taxon:2654249"
     Protein         1..103
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /GO_process="GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /calculated_mol_wt=11451
     Region          2..103
                     /region_name="Bac_DnaA_C"
                     /note="C-terminal domain of bacterial DnaA proteins. The
                     DNA-binding C-terminal domain of DnaA contains a
                     helix-turn-helix motif that specifically interacts with
                     the DnaA box, a 9-mer motif that occurs repetitively in
                     the replication origin oriC. Multiple...; cl07055"
                     /db_xref="CDD:471583"
     Site            order(28,37..38,45,51..53,61..65,68,71..72)
                     /site_type="other"
                     /note="DnaA box-binding interface [nucleotide binding]"
                     /db_xref="CDD:119330"
ORIGIN      
        1 mielceamid ltaalftvss kemrkpgrsr seiarvrqia myvshvvlgl smsevgkgfq
       61 rerttvlhac hliedlrddd efdclvakae riaqaafknr kaa
//
LOCUS       WP_258045410             197 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF922 domain-containing protein [Mesorhizobium sp. NBSH29].
ACCESSION   WP_258045410
VERSION     WP_258045410.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium sp. NBSH29
  ORGANISM  Mesorhizobium sp. NBSH29
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 197)
  AUTHORS   Lenart,A., Dudkiewicz,M., Grynberg,M. and Pawlowski,K.
  TITLE     CLCAs - a family of metalloproteases of intriguing phylogenetic
            distribution and with cases of substituted catalytic sites
  JOURNAL   PLoS One 8 (5), e62272 (2013)
   PUBMED   23671590
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017816.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06037.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Mesorhizobium sp. NBSH29"
                     /db_xref="taxon:2654249"
     Protein         1..197
                     /product="DUF922 domain-containing protein"
                     /calculated_mol_wt=21803
     Region          1..195
                     /region_name="DUF922"
                     /note="Bacterial protein of unknown function (DUF922);
                     cl02415"
                     /db_xref="CDD:470570"
ORIGIN      
        1 mrfitltamt taalcafqap anagvkvtik qasyeisgks gatlldamdr sgpkhgfltr
       61 aiaqtrytvg wnivwaqngk qcrvkkadal lsitytfpql kdrlapdmqr rwtgfikgvt
      121 rheethgria rqmvtaadrv vsatrmahdp gcrqsqalvk kkvatiyaey ekrqvlfdkk
      181 ehsshgnves lvlalkk
//
LOCUS       WP_258045455             205 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator receiver domain, partial [Escherichia coli].
ACCESSION   WP_258045455
VERSION     WP_258045455.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 205)
  AUTHORS   Bellieny-Rabelo,D., Pretorius,W.J.S. and Moleleki,L.N.
  TITLE     Novel Two-Component System-Like Elements Reveal Functional Domains
            Associated with Restriction-Modification Systems and paraMORC
            ATPases in Bacteria
  JOURNAL   Genome Biol Evol 13 (3) (2021)
   PUBMED   33565597
REFERENCE   2  (residues 1 to 205)
  AUTHORS   Casino,P., Rubio,V. and Marina,A.
  TITLE     The mechanism of signal transduction by two-component systems
  JOURNAL   Curr Opin Struct Biol 20 (6), 763-771 (2010)
   PUBMED   20951027
REFERENCE   3  (residues 1 to 205)
  AUTHORS   Gao,R. and Stock,A.M.
  TITLE     Biological insights from structures of two-component proteins
  JOURNAL   Annu Rev Microbiol 63, 133-154 (2009)
   PUBMED   19575571
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039256.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19192.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>205
                     /product="response regulator receiver domain"
     Region          18..176
                     /region_name="Response_reg_2"
                     /note="Response receiver domain; pfam19192"
                     /db_xref="CDD:437036"
ORIGIN      
        1 mtvanynslv qktfcenair svvmidddfl tysesiraln nevdldynki dsskraatle
       61 sffqsknmic dvdngsvnfd vdrirksdli ivdyhldnna pdktlkllqd lkdsdhlnmi
      121 viytrenlet vwmqisstlk galdinslii dydnedvqsy wedvvlpnln dngnkaltrd
      181 etiayikdsk pcrrikrlih ddavl
//
LOCUS       WP_258045504             178 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase family protein, partial
            [Escherichia coli].
ACCESSION   WP_258045504
VERSION     WP_258045504.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 178)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00725.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..178
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
     Region          <1..164
                     /region_name="fadB"
                     /note="fatty acid oxidation complex subunit alpha FadB;
                     PRK11730"
                     /db_xref="CDD:183293"
ORIGIN      
        1 aqavivacfp qrmqkayrda tdapfdanrc gqknclgfwl yisdskgkpk keedaavedl
       61 laevsqpkrd fseeeiiarm mipmvnevvr cleegiiatp aeadmalvyg lgfppfhgga
      121 frwldtlgsa kyldmaqqyq hlgplyevpe glrnkarhne pyyppvepar pvgdlkta
//
LOCUS       WP_258045509             194 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Escherichia coli].
ACCESSION   WP_258045509
VERSION     WP_258045509.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 194)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 194)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..194
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=22060
     Region          <1..193
                     /region_name="PRK09692"
                     /note="integrase; Provisional"
                     /db_xref="CDD:170049"
ORIGIN      
        1 mpalppselp rfmesltnas irletrmlie wqlltwvrpg eavrarwsdi dttnsiwnip
       61 adfmkmkklh kvplskealr ilelmksisg hrewvfpsik aplnhmheqt anaaiirmgf
      121 ggelvahgmr siartaaees gkfraevlea alahlkkdei iaaynraeyl ierqslmqww
      181 sdyvqaqrsn alva
//
LOCUS       WP_258045485             162 aa            linear   BCT 02-MAR-2025
DEFINITION  thioesterase family protein [Mesorhizobium sp. NBSH29].
ACCESSION   WP_258045485
VERSION     WP_258045485.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium sp. NBSH29
  ORGANISM  Mesorhizobium sp. NBSH29
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 162)
  AUTHORS   Dillon,S.C. and Bateman,A.
  TITLE     The Hotdog fold: wrapping up a superfamily of thioesterases and
            dehydratases
  JOURNAL   BMC Bioinformatics 5, 109 (2004)
   PUBMED   15307895
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024675.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13279.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Mesorhizobium sp. NBSH29"
                     /db_xref="taxon:2654249"
     Protein         1..162
                     /product="thioesterase family protein"
                     /calculated_mol_wt=18315
     Region          <17..158
                     /region_name="PRK07531"
                     /note="carnitine 3-dehydrogenase"
                     /db_xref="CDD:236044"
ORIGIN      
        1 misttpfvsr pmdiqkdwid ynghlnmayy nvlfdrcsde afelmgmgpd yvksrrltvy
       61 taeihvcyvr elhlghtvtg tfqlldhdek rlhayqeirh sdgwlaatse sltlhidmeg
      121 pkvapfpndv aekvaqmaqt hanlptpera grsigikrkp ss
//
LOCUS       WP_258045604              81 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome b562, partial [Escherichia coli].
ACCESSION   WP_258045604
VERSION     WP_258045604.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 81)
  AUTHORS   Arnesano,F., Banci,L., Bertini,I., Faraone-Mennella,J., Rosato,A.,
            Barker,P.D. and Fersht,A.R.
  TITLE     The solution structure of oxidized Escherichia coli cytochrome b562
  JOURNAL   Biochemistry 38 (27), 8657-8670 (1999)
   PUBMED   10393541
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019008.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07361.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>81
                     /product="cytochrome b562"
                     /GO_component="GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /GO_process="GO:0022900 - electron transport chain
                     [Evidence IEA]"
     Region          1..>81
                     /region_name="Cytochrom_B562"
                     /note="Cytochrome b562; cl01546"
                     /db_xref="CDD:445465"
ORIGIN      
        1 mrksllaila vsslvfssas faadlednme tlndnlkvie kadnaaqvkd altmmraaal
       61 daqkatppkl edkspdspem k
//
LOCUS       WP_258045767             137 aa            linear   BCT 02-MAR-2025
DEFINITION  radical SAM protein [Mycobacterium kansasii].
ACCESSION   WP_258045767
VERSION     WP_258045767.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 137)
  AUTHORS   Benjdia,A., Leprince,J., Guillot,A., Vaudry,H., Rabot,S. and
            Berteau,O.
  TITLE     Anaerobic sulfatase-maturating enzymes: radical SAM enzymes able to
            catalyze in vitro sulfatase post-translational modification
  JOURNAL   J Am Chem Soc 129 (12), 3462-3463 (2007)
   PUBMED   17335281
REFERENCE   2  (residues 1 to 137)
  AUTHORS   Berteau,O., Guillot,A., Benjdia,A. and Rabot,S.
  TITLE     A new type of bacterial sulfatase reveals a novel maturation
            pathway in prokaryotes
  JOURNAL   J Biol Chem 281 (32), 22464-22470 (2006)
   PUBMED   16766528
REFERENCE   3  (residues 1 to 137)
  AUTHORS   Sofia,H.J., Chen,G., Hetzler,B.G., Reyes-Spindola,J.F. and
            Miller,N.E.
  TITLE     Radical SAM, a novel protein superfamily linking unresolved steps
            in familiar biosynthetic pathways with radical mechanisms:
            functional characterization using new analysis and information
            visualization methods
  JOURNAL   Nucleic Acids Res 29 (5), 1097-1106 (2001)
   PUBMED   11222759
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015983.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04055.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         1..137
                     /product="radical SAM protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0051539 - 4 iron, 4 sulfur cluster
                     binding [Evidence IEA]"
                     /calculated_mol_wt=14657
     Region          2..>105
                     /region_name="MoaA"
                     /note="GTP 3',8-cyclase (molybdenum cofactor biosynthesis
                     protein MoaA) [Coenzyme transport and metabolism];
                     COG2896"
                     /db_xref="CDD:442141"
ORIGIN      
        1 mslthrcnlr csycmpadgl drmadsdrlt dgevvrlvgi vvarlgirev rftggepllr
       61 rglestvaqv arlrprpris lttngiglhr rtaqlaaaav nrvsllrfag lsrcaatyas
      121 aadhrdlgpg thnpvsa
//
LOCUS       WP_258045771             809 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease [Mycobacterium kansasii].
ACCESSION   WP_258045771
VERSION     WP_258045771.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 809)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01061.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         1..809
                     /product="ABC transporter permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=85290
     Region          8..100
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cl00062"
                     /db_xref="CDD:469597"
     Region          13..>198
                     /region_name="COG3456"
                     /note="Predicted component of the type VI protein
                     secretion system, contains a FHA domain [Signal
                     transduction mechanisms, Intracellular trafficking,
                     secretion, and vesicular transport]"
                     /db_xref="CDD:442679"
     Site            order(28..29,43..44,46,67..68)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:438746"
     Region          268..478
                     /region_name="CcmA"
                     /note="ABC-type multidrug transport system, ATPase
                     component [Defense mechanisms]; COG1131"
                     /db_xref="CDD:440746"
     Region          601..799
                     /region_name="YadH"
                     /note="ABC-type multidrug transport system, permease
                     component [Defense mechanisms]; COG0842"
                     /db_xref="CDD:440604"
ORIGIN      
        1 mipnappltv wfgsvryvfa pgrdvlagpg ehcdirlhhp gpagrpapdv vlrfqgthwv
       61 amdgsgngif vdgtrlsavd irdgqtiaig dprrgprltf qlaapaaapt asadppqahr
      121 ptppptgqwr npvkpteqat qrmpaklith pepaqevaqr ivaesatqri paaptfgrtt
      181 kpirltphgt ppapeaghpp padqpapage eprgrglver mtdatrklla arpdagsaee
      241 gpatsrlplk pgartvgvaa yrlgstvdgr ellsdisfta rpgsliavvg psenrttali
      301 ellaglrplg sgvltvdghd vqaepdwvrs rigvvprhda vpdcltvera lgyaaelrlp
      361 pdtpaatrdr vvdhvldele ltphrktrva klapevrrca smatelvsrp sllvvdepna
      421 gldpaqqshv mavlrrqadl gcvvvlatts lahlnmcdqv llltpagtla fagppvqles
      481 amgttdwsev faqvgadpgg ahqafldhqq asgslpsapp avaapgrppa elttgqqlgl
      541 airrqlrlfv arrvsflfll llpfalgglt llipgdsgfd ragrsapnph eateilaamn
      601 laavlmgill tigdlvgerq mlrreqsvgl stpaylvaki tvfglvaaiq tailtaivva
      661 gkgppvhdav llrnatvely vsvaatavvs miiglalstl grsqrevlpl avpvilasal
      721 fgggllplvg twgfdqiswl ipahwgfaaa astvdlrrvd plaahngvwt hysgwwafdm
      781 amlvilgalw agfvlfrlrp pshgtsark
//
LOCUS       WP_258045792             262 aa            linear   BCT 02-MAR-2025
DEFINITION  glycohydrolase toxin TNT-related protein, partial [Mycobacterium
            kansasii].
ACCESSION   WP_258045792
VERSION     WP_258045792.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 262)
  AUTHORS   Sun,J., Siroy,A., Lokareddy,R.K., Speer,A., Doornbos,K.S.,
            Cingolani,G. and Niederweis,M.
  TITLE     The tuberculosis necrotizing toxin kills macrophages by hydrolyzing
            NAD
  JOURNAL   Nat Struct Mol Biol 22 (9), 672-678 (2015)
   PUBMED   26237511
REFERENCE   2  (residues 1 to 262)
  AUTHORS   Danilchanka,O., Sun,J., Pavlenok,M., Maueroder,C., Speer,A.,
            Siroy,A., Marrero,J., Trujillo,C., Mayhew,D.L., Doornbos,K.S.,
            Munoz,L.E., Herrmann,M., Ehrt,S., Berens,C. and Niederweis,M.
  TITLE     An outer membrane channel protein of Mycobacterium tuberculosis
            with exotoxin activity
  JOURNAL   Proc Natl Acad Sci U S A 111 (18), 6750-6755 (2014)
   PUBMED   24753609
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025387.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14021.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         <1..262
                     /product="glycohydrolase toxin TNT-related protein"
                     /GO_function="GO:0050135 - NADP+ nucleosidase activity
                     [Evidence IEA]"
                     /note="This protein contains a domain related to
                     Tuberculosis Necrotizing Toxin, which is the C-terminal
                     effector domain of outer membrane channel protein CpnT,
                     and which has a lethal NAD+-glycohydrolase activity.; This
                     protein contains a domain related to Tuberculosis
                     Necrotizing Toxin, which is the C-terminal effector domain
                     of outer membrane channel protein CpnT, and which has a
                     lethal NAD+-glycohydrolase activity.; This protein
                     contains a domain related to Tuberculosis Necrotizing
                     Toxin, which is the C-terminal effector domain of outer
                     membrane channel protein CpnT, and which has a lethal
                     NAD+-glycohydrolase activity.; This protein contains a
                     domain related to Tuberculosis Necrotizing Toxin, which is
                     the C-terminal effector domain of outer membrane channel
                     protein CpnT, and which has a lethal NAD+-glycohydrolase
                     activity.; This protein contains a domain related to
                     Tuberculosis Necrotizing Toxin, which is the C-terminal
                     effector domain of outer membrane channel protein CpnT,
                     and which has a lethal NAD+-glycohydrolase activity.; This
                     protein contains a domain related to Tuberculosis
                     Necrotizing Toxin, which is the C-terminal effector domain
                     of outer membrane channel protein CpnT, and which has a
                     lethal NAD+-glycohydrolase activity.; This protein
                     contains a domain related to Tuberculosis Necrotizing
                     Toxin, which is the C-terminal effector domain of outer
                     membrane channel protein CpnT, and which has a lethal
                     NAD+-glycohydrolase activity.; This protein contains a
                     domain related to Tuberculosis Necrotizing Toxin, which is
                     the C-terminal effector domain of outer membrane channel
                     protein CpnT, and which has a lethal NAD+-glycohydrolase
                     activity."
     Region          <1..176
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          191..>258
                     /region_name="TNT"
                     /note="Tuberculosis necrotizing toxin; pfam14021"
                     /db_xref="CDD:433650"
ORIGIN      
        1 ggsvsapsge klppghsqpd episaqvpaa ssgespsaaq saagskplaa stpasgspgh
       61 stlaghqlsh ggtqsggvgd ahpnepsplq ggghwdeggg aphepsppgd dsqrgdhgqh
      121 hgkddkptta reafpeakay gdlsepeyqn lfedenghli ypdasdpakp yaipgsvhnm
      181 tkaeilahln gtlldrigyp gggwlapegt pyearaiphd sldkpyfvye vqaekglppg
      241 wtieysraap wfgqpgggpn ia
//
LOCUS       WP_258045798             472 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Mycobacterium
            kansasii].
ACCESSION   WP_258045798
VERSION     WP_258045798.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 472)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         1..>472
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..424
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation domain of nonribosomal
                     peptide synthetases (NRPSs) and similar domains; cd19540"
                     /db_xref="CDD:380463"
ORIGIN      
        1 mwfihkyegp satynvplal rmtgeldvea liaaigdlvt rhealrtvfp etdgvpwqri
       61 vpaeavdspv svtevadeqe laqavaqaaq yrfdlttqip irvdvlrlsa tecvlvlvvh
      121 hiaadgaslv plahdlaaay ttrclgqpph wsplpvqyad ytlwqheilg ceddpnsqma
      181 rqvaywrdel agapehitla sdrprparqs frggmvpfti gaklrerlqq lahdtgttms
      241 mmlqaglavl lrklgagddv tiggpiagrt dqaltnligf fvnswvlrvd tsgnptfadv
      301 lqqvrakala ayenqdapfe rlvevlnprr stayhplfqv afalqnnpvp avelpgieie
      361 fltvstgaak fdlfinlvdl ppaagkpqam pasieyaadl fnrdtierfa gyylrllhtv
      421 ttdpyrriev idvldpaecv qmltrsntta atgpaglaga tvpglfaeqv ar
//
LOCUS       WP_258045816             228 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein, partial [Escherichia coli].
ACCESSION   WP_258045816
VERSION     WP_258045816.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 228)
  AUTHORS   Wang,J., Hofnung,M. and Charbit,A.
  TITLE     The C-terminal portion of the tail fiber protein of bacteriophage
            lambda is responsible for binding to LamB, its receptor at the
            surface of Escherichia coli K-12
  JOURNAL   J Bacteriol 182 (2), 508-512 (2000)
   PUBMED   10629200
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024939.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13550.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>228
                     /product="phage tail protein"
     Region          <1..>228
                     /region_name="COG4733"
                     /note="Phage-related protein, tail protein J [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443767"
ORIGIN      
        1 rpsdvvwpyt nsdvvvddng vgfrysfsal kdrhtavevn ytdpqngwqt stelvedpda
       61 ilrygrnllk vdafgctsrg qahraglwvi ktelletqtv dftlgsqglr htpgdiieic
      121 dndyagtltg grilsidaas rtltldrevt lpetgtstvn lingsgkpvr vditahpapd
      181 riqvsvlpdg vatygvwgls lpslrrrlfr cvsirentdg tfaitavq
//
LOCUS       WP_258045817             225 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase, partial [Escherichia coli].
ACCESSION   WP_258045817
VERSION     WP_258045817.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 225)
  AUTHORS   Todone,F., Vanoni,M.A., Mozzarelli,A., Bolognesi,M., Coda,A.,
            Curti,B. and Mattevi,A.
  TITLE     Active site plasticity in D-amino acid oxidase: a crystallographic
            analysis
  JOURNAL   Biochemistry 36 (19), 5853-5860 (1997)
   PUBMED   9153426
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013434.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01266.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>225
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
     Region          <102..>225
                     /region_name="DAO"
                     /note="FAD dependent oxidoreductase; cl40741"
                     /db_xref="CDD:477422"
ORIGIN      
        1 aaneaatkgf eeqtrrlken mgtletwadk tgkafksmwd aildigrpes sadmlasaqk
       61 afdeadkkwq wyqsrsqrrg ktasfranlq gawddrenar lglaaatlql pndetgdcql
      121 ftqnlarmae qagvkfrfnt pvdqllcdge qiygvkcgde vikadayvma fgsystamlk
      181 givdipvypl kgysltipia qedgapvsti ldetykiait rfdnr
//
LOCUS       WP_258045836             148 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphate acyltransferase, partial [Escherichia coli].
ACCESSION   WP_258045836
VERSION     WP_258045836.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013665.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01515.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..148
                     /product="phosphate acyltransferase"
                     /GO_function="GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
     Region          <4..136
                     /region_name="PTA_PTB"
                     /note="Phosphate acetyl/butaryl transferase; cl17212"
                     /db_xref="CDD:450173"
ORIGIN      
        1 aitgeeprva mlsfssngsa rhpcvanvqq ateivrerap klvvdgelqf daafvpevaa
       61 qkapasplqg kanvmvfpsl eagnigykia qrlggyravg pliqglaapm hdlsrgcsvq
      121 eiielalvaa vprqtevnre sslqtlve
//
LOCUS       WP_258045844             432 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Leifsonia shinshuensis].
ACCESSION   WP_258045844
VERSION     WP_258045844.1
KEYWORDS    RefSeq.
SOURCE      Leifsonia shinshuensis
  ORGANISM  Leifsonia shinshuensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Leifsonia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Leifsonia shinshuensis"
                     /db_xref="taxon:150026"
     Protein         1..432
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=46094
     Region          24..424
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(34..35,38..39,42,80,138..139,141..143,146,166,
                     169..170,173,253,256..257,260..262,265,293,297,348..349,
                     353,357,373,376..377,380..381,384)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 midnevstrp gtrarllpet rrglialglg gtlewydwml fglvasylgp kffpdsnpit
       61 atlsalavfa vgfffrpvgg ivlgtyadri grrkimilsv vlmaattlvi avcptyeqig
      121 pwagvillla rivqgistgv egplataqgl elvpegregt vagvmsafvn fgilaaslvt
      181 fltvlllgpa amadwgwrvp falavvgsiv vlylrrrlpe tmtpqeleea stgkiwssvg
      241 rnwlsilaiv fvvgavqvyn yawttglpnt arivmkespt avfgittllg vvmvigsliv
      301 gklvdgkals kwyiwtrala ipsmflvlly vrpgmgafag vvlggsivmv lnmtlynvvs
      361 stlmpkasrg agtalgygig vavfggtaay lvvwcseihq twlfsvygav lmvlsivlyv
      421 larrfngihi gr
//
LOCUS       WP_258045974             868 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Leifsonia shinshuensis].
ACCESSION   WP_258045974
VERSION     WP_258045974.1
KEYWORDS    RefSeq.
SOURCE      Leifsonia shinshuensis
  ORGANISM  Leifsonia shinshuensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Leifsonia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024991.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13604.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Leifsonia shinshuensis"
                     /db_xref="taxon:150026"
     Protein         1..868
                     /product="AAA family ATPase"
                     /calculated_mol_wt=93783
     Region          28..268
                     /region_name="MobF"
                     /note="MobF family relaxase; NF041492"
                     /db_xref="CDD:469380"
     Region          386..845
                     /region_name="RecD"
                     /note="ATPase/5#-3# helicase helicase subunit RecD of the
                     DNA repair enzyme RecBCD (exonuclease V) [Replication,
                     recombination and repair]; COG0507"
                     /db_xref="CDD:440273"
ORIGIN      
        1 miaaagyada vmtryvveng airddlltkd qlkdwvdgld pitgerrgrd lespvadlvl
       61 datinapksf siaamldpel aaayedlqdr lrdriiklwq selnarrgkg gairedlara
      121 evvelrhers rsldphkhrh lwlnvkvqgq dgkwsnidtr valrfqnvin aegdlasrtd
      181 pawihalaak gftlnadgei sqlqhlvrpl skrsaqiean kitrtlwwkq qhpgqepshd
      241 vlsqidnwaw avgrpnkpge ldedgwaalv reelhtadpt lgmqrspapl psvavedldi
      301 ellaakavvd adarstgsgg rfsvmdvrag alraiaetgv vaargvlttl aeevvartrt
      361 vtlisepdap khvkhlmavs tatlkatlaq kvdafsapgq ildtdevaai ahalepdrtl
      421 dggqlagaaa iggtsrnvvi sgpagtgktt mlkvagaalr rhghkmiiva ptkkasavag
      481 retmsssssl hqllhdygwr waptmsgate wrrlsigeid pttgrgysgp risinpgdrv
      541 vvdeagmldl eaasalldva yaagagvalv gdqrqalpvg hsgamalfwh rspdrfelta
      601 thrfkdpawa dltlrlrdpq gkdemheiae dlirtdhvmt tdndvaarea mvegwfdasc
      661 rhetialita thteaqeise aiqrrrlgsg aissgraisg qsdqaiyigd vvqtrrndsa
      721 advqnrqnwi vrtigkdyai laastdstdl rkvslayaes hmhlayattv ygvqgettdr
      781 alvgpgvdaa glyvgltrgk qqnaavlvap sfesaksqlv emmqrrtlee tieksraaal
      841 telrraaesp tgptiaapdr qltrlglq
//
LOCUS       WP_258045958             950 aa            linear   BCT 02-MAR-2025
DEFINITION  glycogen debranching N-terminal domain-containing protein
            [Leifsonia shinshuensis].
ACCESSION   WP_258045958
VERSION     WP_258045958.1
KEYWORDS    RefSeq.
SOURCE      Leifsonia shinshuensis
  ORGANISM  Leifsonia shinshuensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Leifsonia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026092.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14742.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..950
                     /organism="Leifsonia shinshuensis"
                     /db_xref="taxon:150026"
     Protein         1..950
                     /product="glycogen debranching N-terminal
                     domain-containing protein"
                     /calculated_mol_wt=100600
     Region          8..226
                     /region_name="PepE"
                     /note="Peptidase E [Amino acid transport and metabolism];
                     COG3340"
                     /db_xref="CDD:442569"
     Region          304..483
                     /region_name="GDE_N_bis"
                     /note="N-terminal domain of (some) glycogen debranching
                     enzymes; pfam14742"
                     /db_xref="CDD:434175"
     Region          517..897
                     /region_name="GDB1"
                     /note="Glycogen debranching enzyme (alpha-1,6-glucosidase)
                     [Carbohydrate transport and metabolism]; COG3408"
                     /db_xref="CDD:442634"
ORIGIN      
        1 mtaiaptila tcgglvagew tdslygpllh haielarvtg raprvthint aggdqrhveg
       61 geleaaraag vdashvrffp hpnipdlreh ilaqdvvwvs ggsllnllav wrahgldeil
      121 reawqrgvvl aggsagglcw heggttasrg pdisalpdgl glvpgslavh ydsdprrrpa
      181 hqaavasgel pegyaleegt glvyrgttlv eivseredaa vwrilrtevd gravisetri
      241 eprvlpsprh llhpiphhdp iphydpvphn hpdphpihdr gganatmtqp lqpllhdsvv
      301 vltapsqaws aadgavdggg ihgfyhsdlr vldrilltvg gdvpehiata gpdaasavft
      361 alarriddat adprvrldrt rtvvagslre rivvrnalrt pitttvevav radftpmqti
      421 kagltgaehp vssesangri vfrsgpvtat laapdarvsv dgqdaalrwe idvpahghvt
      481 ldwaidvddp tavvagaaps aewaafrast gdsrlaswld raladlqslr msttarpddt
      541 flaagapwff tlfgrdslwa arlllplgtd iaastlrvla hfqgtetvse taeqpgkimh
      601 elrpaaltip gegvvlpply ygtvdatalw igllhdawkw gmaddevrel lpamqaalaw
      661 mrdhgdsdgd gfleyvdttg hglanqgwkd sgdsiqwkdg tladgpialc evqgyayeaa
      721 vggaelldaf gleggdewrd waaelktrfd aafwiddpag aypavaldaa krkvdtvtsn
      781 ighllgtgil tpeqsaliar rlaspelssg yglrtmstds ggywplsyhg gsvwahdtai
      841 aimglsrdgh taeadlladg llaaadgfsy rmpelhsgds aeqtsapipy paacrpqaws
      901 aaaavavlsa rlglradaqa gsldvrptpg agsirvsglr fagaprdlev
//
LOCUS       WP_258046021             211 aa            linear   BCT 02-MAR-2025
DEFINITION  TetR/AcrR family transcriptional regulator C-terminal
            domain-containing protein [Leifsonia shinshuensis].
ACCESSION   WP_258046021
VERSION     WP_258046021.1
KEYWORDS    RefSeq.
SOURCE      Leifsonia shinshuensis
  ORGANISM  Leifsonia shinshuensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Leifsonia.
REFERENCE   1  (residues 1 to 211)
  AUTHORS   Hinrichs,W., Kisker,C., Duvel,M., Muller,A., Tovar,K., Hillen,W.
            and Saenger,W.
  TITLE     Structure of the Tet repressor-tetracycline complex and regulation
            of antibiotic resistance
  JOURNAL   Science 264 (5157), 418-420 (1994)
   PUBMED   8153629
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014906.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02909.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Leifsonia shinshuensis"
                     /db_xref="taxon:150026"
     Protein         1..211
                     /product="TetR/AcrR family transcriptional regulator
                     C-terminal domain-containing protein"
                     /GO_process="GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /calculated_mol_wt=22157
     Region          9..194
                     /region_name="PRK13756"
                     /note="TetR family transcriptional regulator"
                     /db_xref="CDD:172294"
ORIGIN      
        1 mtgnesarrh grddvaetal rilddyglpd ltmrrlaaal dvqpsalywh fpnkqtllae
       61 ladriigraa vtapdapwpd rvraesaalr dallayrdga evvastaalg lgaapaqqrl
      121 aaavrsggfd aetagraata llhfvlghvs heqqrmqfds igvlatgeaa dpfdqgdsaa
      181 afafgvnllv gglqrlavdd esaegvsrsr m
//
LOCUS       WP_258046043             246 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Leifsonia
            shinshuensis].
ACCESSION   WP_258046043
VERSION     WP_258046043.1
KEYWORDS    RefSeq.
SOURCE      Leifsonia shinshuensis
  ORGANISM  Leifsonia shinshuensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Leifsonia.
REFERENCE   1  (residues 1 to 246)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 246)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Leifsonia shinshuensis"
                     /db_xref="taxon:150026"
     Protein         1..246
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=24934
     Region          12..246
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(16,18..19,21,40..42,84..86,136..138,166,170,
                     196..199)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(110,138,166,170)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mntttdptpp tvlvtgatsg igkeiarqla argwnvllga rdrargeeta aevggtvlpl
       61 dvtdadsvas aaaavpaldv linnagisld iadvvtdvdv evfrrtyetn vfgvvavtna
      121 flpalrrsah privnissgt gsltwstgpn pqfdhvaass grgaayrssk aaldgltify
      181 shalaadgvk vnalapglra tnlnpraaga ggdpaeaaeg avrlatlpdd gpsgllfswd
      241 gtvapw
//
LOCUS       WP_258046072             249 aa            linear   BCT 02-MAR-2025
DEFINITION  alanine racemase C-terminal domain-containing protein [Leifsonia
            shinshuensis].
ACCESSION   WP_258046072
VERSION     WP_258046072.1
KEYWORDS    RefSeq.
SOURCE      Leifsonia shinshuensis
  ORGANISM  Leifsonia shinshuensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Leifsonia.
REFERENCE   1  (residues 1 to 249)
  AUTHORS   Shaw,J.P., Petsko,G.A. and Ringe,D.
  TITLE     Determination of the structure of alanine racemase from Bacillus
            stearothermophilus at 1.9-A resolution
  JOURNAL   Biochemistry 36 (6), 1329-1342 (1997)
   PUBMED   9063881
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013038.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00842.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Leifsonia shinshuensis"
                     /db_xref="taxon:150026"
     Protein         1..249
                     /product="alanine racemase C-terminal domain-containing
                     protein"
                     /calculated_mol_wt=25700
     Region          10..206
                     /region_name="PLPDE_III"
                     /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
                     Enzymes; cl00261"
                     /db_xref="CDD:469695"
     Site            38
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:143484"
     Region          114..240
                     /region_name="Ala_racemase_C"
                     /note="Alanine racemase, C-terminal domain; pfam00842"
                     /db_xref="CDD:459960"
ORIGIN      
        1 maaatgvrrr afvdldvirs nattaatapl pdctadlrad ayghglipva raltdaevgg
       61 llvsrvedaa aiadegipvp vtvgfpagrh asgpahllgp ellgltdlag tapalrltge
      121 iiavkrvgad rgvsygytyr terpstlvlv algyadgilr vasnkapvlv gettgritgr
      181 iamdqfvvdi gdagaqpgdp vvlfgdparg epstldweaa lgvaapvits rlgrrierqy
      241 ghwtrraaq
//
LOCUS       WP_258046075             553 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Leifsonia shinshuensis].
ACCESSION   WP_258046075
VERSION     WP_258046075.1
KEYWORDS    RefSeq.
SOURCE      Leifsonia shinshuensis
  ORGANISM  Leifsonia shinshuensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Leifsonia.
REFERENCE   1  (residues 1 to 553)
  AUTHORS   Mande,S.S., Sarfaty,S., Allen,M.D., Perham,R.N. and Hol,W.G.
  TITLE     Protein-protein interactions in the pyruvate dehydrogenase
            multienzyme complex: dihydrolipoamide dehydrogenase complexed with
            the binding domain of dihydrolipoamide acetyltransferase
  JOURNAL   Structure 4 (3), 277-286 (1996)
   PUBMED   8805537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07992.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Leifsonia shinshuensis"
                     /db_xref="taxon:150026"
     Protein         1..553
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=57466
     Region          23..>146
                     /region_name="Crp"
                     /note="cAMP-binding domain of CRP or a regulatory subunit
                     of cAMP-dependent protein kinases [Signal transduction
                     mechanisms]; COG0664"
                     /db_xref="CDD:440428"
     Region          235..553
                     /region_name="TrxB"
                     /note="Thioredoxin reductase [Posttranslational
                     modification, protein turnover, chaperones]; COG0492"
                     /db_xref="CDD:440258"
ORIGIN      
        1 mptppaerpp frvpvgtaan pvleqdalar lmalgepeef avgdslfrag deeldffvme
       61 sgrvdivrea tgtsparvva qwqageflge lsmltgqasl ltarivepsr vrripnavfk
      121 qlmsndgels etllaafrar rrllmaaadr ttqifgtegs aaamalrrya armelphrwt
      181 dvsteagrqa lessehagla lplvvsrgav igaatplala eavglayryr dgdefdlvvv
      241 gagpaglaag iygaseglrt lvldalapgg qaaassrien ylgfpsgvsg aeitelglvq
      301 alkfgvrlsa paevtalspr eggheltlae gdairaraiv vatgaryrrl plerwadfeg
      361 gsiffattel eartvdrrpa vvvggansag qaalylaelg sevalvvrgg diaakmstyl
      421 vdrvrsheri tvhtssdvta lhggdqleav tltssatgad ervpaaalfc fvgaeprasw
      481 lsgaavdgsg flltdvdlpp avgaergplp fetsvvgvfa agdvrhgsmk riaaavgega
      541 savasvhral aga
//
LOCUS       WP_258046095             417 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Leifsonia shinshuensis].
ACCESSION   WP_258046095
VERSION     WP_258046095.1
KEYWORDS    RefSeq.
SOURCE      Leifsonia shinshuensis
  ORGANISM  Leifsonia shinshuensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Leifsonia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Leifsonia shinshuensis"
                     /db_xref="taxon:150026"
     Protein         1..417
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=45896
     Region          22..379
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mpdtsgtndi ppapaehrpm tilmgcdtfp pdvngaarfa erlaaglver ghdmhivaps
       61 asrkhgtwie ehegekmtah rlrswrwyph dwlrfalpwm skanarrvld evkpdvvhfq
      121 shivvgrgla yeaqkrgiri iatnhvmpen iieftrlpkf lhhtfvsiaw rdarksfdra
      181 eaittptrra aefleaatgl rnvhaiscgi dahnytpdft prtgnhilfv grvtgekqid
      241 vllnavkllp ealdakleiv gggdqfknlq alaetlgiad rvtflgyvtd eelrqaytra
      301 tvfampsiae lqsiatmeam asalpvvaad amalphlvhd genghlfrpg daqdladkle
      361 svltlpqeel dvlknaslri vathdiqtti stfeslyrge pvadpvtaaa pgvptpe
//
LOCUS       WP_258046160             281 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Leifsonia
            shinshuensis].
ACCESSION   WP_258046160
VERSION     WP_258046160.1
KEYWORDS    RefSeq.
SOURCE      Leifsonia shinshuensis
  ORGANISM  Leifsonia shinshuensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Leifsonia.
REFERENCE   1  (residues 1 to 281)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 281)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Leifsonia shinshuensis"
                     /db_xref="taxon:150026"
     Protein         1..281
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=28246
     Region          7..254
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(10,12..13,15,34..36,87..89,136..138,151,155,
                     181..184)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(111,138,151,155)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mtesillvtg tssgiglata vaaarhgftv vatmrdtgka galqsaasaa gvtldvqpld
       61 vtssasveac ldhirstygr ldallnnaga ghlgtieles vedvravmev nffgvvavtk
      121 aalpllresg grvvtvssvg gvvgqpfnea ycaakfaveg fmesltpvaa tvgvgvsvie
      181 pgavstefva svqaqetpav agtpyegalt aylartaaaf dpaaaqtpeg vadvivdvlt
      241 aeqpparvqt seaaqrfagv kladldgahv qavtrhwvtg a
//
LOCUS       WP_258046166             499 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Leifsonia shinshuensis].
ACCESSION   WP_258046166
VERSION     WP_258046166.1
KEYWORDS    RefSeq.
SOURCE      Leifsonia shinshuensis
  ORGANISM  Leifsonia shinshuensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Leifsonia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Leifsonia shinshuensis"
                     /db_xref="taxon:150026"
     Protein         1..499
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=53873
     Region          40..482
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mrktpllati aigiaaslal agcsgassss sagadasiav gslyepvnld ntagggqgvt
       61 ealngnvyeg lfkltddgkv qpllatkytt sadgltytft lrdgvkfhsg kpltsesvkt
      121 siervlatds qsarksqlav isgiqtpddk tvvislksrs islpynlsyv wiygpgttny
      181 ktaedgtgpy tlgtwkrgss lslerwngyw gakaknkevv ydyftdasal snalltnqvd
      241 ivtsiqspds ltqfegnkny tisngksttk ellafndkva pfnnaevrka vysaidtkkl
      301 lssiwgkygt ligsmvppsd pwyedltkvn pydtalakke laaaglpngf sftldtptyd
      361 phpavaeflk selakvgvtv ninsisadqw ytkvfknhdf tatlqehvnd rdvvwygnpd
      421 fywgydnpqv tawvneaeqs sttaeqtakl klvneqiakd aasawlylyp qivvasssvs
      481 gypvnglnsq fyayditkk
//
LOCUS       WP_258045906             114 aa            linear   BCT 02-MAR-2025
DEFINITION  ParB family protein [Leifsonia shinshuensis].
ACCESSION   WP_258045906
VERSION     WP_258045906.1
KEYWORDS    RefSeq.
SOURCE      Leifsonia shinshuensis
  ORGANISM  Leifsonia shinshuensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Leifsonia.
REFERENCE   1  (residues 1 to 114)
  AUTHORS   Huang,L., Yin,P., Zhu,X., Zhang,Y. and Ye,K.
  TITLE     Crystal structure and centromere binding of the plasmid segregation
            protein ParB from pCXC100
  JOURNAL   Nucleic Acids Res 39 (7), 2954-2968 (2011)
   PUBMED   21123191
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036700.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18064.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Leifsonia shinshuensis"
                     /db_xref="taxon:150026"
     Protein         1..114
                     /product="ParB family protein"
                     /calculated_mol_wt=12443
     Region          55..99
                     /region_name="ParB_C"
                     /note="Centromere-binding protein ParB C-terminal;
                     pfam18064"
                     /db_xref="CDD:436244"
ORIGIN      
        1 mtlqdlspas tdaptepara eespdeaeaq ltavagtrta arrttvtfyl setlrnrara
       61 ayrstsfeek dsswsemlnk aliaeverre aeynrgemfa aseapltpgr pigf
//
LOCUS       WP_258046262             948 aa            linear   BCT 02-MAR-2025
DEFINITION  galactose oxidase-like domain-containing protein [Leifsonia
            shinshuensis].
ACCESSION   WP_258046262
VERSION     WP_258046262.1
KEYWORDS    RefSeq.
SOURCE      Leifsonia shinshuensis
  ORGANISM  Leifsonia shinshuensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Leifsonia.
REFERENCE   1  (residues 1 to 948)
  AUTHORS   Doman-Pytka,M. and Bardowski,J.
  TITLE     Pullulan degrading enzymes of bacterial origin
  JOURNAL   Crit Rev Microbiol 30 (2), 107-121 (2004)
   PUBMED   15239382
REFERENCE   2  (residues 1 to 948)
  AUTHORS   Oslancova,A. and Janecek,S.
  TITLE     Oligo-1,6-glucosidase and neopullulanase enzyme subfamilies from
            the alpha-amylase family defined by the fifth conserved sequence
            region
  JOURNAL   Cell Mol Life Sci 59 (11), 1945-1959 (2002)
   PUBMED   12530525
REFERENCE   3  (residues 1 to 948)
  AUTHORS   Lee,H.S., Kim,M.S., Cho,H.S., Kim,J.I., Kim,T.J., Choi,J.H.,
            Park,C., Lee,H.S., Oh,B.H. and Park,K.H.
  TITLE     Cyclomaltodextrinase, neopullulanase, and maltogenic amylase are
            nearly indistinguishable from each other
  JOURNAL   J Biol Chem 277 (24), 21891-21897 (2002)
   PUBMED   11923309
REFERENCE   4  (residues 1 to 948)
  AUTHORS   Firbank,S.J., Rogers,M.S., Wilmot,C.M., Dooley,D.M., Halcrow,M.A.,
            Knowles,P.F., McPherson,M.J. and Phillips,S.E.
  TITLE     Crystal structure of the precursor of galactose oxidase: an unusual
            self-processing enzyme
  JOURNAL   Proc Natl Acad Sci U S A 98 (23), 12932-12937 (2001)
   PUBMED   11698678
REFERENCE   5  (residues 1 to 948)
  AUTHORS   Park,K.H., Kim,T.J., Cheong,T.K., Kim,J.W., Oh,B.H. and Svensson,B.
  TITLE     Structure, specificity and function of cyclomaltodextrinase, a
            multispecific enzyme of the alpha-amylase family
  JOURNAL   Biochim Biophys Acta 1478 (2), 165-185 (2000)
   PUBMED   10825529
REFERENCE   6  (residues 1 to 948)
  AUTHORS   Ito,N., Phillips,S.E., Yadav,K.D. and Knowles,P.F.
  TITLE     Crystal structure of a free radical enzyme, galactose oxidase
  JOURNAL   J Mol Biol 238 (5), 794-814 (1994)
   PUBMED   8182749
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020683.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09118.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Leifsonia shinshuensis"
                     /db_xref="taxon:150026"
     Protein         1..948
                     /product="galactose oxidase-like domain-containing
                     protein"
                     /calculated_mol_wt=96214
     Region          1..65
                     /region_name="Big_7"
                     /note="Bacterial Ig domain; pfam17957"
                     /db_xref="CDD:436171"
     Region          151..198
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          155..436
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          201..245
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          349..400
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          442..540
                     /region_name="E_set_GO_C"
                     /note="C-terminal Early set domain associated with the
                     catalytic domain of galactose oxidase; cd02851"
                     /db_xref="CDD:199882"
     Region          <562..909
                     /region_name="COG4733"
                     /note="Phage-related protein, tail protein J [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443767"
ORIGIN      
        1 mtgpaggstv agtvavsata tddvgvasvq flldgaplss avtsspytiq wdstsvangs
       61 hslsaiardg agnqatappi avtvanttnd psvvgswgpv vpwpevsiha altdtgkvlt
      121 wqgdfsqngq qylldpvsgt yiqvpngavd lfcagqavla dgriaviggt atsgglgita
      181 vnafdpatqt wqplksmnhp rwyptgttla dgrvlvtsgs ntsstdivki pevynpptnt
      241 wtdltaasnd ipyypfmyql pdgrvlqaga seqatstqtl dvakqqwtti dsqvldgasi
      301 tnyapgkflk agtasdggft gisantaytl dmnqpnpawr ptapmayprs fvdltnlpdg
      361 tvlatgggtd ksgqdlskav kpaeiwnpat gtwttvaalt aprlyhsvai llpdgrvfvs
      421 ggggdtgvad qlsyqiyspp ylfkgarpti tsapstvqyg asafvqtpda aniasvslir
      481 tgsdthafdq ntrgmqlsfs qaagglnvql ppngdwappg hymlmivnaq gvpstaamvr
      541 fpapyedtap ptaptapsat gavgsvalgw tastdnvgvt gydiyrsgts gftpstanli
      601 kqvggsttsy tdaglaagay yyrieardaa gnvsppsnev tgtaladttp psapgslvat
      661 agaggiaisw sassddvgvt gytiirngsp lttttgtayt daavvggtsy tytvtardaa
      721 gnvsaasnsa tatavsgprt itvdklvtkh qgtaasmvav ggltttgtne lllafvssdg
      781 ssasqiasvt gggltwtlrq rsngqpgtae iwqavapvpl snvtvtatqk sgswqssltv
      841 agflgadtat gavaaanafs gaptatlttt ragswvwgag tdwstahart vgagqtlvdq
      901 ylspsgdayw lqrtntptat tgtavtindt apttdmwdla lveilpap
//
LOCUS       WP_258046299             326 aa            linear   BCT 02-MAR-2025
DEFINITION  SGNH/GDSL hydrolase family protein [Sphingomonas folli].
ACCESSION   WP_258046299
VERSION     WP_258046299.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas folli
  ORGANISM  Sphingomonas folli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 326)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 326)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00657.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Sphingomonas folli"
                     /db_xref="taxon:2862497"
     Protein         1..326
                     /product="SGNH/GDSL hydrolase family protein"
                     /GO_function="GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /calculated_mol_wt=33156
     Region          1..282
                     /region_name="COG3240"
                     /note="Phospholipase/lecithinase/hemolysin [Lipid
                     transport and metabolism, General function prediction
                     only]"
                     /db_xref="CDD:442472"
     Region          297..320
                     /region_name="PEPxxWA-CTERM"
                     /note="PEPxxWA-CTERM sorting domain; NF035944"
                     /db_xref="CDD:411533"
ORIGIN      
        1 migrvaracc alllmaaspa taqtapyssl tvfgdslvda gniralglga dpalgyangr
       61 ftngydytdl lsiamygtpt rasllggsny afggarasdt sgvpdaraqv aaygaalasg
      121 ktvdptglyv lnfggndvfa avapgapagy tsdtafllda asqyaaavqd ladlgarnil
      181 vtgfpvatag lpldlsieae kylttdlagl svadgvrvtq fsylgffgrv qadpsafglp
      241 plilpdpsda attcqgagal pdctgyfsld gihptaaihr alyddlnrql glglpavpep
      301 atwammilgf alvgtslrrr rvaamv
//
LOCUS       WP_258046292             309 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase family 9 protein [Sphingomonas folli].
ACCESSION   WP_258046292
VERSION     WP_258046292.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas folli
  ORGANISM  Sphingomonas folli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 309)
  AUTHORS   Kadrmas,J.L. and Raetz,C.R.
  TITLE     Enzymatic synthesis of lipopolysaccharide in Escherichia coli.
            Purification and properties of heptosyltransferase i
  JOURNAL   J Biol Chem 273 (5), 2799-2807 (1998)
   PUBMED   9446588
REFERENCE   2  (residues 1 to 309)
  AUTHORS   Campbell,J.A., Davies,G.J., Bulone,V. and Henrissat,B.
  TITLE     A classification of nucleotide-diphospho-sugar glycosyltransferases
            based on amino acid sequence similarities
  JOURNAL   Biochem J 326 (Pt 3) (Pt 3), 929-939 (1997)
   PUBMED   9334165
  REMARK    Erratum:[Biochem J 1998 Feb 1;329(Pt 3):719]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013257.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01075.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Sphingomonas folli"
                     /db_xref="taxon:2862497"
     Protein         1..309
                     /product="glycosyltransferase family 9 protein"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=33329
     Region          58..251
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Region          <188..251
                     /region_name="RfaF"
                     /note="ADP-heptose:LPS heptosyltransferase [Cell
                     wall/membrane/envelope biogenesis]; COG0859"
                     /db_xref="CDD:440620"
ORIGIN      
        1 melhsswaev mrardyvaaw sleraviaar dpatrddprl pyhqrwvwdg rsvdgadvlv
       61 rcyhglgdtl qfarylpala rrasrvtvea pvrlhpllag iaevslhafd parplaprac
      121 dleitelpga lalappdipv pylrvapapi psttvglchr agdwdadrsl peamlaplaa
      181 rhrcltlvaa psalpvinpd gcpfdlaata alvagcaavv tvdtmvahla galgrptwll
      241 lkhdpdwrwd parhdsdwyp tlrlhaqphp gdwspavaav trelgafidd qgetihgqpa
      301 qpigarllg
//
LOCUS       WP_258046306             165 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar basal body-associated FliL family protein [Sphingomonas
            folli].
ACCESSION   WP_258046306
VERSION     WP_258046306.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas folli
  ORGANISM  Sphingomonas folli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 165)
  AUTHORS   Tachiyama,S., Chan,K.L., Liu,X., Hathroubi,S., Peterson,B.,
            Khan,M.F., Ottemann,K.M., Liu,J. and Roujeinikova,A.
  TITLE     The flagellar motor protein FliL forms a scaffold of
            circumferentially positioned rings required for stator activation
  JOURNAL   Proc Natl Acad Sci U S A 119 (4) (2022)
   PUBMED   35046042
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2022 Apr 5;119(14):e2202702119.
            doi: 10.1073/pnas.2202702119.. PMID: 35363571]
REFERENCE   2  (residues 1 to 165)
  AUTHORS   Takekawa,N., Isumi,M., Terashima,H., Zhu,S., Nishino,Y., Sakuma,M.,
            Kojima,S., Homma,M. and Imada,K.
  TITLE     Structure of Vibrio FliL, a New Stomatin-like Protein That Assists
            the Bacterial Flagellar Motor Function
  JOURNAL   mBio 10 (2), e00292-19 (2019)
   PUBMED   30890608
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 165)
  AUTHORS   Schoenhals,G.J. and Macnab,R.M.
  TITLE     FliL is a membrane-associated component of the flagellar basal body
            of Salmonella
  JOURNAL   Microbiology (Reading) 145 (Pt 7), 1769-1775 (1999)
   PUBMED   10439416
REFERENCE   4  (residues 1 to 165)
  AUTHORS   Kuo,S.C. and Koshland,D.E. Jr.
  TITLE     Sequence of the flaA (cheC) locus of Escherichia coli and discovery
            of a new gene
  JOURNAL   J Bacteriol 166 (3), 1007-1012 (1986)
   PUBMED   3519573
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015693.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03748.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Sphingomonas folli"
                     /db_xref="taxon:2862497"
     Protein         1..165
                     /product="flagellar basal body-associated FliL family
                     protein"
                     /GO_component="GO:0009425 - bacterial-type flagellum basal
                     body [Evidence IEA]"
                     /GO_process="GO:0006935 - chemotaxis [Evidence IEA]"
                     /GO_process="GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /calculated_mol_wt=17493
     Region          8..165
                     /region_name="fliL"
                     /note="flagellar basal body-associated protein FliL;
                     Reviewed; cl00681"
                     /db_xref="CDD:469875"
ORIGIN      
        1 mrfdrsrgaa avtttprdeq rrvllaviig laallvvggg lalagvwpfg gagdatehps
       61 gqaasaryvd vppmvvtlrs adgrqhflkl hfvivaadpa qvgrigsamp lildtlqsfl
      121 relrpedlgg saavfrvkee ilvrlrdvlg hdgvsevliq dlieq
//
LOCUS       WP_258046446             432 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Sphingomonas folli].
ACCESSION   WP_258046446
VERSION     WP_258046446.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas folli
  ORGANISM  Sphingomonas folli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 432)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 432)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 432)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 432)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Sphingomonas folli"
                     /db_xref="taxon:2862497"
     Protein         1..432
                     /product="ATP-binding protein"
                     /calculated_mol_wt=46085
     Region          34..425
                     /region_name="ActS_PrrB_HisK"
                     /note="ActS/PrrB/RegB family redox-sensitive histidine
                     kinase; NF033792"
                     /db_xref="CDD:468186"
ORIGIN      
        1 mphlanmlgp larggpggrn vrllallrwl aaagqlatil lvhfvvgvhl plvpmlgala
       61 vlvalnvavn qvverrpitn aalfatllvd vaclttqlyl sggvsnpfvt lfllqvviaa
      121 lllrgwtswa mvvitstlfa wlawaappfp lprfwasels ipyvaaswfn ftltatllal
      181 fvtrivrnvs ehdarlaalr qraaeeehiv rmgllasgaa helgtplssi avmlgdwrre
      241 paiarspall adlddmraev trckdilgqv llasgevrgn apvrttlrtf lagivdswne
      301 skgptaayeh lmtsdpriva dkalaqtitn lldnaveaga ktitlcawwd gdrlvlavrd
      361 dgagfpqsil dglgkpylst karrgaglgl flavnvlrtl ggtvsarnre rggsevtltl
      421 plaaisipee ap
//
LOCUS       WP_258046471             361 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Sphingomonas folli].
ACCESSION   WP_258046471
VERSION     WP_258046471.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas folli
  ORGANISM  Sphingomonas folli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 361)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07883.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Sphingomonas folli"
                     /db_xref="taxon:2862497"
     Protein         1..361
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=38466
     Region          32..176
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     Region          276..350
                     /region_name="QdoI"
                     /note="Cupin domain protein related to quercetin
                     dioxygenase [General function prediction only]; COG1917"
                     /db_xref="CDD:441521"
ORIGIN      
        1 mpiatglavv hsdarrfpia aemdvnwtee amkarlvrya dlvpcrtafi dtrtpgstek
       61 enftiigagv sesadqhvhi terhgfniga arqpfgcvns qhshdtaevf vvhsghwrlp
      121 fgpnkedgsi eigpgdvasv pihmfrgfek ldegvgflft vlgeddpgkv twapavfeaa
      181 sghglklakg grlidtsrge ytledvelae atgvdaasel ktppmdkmre cvaaaedmia
      241 npasplaseg veeagvitpi atgdgfpagp iagwwphgfn lrrltmttga fvplharaev
      301 evlfvhegtl evswdqgaii mgagdtlsvp vhlphsfrnt asvdmkafvv rggdspgmpi
      361 f
//
LOCUS       WP_258046641             451 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Sphingomonas folli].
ACCESSION   WP_258046641
VERSION     WP_258046641.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas folli
  ORGANISM  Sphingomonas folli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 451)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Sphingomonas folli"
                     /db_xref="taxon:2862497"
     Protein         1..451
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=47827
     Region          232..450
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(235,238..239,241..242,245,248..249,252,255..256,
                     259..260,263,266..267,269..270,274,276..277,280,283..284,
                     287..288,291,294,297..298,301,305,308,315,319,322,
                     325..326,329,332..333,336..337,339..340,343..344,354,
                     357..358,361,364..365,367..368,371..372,375,378..379,382,
                     385..386,388..389,392..393,395..396,399,402..403,406,
                     409..410)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            297..330
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 mphdlppigs vaatfdltar frvfdvdgrl tqasrdvwea laprvreiah ayweqwqrcf
       61 adrrswathe termidlgct flenrflrtr erawiesier svagayaadv tpmallsmis
      121 asdraaldvl matvarddpr lpelvdtlmr lsalegeitv emyasyrehr aqvardrlaa
      181 efrdgiavtv edttregdnl raqashassa argmlgktse vaaaaeqsav amrdaastaa
      241 gliraiedar aevevaadia traagqagda vnvsgalsdh aksiesilgl irdiagqtnl
      301 lalnatieaa ragdagrgfa vvaqevksla sqtaratddi aakiaaiqaa trvtvdtsas
      361 irttvaevqd satrirhame sqaqtvtait aavdetalaa dsmshtiaai redtetvate
      421 idrlgagfds lagrlgaldg hagdfaskva a
//
LOCUS       WP_258046662            1134 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase 2 galactose-binding domain-containing protein
            [Sphingomonas folli].
ACCESSION   WP_258046662
VERSION     WP_258046662.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas folli
  ORGANISM  Sphingomonas folli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 1134)
  AUTHORS   Skalova,T., Dohnalek,J., Spiwok,V., Lipovova,P., Vondrackova,E.,
            Petrokova,H., Duskova,J., Strnad,H., Kralova,B. and Hasek,J.
  TITLE     Cold-active beta-galactosidase from Arthrobacter sp. C2-2 forms
            compact 660 kDa hexamers: crystal structure at 1.9A resolution
  JOURNAL   J Mol Biol 353 (2), 282-294 (2005)
   PUBMED   16171818
REFERENCE   2  (residues 1 to 1134)
  AUTHORS   Juers,D.H., Hakda,S., Matthews,B.W. and Huber,R.E.
  TITLE     Structural basis for the altered activity of Gly794 variants of
            Escherichia coli beta-galactosidase
  JOURNAL   Biochemistry 42 (46), 13505-13511 (2003)
   PUBMED   14621996
REFERENCE   3  (residues 1 to 1134)
  AUTHORS   Juers,D.H., Heightman,T.D., Vasella,A., McCarter,J.D.,
            Mackenzie,L., Withers,S.G. and Matthews,B.W.
  TITLE     A structural view of the action of Escherichia coli (lacZ)
            beta-galactosidase
  JOURNAL   Biochemistry 40 (49), 14781-14794 (2001)
   PUBMED   11732897
REFERENCE   4  (residues 1 to 1134)
  AUTHORS   Juers,D.H., Jacobson,R.H., Wigley,D., Zhang,X.J., Huber,R.E.,
            Tronrud,D.E. and Matthews,B.W.
  TITLE     High resolution refinement of beta-galactosidase in a new crystal
            form reveals multiple metal-binding sites and provides a structural
            basis for alpha-complementation
  JOURNAL   Protein Sci 9 (9), 1685-1699 (2000)
   PUBMED   11045615
REFERENCE   5  (residues 1 to 1134)
  AUTHORS   Jain,S., Drendel,W.B., Chen,Z.W., Mathews,F.S., Sly,W.S. and
            Grubb,J.H.
  TITLE     Structure of human beta-glucuronidase reveals candidate lysosomal
            targeting and active-site motifs
  JOURNAL   Nat Struct Biol 3 (4), 375-381 (1996)
   PUBMED   8599764
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046887.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22666.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1134
                     /organism="Sphingomonas folli"
                     /db_xref="taxon:2862497"
     Protein         1..1134
                     /product="glycosyl hydrolase 2 galactose-binding
                     domain-containing protein"
                     /calculated_mol_wt=121718
     Region          56..165
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          255..>770
                     /region_name="LacZ"
                     /note="Beta-galactosidase/beta-glucuronidase [Carbohydrate
                     transport and metabolism]; COG3250"
                     /db_xref="CDD:442481"
     Region          1021..1126
                     /region_name="Ig_GlcNase"
                     /note="Exo-beta-D-glucosaminidase Ig-fold domain;
                     pfam18368"
                     /db_xref="CDD:465727"
ORIGIN      
        1 mrraawllag tglalgagma aradvpgngg pynvrslagg igierplara dalvaagapy
       61 tlsawvrpds rqdgavtlia lgaaptqral lldggrlvlr dgeaavrgpa ltpgkwahva
      121 avsdgaratl yvdgrrvstv aarsvavtpv iaiappgaah lggqlvgata esgatdaral
      181 aaaararpdf dtvqmteigv gwpfqksani gltvqqdawt lprsradatt rpvakpvpqr
      241 pvmqptapgh wqlngwqlaa apevtgdgaa lsrpgaarge awrvatvpgt vlqtlvdrgv
      301 ypdpyyglnn lqiperlarq dywyrtrftv ppeaagrrlt lvfgginyas evwangeklg
      361 ttrgafirgq faytpvagen vvavrvsppp hpgipheqsv sagvgenggq laidgptfva
      421 tegwdwipgi rdrntgiwrp velvatgavr igdphvvtdl plprtdsadv yvtvpldnag
      481 aaapvtvrva fggvtverqv taapghseva ftprdfpqlr vadprlwwpn gygephlydv
      541 tyqvsdaagv sdlrrgrfgi revsydlslf dpagalrrvn vqttdgalag tklidvrhaa
      601 ikesprgwae sltaagatsr avtpiaktlp ephltlrvng vriaarggnw gmddamkrvs
      661 ydwlkpffrl qreahmnvir nwmgnndeee ffdladengm mvlndfwqst qnfqvepddp
      721 slflanardt iaryrnhpsi vlwfgrnegv pyptlnegld ravfeldgtr wftgssnvvn
      781 lqgsgpynyr ppvgyftdla tgfsvetgtp slstaesias yvpaadrwpl gdvlayhdwh
      841 vsgngdtktf tatlermfga gtsfadferk aqmmnlethk amyegflghl wtknsgrllw
      901 mthpawpsna wqiyswdydt haayygakka teplhvqlnl pgnelvvlnt tqaaatglta
      961 rvrvlgldna elfaredrld aaanaattla avpldrlfaa hpmvlvklvl adaagktlse
     1021 nlywrgrdea syraldelap valassaera segedrvvrv tlanegavpa lnakltlvda
     1081 agkrvlpayy ddnyvallpg erkviairyp aggaeaaavt lagwnvraak vavk
//
LOCUS       WP_258046800             180 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Sphingomonas folli].
ACCESSION   WP_258046800
VERSION     WP_258046800.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas folli
  ORGANISM  Sphingomonas folli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 180)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07883.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Sphingomonas folli"
                     /db_xref="taxon:2862497"
     Protein         1..180
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=18809
     Region          37..144
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 mlglplatlv gstslgepag aatpatagmv ragsdhdgrp hrigvsatty kavtretgga
       61 lfvveqanqr rggpplhvhh gedelfyvla gdyivqvgdr ryplgagdci lgprgvphaw
      121 afvgagtgrl llsyapagkm eaffnaweql gftpggysqe kdaallrsyg merrgppivl
//
LOCUS       WP_258046900             275 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Sphingomonas folli].
ACCESSION   WP_258046900
VERSION     WP_258046900.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas folli
  ORGANISM  Sphingomonas folli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 275)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 275)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Sphingomonas folli"
                     /db_xref="taxon:2862497"
     Protein         1..275
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=30225
     Region          86..264
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(94,117,146,244,247)
                     /site_type="active"
                     /db_xref="CDD:239945"
     Site            order(94,244,247)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:239945"
     Site            order(94,117,146)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:239945"
ORIGIN      
        1 mrrigkcllg alavtatsgi sgaaspadep vhqssperrt vperdwgpwl gpfrtllvps
       61 lmqdfgeryl yadanrvlgp prtgerrvvf lgdsitdrwd larsfpgkpy vnrgigsqvt
      121 sqlilrfhqd vialrpaavv ilagvndvqg flqqesdeqi esnwealgdl adrhsikvvf
      181 gsllpvngdm paardvlrer dparlrrlna wlrdlcrrrg yayadyyavl vdarglmrpe
      241 mtidgvhplr egyarmapva sgaisqalaa srpas
//
LOCUS       WP_258047008             318 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein, partial [Streptomyces sp.
            SM13].
ACCESSION   WP_258047008
VERSION     WP_258047008.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM13
  ORGANISM  Streptomyces sp. SM13
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 318)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 318)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02770.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Streptomyces sp. SM13"
                     /db_xref="taxon:1983803"
     Protein         <1..318
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
     Region          1..314
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(35,65,67,98,100,296..298,300,302)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 papygrgagp vqqlaiqqel reqgirlsdl svatwvvpsl iaygtdeqre rylpatlrgd
       61 lqwcqlfsep eagsdlaalr travrtdegw ritgqkvwts aartadhgil lartdpdapk
      121 hrgltyflvd mkkargidir plkeitgesl fnevyfddvl lpadavvgev gggwrvarnt
      181 lgnervhmad qmtfdsglea liarsaglde vtgarigala aeahalacig lrttlqqvsg
      241 repgagasvr klvqtlhqqk aaeltlelhg pdgavdepaa ggralhgflm srcltiaggt
      301 tqiqlnvvae rilglprd
//
LOCUS       WP_258047050             213 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Streptomyces sp. SM13].
ACCESSION   WP_258047050
VERSION     WP_258047050.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM13
  ORGANISM  Streptomyces sp. SM13
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Streptomyces sp. SM13"
                     /db_xref="taxon:1983803"
     Protein         1..213
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=21364
     Region          <35..93
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Region          <132..213
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mpgspdprlr qprgrrdpgv rhglgrvhrq pgrhslavrf ggdaptltsa lttsghhtgi
       61 aagslvagra lgsslgltgp alvgavfaal tllplialal rgttgpsriv ahhttdtaae
      121 paatatatat teygssgvri navcpgtist pmvdamvegg eldrdqaegg qgqaidrlgt
      181 aeeiaqavlw lcndgasyvt gvalpvdggy iaq
//
LOCUS       WP_258047079             772 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Streptomyces sp.
            SM13].
ACCESSION   WP_258047079
VERSION     WP_258047079.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM13
  ORGANISM  Streptomyces sp. SM13
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 772)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Streptomyces sp. SM13"
                     /db_xref="taxon:1983803"
     Protein         <1..772
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..>180
                     /region_name="EntF"
                     /note="seryl-AMP synthase component of non-ribosomal
                     peptide synthetase [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG1020"
                     /db_xref="CDD:440643"
     Region          <188..307
                     /region_name="PRK12316"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237054"
     Region          236..293
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; pfam00550"
                     /db_xref="CDD:425746"
     Region          313..747
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 gvtlfatlct awqlvlrrrs gqdafllgtt fgrrrpetad avgfhvallp lplsatdetp
       61 paqavrntgr alfaadehsg vdldallaav rpdpgnprpl vtvsvdldra alagielpgl
      121 rteevtagte saplelalma tqrrdgglrl rlrhdadlfd aataegylae ldeqldalta
      181 pradvpadrk adpktdtsad pqaggsaapq vgtaadpgtd qqvaaapgaa ttaallqevw
      241 esvldvrdap adgnffdlgg nsiaairlvn rvrdtlgvdy pladffadat lramteqlag
      301 edplaaeaav vdrapvsdqq armiaghhim pdpavwnvpt ritftgaldp aalrsavsev
      361 iarhdalrtr ftqegapdgp wwqevlaaep vplpvedltg lpaaerrpra dalcradaaa
      421 pfdlgrslrp rlrllrveed rwelmfvlhh vcadgwslsv llaeiaalyt aaaagvphgl
      481 pdpamqapgy arwqrehhdp gaeaeraafc aryldgvpsa vhvptdrprp qklsghgdtv
      541 rglasgavrk aveelaaerr ttpfavaaaa lgvfltrlsg eedtllsvpy anregtases
      601 lvamtstavm vrvrldsanl descaelavr tgtgalgama hvlptarimq amrdagavsv
      661 pdrvphvlaf qnsvdtdiei pglrvevadl applsrselc fglaprrdat kgyrtflefs
      721 tdlwnhstah dllasytdll aefcarpdrp vrellaepps qslpntgkad av
//
LOCUS       WP_258047102             346 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Streptomyces sp.
            SM13].
ACCESSION   WP_258047102
VERSION     WP_258047102.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM13
  ORGANISM  Streptomyces sp. SM13
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 346)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Streptomyces sp. SM13"
                     /db_xref="taxon:1983803"
     Protein         1..346
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=36602
     Region          3..260
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(97,104,107..108,110..111,114,122,124,126,171,
                     205..206,225..226,232..233,235..236,254)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176106"
     Site            order(98,148,195..196,203)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:176106"
ORIGIN      
        1 melrhlkafl avaeelhfgr aakrlqmaqp plsqqirqle relgvqlfrr ntrsvrltga
       61 getfldpvrt vlddldtavr aarsagrgey grvtigfaga sshetlprlt ravraahpgl
      121 elvmtgqtya nvalsrvadg sldlgfvrlp vtrpgvahrv ideeellcal pfdhplarha
      181 avplaelade pfvsfpantg stvrdamtea cesagftprv vqeapdsyti malvaagvgv
      241 tltvtsvrhi qqsgltyrpl agppirrqaa lawradnpsa alravlavaq dalptpvrgp
      301 rgepietpgl svgdtsgigp aqspdakvts apaaprtppp aprpsp
//
LOCUS       WP_258047187             332 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Streptomyces sp.
            SM13].
ACCESSION   WP_258047187
VERSION     WP_258047187.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM13
  ORGANISM  Streptomyces sp. SM13
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Streptomyces sp. SM13"
                     /db_xref="taxon:1983803"
     Protein         1..332
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=35370
     Region          <35..239
                     /region_name="YrhO"
                     /note="Sugar-specific transcriptional regulator TrmB
                     [Transcription]; COG1378"
                     /db_xref="CDD:440988"
     Region          245..317
                     /region_name="GerE"
                     /note="Spore transcriptional regulator GerE (stand-alone
                     HTH domain) [Cell cycle control, cell division, chromosome
                     partitioning, Transcription]; COG5905"
                     /db_xref="CDD:444607"
ORIGIN      
        1 mgesrppelc ergleryrda laagavtadq apdclvglgl lrslpddpgs ltpvppdlaa
       61 aslsrpikra imgheetlma irdtmagvqa vyaesqqggs tsvqvlsgas eigaaleeav
      121 qscreellta qpnggrspel laealprdla laargvkqrt lyqhtvrahg ptlsyiervv
      181 aagaevrtld evferlivcd nrtafvpgpy drsqsalvir hpsiidylik gfeqawgraa
      241 avgeapsrlr pppltnetrr avlrlmvegy tdeaiagrlg isrrtvgthv qktsevlgsr
      301 sraqlaylia qtdlldhsdl daadasevgt ai
//
LOCUS       WP_258047207             202 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6518 family protein [Streptomyces sp. SM13].
ACCESSION   WP_258047207
VERSION     WP_258047207.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM13
  ORGANISM  Streptomyces sp. SM13
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040123.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20128.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Streptomyces sp. SM13"
                     /db_xref="taxon:1983803"
     Protein         1..202
                     /product="DUF6518 family protein"
                     /calculated_mol_wt=20786
     Region          4..199
                     /region_name="DUF6518"
                     /note="Family of unknown function (DUF6518); pfam20128"
                     /db_xref="CDD:466296"
ORIGIN      
        1 mknvpgasal clgaglvggi ltnllqgwlp gawnnlansg avwttlafaa givlasrtdd
       61 hrvlaaagal aeiglvvgyy gyaefgrdgm gsltfplvwl tmacvagplf giagawsrra
      121 tqpwrryval galgglfgse glhywlglgy apqavacgaf acglplllgr twkerglsla
      181 vaipasflty qilygllnav sg
//
LOCUS       WP_258046947             319 aa            linear   BCT 02-MAR-2025
DEFINITION  Ada metal-binding domain-containing protein [Sphingomonas folli].
ACCESSION   WP_258046947
VERSION     WP_258046947.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas folli
  ORGANISM  Sphingomonas folli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 319)
  AUTHORS   Sakashita,H., Sakuma,T., Ohkubo,T., Kainosho,M., Sakumi,K.,
            Sekiguchi,M. and Morikawa,K.
  TITLE     Folding topology and DNA binding of the N-terminal fragment of Ada
            protein
  JOURNAL   FEBS Lett 323 (3), 252-256 (1993)
   PUBMED   8500619
REFERENCE   2  (residues 1 to 319)
  AUTHORS   Myers,L.C., Terranova,M.P., Nash,H.M., Markus,M.A. and Verdine,G.L.
  TITLE     Zinc binding by the methylation signaling domain of the Escherichia
            coli Ada protein
  JOURNAL   Biochemistry 31 (19), 4541-4547 (1992)
   PUBMED   1581309
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014821.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02805.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Sphingomonas folli"
                     /db_xref="taxon:2862497"
     Protein         1..319
                     /product="Ada metal-binding domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006281 - DNA repair [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=33420
     Region          48..>319
                     /region_name="AdaA"
                     /note="Methylphosphotriester-DNA--protein-cysteine
                     methyltransferase (N-terminal fragment of Ada), contains
                     Zn-binding and two AraC-type DNA-binding domains
                     [Replication, recombination and repair]; COG2169"
                     /db_xref="CDD:441772"
ORIGIN      
        1 mahsspssra wsgihpsahp aadehaaqri pgqarddgks isgrtsddts idpetawdaf
       61 srrdraydgr fvvtvsstri ycrpscaarr prrehvgfla dgaaaraagy racrrclpdd
      121 vardaaavsr alalldraer tpsladlaaa vgyaphhfqr lftrvaglsp aayardrraa
      181 raaaalreeg hvtaaiyaag yaapsrfyad aaalgmapaa wasggagerv awyvvptplg
      241 allvaqtgrg lchvglderv ealaallpaa llvaadager sralrwveaa avprdaaltg
      301 aqrralflaa vratarada
//
LOCUS       WP_258047210             347 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Streptomyces sp.
            SM13].
ACCESSION   WP_258047210
VERSION     WP_258047210.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM13
  ORGANISM  Streptomyces sp. SM13
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 347)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Streptomyces sp. SM13"
                     /db_xref="taxon:1983803"
     Protein         <1..347
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <3..238
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
     Region          268..339
                     /region_name="AcpP"
                     /note="Acyl carrier protein [Lipid transport and
                     metabolism]; COG0236"
                     /db_xref="CDD:440006"
ORIGIN      
        1 ggvgfwrgfl rgvpvesgvp ldrvrpdvpv vrgerfvrrw sggrhagvrg largvgssvy
       61 mvvhaalvav laesgagsdv vvgcpvstrr gegleevvgf fvntvalrcd vgggvsfgel
      121 lvrvrdadla afdrgdvpfn rvveavnppr hpsrnplfqv llaqqhhtrl vpdlggeavs
      181 mpfpvasgea afdlaiafse lpgggmeltv efgsevldrs tveavvdgme rlldgavage
      241 erviraverv psvservsea esavvageet vavlrrlyse vldqpevrde dsffdlgghs
      301 ltamrliarv kehfgvrvpv rtlmkkprlm slageiesra hgdvkhg
//
LOCUS       WP_258047085              91 aa            linear   BCT 02-MAR-2025
DEFINITION  RcpC/CpaB family pilus assembly protein, partial [Streptomyces sp.
            SM13].
ACCESSION   WP_258047085
VERSION     WP_258047085.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM13
  ORGANISM  Streptomyces sp. SM13
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 91)
  AUTHORS   Tomich,M., Planet,P.J. and Figurski,D.H.
  TITLE     The tad locus: postcards from the widespread colonization island
  JOURNAL   Nat Rev Microbiol 5 (5), 363-375 (2007)
   PUBMED   17435791
REFERENCE   2  (residues 1 to 91)
  AUTHORS   Iyer,L.M. and Aravind,L.
  TITLE     The emergence of catalytic and structural diversity within the
            beta-clip fold
  JOURNAL   Proteins 55 (4), 977-991 (2004)
   PUBMED   15146494
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028286.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16976.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Streptomyces sp. SM13"
                     /db_xref="taxon:1983803"
     Protein         <1..91
                     /product="RcpC/CpaB family pilus assembly protein"
ORIGIN      
        1 petvrllrpg drvdviaiga agddgarvva rgarvarvph aaagpgghaa ggggeagtga
       61 lvvlsverst attllgagas grlavavsda n
//
LOCUS       WP_258047235             172 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphatase PAP2 family protein [Streptomyces sp. SM13].
ACCESSION   WP_258047235
VERSION     WP_258047235.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM13
  ORGANISM  Streptomyces sp. SM13
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Neuwald,A.F.
  TITLE     An unexpected structural relationship between integral membrane
            phosphatases and soluble haloperoxidases
  JOURNAL   Protein Sci 6 (8), 1764-1767 (1997)
   PUBMED   9260289
REFERENCE   2  (residues 1 to 172)
  AUTHORS   Stukey,J. and Carman,G.M.
  TITLE     Identification of a novel phosphatase sequence motif
  JOURNAL   Protein Sci 6 (2), 469-472 (1997)
   PUBMED   9041652
REFERENCE   3  (residues 1 to 172)
  AUTHORS   Messerschmidt,A. and Wever,R.
  TITLE     X-ray structure of a vanadium-containing enzyme: chloroperoxidase
            from the fungus Curvularia inaequalis
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 392-396 (1996)
   PUBMED   8552646
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013718.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01569.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Streptomyces sp. SM13"
                     /db_xref="taxon:1983803"
     Protein         1..172
                     /product="phosphatase PAP2 family protein"
                     /calculated_mol_wt=17745
ORIGIN      
        1 mailliigwh stgsleglaw gllaalfcgg ipfaiillgv rrgswtdkhv kvrsqravpl
       61 tatmvsvlvg iliqvvfdap relfalviam lvglaatmvv tvwwkvsvht avaggvatil
      121 alafgpplaa lalvvaaigw srvqlrdhtv aqtivgallg gvaaavtfgl lr
//
LOCUS       WP_258047247             187 aa            linear   BCT 02-MAR-2025
DEFINITION  thioesterase family protein [Streptomyces sp. SM13].
ACCESSION   WP_258047247
VERSION     WP_258047247.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM13
  ORGANISM  Streptomyces sp. SM13
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 187)
  AUTHORS   Dillon,S.C. and Bateman,A.
  TITLE     The Hotdog fold: wrapping up a superfamily of thioesterases and
            dehydratases
  JOURNAL   BMC Bioinformatics 5, 109 (2004)
   PUBMED   15307895
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024675.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13279.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Streptomyces sp. SM13"
                     /db_xref="taxon:1983803"
     Protein         1..187
                     /product="thioesterase family protein"
                     /calculated_mol_wt=20540
     Region          <21..180
                     /region_name="PRK07531"
                     /note="carnitine 3-dehydrogenase"
                     /db_xref="CDD:236044"
ORIGIN      
        1 msehtrsedt dhvdthpedd tvqdttnglp lsrstvrpew idynghmsea fyvlvfgyat
       61 dammietglh agyrestgcs lytveshlry lrdvaegahl vvrtrllgad akkarfchel
      121 yvvdapdgvp epeavpvats ellalhvdqr agrtapfpdp vrerltalve papewagrsi
      181 aevsaar
//
LOCUS       WP_258047259             332 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Streptomyces
            sp. SM13].
ACCESSION   WP_258047259
VERSION     WP_258047259.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM13
  ORGANISM  Streptomyces sp. SM13
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 332)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Streptomyces sp. SM13"
                     /db_xref="taxon:1983803"
     Protein         1..332
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=34738
     Region          1..250
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(7,9..10,12,31..33,61..63,96..98,130,134,154..157)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(75,98,130,134)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mrllmlggte fvgravtdaa lergwdvtvf hrgrhapppg vraltgdwta gpaglvalta
       61 ggpdwdlvvd twsgapsavr daarllcgra ghfsyvssrs vyaypaaagl dedgplvaga
      121 spddggdvpy drakrggela aldafgdral laragliigp genigrlpww lsriarggpv
      181 iapgppgtel qyidardlae wllgaaangl hgayntvsrp ghatmgellt acvratgsga
      241 elrwtdpeal laagvepwsd lpvwlppgel ydtlhrgdht kayaaglrcr pvgetvadtw
      301 awlrtlggia prrpdrpavg ldprleakll al
//
LOCUS       WP_258047303             221 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Streptomyces sp. SM13].
ACCESSION   WP_258047303
VERSION     WP_258047303.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM13
  ORGANISM  Streptomyces sp. SM13
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Streptomyces sp. SM13"
                     /db_xref="taxon:1983803"
     Protein         1..221
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=22066
     Region          12..>210
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mirkvwplal aavsltatvs miglgvttft aayavagpll sgrltrgsta rallialglf
       61 nlgnlvttia pgievflasr vvggvgagil tavatataaa mvadhergra mslvtfglsa
      121 gtvagvpvgm iigrnagwrw tmalvvligv vsmaalafrg ktlprldaaa ggsaftvlrs
      181 srtsvgivaa fllgvaglgl ytyllpmaed rglgglgfal v
//
LOCUS       WP_258047304              58 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6131 family protein [Streptomyces sp. SM13].
ACCESSION   WP_258047304
VERSION     WP_258047304.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM13
  ORGANISM  Streptomyces sp. SM13
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040003.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19626.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..58
                     /organism="Streptomyces sp. SM13"
                     /db_xref="taxon:1983803"
     Protein         1..58
                     /product="DUF6131 family protein"
                     /calculated_mol_wt=5861
ORIGIN      
        1 msmiggtmii lglilliigv iagigvlwti giilvaigav lwalgalgha vggrrhyw
//
LOCUS       WP_258047345             137 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5959 family protein [Streptomyces sp. SM13].
ACCESSION   WP_258047345
VERSION     WP_258047345.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM13
  ORGANISM  Streptomyces sp. SM13
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040274.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19384.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Streptomyces sp. SM13"
                     /db_xref="taxon:1983803"
     Protein         1..137
                     /product="DUF5959 family protein"
                     /calculated_mol_wt=14793
     Region          8..137
                     /region_name="DUF5959"
                     /note="Family of unknown function (DUF5959); pfam19384"
                     /db_xref="CDD:466063"
ORIGIN      
        1 middahalel frfadgvqsv tlrvacdapm aageeryyaa eivlesgfvs gtvglhisgg
       61 dldawdrcld aldaeegaew ppgdrrawls vvpedpmevt vhdspstqia vqvpvdvapg
      121 wleenrlrle hvrkava
//
LOCUS       WP_258047367             607 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Streptomyces sp. SM13].
ACCESSION   WP_258047367
VERSION     WP_258047367.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM13
  ORGANISM  Streptomyces sp. SM13
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Streptomyces sp. SM13"
                     /db_xref="taxon:1983803"
     Protein         1..607
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=62900
     Region          19..402
                     /region_name="MFS_MMR_MDR_like"
                     /note="Methylenomycin A resistance protein (also called
                     MMR peptide) and similar multidrug resistance (MDR)
                     transporters of the Major Facilitator Superfamily;
                     cd17321"
                     /db_xref="CDD:340879"
     Site            order(26..27,30..31,34,66,116..117,119..121,124,144,
                     147..148,151,276,279..280,283..285,288,316,320,373..374,
                     378,382,398,401..402)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340879"
     Region          <406..526
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 msatdttssr qarivliitv vasallvidi tivsvalpei qsdlggslaa lqwiiigytv
       61 tfgafqqaag slsdrlgrrs mfmggialft lssltcgiap nvialdaarc vqgvgaafvl
      121 anampliaqv ydgqarnmai avwgttlgac gavapviggl lvdltewryl flinvpigav
      181 alflcrsrlp adpprsslag idwtgagllv ltlglvnfal trgedqgwgs aatlvqlgvs
      241 avlltgflil errvpsptld lalfkvptfv aaaliaffsr fatiggsvyy ilyfqsargl
      301 splqtglmmm avfapqlgmg lvagklqaky spshiigagf gilalgglam swsfdldqai
      361 waalpglllw gvggglagsp smslavnvvp keragmasga vnrgvkpace qavreatsdt
      421 afvvhpgliv gpgddvgpfg ywplrmargr atavpaadda ddavlpaqcv dvrdlaswiv
      481 draaartsgv ydaagppasl esllqevada vghsglelvp vpervlreag vrpwsgrpsm
      541 plwpprelyg alsrdvmssf eaglrirpva etaeavlrdr lgrgagtppv agltpveeas
      601 llrlaga
//
LOCUS       WP_258047378             329 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Streptomyces sp. SM13].
ACCESSION   WP_258047378
VERSION     WP_258047378.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM13
  ORGANISM  Streptomyces sp. SM13
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Streptomyces sp. SM13"
                     /db_xref="taxon:1983803"
     Protein         1..329
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=35604
     Region          33..305
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mtfispglva gsfallfasg cqsspaetad ekpitigtss vpagldpagv ydagswavft
       61 nicqnlltfe pgsptpkpda aescaftsaa lttyrcelrd gltfsngnpl tataversfe
      121 rilrirdplg pgplfadlls vdakgslvtf hlatadatwp ypeadpvyaa erprsagdtt
      181 pvrirlghqt giaavearel keqwekdglf rvelveerdf ttyqkrcqkg efdvnlyqwt
      241 pdfpdadtfv qplvgtgnvl gngytsaevd hairdtqrft drgkamqrfr avqdtiakda
      301 plipvrhrqr qvvgrstvlg ghllaedai
//
LOCUS       WP_258047401             179 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6328 family protein [Streptomyces sp. SM13].
ACCESSION   WP_258047401
VERSION     WP_258047401.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. SM13
  ORGANISM  Streptomyces sp. SM13
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 179)
  AUTHORS   Ramos,A., Lombo,F., Brana,A.F., Rohr,J., Mendez,C. and Salas,J.A.
  TITLE     Biosynthesis of elloramycin in Streptomyces olivaceus requires
            glycosylation by enzymes encoded outside the aglycon cluster
  JOURNAL   Microbiology (Reading) 154 (Pt 3), 781-788 (2008)
   PUBMED   18310024
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039409.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19853.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Streptomyces sp. SM13"
                     /db_xref="taxon:1983803"
     Protein         1..179
                     /product="DUF6328 family protein"
                     /calculated_mol_wt=19765
     Region          9..148
                     /region_name="DUF6328"
                     /note="Family of unknown function (DUF6328); pfam19853"
                     /db_xref="CDD:466208"
ORIGIN      
        1 mtfsrgrqet qeeradrqws ellqelrvaq tgvqilfgfl lavvfqsrfe dlgdtdrtiy
       61 vitvmlgsat aasligpvsy hrlltgrrmk petviwasrm tvlglvllfc tmcsalllil
      121 rvalhnqlal wlvgamalwf lacwfvfpvw alargsaarg ededdgagda spdrrsgas
//
LOCUS       WP_258047439             143 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_258047439
VERSION     WP_258047439.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>143
                     /product="DUF6531 domain-containing protein"
     Region          1..>143
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
ORIGIN      
        1 msgkpaarqg dmtqyggpiv qgsagvriga ptgvacsvcp ggmtsgnpvn pllgakvqpg
       61 etdlalpdpl pfilsrtyss yrtktpapvg ifgpgwkaps dirlqlrddg lilndnggrs
      121 ihfepllpge avysrrgstw lgr
//
LOCUS       WP_258047416             226 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: transposase [Streptomyces].
ACCESSION   WP_258047416
VERSION     WP_258047416.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13751.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..226
                     /product="transposase"
                     /calculated_mol_wt=24881
     Region          <22..213
                     /region_name="transpos_IS1182"
                     /note="IS1182 family transposase; NF033551"
                     /db_xref="CDD:468080"
ORIGIN      
        1 mwppprpppt tarscpastp lrqrgllpse hlvdsgytsl vpleqaardh qvtvtgplpa
       61 nptrqhrqge gfarddfhid ydhqqvtcpq gqvsrgwhcp nptssptaap livakfskgq
      121 cqpcpartqc ttardsvrtv gfpprelrdl qlrvrtgqqt pewkiryamr sgvegtvnef
      181 ahshamrrcr yrgqskahiq hvltaiavni erlsglpsae ggsppr
//
LOCUS       WP_258047456             244 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase, partial [Escherichia coli].
ACCESSION   WP_258047456
VERSION     WP_258047456.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 244)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 244)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>244
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          10..>244
                     /region_name="PRK10939"
                     /note="autoinducer-2 (AI-2) kinase; Provisional"
                     /db_xref="CDD:182853"
ORIGIN      
        1 marlftpses kyylmaldag tgsiravifd legnqiavgq aewrhlavpd vpgsmefdln
       61 knwqlacecm rqalhnagia peyiaavsac smregivlyn negapiwaca nvdaraarev
      121 selkelhnnt fenevyratg qtlalsaipr llwlahhrsd iyrqastitm isdwlaymls
      181 gelavdpsna gttglldltt rdwkpalldm aglradilsp vketgtllgv vssqaaelcg
      241 lkag
//
LOCUS       WP_258047481             215 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein, partial [Escherichia coli].
ACCESSION   WP_258047481
VERSION     WP_258047481.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 215)
  AUTHORS   Wang,J., Hofnung,M. and Charbit,A.
  TITLE     The C-terminal portion of the tail fiber protein of bacteriophage
            lambda is responsible for binding to LamB, its receptor at the
            surface of Escherichia coli K-12
  JOURNAL   J Bacteriol 182 (2), 508-512 (2000)
   PUBMED   10629200
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024939.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13550.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>215
                     /product="phage tail protein"
     Region          <1..>215
                     /region_name="COG4733"
                     /note="Phage-related protein, tail protein J [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443767"
ORIGIN      
        1 rpsdvvwpyt nsdvvvddng vgfrysfsal kdrhtavevn ytdpqngwqt stelvedsda
       61 ilrygrnllk mdafgctsrg qahraglwvi ktelletqtv dftlgsqglr htpgdiieic
      121 dndyagtltg grilsidaas rtltldrevt lpetgtstvn lingsgkpvr vditahpapd
      181 riqvsvlpdg vatygvwgls lpslrrrlfr cvsir
//
LOCUS       WP_258047526             915 aa            linear   BCT 02-MAR-2025
DEFINITION  ESPR-type extended signal peptide-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_258047526
VERSION     WP_258047526.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 915)
  AUTHORS   Leyton,D.L., Rossiter,A.E. and Henderson,I.R.
  TITLE     From self sufficiency to dependence: mechanisms and factors
            important for autotransporter biogenesis
  JOURNAL   Nat Rev Microbiol 10 (3), 213-225 (2012)
   PUBMED   22337167
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 915)
  AUTHORS   Desvaux,M., Scott-Tucker,A., Turner,S.M., Cooper,L.M., Huber,D.,
            Nataro,J.P. and Henderson,I.R.
  TITLE     A conserved extended signal peptide region directs
            posttranslational protein translocation via a novel mechanism
  JOURNAL   Microbiology (Reading) 153 (Pt 1), 59-70 (2007)
   PUBMED   17185535
REFERENCE   3  (residues 1 to 915)
  AUTHORS   Desvaux,M., Cooper,L.M., Filenko,N.A., Scott-Tucker,A.,
            Turner,S.M., Cole,J.A. and Henderson,I.R.
  TITLE     The unusual extended signal peptide region of the type V secretion
            system is phylogenetically restricted
  JOURNAL   FEMS Microbiol Lett 264 (1), 22-30 (2006)
   PUBMED   17020545
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024418.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13018.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>915
                     /product="ESPR-type extended signal peptide-containing
                     protein"
     Region          1..>915
                     /region_name="PRK14849"
                     /note="autotransporter barrel domain-containing
                     lipoprotein"
                     /db_xref="CDD:184851"
ORIGIN      
        1 mnriyrviwn ctlqvfqacs eltrragkts tvnlrkssgl ttkfsrltlg vllalsgsas
       61 gaslevdndq itnidtdvay daylvgwygt gvlnilaggn aslttittsv iganedsegt
      121 vnvlggtwrl ydsgnnarpl nvgqsgtgtl nikqkghvdg gylrlgsstg gvgtvnvege
      181 dsvlttelfe igsygtgsln itdkgyvtss ivailgyqag sngqvvvekg gewliknnds
      241 siefqignqg tgeatiregg litaentiig gnatgigtln vqdqdsvitv rrlyngyfgn
      301 gtlnisnngl innkeyslvg vqdgshgvvn vtdkghwnfl gtgeafryiy igdagdgeln
      361 vsregkvdsg iitagmketg tgnitvkdkn svitnlgtnl gydghgemni sneglvvsng
      421 gsslgygetg vgnvsittgg mwevnknvyt tigvagvgnl nisdggkfvs qnitflgdka
      481 sgigtlnlmd atssfdtvgi nvgnfgsgiv nvsngatlns tgygfiggna sgkgivnist
      541 dslwnlktss tnaqllqvgv lgkgelnitt ggivkardtq ialndkskgd vrvdgqnsll
      601 etfnmyvgts gtgtltltns gtlnveggev ylgvfepavg tlnigaahge aaadagyitn
      661 atkvefgsge gvfvfnhtnn sdagyqvdml itgddkdgkv ihdaghtvfn agntysgktl
      721 vndglltias htadgvtgmg ssevtiaspg tldilastns agdytltnal kgdglmrvql
      781 sssdkmfgft hatgtefagv aqlkdstftl erdntaalth amlqsdsent tsvkvgeqsi
      841 gglamnggtl ifdtdipaat laegyisvdt lvvgagdytw kgrnyqvngt gdvlidvpkp
      901 wndpmannpl ttlnl
//
LOCUS       WP_258047484             110 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Escherichia coli].
ACCESSION   WP_258047484
VERSION     WP_258047484.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 110)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 110)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>110
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          <1..>103
                     /region_name="vgr_GE"
                     /note="Rhs element Vgr protein; TIGR01646"
                     /db_xref="CDD:273730"
ORIGIN      
        1 rdynyrsata emmteqhdat ggdnttygea yhyadnflqk gdkeaaesga fyarirhery
       61 lneqailqgq stssllmpgl eirvqgddap avfrkgvlit gvtasaardr
//
LOCUS       WP_258047529             470 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein,
            partial [Escherichia coli].
ACCESSION   WP_258047529
VERSION     WP_258047529.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 470)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..470
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
     Region          <1..469
                     /region_name="mrcB"
                     /note="bifunctional glycosyl transferase/transpeptidase;
                     Reviewed; PRK09506"
                     /db_xref="CDD:236544"
ORIGIN      
        1 lvlrppqqqq iihqelydil sarplgvqpr ggvispqpaf mqlvrqelqa klgdkvkdls
       61 gvkifttfds vaqdaaekaa vegipalkkq rklsdletai vvvdrfsgev ramvggsepq
      121 fagynramqa rrsigslakp atyltalsqp kiyrlntwia dapialrqpn gqvwspqndd
      181 rrysesgrvm lvdaltrsmn vptvnlgmal glpavtdtwi klgvpkdqlh pvpamllgal
      241 nltpievaqa fqtiasggnr aplsalrsvi aedgkvlyqs fpqaeravpa qaayltlwtm
      301 qqvvqrgtgr qlgakypnlh lagktgttnn nvdtwfagid gstvtitwvg rdnnqptkly
      361 gasgamsiyq rylanqtptp lnlvppedia dmgvdydgnf vcsggmrvlp vwtsdpqslc
      421 qqsemqqqps gnpfdqssqp qqqpqqqpaq qeqkdsdgva gwikdmfgsn
//
LOCUS       WP_258047563             317 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_258047563
VERSION     WP_258047563.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>317
                     /product="DUF6531 domain-containing protein"
     Region          1..>317
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
ORIGIN      
        1 plpfilsrty ssyrtktpap vgslgpgwkm padirlqlrd ntlilsdngg rslyfehlfp
       61 gedgysrses lwlvrggvlr ldeghrlaal wqalpeelrl sphrylatns pqgpwwllgw
      121 cervpeadev lpaplppyrv ltglvdrfgr tqtfhreaag efsgeitgvt dgagrhfrlv
      181 lttqaqraee arqqaisggt epsafpdtlp gyteygrdng irlsavwlth dpeypenlpa
      241 aplvrygwtp rgelaavydr sntqvrsfty ddkyrgrmva hrhtgrpeir yrydsdgrvt
      301 eqlnpaglsy tyqyekd
//
LOCUS       WP_258047572             217 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase family protein, partial
            [Escherichia coli].
ACCESSION   WP_258047572
VERSION     WP_258047572.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 217)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00725.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..217
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
     Region          <1..211
                     /region_name="fadJ"
                     /note="fatty acid oxidation complex subunit alpha FadJ;
                     PRK11154"
                     /db_xref="CDD:236864"
ORIGIN      
        1 ilapyineai rmltegerve hidaalvkfg fpvgpiqlld evgidtgtki ipvleaayge
       61 rfsapanvvs silnddrkgr kngrgfylyg qkgrkskkqv dpaiypliga qgqgrlsapq
      121 vaercvmlml neavrcvdeq virsvrdgdi gavfgigfpp flggpfryid slgagevvai
      181 mqrlatqygs rftpcerlve mgargesfwk ttatdlq
//
LOCUS       WP_258047579             344 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258047579
VERSION     WP_258047579.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>344
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          4..>344
                     /region_name="ArpD"
                     /note="ABC-type protease/lipase transport system, ATPase
                     and permease components [Intracellular trafficking,
                     secretion, and vesicular transport]; COG4618"
                     /db_xref="CDD:443660"
ORIGIN      
        1 mklrpasprn eilatlgrfr palrsvalft avinllmlap slymlqvydr vlgsgnhmtl
       61 lmltlmvlgl ylllgalewv rslvvirlgg qldmqlnqri ydasfrasle rgeqavgqal
      121 ndltslrqfl tgnalfaffd apwfplyllv iflfspwlgl lalvgalllv llawvnesrs
      181 replaeagql silatqqasa nlrqaetlaa mgmlpamrar wfaqhqafla rqnlgsersa
      241 aigatskgvr lalqslvlgl gawlavegli tpgmmiagsi lmgrvlspid qliavwrqws
      301 garqayqrla rlleenppaa lgmplpaprg alrverlcaa apgr
//
LOCUS       WP_258047584             111 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258047584
VERSION     WP_258047584.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 111)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 111)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>111
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          10..>111
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mtpegrmhgl flgidcgtqg skallldags grtlglgsaa qrppegrdgr reqdpadwle
       61 amasavrmal eeaavdgrev ralavsaqqh glllldaegr alrpaklwcd t
//
LOCUS       WP_258047597             181 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Escherichia coli].
ACCESSION   WP_258047597
VERSION     WP_258047597.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 181)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>181
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          1..>181
                     /region_name="PRK08155"
                     /note="acetolactate synthase large subunit; cl39075"
                     /db_xref="CDD:453955"
ORIGIN      
        1 memlsgaemv vrslidqgvk qvfgypggav ldiydalhtv ggidhvlvrh eqaavhmadg
       61 laratgevgv vlvtsgpgat naitgiatay mdsiplvvls gqvatsligy dafqecdmvg
      121 isrpvvkhsf lvkqtedipq vlkkafwlaa sgrpgpvvvd lpkdilnpan klpyvwpesv
      181 s
//
LOCUS       WP_258047607              47 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6404 family protein, partial [Escherichia coli].
ACCESSION   WP_258047607
VERSION     WP_258047607.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 47)
  AUTHORS   Hejnova,J., Pages,D., Rusniok,C., Glaser,P., Sebo,P. and
            Buchrieser,C.
  TITLE     Specific regions of genome plasticity and genetic diversity of the
            commensal Escherichia coli A0 34/86
  JOURNAL   Int J Med Microbiol 296 (8), 541-546 (2006)
   PUBMED   17049458
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040085.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19942.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..47
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..47
                     /product="DUF6404 family protein"
     Region          <1..46
                     /region_name="DUF6404"
                     /note="Family of unknown function (DUF6404); pfam19942"
                     /db_xref="CDD:437774"
ORIGIN      
        1 iywgpsgmva geaiiisitg gflfglltas fhwwrrkvnr lppwddv
//
LOCUS       WP_258047611             421 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_258047611
VERSION     WP_258047611.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>421
                     /product="DUF6531 domain-containing protein"
     Region          1..>418
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
ORIGIN      
        1 mggkpaarqg dmtrkgldiv qgsagvliga ptgvacsvcp ggityanpvn pllgakvlpg
       61 etdlalpgpl pfilsrayss yrtrtpapvg vfgpgwkapf dirlqirdeg lilndsggrs
      121 ihfeplfpge isysrseslw larggvaaqy ssqplsalwq vlpedvrlsp hvylatnslq
      181 gpwwilswpe rvpgadevlp peppayrvlt gvvdgfgrtl afhraakgdv agavtgvtdg
      241 agrrfhlalt tqaqraeafr kqrasslssp asprsvsssq vfpdtlpagt eygadngirl
      301 eavwlthdpa ypdeqptapl arytytasge lravydrsgt qvrgftydae hagrmvahhy
      361 agrpesryry ddtgrvteqv npegldyrfe ygqdrvtitd slnrrevlyt egegglkrsm
      421 g
//
LOCUS       WP_258047636             155 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258047636
VERSION     WP_258047636.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 155)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 155)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>155
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          1..>155
                     /region_name="VI_Rhs_Vgr"
                     /note="type VI secretion system Vgr family protein;
                     TIGR03361"
                     /db_xref="CDD:274542"
ORIGIN      
        1 felelvgera gldletflhr paflaftpqg qgvhglvyga aqgdagkrlt ryrltlvphl
       61 aylaqrnnqr ifqhltvpqi valvleehgi ladayrfqlg trypereycv qydesdlhfv
      121 qrlcaeegih fhfrhsaeah llvfgddqtv fprlg
//
LOCUS       WP_258047637             184 aa            linear   BCT 02-MAR-2025
DEFINITION  AIR synthase-related protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258047637
VERSION     WP_258047637.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 184)
  AUTHORS   Li,C., Kappock,T.J., Stubbe,J., Weaver,T.M. and Ealick,S.E.
  TITLE     X-ray crystal structure of aminoimidazole ribonucleotide synthetase
            (PurM), from the Escherichia coli purine biosynthetic pathway at
            2.5 A resolution
  JOURNAL   Structure 7 (9), 1155-1166 (1999)
   PUBMED   10508786
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014788.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02769.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..184
                     /product="AIR synthase-related protein"
     Region          <1..179
                     /region_name="PRK05731"
                     /note="thiamine monophosphate kinase; Provisional"
                     /db_xref="CDD:235583"
ORIGIN      
        1 pagqaltrag arpgdllcvg gplgeagaal elvlerrsap aevaepllar ywtpapqfgl
       61 glalrgkasa aldisdglla dcghiarasg vallvecqrl qasaalsgll ageealrqql
      121 aagddyvlvf tlppeylgei raawpamavi grveagqgvh lldadgkeli paaagyqhfg
      181 tqrd
//
LOCUS       WP_258047712              71 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5818 domain-containing protein [Sphingomonas citri].
ACCESSION   WP_258047712
VERSION     WP_258047712.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas citri
  ORGANISM  Sphingomonas citri
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039244.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19135.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Sphingomonas citri"
                     /db_xref="taxon:2862499"
     Protein         1..71
                     /product="DUF5818 domain-containing protein"
                     /calculated_mol_wt=7416
     Region          15..71
                     /region_name="DUF5818"
                     /note="Protein of unknown function (DUF5818); pfam19135"
                     /db_xref="CDD:436999"
ORIGIN      
        1 mgafmampgs pvdetgtlvr eggafilrrd rggtfvlelq rvpvdhiakr vrirgvlida
       61 arvsvdgvaa a
//
LOCUS       WP_258047979             449 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase gpA endonuclease subunit, partial [Escherichia coli].
ACCESSION   WP_258047979
VERSION     WP_258047979.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 449)
  AUTHORS   Ortiz,D., delToro,D., Ordyan,M., Pajak,J., Sippy,J., Catala,A.,
            Oh,C.S., Vu,A., Arya,G., Feiss,M., Smith,D.E. and Catalano,C.E.
  TITLE     Evidence that a catalytic glutamate and an 'Arginine Toggle' act in
            concert to mediate ATP hydrolysis and mechanochemical coupling in a
            viral DNA packaging motor
  JOURNAL   Nucleic Acids Res 47 (3), 1404-1415 (2019)
   PUBMED   30541105
REFERENCE   2  (residues 1 to 449)
  AUTHORS   delToro,D., Ortiz,D., Ordyan,M., Sippy,J., Oh,C.S., Keller,N.,
            Feiss,M., Catalano,C.E. and Smith,D.E.
  TITLE     Walker-A Motif Acts to Coordinate ATP Hydrolysis with Motor Output
            in Viral DNA Packaging
  JOURNAL   J Mol Biol 428 (13), 2709-2729 (2016)
   PUBMED   27139643
REFERENCE   3  (residues 1 to 449)
  AUTHORS   Andrews,B.T. and Catalano,C.E.
  TITLE     The enzymology of a viral genome packaging motor is influenced by
            the assembly state of the motor subunits
  JOURNAL   Biochemistry 51 (46), 9342-9353 (2012)
   PUBMED   23134123
REFERENCE   4  (residues 1 to 449)
  AUTHORS   Ortega,M.E., Gaussier,H. and Catalano,C.E.
  TITLE     The DNA maturation domain of gpA, the DNA packaging motor protein
            of bacteriophage lambda, contains an ATPase site associated with
            endonuclease activity
  JOURNAL   J Mol Biol 373 (4), 851-865 (2007)
   PUBMED   17870092
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042573.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20454.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..449
                     /product="terminase gpA endonuclease subunit"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
     Region          <1..>43
                     /region_name="ZapE"
                     /note="Cell division protein ZapE (Z ring-associated
                     ATPase), AFG1 superfamily [Cell cycle control, cell
                     division, chromosome partitioning]; COG1485"
                     /db_xref="CDD:441094"
     Region          <28..414
                     /region_name="gpA1"
                     /note="Phage terminase, large subunit GpA [Mobilome:
                     prophages, transposons]; COG5525"
                     /db_xref="CDD:444276"
ORIGIN      
        1 fdeffvsdit damllgglmk alfargitlv atsnippdel yrgfhvacph cgeeqylkfg
       61 dketpfglkw tpddpssvfy lcehnacvir qqeldftdar yicektgiwt rdgilwfsss
      121 geeieppdsv tfhiwtaysp fttwvqivkd wmktkgdtgk rktfvnttlg etweakiger
      181 pdaevmaerk ehysapvpdr vayltagids qldryemrvw gwgpgeeswl idrqiimgrh
      241 ddeqtllrvd eainktytrr ngaemsvsri cwdtggidpt ivyerskkhg lfrvipikga
      301 svygkpvasm prkrnkngvy lteigtdtak eqiynrftlt pegdeplpga vhfpnnpdif
      361 dlteaqqlta eeqvekwvdg rkkilwdskk rrnealdcfv yalaalrisi srwqldlsal
      421 laslqeedga atnkktlady aralsgede
//
LOCUS       WP_258047983             186 aa            linear   BCT 02-MAR-2025
DEFINITION  lyase family protein, partial [Escherichia coli].
ACCESSION   WP_258047983
VERSION     WP_258047983.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00206.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>186
                     /product="lyase family protein"
     Region          1..>186
                     /region_name="Lyase_I_like"
                     /note="Lyase class I_like superfamily: contains the lyase
                     class I family, histidine ammonia-lyase and phenylalanine
                     ammonia-lyase, which catalyze similar beta-elimination
                     reactions; cl00013"
                     /db_xref="CDD:469578"
ORIGIN      
        1 mntvrsekds mgaidvpadk lwgaqtqrsl ehfristekm ptslihalal tkraaakvne
       61 dlgllseeka sairqaadev lagqhddefp laiwqtgsgt qsnmnmnevl anrasellgg
      121 vrgmerkvhp nddvnksqss ndvfptamhv aallalrkql ipqlktltqt lseksrafad
      181 ivkigr
//
LOCUS       WP_258048020             316 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein, partial [Escherichia coli].
ACCESSION   WP_258048020
VERSION     WP_258048020.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 316)
  AUTHORS   Wang,J., Hofnung,M. and Charbit,A.
  TITLE     The C-terminal portion of the tail fiber protein of bacteriophage
            lambda is responsible for binding to LamB, its receptor at the
            surface of Escherichia coli K-12
  JOURNAL   J Bacteriol 182 (2), 508-512 (2000)
   PUBMED   10629200
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024939.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13550.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>316
                     /product="phage tail protein"
     Region          <1..>296
                     /region_name="COG4733"
                     /note="Phage-related protein, tail protein J [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443767"
ORIGIN      
        1 wngqtltfvq drpsdkvwty nrsnvvmpdd gapfrysfsa lkdrhnavev nwtdpnngwe
       61 tatelvedtq aiarygrnvt kmdafgctsr gqahraglwl iktelletqt vdfsvgaegl
      121 rhvpgdviei cdddyagisi ggrvlavnsq trtltldrei tlpssgttli slvdgsgnpv
      181 svevqsvtdg vkvkvsrvpd gvaeysvwgl klptlrqrlf rcvsirendd gtyaitavqh
      241 vpekeaivdn gahfdgdqsg tvngvtppav qhltaevtad sgeyqvlarw dtpkvvkggs
      301 fmlrltvaad dgserl
//
LOCUS       WP_258048086              80 aa            linear   BCT 02-MAR-2025
DEFINITION  glutaredoxin domain-containing protein [Sphingomonas citri].
ACCESSION   WP_258048086
VERSION     WP_258048086.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas citri
  ORGANISM  Sphingomonas citri
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012675.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00462.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Sphingomonas citri"
                     /db_xref="taxon:2862499"
     Protein         1..80
                     /product="glutaredoxin domain-containing protein"
                     /GO_function="GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=9002
     Region          17..77
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 mtqqatlyrm vlpdhvcpfg vrakamleqa gfdvddqila trdavdrfeh eqgvettpqv
       61 fiagervggs delerwlqrr
//
LOCUS       WP_258048321             524 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Sphingomonas citri].
ACCESSION   WP_258048321
VERSION     WP_258048321.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas citri
  ORGANISM  Sphingomonas citri
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Sphingomonas citri"
                     /db_xref="taxon:2862499"
     Protein         1..524
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=54646
     Region          90..467
                     /region_name="2A0115"
                     /note="benzoate transport; TIGR00895"
                     /db_xref="CDD:273327"
ORIGIN      
        1 mrstlsdrqa vwafvlgcia vtfgvcahlp mfamarsmhy rlagmpmdsm mlvgmalivl
       61 gtltaaygll prnvaaqrta aadiivappe daalgpahwg lmavlvialv idvmkpaslg
      121 ftvpgmvsey gvpkktvslv pffalagtvv gsvlwgwiad lygrkasill savmfvgtsi
      181 cgampsltwn iamcfmmgaa aggmlpvtya llaemmpsrh rgwslvlvgg lgavggyfaa
      241 sgmsavlqpi fgwrilwlan lptgltlvvl gafipesakf llargrtsea eevmrrfgak
      301 aqragpaqha qkgvsdaltg islygklaal smcalswgli nfglllwlpa dlvaqgysvg
      361 vssrllaesa liafptvfva allysrwstk gallamtait laglllvlrl elagvgspvl
      421 pvallivgtn giiaivlpya aesfplrvra ratgwvaact kgggllaqgl tisgitlsmg
      481 rssllvmvpt alslllvavf gretrgrdlr eldatngpsi sver
//
LOCUS       WP_258048329             232 aa            linear   BCT 02-MAR-2025
DEFINITION  TrbI F-type domain-containing protein [Sphingomonas citri].
ACCESSION   WP_258048329
VERSION     WP_258048329.1
KEYWORDS    RefSeq.
SOURCE      Sphingomonas citri
  ORGANISM  Sphingomonas citri
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (residues 1 to 232)
  AUTHORS   Maneewannakul,S., Maneewannakul,K. and Ippen-Ihler,K.
  TITLE     Characterization, localization, and sequence of F transfer region
            products: the pilus assembly gene product TraW and a new product,
            TrbI
  JOURNAL   J Bacteriol 174 (17), 5567-5574 (1992)
   PUBMED   1355084
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021213.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09677.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Sphingomonas citri"
                     /db_xref="taxon:2862499"
     Protein         1..232
                     /product="TrbI F-type domain-containing protein"
                     /calculated_mol_wt=23212
     Region          56..148
                     /region_name="TrbI_Ftype"
                     /note="Type-F conjugative transfer system protein
                     (TrbI_Ftype); cl11515"
                     /db_xref="CDD:448291"
     Region          <128..>232
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
ORIGIN      
        1 middnemgap iapqpapaap aptpasaaia parravfagy taqqlllgaa llialvwamw
       61 itkavtaekp qhivkanlsk lvgeyvqaqa rsatppeqvq sqmrtfmasl dgelqrrgaa
      121 gqvvlvgeav lsksvpdita evakavyasg vkvpqaaspn qmgamlrgqa piapvaptaa
      181 pspvelaqap tavspdspfg pmpttdagva apapdmaaqg asvstfggpg gq
//
LOCUS       WP_258048440             410 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Mycobacterium
            kansasii].
ACCESSION   WP_258048440
VERSION     WP_258048440.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 410)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         <1..>410
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          7..405
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation domain of nonribosomal
                     peptide synthetases (NRPSs) and similar domains; cd19540"
                     /db_xref="CDD:380463"
ORIGIN      
        1 trcpggrata dvvgrheslr tvfsavagvp qqvvvpverv rlgwrvvdag gwtagrvgqa
       61 vaavvgrcfd lateipvrvq llvvgereyv lvvvvhhiaa dgwsvaalaa dlsvayasrc
      121 ggraprwapl avqyvdytlw qranlgelsd sgsaiaaqlv fwekalagmp erlelptdrp
      181 ypqvadyrgd qvvvvwsael qqrvarvare hrassfmvvq aalsvllsql cassdvavgf
      241 avagrgdpal dglvgffvnt lvlrvhvegd psfaellaqv rarslaafeh qdvpfealve
      301 rlnparslay hpliqvlvaw qnfaggadfa gglrlgdvqv sslpvrthta rmdlvfslae
      361 sftetggpag ingvvefrtd vfdaasieml vkrlervlva vtadpgrrls
//
LOCUS       WP_258048518             207 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase, partial [Mycobacterium kansasii].
ACCESSION   WP_258048518
VERSION     WP_258048518.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 207)
  AUTHORS   Zheng,M., Ginalski,K., Rychlewski,L. and Grishin,N.V.
  TITLE     Protein domain of unknown function DUF1023 is an alpha/beta
            hydrolase
  JOURNAL   Proteins 59 (1), 1-6 (2005)
   PUBMED   15688435
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018018.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06259.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         <1..207
                     /product="alpha/beta hydrolase"
     Region          <19..69
                     /region_name="Abhydrolase_8"
                     /note="Alpha/beta hydrolase; pfam06259"
                     /db_xref="CDD:283837"
ORIGIN      
        1 leaeptpgpf ytgfrtrpaf ansgmranda vligcpgtdl apsaadfhln ggrvyvgaas
       61 tdaiswiaes gsavpnwvnd algaplgpla glgtdpaheg fgsvrfraev agshnvtpwf
      121 ndhshyynkg sealhnmtei avghgnnlag egmlapprae eristptqvh tplgtiplph
      181 veittpvtvd pewdrpgdsv tndhefk
//
LOCUS       WP_258048533             111 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY-family carbohydrate kinase, partial [Mycobacterium kansasii].
ACCESSION   WP_258048533
VERSION     WP_258048533.1
KEYWORDS    RefSeq.
SOURCE      Mycobacterium kansasii
  ORGANISM  Mycobacterium kansasii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (residues 1 to 111)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 111)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02782.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Mycobacterium kansasii"
                     /db_xref="taxon:1768"
     Protein         <1..111
                     /product="FGGY-family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <1..108
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 yqsrdvvdam aadsgvhmev lkvdggitan dlcmqiqadv lgvevvkpvv aettalgaay
       61 aaglavgfwe npddlranwq egkrwtpaws ddqrefayag wqkaldwvdv d
//
LOCUS       WP_258048536             958 aa            linear   BCT 02-MAR-2025
DEFINITION  CDP-glycerol glycerophosphotransferase family protein [Escherichia
            coli].
ACCESSION   WP_258048536
VERSION     WP_258048536.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 958)
  AUTHORS   Fitzgerald,S.N. and Foster,T.J.
  TITLE     Molecular analysis of the tagF gene, encoding
            CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase of
            Staphylococcus epidermidis ATCC 14990
  JOURNAL   J Bacteriol 182 (4), 1046-1052 (2000)
   PUBMED   10648531
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016357.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04464.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..958
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..958
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0047355 - CDP-glycerol
                     glycerophosphotransferase activity [Evidence IEA]"
                     /calculated_mol_wt=111578
     Region          <1..214
                     /region_name="Glyphos_transf"
                     /note="CDP-Glycerol:Poly(glycerophosphate)
                     glycerophosphotransferase; cl42225"
                     /db_xref="CDD:478041"
     Region          240..642
                     /region_name="COG5610"
                     /note="Predicted sugar hydrolase, contains GT1 and HAD
                     domains [General function prediction only]"
                     /db_xref="CDD:444341"
ORIGIN      
        1 mekhfkeqld ltddqmirgg yprciyqsly npivtydhdi isnlglpeet kialyaptyr
       61 eknpknflyl aikdinalsq alernklcli iklhpeisnd fyfktlqnlt iqyrniifwd
      121 nrndiyeiln kvelaivdys siyydlvsag vkkfiryifd yddeqhimay dyksyttgei
      181 cysfeelina idnyqssndn eiakinevfw sysdlntfnn iieqtkkfki gnkgilpsfy
      241 sfdvfdtlia rrclipkgif ykvmenikss denfpdifhh dyvtirmqae sncrellnkt
      301 igqyeitfdd iflrikavyd lndsqikkli eweiqaeyen iipvrnmvek aeqlvhenet
      361 vvlisdmylp keiitnmisl isprlaalpl ylssdkgvqk vsqqlylkvy kdyspwkfkk
      421 wihygdnass dgvkakelgi nshvhaipkl nayetglink irnydaylls glfarmrids
      481 vnekdyfcya hvsgymipyv awcvrnalek gintlyfisr dghflkeiad ayinmhqlsi
      541 ktkyfygsrr awripamidn iddeffsnfg nlvgvdnyek llsaldishn lfqkyfhelg
      601 lnktshinat dlvslrnffs ksekyrgyll erakckreiv idyikqeinp dekyafveyw
      661 argytqtcls kllecafkks secifyyyrs ilpsnennir lnystnnisl ipveaifanc
      721 phetvtgyky ekgkvlpiis rarfdaelyw slgkylklfv kdfyslpfvs nietiernfs
      781 ifsfewyrdh qddpvvvksm ahllysesyl galrefapai tseslallkq gkpvgaftks
      841 ikmslarstp sikkeyqeyl knpkalsakp snakqkvlpt ntskvkikep akinqhlaaq
      901 ssdsrkirll nklernpemf fsdsnkkivr lagktafnpi lkpvlgnvii klskkiih
//
LOCUS       WP_258048721             228 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258048721
VERSION     WP_258048721.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 228)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>228
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          29..>217
                     /region_name="PRK07524"
                     /note="5-guanidino-2-oxopentanoate decarboxylase"
                     /db_xref="CDD:236041"
ORIGIN      
        1 mgaralrrer rlrwspnwtr ilpmqpqktl tagqalvrll anygvdtvfg ipgvhtlely
       61 rglpgsgirh vltrheqgag fmadgyarvs gkpgvcfvit gpgvtnvata igqayadsvp
      121 llvissvnhs aslgkgwgcl hetqdqramt apitafsala lspeqlpeli arayavfdse
      181 rprpvhisip ldvlaapvah dwsaavarrp grgvpcseal raaaerla
//
LOCUS       WP_258048731              64 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258048731
VERSION     WP_258048731.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 64)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..64
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..64
                     /product="PfkB family carbohydrate kinase"
     Region          <1..46
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
ORIGIN      
        1 vvdtvgagdg favgvvsall eglplpdava rgnwigsrav qvrgdmeglp krsqlldrer
       61 rrsa
//
LOCUS       WP_258048932              97 aa            linear   BCT 02-MAR-2025
DEFINITION  RagB/SusD family nutrient uptake outer membrane protein
            [Hymenobacter sp. NBH84].
ACCESSION   WP_258048932
VERSION     WP_258048932.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter sp. NBH84
  ORGANISM  Hymenobacter sp. NBH84
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 97)
  AUTHORS   Goulas,T., Garcia-Ferrer,I., Hutcherson,J.A., Potempa,B.A.,
            Potempa,J., Scott,D.A. and Gomis-Ruth,F.X.
  TITLE     Structure of RagB, a major immunodominant outer-membrane surface
            receptor antigen of Porphyromonas gingivalis
  JOURNAL   Mol Oral Microbiol 31 (6), 472-485 (2016)
   PUBMED   26441291
REFERENCE   2  (residues 1 to 97)
  AUTHORS   Bolam,D.N. and Koropatkin,N.M.
  TITLE     Glycan recognition by the Bacteroidetes Sus-like systems
  JOURNAL   Curr Opin Struct Biol 22 (5), 563-569 (2012)
   PUBMED   22819666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07980.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Hymenobacter sp. NBH84"
                     /db_xref="taxon:2596915"
     Protein         1..97
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /calculated_mol_wt=10774
     Region          <2..97
                     /region_name="SusD_RagB"
                     /note="SusD family; pfam07980"
                     /db_xref="CDD:429768"
ORIGIN      
        1 maaaellnnv rrrnypagsa slygsggavl teqelldewg refigegrrr idlirfgkfn
       61 nsawwdkspd gddhtkiypi plnalnvspq lkqnpgy
//
LOCUS       WP_258048990              94 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3858 domain-containing protein [Hymenobacter sp. NBH84].
ACCESSION   WP_258048990
VERSION     WP_258048990.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter sp. NBH84
  ORGANISM  Hymenobacter sp. NBH84
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024372.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12970.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Hymenobacter sp. NBH84"
                     /db_xref="taxon:2596915"
     Protein         1..94
                     /product="DUF3858 domain-containing protein"
                     /calculated_mol_wt=10406
     Region          <5..82
                     /region_name="DUF3858"
                     /note="Domain of Unknown Function with PDB structure
                     (DUF3858); pfam12970"
                     /db_xref="CDD:404007"
ORIGIN      
        1 mdfgaltdev nqvtltlpag yvveempkpi vvelpdnggr flysispgen slqiisrlnl
       61 rkavysaeey aalrdfysrl makqaeqivl kkks
//
LOCUS       WP_258049011             172 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-L-arabinofuranosidase C-terminal domain-containing protein
            [Hymenobacter sp. NBH84].
ACCESSION   WP_258049011
VERSION     WP_258049011.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter sp. NBH84
  ORGANISM  Hymenobacter sp. NBH84
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Gilead,S. and Shoham,Y.
  TITLE     Purification and characterization of alpha-L-arabinofuranosidase
            from Bacillus stearothermophilus T-6
  JOURNAL   Appl Environ Microbiol 61 (1), 170-174 (1995)
   PUBMED   7887599
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018647.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06964.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Hymenobacter sp. NBH84"
                     /db_xref="taxon:2596915"
     Protein         1..172
                     /product="alpha-L-arabinofuranosidase C-terminal
                     domain-containing protein"
                     /GO_function="GO:0046556 - alpha-L-arabinofuranosidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0046373 - L-arabinose metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=18584
     Region          1..162
                     /region_name="Alpha-L-AF_C"
                     /note="Alpha-L-arabinofuranosidase C-terminal domain;
                     pfam06964"
                     /db_xref="CDD:462053"
ORIGIN      
        1 mtglerngev vemasyaplf ahvdawqwtp dmiwfdnlns ygtpsyyvqk lfslnkgtti
       61 lpvqlpgnak ngqdnlfvsa vtddpagdvv vklinystta rpvtlnlaga kkvgktgkai
      121 vmasndlqmq nslkepmkla pkeetfrvss gsavsytlap nsftvlripg kk
//
LOCUS       WP_258049012             529 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Hymenobacter sp. NBH84].
ACCESSION   WP_258049012
VERSION     WP_258049012.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter sp. NBH84
  ORGANISM  Hymenobacter sp. NBH84
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (residues 1 to 529)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Hymenobacter sp. NBH84"
                     /db_xref="taxon:2596915"
     Protein         1..529
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=57337
     Region          46..325
                     /region_name="GH43_ABN-like"
                     /note="Glycosyl hydrolase family 43 protein such as
                     endo-alpha-L-arabinanase; cd08999"
                     /db_xref="CDD:350113"
     Site            order(54..55,70,109,159,179,222,249,310)
                     /site_type="other"
                     /note="putative chemical substrate binding site [chemical
                     binding]"
                     /db_xref="CDD:350113"
     Region          346..524
                     /region_name="GH43_C2"
                     /note="Beta xylosidase C-terminal Concanavalin A-like
                     domain; pfam17851"
                     /db_xref="CDD:436093"
ORIGIN      
        1 mtfsllsaar qhamlllvgg lsvgacqqst apttattpap attianpilp gdfpdpsvaq
       61 igdtywatat tsnwgpvfpl lkskdlakwe lvghvfpegr pdwadyyfwa peisqeggkt
      121 yvfytahqrg gnlavgvasa dtpagpyhdh gplvgqpdgs idafpmrden nqlyliwked
      181 gnsvsqptpi waqrlnddrt allgekqelf rndaaweagl vegvsmvrhe gyfyafyagn
      241 gccgngctya tgvarsrnll gpwekysknp imvnndtwkc pghgtvvqrd ghwfllhhay
      301 dsqgfqnvgr qgvlsefmwn aegwpefqgr sttvgaapal tahnltdefn katllptwqw
      361 pvehkptfqv kdgqlrltas pegsgavlgq ptytttytvt ttllnpaalp tgttagltah
      421 gdpdnalalt aggghmqlwq rikgqqkvla dmplpatktl qlrmqvekgs qyrfswstda
      481 gktwqspptt tpvdgtylpp wdrgvrvglv aqgpasatgt fenftlvnq
//
LOCUS       WP_258049050              99 aa            linear   BCT 02-MAR-2025
DEFINITION  MATE family efflux transporter, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258049050
VERSION     WP_258049050.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01554.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>99
                     /product="MATE family efflux transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          1..>81
                     /region_name="PRK00187"
                     /note="NorM family multidrug efflux MATE transporter"
                     /db_xref="CDD:166843"
ORIGIN      
        1 msspslvelk ailrlagpli aaqlayvamv ftdtvmmgkl gpdalaaggl gavsyafvst
       61 fcvgvvaavg nlvairhgcd daagaaaagg rsgsarspg
//
LOCUS       WP_258049123             215 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258049123
VERSION     WP_258049123.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>215
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          29..>183
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mptpdknnki dvqafidaqa vsafqlrvls lcflivamdg fdtaaigfia palahdwqls
       61 paqlspilga alaglalgaf aagpladrfg rksvlllsvl ffggwslasa yagsvetlal
      121 lrfftglglg gampnaitlt seycprrhra lmvtamfcgf tlgsalggll aarmvpalgw
      181 esvlllgggl plletplaip rfaeqvmgpf griwl
//
LOCUS       WP_258049114             110 aa            linear   BCT 02-MAR-2025
DEFINITION  S49 family peptidase [Hymenobacter sp. NBH84].
ACCESSION   WP_258049114
VERSION     WP_258049114.1
KEYWORDS    RefSeq.
SOURCE      Hymenobacter sp. NBH84
  ORGANISM  Hymenobacter sp. NBH84
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013506.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01343.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Hymenobacter sp. NBH84"
                     /db_xref="taxon:2596915"
     Protein         1..110
                     /product="S49 family peptidase"
                     /GO_function="GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=11413
     Region          <1..102
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     Site            3
                     /site_type="active"
                     /db_xref="CDD:132923"
ORIGIN      
        1 mcsagywags sanggivvgg rtamigsigt ktefldfrgf yeklgikqvg anatastnkn
       61 aafdqliagn aepiqqelld plnevllstv ranragktvw atysarsttp
//
LOCUS       WP_258049190             323 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258049190
VERSION     WP_258049190.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..323
                     /product="phosphopantetheine-binding protein"
     Region          <170..312
                     /region_name="entF"
                     /note="enterobactin non-ribosomal peptide synthetase EntF;
                     PRK10252"
                     /db_xref="CDD:236668"
ORIGIN      
        1 lealptpaag erlrvavldt raglwldqgm asllrpglel tlfersrvll daaatrlper
       61 ivvqalddgl lpaehlgryd rvisfaalha yeasreglal aaallrpqgr lllvdllces
      121 plallgaall ddrplrlael pslladlaaa glaprclwrs erlalveala pglgldaaal
      181 qagleqrlpq amrperlwcl pslplngngk vdrrrlaesm tralgecrhe psaeepleah
      241 eqalaecwea vlkrpvrrre asffslggds llatrllagi rerfgvrlgm adfyrqptla
      301 glarhlqaqt veieetqlee gvl
//
LOCUS       WP_258049143             657 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Pseudomonas aeruginosa].
ACCESSION   WP_258049143
VERSION     WP_258049143.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..657
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=69694
     Region          7..258
                     /region_name="STKc_PknB_like"
                     /note="Catalytic domain of bacterial Serine/Threonine
                     kinases, PknB and similar proteins; cd14014"
                     /db_xref="CDD:270916"
     Site            order(7,31..32,61,66,71..74,86)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:270916"
     Site            order(14..15,17..20,22,35,37,69,85..88,92,94,129,131,
                     133..134,136,146..147,150,168..171)
                     /site_type="active"
                     /db_xref="CDD:270916"
     Site            order(14..15,17..20,22,35,37,69,85..88,92,131,133..134,
                     136,146..147)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270916"
     Site            order(18,92,94,129,131,133,150,168..171)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270916"
     Site            order(146..154,164..171)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270916"
     Region          250..619
                     /region_name="PRK14995"
                     /note="SmvA family efflux MFS transporter"
                     /db_xref="CDD:184957"
ORIGIN      
        1 mdielpgfdi erelgegama tvylatqrsl qrkvalkvma aalaadpsfa erflregrtl
       61 arlshpntvt ihdignvgsc yymameylpn gtlkeriqqg ldpelglvyv rqvaaalgya
      121 hsqglvhrdv kpanilfrad gtavlsdfgi aksiedntqf tqvgfavgtp symspeqarg
      181 qeidgradly algvvlyeil tgklpyngkd slstalahlt eplpelpieq gryqdilrql
      241 lakdpaerfp tagaliaara glavgaalmm patlsivrhv fqdererala igiwasvasa
      301 gaalgpvvgg vlleffwwgs vflinvpvvv valllalpai pacggqsrrp wdalgslqvm
      361 fglvgvvyai kelstrapdf glavlaalgg mlclylfvrr qrrarepmid falfrnrrfa
      421 rgvavalvat malvgmelvf sqhlqlvqgl tplkaglfvl piplaslvvg plagwlvprw
      481 genrvmcasl llgsagllgl alsyqsatga qlaslvllgv gfggamtaas tavmlnvdeq
      541 ssgmaaaied vsyelggvig vtllgslmsf vygmslrlps aelparvrds lddallvaeg
      601 lapevasrlv elarqafdqa fvavllaaaa llflsamavl rqprpatepa ppaphtr
//
LOCUS       WP_258049188             325 aa            linear   BCT 02-MAR-2025
DEFINITION  thioesterase domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258049188
VERSION     WP_258049188.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 325)
  AUTHORS   Schneider,A. and Marahiel,M.A.
  TITLE     Genetic evidence for a role of thioesterase domains, integrated in
            or associated with peptide synthetases, in non-ribosomal peptide
            biosynthesis in Bacillus subtilis
  JOURNAL   Arch Microbiol 169 (5), 404-410 (1998)
   PUBMED   9560421
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013166.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00975.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..325
                     /product="thioesterase domain-containing protein"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <24..315
                     /region_name="EntF2"
                     /note="Thioesterase domain of type I polyketide synthase
                     or non-ribosomal peptide synthetase [Secondary metabolites
                     biosynthesis, transport and catabolism]; COG3319"
                     /db_xref="CDD:442548"
ORIGIN      
        1 qnasqassnc gssssaekda sknaerrgra ppgavaldpl vrlvpgegvp rvlvheglgt
       61 llpyrpllra lgegrpllgl avhdsdayla ipaehlnacl grryaealhr aglrevdllg
      121 ycsgglvale takslvqrgv rvrqldivss yripyrvdde rlllfsfaat lgldtaalgf
      181 paperlgqav qaalaqtper lvaealaglp gladlvalrg rvlqaasgsa daasverdtl
      241 yrlfchsvra sqaaapepyv galrlfvpda gnplvpryae aletqwraaa lgacgihevp
      301 gghfdclgea laqslskpmp eeasr
//
LOCUS       WP_258049243             191 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258049243
VERSION     WP_258049243.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 191)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..191
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <4..191
                     /region_name="PRK07524"
                     /note="5-guanidino-2-oxopentanoate decarboxylase"
                     /db_xref="CDD:236041"
ORIGIN      
        1 rcirariraa haplqalhqa ildriaaalp adafvstdmt qlaytgnyaf asraprswlh
       61 ptgygtlgyg lpagigaklg apqrpglvlv gdggflytaq elataseeld splvvllwnn
      121 dalgqirddm lgldiepvgv lprnpdfall graygcavrq pqdldelerd lragfgqpgv
      181 tlielrhaca r
//
LOCUS       WP_258049252             100 aa            linear   BCT 02-MAR-2025
DEFINITION  Ulp1 family isopeptidase, partial [Escherichia coli].
ACCESSION   WP_258049252
VERSION     WP_258049252.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 100)
  AUTHORS   Mossessova,E. and Lima,C.D.
  TITLE     Ulp1-SUMO crystal structure and genetic analysis reveal conserved
            interactions and a regulatory element essential for cell growth in
            yeast
  JOURNAL   Mol Cell 5 (5), 865-876 (2000)
   PUBMED   10882122
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014901.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02902.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..100
                     /product="Ulp1 family isopeptidase"
                     /GO_function="GO:0008234 - cysteine-type peptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          <1..100
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
ORIGIN      
        1 dlqqylsqsc gafvcmaaqe vieqresnsd sapytllkny adrfkkysae eqyeidfqhr
       61 linrncyldk ygdaninhyy knleikhtqp knrasgkrvs
//
LOCUS       WP_258049295             283 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258049295
VERSION     WP_258049295.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>283
                     /product="phosphopantetheine-binding protein"
     Region          <4..86
                     /region_name="AcpA"
                     /note="Acyl carrier protein/domain [Lipid transport and
                     metabolism, Secondary metabolites biosynthesis, transport
                     and catabolism]; COG3433"
                     /db_xref="CDD:442659"
     Region          104..>273
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mdlppdsrta lrdwlteqla dllgepladv raladdddll gcgldsirlm ylqerlrarg
       61 stldfaqlaq rpclgawldl lacadrlsap atvalpaaqd rdqpfelssv qqaywlgrga
      121 gevlgnvsch aflefrardv dpqrlaaaae cvrqrhpmlr arfldgrqqi lptpplscfd
      181 lqdwrtlqvd eaerdwqalr dwraheclav ergqvfllgl vrmpggedrl wlsldllaad
      241 veslrlllae lgvaylaper laeppalhfa dylarraaqr aea
//
LOCUS       WP_258049296             141 aa            linear   BCT 02-MAR-2025
DEFINITION  M3 family metallopeptidase, partial [Escherichia coli].
ACCESSION   WP_258049296
VERSION     WP_258049296.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013591.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01432.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..141
                     /product="M3 family metallopeptidase"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          <1..140
                     /region_name="PRK10280"
                     /note="peptidyl-dipeptidase Dcp"
                     /db_xref="CDD:182353"
ORIGIN      
        1 lfnkgyemse llsaalldmr whcleeneam qdvddfelra lvaenmdlpa ippryrssyf
       61 ahifgggyaa gyyaylwtqm laddsyqwfv eqggltreng lrfreailsr gnsedlerly
      121 rqwrgkapqi mpmlqhrgln i
//
LOCUS       WP_258049337             112 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase, partial [Escherichia coli].
ACCESSION   WP_258049337
VERSION     WP_258049337.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 112)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..112
                     /product="PfkB family carbohydrate kinase"
     Region          <1..112
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
     Site            order(27,54,57..58,61)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238177"
ORIGIN      
        1 lisgktqndr dicalakeye iamllvtkga egvvvcyrgq vhhfagmsvn cvdstgagda
       61 fvaglltgls stglstdere mrriidlaqr cgalavtakg amtalpcrqe le
//
LOCUS       WP_258049319             116 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258049319
VERSION     WP_258049319.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 116)
  AUTHORS   Ren,J., Sainsbury,S., Nettleship,J.E., Saunders,N.J. and Owens,R.J.
  TITLE     The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals
            a novel protein fold incorporating a helix-turn-helix motif
  JOURNAL   Proteins 78 (7), 1798-1802 (2010)
   PUBMED   20196080
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013540.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01381.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>116
                     /product="helix-turn-helix domain-containing protein"
ORIGIN      
        1 mstigerlre ererkgmnqs sfaevggvqk raqinyekde rhpdaaylaa iaaagvdvly
       61 vltgqrapla tdqayvapsq hmtekinpvt rsvvaeplge yrlnqrekal ienyrg
//
LOCUS       WP_258049342             494 aa            linear   BCT 02-MAR-2025
DEFINITION  GA-like domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_258049342
VERSION     WP_258049342.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 494)
  AUTHORS   Whelan,F., Lafita,A., Gilburt,J., Degut,C., Griffiths,S.C.,
            Jenkins,H.T., St John,A.N., Paci,E., Moir,J.W.B., Plevin,M.J.,
            Baumann,C.G., Bateman,A. and Potts,J.R.
  TITLE     Periscope Proteins are variable-length regulators of bacterial cell
            surface interactions
  JOURNAL   Proc Natl Acad Sci U S A 118 (23) (2021)
   PUBMED   34074781
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047257.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22775.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..494
                     /product="GA-like domain-containing protein"
ORIGIN      
        1 nadtlkgead savkalpdta aekgglqgrv daldgiqvpe vndqdgngka daeeaaaava
       61 aatekveaae aadkaakdkl aelnadklit peekaqleta kqnadtlkge adsavkalpd
      121 taaekgglqg rvdaldgiqv pevndqdgng kadaeeaava fyeralpsnv sgdlypqpsi
      181 fgdkvssvsk nwstlldsnp gsyvtsqrld sganqynyng htgsdvisit dsfggldrtq
      241 asrfpvglft gegndlivtg rdygrntsag ytdhshrtdm gngddtlvvg vgnndvtlyv
      301 neegqlratt dsyngstsid ytglnssssg gtisgtdivm gagndtvlal gyegnsadai
      361 intnidlgag ndfiyangei stnngtqvni iggegfdtis ldnttvtsam fsgfehvdlh
      421 stshlilnsd dfksqdiege ilkisgssga svdvqnfdwe nlssandgdv kyftyqstdi
      481 pgltlwiqeg ievk
//
LOCUS       WP_258049309             615 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258049309
VERSION     WP_258049309.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 615)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>615
                     /product="AMP-binding protein"
     Region          <28..>615
                     /region_name="PRK05691"
                     /note="peptide synthase; Validated"
                     /db_xref="CDD:235564"
ORIGIN      
        1 fkavldgqve dpaafierlr afsawlqrqa spaaryslrv dealaraire aaldheasvf
       61 mwllaafqal lhrhsgqgei rigvpsanrq rletqglvgf fintlvlrgt prarqpfaal
      121 lgeareatlg aqanqdlpfd qvlaacgqgg qlfqvlfnhq qrdlsalrrl pglladelpw
      181 hsreakfdlq lqseedargr ltlnfdyaad lfdeasirrf aaqylellrq vaedpqrclg
      241 dialvdaeea arlaewgsap ceparawlpe llerqlaqsa erialewdgg slgyaelhar
      301 anrlahylrd kgvgpdvrva icaerspqll vgllaivkag gayvpldpdy pserlaymla
      361 dsgvellltq ahlferlpga egvtpiclds lkldnwpsqa pglhlhgdnl ayviytsgst
      421 gqpkgvgnth valaerlqwm qatyaldgdd vlmqkapvsf dvsvwecfwp lvtgcrlvla
      481 apgehrdpar lvelvrqfgv ttlhfvppll qlfidepgva acgslrrlfs ggealpaelr
      541 nrvlqrlpav alhnrygpte tainvthwqc raedgerspi grplgnvvcr vldaefnllp
      601 agvagelcig glgla
//
LOCUS       WP_258049344             168 aa            linear   BCT 02-MAR-2025
DEFINITION  OB-fold nucleic acid binding domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_258049344
VERSION     WP_258049344.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 168)
  AUTHORS   Koonin,E.V., Wolf,Y.I. and Aravind,L.
  TITLE     Protein fold recognition using sequence profiles and its
            application in structural genomics
  JOURNAL   Adv Protein Chem 54, 245-275 (2000)
   PUBMED   10829230
REFERENCE   2  (residues 1 to 168)
  AUTHORS   Bochkarev,A., Pfuetzner,R.A., Edwards,A.M. and Frappier,L.
  TITLE     Structure of the single-stranded-DNA-binding domain of replication
            protein A bound to DNA
  JOURNAL   Nature 385 (6612), 176-181 (1997)
   PUBMED   8990123
REFERENCE   3  (residues 1 to 168)
  AUTHORS   Keshav,K.F., Chen,C. and Dutta,A.
  TITLE     Rpa4, a homolog of the 34-kilodalton subunit of the replication
            protein A complex
  JOURNAL   Mol Cell Biol 15 (6), 3119-3128 (1995)
   PUBMED   7760808
REFERENCE   4  (residues 1 to 168)
  AUTHORS   Ruff,M., Krishnaswamy,S., Boeglin,M., Poterszman,A., Mitschler,A.,
            Podjarny,A., Rees,B., Thierry,J.C. and Moras,D.
  TITLE     Class II aminoacyl transfer RNA synthetases: crystal structure of
            yeast aspartyl-tRNA synthetase complexed with tRNA(Asp)
  JOURNAL   Science 252 (5013), 1682-1689 (1991)
   PUBMED   2047877
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013499.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01336.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>168
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
     Region          1..>168
                     /region_name="asnC"
                     /note="asparaginyl-tRNA synthetase; Validated; PRK03932"
                     /db_xref="CDD:235176"
ORIGIN      
        1 msvvpvadvl qgrvavdsev tvrgwvrtrr dskagisfla vydgscfdpv qavinnslpn
       61 ynedvlrltt gcsvivtgkv vaspgqgqqf eiqaskveva gwvedpdtyp maakrhsiey
      121 lrevahlrpr tnligavarv rhtlaqalhr ffneqgffwv stplitas
//
LOCUS       WP_258049348             217 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein, partial [Escherichia coli].
ACCESSION   WP_258049348
VERSION     WP_258049348.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 217)
  AUTHORS   Wang,J., Hofnung,M. and Charbit,A.
  TITLE     The C-terminal portion of the tail fiber protein of bacteriophage
            lambda is responsible for binding to LamB, its receptor at the
            surface of Escherichia coli K-12
  JOURNAL   J Bacteriol 182 (2), 508-512 (2000)
   PUBMED   10629200
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024939.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13550.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>217
                     /product="phage tail protein"
     Region          <1..>217
                     /region_name="COG4733"
                     /note="Phage-related protein, tail protein J [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443767"
ORIGIN      
        1 ytnsdvvvdd ngvgfrysfs alkdrhtave vnytdpqngw qtstelvedp dailrygrnl
       61 lkmdafgcts rgqahraglw viktelletq tvdftlgsqg lrhtpgdiie icdndyagtl
      121 tggrilsida asrtltldre vtlpetgtst vnlingsgkp vrvditahpa pdriqvsvlp
      181 dgvatygvwg lslpslrrrl frcvsirent dgtfait
//
LOCUS       WP_417281899             483 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase [Catellatospora aurea].
ACCESSION   WP_417281899
VERSION     WP_417281899.1
KEYWORDS    RefSeq.
SOURCE      Catellatospora aurea
  ORGANISM  Catellatospora aurea
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Catellatospora.
REFERENCE   1  (residues 1 to 483)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   2  (residues 1 to 483)
  AUTHORS   Simm,R., Morr,M., Kader,A., Nimtz,M. and Romling,U.
  TITLE     GGDEF and EAL domains inversely regulate cyclic di-GMP levels and
            transition from sessility to motility
  JOURNAL   Mol Microbiol 53 (4), 1123-1134 (2004)
   PUBMED   15306016
REFERENCE   3  (residues 1 to 483)
  AUTHORS   Ausmees,N., Mayer,R., Weinhouse,H., Volman,G., Amikam,D.,
            Benziman,M. and Lindberg,M.
  TITLE     Genetic data indicate that proteins containing the GGDEF domain
            possess diguanylate cyclase activity
  JOURNAL   FEMS Microbiol Lett 204 (1), 163-167 (2001)
   PUBMED   11682196
REFERENCE   4  (residues 1 to 483)
  AUTHORS   Hecht,G.B. and Newton,A.
  TITLE     Identification of a novel response regulator required for the
            swarmer-to-stalked-cell transition in Caulobacter crescentus
  JOURNAL   J Bacteriol 177 (21), 6223-6229 (1995)
   PUBMED   7592388
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: TIGR00254.1
            Evidence Source    :: JCVI
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Catellatospora aurea"
                     /db_xref="taxon:1337874"
     Protein         1..483
                     /product="diguanylate cyclase"
                     /EC_number="2.7.7.65"
                     /GO_function="GO:0009975 - cyclase activity [Evidence
                     IEA]"
                     /GO_process="GO:0009966 - regulation of signal
                     transduction [Evidence IEA]"
                     /calculated_mol_wt=50454
     Region          <42..121
                     /region_name="MsrC"
                     /note="GAF domain-containing protein, putative
                     methionine-R-sulfoxide reductase [Defense mechanisms,
                     Signal transduction mechanisms]; COG1956"
                     /db_xref="CDD:441559"
     Region          105..>481
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
     Region          340..480
                     /region_name="GGDEF"
                     /note="Diguanylate-cyclase (DGC) or GGDEF domain; cd01949"
                     /db_xref="CDD:143635"
     Site            order(369,412)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143635"
     Site            order(374,377..378,382,386,408,410..413)
                     /site_type="active"
                     /db_xref="CDD:143635"
     Site            order(404,432)
                     /site_type="active"
                     /note="I-site [active]"
                     /db_xref="CDD:143635"
ORIGIN      
        1 mplpriiddv svalrtsrsa veacnatvsv lsrhtpalie allhvkdqlr cvsasgawqv
       61 fsavplghgv vgrvyasgka vtildvandp dyirlgppit seicapiidr tghpvgvina
      121 ewaeaqpldg waetlteagr llgarlselg gppaetrseq llrhalaltn aetdadvlvr
      181 acraarevtg laaavllrpa pdllpeeqel rvviaasspe prdrplvarl aqidpdrlaa
      241 lldeacryga sytlgdpavl dargfealta agvrtmiavp lgagtpvvss svgalvvlde
      301 taivpdsalv nllellaaqa stcleklttl rrlhlqansd pltglghggp fgdrlanatp
      361 grtallaidi dqfksvndtl ghaagdrvlv qmssalqqal rlgdelfrvg gdefvavvdv
      421 psaaeallva erlvaaarat grtisvgvai qgeleppeaa myradqalya vkrngrngvr
      481 lap
//
LOCUS       WP_258049543             267 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramoyl-L-alanine amidase [Streptomyces finlayi].
ACCESSION   WP_258049543
VERSION     WP_258049543.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces finlayi
  ORGANISM  Streptomyces finlayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 267)
  AUTHORS   Cheng,X., Zhang,X., Pflugrath,J.W. and Studier,F.W.
  TITLE     The structure of bacteriophage T7 lysozyme, a zinc amidase and an
            inhibitor of T7 RNA polymerase
  JOURNAL   Proc Natl Acad Sci U S A 91 (9), 4034-4038 (1994)
   PUBMED   8171031
REFERENCE   2  (residues 1 to 267)
  AUTHORS   Wang,X., Wilkinson,B.J. and Jayaswal,R.K.
  TITLE     Sequence analysis of a Staphylococcus aureus gene encoding a
            peptidoglycan hydrolase activity
  JOURNAL   Gene 102 (1), 105-109 (1991)
   PUBMED   1677905
REFERENCE   3  (residues 1 to 267)
  AUTHORS   Potvin,C., Leclerc,D., Tremblay,G., Asselin,A. and Bellemare,G.
  TITLE     Cloning, sequencing and expression of a Bacillus bacteriolytic
            enzyme in Escherichia coli
  JOURNAL   Mol Gen Genet 214 (2), 241-248 (1988)
   PUBMED   3070348
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013661.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01510.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Streptomyces finlayi"
                     /db_xref="taxon:67296"
     Protein         1..267
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /EC_number="3.5.1.28"
                     /GO_function="GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=27552
     Region          67..196
                     /region_name="PGRP"
                     /note="Peptidoglycan recognition proteins (PGRPs) are
                     pattern recognition receptors that bind, and in certain
                     cases, hydrolyze peptidoglycans (PGNs) of bacterial cell
                     walls. PGRPs have been divided into three classes: short
                     PGRPs (PGRP-S), that are small (20...; cl02712"
                     /db_xref="CDD:470657"
     Site            order(101,134,237,243,245)
                     /site_type="active"
                     /note="amidase catalytic site [active]"
                     /db_xref="CDD:133475"
     Site            order(101,237,245)
                     /site_type="other"
                     /note="Zn binding residues [ion binding]"
                     /db_xref="CDD:133475"
     Site            order(102..103,130,134,148,168..169,174,237,243..245)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:133475"
ORIGIN      
        1 mcaggadgdp atrvgvlvpa ggaagyelrv pdgagdlrat aldtvngptv aassapatrr
       61 iggveyvtra gwgadeslrf kadgsenspq tyypaqtltv hhtagvngdp dpaatirayy
      121 hqhaitndwg digyhflide agriyegrys gadglpahdt tgkmvtafha agynsgnlgi
      181 allgtfidqs taaaarnslt lllaalsavh dfdpqadvtf vnpvngvkrn vpmisghrdw
      241 latecpgatl yselpalrad vaavfsg
//
LOCUS       WP_258049648             180 aa            linear   BCT 02-MAR-2025
DEFINITION  MmpS family transport accessory protein [Streptomyces finlayi].
ACCESSION   WP_258049648
VERSION     WP_258049648.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces finlayi
  ORGANISM  Streptomyces finlayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 180)
  AUTHORS   Brosch,R., Gordon,S.V., Marmiesse,M., Brodin,P., Buchrieser,C.,
            Eiglmeier,K., Garnier,T., Gutierrez,C., Hewinson,G., Kremer,K.,
            Parsons,L.M., Pym,A.S., Samper,S., van Soolingen,D. and Cole,S.T.
  TITLE     A new evolutionary scenario for the Mycobacterium tuberculosis
            complex
  JOURNAL   Proc Natl Acad Sci U S A 99 (6), 3684-3689 (2002)
   PUBMED   11891304
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017260.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05423.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Streptomyces finlayi"
                     /db_xref="taxon:67296"
     Protein         1..180
                     /product="MmpS family transport accessory protein"
                     /calculated_mol_wt=18520
ORIGIN      
        1 mpttqeqnep eqadqaeqae qscpsdgqea tgkpsrspdr rgiavaaall lacgalityg
       61 ildtgddrad kesavptaav tyevlgegta dityrgdgdd dradtvknae lpwkktvdvp
      121 lgtapvisit lgekggeasc tlavrgkhvq rstasgaygr stcttelsap epsapteetg
//
LOCUS       WP_258049605             392 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1214 domain-containing protein [Streptomyces finlayi].
ACCESSION   WP_258049605
VERSION     WP_258049605.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces finlayi
  ORGANISM  Streptomyces finlayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018452.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06742.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Streptomyces finlayi"
                     /db_xref="taxon:67296"
     Protein         1..392
                     /product="DUF1214 domain-containing protein"
                     /calculated_mol_wt=42422
     Region          <9..391
                     /region_name="COG5361"
                     /note="Uncharacterized conserved protein [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:444136"
ORIGIN      
        1 mglpgpdrgv ggrylfvppg yegplpesgf ftcrtrttrl llggrafleg ddpkpvaerv
       61 keglrlyryv pglygtslae ivtggtappl pwtaqtwtaa lqkpapprfv egtglsmnti
      121 ppsdatyfdl aselvhdqpa ealdpeiaga laaigivkgk dfqpdtrmrg ilseaaavgn
      181 atartlaflp rpaegahyyg assqwlnvll esghdfltpp avvtdkgvqp rqgdgarmln
      241 rrswwwylav gvspafstpl tgvgsqyvfa fadregrsld ggrnyrlvlp sdipaarfws
      301 ctvydnqtrs mldtpqrfpr agsqdypspa asadadgttt vhfgpdrphg vpegnwiqtt
      361 pgkgwftvlr lysplqpffd ktwrpgeiea vd
//
LOCUS       WP_258049709             715 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Clostridium weizhouense].
ACCESSION   WP_258049709
VERSION     WP_258049709.1
KEYWORDS    RefSeq.
SOURCE      Clostridium weizhouense
  ORGANISM  Clostridium weizhouense
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (residues 1 to 715)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 715)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Clostridium weizhouense"
                     /db_xref="taxon:2859781"
     Protein         1..715
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=81966
     Region          <48..203
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          <269..420
                     /region_name="COG5263"
                     /note="Glucan-binding domain (YG repeat) [Carbohydrate
                     transport and metabolism]"
                     /db_xref="CDD:444077"
     Region          428..714
                     /region_name="ComEC"
                     /note="DNA uptake channel protein ComEC C-terminal domain,
                     metallo-beta-lactamase superfamily [Intracellular
                     trafficking, secretion, and vesicular transport]; COG2333"
                     /db_xref="CDD:441904"
ORIGIN      
        1 mqnkfkrvit lvmiiafisg icpqvtafaa tkkelttvnt nngtsidkne inketkdnsi
       61 dksnnreenk dlkknttgkg dsdktknsdk ktinasddkl ddesnkvide llddedevkp
      121 ktgwqvingk rfyfteegml kkkgwvelde yiykgtksnp qtieavlkdv nlnnkfkdnn
      181 kenkkildee knninsdnne didvlddene eeikneedkd skiedkkdke ikdndklkeh
      241 kkststsnnv tiiidpsqdp nyelhknkyy fdddysavvg wqeiggkwyn fndlgimrtg
      301 wslinynwff ldddgemktg wfkdgtnkfy lnesgamifg knyiddkwyy fhssgvlatg
      361 vylrdgkwyy snkdgemisn kwidlndkky yvkanselav gniiidgkmq hfdndgvyqg
      421 tgimeehlyi kylnvgdgdc iyiklpnget alidtgdnnk ssqntlidfl edqnlkedae
      481 gkgiidyvvi thphsdhigg lyevlknfkv nkiympnrtr medysdlkee gefastikdm
      541 kkdyhvyqkt lnlikeldip fldavqykai deegilkfvq pdksylstfd sripakywil
      601 ndqsavvyln ygdlgalftg diewpaekdy skldlllnkk vdvlkvphhg lntsstldfl
      661 nyvgadigvi srasgsvnkn naynnltngk vtifetsekd gvslyatkqn wnvqy
//
LOCUS       WP_258049802             224 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Streptomyces finlayi].
ACCESSION   WP_258049802
VERSION     WP_258049802.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces finlayi
  ORGANISM  Streptomyces finlayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025052.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13671.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Streptomyces finlayi"
                     /db_xref="taxon:67296"
     Protein         1..224
                     /product="AAA family ATPase"
                     /calculated_mol_wt=24554
     Region          17..>71
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Region          51..>182
                     /region_name="Kti12"
                     /note="tRNA uridine 5-carbamoylmethylation protein Kti12
                     (Killer toxin insensitivity protein) [Translation,
                     ribosomal structure and biogenesis, Defense mechanisms];
                     COG4088"
                     /db_xref="CDD:443264"
     Site            60..67
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213261"
ORIGIN      
        1 mqryattaga ahgavspqka vpvretfgth apvvrdlrsr ggrsprsldf aagdvvvvsg
       61 lpgsgkstli rrtvtdraid sqdtrdrwar alprllpyal yrplvraahy tglwqalrsg
      121 esvvvhdcgt qtwvrrwlar darrrgrilh lvlldvtpev aregqrergr gvsgyafarh
      181 rrsvgrlmrd tetgllpagc asavlldrga adaldrvtfe srqt
//
LOCUS       WP_258049869             257 aa            linear   BCT 02-MAR-2025
DEFINITION  LysM peptidoglycan-binding domain-containing protein [Clostridium
            weizhouense].
ACCESSION   WP_258049869
VERSION     WP_258049869.1
KEYWORDS    RefSeq.
SOURCE      Clostridium weizhouense
  ORGANISM  Clostridium weizhouense
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (residues 1 to 257)
  AUTHORS   Bateman,A. and Bycroft,M.
  TITLE     The structure of a LysM domain from E. coli membrane-bound lytic
            murein transglycosylase D (MltD)
  JOURNAL   J Mol Biol 299 (4), 1113-1119 (2000)
   PUBMED   10843862
REFERENCE   2  (residues 1 to 257)
  AUTHORS   Joris,B., Englebert,S., Chu,C.P., Kariyama,R., Daneo-Moore,L.,
            Shockman,G.D. and Ghuysen,J.M.
  TITLE     Modular design of the Enterococcus hirae muramidase-2 and
            Streptococcus faecalis autolysin
  JOURNAL   FEMS Microbiol Lett 70 (3), 257-264 (1992)
   PUBMED   1352512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01476.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Clostridium weizhouense"
                     /db_xref="taxon:2859781"
     Protein         1..257
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=27986
     Region          27..140
                     /region_name="NLPC_P60"
                     /note="NlpC/P60 family; cl21534"
                     /db_xref="CDD:473902"
     Region          <163..246
                     /region_name="mltD"
                     /note="membrane-bound lytic murein transglycosylase D;
                     Provisional; PRK10783"
                     /db_xref="CDD:182727"
ORIGIN      
        1 mgkiekattw minlandnsh gydqthrwgp nydcssavit awetagvpvk srgatytgnm
       61 ksvflkcgfs ditssirlsn gsglkrgdvl lntsshtamf igngqivhas inennrttgg
      121 ksgdqtgrei cirsyynkpw ncilryndgg gnnnntdgtt ytvksgdvls kiatrfgvsv
      181 aqlqkwnnis npnliyvgqv lkikgdsskv ttytvkrgdv lskiatrfgv svaqlqkwnn
      241 isnpnliyvg qvlkiyl
//
LOCUS       WP_258049927             196 aa            linear   BCT 02-MAR-2025
DEFINITION  Rpn family recombination-promoting nuclease/putative transposase,
            partial [Clostridium weizhouense].
ACCESSION   WP_258049927
VERSION     WP_258049927.1
KEYWORDS    RefSeq.
SOURCE      Clostridium weizhouense
  ORGANISM  Clostridium weizhouense
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016629.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04754.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Clostridium weizhouense"
                     /db_xref="taxon:2859781"
     Protein         1..>196
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
     Region          1..>190
                     /region_name="RpnC"
                     /note="Recombination-promoting DNA endonuclease RpnC/YadD
                     [Replication, recombination and repair]; COG5464"
                     /db_xref="CDD:444215"
ORIGIN      
        1 mskkhdydaa wktileafev evvevlfpei fdeiawelgs esldlelqei qreifdkdsa
       61 ekiisdkiik vklkdnnski lfihvevqsy ssdedafger mfryfyriwd kfryknkdks
      121 evigaaiyty kgergkdkry vykvpniene iliynfrtid vekinlesis ddnplklvfk
      181 maktlletks sdediy
//
LOCUS       WP_258049934             246 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Streptomyces finlayi].
ACCESSION   WP_258049934
VERSION     WP_258049934.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces finlayi
  ORGANISM  Streptomyces finlayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Streptomyces finlayi"
                     /db_xref="taxon:67296"
     Protein         1..246
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=26156
     Region          104..>158
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mtetlppvgi dlfdverlql tevpepplsp sdqaardrvw dkavqanptl fdgpvvacsg
       61 lewagprtvr lswvrvtyrh yalrrvpgat alpslfvnil qttdngrvla armspstaap
      121 grwqlpggsv epprngevld gpglagqaar emveelgica gpealrlwav trgenssvgl
      181 tylapalpes avraafaaaa aaeraqgrep elddialvrs pgelvsltgp hadylepivr
      241 rysagr
//
LOCUS       WP_258049950             214 aa            linear   BCT 02-MAR-2025
DEFINITION  rhomboid-like protein [Streptomyces finlayi].
ACCESSION   WP_258049950
VERSION     WP_258049950.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces finlayi
  ORGANISM  Streptomyces finlayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042501.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20401.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Streptomyces finlayi"
                     /db_xref="taxon:67296"
     Protein         1..214
                     /product="rhomboid-like protein"
                     /calculated_mol_wt=22994
     Region          42..205
                     /region_name="Rhomboid_2"
                     /note="Rhomboid-like protein; pfam20401"
                     /db_xref="CDD:466550"
ORIGIN      
        1 mrqsrmprkr paaraltair rwitgapgty twlilllltt vfaqelpaqp saslhvlmdd
       61 plrvllpgal ridgghwlly aalftvfhat aehwlgtlrw ltvaaaaqfl apfvtaavlt
      121 wavrhghapp yavhtpgtgp gyalagvaav ltyriprpwr alyafavlva havplvsgst
      181 faelghstav ltglacyplv ralprcetrg ataq
//
LOCUS       WP_258049966             205 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Streptomyces finlayi].
ACCESSION   WP_258049966
VERSION     WP_258049966.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces finlayi
  ORGANISM  Streptomyces finlayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Streptomyces finlayi"
                     /db_xref="taxon:67296"
     Protein         1..205
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=22310
     Region          <33..203
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mieryvdhrp ipelavhlgl eeeespatag tdlvwlgrid eekaphiavr aaqilgrrir
       61 ivgpvfdeay vrrherlfsa dhvkwigelg gpaktaaiad asvfvytyar pyveagaavf
      121 geslragtpm aaltwregtc ahaalcdetg avavvdaree detaarslad aiekaecldh
      181 rhvqaigmqr fdparhfeam aarsc
//
LOCUS       WP_258049989             317 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5819 family protein [Streptomyces finlayi].
ACCESSION   WP_258049989
VERSION     WP_258049989.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces finlayi
  ORGANISM  Streptomyces finlayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040205.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19136.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Streptomyces finlayi"
                     /db_xref="taxon:67296"
     Protein         1..317
                     /product="DUF5819 family protein"
                     /calculated_mol_wt=33779
     Region          135..295
                     /region_name="DUF5819"
                     /note="Family of unknown function (DUF5819); pfam19136"
                     /db_xref="CDD:465980"
ORIGIN      
        1 mvidgdrggm dadhgggaes erkaawpeav ghradgpvge padggtdagt griprqdagr
       61 dagldpgpng sphlspaadt ngggdvvppa aaarrsgiag lslpyqvvaa lalavlgvlg
      121 avhlamvflh vapsntltkq hseaiddwvy pefeqnwklf apnplqqnia vhvraevagd
      181 dgrritpwms lsgedgeair gnllpshvdq nelrrgwdff lnshdsenrs nglrgdlser
      241 yvrrivmlrl dahdyggtve riqvrsavrs vpapawseek tntrptyrvl pwwtvdpadl
      301 pgddaaaras qgeetdk
//
LOCUS       WP_258050033             393 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase domain-containing protein [Streptomyces finlayi].
ACCESSION   WP_258050033
VERSION     WP_258050033.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces finlayi
  ORGANISM  Streptomyces finlayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025033.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13649.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Streptomyces finlayi"
                     /db_xref="taxon:67296"
     Protein         1..393
                     /product="methyltransferase domain-containing protein"
                     /calculated_mol_wt=43207
     Region          30..379
                     /region_name="methyltr_grsp"
                     /note="methyltransferase, ATP-grasp peptide maturase
                     system; TIGR04188"
                     /db_xref="CDD:275041"
ORIGIN      
        1 mttpnlaase riairdllga vsadmgtpmr peweraawvv prsafvperv ylgdklescd
       61 rasspeawlr avyaddsvvt qvndgsdpdd gerwasssas apsivfrmlh mldvhdghrv
      121 leigtgtgwn agllahvagp gnvttvevdp vlaseaggrl reegvtvdvv tgdgaegyag
      181 napydrlvat csvrsvphpw leqvkpggvi ltpwespwic ygllrmtvdd tksasgpfsp
      241 hsafmlmrnq rtdlrifrdv vrddhqpdes tttlppwrvt gddlaaqfam gmqlrdvwwt
      301 whdnpdvegv asrlwlsttd atswaavdwd gktdarftaw qygprrlwne aetayawwtl
      361 hdrpgperfg ltvtatgetp wlddpdqlvp ttg
//
LOCUS       WP_258050035             382 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Streptomyces finlayi].
ACCESSION   WP_258050035
VERSION     WP_258050035.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces finlayi
  ORGANISM  Streptomyces finlayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024871.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13480.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Streptomyces finlayi"
                     /db_xref="taxon:67296"
     Protein         1..382
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /calculated_mol_wt=41254
     Region          <130..366
                     /region_name="FemAB_like"
                     /note="Peptidogalycan biosysnthesis/recognition;
                     pfam04339"
                     /db_xref="CDD:461267"
ORIGIN      
        1 mslphyaqtg dgvlaapdaa alvdmgwndl agvedffqtp rwlavqerns gttmdflvrh
       61 rdgapvaglv aawatdsvpw llarpdalls raadeevpga agilaevadg eaasllpslv
      121 cggrhlgrtr llaapgarpe dlaalldhae glaeerkaas vcfphvdvrd lslvellesr
      181 gyrshtsahy awlpippggw eeflagmskh rrrrvrlerr alaeagvevt vepltqelvp
      241 rlgeldsnll kkygnpaspe hsagllswia dvmgddvmvs varqngavig fgmvlrsrar
      301 geehwfghra gfdyeaqgkl plyydvlyyr vleaaaaagv svlhagigsv eaklargcqa
      361 seersyvlri prtdkdrrta pr
//
LOCUS       WP_258050062             468 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Streptomyces finlayi].
ACCESSION   WP_258050062
VERSION     WP_258050062.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces finlayi
  ORGANISM  Streptomyces finlayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 468)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 468)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 468)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 468)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Streptomyces finlayi"
                     /db_xref="taxon:67296"
     Protein         1..468
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=49531
     Region          34..444
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mlgcllavss aacsggpegt pqagqdgnat dqgpivvasg ldvtgsggvr qqlieewnrk
       61 hasskseqak lvelpggadq qrsqllgalq sgsagydvvn lditwipefa eaglirpmpe
      121 eetvdrdfin rvhrttlwkg rsyarpfntd vgllyyrpdl leaagiqpsr qptlnwswgd
      181 lnasiktlal spgrgddqag wttqlkqyeg ltantveafa svgveladee gryraseadl
      241 kkgldeller trhdrilasa vsadetatla dfaagrvafl rhwpyvygal rtllppdays
      301 vnrlpgasvl ggqnlaatad spragnaral iafltsqese rclldagfaa trasayngns
      361 rpcwprvaaa lrpadgasta tggpssapps kageggakdq gaaarkaftw tlsgalkeav
      421 qrprtpyyga ftqvlqahvh allsaerpds akaagrlhld lrdafegk
//
LOCUS       WP_258050098             129 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Streptomyces finlayi].
ACCESSION   WP_258050098
VERSION     WP_258050098.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces finlayi
  ORGANISM  Streptomyces finlayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 129)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 129)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Streptomyces finlayi"
                     /db_xref="taxon:67296"
     Protein         1..129
                     /product="VOC family protein"
                     /calculated_mol_wt=13057
     Region          <54..118
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 matqpdpghl gavgggdgrg csvrdrpgaf pagsghgvag ecrfeqtegv gassprtaai
       61 sgvgaahtsg lilaftltgi edeekrlrae gvaitvppre epwgerpfqv tdpngviiqf
      121 veratpada
//
LOCUS       WP_258049984             511 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaB-like helicase N-terminal domain-containing protein
            [Streptomyces finlayi].
ACCESSION   WP_258049984
VERSION     WP_258049984.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces finlayi
  ORGANISM  Streptomyces finlayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 511)
  AUTHORS   Fass,D., Bogden,C.E. and Berger,J.M.
  TITLE     Crystal structure of the N-terminal domain of the DnaB hexameric
            helicase
  JOURNAL   Structure 7 (6), 691-698 (1999)
   PUBMED   10404598
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012974.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00772.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Streptomyces finlayi"
                     /db_xref="taxon:67296"
     Protein         1..511
                     /product="DnaB-like helicase N-terminal domain-containing
                     protein"
                     /GO_function="GO:0003678 - DNA helicase activity [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /calculated_mol_wt=54311
     Region          28..>157
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Region          210..506
                     /region_name="RepA"
                     /note="RecA-family ATPase [Replication, recombination and
                     repair]; COG3598"
                     /db_xref="CDD:442817"
ORIGIN      
        1 mpqgttpqwq apsadltpvd tfgmqstpsh dveaeaavlg acmyqaavid evrqalepgd
       61 fyrpahttiw hallelrqqg apadpialah hlrshgdlar vggapylhtl asaavagsga
      121 eyyadivrhh adlrmlqsta irvlqgatap gadpaevrsl latslseaad rarrssagrl
      181 qryavdgwsf vadtqattep vwgtpgkaaw asgeslmlvg ppgvgkstia qqivlarlgl
      241 iaqvldmpvr egekvlyiaa drpsqlaraf trvvhqadrd vlrrrlvfws gplpaslnte
      301 pqllaelaae hgadtvvids lkdvvgkltd deaglaynna rqqllrdgve llelhhqrkq
      361 gpdvsrtqrp vldqvygsaw ytagagsvlf lsgaagdpvv hlhhlktvdd eigplpvihd
      421 hprgtsrvdt sldpltllrq tgsggltare lstqitgenk pstadiarar rrlealtksg
      481 haiqetgagg gtgggqatrw katsrhitav s
//
LOCUS       WP_258050195             338 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Streptomyces
            finlayi].
ACCESSION   WP_258050195
VERSION     WP_258050195.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces finlayi
  ORGANISM  Streptomyces finlayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 338)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 338)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 338)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 338)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Streptomyces finlayi"
                     /db_xref="taxon:67296"
     Protein         1..338
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=35680
     Region          <10..325
                     /region_name="UvrA"
                     /note="Excinuclease UvrABC ATPase subunit [Replication,
                     recombination and repair]; COG0178"
                     /db_xref="CDD:439948"
ORIGIN      
        1 melhelsahn vttdlvrfpv grltcltgvs gsgkssllga igagaeaalt gtaadavrrv
       61 tgserfrwva vadqepigrt prsnpatysk afdivrklfa etdearkrgi ksswfsfnta
      121 nggrcetctg ygrklvnmhf lpdvwvvcda cegrrytpea leityqglti dgvleltiae
      181 averltehrq laealeamer vglgylrlgq natelsggea qrlklasviq rgsagrkagl
      241 vlldepvsgl hpsdiqrmvd afdllldsgn tvvvaehdip vaasadwvid lgpgagpdgg
      301 avvaagtpde vaeadtptag ffrrytaglp llggpgdh
//
LOCUS       WP_258050198            1163 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphodiester glycosidase family protein [Streptomyces finlayi].
ACCESSION   WP_258050198
VERSION     WP_258050198.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces finlayi
  ORGANISM  Streptomyces finlayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 1163)
  AUTHORS   Das,D., Lee,W.S., Grant,J.C., Chiu,H.J., Farr,C.L., Vance,J.,
            Klock,H.E., Knuth,M.W., Miller,M.D., Elsliger,M.A., Deacon,A.M.,
            Godzik,A., Lesley,S.A., Kornfeld,S. and Wilson,I.A.
  TITLE     Structure and function of the DUF2233 domain in bacteria and in the
            human mannose 6-phosphate uncovering enzyme
  JOURNAL   J Biol Chem 288 (23), 16789-16799 (2013)
   PUBMED   23572527
REFERENCE   2  (residues 1 to 1163)
  AUTHORS   Kang,C., Riazuddin,S., Mundorff,J., Krasnewich,D., Friedman,P.,
            Mullikin,J.C. and Drayna,D.
  TITLE     Mutations in the lysosomal enzyme-targeting pathway and persistent
            stuttering
  JOURNAL   N Engl J Med 362 (8), 677-685 (2010)
   PUBMED   20147709
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021507.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09992.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Streptomyces finlayi"
                     /db_xref="taxon:67296"
     Protein         1..1163
                     /product="phosphodiester glycosidase family protein"
                     /calculated_mol_wt=120437
     Region          5..>662
                     /region_name="RhsA"
                     /note="Uncharacterized conserved protein RhaS, contains 28
                     RHS repeats [General function prediction only]; COG3209"
                     /db_xref="CDD:442442"
     Region          <215..425
                     /region_name="NAGPA"
                     /note="Sugar-P-sugar glycosidase (uncovering enzyme, UCE),
                     NAGPA superfamily [Carbohydrate transport and metabolism];
                     COG4632"
                     /db_xref="CDD:443670"
     Region          <659..1163
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          799..1033
                     /region_name="CpdA"
                     /note="3',5'-cyclic AMP phosphodiesterase CpdA [Signal
                     transduction mechanisms]; COG1409"
                     /db_xref="CDD:441019"
ORIGIN      
        1 mgtcrsgtvv rslvllvtls atvagaitpa tadpnpdprp adaaeilrpv appsasnadg
       61 gatsvvdgdg ietarssrpv apgvrltsyd rlesdkwlrv dtlavdldgs gvradylstg
      121 kvaerrtvse laaahdpgeg rrtvaainad ffdinqtgap qgpgvkdgam vhspapgihr
      181 avgigpesag rvlelyfegt ltlpsgghpl taynaanvpa ggvgaytsaw gsadraltvd
      241 aatpvaeaav rdgrvvsvsn tpgsgpvpdg ttvlvgregg aallsalrpg dpvsmeyrar
      301 tdsatvprta vggrellvvd gvaqnhdggg nntaaprtav gfsrdgrtmq vitvdgrqad
      361 sggvtltela tmmlragsys alnldgggss tllarrpgsd alevenspsd gsertvpngl
      421 altapdgsgr ldgfwvetrt pagaapgddp vrgghpervf pgltrqltad ghdetygpaa
      481 gtphwntvas avgradstgl ftarrsgtte vvaqrgaarg strltvldel ariqpttrrv
      541 gladadatgt fgivgldahg tsapveprdv tldydhalfd vrdndrggft visrtgsgag
      601 qiratvagtt talavsvglt eqavsafdda aswkfsqara sgslaatpdg rtgtglklty
      661 dftrstatra ayaappqpvv vpgqpqsysm wirgdgngaw ptlhlkdaag sdqllrgpfv
      721 twtgwrqvtf avpagaatpl svfrfylaet aaarqytgei vvddltaqvp ptvalpeqps
      781 aenplidpaa vtegrdwqfa vmsdaqfvar epnspivaqa rrtlreikta apdflvingd
      841 lvdegspadl afarriltee lgdslpwyyv pgnhevmggk idnfvaefgp arrtfdhkgt
      901 rmitldtssl slrgggfaqi khlreqldaa ardtgvgsvi liehvpprdp tvqkgsqlgd
      961 rkeaalverw ladfrrttgk gaaligshvg vfhashvdgv pylingnagk apagpadegg
     1021 ftgwsligad rvtpqeqnaa rhrpwqgapd wvsaqtrahv dalaldapsa latgqrvevt
     1081 atvtqgarrv pvtfplsadw taspnvhigt esgarprhta vldpttgtlt alragavtla
     1141 vtvngttsra diritaeeaa saa
//
LOCUS       WP_258050211              75 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Streptomyces finlayi].
ACCESSION   WP_258050211
VERSION     WP_258050211.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces finlayi
  ORGANISM  Streptomyces finlayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 75)
  AUTHORS   Swint-Kruse,L. and Matthews,K.S.
  TITLE     Allostery in the LacI/GalR family: variations on a theme
  JOURNAL   Curr Opin Microbiol 12 (2), 129-137 (2009)
   PUBMED   19269243
REFERENCE   2  (residues 1 to 75)
  AUTHORS   Fukami-Kobayashi,K., Tateno,Y. and Nishikawa,K.
  TITLE     Parallel evolution of ligand specificity between LacI/GalR family
            repressors and periplasmic sugar-binding proteins
  JOURNAL   Mol Biol Evol 20 (2), 267-277 (2003)
   PUBMED   12598694
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13377.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Streptomyces finlayi"
                     /db_xref="taxon:67296"
     Protein         1..75
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=7902
     Region          <1..70
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 malgvlralq eagrrvpddv svvgyddipe apyllppltt vhndfaetgr raldlllrel
       61 rgdggaastr ssrsg
//
LOCUS       WP_258050236              91 aa            linear   BCT 02-MAR-2025
DEFINITION  barstar family protein [Streptomyces finlayi].
ACCESSION   WP_258050236
VERSION     WP_258050236.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces finlayi
  ORGANISM  Streptomyces finlayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 91)
  AUTHORS   Buckle,A.M., Schreiber,G. and Fersht,A.R.
  TITLE     Protein-protein recognition: crystal structural analysis of a
            barnase-barstar complex at 2.0-A resolution
  JOURNAL   Biochemistry 33 (30), 8878-8889 (1994)
   PUBMED   8043575
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013500.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01337.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Streptomyces finlayi"
                     /db_xref="taxon:67296"
     Protein         1..91
                     /product="barstar family protein"
                     /calculated_mol_wt=9316
     Region          <2..>31
                     /region_name="Barstar_like"
                     /note="Barstar is an intracellular inhibitor of barnase,
                     an extracellular ribonuclease of Bacillus
                     amyloliquefaciens. Barstar binds tightly to the barnase
                     active site and sterically blocks it, thus inhibiting its
                     potentially lethal RNase activity inside the...; cl01048"
                     /db_xref="CDD:470045"
     Site            order(7,9,11..13,17)
                     /site_type="other"
                     /note="RNAase interaction site [polypeptide binding]"
                     /db_xref="CDD:240166"
ORIGIN      
        1 mngpggyfgr nldafadcls ggtgtpddgd fsraaalrss tgcgdhqgar gpghaaaelt
       61 raragsvqpr rvqylvetlt ppkpwaacrl m
//
LOCUS       WP_417281900             384 aa            linear   BCT 02-MAR-2025
DEFINITION  sensor histidine kinase [Catellatospora aurea].
ACCESSION   WP_417281900
VERSION     WP_417281900.1
KEYWORDS    RefSeq.
SOURCE      Catellatospora aurea
  ORGANISM  Catellatospora aurea
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Catellatospora.
REFERENCE   1  (residues 1 to 384)
  AUTHORS   Dutta,R. and Inouye,M.
  TITLE     GHKL, an emergent ATPase/kinase superfamily
  JOURNAL   Trends Biochem Sci 25 (1), 24-28 (2000)
   PUBMED   10637609
REFERENCE   2  (residues 1 to 384)
  AUTHORS   Stock,J.
  TITLE     Signal transduction: Gyrating protein kinases
  JOURNAL   Curr Biol 9 (10), R364-R367 (1999)
   PUBMED   10339418
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11472026
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Catellatospora aurea"
                     /db_xref="taxon:1337874"
     Protein         1..384
                     /product="sensor histidine kinase"
                     /EC_number="2.7.13.3"
                     /GO_function="GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=41228
     Region          1..357
                     /region_name="WalK"
                     /note="Sensor histidine kinase WalK [Signal transduction
                     mechanisms]; COG5002"
                     /db_xref="CDD:444026"
ORIGIN      
        1 miervldwlt hpmyrvlgpl ivlsnrvldr lprpldpfrs iklklaillg isgatgllvf
       61 wgrlgfvnwp vaisaalvgl itlqvlahgm tkplremtaa aramargdys rrvratsrde
      121 vgelarafnl maadlaasdq qrrelianvs helrtpital hgvlenivdg vseadpatlr
      181 talaqterla rlvtelldls kvdagaaalr repmpvaefl arvveeasln apatrfrlhd
      241 vtphtisadp arlhqvfanl lenaarhspa gglvtvsarp tgtqtvfevl dqgvgiapal
      301 rervferftr gksaessdgg tglglaiarw avelhhgtia ivdppggtgc rvritlpqks
      361 mphqspaevg andvrhlsgh psaa
//
LOCUS       WP_258050344             254 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Streptomyces finlayi].
ACCESSION   WP_258050344
VERSION     WP_258050344.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces finlayi
  ORGANISM  Streptomyces finlayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Streptomyces finlayi"
                     /db_xref="taxon:67296"
     Protein         1..254
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=27782
     Region          <9..107
                     /region_name="GlxA"
                     /note="Transcriptional regulator GlxA, contains an amidase
                     domain and an AraC-type DNA-binding HTH domain
                     [Transcription]; COG4977"
                     /db_xref="CDD:444002"
ORIGIN      
        1 mttntienav rrvvdymhvn lgqnltiddm artamfskfh ftrifrevtg tspgrflsal
       61 rmqeakrllv hsthsvadis sqvgyssvgt fssrfkacvg lspsayrdfg gvqpgfpsta
      121 srntpvaqnl slrgrvhspp dekpekvfvg lfpgrlrqgr pvrwvtlqgp gtfelrdvpv
      181 gtwhilahsv pdthephsfg seqlllgqsg pqvvhpgall rpvdillrlv naldppvlla
      241 rfasdeqpgp hapr
//
LOCUS       WP_258050416             329 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258050416
VERSION     WP_258050416.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>329
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          1..>317
                     /region_name="ArpD"
                     /note="ABC-type protease/lipase transport system, ATPase
                     and permease components [Intracellular trafficking,
                     secretion, and vesicular transport]; COG4618"
                     /db_xref="CDD:443660"
ORIGIN      
        1 mklrpasprn eilatlgrfr palrsvalft avinllmlap slymlqvydr vlgsgnhmtl
       61 lmltlmvlgl ylllgalewv rslvvirlgg qldmqlnqri ydasfrasle rgeqaagqal
      121 ndltslrqfl tgnalfaffd apwfplyllv iflfspwlgl lalvgalllv llawvnesrs
      181 replaeagql silatqqasa nlrqaetlaa mgmlpamrar wfaqhqafla rqnlgsersa
      241 aigatskgvr lalqslvlgl gawlavegli tpgmmiagsi lmgrvlspid qliavwrqws
      301 garqayqrla rlleenpvsy thlrahetl
//
LOCUS       WP_258050419             175 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258050419
VERSION     WP_258050419.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 175)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>175
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          9..>165
                     /region_name="COG4908"
                     /note="Uncharacterized conserved protein, contains a NRPS
                     condensation (elongation) domain [General function
                     prediction only]"
                     /db_xref="CDD:443936"
ORIGIN      
        1 mmaeirrpls averwywlsd qfsalnvisr vrvhgqlsid dlrrgldalq arhpllrari
       61 ehdagldprw vpcerpiplr evrgggeeqw lreinerelp eridpdsgpl irtvaiatda
      121 gahdllvvvp hiiadgttvl tlaeqwltla adpaaqpwta salppaedlr prrft
//
LOCUS       WP_258050482             143 aa            linear   BCT 02-MAR-2025
DEFINITION  protein-disulfide reductase DsbD domain-containing protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258050482
VERSION     WP_258050482.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 143)
  AUTHORS   Bushweller,J.H.
  TITLE     Protein Disulfide Exchange by the Intramembrane Enzymes DsbB, DsbD,
            and CcdA
  JOURNAL   J Mol Biol 432 (18), 5091-5103 (2020)
   PUBMED   32305461
REFERENCE   2  (residues 1 to 143)
  AUTHORS   Smith,R.P., Whitten,A.E., Paxman,J.J., Kahler,C.M., Scanlon,M.J.
            and Heras,B.
  TITLE     Production, biophysical characterization and initial
            crystallization studies of the N- and C-terminal domains of DsbD,
            an essential enzyme in Neisseria meningitidis
  JOURNAL   Acta Crystallogr F Struct Biol Commun 74 (Pt 1), 31-38 (2018)
   PUBMED   29372905
REFERENCE   3  (residues 1 to 143)
  AUTHORS   Goulding,C.W., Sawaya,M.R., Parseghian,A., Lim,V., Eisenberg,D. and
            Missiakas,D.
  TITLE     Thiol-disulfide exchange in an immunoglobulin-like fold: structure
            of the N-terminal domain of DsbD
  JOURNAL   Biochemistry 41 (22), 6920-6927 (2002)
   PUBMED   12033924
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022853.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11412.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>143
                     /product="protein-disulfide reductase DsbD
                     domain-containing protein"
     Region          18..>130
                     /region_name="dipZ"
                     /note="thiol:disulfide interchange protein precursor;
                     Provisional; PRK00293"
                     /db_xref="CDD:234717"
ORIGIN      
        1 mrvlilllml llpglsqaqp gddlfaprga tqtdflpvek afrftwerld dgqvqlrwqi
       61 apgyylyqkr lrfdgldpal qpqlppgesh sdeffgesqv yrqsleltlp aaaagqlrlg
      121 wqgcadaglc lslihisept rrs
//
LOCUS       WP_258049968             398 aa            linear   BCT 02-MAR-2025
DEFINITION  methionine adenosyltransferase [Streptomyces finlayi].
ACCESSION   WP_258049968
VERSION     WP_258049968.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces finlayi
  ORGANISM  Streptomyces finlayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 398)
  AUTHORS   Lu,Z.J. and Markham,G.D.
  TITLE     Enzymatic properties of S-adenosylmethionine synthetase from the
            archaeon Methanococcus jannaschii
  JOURNAL   J Biol Chem 277 (19), 16624-16631 (2002)
   PUBMED   11872742
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01941.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Streptomyces finlayi"
                     /db_xref="taxon:67296"
     Protein         1..398
                     /product="methionine adenosyltransferase"
                     /calculated_mol_wt=43478
     Region          9..392
                     /region_name="AdoMet_Synthase"
                     /note="S-adenosylmethionine synthetase (AdoMet
                     synthetase); cl27474"
                     /db_xref="CDD:474927"
ORIGIN      
        1 mvqpnattiv erkglghpdt ladhlaerls raysrytveh fgavlhhnfd klallggase
       61 vrygaggmts pvrvlvngra apmcggepip vteiveaevr sffaerlaev sghlditfni
      121 tsnsspgavl tgdavpdrtr wfnprsiddl rerrvrlsnd tslgtgwape npfesfvrel
      181 vdhfsgesef tlsrawcgsd vklmgywdgd qadvvlcvpq ksrhvgsrae yvrntesvla
      241 ecyrlaglrl pgskarfrln ardvperdel yltytgssie sgdegvagrg nrvnglitpl
      301 rpmnlegang knpvyhvgkl ynvaaqrlan rlyeatggha evhlvsttgq rldqpwrilv
      361 rlsspdaevd kvqalvmeal gefpaltdel vsdgivls
//
LOCUS       WP_258050527             347 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258050527
VERSION     WP_258050527.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 347)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..347
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
     Region          <1..315
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
ORIGIN      
        1 pvvfkahsgh mataervaaa ilraaertgm pagvfnmiyg ggvgerlvrh paiqavgftg
       61 slkggralcd maaaraqpip vfaemssinp vvllpaalkk rgeavadels asvvlgcgqf
      121 ctnpglvigi rsaqfsafle rfaarmddqp aqtmlnagtl asyekglaal hahprvrhla
      181 gqpqegrqar pqlfqadvsl llegdellqe evfgpasvvv evadhaelkr alhglhgqlt
      241 atliaeaedl asfadlvpll eqkagrllln gyptgvevcd amvhggpypa tsdargtsvg
      301 tlaidrflrp vcyqnypdaw lpealkdgnp lgiarlvdgv gtraaid
//
LOCUS       WP_258050558              87 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: LysR substrate-binding domain-containing protein,
            partial [Pseudomonas].
ACCESSION   WP_258050558
VERSION     WP_258050558.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas
  ORGANISM  Pseudomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae.
REFERENCE   1  (residues 1 to 87)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Pseudomonas"
                     /db_xref="taxon:286"
     Protein         <1..87
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <1..53
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 vcllpgfvaa ralqegsllr llpghrlhvr evfvlyssrr yldakirtwv dflrerlpla
       61 ferdraildd rrywaesptg varetat
//
LOCUS       WP_258050562             360 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258050562
VERSION     WP_258050562.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 360)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>360
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <23..89
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
     Region          131..>360
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
     Site            order(267..268,272)
                     /site_type="active"
                     /db_xref="CDD:380459"
ORIGIN      
        1 kldrrallaa laaeaaaqpl eapanateaa lldiwksvlk rpaigvsdnf fqvggdsirl
       61 iqmqvmarqa glaftlrdvf nhqsirelar llaapanpad aaatsapral epfallsaae
      121 rkrlpegldd aypmtslqqg mllqseasgd prllhnvvlh evhgrldgel larawailig
      181 rhailrtgfd lhggqaplqw vhpatavaae vpvqdlrgld eearrlrlra wieeeqatpf
      241 dwsrpplvrl aalalderrf algvaehhsv ldgwslqslv dellavyadl lagvvareae
      301 apavgfrdyv alereaeana gsalfwldyl agaryrplpg laeegprrma avrvdvpads
//
LOCUS       WP_258050569             166 aa            linear   BCT 02-MAR-2025
DEFINITION  thioesterase domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258050569
VERSION     WP_258050569.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 166)
  AUTHORS   Schneider,A. and Marahiel,M.A.
  TITLE     Genetic evidence for a role of thioesterase domains, integrated in
            or associated with peptide synthetases, in non-ribosomal peptide
            biosynthesis in Bacillus subtilis
  JOURNAL   Arch Microbiol 169 (5), 404-410 (1998)
   PUBMED   9560421
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013166.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00975.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>166
                     /product="thioesterase domain-containing protein"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <1..164
                     /region_name="EntF2"
                     /note="Thioesterase domain of type I polyketide synthase
                     or non-ribosomal peptide synthetase [Secondary metabolites
                     biosynthesis, transport and catabolism]; COG3319"
                     /db_xref="CDD:442548"
     Region          <66..>134
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 vlvheglgtl lpyrpllrgl gegrpllgla vhdsdaylai paehlnaclg rryaealhga
       61 glrevdllgy csgglvalet akslvqrgvr vrqldivssy ripyrvdder lllfsfaatl
      121 gldtaalgfp aperlglvvq aalaqtperl gaealaglpg ladlva
//
LOCUS       WP_258050570              88 aa            linear   BCT 02-MAR-2025
DEFINITION  SAM-dependent methyltransferase, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258050570
VERSION     WP_258050570.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00590.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>88
                     /product="SAM-dependent methyltransferase"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
     Region          2..>86
                     /region_name="TP_methylase"
                     /note="S-AdoMet-dependent tetrapyrrole methylases;
                     cl00304"
                     /db_xref="CDD:444820"
ORIGIN      
        1 msgklyalss gpgaadlitv raarilgqld vlyapagrkg gdslalsivr eylgahtevr
       61 crhfpistds adkeavwnda aaarapgv
//
LOCUS       WP_258050573             154 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY-family carbohydrate kinase, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258050573
VERSION     WP_258050573.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 154)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 154)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02782.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>154
                     /product="FGGY-family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <1..154
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 pglltaslgt sgtlaayaer plvsphgela tfcassggwl plactmnltg acglvqdllh
       61 ldldefsrla aqapvgaegl lmlpffdger vpalphasas lhgmtaanls ranlcravle
      121 gtafglrygl dllrasglpg eeirlvggaa kspl
//
LOCUS       WP_258050586            1563 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258050586
VERSION     WP_258050586.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..1563
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..1563
                     /product="Ig-like domain-containing protein"
     Region          <5..424
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          <333..767
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          637..1095
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          1283..1534
                     /region_name="COG2931"
                     /note="Ca2+-binding protein, RTX toxin-related [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:442175"
ORIGIN      
        1 asvtvdsqap aapvlnpsng ttlsgtaepg atvtltdgng npigqvtadg sgnwsftpgt
       61 plangtvvna tasdptgnts apasttvdsv apaapvvnps ngaeisgtae pgatvtltdg
      121 sgnpigqvta dgsgnwsftp stpladgtvv natatdpagn tggqgsttvd aiapatptvn
      181 lsngsslsgt aepgstvilt dgngnpiaev tadgsgnwty tpstpiangt vvnvvaedaa
      241 gnssppatvt vdssappapv inpsngvvis gtaeagatvt ltdaggnpig qvtadgsgnw
      301 sftpgtplan gtvivatatd ptgntgpqaa ttvdsvapaa pvvnpsngtt isgtaeagak
      361 viltdgsgnp igettadgsg nwtftpgtpl angtvvnava qdpagntgpq gsttvdavap
      421 ntpvvnpsng nllngtaepg stvtltdgng npigqttadg sgnwsftpgs qlpngtvvnv
      481 tasdaagnts ppatttvdss lpsipqvdps ngsvisgtad agntiiitdg ngnpigqvta
      541 dgsgnwsftp giplpdgtvv nvvarspsnv dsapavitvd gvapaapvid psngsviagt
      601 aeagatvilt dgggnpigqa tadgsgnwtf tpsiplangt vinavaqdpa gntsgpasvt
      661 vdaiappapv inpsngvvis gtaeagatvi ltdgngnpig qvtadgsgnw sftpgtplan
      721 gsvinalaqd aagntsgpas ttvdsvapat pvldpsngtv isgtaeagat viltdgggnp
      781 igqatadgsg nwsftpgtpl tngtvinava qdaagntsgp vsttvdavap aipvidpsng
      841 velsgtaepg vrviltdgng npigqtladg sgnwsftpst plangtvvna vaqdpagnts
      901 gpasttvdtv apatpvinas ngsvitgtae vgakviltdg ngnpigetta dgsgnwtftp
      961 gtplangtvi navaedaagn asgpasttvd svapsaplls isadgalltg taepnsqvri
     1021 vvngdtanpi tvtvdgagnf slpfapplit geliagvavd aagnvsgpat inapdlappt
     1081 isvpeaadtw inaaeigdgi qvdvtvrptm qvgqvvtvkf agqngyeaev shtltagdia
     1141 agnltltltp pggmgpfpeg astvtading gtastpvpft idtippatpv lslvgnilti
     1201 saepgteltv tvdvggvtat atvtadnsgl aslnlltdld idfswdqlln aqvsvvgrdp
     1261 agnpsntasi gvgtsieqpv tignfgldvs lnplnprfgf sgttepdssv virvitpaln
     1321 vellpiqads sgnfslnlls ptiltqlgln itdilnlgsq isfnlvstds ngndsaaygi
     1381 tltpnglsln igqidvngts gddvlsgang ssehinggdg sdlifnvgtg dhvvagngnd
     1441 tiqitatdfv sidggagfdt lvlangidld ynavgvgtls nleridlgkg dsgsvltlta
     1501 aevdaitdan ntlqitgenn dtlnvvgavn tgttqlingi tydvytfgst tlliedntvq
     1561 vvl
//
LOCUS       WP_258050588             223 aa            linear   BCT 02-MAR-2025
DEFINITION  RodZ domain-containing protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258050588
VERSION     WP_258050588.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 223)
  AUTHORS   Alyahya,S.A., Alexander,R., Costa,T., Henriques,A.O., Emonet,T. and
            Jacobs-Wagner,C.
  TITLE     RodZ, a component of the bacterial core morphogenic apparatus
  JOURNAL   Proc Natl Acad Sci U S A 106 (4), 1239-1244 (2009)
   PUBMED   19164570
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024855.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13464.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..223
                     /product="RodZ domain-containing protein"
     Region          <46..222
                     /region_name="PRK10856"
                     /note="cytoskeleton protein RodZ"
                     /db_xref="CDD:236776"
ORIGIN      
        1 qngcgpfrgp ettapppdpa glprahveve sadgpteiht ldepedqavi eaqkegeqap
       61 aevspevaaq aegappvase gaqvlaapaq gtpaapqqpv taapagtapa papgtapavp
      121 ataspaappa pseptaapvv agegqgvvkv qfvadcwtqv tdangkvlvs alkrkgdsle
      181 lagkaplelr lgfargaqvs yngqpvdvtp fvrgetarlk vgq
//
LOCUS       WP_258050589             250 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258050589
VERSION     WP_258050589.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 250)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>250
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          29..>216
                     /region_name="PRK07524"
                     /note="5-guanidino-2-oxopentanoate decarboxylase"
                     /db_xref="CDD:236041"
ORIGIN      
        1 mgaralrrer rlrwspnwtr ilpmqpqktl tagqalvrll anygvdtvfg ipgvhtlely
       61 rglpgsgirh vltrheqgag fmadgyarvs gkpgvcfvit gpgvtnvata igqayadsvp
      121 llvissvnhs aslgkgwgcl hetqdqramt apitafsala lspeqlpeli arayavfdse
      181 rprpvhisip ldvlaapvah dwsaavarrp grgvpcteal raaaerlaaa rrpmliaggg
      241 alaagdalas
//
LOCUS       WP_258050621             267 aa            linear   BCT 02-MAR-2025
DEFINITION  lyase family protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258050621
VERSION     WP_258050621.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00206.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..267
                     /product="lyase family protein"
     Region          <1..260
                     /region_name="PRK09053"
                     /note="3-carboxy-cis,cis-muconate cycloisomerase;
                     Provisional"
                     /db_xref="CDD:181627"
ORIGIN      
        1 vlqfggasgt laalgeqalp vaaalaeelg lalpeqpwht qrdrlvefas vlglvagslg
       61 kfgrdvsllm qteagevfep agagrggsst mphkrnpvss avliaaatra pglvstlfaa
      121 mpqeherslg lwhaewetlp elcclvsgal qqaigllegl evdaqrmrrn lglthglvla
      181 eavsialarr igreaahhlv eqccrraveq rrelravlge earvsaelsg deldrlldpa
      241 hylgqarawv eralaehhal gfephpa
//
LOCUS       WP_258050642             310 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258050642
VERSION     WP_258050642.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>310
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          1..>303
                     /region_name="ArpD"
                     /note="ABC-type protease/lipase transport system, ATPase
                     and permease components [Intracellular trafficking,
                     secretion, and vesicular transport]; COG4618"
                     /db_xref="CDD:443660"
ORIGIN      
        1 mklrpasprn eilatlgrfr palrsvalft avinllmlap slymlqvydr vlgsgnhmtl
       61 lmltlmvlgl ylllgalewv rslvvirlgg qldmqlnqri ydasfrasle rgeqaagqal
      121 ndltslrqfl tgnalfaffd apwfplyllv iflfspwlgl lalagalllv llawvnesrs
      181 replaeagql silatqqasa nlrqaetlaa mgmlpamrar wfaqhqafla rqnlgsersa
      241 aigatskgvr lalqslvlgl gawlavegli tpgmmiagsi lmgrvlspid qliavwrqws
      301 garpvsythl
//
LOCUS       WP_258050654             168 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258050654
VERSION     WP_258050654.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14559.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>168
                     /product="tetratricopeptide repeat protein"
     Region          21..>140
                     /region_name="ImpE"
                     /note="Protein of avirulence locus involved in
                     temperature-dependent protein secretion [General function
                     prediction only]; COG4455"
                     /db_xref="CDD:443553"
ORIGIN      
        1 madpsfasgr lgsrlqgsia miaeellrag rlddalkalq eqvrsqpsna tlriflfqll
       61 avmgqwaraq nqlkvvgeld asalpmvqty staidcealr revfagrltp vilgqpaewi
      121 apllqalsld aeghgeaaqa pkapagppqp hppppppggp nppprphp
//
LOCUS       WP_258050688             223 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258050688
VERSION     WP_258050688.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 223)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>223
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          14..>216
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 pgwraepdla hqrfpltpvq aayvlgrqaa fdyggnacql yaeydwpadt dparleaawn
       61 amverhpmlr aviednawqr vlpevpwqrl tvhacaglde aafqahlerv rerldhacaa
      121 ldqwpvlrpe lsigqdacvl hcsvdftlvd yaslqlllge wrrryldpqw taepleatfr
      181 dyvgveqrrr qspawqrdrd wwlarldalp grpdlppvsy thl
//
LOCUS       WP_258050739             188 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258050739
VERSION     WP_258050739.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 188)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..188
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <5..188
                     /region_name="PRK07524"
                     /note="5-guanidino-2-oxopentanoate decarboxylase"
                     /db_xref="CDD:236041"
ORIGIN      
        1 dvykrqahap lqalhqaild riaaalpada fvstdmtqla ytgnyafasr aprswlhptg
       61 ygtlgyglpa gigaklgapq rpglvlvgdg gflytaqela taseeldspl vvllwnndal
      121 gqirddmlgl diepvgvlpr npdfallgra ygcavrqpqd ldelerdlra gfgqpgvtli
      181 elrhacar
//
LOCUS       WP_258050719             303 aa            linear   BCT 02-MAR-2025
DEFINITION  thioesterase domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258050719
VERSION     WP_258050719.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 303)
  AUTHORS   Schneider,A. and Marahiel,M.A.
  TITLE     Genetic evidence for a role of thioesterase domains, integrated in
            or associated with peptide synthetases, in non-ribosomal peptide
            biosynthesis in Bacillus subtilis
  JOURNAL   Arch Microbiol 169 (5), 404-410 (1998)
   PUBMED   9560421
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013166.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00975.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..303
                     /product="thioesterase domain-containing protein"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <5..293
                     /region_name="EntF2"
                     /note="Thioesterase domain of type I polyketide synthase
                     or non-ribosomal peptide synthetase [Secondary metabolites
                     biosynthesis, transport and catabolism]; COG3319"
                     /db_xref="CDD:442548"
ORIGIN      
        1 agmsraplae gavaldplvr lvpgegvprv lvheglgtll pyrpllralg egrpllglav
       61 hdsdaylaip aehlnaclgr ryaealhrag lrevdllgyc sgglvaleta kslvqrgvrv
      121 rqldivssyr ipyrvdderl llfsfaatlg ldtaalgfpa perlgqavqa alaqtperlg
      181 aealaglpgl adlvplrvrv pqaasgsada asverdtlyr lfchsvrasq aaapepyvga
      241 lrlfvpdagn plvpryaeal etqwraaalg acgihevpgg hfdclgeala qslskpmpee
      301 asr
//
LOCUS       WP_258050819              67 aa            linear   BCT 02-MAR-2025
DEFINITION  Arc family DNA-binding protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258050819
VERSION     WP_258050819.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 67)
  AUTHORS   Raumann,B.E., Rould,M.A., Pabo,C.O. and Sauer,R.T.
  TITLE     DNA recognition by beta-sheets in the Arc repressor-operator
            crystal structure
  JOURNAL   Nature 367 (6465), 754-757 (1994)
   PUBMED   8107872
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015807.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03869.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..67
                     /product="Arc family DNA-binding protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
     Region          6..55
                     /region_name="Arc"
                     /note="Arc-like DNA binding domain; cl46767"
                     /db_xref="CDD:481107"
ORIGIN      
        1 lpastsrdmd kfvvrlpdgl raeveaeakr dsrsmnsliv valreylhgq rrkqalldal
       61 ttavggr
//
LOCUS       WP_258050856             105 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6162 family protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258050856
VERSION     WP_258050856.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039675.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19659.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>105
                     /product="DUF6162 family protein"
     Region          3..>98
                     /region_name="DUF6162"
                     /note="Family of unknown function (DUF6162); pfam19659"
                     /db_xref="CDD:437491"
ORIGIN      
        1 msvetvrpag aghetlyvll gsvlilalaa tvvglrqqsh eaqaldahqv darldlnaae
       61 qgiyadlqva aediqarldd geaapsvdel aaegfppfvl slihi
//
LOCUS       WP_258050837             254 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258050837
VERSION     WP_258050837.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 254)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>254
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          29..>216
                     /region_name="PRK07524"
                     /note="5-guanidino-2-oxopentanoate decarboxylase"
                     /db_xref="CDD:236041"
ORIGIN      
        1 mgaralrrer rlrwspnwtr ilpmqpqktl tagqalvrll anygvdtvfg ipgvhtlely
       61 rglpgsgirh vltrheqgag fmadgyarvs gkpgvcfvit gpgvtnvata igqayadsvp
      121 llvissvnhs aslgkgwgcl hetqdqramt apitafsala lspeqlpeli arayavfdse
      181 rprpvhisip ldvlaapvah dwsaavarrp grgvpcteal raaaerlaaa rrpmliaggg
      241 alaagsgpga aewp
//
LOCUS       WP_258050893             159 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase family protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258050893
VERSION     WP_258050893.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 159)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00725.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..159
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
     Region          <1..155
                     /region_name="PRK08268"
                     /note="3-hydroxy-acyl-CoA dehydrogenase; Validated"
                     /db_xref="CDD:236211"
ORIGIN      
        1 dlssavqrfa cpaersvgid llcdlerrrc lmlspltapa mrdaahalla gdgagvtvlr
       61 dspgfvvqrv lamivnlacd iaqqgiasve didqavhlgl gyphgplewg drlgprrlls
      121 ilqrlqaltg dpryrpspwl rrraqlgmsl ragetaavg
//
LOCUS       WP_258050903             192 aa            linear   BCT 02-MAR-2025
DEFINITION  ArsB/NhaD family transporter, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258050903
VERSION     WP_258050903.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014135.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02040.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..192
                     /product="ArsB/NhaD family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015105 - arsenite transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0015700 - arsenite transport [Evidence
                     IEA]"
     Region          <29..178
                     /region_name="ArsB_NhaD_permease"
                     /note="Anion permease ArsB/NhaD. These permeases have been
                     shown to translocate sodium, arsenate, antimonite, sulfate
                     and organic anions across biological membranes in all
                     three kingdoms of life. A typical anion permease contains
                     8-13 transmembrane helices...; cl21473"
                     /db_xref="CDD:473875"
ORIGIN      
        1 emsaslvgse mcirdraatc aalllavagr grvistrrvl reapwqivvf slgmylvvyg
       61 lknagltdll aqllnrlaeh gvwaaalgtg llsaalssvm nnmpsvllga lsiqasdtag
      121 avreamiyan vigcdlgpki tpigslatll wlhvlarkgm ritwgyyfrv galltlpvll
      181 atlsalalrl ai
//
LOCUS       WP_258050906             281 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258050906
VERSION     WP_258050906.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>281
                     /product="phosphopantetheine-binding protein"
     Region          <4..86
                     /region_name="AcpA"
                     /note="Acyl carrier protein/domain [Lipid transport and
                     metabolism, Secondary metabolites biosynthesis, transport
                     and catabolism]; COG3433"
                     /db_xref="CDD:442659"
     Region          104..>281
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mdlppdsrta lrdwlteqla dllgepladv raladdddll gcgldsirlm ylqerlrarg
       61 stldfaqlaq rpclgawldl lacadrlsap atvalpaaqd rdqpfelssv qqaywlgrga
      121 gevlgnvsch aflefrardv dpqrlaaaae cvrqrhpmlr arffdgrqqi lptpplscfd
      181 lqdwrtlqvd eaerdwqalr dwraheclav ergqvfllgl vrmpggedrl wlsldllaad
      241 veslrlllae lgvaylaper laeppalhfa dylarraaqr a
//
LOCUS       WP_258050947             132 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258050947
VERSION     WP_258050947.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 132)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>132
                     /product="PfkB family carbohydrate kinase"
     Region          <19..119
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
     Site            order(43,79,106,109..110,113)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238177"
ORIGIN      
        1 vepewlgell rrlrrlglkv afdssgaalr egvkaapwmi kpnveeladl csapmddlva
       61 qrqaaerlrh dgvgqvvisq gaagvnwfaa egawqarppa vevastvgag dsllagmlhl
      121 slihiseptr la
//
LOCUS       WP_258050958             285 aa            linear   BCT 02-MAR-2025
DEFINITION  MATE family efflux transporter, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258050958
VERSION     WP_258050958.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01554.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..285
                     /product="MATE family efflux transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <1..268
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 aillttnrsn ialvlwfvhg ldwgvqgaar asvlaewsga llglaltrrd larrpgraqw
       61 qrlrhwlswl pllmvnrdif irslalqlvf flltvqgtrl gdatvaanal llngllltsy
      121 aldglahave alcghaigar draalrralv vaggwsllas lafaalfalf ghlfidlqsd
      181 iagvrevaya ylpylaclpl lgmwsylldg lfigatrare mrnamllava aslplgwllq
      241 glgnhglwla flafmllrgl vlaaygwrlt rrngwfaaqg adsgr
//
LOCUS       WP_258050977             105 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258050977
VERSION     WP_258050977.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 105)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>105
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
     Region          4..105
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(83..86,88)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 mlgcqqalel edipcigvgs aeealqrvdr dfagivvsdi rlpgidgltl lerlksldps
       61 lpvvlitghg dismavqamh agaydfmekp fsperlveva rrale
//
LOCUS       WP_258051002              89 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258051002
VERSION     WP_258051002.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 89)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..89
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <1..73
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 pqllsddlgt lrqavlegvg igglplcvvs rdlaerrlvr vlpewtpveg mvvamfpsrr
       61 gllpsvrali dflaagfada aqrqypapg
//
LOCUS       WP_258050985             276 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258050985
VERSION     WP_258050985.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 276)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 276)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 276)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 276)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..276
                     /product="ATP-binding protein"
     Region          <2..265
                     /region_name="PRK10337"
                     /note="sensor protein QseC; Provisional"
                     /db_xref="CDD:182388"
ORIGIN      
        1 allwlgtgqg laplkrirda ltrrgadsle plelaalpse lkplvetqnq lfqriaqaie
       61 rerrltgdaa helrspltai kthlqvarmt egaaaeqala haeegadrlh rtldqlllla
      121 rvegslsfdd gvqcsaedaa rvamhdaghg dvrmfelkla dglseaplev psvlaiaalr
      181 nlldnalrht aagtrvelav etaqgcarfh vrdhgpgiae tdlphltrrf wrhgksggsg
      241 lglaivqaiv qrcqcrldfd sradglrvtl emplre
//
LOCUS       WP_258051009             471 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258051009
VERSION     WP_258051009.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 471)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 471)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 471)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..471
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
     Region          <42..341
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(75,77,108,110,323..325,327,329)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 pggtrgvlqe tgcrrvlame gtpievrrtd qrvqreiveq ratrtlrrfg apelverylp
       61 slasrdfdel fqgamfmteq aagsdvartr tvareqggew klygdkwfcs npdadlamvl
      121 arpegapegm kgvtlfllpk vredgtrnay rivrlkdklg srsmasgevr legasaylig
      181 eigrgfqqma dmvnmsrlsn gvraaglmrr alsealfvar hrrafgkhli dmplmqkqll
      241 kmmlpteqar smfmqiatll pradggevea qkcvriltpl ikfracrdar rvtgdamevr
      301 ggvgyieews dprlvrdahl gsiwegtsni valdvaravs reqaleplqr hlrrllddsd
      361 lpgdardlfd ellvrvvatm advaerrqde qvrqagsaly hlctaifmaw easrqapdqr
      421 rlalaflvaq hkllprdplh legwtdqael larvvgevpl sqaeamqllp a
//
LOCUS       WP_258051028             145 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase zinc-binding domain-containing protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258051028
VERSION     WP_258051028.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14319.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>145
                     /product="transposase zinc-binding domain-containing
                     protein"
     Region          27..>145
                     /region_name="transpos_IS91"
                     /note="IS91 family transposase; NF033538"
                     /db_xref="CDD:468069"
ORIGIN      
        1 mpsahtgsry arhapertll yawveahypd fiarieaegr slpgyvreaf daylrcgvle
       61 hgflrvvceh craerlvafs ckkrgfcpsc garrmaesar hlvdevfgpr pvrqwvlsfp
      121 yplrflfask peaigpvlgi vhrvi
//
LOCUS       WP_258051053             158 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258051053
VERSION     WP_258051053.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..158
                     /product="phosphopantetheine-binding protein"
     Region          <5..147
                     /region_name="entF"
                     /note="enterobactin non-ribosomal peptide synthetase EntF;
                     PRK10252"
                     /db_xref="CDD:236668"
ORIGIN      
        1 vgalapglgl daaalqagle qrlpqamrpe rlwclpslpl ngngkvdrrr laesmtralg
       61 ecrhepsaee pleaheqala ecweavlkrp vrrreasffs lggdsllatr llagirerfg
      121 vrlgmadfyr qptlaglarh lqaqtveiee tqleegvl
//
LOCUS       WP_258051067             257 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphoenolpyruvate-utilizing N-terminal domain-containing protein,
            partial [Pseudomonas aeruginosa].
ACCESSION   WP_258051067
VERSION     WP_258051067.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017346.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05524.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>257
                     /product="phosphoenolpyruvate-utilizing N-terminal
                     domain-containing protein"
                     /GO_process="GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
     Region          8..>238
                     /region_name="PtsA"
                     /note="Phosphoenolpyruvate-protein kinase (PTS system EI
                     component in bacteria) [Carbohydrate transport and
                     metabolism]; COG1080"
                     /db_xref="CDD:440698"
ORIGIN      
        1 paavagtlag vcaspglasg plarlgaisl paddgrhrpe eqhlaldqal qrvrddvqgs
       61 lqqarlggde neaaifsahl alledpglld aadmlidqgv gaahawhrai qaqceilqal
      121 gnlllaeran dlrdlekrvl rvllgdtapl rvpagaivaa reitpsdlap lvdagaaglc
      181 maeggatshv ailarskglp clvalgagll eleegrqvvl dagqgrlels pdarrleqva
      241 lqvaqreeqr rrqqada
//
LOCUS       WP_258051070             183 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY-family carbohydrate kinase, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258051070
VERSION     WP_258051070.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 183)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 183)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02782.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>183
                     /product="FGGY-family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <1..183
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 vaggggdnml aaigtgnirp glltaslgts gtlsayaerp lvsphgelat fcassggwlp
       61 lactmnltga cglvqdllhl dldefsrlaa qapvgaegll mlpffdgerv palpyasasl
      121 hgmtaanlsr anlcravleg tafglrygld llrasglpge eirlvggaak splwrrtlad
      181 llg
//
LOCUS       WP_258051088             182 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258051088
VERSION     WP_258051088.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 182)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>182
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          1..>182
                     /region_name="PRK07524"
                     /note="5-guanidino-2-oxopentanoate decarboxylase"
                     /db_xref="CDD:236041"
ORIGIN      
        1 mttcgeflvk qleawgvetv fgipgvhtve lyrglpgsri rhvtphheqg agfmadgyar
       61 vtgkpgvcfi itgpgmtnil tamaqayads ipmlvissvn erarlahgng ylhelpnqrn
      121 lvgnvcafsh tlmsaeelpa vlarafavfd serprpvhie lpldvitapa ehlalrprtv
      181 as
//
LOCUS       WP_258051092             252 aa            linear   BCT 02-MAR-2025
DEFINITION  lyase family protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258051092
VERSION     WP_258051092.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00206.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..252
                     /product="lyase family protein"
     Region          <1..245
                     /region_name="PRK09053"
                     /note="3-carboxy-cis,cis-muconate cycloisomerase;
                     Provisional"
                     /db_xref="CDD:181627"
ORIGIN      
        1 eqalpvaaal aeelglalpe qpwhtqrdrl vefasvlglv agslgkfgrd vsllmqteag
       61 evfepagagr ggsstmphkr npvssavlia aatrapglvs tlfaampqeh erslglwhae
      121 wetlpelccl vsgalqqaig lleglevdaq rmrrnlglth glvlaeavsi alarrigrea
      181 ahhlveqccr raveqrrelr avlgeearvs aelsgdeldr lldpahylgq arawverala
      241 ehhalgfeph pa
//
LOCUS       WP_258051090             163 aa            linear   BCT 02-MAR-2025
DEFINITION  protein-disulfide reductase DsbD domain-containing protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258051090
VERSION     WP_258051090.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 163)
  AUTHORS   Bushweller,J.H.
  TITLE     Protein Disulfide Exchange by the Intramembrane Enzymes DsbB, DsbD,
            and CcdA
  JOURNAL   J Mol Biol 432 (18), 5091-5103 (2020)
   PUBMED   32305461
REFERENCE   2  (residues 1 to 163)
  AUTHORS   Smith,R.P., Whitten,A.E., Paxman,J.J., Kahler,C.M., Scanlon,M.J.
            and Heras,B.
  TITLE     Production, biophysical characterization and initial
            crystallization studies of the N- and C-terminal domains of DsbD,
            an essential enzyme in Neisseria meningitidis
  JOURNAL   Acta Crystallogr F Struct Biol Commun 74 (Pt 1), 31-38 (2018)
   PUBMED   29372905
REFERENCE   3  (residues 1 to 163)
  AUTHORS   Goulding,C.W., Sawaya,M.R., Parseghian,A., Lim,V., Eisenberg,D. and
            Missiakas,D.
  TITLE     Thiol-disulfide exchange in an immunoglobulin-like fold: structure
            of the N-terminal domain of DsbD
  JOURNAL   Biochemistry 41 (22), 6920-6927 (2002)
   PUBMED   12033924
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022853.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11412.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>163
                     /product="protein-disulfide reductase DsbD
                     domain-containing protein"
     Region          18..>160
                     /region_name="dipZ"
                     /note="thiol:disulfide interchange protein precursor;
                     Provisional; PRK00293"
                     /db_xref="CDD:234717"
ORIGIN      
        1 mrvlilllml llpglsqaqp gddlfaprga tqtdflpvek afrftwerld dgqvqlrwqi
       61 apgyylyqkr lrfdgldpal qpqlppgesh sdeffgesqv yrqsleltlp aaaagqlrlg
      121 wqgcadaglc yppqsqaldl ggtgpaaava gtsgevaedq gla
//
LOCUS       WP_258051093              88 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258051093
VERSION     WP_258051093.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 88)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..88
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <1..68
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 prlldlgmtl eaaangqgva larpslaraw laegrlvvlf plrsapthhy hlrshqaspa
       61 sqrfaawlaa icreavvqgr eflpaadd
//
LOCUS       WP_258051107             293 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258051107
VERSION     WP_258051107.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 293)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>293
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <4..86
                     /region_name="AcpA"
                     /note="Acyl carrier protein/domain [Lipid transport and
                     metabolism, Secondary metabolites biosynthesis, transport
                     and catabolism]; COG3433"
                     /db_xref="CDD:442659"
     Region          104..>293
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mdlppdsrta lrdwlteqla dllgepladv raladdddll gcgldsirlm ylqerlrarg
       61 stldfaqlaq rpclgawldl lacadrlsap atvalpaaqd rdqpfelssv qqaywlgrga
      121 gevlgnvsch aflefrardv dpqrlaaaae cvrqrhpmlr arffdgrqqi lptpplscfd
      181 lqdwrtlqvd eaerdwqalr dwraheclav ergqvfllgl vrmpggedrl wlsldllaad
      241 veslrlllae lgvaylaper laeppalhfa dylarraaqr aeaaarardy wle
//
LOCUS       WP_258051118              99 aa            linear   BCT 02-MAR-2025
DEFINITION  major capsid protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258051118
VERSION     WP_258051118.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 99)
  AUTHORS   Tarafder,A.K., von Kugelgen,A., Mellul,A.J., Schulze,U.,
            Aarts,D.G.A.L. and Bharat,T.A.M.
  TITLE     Phage liquid crystalline droplets form occlusive sheaths that
            encapsulate and protect infectious rod-shaped bacteria
  JOURNAL   Proc Natl Acad Sci U S A 117 (9), 4724-4731 (2020)
   PUBMED   32071243
REFERENCE   2  (residues 1 to 99)
  AUTHORS   Welsh,L.C., Symmons,M.F. and Marvin,D.A.
  TITLE     The molecular structure and structural transition of the
            alpha-helical capsid in filamentous bacteriophage Pf1
  JOURNAL   Acta Crystallogr D Biol Crystallogr 56 (Pt 2), 137-150 (2000)
   PUBMED   10666593
REFERENCE   3  (residues 1 to 99)
  AUTHORS   Marvin,D.A., Hale,R.D., Nave,C. and Helmer-Citterich,M.
  TITLE     Molecular models and structural comparisons of native and mutant
            class I filamentous bacteriophages Ff (fd, f1, M13), If1 and IKe
  JOURNAL   J Mol Biol 235 (1), 260-286 (1994)
   PUBMED   8289247
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017194.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05356.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..99
                     /product="major capsid protein"
     Region          44..99
                     /region_name="Phage_Coat_B"
                     /note="Inovirus Coat protein B; pfam05356"
                     /db_xref="CDD:428438"
ORIGIN      
        1 glsdradhrs vcrsfqrhhr akstqvtgvs kmqkmkqlmv rggvvlgslg llagqamaev
       61 paeatasltq akadgvaigg ivlgviiaia afkyirral
//
LOCUS       WP_258051130             186 aa            linear   BCT 02-MAR-2025
DEFINITION  iron chelate uptake ABC transporter family permease subunit,
            partial [Pseudomonas aeruginosa].
ACCESSION   WP_258051130
VERSION     WP_258051130.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013219.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01032.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>186
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
     Region          83..>171
                     /region_name="FepG"
                     /note="ABC-type enterobactin transport system, permease
                     component [Inorganic ion transport and metabolism];
                     COG4779"
                     /db_xref="CDD:443810"
ORIGIN      
        1 lwldqgmasl lrpgleptlf ersrvlldaa atrlperivv qalddgllpa ehlgrydrvi
       61 sfaalhayea sreglalaaa llgtgslalg paevfasllg qgqdptaqri vqrvrlprvl
      121 taclvgaalg magaifqsis rnplgspdvi gfttgaasga ivqiilfdag platslaala
      181 aglcta
//
LOCUS       WP_258051133             162 aa            linear   BCT 02-MAR-2025
DEFINITION  thioesterase domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258051133
VERSION     WP_258051133.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 162)
  AUTHORS   Schneider,A. and Marahiel,M.A.
  TITLE     Genetic evidence for a role of thioesterase domains, integrated in
            or associated with peptide synthetases, in non-ribosomal peptide
            biosynthesis in Bacillus subtilis
  JOURNAL   Arch Microbiol 169 (5), 404-410 (1998)
   PUBMED   9560421
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013166.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00975.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>162
                     /product="thioesterase domain-containing protein"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <1..157
                     /region_name="EntF2"
                     /note="Thioesterase domain of type I polyketide synthase
                     or non-ribosomal peptide synthetase [Secondary metabolites
                     biosynthesis, transport and catabolism]; COG3319"
                     /db_xref="CDD:442548"
     Region          <66..>134
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 vlvheglgtl lpyrpllrgl gegrpllgla vhdsdaylai paehlnaclg rryaealhga
       61 glrevdllgy csgglvalet akslvqrgvr vrqldivssy ripyrvdder lllfsfaatl
      121 gldtaalgfp aperlglvvq aalaqtperl gaealaglpg la
//
LOCUS       WP_258051366            4141 aa            linear   BCT 02-MAR-2025
DEFINITION  hemagglutinin repeat-containing protein [Enterobacter asburiae].
ACCESSION   WP_258051366
VERSION     WP_258051366.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter asburiae
  ORGANISM  Enterobacter asburiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024728.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13332.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4141
                     /organism="Enterobacter asburiae"
                     /db_xref="taxon:61645"
     Protein         1..4141
                     /product="hemagglutinin repeat-containing protein"
                     /calculated_mol_wt=417842
     Region          37..291
                     /region_name="TPS"
                     /note="TPS secretion domain; pfam05860"
                     /db_xref="CDD:461762"
     Region          311..330
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          332..351
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          351..2048
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          353..374
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          376..393
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          395..414
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          417..436
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          438..457
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          459..478
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          501..519
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          521..537
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          539..560
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          562..581
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          595..613
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          615..632
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          634..653
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          655..672
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          675..694
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          696..714
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          715..745
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          848..866
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          871..890
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          903..921
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          922..940
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          941..957
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          959..979
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          981..999
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1001..1016
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1018..1037
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1039..1056
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1059..1075
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1076..1095
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1096..1114
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1116..1137
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1153..1170
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1190..1209
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1211..1228
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1230..1246
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1247..1266
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1268..1285
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1287..1305
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1306..1324
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1325..1343
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1363..1381
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1383..1401
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1403..1422
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1424..1438
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1440..1458
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1477..1496
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1498..1515
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1517..1534
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1536..1553
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1543..3197
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          1556..1574
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1575..1593
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1612..1631
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1633..1652
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1654..1683
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1684..1703
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1705..1723
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1726..1742
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1743..1762
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1765..1800
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1802..1821
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1824..1841
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1843..1861
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1863..1887
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1889..1909
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1936..1955
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1957..1974
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1976..1995
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          1997..2014
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2016..2034
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2036..2055
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2057..2075
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2077..2096
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2098..2115
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2117..2142
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          2144..2163
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          3284..3459
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          4006..4141
                     /region_name="CDI_toxin_EC869_like"
                     /note="Zn-dependent DNAse of the contact-dependent growth
                     inhibition (CDI) system of Escherichia coli EC869, and
                     related proteins; cd13444"
                     /db_xref="CDD:259837"
     Site            order(4031,4033..4035,4039,4044,4087..4090,4092..4094,
                     4096,4098..4099)
                     /site_type="inhibition"
                     /note="inhibitor binding site [polypeptide binding]"
                     /db_xref="CDD:259837"
ORIGIN      
        1 mdtrhppvrf sqrliswivc glmvwqpvap avaaaltpag qttvdragng vpvvniatpn
       61 gagishnqfg eynvgsegli lnngtdrltr tqlggliqnn pnlqagreak giinevtgas
      121 rsqlqgytev agkaanvmva npygitcngc gfintpnvtl ttgkpqfdas gnllalevtk
      181 gaitvegqgl dasksdalsl iaratevnaa ihandltvta ganrvgadgs vrpvagegaa
      241 pvvavdtgal ggmyanrirl vsseagvgvn lgnltarqgd iqldaggklt vrnslasgsi
      301 sakgagvals gshqaggaln vassqdmeln nstlasqgdm rlsaagkvqm tgggtnsaga
      361 lavssgqamt lsntslisrg aatldsqdtl tvngggvsaq ggaltvaggq gvalsdatlt
      421 gqgdttlstg gsltqrggsv tgrgalsvaa gkditltntr sgsdtratls sggtlsstgs
      481 avsageslal sggqlvldgq sradaaadir ltgstvsnqg qvnagrdial sgdrvsssgl
      541 laakgrldvn ageltnggta qgsdvtlkgq tvtnsgtlqs agnlalsagt laqrgtlsak
      601 gnanvtaqqt lrndgsllad gamnvtagvl eqngtlsgat altaqagtlt sgqasrttsq
      661 gniqitatrs aslngqtdaa gavtvsagdl ttgpdahlqs gqgltlqaqs aalngtqaak
      721 galsvtagti ahagkstgda lsfnasgdlt sggeltagai tlsgqnilqs gaakadrmtl
      781 tapgritssg slvagtlsld aasvenggll qgttllglkt gsltnlaggs vysaqdltln
      841 vpvlanrgli ttdgtlrikg dtltnqgein gvslssdyls ltssgrllad drltlngttl
      901 vnagsiaagd lhitadslen qgtvegdaal tlgvadltnr galrsggtlt lsgdtltssg
      961 elsatallln ltrqvsneag grviardglt ltaasltnsg lmagadaqfn sasvtnggtl
     1021 qgtrsltatg aqlsnlqagm llsggalglh httlnnaglm qgntlnlatg ewmntgnalg
     1081 eagvtaavtg altnsgkvls qqaldvqagn tdnrgqllak vltlrgdlqn sgllqgsstl
     1141 awsgntfanq tqgqvtgget ltlsghtlsn agslqgrsat ldaaglnnqg svqaldaltl
     1201 aatgrldntg allsqnlftl taaqlfndgr lagkaltvna aqltntgmlq gndtlalttr
     1261 alsngatgql vsgsglnlsl dtldnaglll vnggftlrgs dltnrgdiqa qdldlglgna
     1321 lsntgnivat gdaalhattl tssgtvagrt ltagatelrn sglmqgssav naaadrfina
     1381 lngkwlsggg ftltggqltn agtlqgatld mtgttltssg tvnglaglsg tlggaltntg
     1441 llqsggattf tadtlanpgr itggtlslta remnndglmq gtnglaltgt alttgaasrt
     1501 lsggmltlda gqlttqgtlq gngadiratg dwthggslls qgaltaatgg tltssgslms
     1561 qgraditaqt ldnrgqllse gdvtlggstl knsgtvqgnt lglrqdsinn qgtltglqsl
     1621 tvqgqqrlma rmamaapqqa lingaggrll tqgaltiasg avtnagswqa qnillnaqsl
     1681 snsgtvqsad glqmtladtl tgttgskita lgsatlqaat lanqgqwaak nltltggtls
     1741 nsgaisgvng ltlsqtgavs qqstgtllsg galnvtaasv tsdgkmqgst lgittgaltn
     1801 ggrlqgdnga tlalsgtltn ssggeivsrd gltlttpalf nygliqggge trvtassqar
     1861 ndgrllsgar ltlgtpqftg tgwlqatdli lnaanatngg twvadratlt gttftsqgtt
     1921 qagqltvnyg qltnsgtllg naklnidadq vtqsaggrll sggnlwlqsr gldltgqlvs
     1981 lgdltlqltn aftsrtavaa grtltissgg didnrsvlqg qavnlsaggq lsnngqittg
     2041 ggtstlsgss valnaagsvq gggditvasr snitvdgftg trgsltlsap gaivntally
     2101 aannlalfad sitnrrgdim agnnlwmqrd aagnansqvv ntsgnietqg gditirtgsl
     2161 lnqrdgltst tttsaspayg wvgqatvdip vsvlgidtlv rdkystythe gsgtcggvpc
     2221 flyedthyyy kpitgyetrk yalnqiaqvv naeggsaris sgrnltitaa elnnqasail
     2281 ansnitlagn tlnnqsyqsg tyteyavyky vspsygggsp gsyspthrnt yydndvtyvl
     2341 dghvteseng etfraviqag gnvtanftsn isntnttana ggvsnvispp slntlsnqti
     2401 gsgvqkqgln aagsvavtsp qwndrlqgal qqlngggale nggasgtpls nvattqkgda
     2461 nlgqlgalan agvttadlrt aqggavghyq gqrvdtsayp lpsgnngyfv fsdnpkspyl
     2521 iginpklngl gqldpalfad lnamlgikps stapqetrla ftdekqflgs symlgrlnln
     2581 pdydyrflgd aafdtryvsn vvlnqtgnry lngigsdldq mrylmdnaaa aqqslglqfg
     2641 vsltadqiaa ldrsllwwek atvngetvmv pklylspkdv tvnngsviag nnvtlkggsi
     2701 tnggstllak nsltldsqns isnlnsglmk aggdlnlsai gdinnissti sgktvalesl
     2761 dgsinnltqv eqidinaggk ygniglkdtl lgntasitaq dglsleagkn itvtganlss
     2821 ggdmllnawg diavnanqin dafsssrekt srssvtyqgs nvtaggnllv naghnldvta
     2881 sdlkaggsag lsagndlnln aeqtsessrk gkseshstgl drttisagdn lvlkagqdin
     2941 aqaaalaaek svglqagrdv nlaaeettqg dsyrsgkktv inesvrqqgt eiasgentqi
     3001 lagrdvttea aqvtakgdig vaagrdvsln tatesdyhyk eqtktkkgfl skktthtiee
     3061 dsatresgsl lsgdnvqvva gnnllvngsa vagdgdvqlk agnnvdivaa tnsdtswrfk
     3121 eekksglmgs ggigftigss ksthdlrekg ttqsqsfstv gstggnvais agnqahvgga
     3181 dliagkdlsl sgdsviiepg hdrrtrdetf eqkksgltva lsgtvgsain navsaaqetk
     3241 eqsdgrlkal qatktvlsgv qagqaadmaa ttgdpnamgv slslttqksk sqqhaesdav
     3301 agstlnagnn lsitangknk gansgdivia gsqlkaggdt tldaqndill sgaantqkts
     3361 gknsssgggi gvsigaggng agisvfanvn aahgkdkgng tdwtettids gknvtlksgh
     3421 dtvldgaqvn gnkivadvgh dllmrsqqnn sdydskqtsv aaggsftfgt msgsgyinas
     3481 qdkmksrfds vaeqtglyag dggfditvgh htqldgavia statpdknsl dtgtlgfsdi
     3541 hneadfktsh sgislsgggs fgdkfqgnlp ggmisaagnk ghkegttqaa vaegsltird
     3601 kanqkqdvae lsrdtehand sispifdkek eqnrlnavgm isdigsqvad iartqgdlng
     3661 lkaaqketgv tlpanatekq rqdylaklrd tqayknvmvt ygtgsdmqrg iqaataalqg
     3721 laggniggal agasapelan iighhagidd ntaakaiaha ilggvtaalq gnsaaagavg
     3781 aasgeliata iarqfypdtd psklteeqkq tvstlasvsa giaggiaggn tagaaagasa
     3841 gknsvennyl sstqavafdk elsecrksgg dcqaiidkwk kvsdeqsatv dellkddplt
     3901 avgwnkevae ggydmterpg wlgnigadvm tsdeaktyvq qwngqdlaki dqnspewmky
     3961 avfasdpenq amlvsggllv kditkaalsf msrntatatv kaselgmqwg qgnikqgmpw
     4021 edyvgsslps sarlpqnfkt fdyydvstkt avsaksldtq tmaklanpnq iyssikgnid
     4081 aaakfdtytl srktidssmi anrevqlavp atttktqwte inraieygks qgvtvkvtqv
     4141 k
//
LOCUS       WP_417281903             124 aa            linear   BCT 02-MAR-2025
DEFINITION  hypothetical protein [Bacillus salitolerans].
ACCESSION   WP_417281903
VERSION     WP_417281903.1
KEYWORDS    RefSeq.
SOURCE      Bacillus salitolerans
  ORGANISM  Bacillus salitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Bacillus salitolerans"
                     /db_xref="taxon:1437434"
     Protein         1..124
                     /product="hypothetical protein"
                     /calculated_mol_wt=13210
     Region          <49..>94
                     /region_name="PRK12804"
                     /note="flagellin; Provisional"
                     /db_xref="CDD:183759"
ORIGIN      
        1 mnnedtgaig gfdadggave taktvvgdte iyeenplkkf niiwpsdsan ckglnfqlga
       61 nsgqkmtmff ssttskslgi dnidvkngaq haislfnsai egslfkafll wgitkqirsr
      121 dvsk
//
LOCUS       WP_258051652             289 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing
            protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258051652
VERSION     WP_258051652.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 289)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02737.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>289
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /GO_function="GO:0070403 - NAD+ binding [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
     Region          1..>286
                     /region_name="PRK08268"
                     /note="3-hydroxy-acyl-CoA dehydrogenase; Validated"
                     /db_xref="CDD:236211"
ORIGIN      
        1 mseppivlig ivgtgamgqg iaqlaacagl svllydsrqg aalqareqia tvlarqverg
       61 rleaeavera mgnlrvvedl rvlggcqlvi eaivenleak qalfrqleev vgdeailasn
      121 tsslsvtaia sacrdpgrva glhffnpvpl mrlvevidgl atrtgiaerl calvatfghq
      181 svratdspgf ivnhagrafg tealrilgeg vapvaaidev lregagfrmg pfelfdlvgl
      241 dvslpvmesi yrqyyeepry rphpllrqml aagrlgrksg qgsvsyihl
//
LOCUS       WP_258051660             125 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Pseudomonas aeruginosa].
ACCESSION   WP_258051660
VERSION     WP_258051660.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 125)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..125
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=13822
     Region          <2..117
                     /region_name="EAL"
                     /note="EAL domain. This domain is found in diverse
                     bacterial signaling proteins. It is called EAL after its
                     conserved residues and is also known as domain of unknown
                     function 2 (DUF2). The EAL domain has been shown to
                     stimulate degradation of a second...; cl29561"
                     /db_xref="CDD:453023"
ORIGIN      
        1 mtfeitesad gdackivkgl erlnlkampv mlddlrdgfa krqllmnrav tgcklsrrtt
       61 rdiaespavr geveklvrdc raagkrvvle giedaaelei araleiefcq gfyfgrpalp
      121 eylfg
//
LOCUS       WP_258051686             395 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258051686
VERSION     WP_258051686.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 395)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 395)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 395)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 395)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>395
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          9..>252
                     /region_name="Uup"
                     /note="ATPase components of ABC transporters with
                     duplicated ATPase domains [General function prediction
                     only]; COG0488"
                     /db_xref="CDD:440254"
ORIGIN      
        1 mtntstltld gvsfqlpdgs llfsdldetf dtrhtglvgr ngvgksllar llaghlqpss
       61 gsvrrqgrvr ylaqqldpae yptvadlagv rpwlealari eagslddady eclgerwdir
      121 qrladalaae glghlradtp serlsggecm rvallgafld dadflildep snpldgpara
      181 llrarlaawd gglllvshdr ellegmqriv elstlglrsy gggysfyaqs reeareaaer
      241 rldqrrlerk rqtlamreqq qrqerrqasg rregktanqa killggfrer sevsagklrn
      301 ahqaererld revreaarev eeasplllds pdaelaaqrr ivelkgavlp hlrlslihis
      361 eptrhslnsd avfclkkkse dnislnrqmd eqgrg
//
LOCUS       WP_258051716              87 aa            linear   BCT 02-MAR-2025
DEFINITION  MATE family efflux transporter, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258051716
VERSION     WP_258051716.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01554.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>87
                     /product="MATE family efflux transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          1..>81
                     /region_name="PRK00187"
                     /note="NorM family multidrug efflux MATE transporter"
                     /db_xref="CDD:166843"
ORIGIN      
        1 msspslvelk ailrlagpli aaqlayvamv ftdtvmmgkl gpdalaaggl gavsyafvst
       61 fcvgvvaavg nlvairhgcd dlslihi
//
LOCUS       WP_258051746             127 aa            linear   BCT 02-MAR-2025
DEFINITION  enoyl-CoA hydratase-related protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258051746
VERSION     WP_258051746.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012596.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00378.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..127
                     /product="enoyl-CoA hydratase-related protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <16..127
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
ORIGIN      
        1 seclvgsemc irdralpwlv gegwakrmil cnervdaeta lriglveqvv dsgeargaal
       61 llaakvarqs pvairtikpl iqgarerapn twlpeererf vdlfdaqdtr egvnaflekr
      121 dpkwrnc
//
LOCUS       WP_258051752             185 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258051752
VERSION     WP_258051752.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 185)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..185
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <7..180
                     /region_name="PRK07092"
                     /note="benzoylformate decarboxylase; Reviewed"
                     /db_xref="CDD:235931"
ORIGIN      
        1 mcirdrggpl rpetvfdvvd alaprdaifv keststvtaf wqrvemrepg syffpaaggl
       61 gfglpaavga qlaqprrqvi giigdgsany gitalwsaaq yrvpavfiil kngtygalrw
      121 fagvlevpda pgldvpgldf caiargygve alhaatreel egalkhalaa drpvlievpt
      181 qtiep
//
LOCUS       WP_258051771             304 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258051771
VERSION     WP_258051771.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>304
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <6..116
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
     Region          104..>298
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 dvykrqiwks vlkrpaigvs dnffqvggds irliqmqvma rqaglaftlr dvfnhqsire
       61 larllaapas padalgtsap qtlepfalls aaerkrlpeg lddaypmtsl qqgmllqsea
      121 sgdprllhnv vlhevhgrld gellarawai ligrhailrt gfdlhggqap lqwvhpatav
      181 aaevpvhdlr gldeearrlr lrawieeeqa tpfdwsrppl vrlaalalde rrfalgvaeh
      241 hsvldgwslq slvdellavy adllagvvar eaeapavgfr dyvalereae anagsalfls
      301 lihi
//
LOCUS       WP_258051785             142 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY-family carbohydrate kinase, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258051785
VERSION     WP_258051785.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 142)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 142)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02782.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>142
                     /product="FGGY-family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <1..141
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 aslgtsgtla ayaerplvsp hgelatfcas sggwlplact mnltgacglv qdllhldlde
       61 fsrlaaqapv gaegllmlpf fdgervpalp hasaslhgmt aanlsranlc ravlegtafg
      121 lrygldllra sglpgeeirl sa
//
LOCUS       WP_258051800              64 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfocyanin-like copper-binding protein [Mesorhizobium sp. INR15].
ACCESSION   WP_258051800
VERSION     WP_258051800.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium sp. INR15
  ORGANISM  Mesorhizobium sp. INR15
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 64)
  AUTHORS   Komorowski,L. and Schafer,G.
  TITLE     Sulfocyanin and subunit II, two copper proteins with novel
            features, provide new insight into the archaeal SoxM oxidase
            supercomplex
  JOURNAL   FEBS Lett 487 (3), 351-355 (2001)
   PUBMED   11163357
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018257.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06525.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..64
                     /organism="Mesorhizobium sp. INR15"
                     /db_xref="taxon:2654248"
     Protein         1..64
                     /product="sulfocyanin-like copper-binding protein"
                     /GO_function="GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=6553
     Region          <24..63
                     /region_name="COG4454"
                     /note="Uncharacterized copper-binding protein,
                     cupredoxin-like subfamily [General function prediction
                     only]"
                     /db_xref="CDD:443552"
ORIGIN      
        1 msdpltalas sgedkagdkg evseldpdks gtltvdlkag kyllicnvpg hygagmwaef
       61 tvep
//
LOCUS       WP_258051872             346 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258051872
VERSION     WP_258051872.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 346)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..346
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
     Region          <1..314
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
ORIGIN      
        1 vvfkahsghm ataervaaai lraaertgmp agvfnmiygg gvgerlvrhp aiqavgftgs
       61 lkggralcdm aaaraqpipv faemssinpv vllpaalkkr geavadelsa svvlgcgqfc
      121 tnpglvigir saqfsafler faarmddqpa qtmlnagtla syekglaalh ahprvrhlag
      181 qpqegrqarp qlfqadvsll legdellqee vfgpasvvve vadhaelkra lhglhgqlta
      241 tliaeaedla sfadlvplle qkagrlllng yptgvevcda mvhggpypat sdargtsvgt
      301 laidrflrpv cyqnypdawl pealkdgnpl giarlvdgve traaid
//
LOCUS       WP_258051894             180 aa            linear   BCT 02-MAR-2025
DEFINITION  dTDP-4-dehydrorhamnose 3,5-epimerase family protein [Mesorhizobium
            sp. INR15].
ACCESSION   WP_258051894
VERSION     WP_258051894.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium sp. INR15
  ORGANISM  Mesorhizobium sp. INR15
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013103.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00908.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Mesorhizobium sp. INR15"
                     /db_xref="taxon:2654248"
     Protein         1..180
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase family
                     protein"
                     /GO_function="GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA]"
                     /calculated_mol_wt=19820
     Region          27..>165
                     /region_name="dTDP_sugar_isom"
                     /note="dTDP-4-dehydrorhamnose 3,5-epimerase; cl46642"
                     /db_xref="CDD:480982"
ORIGIN      
        1 mnddrkppeg wmavgtpdrq tvtpdwmaid sppidgvkik eikpvatsng ylteifrdew
       61 eldsspvgqv fqrtlypgav tgwhahavtl drlfccigsi rvslydgrka spsfgtvwhk
      121 ilgpsrpaiv iippgvwhgv ialgpetall lnlvdkayay dapdhwrlpp dtdhiphklv
//
LOCUS       WP_258051964             194 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258051964
VERSION     WP_258051964.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 194)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>194
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          1..>180
                     /region_name="PRK07092"
                     /note="benzoylformate decarboxylase; Reviewed"
                     /db_xref="CDD:235931"
ORIGIN      
        1 mktvhsasye ilrrhglttv fgnpgsnelp flkdfpedfr yilglhegav vgmadgfala
       61 sgrpafvnlh aaagtgngmg altnawyshs plvitagqqv rsmigveaml anvdagqlpk
      121 plvkwshepa caqdvprals qaiqtaslpp rapvylsipy ddwaqpapag vehlaarqvs
      181 glslihisep trhs
//
LOCUS       WP_258051987             589 aa            linear   BCT 02-MAR-2025
DEFINITION  pilus assembly protein TadG-related protein [Mesorhizobium sp.
            INR15].
ACCESSION   WP_258051987
VERSION     WP_258051987.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium sp. INR15
  ORGANISM  Mesorhizobium sp. INR15
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 589)
  AUTHORS   Tomich,M., Planet,P.J. and Figurski,D.H.
  TITLE     The tad locus: postcards from the widespread colonization island
  JOURNAL   Nat Rev Microbiol 5 (5), 363-375 (2007)
   PUBMED   17435791
REFERENCE   2  (residues 1 to 589)
  AUTHORS   Kachlany,S.C., Planet,P.J., Bhattacharjee,M.K., Kollia,E.,
            DeSalle,R., Fine,D.H. and Figurski,D.H.
  TITLE     Nonspecific adherence by Actinobacillus actinomycetemcomitans
            requires genes widespread in bacteria and archaea
  JOURNAL   J Bacteriol 182 (21), 6169-6176 (2000)
   PUBMED   11029439
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13400.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Mesorhizobium sp. INR15"
                     /db_xref="taxon:2654248"
     Protein         1..589
                     /product="pilus assembly protein TadG-related protein"
                     /calculated_mol_wt=59525
     Region          9..589
                     /region_name="TadX"
                     /note="Uncharacterized conserved protein, contains
                     TadX/Tad_C domain [General function prediction only];
                     COG4655"
                     /db_xref="CDD:443693"
ORIGIN      
        1 mlaqtrneis rlarlmlgdr kanfavmtal sapvalalaa vaideasiyt erreaqsivd
       61 laaitgasni nniqtavvtt ltdngmpnvv vqnagqtipa avgktvvait pgrytaatan
      121 vtqrfqagat pynavhvtlq kipnryfass liptpvigta atatmtpqat fsvgsrllsv
      181 nggilnslls sllggnisls vmdynglisa dvsvlsfisa lstqlnltaa tysdvlaska
      241 tvgqiatama nvpgvgntak lalqtiasks tstvkvplss lvdlgsvgsl glgqtpaglg
      301 vdasamgmlt aaavlangtn qaqvnlgati pgllsttlti aigepaqfsp wlsigqigtt
      361 vrtaqtrikl vasvglgnps laggisllav nvplnvevay aeakltditc ptgpssisvs
      421 iaahpgvaal hlansnssgf gdfsqpqsft daeiadvslr lllinipliq vmgsaatait
      481 nnnpttltfn atdianktik tvstrnitqs lttslvsnls lsvnllglpl ldvsallgtv
      541 kpavvallng vtapiddlly nvlsalgvgv gqadvrvtga tcgrsvlvq
//
LOCUS       WP_258052016             160 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Mesorhizobium sp.
            INR15].
ACCESSION   WP_258052016
VERSION     WP_258052016.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium sp. INR15
  ORGANISM  Mesorhizobium sp. INR15
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 160)
  AUTHORS   Ren,J., Sainsbury,S., Nettleship,J.E., Saunders,N.J. and Owens,R.J.
  TITLE     The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals
            a novel protein fold incorporating a helix-turn-helix motif
  JOURNAL   Proteins 78 (7), 1798-1802 (2010)
   PUBMED   20196080
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013540.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01381.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Mesorhizobium sp. INR15"
                     /db_xref="taxon:2654248"
     Protein         1..160
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=17285
     Region          <1..47
                     /region_name="AF2118"
                     /note="Predicted transcriptional regulator, contains an
                     XRE-type HTH domain (archaeal members contain CBS pair)
                     [Transcription]; COG3620"
                     /db_xref="CDD:442838"
     Region          74..155
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 msqialaeas gisrrmiiav eagdanisls sldklaaamg asfvdlvrdr drrsssdine
       61 vtwrgsgads tafllgtapa tnetqmwlws legserydae pdpegwhemi fvtqgvltlv
      121 lsgaekeyva gtfavfssaq lysylnrglq tvrfirnvvs
//
LOCUS       WP_258052125             196 aa            linear   BCT 02-MAR-2025
DEFINITION  HupE/UreJ family protein [Mesorhizobium sp. INR15].
ACCESSION   WP_258052125
VERSION     WP_258052125.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium sp. INR15
  ORGANISM  Mesorhizobium sp. INR15
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016819.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04955.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Mesorhizobium sp. INR15"
                     /db_xref="taxon:2654248"
     Protein         1..196
                     /product="HupE/UreJ family protein"
                     /calculated_mol_wt=19394
     Region          25..174
                     /region_name="HupE"
                     /note="Hydrogenase/urease accessory protein HupE
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG2370"
                     /db_xref="CDD:441937"
ORIGIN      
        1 msatmkrtsl sailllaaam payahvgigt tssftagsmh plsgldhmtv miavglwaal
       61 kggkaiwawp lafvgvmlag galgmlhvpv pfvepgilas vvalgllval avdlpvsagv
      121 aiiglfalfh ghahgtevpe naggleymag favvtallha vgiaaglglg rrfrdlaraa
      181 gaacaavgvg lvfgvl
//
LOCUS       WP_258052159             336 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Mesorhizobium sp. INR15].
ACCESSION   WP_258052159
VERSION     WP_258052159.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium sp. INR15
  ORGANISM  Mesorhizobium sp. INR15
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024118.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12706.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Mesorhizobium sp. INR15"
                     /db_xref="taxon:2654248"
     Protein         1..336
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=36711
     Region          78..263
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(133,135,137..138,208..209,229,263)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 mvakkkaanr yysgphsdhf dgtlffnprg kppgrftdll kwqlsggrsk wpaanpspfp
       61 qakpaermeg selrvtmvgh stlliqtagl niltdpvwsp raspfsfagp krvnppgiaf
      121 adlppidlvl vshnhydhld latlkqlkag hdplvvaplg ndaiikagvp girlspqdwg
      181 gkvdigkgav ihvepvhhws argagdrrma lwagfvvetp ggnvyfagdt gfheginyrl
      241 maekhggfrf ailpigayep rwfmapqhqn pdeavqgmrl cnaahaagch wgtfqltdep
      301 mdepalklge aldhrniprd rfralrpgev wdvpvt
//
LOCUS       WP_258052283             161 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Mesorhizobium sp. INR15].
ACCESSION   WP_258052283
VERSION     WP_258052283.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium sp. INR15
  ORGANISM  Mesorhizobium sp. INR15
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 161)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Mesorhizobium sp. INR15"
                     /db_xref="taxon:2654248"
     Protein         1..161
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=17071
     Region          <33..152
                     /region_name="PRK09191"
                     /note="two-component response regulator; Provisional"
                     /db_xref="CDD:236402"
ORIGIN      
        1 maasigvars rsdrgldqrg rrgrratrmk glrilvaede pfinimliem leemghtvca
       61 saeteeetvt aalatkpdvm ivdarlgtgs giaaveeilk safiphifas gdiltgcprd
      121 pravviqkpy resdlaraia sallgasnek palsampqat d
//
LOCUS       WP_258052330            1825 aa            linear   BCT 02-MAR-2025
DEFINITION  MBG domain-containing protein [Mesorhizobium sp. INR15].
ACCESSION   WP_258052330
VERSION     WP_258052330.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium sp. INR15
  ORGANISM  Mesorhizobium sp. INR15
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037085.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18676.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1825
                     /organism="Mesorhizobium sp. INR15"
                     /db_xref="taxon:2654248"
     Protein         1..1825
                     /product="MBG domain-containing protein"
                     /calculated_mol_wt=181371
     Region          3..225
                     /region_name="TPS"
                     /note="TPS secretion domain; pfam05860"
                     /db_xref="CDD:461762"
     Region          157..1772
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
ORIGIN      
        1 mvnwqsfsig agarvdidqp tststmlnrv tgstkstisg qlnangqvfl vnpngiaisk
       61 tgkvsaagfv gssldisddd fkagklkfkg kgasaavane gavsigrggy aaliggsvdn
      121 agsitvplgk vglgsgeqaa ldlsgdgflq vsvptkadgg salvsnsgii sadggtvelk
      181 aaavrdaarq avnmsgvvea rtvsgqsgai vlgggegtve isgtldasak sggkggkvtv
      241 tgrklklkha tvdasgkdgg gtikiggdkq gsgtlqhadt ttidadstis adatgtgngg
      301 tvivwsdeqt rfagkisarg gdiggnggft evsgkqrldf tgsvdlrarf gdtgdllldp
      361 ynvtisngtg ntggsmdant ndsvinvtml qnllatanvt istgsggaqa gditvaapis
      421 wnantltlna hhsivfnaga tiggvggltl vnnnggtggv isyalgasat ftgtpgaqal
      481 singqsytli ydvnglqsin sglngryala ntieasatyy wnnllgftal gtdgntniqn
      541 ggngfngtfd glghiinqiw vrqipanyvg lfgyvgasgv vrnvglvday isgsydtgai
      601 agwnkgtisg vwasgylqgv sgsgglvgfn egsitrsfst vavqsrdsnn vggiagynsg
      661 tisqvyasgs vlggdkvggl vgfnagalsd gystgavngt mggtfggsvg fswgtvtnvy
      721 fdittsgmtt gvgggtagvt stglttaqlq gsgatglsaa fsggstglyp ylksfypngv
      781 qaisgiaykd ngvtplssgt rqpyyvknpg fvtgvsngvd igtvttgvng yyyiavptgw
      841 itdsvlaytv rdphpndssg arngvtfrtg lsggnvanln vygdwrldev dssmtslsal
      901 qnasattvgs tyvgslsfan wqietaattf aldqavsiga gtlvlssngt vtqtdslaaa
      961 slvlggsggf nlsnagnqig tvaanagsvn lvdqgglvig svtsargalt tgstttgsvk
     1021 lqttgdltia agakvsgtnp vlaatgkfin srgsdavsat sgswlvyaan ptgntfgnld
     1081 sgntaiwnta aggavsatgn ryvfnyqptl tftstnaskv ygdamptlay svsgyqagva
     1141 naylgdsatt afsgapmlyt patlatqqlg agtytitfda gnvaglngya lafnstglls
     1201 vakravtvta daktraygda dpaltyqvtt gnlvdgdtly galatgattl sgvgsygiiq
     1261 gslananydi tyqgssltvg kravtvtada ksrvygdanp altyqvttgn lvngdslsgl
     1321 latsatnlsg vggygitqgt ltnvananyd ityqgssltv gkravtvtad aksriygdan
     1381 paltyqvttg nlvdgdtlsg alatdattls gvgsygitqg tlananydit ysgnsltvgk
     1441 ravtvtadak sriygdanpa ltyqlsagnl vnndsfsgal aatatasadv gtygitqgsl
     1501 ananyditye gssltvgkra vtvtasggqg kvygntdpss ygyastdlgs gaalagalsr
     1561 asgedvgsya igrgtltdaa nanydityvg agfsigkrav tvtansgqgk tygnadplty
     1621 gysftdlgtg salvgdlara sgegagsyai grgtltdaan anydityvga gfsigkrait
     1681 vvadaksrpq gtvnpaltyt vgglglvngd tfsgvlstda tpasapgsya ieqgslaisa
     1741 nyeltyvgad livsppntip tgeaastvay ntyahgggrp apvfftgapa dsdtqtlied
     1801 prldgpafcq tmgdaasvca gasvq
//
LOCUS       WP_258052345             275 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Mesorhizobium sp. INR15].
ACCESSION   WP_258052345
VERSION     WP_258052345.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium sp. INR15
  ORGANISM  Mesorhizobium sp. INR15
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 275)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 275)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Mesorhizobium sp. INR15"
                     /db_xref="taxon:2654248"
     Protein         1..275
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=29081
     Region          44..>235
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
ORIGIN      
        1 mnrlrnpsng qenqnceqai pigdgkvqaa mfdaqparar vftfglgsfk iaalldavdv
       61 rdnlvsalap gqspiamqel aasnfidrdr yehcfiptlv dtgsekvlfd tgfgdtgssl
      121 lgclqdlglg pndidvviit hghpdhiggl vkngepvfgr aryvfgaaef tfwteastvr
      181 earlenrdlf rrictglasq atfiapgcev lpgitaidaa ghspgllafl vesdghncss
      241 grtpsctmpc pssiqsgtpi lmmtkskpsr pacas
//
LOCUS       WP_258052419             227 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Mesorhizobium sp. INR15].
ACCESSION   WP_258052419
VERSION     WP_258052419.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium sp. INR15
  ORGANISM  Mesorhizobium sp. INR15
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 227)
  AUTHORS   Mullin,D.A., Zies,D.L., Mullin,A.H., Caballera,N. and Ely,B.
  TITLE     Genetic organization and transposition properties of IS511
  JOURNAL   Mol Gen Genet 254 (4), 456-463 (1997)
   PUBMED   9180700
REFERENCE   2  (residues 1 to 227)
  AUTHORS   Fischer,J., Maier,H., Viell,P. and Altenbuchner,J.
  TITLE     The use of an improved transposon mutagenesis system for DNA
            sequencing leads to the characterization of a new insertion
            sequence of Streptomyces lividans 66
  JOURNAL   Gene 180 (1-2), 81-89 (1996)
   PUBMED   8973350
REFERENCE   3  (residues 1 to 227)
  AUTHORS   Zekri,S. and Toro,N.
  TITLE     Identification and nucleotide sequence of Rhizobium meliloti
            insertion sequence ISRm6, a small transposable element that belongs
            to the IS3 family
  JOURNAL   Gene 175 (1-2), 43-48 (1996)
   PUBMED   8917074
  REMARK    Erratum:[Gene 1997 Mar 25;188(1):149]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01527.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Mesorhizobium sp. INR15"
                     /db_xref="taxon:2654248"
     Protein         1..227
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=24939
     Region          146..>226
                     /region_name="transpos_IS3"
                     /note="IS3 family transposase; NF033516"
                     /db_xref="CDD:468052"
ORIGIN      
        1 mtrqirpfiv evkqrrgtqk pshsiwgdld lskiatemtq payaaqlpns qvidfsirpl
       61 daeegdkpqa eyimadfqda qtvqttvapt kvevpeskkk vprtkkakae ltkparknga
      121 rpvpqaaeap vaaktarkty sekeraqkla qieksiagga tskiavgqag iseqtyyywk
      181 raaapssdsg dlrdlvalee enkrlkslla drlrkenael kkklgla
//
LOCUS       WP_258052358              53 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Mesorhizobium
            sp. INR15].
ACCESSION   WP_258052358
VERSION     WP_258052358.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium sp. INR15
  ORGANISM  Mesorhizobium sp. INR15
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..53
                     /organism="Mesorhizobium sp. INR15"
                     /db_xref="taxon:2654248"
     Protein         1..53
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=5399
     Region          1..46
                     /region_name="HTH_ARSR"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; cl46857"
                     /db_xref="CDD:481197"
     Site            order(9..11,19..20,22..23,25..29,40)
                     /site_type="DNA binding"
                     /note="DNA binding residues [nucleotide binding]"
                     /db_xref="CDD:99777"
ORIGIN      
        1 mrwvaagktd aeigiilgia aatahyhveq vkkkagtrsr seavallvla gtv
//
LOCUS       WP_258052469              55 aa            linear   BCT 02-MAR-2025
DEFINITION  TOBE domain-containing protein [Mesorhizobium sp. INR15].
ACCESSION   WP_258052469
VERSION     WP_258052469.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium sp. INR15
  ORGANISM  Mesorhizobium sp. INR15
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 55)
  AUTHORS   Koonin,E.V., Wolf,Y.I. and Aravind,L.
  TITLE     Protein fold recognition using sequence profiles and its
            application in structural genomics
  JOURNAL   Adv Protein Chem 54, 245-275 (2000)
   PUBMED   10829230
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019998.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08402.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..55
                     /organism="Mesorhizobium sp. INR15"
                     /db_xref="taxon:2654248"
     Protein         1..55
                     /product="TOBE domain-containing protein"
                     /GO_component="GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=5782
     Region          <1..46
                     /region_name="TOBE_2"
                     /note="TOBE domain; pfam08402"
                     /db_xref="CDD:462465"
ORIGIN      
        1 mggsaiyeid iggitkirvn tqingtavre gekieigfds adcvlldedg lrmar
//
LOCUS       WP_258052508             268 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Streptomyces sp. Ru73].
ACCESSION   WP_258052508
VERSION     WP_258052508.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru73
  ORGANISM  Streptomyces sp. Ru73
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 268)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Streptomyces sp. Ru73"
                     /db_xref="taxon:2080748"
     Protein         1..268
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=27049
     Region          9..262
                     /region_name="protocat_pcaD"
                     /note="3-oxoadipate enol-lactonase; TIGR02427"
                     /db_xref="CDD:131480"
ORIGIN      
        1 mtspatpllh hrldgpadap plvlgpslgt slavwepqla eltrthrvlr fdlpghggtp
       61 tdvlpspgag gttvaalarl vldlaghhgw stfhyagisl ggaigahlav hhadriasla
      121 micssarfge pagwreraat vrahgtaama qatpgrwfad pgtaagprgs glladlaaad
      181 ragyaaccda lagydvrsdl wsvaartlvv agrqdsatpp ahareiadgi pgaalvevag
      241 aahlagverp davnaalrvh ldaatagr
//
LOCUS       WP_258052518             389 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Streptomyces sp. Ru73].
ACCESSION   WP_258052518
VERSION     WP_258052518.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru73
  ORGANISM  Streptomyces sp. Ru73
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Streptomyces sp. Ru73"
                     /db_xref="taxon:2080748"
     Protein         1..389
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=40613
     Region          7..373
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mrreglrivr lanfvtpasg glrtalrelg egyraaghdp vlvvpgpaas dertpqgrvi
       61 tlpgpvlpgt ggyrvltgra rleqllrtla pdrlevsdrt tlrwtgewar rarvpavmvs
      121 hesvdgvlht wgvpryaars vadrlnsrta haysrivctt ewaaaefart garnvvtapl
      181 gvdlarahpg crseelrrrt gggasavlll csrlsvekrp graldalsrl radgvdaala
      241 vagdgplrar leararaerl pvaflghvag adtlaalqas advllapgpa etfglaalea
      301 macgtpvvan agsalaglig sagdtalddg hsiaaavrrv larpeeqrra aarrraedfg
      361 whaavnafla ahdaapltps rasalegaa
//
LOCUS       WP_258052529             368 aa            linear   BCT 02-MAR-2025
DEFINITION  tryptophan dimethylallyltransferase family protein [Streptomyces
            sp. Ru73].
ACCESSION   WP_258052529
VERSION     WP_258052529.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru73
  ORGANISM  Streptomyces sp. Ru73
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 368)
  AUTHORS   Ding,Y., Williams,R.M. and Sherman,D.H.
  TITLE     Molecular analysis of a 4-dimethylallyltryptophan synthase from
            Malbranchea aurantiaca
  JOURNAL   J Biol Chem 283 (23), 16068-16076 (2008)
   PUBMED   18390548
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023417.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11991.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Streptomyces sp. Ru73"
                     /db_xref="taxon:2080748"
     Protein         1..368
                     /product="tryptophan dimethylallyltransferase family
                     protein"
                     /GO_function="GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /GO_process="GO:0009820 - alkaloid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=40618
     Region          15..358
                     /region_name="ABBA-PTs"
                     /note="ABBA-type aromatic prenyltransferases (PTases);
                     cl19121"
                     /db_xref="CDD:473141"
     Site            order(72,85,87,153,155,157,215,217,219,267,282,284,336,
                     351,355)
                     /site_type="active"
                     /db_xref="CDD:260105"
ORIGIN      
        1 mssllsdsrg pagatfldyg sataarlldg agmdaergrd alrrmfspwg rreiterpew
       61 ysdvcadgsp iefsaafsad sveirvlvea vpdepdtraa qrsaaealhg ltrgcgaage
      121 rlaavwdlfl pdeqptgfav myagifaasg apefkvylnp tantrmtgaa rvreamdrlg
      181 fgkgweavra yarrgfdldr ivyfgldlld gpesrikvyf rhydiapael darmevsdeh
      241 eaghlsalcr qltgrpgnlr eqplvsnltf taagghipvs atvyvplwly aesdriirdr
      301 isavmaelgl pddryrells rvarrplsdg rgihtyasar vqrgrprmst ywsselydry
      361 pparyqgr
//
LOCUS       WP_258052541             114 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA cytosine methyltransferase [Streptomyces sp. Ru73].
ACCESSION   WP_258052541
VERSION     WP_258052541.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru73
  ORGANISM  Streptomyces sp. Ru73
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012372.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00145.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Streptomyces sp. Ru73"
                     /db_xref="taxon:2080748"
     Protein         1..114
                     /product="DNA cytosine methyltransferase"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=12007
     Region          16..>84
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(18..23,40..43,61..64,80,82)
                     /site_type="active"
                     /note="cofactor binding site [active]"
                     /db_xref="CDD:238192"
ORIGIN      
        1 mhgdptvpds rwpigslcsg yggldlgvqa alggslawha etdpgaaril arhwpgvpnl
       61 gdittirwad vprvcvltag fpcqrrlgrr ppdrpagrks fravaprgac hrgp
//
LOCUS       WP_258052561              65 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA carboxylase epsilon subunit [Streptomyces sp. Ru73].
ACCESSION   WP_258052561
VERSION     WP_258052561.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru73
  ORGANISM  Streptomyces sp. Ru73
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 65)
  AUTHORS   Diacovich,L., Peiru,S., Kurth,D., Rodriguez,E., Podesta,F.,
            Khosla,C. and Gramajo,H.
  TITLE     Kinetic and structural analysis of a new group of Acyl-CoA
            carboxylases found in Streptomyces coelicolor A3(2)
  JOURNAL   J Biol Chem 277 (34), 31228-31236 (2002)
   PUBMED   12048195
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025192.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13822.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Streptomyces sp. Ru73"
                     /db_xref="taxon:2080748"
     Protein         1..65
                     /product="acyl-CoA carboxylase epsilon subunit"
                     /GO_function="GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA]"
                     /GO_function="GO:0004658 - propionyl-CoA carboxylase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=6954
ORIGIN      
        1 mnlwrivsgs praeetaalt vvltaflaer aaaaaaaase epirsagwhr ahrnphrppg
       61 twrsr
//
LOCUS       WP_258052575             369 aa            linear   BCT 02-MAR-2025
DEFINITION  GAF domain-containing protein [Streptomyces sp. Ru73].
ACCESSION   WP_258052575
VERSION     WP_258052575.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru73
  ORGANISM  Streptomyces sp. Ru73
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 369)
  AUTHORS   Hughes,J.
  TITLE     Phytochrome three-dimensional structures and functions
  JOURNAL   Biochem Soc Trans 38 (2), 710-716 (2010)
   PUBMED   20298248
REFERENCE   2  (residues 1 to 369)
  AUTHORS   Heikaus,C.C., Pandit,J. and Klevit,R.E.
  TITLE     Cyclic nucleotide binding GAF domains from phosphodiesterases:
            structural and mechanistic insights
  JOURNAL   Structure 17 (12), 1551-1557 (2009)
   PUBMED   20004158
REFERENCE   3  (residues 1 to 369)
  AUTHORS   Aravind,L. and Ponting,C.P.
  TITLE     The GAF domain: an evolutionary link between diverse
            phototransducing proteins
  JOURNAL   Trends Biochem Sci 22 (12), 458-459 (1997)
   PUBMED   9433123
REFERENCE   4  (residues 1 to 369)
  AUTHORS   Santero,E., Hoover,T.R., North,A.K., Berger,D.K., Porter,S.C. and
            Kustu,S.
  TITLE     Role of integration host factor in stimulating transcription from
            the sigma 54-dependent nifH promoter
  JOURNAL   J Mol Biol 227 (3), 602-620 (1992)
   PUBMED   1404379
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013736.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01590.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Streptomyces sp. Ru73"
                     /db_xref="taxon:2080748"
     Protein         1..369
                     /product="GAF domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=39320
     Region          3..>348
                     /region_name="AcoR"
                     /note="Transcriptional regulator DhaR of acetoin/glycerol
                     metabolism [Transcription]; COG3284"
                     /db_xref="CDD:442514"
ORIGIN      
        1 msgtrppvpp rdivshswsr mlrlgltadr vnkrevfaae evarrrcasp lrdvvdriae
       61 mfqatsdaat mmlvvtdadg avlwragasa vrrradelgf tegadwteak vgtnaigtal
      121 aeaapvella gehfeqgqhp wycsaapihd prtgqllgvi dvsgpalslh pavgmlveaa
      181 trlaeaelwr shqqrldalr qlaepllags sepalvvddn gwvahragva vgdriaapra
      241 gqaiavpglg awlperladg wlvrpagrgr tvlldldlsg ppvlrastgd tswcrgitrr
      301 haeilsllha agpagltaaa lsrslfgdpd hlvtaraevs rlrrllgavv dtrpyrlaeg
      361 vrltirpgr
//
LOCUS       WP_258052585             110 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Streptomyces sp. Ru73].
ACCESSION   WP_258052585
VERSION     WP_258052585.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru73
  ORGANISM  Streptomyces sp. Ru73
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024375.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12973.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Streptomyces sp. Ru73"
                     /db_xref="taxon:2080748"
     Protein         1..110
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=11754
     Region          <25..105
                     /region_name="ChrR"
                     /note="Anti-sigma factor ChrR, cupin superfamily [Signal
                     transduction mechanisms]; COG3806"
                     /db_xref="CDD:443019"
ORIGIN      
        1 mttehnalaf ecsslddapv reifpgirlr plwsgengak ahvlemdpgt cwegidvhep
       61 gpeevfvvag ifndgqrdfp agsfihapag sshvpqtttg ctlfvfypeg
//
LOCUS       WP_258052706             434 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Streptomyces sp. Ru73].
ACCESSION   WP_258052706
VERSION     WP_258052706.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru73
  ORGANISM  Streptomyces sp. Ru73
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 434)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Streptomyces sp. Ru73"
                     /db_xref="taxon:2080748"
     Protein         1..434
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=45912
     Region          <16..>106
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          168..381
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Site            order(172,174,208,243..244,330,379)
                     /site_type="active"
                     /db_xref="CDD:277317"
     Site            order(172,174,208,243,330,379)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277317"
ORIGIN      
        1 maaqppapvp pgtpgappng qqqdgyaphd ayapqdghlp qggyapqegy avpqgghvph
       61 prqapvegyv pqqapqapqd aqaapqerld pdvrvrtrar pyarltygtg aqagappeqp
      121 padytpterd lpvvgpdgtp vtytdtlvdh pavdlqqvge gegggplyvv gdvhgyydel
      181 raalfaegli daeghwaagn trlwflgdft drgpdgigvi dlvmqlsaea aaaggyckal
      241 mgnhellllg akrfgdtpvq sgagtasfqa awllnggqkt dmdrlqdhhl qwmarldait
      301 hedghlllhs dttayldygd sieavndavh dvltrsdane vwdlfrkltk rfafrdesgp
      361 qavrellgty ggerivhghs pipyllgevg tedgegegia vegphvyadg lavamdggvt
      421 magkllvvql plta
//
LOCUS       WP_258052728             452 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA domain-containing protein [Streptomyces sp. Ru73].
ACCESSION   WP_258052728
VERSION     WP_258052728.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru73
  ORGANISM  Streptomyces sp. Ru73
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024486.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13086.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Streptomyces sp. Ru73"
                     /db_xref="taxon:2080748"
     Protein         1..452
                     /product="AAA domain-containing protein"
                     /GO_function="GO:0004386 - helicase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=47916
     Region          24..181
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(44..50,150)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          <107..422
                     /region_name="DNA2"
                     /note="Superfamily I DNA and/or RNA helicase [Replication,
                     recombination and repair]; COG1112"
                     /db_xref="CDD:440729"
ORIGIN      
        1 msrgipapdr tdfdpgaaaa aateailhdt lhgdrrgvvv dsppgagkst lvvraarela
       61 aagrplmiva qtnaqvddlv lrlaekdpel pvgrlhssep gaydpvldev dsvrtaakaa
      121 dlkglpivva taakwaytkv depwphaivd eayqmrsdal ltvaglfera lfvgdpgqld
      181 pfsvvgadqw aglsydpsas avstllahnp dlpqhrlpvs wrlpasaapl vshafypytp
      241 frsgtghgdr rltlgvpsdg savdrvvdea aetgwgllel parhtprtdp eavrgvalvv
      301 rrlldrggat vsergpdpap ltadriavgt ahrdqaaavr aaladlgvtg vtvdtanrlq
      361 greydvtvvl hplsgrpdat afhletgrlc vlasrhrhac ivvcregvaq lldehpstep
      421 vqlgvtvkfp dgweanhavl ahlaehrvpw rp
//
LOCUS       WP_258052829             313 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase domain-containing protein [Streptomyces sp.
            Ru73].
ACCESSION   WP_258052829
VERSION     WP_258052829.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru73
  ORGANISM  Streptomyces sp. Ru73
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 313)
  AUTHORS   Dang,G., Chen,L., Li,Z., Deng,X., Cui,Y., Cao,J., Yu,S., Pang,H.
            and Liu,S.
  TITLE     Expression, Purification and Characterisation of Secreted Esterase
            Rv2525c from Mycobacterium tuberculosis
  JOURNAL   Appl Biochem Biotechnol 176 (1), 1-12 (2015)
   PUBMED   25869294
REFERENCE   2  (residues 1 to 313)
  AUTHORS   Bellinzoni,M., Haouz,A., Miras,I., Magnet,S., Andre-Leroux,G.,
            Mukherjee,R., Shepard,W., Cole,S.T. and Alzari,P.M.
  TITLE     Structural studies suggest a peptidoglycan hydrolase function for
            the Mycobacterium tuberculosis Tat-secreted protein Rv2525c
  JOURNAL   J Struct Biol 188 (2), 156-164 (2014)
   PUBMED   25260828
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08924.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Streptomyces sp. Ru73"
                     /db_xref="taxon:2080748"
     Protein         1..313
                     /product="glycoside hydrolase domain-containing protein"
                     /calculated_mol_wt=33960
     Region          80..303
                     /region_name="GH25_muramidase"
                     /note="Endo-N-acetylmuramidases (muramidases) are
                     lysozymes (also referred to as peptidoglycan hydrolases)
                     that degrade bacterial cell walls by catalyzing the
                     hydrolysis of 1,4-beta-linkages between N-acetylmuramic
                     acid and N-acetyl-D-glucosamine residues; cl10448"
                     /db_xref="CDD:447900"
     Site            order(85,109,141,143,193,195,229,255,277,301)
                     /site_type="active"
                     /db_xref="CDD:119373"
ORIGIN      
        1 mlllvpavgl avalaallps wrtpaasggd rtaaapggsg aaagragdgp vaaddaavsr
       61 rgpapraanp vpgegpslyk gfgidtceap avsslrawns tryraigvyf aghgracpkq
      121 hnlspqwfqg akwagwkvlp vylgaqspcv knkhkrryai gsdpyqqgtn earvavqrar
      181 aygimprspi yldieaydlk nqrckdvtlr firswsrevr rfgyiagfys sansgvrhma
      241 aarakgitdl psviwfarwh vapstygekw lpdtawqpnr rihqyaghvl eehggrklri
      301 drnwvdapva vik
//
LOCUS       WP_258052944             624 aa            linear   BCT 02-MAR-2025
DEFINITION  CASTOR/POLLUX-related putative ion channel [Streptomyces sp. Ru73].
ACCESSION   WP_258052944
VERSION     WP_258052944.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru73
  ORGANISM  Streptomyces sp. Ru73
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 624)
  AUTHORS   Chen,C., Fan,C., Gao,M. and Zhu,H.
  TITLE     Antiquity and function of CASTOR and POLLUX, the twin ion
            channel-encoding genes key to the evolution of root symbioses in
            plants
  JOURNAL   Plant Physiol 149 (1), 306-317 (2009)
   PUBMED   18978069
REFERENCE   2  (residues 1 to 624)
  AUTHORS   Charpentier,M., Bredemeier,R., Wanner,G., Takeda,N., Schleiff,E.
            and Parniske,M.
  TITLE     Lotus japonicus CASTOR and POLLUX are ion channels essential for
            perinuclear calcium spiking in legume root endosymbiosis
  JOURNAL   Plant Cell 20 (12), 3467-3479 (2008)
   PUBMED   19106374
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06241.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Streptomyces sp. Ru73"
                     /db_xref="taxon:2080748"
     Protein         1..624
                     /product="CASTOR/POLLUX-related putative ion channel"
                     /calculated_mol_wt=68057
     Region          33..351
                     /region_name="TrkA"
                     /note="Trk/Ktr K+ transport system regulatory component
                     TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and
                     metabolism, Signal transduction mechanisms]; COG0569"
                     /db_xref="CDD:440335"
     Region          269..357
                     /region_name="Castor_Poll_mid"
                     /note="Castor and Pollux, part of voltage-gated ion
                     channel; pfam06241"
                     /db_xref="CDD:428842"
     Region          307..>541
                     /region_name="TrkA"
                     /note="Trk/Ktr K+ transport system regulatory component
                     TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and
                     metabolism, Signal transduction mechanisms]; COG0569"
                     /db_xref="CDD:440335"
ORIGIN      
        1 mrtrlrdrlr ywfdgtmdrg tpaligwlgl asvvlvalvs slvvaltded teknggwagv
       61 awmsllrtld pgtmggdtgr pvflalmlav tiggifivsa ligvlttgle drirelrkgk
      121 grlierghti vlgwseqvft viaelveanq serrscvvil adrdkvdmed eirrriprtg
      181 rtrvicrsgs plrredlelv spdtaksimv lppvgddgdi dvikmlllls srkwrgrlps
      241 vvaavqssen laaarlaagd talvidaddi avrlivqshr qaglsavfne llsfvgneiy
      301 pwtepalvga efgdtldrfd lgipvglrrr tgemlvnppm dtvigagdql lvvaeddlli
      361 rladtrpeiv gaaiasaage rpvpdrtlvi gwnsrapkiv klldrlvepg svvdiastrr
      421 paedlftgrl enltvghkhc vptrrsslea vgldgyrhvv vltddgidpe raddrtlvtl
      481 lhlrdielrl gdpysivtem nddanrevaq vtkaddfivs tkvisllltq ltenrqlyav
      541 fadlfdpegs eiylkpagdy lvpgvqanfa tvieaarrrg etaigyrlar hsdeppsygv
      601 rlnpaktapl tlgeddaivv laee
//
LOCUS       WP_258052994             532 aa            linear   BCT 02-MAR-2025
DEFINITION  SpoIIE family protein phosphatase [Streptomyces sp. Ru73].
ACCESSION   WP_258052994
VERSION     WP_258052994.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru73
  ORGANISM  Streptomyces sp. Ru73
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 532)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Streptomyces sp. Ru73"
                     /db_xref="taxon:2080748"
     Protein         1..532
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=56760
     Region          19..>137
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          <164..381
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
     Region          428..505
                     /region_name="HATPase_RsbW-like"
                     /note="Histidine kinase-like ATPase domain of RsbW, an
                     anti sigma-B factor and serine-protein kinase involved in
                     regulating sigma-B during stress in Bacilli, and related
                     domains; cd16936"
                     /db_xref="CDD:340413"
     Site            order(429,433,436,457,459,461,463..464,477..480,492,494,
                     498..499,501)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340413"
     Site            order(470,480)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340413"
ORIGIN      
        1 maagmvrqgr spvrgvggqq dvfrelvess qdailikrvd geitfwnaaa erlfgyspae
       61 avgrhvgmlv ppglkeeedc lleriargew iehyetqrvt cagkvldidv slwpirnrdg
      121 svtsacslmr ditdckraea elaalhaqqr hislalhlmg askqipgara asrylpstqg
      181 qgvggdwldl idlgagrvgi fvgdvmgrgl daavvmgqlr saaralalag lppwelmral
      241 dafthdlpeq fvtcvylead pvlgeamvcs aghlpvllie pdasvhqlpv ptglplgvgg
      301 lpheqvripl ragatlalyt dglvetahsd mdhrldllag tlgevfttvg dleeaadrvl
      361 htllpdsavy addvtlllvd fpaaplqtaq telpsqafsv pagrrflrgh lyawglaala
      421 dtalllasel ltngvqhgqg plglrvwrss relgveisdr smprprarla agteesgrgl
      481 ilvssladaw gtrptttgkt vwftllteaa phepacrtrg adkeagetpa pv
//
LOCUS       WP_258053199             882 aa            linear   BCT 02-MAR-2025
DEFINITION  SpoIIE family protein phosphatase [Streptomyces sp. Ru73].
ACCESSION   WP_258053199
VERSION     WP_258053199.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru73
  ORGANISM  Streptomyces sp. Ru73
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 882)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Streptomyces sp. Ru73"
                     /db_xref="taxon:2080748"
     Protein         1..882
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=93730
     Region          19..134
                     /region_name="RsbW"
                     /note="Anti-sigma regulatory factor (Ser/Thr protein
                     kinase) [Signal transduction mechanisms]; COG2172"
                     /db_xref="CDD:441775"
     Region          162..260
                     /region_name="PAS"
                     /note="PAS fold; pfam00989"
                     /db_xref="CDD:395786"
     Region          298..452
                     /region_name="PtsP"
                     /note="Signal transduction protein containing GAF and PtsI
                     domains [Signal transduction mechanisms]; COG3605"
                     /db_xref="CDD:442824"
     Region          430..872
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
ORIGIN      
        1 mrrpvitara aatfepvgrs vatarafvrd tlqgwghgdi iddavvltse lvtnavvhag
       61 taadvlclrt dtgvrievad ryperevpvq ssgqalahpd reggrglllc galatrwgve
      121 ytssqkhvwf qldlperpag trtagpalpv dalpvaehrv rvavvqidrg gcisswneda
      181 qdlfayapeq vigkpltdfa awphtpgtgt giaealqlsr wegsygirga dgrvvpvyas
      241 hlrvrdadge pstvcllvrd heravlqspp rtpsdssgqq segrgpadpf evfigspapd
      301 dldgllqrtv erardmldgd aaylllatdd etelevrast glpsarqrfa rvpveagsgr
      361 ygsarmpavh edltavqgav pllsgtgmrs vvtvplkveg rltgslgvaa eapgrytnee
      421 alrlqfaadr ialaverarl telerlrrgs lsflveasdl lagtldrnqt lalmaqmtvp
      481 tlatwcavyt vadqasepel sfvlhededr idglktllqk vpppepvptp garvwtapgd
      541 aahdaalrts lrslglgasa rpssgpgatl atasavgget vvlplvarnr vigmltlgkp
      601 teehfrqeil elaedlsrra alaldnarly sertaisqsl qrsllppelp dvpgvevevi
      661 yraagegnev ggdfydlfpi rdgaygfaig dvcgtgpeaa avtglarhal rllaregfgg
      721 pavlerlnaa ildegarsrf ltllygelwp qrdgsavlkv vcaghplplr lrqdgtvepa
      781 aepqpllgvm edlelyaqtv tldpgdvllc vtdgvterre gtrmlgddgl advlttctgl
      841 tagavaaril raverfaaep asddmailam rvpeavhegl ap
//
LOCUS       WP_258053206             744 aa            linear   BCT 02-MAR-2025
DEFINITION  protein kinase domain-containing protein, partial [Streptomyces sp.
            Ru73].
ACCESSION   WP_258053206
VERSION     WP_258053206.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru73
  ORGANISM  Streptomyces sp. Ru73
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 744)
  AUTHORS   Hunter,T. and Plowman,G.D.
  TITLE     The protein kinases of budding yeast: six score and more
  JOURNAL   Trends Biochem Sci 22 (1), 18-22 (1997)
   PUBMED   9020587
REFERENCE   2  (residues 1 to 744)
  AUTHORS   Hanks,S.K. and Hunter,T.
  TITLE     Protein kinases 6. The eukaryotic protein kinase superfamily:
            kinase (catalytic) domain structure and classification
  JOURNAL   FASEB J 9 (8), 576-596 (1995)
   PUBMED   7768349
REFERENCE   3  (residues 1 to 744)
  AUTHORS   Hanks,S.K. and Quinn,A.M.
  TITLE     Protein kinase catalytic domain sequence database: identification
            of conserved features of primary structure and classification of
            family members
  JOURNAL   Methods Enzymol 200, 38-62 (1991)
   PUBMED   1956325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00069.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Streptomyces sp. Ru73"
                     /db_xref="taxon:2080748"
     Protein         1..>744
                     /product="protein kinase domain-containing protein"
                     /GO_function="GO:0004672 - protein kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006468 - protein phosphorylation
                     [Evidence IEA]"
     Region          <126..>209
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          <315..737
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          320..>525
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
ORIGIN      
        1 mdeyagrvla eryrlplppp dapepalvra ldthsgqqvl vrqvplpevv daelvdeydt
       61 ddapgggygd agrsrhtgag tgggygdagr arrtgagggs radrdpsdpv vrraleaata
      121 aarlpdhprl dqvfdvfaqd gslwivseli parplsalla drtlsphraa eiaadilaal
      181 rtlhahgwth rnitprtvlv cddgrvvltg laagaaeeal cgydpvpras asheggrgel
      241 apresapppg avhpgvvrew raggapsgaa dsgasgaagg gpsgaapgqs ssagrgagap
      301 ggpgarvsaa egarrggvtr avpgagveph ggaagargpq avpgeraavp gersaapger
      361 papgerpavp geqrgrgpvd rpsapgagaa vrgagqqpgs gtgggpgvpa reasgagaae
      421 dearraraga iaayragara aaartahdah aaprtdrgga apeggrphdq eqqhgqqftp
      481 yrdhigpdag pgqghpgndr raddrpggdr ptaerpggdr lgngrppang gpaqgnrsaa
      541 lppgppgvpp yrpgppqgrp aappsgsagl ppgppgvlpq rppqgtpwhg qgapsaqrqg
      601 pgtppaprhp aqpgsatygg glpgpvrrpq ggtpalptag hagqagavpg pagpppartg
      661 tgagmgagtg raagavpapr ngapsgaqsg pgtgvpsgvr pgpgtgvqpg pgtrarsdad
      721 tggvppgagt gnalaaerar qari
//
LOCUS       WP_258053215              91 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Streptomyces sp. Ru73].
ACCESSION   WP_258053215
VERSION     WP_258053215.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru73
  ORGANISM  Streptomyces sp. Ru73
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 91)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Streptomyces sp. Ru73"
                     /db_xref="taxon:2080748"
     Protein         <1..91
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <1..82
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 vhpcaargie priahmaeeh gtqlaliarg lgvavaprlg rgpvpegvsv vpvrhpmrrh
       61 vyaiwradad rrpsiraavg alrevgrsle v
//
LOCUS       WP_258053250             270 aa            linear   BCT 02-MAR-2025
DEFINITION  polysaccharide deacetylase family protein [Streptomyces sp. Ru72].
ACCESSION   WP_258053250
VERSION     WP_258053250.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru72
  ORGANISM  Streptomyces sp. Ru72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 270)
  AUTHORS   Freiberg,C., Fellay,R., Bairoch,A., Broughton,W.J., Rosenthal,A.
            and Perret,X.
  TITLE     Molecular basis of symbiosis between Rhizobium and legumes
  JOURNAL   Nature 387 (6631), 394-401 (1997)
   PUBMED   9163424
REFERENCE   2  (residues 1 to 270)
  AUTHORS   Mishra,C., Semino,C.E., McCreath,K.J., de la Vega,H., Jones,B.J.,
            Specht,C.A. and Robbins,P.W.
  TITLE     Cloning and expression of two chitin deacetylase genes of
            Saccharomyces cerevisiae
  JOURNAL   Yeast 13 (4), 327-336 (1997)
   PUBMED   9133736
REFERENCE   3  (residues 1 to 270)
  AUTHORS   Millward-Sadler,S.J., Poole,D.M., Henrissat,B., Hazlewood,G.P.,
            Clarke,J.H. and Gilbert,H.J.
  TITLE     Evidence for a general role for high-affinity non-catalytic
            cellulose binding domains in microbial plant cell wall hydrolases
  JOURNAL   Mol Microbiol 11 (2), 375-382 (1994)
   PUBMED   8170399
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013672.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01522.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Streptomyces sp. Ru72"
                     /db_xref="taxon:2080747"
     Protein         1..270
                     /product="polysaccharide deacetylase family protein"
                     /GO_function="GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=30005
     Region          82..268
                     /region_name="CDA1"
                     /note="Peptidoglycan/xylan/chitin deacetylase,
                     PgdA/NodB/CDA1 family [Carbohydrate transport and
                     metabolism, Cell wall/membrane/envelope biogenesis];
                     COG0726"
                     /db_xref="CDD:440490"
ORIGIN      
        1 mrarrlrall agilaaavls gtagcaqsvd pierlgkkaa qrvrrsygph egayrhwglt
       61 aplapapwpa rplprhtdad eetlpevldr vpthdkvvfl tydegaerdp rfvemvrelr
      121 lpvsvfltdt avgpayarva rlraagatiq nrtmdhaglr grpyaeqraq icagrdrlrs
      181 rlgrrpvllr ppygrydrtt lraaadcgik alilwrptra ygratalhpg dilrphepgr
      241 pltsltaett rvlrrlqsrg ftvarledyl
//
LOCUS       WP_258053261             170 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5994 family protein [Streptomyces sp. Ru72].
ACCESSION   WP_258053261
VERSION     WP_258053261.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru72
  ORGANISM  Streptomyces sp. Ru72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 170)
  AUTHORS   Ogasawara,Y. and Liu,H.W.
  TITLE     Biosynthetic studies of aziridine formation in azicemicins
  JOURNAL   J Am Chem Soc 131 (50), 18066-18068 (2009)
   PUBMED   19928906
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039955.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19457.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Streptomyces sp. Ru72"
                     /db_xref="taxon:2080747"
     Protein         1..170
                     /product="DUF5994 family protein"
                     /calculated_mol_wt=17500
     Region          25..126
                     /region_name="DUF5994"
                     /note="Family of unknown function (DUF5994); pfam19457"
                     /db_xref="CDD:466094"
ORIGIN      
        1 mdaitkpaeg aqpgdahtyr mplprlsltp gvshgpldga wwprcdalel elpalvasld
       61 pavgtvtrvt vdpaswpdap qkvmapghvi evvrsdpaae ahaltldcst tgrwellvap
      121 pdepagaatr lltaaadpen tlsaprilal aesgldaeat waseggpglr
//
LOCUS       WP_258053269             426 aa            linear   BCT 02-MAR-2025
DEFINITION  zf-HC2 domain-containing protein [Streptomyces sp. Ru72].
ACCESSION   WP_258053269
VERSION     WP_258053269.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru72
  ORGANISM  Streptomyces sp. Ru72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024881.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13490.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Streptomyces sp. Ru72"
                     /db_xref="taxon:2080747"
     Protein         1..426
                     /product="zf-HC2 domain-containing protein"
                     /calculated_mol_wt=45056
     Region          66..>184
                     /region_name="RsiW"
                     /note="Transmembrane transcriptional regulator RsiW
                     (anti-sigma-W factor) [Transcription]; COG5662"
                     /db_xref="CDD:444381"
     Region          144..292
                     /region_name="MDMPI_N"
                     /note="Mycothiol maleylpyruvate isomerase N-terminal
                     domain; pfam11716"
                     /db_xref="CDD:432021"
ORIGIN      
        1 msgaersrgh eefagygaye gndgqgapgg agerevsdva rgplagggas sgagavpleh
       61 rvlksllgaw alaacsaeet aaveahldgc gpcaeearrl rkavgllqrp esldldpalr
      121 trvlascldr rppripvpew aapydaeaar ldallqdigd aewhtpvrlr wfdgrapasr
      181 rttvagviah llsvdglvam algledplad tagedrspeg rteaywraah fpptrsvrvp
      241 wrdqthhlvr avsltddtsg tvpvsygafg lslhdamldr afecwvhaed ianavdypyd
      301 ppaprhlhqm fdlavrilpl tlaarrragl aapprggrhl vpagepgrsl rleieglggg
      361 ewlipldspg avasadheva hvaldgvefc rlaaghvppq daaagqvgdr eairdvlfaa
      421 aslsrm
//
LOCUS       WP_258053275             942 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 2 TIM barrel-domain containing protein
            [Streptomyces sp. Ru72].
ACCESSION   WP_258053275
VERSION     WP_258053275.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru72
  ORGANISM  Streptomyces sp. Ru72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 942)
  AUTHORS   Jacobson,R.H., Zhang,X.J., DuBose,R.F. and Matthews,B.W.
  TITLE     Three-dimensional structure of beta-galactosidase from E. coli
  JOURNAL   Nature 369 (6483), 761-766 (1994)
   PUBMED   8008071
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02836.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Streptomyces sp. Ru72"
                     /db_xref="taxon:2080747"
     Protein         1..942
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=103816
     Region          60..584
                     /region_name="LacZ"
                     /note="Beta-galactosidase/beta-glucuronidase [Carbohydrate
                     transport and metabolism]; COG3250"
                     /db_xref="CDD:442481"
     Region          585..>656
                     /region_name="LacZ_4"
                     /note="Beta-galactosidase, domain 4; pfam16353"
                     /db_xref="CDD:465101"
     Region          701..>872
                     /region_name="Bgal_small_N"
                     /note="Beta galactosidase small chain; cl46900"
                     /db_xref="CDD:481240"
ORIGIN      
        1 mqmsrrgvli lgaagaagaa vagglpagsa raaetadaad astrterlyl sgedadhpvd
       61 wdflctsgrr sgswgsipvp snwefqgygt ynygwnlvpe ekghyrhtft ppahwrdrrv
      121 flvfegamtd teawingesa gpvhrggfyr frhevtgklr pgqdnllevt vskestddsv
      181 nraerlgdyw nfggiyrpvh leafplqhie riavdaradg tlridahlsg tgtadrlvaq
      241 vtdlsgrpvg apftaavapg dttvtlrtav dsprlwtaet phlyrveval rgddrtvhrv
      301 derfgfrtve vrpgdgvyvn gvkillkgan rhtiwptsgr atsarisrkd illmqemnmn
      361 avrmshyppd thfldladel glyvldelag wqksydetag rplvaemvtr dvnhpsilfw
      421 dngneggwnt aldgdyarhd pqqrtvlhpw anfggintdh yetydstrri lqergdvfmp
      481 teflhglydg gagaglddyw klmgrerlsa ggflwallde givrddlgga idvagnaapd
      541 gilgpfreke asfytikdiw spvqlaeper fssglpddfd grigltnhya ftntrtcrft
      601 wrllafrtps qrrdghtvra qgtasapdie pgaqgvlrlp lpsgwrhada laltvtdadg
      661 reihswtwti tsaadqalrl vrtgpgpavr gsledntltl tsrhttvtld attgllagvt
      721 hrgrdfalsr gplpttgtad ltrlmhgpdg ngytveaeys gvlrhvrwrl hpsgwlqldy
      781 ryhltgeydf fgvgfdhpea qvtgvtwlgh gphrvwknrl rgvatdvwtk qyndtatgad
      841 gwvypefkgy hagvrwaslh ttagrltvvg edenlylrlf tprfgpdprh tappfpqgdl
      901 sfldaipaig tkfdppaalg psgrpttatg dygrtlyfsf se
//
LOCUS       WP_258053313             197 aa            linear   BCT 02-MAR-2025
DEFINITION  pilus assembly protein TadG-related protein [Streptomyces sp.
            Ru72].
ACCESSION   WP_258053313
VERSION     WP_258053313.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru72
  ORGANISM  Streptomyces sp. Ru72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 197)
  AUTHORS   Tomich,M., Planet,P.J. and Figurski,D.H.
  TITLE     The tad locus: postcards from the widespread colonization island
  JOURNAL   Nat Rev Microbiol 5 (5), 363-375 (2007)
   PUBMED   17435791
REFERENCE   2  (residues 1 to 197)
  AUTHORS   Kachlany,S.C., Planet,P.J., Bhattacharjee,M.K., Kollia,E.,
            DeSalle,R., Fine,D.H. and Figurski,D.H.
  TITLE     Nonspecific adherence by Actinobacillus actinomycetemcomitans
            requires genes widespread in bacteria and archaea
  JOURNAL   J Bacteriol 182 (21), 6169-6176 (2000)
   PUBMED   11029439
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13400.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Streptomyces sp. Ru72"
                     /db_xref="taxon:2080747"
     Protein         1..197
                     /product="pilus assembly protein TadG-related protein"
                     /calculated_mol_wt=20770
ORIGIN      
        1 maddrgqtlp lyiwltgill faafaffafa qaasarngaq saadaaalaa aqdardqlmd
       61 riqtavgqed dwltwlggrl paddgataaa qrlaaendsa legeaepvtr ggypgfqvav
      121 qtnytvgdsv ipgtegmhar ahaiaviepr cdfdaqadpk klvrlncdgq tvdidpekfk
      181 pvdlpdasvl fsvhlae
//
LOCUS       WP_258053350             807 aa            linear   BCT 02-MAR-2025
DEFINITION  SpoIIE family protein phosphatase [Streptomyces sp. Ru72].
ACCESSION   WP_258053350
VERSION     WP_258053350.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru72
  ORGANISM  Streptomyces sp. Ru72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 807)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Streptomyces sp. Ru72"
                     /db_xref="taxon:2080747"
     Protein         1..807
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=85807
     Region          <36..101
                     /region_name="AmiR"
                     /note="Two-component response regulator, AmiR/NasT family,
                     consists of REC and RNA-binding antiterminator (ANTAR)
                     domains [Signal transduction mechanisms, Transcription];
                     COG3707"
                     /db_xref="CDD:442921"
     Region          147..287
                     /region_name="GAF_2"
                     /note="GAF domain; pfam13185"
                     /db_xref="CDD:433019"
     Region          374..806
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
ORIGIN      
        1 mvgpdpvggp pagaeaaged grgqtspvgr laatvdrlrr evraaqaead gralvelakg
       61 ilverlgcgp aqaarqlael arqagltple favevinqas rdrlsevata flaittdaad
      121 sdevggppan rssvvrlraa esralaahdt qavadslleh altplgavav aiwavgsdgs
      181 lslagsagfs saeagrwryv ppgvatvarr glaeraghwi gslsetglps igqhlypdgg
      241 rvavpagtgg rihgvleivw paplgpqppq ivrqvealae lcahtletya lqypdgvprp
      301 gvlphvaelm dladglhdpa lvlvphldad gdlvdfriqh vnsrfldpag rprgvvngal
      361 lleayplaag qselfdrier vyatgepfra hrmrltalvd dvplaavadi nitrhagnvl
      421 liwrvedeta rlasllqhaq rlgriggfee nlltgeitwn gqlyslygrp tssapvsled
      481 lpahahpdda vaigrflrtl lhhrrpasta frlqrpdgvt rhirvvaepv ldsdgrlfvv
      541 rgayqdisah hwtevalaat rdqlahteqq asernrltlq lqhaimppaq apleapglqv
      601 avryrpaete qlvggdwyda vvlpselvll cvgdvaghgi eaatsmvvlr nalrglavtg
      661 agpgqllswl nmvahhltga vtatavcaly dparhtlrwa raghlppvlv rgaeaaplpl
      721 vkglllgavp eatyeehevq lavddtllmy tdglierrdr sveeslaqll taartvsptl
      781 dqqldrllty sksdtdddtc ivgirva
//
LOCUS       WP_258053367             158 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5709 domain-containing protein [Streptomyces sp. Ru72].
ACCESSION   WP_258053367
VERSION     WP_258053367.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru72
  ORGANISM  Streptomyces sp. Ru72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039203.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18970.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Streptomyces sp. Ru72"
                     /db_xref="taxon:2080747"
     Protein         1..158
                     /product="DUF5709 domain-containing protein"
                     /calculated_mol_wt=16611
     Region          102..150
                     /region_name="DUF5709"
                     /note="Family of unknown function (DUF5709); pfam18970"
                     /db_xref="CDD:465935"
ORIGIN      
        1 mtensmgdev yqpqqdedvv edmsplespd slenrvvepm eegysppekp lavndvgtta
       61 aeqrdgesld erlarevped tatvgdgigd lpggegeprd devggpdagr lvapdegahe
      121 dtdaeavand vgidsgarta eeaavhvvpd ddedetrl
//
LOCUS       WP_258053372             589 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Streptomyces sp. Ru72].
ACCESSION   WP_258053372
VERSION     WP_258053372.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru72
  ORGANISM  Streptomyces sp. Ru72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 589)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Streptomyces sp. Ru72"
                     /db_xref="taxon:2080747"
     Protein         1..589
                     /product="AMP-binding protein"
                     /calculated_mol_wt=63903
     Region          103..576
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(244,247..252,254..255)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(247,361..362,383..388,463,475,478,489,569)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(247,288..289,336,338..339,342,361..362,383..388,463,
                     475,478,486..489,550)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(288,338..339,342,361,486..488,544,550)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
ORIGIN      
        1 mreptttrgr dvmdprdats atdtesaget asatftagat diasrapava pppaptghrd
       61 tfardhlppp eqwpelrfdl pelryperln aavelldrta pdrpafrttd gdvwtygqlr
      121 arvdrvahal tsrlgvvpgn rvllrgpttp wlaacwlavl kagaiavtvl aqqrphelrt
      181 mcaiarvgha lcdvrvvddl vkadvpglri tpyggdapdd llrlpvpgep yapvdtaadd
      241 valiaftsgt tgrpkgcmhf hrdvlaiadt fsrhilrpcq ddvfagsppl gftfglgglv
      301 vfplragass llleqagprq llpaiaehrv svlftaptay ramldelday dttslrrcvs
      361 agenlpeatw rawhertglr ivngigatel lhifisaadd rirpgttglp vpgwharvqd
      421 adgvpvpdge pgllavrgpv gcryladprq reyvrggwni tgdtyvrepd gyfryvarad
      481 dmiisagyni agpevedall rhpdvvetav vgrpdeargq ivvayavlre garrdpealr
      541 afltselapy kcprefvfld alprtatgkl qrfrlradad pvpvrgdhe
//
LOCUS       WP_258053376             176 aa            linear   BCT 02-MAR-2025
DEFINITION  TerD family protein [Streptomyces sp. Ru72].
ACCESSION   WP_258053376
VERSION     WP_258053376.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru72
  ORGANISM  Streptomyces sp. Ru72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 176)
  AUTHORS   Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Ter-dependent stress response systems: novel pathways related to
            metal sensing, production of a nucleoside-like metabolite, and
            DNA-processing
  JOURNAL   Mol Biosyst 8 (12), 3142-3165 (2012)
   PUBMED   23044854
REFERENCE   2  (residues 1 to 176)
  AUTHORS   Taylor,D.E.
  TITLE     Bacterial tellurite resistance
  JOURNAL   Trends Microbiol 7 (3), 111-115 (1999)
   PUBMED   10203839
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014404.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02342.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Streptomyces sp. Ru72"
                     /db_xref="taxon:2080747"
     Protein         1..176
                     /product="TerD family protein"
                     /calculated_mol_wt=18965
     Region          2..>121
                     /region_name="TerD_like"
                     /note="Uncharacterized proteins involved in stress
                     response, similar to tellurium resistance terD; cl18957"
                     /db_xref="CDD:473128"
     Site            order(28,30,76)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:132992"
ORIGIN      
        1 msgggqglgk vevrlrwdps pygepprhld iiaatypadd lygrpayvvh ydsrspdgti
       61 nmsrhsqtgm gfgfvevmvl efdrlspafg rvvvgvaihq nggprtfgdi snagvvvveg
      121 yrqliaddfa rvadataatv aeftrdsagt welremirgf dsdpvlftae mgspeq
//
LOCUS       WP_258053444             529 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase [Streptomyces sp. Ru72].
ACCESSION   WP_258053444
VERSION     WP_258053444.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru72
  ORGANISM  Streptomyces sp. Ru72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Streptomyces sp. Ru72"
                     /db_xref="taxon:2080747"
     Protein         1..529
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=54410
     Region          228..457
                     /region_name="Peptidases_S8_S53"
                     /note="Peptidase domain in the S8 and S53 families;
                     cl10459"
                     /db_xref="CDD:415849"
     Site            order(270,329,440)
                     /site_type="active"
                     /db_xref="CDD:173787"
     Site            order(270,440)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:173787"
ORIGIN      
        1 mvtplpqsll pqgvaelgmd alcdrlermp evtvtrrlrs peklksagmq pscpeivvve
       61 aaeaqvpamr slhvhiepdl plsgtgpaaa ptagvlplrd pglvmpleep aeislrvcgp
      121 dgeplagagv fligatwpsq gvtaadgtvt ltlatetaet vqslyvrpvg gytdrwihrp
      181 dlsatqenlv tltplaqvyp eleqrqqygw gqqamrldrl pptfrafgvr vavigsgvst
      241 ehpdlrqrvr sgvdlvrgtd ngwahdtlgt gthaagiiag adtgkgiigi avdaeievcq
      301 vlpdghfsdl iaaldhcier evdvahlava apypsalvsr kladayaagi acvapagdtg
      361 gpvgfpgslp tvftvgalgv fgsypqdtsq athigpqltp eglfaapfsc ygpgvdaaap
      421 gvavlscapr ggytaldgtg tasahvagla alvlahhedf hgqllprgpg rvqhlfeiia
      481 gscrqlaapg tleatrvgrg lpdalvalgl apgvqlapal spyassmag
//
LOCUS       WP_258053485             541 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Streptomyces sp. Ru72].
ACCESSION   WP_258053485
VERSION     WP_258053485.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru72
  ORGANISM  Streptomyces sp. Ru72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10170721
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Streptomyces sp. Ru72"
                     /db_xref="taxon:2080747"
     Protein         1..541
                     /product="ABC transporter substrate-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=58577
     Region          27..523
                     /region_name="PBP2_clavulanate_OppA2"
                     /note="The substrate-binding domain of an oligopeptide
                     binding protein (OppA2) from the biosynthesis pathway of
                     the beta-lactamase inhibitor clavulanic acid contains the
                     type 2 periplasmic binding fold; cd08506"
                     /db_xref="CDD:173871"
     Site            order(45,47,50,382,416,432..433)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:173871"
ORIGIN      
        1 maialgatac ggsssntssg apvkggtltv ldesdfdhtd pqrtyttege stdelfvrtl
       61 tawdeagstp klvgdlatdt gtpskgdtvw tfhlrhgvkw qdgtdvtaqd vkygverafs
      121 gdinggppya aqwlvgggdy kgpysgkqld siqtpdqyti vfhldqpvad fnettamsgw
      181 savpkahdtg stydthvwsd gpymiksytk nkelvlvknk ywqqstdpir qqnvdefdfk
      241 fgqdqaaidq qiksdggvaq tsieqyplag sdlnsfandp tiksryynna apginylain
      301 trtvkdirvr eaieyaidkt tvrgafggea ygdyastmls pgiggykkfn lystnpagdi
      361 akakalmkqa gdpkltmsma ientptqdhf gdavktslaq igitvnlvpi qlanyfntvs
      421 nvknqydltw gdwiadwpna stvlptlfdg dliaknpqan qdlsylndpn vnaqitkisk
      481 vadisqrnaa ygdldeqimk daavvplmym kfsaisgskv ggvipdtima epslvhvyvk
      541 q
//
LOCUS       WP_258053535             712 aa            linear   BCT 02-MAR-2025
DEFINITION  glycogen debranching N-terminal domain-containing protein
            [Streptomyces sp. Ru72].
ACCESSION   WP_258053535
VERSION     WP_258053535.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru72
  ORGANISM  Streptomyces sp. Ru72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026092.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14742.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Streptomyces sp. Ru72"
                     /db_xref="taxon:2080747"
     Protein         1..712
                     /product="glycogen debranching N-terminal
                     domain-containing protein"
                     /calculated_mol_wt=73728
     Region          83..254
                     /region_name="GDE_N_bis"
                     /note="N-terminal domain of (some) glycogen debranching
                     enzymes; pfam14742"
                     /db_xref="CDD:434175"
     Region          313..623
                     /region_name="GDB1"
                     /note="Glycogen debranching enzyme (alpha-1,6-glucosidase)
                     [Carbohydrate transport and metabolism]; COG3408"
                     /db_xref="CDD:442634"
ORIGIN      
        1 mpvpapfsap dgnrrsrhgp seprpsrgap pavswmprgt papvphadrp qactpplpav
       61 prrvadlppa htalicvalp glvistaqgq ltgqglegfy ragrrvlsrc qvrvagrepl
      121 pvqarmvaad rarfvgtvhv spdagpdpdv vvervrfadg teritlhsaa prplrlpvev
      181 algtdlaelg eiasgstgpe lpatvhdsgl rwscqkgdca vtaappptda lasagllrwe
      241 lelppggtrs velrlrpdga apvravgqga asplaqprat gddprvqpll dtcvddlral
      301 llrdpahpcd iqlaagapwr cgpapaesla aarmtlplgt rlaagtlril artqiggpgl
      361 rsgmipgprr dagahlppgc tgteatllfp vllaeawrwg lpereteell paaehclrwl
      421 rttvgdgvyl pdpqpagplr cetqayahra avvgadllda yarpggaelr ewaeelrdaf
      481 cedfwiedrs ggrpaaartr dgrlvphlga gtahlldtgl lgcgtlapgl ldkvrteqla
      541 rllggpamds gwglrglaag eaaynpfghr ggavrvqeta vavaglaaag yekeaggllg
      601 gmlaaaeafg yrlpemyage praegsaplp hpaacrpaat aaaagvlllt alvgirpdap
      661 agtvtlcpvr saplgeivlt glrlagapfs vrvgrlglam veeaadglql gv
//
LOCUS       WP_258053626             115 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6479 family protein [Streptomyces sp. Ru72].
ACCESSION   WP_258053626
VERSION     WP_258053626.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru72
  ORGANISM  Streptomyces sp. Ru72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039795.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20087.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Streptomyces sp. Ru72"
                     /db_xref="taxon:2080747"
     Protein         1..115
                     /product="DUF6479 family protein"
                     /calculated_mol_wt=12020
     Region          2..99
                     /region_name="DUF6479"
                     /note="Family of unknown function (DUF6479); pfam20087"
                     /db_xref="CDD:466286"
ORIGIN      
        1 maasdaawgv lgafvgglli agalvwavrl gikvrrreps pprpsdqptr ptsgpvmesr
       61 evrepnevpr akdegerltp hevhasgtrr sgeqkrprws pgssgsfgsg gsgat
//
LOCUS       WP_258053660             221 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidoglycan-binding protein [Streptomyces sp. Ru72].
ACCESSION   WP_258053660
VERSION     WP_258053660.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru72
  ORGANISM  Streptomyces sp. Ru72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 221)
  AUTHORS   Briers,Y., Volckaert,G., Cornelissen,A., Lagaert,S., Michiels,C.W.,
            Hertveldt,K. and Lavigne,R.
  TITLE     Muralytic activity and modular structure of the endolysins of
            Pseudomonas aeruginosa bacteriophages phiKZ and EL
  JOURNAL   Mol Microbiol 65 (5), 1334-1344 (2007)
   PUBMED   17697255
REFERENCE   2  (residues 1 to 221)
  AUTHORS   Gooley,P.R., O'Connell,J.F., Marcy,A.I., Cuca,G.C., Salowe,S.P.,
            Bush,B.L., Hermes,J.D., Esser,C.K., Hagmann,W.K., Springer,J.P. et
            al.
  TITLE     The NMR structure of the inhibited catalytic domain of human
            stromelysin-1
  JOURNAL   Nat Struct Biol 1 (2), 111-118 (1994)
   PUBMED   7656014
REFERENCE   3  (residues 1 to 221)
  AUTHORS   Foster,S.J.
  TITLE     Cloning, expression, sequence analysis and biochemical
            characterization of an autolytic amidase of Bacillus subtilis 168
            trpC2
  JOURNAL   J Gen Microbiol 137 (8), 1987-1998 (1991)
   PUBMED   1683402
REFERENCE   4  (residues 1 to 221)
  AUTHORS   Dideberg,O., Charlier,P., Dive,G., Joris,B., Frere,J.M. and
            Ghuysen,J.M.
  TITLE     Structure of a Zn2+-containing D-alanyl-D-alanine-cleaving
            carboxypeptidase at 2.5 A resolution
  JOURNAL   Nature 299 (5882), 469-470 (1982)
   PUBMED   7121588
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013625.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01471.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Streptomyces sp. Ru72"
                     /db_xref="taxon:2080747"
     Protein         1..221
                     /product="peptidoglycan-binding protein"
                     /calculated_mol_wt=23591
     Region          <12..>195
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          <144..>215
                     /region_name="YcbB"
                     /note="Murein L,D-transpeptidase YcbB/YkuD [Cell
                     wall/membrane/envelope biogenesis]; COG2989"
                     /db_xref="CDD:442228"
ORIGIN      
        1 mstptgqgqs lrrrvpepty vvrrrrteal aelvrelqeg egrppqpgye pivvhlapat
       61 aedateelpp vpsargrrer pvddgltlrr aaitvgvtaa aligfgaall lpgpqgdgte
      121 qhaaappprp patsapaqrt gtdpdgpgtl regdsgpqvt elqkrllrip dvyehgstdg
      181 rydatlaaav arfqlwygir gdetgvygnd trrdlesrtt l
//
LOCUS       WP_258053764             458 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxypeptidase regulatory-like domain-containing protein
            [Streptomyces sp. Ru72].
ACCESSION   WP_258053764
VERSION     WP_258053764.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru72
  ORGANISM  Streptomyces sp. Ru72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13620.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Streptomyces sp. Ru72"
                     /db_xref="taxon:2080747"
     Protein         1..458
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /calculated_mol_wt=48986
     Region          <181..320
                     /region_name="ABC2_membrane"
                     /note="ABC-2 type transporter; cl21474"
                     /db_xref="CDD:473876"
     Region          364..442
                     /region_name="CarboxypepD_reg"
                     /note="Carboxypeptidase regulatory-like domain; pfam13620"
                     /db_xref="CDD:433354"
ORIGIN      
        1 mkhrierprg thlartlaea ltipvllflg llfcfpmafh eprpnhakiv iadlaverkv
       61 dtalqrqhpg gfqvsavada rearqavldr aavagyaarg ghavlyvaka dgaaleqvlt
      121 kgfaqlaahd hqrltvtdva ptvskdelgt tlvyfaiawn vpgyilattl lravtfnrrk
      181 klmtiagvaa lfsvvgffvg aglgffpddp salaiafllt tavatfslgv apftkqffpl
      241 vglglyivls vpssgvapvq llprfyqclh avmplgnavd alkgvlyfhg agvlkpvlvl
      301 sawitagmal lgldawrhhr mavrrgpeqe dvpeppvedp sveaptptal pvhphhfgep
      361 lpmlegtvhd geqqplrhaa vtvmdaggrq lvrtatnarg eyavtglpeg fisvvvsypg
      421 rnpvvrqkll qsgvavrsdf tlhdrrsgvs plaaaprr
//
LOCUS       WP_258053812              71 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6343 family protein, partial [Streptomyces sp. Ru72].
ACCESSION   WP_258053812
VERSION     WP_258053812.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru72
  ORGANISM  Streptomyces sp. Ru72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 71)
  AUTHORS   Larson,C.B., Crusemann,M. and Moore,B.S.
  TITLE     PCR-Independent Method of Transformation-Associated Recombination
            Reveals the Cosmomycin Biosynthetic Gene Cluster in an Ocean
            Streptomycete
  JOURNAL   J Nat Prod 80 (4), 1200-1204 (2017)
   PUBMED   28333450
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039414.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19870.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Streptomyces sp. Ru72"
                     /db_xref="taxon:2080747"
     Protein         1..>71
                     /product="DUF6343 family protein"
     Region          36..>71
                     /region_name="DUF6343"
                     /note="Family of unknown function (DUF6343); pfam19870"
                     /db_xref="CDD:466216"
ORIGIN      
        1 mahekrsrpa ggngppdtrk pvprsrsgfi grrhertgte pvtarsalgl rlllaicytp
       61 lfiaatvlfa m
//
LOCUS       WP_258053817             149 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5709 domain-containing protein [Streptomyces sp. Ru72].
ACCESSION   WP_258053817
VERSION     WP_258053817.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru72
  ORGANISM  Streptomyces sp. Ru72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039203.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18970.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Streptomyces sp. Ru72"
                     /db_xref="taxon:2080747"
     Protein         1..149
                     /product="DUF5709 domain-containing protein"
                     /calculated_mol_wt=15581
     Region          97..145
                     /region_name="DUF5709"
                     /note="Family of unknown function (DUF5709); pfam18970"
                     /db_xref="CDD:465935"
ORIGIN      
        1 mgddvyqpdg sevqddagll dasdtldyra gdqaldegys pperpwgvdr tgvtaserqr
       61 geslderlae evpdigvpdg dgvgdawdtd geliddevgd aragrllapd egshentesd
      121 lvaydvgldg agasaeeaam hvvpdsdty
//
LOCUS       WP_258053835              78 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein, partial [Streptomyces sp. Ru72].
ACCESSION   WP_258053835
VERSION     WP_258053835.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru72
  ORGANISM  Streptomyces sp. Ru72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Streptomyces sp. Ru72"
                     /db_xref="taxon:2080747"
     Protein         1..>78
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
     Region          25..>78
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mlalaheeap attgppdsds sipepenasv livndrgeyl lhlrdqvpgi wepgawsllg
       61 ggrepgdrsl getarrel
//
LOCUS       WP_258053878             457 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Streptomyces sp. Ru72].
ACCESSION   WP_258053878
VERSION     WP_258053878.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru72
  ORGANISM  Streptomyces sp. Ru72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13751.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Streptomyces sp. Ru72"
                     /db_xref="taxon:2080747"
     Protein         1..457
                     /product="transposase"
                     /calculated_mol_wt=50008
     Region          <84..367
                     /region_name="transpos_IS1182"
                     /note="IS1182 family transposase; NF033551"
                     /db_xref="CDD:468080"
ORIGIN      
        1 mdipelahrc eervngwtmp sskskrdrla vvfgqdaltl cravwapgap gwlqeiepva
       61 flrrmlvqty yvstdargre vivkreadke gvppghlrla spydpdarwa akgddlfwlg
      121 ykvhltetcd tsaeaeaeae aeaeaevlpl rlitdvftte asvpdvkatr pvqqnltgrg
      181 ltpgehylda gypsadlihe aagqgiamvt palldhspqa kadagfqksa fridwkvrqa
      241 rcpqgrtstg wfpvrqhgrd aivvqfartd chacpvqdkc ttsargtril slrpkelhet
      301 ltearaeqpt ktwktkyalr agiegtinqa ldvtglrrar yrglpkvrlq hafsatavnv
      361 irleahwnpk qpsftpriqq thlpqpptrs pnpegcgsgs gaaeysaate agpligssfe
      421 altwrcadsg hstdrgcvvq waadsqqsps trtnpsa
//
LOCUS       WP_258053904             414 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein [Streptomyces sp. Ru72].
ACCESSION   WP_258053904
VERSION     WP_258053904.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru72
  ORGANISM  Streptomyces sp. Ru72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 414)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Streptomyces sp. Ru72"
                     /db_xref="taxon:2080747"
     Protein         1..414
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=44385
     Region          5..>109
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mgralegrpd maavlhafaa vmahfealrt lyprdadghp ravvvasgvl qvdeyvsdap
       61 ptydelsaft lrlaepgfap ddlplraavi tvdgrpihia lslhhfsadt taarivaerl
      121 vrlaadpgad lgagwqprqi asfeaspsgl rhahrvdthd ramlrqsvmp elkvpgshrd
      181 avynfvclns aavalaaarl akqyrtsaaa vlqaayacal aehlgigtcv fntvmanrqt
      241 tfareavahi agralvpvdt slggdrfpal cravdaalvr sssvslrepd ryarsldevs
      301 aelgrsahnp yvvnirpiap rtliraradr aqqdlerama ssryrrfpkp vdpysgrlsf
      361 dvwgmsetag islgtdatsf daadleqilr sferrlvraa igghaartgs faga
//
LOCUS       WP_258053924             310 aa            linear   BCT 02-MAR-2025
DEFINITION  methylmalonyl-CoA mutase family protein, partial [Streptomyces sp.
            Ru72].
ACCESSION   WP_258053924
VERSION     WP_258053924.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru72
  ORGANISM  Streptomyces sp. Ru72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 310)
  AUTHORS   Mancia,F., Keep,N.H., Nakagawa,A., Leadlay,P.F., McSweeney,S.,
            Rasmussen,B., Bosecke,P., Diat,O. and Evans,P.R.
  TITLE     How coenzyme B12 radicals are generated: the crystal structure of
            methylmalonyl-coenzyme A mutase at 2 A resolution
  JOURNAL   Structure 4 (3), 339-350 (1996)
   PUBMED   8805541
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013781.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01642.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Streptomyces sp. Ru72"
                     /db_xref="taxon:2080747"
     Protein         1..>310
                     /product="methylmalonyl-CoA mutase family protein"
                     /GO_function="GO:0016866 - intramolecular transferase
                     activity [Evidence IEA]"
                     /GO_function="GO:0031419 - cobalamin binding [Evidence
                     IEA]"
     Region          1..>310
                     /region_name="MM_CoA_mutase"
                     /note="Coenzyme B12-dependent-methylmalonyl coenzyme A
                     (CoA) mutase (MCM)-like family; contains proteins similar
                     to MCM, and the large subunit of Streptomyces coenzyme
                     B12-dependent isobutyryl-CoA mutase (ICM). MCM catalyzes
                     the isomerization of...; cl00817"
                     /db_xref="CDD:469938"
ORIGIN      
        1 mrtyaghsta easnelyrrn lakgqtglsv afdlptqtgy dsdhilarge vgrvgvpvah
       61 lgdmrrlfqd ipleqmntsm tinatamwll alyqvvaeeq gaditklqgt tqndivkeyl
      121 srgthvfppg pslrlttdmi aytvshipkw npinicsyhl qeagatpvqe iayamstaia
      181 vldavrdsgq vpqermgdvv grisffvnag vrfieemckm rafgriwdri trerygiedp
      241 khrrfrygvq vnslglteaq pennvqrivl emlavtlskd araravqlpa wnealglprp
      301 wdqqwslriq
//
LOCUS       WP_258053963            1202 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: S8 family serine peptidase [Streptomyces].
ACCESSION   WP_258053963
VERSION     WP_258053963.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1202
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..1202
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=122810
     Region          204..468
                     /region_name="Peptidases_S8_BacillopeptidaseF-like"
                     /note="Peptidase S8 family domain in
                     BacillopeptidaseF-like proteins; cd07481"
                     /db_xref="CDD:173807"
     Site            order(213,260,302,333,362,432)
                     /site_type="active"
                     /db_xref="CDD:173807"
     Site            order(213,260,432)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173807"
     Region          509..581
                     /region_name="CarboxypepD_reg"
                     /note="Carboxypeptidase regulatory-like domain; pfam13620"
                     /db_xref="CDD:433354"
     Region          <515..>661
                     /region_name="ClfA"
                     /note="Clumping factor A-related surface protein, MSCRAMM
                     (microbial surface components recognizing adhesive matrix
                     molecules) family, DEv-IgG fold [Cell
                     wall/membrane/envelope biogenesis]; COG4932"
                     /db_xref="CDD:443959"
     Region          862..938
                     /region_name="CarboxypepD_reg"
                     /note="Carboxypeptidase regulatory-like domain; pfam13620"
                     /db_xref="CDD:433354"
     Region          958..1019
                     /region_name="BACON_2"
                     /note="Viral BACON domain; pfam19190"
                     /db_xref="CDD:408960"
     Region          1043..1199
                     /region_name="Malectin"
                     /note="Malectin domain; pfam11721"
                     /db_xref="CDD:432024"
ORIGIN      
        1 maqrdkrssq alrptrparp arslrtalaa ltsvlllplg agvaaaapdp gpgvpsaaer
       61 kiepklraql dgsakavfwv yldsaadlta agkqqtraak aetvlrtkkd haarsqadvi
      121 kalegagaey tsywivnavr vvgseklagt laqrpevari daddkvdlpk paegkrekav
      181 adavewnidr ikapqvwdqi gvrgegivva nidsgvdfth pavanqyrgk nadgsyshay
      241 nwfdpagvca gaapcdnndh gthtmgtmvg ddggankigv apgakwiaak gcesnscsea
      301 sllasgqwiv aptdlngqnp rpdlaphivn nswggsggdt wyqqivdtwr aagifpafsn
      361 gnagpgcsts gspgdyassy ssgafdinna iasfssrgag pggivkpnis apgvnvrssv
      421 pggayeafsg tsmasphtaa avallwsaap slegdiaqte slldgtaldt dssqcggnaa
      481 dnnvfgegrl dvlaavnaap rgalgalggt vrsggqplag vkvtadgpid rtattaadgs
      541 ysfpalsvge ytltaakfgy gqqtatatvt engtatgdft ltqaasgkva gtvasasgpt
      601 agaavtiadt pvtattdaqg rfevtlphgt yrvnathasr clsggtaevt vggdttvtvn
      661 lpertdgygy acatagdrpy tagsrqlalt gdnttervdl pfplplygkt yaqawigtng
      721 tvsfggnntg dingdlpsta tpnaalypfw ddlvvgaags gsgvftavtg taphrayvie
      781 wrevahwsaq aekfsfsaai gedgtvtysy kgtggtgikg gstatvgven atgtdafkys
      841 fntpvitdgl siafrttrsg vvagrvldan dgngvagatv tvgtgdtavs attaadggyv
      901 vqspsgsrtv slaaaqyepa tatvdvkaad vttvtqslrt grvtasgpal evvlpadqqr
      961 trtldltnpg lgtaftvsed aawltatpas gdlptggkap vtlsvdttgl apgtvltadl
     1021 kiasasgrtp vltvpvkvvv pryqvgldag sgygstdalg dawspdrkyt agsygyqgng
     1081 tvqstgrtia gtdeqrlfrn aregmyeyrf dnvpngtytv elgfaelsst kpnkrvfdvl
     1141 aegtqvlpsl dialeagtyk altrtytvtv tdgvlnvrfv thsgfgkpll ntlrvtdrpd
     1201 ks
//
LOCUS       WP_258054000             320 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ATP-binding cassette domain-containing protein
            [Streptomyces].
ACCESSION   WP_258054000
VERSION     WP_258054000.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
REFERENCE   1  (residues 1 to 320)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 320)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 320)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 320)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..320
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=33624
     Region          24..>281
                     /region_name="MglA"
                     /note="ABC-type sugar transport system, ATPase component
                     [Carbohydrate transport and metabolism]; COG1129"
                     /db_xref="CDD:440745"
ORIGIN      
        1 mgpqagggeq vttgktttvh pdaaaalvkl tgvskyygni ralqdvslev sageitcvlg
       61 dngagkstli kiiaglhrhd agtfeiegee tvlanpraal dhgiatvyqd lavvplmpvw
      121 rnfflgsept kgrgplrrld vefmrrttra ellrmgidlr dvdqpigtls ggerqcvaia
      181 ravyfgakvl vldeptaalg vkqsgvvlky vaaardaglg vvlithnphh aylvgdrfvl
      241 lkrgtmagsh trdsitldel trqmaggsel delshelerv aesgtgvtda aargagrtgp
      301 adaageasrt taptrddttr
//
LOCUS       WP_258054029             516 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaB-like helicase N-terminal domain-containing protein
            [Streptomyces sp. INR7].
ACCESSION   WP_258054029
VERSION     WP_258054029.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. INR7
  ORGANISM  Streptomyces sp. INR7
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 516)
  AUTHORS   Fass,D., Bogden,C.E. and Berger,J.M.
  TITLE     Crystal structure of the N-terminal domain of the DnaB hexameric
            helicase
  JOURNAL   Structure 7 (6), 691-698 (1999)
   PUBMED   10404598
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012974.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00772.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Streptomyces sp. INR7"
                     /db_xref="taxon:2607753"
     Protein         1..516
                     /product="DnaB-like helicase N-terminal domain-containing
                     protein"
                     /GO_function="GO:0003678 - DNA helicase activity [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /calculated_mol_wt=54926
     Region          33..>234
                     /region_name="PRK07773"
                     /note="replicative DNA helicase; Validated"
                     /db_xref="CDD:236093"
     Region          214..478
                     /region_name="RepA"
                     /note="RecA-family ATPase [Replication, recombination and
                     repair]; COG3598"
                     /db_xref="CDD:442817"
ORIGIN      
        1 mpnptaigpt gtpltthlaq pstlaaagsm nvprneaaem avlgacvyqs eaidrlrqil
       61 epgdfyhpah ttiwralvel rqqqaptdpi alghqlqrtg dlnriggaty lhtlasaaav
      121 gsgaeyyadi vrqqadlram qamavrvlqg atsegadpee vrtllnaslq evtdrsrrss
      181 ggrlqryald gwafvtdtat dtepiwgapg kaawaagesl mlvgppgvgk stiaqqvvla
      241 rigliaqvld mpvqegekvl yiaadrpsql arafsriirp vdekilrqrl vfwsgplpas
      301 liaephllae laaehgadtv vidslkdvvg kltddeagla ynnarqqllr dgvqlmelhh
      361 qrkqgqdasr nqrpildqvy gsawftagag svlflagaag dpivqlhhlk tvndeigplp
      421 ithdhtrgts rvethldplt llrqagtrgl tarqlaeqit getspsqadi akarrrlesl
      481 atsghaaqet gagggsgggq atrwtaaptr qltvvs
//
LOCUS       WP_258054088             291 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: universal stress protein [Streptomyces].
ACCESSION   WP_258054088
VERSION     WP_258054088.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces
  ORGANISM  Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae.
REFERENCE   1  (residues 1 to 291)
  AUTHORS   Sousa,M.C. and McKay,D.B.
  TITLE     Structure of the universal stress protein of Haemophilus influenzae
  JOURNAL   Structure 9 (12), 1135-1141 (2001)
   PUBMED   11738040
REFERENCE   2  (residues 1 to 291)
  AUTHORS   Zarembinski,T.I., Hung,L.W., Mueller-Dieckmann,H.J., Kim,K.K.,
            Yokota,H., Kim,R. and Kim,S.H.
  TITLE     Structure-based assignment of the biochemical function of a
            hypothetical protein: a test case of structural genomics
  JOURNAL   Proc Natl Acad Sci U S A 95 (26), 15189-15193 (1998)
   PUBMED   9860944
REFERENCE   3  (residues 1 to 291)
  AUTHORS   Nystrom,T. and Neidhardt,F.C.
  TITLE     Expression and role of the universal stress protein, UspA, of
            Escherichia coli during growth arrest
  JOURNAL   Mol Microbiol 11 (3), 537-544 (1994)
   PUBMED   8152377
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012791.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00582.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Streptomyces"
                     /db_xref="taxon:1883"
     Protein         1..291
                     /product="universal stress protein"
                     /calculated_mol_wt=30940
     Region          5..136
                     /region_name="AANH_superfamily"
                     /note="Adenine nucleotide alpha hydrolase (AANH)
                     superfamily; cl00292"
                     /db_xref="CDD:469708"
     Region          153..288
                     /region_name="AANH_superfamily"
                     /note="Adenine nucleotide alpha hydrolase (AANH)
                     superfamily; cl00292"
                     /db_xref="CDD:469708"
ORIGIN      
        1 manrvtvgld gspestaaar waaheaelrg asldlvhaee wlenpplpvt tteerrqwae
       61 avlrdtadet hrahpslrvd trrvgglpsl alaraaedsd mlvlgsralg siagflvgst
      121 gaatvieavr pvvlvrsvdr agnppdgtrd rgpivvgvdi hqpcdkllaf afeeashrrc
      181 slviihgwsp ppilsyapal dpgvqqemah gitttldemi spwrekytsl qvdsratigq
      241 paiqildaas taalvvvgrr irhsafgahi gpithavmhh avapvaviah e
//
LOCUS       WP_258054126             444 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein [Streptomyces sp. INR7].
ACCESSION   WP_258054126
VERSION     WP_258054126.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. INR7
  ORGANISM  Streptomyces sp. INR7
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 444)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Streptomyces sp. INR7"
                     /db_xref="taxon:2607753"
     Protein         1..444
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=47980
     Region          <34..427
                     /region_name="RecB"
                     /note="3#-5# helicase subunit RecB of the DNA repair
                     enzyme RecBCD (exonuclease V) [Replication, recombination
                     and repair]; COG1074"
                     /db_xref="CDD:440692"
     Region          <34..100
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 mriinsfgph hgypqplavl seaqrlvgga gpgltysqlv paamellale kvrnhyskry
       61 gliicdefqd tddqewqflq qiapaarril lgdtkqciya gfkhinaetr iaetmqmpga
      121 vritlpplsy rdpsgtlpaa aeaamrrdft hdairtaasa grisvtdyas gyghaevidl
      181 arrarkagdt vsifthtnva tsslsdalla dglvheqvgl teahgealaa qlslvkyald
      241 lpdpgvlrgl avyvqaterk gnrvvplaqq mlnpatnlpl rnalqrlard lrasvgeggq
      301 pdiarlsevi tsaystvgaa rgqetwiqaa rqtsialrha gqgsfdaaav gqellrvrde
      361 alvgtwtarr apiqvmnlhq tkgreadtti lllgsnefhg segepyptgs rllyvvmtra
      421 rqkahlvvpn lvhglwqplv aalr
//
LOCUS       WP_258054156              66 aa            linear   BCT 02-MAR-2025
DEFINITION  triphosphoribosyl-dephospho-CoA synthase, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258054156
VERSION     WP_258054156.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 66)
  AUTHORS   Schneider,K., Dimroth,P. and Bott,M.
  TITLE     Identification of triphosphoribosyl-dephospho-CoA as precursor of
            the citrate lyase prosthetic group
  JOURNAL   FEBS Lett 483 (2-3), 165-168 (2000)
   PUBMED   11042274
REFERENCE   2  (residues 1 to 66)
  AUTHORS   Schneider,K., Dimroth,P. and Bott,M.
  TITLE     Biosynthesis of the prosthetic group of citrate lyase
  JOURNAL   Biochemistry 39 (31), 9438-9450 (2000)
   PUBMED   10924139
REFERENCE   3  (residues 1 to 66)
  AUTHORS   Bott,M. and Dimroth,P.
  TITLE     Klebsiella pneumoniae genes for citrate lyase and citrate lyase
            ligase: localization, sequencing, and expression
  JOURNAL   Mol Microbiol 14 (2), 347-356 (1994)
   PUBMED   7830578
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013991.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01874.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..66
                     /product="triphosphoribosyl-dephospho-CoA synthase"
                     /EC_number="2.4.2.52"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0046917 - triphosphoribosyl-dephospho-CoA
                     synthase activity [Evidence IEA]"
                     /GO_process="GO:0016310 - phosphorylation [Evidence IEA]"
     Region          <22..62
                     /region_name="CitG"
                     /note="ATP:dephospho-CoA triphosphoribosyl transferase;
                     cl00768"
                     /db_xref="CDD:445086"
ORIGIN      
        1 llkqrpsyvf pllpgawewc irdglgeldr rllalnaspg gaadllaacl fldrlpavsg
       61 gwagsl
//
LOCUS       WP_258054161             203 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258054161
VERSION     WP_258054161.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 203)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>203
                     /product="AMP-binding protein"
     Region          3..>165
                     /region_name="PRK08315"
                     /note="AMP-binding domain protein; Validated"
                     /db_xref="CDD:236236"
ORIGIN      
        1 mnqpsytsgr qdvallattv gdafdatvar haerealvvr hqrlryswrq laervdayar
       61 afialglrpg erlgiwapnc aewcitqfas akvgavlvni npayrssele yalkqsgcsw
      121 licadafkts dyhamlgdll pelararpge laserlpelr gvislaavsy thlrahetsq
      181 elvcrlllek kevergecna qlg
//
LOCUS       WP_258054177             303 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing
            protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258054177
VERSION     WP_258054177.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 303)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02737.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>303
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /GO_function="GO:0070403 - NAD+ binding [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
     Region          1..>292
                     /region_name="PRK08268"
                     /note="3-hydroxy-acyl-CoA dehydrogenase; Validated"
                     /db_xref="CDD:236211"
ORIGIN      
        1 mseppivlig ivgtgamgqg iaqlaacagl lvllydsrqg aalqareqia tvlarqverg
       61 rleaeavera mgnlrvvedm rvlrgcqlvi eaivenleak qalfrqleev vgdeailasn
      121 tsslsvtaia sacrdpgrva glhffnpvpl mrlvevidgl atrtgiaerl calvatfghq
      181 svratdspgf ivnhagrafg tealrilgeg vapvaaidev lregagfrmg pfelfdlvgl
      241 dvslpvmesi yrqyyeepry rphpllrqml aagrlgrksg qgfyrydgag pvsythlrah
      301 ets
//
LOCUS       WP_258054189             307 aa            linear   BCT 02-MAR-2025
DEFINITION  thioesterase domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258054189
VERSION     WP_258054189.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Schneider,A. and Marahiel,M.A.
  TITLE     Genetic evidence for a role of thioesterase domains, integrated in
            or associated with peptide synthetases, in non-ribosomal peptide
            biosynthesis in Bacillus subtilis
  JOURNAL   Arch Microbiol 169 (5), 404-410 (1998)
   PUBMED   9560421
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013166.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00975.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..307
                     /product="thioesterase domain-containing protein"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <1..297
                     /region_name="EntF2"
                     /note="Thioesterase domain of type I polyketide synthase
                     or non-ribosomal peptide synthetase [Secondary metabolites
                     biosynthesis, transport and catabolism]; COG3319"
                     /db_xref="CDD:442548"
ORIGIN      
        1 ppapagmsra plaegavald plvrlvpgeg vprvlvhegl gtllpyrpll ralgegrpll
       61 glavhdsday laipaehlna clgrryaeal hraglrevdl lgycsgglva letakslvqr
      121 gvrvrqldiv ssyripyrvd derlllfsfa atlgldtaal gfpaperlgq avqaalaqtp
      181 erlvaealag lpgladlval rgrvlqaasg sadaasverd tlyrlfchsv rasqaaapep
      241 yvgalrlfvp dagnplvpry aetletqwra aalgacgihe vpgghfdclg ealaqslskp
      301 mpeeasr
//
LOCUS       WP_258054204             196 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258054204
VERSION     WP_258054204.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 196)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>196
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          1..>183
                     /region_name="PRK07524"
                     /note="5-guanidino-2-oxopentanoate decarboxylase"
                     /db_xref="CDD:236041"
ORIGIN      
        1 mttcgeflvk qleawgvetv fgipgvhtve lyrglpgsri rhvtprheqg agfmadgyar
       61 vtgkpgvcfi itgpgmtnil tamaqayads ipmlvissvn erarlahgng ylhelpnqrn
      121 lvgnvcafsh tlmsaeelpa vlarafavfd serprpvhie lpldvitapa ehlalrprtl
      181 asrcllytsp sprdis
//
LOCUS       WP_258054246             172 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase family protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258054246
VERSION     WP_258054246.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00725.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..172
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
     Region          <14..168
                     /region_name="PRK08268"
                     /note="3-hydroxy-acyl-CoA dehydrogenase; Validated"
                     /db_xref="CDD:236211"
ORIGIN      
        1 emsrglgdvy krqdlssavq rfacpaersv gidllcdler rrclmlsplt tpamrdaaha
       61 llagdgvgvt vlrdspgfvv qrvlamivnl acdiaqqgia svedidqavh lglgyphgpl
      121 ewgdrlgprr llsilqrlqt ltgdpryrps pwlrrraqlg mslragetaa vg
//
LOCUS       WP_258054249             133 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258054249
VERSION     WP_258054249.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 133)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..133
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <14..128
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 rclvgsemci rdrfreellm ilpaehppvh dvaevrlrtl agfargctyr qlaedslgtp
       61 ltvqevgsyh ailacvaaga cvgvlprsvl qllgtpplrs lplaevdtwl vwregyataa
      121 ferwrgvlgq agd
//
LOCUS       WP_258054256              93 aa            linear   BCT 02-MAR-2025
DEFINITION  nitroreductase family protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258054256
VERSION     WP_258054256.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 93)
  AUTHORS   de Oliveira,I.M., Henriques,J.A. and Bonatto,D.
  TITLE     In silico identification of a new group of specific bacterial and
            fungal nitroreductases-like proteins
  JOURNAL   Biochem Biophys Res Commun 355 (4), 919-925 (2007)
   PUBMED   17331467
REFERENCE   2  (residues 1 to 93)
  AUTHORS   Hecht,H.J., Erdmann,H., Park,H.J., Sprinzl,M. and Schmid,R.D.
  TITLE     Crystal structure of NADH oxidase from Thermus thermophilus
  JOURNAL   Nat Struct Biol 2 (12), 1109-1114 (1995)
   PUBMED   8846223
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013077.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00881.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>93
                     /product="nitroreductase family protein"
     Region          1..>55
                     /region_name="Nitro_FMN_reductase"
                     /note="nitroreductase family protein; cl00514"
                     /db_xref="CDD:444950"
ORIGIN      
        1 mealdalltr vsharlsdpa pspeqldrlf rvalrapdhg qlrpwrfilv egkgrralgd
       61 lyalslihis eptrhlrisy avfclkqksm qat
//
LOCUS       WP_258054258             157 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase family protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258054258
VERSION     WP_258054258.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00725.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..157
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
     Region          <14..153
                     /region_name="PRK08268"
                     /note="3-hydroxy-acyl-CoA dehydrogenase; Validated"
                     /db_xref="CDD:236211"
ORIGIN      
        1 rclvgsemci rdsslaidvl sdlerhrclm acpatraelq qaartlfard gvgvtlirds
       61 agfivqrtla sivnlacdia qqgiasvehi dlavrlglgy plgplewgdr mgagrvlril
      121 erlhalsgdp ryrpspwlrr raqlglslrq pdsplas
//
LOCUS       WP_258054267            1211 aa            linear   BCT 02-MAR-2025
DEFINITION  protein kinase domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258054267
VERSION     WP_258054267.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 1211)
  AUTHORS   Hunter,T. and Plowman,G.D.
  TITLE     The protein kinases of budding yeast: six score and more
  JOURNAL   Trends Biochem Sci 22 (1), 18-22 (1997)
   PUBMED   9020587
REFERENCE   2  (residues 1 to 1211)
  AUTHORS   Hanks,S.K. and Hunter,T.
  TITLE     Protein kinases 6. The eukaryotic protein kinase superfamily:
            kinase (catalytic) domain structure and classification
  JOURNAL   FASEB J 9 (8), 576-596 (1995)
   PUBMED   7768349
REFERENCE   3  (residues 1 to 1211)
  AUTHORS   Hanks,S.K. and Quinn,A.M.
  TITLE     Protein kinase catalytic domain sequence database: identification
            of conserved features of primary structure and classification of
            family members
  JOURNAL   Methods Enzymol 200, 38-62 (1991)
   PUBMED   1956325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00069.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..1211
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>1211
                     /product="protein kinase domain-containing protein"
                     /GO_function="GO:0004672 - protein kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006468 - protein phosphorylation
                     [Evidence IEA]"
     Region          16..485
                     /region_name="SPS1"
                     /note="Serine/threonine protein kinase [Signal
                     transduction mechanisms]; COG0515"
                     /db_xref="CDD:440281"
     Region          <262..785
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          832..>989
                     /region_name="TIGR00376"
                     /note="DNA helicase, putative"
                     /db_xref="CDD:273041"
     Region          862..>921
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            884..890
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
ORIGIN      
        1 mcirdraeat pqpavtetli dgwrllrqia ssdgvreryl aehaesarqa vltlyrpgae
       61 pdpaiydvir rlprehvpei latgrwdera yevveeltgg sladlgtvle dreavrhvvr
      121 elghalhvfn eaglrhrdlr pasllvrshe pldlvisgfg sarlsefdld ivspletsry
      181 mapeaiaggv aaasdwwslg milleqltrg acfegvnana flihvlangv alpddldpql
      241 hlllrgllar drhqrwqwpq vqawlngeav dapasadsek ddaegasial garrfrkptv
      301 falaaaqaeh waealdhllr gaivtwaehi glsprllagl rqvaqhegle ddfrlmlalk
      361 llnpeipliq rgeivtpgwl lehplegyrl isgsvpdlle qlhteswlsr lktraenvrq
      421 ralhqhiela eeqlrtylls tsrarlaaqw qerqrllpdt ehpgllalae rrviaeedli
      481 vllsanigqf raaeaiveea aglardadvh lfdaetargl lqhsrqelyr rvderisgfa
      541 rsgvprvdew aeqfrlerrm plarvlvlla ippeqwlepq kqqyvsqild ffekkvvaav
      601 mrgplvrmsi gkstpridln elhsarrpaa alldhllqrn aravsldpds flanpqlevr
      661 lnalsrqssl ykrdtgidgl ylgfpfllnr dprgttrtri vplllwplkl qlevgsrgqv
      721 alafdgeree vrlnpalesl lgpepckrwr kvadellgrs alraadvmda fgllatprar
      781 vleglppsst evtpyqdqla caavlfhvtf mgqaigedlr qlkslppsgt gletalrlre
      841 ngepearesp pelqryftva sdpsqeaavl qarqspgllv egppgtgksq tivnmvadai
      901 grqrsllivc qkhaalevvh krlvaeglgq rivmlndvnr drepvirnir eqlealfada
      961 ggtqgwerqr erlaarieal egeldryhqs lhrvdeatgl syrrllgeli elekgsppld
     1021 fpalrqrlaa ldigslarle encaplvrlw lparyegspl aqlrafatdq atlqafadsl
     1081 rafgeaenar qkaldehpas fevddptpyr awlasqvgtl lnlreeqrqr lahwlplfrd
     1141 aapgqpsrgd gllaeaeqie rqlrqldler hapllspala mleennlerf qaharqvlea
     1201 vsythlrahe t
//
LOCUS       WP_258054271             226 aa            linear   BCT 02-MAR-2025
DEFINITION  MATE family efflux transporter, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258054271
VERSION     WP_258054271.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01554.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>226
                     /product="MATE family efflux transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          13..>212
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 msllrdawrh apthhrvwal agpmilsnvs vplvhlvdst vvghlphayq lgavavggsl
       61 ytlmvgvlgf lrmgttgfaa qaagrddggs lrlilaqglg malllalllg alalplsgwa
      121 lqlmqpsael tgearaffht rllglpaala syalvgwflg tqnaraplai llttnlsnia
      181 lvlwfvhgld wgvqgaaras vlaewsgall glapvsythl rahets
//
LOCUS       WP_258054275             175 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258054275
VERSION     WP_258054275.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 175)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>175
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          9..>149
                     /region_name="COG4908"
                     /note="Uncharacterized conserved protein, contains a NRPS
                     condensation (elongation) domain [General function
                     prediction only]"
                     /db_xref="CDD:443936"
ORIGIN      
        1 mmaeirrpls averwywlsd qfsalnvisr vrvhgrlsid dlrrgldalq arhpllrari
       61 ehdagldprw vpcerpiplr evrgggeeqw lreinerelp eridpdsgpl irtvaiatda
      121 gahdllvvvp hiiadgttvl tlaeqwltla adpaaqpwta sapvsythlr ahets
//
LOCUS       WP_258054278             353 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258054278
VERSION     WP_258054278.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 353)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..353
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
     Region          <14..321
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
ORIGIN      
        1 rclvgsemci rdssghmata ervaaailra aertgmpagv fnmiygggvg erlvrhpaiq
       61 avgftgslkg gralcdmaaa raqpipvfae mssinpvvll paalkkrgea vadelsasvv
      121 lgcgqfctnp glvigirsaq fsaflerfaa rmddqpaqtm lnagtlasye kglaalhahp
      181 rvrhlagqpq egrqarpqlf qadvsllleg dellqeevfg pasvvvevad haelkralhg
      241 lhgqltatli aeaedlasfa dlvplleqka grlllngypt gvevcdamvh ggpypatsda
      301 rgtsvgtlai drflrpvcyq nypdawlpea lkdgnplgia rlvdgvgtra aid
//
LOCUS       WP_258054432             215 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme [Pseudomonas
            aeruginosa].
ACCESSION   WP_258054432
VERSION     WP_258054432.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..215
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /calculated_mol_wt=24025
     Region          <1..210
                     /region_name="CsdA"
                     /note="Selenocysteine lyase/Cysteine desulfurase [Amino
                     acid transport and metabolism]; COG0520"
                     /db_xref="CDD:440286"
ORIGIN      
        1 mfldashavg qlplaveaig cdvlvfpprk wlrgpkglgv lylgeraler lalpdgldvg
       61 gaqwsdafal qarddarrfe csefnpglrl alkascdyll qtdvrriarr nrqlreriaq
      121 qlyrrlgwtp leqgphasal mtyaapelsg eqwlkrlhar gvnasyigpq yarwalreqa
      181 lpgvlrltph yltddgeier lgealedclr qraas
//
LOCUS       WP_258054552            1365 aa            linear   BCT 02-MAR-2025
DEFINITION  SpaA isopeptide-forming pilin-related protein [Bacillus cereus].
ACCESSION   WP_258054552
VERSION     WP_258054552.1
KEYWORDS    RefSeq.
SOURCE      Bacillus cereus
  ORGANISM  Bacillus cereus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 1365)
  AUTHORS   Kang,H.J., Paterson,N.G., Gaspar,A.H., Ton-That,H. and Baker,E.N.
  TITLE     The Corynebacterium diphtheriae shaft pilin SpaA is built of tandem
            Ig-like modules with stabilizing isopeptide and disulfide bonds
  JOURNAL   Proc Natl Acad Sci U S A 106 (40), 16967-16971 (2009)
   PUBMED   19805181
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2009 Oct 27;106(43):18427]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037639.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17802.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1365
                     /organism="Bacillus cereus"
                     /db_xref="taxon:1396"
     Protein         1..1365
                     /product="SpaA isopeptide-forming pilin-related protein"
                     /calculated_mol_wt=148007
     Region          187..>682
                     /region_name="ClfA"
                     /note="Clumping factor A-related surface protein, MSCRAMM
                     (microbial surface components recognizing adhesive matrix
                     molecules) family, DEv-IgG fold [Cell
                     wall/membrane/envelope biogenesis]; COG4932"
                     /db_xref="CDD:443959"
     Region          630..1302
                     /region_name="ClfA"
                     /note="Clumping factor A-related surface protein, MSCRAMM
                     (microbial surface components recognizing adhesive matrix
                     molecules) family, DEv-IgG fold [Cell
                     wall/membrane/envelope biogenesis]; COG4932"
                     /db_xref="CDD:443959"
     Region          996..>1050
                     /region_name="SpaA"
                     /note="Prealbumin-like fold domain; pfam17802"
                     /db_xref="CDD:465513"
     Region          <1265..1353
                     /region_name="pullulan_Gpos"
                     /note="pullulanase, extracellular, Gram-positive;
                     TIGR02102"
                     /db_xref="CDD:273973"
ORIGIN      
        1 mnflrksfnq kikklsssli vvllicmnfl ihlpfkaeaa ttelkglgdv syynaiifgd
       61 hsatsadieg amavqknmna ssytvvaaat gannlagatw vdegypslll ggqftkagag
      121 qviiqdgtva mtkdgdpdga mktsydrisy keqaeidakf kefrkgvdsv iedagqlhtd
      181 kpksgmtfgi gedvknpniy vssglegqep fnvkdvylpn vsnkdfivih sdaeevnfgg
      241 gailydttdk ggftlvntsq aydpnsffte laskviwvfp natkittkgy gvvgsvfapn
      301 avvetkggsi ngqayvgglh qrdgfevhnf kfnwpkwnkp atekghlqik kvdendeniv
      361 lkdakfdvid kdnnvvatvt tnekgiaevk dlplgdyfvk einapegyik vdtpvkvtid
      421 ntnvielvmk ntrkvengqf kllkkdsesg qllpgakfdv idkdgkvvet ivtddkgeal
      481 skqlpvgsyt lkeveapkgy elssssvsvd veankvvtvd vvnkkipekv tgqfeivkvd
      541 aedktkvlsd aefevykdgk kvdtlrtdkt gkvvsqklep gkytlketka pqgykllkee
      601 ievvveankv vevqienake lgslqvikkd aesetvlaga efklkneagq vvgeakttnk
      661 egvvkfenlv pgkytleetk apegykalev tvevnvvane vvkqevmnek vtgqfeivkv
      721 dandktklls gaefevykdg kkvaelktde sgkvmspklp lgeytvketk apagyklsnk
      781 ewkvtiqnek evvkveaene kilgslqiik mddkdqtkrl agaqftlkda kgnvvkegit
      841 tdksgtvkvd glvpgeytle etkapegyel tkqiihvtvd gekvvdvkvt nskslgqfei
      901 vkvdaedktk vlsdaefevy kdgkkvdtlr tdktgkvvsq klepgkytlk etkapqgykl
      961 lkeeievvve ankvvevqve nakelgslqv tkkdsesgkv lagaefklkn eagqvvgeak
     1021 ttnkdgvvkf enlvpgkytl eetkapegyk alevtvevnv vanevvkqev mnekvkeeit
     1081 gqleitkvda nntnkilaga vfeiwkdgtk idtlttnksg katskklepg dytlkeiqap
     1141 egytlsdkem kftisnekie vvklqitnek dtekgpekpg egtekpgegt ekpgegtekp
     1201 gegtekpgeg tekpgegtek pgegtekpge gtekpgegte kpgegtekpg egtekpgegt
     1261 ekpgegtekp gegtekpgeg tekpgegtek pgegtekpge gtekpgegte kpgegvekpn
     1321 lpekgqgssn nqrlpatghn tnyvpfigfm llllgirlrf makns
//
LOCUS       WP_258054583             365 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Streptomyces sp. Ru71].
ACCESSION   WP_258054583
VERSION     WP_258054583.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru71
  ORGANISM  Streptomyces sp. Ru71
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 365)
  AUTHORS   Woodson,K. and Devine,K.M.
  TITLE     Analysis of a ribose transport operon from Bacillus subtilis
  JOURNAL   Microbiology (Reading) 140 (Pt 8), 1829-1838 (1994)
   PUBMED   7921236
REFERENCE   2  (residues 1 to 365)
  AUTHORS   Hogg,R.W., Voelker,C. and Von Carlowitz,I.
  TITLE     Nucleotide sequence and analysis of the mgl operon of Escherichia
            coli K12
  JOURNAL   Mol Gen Genet 229 (3), 453-459 (1991)
   PUBMED   1719366
REFERENCE   3  (residues 1 to 365)
  AUTHORS   Adams,M.D., Wagner,L.M., Graddis,T.J., Landick,R., Antonucci,T.K.,
            Gibson,A.L. and Oxender,D.L.
  TITLE     Nucleotide sequence and genetic characterization reveal six
            essential genes for the LIV-I and LS transport systems of
            Escherichia coli
  JOURNAL   J Biol Chem 265 (20), 11436-11443 (1990)
   PUBMED   2195019
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014684.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02653.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Streptomyces sp. Ru71"
                     /db_xref="taxon:2080746"
     Protein         1..365
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=36786
     Region          2..361
                     /region_name="XylH"
                     /note="ABC-type xylose transport system, permease
                     component [Carbohydrate transport and metabolism];
                     COG4214"
                     /db_xref="CDD:443360"
ORIGIN      
        1 mvwlvfqafn shflsprnls sisvdmvgtg mlalglvfvl algeidlsvg svaglatvvf
       61 arlnvdtgvp eglaallavl tgaaigalqg flharsgvpa yvitlagllg wygltlyllg
      121 asgtldfddt glvaslatsy lgnpaaaygl aavatgafll tclrsrrrrr aagmpslavs
      181 tivlragtla avafaaagvl naflglpval lvflaaavvl nyllrrmpyg rkvfalgsag
      241 eaarragidv trvrvsvfvi sgamaavggl flasptasti qpsssptlll salaaavlgg
      301 aslfgargtt wsaflgilvi qsiasgvall giqaalhfvi tagvllaavl idstsrraqr
      361 ahgla
//
LOCUS       WP_258054702             395 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Streptomyces sp. Ru71].
ACCESSION   WP_258054702
VERSION     WP_258054702.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru71
  ORGANISM  Streptomyces sp. Ru71
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Streptomyces sp. Ru71"
                     /db_xref="taxon:2080746"
     Protein         1..395
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=39512
     Region          27..382
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(33..34,37..38,41,73,123..124,126..128,131,151,
                     154..155,158,224,227..228,231..233,236,261,265,314..315,
                     319,323,339,342..343,346..347,350)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mtettdaggr srtprppllt rplllrcvsi lgastsfyll lsvvpgyasa dgaggrsagl
       61 atgalmagtv vgelatpalv rrhgyravla vglallgvpa laltssralw wiaaicllrg
      121 ggfaftvvag galtaalipa errgeglalv gvvggvpall alplsvwlva hvghtvvfta
      181 galaalaail avpglpdrir asgrpvsiae glrtpglrrp avvfaaiava agivvtflpl
      241 avpdsatgll avalfvqpaa ttvarwlagr hgdrhdaaal vlpglllaaa gtllmalttt
      301 plavlvaagv fgigfgiaqn atltlmyarv plagygtvsa lwnvaydagm gvgalvfgal
      361 adrtgypwaf altgtamlaa laparrdrag harra
//
LOCUS       WP_258054795             190 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258054795
VERSION     WP_258054795.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 190)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>190
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          1..>185
                     /region_name="PRK07524"
                     /note="5-guanidino-2-oxopentanoate decarboxylase"
                     /db_xref="CDD:236041"
ORIGIN      
        1 mttcgeflvk qleawgvetv fgipgvhtve lyrglpasri rhvtprheqg agfmadgyar
       61 vtgkpgvcfi itgpgmtnil tamaqayads ipmlvissvn erarlahgng ylhelpnqrn
      121 lvgnvcafsh tlmsaeelpa vlarafavfd serprpvhie lpldvitapa eplalalitl
      181 sqppatrlpp
//
LOCUS       WP_258054800             507 aa            linear   BCT 02-MAR-2025
DEFINITION  ADP-ribosylglycohydrolase family protein [Streptomyces sp. Ru71].
ACCESSION   WP_258054800
VERSION     WP_258054800.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru71
  ORGANISM  Streptomyces sp. Ru71
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 507)
  AUTHORS   Takada,T., Iida,K. and Moss,J.
  TITLE     Cloning and site-directed mutagenesis of human ADP-ribosylarginine
            hydrolase
  JOURNAL   J Biol Chem 268 (24), 17837-17843 (1993)
   PUBMED   8349667
REFERENCE   2  (residues 1 to 507)
  AUTHORS   Piatigorsky,J., Horwitz,J. and Norman,B.L.
  TITLE     J1-crystallins of the cubomedusan jellyfish lens constitute a novel
            family encoded in at least three intronless genes
  JOURNAL   J Biol Chem 268 (16), 11894-11901 (1993)
   PUBMED   8505315
REFERENCE   3  (residues 1 to 507)
  AUTHORS   Fitzmaurice,W.P., Saari,L.L., Lowery,R.G., Ludden,P.W. and
            Roberts,G.P.
  TITLE     Genes coding for the reversible ADP-ribosylation system of
            dinitrogenase reductase from Rhodospirillum rubrum
  JOURNAL   Mol Gen Genet 218 (2), 340-347 (1989)
   PUBMED   2506427
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03747.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Streptomyces sp. Ru71"
                     /db_xref="taxon:2080746"
     Protein         1..507
                     /product="ADP-ribosylglycohydrolase family protein"
                     /calculated_mol_wt=50947
     Region          4..290
                     /region_name="DraG"
                     /note="ADP-ribosylglycohydrolase [Posttranslational
                     modification, protein turnover, chaperones]; COG1397"
                     /db_xref="CDD:441007"
     Region          <349..>472
                     /region_name="PspC_subgroup_2"
                     /note="pneumococcal surface protein PspC, LPXTG-anchored
                     form; NF033839"
                     /db_xref="CDD:468202"
ORIGIN      
        1 masirerarg allglavgda lgapaenlkp seirarwgrv tgfvaaepag tddteyaifs
       61 glllarhgsa ltpadveaaw hewiadraeg pfkgagfser gtlenlrrgl aapisaqhrh
      121 awsdglamra avsgvhaagr paeaarlaai dgsvshdgeg iyggqavaag vaaamggasp
      181 eavvaaaltv vpddswtars lrravtaahg geravrsavv iggypwtdla peavalafga
      241 yaaadgefrd avltavnmgr dadttaavag alagatqgva aipadwasai gpargsclpa
      301 mkgrhvleva dllvagrdva grevagrdaa epaasgtdat rilvpdfvpd tlegpavpvp
      361 dirqeptapv pdtrevptip aaatweapta svpdtpvept mpaaatweap tapmaatsee
      421 ptaslpgtle epsaplpgtl eepsaplpdp veestapvpd treepptpag qpveagggwa
      481 paargvrapg plvpavdpgd dgnears
//
LOCUS       WP_258054816             750 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Pseudomonas
            aeruginosa].
ACCESSION   WP_258054816
VERSION     WP_258054816.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..750
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=82465
     Region          <1..>40
                     /region_name="PRK08162"
                     /note="acyl-CoA synthetase; Validated"
                     /db_xref="CDD:236169"
     Region          66..746
                     /region_name="PRK04841"
                     /note="HTH-type transcriptional regulator MalT"
                     /db_xref="CDD:235315"
ORIGIN      
        1 mlihaehasv pavpvsvitg gapppsavia amgargfstt papaldacld rllsaasprv
       61 gwwlasrrrp qcnlarllle gellevdggl lafdadevae llrlhgrsad aatagaller
      121 sggwcaalrl rllvgeetag pllqeylqhe lldelpppla gaaralawlp qvgpelfrrl
      181 feelphgldd llargfplla dtsqryslpp aireawreap qrpqrdfhre acewfaehge
      241 treavdqala adepetaagl lqklteeqll hghnigmvla lrdelpaall astprlviln
      301 awallyagrl aeaedcigql arflpmpsas rqrvllaqwq glfgillhcr gergaadylr
      361 ealeqlpeda wsqglicrsa lmqlamiegr mdqarligrd alrlarehds lifealiele
      421 raqwleqrge llraegvldr aqryledlgq qgspmlgria lrrarlclqq greveaghwy
      481 rlgleqaren ldpwalygyl glalleagqg dldaafnrll everlmqqrh vpdplyrgal
      541 llvssaltlq qgrpaqarei llrvrayfqp grarlsppse pelearvehq lalaelysge
      601 aaaaearlrg llaileaqgr qtllcevrmg iaecqflsgq lpqaqqtlrs glelaerlgl
      661 qlpqrrlrdr qpqlfaalpg eeeeglspls crelavlgli aqgcsnqeig eqlfislhtv
      721 ktharringk lgvarrtqav arakalglla
//
LOCUS       WP_258054849             336 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase [Streptomyces sp. Ru71].
ACCESSION   WP_258054849
VERSION     WP_258054849.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru71
  ORGANISM  Streptomyces sp. Ru71
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 336)
  AUTHORS   Keller,N.P., Dischinger,H.C. Jr., Bhatnagar,D., Cleveland,T.E. and
            Ullah,A.H.
  TITLE     Purification of a 40-kilodalton methyltransferase active in the
            aflatoxin biosynthetic pathway
  JOURNAL   Appl Environ Microbiol 59 (2), 479-484 (1993)
   PUBMED   8434913
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013087.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00891.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Streptomyces sp. Ru71"
                     /db_xref="taxon:2080746"
     Protein         1..336
                     /product="methyltransferase"
                     /GO_function="GO:0008171 - O-methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=36466
     Region          9..>61
                     /region_name="HTH_CRP"
                     /note="helix_turn_helix, cAMP Regulatory protein
                     C-terminus; DNA binding domain of prokaryotic regulatory
                     proteins belonging to the catabolite activator protein
                     family; cl46859"
                     /db_xref="CDD:481199"
     Region          92..277
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(159..164,168,185..186,211..213,227)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
ORIGIN      
        1 mtlvscfelg iidalrkksh ltaaelgeva gakpdaveql llllvkegfv ahdeatgryc
       61 ldglagvsdt lleqaladln mikavtlrql fyltesvrsg svaglkelyg hegdlysalg
      121 elpelrepwa klmntvtahv dpwffdnvdi pagsrvldla gntglgaint lklkdspglr
      181 vttfdlpeke keclenfrah gvedrcafig gdvfvevpkg fdvvlvkhfl pmfdksdvlr
      241 ildgihrsld vgaqvhvlvp vfpenladte nytvdfypsf figctmgqgg pqklstwqsw
      301 leesgfqvtk aitddpanlp phaltveavl satkva
//
LOCUS       WP_258054879             841 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258054879
VERSION     WP_258054879.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>841
                     /product="Ig-like domain-containing protein"
     Region          <3..405
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          <214..>598
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          <460..>841
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 ltdgngnpia evtadgsgnw tytpstpian gtvvnvvaqd aagnsspgas vtvdsqapaa
       61 pvlnpsngtt lsgtaepgat vtltdgngnp igqvtadgsg nwsftpgtpl angtvvnata
      121 sdptgntsap asttvdsvap aapvvnpsng aeisgtaepg atvtltdgsg npigqvtadg
      181 sgnwsftpst pladgtvvna tatdpagntg gqgsttvdai apatptvnls ngsslsgtae
      241 pgstviltdg ngnpiaevta dgsgnwtytp stpiangtvv nvvaqdaagn ssppatvtvd
      301 ssappapvin psngvvisgt aeagatvtlt daggnpigqv tadgsgnwsf tpgtplangt
      361 vivatatdpt gnsgpqaatt vdavappapv idpsngttis gtaeagakvi ltdgngnpig
      421 ettadgsgnw tftpatplan gtvvnavaqd pagntgpqgs ttvdavapnt pvvnpsngnl
      481 lngtaepgst vtltdgngnp igqttadgsg nwsftpgsql pngtvvnvta sdaagntspp
      541 atttvdsslp sipqvdpsng svisgtadag ntiiitdgng npigqvtadg sgnwsfspgi
      601 plpdgtvvnv varspsnvds apavitvdgv apaapvidps ngteisgtae agatviltdg
      661 ggnpigqata dgsgnwtftp vtplangtvi navaqdpagn tsgpasvtvd aiappapvid
      721 psngvvisgt aeagatvilt dgngnpigqv tadgsgnwaf tpatplangt vinalaqdaa
      781 gnnssptsat vdslapaapv idpsngsvia gtaeagatvi ltdgngnpig qvtadgsgnw
      841 s
//
LOCUS       WP_258054878             877 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258054878
VERSION     WP_258054878.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..877
                     /product="Ig-like domain-containing protein"
     Region          <1..57
                     /region_name="Big_6"
                     /note="Bacterial Ig domain; pfam17936"
                     /db_xref="CDD:465576"
     Region          <54..593
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          597..848
                     /region_name="COG2931"
                     /note="Ca2+-binding protein, RTX toxin-related [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:442175"
ORIGIN      
        1 atviltdgng npigqvtadg sgnwsftpgt plangsvina laqdaagnts gpasttvdav
       61 apatpvldps ngtvisgtae agatviltdg ggnpigqata dgsgnwsftp gtpltngtvi
      121 navaqdaagn tsgpvsttvd avapatpvid psngvelsgt aepgvrvilt dgngnpigqt
      181 ladgsgnwtf tpgtplangt vvnavaqdpa gntsgpastt vdtvapatpv inasngsvit
      241 gtaevgakvi ltdgngnpig ettadgsgnw tftpgtplan gtvinavaed aagnasgpas
      301 ttvdsvapsa pllsisadga lltgtaepns qvrivvngdt anpitvtvdg agnfslpfap
      361 plitgeliag vavdaagnvs gpatinapdl apptisvpea adtwinaaei gdgiqvdvtv
      421 rptmqvgqvv tvkfagqngy eaevshtlta gdiaagnltl tltppggmgp fpegastvta
      481 dinggtastp vpftidtipp atpvlslvgn iltisaepgt eltvtvdvgg vtatatvtad
      541 nsglaslnll tdldidfswd qllnaqvsvv grdpagnpsn tasigvgtsi eqpvtignfg
      601 ldvslnplnp rfgfsgttep dssvvirvit palnvellpi qadssgnfsl nllsptiltq
      661 lglnitdiln lgsqisfnlv stdsngndsa aygitltpng lslnigqidv ngtsgddvls
      721 gangssehin ggdgsdlifn vgtgdhvvag ngndtiqita tdfvsidgga gfdtlvlang
      781 idldynavgv gtlsnlerid lgkgdsgsvl tltaaevdai tdanntlqit genndtlnvv
      841 gavntgttql ingitydvyt fgsttllied ntvqvvv
//
LOCUS       WP_258054948             194 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258054948
VERSION     WP_258054948.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 194)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..194
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <1..194
                     /region_name="PRK07524"
                     /note="5-guanidino-2-oxopentanoate decarboxylase"
                     /db_xref="CDD:236041"
ORIGIN      
        1 araarlraei raahaplqal hqaildriaa alpadafvst dmtqlaytgn yafasraprs
       61 wlhptgygtl gyglpagiga klgapqrpgl vlvgdggfly taqelatase eldsplvvll
      121 wnndalgqir ddmlgldiep vgvlprnpdf allgraygca vrqpqdldel erdlragfgq
      181 pgvtlielrh acar
//
LOCUS       WP_258054953             117 aa            linear   BCT 02-MAR-2025
DEFINITION  STAS domain-containing protein [Streptomyces sp. Ru71].
ACCESSION   WP_258054953
VERSION     WP_258054953.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru71
  ORGANISM  Streptomyces sp. Ru71
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 117)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The STAS domain - a link between anion transporters and
            antisigma-factor antagonists
  JOURNAL   Curr Biol 10 (2), R53-R55 (2000)
   PUBMED   10662676
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024857.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13466.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Streptomyces sp. Ru71"
                     /db_xref="taxon:2080746"
     Protein         1..117
                     /product="STAS domain-containing protein"
                     /calculated_mol_wt=12340
ORIGIN      
        1 mdsrygipag sadvapaltl lplpgrsglr amgeislgtr geweralegv lcededeyyl
       61 elsavtfvdv agvgalaaaa qrlpdgrriv lhrppavvrr vldmlwpgia aievsms
//
LOCUS       WP_258054961              56 aa            linear   BCT 02-MAR-2025
DEFINITION  isocitrate/isopropylmalate family dehydrogenase [Streptomyces sp.
            Ru71].
ACCESSION   WP_258054961
VERSION     WP_258054961.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru71
  ORGANISM  Streptomyces sp. Ru71
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012407.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00180.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..56
                     /organism="Streptomyces sp. Ru71"
                     /db_xref="taxon:2080746"
     Protein         1..56
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /GO_function="GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /calculated_mol_wt=5553
     Region          <3..54
                     /region_name="LeuB"
                     /note="Isocitrate/isopropylmalate dehydrogenase [Energy
                     production and conversion, Amino acid transport and
                     metabolism]; COG0473"
                     /db_xref="CDD:440241"
ORIGIN      
        1 mgsaalmldh lglpeqaarl hraieatara gvltrdvggt astedvtkal idalag
//
LOCUS       WP_258054983             171 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase, partial [Streptomyces sp. Ru71].
ACCESSION   WP_258054983
VERSION     WP_258054983.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru71
  ORGANISM  Streptomyces sp. Ru71
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012371.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00144.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Streptomyces sp. Ru71"
                     /db_xref="taxon:2080746"
     Protein         1..>171
                     /product="serine hydrolase"
     Region          56..>169
                     /region_name="AmpC"
                     /note="CubicO group peptidase, beta-lactamase class C
                     family [Defense mechanisms]; COG1680"
                     /db_xref="CDD:441286"
ORIGIN      
        1 mtgeqgtpwp dttagdglda qpamdglreq pavdglreqp avdglreqpv vpglreqpad
       61 gdeerlrerl aaavdacdap davfalsrhg rrtvhcgghr tapvpreslr yelgsasktf
      121 tglllarliq rgvltggepa aaclapgrat rtggitlahl vthtaglpal p
//
LOCUS       WP_258055115             191 aa            linear   BCT 02-MAR-2025
DEFINITION  antibiotic biosynthesis monooxygenase [Streptomyces sp. Ru71].
ACCESSION   WP_258055115
VERSION     WP_258055115.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru71
  ORGANISM  Streptomyces sp. Ru71
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 191)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015925.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03992.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Streptomyces sp. Ru71"
                     /db_xref="taxon:2080746"
     Protein         1..191
                     /product="antibiotic biosynthesis monooxygenase"
                     /calculated_mol_wt=21040
     Region          14..191
                     /region_name="COG3224"
                     /note="Antibiotic biosynthesis monooxygenase (ABM)
                     superfamily enzyme [General function prediction only]"
                     /db_xref="CDD:442457"
ORIGIN      
        1 mltavsleht tvpadtgevt lliarrvepg heaaferwak giletaatfp ghlgygffrs
       61 sggdapwflv hrfrdaeacr awqesperaa wfadceghhh teiarrqltg metwfakpgs
      121 trpapprwkm aisatlaiyp isvlgslflv phltslpvla sslvvacvfn vlmtyvsmpa
      181 vsrllrrwlt s
//
LOCUS       WP_258055138            1128 aa            linear   BCT 02-MAR-2025
DEFINITION  inverse autotransporter beta domain-containing protein [Escherichia
            coli].
ACCESSION   WP_258055138
VERSION     WP_258055138.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 1128)
  AUTHORS   Leo,J.C., Oberhettinger,P., Schutz,M. and Linke,D.
  TITLE     The inverse autotransporter family: intimin, invasin and related
            proteins
  JOURNAL   Int J Med Microbiol 305 (2), 276-282 (2015)
   PUBMED   25596886
REFERENCE   2  (residues 1 to 1128)
  AUTHORS   Fairman,J.W., Dautin,N., Wojtowicz,D., Liu,W., Noinaj,N.,
            Barnard,T.J., Udho,E., Przytycka,T.M., Cherezov,V. and
            Buchanan,S.K.
  TITLE     Crystal structures of the outer membrane domain of intimin and
            invasin from enterohemorrhagic E. coli and enteropathogenic Y.
            pseudotuberculosis
  JOURNAL   Structure 20 (7), 1233-1243 (2012)
   PUBMED   22658748
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023351.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11924.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..1128
                     /product="inverse autotransporter beta domain-containing
                     protein"
                     /calculated_mol_wt=121216
     Region          108..885
                     /region_name="Ve_IatC_Nterm"
                     /note="inverse autotransporter adhesin IatC N-terminal
                     domain; NF040978"
                     /db_xref="CDD:468908"
     Region          110..365
                     /region_name="IAT_beta"
                     /note="Inverse autotransporter, beta-domain; pfam11924"
                     /db_xref="CDD:432192"
     Region          868..924
                     /region_name="Big_1"
                     /note="Bacterial Ig-like domain (group 1); pfam02369"
                     /db_xref="CDD:460541"
ORIGIN      
        1 mstfilcpep gissffrrmt aqlrvffsrn nlsyysrwyt npagnlsvrv cmfrrggvwt
       61 pclyyrqgmh rnaytgwyqp lpreviclnr ftgrisrrrt whaacrmaeq latlrsgqaa
      121 davtqwlnqf gtaktqlsvd sdfslkgssl dvllpfyntp knvlftqlgm rdndgrfttn
      181 aglghryftd ngwmlgynvf ydvdwrntnr rygigveawr dylklsangy krlsdwrqsp
      241 tvtdyderpa dgwdiraegw lpawpqlggk lvyeqyygne valfgeserq knphaitagv
      301 twtpfpllta gvdyrrgkng addtrlnlsl tyrigeplah qldsskvgaq rslaanrlel
      361 vnrnndvvle yrkqtlitlq lppdvygael ttvtltpqvn akyglssigl ddaelrqagg
      421 kiirntgnqi tlqlpawssd rqsvtlsgra rdtrgnlsdi artrilvspa vqqqlavstd
      481 kttatadgad svrytltvtg sdgkpvsgqa vrwehnggtl ngenttnadg matatltsqt
      541 agiirvaatt rnqtakaadv tfvaamqgel ladrtqalad gqeavsytlt lkttdgkpls
      601 gknvtfttta gqlsrtqgtt dqngqlsvql tspragqavv nasvdgttis aapvtfenhl
      661 dsaivvnkts avadgqdsii ltavirdaag npvagqavtw htdngqftqq davtnaagaa
      721 satltstqag naqvslslng ttttvsaprv sftqqlyltl qagrstavad gndaitytln
      781 vrdaagqpvk dkavqwstdl gtlsaqqgtt saqgeatvtl astqagqavv natvdgkqis
      841 aqsvtftrtv rgvitveker vypgarqtvt ltltdaagnp vsgervdwha dsgnlwqtqg
      901 ttdaqgrttt twesttpgta titadaygqq ytapvitvmp altvssvtgi datgadgqnf
      961 gkrvpnstwp gakfridten aagtvtwtas spavsingnv mtvksnpagv tltgtdtdgq
     1021 tvtlnmgsnw faqsatesgf lnidvpgsai ntckalnagv ategqlsgii rewgelqkyp
     1081 gwtslasnwl yssttvilsn grtyyrafyl pqgtvselsg psgyyacr
//
LOCUS       WP_258055352             327 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258055352
VERSION     WP_258055352.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>327
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          1..>327
                     /region_name="ArpD"
                     /note="ABC-type protease/lipase transport system, ATPase
                     and permease components [Intracellular trafficking,
                     secretion, and vesicular transport]; COG4618"
                     /db_xref="CDD:443660"
ORIGIN      
        1 mklrpasprn eilatlgrfr palrsvalft avinllmlap slymlqvydr vlgsgnhmtl
       61 lmltlmvlgl ylllgalewv rslvvirlgg qldmqlnqri ydasfrasle rgeqavgqal
      121 ndltslrqfl tgnalfaffd apwfplyllv iflfspwlgl lalvgalllv llawvnesrs
      181 replaeagql silatqqasa nlrqaetlaa mgmlpamrar wfaqhqafla rqnlgsersa
      241 tigatskgvr lalqslvlgl gawlavegli tpgmmiagsi lmgrvlspid qliavwrqws
      301 garqayqrla rlleenppaa lgmplpa
//
LOCUS       WP_258055356             274 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258055356
VERSION     WP_258055356.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>274
                     /product="phosphopantetheine-binding protein"
     Region          <4..86
                     /region_name="AcpA"
                     /note="Acyl carrier protein/domain [Lipid transport and
                     metabolism, Secondary metabolites biosynthesis, transport
                     and catabolism]; COG3433"
                     /db_xref="CDD:442659"
     Region          104..>274
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mdlppdsrta lrdwlteqla dllgepladv raladdddll gcgldsirlm ylqerlrarg
       61 stldfaqlaq rpclgawldl lacadrlsap atvalptaqa rdqpfelssv qqaywlgrga
      121 gevlgnvsch aflefrtrdv dpqrlaaaae cvrqrhpmlr arffdgrqqi lptpplpcfd
      181 lqdwrtlqvd eaerdwqalr dwraheclav ergqvfllgl vrmpggedrl wlsldllaad
      241 veslrlllae lgvaylaper laeppalhfa dyla
//
LOCUS       WP_258055372             588 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258055372
VERSION     WP_258055372.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 588)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>588
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..169
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
     Region          157..574
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
     Site            order(293..294,298)
                     /site_type="active"
                     /db_xref="CDD:380459"
ORIGIN      
        1 learlpayml psriarverl pltaegkldr rallaalaae aaaqtleapa nateaallei
       61 wksvlkrpai gvsdnffqvg gdsirliqmq vmareaglaf tlrdvfnhqs irelarllaa
      121 paspadalgt sapqslepfa llsaaerkrl peglddaypm tslqqgmllq seasgdprll
      181 hnvvlhevhg rldgellara wailigrhai lrtgfdlhgg qvplqwvhpa tavaaevpvh
      241 dlcgldgetr rlrlrawiee eqatpfdwsr pplvrlaala lderrfalgv aehhsvldgw
      301 slqslvdell avyadllagv vareaeapav gfrdyvaler eaeanaasal fwldylagar
      361 yrplpglaee gprrmaavrv dvpadslsrl ralaersglp lrslllaahg ralcrfsdad
      421 evvtgfvshg rpeepgadrl lglflntlpc rlsasvdlld sarrafdyer aslehrrhpl
      481 aairrrnrel rldslfnfvd fhqddaapaa gvrhggildq vvvdvdvpla vdfevagerl
      541 evgfqyaagr fpaeraeala dayreallal ledpaqppta aqaedsve
//
LOCUS       WP_258055391             234 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphoenolpyruvate-utilizing N-terminal domain-containing protein,
            partial [Pseudomonas aeruginosa].
ACCESSION   WP_258055391
VERSION     WP_258055391.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017346.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05524.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>234
                     /product="phosphoenolpyruvate-utilizing N-terminal
                     domain-containing protein"
                     /GO_process="GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
     Region          3..>233
                     /region_name="PtsA"
                     /note="Phosphoenolpyruvate-protein kinase (PTS system EI
                     component in bacteria) [Carbohydrate transport and
                     metabolism]; COG1080"
                     /db_xref="CDD:440698"
ORIGIN      
        1 gtlagvcasp glasgplarl gaislpaddg rhrpeeqhla ldqalqrvrd dvqgslqqar
       61 lggdeneaai fsahlalled pglldaadml idqgvgaaha whraiqaqce ilqalgnlll
      121 aerandlrdl ekrvlrvllg dtaplrvpag aivaareitp sdlaplvdag aaglcmaegg
      181 atshvailar skglpclval gaglleleeg rqvvldagqg rlelspdarr leqv
//
LOCUS       WP_258055393             152 aa            linear   BCT 02-MAR-2025
DEFINITION  thioesterase domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258055393
VERSION     WP_258055393.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 152)
  AUTHORS   Schneider,A. and Marahiel,M.A.
  TITLE     Genetic evidence for a role of thioesterase domains, integrated in
            or associated with peptide synthetases, in non-ribosomal peptide
            biosynthesis in Bacillus subtilis
  JOURNAL   Arch Microbiol 169 (5), 404-410 (1998)
   PUBMED   9560421
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013166.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00975.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>152
                     /product="thioesterase domain-containing protein"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          7..>141
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 gegvprvlvh eglgtllpyr pllralgegr pllglavhds daylaipaeh lnaclgrrya
       61 ealhraglre vdllgycsgg lvaletaksl vqrgvrvrql divssyripy rvdderlllf
      121 sfaatlgldt aargcpaper hglarihise ps
//
LOCUS       WP_258055395             217 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2726 domain-containing protein [Escherichia coli].
ACCESSION   WP_258055395
VERSION     WP_258055395.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022337.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10881.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..217
                     /product="DUF2726 domain-containing protein"
                     /calculated_mol_wt=25278
     Region          58..167
                     /region_name="PDDEXK_nuclease-like"
                     /note="PDDEXK family nucleases; cl40440"
                     /db_xref="CDD:477358"
ORIGIN      
        1 mnliifivvv iiiavlsvri ifrrskncpp alirlhaagi rpgeaerilv sgeywqrqkt
       61 llterevsfm kglfrivdmk rwylcpqvrv adivqlngni rprsrqwwql frmvsqwhvd
      121 vviverrsfs ivaaveldda shlrperrrr dilleevlrq agipllrshd arkllqmtge
      181 wlnttgaaqq sadhewqwta twrsqasgrh gcrrstk
//
LOCUS       WP_258055403             223 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258055403
VERSION     WP_258055403.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 223)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>223
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          29..>216
                     /region_name="PRK07524"
                     /note="5-guanidino-2-oxopentanoate decarboxylase"
                     /db_xref="CDD:236041"
ORIGIN      
        1 mgaralrrer rlrwspnwtr ilpmqpqktl tagqalvrll anygvdtvfg ipgvhtlely
       61 rglpgsgirh vltrheqgag fmadgyarvs gkpgvcfvit gpgvtnvata igqayadsvp
      121 llvissvnhs aslgkgwgcl hetqdqramt apitafsala lspeqlpeli arayavfdse
      181 rprpvhisip ldvlaapvah dwsaavarrp grgvpctcll yts
//
LOCUS       WP_258055408             263 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY-family carbohydrate kinase, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258055408
VERSION     WP_258055408.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 263)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 263)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02782.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..263
                     /product="FGGY-family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <1..214
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 laphtrvacg ggdnmlaaig tgnirpgllt aslgtsgtls ayaerplvsp hgelatfcas
       61 sggwlplact mnltgacglv qdllhldlde fsrlaaqapv gaegllmlpf fdgervpalp
      121 hasaslhgmt aanlsranlc ravlegtafg lrygldllra sglpgeeirl vggaaknplw
      181 rrtladllgl plvcprqtea aalgaalqaa wslgresgag eslealcrrc valdestrtq
      241 pqarqqaaye qayrrylehl ppr
//
LOCUS       WP_258055424             166 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-binding domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258055424
VERSION     WP_258055424.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015411.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03446.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>166
                     /product="NAD(P)-binding domain-containing protein"
                     /GO_function="GO:0050661 - NADP binding [Evidence IEA]"
     Region          6..>105
                     /region_name="garR"
                     /note="tartronate semialdehyde reductase; Provisional;
                     cl42929"
                     /db_xref="CDD:456274"
     Region          <119..>166
                     /region_name="FMN_red"
                     /note="NADPH-dependent FMN reductase; cl00438"
                     /db_xref="CDD:469770"
ORIGIN      
        1 mtdiaflglg nmggpmaanl lkaghrvnvf dlqpkavlsl veqgaqgads alqccegaev
       61 vismlpagqh veslylgddg llarvagkpl lidcstiape tarkvaeaaa akgllalvpd
      121 rarehqgvlp fatggssahm ravdyalkpv laalkaqevl hgvfav
//
LOCUS       WP_258055510              84 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: phosphopantetheine-binding protein [unclassified
            Streptomyces].
ACCESSION   WP_258055510
VERSION     WP_258055510.1
KEYWORDS    RefSeq.
SOURCE      unclassified Streptomyces
  ORGANISM  unclassified Streptomyces
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="unclassified Streptomyces"
                     /db_xref="taxon:2593676"
     Protein         1..84
                     /product="phosphopantetheine-binding protein"
                     /calculated_mol_wt=9059
ORIGIN      
        1 medqflidfd rdvaadtdlf kagvidsfgy iqlmafigde fgfevaaedm lmnvlvslea
       61 ieefvagrta elaaarqgdv tcae
//
LOCUS       WP_258055562             461 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Streptomyces sp. Ru62].
ACCESSION   WP_258055562
VERSION     WP_258055562.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru62
  ORGANISM  Streptomyces sp. Ru62
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 461)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 461)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 461)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 461)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Streptomyces sp. Ru62"
                     /db_xref="taxon:2080745"
     Protein         1..461
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=49303
     Region          61..446
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mtpsrrikgl snrqspraag plsrrrfala lpsallasgc aaphrgtgrp gdpivltvls
       61 hyasgelkea lrgpvdewna thdrvkvrtk aveftdlltt fmvrqaagqg adilhpyclw
      121 ngqlvragvl rpapaehaee irrgysaaav gaasvggrvy gyptelqtya lyynkrllra
      181 agldgpprtw releetayrt trrdrygntl vqgfglstyd dsttvgqtla llnaaggtfv
      241 sadgrstaid spagravfdl ehrlvaegas spgvnvyraf psgqvamvis agwwtgslkt
      301 lmgtdyrdvg vapvplpeag geratlctgf mlgvntasah preaweflrw lnaertgrgk
      361 gaaatrmsal qvsvgsltgr addmrtllga gggkggggdp nlrpfldala yavpepnvpg
      421 aqraksllrk niealwtgrr sveealrvtr rqvdqevars w
//
LOCUS       WP_258055605             639 aa            linear   BCT 02-MAR-2025
DEFINITION  lamin tail domain-containing protein [Streptomyces sp. Ru62].
ACCESSION   WP_258055605
VERSION     WP_258055605.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru62
  ORGANISM  Streptomyces sp. Ru62
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 639)
  AUTHORS   Mans,B.J., Anantharaman,V., Aravind,L. and Koonin,E.V.
  TITLE     Comparative genomics, evolution and origins of the nuclear envelope
            and nuclear pore complex
  JOURNAL   Cell Cycle 3 (12), 1612-1637 (2004)
   PUBMED   15611647
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013125.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00932.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Streptomyces sp. Ru62"
                     /db_xref="taxon:2080745"
     Protein         1..639
                     /product="lamin tail domain-containing protein"
                     /calculated_mol_wt=65311
     Region          27..110
                     /region_name="LTD"
                     /note="Lamin Tail Domain; pfam00932"
                     /db_xref="CDD:460003"
     Region          152..244
                     /region_name="LTD"
                     /note="Lamin Tail Domain; pfam00932"
                     /db_xref="CDD:460003"
     Region          305..>478
                     /region_name="YjiK"
                     /note="Uncharacterized Ca-binding beta-propeller protein
                     YjiK [General function prediction only]; COG3204"
                     /db_xref="CDD:442437"
ORIGIN      
        1 mtftglvatg llaaqpaaaa dpagyqnvri nevtssnndt velynsgsta vslsgwkmsd
       61 dsfspqsftp sattitaggf vtfnspkglg dsdklviyta ggavvdrvew atdkakpama
      121 rcggdgtgaw vtataattfg aanasgcpss ipsvsqvrin evtsdgsdtv elynggtsav
      181 sigswkyvdn dtshspvsvs ssspsassip argyitfnsg lglgdndslf lldgngttvd
      241 svtwatdgak psderctngt gwfrtsttat lgsansctgg gsgggqtghl lggggsltsg
      301 ctpeapsgts stppgtpawp ggldvtitdn vcafttstgp egrdvsglaf dpanpsvlwa
      361 aknknwlykl vksngkwvpd pswsatgkqi rfaggsgqpd segvtvggng hiyvtserdn
      421 adntvpkdtv mefdpaatgs tltpvhqwdm tsqfpqldtg skddanlgfe gvgyvpdswl
      481 tangwvdplt gaaynpanyp lhgsglyfag lewdgtlhvy glnsdgtftt fgtvstgkas
      541 vidvmfdagt qrivatcdnt cgethtfmkv nasgtivpdv tytnpavmpv dnlegfaiap
      601 astcvngfre avwsddgvyg fgsgsssygh alysgtfpc
//
LOCUS       WP_258055734             187 aa            linear   BCT 02-MAR-2025
DEFINITION  alcohol dehydrogenase catalytic domain-containing protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258055734
VERSION     WP_258055734.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 187)
  AUTHORS   Taneja,B. and Mande,S.C.
  TITLE     Conserved structural features and sequence patterns in the GroES
            fold family
  JOURNAL   Protein Eng 12 (10), 815-818 (1999)
   PUBMED   10556240
REFERENCE   2  (residues 1 to 187)
  AUTHORS   Murzin,A.G.
  TITLE     Structural classification of proteins: new superfamilies
  JOURNAL   Curr Opin Struct Biol 6 (3), 386-394 (1996)
   PUBMED   8804825
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08240.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>187
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
     Region          1..>166
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
ORIGIN      
        1 mkalrwhaar dlrlselerq aprpgevele vaycgicgsd lheyqsgphs ipqaeahpls
       61 gcrapltlgh efcgvvaalg pgveglrigd rvavepeyrc gecrycregr ynlcesmgfi
      121 glmgdggfae rarvpaymlh rlpdavgfrq aavlepaava lhalrrrspv syphlrahet
      181 lrsgvgr
//
LOCUS       WP_258055738             239 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6308 family protein [Streptomyces sp. Ru62].
ACCESSION   WP_258055738
VERSION     WP_258055738.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru62
  ORGANISM  Streptomyces sp. Ru62
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 239)
  AUTHORS   Wehmeier,U.F. and Piepersberg,W.
  TITLE     Enzymology of aminoglycoside biosynthesis-deduction from gene
            clusters
  JOURNAL   Methods Enzymol 459, 459-491 (2009)
   PUBMED   19362651
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039405.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19827.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Streptomyces sp. Ru62"
                     /db_xref="taxon:2080745"
     Protein         1..239
                     /product="DUF6308 family protein"
                     /calculated_mol_wt=26398
     Region          32..232
                     /region_name="DUF6308"
                     /note="Family of unknown function (DUF6308); pfam19827"
                     /db_xref="CDD:437659"
ORIGIN      
        1 msiallerrc cranrrgcgg yvrtigalrg caekhlqtyt dprgprafrt ydwqgdperl
       61 spldclapal lsvrmgykqv vplfhpdgpg aevlqameav ladktcktad fldvtldpst
      121 gpwslvdral vatgesggtg lpdfkavavt kilhrkrpnl vpifdssiyq fylgqkpapg
      181 aykdtprrlw pllqadlrrh rdwiqdlivp irtpderpls llraadiivw ehtasgcaa
//
LOCUS       WP_258055875             313 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258055875
VERSION     WP_258055875.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>313
                     /product="DUF6531 domain-containing protein"
     Region          146..207
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
ORIGIN      
        1 mrtkaillaq grllsvaclm fmlsfargan aelyqwkitf gsrpyaffss yaaacqsyfd
       61 twspeyrktm nrvndrwvqc ivhigvnsys tdavligdsc plgaelnset gscdcrpgye
      121 mddagcklpd kngpdkgapp pegcagnpvn itngnkyqve hdlitpipls rhyngldglw
      181 rhsfsaritr kddsyllyre dgkvseftga grdltsltdl gklsrlagrf fytselneii
      241 efdpygklar lttkegrkyr vergasltis dehgnklvls egtnhqllra qtggisieyt
      301 ydkeqrltsv trt
//
LOCUS       WP_258055895             247 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein [Streptomyces sp. Ru62].
ACCESSION   WP_258055895
VERSION     WP_258055895.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru62
  ORGANISM  Streptomyces sp. Ru62
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Streptomyces sp. Ru62"
                     /db_xref="taxon:2080745"
     Protein         1..247
                     /product="DUF6531 domain-containing protein"
                     /calculated_mol_wt=26248
     Region          56..128
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
ORIGIN      
        1 mifggalgag ggllkasmeg gladttplll rppslrpdlv elgpaarnae rtpcvgepid
       61 vatgamlmtq tdlalpgslp feftrthlss yrggvcfgpt wistldeclq idgegvvfaa
      121 adgmrlvypv pqpgvptmpa kgprrplewd gkpdgamtvt dpstgvtrtf aapvpspsfg
      181 vfhlaldsws drngnridve rdddgipfgi rhsggyyvav dtqrprital rlldeppsrc
      241 rpsperw
//
LOCUS       WP_258055904             756 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258055904
VERSION     WP_258055904.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..756
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
     Region          36..752
                     /region_name="PRK04841"
                     /note="HTH-type transcriptional regulator MalT"
                     /db_xref="CDD:235315"
ORIGIN      
        1 aldpatfrrr lagalglped sdeaqlcrrl rnasalwlll ddyprhpdpa ldacldrlls
       61 aasprvgwwl asrrrpqcnl arlllegell evdggllafd adevaellrl hgrsadaata
      121 gtllersggw caalrlrllv geetagpllq eylqhellde lpppladaar alawlpqvgp
      181 elfrrlfeel phglddllar gfplladtnq ryslppaire awreapqrpq rdfhreacew
      241 faehgetrea vdqalaadep etaagllqkl teeqllhghn igmvlalrde lpaallastp
      301 rlvilnawtl lyagrlaeae dcigqlarfl pmpsasrqrv llaqwqglfg illhcrgerg
      361 aadylreale qlpedawsqg licrsalmql amiegrmdqa rligrdalrl arehdslife
      421 alieleraqw leqrgellra egvldraqry ledlgqqgsp mlgrialrra rlclqqgrev
      481 eaghwyrlgl eqarenldpw alygylglal leagqgdlda afnrllever lmqqrhvpdp
      541 lyrgalllvs saltlqqgrp aqareillrv rayfqpgrar lsppsepele arvehqlala
      601 elysgeaaaa earlrgllai leaqgrqtll cevrmgiaec qflsgqlpqa qqtlrsglel
      661 aerlglqlpq rrlrdrqpql faalpgeeee glsplscrel avlgliaqgc snqeigeqlf
      721 islhtvktha rringklgva rrtqavarak alglla
//
LOCUS       WP_258055915             994 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Streptomyces sp. Ru62].
ACCESSION   WP_258055915
VERSION     WP_258055915.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru62
  ORGANISM  Streptomyces sp. Ru62
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13191.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..994
                     /organism="Streptomyces sp. Ru62"
                     /db_xref="taxon:2080745"
     Protein         1..994
                     /product="AAA family ATPase"
                     /calculated_mol_wt=106742
     Region          2..966
                     /region_name="COG3899"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443106"
ORIGIN      
        1 mvplptgtad pgpgresvav rrrvgrpaag pggrtadglr lvmgcddalt gseltrsalt
       61 egtaaqerer dlagpgperp igreaetdri lrlldacgdq prallivgea gtgkthllra
      121 agkaagsrtr vlsaqgwepe stqrfaslhq lllpvldeld tlppshrtal gpvlgpgegg
      181 vppdgaalrl avlalvdrla qegrvllavd diqdcdrdsm nvllfvtrrl tnpavtalft
      241 argqvpppwv pgdlpvlplg elppgasarl ldaqpgaptg rarlellrra egnpsaivel
      301 cragssarre pgeaarvqqm fgprmsalph atqrallyaa taspyedltt vmaavgehdl
      361 rvwtpaesag litiaggrlt frnplvrmaa llthsvrlrq rahrelaals ghslhrarhl
      421 aaaavgtdes vamaleeaav pgpravscfd aaraleeaad ltpagedrar rlakalfaas
      481 fvgepewvrd lyarftredh dpelrcaavc amsgalsals lqreafdlll gvwqdtppad
      541 patahamaav amgiaaqsgl pehraqlprl fdlagrtare rgrrtrddwf vaefaqsdal
      601 asletlarag velssgtagp phepaalrpg sssgllglvt aalrahhvde sdvcaelgrq
      661 aleplrsrga vgllawilpg qvesllnlgr waeagrliee ggahaavhrl trlgldleal
      721 gailralrge svpeqefpgs gwaavslden ratqarmlra cgltamtlgd aegayrhlrs
      781 lftddcapld pflsprcvae favaaqhvgr qheaarvlee vrrglgprpt trmrllmhha
      841 aalvaedtha erhfrlatdd regdrwpler ararlhyaiw lrrrrrprea rvqltivvev
      901 atrlgarhla mvargelrat gvprraavss pltlseltsq eqrivrlaar glsnreiger
      961 mflsprtvst hlykvypklg isrrhqlrdl vpsd
//
LOCUS       WP_258055646             343 aa            linear   BCT 02-MAR-2025
DEFINITION  T3SS effector HopA1 family protein [Streptomyces sp. Ru62].
ACCESSION   WP_258055646
VERSION     WP_258055646.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru62
  ORGANISM  Streptomyces sp. Ru62
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 343)
  AUTHORS   Park,Y., Shin,I. and Rhee,S.
  TITLE     Crystal structure of the effector protein HopA1 from Pseudomonas
            syringae
  JOURNAL   J Struct Biol 189 (3), 276-280 (2015)
   PUBMED   25681297
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037672.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17914.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Streptomyces sp. Ru62"
                     /db_xref="taxon:2080745"
     Protein         1..343
                     /product="T3SS effector HopA1 family protein"
                     /calculated_mol_wt=35910
     Region          164..339
                     /region_name="HopA1"
                     /note="HopA1 effector protein family; pfam17914"
                     /db_xref="CDD:436136"
ORIGIN      
        1 mtddvrlset phgvpldtea esgggrmagd trlpealsaa lrdvrvdata teaelagrrv
       61 taedarqltg aladalyasl haglpessap sqrlrdprle ealarevpht tfpsdaelvg
      121 srapgsgagg rvvvrtggva vavpgawltg paedgrpvrl awpaahpavs pgfffvtgsq
      181 gpppreqpll rvylhvrdad aapalfgrvl raleaggrpy rakaasvphq yprydavvvy
      241 laaedralld lvarevaghp algeetslfa rrhapgvasa aepgdtrpgm rgmsfgqhrs
      301 hvmaqalveh attgrgtsld vllarrlaea ridpsdparn lta
//
LOCUS       WP_258055956             118 aa            linear   BCT 02-MAR-2025
DEFINITION  M48 family metalloprotease, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258055956
VERSION     WP_258055956.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 118)
  AUTHORS   Quigley,A., Dong,Y.Y., Pike,A.C., Dong,L., Shrestha,L.,
            Berridge,G., Stansfeld,P.J., Sansom,M.S., Edwards,A.M., Bountra,C.,
            von Delft,F., Bullock,A.N., Burgess-Brown,N.A. and Carpenter,E.P.
  TITLE     The structural basis of ZMPSTE24-dependent laminopathies
  JOURNAL   Science 339 (6127), 1604-1607 (2013)
   PUBMED   23539603
REFERENCE   2  (residues 1 to 118)
  AUTHORS   Pryor,E.E. Jr., Horanyi,P.S., Clark,K.M., Fedoriw,N.,
            Connelly,S.M., Koszelak-Rosenblum,M., Zhu,G., Malkowski,M.G.,
            Wiener,M.C. and Dumont,M.E.
  TITLE     Structure of the integral membrane protein CAAX protease Ste24p
  JOURNAL   Science 339 (6127), 1600-1604 (2013)
   PUBMED   23539602
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013594.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01435.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..118
                     /product="M48 family metalloprotease"
                     /EC_number="3.4.24.-"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          <32..112
                     /region_name="Peptidase_M48_M56"
                     /note="Peptidases M48 (Ste24 endopeptidase or htpX
                     homolog) and M56 (in MecR1 and BlaR1), integral membrane
                     metallopeptidases; cl28898"
                     /db_xref="CDD:333718"
ORIGIN      
        1 arvkhrapre etiakphglr gaiqlkvhnq laaalsgsql gelteslina qfsqsqesda
       61 ddfsyellkk rgvntqglvt afeklaklgg gdssmfdshp gsqaradhir qriaadrk
//
LOCUS       WP_258055968             229 aa            linear   BCT 02-MAR-2025
DEFINITION  MATE family efflux transporter, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258055968
VERSION     WP_258055968.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01554.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..229
                     /product="MATE family efflux transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <4..212
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 raqwqrlrhw lswlpllmvn rdifirslal qlvfflltvq gtrlgdatva analllngll
       61 ltsyaldgla havealcgha igardrtalr ralvvaggws llaslafaal falfghlfid
      121 lqsdiagvre vayaylpyla clpllgmwsy lldglfigat raremrnaml vavaaslplg
      181 wllqglgnhg lwlaflafml lrglvlaayg wrltrrdgwf aaqgadsgr
//
LOCUS       WP_258055979             164 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258055979
VERSION     WP_258055979.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 164)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..164
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <1..164
                     /region_name="PRK07524"
                     /note="5-guanidino-2-oxopentanoate decarboxylase"
                     /db_xref="CDD:236041"
ORIGIN      
        1 alpadafvst dmtqlaytgn yaypsraprs wlhptgygtl gyglpagiga klgapqrpgl
       61 vlvgdggfly taqelatase eldsplvvll wnndalgqir ddmlgldiep vgvlprnpdf
      121 allgraygca vrqpqdldel erdlragfgq pgvtlielrh acar
//
LOCUS       WP_258055983             155 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258055983
VERSION     WP_258055983.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 155)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>155
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
     Region          1..>149
                     /region_name="PRK00742"
                     /note="chemotaxis-specific protein-glutamate
                     methyltransferase CheB"
                     /db_xref="CDD:234828"
ORIGIN      
        1 mpisvlvvdd salirsllke iiqadpelrl vgcapdafva rdlikqhapd visldvempr
       61 mdgltfldkl mkarptpvlm issltergse atlralelga vdfiakprlg iaegmqayae
      121 eiraklktva rhahqcpgrr rfrpdpqpaq gdhpg
//
LOCUS       WP_258055998             172 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258055998
VERSION     WP_258055998.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 172)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 172)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 172)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>172
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          5..>121
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            38..45
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213222"
     Site            87..90
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213222"
ORIGIN      
        1 msalitltnl gfawpgqael ldipsfhler geslflkgps gsgkttllgl lggvqkpgrg
       61 sirllgedle klsaarrdhf rvdhtgyifq qfnllpflsv renvelpchf salrrqrare
      121 rhgspaqaas hllgqlglgg elhdrraarr svslihlggc rrggvcgwrg ag
//
LOCUS       WP_258055996             635 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258055996
VERSION     WP_258055996.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 635)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>635
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..144
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
     Region          132..549
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
     Site            order(268..269,273)
                     /site_type="active"
                     /db_xref="CDD:380459"
     Region          565..623
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; pfam00550"
                     /db_xref="CDD:425746"
ORIGIN      
        1 gkldrralla alaaeaaaqp leapanatea alleiwksvl krpaigvsdn ffqvggdsir
       61 liqmqvmarq aglaftlrdv fnhqsirela rllaapaspa dalgtsapqt lepfallsaa
      121 erkrlpegld daypmtslqq gmllqseasg dprllhnvvl hevhgrldge llarawaili
      181 grhailrtgf dlhggqaplq wvhpatavaa evpvhdlrgl deearrlrlr awieeeqatp
      241 fdwsrpplvr laalalderr falgvaehhs vldgwslqsl vdellavyad llagvvarea
      301 eapavgfrdy valereaean agsalfwldy lagaryrplp glaeegprrm aavrvdvpaa
      361 slprlralae rsglplrsll laahgralcr fsdadevvsg fvshgrpeep gadrllglfl
      421 ntlpcrlsas vdlldsarra fdyerasleh rrhplaairr rnrelrldsl fnfvdfhqdd
      481 aapaagvrhg gildqvvvdv dvplavdfev agerlevgfq yaagrfpaer aealagayre
      541 allalledpa qppaavqaed svelrrvlkv lsrvlgrpla adqgfasagg hsllgvqaia
      601 elrrltgrql slgllqgdpd arevvrrcha adapp
//
LOCUS       WP_258056007             121 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6479 family protein [Streptomyces sp. Ru62].
ACCESSION   WP_258056007
VERSION     WP_258056007.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru62
  ORGANISM  Streptomyces sp. Ru62
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039795.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20087.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Streptomyces sp. Ru62"
                     /db_xref="taxon:2080745"
     Protein         1..121
                     /product="DUF6479 family protein"
                     /calculated_mol_wt=13113
     Region          1..105
                     /region_name="DUF6479"
                     /note="Family of unknown function (DUF6479); pfam20087"
                     /db_xref="CDD:466286"
ORIGIN      
        1 mntasmqlaa asglmslflf ivavavlall aggfwmtsrv ryresprprp eeqpklppeg
       61 pvhevrenre saevpripkg drpltpyelt nmdtrtnpsk erprwskgss gsfgggglga
      121 h
//
LOCUS       WP_258056048             170 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258056048
VERSION     WP_258056048.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 170)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>170
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          9..>165
                     /region_name="COG4908"
                     /note="Uncharacterized conserved protein, contains a NRPS
                     condensation (elongation) domain [General function
                     prediction only]"
                     /db_xref="CDD:443936"
ORIGIN      
        1 mmaeirrpls averwywlsd qfsalnvisr vrvhgqlsid dlrrgldalq arhpllrari
       61 ehdagfdprw vpcerpiplr evrgggeeqw lreinerelp eridpdsgpl irtvaittda
      121 gahdllvvvp hiiadgttvl tlaeqwlala adpaaqpwta salppaedlr
//
LOCUS       WP_258056097             180 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6882 domain-containing protein [Streptomyces sp. Ru62].
ACCESSION   WP_258056097
VERSION     WP_258056097.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru62
  ORGANISM  Streptomyces sp. Ru62
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF044878.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21813.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Streptomyces sp. Ru62"
                     /db_xref="taxon:2080745"
     Protein         1..180
                     /product="DUF6882 domain-containing protein"
                     /calculated_mol_wt=19218
ORIGIN      
        1 mglfkrggkp egapqgpdpe glstlllqge dmidqlarah mswglgsadr wgldqrtgvi
       61 twtfpdktat apaqilssws psssswrwaw anesilpems rdartvrdwg eahghaalve
      121 peveadeqta gtlaalavri tkatgfyrgp garsiaiitf gpvtltaqdg ststfkinie
//
LOCUS       WP_258056126             517 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent monooxygenase [Streptomyces sp. Ru62].
ACCESSION   WP_258056126
VERSION     WP_258056126.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru62
  ORGANISM  Streptomyces sp. Ru62
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (residues 1 to 517)
  AUTHORS   Schreuder,H.A., van der Laan,J.M., Swarte,M.B., Kalk,K.H., Hol,W.G.
            and Drenth,J.
  TITLE     Crystal structure of the reduced form of p-hydroxybenzoate
            hydroxylase refined at 2.3 A resolution
  JOURNAL   Proteins 14 (2), 178-190 (1992)
   PUBMED   1409567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01494.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Streptomyces sp. Ru62"
                     /db_xref="taxon:2080745"
     Protein         1..517
                     /product="FAD-dependent monooxygenase"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /calculated_mol_wt=56037
     Region          26..506
                     /region_name="PRK08244"
                     /note="monooxygenase"
                     /db_xref="CDD:236199"
ORIGIN      
        1 madgsqvitv vitrsvtrgg qdmgsdvevl vvgagpagll lagdlaeagv rctvverreg
       61 esqltrafav hartmeqlda rgladdlllt glrnpilqfl ridlshlptr yphvlvtpqy
      121 nterlllsra lthgvnimra hevtgvqqdp sgvdvtvktp agtehrlrad yvvgadgrns
      181 cvrqslglpf pgrsavrsmm ladvrmadpp kkpptvaatg dafaivvpfg dgwfrvmawn
      241 rhhpmpdnas vdleeikdva rqalgsdfgm hdprwlsrfh sderqspryr vgrvflvgda
      301 ahvhspaggm glntsiqdsa nlswklaavq rgrapdtlld syqnerhpvg rrvlrmsgal
      361 lrgvlttpra lcglrdlsar tvlqtppvar rlamaisgid isyaaavgah plvgkrapdv
      421 plsdgrrlye alrkrrfvlv tpsdterfps litewageve ivsprgttkk svlvrpdayi
      481 awaisdespe hridaarkal tewcgtqgss saapspd
//
LOCUS       WP_258056156             377 aa            linear   BCT 02-MAR-2025
DEFINITION  isocitrate/isopropylmalate family dehydrogenase [Streptomyces sp.
            Ru62].
ACCESSION   WP_258056156
VERSION     WP_258056156.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces sp. Ru62
  ORGANISM  Streptomyces sp. Ru62
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012407.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00180.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Streptomyces sp. Ru62"
                     /db_xref="taxon:2080745"
     Protein         1..377
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /GO_function="GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /calculated_mol_wt=41546
     Region          <133..349
                     /region_name="Iso_dh"
                     /note="Isocitrate/isopropylmalate dehydrogenase; cl00445"
                     /db_xref="CDD:444908"
     Region          <283..359
                     /region_name="LeuB"
                     /note="Isocitrate/isopropylmalate dehydrogenase [Energy
                     production and conversion, Amino acid transport and
                     metabolism]; COG0473"
                     /db_xref="CDD:440241"
ORIGIN      
        1 mirphiavpa delrtrkpvi glavgrgtgp evadvfervl galtarhphg vtiersprly
       61 hsyvslraer dvariralta edadhyerfc rtraeqgtea vfrtainaqs lylvrqrlra
      121 vkvdlltdar rslllvrdqa qgfytgenrh tpgevtrtmt fsrditeavv shalrrarre
      181 wpdghldriv maykfhlldg aldawvadla drlgirvdlf qpdtvnrnll thglpdrtli
      241 vagnewadim hvmlldrfgs drqenrcten vcldpglsgl veyqtvhgsa ddlagrdlvn
      301 pvatiraaal vaerhagcpg avrateralr mldergvrtp dlggrhstta vvdtlldcld
      361 vpgadgtprd aalvggp
//
LOCUS       WP_258056170             149 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258056170
VERSION     WP_258056170.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 149)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 149)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>149
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          10..>149
                     /region_name="VI_Rhs_Vgr"
                     /note="type VI secretion system Vgr family protein;
                     TIGR03361"
                     /db_xref="CDD:274542"
ORIGIN      
        1 mfnpanqthf slsldglrhd lqvlefsghe gisrpyrfel elvgeragld leaflhrpaf
       61 laftpqgqgv hglvygaaqa dagkrltryr ltlvpqlayl aqrsnqrifq hltvpqival
      121 ileehgilad ayrfqlgtry pereycvqy
//
LOCUS       WP_258056308             188 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258056308
VERSION     WP_258056308.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 188)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..188
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <1..183
                     /region_name="PRK07092"
                     /note="benzoylformate decarboxylase; Reviewed"
                     /db_xref="CDD:235931"
ORIGIN      
        1 prppalaeeg gplrpetvfd vidalaprda ifvkeststv tafwqrvemr epgsyffpaa
       61 gglgfglpaa vgaqlaqprr qvigiigdgs anygitalws aaqyrvpavf iilkngtyga
      121 lrwfagvlev pdapgldvpg ldfcaiargy gvealhaatr eelesalkha laadrpvlie
      181 vptqtiep
//
LOCUS       WP_258056319             132 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258056319
VERSION     WP_258056319.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 132)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>132
                     /product="PfkB family carbohydrate kinase"
     Region          4..>132
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
ORIGIN      
        1 mariltitln paldltvrlr qlelgavnrs eavltqaagk glnvaqvlad lghrltvsgf
       61 lgednqppft amfqrrgfad afvrvpgetr sniklaergg rvsdlngpgp eaderaqaal
      121 lerldrlage he
//
LOCUS       WP_258056342             329 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258056342
VERSION     WP_258056342.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>329
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          4..>329
                     /region_name="ArpD"
                     /note="ABC-type protease/lipase transport system, ATPase
                     and permease components [Intracellular trafficking,
                     secretion, and vesicular transport]; COG4618"
                     /db_xref="CDD:443660"
ORIGIN      
        1 mklrpasprn eilatlgrfr palrsvalft avinllmlap slymlqvydr vlgsgnhmtl
       61 lmltlmvlgl ylllgalewv rslvvirlgg qldmqlnqri ydasfrasle rgeqaagqal
      121 ndltslrqfl tgnalfaffd apwfplyllv iflfspwlgl lalagalllv llawvnesrs
      181 replaeagql silatqqasa nlrqaetlaa mgmlpamrar wfaqhqafla rqnlgsersa
      241 aigatskgvr lalqslvlgl gawlavegli tpgmmiagsi lmgrvlspid qliavwrqws
      301 garqayqrla rlleenppaa lgmplpapr
//
LOCUS       WP_258056352             328 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258056352
VERSION     WP_258056352.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..328
                     /product="phosphopantetheine-binding protein"
     Region          <175..317
                     /region_name="entF"
                     /note="enterobactin non-ribosomal peptide synthetase EntF;
                     PRK10252"
                     /db_xref="CDD:236668"
ORIGIN      
        1 tsqrllearp tpaagerlrv avldtraglw ldqgmasllr pgleptlfer srvlldaaat
       61 rlperivvqa lddgllpaeh lgrydrvisf aalhayeasr eglalaaall rpqgrlllvd
      121 llcesplall gaallddrpl rlaelpslla dlaaaglapr clwrserial vealapglgl
      181 daaalqagle qrlpqamrpe rlwclpslpl ngngkvdrrr laesmtralg ecrhepsaee
      241 pleaheqala ecweavlkrp vrrreasffs lggdsllatr llagirerfg vrlgmadfyr
      301 qptlaglarh lqaqtveiee tqleegvl
//
LOCUS       WP_258056350             684 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258056350
VERSION     WP_258056350.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 684)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>684
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <2..122
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
     Region          164..581
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
     Site            order(300..301,305)
                     /site_type="active"
                     /db_xref="CDD:380459"
     Region          597..655
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; pfam00550"
                     /db_xref="CDD:425746"
ORIGIN      
        1 eqalrgflea rlpaymlpsr iarverlplt aegkldrral laalaaeaaa qpleapanat
       61 eaalldiwks vlkrpaigvs dnffqvggds irliqmqvma rqaglaftlr dvfnhqsire
      121 larllaapan padaaatsap ralepfalls aaerkrlpeg lddaypmtsl qqgmllqsea
      181 sgdprllhnv vlhevhgrld gellarawai ligrhailrt gfdlhggqap lqwvhpatav
      241 aaevpvqdlr gldeearrlr lrawieeeqa tpfdwsrppl vrlaalalde rrfalgvaeh
      301 hsvldgwslq slvdellavy adllagvvar eaeapavgfr dyvalereae anagsalfwl
      361 dylagaryrp lpglaeegpr rmaavrvdvp adslprlral aersglplrs lllaahgral
      421 crfsdadevv sgfvshgrpe epgadrllgl flntlpcrls asvdlldsar rafdyerasl
      481 ehrrhplaai rrrnrelrld slfnfvdfhq ddaapaagvr hgglldqvvv dvdvplavdf
      541 evagerlevg fqyaagrfpa eraealaday reallalled paqppaavqa edsvelrrvl
      601 kvlsrvlgrp laadqgfasa gghsllgvqa iaelrrltgr qlslgllqgd pdarevvrrc
      661 haadapplpp ateraralwl qrsg
//
LOCUS       WP_258056375            1911 aa            linear   BCT 02-MAR-2025
DEFINITION  MBG domain-containing protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258056375
VERSION     WP_258056375.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037085.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18676.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..1911
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>1911
                     /product="MBG domain-containing protein"
     Region          40..304
                     /region_name="TPS"
                     /note="TPS secretion domain; pfam05860"
                     /db_xref="CDD:461762"
     Region          241..1911
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          1073..1148
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          1154..1229
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          1315..1390
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          1476..1551
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          1637..1712
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          1798..1873
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
ORIGIN      
        1 mvrpdsqrgk rtsskagreg rfvlaasstl mfaiasinaa maaptgaqfn pneikisqqg
       61 kttlidqstq raiinwkgfd vsadeavrfn qpgvtsstln rvtagqesvi agrisapgqv
      121 iiynsngvvf sgsakvdvgs litttanisd ehfrqgklif dqpgnpdari vndgsisvae
      181 kglaafvaps vanngvinar lgtvamaagn aatidlygdg lvsiavtdpv trkpqdaqal
      241 vsnggaiqad ggsvlitaeq asrvvdnavn lsgvilargt evregsvalv sksgdiqiag
      301 kidvsgpkng gdvlvsgqqv alastasida rgtaqggsvr iggdfqgrge lpraknatla
      361 kgasidvsat gkgngglavv wsdgntrmdg rilarggaqg gngglvetsg kvnlsiadsa
      421 yvsvaapygn ggtwlldptt lrivasggts gsvggangas gdatvnasvv tgalaggkvt
      481 lsasdrlsve aplitsnlgg asrgleliat gpagavdisa pilfrngsla iraggninfl
      541 sggtpqtsgi vdlgsgtlwm qtstagkisq qagtaliaan lagragsidl aswdnyagnl
      601 alqtfngtlk yrqsnatgvt tsgtvfdpfi nqsmtgtaqn ivssvgtril eansvgttgn
      661 ytltadgnse fdrlvftalp yrrvsgsasf ptndssdylv tnlryqvngs nvtatpngga
      721 psgftvaagn gsvttwtgnw gtswgvkgfg gvigvtdelq ydvgtgltee lifglggkts
      781 rvdtrldlfm regafnsfae raqvemfktt ttagdilsrq qtatltanda trvygdvnpt
      841 ltatmsgina idayvnsqfn dlyqatastt atqasnvgqy aitgnangse yfsqryqlvr
      901 qdgrltvtpa qlivsadakt kvygdadptl tyqvsglkns dtaagvlsgn lgrvagenvg
      961 nygilqgglg lntanytlsy vgndlritpa qlnviadakt kvygdldpal tyqvsglkrg
     1021 dtagavlngg slsrvagenv gvyginqggl glvssnytln yqgnnltitk allnviadak
     1081 tkvygdadps ltyqvsglkn gdtagavlng gslsrvagen vgvyginqgg lglvsanydl
     1141 syqgnnltit kallnviada ktkvygdadp sltyqvsglk ngdtagavln ggglvrvsge
     1201 nvgnyaiqqg glglvsgnyd layqgnnlti tkallnviad aktkvygdad psltyqvsgl
     1261 kngdtagsil tgglnraage nvgvyginqg dlalnsgnyd lsyqgnnlti tkallnviad
     1321 aktkvygdad psltyqvsgl kngdtagavl nggglvrvsg envgnyaiqq gglglvsgny
     1381 dlayqgnnlt itkallnvia daktkvygda dpsltyqvsg lkngdsagsi ltgglnraag
     1441 envgvyginq gdlalnsgny dlsyqgnnlt itkallnvia daktkvygda dpaltyqvsg
     1501 lkngdtagav lnggslsrva genvgvygin qgglalnsgn ydlsyqgnnl titkallnvi
     1561 adgktkvygd adpsltyqvs glkngdsags iltgglnrva genvgvygin qgdlalnsgn
     1621 ydlsyqgnnl titkallnvi adaktkvygd adpsltyqvs glkngdtaga vlnggslsrv
     1681 agenvgvygi nqgglglvsg nydlayqgnn ltitkallnv iadgktkvyg dadpsltyqv
     1741 sglkngdsag siltgglnra aganvgvygi nqgdlalnsg nydlsyqgnn ltitkallnv
     1801 iadgktkvyg dadpsltyqv sglkngdtag avlnggslsr vagenvgvyg inqgglglvs
     1861 gnydlayqgn nltitkalln viadgktkvy gdadpsltyq vsglkngdsa g
//
LOCUS       WP_258056401             275 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphopantetheine-binding protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258056401
VERSION     WP_258056401.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012759.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00550.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>275
                     /product="phosphopantetheine-binding protein"
     Region          <4..86
                     /region_name="AcpA"
                     /note="Acyl carrier protein/domain [Lipid transport and
                     metabolism, Secondary metabolites biosynthesis, transport
                     and catabolism]; COG3433"
                     /db_xref="CDD:442659"
     Region          104..>275
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mdlppdsrta lrdwlteqla dllgepladv raladdddll gcgldsirlm ylqerlrarg
       61 stldfaqlaq rpclgawldl lacadrlsap atvalptaqa rdqpfelssv qqaywlgrga
      121 gevlgnvsch aflefrtrdv dpqrlaaaae cvrqrhpmlr arffdgrqqi lptpplpcfd
      181 lqdwrtlqvd eaerdwqalr dwraheclav ergqvfllgl vrmpggedrl wlsldllaad
      241 veslrlllae lgvaylaper laeppalhfa dylah
//
LOCUS       WP_258056415             284 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258056415
VERSION     WP_258056415.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 284)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>284
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          5..53
                     /region_name="TubC_N"
                     /note="TubC N-terminal docking domain; pfam18563"
                     /db_xref="CDD:436580"
     Region          69..>284
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mslgelletc rsrrielwse agrlryrapq galdaglaer lraerealle hleggpgwra
       61 epdlahqrfp ltpvqaayvl grqaafdygg nacqlyaeyd wpvdtdparl eaawnamver
      121 hpmlravied nawqrvlpev pwqrltvhac agldeaafqa hlervrerld hacaaldqwp
      181 vlrpelsigr dacvlhcsvd ftlvdyaslq lllgewrrry ldpqwtaepl eatfrdyvgv
      241 eqrrrqspaw qrdrdwwlar ldalpgrpdl plrvqpdtrs trfr
//
LOCUS       WP_258056427             309 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258056427
VERSION     WP_258056427.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 309)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>309
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..232
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
     Region          268..>309
                     /region_name="MenE/FadK"
                     /note="O-succinylbenzoic acid-CoA ligase MenE or related
                     acyl-CoA synthetase (AMP-forming) [Lipid transport and
                     metabolism]; COG0318"
                     /db_xref="CDD:440087"
ORIGIN      
        1 lerlprlpda palplacape sirqprtrrl afqlsagesr rlerlaaqhg vtlssvfgca
       61 falvlarwse saefllnvpl fdrhaddpri geviadfttl lllecrmqag vsfaeavksf
      121 qrnlhgaidh aafpalevlr earrqgqprs apvvfasnlg eegfvpaafr dafgdlhdml
      181 sqtpqvwldh qlyrvgdgil lawdsvvglf peglpetmfe ayvgllqrlc dsaweqpadl
      241 plpwaqqarr allngqpaca tartlhrdff lraaeapdad allyrdqrvt rgelaeralr
      301 iagglreag
//
LOCUS       WP_258056444             145 aa            linear   BCT 02-MAR-2025
DEFINITION  phospholipase D-like domain-containing protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258056444
VERSION     WP_258056444.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13091.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>145
                     /product="phospholipase D-like domain-containing protein"
     Region          <1..145
                     /region_name="pssA"
                     /note="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase; PRK09428"
                     /db_xref="CDD:236510"
ORIGIN      
        1 ctpyfnlpav lvrniiqllr dgkqveiivg dktandfyip edqpfkiiga lpylyeinlr
       61 rflsrlqyyv ntdqlivrlw kdddnsyhlk gmwvddewml ltgnnlnpra wrldlenail
      121 ihdpkrqlga mrekelklir thttv
//
LOCUS       WP_258056449             137 aa            linear   BCT 02-MAR-2025
DEFINITION  4Fe-4S dicluster domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258056449
VERSION     WP_258056449.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024247.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12838.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>137
                     /product="4Fe-4S dicluster domain-containing protein"
     Region          <1..>137
                     /region_name="PRK05035"
                     /note="electron transport complex protein RnfC;
                     Provisional; cl47132"
                     /db_xref="CDD:481472"
ORIGIN      
        1 mgepqeekgc ircsacadac padllpqqly wfskgqqhdk atahnladci ecgacawvcp
       61 sniplvqyfr qekaeiaair qeeqraaeak arfearqarl erekaaraer hkkaavqpaa
      121 kdqeaisaal arvrdkq
//
LOCUS       WP_258056453             131 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase family protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258056453
VERSION     WP_258056453.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 131)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00725.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>131
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
     Region          <1..131
                     /region_name="fadB"
                     /note="fatty acid oxidation complex subunit alpha FadB;
                     PRK11730"
                     /db_xref="CDD:183293"
ORIGIN      
        1 detiakvvaw askmgktpiv vndcpgffvn rvlfpyfagf sqllrdgadf rkidkvmekq
       61 fgwpmgpanl ldvvgidtah haqavmaagf pqrmqkdyrd aidalfdanr fgqknglgfw
      121 rykedskgkp k
//
LOCUS       WP_258056462            1288 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258056462
VERSION     WP_258056462.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..1288
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>1288
                     /product="Ig-like domain-containing protein"
     Region          20..72
                     /region_name="biofilm_BapA_N"
                     /note="BapA prefix-like domain; NF033677"
                     /db_xref="CDD:411274"
     Region          <161..606
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          <566..1016
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          <825..>1209
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          1242..>1288
                     /region_name="Big_6"
                     /note="Bacterial Ig domain; pfam17936"
                     /db_xref="CDD:465576"
ORIGIN      
        1 msiqakvtpi dqsissaaav evpengilkl sqssnvaldv apesvagysk sgsdlivqlk
       61 tgesvrianf yaegqpssql fladkdklva vdlppvaadg plmagyipqe slagfesltg
      121 agvlggmsag tallvgaaai gagvaisnss gggggggssv ppdttppkaa sglkiapdgs
      181 sisgqaeaga svgidtngdg kpdltviada ngnftaplnp pltngqtvtv vvtdpagnas
      241 ppaqvtapdt tapapatdvq vapdgssvtg kaepgstvgv dtdgdgqpdt tvvvgpggsf
      301 evplnppltn getvtvivtd pagnnstpvt veapdttapa patdvqvapd gssvtgnaep
      361 gatvgvdtdg dgqpdttvvv gpggsfevpl nppltngetv tvivtdpagn sstpvtaeap
      421 dfpdapqvna sngsvlsgta eagvtivitd gngnpigqts adangnwsft pgsqlpdgtv
      481 vnvvardaag nsspatsitv dgvapsapvv epsngselsg taepgssvtl tdgngnpigq
      541 ttadangnws ftpstplpdg tvvnvvarda agnssppasv tvdavapatp tvdpsngttl
      601 sgtaepgatv tltdgngnpi gqvtadgsgn wtftpstplp ngtvvnatat dpsgnasspa
      661 svtvdavapa tpvvnpsngt tlsgtaepga tvtltdgngn pigqvtadgs gnwsftpttp
      721 lpngtvvnat atdasgntsa gssvtvdsva patpvinpsn gttlsgtaep gssvtltdgn
      781 gnpigqvtad gsgnwsftps tpladgtvvn atatdpagnt ggqgsttvda iapttptvnl
      841 sngsslsgta epgstviltd gngnpiaevt adgsgnwtyt pstpiangtv vnvvaqdaag
      901 nssppatvtv dssappapvi npsngvvisg taeagatvtl tdaggnpigq vtadgsgnws
      961 ftpgtplang tvivatatdp tgntgpqaat tvdavappap vidpsngtti sgtaeagakv
     1021 iltdgngnpi gettadgsgn wsftpgtpla ngtvvnavaq dpagntgpqg sttvdavapn
     1081 tpvvnpsngn llngtaepgs tvtltdgngn pigqttadgs gnwsftpgsq lpngtvvnvt
     1141 asdaagntsl patttvdssl psipqvdpsn gsvisgtada gntiiitdgn gnpigqvtad
     1201 gsgnwsftpg iplpdgtvvn vvarspsnvd sapavitvdg vapaapvidp sngteisgta
     1261 eagatviltd gggnpigqat adgsgnwt
//
LOCUS       WP_258056468             249 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258056468
VERSION     WP_258056468.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 249)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 249)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>249
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          10..>230
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mtpegrmhgl flgidcgtqg skallldags grtlglgsaa qrppegrdgr reqdpadwle
       61 amasavrmal eeaavdgrev ralavsaqqh glllldaegr alrpaklwcd tesaaenrel
      121 lealggpags lerlglvlap gytlskllws rrrfpelfar vahillphdy lnhwltgrvc
      181 seagdasgsg yfdvrrrtwa sdvlelvepg grlaaalpel iepgacignl lfllhipgpp
      241 gpylrsyag
//
LOCUS       WP_258056475             301 aa            linear   BCT 02-MAR-2025
DEFINITION  thioesterase domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258056475
VERSION     WP_258056475.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 301)
  AUTHORS   Schneider,A. and Marahiel,M.A.
  TITLE     Genetic evidence for a role of thioesterase domains, integrated in
            or associated with peptide synthetases, in non-ribosomal peptide
            biosynthesis in Bacillus subtilis
  JOURNAL   Arch Microbiol 169 (5), 404-410 (1998)
   PUBMED   9560421
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013166.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00975.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..301
                     /product="thioesterase domain-containing protein"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <4..291
                     /region_name="EntF2"
                     /note="Thioesterase domain of type I polyketide synthase
                     or non-ribosomal peptide synthetase [Secondary metabolites
                     biosynthesis, transport and catabolism]; COG3319"
                     /db_xref="CDD:442548"
ORIGIN      
        1 ypgrplaegg valdplvrlv pgegvprvlv heglgtllpy rpllralgeg rpllglavhd
       61 sdaylaipae hlnaclgrry aealhraglr evdllgycsg glvaletaks lvqrgvrvrq
      121 ldivssyrip yrvdderlll fsfaatlgld taalgfpape rlgqavqaal aqtperlvae
      181 alaglpglad lvalrgrvlq aasgsadaas verdtlyrlf chsvrasqaa apepyvgalr
      241 lfvpdagnpl vpryaealet qwraaalgac gihevpgghf dclgealaqs lskpmpeeas
      301 r
//
LOCUS       WP_258056486             239 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258056486
VERSION     WP_258056486.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 239)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>239
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          29..>239
                     /region_name="PRK07524"
                     /note="5-guanidino-2-oxopentanoate decarboxylase"
                     /db_xref="CDD:236041"
ORIGIN      
        1 mgaralrrer rlrwspnwtr ilpmqpqktl tagqalvrll anygvdtvfg ipgvhtlely
       61 rglpgsgirh vltrheqgag fmadgyarvs gkpgvcfvit gpgvtnvata igqayadsvp
      121 llvissvnhs aslgkgwgcl hetqdqramt apitafsala lspeqlpeli arayavfdse
      181 rprpvhisip ldvlaapvah dwsaavarrp grgvpcteal raaaerlaaa rrpmlmagg
//
LOCUS       WP_258056700            1004 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258056700
VERSION     WP_258056700.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..1004
                     /product="Ig-like domain-containing protein"
     Region          <1..>992
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          <20..445
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 vnvvarspsn vdsapavitv dgvapaapvi dpsngsviag taeagatvil tdgggnpigq
       61 vtadgsgnwt ftpsiplang tvinavaqdp agntsgpasv tvdaiappap vinpsngvvi
      121 sgtaeagatv iltdgngnpi gqvtadgsgn wtftpgtpla ngsvinalaq daagntsgpa
      181 sttvdsvapa tpvldpsngt visgtaeaga tviltdgggn pigqatadgs gnwsftpgtp
      241 ltngtvinav aqdaagntsg pvsttvdava paipvidpsn gvelsgtaep gvrviltdgn
      301 gnpigqtlad gsgnwsftps tplangtvvn avaqdpagnt sgpasttvdt vapatpvina
      361 sngsvitgta evgakviltd gngnpigett adgsgnwtft pgtplangtv inavaedaag
      421 nasgpasttv dsvapsapll sisadgallt gtaepnsqvr ivvngdtanp itvtvdgagn
      481 fslpfappli tgeliagvav daagnvsgpa tinapdlapp tisvpeaadt winaaeigdg
      541 iqvdvtvrpt mqvgqvvtvk fagqngyeae vshtltagdi aagnltltlt ppggmgpfpe
      601 gastvtadin ggtastpvpf tidtippatp vlslvgnilt isaepgtelt vtvdvggvta
      661 tatvtadnsg laslnlltdl didfswdqll naqvsvvgrd pagnpsntas igvgtsieqp
      721 vtignfgldv slnplnprfg fsgttepdss vvirvitpal nvellpiqad ssgnfslnll
      781 sptiltqlgl nitdilnlgs qisfnlvstd sngndsaayg itltpnglsl nigqidvngt
      841 sgddvlsgan gssehinggd gsdlifnvgt gdhvvagngn dtiqitatdf vsidggagfd
      901 tlvlangidl dynavgvgtl snleridlgk gdsgsvltlt aaevdaitda nntlqitgen
      961 ndtlnvvgav ntgttqling itydvytfgs ttlliedntv qvvl
//
LOCUS       WP_258056753             187 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258056753
VERSION     WP_258056753.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 187)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>187
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          1..>187
                     /region_name="PRK07524"
                     /note="5-guanidino-2-oxopentanoate decarboxylase"
                     /db_xref="CDD:236041"
ORIGIN      
        1 mttcgeflvk qleawgvetv fgipgvhtve lyrglpasri rhvtprheqg agfmadgyar
       61 vtgkpgvcfi itgpgmtnil tamaqayads ipmlvissvn erarlahgng ylhelpnqrn
      121 lvgnvcafsh tlmsaeelpa vlarafavfd serprpvhie lpldvitapa ehlalrprtl
      181 asrpapa
//
LOCUS       WP_258056771             107 aa            linear   BCT 02-MAR-2025
DEFINITION  precorrin-8X methylmutase, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258056771
VERSION     WP_258056771.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 107)
  AUTHORS   Raux,E., Lanois,A., Warren,M.J., Rambach,A. and Thermes,C.
  TITLE     Cobalamin (vitamin B12) biosynthesis: identification and
            characterization of a Bacillus megaterium cobI operon
  JOURNAL   Biochem J 335 (Pt 1) (Pt 1), 159-166 (1998)
   PUBMED   9742225
REFERENCE   2  (residues 1 to 107)
  AUTHORS   Roth,J.R., Lawrence,J.G., Rubenfield,M., Kieffer-Higgins,S. and
            Church,G.M.
  TITLE     Characterization of the cobalamin (vitamin B12) biosynthetic genes
            of Salmonella typhimurium
  JOURNAL   J Bacteriol 175 (11), 3303-3316 (1993)
   PUBMED   8501034
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014612.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02570.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>107
                     /product="precorrin-8X methylmutase"
                     /EC_number="5.4.99.61"
                     /GO_function="GO:0016993 - precorrin-8X methylmutase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
     Region          1..>62
                     /region_name="CbiC"
                     /note="Precorrin-8X methylmutase; cl00913"
                     /db_xref="CDD:445173"
     Region          <57..>107
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 midyirdgqa iyrqsfatir aeanlagipa dleklavrvi hacgmvdvvd dlrfspgaga
       61 agarwhllpw vralplgayc wgrltaslgr ykplillgav llpcgia
//
LOCUS       WP_258056778             242 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258056778
VERSION     WP_258056778.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 242)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>242
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          29..>217
                     /region_name="PRK07524"
                     /note="5-guanidino-2-oxopentanoate decarboxylase"
                     /db_xref="CDD:236041"
ORIGIN      
        1 mgaralrrer rlrwspnwtr ilpmqpqktl tagqalvrll anygvdtvfg ipgvhtlely
       61 rglpgsgirh vltrheqgag fmadgyarvs gkpgvcfvit gpgvtnvata igqayadsvp
      121 llvissvnhs aslgkgwgcl hetqdqramt apitafsala lspeqlpeli arayavfdse
      181 rprpvhisip ldvlaapvah dwsaavarrp grgvpcseal raaaerlaaa rrpmpvsytp
      241 lr
//
LOCUS       WP_258056803            1754 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258056803
VERSION     WP_258056803.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..1754
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>1754
                     /product="Ig-like domain-containing protein"
     Region          20..72
                     /region_name="biofilm_BapA_N"
                     /note="BapA prefix-like domain; NF033677"
                     /db_xref="CDD:411274"
     Region          <161..598
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          578..656
                     /region_name="Big_6"
                     /note="Bacterial Ig domain; pfam17936"
                     /db_xref="CDD:465576"
     Region          <653..>1037
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          1070..1148
                     /region_name="Big_6"
                     /note="Bacterial Ig domain; pfam17936"
                     /db_xref="CDD:465576"
     Region          1152..1230
                     /region_name="Big_6"
                     /note="Bacterial Ig domain; pfam17936"
                     /db_xref="CDD:465576"
     Region          <1213..1690
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 msiqakvtpi dqsissaaav evpengilkl sqssnialdv apesvagysk sgsdlivqlk
       61 tgesvrianf yaegqpssql fladkdklva vdlppvaadg plmagyipqe slagfesltg
      121 agvlggmsag tallvgaaai gagvaisnss gggggggssv ppdttppkaa sglkiapdgs
      181 sisgqaeaga svgidtngdg kpdltviada ngnftaplnp pltngetvtv ivtdpagnss
      241 tpvtaeapdf pdapqvnasn gsvlsgtaea gvtivitdgn gnpigqtsad angnwsftpg
      301 sqlpdgtvvn vvardaagns spatsitvdg vapsapvvep sngselsgta epgssvtltd
      361 gngnpigqtt adangnwsft pstplpdgtv vnvvardaag nssppasvtv davapatptv
      421 dpsngttlsg taepgssvtl tdgngnpigq vtadgsgnwt ftpstplpng tvvnatatdp
      481 sgnasspasv tvdavapatp vvnpsngttl sgtaepgatv tltdgngnpi gqvtadgsgn
      541 wsftpgtpla ngtvvnatas dptgntsapa sttvdsvapa apvvnpsnga eisgtaepga
      601 tvtltdgsgn pigqvtadgs gnwsftpstp ladgtvvnat atdpagntgg qgsttvdaia
      661 patptvnlsn gsslsgtaep gstviltdgn gnpiaevtad gsgnwtytps tpiangtvvn
      721 vvaedaagns sppatvtvds sappapvinp sngvvisgta eagatvtltd aggnpigqvt
      781 adgsgnwsft pgtplangtv ivatatdptg ntgpqaattv davappapvi dpsngttisg
      841 taeagakvil tdgngnpige ttadgsgnwt ftpatplang tvvnavaqdp agntgpqgst
      901 tvdavapntp vvnpsngnll ngtaepgstv tltdgngnpi gqttadgsgn wsftpgsqlp
      961 ngtvvnvtas daagntsppa tttvdsslps ipqvdpsngs visgtadagn tiiitdgngn
     1021 pigqvtadgs gnwsftpgip lpdgtvvnvv arspsnvdsa pavitvdgva paapvidpsn
     1081 gteisgtaea gatviltdgg gnpigqatad gsgnwtftpg tplangtvin avaqdpagnt
     1141 sgpasttvda vapatpvvnp sngsviagta eagatviltd gggnpigqat adgsgnwsft
     1201 pgtplangsv vnavaqdaag ntsgpasttv dsvapatpvl dpsngtvisg taeagatvil
     1261 tdgggnpigq atadgsgnws ftpgtplang svinavaqda agntsgpvst tvdavapatp
     1321 vidpsngvel sgtaepgvrv iltdgngnpi gqtladgsgn wsftpgtpla ngtvvnavaq
     1381 dpagntsgpa sttvdtvapa tpvinasngs vitgtaevga kviltdgngn pigettadgs
     1441 gnwtftpgtp langtvinav aedaagnasg pasttvdsva psapllsisa dgalltgtae
     1501 pnsqvrivvn gdtanpitvt vdgagnfslp fapplitgel iagvavdaag nvsgpatina
     1561 pdlapptisv peaadtwina aeigdgiqvd vtvrptmqvg qvvtvkfagq ngyeaevsht
     1621 ltagdiaagn ltltltppgg mgpfpegast vtadinggta stpvpftidt ippatpvlsl
     1681 agniltisae pgteltvtvd igggtrpptp rrrrprraep tppsptaaql rlhtltqpht
     1741 cecgvgavaq paat
//
LOCUS       WP_258056812             163 aa            linear   BCT 02-MAR-2025
DEFINITION  4Fe-4S dicluster domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258056812
VERSION     WP_258056812.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024581.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13183.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>163
                     /product="4Fe-4S dicluster domain-containing protein"
     Region          1..>136
                     /region_name="PRK06259"
                     /note="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit; Provisional; cl49634"
                     /db_xref="CDD:483974"
ORIGIN      
        1 mqtnlcdsar qraeaaeaer ilrscvhcgf cnatcptyqe lgdeldgprg riylikqfle
       61 rdeasertrl hldrclscrn cettcpsgve yhklldigrd llaerlprgf rqrllrdglr
      121 llaprpglfg vlagaaavss thirahaklr dldynfllyn tii
//
LOCUS       WP_258056963             110 aa            linear   BCT 02-MAR-2025
DEFINITION  AIR synthase related protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258056963
VERSION     WP_258056963.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 110)
  AUTHORS   Li,C., Kappock,T.J., Stubbe,J., Weaver,T.M. and Ealick,S.E.
  TITLE     X-ray crystal structure of aminoimidazole ribonucleotide synthetase
            (PurM), from the Escherichia coli purine biosynthetic pathway at
            2.5 A resolution
  JOURNAL   Structure 7 (9), 1155-1166 (1999)
   PUBMED   10508786
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00586.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>110
                     /product="AIR synthase related protein"
     Region          1..>107
                     /region_name="PRK05731"
                     /note="thiamine monophosphate kinase; Provisional"
                     /db_xref="CDD:235583"
ORIGIN      
        1 mggfelirrf faaaacaapa tevalgigdd callappage qlavstdtlv egvhfpagcd
       61 pfllaqrala vsasdlaamg aaplaftlal tlpqadaewl qgfalslihi
//
LOCUS       WP_258057019             282 aa            linear   BCT 02-MAR-2025
DEFINITION  LLM class flavin-dependent oxidoreductase [Pseudomonas aeruginosa].
ACCESSION   WP_258057019
VERSION     WP_258057019.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012517.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00296.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..282
                     /product="LLM class flavin-dependent oxidoreductase"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /calculated_mol_wt=31459
     Region          <15..178
                     /region_name="Flavin_utilizing_monoxygenases"
                     /note="Flavin-utilizing monoxygenases; cl19096"
                     /db_xref="CDD:450250"
ORIGIN      
        1 msdhqnglhl eaenwpralf avalatldgl sngragvhlv igssdadvrr dgdfadkder
       61 yrraveylev ftralesrdp fdyhgefyrl edagsgflpi qrprpplsvg gssaqaqrla
      121 vrfadvyagh fasptqtael krrlneeaae qgrrlkfwkh fqvilgdspa aaldiaehyr
      181 qaafelllar pldelaaspq vardgerdrl arlepdalre wvantvqrsf agvlvgsvge
      241 vaeqilafhr agieivqlea ttenaedirl rrqlierlrr da
//
LOCUS       WP_258056972             276 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258056972
VERSION     WP_258056972.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 276)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 276)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 276)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 276)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..276
                     /product="ATP-binding protein"
     Region          <2..265
                     /region_name="PRK10337"
                     /note="sensor protein QseC; Provisional"
                     /db_xref="CDD:182388"
ORIGIN      
        1 allwlgagqg laplkrirda ltrrgadsle plelaalpse lkplvetqnq lfqriaqaie
       61 rerrltgdaa helrspltai kthlqvarmt egaaaeqala haeegadrlh rtldqlllla
      121 rvegslsfdd gvqcsaedaa rvamhdaghg dvrmfelkla dglseaplev psvlaiaalr
      181 nlldnalrht aagtrvelav etaqgcarfh vrdhgpgiae tdlphltrrf wrhgksggsg
      241 lglaivqaiv qrcqcrldfd sradglrvtl emplre
//
LOCUS       WP_258057029             338 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258057029
VERSION     WP_258057029.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 338)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>338
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <10..131
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
     Region          119..>333
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mcirdrplea panateaall diwksvlkrp aigvsdnffq vggdsirliq mqvmarqagl
       61 aftlrdvfnh qsirelarll aapaspadal gtsapqtlep fallsaaerk rlpegldday
      121 pmtslqqgml lqseasgdpr llhnvvlhev hgrldgella rawailigrh ailrtgfdlh
      181 ggqaplqwvh patavaaevp vhdlrgldee arrlrlrawi eeeqatpfdw srpplvrlaa
      241 lalderrfal gvaehhsvld gwslqslvde llavyadlla gvvareaeap avgfrdyval
      301 ereaeanags alfwldylag aryrplpgla avsythlr
//
LOCUS       WP_258057073             114 aa            linear   BCT 02-MAR-2025
DEFINITION  precorrin-8X methylmutase, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258057073
VERSION     WP_258057073.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 114)
  AUTHORS   Raux,E., Lanois,A., Warren,M.J., Rambach,A. and Thermes,C.
  TITLE     Cobalamin (vitamin B12) biosynthesis: identification and
            characterization of a Bacillus megaterium cobI operon
  JOURNAL   Biochem J 335 (Pt 1) (Pt 1), 159-166 (1998)
   PUBMED   9742225
REFERENCE   2  (residues 1 to 114)
  AUTHORS   Roth,J.R., Lawrence,J.G., Rubenfield,M., Kieffer-Higgins,S. and
            Church,G.M.
  TITLE     Characterization of the cobalamin (vitamin B12) biosynthetic genes
            of Salmonella typhimurium
  JOURNAL   J Bacteriol 175 (11), 3303-3316 (1993)
   PUBMED   8501034
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014612.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02570.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>114
                     /product="precorrin-8X methylmutase"
                     /EC_number="5.4.99.61"
                     /GO_function="GO:0016993 - precorrin-8X methylmutase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
     Region          1..>56
                     /region_name="CbiC"
                     /note="Precorrin-8X methylmutase; cl00913"
                     /db_xref="CDD:445173"
ORIGIN      
        1 midyirdgqa iyrqsfatir aeanlagipa dleklavrvi hacgmvdvvd dlrfspgaga
       61 agrgarpspa pgggrrappr rsartgraag parprsapai aagadrgcgy gsrr
//
LOCUS       WP_258057083              67 aa            linear   BCT 02-MAR-2025
DEFINITION  AbiEi antitoxin N-terminal domain-containing protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258057083
VERSION     WP_258057083.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 67)
  AUTHORS   Dy,R.L., Przybilski,R., Semeijn,K., Salmond,G.P. and Fineran,P.C.
  TITLE     A widespread bacteriophage abortive infection system functions
            through a Type IV toxin-antitoxin mechanism
  JOURNAL   Nucleic Acids Res 42 (7), 4590-4605 (2014)
   PUBMED   24465005
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028503.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17194.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>67
                     /product="AbiEi antitoxin N-terminal domain-containing
                     protein"
     Region          24..>67
                     /region_name="AbiEi_4"
                     /note="Transcriptional regulator, AbiEi antitoxin;
                     cl46277"
                     /db_xref="CDD:480617"
ORIGIN      
        1 malgvdwilc yfynmdgnsr hqvikrlqag lprgapfdla tlsqfgvspq laahyadggw
       61 lvrlahg
//
LOCUS       WP_258057084             163 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase domain-containing protein [Pseudomonas
            aeruginosa].
ACCESSION   WP_258057084
VERSION     WP_258057084.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 163)
  AUTHORS   Xiong,Y. and Eickbush,T.H.
  TITLE     Origin and evolution of retroelements based upon their reverse
            transcriptase sequences
  JOURNAL   EMBO J 9 (10), 3353-3362 (1990)
   PUBMED   1698615
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00078.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..163
                     /product="reverse transcriptase domain-containing protein"
                     /calculated_mol_wt=18541
     Region          8..>148
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            order(69..74,128)
                     /site_type="other"
                     /note="NTP binding site [chemical binding]"
                     /db_xref="CDD:238185"
     Site            129
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:238185"
ORIGIN      
        1 mgwapsqvvg kvysrvvier vrvrtekwig deqggfrkgr gcvdqiftln cvvekylekk
       61 qkvyvalmdl ekaydrvdre glwkvlriyg vegmllkavk smyegakaav rveseqseff
      121 dlnvglkqgc vmspwlfiiy mgvvmkeilc slhqptllln sin
//
LOCUS       WP_258057088             169 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258057088
VERSION     WP_258057088.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 169)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>169
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          <1..>169
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 lpfdlgtlqe vcskqlgldv qetldiaqal yethkattyp rsdsgylpes mlaevpavld
       61 allatdpslr pligqldrnq rsrawndgkv tahhgiiptl epanlsamne kelavyrlir
      121 ahylaqflph hefdrtvaqf scgsqslaav gkqiavtgwr evlatpgpd
//
LOCUS       WP_258057089             150 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258057089
VERSION     WP_258057089.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 150)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>150
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          <1..150
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 laavgkqiav tgwrevlatp gpddadgeda qrsqvlpalh aglscpvgkv dlkalktlpp
       61 kpytqgelik amktvakfvt dprlkqklrd ttgigteatr antingligr gylvkkgrav
      121 rasdaaftli davpsaiadp gttavweqal
//
LOCUS       WP_258057108             110 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaA ATPase domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258057108
VERSION     WP_258057108.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 110)
  AUTHORS   Erzberger,J.P., Pirruccello,M.M. and Berger,J.M.
  TITLE     The structure of bacterial DnaA: implications for general
            mechanisms underlying DNA replication initiation
  JOURNAL   EMBO J 21 (18), 4763-4773 (2002)
   PUBMED   12234917
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012529.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00308.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>110
                     /product="DnaA ATPase domain-containing protein"
     Region          <55..>110
                     /region_name="dnaA"
                     /note="chromosomal replication initiator protein DnaA;
                     cl42516"
                     /db_xref="CDD:455861"
ORIGIN      
        1 dfcgaaapql rfevgakpas slqkgavspa aaaipaaqvq taraaptivr pgwdnvpapa
       61 eptyrsnvnv khtfdnfveg ksnqlaraaa rqvadnpgga ynplflyggt
//
LOCUS       WP_258057099             117 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein, partial [Pseudomonas aeruginosa].
ACCESSION   WP_258057099
VERSION     WP_258057099.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 117)
  AUTHORS   Aravind,L., Leipe,D.D. and Koonin,E.V.
  TITLE     Toprim--a conserved catalytic domain in type IA and II
            topoisomerases, DnaG-type primases, OLD family nucleases and RecR
            proteins
  JOURNAL   Nucleic Acids Res 26 (18), 4205-4213 (1998)
   PUBMED   9722641
REFERENCE   2  (residues 1 to 117)
  AUTHORS   Szafranski,P., Smith,C.L. and Cantor,C.R.
  TITLE     Cloning and analysis of the dnaG gene encoding Pseudomonas putida
            DNA primase
  JOURNAL   Biochim Biophys Acta 1352 (3), 243-248 (1997)
   PUBMED   9224947
REFERENCE   3  (residues 1 to 117)
  AUTHORS   Bergerat,A., de Massy,B., Gadelle,D., Varoutas,P.C., Nicolas,A. and
            Forterre,P.
  TITLE     An atypical topoisomerase II from Archaea with implications for
            meiotic recombination
  JOURNAL   Nature 386 (6623), 414-417 (1997)
   PUBMED   9121560
REFERENCE   4  (residues 1 to 117)
  AUTHORS   Versalovic,J. and Lupski,J.R.
  TITLE     The Haemophilus influenzae dnaG sequence and conserved bacterial
            primase motifs
  JOURNAL   Gene 136 (1-2), 281-286 (1993)
   PUBMED   8294018
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013878.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01751.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>117
                     /product="toprim domain-containing protein"
     Region          1..>117
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 ysgagvvvtw cighlveavp pegygeqykr waieqlpilp erwrvepkaa taaqfkvvqq
       61 lvakagelvi atdadregem iareiidlcg yhgpiqrlwl salndasirk algalkp
//
LOCUS       WP_258057111              97 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Pseudomonas aeruginosa].
ACCESSION   WP_258057111
VERSION     WP_258057111.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 97)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..97
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <1..90
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 rftrhgvste lktephlgin esnahiaage aglgivqtft yslkpalasg elveilsawr
       61 papypfhvvy arhrhvpprl rvfidwlaav fpaaaqg
//
LOCUS       WP_258057118             104 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-binding protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258057118
VERSION     WP_258057118.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 104)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014795.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02776.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>104
                     /product="thiamine pyrophosphate-binding protein"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          3..>104
                     /region_name="PRK07064"
                     /note="thiamine pyrophosphate-binding protein"
                     /db_xref="CDD:180820"
ORIGIN      
        1 srlgvaltst gagagnavga lveamnagtp llhltgqvek awldadtgfi hetrdqltfl
       61 kasskrayri snanqavail hkaiqeaqtp pcgpvsveip igiq
//
LOCUS       WP_258057219             185 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphatase PAP2 family protein [Streptomyces rutgersensis].
ACCESSION   WP_258057219
VERSION     WP_258057219.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces rutgersensis
  ORGANISM  Streptomyces rutgersensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces; Streptomyces
            diastaticus group.
REFERENCE   1  (residues 1 to 185)
  AUTHORS   Neuwald,A.F.
  TITLE     An unexpected structural relationship between integral membrane
            phosphatases and soluble haloperoxidases
  JOURNAL   Protein Sci 6 (8), 1764-1767 (1997)
   PUBMED   9260289
REFERENCE   2  (residues 1 to 185)
  AUTHORS   Stukey,J. and Carman,G.M.
  TITLE     Identification of a novel phosphatase sequence motif
  JOURNAL   Protein Sci 6 (2), 469-472 (1997)
   PUBMED   9041652
REFERENCE   3  (residues 1 to 185)
  AUTHORS   Messerschmidt,A. and Wever,R.
  TITLE     X-ray structure of a vanadium-containing enzyme: chloroperoxidase
            from the fungus Curvularia inaequalis
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 392-396 (1996)
   PUBMED   8552646
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013718.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01569.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Streptomyces rutgersensis"
                     /db_xref="taxon:53451"
     Protein         1..185
                     /product="phosphatase PAP2 family protein"
                     /calculated_mol_wt=19272
     Region          21..172
                     /region_name="PAP2_like"
                     /note="PAP2_like proteins, a super-family of histidine
                     phosphatases and vanadium haloperoxidases, includes type 2
                     phosphatidic acid phosphatase or lipid phosphate
                     phosphatase (LPP), Glucose-6-phosphatase,
                     Phosphatidylglycerophosphatase B and bacterial acid...;
                     cl00474"
                     /db_xref="CDD:469784"
     Site            order(80,87,99..101,144,150,154)
                     /site_type="active"
                     /db_xref="CDD:239486"
ORIGIN      
        1 mlaaderlgr rihdgalpeg aaefladagg mlvgpvllaa litgqwftar rhgdapywwa
       61 lpltsgvama lvpllvslak vltdrpgpps mggsgffpsg haatacvafg acvlllrram
      121 asryrrwslv aacavfngav gyglvrrgyh wpldvaaswa lgvlllwaav tvargllrrr
      181 gggaa
//
LOCUS       WP_258057236             410 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome P450 [Streptomyces rutgersensis].
ACCESSION   WP_258057236
VERSION     WP_258057236.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces rutgersensis
  ORGANISM  Streptomyces rutgersensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces; Streptomyces
            diastaticus group.
REFERENCE   1  (residues 1 to 410)
  AUTHORS   Werck-Reichhart,D. and Feyereisen,R.
  TITLE     Cytochromes P450: a success story
  JOURNAL   Genome Biol 1 (6), REVIEWS3003 (2000)
   PUBMED   11178272
REFERENCE   2  (residues 1 to 410)
  AUTHORS   Graham-Lorence,S., Amarneh,B., White,R.E., Peterson,J.A. and
            Simpson,E.R.
  TITLE     A three-dimensional model of aromatase cytochrome P450
  JOURNAL   Protein Sci 4 (6), 1065-1080 (1995)
   PUBMED   7549871
REFERENCE   3  (residues 1 to 410)
  AUTHORS   Degtyarenko,K.N. and Archakov,A.I.
  TITLE     Molecular evolution of P450 superfamily and P450-containing
            monooxygenase systems
  JOURNAL   FEBS Lett 332 (1-2), 1-8 (1993)
   PUBMED   8405421
REFERENCE   4  (residues 1 to 410)
  AUTHORS   Nelson,D.R., Kamataki,T., Waxman,D.J., Guengerich,F.P.,
            Estabrook,R.W., Feyereisen,R., Gonzalez,F.J., Coon,M.J.,
            Gunsalus,I.C., Gotoh,O. et al.
  TITLE     The P450 superfamily: update on new sequences, gene mapping,
            accession numbers, early trivial names of enzymes, and nomenclature
  JOURNAL   DNA Cell Biol 12 (1), 1-51 (1993)
   PUBMED   7678494
REFERENCE   5  (residues 1 to 410)
  AUTHORS   Guengerich,F.P.
  TITLE     Reactions and significance of cytochrome P-450 enzymes
  JOURNAL   J Biol Chem 266 (16), 10019-10022 (1991)
   PUBMED   2037557
REFERENCE   6  (residues 1 to 410)
  AUTHORS   Nebert,D.W. and Gonzalez,F.J.
  TITLE     P450 genes: structure, evolution, and regulation
  JOURNAL   Annu Rev Biochem 56, 945-993 (1987)
   PUBMED   3304150
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00067.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Streptomyces rutgersensis"
                     /db_xref="taxon:53451"
     Protein         1..410
                     /product="cytochrome P450"
                     /GO_function="GO:0004497 - monooxygenase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=44440
     Region          30..410
                     /region_name="Cyp158A-like"
                     /note="cytochrome P450 family 158, subfamily A and similar
                     cytochrome P450s; cd11031"
                     /db_xref="CDD:410657"
     Site            order(74,104,108,115,160,244,247..248,250..252,254..255,
                     288,293,299,301,324,351..353,357,359..361,365)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410657"
     Site            order(74,86,89..95,180..183,192,196,200,242..243,246..247,
                     250..251,293..294,298..299)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410657"
ORIGIN      
        1 martdevarp aeeggapprf pfpitsaldp speyarlrte kpvsrvtlps gdiawvvtry
       61 edvrfvfnda rfsrqaatrp eapklmpgve gdpdsivskd apdhtrlrrl vapaftvrri
      121 egmrqgiqtt vdglldameq agapgdvvsl lsaplpiiti cdllgvpasd rdrfrewsdm
      181 mfrtspdele savaarnali gylaamvqer raepaddllg vliaardndd rlserelvsf
      241 agglivagye ttanrlanav lvllrnpgql ealradpeli gdaveellrf ipggaagglm
      301 rvavedvevg gelikagdgv iaitnsanrd eavwedpdrf ditrkpgsht sfghgihhcv
      361 gaqlarlelq igiatllrrf pglrlavpet elpwkknvvi hslealpvaw
//
LOCUS       WP_258057239             157 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: AMP-binding enzyme [Streptomyces diastaticus group].
ACCESSION   WP_258057239
VERSION     WP_258057239.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces diastaticus group
  ORGANISM  Streptomyces diastaticus group
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024591.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13193.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Streptomyces diastaticus group"
                     /db_xref="taxon:2849069"
     Protein         1..157
                     /product="AMP-binding enzyme"
                     /calculated_mol_wt=16708
     Region          <16..84
                     /region_name="MenE/FadK"
                     /note="O-succinylbenzoic acid-CoA ligase MenE or related
                     acyl-CoA synthetase (AMP-forming) [Lipid transport and
                     metabolism]; COG0318"
                     /db_xref="CDD:440087"
ORIGIN      
        1 mavrvkgtrp rtdgleqava yvvarsgcge akvrravnya irgglaaykr parlefrdel
       61 pttstgklaa celrkasaqq rpgtsrappp sptsvpaprr ysprcararr aaglcerspp
      121 tgtgpawptr wttgpravvt srgahrpafh rgpsgsr
//
LOCUS       WP_258057262             181 aa            linear   BCT 02-MAR-2025
DEFINITION  RcpC/CpaB family pilus assembly protein [Streptomyces
            rutgersensis].
ACCESSION   WP_258057262
VERSION     WP_258057262.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces rutgersensis
  ORGANISM  Streptomyces rutgersensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces; Streptomyces
            diastaticus group.
REFERENCE   1  (residues 1 to 181)
  AUTHORS   Tomich,M., Planet,P.J. and Figurski,D.H.
  TITLE     The tad locus: postcards from the widespread colonization island
  JOURNAL   Nat Rev Microbiol 5 (5), 363-375 (2007)
   PUBMED   17435791
REFERENCE   2  (residues 1 to 181)
  AUTHORS   Iyer,L.M. and Aravind,L.
  TITLE     The emergence of catalytic and structural diversity within the
            beta-clip fold
  JOURNAL   Proteins 55 (4), 977-991 (2004)
   PUBMED   15146494
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028286.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16976.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Streptomyces rutgersensis"
                     /db_xref="taxon:53451"
     Protein         1..181
                     /product="RcpC/CpaB family pilus assembly protein"
                     /calculated_mol_wt=17019
ORIGIN      
        1 mpgflepqrl peaegagsaa arasasaagp gsgprdssga asdagsgsaa gtasggrfva
       61 apvrladggt agllragdrv dvlaampaaa gggpgnsarr iatcaevlrv pggpapkepr
      121 keedataapw pgfgttggds egalillrvr rataealaga tagptapagt aesgrlvvav
      181 c
//
LOCUS       WP_258057280             223 aa            linear   BCT 02-MAR-2025
DEFINITION  SMI1/KNR4 family protein [Streptomyces rutgersensis].
ACCESSION   WP_258057280
VERSION     WP_258057280.1
KEYWORDS    RefSeq.
SOURCE      Streptomyces rutgersensis
  ORGANISM  Streptomyces rutgersensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces; Streptomyces
            diastaticus group.
REFERENCE   1  (residues 1 to 223)
  AUTHORS   Zhang,D., Iyer,L.M. and Aravind,L.
  TITLE     A novel immunity system for bacterial nucleic acid degrading toxins
            and its recruitment in various eukaryotic and DNA viral systems
  JOURNAL   Nucleic Acids Res 39 (11), 4532-4552 (2011)
   PUBMED   21306995
REFERENCE   2  (residues 1 to 223)
  AUTHORS   Enderlin,C.S. and Selitrennikoff,C.P.
  TITLE     Cloning and characterization of a Neurospora crassa gene required
            for (1,3) beta-glucan synthase activity and cell wall formation
  JOURNAL   Proc Natl Acad Sci U S A 91 (20), 9500-9504 (1994)
   PUBMED   7937796
REFERENCE   3  (residues 1 to 223)
  AUTHORS   Hong,Z., Mann,P., Brown,N.H., Tran,L.E., Shaw,K.J., Hare,R.S. and
            DiDomenico,B.
  TITLE     Cloning and characterization of KNR4, a yeast gene involved in
            (1,3)-beta-glucan synthesis
  JOURNAL   Mol Cell Biol 14 (2), 1017-1025 (1994)
   PUBMED   8289782
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020904.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09346.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Streptomyces rutgersensis"
                     /db_xref="taxon:53451"
     Protein         1..223
                     /product="SMI1/KNR4 family protein"
                     /calculated_mol_wt=24528
     Region          14..178
                     /region_name="SMI1"
                     /note="Cell wall assembly regulator SMI1 (Killer
                     toxin-resistance protein 4) [Cell wall/membrane/envelope
                     biogenesis]; COG4282"
                     /db_xref="CDD:443423"
ORIGIN      
        1 madqpgldgp tvqvavawgr iekwlrahap asaallrspa seddlasaee siglslpstl
       61 cawyrlhdgi nepaegaslw ptaflpgrqa wysldrleda ymvqtrdwer epghvpfscv
      121 mgdiwhglyv darpeeesyg dvgrwtvehe peplaqgsag wplerwmgdv adaleqgrcl
      181 vgpggrried mwpaltvcgg ltwvdphdar ripegrvlld gpr
//
LOCUS       WP_258057512            1778 aa            linear   BCT 02-MAR-2025
DEFINITION  calcium-binding protein [Xylella fastidiosa].
ACCESSION   WP_258057512
VERSION     WP_258057512.1
KEYWORDS    RefSeq.
SOURCE      Xylella fastidiosa
  ORGANISM  Xylella fastidiosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xylella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018319.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06594.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1778
                     /organism="Xylella fastidiosa"
                     /db_xref="taxon:2371"
     Protein         1..1778
                     /product="calcium-binding protein"
                     /calculated_mol_wt=188717
     Region          1046..1090
                     /region_name="HCBP_related"
                     /note="Haemolysin-type calcium binding protein related
                     domain; pfam06594"
                     /db_xref="CDD:429022"
     Region          1211..1256
                     /region_name="HCBP_related"
                     /note="Haemolysin-type calcium binding protein related
                     domain; pfam06594"
                     /db_xref="CDD:429022"
     Region          1299..1546
                     /region_name="COG2931"
                     /note="Ca2+-binding protein, RTX toxin-related [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:442175"
     Region          1554..1599
                     /region_name="HCBP_related"
                     /note="Haemolysin-type calcium binding protein related
                     domain; pfam06594"
                     /db_xref="CDD:429022"
     Region          1703..1742
                     /region_name="HCBP_related"
                     /note="Haemolysin-type calcium binding protein related
                     domain; pfam06594"
                     /db_xref="CDD:429022"
ORIGIN      
        1 msltveqana llgsittqeq lrdlinqldi hssgsitily sgytangvsn sqilqgmlhn
       61 gdtirvidtt eaarflnvdp ttanwnkply qkleqiiggk pdkwgtpanq flfgeraadg
      121 trlpngawdt isarfvnetv gevrtltgga svtgvfnqte lprllnnpni tsvdglpiad
      181 lrrlgaagsf qaisaqsehl sgylklavna dgsimklsgg ipcvdsqqyf altglegkpp
      241 lvdagdygal aryiparldn hlegarlvqd ikdgyqrttq llgpesaaar analrvlgkl
      301 gvaadllsla vmahdanaay asgniegsrq ivqdwtsqyl gglmgglaea kavgllltpv
      361 yldgpigaav asvltvaagv egtflgshyi gafldkvfdq lhhigelsgs rlydwvtqig
      421 dlfrrlnqtl htdnaslldl lhdlfrnsrd erdplvldld gdgietlaag khilfdhdgd
      481 githasgwvk sddgllvldr ngngridngs elfgadtvls nghtaasgfd alrdldsngd
      541 glfsaadarf tdvrvwrdln qdgqsqanel ftlsnlgias itltptdtqr vnlgngnvmd
      601 argsytrtdg rsgtvgnlql gvdqfyrdyr gahdtvtise aaralpaisg sgavrdlqea
      661 aslspallaa vqallsgttq gtlraaldqv ialwaststm rsseelleas gegnrtvyyh
      721 ayaffapntv taqgnkavqa wmqqqhaqlg piigilekfn gsrlvseqng qitmngqirt
      781 wqrvvrpdgh seevmdlall pevvsdsfda fteayaklke siyirlvlep rlndylsglt
      841 ltynngvmgw dasgleakld qtwqhnkaqa lqdvmdlqry grdalapsgw npldalcqmv
      901 yrtaatpdgr qaladagipl iagnaegsaa mdllfgdaga nllrggggdd vlsggdgddv
      961 ldggegsnrl eggaghdvln vangwnnvln ggsgddllyg sffadtylfn kgdghdtlie
     1021 qggddklvfg vgivanqvrl lregqdvvld lgngqdsirl kdwltfygar nhsadieqiv
     1081 fadgtvwtge tlstlglttl gtsgndilng wqgndlllgg dgddvldggd gsnrleggag
     1141 hdvlnvangw nnvlnggsgd dllygsffad tylfkkgdgr dtlieqggad klvfgagiia
     1201 sqvrllhegq dvvldlgngq dsiclkdwlt fygarnhsad ieqivfadgt vwtgetlstl
     1261 gfstlggdgd dvldggeasn rleggagndv lkvasnssdn vfsggtgddm lygsahsdty
     1321 lfnqgdghdt iiepggsfdr lvfgegitad dvrvvrqgqd vvldlgnghd sirmkdwlts
     1381 dgeynrtgni eeilfadgtr wtgdtlgwre mttfgtsgnd tlqgwgssdi llggngddvl
     1441 sgdygddtly geagddlllg dngndvldgg eghnrlegga gkdvlkvstd gssdnvfsgg
     1501 tgddmlygsv hsdtylfnwg dgrdtiveqg gfdkivfgeg iavsdihvlr egqdvvldly
     1561 ngydsirlkd wltsdgtrns nadieqivfa dgtvwsgetl ssiglktlgs adndtlngwn
     1621 grnilvgedg ddvlkvsmfd ssdnvlvgcr gndmlygssn sdtyffdqgd ghdtiieqgg
     1681 adtlefgegl hreeacftrs gddlsllfng sedqvtvagw fsaaahqves lvfqdgavls
     1741 geverliaam alspavttmq asvrdikesp rlvassiv
//
LOCUS       WP_258057531             470 aa            linear   BCT 02-MAR-2025
DEFINITION  SNF2-related protein [Xylella fastidiosa].
ACCESSION   WP_258057531
VERSION     WP_258057531.1
KEYWORDS    RefSeq.
SOURCE      Xylella fastidiosa
  ORGANISM  Xylella fastidiosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xylella.
REFERENCE   1  (residues 1 to 470)
  AUTHORS   Rowbotham,S.P., Barki,L., Neves-Costa,A., Santos,F., Dean,W.,
            Hawkes,N., Choudhary,P., Will,W.R., Webster,J., Oxley,D.,
            Green,C.M., Varga-Weisz,P. and Mermoud,J.E.
  TITLE     Maintenance of silent chromatin through replication requires
            SWI/SNF-like chromatin remodeler SMARCAD1
  JOURNAL   Mol Cell 42 (3), 285-296 (2011)
   PUBMED   21549307
REFERENCE   2  (residues 1 to 470)
  AUTHORS   Linder,B., Cabot,R.A., Schwickert,T. and Rupp,R.A.
  TITLE     The SNF2 domain protein family in higher vertebrates displays
            dynamic expression patterns in Xenopus laevis embryos
  JOURNAL   Gene 326, 59-66 (2004)
   PUBMED   14729263
REFERENCE   3  (residues 1 to 470)
  AUTHORS   Eisen,J.A., Sweder,K.S. and Hanawalt,P.C.
  TITLE     Evolution of the SNF2 family of proteins: subfamilies with distinct
            sequences and functions
  JOURNAL   Nucleic Acids Res 23 (14), 2715-2723 (1995)
   PUBMED   7651832
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012403.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00176.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Xylella fastidiosa"
                     /db_xref="taxon:2371"
     Protein         1..470
                     /product="SNF2-related protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0140658 - ATP-dependent chromatin
                     remodeler activity [Evidence IEA]"
                     /calculated_mol_wt=52620
     Region          3..226
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(26..32,125)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
ORIGIN      
        1 mnlrpyqhti vdfilthprc nlfvpmglgk tvatltaldv llvvediapi lviaplrvaa
       61 ttwpdevakf phlrhlrvsv vvgsaaarrh aleqdadiyc inydnlkwlv efykdrwpfr
      121 mvvadecskl kgfrlrqgtr raralakhvh tkveryiglt gtpapnglqd lwalmwmvdr
      181 garlgthfka fidrwfravq igsdphavrl vpapnasqei qdkirdlcls ldphayfdlr
      241 qpivntirva lpehaqrlyk ameqdmfial ecgteveafn aasktikclq langalytdd
      301 trqawevvhd aklealhdii eeaagmpvlv ayhfksdvar lqrafpkgra ldknpdtird
      361 wnagnipvlf ahpasaghgl nlqdggnila ffghwwaqvr ngvlmrtctv cggsgtvpis
      421 drkraaalgr dvstycmrwr glyewllekl raaeqhaaae lkaalledaa
//
LOCUS       WP_258057610              84 aa            linear   BCT 02-MAR-2025
DEFINITION  calcium-binding protein, partial [Xylella fastidiosa].
ACCESSION   WP_258057610
VERSION     WP_258057610.1
KEYWORDS    RefSeq.
SOURCE      Xylella fastidiosa
  ORGANISM  Xylella fastidiosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xylella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018319.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06594.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Xylella fastidiosa"
                     /db_xref="taxon:2371"
     Protein         <1..>84
                     /product="calcium-binding protein"
     Region          24..69
                     /region_name="HCBP_related"
                     /note="Haemolysin-type calcium binding protein related
                     domain; pfam06594"
                     /db_xref="CDD:429022"
ORIGIN      
        1 gtdklvfgeg iaaadvrllr qgqdvvldlg nghdsirlkd wltaegrrny sadieqivfa
       61 dgtlwtpetl ssmglttlgt sgnd
//
LOCUS       WP_258057619              52 aa            linear   BCT 02-MAR-2025
DEFINITION  shikimate kinase, partial [Xylella fastidiosa].
ACCESSION   WP_258057619
VERSION     WP_258057619.1
KEYWORDS    RefSeq.
SOURCE      Xylella fastidiosa
  ORGANISM  Xylella fastidiosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xylella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013375.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01202.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..52
                     /organism="Xylella fastidiosa"
                     /db_xref="taxon:2371"
     Protein         1..>52
                     /product="shikimate kinase"
     Region          1..>51
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Site            order(11,16..19)
                     /site_type="active"
                     /db_xref="CDD:238260"
ORIGIN      
        1 mnpapnlvmi gpmgagkssi grriakhfnl hfadtdhaiv eragtsisti fk
//
LOCUS       WP_258057629             192 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit, partial [Serratia marcescens].
ACCESSION   WP_258057629
VERSION     WP_258057629.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00528.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         <1..192
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <11..192
                     /region_name="PRK15082"
                     /note="glutathione ABC transporter permease GsiD;
                     Provisional"
                     /db_xref="CDD:185040"
ORIGIN      
        1 qsvptkpvnc mgllagyyeg wwdrltmrvc dvlfafpgil laigvvaimg sgmanvivav
       61 aifsipafar lvrgntlvlk hltyiesars igasdwtiil rhilpgtlss ivvyftlrig
      121 tsiitaasls flglgaqppt pewgamlnea radmviaphv aifpslaifi tvlafnllgd
      181 glrdaldpkl kg
//
LOCUS       WP_258057641              92 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme, partial [Serratia marcescens].
ACCESSION   WP_258057641
VERSION     WP_258057641.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 92)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 92)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         1..>92
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          1..>92
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
ORIGIN      
        1 mfekitaapa dpilgltdif radarpnkin lgigvykdet gktpvltsvk kaeqyllene
       61 ttknylgieg ipafasctqe llfgkespiv td
//
LOCUS       WP_258057695             117 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase, partial [Serratia
            marcescens].
ACCESSION   WP_258057695
VERSION     WP_258057695.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 117)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 117)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         <1..117
                     /product="SDR family NAD(P)-dependent oxidoreductase"
     Region          <1..115
                     /region_name="PRK08017"
                     /note="SDR family oxidoreductase"
                     /db_xref="CDD:181198"
ORIGIN      
        1 grgayaaskf aleawsdalr melhgsgiqv sliepgpist hfsqnvnqaq sdkpvhnpgi
       61 akrltlppea ilpklrhale spraklrypv tllahamsvl rrilpgrcld wllrsna
//
LOCUS       WP_258057698             231 aa            linear   BCT 02-MAR-2025
DEFINITION  DALR domain-containing protein, partial [Serratia marcescens].
ACCESSION   WP_258057698
VERSION     WP_258057698.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 231)
  AUTHORS   Wolf,Y.I., Aravind,L., Grishin,N.V. and Koonin,E.V.
  TITLE     Evolution of aminoacyl-tRNA synthetases--analysis of unique domain
            architectures and phylogenetic trees reveals a complex history of
            horizontal gene transfer events
  JOURNAL   Genome Res 9 (8), 689-710 (1999)
   PUBMED   10447505
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09190.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         <1..231
                     /product="DALR domain-containing protein"
                     /GO_component="GO:0005737 - cytoplasm [Evidence IEA]"
                     /GO_function="GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /GO_function="GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
     Region          <1..231
                     /region_name="CysS"
                     /note="Cysteinyl-tRNA synthetase [Translation, ribosomal
                     structure and biogenesis]; COG0215"
                     /db_xref="CDD:439985"
ORIGIN      
        1 mfphheneia qsscahdgpy vnywmhsgmv midkekmsks ldnfftirdv lghydaetvr
       61 yflmsghyrs qlnyseenlk qartalerly talrgtdada apaggeafea rfreamdddf
      121 ntpeaysalf dlarevnrlk sedmaaangm aaelrklakv lgllqqepeq flqggaqvdd
      181 gevaeieali kqrnearaak dwaladaard rlnemnivle dgpqgttwrr k
//
LOCUS       WP_258057727             132 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleoside hydrolase, partial [Serratia marcescens].
ACCESSION   WP_258057727
VERSION     WP_258057727.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 132)
  AUTHORS   Degano,M., Gopaul,D.N., Scapin,G., Schramm,V.L. and
            Sacchettini,J.C.
  TITLE     Three-dimensional structure of the inosine-uridine nucleoside
            N-ribohydrolase from Crithidia fasciculata
  JOURNAL   Biochemistry 35 (19), 5971-5981 (1996)
   PUBMED   8634238
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01156.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         <1..132
                     /product="nucleoside hydrolase"
                     /GO_function="GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA]"
     Region          <1..125
                     /region_name="nuc_hydro"
                     /note="Nucleoside hydrolases. Nucleoside hydrolases cleave
                     the N-glycosidic bond in nucleosides generating ribose and
                     the respective base. These enzymes vary in their substrate
                     specificity. This group contains eukaryotic, bacterial and
                     archeal proteins similar...; cl00226"
                     /db_xref="CDD:469670"
ORIGIN      
        1 wpltmvgldl thqalatpav ceriaalgtr paafvgella ffgrmyqqaq gfsappvhdp
       61 cavayvidps vmsvrkapvn ieltgtltlg mtvadfrapp ppdchtqvav kldqdkfwdl
      121 vvdalerige ve
//
LOCUS       WP_258057738             182 aa            linear   BCT 02-MAR-2025
DEFINITION  primase-like DNA-binding domain-containing protein, partial
            [Serratia marcescens].
ACCESSION   WP_258057738
VERSION     WP_258057738.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 182)
  AUTHORS   Evans,E., Klemperer,N., Ghosh,R. and Traktman,P.
  TITLE     The vaccinia virus D5 protein, which is required for DNA
            replication, is a nucleic acid-independent nucleoside
            triphosphatase
  JOURNAL   J Virol 69 (9), 5353-5361 (1995)
   PUBMED   7636979
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015259.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03288.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         <1..182
                     /product="primase-like DNA-binding domain-containing
                     protein"
     Region          <1..170
                     /region_name="COG3378"
                     /note="DNA primase, phage- or plasmid-associated
                     [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442605"
ORIGIN      
        1 nnpmqfsdrs ggisrrrvil pfpeaiapee rdplllakit eelavivrhl mqrftnpnda
       61 rallqaqqss aealeikrya dplvdfcgyl tvlgtpegmm ignanitppn prrylyhayl
      121 sfmaargyqh vmnltafgqa vpqtlkeyeh tllkrrtkqg iqtnlilsdd ceadwlpkcs
      181 sl
//
LOCUS       WP_258057758             362 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin cofactor-binding domain-containing protein, partial
            [Serratia marcescens].
ACCESSION   WP_258057758
VERSION     WP_258057758.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 362)
  AUTHORS   Dobbek,H., Gremer,L., Meyer,O. and Huber,R.
  TITLE     Crystal structure and mechanism of CO dehydrogenase, a molybdo
            iron-sulfur flavoprotein containing S-selanylcysteine
  JOURNAL   Proc Natl Acad Sci U S A 96 (16), 8884-8889 (1999)
   PUBMED   10430865
REFERENCE   2  (residues 1 to 362)
  AUTHORS   Romao,M.J., Archer,M., Moura,I., Moura,J.J., LeGall,J., Engh,R.,
            Schneider,M., Hof,P. and Huber,R.
  TITLE     Crystal structure of the xanthine oxidase-related aldehyde
            oxido-reductase from D. gigas
  JOURNAL   Science 270 (5239), 1170-1176 (1995)
   PUBMED   7502041
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042649.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20256.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         1..>362
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
     Region          <51..214
                     /region_name="CoxL"
                     /note="Aldehyde, CO or xanthine dehydrogenase, Mo-binding
                     subunit [Energy production and conversion]; COG1529"
                     /db_xref="CDD:441138"
     Region          183..>354
                     /region_name="CoxL"
                     /note="Aldehyde, CO or xanthine dehydrogenase, Mo-binding
                     subunit [Energy production and conversion]; COG1529"
                     /db_xref="CDD:441138"
ORIGIN      
        1 mtdsrtpsps qaellqrdgv llivdsvqpp pglvpkgqtp vlkpkeqglf ialcgsgeiy
       61 afnghvdlgt gvrtalgqiv aeelylrmdq vqmvlgdter apnqgatias atlqisavpl
      121 rnaaaearrw llrqaaqrfd apveqltlee gvirspqgqa lsyaelvagg hvelsisgda
      181 plkpqaeyrl vgtsaarvdi pakatgetty vhdmrlpnml hgrvvrppya gydsgefvgt
      241 sllavdetsi ahipgivklv vigdfigiva ereeqavkaa qalqvswkdw rrnlpqmtdv
      301 aqalrdnphs trvvhdtgdv daalaaadrr ftrsylwpyq lhasigpsca swpdrppgrs
      361 ly
//
LOCUS       WP_258057769             371 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Serratia marcescens].
ACCESSION   WP_258057769
VERSION     WP_258057769.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 371)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         1..>371
                     /product="AMP-binding protein"
     Region          4..>371
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(169,172..177,179..180)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
ORIGIN      
        1 mlnlatllee sartwperpa viqddiplsy ralnemanrv anllvargvq pgervalacp
       61 nrpefpaiyy gilksgavvv plnillksae fdyyladsaa valfcfegss glplgeealr
      121 aaakaeqcre vfiigdrlpl egerfsaaia aqatefasaa tlesdtavvl ytsgttgrak
      181 gaelthanlv lnalgsvrlf dgsetdpdrh lvtlplfhtf gstvqmnagf saaatlvlve
      241 rfdaaqaial mqrhgitffa gvptmywall naldehtdie rlrstlrmav sggaslpvqi
      301 ledfsrrfgv nilegyglse tspvatfnhp hrvtkpgsig qpiwgvevrl ldvtgqpidg
      361 vdqvgeiavr g
//
LOCUS       WP_258057770             495 aa            linear   BCT 02-MAR-2025
DEFINITION  efflux RND transporter permease subunit, partial [Serratia
            marcescens].
ACCESSION   WP_258057770
VERSION     WP_258057770.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 495)
  AUTHORS   Murakami,S., Nakashima,R., Yamashita,E. and Yamaguchi,A.
  TITLE     Crystal structure of bacterial multidrug efflux transporter AcrB
  JOURNAL   Nature 419 (6907), 587-593 (2002)
   PUBMED   12374972
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00873.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         <1..495
                     /product="efflux RND transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <1..490
                     /region_name="ACR_tran"
                     /note="AcrB/AcrD/AcrF family; cl47191"
                     /db_xref="CDD:481531"
ORIGIN      
        1 vmylrlptgf lpnedqgsvm vqytlpagat nartsavsea vtayfleqek anvstiftin
       61 gfgfsgsgqn agmafvslkd wsqrggsent adaiakrama hfaslrdaqv fsmsppaidg
      121 fgqsdgftfe lqakgattra elqamrdqiv aaaagnpsll avrantlpdt pqlqveidsg
      181 klqalglsag dvnstlssaf gstyvndfid rnrvkkvymq gdvayrakpe dldkwfvrgt
      241 naagdssmtp fsalasshwi ygpenlsryn glssfeitgq gaagvssgta msemeklaak
      301 fsagssysws glsyqerlts gqasslyais livvflclaa lyeswsipfa vmlvvpmgiv
      361 gsllaitlrg lendiyfqva lltivglsak nailivefae emhqrgetli gaavhaarmr
      421 lrpilmtsla ftagvlplav ssgagansri aigtgiiggt itatalaiff vplfyvlvrr
      481 mftrrpansp sqage
//
LOCUS       WP_258057800             160 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Serratia marcescens].
ACCESSION   WP_258057800
VERSION     WP_258057800.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         1..>160
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          17..>160
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mqseinapsk tggkkvifaa sfgnaleffd fgiynffviy isvlffppss dpnlalllaf
       61 atfgvsfimr plggiligay adrrgrkpam iltislmslg tamigfapty asagywgtit
      121 lvvarliqgv aaggevgasm sllvesappn rrgfysswsl
//
LOCUS       WP_258057799             223 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein, partial
            [Serratia marcescens].
ACCESSION   WP_258057799
VERSION     WP_258057799.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 223)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         1..>223
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..>223
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(7,9..10,12,31..33,83..85,125..127,152,156,179..182)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(103,127,152,156)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mkflvtgaag figyhvaerl ltaehqvvgi dnlndyydvg lkmarldrla dkpgfrfikl
       61 dladregmat lfaehqfqrv ihlgaqagvr yslvnplaya danlighlnv legcrhnkve
      121 hllyassssv yglnrklpfa tedsvdhpvs lyaatkkane lmshsyahly glpttglrff
      181 tvygpwgrpd malfkftkai lagesidvyn hgemhrdfty idd
//
LOCUS       WP_258057806              98 aa            linear   BCT 02-MAR-2025
DEFINITION  fatty acid desaturase, partial [Serratia marcescens].
ACCESSION   WP_258057806
VERSION     WP_258057806.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 98)
  AUTHORS   Shen,J., Wu,G., Tsai,A.L. and Zhou,M.
  TITLE     Structure and Mechanism of a Unique Diiron Center in Mammalian
            Stearoyl-CoA Desaturase
  JOURNAL   J Mol Biol 432 (18), 5152-5161 (2020)
   PUBMED   32470559
REFERENCE   2  (residues 1 to 98)
  AUTHORS   Wang,H., Klein,M.G., Zou,H., Lane,W., Snell,G., Levin,I., Li,K. and
            Sang,B.C.
  TITLE     Crystal structure of human stearoyl-coenzyme A desaturase in
            complex with substrate
  JOURNAL   Nat Struct Mol Biol 22 (7), 581-585 (2015)
   PUBMED   26098317
REFERENCE   3  (residues 1 to 98)
  AUTHORS   Lindqvist,Y., Huang,W., Schneider,G. and Shanklin,J.
  TITLE     Crystal structure of delta9 stearoyl-acyl carrier protein
            desaturase from castor seed and its relationship to other di-iron
            proteins
  JOURNAL   EMBO J 15 (16), 4081-4092 (1996)
   PUBMED   8861937
REFERENCE   4  (residues 1 to 98)
  AUTHORS   Shanklin,J. and Somerville,C.
  TITLE     Stearoyl-acyl-carrier-protein desaturase from higher plants is
            structurally unrelated to the animal and fungal homologs
  JOURNAL   Proc Natl Acad Sci U S A 88 (6), 2510-2514 (1991)
   PUBMED   2006187
REFERENCE   5  (residues 1 to 98)
  AUTHORS   Wada,H., Gombos,Z. and Murata,N.
  TITLE     Enhancement of chilling tolerance of a cyanobacterium by genetic
            manipulation of fatty acid desaturation
  JOURNAL   Nature 347 (6289), 200-203 (1990)
   PUBMED   2118597
REFERENCE   6  (residues 1 to 98)
  AUTHORS   Kaestner,K.H., Ntambi,J.M., Kelly,T.J. Jr. and Lane,M.D.
  TITLE     Differentiation-induced gene expression in 3T3-L1 preadipocytes. A
            second differentially expressed gene encoding stearoyl-CoA
            desaturase
  JOURNAL   J Biol Chem 264 (25), 14755-14761 (1989)
   PUBMED   2570068
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012699.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00487.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         <1..98
                     /product="fatty acid desaturase"
                     /EC_number="1.14.19.-"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
     Region          <7..59
                     /region_name="Membrane-FADS-like"
                     /note="The membrane fatty acid desaturase
                     (Membrane_FADS)-like CD includes membrane FADSs, alkane
                     hydroxylases, beta carotene ketolases (CrtW-like),
                     hydroxylases (CrtR-like), and other related proteins. They
                     are present in all groups of organisms with the...;
                     cl00615"
                     /db_xref="CDD:445012"
ORIGIN      
        1 aefypaptgg smpqgwyrhn fatacdwqpe prwlehltgg lnyhlthhlf pgwnhrhypa
       61 laaavaevaq rhdmayrcig yrellaqqqr flrlmgqp
//
LOCUS       WP_258057858             235 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha amylase N-terminal ig-like domain-containing protein, partial
            [Serratia marcescens].
ACCESSION   WP_258057858
VERSION     WP_258057858.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 235)
  AUTHORS   Kamitori,S., Kondo,S., Okuyama,K., Yokota,T., Shimura,Y.,
            Tonozuka,T. and Sakano,Y.
  TITLE     Crystal structure of Thermoactinomyces vulgaris R-47 alpha-amylase
            II (TVAII) hydrolyzing cyclodextrins and pullulan at 2.6 A
            resolution
  JOURNAL   J Mol Biol 287 (5), 907-921 (1999)
   PUBMED   10222200
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014902.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02903.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         1..>235
                     /product="alpha amylase N-terminal ig-like
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          1..>235
                     /region_name="PRK10785"
                     /note="maltodextrin glucosidase; Provisional"
                     /db_xref="CDD:236759"
ORIGIN      
        1 mlnawhqpvp pfvvkqgqrl ditlwlqgde lpervflrae pdneewllvm kaqrhegmrr
       61 yqasltlneg eptrrycfkl lwadrqqwfg pqgwsptppg qlaqfavddp dngpewvadq
      121 lfyqifpdrf assggehgiq sgsyrhhaag aevirrdwqh pledrhaast fyggdldgis
      181 gklpylqqlg vtalylnpif tapsvhkydt edyyqvdphf ggnaalqrlr vsthk
//
LOCUS       WP_258057836              86 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase, partial [Serratia
            marcescens].
ACCESSION   WP_258057836
VERSION     WP_258057836.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 86)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 86)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         1..>86
                     /product="SDR family NAD(P)-dependent oxidoreductase"
     Region          9..>86
                     /region_name="YdfG"
                     /note="NADP-dependent 3-hydroxy acid dehydrogenase YdfG
                     [Energy production and conversion]; COG4221"
                     /db_xref="CDD:443365"
ORIGIN      
        1 mnrvvvitgg gtgvgaacar llaaqgdrvf iigrrpepla alaheigaqa lvgdaasges
       61 wahtllpail rdagridcli gsaggm
//
LOCUS       WP_258057862             424 aa            linear   BCT 02-MAR-2025
DEFINITION  SgrR family transcriptional regulator, partial [Serratia
            marcescens].
ACCESSION   WP_258057862
VERSION     WP_258057862.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 424)
  AUTHORS   Vanderpool,C.K. and Gottesman,S.
  TITLE     The novel transcription factor SgrR coordinates the response to
            glucose-phosphate stress
  JOURNAL   J Bacteriol 189 (6), 2238-2248 (2007)
   PUBMED   17209026
REFERENCE   2  (residues 1 to 424)
  AUTHORS   Vanderpool,C.K. and Gottesman,S.
  TITLE     Involvement of a novel transcriptional activator and small RNA in
            post-transcriptional regulation of the glucose phosphoenolpyruvate
            phosphotransferase system
  JOURNAL   Mol Microbiol 54 (4), 1076-1089 (2004)
   PUBMED   15522088
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024203.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12793.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         1..>424
                     /product="SgrR family transcriptional regulator"
     Region          1..>423
                     /region_name="SgrR"
                     /note="DNA-binding transcriptional regulator SgrR of sgrS
                     sRNA, contains a MarR-type HTH domain and a
                     periplasmic-type solute-binding domain [Transcription];
                     COG4533"
                     /db_xref="CDD:443600"
ORIGIN      
        1 mrlvhrlsqy qrlyqqlgsa pvavtigela amfycserha rtlvqqlqdq gwlswhsqpg
       61 rgkrarlhcl ktpdelraql lqqllqqgnh qgalemaqld pqhlqdllsp hlggqwqags
      121 ptlripyyrt lealdpltlt graeqhlvst lhagltrlmt gnpepqpdla hhwqisdrgl
      181 rwrfflrsql rwhngepltg hqllqtlekl qrhprsqpsl anvarislph plciqfdlhl
      241 pdywlahrla elpclmthpe lpaigagpfk ltlnepqlvr leqhagyhlq hpyldtieyw
      301 itpdlptagt ntscqhpvri tigqqddlaq arpvqrsmsl gwcylalnlr hgvlneaqgq
      361 kllmliqqsg llshlpipns vitpshemlp gwriprqqve edvalparlt llyrppvele
      421 tvta
//
LOCUS       WP_258057903             131 aa            linear   BCT 02-MAR-2025
DEFINITION  metal ABC transporter solute-binding protein, Zn/Mn family, partial
            [Serratia marcescens].
ACCESSION   WP_258057903
VERSION     WP_258057903.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 131)
  AUTHORS   Ilari,A., Alaleona,F., Tria,G., Petrarca,P., Battistoni,A.,
            Zamparelli,C., Verzili,D., Falconi,M. and Chiancone,E.
  TITLE     The Salmonella enterica ZinT structure, zinc affinity and
            interaction with the high-affinity uptake protein ZnuA provide
            insight into the management of periplasmic zinc
  JOURNAL   Biochim Biophys Acta 1840 (1), 535-544 (2014)
   PUBMED   24128931
REFERENCE   2  (residues 1 to 131)
  AUTHORS   Gabbianelli,R., Scotti,R., Ammendola,S., Petrarca,P., Nicolini,L.
            and Battistoni,A.
  TITLE     Role of ZnuABC and ZinT in Escherichia coli O157:H7 zinc
            acquisition and interaction with epithelial cells
  JOURNAL   BMC Microbiol 11, 36 (2011)
   PUBMED   21338480
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 131)
  AUTHORS   Lee,Y.H., Deka,R.K., Norgard,M.V., Radolf,J.D. and Hasemann,C.A.
  TITLE     Treponema pallidum TroA is a periplasmic zinc-binding protein with
            a helical backbone
  JOURNAL   Nat Struct Biol 6 (7), 628-633 (1999)
   PUBMED   10404217
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013465.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01297.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         1..>131
                     /product="metal ABC transporter solute-binding protein,
                     Zn/Mn family"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
     Region          8..>131
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
ORIGIN      
        1 mkrlpislav aallasplam aktvdavasf silgdivkqv ggdhvkvstl vgpdgdphsf
       61 epspqdgkkl aqadvvfvsg lglegwidrl vnasgykgqv itasqgintr qmeedgkpit
      121 dphawnsmkn g
//
LOCUS       WP_258057905             256 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein, partial [Serratia
            marcescens].
ACCESSION   WP_258057905
VERSION     WP_258057905.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 256)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         <1..256
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
     Region          <1..245
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
ORIGIN      
        1 hlahiaadkl iptslelggk sptivledad leqaargicy gifssagqac iagsrlfvhr
       61 slyqpllsrl teltaglrig nplvpgvhlg plisakhrqs vadyvalarq eggrvvigge
      121 apadpqlasg syylptiieg lnndarvcqe eifgpvlval pfddeqqlie qandsvygla
      181 agiwsrdfpr amalaerlet gtvwvntykt fsistpfggf kesglgrekg lngikaymqq
      241 ksvylalshq vnrwsd
//
LOCUS       WP_258057906             233 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein, partial [Serratia
            marcescens].
ACCESSION   WP_258057906
VERSION     WP_258057906.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 233)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         1..>233
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
     Region          22..>233
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
ORIGIN      
        1 merlnifvag rwregrgeem asvfpadgsv narlraanve dvneaveaae rawrapewrg
       61 lvphqrasil yrvsnlilaq qeqlaelqtr dngkplaetr glvasaaata ryfaaacevl
      121 egelptprsa evmtlsqyqp mgviaaitpw nspiasemqk vapalaagna vvlkpaeatp
      181 lmalklaelf eqaglpagll svlpgkgsvi gealarhplv kkisftggts tgr
//
LOCUS       WP_258057945             196 aa            linear   BCT 02-MAR-2025
DEFINITION  Gfo/Idh/MocA family oxidoreductase, partial [Serratia marcescens].
ACCESSION   WP_258057945
VERSION     WP_258057945.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 196)
  AUTHORS   Kingston,R.L., Scopes,R.K. and Baker,E.N.
  TITLE     The structure of glucose-fructose oxidoreductase from Zymomonas
            mobilis: an osmoprotective periplasmic enzyme containing
            non-dissociable NADP
  JOURNAL   Structure 4 (12), 1413-1428 (1996)
   PUBMED   8994968
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014893.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02894.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         <1..196
                     /product="Gfo/Idh/MocA family oxidoreductase"
     Region          <8..195
                     /region_name="GFO_IDH_MocA_C"
                     /note="Oxidoreductase family, C-terminal alpha/beta
                     domain; cl21649"
                     /db_xref="CDD:451345"
ORIGIN      
        1 rfvgpsyvlg dlathtlfla etmapqlkir rllcsrqsfv psrapledna yvlmeyhnga
       61 igsvwasavn cgsmhgqkvr ivgekaslew wdeqpnqlrf evqgepvrsl ergmpylaas
      121 aladdriggg haeglfeaws nlyrrfalam datdrrdaaf ladfwypdvq agalgvkwva
      181 rcvqsaetda gwvafd
//
LOCUS       WP_258057946             439 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein, partial [Serratia
            marcescens].
ACCESSION   WP_258057946
VERSION     WP_258057946.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 439)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         <1..439
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
     Region          1..439
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     Site            order(105..109,117,132,134..135,183..186,189,192..193,
                     208..210,243,342,344,370,408)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143430"
     Site            order(109,208,240,243)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143430"
ORIGIN      
        1 dravsaaraa fergdwaqaa paqrkatllr fadlmeqhhe elalletldt gkpirhslrd
       61 dvpgaircir wyaeaidkvy geiaptgrda lalierepig vvgaivpwnf plllacwklg
      121 palaagnsvv lkpsekspls aillgklaqq aglpdgvlnv vpgyghdagk alalhrdvda
      181 ltftgstlva kqlmiyages nmkrvwleag gksanivfad cpdldqaars aaagifynqg
      241 qvciagtrll veasiehafl qalrkhaaaf vpgdpldpat vmgtlidsgh cekvagyidr
      301 glsqgaalfl dgrdhpqgdh agylgptilt qvdnamsvar deifgpvlav tvfddeqqal
      361 qlandsdygl gaavwtrdla rahrmarqlk agtvfvnnyn dgdmtvpfgg ykqsgngrdk
      421 slhaldkfte lkttwisle
//
LOCUS       WP_258057969             216 aa            linear   BCT 02-MAR-2025
DEFINITION  efflux RND transporter permease subunit, partial [Serratia
            marcescens].
ACCESSION   WP_258057969
VERSION     WP_258057969.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 216)
  AUTHORS   Murakami,S., Nakashima,R., Yamashita,E. and Yamaguchi,A.
  TITLE     Crystal structure of bacterial multidrug efflux transporter AcrB
  JOURNAL   Nature 419 (6907), 587-593 (2002)
   PUBMED   12374972
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00873.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         <1..216
                     /product="efflux RND transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <1..209
                     /region_name="ACR_tran"
                     /note="AcrB/AcrD/AcrF family; cl47191"
                     /db_xref="CDD:481531"
ORIGIN      
        1 ggslsdataa vertmtqlgv pstvrgafag taqvfqdtlk sqlililaai atvyivlgvl
       61 yesyihplti lstlpsagvg allalelfga pfslialigi mlligivkkn aimmvdfale
      121 aqrnggisar eaifqasllr frpimmttla alfgalplvl trgdgaelrq plgitiaggl
      181 vmsqlltlyt tpvvylyfdr lqakfrrnkq laplph
//
LOCUS       WP_258058002             255 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Serratia
            marcescens].
ACCESSION   WP_258058002
VERSION     WP_258058002.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 255)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 255)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 255)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         <1..255
                     /product="ABC transporter substrate-binding protein"
     Region          <20..237
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(47..48,51,88)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238568"
ORIGIN      
        1 asgkrppapp taspapptae alllmrpdfv ysasyywlhs petpdrarla ewgigtylsp
       61 gacsgqqsai aaaltfedif telrelarif nvsrageali erlrgqlral epqraqlphw
      121 rllwwyagaq tpyvagccga pgllsrsvgs enlfgdlpel wptaswevia ardpdaivlg
      181 dlprggfgds aadkiafleh hpltatlrav rqrryvills ydmdpsartv aalgrlirgl
      241 aalppqaptl snkep
//
LOCUS       WP_258058022             176 aa            linear   BCT 02-MAR-2025
DEFINITION  thioesterase domain-containing protein, partial [Serratia
            marcescens].
ACCESSION   WP_258058022
VERSION     WP_258058022.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 176)
  AUTHORS   Schneider,A. and Marahiel,M.A.
  TITLE     Genetic evidence for a role of thioesterase domains, integrated in
            or associated with peptide synthetases, in non-ribosomal peptide
            biosynthesis in Bacillus subtilis
  JOURNAL   Arch Microbiol 169 (5), 404-410 (1998)
   PUBMED   9560421
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013166.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00975.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         <1..176
                     /product="thioesterase domain-containing protein"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          <1..175
                     /region_name="entF"
                     /note="enterobactin non-ribosomal peptide synthetase EntF;
                     PRK10252"
                     /db_xref="CDD:236668"
ORIGIN      
        1 tvlqvqphgp yhfigyslgg tlaqgiaarl qargeqvafl glldtyppet qnwdvmlddn
       61 vlkevqrere qflavsqdtl dpalgetrta mfdnieanya dsvrllshtr tarfhgqatl
      121 fvakrtlqag mdvqqtwsqy vdalqaheld cahvdivspa sfkvlgplln rilrtl
//
LOCUS       WP_258058047             306 aa            linear   BCT 02-MAR-2025
DEFINITION  amino acid permease, partial [Serratia marcescens].
ACCESSION   WP_258058047
VERSION     WP_258058047.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         <1..306
                     /product="amino acid permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <2..305
                     /region_name="2A0302"
                     /note="transporter, basic amino acid/polyamine antiporter
                     (APA) family; TIGR00905"
                     /db_xref="CDD:129983"
ORIGIN      
        1 aatlakllpl gmfavlaaia fkmdvftldf ngialgkpvw eqvkdtmlit lwvfigvega
       61 vvvsararnk kdvgratmla vlsalavylm vtllslgvvp rselaemrnp smavlmveli
      121 gpwgdvliaa glivsvcgay lswtimaaev pllaaqhgaf prvfgkqnrh hapssslwlt
      181 niavqlalvl iwltgsnyns lltiasemil vpyflvgafl fkvayrrrdk rlifaatgac
      241 vyglwllyas glmhllmsvl lyapgllvfm yarrghrdin llnrlekssi flllvatlpa
      301 gwfmlh
//
LOCUS       WP_258058058             269 aa            linear   BCT 02-MAR-2025
DEFINITION  group II intron maturase-specific domain-containing protein,
            partial [Streptococcus pneumoniae].
ACCESSION   WP_258058058
VERSION     WP_258058058.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 269)
  AUTHORS   Centron,D. and Roy,P.H.
  TITLE     Presence of a group II intron in a multiresistant Serratia
            marcescens strain that harbors three integrons and a novel gene
            fusion
  JOURNAL   Antimicrob Agents Chemother 46 (5), 1402-1409 (2002)
   PUBMED   11959575
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019984.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08388.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Streptococcus pneumoniae"
                     /db_xref="taxon:1313"
     Protein         <1..269
                     /product="group II intron maturase-specific
                     domain-containing protein"
     Region          <4..200
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            37
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238828"
ORIGIN      
        1 hniiedgdte slirkylhsg viingqrhkt lvgtpqggnl spllsnvmln eldkelekrg
       61 lrfvryaddc vitvgseaaa krvmysasrf iekrlglkvn mtkakitrpr elkylgfgfw
      121 kssdgwksrp hqdsvrrfkl klkkltqrkw sidltrrieq lnlsirgwin yfslgnmkri
      181 vasiderlrt rlrviiwkqw kkksrrlwgl lklgvpkwia dkvsgwgdhy qlvsqksvlk
      241 raiskpvlek rglvscldyy lerhalkvs
//
LOCUS       WP_258057963              77 aa            linear   BCT 02-MAR-2025
DEFINITION  FimD/PapC N-terminal domain-containing protein, partial [Serratia
            marcescens].
ACCESSION   WP_258057963
VERSION     WP_258057963.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 77)
  AUTHORS   Nishiyama,M., Horst,R., Eidam,O., Herrmann,T., Ignatov,O.,
            Vetsch,M., Bettendorff,P., Jelesarov,I., Grutter,M.G., Wuthrich,K.,
            Glockshuber,R. and Capitani,G.
  TITLE     Structural basis of chaperone-subunit complex recognition by the
            type 1 pilus assembly platform FimD
  JOURNAL   EMBO J 24 (12), 2075-2086 (2005)
   PUBMED   15920478
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025320.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13954.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         1..>77
                     /product="FimD/PapC N-terminal domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
     Region          40..>77
                     /region_name="PapC_N"
                     /note="PapC N-terminal domain; pfam13954"
                     /db_xref="CDD:433603"
ORIGIN      
        1 mitqkrilak rdawlkrial ftvttavcgn manpafsrdy fnpalletgr sgqqhvdlsi
       61 fengqqvpgt yrvdiwv
//
LOCUS       WP_258058082             178 aa            linear   BCT 02-MAR-2025
DEFINITION  M1 family aminopeptidase, partial [Streptococcus agalactiae].
ACCESSION   WP_258058082
VERSION     WP_258058082.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus agalactiae
  ORGANISM  Streptococcus agalactiae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 178)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01433.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Streptococcus agalactiae"
                     /db_xref="taxon:1311"
     Protein         <1..>178
                     /product="M1 family aminopeptidase"
                     /GO_function="GO:0008237 - metallopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
     Region          <1..112
                     /region_name="GluZincin"
                     /note="Gluzincin Peptidase family (thermolysin-like
                     proteinases, TLPs) which includes peptidases M1, M2, M3,
                     M4, M13, M32 and M36 (fungalysins); cl14813"
                     /db_xref="CDD:472708"
ORIGIN      
        1 atdfrtawvt fasrrkaway vqdqmptthp ivadivdlea arqnfdgity akgasvlkql
       61 aayvgrdafl daahryfaah awgnasladf maxleaasgr dmrawadawl htsgvprlrv
      121 dvdgdapvlr qegadpvtgg pilrphvlkv gxftpgqdgv lrrtaqvtad vpggaega
//
LOCUS       WP_258057967             139 aa            linear   BCT 02-MAR-2025
DEFINITION  bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine
            kinase, partial [Serratia marcescens].
ACCESSION   WP_258057967
VERSION     WP_258057967.1
KEYWORDS    RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 139)
  AUTHORS   Petersen,L.A. and Downs,D.M.
  TITLE     Identification and characterization of an operon in Salmonella
            typhimurium involved in thiamine biosynthesis
  JOURNAL   J Bacteriol 179 (15), 4894-4900 (1997)
   PUBMED   9244280
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020132.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08543.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Serratia marcescens"
                     /db_xref="taxon:615"
     Protein         <1..139
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
     Region          <27..139
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
     Site            order(49,81,84..85,88)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238574"
ORIGIN      
        1 tcssalvstt pnlpeaaall acapaedeaq mreqgralla mgcravlmkg ghlsesespd
       61 wlftaegeqr ftaprvatrh thgtgctlsa alaalrprhd dwaatvaaak dylqqalqqa
      121 dtlevghgig pvhhfhaww
//
LOCUS       WP_258058085             153 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Streptococcus agalactiae].
ACCESSION   WP_258058085
VERSION     WP_258058085.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus agalactiae
  ORGANISM  Streptococcus agalactiae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Streptococcus agalactiae"
                     /db_xref="taxon:1311"
     Protein         <1..>153
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          <1..>153
                     /region_name="PRK07561"
                     /note="DNA topoisomerase I subunit omega; Validated"
                     /db_xref="CDD:236048"
ORIGIN      
        1 gyitymrtds vnlsqeavqa arrqatelyg adavpaqprv yakrnetaqe aheairpagd
       61 sfrtpaqvka elrpdefrly eliwkrtvas qmadakgyta tlrlsaxaqd grlaqfsasg
      121 tvitfkgfld ayeegrdaev dgenaeakdr rlp
//
LOCUS       WP_258058090             124 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein, partial [Streptococcus agalactiae].
ACCESSION   WP_258058090
VERSION     WP_258058090.1
KEYWORDS    RefSeq.
SOURCE      Streptococcus agalactiae
  ORGANISM  Streptococcus agalactiae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Streptococcus agalactiae"
                     /db_xref="taxon:1311"
     Protein         <1..>124
                     /product="helicase-related protein"
     Region          <3..>124
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
ORIGIN      
        1 taarahaeal dadptvdalv fxpgvaevea vagrxaalap dtevrvlhgr qepadqdaal
       61 agradpavpr vvvatavaes sltvpgvrlv xdsglarepr rdrgrgmagl vtvqasraaa
      121 gqra
//
LOCUS       WP_258058122             233 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein, partial [Staphylococcus
            pseudintermedius].
ACCESSION   WP_258058122
VERSION     WP_258058122.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus intermedius
            group.
REFERENCE   1  (residues 1 to 233)
  AUTHORS   Aravind,L., Leipe,D.D. and Koonin,E.V.
  TITLE     Toprim--a conserved catalytic domain in type IA and II
            topoisomerases, DnaG-type primases, OLD family nucleases and RecR
            proteins
  JOURNAL   Nucleic Acids Res 26 (18), 4205-4213 (1998)
   PUBMED   9722641
REFERENCE   2  (residues 1 to 233)
  AUTHORS   Szafranski,P., Smith,C.L. and Cantor,C.R.
  TITLE     Cloning and analysis of the dnaG gene encoding Pseudomonas putida
            DNA primase
  JOURNAL   Biochim Biophys Acta 1352 (3), 243-248 (1997)
   PUBMED   9224947
REFERENCE   3  (residues 1 to 233)
  AUTHORS   Bergerat,A., de Massy,B., Gadelle,D., Varoutas,P.C., Nicolas,A. and
            Forterre,P.
  TITLE     An atypical topoisomerase II from Archaea with implications for
            meiotic recombination
  JOURNAL   Nature 386 (6623), 414-417 (1997)
   PUBMED   9121560
REFERENCE   4  (residues 1 to 233)
  AUTHORS   Versalovic,J. and Lupski,J.R.
  TITLE     The Haemophilus influenzae dnaG sequence and conserved bacterial
            primase motifs
  JOURNAL   Gene 136 (1-2), 281-286 (1993)
   PUBMED   8294018
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013878.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01751.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Staphylococcus pseudintermedius"
                     /db_xref="taxon:283734"
     Protein         <1..233
                     /product="toprim domain-containing protein"
     Region          <1..211
                     /region_name="GyrB"
                     /note="DNA gyrase/topoisomerase IV, subunit B
                     [Replication, recombination and repair]; COG0187"
                     /db_xref="CDD:439957"
ORIGIN      
        1 gdsaggsakl grdrkfqail plrgkvinte karledifkn eeintiihti gagvgndfnl
       61 kdsnynriii mtdadtdgah iqvllltfff kymrplvmag rvyialpply klekgkgknk
      121 kiayawtdee leklqremgk gfvlqrykgl gemnpdqlwe ttmnpetrtl irvqiddevr
      181 ssqrvstlmg dkvaprrewi erhvqfgmqe dlsileneei qilsdddiae eda
//
LOCUS       WP_258058178             283 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF234 domain-containing protein [Campylobacter hyointestinalis].
ACCESSION   WP_258058178
VERSION     WP_258058178.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter hyointestinalis
  ORGANISM  Campylobacter hyointestinalis
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014999.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03008.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Campylobacter hyointestinalis"
                     /db_xref="taxon:198"
     Protein         1..283
                     /product="DUF234 domain-containing protein"
                     /calculated_mol_wt=33414
     Region          <31..151
                     /region_name="COG1672"
                     /note="Predicted ATPase, archaeal AAA+ ATPase superfamily
                     [General function prediction only]"
                     /db_xref="CDD:441278"
     Region          140..223
                     /region_name="DUF4143"
                     /note="Domain of unknown function (DUF4143); cl24018"
                     /db_xref="CDD:474127"
ORIGIN      
        1 mensfddski qsllefyfvf dnctlskdfs difeaiqkhi ldryeelser fkfssydkei
       61 kimlkklars drkrfnisks lprklasiii ktlqnngile iekskeikpk sskhqkikke
      121 lrryqvqdki hfksnfarfw frycepnlel lkdaktdqvl diikndflly cslpfelasi
      181 kllshhlnip selissywnk kdeidifidh egfiivgevk ykdrkicknv lnilkakcqn
      241 adikpnlivl fsksgfsnel lslkddkill fglehfkeil wns
//
LOCUS       WP_258058182             222 aa            linear   BCT 02-MAR-2025
DEFINITION  formyltransferase family protein [Campylobacter hyointestinalis].
ACCESSION   WP_258058182
VERSION     WP_258058182.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter hyointestinalis
  ORGANISM  Campylobacter hyointestinalis
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 222)
  AUTHORS   Chen,P., Schulze-Gahmen,U., Stura,E.A., Inglese,J., Johnson,D.L.,
            Marolewski,A., Benkovic,S.J. and Wilson,I.A.
  TITLE     Crystal structure of glycinamide ribonucleotide transformylase from
            Escherichia coli at 3.0 A resolution. A target enzyme for
            chemotherapy
  JOURNAL   J Mol Biol 227 (1), 283-292 (1992)
   PUBMED   1522592
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012760.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00551.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Campylobacter hyointestinalis"
                     /db_xref="taxon:198"
     Protein         1..222
                     /product="formyltransferase family protein"
                     /GO_function="GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=24653
     Region          2..177
                     /region_name="FMT_core_like_4"
                     /note="Formyl transferase catalytic core domain found in a
                     group of proteins with unknown functions; cd08651"
                     /db_xref="CDD:187720"
     Site            order(7,14..16,80..87,92,99..102,110,130,132..133,
                     136..137)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:187720"
     Site            order(14..15,81..82,100,102,166)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:187720"
     Site            order(80,83,85..87,92,99,132..133,136..137)
                     /site_type="other"
                     /note="putative cosubstrate binding site"
                     /db_xref="CDD:187720"
     Site            order(99,101,137)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:187720"
ORIGIN      
        1 mriifigavq fsksaleklv eiganivgvc tkenskfnsd fadltplcna nkipykyvdd
       61 insneniewi kslkpdiifc fgwsslikke llnlcpivgy hparlpqnrg rhpliwalal
      121 gldssastff fmdegadsgd ilsqqefnis yhdtartlyd kvisialgqi srftdqiskl
      181 yfanlqnggg matllkmlys qfpsnkttpk qtlgeregvl ma
//
LOCUS       WP_258058224             187 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-binding dehydrogenase [Campylobacter hyointestinalis].
ACCESSION   WP_258058224
VERSION     WP_258058224.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter hyointestinalis
  ORGANISM  Campylobacter hyointestinalis
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00107.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Campylobacter hyointestinalis"
                     /db_xref="taxon:198"
     Protein         1..187
                     /product="zinc-binding dehydrogenase"
                     /calculated_mol_wt=20399
     Region          <2..183
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
ORIGIN      
        1 mttysplmky kikkgdkvgv agigglghma vkiaiskgae viaftttadk vkdilsfgak
       61 evvvvdnlsk leaynqkldy mistipaqfd iaayascvkp fgtftqvgmp pkfeltlqnl
      121 glaatrvnft asligdmret qdvvdycakn kiypnieiid akeindawkk vlskearyry
      181 vidsati
//
LOCUS       WP_258058249             380 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-ketoacyl synthase N-terminal-like domain-containing protein
            [Campylobacter hyointestinalis].
ACCESSION   WP_258058249
VERSION     WP_258058249.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter hyointestinalis
  ORGANISM  Campylobacter hyointestinalis
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 380)
  AUTHORS   Huang,W., Jia,J., Edwards,P., Dehesh,K., Schneider,G. and
            Lindqvist,Y.
  TITLE     Crystal structure of beta-ketoacyl-acyl carrier protein synthase II
            from E.coli reveals the molecular architecture of condensing
            enzymes
  JOURNAL   EMBO J 17 (5), 1183-1191 (1998)
   PUBMED   9482715
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012337.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00109.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Campylobacter hyointestinalis"
                     /db_xref="taxon:198"
     Protein         1..380
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /calculated_mol_wt=40815
     Region          61..380
                     /region_name="cond_enzymes"
                     /note="Condensing enzymes; Family of enzymes that catalyze
                     a (decarboxylating or non-decarboxylating) Claisen-like
                     condensation reaction. Members are share strong structural
                     similarity, and are involved in the synthesis and
                     degradation of fatty acids, and the...; cl09938"
                     /db_xref="CDD:447866"
     Site            order(151,308)
                     /site_type="active"
                     /db_xref="CDD:238430"
ORIGIN      
        1 mnifmskpsi issagdenal lrditeckks lqslefnekn fmvgrikdel ldlkfisnpt
       61 fatrtnaial sailplenqv kklvkkygke nigvivgttt tgveenyktf rngifnekef
      121 dfdrnslanp akfiknffgl ggvaysista ctsgikaise aadlvragic kaviaggads
      181 lntltlfgfn slsilsddmc dpfskdrkgt nlgegaafmi igdeevgevc iksyasnsda
      241 fhmtsprddg fyqtmlinea lqkanlndvd yvnlhatati andmmeanav fasktnapcs
      301 gikqfighcl gaagaiesgv csmligdkka lplqviksdi dpvlkplnlv inkqtldikn
      361 tmslsfafgg dnaciilgrk
//
LOCUS       WP_258058314             236 aa            linear   BCT 02-MAR-2025
DEFINITION  glucosaminidase domain-containing protein [Campylobacter
            hyointestinalis].
ACCESSION   WP_258058314
VERSION     WP_258058314.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter hyointestinalis
  ORGANISM  Campylobacter hyointestinalis
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 236)
  AUTHORS   Nambu,T., Minamino,T., Macnab,R.M. and Kutsukake,K.
  TITLE     Peptidoglycan-hydrolyzing activity of the FlgJ protein, essential
            for flagellar rod formation in Salmonella typhimurium
  JOURNAL   J Bacteriol 181 (5), 1555-1561 (1999)
   PUBMED   10049388
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013954.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01832.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Campylobacter hyointestinalis"
                     /db_xref="taxon:198"
     Protein         1..236
                     /product="glucosaminidase domain-containing protein"
                     /GO_function="GO:0004040 - amidase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=27294
     Region          3..235
                     /region_name="Bax"
                     /note="Uncharacterized FlgJ-related protein [General
                     function prediction only]; cl27488"
                     /db_xref="CDD:474928"
ORIGIN      
        1 mirrfikfll ilvacelfgg leqsyyklsi keqkeefski isqmvqdsnq ntlrsrefal
       61 nyinliykks frdldlsnld kllsiaktyk iqkifdpney iskldaipis laiaqaaves
      121 gwgksrfake annfyghwtw ggkglvplnr denkthkiki fdspsaavda yvlnlnshpa
      181 yskfreirlk frkddliytg ldaaktmesy sqmgeiyvkq lektiklydl tkfdri
//
LOCUS       WP_258058322             283 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF234 domain-containing protein [Campylobacter hyointestinalis].
ACCESSION   WP_258058322
VERSION     WP_258058322.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter hyointestinalis
  ORGANISM  Campylobacter hyointestinalis
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014999.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03008.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Campylobacter hyointestinalis"
                     /db_xref="taxon:198"
     Protein         1..283
                     /product="DUF234 domain-containing protein"
                     /calculated_mol_wt=33365
     Region          <31..151
                     /region_name="COG1672"
                     /note="Predicted ATPase, archaeal AAA+ ATPase superfamily
                     [General function prediction only]"
                     /db_xref="CDD:441278"
     Region          140..223
                     /region_name="DUF4143"
                     /note="Domain of unknown function (DUF4143); cl24018"
                     /db_xref="CDD:474127"
ORIGIN      
        1 mensfddski qsllefyfvf dncalskdfs difeaiqkhi ldryeelser fkfssydkei
       61 kimlkklars drkcfnisks lprklasiii ktlqnngile iekskeikpk sskhqkikke
      121 lrryqvqdki hfksnfarfw frycepnlel lkdaktdqvl diikndflly cslpfelasi
      181 kllshhlnip selissywnk kdeidifidh egfiivgevk ykdrkicknv lnilkakcqn
      241 adikpnlivl fsksgfsnel lslkddkilf fglehfkeil wns
//
LOCUS       WP_258058352             211 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein, partial [Campylobacter
            hyointestinalis].
ACCESSION   WP_258058352
VERSION     WP_258058352.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter hyointestinalis
  ORGANISM  Campylobacter hyointestinalis
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 211)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Campylobacter hyointestinalis"
                     /db_xref="taxon:198"
     Protein         <1..211
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
     Site            order(19..20,23..24,27,30..31,33..34,37,40..41,44,47..48,
                     51..52,55,58..59,61..62,66,68..69,72,82..83,86..87,90,93,
                     96..97,100,104,107,114,118,121,124..125,128,131..132,
                     135..136,138..139,142..143,156..157,163,166..167,170,
                     173..174,176..177,180..181,184,187..188,191,194..195,
                     197..198)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Region          22..>200
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            96..129
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 evekvtnllg neitkmlsdn laqannleek anslktlvds lntstksqsd slqesaaave
       61 emsssmeain ertaevikqs edikniitii rdiadqtnll alnaaieaar agehgrgfav
      121 vadevrklae rtqkslgeie anvnilsqsi nevsqsineq teainqishs vvsvdeltkq
      181 nvtiasdtnr vtkeiegiad iivnevkkkk f
//
LOCUS       WP_258058354             204 aa            linear   BCT 02-MAR-2025
DEFINITION  relaxase/mobilization nuclease domain-containing protein, partial
            [Campylobacter hyointestinalis].
ACCESSION   WP_258058354
VERSION     WP_258058354.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter hyointestinalis
  ORGANISM  Campylobacter hyointestinalis
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 204)
  AUTHORS   Meyer,R.
  TITLE     Identification of the mob genes of plasmid pSC101 and
            characterization of a hybrid pSC101-R1162 system for conjugal
            mobilization
  JOURNAL   J Bacteriol 182 (17), 4875-4881 (2000)
   PUBMED   10940031
REFERENCE   2  (residues 1 to 204)
  AUTHORS   Bravo-Angel,A.M., Gloeckler,V., Hohn,B. and Tinland,B.
  TITLE     Bacterial conjugation protein MobA mediates integration of complex
            DNA structures into plant cells
  JOURNAL   J Bacteriol 181 (18), 5758-5765 (1999)
   PUBMED   10482518
REFERENCE   3  (residues 1 to 204)
  AUTHORS   Byrd,D.R. and Matson,S.W.
  TITLE     Nicking by transesterification: the reaction catalysed by a
            relaxase
  JOURNAL   Mol Microbiol 25 (6), 1011-1022 (1997)
   PUBMED   9350859
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015397.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03432.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Campylobacter hyointestinalis"
                     /db_xref="taxon:198"
     Protein         <1..204
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
     Region          63..>168
                     /region_name="Relaxase"
                     /note="Relaxase/mobilization nuclease domain; cl21589"
                     /db_xref="CDD:451322"
ORIGIN      
        1 ssidwdkyfd dlkairvgrt kfiksehkni sfasggysrn hftfsnnpka kqsvvkmisn
       61 lpktsikkci dyalknsldg yainekgerv gsdevmaews kdfgknlnsk dawhlmfsik
      121 escsdkqklk aleqsvksvl gtnfaghkya fvmhthqnnp hmhvvlnkki ilpvrkftli
      181 vvrrlknfli mqemhllmlc rlvv
//
LOCUS       WP_258058382             169 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Campylobacter hyointestinalis].
ACCESSION   WP_258058382
VERSION     WP_258058382.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter hyointestinalis
  ORGANISM  Campylobacter hyointestinalis
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024868.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13477.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Campylobacter hyointestinalis"
                     /db_xref="taxon:198"
     Protein         1..169
                     /product="glycosyltransferase"
                     /calculated_mol_wt=19504
     Region          3..>163
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mskiiiisnt swsiynfrfn latalidngy evaivapkdr ytsklnqkfn vynvdidsng
       61 inpikdikti felyklykql kpdivlnfti kpniysslic rylkipcisn itglgtifik
      121 qnfitkiakf lykialnknk siffqndddk klflkynlis qknnidvlp
//
LOCUS       WP_258058384             257 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4910 domain-containing protein [Campylobacter hyointestinalis].
ACCESSION   WP_258058384
VERSION     WP_258058384.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter hyointestinalis
  ORGANISM  Campylobacter hyointestinalis
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16254.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Campylobacter hyointestinalis"
                     /db_xref="taxon:198"
     Protein         1..257
                     /product="DUF4910 domain-containing protein"
                     /calculated_mol_wt=29562
     Region          8..>251
                     /region_name="COG4310"
                     /note="Uncharacterized conserved protein, cotains an
                     aminopeptidase-like domain [General function prediction
                     only]"
                     /db_xref="CDD:443451"
ORIGIN      
        1 midytqklds ylkklfplnr sitgdanrqt lkilqdivpl nileyksger aydwvipdew
       61 nvreawikns kgekvidfkk snlhlvgysi plhkknmkln efksnlhflq nlpnaipyrt
      121 syynknwgfc lsyndftkyf ndneeyeifi ntefkkgsls vgellipgkt kqeyliscyi
      181 chpsmandsl sgilvsafla kellknqskl ehsyrfifvp etigaityca kneasmkrik
      241 nalvittcgg gvrrlgl
//
LOCUS       WP_258058425             260 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Campylobacter hyointestinalis].
ACCESSION   WP_258058425
VERSION     WP_258058425.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter hyointestinalis
  ORGANISM  Campylobacter hyointestinalis
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Campylobacter hyointestinalis"
                     /db_xref="taxon:198"
     Protein         1..260
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=28606
     Region          3..>259
                     /region_name="TlcC"
                     /note="ATP/ADP translocase [Energy production and
                     conversion]; COG3202"
                     /db_xref="CDD:442435"
ORIGIN      
        1 mslnqilslk kgegkfllia vlfifslfas ysllrpirea lgisggtgel kwlflgtfia
       61 tivgsilami lsgmikrkly tdfiygffal nligffallh qisqgseayl ivarsfyiwv
      121 svfnifvist awslladvfs kersarlfgi isagaslggi fgaffvsvls kfidvpsfif
      181 isiiclgisi vlknllikea fgletlnlqs gfvsikdrfd kpigsknpfv gffliiksry
      241 llallgfill ltsvstflym
//
LOCUS       WP_258058444             193 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Campylobacter hyointestinalis].
ACCESSION   WP_258058444
VERSION     WP_258058444.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter hyointestinalis
  ORGANISM  Campylobacter hyointestinalis
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 193)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 193)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 193)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 193)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Campylobacter hyointestinalis"
                     /db_xref="taxon:198"
     Protein         1..193
                     /product="ATP-binding protein"
                     /calculated_mol_wt=22081
     Region          <3..185
                     /region_name="COG4191"
                     /note="Signal transduction histidine kinase regulating
                     C4-dicarboxylate transport system [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443345"
ORIGIN      
        1 mnklsdeify dniarslqni dymsktmnmf knfykiekdv qefniqkain dticvlfpvk
       61 stidikvtva kgvipmckny inefkqitac liqnskqilq nsknkkrtri vvnikqtqth
      121 fiirvidngd giaqnfkdnv ftpfmstkgs sglglyiskl iankkcggdl yvsryknpti
      181 ftltilkkvr ddr
//
LOCUS       WP_258058446             101 aa            linear   BCT 02-MAR-2025
DEFINITION  phage integrase central domain-containing protein [Campylobacter
            hyointestinalis].
ACCESSION   WP_258058446
VERSION     WP_258058446.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter hyointestinalis
  ORGANISM  Campylobacter hyointestinalis
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 101)
  AUTHORS   Laxmikanthan,G., Xu,C., Brilot,A.F., Warren,D., Steele,L., Seah,N.,
            Tong,W., Grigorieff,N., Landy,A. and Van Duyne,G.D.
  TITLE     Structure of a Holliday junction complex reveals mechanisms
            governing a highly regulated DNA transaction
  JOURNAL   Elife 5, e14313 (2016)
   PUBMED   27223329
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 101)
  AUTHORS   Kamadurai,H.B., Jain,R. and Foster,M.P.
  TITLE     Crystallization and structure determination of the core-binding
            domain of bacteriophage lambda integrase
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 64 (Pt 6), 470-473
            (2008)
   PUBMED   18540053
REFERENCE   3  (residues 1 to 101)
  AUTHORS   Biswas,T., Aihara,H., Radman-Livaja,M., Filman,D., Landy,A. and
            Ellenberger,T.
  TITLE     A structural basis for allosteric control of DNA recombination by
            lambda integrase
  JOURNAL   Nature 435 (7045), 1059-1066 (2005)
   PUBMED   15973401
REFERENCE   4  (residues 1 to 101)
  AUTHORS   Aihara,H., Kwon,H.J., Nunes-Duby,S.E., Landy,A. and Ellenberger,T.
  TITLE     A conformational switch controls the DNA cleavage activity of
            lambda integrase
  JOURNAL   Mol Cell 12 (1), 187-198 (2003)
   PUBMED   12887904
  REMARK    Erratum:[Mol Cell. 2003 Sep;12(3):793]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047080.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22022.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Campylobacter hyointestinalis"
                     /db_xref="taxon:198"
     Protein         1..101
                     /product="phage integrase central domain-containing
                     protein"
                     /calculated_mol_wt=11670
ORIGIN      
        1 mveharadal kivkrikhss vlksnkysig alfdsyikqk qatltlnytq kiinqmqtyi
       61 lprfentdia nikfshlkev ldplfnpytp kqsrletkyi v
//
LOCUS       WP_258058458             172 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Campylobacter hyointestinalis].
ACCESSION   WP_258058458
VERSION     WP_258058458.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter hyointestinalis
  ORGANISM  Campylobacter hyointestinalis
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Campylobacter hyointestinalis"
                     /db_xref="taxon:198"
     Protein         1..172
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=18704
     Region          3..>172
                     /region_name="TlcC"
                     /note="ATP/ADP translocase [Energy production and
                     conversion]; COG3202"
                     /db_xref="CDD:442435"
ORIGIN      
        1 mslnqilslk kgegkfllia vlfifslfas ysllrpirea lgisggtgel kwlflgtfia
       61 tivgsilami lsgmikrkly tdfiygffal nligffallh qisqgseays ivarsfyiwv
      121 svfnifvist awslladvfs kersarlfgi isagaslggi fgaffvsvls nl
//
LOCUS       WP_258058483             257 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin dinucleotide binding domain-containing protein
            [Campylobacter hyointestinalis].
ACCESSION   WP_258058483
VERSION     WP_258058483.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter hyointestinalis
  ORGANISM  Campylobacter hyointestinalis
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 257)
  AUTHORS   Hochheimer,A., Hedderich,R. and Thauer,R.K.
  TITLE     The formylmethanofuran dehydrogenase isoenzymes in Methanobacterium
            wolfei and Methanobacterium thermoautotrophicum: induction of the
            molybdenum isoenzyme by molybdate and constitutive synthesis of the
            tungsten isoenzyme
  JOURNAL   Arch Microbiol 170 (5), 389-393 (1998)
   PUBMED   9818358
REFERENCE   2  (residues 1 to 257)
  AUTHORS   Schneider,F., Lowe,J., Huber,R., Schindelin,H., Kisker,C. and
            Knablein,J.
  TITLE     Crystal structure of dimethyl sulfoxide reductase from Rhodobacter
            capsulatus at 1.88 A resolution
  JOURNAL   J Mol Biol 263 (1), 53-69 (1996)
   PUBMED   8890912
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013717.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01568.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Campylobacter hyointestinalis"
                     /db_xref="taxon:198"
     Protein         1..257
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /calculated_mol_wt=29611
     Region          <2..253
                     /region_name="PRK15102"
                     /note="trimethylamine-N-oxide reductase TorA"
                     /db_xref="CDD:237909"
ORIGIN      
        1 madivlpacs tlerndiamg gvhgkngvya mkkaieplye sksdleifsl lamrfgkkvy
       61 dkftdekpne mdkikyeydi sptaqlmsfe kfweqgyiel prneesykfv rhakfrndpv
      121 anklatisgk iqitvpkfse lkykdfsryp twiepdewlg dknrkyplhl lsphpsyrvh
      181 sqgdntylrs fykindrepv minpddakky gishgdvvei yndrgrvlag afvtenirqg
      241 vmalqegawy apenttd
//
LOCUS       WP_258058484             293 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase [Campylobacter hyointestinalis].
ACCESSION   WP_258058484
VERSION     WP_258058484.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter hyointestinalis
  ORGANISM  Campylobacter hyointestinalis
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 293)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 293)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Campylobacter hyointestinalis"
                     /db_xref="taxon:198"
     Protein         1..293
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=33227
     Region          36..284
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     Site            order(50..52,73,78,103,135,163..164,185,209..215,237,
                     252..255,260,263..264)
                     /site_type="active"
                     /db_xref="CDD:381359"
     Site            order(73,78,103,135)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381359"
ORIGIN      
        1 mqtrrefisn lvkfsgglal mnsnlfatnk pqipsvnlnn gvkmpilgyg tydlsdttkc
       61 vldalsvgyr lidtaqmygn eeevgealrm skvplhelfi ttklsqnmsy ketlksvnva
      121 lkklkleyid lllihgaysd skqmykamee lyengilrai gisnfttkky vdfvkdvkit
      181 pminqmethv ffmqkelrav mkdtsleawn pfangkngyf snlvldgiak khgkniaqig
      241 lryliqngii aipkttkksr mienidifdf slddedltki shldtnkslf ewy
//
LOCUS       WP_258058514             102 aa            linear   BCT 02-MAR-2025
DEFINITION  cysteine peptidase family C39 domain-containing protein, partial
            [Campylobacter hyointestinalis].
ACCESSION   WP_258058514
VERSION     WP_258058514.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter hyointestinalis
  ORGANISM  Campylobacter hyointestinalis
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 102)
  AUTHORS   Havarstein,L.S., Diep,D.B. and Nes,I.F.
  TITLE     A family of bacteriocin ABC transporters carry out proteolytic
            processing of their substrates concomitant with export
  JOURNAL   Mol Microbiol 16 (2), 229-240 (1995)
   PUBMED   7565085
REFERENCE   2  (residues 1 to 102)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015377.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03412.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Campylobacter hyointestinalis"
                     /db_xref="taxon:198"
     Protein         1..>102
                     /product="cysteine peptidase family C39 domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          1..>102
                     /region_name="C39G"
                     /note="Predicted double-glycine leader peptidase, C39-like
                     (CLD) domain [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3271"
                     /db_xref="CDD:442502"
ORIGIN      
        1 mekilkillf lpilalstka ewvvksyqei knervirqty eqscgassla tllnilddqk
       61 kfdelellki msgqelytdm vsfadlndav kklgfqsnsy qi
//
LOCUS       WP_258058511             767 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Campylobacter hyointestinalis].
ACCESSION   WP_258058511
VERSION     WP_258058511.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter hyointestinalis
  ORGANISM  Campylobacter hyointestinalis
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Campylobacter hyointestinalis"
                     /db_xref="taxon:198"
     Protein         1..767
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=87951
     Region          16..374
                     /region_name="GT4_CapM-like"
                     /note="capsular polysaccharide biosynthesis
                     glycosyltransferase CapM and similar proteins; cd03808"
                     /db_xref="CDD:340837"
     Site            order(42,207..209,272,294)
                     /site_type="other"
                     /note="putative ADP-binding pocket [chemical binding]"
                     /db_xref="CDD:340837"
     Region          394..747
                     /region_name="GT4_GT28_WabH-like"
                     /note="family 4 and family 28 glycosyltransferases similar
                     to Klebsiella WabH; cd03811"
                     /db_xref="CDD:340839"
     Site            order(404,589..591,646,668)
                     /site_type="other"
                     /note="putative ADP-binding pocket [chemical binding]"
                     /db_xref="CDD:340839"
ORIGIN      
        1 maywfkfdpg vyilskiiii sntswsiynf rfnlatalid ngyevaivap kdrytsklnq
       61 kfnvynvdid snginpikdi ktifelykly kqlkpdivln ftikpniyss licrylkipc
      121 isnitglgti fikqnfitki akflykialn knksiffqnd ddkklflkyn lisqknnidv
      181 lpgsgvdldk fkpspkvdnd kfiflfigrl irdkgiseli easimlgaky dnfkiwllge
      241 lgvqnntais qdelngwlkn dfieylgttd nvadiiaksd cvvlpsyreg tprslleaaa
      301 makpiittnt vgcrdvvsdg ingllcevrn akdlagkmek mlnssteqqr lwggvgreki
      361 iqkydekfii ykyllhikni qnynlenykm kkaaflinsl egggaervvs tilnnfveky
      421 ecylilmqsg ifyeldkrin iiyldksens lglfkflklp ilayklakii kkykfehivs
      481 flyranyinv lsnlfvkhkt iinecsmpsm rcknggrlng minkflikml ypkadwclsn
      541 syvnmmdlkn nfdvnkigyi ynplnigmie klsknsiqih ktrftfvtvg rliesknhkl
      601 iieairdfna dlwiigdgcl kqelqsfiks cdlndkvhll gskenpfsfl skadcfifgs
      661 nyegfpnvlv ealacglpii stdcqsgpre llspssdvnf ylkdkielaq ygilipikni
      721 ekmkeaiksi mnddvlrqsy kekarqrand frveksikly eeiiffn
//
LOCUS       WP_258058551             419 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4910 domain-containing protein [Campylobacter hyointestinalis].
ACCESSION   WP_258058551
VERSION     WP_258058551.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter hyointestinalis
  ORGANISM  Campylobacter hyointestinalis
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16254.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Campylobacter hyointestinalis"
                     /db_xref="taxon:198"
     Protein         1..419
                     /product="DUF4910 domain-containing protein"
                     /calculated_mol_wt=48058
     Region          1..411
                     /region_name="COG4310"
                     /note="Uncharacterized conserved protein, cotains an
                     aminopeptidase-like domain [General function prediction
                     only]"
                     /db_xref="CDD:443451"
ORIGIN      
        1 mkeladklyn lprdlvsdgy daainaiknk fksikihsyp sgtqaftwiv perwichnag
       61 lydtqgneif stkqnglhvm ryslpldkev srkelfdhly tpgkwandqk navayafkfy
      121 erdwglccsn eqksrlnder yrvkidsvss ygelkvgewh iqgkssktii lcahldhpyq
      181 fnddlsgvia glkvmeslak hkelrysykl lllpetigsa cylshnekec kdiiggifle
      241 vlatnhqlhl mhsntpdsyf dtiatllfkq nglsignfva pgqllnderm fnalnipmis
      301 iqrigknnty ypqyhtdqdt pknanfknld laikfilnli divendamfi rnfkgelfvs
      361 siddleyskd sryireltfc neqnlsqiav kknldfkell rvaqilkran lasledvki
//
LOCUS       WP_258058558             754 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Campylobacter hyointestinalis].
ACCESSION   WP_258058558
VERSION     WP_258058558.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter hyointestinalis
  ORGANISM  Campylobacter hyointestinalis
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Campylobacter hyointestinalis"
                     /db_xref="taxon:198"
     Protein         1..754
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=86350
     Region          3..361
                     /region_name="GT4_CapM-like"
                     /note="capsular polysaccharide biosynthesis
                     glycosyltransferase CapM and similar proteins; cd03808"
                     /db_xref="CDD:340837"
     Site            order(29,194..196,259,281)
                     /site_type="other"
                     /note="putative ADP-binding pocket [chemical binding]"
                     /db_xref="CDD:340837"
     Region          381..734
                     /region_name="GT4_GT28_WabH-like"
                     /note="family 4 and family 28 glycosyltransferases similar
                     to Klebsiella WabH; cd03811"
                     /db_xref="CDD:340839"
     Site            order(391,576..578,633,655)
                     /site_type="other"
                     /note="putative ADP-binding pocket [chemical binding]"
                     /db_xref="CDD:340839"
ORIGIN      
        1 mskiiiisnt swsiynfrfn latalidngy evaivapkdr ytsklnqkfn vynvdidsng
       61 inpikdikti felyklykql kpdivlnfti kpniysslic rylkipcisn itglgtifik
      121 qnfitkiakf lykialnknk siffqndddk klflkynlis qknnidvlpg sgvdldkfkp
      181 spkvdndkfi flfigrlird kgiselieas imlgakydnf kiwllgelgv qnntaisqde
      241 lngwlkndfi eylgttdnva diiaksdcvv lpsyregtpr slleaaamak piittntvgc
      301 rdvvsdging llcevrnakd lagkmekmln ssteqqrlwg gvgrekiiqk ydekfiiyky
      361 llhikniqny nlenykmkka aflinslegg gaervvstil nnfvekyecy lilmqsgify
      421 eldkriniiy ldksenslgl fkflklpila yklakiikky kfehivsfly ranyinvlsn
      481 lfvkhktiin ecsmpsmrck nggrlngmin kflikmlypk adwclsnsyv nmmdlknnfd
      541 vnkigyiynp lnigmiekls knsiqihktr ftfvtvgrli esknhkliie airdfnadlw
      601 iigdgclkqe lqsfikscdl ndkvhllgsk enpfsflska dcfifgsnye gfpnvlveal
      661 acglpiistd cqsgprells pssdvnfylk dkielaqygi lipikniekm keaiksimnd
      721 dvlrqsykek arqrandfrv eksiklyeei iffn
//
LOCUS       WP_258058424             164 aa            linear   BCT 02-MAR-2025
DEFINITION  Npt1/Npt2 family nucleotide transporter [Campylobacter
            hyointestinalis].
ACCESSION   WP_258058424
VERSION     WP_258058424.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter hyointestinalis
  ORGANISM  Campylobacter hyointestinalis
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 164)
  AUTHORS   Tjaden,J., Winkler,H.H., Schwoppe,C., Van Der Laan,M., Mohlmann,T.
            and Neuhaus,H.E.
  TITLE     Two nucleotide transport proteins in Chlamydia trachomatis, one for
            net nucleoside triphosphate uptake and the other for transport of
            energy
  JOURNAL   J Bacteriol 181 (4), 1196-1202 (1999)
   PUBMED   9973346
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015194.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03219.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Campylobacter hyointestinalis"
                     /db_xref="taxon:198"
     Protein         1..164
                     /product="Npt1/Npt2 family nucleotide transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005471 - ATP:ADP antiporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0006862 - nucleotide transport [Evidence
                     IEA]"
                     /calculated_mol_wt=18155
     Region          <2..156
                     /region_name="TlcC"
                     /note="ATP/ADP translocase [Energy production and
                     conversion]; COG3202"
                     /db_xref="CDD:442435"
ORIGIN      
        1 mfesrearaa vfanidfivq lssfaiqifi tskivqffgi kwllgtlgfv valgfvllaf
       61 ypvfgvlvlv msirrvgeya lvkpgremlf vpldsqskyk vknfldtvvy ragdsmsaal
      121 egaiakisit avlfvgtlis fiwgslgvyl gkryekeeft keni
//
LOCUS       WP_258058615             184 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaJ domain-containing protein [Lactococcus lactis].
ACCESSION   WP_258058615
VERSION     WP_258058615.1
KEYWORDS    RefSeq.
SOURCE      Lactococcus lactis
  ORGANISM  Lactococcus lactis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Lactococcus.
REFERENCE   1  (residues 1 to 184)
  AUTHORS   Kelley,W.L.
  TITLE     The J-domain family and the recruitment of chaperone power
  JOURNAL   Trends Biochem Sci 23 (6), 222-227 (1998)
   PUBMED   9644977
REFERENCE   2  (residues 1 to 184)
  AUTHORS   Stubdal,H., Zalvide,J., Campbell,K.S., Schweitzer,C., Roberts,T.M.
            and DeCaprio,J.A.
  TITLE     Inactivation of pRB-related proteins p130 and p107 mediated by the
            J domain of simian virus 40 large T antigen
  JOURNAL   Mol Cell Biol 17 (9), 4979-4990 (1997)
   PUBMED   9271376
REFERENCE   3  (residues 1 to 184)
  AUTHORS   Pellecchia,M., Szyperski,T., Wall,D., Georgopoulos,C. and
            Wuthrich,K.
  TITLE     NMR structure of the J-domain and the Gly/Phe-rich region of the
            Escherichia coli DnaJ chaperone
  JOURNAL   J Mol Biol 260 (2), 236-250 (1996)
   PUBMED   8764403
REFERENCE   4  (residues 1 to 184)
  AUTHORS   Cyr,D.M., Langer,T. and Douglas,M.G.
  TITLE     DnaJ-like proteins: molecular chaperones and specific regulators of
            Hsp70
  JOURNAL   Trends Biochem Sci 19 (4), 176-181 (1994)
   PUBMED   8016869
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012451.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00226.36
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Lactococcus lactis"
                     /db_xref="taxon:1358"
     Protein         1..184
                     /product="DnaJ domain-containing protein"
                     /calculated_mol_wt=21915
     Region          <2..61
                     /region_name="COG4243"
                     /note="Vitamin K epoxide reductase (VKOR) family protein,
                     predicted involvement in disulfide bond formation [General
                     function prediction only]"
                     /db_xref="CDD:443385"
     Region          126..>181
                     /region_name="PRK10266"
                     /note="curved DNA-binding protein"
                     /db_xref="CDD:182347"
ORIGIN      
        1 mliafvivti tsfiwkyrgl iyflgivfli wlffkfffva livilglvia yfirrvqene
       61 rmsseadkak qahqedvnaw rkeqerkygs nwyqanrdeq kaeannarnn qttklidydr
      121 rwdstdpyii lgvrevstfs eiknqykfls kkyhpdvate ansdaimkki nwawdeikke
      181 qeny
//
LOCUS       WP_258058676             246 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase family protein [Rathayibacter rathayi].
ACCESSION   WP_258058676
VERSION     WP_258058676.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter rathayi
  ORGANISM  Rathayibacter rathayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 246)
  AUTHORS   Kapitonov,V.V. and Jurka,J.
  TITLE     Harbinger transposons and an ancient HARBI1 gene derived from a
            transposase
  JOURNAL   DNA Cell Biol 23 (5), 311-324 (2004)
   PUBMED   15169610
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13359.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Rathayibacter rathayi"
                     /db_xref="taxon:33887"
     Protein         1..246
                     /product="transposase family protein"
                     /calculated_mol_wt=26466
     Region          60..180
                     /region_name="DDE_Tnp_4"
                     /note="DDE superfamily endonuclease; pfam13359"
                     /db_xref="CDD:463855"
ORIGIN      
        1 mvtllllrqn lnqaavadlh gvsqatvsri yrrivplieq accfsgisle eaargrvvlv
       61 dgtdvptrnr aeagrsnysg krhrqglnvq iaadldgrll aasdpiagar hdraalalcg
      121 wepildrtdw iadpgytgtt attprtrsrd stlddntkks nreisrtrsa verciahlkn
      181 gkiiatdalf rgapapatry gggrfgrhpv dgctlrpgwr llsafeglrr aqtghasgsf
      241 vsppgh
//
LOCUS       WP_258058688             365 aa            linear   BCT 02-MAR-2025
DEFINITION  alanine racemase [Arthrobacter sp. B1805].
ACCESSION   WP_258058688
VERSION     WP_258058688.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. B1805
  ORGANISM  Arthrobacter sp. B1805
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 365)
  AUTHORS   Shaw,J.P., Petsko,G.A. and Ringe,D.
  TITLE     Determination of the structure of alanine racemase from Bacillus
            stearothermophilus at 1.9-A resolution
  JOURNAL   Biochemistry 36 (6), 1329-1342 (1997)
   PUBMED   9063881
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013345.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01168.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Arthrobacter sp. B1805"
                     /db_xref="taxon:2058892"
     Protein         1..365
                     /product="alanine racemase"
                     /EC_number="5.1.1.1"
                     /calculated_mol_wt=37862
     Region          9..362
                     /region_name="PLPDE_III"
                     /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
                     Enzymes; cl00261"
                     /db_xref="CDD:469695"
     Site            order(41,43,84,135,168,170,228..231)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate (PLP) binding site [chemical
                     binding]"
                     /db_xref="CDD:143494"
     Site            43
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:143494"
ORIGIN      
        1 mvpiltgast pavvvdadil grniaamars vqerglvlrp hakthkiiei ahhqiaagai
       61 gltvatvgea evfaaagvtd ifiayplwvd eraagrlltl adhahmtvgv esaegalrla
      121 rslgasasrv evrievdsgh hrsgvpphev levaaaasaa glavvgiftf pghsygpgaa
      181 eaavadeara lsvavsaled agfrdlevsg gstpsarlss gstltelrpg vyvfgdaqqw
      241 elghclpedi altvegtvvs hrcgapgqpg rfivdagskv lgsdrapwat gygrlldhpe
      301 arivalsehh atvewpcgal pplgarlrvv pnhvclavnl vdevqvvrdg vlrerwtvaa
      361 rgrns
//
LOCUS       WP_258058814             422 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rathayibacter rathayi].
ACCESSION   WP_258058814
VERSION     WP_258058814.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter rathayi
  ORGANISM  Rathayibacter rathayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Rathayibacter rathayi"
                     /db_xref="taxon:33887"
     Protein         1..422
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=42399
     Region          19..411
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(25..26,29..30,33,65,115..116,118..120,123,143,
                     146..147,150,241,244..245,248..250,253,280,284,337..338,
                     342,346,362,365..366,369..370,373)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mtstaslpfp lgplllstfl ptllfsigeg aiipllpaaa gdlgatlala glvagmimig
       61 elagdipsgw ivsrigerga mlaasaasil glvicllsts wvgliigvfv iglatavfal
      121 arhafmtsfv pithrarals slagvfragw ligpflsagv vhltgsvksv fwvhivccva
      181 avvvlllvpd patvlrraqa aanrdapdav iaaatvpess qsllrtlreh rgvlarmgsg
      241 aavigalrss rtlilplwav siglaetdta iiiggagald falfyvggql mdrfgrgata
      301 ipsmiglglg hvalaaslla adpvpwfiav acvlaaangi gsgilmtiga dlappadpap
      361 flgafrftgd agnaaapivv saltalvslp faasamgvlg vtgagalarw iprylprtap
      421 rg
//
LOCUS       WP_258058768             415 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Arthrobacter sp. B1805].
ACCESSION   WP_258058768
VERSION     WP_258058768.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. B1805
  ORGANISM  Arthrobacter sp. B1805
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 415)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 415)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 415)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 415)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Arthrobacter sp. B1805"
                     /db_xref="taxon:2058892"
     Protein         1..415
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=43633
     Region          18..385
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mstlamsgcg paqadngltw yinpdaggqa aiaqkcsees ggrysietsl lpsdaasqre
       61 qlarrlaagd tsldimsldp pfipelaepg flapvpeela esasenvveg alagatwkde
      121 lvtvpfwant qilwyrksva eaagldmtkp vtwdqimeaa ksqekalgvq gaqaesmtvw
      181 vnalvesagg siivdpeata dtielgldse agaeaarvis tigkdglggp glptqdengs
      241 liafqgdsgs fmvnypfvwp attaaveagt ldqevlddlg wgifprmted qesapplggi
      301 nlgvgaesdn pelayeaiec ivavenqsey fvtngnppsn teayedprie esfpmaetir
      361 dslqlaaprp qtpfynevst giqqtwappa avdpestpgs sstfitsvlr geqll
//
LOCUS       WP_258058856             483 aa            linear   BCT 02-MAR-2025
DEFINITION  GmrSD restriction endonuclease domain-containing protein
            [Arthrobacter sp. B1805].
ACCESSION   WP_258058856
VERSION     WP_258058856.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. B1805
  ORGANISM  Arthrobacter sp. B1805
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 483)
  AUTHORS   Gao,H., Gong,X., Zhou,J., Zhang,Y., Duan,J., Wei,Y., Chen,L.,
            Deng,Z., Wang,J., Chen,S., Wu,G. and Wang,L.
  TITLE     Nicking mechanism underlying the DNA phosphorothioate-sensing
            antiphage defense by SspE
  JOURNAL   Nat Commun 13 (1), 6773 (2022)
   PUBMED   36351933
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 483)
  AUTHORS   Machnicka,M.A., Kaminska,K.H., Dunin-Horkawicz,S. and Bujnicki,J.M.
  TITLE     Phylogenomics and sequence-structure-function relationships in the
            GmrSD family of Type IV restriction enzymes
  JOURNAL   BMC Bioinformatics 16, 336 (2015)
   PUBMED   26493560
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019151.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07510.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Arthrobacter sp. B1805"
                     /db_xref="taxon:2058892"
     Protein         1..483
                     /product="GmrSD restriction endonuclease domain-containing
                     protein"
                     /calculated_mol_wt=49210
     Region          118..>193
                     /region_name="kgd"
                     /note="multifunctional oxoglutarate
                     decarboxylase/oxoglutarate dehydrogenase thiamine
                     pyrophosphate-binding subunit/dihydrolipoyllysine-residue
                     succinyltransferase subunit; cl39092"
                     /db_xref="CDD:476867"
     Region          235..374
                     /region_name="DUF1524"
                     /note="Protein of unknown function (DUF1524); pfam07510"
                     /db_xref="CDD:462188"
     Region          446..482
                     /region_name="Excalibur"
                     /note="Excalibur calcium-binding domain; smart00894"
                     /db_xref="CDD:214891"
ORIGIN      
        1 mgrmpgirsr astlhqdias tlgasissss fppahnpsgt akpkvrtsta vvggialflv
       61 viglitngls galimaalfa lftglytllt nrpswvglag raagamtaga avvvllvgta
      121 iapasesvpt aaaeateqae ptspsasasp tatasakptp sptpsatpsd vapldsdtva
      181 nvsgtpraps dqpaanttal alletlpikg rapktgydre qfgqawadvd rngcdtrndm
      241 lnrdltdivh ansvpckvqs gvlddpytat viafqrgqat strvqidhvv alsdawqkga
      301 qqltldqria fandplnlqs tdgptnqqkg agdaatwlpp ntsyrceyva rqvsvkatya
      361 lwvtqaehda mvriltdcng ilaptnqvap siaqptepvq aeapapivpe pvappapvap
      421 apapapvapa pvapapvapa papapyyanc davraagaap iyagtpgfqp kfdrdndgvg
      481 cds
//
LOCUS       WP_258058865             399 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rathayibacter rathayi].
ACCESSION   WP_258058865
VERSION     WP_258058865.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter rathayi
  ORGANISM  Rathayibacter rathayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Rathayibacter rathayi"
                     /db_xref="taxon:33887"
     Protein         1..399
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=40478
     Region          20..336
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(22..23,26,58,108..109,111..113,116,135,138..139,142,
                     210,213..214,217..219,222,246,250,301..302,306,310,325,
                     328..329,332..333,336)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mlkqplavwa vafaaviafm giglvdpilp aiaeslratp tetsllftsy lvitgvvmff
       61 tswlssriga kktlmiglvl ivvfaalagt agsvegvigf ragwgfgnal fistalstiv
      121 gaasggssaa ivlyeaalgi giaigpllgg llgsvswrgp ffgtavlmav gaiaiatllr
      181 edgprptptp lsapfaalrv pairslaaaa lfynigffvl laytpyplgl demglgftff
      241 gwglgvaits vfaaplltar lprtvvlrsv llllaldlva gglvissrvg livciivggl
      301 llgvvntvlt ecvmeatdlp rsvassaysg vrflggaiap paasalaaai spafpmyaaa
      361 gavaiaaliv llgrrtlara dahepepelv eaqaitfge
//
LOCUS       WP_258058913             149 aa            linear   BCT 02-MAR-2025
DEFINITION  BLUF domain-containing protein [Arthrobacter sp. B1805].
ACCESSION   WP_258058913
VERSION     WP_258058913.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. B1805
  ORGANISM  Arthrobacter sp. B1805
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016807.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04940.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Arthrobacter sp. B1805"
                     /db_xref="taxon:2058892"
     Protein         1..149
                     /product="BLUF domain-containing protein"
                     /GO_function="GO:0009882 - blue light photoreceptor
                     activity [Evidence IEA]"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /calculated_mol_wt=17171
     Region          11..99
                     /region_name="BLUF"
                     /note="Sensors of blue-light using FAD; pfam04940"
                     /db_xref="CDD:461495"
     Region          <122..149
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
ORIGIN      
        1 mtlpennlls ivysssaahp ftdedlgall vlcrennars qltgmllyre grflqvlegp
       61 edalrhrmsv iaadprhlev rillqetidr ryfpdwtmgy epvsdrmade ipgyratlsd
      121 veddddpqrs vralrelirw fqdraiqlr
//
LOCUS       WP_258058957             286 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Rathayibacter rathayi].
ACCESSION   WP_258058957
VERSION     WP_258058957.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter rathayi
  ORGANISM  Rathayibacter rathayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 286)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 286)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Rathayibacter rathayi"
                     /db_xref="taxon:33887"
     Protein         1..286
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=30340
     Region          7..273
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(14,16..17,19,38..40,86..88,144..146,167,171,
                     197..200)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(108,146,167,171)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mvtdmtgrvv vltgassgig rvaagalaaa garvavvgrh pertravaae vggdpfladf
       61 drlddvrala dvlleryeri dvlannaggl vshraetvdg hertvqsnhl apflltrlll
      121 prmvetsrer agvrivstas lanrfgrlkl ddldnrrgpw fggwraygts klvtilfire
      181 laerllttsv daysfhpgvv stsfgadstm mklmtslsvg sfgisaeaga vplitlasep
      241 dvgaasgtyf dqltphgsln pqahnralah dlwtlssrlv gvsptl
//
LOCUS       WP_258058980             141 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Rathayibacter rathayi].
ACCESSION   WP_258058980
VERSION     WP_258058980.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter rathayi
  ORGANISM  Rathayibacter rathayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00528.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Rathayibacter rathayi"
                     /db_xref="taxon:33887"
     Protein         1..141
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=14327
     Region          <30..>71
                     /region_name="TauC"
                     /note="ABC-type nitrate/sulfonate/bicarbonate transport
                     system, permease component [Inorganic ion transport and
                     metabolism]; COG0600"
                     /db_xref="CDD:440365"
ORIGIN      
        1 mvgasaglpd dsagaapgga gaprpaegvr gnawqtartf tlpgavpyvf mglriassla
       61 visalvaeyf geyfggpvgg lgksittvas gsdyafayay ayayayayay ayvlgavlvg
      121 vvffsvtaal eafarrrsrv r
//
LOCUS       WP_258059013             698 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5719 family protein [Arthrobacter sp. B1805].
ACCESSION   WP_258059013
VERSION     WP_258059013.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. B1805
  ORGANISM  Arthrobacter sp. B1805
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040160.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18986.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Arthrobacter sp. B1805"
                     /db_xref="taxon:2058892"
     Protein         1..698
                     /product="DUF5719 family protein"
                     /calculated_mol_wt=68187
     Region          <13..>253
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     Region          309..642
                     /region_name="DUF5719"
                     /note="Family of unknown function (DUF5719); pfam18986"
                     /db_xref="CDD:465942"
ORIGIN      
        1 miwgrkrdtt mrgvtaenad aqpagdsaqg mqeessagit padgspvgga pvsgtaakpe
       61 radadidatp agaaveprvt esrtagvads eatadsaaep egadaavvmp agaavespva
      121 esrtagvads eatadsaael qradaavaar avardraags gagtrrrtra gtavgvatgv
      181 mllaataaia sgtvtetlir tpgtglavpt aavpagdyta vcpapprllq aavegsdpey
      241 spasataktt vaslvlsdls atltgsgllq adggepirmi eefspepnpa aekpassned
      301 gltgrtagva rglsvdapsv fraqpqgglt pvaaatstyt atdgdlrgla atgcqvpssd
      361 fwlmgasttv gqssililtn ptetpatval elygqdgpie aagtrgqlva pgetrqivla
      421 gvsgnqdqva vrvrsdggri agfiqqsvlr gltpggvell apsgpagvtq vlpgvvvqde
      481 atarrireqe gygsaapqlq vlvpgssdav ldikvygpdg evalpgggvv taaagsvtav
      541 pleslpggny tiavtsdvsv vasarltrgv ddgepvdfag apaavrlgsd halafaegad
      601 vslvlgapsg rgevtltpva adgalgkpvv igiaggtsvt vpsssfgptp agvivdatgd
      661 pvygaqiatl pgaragvsvv svpagatgpq sipvelgy
//
LOCUS       WP_258059036             578 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Arthrobacter sp. B1805].
ACCESSION   WP_258059036
VERSION     WP_258059036.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. B1805
  ORGANISM  Arthrobacter sp. B1805
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Arthrobacter sp. B1805"
                     /db_xref="taxon:2058892"
     Protein         1..578
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=62200
     Region          62..552
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mnipaacrnr pgrsvhggir ivaalasvvl lasctardvp aphpsptasa taevtatpea
       61 stftfgtaad prtldpalan dtesyrvtqq vlqglvgvdp ltseptalla esweekddgr
      121 tyaftlredv vfqdgepfda eavcanfdrw ytlpagarsg taslpfkdvf rafsdqpevs
      181 lysgctatgk ysvdlkltsr itglisalaa pafaisspaa leagaadels esregveisr
      241 ygqapvgtgp felaswqpgt velsffdgyw gergeidrvv fttipspdsr araltagrid
      301 gydfvsvdsa vdlarnglqf lqrdpysvly lglnedfpgv dnvlfreava haidkdslid
      361 grflngtkpa rqfipeklgv sgervedygy dldlakdllt rsgydgrplp fyyprnvsra
      421 ylpspekaya elsrqlteag ftikpvpvew sdgyaatvqq sgdrafhllg wsgsyddpdn
      481 fvgalfgsys defgyddpql vskinrargl pdgedrsday adisaqiaar ipavplafpi
      541 salamsarvs typvspvmne vfnridladv eprptpsg
//
LOCUS       WP_258059121             311 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase-like protein [Arthrobacter sp. B1805].
ACCESSION   WP_258059121
VERSION     WP_258059121.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. B1805
  ORGANISM  Arthrobacter sp. B1805
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024848.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13456.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Arthrobacter sp. B1805"
                     /db_xref="taxon:2058892"
     Protein         1..311
                     /product="reverse transcriptase-like protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /calculated_mol_wt=33925
     Region          24..>185
                     /region_name="PRK07238"
                     /note="bifunctional RNase H/acid phosphatase; Provisional"
                     /db_xref="CDD:180903"
     Region          187..310
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mtdqqlfdpy esdhdqqpad aparlivead ggsrgnpgha gygalvrdpd tgrilvekaa
       61 yigkasnnva eysglvsgle lareinpaas vhvkmdsklv veqmsgrwqi khadmrvlaa
      121 karkvldprr vtyewiprer nkdadrlsne amdagmagvd wkpraaaatv ageppvaaav
      181 prpagrlhhl evwtrdlpaa easlgwller lgfprreswk dgvsygsddf yvvlesgpdv
      241 adatherrrp gvnhlafrag sradvdllar raashgwtll fadrhpfagg pehyaaylen
      301 aegfemelva v
//
LOCUS       WP_258059138             307 aa            linear   BCT 02-MAR-2025
DEFINITION  MaoC/PaaZ C-terminal domain-containing protein [Arthrobacter sp.
            B1805].
ACCESSION   WP_258059138
VERSION     WP_258059138.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. B1805
  ORGANISM  Arthrobacter sp. B1805
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Fukui,T., Shiomi,N. and Doi,Y.
  TITLE     Expression and characterization of (R)-specific enoyl coenzyme A
            hydratase involved in polyhydroxyalkanoate biosynthesis by
            Aeromonas caviae
  JOURNAL   J Bacteriol 180 (3), 667-673 (1998)
   PUBMED   9457873
REFERENCE   2  (residues 1 to 307)
  AUTHORS   Steinebach,V., Benen,J.A., Bader,R., Postma,P.W., De Vries,S. and
            Duine,J.A.
  TITLE     Cloning of the maoA gene that encodes aromatic amine oxidase of
            Escherichia coli W3350 and characterization of the overexpressed
            enzyme
  JOURNAL   Eur J Biochem 237 (3), 584-591 (1996)
   PUBMED   8647101
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013722.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01575.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Arthrobacter sp. B1805"
                     /db_xref="taxon:2058892"
     Protein         1..307
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /calculated_mol_wt=32893
     Region          193..288
                     /region_name="hot_dog"
                     /note="The hotdog fold was initially identified in the E.
                     coli FabA (beta-hydroxydecanoyl-acyl carrier protein
                     (ACP)-dehydratase) structure and subsequently in 4HBT
                     (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A
                     number of other seemingly unrelated...; cl00509"
                     /db_xref="CDD:469797"
     Site            order(229..230,255..258)
                     /site_type="active"
                     /note="active site 2 [active]"
                     /db_xref="CDD:239537"
     Site            order(235..236,239,247..249)
                     /site_type="active"
                     /note="active site 1 [active]"
                     /db_xref="CDD:239537"
ORIGIN      
        1 mngtaaddvt lpeapelptl yrsaltlavq rragrgdvpt rlpaarhrvd rvavdlgalt
       61 rfqqllgspv rdqlpsayih tiafpvamsv lartdfplpl lgmvhlrnev hqvrqvgfhe
      121 kldvvafaen lrahpagmqa dlvtqvdidg eqvwtgrsvy largvrigpa mgerhdedrp
      181 pfvapaptgv wrldrgvgrr yaavsgdwnp ihlsgptaka lgmrgaiahg mylaarmvdq
      241 avpapsgalq wrvdfaapvl lpgtvttsft rvasgidsga dsgarvdvvg wsakrkrphf
      301 tgsvrag
//
LOCUS       WP_258059158             607 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase [Arthrobacter sp. B1805].
ACCESSION   WP_258059158
VERSION     WP_258059158.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. B1805
  ORGANISM  Arthrobacter sp. B1805
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 607)
  AUTHORS   de la Cruz,J., Kressler,D. and Linder,P.
  TITLE     Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and
            related families
  JOURNAL   Trends Biochem Sci 24 (5), 192-198 (1999)
   PUBMED   10322435
REFERENCE   2  (residues 1 to 607)
  AUTHORS   Aubourg,S., Kreis,M. and Lecharny,A.
  TITLE     The DEAD box RNA helicase family in Arabidopsis thaliana
  JOURNAL   Nucleic Acids Res 27 (2), 628-636 (1999)
   PUBMED   9862990
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012492.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00270.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Arthrobacter sp. B1805"
                     /db_xref="taxon:2058892"
     Protein         1..607
                     /product="DEAD/DEAH box helicase"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=65527
     Region          4..405
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     Region          477..549
                     /region_name="RRM_EcCsdA_like"
                     /note="RNA recognition motif (RRM) found in Escherichia
                     coli cold-shock DEAD box protein A (CsdA) and similar
                     proteins; cd12499"
                     /db_xref="CDD:409922"
     Site            order(484,489..492,494..496,498..499,505,508..511,
                     541..542,545)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409922"
ORIGIN      
        1 mdirftelnl dgrilaaltd lgyekpspiq aatipvlleg rdvvglaqtg tgktaafavp
       61 alskmaelad vnggpskntq vlvlaptrel alqvadafts yakhmegftv lpvyggspyg
      121 pqlnglrrga qvvvgtpgrv idhiekgsld lsnleyvvld eademlrmgf aedvekilas
      181 tpaekqvalf satmppairr iakkylndpa eisvkgkttt gtntrqrylq vmgphkldam
      241 trilevedyd giiafvrtka atedladklr srgfsaaain gdipqqqrer tvealrdgki
      301 dilvatdvaa rgldverisl vvnydipndt esyvhrigrt gragrsgdai lfitprekyl
      361 lrsiekatrq pveqmqlpst ekinelrlsk fadkitqtla gkdvalfrdl iatyerehnv
      421 panevaaala vmaqggqpil vqdipvapag qreraegrkd afgsrgptrt ltegnatyri
      481 avgrrqrvmp gsivgaiane gglsssqigg idiradhslv elpadlstdq lralsktrig
      541 gelihleldk grkpagnrga gefkkpfkkd fpkrdgdtrf tgdanrkpra kgagagagrs
      601 svqseqw
//
LOCUS       WP_258059165             195 aa            linear   BCT 02-MAR-2025
DEFINITION  LysM peptidoglycan-binding domain-containing protein [Arthrobacter
            sp. B1805].
ACCESSION   WP_258059165
VERSION     WP_258059165.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. B1805
  ORGANISM  Arthrobacter sp. B1805
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 195)
  AUTHORS   Bateman,A. and Bycroft,M.
  TITLE     The structure of a LysM domain from E. coli membrane-bound lytic
            murein transglycosylase D (MltD)
  JOURNAL   J Mol Biol 299 (4), 1113-1119 (2000)
   PUBMED   10843862
REFERENCE   2  (residues 1 to 195)
  AUTHORS   Joris,B., Englebert,S., Chu,C.P., Kariyama,R., Daneo-Moore,L.,
            Shockman,G.D. and Ghuysen,J.M.
  TITLE     Modular design of the Enterococcus hirae muramidase-2 and
            Streptococcus faecalis autolysin
  JOURNAL   FEMS Microbiol Lett 70 (3), 257-264 (1992)
   PUBMED   1352512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01476.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Arthrobacter sp. B1805"
                     /db_xref="taxon:2058892"
     Protein         1..195
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=19429
     Region          2..41
                     /region_name="LysM"
                     /note="Lysin Motif is a small domain involved in binding
                     peptidoglycan; cd00118"
                     /db_xref="CDD:212030"
     Region          <62..183
                     /region_name="NlpC"
                     /note="Cell wall-associated hydrolase, NlpC_P60 family
                     [Cell wall/membrane/envelope biogenesis]; COG0791"
                     /db_xref="CDD:440554"
ORIGIN      
        1 mqsgdtlgqi aaqhgidlsa llslnglsle sviypgdrin ltapaagpaa apaaaprlmt
       61 lagsigsage sssavpdtsr eesassstnq ailaaaraql gavqdctvlg evalraagip
      121 gvgdespesl mayatpvsnp qpgdfiyyad ggmgfshnav yigngqaihs gwngnqtvie
      181 svdvgsgpvy yrvna
//
LOCUS       WP_258059216             146 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Staphylococcus
            pseudintermedius].
ACCESSION   WP_258059216
VERSION     WP_258059216.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus intermedius
            group.
REFERENCE   1  (residues 1 to 146)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 146)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Staphylococcus pseudintermedius"
                     /db_xref="taxon:283734"
     Protein         1..146
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=17100
     Region          8..>94
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
ORIGIN      
        1 marsrrskkf yslikkrniy qyfvcvtaid fgcrigeila ikmndidfen qtiridesyd
       61 qksdtcsttk ngeirildfs nsyknilnqm lklhetnkvl hedlynndsi rfmltklanq
      121 ylchhyiihy nilakstsin icpcin
//
LOCUS       WP_258059225             251 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase domain-containing protein, partial
            [Staphylococcus pseudintermedius].
ACCESSION   WP_258059225
VERSION     WP_258059225.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus intermedius
            group.
REFERENCE   1  (residues 1 to 251)
  AUTHORS   Xiong,Y. and Eickbush,T.H.
  TITLE     Origin and evolution of retroelements based upon their reverse
            transcriptase sequences
  JOURNAL   EMBO J 9 (10), 3353-3362 (1990)
   PUBMED   1698615
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00078.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Staphylococcus pseudintermedius"
                     /db_xref="taxon:283734"
     Protein         <1..251
                     /product="reverse transcriptase domain-containing protein"
     Region          <9..184
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            21
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238828"
ORIGIN      
        1 vvgaidlsge vaerkigapq ggvispllcn iylheldkel ekrghrfvry addfvifvrt
       61 kragervmss vtkfiekqlk lvvneekskv gavtrlkfls clitkvngvc rfrptteakr
      121 nlirtlrkit krnrpgtfke iiteinqvtr gwinyfgrgf irvflettqs wlnrrlrqli
      181 lkrwkrvrtk ykmlrqygld hrsamkiaqs rkkywrlsnt hevhralttk qlykwglipl
      241 aqlaelayar y
//
LOCUS       WP_258059250             215 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: response regulator [unclassified Rathayibacter].
ACCESSION   WP_258059250
VERSION     WP_258059250.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 215)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..215
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=22642
     Region          1..199
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mtettprrvl lvedqqmirr glvmllstve gvvvsaqaen gqaalhilrt tevdvvvtda
       61 rmpvmggvel aaecaqlhpr lpvlllttfd ddalvqaals agasgfllkd tsveglvval
      121 daviaggmvi dprvarpavq pgrtgesplt lltrservva elvaegrtnr eiaaalvlae
      181 gtvknhvsal lrklglrdrt alaltlykgf rpdga
//
LOCUS       WP_258059347             900 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Rathayibacter sp. AY1E6].
ACCESSION   WP_258059347
VERSION     WP_258059347.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1E6
  ORGANISM  Rathayibacter sp. AY1E6
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 900)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Rathayibacter sp. AY1E6"
                     /db_xref="taxon:2080554"
     Protein         1..900
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=92787
     Region          66..324
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     Region          351..894
                     /region_name="PRK09274"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:236443"
ORIGIN      
        1 mtaphpaeri rgalgstaaa qlppagldgl dpawsrlvda pdaqgvprrw hlldtgealg
       61 tepvgtvlcv hgnptwsylw rrlaaatles arsggpawrv vavdqlemgf sertgalhtl
      121 adrvrelsdl tdvlglddvv tlghdwggvv slgwavdhpe qlratmllnt aihqsadepi
      181 paplrlalas gvlgastvgt paflettlal ghpalpsavk egyrapyrsa srrggvggfv
      241 adipvdsahp sdpelqriae gvsalttpal mlwgpldpif sdrylddlvd rlphaqvhry
      301 egaghlvaed vdyssavltw lgdlsdgeep fggdpapdvr rptapveplw ahldrnaqdd
      361 slalvemapp ggggprsvsw rllsqrvrel aaglrasgvs pgdrvsllvp pgadltally
      421 aclrigavvv vadaglglrg ltravrgawp dlvvgalpgl avaralrwpg grvstqtlpr
      481 asasalgvdt slgqlielgr aelaadpeal geapaadava ailftsgstg pakgvvythr
      541 qlagvrdala rqygigpgtg lvagfapfal lgpalgtrsa tpdmdvtapr tltaaavaaa
      601 aarvdatvlf lspaalanvv atagaldvdd hralagvrtf lsagapvsag llgeaqalmp
      661 nasartpygm tegllltdas legireaasd ddprggvcvg vpaagvrlri apldaggraa
      721 depeeitgtt geivvsaghv edhyerlwlt draarvgavp gerwhrtgdv gridsagrlw
      781 vegrmphvvv tpdgvvtpvg peqriearvt svaraaivga gprgvaqlva vvelrsgarr
      841 vvlaeealaa evraavgrpv aavlvvpalp tdirhnskid raalsrwaeg vlaggpmvap
//
LOCUS       WP_258059407             229 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Rathayibacter sp. AY1E6].
ACCESSION   WP_258059407
VERSION     WP_258059407.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1E6
  ORGANISM  Rathayibacter sp. AY1E6
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Rathayibacter sp. AY1E6"
                     /db_xref="taxon:2080554"
     Protein         1..229
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=24196
     Region          <1..226
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mttvhgfsgp eilpayreal rhprtahlvs isdsdrspel dyaatvhhgi dvdgfpagsg
       61 gedlvilgri hpdkgtaeav riaaaagrrl vicgivqder ywreeveplv dgtrvvyrgs
      121 vgpeeralvl ggalallhpi gfdepfglsv veamacgtpv iayrrgsmae iidegvtgya
      181 vgsaaeavaa vgrvglldra avratarrrf avdrmvdeyl avyagvlgr
//
LOCUS       WP_258058855             310 aa            linear   BCT 02-MAR-2025
DEFINITION  Ltp family lipoprotein [Arthrobacter sp. B1805].
ACCESSION   WP_258058855
VERSION     WP_258058855.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. B1805
  ORGANISM  Arthrobacter sp. B1805
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 310)
  AUTHORS   Bebeacua,C., Lorenzo Fajardo,J.C., Blangy,S., Spinelli,S.,
            Bollmann,S., Neve,H., Cambillau,C. and Heller,K.J.
  TITLE     X-ray structure of a superinfection exclusion lipoprotein from
            phage TP-J34 and identification of the tape measure protein as its
            target
  JOURNAL   Mol Microbiol 89 (1), 152-165 (2013)
   PUBMED   23692331
REFERENCE   2  (residues 1 to 310)
  AUTHORS   Neve,H., Zenz,K.I., Desiere,F., Koch,A., Heller,K.J. and Brussow,H.
  TITLE     Comparison of the lysogeny modules from the temperate Streptococcus
            thermophilus bacteriophages TP-J34 and Sfi21: implications for the
            modular theory of phage evolution
  JOURNAL   Virology 241 (1), 61-72 (1998)
   PUBMED   9454717
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019191.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07553.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Arthrobacter sp. B1805"
                     /db_xref="taxon:2058892"
     Protein         1..310
                     /product="Ltp family lipoprotein"
                     /calculated_mol_wt=32757
     Region          <76..106
                     /region_name="TM2"
                     /note="TM2 domain; pfam05154"
                     /db_xref="CDD:428337"
     Region          219..261
                     /region_name="Lipoprotein_Ltp"
                     /note="Host cell surface-exposed lipoprotein; pfam07553"
                     /db_xref="CDD:462206"
     Region          264..305
                     /region_name="Lipoprotein_Ltp"
                     /note="Host cell surface-exposed lipoprotein; pfam07553"
                     /db_xref="CDD:462206"
ORIGIN      
        1 msnteqppys pkgfegqgnq pfaqqgsgyp gspggypgat qqypqsqygq eqgysqpqks
       61 flatwllslf lgglgvdrfy lgkvgtgiik lltlgglgiw ylidlvitlt gnqtdsqkrr
      121 lagypehkvk awiitvvvil asfvinaisf samansvats qpapiastva eepagaetpt
      181 vaetaapeps pttpaaeepa aaepaapepa pasamtsgqk navqsaesyl dytafsrtgl
      241 ikqlefekys tedatyavdn vtvdwneqaa ksaanyleft sfsrpglvdq llfegftpeq
      301 aeygvsttgl
//
LOCUS       WP_258059412             409 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Clavibacter michiganensis].
ACCESSION   WP_258059412
VERSION     WP_258059412.1
KEYWORDS    RefSeq.
SOURCE      Clavibacter michiganensis
  ORGANISM  Clavibacter michiganensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Clavibacter.
REFERENCE   1  (residues 1 to 409)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Clavibacter michiganensis"
                     /db_xref="taxon:28447"
     Protein         1..409
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=41972
     Region          17..396
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mtgtvtgpda gvagivdpvd laaelirids tnpdlvpgaa getavaahva awlrargfdv
       61 rvlegtpgrp tvlatargtg ggrtilldgh ldtvppgdpe rggllpried grlhgrgafd
      121 mkaglaammv aadrarrvgt rgdvvlalva deefgsrgte ealralaadg tridgavise
      181 psqseaivah rgfgwygirl rgraahgsmp eqgvdaiaha glvlreldal adrlaagprh
      241 pllgtgavrv srihggsdaa tvadscvitv errflpgqst adveaelraa ldavaartpg
      301 mdveleplva raafeadvdg plaravldsg arvagspvph rgepfwtdag lvheagipci
      361 llgvtgggah adeewaevds irrladvleg aildfcggdr ivptsrpia
//
LOCUS       WP_258059521             423 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: acyl-CoA dehydrogenase family protein [unclassified
            Rathayibacter].
ACCESSION   WP_258059521
VERSION     WP_258059521.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 423)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 423)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02771.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..423
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=45444
     Region          39..417
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(115,145,147,171,173,400..402,404,406)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mtttapttag adaattigaa aehwsaaprp dspdawlvra eevaavlatd alerdragaa
       61 pfaevallka aglvtllgpa ehgggaqewt talrvvrtva rgdgsigqll gyhylwawaa
      121 rlvgtpeqii aveqlategd llyggavnpr dsdltvreeg delvftgrks fstggvvsdl
      181 tvlegvlegt dthlfaivpt dqegivfgrd wdslgqrlte sgsveirgvr vpwaaaagfv
      241 dkvyrplvyn tlnvpviqqv faefylgiaq galeraaqyt rertrawpyg gddkeragde
      301 wyvlegygdl qsrlwadeal idatgaalsa alhapreelt prrrgeiavr iaaakarive
      361 dglatatrvf eltgarasas svgldlywrn lrthslhdpl pykrrevgvf alldtvpeps
      421 wyt
//
LOCUS       WP_258059668             393 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rathayibacter rathayi].
ACCESSION   WP_258059668
VERSION     WP_258059668.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter rathayi
  ORGANISM  Rathayibacter rathayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Rathayibacter rathayi"
                     /db_xref="taxon:33887"
     Protein         1..393
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=40724
     Region          13..382
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(15,47,105..106,108..110,113,133,136..137,140,215,
                     218..219,222..224,227,255,259,311..312,316,320,336,
                     339..340,343..344,347)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 maaqasfaaa fagipvtgtl lrtayhlttg elgvvlaail lgvaaseivw glftdmfgdr
       61 rvlliglist glvfvvmavf vvpsearvps vwllagglll vgllggsvns ssgravmlwf
      121 tdgqrgfams vrqtaipagg aigaallpwl aafsgfravf lvlagfclat alatarwlre
      181 preepnpvgp iaagdpaqgr splvrwdcwr ialasalltm pqiailgfag iylhdvkhad
      241 livisatilt vqvggavlrv wsgrytdrkg nrrrfvavig lltggsllaa vsllwaptvv
      301 valalvvagi lanswhgvay temavmagts ragaalglen ttaftgafvt pllvplllai
      361 gswplawtvi aiaplvaapl vprtistvtt rhd
//
LOCUS       WP_258059733             307 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-dependent oxidoreductase [Rathayibacter sp. AY1A7].
ACCESSION   WP_258059733
VERSION     WP_258059733.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1A7
  ORGANISM  Rathayibacter sp. AY1A7
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Dengler,U., Niefind,K., Kiess,M. and Schomburg,D.
  TITLE     Crystal structure of a ternary complex of D-2-hydroxyisocaproate
            dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate
            at 1.9 A resolution
  JOURNAL   J Mol Biol 267 (3), 640-660 (1997)
   PUBMED   9126843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02826.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Rathayibacter sp. AY1A7"
                     /db_xref="taxon:2080524"
     Protein         1..307
                     /product="NAD(P)-dependent oxidoreductase"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
                     /calculated_mol_wt=31634
     Region          6..307
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(136..138,140,158..160,190..191,218)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:240631"
ORIGIN      
        1 mtvprvavlp rpkpvfaeav esgggvvvgl dgspdallwl sygrtdelaa vleehpsirw
       61 vqlpwagvdv fapvlaasra dvvwtsakga yaepvaehal alvlallrsl peraraaswg
      121 pkkavtlhra svvivgaggi arellrllav fdcrvtivrr gdepvegavr tlpasrlaea
      181 aadadvlvla aaatagterm vdagllarlp ahavlvnvar gslvdtdalv aalaegrlag
      241 aaldvtdpep lpdghplwse prclitphsa dtpeitapll aervranvaa caaggpfvgr
      301 vdpgsgy
//
LOCUS       WP_258059754             367 aa            linear   BCT 02-MAR-2025
DEFINITION  alanine racemase [Rathayibacter sp. AY1A7].
ACCESSION   WP_258059754
VERSION     WP_258059754.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1A7
  ORGANISM  Rathayibacter sp. AY1A7
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 367)
  AUTHORS   Shaw,J.P., Petsko,G.A. and Ringe,D.
  TITLE     Determination of the structure of alanine racemase from Bacillus
            stearothermophilus at 1.9-A resolution
  JOURNAL   Biochemistry 36 (6), 1329-1342 (1997)
   PUBMED   9063881
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013345.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01168.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Rathayibacter sp. AY1A7"
                     /db_xref="taxon:2080524"
     Protein         1..367
                     /product="alanine racemase"
                     /EC_number="5.1.1.1"
                     /calculated_mol_wt=37386
     Region          20..364
                     /region_name="PLPDE_III"
                     /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
                     Enzymes; cl00261"
                     /db_xref="CDD:469695"
     Site            order(53,55,96,146,179,181,239..242)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate (PLP) binding site [chemical
                     binding]"
                     /db_xref="CDD:143494"
     Site            55
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:143494"
ORIGIN      
        1 mtvdtaaads sarsavldal atpalvldea vldrdiaava aaarerglal rphakthksl
       61 eiarrqlaag avgltvatvs eaevfaaggi rdlfiayplw ldaeragrlr hvlvsarvrv
      121 gvdsaesaer laaalpereg levvveidsg hhrsgvlpae agaiaaaavs agldvagvft
      181 fpghsyaagn gaaaardear alaesvasla asgvearvvs ggstpsaafa dssvltelrp
      241 gvsalgdaqq weigtmtped iavtvlativ srrgdhliad agskvlssdr gaassgfgrl
      301 pehpearipv lsehhatitg vdlpvgtrvr iapnhvcvav nladeyrvll rdgggavwpv
      361 dargrns
//
LOCUS       WP_258059749             900 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Rathayibacter sp. AY1A7].
ACCESSION   WP_258059749
VERSION     WP_258059749.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1A7
  ORGANISM  Rathayibacter sp. AY1A7
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 900)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Rathayibacter sp. AY1A7"
                     /db_xref="taxon:2080524"
     Protein         1..900
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=92750
     Region          66..324
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     Region          351..894
                     /region_name="PRK09274"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:236443"
ORIGIN      
        1 mtaphpaeri rgalgstaaa qlppagldgl dpawsrlvda pdaqgvprrw hlldtggalg
       61 tepvgtvlcv hgnptwsylw rrlaaatles arsggpawrv vavdqlemgf sertgalhtl
      121 adrvrelsnl tdvlglddvv tlghdwggvv slgwavdhpe qlrattllnt aihqsadepi
      181 paplrlalas gvlgastvgt paflettlal ghpalpsavk egyrapyrsa srrggvggfv
      241 adipvdsahp sdpelqriae gvsalttpal mlwgpldpif sdrylddlvd rlphaqvhry
      301 egaghlvaed vdyasavltw lgdlsdgeep fggdpapdvr rptapveplw ahldrnaqdd
      361 slalvemaps ggggprsvsw rllsqrvrel aaglrasgvs pgdrvsllvp pgadltally
      421 aclrigavvv vadaglglrg ltravrgawp dlvvgalpgl tvaralrwpg grvstqtlpr
      481 asaaalgvdt slgqlielgr aelaadpeal geapaadava ailftsgstg pakgvvythr
      541 qlagvrdala rqygigpgtg lvagfapfal lgpalgtrsa tpdmdvtapr tltaaavaaa
      601 aarvdatvlf lspaalanvv atagaldtdd hralagvrtf lsagapvsag llgeaqalmp
      661 nasartpygm tegllltdas legireaasd ddprggvcvg vpaagvrlri apldadgrat
      721 depeeitgtt geivvsaghv edhyerlwlt draarvgavp gerwhrtgdv grmdsagrlw
      781 vegrmphvvv tpdgvvtpvg peqriearva svaraaivga gprgvaqlva vvelrsgarr
      841 vvlaeealaa evraavgrpv aavlvvpalp tdirhnskid raalsrwaeg vlaggpmvap
//
LOCUS       WP_258059800             507 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [Arthrobacter].
ACCESSION   WP_258059800
VERSION     WP_258059800.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter
  ORGANISM  Arthrobacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Arthrobacter"
                     /db_xref="taxon:1663"
     Protein         1..507
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=52048
     Region          16..506
                     /region_name="PRK14995"
                     /note="SmvA family efflux MFS transporter"
                     /db_xref="CDD:184957"
ORIGIN      
        1 mtavqerpai tragkrewwg lavlmlpvll isidnnvlsf aipslsrala psgtqllwiv
       61 diyalvlagl lvpmgslgdr igrrrvlmig svgfgvmslv aafapsasml ilaralmgvf
      121 gamlmpatls lirnifavps qrrvavaiwa agfsggaalg pivggvllen ywwgsvflls
      181 ipvllpllvf gpillpeskd pspgavdapg vvlvmgamls itygiksfas dgaahglpfi
      241 llglvlgtlf vrrqlsrekp mldvrlfrnp vftgsisanl lslfamvgfi fflsqhlqlv
      301 vgqspieagl tmlpglvltv itglavvplv khlrpayvva ggllfnaagy alvffagesv
      361 tvlqlvvafl flgvgvgaae tisndlilas vppsragsas aisetayeig svlgtavlgs
      421 iltaayrngv qvpaglsaeq aesagqtlgg avdaaqalpp eqgsallhsa qaafdsgvsv
      481 tsligvviml vaaagagvll rkapagh
//
LOCUS       WP_258059788             172 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: NUDIX domain-containing protein [unclassified
            Arthrobacter].
ACCESSION   WP_258059788
VERSION     WP_258059788.1
KEYWORDS    RefSeq.
SOURCE      unclassified Arthrobacter
  ORGANISM  unclassified Arthrobacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="unclassified Arthrobacter"
                     /db_xref="taxon:235627"
     Protein         1..172
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=18460
     Region          23..146
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 msgegrrhea sptdrpglia vsyvifrngp svllqrrgtt gyldgfwata aaghveages
       61 avgcavretr eelgltvgad qlaplttlhr kdpgrpdrvd ffflctgwtg qpelqepera
      121 tdlhwfplaa lptlmvpher mvfealsqda vtplltlgfs qdtgtgdaal tc
//
LOCUS       WP_258059768             963 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Rathayibacter sp. AY1A7].
ACCESSION   WP_258059768
VERSION     WP_258059768.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1A7
  ORGANISM  Rathayibacter sp. AY1A7
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 963)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Rathayibacter sp. AY1A7"
                     /db_xref="taxon:2080524"
     Protein         1..963
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=101435
     Region          46..340
                     /region_name="GH43_FsAxh1-like"
                     /note="Glycosyl hydrolase family 43 such as Fibrobacter
                     succinogenes subsp. succinogenes S85 arabinoxylan
                     alpha-L-arabinofuranosidase; cd09001"
                     /db_xref="CDD:350115"
     Site            order(58,83,130..131,176..177,235,294..295,315,317,323)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:350115"
     Region          407..533
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; pfam02018"
                     /db_xref="CDD:396553"
     Region          571..787
                     /region_name="GH43_C2"
                     /note="Beta xylosidase C-terminal Concanavalin A-like
                     domain; pfam17851"
                     /db_xref="CDD:436093"
ORIGIN      
        1 mravastaig allaagllas gaapataaga wspkasytst drgdgtysvp llnadvpdvs
       61 vervpasend dgrdiyymis ttmhlspgap imksydlvnw eivnyvfdrl eigdrfslrn
      121 gqnsygngqw asslryhdgr yyavfntnnl ggsylystdd iedgawtrta lgrafhdpsl
      181 ffddadggtp yifygsgsts avklsedltt vvaeypnilr tsdypgagyl gglfegaqvq
      241 yidgqyyivi itwpsgqgrq valfrssell gryatadgsn pyegkgvlns sgfaqgslvp
      301 iakedgstaw hgmffrdsfp tgripglipa twkdgwptfg tngsvpvggs fpkpirlspe
      361 eelferqksi vvsddfdnda pakayqdesw tippapayda sllgvqllqn pgaesgtapw
      421 agqfgatlsa dttdpasgta alrvgtrtln gsgpsqvlan klqrgvtytv sakvkyttgp
      481 asvrfnlcad fgagpvtmas aavtqgqwtt itgtytvpet anvgsvkfav etpwgnpqpa
      541 sssteylldd vslvgaaptl erptaaeiep ngstlalpwq wnhapdnryw slteregwlr
      601 ltngkvlsgt aahtrlsgsp emtyleearn tlsqrivapk qsaeaafdvs gmkdgdvagl
      661 aaynrgfsyv avkrvdgvtt vgvvnrsqpf attfdqaave sflpgttaal gdasqvrlka
      721 dlelsapagq lwttfsysld gtswtklgsr vgpqtldgql thfmghrlgl fsyatktagg
      781 hvdvdeflls dtlssegkal drsqldaava haatlrsddy padawsdlqs vlakaqavgt
      841 agsqnqidap eralsyqlar lgtlkeasld vtaaaatrci agkvvvtvra tnaddvpval
      901 rmesasgtkt vaalapgatt shafttraas vpaaevvvta tatldgepvt ttvraphpaa
      961 scg
//
LOCUS       WP_258059817             228 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: LysR substrate-binding domain-containing protein
            [unclassified Rathayibacter].
ACCESSION   WP_258059817
VERSION     WP_258059817.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 228)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..228
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=23818
     Region          28..224
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(43..44,46..47,50,54,56..62,157..159,165..166,
                     169..170)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:188886"
ORIGIN      
        1 mlelagpvle asrrleagaa alrqptgslv laasqtiael llprwllefr qrtpevsvql
       61 iagnsatvte lvrsgaaqlg fvetpastat lssdvvtede lavvvapdhp waraasisae
      121 elagtalltr eegsgtrttl eawlhdagla lttpaailet taiiranara giapavmsil
      181 tvetdlaars lirvplrgpa lvrplraiws drigssaaaf leiahemr
//
LOCUS       WP_258059903             505 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Arthrobacter sp. ZGTC212].
ACCESSION   WP_258059903
VERSION     WP_258059903.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC212
  ORGANISM  Arthrobacter sp. ZGTC212
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Arthrobacter sp. ZGTC212"
                     /db_xref="taxon:2058899"
     Protein         1..505
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=52011
     Region          22..478
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(29..30,33..34,37,69,119..120,122..124,127,151,
                     154..155,158,284,287..288,291..293,296,331,335,385..386,
                     390,394,410,413..414,417..418,421)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mkraadvghr slrslgpvvl flalveitsg ilqgyytpil tdiarnlgin dgdvnwfeaa
       61 qlmlsalavp vlaklgdiyg hkrillvstv ltaaaswgva fapdfwtfla awslqgfyvv
      121 wlpleialif srasaapgga altrkaagvl vgalqfgvia galaagflve vfagrlqltl
      181 mipavavtlc iaavqfgvpe tteraggild grgflllafg lllltsglsf lringpgtww
      241 vwgillagaa afvpfvrwel grtdplvdfr mlrdpamwpv qltaglfgis vlgaqapmst
      301 fartdrqmhg yglgldagdv siiigsyvls vligallfpv vsryvtprlt lcgaaalvgf
      361 gyllflpfhd tlaqtltnmi vaglgsgalv aalpsaaata appnrtgmat gltnttktig
      421 gsfasavfgi alasaaadal aggaqraeta aplsgylvvw avcsvtgfia agllllvprl
      481 afadppltaa dpgisvppeg rgang
//
LOCUS       WP_258059963             299 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4097 family beta strand repeat-containing protein [Rathayibacter
            sp. AY1A7].
ACCESSION   WP_258059963
VERSION     WP_258059963.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1A7
  ORGANISM  Rathayibacter sp. AY1A7
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024743.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13349.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Rathayibacter sp. AY1A7"
                     /db_xref="taxon:2080524"
     Protein         1..299
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /calculated_mol_wt=31187
     Region          <101..261
                     /region_name="YvlB"
                     /note="Uncharacterized conserved protein YvlB, contains
                     DUF4097 and DUF4098 domains [Function unknown]; COG3595"
                     /db_xref="CDD:442814"
ORIGIN      
        1 mslekwlvqa getkvidldv vrsvkvalvg gqidviahde ptarvevhsv dgrplkvsmd
       61 gdrleidhvq lrwdtivdvv kglgrrgdra disllvprgv dlkfdtvsad glvsglhsda
      121 rvstvggdiv vdglhgdiev ntvhgelsvr shtgrvtart vsgdvtatge ltrftvdgvs
      181 gsvfvdaegt pdriqantvs gdltirvdeg lgaryrintv sgtlqldgsv vkgtfgrgft
      241 sttgsldskw vdvaansvsg dvvvvrrtva assasvgegw gspgtgpadd rrpmdgssl
//
LOCUS       WP_258059925             423 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Rathayibacter sp. AY1A7].
ACCESSION   WP_258059925
VERSION     WP_258059925.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1A7
  ORGANISM  Rathayibacter sp. AY1A7
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 423)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 423)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02771.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Rathayibacter sp. AY1A7"
                     /db_xref="taxon:2080524"
     Protein         1..423
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=45458
     Region          39..417
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(115,145,147,171,173,400..402,404,406)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mtttapttag adaattigaa aehwsaaprp dspdawlvra eevaavlatd alerdragaa
       61 pfaevallka aglvtllgpa ehgggaqewt talrvvrtva rgdgsigqll gyhylwawaa
      121 rlvgtpeqii aveqlategd llyggavnpr dsdltvreeg delvftgrks fstggvvsdl
      181 tvlegvlegt dthlfaivpt dqegivfgrd wdslgqrlte sgsveirgvr vpwaaaagfv
      241 dkvyrplvyn tlnvpviqqi faefylgiaq galeraaqyt rertrawpyg gddkeragde
      301 wyvlegygdl qsrlwadeal idatgaalsa alhapreelt prrrgeiavr iaaakarive
      361 dglatatrvf eltgarasas svgldlywrn lrthslhdpl pykrrevgvf alldtvpeps
      421 wyt
//
LOCUS       WP_258060024             229 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Rathayibacter sp. AY1A7].
ACCESSION   WP_258060024
VERSION     WP_258060024.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1A7
  ORGANISM  Rathayibacter sp. AY1A7
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Rathayibacter sp. AY1A7"
                     /db_xref="taxon:2080524"
     Protein         1..229
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=24240
     Region          <1..226
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mttvhgfsgp eilpayreal rhprtahlvs isdsdrspel dyaatvhhgi dvdgfpagsg
       61 gedlvilgri hpdkgtaeav riaaaagrrl vicgivqder ywreeveplv dgtrvvyrgs
      121 vgpeeralvl ggalallhpi gfdepfglsv veamacgtpv iayrrgsmae iidegvtgfa
      181 vgslseavaa veraglldra avratarrrf agdrmvdeyl avyagvlgr
//
LOCUS       WP_258060118             995 aa            linear   BCT 02-MAR-2025
DEFINITION  endo-1,4-beta-xylanase [Arthrobacter sp. ZGTC212].
ACCESSION   WP_258060118
VERSION     WP_258060118.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC212
  ORGANISM  Arthrobacter sp. ZGTC212
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012551.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00331.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..995
                     /organism="Arthrobacter sp. ZGTC212"
                     /db_xref="taxon:2058899"
     Protein         1..995
                     /product="endo-1,4-beta-xylanase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=109078
     Region          33..368
                     /region_name="XynA"
                     /note="Endo-1,4-beta-xylanase, GH35 family [Carbohydrate
                     transport and metabolism]; COG3693"
                     /db_xref="CDD:442908"
     Region          396..522
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; pfam02018"
                     /db_xref="CDD:396553"
     Region          530..898
                     /region_name="XynA"
                     /note="Endo-1,4-beta-xylanase, GH35 family [Carbohydrate
                     transport and metabolism]; COG3693"
                     /db_xref="CDD:442908"
ORIGIN      
        1 mkvprlltal fltsalvlpt vpavavqqdg krppgqskqd tlrraapkdf nigsavaggg
       61 hhetqdypdp ftfdkeyrrq laaefnsvsp enqakwefih pekdvyrfae mdsivrfaqk
      121 nkqavrghtl fwhsqnpqwl eqgnfskeel rgilkdhvqt vvgryagkiq qwdvaneifn
      181 ddgtlrtten iwlrelgpdi iadvfqwahe adpsaklffn dfgvedinpk snaylelipr
      241 lqaqgvkvdg faiqghlstr ygfpdalqan lqrfddlgle taiteidvrm divagtepts
      301 eqlaqqadyy qralkaclsv edcnsftiwg ftdkyswvpv fftgegeatv meedftrkpa
      361 yyalrktlkd pssvpddggg sqppptgetp ggvtsgfetg tdgwaargdg vliaqssdar
      421 tgtgsllvtn rsqdwhgaal dvtgalpvga avrisvwakl apgqqpaslk isvqrdnggg
      481 safegvagaa atvtadgwte ltgtytlgaa adkaqvyveg tagvdylldd fslaavpeip
      541 iqtdvpslkd vlgaqgiehv gaaidareta gsaanlmrkh fnaftpenag kpesvqpveg
      601 qftftqldql ldfadannvq vyghvlvwhs qtpewffkdg srdltrnpad rallkarmea
      661 hikgisdhin arypngdspi wawdvvneti adgdtanphd mrdsrwfqil geryvdeafr
      721 ladryfpeak lfindyntem pakradyldl iraleargvp idgvghqahv dvarpvqwle
      781 dsiravekvn pdllqaitel dvnastenqg advggapvdp yspafendad aaaevgyyyr
      841 dlfamlrrqs saidsvtfwg isnarswlrt wpmarpweqp lpfdddlqvt paywgivdpa
      901 klparpadvl apriadqpdv vvyakragra kvsyplpsai dtldgkvpvn csprrggsfa
      961 vgtttvtcta tdaagntrtn sfdvvvkkhr hsgrr
//
LOCUS       WP_258060182             210 aa            linear   BCT 02-MAR-2025
DEFINITION  YqaJ viral recombinase family protein [Rathayibacter rathayi].
ACCESSION   WP_258060182
VERSION     WP_258060182.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter rathayi
  ORGANISM  Rathayibacter rathayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 210)
  AUTHORS   Vellani,T.S. and Myers,R.S.
  TITLE     Bacteriophage SPP1 Chu is an alkaline exonuclease in the SynExo
            family of viral two-component recombinases
  JOURNAL   J Bacteriol 185 (8), 2465-2474 (2003)
   PUBMED   12670970
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021128.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09588.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Rathayibacter rathayi"
                     /db_xref="taxon:33887"
     Protein         1..210
                     /product="YqaJ viral recombinase family protein"
                     /calculated_mol_wt=23931
     Region          28..>197
                     /region_name="COG5377"
                     /note="Phage-related protein, predicted endonuclease
                     [Mobilome: prophages, transposons]"
                     /db_xref="CDD:444142"
ORIGIN      
        1 mqlsfhwetq pvfadaepph lrrvvadssd rvawlrarsr gitatdiarl sspaaigkaa
       61 ldklygtgfg gnaftdhgra repeiaawvr sehaiepsst lfhasqerrh latpdgigvr
      121 ddgrlelcei ktttkpwrsi prhylrqvfw qqyvlgaert lvvweqhrdf vpiegepnsr
      181 wvdrdedeih ilvrlagmlm aelhertrtr
//
LOCUS       WP_258060192             294 aa            linear   BCT 02-MAR-2025
DEFINITION  ROK family protein, partial [Rathayibacter rathayi].
ACCESSION   WP_258060192
VERSION     WP_258060192.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter rathayi
  ORGANISM  Rathayibacter rathayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Rathayibacter rathayi"
                     /db_xref="taxon:33887"
     Protein         1..>294
                     /product="ROK family protein"
     Region          14..253
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mtqpqdgllp rfavgvdigg tsikaslvdv ttgeraarrf avanplgkep edfaaaiagi
       61 vrdvspiagt pvgvgfpgiv rggvvrqtth vsqrwvglda qallseatgv dvvvvndada
      121 agvaerefga mhgregllll ttlgtgigta lvhegvvipn selghlhidg pdfepqvgfs
      181 avrregitle ewagrlgvyy rhlemllspq lfviggaaah vfdefarfld igteivparf
      241 gndagftgaa mvavspdrla pwyrstrgar esgvvaeagr ddlgadveea gelv
//
LOCUS       WP_258060194             222 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Arthrobacter sp. ZGTC212].
ACCESSION   WP_258060194
VERSION     WP_258060194.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC212
  ORGANISM  Arthrobacter sp. ZGTC212
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Arthrobacter sp. ZGTC212"
                     /db_xref="taxon:2058899"
     Protein         1..>222
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          22..>173
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 msettkrrvn vaalmtalla acmafqlnas mlspalltie eelnttsaav altqtaffta
       61 aalfslflpr lgdiigrkkv lggmlvvlti gsvvaalaps ievlflarli qgvsgptval
      121 smimlrveir epklygtlmg viaavnggia gvdaiaggyl aqnhgfasvf wtmaavgvla
      181 aalvivvvpe ssaavkakmd wvgvvplvis vgtlltafne ag
//
LOCUS       WP_258060197             656 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase [Arthrobacter sp. ZGTC212].
ACCESSION   WP_258060197
VERSION     WP_258060197.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC212
  ORGANISM  Arthrobacter sp. ZGTC212
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Arthrobacter sp. ZGTC212"
                     /db_xref="taxon:2058899"
     Protein         1..656
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=67635
     Region          159..437
                     /region_name="Peptidases_S8_13"
                     /note="Peptidase S8 family domain, uncharacterized
                     subfamily 13; cd07496"
                     /db_xref="CDD:173820"
     Site            order(166,225,229,296..298,324,326..327,405)
                     /site_type="active"
                     /db_xref="CDD:173820"
     Site            order(166,225,405)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173820"
     Region          533..578
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          599..644
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
ORIGIN      
        1 mkisssrlll ravtgaaall llsgplvaap asangtsdav ppsryivtfa draaassitr
       61 eqtyldagsp vgaavtelhl tgsggtvvev dpdltveeta avvsalaadp dvervepdvl
      121 lypsavtpnd plyprqwnlq gagggadaap awtsstgkgq vvavvdtgit ahtdlqaqvl
      181 pgydlisdpa vagdgngrda dprdegdwyp ngscgrtvgs astwhgthvs gvvaasanng
      241 tgisgvapga qilpvrtlgt cggymsdisd giiwaaggql pgvplnptpa rvinlslggv
      301 stcsaamqqa vnfaaergav vvaaagndsi sadrsqpanc dnvmvvgatd rngsrapysn
      361 fgplvdlmap ggntmgdssg gilstinngk svpadegyay yqgtsmaaph vagaaallls
      421 adpgltsqqv estllqtare lpgsctphcg pqllnisaav aavaspfadv pksmqfyddm
      481 rwmaeagist gwtetngtst yrplesvnrd amaafmyrla gspaftppqk spfadvstgn
      541 qfykeiswla aeeistgwle sngtktyrpl qpvnrdamaa fmyryadspa ytvpvkspfa
      601 diaktnqfyk eiswlastgi stgwaggngt styrplssvk rdamaafmhr fdtrfn
//
LOCUS       WP_258060224             284 aa            linear   BCT 02-MAR-2025
DEFINITION  ROK family protein, partial [Rathayibacter rathayi].
ACCESSION   WP_258060224
VERSION     WP_258060224.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter rathayi
  ORGANISM  Rathayibacter rathayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Rathayibacter rathayi"
                     /db_xref="taxon:33887"
     Protein         1..>284
                     /product="ROK family protein"
     Region          14..253
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mtqpqdgllp rfavgvdigg tsikaslvdv ttgeraarrf avanplgkep edfaaaiagi
       61 vrdvspiagt pvgvgfpgiv rggvvrqtth vsqrwvglda qallseatgv dvvvvndada
      121 agvaerefga mhgregllll ttlgtgigta lvhegvvipn selghlhidg pdfepqvgfs
      181 avrregitle ewagrlgvyy rhlemllspq lfviggaaah vfdefarfld igteivparf
      241 gndagftgaa mvavspdrla pwyrstrgar esgvvaeagr ddlg
//
LOCUS       WP_258060278             441 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: PIG-L family deacetylase [unclassified Arthrobacter].
ACCESSION   WP_258060278
VERSION     WP_258060278.1
KEYWORDS    RefSeq.
SOURCE      unclassified Arthrobacter
  ORGANISM  unclassified Arthrobacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 441)
  AUTHORS   Handa,N., Terada,T., Kamewari,Y., Hamana,H., Tame,J.R., Park,S.Y.,
            Kinoshita,K., Ota,M., Nakamura,H., Kuramitsu,S., Shirouzu,M. and
            Yokoyama,S.
  TITLE     Crystal structure of the conserved protein TT1542 from Thermus
            thermophilus HB8
  JOURNAL   Protein Sci 12 (8), 1621-1632 (2003)
   PUBMED   12876312
REFERENCE   2  (residues 1 to 441)
  AUTHORS   Watanabe,R., Ohishi,K., Maeda,Y., Nakamura,N. and Kinoshita,T.
  TITLE     Mammalian PIG-L and its yeast homologue Gpi12p are
            N-acetylglucosaminylphosphatidylinositol de-N-acetylases essential
            in glycosylphosphatidylinositol biosynthesis
  JOURNAL   Biochem J 339 (Pt 1) (Pt 1), 185-192 (1999)
   PUBMED   10085243
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014625.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02585.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="unclassified Arthrobacter"
                     /db_xref="taxon:235627"
     Protein         1..441
                     /product="PIG-L family deacetylase"
                     /calculated_mol_wt=47974
     Region          37..221
                     /region_name="LmbE"
                     /note="N-acetylglucosaminyl deacetylase, LmbE family
                     [Carbohydrate transport and metabolism]; COG2120"
                     /db_xref="CDD:441723"
     Region          259..401
                     /region_name="COG4976"
                     /note="Predicted methyltransferase, contains TPR repeat
                     [General function prediction only]"
                     /db_xref="CDD:444001"
ORIGIN      
        1 msfshlddsv pearwlsave grsyldparl wphgtgrlvv laahpddetl gagglialta
       61 argiavdvvv atageashpd sptfsaeqla rvrrvelrda vallapgatv hfldlpdggl
      121 arhrseldaa laaivgsaak entvlaapwr sdghtdhdta gqaaaalart mglplleypi
      181 wlwhwgqpgd vpenlvllpl gdaaaakkra mdahvtqvrp lspapgdeal lspavlahfe
      241 rsfesfalst prpprevfed lyqsssdpwh fedsfyehrk ralclamlpr pqfsavfepg
      301 csigvftrel agradavlat disdralela rqrlasaghv rmeqgtvped wppgrydlvv
      361 vseigyflqh saleeliert sesltddgvv llchwrhpne gweltgdqvh eafrarsglq
      421 iiaehreqdf ridvlartea p
//
LOCUS       WP_258060306             334 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DAK2 domain-containing protein [unclassified
            Arthrobacter].
ACCESSION   WP_258060306
VERSION     WP_258060306.1
KEYWORDS    RefSeq.
SOURCE      unclassified Arthrobacter
  ORGANISM  unclassified Arthrobacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014754.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02734.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="unclassified Arthrobacter"
                     /db_xref="taxon:235627"
     Protein         1..334
                     /product="DAK2 domain-containing protein"
                     /GO_function="GO:0004371 - glycerone kinase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006071 - glycerol metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=35091
     Region          8..>333
                     /region_name="YloV"
                     /note="Predicted kinase related to dihydroxyacetone kinase
                     [General function prediction only]; COG1461"
                     /db_xref="CDD:441070"
ORIGIN      
        1 mqtkitanaq alkrwlsnae vslgnhsdrl nainifpvad gdtgtnlylt lrsasraiad
       61 vdtadigell aiagraamed akgnsgtlls vfltamaepl qgstrlsapl latalhraql
      121 rswsvlsdpv pgtmlsvlee aaraamdaea aqsgddsnvg laatlravmn aalaavvnte
      181 lqldaltqar vvdaggvgfl lvldalrasa lgeelqeell dglhgydvqa phihstmprm
      241 egvevmctit lspldaatlr lqldevgdsv imsavnavge gyrwrvhvht pdagtaidll
      301 rtvgepmnlt vtelsadghe tkeiiseihe ahev
//
LOCUS       WP_258060328             378 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Rathayibacter sp. AY1A3].
ACCESSION   WP_258060328
VERSION     WP_258060328.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1A3
  ORGANISM  Rathayibacter sp. AY1A3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 378)
  AUTHORS   Todone,F., Vanoni,M.A., Mozzarelli,A., Bolognesi,M., Coda,A.,
            Curti,B. and Mattevi,A.
  TITLE     Active site plasticity in D-amino acid oxidase: a crystallographic
            analysis
  JOURNAL   Biochemistry 36 (19), 5853-5860 (1997)
   PUBMED   9153426
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013434.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01266.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Rathayibacter sp. AY1A3"
                     /db_xref="taxon:2080521"
     Protein         1..378
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=40841
     Region          6..367
                     /region_name="solA"
                     /note="N-methyl-L-tryptophan oxidase; PRK11259"
                     /db_xref="CDD:236887"
ORIGIN      
        1 mrenvdtvvi gggamgsata wqlaqrgtdv vlleqfgpgh engashgrtr nfneayaadd
       61 yldllgeasr lwdrlsveeg ttlldrvglv nlgpvgplra vreahrargv aselisaaea
      121 rdrwpalrfe sevlhvpssg rvraadalla lragaerrga rfrydtavrg idvvgpdtvi
      181 vttddteyra rrvvvtagaw tqpllaglvp lrplrvseeh pahfrlrmpd aawpsfnhtp
      241 dpdradhayf lspvygmltp geglkvgwhg vgrsvdpdar trrpvaeqla alrryvaewi
      301 pgadaevcdv isctytmtrn edfildrngp ivvgagfsgh gfkftpaigr vladlsegva
      361 aprrfaatar pvlagpvl
//
LOCUS       WP_258060366             426 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: acyl-CoA dehydrogenase family protein [unclassified
            Arthrobacter].
ACCESSION   WP_258060366
VERSION     WP_258060366.1
KEYWORDS    RefSeq.
SOURCE      unclassified Arthrobacter
  ORGANISM  unclassified Arthrobacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 426)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 426)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 426)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="unclassified Arthrobacter"
                     /db_xref="taxon:235627"
     Protein         1..426
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=46188
     Region          49..425
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(134,164,166,197,199,403..405,407,409)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mtagianqpe itepseamet peatgfsfdp tavqdvdsdl ylldnlldeq ardvqrrvra
       61 fvdndllpvi ndyweraevp yelipklaal niaggtiqgh gcpgltrlaa staaaelarg
      121 dgsintffgv hsglamgsid mlgseeqkqr wlppmarfek igafaltepe hgsdsvslet
      181 sarregdeyv lngskrwign asfadvviiy ardeadgavk afvmekdgeg nhpagynatv
      241 itgkigkrav lqpnitiedl ripaenrlen cnsfkdvnkv laatrggvaw ealghavaay
      301 eiavayaktr vqfgkeigrf qlvqnklanm laqltaiklt cfrlnelade gsmtspmasm
      361 akmfaarqgr wicseardim ggnglllenh varhltdmev vftyegtdsm qslilgrhit
      421 gfsafa
//
LOCUS       WP_258060380             428 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [unclassified Arthrobacter].
ACCESSION   WP_258060380
VERSION     WP_258060380.1
KEYWORDS    RefSeq.
SOURCE      unclassified Arthrobacter
  ORGANISM  unclassified Arthrobacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="unclassified Arthrobacter"
                     /db_xref="taxon:235627"
     Protein         1..428
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=41987
     Region          28..418
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(35..36,39..40,43,75,128..129,131..133,136,155,
                     158..159,162,250,253..254,257..259,262,289,293,344..345,
                     349,353,369,372..373,376..377,380)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mnrapdaggp aldeatrarv qrrtltvvim sqvlggagla agvtvgalla qemlgsdgla
       61 glpaglftlg saltaylvgr vtqrsgrrvg lgagfaagga galgvvlaav vdspallfaa
      121 lfvygagtat nlqaryagtd lapparrgqa isiamvsttl gavagpnlvt pmgrladglg
      181 ipalagpfll agaaylaagv vllallrpdp fllarrlnag aaddgaaaag aaapaparpg
      241 ngayagaavm vltqiamvai mtmtpvhmrv hhhgladvgl vigihigamy lpslvtgvlv
      301 drvgrlpmaa aagvtlllag ltaalapges lgllilalal lglgwnfgli agtalvvdht
      361 apeirpqvqg ridvlvalag agggmlsgvv magtsyatla lsggilalll ipvlvwarrt
      421 pvaeaagr
//
LOCUS       WP_258060392             514 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rathayibacter sp. AY1A3].
ACCESSION   WP_258060392
VERSION     WP_258060392.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1A3
  ORGANISM  Rathayibacter sp. AY1A3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Rathayibacter sp. AY1A3"
                     /db_xref="taxon:2080521"
     Protein         1..514
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=51622
     Region          23..470
                     /region_name="PRK14995"
                     /note="SmvA family efflux MFS transporter"
                     /db_xref="CDD:184957"
ORIGIN      
        1 msartapvst hdtagaadrv grrawvalav lmlpvllvsv dntvlnfalp siaedlgpsg
       61 iellwivday plvlagllva mgslgdrvgr rrlllvgavg faavsvvaaf aptaaaliga
      121 raalgffgam lmpstlsllr svfpdrdqrr laiaiwatgf avgsgvgplv ggvllehfpw
      181 gsvfllavpv llplvvlvpi lvpesrdpqp gpvdvvsill slatmapvvy avksfaehgi
      241 davgvaalvv gvvsgalfvr rqqrraspml dlslfrrgsf saaivvnlls vtalvgglff
      301 lsqhlqlvvg lspleaglvl vpglavmila glgvvpiarr vaprlvvpag llvsavgyil
      361 lalgsgapgg asaltvaaaf aflglgigaa etvsnelila napadkagaa savsetayel
      421 gavlgtatlg tvltavyrgg vvlpegldva qaqragetlg gavsvagelp adsaaslvas
      481 asaafdsgvg wsawlgvvlv laaaavgawr lrrs
//
LOCUS       WP_258060458             280 aa            linear   BCT 02-MAR-2025
DEFINITION  ROK family protein [Rathayibacter sp. AY1A3].
ACCESSION   WP_258060458
VERSION     WP_258060458.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1A3
  ORGANISM  Rathayibacter sp. AY1A3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Rathayibacter sp. AY1A3"
                     /db_xref="taxon:2080521"
     Protein         1..280
                     /product="ROK family protein"
                     /calculated_mol_wt=29271
     Region          14..253
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mtqphdgllp rfavgvdigg tsikaslvdv ttgeraarrf avanplgkep edfaeaiagi
       61 vrdvspiagt pvgvgfpgiv rggvvrqtth vsqrwvglda qallseatgv dvvvvndada
      121 agvaerefga mrgregllll ttlgtgigta lvhegvvipn selghlhidg pdfepqvgfs
      181 avrregitle ewagrlsvyy rhlemllspq lfviggaaah vfdefarfld igteivparf
      241 gndagftgaa mvavspdrla pwyrsthgar ldpgapaiad
//
LOCUS       WP_258060483             414 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: glycosyltransferase [unclassified Rathayibacter].
ACCESSION   WP_258060483
VERSION     WP_258060483.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..414
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=44746
     Region          20..395
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 msdprdasrp gspdsrpltv vigcdtfapd vngaakfaer laaglaqrgh evhvvapsad
       61 gwsgtrveth egqriivhrl yswrwyphdw lrfampwrir qnsarildev kpdvvhfqsh
      121 iivgrglgie aakrgirivg tnhfmpenml eftllpkavq akavamawra arrtfgraea
      181 vttptrkaaq flekytglrg vhaiscgida dnytpdfsar agdsilfvgr vtgekhidvl
      241 lravalldpa ldakleivgg gdqmrnlqql aatlgiadrv rftgyvsdae lkeaytratv
      301 fampsiaelq siatmeamas alpvvaadam alphlvhdge ngylfapgsa ealaerltav
      361 ltadqedlea mkraslriva shdinrtist feslyrgepv adpasdaasa paat
//
LOCUS       WP_258060485             289 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ATP-binding cassette domain-containing protein
            [unclassified Rathayibacter].
ACCESSION   WP_258060485
VERSION     WP_258060485.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 289)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 289)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 289)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 289)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..289
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=31050
     Region          <2..269
                     /region_name="GsiA"
                     /note="ABC-type glutathione transport system ATPase
                     component, contains duplicated ATPase domain
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1123"
                     /db_xref="CDD:440740"
ORIGIN      
        1 msrtaedqap ivvddlsvey pprgisrrwt alrgvslrve pgevlgilgg sgsgkstlar
       61 vlggdglghd ggrtrpviig gdatvaghrl rslparelkr ftvdvahlaq dagaalrpel
      121 tvseliaepi flrdrhydpk aaavrvatll dsvhlplfll drypyelssg qrqrvavars
      181 lvlgpkvlia deptsgidat vresivdlla dlrrregfaa vvvshdidvl sratdriavl
      241 vggevvaygp llevliearh pyvrelgaaf aeyerfdasr aqrveaadq
//
LOCUS       WP_258060538             363 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: glycosyltransferase [unclassified Arthrobacter].
ACCESSION   WP_258060538
VERSION     WP_258060538.1
KEYWORDS    RefSeq.
SOURCE      unclassified Arthrobacter
  ORGANISM  unclassified Arthrobacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="unclassified Arthrobacter"
                     /db_xref="taxon:235627"
     Protein         1..363
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=39258
     Region          2..345
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mggaetllrg llrewkddeh hvlvledrgv fsdaveevas svthlgckks ikslgkmlrg
       61 lratvrrlrp davhshlvqs dlvsllcpmp gvrrytsihi ssmgpldplk srivakival
      121 lskkftgaia tsdrsidyme svgyrckavv inngtprvdp idykpaqctf lslarfhgvk
      181 ghavlvaafa rhvqrhpssr licagagvtl enpefvasvg kssqelsdag kasflgpetd
      241 irslfsrasa lvissvgtet fpmvgseacm hgvpvittdv ggakafamde rwvvqpgsva
      301 llenamnnfa evsvqerael seksrrrals dfdlsevaak yealylefpt grvdysgigh
      361 ern
//
LOCUS       WP_258060570             423 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: acyl-CoA dehydrogenase family protein [unclassified
            Rathayibacter].
ACCESSION   WP_258060570
VERSION     WP_258060570.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 423)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 423)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02771.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..423
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=45472
     Region          39..417
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(115,145,147,171,173,400..402,404,406)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mtttapttag adaattigaa aehwsaaprp dspdawlvra eevaavlatd alerdragaa
       61 pfaevallka aglvtllgpa ehgggaqewt talrvvrtva rgdgsigqll gyhylwawaa
      121 rlvgtpeqii aveqlategd llyggavnpr dsdltvreeg delvftgrks fstggvvsdl
      181 tvlegvlegt dthlfaivpt dqegivfgrd wdslgqrlte sgsveirgvr vpwaaaagfv
      241 drvyrplvyn tlnvpviqqv faefylgiaq galeraaqyt rertrawpyg gddkeragde
      301 wyvlegygdl qsrlwadeal idatgaalsa alhapreelt prrrgeiavr iaaakarive
      361 dglatatrvf eltgarasas svgldlywrn lrthslhdpl pykrrevgvf alldtvpeps
      421 wyt
//
LOCUS       WP_258060613             288 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Rathayibacter sp. AY1A3].
ACCESSION   WP_258060613
VERSION     WP_258060613.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1A3
  ORGANISM  Rathayibacter sp. AY1A3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Rathayibacter sp. AY1A3"
                     /db_xref="taxon:2080521"
     Protein         1..288
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=30166
     Region          5..287
                     /region_name="PRK12748"
                     /note="3-ketoacyl-(acyl-carrier-protein) reductase;
                     Provisional"
                     /db_xref="CDD:237189"
ORIGIN      
        1 msallplqgr talvtgvsrr rgigfavaak laslgahlvv hhhrphdldl pwggddldav
       61 rselrahlte garfadvaad ladpstipgl iataadltgs ldvlvcnhak sgddgsildm
      121 tperltafwd vntrstlllt aefarlrapr tdgprrpgdr vvgagpyara qghvfwmtsg
      181 qihgamrgev ayaaskaala gvtatvaael lelgivlnti dpgpvntgyl dpettdrsle
      241 dleeyvastp fgrvgtpadp aeliawlats arswvvgqvl ttdggfsl
//
LOCUS       WP_258060639             342 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Rathayibacter sp. AY1A3].
ACCESSION   WP_258060639
VERSION     WP_258060639.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1A3
  ORGANISM  Rathayibacter sp. AY1A3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Rathayibacter sp. AY1A3"
                     /db_xref="taxon:2080521"
     Protein         1..342
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=35046
     Region          22..289
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mgalalagcs gsgssdepda pslvvstfpf gveefqeavi dpfteatgie vevetgsnsd
       61 rlsqlqlagg ddpgvdvmli sdyyaalgqk ddlfqqvdaa svpaladvaa fateesylgp
      121 aysyqlngtl ystdaltadq aaqwsvysdp anagkvalpd isvtagqlmv sgvaategsg
      181 pydidaalst ladwapgvlq fyssstevtn lltqgeivaa dalsgfatdl vasgepigwt
      241 ppatgrymat nramiptgaa nvdaaeqfid yllsveaqts saaivgdlpv nlsaevpdti
      301 tavvgdiaad ptaagystld paelvptrse wvdrfarevt aq
//
LOCUS       WP_258060647             541 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Arthrobacter sp. 4R501].
ACCESSION   WP_258060647
VERSION     WP_258060647.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. 4R501
  ORGANISM  Arthrobacter sp. 4R501
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 541)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 541)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 541)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 541)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Arthrobacter sp. 4R501"
                     /db_xref="taxon:2058886"
     Protein         1..541
                     /product="ATP-binding protein"
                     /calculated_mol_wt=57964
     Region          1..>127
                     /region_name="AmiR"
                     /note="Two-component response regulator, AmiR/NasT family,
                     consists of REC and RNA-binding antiterminator (ANTAR)
                     domains [Signal transduction mechanisms, Transcription];
                     COG3707"
                     /db_xref="CDD:442921"
     Region          138..275
                     /region_name="GAF"
                     /note="GAF domain; pfam01590"
                     /db_xref="CDD:460259"
     Region          <302..531
                     /region_name="WalK"
                     /note="Sensor histidine kinase WalK [Signal transduction
                     mechanisms]; COG5002"
                     /db_xref="CDD:444026"
ORIGIN      
        1 mpylavvadp dagrreftra aleaagftvk tagdaaslsa lldqrepsvl ildsslsdvd
       61 atapvlvlvd ldspaevksv ehagvrdsia kppaakelvh ratalinlvs rrnearqeae
      121 tlrerlrqvs aavrgtnhpq qiadfvvrgf getfgadrvw lttfdddrvp pitaqwqrpg
      181 laplpeglft dedpvrrtad alwsraealt adgafaplgt gdvqlpaela klraaasvav
      241 pmgdgssslg iiwiallnsp rewsraelal iqhvagntah gliqshlits qqqvvkqlqq
      301 ldkaktdfla tvnhelrtpl tsimayldmi qentsdpvss evhqmldivv rnterlrlli
      361 edmlsvsrng heqsplhltp vrlartleiv taalrplatv qnvaivmaha sedqeilade
      421 vqlqqvftnl vsnaikftps ggqidvvslt radadgtrwa tvsvsdsgig issdeiahif
      481 trfyrasnam sgavpgtglg laitqdivqr hggridvtse lgvgttvtvn lrlgahashg
      541 t
//
LOCUS       WP_258060687             616 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase [Arthrobacter sp. 4R501].
ACCESSION   WP_258060687
VERSION     WP_258060687.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. 4R501
  ORGANISM  Arthrobacter sp. 4R501
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Arthrobacter sp. 4R501"
                     /db_xref="taxon:2058886"
     Protein         1..616
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=60403
     Region          <61..109
                     /region_name="Inhibitor_I9"
                     /note="Peptidase inhibitor I9; pfam05922"
                     /db_xref="CDD:428674"
     Region          118..370
                     /region_name="Peptidases_S8_PCSK9_ProteinaseK_like"
                     /note="Peptidase S8 family domain in ProteinaseK-like
                     proteins; cd04077"
                     /db_xref="CDD:173790"
     Site            order(121,124..125)
                     /site_type="other"
                     /note="calcium binding site 2 [ion binding]"
                     /db_xref="CDD:173790"
     Site            order(149,182,243..244,271,333,336)
                     /site_type="active"
                     /db_xref="CDD:173790"
     Site            order(149,182,336)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173790"
     Site            order(285,287,310)
                     /site_type="other"
                     /note="calcium binding site 1 [ion binding]"
                     /db_xref="CDD:173790"
     Region          407..507
                     /region_name="Big_5"
                     /note="Bacterial Ig-like domain; pfam13205"
                     /db_xref="CDD:463809"
     Region          510..613
                     /region_name="Big_5"
                     /note="Bacterial Ig-like domain; pfam13205"
                     /db_xref="CDD:463809"
ORIGIN      
        1 mrtfrfvlpa aamlisaval tasglpaaav applapagnd asvrylvrft aetdvpaeaa
       61 rlksqgigvg rsfshalrga vvtatpaqaa alsreagvas vevdapitls atqqpapwgl
      121 drvdqrplpl sgsytwtaag tgvsayvvdt gvlashsdfa grvaagwtav adgrgsgdcn
      181 ghgthvagtv agttygvaka ativpvrvld csgsgfnsdv vagldwiaan haagtpavvn
      241 mslggvasaa vdsalqgvin dgvtavvaag nsaadacgss parlpaavtv aasdsadrqa
      301 sfsnfgscvd lyapgvgivs asyssatata smsgtsmaap htagaaalll sqnpaltpaq
      361 vaaslasnat agaitgigtg tpnrllyaaa aapapapapd pvapaptvta kspaaqstav
      421 pvasnvtatf skavqgvgag tftlrnaagt avpatvsyna ttktatldpt anlaadvtft
      481 atlvggatai rdtagtplas tswtfttgpa ptvtgftpgs nsvlvrrnnn lsvtfsepvq
      541 gvsaatftvk naytgavvta avfrngttnq wildpqntla aktkytvtvt gggtsirdla
      601 gnqlatktwq fttgsf
//
LOCUS       WP_258060702             153 aa            linear   BCT 02-MAR-2025
DEFINITION  HAD family hydrolase [Arthrobacter sp. 4R501].
ACCESSION   WP_258060702
VERSION     WP_258060702.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. 4R501
  ORGANISM  Arthrobacter sp. 4R501
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Osman,C., Haag,M., Wieland,F.T., Brugger,B. and Langer,T.
  TITLE     A mitochondrial phosphatase required for cardiolipin biosynthesis:
            the PGP phosphatase Gep4
  JOURNAL   EMBO J 29 (12), 1976-1987 (2010)
   PUBMED   20485265
REFERENCE   2  (residues 1 to 153)
  AUTHORS   Hisano,T., Hata,Y., Fujii,T., Liu,J.Q., Kurihara,T., Esaki,N. and
            Soda,K.
  TITLE     Crystal structure of L-2-haloacid dehalogenase from Pseudomonas sp.
            YL. An alpha/beta hydrolase structure that is different from the
            alpha/beta hydrolase fold
  JOURNAL   J Biol Chem 271 (34), 20322-20330 (1996)
   PUBMED   8702766
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012905.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00702.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Arthrobacter sp. 4R501"
                     /db_xref="taxon:2058886"
     Protein         1..153
                     /product="HAD family hydrolase"
                     /calculated_mol_wt=15735
     Region          <1..147
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
ORIGIN      
        1 melnrpldaa vdhvmgglag lgvhsdvpeg iralaaagfr litlsngsar iaeqlfsevg
       61 irdafeslls vegapawkpa rasyeyaaaa sgsdpagmll vavhpwdihg aaraglrtaw
      121 lnrtggsypg yfeapeftvt altdlpaala aah
//
LOCUS       WP_258060716             393 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rathayibacter rathayi].
ACCESSION   WP_258060716
VERSION     WP_258060716.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter rathayi
  ORGANISM  Rathayibacter rathayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Rathayibacter rathayi"
                     /db_xref="taxon:33887"
     Protein         1..393
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=40722
     Region          13..382
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(15,47,105..106,108..110,113,133,136..137,140,215,
                     218..219,222..224,227,255,259,311..312,316,320,336,
                     339..340,343..344,347)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 maaqasfaaa fagipvtgtl lrtayhlttg elgvvlaail lgvaaseivw glftdmfgdr
       61 rvlliglist glvfvvmavf vvpsearvps vwllagglll vgllggsvns ssgravmlwf
      121 tdgqrgfams vrqtaipagg aigaallpwl aafsgfravf lvlagfclat alatarwlre
      181 preepnpvgp iaagdpaqgr splvrwdcwr ialasalltm pqiailgfag iylhdvkhad
      241 livisatilt vqvggavlrv wsgrytdrkg nrrrfvavig lltggsllaa vsllwaptvv
      301 valalvvagi lanswhgvay temavmagts ragaalglen ttaftgafvt pllvplllai
      361 gswplawtvi aiaplvavpl vprtisavtt rhd
//
LOCUS       WP_258060732             493 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-propeller fold lactonase family protein [Arthrobacter sp.
            4R501].
ACCESSION   WP_258060732
VERSION     WP_258060732.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. 4R501
  ORGANISM  Arthrobacter sp. 4R501
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 493)
  AUTHORS   Kajander,T., Merckel,M.C., Thompson,A., Deacon,A.M., Mazur,P.,
            Kozarich,J.W. and Goldman,A.
  TITLE     The structure of Neurospora crassa 3-carboxy-cis,cis-muconate
            lactonizing enzyme, a beta propeller cycloisomerase
  JOURNAL   Structure 10 (4), 483-492 (2002)
   PUBMED   11937053
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021778.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10282.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Arthrobacter sp. 4R501"
                     /db_xref="taxon:2058886"
     Protein         1..493
                     /product="beta-propeller fold lactonase family protein"
                     /calculated_mol_wt=49726
     Region          132..400
                     /region_name="PQQ_ABC_repeats"
                     /note="PQQ-dependent catabolism-associated beta-propeller
                     protein; TIGR03866"
                     /db_xref="CDD:274824"
     Region          246..283
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          287..324
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          332..364
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
ORIGIN      
        1 mpaqktgtdy rvpevclvyk lrieplyrhe rdttdfafhm qedlmrfitg lsrrhrgrrs
       61 apskkgpgag nprfrrgtsa sllfrrravi smilaalmlv gnipataagt vtstipvgsl
      121 pagvaftpdg stayvintgs dtvsvidvas gtvtstipag snpggvaftp dgstayvtnn
      181 asdtvsvidv asgtvtstip lgsnpvgvaf tpdgsrayvt qsdsvsvidv asgtvtstip
      241 vgpgpnsvaf tpdgstayvt ntasdtvsvi tvasgtvtst itvgsepvgi aftpdgsaay
      301 vtdngfrtvs vidvasgtvt stitvgshpy gvaftpdgst ayvtndgsds vsvisvvsgt
      361 vtstipagsn ptgvaftpdg stayvtnygs ntvsvidvns appvftadtp ptktttraay
      421 sytftttgdp aptfcvssga lpaglsldss tgvlsgtptk agkatfkvta tngvspdavt
      481 srititvtkg kvr
//
LOCUS       WP_258060462             731 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase domain-containing protein [Rathayibacter sp.
            AY1A3].
ACCESSION   WP_258060462
VERSION     WP_258060462.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1A3
  ORGANISM  Rathayibacter sp. AY1A3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 731)
  AUTHORS   Naumoff,D.G.
  TITLE     GH97 is a new family of glycoside hydrolases, which is related to
            the alpha-galactosidase superfamily
  JOURNAL   BMC Genomics 6, 112 (2005)
   PUBMED   16131397
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 731)
  AUTHORS   Liu,Y., Choudhury,P., Cabral,C.M. and Sifers,R.N.
  TITLE     Oligosaccharide modification in the early secretory pathway directs
            the selection of a misfolded glycoprotein for degradation by the
            proteasome
  JOURNAL   J Biol Chem 274 (9), 5861-5867 (1999)
   PUBMED   10026209
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019583.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07971.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Rathayibacter sp. AY1A3"
                     /db_xref="taxon:2080521"
     Protein         1..731
                     /product="glycoside hydrolase domain-containing protein"
                     /calculated_mol_wt=79642
     Region          2..725
                     /region_name="COG3537"
                     /note="Putative alpha-1,2-mannosidase [Carbohydrate
                     transport and metabolism]"
                     /db_xref="CDD:442758"
ORIGIN      
        1 mdpflgteat alaeptglaa twwspkpqig nthpgatypl gmvsacsysg ayptgygryd
       61 lalegvpptl hdgleasgft hfqqsgtgai rkyynylrvt pmlepldelg cswaledeva
      121 epgyyaatls sgvraeltvg pasvvhrytf pehrsarvvv dlslgglaip sgatvplraq
      181 lhsispgvaa gevvmegapl avhlecdalq wrqmlwydrr lmpggtrldf dhirpttlrp
      241 fglmwagpst agqtvelrmg fslrgtdrar enlnrdvppa gtgfdqrrdr trktwrkrlr
      301 tiavdtpsae retvfstaly hslikpclap sespfwptdg pfvfdistmw diyrtqlpll
      361 tmllperave iaaalltice eegnfpigyr makgsdrfsr qgsalahtfl adlcrlglpg
      421 idwdaalvhm sedlkrmyge eflaageahp ishtldlahg ywctavvarh vgdlelaeql
      481 eeraaqwvna fdlrsgllkd styyegtrhn ysfrllhdma grialsggde gfvaqldeff
      541 gygaepvvqp glrperseml agaelgrfeg lnnepdmdsp wayhyagrpd rtaeivhgvl
      601 hqrfgagrgg lpgnddsggl sswyvwaslg lfpvagqglv lvnapsfara svaiggadle
      661 irttgfvepe aggpvqyves aefdgapllt svltaaalhr ggelllhlgp epsdwgtlpe
      721 hrppswparr h
//
LOCUS       WP_258060759             185 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6993 domain-containing protein [Arthrobacter sp. 4R501].
ACCESSION   WP_258060759
VERSION     WP_258060759.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. 4R501
  ORGANISM  Arthrobacter sp. 4R501
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046846.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22504.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Arthrobacter sp. 4R501"
                     /db_xref="taxon:2058886"
     Protein         1..185
                     /product="DUF6993 domain-containing protein"
                     /calculated_mol_wt=17837
     Region          48..>138
                     /region_name="kgd"
                     /note="multifunctional oxoglutarate
                     decarboxylase/oxoglutarate dehydrogenase thiamine
                     pyrophosphate-binding subunit/dihydrolipoyllysine-residue
                     succinyltransferase subunit; cl39092"
                     /db_xref="CDD:476867"
ORIGIN      
        1 mnratdtrqa tpitsratrs rrfgpaagra paalagsllm vlalaactgg sptatgtgaa
       61 tpgevatssg mattgstqpa atppaeypat avmkqtvtda lgrlaagtpk pataqvtdal
      121 tgagippaav evsasrtptg leadaieaav lqgtdcvvgq vrdgkvtviv lpvlasgrcf
      181 vgaaa
//
LOCUS       WP_258060816              77 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Rathayibacter rathayi].
ACCESSION   WP_258060816
VERSION     WP_258060816.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter rathayi
  ORGANISM  Rathayibacter rathayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 77)
  AUTHORS   Mullin,D.A., Zies,D.L., Mullin,A.H., Caballera,N. and Ely,B.
  TITLE     Genetic organization and transposition properties of IS511
  JOURNAL   Mol Gen Genet 254 (4), 456-463 (1997)
   PUBMED   9180700
REFERENCE   2  (residues 1 to 77)
  AUTHORS   Fischer,J., Maier,H., Viell,P. and Altenbuchner,J.
  TITLE     The use of an improved transposon mutagenesis system for DNA
            sequencing leads to the characterization of a new insertion
            sequence of Streptomyces lividans 66
  JOURNAL   Gene 180 (1-2), 81-89 (1996)
   PUBMED   8973350
REFERENCE   3  (residues 1 to 77)
  AUTHORS   Zekri,S. and Toro,N.
  TITLE     Identification and nucleotide sequence of Rhizobium meliloti
            insertion sequence ISRm6, a small transposable element that belongs
            to the IS3 family
  JOURNAL   Gene 175 (1-2), 43-48 (1996)
   PUBMED   8917074
  REMARK    Erratum:[Gene 1997 Mar 25;188(1):149]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01527.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Rathayibacter rathayi"
                     /db_xref="taxon:33887"
     Protein         1..77
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=8661
     Region          <2..72
                     /region_name="InsE"
                     /note="Transposase InsE and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2963"
                     /db_xref="CDD:442203"
ORIGIN      
        1 midrsrsvad varefglvpq tltswvaahr rtsaggeeel tvqdrarike lerrvrelee
       61 gnlflgkasa ffakkfr
//
LOCUS       WP_258060889             196 aa            linear   BCT 02-MAR-2025
DEFINITION  TasA family protein [Arthrobacter sp. 4R501].
ACCESSION   WP_258060889
VERSION     WP_258060889.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. 4R501
  ORGANISM  Arthrobacter sp. 4R501
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 196)
  AUTHORS   Diehl,A., Roske,Y., Ball,L., Chowdhury,A., Hiller,M., Moliere,N.,
            Kramer,R., Stoppler,D., Worth,C.L., Schlegel,B., Leidert,M.,
            Cremer,N., Erdmann,N., Lopez,D., Stephanowitz,H., Krause,E., van
            Rossum,B.J., Schmieder,P., Heinemann,U., Turgay,K., Akbey,U. and
            Oschkinat,H.
  TITLE     Structural changes of TasA in biofilm formation of Bacillus
            subtilis
  JOURNAL   Proc Natl Acad Sci U S A 115 (13), 3237-3242 (2018)
   PUBMED   29531041
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023806.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12389.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Arthrobacter sp. 4R501"
                     /db_xref="taxon:2058886"
     Protein         1..196
                     /product="TasA family protein"
                     /calculated_mol_wt=19209
ORIGIN      
        1 mkttsgkila svalvgtaaa vagmgtygaf tgttttvdqq vtagtvdidl tdpgtlnvav
       61 agllpgdsve kfatlkntgn stlntvtltt nasvsslltt datnglqvti dacsvawtvv
      121 aaapdtcsgt qtavlakgsi igtgkalanl asvtagssdr lkittslpis adntfqglts
      181 tigftfdatq rtaavg
//
LOCUS       WP_258060899             288 aa            linear   BCT 02-MAR-2025
DEFINITION  ROK family protein, partial [Rathayibacter rathayi].
ACCESSION   WP_258060899
VERSION     WP_258060899.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter rathayi
  ORGANISM  Rathayibacter rathayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Rathayibacter rathayi"
                     /db_xref="taxon:33887"
     Protein         1..>288
                     /product="ROK family protein"
     Region          14..253
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mtqpqdgllp rfavgvdigg tsikaslvdv ttgeraarrf avanplgkep edfaaaiagi
       61 vrdvspiagt pvgvgfpgiv rggvvrqtth vsqrwvglda qallseatgv dvvvvndada
      121 agvaerefga mhgregllll ttlgtgigta lvhegvvipn selghlhidg pdfepqvgfs
      181 avrregitle ewagrlgvyy rhlemllspq lfviggaaah vfdefarfld igteivparf
      241 gndagftgaa mvavspdrla pwyrstrgar esgvvaeagr ddlgadve
//
LOCUS       WP_258060980             414 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Rathayibacter rathayi].
ACCESSION   WP_258060980
VERSION     WP_258060980.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter rathayi
  ORGANISM  Rathayibacter rathayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Rathayibacter rathayi"
                     /db_xref="taxon:33887"
     Protein         1..414
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=44735
     Region          20..395
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mpdprdasrs vspesrpltv vigcdtfapn vngaakfaer laagleqrgh evhvvapsad
       61 gwsgtrvevh egrriivhrl yswrwyphdw lrfalpwrir qnsarildev kpdvvhfqsh
      121 iivgrglgie aakrgirivg tnhfmpenml eftllpkavq akavamawra arrtfgraea
      181 vttptskaaq flekytglqg vhsiscgida dnytpdftar sgntilfvgr vtgekhidvl
      241 lravalldps ldakleivgg gdqmrhlqql astlgiadrv hftgyvadae lkeaytratv
      301 fampsiaelq siatmeamas alpvvaadam alphlvhdge ngylfapgsa ealaegltav
      361 ltadeedlea mkraslriva ahdinrtist feslyrgepv adpatdaasa paas
//
LOCUS       WP_258061013             330 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Arthrobacter sp.
            4R501].
ACCESSION   WP_258061013
VERSION     WP_258061013.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. 4R501
  ORGANISM  Arthrobacter sp. 4R501
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13407.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Arthrobacter sp. 4R501"
                     /db_xref="taxon:2058886"
     Protein         1..330
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=33712
     Region          49..313
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 manfswrkaa lvaavvpmma lsacsstggk padtgnvggg qvattdriki aliahapagd
       61 tfwdtvrkga eeaaakdnve llytsdpeag rqaqlieqav dqkvdgiavt latpealkga
      121 lkkaadagip ivsfnagesa saqlgafthf gsneqlagqa vgtrlaeggf khpvcviqaq
      181 ghvglearca gvkakvpgte ilyvngadmt svestatakl qaskdadvii glgapitltl
      241 lksvstagst akvasfdlnk elaqkvsdgs vlftvdqqpw lqgysavdal wqnkrggfki
      301 gggqsvltgp aiidqsnaae vlkfaeqgir
//
LOCUS       WP_258061019             421 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Arthrobacter sp. 4R501].
ACCESSION   WP_258061019
VERSION     WP_258061019.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. 4R501
  ORGANISM  Arthrobacter sp. 4R501
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13458.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Arthrobacter sp. 4R501"
                     /db_xref="taxon:2058886"
     Protein         1..421
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=41090
     Region          42..402
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mrstivrtit gaalllalag cagagggarv esaeasgdgt lrigliqdst gkqaflndsq
       61 laaaqlaike inaagghkgr pvdlvvgagd gagaqarnla sakvdavigp tdsshaaaai
      121 dvlsaarvpl vspansaarl sryksggyyf rtaaadvaqa svlvklakdg gakslavvhq
      181 dssygrdvaa avtgaaknag letvsntafk pgdagnaaaa akaatpdavv liarddaqga
      241 iaelnnagls gksiilsdga faqygsglgs kaldgaravv pgllpsadfq arlvsvnpal
      301 kdlsfaaety davnlavlaa akadddagrs iaanliavsg gtaggqaaaq asgpatkpcl
      361 sytdclavlk tgaginydge sgpvafdang dittanymvf tygadnravl sgheaagraa
      421 g
//
LOCUS       WP_258061049             692 aa            linear   BCT 02-MAR-2025
DEFINITION  FtsK/SpoIIIE domain-containing protein [Rathayibacter rathayi].
ACCESSION   WP_258061049
VERSION     WP_258061049.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter rathayi
  ORGANISM  Rathayibacter rathayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 692)
  AUTHORS   Begg,K.J., Dewar,S.J. and Donachie,W.D.
  TITLE     A new Escherichia coli cell division gene, ftsK
  JOURNAL   J Bacteriol 177 (21), 6211-6222 (1995)
   PUBMED   7592387
REFERENCE   2  (residues 1 to 692)
  AUTHORS   Wu,L.J. and Errington,J.
  TITLE     Bacillus subtilis SpoIIIE protein required for DNA segregation
            during asymmetric cell division
  JOURNAL   Science 264 (5158), 572-575 (1994)
   PUBMED   8160014
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013727.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01580.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Rathayibacter rathayi"
                     /db_xref="taxon:33887"
     Protein         1..692
                     /product="FtsK/SpoIIIE domain-containing protein"
                     /GO_function="GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=77525
     Region          <207..>336
                     /region_name="VirB4"
                     /note="Type IV secretory pathway, VirB4 component
                     [Intracellular trafficking, secretion, and vesicular
                     transport]; COG3451"
                     /db_xref="CDD:442674"
     Region          295..441
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            order(305..307,326,328..329,389..390)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410871"
ORIGIN      
        1 mpsqqqflep qrqtwgwtva gliaatviav gacilignel laivagvtlp llaivvgifg
       61 ardarraqlv dklvealspm lgskmdrkil radrwskfwn gtprrirlry vagiddsdpq
      121 wlgeirahla rrlgvefdit khnrkkcvie lqqspeaeet eaprevavra ervvtellgs
      181 paqpapevkm ewdgevlkal evkhsvgarm srpiyrqqve rtlstmlpgr wraqwnlesd
      241 svrfeirpnl pasiphpipl vtntnirety ndlaipfgid edshtmtwmp rrnphllvtg
      301 tsgsgktvtm qgllgelakr gaqidvndak liefigfkdw pnvrlvsssl eeqvrlihha
      361 welqeeryel ivngeasedd fepyflflde fadfreavtd wyadikqkgd ptkppvlkkv
      421 rsvarkgrta rvhfvvglqr pdaefltgev rdnfsarism grlspqgalm mwenastgvs
      481 lprksqgrgi tlnedsrpve fqsfwtpdpr kvkaddvenr rildglrpae vrhermmivp
      541 pkaeadldsd ngemiepsyt efasakivpy dreraasfrp kltvytgggq ptstkstask
      601 lalveraddv edldlddgyg eieqgpttsl rpgdlvlvdd tldlwavvea aesdvveedy
      661 icvdyrtddg eegsislpdd etipvrkpad sk
//
LOCUS       WP_258061083             174 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA-formamidopyrimidine glycosylase family protein [Rathayibacter
            rathayi].
ACCESSION   WP_258061083
VERSION     WP_258061083.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter rathayi
  ORGANISM  Rathayibacter rathayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 174)
  AUTHORS   Gilboa,R., Zharkov,D.O., Golan,G., Fernandes,A.S., Gerchman,S.E.,
            Matz,E., Kycia,J.H., Grollman,A.P. and Shoham,G.
  TITLE     Structure of formamidopyrimidine-DNA glycosylase covalently
            complexed to DNA
  JOURNAL   J Biol Chem 277 (22), 19811-19816 (2002)
   PUBMED   11912217
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013328.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01149.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Rathayibacter rathayi"
                     /db_xref="taxon:33887"
     Protein         1..174
                     /product="DNA-formamidopyrimidine glycosylase family
                     protein"
                     /GO_function="GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /calculated_mol_wt=17326
     Region          1..>86
                     /region_name="FpgNei_N"
                     /note="N-terminal domain of Fpg (formamidopyrimidine-DNA
                     glycosylase, MutM)_Nei (endonuclease VIII) base-excision
                     repair DNA glycosylases; cl03119"
                     /db_xref="CDD:470740"
     Site            order(2..3,51,66,68..70,85..86)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176798"
     Site            2
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:176798"
     Site            order(3..6,8..9,12,48..52)
                     /site_type="other"
                     /note="H2TH interface [polypeptide binding]"
                     /db_xref="CDD:176798"
     Site            order(3,51)
                     /site_type="active"
                     /note="putative catalytic residues [active]"
                     /db_xref="CDD:176798"
ORIGIN      
        1 mpegdsvhrl aarlrraadg ctvlegelrs gdtagsslag lrilghethg khllarfsgg
       61 stlhthlrtq gswtapaass sgprrttcas asasttarrs aastspssss sppatspaps
      121 atsaptrsar tgtptrpsga spgsrtgpar rgscrplppg avvrenlpvs vsss
//
LOCUS       WP_258061088             301 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Arthrobacter sp.
            4R501].
ACCESSION   WP_258061088
VERSION     WP_258061088.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. 4R501
  ORGANISM  Arthrobacter sp. 4R501
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 301)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 301)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 301)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 301)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Arthrobacter sp. 4R501"
                     /db_xref="taxon:2058886"
     Protein         1..301
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=32909
     Region          13..279
                     /region_name="AppF"
                     /note="ABC-type oligopeptide transport system, ATPase
                     component [Amino acid transport and metabolism]; COG4608"
                     /db_xref="CDD:443658"
ORIGIN      
        1 mtetaalraa esaparqell rvdnlvveya gkgfrarrfr altdinisig qgetlglvge
       61 sgsgkttlgr avlglapvsg gkitfegqdi shagrkqrrv lsrdmqvvfq dpytslnpal
      121 eigdilaepl gvqgmeqaaa kkrvkelldq vglpsdaihr lprefsggqr qrvaiarala
      181 lspklivcde pvsaldlstq arvldlflqi qkdtgvsylf vshdldvvrh ishrvavmyr
      241 geiveqgpad vvtrdpehpy tqrlllaspv pdpdrqekrr adrhrlleeq rmqaeqagvp
      301 a
//
LOCUS       WP_258061128             979 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Arthrobacter sp. 4R501].
ACCESSION   WP_258061128
VERSION     WP_258061128.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. 4R501
  ORGANISM  Arthrobacter sp. 4R501
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13191.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..979
                     /organism="Arthrobacter sp. 4R501"
                     /db_xref="taxon:2058886"
     Protein         1..979
                     /product="AAA family ATPase"
                     /calculated_mol_wt=106525
     Region          <52..973
                     /region_name="COG3899"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443106"
ORIGIN      
        1 mslaasfrwq aetwaepavt etrwrgrdar ssklasmipg hhhgnpeegl allghaevfe
       61 elleslravr kgnvrtvvls gprgsgktav ldlflehcrg vargvrvlsa tgdeweaqlp
      121 lagysqlmvt pplrsakdpg rgngrsadlg gilnpaqaan yastlgahld glqlhgsvvv
      181 avddvqhlda etlhvlvfvm rrlrskrvlf lvtldpaqar lvpagvlafl tghqvsrlpl
      241 dplsphrvqe larrwfgidl nataaheivr htggwpqpvv ellgelppet wqtwfsslpp
      301 ssrvraqvrs lleaaspdlv avaeatsvlg rnagvaevar vsgvesvmda ldeghragll
      361 glsvdqahsl vkffetgtte svyeqiapsr rirlhraaad svqnegdrlg hrvaatpgpd
      421 ealaaeleey arqqalvgaw hdvstalfsa srlsgdirvg ndrqlravda lvgsgniaqa
      481 qmwaaavdam apsplrssvl gylstasgqn hsaqtqlema wrtsnpqrdp taaaqvaqrl
      541 vlhgvaswdg pvitrwaeqa msltqagtpa hieseaiygl glyaqgrlse aeasyrrafe
      601 hasenaqkqr vqmgagwlal rlddaetalv nfeaaaptef rggslrislw aeawlartql
      661 vlgnwdaaaa tvarasvrle tsrmplirpl lywtaaelws mrgdwdrary yvsqaavqpg
      721 tyramqvpas lararfhear adyesalavl qplteldpwt enrvsfwpwq dsyvnalvmt
      781 dqldvadafl tafekvprer avpsdlarma wargrlvaaq gdpdiarehf etalghlrgh
      841 nrpylrarvs fafgqsmrra gkrrlassvl rvardlydsl gaatyvdrcd relkatgldv
      901 gnmpdpsdav lvavtgpqvq ltaqeqavae lvaagatnke aaralfladk tvqyhltriy
      961 gkfgirsrse laarfrptd
//
LOCUS       WP_258061148             368 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Arthrobacter sp. 4R501].
ACCESSION   WP_258061148
VERSION     WP_258061148.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. 4R501
  ORGANISM  Arthrobacter sp. 4R501
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 368)
  AUTHORS   Vertes,A.A., Inui,M., Kobayashi,M., Kurusu,Y. and Yukawa,H.
  TITLE     Isolation and characterization of IS31831, a transposable element
            from Corynebacterium glutamicum
  JOURNAL   Mol Microbiol 11 (4), 739-746 (1994)
   PUBMED   8196545
REFERENCE   2  (residues 1 to 368)
  AUTHORS   van der Zee,A., Agterberg,C., van Agterveld,M., Peeters,M. and
            Mooi,F.R.
  TITLE     Characterization of IS1001, an insertion sequence element of
            Bordetella parapertussis
  JOURNAL   J Bacteriol 175 (1), 141-147 (1993)
   PUBMED   8093238
REFERENCE   3  (residues 1 to 368)
  AUTHORS   Johansen,E. and Kibenich,A.
  TITLE     Isolation and characterization of IS1165, an insertion sequence of
            Leuconostoc mesenteroides subsp. cremoris and other lactic acid
            bacteria
  JOURNAL   Plasmid 27 (3), 200-206 (1992)
   PUBMED   1325060
REFERENCE   4  (residues 1 to 368)
  AUTHORS   Cirillo,J.D., Barletta,R.G., Bloom,B.R. and Jacobs,W.R. Jr.
  TITLE     A novel transposon trap for mycobacteria: isolation and
            characterization of IS1096
  JOURNAL   J Bacteriol 173 (24), 7772-7780 (1991)
   PUBMED   1660454
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013753.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01610.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Arthrobacter sp. 4R501"
                     /db_xref="taxon:2058886"
     Protein         1..>368
                     /product="transposase"
     Region          43..87
                     /region_name="zf-ISL3"
                     /note="zinc-finger of transposase
                     IS204/IS1001/IS1096/IS1165; pfam14690"
                     /db_xref="CDD:464264"
     Region          92..142
                     /region_name="HTH_Tnp_ISL3"
                     /note="Helix-turn-helix domain of transposase family ISL3;
                     pfam13542"
                     /db_xref="CDD:463915"
     Region          118..>318
                     /region_name="COG3464"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442687"
ORIGIN      
        1 mrnarlwrsl lgvekmvvea idfdedsgvl lasvrptgsm rnrcgicrrr cpkydqgegr
       61 rrwraldagt igvlleadap rvscrehgvt vaavpwarhq aghiyhfdaq vawlatqtsk
      121 taitelmria wrtvgaiitr vwndtaatfd pfadlkrigi deisykrghk yltvvvdhds
      181 grlvwaavgr dnatlgtifd algeercagi thvsadgadw iaavvaqrcp aavrcadpfh
      241 vvkwateald evrraawnea rkaaraneak rgrgrpakda parpdsarat gmknsryalw
      301 knpenltekq qtklvdlcgc phrliyaepa tmprkpvlpl naswrrlvfr rgelrrigiv
      361 srggacsw
//
LOCUS       WP_258061214             178 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding protein, partial [Arthrobacter sp. 9E06].
ACCESSION   WP_258061214
VERSION     WP_258061214.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. 9E06
  ORGANISM  Arthrobacter sp. 9E06
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 178)
  AUTHORS   Mittl,P.R. and Schulz,G.E.
  TITLE     Structure of glutathione reductase from Escherichia coli at 1.86 A
            resolution: comparison with the enzyme from human erythrocytes
  JOURNAL   Protein Sci 3 (5), 799-809 (1994)
   PUBMED   8061609
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013086.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00890.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Arthrobacter sp. 9E06"
                     /db_xref="taxon:2058890"
     Protein         1..>178
                     /product="FAD-binding protein"
     Region          <2..178
                     /region_name="PRK07843"
                     /note="3-oxosteroid 1-dehydrogenase"
                     /db_xref="CDD:236111"
ORIGIN      
        1 maqdngaale lmddawwggs vaaapghspa fivgersmpy simldakgdr fvnesesyvd
       61 lghhmlehdk dgpywlvgda rharrylrtf ainpknnkam kdagimvkaa tlselaakld
      121 leparleati rrfngfarag vdgdfgrgns aydryygdpt vhpnaclgpl ekgpftaf
//
LOCUS       WP_258061217             170 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Arthrobacter sp.
            9E06].
ACCESSION   WP_258061217
VERSION     WP_258061217.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. 9E06
  ORGANISM  Arthrobacter sp. 9E06
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 170)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Arthrobacter sp. 9E06"
                     /db_xref="taxon:2058890"
     Protein         <1..170
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <1..166
                     /region_name="PRK08155"
                     /note="acetolactate synthase large subunit; cl39075"
                     /db_xref="CDD:453955"
ORIGIN      
        1 tlphdamvtl gagehtnwah ryfptqryas misarngsmg ysipsaiaas leypgrrvvt
       61 iagdgeflmn gqelataaqy gatplvivmd nqeygtirth qerhypdrvs gtqlknpefa
      121 lmaqafggfg ikverdadip aaitaalgai dedrvfalih lvveqrvkay
//
LOCUS       WP_258061252             280 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ROK family protein [unclassified Rathayibacter].
ACCESSION   WP_258061252
VERSION     WP_258061252.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..280
                     /product="ROK family protein"
                     /calculated_mol_wt=29290
     Region          14..253
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mtqphdgllp rfavgvdigg tsikaslvdv ttgeraarrf avanplgkep edfaeaiagi
       61 vrdvspiagt pvgvgfpgiv rggvvrqtth vsqrwvglda qallseatgv dvvvvndada
      121 agvaerefga mrgregllll ttlgtgigta lvhegvvipn selghlhidg pdfepkvgfs
      181 avrregitle ewagrlsvyy rhlemllspq lfviggaaah vfdefarfld igteivparf
      241 gndagftgaa mvavspdrla pwyrstrgar ldpgapaiad
//
LOCUS       WP_258061319             173 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Rathayibacter sp. AY1A4].
ACCESSION   WP_258061319
VERSION     WP_258061319.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1A4
  ORGANISM  Rathayibacter sp. AY1A4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12688.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Rathayibacter sp. AY1A4"
                     /db_xref="taxon:2080522"
     Protein         1..173
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=18276
     Region          52..168
                     /region_name="TPR_5"
                     /note="Tetratrico peptide repeat; pfam12688"
                     /db_xref="CDD:403783"
ORIGIN      
        1 mtetrasdsd rpetdalalw laaverldaq ddpdgvverm rvlaarypgh dgvaafelgg
       61 aldsagheae aaveyerala agldderrar ttiqyastlr nlgrtdeaid llagaaahpa
      121 vgsarevfla lalhsagrvd ealrialeal apglpryqrs vrayaaaltd seq
//
LOCUS       WP_258061328             467 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [unclassified Rathayibacter].
ACCESSION   WP_258061328
VERSION     WP_258061328.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..467
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47244
     Region          25..373
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(28..29,32..33,36,67,117..118,120..122,125,145,
                     148..149,152,270,273..274,277..279,282,310,314,367..368,
                     372)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mrsrdrrgit saplllttig ttslvflcaf eslavttimp ivsadldgra lyplafaatl
       61 aaavvgmvaa gssadrrgpt pslvvaillf tlglvaagaa qsmpvfvaar llqglgsggi
      121 tvtlyvlvar vypselhpri fgafaaawvv pslvgplvag vvaelaswhw vffgvvalva
      181 lasaaiaptl rsleprerlp fdrravgria ravvvsagvv vlstsaelap dlagllaaaa
      241 vvivvvavra llpvgtlrar gvlpsvillr alvaaaffgt evylplllse qyglppwlsg
      301 amltagavsw algsnlqgrp gtrlshggam rlgtslvlag igvvllvtvl alspivagvg
      361 wflagggmgt mfprmgtmtl alsapgregf nssalqiads tgasvslalt gllaaavtgl
      421 igagtgvfaa tfsyaaliai vavglagrld gllrregrre paeqaql
//
LOCUS       WP_258061330             985 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: immunoglobulin-like domain-containing protein
            [unclassified Rathayibacter].
ACCESSION   WP_258061330
VERSION     WP_258061330.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042837.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20578.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..985
                     /product="immunoglobulin-like domain-containing protein"
                     /calculated_mol_wt=101340
     Region          <186..252
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          279..348
                     /region_name="aBig_2"
                     /note="Atrophied bacterial Ig domain; pfam20578"
                     /db_xref="CDD:466727"
     Region          361..451
                     /region_name="aBig_2"
                     /note="Atrophied bacterial Ig domain; pfam20578"
                     /db_xref="CDD:466727"
     Region          488..803
                     /region_name="GH43_Bt3655-like"
                     /note="Glycosyl hydrolase family 43 protein such as
                     Bacteroides thetaiotaomicron VPI-5482 arabinofuranosidase
                     Bt3655; cd08983"
                     /db_xref="CDD:350097"
ORIGIN      
        1 mrslflsala ctsvaltgal vpvsaqavdv paptahydms hagsalldis gngrnatltg
       61 ltdasfanag gdqvarfknd gyaslpqglv tgadnafave ytvktqttan qfgwvigdgv
      121 gpwnttqlgn hvfvnprnpd gspsgqvlag irvkeptsng etrmpfggtl npgfttltlv
      181 gtgtgsstvl tlyrdgtqis tanttksmas ivptgstlgy lgrslytgda lvtadvtdvk
      241 fwdtsltaeq vassmptada kasatsallr sdiqpvllag npsltqvssn ltlpasssgv
      301 pltwtssnsa vvsttgvvsr tiaqntpvtl tattaqgati afdvvvlaps inddldalkl
      361 atrttenlpl avkgakngtd itwtssdpal vtptntsyaa pavgaadpyr gggvvtrpay
      421 gsgdrtvtlt akatlngvte traftltvae lgrtapdagy asayfksdgd ekiyqaatsg
      481 ndfftfspvn ggkavitstt dtkglrdpfi lrshngdkyy mvatdlcisc gtgwgdaqsk
      541 gslkievwes tdlvqwtrtn gadtgitvnq paagmtwape aywddalqsy vvffssrlys
      601 datktnndkl ysrvfsvitr dfrtftappa twqdtgyari dstitkigdy yyrftkneeg
      661 gaagtleagk diflekskvl tagttssnws adpnttwqlt dtrmtsletg qagegpeiik
      721 lnagdpndtt gtgdgyaflv dnygdggyka fltsgaaiag ssqtnrlsqs adwnvspksr
      781 aglpasprhg afvsvpqtvl tamknwtgvt avdstttlta dgrtvtatva aadrgdvvgs
      841 vtftggswts tvplsggsas vsvpagvtgv tasytgypdk lvrtsvsaav pldtlelvpa
      901 vatrcvagki vltatvkntd taaadvtias aygsksftav apgssasaaf ttrlasmpag
      961 tvtvtgsatg qpaftatvpv aaarc
//
LOCUS       WP_258061331             386 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [unclassified Rathayibacter].
ACCESSION   WP_258061331
VERSION     WP_258061331.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..386
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=37806
     Region          43..379
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(57,108..109,111..113,116,136,139..140,143,216,
                     219..220,223..225,228,257,261,310..311,315,319,335,
                     338..339,342..343,346)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mrnrlatpsl lahavliqav afllrpaavy qairldvpaw algalgasfa lvpllialpv
       61 gglvdrvgar avmavgslva vgaaavllla ggsvaglllg iallgaghlg cvvgqqtvva
      121 ggtggtrlds rfgyytfaas lgqaigpafi pvlaggsvrp dpaplflvgg ilavlllvst
      181 agirspsprg paaegaaapg stlgllrvpg laralltsat vvaavdltvv ylpalgaerg
      241 lpagvvgall tvralasmas rlllgaatar lgrtrvmvgg ilisalclvl valpaptvll
      301 fvavaalglg lgigqpitms wliertpadr hgralalrla gnrlglialp sllgvlaaas
      361 gaggvligtg aavgatllll rgvrld
//
LOCUS       WP_258061732             151 aa            linear   BCT 02-MAR-2025
DEFINITION  YitT family protein [Rathayibacter rathayi].
ACCESSION   WP_258061732
VERSION     WP_258061732.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter rathayi
  ORGANISM  Rathayibacter rathayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014627.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02588.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Rathayibacter rathayi"
                     /db_xref="taxon:33887"
     Protein         1..151
                     /product="YitT family protein"
                     /calculated_mol_wt=15929
     Region          <26..>139
                     /region_name="YitT"
                     /note="Uncharacterized membrane-anchored protein YitT,
                     contains DUF161 and DUF2179 domains [Function unknown];
                     COG1284"
                     /db_xref="CDD:440895"
ORIGIN      
        1 mqlrmrlvga aqqahrpsts tsgkkgwrft lrtmfsivlv sllaglhpla fselriepvy
       61 gvltgdilag igllilvrhg sslggfsvva litqerlgwr agyvmmalda cvvaaallvv
      121 palnvlisaa gvvvlnlvla fnhrpgrylg s
//
LOCUS       WP_258061738             414 aa            linear   BCT 02-MAR-2025
DEFINITION  ROK family protein [Arthrobacter sp. ZGTC412].
ACCESSION   WP_258061738
VERSION     WP_258061738.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC412
  ORGANISM  Arthrobacter sp. ZGTC412
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Arthrobacter sp. ZGTC412"
                     /db_xref="taxon:2058900"
     Protein         1..414
                     /product="ROK family protein"
                     /calculated_mol_wt=42930
     Region          88..390
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mrrtvagtnl gnnrdstrqh nlstvlglvh smagvsraql tratglnrst igalvgelvh
       61 lglvvesdld qaqqhgrpsi miepspgala lsvnpdidvv svalvalggh ivnpvrfhtv
      121 rapsvaevvn ivkaiytgmr tslparhrim gvglaipglv dpvdgtviea phlgwrdqrl
      181 aallsealkl pvtaandava garaqatfga grdvrdlvyl yggasgiggg visggrlirg
      241 atgfagqlgh thvrsggtac tcgsygclea evtreeliaa vglpageren leeavleklq
      301 desasqelrd iidrqvalla iglksvvnll npslivlggf lrilvraapd algealrtpg
      361 trgpresvai elaplgedsi lvgaaelafe plirdpagfl rpqdddadar vpsa
//
LOCUS       WP_258061745             241 aa            linear   BCT 02-MAR-2025
DEFINITION  Rid family hydrolase [Arthrobacter sp. ZGTC412].
ACCESSION   WP_258061745
VERSION     WP_258061745.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC412
  ORGANISM  Arthrobacter sp. ZGTC412
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 241)
  AUTHORS   Lambrecht,J.A., Flynn,J.M. and Downs,D.M.
  TITLE     Conserved YjgF protein family deaminates reactive enamine/imine
            intermediates of pyridoxal 5'-phosphate (PLP)-dependent enzyme
            reactions
  JOURNAL   J Biol Chem 287 (5), 3454-3461 (2012)
   PUBMED   22094463
REFERENCE   2  (residues 1 to 241)
  AUTHORS   Thakur,K.G., Praveena,T. and Gopal,B.
  TITLE     Mycobacterium tuberculosis Rv2704 is a member of the
            YjgF/YER057c/UK114 family
  JOURNAL   Proteins 78 (3), 773-778 (2010)
   PUBMED   19899170
REFERENCE   3  (residues 1 to 241)
  AUTHORS   Schmitz,G. and Downs,D.M.
  TITLE     Reduced transaminase B (IlvE) activity caused by the lack of yjgF
            is dependent on the status of threonine deaminase (IlvA) in
            Salmonella enterica serovar Typhimurium
  JOURNAL   J Bacteriol 186 (3), 803-810 (2004)
   PUBMED   14729707
REFERENCE   4  (residues 1 to 241)
  AUTHORS   Morishita,R., Kawagoshi,A., Sawasaki,T., Madin,K., Ogasawara,T.,
            Oka,T. and Endo,Y.
  TITLE     Ribonuclease activity of rat liver perchloric acid-soluble protein,
            a potent inhibitor of protein synthesis
  JOURNAL   J Biol Chem 274 (29), 20688-20692 (1999)
   PUBMED   10400702
REFERENCE   5  (residues 1 to 241)
  AUTHORS   Rappu,P., Shin,B.S., Zalkin,H. and Mantsala,P.
  TITLE     A role for a highly conserved protein of unknown function in
            regulation of Bacillus subtilis purA by the purine repressor
  JOURNAL   J Bacteriol 181 (12), 3810-3815 (1999)
   PUBMED   10368157
REFERENCE   6  (residues 1 to 241)
  AUTHORS   Oka,T., Tsuji,H., Noda,C., Sakai,K., Hong,Y.M., Suzuki,I., Munoz,S.
            and Natori,Y.
  TITLE     Isolation and characterization of a novel perchloric acid-soluble
            protein inhibiting cell-free protein synthesis
  JOURNAL   J Biol Chem 270 (50), 30060-30067 (1995)
   PUBMED   8530410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013228.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01042.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Arthrobacter sp. ZGTC412"
                     /db_xref="taxon:2058900"
     Protein         1..241
                     /product="Rid family hydrolase"
                     /calculated_mol_wt=25124
     Region          72..233
                     /region_name="YjgF_YER057c_UK114_family"
                     /note="YjgF, YER057c, and UK114 belong to a large family
                     of proteins present in bacteria, archaea, and eukaryotes
                     with no definitive function. The conserved domain is
                     similar in structure to chorismate mutase but there is no
                     sequence similarity and no...; cl10015"
                     /db_xref="CDD:447879"
     Site            order(72..73,76,78,84,86,88..89,149,151..152,154,156,172,
                     175,210..217,228,230,232)
                     /site_type="other"
                     /note="homotrimer interaction site [polypeptide binding]"
                     /db_xref="CDD:100004"
     Site            order(72,168,172,212,228)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:100004"
ORIGIN      
        1 mipakapagt htqprkkpmf rrrfslvaag iagisltata afaapavfkd ltdpkpgttv
       61 snlpagqdnp miangvaiga ntpiyktsgl gpsalntaap agseqryvdt svfpggklpp
      121 gvtiteaqgi nalrrigenl aqagldyddv itmrvflqnp agaekadfdg wnrayrqyfa
      181 ntsladrsai kvplgsaapa epfvlnparp srfaleienl pvngwlveve vdaayptpgg
      241 k
//
LOCUS       WP_258061772             285 aa            linear   BCT 02-MAR-2025
DEFINITION  ROK family protein, partial [Rathayibacter rathayi].
ACCESSION   WP_258061772
VERSION     WP_258061772.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter rathayi
  ORGANISM  Rathayibacter rathayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Rathayibacter rathayi"
                     /db_xref="taxon:33887"
     Protein         1..>285
                     /product="ROK family protein"
     Region          14..253
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mtqpqdgllp rfavgvdigg tsikaslvdv ttgeraarrf avanplgkep edfaaaiagi
       61 vrdvspiagt pvgvgfpgiv rggivrqtth vsqrwvglda qallseatgv dvvvvndada
      121 agvaerefga mhgregllll ttlgtgigta lvhegvvipn selghlhidg pdfepqvgfs
      181 avrregitle ewagrlgvyy rhlemllspq lfviggaaah vfdefarfld igteivparf
      241 gndagftgaa mvavspdrla pwyrstrgar esgvvaeagr ndlga
//
LOCUS       WP_258061779             487 aa            linear   BCT 02-MAR-2025
DEFINITION  lyase family protein [Arthrobacter sp. ZGTC412].
ACCESSION   WP_258061779
VERSION     WP_258061779.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC412
  ORGANISM  Arthrobacter sp. ZGTC412
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00206.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Arthrobacter sp. ZGTC412"
                     /db_xref="taxon:2058900"
     Protein         1..487
                     /product="lyase family protein"
                     /calculated_mol_wt=49790
     Region          13..467
                     /region_name="Lyase_I_like"
                     /note="Lyase class I_like superfamily: contains the lyase
                     class I family, histidine ammonia-lyase and phenylalanine
                     ammonia-lyase, which catalyze similar beta-elimination
                     reactions; cl00013"
                     /db_xref="CDD:469578"
     Site            order(179,186,189..190,193,250,260..261,264,267..268,301,
                     304,307,310..311)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:176466"
ORIGIN      
        1 mteaaslvgd vgllspvsas plvgaltgdr avlaailave sgwaavleka glapagaaav
       61 vasaaepgry daadiarraq gggnpvipll adlrehvaal dtsgagagka vhtsltsqdv
      121 ldtalmlvar ntvealladl kgtttalaal veqhadtlcv grsltqhslp ftfglraaqw
      181 fhgvaaagrh lenmefpvqf ggaagtlaag tvltsgspat pfsladavas qlglaaaaap
      241 whtnrlavts lghglaavld sfgkiaadvl flsrpevgel aepraagrgv ssampqkqnp
      301 vlsvlvrsaa lqapqlvaql hlaaanfnde rpdgawhtew palrqllsla lgaashirel
      361 aeglqvfpda mrrnlnlagp lllaegvgaa vaplledrgg rngkqqlqav vdrtlqappa
      421 eqaatyrkll reavpagvlt dlrleellsp asylgesaei lrrilaaypd fvlsasadtd
      481 pngarrg
//
LOCUS       WP_258061808             412 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Arthrobacter sp. ZGTC412].
ACCESSION   WP_258061808
VERSION     WP_258061808.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC412
  ORGANISM  Arthrobacter sp. ZGTC412
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 412)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 412)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Arthrobacter sp. ZGTC412"
                     /db_xref="taxon:2058900"
     Protein         1..412
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=45310
     Region          3..393
                     /region_name="ComEC"
                     /note="DNA uptake channel protein ComEC C-terminal domain,
                     metallo-beta-lactamase superfamily [Intracellular
                     trafficking, secretion, and vesicular transport]; COG2333"
                     /db_xref="CDD:441904"
ORIGIN      
        1 mynvgfgdcf lvtirrpekv wrmlvdcgvh nqgqkhsmke ivpalisdit ekgrahidvl
       61 vathhhadhi agfalddwen vsvgevwlpf vedesdvdai rlreaqdsaa iglnavinql
      121 qgghssdswp gpiahaydlv vnslrnqdaa drllgkngkr fknsdvktry fpivgqdvtr
      181 vpidgmggti hvlgpsrnpd aikamnppss agwlrfdhqs svaaggvgaa eslfspeysl
      241 ssryvpihlr qekaslalrt lsyyegishv asilersvnn tslifvveig gvkllfpgda
      301 qhgawahvla lkenrsllad vnmykighhg shngtprefv eevwrsgava flpwglvkrw
      361 qesipkaelv ealkarnhei icggepfkhd tdeeissqdl ylerafpiva li
//
LOCUS       WP_258061876             401 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent monooxygenase [Arthrobacter sp. ZGTC412].
ACCESSION   WP_258061876
VERSION     WP_258061876.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC412
  ORGANISM  Arthrobacter sp. ZGTC412
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 401)
  AUTHORS   Schreuder,H.A., van der Laan,J.M., Swarte,M.B., Kalk,K.H., Hol,W.G.
            and Drenth,J.
  TITLE     Crystal structure of the reduced form of p-hydroxybenzoate
            hydroxylase refined at 2.3 A resolution
  JOURNAL   Proteins 14 (2), 178-190 (1992)
   PUBMED   1409567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01494.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Arthrobacter sp. ZGTC412"
                     /db_xref="taxon:2058900"
     Protein         1..401
                     /product="FAD-dependent monooxygenase"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /calculated_mol_wt=42552
     Region          7..392
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mvvrqvmrav vvgagiaglv varqlglagw dvevlekaaa prpdgymmdf fglgveaaer
       61 iglyprlaav ayrvdaveyv dargrttssl dygqfarfag gkvlsllrpd leqaalaald
      121 dvapgrvrvr ygatagrivs ggdgvrvtvd dlpdeapadv lvgadgihsa vraqvfgpee
      181 eylrplgmra vafivtepvl narfrnrfvl tdsidrmagl yglrsdqvaa fmvyrdatga
      241 aghlpagspg qrlhrefsgl geavdrlldl cpehpyddiv aqvvmpgwqr ercvlvgdac
      301 gavslvagqg aslavagaal lgdvlgpvts pegispalve ferrwrpvve eaqaagrraa
      361 ssflpanraq rllrrwiirg srlpgadrlv arqivgrsgk g
//
LOCUS       WP_258061900             347 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase [Arthrobacter sp. ZGTC412].
ACCESSION   WP_258061900
VERSION     WP_258061900.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC412
  ORGANISM  Arthrobacter sp. ZGTC412
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 347)
  AUTHORS   Urbach,C., Evrard,C., Pudzaitis,V., Fastrez,J., Soumillion,P. and
            Declercq,J.P.
  TITLE     Structure of PBP-A from Thermosynechococcus elongatus, a
            penicillin-binding protein closely related to class A
            beta-lactamases
  JOURNAL   J Mol Biol 386 (1), 109-120 (2009)
   PUBMED   19100272
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024748.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13354.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Arthrobacter sp. ZGTC412"
                     /db_xref="taxon:2058900"
     Protein         1..347
                     /product="serine hydrolase"
                     /GO_function="GO:0008800 - beta-lactamase activity
                     [Evidence IEA]"
                     /GO_process="GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=36227
     Region          105..346
                     /region_name="PenP"
                     /note="Beta-lactamase class A [Defense mechanisms];
                     COG2367"
                     /db_xref="CDD:441934"
ORIGIN      
        1 mgesrqgtgd aamntlpgad pagtrhlrls whitrparfl aalavvvmat ttwtpapapf
       61 ptalaapaaq netipspaaq ketppspapa atkkaappvs ppapivraqa vpvapdletd
      121 vvklegqing iigangqyql gvalidtadg avyqygvrek fvaastgkil aaaayyhfae
      181 tgqlslattl gpgtaafqiq qmiqqsnnns walivgaigy qrihdyaasi giaydrtfnt
      241 lspaetaril gllyngelis gahtaqllsy mqhtnyesli paavppgitv fhkygllngn
      301 lhdasilvqn ghayvfvvyt lgagpvdipa ramvihqltr avvsglf
//
LOCUS       WP_258061901             441 aa            linear   BCT 02-MAR-2025
DEFINITION  BTAD domain-containing putative transcriptional regulator
            [Arthrobacter sp. ZGTC412].
ACCESSION   WP_258061901
VERSION     WP_258061901.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC412
  ORGANISM  Arthrobacter sp. ZGTC412
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 441)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015649.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03704.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Arthrobacter sp. ZGTC412"
                     /db_xref="taxon:2058900"
     Protein         1..441
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /calculated_mol_wt=46363
     Region          25..269
                     /region_name="DnrI"
                     /note="DNA-binding transcriptional regulator
                     DnrI/AfsR/EmbR, SARP family, contains BTAD domain
                     [Transcription]; COG3629"
                     /db_xref="CDD:442847"
     Region          307..422
                     /region_name="REC_NarL-like"
                     /note="phosphoacceptor receiver (REC) domain of NarL
                     (Nitrate/Nitrite response regulator L) family response
                     regulators; cd17535"
                     /db_xref="CDD:381090"
ORIGIN      
        1 mitlelanda vhaglvldap pqaqalqisv fgpltirrgd ielsasdlgg pkprqvleil
       61 lmnfgspvsk trlvellwgg nhpvvalptl esyvsvlrrs lqpgagrtgp lrtvtggyai
      121 drslvdldld rfetltrlag qaqprealal ltealdlase pllgdellpv waeeeraaha
      181 arlglarvaa aeaalavgen gmaislggea vkedplnera wtalvvgler ngentealra
      241 fdrcrriide elgcapgpal qkaqarllts taatsgpaav rnslsvvtgs rshapagikq
      301 dtdrlqiliv ddhttfsdll agaldrepdl hsvgvaksva savttfrelr pdvvimdlyl
      361 pdgtgleaae silaeapetr ivmltgnpsq ealgeaarig icgflpkdga lgvmlntlrh
      421 ahvgnmivsp smvarwgata a
//
LOCUS       WP_258061932             410 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Rathayibacter iranicus].
ACCESSION   WP_258061932
VERSION     WP_258061932.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter iranicus
  ORGANISM  Rathayibacter iranicus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 410)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 410)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Rathayibacter iranicus"
                     /db_xref="taxon:59737"
     Protein         1..410
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=44351
     Region          1..392
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(96..97,100,180,209,212,241,244)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:99742"
     Site            244
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99742"
ORIGIN      
        1 margagmadp fwdealaakv hgldlsrtgs hamftisgre lsnmssysyl gldenadiie
       61 aaktqiaksg vlnsslsrvr vrlktlseae drlsslfrad vgtvtscaag vwamlplias
      121 glltddvrpi vvfdrfahfc lqsirglcav etevqtighn dmerleeick snkvvvyvgd
      181 svystggtta pmeklielqd kyglflflde ahstsvlgak grglaldamg einrrtilvt
      241 slnkgfgasg gaivfgptad ksrreralrn ggpfmwsqri ntaglgaiia scalhesavl
      301 palqdqlrva reafdtnypl qsanaaspvr fipigdekqt irlsralmnr gyyvepdfyp
      361 vvmwghaglr vrlranmsva evsrftstle qvvpsvsitp psensntrrs
//
LOCUS       WP_258061958             293 aa            linear   BCT 02-MAR-2025
DEFINITION  ROK family protein, partial [Rathayibacter tritici].
ACCESSION   WP_258061958
VERSION     WP_258061958.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter tritici
  ORGANISM  Rathayibacter tritici
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Rathayibacter tritici"
                     /db_xref="taxon:33888"
     Protein         1..>293
                     /product="ROK family protein"
     Region          14..253
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mtqpqdgllp rfavgvdigg tsikaslvdv ttgeraarrf avanplgkep edfaaaiagi
       61 vrdvspiagt pvgvgfpgiv rggvvrqtth vserwvglda qallseatgv dvvvvndada
      121 agvaerefga mrgregllll ttlgtgigta lvhegvvipn sefghlhidg pdfepqvgfs
      181 avrregitle ewagrlgvyy rhlemllspq lfviggaaah vfdefarfld igteivparf
      241 gndagftgaa mvavspdrla pwyrstrgar esgvvaeagg ddlgtdveea rel
//
LOCUS       WP_258062110             576 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Arthrobacter sp. B0490].
ACCESSION   WP_258062110
VERSION     WP_258062110.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. B0490
  ORGANISM  Arthrobacter sp. B0490
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Arthrobacter sp. B0490"
                     /db_xref="taxon:2058891"
     Protein         1..576
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=62364
     Region          60..547
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mktpaarrll sgrvergalp laailvaavs lvsctagevt ppqpsatvat ttadastftf
       61 gtaadprtld palandtesy rvtqqmmegl vgvdpltsep tpllaeswee qddgrayeft
      121 lrddvvfhdg rpldaeavca nfdrwynlpa dtragssrlp fenvfkafsd rpdttlyegc
      181 tasseytvdl qlrgritgli palaapafai sspaalrsga addlgqsrdg apisryglap
      241 vgtgpfrlvs wtpgavdlsa ftgywgerge veevvfttip npdsraralt sgridgydfv
      301 svdsavdlar nglqflqrdp ysvlylgmnq sfpgvddtlf rravahavdk daliegrfln
      361 gtkparqfip eklgvgndtv ndygydldla relledsgyd grelpfyypr nvsraylpsp
      421 ekayaelsrq lteagfniep vpvdwsdgyv aavqepgera fhllgwsgsy edpdnfvgal
      481 fgsrtdefgy ddpqlfskin rarglpdged rteayasiss qiadripavp lafpisalam
      541 sarvtsypvs pvmrevfnri dladveplpe psatpe
//
LOCUS       WP_258062161             573 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: TraM recognition domain-containing protein
            [unclassified Rathayibacter].
ACCESSION   WP_258062161
VERSION     WP_258062161.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 573)
  AUTHORS   Lu,J., Wong,J.J., Edwards,R.A., Manchak,J., Frost,L.S. and
            Glover,J.N.
  TITLE     Structural basis of specific TraD-TraM recognition during F
            plasmid-mediated bacterial conjugation
  JOURNAL   Mol Microbiol 70 (1), 89-99 (2008)
   PUBMED   18717787
REFERENCE   2  (residues 1 to 573)
  AUTHORS   Schroder,G., Krause,S., Zechner,E.L., Traxler,B., Yeo,H.J.,
            Lurz,R., Waksman,G. and Lanka,E.
  TITLE     TraG-like proteins of DNA transfer systems and of the Helicobacter
            pylori type IV secretion system: inner membrane gate for exported
            substrates?
  JOURNAL   J Bacteriol 184 (10), 2767-2779 (2002)
   PUBMED   11976307
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024108.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12696.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..573
                     /product="TraM recognition domain-containing protein"
                     /calculated_mol_wt=59374
     Region          68..>226
                     /region_name="PRK13880"
                     /note="conjugal transfer coupling protein TraG;
                     Provisional; cl46898"
                     /db_xref="CDD:481238"
     Region          157..555
                     /region_name="VirD4"
                     /note="Type IV secretory pathway, VirD4 component,
                     TraG/TraD family ATPase [Intracellular trafficking,
                     secretion, and vesicular transport]; COG3505"
                     /db_xref="CDD:442728"
ORIGIN      
        1 mnialgglva vvafggvlgl agsiaafftg hpqptagitd glgvlaapad pgtvlgapgl
       61 npfaywavvv vllgilataa lfvfrairaa rstanpnhla gtasgteiar vaspralakr
      121 astlrpsvtg kpepgdvgyl lgtskggqvw atvedsillv gpprsgkglf vlinsildap
      181 gavittstrp dnltatlrar erqgpvavfd pqqlaprlsa gmgwspvrgc qdpltamira
      241 kglatatgfg gvqdagfweg kttaaiqall haaaldgrda rtlyqwalnp tlagdavril
      301 sthpgaadgw adsldamvqa dprtrdsiwq gvslalasla dprmldavsp apgeefdpes
      361 flrdggtlyl latgagagas aalvaafied lveaarkiaa rspgarmdpp lllaldeign
      421 lsplpslptl maegggtgit tlpvlqslaq arekwgenna naildasivk iilggasnsr
      481 dlqdlstlig drdettdsvt tdaygshstq rsvrrlpilp pdvlrtlpfc tgvvmlrtar
      541 piitnlrawp rrrdadqlhr drteieqrlr aga
//
LOCUS       WP_258062162              81 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: BsuBI/PstI family type II restriction endonuclease
            [unclassified Rathayibacter].
ACCESSION   WP_258062162
VERSION     WP_258062162.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 81)
  AUTHORS   Steczkiewicz,K., Muszewska,A., Knizewski,L., Rychlewski,L. and
            Ginalski,K.
  TITLE     Sequence, structure and functional diversity of PD-(D/E)XK
            phosphodiesterase superfamily
  JOURNAL   Nucleic Acids Res 40 (15), 7016-7045 (2012)
   PUBMED   22638584
REFERENCE   2  (residues 1 to 81)
  AUTHORS   Xu,G.L., Kapfer,W., Walter,J. and Trautner,T.A.
  TITLE     BsuBI--an isospecific restriction and modification system of PstI:
            characterization of the BsuBI genes and enzymes
  JOURNAL   Nucleic Acids Res 20 (24), 6517-6523 (1992)
   PUBMED   1480472
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018339.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06616.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..81
                     /product="BsuBI/PstI family type II restriction
                     endonuclease"
                     /GO_function="GO:0000287 - magnesium ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0009036 - type II site-specific
                     deoxyribonuclease activity [Evidence IEA]"
                     /GO_process="GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /calculated_mol_wt=8440
     Region          <14..69
                     /region_name="BsuBI_PstI_RE"
                     /note="BsuBI/PstI restriction endonuclease domain;
                     pfam06616"
                     /db_xref="CDD:429034"
ORIGIN      
        1 mslidraear rksalaavgp sdqagssagl vyvscfpdra vmrkfladla seteawrasd
       61 pahmihlngd kfvgphagea s
//
LOCUS       WP_258062254             307 aa            linear   BCT 02-MAR-2025
DEFINITION  MaoC/PaaZ C-terminal domain-containing protein [Arthrobacter sp.
            B0490].
ACCESSION   WP_258062254
VERSION     WP_258062254.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. B0490
  ORGANISM  Arthrobacter sp. B0490
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Fukui,T., Shiomi,N. and Doi,Y.
  TITLE     Expression and characterization of (R)-specific enoyl coenzyme A
            hydratase involved in polyhydroxyalkanoate biosynthesis by
            Aeromonas caviae
  JOURNAL   J Bacteriol 180 (3), 667-673 (1998)
   PUBMED   9457873
REFERENCE   2  (residues 1 to 307)
  AUTHORS   Steinebach,V., Benen,J.A., Bader,R., Postma,P.W., De Vries,S. and
            Duine,J.A.
  TITLE     Cloning of the maoA gene that encodes aromatic amine oxidase of
            Escherichia coli W3350 and characterization of the overexpressed
            enzyme
  JOURNAL   Eur J Biochem 237 (3), 584-591 (1996)
   PUBMED   8647101
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013722.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01575.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Arthrobacter sp. B0490"
                     /db_xref="taxon:2058891"
     Protein         1..307
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /calculated_mol_wt=32272
     Region          201..>269
                     /region_name="hot_dog"
                     /note="The hotdog fold was initially identified in the E.
                     coli FabA (beta-hydroxydecanoyl-acyl carrier protein
                     (ACP)-dehydratase) structure and subsequently in 4HBT
                     (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A
                     number of other seemingly unrelated...; cl00509"
                     /db_xref="CDD:469797"
     Site            order(230..231,256..259)
                     /site_type="active"
                     /note="active site 2 [active]"
                     /db_xref="CDD:239537"
     Site            order(236..237,240,248..250)
                     /site_type="active"
                     /note="active site 1 [active]"
                     /db_xref="CDD:239537"
ORIGIN      
        1 msgaavqdva lpavpglpgl yrqavvlagr rrirregmps glpaarhrvd gvvadlgalt
       61 rfqqlfgaav rdrlpsaylh tlafpvalsv laradfplpl lglvhlsnev hqarqvgafe
      121 aldvvawaed lrphaagtqv dlvieasvgg eriwtgrsvy larglrtdga apavrrdgdr
      181 pafsapvptg lwrlgadtgr ryaavsgdwn pihltgptak vlgmkgaiah gmylasrmvd
      241 eavpapggal awridfaapv qlpgtvttsf araghatgrd gagsvvevvg wsagrrrphf
      301 tgwvrae
//
LOCUS       WP_258062264             447 aa            linear   BCT 02-MAR-2025
DEFINITION  BTAD domain-containing putative transcriptional regulator
            [Arthrobacter sp. B0490].
ACCESSION   WP_258062264
VERSION     WP_258062264.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. B0490
  ORGANISM  Arthrobacter sp. B0490
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 447)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015649.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03704.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Arthrobacter sp. B0490"
                     /db_xref="taxon:2058891"
     Protein         1..447
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /calculated_mol_wt=46913
     Region          25..268
                     /region_name="DnrI"
                     /note="DNA-binding transcriptional regulator
                     DnrI/AfsR/EmbR, SARP family, contains BTAD domain
                     [Transcription]; COG3629"
                     /db_xref="CDD:442847"
     Region          305..420
                     /region_name="REC_NarL-like"
                     /note="phosphoacceptor receiver (REC) domain of NarL
                     (Nitrate/Nitrite response regulator L) family response
                     regulators; cd17535"
                     /db_xref="CDD:381090"
ORIGIN      
        1 mitlelantt ghavhvppat ppshrlqvsv fgpltirrgd tllgandlgg pkprqvleil
       61 lmnfgsavsk trimdllwgg nhpavalptl esyvsvlrrn lqpgngrtgp lrtvtggyai
      121 drtlvdldld rfetltrlag qadparalal ltealelasa pllgdellpa waeeeragha
      181 arvglvrvla aeaalsvgea gtaialagaa akedplnera wtalilgler ngentealra
      241 fdrcrriidr elgcapglvl kdaharllvs tatagpsngp rplpedtvrs pvaltgrpea
      301 krlrilivdd httfsdllag aldrepdlks vgaaksvasa vtmfrdlrpd vvimdlylsd
      361 gsglsaaari laeapgtriv mltgnpsqqa lseaarmgic gflpkdgalg vmldtlrhah
      421 vggmivnpsl verwgrsass apgpagq
//
LOCUS       WP_258062271            1046 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Arthrobacter sp. B0490].
ACCESSION   WP_258062271
VERSION     WP_258062271.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. B0490
  ORGANISM  Arthrobacter sp. B0490
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019170.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07532.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Arthrobacter sp. B0490"
                     /db_xref="taxon:2058891"
     Protein         1..1046
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=110888
     Region          29..515
                     /region_name="XynC"
                     /note="O-Glycosyl hydrolase [Cell wall/membrane/envelope
                     biogenesis]; COG5520"
                     /db_xref="CDD:444271"
     Region          531..657
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cd00161"
                     /db_xref="CDD:467293"
     Site            order(544..546,552,554,561..562)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(585..586,598,600,607..608)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(632..634,645,647,654..655)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Region          667..>709
                     /region_name="Big_4"
                     /note="Bacterial Ig-like domain (group 4); pfam07532"
                     /db_xref="CDD:400079"
     Region          745..799
                     /region_name="Big_4"
                     /note="Bacterial Ig-like domain (group 4); pfam07532"
                     /db_xref="CDD:400079"
     Region          838..958
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
ORIGIN      
        1 mlaaasligv aapaqaappa ppappaapeg altltpdpsy qgeefegwgt slvwfanatg
       61 dypdeirngl aelvfgpegl nlniarynig ggnapdvkdy lrpggavegw wnapegttre
      121 dtawwdpedp adwnleadat qrwwidrikq dithwetfsn sppyfqtvsg yvsggfnsta
      181 dqlkpesisd fnaylvrvte eiekahgiev dtldpfnepn tnywstrlga dgnptggrqe
      241 gahlspqlqq qvlrdlatkl etssanatis amdetnpglf atnwnsyped vrnlvdqlnv
      301 htygtdqrtt vrdiakaedk plwmsevegs wgdgqsftsm epglgmakri tddlrelept
      361 awvfwqpved ydnmkpgges aaganwgsiq mpfdctdadt lescpiytnt kfntvrnyth
      421 yiqpgdrlvg vndedttaav tetgaavvhi nestentpvv ldfskfgsia qgatvipvvs
      481 dangalvese pvaidggsav vtapaesvtt fvvegvsgia edaaaiqdgh vyrlqgvqsg
      541 ksietaggta vistsdtadt qqlfrftslg edntnqerys ittldgasql adeggaavia
      601 pagsnpraew iasttgdgty tfvnaetdll levgggstae gapvtlylan sganqrwtli
      661 detvlgvepa taftvpgtap vlpetvtpvy rdgargaipv twskipndnr wkkpgtvtvt
      721 gtatdnlgnt fptevvvtvd klvstqpara ktvvnsvptl patvtavgsm ggtlerpvtw
      781 ntpvsystpg iyeltgqada gngttlpaiv likvterape niaddggtta tatftergyg
      841 ttglfngnlq dkawsnwkps nknltdtltv nlrqaqplsg vkvhffrdgs sdsyaqtvql
      901 qvqgadgqws dsgapvtvpa gapapvvtlp ingvtaqsvr vvmtarsnth mvvseievld
      961 wvpvtsvept lsgisinnap vpgfspdtmt ysvqargklp tvtatatdpy stlaitqptq
     1021 gtrtavievt sedgttttty rvdltk
//
LOCUS       WP_258062285            1001 aa            linear   BCT 02-MAR-2025
DEFINITION  immunoglobulin-like domain-containing protein [Rathayibacter sp.
            AY1A1].
ACCESSION   WP_258062285
VERSION     WP_258062285.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1A1
  ORGANISM  Rathayibacter sp. AY1A1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042837.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20578.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Rathayibacter sp. AY1A1"
                     /db_xref="taxon:2080519"
     Protein         1..1001
                     /product="immunoglobulin-like domain-containing protein"
                     /calculated_mol_wt=103099
     Region          <202..268
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          295..364
                     /region_name="aBig_2"
                     /note="Atrophied bacterial Ig domain; pfam20578"
                     /db_xref="CDD:466727"
     Region          377..467
                     /region_name="aBig_2"
                     /note="Atrophied bacterial Ig domain; pfam20578"
                     /db_xref="CDD:466727"
     Region          504..819
                     /region_name="GH43_Bt3655-like"
                     /note="Glycosyl hydrolase family 43 protein such as
                     Bacteroides thetaiotaomicron VPI-5482 arabinofuranosidase
                     Bt3655; cd08983"
                     /db_xref="CDD:350097"
ORIGIN      
        1 mrrrspeppa aaprrrvrsl flsalactsv altgalvpvs aqavdvpapt ahydmshags
       61 alldisgngr natltgltda sfanaggdqv arfkndgyas lpqglvtgad nafaveytvk
      121 tqttanqfgw vigdgvgpwn ttqlgnhvfv nprnpdgsps gqvlagirvk eptnngetrm
      181 pfggtlnpgf ttltlvgtgt gsstvltlyr dgtqistant tksmasivpt gstlgylgrs
      241 lysgdalvta dvtdvkfwdt sltaeqvass mptaaakasa tsallrsdiq pvllagnpsl
      301 tqvssnltlp astsgvpltw tssnsavvsa tgvvsrsiaq ntpvtltatt aqgatiafev
      361 vvlapsindd ldalklatrt tenlplavkg arngtditwt ssdpalvtpt ntsyaapavg
      421 aadpyrgggv vtrpaygsgd rtvtltatat lngvtetraf tltvaelgrt apdagyasay
      481 fksdgdekiy qaatsgndff tfspvnggka vitsttdtkg lrdpfilrsh ngdkyymvat
      541 dlciscgtgw gdaqskgslk ievwestdlv qwtrtngadt gitvnqpaag mtwapeaywd
      601 dalqsyvvff ssrlysdatk tnsdklyarv fsvitrdfrt ftappatwqd tgyaridsti
      661 tkigdyyyrf tkneeggaag tleagkdifl ekskvltagt tssnwsadpn ttwqltdtrm
      721 tsletgqage gpeiiklnag dpndttgtgd gyaflvdnyg dggykaflts gaaiagssqt
      781 nrlsqsadwn vspksraglp asprhgafvs vpqtvltamk nwtgvtavds tttltadgrt
      841 vtatvaaadk gdvvgsvtft ggswtstvpl sggsasvsvp advtgvtasy tgyadklvrt
      901 svsaavpldt lelvsavatr cvagkivlta tvkntdtaaa dvtitsaygs ksftavapgs
      961 sasaafttrl astpagtvtv tgsatgqpaf tatvpvaaar c
//
LOCUS       WP_258062300             376 aa            linear   BCT 02-MAR-2025
DEFINITION  SIS domain-containing protein [Rathayibacter sp. AY1G9].
ACCESSION   WP_258062300
VERSION     WP_258062300.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1G9
  ORGANISM  Rathayibacter sp. AY1G9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 376)
  AUTHORS   Bateman,A.
  TITLE     The SIS domain: a phosphosugar-binding domain
  JOURNAL   Trends Biochem Sci 24 (3), 94-95 (1999)
   PUBMED   10203754
REFERENCE   2  (residues 1 to 376)
  AUTHORS   Teplyakov,A., Obmolova,G., Badet-Denisot,M.A., Badet,B. and
            Polikarpov,I.
  TITLE     Involvement of the C terminus in intramolecular nitrogen channeling
            in glucosamine 6-phosphate synthase: evidence from a 1.6 A crystal
            structure of the isomerase domain
  JOURNAL   Structure 6 (8), 1047-1055 (1998)
   PUBMED   9739095
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013539.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01380.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Rathayibacter sp. AY1G9"
                     /db_xref="taxon:2080565"
     Protein         1..376
                     /product="SIS domain-containing protein"
                     /GO_function="GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA]"
                     /GO_process="GO:1901135 - carbohydrate derivative
                     metabolic process [Evidence IEA]"
                     /calculated_mol_wt=40311
     Region          82..363
                     /region_name="AgaS"
                     /note="Fructoselysine-6-P-deglycase FrlB or related
                     protein, duplicated sugar isomerase (SIS) domain [Cell
                     wall/membrane/envelope biogenesis]; COG2222"
                     /db_xref="CDD:441824"
     Region          83..179
                     /region_name="SIS"
                     /note="SIS domain. SIS (Sugar ISomerase) domains are found
                     in many phosphosugar isomerases and phosphosugar binding
                     proteins. SIS domains are also found in proteins that
                     regulate the expression of genes involved in synthesis of
                     phosphosugars; cl00389"
                     /db_xref="CDD:444881"
ORIGIN      
        1 mtaygyarsg airprrrrgr aeprltsapr aprhsraadd psgrpeavsg aevplpgnvr
       61 radgrqgrsr iddhvaslpa vdrvflvgag rslmgvqaaq ylldtaaitp aasynsdeff
      121 frapasvgpg alvvvlsgtg etpetvrage waqergaavv gvtlkqegpl alaldtafva
      181 qtgqgtqlvl qllalavlrr dgvdvtdrle alralpsamv atvaafeara eelaaamkdv
      241 pvtylvtsgs lmgpgqtftt cylqemqwmh aatinadeff qgpfevfdge tqslvflaed
      301 atrpmgerar sfldqysgtt hyvdsrdlel pgiaapqral vaplvystlv srlaahwaav
      361 rgyalegrry mwqfay
//
LOCUS       WP_258062311             478 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Rathayibacter sp. AY1A1].
ACCESSION   WP_258062311
VERSION     WP_258062311.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1A1
  ORGANISM  Rathayibacter sp. AY1A1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 478)
  AUTHORS   Dutta,R. and Inouye,M.
  TITLE     GHKL, an emergent ATPase/kinase superfamily
  JOURNAL   Trends Biochem Sci 25 (1), 24-28 (2000)
   PUBMED   10637609
REFERENCE   2  (residues 1 to 478)
  AUTHORS   Stock,J.
  TITLE     Signal transduction: Gyrating protein kinases
  JOURNAL   Curr Biol 9 (10), R364-R367 (1999)
   PUBMED   10339418
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10612637
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Rathayibacter sp. AY1A1"
                     /db_xref="taxon:2080519"
     Protein         1..478
                     /product="ATP-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=53138
     Region          14..149
                     /region_name="HATPase_c_3"
                     /note="Histidine kinase-, DNA gyrase B-, and HSP90-like
                     ATPase; pfam13589"
                     /db_xref="CDD:433332"
     Site            order(20,24,27,47,49,51,53,83..86,99,101,110)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340391"
     Site            order(60,86)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340391"
ORIGIN      
        1 mellesmrsv gysfhaaiad lvdnsisaga vrveivgdpv dssfltvldd gagmspdear
       61 talqlagsar tttragndlg rfglglktas lsqarrltvl trknaqttal qwdidhvlss
      121 gewslsvlae neytslprad allsrpsgtl ivwqeldyml gaasrpdlvm aerladlrgh
      181 lsltfhrfld dgtrsplvis vngldvpald pflsknprtq qshrepltie gqriefqayt
      241 lphpsalskk drerwdlsag mrerqgfyiy rnrrlisygh wfglsrreel skqsrvmvdi
      301 pntvdhlwql dikksraepp qafrlhfrrv mdkvidrskr vhtfrgrrvs getiarmwdk
      361 itdregsryq vnaehplvaa lqetmtdeqk rqlsrlltdl aqtfptadly ieaakgqtst
      421 apaaatadvl aqlaalrrsg gfgdlppaqv astlratepf drvedldgli tqiwsapa
//
LOCUS       WP_258062314             218 aa            linear   BCT 02-MAR-2025
DEFINITION  HAD hydrolase-like protein [Arthrobacter sp. B0490].
ACCESSION   WP_258062314
VERSION     WP_258062314.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. B0490
  ORGANISM  Arthrobacter sp. B0490
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024811.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13419.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Arthrobacter sp. B0490"
                     /db_xref="taxon:2058891"
     Protein         1..218
                     /product="HAD hydrolase-like protein"
                     /calculated_mol_wt=22178
     Region          5..214
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     Site            order(8..12,107..108,144,166..167,170..171)
                     /site_type="active"
                     /db_xref="CDD:319763"
ORIGIN      
        1 mrslilfdld gtlvdpagai tggisealrr hglpvpddat lqamvgpplv rslislagvp
       61 gsrvqdvldt yragyvdtgm arsrpypgia rcvdavargg avvavatqkp ewlaeellav
      121 qglrhlfasv hgsprdesaa pdgkaaiira aldrhpdaag savmvgdrrh dvegaaangl
      181 pcigvgwgfa apgeleeaga aavvqsadel levlggsl
//
LOCUS       WP_258062367             349 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Arthrobacter sp. B0490].
ACCESSION   WP_258062367
VERSION     WP_258062367.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. B0490
  ORGANISM  Arthrobacter sp. B0490
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Arthrobacter sp. B0490"
                     /db_xref="taxon:2058891"
     Protein         1..349
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=38124
     Region          5..340
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mvesfddidi yclwnddpmr ygsrqiyetv lartplrhrk vlalpaalvt wrhlpaiqky
       61 dwalvsshsf ahharfsknp dlkklvyvht paryiwapea dargrslaar tagpmlrtld
      121 rqrakeiysa aanskfvaqr ierswgidas tiyppvdvsr iqaksdwsas ltgpdadllg
      181 slpsdfilga srfveykkle tvidiavsmg vaaviagsgp demrlrahak ergalaifil
      241 kpsdsllyal yqqallyvfp aledfgimpv eamaagalvl anevggtset vedgrtgala
      301 nfcskasite avqralsgqa slsrsramkf sdavfrssls swvasktgi
//
LOCUS       WP_258062505             423 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: acyl-CoA dehydrogenase family protein [unclassified
            Rathayibacter].
ACCESSION   WP_258062505
VERSION     WP_258062505.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 423)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 423)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02771.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..423
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=45546
     Region          39..417
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(115,145,147,171,173,400..402,404,406)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mtttaptttg adaattigaa aehwstaprp dspdawlvra eevaavlatd alerdragaa
       61 pfaevallka aglvtllgpa ehgggaqewt talrvvrtva rgdgsigqll gyhylwawaa
      121 rlvgtpeqii aveqlategd llyggavnpr dsdltvreeg delvftgrks fstggvvsdl
      181 tvlegvlegt dthlfaivpt dqegivfgrd wdslgqrlte sgsveirgvr vpwaaaagfv
      241 drvyrplvyn tlnvpviqqv faefylgiaq galeraaqyt rertrawpyg gddkeragde
      301 wyvlegygdl qsrlwadeal idatgaalsa alhapreelt prrrgeiavr iaaakarive
      361 dglatatrif eltgarasas svgldlywrn lrthslhdpl pykrrevgvf alldtvpeps
      421 wyt
//
LOCUS       WP_258062647             173 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: tetratricopeptide repeat protein [unclassified
            Rathayibacter].
ACCESSION   WP_258062647
VERSION     WP_258062647.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12688.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..173
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=18344
     Region          52..168
                     /region_name="TPR_5"
                     /note="Tetratrico peptide repeat; pfam12688"
                     /db_xref="CDD:403783"
ORIGIN      
        1 mtetrasdpd rseidalalw laaverldaq ddpdgvverm rvlaarypgh dgvaafelgg
       61 aldsagheae aaveyerala dgldderrar ltiqyastlr nlgrtdeaid llagaaahpa
      121 vgsarevfla lalhsagrvd ealrialeal apglpryqrs vrayaaaltd seq
//
LOCUS       WP_258062675             120 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6804 family protein [unclassified Rathayibacter].
ACCESSION   WP_258062675
VERSION     WP_258062675.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042853.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20619.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..120
                     /product="DUF6804 family protein"
                     /calculated_mol_wt=12606
     Region          28..108
                     /region_name="DUF6804"
                     /note="Family of unknown function (DUF6804); pfam20619"
                     /db_xref="CDD:466768"
ORIGIN      
        1 mstrkpsrat aarypsrdra rmalapgilg aivllaglal vgsdaydfir ypvailaavi
       61 gwfaiqaral lwliglvpvl vlwnpvvpfa fpdaiwssls laavgvfvaa glvirvptpe
//
LOCUS       WP_258062700             900 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: alpha/beta fold hydrolase [unclassified
            Rathayibacter].
ACCESSION   WP_258062700
VERSION     WP_258062700.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 900)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..900
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=92963
     Region          66..324
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     Region          351..894
                     /region_name="PRK09274"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:236443"
ORIGIN      
        1 mtaphpaeri rgalgstaaa qlppagldgl dpawsrlvda pdaqgvprrw hlldtgealg
       61 tepvgtvlcv hgnptwsylw rrlaaatles arrggpawrv vavdqlemgf sertgalhtl
      121 adrvrelsdl tdvlglddvv tlghdwggvv slgwavdhpa qlratmllnt aihqsadepi
      181 paplrlalas gvlgastvgt paflettlal ghpalppavk egyrapyrsa srrggvggfv
      241 adipvdsahp sdpelqriae gvsalttpal mlwgpldpif sdrylddlvd rlphaqvhry
      301 egaghlvaed vdyasavltw lgdlsdgeep fggdpapdvr rptapveplw ahldrnaqdd
      361 slalvemapp ggggprsvsw rllsqrvrel aaglrasgvs pgdrvsllvp pgadltally
      421 aclrigavvv vadaglglrg ltravrgawp dlvvgalpgl avaralrwpg grvstqtlpr
      481 asasalgvdt slgqlielgr aelaadpeal geapaadava ailftsgstg pakgvvythr
      541 qlagvrdala rqygigpgtg lvagfapfal lgpalgtrsa tpdmdvtapr tltaaavaaa
      601 aarvdatvlf lspaalanvv atagaldtdd hralagvrtf lsagapvsag llgeaqalmp
      661 nasartpygm tegllltdas legireaasd ddprggvcvg vpaagvrlri apldadgrae
      721 depeeitgtt geivvsaghv edhyerlwlt draarigavp gerwhrtgdv gridsagrlw
      781 vegrmphvvv tpdgvvtpvg peqriearva pvaraaivga gprgvaqlva vvelrsgarr
      841 vvlaeealaa evraavgrpv aavlvvpalp tdirhnskid raalsrwaeg vlaggrmvap
//
LOCUS       WP_258062705              52 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma factor-like helix-turn-helix DNA-binding protein
            [Arthrobacter sp. B0490].
ACCESSION   WP_258062705
VERSION     WP_258062705.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. B0490
  ORGANISM  Arthrobacter sp. B0490
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 52)
  AUTHORS   Campbell,E.A., Muzzin,O., Chlenov,M., Sun,J.L., Olson,C.A.,
            Weinman,O., Trester-Zedlitz,M.L. and Darst,S.A.
  TITLE     Structure of the bacterial RNA polymerase promoter specificity
            sigma subunit
  JOURNAL   Mol Cell 9 (3), 527-539 (2002)
   PUBMED   11931761
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04545.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..52
                     /organism="Arthrobacter sp. B0490"
                     /db_xref="taxon:2058891"
     Protein         1..52
                     /product="sigma factor-like helix-turn-helix DNA-binding
                     protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=5799
     Region          <1..45
                     /region_name="PRK09646"
                     /note="ECF RNA polymerase sigma factor SigK"
                     /db_xref="CDD:182015"
ORIGIN      
        1 mqreaiylay ytgmtyteva erlgipipta ktrirdgikr lrialqdars sa
//
LOCUS       WP_258062706             731 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: glycoside hydrolase domain-containing protein
            [unclassified Rathayibacter].
ACCESSION   WP_258062706
VERSION     WP_258062706.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 731)
  AUTHORS   Naumoff,D.G.
  TITLE     GH97 is a new family of glycoside hydrolases, which is related to
            the alpha-galactosidase superfamily
  JOURNAL   BMC Genomics 6, 112 (2005)
   PUBMED   16131397
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 731)
  AUTHORS   Liu,Y., Choudhury,P., Cabral,C.M. and Sifers,R.N.
  TITLE     Oligosaccharide modification in the early secretory pathway directs
            the selection of a misfolded glycoprotein for degradation by the
            proteasome
  JOURNAL   J Biol Chem 274 (9), 5861-5867 (1999)
   PUBMED   10026209
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019583.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07971.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..731
                     /product="glycoside hydrolase domain-containing protein"
                     /calculated_mol_wt=79773
     Region          2..725
                     /region_name="COG3537"
                     /note="Putative alpha-1,2-mannosidase [Carbohydrate
                     transport and metabolism]"
                     /db_xref="CDD:442758"
ORIGIN      
        1 mdpflgteat alpeptglaa twwspkpqig nthpgatypl gmvsacsysg ayptgygryd
       61 lalegvpptl hdgleasgft hfqqsgtgai rkyynylrvt pmlepldelg rswaledeva
      121 epgyyaatls sgvraeltvg pasvvhrytf pehrsarvvi dlslgglaip sgatvplraq
      181 lhsispgvaa gevvmegapl avhlecdalq wrqmlwydrr lmpggtrldf dhirpttlrp
      241 fglmwagpst agqtvelrmg fslrgtdrar enlhrdvppa gtgfdqrrdr trktwrkrlr
      301 tiavdapsae retvfstaly hslikpclap sespfwpadg pfvfdistmw diyrtqlpll
      361 tmllperave iaaalltice eegnfpigyr makgsdrfsr qgsalahtfl adlcrlglpg
      421 idwdaalvhm sedlkrmyge eflaageahp ishtldlahg ywctavvarh vgdlelaeql
      481 eeraaqwvna fdlrsgllkd styyegtrhn ysfrllhdma grialsggde gfvaqldeff
      541 gygaepvvql glrperseml agaelgrfeg lnnepdmdsp wayhyagrpd rtaeivhgvl
      601 hqrfgagrgg lpgnddsggl sswyvwaslg lfpvagqglv lvnapsfara svaiggadfe
      661 irttgfvepe pggpvqyvqs aefdgapllt svltaaalhr ggelllhlgp epsdwgtlpe
      721 hrppswparr h
//
LOCUS       WP_258062717             289 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ATP-binding cassette domain-containing protein
            [unclassified Rathayibacter].
ACCESSION   WP_258062717
VERSION     WP_258062717.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 289)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 289)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 289)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 289)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..289
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=31066
     Region          <2..269
                     /region_name="GsiA"
                     /note="ABC-type glutathione transport system ATPase
                     component, contains duplicated ATPase domain
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1123"
                     /db_xref="CDD:440740"
ORIGIN      
        1 msrtaedqap ivvddlsvey pprgisrrwt alrgvslrve pgevlgilgg sgsgkstlar
       61 vlggdglghd ggrtrpviig gdatvaghrl rslparelkr ftvdvahlaq dagaalrpel
      121 tvseliaepi flrdrhydpk aaavrvatll dsvhlplfll drypyelssg qrqrvavars
      181 lvlgpkvlia deptsgidat vresivdlla dlrrregfaa vvvshdidvl srstdriavl
      241 vggevvaygp llevliearh pyvrelgaaf aeyerfdasr aqrveaadq
//
LOCUS       WP_258062730             985 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: immunoglobulin-like domain-containing protein
            [unclassified Rathayibacter].
ACCESSION   WP_258062730
VERSION     WP_258062730.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042837.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20578.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..985
                     /product="immunoglobulin-like domain-containing protein"
                     /calculated_mol_wt=101216
     Region          <186..252
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          279..348
                     /region_name="aBig_2"
                     /note="Atrophied bacterial Ig domain; pfam20578"
                     /db_xref="CDD:466727"
     Region          361..451
                     /region_name="aBig_2"
                     /note="Atrophied bacterial Ig domain; pfam20578"
                     /db_xref="CDD:466727"
     Region          488..803
                     /region_name="GH43_Bt3655-like"
                     /note="Glycosyl hydrolase family 43 protein such as
                     Bacteroides thetaiotaomicron VPI-5482 arabinofuranosidase
                     Bt3655; cd08983"
                     /db_xref="CDD:350097"
ORIGIN      
        1 mrslflsala ctsvaltgal vpvsaqavdv paptahydms hagsalldis gngrnatltg
       61 ltdasfanag gdqvarfknd gyaslpqglv tgadnafave ytvktqttan qfgwvigdgv
      121 gpwnttqlgn hvfvnprnpd gspsgqvlag irvkeptsng etrmpfggtl npgfttltlv
      181 gtgtgsstvl tlyrdgtqis tanttksmas ivptgstlgy lgrslysgda lvtadvtdvk
      241 fwdtsltaeq vassmptaaa kasatsallr sdiqpvllag npsltqvssn ltlpasssgv
      301 pltwtssnsa vvsatgvvsr siaqntpvtl tattaqgati afevvvlaps inddldalkl
      361 atrttenlpl avkgarngtd itwtssdpal vtptntsyaa pavgaadpyr gggvvtrpay
      421 gsgdrtvtlt atatlngvte traftltvae lgrtapdagy asayfksdgd ekiyqaatsg
      481 ndfftfspvn ggkavitstt dtkglrdpfi lrshngdkyy mvatdlcisc gtgwgdaqsk
      541 gslkievwes tdlvqwtrtn gadtgitvnq paagmtwape aywddalqsy vvffssrlys
      601 datktnsdkl ysrvfsvitr dfrtftappa twqdtgyari dstitkigdy yyrftkneeg
      661 gaagtleagk diflekskvl tagttssnws adpnttwqlt dtrmtsletg qagegpeiik
      721 lnagdpndtt gtgdgyaflv dnygdggyka fltsgaaiag ssqtnrlsqs adwnvspksr
      781 aglpasprhg afvsvpqtvl tamknwtgvt avdsttslta dgrtvtatva aadkgdvvgs
      841 vtftggswts tvplsggsas vsvpagvtgv tasytgyadk lvrtsvsavv pldtlelvpa
      901 vatrcvagki vltatvkntd taaadvtits aygsksftav apgssasaaf ttrlasmpag
      961 tvtvtgsatg qpaftatvpv aaarc
//
LOCUS       WP_258062763             230 aa            linear   BCT 02-MAR-2025
DEFINITION  polysaccharide deacetylase family protein [Arthrobacter sp. B0490].
ACCESSION   WP_258062763
VERSION     WP_258062763.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. B0490
  ORGANISM  Arthrobacter sp. B0490
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 230)
  AUTHORS   Freiberg,C., Fellay,R., Bairoch,A., Broughton,W.J., Rosenthal,A.
            and Perret,X.
  TITLE     Molecular basis of symbiosis between Rhizobium and legumes
  JOURNAL   Nature 387 (6631), 394-401 (1997)
   PUBMED   9163424
REFERENCE   2  (residues 1 to 230)
  AUTHORS   Mishra,C., Semino,C.E., McCreath,K.J., de la Vega,H., Jones,B.J.,
            Specht,C.A. and Robbins,P.W.
  TITLE     Cloning and expression of two chitin deacetylase genes of
            Saccharomyces cerevisiae
  JOURNAL   Yeast 13 (4), 327-336 (1997)
   PUBMED   9133736
REFERENCE   3  (residues 1 to 230)
  AUTHORS   Millward-Sadler,S.J., Poole,D.M., Henrissat,B., Hazlewood,G.P.,
            Clarke,J.H. and Gilbert,H.J.
  TITLE     Evidence for a general role for high-affinity non-catalytic
            cellulose binding domains in microbial plant cell wall hydrolases
  JOURNAL   Mol Microbiol 11 (2), 375-382 (1994)
   PUBMED   8170399
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013672.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01522.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Arthrobacter sp. B0490"
                     /db_xref="taxon:2058891"
     Protein         1..230
                     /product="polysaccharide deacetylase family protein"
                     /GO_function="GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=23595
     Region          31..225
                     /region_name="CE4_SF"
                     /note="Catalytic NodB homology domain of the carbohydrate
                     esterase 4 superfamily; cl15692"
                     /db_xref="CDD:472828"
ORIGIN      
        1 miarfagrpp sywgleaprv ltylpqgpag ialtldfcgg pggdgadlti idllrrlqvp
       61 atlflngrwi tanpaltqdl aadslfeian hgtnhyplsv sgaaaygisg tegagsvyde
      121 iminnarlte ltgkrprffr pgtaylddva adiclaldli pagfslnadg gatypavmva
      181 aetgaavpgs iiiahgnhpg sgtgpglaqa lphllakgrt fttlstamtp
//
LOCUS       WP_258062794             288 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: SDR family oxidoreductase [unclassified
            Rathayibacter].
ACCESSION   WP_258062794
VERSION     WP_258062794.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..288
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=30124
     Region          5..287
                     /region_name="PRK12748"
                     /note="3-ketoacyl-(acyl-carrier-protein) reductase;
                     Provisional"
                     /db_xref="CDD:237189"
ORIGIN      
        1 msallplqgr talvtgvsrr rgigfavaar laslgahlvv hhhrphdldl pwggddldav
       61 rselrahlte garfadvaad ladpstipgl iataadltgs ldvlvcnhak sgddgsildm
      121 tperltafwd vntrstlllt aefarrrapr sdgprrpgdr ivgagpyara qghvfwmtsg
      181 qihgamrgev ayaaskaala gvtatvaael lelgivlnti dpgpvntgyl dpettdrsle
      241 dleeyvastp fgrvgtpadp aelvawlats agswvvgqvl ttdggfsl
//
LOCUS       WP_258062876             403 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: cupin domain-containing protein [unclassified
            Rathayibacter].
ACCESSION   WP_258062876
VERSION     WP_258062876.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 403)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012417.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00190.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..403
                     /product="cupin domain-containing protein"
                     /GO_function="GO:0045735 - nutrient reservoir activity
                     [Evidence IEA]"
                     /calculated_mol_wt=44241
     Region          32..393
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     Site            order(87,97..98,100,102,119,121,123,125,150,152,172,174,
                     176,202)
                     /site_type="other"
                     /note="intramolecular domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:380438"
     Site            order(103,111,114,116,120,159,173,175)
                     /site_type="active"
                     /db_xref="CDD:380438"
ORIGIN      
        1 mepddstaph hetpgfgdpd lpqegivnte gdpsantmtg pqnrvleglf pnqiaapatd
       61 istqpffwss fnisprrvqr ggwareltqa dfaisneiag vnmyleaggi relhwhqsae
      121 walmtkgncr ittlsrtgrp svddvqegdl wyfppglphs lqglgpdgae fvlafddgeq
      181 sesntllltd wfahtppdvl aknfgvaqev frdiplhdlw ifpgdvpgdl qadraaagvq
      241 dgdeavifrl srsepayqns ggriqiadst nfpasrtvsa alttvepgsm relhwhpnad
      301 ewqyylrgsa rmtvfntgph anttdfhagd vgvvrrnfgh yventgddtl vyietfkssr
      361 yeevslaqwl shlppslvaq hlnipeevla tfplgtqgit plr
//
LOCUS       WP_258062904             467 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rathayibacter sp. AY1C6].
ACCESSION   WP_258062904
VERSION     WP_258062904.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1C6
  ORGANISM  Rathayibacter sp. AY1C6
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Rathayibacter sp. AY1C6"
                     /db_xref="taxon:2080539"
     Protein         1..467
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47232
     Region          25..373
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(28..29,32..33,36,67,117..118,120..122,125,145,
                     148..149,152,270,273..274,277..279,282,310,314,367..368,
                     372)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mrsrdrrgit saplllttig ttslvflcaf eslavttimp ivsadldgra lyplafaatl
       61 aaavvgmvaa gssadrrgpt pslvvaillf tlglvaagaa qsmpvfvaar llqglgsggi
      121 tvtlyvlvar vypselhpri fgafaaawvv pslvgplvag vvaelaswhw vffgvvalva
      181 lasaaiaptl rsleprerlp fdrravgria ravvvsagvv vlstsaelap dlagllaaaa
      241 vvvvvvavra llpagtlrar svlpsvillr alvaaaffgt evylplllse qyglppwlsg
      301 amltagavsw algsniqgrp gtrlshggam rlgtslvlag igvvllvtvl alspivagvg
      361 wflagggmgt mfprmgtmtl alsapgregf nssalqiads tgasvslalt gllaaavtgl
      421 igagtgvfaa tfsyaaliai vavglagrld gllrregrre paeqaql
//
LOCUS       WP_258062953             288 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Rathayibacter sp. AY1C6].
ACCESSION   WP_258062953
VERSION     WP_258062953.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1C6
  ORGANISM  Rathayibacter sp. AY1C6
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Rathayibacter sp. AY1C6"
                     /db_xref="taxon:2080539"
     Protein         1..288
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=30169
     Region          5..287
                     /region_name="PRK12748"
                     /note="3-ketoacyl-(acyl-carrier-protein) reductase;
                     Provisional"
                     /db_xref="CDD:237189"
ORIGIN      
        1 msallplqgr talvtgvsrr rgigfavaak laslgahlvv hhhrphdldr pwggddldav
       61 rselrahlte garfvdvaad ladpstipgl iataadltgs ldvlvcnhak sgddgsildm
      121 tperltafwd vntrstlllt aefarlrapr tdgprrpgdr ivgagpyara qghvfwmtsg
      181 qihgamrgev ayaaskaala gvtatvaaev lelgivlnti dpgpvntgyl dkettdrsle
      241 dleeyvastp fgrvgtpadp aeliawlats agswvvgqvl ttdggfsl
//
LOCUS       WP_258062971             301 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY-family carbohydrate kinase, partial [Rathayibacter sp. AY1C6].
ACCESSION   WP_258062971
VERSION     WP_258062971.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1C6
  ORGANISM  Rathayibacter sp. AY1C6
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 301)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 301)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02782.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Rathayibacter sp. AY1C6"
                     /db_xref="taxon:2080539"
     Protein         <1..301
                     /product="FGGY-family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <12..237
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 gargdgvgrh hagapacppe gdagtgmvat nsvaprtgnv sagtsifamv vlegplesvh
       61 heldlvatpa gdlvamvhcn ngaselagwv glfsrfaaas ggpsdsdavy gtlfaealeg
      121 eadaggllay nhlagepiag lvegrplvvr tpdsrltlan fmraqlygvf gtlalgmrvl
      181 agegvridem fahggmfrta gvaqrflaga ldapvsvaat aseggpwgma vlaayrlqsg
      241 valdayltdq vfgdsgfetv apdaddvagf sayleryrag laveqtavet ltdpqnqgat
      301 a
//
LOCUS       WP_258063046             133 aa            linear   BCT 02-MAR-2025
DEFINITION  recombinase family protein [Rathayibacter rathayi].
ACCESSION   WP_258063046
VERSION     WP_258063046.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter rathayi
  ORGANISM  Rathayibacter rathayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 133)
  AUTHORS   Yang,W. and Steitz,T.A.
  TITLE     Crystal structure of the site-specific recombinase gamma delta
            resolvase complexed with a 34 bp cleavage site
  JOURNAL   Cell 82 (2), 193-207 (1995)
   PUBMED   7628011
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012464.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00239.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Rathayibacter rathayi"
                     /db_xref="taxon:33887"
     Protein         1..133
                     /product="recombinase family protein"
                     /GO_function="GO:0000150 - DNA strand exchange activity
                     [Evidence IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /calculated_mol_wt=14009
     Region          1..>58
                     /region_name="SpoIVCA"
                     /note="Site-specific DNA recombinase SpoIVCA/DNA invertase
                     PinE [Replication, recombination and repair]; COG1961"
                     /db_xref="CDD:441564"
ORIGIN      
        1 mrflaylrvs kadklrgerl glkaqraltt aerngwdivg wyeddgvsgk stdrpglqpa
       61 faalrlgrrg wrrassppns tgcrgrsatl etgstcrtgn aepspspsps pspspspspt
      121 stststpapr rvg
//
LOCUS       WP_258063063             294 aa            linear   BCT 02-MAR-2025
DEFINITION  ROK family protein, partial [Rathayibacter rathayi].
ACCESSION   WP_258063063
VERSION     WP_258063063.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter rathayi
  ORGANISM  Rathayibacter rathayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Rathayibacter rathayi"
                     /db_xref="taxon:33887"
     Protein         1..>294
                     /product="ROK family protein"
     Region          14..253
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mtqpqdgllp rfavgvdigg tsikaslvdv ttgeraarrf avanplgkep edfaaaiagi
       61 vrdvspiagt pvgvgfpgiv rggivrqtth vsqrwvglda qallseatgv dvvvvndada
      121 agvaerefga mhgregllll ttlgtgigta lvhegvvipn selghlhidg pdfepqvgfs
      181 avrregitle ewagrlgvyy rhlemllspq lfviggaaah vfdefarfld igteivparf
      241 gndagftgaa mvavspdrla pwyrstrgar esgvvaeagr ndlgadveea relv
//
LOCUS       WP_258063109             141 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: VOC family protein [unclassified Pseudoclavibacter].
ACCESSION   WP_258063109
VERSION     WP_258063109.1
KEYWORDS    RefSeq.
SOURCE      unclassified Pseudoclavibacter
  ORGANISM  unclassified Pseudoclavibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 141)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="unclassified Pseudoclavibacter"
                     /db_xref="taxon:2615177"
     Protein         1..141
                     /product="VOC family protein"
                     /calculated_mol_wt=14939
     Region          2..122
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mtfatrdlde arrfysealg weplldvvge vlffqigagq vlgffdaekf drdlgtgeqr
       61 stvsgvtlah nvgsreevva vvsamasggg vmlkvpqege fggvfhglve dpngvvweva
      121 hnpgwavlpd gsvvfdqagq e
//
LOCUS       WP_258063138             521 aa            linear   BCT 02-MAR-2025
DEFINITION  cryptochrome/photolyase family protein [Pseudoclavibacter sp.
            Z016].
ACCESSION   WP_258063138
VERSION     WP_258063138.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. Z016
  ORGANISM  Pseudoclavibacter sp. Z016
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016158.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04244.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Pseudoclavibacter sp. Z016"
                     /db_xref="taxon:2080581"
     Protein         1..521
                     /product="cryptochrome/photolyase family protein"
                     /calculated_mol_wt=59211
     Region          4..511
                     /region_name="COG3046"
                     /note="Uncharacterized conserved protein related to
                     deoxyribodipyrimidine photolyase [General function
                     prediction only]"
                     /db_xref="CDD:442280"
ORIGIN      
        1 mfpnqlfeeh laapvgtrfv liehellfrq yrfhshklvl hraslarfak rltghgfave
       61 ylesrkelps krqlaelirr eaprrvtwfd vvddwlerdl lgaleaggyt wsgddelesp
      121 nfltgraeid awfsgndarm hafyiwqrrr lgllldedge plggrwsfda enrkklprgy
      181 vppkvarfeg hpvlqregtf dldallgdep aagsaeprna dveeaiawvg sefpdapgdp
      241 ttfvwptdad eaqrhlaefv rerlrdfgpy edaissehpf lnhglltpal niglldprqv
      301 vqaaldaadt etalaslegf vrqvigwrey mratyqvrgr elrtsnaleh hgrlapgwwq
      361 gttglepvdl visrvletgy ahhierlmvl gnamsllrih pdevyrwfme lfvdaydwvm
      421 vpnvyamsqf aagadittkp yvsgsnylrk msdlpagdwt arwdalywaf vddhravfar
      481 nprtqmtval ldrmepekra ehlataaeil rpsaasadad r
//
LOCUS       WP_258063192             963 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: family 43 glycosylhydrolase [unclassified
            Rathayibacter].
ACCESSION   WP_258063192
VERSION     WP_258063192.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 963)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..963
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=101447
     Region          46..340
                     /region_name="GH43_FsAxh1-like"
                     /note="Glycosyl hydrolase family 43 such as Fibrobacter
                     succinogenes subsp. succinogenes S85 arabinoxylan
                     alpha-L-arabinofuranosidase; cd09001"
                     /db_xref="CDD:350115"
     Site            order(58,83,130..131,176..177,235,294..295,315,317,323)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:350115"
     Region          407..533
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; pfam02018"
                     /db_xref="CDD:396553"
     Region          571..787
                     /region_name="GH43_C2"
                     /note="Beta xylosidase C-terminal Concanavalin A-like
                     domain; pfam17851"
                     /db_xref="CDD:436093"
ORIGIN      
        1 mravastaig allaagllas gaapataaga wspkasytst drgdgtysvp llnadvpdvs
       61 vervpaaend egrdiyymis ttmhlspgap imksydlvnw eivnyvfdrl eigdrfslrn
      121 gqnsygngqw asslryhdgr yyavfntnnl ggsylystdd iedgawtrta lgrafhdpsl
      181 ffddadggtp yifygsgsts avklsedltt vvaeypnilr tsdypgagyl gglfegaqvq
      241 yidgqyyivi itwpsgqgrq valfrssell gryatadgsn pyegkgvlns sgfaqgslvp
      301 iakedgstaw hgmffrdsfp tgripglipa twkdgwptfg tngsvpvggs fpkpirlspe
      361 eelferqksi vvsddfdnda pakayqdesw tippapayda sllgvqllqn pgaesgtapw
      421 agqfgatlsa dttdpasgta alrvgtrtln gsgpsqvlan klqrgvtytv sakvkyttgp
      481 asvrfnlcad fgagpvtmas aavtqgqwtt itgtytvpet anvgsvkfav etpwgnpqpa
      541 sssteylldd vslvgaaptl erptaaeiep ngstlalpwq wnhapdnryw slteregwlr
      601 ltngkvlsgt aahtrlsgsp emtyleearn tlsqrivapk qsaeaafdvs gmkdgdvagl
      661 aaynrgfsyv avkrvdgvtt vgvvnrsqpf attfdqaave sflpgttaal gdasqvrlka
      721 dlelsapagq lwttfsysld gtswtklgsr vgpqtldgql thfmghrlgl fsyatktagg
      781 hvdvdeflls dtlssegkal drsqldaava haatlrsddy padawsdlqs vlakaqavgt
      841 agtqnqidap eralsyqlar lgtlkeasld vtaaaatrci agkvvvtvra tnaddvpval
      901 rmesasgtkt vaalapgatt shafttraas vpaaevvvta tatldgepvt ttvraphpaa
      961 scg
//
LOCUS       WP_258063223             258 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: glycerophosphodiester phosphodiesterase family
            protein [unclassified Rathayibacter].
ACCESSION   WP_258063223
VERSION     WP_258063223.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 258)
  AUTHORS   Kim,H. and Farrand,S.K.
  TITLE     Characterization of the acc operon from the nopaline-type Ti
            plasmid pTiC58, which encodes utilization of agrocinopines A and B
            and susceptibility to agrocin 84
  JOURNAL   J Bacteriol 179 (23), 7559-7572 (1997)
   PUBMED   9393724
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03009.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..258
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /GO_function="GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=27289
     Region          4..236
                     /region_name="PI-PLCc_GDPD_SF"
                     /note="Catalytic domain of phosphoinositide-specific
                     phospholipase C-like phosphodiesterases superfamily;
                     cl14615"
                     /db_xref="CDD:472694"
     Site            order(7,34,36,100,128,207)
                     /site_type="active"
                     /db_xref="CDD:176498"
     Site            order(7,49)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176498"
ORIGIN      
        1 mprviahrgf gppaegntla aferalaaga dlletdaras ldgvavlvhd aevidrsgrr
       61 hvvaatrwee ladlrlagga rlasleqala alprarfnid vksrdaidpv vaavsgaaaa
      121 ervlitsfse irraaalrrl pgaatsasav rfvvalvaah lgaalpvrla lrgidalqvp
      181 eralglrvae prilarlrvt gceihlwtid dpermeqlla lgidglvtdr tdlaraavda
      241 flsarqprpq eprntppt
//
LOCUS       WP_258063316             386 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [unclassified Rathayibacter].
ACCESSION   WP_258063316
VERSION     WP_258063316.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..386
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=37819
     Region          43..348
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(57,108..109,111..113,116,136,139..140,143,216,
                     219..220,223..225,228,257,261,310..311,315,319,335,
                     338..339,342..343,346)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mrnrlatpsl lahavliqav afllrpaavy qairldvpaw algalgasfa lvpllialpv
       61 gglvdrvgar avmavgslva vgaaavllla ggsvaglllg iallgaghlg cvvgqqtvva
      121 ggtggtrlds rfgyytfaas lgqaigpafi pvlaggsvrp dpaplflvgg ilavlllvst
      181 agirspsprg paaegaaapg stlgllrvpg laralltsat vvaavdltvv ylpalgaerg
      241 lpagvvgall tvralasmas rlllgaatar lgrtrvmvgg ilisalclvl valpaptvll
      301 fvavvalglg lgigqpitms wliertpadr hgralalrla gnrlglialp sllgvlaaaa
      361 gaggvligtg aavgatllll rgvrld
//
LOCUS       WP_258063359             318 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF998 domain-containing protein [unclassified
            Rathayibacter].
ACCESSION   WP_258063359
VERSION     WP_258063359.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017959.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06197.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..318
                     /product="DUF998 domain-containing protein"
                     /calculated_mol_wt=32836
     Region          3..212
                     /region_name="DUF998"
                     /note="Protein of unknown function (DUF998); cl21592"
                     /db_xref="CDD:473918"
     Region          <207..311
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mgtrgagvlw vvsalayvga eavaasafpg ysyarnyisd lgvpevgvfq graidsplha
       61 vmnagfllqg alylaaavtt vraarggsrg lflslavvha vgiavvglvh gssasaqngi
      121 gglhvvgaam aivggnaasi vagaaarrgr apwalgtvgi vlgavgllal lmlqvdtrvp
      181 gvdllpdgvw erasvyavta wqlatglrll rrpevprqpr ppqtagsgaq vrsavhrlfq
      241 lgiripeals vvvfddnpws elvtpplsvv rqpidmlarh svelvlarmq grlpeapqhi
      301 evqadlvirs scaappqr
//
LOCUS       WP_258062331             319 aa            linear   BCT 02-MAR-2025
DEFINITION  RecX family transcriptional regulator [Arthrobacter sp. B0490].
ACCESSION   WP_258062331
VERSION     WP_258062331.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. B0490
  ORGANISM  Arthrobacter sp. B0490
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 319)
  AUTHORS   Alekseev,A., Pobegalov,G., Morozova,N., Vedyaykin,A.,
            Cherevatenko,G., Yakimov,A., Baitin,D. and Khodorkovskii,M.
  TITLE     A new insight into RecA filament regulation by RecX from the
            analysis of conformation-specific interactions
  JOURNAL   Elife 11, e78409 (2022)
   PUBMED   35730924
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 319)
  AUTHORS   Cardenas,P.P., Carrasco,B., Defeu Soufo,C., Cesar,C.E., Herr,K.,
            Kaufenstein,M., Graumann,P.L. and Alonso,J.C.
  TITLE     RecX facilitates homologous recombination by modulating RecA
            activities
  JOURNAL   PLoS Genet 8 (12), e1003126 (2012)
   PUBMED   23284295
REFERENCE   3  (residues 1 to 319)
  AUTHORS   Ragone,S., Maman,J.D., Furnham,N. and Pellegrini,L.
  TITLE     Structural basis for inhibition of homologous recombination by the
            RecX protein
  JOURNAL   EMBO J 27 (16), 2259-2269 (2008)
   PUBMED   18650935
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014668.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02631.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Arthrobacter sp. B0490"
                     /db_xref="taxon:2058891"
     Protein         1..319
                     /product="RecX family transcriptional regulator"
                     /GO_process="GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /calculated_mol_wt=33520
     Region          <8..243
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          157..314
                     /region_name="RecX"
                     /note="SOS response regulatory protein OraA/RecX,
                     interacts with RecA [Posttranslational modification,
                     protein turnover, chaperones]; COG2137"
                     /db_xref="CDD:441740"
ORIGIN      
        1 mpsdsgtepv gwgtvsglfg sdssegaadp pgpatprrss fgrrgsapsa ssassfgars
       61 sagkrqartg grrdgarrsp fddpfgpvvg ssadaptada vvrdvgegpa qndaaprrtg
      121 rggtkrsgag rggdgttphp gatedpdvad ggagksdeew asearsvllr qlalgprsrh
      181 qldqklagrd vppaiassll drfeevqlid daefarmwvr trtaakslsr sslrreladk
      241 gidpdlaeda llqlsdedeh eqarevarrr lrssadlsdr avrekevrrl vgvlarkgys
      301 pgtafsivkd vvaderted
//
LOCUS       WP_258063437             419 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Staphylococcus pseudintermedius].
ACCESSION   WP_258063437
VERSION     WP_258063437.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus pseudintermedius
  ORGANISM  Staphylococcus pseudintermedius
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus intermedius
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Staphylococcus pseudintermedius"
                     /db_xref="taxon:283734"
     Protein         1..419
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45441
     Region          14..395
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(20..21,24..25,28,65,115..116,118..120,123,142,
                     145..146,149,226,229..230,233..235,238,269,273,322..323,
                     327,331,347,350..351,354..355,358)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mieqtwrrnf rtlwlgqfma iagltvlvpl lpiyiaslkq lnifeiqlws giaiaapait
       61 tmlasplwgk lgdrlsrkwm vlralfglgl clllmafctt pfqfvlvrll qglfggvvea
      121 ssafasgeap esergsvlgk lqsavsagsl vgpliggvla tvlgfqallf siglitllms
      181 ilgvffliet ththanterp qvkksvrqsm kcllctqltc rfiivgvlan famygmmtal
      241 aplvssvnhv hiddraavgi lqlafwtasm msapfwgyfn dkayvknvyi iasilcgisv
      301 lwqgvatdlw mlgiarvlqg ltysaliqsv mfvvvnashh qlkgtfvgst nsflvvgqiv
      361 gslsgaivts ytapamtfil mgvifalsst llwtshiknq kinpiltgfw evkeqrakl
//
LOCUS       WP_258063390             414 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3027 domain-containing protein [Rathayibacter sp. AY1A5].
ACCESSION   WP_258063390
VERSION     WP_258063390.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1A5
  ORGANISM  Rathayibacter sp. AY1A5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022674.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11228.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Rathayibacter sp. AY1A5"
                     /db_xref="taxon:2080523"
     Protein         1..414
                     /product="DUF3027 domain-containing protein"
                     /calculated_mol_wt=42582
     Region          <12..172
                     /region_name="LGT"
                     /note="Prolipoprotein diacylglyceryl transferase; cl00478"
                     /db_xref="CDD:469786"
     Region          241..>309
                     /region_name="DUF3027"
                     /note="Protein of unknown function (DUF3027); pfam11228"
                     /db_xref="CDD:431743"
ORIGIN      
        1 mpdadgttde qgpveetvaa ptpedarveq ssgesdsgae pdatpadsds saedargade
       61 etdadqaapv deapsgeges daalpvteas gedsasaeet ppaddvaaea gvfgsgtasa
      121 avpapaenaa tadnstpadd agtpedsapa qdlapaddsa paedatsaed salvmdepse
      181 adgapaadat sadddastge adeaaadeap epvyeadavl arsldvaraa laeiapegti
      241 gelvttlaqg ehvvslqfan lmrgypgwlw tatlsridet edvnvlevel lpgegavlap
      301 dwvpwsvrla dyqtaqdalg eevedaddde ledaeeddld desdddsded agddddsddd
      361 ddseddsddh dsddedsded dsddpdddpd dedsddvepe papapttrrr rrrr
//
LOCUS       WP_258063439             255 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerophosphodiester phosphodiesterase family protein
            [Rathayibacter sp. AY1A5].
ACCESSION   WP_258063439
VERSION     WP_258063439.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1A5
  ORGANISM  Rathayibacter sp. AY1A5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 255)
  AUTHORS   Kim,H. and Farrand,S.K.
  TITLE     Characterization of the acc operon from the nopaline-type Ti
            plasmid pTiC58, which encodes utilization of agrocinopines A and B
            and susceptibility to agrocin 84
  JOURNAL   J Bacteriol 179 (23), 7559-7572 (1997)
   PUBMED   9393724
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03009.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Rathayibacter sp. AY1A5"
                     /db_xref="taxon:2080523"
     Protein         1..255
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /GO_function="GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=26920
     Region          1..233
                     /region_name="PI-PLCc_GDPD_SF"
                     /note="Catalytic domain of phosphoinositide-specific
                     phospholipase C-like phosphodiesterases superfamily;
                     cl14615"
                     /db_xref="CDD:472694"
     Site            order(4,31,33,97,125,204)
                     /site_type="active"
                     /db_xref="CDD:176498"
     Site            order(4,46)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176498"
ORIGIN      
        1 miahrgfgpq aegntlaafe ralaagadll etdarasldg vavlvhdaev vdrsgrrhvv
       61 aatrweelad lrlaggarla sleqalaalp rarfnvdvks rdaidpvvaa vsgaaaaerv
      121 litsfseirr aaalrrlpga atsasavrfv valvaahlga alpvrlalrg idalqvpera
      181 lglrvaepri larlrvtgce ihlwtiddpe rmeqllalgi dglvtdrtdl araavdavls
      241 arrprpqepr ntppt
//
LOCUS       WP_258063445             514 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rathayibacter sp. AY1A5].
ACCESSION   WP_258063445
VERSION     WP_258063445.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1A5
  ORGANISM  Rathayibacter sp. AY1A5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Rathayibacter sp. AY1A5"
                     /db_xref="taxon:2080523"
     Protein         1..514
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=51615
     Region          23..470
                     /region_name="PRK14995"
                     /note="SmvA family efflux MFS transporter"
                     /db_xref="CDD:184957"
ORIGIN      
        1 msartapvst hdtagaadrv grrawvalav lmlpvllvsv dntvlnfalp siaedlgpsg
       61 tellwivday plvlagllva mgslgdrvgr rrlllvgavg faavsvvaaf aptaaaliga
      121 raalgffgam lmpstlsllr svfpdrdqrr laiaiwatgf avgsgvgplv ggvllehfpw
      181 gsvfllavpv llplvvlvpi lvpesrdpqp gpvdvvsill slatmapvvy avksfaehgi
      241 davgvaalvv gvvsgvlfvr rqqrrtspml dlslfrrgsf saaivvnlls vtalvgglff
      301 lsqhlqlvvg lspleaglvl vpglavmila glgvvpiarr vapclvvpag llvsavgyil
      361 lalgsgapgg asaltvavaf aflglgigaa etvsnelila napadkagaa savsetayel
      421 gavlgtatlg tvltavyrgg vvlpegldaa qaqragetlg gavsvagelp adsaaslvas
      481 asaafdsgvg wsawlgvvlv laaaavgawr lrrs
//
LOCUS       WP_258063592             900 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Rathayibacter sp. AY1C4].
ACCESSION   WP_258063592
VERSION     WP_258063592.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1C4
  ORGANISM  Rathayibacter sp. AY1C4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 900)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Rathayibacter sp. AY1C4"
                     /db_xref="taxon:2080537"
     Protein         1..900
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=92858
     Region          66..324
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     Region          351..894
                     /region_name="PRK09274"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:236443"
ORIGIN      
        1 mtaphpaeri rgalgstaaa qlppagldgl dpawsrlvda pdaqgvprrw hlldtgealg
       61 tepvgtvlcv hgnptwsylw rrlaaatles arsggpawrv vavdqlemgf sertgalhtl
      121 adrvrelsnl tdvlglddvv tlghdwggvv slgwavdhpe qlratmllnt aihqsadepi
      181 paplrlalas gvlgastvgt paflettlal ghpalpsavk egyrapyrsa srrggvggfv
      241 adipvdsahp sdpelqriae gvsalttpal mlwgpldpif sdrylddlvd rlphaqvhry
      301 egaghlvaed vdyssavltw lgdlsdgeep fggdpapdvr rptapveplw ahldrnaqdd
      361 slalvemapp ggggprsvsw rllsqrvrel aaglrasgvs pgdrvsllvp pgadltally
      421 aclrigavvv vadaglglrg ltravrgawp dlvvgalpgl avaralrwpg grvstqtlpr
      481 asasalgvdt slgqlielgr aelaadpeal geapaadava ailftsgstg pakgvvythr
      541 qlagvrdala rqygigpgtg lvagfapfal lgpalgtrsa tpdmdvtapr tltaaavaaa
      601 aarvdatvlf lspaalanvv atagaldadd hralagvrtf lsagapvsag llgeaqalmp
      661 nasartpygm tegllltdas legireaaad ddprggvcvg vpaagvrlri apldadgraa
      721 depeeitgtt geivvsaghv edhyerlwlt draarvgavp gerwhrtgdv gridsagrlw
      781 vegrmphvvv tpdgvvtpvg peqriearva svaraaivga gprgvaqlvt vvelrsgarr
      841 vvlaeealaa evraavdrpv aavlvvpalp tdirhnskid raalsrwaeg vlaggpmvap
//
LOCUS       WP_258063606             258 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerophosphodiester phosphodiesterase family protein
            [Rathayibacter sp. AY1C4].
ACCESSION   WP_258063606
VERSION     WP_258063606.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1C4
  ORGANISM  Rathayibacter sp. AY1C4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 258)
  AUTHORS   Kim,H. and Farrand,S.K.
  TITLE     Characterization of the acc operon from the nopaline-type Ti
            plasmid pTiC58, which encodes utilization of agrocinopines A and B
            and susceptibility to agrocin 84
  JOURNAL   J Bacteriol 179 (23), 7559-7572 (1997)
   PUBMED   9393724
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03009.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Rathayibacter sp. AY1C4"
                     /db_xref="taxon:2080537"
     Protein         1..258
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /GO_function="GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=27356
     Region          4..236
                     /region_name="PI-PLCc_GDPD_SF"
                     /note="Catalytic domain of phosphoinositide-specific
                     phospholipase C-like phosphodiesterases superfamily;
                     cl14615"
                     /db_xref="CDD:472694"
     Site            order(7,34,36,100,128,207)
                     /site_type="active"
                     /db_xref="CDD:176498"
     Site            order(7,49)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176498"
ORIGIN      
        1 mprviahrgf gppaegntla aferalaaga dlletdaras ldgvavlvhd aevidrsgrr
       61 hvvaatrwee ladlrlagga rlasleqala alprarfnid vksrdaidpv vaavsgaaaa
      121 ervlitsfse irraaalrrl pgaatsasav rfvvalfaah lgaalpvrla lrgidalqvp
      181 eralglrvae prilarlrvt gceihlwtid dpermeqlla lgmdglvtdr tdlaraavda
      241 flsarqprpq eprntppt
//
LOCUS       WP_258063624             258 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Rathayibacter sp.
            AY1C4].
ACCESSION   WP_258063624
VERSION     WP_258063624.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1C4
  ORGANISM  Rathayibacter sp. AY1C4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 258)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 258)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Rathayibacter sp. AY1C4"
                     /db_xref="taxon:2080537"
     Protein         1..258
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=26761
     Region          5..249
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(9,11..12,14,33..35,80..82,136..138,151,155,181..184)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187604"
     Site            order(105,138,151,155)
                     /site_type="active"
                     /db_xref="CDD:187604"
ORIGIN      
        1 mdrrvvvtga ssgigaatvr lfcehgwevv avarrrdrle alaaetgagy faadltdaaq
       61 vdalrdhlas sgpvhalvnn aggalgldsv ersdpedwrr mfeinvlsvk lvtsallpll
      121 ragirgsgts adivtvtsia ghvayegggg ynaakhaaha lvavlrlela gepirvieia
      181 pgmvhtdefs lvrfggdrer adavyaevpd plvaedvaaa ivssvelpah vnldlvtikp
      241 vaqaaphkva kgplapra
//
LOCUS       WP_258063676             299 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4097 family beta strand repeat-containing protein [Rathayibacter
            sp. AY1C4].
ACCESSION   WP_258063676
VERSION     WP_258063676.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1C4
  ORGANISM  Rathayibacter sp. AY1C4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024743.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13349.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Rathayibacter sp. AY1C4"
                     /db_xref="taxon:2080537"
     Protein         1..299
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /calculated_mol_wt=31203
     Region          <101..261
                     /region_name="YvlB"
                     /note="Uncharacterized conserved protein YvlB, contains
                     DUF4097 and DUF4098 domains [Function unknown]; COG3595"
                     /db_xref="CDD:442814"
ORIGIN      
        1 mslekwlvqa getkvidldv vrsvkvalvg gqidviahde ptarvevhsv dgrplkvsmd
       61 gdrleidhvq lrwdtivdvv kglgrrgdra disllvprgv dlkfdtvsad glvsglhsda
      121 rvstvggdiv vdglhgdiev ntvhgelsvr shtgrvtart vsgdvtatge ltrftvdgvs
      181 gsvfvdaegt pdriqantvs gdltirvdeg lgtryrintv sgtlqldgsv vkgtfgrgft
      241 sttgsldskw vdvaansvsg dvvvvrrsva assasvgegw gspgtgpadd rrpmdgssl
//
LOCUS       WP_258063407             244 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: VIT1/CCC1 transporter family protein [unclassified
            Rathayibacter].
ACCESSION   WP_258063407
VERSION     WP_258063407.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 244)
  AUTHORS   Fu,D., Beeler,T. and Dunn,T.
  TITLE     Sequence, mapping and disruption of CCC1, a gene that
            cross-complements the Ca(2+)-sensitive phenotype of csg1 mutants
  JOURNAL   Yeast 10 (4), 515-521 (1994)
   PUBMED   7941738
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014090.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01988.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..244
                     /product="VIT1/CCC1 transporter family protein"
                     /GO_function="GO:0005384 - manganese ion transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0030026 - intracellular manganese ion
                     homeostasis [Evidence IEA]"
                     /calculated_mol_wt=24545
     Region          24..238
                     /region_name="CCC1_like"
                     /note="CCC1-related family of proteins; cl00278"
                     /db_xref="CDD:469703"
ORIGIN      
        1 mstpftpqps spraephdsa isgrlnwlra gvlgandgiv svaalvvgva gattatapil
       61 tagvagvvgg aismalgeyv svssqsdsqr aliakervel aedpdgelee lawlyrargl
      121 tpetahqvar eltendalta hleaelglne eavasplaaa gasalafllg avlpllaill
      181 pppdwrvpvt favvlialaa tgyisarvgg spalrpmiri vvggalalaa tfliglllgt
      241 sgav
//
LOCUS       WP_258063684             307 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: NAD(P)-dependent oxidoreductase [unclassified
            Rathayibacter].
ACCESSION   WP_258063684
VERSION     WP_258063684.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Dengler,U., Niefind,K., Kiess,M. and Schomburg,D.
  TITLE     Crystal structure of a ternary complex of D-2-hydroxyisocaproate
            dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate
            at 1.9 A resolution
  JOURNAL   J Mol Biol 267 (3), 640-660 (1997)
   PUBMED   9126843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02826.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..307
                     /product="NAD(P)-dependent oxidoreductase"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
                     /calculated_mol_wt=31737
     Region          6..307
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(136..138,140,158..160,190..191,218)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:240631"
ORIGIN      
        1 mtvprvavlp rqkpvfaeav esgggvvvgl despdallwl sygrtdelaa vleehpsirw
       61 vqlpwagvdv fapvlaasra dvvwtsakga yaepvaehal alvlallrsl peraravswg
      121 pkkavtlhra svvivgaggi arellrllav fdcrvtivrr gdepvegaar tlpasrlaea
      181 aadadvlvla aaatagterm vdagllarlp ahavlvnvar gslvdtdalv aalaegrlag
      241 aaldvtdpep lpdghplwse prclitphsa dtpeitapll aervranvaa caaggpfvgr
      301 vdpgsgy
//
LOCUS       WP_258063688             215 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: response regulator [unclassified Rathayibacter].
ACCESSION   WP_258063688
VERSION     WP_258063688.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 215)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..215
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=22655
     Region          1..199
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mtettprrvl lvedqqmirr glvmllstve gvvvsaqaen gqaalhilrt tevdvvvtda
       61 rmpvmggvel aaecaqlhpr lpvlllttfd ddalvqaals agasgfllkd tsveglvval
      121 daviaggmvi dprvarpavq pgrtgesplt lltrservva elvaegrnnr eiaaalvlae
      181 gtvknhvsal lrklglrdrt alaltlykgf rpdga
//
LOCUS       WP_258063711            1628 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3320 domain-containing protein [Rathayibacter sp. AY1C4].
ACCESSION   WP_258063711
VERSION     WP_258063711.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1C4
  ORGANISM  Rathayibacter sp. AY1C4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023212.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11784.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Rathayibacter sp. AY1C4"
                     /db_xref="taxon:2080537"
     Protein         1..1628
                     /product="DUF3320 domain-containing protein"
                     /calculated_mol_wt=177648
     Region          40..206
                     /region_name="DUF4011"
                     /note="Protein of unknown function (DUF4011); pfam13195"
                     /db_xref="CDD:463806"
     Region          <223..>364
                     /region_name="McrB"
                     /note="5-methylcytosine-specific restriction endonuclease
                     McrBC, GTP-binding regulatory subunit McrB [Defense
                     mechanisms]; COG1401"
                     /db_xref="CDD:441011"
     Region          317..>376
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            339..345
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          388..1249
                     /region_name="DNA2"
                     /note="Superfamily I DNA and/or RNA helicase [Replication,
                     recombination and repair]; COG1112"
                     /db_xref="CDD:440729"
     Region          1269..1365
                     /region_name="MTES_1575"
                     /note="REase_MTES_1575; pfam18741"
                     /db_xref="CDD:465853"
     Region          1465..1513
                     /region_name="DUF3320"
                     /note="Protein of unknown function (DUF3320); pfam11784"
                     /db_xref="CDD:432073"
ORIGIN      
        1 mieytpqake hvfdftgagt grrrevdtgp arvtawknal ldlslrnrli nytdragfsl
       61 avpgadlahf edvinrstai qlvasdaisd lairqgmqsg kdlpteirte mlfdkkqvfv
      121 nvteaaytdk lrkfaasakt iveetgannl ylafgtlhwt lddrelrspm vlvpvtiket
      181 argsvftitl desgsstpnf clveklkvsv gldlpglaap aedesgidlr avfdsvratl
      241 terglpfrve etvdlavlqf akfrlwrdld eqwevlarnp lvshlintpl eafedpagee
      301 ldldldelsa qvpvpadasq leavaaavag ktfvlegppg tgksqtitnl larslaegkr
      361 vlfvaekraa ldvvkrrlee vglgpfcldl hdkgarpaea raqiraaldf svqpdshgfa
      421 iqqdtvestt rklrryadhv heengagysl yeahqrevla eehiqaldvp rrfvengtle
      481 qfdsirralr llpddfhaar prpghpwsfv spsrlapgla gevadaadel davlleldrl
      541 dfpapalaaa sdpallepai raseaderpl atldlfieqg wdahlahaqe elrrlaplrf
      601 dvldviherv idadlddira aavaadgagl larkklrrsv rdrlapylrs gpesvpldgl
      661 validrvlla rqhalylrel vrqvpaptap erwnafeget lrrisaeigv lrtlrrlvvv
      721 geeangavdr dliravyarp dravlgaslq rfidahrsll qvagapseel sdwaggrpvv
      781 eawrqsater gsgrvavrsl etwlaflerl eplreagmst arrqyleggg dvddallafe
      841 kglaassvde rlastelggf qtaaherllg ryttsasavr nelpriipsq vlarrdlssl
      901 pptmmgglkr qlenksrggf kvrrlmndfg plitrlapct lmspesvarf lpvdadlydi
      961 vvfdeasqvr vadavgalgr arsavivgds kqmpptsfae tgavedetlp adtvvdeesi
     1021 lseasqarvp srwlswhyrs qderliafsn sryydsrlss fptphaddag daqegygisf
     1081 vrvagtfirt grgkalrtna aeaeaivaev hrrfdaspdv vpslgiitfn aqqrdlidgl
     1141 lrsssdpria rsldvtdglf vknlenvqgd erdtilfsia fsanekgvvp lqfgpltrag
     1201 gerrwnvait rarrqvvlfc sfdpaelrad dtqsvgvkhl kaylqlaqag sggvndaldr
     1261 lphpdahrde laaalieagl aaridvglse frvdialata eqpgrplvav lldgaswrrr
     1321 rtvsdrdglp gavlknamgw pavervwlpe wladrdavie rlrdavrrad dvvrdaqast
     1381 pevelpeaep saptppqpev vdlvadapel arsfhvvagt frsrsepvsv paaperpgan
     1441 gqggittyta wrervvgskd vlnalpaess rraiaelvse vveaegplhe traakliaga
     1501 felnkvstar vdsivdcfpe hfrrladpgf lwpaglgpdd ydgartgvyl gvdrvyehid
     1561 pfeaanavsq cvratpgidh yalvratmts lgilrmtdni rglvaqsidd avrqgkvvlg
     1621 asggywvs
//
LOCUS       WP_258063776             521 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: cryptochrome/photolyase family protein [unclassified
            Pseudoclavibacter].
ACCESSION   WP_258063776
VERSION     WP_258063776.1
KEYWORDS    RefSeq.
SOURCE      unclassified Pseudoclavibacter
  ORGANISM  unclassified Pseudoclavibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016158.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04244.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="unclassified Pseudoclavibacter"
                     /db_xref="taxon:2615177"
     Protein         1..521
                     /product="cryptochrome/photolyase family protein"
                     /calculated_mol_wt=59182
     Region          4..511
                     /region_name="COG3046"
                     /note="Uncharacterized conserved protein related to
                     deoxyribodipyrimidine photolyase [General function
                     prediction only]"
                     /db_xref="CDD:442280"
ORIGIN      
        1 mfpnqlfeeh laapvgtrfv liehellfrq yrfhshklvl hraslarfak rltghgfave
       61 ylesskelps krqlaelirr eaprrvtwfd vvddwlerdl lgaleaggyt wsgddelesp
      121 nfltgraeid twfsgndarm hafyiwqrrr lgllldedge plggrwsfda enrkklprgy
      181 vppkvarfeg hpvlqregtf dldallgdep aagsaeprna dveeaiawvg sefpdapgdp
      241 ttfvwptdad eaqrhlaefv rerlrdfgpy edaissehpf lnhglltpal niglldprqv
      301 vqaaldaadt etplaslegf vrqvigwrey mratyqvrgr elrtsnaleh hgrlapgwwq
      361 gttglepvdl visrvletgy ahhierlmvl gnamsllrih pdevyrwfme lfvdaydwvm
      421 vpnvyamsqf aagadittkp yvsgsnylrk msdlpagdwt arwdalywaf vddhravfar
      481 nprtqmtval ldrmepekra ehlataaeil rpsaaaadad r
//
LOCUS       WP_258063824             514 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [unclassified Rathayibacter].
ACCESSION   WP_258063824
VERSION     WP_258063824.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..514
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=51668
     Region          23..470
                     /region_name="PRK14995"
                     /note="SmvA family efflux MFS transporter"
                     /db_xref="CDD:184957"
ORIGIN      
        1 msartapvst hdtagaadrv grrawvalav lmlpvllvsv dntvlnfalp siaedlgpsg
       61 tellwivday plvlagllva mgslgdrvgr rrlllvgavg faavsvvaaf aptaaaliga
      121 raalgffgam lmpstlsllr svfpdrdqrr laiaiwatgf avgsgtgplv ggvllehfpw
      181 gsvfllavpv llplvvlvpi lvpesrdpqp gpvdvvsill slatmapvvy avksfaehgi
      241 davgvaalvv gvvsgvlfvr rqqrraspml dlslfrrgsf saaivvnlls vtalvgglff
      301 lsqhlqlvvg lspleaglvl vpglavmila glgvvpiarr vaprlvvpag llvsavgyil
      361 lalgsgapgg asaltvavaf aflglgigaa etvsnelila napadkagaa savsetayel
      421 gavlgtatlg tvltavyrgg vvlpegldav qaqragetlg gavsvagelp adsaaslvas
      481 asaafdsgvg wsawlgvvlv laaaavgawr lrrs
//
LOCUS       WP_258063872             461 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ABC transporter substrate-binding protein
            [unclassified Rathayibacter].
ACCESSION   WP_258063872
VERSION     WP_258063872.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..461
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=49296
     Region          2..443
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mpdlaasaef tdpthyrval redaafangn pltasdvvft ferqvaiaap ngpssllsdm
       61 vsveaeddst vvftlatpdn alwpqiltsp aaaivdedvf sadslttddd ivagdafsgq
      121 ysitsyklns lvqltrndsy dgllgaaane svivryyade snlkldiqrg eiavayrtln
      181 atdtedlrge egltvhsgpg aemrflvfnp etmpygsats eadadkalav rtavadlidr
      241 delsdqvykg tyapvysivp saltgstpay eqafgdgsgg psadeaaaal qaagitgpvd
      301 lklqyntdhy gsstsdeyal iknqlersgl ftvdlqstew tqyvkeksts yplyqqgwfa
      361 dypdsdnyln llygtdevps ilgaavkdda ynevvlrers lapgdertaa ieeaqrlaae
      421 kaitvplleg tetviassti sgiddtldgs grfrfgllrs e
//
LOCUS       WP_258063876             603 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: alkaline phosphatase family protein [unclassified
            Rathayibacter].
ACCESSION   WP_258063876
VERSION     WP_258063876.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 603)
  AUTHORS   Jin-Hua,P., Goding,J.W., Nakamura,H. and Sano,K.
  TITLE     Molecular cloning and chromosomal localization of PD-Ibeta (PDNP3),
            a new member of the human phosphodiesterase I genes
  JOURNAL   Genomics 45 (2), 412-415 (1997)
   PUBMED   9344668
REFERENCE   2  (residues 1 to 603)
  AUTHORS   Peiffer,W.E., Desrosiers,M.G. and Menick,D.R.
  TITLE     Cloning and expression of the unique Ca2+-ATPase from
            Flavobacterium odoratum
  JOURNAL   J Biol Chem 271 (9), 5095-5100 (1996)
   PUBMED   8617788
REFERENCE   3  (residues 1 to 603)
  AUTHORS   Deissler,H., Lottspeich,F. and Rajewsky,M.F.
  TITLE     Affinity purification and cDNA cloning of rat neural
            differentiation and tumor cell surface antigen gp130RB13-6 reveals
            relationship to human and murine PC-1
  JOURNAL   J Biol Chem 270 (17), 9849-9855 (1995)
   PUBMED   7730366
REFERENCE   4  (residues 1 to 603)
  AUTHORS   Murata,J., Lee,H.Y., Clair,T., Krutzsch,H.C., Arestad,A.A.,
            Sobel,M.E., Liotta,L.A. and Stracke,M.L.
  TITLE     cDNA cloning of the human tumor motility-stimulating protein,
            autotaxin, reveals a homology with phosphodiesterases
  JOURNAL   J Biol Chem 269 (48), 30479-30484 (1994)
   PUBMED   7982964
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01663.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..603
                     /product="alkaline phosphatase family protein"
                     /calculated_mol_wt=61322
     Region          39..>242
                     /region_name="AtaC"
                     /note="c-di-AMP phosphodiesterase AtaC or nucleotide
                     pyrophosphatase, AlkP superfamily [Signal transduction
                     mechanisms]; COG1524"
                     /db_xref="CDD:441133"
     Region          <206..290
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
ORIGIN      
        1 mslfsrtlga vcatavvgga llaapsaasa agtaynglps gtqtaktlvv gidgasfdqf
       61 daadmpnldg lradgltats nlyaapmsgt vsgpgwstia tgvwpdkhnv vdnnftapkf
      121 aqypdylsri eaadsarssl vvatwspvaq tifgpsvdvr stgggdvqtt stavdylrng
      181 npdntfvhld evdgaghsvg tngaayatal iradaqlgel vaavkarpsy aseqwtilvt
      241 adhghtptgg hggntlaerk tfviaagpgi pagskrndvk ivdisatvla angiakdprw
      301 nldgsalsal kpdefdtlrg vlqpkvdetr paagllgwth stpagwsidn sampaggvte
      361 wagwsfatds fftsvepgqk retnvrsrdv favadsdewd dkahaagqfd stlispaypl
      421 tgaatatlty atdyvidgpq taavsvsfdg aapvavksyt antnanesve iavpagaqsa
      481 qfrfrytgqn safwtldqva laqaevpaln vtataatkcv agkalvtvqa lngngfpvam
      541 tatsafgsks fpsvaagksa shafstrtas ipagavsvta satvdgapat vtvsapyaat
      601 scn
//
LOCUS       WP_258063885             631 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: alanine racemase [unclassified Pseudoclavibacter].
ACCESSION   WP_258063885
VERSION     WP_258063885.1
KEYWORDS    RefSeq.
SOURCE      unclassified Pseudoclavibacter
  ORGANISM  unclassified Pseudoclavibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
REFERENCE   1  (residues 1 to 631)
  AUTHORS   Shaw,J.P., Petsko,G.A. and Ringe,D.
  TITLE     Determination of the structure of alanine racemase from Bacillus
            stearothermophilus at 1.9-A resolution
  JOURNAL   Biochemistry 36 (6), 1329-1342 (1997)
   PUBMED   9063881
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013345.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01168.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="unclassified Pseudoclavibacter"
                     /db_xref="taxon:2615177"
     Protein         1..631
                     /product="alanine racemase"
                     /EC_number="5.1.1.1"
                     /calculated_mol_wt=66381
     Region          1..>250
                     /region_name="Alr"
                     /note="Alanine racemase [Cell wall/membrane/envelope
                     biogenesis]; COG0787"
                     /db_xref="CDD:440550"
     Region          <338..355
                     /region_name="Ala_racemase_C"
                     /note="Alanine racemase, C-terminal domain; pfam00842"
                     /db_xref="CDD:459960"
     Region          495..618
                     /region_name="Ala_racemase_C"
                     /note="Alanine racemase, C-terminal domain; pfam00842"
                     /db_xref="CDD:459960"
ORIGIN      
        1 msgarvdvdl davranvrai adltrtplla vvkanayghg apevaraale ggavrlgvvd
       61 lrealalrea gitapllawm hgartdwlaa ldaeielgvs slaqlelvdi glgrlehser
      121 cvvvhlkldt glgrngispa ewesaftkaa elegrglirl eglfshlaga gpdadreqla
      181 sferalelaa rrgltpsvrh laatagsmsl pearfdlvrl gvslyglspf sadtdcpval
      241 rpalslsapi fedqrgfrvd lghaaglppi epgsleladd tgarwnvval dtlelrvepl
      301 egtvsasarl drsdepprll vidaarsasa dawasaagti nyevvtrlss riprrssgas
      361 spvephrvaa vapdesaala laprrelwvd vdllqarmge rardlaaalg ngmgarhaar
      421 lfsvdvsvda yglggalvag lalehgllpl vaanadlahv gqaarsstlv dhertrdpgs
      481 rgiygfdeps aplpvaltte lvhvkrvtag hgvsygydwv aeesttlglv plgyadaipr
      541 rvaghgevvv ggqrrpivgr vamdqvvidl qdqeawigmp vsvfgpetgd ihlqewasws
      601 avspqafvaa lgprvvrrer rdqggadgcg h
//
LOCUS       WP_258063902             423 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: acyl-CoA dehydrogenase family protein [unclassified
            Rathayibacter].
ACCESSION   WP_258063902
VERSION     WP_258063902.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 423)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 423)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02771.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..423
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=45516
     Region          39..417
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(115,145,147,171,173,400..402,404,406)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mtitaptttg adaattigaa aehwstaprp dspdawlvra eevaavlatd alerdragaa
       61 pfaevallka aglvtllgpa ehgggaqewt talrvvrtva rgdgsigqll gyhylwawaa
      121 rlvgtpeqii aveqlategd llyggavnpr dsdltvreeg delvftgrks fstggvvsdl
      181 tvlegvlegt dthlfaivpt dqegivfgrd wdslgqrlte sgsveirgvr vpwaaaagfv
      241 dkvyrplvyn tlnvpviqqv faefylgiaq galeraaqyt rertrawpyg gddkeragde
      301 wyvlegygdl qsrlwadeal idatgaalsa alhapreelt prrrgeiavr iaaakarive
      361 dglatatrvf eltgarasas svgldlywrn lrthslhdpl pykrrevgvf alldtvpeps
      421 wyt
//
LOCUS       WP_258063924             429 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [unclassified Pseudoclavibacter].
ACCESSION   WP_258063924
VERSION     WP_258063924.1
KEYWORDS    RefSeq.
SOURCE      unclassified Pseudoclavibacter
  ORGANISM  unclassified Pseudoclavibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="unclassified Pseudoclavibacter"
                     /db_xref="taxon:2615177"
     Protein         1..429
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=43951
     Region          27..418
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(33..34,37..38,41,73,123..124,126..128,131,151,
                     154..155,158,234,251..252,255..257,260,287,291,346..347,
                     351,355,371,374..375,378..379,382)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mpaspspssh gkpkkeatla qvtllallps fvfaigegai ipiiptvavs lgagielagf
       61 iagslmigqm igdlpagavv qrlgekraml aalgvsllgi llcafavapw mllvgvviig
      121 isaanfnlar haflttyvpl ryrarvlstl ggvfragffv gpfiiagilv lfdapqygfw
      181 vfvvcgavaa lillfapdpe tvarpshsak apvsagdgga gagvperlgv fatiranagv
      241 lvrlgtgagi maalraarnv mlplwalsig mdtatavlvi gvsagvdfal ffvsgwvmdr
      301 fgrvwgavpa llglgagflt lafthdlvgd aaqqwftvla iwlgfangig sgilmtlgad
      361 laprqdpapf lgawrlitds saasvpviva vatavvsisf tsgmlgvlgf vgaalmgwqi
      421 pkhvprqrr
//
LOCUS       WP_258063951             307 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: NAD(P)-dependent oxidoreductase [unclassified
            Rathayibacter].
ACCESSION   WP_258063951
VERSION     WP_258063951.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Dengler,U., Niefind,K., Kiess,M. and Schomburg,D.
  TITLE     Crystal structure of a ternary complex of D-2-hydroxyisocaproate
            dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate
            at 1.9 A resolution
  JOURNAL   J Mol Biol 267 (3), 640-660 (1997)
   PUBMED   9126843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02826.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..307
                     /product="NAD(P)-dependent oxidoreductase"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
                     /calculated_mol_wt=31586
     Region          6..307
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(136..138,140,158..160,190..191,218)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:240631"
ORIGIN      
        1 mtvprvavlp rpkpvfaeav esgggvvvgl dgspdallwl sygrtdelaa vleehpsihw
       61 vqlpwagvdv fapvlaasra dvvwtsakga yaepvaehal alvlallrsl peraraaswg
      121 pkkavtlhra svvivgaggi arellrllav fdcrvtivrr gdepvegaar tlpasrlaea
      181 aadadvlvla aaatagterm vdagllarlp ahavlvnvar gslvdtdalv aalaegrlag
      241 aaldvtdpep lpdghplwse prclitphsa dtpeitapll aervranvaa caaggpfvgr
      301 vdpgsgy
//
LOCUS       WP_258063950             289 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ATP-binding cassette domain-containing protein
            [unclassified Rathayibacter].
ACCESSION   WP_258063950
VERSION     WP_258063950.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 289)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 289)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 289)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 289)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..289
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=31081
     Region          <2..269
                     /region_name="GsiA"
                     /note="ABC-type glutathione transport system ATPase
                     component, contains duplicated ATPase domain
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1123"
                     /db_xref="CDD:440740"
ORIGIN      
        1 msrtaedqap ivvddlsvey pprgisrrwt alrgvslrve pgevlgilgg sgsgkstlar
       61 vlggdglghd ggrtrpviig gdatvaghrl rslparelkr ftvdvahlaq dagatlrpel
      121 tvseliaepi flrdrhydpk aaavrvatll dsvhlplfll drypyelssg qrqrvavars
      181 lvlgpkvlia deptsgidat vresivdlla dlrrregfaa vvvshdidvl sratdriavl
      241 vggevvaygp llevliearh pyvrelgaaf aeyerfdasr aqrveaadq
//
LOCUS       WP_258063972              37 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: sugar phosphate nucleotidyltransferase, partial
            [unclassified Rathayibacter].
ACCESSION   WP_258063972
VERSION     WP_258063972.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 37)
  AUTHORS   Jensen,S.O. and Reeves,P.R.
  TITLE     Domain organisation in phosphomannose isomerases (types I and II)
  JOURNAL   Biochim Biophys Acta 1382 (1), 5-7 (1998)
   PUBMED   9507048
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012695.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00483.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..37
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..>37
                     /product="sugar phosphate nucleotidyltransferase"
                     /GO_function="GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          1..>37
                     /region_name="RmlA1"
                     /note="dTDP-glucose pyrophosphorylase [Cell
                     wall/membrane/envelope biogenesis]; COG1209"
                     /db_xref="CDD:440822"
ORIGIN      
        1 mrgiilaggs gsrlwpitkg iskqlmpiyd kpmiyyp
//
LOCUS       WP_258064084             461 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Rathayibacter sp.
            AY1E8].
ACCESSION   WP_258064084
VERSION     WP_258064084.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1E8
  ORGANISM  Rathayibacter sp. AY1E8
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Rathayibacter sp. AY1E8"
                     /db_xref="taxon:2080555"
     Protein         1..461
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=49238
     Region          2..443
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mpdlaasaef tdpthyrval redaafangn pltasdvvft ferqvaiaap ngpssllsdm
       61 vsveaeddst vvstlatpdn alwpqiltsp aaaivdedvf sadslttddd ivagdafsgq
      121 ysitsyklns lvqltrndsy dgllgaaane svivryyade snlkldiqrg eiavayrtln
      181 atdtedlrge egltvhsgpg aemrflvfnp etmpygsats eadadkalav rtavadlidr
      241 delsdqvykg tyapvysivp saltgstpay eqafgdgsgg psadeaaaal qaagitgpvd
      301 lklqyntdhy gsstsdeyal iknqlersgl ftvdlqstew tqyvkeksts yplyqqgwfa
      361 dypdsdnyln llygtdeaps ilgaavkdda ynevvlrers lapgdertta ieeaqrlaae
      421 kaitvplleg tetviassti sgiddtldgs grfrfgllrs e
//
LOCUS       WP_258064092             307 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: NAD(P)-dependent oxidoreductase [unclassified
            Rathayibacter].
ACCESSION   WP_258064092
VERSION     WP_258064092.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Dengler,U., Niefind,K., Kiess,M. and Schomburg,D.
  TITLE     Crystal structure of a ternary complex of D-2-hydroxyisocaproate
            dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate
            at 1.9 A resolution
  JOURNAL   J Mol Biol 267 (3), 640-660 (1997)
   PUBMED   9126843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02826.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..307
                     /product="NAD(P)-dependent oxidoreductase"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
                     /calculated_mol_wt=31606
     Region          6..307
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(136..138,140,158..160,190..191,218)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:240631"
ORIGIN      
        1 mtvprvavlp rpkpvfaeav esgggvvvgl dgspdallwl sygrtdelaa vleehpsirw
       61 vqlpwagvdv fapvlaasra dvvwtsakga yaepvaehal alvlallrsl peraraaswg
      121 pkkavtlhra svvivgaggi arellrllav fdcrvtivrr gdepvegaar tlpasrlaea
      181 aadadvlvla aaatagterm vdagllarlp ahavlvnvar gslvdtdalv aalaegrlag
      241 aaldvtdpep lpdghplwse prclitphsa dtpeitapll aervranvaa caaggpfvgr
      301 vdpgsgy
//
LOCUS       WP_258064118             255 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerophosphodiester phosphodiesterase family protein
            [Rathayibacter sp. AY1E8].
ACCESSION   WP_258064118
VERSION     WP_258064118.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1E8
  ORGANISM  Rathayibacter sp. AY1E8
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 255)
  AUTHORS   Kim,H. and Farrand,S.K.
  TITLE     Characterization of the acc operon from the nopaline-type Ti
            plasmid pTiC58, which encodes utilization of agrocinopines A and B
            and susceptibility to agrocin 84
  JOURNAL   J Bacteriol 179 (23), 7559-7572 (1997)
   PUBMED   9393724
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03009.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Rathayibacter sp. AY1E8"
                     /db_xref="taxon:2080555"
     Protein         1..255
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /GO_function="GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=26937
     Region          1..233
                     /region_name="PI-PLCc_GDPD_SF"
                     /note="Catalytic domain of phosphoinositide-specific
                     phospholipase C-like phosphodiesterases superfamily;
                     cl14615"
                     /db_xref="CDD:472694"
     Site            order(4,31,33,97,125,204)
                     /site_type="active"
                     /db_xref="CDD:176498"
     Site            order(4,46)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176498"
ORIGIN      
        1 miahrgfgpp aegntlaafe ralaagadll etdarasldg vavlvhdaev idrsgrrhvv
       61 aatrweelad lrlaggarla sleqalaalp rarfnidvks rdaidpvvaa vsgaaaaerv
      121 litsfseirr aaalrrlpga atsasavrfv valvaahlga alpvrlalrg idalqvpera
      181 lglrvaepri larlrvtgce ihlwtiddpe rmeqllalgi dglvtdrtdl araavdafls
      241 arqprpqepr ntppt
//
LOCUS       WP_258064145             421 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Rathayibacter sp. AY1E8].
ACCESSION   WP_258064145
VERSION     WP_258064145.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1E8
  ORGANISM  Rathayibacter sp. AY1E8
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 421)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 421)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02771.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Rathayibacter sp. AY1E8"
                     /db_xref="taxon:2080555"
     Protein         1..421
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=45364
     Region          36..415
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(113,143,145,169,171,398..400,402,404)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mtttaptttd aattigaaae hwstaprpds pdawlaraee vaavlatdal erdragaapf
       61 aevallkasg lvtllgpaeh gggaqewtta lrvvrtvarg dgsigqllgy hylwawaarl
      121 vgtpeqiiav eqlategdll yggavnprds dltvreegde lvftgrksfs tggvvsdltv
      181 legvlegtdt hlfaivptdq egivfgrdwd slgqrltesg sveirgvrvp waaaagfvdk
      241 vyrplvyntl nvpviqqvfa efylgiaqga leraaqytre rtrawpyggd dkeragdewy
      301 vlegygdlqs rlwadealid atgaalsaal hapreeltpr rrgeiavria aakarivedg
      361 latatrvfel tgarasassv gldlywrnlr thslhdplpy krrevgvfal ldtvpepswy
      421 t
//
LOCUS       WP_258064148             133 aa            linear   BCT 02-MAR-2025
DEFINITION  PLP-dependent transferase, partial [Rathayibacter sp. AY1E8].
ACCESSION   WP_258064148
VERSION     WP_258064148.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1E8
  ORGANISM  Rathayibacter sp. AY1E8
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 133)
  AUTHORS   Clausen,T., Huber,R., Prade,L., Wahl,M.C. and Messerschmidt,A.
  TITLE     Crystal structure of Escherichia coli cystathionine gamma-synthase
            at 1.5 A resolution
  JOURNAL   EMBO J 17 (23), 6827-6838 (1998)
   PUBMED   9843488
REFERENCE   2  (residues 1 to 133)
  AUTHORS   Clausen,T., Huber,R., Laber,B., Pohlenz,H.D. and Messerschmidt,A.
  TITLE     Crystal structure of the pyridoxal-5'-phosphate dependent
            cystathionine beta-lyase from Escherichia coli at 1.83 A
  JOURNAL   J Mol Biol 262 (2), 202-224 (1996)
   PUBMED   8831789
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013237.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01053.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Rathayibacter sp. AY1E8"
                     /db_xref="taxon:2080555"
     Protein         1..>133
                     /product="PLP-dependent transferase"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0019346 - transsulfuration [Evidence IEA]"
     Region          33..>102
                     /region_name="MET17"
                     /note="O-acetylhomoserine/O-acetylserine sulfhydrylase,
                     pyridoxal phosphate-dependent [Amino acid transport and
                     metabolism]; COG2873"
                     /db_xref="CDD:442120"
ORIGIN      
        1 mtitapatta ttaaasaats tpapedrasa aagfstrqvh agaapdgahg arvtpvhlsa
       61 gfvfdsfeha rerfagedeg ylytrngnpt teeverrlad leptevlhqq ppvalvqaar
      121 rehpvaglqd pqe
//
LOCUS       WP_258064161             514 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [unclassified Rathayibacter].
ACCESSION   WP_258064161
VERSION     WP_258064161.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..514
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=51624
     Region          23..470
                     /region_name="PRK14995"
                     /note="SmvA family efflux MFS transporter"
                     /db_xref="CDD:184957"
ORIGIN      
        1 msartapvst hdtagaadrv grrawvalav lmlpvllvsv dntvlnfalp siaedlgpsg
       61 tellwivday plvlagllva mgslgdrvgr rrlllvgavg faavsvvaaf aptaaaliga
      121 raalgffgam lmpstlsllr svfpdrdqrr laiaiwatgf avgsgigplv ggvllehfpw
      181 gsvfllavpv llplvvlvpi lvpesrdpqp gpvdvvsill slatmapvvy avksfaehgi
      241 davgvaalvv gvvsgalfvr rqqrraspml dlslfrrgsf saaivvnlls vtalvgglff
      301 lsqhlqlvvg lspleaglvl vpglavmila glgvvpiarr vaprlvvpag llvsavgyil
      361 lalgsgapgg asaltvavaf aflglgigaa etvsnelila napadkagaa savsetayel
      421 gavlgtatlg tvltavyrgg vvlpegldaa qaqragetlg gavsvagelp adsaaslvas
      481 asaafdsgvg wsawlgvvlv laaaavgawr lrrs
//
LOCUS       WP_258064174             270 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF998 domain-containing protein, partial [Rathayibacter sp.
            AY1E8].
ACCESSION   WP_258064174
VERSION     WP_258064174.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1E8
  ORGANISM  Rathayibacter sp. AY1E8
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017959.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06197.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Rathayibacter sp. AY1E8"
                     /db_xref="taxon:2080555"
     Protein         1..>270
                     /product="DUF998 domain-containing protein"
     Region          3..212
                     /region_name="DUF998"
                     /note="Protein of unknown function (DUF998); cl21592"
                     /db_xref="CDD:473918"
     Region          <207..270
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mgtrgagvlw vvsalayvga eavaasafpg ysyarnyisd lgvpevgvfq graidsplha
       61 vmnagfllqg alylaaavtt vraarggsrg lflslavvya vgiavvglvh gssasaqngi
      121 gglhvvgaam aivggnaasi vagaaarrgr apwaletvgi vlgaagllal lmlqvdtrvp
      181 gvdllpdgvw erasvyavta wqlatglrll rrpevprqpr ppqtagsgaq vrsavhrlfq
      241 lgiripeals vvvfddnpws elvtpplsvv
//
LOCUS       WP_258064234             147 aa            linear   BCT 02-MAR-2025
DEFINITION  aconitase family protein, partial [Campylobacter hyointestinalis].
ACCESSION   WP_258064234
VERSION     WP_258064234.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter hyointestinalis
  ORGANISM  Campylobacter hyointestinalis
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012550.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00330.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Campylobacter hyointestinalis"
                     /db_xref="taxon:198"
     Protein         <1..>147
                     /product="aconitase family protein"
     Region          1..>147
                     /region_name="Aconitase"
                     /note="Aconitase catalytic domain; Aconitase catalyzes the
                     reversible isomerization of citrate and isocitrate as part
                     of the TCA cycle; cl00285"
                     /db_xref="CDD:469706"
ORIGIN      
        1 akrrmaradl tlatidhdvs tksmdliacs dmakeqittl mqntkefgvr llglgdkqqg
       61 idhivgpepc ytlpvvtlvc gdshtathga fgalafgigt sevehvmatq tlkqaklktm
      121 kieckgqfqk gvytkdlily liaqygt
//
LOCUS       WP_258064274              95 aa            linear   BCT 02-MAR-2025
DEFINITION  DapH/DapD/GlmU-related protein, partial [Salmonella enterica].
ACCESSION   WP_258064274
VERSION     WP_258064274.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025953.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14602.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         1..>95
                     /product="DapH/DapD/GlmU-related protein"
     Region          3..92
                     /region_name="LbetaH"
                     /note="Left-handed parallel beta-Helix (LbetaH or LbH)
                     domain: The alignment contains 5 turns, each containing
                     three imperfect tandem repeats of a hexapeptide repeat
                     motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing
                     hexapeptide repeats are often enzymes...; cl00160"
                     /db_xref="CDD:469633"
     Site            order(12,14,20,22,32,38,40,58,63..64,66,76,80,82,84)
                     /site_type="other"
                     /note="putative trimer interface [polypeptide binding]"
                     /db_xref="CDD:100045"
     Site            order(58,60..61,66,78,84)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:100045"
ORIGIN      
        1 melgavigyg ldiphhmgiv itkkarigcn lslkqnttvg nkqglkeddf iiignnvdig
       61 antciigsit igdnvtigam sfvnksipan siyit
//
LOCUS       WP_258064304             411 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rathayibacter rathayi].
ACCESSION   WP_258064304
VERSION     WP_258064304.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter rathayi
  ORGANISM  Rathayibacter rathayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Rathayibacter rathayi"
                     /db_xref="taxon:33887"
     Protein         1..411
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=41649
     Region          32..348
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(34..35,38,70,120..121,123..125,128,147,150..151,154,
                     222,225..226,229..231,234,258,262,313..314,318,322,337,
                     340..341,344..345,348)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mtpsphppaq gsilkqplav wavafaavia fmgiglvdpi lpaiaeslra tptetsllft
       61 sylvitgvvm fftswlssri gakktlmigl vlivvfaala gtagsvegvi gfragwgfgn
      121 alfistalst ivgaasggss aaivlyeaal gigiaigpll ggllgsvswr gpffgtavlm
      181 avgaiaiatl lredgprptp tplsapfaal rvpairslaa aalfynigff vllaytpypl
      241 gldemglgft ffgwglgvai tsvfaapllt arlprtvvlr svllllaldl vagglvissr
      301 vglivciivg glllgvvntv ltecvmeatd lprsvassay sgvrflggai appaasalaa
      361 aispafpmya aagavaiaal ivllgrrtla radahepepe lveaqaitfg e
//
LOCUS       WP_258064321             201 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2306 domain-containing protein [Arthrobacter sp. ZGTC131].
ACCESSION   WP_258064321
VERSION     WP_258064321.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC131
  ORGANISM  Arthrobacter sp. ZGTC131
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021576.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10067.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Arthrobacter sp. ZGTC131"
                     /db_xref="taxon:2058898"
     Protein         1..201
                     /product="DUF2306 domain-containing protein"
                     /calculated_mol_wt=21207
     Region          6..123
                     /region_name="DUF2306"
                     /note="Predicted membrane protein (DUF2306); cl02232"
                     /db_xref="CDD:470499"
ORIGIN      
        1 mtmehwnall vshvvaalfv laigpvqifr rrrdrihrtm gclwvaamyy vcvisfwivs
       61 eghftwlhgl saftivtvtl glvsairrni pshrgnmvgs yvgiavafvf avavpgraip
      121 qllaedpata fyvaglvvls vvvvfvslmr ggrtggsgsv saaavlaaqr garrvdstvp
      181 agraglaekr agqpatgrpa s
//
LOCUS       WP_258064355             910 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Arthrobacter sp.
            ZGTC131].
ACCESSION   WP_258064355
VERSION     WP_258064355.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC131
  ORGANISM  Arthrobacter sp. ZGTC131
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..910
                     /organism="Arthrobacter sp. ZGTC131"
                     /db_xref="taxon:2058898"
     Protein         1..910
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=97528
     Region          <25..907
                     /region_name="COG3899"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443106"
     Region          726..907
                     /region_name="CsgD"
                     /note="DNA-binding transcriptional regulator, CsgD family
                     [Transcription]; COG2771"
                     /db_xref="CDD:442052"
     Region          <853..905
                     /region_name="CitB"
                     /note="DNA-binding response regulator, NarL/FixJ family,
                     contains REC and HTH domains [Signal transduction
                     mechanisms, Transcription]; COG2197"
                     /db_xref="CDD:441799"
ORIGIN      
        1 mkaesdqrql tgrreviehv ctiirsrasq avylmagpgi gkssvtdavs ermsaemtil
       61 rihgssslak vpygvlapyt aelpaedads pvavlravwt yfqqlkglkd vplllvvdda
      121 hhlddatasl vvdmmsagwa svlaagrprp glpqalnqlw ydglaervdl rpltgdqvte
      181 vvehtlqgtv pastvqslws asggnpllln cllsdavadg tlakrngiwl llgplpadgp
      241 rlsdvvvkdl lrrtqdeqda lrvialaepv hrsliedvcg aavvrslldn qivsestgrq
      301 selrlwhpil gqsmrhqvsv srslqlrqkl defldprnag aegrlrmvew slecgmdvpd
      361 pdlldaalla vtmfnnagar lmtahvrtpe llahaqsita rtlfnegkyr eaaalldgcw
      421 lelagdpeap hilmlrasah lalgksaqll raesrhqles aglevadswq drihgllela
      481 dagdhegirk viaalgyasv aggsaaadag ggtttgtege rsgtelrgas vietthalaq
      541 tllaqtlvsa glahqahaaa laaapslpvl hgglyffdef vltrlvaasl aagnwesaeh
      601 elstyppera egaatfgggi qvlrglaflr qgqlergyqv llpavealrv ndplqefrfg
      661 salafyaaar lgdapqakrl eqdfiaarha sgpgcellae ayaaaaaeyl drkgsgldkl
      721 relaasdpva aqpgirmecl ilcsdlgdrs vieelaslag avegrwaagw rqlaqawasa
      781 dadllmetaa gleeaglinl aregyaraga lldgagerrr arqavahrek cdeelgerfr
      841 espfvasvps vhltrrerdi velavqglsd reiaqqlmvs vrtveghlyr syvklgvrrr
      901 delalalpkk
//
LOCUS       WP_258064375             361 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Arthrobacter sp. ZGTC131].
ACCESSION   WP_258064375
VERSION     WP_258064375.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC131
  ORGANISM  Arthrobacter sp. ZGTC131
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 361)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Arthrobacter sp. ZGTC131"
                     /db_xref="taxon:2058898"
     Protein         1..361
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=38960
     Region          56..304
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Site            order(61,63,88,119..120,211,244)
                     /site_type="active"
                     /db_xref="CDD:277317"
     Site            order(61,63,88,119,211,244)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277317"
ORIGIN      
        1 mtgpsrqrmw savvpaallv ltliltgcqa gqprppssgr pvtppsidpa vptvhftaqg
       61 dvglgtgarq vldtiaslrp qlnlglgdys yragieqefc dmvtdklgtd fpyqlvtgnh
      121 esdghdgdia nfvkclpnrl pglqgeygtq wyvdypeqdp lvrfimvspg itfhggntln
      181 ysqnsrrwnw taraldgaks rnipwtvvgm htpclsvgry dcqagqdftn mlirkkadlv
      241 ltghehlyqr shqlgggtgc pilvpdafsg dcitdsdasm vegegtvfat vgtggvglyd
      301 vrdddseagy faswsggnrd palgtldvta tadrlsarfv paegytftds fdirrkkplq
      361 r
//
LOCUS       WP_258064392             152 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Arthrobacter sp.
            ZGTC131].
ACCESSION   WP_258064392
VERSION     WP_258064392.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC131
  ORGANISM  Arthrobacter sp. ZGTC131
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 152)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 152)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Arthrobacter sp. ZGTC131"
                     /db_xref="taxon:2058898"
     Protein         1..152
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=16496
     Region          1..>111
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mgrdpkrtee tarairlagg gkvdtfvadl ssqaqvrrla delltlprid alinnaggyw
       61 ntrhttadgi ehtfalnhla pflltnllle rlqldgparv itvssnaqar gastlrtfra
      121 sapipvprpt tspnsrtccs ptnwpedwka lq
//
LOCUS       WP_258064401             407 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Arthrobacter sp. ZGTC131].
ACCESSION   WP_258064401
VERSION     WP_258064401.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC131
  ORGANISM  Arthrobacter sp. ZGTC131
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 407)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 407)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Arthrobacter sp. ZGTC131"
                     /db_xref="taxon:2058898"
     Protein         1..407
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=45163
     Region          45..401
                     /region_name="PRK06836"
                     /note="pyridoxal phosphate-dependent aminotransferase"
                     /db_xref="CDD:180720"
ORIGIN      
        1 mteppggpsp asrralevas ipslrrvndf lgnstysrrq yqpgicdftl gnphqmpqda
       61 yvqalqsavt prddqwfayk tnqadareaa tdslsrlldv pfeaedlylt tggftalala
      121 lkavadpgde viyslppwfl yeplvveagl vpvkvrvnae tfdldldaia aaitprtrvv
      181 iintpnnptg riyppellqs laelldeasa rngrriylvs depynrivfd garfhspvef
      241 ypytllaysy gkthlapger igylalpptm pdrralglai galqvamgwi ypngvlqyal
      301 prlerftidv hqlqrkrdrl vrelgamgyr lrpsegsfyl fvhcpipdde aftealsqed
      361 vfvlpgalfe tpgffrislt asedmvegsl phfraamera gqnrptd
//
LOCUS       WP_258064413             344 aa            linear   BCT 02-MAR-2025
DEFINITION  metal ABC transporter substrate-binding protein [Arthrobacter sp.
            ZGTC131].
ACCESSION   WP_258064413
VERSION     WP_258064413.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC131
  ORGANISM  Arthrobacter sp. ZGTC131
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10100136
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Arthrobacter sp. ZGTC131"
                     /db_xref="taxon:2058898"
     Protein         1..344
                     /product="metal ABC transporter substrate-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /calculated_mol_wt=36477
     Region          55..339
                     /region_name="PsaA"
                     /note="Metal binding protein PsaA. These proteins have
                     been shown to function as initial receptors in ABC
                     transport of Mn2+ and as surface adhesins in some
                     eubacterial species. They belong to the TroA superfamily
                     of periplasmic metal binding proteins that...; cd01137"
                     /db_xref="CDD:238557"
     Site            order(107,171,237,312)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:238557"
ORIGIN      
        1 mpnfvfrcak vvrrtfarrr atthagshps vsrrsaaarg tsratgaaav vllclalaac
       61 ggnasgrgdd grpvvlttft vladvaqnva gdklrvesit kagaeihgye ptpgdirkas
      121 qadlildngl nleawfgqfv egvdvphavv sdgvdvmqis edsykgkpnp hawmspvnvq
      181 iyvdnmvkaf seldpqnaav feangkayka klqavqdemk aklaavpqnq ralvtcegaf
      241 syltrdagle evyiwavnae qqatpqqite aigfvrankv pavfcestvs dapmrqvvea
      301 tgakfggvly vdslsesdgp vptyldlirh dsqlittalt gags
//
LOCUS       WP_258064439             317 aa            linear   BCT 02-MAR-2025
DEFINITION  ROK family protein [Rathayibacter rathayi].
ACCESSION   WP_258064439
VERSION     WP_258064439.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter rathayi
  ORGANISM  Rathayibacter rathayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Rathayibacter rathayi"
                     /db_xref="taxon:33887"
     Protein         1..317
                     /product="ROK family protein"
                     /calculated_mol_wt=33154
     Region          14..253
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mtqpqdgllp rfavgvdigg tsikaslvdv ttgeraarrf avanplgkep edfaaaiagi
       61 vrdvspiagt pvgvgfpgiv rggvvrqtth vsqrwvglda qallseatgv dvvvvndada
      121 agvaerefga mhgregllll ttlgtgigta lvhegvvipn selghlhidg pdfepqvgfs
      181 avrregitle ewagrlgvyy rhlemllspq lfviggaaah vfdefarfld igteivparf
      241 gndagftgaa mvavspdrla pwyrstrgac laltptptpp ptpptprrrg npepsrepag
      301 agsldesgfp qrasrpr
//
LOCUS       WP_258064446             324 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase [Arthrobacter sp. ZGTC131].
ACCESSION   WP_258064446
VERSION     WP_258064446.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC131
  ORGANISM  Arthrobacter sp. ZGTC131
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 324)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Arthrobacter sp. ZGTC131"
                     /db_xref="taxon:2058898"
     Protein         1..324
                     /product="PfkB family carbohydrate kinase"
                     /calculated_mol_wt=32352
     Region          8..297
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
     Site            order(41,259,262)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238571"
     Site            order(192,222,257,260..261,264)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238571"
ORIGIN      
        1 mqenrafdvv vmgeilveva tdvafghgvp aqlgisgdal nvaaaaaaag artgllavlt
       61 dddlgqaiaa rirelgisde lltfrtgqqg vylvhcdpdg qrefsyarsg svgstlgpdd
      121 vdpavfsaag avaaggiaca isassraavl kaaalagrfv fdpnfrprlt sveeatavla
      181 elaprtflvt psfpgetsal lgcdspkeaa vklrslgaan vavtcgaegi qldgdlpnge
      241 hdsswvgaip apsvvdqtga gdafvgtlta rmvlgdalpa aarfgaaaas lvvggkggtg
      301 fiptfeqtsa halrategel ssha
//
LOCUS       WP_258064482             210 aa            linear   BCT 02-MAR-2025
DEFINITION  TetR/AcrR family transcriptional regulator C-terminal
            domain-containing protein [Arthrobacter sp. ZGTC131].
ACCESSION   WP_258064482
VERSION     WP_258064482.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC131
  ORGANISM  Arthrobacter sp. ZGTC131
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 210)
  AUTHORS   Hinrichs,W., Kisker,C., Duvel,M., Muller,A., Tovar,K., Hillen,W.
            and Saenger,W.
  TITLE     Structure of the Tet repressor-tetracycline complex and regulation
            of antibiotic resistance
  JOURNAL   Science 264 (5157), 418-420 (1994)
   PUBMED   8153629
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014906.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02909.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Arthrobacter sp. ZGTC131"
                     /db_xref="taxon:2058898"
     Protein         1..210
                     /product="TetR/AcrR family transcriptional regulator
                     C-terminal domain-containing protein"
                     /GO_process="GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /calculated_mol_wt=23046
     Region          1..>77
                     /region_name="PRK13756"
                     /note="TetR family transcriptional regulator"
                     /db_xref="CDD:172294"
     Region          52..192
                     /region_name="TetR_C_33"
                     /note="Tetracyclin repressor-like, C-terminal domain;
                     cl38988"
                     /db_xref="CDD:476841"
ORIGIN      
        1 mdladesgia altirslaqs mgtkpmslyy yvankdeild givdlvfsei elpspagswr
       61 qemhrraham raalkrhpwa vgllesrtsg patlrhhdat lgtlrragfs vpmtahayal
      121 ldsyiygfal qeaalpfdgr dtaaeitapi merfstgeyp hmveiavehv lkpgydfgde
      181 fdfglnlild glsrliptpg seldkvkdsr
//
LOCUS       WP_258064497             350 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Arthrobacter sp. ZGTC131].
ACCESSION   WP_258064497
VERSION     WP_258064497.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC131
  ORGANISM  Arthrobacter sp. ZGTC131
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 350)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 350)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02771.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Arthrobacter sp. ZGTC131"
                     /db_xref="taxon:2058898"
     Protein         1..350
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=37406
     Region          3..342
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(50,80,82,101,103,327..330,332,334)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 maalkaagvf rilapkavgg fgmgmetyan virrlaqgct stawtaghla ehvwmlarwp
       61 rqvqqevfan gpapmaaatg aplgtaemvp ggysisgtws fasgvmhsew allavhdgdt
      121 rlqclvpvse lelldvwhta glrgtgsndl rahalfvpdy rtldwsllaa adnpgsrihp
      181 dpiihapvav llnmvapaaa lgaaeyavel frermmvrkv kntgenrqad splgqarfsq
      241 aygllatarl hweealrmvs asherrlppl sdeeraayrl slalsgaasa eavqlvaags
      301 ggsiyrlahp lqriqrdvnv llnhptlsid pileqagrgl lgleitipsf
//
LOCUS       WP_258064508             278 aa            linear   BCT 02-MAR-2025
DEFINITION  IclR family transcriptional regulator domain-containing protein
            [Arthrobacter sp. ZGTC131].
ACCESSION   WP_258064508
VERSION     WP_258064508.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC131
  ORGANISM  Arthrobacter sp. ZGTC131
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 278)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
REFERENCE   2  (residues 1 to 278)
  AUTHORS   Galinier,A., Bleicher,F., Negre,D., Perriere,G., Duclos,B.,
            Cozzone,A.J. and Cortay,J.C.
  TITLE     Primary structure of the intergenic region between aceK and iclR in
            the Escherichia coli chromosome
  JOURNAL   Gene 97 (1), 149-150 (1991)
   PUBMED   1995429
REFERENCE   3  (residues 1 to 278)
  AUTHORS   Smith,C.P. and Chater,K.F.
  TITLE     Structure and regulation of controlling sequences for the
            Streptomyces coelicolor glycerol operon
  JOURNAL   J Mol Biol 204 (3), 569-580 (1988)
   PUBMED   3225846
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01614.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Arthrobacter sp. ZGTC131"
                     /db_xref="taxon:2058898"
     Protein         1..278
                     /product="IclR family transcriptional regulator
                     domain-containing protein"
                     /calculated_mol_wt=29410
     Region          24..274
                     /region_name="pcaR_pcaU"
                     /note="beta-ketoadipate pathway transcriptional
                     regulators, PcaR/PcaU/PobR family; TIGR02431"
                     /db_xref="CDD:131484"
ORIGIN      
        1 mtdaaagtas ragrppktda paasdqyvqs larglavira fdtdhsvmtl tevaartdlt
       61 ratarrflht lvelgyvrtd gktfaltaqv lqlgyaylsg lslpqlaqph leelslklge
      121 stsaavldgt diayiarvtt rrimnigitv gtrfpayats mgrvllaalp paklkeylaa
      181 aeikpltpra vgtvpellav ldavraqgwc lldqelelgl msvaapvyhg pkvvaavnvs
      241 lqaqsvaarp dpdayldsvr keivataeri ssdfstgr
//
LOCUS       WP_258064544              86 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4192 family protein [Arthrobacter sp. ZGTC131].
ACCESSION   WP_258064544
VERSION     WP_258064544.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC131
  ORGANISM  Arthrobacter sp. ZGTC131
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025200.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13830.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Arthrobacter sp. ZGTC131"
                     /db_xref="taxon:2058898"
     Protein         1..86
                     /product="DUF4192 family protein"
                     /calculated_mol_wt=9349
ORIGIN      
        1 mgpaaaaprv haqqhqhsap iltaiafvnw wegrgskahq flqlaleadp ayrlarisdl
       61 migsgmvagw nmdrdrafrp wgleas
//
LOCUS       WP_258064570             178 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6314 family protein [Arthrobacter sp. ZGTC131].
ACCESSION   WP_258064570
VERSION     WP_258064570.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC131
  ORGANISM  Arthrobacter sp. ZGTC131
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039724.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19834.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Arthrobacter sp. ZGTC131"
                     /db_xref="taxon:2058898"
     Protein         1..178
                     /product="DUF6314 family protein"
                     /calculated_mol_wt=19248
     Region          12..148
                     /region_name="DUF6314"
                     /note="Family of unknown function (DUF6314); pfam19834"
                     /db_xref="CDD:437666"
ORIGIN      
        1 mlgpslpdaa pegrwsvqrt madraagtrg tfsgvvtfsg tdddgalrfh eegtvrwpaa
       61 agetftgpat rdyvlrptds pdamdmefhd grpfhrmsfs adasqdrhwc npdtyrvtys
      121 ltgpdqfsyt wdvtgprkdl llesvlrrlp aaavspeqld tgqlgsgqlg tdplgsnp
//
LOCUS       WP_258064601             219 aa            linear   BCT 02-MAR-2025
DEFINITION  HAD family hydrolase [Arthrobacter sp. ZGTC131].
ACCESSION   WP_258064601
VERSION     WP_258064601.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC131
  ORGANISM  Arthrobacter sp. ZGTC131
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 219)
  AUTHORS   Osman,C., Haag,M., Wieland,F.T., Brugger,B. and Langer,T.
  TITLE     A mitochondrial phosphatase required for cardiolipin biosynthesis:
            the PGP phosphatase Gep4
  JOURNAL   EMBO J 29 (12), 1976-1987 (2010)
   PUBMED   20485265
REFERENCE   2  (residues 1 to 219)
  AUTHORS   Hisano,T., Hata,Y., Fujii,T., Liu,J.Q., Kurihara,T., Esaki,N. and
            Soda,K.
  TITLE     Crystal structure of L-2-haloacid dehalogenase from Pseudomonas sp.
            YL. An alpha/beta hydrolase structure that is different from the
            alpha/beta hydrolase fold
  JOURNAL   J Biol Chem 271 (34), 20322-20330 (1996)
   PUBMED   8702766
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012905.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00702.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Arthrobacter sp. ZGTC131"
                     /db_xref="taxon:2058898"
     Protein         1..219
                     /product="HAD family hydrolase"
                     /calculated_mol_wt=22723
     Region          1..212
                     /region_name="PhnX-like"
                     /note="phosphonatase-like hydrolase; TIGR03351"
                     /db_xref="CDD:274534"
ORIGIN      
        1 mvgttvfdgg lmeramsrtl aeqgipegsa efegmlgyar ehsgisrmtv fselfddpka
       61 avnanrmfel ncdeliaagg irpvpgaees igwlrdagik vclatgfgrh tqnmvleslg
      121 wmgladlslc padagrgrpf pdmvltavla ldiddvrkva vvgdtsadih tglragatva
      181 agvltgahse atlraagata vvpsikdfpa llerraagl
//
LOCUS       WP_258064647             123 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Arthrobacter sp. ZGTC131].
ACCESSION   WP_258064647
VERSION     WP_258064647.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC131
  ORGANISM  Arthrobacter sp. ZGTC131
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Arthrobacter sp. ZGTC131"
                     /db_xref="taxon:2058898"
     Protein         1..123
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=12199
     Region          <13..122
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mkyaigpisq agggsivnis saaatlggag tyahyaaaka avealtvgls kelagkkirv
       61 navspgtvwt dfhqdpdrpa kiaavipmgr agkpdeiaga iawllpddas yatgttiria
      121 ggl
//
LOCUS       WP_258064638             417 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3027 domain-containing protein [Rathayibacter sp. AY1E5].
ACCESSION   WP_258064638
VERSION     WP_258064638.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1E5
  ORGANISM  Rathayibacter sp. AY1E5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022674.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11228.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Rathayibacter sp. AY1E5"
                     /db_xref="taxon:2080553"
     Protein         1..417
                     /product="DUF3027 domain-containing protein"
                     /calculated_mol_wt=42893
     Region          <4..169
                     /region_name="LGT"
                     /note="Prolipoprotein diacylglyceryl transferase; cl00478"
                     /db_xref="CDD:469786"
     Region          240..>308
                     /region_name="DUF3027"
                     /note="Protein of unknown function (DUF3027); pfam11228"
                     /db_xref="CDD:431743"
ORIGIN      
        1 mpdaddttde qgpveetvaa pttedarveq ssgegdsgep dttpaeedss aedasgadee
       61 iaadqaapvd eapsgegesd aalpvteasg edsasaeetp paddvaaeag apgadtasaa
      121 vpapaedaat adnstpadda gtpensapaq dvapaddsap aedatpaeds alvmdepsda
      181 dgalaadats adddaspgea deaaadeape pvyeadavla rsldvaraal aeiapegtig
      241 elvttlaqge hvvslqfanl mrgypgwlwt atlsridene dvnvlevell pgegavlapd
      301 wvpwsvrlad yqtaqdalge evedadddel edaeeddldd eseddsdede gdsdddddpv
      361 dddddsddds dgddsddeds deddsddpdd dsddedsddv epepapaptt rrrrrrr
//
LOCUS       WP_258064658             176 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Arthrobacter sp. ZGTC131].
ACCESSION   WP_258064658
VERSION     WP_258064658.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC131
  ORGANISM  Arthrobacter sp. ZGTC131
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Arthrobacter sp. ZGTC131"
                     /db_xref="taxon:2058898"
     Protein         1..176
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=19129
     Region          23..158
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mekivppspg dprrplgprd pgdawvegeh grfwgrfgsa gllahdagkg illqhratws
       61 dhggtwglpg galhqgedpv tgalreafee aavpeknvrv lftsvfdvgy wsyttvavqv
      121 vepfepaisd pesieldwip vhevaainlh pafaaswpal seklmnhrrp llhdgr
//
LOCUS       WP_258064657             175 aa            linear   BCT 02-MAR-2025
DEFINITION  recombinase family protein [Rathayibacter sp. AY1E5].
ACCESSION   WP_258064657
VERSION     WP_258064657.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1E5
  ORGANISM  Rathayibacter sp. AY1E5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 175)
  AUTHORS   Yang,W. and Steitz,T.A.
  TITLE     Crystal structure of the site-specific recombinase gamma delta
            resolvase complexed with a 34 bp cleavage site
  JOURNAL   Cell 82 (2), 193-207 (1995)
   PUBMED   7628011
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012464.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00239.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Rathayibacter sp. AY1E5"
                     /db_xref="taxon:2080553"
     Protein         1..175
                     /product="recombinase family protein"
                     /GO_function="GO:0000150 - DNA strand exchange activity
                     [Evidence IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /calculated_mol_wt=18969
     Region          <60..>167
                     /region_name="SpoIVCA"
                     /note="Site-specific DNA recombinase SpoIVCA/DNA invertase
                     PinE [Replication, recombination and repair]; COG1961"
                     /db_xref="CDD:441564"
ORIGIN      
        1 mpllthrtpa plplplplpl pssrwsergq prnsqrrrrs piasqrkgfc yehveaqrws
       61 iavldfdldt statgrliag mvvqigqwer emigertkaa lavkradgiq lgkpstipae
      121 vqalilqrka agaslsaiar slnadvvptp sgagrwthsv iggvvrrwts kevsa
//
LOCUS       WP_258064706             214 aa            linear   BCT 02-MAR-2025
DEFINITION  Ltp family lipoprotein [Rathayibacter sp. AY1E5].
ACCESSION   WP_258064706
VERSION     WP_258064706.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1E5
  ORGANISM  Rathayibacter sp. AY1E5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 214)
  AUTHORS   Bebeacua,C., Lorenzo Fajardo,J.C., Blangy,S., Spinelli,S.,
            Bollmann,S., Neve,H., Cambillau,C. and Heller,K.J.
  TITLE     X-ray structure of a superinfection exclusion lipoprotein from
            phage TP-J34 and identification of the tape measure protein as its
            target
  JOURNAL   Mol Microbiol 89 (1), 152-165 (2013)
   PUBMED   23692331
REFERENCE   2  (residues 1 to 214)
  AUTHORS   Neve,H., Zenz,K.I., Desiere,F., Koch,A., Heller,K.J. and Brussow,H.
  TITLE     Comparison of the lysogeny modules from the temperate Streptococcus
            thermophilus bacteriophages TP-J34 and Sfi21: implications for the
            modular theory of phage evolution
  JOURNAL   Virology 241 (1), 61-72 (1998)
   PUBMED   9454717
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019191.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07553.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Rathayibacter sp. AY1E5"
                     /db_xref="taxon:2080553"
     Protein         1..214
                     /product="Ltp family lipoprotein"
                     /calculated_mol_wt=21902
     Region          <1..48
                     /region_name="YqfX"
                     /note="Uncharacterized sporulation protein YqfX, contains
                     DUF308 domain [Cell cycle control, cell division,
                     chromosome partitioning]; COG5921"
                     /db_xref="CDD:444622"
     Region          <52..>126
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          116..162
                     /region_name="Lipoprotein_Ltp"
                     /note="Host cell surface-exposed lipoprotein; pfam07553"
                     /db_xref="CDD:462206"
     Region          165..212
                     /region_name="Lipoprotein_Ltp"
                     /note="Host cell surface-exposed lipoprotein; pfam07553"
                     /db_xref="CDD:462206"
ORIGIN      
        1 mpvfgalvgi aavvlgilal rrgqskamsi tgvvlgglav lasllttigf gaavnsassd
       61 rpaavivess epttapvvpa teeaevveta epapvetvap apapvetaaa aqvspefasa
      121 likaqsysem lhmskaglyg qltseygeqf speaaqyavd tvsadwnana lakakdyqaq
      181 mamapeaird qltseygeqf tsdeadyaia hlnd
//
LOCUS       WP_258064713             232 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein,
            partial [Arthrobacter sp. ZGTC131].
ACCESSION   WP_258064713
VERSION     WP_258064713.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC131
  ORGANISM  Arthrobacter sp. ZGTC131
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 232)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Arthrobacter sp. ZGTC131"
                     /db_xref="taxon:2058898"
     Protein         <1..>232
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
     Region          <1..>232
                     /region_name="FtsI"
                     /note="Cell division protein FtsI, peptidoglycan
                     transpeptidase (Penicillin-binding protein 2) [Cell cycle
                     control, cell division, chromosome partitioning, Cell
                     wall/membrane/envelope biogenesis]; COG0768"
                     /db_xref="CDD:440531"
ORIGIN      
        1 rttlrtypsg svagsivgfl gtdgpqegme ltqddvlage agsrtyeisv dgiripyatn
       61 edvpvrdgds vklsidqdlq wfaqqtiasq vqeynadwgn vvvveaktgr iitmaesttv
      121 dpndpgqtpa esrqplsvtv pfepgsttkv itmaaaleqg iidplsqfei pstytvdgqt
      181 fkdafdhgtv hmtaagiltk smntgtvmig qqltpqeryd wlkkfgigep ln
//
LOCUS       WP_258064715             213 aa            linear   BCT 02-MAR-2025
DEFINITION  SLC13 family permease, partial [Arthrobacter sp. ZGTC131].
ACCESSION   WP_258064715
VERSION     WP_258064715.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. ZGTC131
  ORGANISM  Arthrobacter sp. ZGTC131
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015557.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03600.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Arthrobacter sp. ZGTC131"
                     /db_xref="taxon:2058898"
     Protein         <1..>213
                     /product="SLC13 family permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <1..>213
                     /region_name="ArsB"
                     /note="Na+/H+ antiporter NhaD or related arsenite permease
                     [Inorganic ion transport and metabolism]; COG1055"
                     /db_xref="CDD:440675"
     Region          <1..35
                     /region_name="ArsB_NhaD_permease"
                     /note="Anion permease ArsB/NhaD. These permeases have been
                     shown to translocate sodium, arsenate, antimonite, sulfate
                     and organic anions across biological membranes in all
                     three kingdoms of life. A typical anion permease contains
                     8-13 transmembrane helices...; cl21473"
                     /db_xref="CDD:473875"
ORIGIN      
        1 avaivapial gfaakhkinp lmmgmmvihg aqaggfspia vygvtvngii getdlesspl
       61 avflasllfn tfialilffv lggsklrsgk vggfveevaq armnlstagr advafkgfgs
      121 diygprdpag dgltatksrt elfpqivtia glvalavial gfkvdvgfvs itiavilalv
      181 spqaqkgain kiswttvlli cgmltfvgvl qea
//
LOCUS       WP_258064734             243 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: D-arabinono-1,4-lactone oxidase [unclassified
            Pseudoclavibacter].
ACCESSION   WP_258064734
VERSION     WP_258064734.1
KEYWORDS    RefSeq.
SOURCE      unclassified Pseudoclavibacter
  ORGANISM  unclassified Pseudoclavibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
REFERENCE   1  (residues 1 to 243)
  AUTHORS   Huh,W.K., Lee,B.H., Kim,S.T., Kim,Y.R., Rhie,G.E., Baek,Y.W.,
            Hwang,C.S., Lee,J.S. and Kang,S.O.
  TITLE     D-Erythroascorbic acid is an important antioxidant molecule in
            Saccharomyces cerevisiae
  JOURNAL   Mol Microbiol 30 (4), 895-903 (1998)
   PUBMED   10094636
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015963.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04030.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="unclassified Pseudoclavibacter"
                     /db_xref="taxon:2615177"
     Protein         1..243
                     /product="D-arabinono-1,4-lactone oxidase"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0003885 - D-arabinono-1,4-lactone oxidase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=27276
     Region          <145..240
                     /region_name="ALO"
                     /note="D-arabinono-1,4-lactone oxidase; cl21623"
                     /db_xref="CDD:451334"
ORIGIN      
        1 mdiqprysmr qdaygpmpwr tylenldqvh ragysvsaft tfdgavsevl vksripeyed
       61 didveddlfg sprlpgeads esvtardgsv gpwwdrlphf piastpsvgs elqsehfvpl
      121 rhaaaaleav rahsarlqpl lhvcelrtma gdelwlsptq gedvlcvaft wkklaapvle
      181 llsviersls pfearphwgk ltslgrdefn elyprlpsfr rlvseadadr kfvspfserl
      241 ldi
//
LOCUS       WP_258064759             223 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Pseudoclavibacter sp. AY1H1].
ACCESSION   WP_258064759
VERSION     WP_258064759.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. AY1H1
  ORGANISM  Pseudoclavibacter sp. AY1H1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
REFERENCE   1  (residues 1 to 223)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Pseudoclavibacter sp. AY1H1"
                     /db_xref="taxon:2080584"
     Protein         1..223
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=23029
     Region          6..216
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mteeiddpir vlvaddhaai raglrlllea hgvevvgeag dgaaairnar alrpdvvlmd
       61 vrmpgtdgie atraivadsl aqvlvlttfd ldeyvfgavr agaagfllkt tsgpalqaav
      121 eavargegal spevtrrlld rfaqtgdgap tptpevpgla eltarerevl salgeglsns
      181 gigqrmhisa stakthvsrv laklgvvsrm eaavlarrag lsd
//
LOCUS       WP_258064935             151 aa            linear   BCT 02-MAR-2025
DEFINITION  YitT family protein [Rathayibacter rathayi].
ACCESSION   WP_258064935
VERSION     WP_258064935.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter rathayi
  ORGANISM  Rathayibacter rathayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014627.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02588.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Rathayibacter rathayi"
                     /db_xref="taxon:33887"
     Protein         1..151
                     /product="YitT family protein"
                     /calculated_mol_wt=15902
     Region          <26..>139
                     /region_name="YitT"
                     /note="Uncharacterized membrane-anchored protein YitT,
                     contains DUF161 and DUF2179 domains [Function unknown];
                     COG1284"
                     /db_xref="CDD:440895"
ORIGIN      
        1 mqlrmrlvga aqqahrpsts tsgtkgwrft lrtmfsivlv sllaglhpla fselriepvy
       61 gvltgdilag igllilvrhg sslggfsvva litqerlgwr agyvmmalda cvvaaallvv
      121 palnvlisaa gvvvlnlvla fnhrpgrylg s
//
LOCUS       WP_258064887             112 aa            linear   BCT 02-MAR-2025
DEFINITION  DapH/DapD/GlmU-related protein [Pseudoclavibacter sp. AY1H1].
ACCESSION   WP_258064887
VERSION     WP_258064887.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. AY1H1
  ORGANISM  Pseudoclavibacter sp. AY1H1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025953.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14602.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Pseudoclavibacter sp. AY1H1"
                     /db_xref="taxon:2080584"
     Protein         1..112
                     /product="DapH/DapD/GlmU-related protein"
                     /calculated_mol_wt=11398
     Region          <2..108
                     /region_name="LbetaH"
                     /note="Left-handed parallel beta-Helix (LbetaH or LbH)
                     domain: The alignment contains 5 turns, each containing
                     three imperfect tandem repeats of a hexapeptide repeat
                     motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing
                     hexapeptide repeats are often enzymes...; cl00160"
                     /db_xref="CDD:469633"
     Site            order(10,12,16,18,30,36,38,65,70..71,73,83,87,89,91)
                     /site_type="other"
                     /note="putative trimer interface [polypeptide binding]"
                     /db_xref="CDD:100047"
     Site            order(65,67..68,73,85,91)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:100047"
ORIGIN      
        1 mnirigenvf inqgcrlndi ggieigddvm lgpnvsllts ghpvdparrr teitsapiri
       61 gknvwigasa limqgvtigd daavaagavv thdvaartvv ggvsatviks ld
//
LOCUS       WP_258064962             317 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3800 domain-containing protein [Rathayibacter sp. AY1D7].
ACCESSION   WP_258064962
VERSION     WP_258064962.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D7
  ORGANISM  Rathayibacter sp. AY1D7
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12686.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Rathayibacter sp. AY1D7"
                     /db_xref="taxon:2080547"
     Protein         1..317
                     /product="DUF3800 domain-containing protein"
                     /calculated_mol_wt=36054
ORIGIN      
        1 mrivqgalcg searcllvge rllgpghlat vprsagafvv hpswaaagds rtckhsqrar
       61 fdpcwpghvs ggqsagklsp trdrrwqlsn vvniycdesc hlpndgqplm vlgavscpvd
      121 ktreiavrlr eirerhnlpa pfevkwakvs agkfeyyrdl vdyffddddl afrgvvankl
      181 ilnhakfsqt hddwyykmmf qllarilvpg ssyriyldkk dsrsgekvrr lheilsnnmy
      241 dfdhriverv qiieshavaq mqlsdlllga vsyinrgldt npaklalier ikdrsgyalt
      301 rstllreekf nlfhwmr
//
LOCUS       WP_258064966             260 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphatase PAP2 family protein [Rathayibacter sp. AY1D7].
ACCESSION   WP_258064966
VERSION     WP_258064966.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D7
  ORGANISM  Rathayibacter sp. AY1D7
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 260)
  AUTHORS   Neuwald,A.F.
  TITLE     An unexpected structural relationship between integral membrane
            phosphatases and soluble haloperoxidases
  JOURNAL   Protein Sci 6 (8), 1764-1767 (1997)
   PUBMED   9260289
REFERENCE   2  (residues 1 to 260)
  AUTHORS   Stukey,J. and Carman,G.M.
  TITLE     Identification of a novel phosphatase sequence motif
  JOURNAL   Protein Sci 6 (2), 469-472 (1997)
   PUBMED   9041652
REFERENCE   3  (residues 1 to 260)
  AUTHORS   Messerschmidt,A. and Wever,R.
  TITLE     X-ray structure of a vanadium-containing enzyme: chloroperoxidase
            from the fungus Curvularia inaequalis
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 392-396 (1996)
   PUBMED   8552646
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013718.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01569.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Rathayibacter sp. AY1D7"
                     /db_xref="taxon:2080547"
     Protein         1..260
                     /product="phosphatase PAP2 family protein"
                     /calculated_mol_wt=28372
     Region          69..237
                     /region_name="PAP2_like"
                     /note="PAP2_like proteins, a super-family of histidine
                     phosphatases and vanadium haloperoxidases, includes type 2
                     phosphatidic acid phosphatase or lipid phosphate
                     phosphatase (LPP), Glucose-6-phosphatase,
                     Phosphatidylglycerophosphatase B and bacterial acid...;
                     cl00474"
                     /db_xref="CDD:469784"
     Site            order(151,158,173..175,210,216,220)
                     /site_type="active"
                     /db_xref="CDD:239486"
ORIGIN      
        1 mdhrddrlst epgiarpdav qrarmreqvp sddvaarllt keaahrvsrr wplisaslai
       61 lltvllavli afrptsafrf dvewmdeive hrspvwdipa lvmntvgagl vgttliplgi
      121 vavllvfrrr waalyyaiaa lvsvgatqlv kelvgrarpa dmlvtsdygs fpsgqtanaa
      181 ttamvlalvf pllwawiagf ldslammasr tylgahwlsd tvgglrvgmg galvvwarva
      241 grwrteaglr hapiwirrtt
//
LOCUS       WP_258064979             108 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: Mur ligase domain-containing protein, partial
            [unclassified Rathayibacter].
ACCESSION   WP_258064979
VERSION     WP_258064979.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 108)
  AUTHORS   Bertrand,J.A., Auger,G., Fanchon,E., Martin,L., Blanot,D., van
            Heijenoort,J. and Dideberg,O.
  TITLE     Crystal structure of UDP-N-acetylmuramoyl-L-alanine:D-glutamate
            ligase from Escherichia coli
  JOURNAL   EMBO J 16 (12), 3416-3425 (1997)
   PUBMED   9218784
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013396.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01225.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..>108
                     /product="Mur ligase domain-containing protein"
                     /GO_function="GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
     Region          45..>108
                     /region_name="MurE"
                     /note="UDP-N-acetylmuramyl tripeptide synthase [Cell
                     wall/membrane/envelope biogenesis]; COG0769"
                     /db_xref="CDD:440532"
ORIGIN      
        1 mpvfrllepl haagvaladl asdrlrlhgd gsdvritavt vahteagpga lfaalpgrrs
       61 hgarfaadaa aagavavltd aggldearas glpvllsddp rtalgpva
//
LOCUS       WP_258064991             120 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6804 family protein [Rathayibacter sp. AY2B3].
ACCESSION   WP_258064991
VERSION     WP_258064991.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY2B3
  ORGANISM  Rathayibacter sp. AY2B3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042853.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20619.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Rathayibacter sp. AY2B3"
                     /db_xref="taxon:2080569"
     Protein         1..120
                     /product="DUF6804 family protein"
                     /calculated_mol_wt=12647
     Region          28..108
                     /region_name="DUF6804"
                     /note="Family of unknown function (DUF6804); pfam20619"
                     /db_xref="CDD:466768"
ORIGIN      
        1 mstrkpsrat aarypsrdra rmalapgilg aivllaglal vgsdaydfir ypvailaavi
       61 gwfaiqarvl lwliglvpvl vlwnpvlpfa fpnaiwssls laavgvfvaa glvirvptpe
//
LOCUS       WP_258065159             514 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [unclassified Rathayibacter].
ACCESSION   WP_258065159
VERSION     WP_258065159.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..514
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=51767
     Region          23..470
                     /region_name="PRK14995"
                     /note="SmvA family efflux MFS transporter"
                     /db_xref="CDD:184957"
ORIGIN      
        1 msartapvst hdtagaadrv grrawvalav lmlpvllvsv dntvlnfalp siaedlgpsg
       61 tellwivday plvlagllva mgslgdrvgr rrlllvgavg faavsvvaaf aptaaaliga
      121 raalgffgam lmpstlsllr svfrdrdqrr laiaiwatgf avgsgigplv ggvllehfpw
      181 gsvfllavpv llplvvlvpi lvpesrdpqp gpvdvvsill slatmapvvy avksfaehgi
      241 davgiaalvv gvvsgvlfvr rqqrraspml dlslfrrgsf saaivvnlls vtalvgglff
      301 lsqhlqlvvg lspleaglvl vpglavmila glgvvpiarr vaprlvvpag llvsavgyil
      361 lalgseapgg asalavavaf aflglgigaa etvsnelila napadkagaa savsetayel
      421 gavlgtatlg tvltavyrgg vvlpegldaa qaqragetlg gavsvagelp adsaaslvas
      481 asaafdsgvg wsawlgvvlv laaaavgawr lrrs
//
LOCUS       WP_258065165             403 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: cupin domain-containing protein [unclassified
            Rathayibacter].
ACCESSION   WP_258065165
VERSION     WP_258065165.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 403)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012417.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00190.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..403
                     /product="cupin domain-containing protein"
                     /GO_function="GO:0045735 - nutrient reservoir activity
                     [Evidence IEA]"
                     /calculated_mol_wt=44255
     Region          32..393
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     Site            order(87,97..98,100,102,119,121,123,125,150,152,172,174,
                     176,202)
                     /site_type="other"
                     /note="intramolecular domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:380438"
     Site            order(103,111,114,116,120,159,173,175)
                     /site_type="active"
                     /db_xref="CDD:380438"
ORIGIN      
        1 mepddstaph hetpgfgdpd lpqegivnte gdpsantmtg pqnrvleglf pnqiaapatd
       61 istqpffwss fnisprrvqr ggwareltqa dfaisneiag vnmyleaggi relhwhqsae
      121 walmtrgncr ittlsrtgrp svddvqegdl wyfppglphs lqglgpdgae fvlafddgeq
      181 sesntllltd wfahtppdvl aknfgvaqev frdiplhdlw ifpgdvpgdl qadraaagvq
      241 dgdeavifrl srsepvhqns ggriqiadst nfpasrtvsa alttvepgsm relhwhpnad
      301 ewqyylrgsa rmtvfntgph anttdfhagd vgvvrrnfgh yventgddtl vyietfkssr
      361 yeevslaqwl shlppslvaq hlnipeevla tfppgtqgit plr
//
LOCUS       WP_258065199             414 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: glycosyltransferase [unclassified Rathayibacter].
ACCESSION   WP_258065199
VERSION     WP_258065199.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..414
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=44672
     Region          20..395
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 msdprdasrp gspdsrpltv vigcdtfapd vngaakfaer laaglaqrgh evhvvapsad
       61 gwsgtrveth egqriivhrl yswrwyphdw lrfampwrir qnsarildev kpdvvhfqsh
      121 iivgrglgie aakrgirivg tnhfmpenml eftllpkavq akavamawra arrtfgraea
      181 vttptrkaaq flekytglrg vhaiscgida dnytpdfaar agdsilfvgr vtgekhidvl
      241 lravalldpa ldakleivgg gdqmrnlqql aatlgiadrv rftgyvsdae lkeaytratv
      301 fampsiaelq siatmeamas alpvvaadam alphlvhdge ngylfapgsa ealadrltav
      361 ltadqedlea mkraslqiva ahdinrtist feslyrgepv adpasdaasa paat
//
LOCUS       WP_258065217             307 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-dependent oxidoreductase [Rathayibacter sp. AY2B3].
ACCESSION   WP_258065217
VERSION     WP_258065217.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY2B3
  ORGANISM  Rathayibacter sp. AY2B3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Dengler,U., Niefind,K., Kiess,M. and Schomburg,D.
  TITLE     Crystal structure of a ternary complex of D-2-hydroxyisocaproate
            dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate
            at 1.9 A resolution
  JOURNAL   J Mol Biol 267 (3), 640-660 (1997)
   PUBMED   9126843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02826.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Rathayibacter sp. AY2B3"
                     /db_xref="taxon:2080569"
     Protein         1..307
                     /product="NAD(P)-dependent oxidoreductase"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
                     /calculated_mol_wt=31841
     Region          6..307
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(136..138,140,158..160,190..191,218)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:240631"
ORIGIN      
        1 mtvprvavlp rpkpvfaeav esgggvvvgl despdallwl sygrtdelaa vleehptirw
       61 vqlpwagvdv fapvlaasra dvvwtsakga yaepvaehal alvlallrsl peraraeswg
      121 pkkavtlhra svvivgaggi arellrllav fdcrvtivrr gdepvegaar tlpasrlaea
      181 aadadvlvla aaatagterm vdagllarlp aravlvnvar gslvdtdalv aalaegrlag
      241 aaldvtdpep lpdghplwse prclitphsa dtpeitapll aervranvaa caagepfvgr
      301 vdpgsgy
//
LOCUS       WP_258065242             423 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Rathayibacter sp. AY1E1].
ACCESSION   WP_258065242
VERSION     WP_258065242.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1E1
  ORGANISM  Rathayibacter sp. AY1E1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 423)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 423)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02771.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Rathayibacter sp. AY1E1"
                     /db_xref="taxon:2080549"
     Protein         1..423
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=45488
     Region          39..417
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(115,145,147,171,173,400..402,404,406)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mtttapttag adaattigaa aehwsaaprp dspdawlvra eevavvlatd alerdragaa
       61 pfaevallka aglvtllgpa ehgggaqewt talrvvrtva rgdgsigqll gyhylwawaa
      121 rlvgtpeqii aveqlategd llyggavnpr dsdltvreeg delvftgrks fstggvvsdl
      181 tvlegvlegt dthlfaivpt dqegivfgrd wdslgqrlte sgsveirgvr vpwaaaagfv
      241 dkvyrplvyn tlnvpviqqv faefylgisq galeraaqyt rertrawpyg gddkeragde
      301 wyvlegygdl qsrlwadeal idatgaalsa alhapreelt prrrgeiavr iaaakarive
      361 dglatatrvf eltgarasas svgldlywrn lrthslhdpl pykrrevgvf alldtvpeps
      421 wyt
//
LOCUS       WP_258065244             731 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase domain-containing protein [Rathayibacter sp.
            AY2B3].
ACCESSION   WP_258065244
VERSION     WP_258065244.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY2B3
  ORGANISM  Rathayibacter sp. AY2B3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 731)
  AUTHORS   Naumoff,D.G.
  TITLE     GH97 is a new family of glycoside hydrolases, which is related to
            the alpha-galactosidase superfamily
  JOURNAL   BMC Genomics 6, 112 (2005)
   PUBMED   16131397
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 731)
  AUTHORS   Liu,Y., Choudhury,P., Cabral,C.M. and Sifers,R.N.
  TITLE     Oligosaccharide modification in the early secretory pathway directs
            the selection of a misfolded glycoprotein for degradation by the
            proteasome
  JOURNAL   J Biol Chem 274 (9), 5861-5867 (1999)
   PUBMED   10026209
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019583.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07971.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Rathayibacter sp. AY2B3"
                     /db_xref="taxon:2080569"
     Protein         1..731
                     /product="glycoside hydrolase domain-containing protein"
                     /calculated_mol_wt=79668
     Region          2..725
                     /region_name="COG3537"
                     /note="Putative alpha-1,2-mannosidase [Carbohydrate
                     transport and metabolism]"
                     /db_xref="CDD:442758"
ORIGIN      
        1 mdpflgteat alpeptglaa twwspkpqig nthpgatypl gmvsacsysg ayptgygryd
       61 lalegvpptl hdgleasgft hfqqsgtgai rkyynylrvt pmlepldelg rswaledeva
      121 epgyyaatls sgvraeltvg pasvvhrytf pehrsarvvv dlslgglaip sgatvplraq
      181 lhsispgvaa gevvmegapl avhlecdalq wrqmlwydrr lmpggtrldf dhirpttlrp
      241 fglmwagpst agqtvelrmg fslrgtdrar enlhrdvppa gtgfdqrrdr trktwrkrlr
      301 tiavdtpsae retvfstaly hslikpclap sespfwptdg pfvfdistmw diyrtqlpll
      361 tmllpdrave iaaalltice eegnfpigyr makgsdrfsr qgsalahtfl adlcrlglpg
      421 idwdaalvhm sedlkrmyge eflaageahp ishtldlahg ywctavvarh vgdlelaeql
      481 eeraaqwvna fdlrsgllkd styyegtrhn ysfrllhdma grialsggde gfvnqldeff
      541 gfgaepvvqp glrperseml agaelgrfeg lnnepdmdsp wayhyagrpd rtaeivhgvl
      601 hqrfgpgrgg lpgnddsggl sswyvwaslg lfpvagqglv linapsfara svaiggadle
      661 irttgfvepg pggpvqyvqs aefdgaplta svltaaalhr ggelllhlgp epsdwgtlpe
      721 hrppswparr p
//
LOCUS       WP_258065317             386 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rathayibacter sp. AY2B3].
ACCESSION   WP_258065317
VERSION     WP_258065317.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY2B3
  ORGANISM  Rathayibacter sp. AY2B3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Rathayibacter sp. AY2B3"
                     /db_xref="taxon:2080569"
     Protein         1..386
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=37990
     Region          43..348
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(57,108..109,111..113,116,136,139..140,143,218,
                     221..222,225..227,230,257,261,310..311,315,319,335,
                     338..339,342..343,346)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mrdrlatpsl lahavliqav afllrpaavy qaiqldvpsw algalgasfa lvpllialpt
       61 gglvdrvgar avmavgslva vgaatvllla ggsvagllvg iallgaghlg cvvgqqtvva
      121 ggtggtrlds rfgyytfaas lgqaigpafi pvlaggsvrp dpaplflvgg ilavlllvst
      181 agirspsprg paaeeetapg stlgllrvpg laralltsat vvaavdltvv ylpalgaerg
      241 lpagvvgall tvralasmas rlllgaatar lgrtrvmmgg ilisalclvl valpaptvll
      301 fvavaalglg lgigqpitms wliertpadr hgralalrla gnrlglialp sllgvlaaaa
      361 gaggvligtg aavgatllll rgvrld
//
LOCUS       WP_258065329             286 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: SDR family NAD(P)-dependent oxidoreductase
            [unclassified Rathayibacter].
ACCESSION   WP_258065329
VERSION     WP_258065329.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 286)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 286)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..286
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=30298
     Region          7..273
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(14,16..17,19,38..40,86..88,144..146,167,171,
                     197..200)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(108,146,167,171)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mvtdmtgrvv vltgassgig rvaagalasa garvavvgrn pertravaad vggdafladf
       61 drlddvrala dglleryeri dvlannaggl vshraetvdg hertiqsnhl apflltrlll
      121 prmietsrer agvrvvstas lanrfgrlrl ddldnrrgpw lggwraygts klvtilfire
      181 laerllttsv daysfhpgvv stsfgadstm mklmtslsvg sfgisaeaga vplitlasep
      241 dvgaasgtyf dqltprgsln pqardralah dlwtlssrlv gvsptl
//
LOCUS       WP_258065403             412 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3027 domain-containing protein [Rathayibacter sp. AY1B8].
ACCESSION   WP_258065403
VERSION     WP_258065403.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1B8
  ORGANISM  Rathayibacter sp. AY1B8
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022674.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11228.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Rathayibacter sp. AY1B8"
                     /db_xref="taxon:2080533"
     Protein         1..412
                     /product="DUF3027 domain-containing protein"
                     /calculated_mol_wt=42603
     Region          <14..161
                     /region_name="rne"
                     /note="ribonuclease E; Reviewed; PRK10811"
                     /db_xref="CDD:236766"
     Region          236..>304
                     /region_name="DUF3027"
                     /note="Protein of unknown function (DUF3027); pfam11228"
                     /db_xref="CDD:431743"
ORIGIN      
        1 mpdadgttde qgpveetvaa pttedarveq speegdsgae pdatpadsds saedtrgade
       61 etdadqaapv deapsgeges daalpvteas gedsasaeet ppaddvaaea gvsgsgtasa
      121 avptpaedaa taddavpadd agtsedsapa qdmapaqdma paddsapaed aapaedsgpv
      181 addrseaddd aftgeadeaa adeapepvye adavlagsld varaalaeia pegtigelvt
      241 tlaqgehvvs lqfanlmrgy pgwlwtatls ridenedvnv levellpgeg avlapdwvpw
      301 svrladyqta qdalgeeved adddeledae endlddesdd dsdedevdsd ddddpvdddd
      361 seddsdddds ddedsdedds ddpdddsdde dsddvepepa papttrrrrr rr
//
LOCUS       WP_258065408             425 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rathayibacter sp. AY1B8].
ACCESSION   WP_258065408
VERSION     WP_258065408.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1B8
  ORGANISM  Rathayibacter sp. AY1B8
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Rathayibacter sp. AY1B8"
                     /db_xref="taxon:2080533"
     Protein         1..425
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=42563
     Region          19..414
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(25..26,29..30,33,65,115..116,118..120,123,143,
                     146..147,150,244,247..248,251..253,256,283,287,340..341,
                     345,349,365,368..369,372..373,376)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mtstaprpfp vgplllstfl ptllfsigeg aiipllpaaa gdlgatlala glvagmimig
       61 elagdipsgw ivsrigerga mlgasaasil glvvcllsts wvgltigvfv iglatavfal
      121 arhafmtsfv pithrarals alagafragw ligpflaagv vhltgsvesv fwvhivccva
      181 avvvlllvpd patvlrraqa aadraapedv vaaeasatvp espqsllgtl rehrgvlarm
      241 gtgaavigal rasrtlilpl wavsiglaet dtaiiigiag aldfalfyag gqlmdrfgrg
      301 ataipsmigl glghlalags vlaldpvpwf vavacvlaaa ngigsgilmt igadlappad
      361 papflgafrf tgdagnaaap ivvsaltali slpfaavvmg vlglggagal arwiprylpr
      421 aasrg
//
LOCUS       WP_258065419             963 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Rathayibacter sp. AY1B8].
ACCESSION   WP_258065419
VERSION     WP_258065419.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1B8
  ORGANISM  Rathayibacter sp. AY1B8
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 963)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Rathayibacter sp. AY1B8"
                     /db_xref="taxon:2080533"
     Protein         1..963
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=101463
     Region          46..340
                     /region_name="GH43_FsAxh1-like"
                     /note="Glycosyl hydrolase family 43 such as Fibrobacter
                     succinogenes subsp. succinogenes S85 arabinoxylan
                     alpha-L-arabinofuranosidase; cd09001"
                     /db_xref="CDD:350115"
     Site            order(58,83,130..131,176..177,235,294..295,315,317,323)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:350115"
     Region          407..533
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; pfam02018"
                     /db_xref="CDD:396553"
     Region          571..787
                     /region_name="GH43_C2"
                     /note="Beta xylosidase C-terminal Concanavalin A-like
                     domain; pfam17851"
                     /db_xref="CDD:436093"
ORIGIN      
        1 mravastaig allaagllas gaapataaga wspkasytst drgdgtysvp llnadvpdvs
       61 vervpasend egrdiyymis ttmhlspgap imksydlvnw eivnyvfdrl eigdrfslrn
      121 gqnsygngqw asslryhdgr yyavfntnnl ggsylystdd iedgawtrta lgrafhdpsl
      181 ffddadggtp yifygsgsts avklsedltt vvaeypnilr tsdypgagyl gglfegaqvq
      241 yidgqyyivi itwpsgqgrq valfrssell gryatadgsn pyegkgvlns sgfaqgslvp
      301 iakedgstaw hgmffrdsfp tgripglipa twkdgwptfg tngsvpvggs fpkpirlspe
      361 eelferqksi vvsddfdnda pakayqdesw tippapayda sllgvqllqn pgaesgtapw
      421 agqfgatlsa dttdpasgta alrvgtrtln gsgpsqvlan klqrgvtytv sakvkyttgp
      481 asvrfnlcad fgagpvtmas aavtqgqwtt itgtytvpet anvgsvkfav etpwgnpqpa
      541 sssteylldd vslvgaaptl erptaaeiep ngstlalpwq wnhapdnryw slteregwlr
      601 ltngkvlsgt aahtrlsgsp emtyleearn tlsqrivapk qsaeaafdvs gmkdgdvagl
      661 aaynrgfsyv avkrvdgvtt vgvvnrsqpf attfdqaave sflpgttaal gdasqvrlka
      721 dlelsapagq lwttfsysld gtswtklgsr vgpqtldgql thfmghrlgl fsyatktagg
      781 hvdvdeflls dtlssegkal drsqldaava haatlrsddy padawsdlqs vlakaqavgt
      841 agtqnqidap eralsyqlar lgtlkeasld vtaaaatrci agkvvvtvra tnaddvpval
      901 rmesasgtkt vaalapgatt shafttraas vpaaevvvta tatldgepvt ttvraphpaa
      961 scg
//
LOCUS       WP_258065468             232 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Rathayibacter sp. AY1B8].
ACCESSION   WP_258065468
VERSION     WP_258065468.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1B8
  ORGANISM  Rathayibacter sp. AY1B8
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Rathayibacter sp. AY1B8"
                     /db_xref="taxon:2080533"
     Protein         1..232
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=24682
     Region          <3..229
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mflvttvhgf sgpeilpayr ealrhprtah lvsisdsdrs peldyaatvh hgidvngfpa
       61 gsggedlvil grihpdkgta eavriaaaag rrlllcgivq derywreeve plvdgtrvvy
      121 rgsvgpeera lvlggalall hpigfdepfg lsvveamacg tpviayrrgs maeiidegvt
      181 gfavgsaaea vaavervgll draavretar rrfavdrmvd eylavyagvl gr
//
LOCUS       WP_258065478             318 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF998 domain-containing protein [Rathayibacter sp. AY1B8].
ACCESSION   WP_258065478
VERSION     WP_258065478.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1B8
  ORGANISM  Rathayibacter sp. AY1B8
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017959.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06197.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Rathayibacter sp. AY1B8"
                     /db_xref="taxon:2080533"
     Protein         1..318
                     /product="DUF998 domain-containing protein"
                     /calculated_mol_wt=32890
     Region          3..212
                     /region_name="DUF998"
                     /note="Protein of unknown function (DUF998); cl21592"
                     /db_xref="CDD:473918"
     Region          <207..311
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mgtrgagvlw vvsalayvga eavaasafpg ysyarnyisd lgvpevgvfq graidsplha
       61 vmnagfllqg alylaaavtt vraarggsrg lflslavvya vgiavvglvh gssasaqngi
      121 gglhvvgaam aivggnaasi vagaaarrgr apwalgtvgi vlgavgllal lmlqvdtrvp
      181 gvdllpdgvw erasvyavta wqlatglrll rrpevprqpr ppqtagsgaq vrsavhrlfq
      241 lgiripeals vvvfddnpws elvtpplsvv rqpidmlarh svelvlarmq grlpeapqhi
      301 evqadlvirs scaapprr
//
LOCUS       WP_258065572             900 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Rathayibacter tritici].
ACCESSION   WP_258065572
VERSION     WP_258065572.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter tritici
  ORGANISM  Rathayibacter tritici
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 900)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Rathayibacter tritici"
                     /db_xref="taxon:33888"
     Protein         1..900
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=92825
     Region          66..324
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     Region          351..894
                     /region_name="PRK09274"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:236443"
ORIGIN      
        1 mtgahpaeri rgalgataaa qlpptgldgl dpewsrlvda pdaqgvsrrw hlldtgdalg
       61 vepvgtilcv hgnptwsylw rrlaaatlea arggrpawrv vavdqlemgf sertgalhpl
      121 adrvrelsnl tdvlglddvv tlghdwggvv slgwavdhpe llratmllnt avhqsadapi
      181 paplrlalas gvlgastvgt paflettlal ghpallsavk egyrapyrsa srrggvggfv
      241 adipvdsahp sdpelqriae gvraltapal mlwgpldpif sdrylddlvd rlphaqvhrf
      301 egaghllaed vdyasavltw lgdladgdep fggnpapdvr rpsapveslw ahldrnaedd
      361 slalvemapp ggggprsvsw rllsrrvrel aaglrasgva pgdrvsllvp pgadltally
      421 aclrigavvv vadaglglrg ltravrgawp dlvvgalpgl tvaralrwpg grvstqtlpr
      481 asaaalgvdt slgqlielgr aelaadpaal geapaadava ailftsgstg pakgvvythr
      541 qlagvrdala rqygigpgtg lvagfapfal lgpalgtrsa tpdmdvtapr tltatavaaa
      601 aarvdatvlf lspaaltnvv ataealgadd hralagvrtf lsagapvsag llgeaqalmp
      661 nasartpygm teallltdaa legireaasd ddprggvcvg vpaagvrlri apldadgraa
      721 depveivgvt geivvsaghv edhyerlwlt draarigava gerwhrtgdv gridsagrlw
      781 vegrmphvvv tpegvvtpvg peqriesrvg svaraavvga gprgvaqlva vvelrsgaqr
      841 valaeealaa evrsavgrrv aavlvvpalp tdirhnskid raalsrwaeg vlaggrmvap
//
LOCUS       WP_258065642             985 aa            linear   BCT 02-MAR-2025
DEFINITION  immunoglobulin-like domain-containing protein [Rathayibacter sp.
            AY1D1].
ACCESSION   WP_258065642
VERSION     WP_258065642.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D1
  ORGANISM  Rathayibacter sp. AY1D1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042837.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20578.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Rathayibacter sp. AY1D1"
                     /db_xref="taxon:2080542"
     Protein         1..985
                     /product="immunoglobulin-like domain-containing protein"
                     /calculated_mol_wt=101268
     Region          <186..252
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          279..348
                     /region_name="aBig_2"
                     /note="Atrophied bacterial Ig domain; pfam20578"
                     /db_xref="CDD:466727"
     Region          361..451
                     /region_name="aBig_2"
                     /note="Atrophied bacterial Ig domain; pfam20578"
                     /db_xref="CDD:466727"
     Region          488..803
                     /region_name="GH43_Bt3655-like"
                     /note="Glycosyl hydrolase family 43 protein such as
                     Bacteroides thetaiotaomicron VPI-5482 arabinofuranosidase
                     Bt3655; cd08983"
                     /db_xref="CDD:350097"
ORIGIN      
        1 mrslflsala ctsvaltgal vpvsaqavdv paptahydms hagsalldis gngrnatltg
       61 ltdasfanag gdqvarfknd gyaslpqglv tgadnafave ytvktqttan qfgwvigdgv
      121 gpwnttqlgn hvfvnprnpd gspsgqvlag irvkeptnng etrmpfggtl npgfttltlv
      181 gtgtgsstvl tlyrdgtqis tanttksmas ivptgstlgy lgrslysgda lvtadvtdvk
      241 fwdtsltaeq vassmptata kasatsallr sdiqpvllag npsltqvssn ltlpasssgv
      301 pltwtssnsa vvsatgvvsr siaqntpvtl tattaqgati afevvvlaps inddldalkl
      361 atrttenlpl avkgarngtd itwtssdpal vtptntsyaa pavgaadpyr gggvvtrpay
      421 gsgdrtvtlt atatlngvae traftltvae lgrtapdagy asayfksdgd ekiyqaatsg
      481 ndfftfspvn ggkavitstt dtkglrdpfi lrshngdkyy mvatdlcisc gtgwgdaqsk
      541 gslkievwes tdlvqwtrtn gadtgitvnq paagmtwape aywddalqsy vvffssrlys
      601 datktnndkl ysrvfsvitr dfrtftappa twqdtgyari dstitkigdy yyrftkneeg
      661 gaagtleagk diflekskvl tagttssnws adpnttwqlt dtrmtsletg qagegpeiik
      721 lnagdpndtt gagdgyaflv dnygdggyka fitsgaaiag ssqtnrlsqs adwnvspksr
      781 aglpasprhg afvsvpqtvl tamknwtgvt avdstttlta dgrtvtatva aadrgdvvgs
      841 vtftggswts tvplsggsas vsvpagvtgv tasytgyadk lvrtsvsaav pldtlelvpa
      901 vatrcvagki vltatvkntd taaadvtits aygsksftai apgssasaaf ttrlasmpag
      961 tvtvtgsatg qpaftatvpv aaarc
//
LOCUS       WP_258065687             229 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Rathayibacter sp. AY1D1].
ACCESSION   WP_258065687
VERSION     WP_258065687.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D1
  ORGANISM  Rathayibacter sp. AY1D1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Rathayibacter sp. AY1D1"
                     /db_xref="taxon:2080542"
     Protein         1..229
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=24599
     Region          <1..226
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mttvhgfsgp eilpayreal rhprtehlvs isdsdrspel dyaatvhhgi dvdgfpagsg
       61 gedlvilgri hpdkgtaeav riaaaagrrl vicgivqder ywreeveplv dgtrvvyrgs
      121 vgpeeralvl ggalallhpi gfdepfglsv veamacgtpv iayrrgsmae iidegvtgfa
      181 vssreeavaa vervglldra avretarrrf aedrmvdeyl vvyagvlgr
//
LOCUS       WP_258065693             318 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF998 domain-containing protein [Rathayibacter sp. AY1D1].
ACCESSION   WP_258065693
VERSION     WP_258065693.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D1
  ORGANISM  Rathayibacter sp. AY1D1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017959.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06197.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Rathayibacter sp. AY1D1"
                     /db_xref="taxon:2080542"
     Protein         1..318
                     /product="DUF998 domain-containing protein"
                     /calculated_mol_wt=32776
     Region          3..212
                     /region_name="DUF998"
                     /note="Protein of unknown function (DUF998); cl21592"
                     /db_xref="CDD:473918"
     Region          <217..311
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mgtrgagvlw vvsalayvga eavaasafpg ysyarnyisd lgvpevgvfq graidsplha
       61 vmnagfllqg alylaaavtt vraarggsrg lflplavvya vgiavvglvh gssasaqngi
      121 gglhvvgaam aivggnaasi vagaaarrgr apwaletvgi vlgaagllal lmlqvdtrvp
      181 gvdllpdgvw erasvyavta wqlatglgll rrpevprqpr ppqtagsgaq vrsavhrlfq
      241 lgiripeals vvvfddnpws elvtpplsvv rqpidmlarh svelvlarmq grlpeapqhi
      301 evqadlviss scaapprr
//
LOCUS       WP_258065710             128 aa            linear   BCT 02-MAR-2025
DEFINITION  PspC domain-containing protein, partial [Rathayibacter sp. AY1D1].
ACCESSION   WP_258065710
VERSION     WP_258065710.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D1
  ORGANISM  Rathayibacter sp. AY1D1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 128)
  AUTHORS   Brissette,J.L., Weiner,L., Ripmaster,T.L. and Model,P.
  TITLE     Characterization and sequence of the Escherichia coli
            stress-induced psp operon
  JOURNAL   J Mol Biol 220 (1), 35-48 (1991)
   PUBMED   1712397
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015957.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04024.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Rathayibacter sp. AY1D1"
                     /db_xref="taxon:2080542"
     Protein         1..>128
                     /product="PspC domain-containing protein"
ORIGIN      
        1 mstvpgtavr pplqrprtml lggvctavad hlgwsvrrtr llavlttalg gggallylwl
       61 walvplaple srdadpavrr sapvaglltl aaavaalavl itvdsgddad itralvavgl
      121 laggavgw
//
LOCUS       WP_258065739             258 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Rathayibacter sp.
            AY2B5].
ACCESSION   WP_258065739
VERSION     WP_258065739.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY2B5
  ORGANISM  Rathayibacter sp. AY2B5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 258)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 258)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Rathayibacter sp. AY2B5"
                     /db_xref="taxon:2080570"
     Protein         1..258
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=26757
     Region          5..249
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(9,11..12,14,33..35,80..82,136..138,151,155,181..184)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(105,138,151,155)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mdrrvvvtga ssgigaaavr lfrehgwkvv avarrrdrle alaaetgagy faadltdaaq
       61 vdalrdhlss sgpvhalvnn aggalgldsv eksdpedwrr mfeinvlsvk lvtsallpll
      121 ragirgsgts adivtvtsia ghvayegggg ynaakhaaha lvavlrlela gepirvieia
      181 pgmvhtdefs lvrfggdrer adavyaevpd plvaedvaaa ivssvelpah vnldlvtvkp
      241 vaqaaphkva kgplapra
//
LOCUS       WP_258065791             313 aa            linear   BCT 02-MAR-2025
DEFINITION  asparaginase domain-containing protein [Pseudoclavibacter sp.
            RFBA6].
ACCESSION   WP_258065791
VERSION     WP_258065791.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. RFBA6
  ORGANISM  Pseudoclavibacter sp. RFBA6
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012913.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00710.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Pseudoclavibacter sp. RFBA6"
                     /db_xref="taxon:2080573"
     Protein         1..313
                     /product="asparaginase domain-containing protein"
                     /EC_number="3.5.1.1"
                     /calculated_mol_wt=31294
     Region          8..291
                     /region_name="L-asparaginase_like"
                     /note="Bacterial L-asparaginases and related enzymes;
                     cl00216"
                     /db_xref="CDD:469665"
     Site            order(17..18,59..60,91..93,117,165)
                     /site_type="active"
                     /db_xref="CDD:199205"
     Site            order(58,60..64,67,93..94,97,118,165..169,196..198,
                     200..202,206,208..209,212..213,216,224,226..228,230,232,
                     253,258..259,286..287,290)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:199205"
ORIGIN      
        1 mtttaplpli aviatggtia stttasgatt pslgadalla gadapgarlr pvnlmavdss
       61 sltlgemqsi sdevrrqved devsavivlh gtdsmeessl ltdlqlkssk pviftgsqft
      121 aeseapdgpa nvaaalaaal dpanrgrgvl vafggrllka wgltkasadr adafrsvtdr
      181 parrlhlpap vtgmrvdtva vmpggdathl hasleagvqg ivlvglgsgn asqsivsaaw
      241 ecqasdiplv vssrvpfgvl kasygggggg hdlavvgaih aavlragqar illaallane
      301 atgeeiaaaf aae
//
LOCUS       WP_258065811             280 aa            linear   BCT 02-MAR-2025
DEFINITION  ROK family protein [Rathayibacter sp. AY2B5].
ACCESSION   WP_258065811
VERSION     WP_258065811.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY2B5
  ORGANISM  Rathayibacter sp. AY2B5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Rathayibacter sp. AY2B5"
                     /db_xref="taxon:2080570"
     Protein         1..280
                     /product="ROK family protein"
                     /calculated_mol_wt=29318
     Region          14..253
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mtqphdgllp rfavgvdigg tsikaslvdv ttgeraarrf avanplgkep edfaeaiagi
       61 vrdvspiagt pvgvgfpgiv rggvvrqtth vsqrwvglda qvllseatgv dvvvvndada
      121 agvaerefga mrgregllll ttlgtgigta lvhegvvipn selghlhidg pdfepkvgfs
      181 avrregitle ewagrlsvyy rhlemllspq lfviggaaah vfdefarfld igteivparf
      241 gndagftgaa mvavspdrla pwyrstrgar ldpgapaiad
//
LOCUS       WP_258065815             259 aa            linear   BCT 02-MAR-2025
DEFINITION  PHP domain-containing protein [Pseudoclavibacter sp. RFBA6].
ACCESSION   WP_258065815
VERSION     WP_258065815.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. RFBA6
  ORGANISM  Pseudoclavibacter sp. RFBA6
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
REFERENCE   1  (residues 1 to 259)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014826.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02811.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Pseudoclavibacter sp. RFBA6"
                     /db_xref="taxon:2080573"
     Protein         1..259
                     /product="PHP domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=26639
     Region          14..246
                     /region_name="HIS2"
                     /note="Histidinol phosphatase or related hydrolase of the
                     PHP family [Amino acid transport and metabolism, General
                     function prediction only]; COG1387"
                     /db_xref="CDD:440997"
ORIGIN      
        1 mtdgqavpgl ealllgdwhv hsdfsddaes piaanvraae qaglmamrat dhvrrdtawv
       61 pefvgavvaa rrrtgvelvi gveakildar gtldvpsdlr vggggvdgiv iadhqfpgpd
      121 gpwspretre rlaaglavdd aldlligati gamrvaggga qlahpfsilp kvgidesqls
      181 aehlsawasa aretgtsiev nekwgcpsvr aleavlaega tlvastdshr aadvgvyarv
      241 remlaevsaf gssdaggaa
//
LOCUS       WP_258065816             425 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rathayibacter sp. AY2B5].
ACCESSION   WP_258065816
VERSION     WP_258065816.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY2B5
  ORGANISM  Rathayibacter sp. AY2B5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Rathayibacter sp. AY2B5"
                     /db_xref="taxon:2080570"
     Protein         1..425
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=42563
     Region          19..414
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(25..26,29..30,33,65,115..116,118..120,123,143,
                     146..147,150,244,247..248,251..253,256,283,287,340..341,
                     345,349,365,368..369,372..373,376)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mtstaprpfp vgplllstfl ptllfsigeg aiipllpaaa gdlgatlala glvagmimig
       61 elagdipsgw ivsrigerga mlgasaasil glvvcllsts wvgltigvfv iglatavfal
      121 arhafmtsfv pithrarals alagafragw ligpflaagv vhltgsvesv fwvhivccva
      181 avvvlllvpd patvlrraqa aadraapedv vaaeasatvp espqsllgtl rehrgvlarm
      241 gtgaavigal rasrtlilpl wavsiglaet dtaivigiag aldfalfyag gqlmdrfgrg
      301 ataipsmigl glghlalaas vlaldpvpwf vavacvlaaa ngigsgilmt igadlappad
      361 papflgafrf tgdagnaaap ivvsaltali slpfaavvmg vlglggagal arwiprylpr
      421 aasrg
//
LOCUS       WP_258065844             156 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Rathayibacter sp.
            AY2B5].
ACCESSION   WP_258065844
VERSION     WP_258065844.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY2B5
  ORGANISM  Rathayibacter sp. AY2B5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Swint-Kruse,L. and Matthews,K.S.
  TITLE     Allostery in the LacI/GalR family: variations on a theme
  JOURNAL   Curr Opin Microbiol 12 (2), 129-137 (2009)
   PUBMED   19269243
REFERENCE   2  (residues 1 to 156)
  AUTHORS   Fukami-Kobayashi,K., Tateno,Y. and Nishikawa,K.
  TITLE     Parallel evolution of ligand specificity between LacI/GalR family
            repressors and periplasmic sugar-binding proteins
  JOURNAL   Mol Biol Evol 20 (2), 267-277 (2003)
   PUBMED   12598694
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13377.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Rathayibacter sp. AY2B5"
                     /db_xref="taxon:2080570"
     Protein         1..156
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=16648
     Region          <81..152
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 merrgqsprg gvrvraegse sarngqsqrg rerlddagra hvadplhpvg eereadsrvr
       61 vgegdlsara vvpeaarrea ayqvvaeagl sipgdiavvs fdddelaayl rpglttvalp
      121 heemgrrave lllsgapger vlvpmplver astrrv
//
LOCUS       WP_258065874             414 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Rathayibacter sp. AY1D5].
ACCESSION   WP_258065874
VERSION     WP_258065874.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D5
  ORGANISM  Rathayibacter sp. AY1D5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Rathayibacter sp. AY1D5"
                     /db_xref="taxon:2080546"
     Protein         1..414
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=44716
     Region          20..395
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 msdprdasrp gspdsrpltv vigcdtfapd vngaakfaer laaglaqrgh evhvvapsad
       61 gwsgtrveth egqriivhrl yswrwyphdw lrfampwrir qnsarildev kpdvvhfqsh
      121 iivgrglgie aakrgirivg tnhfmpenml eftllpkavq akavamawra arrtfgraea
      181 vttptrkaaq flekytglrg vhaiscgida dnytpdfsar agdsilfvgr vtgekhidvl
      241 lravalldpa ldakleivgg gdqmrnlqql aatlgiadrv rftgyvsdae lkeaytratv
      301 fampsiaelq siatmeamas alpvvaadam alphlvhdge ngylfapgsa ealadrltav
      361 ltadqedlea mkraslqiva ahdinrtist feslyrgepv adpvsdaasa paat
//
LOCUS       WP_258065903             424 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Pseudoclavibacter sp. RFBA6].
ACCESSION   WP_258065903
VERSION     WP_258065903.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. RFBA6
  ORGANISM  Pseudoclavibacter sp. RFBA6
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
REFERENCE   1  (residues 1 to 424)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 424)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 424)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 424)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Pseudoclavibacter sp. RFBA6"
                     /db_xref="taxon:2080573"
     Protein         1..424
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=44570
     Region          31..420
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mtslaalsva allascaggs gsagssagda vtlwgitsdq eetvdpsvad wnaahpdaql
       61 eatyfegeay kskirtaiga gagpsviynk gggtlqsyvd adkvvdlsda lgddldrflp
      121 faldpvtfdg avyavpmkav apvvlyvned vmdeagvepp etwdellvav eklnaagvap
      181 falagaakwp elmwleylad riggpevfda ilageagaws hpaiiqanem iqdlveaggf
      241 adgfasvttd ssadaallyt gkaamllqgt wvnntfreqa pefaesslgy lpfptveggt
      301 gdpanivgnp tsyfsvsada teaqqavaid ylktglwdep fvdrlieanq vppladiddt
      361 iadlpdaafg etvyqmisda pnfqmswdqa lepgqaqeml tnldrlfnlq itpeefstnm
      421 natl
//
LOCUS       WP_258065945             126 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Rathayibacter sp. AY2B5].
ACCESSION   WP_258065945
VERSION     WP_258065945.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY2B5
  ORGANISM  Rathayibacter sp. AY2B5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Rathayibacter sp. AY2B5"
                     /db_xref="taxon:2080570"
     Protein         1..126
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=13647
     Region          48..>125
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mtgergtrla delrewdaga ladlrdeyla fleqrgepal erdggpehvt ascfvlspnl
       61 aqvllcfhrk grfwvqlggh vepgddstad aalrearees gaarlqplgv lpldldrhal
      121 gdgfgr
//
LOCUS       WP_258065958             357 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: restriction endonuclease [unclassified
            Rathayibacter].
ACCESSION   WP_258065958
VERSION     WP_258065958.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 357)
  AUTHORS   Bujnicki,J.M. and Rychlewski,L.
  TITLE     Identification of a PD-(D/E)XK-like domain with a novel
            configuration of the endonuclease active site in the
            methyl-directed restriction enzyme Mrr and its homologs
  JOURNAL   Gene 267 (2), 183-191 (2001)
   PUBMED   11313145
REFERENCE   2  (residues 1 to 357)
  AUTHORS   Waite-Rees,P.A., Keating,C.J., Moran,L.S., Slatko,B.E.,
            Hornstra,L.J. and Benner,J.S.
  TITLE     Characterization and expression of the Escherichia coli Mrr
            restriction system
  JOURNAL   J Bacteriol 173 (16), 5207-5219 (1991)
   PUBMED   1650347
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016362.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04471.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..357
                     /product="restriction endonuclease"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_process="GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /calculated_mol_wt=38655
     Region          2..179
                     /region_name="COG4127"
                     /note="Predicted restriction endonuclease, Mrr-cat
                     superfamily [General function prediction only]"
                     /db_xref="CDD:443303"
     Region          212..328
                     /region_name="Mrr_cat"
                     /note="Restriction endonuclease; pfam04471"
                     /db_xref="CDD:461322"
ORIGIN      
        1 mtawvvraga sgerdswtle ksiagggfhe vedlshltlr gqiaasveag fprdsqpgrl
       61 anytgqllal rtliepgdiv vtplkstkri aigvctrgys fdadepdptr rhtigvewrn
      121 seisrgslkd dllntvngam tifratknna earlrsvmqt gvdpgsgpis apqssavsag
      181 mderrstved vtdprsvptl qairdrvrth lienfgghkl shlvgdllra egytcdvspe
      241 gpdfgvdiia grgplgldsp tlivevksea gqigapvvrg lqgamasnka dqgllvawgg
      301 lnrqartair tdrltirvwd sedlldrlfm vyerlpettr sripltrtwi ldedids
//
LOCUS       WP_258065994             403 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Rathayibacter sp. AY2B5].
ACCESSION   WP_258065994
VERSION     WP_258065994.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY2B5
  ORGANISM  Rathayibacter sp. AY2B5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 403)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012417.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00190.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Rathayibacter sp. AY2B5"
                     /db_xref="taxon:2080570"
     Protein         1..403
                     /product="cupin domain-containing protein"
                     /GO_function="GO:0045735 - nutrient reservoir activity
                     [Evidence IEA]"
                     /calculated_mol_wt=44239
     Region          32..393
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     Site            order(87,97..98,100,102,119,121,123,125,150,152,172,174,
                     176,202)
                     /site_type="other"
                     /note="intramolecular domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:380438"
     Site            order(103,111,114,116,120,159,173,175)
                     /site_type="active"
                     /db_xref="CDD:380438"
ORIGIN      
        1 mepddstaph hetpgfgdpd lpqegivnte adpsantmtg pqnrvleglf pnqiaapatd
       61 istqpffwss fnisprrvqr ggwareltqa dfaisneiag vnmyleaggi relhwhqsae
      121 walmtkgncr ittlsrtgrp svddvqegdl wyfppglphs lqglgpdgae fvlafddgeq
      181 sesntllltd wfahtppdvl aknfgvaqev frdiplhdlw ifpgdvpgdl qadraaagvq
      241 dgdeavifrl srsepayqns ggriqiadst nfpasrtvsa alttvepgsm relhwhpnad
      301 ewqyylrgsa rmtvfntgph anttdfhagd vgvvrrnfgh yventgddtl vyietfkssr
      361 yeevslaqwl shlppslvaq hlnipeevla tfppgtqgit plr
//
LOCUS       WP_258066058             461 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Rathayibacter sp.
            AY1D5].
ACCESSION   WP_258066058
VERSION     WP_258066058.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D5
  ORGANISM  Rathayibacter sp. AY1D5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Rathayibacter sp. AY1D5"
                     /db_xref="taxon:2080546"
     Protein         1..461
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=49211
     Region          2..443
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mpdlaasaef tdpthyrval redaafangn pltasdvvft ferqvaiaap ngpssllsdm
       61 vsvaaeddst vvftlatpdn alwpqiltsp aaaivdedvf sadslttddd ivagdafsgq
      121 ysitsytlns lvqltrndsy dgllgaaane svivryyade snlkldiqrg eiavayrtln
      181 atdtedlrge egltvhsgpg aemrflvfnp etmpygsats eadadkalav rtavadlidr
      241 delsdqvykg tyapvysivp saltgstpay eqafgdgsgg psadeaaaal raagitgpvd
      301 lklqyntdhy gsstsdeyal iknqlersgl ftvdlqstew tqyvkeksts yplyqqgwfa
      361 dypdsdnyln llygtdeaps ilgaavkdda ynevvlrers lapgdertaa ieeaqrlaae
      421 kaitvplleg tetviassti sgiddtldgs grfrfgllrs e
//
LOCUS       WP_258066059             963 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Rathayibacter sp. AY1D5].
ACCESSION   WP_258066059
VERSION     WP_258066059.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D5
  ORGANISM  Rathayibacter sp. AY1D5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 963)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Rathayibacter sp. AY1D5"
                     /db_xref="taxon:2080546"
     Protein         1..963
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=101449
     Region          46..340
                     /region_name="GH43_FsAxh1-like"
                     /note="Glycosyl hydrolase family 43 such as Fibrobacter
                     succinogenes subsp. succinogenes S85 arabinoxylan
                     alpha-L-arabinofuranosidase; cd09001"
                     /db_xref="CDD:350115"
     Site            order(58,83,130..131,176..177,235,294..295,315,317,323)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:350115"
     Region          407..533
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; pfam02018"
                     /db_xref="CDD:396553"
     Region          571..787
                     /region_name="GH43_C2"
                     /note="Beta xylosidase C-terminal Concanavalin A-like
                     domain; pfam17851"
                     /db_xref="CDD:436093"
ORIGIN      
        1 mravastaig allaagllas gaapataaga wspkasytst drgdgtysvp llnadvpdvs
       61 vervpasend egrdiyymis ttmhlspgap imksydlvnw eivnyvfdrl eigdrfslrn
      121 gqnsygngqw asslryhdgr yyavfntnnl ggsylystdd iedgawtrta lgrafhdpsl
      181 ffddadggtp yifygsgsts avklsedltt vvaeypnilr tsdypgagyl gglfegaqvq
      241 yidgqyyivi itwpsgqgrq valfrssell gryatadgsn pyegkgvlns sgfaqgslvp
      301 iakedgstaw hgmffrdsfp tgripglipa twkdgwptfg tngsvpvggs fpkpirlspe
      361 eelferqkgi vvsddfdnda pakayqdesw tippapayda sllgvqllqn pgaesgtapw
      421 agqfgatlsa dttdpasgta alrvgtrtln gsgpsqvlan klqrgvtytv sakvkyttgp
      481 asvrfnlcad fgagpvtmas aavtqgqwtt itgtytvpet anvgsvkfav etpwgnpqpa
      541 sssteylldd vslvgaaptl erptaaeiep ngstlalpwq wnhapdnryw slteregwlr
      601 ltngkvlsgt aahtrlsgsp emtyleearn tlsqrivapk qsaeaafdvs gmkdgdvagl
      661 aaynrgfsyv avkrvdgvtt vgvvnrsqpf attfdqaave sflpgttaal gdasqvrlka
      721 dlelsapagq lwttfsysld gtswtklgsr vgpqtldgql thfmghrlgl fsyatktagg
      781 hvdvdeflls dtlssegkal drsqldaava haatlrsddy padawsdlqs vlakaqsvgt
      841 agtqnqidap eralsyqlar lgtlkeasld vtaaaatrci agkvvvtvra tnaddvpval
      901 rmesasgtkt vaalapgatt shafttraas vpaaevvvta tatldgepvt ttvraphpaa
      961 scg
//
LOCUS       WP_258065482             258 aa            linear   BCT 02-MAR-2025
DEFINITION  Ltp family lipoprotein [Rathayibacter sp. AY1B8].
ACCESSION   WP_258065482
VERSION     WP_258065482.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1B8
  ORGANISM  Rathayibacter sp. AY1B8
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 258)
  AUTHORS   Bebeacua,C., Lorenzo Fajardo,J.C., Blangy,S., Spinelli,S.,
            Bollmann,S., Neve,H., Cambillau,C. and Heller,K.J.
  TITLE     X-ray structure of a superinfection exclusion lipoprotein from
            phage TP-J34 and identification of the tape measure protein as its
            target
  JOURNAL   Mol Microbiol 89 (1), 152-165 (2013)
   PUBMED   23692331
REFERENCE   2  (residues 1 to 258)
  AUTHORS   Neve,H., Zenz,K.I., Desiere,F., Koch,A., Heller,K.J. and Brussow,H.
  TITLE     Comparison of the lysogeny modules from the temperate Streptococcus
            thermophilus bacteriophages TP-J34 and Sfi21: implications for the
            modular theory of phage evolution
  JOURNAL   Virology 241 (1), 61-72 (1998)
   PUBMED   9454717
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019191.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07553.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Rathayibacter sp. AY1B8"
                     /db_xref="taxon:2080533"
     Protein         1..258
                     /product="Ltp family lipoprotein"
                     /calculated_mol_wt=26093
     Region          2..84
                     /region_name="YqfX"
                     /note="Uncharacterized sporulation protein YqfX, contains
                     DUF308 domain [Cell cycle control, cell division,
                     chromosome partitioning]; COG5921"
                     /db_xref="CDD:444622"
     Region          92..>164
                     /region_name="kgd"
                     /note="multifunctional oxoglutarate
                     decarboxylase/oxoglutarate dehydrogenase thiamine
                     pyrophosphate-binding subunit/dihydrolipoyllysine-residue
                     succinyltransferase subunit; cl39092"
                     /db_xref="CDD:476867"
     Region          160..206
                     /region_name="Lipoprotein_Ltp"
                     /note="Host cell surface-exposed lipoprotein; pfam07553"
                     /db_xref="CDD:462206"
     Region          209..256
                     /region_name="Lipoprotein_Ltp"
                     /note="Host cell surface-exposed lipoprotein; pfam07553"
                     /db_xref="CDD:462206"
ORIGIN      
        1 mprttaaipt sapktgpagl aiaalvvgiv aflvglvpvf galvgiaavv lgilalrrgq
       61 skamsitgvv lgglavlasl lttigfgaav nsassdrpaa vivesseptt apvvpateea
      121 evvetaepap vetaepapve tvapapapve taaaaqvspe fasalikaqs ysemlhmska
      181 glygqltsey geqfspeaaq yavdtvsadw nanalakakd yqaqmamape airdqltsey
      241 geqftsdead yaiahlnd
//
LOCUS       WP_258066108             520 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Rathayibacter sp. AY1D5].
ACCESSION   WP_258066108
VERSION     WP_258066108.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D5
  ORGANISM  Rathayibacter sp. AY1D5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 520)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 520)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012234.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00004.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Rathayibacter sp. AY1D5"
                     /db_xref="taxon:2080546"
     Protein         1..520
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=53064
     Region          211..472
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            262..269
                     /site_type="other"
                     /note="Walker A motif"
                     /db_xref="CDD:99707"
     Site            order(263..270,325,361)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:99707"
     Site            321..326
                     /site_type="other"
                     /note="Walker B motif"
                     /db_xref="CDD:99707"
     Site            378
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:99707"
     Region          <467..>520
                     /region_name="PHA03169"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:223003"
ORIGIN      
        1 mtalapalda lvlagtaagl daaavrdega rlaaavaesi rgagqdwlaa tgatggleaf
       61 ftaassgrrw rsgptdqlaa lvgagshhss ayaraltevv saasalgdpg iggiasasat
      121 aaaqlsavpg argaapttsg gvphttgrtp dgaasadlpt glpagvpgvd eilerlrrte
      181 hdgpqdepap aaapaaepas epepldppes iddllaelda ligldrvkse ikrqtqllri
      241 dtlrqaagls tptltrhlvf tgnpgtgktt varlvsriyr slgilskgvl vevdrselva
      301 gylgqtatkt aeviasargg vlfideayal aldqygaeav ttlvkdmedh rgdlvvivag
      361 ysgpmqgfld tnpglasrfs ttidfadysd delsaifgrl aasadfepte ealaafagla
      421 saqqrteafg ngrwvrnvld aaiarhawrl rdveeptlde lrillpedvv espeassspd
      481 gaggddegav dgseeafgqa daapsgtavp vtddpeeesr
//
LOCUS       WP_258066128             425 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rathayibacter sp. AY1D5].
ACCESSION   WP_258066128
VERSION     WP_258066128.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D5
  ORGANISM  Rathayibacter sp. AY1D5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Rathayibacter sp. AY1D5"
                     /db_xref="taxon:2080546"
     Protein         1..425
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=42581
     Region          19..414
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(25..26,29..30,33,65,115..116,118..120,123,143,
                     146..147,150,244,247..248,251..253,256,283,287,340..341,
                     345,349,365,368..369,372..373,376)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mtstaprpfp vgplllstfl ptllfsigeg aiipllpaaa gdlgatlala glvagmimig
       61 elagdipsgw ivsrigerga mlgasaasil glvacllsts wvgltigvfv iglatavfal
      121 arhafmtsfv pithrarals alagafragw ligpflaagv vhltgsvesv fwvhivccva
      181 avvvlllvpd patvlrraqa aadraapedv vaaeasatvp espqsllgtl rehrgvlarm
      241 gtgaavigal rasrtlilpl wavsiglaet dtaiiigiag aldfalfyag gqlmdrfgrg
      301 ataipsmigl glghlalaas vlaldpmpwf vavacvlaaa ngigsgilmt igadlappad
      361 papflgafrf tgdagnaaap ivvsaltali slpfaavvmg vlglggagal arwiprylpr
      421 aasrg
//
LOCUS       WP_258066130             311 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Rathayibacter
            sp. AY1D5].
ACCESSION   WP_258066130
VERSION     WP_258066130.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D5
  ORGANISM  Rathayibacter sp. AY1D5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 311)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Rathayibacter sp. AY1D5"
                     /db_xref="taxon:2080546"
     Protein         1..311
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=32212
     Region          2..231
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(3,5..6,8,27..29,54..55,85..87,115,119,138..141)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(66,87,115,119)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mlggtgwlgg hlaaealrrg hdvtclargt avpagvslvr adrdredald avaaaswdav
       61 idvsstpqhv rrsvrdlrcs ayvlvsttsv yaenavvgad edaelltpsd dpasygaaka
      121 aceqavlags apsliaragl iggpgdptsr ssywpwrfsa rsgpvlvpda pelptsvvdv
      181 rdlaawlvas aearvagvmn vcgtpvpfge hlaaarsgss aepvavpqew llergvgqwa
      241 gagslplwia dpdwrgmnar staraeaagf errelaetlr daaaahvpgr gaglgeerer
      301 ellgewgagr d
//
LOCUS       WP_258066148             106 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP cone domain-containing protein, partial [Rathayibacter sp.
            AY1D5].
ACCESSION   WP_258066148
VERSION     WP_258066148.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D5
  ORGANISM  Rathayibacter sp. AY1D5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 106)
  AUTHORS   Aravind,L., Wolf,Y.I. and Koonin,E.V.
  TITLE     The ATP-cone: an evolutionarily mobile, ATP-binding regulatory
            domain
  JOURNAL   J Mol Microbiol Biotechnol 2 (2), 191-194 (2000)
   PUBMED   10939243
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03477.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Rathayibacter sp. AY1D5"
                     /db_xref="taxon:2080546"
     Protein         <1..106
                     /product="ATP cone domain-containing protein"
     Region          <1..96
                     /region_name="NrdR"
                     /note="Transcriptional regulator NrdR, contains Zn-ribbon
                     and ATP-cone domains [Transcription]; COG1327"
                     /db_xref="CDD:440938"
ORIGIN      
        1 gvvepfsrek ivsgvrkacq grpvtdtdla vlaqrveesi rstgasqida ndiglailpp
       61 lreldevayl rfasvyqafd slddfesait llraertsvp hsadei
//
LOCUS       WP_258066142              50 aa            linear   BCT 02-MAR-2025
DEFINITION  signal peptidase II [Rathayibacter sp. AY1D5].
ACCESSION   WP_258066142
VERSION     WP_258066142.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D5
  ORGANISM  Rathayibacter sp. AY1D5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013421.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01252.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..50
                     /organism="Rathayibacter sp. AY1D5"
                     /db_xref="taxon:2080546"
     Protein         1..50
                     /product="signal peptidase II"
                     /EC_number="3.4.23.36"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=5246
     Region          <3..39
                     /region_name="LspA"
                     /note="Lipoprotein signal peptidase [Cell
                     wall/membrane/envelope biogenesis, Intracellular
                     trafficking, secretion, and vesicular transport]; COG0597"
                     /db_xref="CDD:440362"
ORIGIN      
        1 mggevvdfia vdwfaifnva difttcgiag wallqvfgra dapqpqtset
//
LOCUS       WP_258065937             305 aa            linear   BCT 02-MAR-2025
DEFINITION  PAS domain-containing protein [Rathayibacter sp. AY1D5].
ACCESSION   WP_258065937
VERSION     WP_258065937.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D5
  ORGANISM  Rathayibacter sp. AY1D5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 305)
  AUTHORS   Taylor,B.L. and Zhulin,I.B.
  TITLE     PAS domains: internal sensors of oxygen, redox potential, and light
  JOURNAL   Microbiol Mol Biol Rev 63 (2), 479-506 (1999)
   PUBMED   10357859
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024586.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13188.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Rathayibacter sp. AY1D5"
                     /db_xref="taxon:2080546"
     Protein         1..305
                     /product="PAS domain-containing protein"
                     /calculated_mol_wt=31400
     Region          20..>263
                     /region_name="PRK11086"
                     /note="sensory histidine kinase DcuS; Provisional"
                     /db_xref="CDD:236839"
ORIGIN      
        1 mrfathvlvl qlatvsaavl vcaglvtals vqqlrgeaeg talaiartva edpdlrdafa
       61 assavsgahd asdlrggrle dvaaaveqrt galfvvitdd qgirlahpde drlgervsts
      121 pdealagres vswgtgtlge sarakvpvfa egeqrvvgev sigfarssvf tdlptallgv
      181 laaalaglvl aavasvfirr rllrltlgla peeltslvqd qaavldgvde gvlaldrdgr
      241 vgvcnaraaa ilgsddptgr alhrrplael dlpvpladai gaalhsvepp rpggeegfvv
      301 rsriv
//
LOCUS       WP_258066284             115 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Pseudoclavibacter sp.
            RFBA6].
ACCESSION   WP_258066284
VERSION     WP_258066284.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. RFBA6
  ORGANISM  Pseudoclavibacter sp. RFBA6
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024776.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13384.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Pseudoclavibacter sp. RFBA6"
                     /db_xref="taxon:2080573"
     Protein         1..115
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=12934
ORIGIN      
        1 mahlsdrqka elvrqhqdgv pwtrlaehag vavrtlqrwa trmetgqlar aprairdrra
       61 lppnwlqqsr rllcagqhrr sristvasvt llgiadcrpr dtprsarssa rstrv
//
LOCUS       WP_258066296             143 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2726 domain-containing protein [Pasteurella multocida].
ACCESSION   WP_258066296
VERSION     WP_258066296.1
KEYWORDS    RefSeq.
SOURCE      Pasteurella multocida
  ORGANISM  Pasteurella multocida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Pasteurella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022337.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10881.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Pasteurella multocida"
                     /db_xref="taxon:747"
     Protein         1..143
                     /product="DUF2726 domain-containing protein"
                     /calculated_mol_wt=16667
     Region          1..104
                     /region_name="PDDEXK_nuclease-like"
                     /note="PDDEXK family nucleases; cl40440"
                     /db_xref="CDD:477358"
ORIGIN      
        1 mnkseyalft qlktlldtqq ngkyfqlfsq vamgefiqsd dyhafhlinn krvdfliidk
       61 dcqpivaiey qgnghyqnna verdaikkes crkanidyie ftpdydeldf qrvlkivnah
      121 ahrfitneei yvkpnsnqla ksr
//
LOCUS       WP_258066305             120 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6804 family protein [unclassified Rathayibacter].
ACCESSION   WP_258066305
VERSION     WP_258066305.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042853.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20619.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..120
                     /product="DUF6804 family protein"
                     /calculated_mol_wt=12694
     Region          28..108
                     /region_name="DUF6804"
                     /note="Family of unknown function (DUF6804); pfam20619"
                     /db_xref="CDD:466768"
ORIGIN      
        1 mstrkpsrat aarypsrdra rmalapgilg aivllaglal vgsdaydfir ypvailaavi
       61 gwfaiqaral lwliglipvl vlwnpvlpfa fpdaiwfsls laavgvfvaa glvirvptpe
//
LOCUS       WP_258066321             194 aa            linear   BCT 02-MAR-2025
DEFINITION  TrbM/KikA/MpfK family conjugal transfer protein [Pasteurella
            multocida].
ACCESSION   WP_258066321
VERSION     WP_258066321.1
KEYWORDS    RefSeq.
SOURCE      Pasteurella multocida
  ORGANISM  Pasteurella multocida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Pasteurella.
REFERENCE   1  (residues 1 to 194)
  AUTHORS   Kishida,K., Nonoyama,S., Lukas,T., Kawahara,S., Kudo,K., Nagata,Y.,
            Ohtsubo,Y. and Tsuda,M.
  TITLE     Conjugative Transfer of IncP-9 Catabolic Plasmids Requires a
            Previously Uncharacterized Gene, mpfK, Whose Homologs Are Conserved
            in Various MPFT-Type Plasmids
  JOURNAL   Appl Environ Microbiol 85 (24), e01850-19 (2019)
   PUBMED   31604768
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 194)
  AUTHORS   Tralau,T., Cook,A.M. and Ruff,J.
  TITLE     Map of the IncP1beta plasmid pTSA encoding the widespread genes
            (tsa) for p-toluenesulfonate degradation in Comamonas testosteroni
            T-2
  JOURNAL   Appl Environ Microbiol 67 (4), 1508-1516 (2001)
   PUBMED   11282598
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07424.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Pasteurella multocida"
                     /db_xref="taxon:747"
     Protein         1..194
                     /product="TrbM/KikA/MpfK family conjugal transfer protein"
                     /calculated_mol_wt=21781
     Region          33..176
                     /region_name="TrbM"
                     /note="cl21715"
                     /db_xref="CDD:451366"
ORIGIN      
        1 mksalskisi lstvlfmgls snniyaytlg deltgdtkla ceavlclsts srpsecnsai
       61 kryfsirmrk phdtirarln flklcptdvg ldkevlakig vdeeeqkvgl dgltqtianl
      121 pydctpesln qqiekrracs sgecetyyri kptlpkscrd lanhqwtvis lpvykgnykw
      181 ssyrpskpvw flek
//
LOCUS       WP_258066399              40 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2243 domain-containing protein [Rathayibacter sp. AY1D4].
ACCESSION   WP_258066399
VERSION     WP_258066399.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D4
  ORGANISM  Rathayibacter sp. AY1D4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021516.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10002.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..40
                     /organism="Rathayibacter sp. AY1D4"
                     /db_xref="taxon:2080545"
     Protein         1..40
                     /product="DUF2243 domain-containing protein"
                     /calculated_mol_wt=4363
ORIGIN      
        1 mhqvrydvdl llydsvwias gavllaagll llprrrrata
//
LOCUS       WP_258066403             367 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: alanine racemase [unclassified Rathayibacter].
ACCESSION   WP_258066403
VERSION     WP_258066403.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 367)
  AUTHORS   Shaw,J.P., Petsko,G.A. and Ringe,D.
  TITLE     Determination of the structure of alanine racemase from Bacillus
            stearothermophilus at 1.9-A resolution
  JOURNAL   Biochemistry 36 (6), 1329-1342 (1997)
   PUBMED   9063881
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013345.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01168.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..367
                     /product="alanine racemase"
                     /EC_number="5.1.1.1"
                     /calculated_mol_wt=37256
     Region          20..364
                     /region_name="PLPDE_III"
                     /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
                     Enzymes; cl00261"
                     /db_xref="CDD:469695"
     Site            order(53,55,96,146,179,181,239..242)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate (PLP) binding site [chemical
                     binding]"
                     /db_xref="CDD:143494"
     Site            55
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:143494"
ORIGIN      
        1 mtvdtaaads sarsavldal atpalvldea vldrdiaava aaarerglal rphakthksl
       61 eiarrqlaag avgltvatvs eaevfaaggi rdlfiayplw ldaeragrlr hvlasarvrv
      121 gvdsaesaer laaalpereg levvveidsg hhrsgvlpae agaiaaaavs agldvagvft
      181 fpghsyaagn gaaaardear alaesvasla asgvearvvs ggstpsaafa dssvltelrp
      241 gvsalgdaqq weigtttpgd iavtvlativ srrgdhliad agskvlssdr gaassgfgrl
      301 pehpearipv lsehhatitg vdlpvgtrvr iapnhvcvav nladeyrvll rdgggavwpv
      361 dargrns
//
LOCUS       WP_258066422             445 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [unclassified Rathayibacter].
ACCESSION   WP_258066422
VERSION     WP_258066422.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..445
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45043
     Region          2..388
                     /region_name="PRK10504"
                     /note="putative transporter; Provisional"
                     /db_xref="CDD:182502"
ORIGIN      
        1 mlvagcffme nldativtta apaiaadlgv dsaavsitvt aflltvavli pasgwlserf
       61 gvrrvftsai avftlasllc alsptlpllv garvlqgvgg almvpvgrla vlratpregi
      121 ihaiailvwp glvapviapf lggllttvas whwiflinlp lgvvafaiar rivpatsesa
      181 pppldvtglv lvavglgalv gaaglltgse ldgravapll vgavvtalav rhlrraehpl
      241 vrldafrfrt frvanasgsl yratvnavpf llpllfqdaf gwspvqagsv vlalfagnla
      301 ikpattpllr rlgfrgvlva asavgaacma amaflepatp valvvallvl sgvarsagft
      361 ayntvtfaev pqegmsgant lnattqqiaa glgvavgava lavgtaigpg lvpyrvafla
      421 lavltlvpla aaarlprdsg salta
//
LOCUS       WP_258066482             985 aa            linear   BCT 02-MAR-2025
DEFINITION  immunoglobulin-like domain-containing protein [Rathayibacter sp.
            AY2B7].
ACCESSION   WP_258066482
VERSION     WP_258066482.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY2B7
  ORGANISM  Rathayibacter sp. AY2B7
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042837.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20578.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Rathayibacter sp. AY2B7"
                     /db_xref="taxon:2080571"
     Protein         1..985
                     /product="immunoglobulin-like domain-containing protein"
                     /calculated_mol_wt=101260
     Region          <186..252
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          279..348
                     /region_name="aBig_2"
                     /note="Atrophied bacterial Ig domain; pfam20578"
                     /db_xref="CDD:466727"
     Region          361..451
                     /region_name="aBig_2"
                     /note="Atrophied bacterial Ig domain; pfam20578"
                     /db_xref="CDD:466727"
     Region          488..803
                     /region_name="GH43_Bt3655-like"
                     /note="Glycosyl hydrolase family 43 protein such as
                     Bacteroides thetaiotaomicron VPI-5482 arabinofuranosidase
                     Bt3655; cd08983"
                     /db_xref="CDD:350097"
ORIGIN      
        1 mrslflsala ctsvaltgal vpvsaqavdv paptahydms hagsalldis gngrnatltg
       61 ltdasfanag gdqvarfknd gyaslpqglv tgadnafave ytvktqttan qfgwvigdgv
      121 gpwnttqlgn hvfvnprnpd gspsgqvlag irvkeptsng etrmpfggtl npgfttltlv
      181 gtgtgsstvl tlyrdgtqis tanttksmas ivptgstlgy lgrslysgda lvtadvtdvk
      241 fwdtsltaeq vassmptaaa kasatsallr sdiqpvllag npsltqvssn ltlpasssgv
      301 pltwtssnsa vvsatgvvsr siaqntpvtl tattaqgati afevvvlaps inddldalkl
      361 atrttenlpl avkgarngtd itwtssdpal vtptntsyaa pavgaadpyr gggvvtrpay
      421 gsgdrtvtlt atatlngvte trtftltvae lgrtapdagy asayfksdgd ekiyqaatsg
      481 ndfftfspvn ggkavitstt dtkglrdpfi lrshngdkyy mvatdlcisc gtgwgdaqsk
      541 gslkievwes tdlvqwtrtn gadtgitvnq paagmtwape aywddalqsy vvffssrlys
      601 datktnsdkl ysrvfsvitr dfrtftappa twqdtgyari dstitkigdy yyrftkneeg
      661 gaagtleagk diflekskvl tagttssnws adpnttwqlt dtrmtsletg qagegpeiik
      721 lnagdpndtt gtgdgyaflv dnygdggyka fltsgaaiag ssqtnrlsqs adwnvspksr
      781 aglpasprhg afvsvpqtvl tamknwtgvt avdstttlta dgrtvtatva aadkgdvvgs
      841 vtftggswts tvplsggsas vsvpagvtgv tasytgyadk lvrtsvsavv pldtlelvpa
      901 vatrcvagki vltatvkntd taaadvtits aygsksftav apgssasaaf ttrlasmpag
      961 tvtvtgsatg qpaftatvpv aaarc
//
LOCUS       WP_258066573             169 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Rathayibacter
            sp. AY2B7].
ACCESSION   WP_258066573
VERSION     WP_258066573.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY2B7
  ORGANISM  Rathayibacter sp. AY2B7
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Rathayibacter sp. AY2B7"
                     /db_xref="taxon:2080571"
     Protein         1..>169
                     /product="ABC transporter substrate-binding protein"
     Region          1..>168
                     /region_name="OppA"
                     /note="ABC-type oligopeptide transport system, periplasmic
                     component [Amino acid transport and metabolism]; COG4166"
                     /db_xref="CDD:443327"
ORIGIN      
        1 mnirrygfga lalvaastlv lagcsssnds gggasggdaa aiistngsep qnpliptntn
       61 evgggkilde ifaglvyyda kgapendvae siesddaqny tikiksgltf tngdpvtsss
      121 fidawnygak lsnnqlsasf fsnfegfsdt edseltglka vddttftva
//
LOCUS       WP_258066554             650 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase [Arthrobacter sp. GMC3].
ACCESSION   WP_258066554
VERSION     WP_258066554.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. GMC3
  ORGANISM  Arthrobacter sp. GMC3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 650)
  AUTHORS   de la Cruz,J., Kressler,D. and Linder,P.
  TITLE     Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and
            related families
  JOURNAL   Trends Biochem Sci 24 (5), 192-198 (1999)
   PUBMED   10322435
REFERENCE   2  (residues 1 to 650)
  AUTHORS   Aubourg,S., Kreis,M. and Lecharny,A.
  TITLE     The DEAD box RNA helicase family in Arabidopsis thaliana
  JOURNAL   Nucleic Acids Res 27 (2), 628-636 (1999)
   PUBMED   9862990
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012492.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00270.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Arthrobacter sp. GMC3"
                     /db_xref="taxon:2058894"
     Protein         1..650
                     /product="DEAD/DEAH box helicase"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=70292
     Region          23..424
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     Region          493..565
                     /region_name="RRM_EcCsdA_like"
                     /note="RNA recognition motif (RRM) found in Escherichia
                     coli cold-shock DEAD box protein A (CsdA) and similar
                     proteins; cd12499"
                     /db_xref="CDD:409922"
     Site            order(500,505..508,510..512,514..515,521,524..527,
                     557..558,561)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409922"
ORIGIN      
        1 mpentteste ntavntdees eltfaelgid grvlsalsdv gyekpspiqa atiplllegr
       61 dvvglaqtgt gktaafavpa lsrmaelmdl ngptkntqil vlaptrelal qvaeaftsya
      121 kymdnfsvlp vyggsaygpq laglrrgaqv vvgtpgrvid hlskgsldls nlqylvldea
      181 demlrmgfae dveqilaqtp aekqvalfsa tmpgqirris kqylnnpaev tvksktttga
      241 ntrqrylqvm gphkldaltr vleveefdgv iafvrtkmat edladklkar gfqaaaingd
      301 ipqqqrerti eglrdgrfdi lvatdvaarg ldverithvi nydiphdtes yvhrigrtgr
      361 agrsgdailf mtprekyllr aiekatrqpv dqmhlpsaet inslrlgkfa ekitetlatk
      421 dvakfrdlia syeeehdvpa seiaaalavm aqggqpllvn dlpaapeyqk kerskdgfgs
      481 rgptrtlteg natyrisvgr rqrvmpgsiv gaianeggls ssqiggidir adhtlvelpa
      541 elskdqwral sktrisgeli nleldkgrrp tggsapyqgg gerndrgqgg fkkkfdgdrs
      601 gggfrggdrd rggerggfss drgqghtghg ggdrrprheg gqsfnskgkw
//
LOCUS       WP_258066583             230 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphatase PAP2 family protein [Arthrobacter sp. GMC3].
ACCESSION   WP_258066583
VERSION     WP_258066583.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. GMC3
  ORGANISM  Arthrobacter sp. GMC3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 230)
  AUTHORS   Neuwald,A.F.
  TITLE     An unexpected structural relationship between integral membrane
            phosphatases and soluble haloperoxidases
  JOURNAL   Protein Sci 6 (8), 1764-1767 (1997)
   PUBMED   9260289
REFERENCE   2  (residues 1 to 230)
  AUTHORS   Stukey,J. and Carman,G.M.
  TITLE     Identification of a novel phosphatase sequence motif
  JOURNAL   Protein Sci 6 (2), 469-472 (1997)
   PUBMED   9041652
REFERENCE   3  (residues 1 to 230)
  AUTHORS   Messerschmidt,A. and Wever,R.
  TITLE     X-ray structure of a vanadium-containing enzyme: chloroperoxidase
            from the fungus Curvularia inaequalis
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 392-396 (1996)
   PUBMED   8552646
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013718.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01569.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Arthrobacter sp. GMC3"
                     /db_xref="taxon:2058894"
     Protein         1..230
                     /product="phosphatase PAP2 family protein"
                     /calculated_mol_wt=24815
     Region          43..207
                     /region_name="PAP2_like"
                     /note="PAP2_like proteins, a super-family of histidine
                     phosphatases and vanadium haloperoxidases, includes type 2
                     phosphatidic acid phosphatase or lipid phosphate
                     phosphatase (LPP), Glucose-6-phosphatase,
                     Phosphatidylglycerophosphatase B and bacterial acid...;
                     cl00474"
                     /db_xref="CDD:469784"
     Site            order(106,113,134..136,175,181,185)
                     /site_type="active"
                     /db_xref="CDD:238813"
ORIGIN      
        1 mlpqprawfl wvvllsaavl tlglvakdlp gftsgefsld qelsrthnta ltgvamtlny
       61 vfsplggfvi iaavalyllv arkspinafa fggvaaagwl ssqlfkmive rqrpnpallf
      121 dplapetgsn sfpsghvala vglawafyfl arnsrwarta vilgvglpvi vawsrlyigv
      181 hypsdvlasf laatamvflf aglwnryqer ilpriplvar fgpitspnns
//
LOCUS       WP_258066609             119 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Rathayibacter sp. AY1F6].
ACCESSION   WP_258066609
VERSION     WP_258066609.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1F6
  ORGANISM  Rathayibacter sp. AY1F6
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00528.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Rathayibacter sp. AY1F6"
                     /db_xref="taxon:2080560"
     Protein         1..119
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=12000
     Region          <1..68
                     /region_name="PotC"
                     /note="ABC-type spermidine/putrescine transport system,
                     permease component II [Amino acid transport and
                     metabolism]; COG1177"
                     /db_xref="CDD:440790"
ORIGIN      
        1 maadlaglda vtlseaarsl gagplavlgr vllpnlrrgl vaaalitvav vlgeytiasl
       61 lsrttlqtgl vqvsktdayv avifsllsll fafalllgig rlariglptg rarsskgss
//
LOCUS       WP_258066625             900 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Rathayibacter sp. AY1F6].
ACCESSION   WP_258066625
VERSION     WP_258066625.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1F6
  ORGANISM  Rathayibacter sp. AY1F6
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 900)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Rathayibacter sp. AY1F6"
                     /db_xref="taxon:2080560"
     Protein         1..900
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=92917
     Region          66..324
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     Region          351..894
                     /region_name="PRK09274"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:236443"
ORIGIN      
        1 msaphpaeri rgalgstaaa qlppagldgl dpawsrlvda pdaqgvprrw hlldtgealg
       61 tepvgtvlcv hgnptwsylw rrlaaatles arrggpawrv vavdqlemgf sertgalhtl
      121 adrvrelsdl tdvlglddvv tlghdwggvv slgwavdhpe qlratmllnt aihqsadepi
      181 paplrlalas gvlgastvgt paflettlal ghpalpsavk egyrapyrsa srrggvggfv
      241 adipvdsahp sdpelqriae gvsalttpal mlwgpldpif sdrylddlvd rlphaqvhry
      301 egaghlvaed vdyssavltw lgdlsdgeep fggdpapdvr rptapveplw ahlgrnaqdd
      361 slalvemapp ggggprsvsw rllsqrvrel taglrasgvs pgdrvsllvp pgadltally
      421 aclrigavvv vadaglglrg ltravrgawp dlvvgalpgl avaralrwpg grvstqtlpr
      481 asasalgvdt slgqlielgr aelaadpeal geapaadava ailftsgstg pakgvvythr
      541 qlagvrdala rqygigpgtg lvagfapfal lgpalgtrsa tpdmdvtapr tltaaavaaa
      601 aarvdatvlf lspaalanvv atagaldadd hralagvrtf lsagapvsag llgeaqalmp
      661 nasartpygm tegllltdas legireaasd ddprggvcvg vpaagvrlri apldadgrat
      721 depeeitgtt geivvsaghv edhyerlwlt draarvgavp gerwhrtgdv gridsagrlw
      781 vegrmphvvv tpdgvvtpvg peqriearva svaraaivga gprgvaqlva vvelrsgarr
      841 vvlaeealaa evraavarpv aavlvvpalp tdirhnskid raalsrwaeg vlaggrmvap
//
LOCUS       WP_258066634             963 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Rathayibacter sp. AY1F6].
ACCESSION   WP_258066634
VERSION     WP_258066634.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1F6
  ORGANISM  Rathayibacter sp. AY1F6
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 963)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Rathayibacter sp. AY1F6"
                     /db_xref="taxon:2080560"
     Protein         1..963
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=101502
     Region          46..340
                     /region_name="GH43_FsAxh1-like"
                     /note="Glycosyl hydrolase family 43 such as Fibrobacter
                     succinogenes subsp. succinogenes S85 arabinoxylan
                     alpha-L-arabinofuranosidase; cd09001"
                     /db_xref="CDD:350115"
     Site            order(58,83,130..131,176..177,235,294..295,315,317,323)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:350115"
     Region          407..533
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; pfam02018"
                     /db_xref="CDD:396553"
     Region          571..787
                     /region_name="GH43_C2"
                     /note="Beta xylosidase C-terminal Concanavalin A-like
                     domain; pfam17851"
                     /db_xref="CDD:436093"
ORIGIN      
        1 mravastaig allaagllas gaapataaga wspkasytst drgdgtysvp llnadvpdvs
       61 vervpasend egrdiyymis ttmhlspgap imksydlvnw eivnyvfdrl eigdrfslrn
      121 gqnsygngqw asslryhdgr yyavfntnnl ggsylystdd iedgawtrta lgrafhdpsl
      181 ffddadggtp yifygsgsts avklsedltt vvaeypnilr tsdypgagyl gglfegaqvq
      241 yidgqyyivi itwpsgqgrq valfrssell gryatadgsn pyegrgvlns sgfaqgslvp
      301 iakedgstaw hgmffrdsfp tgripglipa twkdgwptfg tngsvpvggs fpkpirlspe
      361 eelferqksi vvsddfdnda pakayqdesw tippapsyda sllgvqllqn pgaesgtapw
      421 agqfgatlsa dttdpasgta alrvgtrtln gsgpsqvlan klqrgvtytv sakvkyttgp
      481 asvrfnlcad fgagpvtias aavtqgqwtt itgtytvpet anvgsvkfav etpwgnpqpa
      541 sssteylldd vslvgaaptl erptaaeiep ngstlalpwq wnhapdnryw slteregwlr
      601 ltngkvlsgt aahtrlsgsp emtyleearn tlsqrivapk qsaeaafdvs gmkdgdvagl
      661 aaynrgfsyv avkrvdgvtt vgvvnrsqpf attfdqaave sflpgttaal gdasqvrlka
      721 dlelsapagq lwttfsysld gtswtklgsr vgpqtldgql thfmghrlgl fsyatktagg
      781 hvdvdeflls dtlssegkal drsqldaava haatlrsddy padawsdlqs vlakaqavgt
      841 agtqnqidap eralsyqlar lgtlkeasld vnaaaatrci agkvvvtvra tnaddvpval
      901 rmesasgtkt vaalapgatt shafttraas vpaaevvvta tatldgepvt ttvraphpaa
      961 scg
//
LOCUS       WP_258066776             318 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF998 domain-containing protein [unclassified
            Rathayibacter].
ACCESSION   WP_258066776
VERSION     WP_258066776.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017959.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06197.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..318
                     /product="DUF998 domain-containing protein"
                     /calculated_mol_wt=32906
     Region          3..212
                     /region_name="DUF998"
                     /note="Protein of unknown function (DUF998); cl21592"
                     /db_xref="CDD:473918"
     Region          <207..311
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mgtrgagvlw vvsalayvga eavaasafpg ysyarnyisd lgvpevgvfq graidsplha
       61 vmnagfllqg alylaaavtt vraarggsrg lflslavvya vgiavvglvh gssasaqngi
      121 gglhvvgaam aivggnaasi vagaaarrgr apwaletvgi vlgaagllal lmlqvdtrvp
      181 gvdllpdgvw erasvyavta wqlatglrll rrpevprqpr ppqtagsgaq vrsavhrlfq
      241 lgiripeals vvvfddnpws elvtpplsvv rqpidmlarh svelvlarmq grlpeapqhi
      301 evqadlvirs scaappqr
//
LOCUS       WP_258066849             914 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Arthrobacter sp. GMC3].
ACCESSION   WP_258066849
VERSION     WP_258066849.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. GMC3
  ORGANISM  Arthrobacter sp. GMC3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 914)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Arthrobacter sp. GMC3"
                     /db_xref="taxon:2058894"
     Protein         1..914
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=94419
     Region          69..315
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     Region          362..908
                     /region_name="PRK09274"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:236443"
ORIGIN      
        1 mvapavpges slsvtpgyad pwpgvrarwr rtlsvpssaa vdapgtrhqw hfldnaddva
       61 atglepagtl lcvhgnptws ylwrsllaga tapttlaagg pwrviavdql dmgfsertgt
      121 frrledritd lgdlsealsl sgpvvtvghd wgglislgwa trhrdqlaav vltntavhpa
      181 gfslppalkl alhpavhkwg tttssaflrv thglaqpala pevrdafmap yttafrragv
      241 gnfvadipat pahpswaald avssgirtle vpalmmwgpk dpvfsdrylq dlltrlpqad
      301 vhrfegashl vqedrdiatp tfawlaknvs tgqepatssa aanpasdtst seyrpmlael
      361 darrgdnsta ivdmlaaglr gprgelashg strgltwaql ardvddlalg ladlgvksgd
      421 rvcllvppgi nlttliyacl rlgavivvad aglgtqgmsr aikgagpayl igieralaga
      481 rlynwpgvki saddfsaaag lkqsvlnvaa svpellangr alrvagtapt fsaanpdhda
      541 avlftsgstg pakgvvythr rlaamrdalk etynlaagta lvagfapfal lgpalgattv
      601 tpdmdvtapr tltaqalaea aaainasvvf aspaalvnvv atqdaltaha haalsgvelv
      661 lsagaplaeq lldqvqlltp navlhtpygm tealpvtdid lagirragag ngvcvghavs
      721 gatvaiapin pdgsvtgqpt vdpnvtgeil vraphvkery drlwiteels tsipgwhrtg
      781 dvghldtegr lwvegrlahv lttaagavtp vaveqalell pvvaraalvg vgpagaqvav
      841 avvetvpaak qsgladpqva aavrasalaa gaelaavlvi damptdirhn skidrtalsa
      901 wasrmlsgqk agrp
//
LOCUS       WP_258066852             312 aa            linear   BCT 02-MAR-2025
DEFINITION  DAK2 domain-containing protein [Arthrobacter sp. GMC3].
ACCESSION   WP_258066852
VERSION     WP_258066852.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. GMC3
  ORGANISM  Arthrobacter sp. GMC3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014754.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02734.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Arthrobacter sp. GMC3"
                     /db_xref="taxon:2058894"
     Protein         1..312
                     /product="DAK2 domain-containing protein"
                     /GO_function="GO:0004371 - glycerone kinase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006071 - glycerol metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=31927
     Region          4..>297
                     /region_name="YloV"
                     /note="Predicted kinase related to dihydroxyacetone kinase
                     [General function prediction only]; COG1461"
                     /db_xref="CDD:441070"
ORIGIN      
        1 maeqtlanhs drlnainiyp vadadtgtnl yltvrsasqa ladiepcdvg atmaaagraa
       61 meqargnsgt lfsvflsala eplagqsrls apllaaalqr aqlrswsals epvpgtilsv
      121 leaaargasi megslngdds nqalaltlda avqaareavv ltesqlgvla dahvvdaggv
      181 glllildclr svvlgvplde elldglsgyk vqdpnialtm peqlgvevmc tlnltplaaa
      241 glrmqldelg dsvimsavte tadatgaypw rihvhvpspa ialdaiqavg dpsnvsisal
      301 spnaandahd ll
//
LOCUS       WP_258066955             134 aa            linear   BCT 02-MAR-2025
DEFINITION  TadE/TadG family type IV pilus assembly protein [Arthrobacter sp.
            GMC3].
ACCESSION   WP_258066955
VERSION     WP_258066955.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. GMC3
  ORGANISM  Arthrobacter sp. GMC3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 134)
  AUTHORS   Kachlany,S.C., Planet,P.J., DeSalle,R., Fine,D.H. and Figurski,D.H.
  TITLE     Genes for tight adherence of Actinobacillus actinomycetemcomitans:
            from plaque to plague to pond scum
  JOURNAL   Trends Microbiol 9 (9), 429-437 (2001)
   PUBMED   11553455
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019428.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07811.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Arthrobacter sp. GMC3"
                     /db_xref="taxon:2058894"
     Protein         1..134
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /calculated_mol_wt=13562
ORIGIN      
        1 mrcgkdarkt gghpesgaav vdfvlvsalv aimflalvql alvlhvrntv adaassaary
       61 galadrtaqd aqeratflie salggaygqd vsatvteadg iailtvtvia plpligllgp
      121 geslqmsgha iipr
//
LOCUS       WP_258067028             403 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Rathayibacter sp. AY1C9].
ACCESSION   WP_258067028
VERSION     WP_258067028.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1C9
  ORGANISM  Rathayibacter sp. AY1C9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 403)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012417.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00190.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Rathayibacter sp. AY1C9"
                     /db_xref="taxon:2080541"
     Protein         1..403
                     /product="cupin domain-containing protein"
                     /GO_function="GO:0045735 - nutrient reservoir activity
                     [Evidence IEA]"
                     /calculated_mol_wt=44175
     Region          32..393
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     Site            order(87,97..98,100,102,119,121,123,125,150,152,172,174,
                     176,202)
                     /site_type="other"
                     /note="intramolecular domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:380438"
     Site            order(103,111,114,116,120,159,173,175)
                     /site_type="active"
                     /db_xref="CDD:380438"
ORIGIN      
        1 mepddstaph hetpgfgdpd lpqegivnte gdpsantmtg pqnrvleglf pnqiaapatd
       61 istqpffwss fnisprrvqr ggwareltqa dfaisneiag vnmyleaggi relhwhqsae
      121 walmtkgncr ittlsrtgrp svddvqegdl wyfppglphs lqglgpdgae fvlafddgeq
      181 sesntllltd wfahtppdvl aknfgvaqev frdiplhdlw ifpgdvpgdl padraaagvq
      241 dgdeavifrl srsepayqns ggriqiadst nfpasrtvsa alttvepgsm relhwhpnad
      301 ewqyylrgsa rmtvfntgph anttdfhagd vgvvrrnfgh yventgddtl vyietfkssh
      361 yeevslaqwl shlppslvaq hlnipeevla tfppgtqgit plr
//
LOCUS       WP_258067146             469 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Arthrobacter sp. GMC3].
ACCESSION   WP_258067146
VERSION     WP_258067146.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. GMC3
  ORGANISM  Arthrobacter sp. GMC3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Arthrobacter sp. GMC3"
                     /db_xref="taxon:2058894"
     Protein         1..469
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=49378
     Region          21..451
                     /region_name="PRK10504"
                     /note="putative transporter; Provisional"
                     /db_xref="CDD:182502"
ORIGIN      
        1 msrtrttpsl tpsfsralal lvagtyfmei ldgtiiataa tgiaddlgvr pvdinlamts
       61 ylitlavgip isgwlaeryg arrvftaaia iftvasllca lspnlaflca armlqgmgga
      121 lmvpvgrlvv lrdadrkefl eaiayltwpa liapviapal ggllttyasw hwiflinvpl
      181 givafmvalr vvpsikahkm pppdwtgfil cgialaalvi gleqvgsapt pwvgvvlwll
      241 lalasgagal wwfkrsrhpl ldlralriht frvgngggal yrlvinavpf llplmfmlgf
      301 gwsafaaglm tmavfagnvl ikpattplir rfgfrnvlll snaggalilg acallgpdtp
      361 lpliaavlfa sgvlrsigfs ayntlqfadv pqarmadant lsstiaqiat glgvavgali
      421 lraadslldg appqsayqwt favlgvlmlv pvveaalmtr nagdavrtr
//
LOCUS       WP_258067153             259 aa            linear   BCT 02-MAR-2025
DEFINITION  methylenetetrahydrofolate reductase [Arthrobacter sp. GMC3].
ACCESSION   WP_258067153
VERSION     WP_258067153.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. GMC3
  ORGANISM  Arthrobacter sp. GMC3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 259)
  AUTHORS   Guenther,B.D., Sheppard,C.A., Tran,P., Rozen,R., Matthews,R.G. and
            Ludwig,M.L.
  TITLE     The structure and properties of methylenetetrahydrofolate reductase
            from Escherichia coli suggest how folate ameliorates human
            hyperhomocysteinemia
  JOURNAL   Nat Struct Biol 6 (4), 359-365 (1999)
   PUBMED   10201405
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02219.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Arthrobacter sp. GMC3"
                     /db_xref="taxon:2058894"
     Protein         1..259
                     /product="methylenetetrahydrofolate reductase"
                     /EC_number="1.5.1.20"
                     /GO_function="GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA]"
                     /GO_process="GO:0006555 - methionine metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=26834
     Region          28..258
                     /region_name="MTHFR"
                     /note="Methylenetetrahydrofolate reductase (MTHFR).
                     5,10-Methylenetetrahydrofolate is reduced to
                     5-methyltetrahydrofolate by methylenetetrahydrofolate
                     reductase, a cytoplasmic, NAD(P)-dependent enzyme.
                     5-methyltetrahydrofolate is utilized by methionine
                     synthase...; cl00246"
                     /db_xref="CDD:444783"
     Site            order(32,58,88..90,101..102,122,124,128,136,139,142..143,
                     151,153,244)
                     /site_type="other"
                     /note="FAD binding site [chemical binding]"
                     /db_xref="CDD:238299"
ORIGIN      
        1 mlptrleiip tdgivaavra qvpagatvtv tclphhgver tmdtaqmlag hgfnavphla
       61 arsiesreql asivractts gitevfvigg dkaqpagpfa sgeslmreia elsantltmg
      121 vagypeghpa isdnqllesl qakqelashi vtqmcfspav igdymdtlrt egvglpvlag
      181 vagnvprtkl lllaakigvg sslkfisgkg alsrslligs ryqsgelira ltslphppag
      241 vhlytfnnld sepvaevag
//
LOCUS       WP_258067204             248 aa            linear   BCT 02-MAR-2025
DEFINITION  HAD hydrolase-like protein [Arthrobacter sp. GMC3].
ACCESSION   WP_258067204
VERSION     WP_258067204.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. GMC3
  ORGANISM  Arthrobacter sp. GMC3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024811.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13419.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Arthrobacter sp. GMC3"
                     /db_xref="taxon:2058894"
     Protein         1..248
                     /product="HAD hydrolase-like protein"
                     /calculated_mol_wt=25008
     Region          16..228
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     Site            order(20..24,119..120,162,184..185,188..189)
                     /site_type="active"
                     /db_xref="CDD:319798"
ORIGIN      
        1 mtiaappial nrllkavlfd ldgtlvdpag gitggiehal tvmglpvpgp dvlaamigpk
       61 ladalvshag vhldqvpdvi avyrswyast gmgmsvlypg ikdvlvelra agialavatq
      121 kpeplaktll ahhgiaghfd iicgsnpdet lmpgdpgyrq gkseiiaaal edlavpagsa
      181 vmvgdrhqdv ngarangldc igvawgfape geleaagvaa vvqstselas mlaaatlaqg
      241 aedvhgal
//
LOCUS       WP_258067299             195 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase family protein [Arthrobacter sp. GMC3].
ACCESSION   WP_258067299
VERSION     WP_258067299.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. GMC3
  ORGANISM  Arthrobacter sp. GMC3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026041.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14690.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Arthrobacter sp. GMC3"
                     /db_xref="taxon:2058894"
     Protein         1..195
                     /product="transposase family protein"
                     /calculated_mol_wt=21803
     Region          46..86
                     /region_name="zf-ISL3"
                     /note="zinc-finger of transposase
                     IS204/IS1001/IS1096/IS1165; pfam14690"
                     /db_xref="CDD:464264"
ORIGIN      
        1 mteptlvhpd aattifnldd yrvlatqils fgqrrihies tvesgcpgcg vigtrrhsgr
       61 qqrvrdipva gpvevvwakr rllcdesscp hktffeatle vpararttsr lrsalvkavv
      121 asgraatett tvhgvswwrv qkalsmaamk lpnvdllrpr mlaidehrfr svrffkntet
      181 nawqliepwm ttiva
//
LOCUS       WP_258067360             900 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: alpha/beta fold hydrolase [unclassified
            Rathayibacter].
ACCESSION   WP_258067360
VERSION     WP_258067360.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 900)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..900
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=92881
     Region          66..324
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     Region          351..894
                     /region_name="PRK09274"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:236443"
ORIGIN      
        1 mtaphpaeri rgalgstaaa qlppagldgl dpawsrlvda pdaqgvprrw hlldtgealg
       61 tepvgtvlcv hgnptwsylw rrlaaatles arrggpawrv vavdqlemgf sertgalhtl
      121 adrvrelsnl tdvlglddvv tlghdwggvv slgwavdhpq qlraamllnt aihqsadepi
      181 paplrlalas gvlgastvgt paflettlal grpalptavk egyrapyrsa srrggvggfv
      241 adipvdsahp sdpelqriaq gvstlttpal mlwgpldpif sdrylddlvd rlphaqvhry
      301 egaghlvaed vdyasavltw lgdlsdgdep fggdpapdir rptapveplw ahldrnaqdg
      361 slalvemapp ggggprsvsw rllsqrvrel aaglrasgvs sgdrvsllvp pgadltally
      421 aclrigavvv vadaglglrg ltravrgawp dlvvgalpgl tvaralrwpg grvstqtlpr
      481 asaaalgvdt slgqlielgr aelaadpeal geppaadava ailftsgstg pakgvvythr
      541 qlagvrdala rqygigpgtg lvagfapfal lgpalgtrsa tpdmdvtapr tltasavaaa
      601 aarvdatvlf lspaalanvv atagaldadd hralagvrtf lsagapvsag llgeaqalmp
      661 nasartpygm tegllltdas legireaasd ddprggvcvg vpaagvrlri apldadgraa
      721 depeeivgat geivvsaghv edhyerlwlt draarigavp gerwhrtgdv gridsagrlw
      781 vegrmphvvv tpdgvvtpvg peqriearva pvaraaivga gprgvaqlva vvelrsgarr
      841 valaeealaa evraavgrpv aavlvvpalp tdirhnskid raalsrwaeg vlaggrmvap
//
LOCUS       WP_258067373             414 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: glycosyltransferase [unclassified Rathayibacter].
ACCESSION   WP_258067373
VERSION     WP_258067373.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..414
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=44849
     Region          20..395
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 msdprdasrp gspdsrpltv vigcdtfapd vngaakfaer laaglaqrgh evhvvapsad
       61 gwsgtrveth egqriivhrl yswrwyphdw lrfampwrir qnsarildev kpdvvhfqsh
      121 iivgrglgie aakrgirivg tnhfmpenml eftllpkavq akavamawra arrtfgraea
      181 vttptrkaaq flekytglrg vhsiscgida dnytpdfear agnsilfvgr vtgekhidvl
      241 lravalldpa ldakleivgg gdqmrnlqql attlgiadrv rftgyvsdad lkeaytratv
      301 fampsiaelq siatmeamas alpvvaadam alphlvhdge ngylfapgsa ealaerltav
      361 ltadredfea mkraslriva ahdinrtist feslyrgepv avpasdaasa paat
//
LOCUS       WP_258067376             520 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: AAA family ATPase [unclassified Rathayibacter].
ACCESSION   WP_258067376
VERSION     WP_258067376.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 520)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 520)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012234.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00004.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..520
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=52884
     Region          211..472
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            262..269
                     /site_type="other"
                     /note="Walker A motif"
                     /db_xref="CDD:99707"
     Site            order(263..270,325,361)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:99707"
     Site            321..326
                     /site_type="other"
                     /note="Walker B motif"
                     /db_xref="CDD:99707"
     Site            378
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:99707"
ORIGIN      
        1 mtalapalda lvlagtaagl eaaavrdega rlaaavaesi rgagpdwlaa tgatggleaf
       61 ftaassgrrw rsgptdqlaa lvaagsphaa pyaraltevv saasalgdpg iggiasasat
      121 aaaqlsavpg argaaattgg galrttgrtp dgaasadlpt glpagvpgid eilerlrrte
      181 hdgpqdepap aaaaaaepas epepldppes iddllaelda ligldrvkse ikrqtqllri
      241 dtlrqaagls tptltrhlvf tgnpgtgktt varlvsriyr slgilskgvl vevdrselva
      301 gylgqtatkt aeviasargg vlfideayal aldqygaeav ttlvkdmedh rgdlvvivag
      361 ysgpmqgfld tnpglasrfs ttidfadysd delsaifgrl aasadfepte ealaafagla
      421 saqqrteafg ngrwvrnvld aaiarhawrl rdveeptlde lrillpedvv espdasggpd
      481 gpgedaegav agseeafgqp daapsgaapp vtddpeeesr
//
LOCUS       WP_417281904             201 aa            linear   BCT 02-MAR-2025
DEFINITION  hypothetical protein [Catellatospora aurea].
ACCESSION   WP_417281904
VERSION     WP_417281904.1
KEYWORDS    RefSeq.
SOURCE      Catellatospora aurea
  ORGANISM  Catellatospora aurea
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Catellatospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Catellatospora aurea"
                     /db_xref="taxon:1337874"
     Protein         1..201
                     /product="hypothetical protein"
                     /calculated_mol_wt=22532
ORIGIN      
        1 madtpmplpg ftawpsfpfe gdfkikhldp pvetepsrkg edsadctact apddayiwvn
       61 erwrvrtmdr ptglpmvlml eprshldlgd lpnllaaelg vmtvrlerai rsldkvarvh
      121 vyrwgdgaah lhvwfmarpv gqlqlrgtfl plwddilppi pedqwresla hvaawlaefg
      181 gtplaqppri dwqapakltd s
//
LOCUS       WP_258067476             367 aa            linear   BCT 02-MAR-2025
DEFINITION  alanine racemase [Rathayibacter sp. AY1C7].
ACCESSION   WP_258067476
VERSION     WP_258067476.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1C7
  ORGANISM  Rathayibacter sp. AY1C7
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 367)
  AUTHORS   Shaw,J.P., Petsko,G.A. and Ringe,D.
  TITLE     Determination of the structure of alanine racemase from Bacillus
            stearothermophilus at 1.9-A resolution
  JOURNAL   Biochemistry 36 (6), 1329-1342 (1997)
   PUBMED   9063881
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013345.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01168.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Rathayibacter sp. AY1C7"
                     /db_xref="taxon:2080540"
     Protein         1..367
                     /product="alanine racemase"
                     /EC_number="5.1.1.1"
                     /calculated_mol_wt=37374
     Region          20..364
                     /region_name="PLPDE_III"
                     /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
                     Enzymes; cl00261"
                     /db_xref="CDD:469695"
     Site            order(53,55,96,146,179,181,239..242)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate (PLP) binding site [chemical
                     binding]"
                     /db_xref="CDD:143494"
     Site            55
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:143494"
ORIGIN      
        1 mtvdtaaads sarsavldal atpalvldea vldrdiaava aaarerglal rphakthksl
       61 eiarrqlaag avgltvatvs eaevfaaggi rdlfiayplw ldaeragrlr hvlasarvrv
      121 gvdsaesaer laaalpereg levvveidsg hhrsgvlpae agaiaaaavs agldvagvft
      181 fpghsyaagn gaaaardear alaesvasla asgvearvvs ggstpsaafa dssvltelrp
      241 gvsalgdaqq weigtmtped iavtvlativ srrgdhliad agskvlssdr gaassgfgrl
      301 pehpearipv lsehhatitg vdlpvgtrvr iapnhvcvav nladeyrvll rdgggsvwpv
      361 dargrns
//
LOCUS       WP_258067465             796 aa            linear   BCT 02-MAR-2025
DEFINITION  heparinase II/III domain-containing protein [Pseudoclavibacter sp.
            RFBI5].
ACCESSION   WP_258067465
VERSION     WP_258067465.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. RFBI5
  ORGANISM  Pseudoclavibacter sp. RFBI5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
REFERENCE   1  (residues 1 to 796)
  AUTHORS   Meier,E.L., Razavi,S., Inoue,T. and Goley,E.D.
  TITLE     A novel membrane anchor for FtsZ is linked to cell wall hydrolysis
            in Caulobacter crescentus
  JOURNAL   Mol Microbiol 101 (2), 265-280 (2016)
   PUBMED   27028265
REFERENCE   2  (residues 1 to 796)
  AUTHORS   Dong,W., Lu,W., McKeehan,W.L., Luo,Y. and Ye,S.
  TITLE     Structural basis of heparan sulfate-specific degradation by
            heparinase III
  JOURNAL   Protein Cell 3 (12), 950-961 (2012)
   PUBMED   23011846
REFERENCE   3  (residues 1 to 796)
  AUTHORS   Shaya,D., Tocilj,A., Li,Y., Myette,J., Venkataraman,G.,
            Sasisekharan,R. and Cygler,M.
  TITLE     Crystal structure of heparinase II from Pedobacter heparinus and
            its complex with a disaccharide product
  JOURNAL   J Biol Chem 281 (22), 15525-15535 (2006)
   PUBMED   16565082
REFERENCE   4  (residues 1 to 796)
  AUTHORS   Pojasek,K., Shriver,Z., Hu,Y. and Sasisekharan,R.
  TITLE     Histidine 295 and histidine 510 are crucial for the enzymatic
            degradation of heparan sulfate by heparinase III
  JOURNAL   Biochemistry 39 (14), 4012-4019 (2000)
   PUBMED   10747789
REFERENCE   5  (residues 1 to 796)
  AUTHORS   Su,H., Blain,F., Musil,R.A., Zimmermann,J.J., Gu,K. and
            Bennett,D.C.
  TITLE     Isolation and expression in Escherichia coli of hepB and hepC,
            genes coding for the glycosaminoglycan-degrading enzymes heparinase
            II and heparinase III, respectively, from Flavobacterium heparinum
  JOURNAL   Appl Environ Microbiol 62 (8), 2723-2734 (1996)
   PUBMED   8702264
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019552.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07940.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Pseudoclavibacter sp. RFBI5"
                     /db_xref="taxon:2080578"
     Protein         1..796
                     /product="heparinase II/III domain-containing protein"
                     /GO_function="GO:0016829 - lyase activity [Evidence IEA]"
                     /calculated_mol_wt=84858
     Region          <100..599
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
ORIGIN      
        1 mtdtrpkptl rapllhafta qlglrgdldl aaalrailad pndalpvppa sswepdgpdp
       61 mtlaalsara rtergtpwpq plasdaaryh gdgdrlawet pafarqerlt rvavaatadp
      121 amlgdvvdgi tllceqsswc wpahddtlqr hgsvlatvtd pyldlgagev vgqlawidql
      181 lgdqldaqyp gvrarirhea rvrvfepftr rrdwhwlgld gdahnwnpwi hgnvlvaalr
      241 llddpteade rarilalvie gldryvavlp edgaidegya ywwngacrll ealdlltsat
      301 ggrldpvpsi ralretvafp hrmhlgvgwf vnaadgqakp sadqpwhslh raavragdpd
      361 aqrfaashrr pdspavveae glgrvlrgmt daawlqaras tpptpaatwl pstqmlvarq
      421 legsssglsv avkgghnneh hnhndvgsfl lasdgvpviv dagrpsydar tfserryelw
      481 pmqsewhnvp fvagrgqptg rehaatvidv qtgdapslel elagaydvae leswrrevrl
      541 dreraevrih dawrfaqpgp apaaaaaaps paphagpala apaepsapae lwpnaiardt
      601 nrtspqlsat eaapaphapt patspapdpa appaestssp apaaapaepa avaeepaagk
      661 klwanaigrd anrtspqlsa aeaagatqlr lllagevald gdedsasasa nagparrgat
      721 vtplagapri ritwdegvha sltpieledp mltdvwgprl vrldldvahr stltvtarqe
      781 hstlplgqte avgvte
//
LOCUS       WP_258067481             900 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Rathayibacter sp. AY1C7].
ACCESSION   WP_258067481
VERSION     WP_258067481.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1C7
  ORGANISM  Rathayibacter sp. AY1C7
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 900)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Rathayibacter sp. AY1C7"
                     /db_xref="taxon:2080540"
     Protein         1..900
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=92920
     Region          66..324
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     Region          351..894
                     /region_name="PRK09274"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:236443"
ORIGIN      
        1 msaphpaeri rgalgstaaa qlppagldgl dpawsrlvda pdaqgvprrw hlldtgealg
       61 tepvgtvlcv hgnptwsylw rrlaaatles arrggpawrv vavdqlemgf sertgalhtl
      121 adrvrelsdl tdvlglddvv tlghdwggvv slgwavdhpe qlratmllnt aihqsadepi
      181 paplrlalas gvlgastvgt paflettlal ghpalpsavk egyrapyrsa srrggvggfv
      241 adipvdsahp sdpelqriae gvsalttpal mlwgpldpif sdrylddlvd rlphaqvhry
      301 egaghlvaed vdyssavltw lgdlsdgeep fggdpaadvr rptapveplw ahldrsaqdd
      361 slalvemapp ggggprsvsw rllsqrvrel aaglrasgvs pgdrvsllvp pgadltally
      421 aclrigavvv vadaglglrg ltravrgawp dlvvgalpgl tvaralrwpg grvstqtlpr
      481 asasalgvdt slgqlielgr aelaadpeal geapaadava ailftsgstg pakgvvythr
      541 qlagvrdala rqygigpgtg lvagfapfal lgpalgtrsa tpdmdvtapr tltaaavasa
      601 aarvdatvlf lspaalanvv atagaldadd hralagvrtf lsagapvsag llgeaqalmp
      661 nasartpygm tegllltdas legireaaad ddprggvcvg vpaagvrlri apldvdgraa
      721 depeeitgtt geivvsaghv edhyerlwlt draarigavp gerwhrtgdv gridsagrlw
      781 vegrmphvvv tpdgvvtpvg peqriearva svaraaiaga gprgvaqlva vvelrsgvrr
      841 vvlaeealaa evraavgrpv aavlvvpalp tdirhnskid raalsrwaeg vlaggrmvap
//
LOCUS       WP_258067512             963 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Rathayibacter sp. AY1C7].
ACCESSION   WP_258067512
VERSION     WP_258067512.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1C7
  ORGANISM  Rathayibacter sp. AY1C7
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 963)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Rathayibacter sp. AY1C7"
                     /db_xref="taxon:2080540"
     Protein         1..963
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=101458
     Region          46..340
                     /region_name="GH43_FsAxh1-like"
                     /note="Glycosyl hydrolase family 43 such as Fibrobacter
                     succinogenes subsp. succinogenes S85 arabinoxylan
                     alpha-L-arabinofuranosidase; cd09001"
                     /db_xref="CDD:350115"
     Site            order(58,83,130..131,176..177,235,294..295,315,317,323)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:350115"
     Region          407..533
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; pfam02018"
                     /db_xref="CDD:396553"
     Region          571..787
                     /region_name="GH43_C2"
                     /note="Beta xylosidase C-terminal Concanavalin A-like
                     domain; pfam17851"
                     /db_xref="CDD:436093"
ORIGIN      
        1 mravastaig allaagllas gaapataaga wspkasytst drgdgtysvp llnadvpdvs
       61 vervpasend egrdiyymis ttmhlspgap imksydlvnw eivnyvfdrl eigdrfslrn
      121 gqnsygngqw asslryhdgr yyavlntnnl ggsylystdd iedgawtrta lgrafhdpsl
      181 ffddadggtp yifygsgsts avklsedltt vvaeypnilr tsdypgagyl gglfegaqvq
      241 yidgqyyivi itwpsgqgrq valfrssell gryatadgsn pyegrgvlns sgfaqgslvp
      301 iakedgstaw hgmffrdsfp tgripglipa twkdgwptfg tngsvpvggs fpkpirlspe
      361 eelferqksi vvsddfdnda pakayqdesw tippapayda sllgvqllqn pgaesgtapw
      421 agqfgatlsa dttdpasgta alrvgtrtln gsgpsqvlan klqrgvtytv sakvkyttgp
      481 asvrfnlcad fgagpvtmas aavtqgqwtt itgtytvpet anvgsvkfav etpwgnpqpa
      541 sssteylldd vslvgaaptl erptaaeiqp ngstlalpwq wnhapdnryw slteregwlr
      601 ltngkvlsgt aahtrlsgsp emtyleearn tlsqrivapk qsaeaafdvs gmkdgdvagl
      661 aaynrgfsyv avkrvdgvtt vgvvnrsqpf attfdqaave sflpgttaal gdasqvrlka
      721 dlelsapagq lwttfsysld gtswtklgsr vgpqtldgql thfmghrlgl fsyatktagg
      781 hvdvdeflls dtlssegkal drsqldaava haatlrsddy padawsdlqs vlakaqsvgt
      841 agtqnqidap eralsyqlar lgtlkeasld vtaaaatrci agkvvvtvra tnaddvpval
      901 rmesasgtkt vaalapgatt shafttraas vpaaevvvta tatvdgepvt ttvraphpaa
      961 scg
//
LOCUS       WP_258067568             485 aa            linear   BCT 02-MAR-2025
DEFINITION  amino acid permease [Pseudoclavibacter sp. RFBI5].
ACCESSION   WP_258067568
VERSION     WP_258067568.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. RFBI5
  ORGANISM  Pseudoclavibacter sp. RFBI5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Pseudoclavibacter sp. RFBI5"
                     /db_xref="taxon:2080578"
     Protein         1..485
                     /product="amino acid permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=52097
     Region          16..474
                     /region_name="AA_permease_2"
                     /note="Amino acid permease; cl45918"
                     /db_xref="CDD:459263"
ORIGIN      
        1 mtsraiqtea qhprgdetgd gglrrglksr hlqllaigga igtglflgsg ttislagpsi
       61 ifvyaivgfa lffvmralge lllsnlgykt fgdvaadlig pwagyvvawt ywlawvitvi
      121 adivaitgyv affndgipaw vpaiataigl lllnlqpvka fgetefwfai ikvvailali
      181 avgivllvtg ftsadgvtas vshlwdqggm fpfgisgfil gfqmgvfafv gielvgtasa
      241 eaedpeknlp kainsvvvri lvfyvgalvi imsvtpwnli epgvspftsm feligfpaaa
      301 ivvnlvvlts aassansgfy sstrmlygla kdgqatrrfg llnargvptq gvffttaflf
      361 aalpvlalgd nvmaaftvvt svsslnfiat wtfilvsylm frkkrpelhe askfkmpggr
      421 fmpwvvlaff vfilvalflg edtraglivl pfwflglglm wrfviskrve rarveersps
      481 qseka
//
LOCUS       WP_258067585             521 aa            linear   BCT 02-MAR-2025
DEFINITION  cryptochrome/photolyase family protein [Pseudoclavibacter sp.
            RFBI5].
ACCESSION   WP_258067585
VERSION     WP_258067585.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. RFBI5
  ORGANISM  Pseudoclavibacter sp. RFBI5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016158.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04244.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Pseudoclavibacter sp. RFBI5"
                     /db_xref="taxon:2080578"
     Protein         1..521
                     /product="cryptochrome/photolyase family protein"
                     /calculated_mol_wt=59037
     Region          4..511
                     /region_name="COG3046"
                     /note="Uncharacterized conserved protein related to
                     deoxyribodipyrimidine photolyase [General function
                     prediction only]"
                     /db_xref="CDD:442280"
ORIGIN      
        1 mfpnqlfeeh laapvgtrfv liehellfrq yrfhshklvl hraslarfak rlighgfave
       61 ylesrkelps krqlaelirr eaprrvtwfd vvddwlerdl lgaleaggyt wsgddelesp
      121 nfltgraeid awfsgndarm hafytwqrrr lgllldadge plggrwsfda enrkklprgy
      181 vppkvarfeg hpvlqregtf nldallgdep aagsaeprna dveeaiawvg sefpdapgdp
      241 ttfawptdad eaqrhlaefv rerlrdfgpy edaissehpf lnhglltpal niglldprqv
      301 vqaaldaadt etplaslegf vrqvigwrey mratyqvrgr elrtsnaldh hgrltpgwwq
      361 gttglepvdl visrvletgy ahhierlmvl gnamsllrih pdevyrwfme lfvdaydwvm
      421 vpnvyamsqf aagadittkp yvsgsnylrk msdlpagdwt arwdalywaf vddhravfar
      481 nprtqmtval ldrmepekra ehlataaeil rpsaagadad g
//
LOCUS       WP_258067603             215 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Rathayibacter sp. AY1G9].
ACCESSION   WP_258067603
VERSION     WP_258067603.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1G9
  ORGANISM  Rathayibacter sp. AY1G9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 215)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Rathayibacter sp. AY1G9"
                     /db_xref="taxon:2080565"
     Protein         1..215
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=22614
     Region          1..199
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mtettprrvl lvedqqmirr glvmllstve gvvvsaqaen gqaalhilrt tevdvvvtda
       61 rmpvmggvel aaecaqlhpr lpvlllttfd ddalvqaals agasgfllkd tsveglvval
      121 daviaggmvi dprvarpavq pgrtgesplt lltrseqvva elvaegrtnr eiaaalvlae
      181 gtvknhvsal lrklglrdrt alaltlykgf rpdga
//
LOCUS       WP_258067657             475 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Pseudoclavibacter sp. RFBI5].
ACCESSION   WP_258067657
VERSION     WP_258067657.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. RFBI5
  ORGANISM  Pseudoclavibacter sp. RFBI5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Pseudoclavibacter sp. RFBI5"
                     /db_xref="taxon:2080578"
     Protein         1..475
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47762
     Region          35..464
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(42..43,46..47,50,81,131..132,134..136,139,159,
                     162..163,166,255,288..289,292..294,297,325,329,385..386,
                     390,394,410,413..414,417..418,421)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mqqdesrsta gattpsevea ggvfsprlrg stigilvsvg avafeslgva tvlpavaeel
       61 gglrgygwgl salmlasivg tvvagsdidr rgparavvvg slvfalgcll aglapgwgvf
      121 vaaralqgfg vgaimayays lvglaypprl qavmfaflss awtipsllgp vfagvlttvl
      181 dwrvvfwtia pitilllplv lpgarrvsag prvrsgrlfs apvwfsvlla agtgavlfgl
      241 evdalplmla llivglvaav vglrrtlpvg sfrarrgapa gvvvrfilcg vyfgseaflp
      301 lgltsihgld vtiaglglaa galawtagsf vqaridaarp gqrarstrvg mlvllggqll
      361 mgaavalpav wpgwavvgwg iagigmgiaf nastaatvsa tptsaagsis aslqlaqtla
      421 taviaglgga avarlgattp aflavfgsta alalvgvwva grlrgqvaea gdrrr
//
LOCUS       WP_258067699             467 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rathayibacter sp. AY1D9].
ACCESSION   WP_258067699
VERSION     WP_258067699.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D9
  ORGANISM  Rathayibacter sp. AY1D9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Rathayibacter sp. AY1D9"
                     /db_xref="taxon:2080548"
     Protein         1..467
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47172
     Region          25..373
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(28..29,32..33,36,67,117..118,120..122,125,145,
                     148..149,152,270,273..274,277..279,282,310,314,367..368,
                     372)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mrsrdrrgit saplllttig ttslvflcaf eslavttimp ivsadldgra lyplafaatl
       61 aaavvgmvaa gssadrrgpt pslvvaillf tlglvaagaa qampvfvaar llqglgsggi
      121 tvtlyvlvar vypselhpri fgafaaawvv pslvgplvag vvaelaswhw vffgvvalva
      181 lasaaiaptl rsleprerlp fdrravgria ravvvsagvv vlstsaelap dlagllaaaa
      241 vvvvvvavra llpagtlrar gvlpsvillr alvaaaffgt evylplllse qyglppwlsg
      301 amltagavsw algsniqgrp gtrlshggam rlgtslvlag igvvllvtvl alspivagvg
      361 wflagggmgt mfprmgtmtl alsapgregf nssalqiads tgasvslalt gllaaavtgl
      421 igagtgvfaa tfsyaaliav vavglagrld gllrregrre paeqaql
//
LOCUS       WP_258067739             319 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY-family carbohydrate kinase, partial [Rathayibacter sp. AY1D9].
ACCESSION   WP_258067739
VERSION     WP_258067739.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D9
  ORGANISM  Rathayibacter sp. AY1D9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 319)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 319)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02782.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Rathayibacter sp. AY1D9"
                     /db_xref="taxon:2080548"
     Protein         <1..319
                     /product="FGGY-family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <22..255
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 lpavlpagag segaggveqe ralggeragv gapacppegd agtgmvatns vaprtgnvsa
       61 gtsifamvvl egplesvhhe ldlvatpagd lvamvhcnng aselagwvgl fsrfaaasgg
      121 psdsdavygt lfaealegea daggllaynh lagepiaglv egrplvvrtp dsrltlanfm
      181 raqlygvfgt lalgmrvlag egvridemfa hggmfrtagv aqrflagald apvsvaatas
      241 eggpwgmavl aayrlqsgva ldayltdqvf gdsgfetvap daddvagfsa ylkryragla
      301 veqtavetlt dpqnqgata
//
LOCUS       WP_258067742             318 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF998 domain-containing protein [Rathayibacter sp. AY1D9].
ACCESSION   WP_258067742
VERSION     WP_258067742.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D9
  ORGANISM  Rathayibacter sp. AY1D9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017959.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06197.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Rathayibacter sp. AY1D9"
                     /db_xref="taxon:2080548"
     Protein         1..318
                     /product="DUF998 domain-containing protein"
                     /calculated_mol_wt=32964
     Region          3..212
                     /region_name="DUF998"
                     /note="Protein of unknown function (DUF998); cl21592"
                     /db_xref="CDD:473918"
     Region          <207..311
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mgtrgagvlw vvsalayvga eavtasafpg ysyarnyisd lgvpevgvfq graidsplha
       61 vmnagfllqg alylaaavtt vraarggsrg lflslavvya vgiavvglvh gssasaqngi
      121 gglhvvgaam aivggnaasi vagaaarrgr apwaletvgi vlgaagllal lmlqvdtrvp
      181 gvdllpdgvw erasvyavta wqlatglrll rrpevprqpr ppqtagsgaq vrsavhrlfq
      241 lgiripeals vvvfddnpws elvtpplsvv rqpidmlarh svelvlarmq grlpeapqhi
      301 evqadlvirs scaapprr
//
LOCUS       WP_258067751             423 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Rathayibacter sp. AY1D9].
ACCESSION   WP_258067751
VERSION     WP_258067751.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D9
  ORGANISM  Rathayibacter sp. AY1D9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 423)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 423)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02771.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Rathayibacter sp. AY1D9"
                     /db_xref="taxon:2080548"
     Protein         1..423
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=45474
     Region          39..417
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(115,145,147,171,173,400..402,404,406)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mtttaptttg adaattigaa aehwsaaprp dspdawlvra eevaavlatd alerdragaa
       61 pfaevallka aglvtllgpa ehgggaqewt talrvvrtva rgdgsigqll gyhylwawaa
      121 rlvgtpeqii aveqlategd llyggavnpr dsdltvreeg delvftgrks fstggvvsdl
      181 tvlegvlegt dthlfaivpt dqegivfgrd wdslgqrlte sgsveirgvr vpwaaaagfv
      241 dkvyrplvyn tlnvpviqqv faefylgiaq galeraaqyt rertrawpyg gddkeragde
      301 wyvlegygdl qsrlwadeal idatgaalsa alhapreelt prrrgeiavr iaaakarive
      361 dglatatrvf eltgarasas svgldlywrn lrthslhdpl pykrrevgvf alldtvpeps
      421 wyt
//
LOCUS       WP_258067760             520 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Rathayibacter sp. AY1D9].
ACCESSION   WP_258067760
VERSION     WP_258067760.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D9
  ORGANISM  Rathayibacter sp. AY1D9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 520)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 520)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012234.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00004.35
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Rathayibacter sp. AY1D9"
                     /db_xref="taxon:2080548"
     Protein         1..520
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=53136
     Region          211..472
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            262..269
                     /site_type="other"
                     /note="Walker A motif"
                     /db_xref="CDD:99707"
     Site            order(263..270,325,361)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:99707"
     Site            321..326
                     /site_type="other"
                     /note="Walker B motif"
                     /db_xref="CDD:99707"
     Site            378
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:99707"
ORIGIN      
        1 mtalapalda lvlagtaagl daaavrdega rlaaavaesi rgagqdwlaa tgttggleaf
       61 ftaassgrrw rsgptdqlaa lvgagshhas ayaraltevv saasalgdpg iggiasasat
      121 aaaqlsavpg argaapttsg gaphttgrtp dgaasadlpt glpagvpgvd eilerlrrte
      181 hdgpqdepap aaapaaepas epepldppes iddllaelda ligldrvkse ikrqtqllri
      241 dtlrqaagls tptltrhlvf tgnpgtgktt varlvsriyr slgilskgvl vevdrselva
      301 gylgqtatkt aeviasargg vlfideayal aldqygaeav ttlvkdmedh rgdlvvivag
      361 ysgpmqgfld tnpglasrfs ttidfadysd delsaifgrl aasadfepte ealaafagla
      421 saqqrteafg ngrwvrnvld aaiarhawrl rdveeptlde lrillpedvv espeassspd
      481 gagdddegav dgseeafgqv daapsgtavp vtddpeeesr
//
LOCUS       WP_258067816             565 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Pseudoclavibacter sp.
            RFBB5].
ACCESSION   WP_258067816
VERSION     WP_258067816.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. RFBB5
  ORGANISM  Pseudoclavibacter sp. RFBB5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10170721
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Pseudoclavibacter sp. RFBB5"
                     /db_xref="taxon:2080574"
     Protein         1..565
                     /product="ABC transporter substrate-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=59871
     Region          44..545
                     /region_name="PBP2_clavulanate_OppA2"
                     /note="The substrate-binding domain of an oligopeptide
                     binding protein (OppA2) from the biosynthesis pathway of
                     the beta-lactamase inhibitor clavulanic acid contains the
                     type 2 periplasmic binding fold; cd08506"
                     /db_xref="CDD:173871"
     Site            order(62,64,67,405,439,455..456)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:173871"
ORIGIN      
        1 mkkrklagvl alattsimll sacgggaape aeggstgepv aggtvhmlqn adfsyldpar
       61 gfdggvnafy rliyrgltmq aagnaedpna ivadmaeglg eqsedglkwt ytlkdglkfd
      121 ngdpitsaev kfgisrawdp eigigspylk qvidapegye gpyvtgdlpt ietpdektiv
      181 fnlkapfpef dnvlaqanav pfptgtgggs efindiiasg pytlesytpg tainlvrnen
      241 wdpetddvrk aypdawqfni gldpatider miagqssdin aiagvvqaas lprlqtpqlq
      301 drtalspayc ttymsmnttk eafkdvkvrq avnyaldraa iqnasggnql adpataiipa
      361 avnghldydl ypsegddftg nateaqklld eagvgdgfsf tldvrsnpka qaqaeaiqqa
      421 lsplgidval nvidvstyye tigttsqqnd aaitgwcpdw assastflpp lfdgrnitdk
      481 gnsnlaqind paineridei kamtdldaan tawgeldkqi melapiaplv lekgvflpge
      541 niagyypsts ltdltivgla dpsrg
//
LOCUS       WP_258067851             110 aa            linear   BCT 02-MAR-2025
DEFINITION  sterol carrier family protein [Pseudoclavibacter sp. RFBB5].
ACCESSION   WP_258067851
VERSION     WP_258067851.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. RFBB5
  ORGANISM  Pseudoclavibacter sp. RFBB5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
REFERENCE   1  (residues 1 to 110)
  AUTHORS   Shahine,A., Littler,D., Brammananath,R., Chan,P.Y., Crellin,P.K.,
            Coppel,R.L., Rossjohn,J. and Beddoe,T.
  TITLE     A structural and functional investigation of a novel protein from
            Mycobacterium smegmatis implicated in mycobacterial macrophage
            survivability
  JOURNAL   Acta Crystallogr D Biol Crystallogr 70 (Pt 9), 2264-2276 (2014)
   PUBMED   25195741
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036504.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17844.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Pseudoclavibacter sp. RFBB5"
                     /db_xref="taxon:2080574"
     Protein         1..110
                     /product="sterol carrier family protein"
                     /calculated_mol_wt=11794
     Region          15..107
                     /region_name="SCP_3"
                     /note="Bacterial SCP ortholog; pfam17844"
                     /db_xref="CDD:465530"
ORIGIN      
        1 mtawsearae grptpradaa tavrytlqal edrapgasve vrvppfgavq cvegpghtrg
       61 tppnvielda dtwlelatgr tswqeafean rvrasgtrad vsawlplvrr
//
LOCUS       WP_258067878             280 aa            linear   BCT 02-MAR-2025
DEFINITION  ROK family protein [Rathayibacter sp. AY1B5].
ACCESSION   WP_258067878
VERSION     WP_258067878.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1B5
  ORGANISM  Rathayibacter sp. AY1B5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Rathayibacter sp. AY1B5"
                     /db_xref="taxon:2080530"
     Protein         1..280
                     /product="ROK family protein"
                     /calculated_mol_wt=29280
     Region          14..253
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mtqphdgllp rfavgvdigg tsikaslvdv ttgeraarrf avanplgkep edfaeaiagi
       61 vrdvspiagt svgvgfpgiv rggvvrqtth vsqrwvglda qallseatgv dvvvvndada
      121 agvaerefga mrgregllll ttlgtgigta lvhegvvipn selghlhidg pdfepqvgfs
      181 avrregitle ewagrlsvyy rhlemllspq lfviggaaah vfdefarfld igteivparf
      241 gndagftgaa mvavspdrla pwyrstrgar ldpgapaiad
//
LOCUS       WP_258067895             148 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Rathayibacter sp. AY1B5].
ACCESSION   WP_258067895
VERSION     WP_258067895.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1B5
  ORGANISM  Rathayibacter sp. AY1B5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 148)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 148)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Rathayibacter sp. AY1B5"
                     /db_xref="taxon:2080530"
     Protein         1..148
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=15882
     Region          <3..119
                     /region_name="XerD"
                     /note="Site-specific recombinase XerD [Replication,
                     recombination and repair]; COG4974"
                     /db_xref="CDD:443999"
ORIGIN      
        1 mtkqtrgrdi rhvpilqalt palehltagp epedrsltgp rggvhttasv rdattgdqlv
       61 adlgltsltr hclrntgatw radagiplhv lqdilgrtsi etthgclhad trhltdaaac
      121 adaflvghen rerqspepst rttpprpr
//
LOCUS       WP_258067910              91 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar-binding domain-containing protein [Rathayibacter sp. AY1B5].
ACCESSION   WP_258067910
VERSION     WP_258067910.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1B5
  ORGANISM  Rathayibacter sp. AY1B5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016114.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04198.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Rathayibacter sp. AY1B5"
                     /db_xref="taxon:2080530"
     Protein         1..91
                     /product="sugar-binding domain-containing protein"
                     /GO_function="GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /calculated_mol_wt=9042
     Region          <16..78
                     /region_name="DeoR"
                     /note="DNA-binding transcriptional regulator LsrR, DeoR
                     family [Transcription]; COG2390"
                     /db_xref="CDD:441955"
ORIGIN      
        1 mrrrsapslr grcasaclgf fhadgsales pgsdrmvrvs redlaavpha vgvavgaekt
       61 asiigavrgs lidtpvtdaa tvaaaailat l
//
LOCUS       WP_258067933             307 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-dependent oxidoreductase [Rathayibacter sp. AY1B5].
ACCESSION   WP_258067933
VERSION     WP_258067933.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1B5
  ORGANISM  Rathayibacter sp. AY1B5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Dengler,U., Niefind,K., Kiess,M. and Schomburg,D.
  TITLE     Crystal structure of a ternary complex of D-2-hydroxyisocaproate
            dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate
            at 1.9 A resolution
  JOURNAL   J Mol Biol 267 (3), 640-660 (1997)
   PUBMED   9126843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02826.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Rathayibacter sp. AY1B5"
                     /db_xref="taxon:2080530"
     Protein         1..307
                     /product="NAD(P)-dependent oxidoreductase"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
                     /calculated_mol_wt=31821
     Region          6..307
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(136..138,140,158..160,190..191,218)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:240631"
ORIGIN      
        1 mtvprvavlp rpkpvfaeav esgggvvvgl despdallwl sygrtdelaa vleehptirw
       61 vqlpwagvdv fapvlaasra dvvwtsakga daepvaehal alvlallrsl peraraeswg
      121 pkkavtlhra svvivgaggi arellrllav fdcrvtivrr gdepvegaar tlpasrlaea
      181 aadadvlvla aaatagterm idagllarlp aravlvnvar gslidtdalv aalaegrlag
      241 aaldvtdpep lpdghplwse prclitphsa dtpeitapll aervranvaa caagepfvgr
      301 vdpgsgy
//
LOCUS       WP_258067964             386 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rathayibacter sp. AY1B5].
ACCESSION   WP_258067964
VERSION     WP_258067964.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1B5
  ORGANISM  Rathayibacter sp. AY1B5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Rathayibacter sp. AY1B5"
                     /db_xref="taxon:2080530"
     Protein         1..386
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=37931
     Region          43..348
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(57,108..109,111..113,116,136,139..140,143,218,
                     221..222,225..227,230,257,261,310..311,315,319,335,
                     338..339,342..343,346)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mrdrlatpsl lahavliqav afllrpaavy qaiqldvpsw algalgasfa lvpllialpt
       61 gglvdrvgar avmavgslva vgaaavllla ggsvagllvg iallgaghlg cvvgqqtvva
      121 ggtggtrlds rfgyytfaas lgqaigpafi pvlaggsvrp dpaplflvgg ilavlllvst
      181 agirspsprg paaeeetapg stlgllrvpg laralltsat vvaavdltvv ylpalgaerg
      241 lpagvvgall tvralasmas rlllgaatar lgrtrvmmgg ilisalclvl valpaptall
      301 fvavaalglg lgigqpitms wliertpadr hgralalrla gnrlglialp sllgvlaaaa
      361 gaggvligtg aavgatllll rgvrld
//
LOCUS       WP_258068042             288 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Rathayibacter sp. AY1B5].
ACCESSION   WP_258068042
VERSION     WP_258068042.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1B5
  ORGANISM  Rathayibacter sp. AY1B5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Rathayibacter sp. AY1B5"
                     /db_xref="taxon:2080530"
     Protein         1..288
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=30009
     Region          5..287
                     /region_name="PRK12748"
                     /note="3-ketoacyl-(acyl-carrier-protein) reductase;
                     Provisional"
                     /db_xref="CDD:237189"
ORIGIN      
        1 msallplqgr talvtgvsrr rgigfavaak laslgahlvv hhhrphdldl pwggddldav
       61 rselrahlte garfadvaad ladpstvpgl iataagltgt ldvlvcnhak sgddgsildm
      121 tperltafwd vntrstlllt aefarlrapr sdgprrpgdr ivgagpypra qghvfwmtsg
      181 qihgamrgev ayaaskaala gvtatvaael lelgivlnti dpgpvntgyl dpettdrsle
      241 dleehvastp fgrvgtpadp aeliawlats agswvvgqvl ttdggfsl
//
LOCUS       WP_258068124             403 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Rathayibacter sp. AY1A2].
ACCESSION   WP_258068124
VERSION     WP_258068124.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1A2
  ORGANISM  Rathayibacter sp. AY1A2
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 403)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012417.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00190.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Rathayibacter sp. AY1A2"
                     /db_xref="taxon:2080520"
     Protein         1..403
                     /product="cupin domain-containing protein"
                     /GO_function="GO:0045735 - nutrient reservoir activity
                     [Evidence IEA]"
                     /calculated_mol_wt=44207
     Region          32..393
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     Site            order(87,97..98,100,102,119,121,123,125,150,152,172,174,
                     176,202)
                     /site_type="other"
                     /note="intramolecular domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:380438"
     Site            order(103,111,114,116,120,159,173,175)
                     /site_type="active"
                     /db_xref="CDD:380438"
ORIGIN      
        1 mepddstaph hetpgfgdpd lpqegivnte gdpsantmtg pqnrvleglf pnqiaapatd
       61 istqpffwss fnisprrvqr ggwareltqa dfaisneiag vnmyleaggi relhwhqsae
      121 walmtkgncr ittlsrtgrp svddvqegdl wylppglphs lqglgpdgae fvlafddgeq
      181 sesntllltd wfahtppdvl aknfgvaqev frdiplhdlw ifpgdvpgdl qadraaagvq
      241 dgdeavifrl srsepayqns ggriqiadst nfpasrtvsa alttvepgsm relhwhpnad
      301 ewqyylrgsa rmtvfntgph anttdfhagd vgvvrrnfgh yventgddtl vyietfkssr
      361 yeevslaqwl shlppslvaq hlnipeevla tfplgtqgit plr
//
LOCUS       WP_258068158             514 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rathayibacter sp. AY1A2].
ACCESSION   WP_258068158
VERSION     WP_258068158.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1A2
  ORGANISM  Rathayibacter sp. AY1A2
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Rathayibacter sp. AY1A2"
                     /db_xref="taxon:2080520"
     Protein         1..514
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=51708
     Region          23..470
                     /region_name="PRK14995"
                     /note="SmvA family efflux MFS transporter"
                     /db_xref="CDD:184957"
ORIGIN      
        1 msartapvst hdtagaadrv grrawvalav lmlpvllvsv dntvlnfalp siaedlgpsg
       61 tellwivday plvlagllva mgslgdrvgr rrlllvgavg faavsvvaaf aptaaaliga
      121 raalgffgam lmpstlsllr svfpdrdqrr laiaiwatgf avgsgigplv ggvllehfpw
      181 gsvfllavpv llplvvlvpi lvpesrdpqp gpvdvvsill slatmapvvy avksfaehgi
      241 davgiaalvv gvvsgvlfvr rqqrraspml dlslfrrgsf saaivvnlls vtalvgglff
      301 lsqhlqlvvg lspleaglvl vpglavmila glgvvpiarr vaprlvvpag llvsavgyil
      361 lalgseapgg asalavavaf aflglgigaa etvsnelila napadkagaa savsetayel
      421 gavlgtatlg tvltavyrgg vvlpegldaa qaqragetlg gavsvagelp adsaaslvas
      481 asaafdsgvg wsawlgvvlv laaaavgawr lrrs
//
LOCUS       WP_258068246             163 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: three component ABC system middle component
            [unclassified Rathayibacter].
ACCESSION   WP_258068246
VERSION     WP_258068246.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 163)
  AUTHORS   Krishnan,A., Burroughs,A.M., Iyer,L.M. and Aravind,L.
  TITLE     Comprehensive classification of ABC ATPases and their functional
            radiation in nucleoprotein dynamics and biological conflict systems
  JOURNAL   Nucleic Acids Res 48 (18), 10045-10075 (2020)
   PUBMED   32894288
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039805.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20131.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..163
                     /product="three component ABC system middle component"
                     /calculated_mol_wt=17584
     Region          6..163
                     /region_name="MC3"
                     /note="ABC-three component (ABC-3C) system Middle
                     Component 3; pfam20131"
                     /db_xref="CDD:466298"
ORIGIN      
        1 melpswdsrh psiatmlnpa litvvlaaaa nryqaegssg mpwelsflva pmsfhhdtrk
       61 alpsridshl pkwvernpvv laglaprara maphvreglr yglrtptlqi daegqlhgel
      121 fgrlprknga dvpdmvkaas flgkwfatvg ssatvfailg vtp
//
LOCUS       WP_258068286             390 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Pseudoclavibacter sp.
            RFBB5].
ACCESSION   WP_258068286
VERSION     WP_258068286.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. RFBB5
  ORGANISM  Pseudoclavibacter sp. RFBB5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
REFERENCE   1  (residues 1 to 390)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 390)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 390)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Pseudoclavibacter sp. RFBB5"
                     /db_xref="taxon:2080574"
     Protein         1..390
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=41913
     Region          10..389
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(105,135,137,168,170,367..369,371,373)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mpspsaephd lvdfdvllse eelasrrrvr llvdehvrpr iaswyedavf pidlvpvlas
       61 egllgmhlsg ygcagrsave ygiaaaelea gdsgirtfvs vqgslamsai wkhgsedqkn
      121 ewlprmaage vigcfgltep eagsdpgtmr tfarrdgddw visgakrwig laslaqlavi
      181 waqtddgvrg flvptasagf satpigpkls mrasvqcdiv ldsvrvpada mlpgarglrg
      241 pfeclneary giawgvmgaa rdsfeaalay agerqpfnrp lsgfqltqqk lvdmaleink
      301 gfllalqlgr lkdagriqph hisagklnnt reaiaiarea rtilggngit ldysplrhan
      361 nlesvrtyeg tdeihtlvlg skltgipafr
//
LOCUS       WP_258068307             330 aa            linear   BCT 02-MAR-2025
DEFINITION  YqaJ viral recombinase family protein [Pseudoclavibacter sp.
            RFBB5].
ACCESSION   WP_258068307
VERSION     WP_258068307.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. RFBB5
  ORGANISM  Pseudoclavibacter sp. RFBB5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
REFERENCE   1  (residues 1 to 330)
  AUTHORS   Vellani,T.S. and Myers,R.S.
  TITLE     Bacteriophage SPP1 Chu is an alkaline exonuclease in the SynExo
            family of viral two-component recombinases
  JOURNAL   J Bacteriol 185 (8), 2465-2474 (2003)
   PUBMED   12670970
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021128.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09588.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Pseudoclavibacter sp. RFBB5"
                     /db_xref="taxon:2080574"
     Protein         1..330
                     /product="YqaJ viral recombinase family protein"
                     /calculated_mol_wt=37094
     Region          <20..>178
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          114..>293
                     /region_name="COG5377"
                     /note="Phage-related protein, predicted endonuclease
                     [Mobilome: prophages, transposons]"
                     /db_xref="CDD:444142"
ORIGIN      
        1 mfrpshdvde tswfrepqea pksrrrdrel ygpaalmdya sapaptsapr veslprfyts
       61 etrtapattp lsasevgvwr argpasaets aielpatpev eamsahllrv ladsndraaw
      121 lkaradgvta tdaarlatps svkqvvkdkv mgnsfngnay tdfgrqrepe iarwvlerhg
      181 ipasgllfha easkshlatp dglhcdeegr illaeikttn kvwkriprsy mrqiwwqqyv
      241 lgaertlmvw erhqdfivvd repkfvwidr deeeiaklvt lanevlkdve kyrgefaqys
      301 tgnaqpfqgy gnthsssdyt qsfydaetya
//
LOCUS       WP_258068367             118 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Rathayibacter sp. AY1E2].
ACCESSION   WP_258068367
VERSION     WP_258068367.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1E2
  ORGANISM  Rathayibacter sp. AY1E2
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 118)
  AUTHORS   Todone,F., Vanoni,M.A., Mozzarelli,A., Bolognesi,M., Coda,A.,
            Curti,B. and Mattevi,A.
  TITLE     Active site plasticity in D-amino acid oxidase: a crystallographic
            analysis
  JOURNAL   Biochemistry 36 (19), 5853-5860 (1997)
   PUBMED   9153426
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013434.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01266.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Rathayibacter sp. AY1E2"
                     /db_xref="taxon:2080550"
     Protein         1..118
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=12678
     Region          17..>107
                     /region_name="soxA_mon"
                     /note="sarcosine oxidase, monomeric form; TIGR01377"
                     /db_xref="CDD:130444"
ORIGIN      
        1 mtrevvvvga glvgaatara ltergdrvvl veqferghdr gsshgetrif rrgyleddyr
       61 altgrvgraw arleaetgrr llhpvgaidh gdpavlaave avllrdgtpv vrieadea
//
LOCUS       WP_258068368             187 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Rathayibacter sp. AY1E2].
ACCESSION   WP_258068368
VERSION     WP_258068368.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1E2
  ORGANISM  Rathayibacter sp. AY1E2
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 187)
  AUTHORS   Todone,F., Vanoni,M.A., Mozzarelli,A., Bolognesi,M., Coda,A.,
            Curti,B. and Mattevi,A.
  TITLE     Active site plasticity in D-amino acid oxidase: a crystallographic
            analysis
  JOURNAL   Biochemistry 36 (19), 5853-5860 (1997)
   PUBMED   9153426
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013434.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01266.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Rathayibacter sp. AY1E2"
                     /db_xref="taxon:2080550"
     Protein         1..187
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=19356
     Region          <3..172
                     /region_name="soxA_mon"
                     /note="sarcosine oxidase, monomeric form; TIGR01377"
                     /db_xref="CDD:130444"
ORIGIN      
        1 mlttdgalda davvvaggsw tpplveglvr aagrrlpplr vtqeqpahfa tdlpldswps
       61 fahhraglpv vyglatpgvg vkvgehstgv vvdpdertfe pepgalarlv gyvaewipgv
      121 daasaapisc lydstpdedf vidrvgrvtl atgfsghgft fgpvlgella dlvaggaare
      181 rfqllpa
//
LOCUS       WP_258068379             454 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Rathayibacter toxicus].
ACCESSION   WP_258068379
VERSION     WP_258068379.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter toxicus
  ORGANISM  Rathayibacter toxicus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Rathayibacter toxicus"
                     /db_xref="taxon:145458"
     Protein         1..>454
                     /product="DUF6531 domain-containing protein"
     Region          286..358
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
ORIGIN      
        1 madvgaided vlfshdlasr vsvaalgvvs viegqvgsra shvvgarkdf rglfaevfae
       61 nasvaaadgv elvsrlrelv aaverlseea eaeqkrrvva rewqrkkner nvlelahdtf
      121 fgeerppvgp alepskltvs dpvsgvrqtp asgqggsgvs sacpadlhaf argyreldvs
      181 lrekldnlrg pltdfttrcq wgrlsadgvv agceqwlaan eqdarwadvl asafaaagge
      241 grvsslanga vmtalssagv svrredivis ppqafgappt tgyaddpvnt stgnfletev
      301 dlgcvgasam lrfartynsl deglgafgrg wsseaevclr vaddgatmvl pdgrevvfar
      361 qgegwdrasg eslwlgrrdg ylvvsgndgr ewvfspggtw lsasagpgtr ieverddegr
      421 lvvlrhergr sirvlwsger ivaleasdgr rvqf
//
LOCUS       WP_258068451            1001 aa            linear   BCT 02-MAR-2025
DEFINITION  immunoglobulin-like domain-containing protein [Rathayibacter sp.
            AY1E2].
ACCESSION   WP_258068451
VERSION     WP_258068451.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1E2
  ORGANISM  Rathayibacter sp. AY1E2
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042837.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20578.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Rathayibacter sp. AY1E2"
                     /db_xref="taxon:2080550"
     Protein         1..1001
                     /product="immunoglobulin-like domain-containing protein"
                     /calculated_mol_wt=103096
     Region          <202..268
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          295..364
                     /region_name="aBig_2"
                     /note="Atrophied bacterial Ig domain; pfam20578"
                     /db_xref="CDD:466727"
     Region          377..467
                     /region_name="aBig_2"
                     /note="Atrophied bacterial Ig domain; pfam20578"
                     /db_xref="CDD:466727"
     Region          504..819
                     /region_name="GH43_Bt3655-like"
                     /note="Glycosyl hydrolase family 43 protein such as
                     Bacteroides thetaiotaomicron VPI-5482 arabinofuranosidase
                     Bt3655; cd08983"
                     /db_xref="CDD:350097"
ORIGIN      
        1 mrrrspeppa aaprrrarsl flsalactsv altgalvpvs aqavdvpapt ahydmshags
       61 alldisgngr natltgltda sfanaggdqv arfkndgyas lpqglvtgad nafaveytvk
      121 tqttanqfgw vigdgvgpwn ttqlgnhvfv nprnpdgsps gqvlagirvk eptnngetrm
      181 pfggtlnpgf ttltlvgtgt gsstvltlyr dgtqistant tksmasivpt gstlgylgrs
      241 lysgdalvta dvtdvkfwdt sltaeqvass mptaaakasa tsallrsdiq pvllagnpsl
      301 tqvssnltlp asssgvpltw tssnsavvsa tgvvsrsiaq ntpvtltatt aqgatiafev
      361 vvlapsindd ldalklatrt tenlplavkg arngtditwt ssdpalvtpt ntsyaapavg
      421 aadpyrgggv vtrpaygsgd rtvtltatat lngvtetraf tltvaelgrt apdagyasay
      481 fksdgdekiy qaatsgndff tfspvnggka vitsttdtkg lrdpfilrsh ngdkyymvat
      541 dlciscgtgw gdaqskgslk ievwestdlv qwtrtngadt gitvnqpaag mtwapeaywd
      601 dalqsyvvff ssrlysdatk tnndklysrv fsvitrdfrt ftappatwqd tgyaridsti
      661 tkigdyyyrf tkneeggaag tleagkdifl ekskvltagt tssnwsadpn ttwqltdtrm
      721 tsletgqage gpeiiklnag dpndttgtgd gyaflvdnyg dggykaflts gaaiagssqt
      781 nrlsqsadwn vspksraglp asprhgafvs vpqtvltamk nwtgvtavds tttltadgrt
      841 vtatvaaadk gdvvgsvtft ggswtstvpl sggsasvsvp agvtgvtasy tgyadklvrt
      901 svsaavpldt lelvpavatr ciagkivlta tvkntdtaaa dvtitsaygs ksftavapgs
      961 sasaafttrl asmpagtvtv tgsatgqpaf tatvpvaaar c
//
LOCUS       WP_258068457             139 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: TadE/TadG family type IV pilus assembly protein
            [unclassified Pseudoclavibacter].
ACCESSION   WP_258068457
VERSION     WP_258068457.1
KEYWORDS    RefSeq.
SOURCE      unclassified Pseudoclavibacter
  ORGANISM  unclassified Pseudoclavibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
REFERENCE   1  (residues 1 to 139)
  AUTHORS   Kachlany,S.C., Planet,P.J., DeSalle,R., Fine,D.H. and Figurski,D.H.
  TITLE     Genes for tight adherence of Actinobacillus actinomycetemcomitans:
            from plaque to plague to pond scum
  JOURNAL   Trends Microbiol 9 (9), 429-437 (2001)
   PUBMED   11553455
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019428.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07811.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="unclassified Pseudoclavibacter"
                     /db_xref="taxon:2615177"
     Protein         1..139
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /calculated_mol_wt=14114
ORIGIN      
        1 mtstsrphpr gvmrdetgsa vaewvmvsam lllltltvlq vgfalhvrtt lldaagegar
       61 haglfgggle agetraadli tvaigagyaq dvtatatetd gsptiavtvr splpliglig
      121 lpdalevtgh aptetlete
//
LOCUS       WP_258068475             445 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rathayibacter sp. AY1E2].
ACCESSION   WP_258068475
VERSION     WP_258068475.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1E2
  ORGANISM  Rathayibacter sp. AY1E2
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Rathayibacter sp. AY1E2"
                     /db_xref="taxon:2080550"
     Protein         1..445
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45085
     Region          2..388
                     /region_name="PRK10504"
                     /note="putative transporter; Provisional"
                     /db_xref="CDD:182502"
ORIGIN      
        1 mlvagcffme nldativtta apaiaadlgv dsaavsitvt aflltvavli pasgwlserf
       61 gvrrvfttai avftlasllc alsptlpllv garvlqgvgg almvpvgrla vlratpregi
      121 ihaiailvwp glvapviapf lggllttvas whwiflinlp lgvvafaiar rivpdtaesa
      181 pppldvtglv lvavglgalv gaaglltgse ldgravapll vgavvtalav rhlrraehpl
      241 vrldafrfrt frvanasgsl yratvnavpf llpllfqdaf gwspvqagsv vlalfagnla
      301 ikpattpllr rlgfrgvlva asavgaacma amaflepatp valvvallvl sgvarsagft
      361 ayntvtfaev pqegmsgant lnattqqiaa glgvavgava lavgtaigpg lvpyrvafla
      421 lavltlvpla aaarlprdsg salta
//
LOCUS       WP_258068513             558 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Arthrobacter sp. N199823].
ACCESSION   WP_258068513
VERSION     WP_258068513.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. N199823
  ORGANISM  Arthrobacter sp. N199823
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 558)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 558)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 558)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Arthrobacter sp. N199823"
                     /db_xref="taxon:2058895"
     Protein         1..558
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=59477
     Region          39..453
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(157,196,198,229,231,436..438,440,442)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mtatdagmtg gpltsgpaas hdtrrvlnqp pprvdineft lniplqeyls svgeaegvgt
       61 leasgsvvgs gqfqddarla hknppilhth nkygqridev eyhpayhrii gaavaagaht
      121 sawevpgkga nalraaqfml faqvepghac pismshaavd tlqlapdlag ewlprlyspq
      181 yspelalgkp galfgmamte kqggsdvran ttraveaggh hlltghkwfc sapmsdaflv
      241 laqedaglgc flvprvlpdg trntfllqrl kdkvgnrsna ssevefadta gwrigdpgrg
      301 vraimgmvgr trldcilgta agmrqsvaea vwharhrraf garlidqpam tnvladlale
      361 seaativsmr lsrafdddag psersfrrla tavakywvck rgpnhayeam eclggngyte
      421 dfplamryre qpvmaiwegt gnvialdvlr amgtdpesvd affaelrias gsalvfddfv
      481 aalreevavv akaphdfagq arnlvermal alqaallirf apaavseafv vsrlgpgrsf
      541 nygglpsssd vagivara
//
LOCUS       WP_258068516             411 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rathayibacter tritici].
ACCESSION   WP_258068516
VERSION     WP_258068516.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter tritici
  ORGANISM  Rathayibacter tritici
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Rathayibacter tritici"
                     /db_xref="taxon:33888"
     Protein         1..411
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=41669
     Region          32..348
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(34..35,38,70,120..121,123..125,128,147,150..151,154,
                     222,225..226,229..231,234,258,262,313..314,318,322,337,
                     340..341,344..345,348)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mtpslhspaq gsilkqplav wavafaavia fmgiglvdpi lpaiaeslra tptetsllft
       61 sylvitgvvm fftswlssri gakktlmigl vlivvfaala gtagsvegvi gfragwgfgn
      121 alfistalst ivgaasggss aaivlyeaal gigiaigpll ggllgsvswr gpffgtavlm
      181 avgviaiatl lredgptpap tplsapfaal rvpairtlag aalfynigff vllaytpypl
      241 gldemglgft ffgwglgvav tsvfvapllt rrlprtvvlr svllllaldl vagglvissr
      301 vgliaciivg glllgvvntv ltecvmeate lprsvassay sgvrflggai appaasalaa
      361 aispafpmya aagavavaal ivllgrrtla radahepepe lveaqaitfg e
//
LOCUS       WP_258068538             528 aa            linear   BCT 02-MAR-2025
DEFINITION  FtsK/SpoIIIE domain-containing protein, partial [Rathayibacter
            tritici].
ACCESSION   WP_258068538
VERSION     WP_258068538.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter tritici
  ORGANISM  Rathayibacter tritici
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 528)
  AUTHORS   Begg,K.J., Dewar,S.J. and Donachie,W.D.
  TITLE     A new Escherichia coli cell division gene, ftsK
  JOURNAL   J Bacteriol 177 (21), 6211-6222 (1995)
   PUBMED   7592387
REFERENCE   2  (residues 1 to 528)
  AUTHORS   Wu,L.J. and Errington,J.
  TITLE     Bacillus subtilis SpoIIIE protein required for DNA segregation
            during asymmetric cell division
  JOURNAL   Science 264 (5158), 572-575 (1994)
   PUBMED   8160014
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013727.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01580.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Rathayibacter tritici"
                     /db_xref="taxon:33888"
     Protein         <1..528
                     /product="FtsK/SpoIIIE domain-containing protein"
                     /GO_function="GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <35..520
                     /region_name="T7_EssCb_Firm"
                     /note="type VII secretion protein EssC, C-terminal domain;
                     TIGR03928"
                     /db_xref="CDD:274860"
ORIGIN      
        1 ntshgnwtsr aflsviavil piprwsrkng apqsydfdla kaghtvlfgs pgfgkstvlq
       61 tltiglaqas tpeqvqvnli dfgnngllpl rglphvadiv tleeseklgk mlegvgslla
      121 arkqsfknag vanleqysak tgrrlpvvvn vldgydnlta ndrrkeqidd lllqvlrega
      181 glgvylvmsa srvggvrvnm lsnistklsl ylndeselaq lmgrerllqv dtlgrgqviv
      241 etptaiqfyq papgetsaet laaleaqvsa idaawtgkrp aripmvprel tpeaftgfst
      301 vrtvestggv plalskattd argflprsqp fflfaakdde qellfqqtll tqggrvntsf
      361 lvidfderfd ealectplpa nfsyitsksd aseivagiva ylslnkqkaq gtplvlvian
      421 lpdfiastgv kpddfvlavk ntfkagldfm ifsrhdylak sfdpvpkllr eqkftgfvga
      481 raydsplvkg mgtstepeps idepyfvlrg gsafekvklp qaqeqahd
//
LOCUS       WP_258068563             450 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Arthrobacter sp. N199823].
ACCESSION   WP_258068563
VERSION     WP_258068563.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. N199823
  ORGANISM  Arthrobacter sp. N199823
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Arthrobacter sp. N199823"
                     /db_xref="taxon:2058895"
     Protein         1..450
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47356
     Region          50..419
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(75,124..125,127..129,132,152,155..156,159,256,
                     259..260,263..265,268,298,302,347..348,352,356,372,
                     375..376,379..380,383)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mdtkrevinv nfaayreila vgsvrrlliv amlarvphaa agvlltlhvv ksmeldyaaa
       61 gliaasvtig iaigapwrgr mvdryglrra lipsviaevt vwgtapflnf qlllvaafig
      121 glfavpifsv vrqalgvmvp peqrrtayal dsmggeltfm igpaagvlla tnntvlglvv
      181 igvsaslagl flmwfnpptr tghkgsyvav gdavtelpdp vedqqapdlt gknvmarwwe
      241 nthhnlrwvn iavlailats lgaglvltgv nvgmvalmnf ndstadlgiv flfwcgasiv
      301 ggivygalkq svnplwllga mavliipmgf atnawtlgll silpgllcap vltssaehia
      361 dlvsekrrge amgwygssmt ignamgapfa gvmidrigpw agfvivgaic avlaiiglia
      421 maawrrgksa vvksqqpdds ddllgepdlv
//
LOCUS       WP_258068601             780 aa            linear   BCT 02-MAR-2025
DEFINITION  GH25 family lysozyme [Arthrobacter sp. N199823].
ACCESSION   WP_258068601
VERSION     WP_258068601.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. N199823
  ORGANISM  Arthrobacter sp. N199823
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 780)
  AUTHORS   Moroz,O.V., Blagova,E., Taylor,E., Turkenburg,J.P., Skov,L.K.,
            Gippert,G.P., Schnorr,K.M., Ming,L., Ye,L., Klausen,M., Cohn,M.T.,
            Schmidt,E.G.W., Nymand-Grarup,S., Davies,G.J. and Wilson,K.S.
  TITLE     Fungal GH25 muramidases: New family members with applications in
            animal nutrition and a crystal structure at 0.78A resolution
  JOURNAL   PLoS One 16 (3), e0248190 (2021)
   PUBMED   33711051
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 780)
  AUTHORS   Martinez-Fleites,C., Korczynska,J.E., Davies,G.J., Cope,M.J.,
            Turkenburg,J.P. and Taylor,E.J.
  TITLE     The crystal structure of a family GH25 lysozyme from Bacillus
            anthracis implies a neighboring-group catalytic mechanism with
            retention of anomeric configuration
  JOURNAL   Carbohydr Res 344 (13), 1753-1757 (2009)
   PUBMED   19595298
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013357.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01183.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Arthrobacter sp. N199823"
                     /db_xref="taxon:2058895"
     Protein         1..780
                     /product="GH25 family lysozyme"
                     /GO_function="GO:0003796 - lysozyme activity [Evidence
                     IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /GO_process="GO:0016998 - cell wall macromolecule
                     catabolic process [Evidence IEA]"
                     /calculated_mol_wt=81461
     Region          29..231
                     /region_name="GH25_CH-type"
                     /note="CH-type (Chalaropsis-type) lysozymes represent one
                     of four functionally-defined classes of peptidoglycan
                     hydrolases (also referred to as endo-N-acetylmuramidases)
                     that cleave bacterial cell wall peptidoglycans. CH-type
                     lysozymes exhibit both lysozyme...; cd06412"
                     /db_xref="CDD:119374"
     Site            order(33,57,60,86,88,122,124,165,187,210,220)
                     /site_type="active"
                     /db_xref="CDD:119374"
     Region          263..516
                     /region_name="Tachylectin"
                     /note="pfam14517"
                     /db_xref="CDD:464197"
     Region          470..534
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          523..584
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          573..639
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
ORIGIN      
        1 msagrdgmar ayaetlsqaa gawvpgfgvl gmdvsgyqpy vdwqseaakg akfayvkase
       61 gidmtskffs sqytgsrnvs mvrgayhfal psvssgaaqa dffvnngggw spdgwtlppl
      121 ldveynpyav lgnscfsmsa sqmvswiraf sdrvlartgr vpmiystsdw wttctgnssa
      181 faanglhiaa yntrgpeplp agwpdykiwq ftdrgpfagd snvwkgslaq lksfaiqsdr
      241 astsaittdv gdingdgrnd avsiqtdgal mfragsgngk fasgvaigtg wnvytkiigs
      301 rdvngdgrnd llgvrsdgsm wfyagtgvvg sgtsgyapgr vvgtnnwnqy ssivavgdvn
      361 sdkkndliat rpdgtlwlip glgtinsags afgtpsrigs sgwdsfttis gvgdlnsdgv
      421 pdvvasrpdg tlwfyagtge kapsvnvfaa aekigtsgwn qfrdvlgagd ldgdgkpdiv
      481 girpdgvmyf yagtgmrdng yaagqqkggs gwsafkqvla agdldsdgvp dllaitydgs
      541 lwqypgnhvg gykariavgn swntyvtvig agdlngdskp dllairpdgt lwfyagsgri
      601 sanssgyapa lkigtywnsf kdvvavgdmn adgradlmaa radgslwfya gigsvssvnn
      661 gfaaaknlgv qdwvaaskfi gskdfnsdgr ndllsvdgag alwfragtgt ftsgtglrtp
      721 arigssgwna ygtvlgvgdt nldgkndlvg insngslwfy pgtgmkispf ragvnqgalr
//
LOCUS       WP_258068605             442 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 N-terminal domain-containing protein
            [Arthrobacter sp. N199823].
ACCESSION   WP_258068605
VERSION     WP_258068605.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. N199823
  ORGANISM  Arthrobacter sp. N199823
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 442)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00933.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Arthrobacter sp. N199823"
                     /db_xref="taxon:2058895"
     Protein         1..442
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=45342
     Region          28..>114
                     /region_name="kgd"
                     /note="multifunctional oxoglutarate
                     decarboxylase/oxoglutarate dehydrogenase thiamine
                     pyrophosphate-binding subunit/dihydrolipoyllysine-residue
                     succinyltransferase subunit; cl39092"
                     /db_xref="CDD:476867"
     Region          104..>442
                     /region_name="BglX"
                     /note="Periplasmic beta-glucosidase and related
                     glycosidases [Carbohydrate transport and metabolism];
                     COG1472"
                     /db_xref="CDD:441081"
ORIGIN      
        1 maawsgkrwv ligvcgvval lvivivlqff rdnaplvgqs stapastgpq asgqqsaspa
       61 sstpaatvps pspstasapp qsvspapass aperskaakk laamtvaqrv gqvlmvsspv
      121 tgadsnslya letlqvgnvf mkgrsmvgea gigaevasvv ahisdsrsdg vrpfvatdqe
      181 ggfvqimrgp gfddmpqaie qgqlspaalr adatrwgkql aavgvnvnla pvldtvpsae
      241 faplnapigs fgreygytpa fvsshglafa qgmmaagvep tvkhfpglgr vtlntdvaag
      301 vtdettvrkd pyiapfrdav nagvpwlmms nawypkidpn amapfstaiv edmvrgdlgf
      361 tgiivsddic davqvsevpv gqrgvdflva ggtmalctns allpqmysgm vqaaqsdpaf
      421 aatidkaall vleakdakgl id
//
LOCUS       WP_258068731             229 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Rathayibacter sp. AY1C1].
ACCESSION   WP_258068731
VERSION     WP_258068731.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1C1
  ORGANISM  Rathayibacter sp. AY1C1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Rathayibacter sp. AY1C1"
                     /db_xref="taxon:2080534"
     Protein         1..229
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=24613
     Region          <1..226
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mttvhgfsgp eilpayreal rhprtehlvs isdsdrspel dyaatvhhgi dvdgfpagsg
       61 gedlvilgri hpdkgtaeai riaavarrrl licgivqder ywreeveplv dgtrvvyrgs
      121 vgpeeralvl ggalallhpi gfdepfglsv veamacgtpv iayrrgsmae videsvtgya
      181 vgslseavaa vervglldra avretarrrf avdrmvdeyl avyagvlgr
//
LOCUS       WP_258068809             173 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: tetratricopeptide repeat protein [unclassified
            Rathayibacter].
ACCESSION   WP_258068809
VERSION     WP_258068809.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12688.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..173
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=18288
     Region          52..168
                     /region_name="TPR_5"
                     /note="Tetratrico peptide repeat; pfam12688"
                     /db_xref="CDD:403783"
ORIGIN      
        1 mtetrasdsd rpetdalalw laaverldaq ddpdgvverm rvlaarypgh dgvaafelgg
       61 aldsagheae aaveyerala agldderrar ltiqyastlr nlgrtdeaid llagaaahpa
      121 vgsarevfla lalhsagrvd ealrialeal apglpryqrs vrayaaaltd seq
//
LOCUS       WP_258068835             232 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Rathayibacter sp. AY1D2].
ACCESSION   WP_258068835
VERSION     WP_258068835.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D2
  ORGANISM  Rathayibacter sp. AY1D2
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Rathayibacter sp. AY1D2"
                     /db_xref="taxon:2080543"
     Protein         1..232
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=24729
     Region          <3..229
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mflvtmvhgf sgpeilpayr ealrhprtah lvsisdsdrs peldyaatvh hgidvdgfpa
       61 gsggedlvil grihpdkgta eavriaaaag rrlllcgivq derywreeve plvdgtrvvy
      121 rgsvgpeera lvlggalall hpigfdepfg lsvveamacg tpviayrrgs maeiidegvt
      181 gyavgslsea vaavervgll draavratar rrfavdrmvd eylavyagvl gr
//
LOCUS       WP_258068839             232 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Rathayibacter sp. AY1D2].
ACCESSION   WP_258068839
VERSION     WP_258068839.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D2
  ORGANISM  Rathayibacter sp. AY1D2
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Rathayibacter sp. AY1D2"
                     /db_xref="taxon:2080543"
     Protein         1..232
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=24711
     Region          <3..229
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mflvtmvhgf sgpeilpayr ealrhprtah lvsisdsdrs peldyaatvh hgidvdgfpa
       61 gsggedlvil grihpdkgta eavriaaaag rrlllcgivq derywreeve plvdgtrvvy
      121 rgsvgpeera lvlggalall hpigfdepfg lsvveplacg tpvlahrrgs maeiidegvt
      181 gyavgslsea vaavervgll draavratar rrfavdrmvd eylavyagvl gr
//
LOCUS       WP_258068901             367 aa            linear   BCT 02-MAR-2025
DEFINITION  alanine racemase [Rathayibacter sp. AY1D2].
ACCESSION   WP_258068901
VERSION     WP_258068901.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D2
  ORGANISM  Rathayibacter sp. AY1D2
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 367)
  AUTHORS   Shaw,J.P., Petsko,G.A. and Ringe,D.
  TITLE     Determination of the structure of alanine racemase from Bacillus
            stearothermophilus at 1.9-A resolution
  JOURNAL   Biochemistry 36 (6), 1329-1342 (1997)
   PUBMED   9063881
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013345.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01168.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Rathayibacter sp. AY1D2"
                     /db_xref="taxon:2080543"
     Protein         1..367
                     /product="alanine racemase"
                     /EC_number="5.1.1.1"
                     /calculated_mol_wt=37388
     Region          20..364
                     /region_name="PLPDE_III"
                     /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
                     Enzymes; cl00261"
                     /db_xref="CDD:469695"
     Site            order(53,55,96,146,179,181,239..242)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate (PLP) binding site [chemical
                     binding]"
                     /db_xref="CDD:143494"
     Site            55
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:143494"
ORIGIN      
        1 mtvdtaaads sarsavldal atpalvldea vldrdiaava aasrerglal rphakthksl
       61 eiarrqlaag avgltvatvs eaevfaaggi rdlfiayplw ldaeragrlr hvlasarvrv
      121 gvdsaesaer laaalpereg levvveidsg hhrsgvlpae agaiaaaavs agldvagvft
      181 fpghsyaagn gaaaardear alaesvasla asgvearvvs ggstpsaafa dssvltelrp
      241 gvsalgdaqq weigtmtped iavtvlativ srrgdhliad agskvlssdr gaassgfgrl
      301 pehpearipv lsehhatitg vdlpvgtrvr iapnhvcvav nladeyrvll rdgggavwpi
      361 dargrns
//
LOCUS       WP_258068911             141 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2975 domain-containing protein [Arthrobacter sp. N199823].
ACCESSION   WP_258068911
VERSION     WP_258068911.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. N199823
  ORGANISM  Arthrobacter sp. N199823
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022636.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11188.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Arthrobacter sp. N199823"
                     /db_xref="taxon:2058895"
     Protein         1..141
                     /product="DUF2975 domain-containing protein"
                     /calculated_mol_wt=15051
ORIGIN      
        1 mflgllvfsv vvqvwflpse vrtvvavfpe vqplavpsvv wgvlaiacwq iagiialdlm
       61 whadrhhfda sthgrlrtmi gclflfialv vaalialnir gystpgvmfg ligtgllavi
      121 gatslaiflg srplagrysh v
//
LOCUS       WP_258068914             318 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF998 domain-containing protein [Rathayibacter sp. AY1D2].
ACCESSION   WP_258068914
VERSION     WP_258068914.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D2
  ORGANISM  Rathayibacter sp. AY1D2
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017959.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06197.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Rathayibacter sp. AY1D2"
                     /db_xref="taxon:2080543"
     Protein         1..318
                     /product="DUF998 domain-containing protein"
                     /calculated_mol_wt=32934
     Region          3..212
                     /region_name="DUF998"
                     /note="Protein of unknown function (DUF998); cl21592"
                     /db_xref="CDD:473918"
     Region          <207..311
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mgtrgagvlw vvsalayvga eavaasafpg ysyarnyisd lgvpevgvfq graidsplha
       61 vmnagfllqg alylaaavtt vraarggsrg lflslavvya vgiavvglmh gssasaqngi
      121 gglhvvgaam aivggnaasi vagaaarrgr apwalgtvgi vlgavgllal lmlqvdtrvp
      181 gvdllpdgvw erasvyavta wqlatglrll rrpdaprrpl ppqtagsgaq vrsavhrlfq
      241 lgiripeals vvvfddnpws elvtpplsvv rqpidmlarh rvelvlarmq grlpeapqhi
      301 evqadlvirs scaapprr
//
LOCUS       WP_258068935             300 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY-family carbohydrate kinase, partial [Rathayibacter sp. AY1D2].
ACCESSION   WP_258068935
VERSION     WP_258068935.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D2
  ORGANISM  Rathayibacter sp. AY1D2
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 300)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 300)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02782.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Rathayibacter sp. AY1D2"
                     /db_xref="taxon:2080543"
     Protein         <1..300
                     /product="FGGY-family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <11..236
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 sdgvgrhhag agapacppeg dagtgmvatn svaprtgnvs agtsifamvv legplesvhh
       61 eldlvatpag dlvamvhcnn gaselagwvg lfsrfaaasg gpsdsdavyg tlfaealege
      121 adaggllayn hlagepiagl vegrplvvrt pdsrltlanf mraqlygvfg tlalgmrvla
      181 gegvridemf ahggmfrtag vaqrflagal dapvsvaata seggpwgmav laayrlqsgv
      241 aldayltdqv fgdsgfetva pdaddvagfs ayleryragl aveqtavetl tdpqnqgata
//
LOCUS       WP_258068903             900 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Rathayibacter sp. AY1D2].
ACCESSION   WP_258068903
VERSION     WP_258068903.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D2
  ORGANISM  Rathayibacter sp. AY1D2
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 900)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Rathayibacter sp. AY1D2"
                     /db_xref="taxon:2080543"
     Protein         1..900
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=92853
     Region          66..324
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     Region          351..894
                     /region_name="PRK09274"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:236443"
ORIGIN      
        1 msaphpaeri rgalgstaaa qlppagldgl dpawsrlvda pdaqgvprrw hlldtgealg
       61 tepvgtvlcv hgnptwsylw rrlaaatles arrggpawrv vavdqlemgf sertgalhtl
      121 adrvrelanl tdvlglddvv tlghdwggvv slgwavdhpe qlratmllnt aihqsadepi
      181 paplrlalas gvlgastvgt paflettlal ghpalpsavk egyrapyrsa srrggvggfv
      241 adipvdsahp sdpelqriae gvsalttpal mlwgpldpif sdrylddlvd rlphaqvhry
      301 egaghlvaed vdyssavltw lgdlsdgeep fggdpapdvr rptapveplw ahldrnaqdd
      361 slalvemapp ggggprsvsw rllsqrvrel aaglrasgvs pgdrvsllvp pgadltally
      421 aclrigavvv vadaglglrg ltravrgawp dlvvgalpgl tvaralrwpg grvstqtlpr
      481 asasalgvdt slgqlielgr aelaadpeal geapaadava ailftsgstg pakgvvythr
      541 qlagvrdala rqygigpgtg lvagfapfal lgpalgtrsa tpdmdvtapr tltaaavaaa
      601 aarvdatvlf lspaalanvv atagaldadd hralagvrtf lsagapvsag llgeaqalmp
      661 nasartpygm tegllltdas legireaaad ddprggvcvg vpaagvrlri apldadgraa
      721 depeeitgtt geivvsaghv edhyerlwlt draarvgavp gerwhrtgdv gridsagrlw
      781 vegrmphvvv tpdgvvtpvg peqriearva svaraaivga gprgvaqlva vvelrsgarr
      841 vvlaeealaa evraavarpv aavlvvpalp tdirhnskid raalsrwaeg vlaggpmvap
//
LOCUS       WP_258068954             900 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Rathayibacter sp. AY1F8].
ACCESSION   WP_258068954
VERSION     WP_258068954.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1F8
  ORGANISM  Rathayibacter sp. AY1F8
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 900)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Rathayibacter sp. AY1F8"
                     /db_xref="taxon:2080562"
     Protein         1..900
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=92961
     Region          66..324
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     Region          351..894
                     /region_name="PRK09274"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:236443"
ORIGIN      
        1 mtaphpaeri rgalgstaaa qlppagldgl dpawsrlvda pdaqgvprrw hlldtgealg
       61 tepvgtvlcv hgnptwsylw rrlaaatles arsggpawrv vavdqlemgf sertgalhtl
      121 adrvrelsnl tdvlglddvv tlghdwggvv slgwavdhpe qlratmllnt aihqsadepi
      181 paplrlalas gvlgastvgt paflettlal ghpalpsavk egyrapyrsa srrggvggfv
      241 adipvdsahp sdpelqriae gvsalttpal mlwgpldpif sdrylddlvd rlphaqvhry
      301 egaghlvaed vdyssavltw lgdlsdgeep fggdpapdvr rptapveplw ahldrnaqdd
      361 slalvemapp ggggprsvsw rllsqrvrel aaglrasgvs pgdrvsllvp pgadltally
      421 aclrigavvv vadaglglrg ltravrgawp dlvvgalpgl tvaralrwpg grvstqtlpr
      481 asasalgvdt slgqlielgr aelaadpeal geapaadava ailftsgstg pakgvvythr
      541 qlagvrdala rqygigpgtg lvagfapfal lgpalgtrsa tpdmdvtapr tltaaavaaa
      601 aarvdatvlf lspaalanvv atagaldtdd hralagvrtf lsagapvsag llgeaqalmp
      661 nasartpygm tegllltdas legireaasd ddprggvcvg vpaagvrlri apldadgraa
      721 depeeitgtt geivvsaghv edhyerlwlt draarvgavp gerwhrtgdv gridsagrlw
      781 vegrvphvvv tpdgvvtpvg peqriearva svaraaivga gprgvaqlvt vvelrsgarr
      841 vvlaeealaa evraavdrpv aavlvvpalp tdirhnskid raalsrwaeg vlaggrmvap
//
LOCUS       WP_258069046             229 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Rathayibacter sp. AY1F8].
ACCESSION   WP_258069046
VERSION     WP_258069046.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1F8
  ORGANISM  Rathayibacter sp. AY1F8
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Rathayibacter sp. AY1F8"
                     /db_xref="taxon:2080562"
     Protein         1..229
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=24294
     Region          <1..226
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mttvhgfsgp eilpayreal rhtrtahlvs isdsdrspel dyaatvhhgi dvegfpagsg
       61 gedlvilgri hpdkgtaeav riaaaagrrl licgivqder ywreeveplv dgtrvvyrgs
      121 vgpeeralvl ggalavlhpi gfdkpfglsv veamacgtpv ianrrgsmae iidegvtgya
      181 vgslseavaa vervglldra avratarrrf avdrmvdeyl avyagvlgr
//
LOCUS       WP_258069050             488 aa            linear   BCT 02-MAR-2025
DEFINITION  Mu transposase C-terminal domain-containing protein [Arthrobacter
            sp. N199823].
ACCESSION   WP_258069050
VERSION     WP_258069050.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. N199823
  ORGANISM  Arthrobacter sp. N199823
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 488)
  AUTHORS   Rice,P. and Mizuuchi,K.
  TITLE     Structure of the bacteriophage Mu transposase core: a common
            structural motif for DNA transposition and retroviral integration
  JOURNAL   Cell 82 (2), 209-220 (1995)
   PUBMED   7628012
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020859.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09299.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Arthrobacter sp. N199823"
                     /db_xref="taxon:2058895"
     Protein         1..488
                     /product="Mu transposase C-terminal domain-containing
                     protein"
                     /calculated_mol_wt=54933
     Region          40..334
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
     Region          357..414
                     /region_name="Mu-transpos_C"
                     /note="Mu transposase, C-terminal; pfam09299"
                     /db_xref="CDD:430512"
ORIGIN      
        1 mnagagsksq yqflepdnia varwmvlreh vengsplttl asehgislrt lqrwhhaykl
       61 ygnaglepap rpkrgrkspp eliiliegla lvkprkttea ihqqankvat rqgwptvsys
      121 tvrsitatld pgmltlahqg pvayrdqyel vwrsraerpn avwqadhtql dllildsdgk
      181 tirpwlttil ddhsraicgy mvftgapssm ntalalrqai wpktdstwpm cgipdvlyvd
      241 hgtdftshhl aqtakdlhfe ivfsavarpq grgkierlfg tintellsgl pgyltqgarn
      301 prpqltvael ngtiadflth aynqrehqei rqtpqhawsg ngwlprlpat ieelnllllt
      361 vaksrivhrd gvhfqglryi spllaayvge hvivrydpad iaeirifhrg aylckavdpt
      421 herstvslke iqearaarkr elrgqineri atvahhlpak nrdfttepeq nrrppvkhrl
      481 dtyqedrs
//
LOCUS       WP_258069199             222 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Rathayibacter sp. AY1H3].
ACCESSION   WP_258069199
VERSION     WP_258069199.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1H3
  ORGANISM  Rathayibacter sp. AY1H3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Rathayibacter sp. AY1H3"
                     /db_xref="taxon:2080567"
     Protein         1..222
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=24570
     Region          79..216
                     /region_name="NUDIX_ADPRase_Ndx2"
                     /note="NUDIX family Ndx2; cd24161"
                     /db_xref="CDD:467609"
ORIGIN      
        1 mrdssresgp lprggpdsra dedpagerpe veeplraapa dvavrqlstr vayetpwirv
       61 redevlwpgg trgvysvver ddyalvlpre rggfwlveqy rypigrrawe fpaggwphgs
      121 aggdpealar aelreetglr aerlthlgrl aeaygfvaqs vdvflaegle hgeheredte
      181 qdmrqqwfpd aeiaemvrsg aivetaavaa lalfhlergs lg
//
LOCUS       WP_258069197             985 aa            linear   BCT 02-MAR-2025
DEFINITION  immunoglobulin-like domain-containing protein [Rathayibacter sp.
            AY1H3].
ACCESSION   WP_258069197
VERSION     WP_258069197.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1H3
  ORGANISM  Rathayibacter sp. AY1H3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042837.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20578.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Rathayibacter sp. AY1H3"
                     /db_xref="taxon:2080567"
     Protein         1..985
                     /product="immunoglobulin-like domain-containing protein"
                     /calculated_mol_wt=101270
     Region          <186..252
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          279..348
                     /region_name="aBig_2"
                     /note="Atrophied bacterial Ig domain; pfam20578"
                     /db_xref="CDD:466727"
     Region          361..451
                     /region_name="aBig_2"
                     /note="Atrophied bacterial Ig domain; pfam20578"
                     /db_xref="CDD:466727"
     Region          488..803
                     /region_name="GH43_Bt3655-like"
                     /note="Glycosyl hydrolase family 43 protein such as
                     Bacteroides thetaiotaomicron VPI-5482 arabinofuranosidase
                     Bt3655; cd08983"
                     /db_xref="CDD:350097"
ORIGIN      
        1 mrslflsala ctsvaltgal vpvsaqavdv paptahydms hagsalldis gngrnatltg
       61 ltdasfanas gdqvarfknd gyaslpqglv tgadnafave ytvktqttan qfgwvigdgv
      121 gpwnttqlgn hvfvnprnpd gspsgqvlag irvkeptnng etrmpfggtl npgfttltlv
      181 gtgtgsstvl tlyrdgtqis tanttksmas ivptgstlgy lgrslysgda lvtadvtdvk
      241 fwdtsltaeq vassmptata kasatsallr sdiqpvllag npsltqvssn ltlpasssgv
      301 pltwtssnsa vvsatgvvsr siaqntpvtl tattaqgati afevvvlaps inddldalkl
      361 atrttenlpl avkgarngtd itwtssdpal vtptntsyaa pavgaadpyr gggvvtrpay
      421 gsgdrtvtlt atatlngvae traftltvae lgrtapdagy asayfksdgd ekiyqaatsg
      481 ndfftfspvn ggkavitstt dtkglrdpfi lrshngdkyy mvatdlcisc gtgwgdaqsk
      541 gslkievwes tdlvqwtrtn gadtgitvnq paagmtwape aywddalqsy vvffssrlys
      601 datktnndkl ysrvfsvitr dfrtftappa twqdtgyari dstitkigdy yyrftkneeg
      661 gaagtleagk diflekskvl tagttssnws adpnttwqlt dtrmtsletg qagegpeiik
      721 lnagdpndtt gagdgyaflv dnygdggyka fitsgaaiag ssqtnrlsqs adwnvspksr
      781 aglpasprhg afvsvpqtvl tamknwtgvt avdstttlta dgrtvtatva aadkgdvvgs
      841 vtftggswts tvplsggsas vsvpagvtav tasytgyadk lvrtsvsaav pldtlelvpa
      901 vatrcvagki vltatvkntd taaadvtits aygsksftav apgssasaaf ttrlasmpag
      961 tvtvtgsatg qpaftatvpv aaarc
//
LOCUS       WP_258069200             299 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4097 family beta strand repeat-containing protein [Rathayibacter
            sp. AY1H3].
ACCESSION   WP_258069200
VERSION     WP_258069200.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1H3
  ORGANISM  Rathayibacter sp. AY1H3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024743.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13349.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Rathayibacter sp. AY1H3"
                     /db_xref="taxon:2080567"
     Protein         1..299
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /calculated_mol_wt=31242
     Region          <101..261
                     /region_name="YvlB"
                     /note="Uncharacterized conserved protein YvlB, contains
                     DUF4097 and DUF4098 domains [Function unknown]; COG3595"
                     /db_xref="CDD:442814"
ORIGIN      
        1 mslekwlvqa getkvidldv vrsvkvalvg gqidviahde ptarvevhrv dgrplkvsmd
       61 gdrleidhvq lrwdtivdvv kglgrrgdra disllvprgv dlkfdtvsad glvsglhsda
      121 rvstvggdiv vdglhgdiev ntvhgelsvr shtgrvtart vsgdvtatge ltrftvdgvs
      181 gsvfvdaegt pdriqantvs gdltirvdeg lgaryrintv sgtlqldgsv vkgtfgrgft
      241 sttgsldskw vdvaansvsg dvvvvrrsva assasvgegw gspgtgpadd rrpmdgssl
//
LOCUS       WP_258069219             367 aa            linear   BCT 02-MAR-2025
DEFINITION  alanine racemase [Rathayibacter sp. AY1H3].
ACCESSION   WP_258069219
VERSION     WP_258069219.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1H3
  ORGANISM  Rathayibacter sp. AY1H3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 367)
  AUTHORS   Shaw,J.P., Petsko,G.A. and Ringe,D.
  TITLE     Determination of the structure of alanine racemase from Bacillus
            stearothermophilus at 1.9-A resolution
  JOURNAL   Biochemistry 36 (6), 1329-1342 (1997)
   PUBMED   9063881
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013345.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01168.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Rathayibacter sp. AY1H3"
                     /db_xref="taxon:2080567"
     Protein         1..367
                     /product="alanine racemase"
                     /EC_number="5.1.1.1"
                     /calculated_mol_wt=37416
     Region          20..364
                     /region_name="PLPDE_III"
                     /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
                     Enzymes; cl00261"
                     /db_xref="CDD:469695"
     Site            order(53,55,96,146,179,181,239..242)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate (PLP) binding site [chemical
                     binding]"
                     /db_xref="CDD:143494"
     Site            55
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:143494"
ORIGIN      
        1 mtvdtaaads sarsavldal atpalvldea vldrdiaava aasrerglal rphakthksl
       61 eiarrqlaag avgltvatvs eaevfaaggi rdlfiayplw vdaeragrlr hvlasarvrv
      121 gvdsaesaer laaalpereg levvveidsg hhrsgvlpae agaiaeaavs agldvagvft
      181 fpghsyaagn gaaaardear alaeavasla asgvearvis ggstpsaafa dssvltelrp
      241 gvsalgdaqq weigtmtped iavtvlativ srrgdhliad agskvlssdr gaassgfgrl
      301 pehpearipv lsehhatitg vdlpvgtrvr iapnhvcvav nladeyrvll rdgggavwpv
      361 dargrns
//
LOCUS       WP_258069225             963 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Rathayibacter sp. AY1H3].
ACCESSION   WP_258069225
VERSION     WP_258069225.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1H3
  ORGANISM  Rathayibacter sp. AY1H3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 963)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Rathayibacter sp. AY1H3"
                     /db_xref="taxon:2080567"
     Protein         1..963
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=101304
     Region          46..340
                     /region_name="GH43_FsAxh1-like"
                     /note="Glycosyl hydrolase family 43 such as Fibrobacter
                     succinogenes subsp. succinogenes S85 arabinoxylan
                     alpha-L-arabinofuranosidase; cd09001"
                     /db_xref="CDD:350115"
     Site            order(58,83,130..131,176..177,235,294..295,315,317,323)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:350115"
     Region          407..533
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; pfam02018"
                     /db_xref="CDD:396553"
     Region          571..787
                     /region_name="GH43_C2"
                     /note="Beta xylosidase C-terminal Concanavalin A-like
                     domain; pfam17851"
                     /db_xref="CDD:436093"
ORIGIN      
        1 mravastaig allaagllas gaapataaga wspkasytst drgdgtysvp llnadvpdvs
       61 vervpaaend egrdiyymis ttmhlspgap imksydlvnw eivnyvfdrl eigdrfslrn
      121 gqnsygngqw asslryhdgr yyavfntnnl ggsylystdd iedgawtrta lgrafhdpsl
      181 ffddadggtp yifygsgsts avklsedltt vvaeypnilr tsdypgagyl gglfegaqvq
      241 yidgqyyivi itwpsgqgrq valfrssall gryatadgsn pyegkgvlns sgfaqgslvp
      301 iakedgstaw hgmffrdsfp tgripglipa twkdgwptfg tngsvpvggs fpkpirlspe
      361 eelferqksi vvsddfdnda pakayqdesw tippapayda sllgvqllqn pgaesgtapw
      421 agqfgatlsa dttdpasgta alrvgtrtln gsgpsqvlas klqrgvtytv sakvkyttgp
      481 asvrfnlcad fgagpvtmas aavtqgqwtt itgtytvpet anvgsvkfav etpwgnpqpa
      541 sssteylldd vslvgaaptl erptaaeiep ngstlalpwq wnhapdnryw slteregwlr
      601 ltngkvlsgt aahtrlsgsp emtyleearn tlsqrivapk qsaeaafdvs gmkdgdvagl
      661 aaynrgfsyv avkrvdgvtt vgvvnrsqpf attfdqaave sflpgttaal gdasqvrlka
      721 dlelsapagq lwttfsysld gtswtklgsr vgpqtldgql thfmghrlgl fsyatktagg
      781 hvdvdeflls dtlssegkal drsqldaava haatlrsddy padawsdlqs vlakaqavgt
      841 agsqnqidap eralsyqlar lgtlkeasld vtaaaatrci agkvvvtvra tnaddvpval
      901 rmesasgakt vaalapgatt shafttraas vpgaevvvta tatldgepvt ttvraphpaa
      961 scg
//
LOCUS       WP_258069236             111 aa            linear   BCT 02-MAR-2025
DEFINITION  acetolactate decarboxylase [Rathayibacter sp. AY1H3].
ACCESSION   WP_258069236
VERSION     WP_258069236.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1H3
  ORGANISM  Rathayibacter sp. AY1H3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 111)
  AUTHORS   Monnet,C., Aymes,F. and Corrieu,G.
  TITLE     Diacetyl and alpha-acetolactate overproduction by Lactococcus
            lactis subsp. lactis biovar diacetylactis mutants that are
            deficient in alpha-acetolactate decarboxylase and have a low
            lactate dehydrogenase activity
  JOURNAL   Appl Environ Microbiol 66 (12), 5518-5520 (2000)
   PUBMED   11097941
REFERENCE   2  (residues 1 to 111)
  AUTHORS   Goupil-Feuillerat,N., Corthier,G., Godon,J.J., Ehrlich,S.D. and
            Renault,P.
  TITLE     Transcriptional and translational regulation of alpha-acetolactate
            decarboxylase of Lactococcus lactis subsp. lactis
  JOURNAL   J Bacteriol 182 (19), 5399-5408 (2000)
   PUBMED   10986242
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015277.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03306.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Rathayibacter sp. AY1H3"
                     /db_xref="taxon:2080567"
     Protein         1..111
                     /product="acetolactate decarboxylase"
                     /EC_number="4.1.1.5"
                     /GO_function="GO:0047605 - acetolactate decarboxylase
                     activity [Evidence IEA]"
                     /GO_process="GO:0045151 - acetoin biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=11470
     Region          <2..106
                     /region_name="AldB-like"
                     /note="proteins similar to alpha-acetolactate
                     dehydrogenase; cl38904"
                     /db_xref="CDD:365780"
ORIGIN      
        1 maqaepyrrl adamrdqhev rltgvegtll gfvgpqpfqg isvaglhthv vdttggiggh
       61 vlaasgvagl leieqyggit llllesddhp radldavada giravetdhp p
//
LOCUS       WP_258069258             900 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Rathayibacter sp. AY1H3].
ACCESSION   WP_258069258
VERSION     WP_258069258.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1H3
  ORGANISM  Rathayibacter sp. AY1H3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 900)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Rathayibacter sp. AY1H3"
                     /db_xref="taxon:2080567"
     Protein         1..900
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=92866
     Region          66..324
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     Region          351..894
                     /region_name="PRK09274"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:236443"
ORIGIN      
        1 msaphpaeri rgalgstaaa qlppagldgl dpawsrlvda pdaqgvprrw hlldtggalg
       61 tepvgtvlcv hgnptwsylw rrlaaatles arrggpawrv vavdqlemgf sertgalhtl
      121 adrvrelsnl tdvlglddvv tlghdwggvv slgwavdhpe qlratmllnt aihqsadepi
      181 paplrlalas gvlgastvgt paflettlal ghpalpsavk egyrapyrsa srrggvggfv
      241 adipvdsahp sdpelqriae gvsalttpal mlwgpldpif sdrylddlve rlphaqvhry
      301 egaghlvaed vdyasavltw lgdlsdgeep fggdpapdvr rptapveplw ahldrnaqdd
      361 slalvemapp ggggprsvsw rllsqrvrel aaglrasgvs pgdrvsllvp pgadltally
      421 aclrigavvv vadaglglrg ltravrgawp dlvvgalpgl avaralrwpg grvstqtlpr
      481 asasalgvdt slgqlielgr aelaadpeal geapaadava ailftsgstg pakgvvythr
      541 qlagvrdala rqygigpgtg lvagfapfal lgpalgtrsa tpdmdvtapr tltaaavaaa
      601 aarvdatvlf lspaalanvv atagaldadd hralagvrtf lsagapvsag llgeaqalmp
      661 nasartpygm tegllltdas legireaasd ddprggvcvg vpaagvrlri apldadgrat
      721 depeeitgtt geivvsaghv edhyerlwlt draarvgavp gerwhrtgdv gridsagrlw
      781 vegrmphvvv tpdgvvtpvg peqriearva pvaraaivga gprgvaqlva vvelrsgarr
      841 vvlaeealaa evraavgrpv aavlvvpalp tdirhnskid raalsrwaeg vlaggrmvap
//
LOCUS       WP_258069259             288 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Rathayibacter sp. AY1H3].
ACCESSION   WP_258069259
VERSION     WP_258069259.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1H3
  ORGANISM  Rathayibacter sp. AY1H3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Rathayibacter sp. AY1H3"
                     /db_xref="taxon:2080567"
     Protein         1..288
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=30065
     Region          5..287
                     /region_name="PRK12748"
                     /note="3-ketoacyl-(acyl-carrier-protein) reductase;
                     Provisional"
                     /db_xref="CDD:237189"
ORIGIN      
        1 msallplqgr talvtgvsrr rgigfavaak laslgahlvv hhhrphdldl pwggddldav
       61 rselrahlte garfadvaad ladpstipgl iataadltgs ldvlvcnhak sgddgsildm
      121 tperltafwd vntrstlllt aefarlrapr tdgprrpgdr ivgagpyara qghvfwmtsg
      181 qihgamrgev ayaaskaala gvtatvaael lelgivlnti dpgpvntgyl dpettdrsle
      241 dleeyvattp fgrvgapadp aeliawlats agswvvgqvl ttdggfsl
//
LOCUS       WP_258069277             255 aa            linear   BCT 02-MAR-2025
DEFINITION  Ltp family lipoprotein [Rathayibacter sp. AY1H3].
ACCESSION   WP_258069277
VERSION     WP_258069277.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1H3
  ORGANISM  Rathayibacter sp. AY1H3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 255)
  AUTHORS   Bebeacua,C., Lorenzo Fajardo,J.C., Blangy,S., Spinelli,S.,
            Bollmann,S., Neve,H., Cambillau,C. and Heller,K.J.
  TITLE     X-ray structure of a superinfection exclusion lipoprotein from
            phage TP-J34 and identification of the tape measure protein as its
            target
  JOURNAL   Mol Microbiol 89 (1), 152-165 (2013)
   PUBMED   23692331
REFERENCE   2  (residues 1 to 255)
  AUTHORS   Neve,H., Zenz,K.I., Desiere,F., Koch,A., Heller,K.J. and Brussow,H.
  TITLE     Comparison of the lysogeny modules from the temperate Streptococcus
            thermophilus bacteriophages TP-J34 and Sfi21: implications for the
            modular theory of phage evolution
  JOURNAL   Virology 241 (1), 61-72 (1998)
   PUBMED   9454717
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019191.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07553.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Rathayibacter sp. AY1H3"
                     /db_xref="taxon:2080567"
     Protein         1..255
                     /product="Ltp family lipoprotein"
                     /calculated_mol_wt=25782
     Region          7..81
                     /region_name="YqfX"
                     /note="Uncharacterized sporulation protein YqfX, contains
                     DUF308 domain [Cell cycle control, cell division,
                     chromosome partitioning]; COG5921"
                     /db_xref="CDD:444622"
     Region          89..>161
                     /region_name="kgd"
                     /note="multifunctional oxoglutarate
                     decarboxylase/oxoglutarate dehydrogenase thiamine
                     pyrophosphate-binding subunit/dihydrolipoyllysine-residue
                     succinyltransferase subunit; cl39092"
                     /db_xref="CDD:476867"
     Region          157..203
                     /region_name="Lipoprotein_Ltp"
                     /note="Host cell surface-exposed lipoprotein; pfam07553"
                     /db_xref="CDD:462206"
     Region          206..253
                     /region_name="Lipoprotein_Ltp"
                     /note="Host cell surface-exposed lipoprotein; pfam07553"
                     /db_xref="CDD:462206"
ORIGIN      
        1 mtaaiptsap ktgptglaia alvvgivafl vglvpvfgal vgiaavilgi lalrrgqska
       61 msitgvvlgg lavlaslltt igfgaavnsa ssdrpaaviv essepttapv vpateeaevv
      121 etaepapvet aepapvetva papapvetaa aaqvspefas alikaqsyse mlhmskagly
      181 gqltseygeq fspeaaqyav dtvsadwnan alakakdyqa qmamapeair dqltseygeq
      241 ftsdeadyai ahlnd
//
LOCUS       WP_258069328             900 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Rathayibacter sp. AY2B9].
ACCESSION   WP_258069328
VERSION     WP_258069328.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY2B9
  ORGANISM  Rathayibacter sp. AY2B9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 900)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Rathayibacter sp. AY2B9"
                     /db_xref="taxon:2080572"
     Protein         1..900
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=92722
     Region          66..324
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     Region          351..894
                     /region_name="PRK09274"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:236443"
ORIGIN      
        1 msaphpaeri rgalgstaaa qlppagldgl dpawsrlvda pdaqgvprrw hlldtggalg
       61 tepvgtvlcv hgnptwsylw rrlaaatles arhggpawrv vavdqlemgf sertgalhtl
      121 adrvrelsnl tdvlglddvv tlghdwggvv slgwavdhpe qlratmllnt aihqsadepi
      181 paplrlalas gvlgastvgt paflettlal ghpalpsavk egyrapyrsa srrggvggfv
      241 adipvdsahp sdpelqriae gvsalttpal mlwgpldpif sdrylddlvd rlphaqvhry
      301 egaghlvaed vdyasavltw lgdlsdgeep fggdpapdvr rptapveplw ahldrnaqdd
      361 slalvemapp ggggprsvsw rllsqrvrel aaglrasgvs pgdrvsllvp pgadltally
      421 aclrigavvv vadaglglrg ltravrgawp dlvvgalpgl tvaralrwpg grvstqtlpr
      481 asasalgvdt slgqlielgr aelaadpeal geapagdava ailftsgstg pakgvvythr
      541 qlagvrdala rqygigpgtg lvagfapfal lgpalgtrsa tpdmdvtapr tltaaavaaa
      601 aarvdatvlf lspaalanvv atagaldtdd hralagvrtf lsagapvsag llgeaqalmp
      661 nasartpygm tegllltdas legireaasd ddprggvcvg vpaagvrlri apldaggraa
      721 depeeitgtt geivvsaghv edhyerlwlt draarvgavp gerwhrtgdv gridsagrlw
      781 vegrmphvvv tpdgvvtpvg peqriearva svaraaivga gprgvaqlva vvelrsgarr
      841 vvlaeealaa evraavgrpv aavlvvpalp tdirhnskid raalsrwaeg vlaggpmvap
//
LOCUS       WP_258069431             110 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Pectobacterium
            brasiliense].
ACCESSION   WP_258069431
VERSION     WP_258069431.1
KEYWORDS    RefSeq.
SOURCE      Pectobacterium brasiliense
  ORGANISM  Pectobacterium brasiliense
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Pectobacterium.
REFERENCE   1  (residues 1 to 110)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Pectobacterium brasiliense"
                     /db_xref="taxon:180957"
     Protein         1..110
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=12250
     Region          <4..102
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mggirfwrpe kgdiyrwefv enketvrvep agtitvndge lmrslavrsv gliysstfht
       61 srelangtle aalldlspgn dglflyfsra arnqpklraf idvcsqiikt
//
LOCUS       WP_258069539             386 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [unclassified Rathayibacter].
ACCESSION   WP_258069539
VERSION     WP_258069539.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..386
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=37819
     Region          43..348
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(57,108..109,111..113,116,136,139..140,143,216,
                     219..220,223..225,228,257,261,310..311,315,319,335,
                     338..339,342..343,346)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mrnrlatpsl lvhavliqav afllrpaavy qairldvpaw algalgasfa lvpllialpv
       61 gglvdrvgar avmavgslva vgaaavllla ggsvaglllg iallgaghlg cvvgqqtvva
      121 ggtggtrlds rfgyytfaas lgqaigpafi pvlaggsvrp dpaplflvgg ilavlllvst
      181 agirspsprg paaegaaapg stlgllrvpg laralltsat vvaavdltvv ylpalgaerg
      241 lpagvvgall tvralasmas rlllgaatar lgrtrvmvgg ilisalclvl valpaptvll
      301 fvavaalglg lgigqpitms wliertpadr hgralalrla gnrlglialp sllgvlaaaa
      361 gaggvligtg aavgatllll rgvrld
//
LOCUS       WP_258069552             249 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MBL fold metallo-hydrolase [unclassified
            Rathayibacter].
ACCESSION   WP_258069552
VERSION     WP_258069552.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 249)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 249)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..249
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=26151
     Region          26..239
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(75,77,79..80,172..173,191,238)
                     /site_type="active"
                     /db_xref="CDD:293792"
     Site            order(75,77,79,172,191,238)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:293792"
ORIGIN      
        1 msgsarrsrv rmrttavapg vlfvegplsn wtvltghgsv elvdcgyprd lrlversial
       61 aggrmqdlrr ilithghsdh lgssrllart rgvavatgpv eaanvrreie eqvtlrellp
      121 vlhrprtidw vlravaaggl grvgvptave lagtelaltt ghtlrvvpsp ghtsghtayl
      181 epsagvliag dalvtghpll dsdglqllpg ffhadpdeaa aagrhlrelp ahwilpghga
      241 plkvgeaaa
//
LOCUS       WP_258069585             416 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF3027 domain-containing protein [unclassified
            Rathayibacter].
ACCESSION   WP_258069585
VERSION     WP_258069585.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022674.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11228.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..416
                     /product="DUF3027 domain-containing protein"
                     /calculated_mol_wt=42767
     Region          <30..233
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          241..>309
                     /region_name="DUF3027"
                     /note="Protein of unknown function (DUF3027); pfam11228"
                     /db_xref="CDD:431743"
ORIGIN      
        1 mpdadgttde qgpveetvaa ptpedarveq ssgegdsgep dttpaeedss aedasgadee
       61 iaadeaapvd eapsgegesd aalpvteapg edsasaeetp paddvaaeag apgadtasaa
      121 vptpaedaal addavpadda gtpegsapaq dmapaddltp aedaapaedg apaedatsae
      181 dsgpvaddrs eadddaspge adeaaadeap epvyeadavl agsldvaraa laeiapegti
      241 gelvttlaqg ehvvslqfan lmrgypgwlw tatlsriden edvnvlevel lpgegavlap
      301 dwvpwsvrla dyqtaqdalg eevedaddde ledaeeddld desdddsded edagddddsd
      361 ddddseddsd dddsddedsd eddsddpddd sddedsddve hepapapttr rrrrrr
//
LOCUS       WP_258069669             169 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6326 family protein [Arthrobacter sp. SX1312].
ACCESSION   WP_258069669
VERSION     WP_258069669.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. SX1312
  ORGANISM  Arthrobacter sp. SX1312
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039408.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19851.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Arthrobacter sp. SX1312"
                     /db_xref="taxon:2058896"
     Protein         1..169
                     /product="DUF6326 family protein"
                     /calculated_mol_wt=18678
     Region          23..133
                     /region_name="DUF6326"
                     /note="Family of unknown function (DUF6326); pfam19851"
                     /db_xref="CDD:437683"
ORIGIN      
        1 mmrtrqptit alenqripvq aklaaawtsl mffviyvdyf hlykpgaidq irggeifefd
       61 itptlltifv avigisalmi llsmtlptgv nratnlvvas lyipvmvfna vgeswewasf
      121 yglsigievl ilafilrsaw twphtapsat mptmptspdr eavraqqqa
//
LOCUS       WP_258069708             548 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Arthrobacter sp. SX1312].
ACCESSION   WP_258069708
VERSION     WP_258069708.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. SX1312
  ORGANISM  Arthrobacter sp. SX1312
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Arthrobacter sp. SX1312"
                     /db_xref="taxon:2058896"
     Protein         1..548
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=56320
     Region          13..432
                     /region_name="efflux_EmrB"
                     /note="drug resistance transporter, EmrB/QacA subfamily;
                     TIGR00711"
                     /db_xref="CDD:129794"
ORIGIN      
        1 mlsvqksrag sglvlavlas gqflmtldss vmnvsmatva adlgttitgi qtaitlytlv
       61 maslmitggk vgtimgrrra falgliiyaa gslttalapn lgvllfgwsl legigaalim
      121 paivslvaan fpperragay glvaaagama vaagpligga vttfaswryv fvgeviivla
      181 illvlrrved vpaakvrldf vgsalsivgl amvvyavlrs gewgwvqskp gaptvlglsp
      241 vvwlmiggll vlyvflrrtt hlaavggepl idpglfrner ltgglsiffa qflvqagvff
      301 tiplflsvvl elsaletgir ifplsvalil aaagipkvwp ranprrvirl glmlmivgil
      361 ilvggmdpga dagivaipml lmgfglgals sqlgaitvsa vpdsqsaevg glqntatnlg
      421 aslgtaligs vliatlstsf magiqnnpav pssvqeeasv qlasgipfis dtqlqealdn
      481 adidqeaada imavnsdsrl ealrvalala allataalfl tgrlpeeavg apdetphrae
      541 ptepaesr
//
LOCUS       WP_258069713             985 aa            linear   BCT 02-MAR-2025
DEFINITION  immunoglobulin-like domain-containing protein [Rathayibacter sp.
            TRS19].
ACCESSION   WP_258069713
VERSION     WP_258069713.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. TRS19
  ORGANISM  Rathayibacter sp. TRS19
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042837.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20578.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Rathayibacter sp. TRS19"
                     /db_xref="taxon:2080526"
     Protein         1..985
                     /product="immunoglobulin-like domain-containing protein"
                     /calculated_mol_wt=101315
     Region          <186..252
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          279..348
                     /region_name="aBig_2"
                     /note="Atrophied bacterial Ig domain; pfam20578"
                     /db_xref="CDD:466727"
     Region          361..451
                     /region_name="aBig_2"
                     /note="Atrophied bacterial Ig domain; pfam20578"
                     /db_xref="CDD:466727"
     Region          488..803
                     /region_name="GH43_Bt3655-like"
                     /note="Glycosyl hydrolase family 43 protein such as
                     Bacteroides thetaiotaomicron VPI-5482 arabinofuranosidase
                     Bt3655; cd08983"
                     /db_xref="CDD:350097"
ORIGIN      
        1 mrslflsala ctsvaltgal vpvsaqavdv paptahydms hagsalldis gngrnatltg
       61 ltdasfanag gdqvarfknd gyaslpqglv tgadnafave ytvktqttan qfgwvigdgv
      121 gpwnttqlgn hvfvnprnpd gspsgqvlag irvkeptsng etrmpfggtl npgfttltlv
      181 gtgtgsstvl tlyrdgtqis tanttksmas ivptgstlgy lgrslysgda lvtadvtdvk
      241 fwdtsltaeq vassmptaaa kasatsallr sdiqpvllag npsltqvssn ltlpasssgv
      301 pltwtssnsa vvsatgvvsr siaqnapvtl tattaqgati afevvvlaps inddldalkl
      361 atrttenlpl avkgarngtd itwtssdpal vtptntsyaa pavgaadpyr gggvvtrpay
      421 gsgdrtvtlt atatlngvte traftltvae lgrtapdagy asayfksdgd ekiyqaatsg
      481 ndfftfspvn ggkavitstt dtkglrdpfi lrshngdkyy mvatdlcisc gtgwgdaqsk
      541 gslkievwes tdlvqwtrtn gadtgitvnq paagmtwape aywddalqsy vvffssrlys
      601 datktnndkl ysrvfsvitr dfrtftappa twqdtgyari dstitkigdy yyrftkneeg
      661 gaagtleagk diflekskvl tagttssnws adpnttwqlt dtrmtsletg qagegpeiik
      721 lnagdpndtt gtgdgyaflv dnygdggyka fltsgaaiag ssqtnrlsqs adwnvspksr
      781 aglpasprhg afvsvpqtvl tamknwtgvt avdstttlta dgrtvtatva aadkgdvvgs
      841 vtftggswts tvplsggsas vsvpadvtgv tasytgyadk lvrtsvsavv pldtlelvpa
      901 vatrcvagki vltatvkntd taaadvtits aygsksftav apgssasaaf ttrlasmpag
      961 tvtvtgsatg qpaftatvpv aatrc
//
LOCUS       WP_258069724             399 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rathayibacter sp. TRS19].
ACCESSION   WP_258069724
VERSION     WP_258069724.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. TRS19
  ORGANISM  Rathayibacter sp. TRS19
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Rathayibacter sp. TRS19"
                     /db_xref="taxon:2080526"
     Protein         1..399
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=40582
     Region          20..336
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(22..23,26,58,108..109,111..113,116,135,138..139,142,
                     210,213..214,217..219,222,246,250,301..302,306,310,325,
                     328..329,332..333,336)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mlkqplavwa vafaaviafm giglvdpilp aiaeslqatp tetsllftsy lvitgvvmff
       61 tswlssriga kktlmiglvl ivvfaalagt agsvegvigf ragwgfgnal fistalstiv
      121 gaaiggssaa ivlyeaalgi giaigpllgg llgsvswrgp ffgtavlmav gfiaiatllr
      181 edgpkpaptp lsapfaalkv pairtlagaa lfynigffvl laytpyplgl demglgftff
      241 gwglgvaits vfvaplltrr lprtvvlrsv llllaldlia gglvissrvg livciivggl
      301 llgvvntvlt ecvmeatdlp rsvassaysg vrflggaiap paasalaaai spafpmyaaa
      361 gavavaamiv mlgrrtlara dahepepelv eaqaitlge
//
LOCUS       WP_258069715             158 aa            linear   BCT 02-MAR-2025
DEFINITION  pilus assembly protein TadG-related protein [Arthrobacter sp.
            SX1312].
ACCESSION   WP_258069715
VERSION     WP_258069715.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. SX1312
  ORGANISM  Arthrobacter sp. SX1312
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 158)
  AUTHORS   Tomich,M., Planet,P.J. and Figurski,D.H.
  TITLE     The tad locus: postcards from the widespread colonization island
  JOURNAL   Nat Rev Microbiol 5 (5), 363-375 (2007)
   PUBMED   17435791
REFERENCE   2  (residues 1 to 158)
  AUTHORS   Kachlany,S.C., Planet,P.J., Bhattacharjee,M.K., Kollia,E.,
            DeSalle,R., Fine,D.H. and Figurski,D.H.
  TITLE     Nonspecific adherence by Actinobacillus actinomycetemcomitans
            requires genes widespread in bacteria and archaea
  JOURNAL   J Bacteriol 182 (21), 6169-6176 (2000)
   PUBMED   11029439
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13400.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Arthrobacter sp. SX1312"
                     /db_xref="taxon:2058896"
     Protein         1..158
                     /product="pilus assembly protein TadG-related protein"
                     /calculated_mol_wt=15875
ORIGIN      
        1 mtrrtggadt tadrseegqi gvlvigyllv cllvitvvla vsavyiehkk llsvadgaal
       61 aaadsysidv gvgggdptpp lpalqdsgve esaagylaat gaaarfeqla vdpssgaedg
      121 rtarvvltav vrppivnflv pagipivaqa daraelvr
//
LOCUS       WP_258069792             355 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Arthrobacter sp. SX1312].
ACCESSION   WP_258069792
VERSION     WP_258069792.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. SX1312
  ORGANISM  Arthrobacter sp. SX1312
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 355)
  AUTHORS   Gao,G., Nara,T., Nakajima-Shimada,J. and Aoki,T.
  TITLE     Novel organization and sequences of five genes encoding all six
            enzymes for de novo pyrimidine biosynthesis in Trypanosoma cruzi
  JOURNAL   J Mol Biol 285 (1), 149-161 (1999)
   PUBMED   9878395
REFERENCE   2  (residues 1 to 355)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
REFERENCE   3  (residues 1 to 355)
  AUTHORS   Nygaard,P., Duckert,P. and Saxild,H.H.
  TITLE     Role of adenine deaminase in purine salvage and nitrogen metabolism
            and characterization of the ade gene in Bacillus subtilis
  JOURNAL   J Bacteriol 178 (3), 846-853 (1996)
   PUBMED   8550522
REFERENCE   4  (residues 1 to 355)
  AUTHORS   Lollier,M., Jaquet,L., Nedeva,T., Lacroute,F., Potier,S. and
            Souciet,J.L.
  TITLE     As in Saccharomyces cerevisiae, aspartate transcarbamoylase is
            assembled on a multifunctional protein including a
            dihydroorotase-like cryptic domain in Schizosaccharomyces pombe
  JOURNAL   Curr Genet 28 (2), 138-149 (1995)
   PUBMED   8590465
REFERENCE   5  (residues 1 to 355)
  AUTHORS   Jabri,E., Carr,M.B., Hausinger,R.P. and Karplus,P.A.
  TITLE     The crystal structure of urease from Klebsiella aerogenes
  JOURNAL   Science 268 (5213), 998-1004 (1995)
   PUBMED   7754395
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01979.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Arthrobacter sp. SX1312"
                     /db_xref="taxon:2058896"
     Protein         1..355
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=37929
     Region          34..336
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
     Site            order(44,46,177,197,270)
                     /site_type="active"
                     /db_xref="CDD:238617"
ORIGIN      
        1 mllsptrtvp dvyvqegrft frrppgrplr tiegwvlpgl vdahchvgld rrgrvpdela
       61 eqqalqdrda gtllirdagv vndtrwvqdr adlprlvrag rhvartqryf rdyavevepa
      121 dlagavaeqa rrgdgwvkiv gdwidrslgd lapafppeal kdavdaahae garvtahcfa
      181 aetldgmlda gidciehatg mlprhvprfv eqgvaivptl inidtfpaia dgaagkypdy
      241 aahmrrlwgg reamvrrayd agiavyagtd agsviahgrl pdevtalaaa glgpaaalda
      301 acwsarawlg fpaieegasa davvcaadpr ldvgtlaslr avvlrgevma rtppe
//
LOCUS       WP_258069820             342 aa            linear   BCT 02-MAR-2025
DEFINITION  thioesterase domain-containing protein [Arthrobacter sp. SX1312].
ACCESSION   WP_258069820
VERSION     WP_258069820.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. SX1312
  ORGANISM  Arthrobacter sp. SX1312
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 342)
  AUTHORS   Schneider,A. and Marahiel,M.A.
  TITLE     Genetic evidence for a role of thioesterase domains, integrated in
            or associated with peptide synthetases, in non-ribosomal peptide
            biosynthesis in Bacillus subtilis
  JOURNAL   Arch Microbiol 169 (5), 404-410 (1998)
   PUBMED   9560421
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013166.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00975.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Arthrobacter sp. SX1312"
                     /db_xref="taxon:2058896"
     Protein         1..342
                     /product="thioesterase domain-containing protein"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=38643
     Region          <17..175
                     /region_name="entF"
                     /note="enterobactin non-ribosomal peptide synthetase EntF;
                     PRK10252"
                     /db_xref="CDD:236668"
     Region          <139..>177
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 mhehdpvihe qdddgralrq ardfressrr sfligsaaat vvaadlvatr viqsqrdqtr
       61 ilplddedar arfpndrwvl fpgyktswee glwilnslrp alsrraqmav mgysnrgldi
      121 nnvvatmnry vdnfrlekly fyghsfggmv avevaarlrd rgipvelifl dsspssrydv
      181 rdarmfdgvv rlyeagvrvp islrgtyelg erivhknert wsqivnqtle qlsplapsse
      241 liqtessyiy hfdvsrfrls lgdtkvvfag npkdgvvdyt taragwarsl pdnvvsvdhr
      301 tdgalpahas pqwnpviyqd vlsavqreyv pvprgggwks ff
//
LOCUS       WP_258069895             324 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5996 family protein [Arthrobacter sp. SX1312].
ACCESSION   WP_258069895
VERSION     WP_258069895.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. SX1312
  ORGANISM  Arthrobacter sp. SX1312
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 324)
  AUTHORS   Watanabe,K., Hotta,K., Nakaya,M., Praseuth,A.P., Wang,C.C.,
            Inada,D., Takahashi,K., Fukushi,E., Oguri,H. and Oikawa,H.
  TITLE     Escherichia coli allows efficient modular incorporation of newly
            isolated quinomycin biosynthetic enzyme into echinomycin
            biosynthetic pathway for rational design and synthesis of potent
            antibiotic unnatural natural product
  JOURNAL   J Am Chem Soc 131 (26), 9347-9353 (2009)
   PUBMED   19514719
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039315.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19459.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Arthrobacter sp. SX1312"
                     /db_xref="taxon:2058896"
     Protein         1..324
                     /product="DUF5996 family protein"
                     /calculated_mol_wt=35419
     Region          22..314
                     /region_name="DUF5996"
                     /note="Family of unknown function (DUF5996); pfam19459"
                     /db_xref="CDD:466096"
ORIGIN      
        1 mrghgtmsgt ttaggtttag gwpalrvedw qdtratlhmw lqvvgkvrma haplvnhwwq
       61 vpfyvtprgw atssipygng mfdlefdvvh hrllvrtssg edrsvplepq svarfherti
      121 aalagvgida pirpvptevd pavpfaedhg hasydpaavt afwrqliqae rvltrfraef
      181 lgkvspvhff wggmdlactr fsgrpapihp ggapncadwv meegyshels scgfwpggge
      241 egafysyayp epegyrdapv dvegafysae fsqfllpyea vrtatdpdav llaflratyd
      301 aaattggwdg glltdpqrld vhar
//
LOCUS       WP_258069924             500 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Arthrobacter sp. SX1312].
ACCESSION   WP_258069924
VERSION     WP_258069924.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. SX1312
  ORGANISM  Arthrobacter sp. SX1312
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Arthrobacter sp. SX1312"
                     /db_xref="taxon:2058896"
     Protein         1..500
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=51579
     Region          5..494
                     /region_name="PRK14995"
                     /note="SmvA family efflux MFS transporter"
                     /db_xref="CDD:184957"
ORIGIN      
        1 magrrewfal avlmlpvllv svdntvlsfa lpeisrhfat sgttllwivd syplvlagll
       61 vamgsfgdrf grrrlliiga vgfavfsvva afaptaaflv aarvglgvfg amlmpstlsl
      121 irnifldrnq rriaiavwaa gfsagaalgp llggallehf wwgsvfllav pvlvlmlalt
      181 pvlvpeskds hpglvdyasi vlsigtmlpv vyaiknlakg gpllisvtaa figiaagtvf
      241 varqlqrrnp mldvrlftvr afsgavlvnl faifslvgfl ffvsqhlqlv lglspldagl
      301 vllpgllvti iaglavvpla rrgrphlvvs valmfsavay amiallgegg sagflmaafv
      361 ilgigvgase tvsndlilss vpaakagaas avsetayevg svlgtavlgs illasyqrnl
      421 llptglssgq agtstetlgg avevatqlgp tsaallrdsa fhafdsgvtl tsgiaallmv
      481 gasvlaawsl rnttaervdh
//
LOCUS       WP_258069980             433 aa            linear   BCT 02-MAR-2025
DEFINITION  GmrSD restriction endonuclease domain-containing protein
            [Arthrobacter sp. SX1312].
ACCESSION   WP_258069980
VERSION     WP_258069980.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. SX1312
  ORGANISM  Arthrobacter sp. SX1312
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 433)
  AUTHORS   Gao,H., Gong,X., Zhou,J., Zhang,Y., Duan,J., Wei,Y., Chen,L.,
            Deng,Z., Wang,J., Chen,S., Wu,G. and Wang,L.
  TITLE     Nicking mechanism underlying the DNA phosphorothioate-sensing
            antiphage defense by SspE
  JOURNAL   Nat Commun 13 (1), 6773 (2022)
   PUBMED   36351933
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 433)
  AUTHORS   Machnicka,M.A., Kaminska,K.H., Dunin-Horkawicz,S. and Bujnicki,J.M.
  TITLE     Phylogenomics and sequence-structure-function relationships in the
            GmrSD family of Type IV restriction enzymes
  JOURNAL   BMC Bioinformatics 16, 336 (2015)
   PUBMED   26493560
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019151.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07510.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Arthrobacter sp. SX1312"
                     /db_xref="taxon:2058896"
     Protein         1..433
                     /product="GmrSD restriction endonuclease domain-containing
                     protein"
                     /calculated_mol_wt=43900
     Region          <41..>145
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     Region          186..325
                     /region_name="DUF1524"
                     /note="Protein of unknown function (DUF1524); pfam07510"
                     /db_xref="CDD:462188"
     Region          397..431
                     /region_name="Excalibur"
                     /note="Excalibur calcium-binding domain; pfam05901"
                     /db_xref="CDD:428664"
ORIGIN      
        1 mvigliaggv sgglimaatv alftglytll tnrpswarlg grkagaitag aavvamlagg
       61 aiapasdtvp tavaeqstas aeatstsapt asatpsakpt psakptpstk qsptpsptps
      121 dvapvdtdtp advtgtprap sdqpafntta lavletlpik grapktgydr eefgqawadv
      181 drngcdtrnd mlnrdltgia yansvpckvq sgilddpytg tkipfrrgqa tssdvqidhv
      241 valsdawqkg aqqltfdqrv afandplnlq stdgptnqqk sdgdaatwlp pnkgyrceyv
      301 arqvsvkaty tlwvtqaehd amatilsdcn gilaptnqia psvaapaepv etpapapvvv
      361 pvapapapva papapvapva papapvapap apaapyyqnc davraagaap iaagspgfqq
      421 kfdrdgdgig cds
//
LOCUS       WP_258069989             265 aa            linear   BCT 02-MAR-2025
DEFINITION  nitrilase-related carbon-nitrogen hydrolase [Arthrobacter sp.
            SX1312].
ACCESSION   WP_258069989
VERSION     WP_258069989.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. SX1312
  ORGANISM  Arthrobacter sp. SX1312
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 265)
  AUTHORS   Pace,H.C. and Brenner,C.
  TITLE     The nitrilase superfamily: classification, structure and function
  JOURNAL   Genome Biol 2 (1), REVIEWS0001 (2001)
   PUBMED   11380987
REFERENCE   2  (residues 1 to 265)
  AUTHORS   Bork,P. and Koonin,E.V.
  TITLE     A new family of carbon-nitrogen hydrolases
  JOURNAL   Protein Sci 3 (8), 1344-1346 (1994)
   PUBMED   7987228
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012993.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00795.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Arthrobacter sp. SX1312"
                     /db_xref="taxon:2058896"
     Protein         1..265
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /GO_process="GO:0008152 - metabolic process [Evidence
                     IEA]"
                     /calculated_mol_wt=28035
     Region          4..262
                     /region_name="nitrilase"
                     /note="Nitrilase superfamily, including nitrile- or
                     amide-hydrolyzing enzymes and amide-condensing enzymes;
                     cl11424"
                     /db_xref="CDD:448250"
     Site            order(42,107,111,115,141..142,144..145,166)
                     /site_type="active"
                     /db_xref="CDD:143587"
     Site            order(42,107,141)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:143587"
     Site            order(108..111,114,121..123,142,144..148,151..152,
                     190..191,193..195,197..198,215..216,257..260)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143587"
ORIGIN      
        1 mpalavlqaa gtvdaveenl rrldgyaara aaqgaevlvt pelfatgyap tlvaesdgqs
       61 vrdalacmar ryrialvgss veatpdarhi taslfdrqga eltryrkahl fgaeeqavfa
      121 pgdelpevvp llgmgvalgi cydvefpefv rsatqrgadl llvptavptt gdvgnrppvh
      181 tynaeristl lvparaleng vyiayanhta pgftglscia spygtflgla gggeellfag
      241 vdqaevrrar elntyltcrr pelfg
//
LOCUS       WP_258070035             156 aa            linear   BCT 02-MAR-2025
DEFINITION  LysM peptidoglycan-binding domain-containing protein [Arthrobacter
            sp. SX1312].
ACCESSION   WP_258070035
VERSION     WP_258070035.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. SX1312
  ORGANISM  Arthrobacter sp. SX1312
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Bateman,A. and Bycroft,M.
  TITLE     The structure of a LysM domain from E. coli membrane-bound lytic
            murein transglycosylase D (MltD)
  JOURNAL   J Mol Biol 299 (4), 1113-1119 (2000)
   PUBMED   10843862
REFERENCE   2  (residues 1 to 156)
  AUTHORS   Joris,B., Englebert,S., Chu,C.P., Kariyama,R., Daneo-Moore,L.,
            Shockman,G.D. and Ghuysen,J.M.
  TITLE     Modular design of the Enterococcus hirae muramidase-2 and
            Streptococcus faecalis autolysin
  JOURNAL   FEMS Microbiol Lett 70 (3), 257-264 (1992)
   PUBMED   1352512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01476.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Arthrobacter sp. SX1312"
                     /db_xref="taxon:2058896"
     Protein         1..156
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=15947
     Region          <103..153
                     /region_name="PRK14125"
                     /note="cell division suppressor protein YneA; Provisional"
                     /db_xref="CDD:184523"
ORIGIN      
        1 mvtpvlhgss lwtparpdgh lrlvptpesp asptasatss fmapshpsmq rsagrpltlt
       61 rrgrlllvgl pialgvaali llaafltsqa qagesaptat atvevsvvtg etlwdlavrh
      121 aperdprdvv aeivelndlp ssvvqagqsi avpaag
//
LOCUS       WP_258070075             759 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Acidovorax radicis].
ACCESSION   WP_258070075
VERSION     WP_258070075.1
KEYWORDS    RefSeq.
SOURCE      Acidovorax radicis
  ORGANISM  Acidovorax radicis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Acidovorax.
REFERENCE   1  (residues 1 to 759)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Acidovorax radicis"
                     /db_xref="taxon:758826"
     Protein         1..759
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=83095
     Region          34..181
                     /region_name="GAF_2"
                     /note="GAF domain; pfam13185"
                     /db_xref="CDD:433019"
     Region          <186..753
                     /region_name="PRK09776"
                     /note="putative diguanylate cyclase; Provisional"
                     /db_xref="CDD:182070"
ORIGIN      
        1 mtlppdpmap hdpqerrhsd allqlckrle rawtlsdvld avkpmgesvf dyrhvwlali
       61 ddasgmldfl thtsggeesa lsrqlqtmki pvkgdallee imqathvvvv edartdprtn
      121 kavvavlhnr tivnvplima nqrlgalgmg tygdeegvrp pkpwqialmq ataghlaval
      181 drvrfmtaqr eaeeallqek erlqvtlhsi sdavvttdaa glvqylnpaa qaltgwslta
      241 acgrrhqevl glaieagadt apdlvgrala qgstqlhgkl rstpqagapl lmdlsaspll
      301 rpgghadgvv lvfrdvteas rlsremefqa mhdtltslgn rrafehllaq afaatrdara
      361 hhcvcyldld nfkvindtcg haagdellrq varlflahlq pqdllcrlgg defgillwqq
      421 dlqqalqlae rmqqglaafr fgwrdhvfsv svsigavmld aatesvgall qaadsacyva
      481 kdggrnrihv yaendpalaq rygvmewvsr iehalqhdrf elfgqpitrl gpahgsqphg
      541 lhceillrmr tadgqlvspg efmpaveryh laarvdrwvi knalawmaeh qdrvelccin
      601 lsgqsvgdaa flsqvlqamd qtsvrcdrlc feitetaamg dlaaanrffh alrargcqfa
      661 lddfgsglss yaylrelavd mlkidgqfvk hmaddpvsfa mvksiheigc lmgkktvaef
      721 aesqaivnll tglgvhfaqg yalgrpapid ellletmtq
//
LOCUS       WP_258070095             419 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Clavibacter michiganensis].
ACCESSION   WP_258070095
VERSION     WP_258070095.1
KEYWORDS    RefSeq.
SOURCE      Clavibacter michiganensis
  ORGANISM  Clavibacter michiganensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Clavibacter.
REFERENCE   1  (residues 1 to 419)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Clavibacter michiganensis"
                     /db_xref="taxon:28447"
     Protein         1..419
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=42418
     Region          23..402
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mssavdaarp gdgderadag dvdpvdlave liridstnpd lvaggageaa vaahaaawlr
       61 argfrvrvle gtpgrltvla targtgggrt illdghldtv ppgdpvrggt apvvedgrll
      121 grgafdmkag laammvaadr arrigtrgdv vlalvadeef asigteealr alaadgtvvd
      181 gavisepsqs eaivahrgfg wyevrlrgra ahgsmpeqgv daiahaglvl reldalagrl
      241 avgprhpllg tgavrvsrih ggsdaatvad acvltverrf lpgqstaeve aelraalsav
      301 aartpgmaae lvvlvaraaf eadiegplar avldsgarvt gapvphrgep fwtdaglvqe
      361 agipcillgv tgggahadee waevdsvrrl advlegaild fcgsvgdgaa gtgraepag
//
LOCUS       WP_258070122             339 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Clavibacter
            michiganensis].
ACCESSION   WP_258070122
VERSION     WP_258070122.1
KEYWORDS    RefSeq.
SOURCE      Clavibacter michiganensis
  ORGANISM  Clavibacter michiganensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Clavibacter.
REFERENCE   1  (residues 1 to 339)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Clavibacter michiganensis"
                     /db_xref="taxon:28447"
     Protein         1..339
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=35130
     Region          20..252
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(24,26..27,29,48..50,77..79,110..112,139,143,
                     163..166)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(89,112,139,143)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 msgaavrdga agatpaprdv lvlggtawig glvaarlaar gdrvtclarg tggpapdgtr
       61 lvradrdrad ayaavestew devvdltssa ehartavaal adrarhwtlv stvsvyaapa
      121 rpgddetaav vepvdledyg qakaaaerav taalagrrmi vrpglvvgpg ddsdrfgywp
      181 araalagdgp vlvpdaegrr aqvidardlv dlvvdvgarr ldgvvdavge svpladvldl
      241 aaeaagstge rvvatdaqlt aadvrhwagp rslplwlprd aigltarsda girvlgarrr
      301 plaetvrdvl dderargldr prrsgltrae elqvlaalg
//
LOCUS       WP_258070086             555 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Acidovorax radicis].
ACCESSION   WP_258070086
VERSION     WP_258070086.1
KEYWORDS    RefSeq.
SOURCE      Acidovorax radicis
  ORGANISM  Acidovorax radicis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Acidovorax.
REFERENCE   1  (residues 1 to 555)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 555)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 555)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 555)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 555)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 555)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 555)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 555)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 555)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Acidovorax radicis"
                     /db_xref="taxon:758826"
     Protein         1..555
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=61861
     Region          169..>550
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 misselltdl lapigeghie pmaqarlqal vdavpvalme frlqhgrlll laanaaarrm
       61 pglgavrnpg adacevfdll agtplmdqlq gvarvgaple crqvvrepgr lllawdlsar
      121 rvttdcivvt vrdateaetl raalaasera leevrrelre qtevfntmes lartghwrri
      181 edpgetvllw spglcdiagf eqqewvdper avsgilpedr hvfdtprvpg agldveyrwr
      241 rpdgevrwmr srvqrtlprd gvqvvmgvvq dvtdehraae qlreqllfiq riasripgfi
      301 yeyrlhadgg tsvqyisdav rdfmgvepsq vtadhgvlmh rvlpedlpqv qrsaitsvrk
      361 lvpwqceyrv rmpdgsvrwh mtnaiphrep dgsvvshgft mditdrkrae qeierlaffd
      421 altglpnrrl lldrlqrsia acqrtrnlga llfidldnfk dlndtlghdm gdqllaqvat
      481 rlvgsvread tvarfggdef vvmlealapt cktppprqkp sqkkllasln qpfdldgaqh
      541 ystpsigitl latna
//
LOCUS       WP_258070194             662 aa            linear   BCT 02-MAR-2025
DEFINITION  glycogen debranching N-terminal domain-containing protein
            [Clavibacter michiganensis].
ACCESSION   WP_258070194
VERSION     WP_258070194.1
KEYWORDS    RefSeq.
SOURCE      Clavibacter michiganensis
  ORGANISM  Clavibacter michiganensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Clavibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026092.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14742.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Clavibacter michiganensis"
                     /db_xref="taxon:28447"
     Protein         1..662
                     /product="glycogen debranching N-terminal
                     domain-containing protein"
                     /calculated_mol_wt=69569
     Region          30..211
                     /region_name="GDE_N_bis"
                     /note="N-terminal domain of (some) glycogen debranching
                     enzymes; pfam14742"
                     /db_xref="CDD:434175"
     Region          245..635
                     /region_name="GDB1"
                     /note="Glycogen debranching enzyme (alpha-1,6-glucosidase)
                     [Carbohydrate transport and metabolism]; COG3408"
                     /db_xref="CDD:442634"
ORIGIN      
        1 mndrpaasdp laavrrdetl qpllhaetvl lrapvqawsa pdgdmggapv hgiylgdtri
       61 lsrvaltvgg qhgepiahar ssasagehva llrhlddada dprvrlvrrr evdgtslret
      121 vtlesarmta vpttvevrlr vdasvmhvik aglvddvepr lartddgvaw eadgtdarll
      181 apgaevavdg ravalrwpvv ipargrvavs wsvtaestaa vvgpatsdpe wagvrvesgd
      241 srlgrwvata lddlsglrmv ttarpdepfl aagapwfftl fgrdslwaar mmlplgtgia
      301 astlrvlagl qgahedaata eqpgkimhel rpgvltipge dvslpplyyg tvdatplwit
      361 llhdawragm pedeveallp hleaalgwlr dhadqdgdgf leyrdesghg lanqgwkdsg
      421 dsiqwqdgtl aegpialcev qayaheaavg aaallerfgr padewrayaa amrerfaraf
      481 widdgegghp aialdaakrp vdtltsnigh llgtgilspe haarvaellv sprldsgfgl
      541 rtlatdaagy wplsyhggsv wthdtaiait glaregfade aatlarglla aaedfgyrvp
      601 elhsgdaaad vptavpypaa crpqawsaas aiavlgvatg ggpagaapnp avagavsvhg
      661 rd
//
LOCUS       WP_258070203             244 aa            linear   BCT 02-MAR-2025
DEFINITION  prepilin peptidase [Clavibacter michiganensis].
ACCESSION   WP_258070203
VERSION     WP_258070203.1
KEYWORDS    RefSeq.
SOURCE      Clavibacter michiganensis
  ORGANISM  Clavibacter michiganensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Clavibacter.
REFERENCE   1  (residues 1 to 244)
  AUTHORS   Albers,S.V., Szabo,Z. and Driessen,A.J.
  TITLE     Archaeal homolog of bacterial type IV prepilin signal peptidases
            with broad substrate specificity
  JOURNAL   J Bacteriol 185 (13), 3918-3925 (2003)
   PUBMED   12813086
REFERENCE   2  (residues 1 to 244)
  AUTHORS   LaPointe,C.F. and Taylor,R.K.
  TITLE     The type 4 prepilin peptidases comprise a novel family of aspartic
            acid proteases
  JOURNAL   J Biol Chem 275 (2), 1502-1510 (2000)
   PUBMED   10625704
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013632.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01478.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Clavibacter michiganensis"
                     /db_xref="taxon:28447"
     Protein         1..244
                     /product="prepilin peptidase"
                     /EC_number="3.4.23.43"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=22556
ORIGIN      
        1 mipaaasafa taapelatal vgagglagaa vgavapalar walgggrrrg lvppaadppa
       61 adpsagpglg rrsaavaala tgaltaavva gtptprlpla llllavgpvl vvadlaahrl
      121 pdratgpaav aaaalalaag gpgllvqalm gglgavlvla llqaataggl gsgdvklagv
      181 iglvlgqlga aqvalglaag tllgglaala llvvdhrrap aaipfgpwll lgallvaasp
      241 ttia
//
LOCUS       WP_258070210             200 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Clavibacter
            michiganensis].
ACCESSION   WP_258070210
VERSION     WP_258070210.1
KEYWORDS    RefSeq.
SOURCE      Clavibacter michiganensis
  ORGANISM  Clavibacter michiganensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Clavibacter.
REFERENCE   1  (residues 1 to 200)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 200)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Clavibacter michiganensis"
                     /db_xref="taxon:28447"
     Protein         1..200
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=20895
     Region          9..175
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(14,39,67,154,157)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(14,154,157)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(14,39,67)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
ORIGIN      
        1 maprtrttvl lgdsltadgr wdaivpdgda rivdrgrpgq ttddvlallp evvaedpstv
       61 vlscgthdlg aarrgpeqtv raletiladl rrdlpaarlv ivsvpprgre haeririvnv
      121 hlrqyapavr aehvdlwpal gfgdgeldpt lsddrlhltd dgaaavravl apvlaprdgg
      181 addadaapdg sgasedpaga
//
LOCUS       WP_258070313             129 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5675 family protein [Vibrio jasicida].
ACCESSION   WP_258070313
VERSION     WP_258070313.1
KEYWORDS    RefSeq.
SOURCE      Vibrio jasicida
  ORGANISM  Vibrio jasicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040141.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18925.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Vibrio jasicida"
                     /db_xref="taxon:766224"
     Protein         1..129
                     /product="DUF5675 family protein"
                     /calculated_mol_wt=14092
     Region          3..113
                     /region_name="DUF5675"
                     /note="Family of unknown function (DUF5675); pfam18925"
                     /db_xref="CDD:465915"
ORIGIN      
        1 mgettlgklt iegvskswfv lepagpdsit egsdkrikag tykllpyssp kypnvyelqn
       61 vpgrtfilih agnyhkdtlg clmpgktwgs vakshyyvgn sksalkeifs eiasnkkiti
      121 nisnqleqq
//
LOCUS       WP_258070331            2651 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Vibrio jasicida].
ACCESSION   WP_258070331
VERSION     WP_258070331.1
KEYWORDS    RefSeq.
SOURCE      Vibrio jasicida
  ORGANISM  Vibrio jasicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040192.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19078.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..2651
                     /organism="Vibrio jasicida"
                     /db_xref="taxon:766224"
     Protein         1..>2651
                     /product="Ig-like domain-containing protein"
     Region          2409..2493
                     /region_name="Big_12"
                     /note="Bacterial Ig-like domain; pfam19078"
                     /db_xref="CDD:436946"
     Region          2514..>2651
                     /region_name="tail_200_repeat"
                     /note="tandem large repeat; NF032891"
                     /db_xref="CDD:467960"
ORIGIN      
        1 maaslllsac gggdggdntp parntgsisg nvfdapvnga kievfeykdg kvgrllastt
       61 sdafgdykle fesssmplyv vaqqgsytdp ltkeivsssa gktlrlegvv nfsegsdqkl
      121 mltpltnivs glakykisgg esgsdavsea ldsingmygf nvnettpidi tkggqssfat
      181 pghqygallt ayssfsydli ekygqsednv ytsmhfadiq frdviadgll dgleisdstg
      241 avtpltfgqq ritsdvytqd lsqhvlivvn dpelnisgtd addyvafsqk indlgshgtt
      301 dgvipprdet eidttpptvt rtdsdvlart dsveirlndd igvqsvsayv qyqlhgawsg
      361 efkcndqqts gsefcsvdas gfevgvretn ikvsvdtkai davevdsetg lsnvtaarlv
      421 lytadvlgne lvpgsnsghy vnfewdndap visvtsasai nnelqeyvlk givkeasqdi
      481 ksvsvsfksg lpedvactpv taesgsacef skayltdefl stttfdikat dtkdnvgeyq
      541 havsrddqap aqiitypegt smnyvnvtvd gerstyegvy tqdtytsdtv qssrdylkid
      601 yvyaasglks iqgvdfadfh vnvlkenkip yvrvrvsdvn setvlgssad klklvvkyyv
      661 sqnndnnyaf qnttqtvast dtitasiphe tildsegrvd eviyyvpfvk evlgdgfknv
      721 senasqklvi qtidesdnes atqevyfrss fdlptmtvvt pfigarvqle glnpngefts
      781 lascttiqqp esdqtsaldv asceattdvv nyefmrvrli gvegtdphyy qwkddagaka
      841 svnlnnanig ayfeldgsnt yyvtelatyq tglfdyrwnq veagdktser asqiltdvky
      901 alaggndsff gfdptitaya tnemleetip sdlsndylhr flveaiddls qntprnnssd
      961 fasaiyddls ydgkangiga ggnqiqldgy vfkpdtyrkd laqsyynimt ekygipdnia
     1021 qlyaddista npklgednif dsgggsidiy ppkqtltiet grttmvgdkl yvagevvsrv
     1081 vledpsgvve egdqapkfqs mwyavgdpnt eiplelkpqe sgdsnkfrke yfftlntesa
     1141 dltdiiefal ettafdtkgn gyteadplve rlyvdndype asyippigpd nnpigedvyl
     1201 sirnnihdlt felddvvddk lekrsllfyk tsgerypvsy eqfytnqsdr fvvrlcsqed
     1261 cstqgttinp gdgdwlavvs aednlgnavs dadngaprfr iyidsespvv ndaeiterlg
     1321 gndvwtpvid wgdlsqgsnv kvelrkgsgq sqtleacdpe tsvcdqpyli geqpdvkvql
     1381 vaeafnydsk nefyvtatdk aypanesrkg tfsfqvdnkg pvillstpwi edalnkentv
     1441 vgrefnvlfe svtddsgiee vslfqvdnpt vlktfkpenp sqkfemplve detknidlne
     1501 gnrirlyvka kdvhgfesqs ntnsvvfdnq gpefslmghd vnsyynsdyv felratdlgp
     1561 ngndspegvd resleywifd gelapgtpgt kivnadalki plggqsdgeh tirvkgsdtr
     1621 gnsstsdfli nvsskkpdlk lgityangds egqeinnnvv ydngdikltl evndvsgvnk
     1681 iistykysge snatdfqfsk vddseevwea tltqaqlsid gnyelsisve nnvqhngtpl
     1741 vsninrtlsv qrngveleia epaptdfqsy vsdgvldvkf ttksevkaak iqcwvrqeys
     1801 sevapppeek ptsgeknisp gqdpscsvds eeaslkpavl ivqtkgtnga vavqkfdfqm
     1861 mdaeapetvs pkddkfefqg gevsydsdds tkylafdlif kdelsgvdin dkpqlsktsg
     1921 dttfdakscv lngegqavcr ykekyydiir kldgkypyii knikdnagnl asdhafefvl
     1981 ptqkpdvkit spegndvlng eyldvdfrvk laenskienv svtfggesyd sknnadnfrn
     2041 fnectdddtf lcstfrsdkl dedlanrsln vnvtvtdvwd nagsadveni rfdnaapvig
     2101 dmitvteqpd dkvrftfvem kddvsglakv kytvraldfe eektnkendk eyityfelsk
     2161 gelsglnqik veviakdavd nqssedktid ltvptitlsf ndmtsllggk laftkesqsf
     2221 titstegehv kathysidmv pttgdplnfn gnivsssatg tmdfaiddqa eyiykvtvtd
     2281 smgraikdft lfnntynaeg iasvvdyedp evsivdttqd dkatddgkyq ldvtaqvtdk
     2341 nlssvtstad ngsglavgpq siteptndge pyvfhyllsp gnytikviat davgnqkdgq
     2401 ttyevvaatv peltisttas tplaggveap ltltfteevt efdisdvkld ennggelkpl
     2461 swsttdnitw tatyvtpkde nkrvtisved nsyksvnnid grgyslqldv dgvlptltkv
     2521 tfdplhqeig kavdvklefd kelqeakatl gannvtslts dpadkkvwtg tvnvpdvpel
     2581 gvglvvsqyk dlvgnvgddn tsyelpitpt laitpvgnvd gtnaaslqia gtstrfdgqt
     2641 vnveikaqgs e
//
LOCUS       WP_258070339             172 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: toxin-activating lysine-acyltransferase [Vibrio].
ACCESSION   WP_258070339
VERSION     WP_258070339.1
KEYWORDS    RefSeq.
SOURCE      Vibrio
  ORGANISM  Vibrio
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Trent,M.S., Worsham,L.M. and Ernst-Fonberg,M.L.
  TITLE     HlyC, the internal protein acyltransferase that activates hemolysin
            toxin: role of conserved histidine, serine, and cysteine residues
            in enzymatic activity as probed by chemical modification and
            site-directed mutagenesis
  JOURNAL   Biochemistry 38 (11), 3433-3439 (1999)
   PUBMED   10079090
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014813.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02794.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Vibrio"
                     /db_xref="taxon:662"
     Protein         1..172
                     /product="toxin-activating lysine-acyltransferase"
                     /GO_component="GO:0005737 - cytoplasm [Evidence IEA]"
                     /GO_function="GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009404 - toxin metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=20125
     Region          52..>138
                     /region_name="HlyC"
                     /note="RTX toxin acyltransferase family; cl01131"
                     /db_xref="CDD:470089"
ORIGIN      
        1 mmgkqmslir iselnerflk rkssgkskha iqgelgrfle vfsdsdrnri diqsflhwvk
       61 pailhdqytl lklngnvdfs gyvmwawvdv dtlekylned rfvihpmnwn egynlivvdf
      121 fikdksckqa mmrsmyrqar nladlshkdi nicirddfgk ivkvkgarye da
//
LOCUS       WP_258070550             417 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Pseudoclavibacter sp. AY1F1].
ACCESSION   WP_258070550
VERSION     WP_258070550.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. AY1F1
  ORGANISM  Pseudoclavibacter sp. AY1F1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Pseudoclavibacter sp. AY1F1"
                     /db_xref="taxon:2080583"
     Protein         1..417
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=45908
     Region          22..396
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mpneghstst tavaadgerp lkiliagdtf tpnvngaakf tehlasgmaa rghdvhvivp
       61 aasrrhgtwt eeydgqkvta hrlrshrwwa hdwlryappw hiraeservv devrpdvvhf
      121 qsaviigrgv aieaekrgir iigtnhlmie nlvdhsllpq alrgiaasiw wkdarstlgr
      181 asaittptrr aadfleangg isdvlaiscg irtsdytfdf spreskrilf vgrvtgekki
      241 dvllraltll psdvgldivg ggdqkknlqs lakqlgladr vtfhgylsdq elrrmytras
      301 vfampsiael qsiatmeama sgqpvvaada malphlvhdg engflfepnn erdladklsq
      361 vlalsssere emaragldlv rmhdidrtle lferlyrgas vkevardsvn eqdhsld
//
LOCUS       WP_258070638             255 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Pseudoclavibacter sp. AY1F1].
ACCESSION   WP_258070638
VERSION     WP_258070638.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. AY1F1
  ORGANISM  Pseudoclavibacter sp. AY1F1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
REFERENCE   1  (residues 1 to 255)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Pseudoclavibacter sp. AY1F1"
                     /db_xref="taxon:2080583"
     Protein         1..255
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=26565
     Region          1..248
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mtedsisvli vddesgirmg lrllidgaer icvvgegtng healaladeh dpdvilmdvr
       61 mpglagidav eqltakgara kvvmltafdt eeflldalra gavsfllkda ppedivgavl
      121 daaqgkavfs psaldrlvra aatgasadar tsgdartsgg arasgvtpvs grvgelqrrp
      181 pagqgeslla kvtsrereia ryvaqgmtna eiasalyvsq atvkthlasl fsklhvtnrv
      241 qlallalewd averg
//
LOCUS       WP_258070635             370 aa            linear   BCT 02-MAR-2025
DEFINITION  metal ABC transporter solute-binding protein, Zn/Mn family
            [Pseudoclavibacter sp. AY1F1].
ACCESSION   WP_258070635
VERSION     WP_258070635.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. AY1F1
  ORGANISM  Pseudoclavibacter sp. AY1F1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
REFERENCE   1  (residues 1 to 370)
  AUTHORS   Ilari,A., Alaleona,F., Tria,G., Petrarca,P., Battistoni,A.,
            Zamparelli,C., Verzili,D., Falconi,M. and Chiancone,E.
  TITLE     The Salmonella enterica ZinT structure, zinc affinity and
            interaction with the high-affinity uptake protein ZnuA provide
            insight into the management of periplasmic zinc
  JOURNAL   Biochim Biophys Acta 1840 (1), 535-544 (2014)
   PUBMED   24128931
REFERENCE   2  (residues 1 to 370)
  AUTHORS   Gabbianelli,R., Scotti,R., Ammendola,S., Petrarca,P., Nicolini,L.
            and Battistoni,A.
  TITLE     Role of ZnuABC and ZinT in Escherichia coli O157:H7 zinc
            acquisition and interaction with epithelial cells
  JOURNAL   BMC Microbiol 11, 36 (2011)
   PUBMED   21338480
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 370)
  AUTHORS   Lee,Y.H., Deka,R.K., Norgard,M.V., Radolf,J.D. and Hasemann,C.A.
  TITLE     Treponema pallidum TroA is a periplasmic zinc-binding protein with
            a helical backbone
  JOURNAL   Nat Struct Biol 6 (7), 628-633 (1999)
   PUBMED   10404217
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013465.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01297.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Pseudoclavibacter sp. AY1F1"
                     /db_xref="taxon:2080583"
     Protein         1..370
                     /product="metal ABC transporter solute-binding protein,
                     Zn/Mn family"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=38174
     Region          8..>61
                     /region_name="fliL"
                     /note="flagellar basal body-associated protein FliL;
                     Reviewed; cl00681"
                     /db_xref="CDD:469875"
     Region          44..354
                     /region_name="ZnuA"
                     /note="Zinc-uptake complex component A periplasmic;
                     pfam01297"
                     /db_xref="CDD:460151"
ORIGIN      
        1 mnlrapalia laglstlala acsgpaagtd asaaptadge aftvvatttq vadftreltd
       61 glnvevtqll qpgmsahsfe ptpadlvalg sadlvvssga gleewldaav sssgyagevv
      121 dasanvtlsg shehdhgeea haeeghdhae geehsheeet haeeahaeea hadeeahgeg
      181 nphtwtspan aklmaaeiaa hleelpgida aavqanaday dgelteldtw iaanveavpe
      241 aervvvtnhd alhyyleqyg itfvgsimps fddsaepsaa eidaliaeik ehnvkaifte
      301 tqlspqnaet iaaqtgakvf sgdqalatda lgepgtptgt yvgatvhntq miieswgata
      361 tdvpevlaqq
//
LOCUS       WP_258070659             152 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Vibrio jasicida].
ACCESSION   WP_258070659
VERSION     WP_258070659.1
KEYWORDS    RefSeq.
SOURCE      Vibrio jasicida
  ORGANISM  Vibrio jasicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024908.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13518.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Vibrio jasicida"
                     /db_xref="taxon:766224"
     Protein         1..152
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=17631
     Region          14..>145
                     /region_name="transpos_ISNCY_2"
                     /note="ISNCY family transposase; NF033594"
                     /db_xref="CDD:468103"
ORIGIN      
        1 mlvtlndsdi nrfkviqdvc drrirrvdaa dildlsvrqv qrlmnrlref gavglthqar
       61 gkpsnnryps dyrdtvlkli rdhysdfspt larekllelh slpvsnetlr swmiadglwt
      121 phsqrkpkvy qpryrrdclg eliqivalfe gs
//
LOCUS       WP_258070710             293 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Pseudoclavibacter
            sp. AY1F1].
ACCESSION   WP_258070710
VERSION     WP_258070710.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. AY1F1
  ORGANISM  Pseudoclavibacter sp. AY1F1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
REFERENCE   1  (residues 1 to 293)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Pseudoclavibacter sp. AY1F1"
                     /db_xref="taxon:2080583"
     Protein         1..293
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=31274
     Region          6..280
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(100,107,110..111,113..114,117,125,127,129,173,
                     207..208,227..228,234..235,237..238,256)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176106"
     Site            order(101,150,197..198,205)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:176106"
ORIGIN      
        1 mdlmelrqlr yflavadelh fgraaarlhm tqppltvavr kleeelgvel ferttrnvsl
       61 taagrmfrqr agavledles avadlgdvaa gvagrlrigf vssasysvlp rglqafqelr
      121 prihleprsl tsaeqitlll egeldvgilr dplsvpglha tllegedlva vlpaadalaa
      181 esivpassfh ekavvlfpfe lmpgfvsavm swlgtaqavp rivqsvihqe tvlglvaagv
      241 gasilpasva rfqmpgvvtr pllgsprtel yavesprshp ssallidslr gsk
//
LOCUS       WP_258070333             450 aa            linear   BCT 02-MAR-2025
DEFINITION  linear amide C-N hydrolase [Vibrio jasicida].
ACCESSION   WP_258070333
VERSION     WP_258070333.1
KEYWORDS    RefSeq.
SOURCE      Vibrio jasicida
  ORGANISM  Vibrio jasicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 450)
  AUTHORS   Coleman,J.P. and Hudson,L.L.
  TITLE     Cloning and characterization of a conjugated bile acid hydrolase
            gene from Clostridium perfringens
  JOURNAL   Appl Environ Microbiol 61 (7), 2514-2520 (1995)
   PUBMED   7618863
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014345.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02275.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Vibrio jasicida"
                     /db_xref="taxon:766224"
     Protein         1..450
                     /product="linear amide C-N hydrolase"
                     /calculated_mol_wt=50214
     Region          1..450
                     /region_name="YxeI"
                     /note="Penicillin V acylase or related amidase, Ntn
                     superfamily [Cell wall/membrane/envelope biogenesis,
                     General function prediction only]; COG3049"
                     /db_xref="CDD:442283"
ORIGIN      
        1 mctnfsitgm tldpnknipv vgrsmelgps lkselffrsk gheytqgaak eltpysfesd
       61 efvirpdisl vntklytwkg kydfvalngf stsikesvgv tqmladiasn gmnkegltsg
      121 tmvlvqseyq eplkqdgefk nckgviyyps ittwilsnca tcqdvidglq ydklvvnend
      181 sdlkesdipd edkilvanpf skvpsamhfh fhvqdalgng ivleyvdgkl titdlnpigv
      241 ltndpliawq qenvrynyvd vvpfnfqdnd ghaatpnvet ydnaasrfkc nsnaqgtgfs
      301 kvpgsstpld rfvrasmman fsfpvyqltd dedilaanld smqyrkeals rdirvgkeda
      361 ttlafhilnt vdipqgtsrd stgklvhdyt qwatvsdlvn kkysvrmyes pqifsldlnk
      421 ldfkklekee pyklnigdks iditnkvngr
//
LOCUS       WP_258070777             373 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Pseudoclavibacter sp. AY1F1].
ACCESSION   WP_258070777
VERSION     WP_258070777.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. AY1F1
  ORGANISM  Pseudoclavibacter sp. AY1F1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Pseudoclavibacter sp. AY1F1"
                     /db_xref="taxon:2080583"
     Protein         1..373
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=39345
     Region          59..322
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mrntarrpla aagliatsgl llvgctplag stdasdvpld lappvageia pgaldginlv
       61 yagnggviqe gqtsaiwdpf aeesgatvqq dsyeltklka mvdsdnvswn mvnssilene
      121 rycgelfeki dpakvdlsna pegtvagect vpnifmgyvv ayntdvygdn gpksatdffd
      181 takfpgkrgv pltpwmeapa iefamladga dfdnltvddf hgatdlydsl genlvpwtsg
      241 aqsqqqlesg evdmslvwsg rgfgaanaga piagmweewv vnidgiaipk gtpnldasya
      301 avnyllgadq qaaaseatsy apvnvnavpd vpeltsewlv snhlesghnl kidywvdnwd
      361 eladawttwv agg
//
LOCUS       WP_258070708             342 aa            linear   BCT 02-MAR-2025
DEFINITION  YqaJ viral recombinase family protein [Pseudoclavibacter sp.
            AY1F1].
ACCESSION   WP_258070708
VERSION     WP_258070708.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. AY1F1
  ORGANISM  Pseudoclavibacter sp. AY1F1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
REFERENCE   1  (residues 1 to 342)
  AUTHORS   Vellani,T.S. and Myers,R.S.
  TITLE     Bacteriophage SPP1 Chu is an alkaline exonuclease in the SynExo
            family of viral two-component recombinases
  JOURNAL   J Bacteriol 185 (8), 2465-2474 (2003)
   PUBMED   12670970
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021128.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09588.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Pseudoclavibacter sp. AY1F1"
                     /db_xref="taxon:2080583"
     Protein         1..342
                     /product="YqaJ viral recombinase family protein"
                     /calculated_mol_wt=38184
     Region          126..>305
                     /region_name="COG5377"
                     /note="Phage-related protein, predicted endonuclease
                     [Mobilome: prophages, transposons]"
                     /db_xref="CDD:444142"
ORIGIN      
        1 mvmfrpspdv detswfgepq papksrrrdr elygpaalmd ytapaafaqq ehpaasdvgs
       61 epqaeplhrf ytsetrpala ttalsasevg vwrahgpsge tsaielpatp eveamsahll
      121 rvladsndra awlkaradgv tatdaarlat pasvkqvvkd kvmgnsfsgn aytdfgrqre
      181 peiarwvler hgipasgllf haeaskshla tpdglhcdee grillaeikt tnkvwkripr
      241 symrqiwwqq yvlgaertlm vwerhqdfiv vdrepkfvwi drdeaeiakl vtlanevlkd
      301 vekyrgefaq ystgntqpfq gygnthstsd ytqsfydaet ya
//
LOCUS       WP_258070886             474 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein [Pseudoclavibacter sp.
            AY1F1].
ACCESSION   WP_258070886
VERSION     WP_258070886.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. AY1F1
  ORGANISM  Pseudoclavibacter sp. AY1F1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
REFERENCE   1  (residues 1 to 474)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Pseudoclavibacter sp. AY1F1"
                     /db_xref="taxon:2080583"
     Protein         1..474
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=49695
     Region          23..470
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     Site            order(150..154,162,177,179..180,227..230,233,236..237,
                     249..251,283,377,379,405,444)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143467"
     Site            order(154,249,280,283)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143467"
ORIGIN      
        1 mtarlsvvgh asglsangee livtspadgs vvghvrqhla gdlpeiiera rsgslvaral
       61 srharasvle naavllgqrs dqvarlivae agktivqark evsrcqntlk lsaaqartna
      121 gevvpfdafe gsetrtgwft replgiilai tpyndalnlv ahkigpaiag gnsvilkpsq
      181 ltpltarllv dllvesglpa evittvhgnr qlsqalvsar eirmvsftgg frtgeaiaaa
      241 agikkismel ggnapvlvfg dadlstavar cvsgsfwaag qncigtqrii vhesvadqfr
      301 nefvaatsrl ttgdpsiest dvgpmiseaa ahsaqesvea avaagarlle ggradgayfp
      361 ptvlanvprs qcvwaeeafa pivvietfss feeavdlane peyalhaavf tsslstamra
      421 treleagavm vndssdyrfd ampfggakyg smgregvrfa yedmtqtkvv gile
//
LOCUS       WP_258070961             430 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Pseudoclavibacter sp. RFBG4].
ACCESSION   WP_258070961
VERSION     WP_258070961.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. RFBG4
  ORGANISM  Pseudoclavibacter sp. RFBG4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
REFERENCE   1  (residues 1 to 430)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Pseudoclavibacter sp. RFBG4"
                     /db_xref="taxon:2080575"
     Protein         1..430
                     /product="AMP-binding protein"
                     /calculated_mol_wt=44570
     Region          31..428
                     /region_name="PRK07824"
                     /note="o-succinylbenzoate--CoA ligase"
                     /db_xref="CDD:236108"
ORIGIN      
        1 mgvelgggga rplvrvdard asavtaalrs alsgagpavl ptqpaadala sgecglagev
       61 lgvvpegvvl vietsgstae pkrvmltgda lrasaaatya rfdllfgrar aaeptrqwll
      121 tlpasyvaga qvlmrsilag tepvvlgdgh ftadgfaraa eeltadrryv slvpaqlarl
      181 ldgspavadv varfdailvg gqslppslre raaalgwnla tsygssetsg gsvyngepld
      241 gvrirvrdge vqlagpvlaa gylgdprrta eafveddger wyrtsdggrl erdettgrer
      301 lvvtgrldnv ivsggekvll drvegivrrl pglegavvva aaseewgqvp alvveasawg
      361 apgaeapvaa rlldarelsg derwlavraa vapvgraarp skllvvdhlp qlqsgkpdrr
      421 slerlvaela
//
LOCUS       WP_258071007             139 aa            linear   BCT 02-MAR-2025
DEFINITION  TadE/TadG family type IV pilus assembly protein [Pseudoclavibacter
            sp. RFBG4].
ACCESSION   WP_258071007
VERSION     WP_258071007.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. RFBG4
  ORGANISM  Pseudoclavibacter sp. RFBG4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
REFERENCE   1  (residues 1 to 139)
  AUTHORS   Kachlany,S.C., Planet,P.J., DeSalle,R., Fine,D.H. and Figurski,D.H.
  TITLE     Genes for tight adherence of Actinobacillus actinomycetemcomitans:
            from plaque to plague to pond scum
  JOURNAL   Trends Microbiol 9 (9), 429-437 (2001)
   PUBMED   11553455
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019428.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07811.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Pseudoclavibacter sp. RFBG4"
                     /db_xref="taxon:2080575"
     Protein         1..139
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /calculated_mol_wt=14083
ORIGIN      
        1 mtsanrphpr gvmrdetgsa vaewvmvsam llllmltvlq igfalhvrtt lldaagegar
       61 haglfgggle agetraadli tvaigagyaq dvtatatetd gsptiavtvr splpliglig
      121 lpdalevtgh aptetlgte
//
LOCUS       WP_258071038             485 aa            linear   BCT 02-MAR-2025
DEFINITION  amino acid permease [Pseudoclavibacter sp. RFBG4].
ACCESSION   WP_258071038
VERSION     WP_258071038.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. RFBG4
  ORGANISM  Pseudoclavibacter sp. RFBG4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Pseudoclavibacter sp. RFBG4"
                     /db_xref="taxon:2080575"
     Protein         1..485
                     /product="amino acid permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=51921
     Region          16..474
                     /region_name="AA_permease_2"
                     /note="Amino acid permease; cl45918"
                     /db_xref="CDD:459263"
ORIGIN      
        1 mtsraiqtea qhprgdetgd gglrrglksr hlqllaigga igtglflgsg ttislagpsi
       61 ifvyaivgfa lffvmralge lllsnlgykt fgdvaadlig pwagyvvawt ywlawvitvi
      121 adivaitgyv affnddipaw apaiatavgl lllnlqpvka fgetefwfai ikvvailali
      181 avgivllvtg ftsadgvtas vshlwdqggm fpfgisgfil gfqmgvfafv gielvgtasa
      241 eaedpeknlp kainsvvvri lvfyvgalvi imsvtpwnli epgvspftsm feligfpaaa
      301 ivvnlvvlts aassansgfy sstrmlygla kdgqatrrfg llnargvptq gvffttaflf
      361 aalpvlalgd nvmaaftvvt svsslnfiat wtfilisylm frkkrpelha askfkmpggr
      421 fmpwvvlaff afilvalflg edtraglivl pfwflglglm wrfviskrva raraeehsps
      481 qsena
//
LOCUS       WP_258071107             631 aa            linear   BCT 02-MAR-2025
DEFINITION  alanine racemase [Pseudoclavibacter sp. RFBG4].
ACCESSION   WP_258071107
VERSION     WP_258071107.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. RFBG4
  ORGANISM  Pseudoclavibacter sp. RFBG4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
REFERENCE   1  (residues 1 to 631)
  AUTHORS   Shaw,J.P., Petsko,G.A. and Ringe,D.
  TITLE     Determination of the structure of alanine racemase from Bacillus
            stearothermophilus at 1.9-A resolution
  JOURNAL   Biochemistry 36 (6), 1329-1342 (1997)
   PUBMED   9063881
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013345.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01168.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Pseudoclavibacter sp. RFBG4"
                     /db_xref="taxon:2080575"
     Protein         1..631
                     /product="alanine racemase"
                     /EC_number="5.1.1.1"
                     /calculated_mol_wt=66431
     Region          1..>250
                     /region_name="Alr"
                     /note="Alanine racemase [Cell wall/membrane/envelope
                     biogenesis]; COG0787"
                     /db_xref="CDD:440550"
     Region          495..618
                     /region_name="Ala_racemase_C"
                     /note="Alanine racemase, C-terminal domain; pfam00842"
                     /db_xref="CDD:459960"
ORIGIN      
        1 msgarvdvdl davranvrai adltrtplla vvkanayghg apdvaraale ggavrlgvvd
       61 lreavalrea gitapilawm hgartdwiaa ldaeielgis slaqlelvdi glgrlehser
      121 cvvvhlkldt glgrngispa ewesaftkaa elegrglirl eglfshlaga gpdadraqla
      181 sferalelaa rrgltpsvrh laatagsmsl pearfdlvrl gvslyglspf sadtdcpval
      241 rpalslsapi fedqrgfrvd lghaaglppi epgsleladd tgarwnvval dtlelrvepl
      301 egtasasgrl grsdepprll vidaarsasa dawaaaagti nyeivtrlss riprrssdas
      361 ssaephraaa gapdkeaala laprrelwvd vdllrdrmge rarelaaalr dgmgarhaar
      421 lfsvdvsada yglggalvad lalehgllpl vaanadlahv gqaarsttlv dhertrdpgs
      481 rgiygfdeps aplpvaltte lvhvkrvtag hgvsygydwv aeesttlglv plgyadaipr
      541 raagqgevvv ggqrrpivgr vamdqividl qdqeawigmp vsvfgpepgd ihlqewasws
      601 avspqafvaa lgprverrer rdqggadgcg h
//
LOCUS       WP_258071130             509 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Pseudoclavibacter sp.
            RFBG4].
ACCESSION   WP_258071130
VERSION     WP_258071130.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. RFBG4
  ORGANISM  Pseudoclavibacter sp. RFBG4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Pseudoclavibacter sp. RFBG4"
                     /db_xref="taxon:2080575"
     Protein         1..509
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=53430
     Region          49..497
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mlrktpgrla ltiattalvg vtlagcagga pveeesadar lqlvnvlapg aglspfsdda
       61 fkmtrvgafe tlvtldenge lqpglatawe qidestwrft prdgvrfqdg semtpevaaa
      121 alnsaeaatp kprvldgltl sakvdgtdvl vtgspatsll pqlltspqlp ilapaayled
      181 gtvdplgtgt gpfalteldg vtsatfdrfd dywggtakla gvdidfvtda ntrlaavrsg
      241 tadvveglaa gqlsqltedq yqvspttrtn midfntasgp fadpairaaa reaidvdaii
      301 etayggqadr adgllgpala waaplregse yttlnadrap aavvpggtki tiatfterqe
      361 lpdvlslvaq qleavgftve qvtreyqyle edalsgafdl fiqsrntvld sgdpvsffra
      421 dfscdgtynl aklcdaevda aldradatpp geernrlvll aeaqilatda vipfahpqsi
      481 fgvapgvenl ildprdrvmv tvdttvpvr
//
LOCUS       WP_258071202             234 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Pseudoclavibacter sp. RFBG4].
ACCESSION   WP_258071202
VERSION     WP_258071202.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. RFBG4
  ORGANISM  Pseudoclavibacter sp. RFBG4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
REFERENCE   1  (residues 1 to 234)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Pseudoclavibacter sp. RFBG4"
                     /db_xref="taxon:2080575"
     Protein         1..234
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=25038
     Region          14..230
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mraarsgpap ricialvddq elfvygmrml vesqpdleli gtasdgeeav elvvgerpdv
       61 vlmdirmpgl ngiaatrril eaapyadetg prprvvmltt frqdeavlqa mhngasayvt
      121 kdatpemlld tiravhagda pampvgriar gaspvlepae iaprpdvaia alsprereif
      181 llaakglrns eiaaaafvse atvkthvrnv laklelssra qivvfayehr lvtg
//
LOCUS       WP_258071204              44 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Pseudoclavibacter sp.
            RFBG4].
ACCESSION   WP_258071204
VERSION     WP_258071204.1
KEYWORDS    RefSeq.
SOURCE      Pseudoclavibacter sp. RFBG4
  ORGANISM  Pseudoclavibacter sp. RFBG4
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Pseudoclavibacter.
REFERENCE   1  (residues 1 to 44)
  AUTHORS   Yang,W. and Steitz,T.A.
  TITLE     Crystal structure of the site-specific recombinase gamma delta
            resolvase complexed with a 34 bp cleavage site
  JOURNAL   Cell 82 (2), 193-207 (1995)
   PUBMED   7628011
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014814.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02796.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..44
                     /organism="Pseudoclavibacter sp. RFBG4"
                     /db_xref="taxon:2080575"
     Protein         1..44
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0000150 - DNA strand exchange activity
                     [Evidence IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /calculated_mol_wt=4942
     Region          <13..37
                     /region_name="HTH_CRP"
                     /note="helix_turn_helix, cAMP Regulatory protein
                     C-terminus; DNA binding domain of prokaryotic regulatory
                     proteins belonging to the catabolite activator protein
                     family; cl46859"
                     /db_xref="CDD:481199"
ORIGIN      
        1 mkheyrepgk lilegghtvq eiadtfgvsr ptiyrhlaeh vera
//
LOCUS       WP_258071225             827 aa            linear   BCT 02-MAR-2025
DEFINITION  dermonecrotic toxin domain-containing protein [Vibrio jasicida].
ACCESSION   WP_258071225
VERSION     WP_258071225.1
KEYWORDS    RefSeq.
SOURCE      Vibrio jasicida
  ORGANISM  Vibrio jasicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 827)
  AUTHORS   Kitadokoro,K., Kamitani,S., Miyazawa,M., Hanajima-Ozawa,M.,
            Fukui,A., Miyake,M. and Horiguchi,Y.
  TITLE     Crystal structures reveal a thiol protease-like catalytic triad in
            the C-terminal region of Pasteurella multocida toxin
  JOURNAL   Proc Natl Acad Sci U S A 104 (12), 5139-5144 (2007)
   PUBMED   17360394
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042510.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20178.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Vibrio jasicida"
                     /db_xref="taxon:766224"
     Protein         1..827
                     /product="dermonecrotic toxin domain-containing protein"
                     /calculated_mol_wt=92894
     Region          87..>457
                     /region_name="DUF6543"
                     /note="Family of unknown function (DUF6543); pfam20178"
                     /db_xref="CDD:466329"
ORIGIN      
        1 mlptypviak gnisvtppll sesllpfdka wqldfakeya hmllslpdpi rvtservkes
       61 laqhgyhdid pdavfyhrfn gaqsshrtyn gwahyehpne sytltqavml nafgryrdsf
      121 pgtinvdtgi ytqdasgdaf dernevrlls stlwdiayde ldiqraysea ltefwsqnta
      181 rytqlqrdsy afsayqqyhh gllnqaqyql aiailspsqr revsvyrfdv ygydstdill
      241 iepkdgeggl lytpgaqqpf wayrserqlk khlfkslrvp snrkdlqshf slylrqdgat
      301 ysgvdtalka fasgnwsegy mmmkrhqvdg nvfarmteqm karlvsdgdt miksdqeaqr
      361 dyllsvaysv mtllpvvdvi apdvgiplni gvstelfgls ldkalhgdtl qerlegtkms
      421 smsaaiigat tllpalaqyg rglaeatema teslpntiva nsgfpveemd gftsmprviv
      481 hpqtkeellg vkltdsgrnt llrsdgfayy revdpssgrl vadtrivrti npdtgevqwl
      541 enaglrgggd iinndvtaes erstlpdlll pedlperpgi ggsgyadmgg grenealrdf
      601 feleqkvdpy ayltevdqlh evsvraqqei nhlpfyrhyd pevrgslvfr gdnrlpdelf
      661 hsgfnrkvep ieyiehahht rgirgvistt tdqriavnya lhnqrgyvya ielnhggksv
      721 etllrgksls eiatlnippe dimfalgpft gtdtsyatlm eseelrtael iinphsqasl
      781 evaerafekm kstlkyplsp emsfsdryan radlfwhese aqsptfh
//
LOCUS       WP_258071316             147 aa            linear   BCT 02-MAR-2025
DEFINITION  IS3 family transposase, partial [Vibrio jasicida].
ACCESSION   WP_258071316
VERSION     WP_258071316.1
KEYWORDS    RefSeq.
SOURCE      Vibrio jasicida
  ORGANISM  Vibrio jasicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024673.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13276.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Vibrio jasicida"
                     /db_xref="taxon:766224"
     Protein         1..>147
                     /product="IS3 family transposase"
     Region          <5..>147
                     /region_name="transpos_IS3"
                     /note="IS3 family transposase; NF033516"
                     /db_xref="CDD:468052"
ORIGIN      
        1 maltlkgkyp lkhllqtlql aksvfyyqaq askrtdsyes elrliksiyh ehkgrygyrr
       61 ihlelkkrgf mlnhktvqrl maqlnlkstv rikkyrsyrg esgrtapnil erdfsasqpd
      121 ekwvtdvtef kvkeqkvyls pvvdlft
//
LOCUS       WP_258071331             227 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein, partial [Vibrio jasicida].
ACCESSION   WP_258071331
VERSION     WP_258071331.1
KEYWORDS    RefSeq.
SOURCE      Vibrio jasicida
  ORGANISM  Vibrio jasicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 227)
  AUTHORS   Aravind,L., Leipe,D.D. and Koonin,E.V.
  TITLE     Toprim--a conserved catalytic domain in type IA and II
            topoisomerases, DnaG-type primases, OLD family nucleases and RecR
            proteins
  JOURNAL   Nucleic Acids Res 26 (18), 4205-4213 (1998)
   PUBMED   9722641
REFERENCE   2  (residues 1 to 227)
  AUTHORS   Szafranski,P., Smith,C.L. and Cantor,C.R.
  TITLE     Cloning and analysis of the dnaG gene encoding Pseudomonas putida
            DNA primase
  JOURNAL   Biochim Biophys Acta 1352 (3), 243-248 (1997)
   PUBMED   9224947
REFERENCE   3  (residues 1 to 227)
  AUTHORS   Bergerat,A., de Massy,B., Gadelle,D., Varoutas,P.C., Nicolas,A. and
            Forterre,P.
  TITLE     An atypical topoisomerase II from Archaea with implications for
            meiotic recombination
  JOURNAL   Nature 386 (6623), 414-417 (1997)
   PUBMED   9121560
REFERENCE   4  (residues 1 to 227)
  AUTHORS   Versalovic,J. and Lupski,J.R.
  TITLE     The Haemophilus influenzae dnaG sequence and conserved bacterial
            primase motifs
  JOURNAL   Gene 136 (1-2), 281-286 (1993)
   PUBMED   8294018
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013878.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01751.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Vibrio jasicida"
                     /db_xref="taxon:766224"
     Protein         1..>227
                     /product="toprim domain-containing protein"
     Region          1..>226
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 mivyiaekps lakaifeglg gnpqtqrgdg fyqhkehvvt ycvghllety dpddydekya
       61 kwtfddlpis tvypptlkpi pdtksqlqtv lnfikkadti vhagdpddeg qllvdevlny
      121 agntkpvqrl lvadlnlapv qkalanmesn ekyvplgmsa larsisdksf gynltrgctl
      181 kgrekgfqgv lnvgrvksav mglvnertla nqnhqksfyy dvyaqfe
//
LOCUS       WP_258071344             167 aa            linear   BCT 02-MAR-2025
DEFINITION  ankyrin repeat domain-containing protein [Vibrio jasicida].
ACCESSION   WP_258071344
VERSION     WP_258071344.1
KEYWORDS    RefSeq.
SOURCE      Vibrio jasicida
  ORGANISM  Vibrio jasicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025021.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13637.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Vibrio jasicida"
                     /db_xref="taxon:766224"
     Protein         1..167
                     /product="ankyrin repeat domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=18994
     Region          <82..>134
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          105..133
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
ORIGIN      
        1 mdinttirtt iftlsfitts falflkhslt eermmlcalg ndipvfdsed clfyfetfgv
       61 sqdllslvey qygissilsg drhsrfrman tliahgfdvn wlnesnsppl hsaiihddfe
      121 afkwlmqqga nkdlyclkvg knatefldwi ytenptanrg amyallh
//
LOCUS       WP_258071393             157 aa            linear   BCT 02-MAR-2025
DEFINITION  EF-Tu/IF-2/RF-3 family GTPase, partial [Vibrio jasicida].
ACCESSION   WP_258071393
VERSION     WP_258071393.1
KEYWORDS    RefSeq.
SOURCE      Vibrio jasicida
  ORGANISM  Vibrio jasicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Nissen,P., Kjeldgaard,M., Thirup,S., Polekhina,G., Reshetnikova,L.,
            Clark,B.F. and Nyborg,J.
  TITLE     Crystal structure of the ternary complex of Phe-tRNAPhe, EF-Tu, and
            a GTP analog
  JOURNAL   Science 270 (5241), 1464-1472 (1995)
   PUBMED   7491491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03144.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Vibrio jasicida"
                     /db_xref="taxon:766224"
     Protein         <1..>157
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          <1..157
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 galngeeqwe akivelaeal dsyipepera vdmpflmpie dvfsiqgrgt vvtgriergi
       61 lnvgdevaiv gikdtttttc tgvemfrkll degragenvg allrgtkrde vergqvlakp
      121 gsitphtkfe sevyvlskde ggrhtpffkg yrpqfyf
//
LOCUS       WP_258071449             388 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5694 domain-containing protein [Xanthomonas arboricola].
ACCESSION   WP_258071449
VERSION     WP_258071449.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039197.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18950.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..388
                     /product="DUF5694 domain-containing protein"
                     /calculated_mol_wt=41933
     Region          220..383
                     /region_name="DUF5694"
                     /note="Family of unknown function (DUF5694); pfam18950"
                     /db_xref="CDD:465929"
ORIGIN      
        1 mqpslpriah naraaarfld agsasarrlq rpahrwlwla livpciaqaq vdlsqldaem
       61 aaprtkvlvl gsvhlsqlpk gsdigaarlq plmdrlaaya ptlittedls getcdlmrrh
      121 pavylpedtt tycpdtseaa ratgldvpta lgqvraalrs lpsaptpaqr rhlaalflas
      181 geppsalvqw lqlapaeqrs gdgldaalva rlrsmeqrpn esyqiaarla arlglqrvhp
      241 addhtgdnvd ladpaaygka iqaawdkaap raramrered qlasqgklle lyrainlpas
      301 qqlaiavdfr aalsegspqr ygyryvsgwe irnlrmvsnv rasfadqpga rvlavvgamh
      361 kpwfdnwlgq lqgvdivdaa qvlgtdgk
//
LOCUS       WP_258071531             234 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Xanthomonas
            arboricola].
ACCESSION   WP_258071531
VERSION     WP_258071531.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 234)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         <1..>234
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..234
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation (C) domain of non-ribosomal
                     peptide synthetases(NRPSs) and similar domains including
                     the C-domain of SgcC5, a free-standing NRPS with both
                     ester- and amide- bond forming activity; cd19531"
                     /db_xref="CDD:380454"
ORIGIN      
        1 wqrqidhwkq tlsgapslle lptdrprppv qsyrgaslpl rlepelvqal rswssrhgat
       61 lfmaltagwa allsrlggqe evvigtpvan rpraelegla gffvntlalr vpvdgmadaa
      121 tllmqvkaqa ldafahqqlp fdqvvehvrp erslghspvf qtmlalnntp garelslpgv
      181 rlqpqpqprt ttqfdlslal nehagaltge leyatdlfda atiqrwagyl qrll
//
LOCUS       WP_258071679             421 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Clavibacter michiganensis].
ACCESSION   WP_258071679
VERSION     WP_258071679.1
KEYWORDS    RefSeq.
SOURCE      Clavibacter michiganensis
  ORGANISM  Clavibacter michiganensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Clavibacter.
REFERENCE   1  (residues 1 to 421)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Clavibacter michiganensis"
                     /db_xref="taxon:28447"
     Protein         1..421
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=42826
     Region          23..402
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mssavdparp ghgderahag dvdpvdlave liridstnpd lvaggageaa vaahaaawlr
       61 argfrvrvle gtpgrptvla targtgggrt illdghldtv ppgdpvrggt apvvedrrll
      121 grgafdmkag laammvaadr arrigtrgdv vlalvadeef asigteealr alaadgtvvd
      181 gavisepsqs eaivahrgfg wyevrlrgra ahgsmpeqgv daiahaglvl reldalagrl
      241 adgprhpllg tgavrvsrih ggsdaatvad acvltverrf lpgqstaeve aelraalsav
      301 aartpgmaae lvvlvaraaf eadiegplar avldsgarvt gapvphrgep fwtdaglvqe
      361 agipcillgv tgggahadee waevdsvrrl advlegaild fcgsvgdaea eaeaappvaa
      421 g
//
LOCUS       WP_258071709             173 aa            linear   BCT 02-MAR-2025
DEFINITION  MarR family transcriptional regulator [Clavibacter michiganensis].
ACCESSION   WP_258071709
VERSION     WP_258071709.1
KEYWORDS    RefSeq.
SOURCE      Clavibacter michiganensis
  ORGANISM  Clavibacter michiganensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Clavibacter.
REFERENCE   1  (residues 1 to 173)
  AUTHORS   Alekshun,M.N., Levy,S.B., Mealy,T.R., Seaton,B.A. and Head,J.F.
  TITLE     The crystal structure of MarR, a regulator of multiple antibiotic
            resistance, at 2.3 A resolution
  JOURNAL   Nat Struct Biol 8 (8), 710-714 (2001)
   PUBMED   11473263
REFERENCE   2  (residues 1 to 173)
  AUTHORS   Sulavik,M.C., Dazer,M. and Miller,P.F.
  TITLE     The Salmonella typhimurium mar locus: molecular and genetic
            analyses and assessment of its role in virulence
  JOURNAL   J Bacteriol 179 (6), 1857-1866 (1997)
   PUBMED   9068629
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013231.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01047.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Clavibacter michiganensis"
                     /db_xref="taxon:28447"
     Protein         1..173
                     /product="MarR family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=17916
     Region          32..162
                     /region_name="MarR"
                     /note="DNA-binding transcriptional regulator, MarR family
                     [Transcription]; COG1846"
                     /db_xref="CDD:441451"
     Region          57..>108
                     /region_name="HTH_ARSR"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; cl46857"
                     /db_xref="CDD:481197"
ORIGIN      
        1 msrtesrpgp gasdalpgpg agvpaaagda geigralrdv lglaagferr lgtvlavnpt
       61 dmkamehliq agslsptela grlgittaaa tlvvdrlvev ghvdrrphph drrrvvvvpr
      121 pasvgramde lmpmiggvar aaealsprer atvlrflgqv revyreasdg pva
//
LOCUS       WP_258071729             236 aa            linear   BCT 02-MAR-2025
DEFINITION  TrmH family RNA methyltransferase, partial [Clavibacter
            michiganensis].
ACCESSION   WP_258071729
VERSION     WP_258071729.1
KEYWORDS    RefSeq.
SOURCE      Clavibacter michiganensis
  ORGANISM  Clavibacter michiganensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Clavibacter.
REFERENCE   1  (residues 1 to 236)
  AUTHORS   Persson,B.C., Jager,G. and Gustafsson,C.
  TITLE     The spoU gene of Escherichia coli, the fourth gene of the spoT
            operon, is essential for tRNA (Gm18) 2'-O-methyltransferase
            activity
  JOURNAL   Nucleic Acids Res 25 (20), 4093-4097 (1997)
   PUBMED   9321663
REFERENCE   2  (residues 1 to 236)
  AUTHORS   Koonin,E.V. and Rudd,K.E.
  TITLE     SpoU protein of Escherichia coli belongs to a new family of
            putative rRNA methylases
  JOURNAL   Nucleic Acids Res 21 (23), 5519 (1993)
   PUBMED   8265370
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012797.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00588.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Clavibacter michiganensis"
                     /db_xref="taxon:28447"
     Protein         1..>236
                     /product="TrmH family RNA methyltransferase"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006396 - RNA processing [Evidence IEA]"
     Region          104..236
                     /region_name="SPOUT_MTase"
                     /note="SPOUT superfamily of SAM-dependent RNA
                     methyltransferases; cl38912"
                     /db_xref="CDD:476814"
     Site            order(177..179,199..202,218..220,229,231,234)
                     /site_type="other"
                     /note="SAM binding site [chemical binding]"
                     /db_xref="CDD:349952"
ORIGIN      
        1 mpererepgv gaasgvaehi agehgaagad gavgersaae ptptvelsth gvgpwpggpe
       61 awpdephldr ellergdtrn vidryrywrm daivadlder rhpfhvaien wqhdmnigsi
      121 vrsanafaad tvhivgrrrw nkrgamvtdr yqhvvhhati adlvgwaage glpviaidnv
      181 dgsvlletta lpercvlvfg qegpglsdea iqaadmtvai sqfgstrsin asaaaa
//
LOCUS       WP_258071751             201 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Clavibacter
            michiganensis].
ACCESSION   WP_258071751
VERSION     WP_258071751.1
KEYWORDS    RefSeq.
SOURCE      Clavibacter michiganensis
  ORGANISM  Clavibacter michiganensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Clavibacter.
REFERENCE   1  (residues 1 to 201)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 201)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Clavibacter michiganensis"
                     /db_xref="taxon:28447"
     Protein         1..201
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=21138
     Region          9..175
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(14,39,67,154,157)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(14,154,157)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(14,39,67)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
ORIGIN      
        1 maprtrttvl lgdsltadgr wdaivpdgda rivdrgrpgq ttddvlallp evvaedpstv
       61 vlscgthdlg aarrgpeqtv raletiladl rrdlpaarlv ivsvpprgre haeririvnv
      121 hlrqyapavr aehvdlwpal gfgdgeldpt lsddrlhltd dgaaavravl apvlaprdgg
      181 adddadvapd rsgasedpag a
//
LOCUS       WP_258071774             166 aa            linear   BCT 02-MAR-2025
DEFINITION  catalase-related domain-containing protein [Clavibacter
            michiganensis].
ACCESSION   WP_258071774
VERSION     WP_258071774.1
KEYWORDS    RefSeq.
SOURCE      Clavibacter michiganensis
  ORGANISM  Clavibacter michiganensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Clavibacter.
REFERENCE   1  (residues 1 to 166)
  AUTHORS   Guy,B., Krell,T., Sanchez,V., Kennel,A., Manin,C. and Sodoyer,R.
  TITLE     Do Th1 or Th2 sequence motifs exist in proteins? Identification of
            amphipatic immunomodulatory domains in Helicobacter pylori catalase
  JOURNAL   Immunol Lett 96 (2), 261-275 (2005)
   PUBMED   15585332
REFERENCE   2  (residues 1 to 166)
  AUTHORS   Bai,J. and Cederbaum,A.I.
  TITLE     Mitochondrial catalase and oxidative injury
  JOURNAL   Biol Signals Recept 10 (3-4), 189-199 (2001)
   PUBMED   11351128
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018351.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06628.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Clavibacter michiganensis"
                     /db_xref="taxon:28447"
     Protein         1..166
                     /product="catalase-related domain-containing protein"
                     /calculated_mol_wt=18309
     Region          <9..109
                     /region_name="catalase_like"
                     /note="Catalase-like heme-binding proteins and protein
                     domains; cl09506"
                     /db_xref="CDD:471888"
ORIGIN      
        1 mshpasptgd phvnyepsit gglregeypt hddqgpeitg rltrkriplt adylqagqry
       61 plmedwerdd lvtnltdlis qaarpvqerm lwhfhlvedd fghrvgeglg imldevkdlp
      121 plqsqtlsee elarlanlgh ngprdvtglv mthcvpdara vmvgaa
//
LOCUS       WP_258071784             349 aa            linear   BCT 02-MAR-2025
DEFINITION  ThiF family adenylyltransferase [Clavibacter michiganensis].
ACCESSION   WP_258071784
VERSION     WP_258071784.1
KEYWORDS    RefSeq.
SOURCE      Clavibacter michiganensis
  ORGANISM  Clavibacter michiganensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Clavibacter.
REFERENCE   1  (residues 1 to 349)
  AUTHORS   Lee,I. and Schindelin,H.
  TITLE     Structural insights into E1-catalyzed ubiquitin activation and
            transfer to conjugating enzymes
  JOURNAL   Cell 134 (2), 268-278 (2008)
   PUBMED   18662542
REFERENCE   2  (residues 1 to 349)
  AUTHORS   Lois,L.M. and Lima,C.D.
  TITLE     Structures of the SUMO E1 provide mechanistic insights into SUMO
            activation and E2 recruitment to E1
  JOURNAL   EMBO J 24 (3), 439-451 (2005)
   PUBMED   15660128
REFERENCE   3  (residues 1 to 349)
  AUTHORS   Lake,M.W., Wuebbens,M.M., Rajagopalan,K.V. and Schindelin,H.
  TITLE     Mechanism of ubiquitin activation revealed by the structure of a
            bacterial MoeB-MoaD complex
  JOURNAL   Nature 414 (6861), 325-329 (2001)
   PUBMED   11713534
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013094.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00899.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Clavibacter michiganensis"
                     /db_xref="taxon:28447"
     Protein         1..349
                     /product="ThiF family adenylyltransferase"
                     /GO_function="GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /calculated_mol_wt=36095
     Region          1..342
                     /region_name="PRK07878"
                     /note="molybdopterin biosynthesis-like protein MoeZ;
                     Validated"
                     /db_xref="CDD:181156"
ORIGIN      
        1 mggqsridra rvlvigaggl gspvlqylaa agigtlgivd ddavdlsnlq rqtihgtpdi
       61 grpktlsaad svhrtdpgie vvehaerltv dnairilsgy dvvvdatdnf atrylisdaa
      121 alvgipcvwg svyrfdaqvt vfwdaapdgr gidyrdvfpe ppadgavlsc eeagvfgavc
      181 gtvgslmate viklvtgagq pllgrvvvld alagtsrtig vkrakgrqrv taladydlfc
      241 gvgaatdgte ldaeeveril asdepvvlld vrepderlvd sipghvavpv rivtvdpgav
      301 pggvadrvvv ycasgvrsra aaaalreagr davslrggia awrsvagra
//
LOCUS       WP_258071868             351 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Clavibacter michiganensis].
ACCESSION   WP_258071868
VERSION     WP_258071868.1
KEYWORDS    RefSeq.
SOURCE      Clavibacter michiganensis
  ORGANISM  Clavibacter michiganensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Clavibacter.
REFERENCE   1  (residues 1 to 351)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 351)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Clavibacter michiganensis"
                     /db_xref="taxon:28447"
     Protein         1..351
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=37347
     Region          10..348
                     /region_name="MalY"
                     /note="Bifunctional PLP-dependent enzyme with
                     beta-cystathionase and maltose regulon repressor
                     activities [Amino acid transport and metabolism, General
                     function prediction only]; COG1168"
                     /db_xref="CDD:440782"
ORIGIN      
        1 mvkvttapid eirgqrtsik wtrfpadvlp lfvaemdyav aepvvdelvr rirasdvgyl
       61 dgpgplapaf arfarerwgw ivdesrvria tdvsvgivet lrlavprggr vvvtppvypp
      121 ffelveeaga rveevpllvs dgrasldlag lerafasgvd afllcnphnp mglvhdertl
      181 aavarlaarh dvlvvsdevh apltlpgaaf tpfaplaeal gassvcvtsa skgwnlagak
      241 cslviagdpr thdlldglve evacrtsilg lhanvvafsc tdwlddaiar ivandlllas
      301 llaehlpgvv hhrpaagyla wldlrplglg adptavildr artaihrgvp a
//
LOCUS       WP_258072085             650 aa            linear   BCT 02-MAR-2025
DEFINITION  SpoIIE family protein phosphatase [Xanthomonas arboricola].
ACCESSION   WP_258072085
VERSION     WP_258072085.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 650)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..650
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=70459
     Region          48..192
                     /region_name="PDC1_MCP_like"
                     /note="first PDC (PhoQ/DcuS/CitA) domain of
                     methyl-accepting chemotaxis proteins and similar domains;
                     cd12913"
                     /db_xref="CDD:350338"
     Region          195..629
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
ORIGIN      
        1 mrvllaatav lvvllavlgt vfylgarael veaarievdg lteqtalsla amldsvqvsg
       61 rtlaasssav glqpfnlral llatlsgdpd igaarliiep rtqkardsgf vwyvhrdgtr
      121 vleksvqdlg ddyrampwyl rtlrdgraww sepslstngg nalytsynlp lrrpgdavda
      181 apvgmvsvdl plqhlreiid qlprdisiqp mllspegmlv fspdpalnlh rtldsyvahs
      241 rpdllplqra vaagqpisfa htapdgerfl thsaavgrsg wtfvlsaseg yvlsglnrla
      301 vwvavagllg avawwwlmgr itrsltrpie eltdtaehfr rgefdyplqh igrrdevgvm
      361 arafdsarda irdhiaqige mtaarermhs elqiareiqq amlpsgrtfd rasshletca
      421 wlepakavgg dfyhfvetep gllwfvvgdv sdkgvpaalf maravsvlei aarrhtrpds
      481 iliaastrla enndtcmfat vlcgvinvvs gdywlasagh eppvlididg sarplpldtg
      541 aplgiepqva ypvlqgrmsa gqtllgytdg vteamdergt syglerllga lrprrsaaaq
      601 ckavianiah ftgqadpydd itllairlrq ehagrvadag rdtpgkattr
//
LOCUS       WP_258071632             201 aa            linear   BCT 02-MAR-2025
DEFINITION  acetolactate decarboxylase [Rathayibacter sp. AY1D3].
ACCESSION   WP_258071632
VERSION     WP_258071632.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1D3
  ORGANISM  Rathayibacter sp. AY1D3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 201)
  AUTHORS   Monnet,C., Aymes,F. and Corrieu,G.
  TITLE     Diacetyl and alpha-acetolactate overproduction by Lactococcus
            lactis subsp. lactis biovar diacetylactis mutants that are
            deficient in alpha-acetolactate decarboxylase and have a low
            lactate dehydrogenase activity
  JOURNAL   Appl Environ Microbiol 66 (12), 5518-5520 (2000)
   PUBMED   11097941
REFERENCE   2  (residues 1 to 201)
  AUTHORS   Goupil-Feuillerat,N., Corthier,G., Godon,J.J., Ehrlich,S.D. and
            Renault,P.
  TITLE     Transcriptional and translational regulation of alpha-acetolactate
            decarboxylase of Lactococcus lactis subsp. lactis
  JOURNAL   J Bacteriol 182 (19), 5399-5408 (2000)
   PUBMED   10986242
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015277.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03306.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Rathayibacter sp. AY1D3"
                     /db_xref="taxon:2080544"
     Protein         1..201
                     /product="acetolactate decarboxylase"
                     /EC_number="4.1.1.5"
                     /GO_function="GO:0047605 - acetolactate decarboxylase
                     activity [Evidence IEA]"
                     /GO_process="GO:0045151 - acetoin biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=21132
     Region          <86..196
                     /region_name="AldB-like"
                     /note="proteins similar to alpha-acetolactate
                     dehydrogenase; cl38904"
                     /db_xref="CDD:365780"
ORIGIN      
        1 mlrrrsrrsa psaagddrde kgqeqggrdg pgqvlvhgpq astdhrpcaa tapdhaarrt
       61 grgalararp grlrrrppar aaetptlrrp iaqaepyrrl adamrdqhev rltgvegtll
      121 glvgpqpfqg isvaglhthv vdttggiggh vlaasgvagl leieqyggit llllesddhp
      181 radldavada giravetdhp p
//
LOCUS       WP_258072148             284 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor plug domain-containing protein [Xanthomonas
            arboricola].
ACCESSION   WP_258072148
VERSION     WP_258072148.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 284)
  AUTHORS   Oke,M., Sarra,R., Ghirlando,R., Farnaud,S., Gorringe,A.R.,
            Evans,R.W. and Buchanan,S.K.
  TITLE     The plug domain of a neisserial TonB-dependent transporter retains
            structural integrity in the absence of its transmembrane
            beta-barrel
  JOURNAL   FEBS Lett 564 (3), 294-300 (2004)
   PUBMED   15111112
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07715.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..284
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /calculated_mol_wt=30030
     Region          41..>283
                     /region_name="TonB-Xanth-Caul"
                     /note="TonB-dependent receptor; TIGR01782"
                     /db_xref="CDD:273804"
ORIGIN      
        1 msaslgayaa epalagggtt epvpieavpa tpagnaapvq ldtvqvsgqh lsirqaigak
       61 reaaavsdgv aaddigsipd fglgealqrv pgvsmvvnng rgeaqfmslr gfnpdynnvl
      121 idgvalpste tsrrvqsldv ipaslaqqvd iyktfnadmd snaiggiasl htrsafdhdg
      181 rfatvranla dwenrrqlqg stpsgqvqgt fsdtfgpdnh fgvvlsadyf rrdssslnta
      241 idsysyyang vrqnltpgld tdgmaivpdr frpltydnvr qrrq
//
LOCUS       WP_258072217             326 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase fold domain-containing protein [Rathayibacter
            sp. AY1G1].
ACCESSION   WP_258072217
VERSION     WP_258072217.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1G1
  ORGANISM  Rathayibacter sp. AY1G1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 326)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019474.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07859.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Rathayibacter sp. AY1G1"
                     /db_xref="taxon:2080564"
     Protein         1..326
                     /product="alpha/beta hydrolase fold domain-containing
                     protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=34518
     Region          120..303
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 maaesvaaes aaaqsvtaqp lrtgvrdara mplvvpdalv plalrlaran rtfvsaegar
       61 rrireralrp asygppprlr pgvrvdveqv gswpvytirp rvirggvvyv hgggwvneia
      121 pqhwwlaari adeasvavtl piyplvpfgt aleardgvra lvlrslerhg atclagdsag
      181 gqialstala lrdegvvlpr ttlvspaldl swsnphipev qpadpwlgtp ggrvlaeswr
      241 gsldlldpvv splfgdlagf gpltvftgtr dvlnpdahvl aeraaaaavp felheavgqv
      301 hvyplvptra greaqhdlve glraav
//
LOCUS       WP_258072298             269 aa            linear   BCT 02-MAR-2025
DEFINITION  MASE1 domain-containing protein [Xanthomonas arboricola].
ACCESSION   WP_258072298
VERSION     WP_258072298.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 269)
  AUTHORS   Pfiffer,V., Sarenko,O., Possling,A. and Hengge,R.
  TITLE     Genetic dissection of Escherichia coli's master diguanylate cyclase
            DgcE: Role of the N-terminal MASE1 domain and direct signal input
            from a GTPase partner system
  JOURNAL   PLoS Genet 15 (4), e1008059 (2019)
   PUBMED   31022167
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 269)
  AUTHORS   Lacey,M., Agasing,A., Lowry,R. and Green,J.
  TITLE     Identification of the YfgF MASE1 domain as a modulator of bacterial
            responses to aspartate
  JOURNAL   Open Biol 3 (6), 130046 (2013)
   PUBMED   23740576
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 269)
  AUTHORS   Nikolskaya,A.N., Mulkidjanian,A.Y., Beech,I.B. and Galperin,M.Y.
  TITLE     MASE1 and MASE2: two novel integral membrane sensory domains
  JOURNAL   J Mol Microbiol Biotechnol 5 (1), 11-16 (2003)
   PUBMED   12673057
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05231.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..269
                     /product="MASE1 domain-containing protein"
                     /calculated_mol_wt=29978
     Region          17..>246
                     /region_name="UhpB"
                     /note="Signal transduction histidine kinase UhpB,
                     glucose-6-phosphate specific [Signal transduction
                     mechanisms]; COG3851"
                     /db_xref="CDD:443060"
ORIGIN      
        1 mavakelvrg mlisvcyclv flmlwrfsld qwylpvglrv vallyrpyre wpfllagdaa
       61 amlflriplg qlqgfsplws ylspllhapl iacaigllry rapyivkreq wlvpaalala
      121 lwnalcslll ngllggppiy pvidlllryg sgsylgvltl llpvmlwanw nespvrssfp
      181 rdvgvavvvv lsffftlsvl ndpsirnvlm vamlvpmvvl tfrhgwrgna lgallasfal
      241 efsmpnrllk ylsarrlles ehpplpcva
//
LOCUS       WP_258072349             649 aa            linear   BCT 02-MAR-2025
DEFINITION  SpoIIE family protein phosphatase [Xanthomonas arboricola].
ACCESSION   WP_258072349
VERSION     WP_258072349.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 649)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..649
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=70645
     Region          43..192
                     /region_name="PDC1_MCP_like"
                     /note="first PDC (PhoQ/DcuS/CitA) domain of
                     methyl-accepting chemotaxis proteins and similar domains;
                     cd12913"
                     /db_xref="CDD:350338"
     Region          195..629
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
ORIGIN      
        1 mrvllaatav lvvllallgt vfylgarael veaartevdg lteqtarsla amldsvqvsg
       61 rtlaasssav glqpfnlral llatlsgdpd igaarliiep rtqkardtgf vwyvhrdgtr
      121 vleksvqdlg ydyrampwyl rtqregraww sepylntngg nalytsynlp lrrpgdavda
      181 apvgmvsvdl plqhlreiid qlprdigiqp mllspegmlv fspdpaldlr ytleryvahs
      241 rpdllplqra vaagqpisfa htapdgerfl thsaavgrsg wtfvlsaseg yvlaglnwla
      301 awvalaallg avvwwwlmgr itrkltrpie eltdtaehfr rgefayplqh ierrdevgvm
      361 arafdsarda irdhiaqige mtaarermhs elqiareiqq amlpsgrtfd rasshletca
      421 wlepakavgg dfyhfvetep gllwfvvgdv sdkgvpaalf maravsvlei aarrhtrpds
      481 iliaastrla enndtcmfat vlcgvinvvs gdywlasagh eppvlididg sarplpldtg
      541 aplgiepqva ypvlqgrmsa gqtllgytdg vteamdeqga syglerllga lrprrsaaaq
      601 ckavianiah ftgqadpydd itllairlrq ehagrvadag rdapgkatt
//
LOCUS       WP_258072029             911 aa            linear   BCT 02-MAR-2025
DEFINITION  rhamnan synthesis F family protein [Xanthomonas arboricola].
ACCESSION   WP_258072029
VERSION     WP_258072029.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 911)
  AUTHORS   Shibata,Y., Yamashita,Y., Ozaki,K., Nakano,Y. and Koga,T.
  TITLE     Expression and characterization of streptococcal rgp genes required
            for rhamnan synthesis in Escherichia coli
  JOURNAL   Infect Immun 70 (6), 2891-2898 (2002)
   PUBMED   12010977
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016903.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05045.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..911
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..911
                     /product="rhamnan synthesis F family protein"
                     /calculated_mol_wt=100735
     Region          <36..275
                     /region_name="RgpF"
                     /note="Rhamnan synthesis protein F; pfam05045"
                     /db_xref="CDD:428278"
     Region          315..772
                     /region_name="COG5610"
                     /note="Predicted sugar hydrolase, contains GT1 and HAD
                     domains [General function prediction only]"
                     /db_xref="CDD:444341"
ORIGIN      
        1 mralkliral girglvgrlq lagrarpagh rlpdqhpflp paplsqlqlk igvmlhvfyp
       61 dlidefaqsl qhmpvgydll vsvmddtaat larerlstlp qigkleirvv pnrgrdiapl
      121 lvtfreqila ldvvghlhtk kslytgseqg ewrrylvssl mgsperiawq lgmfqaeprl
      181 gmlypesyer vllwahtwls nfsvcrtlaq rlgfdispse yidfpagsmf wakvdalrpl
      241 yalnlelkdf peehgqidgt lhhaverlfv avvrnqqyri gilpqdgtls lsdeggrnwq
      301 asfetpiatr ltlsslqarl vsldifdtlv vrpflfpaga raflahliar qfgignflel
      361 relaeskarh qrgadvdlss iyaalaglpd akglptsalq alevalearl lrprqgviaa
      421 atqlkqrgir lvalsdmyld sallqqvlpp evsalpaawy vscetgwrkd adnvwrelpa
      481 lekidasqwl hvgdnehadv qrpqmhqllt pvhvlrpsal levipalrpl rpssgaaarw
      541 qdqlwlglla nqfadladrh petlmplpvl spaclgyvvi gplifdylaw lirtakqcnv
      601 etilflsreg hlleqgfqlv rqtspslqql hgkyllasrr gtgtpslhap ddlallldst
      661 ytgtlgdliq arlgdaaahi verrlgrsvm qrdvylpemh aelveliapa itellalaet
      721 ertaylhywr atagdgaamv adigysgtiq anlarltgqp lggvyfalng ratkipvhnw
      781 aaaryfdgra dsdpeqstil rhdllletll tapspqfscf taapdvptav yanpelsaaq
      841 watiaqvheg alafiadvcr vaqdqsylld fdrtsvqipl qcigsgrwqa pwladlqldd
      901 rftgrglvra g
//
LOCUS       WP_258072391             985 aa            linear   BCT 02-MAR-2025
DEFINITION  immunoglobulin-like domain-containing protein [Rathayibacter sp.
            AY1E9].
ACCESSION   WP_258072391
VERSION     WP_258072391.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1E9
  ORGANISM  Rathayibacter sp. AY1E9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042837.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20578.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Rathayibacter sp. AY1E9"
                     /db_xref="taxon:2080556"
     Protein         1..985
                     /product="immunoglobulin-like domain-containing protein"
                     /calculated_mol_wt=101258
     Region          <186..252
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          279..348
                     /region_name="aBig_2"
                     /note="Atrophied bacterial Ig domain; pfam20578"
                     /db_xref="CDD:466727"
     Region          361..451
                     /region_name="aBig_2"
                     /note="Atrophied bacterial Ig domain; pfam20578"
                     /db_xref="CDD:466727"
     Region          488..803
                     /region_name="GH43_Bt3655-like"
                     /note="Glycosyl hydrolase family 43 protein such as
                     Bacteroides thetaiotaomicron VPI-5482 arabinofuranosidase
                     Bt3655; cd08983"
                     /db_xref="CDD:350097"
ORIGIN      
        1 mrslflsala ctsvaltgal vpvsaqavdv paptahydms hagsalldis gngrnatltg
       61 ltdasfanag gdqvarfknd gyaslpqglv tgadnafave ytvktqttan qfgwvigdgv
      121 gpwnttqlgn hvfvnprnpd gspsgqvlag irvkeptsng etrmpfggtl npgfttltlv
      181 gtgtgsstvl tlyrdgtqis tanttksmas ivptgstlgy lgrslysgda lvtadvtdvk
      241 fwdtslsaeq vassmptaaa kasatsallr sdiqpvllag npslaqvssn ltlpasssgv
      301 pltwtssnsa vvsttgvvsr siaqntpvtl tattaqgati afevvvlaps inddldalkl
      361 atrttenlpl avkgarnstd itwtssdpal vtptntsyaa pavgaadpyr gggvvtrpay
      421 gsgdrtvtlt atatlngvte traftltvae lgrtapdagy asayfksdgd ekiyqaatsg
      481 ndfftfspvn ggkavitstt dtkglrdpfi lrshngdkyy mvatdlcisc gtgwgdaqsk
      541 gslkievwes tdlvqwtrtn gadtgitvnq paagmtwape aywddalqsy vvffssrlys
      601 datktnsdkl yarvfsvitr dfrtftappa twqdtgyari dstitkigdy yyrftkneeg
      661 gaagtleagk diflekskvl tagttssnws adpnttwqlt dtrmtsletg qagegpeiik
      721 lnagdpndtt gtgdgyaflv dnygdggyka fltsgaaiag ssqtnrlsqs adwnvspksr
      781 aglpasprhg afvsvpqtvl tamknwtgvt avdstttlta dgrtvtatva aadrgdvvgs
      841 vtftggswts tvplsggsas vsvpagvtgv tasytgyadk lvrtsvsavv pldtlelvpa
      901 vatrcvagki vltatvkntd taaadvtits aygsksftav apgssasaaf ttrlasmpag
      961 tvtvtgsatg qpaftatvpv aaarc
//
LOCUS       WP_258072408            1278 aa            linear   BCT 02-MAR-2025
DEFINITION  YadA-like family protein [Xanthomonas arboricola].
ACCESSION   WP_258072408
VERSION     WP_258072408.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 1278)
  AUTHORS   Sandt,C.H. and Hill,C.W.
  TITLE     Nonimmune binding of human immunoglobulin A (IgA) and IgG Fc by
            distinct sequence segments of the EibF cell surface protein of
            Escherichia coli
  JOURNAL   Infect Immun 69 (12), 7293-7303 (2001)
   PUBMED   11705900
REFERENCE   2  (residues 1 to 1278)
  AUTHORS   Hoiczyk,E., Roggenkamp,A., Reichenbecher,M., Lupas,A. and
            Heesemann,J.
  TITLE     Structure and sequence analysis of Yersinia YadA and Moraxella
            UspAs reveal a novel class of adhesins
  JOURNAL   EMBO J 19 (22), 5989-5999 (2000)
   PUBMED   11080146
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015831.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03895.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1278
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..1278
                     /product="YadA-like family protein"
                     /calculated_mol_wt=121859
     Region          71..229
                     /region_name="LbR_YadA-like"
                     /note="YadA-like, left-handed beta-roll; cd12820"
                     /db_xref="CDD:240612"
     Site            order(71,73,76..77,85,90..91,99,101,103..105,113,115,
                     117..119,127,162,164..166,174,176,178..180,188,190,
                     192..194,202,204,206..207,211,213..214,217..222,226)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:240612"
     Region          152..>741
                     /region_name="auto_Ata"
                     /note="trimeric autotransporter adhesin Ata; NF033481"
                     /db_xref="CDD:411124"
     Region          491..1276
                     /region_name="Hia"
                     /note="Autotransporter adhesin [Intracellular trafficking,
                     secretion, and vesicular transport, Extracellular
                     structures]; COG5295"
                     /db_xref="CDD:444098"
ORIGIN      
        1 mllalagmag vaqatttqad alahctvvqg qqrcdtdaat sdsaapatas aqalatpaad
       61 adapafadgq dalalgnasn algdgtsafg ggslalerda taighnvsaa gesatavgsv
      121 atvydydasg fvigqreqat qasgvgatav gggavagdpf ssavgsgasa tgvqsaalgy
      181 raqtfndgat aigglstasg flstaggyss rasgdtstaf gyrarsqgss siavgdtala
      241 sgvqsvvvgg isnsgsitaa tgtggialga gaqsqsdyai aigydsnifp napgntdava
      301 ighsagsfap rtvslggfal amgdggisig hdstaytens ialgaragts wfngnntaig
      361 adsqtngida vaigygarvg dfvddawnrs assavalgah syanrsntvs vgdvqagltr
      421 qitsmaagte andavnvaql dsvravadrl dstlaigktd tdevaahvdg lnalalgsas
      481 naigdganal gsgslalgrd avavgrnasa adasavavgg vasvpvfdaa gsivgaqeqa
      541 tlaqargaaa lgsgatatrs fatavgtgaa asgeqsmaag fsaraqddva tavgafstar
      601 saaasafgfg aradasmtta vgfnasslge ssvavgslav aagersvtlg gmslisstlr
      661 pagafrvggv aigagarsdg dyavalgyna nvfsndnntd avaighsaas faprtvslga
      721 lasaegaegi gigydarats srsiaigsga ntsilygdni algtnakada pdaiaigrna
      781 nvgvfvgetg saavalgvqs nalgnnslav gynaftregg rdavalgana gasgadsval
      841 gagsrsyean vvsvgngngr ggpatrrivn vgngaiagas tdainggqlf qslsnaasfl
      901 gggaaigaqg vfvaptyviq gssyrnvgea ltaldskvse ldarggtatp gaaarsvaar
      961 vatapapaad asivattada tddgllstsl aadgmagsav ssvtatasgl aasnalqgtp
     1021 taamvgsitp aatstavgta avanhvtgta iggsayahgp ndtaigsnar vnadgstavg
     1081 antqiaavat navamgegaq vsaasgtaig qgarasaqga valgqgsvad rantvsvgsv
     1141 ggerqvanva agtratdavn kgqldngvaa ansytdsryn amadsfetyq gdiedrlrrq
     1201 nrrldrqgam ssamlnmaas vggiatqnrv gagvgfqnge salsvgyqra ispratltvg
     1261 galsgddssi gvgagfgw
//
LOCUS       WP_258072441             161 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Xanthomonas arboricola].
ACCESSION   WP_258072441
VERSION     WP_258072441.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 161)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         <1..>161
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          <1..>161
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 csaadgpmpq trehillsrq vgvphivvfl nkadmvddae llelvemevr ellskydfpg
       61 ddtpiihgsa rlaldgdqse igvpailklv daldtfipep trdvdrpflm pvedvfsisg
      121 rgtvvtgrie rgiikvgdei eivgirdtqk ttvtgvemfr k
//
LOCUS       WP_258072448             423 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: acyl-CoA dehydrogenase family protein [unclassified
            Rathayibacter].
ACCESSION   WP_258072448
VERSION     WP_258072448.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 423)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 423)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014790.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02771.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..423
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=45486
     Region          39..417
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(115,145,147,171,173,400..402,404,406)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mtitaptttg adaattigaa aehwsaaprp dspdawlvra eevaavlatd alerdragaa
       61 pfaevallka aglvtllgpa ehgggaqewt talrvvrtva rgdgsigqll gyhylwawaa
      121 rlvgtpeqii aveqlategd llyggavnpr dsdltvreeg delvftgrks fstggvvsdl
      181 tvlegvlegt dthlfaivpt dqegivfgrd wdslgqrlte sgsveirgvr vpwaaaagfv
      241 dkvyrplvyn tlnvpviqqv faefylgiaq galeraaqyt rertrawpyg gddkeragde
      301 wyvlegygdl qsrlwadeal idatgaalsa alhapreelt prrrgeiavr iaaakarive
      361 dglatatrvf eltgarasas svgldlywrn lrthslhdpl pykrrevgvf alldtvpeps
      421 wyt
//
LOCUS       WP_258072457             318 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF998 domain-containing protein [unclassified
            Rathayibacter].
ACCESSION   WP_258072457
VERSION     WP_258072457.1
KEYWORDS    RefSeq.
SOURCE      unclassified Rathayibacter
  ORGANISM  unclassified Rathayibacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017959.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06197.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="unclassified Rathayibacter"
                     /db_xref="taxon:2609250"
     Protein         1..318
                     /product="DUF998 domain-containing protein"
                     /calculated_mol_wt=32875
     Region          3..212
                     /region_name="DUF998"
                     /note="Protein of unknown function (DUF998); cl21592"
                     /db_xref="CDD:473918"
     Region          <207..311
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mgtrgagvlw vvsalayvga eavaasafpg ysyarnyisd lgvpevgvfq graidsplha
       61 vmnagfllqg alylaaavtt vraarggsrg lflslavvya vgiavvglvh gssasaqngi
      121 gglhvvgaam aivggnaasi vagaaarrgr apwaletvgi vlgaagllal lmlqvdtrvp
      181 gvdllpdgvw erasvyavta wqlatglrll rrpevprqpr ppqtagsgaq vrsavhrlfq
      241 lgiripealp vvvfddnpws elvtpplsvv rqpidmlarh svelvlarmq grlpeapqhi
      301 evqadlviss scaapprr
//
LOCUS       WP_258072534             299 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4097 family beta strand repeat-containing protein [Rathayibacter
            sp. AY1C2].
ACCESSION   WP_258072534
VERSION     WP_258072534.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1C2
  ORGANISM  Rathayibacter sp. AY1C2
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024743.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13349.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Rathayibacter sp. AY1C2"
                     /db_xref="taxon:2080535"
     Protein         1..299
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /calculated_mol_wt=31159
     Region          <101..261
                     /region_name="YvlB"
                     /note="Uncharacterized conserved protein YvlB, contains
                     DUF4097 and DUF4098 domains [Function unknown]; COG3595"
                     /db_xref="CDD:442814"
ORIGIN      
        1 mslekwlvqa getkvidldv vrsvkvalvg gqidviahde ptarvevhsv dgrplkvsmd
       61 gdrleidhvq lrwdtivdvv kglgrrgdra disllvprgv dlkfdtvsad glvsglhsda
      121 rvstvggdiv vdglhgdvev ntvhgelsvr shtgrvtart vsgdvtatge ltrftvdgvs
      181 gsvfvdaegt pdriqantvs gdltirvdeg lgaryrintv sgtlqldgsv vkgtfgrgft
      241 sttgsldskw vdvaansvsg dvvvvrrsva assasvgegw gspgtgpadd rrpmdgssl
//
LOCUS       WP_258072556             289 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Rathayibacter sp.
            AY1C2].
ACCESSION   WP_258072556
VERSION     WP_258072556.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1C2
  ORGANISM  Rathayibacter sp. AY1C2
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 289)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 289)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 289)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 289)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Rathayibacter sp. AY1C2"
                     /db_xref="taxon:2080535"
     Protein         1..289
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=31066
     Region          <2..269
                     /region_name="GsiA"
                     /note="ABC-type glutathione transport system ATPase
                     component, contains duplicated ATPase domain
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1123"
                     /db_xref="CDD:440740"
ORIGIN      
        1 msrtaedqap ivvddlsvey pprgisrrwt alrgvslrve pgevlgilgg sgsgkstlar
       61 vlggdglghd ggrtrpviig gdatvaghrl rslparelkr ftvdvahlaq dagatlrpel
      121 tvseliaepi flrdrhydpk aaavrvatll dsvhlplfll drypyelssg qrqrvavars
      181 lvlgpkvlia deptsgidat vresivdlla dlrrregfaa vvvshdidvl sratdriavl
      241 vggevvaygp lldvliearh pyvrelgaaf aeyerfdasr aqrveaadq
//
LOCUS       WP_258072581             264 aa            linear   BCT 02-MAR-2025
DEFINITION  pseudouridine synthase [Xanthomonas arboricola].
ACCESSION   WP_258072581
VERSION     WP_258072581.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 264)
  AUTHORS   Wrzesinski,J., Nurse,K., Bakin,A., Lane,B.G. and Ofengand,J.
  TITLE     A dual-specificity pseudouridine synthase: an Escherichia coli
            synthase purified and cloned on the basis of its specificity for
            psi 746 in 23S RNA is also specific for psi 32 in tRNA(phe)
  JOURNAL   RNA 1 (4), 437-448 (1995)
   PUBMED   7493321
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013045.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00849.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..264
                     /product="pseudouridine synthase"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /GO_process="GO:0001522 - pseudouridine synthesis
                     [Evidence IEA]"
                     /GO_process="GO:0009451 - RNA modification [Evidence IEA]"
                     /calculated_mol_wt=28973
     Region          28..241
                     /region_name="PseudoU_synth"
                     /note="Pseudouridine synthases catalyze the isomerization
                     of specific uridines in an RNA molecule to pseudouridines
                     (5-ribosyluracil, psi); cl00130"
                     /db_xref="CDD:469624"
     Site            order(77..80,183)
                     /site_type="active"
                     /db_xref="CDD:211324"
ORIGIN      
        1 mallrgdava cgahdadnpp vstspkqlqi lyqdqvlavv dkpaglmvhd sklargeddf
       61 ladrlreqlg rpiflvhrld ratsgcllla fdreaasalg kalmagelek dyltvcrgwp
      121 aeerfivdhd ldggpgkpvk kpavthfqrl atgeleipst gfatsryall rcqpqtgrfr
      181 qirrhmkhls hhmigdtshg dgrhnrsfrm lgihrmllha erlgfphpad grrigvtapl
      241 dvefakacal fgwemaglgv mpta
//
LOCUS       WP_258072505             514 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rathayibacter sp. AY1C2].
ACCESSION   WP_258072505
VERSION     WP_258072505.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1C2
  ORGANISM  Rathayibacter sp. AY1C2
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Rathayibacter sp. AY1C2"
                     /db_xref="taxon:2080535"
     Protein         1..514
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=51612
     Region          23..470
                     /region_name="PRK14995"
                     /note="SmvA family efflux MFS transporter"
                     /db_xref="CDD:184957"
ORIGIN      
        1 msartapvct hdtagaadrv grrawvalav lmlpvllvsv dntvlnfalp siaedlgpsg
       61 tellwivday plvlagllva mgslgdrvgr rrlllvgavg faavsvvaaf aptaaaliga
      121 raalgffgam lmpstlsllr svfpdrdqrr laiaiwatgf avgsgigplv ggvllehfpw
      181 gsvfllavpv llplvvlvpi lvpesrdpqp gpvdvvsill slatmapvvy avksfaehgi
      241 davgvaalvv gvvsgalfvr rqqrqaspml dlslfrrgsf saaivvnlls vtalvgglff
      301 lsqhlqlvvg lspleaglvl vpglavmila glgvvpiarr vaprlvvpag llvsavgyil
      361 lalgsgapgg asaltvavaf aflglgigaa etvsnelila napadkagaa savsetayel
      421 gavlgtatlg tvltavyrgg vvlpegldaa qaqragetlg gavsvagelp adsaaslvas
      481 asaafdsgvg wsawlgvvlv laaaavgawr lrrs
//
LOCUS       WP_258072585              46 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Xanthomonas arboricola].
ACCESSION   WP_258072585
VERSION     WP_258072585.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 46)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..46
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..>46
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>46
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 makakfertk phvnvgtigh vdhgkttlta altkigaerf ggefka
//
LOCUS       WP_258072601             367 aa            linear   BCT 02-MAR-2025
DEFINITION  alanine racemase [Rathayibacter sp. AY1B7].
ACCESSION   WP_258072601
VERSION     WP_258072601.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1B7
  ORGANISM  Rathayibacter sp. AY1B7
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 367)
  AUTHORS   Shaw,J.P., Petsko,G.A. and Ringe,D.
  TITLE     Determination of the structure of alanine racemase from Bacillus
            stearothermophilus at 1.9-A resolution
  JOURNAL   Biochemistry 36 (6), 1329-1342 (1997)
   PUBMED   9063881
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013345.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01168.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Rathayibacter sp. AY1B7"
                     /db_xref="taxon:2080532"
     Protein         1..367
                     /product="alanine racemase"
                     /EC_number="5.1.1.1"
                     /calculated_mol_wt=37344
     Region          20..364
                     /region_name="PLPDE_III"
                     /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
                     Enzymes; cl00261"
                     /db_xref="CDD:469695"
     Site            order(53,55,96,146,179,181,239..242)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate (PLP) binding site [chemical
                     binding]"
                     /db_xref="CDD:143494"
     Site            55
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:143494"
ORIGIN      
        1 mtvdtaaads sarsavldal atpalvldea vldrdiaava aaarerglal rphakthksl
       61 eiarrqlaag avgltvatvs eaevfaaggi rdlfiayplw vdaeragrlr hvlasarvrv
      121 gvdsaesaer laaalpereg levvveidsg hhrsgvlpae agaiaaaavs agldvagvft
      181 fpghsyaagn gaaaardear alaesvasla asgvearvvs ggstpsaafa dssvltelrp
      241 gvsalgdaqq weigtmtped iavtvlativ srrgdhliad agskvlssdr gaassgfgrl
      301 pehpearipv lsehhatitg vdlpvgtrvr iapnhvcvav nladeyrvll rdgggavwpv
      361 dargrns
//
LOCUS       WP_258072604             900 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Rathayibacter sp. AY1B7].
ACCESSION   WP_258072604
VERSION     WP_258072604.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1B7
  ORGANISM  Rathayibacter sp. AY1B7
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 900)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Rathayibacter sp. AY1B7"
                     /db_xref="taxon:2080532"
     Protein         1..900
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=92887
     Region          66..324
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     Region          351..894
                     /region_name="PRK09274"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:236443"
ORIGIN      
        1 mtaphpaeri rgalgstaaa qlppagldgl dpawsrlvda pdaqgvprrw hlldtgealg
       61 tepvgtvlcv hgnptwsylw rrlaaatles arsggpawrv vavdqlemgf sertgalhtl
      121 adrvrelsnl tdvlglddvv tlghdwggvv slgwavdhpe qlratmllnt aihqsadepi
      181 paplrlalas gvlgastvgt paflettlal ghpalpsavk egyrapyrsa srrggvggfv
      241 adipvdsahp sdpelqriae gvsalttpal mlwgpldpif sdrylddlvd rlphaqvhry
      301 egaghlvaed vdyssavltw lgdlsdgeep fggdpapdvr rptapveplw ahldrnaqdd
      361 slalvemapp ggggprsvsw rllsqrvrel aaglrasgvs pgdrvsllvp pgadltally
      421 aclrigavvv vadaglglrg ltravrgawp dlvvgalpgl tvaralrwpg grvstqtlpr
      481 asasalgvdt slgqlielgr aelaadpeal geapaadava ailftsgstg pakgvvythr
      541 qlagvrdala rqygigpgtg lvagfapfal lgpalgtrsa tpdmdvtapr tltaaavaaa
      601 aarvdatvlf lspaalanvv atadaldadd hralagvrtf lsagapvsag llgeaqalmp
      661 nasartpygm tegllltdas legireaaad ddprggvcvg vpaagvrlri apldadgraa
      721 depeeiagtt geivvsaghv edhyerlwlt draarvgavp gerwhrtgdv gridsagrlw
      781 vegrmphvvv tpdgvvtpvg peqriearva svaraaivga gprgvaqlva vvelrsgarr
      841 vvlaeealaa evraavgrpv aavlvvpalp tdirhnskid raalsrwaeg vlaggrmvap
//
LOCUS       WP_258072611             434 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rathayibacter sp. AY1B7].
ACCESSION   WP_258072611
VERSION     WP_258072611.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1B7
  ORGANISM  Rathayibacter sp. AY1B7
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Rathayibacter sp. AY1B7"
                     /db_xref="taxon:2080532"
     Protein         1..434
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=43894
     Region          9..432
                     /region_name="PRK10489"
                     /note="enterobactin transporter EntS"
                     /db_xref="CDD:236700"
ORIGIN      
        1 msqtpraprr shvldvsplr espafarlwa gnvisgiggq mtivavglhi yeltgstlav
       61 alvgvvalvp tviaglyggm ladafdrrlv lllaavvawg stagiaalaw lgaetplsly
      121 vltavnavat tvivttrmtl aprllrtelv paaaalggia sgvevtvgpa lagvlvassg
      181 faitytidvv lflaaflgia glpalvpege rqrpgleslr yglgflkgap nirmsflvdi
      241 vamtfgqprv ifpaaaavll gggavtvgal taafaigali sgvfsgrltg vrrqglaigr
      301 siqvygafvv afgavllgaa lvqhdasapn aglialaava lagagasdnv ssifrqtmlq
      361 tavpdnmrgr lqgvfivavt ggprvgdlyt gllaslallw lpplagglai iailaavlrl
      421 rpgfraydal hpta
//
LOCUS       WP_258072648             386 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rathayibacter sp. AY1B7].
ACCESSION   WP_258072648
VERSION     WP_258072648.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1B7
  ORGANISM  Rathayibacter sp. AY1B7
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Rathayibacter sp. AY1B7"
                     /db_xref="taxon:2080532"
     Protein         1..386
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=37804
     Region          43..348
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(57,108..109,111..113,116,136,139..140,143,216,
                     219..220,223..225,228,257,261,310..311,315,319,335,
                     338..339,342..343,346)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mrnrlatpsl lahavliqav afllrpaavy qairldvpaw algalgasfa lvpllialpv
       61 gglvdrvgar avmavgslva vgaaavllla ggsvaglllg iallgaghlg cvvgqqtvva
      121 ggtggtrlds rfgyytfaas lgqaigpafi pvlaggsvrp dpaplflvgg ilavlllvst
      181 agirspsprg paaegaaapg stlgllrvpg laralltsat vvaavdltvv ylpalgaerg
      241 lpagvvgall tvralasmas rlllgaatar lgrtrvmvgg ilisalclvl valpaptvll
      301 fvavaalglg lgigqpitms wliertpadr hgralalrla gnrlglialp sllgilaaaa
      361 gaggvligtg aavgatllll rgvrld
//
LOCUS       WP_258072649             985 aa            linear   BCT 02-MAR-2025
DEFINITION  immunoglobulin-like domain-containing protein [Rathayibacter sp.
            AY1B7].
ACCESSION   WP_258072649
VERSION     WP_258072649.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1B7
  ORGANISM  Rathayibacter sp. AY1B7
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042837.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20578.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Rathayibacter sp. AY1B7"
                     /db_xref="taxon:2080532"
     Protein         1..985
                     /product="immunoglobulin-like domain-containing protein"
                     /calculated_mol_wt=101299
     Region          <186..252
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          279..348
                     /region_name="aBig_2"
                     /note="Atrophied bacterial Ig domain; pfam20578"
                     /db_xref="CDD:466727"
     Region          361..451
                     /region_name="aBig_2"
                     /note="Atrophied bacterial Ig domain; pfam20578"
                     /db_xref="CDD:466727"
     Region          488..803
                     /region_name="GH43_Bt3655-like"
                     /note="Glycosyl hydrolase family 43 protein such as
                     Bacteroides thetaiotaomicron VPI-5482 arabinofuranosidase
                     Bt3655; cd08983"
                     /db_xref="CDD:350097"
ORIGIN      
        1 mrslflsala ctsvaltgal vpvsaqavdv papiahydms hagsalldis gngrnatltg
       61 ltdasfanas gdqvarfknd gyaslpqglv tgadnafave ytvktqttan qfgwvigdgv
      121 gpwnttqlgn hvfvnprnpd gspsgqvlag irvkeptnng etrmpfggtl npgfttltlv
      181 gtgtgsstvl tlyrdgtqis tanttksmas ivptgstlgy lgrslysgda lvtadvtdvk
      241 fwdtsltaeq vassmptata kasatsallr sdiqpvllag npsltqvssn ltlpasssgv
      301 pltwtssnsa vvsatgvvsr siaqntpvtl tattaqgati afevvvlaps inddldalkl
      361 atrttenlpl avkgarngtd itwtssdpal vtptntsyaa pavgaadpyr gggvvtrpay
      421 gsgdrtvtlt atatlngvte traftltvae lgrtapdagy asayfksdgd ekiyqaatsg
      481 ndfftfspvn ggkavitstt dtkglrdpfi lrshngdkyy mvatdlcisc gtgwgdaqsk
      541 gslkievwes tdlvqwtrtn gadtgitvnq paagmtwape aywddalqsy vvffssrlys
      601 datktnsdkl yarvfsvitr dfrtftappa twqdtgyari dstitkigdy yyrftkneeg
      661 gaagtleagk diflekskvl tagttssnws adpnttwqlt dtrmtsletg qagegpeiik
      721 lnagdpndtt gtgdgyaflv dnygdggyka fltsgaaiag ssqtnrlsqs adwnvspksr
      781 aglpasprhg afvsvpqtvl tamknwtgvt avdstttlta dgrtvtatva aadkgdvvgs
      841 vtftggswts tvplsggsas vsvpagvtav tasytgyadk lvrtsvsaav pldtlelvpa
      901 vatrcvagki vltatvkntd taaadvtits aygsksftav apgssasaaf ttrlasmpag
      961 tvtvtgsatg qpaftatvpv aaarc
//
LOCUS       WP_258072694             388 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5694 domain-containing protein [Xanthomonas arboricola].
ACCESSION   WP_258072694
VERSION     WP_258072694.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039197.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18950.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..388
                     /product="DUF5694 domain-containing protein"
                     /calculated_mol_wt=41850
     Region          220..383
                     /region_name="DUF5694"
                     /note="Family of unknown function (DUF5694); pfam18950"
                     /db_xref="CDD:465929"
ORIGIN      
        1 mqpslpriah naraaarfld agsasarrlq rpahrwlwla liapciaqaq vdlsqldaem
       61 aaprtqvlvl gsvhlsqlpk gsdigaarlq plmdrlaaya ptiittedls getcdlmrrh
      121 pavylpedtt tycpdtseaa ratgldvpta lgqvrvalrs lpstptpaqr rhlaalflas
      181 geppsalvqw lqlapaeqrs gdgldaalva rlrsmeqrpn esyqiaarla arlglqrvhp
      241 addhtgdnvd lgdpaaygka iqaawdkaap rasamrerkd qlasqgklle lyrainlpas
      301 qqlaiavdfr aalsegspqr ygyrymsgwe irnlrmvsnv rasfadqpga rvlavvgath
      361 kpwfdnwlgq lqgvdivdaa qllgsdgp
//
LOCUS       WP_258072668             173 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Rathayibacter sp. AY1B7].
ACCESSION   WP_258072668
VERSION     WP_258072668.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1B7
  ORGANISM  Rathayibacter sp. AY1B7
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12688.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Rathayibacter sp. AY1B7"
                     /db_xref="taxon:2080532"
     Protein         1..173
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=18294
     Region          52..168
                     /region_name="TPR_5"
                     /note="Tetratrico peptide repeat; pfam12688"
                     /db_xref="CDD:403783"
ORIGIN      
        1 mtetrasdpd rpetdalalw vaaverldaq ddpdgvverm rvlaarypgh dgvaafelgg
       61 aldsagheae aaveyerala agldderrar ltiqyastlr nlgrtdeaid llagaaahpa
      121 vgsarevfla lalhsagrvd ealrialeal apglpryqrs vrayaaaltd peq
//
LOCUS       WP_258072719             258 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Rathayibacter sp.
            AY1C5].
ACCESSION   WP_258072719
VERSION     WP_258072719.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1C5
  ORGANISM  Rathayibacter sp. AY1C5
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 258)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 258)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Rathayibacter sp. AY1C5"
                     /db_xref="taxon:2080538"
     Protein         1..258
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=26898
     Region          5..249
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(9,11..12,14,33..35,80..82,136..138,151,155,181..184)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(105,138,151,155)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mdrrvvvtga ssgigaaavr lfrehgwkvv avarrrdrle alaaetgagy faadltdaaq
       61 vdalrdhlss sgpvhalvnn aggalgldsv ersdpedwrr mfeinvlsvk lvtsallpll
      121 ragirgsgts adivtvtsia ghvayegggg ynaakhaaha lvavlrlela gepirvieia
      181 pgmvhtdefs lvrfrgdrer adavyaevpd plvaedvaaa ivssvelpah vnldlvtikp
      241 vaqaaphkva kgplapra
//
LOCUS       WP_258072795             325 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase [Brevibacillus laterosporus].
ACCESSION   WP_258072795
VERSION     WP_258072795.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus laterosporus
  ORGANISM  Brevibacillus laterosporus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
REFERENCE   1  (residues 1 to 325)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 325)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Brevibacillus laterosporus"
                     /db_xref="taxon:1465"
     Protein         1..325
                     /product="phosphotransferase"
                     /calculated_mol_wt=38130
     Region          4..293
                     /region_name="CotI"
                     /note="Spore coat protein CotI/CotS, protein kinase
                     superfamily [Cell cycle control, cell division, chromosome
                     partitioning]; COG5881"
                     /db_xref="CDD:444583"
ORIGIN      
        1 mkalekafrc qiygikpqrs vfsvrtdrga wvvkgyveee kalwvthlad vlqeqgfynt
       61 vkyvansygq kvqpigerfy tvmkeingrd atytnvgdik ksatalarfh laaegfptsp
      121 flsemeirkp pllekwerrl eqfqriskri alrgpqnrfe lmvqsmakei kregqeviqv
      181 ayqmpisqqm eqahyygtla hrdvashnfl ikesgscyli dldtvapdmq ivdivqiasr
      241 mlflheydkr vyhqaiesyh kikhlsddei qiihhllryp dnplreitgi ynklpgyrik
      301 svthllqler klkrerrrff kesyf
//
LOCUS       WP_258072793             111 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Brevibacillus laterosporus].
ACCESSION   WP_258072793
VERSION     WP_258072793.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus laterosporus
  ORGANISM  Brevibacillus laterosporus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
REFERENCE   1  (residues 1 to 111)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 111)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Brevibacillus laterosporus"
                     /db_xref="taxon:1465"
     Protein         1..111
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=13126
ORIGIN      
        1 mfvlmkndit kidiekeimn snieynviah dkelleskei feehleaqkl hlerylvkke
       61 geyigygmss prakkpwlsl lvihnkyqgy gyakkiymty enitnkysvf k
//
LOCUS       WP_258072961             151 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Brevibacillus
            laterosporus].
ACCESSION   WP_258072961
VERSION     WP_258072961.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus laterosporus
  ORGANISM  Brevibacillus laterosporus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
REFERENCE   1  (residues 1 to 151)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 151)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 151)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Brevibacillus laterosporus"
                     /db_xref="taxon:1465"
     Protein         1..151
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=16678
     Region          <2..114
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
ORIGIN      
        1 mkkvaearkk idgivkeget vsvvqvagks lyvlaaeggn ygsstiyqml qlpptkkaln
       61 mkegfesisl evlpeymgdh ifiygagdeg adqiihsdlw rkipavqkgq iymygsfgdk
      121 gdefvmedpy slelqldtiv dvllakkkek w
//
LOCUS       WP_258072980              94 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Brevibacillus laterosporus].
ACCESSION   WP_258072980
VERSION     WP_258072980.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus laterosporus
  ORGANISM  Brevibacillus laterosporus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
REFERENCE   1  (residues 1 to 94)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 94)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Brevibacillus laterosporus"
                     /db_xref="taxon:1465"
     Protein         1..94
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=10476
     Region          <2..>41
                     /region_name="ElaA"
                     /note="Predicted N-acyltransferase, GNAT family [General
                     function prediction only]; COG2153"
                     /db_xref="CDD:441756"
ORIGIN      
        1 mlvaldgdvi aavlrfypkk stqtislyqf avaknyrgkg llytmlqnfg dypievlcpi
       61 qgslntyysi kgwqckgqnk gcnlwqwsvg atcr
//
LOCUS       WP_258073022             151 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter, partial [Rathayibacter rathayi].
ACCESSION   WP_258073022
VERSION     WP_258073022.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter rathayi
  ORGANISM  Rathayibacter rathayi
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Rathayibacter rathayi"
                     /db_xref="taxon:33887"
     Protein         <1..151
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          24..>132
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 tstarstgap papdkrawhs livllagrfi alldttivnv alptirttld asestlswii
       61 sgyalafgla lipagrlgdr fghkwvvvsg valftvasva cglaaddaql vvarvvrgla
      121 ggivvpavta yiqlaafalv fvlpksvsrr s
//
LOCUS       WP_258073032             444 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Xanthomonas arboricola].
ACCESSION   WP_258073032
VERSION     WP_258073032.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14559.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..444
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=50003
     Region          <17..>436
                     /region_name="PGA_TPR_OMP"
                     /note="poly-beta-1,6 N-acetyl-D-glucosamine export porin
                     PgaA; TIGR03939"
                     /db_xref="CDD:274868"
     Site            order(136..137,139,162,165..166,171..172,174..175,198,
                     201..202,205..206,209)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          160..192
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          197..222
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(250..251,254..255,257,281,284..285,288..289,
                     291..292,315,318..319,322..323,326)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          250..274
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          279..309
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          314..337
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mtdastaltp mrqaeqlrgq qrhadalaiy ervlranprd rgaytmrait lselgsaqla
       61 aeavwrhpdw fsqqererie ndrlarmigw asaepvdaah ryaetdqalv nvarierqsp
      121 ptltweatrl rvdslvalnq rqrhrdvvan yqalqtegie vpayvlptvg dslmglrrpa
      181 eaeaalrqal qhnpddfntq lllgyalleq erfdlamplf eklaatqapw prrngagsgy
      241 enwdrfsadi alatarsaan hnrdadallr ervaigpdna elqaalasie frrghpskal
      301 qrnamaltld phqkqarsgv veaqrdldrl dlaeatfapl hkeypddagl qrlgaslerq
      361 rgwqvhlsha rgrsdndtlt nstsplgndf gstwleaesp llgerwrvgl rarddwadfq
      421 dtrvryrsfw lgthyrydrl dvsa
//
LOCUS       WP_258073042             166 aa            linear   BCT 02-MAR-2025
DEFINITION  cysteine peptidase family C39 domain-containing protein, partial
            [Xanthomonas arboricola].
ACCESSION   WP_258073042
VERSION     WP_258073042.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 166)
  AUTHORS   Havarstein,L.S., Diep,D.B. and Nes,I.F.
  TITLE     A family of bacteriocin ABC transporters carry out proteolytic
            processing of their substrates concomitant with export
  JOURNAL   Mol Microbiol 16 (2), 229-240 (1995)
   PUBMED   7565085
REFERENCE   2  (residues 1 to 166)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015377.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03412.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..>166
                     /product="cysteine peptidase family C39 domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          31..157
                     /region_name="Peptidase_C39_like"
                     /note="Peptidase family C39 mostly contains
                     bacteriocin-processing endopeptidases from bacteria. The
                     cysteine peptidases in family C39 cleave the
                     'double-glycine' leader peptides from the precursors of
                     various bacteriocins (mostly non-lantibiotic). The
                     cleavage...; cl00296"
                     /db_xref="CDD:469710"
     Site            order(36,42,115,131)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:239073"
ORIGIN      
        1 mkdvltpsad gdaepdrsae pslvfsskrr vphirqtess ecglaciaml lsyyghetsl
       61 gelrnrftvs tsgatlasli eiadangltt rplrlelyel pklslpcmvh lhhghfvvlt
      121 avrgghvhis dpatgvkkik ldefdelfsg ialeahpgpa fkkiks
//
LOCUS       WP_258073111             154 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail terminator family protein [Brevibacillus laterosporus].
ACCESSION   WP_258073111
VERSION     WP_258073111.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus laterosporus
  ORGANISM  Brevibacillus laterosporus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF044614.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20765.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Brevibacillus laterosporus"
                     /db_xref="taxon:1465"
     Protein         1..154
                     /product="phage tail terminator family protein"
                     /calculated_mol_wt=17968
ORIGIN      
        1 mgvqleevis ieitindvrn avmsaikkay atakvygeql pqgfkepcff vlmlegsqdk
       61 eldrrykrfh pfdihyfass nseryevaek ltdilgliem qgkpirgtkm rhtivddvlh
      121 ffvdynfhvv rpkptvpkmq rnwiergiky eqek
//
LOCUS       WP_258073142             546 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Brevibacillus
            laterosporus].
ACCESSION   WP_258073142
VERSION     WP_258073142.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus laterosporus
  ORGANISM  Brevibacillus laterosporus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
REFERENCE   1  (residues 1 to 546)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 546)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 546)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Brevibacillus laterosporus"
                     /db_xref="taxon:1465"
     Protein         1..546
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=64078
     Region          194..276
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
     Region          280..527
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(361..362,366,389)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238558"
ORIGIN      
        1 mddttcrsst dkcmldelsf rlrsievvkg galcqlkqql vfsyalivmt sgevqlvldh
       61 qqceldrnsv yvcmpgqtfg tialseemel yvlyfdvfrh einhvsymav skdeqlfpyk
      121 gkisvyppdk lpsmceelyr rwqgrtstgs frcqidfqei lfyinkncrt kpenaysale
      181 yvkqymeehy tdsltidqla qvaeispkyf vdlfkkkygi sameyvaelr lqqakrlmaq
      241 sdarlrdiah qvgyadefyf srkfkkeigv spnvymksrr rklvayspsh igyllplnim
      301 pyaaplhpkw teyyyreyrn dipvhisayr qnqnwqanie lltqipadvi ianddlhdte
      361 kqalekiapv fylsvsqmew rqqfrlladf fgeswqaekw ldeydrklqt vreqlqpgme
      421 ketvvivrll qqnmfvhsnr giagilydel qfrptcvsel vnnhkpisie elkalnadrl
      481 fmmirqeset lanwekiqnk pqwqtisavq qnkihmltsd pwleysphah lrmldhitql
      541 iavnrp
//
LOCUS       WP_258072994             131 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaB-like helicase N-terminal domain-containing protein
            [Brevibacillus laterosporus].
ACCESSION   WP_258072994
VERSION     WP_258072994.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus laterosporus
  ORGANISM  Brevibacillus laterosporus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
REFERENCE   1  (residues 1 to 131)
  AUTHORS   Fass,D., Bogden,C.E. and Berger,J.M.
  TITLE     Crystal structure of the N-terminal domain of the DnaB hexameric
            helicase
  JOURNAL   Structure 7 (6), 691-698 (1999)
   PUBMED   10404598
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012974.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00772.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Brevibacillus laterosporus"
                     /db_xref="taxon:1465"
     Protein         1..131
                     /product="DnaB-like helicase N-terminal domain-containing
                     protein"
                     /GO_function="GO:0003678 - DNA helicase activity [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /calculated_mol_wt=14612
     Region          10..>131
                     /region_name="DnaB"
                     /note="Replicative DNA helicase [Replication,
                     recombination and repair]; COG0305"
                     /db_xref="CDD:440074"
ORIGIN      
        1 mfnmqemphs heaeqavigs ilkepviiek vlervnhesl yqplhkkilm amtelfesgt
       61 kidiltvttk lasdnlfisa gssvyltdlq asistietin yhvgivaeqa nrrklirlge
      121 qlqkdghslt r
//
LOCUS       WP_258073189              81 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA translocase FtsK [Brevibacillus laterosporus].
ACCESSION   WP_258073189
VERSION     WP_258073189.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus laterosporus
  ORGANISM  Brevibacillus laterosporus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
REFERENCE   1  (residues 1 to 81)
  AUTHORS   Sivanathan,V., Allen,M.D., de Bekker,C., Baker,R.,
            Arciszewska,L.K., Freund,S.M., Bycroft,M., Lowe,J. and
            Sherratt,D.J.
  TITLE     The FtsK gamma domain directs oriented DNA translocation by
            interacting with KOPS
  JOURNAL   Nat Struct Mol Biol 13 (11), 965-972 (2006)
   PUBMED   17057717
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020952.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09397.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Brevibacillus laterosporus"
                     /db_xref="taxon:1465"
     Protein         1..81
                     /product="DNA translocase FtsK"
                     /calculated_mol_wt=9464
     Region          20..81
                     /region_name="FtsK_gamma"
                     /note="Ftsk gamma domain; pfam09397"
                     /db_xref="CDD:462786"
ORIGIN      
        1 mnktneliek lkehhsnlys dfeeryqeav qivketkqcs vtmlqrkirv gyvyaarivd
       61 rmekeglvsp yrgsaprevy i
//
LOCUS       WP_258073209             271 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease [Brevibacillus laterosporus].
ACCESSION   WP_258073209
VERSION     WP_258073209.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus laterosporus
  ORGANISM  Brevibacillus laterosporus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
REFERENCE   1  (residues 1 to 271)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024141.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12730.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Brevibacillus laterosporus"
                     /db_xref="taxon:1465"
     Protein         1..271
                     /product="ABC transporter permease"
                     /calculated_mol_wt=30450
     Region          <73..208
                     /region_name="NosY"
                     /note="ABC-type transport system involved in multi-copper
                     enzyme maturation, permease component [Posttranslational
                     modification, protein turnover, chaperones]; COG1277"
                     /db_xref="CDD:440888"
ORIGIN      
        1 mfystfiyew ekfwgkktnv lcfiavpfiv wlactfslet nvkvkmtdva fssnmnfhit
       61 slqemlltac naitivfisl sfneeyrsgs lrmayvrpis ikqvywaktc slivvilffl
      121 alqflvsfll gqfvlphvne ttlffregly sgydviifsi kyyglaflsl lvfgaviesi
      181 slacktitgt igaslgflfa sgifvvmlge fakgssyeha ilsmsllytq akgiaffasg
      241 ssnvylftlf iqlllfkais yalftttdyf e
//
LOCUS       WP_258073225             524 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Brevibacillus
            laterosporus].
ACCESSION   WP_258073225
VERSION     WP_258073225.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus laterosporus
  ORGANISM  Brevibacillus laterosporus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Brevibacillus laterosporus"
                     /db_xref="taxon:1465"
     Protein         1..524
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=58632
     Region          4..>54
                     /region_name="NlpA"
                     /note="ABC-type metal ion transport system, periplasmic
                     component/surface antigen [Inorganic ion transport and
                     metabolism]; COG1464"
                     /db_xref="CDD:441073"
     Region          40..516
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mktmkkmfgi vismlaaisl vgcssnnqda skkdekatvn iaissesnaq kldatsydad
       61 malygavyep lveygekgaf kpglaeswei sedgkkyvfh lkkdvkfsdg sdvnaeavkf
      121 tidrakakne tsalqtltnl ekieviddtt vamhftkisn qvlaelcqtr plrimsphsv
      181 egekvdgafk eaigtgaftv keisaeqvlm epnpyynhgn pvnyqvnfkt iedgssrtla
      241 lksgevdvvg gtlgsitdsd inslrkdksy nvhkfegtvs hflafnpdnq vltstirkgi
      301 elavnkstls dkklvglfre nvkyvstdnq enipydlnka rsmfesegyv enaegyyeka
      361 nnvlafdlvi qttefpewke qaeiiesdlk kagvkvnini fdsesyydvl wnkkkydmif
      421 yrtftdallp ynflnslyhn taeghgvlan dekltnlldd favtiqekkq qqifdnifkr
      481 iseetlaipi dykdekfvts skisefhysg lsdapidfkk lvvk
//
LOCUS       WP_258073288             232 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Brevibacillus
            laterosporus].
ACCESSION   WP_258073288
VERSION     WP_258073288.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus laterosporus
  ORGANISM  Brevibacillus laterosporus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
REFERENCE   1  (residues 1 to 232)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 232)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 232)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Brevibacillus laterosporus"
                     /db_xref="taxon:1465"
     Protein         1..232
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=25929
     Region          1..>209
                     /region_name="FecB"
                     /note="ABC-type Fe3+-citrate transport system, periplasmic
                     component [Inorganic ion transport and metabolism];
                     COG4594"
                     /db_xref="CDD:443650"
ORIGIN      
        1 mnllkrirtk ggifllfalv lsacgnnasp ieqkettqek qaetriykte kgditipahp
       61 qrvvvgvqdy vgdvlalgik pvgaacwvfd tpyykghldg vvkvgdkqgv smetiiglkp
      121 dliltyqees yeqlskiast vfipygksty rdrliemgki lnkeaetkdw lsnfdkkiae
      181 kkkelfqkvn pneqvaivei sdkdifiygm glathgrysp nnawiipqkv ys
//
LOCUS       WP_258073291              55 aa            linear   BCT 02-MAR-2025
DEFINITION  HNH endonuclease [Brevibacillus laterosporus].
ACCESSION   WP_258073291
VERSION     WP_258073291.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus laterosporus
  ORGANISM  Brevibacillus laterosporus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
REFERENCE   1  (residues 1 to 55)
  AUTHORS   Zhang,L., Huang,Y., Xu,D., Yang,L., Qian,K., Chang,G., Gong,Y.,
            Zhou,X. and Ma,K.
  TITLE     Biochemical characterization of a thermostable HNH endonuclease
            from deep-sea thermophilic bacteriophage GVE2
  JOURNAL   Appl Microbiol Biotechnol 100 (18), 8003-8012 (2016)
   PUBMED   27131500
REFERENCE   2  (residues 1 to 55)
  AUTHORS   Dalgaard,J.Z., Klar,A.J., Moser,M.J., Holley,W.R., Chatterjee,A.
            and Mian,I.S.
  TITLE     Statistical modeling and analysis of the LAGLIDADG family of
            site-specific endonucleases and identification of an intein that
            encodes a site-specific endonuclease of the HNH family
  JOURNAL   Nucleic Acids Res 25 (22), 4626-4638 (1997)
   PUBMED   9358175
REFERENCE   3  (residues 1 to 55)
  AUTHORS   Shub,D.A., Goodrich-Blair,H. and Eddy,S.R.
  TITLE     Amino acid sequence motif of group I intron endonucleases is
            conserved in open reading frames of group II introns
  JOURNAL   Trends Biochem Sci 19 (10), 402-404 (1994)
   PUBMED   7817395
REFERENCE   4  (residues 1 to 55)
  AUTHORS   Gorbalenya,A.E.
  TITLE     Self-splicing group I and group II introns encode homologous
            (putative) DNA endonucleases of a new family
  JOURNAL   Protein Sci 3 (7), 1117-1120 (1994)
   PUBMED   7920259
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013964.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01844.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..55
                     /organism="Brevibacillus laterosporus"
                     /db_xref="taxon:1465"
     Protein         1..55
                     /product="HNH endonuclease"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=6481
ORIGIN      
        1 mpqkgdktlf wyrnnwqpic eqchnrktar eiealgdnls iysrhdlydg rclvk
//
LOCUS       WP_258073356             227 aa            linear   BCT 02-MAR-2025
DEFINITION  C39 family peptidase [Brevibacillus laterosporus].
ACCESSION   WP_258073356
VERSION     WP_258073356.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus laterosporus
  ORGANISM  Brevibacillus laterosporus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024919.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13529.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Brevibacillus laterosporus"
                     /db_xref="taxon:1465"
     Protein         1..227
                     /product="C39 family peptidase"
                     /calculated_mol_wt=26077
     Region          71..>188
                     /region_name="Peptidase_C39_like"
                     /note="Peptidase family C39 mostly contains
                     bacteriocin-processing endopeptidases from bacteria. The
                     cysteine peptidases in family C39 cleave the
                     'double-glycine' leader peptides from the precursors of
                     various bacteriocins (mostly non-lantibiotic). The
                     cleavage...; cl00296"
                     /db_xref="CDD:469710"
ORIGIN      
        1 mnlekiivii eyepqkagis mktvpyfsqw esrqlvsdfl sgklhpaddp lwhlsgavdr
       61 deyahwsfhi cgmaclkmll ahwhnriipm ielmkqcrdy ggyvvqedgs ikglfyrpfv
      121 sfiaeryalq aevkehtpie eiydlldqgy vyiasvhpti rtpemtppkq gghlvyvfgr
      181 dtqrqelifh npsgntaasq envhlscevf arfyakrgil ikesraf
//
LOCUS       WP_258073365             304 aa            linear   BCT 02-MAR-2025
DEFINITION  BadF/BadG/BcrA/BcrD ATPase family protein [Brevibacillus
            laterosporus].
ACCESSION   WP_258073365
VERSION     WP_258073365.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus laterosporus
  ORGANISM  Brevibacillus laterosporus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   Breese,K., Boll,M., Alt-Morbe,J., Schagger,H. and Fuchs,G.
  TITLE     Genes coding for the benzoyl-CoA pathway of anaerobic aromatic
            metabolism in the bacterium Thauera aromatica
  JOURNAL   Eur J Biochem 256 (1), 148-154 (1998)
   PUBMED   9746358
REFERENCE   2  (residues 1 to 304)
  AUTHORS   Egland,P.G., Pelletier,D.A., Dispensa,M., Gibson,J. and
            Harwood,C.S.
  TITLE     A cluster of bacterial genes for anaerobic benzene ring
            biodegradation
  JOURNAL   Proc Natl Acad Sci U S A 94 (12), 6484-6489 (1997)
   PUBMED   9177244
REFERENCE   3  (residues 1 to 304)
  AUTHORS   Bendrat,K., Muller,U., Klees,A.G. and Buckel,W.
  TITLE     Identification of the gene encoding the activator of
            (R)-2-hydroxyglutaryl-CoA dehydratase from Acidaminococcus
            fermentans by gene expression in Escherichia coli
  JOURNAL   FEBS Lett 329 (3), 329-331 (1993)
   PUBMED   8365476
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013986.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01869.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Brevibacillus laterosporus"
                     /db_xref="taxon:1465"
     Protein         1..304
                     /product="BadF/BadG/BcrA/BcrD ATPase family protein"
                     /calculated_mol_wt=32642
     Region          7..296
                     /region_name="ASKHA_NBD_eukNAGK-like"
                     /note="nucleotide-binding domain (NBD) of the
                     eukaryotic-type N-acetylglucosamine kinase (NAGK) family;
                     cd24007"
                     /db_xref="CDD:466857"
ORIGIN      
        1 mkklayiigv dgggtktiav aynfqgtela raengygnvl vhtetaishm iqaieqcqsa
       61 ivddsecvyl flglagiegg threvvetsl qerfgiplti tndariahaa clqgkdgilt
      121 iagtgavalg vhkgqslmtg gwghllgdeg sgywigieal rqlileeecg leysslgqvl
      181 venlkiqkaa qmkgfvysss kdkiaaltpl vvreaeagep naqrilrmag kylaqmtirl
      241 yhkskfeapv sialkgsvlt kitivqkafy kevkklipda vfvidevcss kgayylamqa
      301 mseq
//
LOCUS       WP_258073424              91 aa            linear   BCT 02-MAR-2025
DEFINITION  Gfo/Idh/MocA family oxidoreductase, partial [Brevibacillus
            laterosporus].
ACCESSION   WP_258073424
VERSION     WP_258073424.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus laterosporus
  ORGANISM  Brevibacillus laterosporus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
REFERENCE   1  (residues 1 to 91)
  AUTHORS   Kingston,R.L., Scopes,R.K. and Baker,E.N.
  TITLE     The structure of glucose-fructose oxidoreductase from Zymomonas
            mobilis: an osmoprotective periplasmic enzyme containing
            non-dissociable NADP
  JOURNAL   Structure 4 (12), 1413-1428 (1996)
   PUBMED   8994968
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014893.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02894.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Brevibacillus laterosporus"
                     /db_xref="taxon:1465"
     Protein         <1..91
                     /product="Gfo/Idh/MocA family oxidoreductase"
     Region          <1..91
                     /region_name="PRK10206"
                     /note="putative oxidoreductase; Provisional"
                     /db_xref="CDD:182305"
ORIGIN      
        1 tslkanimpg epgfaaddsv gvleyvndeg vtvreemkpe mgdygrvyda lyqtithgap
       61 nyvkesevln nleilergfe qaspstvtla k
//
LOCUS       WP_258073425             129 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase, partial [Brevibacillus
            laterosporus].
ACCESSION   WP_258073425
VERSION     WP_258073425.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus laterosporus
  ORGANISM  Brevibacillus laterosporus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
REFERENCE   1  (residues 1 to 129)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 129)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Brevibacillus laterosporus"
                     /db_xref="taxon:1465"
     Protein         <1..>129
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          1..>129
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 adrniivwmd hratgqaeki natghpvlry vggkispemq tpkilwlken rphiyqqarh
       61 ffdladyltw rstgdearsv ctvtckwtyl aheqrwdagy frqigleela dedfvrigqr
      121 ivdpgtpcg
//
LOCUS       WP_258073457             432 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase 87 family protein [Arthrobacter sp. 08Y14].
ACCESSION   WP_258073457
VERSION     WP_258073457.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. 08Y14
  ORGANISM  Arthrobacter sp. 08Y14
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 432)
  AUTHORS   Birch,H.L., Alderwick,L.J., Bhatt,A., Rittmann,D., Krumbach,K.,
            Singh,A., Bai,Y., Lowary,T.L., Eggeling,L. and Besra,G.S.
  TITLE     Biosynthesis of mycobacterial arabinogalactan: identification of a
            novel alpha(1-->3) arabinofuranosyltransferase
  JOURNAL   Mol Microbiol 69 (5), 1191-1206 (2008)
   PUBMED   18627460
REFERENCE   2  (residues 1 to 432)
  AUTHORS   Morita,Y.S., Sena,C.B., Waller,R.F., Kurokawa,K., Sernee,M.F.,
            Nakatani,F., Haites,R.E., Billman-Jacobe,H., McConville,M.J.,
            Maeda,Y. and Kinoshita,T.
  TITLE     PimE is a polyprenol-phosphate-mannose-dependent
            mannosyltransferase that transfers the fifth mannose of
            phosphatidylinositol mannoside in mycobacteria
  JOURNAL   J Biol Chem 281 (35), 25143-25155 (2006)
   PUBMED   16803893
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021134.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09594.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Arthrobacter sp. 08Y14"
                     /db_xref="taxon:2058885"
     Protein         1..432
                     /product="glycosyltransferase 87 family protein"
                     /GO_function="GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=47059
     Region          39..409
                     /region_name="PMT_2"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; cl21590"
                     /db_xref="CDD:473917"
ORIGIN      
        1 mglktrsgma rlavtlaalf aaalmitaaf visprhgldf svyltggqsv idaggelytk
       61 elryregssl lftyppfsal lfavlapfgq slglniftgi slliaaatav lgvayafrqp
      121 gvravlkhqw lrplalagig fvillgpwre tlafgqinil lfglimadfl ikrdtwptgl
      181 ltgvaaglkl tplvfglyyl argdwrglrn mtfgflatfg lgflilpres rtywaellpd
      241 tsriggagyv dnlgikgail hftgpdfpvd lpwlllsllm iaaaaviirl agnrgdllta
      301 laatallmll ispvswshhw vwvalfipvl wrniadftqq gtgvrrwgmv llvssfvvfl
      361 lspkaigwlm gapnldsqip eawlmassag vfwgvglmaw wlvalwksrp qrwwkqsvse
      421 qiplapvknv qp
//
LOCUS       WP_258073552             429 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Arthrobacter sp. 08Y14].
ACCESSION   WP_258073552
VERSION     WP_258073552.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. 08Y14
  ORGANISM  Arthrobacter sp. 08Y14
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Arthrobacter sp. 08Y14"
                     /db_xref="taxon:2058885"
     Protein         1..429
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=42050
     Region          29..419
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(36..37,40..41,44,76,129..130,132..134,137,156,
                     159..160,163,251,254..255,258..260,263,290,294,345..346,
                     350,354,370,373..374,377..378,381)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mnrppdaggp aaldeatrar vqrrtltvvi msqvlggagl aagvtvgall aqemlgsdgl
       61 aglpaglftl gsaltaylvg rvtqrsgrrv glgagfaagg agalgvvlaa vvgspallfa
      121 alfvygagta tnlqaryagt dlapparrgq aisiamvstt lgavagpnlv tpmgrladgl
      181 gipalagpfl lagaaylaag vvllalmrpd pfllarrlna gaaddaaaaa gaaapaparp
      241 gngayagaav mvltqiamva imtmtpvhmr vhhhgladvg lvigihigam ylpslvtgvl
      301 vdrvgrlpma aaagvtllla gvtaalapge slgllilala llglgwnfgl iagtalvvdh
      361 tapetrpqvq gridvlvala gagggmlsgv vmagtsyatl alsggilall lipvlvwarr
      421 tsvveaagr
//
LOCUS       WP_258073597             252 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Arthrobacter sp. 08Y14].
ACCESSION   WP_258073597
VERSION     WP_258073597.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. 08Y14
  ORGANISM  Arthrobacter sp. 08Y14
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 252)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Arthrobacter sp. 08Y14"
                     /db_xref="taxon:2058885"
     Protein         1..252
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=25886
     Region          1..217
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 msannpvtvl laddhsaira glrmileslg gftvvgeaad gaaavrmara lrpdvvlmdl
       61 rmpgmdgiaa taeitgqals avlvlttfdi deyvhaalra gaagfllksv epaelvrava
      121 svadgdsvls pavtrtviaa fvqgqppaaa pglpapapgr ltepltaree vvlaclgegl
      181 snqqitrrlg iaettvkthv srvlaklgva srvqaaiayr etaayretak hgetaasret
      241 aaspewaggr eh
//
LOCUS       WP_258073608             163 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6993 domain-containing protein [Arthrobacter sp. 08Y14].
ACCESSION   WP_258073608
VERSION     WP_258073608.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. 08Y14
  ORGANISM  Arthrobacter sp. 08Y14
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046846.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22504.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Arthrobacter sp. 08Y14"
                     /db_xref="taxon:2058885"
     Protein         1..163
                     /product="DUF6993 domain-containing protein"
                     /calculated_mol_wt=16337
ORIGIN      
        1 mirvhrssrl sgvtlsllli gsagllapaa apaspagslq nstaaqavtp iqgaavlpda
       61 ktllpmaaer tpesltkale alaaesptpd ramirkafte agfpgdsvev slditptgla
      121 vdsirgaaav dgsclfgevr qgavsvsvlp vldsgycfvg dqr
//
LOCUS       WP_258072996              59 aa            linear   BCT 02-MAR-2025
DEFINITION  TrmO family methyltransferase domain-containing protein
            [Brevibacillus laterosporus].
ACCESSION   WP_258072996
VERSION     WP_258072996.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus laterosporus
  ORGANISM  Brevibacillus laterosporus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
REFERENCE   1  (residues 1 to 59)
  AUTHORS   Kang,B.I., Miyauchi,K., Matuszewski,M., D'Almeida,G.S.,
            Rubio,M.A.T., Alfonzo,J.D., Inoue,K., Sakaguchi,Y., Suzuki,T.,
            Sochacka,E. and Suzuki,T.
  TITLE     Identification of 2-methylthio cyclic N6-threonylcarbamoyladenosine
            (ms2ct6A) as a novel RNA modification at position 37 of tRNAs
  JOURNAL   Nucleic Acids Res 45 (4), 2124-2136 (2017)
   PUBMED   27913733
REFERENCE   2  (residues 1 to 59)
  AUTHORS   Kimura,S., Miyauchi,K., Ikeuchi,Y., Thiaville,P.C.,
            Crecy-Lagard,Vd. and Suzuki,T.
  TITLE     Discovery of the beta-barrel-type RNA methyltransferase responsible
            for N6-methylation of N6-threonylcarbamoyladenosine in tRNAs
  JOURNAL   Nucleic Acids Res 42 (14), 9350-9365 (2014)
   PUBMED   25063302
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014082.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01980.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..59
                     /organism="Brevibacillus laterosporus"
                     /db_xref="taxon:1465"
     Protein         1..59
                     /product="TrmO family methyltransferase domain-containing
                     protein"
                     /EC_number="2.1.1.-"
                     /calculated_mol_wt=6571
     Region          <2..51
                     /region_name="UPF0066"
                     /note="Escherichia coli YaeB and related proteins;
                     cl00749"
                     /db_xref="CDD:469902"
ORIGIN      
        1 mgttavaimd ihkdrlivkg ldaihgtpvl dmkpyfpafd hvsdvqvpdw vgylmkhyf
//
LOCUS       WP_258073629             293 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase-like protein [Arthrobacter sp. 08Y14].
ACCESSION   WP_258073629
VERSION     WP_258073629.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. 08Y14
  ORGANISM  Arthrobacter sp. 08Y14
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024848.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13456.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Arthrobacter sp. 08Y14"
                     /db_xref="taxon:2058885"
     Protein         1..293
                     /product="reverse transcriptase-like protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /calculated_mol_wt=32050
     Region          2..>166
                     /region_name="PRK07238"
                     /note="bifunctional RNase H/acid phosphatase; Provisional"
                     /db_xref="CDD:180903"
     Region          168..291
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 miveadggsr gnpghagyga lvrdpetgri laekaqyigk asnnvaeysg lvaalemahd
       61 idpdcwilak mdsklvveqm sgrwkikhed mqklaakarg ivnprrvkyq wiprelnkda
      121 drlsneamda gmagvpwvqk saaatalqep kevsqldaes kptatgrlhh telwvrdfaa
      181 aeaslgwlle rlgylradsw ktgarwqgad syvvieagpd vldtayerrr pglnhlafca
      241 gsradvdlla rraashgwtl lftdrhphag gpdhyaayle nsagfevelv aed
//
LOCUS       WP_258073653             229 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6318 family protein [Arthrobacter sp. 08Y14].
ACCESSION   WP_258073653
VERSION     WP_258073653.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. 08Y14
  ORGANISM  Arthrobacter sp. 08Y14
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040060.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19843.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Arthrobacter sp. 08Y14"
                     /db_xref="taxon:2058885"
     Protein         1..229
                     /product="DUF6318 family protein"
                     /calculated_mol_wt=23880
     Region          74..225
                     /region_name="DUF6318"
                     /note="Family of unknown function (DUF6318); pfam19843"
                     /db_xref="CDD:437675"
ORIGIN      
        1 mfrtracsav pvsvrlgaaa vaavlvlvgc sgsgdpeaea agngsssasp tgsatpsetv
       61 tptatptptp taaykpatae gpaenvplpv mpelakeksk egleafaeyw yslinygyet
      121 gdpgplravs adtcfacesy yavlkngyse newmvgaklh lqdlssnyve tdegafqati
      181 lilqddlqyy gpaghlgtdq gtsspavqlm eavfttegwy vvtletlem
//
LOCUS       WP_258073711              68 aa            linear   BCT 02-MAR-2025
DEFINITION  FCD domain-containing protein [Arthrobacter sp. 08Y14].
ACCESSION   WP_258073711
VERSION     WP_258073711.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. 08Y14
  ORGANISM  Arthrobacter sp. 08Y14
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 68)
  AUTHORS   van Aalten,D.M., DiRusso,C.C., Knudsen,J. and Wierenga,R.K.
  TITLE     Crystal structure of FadR, a fatty acid-responsive transcription
            factor with a novel acyl coenzyme A-binding fold
  JOURNAL   EMBO J 19 (19), 5167-5177 (2000)
   PUBMED   11013219
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019349.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07729.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Arthrobacter sp. 08Y14"
                     /db_xref="taxon:2058885"
     Protein         1..68
                     /product="FCD domain-containing protein"
                     /calculated_mol_wt=7796
     Region          <6..58
                     /region_name="GntR"
                     /note="DNA-binding transcriptional regulator, GntR family
                     [Transcription]; COG1802"
                     /db_xref="CDD:441407"
ORIGIN      
        1 mpprptlsvd qrwddaldeh ealiaaidrq dveaarelar ahmetarrir lkllregale
       61 qplrpyvr
//
LOCUS       WP_258073743             234 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY-family carbohydrate kinase, partial [Arthrobacter sp. 08Y14].
ACCESSION   WP_258073743
VERSION     WP_258073743.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. 08Y14
  ORGANISM  Arthrobacter sp. 08Y14
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 234)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 234)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02782.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Arthrobacter sp. 08Y14"
                     /db_xref="taxon:2058885"
     Protein         <1..>234
                     /product="FGGY-family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <2..233
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 qgltleaaea mglkpgtaga agmidahagg igtagiggkp tenlayvfgt ssctmtstad
       61 pvfvpgvwgp yysamvpgmw lneggqsaag aaidqllsfh paaaeatara qaegkslpaf
      121 maehaalkia daseavdlaa glhvvpeflg nrapfadpha raviaglgme rdfeslialy
      181 iaglcgigyg lrqiietqak sgasvervvi sggagasplv rqiladacck pvva
//
LOCUS       WP_258073763             335 aa            linear   BCT 02-MAR-2025
DEFINITION  cellulase family glycosylhydrolase [Klebsiella pneumoniae].
ACCESSION   WP_258073763
VERSION     WP_258073763.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012377.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00150.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..335
                     /product="cellulase family glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0000272 - polysaccharide catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=38398
     Region          <115..>258
                     /region_name="agarase_cat"
                     /note="alpha-beta barrel catalytic domain of agarase, such
                     as GH86-like endo-acting agarases identified in non-marine
                     organisms; cd21510"
                     /db_xref="CDD:411072"
ORIGIN      
        1 mliiliavfn pcysfelgig thfssypgqp dkylrliksy gftsirddyt wnkiedvkdd
       61 fnsrgkiakv dkainqaasf nintlvvldy gnkhynsnyy pnteeslnay nryvewtarh
      121 lkgkvkyyei wnewtigtgi kkdgkippsv ddyynlvklt satirkedpn aiilagsinp
      181 lsdkprfigv sdeqwitali kkgmleyidg islhpysyan sseslrtvkg nidaidsfhd
      241 riklisgkei pfyitemgvp thyghggvsl deqsdfiney srevmnrkyi kglwwydlin
      301 dggnilnked nfgffyenls pkpvmqdfkk nlisk
//
LOCUS       WP_258073776             318 aa            linear   BCT 02-MAR-2025
DEFINITION  pilus assembly protein TadG-related protein [Arthrobacter sp. Y81].
ACCESSION   WP_258073776
VERSION     WP_258073776.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. Y81
  ORGANISM  Arthrobacter sp. Y81
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 318)
  AUTHORS   Tomich,M., Planet,P.J. and Figurski,D.H.
  TITLE     The tad locus: postcards from the widespread colonization island
  JOURNAL   Nat Rev Microbiol 5 (5), 363-375 (2007)
   PUBMED   17435791
REFERENCE   2  (residues 1 to 318)
  AUTHORS   Kachlany,S.C., Planet,P.J., Bhattacharjee,M.K., Kollia,E.,
            DeSalle,R., Fine,D.H. and Figurski,D.H.
  TITLE     Nonspecific adherence by Actinobacillus actinomycetemcomitans
            requires genes widespread in bacteria and archaea
  JOURNAL   J Bacteriol 182 (21), 6169-6176 (2000)
   PUBMED   11029439
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13400.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Arthrobacter sp. Y81"
                     /db_xref="taxon:2058897"
     Protein         1..318
                     /product="pilus assembly protein TadG-related protein"
                     /calculated_mol_wt=32716
     Region          1..>116
                     /region_name="TadX"
                     /note="Uncharacterized conserved protein, contains
                     TadX/Tad_C domain [General function prediction only];
                     COG4655"
                     /db_xref="CDD:443693"
ORIGIN      
        1 mivvlmgfaa iavdvgamya ekaqlqngad ssalaiagdc angscgdvda tgallanans
       61 ndstsgvssi tfpsattvrv etntreagsg antfslffar vmgfettdir avaeatwgap
      121 naattlpwti sqcvfeqyls psqlaelnst gnftgdpipt hillrydent pdypgcvpqn
      181 gyaeggfgwl drdtgcsadi niaeaeignd pgndfpnect gilaglmgep ilvpifstat
      241 gtgqhatygl vgfiafqvtg ykfgggpslt nldpaapsct gncrgiqgff tryvsleegl
      301 stsggtpnyg atsvwlsk
//
LOCUS       WP_258073841             418 aa            linear   BCT 02-MAR-2025
DEFINITION  alanine racemase [Arthrobacter sp. Y81].
ACCESSION   WP_258073841
VERSION     WP_258073841.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. Y81
  ORGANISM  Arthrobacter sp. Y81
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 418)
  AUTHORS   Shaw,J.P., Petsko,G.A. and Ringe,D.
  TITLE     Determination of the structure of alanine racemase from Bacillus
            stearothermophilus at 1.9-A resolution
  JOURNAL   Biochemistry 36 (6), 1329-1342 (1997)
   PUBMED   9063881
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013345.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01168.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Arthrobacter sp. Y81"
                     /db_xref="taxon:2058897"
     Protein         1..418
                     /product="alanine racemase"
                     /EC_number="5.1.1.1"
                     /calculated_mol_wt=44424
     Region          30..390
                     /region_name="PLPDE_III"
                     /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
                     Enzymes; cl00261"
                     /db_xref="CDD:469695"
     Site            order(56,58,99,153,188,190,260..263)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate (PLP) binding site [chemical
                     binding]"
                     /db_xref="CDD:143492"
     Site            58
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:143492"
ORIGIN      
        1 msspiqrhse rdegsaapaa tapaypqlrl nsdalennir vmaswcrerh vdlaphvktt
       61 msapiitrqm aagavgvtva tvdqtasala wghrhvlian qvvdrlgltr lrswleedsg
      121 reircfvdsa agigaaaqvf daeagaalev lldvgtpggr tgirslqeav riaelvraap
      181 glrlvgvagy egvvpnsrae etiaavdrhc rlvrdvylev arfyetpapi ysmggsafpd
      241 rvaeylpdes qvagtrrilr sgcyvthdhg tyagvspvpg llpaltvrav vlsipedgma
      301 vvgagkrdlp ydaglpvvls vqaadgalkd gatavvrnlf dhhtvltgvs gldvtdvvdf
      361 gishpcsafd rwpeyvvtdg tgqeigvwht dfhrssllrp tgeprqecrv sgpvvtgr
//
LOCUS       WP_258073867             422 aa            linear   BCT 02-MAR-2025
DEFINITION  wax ester/triacylglycerol synthase domain-containing protein
            [Arthrobacter sp. Y81].
ACCESSION   WP_258073867
VERSION     WP_258073867.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. Y81
  ORGANISM  Arthrobacter sp. Y81
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 422)
  AUTHORS   Petronikolou,N. and Nair,S.K.
  TITLE     Structural and Biochemical Studies of a Biocatalyst for the
            Enzymatic Production of Wax Esters
  JOURNAL   ACS Catal 8 (7), 6334-6344 (2018)
   PUBMED   31559109
REFERENCE   2  (residues 1 to 422)
  AUTHORS   Kalscheuer,R. and Steinbuchel,A.
  TITLE     A novel bifunctional wax ester synthase/acyl-CoA:diacylglycerol
            acyltransferase mediates wax ester and triacylglycerol biosynthesis
            in Acinetobacter calcoaceticus ADP1
  JOURNAL   J Biol Chem 278 (10), 8075-8082 (2003)
   PUBMED   12502715
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014998.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03007.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Arthrobacter sp. Y81"
                     /db_xref="taxon:2058897"
     Protein         1..422
                     /product="wax ester/triacylglycerol synthase
                     domain-containing protein"
                     /GO_function="GO:0004144 - diacylglycerol
                     O-acyltransferase activity [Evidence IEA]"
                     /GO_process="GO:0045017 - glycerolipid biosynthetic
                     process [Evidence IEA]"
                     /calculated_mol_wt=44713
     Region          42..420
                     /region_name="acyl_WS_DGAT"
                     /note="acyltransferase, WS/DGAT/MGAT; TIGR02946"
                     /db_xref="CDD:274360"
ORIGIN      
        1 mrpathrlaa vdeanlvldh agqvnvflva glltaggfvg pdgmpdlaal raslreriat
       61 lpqlrkiava tgrrhrwvea apdlehhirl ieavdglagf eqtcgelmsa tlgldrpywe
      121 ilvvpgatvg gigvvlrihh avadgmaasa ivqqlfdpve srgtsahvpr alvprqaprr
      181 dlrhvlgrlg fglrrmrmtl sgrevgptvl lgersprrgv vfldadlaal ethvrpvgat
      241 vndallaava lgyravlpaa gepiparlpv svpvalqrrg tagnqvgvml vrlplgdvep
      301 dervrliaeq treekarare qgtlefmrgp igarimdrva rrqhlvagfv tnvpgpvgtf
      361 rlagapvvai wpvavlaanv rlgvaavsya grlhcgihfd aenvpgaafa ramgeglarl
      421 ga
//
LOCUS       WP_258073918             200 aa            linear   BCT 02-MAR-2025
DEFINITION  LysE/ArgO family amino acid transporter [Arthrobacter sp. Y81].
ACCESSION   WP_258073918
VERSION     WP_258073918.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. Y81
  ORGANISM  Arthrobacter sp. Y81
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 200)
  AUTHORS   Vrljic,M., Garg,J., Bellmann,A., Wachi,S., Freudl,R., Malecki,M.J.,
            Sahm,H., Kozina,V.J., Eggeling,L., Saier,M.H. Jr., Eggeling,L. and
            Saier,M.H. Jr.
  TITLE     The LysE superfamily: topology of the lysine exporter LysE of
            Corynebacterium glutamicum, a paradyme for a novel superfamily of
            transmembrane solute translocators
  JOURNAL   J Mol Microbiol Biotechnol 1 (2), 327-336 (1999)
   PUBMED   10943564
REFERENCE   2  (residues 1 to 200)
  AUTHORS   Zakataeva,N.P., Aleshin,V.V., Tokmakova,I.L., Troshin,P.V. and
            Livshits,V.A.
  TITLE     The novel transmembrane Escherichia coli proteins involved in the
            amino acid efflux
  JOURNAL   FEBS Lett 452 (3), 228-232 (1999)
   PUBMED   10386596
REFERENCE   3  (residues 1 to 200)
  AUTHORS   Aleshin,V.V., Zakataeva,N.P. and Livshits,V.A.
  TITLE     A new family of amino-acid-efflux proteins
  JOURNAL   Trends Biochem Sci 24 (4), 133-135 (1999)
   PUBMED   10322417
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10003422
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Arthrobacter sp. Y81"
                     /db_xref="taxon:2058897"
     Protein         1..200
                     /product="LysE/ArgO family amino acid transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015171 - amino acid transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /calculated_mol_wt=20528
     Region          1..200
                     /region_name="ArgO"
                     /note="Arginine exporter protein ArgO [Amino acid
                     transport and metabolism]; COG1279"
                     /db_xref="CDD:440890"
ORIGIN      
        1 milpllsgla sglslivaig aqnafvlrhg lqrshvalvi avcavsdlvl illgvagigv
       61 vieqapaale avrwagaafl aaygafaawr airgqalgql gtgqavswva vlgtglaftw
      121 lnphvyldtv lllgslasth gpdgrwwfaa gaglasiawf talgvgarfl apvfrrrsaw
      181 rvldaviaav mvtmaislva
//
LOCUS       WP_258073941             260 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6390 family protein [Arthrobacter sp. Y81].
ACCESSION   WP_258073941
VERSION     WP_258073941.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. Y81
  ORGANISM  Arthrobacter sp. Y81
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 260)
  AUTHORS   Shao,L., Zi,J., Zeng,J. and Zhan,J.
  TITLE     Identification of the herboxidiene biosynthetic gene cluster in
            Streptomyces chromofuscus ATCC 49982
  JOURNAL   Appl Environ Microbiol 78 (6), 2034-2038 (2012)
   PUBMED   22247174
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040399.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19927.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Arthrobacter sp. Y81"
                     /db_xref="taxon:2058897"
     Protein         1..260
                     /product="DUF6390 family protein"
                     /calculated_mol_wt=28369
     Region          2..250
                     /region_name="DUF6390"
                     /note="Family of unknown function (DUF6390); pfam19927"
                     /db_xref="CDD:466235"
ORIGIN      
        1 mmvvdgaqlf vryayppnsr gscgppdsda llhygqsrvt dqglrelakg fagawpylel
       61 iagsngitdp ldarvveayw vgnslldsvg itnignsmed rfrartgrqf phlaegvlag
      121 gvphhsfhvf eiypwlgllh ddrrhataln vldrcrirwg evlavtgdda vvrsrplvwd
      181 gaslavgepv vetakhavng tgfvdglapg dvvslhwnwv cdrlsthqlq rlqhftarhl
      241 rianngvehr gaaialerhg
//
LOCUS       WP_258073961             537 aa            linear   BCT 02-MAR-2025
DEFINITION  GMC oxidoreductase [Arthrobacter sp. Y81].
ACCESSION   WP_258073961
VERSION     WP_258073961.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. Y81
  ORGANISM  Arthrobacter sp. Y81
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05199.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Arthrobacter sp. Y81"
                     /db_xref="taxon:2058897"
     Protein         1..537
                     /product="GMC oxidoreductase"
                     /GO_function="GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /calculated_mol_wt=58397
     Region          31..523
                     /region_name="BetA"
                     /note="Choline dehydrogenase or related flavoprotein
                     [Lipid transport and metabolism, General function
                     prediction only]; COG2303"
                     /db_xref="CDD:441878"
ORIGIN      
        1 mntvsrttid eaprpeapae pvlpdevirt diaiigsgms ggtmayalkd sgakvliier
       61 ghrlpaepqn sdldevylkg ryknadtwyn grtgeafkpg vyywvggctk vygaclprfr
      121 asdfeetthq dgtspawpfs yedlepyyar aeklfrvrgq igedptepah seaypfpald
      181 hepviqdlag sfrrqglhpf rmangldadt pekralcats dgapneaglk sdaekiaidp
      241 alaagvglmt gtkvfrlipg pdgrtivaal aerddqviri eadkfilaag avnsaalllg
      301 satpefprgl anssglvgrn ymvhnstffi ginpfrvnpt lwqktlglnd wyeagptnky
      361 plgnlqmlgk lrasmlkmar pwapswllka lsdrsidiyl ttedlprknn gislvngnih
      421 vwwepnnlgp hkelvrrigk avrkagypvi fsermgietn shqcgtavag hdpassvlrp
      481 dcrahdldnl wivdssffps saalnpalti aanalrvadt ilatrdpgvq rlsagkd
//
LOCUS       WP_258073987             109 aa            linear   BCT 02-MAR-2025
DEFINITION  TetR family transcriptional regulator C-terminal domain-containing
            protein [Arthrobacter sp. Y81].
ACCESSION   WP_258073987
VERSION     WP_258073987.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. Y81
  ORGANISM  Arthrobacter sp. Y81
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 109)
  AUTHORS   Ramos,J.L., Martinez-Bueno,M., Molina-Henares,A.J., Teran,W.,
            Watanabe,K., Zhang,X., Gallegos,M.T., Brennan,R. and Tobes,R.
  TITLE     The TetR family of transcriptional repressors
  JOURNAL   Microbiol Mol Biol Rev 69 (2), 326-356 (2005)
   PUBMED   15944459
REFERENCE   2  (residues 1 to 109)
  AUTHORS   Kunin,C.M., Hua,T.H., Van Arsdale White,L. and Villarejo,M.
  TITLE     Growth of Escherichia coli in human urine: role of salt tolerance
            and accumulation of glycine betaine
  JOURNAL   J Infect Dis 166 (6), 1311-1315 (1992)
   PUBMED   1431248
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025343.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13977.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Arthrobacter sp. Y81"
                     /db_xref="taxon:2058897"
     Protein         1..109
                     /product="TetR family transcriptional regulator C-terminal
                     domain-containing protein"
                     /calculated_mol_wt=11964
     Region          6..75
                     /region_name="TetR_C_17"
                     /note="Tetracyclin repressor-like, C-terminal domain;
                     pfam17922"
                     /db_xref="CDD:436144"
ORIGIN      
        1 meddasrily eywshslrna elrriqeeft raqqssyegi iaegiaagef hpvlepadia
       61 riivaqedgl vmdvlsgvas srdvfelnar laavllavdp arllepart
//
LOCUS       WP_258074013             443 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Arthrobacter sp. Y81].
ACCESSION   WP_258074013
VERSION     WP_258074013.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. Y81
  ORGANISM  Arthrobacter sp. Y81
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Arthrobacter sp. Y81"
                     /db_xref="taxon:2058897"
     Protein         1..443
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=47577
     Region          47..419
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mkhqdfgsth lnrrqlllsg galfgglala ggltgcggaa qaaaddirfw hllsggdgik
       61 mmamidkana dhtdfrikpt vlawgapyyt klamasaggr ppevaimhaa rvpgyapggl
      121 ldawdldlla efgvrpedfg priweksqfn gkvfslalds hpfvmlyntd vagkagvlgn
      181 dgklasissp sqflevsrel qrvtgrhgls ygylgdgaqm wrlfytlyrq hgadfvldpg
      241 kpaqverdva idclefiksl ldntistrsg dggtaiaefa sqgsgllftg vwelptmkta
      301 gvplgastip tlfgtpaafa dshsfvlphq akldeskrrg vyqfvasmlk gslswaeagh
      361 ipayqpvvks reyaaldpqa dyanaadiin ydpeawftgs gsdfqsyfae nvqnvflgrd
      421 katdgwdafm krinavlamp npv
//
LOCUS       WP_258073817            1612 aa            linear   BCT 02-MAR-2025
DEFINITION  peroxidase family protein [Arthrobacter sp. Y81].
ACCESSION   WP_258073817
VERSION     WP_258073817.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. Y81
  ORGANISM  Arthrobacter sp. Y81
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 1612)
  AUTHORS   Konstandi,O.A., Papassideri,I.S., Stravopodis,D.J., Kenoutis,C.A.,
            Hasan,Z., Katsorchis,T., Wever,R. and Margaritis,L.H.
  TITLE     The enzymatic component of Drosophila melanogaster chorion is the
            Pxd peroxidase
  JOURNAL   Insect Biochem Mol Biol 35 (9), 1043-1057 (2005)
   PUBMED   15979004
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015083.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03098.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Arthrobacter sp. Y81"
                     /db_xref="taxon:2058897"
     Protein         1..1612
                     /product="peroxidase family protein"
                     /calculated_mol_wt=170990
     Region          208..853
                     /region_name="An_peroxidase_bacterial_2"
                     /note="Uncharacterized bacterial family of heme
                     peroxidases; cd09821"
                     /db_xref="CDD:188653"
     Site            order(470..471,569,572..574,576,579,606,644,655,658,662)
                     /site_type="other"
                     /note="putative heme binding site [chemical binding]"
                     /db_xref="CDD:188653"
     Site            order(535,538..539,543,568,572,574,787,791,795..796,
                     799..800,803)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:188653"
     Region          <884..1047
                     /region_name="COG2931"
                     /note="Ca2+-binding protein, RTX toxin-related [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:442175"
     Region          892..>1335
                     /region_name="AidA"
                     /note="Autotransporter adhesin AidA [Cell
                     wall/membrane/envelope biogenesis, Intracellular
                     trafficking, secretion, and vesicular transport]; COG3468"
                     /db_xref="CDD:442691"
     Region          <1307..1562
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          1319..1408
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(1319,1381,1396)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(1397..1398,1400..1401)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          1554..1599
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
ORIGIN      
        1 mlhtqgsaag vtrkvtagvl alligagvvp svlapavsaa ptgqgftlna gdmrfilkqi
       61 kiaennatre daqgndvpgq pllgnganqi aspllpyglr tvdgtdnnlv agqgdygsas
      121 refprlsdpe wrtssggqsy esvntnvtdn gprfvsnviv dqtvtnpaav aaagkahrtv
      181 ndsptavpcv segvpencvp agetldipnv ttdfglsppy ngmfalfgqf fdhgvdftkk
      241 tknyvmmpls pddplyvpgg rtnfmllnra enqpgpdgvl gtaddeqngt ntdspwvdqs
      301 qtysshsshq vflrdytlne ngdpvstgel iegapggmat wadikehart mlglelsdvd
      361 vadipklatd qygrflrgpn glpqyetatg rvegnlaapv appanverig iaflddiaht
      421 aapfnsqtga pqqpdgdgdv ndvnvprpag qyddemldkh fvagdgrvne nigltaihqv
      481 fhsehnrlvg ymeelvtsln ldlnewklan gewngerlfq aaryvtemey qhivfedfar
      541 kiqpgingfn vftqsdtgid paiqaefaha tyrfghsmlt etvdrktndg tdigmpllda
      601 flnppayyss pngtltpeqa agaiamgmtd qvgaeldefv tdtlrnnvlg lpldlaslnl
      661 argretgvps lnnfrsqlya qtgesslkpy tswvdfgqnl khpdsvvnfm aaygthetit
      721 aatsiadkrl aaqrlfdmdi adpatpaday dfvnsagtwa aqssgldsvd lwvgglaeyq
      781 nlfggllgst fnyiferqmt dlqdgdrmyy lsrtsglnlr tqlegnslae limrntdasa
      841 lkadvfgvad cefelsrita stgnsvaddl asacdesall mrmsdgtiry rvsntvdrag
      901 lnaqstfngt slgdriwggi dndtfwgndg ndiiegndga dsvlggdgnd ritdshgddv
      961 lkggngndai dsgpgldiim sgegddfsng glngnetfag egndlvlsgd gpdavfgggg
     1021 ddwqeggnsn dllqgdsgap ffddinapgh dvligdsged dydaeggddv lvagpgiern
     1081 hgvfgfdwvt harsverads dmrqiivdgp nalkdrfllv ealsgwdkdd vlrgddevps
     1141 qpntevnvdg ltneldaagi aringlaall pagattfgag niiiggsgsd eiwgngaddi
     1201 idgdkwlnvr lsvldaqgae trtvtsltel qadimagnid pgnvkivrei lsnpgesdid
     1261 tavfsgarde ydittadgvt tvahtggngd dgtdritnve rlrftdqtvn vtapvaqapg
     1321 apvigtavag dasatvafta ptggspaesf svevrtgstv vrtiddvpgn atshqvtglt
     1381 ngtaynfqvr aantagqspw saasnevtpr vpayvppavs pftdvptsht fyteiawlad
     1441 qgiskgwpga nntatfrpae nvnrdqmaaf lyrmsgttdy tapavspftd vptshtfyke
     1501 iawladqgis ngwpgasnta tfrpaetinr dqmaaflyrm sgttdytapa vspftdvats
     1561 htfykeiawl adqdisngwp gpdntatyra gekinrdqma aflyrmsnpt ag
//
LOCUS       WP_258074089              89 aa            linear   BCT 02-MAR-2025
DEFINITION  multicopper oxidase domain-containing protein [Arthrobacter sp.
            Y81].
ACCESSION   WP_258074089
VERSION     WP_258074089.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. Y81
  ORGANISM  Arthrobacter sp. Y81
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 89)
  AUTHORS   Page,C.C., Moser,C.C., Chen,X. and Dutton,P.L.
  TITLE     Natural engineering principles of electron tunnelling in biological
            oxidation-reduction
  JOURNAL   Nature 402 (6757), 47-52 (1999)
   PUBMED   10573417
REFERENCE   2  (residues 1 to 89)
  AUTHORS   Grossmann,J.G., Ingledew,W.J., Harvey,I., Strange,R.W. and
            Hasnain,S.S.
  TITLE     X-ray absorption studies and homology modeling define the
            structural features that specify the nature of the copper site in
            rusticyanin
  JOURNAL   Biochemistry 34 (26), 8406-8414 (1995)
   PUBMED   7599131
REFERENCE   3  (residues 1 to 89)
  AUTHORS   Messerschmidt,A., Ladenstein,R., Huber,R., Bolognesi,M.,
            Avigliano,L., Petruzzelli,R., Rossi,A. and Finazzi-Agro,A.
  TITLE     Refined crystal structure of ascorbate oxidase at 1.9 A resolution
  JOURNAL   J Mol Biol 224 (1), 179-205 (1992)
   PUBMED   1548698
REFERENCE   4  (residues 1 to 89)
  AUTHORS   Messerschmidt,A. and Huber,R.
  TITLE     The blue oxidases, ascorbate oxidase, laccase and ceruloplasmin.
            Modelling and structural relationships
  JOURNAL   Eur J Biochem 187 (2), 341-352 (1990)
   PUBMED   2404764
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019352.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07732.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Arthrobacter sp. Y81"
                     /db_xref="taxon:2058897"
     Protein         1..89
                     /product="multicopper oxidase domain-containing protein"
                     /GO_function="GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=9179
     Region          1..>69
                     /region_name="Cupredoxin"
                     /note="Cupredoxin superfamily; cl19115"
                     /db_xref="CDD:473140"
ORIGIN      
        1 mtaqagttdf tdagatetmg fngaflrptl raargekvav nvtnqlaept svhwhgmhlp
       61 aamdggphqf rtsnsrpags chcgisatk
//
LOCUS       WP_258074255             179 aa            linear   BCT 02-MAR-2025
DEFINITION  histidine kinase, partial [Arthrobacter sp. Y81].
ACCESSION   WP_258074255
VERSION     WP_258074255.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. Y81
  ORGANISM  Arthrobacter sp. Y81
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 179)
  AUTHORS   Grebe,T.W. and Stock,J.B.
  TITLE     The histidine protein kinase superfamily
  JOURNAL   Adv Microb Physiol 41, 139-227 (1999)
   PUBMED   10500846
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019350.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07730.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Arthrobacter sp. Y81"
                     /db_xref="taxon:2058897"
     Protein         <1..>179
                     /product="histidine kinase"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
     Region          59..>178
                     /region_name="ComP"
                     /note="Signal transduction histidine kinase ComP [Signal
                     transduction mechanisms]; COG4585"
                     /db_xref="CDD:443642"
ORIGIN      
        1 ylwlalvtvl wavlmvgsve fswlvfplff lhlhllprwa gvtavvvmta gvilaqwqat
       61 gaatpplpvi igpvfgaafs ivtskayrll yqegenqrra adelrrtrte laatqheagv
      121 laerarlare ihdtlaqgfs siilvsraar rslesadves tlesidmvea tasenlaea
//
LOCUS       WP_258074272             283 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein [Klebsiella
            pneumoniae].
ACCESSION   WP_258074272
VERSION     WP_258074272.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 283)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..283
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=31308
     Region          48..276
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mmaaigykre dkygfqsner ntmswkmtll sgmmvycsfs tltfateqnt lrigvnsgya
       61 pfevktndgk lsgldidign evckrlnvrc qwielnfdsl ipalqakkid vinsamnite
      121 krkqaiafta piyvvpiqmv akkdsalqpn aaslkgkrlg vqqgtsqedy akkywatagv
      181 niisypeqne vfmdlaagrl daalqetqta qddflkqpqg adftfvgqpl kddetlgkgt
      241 gfglrksdtt ltkqvdqtlt gmnvdgtlrq lsmkyfqqdi taq
//
LOCUS       WP_258074274             139 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY-family carbohydrate kinase, partial [Klebsiella pneumoniae].
ACCESSION   WP_258074274
VERSION     WP_258074274.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 139)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 139)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02782.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..139
                     /product="FGGY-family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <1..130
                     /region_name="XylB"
                     /note="Sugar (pentulose or hexulose) kinase [Carbohydrate
                     transport and metabolism]; COG1070"
                     /db_xref="CDD:440688"
ORIGIN      
        1 argifwgmth aslraqlgya vlegvsfgin dglqalkesg tpiaqcslvg ggarspfwaq
       61 lladilampv vthkggetgg algaarlacl aagkpiaavc ekpevwqtwr adpirhhilm
      121 qryaqfkaly lndlhyrqh
//
LOCUS       WP_258074350             207 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphoenolpyruvate-utilizing N-terminal domain-containing protein,
            partial [Klebsiella pneumoniae].
ACCESSION   WP_258074350
VERSION     WP_258074350.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017346.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05524.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..207
                     /product="phosphoenolpyruvate-utilizing N-terminal
                     domain-containing protein"
                     /GO_process="GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
     Region          <1..207
                     /region_name="PRK11377"
                     /note="dihydroxyacetone kinase subunit M; Provisional"
                     /db_xref="CDD:183108"
ORIGIN      
        1 laliqplrpa aadaareqqr lrqaidqtla dlialtelae nkfnadiaai faghhtlldd
       61 ddlfdaandr llteqcsaew awhqvlmels qqyrqlddpy lqaryidied ilqrtlrhlq
      121 gvqervptpg eptiiiadni ypstvlqlda sfvkglclrd gseqahgaii araagiawls
      181 qqgealnsvq pgetivldmr hqrlird
//
LOCUS       WP_258074447             180 aa            linear   BCT 02-MAR-2025
DEFINITION  multicopper oxidase domain-containing protein [Brevibacillus
            laterosporus].
ACCESSION   WP_258074447
VERSION     WP_258074447.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus laterosporus
  ORGANISM  Brevibacillus laterosporus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
REFERENCE   1  (residues 1 to 180)
  AUTHORS   Page,C.C., Moser,C.C., Chen,X. and Dutton,P.L.
  TITLE     Natural engineering principles of electron tunnelling in biological
            oxidation-reduction
  JOURNAL   Nature 402 (6757), 47-52 (1999)
   PUBMED   10573417
REFERENCE   2  (residues 1 to 180)
  AUTHORS   Grossmann,J.G., Ingledew,W.J., Harvey,I., Strange,R.W. and
            Hasnain,S.S.
  TITLE     X-ray absorption studies and homology modeling define the
            structural features that specify the nature of the copper site in
            rusticyanin
  JOURNAL   Biochemistry 34 (26), 8406-8414 (1995)
   PUBMED   7599131
REFERENCE   3  (residues 1 to 180)
  AUTHORS   Messerschmidt,A., Ladenstein,R., Huber,R., Bolognesi,M.,
            Avigliano,L., Petruzzelli,R., Rossi,A. and Finazzi-Agro,A.
  TITLE     Refined crystal structure of ascorbate oxidase at 1.9 A resolution
  JOURNAL   J Mol Biol 224 (1), 179-205 (1992)
   PUBMED   1548698
REFERENCE   4  (residues 1 to 180)
  AUTHORS   Messerschmidt,A. and Huber,R.
  TITLE     The blue oxidases, ascorbate oxidase, laccase and ceruloplasmin.
            Modelling and structural relationships
  JOURNAL   Eur J Biochem 187 (2), 341-352 (1990)
   PUBMED   2404764
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019352.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07732.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Brevibacillus laterosporus"
                     /db_xref="taxon:1465"
     Protein         1..180
                     /product="multicopper oxidase domain-containing protein"
                     /GO_function="GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=20932
     Region          30..167
                     /region_name="CuRO_1_BOD_CotA_like"
                     /note="The first Cupredoxin domain of Bilirubin oxidase
                     (BOD), the bacterial endospore coat component CotA, and
                     similar proteins; cd13844"
                     /db_xref="CDD:259913"
     Site            order(30..31,33,71,73,75,103,115..116,120,122..124,126,
                     140..142,144,160,164,167)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:259913"
     Site            order(107,109..115,118,120..122,144,153,155,157,159,
                     165..166)
                     /site_type="other"
                     /note="Domain 3 interface [polypeptide binding]"
                     /db_xref="CDD:259913"
ORIGIN      
        1 mpekiklqkf ldklpipktl spikrsndwt yyevtmkeft qklhrdlppt rlwgyegtyp
       61 gptfdvvqne tvfvkwmndl pknhflpidt tihgseitmp vgrtvvhlhg vttppnsdgy
      121 peawftrnfe qtgplfqrev yrypnidrav tiwyhdhtig nhkierlcgt rgilsdprqa
//
LOCUS       WP_258074470             590 aa            linear   BCT 02-MAR-2025
DEFINITION  LPD7 domain-containing protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_258074470
VERSION     WP_258074470.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 590)
  AUTHORS   Iyer,L.M., Burroughs,A.M., Anand,S., de Souza,R.F. and Aravind,L.
  TITLE     Polyvalent Proteins, a Pervasive Theme in the Intergenomic
            Biological Conflicts of Bacteriophages and Conjugative Elements
  JOURNAL   J Bacteriol 199 (15), e00245-17 (2017)
   PUBMED   28559295
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 590)
  AUTHORS   Maindola,P., Raina,R., Goyal,P., Atmakuri,K., Ojha,A., Gupta,S.,
            Christie,P.J., Iyer,L.M., Aravind,L. and Arockiasamy,A.
  TITLE     Multiple enzymatic activities of ParB/Srx superfamily mediate
            sexual conflict among conjugative plasmids
  JOURNAL   Nat Commun 5, 5322 (2014)
   PUBMED   25358815
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037421.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18821.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..590
                     /product="LPD7 domain-containing protein"
     Region          104..199
                     /region_name="LPD7"
                     /note="Large polyvalent protein-associated domain 7;
                     pfam18821"
                     /db_xref="CDD:465879"
ORIGIN      
        1 aaaepeyaap tdrdgddeks nsasdleaya ammafggett dtaqqkpegi apsepvanta
       61 paeneteekk kktneeleng irwatndnae tppkeridle gliarfgyra ekdytaytld
      121 gqdafydygs hlrmatpeas qsdemilaav ltadkqhhrg ieitgsdefk ervfnlisey
      181 nievkltnpe qrvkllelkk anetaketak envadskank qegvnekans svqqngmrwe
      241 esasvqpkkq nasdtqkedk aageswekgv ivahgrakye wkddesmnyf vtlknehgek
      301 tlwgkdlera vkdagvdter lvtvrklgfv dvevnapvrd esnkivryet iqtkrnewev
      361 kpvypqptag neqaykpsel vpydaatfqk lrttiqqitg vdlsreavpe kelywflpng
      421 kpapesmtkp tgyklpqesk tagtpllvap hkkgerpdyy lvesrkgfmq giakdkesge
      481 yhsvigkvnk ridkdgnwkt ymtlsainkn sesgivlhgy ghvdqggknl lykntianek
      541 qpqhlqpasd evknktvmkq lfhpsnaakr kdderreqth apvaksaprp
//
LOCUS       WP_258074319             474 aa            linear   BCT 02-MAR-2025
DEFINITION  D-glucuronyl C5-epimerase family protein [Brevibacillus
            laterosporus].
ACCESSION   WP_258074319
VERSION     WP_258074319.1
KEYWORDS    RefSeq.
SOURCE      Brevibacillus laterosporus
  ORGANISM  Brevibacillus laterosporus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Brevibacillus.
REFERENCE   1  (residues 1 to 474)
  AUTHORS   Li,J., Hagner-McWhirter,A., Kjellen,L., Palgi,J., Jalkanen,M. and
            Lindahl,U.
  TITLE     Biosynthesis of heparin/heparan sulfate. cDNA cloning and
            expression of D-glucuronyl C5-epimerase from bovine lung
  JOURNAL   J Biol Chem 272 (44), 28158-28163 (1997)
   PUBMED   9346972
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018378.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06662.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Brevibacillus laterosporus"
                     /db_xref="taxon:1465"
     Protein         1..474
                     /product="D-glucuronyl C5-epimerase family protein"
                     /calculated_mol_wt=55859
ORIGIN      
        1 mtkkkwiqal sgmllltcla pshhvkgvdq qqglhetyte qrtnqynlqk kqimfpnqdr
       61 ywieriqsrp gakqtkqkis lfipgtrgef rylasngavp kwtkttlqgn lpvhtgyimt
      121 dqysiilskp hiyiprthns ievvprnmnq ikiiakktyg gynvsiempv eshmygevwa
      181 lesfqplidw napnmeliwr sidfedrlrw swdgfydrtp ttyvptgpny fwrnpdnyfa
      241 tsfvitegsr aaqdlgwmml htilpnqnak gywptapkst wlwddyqida gfydtrfntd
      301 iaflllkayq syhderflqa smryaefflq hskqnhfqie rdgqvgilvs dyshekphqi
      361 thtslnhqlq einylyelyi qtkddrfkel aekmlwgikl trdawvmpds nlhyaympdg
      421 tmglkdypyl tyndlvvvqr vlliiqgwed pdlaylmqmk kqwmdannvt gyrk
//
LOCUS       WP_258074671             213 aa            linear   BCT 02-MAR-2025
DEFINITION  Gfo/Idh/MocA family oxidoreductase, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_258074671
VERSION     WP_258074671.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 213)
  AUTHORS   Kingston,R.L., Scopes,R.K. and Baker,E.N.
  TITLE     The structure of glucose-fructose oxidoreductase from Zymomonas
            mobilis: an osmoprotective periplasmic enzyme containing
            non-dissociable NADP
  JOURNAL   Structure 4 (12), 1413-1428 (1996)
   PUBMED   8994968
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014893.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02894.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..213
                     /product="Gfo/Idh/MocA family oxidoreductase"
     Region          12..212
                     /region_name="GFO_IDH_MocA_C"
                     /note="Oxidoreductase family, C-terminal alpha/beta
                     domain; cl21649"
                     /db_xref="CDD:451345"
ORIGIN      
        1 aqpveqenas trwrvdprfv gpsyvlgdla thplflvetm apqlkitrlm carqsfvksr
       61 aplednahvl meydngaigs lwssavncgs mhgqkvriig ekaslewwde qpnqlryeiq
      121 gepvrilerg mdyldplarq ddriggghpe glfeawsnly rrfaiamdaa drrdeallad
      181 fwypdaraga fgvrwvencv rsadngacwv dfr
//
LOCUS       WP_258073764              87 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleotide kinase domain-containing protein [Klebsiella
            pneumoniae].
ACCESSION   WP_258073764
VERSION     WP_258073764.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 87)
  AUTHORS   Lee,Y.J., Dai,N., Muller,S.I., Guan,C., Parker,M.J., Fraser,M.E.,
            Walsh,S.E., Sridar,J., Mulholland,A., Nayak,K., Sun,Z., Lin,Y.C.,
            Comb,D.G., Marks,K., Gonzalez,R., Dowling,D.P., Bandarian,V.,
            Saleh,L., Correa,I.R. and Weigele,P.R.
  TITLE     Pathways of thymidine hypermodification
  JOURNAL   Nucleic Acids Res 50 (6), 3001-3017 (2022)
   PUBMED   34522950
REFERENCE   2  (residues 1 to 87)
  AUTHORS   Lee,Y.J., Dai,N., Walsh,S.E., Muller,S., Fraser,M.E.,
            Kauffman,K.M., Guan,C., Correa,I.R. Jr. and Weigele,P.R.
  TITLE     Identification and biosynthesis of thymidine hypermodifications in
            the genomic DNA of widespread bacterial viruses
  JOURNAL   Proc Natl Acad Sci U S A 115 (14), E3116-E3125 (2018)
   PUBMED   29555775
REFERENCE   3  (residues 1 to 87)
  AUTHORS   Iyer,L.M., Zhang,D., Burroughs,A.M. and Aravind,L.
  TITLE     Computational identification of novel biochemical systems involved
            in oxidation, glycosylation and other complex modifications of
            bases in DNA
  JOURNAL   Nucleic Acids Res 41 (16), 7635-7655 (2013)
   PUBMED   23814188
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18723.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..87
                     /product="nucleotide kinase domain-containing protein"
                     /calculated_mol_wt=10476
     Region          19..>61
                     /region_name="aGPT-Pplase1"
                     /note="alpha-glutamyl/putrescinyl thymine
                     pyrophosphorylase clade 1; pfam18723"
                     /db_xref="CDD:436692"
ORIGIN      
        1 mkiktakpil neavirewfy hqrertsiyy kkeilnlppy wtedkilrny kfvntkrtwd
       61 ketklslipi lrsggpfrfd srccpii
//
LOCUS       WP_258074860             331 aa            linear   BCT 02-MAR-2025
DEFINITION  mannosyltransferase family protein [Brachyspira murdochii].
ACCESSION   WP_258074860
VERSION     WP_258074860.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira murdochii
  ORGANISM  Brachyspira murdochii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 331)
  AUTHORS   Kang,J.Y., Hong,Y., Ashida,H., Shishioh,N., Murakami,Y.,
            Morita,Y.S., Maeda,Y. and Kinoshita,T.
  TITLE     PIG-V involved in transferring the second mannose in
            glycosylphosphatidylinositol
  JOURNAL   J Biol Chem 280 (10), 9489-9497 (2005)
   PUBMED   15623507
REFERENCE   2  (residues 1 to 331)
  AUTHORS   Fabre,A.L., Orlean,P. and Taron,C.H.
  TITLE     Saccharomyces cerevisiae Ybr004c and its human homologue are
            required for addition of the second mannose during
            glycosylphosphatidylinositol precursor assembly
  JOURNAL   FEBS J 272 (5), 1160-1168 (2005)
   PUBMED   15720390
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016104.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04188.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Brachyspira murdochii"
                     /db_xref="taxon:84378"
     Protein         1..331
                     /product="mannosyltransferase family protein"
                     /GO_function="GO:0000009 - alpha-1,6-mannosyltransferase
                     activity [Evidence IEA]"
                     /GO_function="GO:0004376 - glycolipid mannosyltransferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006506 - GPI anchor biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=37623
     Region          33..>163
                     /region_name="PMT_2"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; cl21590"
                     /db_xref="CDD:473917"
     Region          <176..251
                     /region_name="B2-adapt-app_C"
                     /note="Beta2-adaptin appendage, C-terminal sub-domain;
                     cl07618"
                     /db_xref="CDD:471718"
ORIGIN      
        1 mlmlfigyhy lpkgqdiyen vhraldiifq fndagiypdi aqngysgsyy afaplyplai
       61 kylsplflgs yqwtgffisn isfifvmill fyylisyigk tasmyavisl ivypashyns
      121 igyteslyfl mvlisilsyk ngdymtasif cglsiltrit glallagygl dmlvnyikek
      181 nynketiill lkkgltflav vmaiyglwlv ymyaktdnaf yfleaqktws retpspliip
      241 fiiklfirif thpalrttle flcpmtmlif silsikkvpi yfsfssifai lmplstsstw
      301 sltrlpmaal aayafigiks ekvkylglyg s
//
LOCUS       WP_258074943             912 aa            linear   BCT 02-MAR-2025
DEFINITION  PD-(D/E)XK nuclease family protein [Brachyspira murdochii].
ACCESSION   WP_258074943
VERSION     WP_258074943.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira murdochii
  ORGANISM  Brachyspira murdochii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 912)
  AUTHORS   Kinch,L.N., Ginalski,K., Rychlewski,L. and Grishin,N.V.
  TITLE     Identification of novel restriction endonuclease-like fold families
            among hypothetical proteins
  JOURNAL   Nucleic Acids Res 33 (11), 3598-3605 (2005)
   PUBMED   15972856
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024117.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12705.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Brachyspira murdochii"
                     /db_xref="taxon:84378"
     Protein         1..912
                     /product="PD-(D/E)XK nuclease family protein"
                     /calculated_mol_wt=108924
     Region          53..899
                     /region_name="AddB"
                     /note="ATP-dependent helicase/DNAse subunit B
                     [Replication, recombination and repair]; COG3857"
                     /db_xref="CDD:443066"
ORIGIN      
        1 mlelilfpny kaknnylkdk fkkytmdisn yqilhryykd nkekffisyr idnqkqyide
       61 siaiinihni lneykynnkn sviakqnity elaytlykli eeitlakfyg fdlnkykelk
      121 eintvirhyk eynkqndlld efdifelfie aiknreldyl neynsiiiyg fekipplhli
      181 fleslkkyyn invkvelpyd mkkyfydyrs fyqgidnfdi stnsdfsksl idktnltkyk
      241 erikfisgfg akqevdtavd eiiklikngt plydigiifs diqkysdivs rrlkecsikf
      301 nerranfvwk vpiipvltsi fsildkynge lnidalikvl sssymknldg lnpynirdli
      361 ysydkydkyn sveiyskmaf ndfkdkiark fnnndtskti iefidllnil vskktykeig
      421 layinilkfl kigsmsydde yekeycnrdn ealaifidlv ltisyteeie tienesishf
      481 dfqtalnvll rdkslmdndd keisltvsnl ydarglrfkh lfilgmnndf inrrpnvffi
      541 seklresink dlkkhafntq hylsdisyal flnilsycye ethvyfsfrl kddngnlevp
      601 fyyledlyne myhndfkfdn lkengliyrk eyiqkennih tnkenlmslf fnhdaayyid
      661 nvksimnkvy hkrnkngyns fddkseeikt ffynifkspv svttlqsime csakffyssl
      721 yqkdsveakv qginhadkgi vyhkffqkfy edvkgksaif dcslkeeefn tycniadevv
      781 eehindmika yskkdleery fieyqldqni ikkealnvmh afirkeiitn kvkdmnegyh
      841 yipfdferri gfdekesviy kkgdftlkir gvidridfsy kddkykning vriadykgsp
      901 rtekkekkek qi
//
LOCUS       WP_258074928             439 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Brachyspira murdochii].
ACCESSION   WP_258074928
VERSION     WP_258074928.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira murdochii
  ORGANISM  Brachyspira murdochii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 439)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 439)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 439)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 439)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Brachyspira murdochii"
                     /db_xref="taxon:84378"
     Protein         1..439
                     /product="ATP-binding protein"
                     /calculated_mol_wt=50680
     Region          <31..151
                     /region_name="NUDIX_ADPRase_Nudt5_UGPPase_Nudt14"
                     /note="ADP-ribose pyrophosphatase, UDP-glucose
                     pyrophosphatase, and similar proteins; cd03424"
                     /db_xref="CDD:467530"
     Region          <173..432
                     /region_name="BaeS"
                     /note="Signal transduction histidine kinase [Signal
                     transduction mechanisms]; COG0642"
                     /db_xref="CDD:440407"
ORIGIN      
        1 mintfrpvvy yrekvmtgkk tedidehimn flefpagmle edemndkntn qgikkcaqre
       61 leeetgysvp lktinvlghr yysssgiite riniatcdit gitpkkeikt dgsvmeesie
      121 tffvpfdkam rwckegvikn agteiglhrl yfsimyehqk nhnlilqkrl htllneissl
      181 kksaehynrl irefkatvsh elrhpfteim gyinllkknn mpeekreeff nivsrsikkl
      241 ydtnnnliqi alkddeasky vsefdaeeel niiidgykfi ypkdikiein iekncrilig
      301 yherfrlime giisnafkft ksgtisinir tldtiekkel dfspdlfnyh tmkniipnei
      361 eitvkdtgkg ikpsklkkif ipfyqadsrf ereyggmgig lsvvkdlldt mqgtitidss
      421 egagtivklr mpfgipskn
//
LOCUS       WP_258075022             158 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA adenine methylase [Brachyspira murdochii].
ACCESSION   WP_258075022
VERSION     WP_258075022.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira murdochii
  ORGANISM  Brachyspira murdochii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014177.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02086.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Brachyspira murdochii"
                     /db_xref="taxon:84378"
     Protein         1..158
                     /product="DNA adenine methylase"
                     /GO_function="GO:0009007 - site-specific
                     DNA-methyltransferase (adenine-specific) activity
                     [Evidence IEA]"
                     /GO_process="GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /calculated_mol_wt=18347
     Region          19..>152
                     /region_name="COG3392"
                     /note="Adenine-specific DNA methylase [Replication,
                     recombination and repair]"
                     /db_xref="CDD:442619"
ORIGIN      
        1 mitnaeantk ekylkenlia yignkrrllp fieaailhil eedssiktal dlfagsgsvs
       61 rllktlnlev ysndweyysy ilnyahlsin ikdldnmfih tgglentinm instdyindn
      121 dryiskyyap sddnnpdlin erlfytqykc lknryykt
//
LOCUS       WP_258075064             232 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Brachyspira murdochii].
ACCESSION   WP_258075064
VERSION     WP_258075064.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira murdochii
  ORGANISM  Brachyspira murdochii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 232)
  AUTHORS   Gao,G., Nara,T., Nakajima-Shimada,J. and Aoki,T.
  TITLE     Novel organization and sequences of five genes encoding all six
            enzymes for de novo pyrimidine biosynthesis in Trypanosoma cruzi
  JOURNAL   J Mol Biol 285 (1), 149-161 (1999)
   PUBMED   9878395
REFERENCE   2  (residues 1 to 232)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
REFERENCE   3  (residues 1 to 232)
  AUTHORS   Nygaard,P., Duckert,P. and Saxild,H.H.
  TITLE     Role of adenine deaminase in purine salvage and nitrogen metabolism
            and characterization of the ade gene in Bacillus subtilis
  JOURNAL   J Bacteriol 178 (3), 846-853 (1996)
   PUBMED   8550522
REFERENCE   4  (residues 1 to 232)
  AUTHORS   Lollier,M., Jaquet,L., Nedeva,T., Lacroute,F., Potier,S. and
            Souciet,J.L.
  TITLE     As in Saccharomyces cerevisiae, aspartate transcarbamoylase is
            assembled on a multifunctional protein including a
            dihydroorotase-like cryptic domain in Schizosaccharomyces pombe
  JOURNAL   Curr Genet 28 (2), 138-149 (1995)
   PUBMED   8590465
REFERENCE   5  (residues 1 to 232)
  AUTHORS   Jabri,E., Carr,M.B., Hausinger,R.P. and Karplus,P.A.
  TITLE     The crystal structure of urease from Klebsiella aerogenes
  JOURNAL   Science 268 (5213), 998-1004 (1995)
   PUBMED   7754395
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01979.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Brachyspira murdochii"
                     /db_xref="taxon:84378"
     Protein         1..232
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=25847
     Region          <2..222
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
ORIGIN      
        1 mpdeykndra gyvnlicnem ipkivklgla efcdvfcenc glnmeeshni ldaarkhnlk
       61 lkihsdqlet sggsylaarf kavsaehlim addrcmdvik kqgviavllp nasfylgmpy
      121 ararymvekg ipiaiasdyn pgsstcfnmq fimklayliy rlkpeeilna stinaacain
      181 rgkeigtiev gkkadiiiwn tkklnfllyt ldnnlcsivf ksveiaysnt di
//
LOCUS       WP_258075073             106 aa            linear   BCT 02-MAR-2025
DEFINITION  HU family DNA-binding protein [Brachyspira murdochii].
ACCESSION   WP_258075073
VERSION     WP_258075073.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira murdochii
  ORGANISM  Brachyspira murdochii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 106)
  AUTHORS   Vis,H., Mariani,M., Vorgias,C.E., Wilson,K.S., Kaptein,R. and
            Boelens,R.
  TITLE     Solution structure of the HU protein from Bacillus
            stearothermophilus
  JOURNAL   J Mol Biol 254 (4), 692-703 (1995)
   PUBMED   7500343
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00216.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Brachyspira murdochii"
                     /db_xref="taxon:84378"
     Protein         1..106
                     /product="HU family DNA-binding protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0030527 - structural constituent of
                     chromatin [Evidence IEA]"
                     /calculated_mol_wt=12294
     Region          8..>51
                     /region_name="HU_IHF"
                     /note="DNA sequence specific (IHF) and non-specific (HU)
                     domains; cl00257"
                     /db_xref="CDD:444792"
ORIGIN      
        1 mfktnytlie nisnefnidk neinliikel fdkislsiin gnkfymdklg vistdedkni
       61 ffsnedesfn eslesidvks kelknillek siyksifkni kdiskk
//
LOCUS       WP_258075088             129 aa            linear   BCT 02-MAR-2025
DEFINITION  BatA domain-containing protein [Brachyspira murdochii].
ACCESSION   WP_258075088
VERSION     WP_258075088.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira murdochii
  ORGANISM  Brachyspira murdochii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 129)
  AUTHORS   Meuric,V., Gracieux,P., Tamanai-Shacoori,Z., Perez-Chaparro,J. and
            Bonnaure-Mallet,M.
  TITLE     Expression patterns of genes induced by oxidative stress in
            Porphyromonas gingivalis
  JOURNAL   Oral Microbiol Immunol 23 (4), 308-314 (2008)
   PUBMED   18582330
REFERENCE   2  (residues 1 to 129)
  AUTHORS   Tang,Y.P., Dallas,M.M. and Malamy,M.H.
  TITLE     Characterization of the Batl (Bacteroides aerotolerance) operon in
            Bacteroides fragilis: isolation of a B. fragilis mutant with
            reduced aerotolerance and impaired growth in in vivo model systems
  JOURNAL   Mol Microbiol 32 (1), 139-149 (1999)
   PUBMED   10216867
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019220.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07584.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Brachyspira murdochii"
                     /db_xref="taxon:84378"
     Protein         1..129
                     /product="BatA domain-containing protein"
                     /calculated_mol_wt=14707
     Region          3..>112
                     /region_name="PRK13685"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:184242"
     Region          84..>121
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
ORIGIN      
        1 mtfvspkflf llftlpiiif lyiqtrknhs ysvkhprvsm skvlksryyv kdipfaliil
       61 allfsiigla rpakvdhlsd ingegiyisl vvdvspsmma edmmptrlea skktmidfik
      121 ketliklvw
//
LOCUS       WP_258075134             440 aa            linear   BCT 02-MAR-2025
DEFINITION  Eco57I restriction-modification methylase domain-containing protein
            [Brachyspira murdochii].
ACCESSION   WP_258075134
VERSION     WP_258075134.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira murdochii
  ORGANISM  Brachyspira murdochii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 440)
  AUTHORS   Schluckebier,G., Kozak,M., Bleimling,N., Weinhold,E. and Saenger,W.
  TITLE     Differential binding of S-adenosylmethionine S-adenosylhomocysteine
            and Sinefungin to the adenine-specific DNA methyltransferase M.TaqI
  JOURNAL   J Mol Biol 265 (1), 56-67 (1997)
   PUBMED   8995524
REFERENCE   2  (residues 1 to 440)
  AUTHORS   Janulaitis,A., Vaisvila,R., Timinskas,A., Klimasauskas,S. and
            Butkus,V.
  TITLE     Cloning and sequence analysis of the genes coding for Eco57I type
            IV restriction-modification enzymes
  JOURNAL   Nucleic Acids Res 20 (22), 6051-6056 (1992)
   PUBMED   1334261
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019291.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07669.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Brachyspira murdochii"
                     /db_xref="taxon:84378"
     Protein         1..440
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=51974
     Region          <28..>103
                     /region_name="YeeA"
                     /note="Type II restriction/modification system,
                     endonuclease and methylase domains [Defense mechanisms];
                     COG1002"
                     /db_xref="CDD:440626"
     Region          <40..171
                     /region_name="HsdM"
                     /note="Type I restriction-modification system, DNA
                     methylase subunit [Defense mechanisms]; COG0286"
                     /db_xref="CDD:440055"
     Region          234..347
                     /region_name="TaqI_C"
                     /note="TaqI-like C-terminal specificity domain; pfam12950"
                     /db_xref="CDD:403989"
ORIGIN      
        1 mlqlvvgndf yesqsvldfd eetqykincf dwedefksvf kaggfdvvig nppyvrihll
       61 dkiqldyfkd rysvckgqid lyslfieksi sylsksngvv sfivprflkf nidseevrkl
      121 flkynikqlv evgkafknvs tecivflvsk ddkkedmkiy dyypnkdvtf iktmdknmfy
      181 nfpniifnti vseeeiniin kmlsisvkvs eicslkrgme igkkdirenk sgiptllgee
      241 vskyqiayen tyclenhkev srlklfseve kilirrvanq liatydneny yfiknlysli
      301 skdynlkyil gllnskllnf ffkkyfttkk edifpeiqay hinelpiyki dldkkeekek
      361 ynkiielvds miilnkkils eknpnslnmi nrqisacekq lnlliyklyd lsennirtie
      421 ekitlcvyly ifflfiltkk
//
LOCUS       WP_258075172             127 aa            linear   BCT 02-MAR-2025
DEFINITION  glutathione S-transferase C-terminal domain-containing protein
            [Vibrio hyugaensis].
ACCESSION   WP_258075172
VERSION     WP_258075172.1
KEYWORDS    RefSeq.
SOURCE      Vibrio hyugaensis
  ORGANISM  Vibrio hyugaensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024802.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13410.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Vibrio hyugaensis"
                     /db_xref="taxon:1534743"
     Protein         1..127
                     /product="glutathione S-transferase C-terminal
                     domain-containing protein"
                     /calculated_mol_wt=14402
     Region          <5..>111
                     /region_name="ECM4"
                     /note="Glutathionyl-hydroquinone reductase [Energy
                     production and conversion]; COG0435"
                     /db_xref="CDD:440204"
ORIGIN      
        1 mamdlasrwl plaknpvelv paalreeies lnrwlhnnvn gkvyqvgfat tqaqydqase
       61 tlfdaleqld qrlgqsrylh gddvtlsdlf llptlvrfea vyevhfkank kvhrgfpgka
      121 afifkkk
//
LOCUS       WP_258075189             337 aa            linear   BCT 02-MAR-2025
DEFINITION  OmpA family protein [Vibrio hyugaensis].
ACCESSION   WP_258075189
VERSION     WP_258075189.1
KEYWORDS    RefSeq.
SOURCE      Vibrio hyugaensis
  ORGANISM  Vibrio hyugaensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012894.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00691.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Vibrio hyugaensis"
                     /db_xref="taxon:1534743"
     Protein         1..337
                     /product="OmpA family protein"
                     /calculated_mol_wt=36821
     Region          32..334
                     /region_name="PRK10808"
                     /note="outer membrane protein A; Reviewed"
                     /db_xref="CDD:236764"
ORIGIN      
        1 miqtfpalaa ekqvsaledv svlssqtsth fylggrlgws vfkdacgrea nacndqtfga
       61 glyggyqfnd wfaleggvtd ygkpdaryda gsvsadtfga elsaklsysl spkwslfgrl
      121 ggayqdiekv sdnskkqssq dwntlvalgv nyrlspqwsl rseyqfidgi gdsralqsdl
      181 hftslgltyh fgqhtptlnt sstpapspel pqtvvienvp vkinilfafd sshmqssdel
      241 dqlvtefkkg klgqvfitgh sdnrgtkvyn qalserraka vaeylvengv aseklivlgl
      301 geskpvmsna tqdgqaknrr vevhfetqee rvqesam
//
LOCUS       WP_258075211             145 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase large subunit domain-containing protein, partial
            [Brachyspira murdochii].
ACCESSION   WP_258075211
VERSION     WP_258075211.1
KEYWORDS    RefSeq.
SOURCE      Brachyspira murdochii
  ORGANISM  Brachyspira murdochii
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (residues 1 to 145)
  AUTHORS   Xu,R.G., Jenkins,H.T., Chechik,M., Blagova,E.V., Lopatina,A.,
            Klimuk,E., Minakhin,L., Severinov,K., Greive,S.J. and Antson,A.A.
  TITLE     Viral genome packaging terminase cleaves DNA using the canonical
            RuvC-like two-metal catalysis mechanism
  JOURNAL   Nucleic Acids Res 45 (6), 3580-3590 (2017)
   PUBMED   28100693
REFERENCE   2  (residues 1 to 145)
  AUTHORS   Hilbert,B.J., Hayes,J.A., Stone,N.P., Duffy,C.M., Sankaran,B. and
            Kelch,B.A.
  TITLE     Structure and mechanism of the ATPase that powers viral genome
            packaging
  JOURNAL   Proc Natl Acad Sci U S A 112 (29), E3792-E3799 (2015)
   PUBMED   26150523
REFERENCE   3  (residues 1 to 145)
  AUTHORS   Schouler,C., Ehrlich,S.D. and Chopin,M.C.
  TITLE     Sequence and organization of the lactococcal prolate-headed bIL67
            phage genome
  JOURNAL   Microbiology (Reading) 140 (Pt 11), 3061-3069 (1994)
   PUBMED   7812447
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015321.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03354.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Brachyspira murdochii"
                     /db_xref="taxon:84378"
     Protein         1..>145
                     /product="terminase large subunit domain-containing
                     protein"
     Region          5..>145
                     /region_name="YmfN"
                     /note="Phage terminase-like protein, large subunit,
                     contains N-terminal HTH domain [Mobilome: prophages,
                     transposons]; COG4626"
                     /db_xref="CDD:443665"
ORIGIN      
        1 mytynqyidd vinkklpvcq aaflsvkrhl ddieksknnd ypfyfdenea krpitfiqsl
       61 vhtkgewanh niilesweqf iiasifgwrr kennlrrfkk ayvqvsrkng kttfasgign
      121 ycffcdspae agveiyyiat kkdqa
//
LOCUS       WP_258075260              78 aa            linear   BCT 02-MAR-2025
DEFINITION  HAD hydrolase-like protein [Vibrio hyugaensis].
ACCESSION   WP_258075260
VERSION     WP_258075260.1
KEYWORDS    RefSeq.
SOURCE      Vibrio hyugaensis
  ORGANISM  Vibrio hyugaensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024811.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13419.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Vibrio hyugaensis"
                     /db_xref="taxon:1534743"
     Protein         1..78
                     /product="HAD hydrolase-like protein"
                     /calculated_mol_wt=8850
     Region          1..>54
                     /region_name="YcjU"
                     /note="Beta-phosphoglucomutase, HAD superfamily
                     [Carbohydrate transport and metabolism]; COG0637"
                     /db_xref="CDD:440402"
ORIGIN      
        1 mlkavlfdmd glifdtesiy kqswqyaate qgltitddfy qqfigvqtln vreyslsift
       61 mlsichaikp cemntsii
//
LOCUS       WP_258075261             349 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Burkholderia pseudomallei].
ACCESSION   WP_258075261
VERSION     WP_258075261.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14559.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..349
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=34767
     Region          37..66
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276808"
     Region          44..>232
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          71..115
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276808"
     Region          172..199
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276808"
ORIGIN      
        1 mpvalllaal laallagcas hgvfqprpvl sqrgtvgdgd lsvaesalaa gdaelaatlf
       61 eralkadprs lpaqvglgda myqtgelara gvlyaqaaaa apddpraqlg larvalrerh
      121 lddalaryak lnaarpdnia aaaglgtvld llgrhddaqr vyraalarhp dahalktdlg
      181 lslvladrar eganvlldia glsnapaqar edlalaygml gnddaakril vhdlpaasae
      241 dnlrfyrnvr arraagaggg gapgpagaag aanaanatna tnaanaanaa naanaanaan
      301 aanaaagptm ttaanaprae haaaapqapy agraiadagl apvrvevvk
//
LOCUS       WP_258075298             315 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Burkholderia
            pseudomallei].
ACCESSION   WP_258075298
VERSION     WP_258075298.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 315)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>315
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          110..>315
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mtandllall nskgialsvk gdnlaitgde kvledpglla llrankpali dlikdghgtv
       61 ggavrvppnr ipadaeriap eqltlvrldq geidalvacv dggaanvqdi yplvpmqegm
      121 lfhhllsqqg daylesylla frtrerldrf lsalqqvidr hdilrtaffw eglphsvqvv
      181 qrratlplnv veldprdgdv gqqlearydp rshridvgra plmqvhaahd aaggrwlvrl
      241 lshhlavdht tlervieear aieqgraedl prpepfrnfv aqarlgvsea dheayfrakl
      301 gdideptapf gllsv
//
LOCUS       WP_258075313              71 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Burkholderia pseudomallei].
ACCESSION   WP_258075313
VERSION     WP_258075313.1
KEYWORDS    RefSeq.
SOURCE      Burkholderia pseudomallei
  ORGANISM  Burkholderia pseudomallei
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
            group.
REFERENCE   1  (residues 1 to 71)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Burkholderia pseudomallei"
                     /db_xref="taxon:28450"
     Protein         1..>71
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          1..>71
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 makekfertk phvnvgtigh vdhgkttlta aiatvlsakf ggeakkydei daapeekarg
       61 itintahiey e
//
LOCUS       WP_258075421             318 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF998 domain-containing protein [Rathayibacter sp. AY1E3].
ACCESSION   WP_258075421
VERSION     WP_258075421.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1E3
  ORGANISM  Rathayibacter sp. AY1E3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017959.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06197.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Rathayibacter sp. AY1E3"
                     /db_xref="taxon:2080551"
     Protein         1..318
                     /product="DUF998 domain-containing protein"
                     /calculated_mol_wt=32876
     Region          3..211
                     /region_name="DUF998"
                     /note="Protein of unknown function (DUF998); cl21592"
                     /db_xref="CDD:473918"
     Region          <217..311
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mgtrgagvlw vvsalayvga eavaasafpg ysyarnyisd lgvpevgvfq graidsplha
       61 vmnagfllqg alylaaavtt vraarggsrg lflslavvya vgiavvglvh gssasaqngi
      121 gglhvvgaam aivggnaasi vagaaarrgr apwaletvgi vlgaagllal lmlqvdtrvp
      181 gvdllpdgvw erasvyavta wqlatglrll rqpevprqpr ppqtagggaq vrsavhrlfq
      241 lgiripeals vvvfddnpws elvtpplsvv rqpidmlarh svelvlarmq grlpeapqhi
      301 evqadlvirs scaapprr
//
LOCUS       WP_258075487             339 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Legionella pneumophila].
ACCESSION   WP_258075487
VERSION     WP_258075487.1
KEYWORDS    RefSeq.
SOURCE      Legionella pneumophila
  ORGANISM  Legionella pneumophila
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (residues 1 to 339)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 339)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Legionella pneumophila"
                     /db_xref="taxon:446"
     Protein         1..339
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=38807
     Region          6..110
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Region          252..338
                     /region_name="RimI"
                     /note="Ribosomal protein S18 acetylase RimI and related
                     acetyltransferases [Translation, ribosomal structure and
                     biogenesis]; COG0456"
                     /db_xref="CDD:440224"
ORIGIN      
        1 mtqlyfigga sgsgktavmp ylkevlsehf avydfddigv pegadkkwrq esteiwikkl
       61 lsegkdacll gqmvlgeilg spsarqidki hfclldvsdf eriqrlekrn tygadqnmln
      121 wsawlrmhhq dpkwavqviq esaasimdfg rfnqlanysd sanvlildtt dlslkelawk
      181 iaewikstrs ahietyvpnt nyklelnakn sfkivdqklf efnkscvpst qqpelidinl
      241 tikdadevia gicseaytwn ilyisvffve ekyrnqglgt illkkveeea krlgvtlihl
      301 dtfefqakdf ylkhgyevfg ilndcpkghk ryymkkvlc
//
LOCUS       WP_258075265             321 aa            linear   BCT 02-MAR-2025
DEFINITION  Solitary outer membrane autotransporter beta-barrel domain [Vibrio
            sp. MMG023].
ACCESSION   WP_258075265
VERSION     WP_258075265.1
KEYWORDS    RefSeq.
SOURCE      Vibrio sp. MMG023
  ORGANISM  Vibrio sp. MMG023
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 321)
  AUTHORS   Prakash,A., Yogeeshwari,S., Sircar,S. and Agrawal,S.
  TITLE     Protein domain of unknown function 3233 is a translocation domain
            of autotransporter secretory mechanism in gamma proteobacteria
  JOURNAL   PLoS One 6 (11), e25570 (2011)
   PUBMED   22073138
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022990.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11557.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Vibrio sp. MMG023"
                     /db_xref="taxon:2909979"
     Protein         1..321
                     /product="Solitary outer membrane autotransporter
                     beta-barrel domain"
                     /calculated_mol_wt=36255
     Region          8..320
                     /region_name="Omp_AT"
                     /note="Solitary outer membrane autotransporter beta-barrel
                     domain; pfam11557"
                     /db_xref="CDD:371601"
ORIGIN      
        1 miivtmslis sfchanpvqq tlqkefernf aigivlsdsd vftlgfhdfd pnkylnidne
       61 digtqdsvdl rkqvalstlp yhlslsedkt apvkynlkgr lyalgidqdv tvnedkvpdr
      121 nkelilgsyt eieqqnqlte hlslsgaaga hlmyyrneys yrsdaldnlk pyiegvylnt
      181 dawalvgevn aelkylenen wgkwyvwssp hyfygmgwge gnngdignpe gwywvngvkl
      241 fyditkvgrt vqsvytsfnr vdvggdtskp mntshyyeas fgwlmtppfk sewidniglg
      301 lsvnygsalk ggslvlffnq e
//
LOCUS       WP_258075523             382 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Marinobacter persicus].
ACCESSION   WP_258075523
VERSION     WP_258075523.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter persicus
  ORGANISM  Marinobacter persicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (residues 1 to 382)
  AUTHORS   Mande,S.S., Sarfaty,S., Allen,M.D., Perham,R.N. and Hol,W.G.
  TITLE     Protein-protein interactions in the pyruvate dehydrogenase
            multienzyme complex: dihydrolipoamide dehydrogenase complexed with
            the binding domain of dihydrolipoamide acetyltransferase
  JOURNAL   Structure 4 (3), 277-286 (1996)
   PUBMED   8805537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07992.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Marinobacter persicus"
                     /db_xref="taxon:930118"
     Protein         1..382
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=41405
     Region          18..379
                     /region_name="Pyr_redox_2"
                     /note="Pyridine nucleotide-disulphide oxidoreductase;
                     cl39093"
                     /db_xref="CDD:476868"
ORIGIN      
        1 mdhrywintv repplkrlvl lgaghahliv lrefaqsppp dtelvvisps rwqyysgmlp
       61 gwiaghyrle qcrievepqv saaggelild ravaldaear kirlhngrqv dydwlsidig
      121 sgsnladlkg yddplisvkp idrfqaqwre feeqcqttga ghlvvvggga agvelamaaa
      181 nvvrhnhqgg grvsliagds gplpgfnalm rrlagrklvr rrvtvieqra avrdgklqla
      241 dgtrlkagpv laatgaaaep flkdsglavd eegfvrvsac hqslshsnvf avgdtcsred
      301 galnrsgvha vkagpvlagn lrsalvgadl kpfrprrysl yllacgdqta igsygpltff
      361 grwvwrlkdr idrkfiegfs ag
//
LOCUS       WP_258075533             214 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Marinobacter persicus].
ACCESSION   WP_258075533
VERSION     WP_258075533.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter persicus
  ORGANISM  Marinobacter persicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (residues 1 to 214)
  AUTHORS   Ronning,D.R., Guynet,C., Ton-Hoang,B., Perez,Z.N., Ghirlando,R.,
            Chandler,M. and Dyda,F.
  TITLE     Active site sharing and subterminal hairpin recognition in a new
            class of DNA transposases
  JOURNAL   Mol Cell 20 (1), 143-154 (2005)
   PUBMED   16209952
REFERENCE   2  (residues 1 to 214)
  AUTHORS   Brynestad,S., Synstad,B. and Granum,P.E.
  TITLE     The Clostridium perfringens enterotoxin gene is on a transposable
            element in type A human food poisoning strains
  JOURNAL   Microbiology (Reading) 143 (Pt 7), 2109-2115 (1997)
   PUBMED   9245800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013921.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01797.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Marinobacter persicus"
                     /db_xref="taxon:930118"
     Protein         1..214
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=24881
     Region          1..134
                     /region_name="RAYT"
                     /note="REP element-mobilizing transposase RayT [Mobilome:
                     prophages, transposons]; COG1943"
                     /db_xref="CDD:441546"
ORIGIN      
        1 msrrtricpa gipqhviqrg dnrqtcfqgv sdratyymyl arhskafdld vhawvlmdnh
       61 ahllvtpntd nalfpfmkal sqsyaqyynt kynrtgklwe pryraclvdt apyflecqry
      121 ielnpvmgra vshpdsfqws sygshargmk trfhqphecy lalhaeesvr rlryqqfvsa
      181 kpptdmaeki rhalmsgwal gdaefrermr elgs
//
LOCUS       WP_258075537             150 aa            linear   BCT 02-MAR-2025
DEFINITION  PilZ domain-containing protein [Marinobacter persicus].
ACCESSION   WP_258075537
VERSION     WP_258075537.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter persicus
  ORGANISM  Marinobacter persicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (residues 1 to 150)
  AUTHORS   Galperin,M.Y. and Chou,S.H.
  TITLE     Structural Conservation and Diversity of PilZ-Related Domains
  JOURNAL   J Bacteriol 202 (4), e00664-19 (2020)
   PUBMED   31740493
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 150)
  AUTHORS   Paul,K., Nieto,V., Carlquist,W.C., Blair,D.F. and Harshey,R.M.
  TITLE     The c-di-GMP binding protein YcgR controls flagellar motor
            direction and speed to affect chemotaxis by a 'backstop brake'
            mechanism
  JOURNAL   Mol Cell 38 (1), 128-139 (2010)
   PUBMED   20346719
REFERENCE   3  (residues 1 to 150)
  AUTHORS   Benach,J., Swaminathan,S.S., Tamayo,R., Handelman,S.K.,
            Folta-Stogniew,E., Ramos,J.E., Forouhar,F., Neely,H.,
            Seetharaman,J., Camilli,A. and Hunt,J.F.
  TITLE     The structural basis of cyclic diguanylate signal transduction by
            PilZ domains
  JOURNAL   EMBO J 26 (24), 5153-5166 (2007)
   PUBMED   18034161
REFERENCE   4  (residues 1 to 150)
  AUTHORS   Ryjenkov,D.A., Simm,R., Romling,U. and Gomelsky,M.
  TITLE     The PilZ domain is a receptor for the second messenger c-di-GMP:
            the PilZ domain protein YcgR controls motility in enterobacteria
  JOURNAL   J Biol Chem 281 (41), 30310-30314 (2006)
   PUBMED   16920715
REFERENCE   5  (residues 1 to 150)
  AUTHORS   Amikam,D. and Galperin,M.Y.
  TITLE     PilZ domain is part of the bacterial c-di-GMP binding protein
  JOURNAL   Bioinformatics 22 (1), 3-6 (2006)
   PUBMED   16249258
REFERENCE   6  (residues 1 to 150)
  AUTHORS   Alm,R.A., Bodero,A.J., Free,P.D. and Mattick,J.S.
  TITLE     Identification of a novel gene, pilZ, essential for type 4 fimbrial
            biogenesis in Pseudomonas aeruginosa
  JOURNAL   J Bacteriol 178 (1), 46-53 (1996)
   PUBMED   8550441
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018894.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07238.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Marinobacter persicus"
                     /db_xref="taxon:930118"
     Protein         1..150
                     /product="PilZ domain-containing protein"
                     /GO_function="GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /calculated_mol_wt=16626
ORIGIN      
        1 mgkvasfetg hakrvrmkta ttrpnlrnqq rvdvelditl evpkgqcvnc qasnlsragm
       61 tlccnletvk qlipgmrppa pgswveikar fpvpvlktqp vtvladgniv nmrrisrdef
      121 elgvqfsefe gngfdyvdkc vsrllaeqkh
//
LOCUS       WP_258075538             185 aa            linear   BCT 02-MAR-2025
DEFINITION  putative metalloprotease CJM1_0395 family protein [Marinobacter
            persicus].
ACCESSION   WP_258075538
VERSION     WP_258075538.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter persicus
  ORGANISM  Marinobacter persicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (residues 1 to 185)
  AUTHORS   Lenart,A., Dudkiewicz,M., Grynberg,M. and Pawlowski,K.
  TITLE     CLCAs - a family of metalloproteases of intriguing phylogenetic
            distribution and with cases of substituted catalytic sites
  JOURNAL   PLoS One 8 (5), e62272 (2013)
   PUBMED   23671590
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023540.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12118.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Marinobacter persicus"
                     /db_xref="taxon:930118"
     Protein         1..185
                     /product="putative metalloprotease CJM1_0395 family
                     protein"
                     /calculated_mol_wt=19194
     Region          <5..176
                     /region_name="SprA-related"
                     /note="SprA-related family; pfam12118"
                     /db_xref="CDD:432342"
ORIGIN      
        1 mspsqqpass npsvtgekat eadtrsspav gqssennsan rateqssere rnsgqqsggq
       61 nltpeqlkel telkardrev raheaahqst ggqhagsmsl tyergpdgaq yavggevpid
      121 vspvagdpqa tiekmrvvrs aamapaqpss qdravaaqam qtmlqaqaem asgesqddng
      181 lsvfa
//
LOCUS       WP_258075615             174 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin cofactor-binding domain-containing protein
            [Marinobacter persicus].
ACCESSION   WP_258075615
VERSION     WP_258075615.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter persicus
  ORGANISM  Marinobacter persicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (residues 1 to 174)
  AUTHORS   Dobbek,H., Gremer,L., Meyer,O. and Huber,R.
  TITLE     Crystal structure and mechanism of CO dehydrogenase, a molybdo
            iron-sulfur flavoprotein containing S-selanylcysteine
  JOURNAL   Proc Natl Acad Sci U S A 96 (16), 8884-8889 (1999)
   PUBMED   10430865
REFERENCE   2  (residues 1 to 174)
  AUTHORS   Romao,M.J., Archer,M., Moura,I., Moura,J.J., LeGall,J., Engh,R.,
            Schneider,M., Hof,P. and Huber,R.
  TITLE     Crystal structure of the xanthine oxidase-related aldehyde
            oxido-reductase from D. gigas
  JOURNAL   Science 270 (5239), 1170-1176 (1995)
   PUBMED   7502041
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042649.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20256.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Marinobacter persicus"
                     /db_xref="taxon:930118"
     Protein         1..174
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /calculated_mol_wt=17823
     Region          24..>158
                     /region_name="MoCoBD_2"
                     /note="Molybdopterin cofactor-binding domain; pfam20256"
                     /db_xref="CDD:466407"
ORIGIN      
        1 mcrtsaagaa asaegdaaaf alnafvrvap dntvtvmikh iefgqgpatg lstlvaeeld
       61 adwgqmrael apadtekyvn hlfglqgtgg stamansyeq mrkagaaara mlvqaaanrw
      121 rvnadeitvs kgtvshaasg kslsfgdlag eaakleapad pklkspdqfn ligt
//
LOCUS       WP_258075645             349 aa            linear   BCT 02-MAR-2025
DEFINITION  MucB/RseB C-terminal domain-containing protein [Marinobacter
            persicus].
ACCESSION   WP_258075645
VERSION     WP_258075645.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter persicus
  ORGANISM  Marinobacter persicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (residues 1 to 349)
  AUTHORS   Kim,D.Y., Jin,K.S., Kwon,E., Ree,M. and Kim,K.K.
  TITLE     Crystal structure of RseB and a model of its binding mode to RseA
  JOURNAL   Proc Natl Acad Sci U S A 104 (21), 8779-8784 (2007)
   PUBMED   17496148
REFERENCE   2  (residues 1 to 349)
  AUTHORS   Martinez-Salazar,J.M., Moreno,S., Najera,R., Boucher,J.C.,
            Espin,G., Soberon-Chavez,G. and Deretic,V.
  TITLE     Characterization of the genes coding for the putative sigma factor
            AlgU and its regulators MucA, MucB, MucC, and MucD in Azotobacter
            vinelandii and evaluation of their roles in alginate biosynthesis
  JOURNAL   J Bacteriol 178 (7), 1800-1808 (1996)
   PUBMED   8606151
REFERENCE   3  (residues 1 to 349)
  AUTHORS   Martin,D.W., Schurr,M.J., Mudd,M.H. and Deretic,V.
  TITLE     Differentiation of Pseudomonas aeruginosa into the
            alginate-producing form: inactivation of mucB causes conversion to
            mucoidy
  JOURNAL   Mol Microbiol 9 (3), 497-506 (1993)
   PUBMED   8412698
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17188.9
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Marinobacter persicus"
                     /db_xref="taxon:930118"
     Protein         1..349
                     /product="MucB/RseB C-terminal domain-containing protein"
                     /calculated_mol_wt=38299
     Region          23..339
                     /region_name="RseB"
                     /note="negative regulator of sigma E activity [Signal
                     transduction mechanisms]; COG3026"
                     /db_xref="CDD:442262"
ORIGIN      
        1 mnrwaigkqi nlvgwtalal smllwvsvva apgayaaess petpetavdw lerlgpalnm
       61 tsykgvfvym rggqvhsmri ahrfregrve erlviqdggs geivrkgmdv vcvlpdqgrv
      121 rlddvipsgp faeafamqfm pvvqwytpel tgedrvagyd tvtvalrakd enrysyrlwl
      181 eqdtgllvks hvldtdgsvl eqfqftslei tdnipdrefe vqtegheisr tldgpennqs
      241 plprmngwtl dwrpegfmpa aaprsskgka vafsdgltaf svfvepagkl kmptgvsrvg
      301 attiylrqvd vvghpfliav vgeippktag klaeavrind dlalellgp
//
LOCUS       WP_258075681             330 aa            linear   BCT 02-MAR-2025
DEFINITION  type I restriction endonuclease [Marinobacter persicus].
ACCESSION   WP_258075681
VERSION     WP_258075681.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter persicus
  ORGANISM  Marinobacter persicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (residues 1 to 330)
  AUTHORS   Piekarowicz,A., Klyz,A., Kwiatek,A. and Stein,D.C.
  TITLE     Analysis of type I restriction modification systems in the
            Neisseriaceae: genetic organization and properties of the gene
            products
  JOURNAL   Mol Microbiol 41 (5), 1199-1210 (2001)
   PUBMED   11555298
REFERENCE   2  (residues 1 to 330)
  AUTHORS   Makovets,S., Doronina,V.A. and Murray,N.E.
  TITLE     Regulation of endonuclease activity by proteolysis prevents
            breakage of unmodified bacterial chromosomes by type I restriction
            enzymes
  JOURNAL   Proc Natl Acad Sci U S A 96 (17), 9757-9762 (1999)
   PUBMED   10449767
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016220.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04313.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Marinobacter persicus"
                     /db_xref="taxon:930118"
     Protein         1..330
                     /product="type I restriction endonuclease"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=36474
     Region          7..>316
                     /region_name="COG0610"
                     /note="Type I site-specific restriction-modification
                     system, R (restriction) subunit and related helicases ...
                     [Defense mechanisms]"
                     /db_xref="CDD:440375"
ORIGIN      
        1 mfqdeiekve lpaieqltrl gwtfvpgadl vpalpvdgsp vgergyyrdv vlpkrleaai
       61 vrlnpwisde nlrkvireft hpnhaglmey nqsiydllvn ylsveqdlga grkgqtvkvi
      121 dfdnpennef lctnqfkveg inqniipdiv cfvnglplav ieckspyvad avaeginqlr
      181 ryanlrnped degaqklfwy nqlmvstcrd qakvgtisss aqhygdwkda ypytdadira
      241 maqqpafist gtassshkag dvpspeylva akqvaagvda dasissseit lqqrllagmf
      301 npasfldlmq nftlfepvas prysrhltaa
//
LOCUS       WP_258075652             431 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Marinobacter persicus].
ACCESSION   WP_258075652
VERSION     WP_258075652.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter persicus
  ORGANISM  Marinobacter persicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Marinobacter persicus"
                     /db_xref="taxon:930118"
     Protein         1..431
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=46576
     Region          23..415
                     /region_name="2A0106"
                     /note="metabolite-proton symporter; TIGR00883"
                     /db_xref="CDD:273320"
ORIGIN      
        1 mskdtqqprs pelrhrimag fignvvewyd favygylagv iapvffpags ptaaligtyg
       61 ifaagfimrp lgaavfgwfg drygrartmq isvilmalpt lllgllpsye qvgllapvll
      121 vlirlfqgls vggefsssat ylvetapkgk rgitgswani gsmtgsllgv aaaalvtnaf
      181 dtqtlddwaw rlpflggail glsailvrrn lhnserftqh helrdetspl lqafttnrye
      241 tllalafass ygtcyylvfv ylpewlaaeq lmarstalli ntammilvip amplfavvgd
      301 rymrrrtwia lsllllallg wplhvwmlds ggsltavias halvflllav plgsapalfv
      361 elfpesdrls gysvafnlgl gvfggltpmi ataliattgi lttpamylal tafiavlalm
      421 mmpdrsrepl r
//
LOCUS       WP_258075702             145 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase, partial [Enterococcus faecium].
ACCESSION   WP_258075702
VERSION     WP_258075702.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 145)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 145)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..>145
                     /product="aldo/keto reductase"
     Region          1..>145
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     Site            order(32,37,62,105)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381296"
ORIGIN      
        1 mglshgygpa tdtrqaieli raavergvtf fdtaevygpy lneevvgeal kpfrdrvvia
       61 tkfgftfgdd nkqqilnsrp ehireavegs lrrlktdvid llyqhrvdpd vpiedvagtv
      121 kdliaegkvk hfglseagaq tirra
//
LOCUS       WP_258075516             192 aa            linear   BCT 02-MAR-2025
DEFINITION  QsdR family transcriptional regulator [Marinobacter persicus].
ACCESSION   WP_258075516
VERSION     WP_258075516.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter persicus
  ORGANISM  Marinobacter persicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (residues 1 to 192)
  AUTHORS   El Sahili,A., Kwasiborski,A., Mothe,N., Velours,C., Legrand,P.,
            Morera,S. and Faure,D.
  TITLE     Natural Guided Genome Engineering Reveals Transcriptional
            Regulators Controlling Quorum-Sensing Signal Degradation
  JOURNAL   PLoS One 10 (11), e0141718 (2015)
   PUBMED   26554837
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037470.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18598.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Marinobacter persicus"
                     /db_xref="taxon:930118"
     Protein         1..192
                     /product="QsdR family transcriptional regulator"
                     /calculated_mol_wt=21775
ORIGIN      
        1 mppqhtkttp ldafrrarkm wlkgekisla aladdlnigr atlfrwvgnr dlliaeilws
       61 lyeplykear antpgegidy ivgvyryint talhfkplrk flhqdpeyal kmltsshstl
      121 htrtvelntr llkdevragh lsppmniqsl syfmiriaes cvysdliggh epredeleda
      181 ctavrillgg kv
//
LOCUS       WP_258075715             209 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Vibrio jasicida].
ACCESSION   WP_258075715
VERSION     WP_258075715.1
KEYWORDS    RefSeq.
SOURCE      Vibrio jasicida
  ORGANISM  Vibrio jasicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 209)
  AUTHORS   Davies,D.R., Mahnke Braam,L., Reznikoff,W.S. and Rayment,I.
  TITLE     The three-dimensional structure of a Tn5 transposase-related
            protein determined to 2.9-A resolution
  JOURNAL   J Biol Chem 274 (17), 11904-11913 (1999)
   PUBMED   10207011
REFERENCE   2  (residues 1 to 209)
  AUTHORS   DasSarma,S.
  TITLE     Identification and analysis of the gas vesicle gene cluster on an
            unstable plasmid of Halobacterium halobium
  JOURNAL   Experientia 49 (6-7), 482-486 (1993)
   PUBMED   8335077
REFERENCE   3  (residues 1 to 209)
  AUTHORS   Ferrante,A.A. and Lessie,T.G.
  TITLE     Nucleotide sequence of IS402 from Pseudomonas cepacia
  JOURNAL   Gene 102 (1), 143-144 (1991)
   PUBMED   1650732
REFERENCE   4  (residues 1 to 209)
  AUTHORS   De Meirsman,C., Van Soom,C., Verreth,C., Van Gool,A. and
            Vanderleyden,J.
  TITLE     Nucleotide sequence analysis of IS427 and its target sites in
            Agrobacterium tumefaciens T37
  JOURNAL   Plasmid 24 (3), 227-234 (1990)
   PUBMED   1963949
REFERENCE   5  (residues 1 to 209)
  AUTHORS   Sato,S., Nakada,Y. and Shiratsuchi,A.
  TITLE     IS421, a new insertion sequence in Escherichia coli
  JOURNAL   FEBS Lett 249 (1), 21-26 (1989)
   PUBMED   2542093
REFERENCE   6  (residues 1 to 209)
  AUTHORS   Kroger,M. and Hobom,G.
  TITLE     Structural analysis of insertion sequence IS5
  JOURNAL   Nature 297 (5862), 159-162 (1982)
   PUBMED   6281654
REFERENCE   7  (residues 1 to 209)
  AUTHORS   Klaer,R., Kuhn,S., Tillmann,E., Fritz,H.J. and Starlinger,P.
  TITLE     The sequence of IS4
  JOURNAL   Mol Gen Genet 181 (2), 169-175 (1981)
   PUBMED   6268937
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01609.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Vibrio jasicida"
                     /db_xref="taxon:766224"
     Protein         1..>209
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <5..141
                     /region_name="transpos_IS4_1"
                     /note="IS4 family transposase; NF033592"
                     /db_xref="CDD:468101"
ORIGIN      
        1 minwqrqhns shwmtpiksn tqyevikkld kegrdlivem dvsqharkqd pslpekwqar
       61 lalypepeqp nhikgvltsl tdsqydlqsl ldvyferwev ensygeikhd mledelllrs
      121 qsvegieqev wgiliaynlv rveisriake akvsplrisf mmalrdiqde lmwcaiaspg
      181 sipkklramr ervkryilpe rkkrpksrt
//
LOCUS       WP_258075750             541 aa            linear   BCT 02-MAR-2025
DEFINITION  GMC oxidoreductase [Rathayibacter sp. AY1F3].
ACCESSION   WP_258075750
VERSION     WP_258075750.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1F3
  ORGANISM  Rathayibacter sp. AY1F3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05199.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Rathayibacter sp. AY1F3"
                     /db_xref="taxon:2080558"
     Protein         1..541
                     /product="GMC oxidoreductase"
                     /GO_function="GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /calculated_mol_wt=56789
     Region          <198..514
                     /region_name="BetA"
                     /note="Choline dehydrogenase or related flavoprotein
                     [Lipid transport and metabolism, General function
                     prediction only]; COG2303"
                     /db_xref="CDD:441878"
ORIGIN      
        1 mtstststst stsgpvvvvv gsgpigsaya rillestdda rvvmleagpq vtptpgesvr
       61 niadpgeker arersqgpqa gehreslgip aaavvegmft arqgthlldf ggagsahtdt
      121 fpaaaastnv ggmgahwtca iprpagserv pflddaewdg lvetaehllh aqaaafadsg
      181 igaalrslle eefaaelpdg agvgtlpvag dpqpdgtmrw agadvvlgpl idpasplsqr
      241 felrdlhlvr rillegttav gvrvedlrtg evedlpadlv vvaadafrtp qllwasgvrp
      301 aalgrylteh pvvistvsld gdsmgrfatr ddlarekaar avnpadpisa vnripfsepg
      361 hpfslqvmya esppfplspd hpehgnewgy vnmgygmrkq prvedgvsfd ddeldyrgfp
      421 nmtvdyalge qeeaeiadat ehlrrageal gtfiaeprll ppgsslhymg ttrmgaaddg
      481 tsvvdpdsrv wghtnlivgg ngviptatsm nptlmsvala vrgaraaaar lsasasvaer
      541 r
//
LOCUS       WP_258075732             541 aa            linear   BCT 02-MAR-2025
DEFINITION  VPA1269 family protein, partial [Marinobacter persicus].
ACCESSION   WP_258075732
VERSION     WP_258075732.1
KEYWORDS    RefSeq.
SOURCE      Marinobacter persicus
  ORGANISM  Marinobacter persicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (residues 1 to 541)
  AUTHORS   Hurley,C.C., Quirke,A., Reen,F.J. and Boyd,E.F.
  TITLE     Four genomic islands that mark post-1995 pandemic Vibrio
            parahaemolyticus isolates
  JOURNAL   BMC Genomics 7, 104 (2006)
   PUBMED   16672049
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024410.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13009.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Marinobacter persicus"
                     /db_xref="taxon:930118"
     Protein         <1..>541
                     /product="VPA1269 family protein"
     Region          50..>88
                     /region_name="INT_rpt"
                     /note="Integrase repeat unit; pfam14882"
                     /db_xref="CDD:434282"
     Region          108..160
                     /region_name="INT_rpt"
                     /note="Integrase repeat unit; pfam14882"
                     /db_xref="CDD:434282"
     Region          167..219
                     /region_name="INT_rpt"
                     /note="Integrase repeat unit; pfam14882"
                     /db_xref="CDD:434282"
     Region          226..278
                     /region_name="INT_rpt"
                     /note="Integrase repeat unit; pfam14882"
                     /db_xref="CDD:434282"
     Region          285..334
                     /region_name="INT_rpt"
                     /note="Integrase repeat unit; pfam14882"
                     /db_xref="CDD:434282"
     Region          344..>377
                     /region_name="INT_rpt"
                     /note="Integrase repeat unit; pfam14882"
                     /db_xref="CDD:434282"
     Region          404..>541
                     /region_name="Integrase_2"
                     /note="Putative integrase; pfam13009"
                     /db_xref="CDD:432936"
ORIGIN      
        1 klpaapdkhy aedwadwpnf lrnerpreky vtlaeaseva qrlgfktrte yhegyqkdpk
       61 lpsnpqrsya gewddwysfl gverperyaa laeaseaaqr lgfktqqeyy edyqkdpklp
      121 sqpsvfyaed wddwysflgt erpsekhatv aeaseaaqrl glktqaeyye dyqkdpklpg
      181 spndfyaedw sswynflgtg rpdgkyatla easeaaqrlg fktsteyfeg ykqdpklprh
      241 pdgmyrrnwa dwysflgner pkekyatlae aseaaqrlgf ktqkefyegy kqdpkltvsp
      301 fdiyaedwdd wysylgierp vkryatlaea seaaqclglk tgaeyfrgye kdpklpsqpn
      361 ktysehwisw phflgnenai nreltskype fwkaiqcyve agtgqsnkys hlrallrfyv
      421 dklglvddpg amlsrdipfd erayenfinv tadtvkkprh nacsaffewi letycsdedd
      481 ngelivlpgy rnplrtvlkg lldqlpsykr sesdkpplpm daivrakqhl ipleatsfrd
      541 l
//
LOCUS       WP_258075753            1112 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase family protein [Rathayibacter sp. AY1F3].
ACCESSION   WP_258075753
VERSION     WP_258075753.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1F3
  ORGANISM  Rathayibacter sp. AY1F3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04851.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Rathayibacter sp. AY1F3"
                     /db_xref="taxon:2080558"
     Protein         1..1112
                     /product="DEAD/DEAH box helicase family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=123280
     Region          6..99
                     /region_name="DUF4145"
                     /note="Domain of unknown function (DUF4145); pfam13643"
                     /db_xref="CDD:433374"
     Region          191..1106
                     /region_name="HsdR"
                     /note="Type I site-specific restriction endonuclease, part
                     of a restriction-modification system [Defense mechanisms];
                     COG4096"
                     /db_xref="CDD:443272"
ORIGIN      
        1 mfadasraes ylssdprsac fysrraveql vghlyevldl pvpyqddlaa rindagfarv
       61 agvgigqkln lirklgnqav hvpqpirpdi alavlrelhh vlvwavfrhs ahpevvptga
      121 afdpalaara apltredvqr laakfaaqde ahvkalaerd elaagqaaei erlraqvaaa
      181 qasnhasddh dyseaetrdl fidvllaeag wpltdardre fevagmpngq gvgfvdyvlw
      241 gsdglplavv eakrttksaq vgqqqaklya dcleaefgrr pvvfftngye hwlwddaagy
      301 pprpvagfft rselelmiqr rstrlplsga alssgiasrh yqvrairavg dtfdrkqrqa
      361 llvmatgsgk trtvialadq lmkanwakri lfladrtalv nqaanafkah lpgaatvnlv
      421 ternaegrvy vstyptmmnl idqvtdgegg ptrrfgpgff dlivideahr siyqkygaif
      481 dwfdallvgl tatpkdevdh ntyrrfhled gvptdaygld eavaegflvp prgvsvgtrf
      541 lrqgiryddl seaekddwda ldwgdggtpt tvdadevnrf lfnedtvdkv latlmtrgyk
      601 vaggdrlgkt ivfaknqaha efiqqrfdkq ypehaghfar vithstpyaq nlidefsiad
      661 laphiaisvd mldtgidvpe ivnlvffkpv rsktkfwqmi grgtrlrpdl fgegqpkqdf
      721 lvfdfcgnle ffsqdlpase gstqksltqr lfearlglit aldrahldek lrasaadtlh
      781 eivagmnidn flvrperrwv eqfadstawd altpedaaev lehlaglpsq vtdddvdakr
      841 fdllilrrql aqldgdlaaa drirqqvqai ttallaktai ppvaeqlvll eevatddwwi
      901 dvtlgmleia rqriralvrf vpnvtrprvy tdfidelsda teiqlrqttp gtdlerfrak
      961 aaaylrqhed hlalqrlrrn rqltpddlsa letmllasga gskadielat eqahglgpfi
     1021 rslvgldrea alesfarfld gsrfsvdqir fihliadelt snglmdagrl yespytdrap
     1081 sgvdylfdes dvtviveila dveararpei va
//
LOCUS       WP_258075777             900 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Rathayibacter sp. AY1F3].
ACCESSION   WP_258075777
VERSION     WP_258075777.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1F3
  ORGANISM  Rathayibacter sp. AY1F3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 900)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Rathayibacter sp. AY1F3"
                     /db_xref="taxon:2080558"
     Protein         1..900
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=92871
     Region          66..324
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     Region          351..894
                     /region_name="PRK09274"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:236443"
ORIGIN      
        1 msaphpaeri rgalgstaaa qlppagldgl dpawsrlvda pdaqgvprrw hlldtgealg
       61 tepvgtvlcv hgnptwsylw rrlaaatles arsggpawrv vavdqlemgf sertgalhtl
      121 adrvrelsnl tdvlglddvv tlghdwggvv slgwavdhpe qlratmllnt aihqsadepi
      181 paplrlalas gvlgastvgt paflettlal ghpalpsavk egyrapyrsa srrggvggfv
      241 adipvdsahp sdpelqriae gvsalttpal mlwgpldpif sdrylddlvd rlphaqvhry
      301 egaghlvaed vdyssavltw lgdlsdgeep fggdpapdvr rptapveplw ahldrnaqdd
      361 slalvemapp ggggprsvsw rllsqrvrel aaglrasgvs pgdrvsllvp pgadltally
      421 aclrigavvv vadaglglrg ltravrgawp dlvvgalpgl avaralrwpg grvstqtlpr
      481 asasalgvdt slgqlielgr aelaadpeal geapaadava ailftsgstg pakgvvythr
      541 qlagvrdala rqygigpgtg lvagfapfal lgpalgtrsa tpdmdvtapr tltaaavaaa
      601 aarvdatvlf lspaalanvv atagaldtdd hralagvrtf lsagapvsag llgeaqalmp
      661 nasartpygm tegllltdas legireaasd ddprggvcvg vpaagvrlri apldadgraa
      721 depeeitgtt geivvsaghv edhyerlwlt draarvgavp gerwhrtgdv gridsagrlw
      781 vegrmphvvv tpdgvvtpvg peqriearva pvaraaivga gprgvaqlva vvelrsgarr
      841 vvlaeealaa evraavgrpv aavlvvpalp tdirhnskid raalsrwaeg vlaggrmvap
//
LOCUS       WP_258075801             307 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-dependent oxidoreductase [Rathayibacter sp. AY1F3].
ACCESSION   WP_258075801
VERSION     WP_258075801.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1F3
  ORGANISM  Rathayibacter sp. AY1F3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Dengler,U., Niefind,K., Kiess,M. and Schomburg,D.
  TITLE     Crystal structure of a ternary complex of D-2-hydroxyisocaproate
            dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate
            at 1.9 A resolution
  JOURNAL   J Mol Biol 267 (3), 640-660 (1997)
   PUBMED   9126843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02826.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Rathayibacter sp. AY1F3"
                     /db_xref="taxon:2080558"
     Protein         1..307
                     /product="NAD(P)-dependent oxidoreductase"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
                     /calculated_mol_wt=31638
     Region          6..307
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(136..138,140,158..160,190..191,218)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:240631"
ORIGIN      
        1 mtvprvavlp rpkpvfaeav esgggvvvgl despdallwl sygrtdelaa vleehpsirw
       61 vqlpwagvdv fapvlaasra dvvwtsakga yaepvaehal alvlallrsl peraraaswg
      121 skkavtlhra svvilgaggi arellrllav fdcrvtivrr gdepvegaar tlpasrlaea
      181 aadadvlvla aaatagterm vdagllarlp ahavlvnvar gslvdtdalg aalaqgrlag
      241 aaldvtdpep lpdghplwse prclitphsa dtpeitapll aervranvaa caaggpfvgr
      301 vdpgsgy
//
LOCUS       WP_258075916             476 aa            linear   BCT 02-MAR-2025
DEFINITION  SpaA isopeptide-forming pilin-related protein, partial
            [Enterococcus faecium].
ACCESSION   WP_258075916
VERSION     WP_258075916.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 476)
  AUTHORS   Kang,H.J., Paterson,N.G., Gaspar,A.H., Ton-That,H. and Baker,E.N.
  TITLE     The Corynebacterium diphtheriae shaft pilin SpaA is built of tandem
            Ig-like modules with stabilizing isopeptide and disulfide bonds
  JOURNAL   Proc Natl Acad Sci U S A 106 (40), 16967-16971 (2009)
   PUBMED   19805181
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2009 Oct 27;106(43):18427]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037639.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17802.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..476
                     /product="SpaA isopeptide-forming pilin-related protein"
     Region          2..101
                     /region_name="CollagenBindB"
                     /note="Repeat unit of collagen-binding protein domain B;
                     cl15753"
                     /db_xref="CDD:417766"
     Site            order(33..34,64,67,69,82,85,87,90,95,97..98)
                     /site_type="other"
                     /note="domain interaction interfaces [polypeptide
                     binding]"
                     /db_xref="CDD:212461"
     Region          <95..435
                     /region_name="ClfA"
                     /note="Clumping factor A-related surface protein, MSCRAMM
                     (microbial surface components recognizing adhesive matrix
                     molecules) family, DEv-IgG fold [Cell
                     wall/membrane/envelope biogenesis]; COG4932"
                     /db_xref="CDD:443959"
ORIGIN      
        1 lweefdnnpa drpdqvtfei qrehttnaaa wkngyiritk ptkdtantwe radveklsan
       61 sgesyqeils lpqynnqgqa fsyqtikelp vpgydsqqid altwkntkqf tpldlkitkn
      121 sstgekdlig avfkltgdsi dtlltdngdg tyslpenvkl qkemtytlte tkapeghels
      181 kkttwkikia snstvtvdgk ivttsddtiq ltienpfiei piavrkytmq gtgkemnlkg
      241 aafalqkket ngayqpmdnq ttnekglaif dsltpgeyrv vetagpagyd tspgnyefqi
      301 dkygkiiytg kniettngmw tlthqnrlka fdltvhkked ngqalkgakf rlqgpeidle
      361 lpkdgqetdt flfenlkpgt ykltetftpg gyqglkdpvt iiikedgsiq vegqdyesvl
      421 spgaknnqis lditnqakvp lpetggigrl giylvgmigc tfsiwylffk kerggs
//
LOCUS       WP_258075956             130 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-hairpin-helix domain-containing protein, partial
            [Enterococcus faecalis].
ACCESSION   WP_258075956
VERSION     WP_258075956.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Enterococcus faecalis"
                     /db_xref="taxon:1351"
     Protein         <1..130
                     /product="helix-hairpin-helix domain-containing protein"
     Region          <1..123
                     /region_name="uvrC"
                     /note="excinuclease ABC subunit UvrC; PRK00558"
                     /db_xref="CDD:234792"
ORIGIN      
        1 qlgvdipvag lakndkhkts ellfgpnlev vplernsqef fllqriqdev hrfaitfhrq
       61 lrsknsfask ldnieglgpk rkknllkefk slknitaasv eelrkaglpe tvaknvyrhl
      121 hqettseiek
//
LOCUS       WP_258075963             351 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Enterococcus faecalis].
ACCESSION   WP_258075963
VERSION     WP_258075963.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 351)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 351)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 351)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 351)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Enterococcus faecalis"
                     /db_xref="taxon:1351"
     Protein         1..>351
                     /product="ATP-binding protein"
     Region          6..>349
                     /region_name="GyrB"
                     /note="DNA gyrase/topoisomerase IV, subunit B
                     [Replication, recombination and repair]; COG0187"
                     /db_xref="CDD:439957"
ORIGIN      
        1 makkinneyn dasiqvlegl eavrkrpgmy igstdsrglh hlvyeivdna vdealsgygn
       61 einvtiqkdn sicvadsgrg mptgmhasgi ptveviftvl haggkfgqgg yktsgglhgv
      121 gasvvnalsk wlevhivrdg veymerfedg gkpvgtlkki gktkkrngts vtflpddtif
      181 sttnfsyeil aerlresafl lkgvkitltd ergeepkeev fhyeegikef vaylneekdt
      241 ltpvvyfsga kegievelay qyndgysenv lsfvnnvrtk dggthevgmk tsmtkayney
      301 arkvgllkek dknlegsdfr eglaavlsir vpenllqfeg qtkgklgtpl a
//
LOCUS       WP_258075976             256 aa            linear   BCT 02-MAR-2025
DEFINITION  2Fe-2S iron-sulfur cluster-binding protein [Methylobacter
            tundripaludum].
ACCESSION   WP_258075976
VERSION     WP_258075976.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter tundripaludum
  ORGANISM  Methylobacter tundripaludum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024900.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13510.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Methylobacter tundripaludum"
                     /db_xref="taxon:173365"
     Protein         1..256
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /calculated_mol_wt=27894
     Region          1..231
                     /region_name="PRK07569"
                     /note="bidirectional hydrogenase complex protein HoxU;
                     Validated"
                     /db_xref="CDD:181037"
ORIGIN      
        1 msktitidgk vipfedgqti mdaamaagvy iphlchqpef tphgscklct vkvngrncsa
       61 ctypamdgqe vlnetqelid drkritqmlf vegnhlcpgc ektgncqlqa vayhlnmldn
      121 hfpafypere vdashpevmi dhnrcifctl cvrashekdg kdvfaisgrg ihkhlivnae
      181 sgllkdtdma atdhaahicp tgailikrtg yqvpigeriy dhkeidqvsl aasgsrlvaa
      241 lppsmavgte niknge
//
LOCUS       WP_258076042            1870 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Methylobacter
            tundripaludum].
ACCESSION   WP_258076042
VERSION     WP_258076042.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter tundripaludum
  ORGANISM  Methylobacter tundripaludum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
REFERENCE   1  (residues 1 to 1870)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 1870)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1870
                     /organism="Methylobacter tundripaludum"
                     /db_xref="taxon:173365"
     Protein         1..1870
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=203083
     Region          <1..732
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          753..844
                     /region_name="Methyltransf_12"
                     /note="Methyltransferase domain; pfam08242"
                     /db_xref="CDD:400515"
     Site            order(755..761,781..782,805..807,827)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     Region          995..>1126
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Region          1179..1462
                     /region_name="PKS_ER"
                     /note="Enoylreductase; smart00829"
                     /db_xref="CDD:214840"
     Site            order(1188,1269,1290,1292..1295,1314,1318,1333..1334,1357,
                     1379,1402..1404,1451..1452,1454,1456)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176179"
     Region          <1445..1701
                     /region_name="KR_2_FAS_SDR_x"
                     /note="beta-ketoacyl reductase (KR) domain of fatty acid
                     synthase (FAS), subgroup 2, complex (x); cd08955"
                     /db_xref="CDD:187658"
     Site            order(1483..1484,1486,1506..1509,1533..1536,1561..1563,
                     1584..1585,1607..1608,1622,1649..1650)
                     /site_type="other"
                     /note="putative NADP binding site [chemical binding]"
                     /db_xref="CDD:187658"
     Site            order(1585,1609,1622,1626)
                     /site_type="active"
                     /db_xref="CDD:187658"
     Region          1739..1824
                     /region_name="PKS_PP"
                     /note="Phosphopantetheine attachment site; smart00823"
                     /db_xref="CDD:214834"
ORIGIN      
        1 mqalpsggam aavfagearv aqalaghvrl aiaavngaen vvisgdetal nhvldelqae
       61 qighrrlsvs hafhsplmep mlaefakiaa eihyhapslp lvsnvtgrlv gediatpayw
      121 vehirrpvrf adsldtlhhr hcqlflelgp npvllgmarh gcpdailips lrqqaaddeq
      181 flralgelfv qgvaidwnav ypkqtrqplq lptypfqrqr fwvdrassah etgrtahadv
      241 khpllgqclr lpampkgeir yeqtlndkgy iqdhrvfhqs vlpaaayiem glaaaskdsd
      301 aalpglenit iqqalvfsen rdktvqlvlt qateqparfe iyslsdnepe qwtfhvagni
      361 aaitpivapp avdmktieae feeeiaieaf yrqcaqrgid ygpdfqalqs lrrsegralg
      421 sirlperlva etahyhihpv lldacfqvli atlsdnsane twlpvgldrl qlyrapgnrl
      481 wcrvqvhktt eqpllkadlv lfdehgeiig iiegfkakqa apdnllsaqs dleswlygvd
      541 wraqglcsph anaallaspt amsdalnasm atwvrqsrle ecgialdeld qlcvdyalaa
      601 frdmgktfqp edgfstleia dglgivpdhr hllertleml aeagvlqrtg tswevlrapt
      661 lsnpqqaaqd lrtrypqigl eldlvercgs alarvlqgrc dplqellfpg gdgsalaaly
      721 rdppgaqavg avfkqtllsa leplpqrsgi rileigagtg gassfllphl aahrteyvft
      781 dispaftlqa qttfaaypfi eyktldiekd pqmqgfkrhd ydiivasnvl hatenlaqtl
      841 khtrsllapg glllllegta pqnwidiifg mtsgwwrfsd khlrpshpll sgqswcdalq
      901 asgfqqtgci dcapihqsii maqadalpvd asptqpwlif adaggtgerl geylraagsa
      961 ctlvypgsqy rrmqqdsfti apyqaahyqr lfselgdasv aycahlwsld tltpsddaps
     1021 ltanarlgwe tvlhlvqalg karpsnpprl alltrgavsv sgeavaglaa spvwglgksi
     1081 alehpelrci ridlaagarp deipaivaem tadtqaqaed qiafrderrl vsrlvrrggk
     1141 qslpqtesyq lgvpasgslg emawspterh aprageveir vhaaglnfkd vllalhrvpa
     1201 agpvlgieca gvvarvgsgv shlsvgdkvl amapgsfsry vnasactvaa lpedlsfeea
     1261 atlpiaflta ayaledlarl qagervliha aaggvgqaai qlaqragaev fataseskwd
     1321 vlralgvkhi mnsrtldfad eirrltdgkg vdvvlntlsg eftsqslall rsggrfleig
     1381 itdlrtpeei aelapgisyh aidlmhlyqk kptllqallq qlvgefrngq lkplprtvfa
     1441 andaqtafrn mqqanhtgkl vlsfdtaalp frkdasylis gglgdlgllv aawmaehgag
     1501 hlvlagrrgv thateakira itqagaevsl fqvdiskpeq tarmlteieq tlpllcgimh
     1561 aagvlddgvl ieqtperyak vlepkldgaw qlhiqtqalp leffimfssa tsllgsvgqs
     1621 nhvsanafld alaydrlahg lpalsinwga wseigyaarv qageflkaqg mgtidprtgl
     1681 aalerifhcd kaqvgvvpid wptylqrias sgyladfrre fsstqsalae qpaefrqlle
     1741 svpvderlal ltrhvtsqva tvlgfpasmt vdrkqgffdm gmdsltsvel rnrlraslgc
     1801 alpstlafdf psvtalvdyl aedllgrepi dpspqtetge naerkaleql teeeaeanll
     1861 keledmgfsl
//
LOCUS       WP_258076072             250 aa            linear   BCT 02-MAR-2025
DEFINITION  GHKL domain-containing protein [Enterococcus faecium].
ACCESSION   WP_258076072
VERSION     WP_258076072.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025854.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14501.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..250
                     /product="GHKL domain-containing protein"
                     /calculated_mol_wt=28158
     Region          <38..226
                     /region_name="CitA"
                     /note="Sensor histidine kinase DipB regulating
                     citrate/malate metabolism [Signal transduction
                     mechanisms]; COG3290"
                     /db_xref="CDD:442519"
ORIGIN      
        1 minsyfvivy sllslfsasi fvfsarkyyk nkeienylhy lkqyatdiek kysdlrafkh
       61 dyknmlismg nyiergnlee ltkyfkqnil etsktifdns lelselgnlk vvslksifls
      121 klnsvdtkrt kvsifvfnev dsvavdelvl vrslgiildn aveatrmaks egfiecailk
      181 dmgsvsfiis nsvsenlppl hqlkvsgyst kgsnrglgls nldsivahea hlsletsiqd
      241 nkfcqiltvn
//
LOCUS       WP_258076088             355 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Enterococcus faecium].
ACCESSION   WP_258076088
VERSION     WP_258076088.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 355)
  AUTHORS   Kreikemeyer,B., Beckert,S., Braun-Kiewnick,A. and Podbielski,A.
  TITLE     Group A streptococcal RofA-type global regulators exhibit a
            strain-specific genomic presence and regulation pattern
  JOURNAL   Microbiology (Reading) 148 (Pt 5), 1501-1511 (2002)
   PUBMED   11988525
REFERENCE   2  (residues 1 to 355)
  AUTHORS   McIver,K.S. and Myles,R.L.
  TITLE     Two DNA-binding domains of Mga are required for virulence gene
            activation in the group A streptococcus
  JOURNAL   Mol Microbiol 43 (6), 1591-1601 (2002)
   PUBMED   11952907
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016901.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05043.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..355
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=41714
     Region          26..>217
                     /region_name="BglG"
                     /note="Transcriptional antiterminator [Transcription];
                     COG3711"
                     /db_xref="CDD:442925"
ORIGIN      
        1 mvgflekqle rqimliclls mdmaeindla eelkvtdkti iadidnfnss cfpayievnq
       61 ykevtlkips nlnlddifik ilnnsiyiev lkyiliseps lteisaklfl sktsvrriit
      121 kintyfsker ldiqiilttr lqiigdeiyi rkffssmfke ickekdlpyf emiykmlkrc
      181 likqgrdass skiiytvyyi ftsiirignd hlipkeelad rpavvdsime tiksdtvfct
      241 linqnykfvi srenienils pylsllftnp aetdeymlrr velflkhfyy lsninetvtp
      301 ekvlhftsfi tfykeltffk vsyadifykk ilkkkvqiwe ayqsaliisn ilfqe
//
LOCUS       WP_258076092             362 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-grasp domain-containing protein [Methylobacter tundripaludum].
ACCESSION   WP_258076092
VERSION     WP_258076092.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter tundripaludum
  ORGANISM  Methylobacter tundripaludum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014686.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02655.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Methylobacter tundripaludum"
                     /db_xref="taxon:173365"
     Protein         1..362
                     /product="ATP-grasp domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=40000
     Region          1..359
                     /region_name="PylC"
                     /note="Pyrrolysine biosynthesis ligase PylC and related
                     enzymes, ATP-grasp superfamily [Amino acid transport and
                     metabolism]; COG2232"
                     /db_xref="CDD:441833"
ORIGIN      
        1 metilivags grmlaqaakh aglkplvidl fadldmqgya edfrqvksla eqdsapavdy
       61 fieryavahv iygsgfecys eslyylnsrl imlgnhpdaf arqldkpaff stldalniph
      121 pdvvfsapgc aegwllkpmq gqggvgiqry dgdaadnsvy wqrfqagasy salfladgqe
      181 vqvvgfnsqw svrlsktqef vfsgvinnad lsdaqktvlt dwlkqmvpaf glkglnsldf
      241 ihadgcsyil einprpsasm qlydqdllnr hvgatsvals pevgrlkspp qtgyqvvyae
      301 rdliipdhfe wppwcmdlpk pgnmcragqp lcsiiahqkn srsvaeqllt kqqliinkle
      361 rf
//
LOCUS       WP_258076128             271 aa            linear   BCT 02-MAR-2025
DEFINITION  Hpt domain-containing protein [Methylobacter tundripaludum].
ACCESSION   WP_258076128
VERSION     WP_258076128.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter tundripaludum
  ORGANISM  Methylobacter tundripaludum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
REFERENCE   1  (residues 1 to 271)
  AUTHORS   Porter,S.W., Xu,Q. and West,A.H.
  TITLE     Ssk1p response regulator binding surface on histidine-containing
            phosphotransfer protein Ypd1p
  JOURNAL   Eukaryot Cell 2 (1), 27-33 (2003)
   PUBMED   12582120
REFERENCE   2  (residues 1 to 271)
  AUTHORS   Kato,M., Mizuno,T., Shimizu,T. and Hakoshima,T.
  TITLE     Insights into multistep phosphorelay from the crystal structure of
            the C-terminal HPt domain of ArcB
  JOURNAL   Cell 88 (5), 717-723 (1997)
   PUBMED   9054511
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013767.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01627.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Methylobacter tundripaludum"
                     /db_xref="taxon:173365"
     Protein         1..271
                     /product="Hpt domain-containing protein"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=31126
     Region          <45..235
                     /region_name="PRK11107"
                     /note="hybrid sensory histidine kinase BarA; Provisional"
                     /db_xref="CDD:236848"
ORIGIN      
        1 mplkkpfivl mtgnidinhs sfnqrrqdii aatqyddilm hiettqfdli lfdlpvncsv
       61 attparlrhf cppwmeempr tagsslgrhp wqseliarik dplgmnsktp viaivnptkd
      121 sqseqqcpte fddiltgpit eqrlnelidl wktkalaldy iqillsktkn nrrltltlfe
      181 klfeelplqv idikdalenk qydlareith klngsvsfcg lmdiqqpant lescllndny
      241 asihrhflml qqrtlnftch qkfilenfgk y
//
LOCUS       WP_258076162             309 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA/RNA non-specific endonuclease [Methylobacter tundripaludum].
ACCESSION   WP_258076162
VERSION     WP_258076162.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter tundripaludum
  ORGANISM  Methylobacter tundripaludum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
REFERENCE   1  (residues 1 to 309)
  AUTHORS   Miller,M.D., Tanner,J., Alpaugh,M., Benedik,M.J. and Krause,K.L.
  TITLE     2.1 A structure of Serratia endonuclease suggests a mechanism for
            binding to double-stranded DNA
  JOURNAL   Nat Struct Biol 1 (7), 461-468 (1994)
   PUBMED   7664065
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013395.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01223.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Methylobacter tundripaludum"
                     /db_xref="taxon:173365"
     Protein         1..309
                     /product="DNA/RNA non-specific endonuclease"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=33901
     Region          4..55
                     /region_name="PRK10040"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:182205"
     Region          95..281
                     /region_name="NUC1"
                     /note="DNA/RNA endonuclease G, NUC1 [Nucleotide transport
                     and metabolism]; COG1864"
                     /db_xref="CDD:441469"
ORIGIN      
        1 mkklllvfma vlilpftala qntscsgkkg gishcegakf vcndgsysrs kkacsggsee
       61 kdspsnktvn avgvsldset skktkitqlg dvlkldyqgf tvwldckerg avkfqynaqh
      121 dtgnetrakd fkldskvpke cqqtstaayg qgydrghqvp anhldyspea ikqsnyitni
      181 lpqasqmnrg awllteeiie cyrdidellv iggvimgnnp addyfvqshg vktpdaywkv
      241 virgagqder aiawivpnsk datrkhldsy lvsvdeleri tsekipvady akhekpsasw
      301 iiptgcnkg
//
LOCUS       WP_258076192             387 aa            linear   BCT 02-MAR-2025
DEFINITION  GHKL domain-containing protein [Enterococcus faecium].
ACCESSION   WP_258076192
VERSION     WP_258076192.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025854.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14501.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..387
                     /product="GHKL domain-containing protein"
                     /calculated_mol_wt=43945
     Region          1..386
                     /region_name="YesM"
                     /note="Sensor histidine kinase YesM [Signal transduction
                     mechanisms]; COG2972"
                     /db_xref="CDD:442211"
     Region          <175..363
                     /region_name="CitA"
                     /note="Sensor histidine kinase DipB regulating
                     citrate/malate metabolism [Signal transduction
                     mechanisms]; COG3290"
                     /db_xref="CDD:442519"
ORIGIN      
        1 misavifslv ylqfelfatg llwvyliamn ffvakstvhk slissssail ivifsdyltl
       61 finpmfnvnv geytrffytv ivalllsfaf rklvnttslf endlympmis liatgtflih
      121 fivitmerhv tnqrememin syfvivysll slfsasifvf sarkyyknke ienylhylkq
      181 yatdiekkys dlrafkhdyk nmlismgnyi ergnleeltk yfkqnilets ktifdnslel
      241 selgnlkvvs lksiflskln svdtkrtkvs ififnevdsv avdelvlvrs lgiildnave
      301 atrmaksegf iecailkdmg svsfiisnsv senlpplhql kvsgystkgs nrglglsnld
      361 sivaheahls letsiqdnkf cqiltvn
//
LOCUS       WP_258076206             273 aa            linear   BCT 02-MAR-2025
DEFINITION  YiiX/YebB-like N1pC/P60 family cysteine hydrolase, partial
            [Enterococcus faecium].
ACCESSION   WP_258076206
VERSION     WP_258076206.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 273)
  AUTHORS   Xu,Q., Rawlings,N.D., Chiu,H.J., Jaroszewski,L., Klock,H.E.,
            Knuth,M.W., Miller,M.D., Elsliger,M.A., Deacon,A.M., Godzik,A.,
            Lesley,S.A. and Wilson,I.A.
  TITLE     Structural analysis of papain-like NlpC/P60 superfamily enzymes
            with a circularly permuted topology reveals potential lipid binding
            sites
  JOURNAL   PLoS One 6 (7), e22013 (2011)
   PUBMED   21799766
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017519.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05708.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..>273
                     /product="YiiX/YebB-like N1pC/P60 family cysteine
                     hydrolase"
     Region          78..273
                     /region_name="Peptidase_C92"
                     /note="Permuted papain-like amidase enzyme, YaeF/YiiX, C92
                     family; cl46416"
                     /db_xref="CDD:480756"
ORIGIN      
        1 meeyyeefkn eyasfdqtfe eftsnyynqp fnsaiseedq lrdylntvne hyirkeaeql
       61 skdpplwsfn ignalenitf ekvptyhkyd lmnivqpgdi iferkragit pvflhhvmiv
      121 egiyeethsi ngkpetftyi rtieatdysp iletkaggvv ygvldderfd ytdstilrvp
      181 agttaqrnaa isfmrgqlgk qysvwgdimg rdrsstrndw ycssliwaay mnatpdgrid
      241 eltnendpsf qgidlertdf ingmgvtpnd ikk
//
LOCUS       WP_258076289             156 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein, partial [Neisseria
            gonorrhoeae].
ACCESSION   WP_258076289
VERSION     WP_258076289.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024908.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13518.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         <1..156
                     /product="helix-turn-helix domain-containing protein"
     Region          36..143
                     /region_name="InsE"
                     /note="Transposase InsE and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2963"
                     /db_xref="CDD:442203"
ORIGIN      
        1 rrlvlifvns lyfsisdslv rkwvaryrlh gesgikrrkh ttkysveykl eairpvtgqg
       61 msqkaaadql nlpdcsvlpq wlrlyrlngi nglkpkpkgr kpvkkqyppq tkkadylktk
      121 eelfaelayl kaeaavlkkl dalkevrqke rnlsqg
//
LOCUS       WP_258076320              83 aa            linear   BCT 02-MAR-2025
DEFINITION  protein rep, partial [Enterococcus faecium].
ACCESSION   WP_258076320
VERSION     WP_258076320.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 83)
  AUTHORS   Marsin,S. and Forterre,P.
  TITLE     A rolling circle replication initiator protein with a
            nucleotidyl-transferase activity encoded by the plasmid pGT5 from
            the hyperthermophilic archaeon Pyrococcus abyssi
  JOURNAL   Mol Microbiol 27 (6), 1183-1192 (1998)
   PUBMED   9570403
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013603.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01446.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..83
                     /product="protein rep"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
     Region          <6..80
                     /region_name="Rep_1"
                     /note="Replication protein; cl02412"
                     /db_xref="CDD:470569"
ORIGIN      
        1 tlqqnpddee knlkrlsdle eglhrkrlis yggllkeihk klnlddteeg dlihtdddek
       61 adedgfsiia mwnwerknyf ike
//
LOCUS       WP_258076342             156 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar-binding domain-containing protein [Enterococcus faecium].
ACCESSION   WP_258076342
VERSION     WP_258076342.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Jacobson,R.H., Zhang,X.J., DuBose,R.F. and Matthews,B.W.
  TITLE     Three-dimensional structure of beta-galactosidase from E. coli
  JOURNAL   Nature 369 (6483), 761-766 (1994)
   PUBMED   8008071
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014851.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02837.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..156
                     /product="sugar-binding domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=18462
     Region          21..>156
                     /region_name="LacZ"
                     /note="Beta-galactosidase/beta-glucuronidase [Carbohydrate
                     transport and metabolism]; COG3250"
                     /db_xref="CDD:442481"
ORIGIN      
        1 mnkteyprpq fvrkkwqnln gewlfafddq cvgmkekwgs hpqyydqkil vpfvyqcles
       61 gindqtphdi vwyyrefdin kqdgqraiih fgavdyyadi fvnghhvgrh sgghtsfsfd
      121 iteyftnekh qqlsvrvedp hkdesiprgk qfwqts
//
LOCUS       WP_258076343             421 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Enterococcus faecium].
ACCESSION   WP_258076343
VERSION     WP_258076343.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 421)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 421)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 421)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 421)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..>421
                     /product="ATP-binding protein"
     Region          4..>421
                     /region_name="GyrB"
                     /note="DNA gyrase/topoisomerase IV, subunit B
                     [Replication, recombination and repair]; COG0187"
                     /db_xref="CDD:439957"
ORIGIN      
        1 makkvnneyn dssiqvlegl eavrkrpgmy igstdsrglh hlvyeivdna vdealsgygs
       61 eidvtihedn sitvadsgrg mpvgmhasgi ptveviftvl haggkfgqgg yktsgglhgv
      121 gasvvnalsk wltvtivrdg veyqqkfkng gkpdgtlkki gktkkangti vhflpddtif
      181 sttkfsyeil aerlresafl lkgvkislsd lrgeepvkev fhyeegikef vdylneekdt
      241 ltpvvyfsge kegievevay qyndgysenv lsfvnnvrtk dggtheagmk aamtksyney
      301 arkvgllker dknlegsdfr eglaavlsir vpenllqfeg qtkeklgtpv artvvdnvis
      361 eqmgfylqen semsqmlvrk aikarearea arkareesrn gkkrkkgesl lsgkltpaqs
      421 r
//
LOCUS       WP_258076355             137 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Enterococcus
            faecalis].
ACCESSION   WP_258076355
VERSION     WP_258076355.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 137)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 137)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 137)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 137)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Enterococcus faecalis"
                     /db_xref="taxon:1351"
     Protein         1..137
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=15749
     Region          <2..129
                     /region_name="SunT"
                     /note="ABC-type bacteriocin/lantibiotic exporters, contain
                     an N-terminal double-glycine peptidase domain [Defense
                     mechanisms]; COG2274"
                     /db_xref="CDD:441875"
ORIGIN      
        1 mfvepnpkfl egtirdnlll ghrvpnsifn klirdfeink ilddlplgin fpgeaaikcl
       61 ssgqkqklal frgilkrpdi llvdegfsnm dkeyldrilp kfdswgikli vidhsnrvtk
      121 didyitmeny diknswm
//
LOCUS       WP_258076356             562 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein
            [Enterococcus faecalis].
ACCESSION   WP_258076356
VERSION     WP_258076356.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Enterococcus faecalis"
                     /db_xref="taxon:1351"
     Protein         1..562
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=64603
     Region          3..>553
                     /region_name="SunT"
                     /note="ABC-type bacteriocin/lantibiotic exporters, contain
                     an N-terminal double-glycine peptidase domain [Defense
                     mechanisms]; COG2274"
                     /db_xref="CDD:441875"
ORIGIN      
        1 mikrphvmqd siqdcgvaci emickfynin idrryiqeet gygmigislk amekffskvd
       61 anpeivnisk inrlnkenre minnslpaiv fleeeeiinh fvviwhigkk rilvsdptht
      121 kkewinnkqf ekraisylfv ekpkniflnh spkkvrfygk fikrnlkifs lvmffsiivs
      181 llstylsfnl gkninilekn iplqektfli qsisigfivl alvqvvvsyf knilvikgtf
      241 afetqlfkky inkmltihpk yfqlnssgef vsrisdilqv sndvmnffis vllnfcmyvf
      301 siitlfyfsk vmaiylvvis avvilffayi ypkiyhfgyt isksntdfqk klitfidgle
      361 efralnadky fsekvldkin kfitnnkklq ffgtnsnvfl slfntvgtvi liaigsllvl
      421 knsinlgnlt vlislsgivv sslnqfgsfq aqyesmqvas hrlesilinm enenvcgeii
      481 ldkkiesirc krvsikkgdt llldtvncei yrgknlsirg engsgkstli kslvrldddy
      541 kgqilinnid ikkstwtvyd qn
//
LOCUS       WP_258076451             224 aa            linear   BCT 02-MAR-2025
DEFINITION  primase C-terminal domain-containing protein [Enterococcus
            faecium].
ACCESSION   WP_258076451
VERSION     WP_258076451.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Iyer,L.M., Koonin,E.V., Leipe,D.D. and Aravind,L.
  TITLE     Origin and evolution of the archaeo-eukaryotic primase superfamily
            and related palm-domain proteins: structural insights and new
            members
  JOURNAL   Nucleic Acids Res 33 (12), 3875-3896 (2005)
   PUBMED   16027112
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020291.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08708.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..224
                     /product="primase C-terminal domain-containing protein"
                     /calculated_mol_wt=26102
     Region          <1..51
                     /region_name="PriCT_1"
                     /note="Primase C terminal 1 (PriCT-1); pfam08708"
                     /db_xref="CDD:430166"
     Region          121..>164
                     /region_name="IscR"
                     /note="DNA-binding transcriptional regulator, IscR family
                     [Transcription]; cl46820"
                     /db_xref="CDD:481160"
ORIGIN      
        1 mfalslayfs sgysietcey nmfefnnrld qpleekevik ivrsayseny qganreyiti
       61 lckawvssdl tskdlfvrqg wfkfkkkrse rqrvhlsewk kdlmayisek sdvykpylvt
      121 tkkeiretlg ipertldkll kvlkanqeif fkiksgrngg iqlasvksll lsiikvkkee
      181 kesyikaltn sfdlehtfiq ktlnklaerp ktdtqldlfs ydtg
//
LOCUS       WP_258076469             321 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein,
            partial [Staphylococcus aureus].
ACCESSION   WP_258076469
VERSION     WP_258076469.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (residues 1 to 321)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Staphylococcus aureus"
                     /db_xref="taxon:1280"
     Protein         <1..321
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
     Region          96..318
                     /region_name="YbxI"
                     /note="Beta-lactamase class D [Defense mechanisms];
                     COG2602"
                     /db_xref="CDD:442014"
ORIGIN      
        1 imdsvlktsf fnknilshsf ngkksllkrr linikegnlk kqsklilifi ciftffimii
       61 qsqflmgqsl tdynykkplq sdyqildesk nfgsnsgsfv mysmkkdkyy iynekesrkr
      121 yspdstykiy lalfgldrhi isdknsrmsw nhnhypfdsw nkdqdlntai qnsvnwyfer
      181 isnqlsknyt sdqlkqlnyg nknlgsykay wledslkisn leqvivlknm meqnnhfskn
      241 ekkqlsssll irknenyely gktgtgivng kynngwfvgy vitnhdkyyf sthlsdekas
      301 genakfinek ilkemgvlng q
//
LOCUS       WP_258076453             580 aa            linear   BCT 02-MAR-2025
DEFINITION  ArdC-like ssDNA-binding domain-containing protein, partial
            [Enterococcus faecium].
ACCESSION   WP_258076453
VERSION     WP_258076453.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 580)
  AUTHORS   Gonzalez-Montes,L., Del Campo,I., Garcillan-Barcia,M.P., de la
            Cruz,F. and Moncalian,G.
  TITLE     ArdC, a ssDNA-binding protein with a metalloprotease domain,
            overpasses the recipient hsdRMS restriction system broadening
            conjugation host range
  JOURNAL   PLoS Genet 16 (4), e1008750 (2020)
   PUBMED   32348296
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 580)
  AUTHORS   Krishnan,A., Burroughs,A.M., Iyer,L.M. and Aravind,L.
  TITLE     Unexpected Evolution of Lesion-Recognition Modules in Eukaryotic
            NER and Kinetoplast DNA Dynamics Proteins from Bacterial Mobile
            Elements
  JOURNAL   iScience 9, 192-208 (2018)
   PUBMED   30396152
REFERENCE   3  (residues 1 to 580)
  AUTHORS   Iyer,L.M., Burroughs,A.M., Anand,S., de Souza,R.F. and Aravind,L.
  TITLE     Polyvalent Proteins, a Pervasive Theme in the Intergenomic
            Biological Conflicts of Bacteriophages and Conjugative Elements
  JOURNAL   J Bacteriol 199 (15), e00245-17 (2017)
   PUBMED   28559295
  REMARK    Publication Status: Online-Only
REFERENCE   4  (residues 1 to 580)
  AUTHORS   Belogurov,A.A., Delver,E.P., Agafonova,O.V., Belogurova,N.G.,
            Lee,L.Y. and Kado,C.I.
  TITLE     Antirestriction protein Ard (Type C) encoded by IncW plasmid pSa
            has a high similarity to the 'protein transport' domain of TraC1
            primase of promiscuous plasmid RP4
  JOURNAL   J Mol Biol 296 (4), 969-977 (2000)
   PUBMED   10686096
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019997.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08401.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..580
                     /product="ArdC-like ssDNA-binding domain-containing
                     protein"
                     /GO_function="GO:0003697 - single-stranded DNA binding
                     [Evidence IEA]"
     Region          <209..419
                     /region_name="ArdC"
                     /note="Antirestriction protein ArdC [Replication,
                     recombination and repair]; COG4227"
                     /db_xref="CDD:443371"
ORIGIN      
        1 vrelleeavp tdslkekend hfyrvefnen dpekglksyg geivtfelid qlktldnqya
       61 aeagyykfyf eevkngevvd qirmdlgdgv nsnqpiylel aklceqvpek eqkqsvknep
      121 vskeqmqske tktkqkgyqk rtaeeikqev kslsqqalda vkkhthsped vkellnfmsr
      181 fpersfrnql lieeqfpgat aclgraalkk egiyikkgeq gnkifvrktv kgfyekgrgf
      241 vreieatped kkriesgqie vikktyytie kvfditqtql kpedypkifp nrvfdfqldk
      301 kgqselqagi qavannigiq irdmtesevy qrelgqarga yvrneftgee eivmntrntp
      361 tqhlatsihe laharmhkfs eldtatkelq aemtsyivck hfgmdtseka ipyiaawtkn
      421 gqtldnkeaa ergkimndvs rvanefiqti sneinqyrer epeiqpaevk qehkntveta
      481 eqknivpvgs lwidkkdgkv meedtgrtlh lkdaafiedp qhnqvilkgk sygkeiqtal
      541 pseefalgnp frfsletvse vakrkneiyy eqqlsqkerv
//
LOCUS       WP_258076486             691 aa            linear   BCT 02-MAR-2025
DEFINITION  type I restriction endonuclease subunit R, EcoR124 family, partial
            [Enterococcus faecium].
ACCESSION   WP_258076486
VERSION     WP_258076486.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 691)
  AUTHORS   Price,C., Lingner,J., Bickle,T.A., Firman,K. and Glover,S.W.
  TITLE     Basis for changes in DNA recognition by the EcoR124 and EcoR124/3
            type I DNA restriction and modification enzymes
  JOURNAL   J Mol Biol 205 (1), 115-125 (1989)
   PUBMED   2784505
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023433.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12008.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..691
                     /product="type I restriction endonuclease subunit R,
                     EcoR124 family"
     Region          <9..577
                     /region_name="COG0610"
                     /note="Type I site-specific restriction-modification
                     system, R (restriction) subunit and related helicases ...
                     [Defense mechanisms]"
                     /db_xref="CDD:440375"
ORIGIN      
        1 qnilyslidi detdnvkdli kkllsddrtv ivttiqkmnh vmrrfsdkeg tkrftqltql
       61 rvafvvdech ravspakkke ieeffvqslw ygftgtpifv enarkeignl prttkqqyge
      121 clheytvkea ihdnavlgfq veykstfsee eldktiiald nsgeldpdtl evaekearlp
      181 kkvyendnhm levihsiink srkklgfakg vgqtynailt tssiaqaqry ydlikavkke
      241 essvkideat krvlpdfpkv aitysisene easisnqekm kesikdynqe fgtnftletm
      301 raynrnindr larkkekyla rseqldlviv vdrlltgfda pclstlfidr apmqlheliq
      361 efsrtnrlfd kskkygqivt fqtpkifeqk vkealilysn ggedevlapt wleakerfve
      421 aseqlieims dpvnaqidnl nkadlkkfvk afqkfdktft aiqvysefds tqmgtefpis
      481 ideveiyhgn yvnalellka eiddgndpev eidieyeles ikteeinyey ilmliqafvp
      541 sgnteyelfa kedkkateei drylndlekt npqiarlmrs lwkdilidpe nyrdknvshl
      601 leemiqakqy aaikdfsdkw hveeeelayv vanynvkkek qsgeselkqs adyegykast
      661 ekplsklkyw ktvrndfenv mknqilplqr r
//
LOCUS       WP_258076497             169 aa            linear   BCT 02-MAR-2025
DEFINITION  Gfo/Idh/MocA family oxidoreductase, partial [Neisseria
            gonorrhoeae].
ACCESSION   WP_258076497
VERSION     WP_258076497.1
KEYWORDS    RefSeq.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (residues 1 to 169)
  AUTHORS   Kingston,R.L., Scopes,R.K. and Baker,E.N.
  TITLE     The structure of glucose-fructose oxidoreductase from Zymomonas
            mobilis: an osmoprotective periplasmic enzyme containing
            non-dissociable NADP
  JOURNAL   Structure 4 (12), 1413-1428 (1996)
   PUBMED   8994968
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014893.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02894.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Neisseria gonorrhoeae"
                     /db_xref="taxon:485"
     Protein         <1..169
                     /product="Gfo/Idh/MocA family oxidoreductase"
     Region          <1..169
                     /region_name="PRK10206"
                     /note="putative oxidoreductase; Provisional"
                     /db_xref="CDD:182305"
ORIGIN      
        1 vhtmnqiisl fgrpdhvsyd irslrnkanp ddtfeaqlfy gdlkaivkts hyvkidypkf
       61 tvhgkkgsfi kygidqqets lkagimpgep gfaadesigh leyvnaqget vreeikpevg
      121 dygrvydaly dtlvngapny vresdvltnl eilergfeqa spatvtlak
//
LOCUS       WP_258076632             338 aa            linear   BCT 02-MAR-2025
DEFINITION  L,D-transpeptidase family protein [Methylobacter tundripaludum].
ACCESSION   WP_258076632
VERSION     WP_258076632.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter tundripaludum
  ORGANISM  Methylobacter tundripaludum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
REFERENCE   1  (residues 1 to 338)
  AUTHORS   Biarrotte-Sorin,S., Hugonnet,J.E., Delfosse,V., Mainardi,J.L.,
            Gutmann,L., Arthur,M. and Mayer,C.
  TITLE     Crystal structure of a novel beta-lactam-insensitive peptidoglycan
            transpeptidase
  JOURNAL   J Mol Biol 359 (3), 533-538 (2006)
   PUBMED   16647082
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015679.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03734.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Methylobacter tundripaludum"
                     /db_xref="taxon:173365"
     Protein         1..338
                     /product="L,D-transpeptidase family protein"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=37170
     Region          2..318
                     /region_name="PRK10260"
                     /note="L,D-transpeptidase; Provisional"
                     /db_xref="CDD:182341"
ORIGIN      
        1 mmkirslfav lillsagngv ahattyalpe nsndsvitqf hddvpltrae qdetlldvar
       61 rfllgqaeiv rlnpdvdrwh ikkdeivrlp nkrilpdtph egitlniaey rmyyyppvqk
      121 gvapqvmsya hgvgrqdwkt pmgktsivqk vkdpawhppe sirrehaang dplpavvppg
      181 phnplgaykm hlavpggyli hgtdidkiyg igmqithgcv rmypedieal ynsvpvgtpv
      241 yivkqpikvg wldntlyiea hpdlegeett laqkvdtalk liqkaamtas apaqnppefd
      301 raalnkalta ldgnpvalyq rlpqpvslsa tghapiir
//
LOCUS       WP_258076641             369 aa            linear   BCT 02-MAR-2025
DEFINITION  protoglobin domain-containing protein [Methylobacter
            tundripaludum].
ACCESSION   WP_258076641
VERSION     WP_258076641.1
KEYWORDS    RefSeq.
SOURCE      Methylobacter tundripaludum
  ORGANISM  Methylobacter tundripaludum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylobacter.
REFERENCE   1  (residues 1 to 369)
  AUTHORS   Nardini,M., Pesce,A., Thijs,L., Saito,J.A., Dewilde,S., Alam,M.,
            Ascenzi,P., Coletta,M., Ciaccio,C., Moens,L. and Bolognesi,M.
  TITLE     Archaeal protoglobin structure indicates new ligand diffusion paths
            and modulation of haem-reactivity
  JOURNAL   EMBO Rep 9 (2), 157-163 (2008)
   PUBMED   18188182
REFERENCE   2  (residues 1 to 369)
  AUTHORS   Zhang,W. and Phillips,G.N. Jr.
  TITLE     Structure of the oxygen sensor in Bacillus subtilis: signal
            transduction of chemotaxis by control of symmetry
  JOURNAL   Structure 11 (9), 1097-1110 (2003)
   PUBMED   12962628
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022995.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11563.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Methylobacter tundripaludum"
                     /db_xref="taxon:173365"
     Protein         1..369
                     /product="protoglobin domain-containing protein"
                     /GO_function="GO:0019825 - oxygen binding [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=42158
     Region          20..167
                     /region_name="GS_GGDEF_1"
                     /note="Globin sensor domain, coupled to DGC/GGDEF domains;
                     uncharacterized subgroup; cd14758"
                     /db_xref="CDD:381272"
     Site            order(27..29,59,117..119,121..122,125,128,149..150,
                     153..154,157,161)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381272"
     Site            order(66,69,79,82..83,86,106,109..110,115,119,123..124,
                     163)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:381272"
     Region          91..354
                     /region_name="GGDEF"
                     /note="GGDEF domain, diguanylate cyclase (c-di-GMP
                     synthetase) or its enzymatically inactive variants [Signal
                     transduction mechanisms]; COG2199"
                     /db_xref="CDD:441801"
ORIGIN      
        1 melkqtdqtl leqmritefd idnrkallal snedvnllkd yrpiiesrvd alvdtfyqmq
       61 tnvaeialli gdadtldrlk naqrryvldl fsgiydleyv nnrlriglvh krigvepkly
      121 laainvlksl lleiifetlp ekterqamla aldklllfdi tlvfetyirs lvseieiska
      181 kseryacvle ekvkertqql eeltridslt gllsvrylne tltrtlrtaq rrhepvsivy
      241 mdinefkain dtqghphgdh ilravgaaik kisreedccf ryggdefcli lpnceeepar
      301 eiyinrlnie isrclknvtl svgivqtgpd kygepdalir qsdeemyaak kaskiddrsg
      361 navdvekta
//
LOCUS       WP_258076748             794 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerophosphodiester phosphodiesterase family protein
            [Enterococcus faecalis].
ACCESSION   WP_258076748
VERSION     WP_258076748.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 794)
  AUTHORS   Kim,H. and Farrand,S.K.
  TITLE     Characterization of the acc operon from the nopaline-type Ti
            plasmid pTiC58, which encodes utilization of agrocinopines A and B
            and susceptibility to agrocin 84
  JOURNAL   J Bacteriol 179 (23), 7559-7572 (1997)
   PUBMED   9393724
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03009.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..794
                     /organism="Enterococcus faecalis"
                     /db_xref="taxon:1351"
     Protein         1..794
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /GO_function="GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=87425
     Region          <19..117
                     /region_name="ATP-synt_Fo_b"
                     /note="F-type ATP synthase, membrane subunit b; cl21478"
                     /db_xref="CDD:473877"
     Region          445..673
                     /region_name="GDPD_like_2"
                     /note="Glycerophosphodiester phosphodiesterase domain of
                     uncharacterized bacterial glycerophosphodiester
                     phosphodiesterases; cd08582"
                     /db_xref="CDD:176524"
     Site            order(448,473,475,488,551,582,652)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176524"
     Site            order(448,488)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176524"
     Site            order(473,475,551)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:176524"
ORIGIN      
        1 maieqiketd tlnqgrikin aildqsnast ekvdayqeel kngindakki adtagkeair
       61 iaeeagnqan etanqamans qtaintsnqa vstannnkqe fdalrndfdk lvgeagdsnp
      121 eivqartdtq gvtrttlaar lqsdfndrmt ktegvsllsg itnvkvpmdf ngktagntat
      181 nankyftdvt akslkkpkdt wnevsqtdyn klvsrndsgv ssgstqngii pqqlgefnal
      241 eaakrlvpql fkdlnldesv kllknnfvsf tiservkass pnnktikvst yiestdswst
      301 qiqepvdeyk dlsiqvtdnn fitsdgiiyi inytdpsngv ttstldvdyv siqfeisida
      361 qsvleksgfi kekrlnehie dnsnphkvts aqvglgnvdn yntatqssae kgesntefmt
      421 pfttkkyyln etkthrqrwk eglnwiahrg nnteypensi pafktvrrhw gietdiqvts
      481 dgqwvvmhde tvdrttngtg kvssmtlsqf rnlridagan vsklsdeeri pptlddylsi
      541 ckqinkvpii eiknneysta nyallkdtln lygfdefncv igsfsyavln virsmypnme
      601 lhyfvneint nvinelknls ipavcscifn nasvnstnvk nlhslgmkig twtvpenkfa
      661 dmtklgidyi ttnslsgnqk yaklsyqngf vdnqgitdas yveelvgggi hinfnvekgg
      721 ntqntvianl pdwaiplksq ysqcgirtss gvalgtfdir grtvptgvva gtlsvglnws
      781 grsswaagst vyav
//
LOCUS       WP_258076749             473 aa            linear   BCT 02-MAR-2025
DEFINITION  GH25 family lysozyme, partial [Enterococcus faecalis].
ACCESSION   WP_258076749
VERSION     WP_258076749.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 473)
  AUTHORS   Moroz,O.V., Blagova,E., Taylor,E., Turkenburg,J.P., Skov,L.K.,
            Gippert,G.P., Schnorr,K.M., Ming,L., Ye,L., Klausen,M., Cohn,M.T.,
            Schmidt,E.G.W., Nymand-Grarup,S., Davies,G.J. and Wilson,K.S.
  TITLE     Fungal GH25 muramidases: New family members with applications in
            animal nutrition and a crystal structure at 0.78A resolution
  JOURNAL   PLoS One 16 (3), e0248190 (2021)
   PUBMED   33711051
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 473)
  AUTHORS   Martinez-Fleites,C., Korczynska,J.E., Davies,G.J., Cope,M.J.,
            Turkenburg,J.P. and Taylor,E.J.
  TITLE     The crystal structure of a family GH25 lysozyme from Bacillus
            anthracis implies a neighboring-group catalytic mechanism with
            retention of anomeric configuration
  JOURNAL   Carbohydr Res 344 (13), 1753-1757 (2009)
   PUBMED   19595298
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013357.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01183.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Enterococcus faecalis"
                     /db_xref="taxon:1351"
     Protein         1..>473
                     /product="GH25 family lysozyme"
                     /GO_function="GO:0003796 - lysozyme activity [Evidence
                     IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /GO_process="GO:0016998 - cell wall macromolecule
                     catabolic process [Evidence IEA]"
     Region          164..363
                     /region_name="GH25_AtlA-like"
                     /note="AtlA is an autolysin found in Gram-positive lactic
                     acid bacteria that degrades bacterial cell walls by
                     catalyzing the hydrolysis of 1,4-beta-linkages between
                     N-acetylmuramic acid and N-acetyl-D-glucosamine residues.
                     This family includes the AtlA and Aml...; cd06522"
                     /db_xref="CDD:119382"
     Site            order(168,195,224,226,260,262,295,317,339,358)
                     /site_type="active"
                     /db_xref="CDD:119382"
     Region          381..445
                     /region_name="DUF5776"
                     /note="Domain of unknown function (DUF5776); pfam19087"
                     /db_xref="CDD:465973"
ORIGIN      
        1 mkkiisgmli ctvllnsfsv iasgeelvkt ettgeaglvt qatseittns tedtssvtee
       61 ntserdssas stkeetldss tnstteghss vsetnttdsk teesqsseve kktinqdead
      121 yqeaaregtn hkkgtyamkn gissrvarat vanvyandpn lpgknfidvs swngdisvae
      181 yqkiksygvt gvsvkltegt wyvnpyaagq irnakaaglk vsayhysmyv saataqdear
      241 yfaqaaansg ldkntimfnd aedptltnng rnahansiaf nqqlkalgyk ndalyvgkww
      301 ltagyidtsa fgrdrvwvaq ypytpdssmq wnndhgawqw ssqmyfpgla nyegrpfdis
      361 mtysnfldmg nnssgpdlsk yyttnpgrvv vmkdetfynn adftskgtav kkntlvevqg
      421 ieysstgypr lvtpqgylta rkdivlaais nidkyytanp grvvvmkdet fyn
//
LOCUS       WP_258076750             813 aa            linear   BCT 02-MAR-2025
DEFINITION  SpaA isopeptide-forming pilin-related protein, partial
            [Enterococcus faecalis].
ACCESSION   WP_258076750
VERSION     WP_258076750.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 813)
  AUTHORS   Kang,H.J., Paterson,N.G., Gaspar,A.H., Ton-That,H. and Baker,E.N.
  TITLE     The Corynebacterium diphtheriae shaft pilin SpaA is built of tandem
            Ig-like modules with stabilizing isopeptide and disulfide bonds
  JOURNAL   Proc Natl Acad Sci U S A 106 (40), 16967-16971 (2009)
   PUBMED   19805181
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2009 Oct 27;106(43):18427]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037639.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17802.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Enterococcus faecalis"
                     /db_xref="taxon:1351"
     Protein         1..>813
                     /product="SpaA isopeptide-forming pilin-related protein"
     Region          318..>761
                     /region_name="ClfA"
                     /note="Clumping factor A-related surface protein, MSCRAMM
                     (microbial surface components recognizing adhesive matrix
                     molecules) family, DEv-IgG fold [Cell
                     wall/membrane/envelope biogenesis]; COG4932"
                     /db_xref="CDD:443959"
     Region          728..796
                     /region_name="SpaA"
                     /note="Prealbumin-like fold domain; pfam17802"
                     /db_xref="CDD:465513"
ORIGIN      
        1 mkkiinklfs icliiftiig sntsivsyam nnesgtqirs iaveypeekt eivatkdwat
       61 vslalsisel tkgevltlkm asekysysmt pfeigdalqv ipnddgtwti kalqtitdys
      121 anlqlklryn qnlsedfedq vvftfgdsqk ivkinigqyv ekvpptelvr kvplgftseg
      181 riawviyfny nqaglsgsek ttfkfldnvg pnqtlavdsi aayltkqpil evngemirnl
      241 ehdeysydas qffqkyases gfnyeaekfe giptatgsyl snknayyiyl etipnenips
      301 dallsnytym risnegfdaw edediayita densggtgqg gvilekidaa taevlqgaif
      361 klvnkktqqv vqenlrtnqs gqirlaglep glyelietra ptgykldatp vpfeiktgqt
      421 qtirlkkent rlenqlkvek vdenneakrl agaefslydq kdnliakgvt nengellfsn
      481 lspdgeyylv etkapngyel ddtkhpisfa gktdytltyr vknkqqvqtg sikivkqdkd
      541 skkrlagaef qwkdtvtgkt givtvgtdgt vtipnlavnr tyeitetkap tgyvldktvh
      601 kvtlttaqan kvvtvtvdnv aqkgsikivk qdkdskkrlt gaefqwkdtv tgktgtvtvg
      661 tdgtvtipnl svnrtyeite tkaptgyvld ktvhkvtltt aqankvvtvt vdnvaqkgsi
      721 kivkqdkdsk krltgaefqw kdtvtgntgi vtvgtdgtvt ipnlavnrty eitetkaptg
      781 yvldktvhkv tlttaqankv vtvtvdnvaq kgs
//
LOCUS       WP_258076770             103 aa            linear   BCT 02-MAR-2025
DEFINITION  YajG family lipoprotein, partial [Klebsiella pneumoniae].
ACCESSION   WP_258076770
VERSION     WP_258076770.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015858.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03923.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..103
                     /product="YajG family lipoprotein"
     Region          <1..103
                     /region_name="Lipoprotein_16"
                     /note="Uncharacterized lipoprotein; cl19472"
                     /db_xref="CDD:473174"
ORIGIN      
        1 srgymvgpsg avdlqiivnn lyadvsqgnv ryniatkadi aiiatakngn kmtknyrasy
       61 svegafqasn kniadavnsv ltdtisdmaq dtsihdfikq nar
//
LOCUS       WP_258076788             148 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_258076788
VERSION     WP_258076788.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 148)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>148
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..>147
                     /region_name="entF"
                     /note="enterobactin non-ribosomal peptide synthetase EntF;
                     PRK10252"
                     /db_xref="CDD:236668"
ORIGIN      
        1 pgiwmaekls dlpsawsvah yveltgdvda pllaravvvg laqadtlrmr ftedngevwq
       61 wvddalifel peiidlrtni dphgtaqalm ladlqqdlrv dsgkplvfhq lihvadnrwy
      121 wyqryhhllv dgfsfpaitr qianiyct
//
LOCUS       WP_258076820             947 aa            linear   BCT 02-MAR-2025
DEFINITION  N-6 DNA methylase [Enterococcus faecalis].
ACCESSION   WP_258076820
VERSION     WP_258076820.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 947)
  AUTHORS   Schouler,C., Gautier,M., Ehrlich,S.D. and Chopin,M.C.
  TITLE     Combinational variation of restriction modification specificities
            in Lactococcus lactis
  JOURNAL   Mol Microbiol 28 (1), 169-178 (1998)
   PUBMED   9593305
REFERENCE   2  (residues 1 to 947)
  AUTHORS   Schouler,C., Clier,F., Lerayer,A.L., Ehrlich,S.D. and Chopin,M.C.
  TITLE     A type IC restriction-modification system in Lactococcus lactis
  JOURNAL   J Bacteriol 180 (2), 407-411 (1998)
   PUBMED   9440532
REFERENCE   3  (residues 1 to 947)
  AUTHORS   Thorpe,P.H., Ternent,D. and Murray,N.E.
  TITLE     The specificity of sty SKI, a type I restriction enzyme, implies a
            structure with rotational symmetry
  JOURNAL   Nucleic Acids Res 25 (9), 1694-1700 (1997)
   PUBMED   9108149
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02384.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..947
                     /organism="Enterococcus faecalis"
                     /db_xref="taxon:1351"
     Protein         1..947
                     /product="N-6 DNA methylase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=108449
     Region          440..761
                     /region_name="YtxK"
                     /note="Adenine-specific DNA N6-methylase [Replication,
                     recombination and repair]; COG0827"
                     /db_xref="CDD:440589"
ORIGIN      
        1 mhkysideql cihgqrpqak yladfdtwir igrfvkrgqk aicalrfned rvqglyffdv
       61 sqtygkkidf pdytlseqey sqlftieqvk skiaeiqnys hlsqaenrla evigkeliry
      121 ktiqsftksi ewnvdlqdln kfvpimqvan emnrvvskei lllkqeermn sneydiqger
      181 swstdssshi srqqttgeir ensgrefees kqigirdknd grqldelrpr ngtknvesnq
      241 rigesirtts avdertterl ddrnentksv sptsdgssne gttqldertt erlddrnent
      301 ksvsptsdgs snegttqlde ntamsllkee llqgtgtehg kyrvvhffnn vksqslrikf
      361 lkdeygyygh agpnqphvsy sskgvsiddi qyswkqvtqt ldeliltnqy liggetigyq
      421 qyrstldddt fikqnetknn senseqelsl fdfssdnves envsdttmig sssleeeqal
      481 qetgqafyfp etehfydtkp kekirnniaa irlskkiqke nrlatpeeqv ilakyvgwgg
      541 iakvfdtrsd nyekereelr slvtekqykq mresvltayy tdpmiikamy qkvqafgftg
      601 gkildpamgt gnffsalpdt lkdqselhgi eldevtgtia kqlhpeadik ikgfeevgpl
      661 tdqydlvisn vpfdqqkvtd sqferrysih nyflrkaids vhdggivaii tstntldnlt
      721 gdilldvske akllgaarlp nnafkkiagt evttdilffq kdvswaatqa yspnwcfvkt
      781 gkqgaiwynn yyhdhpeqvc gqfeirhhhg ntlsvvssgt pldvqlkqvf eriegryfge
      841 rkiveeieka divekeplsi deiplfthel idnqiyynds neivkvdvsg kafdkmkrli
      901 dirntlldvi aiqrevdydt etlkelqekl nqsydsfvek ygsinen
//
LOCUS       WP_258076838             486 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: polymorphic toxin-type HINT domain-containing protein
            [Thermobifida].
ACCESSION   WP_258076838
VERSION     WP_258076838.1
KEYWORDS    RefSeq.
SOURCE      Thermobifida
  ORGANISM  Thermobifida
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Nocardiopsidaceae.
REFERENCE   1  (residues 1 to 486)
  AUTHORS   Zhang,D., Iyer,L.M. and Aravind,L.
  TITLE     A novel immunity system for bacterial nucleic acid degrading toxins
            and its recruitment in various eukaryotic and DNA viral systems
  JOURNAL   Nucleic Acids Res 39 (11), 4532-4552 (2011)
   PUBMED   21306995
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019227.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07591.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Thermobifida"
                     /db_xref="taxon:83677"
     Protein         1..486
                     /product="polymorphic toxin-type HINT domain-containing
                     protein"
                     /calculated_mol_wt=52351
     Region          173..310
                     /region_name="PT-HINT"
                     /note="Pretoxin HINT domain; pfam07591"
                     /db_xref="CDD:400120"
     Region          339..479
                     /region_name="Toxin-deaminase"
                     /note="The BURPS668_1122 family of deaminases; pfam14424"
                     /db_xref="CDD:464170"
ORIGIN      
        1 mdtisqglkd vgtgiwdaga dfvtgikdda vglwegakkl wnapgqwfsd akdsivegak
       61 ntwnqvttdp ggffldllvs devqedwkng dkthavaqgi aenliglipg vgwykkgnra
      121 lnvmggkdrg settpgpvra dgdqpgdnrr sddettrppa rpcrgnsfvp gtlvlladgt
      181 yapietitvg ddvwafdprt gtegprtvtd lhtshstttl veltvddgte hggvvvatda
      241 hpfwvpslat wvaaidlepg twlrtsagtw vqvravavrt aeaqrvhnlt vadlhtyyva
      301 agaadalvhn eagcidkshp ieveagpeaa qewrkrweeq gqalshrrnv avadiridgf
      361 nagqlvsvsg qngrpgtvel panprytpkp dinrdgsvgn treyeterki lehvaqqlnp
      421 rnpdgsitap rtditgeihl ytelppchsc grapsgddpg giieqfkref pnidvkvtyg
      481 dgqtyp
//
LOCUS       WP_258076858             350 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: methyltransferase domain-containing protein
            [Thermobifida].
ACCESSION   WP_258076858
VERSION     WP_258076858.1
KEYWORDS    RefSeq.
SOURCE      Thermobifida
  ORGANISM  Thermobifida
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Nocardiopsidaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025033.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13649.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Thermobifida"
                     /db_xref="taxon:83677"
     Protein         1..350
                     /product="methyltransferase domain-containing protein"
                     /calculated_mol_wt=38133
     Region          10..334
                     /region_name="methyltr_grsp"
                     /note="methyltransferase, ATP-grasp peptide maturase
                     system; TIGR04188"
                     /db_xref="CDD:275041"
ORIGIN      
        1 mtetlvstvv eqvprhrfip driwdgtepv drtqtpdrww qlvdadtavv tqidegrvgg
       61 mgvptssssa psvvaamlda ldvqpgqqvl eigtgtgwna allcelvgda drvttievdp
      121 vvaaqarkal gaagyevrvv vgdgaegfpa lapydriiat cavwevphaw ltqvrdggii
      181 vtpwspqrfg phgalarlqv rdgaaegrfl qeaafmwlrs qrwsggpphd leadpeetrm
      241 vdggqellad ttvmlpltlm vphwnyglrs sadglvmlls atdspswarv ypdrveqggp
      301 rrlweeleqa hawwvqrgrp evsefgltvg pqghvvwles pdgpswqhvv
//
LOCUS       WP_258076862             436 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: lytic polysaccharide monooxygenase [Thermobifida].
ACCESSION   WP_258076862
VERSION     WP_258076862.1
KEYWORDS    RefSeq.
SOURCE      Thermobifida
  ORGANISM  Thermobifida
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Nocardiopsidaceae.
REFERENCE   1  (residues 1 to 436)
  AUTHORS   Forsberg,Z., Mackenzie,A.K., Sorlie,M., Rohr,A.K., Helland,R.,
            Arvai,A.S., Vaaje-Kolstad,G. and Eijsink,V.G.
  TITLE     Structural and functional characterization of a conserved pair of
            bacterial cellulose-oxidizing lytic polysaccharide monooxygenases
  JOURNAL   Proc Natl Acad Sci U S A 111 (23), 8446-8451 (2014)
   PUBMED   24912171
REFERENCE   2  (residues 1 to 436)
  AUTHORS   Schnellmann,J., Zeltins,A., Blaak,H. and Schrempf,H.
  TITLE     The novel lectin-like protein CHB1 is encoded by a chitin-inducible
            Streptomyces olivaceoviridis gene and binds specifically to
            crystalline alpha-chitin of fungi and other organisms
  JOURNAL   Mol Microbiol 13 (5), 807-819 (1994)
   PUBMED   7815940
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015054.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03067.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Thermobifida"
                     /db_xref="taxon:83677"
     Protein         1..436
                     /product="lytic polysaccharide monooxygenase"
                     /calculated_mol_wt=46367
     Region          1..277
                     /region_name="COG3397"
                     /note="Predicted carbohydrate-binding protein, contains
                     CBM5 and CBM33 domains [General function prediction only]"
                     /db_xref="CDD:442624"
     Region          <234..>329
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          333..433
                     /region_name="CBM_2"
                     /note="Cellulose binding domain; pfam00553"
                     /db_xref="CDD:425748"
ORIGIN      
        1 mrsrlaafga lagltatlaa vtpaedayah gamtypptrs yicyvngieg gqggniaptn
       61 pacqnllaen gnypfynwfg nlisdaggrh reiipdgqlc gpnpqfsgln lvsehwpttt
      121 lvagstitfq ynawaphpgt wylyvtkdgw dpnsplgwdd lepvpfhtvt dppirpggpe
      181 gpeyywdatl pnksgrhiiy siwqrsdspe afydctdvvf vgggddggsg gpqpdteapt
      241 apgtpvagsl ngtsaqiswp aatdnvgvae yrvynaande llattrttsv tltgltpntd
      301 ysiyvvarda agntsspsat ltfnsgdapa laceieystp ntwyggftaq vriyngshes
      361 idgweltwdf tngetinqaw nataqqsgtt vtvtnvswns tiphhgsvef gfnanstrep
      421 gvpenfklng slcsva
//
LOCUS       WP_258076864             815 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6049 family protein [Thermobifida].
ACCESSION   WP_258076864
VERSION     WP_258076864.1
KEYWORDS    RefSeq.
SOURCE      Thermobifida
  ORGANISM  Thermobifida
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Nocardiopsidaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039636.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19516.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Thermobifida"
                     /db_xref="taxon:83677"
     Protein         1..815
                     /product="DUF6049 family protein"
                     /calculated_mol_wt=86115
     Region          6..723
                     /region_name="DUF6049"
                     /note="Family of unknown function (DUF6049); pfam19516"
                     /db_xref="CDD:437348"
ORIGIN      
        1 mrriahlgvv vatafavlpa ltplqpsppa qavtesmpgt atilpvddvr elpslalsdi
       61 tsvvakkkdt vtvkglvtnt tdatldgitv rlrynpyplt grdaldrhad gagpepyasg
      121 psttidtplp pgsaisftlr ttvkdldfqg gfgvypltis aatesgddlg tlrtfvvytg
      181 aekmtklqva wvwplmdrpq radddtylta dlaaeitkdg rlgrlltiga qdgeidstyt
      241 gptpqpeeed avtdladata splgdpsasp atavetetqp gptpedtpsp adpvpitwav
      301 dpallddihr lgegsywslt natesgpvle eheasvdaqv wlaharlwla edpllavpya
      361 npdlpallda dlsgdaetav elgrstvael lgreadtela wpangvmdea trdflnshga
      421 ttflldesam paknwlghtp ggvaplplag geegtalvvd rgltrilgan thtpgastla
      481 tqrfvaetam iaaeapdkrr tlilappqdw dpdpayatgl ldateqapwl savpltsvda
      541 daadaedrqg ltypkkaaea elsadhveri rkirrqvrlf nsvltedadp frpavlrles
      601 awwredteva eaildrvdqa vqehkakihv ipgdpitlas kngtlgvmva ndlsdhsvtv
      661 hlsifsense rlsigdytks meigpggktt vyvplsatvn grtvlhlslh nadgepitde
      721 pttipvnatg lgsgallisg iaalvlvval apravrkwrr dqarktqaai dataaaqeds
      781 laavtgerad dtdshsppgp vkpdqdgesa eears
//
LOCUS       WP_258076885             431 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: amidohydrolase family protein [Thermobifida].
ACCESSION   WP_258076885
VERSION     WP_258076885.1
KEYWORDS    RefSeq.
SOURCE      Thermobifida
  ORGANISM  Thermobifida
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Nocardiopsidaceae.
REFERENCE   1  (residues 1 to 431)
  AUTHORS   Gao,G., Nara,T., Nakajima-Shimada,J. and Aoki,T.
  TITLE     Novel organization and sequences of five genes encoding all six
            enzymes for de novo pyrimidine biosynthesis in Trypanosoma cruzi
  JOURNAL   J Mol Biol 285 (1), 149-161 (1999)
   PUBMED   9878395
REFERENCE   2  (residues 1 to 431)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
REFERENCE   3  (residues 1 to 431)
  AUTHORS   Nygaard,P., Duckert,P. and Saxild,H.H.
  TITLE     Role of adenine deaminase in purine salvage and nitrogen metabolism
            and characterization of the ade gene in Bacillus subtilis
  JOURNAL   J Bacteriol 178 (3), 846-853 (1996)
   PUBMED   8550522
REFERENCE   4  (residues 1 to 431)
  AUTHORS   Lollier,M., Jaquet,L., Nedeva,T., Lacroute,F., Potier,S. and
            Souciet,J.L.
  TITLE     As in Saccharomyces cerevisiae, aspartate transcarbamoylase is
            assembled on a multifunctional protein including a
            dihydroorotase-like cryptic domain in Schizosaccharomyces pombe
  JOURNAL   Curr Genet 28 (2), 138-149 (1995)
   PUBMED   8590465
REFERENCE   5  (residues 1 to 431)
  AUTHORS   Jabri,E., Carr,M.B., Hausinger,R.P. and Karplus,P.A.
  TITLE     The crystal structure of urease from Klebsiella aerogenes
  JOURNAL   Science 268 (5213), 998-1004 (1995)
   PUBMED   7754395
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01979.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Thermobifida"
                     /db_xref="taxon:83677"
     Protein         1..431
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=44820
     Region          5..427
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
     Site            order(62,64,185,234,314)
                     /site_type="active"
                     /db_xref="CDD:238617"
ORIGIN      
        1 mrqydlvirs rravtptsvg paavavadgr iaavadyfdd lpsrkevdlg etallpgmvd
       61 vdaavqapgq llsqgyartt raaaaggitt lvvapapaqp aitstealra hlhasasnsa
      121 thvaflggit prsssaelad lrangvigfa cslsdelmgl palddihlsk smaevaamdv
      181 pivvhaedan elgtvvgpgn sallaarppr aerrglervl aaarssgarv hispfvaaec
      241 aailaaardi gipvsaqtcp hylclpaehv pdtdpsyrcr pplrsdanrq alwnallhga
      301 esfgdvivds vgsgnrpgtg isairwtlpa lwtaaqkrgc glaeltqwta qrpaelmgla
      361 tkgriqvgyd adlvafepdt fqrvpasdgg pyrgrrlqgr vtgtwlcgip vpsdadndps
      421 prggpllsay r
//
LOCUS       WP_258076895             244 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Thermobifida fusca].
ACCESSION   WP_258076895
VERSION     WP_258076895.1
KEYWORDS    RefSeq.
SOURCE      Thermobifida fusca
  ORGANISM  Thermobifida fusca
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Nocardiopsidaceae; Thermobifida.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Thermobifida fusca"
                     /db_xref="taxon:2021"
     Protein         1..244
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=24810
     Region          <16..188
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mafavflvve rkvshplvdl dvmrrrnvwa anlvtllatt ghgvmfflvp qivqlpkssg
       61 vglgvdvdhs glfllpgavl lifagpltgr lvarfgtrlp lalgvalgca glvilaagss
      121 qpvalltgga vlglaggvty atlpmliads vpltdlgsan gvntivrhvs mavsaqlaaa
      181 lvvssipass pypqwwafta nygaaavlaa lalipigllr prqtaapdpv gehdaaaptt
      241 pqir
//
LOCUS       WP_258076900             757 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: GmrSD restriction endonuclease domain-containing
            protein [Thermobifida].
ACCESSION   WP_258076900
VERSION     WP_258076900.1
KEYWORDS    RefSeq.
SOURCE      Thermobifida
  ORGANISM  Thermobifida
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Nocardiopsidaceae.
REFERENCE   1  (residues 1 to 757)
  AUTHORS   Gao,H., Gong,X., Zhou,J., Zhang,Y., Duan,J., Wei,Y., Chen,L.,
            Deng,Z., Wang,J., Chen,S., Wu,G. and Wang,L.
  TITLE     Nicking mechanism underlying the DNA phosphorothioate-sensing
            antiphage defense by SspE
  JOURNAL   Nat Commun 13 (1), 6773 (2022)
   PUBMED   36351933
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 757)
  AUTHORS   Picton,D.M., Luyten,Y.A., Morgan,R.D., Nelson,A., Smith,D.L.,
            Dryden,D.T.F., Hinton,J.C.D. and Blower,T.R.
  TITLE     The phage defence island of a multidrug resistant plasmid uses both
            BREX and type IV restriction for complementary protection from
            viruses
  JOURNAL   Nucleic Acids Res 49 (19), 11257-11273 (2021)
   PUBMED   34657954
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015210.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03235.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Thermobifida"
                     /db_xref="taxon:83677"
     Protein         1..757
                     /product="GmrSD restriction endonuclease domain-containing
                     protein"
                     /calculated_mol_wt=85015
     Region          3..519
                     /region_name="COG3472"
                     /note="Uncharacterized conserved protein domain, often
                     C-terminal to DUF262 [Function unknown]"
                     /db_xref="CDD:442695"
ORIGIN      
        1 mstlldqids gtillpefqr gyvwnrdqvr glmrslyrgy pvgslllwet aatdvaargg
       61 tvgdgrthlm lldgqqrits lygvirgrpp affegdakaf tglyfhvede vfefysrskm
      121 asdprwvnvt elfqqgpvpy larftdapse latiylqrln rlhqvteref pqekitgadk
      181 eidevvdifn rvnssgtkls kgdlalaklc aqwmearskm realrrwera gyrfdldwll
      241 rtvtavatgr sqfealerlk asefkaalek tvahvdtfln tvsgrlgldh drvlpgrysi
      301 mvvvrlleln ngsftdgvhr dktlywyihs alwgryygsa esnlqqdlet laregidgli
      361 sslervrggs ltirphdfeg atkgsrfypv lymlsrvkga rdfgtglelk aetlgkfssl
      421 eihhvfpkpl lyngydrkhv naianfcflt pqskleignr speeylpeve arhpgvlasq
      481 wiptdpalwk leryrdflfa rrellaeaaq sfleelrsgt asanetvlrp isvvteksdd
      541 aravqvreli eelqrmgyse plvdtevpdp etgraiavae afwpeglqag qgapvvleld
      601 pgeadlprlk elgyevftsv dallgyvkrr nadaagerlv epetvaaepr eenepllrel
      661 glalrslydr ardeagytps qllsmiadlg plgaarrllh aptvsdgfsa lwergrldlt
      721 veavvceprf aplfteeele tarrrlnqfg ysvdsaa
//
LOCUS       WP_258076949             168 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF624 domain-containing protein, partial [Enterococcus faecium].
ACCESSION   WP_258076949
VERSION     WP_258076949.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016726.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04854.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..168
                     /product="DUF624 domain-containing protein"
ORIGIN      
        1 ifsllfigpg civmigmtee lakeksfspv rlfiktfrqf wlkgffywlf awivsvimif
       61 dcfffirfsy gkwliplfvl laclsvsfsi ncwyfqvrnp askpnqvlri afyytlkkwy
      121 vslldflllt slflfffvkp qwcillgpsi vfgliyfnnr klmrtmdl
//
LOCUS       WP_258076977             439 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Xanthomonas
            arboricola].
ACCESSION   WP_258076977
VERSION     WP_258076977.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 439)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..>439
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          42..439
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation (C) domain of non-ribosomal
                     peptide synthetases(NRPSs) and similar domains including
                     the C-domain of SgcC5, a free-standing NRPS with both
                     ester- and amide- bond forming activity; cd19531"
                     /db_xref="CDD:380454"
ORIGIN      
        1 mteslderqr lmqaillnrt rratrtrdad ddaivarprd aelplslaqr rlwflcqlda
       61 tasaayhmpv slrlegeldv avlrtaldal varheslrtr flardgepeq vidpadrgfa
      121 lrefdvsllp aderaeavaa htceaaavpf dlaagplvrg rllrldahth vllltqhhii
      181 sdgwsvgvlv gelgvlyraf aegaanplpa lalqyadyaa wqhsqlagea wqrqidhwkq
      241 tlsgapslle lptdrprppv qsyrgaslpl rlepelvqal rswssrhgat lfmaltagwa
      301 allsrlggqe evvigtpvan rpraelegla gffvntlalr vpvdgmadaa tllmqvkaqa
      361 ldafahqqlp fdqvvehvrp erslghspvf qtmlalnntp garelslpgv rlqpqpqprt
      421 ttqfdlslal nehagaltg
//
LOCUS       WP_258075372             114 aa            linear   BCT 02-MAR-2025
DEFINITION  WecB/TagA/CpsF family glycosyltransferase [Rathayibacter sp.
            AY1E3].
ACCESSION   WP_258075372
VERSION     WP_258075372.1
KEYWORDS    RefSeq.
SOURCE      Rathayibacter sp. AY1E3
  ORGANISM  Rathayibacter sp. AY1E3
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Rathayibacter.
REFERENCE   1  (residues 1 to 114)
  AUTHORS   Formstone,A., Carballido-Lopez,R., Noirot,P., Errington,J. and
            Scheffers,D.J.
  TITLE     Localization and interactions of teichoic acid synthetic enzymes in
            Bacillus subtilis
  JOURNAL   J Bacteriol 190 (5), 1812-1821 (2008)
   PUBMED   18156271
REFERENCE   2  (residues 1 to 114)
  AUTHORS   Zhang,Y.H., Ginsberg,C., Yuan,Y. and Walker,S.
  TITLE     Acceptor substrate selectivity and kinetic mechanism of Bacillus
            subtilis TagA
  JOURNAL   Biochemistry 45 (36), 10895-10904 (2006)
   PUBMED   16953575
REFERENCE   3  (residues 1 to 114)
  AUTHORS   Erbel,P.J., Barr,K., Gao,N., Gerwig,G.J., Rick,P.D. and
            Gardner,K.H.
  TITLE     Identification and biosynthesis of cyclic enterobacterial common
            antigen in Escherichia coli
  JOURNAL   J Bacteriol 185 (6), 1995-2004 (2003)
   PUBMED   12618464
  REMARK    Erratum:[J Bacteriol. 2004 Feb;186(4):1220]
REFERENCE   4  (residues 1 to 114)
  AUTHORS   Rahman,A., Barr,K. and Rick,P.D.
  TITLE     Identification of the structural gene for the TDP-Fuc4NAc:lipid II
            Fuc4NAc transferase involved in synthesis of enterobacterial common
            antigen in Escherichia coli K-12
  JOURNAL   J Bacteriol 183 (22), 6509-6516 (2001)
   PUBMED   11673418
REFERENCE   5  (residues 1 to 114)
  AUTHORS   Katzen,F., Ferreiro,D.U., Oddo,C.G., Ielmini,M.V., Becker,A.,
            Puhler,A. and Ielpi,L.
  TITLE     Xanthomonas campestris pv. campestris gum mutants: effects on
            xanthan biosynthesis and plant virulence
  JOURNAL   J Bacteriol 180 (7), 1607-1617 (1998)
   PUBMED   9537354
REFERENCE   6  (residues 1 to 114)
  AUTHORS   Haft,R.F., Wessels,M.R., Mebane,M.F., Conaty,N. and Rubens,C.E.
  TITLE     Characterization of cpsF and its product CMP-N-acetylneuraminic
            acid synthetase, a group B streptococcal enzyme that can function
            in K1 capsular polysaccharide biosynthesis in Escherichia coli
  JOURNAL   Mol Microbiol 19 (3), 555-563 (1996)
   PUBMED   8830246
REFERENCE   7  (residues 1 to 114)
  AUTHORS   Barr,K., Ward,S., Meier-Dieter,U., Mayer,H. and Rick,P.D.
  TITLE     Characterization of an Escherichia coli rff mutant defective in
            transfer of N-acetylmannosaminuronic acid (ManNAcA) from
            UDP-ManNAcA to a lipid-linked intermediate involved in
            enterobacterial common antigen synthesis
  JOURNAL   J Bacteriol 170 (1), 228-233 (1988)
   PUBMED   3275612
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015748.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03808.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Rathayibacter sp. AY1E3"
                     /db_xref="taxon:2080551"
     Protein         1..114
                     /product="WecB/TagA/CpsF family glycosyltransferase"
                     /EC_number="2.4.1.-"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=12353
     Region          <34..88
                     /region_name="WecG"
                     /note="UDP-N-acetyl-D-mannosaminuronic acid transferase,
                     WecB/TagA/CpsF family [Cell wall/membrane/envelope
                     biogenesis]; COG1922"
                     /db_xref="CDD:441525"
ORIGIN      
        1 mpisswsgwa cparsagswr tgtsprgrrs rtwggcldyi agtqalaprw mgalgvewlf
       61 rlardprrla arylleplql lrivlsgrsc akrthgpcds prpsgrvssg vgph
//
LOCUS       WP_258077032             515 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Xanthomonas
            arboricola].
ACCESSION   WP_258077032
VERSION     WP_258077032.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 515)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..>515
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <14..53
                     /region_name="TubC_N"
                     /note="TubC N-terminal docking domain; pfam18563"
                     /db_xref="CDD:436580"
     Region          72..496
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation (C) domain of non-ribosomal
                     peptide synthetases(NRPSs) and similar domains including
                     the C-domain of SgcC5, a free-standing NRPS with both
                     ester- and amide- bond forming activity; cd19531"
                     /db_xref="CDD:380454"
ORIGIN      
        1 msfrevlkac vdsgirvkar dgklllddpd krltaalrer lvthkaeilt wlqsesgags
       61 lvpiprrdar qaplsfpqrr lwfidqlegg srqyniptam rlrghldvqa mqaaldriva
      121 rhqilrtvyr fqddapvqqv lapapiplaq tdlsalapev alsrardlam qeaarpfdls
      181 adlmlrcvli rladadhvvl ltlhhiasdg wssgvlvnef valyrnrvag lddplpplpi
      241 qyadfaawqi eeagqgvlqr glaywtrqle dlpvvhslpl drprparqrf darqssrrvd
      301 asqtealrml akaneaslfm llqaalaivl grfgatddvv vgvphagrdr aelapligff
      361 intlvlrsdl sgnptlvevi arvrttalda faaadvpfdl vndtlrhers maynplcqvk
      421 fvvqnheage lalpglqiep fvnnveqvhf dldlsvgegr dgltlawtyk dlfdgatidr
      481 iaeayqqvla allsdpqqri dslalidaqe reqll
//
LOCUS       WP_258077033             660 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Xanthomonas
            arboricola].
ACCESSION   WP_258077033
VERSION     WP_258077033.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 660)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         <1..>660
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <1..>660
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
ORIGIN      
        1 gtivfagrnd gqvklrgfri elgeieaalq rlpgvreavv tigqteqggr rlvgyvvggq
       61 grvsdwrqtl stqlpdymvp salvslealp ltangkldrr alpepdaasl avgdyqaprn
      121 etertlasiw railqvervg ihdnffelgg hsllaarlas rvaaqlqrqv pvsavfehpt
      181 parlaaflet aaavsttvpv pidpaqppql slaqqrlwfl drldraasaa yhmpsalhlq
      241 gplelqalqa aldrivarha vlrmrfaetd gcatpwiapm deglplrkdd lslldpeari
      301 qalaaiaree altpfdlgag cpirarlvhl gehehalflt lhhivsdgws ngiltqelsa
      361 lyrafvkgas dplpplplqy adyaawqrsr iddvaleaql tfwrehlhga pellelptdr
      421 erprqpshag amlpfelgea astrlrdwar thgastymal iaawaillsr lsgqdevvig
      481 spvsnrptpe levligffvn tlplrvrvda dapvrvlleq vrtgvlsala nqdvpfeqiv
      541 dvlkpsrqla ysplfqvala fdntpkgatg elpglslssl eqahastrfd ltlslsddar
      601 girgvleyat dlfdaatiqr wagylqrllq alpdaegqpv aalpmlsere reqlvhgfna
//
LOCUS       WP_258077035             155 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Xanthomonas arboricola].
ACCESSION   WP_258077035
VERSION     WP_258077035.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 155)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         <1..>155
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          <1..>155
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 hadyvknmit gaaqmdgail vcsaadgpmp qtrehillsr qvgvphivvf lnkadmvdda
       61 ellelvemev rellskydfp gddtpiihgs arlaldgdqs digvpailkl vdaldtfipe
      121 ptrdvdrpfl mpvedvfsis grgtvvtgri ergii
//
LOCUS       WP_258077036             104 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein, partial [Xanthomonas
            arboricola].
ACCESSION   WP_258077036
VERSION     WP_258077036.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 104)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         <1..>104
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          1..>104
                     /region_name="uvrD"
                     /note="DNA-dependent helicase II; Provisional; PRK11773"
                     /db_xref="CDD:236976"
ORIGIN      
        1 dvshlldhln paqreavsap pghylvlaga gsgktrvlih riawlnevqg vpnhgifavt
       61 ftnkaagemr hrtdlqlrng srgmwigtfh glahrllrlh wqda
//
LOCUS       WP_258077122            1278 aa            linear   BCT 02-MAR-2025
DEFINITION  YadA-like family protein [Xanthomonas arboricola].
ACCESSION   WP_258077122
VERSION     WP_258077122.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 1278)
  AUTHORS   Sandt,C.H. and Hill,C.W.
  TITLE     Nonimmune binding of human immunoglobulin A (IgA) and IgG Fc by
            distinct sequence segments of the EibF cell surface protein of
            Escherichia coli
  JOURNAL   Infect Immun 69 (12), 7293-7303 (2001)
   PUBMED   11705900
REFERENCE   2  (residues 1 to 1278)
  AUTHORS   Hoiczyk,E., Roggenkamp,A., Reichenbecher,M., Lupas,A. and
            Heesemann,J.
  TITLE     Structure and sequence analysis of Yersinia YadA and Moraxella
            UspAs reveal a novel class of adhesins
  JOURNAL   EMBO J 19 (22), 5989-5999 (2000)
   PUBMED   11080146
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015831.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03895.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1278
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..1278
                     /product="YadA-like family protein"
                     /calculated_mol_wt=122191
     Region          39..>741
                     /region_name="auto_Ata"
                     /note="trimeric autotransporter adhesin Ata; NF033481"
                     /db_xref="CDD:411124"
     Region          491..1278
                     /region_name="Hia"
                     /note="Autotransporter adhesin [Intracellular trafficking,
                     secretion, and vesicular transport, Extracellular
                     structures]; COG5295"
                     /db_xref="CDD:444098"
ORIGIN      
        1 mllalagmag vaqatttqad tlahctvvqg qqrcdtdaat sdsaapatas aqtsatpaad
       61 adapafadgq dalalgnasn algdgtsafg ggslalerda taighnvsaa gesatavgsv
      121 atvydydasg fvigqreqat qasgvgatav gggavagdpf ssavgsgasa tgvqsaavgy
      181 raqtfndgat aigglstasg flstaggyss rasgdtstaf gyrarsqgss siavgdtala
      241 sgvqsvvvgg isnfgsitaa tgtggialga gaqsqsdyai aigydsnifp napgntdava
      301 ighsagsfap rtvslggfsl amgdggisig hdstaytens ialgaragts wfngnntaig
      361 adsetngida vaigygarvg dfvddawnrs assavalgar syanrsntvs vgdvqagltr
      421 qitsvapgte andavnvaql dsvravadrl dstlaigktd tdevaahvdg lnalalgsas
      481 naigdganal gsgslalgrd avavgrnasa gdasavavgg vasvpvfdaa gsivgaqeqa
      541 tlaqargaaa lgsgaiatrs fatavgtgaa asgeqsmaag fsaraqddva tavgafstar
      601 staasafgfg aradasmtta vgfnasslge ssvavgslav aagersvtlg gmslisstlr
      661 pagafrvggv aigagarsdg dyavalgyna nvfsndnntd avaighsaas faprtvslga
      721 lasaegaegi gigydarats srsiaigsga ntsilygdni algtnakada pdaiaigrna
      781 nvgvfvgetg saavalgvqs nalgnnslav gynaftregg rdavalgana gasgadsval
      841 gagsrsyean vvsvgngngr ggpatrrivn vgngaiagas tdainggqlf qslsnaasfl
      901 gggaaigaqg vfvaptyviq gssyrnvgea ltaldskvse ldarggtarp gaaarsvaar
      961 vatapapaad asivattada tddgllstsl aadgmadsav ssvtatasgl gasnavqgmp
     1021 iaatvgsitp aatstavgta avanhvtgta iggsayahgp ndtaigsnar vnadgstavg
     1081 antqiaavat navamgegaq vsaasgtaig qgarasaqga valgqgsvad rantvsvgsv
     1141 ggerqvanva agtratdavn kgqldngvaa ansytdsryn amadsfetyq gdiedrlrrq
     1201 nrrldrqgam ssamlnmaas vggiatqnrv gagigfqnge salsvgyqra ispratltvg
     1261 galsgddrsi glgagfgw
//
LOCUS       WP_258077145              99 aa            linear   BCT 02-MAR-2025
DEFINITION  EF-Tu/IF-2/RF-3 family GTPase, partial [Xanthomonas arboricola].
ACCESSION   WP_258077145
VERSION     WP_258077145.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 99)
  AUTHORS   Nissen,P., Kjeldgaard,M., Thirup,S., Polekhina,G., Reshetnikova,L.,
            Clark,B.F. and Nyborg,J.
  TITLE     Crystal structure of the ternary complex of Phe-tRNAPhe, EF-Tu, and
            a GTP analog
  JOURNAL   Science 270 (5241), 1464-1472 (1995)
   PUBMED   7491491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03144.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         <1..>99
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          <1..>99
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 fipeptrdvd rpflmpvedv fsisgrgtvv tgriergiik vgdeieivgi rdtqkttvtg
       61 vemfrklldq gqagdnagll lrgtkrddve rgqvlckpg
//
LOCUS       WP_258077232             388 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF5694 domain-containing protein [Xanthomonas].
ACCESSION   WP_258077232
VERSION     WP_258077232.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas
  ORGANISM  Xanthomonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039197.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18950.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Xanthomonas"
                     /db_xref="taxon:338"
     Protein         1..388
                     /product="DUF5694 domain-containing protein"
                     /calculated_mol_wt=41831
     Region          220..383
                     /region_name="DUF5694"
                     /note="Family of unknown function (DUF5694); pfam18950"
                     /db_xref="CDD:465929"
ORIGIN      
        1 mqpspsriah saraaarffd agsasarqlq rpahcwlwla livpciaqaq vdlsqldaem
       61 aaprtqvlvl gsvhlsqlpk gsdiraarlq plmdrlaaya ptiittedls getcdlmrrh
      121 pavylpedtt tycpdtgeaa ratgldvpaa lgqvrtalrs lpsaptpaqr rhlaalflas
      181 geppsalvqw lqlapaeqrs gdgldaalva rlrsmeqrpn esyqiaarla arlglqrvhp
      241 addhtgdnvd lgdpaaygka iqaawdkaap qaramrehed qltsqgklle lyrainlpas
      301 qqlaiaadfr aalsegspqr ygyrymsgwe irnlrmvsnv rasfaeqpga kvlavvgamh
      361 kpwfdnwlgq lqgvdivdaa qvlgadgk
//
LOCUS       WP_258077260              65 aa            linear   BCT 02-MAR-2025
DEFINITION  AIR synthase-related protein, partial [Xanthomonas arboricola].
ACCESSION   WP_258077260
VERSION     WP_258077260.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 65)
  AUTHORS   Li,C., Kappock,T.J., Stubbe,J., Weaver,T.M. and Ealick,S.E.
  TITLE     X-ray crystal structure of aminoimidazole ribonucleotide synthetase
            (PurM), from the Escherichia coli purine biosynthetic pathway at
            2.5 A resolution
  JOURNAL   Structure 7 (9), 1155-1166 (1999)
   PUBMED   10508786
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014788.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02769.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         <1..65
                     /product="AIR synthase-related protein"
     Region          <10..64
                     /region_name="PurM"
                     /note="Phosphoribosylaminoimidazole (AIR) synthetase
                     [Nucleotide transport and metabolism]; COG0150"
                     /db_xref="CDD:439920"
ORIGIN      
        1 plgcgdqhea daemwrtfnc gigfvliaap eraaaleqal daqslahwri gqvvpaqgdv
       61 rvrig
//
LOCUS       WP_258077273             808 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Xanthomonas arboricola].
ACCESSION   WP_258077273
VERSION     WP_258077273.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024573.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13175.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..808
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..808
                     /product="AAA family ATPase"
                     /calculated_mol_wt=89595
     Region          47..501
                     /region_name="AAA_15"
                     /note="AAA ATPase domain; pfam13175"
                     /db_xref="CDD:433011"
     Region          <331..630
                     /region_name="YbjD"
                     /note="Predicted ATP-dependent endonuclease of the OLD
                     family, contains P-loop ATPase and TOPRIM domains
                     [Replication, recombination and repair]; COG3593"
                     /db_xref="CDD:442812"
ORIGIN      
        1 mqkvplgisq mvgkvegkvq yfaracvvvr vmrknmrtdq gtqgrimkir hieianfrkl
       61 qavrvdltdd ttllvganns gkssamlalr rflvshkspf rlldftlchl ptidaigkew
      121 eaaiagsqpp vvdswmamvp mldlwlsaen gelhfvkdli psfswrsglv gvrfrlepkd
      181 ivalyndfrs erervhalea eaakdvdkaa ltlwpknltd fltrrlgvhf emrwyrldpa
      241 rlvepdtvtr ealpqhlgps tipmqtnpla glirvheina qrgfgemdes edsasagrsg
      301 rrlseqlray ykrhldpeqs pgpsdidalr amdaardafd vrlaasfrpa fqeveslgyp
      361 gandptihvt tqlsaadgin hesavlfeld siggaavtpp lrlpetsngl gyqnlismif
      421 rlmsfrdawl rkskaalasg dlivepihlv mieepeahlh aqvqqvfvrh ayhvltndsl
      481 lrkfpglstq mvvsshsshi ahelpyaslr yfrrlpagmh gkqvpistvs nlesvfgddt
      541 stkrfvtryl rsqhadvffa dalilvegaa erillphfir nrfpqlhqay vtllevggsh
      601 ahrlrpllna lgipcivitd idalgdkasv pvkrnagqvt gnptlrswlk snnnkreidc
      661 lldlaatdkv ivsddlysir mayqtpayig vpvgalpeev lpgtfedalv fanfahfaaa
      721 rgngmigava reiakatsge alasrlfkvi gdgdkagfal gvlydtdfkd lippryieeg
      781 lswlqerivk kkhemllvsv sveegvhe
//
LOCUS       WP_258077306             249 aa            linear   BCT 02-MAR-2025
DEFINITION  AraC family ligand binding domain-containing protein, partial
            [Xanthomonas arboricola].
ACCESSION   WP_258077306
VERSION     WP_258077306.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 249)
  AUTHORS   Soisson,S.M., MacDougall-Shackleton,B., Schleif,R. and Wolberger,C.
  TITLE     Structural basis for ligand-regulated oligomerization of AraC
  JOURNAL   Science 276 (5311), 421-425 (1997)
   PUBMED   9103202
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02311.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..>249
                     /product="AraC family ligand binding domain-containing
                     protein"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
     Region          17..110
                     /region_name="cupin_HpaA-like_N"
                     /note="AraC/XylS family transcriptional regulators similar
                     to HpaA, N-terminal cupin domain; cd06999"
                     /db_xref="CDD:380403"
ORIGIN      
        1 mptrahanaa atavpafgly geqhadtpel lhwesiaars rlhdwriaph rhedlaqlly
       61 vqrgpatlql dgrsqrvrga rviwlpplcv hgfrfdpqvr ghiitlcmpl vrsalnaapl
      121 lqraltipqv lqaqhargll dalfasiadd hayrrighea alhaaaaqll iwtartaleh
      181 aqdaaavspy adpalrhlrg yqalidqhyr ahwpisryag qlgltpghln alcqrlagia
      241 gdrpmravv
//
LOCUS       WP_258077517             762 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase domain-containing protein [Xanthomonas
            arboricola].
ACCESSION   WP_258077517
VERSION     WP_258077517.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025033.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13649.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..762
                     /product="methyltransferase domain-containing protein"
                     /calculated_mol_wt=85735
     Region          46..150
                     /region_name="UbiG"
                     /note="2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,
                     4-benzoquinol methylase [Coenzyme transport and
                     metabolism]; COG2227"
                     /db_xref="CDD:441829"
     Region          283..>384
                     /region_name="Bud32"
                     /note="tRNA A-37 threonylcarbamoyl transferase component
                     Bud32 [Translation, ribosomal structure and biogenesis];
                     COG3642"
                     /db_xref="CDD:442859"
     Region          <459..>689
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
ORIGIN      
        1 mtetmhigar vaalpekyqp ifghpelseg ssrgcedrfv lirecaqrlq gelgrplrvl
       61 dlgcaqgffs lslaaeghqv hgvdfldlnv dvcqalaqeh pmfaasfehg tvedviarld
      121 pdqydlvlgl svfhhlvhsq giarvaglcr klsevtdagi felalreepl ywgpslphdp
      181 aelltdyaft rllsrqathl ssisrplyfa sskfwyvgea vgrfsswsge ahaygrgthq
      241 ysrryyfgdk vfvkkmtmgi ggraeinwqe fnneveflrn ppasypvprl iaalddasdl
      301 flvremaggr llseliddgs pydpdkvvse lleqlviler vglyhndvrc wnvlisqegk
      361 ailidygais aeatdcswlg dlllsflitv keilqrrivp aspgrepald fmtlppryrn
      421 afiqafggdq arwtfaelqe clarsepval hapewtslys hmqqallsyn trlgalysqn
      481 ehdrvelaar aslierlqvg aqqaqdklat lqleaetadn ryrdlekvss elqewakdle
      541 krtaeaedre kqlnngmadr eaenarlvsq ismleselee rqrvrelsel laadlsrlve
      601 erdgmqvsms emervntqqq stidelqaki vslvqrvnrs etisaadarr vkelqldlsh
      661 rlqaledars rirelelavd mlegqigelh tsrswrvtap lrwvtmkvtk rggpfvvhap
      721 qrlertepvl aedevatpad vaidkqlaal dqlgsrirks kk
//
LOCUS       WP_258077511             158 aa            linear   BCT 02-MAR-2025
DEFINITION  alcohol dehydrogenase catalytic domain-containing protein
            [Xanthomonas arboricola].
ACCESSION   WP_258077511
VERSION     WP_258077511.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 158)
  AUTHORS   Taneja,B. and Mande,S.C.
  TITLE     Conserved structural features and sequence patterns in the GroES
            fold family
  JOURNAL   Protein Eng 12 (10), 815-818 (1999)
   PUBMED   10556240
REFERENCE   2  (residues 1 to 158)
  AUTHORS   Murzin,A.G.
  TITLE     Structural classification of proteins: new superfamilies
  JOURNAL   Curr Opin Struct Biol 6 (3), 386-394 (1996)
   PUBMED   8804825
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08240.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..158
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /calculated_mol_wt=16904
     Region          11..>123
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
ORIGIN      
        1 mqataekikt mkairqtafg gpdvlryeds pmpalqsgev lirvravgln ppdwylregy
       61 kalpaqwcpa vdfplilgtd vsgvieavad dveglsvgee vyamvrfpsg laggsrayaq
      121 yvtsgrgrrq tvrdrscprc gcahvaldgl avhgrtra
//
LOCUS       WP_258077596             827 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Xanthomonas
            euroxanthea].
ACCESSION   WP_258077596
VERSION     WP_258077596.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas euroxanthea
  ORGANISM  Xanthomonas euroxanthea
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 827)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Xanthomonas euroxanthea"
                     /db_xref="taxon:2259622"
     Protein         1..827
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=90271
     Region          40..803
                     /region_name="CirA"
                     /note="Outer membrane receptor protein, Fe transport
                     [Inorganic ion transport and metabolism]; COG1629"
                     /db_xref="CDD:441236"
ORIGIN      
        1 msrrplvval altlatpala qeaapatpat rkgedgifsl drmivtgagq aqnqfdasya
       61 italtaeqid klaplnlasl igsmpgiyae stggevqnvy rirgipdegs faviqedgis
      121 pypdnngyfy kteglvrpdl mvesvetvrg gpspifasna aaivnfvtrq ggdtpegavr
      181 ttvgdtglyr ldgywsgkla dgwylaaggf vrrndgyrdv dfpadeggqf rmnlthtldh
      241 gkitftakhl ddknafympi plydprdttr sldplidrft gtlstaqlkr asivssdang
      301 apqrelrdls dgrhmkfnhl ganldlafdn gwslsnkaiv nrldmtfdal yssnapqdas
      361 ayansrraaa saafpglrsl gyvytddgsr fdpastdglv iqgqyramnv radsfaddlr
      421 lhrrfdwggd thditlgvyg ayyarsynsr yqsyllemrq nprtidllgy daagnvvggv
      481 tkdgvviyga drtqgkayts mlapyiadtw qvtdklrlea gvrheryryr awsmlrstgn
      541 lgmadtladd aarlftgara rtaldvgvtn wtagfnydin ptvgiygras rahrapsega
      601 negnvnipta dqfelgtkln fdsldvfata fytkydpyni gtsavnpqtg aaeskdyrgs
      661 vtnpgielaa vwtpaqwlrl danltyndtk vsdltevvan gavavvdvdg nmpnrqpkly
      721 gnagptlyft tgafdwetsl ryayvgkrya dlenttelaa ydtlaanilv rngpwdvqls
      781 vdnltntfal tegnprtdti sgqgtrepiy grpiyernsr lvvtyhf
//
LOCUS       WP_258077707             106 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Xanthomonas hortorum].
ACCESSION   WP_258077707
VERSION     WP_258077707.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas hortorum
  ORGANISM  Xanthomonas hortorum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 106)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Xanthomonas hortorum"
                     /db_xref="taxon:56454"
     Protein         <1..106
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <2..98
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 aplimwnhqa yegydkaftk llrgldekpn vieraasldv mlalvaagyg iglasgakle
       61 pckhsdivvr planqsavit tymlkaasaa psisvdrftt rlkdrn
//
LOCUS       WP_258077781             862 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Xanthomonas bromi].
ACCESSION   WP_258077781
VERSION     WP_258077781.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas bromi
  ORGANISM  Xanthomonas bromi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 862)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Xanthomonas bromi"
                     /db_xref="taxon:56449"
     Protein         1..862
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=91445
     Region          50..200
                     /region_name="PDC1_MCP_like"
                     /note="first PDC (PhoQ/DcuS/CitA) domain of
                     methyl-accepting chemotaxis proteins and similar domains;
                     cd12913"
                     /db_xref="CDD:350338"
     Region          <218..280
                     /region_name="sCache_3_2"
                     /note="Single cache domain 3; pfam17203"
                     /db_xref="CDD:435783"
     Region          328..380
                     /region_name="HAMP"
                     /note="HAMP (Histidine kinases, Adenylyl cyclases, Methyl
                     binding proteins, Phosphatases) domain; smart00304"
                     /db_xref="CDD:197640"
     Region          376..421
                     /region_name="HAMP"
                     /note="Histidine kinase, Adenylyl cyclase,
                     Methyl-accepting protein, and Phosphatase (HAMP) domain;
                     cl01054"
                     /db_xref="CDD:470050"
     Region          424..466
                     /region_name="HAMP_N3"
                     /note="HAMP N-terminal domain 3; pfam18575"
                     /db_xref="CDD:465808"
     Region          <515..862
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(597..598,601..602,605,608..609,611..612,615,
                     618..619,622,625..626,629..630,633,636..637,639..640,644,
                     646..647,650,653..654,657..658,661,664,667..668,671,675,
                     678,685,689,692,695..696,699,702..703,706..707,709..710,
                     713..714,727..728,731,734..735,738,741..742,744..745,
                     748..749,752,755..756,759,762..763,765..766,769..770,
                     772..773,776,779..780,783,786..787)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            667..700
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 migtgilalv cfgmtaaisy wrsseallgs shsmlrevah heassissdi gsafntgstl
       61 antfrieres ggtsrasaaa vlheqlrlqk nwlgistlwe pdafdghdta ninapfhdat
      121 grfmvywsyq kgelvrealh sydkpgdgdw ylaarkshap vviepyyypv agvdtlmttl
      181 stpimdgdrf lgtvnitmsl dalqkrvatl rpldvgeavl lsptgavmas adatqvgktl
      241 ndattqamla kvragqvssd eaavagvdwl rvfvpmrlgn apevfalgim vpkhhvmaqa
      301 rallwviivv gllsaallsv slylllrrev laplaeavkv saavslgqln srieprrkde
      361 mgqlllsmgs mqaqlravie aqdhmasrhd agemsyrmda erfpgeygrm vagtndlvga
      421 hvqvqrqlva vmssyavgdm qadmpalpge kaalsdamaa tkrnlqainq qiltlaqaaa
      481 ngdfstrgda nafdhdfrgm veglnnlmqt tdtnlaevsr llqsisagdl tvrmsgdfrg
      541 vfaqmrddan atasqlaliv ssiqtssisi kgaaseiaag nqdlsqrteq qaanleetaa
      601 smeeltstvk qnaegarqan qlaisaanva vqggqvvgqv vetmsgieas srkiadiisv
      661 idgiafqtni lalnaaveaa rageqgrgfa vvasevrtla qrssgaakei kdliedsvqr
      721 vaegsvlvhs agntmsevva svqrvtdimg eisaasqeqs agieqvnqtv tqmdettqqn
      781 aalveeataa arsledqavq lteavavfki dpshkavakv gapvhstkpa iskrpmavtp
      841 kavakprlvk psasnegnwq ef
//
LOCUS       WP_258077785             271 aa            linear   BCT 02-MAR-2025
DEFINITION  reprolysin-like metallopeptidase [Xanthomonas bromi].
ACCESSION   WP_258077785
VERSION     WP_258077785.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas bromi
  ORGANISM  Xanthomonas bromi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024972.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13583.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Xanthomonas bromi"
                     /db_xref="taxon:56449"
     Protein         1..271
                     /product="reprolysin-like metallopeptidase"
                     /GO_function="GO:0008237 - metallopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=29407
     Region          186..>254
                     /region_name="ZnMc"
                     /note="Zinc-dependent metalloprotease. This super-family
                     of metalloproteases contains two major branches, the
                     astacin-like proteases and the adamalysin/reprolysin-like
                     proteases. Both branches have wide phylogenetic
                     distribution, and contain sub-families, which...; cl00064"
                     /db_xref="CDD:469599"
ORIGIN      
        1 mkinflaati flglscasts mvsaadqwls fssqqksrit sterltpiri nesqaydnaa
       61 agglwlplpd grriyaktis qntqdndhwt fvgtlpaekq svvitfgrna vfgsipvgdn
      121 tsvrivtqag klyiserlpk dmaldrlksh dsamvsdyli ppkpplseqd lqhslalvrq
      181 atsattpavv dvlvgytpgl vrelgsvdav ntrinylvav tnraysdsqv ngrlrligtq
      241 qvnytdsttd daalkeppnn apkkrdtivs e
//
LOCUS       WP_258077919             195 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Xanthomonas arboricola].
ACCESSION   WP_258077919
VERSION     WP_258077919.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 195)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 195)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..195
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=21403
     Region          4..149
                     /region_name="yhbS"
                     /note="Predicted N-acetyltransferase YhbS [General
                     function prediction only]; COG3153"
                     /db_xref="CDD:442387"
ORIGIN      
        1 mdtirpyqsr dfdacmalfd anvpvffsag eradfagfls hhaaawhyql lergnavaga
       61 agyaigadgt taslcwgmvh prlhrcgvgt qlllarleal rqmpdvrrvi ldtsqhtrqf
      121 yarfgfvvqq vtvdgyapgl erwdmafelc ssdvvhgvwm pravvqtssl avpplcqach
      181 qvtateqdsq stsyh
//
LOCUS       WP_258077946              48 aa            linear   BCT 02-MAR-2025
DEFINITION  cation transporter, partial [Enterococcus faecalis].
ACCESSION   WP_258077946
VERSION     WP_258077946.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 48)
  AUTHORS   Rosenzweig,A.C., Huffman,D.L., Hou,M.Y., Wernimont,A.K.,
            Pufahl,R.A. and O'Halloran,T.V.
  TITLE     Crystal structure of the Atx1 metallochaperone protein at 1.02 A
            resolution
  JOURNAL   Structure 7 (6), 605-617 (1999)
   PUBMED   10404590
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012621.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00403.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..48
                     /organism="Enterococcus faecalis"
                     /db_xref="taxon:1351"
     Protein         1..>48
                     /product="cation transporter"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
     Region          1..>47
                     /region_name="ZntA"
                     /note="Cation-transporting P-type ATPase [Inorganic ion
                     transport and metabolism]; COG2217"
                     /db_xref="CDD:441819"
ORIGIN      
        1 mtcavcatti ekkiheldgv yfakvnltte vlkleydegv lsnhtvit
//
LOCUS       WP_258078066              81 aa            linear   BCT 02-MAR-2025
DEFINITION  EF-Tu/IF-2/RF-3 family GTPase, partial [Xanthomonas arboricola].
ACCESSION   WP_258078066
VERSION     WP_258078066.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 81)
  AUTHORS   Nissen,P., Kjeldgaard,M., Thirup,S., Polekhina,G., Reshetnikova,L.,
            Clark,B.F. and Nyborg,J.
  TITLE     Crystal structure of the ternary complex of Phe-tRNAPhe, EF-Tu, and
            a GTP analog
  JOURNAL   Science 270 (5241), 1464-1472 (1995)
   PUBMED   7491491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03144.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         <1..>81
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          <1..>81
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 rpflmpvedv fsisgrgtvv tgriergiik vgdeieivgi rdtqkttvtg vemfrklldq
       61 gqagdnagll lrgtkrddve r
//
LOCUS       WP_258078069              68 aa            linear   BCT 02-MAR-2025
DEFINITION  GTP-binding protein, partial [Xanthomonas arboricola].
ACCESSION   WP_258078069
VERSION     WP_258078069.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 68)
  AUTHORS   Stark,H., Rodnina,M.V., Rinke-Appel,J., Brimacombe,R.,
            Wintermeyer,W. and van Heel,M.
  TITLE     Visualization of elongation factor Tu on the Escherichia coli
            ribosome
  JOURNAL   Nature 389 (6649), 403-406 (1997)
   PUBMED   9311785
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00009.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         <1..>68
                     /product="GTP-binding protein"
                     /GO_function="GO:0003924 - GTPase activity [Evidence IEA]"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
     Region          <1..>68
                     /region_name="PRK00049"
                     /note="elongation factor Tu; Reviewed"
                     /db_xref="CDD:234596"
ORIGIN      
        1 cpghadyvkn mitgaaqmdg ailvcsaadg pmpqtrehil lsrqvgvphi vvflnkadmv
       61 ddaellel
//
LOCUS       WP_258078085             516 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase TerL endonuclease subunit, partial [Enterococcus
            faecalis].
ACCESSION   WP_258078085
VERSION     WP_258078085.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 516)
  AUTHORS   Xu,R.G., Jenkins,H.T., Chechik,M., Blagova,E.V., Lopatina,A.,
            Klimuk,E., Minakhin,L., Severinov,K., Greive,S.J. and Antson,A.A.
  TITLE     Viral genome packaging terminase cleaves DNA using the canonical
            RuvC-like two-metal catalysis mechanism
  JOURNAL   Nucleic Acids Res 45 (6), 3580-3590 (2017)
   PUBMED   28100693
REFERENCE   2  (residues 1 to 516)
  AUTHORS   Hilbert,B.J., Hayes,J.A., Stone,N.P., Duffy,C.M., Sankaran,B. and
            Kelch,B.A.
  TITLE     Structure and mechanism of the ATPase that powers viral genome
            packaging
  JOURNAL   Proc Natl Acad Sci U S A 112 (29), E3792-E3799 (2015)
   PUBMED   26150523
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042863.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20441.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Enterococcus faecalis"
                     /db_xref="taxon:1351"
     Protein         <1..516
                     /product="terminase TerL endonuclease subunit"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
     Region          18..516
                     /region_name="YmfN"
                     /note="Phage terminase-like protein, large subunit,
                     contains N-terminal HTH domain [Mobilome: prophages,
                     transposons]; COG4626"
                     /db_xref="CDD:443665"
ORIGIN      
        1 lyglylddci nygekwffel qpfqkfliaf vflyfkknnr nfyrkflwmf grgggkngll
       61 svvlnflqte lhgildynis ivansedqak tsfeeiynti krnktlqkaf eygktvitsk
      121 ktgsyirfrt sngdtkdglr dgavafdeih qypsnkdvkv hisglgkkpn prefyvgtdg
      181 yvregfldsl kekakrvlng ssrpnaifpf ickldsedqv tesenwelan pmfhqplsey
      241 aeslletife eyedleddps nreefmtkrm nlpvtdlers vasyeeimdt nrplpslegr
      301 qaigcldfas lrdfaacgll fkdrddyvfk thsfvrkqfa diyygysrka seqtkerfap
      361 ikewenrgll svvdgatiep qtvvdwfveq rykygvtkiv adnfrmdvlr plliaagfev
      421 vviknpravd sllaprieta fanrhiifge nplmrwytnn vlvktnndgn ktylkkeevr
      481 rktdgfkafv cgmyladelt dynfedafdi leeldf
//
LOCUS       WP_258078157             508 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein, partial [Enterococcus
            faecium].
ACCESSION   WP_258078157
VERSION     WP_258078157.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 508)
  AUTHORS   McIver,K.S. and Myles,R.L.
  TITLE     Two DNA-binding domains of Mga are required for virulence gene
            activation in the group A streptococcus
  JOURNAL   Mol Microbiol 43 (6), 1591-1601 (2002)
   PUBMED   11952907
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019885.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08280.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..508
                     /product="helix-turn-helix domain-containing protein"
     Region          49..>341
                     /region_name="BglG"
                     /note="Transcriptional antiterminator [Transcription];
                     COG3711"
                     /db_xref="CDD:442925"
ORIGIN      
        1 iildatkeni ifkyrgkrwv rmiedyiekd iirqvkltey lydlkilyvk evakrlnvtf
       61 ntikrdfski tailadyiey seitsttihl sffsnfsryd likelykesk flrvcsrylm
      121 gdknyttivd eefvsvakaf kikkevekyf ksakimdedg nlldkelemr fvilsvwmrc
      181 dlldesidkk sfklanifvd qvldrlsnmy emnnreyqfi llsayliitr kdnftlyysk
      241 neldylkgtn lfnrireise ivldkydlpe neiayfvsiy ksinlntvny lvvnmnymqq
      301 reifieqrpk tvkvliryle nafnanlnhn ilfekpfmnf lnkswcnlqn ytveqhyyls
      361 dsqleifykl kkilylwked vqeeleydle fndtsieklc teiessltnk irnkfaiiiv
      421 aedelshily renitrwlnm dynvidnimy ysldevpvya eewphiiice rslvskkeyd
      481 klnlfliskn tifidiknil lyiydyqe
//
LOCUS       WP_258078124             206 aa            linear   BCT 02-MAR-2025
DEFINITION  cysteine peptidase family C39 domain-containing protein, partial
            [Enterococcus faecalis].
ACCESSION   WP_258078124
VERSION     WP_258078124.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 206)
  AUTHORS   Havarstein,L.S., Diep,D.B. and Nes,I.F.
  TITLE     A family of bacteriocin ABC transporters carry out proteolytic
            processing of their substrates concomitant with export
  JOURNAL   Mol Microbiol 16 (2), 229-240 (1995)
   PUBMED   7565085
REFERENCE   2  (residues 1 to 206)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015377.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03412.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Enterococcus faecalis"
                     /db_xref="taxon:1351"
     Protein         1..>206
                     /product="cysteine peptidase family C39 domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          4..146
                     /region_name="Peptidase_C39B"
                     /note="A sub-family of peptidase family C39. Peptidase
                     family C39 mostly contains bacteriocin-processing
                     endopeptidases from bacteria. The cysteine peptidases in
                     family C39 cleave the 'double-glycine' leader peptides
                     from the precursors of various bacteriocins...; cd02418"
                     /db_xref="CDD:239099"
     Site            order(9,15,100,116)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:239099"
ORIGIN      
        1 mikrphvmqd siqdcgvaci emickfynin idrryiqeet gygmigislk amekffskvd
       61 anpeivnisk inrlnkenre minnslpaiv fleeeeiinh fvviwhigkk rilvsdptht
      121 kkewinnkqi ekraisylfv ekpkniflnr spkkvrfygk fikrnlkifs lvmffsiivs
      181 llstylsfnl gkninilekn isqvhn
//
LOCUS       WP_258078127             144 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Enterococcus
            faecalis].
ACCESSION   WP_258078127
VERSION     WP_258078127.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Enterococcus faecalis"
                     /db_xref="taxon:1351"
     Protein         <1..144
                     /product="ABC transporter substrate-binding protein"
     Region          <1..141
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 tenskkagef lqnqlqeslk gltvtvtpvp anaqieklsk gdfsisligw qagyadplsf
       61 lanfktnspm nyggyesnef dillkdtsdn rlkslkeaee lliddaaivp iiqtgsskli
      121 npnlkdinlh svgsrydyre mkke
//
LOCUS       WP_258078172            1020 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Xanthomonas
            axonopodis].
ACCESSION   WP_258078172
VERSION     WP_258078172.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas axonopodis
  ORGANISM  Xanthomonas axonopodis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Xanthomonas axonopodis"
                     /db_xref="taxon:53413"
     Protein         1..>1020
                     /product="DUF6531 domain-containing protein"
     Region          269..>317
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
     Region          <397..989
                     /region_name="RhsA"
                     /note="Uncharacterized conserved protein RhaS, contains 28
                     RHS repeats [General function prediction only]; COG3209"
                     /db_xref="CDD:442442"
     Region          <731..>1000
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
ORIGIN      
        1 mlnnpkdwim ktrfhifltl lltilidasi pqaqaqmage ycyrscfrsl qeaenemrsa
       61 lpygayvtkd ktiitegnse apayqiqyrv erqppshmsa pgylvggqgs ndigcaannd
      121 pflknyctne neiiqnmmty mrtsypdctt sservegayg epyvqsipyy egkgylsfda
      181 pggkwlkynl scpgwsdpsp spqqsmlvkr qiyscpagly pvnafnpayn stgnpdftad
      241 ypflcqngdt piiyakgidq tkscpanqnp clpatgdkfr kendlvfagk pfqrfyhslq
      301 qlqadqgmap gwshsfsdav ggggsflttf dgffeqfkst gngsyrgqrn sselmlrsed
      361 gttmlvtaeg dkriynsggr laaiqssvsp afdveliyag nrltqaidgs ghtltfgyrn
      421 galdkvsldd gsyiqygyds dqnlisaths dgatrtykyg etnlapagha hlltgieedg
      481 iryatfsyap dgrvassslh angtqvetts iaysgtsgaq vkqpngtrys yqfgqglfrq
      541 vesisgpdga vamsfekgrp vsitdrrgkt trftyqdels gqatsyslmt easgtdylrs
      601 qkttrdaenr vieqetrnaa gvtslvrniy sgglttfrcr ydaaaanasa yvcgsqenap
      661 atvrqtsysy ctkndsdqas sycpiagllk ridgsgkgta davqyayfis dapdcgspgk
      721 tcphrkgdlw kvtnalgqvt eylaydgagr plstkdangi vtdytyhprg wltatkvrga
      781 dasseaddri tridywptgl vkqvtqpdga ftaftydaah rltditdnag ntvhytldna
      841 gnrvkedtkd aagtlkrtls rvynqlgqlk tqatagsdpt dfaydangna tsvtdalatv
      901 tqseydplnr lsrtlqdvag ikadttfayd aldnltkvtd pkgldttydy ngfgdlvklt
      961 spdtgvtryt ydsagnratq tdargnttay sydslnrltk vtypttslnv tytydvtqta
//
LOCUS       WP_258078233             532 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Enterococcus faecium].
ACCESSION   WP_258078233
VERSION     WP_258078233.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 532)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 532)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 532)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 532)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..532
                     /product="ATP-binding protein"
                     /calculated_mol_wt=59318
     Region          2..526
                     /region_name="PRK11086"
                     /note="sensory histidine kinase DcuS; Provisional"
                     /db_xref="CDD:236839"
ORIGIN      
        1 milvvcfstf vslivsaili rnfilsmnrs svsdrissia kivasdkliq kklqtgdpth
       61 viqgitneim vasnldfivv mdpegirysh adpsyiglpf sshedvkkvi ggqeffseke
      121 gmlgfgfryf vpiyydqeii gavcvgltnn tidnqvkdgq kmivfsliig livgiigavf
      181 laqkmkkvll glepqeiaeq lsektiiene vdegilaiss dktillintp aknifyqtkr
      241 lsdfevgkki sdnlydvlfk etidhqttvr tqsmylngie tissvtplfs ndrflgavat
      301 lrnrsevmkl meelggtkqy insmraqthe fmnklhvisg lidlkkyeev thfiqqlnqn
      361 ykkeigqvsn likvpaiagf llgkineake qsvemllesd sfipkmemdd sihsllqvlg
      421 nlldnakeav lqmperngqv rlhlnydtea evfivtvcdd gvgiseeise kiftlgfstk
      481 ginrgyglni ihsivkrhgg ilefskqang gtivylelpk kedqnddkcl nn
//
LOCUS       WP_258078278             153 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Xanthomonas arboricola].
ACCESSION   WP_258078278
VERSION     WP_258078278.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 153)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 153)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 153)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..153
                     /product="ATP-binding protein"
                     /calculated_mol_wt=16662
     Region          <16..84
                     /region_name="COG4191"
                     /note="Signal transduction histidine kinase regulating
                     C4-dicarboxylate transport system [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443345"
ORIGIN      
        1 mqqaltaaer rasqqnardi cgerskvrit lethtlanvg vagrrggddl tlsvkdtgsg
       61 mapeirdqlf dayfttkpag kgrgwgwrrw mersgrptdt sscnrcldra paarwasrqr
      121 srlapeisra ggahtlsrip ngvtvhlpih cla
//
LOCUS       WP_258078316              90 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Xanthomonas arboricola].
ACCESSION   WP_258078316
VERSION     WP_258078316.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 90)
  AUTHORS   Mullin,D.A., Zies,D.L., Mullin,A.H., Caballera,N. and Ely,B.
  TITLE     Genetic organization and transposition properties of IS511
  JOURNAL   Mol Gen Genet 254 (4), 456-463 (1997)
   PUBMED   9180700
REFERENCE   2  (residues 1 to 90)
  AUTHORS   Fischer,J., Maier,H., Viell,P. and Altenbuchner,J.
  TITLE     The use of an improved transposon mutagenesis system for DNA
            sequencing leads to the characterization of a new insertion
            sequence of Streptomyces lividans 66
  JOURNAL   Gene 180 (1-2), 81-89 (1996)
   PUBMED   8973350
REFERENCE   3  (residues 1 to 90)
  AUTHORS   Zekri,S. and Toro,N.
  TITLE     Identification and nucleotide sequence of Rhizobium meliloti
            insertion sequence ISRm6, a small transposable element that belongs
            to the IS3 family
  JOURNAL   Gene 175 (1-2), 43-48 (1996)
   PUBMED   8917074
  REMARK    Erratum:[Gene 1997 Mar 25;188(1):149]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01527.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..90
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=9762
     Region          9..>70
                     /region_name="InsE"
                     /note="Transposase InsE and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2963"
                     /db_xref="CDD:442203"
ORIGIN      
        1 mqvptqrvtr rrytddfkar aialaepigr akaarqldms vktlgnwada sragvatpee
       61 ayasvqrlra amdevlapvv prartalsrv
//
LOCUS       WP_258078403             696 aa            linear   BCT 02-MAR-2025
DEFINITION  ricin-type beta-trefoil lectin domain protein [Xanthomonas
            arboricola].
ACCESSION   WP_258078403
VERSION     WP_258078403.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012859.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00652.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..696
                     /product="ricin-type beta-trefoil lectin domain protein"
                     /calculated_mol_wt=73193
     Region          206..415
                     /region_name="ZnMc"
                     /note="Zinc-dependent metalloprotease. This super-family
                     of metalloproteases contains two major branches, the
                     astacin-like proteases and the adamalysin/reprolysin-like
                     proteases. Both branches have wide phylogenetic
                     distribution, and contain sub-families, which...; cl00064"
                     /db_xref="CDD:469599"
     Site            order(348..349,352,358)
                     /site_type="active"
                     /db_xref="CDD:238124"
     Region          <451..515
                     /region_name="RicinB_lectin_2"
                     /note="Ricin-type beta-trefoil lectin domain-like;
                     pfam14200"
                     /db_xref="CDD:464102"
     Region          486..609
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cd00161"
                     /db_xref="CDD:467293"
     Site            order(500..502,513,515,522..523)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(541..542,554,556,563..564)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Region          577..691
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cd00161"
                     /db_xref="CDD:467293"
     Site            order(584..586,597,599,606..607)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(584..586,597,599,606..607)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(626..627,638,640,647..648)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(666..668,679,681,688..689)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
ORIGIN      
        1 mkgdgtakpq asgphgiasg apripagqra lpfdaadaga lvsytsrtpt gfdgayalyp
       61 itvseahair asvegtmmvp tpdgtalrih yvsrrdsrrg iwtwvgrvag qevgseaiit
      121 fgknavfgsl gtiggvayqi ttidgapylm aapaaslrsa gsrndalhla daathlaage
      181 tapgyiadya slaqvnaqag ttatntidvl lgytagyrdy rggadaidtv ltnlvetanq
      241 sfananinlr yrlvgsvltg ypdsglndqa lndltgvgqd taaslvplhd ardrlgadvv
      301 glirrfnndq qscgvawltg gtdsrwgyav isdgvdggyy ctrgtlahef ghllgsghqr
      361 etgqetgfny ghrsdvgsfh ttmaypvngq seilvysspa istcngqpcg vadqadnara
      421 flatapnvvq yrqtvvpldd ssspgqvmgp sgkcldvrdg aitntapvqv wdcngfrqqk
      481 wtfqrgsrsl rsegtdkvld itgvsrangv piqlyqslnt anqawyftna sviatggkvl
      541 dvaargsgns arlqlwdnlg gdnqrwsfnp vngeirvstg rcldvmefgv asgtpvqlwd
      601 csgtknqiwq lgkngaiigy ggncleavnt aqngtairma actgtsaqaw rirgqirsel
      661 nakclddsvg garngalaqm weclgnvnqt wevqpn
//
LOCUS       WP_258078408             628 aa            linear   BCT 02-MAR-2025
DEFINITION  XVIPCD domain-containing protein [Xanthomonas arboricola].
ACCESSION   WP_258078408
VERSION     WP_258078408.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 628)
  AUTHORS   Oka,G.U., Souza,D.P., Cenens,W., Matsuyama,B.Y., Cardoso,M.V.C.,
            Oliveira,L.C., da Silva Lima,F., Cuccovia,I.M., Guzzo,C.R.,
            Salinas,R.K. and Farah,C.S.
  TITLE     Structural basis for effector recognition by an antibacterial type
            IV secretion system
  JOURNAL   Proc Natl Acad Sci U S A 119 (1) (2022)
   PUBMED   34983846
REFERENCE   2  (residues 1 to 628)
  AUTHORS   Souza,D.P., Oka,G.U., Alvarez-Martinez,C.E., Bisson-Filho,A.W.,
            Dunger,G., Hobeika,L., Cavalcante,N.S., Alegria,M.C., Barbosa,L.R.,
            Salinas,R.K., Guzzo,C.R. and Farah,C.S.
  TITLE     Bacterial killing via a type IV secretion system
  JOURNAL   Nat Commun 6, 6453 (2015)
   PUBMED   25743609
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 628)
  AUTHORS   Alegria,M.C., Souza,D.P., Andrade,M.O., Docena,C., Khater,L.,
            Ramos,C.H., da Silva,A.C. and Farah,C.S.
  TITLE     Identification of new protein-protein interactions involving the
            products of the chromosome- and plasmid-encoded type IV secretion
            loci of the phytopathogen Xanthomonas axonopodis pv. citri
  JOURNAL   J Bacteriol 187 (7), 2315-2325 (2005)
   PUBMED   15774874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042736.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20410.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..628
                     /product="XVIPCD domain-containing protein"
                     /calculated_mol_wt=67727
     Region          484..595
                     /region_name="DUF6696"
                     /note="Domain of unknown function (DUF6696); pfam20410"
                     /db_xref="CDD:466559"
ORIGIN      
        1 maapspqlea alarfaasga nqdqaaqlrg aliadpelqq qfdqqaqagh lrafalqavs
       61 ssapnlagty niqsgvitlp stsiqptgas psndlratlq vqqmsvafah styqdsarhs
      121 hpvtqnmvdn lqstingspf laeeikkaat tvdpsdrqrp lrahlegfgf lgpgmaaggt
      181 ydgnskrmnl pplglqtgsa anphgmfndr dmtfvlghei qhsfnhaskh qatakfladv
      241 eaqskvrgpv hdytdelrny iqagredeak aeiagwnall skqqqtnpsa glkemhatqi
      301 drvndfvkkd pftglvtgkp gltfnldgsl sqtpgniaam ghhyfdrpsp lysqpgqrpv
      361 gigehrnpag alqptadypn yygtwgveqi lqaedranvl hqgawpqvti dmaalglkeh
      421 lienegldrg qnkapfayhd sstrpptlhh fdhtqdgsvn rahdhtyvpv vpntpaaggp
      481 rgpddpahpd hamleqirsg vrkidqsvgk pyddmserls rsllaackdn reaypgvgdr
      541 slagnalsrv dhvvmgktgn lfavegrmdd pahrrahvei dqaihtpveq sdqkllvanq
      601 aiaqeralvq qqelargvse pdpggptr
//
LOCUS       WP_258078458             384 aa            linear   BCT 02-MAR-2025
DEFINITION  XVIPCD domain-containing protein [Xanthomonas arboricola].
ACCESSION   WP_258078458
VERSION     WP_258078458.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 384)
  AUTHORS   Oka,G.U., Souza,D.P., Cenens,W., Matsuyama,B.Y., Cardoso,M.V.C.,
            Oliveira,L.C., da Silva Lima,F., Cuccovia,I.M., Guzzo,C.R.,
            Salinas,R.K. and Farah,C.S.
  TITLE     Structural basis for effector recognition by an antibacterial type
            IV secretion system
  JOURNAL   Proc Natl Acad Sci U S A 119 (1) (2022)
   PUBMED   34983846
REFERENCE   2  (residues 1 to 384)
  AUTHORS   Souza,D.P., Oka,G.U., Alvarez-Martinez,C.E., Bisson-Filho,A.W.,
            Dunger,G., Hobeika,L., Cavalcante,N.S., Alegria,M.C., Barbosa,L.R.,
            Salinas,R.K., Guzzo,C.R. and Farah,C.S.
  TITLE     Bacterial killing via a type IV secretion system
  JOURNAL   Nat Commun 6, 6453 (2015)
   PUBMED   25743609
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 384)
  AUTHORS   Alegria,M.C., Souza,D.P., Andrade,M.O., Docena,C., Khater,L.,
            Ramos,C.H., da Silva,A.C. and Farah,C.S.
  TITLE     Identification of new protein-protein interactions involving the
            products of the chromosome- and plasmid-encoded type IV secretion
            loci of the phytopathogen Xanthomonas axonopodis pv. citri
  JOURNAL   J Bacteriol 187 (7), 2315-2325 (2005)
   PUBMED   15774874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042736.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20410.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..384
                     /product="XVIPCD domain-containing protein"
                     /calculated_mol_wt=41691
     Region          249..352
                     /region_name="DUF6696"
                     /note="Domain of unknown function (DUF6696); pfam20410"
                     /db_xref="CDD:466559"
ORIGIN      
        1 mqaneesrfp qpqqaaassa gvrpaspltd paltplvsqs ptlqaglsql krdgigvvwg
       61 nagggtyiip dkqividqna igkderlars lsheighhrf aeepdysskh ayvtnmlrge
      121 aaatlsnalv rrevlnhqgp digiagsgtr pkqyeaiadq qmsgqitrda alnqiaqvfk
      181 teqpsvgpsk tyeqyygdyy dkhiaplqrk hgrpepgsgt dslvndvkqd lpsrdsqapl
      241 sarpslptqq dhadhalyqq ikggveklda qhgrewdass qrmtasllvl akeegltrvd
      301 hvllnsptdk laagekvflv qgiqsdpahl radmatmqav qtpenqsfer vqsinqaqsq
      361 areqqqaleq sqqtvtppgp tmtr
//
LOCUS       WP_258078460             829 aa            linear   BCT 02-MAR-2025
DEFINITION  family 20 glycosylhydrolase [Xanthomonas arboricola].
ACCESSION   WP_258078460
VERSION     WP_258078460.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 829)
  AUTHORS   Tews,I., Perrakis,A., Oppenheim,A., Dauter,Z., Wilson,K.S. and
            Vorgias,C.E.
  TITLE     Bacterial chitobiase structure provides insight into catalytic
            mechanism and the basis of Tay-Sachs disease
  JOURNAL   Nat Struct Biol 3 (7), 638-648 (1996)
   PUBMED   8673609
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012931.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00728.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..829
                     /product="family 20 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=89067
     Region          71..646
                     /region_name="Chb"
                     /note="N-acetyl-beta-hexosaminidase [Carbohydrate
                     transport and metabolism]; COG3525"
                     /db_xref="CDD:442747"
     Region          <753..803
                     /region_name="CBM6-CBM35-CBM36_like"
                     /note="Carbohydrate Binding Module 6 (CBM6) and CBM35_like
                     superfamily; cl14880"
                     /db_xref="CDD:449372"
ORIGIN      
        1 mmsnsvpsvr splsrqpspr slsarlpssh gpcsrllama ltamvlvgcg qrdtanapva
       61 anprtistlp attaplplip apaearrgtg sfrvgtgtvi siptgnaevr rsaeslasll
      121 qrtrgltlev rtetsasphs irlertphap vahregysld vdgngiriaa rdgaglfyga
      181 isawqlmtpd arkgdvavpa vairdwprfg wrgqhldaar hfhdvatvkh vldamaahkl
      241 nvlhwhltdd qgwrieikry pkltevgawr tppgagqhgt peryggfytq qqiseivaya
      301 arlhitvlpe ldmpghaqaa vaaypeevgv pgqrtqvgvd wgvnpylfnt serslsfitn
      361 vldevltlfp sayihiggde avkdqweasp avraqmrklg vkdahamqgw fneqlaaylt
      421 qhgrrmigwd eileggvpas asvmswrgte gavtaarqgh dvvlapgdwl yldnlqttrs
      481 depngrltvl plskvyafdp vpgelsaeqs thvlgaqgal wseyipsrwh vdhalfprls
      541 aiaevtwspv aarnwkdfla rlpaqlqryk algidysdga faadialesg pnpvlagspa
      601 kvalgtqaga gtlhytvdgs dptpasprya apftiqlptt vkatafdagg talaatrsrt
      661 fdragllrvd tqglrdcvda galglrlpll peltaadtpv ynvdlfhacr lypqarldgv
      721 gairieaarl pnnfglaheq skvvqypakt rrgelevrlg cegeliasvq lpnsatlgeq
      781 ftletalpar tgihdlclrf tapirgplya igaaqliett aqappaatr
//
LOCUS       WP_258078496             475 aa            linear   BCT 02-MAR-2025
DEFINITION  SpaA isopeptide-forming pilin-related protein, partial
            [Enterococcus faecium].
ACCESSION   WP_258078496
VERSION     WP_258078496.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 475)
  AUTHORS   Kang,H.J., Paterson,N.G., Gaspar,A.H., Ton-That,H. and Baker,E.N.
  TITLE     The Corynebacterium diphtheriae shaft pilin SpaA is built of tandem
            Ig-like modules with stabilizing isopeptide and disulfide bonds
  JOURNAL   Proc Natl Acad Sci U S A 106 (40), 16967-16971 (2009)
   PUBMED   19805181
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2009 Oct 27;106(43):18427]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037639.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17802.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..475
                     /product="SpaA isopeptide-forming pilin-related protein"
     Region          1..100
                     /region_name="CollagenBindB"
                     /note="Repeat unit of collagen-binding protein domain B;
                     cl15753"
                     /db_xref="CDD:417766"
     Site            order(32..33,63,66,68,81,84,86,89,94,96..97)
                     /site_type="other"
                     /note="domain interaction interfaces [polypeptide
                     binding]"
                     /db_xref="CDD:212461"
     Region          <94..434
                     /region_name="ClfA"
                     /note="Clumping factor A-related surface protein, MSCRAMM
                     (microbial surface components recognizing adhesive matrix
                     molecules) family, DEv-IgG fold [Cell
                     wall/membrane/envelope biogenesis]; COG4932"
                     /db_xref="CDD:443959"
ORIGIN      
        1 weefdnnpad rpdqvtfeiq rehttnaaaw kngyiritkp tkdtantwer adveklsans
       61 gesyqeilsl pqynnqgqaf syqtikelpv pgydsqqida ltwkntkqft pldlkitkns
      121 stgekdliga vfkltgdsid tlltdngdgt yslpenvklq kemtytltet kapeghelsk
      181 kttwkikias nstvtvdgki vttsddtiql tienpfieip iavrkytmqg tgkemnlkga
      241 afalqkketn gayqpmdnqt tnekglaifd sltpgeyrvv etagpagydt spgnyefqid
      301 kygkiiytgk niettngmwt lthqnrlkaf dltvhkkedn gqalkgakfr lqgpeidlel
      361 pkdgqetdtf lfenlkpgty kltetftpgg yqglkdpvti iikedgsiqv egqdyesvls
      421 pgaknnqisl ditnqakvpl petggigrlg iylvgmigct fsiwylffkk erggs
//
LOCUS       WP_258078613             217 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease subunit S, partial [Enterococcus
            faecalis].
ACCESSION   WP_258078613
VERSION     WP_258078613.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 217)
  AUTHORS   Janscak,P. and Bickle,T.A.
  TITLE     The DNA recognition subunit of the type IB restriction-modification
            enzyme EcoAI tolerates circular permutions of its polypeptide chain
  JOURNAL   J Mol Biol 284 (4), 937-948 (1998)
   PUBMED   9837717
REFERENCE   2  (residues 1 to 217)
  AUTHORS   Bickle,T.A. and Kruger,D.H.
  TITLE     Biology of DNA restriction
  JOURNAL   Microbiol Rev 57 (2), 434-450 (1993)
   PUBMED   8336674
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01420.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Enterococcus faecalis"
                     /db_xref="taxon:1351"
     Protein         <1..217
                     /product="restriction endonuclease subunit S"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
     Region          35..216
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
     Site            order(135,138..139,141..142,173,175,179,183,186..187,212,
                     214..215)
                     /site_type="other"
                     /note="TRD-CR/TRD-CR interface [polypeptide binding]"
                     /db_xref="CDD:341135"
ORIGIN      
        1 leqlkelkka ylqlmfpkkd etvprvrfad feddwqlckl gdvveifdgt hqtprytdsg
       61 vkfvsvenia tletkkyith eayekeyskk rakkgdilmt rigdigtmkv ietdeplayy
      121 vtlallkake tnpyflsfii sspeiqrniw krtlhiafpk kinlgeinqv emkitifeeq
      181 dkigdlftnl ddaiilnqnk lnqlkslkks ylqnmfi
//
LOCUS       WP_258078570              82 aa            linear   BCT 02-MAR-2025
DEFINITION  S41 family peptidase, partial [Enterococcus faecalis].
ACCESSION   WP_258078570
VERSION     WP_258078570.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015531.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03572.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Enterococcus faecalis"
                     /db_xref="taxon:1351"
     Protein         <1..82
                     /product="S41 family peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
     Region          <9..75
                     /region_name="Peptidase_S41"
                     /note="C-terminal processing peptidase family S41;
                     cl02526"
                     /db_xref="CDD:470603"
     Site            21
                     /site_type="active"
                     /note="Active site serine [active]"
                     /db_xref="CDD:143475"
ORIGIN      
        1 slhkkklgkk vavvinnnta saaeslllal knnpnvkvfg mpsagytsvn lgrfftnqns
       61 dnywwfvytv gyyetikpik gk
//
LOCUS       WP_258078621             652 aa            linear   BCT 02-MAR-2025
DEFINITION  RNase A-like domain-containing protein [Enterococcus faecium].
ACCESSION   WP_258078621
VERSION     WP_258078621.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 652)
  AUTHORS   Batot,G., Michalska,K., Ekberg,G., Irimpan,E.M., Joachimiak,G.,
            Jedrzejczak,R., Babnigg,G., Hayes,C.S., Joachimiak,A. and
            Goulding,C.W.
  TITLE     The CDI toxin of Yersinia kristensenii is a novel bacterial member
            of the RNase A superfamily
  JOURNAL   Nucleic Acids Res 45 (9), 5013-5025 (2017)
   PUBMED   28398546
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037816.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18431.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..652
                     /product="RNase A-like domain-containing protein"
                     /calculated_mol_wt=71895
     Region          493..620
                     /region_name="CdiA-CT_Yk_RNaseA-like"
                     /note="C-terminal (CT) domain of the contact-dependent
                     growth inhibition (CDI) system protein CdiA (CdiA-CT) of
                     Yersinia kristensenii, and similar proteins; cl39768"
                     /db_xref="CDD:454353"
     Site            order(495,498..499,516..518,549,560,577,597,599,616..617,
                     619)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:411002"
     Site            order(499,510,617,619)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:411002"
ORIGIN      
        1 mkklthlffv vltllpfaat pvqthaqety tikaeqratt evvpelpsis ripvttqepd
       61 phnaalvplt ggvsfssfls pfsavgatls salvslpasa avvsailgag lgysfyqlgs
      121 slgvatadll ktnaslyels snnpalqqel aafatsgids ttstynfsqg lqkryaqdvt
      181 shalmreylt gttdhgayrf sindhpafrk lisygslste tartgvigrd asvadrmfie
      241 dqffllemvr vmetrvgsdt tlltisghny ghrgsngsfv yevelsvpms vlmsqiatqe
      301 dfleyiqqnt tfefgvietp sreiavqtaq qmaqayhtrt adiqknlaev laptenglsf
      361 dpsgiiatly gqtvvldatg kfvyadtrva vpeyqwgaid fayseaaipi ddsitidgrr
      421 gvldeetgdi vedgtgktlv egamgaawna lslarvleai knfkgddddd defewyspld
      481 lyydewyadg gkghtmerhv gqsedalrar leditysaaf htteqalifi nfaiytankk
      541 ylegtiklpl gdcslqdgnr viyrsyksia lgktlgwgfy rlnqdthiqy dsiyyakvii
      601 qrmpnivwkk rkyyiltayp dlrrtvkeep praapssskf lfifslkksn hh
//
LOCUS       WP_258078661             372 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Xanthomonas arboricola].
ACCESSION   WP_258078661
VERSION     WP_258078661.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 372)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 372)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 372)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..372
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=39640
     Region          1..366
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(83,113,115,147,149,352..354,356,358)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 miqdvarria qekiapsaeq fdrsgefple nirllgengl mgievpaeyg gaamdpisya
       61 lamieiaaad gahstivsvn nslfctgilk ngseaqkqly vraiaegaqi gafaltepqs
      121 gsdasamrcr avkqadgsfv ingkkswits gpvakyivlf avtepdkgsr gitafmvdad
      181 ragfhrgkte pklgirasat ceiefadyia qpeevlgveg egfktamsvl dagrigiasq
      241 avgiaraaye atlayvkerk afgaaigtfq mtqakiadmk ckldaalllt lraawlkgqg
      301 qkfgteaava kltaseaamw ithqavqihg gmgyskempl eryfrdakit eiyegtseiq
      361 rlviargetg lr
//
LOCUS       WP_258078667             656 aa            linear   BCT 02-MAR-2025
DEFINITION  TnsA endonuclease N-terminal domain-containing protein, partial
            [Enterococcus faecium].
ACCESSION   WP_258078667
VERSION     WP_258078667.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 656)
  AUTHORS   M Iyer,L., Anantharaman,V., Krishnan,A., Burroughs,A.M. and
            Aravind,L.
  TITLE     Jumbo Phages: A Comparative Genomic Overview of Core Functions and
            Adaptions for Biological Conflicts
  JOURNAL   Viruses 13 (1), 63 (2021)
   PUBMED   33466489
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 656)
  AUTHORS   Benler,S., Hung,S.H., Vander Griend,J.A., Peters,G.A., Rohwer,F.
            and Segall,A.M.
  TITLE     Gp4 is a nuclease required for morphogenesis of T4-like
            bacteriophages
  JOURNAL   Virology 543, 7-12 (2020)
   PUBMED   32056848
REFERENCE   3  (residues 1 to 656)
  AUTHORS   Steczkiewicz,K., Muszewska,A., Knizewski,L., Rychlewski,L. and
            Ginalski,K.
  TITLE     Sequence, structure and functional diversity of PD-(D/E)XK
            phosphodiesterase superfamily
  JOURNAL   Nucleic Acids Res 40 (15), 7016-7045 (2012)
   PUBMED   22638584
REFERENCE   4  (residues 1 to 656)
  AUTHORS   Hickman,A.B., Li,Y., Mathew,S.V., May,E.W., Craig,N.L. and Dyda,F.
  TITLE     Unexpected structural diversity in DNA recombination: the
            restriction endonuclease connection
  JOURNAL   Mol Cell 5 (6), 1025-1034 (2000)
   PUBMED   10911996
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020305.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08722.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..656
                     /product="TnsA endonuclease N-terminal domain-containing
                     protein"
     Region          <32..456
                     /region_name="SSL2"
                     /note="Superfamily II DNA or RNA helicase [Transcription,
                     Replication, recombination, and repair]; COG1061"
                     /db_xref="CDD:440681"
     Region          581..644
                     /region_name="Tn7_TnsA-like_N"
                     /note="TnsA-like endonuclease N terminal; pfam08722"
                     /db_xref="CDD:462579"
ORIGIN      
        1 ktlqqnpqdg snfniiisnn qkfiakqkhk qvtpteslfe tsqkgtnnff skilgdvlgn
       61 peiinesnie inhrfsklsr lpqigvfide ahhlygkelm dsigdnkskk ssslrytvnl
      121 ldgflreqgt hvvacynftg tpyvqnqtlp evvyayglse siqkrylkra divaykevre
      181 egfltdaitk fwnkysdnly eglkpkmaif asniaeinek ilpevekifi qlgipldtil
      241 vntekssnee irdfnnldvl gtagsqkqfi ilvqkgregw ncrslfsvam hrrpgkkvfv
      301 lqstmrclrs itdeqqtati flseenrkil neelasnyra niedlskksd redyrvhvnp
      361 pehkidlkrv rtvytlsere iqqpldfhlq eraeemkdrw gqevieqkla slsstekrtd
      421 fiditnkyqy snltliaeia rylnfsplev qriltesqdg leqilfwsnt ykqvvyeili
      481 pkifeykfki tksqitedne vvllkfpqgk nyykfsgkpe lvimdsdkql enyktksfha
      541 dtyvfdskpe relflqylen dtveeifftg mftskqgdfy iqyidpeans vrsyfpdfvv
      601 kkrdgsreii evkgdnkkdd pvvlakkaat eeqagqsgys yrmilgseim nnnyei
//
LOCUS       WP_258078716             388 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5694 domain-containing protein [Xanthomonas arboricola].
ACCESSION   WP_258078716
VERSION     WP_258078716.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039197.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18950.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..388
                     /product="DUF5694 domain-containing protein"
                     /calculated_mol_wt=41983
     Region          220..383
                     /region_name="DUF5694"
                     /note="Family of unknown function (DUF5694); pfam18950"
                     /db_xref="CDD:465929"
ORIGIN      
        1 mqpslpriah naraagrffd agsasarrlq rpahrwlwla liapciaqaq vdlsqldaem
       61 aaprtqvlvl gsvhlsqlpd gsdisaarlq plldrlaayk ptiittedls getcdlmrrh
      121 pavylpedtt tycpdtseaa ratgldvpta lgqvraalrs lpsaptpaqr rhlaalflas
      181 geppsalvqw lqlapteqrs gdgldaalva rlrsmeqrpn esyqiaarla arlglqrvhp
      241 addhtgdnvd lgdpaaygka iqaawdkaap rasamrehed qlasqgklle lyrainlpas
      301 qqlaiavdfr aalsegspqr ygyrymsgwe irnlrmvsnv rasfadqpga rvlavvgamh
      361 kpwfdnwlgq lqgvdivdaa qvlgadek
//
LOCUS       WP_258078698             531 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Enterococcus faecalis].
ACCESSION   WP_258078698
VERSION     WP_258078698.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Enterococcus faecalis"
                     /db_xref="taxon:1351"
     Protein         1..>531
                     /product="Ig-like domain-containing protein"
     Region          277..352
                     /region_name="Big_6"
                     /note="Bacterial Ig domain; pfam17936"
                     /db_xref="CDD:465576"
ORIGIN      
        1 mfftgkernl kfaikkkhgg ggaasviigc iifgsiafgg ttlayadevh nsinqdiqds
       61 gstiigends stksaeykmi heidgtkisn genskettts sgtilaeeai essnqknskt
      121 seveqdlhkd vsgsesvkqv etsdsikkse esavktlnld dsqentnsit tkaendalst
      181 vndekvlnes dsiiksipse tenvdnnsks dnrdlvensv ettkeimkea dkteiakrnd
      241 nisvlnagte sfndsdkirr skrdnespvp slsiqmpvtk eiyendstik gksepgvtik
      301 iykngielgs ikadddgnfe yplesqaiks dnysfvaekd gaksiessvn vvenkeivgn
      361 qrdaytpygf giynrglvtt ddgkkhytvd megnlaseay fdlaggtmyy sidekfapyv
      421 ekivldgkti isknpyelpn ktniwssgil stdkrgglvr aalvgrtngt idiyfkddtp
      481 qevlnseipf qvwarfkekk egvkndlisd fdlnillqnn klilskdtrg a
//
LOCUS       WP_258078790             207 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Xanthomonas arboricola].
ACCESSION   WP_258078790
VERSION     WP_258078790.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..207
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=21782
     Region          26..>185
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 msavgstssp vsataapaaa rsglaifila faafvivtte ylivgllpgl ardmeisisa
       61 agqlvtlfaf tvmlfgpplt awlshldrkr lfvmillvfa vsnavaalap niwvlafarf
      121 vpalalpvfw gtasetagql agpqhagrav srvylgisaa llfgiplgtv aansigwrga
      181 fwilapchwr wprrwrsgcr pwpaang
//
LOCUS       WP_258078764            1123 aa            linear   BCT 02-MAR-2025
DEFINITION  transglycosylase SLT domain-containing protein [Enterococcus
            faecium].
ACCESSION   WP_258078764
VERSION     WP_258078764.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 1123)
  AUTHORS   Koraimann,G.
  TITLE     Lytic transglycosylases in macromolecular transport systems of
            Gram-negative bacteria
  JOURNAL   Cell Mol Life Sci 60 (11), 2371-2388 (2003)
   PUBMED   14625683
REFERENCE   2  (residues 1 to 1123)
  AUTHORS   Mushegian,A.R., Fullner,K.J., Koonin,E.V. and Nester,E.W.
  TITLE     A family of lysozyme-like virulence factors in bacterial pathogens
            of plants and animals
  JOURNAL   Proc Natl Acad Sci U S A 93 (14), 7321-7326 (1996)
   PUBMED   8692991
REFERENCE   3  (residues 1 to 1123)
  AUTHORS   Thunnissen,A.M., Rozeboom,H.J., Kalk,K.H. and Dijkstra,B.W.
  TITLE     Structure of the 70-kDa soluble lytic transglycosylase complexed
            with bulgecin A. Implications for the enzymatic mechanism
  JOURNAL   Biochemistry 34 (39), 12729-12737 (1995)
   PUBMED   7548026
REFERENCE   4  (residues 1 to 1123)
  AUTHORS   Koonin,E.V. and Rudd,K.E.
  TITLE     A conserved domain in putative bacterial and bacteriophage
            transglycosylases
  JOURNAL   Trends Biochem Sci 19 (3), 106-107 (1994)
   PUBMED   8203016
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013618.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01464.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..1123
                     /product="transglycosylase SLT domain-containing protein"
                     /calculated_mol_wt=121276
     Region          <323..>544
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          687..1007
                     /region_name="SLT"
                     /note="SLT domain protein [Mobilome: prophages,
                     transposons]; COG3953"
                     /db_xref="CDD:443153"
     Region          914..1033
                     /region_name="LT_TF-like"
                     /note="lytic transglycosylase-like domain of tail
                     fiber-like proteins and similar domains; cd13402"
                     /db_xref="CDD:381605"
     Site            order(924,952..954,957,982,1003..1004)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:381605"
ORIGIN      
        1 mlglvdenaq svkdplelin eiigkiakhk deiklfgeal vimfavkkgy efitmlkeak
       61 ktltemtaie titdflgggg fsfgkkastk nignvgaeia etilpkggkg vatiaddale
      121 svsklgglak lskgvskvlp fagvlasate llgkgsassk lgafggslgg saagaaigta
      181 ilpgigtaig aglgglggte lgknlgkdig kgfksyapnl tnflgdighd itkkfsknig
      241 snakelskty tkemeklnki avktpkgdke lkkqkaqtte ifkdmsdsiq kyykkkekss
      301 ksdydyfvkn glmtqkeadk alakqkkndd eqkknhqkal ksmqvysgeh yanvekiekg
      361 gtkklqdiak kygkdskeyk kelnkeleee qekyaknmsk aqsklneqis ketkiasgkq
      421 ldilqdlkdh kgklsheemk tailnskeqr dtiikdakkt andsisaadk kyketvekad
      481 keryengtms kkqydevvkq akkerddavt aatekrdksi kkaqethkev vdqatqqage
      541 hkgavdgetg evvgswdemk tnmgsivegv ahsighliha lnkdwgndli nfkfgahakg
      601 ssgltedeia lvgeegfela hhpskgifpv gvsgpeirpl qagtsilphh mskeflamtk
      661 glpahkdgvw gtitnmfdwv kdkakdvwsf vsdgagkayd tiadklgvsd fldnlgdsae
      721 ykvaaggisn ikdkiieyaq nffdkfneen gggsfdgama dnvykylvdi anqtvskfgm
      781 sgitsgyrpg dpywhgkhqa idiaypssmn gsskyfdpan wvfenfadkv gyvitqgkvr
      841 drtgqsgqpa tgswepwpdn dhydhlhitg klgsgdifka gggsspagsg aerwrsqvid
      901 aakmvgfptd kghidriisq iqtesggnek avqggytdin titgdlakgl mqtisatfna
      961 ykmpghgnif ngydsilagl ryimaqygtg agffanigmg hgyadggein gpelawiged
     1021 paypkefmin pakpsaddli ikairsreqf rpasannvss nssgfltsei sesslqklsq
     1081 alnnrpvevi shldgkkvsk svdeytgssl arklytrgkn fng
//
LOCUS       WP_258078862              81 aa            linear   BCT 02-MAR-2025
DEFINITION  Rib/alpha-like domain-containing protein, partial [Enterococcus
            faecalis].
ACCESSION   WP_258078862
VERSION     WP_258078862.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 81)
  AUTHORS   Wastfelt,M., Stalhammar-Carlemalm,M., Delisse,A.M., Cabezon,T. and
            Lindahl,G.
  TITLE     Identification of a family of streptococcal surface proteins with
            extremely repetitive structure
  JOURNAL   J Biol Chem 271 (31), 18892-18897 (1996)
   PUBMED   8702550
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020018.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08428.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Enterococcus faecalis"
                     /db_xref="taxon:1351"
     Protein         <1..>81
                     /product="Rib/alpha-like domain-containing protein"
     Region          <6..54
                     /region_name="rib_alpha"
                     /note="Rib/alpha/Esp surface antigen repeat; TIGR02331"
                     /db_xref="CDD:131384"
ORIGIN      
        1 gtitnvgdip etttpgekpa vevtvtypdg ttdtvevpve vtktpdadky eptgekitvp
       61 egtpiteddv kgkvtipegs g
//
LOCUS       WP_258078845             137 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase, partial [Xanthomonas
            arboricola].
ACCESSION   WP_258078845
VERSION     WP_258078845.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 137)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 137)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         <1..137
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <1..118
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(74,77,100,109)
                     /site_type="active"
                     /db_xref="CDD:271175"
ORIGIN      
        1 gttykvpals rwcpvaatma wvaaaalhag plfravdqwg giaatplhpn slvrllrrif
       61 reaglsspna ysghslrrgf agwanangwd vkalmeyvgw rdvqsamryi dgadpfarqr
      121 ieaslpeapa lprpatt
//
LOCUS       WP_258078901             149 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Xanthomonas arboricola].
ACCESSION   WP_258078901
VERSION     WP_258078901.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 149)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 149)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..149
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=16486
     Region          4..149
                     /region_name="yhbS"
                     /note="Predicted N-acetyltransferase YhbS [General
                     function prediction only]; COG3153"
                     /db_xref="CDD:442387"
ORIGIN      
        1 mdtirpyqpr dfdacmalfd anvpvffsag eradfasfls hhaaawhyql lergnavaga
       61 agyaigadgt taslcwgmvh prlhrcgvgt qlllarleal rqmpdvrrvl ldtsqhtrlf
      121 ytrfgfvvqq vtvdgyapgl erwdmaldl
//
LOCUS       WP_258078975              86 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY-family carbohydrate kinase, partial [Enterococcus durans].
ACCESSION   WP_258078975
VERSION     WP_258078975.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus durans
  ORGANISM  Enterococcus durans
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 86)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 86)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02782.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Enterococcus durans"
                     /db_xref="taxon:53345"
     Protein         <1..86
                     /product="FGGY-family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <1..86
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 asnneylmqf qtdilnvpiq raenlettal gaaflaglav gywkdtdeir efyeagkmfe
       61 vempeerrek lysgwkkava atqafe
//
LOCUS       WP_258079075              74 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Enterococcus faecium].
ACCESSION   WP_258079075
VERSION     WP_258079075.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00872.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..>74
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          4..>73
                     /region_name="Transposase_mut"
                     /note="Transposase, Mutator family; cl27632"
                     /db_xref="CDD:474953"
ORIGIN      
        1 nftteimetl inkgdldelf rchlelavns llqaeltafl dyekydragf nsgnsrngny
       61 srsfrteyge lnlv
//
LOCUS       WP_258079125            1499 aa            linear   BCT 02-MAR-2025
DEFINITION  SpaA isopeptide-forming pilin-related protein [Enterococcus
            faecalis].
ACCESSION   WP_258079125
VERSION     WP_258079125.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 1499)
  AUTHORS   Kang,H.J., Paterson,N.G., Gaspar,A.H., Ton-That,H. and Baker,E.N.
  TITLE     The Corynebacterium diphtheriae shaft pilin SpaA is built of tandem
            Ig-like modules with stabilizing isopeptide and disulfide bonds
  JOURNAL   Proc Natl Acad Sci U S A 106 (40), 16967-16971 (2009)
   PUBMED   19805181
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2009 Oct 27;106(43):18427]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037639.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17802.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1499
                     /organism="Enterococcus faecalis"
                     /db_xref="taxon:1351"
     Protein         1..1499
                     /product="SpaA isopeptide-forming pilin-related protein"
                     /calculated_mol_wt=163594
     Region          354..479
                     /region_name="DUF11"
                     /note="Domain of unknown function DUF11; pfam01345"
                     /db_xref="CDD:460168"
     Region          <1070..>1281
                     /region_name="ClfA"
                     /note="Clumping factor A-related surface protein, MSCRAMM
                     (microbial surface components recognizing adhesive matrix
                     molecules) family, DEv-IgG fold [Cell
                     wall/membrane/envelope biogenesis]; COG4932"
                     /db_xref="CDD:443959"
     Region          1293..1426
                     /region_name="RrgB_K2N_iso_D2"
                     /note="fimbrial isopeptide formation D2 domain; TIGR04226"
                     /db_xref="CDD:275067"
ORIGIN      
        1 mkwkkglsiv gtlvmllgqn iagvaafaet vtnnnsvetq diyfennetk lakldvtqge
       61 dtavtlvdtn kedqevtvsl pssvtlnqav tntqlgdass anydqnanev kvifknkeqd
      121 tkkvnlvltg kdankgtttp mfaeairldg qtyrsvvlpv svipteannk qanseattte
      181 ndgepaqktp tqndapsvrs gnmnvdldis pvsdsvlsge dlvyalnfkv tgsqtiyhna
      241 kilvtlptgy slnqdlnniq iagvtptfda ttgvlsyvfq eltagqtstv nlkvgtingt
      301 tsngsevklt adfsadefsg nakteateai nassslstsk tylktldsng dekdtpplag
      361 dtgiwnikvs aakkttglly fkegskitvv dtlpdgmtyv sdnangtynn nektitwefd
      421 apslaeqqva idtlfekein vtvkfnndid nfqkftnkvh aegidldgnt vksdasanvs
      481 agksdpneip pgnlfwpnhg gpvdgkandg gafnsnnpdp vvydtallkf svsavpgtas
      541 sptkdfkkyd itydvdpnle vyslpfagam ryqpdtsypd nvdmkkvpia tiyltvngqe
      601 rkaldhveir sknfsrsdlg lkdgehvsqi rivndympag lisgyfypif tikkdftgtv
      661 tnkvkydvvg ynangdevsw nrdgdyddin sltgprtaqv vptpadtlpi vrtsvrfdns
      721 nggiikegen rvtgnfytdk sssvslnkpl esvvllpvgv kvktddpeys vkntanwdnk
      781 tqdgnntngt ikiitdnyns snqqlvkiqw neeklipgkd lgygfnievs kgaptplrvd
      841 tygfsgdekf tvpsgastlt dsylqvdsdd lnsngnntqn rvlssnqyrm lkenqiktek
      901 lvkgekdsdy skfghttlgg qidyqlnmen tgndignfvm mdvlpsendl gitdntergs
      961 kftpvltgpi tipnewqdkv tieyseamnp srqdldkdvn ypsttdhlvd pagaqapnwk
     1021 aekevtdwsk ihsyivhlnd gqwtkgdkit ltfsmkapek lssdltnpki dektraawns
     1081 faysannsqv vepervgvvv dyvgsviltk tdgktgeelk gaefelqdkd gkklqeglvt
     1141 ddkgqikvdn lapgdyqfve tkapkdyqld qtpvpftier gqieavqvkm dntltpgsvv
     1201 ltkvddktge alkgaefelq dkdgkklqeg lvtddkgqik vdnlapgdyq fvetkapady
     1261 qldstpvpft iergqieavq vkmtnkrvip pvdpdihkdv edeqhidltn rnqkfdwhvy
     1321 ttfgsdtsnw kqasvvdpvn slleilnvti tdengkdvsk ngelkiegnk itftlnkkdg
     1381 sygylanhvy kmtittkird dgtddqlapy inngkgipnq adlnfgdgdt khseiptvtp
     1441 pkntvpdnsh ssdmvvpskg vfphtgentt msnllvlvgl iiigslavlv viinkkkss
//
LOCUS       WP_258079232             807 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3772 domain-containing protein [Xanthomonas arboricola].
ACCESSION   WP_258079232
VERSION     WP_258079232.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024021.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12607.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..807
                     /product="DUF3772 domain-containing protein"
                     /calculated_mol_wt=86730
     Region          <27..>187
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          121..181
                     /region_name="DUF3772"
                     /note="Protein of unknown function (DUF3772); pfam12607"
                     /db_xref="CDD:432664"
     Region          519..795
                     /region_name="MscK"
                     /note="Small-conductance mechanosensitive channel MscK
                     [Cell wall/membrane/envelope biogenesis]; COG3264"
                     /db_xref="CDD:442495"
ORIGIN      
        1 mqrvlllval wmvcvgaava qdddtlleta qtqldnmqkv ltqadagmen adteqlgklt
       61 ddvagaqrqa qdlvrtleqp lkelngrleg lgvaapnepa dlakqrkalt kerdqlnaef
      121 iratllvsna keladrlere rvqrfsvkls trvasplspt lwkqigqqwp ddrarlqals
      181 dktvqmvqag iaangvgglm taaviallla lplriflrhl grryaasrap ggrlrrsgla
      241 lwfllvgtlt lgiaafvlve giralgelpd dldqlltgfv aisvvaafvg slsasllmkh
      301 qpswrlfpld datvdrlrvh clataaviwf sgmamkinev agsspaltta tdalaallya
      361 glilsalagl slslrahaan agvadpdsda pppvvsrggg fivlirllgh lavifaliaa
      421 lfgylnlalf verqiiwitl vcsllgllvv faddlmtwlf kpdgrfsral shalsigsgr
      481 lvqlgllisa atrvllvllg iavlltpyga nisvvtdwae niahgitigk elvitpgdvf
      541 ralcvfllgm glvhvvqqwl lntylpktel ddgarnsist varylgwliv vvwgltalgl
      601 dlkrlalvls alsvgigfgl qaitqnfvsg lillaerpvk igdwvrigdq egdvrkisvr
      661 ateiqvgdrs tlivpnseli tksvrnmtls npmgrvqlqf svpletdvak vrnmllelfa
      721 ehtkvladpa psvfidslag ghvnfnsfay vrsprdsygv rselffallq rmetagialq
      781 spqeirfsra gaavardpad gtpased
//
LOCUS       WP_258079284             621 aa            linear   BCT 02-MAR-2025
DEFINITION  SIR2 family protein [Xanthomonas arboricola].
ACCESSION   WP_258079284
VERSION     WP_258079284.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024685.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13289.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..621
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..621
                     /product="SIR2 family protein"
                     /calculated_mol_wt=68579
     Region          29..>148
                     /region_name="SIR2"
                     /note="SIR2 superfamily of proteins includes silent
                     information regulator 2 (Sir2) enzymes which catalyze
                     NAD+-dependent protein/histone deacetylation, where the
                     acetyl group from the lysine epsilon-amino group is
                     transferred to the ADP-ribose moiety of NAD+; cl00195"
                     /db_xref="CDD:444738"
     Region          138..291
                     /region_name="SIR2"
                     /note="SIR2 superfamily of proteins includes silent
                     information regulator 2 (Sir2) enzymes which catalyze
                     NAD+-dependent protein/histone deacetylation, where the
                     acetyl group from the lysine epsilon-amino group is
                     transferred to the ADP-ribose moiety of NAD+; cl00195"
                     /db_xref="CDD:444738"
ORIGIN      
        1 mtksiqvisa skfattfslr pelhawllga gasaasgipt gydmildfka klycqetrfp
       61 rrnvdpsdpl wvqrideffs rtpllpppnd pteyeaafea iypqethrrq yiddaiskgt
      121 pcfghrmlag litaaktpcv fttnfdplie dssllaaslm ppgtaakprv atldsanvat
      181 rcldeadwpl vaklhgdyrs tslknttsel asqdkdmrra mveackrfgl ivvgysgrdf
      241 svmealesvl ayenpfpsgl ywcassrskl lpavndflek aalagvnvfi iesatfdela
      301 gdllnqislp aplldhvlsf qpaqlavpip artaaarkfp vlrlsallve svpntarkit
      361 lghassifev remlkaskcr aavamggnel aafgkdaeil aslhtlnptl nghwtldptr
      421 dswalgltyd allralarrr pliprlkrsg hslmvtsare getdeqrhrr esqlsklraa
      481 ygseltgtks grnyneaisv rleeiegrww cgfdpytave vprderaaps daaesdplaw
      541 ssqrrpdpta dwrrerwatk ynsawasiid awanlltspr gitfqafgie ahegvdaafr
      601 ispltgfsrp ghhdkyfdrr q
//
LOCUS       WP_258079321             384 aa            linear   BCT 02-MAR-2025
DEFINITION  XVIPCD domain-containing protein [Xanthomonas arboricola].
ACCESSION   WP_258079321
VERSION     WP_258079321.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 384)
  AUTHORS   Oka,G.U., Souza,D.P., Cenens,W., Matsuyama,B.Y., Cardoso,M.V.C.,
            Oliveira,L.C., da Silva Lima,F., Cuccovia,I.M., Guzzo,C.R.,
            Salinas,R.K. and Farah,C.S.
  TITLE     Structural basis for effector recognition by an antibacterial type
            IV secretion system
  JOURNAL   Proc Natl Acad Sci U S A 119 (1) (2022)
   PUBMED   34983846
REFERENCE   2  (residues 1 to 384)
  AUTHORS   Souza,D.P., Oka,G.U., Alvarez-Martinez,C.E., Bisson-Filho,A.W.,
            Dunger,G., Hobeika,L., Cavalcante,N.S., Alegria,M.C., Barbosa,L.R.,
            Salinas,R.K., Guzzo,C.R. and Farah,C.S.
  TITLE     Bacterial killing via a type IV secretion system
  JOURNAL   Nat Commun 6, 6453 (2015)
   PUBMED   25743609
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 384)
  AUTHORS   Alegria,M.C., Souza,D.P., Andrade,M.O., Docena,C., Khater,L.,
            Ramos,C.H., da Silva,A.C. and Farah,C.S.
  TITLE     Identification of new protein-protein interactions involving the
            products of the chromosome- and plasmid-encoded type IV secretion
            loci of the phytopathogen Xanthomonas axonopodis pv. citri
  JOURNAL   J Bacteriol 187 (7), 2315-2325 (2005)
   PUBMED   15774874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042736.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20410.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..384
                     /product="XVIPCD domain-containing protein"
                     /calculated_mol_wt=40925
     Region          248..353
                     /region_name="DUF6696"
                     /note="Domain of unknown function (DUF6696); pfam20410"
                     /db_xref="CDD:466559"
ORIGIN      
        1 megneeskip qpkqvgassa gapptsplkd paltpflaqs ptlqaglsql krdgigvvwg
       61 nagggtyivp dkeividqna sgkggrlaas lsheighhrf aeppdysskq ayvnnmlrge
      121 aaatlsnalv rreilnnqgp digiagsgnr pqqyeaiadq qmagritrna alnqiaqifk
      181 teqpsvgpsk tyeqyygdyy dkhivpwklk qgrpepgavs diassdvkqg glgpespltp
      241 pktpllpsqp ghadhtlyqq iksgvmqlda qhgkewdgas qrmtasllal akeeglsrvd
      301 hvvlnnptgq laggekvfvv qgalndpahq raqmptvdav qapenqsfdr lqainqtqaq
      361 areqqqaleq sqqavtqtgp siar
//
LOCUS       WP_258079378             187 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Xanthomonas arboricola].
ACCESSION   WP_258079378
VERSION     WP_258079378.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 187)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..>187
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          12..177
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(30..31,33..34,37,41,43..49,142..147,153..154,
                     156..157)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176102"
ORIGIN      
        1 mngmltdfrd kpagtiritt aghaadayiw palsnvlpdy ldlkievtvd ygladivaer
       61 ydigirlgdq vakdmiavpi spmqrmavva vpgyfvhhsi paapaelarh nciglrlpth
      121 ggllpwdfek dgreikvrve gqwtfngssa ilrtalaggg laflpetmal ghiaagqrgt
      181 qdgaaav
//
LOCUS       WP_258079382             146 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein, partial
            [Xanthomonas arboricola].
ACCESSION   WP_258079382
VERSION     WP_258079382.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 146)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         <1..146
                     /product="LysR substrate-binding domain-containing
                     protein"
     Region          <1..104
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 ldypwviatt gtpvrarweq mfrdqgiepp alriecgael tirglllegd wltlmsrdqf
       61 lferragllc eigragpqlr rqigmtlrsd whptraqsaf vqtlrqvcae rvqpadaqgg
      121 pfrycapida paplrsrtgr seseps
//
LOCUS       WP_258079393             282 aa            linear   BCT 02-MAR-2025
DEFINITION  glutamate--tRNA ligase family protein, partial [Xanthomonas
            arboricola].
ACCESSION   WP_258079393
VERSION     WP_258079393.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 282)
  AUTHORS   Rath,V.L., Silvian,L.F., Beijer,B., Sproat,B.S. and Steitz,T.A.
  TITLE     How glutaminyl-tRNA synthetase selects glutamine
  JOURNAL   Structure 6 (4), 439-449 (1998)
   PUBMED   9562563
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012951.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00749.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         <1..282
                     /product="glutamate--tRNA ligase family protein"
                     /GO_function="GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
     Region          <1..282
                     /region_name="PRK05347"
                     /note="glutaminyl-tRNA synthetase; Provisional"
                     /db_xref="CDD:235424"
ORIGIN      
        1 ltalveeqlv dgwddprmyt lqglrrrgyt paamrlfvdr vgiskqnsli dfsvlegclr
       61 edldaaaarr mavvdplklv ltnlpeghve tlsfsnhpkd esfgtrkvpf arelwiered
      121 faevppkgwk rlvpggeirl rgagiarvde vikndageii elrgwldpes rpgmeganrk
      181 vkgtihwvsa thaveaeirl ydrlfsvekp ddesegktyr dylnpeskrs vrgyvepsaa
      241 qaapeqsfqf ertgyfvadr rdhsaatpvf nrsvtlrdtw ak
//
LOCUS       WP_258079418             559 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Xanthomonas
            arboricola].
ACCESSION   WP_258079418
VERSION     WP_258079418.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 559)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..>559
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          6..53
                     /region_name="TubC_N"
                     /note="TubC N-terminal docking domain; pfam18563"
                     /db_xref="CDD:436580"
     Region          73..496
                     /region_name="LCL_NRPS-like"
                     /note="LCL-type Condensation (C) domain of non-ribosomal
                     peptide synthetases(NRPSs) and similar domains including
                     the C-domain of SgcC5, a free-standing NRPS with both
                     ester- and amide- bond forming activity; cd19531"
                     /db_xref="CDD:380454"
ORIGIN      
        1 mdlaallhel grrqvmlsve egrlrsnapr gaitpelada irshkdalia vlergrgnga
       61 laaiqpaaka scyplsfaqr rlwfvdllgd gspqynlpga lrlrgrldva alqraleall
      121 erhailrtvy adhdgepvqr vlpatsltmv rhaldgleeg arssaldall qaqasavfdl
      181 sgdvllrval ahmgeddhvl ffsthhiagd gwsmgllvqd mavlysafve grdnplpaps
      241 ltyadyacwq qqrladgsld aslrfwcqgl rdapallelp gdrarparps hrgaslplrl
      301 apehaqllrn wasahgatlf mallaawsvl lsrlsgqgev vigtpvanrq rretetlvgf
      361 fvntlalrvn paaassvael itqvrdatlr aydhqdvpfe qvveelrpvr dlghhpvfqt
      421 mlaldntpgg ralvlpgldv qsvsmphqsa hcdltatfve nadgsvggai eyatdlfdaa
      481 tiqrwagylq rllqalpdae gqpvaalpml serereqlvh gfnatarayp aqstiaevfa
      541 acaarrgeai alcdadhal
//
LOCUS       WP_258079440              84 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase, partial [Xanthomonas arboricola].
ACCESSION   WP_258079440
VERSION     WP_258079440.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 84)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 84)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..>84
                     /product="aldo/keto reductase"
     Region          1..>63
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
ORIGIN      
        1 mqyrrlgstg lqlsalsfga wvtfgkqigr searnliaaa wdnginffdn aevyargrae
       61 ehlarhavti arqaqvgdhi ahhf
//
LOCUS       WP_258079324             124 aa            linear   BCT 02-MAR-2025
DEFINITION  dihydrodipicolinate synthase family protein, partial [Xanthomonas
            arboricola].
ACCESSION   WP_258079324
VERSION     WP_258079324.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 124)
  AUTHORS   Mirwaldt,C., Korndorfer,I. and Huber,R.
  TITLE     The crystal structure of dihydrodipicolinate synthase from
            Escherichia coli at 2.5 A resolution
  JOURNAL   J Mol Biol 246 (1), 227-239 (1995)
   PUBMED   7853400
REFERENCE   2  (residues 1 to 124)
  AUTHORS   Izard,T., Lawrence,M.C., Malby,R.L., Lilley,G.G. and Colman,P.M.
  TITLE     The three-dimensional structure of N-acetylneuraminate lyase from
            Escherichia coli
  JOURNAL   Structure 2 (5), 361-369 (1994)
   PUBMED   8081752
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012904.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00701.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         <1..124
                     /product="dihydrodipicolinate synthase family protein"
                     /GO_function="GO:0016829 - lyase activity [Evidence IEA]"
     Region          <4..106
                     /region_name="TIM-like beta/alpha barrel domains"
                     /note="A large family of domains similar to triose
                     phosphate isomerase (TIM) which, in general, share an
                     eight beta/alpha closed barrel structure; cl21457"
                     /db_xref="CDD:473867"
ORIGIN      
        1 sesfvvlsgd dgsaaqamls gadglisvas nalpsayrrl cdlardgqre aattwdarls
       61 eyhsfcgies npipvkallq ragighglrl pllplsaahq paadrlaada valealssre
      121 mlaa
//
LOCUS       WP_258079523             388 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5694 domain-containing protein [Xanthomonas arboricola].
ACCESSION   WP_258079523
VERSION     WP_258079523.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039197.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18950.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..388
                     /product="DUF5694 domain-containing protein"
                     /calculated_mol_wt=41892
     Region          220..383
                     /region_name="DUF5694"
                     /note="Family of unknown function (DUF5694); pfam18950"
                     /db_xref="CDD:465929"
ORIGIN      
        1 mqpspsriah saraaarffd agsasarqlq rpahcwlwla livpciaqaq vdlsqldaem
       61 aaprtqvlvl gsvhlsqlpk gsdiraarlq plmdrlaaya ptiittedls getcdlmrrh
      121 pavylpedit tycpdtgeaa ratgldvpaa lgqvrvalrs lpsaptpaqr rhlaalflas
      181 geppsalvqw lqlapaeqrs gdgldaalva rlrsmeqrpn esyqiaarla arlglqrvhp
      241 addhtgdnvd lgdpaaygka iqaawdkaap raramrehed qlasrgklle lyrainlpas
      301 qqlaiavdfr aalsegspqh ygyrymsgwe irnlrmvsnv rasfaeqpga kvlavvgamh
      361 kpwfdnwlgq lqgvdivdaa qvlgsdgq
//
LOCUS       WP_258079588             649 aa            linear   BCT 02-MAR-2025
DEFINITION  SpoIIE family protein phosphatase [Xanthomonas arboricola].
ACCESSION   WP_258079588
VERSION     WP_258079588.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 649)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..649
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=70514
     Region          43..192
                     /region_name="PDC1_MCP_like"
                     /note="first PDC (PhoQ/DcuS/CitA) domain of
                     methyl-accepting chemotaxis proteins and similar domains;
                     cd12913"
                     /db_xref="CDD:350338"
     Region          195..629
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
ORIGIN      
        1 mrvllaatav lvvlltllgt vfylgarael veaartevdg lteqtarsla amldsvqvsg
       61 rtlaasssav glqpfnlral llatlsgdpd igaarliiep rtqkardagf vwyvhrdgar
      121 vleksvqdlg ydyrampwyl rtqrdgraww sepylttdgg salytsynlp lrrpgdavda
      181 apvgmvsvdl plqhlrdiid qlprdigirp mllspegmll fgpdpalnlr ytleryvahs
      241 rpdllplqra vaagqpisfa htapdgerfl thsavvgrsg wtfvlsaseg yvlaglnwla
      301 awvalaallg avawwwlmgr itrkltrpie eltdtaehfr rgefeyplph ierrdevgvm
      361 arafdsarda irdhivqige mtaarermhs elqiareiqq amlpsgrtfd ragshletca
      421 wlepakavgg dfyhfvetep gllwfvvgdv sdkgvpaalf maravsvlei aarrhtrpds
      481 iliaastrla enndtcmfat vlcgvinvvs gdywlasagh eppvlididg sarplpldtg
      541 aplgiepqva ypvlqgrmca gqtllgytdg vteamdeqga syglerllga lrprrsaaaq
      601 ckaviasiah ftgqadpydd itllairlrq ehagpvadag rdapgkatt
//
LOCUS       WP_258079609             179 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4113 domain-containing protein [Xanthomonas arboricola].
ACCESSION   WP_258079609
VERSION     WP_258079609.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024830.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13438.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..179
                     /product="DUF4113 domain-containing protein"
                     /calculated_mol_wt=19318
     Region          <3..98
                     /region_name="PolY"
                     /note="Y-family of DNA polymerases; cl28996"
                     /db_xref="CDD:452909"
     Region          127..177
                     /region_name="DUF4113"
                     /note="Domain of unknown function (DUF4113); pfam13438"
                     /db_xref="CDD:463876"
ORIGIN      
        1 mkitvsrsfg twvsdpqdts ealatlamra teklrarglt ssaigifaet dpfkpgvpqh
       61 npsrtaplas atsdsrivlt tvrrliqgfm regfaykrpa cawmdlakpe dlqgdlftta
      121 rigdeklmsa ldatnrrfrr gtaglgasgw qnspawasrq kllsgrftts laglpratc
//
LOCUS       WP_258078444              73 aa            linear   BCT 02-MAR-2025
DEFINITION  CAT RNA binding domain-containing protein [Enterococcus faecium].
ACCESSION   WP_258078444
VERSION     WP_258078444.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 73)
  AUTHORS   Yang,Y., Declerck,N., Manival,X., Aymerich,S. and Kochoyan,M.
  TITLE     Solution structure of the LicT-RNA antitermination complex: CAT
            clamping RAT
  JOURNAL   EMBO J 21 (8), 1987-1997 (2002)
   PUBMED   11953318
REFERENCE   2  (residues 1 to 73)
  AUTHORS   Declerck,N., Vincent,F., Hoh,F., Aymerich,S. and van Tilbeurgh,H.
  TITLE     RNA recognition by transcriptional antiterminators of the BglG/SacY
            family: functional and structural comparison of the CAT domain from
            SacY and LicT
  JOURNAL   J Mol Biol 294 (2), 389-402 (1999)
   PUBMED   10610766
REFERENCE   3  (residues 1 to 73)
  AUTHORS   van Tilbeurgh,H., Manival,X., Aymerich,S., Lhoste,J.M., Dumas,C.
            and Kochoyan,M.
  TITLE     Crystal structure of a new RNA-binding domain from the
            antiterminator protein SacY of Bacillus subtilis
  JOURNAL   EMBO J 16 (16), 5030-5036 (1997)
   PUBMED   9305644
REFERENCE   4  (residues 1 to 73)
  AUTHORS   Manival,X., Yang,Y., Strub,M.P., Kochoyan,M., Steinmetz,M. and
            Aymerich,S.
  TITLE     From genetic to structural characterization of a new class of
            RNA-binding domain within the SacY/BglG family of antiterminator
            proteins
  JOURNAL   EMBO J 16 (16), 5019-5029 (1997)
   PUBMED   9305643
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015107.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03123.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..73
                     /product="CAT RNA binding domain-containing protein"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /calculated_mol_wt=8222
     Region          24..70
                     /region_name="CAT_RBD"
                     /note="CAT RNA binding domain; smart01061"
                     /db_xref="CDD:215004"
ORIGIN      
        1 mrillwkqil fgcflslkge eqpmqviail nhnaiiakse egkwvlikkg igfgrkigdp
       61 inerdvesvy qki
//
LOCUS       WP_258079733            1541 aa            linear   BCT 02-MAR-2025
DEFINITION  putative Ig domain-containing protein [Xanthomonas arboricola].
ACCESSION   WP_258079733
VERSION     WP_258079733.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 1541)
  AUTHORS   Bentley,S.D., Maiwald,M., Murphy,L.D., Pallen,M.J., Yeats,C.A.,
            Dover,L.G., Norbertczak,H.T., Besra,G.S., Quail,M.A., Harris,D.E.,
            von Herbay,A., Goble,A., Rutter,S., Squares,R., Squares,S.,
            Barrell,B.G., Parkhill,J. and Relman,D.A.
  TITLE     Sequencing and analysis of the genome of the Whipple's disease
            bacterium Tropheryma whipplei
  JOURNAL   Lancet 361 (9358), 637-644 (2003)
   PUBMED   12606174
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017183.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05345.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1541
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..1541
                     /product="putative Ig domain-containing protein"
                     /calculated_mol_wt=153257
     Region          25..>1165
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          655..1529
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          1269..1519
                     /region_name="Autotransporter"
                     /note="Autotransporter beta-domain; pfam03797"
                     /db_xref="CDD:461054"
ORIGIN      
        1 mfvlfammll apgwamaqas tycptlnatv vqggsvqidv ttcdgtgadd igigwngvqp
       61 phgtlvvpnp sgaqgtqivt ythngdsats dtfpledgrg dtitvnitit pnqptlsinn
      121 vsvnegnagt tnatftvsls qpagtggvsf diatadgtat agvdyvassl tgqtipagss
      181 satftvlvng dtlsepnetf fvnvsnvtga svgdgqgqgt ivnddalpal siddvsvneg
      241 nsgtttatft vslsaasgqt vsvnyitadg tatagsdyaa rsgtltfapg vtaqgvaitv
      301 ngdtavepne tfsvglsgas nasiaratgt gtivnddvvv vvgpaslpaa tagsaysqal
      361 sasggtapyt faitagalpa glslsaggvl sgtptasggf nftatatdsg gsptsgaray
      421 tltvavattt fpatslpagt agqayssaln patggvapyt yavtagalpa gitldgssga
      481 ltgtpgsvgs fsfsvtatds ttgtpsqatr sytltiaapp ivvapsalps atrgtaysqt
      541 lsasggtapy tyalasgtlp agitlasngr lsgtatvegs lnftvtatda gsftgnqayt
      601 ltvagpnlvl pastlpagta gqaysaaitp atggtapyty altggvlpag vvvdaatgal
      661 sgtptvagtf nftltvsdst pipaaqasrs ytltiaapvv viapttlpaa trgtaysqtl
      721 sasggtapyt yavsagslpa gitlasngtl sgtatvegsf nvtvtatdan tftatqayal
      781 tvagpnlalp astlpagtag qayaatiasa tggtapyrya ltagalpngv vvdaatgals
      841 gtptlsgtfn ftltatdstp spavqasqny svtiaaatlv laqptlppav rgsaynqvlt
      901 asggvapyry siasgtlpag ltlasdgtls gtpttqgtss ftiavadagn asatqaysft
      961 vsdaapvava dvaatmsdaa vsvavtandt gnittiaiat aptngtavvn glelvytpaa
     1021 gfvgtdvvsy tvtgsggtsa aatvtiavna rpvavsvtaa avpgeaqqvd ltrnatggpf
     1081 vaaavvavlp asagtatitq vgglataaaa rasgpspaaa amaetptfml tftpnpafvg
     1141 qatvqftlsn afatsvpanv vftiaprrdp svdaevrgli daqsestrrf araqidnfqr
     1201 rleathrggs tfsnavsfqp tshcrqadrg isaqpcspdt qeadndfrda pavassgtst
     1261 aqgqgdlglw vggairsgsl dkqsnsngvd fqtdglsvga dyrvaqslai gaglgwgrdd
     1321 sdvgrngshs kataytmaly asfhpgkaff fdtlvgyqll sydlrryvtd dasmaegnrd
     1381 gkqwiaslst gadlqrgelq itpyarldva ratldgyved gvapfalryd dmdvatttgn
     1441 lglrlewrre vawgrltpql rveyqrdfqg rgdatlsyad lnggpfyrag qsafdrnrlm
     1501 vgigaallte qglstrleyr gitdgdsnnd qtwminlekk y
//
LOCUS       WP_258079836             324 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase [Nocardia cyriacigeorgica].
ACCESSION   WP_258079836
VERSION     WP_258079836.1
KEYWORDS    RefSeq.
SOURCE      Nocardia cyriacigeorgica
  ORGANISM  Nocardia cyriacigeorgica
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 324)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 324)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Nocardia cyriacigeorgica"
                     /db_xref="taxon:135487"
     Protein         1..324
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=35094
     Region          2..298
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     Site            order(4..6,35,40,65,106,136..137,162,190..196,249,
                     266..269,274,277..278)
                     /site_type="active"
                     /db_xref="CDD:381296"
     Site            order(35,40,65,106)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381296"
ORIGIN      
        1 malgamnfgs igrtgqdeat amvdaaldag inlidtadmy grgeseemvg raiagrrddi
       61 vlatkagmpm ddernhrgss rrwlvqaldd slrrlgvdhi dlyqihrwdp stsdeetlsa
      121 ltdlqragki ryfgsstfpa yriieaqwav rehrlgryvt eqpaysilqr gveahvlpva
      181 eqyglgvlvw splasgwlsg airagreitt srstfmpdry dltvpankak mdaveqlaal
      241 addagltmiq lalgfvtahp avttaligpr tmdhlrsqla aadtvltaev ldaidaivap
      301 gvdlaphekh datpalldsg lrrr
//
LOCUS       WP_258079837            5143 aa            linear   BCT 02-MAR-2025
DEFINITION  toxin glutamine deamidase domain-containing protein, partial
            [Nocardia cyriacigeorgica].
ACCESSION   WP_258079837
VERSION     WP_258079837.1
KEYWORDS    RefSeq.
SOURCE      Nocardia cyriacigeorgica
  ORGANISM  Nocardia cyriacigeorgica
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 5143)
  AUTHORS   Nishide,A., Kim,M., Takagi,K., Himeno,A., Sanada,T., Sasakawa,C.
            and Mizushima,T.
  TITLE     Structural basis for the recognition of Ubc13 by the Shigella
            flexneri effector OspI
  JOURNAL   J Mol Biol 425 (15), 2623-2631 (2013)
   PUBMED   23542009
REFERENCE   2  (residues 1 to 5143)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 5143)
  AUTHORS   Sanada,T., Kim,M., Mimuro,H., Suzuki,M., Ogawa,M., Oyama,A.,
            Ashida,H., Kobayashi,T., Koyama,T., Nagai,S., Shibata,Y., Gohda,J.,
            Inoue,J., Mizushima,T. and Sasakawa,C.
  TITLE     The Shigella flexneri effector OspI deamidates UBC13 to dampen the
            inflammatory response
  JOURNAL   Nature 483 (7391), 623-626 (2012)
   PUBMED   22407319
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026980.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15644.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..5143
                     /organism="Nocardia cyriacigeorgica"
                     /db_xref="taxon:135487"
     Protein         1..>5143
                     /product="toxin glutamine deamidase domain-containing
                     protein"
     Region          <433..>521
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     Region          615..>859
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     Region          <977..1058
                     /region_name="Gln_amidase"
                     /note="Papain fold toxin 1, glutamine deamidase;
                     pfam15644"
                     /db_xref="CDD:434830"
     Region          1278..1416
                     /region_name="PoNe_DUF637"
                     /note="Polymorphic Nuclease effector (PoNe) co-occurring
                     with an N-terminal DUF637 domain; cd20739"
                     /db_xref="CDD:410648"
     Region          <1291..1832
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          1778..1912
                     /region_name="Gln_amidase"
                     /note="Papain fold toxin 1, glutamine deamidase;
                     pfam15644"
                     /db_xref="CDD:434830"
     Region          <1935..2134
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          <4541..5095
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
ORIGIN      
        1 maidfptvlg wvagtdwpdg neddmrslad dwraaaaaiq eviadvraak tvslnaypdg
       61 eapkdiakaf dsmlyategq dkgsleqlie glnsmgesad nmaneieyak lmvisslvll
      121 aaelaaawif pptapavqaa aialtriair iigqtaarai rtmvlslark kffqfmvrhv
      181 aidtvigtgq dlgiqayqvw qgnrkgidwe qvavtavssa vggavagpla hrmgnwlgpq
      241 rlpdgtivrp qrvnpivngl isgstaglag atagyaaslg tqfgidwaqd gwddatknlg
      301 nalnnfdpra itagvfngaa sgankawanq vwsnrrpdlf nqpsfqsrvd avifgpggap
      361 gsgaggpgtp ggtpggqpga ggggqpgagg gnqganqggs ganqggtgan qggnngagqg
      421 gnnnggqsgn qgdggrtspa qgdggrvddg sapppsqgeq rgdsggdtrs geggrdegra
      481 gdsragdaad rgdsdsragd ssragdasrg dsggdagdrg dsragaatgg dgvrgdgglq
      541 aesradsgig ahhgmpgapt nlghaagmdg vgeageagpg vpvappppva agappagapp
      601 anaanaspta ssgdaragag assparggdg rlpvgdtpsg ggpdrandta gpltpddess
      661 epragapdga apvadsrasl pdtnratpnl gdhqpgiqag srpgddlpgl adpdragrap
      721 gdlavyirgd eelggadpar gddapvggdr grgddvlgga drgrgddtsa ggdrgrgdge
      781 lggadrergd dvlgggdrgr ggdepaggdr grgddqpdss dagddaavgr ddrpgtdrda
      841 ersaqdgqgp rdrrpgadrg asparddads sqsegvvpqr rqdpdaddld gsalppamfv
      901 ipppdlsagg vsgrdngpgi nrigsrepap vadssdtpsp trsdatrdga aarrgrcael
      961 alrllseltg sraitppvhp vgpegmsage veaaaggrlr pfdghqdiad qllvlgpgsa
     1021 alvvddytgp tnryrvgaha yalvnengti vvrdpgagrv egfpptlprd vrgiygvvyd
     1081 aqgnplhplg etvpaaggld adrrvgagdg nqapplravp egmyrgsdgn whhtddppnt
     1141 wrdknfqlrd aqrwipdprt sygylhqaqp gpatpyqvtd taiadrlaqa sadrialqae
     1201 rdtlgslvkq hmaefgitdi hdlapkklea eiqrhinria gdrdipeper iaqlirlgel
     1261 raeaeryndl gqdmvatskl lgelgatafv ldpalrpgav qltpfpgafd gantvdiaal
     1321 qpgtggkppk lvvveakgvg stlggsktvs aqqgspeylr rtlaidtnla tllraspeql
     1381 raldsdpagn alidarkall rahrdgtlei eyylahtseh gevtirrfdl nrdgqpvpmd
     1441 iiggveasrl apddsaevlg gdarigdrpd dgdfaddlrd gaddqrdgad dqrdgadhlr
     1501 datddlrdpa ddvhdradgv rdaagerape dptsdsrrlr edlrqqtpdd nrttpvrrpe
     1561 fgpnglpgdr ttpvfdvarf hndgspvtva tvrvhvdtdg tldadgirav tdhmqrtvdd
     1621 llnngsrlrt gdtllvdiva tadadaahir vragaepgtg irsadddpav fvndlrrhlg
     1681 lgplnpnlgt glgfsdadls qlsndiaaan tparfdgmpa trqiapnyld vledpvhqar
     1741 vqdalrdgdr fsigadprsn dygrlindgg pavlgrstnc vdcvlaalas ffgdpqvafp
     1801 rwlsesfaaa pitdlggepd gdrriaewlg rewrqssnvp ipvqfhglhr yidtlgpgsa
     1861 avvanywhat dpdtgqklft ddgrpvydng hatlvvyplg adgpvwwdpq hgrtsdtpps
     1921 llvdnsaaml yidlpadfaa padqsqpkqe hedgstpdqa psgklsggdl pgqavpdpsr
     1981 qarvgvpads algagdrpge lrgelpdgrg drasepaagg dradvrpgdr draadpgpad
     2041 psdpvagdda adprgpqrdr vpgagavdgr sdagtpaddr qadvaqpdgr agdpsgvrag
     2101 egvgdgapep ggdlagagdl ravtdpgsad pydlvrdgag qpdgwlihpa dpaqaevrql
     2161 lartesgraa latlraadvm irfeepgpgp alpdafdgrt mevfvgtrer dlvaqaaalv
     2221 raavltdavv agrvetipar irgldraehi dahrraeada iartaefrde lrragyepda
     2281 apirdavaaa vradlesayl dayadalrqg vspeaareag lahllthpmf dsvdadsgpt
     2341 ktagaqwdae qrprspegmd eyvpsspeaa ravaallrde saatrevmri eadwdrvvdr
     2401 llaaagrsgd elpntrpeil eeftrhpelg etddvgvlae lteqhiraaa drarlvdeia
     2461 dfvrrdltgt dgpraplrvd rdptgvlhvq rgdapvrpde sspprsaesd avvvrgegdp
     2521 ggavvrgege reaavvrvda eldsapgdsl sdraaaqlrd ltfnprnsdl vkwaahtldr
     2581 lgvdvrfste pdarlgrqpn grldlgpiag ydaatntvvl hrsadpaelt relvrgarlt
     2641 elfaadagep lpqltlgrde yvklmldraa ealalsfrad adslgkfdlk rpgvtalera
     2701 fvaayqdavk qaekaywksg vvrsypayhr aafragvrav rtqldtlgpl vdgvrhsdhf
     2761 gaiwdrahgi dpgsapesap rpaksdrdha rladqlaaei eslrmvrelg tyvpvgpaed
     2821 vytraydkay akaeralrrd pdgpppeqaa qragrdalks yldrtgtgka etlldvirsm
     2881 gdldgpgwgf ptkpatdsts ldtpvdaada tadrtgdpel vrrvldleyn eqphpqrltd
     2941 svarypatpe nttprlvvva epgghvdalr elatrypeyt dvlwdlthtl eykravrgpd
     3001 gepvgkpvna ytaegpyrrp hgyeardeil ahylrlrqdn rtalglgewl aqlgqenfkp
     3061 rpknrpggrg ptllregvge rpfrggevdp thpgdvvnrl arreipmpte rrpgapvhys
     3121 lqvfdigamp asinlapdgr ggwrvappld gssgqalnrl fegladsdre rlvarivkvl
     3181 edgsadlydr spprsrfgtf idglpfrsgr dgdsntdrlg dpvpesgdrs esaepapgaq
     3241 edrapvvdew tpltpaevgd rlaselrsil dnpdlevvgf drtgtdpefa reyaraivdl
     3301 atrypqvelr rigiedmaag lvgmtraaed rgtgglvtds mtlntrfasd psllrqwmvd
     3361 gvaagrfhps vlsrpvyaav ahefghaldy agnraarvml ddtlieyyvm nrlgtgtveg
     3421 ydnwlhdqlt gygfdaagql dpgealaeaf vdvvlngrdn vddavgqayd llvgaaertt
     3481 gvdvrpgrdd qgtadrlgdr daesgaadre sdrmahdgiq plrppgeddt pytqdaellg
     3541 ivdddewsdl dpqqvgerlr dhlrevtgnp efdifgfdlp glnavvvrdy arglvdmfar
     3601 fpqvdvrsvg iarlgigvlg etegirdrgt dpwhvtsitl syddacsaha fldatrngvd
     3661 ngqftstmlr rpvyyvavhe fghaldyagn lvardtaese llarakadpd gdfgewlrql
     3721 sgysldadgm lrpgealaea laeylvggag eantpvrily ellvdaardp apadtpapst
     3781 pdrmavdgdp aepdksagrd sdeagaqads aegpitpdsv epppkvtiev egqqvevpvr
     3841 edgpdrwrvv pepdepeaad trsplrrewd avremmpgre pqpkypsgsp vgdsagqaal
     3901 rdgvagipdl vgppppappp appsdvprie appdagqpdp tllriaqqap iwiqnremip
     3961 ilgelsgrmr gtagehlpmr tadgeeyrpw nsdadpdlvr eqivsdhdiq ritpedarqa
     4021 lldafpgadt eqrqriidal lerdlvtaee adrladeppa gtrppepagp ppegeslada
     4081 aqrllgvdlp deslqtlrel idehqyrvvr aaaaieglaa aaqrfheeqt lpfthadwdg
     4141 trppeigpdr agldrgrgpd rldgpdrdad deliddaprp nrfaepdpag ravpfgdwvs
     4201 fldqnpmgrf rneiiaafgh hlglldtvpi gngadplpew gegdelgrdq glrqffehal
     4261 rrdqlrdela twaamrdldv rqltrdmids ivtelrdanv arsdrvaefa eiarqrypdt
     4321 gdgdlvgeai gdqvvripep dgpdrlivvd gargrhqala dalasdpqlv rdlgdgrltv
     4381 dyrvahtdwa grthldpvdt pqvlhrqetv dgrelsvtli regdgpwrpi pvsdpasatd
     4441 pattaprpre eiladlirvm helglgpadv hpdmidqtva dqlldnavra aqiegltdft
     4501 rsandiqtfh evgdarsrla trlgipqiel tgetmgdals dtsqrrglra qqvtdlagya
     4561 rqlreidpaa vdaarnrlae rlvsdsvara ltkakfaera gvslkhaalm ppgrvdvpgq
     4621 grkfavdptg mspaklttvi rdleargqge lvrealteya nalleldpya avargdhsrd
     4681 prvidgrypm hdrdsmtalr diiadavrar gaddfarava daarrsdtgp lpsddptrrp
     4741 tpnrdwariv gvdladadda tfrkvyeayr dgriekhegl speklaaela alrgevrnra
     4801 erihdlarla defyramrea qneasgapnp radqpseepg aaapvdnsgs dpvaaaaggn
     4861 vppggppkap ptpgepsepg pgdsdgagsg rgpgdaglad sqhgpgepgd sgardsarep
     4921 ggaddptrsd apgrlpsawy erqqimqaew earmaaehaa flrgladanp sdrwaglrad
     4981 qaewsarmsa drvqwlrdta ihplsgnegs ppetpestpa papigpdsrr apgepgvggs
     5041 drsardsgsd ddsarrgale glpspwyerq qiiqaewear maaehaaflr gladanpsdr
     5101 waglradqae wsarmsadrv qwlrdtaihp lpedpdtppe ppa
//
LOCUS       WP_258079881             134 aa            linear   BCT 02-MAR-2025
DEFINITION  sterol carrier family protein [Nocardia cyriacigeorgica].
ACCESSION   WP_258079881
VERSION     WP_258079881.1
KEYWORDS    RefSeq.
SOURCE      Nocardia cyriacigeorgica
  ORGANISM  Nocardia cyriacigeorgica
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 134)
  AUTHORS   Shahine,A., Littler,D., Brammananath,R., Chan,P.Y., Crellin,P.K.,
            Coppel,R.L., Rossjohn,J. and Beddoe,T.
  TITLE     A structural and functional investigation of a novel protein from
            Mycobacterium smegmatis implicated in mycobacterial macrophage
            survivability
  JOURNAL   Acta Crystallogr D Biol Crystallogr 70 (Pt 9), 2264-2276 (2014)
   PUBMED   25195741
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036504.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17844.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Nocardia cyriacigeorgica"
                     /db_xref="taxon:135487"
     Protein         1..134
                     /product="sterol carrier family protein"
                     /calculated_mol_wt=14241
     Region          36..125
                     /region_name="SCP_3"
                     /note="Bacterial SCP ortholog; pfam17844"
                     /db_xref="CDD:465530"
ORIGIN      
        1 mvrraavkpe emraavaavr pwlldeaapa paraelgaav rmtaralaes apghsvevrv
       61 ppfvavqcie gprhtrgtpp nvvetdprtw lllatglvdf aaaredgrlt asgnradevs
      121 rwlpilrvnv dpig
//
LOCUS       WP_258079893             830 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Nocardia cyriacigeorgica].
ACCESSION   WP_258079893
VERSION     WP_258079893.1
KEYWORDS    RefSeq.
SOURCE      Nocardia cyriacigeorgica
  ORGANISM  Nocardia cyriacigeorgica
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 830)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 830)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019348.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07728.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Nocardia cyriacigeorgica"
                     /db_xref="taxon:135487"
     Protein         1..830
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=85757
     Region          32..161
                     /region_name="AAA_5"
                     /note="AAA domain (dynein-related subfamily); pfam07728"
                     /db_xref="CDD:400191"
     Site            37..44
                     /site_type="other"
                     /note="Walker A motif"
                     /db_xref="CDD:99707"
     Site            order(38..45,100,144)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:99707"
     Site            96..101
                     /site_type="other"
                     /note="Walker B motif"
                     /db_xref="CDD:99707"
     Site            160
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:99707"
     Region          590..794
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
ORIGIN      
        1 marpngqdyh lrqlagradv evlqtmraae vpvllygppg tgktslieaa ygdlltvqgd
       61 gdttvadfvg eytqtpdgrf vfvdgplvra mkegrvlfid datlisptvl aavypamdgr
      121 kelvvkatga vvkaepgffv vaghnpgvhg ailsdalssr fafqvrvvsd ldlaaqlgve
      181 rravkvarel aarqakgevg wapqlrella frkiaaatdp dtamanllga apeedrevva
      241 avmktvcgta sapaaagaga apaaapatpa ptsvpvtggw atlsaamtae vppiadrddl
      301 tvsiapgaaf ghpavfvpal raieldgsrl kidpaaacpa rnsdrnhypa vwgalvheca
      361 hakhsvwrap llahpevvka adlleesrie aaqirrrpdd rhwlrasate ivigdnggas
      421 aaahlprtty aaahnaalvl gridagvlte secaplvrei esilgtdtla alraiwreah
      481 tvadtdtaam lelgrrwfdi vgpephttpv ptsllgaaie ataaaiarev aanpvpadpa
      541 esaaaareaa aataeqaqlm aehvfgdget pghsrtvart rtplsteqta arvlaraldt
      601 aaareratvk ttsvvppgrv rmrgvlarqa qlaagaipta epftrtarkt spypplqvgi
      661 acdvsssmsa faapvssaaw iiaraaelaa mpattatvtf gakvtpityp gtapaqvaef
      721 gcpdkyhala aatvaldgal glsrpgatrl lviisdgiyr pherasaqrr ldavraagca
      781 vlwlapesgk rpgrpgaptp lngatvhvvs dpaatataia raitaavraa
//
LOCUS       WP_258079457              66 aa            linear   BCT 02-MAR-2025
DEFINITION  polysaccharide lyase family protein, partial [Xanthomonas
            arboricola].
ACCESSION   WP_258079457
VERSION     WP_258079457.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 66)
  AUTHORS   McDonough,M.A., Kadirvelraj,R., Harris,P., Poulsen,J.C. and
            Larsen,S.
  TITLE     Rhamnogalacturonan lyase reveals a unique three-domain modular
            structure for polysaccharide lyase family 4
  JOURNAL   FEBS Lett 565 (1-3), 188-194 (2004)
   PUBMED   15135077
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026034.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14683.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         <1..>66
                     /product="polysaccharide lyase family protein"
     Region          <25..65
                     /region_name="RGL4_C"
                     /note="C-terminal domain of rhamnogalacturonan lyase, a
                     family 4 polysaccharide lyase; cl15687"
                     /db_xref="CDD:472827"
     Site            order(31,33,37)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:199905"
ORIGIN      
        1 adldpvaarl qrrcrdvhli qrvvaaptqp rtrgitrgtw rgnntlyevd ipasalqsgs
       61 nrieig
//
LOCUS       WP_258079946             541 aa            linear   BCT 02-MAR-2025
DEFINITION  adhesive domain-containing protein, partial [Enterococcus
            faecalis].
ACCESSION   WP_258079946
VERSION     WP_258079946.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 541)
  AUTHORS   Creti,R., Fabretti,F., Koch,S., Huebner,J., Garsin,D.A.,
            Baldassarri,L., Montanaro,L. and Arciola,C.R.
  TITLE     Surface protein EF3314 contributes to virulence properties of
            Enterococcus faecalis
  JOURNAL   Int J Artif Organs 32 (9), 611-620 (2009)
   PUBMED   19856273
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042848.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20609.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Enterococcus faecalis"
                     /db_xref="taxon:1351"
     Protein         1..>541
                     /product="adhesive domain-containing protein"
     Region          70..361
                     /region_name="pAdhesive_17"
                     /note="Putative adhesive domain (group 17); pfam20609"
                     /db_xref="CDD:466758"
     Region          <384..>538
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 milvfivyfk ekrddqmkkk ivedfnrksq hkkwtkrkml nlaissgllf tslaipvsia
       61 vtsgtisasa avldiellsn vtsnndsgts tsnrwtaanq nqpvnftvsg galadasavf
      121 sgqkqavlvv ppelrgnvaa agsaaintnv tidlskvtfl tavlnaandl tnvitqitsg
      181 algnltgvdi dltevnrqle lvnnienlga asftapetla adgsyisapi sdglglvlaq
      241 nvsnilqdln aavqaleakg tsipsnlvat ainaallpvk gtvnvavsga lpllavggsg
      301 vnelvdasll gattvtlptt vstpqnlsnn ldarfvgtvv qtdlldvnll atadgvsniy
      361 faagttsevt aptvtgvtgn stagyevkgt adanatveir naggavigtg tadgtgaftv
      421 tipagevgan etltavakna sgtestpttf qtpadeatvt aptitgvtgn stagyevkgt
      481 adanatveir naggtvigtg tadgtgaftv tipageagan etltavakna sgtestpttf
      541 q
//
LOCUS       WP_258080100             513 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Enterococcus mundtii].
ACCESSION   WP_258080100
VERSION     WP_258080100.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus mundtii
  ORGANISM  Enterococcus mundtii
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 513)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Enterococcus mundtii"
                     /db_xref="taxon:53346"
     Protein         1..513
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=58387
     Region          94..325
                     /region_name="CpdA"
                     /note="3',5'-cyclic AMP phosphodiesterase CpdA [Signal
                     transduction mechanisms]; COG1409"
                     /db_xref="CDD:441019"
     Region          369..>473
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cl49609"
                     /db_xref="CDD:483949"
     Site            order(382..384,391,393,400..401)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(426,432,441,443,450..451)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
ORIGIN      
        1 mkfekrtkil inkmiksitl sasilvgtim vgttafadid yafvvtsdpq fpwtaktddg
       61 iyqsdsdlra esaalilnqy dsindystsi gnkvihtyvn gdvtaygqgs qwsrmdqlfs
      121 rlkmpysygl gnhdiennfe dtflnqawri tfnrmhtyrp hnwiskdtwk edyffeskhv
      181 gslnysqkig dfrmitanny ptmhlscsdg tgptywltpg mdyierqlee arsanqpail
      241 yihkpndwkl gsdpqgrfka mvekyydngt lravfaghyh ktigkvsypq yfgkvpvyss
      301 gsasqktylt aevdhsknem kiyrvignvw ekkqlidtia inskgltavn ddrdyqqqke
      361 lanrvgnsyh iinslnnsra lddsassddv iyfnehrntn qqwrfvfyea nnsfvihnra
      421 nnfsmyesds kwngfsivrt gvlnasdkra qwrvvsagna ygtiplykfr nvrsgklltl
      481 nsysgkltda aigatlltap dfgvtvlqqf mld
//
LOCUS       WP_258080110             226 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease subunit S, partial [Enterococcus faecium].
ACCESSION   WP_258080110
VERSION     WP_258080110.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 226)
  AUTHORS   Janscak,P. and Bickle,T.A.
  TITLE     The DNA recognition subunit of the type IB restriction-modification
            enzyme EcoAI tolerates circular permutions of its polypeptide chain
  JOURNAL   J Mol Biol 284 (4), 937-948 (1998)
   PUBMED   9837717
REFERENCE   2  (residues 1 to 226)
  AUTHORS   Bickle,T.A. and Kruger,D.H.
  TITLE     Biology of DNA restriction
  JOURNAL   Microbiol Rev 57 (2), 434-450 (1993)
   PUBMED   8336674
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01420.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..>226
                     /product="restriction endonuclease subunit S"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
     Region          18..211
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
     Site            order(130,133..134,136..137,165,167,173,177,180..181,206,
                     208..209)
                     /site_type="other"
                     /note="TRD-CR/TRD-CR interface [polypeptide binding]"
                     /db_xref="CDD:341135"
ORIGIN      
        1 msndtrpeir fpgftedweq rklselatmn arigwqnlrt sefldkgdym litgtdfkdg
       61 aidysnihyv ererfeqdkk iqisngsili tkdgtlgkva yvegltmpat lnagvfnvrv
      121 kenlaidsry lfhylkapfl lkfadqrstg gtikhlnqnv lvefpiplps leeqhkvagl
      181 lsnfdntial hqrkldllke tkkgflqkmf pkngakvpei rfpgft
//
LOCUS       WP_258080137             138 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_258080137
VERSION     WP_258080137.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 138)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>138
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
     Region          9..>137
                     /region_name="PRK09841"
                     /note="tyrosine-protein kinase"
                     /db_xref="CDD:182106"
ORIGIN      
        1 mslvtnksss kdedeldlgr ligeiidhrk livsitafft llalvyvvfs tpiyqadali
       61 qveqkqgnai lnnlsqmlpd sqpqsapeia liqsrmilgk tvddlnlqti ikksyfpifg
      121 rgfarllgen egslsisr
//
LOCUS       WP_258080155             105 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Enterococcus faecium].
ACCESSION   WP_258080155
VERSION     WP_258080155.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 105)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..>105
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          <1..>105
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 pdylyeetki qtkvadllfq sigktpkqeg wkilfkqqnk eekedvqtlp lviigehaev
       61 dvksaeketq ppkaftegtl ltamktankt vddeeaikil qeveg
//
LOCUS       WP_258080171            1079 aa            linear   BCT 02-MAR-2025
DEFINITION  SpaA isopeptide-forming pilin-related protein [Enterococcus
            faecium].
ACCESSION   WP_258080171
VERSION     WP_258080171.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 1079)
  AUTHORS   Kang,H.J., Paterson,N.G., Gaspar,A.H., Ton-That,H. and Baker,E.N.
  TITLE     The Corynebacterium diphtheriae shaft pilin SpaA is built of tandem
            Ig-like modules with stabilizing isopeptide and disulfide bonds
  JOURNAL   Proc Natl Acad Sci U S A 106 (40), 16967-16971 (2009)
   PUBMED   19805181
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2009 Oct 27;106(43):18427]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037639.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17802.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..1079
                     /product="SpaA isopeptide-forming pilin-related protein"
                     /calculated_mol_wt=119768
     Region          <25..121
                     /region_name="rne"
                     /note="ribonuclease E; Reviewed; PRK10811"
                     /db_xref="CDD:236766"
     Region          298..991
                     /region_name="ClfA"
                     /note="Clumping factor A-related surface protein, MSCRAMM
                     (microbial surface components recognizing adhesive matrix
                     molecules) family, DEv-IgG fold [Cell
                     wall/membrane/envelope biogenesis]; COG4932"
                     /db_xref="CDD:443959"
     Region          1044..1076
                     /region_name="LPXTG_anchor"
                     /note="LPXTG-motif cell wall anchor domain; TIGR01167"
                     /db_xref="CDD:273478"
ORIGIN      
        1 mkfkgfkkvk kkmaslmlfl slsgaisqpi gvlaeteafn qtessevvkt epqnerietp
       61 etsdstqeet pvveesqkve eekvvsseqi qeqkvtepte vtqeqvlvpa paktqeqlte
      121 eikalfaqng yewledgnvr sttgtsyrsd lydvlrqaea lkaqnqaqtr anlfggdsfl
      181 pkgtgvvyvd snygdanfrw kqtgipqetg yyakrdasgn plwcvepgap ldwganpgft
      241 tsnvtddkyi kaslavywgw ekqksivnsf yteklvqeit tgkrvesmsd lsgqgrvsls
      301 gyevfrketl akvdtffkrp sfngksytvq agetltltdt nkvlsyyele ennanvstsi
      361 sgntlkitpk tdskdsgslk ffykidpsyk gatilyqapw lqdvikarig dpaestvnik
      421 vqkegefqik kvdketgkpv pgtkfkleys nipagmtapk vtevttdeng lspkikaphg
      481 thvkateisv pdpyvlgstv gdsdvvegdv vsnelivltq rnqqakgqii ieksgvesgk
      541 dmwnanytla gnvfevrkdt vngevvktit tddkghaetg kdlplgtyav vektasngfa
      601 ntfkpvivki eyanqttavi vkntegtnqe vtgstvltke daetgsetqg qatfngaqyg
      661 lfhedgtpvk wsetfkpeyv egkklegdei vfemtdelpk asvkhlalgk yfwretkape
      721 gyqidntkre feitykdqnt kviatesvsk envvkfsldg fkyvesksgg tktgyngief
      781 kltpingtkg eeistetvtd engydgyfaf egvpygdydl eevkapegyq iiqpltitsd
      841 fdaekreytf tvtekdqkep lkvltvseee inngsnviql sklfitnnlv kiptirtlat
      901 vdgektftpa kdtpmhddif lgdlnkgdky tnkiklwriq nenyekaqvv fetdkdfvaq
      961 aenekqvidt lvdtskdden tsyvwteely detgkkvaeh ndltnkdqtv tpkiekkevv
     1021 pttsekqtpt stpkqpqakq tqnlpktgef vnpalvvlgm vlfvsalivl ayrsmkeen
//
LOCUS       WP_258080202             433 aa            linear   BCT 02-MAR-2025
DEFINITION  T7SS effector LXG polymorphic toxin [Enterococcus faecium].
ACCESSION   WP_258080202
VERSION     WP_258080202.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 433)
  AUTHORS   Zhang,D., Iyer,L.M. and Aravind,L.
  TITLE     A novel immunity system for bacterial nucleic acid degrading toxins
            and its recruitment in various eukaryotic and DNA viral systems
  JOURNAL   Nucleic Acids Res 39 (11), 4532-4552 (2011)
   PUBMED   21306995
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016617.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04740.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..433
                     /product="T7SS effector LXG polymorphic toxin"
                     /calculated_mol_wt=46523
     Region          9..202
                     /region_name="LXG"
                     /note="LXG domain of WXG superfamily; pfam04740"
                     /db_xref="CDD:428100"
     Region          346..>380
                     /region_name="Gly-zipper_Omp"
                     /note="Glycine zipper; pfam13488"
                     /db_xref="CDD:463894"
ORIGIN      
        1 mgliysssda snvintlntn lgiansivdq lnagsqrlva aidghtmsga aytagkglfs
       61 eliiptinrv ttaitnvqnd ltkfsaansy isdegylden nlreqltilk sskaslenaa
      121 hmvgtlanvp ipaiaellrd qqreflrrae syqkdinrvk kkiqkltefd aktkglfqss
      181 lddfelamqa vlvlnettvn pdgsyllpeg tdksyffkvk kdndmkktlk kltekldysh
      241 tvgevtldva keyaksskvk airlgsrtia nysfsrtssy aktlesvsdd lidsieiisn
      301 nklwrsagvi gtvagvvfdy ddqmnkyndv eraakntfvh aaidaggsvv gayiggiigs
      361 aipipgigtv agaltgaylg kvgeniydwi etgqarqdfd nvsntiisgm nslkskagkv
      421 faglgkslgs afg
//
LOCUS       WP_258080207             413 aa            linear   BCT 02-MAR-2025
DEFINITION  T7SS effector LXG polymorphic toxin [Enterococcus faecium].
ACCESSION   WP_258080207
VERSION     WP_258080207.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 413)
  AUTHORS   Zhang,D., Iyer,L.M. and Aravind,L.
  TITLE     A novel immunity system for bacterial nucleic acid degrading toxins
            and its recruitment in various eukaryotic and DNA viral systems
  JOURNAL   Nucleic Acids Res 39 (11), 4532-4552 (2011)
   PUBMED   21306995
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016617.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04740.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..413
                     /product="T7SS effector LXG polymorphic toxin"
                     /calculated_mol_wt=44230
     Region          9..200
                     /region_name="LXG"
                     /note="LXG domain of WXG superfamily; pfam04740"
                     /db_xref="CDD:428100"
     Region          360..395
                     /region_name="Gly-zipper_Omp"
                     /note="Glycine zipper; pfam13488"
                     /db_xref="CDD:463894"
ORIGIN      
        1 mgliysssda snvintlntn lgiansivdq lnagsqrlva aidghtlsga aytagkglfs
       61 elvlptiqrv staitnvqnd ltkfsaansy isdegylded nlreqltilq hsksslenaa
      121 hvagtlanip vpaiaellrd qqrnflkrae syqkdinrvk kkiqkltefd aktkrlfqss
      181 lddfqlamqa vmvlnettvn sdgsyslpkg vdktwftiiq kkqtvvntln kvnnvivsgs
      241 yaatanvvsk easaslkkwr ngtwhnskvk stktglktwk qvngdvnrfk svknakkvde
      301 ilngtgkikg gikgigylga agaifdgttt flerkvkygt tsavidgtah aassvssiyv
      361 gatigslipi pvvgtlvgaa agfvvgnvln svwdefahsk dndffswgti fgn
//
LOCUS       WP_258080214              67 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-binding domain-containing protein, partial [Enterococcus
            faecium].
ACCESSION   WP_258080214
VERSION     WP_258080214.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015411.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03446.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..>67
                     /product="NAD(P)-binding domain-containing protein"
                     /GO_function="GO:0050661 - NADP binding [Evidence IEA]"
     Region          17..>66
                     /region_name="WecC"
                     /note="UDP-N-acetyl-D-mannosaminuronate dehydrogenase
                     [Cell wall/membrane/envelope biogenesis]; COG0677"
                     /db_xref="CDD:440441"
ORIGIN      
        1 mnleniknki enrtlnigii glgyvglpla mefldknykv fgydiseeki nnikhgridy
       61 tdvdndk
//
LOCUS       WP_258080230            1872 aa            linear   BCT 02-MAR-2025
DEFINITION  TIM-barrel domain-containing protein, partial [Enterococcus
            faecalis].
ACCESSION   WP_258080230
VERSION     WP_258080230.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 1872)
  AUTHORS   Henrissat,B.
  TITLE     Glycosidase families
  JOURNAL   Biochem Soc Trans 26 (2), 153-156 (1998)
   PUBMED   9649738
REFERENCE   2  (residues 1 to 1872)
  AUTHORS   Henrissat,B.
  TITLE     A classification of glycosyl hydrolases based on amino acid
            sequence similarities
  JOURNAL   Biochem J 280 (Pt 2) (Pt 2), 309-316 (1991)
   PUBMED   1747104
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013239.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01055.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..1872
                     /organism="Enterococcus faecalis"
                     /db_xref="taxon:1351"
     Protein         <1..1872
                     /product="TIM-barrel domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          77..179
                     /region_name="AGL_N"
                     /note="Alpha-glucosidase, N-terminal; pfam16338"
                     /db_xref="CDD:465098"
     Region          188..298
                     /region_name="GH31_N"
                     /note="N-terminal domain of glycosyl hydrolase family 31
                     (GH31); cd14752"
                     /db_xref="CDD:270212"
     Site            225
                     /site_type="active"
                     /db_xref="CDD:270212"
     Region          296..686
                     /region_name="GH31_CPE1046"
                     /note="Clostridium CPE1046-like; cd06596"
                     /db_xref="CDD:269882"
     Site            order(389,461,498,511,514,548,574)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:269882"
     Region          731..804
                     /region_name="DUF5110"
                     /note="Domain of unknown function (DUF5110); pfam17137"
                     /db_xref="CDD:465360"
     Region          905..984
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(973..974,976..977)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          995..1121
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
     Region          1140..1197
                     /region_name="Dockerin_II"
                     /note="Type II dockerin repeat domain; cd14254"
                     /db_xref="CDD:271213"
     Site            order(1145,1147,1149..1151,1153..1154,1156..1158,1160,
                     1189,1193,1196..1197)
                     /site_type="other"
                     /note="cohesin binding interface 1 [polypeptide binding]"
                     /db_xref="CDD:271213"
     Site            order(1150,1157,1160,1181,1183,1185..1187,1189..1190,
                     1193..1194,1196)
                     /site_type="other"
                     /note="cohesin binding interface 2 [polypeptide binding]"
                     /db_xref="CDD:271213"
     Region          1210..1399
                     /region_name="Type_III_cohesin_like"
                     /note="Cohesin domain, interaction partner of dockerin;
                     cd08759"
                     /db_xref="CDD:260086"
     Site            order(1245,1249,1276..1279,1281..1283,1292,1294,
                     1296..1298,1336..1338,1360,1365)
                     /site_type="other"
                     /note="dockerin binding interface [polypeptide binding]"
                     /db_xref="CDD:260086"
     Region          1282..>1785
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
ORIGIN      
        1 nfkeekmnke yqgkkiygkk hwltfllvss svlafhslvm mdsqvvdaqe qtakedvads
       61 atsvgaivsi ekaeknfvit yasgkkaqis ilndhlfryh ldptgkfeey ptpndpkhva
      121 kitaktmady gtqafeqtnv tdsgnqftle nnglkiifek esalmkvldk kkdqvileet
      181 aplsfkndka tqtlkqssqe nyfgggtqng rfthkgtaiq ivntnnwvdg gvtspnpfyw
      241 stagygvvrn twkpgnydfg shdpqttttt hegtdfdafy ffndssagil kdyyeltgkp
      301 almpeygfye ahlnaynrdy wvkvaegtag avkfedgnfy keyqpgdlgn lngtleslng
      361 ekenyqfsar avidrykknd mplgwflpnd gygagygqtd sldgdvqnlk eftdyaqang
      421 vevglwtqsn lhpadpknpk kgerdiakev svagvkalkt dvawvgygys fglngvedaa
      481 nvfvketdga vrpmivsldg wagtqrhagi wtgdqtggqw eyirfhipty igtslsgqpn
      541 vgsdmdgifg gknkevnird fqwktftpvq lnmdgwgsnp ktpfafdqea tdlnraylkl
      601 ksmmmpynys iakesvdglp mvramalefp negtaytkds qyqymwgpnl lvapiyngnq
      661 deagnsirdg iylpdekqvw vdlftgekyq ggrvlngvkt plwkvpvfvk dgsiipmtnp
      721 nnnpkeiqrd qrsfliypng atsfnmyedd gistsyeagq sattkinsqg pksnekgdlt
      781 vtieptkgsy kgfvderstt ldllaseape svtamvggte vtlkeaanke eflagtnlyy
      841 fdkefqvnqy lseasgekln qsalsvklak qsvtakdvqi tvngfinkgt vdggnttvdd
      901 qltipanvai neekttpssl tlqwdqvtea tsyeverdgt vfgniqtnta tfdgfsflse
      961 htfrvravgk ngvsewsepi kgktqddpyk etinqvkats nlpeqpgael kkltdkdlst
     1021 gwhtnwstgi anpsdgnflt lkfdlgaeyq mdkieylprd nagngnilql qyrtskdgan
     1081 wtefsepinw kqdaltktie tkdqayrfve mkvlksvgnf gsgremlfyk qpgtegilhg
     1141 ditndgtide ndamsyrnyt glesvdsdfn gyvekgdlnk ngvidaydis yvlrqldggi
     1201 eipdveeiag glslavvnen gkdtylpgdt ltftlkgqdl kninalstkm sfdsskfelv
     1261 gqpattnntk qmenyskyrk hsndvenlyl vlsnqgnkql lngsmdlvtf kvkvkettrv
     1321 krattveqsl qfdmsqgllv gqgfqqatls dfsvtvkpte lvdkellqal itlnqarvek
     1381 eytpetwaif kpildeavav laneqatqtd vtaavenlek aveqlekmpd vankadleka
     1441 iqegltkkps dgqefteetk kvleeslaaa qkvfaqekvt qeeidqatkt lreaiaqlke
     1501 qpvavdketl kekiaqargr kpeegyqftk etekqlqeai qaaeaivake tatkeevsaa
     1561 lnaletamaq lkevplvnkd qlqevvkraq qvtpseghqf tasslqdlqk allaakntle
     1621 npaanqkmid eavaeltsai eglqeealvt dkkaleamia kakaikpsag keftseskar
     1681 lteaidqaeg iladknarqe qidtaeknvk taldsleeqv lqtdktklke llqkaetlkp
     1741 kagkqftkas qealaeaikq akalvedpna tqeavdkcls ilaqaieama eepissnstg
     1801 nnrnhgtvsg tgsvtspgkg taaggtttkt ttsgtlpkan evvspiwsis gfllivsigl
     1861 gklffknkkd qn
//
LOCUS       WP_258080241             212 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6056 family protein, partial [Enterococcus faecalis].
ACCESSION   WP_258080241
VERSION     WP_258080241.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039639.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19528.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Enterococcus faecalis"
                     /db_xref="taxon:1351"
     Protein         <1..>212
                     /product="DUF6056 family protein"
     Region          1..>212
                     /region_name="DUF6056"
                     /note="Family of unknown function (DUF6056); pfam19528"
                     /db_xref="CDD:437360"
ORIGIN      
        1 yisfvilnfl tplladdfny ifktgniftv fhdeylhyls tngrsvahli vrtlllmpkf
       61 ifnivnpivf livsgiiykl tnfskqkfnt irllfivmli vlfvprfget ilwetgsiny
      121 lwtfgimltf isiyhwkiik nvspvmkyas ffmfifglia gwcnentsgg lilltisyif
      181 iewkinnkkv lnwmkfgllg efigflimls sp
//
LOCUS       WP_258080313             146 aa            linear   BCT 02-MAR-2025
DEFINITION  DALR anticodon-binding domain-containing protein, partial
            [Enterococcus faecium].
ACCESSION   WP_258080313
VERSION     WP_258080313.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 146)
  AUTHORS   Wolf,Y.I., Aravind,L., Grishin,N.V. and Koonin,E.V.
  TITLE     Evolution of aminoacyl-tRNA synthetases--analysis of unique domain
            architectures and phylogenetic trees reveals a complex history of
            horizontal gene transfer events
  JOURNAL   Genome Res 9 (8), 689-710 (1999)
   PUBMED   10447505
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017555.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05746.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..146
                     /product="DALR anticodon-binding domain-containing
                     protein"
                     /GO_function="GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
     Region          <1..143
                     /region_name="GlyS"
                     /note="Glycyl-tRNA synthetase, beta subunit [Translation,
                     ribosomal structure and biogenesis]; COG0751"
                     /db_xref="CDD:440514"
ORIGIN      
        1 rhdvidavln aeqkdltkvf aaaqlfkqhl adedfkpsme altrvvnlsk kaqlekqsev
       61 dpelfeneae kelhkaveam ktsfadqtin enydqlvslr plienyfdqt mvmaeepavr
      121 knrltqlsqi aamalslasl dqiitk
//
LOCUS       WP_258080314             176 aa            linear   BCT 02-MAR-2025
DEFINITION  type I restriction endonuclease, partial [Enterococcus faecium].
ACCESSION   WP_258080314
VERSION     WP_258080314.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 176)
  AUTHORS   Piekarowicz,A., Klyz,A., Kwiatek,A. and Stein,D.C.
  TITLE     Analysis of type I restriction modification systems in the
            Neisseriaceae: genetic organization and properties of the gene
            products
  JOURNAL   Mol Microbiol 41 (5), 1199-1210 (2001)
   PUBMED   11555298
REFERENCE   2  (residues 1 to 176)
  AUTHORS   Makovets,S., Doronina,V.A. and Murray,N.E.
  TITLE     Regulation of endonuclease activity by proteolysis prevents
            breakage of unmodified bacterial chromosomes by type I restriction
            enzymes
  JOURNAL   Proc Natl Acad Sci U S A 96 (17), 9757-9762 (1999)
   PUBMED   10449767
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016220.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04313.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..>176
                     /product="type I restriction endonuclease"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
     Region          7..>176
                     /region_name="HsdR_N"
                     /note="N-terminal domain of HsdR motor subunit of type I
                     restriction-modification enzyme EcoR124I and similar
                     systems; cd22332"
                     /db_xref="CDD:411736"
ORIGIN      
        1 mkishreeae veeqlirvlg eghnqwtyrp dlkseedlwv nlrqkiisnn qaelndsplt
       61 dkefetikte lllrtktpfd aakwlkgeng maritiered sqlgsvslil ysnqdigggi
      121 styevvhqia krgsnieard rrfdvtllin glpivqielk qvtakdgfyq afnqik
//
LOCUS       WP_258080337             272 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Enterococcus faecium].
ACCESSION   WP_258080337
VERSION     WP_258080337.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 272)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 272)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 272)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 272)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..272
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          87..271
                     /region_name="ABCF_EF-3"
                     /note="ATP-binding cassette domain of elongation factor 3,
                     subfamily F; cd03221"
                     /db_xref="CDD:213188"
ORIGIN      
        1 taaekaewsr sregdktkkk vgfidtesrr vnkgavgada artmkrskai vnrmetqise
       61 kekllkdiey idaltmnsqv shhkrllsve nlqlgyenll fepvhftiep hqrmaisgpn
      121 gagkssiihy llgtfngkvv geksqpkhlt isyvrqnyed nrgtlaefak knrvdyqafl
      181 nnlrklgmer dvfhnkieqm smgqrkkvel akslsqpael yiwdeplnyl dvfnqeqleq
      241 lilnvkpaml lvehdqtfld kvsteiisle ki
//
LOCUS       WP_258080434             465 aa            linear   BCT 02-MAR-2025
DEFINITION  histidine-type phosphatase [Xanthomonas arboricola].
ACCESSION   WP_258080434
VERSION     WP_258080434.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 465)
  AUTHORS   Rigden,D.J.
  TITLE     The histidine phosphatase superfamily: structure and function
  JOURNAL   Biochem J 409 (2), 333-348 (2008)
   PUBMED   18092946
REFERENCE   2  (residues 1 to 465)
  AUTHORS   Kostrewa,D., Wyss,M., D'Arcy,A. and van Loon,A.P.
  TITLE     Crystal structure of Aspergillus niger pH 2.5 acid phosphatase at
            2. 4 A resolution
  JOURNAL   J Mol Biol 288 (5), 965-974 (1999)
   PUBMED   10329192
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012548.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00328.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..465
                     /product="histidine-type phosphatase"
                     /calculated_mol_wt=48962
     Region          72..465
                     /region_name="HP"
                     /note="Histidine phosphatase domain found in a
                     functionally diverse set of proteins, mostly phosphatases;
                     contains a His residue which is phosphorylated during the
                     reaction; cl11399"
                     /db_xref="CDD:472174"
     Site            order(95..96,99,171,361..362)
                     /site_type="active"
                     /note="catalytic core [active]"
                     /db_xref="CDD:132717"
ORIGIN      
        1 mgfrqakktg qggeqtpagd dgndamgias lpscrivapl hararqratt alrprwrmpa
       61 lalgalllig ctprppgppa saqtaqlerv vivfrhgvra plqgeaaaah yadapwpqws
      121 tpaslltphg rigvqlsgdy lrqwlaqqgv lsrsgcpaag svsvwtntdq rtidsgalla
      181 ealapgcgiv aghrqagsnd plfrpieaga vpfdgtaava aiekqtggpa allrghaael
      241 qamqqilgct rtpcdfaqmp stlapsangr glalggpidl tsgtgevlll qyaeglpllq
      301 vgwgratper laqvsrlhal lfdiyarphy masrsgapla revlqrfgdm qapkvsvfvg
      361 sdthiaalsg llgvhfhlpg ygaddpppgg alllelwrep ngqqvvraqy laqsldqlrt
      421 laplnlehpp lqqklalgvc taeqrmacpl kafaqaleqq lqrep
//
LOCUS       WP_258080580             649 aa            linear   BCT 02-MAR-2025
DEFINITION  SpoIIE family protein phosphatase [Xanthomonas arboricola].
ACCESSION   WP_258080580
VERSION     WP_258080580.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 649)
  AUTHORS   Barak,I., Behari,J., Olmedo,G., Guzman,P., Brown,D.P., Castro,E.,
            Walker,D., Westpheling,J. and Youngman,P.
  TITLE     Structure and function of the Bacillus SpoIIE protein and its
            localization to sites of sporulation septum assembly
  JOURNAL   Mol Microbiol 19 (5), 1047-1060 (1996)
   PUBMED   8830262
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018884.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07228.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..649
                     /product="SpoIIE family protein phosphatase"
                     /GO_function="GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=70581
     Region          43..192
                     /region_name="PDC1_MCP_like"
                     /note="first PDC (PhoQ/DcuS/CitA) domain of
                     methyl-accepting chemotaxis proteins and similar domains;
                     cd12913"
                     /db_xref="CDD:350338"
     Region          195..629
                     /region_name="RsbU"
                     /note="Phosphoserine phosphatase RsbU, regulator of sigma
                     subunit [Signal transduction mechanisms, Transcription];
                     COG2208"
                     /db_xref="CDD:441810"
ORIGIN      
        1 mrvllaatav lvvllallgt vfylgarael veaartevdg lteqtarsla amldsvqvsg
       61 rtlaasssav glqpfnlral llatlsgdpd igaarliiep rtqkardtgf vwyvhrdgtr
      121 vleksvqdlg ydyrampwyl rtqregraww sepylnangg nalytsynlp lrrpgdavda
      181 apvgmvsvdl plqhlreiid qlprdigiqp mllspegmlv fspdpalnlr ytleryvahs
      241 rpdlaplqha vaagqpisfa htapdgerfl thsaavgrsg wtfvlsaseg yvlaglnwla
      301 awvalaallg avvwwwlmgr itrkltrpie eltdtaehfr rgefayplrh ierrdevgvm
      361 arafdsarda irdhiaqige mtaarermhs elqiareiqq amlpsgrtfd rasshletca
      421 wlepakavgg dfyhfvetep gllwfvvgdv sdkgvpaalf maravsvlei aarrhtrpds
      481 iliaastrla enndtcmfat vlcgvinvvs gdywlasagh eppvlididg sarplpldtg
      541 aplgiepqva ypvlqgrmsa gqtllgytdg vteamdeqga syglerllga lrprrsaaaq
      601 ckavianiah ftgqadpydd itllairlrq ehagrvadag rdapgkatt
//
LOCUS       WP_258080614            1614 aa            linear   BCT 02-MAR-2025
DEFINITION  putative Ig domain-containing protein, partial [Xanthomonas
            arboricola].
ACCESSION   WP_258080614
VERSION     WP_258080614.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 1614)
  AUTHORS   Bentley,S.D., Maiwald,M., Murphy,L.D., Pallen,M.J., Yeats,C.A.,
            Dover,L.G., Norbertczak,H.T., Besra,G.S., Quail,M.A., Harris,D.E.,
            von Herbay,A., Goble,A., Rutter,S., Squares,R., Squares,S.,
            Barrell,B.G., Parkhill,J. and Relman,D.A.
  TITLE     Sequencing and analysis of the genome of the Whipple's disease
            bacterium Tropheryma whipplei
  JOURNAL   Lancet 361 (9358), 637-644 (2003)
   PUBMED   12606174
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017183.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05345.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..>1614
                     /product="putative Ig domain-containing protein"
     Region          25..1339
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          1448..>1612
                     /region_name="Autotransporter"
                     /note="Autotransporter beta-domain; pfam03797"
                     /db_xref="CDD:461054"
ORIGIN      
        1 mfvlfammll apgwamaqas tycptlnatv vqggsvqidv ttcdgtgadd igigwngvqp
       61 phgtlvvpnp sgaqgtqivt ythngdsats dtfpledgrg dtitvnitit pnqptlsinn
      121 vsvnegnagt tnatftvsls qpagtggvsf diatadgtat agvdyvassl tgqtipagss
      181 satftvlvng dtlsepnetf fvnvsnvtga svgdgqgqgt ivnddalpal siddvsvneg
      241 nsgtttatft vslsaasgqt vsvnyitadg tatagsdyaa rsgtltfapg vtaqgvaitv
      301 ngdtavepne tfsvglsgas nasiaratgt gtivnddvvv vvgpaslpaa tagsaysqtl
      361 sasggtapht faitagalpa glslsaggvl sgtptasggf nftatatdsg gsptsgaray
      421 tltvavattt fpatslpagt agqayssaln patggvapyt yavtagalpa gitldgssga
      481 ltgtpgsvgs fsfsvtatds ttgtpsqatr sytltiaapp ivvapsalps atrgtaysqt
      541 lsasggtapy tyalasgtlp agitlasngt lsgtatvegs fnvtvtatda gsftgnqayt
      601 ltvagpnlvl pastlpagta gqaysaaitp atggtapyty altggvlpag vvvdaatgal
      661 sgtptvagtf nftltvsdst pspaaqasrs ytltiaapvv viapttlssa trgtaysqtl
      721 sasggtapyt yavsagslpa gitlasngtl sgtatvegsf nvtvtatdan tftatqtyal
      781 tvagpnlalp astlpagtag qaysaaitpa tggtapysya ltggvlpagv vvdaatggls
      841 gtptvagtfn ftltvsdstp spaaqasrny tltiaapvvv iapttlpaat rgtaysqtls
      901 asggtapyty alasgtlpag itlasngtls gtatvegsfn vtvtatdant ftatqayalt
      961 vagpnlalpa stlpagtagq aysaaitpat ggtapyryal tagalpngvi vdaatgrlsg
     1021 tptlsgtfnf tltatdstps psvqasqnys vtiaaatlvl aqptlppavr gsaynqvlta
     1081 sggvapyrys igsgtlpagl tlasdgtlsg tpttqgtssf tiavadagna satqaysftv
     1141 sdaapvavad vaatmsdaav tvavtandtg nitaiaiaaa ptngtavvng lelvytpaag
     1201 fvgtdvvsyt vtgsggtsaa atvtiavnar pvavsvtaaa vpgeaqqvdl trnatggpfv
     1261 aaavvavlpa sagtatitqv gglataaaar asgaspaaaa maetptfmlt ftpnpafvgq
     1321 atvqftlsna fatsvpanvv ftiaprrdps vdaevrglid aqsestrrfa raqidnfqrr
     1381 leathrggst fsnavsfqpt shcrqadrgi saqpcspdtq eadndfrdap avassgtsta
     1441 qgqgdlglwv ggairsgsld kqsnsngvdf qtdglsvgad yrvaqslaig aglgwgrdds
     1501 dvgrngshsk ataytmalya sfhpgkafff dtlvgyqlls ydlrryvtdd asmaegnrdg
     1561 kqwiaslstg adlqrgelqi tpyarvdvar atldgyvedg vapfalrydd mdva
//
LOCUS       WP_258080621             107 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-hydroxy-acid oxidizing protein, partial [Xanthomonas
            arboricola].
ACCESSION   WP_258080621
VERSION     WP_258080621.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 107)
  AUTHORS   Xia,Z.X. and Mathews,F.S.
  TITLE     Molecular structure of flavocytochrome b2 at 2.4 A resolution
  JOURNAL   J Mol Biol 212 (4), 837-863 (1990)
   PUBMED   2329585
REFERENCE   2  (residues 1 to 107)
  AUTHORS   Lindqvist,Y.
  TITLE     Refined structure of spinach glycolate oxidase at 2 A resolution
  JOURNAL   J Mol Biol 209 (1), 151-166 (1989)
   PUBMED   2681790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013253.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01070.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..>107
                     /product="alpha-hydroxy-acid oxidizing protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
     Region          1..>107
                     /region_name="lldD"
                     /note="L-lactate dehydrogenase; Provisional; PRK11197"
                     /db_xref="CDD:183033"
ORIGIN      
        1 miisaasdyr aaaqarlppf lfhyidggay aehtlrrnva dladialrqr vlrnmsdlsl
       61 gtelfgetla mpvalapvgl tgmyarrgev qaaraaaarg ipftlst
//
LOCUS       WP_258080624             130 aa            linear   BCT 02-MAR-2025
DEFINITION  S1 RNA-binding domain-containing protein, partial [Xanthomonas
            arboricola].
ACCESSION   WP_258080624
VERSION     WP_258080624.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 130)
  AUTHORS   Bycroft,M., Hubbard,T.J., Proctor,M., Freund,S.M. and Murzin,A.G.
  TITLE     The solution structure of the S1 RNA binding domain: a member of an
            ancient nucleic acid-binding fold
  JOURNAL   Cell 88 (2), 235-242 (1997)
   PUBMED   9008164
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012784.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00575.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..>130
                     /product="S1 RNA-binding domain-containing protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
     Region          1..>129
                     /region_name="PRK11712"
                     /note="ribonuclease G; Provisional"
                     /db_xref="CDD:183285"
ORIGIN      
        1 mseeilvnvt pretrvavie ngmlqelhie rgwrrgvvgn iykgkvqrvm pgmqaafvel
       61 gleraaflha ndvvrpapap asvvdteetp ippppaaavp ivellrdgqe ivvqvvkdpi
      121 gtkgarlttq
//
LOCUS       WP_258080627             175 aa            linear   BCT 02-MAR-2025
DEFINITION  pectinesterase family protein, partial [Xanthomonas arboricola].
ACCESSION   WP_258080627
VERSION     WP_258080627.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013276.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01095.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         <1..175
                     /product="pectinesterase family protein"
                     /GO_function="GO:0030599 - pectinesterase activity
                     [Evidence IEA]"
                     /GO_process="GO:0042545 - cell wall modification [Evidence
                     IEA]"
     Region          <1..172
                     /region_name="PemB"
                     /note="Pectin methylesterase and related acyl-CoA
                     thioesterases [Carbohydrate transport and metabolism,
                     Lipid transport and metabolism]; COG4677"
                     /db_xref="CDD:443713"
ORIGIN      
        1 dgdraafrnv rflgyqdtly lrgaklsyff dcyvegtvdf vfgagtalfe nvqlhslgdg
       61 yltaastpqe sargfvfrna rvtaasgvtr vflgrpwrpy asvsfigsql gahilpegwn
      121 nwgntaneat aryseyqssg aganpsrrvk wsrqltaaqa aaldrntilg swrpf
//
LOCUS       WP_258080655             436 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase 87 family protein [Nocardia nova].
ACCESSION   WP_258080655
VERSION     WP_258080655.1
KEYWORDS    RefSeq.
SOURCE      Nocardia nova
  ORGANISM  Nocardia nova
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 436)
  AUTHORS   Birch,H.L., Alderwick,L.J., Bhatt,A., Rittmann,D., Krumbach,K.,
            Singh,A., Bai,Y., Lowary,T.L., Eggeling,L. and Besra,G.S.
  TITLE     Biosynthesis of mycobacterial arabinogalactan: identification of a
            novel alpha(1-->3) arabinofuranosyltransferase
  JOURNAL   Mol Microbiol 69 (5), 1191-1206 (2008)
   PUBMED   18627460
REFERENCE   2  (residues 1 to 436)
  AUTHORS   Morita,Y.S., Sena,C.B., Waller,R.F., Kurokawa,K., Sernee,M.F.,
            Nakatani,F., Haites,R.E., Billman-Jacobe,H., McConville,M.J.,
            Maeda,Y. and Kinoshita,T.
  TITLE     PimE is a polyprenol-phosphate-mannose-dependent
            mannosyltransferase that transfers the fifth mannose of
            phosphatidylinositol mannoside in mycobacteria
  JOURNAL   J Biol Chem 281 (35), 25143-25155 (2006)
   PUBMED   16803893
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021134.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09594.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Nocardia nova"
                     /db_xref="taxon:37330"
     Protein         1..436
                     /product="glycosyltransferase 87 family protein"
                     /GO_function="GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=47302
     Region          19..427
                     /region_name="PMT_2"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; cl21590"
                     /db_xref="CDD:473917"
ORIGIN      
        1 mndrsrvadp delpattssa rstgglttrq rrllmiaial fvvsaivswa ahiwtgyidl
       61 qvyrngartw ldggdlygpm pkvygiglpf typplaalff aplalmplav aewlvlltsm
      121 aslavtlwlv lvrvrpgmdr ssrvilliga lavlglsepv rqtynfgqin lvlmaavald
      181 alvrkpfwpr gmligitvsv klvpagylly fllrrdwrac vtligsaiga ialayllfph
      241 dsteywfhtl idtgrigppq yagnqslkgf afrlgvsdta atgiwiglsl iavglaalwm
      301 krlldaghhv sallvnsaav llvspvswsh hwvwvapall vagdliarmp aadapgtpgr
      361 aarrrrmwia vtaaitvlfm vgpqwvlphn adrelrwaww qqiigssyvl vafaalviaa
      421 iayrpsgmrn aasaae
//
LOCUS       WP_258080708             288 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Nocardia nova].
ACCESSION   WP_258080708
VERSION     WP_258080708.1
KEYWORDS    RefSeq.
SOURCE      Nocardia nova
  ORGANISM  Nocardia nova
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 288)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 288)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Nocardia nova"
                     /db_xref="taxon:37330"
     Protein         1..288
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=30777
     Region          <24..258
                     /region_name="PRK07201"
                     /note="SDR family oxidoreductase"
                     /db_xref="CDD:235962"
ORIGIN      
        1 mtntaspgrp laervatrll yptsrpqdaa lreavsgrvv lvtgashgig kvtaakfaaa
       61 gavvvmvars aaeldaaahd itaaggiaht ystdltdmda vaelardila thgrvdvvin
      121 naghsirrsi dqsydrfhdf trtidinylg pvrlllallp amrergrghi vnistwglrm
      181 ppaprwaayg askaafdqwl rtvatevaad gvtttsiymp lvhtrmsapt dfgsmpglta
      241 aeaadlvcha vvakpveisp wwsgplqawt dltrgpmqrl marsfrft
//
LOCUS       WP_258080709            1289 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein [Nocardia nova].
ACCESSION   WP_258080709
VERSION     WP_258080709.1
KEYWORDS    RefSeq.
SOURCE      Nocardia nova
  ORGANISM  Nocardia nova
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 1289)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1289
                     /organism="Nocardia nova"
                     /db_xref="taxon:37330"
     Protein         1..1289
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=137625
     Region          198..1283
                     /region_name="recB"
                     /note="exonuclease V subunit beta; Provisional; cl40735"
                     /db_xref="CDD:477421"
ORIGIN      
        1 mteelfpvtd lrtaeapaht tpqrrraram hetadtgelf aaeaaqsgna aatadtaadt
       61 pgaaadagvd nrrggsdvag rgpesdmaep aaagecadad qqdqsdpdrg dvaatvdtpg
      121 ggtaagcvde rssggfdlad rtpgsgapgv staaerrard veqcavdrga wrrrsarvag
      181 svgaspaqfd lcgelptgtt vleasagtgk tyaivglavr fvaeglvdis qlllvtfsra
      241 atqelrertr erfvtvaaal ddpeaaraga deliahlaha dpaevarrrr rlvaalsdfd
      301 agtistthgf cqrmldelgi agehdprvrl vegieelvst vaedlylary arggapmpvr
      361 qalslaaaav adrrarlvpg eelgdhpaae aaafaaavra evdrrkrlsg irdfddqlvl
      421 lhdvladpvh geracrrird rfrvtlvdef qdtdplqwdi lrrvfhdhtt lvlvgdpkqa
      481 iyafrgaevl syldavahad trreldtnrr sdagllaalh hmlggaalgh aqitvppvtg
      541 vrpqsrltgp egaavplrlr cfprqgagal ngsgfpvvgr qrdrvatdla adivrtlesg
      601 arigdralgp gdiavlvrtr aqidlvrael dragvasvla ggasvfatrs atdwlwvlra
      661 leqphrgdrv rlaattpllg lsaadidagg adlvgrlstq lrdaarlfar sgfaavfdrl
      721 saqaqpaprl laqsggerrl tdlrhiaqll devavreslg ltaltrwlad rvrdpasgav
      781 agrsrrldrd aaavqiatvh askglefpvv ylpfawdgak nphpstllfh dgdervldvg
      841 gpeapgyaeh rrrceaeeag eelrllyvav traqcqvvaw wapaygtaaa plhrmilgrv
      901 pgsaevpars evpadpivlq qlrewaaaag pglieiepvr aavearlrte rghtgdkele
      961 aarftrsvdh dwrrtsysal tasahetahg atdfvatdtv esgsdeplss apelgpglgs
     1021 edefagaaps lmndlpygae fgtlvhgvle lvdtdapdla aevrlrceqa veqlmadidp
     1081 galahalvev lrtpcdpval adirsrdrln elefelplag gdepvaqrvt vrrigallre
     1141 hlrsddpfat yadaldllgd vplrgyltgs idavlrtdgp rflvvdyktn rlgtgaltva
     1201 hyrrdrmaee mmrshyplqa llysaalhry lrwrlpgydp arhlggvryl fvrgmigpat
     1261 ppghgvfgwd ppaelivals dllagkgsr
//
LOCUS       WP_258080721             411 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Nocardia nova].
ACCESSION   WP_258080721
VERSION     WP_258080721.1
KEYWORDS    RefSeq.
SOURCE      Nocardia nova
  ORGANISM  Nocardia nova
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 411)
  AUTHORS   Todone,F., Vanoni,M.A., Mozzarelli,A., Bolognesi,M., Coda,A.,
            Curti,B. and Mattevi,A.
  TITLE     Active site plasticity in D-amino acid oxidase: a crystallographic
            analysis
  JOURNAL   Biochemistry 36 (19), 5853-5860 (1997)
   PUBMED   9153426
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013434.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01266.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Nocardia nova"
                     /db_xref="taxon:37330"
     Protein         1..411
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=44386
     Region          57..392
                     /region_name="PRK06753"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:168661"
ORIGIN      
        1 mcgighflft fpqqwttsvv ssttdvvedi vtrtpsaivv gggiaglaaa lgltargwrv
       61 evleqaprig esgsgislwa ngvramdalg lgdqvrsagr ieteggirdr kgrwlsrtdt
      121 nvlerrygpl vvirrsdlfd ilaaalpdgv lrtatkvtrv engsattvsv thsmgvsead
      181 vvigadgihs avrrslwpqg tlpryagyta wrmitteldf rpesgeiwgr gerfgvvpla
      241 dgcaylfava napagerhrd gelaqvrarf grwpapiptl lsavspeavl hhdlfelpdl
      301 dtfvrrrval igdaahamtp nlgqganqal edavtlaall drhaidpalg eydrlrrprs
      361 qaiarrsrri gmvaqwsapp atflrdnair lasgramlrn ldpvlswhpp e
//
LOCUS       WP_258080733             168 aa            linear   BCT 02-MAR-2025
DEFINITION  deaminase [Nocardia nova].
ACCESSION   WP_258080733
VERSION     WP_258080733.1
KEYWORDS    RefSeq.
SOURCE      Nocardia nova
  ORGANISM  Nocardia nova
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 168)
  AUTHORS   Iyer,L.M., Zhang,D., Rogozin,I.B. and Aravind,L.
  TITLE     Evolution of the deaminase fold and multiple origins of eukaryotic
            editing and mutagenic nucleic acid deaminases from bacterial toxin
            systems
  JOURNAL   Nucleic Acids Res 39 (22), 9473-9497 (2011)
   PUBMED   21890906
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025793.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14437.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Nocardia nova"
                     /db_xref="taxon:37330"
     Protein         1..168
                     /product="deaminase"
                     /GO_function="GO:0008251 - tRNA-specific adenosine
                     deaminase activity [Evidence IEA]"
                     /GO_process="GO:0002100 - tRNA wobble adenosine to inosine
                     editing [Evidence IEA]"
                     /calculated_mol_wt=17955
     Region          25..>165
                     /region_name="RibD1"
                     /note="Riboflavin biosynthesis protein RibD, pyrimidine
                     deaminase domain [Coenzyme transport and metabolism];
                     COG0117"
                     /db_xref="CDD:439887"
ORIGIN      
        1 mttesdawes vesasrvpgr pgahrfwmhh aiglarlcpp satafsvgav ivgpdgvela
       61 hgysretdak vhaeesalnk lgadprlpqa tiystlepcs trasvgrapc adrilaagip
      121 rvviawrepr tfvencvgve nlrdhgvevv elpdlaeeam smnrhlal
//
LOCUS       WP_258080752             351 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma factor [Nocardia nova].
ACCESSION   WP_258080752
VERSION     WP_258080752.1
KEYWORDS    RefSeq.
SOURCE      Nocardia nova
  ORGANISM  Nocardia nova
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 351)
  AUTHORS   Campbell,E.A., Muzzin,O., Chlenov,M., Sun,J.L., Olson,C.A.,
            Weinman,O., Trester-Zedlitz,M.L. and Darst,S.A.
  TITLE     Structure of the bacterial RNA polymerase promoter specificity
            sigma subunit
  JOURNAL   Mol Cell 9 (3), 527-539 (2002)
   PUBMED   11931761
REFERENCE   2  (residues 1 to 351)
  AUTHORS   Malhotra,A., Severinova,E. and Darst,S.A.
  TITLE     Crystal structure of a sigma 70 subunit fragment from E. coli RNA
            polymerase
  JOURNAL   Cell 87 (1), 127-136 (1996)
   PUBMED   8858155
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04542.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Nocardia nova"
                     /db_xref="taxon:37330"
     Protein         1..351
                     /product="sigma factor"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=36742
     Region          2..337
                     /region_name="PRK08241"
                     /note="RNA polymerase subunit sigma-70; cl30683"
                     /db_xref="CDD:357559"
ORIGIN      
        1 mgdrdelarr ferhrdllrd iayrmlgslh eaedavqeaw lrldraasat eakrgergva
       61 stgvadgsav draaphgsaa ngsaadglgi dnlaawlttv vsricldqlr srtarreefv
      121 dpmdrsaald sagtqvgsrs gaftepepea lladsvgram lvvlrtlspd ervafvlhdm
      181 favpfddiap ivgrttattk klasrarqrv rgdtstppve larhrevvta flsaaragdl
      241 gallavlapd vvrtadpavl ppgiasvvrg aaavaeetvl lrnrsqvadv alidgavgvv
      301 vapggrlaav llvtvrgdrv saydvvadae rlaalavtvl pepsvavkpi v
//
LOCUS       WP_258080822            1588 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4011 domain-containing protein [Nocardia nova].
ACCESSION   WP_258080822
VERSION     WP_258080822.1
KEYWORDS    RefSeq.
SOURCE      Nocardia nova
  ORGANISM  Nocardia nova
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024593.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13195.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1588
                     /organism="Nocardia nova"
                     /db_xref="taxon:37330"
     Protein         1..1588
                     /product="DUF4011 domain-containing protein"
                     /calculated_mol_wt=174213
     Region          4..151
                     /region_name="DUF4011"
                     /note="Protein of unknown function (DUF4011); pfam13195"
                     /db_xref="CDD:463806"
     Region          266..>325
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            288..294
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          349..1193
                     /region_name="DNA2"
                     /note="Superfamily I DNA and/or RNA helicase [Replication,
                     recombination and repair]; COG1112"
                     /db_xref="CDD:440729"
     Region          1211..1307
                     /region_name="MTES_1575"
                     /note="REase_MTES_1575; pfam18741"
                     /db_xref="CDD:465853"
     Region          1432..1469
                     /region_name="DUF3320"
                     /note="Protein of unknown function (DUF3320); pfam11784"
                     /db_xref="CDD:432073"
ORIGIN      
        1 midlhvphng lpilddivha gtpltlaphd dlssihqlqg arraaeidpd vlraylsedh
       61 qlyaavpnna ytrrfkelar tartlfeetg ssnlyltlga lvhhtstgae araplfllpv
      121 kisggtgrkq fhittnttev aspnyclvew lrlkhnvsie aleapkldds gidivhalrg
      181 irsalvenni dlrvdevatl aicqfgtfgm wkdlsdswei leqspivrhl thhpgesfhd
      241 pnadgdagle qlevdesavp vpipadgsql raialaaagr tfvlegppgt gksqtitnli
      301 ahalelgktv lfvaekqaal dvvkrrlerv glqnftldlh gksqspnvir dqlkaaidns
      361 irynertwda rlaefrarla pladyprklh qrngidyslw safeeiletg dgpvapipia
      421 yvarpsenws avkaaldlfs raarpldiap gvpwslagai pssvgaeqia savrrfanaf
      481 daaetsdrvr sllaanddps qlvallepak hqlgrpvpda ptlawmggaq fsgslkalra
      541 eieqlqrnca pllatftpmf vetgdiaatv teaeecdkrm fgrkkkaeqf qrsmapfaqp
      601 gtdlapqrvl pllraipgvr ehvsrtqtla rellgpfmpa rwnplapgsa eelrpifdyi
      661 aatlrfidts pgewrllett gfpadreigl leevsdawtq lrhclgttdd dvtrwrngeh
      721 wltawkrtsg eliedaelfn arhlldwsrm ssylaplrqa gldefveall taripaadat
      781 aafirgtaat slderrrstg lnnflsdlrd geiddfvhaa eslreeqvka laatllerrp
      841 fragsltgev gelrrsldrr rgglsfrqlm nkyadhilaa tpcvfvspas laqfippgsa
      901 tfdivvfdea sqvtvaqaig algrgrsavi vgdsqqmppt sfgqvtasdd ddapeegela
      961 pedldsilte cvesgvprlw lswhyrsqde tlisfsnqky yggrlaslps pggdstagve
     1021 wrrvaghfnr edrgrehrtn rveaeavvee irtrlatphl ahqsigvvtf naqqrtlved
     1081 lldecddplv renlrpdaee gifvknlenv qgderdvilf taafstkpge tqlplnfgpl
     1141 srsggekrfn vaitrarrkv ivftsfdpsh idlsrtksvg mahlrgylem asygpsageh
     1201 prdglgldpi qrdicaglre rgyevdanyg lsdfvldlvv repgcehwqv aimldgprwa
     1261 erptaadrdl tprlletmmh wgsslrvwlp dwidnrgavl drvdaaiets rskreafeae
     1321 laaaaeeraa liakleaeat veradepapl dledveteds staeptddsa qrdepelvas
     1381 apiasslgsa aivldkpaar dwdgrgttyl captttlger tdldrtnsas vrriitdavr
     1441 etvetegpia ldrlarvvan rfgfdrvsaa rkafvidcvp telvhsgplg tfvwphqidr
     1501 atwlgyrttp ddmtrslnei apeeivnamr aagasaalet eplmratmai fkqrrlagas
     1561 rerleaciaa gladgrliri gshirpga
//
LOCUS       WP_258080873             250 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Nocardia nova].
ACCESSION   WP_258080873
VERSION     WP_258080873.1
KEYWORDS    RefSeq.
SOURCE      Nocardia nova
  ORGANISM  Nocardia nova
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 250)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Nocardia nova"
                     /db_xref="taxon:37330"
     Protein         1..250
                     /product="AMP-binding protein"
                     /calculated_mol_wt=26550
     Region          2..>214
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(129,132..137,139..140)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341301"
ORIGIN      
        1 mvdgerqyty aelsarinrl arhlvgagvg peslvvlgmr rsaelviaay avlaaggayv
       61 pvdpdqppar lrqmaetaap vrmliagdap dldipsiaid aleldglsdr pltaadrlap
      121 vrsantayvi ftsgstgtpk gvavqrgsld nqiawiadey gigerdvvlf ktpatfdvsv
      181 welfaplssg arlvvatpdg hrdtaylase frdrerkkee smdgtvdyaa iltqvlsfls
      241 sgssiaytpk
//
LOCUS       WP_258080987              85 aa            linear   BCT 02-MAR-2025
DEFINITION  2-oxoglutarate dehydrogenase E1 subunit family protein, partial
            [Nocardia nova].
ACCESSION   WP_258080987
VERSION     WP_258080987.1
KEYWORDS    RefSeq.
SOURCE      Nocardia nova
  ORGANISM  Nocardia nova
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027404.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16078.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Nocardia nova"
                     /db_xref="taxon:37330"
     Protein         1..>85
                     /product="2-oxoglutarate dehydrogenase E1 subunit family
                     protein"
     Region          5..>85
                     /region_name="kgd"
                     /note="multifunctional oxoglutarate
                     decarboxylase/oxoglutarate dehydrogenase thiamine
                     pyrophosphate-binding subunit/dihydrolipoyllysine-residue
                     succinyltransferase subunit; cl39092"
                     /db_xref="CDD:476867"
ORIGIN      
        1 mssstsqfgq nqwlvdemyq kykqdpssvd eswheflady tpespgeian stpaasapta
       61 apsapatpap apanvnnaap ktapt
//
LOCUS       WP_258081025             267 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5995 family protein [Nocardia nova].
ACCESSION   WP_258081025
VERSION     WP_258081025.1
KEYWORDS    RefSeq.
SOURCE      Nocardia nova
  ORGANISM  Nocardia nova
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 267)
  AUTHORS   Heinzelmann,E., Berger,S., Muller,C., Hartner,T., Poralla,K.,
            Wohlleben,W. and Schwartz,D.
  TITLE     An acyl-CoA dehydrogenase is involved in the formation of the Delta
            cis3 double bond in the acyl residue of the lipopeptide antibiotic
            friulimicin in Actinoplanes friuliensis
  JOURNAL   Microbiology (Reading) 151 (Pt 6), 1963-1974 (2005)
   PUBMED   15942003
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039623.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19458.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Nocardia nova"
                     /db_xref="taxon:37330"
     Protein         1..267
                     /product="DUF5995 family protein"
                     /calculated_mol_wt=28564
     Region          82..264
                     /region_name="DUF5995"
                     /note="Family of unknown function (DUF5995); pfam19458"
                     /db_xref="CDD:466095"
ORIGIN      
        1 maeaqcgtpl sagemqtvaa lsdtttigag ptldrldeav arnhriteil ashhdwrglf
       61 dvgldaveqs pvlplqhdps afadpeyaha isyellrrfl vnlhaqftgg apephwawyf
      121 qlagqcdqsp arvamagyna hltvdlayaa aavgskpena pdffhivdai arsgdliver
      181 ttqvynadlg plwrfyfvgd gldrlfgqgv atgpllevad lgynvvvwtn glalqnpata
      241 eatraeinal wsaddaafav lvrlggl
//
LOCUS       WP_258081035             503 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Nocardia nova].
ACCESSION   WP_258081035
VERSION     WP_258081035.1
KEYWORDS    RefSeq.
SOURCE      Nocardia nova
  ORGANISM  Nocardia nova
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 503)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   2  (residues 1 to 503)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02770.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Nocardia nova"
                     /db_xref="taxon:37330"
     Protein         1..503
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=54994
     Region          110..476
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(181,212,214,245,247,458..460,462,464)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mavgvngvvt ppisrsrgrr rspagtvksm larsycvvhh rsghrrmses liyrgaytcp
       61 ngscgrdhag rlppladvgm sesehdmkfr egsmtstdgp vrapqvslae evrswladnw
      121 hgvddaawrs rvvgagwaap twptdaygrg lsrveaktva aefravgarg aavesrgypa
      181 lagntivefg spelkrevlp kllsgewsrg cllysepgng sdlaglqtra eldndvfvvn
      241 gqkiwttggh eadcalllar tdwdkpkhag isffiipmdl pgievrpikq mtgesdfnev
      301 fltdvrvpag sligelndgw rvlqtalkee rrtmgfelga akrekdgrap iftgandlie
      361 aareagkldd qavrqeimri hswrlvndwn airahkqiqa gggsslaslg klaksrilhs
      421 swalrfrllg argllydrad eqayevdhel mwsfinsigg gtdqiqrnii serilglpkg
      481 yepdrgvpfr evrkggtarp ves
//
LOCUS       WP_258081068             552 aa            linear   BCT 02-MAR-2025
DEFINITION  thiolase C-terminal domain-containing protein [Nocardia nova].
ACCESSION   WP_258081068
VERSION     WP_258081068.1
KEYWORDS    RefSeq.
SOURCE      Nocardia nova
  ORGANISM  Nocardia nova
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 552)
  AUTHORS   Brown,A.K., Sridharan,S., Kremer,L., Lindenberg,S., Dover,L.G.,
            Sacchettini,J.C. and Besra,G.S.
  TITLE     Probing the mechanism of the Mycobacterium tuberculosis
            beta-ketoacyl-acyl carrier protein synthase III mtFabH: factors
            influencing catalysis and substrate specificity
  JOURNAL   J Biol Chem 280 (37), 32539-32547 (2005)
   PUBMED   16040614
REFERENCE   2  (residues 1 to 552)
  AUTHORS   Kursula,P., Ojala,J., Lambeir,A.M. and Wierenga,R.K.
  TITLE     The catalytic cycle of biosynthetic thiolase: a conformational
            journey of an acetyl group through four binding modes and two
            oxyanion holes
  JOURNAL   Biochemistry 41 (52), 15543-15556 (2002)
   PUBMED   12501183
REFERENCE   3  (residues 1 to 552)
  AUTHORS   Scarsdale,J.N., Kazanina,G., He,X., Reynolds,K.A. and Wright,H.T.
  TITLE     Crystal structure of the Mycobacterium tuberculosis
            beta-ketoacyl-acyl carrier protein synthase III
  JOURNAL   J Biol Chem 276 (23), 20516-20522 (2001)
   PUBMED   11278743
REFERENCE   4  (residues 1 to 552)
  AUTHORS   Modis,Y. and Wierenga,R.K.
  TITLE     Crystallographic analysis of the reaction pathway of Zoogloea
            ramigera biosynthetic thiolase
  JOURNAL   J Mol Biol 297 (5), 1171-1182 (2000)
   PUBMED   10764581
REFERENCE   5  (residues 1 to 552)
  AUTHORS   Mathieu,M., Modis,Y., Zeelen,J.P., Engel,C.K., Abagyan,R.A.,
            Ahlberg,A., Rasmussen,B., Lamzin,V.S., Kunau,W.H. and Wierenga,R.K.
  TITLE     The 1.8 A crystal structure of the dimeric peroxisomal
            3-ketoacyl-CoA thiolase of Saccharomyces cerevisiae: implications
            for substrate binding and reaction mechanism
  JOURNAL   J Mol Biol 273 (3), 714-728 (1997)
   PUBMED   9402066
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047238.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22691.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Nocardia nova"
                     /db_xref="taxon:37330"
     Protein         1..552
                     /product="thiolase C-terminal domain-containing protein"
                     /calculated_mol_wt=58832
     Region          20..>111
                     /region_name="COG1545"
                     /note="Uncharacterized OB-fold protein, contains Zn-ribbon
                     domain [General function prediction only]"
                     /db_xref="CDD:441154"
     Region          174..550
                     /region_name="SCP-x_thiolase"
                     /note="Thiolase domain associated with sterol carrier
                     protein (SCP)-x isoform and related proteins; SCP-2 has
                     multiple roles in intracellular lipid circulation and
                     metabolism. The N-terminal presequence in the SCP-x
                     isoform represents a peroxisomal...; cd00829"
                     /db_xref="CDD:238425"
     Site            order(247,454,505)
                     /site_type="active"
                     /db_xref="CDD:238425"
ORIGIN      
        1 mtitaarrpl pqptlasaef wasgadgalr ighcrtcarw thpqraicph crgrdigmep
       61 vsgratvvgf tvnsqqwlpa lpppyvvaiv alqedsavrl ttnivgcdpa evrvgmrvrv
      121 rfeqaaedvw lplfepdpea pdepgpipep edyrsrlrpm asadkfedkv aitgvgqsri
      181 grrlmvdpls ltvdaclsav adagltlddi dglstypgaa mggmseggim pveealrirp
      241 twvngggdlp gqngsiiaam lavasglcrh vlcfrtvwes shqalqregr whdgagratg
      301 mmewrlpfga msaanwiacq ashyfhrygg drevlgriav gartnaglnp davyrdpitl
      361 ddylsarmvs spfglydcdv pvdgaiaviv saadtaadla kppvfveavg tqimetlswd
      421 qgtlthlpqs lgpaahlwsr tdlrpenvdv allydgftfn alswlealgf cefggarefi
      481 gdgsaialgg rlplnphggq lsagrthgyg ffreavlqlr geaqgrqvad akvavvtagg
      541 gvpsgaillr ns
//
LOCUS       WP_258081080             595 aa            linear   BCT 02-MAR-2025
DEFINITION  MetQ/NlpA family ABC transporter substrate-binding protein
            [Nocardia nova].
ACCESSION   WP_258081080
VERSION     WP_258081080.1
KEYWORDS    RefSeq.
SOURCE      Nocardia nova
  ORGANISM  Nocardia nova
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 595)
  AUTHORS   Nguyen,P.T., Lai,J.Y., Lee,A.T., Kaiser,J.T. and Rees,D.C.
  TITLE     Noncanonical role for the binding protein in substrate uptake by
            the MetNI methionine ATP Binding Cassette (ABC) transporter
  JOURNAL   Proc Natl Acad Sci U S A 115 (45), E10596-E10604 (2018)
   PUBMED   30352853
REFERENCE   2  (residues 1 to 595)
  AUTHORS   Schwechheimer,C. and Kuehn,M.J.
  TITLE     Synthetic effect between envelope stress and lack of outer membrane
            vesicle production in Escherichia coli
  JOURNAL   J Bacteriol 195 (18), 4161-4173 (2013)
   PUBMED   23852867
REFERENCE   3  (residues 1 to 595)
  AUTHORS   Zhang,Z., Feige,J.N., Chang,A.B., Anderson,I.J., Brodianski,V.M.,
            Vitreschak,A.G., Gelfand,M.S. and Saier,M.H. Jr.
  TITLE     A transporter of Escherichia coli specific for L- and D-methionine
            is the prototype for a new family within the ABC superfamily
  JOURNAL   Arch Microbiol 180 (2), 88-100 (2003)
   PUBMED   12819857
REFERENCE   4  (residues 1 to 595)
  AUTHORS   Gal,J., Szvetnik,A., Schnell,R. and Kalman,M.
  TITLE     The metD D-methionine transporter locus of Escherichia coli is an
            ABC transporter gene cluster
  JOURNAL   J Bacteriol 184 (17), 4930-4932 (2002)
   PUBMED   12169620
REFERENCE   5  (residues 1 to 595)
  AUTHORS   Yu,F., Inouye,S. and Inouye,M.
  TITLE     Lipoprotein-28, a cytoplasmic membrane lipoprotein from Escherichia
            coli. Cloning, DNA sequence, and expression of its gene
  JOURNAL   J Biol Chem 261 (5), 2284-2288 (1986)
   PUBMED   3003106
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015159.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03180.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Nocardia nova"
                     /db_xref="taxon:37330"
     Protein         1..595
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /calculated_mol_wt=62061
     Region          18..266
                     /region_name="NlpA"
                     /note="ABC-type metal ion transport system, periplasmic
                     component/surface antigen [Inorganic ion transport and
                     metabolism]; COG1464"
                     /db_xref="CDD:441073"
     Region          356..530
                     /region_name="YcnI"
                     /note="Uncharacterized conserved protein YcnI, contains
                     cohesin/reeler-like domain [Function unknown]; COG4549"
                     /db_xref="CDD:443613"
ORIGIN      
        1 mhrkdrrrpp aamrapvrrg iativalilf vpaaaagcgs atkvsyepaa ddenalvvyv
       61 dggddreild yaihnllpds vkvkpvdaag danariaagk gdlsyfqhip afeadsqkns
      121 ytnlsivskv nvvpyavyss kwrdlkdttd wvhvglvqdq vagvslphga qvalpatptg
      181 farglyllqs aglvtldrpf ggtsaadlti gqanvrdsar hlsllplsfd qdlasiyhsy
      241 davvlspeqa aslglqpakd alaiepgprk slcaracrav paggrpagag idprageppa
      301 gpvpgdeipg rgyrrggcgr qvtssempgr npyaqplhtr ktmadsdire rrapvrrhlv
      361 rrcsaaviav iavplvayaa paaahvqsdg tpvtkggygv vhlivpgesa tantvgltvt
      421 ipagvdlksa rtqpipgwta sverdqaagr vtkivwnant padgfsntqy refsfsagpw
      481 pksvdsvalp sdqrysdgsv vswneiavdk asepahpapv vpvtataagh sddgghavsa
      541 antapdrhdd aalhdggess asgwwqalsv valllavaag aaatlalrrd reprs
//
LOCUS       WP_258081083             279 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase [Nocardia nova].
ACCESSION   WP_258081083
VERSION     WP_258081083.1
KEYWORDS    RefSeq.
SOURCE      Nocardia nova
  ORGANISM  Nocardia nova
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 279)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 279)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Nocardia nova"
                     /db_xref="taxon:37330"
     Protein         1..279
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=30396
     Region          <52..247
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
ORIGIN      
        1 mpqtriqprp istsptsras tshdrnpqyn ispaiarsrq vrklanspaa sqihrpdpdv
       61 pleetlgald dlvsagkiry ygtttfephq lveaqwvaed rrlhrpvseq ppysilarga
      121 eratlpvaqr yglgvltwsp laggwlsgry rdgarapess rlqrqphrhd paltvnqrkr
      181 avaeelakla deaglslvhl alafvlqhpa vssviigprt leqlggqlga vdvrlstdvl
      241 drideivapg vtispadegy lppsltesal rrhlpgarr
//
LOCUS       WP_258081185             143 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Nocardia nova].
ACCESSION   WP_258081185
VERSION     WP_258081185.1
KEYWORDS    RefSeq.
SOURCE      Nocardia nova
  ORGANISM  Nocardia nova
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Nocardia nova"
                     /db_xref="taxon:37330"
     Protein         1..143
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=15089
     Region          <2..131
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 meladaclag eeerargiae sfgdlgaiqa ypatkaalaw yartrsaeyi adgirlnaia
       61 pgiidtpmtq egskdaltge gmkqflamtp igrpghpeei adlaafllsd kagffvgsvi
      121 fcdggidaaf rgkdwpavwn pqr
//
LOCUS       WP_258081210             545 aa            linear   BCT 02-MAR-2025
DEFINITION  HNH endonuclease [Nocardia nova].
ACCESSION   WP_258081210
VERSION     WP_258081210.1
KEYWORDS    RefSeq.
SOURCE      Nocardia nova
  ORGANISM  Nocardia nova
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 545)
  AUTHORS   Zhang,L., Huang,Y., Xu,D., Yang,L., Qian,K., Chang,G., Gong,Y.,
            Zhou,X. and Ma,K.
  TITLE     Biochemical characterization of a thermostable HNH endonuclease
            from deep-sea thermophilic bacteriophage GVE2
  JOURNAL   Appl Microbiol Biotechnol 100 (18), 8003-8012 (2016)
   PUBMED   27131500
REFERENCE   2  (residues 1 to 545)
  AUTHORS   Dalgaard,J.Z., Klar,A.J., Moser,M.J., Holley,W.R., Chatterjee,A.
            and Mian,I.S.
  TITLE     Statistical modeling and analysis of the LAGLIDADG family of
            site-specific endonucleases and identification of an intein that
            encodes a site-specific endonuclease of the HNH family
  JOURNAL   Nucleic Acids Res 25 (22), 4626-4638 (1997)
   PUBMED   9358175
REFERENCE   3  (residues 1 to 545)
  AUTHORS   Shub,D.A., Goodrich-Blair,H. and Eddy,S.R.
  TITLE     Amino acid sequence motif of group I intron endonucleases is
            conserved in open reading frames of group II introns
  JOURNAL   Trends Biochem Sci 19 (10), 402-404 (1994)
   PUBMED   7817395
REFERENCE   4  (residues 1 to 545)
  AUTHORS   Gorbalenya,A.E.
  TITLE     Self-splicing group I and group II introns encode homologous
            (putative) DNA endonucleases of a new family
  JOURNAL   Protein Sci 3 (7), 1117-1120 (1994)
   PUBMED   7920259
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013964.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01844.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Nocardia nova"
                     /db_xref="taxon:37330"
     Protein         1..545
                     /product="HNH endonuclease"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=58942
     Region          20..165
                     /region_name="TerD_like"
                     /note="Uncharacterized proteins involved in stress
                     response, similar to tellurium resistance terD; cd06974"
                     /db_xref="CDD:132992"
     Region          198..228
                     /region_name="DUF2510"
                     /note="Protein of unknown function (DUF2510); pfam10708"
                     /db_xref="CDD:431450"
     Region          481..541
                     /region_name="McrA"
                     /note="5-methylcytosine-specific restriction endonuclease
                     McrA [Defense mechanisms]; COG1403"
                     /db_xref="CDD:441013"
ORIGIN      
        1 mttmrptvdg datpvptsll svlvswrsta sldahaillt aggrvrsard vvyfnaprhp
       61 sqavtvdqdp qpgtarlsvs lprteaeivr ilitgsgsde plaalpglav svedaeglva
      121 radvaaepga raavfgefrr aedrwwfvrg gpqhagaael fttfgapvad saqhrsqris
      181 lhrnrftapm pappderpdw ypdpadtasl rwwdgsrwte qtvarppvhp rgcprcgrrr
      241 gwrplgaapc racaaevedy lsgwrtralr vltttgpsgp dwdelwtrir hqridpdtar
      301 aalrgpavah lermaafala dgtiggaele rfdttvaala vrdaavdelr rslrrlrils
      361 rlragelpvi avpdlhldpq ervhldtaat rirrsgrgaq aspgrlicsn rklrfigpda
      421 gieipwarav svtttetgvt vaatsargga efdvdepelv aaivegalrv akrltvapgr
      481 rdsrsiapdi kaevwhrdgg rcvecgathy lefdhiipls rggatsaanl qilcrgcnrd
      541 kgdhi
//
LOCUS       WP_258081421             266 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Nocardia nova].
ACCESSION   WP_258081421
VERSION     WP_258081421.1
KEYWORDS    RefSeq.
SOURCE      Nocardia nova
  ORGANISM  Nocardia nova
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 266)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Nocardia nova"
                     /db_xref="taxon:37330"
     Protein         1..>266
                     /product="AMP-binding protein"
     Region          19..>266
                     /region_name="MenE/FadK"
                     /note="O-succinylbenzoic acid-CoA ligase MenE or related
                     acyl-CoA synthetase (AMP-forming) [Lipid transport and
                     metabolism]; COG0318"
                     /db_xref="CDD:440087"
ORIGIN      
        1 mtaaeilapl dagdfadtve lleaaalvhg lrdayveadg trisfadwva raravarqls
       61 shgvgrgdvv almlpsgidy avcyaaaaml gavttglnpr lgpreidaal rqadpvlvvr
      121 aatmpatgrd ipelaasqlt rellrhaatp sqpigrdapv sivfssgttg lpkgawfdan
      181 nlaasaqaag amsapydrrl tstpfahvgy msklwdqlvw gitlviapvp wsaaamfdvl
      241 raeritvaga vptqwaklle lpaltp
//
LOCUS       WP_258081413              44 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein, partial [Nocardia nova].
ACCESSION   WP_258081413
VERSION     WP_258081413.1
KEYWORDS    RefSeq.
SOURCE      Nocardia nova
  ORGANISM  Nocardia nova
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 44)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 44)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 44)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..44
                     /organism="Nocardia nova"
                     /db_xref="taxon:37330"
     Protein         <1..44
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
     Region          <1..38
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
ORIGIN      
        1 gygysteyda eryfrdaplm ivgegtneiq rnviagqlva rggi
//
LOCUS       WP_258081429              63 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5597 domain-containing protein [Enterococcus faecium].
ACCESSION   WP_258081429
VERSION     WP_258081429.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 63)
  AUTHORS   Larsbrink,J., Thompson,A.J., Lundqvist,M., Gardner,J.G.,
            Davies,G.J. and Brumer,H.
  TITLE     A complex gene locus enables xyloglucan utilization in the model
            saprophyte Cellvibrio japonicus
  JOURNAL   Mol Microbiol 94 (2), 418-433 (2014)
   PUBMED   25171165
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037199.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18120.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..63
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..63
                     /product="DUF5597 domain-containing protein"
                     /calculated_mol_wt=7583
     Region          <5..26
                     /region_name="DUF5597"
                     /note="Domain of unknown function (DUF5597); pfam18120"
                     /db_xref="CDD:465657"
ORIGIN      
        1 mfrnfeegyf egkkwtterv lngderytpy ignmpkiikf slytypkkeq evvheylade
       61 rnl
//
LOCUS       WP_258081452             278 aa            linear   BCT 02-MAR-2025
DEFINITION  FRG domain-containing protein [Enterococcus faecium].
ACCESSION   WP_258081452
VERSION     WP_258081452.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08867.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..278
                     /product="FRG domain-containing protein"
                     /calculated_mol_wt=32694
     Region          <75..112
                     /region_name="FRG"
                     /note="FRG domain; cl07460"
                     /db_xref="CDD:447389"
ORIGIN      
        1 mtkikklsdf ldyiskysen vfyrgenmny genaciakal cdtvnydsys erinifsrki
       61 resallkeea llipyaqhsg latklldits nplvalyfac qptndtsdgy iyifddyana
      121 tnllekypkf dlekvflnyv tflyenkqkl tnqseknyli sdhneikefg kcidnyrkky
      181 snkdfaqnds pftnklkklr lfmdeiklwi isicsdnkem asfllpenyq entpaikfih
      241 pykeecyeyc eqqyqiskhe ireylvslec iiqtcndi
//
LOCUS       WP_258081447             191 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Enterococcus faecium].
ACCESSION   WP_258081447
VERSION     WP_258081447.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017416.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05598.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..>191
                     /product="transposase"
     Region          10..>182
                     /region_name="transpos_IS1182"
                     /note="IS1182 family transposase; NF033551"
                     /db_xref="CDD:468080"
ORIGIN      
        1 mmrkqsiegr nqfamltidd lvpkdhlvrk idaaiqfdfi ypivestyst hgrpsidpvv
       61 liklvfiqyl fgirsmrqti kdvetnvayr wflgysfedp iphfstfgkn yvrrfrettl
      121 fedifshile qavkagfvte dnlyidsthi kanankhkft kemtygqaka yqdeledein
      181 keriavgkrp f
//
LOCUS       WP_258081458             383 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein, partial [Enterococcus faecium].
ACCESSION   WP_258081458
VERSION     WP_258081458.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 383)
  AUTHORS   Aravind,L., Leipe,D.D. and Koonin,E.V.
  TITLE     Toprim--a conserved catalytic domain in type IA and II
            topoisomerases, DnaG-type primases, OLD family nucleases and RecR
            proteins
  JOURNAL   Nucleic Acids Res 26 (18), 4205-4213 (1998)
   PUBMED   9722641
REFERENCE   2  (residues 1 to 383)
  AUTHORS   Szafranski,P., Smith,C.L. and Cantor,C.R.
  TITLE     Cloning and analysis of the dnaG gene encoding Pseudomonas putida
            DNA primase
  JOURNAL   Biochim Biophys Acta 1352 (3), 243-248 (1997)
   PUBMED   9224947
REFERENCE   3  (residues 1 to 383)
  AUTHORS   Bergerat,A., de Massy,B., Gadelle,D., Varoutas,P.C., Nicolas,A. and
            Forterre,P.
  TITLE     An atypical topoisomerase II from Archaea with implications for
            meiotic recombination
  JOURNAL   Nature 386 (6623), 414-417 (1997)
   PUBMED   9121560
REFERENCE   4  (residues 1 to 383)
  AUTHORS   Versalovic,J. and Lupski,J.R.
  TITLE     The Haemophilus influenzae dnaG sequence and conserved bacterial
            primase motifs
  JOURNAL   Gene 136 (1-2), 281-286 (1993)
   PUBMED   8294018
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013878.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01751.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..383
                     /product="toprim domain-containing protein"
     Region          <1..345
                     /region_name="GyrB"
                     /note="DNA gyrase/topoisomerase IV, subunit B
                     [Replication, recombination and repair]; COG0187"
                     /db_xref="CDD:439957"
ORIGIN      
        1 eyarkvgllk erdknlegsd freglaavls irvpenllqf egqtkeklgt pvartvvdnv
       61 iseqmgfylq ensemsqmlv rkaikarear eaarkarees rngkkrkkge sllsgkltpa
      121 qsrnpkknel ylvegdsagg sakqgrdrkf qailplrgkv intekakmqd ilkneeintm
      181 iytigagvgp efsiedcnyd kviimtdadt dgahiqvlll tffyrymkpl ieagkvyial
      241 pplykvskgq gkkqvieyaw tddelaamik kvgkgymlqr ykglgemnae qlwettmdpt
      301 srtlirvrid daaqaerrvt tlmgdkvepr rkwienhvqf tleedgsild kkedteisps
      361 vsndlldeer adknennqlf eve
//
LOCUS       WP_258081457             207 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Enterococcus faecium].
ACCESSION   WP_258081457
VERSION     WP_258081457.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 207)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 207)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 207)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 207)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..207
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          16..>191
                     /region_name="NatA"
                     /note="ABC-type Na+ transport system, ATPase component
                     NatA [Energy production and conversion, Inorganic ion
                     transport and metabolism]; COG4555"
                     /db_xref="CDD:443618"
ORIGIN      
        1 vlftlhryle kaddfvivie nlfikeiere inckfeegit ylkgkngsgk tllldyisgl
       61 rsplpknski snntsciymr qnftfysrlt vnefihfieg ltkeskrnfl yllntffpni
      121 nfekykkkkl gllsggerrl iyilsilsie rkwyildepf snldqetrev lmviiktmnk
      181 ekkvnfilta henipldnlh vldfnsi
//
LOCUS       WP_258081481              77 aa            linear   BCT 02-MAR-2025
DEFINITION  SAM-dependent methyltransferase, partial [Enterococcus faecium].
ACCESSION   WP_258081481
VERSION     WP_258081481.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00590.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..>77
                     /product="SAM-dependent methyltransferase"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
     Region          17..>77
                     /region_name="TP_methylase"
                     /note="S-AdoMet-dependent tetrapyrrole methylases;
                     cl00304"
                     /db_xref="CDD:444820"
ORIGIN      
        1 mynqksfkgn pvygdlylvp tpignledms yrsvrmlqes dliasedtrn tqkllnhfei
       61 htpqkslheh nykervp
//
LOCUS       WP_258081559             306 aa            linear   BCT 02-MAR-2025
DEFINITION  universal stress protein [Nocardia nova].
ACCESSION   WP_258081559
VERSION     WP_258081559.1
KEYWORDS    RefSeq.
SOURCE      Nocardia nova
  ORGANISM  Nocardia nova
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (residues 1 to 306)
  AUTHORS   Sousa,M.C. and McKay,D.B.
  TITLE     Structure of the universal stress protein of Haemophilus influenzae
  JOURNAL   Structure 9 (12), 1135-1141 (2001)
   PUBMED   11738040
REFERENCE   2  (residues 1 to 306)
  AUTHORS   Zarembinski,T.I., Hung,L.W., Mueller-Dieckmann,H.J., Kim,K.K.,
            Yokota,H., Kim,R. and Kim,S.H.
  TITLE     Structure-based assignment of the biochemical function of a
            hypothetical protein: a test case of structural genomics
  JOURNAL   Proc Natl Acad Sci U S A 95 (26), 15189-15193 (1998)
   PUBMED   9860944
REFERENCE   3  (residues 1 to 306)
  AUTHORS   Nystrom,T. and Neidhardt,F.C.
  TITLE     Expression and role of the universal stress protein, UspA, of
            Escherichia coli during growth arrest
  JOURNAL   Mol Microbiol 11 (3), 537-544 (1994)
   PUBMED   8152377
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012791.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00582.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Nocardia nova"
                     /db_xref="taxon:37330"
     Protein         1..306
                     /product="universal stress protein"
                     /calculated_mol_wt=31820
     Region          24..159
                     /region_name="AANH_superfamily"
                     /note="Adenine nucleotide alpha hydrolase (AANH)
                     superfamily; cl00292"
                     /db_xref="CDD:469708"
     Region          173..305
                     /region_name="AANH_superfamily"
                     /note="Adenine nucleotide alpha hydrolase (AANH)
                     superfamily; cl00292"
                     /db_xref="CDD:469708"
ORIGIN      
        1 mtteesvtek sgpagqpeia tgpivvavdg sptslqavaw aardaalggs plqivhsiai
       61 pasfgpglaa gtaqpdwlrt dgeqilthat evardiggpd ldidaelgle liigdllvrs
      121 etagklvvgr rgrgalqrgl lgsvssalvh harcpvvvvt shsatdpvta rrpvlvgvdg
      181 sensepavea afaeahrrav evvalhswsd ttgldismfg wdtivraeht mlaerlapwr
      241 erypdlpvtl rvvrdnpaks lleqsdsaql vvvgsrgrgg fagmllgsts aalvgsvecp
      301 imvvrr
//
LOCUS       WP_258081699             326 aa            linear   BCT 02-MAR-2025
DEFINITION  protein kinase domain-containing protein [Enterococcus faecium].
ACCESSION   WP_258081699
VERSION     WP_258081699.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 326)
  AUTHORS   Hunter,T. and Plowman,G.D.
  TITLE     The protein kinases of budding yeast: six score and more
  JOURNAL   Trends Biochem Sci 22 (1), 18-22 (1997)
   PUBMED   9020587
REFERENCE   2  (residues 1 to 326)
  AUTHORS   Hanks,S.K. and Hunter,T.
  TITLE     Protein kinases 6. The eukaryotic protein kinase superfamily:
            kinase (catalytic) domain structure and classification
  JOURNAL   FASEB J 9 (8), 576-596 (1995)
   PUBMED   7768349
REFERENCE   3  (residues 1 to 326)
  AUTHORS   Hanks,S.K. and Quinn,A.M.
  TITLE     Protein kinase catalytic domain sequence database: identification
            of conserved features of primary structure and classification of
            family members
  JOURNAL   Methods Enzymol 200, 38-62 (1991)
   PUBMED   1956325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00069.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..326
                     /product="protein kinase domain-containing protein"
                     /GO_function="GO:0004672 - protein kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006468 - protein phosphorylation
                     [Evidence IEA]"
                     /calculated_mol_wt=37474
     Region          130..>308
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(133..136,139,141,150,152,185,199..202,243,247..248,
                     250,259..260)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
ORIGIN      
        1 mldsnalkev snvfigdsep gfkyksgsel vtffnqyfgv gdtyaqgfps rwryvydhlv
       61 dllnnhqidk ffniilskey ilsefkisev etvaraqeif qgfnhllrpy sfmlsskngq
      121 yhlaridedl kfigaggfan vylqlstgyi ikklkddffv dtgiksrfkr eykiteslqd
      181 ismiikvidf dedtysyrme qaettlaefv kennlnessk vtlisqimdv msevhsrniv
      241 hrdlsptnif vvgglvkiad fglgkdlnif sshqtmttaa vgqywycape qfmllkdgdk
      301 rsdiyslgry ykfhyewkss ecgpsi
//
LOCUS       WP_258081711              82 aa            linear   BCT 02-MAR-2025
DEFINITION  SulP family inorganic anion transporter, partial [Enterococcus
            faecium].
ACCESSION   WP_258081711
VERSION     WP_258081711.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00916.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..>82
                     /product="SulP family inorganic anion transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:1902358 - sulfate transmembrane transport
                     [Evidence IEA]"
     Region          15..>82
                     /region_name="SUL1"
                     /note="Sulfate permease or related transporter, MFS
                     superfamily [Inorganic ion transport and metabolism];
                     COG0659"
                     /db_xref="CDD:440424"
ORIGIN      
        1 mfknyvsslk kefsgydlsr fqkdllagit vaavalplal afgvssgada aaglitaiia
       61 givigglsgg fyqisgptga ma
//
LOCUS       WP_258081748             220 aa            linear   BCT 02-MAR-2025
DEFINITION  pilin N-terminal domain-containing protein, partial [Enterococcus
            faecium].
ACCESSION   WP_258081748
VERSION     WP_258081748.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 220)
  AUTHORS   Paterson,N.G. and Baker,E.N.
  TITLE     Structure of the full-length major pilin from Streptococcus
            pneumoniae: implications for isopeptide bond formation in
            gram-positive bacterial pili
  JOURNAL   PLoS One 6 (7), e22095 (2011)
   PUBMED   21760959
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16555.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..>220
                     /product="pilin N-terminal domain-containing protein"
     Region          29..181
                     /region_name="GramPos_pilinD1"
                     /note="Gram-positive pilin subunit D1, N-terminal domain;
                     pfam16555"
                     /db_xref="CDD:465172"
ORIGIN      
        1 mkklgwlslc lflllfkpaf tqaatetete mvqitlhkll fpngqlpknh pndgqekall
       61 qtyrglngvt fqvydvtdsf yhlwekgktv eeaqteiakn gassgtftae attttlnned
      121 giasfslaak dqekrdkayl fieskapevv kekaenmvvv lpvhgqnnqk lstihlypkn
      181 eendypdppf ekvleeprnd ftigekitys lhttipvnil
//
LOCUS       WP_258081762             330 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1430 domain-containing protein, partial [Enterococcus faecium].
ACCESSION   WP_258081762
VERSION     WP_258081762.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018897.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07242.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..330
                     /product="DUF1430 domain-containing protein"
     Region          <8..290
                     /region_name="bact_immun_7tm"
                     /note="bacteriocin-associated integral membrane (putative
                     immunity) protein; TIGR01654"
                     /db_xref="CDD:273736"
ORIGIN      
        1 klltlpvfyp vtigknhvdf iysnrfasaa dqelyetfnk ngsilvnvsd ylneeneqfg
       61 rgikinlnyl kkfplidvsg rliqiteeet hpvilipery rhtdlkndla qiteyyqeis
      121 ekepkflfik nnqpiytfip sipwiehypv veiltlknst ywernilsge iypllkikig
      181 slskerlfel ieesqlrdnl qlsfpytqte evavkvlsrs fhyliqifll tffsffllsy
      241 vmlciyfvyn crkiaifrss gyslfetykd ffmmnlikwg ttsviflfli erepkylfni
      301 fffsfidfil svvfilstek ksqlllmngg
//
LOCUS       WP_258081763             378 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Enterococcus faecium].
ACCESSION   WP_258081763
VERSION     WP_258081763.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..378
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=41276
     Region          1..341
                     /region_name="MFS_effux_SdrM"
                     /note="multidrug efflux MFS transporter SdrM; NF040895"
                     /db_xref="CDD:468830"
ORIGIN      
        1 mtavettivi taanaiansf greipiallf ssylfssals tpvfsrladq ygkkpifiig
       61 lllfmtgtfl cgisqsffil vffrmvqgig aggivpitfs lignlfdyes rgrimglnns
      121 awgiallaap llggllvenf swhwvffini pvglitilil llfydeekrp svsfsyqelg
      181 qylflitvlf lllvgiqiip dhfilgggvf lfgilvsfil lsyenkvkep vlpvetlrss
      241 dfllfnlvtf lmngammgfq vylplwmqtq lslspspggl allpssiffi tgsmiavplg
      301 khfgtkrllt fcmgvnglvf lilgflpqmt pyfvflilas fsgfgtgttv ttsvlsaqal
      361 atekksvryl vsspfaei
//
LOCUS       WP_258081774             885 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma 54-interacting transcriptional regulator [Enterococcus
            faecium].
ACCESSION   WP_258081774
VERSION     WP_258081774.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 885)
  AUTHORS   Studholme,D.J. and Dixon,R.
  TITLE     Domain architectures of sigma54-dependent transcriptional
            activators
  JOURNAL   J Bacteriol 185 (6), 1757-1767 (2003)
   PUBMED   12618438
REFERENCE   2  (residues 1 to 885)
  AUTHORS   Chaney,M., Grande,R., Wigneshweraraj,S.R., Cannon,W., Casaz,P.,
            Gallegos,M.T., Schumacher,J., Jones,S., Elderkin,S., Dago,A.E.,
            Morett,E. and Buck,M.
  TITLE     Binding of transcriptional activators to sigma 54 in the presence
            of the transition state analog ADP-aluminum fluoride: insights into
            activator mechanochemical action
  JOURNAL   Genes Dev 15 (17), 2282-2294 (2001)
   PUBMED   11544185
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00158.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..885
                     /product="sigma 54-interacting transcriptional regulator"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008134 - transcription factor binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=100170
     Region          4..787
                     /region_name="PspF"
                     /note="Transcriptional regulators containing an AAA-type
                     ATPase domain and a DNA-binding domain [Transcription,
                     Signal transduction mechanisms]; COG1221"
                     /db_xref="CDD:440834"
     Region          798..884
                     /region_name="PRD"
                     /note="PRD domain; pfam00874"
                     /db_xref="CDD:459973"
ORIGIN      
        1 msleldilrn nassdlnklm rqdkllklsg kptrflckki lcqrlnlryi geteinsiqe
       61 lmkdnysskk ihpfdsliga nkslqpviql aeaainyppr glhmmifges gtgksllaek
      121 ifdygkqeni fnekanfsvl ncadyasnpq lllshlfgnv kgaytgadad rvglieaang
      181 gilfldevhr lppegqemlf qfidknqfyk lgdsvnkrya stllitatte ppnsalletf
      241 krripvmiql pnfqersiae rldlisflyn ketekigsqi ivqpdaiqal laytplgnig
      301 qlksdiqlsv arallekkkn nskevlitqd ffpptvlssl ikinladkke ietivgvkpf
      361 ifdttldedr ktiasydfvn fftknysnsp rsitqafndy sqeiakerlr ndhftfllnd
      421 diksivllis dilyntlgii ldknvstafa lyihshtqqn diffsqiktt eklpanvmqv
      481 trkivkqleq kkkiifsqne ihslslivss ivenktnskn vsilvcahge rvaseiahtv
      541 nsllskeiiv pvdmplhstp kqtydaikkt iadfesteii ifadmgslvn fesnlrketq
      601 ksifiierid tliileaakn teflsmglqs tinnildidn rrntllnnki vskfnkrksk
      661 iiytvcqtge gtarfleeni ksllkelkif dvdvqsisgh ngtsiretml rskdieiiai
      721 vgtvnpkisy apfvsleeiv lhdgldkvlc hltteeqqsk kgsnhsftrn ivfdmgieav
      781 dkylyllagn kiqkslmdfi eelectfhkk ftysillkll ihtacliert linghelkii
      841 seddtrpshe pifhvkkafk nietefgitv sydecffiyd iiask
//
LOCUS       WP_258081777             152 aa            linear   BCT 02-MAR-2025
DEFINITION  glyceraldehyde 3-phosphate dehydrogenase NAD-binding
            domain-containing protein, partial [Enterococcus faecium].
ACCESSION   WP_258081777
VERSION     WP_258081777.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 152)
  AUTHORS   Kim,H., Feil,I.K., Verlinde,C.L., Petra,P.H. and Hol,W.G.
  TITLE     Crystal structure of glycosomal glyceraldehyde-3-phosphate
            dehydrogenase from Leishmania mexicana: implications for
            structure-based drug design and a new position for the inorganic
            phosphate binding site
  JOURNAL   Biochemistry 34 (46), 14975-14986 (1995)
   PUBMED   7578111
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012274.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00044.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..>152
                     /product="glyceraldehyde 3-phosphate dehydrogenase
                     NAD-binding domain-containing protein"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
     Region          1..>152
                     /region_name="GapA"
                     /note="Glyceraldehyde-3-phosphate
                     dehydrogenase/erythrose-4-phosphate dehydrogenase
                     [Carbohydrate transport and metabolism]; COG0057"
                     /db_xref="CDD:439827"
ORIGIN      
        1 mtvkvgingf grigrlafrr iqdvdgievv aindltdakm lahllkydtt qgrfngtvev
       61 hegsfnvngk evkvlanrnp eelpwgelgv divlectgff tsksaaekhl tagakrvvis
      121 apggndvpti vyntnhetlt gketvisgas ct
//
LOCUS       WP_258081779             223 aa            linear   BCT 02-MAR-2025
DEFINITION  Gfo/Idh/MocA family oxidoreductase, partial [Enterococcus faecium].
ACCESSION   WP_258081779
VERSION     WP_258081779.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 223)
  AUTHORS   Kingston,R.L., Scopes,R.K. and Baker,E.N.
  TITLE     The structure of glucose-fructose oxidoreductase from Zymomonas
            mobilis: an osmoprotective periplasmic enzyme containing
            non-dissociable NADP
  JOURNAL   Structure 4 (12), 1413-1428 (1996)
   PUBMED   8994968
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014893.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02894.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..223
                     /product="Gfo/Idh/MocA family oxidoreductase"
     Region          <1..212
                     /region_name="PRK10206"
                     /note="putative oxidoreductase; Provisional"
                     /db_xref="CDD:182305"
ORIGIN      
        1 rrfdsdfltv qkviesgklg dilevemhyd yfrpevpent hefstansyl yghachtvdq
       61 vlsyfgepdd isydvrqllg kgrmndyfdl dffygnmkis ikssyfrike rpsfvvygkk
      121 gmfvkqtkdr qeehlkmfym pdhedfgidl pehygvltyi deqgsyheek visevgdysr
      181 vyegiyetlv ngaekvikde etilqmkile egiksiqese gki
//
LOCUS       WP_258081781             156 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Enterococcus
            faecium].
ACCESSION   WP_258081781
VERSION     WP_258081781.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..>156
                     /product="ABC transporter substrate-binding protein"
     Region          1..>21
                     /region_name="LPAM_2"
                     /note="Prokaryotic lipoprotein-attachment site; cl26118"
                     /db_xref="CDD:474765"
     Region          57..>156
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mkktifgfaa lmsavvlaac ggggtdtsgn nsggngnnke eltfpiatkn nddaiedgel
       61 eaavatdsqf kglfqwefyq dsydaafmap sheplfandd dfritddgaa tldldedtkk
      121 atikvkdnvk wsdgedvtad dvifpyeiig nkdytg
//
LOCUS       WP_258081783             228 aa            linear   BCT 02-MAR-2025
DEFINITION  PHP domain-containing protein, partial [Enterococcus faecium].
ACCESSION   WP_258081783
VERSION     WP_258081783.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 228)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014826.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02811.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..228
                     /product="PHP domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          4..216
                     /region_name="PHP"
                     /note="Polymerase and Histidinol Phosphatase domain;
                     cl23724"
                     /db_xref="CDD:451507"
ORIGIN      
        1 skytehfdla npvtkvddip dyemysqtid slnkrfgnrv lkgieigyia sekdriidyl
       61 adkdydlkll svhhngqfdy lddevkdmdp aivipqyfaq lsealvviea dvfahfdygf
      121 rvfglsvaef kqyeaqflpi ldqviknkla felnaksayl ydnlalyeyv idlylsrggt
      181 lfsvgsdghy lehfrfhfdd lfallkakgv telaiyqkrk rimvplpv
//
LOCUS       WP_258081802              81 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Enterococcus faecium].
ACCESSION   WP_258081802
VERSION     WP_258081802.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 81)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 81)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 81)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 81)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..81
                     /product="ATP-binding protein"
     Region          <3..80
                     /region_name="KdpD"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; COG2205"
                     /db_xref="CDD:441807"
ORIGIN      
        1 tfskedsfir ltvanpikpg aqtsvekvfq rfytentsrt ntessgigly lskklvegmg
       61 gemtarldgg ifsisvklrr v
//
LOCUS       WP_258081809             122 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein, partial [Enterococcus faecium].
ACCESSION   WP_258081809
VERSION     WP_258081809.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 122)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 122)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 122)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 122)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..>122
                     /product="ATP-binding protein"
     Region          16..122
                     /region_name="HATPase"
                     /note="Histidine kinase-like ATPase domain; cl00075"
                     /db_xref="CDD:469604"
     Site            order(27,31,34,57,59,61,63,91..94,110,112,117..118,120)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340391"
     Site            order(73,94)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340391"
ORIGIN      
        1 kniryeivge dhtvltdakw iafifnqlls naikytpdhg niivsiekea qgvslsvkds
       61 gigipaedlk rifdkgftgr ngrlskthst glglylaknl aeklgihlta estegigttm
      121 tl
//
LOCUS       WP_258081820            1221 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein
            [Pseudomonas aeruginosa].
ACCESSION   WP_258081820
VERSION     WP_258081820.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 1221)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1221
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..1221
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=135959
     Region          53..1181
                     /region_name="PRK09959"
                     /note="acid-sensing system histidine kinase EvgS"
                     /db_xref="CDD:182169"
ORIGIN      
        1 mawfatrfln gtvvvlglll fmisfggava spsldetlpl klvdrsdfeg fevnlpnkdw
       61 qwlrnkrvlt lgvappdlap ieivsnntyy egftadvvgi iskllhievr viqfssreka
      121 lnalelglvd mvsrasnhel eahqvqlsqp ylpdrpllya rrsdnrsipv gldsmrvala
      181 edylplsqlk glypdavfvs yksheqalaa lafgnidlyl gdtvssnylv nlnffnyvrl
      241 yksldipvgg aafairsdne slvdvlnvvl kvvrenflqd mlkrwsggis plsstklals
      301 paeqrwikrh pvvryvvsnd ipmsyfdseg rfsgisaell raisvstglv fkpvrvgeld
      361 dhlkfiengk adltamtptv vreeilrftr piiftpfaii trneaaqpas vadlygkrla
      421 lpsthslrel lqpasnfhfv evktlfdamt mvaegradat atllpvaqhy imtqndgrlk
      481 isniiegara tlafamrkgd telasildka llqippdeid iyqnrwrpka dasngtwldy
      541 rgliykvgga afisivfsfv wniyirslys rrkkaerals eqlnfmrsli ngtphpiyir
      601 dwqgrmlacn ssyleafett eeavigrttl dsakldrkea lrahddyirv mklgepmkld
      661 rvlhiagrel siyhwvypyy ddsgkvkgvi cgwidisdrr elmeelrtal daadqssrak
      721 ttflatmshe irtpmsavig mlelamkrad qgsfdrsaie iaydsacgll eligdildvv
      781 riesghvsls prranlrelv esiarvfdgl arqkaltlsl hidasvnrdv lvdplrfkqv
      841 lsnlvgnaik ftdrgsvkvt ingsliener lrvqlsvedt gigicadelv nlfqpfmqas
      901 hggasrggag lglaiskslc elmggkmavr sevgkgtcma ldipfnilpe apsvatikee
      961 egekehlplr vlvvddhqan rvllmqqlvf fgqvvicaen geeglrrwke ekvdmvitdc
     1021 nmpvmhgyem tkrireleqq sgrsrcviig ftanaqpeek akclqmgmdd clfkpvsiaa
     1081 lsellksfsg maprgmlevp senitgdaie tilypltggd kammqslmve aynsytrdla
     1141 elkehlehiv pdtladlvhr ikgaarilqa qrvieacaqv egmcseiple reallqqvrv
     1201 vekeleslie qvrgisfade l
//
LOCUS       WP_258081821             705 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258081821
VERSION     WP_258081821.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039533.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19077.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..>705
                     /product="Ig-like domain-containing protein"
     Region          <201..701
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 mnvsvsvvdg ksitavkelv kvaagkpvri kaipggkyvl aegdqgfape nitlkrvgkn
       61 lhvalegtdp dqpeliienf yeyegqlvgm aedatyheyv avdgdsdsda aflidgatsa
      121 qalgtaelvg fgdglamlag sgfptaalgl gvlgllgaga aiadggggsk nrpapqvkpp
      181 vapeigevid nvgdqqgviq pgqstddntp tftgtgepgs tievidngkv igqvvvgddg
      241 nwtftpeqpl sdgghiitvr pgggsesgsi eiivdtkapg qvliagvtdd fgpktgpvah
      301 qgqtddntpt lnghaepgsq vsiydhgqll gttkadangq wvftpaalad gehrftatat
      361 daagniglps eiyvvtiktd gplrpeigai tdnegpivge ldnpavtddr tptlsgsgep
      421 gdtvtvidng qvigqvmvde sgkweftpnp leegkhnfev vvtdpsgnss qpseawpvlv
      481 dttapakpgt ggdgyglgdi lddvgeiqgs iapgsttddt qptlvgtgep gdtvtvldng
      541 kvigsvvvgg sgkwsftpse plvegqhdfs viftdpagnn seasdpwpii idasapekpa
      601 ieeaiddigs iqgpigngqv tddnkptlng sgeagstvti tdnglvigev vvdesgkwtf
      661 tpgqaledge hqfevvvtdp agnvsepsda yvvvvdtsap skpsi
//
LOCUS       WP_258081831             388 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5694 domain-containing protein [Xanthomonas arboricola].
ACCESSION   WP_258081831
VERSION     WP_258081831.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039197.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18950.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..388
                     /product="DUF5694 domain-containing protein"
                     /calculated_mol_wt=42027
     Region          220..383
                     /region_name="DUF5694"
                     /note="Family of unknown function (DUF5694); pfam18950"
                     /db_xref="CDD:465929"
ORIGIN      
        1 mqpslpriah naraagrffd agsasarrlq rpahrwlwla liapciaqaq vdlsqldaem
       61 aaprtqvlvl gsvhlsqlpk gsdigaarlq plmdrlaaya ptiittedls getcdlmrrh
      121 pavylpedtt tycpdtseaa ratgldvpta lgqvrvalrs lpsaptpaqr rhlaalflas
      181 geppsalvqw lqlapaeqrs gdgldaalva rlrrmeqrpn esyqiaarla arlglqrvhp
      241 addhtgdnve lgdpaaygka iqaawdkaap rasamrered qlasqgklle lyrainlpas
      301 qqlaiavdfr aalsegspqr ygyrymsgwe irnlrmvsnv rasfadqpga rvlavvgamh
      361 kpwfdnwlgq lqgvdivdaa qvlgadek
//
LOCUS       WP_258081935             140 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-binding dehydrogenase [Xanthomonas arboricola].
ACCESSION   WP_258081935
VERSION     WP_258081935.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024989.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13602.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..140
                     /product="zinc-binding dehydrogenase"
                     /calculated_mol_wt=14500
     Region          <2..136
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
ORIGIN      
        1 mvaiasgrhe afvrelgadv fidytrvtpe daiseadlvv davggpatgr flqtlkrgga
       61 lfpifplgfd grqaagtlgv svsttqvrss gaqlaalapl lqsgvvrvai dssfdlsqar
      121 qaheraaqgh iqgkivmtve
//
LOCUS       WP_258081859             708 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin acylase family protein [Xanthomonas arboricola].
ACCESSION   WP_258081859
VERSION     WP_258081859.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 708)
  AUTHORS   Verhaert,R.M., Riemens,A.M., van der Laan,J.M., van Duin,J. and
            Quax,W.J.
  TITLE     Molecular cloning and analysis of the gene encoding the
            thermostable penicillin G acylase from Alcaligenes faecalis
  JOURNAL   Appl Environ Microbiol 63 (9), 3412-3418 (1997)
   PUBMED   9292993
REFERENCE   2  (residues 1 to 708)
  AUTHORS   Duggleby,H.J., Tolley,S.P., Hill,C.P., Dodson,E.J., Dodson,G. and
            Moody,P.C.
  TITLE     Penicillin acylase has a single-amino-acid catalytic centre
  JOURNAL   Nature 373 (6511), 264-268 (1995)
   PUBMED   7816145
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013927.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01804.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..708
                     /product="penicillin acylase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /GO_process="GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=78151
     Region          40..692
                     /region_name="Ntn_hydrolase"
                     /note="The Ntn hydrolases (N-terminal nucleophile) are a
                     diverse superfamily of of enzymes that are activated
                     autocatalytically via an N-terminally lcated nucleophilic
                     amino acid. N-terminal nucleophile (NTN-) hydrolase
                     superfamily, which contains a...; cl00467"
                     /db_xref="CDD:469781"
     Site            order(190,210,212,246)
                     /site_type="active"
                     /db_xref="CDD:238911"
ORIGIN      
        1 mprlssmraq arsaslcagl lialfcapqa agagkdsdei lwdrygvphi yarteagtfy
       61 gfgwaqthsh gnlllhlyge argraaeywg ekyaeqdrwl asndvypraq qwyrqqtpaf
      121 radldafaqg indyaaahpq aldaevkvvl pitgvdvvah ahrlmnyvyi aspakvlgep
      181 pkdgqardgs nawalmpskt rdghamllan phlpwgsgff tyyeahlngp gvdlygatqv
      241 glpilrfgfn kqlgftntvn tllgqttykl tlsgegylld gkllpfkret rtlkirqadg
      301 alkeqtlqvr qsvhgpvfqr ydgstvalrv agldrpdmlk qywdmgkaqd faqfqralkq
      361 lqvpmfnivy adnagnvlfl dngilpkhaq gdlkywsglv pgdtastlwr dvhsydelpk
      421 vinpaggfvq ntndppwlas wprvldpkkf payvaptgpm slraqnsvkm laehdsidfd
      481 qlvalkrtaq alaadrtlpq lyaaaadstd pdilaavkvl kawdrhfetd srgallfeew
      541 arlftgdary lsqagyatpw sldaplttps glkdpalalr qlkqavastr qaygaidrpy
      601 gevsrfhlgd vdvpgrggfg nlgafdvitw nppnadgqrl pqhgetwvsl vefstpikak
      661 glmsygnasq pgsahindql qllsrgefrt lwttreqveq hlesrtdf
//
LOCUS       WP_258081851            1499 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 99-like domain-containing protein
            [Xanthomonas arboricola].
ACCESSION   WP_258081851
VERSION     WP_258081851.1
KEYWORDS    RefSeq.
SOURCE      Xanthomonas arboricola
  ORGANISM  Xanthomonas arboricola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (residues 1 to 1499)
  AUTHORS   Feng,L., Senchenkova,S.N., Wang,W., Shashkov,A.S., Liu,B.,
            Shevelev,S.D., Liu,D., Knirel,Y.A. and Wang,L.
  TITLE     Structural and genetic characterization of the Shigella boydii type
            18 O antigen
  JOURNAL   Gene 355, 79-86 (2005)
   PUBMED   16055280
REFERENCE   2  (residues 1 to 1499)
  AUTHORS   Tao,J., Feng,L., Guo,H., Li,Y. and Wang,L.
  TITLE     The O-antigen gene cluster of Shigella boydii O11 and functional
            identification of its wzy gene
  JOURNAL   FEMS Microbiol Lett 234 (1), 125-132 (2004)
   PUBMED   15109730
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025665.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14307.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1499
                     /organism="Xanthomonas arboricola"
                     /db_xref="taxon:56448"
     Protein         1..1499
                     /product="glycoside hydrolase family 99-like
                     domain-containing protein"
                     /calculated_mol_wt=168378
     Region          74..191
                     /region_name="UbiG"
                     /note="2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,
                     4-benzoquinol methylase [Coenzyme transport and
                     metabolism]; COG2227"
                     /db_xref="CDD:441829"
     Region          <589..>766
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          647..>899
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     Region          895..1239
                     /region_name="Glyco_tran_WbsX"
                     /note="Glycosyl hydrolase family 99-like domain of
                     WbsX-like glycosyltransferases; cd11579"
                     /db_xref="CDD:211420"
     Site            order(902,904,918,921,975,1004,1058,1108,1163,1213,
                     1215..1216)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:211420"
     Region          <1247..1464
                     /region_name="RgpF"
                     /note="Rhamnan synthesis protein F; pfam05045"
                     /db_xref="CDD:428278"
ORIGIN      
        1 msnpyvgian tymlsegvwl pkdqaeefgy sdgdeaeqrv aaaiagcddv slfsrslseh
       61 qidwpsryhl sasranllrp ladvlggrvl evgsgcgais rylgelgtkl valegsqrra
      121 rmtasrcrdl snvqvvndvl enfsaedefd avtligvley ariygkaadp aaawlrkahs
      181 lladdgvliv aienqlglky lagmpedhvg kamygisdny gkktvatfgr leltrmlqda
      241 gfehaefllp fpdykfpgav vlpagydgsy pqfdpsslas qsassdpqlp yaplfalera
      301 wtvigrngll admsnsflvv arkravpvak sgpvplalhf aservpvfck qvqfqsriss
      361 neievvrsrl aeddnversr pismrllpep flhgrihsqa leaivtrdsw taaevaewlg
      421 qwkdallhev evagdstgag mlpgwaldal prnlmqmedg syqfidlewv whgelelpyl
      481 iyraiigsft slvavgaped ishlhlptll rllmemmgap vgegdierfi dldgmvtrlv
      541 ygrdsglglk sfsnfnlrsl pdvgrmsrdw nslmsdtaqr isdisrhfqe gikdgqedgd
      601 alrkrqaqll aelainaeke qlkdaeirqh kaatedaekr remevealre slteklrlke
      661 leiqallaas aarerlkdae iqalagndql kdaeiqslme araernrale rnntilermf
      721 qlaeqarete vrlgrdliet kdalgiyeqs lrlaseraae ldrllastsw ritmplrvlr
      781 nmlrpqfvrq svgrslrriy ralpvseatr qsiksasfrl mpsvfgrtna yrnwlaarqp
      841 dqpqeivlsp asesvedsgd sflrrytqai lqlpkpsese yvgiaagidp ranaarviaf
      901 ylpqfhpfpe ndawwgrgft ewtnvskavp qfvghyqphl pgelgfydlr lidvmrrqae
      961 laklygiegf cfhyywfagk rlmerpldql lasdvdlpfc icwanenwtr rwdglendvl
     1021 iaqdysaedd safitelepl lrdsryirvd grplvilyrp sllpdagatl erwrqhcrev
     1081 gigelficmv qfdkldprey gfdaavefpp hkvaaglssi nheleivnpa fqgnvvdyad
     1141 vvssafaeak peydlirgvf pgwdndarkp gkgytvarst peryrtwlrg aidyarqhpv
     1201 rgdslvfvna wnewaegahl epdrrygyay leatrqalrr vptprtperv vviihafype
     1261 llpemlasls awtvpyrlvi stvsrnvqdv karladagmd advqvyenhg rdilpfletl
     1321 ktldaseslv lklhtkrslh redgeswrrd mldklldpyl aarnfdafrq qpelglsapd
     1381 ghilpmttyw ganadavhrl srqmhsdpvd paiamfaags mfyarieaiq siidleltre
     1441 dfepeagqvd gtlahaierc fsiatcssgy yiassntpft eaygsfktya yakptlhks
//
LOCUS       WP_258081993             110 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Pseudomonas syringae group genomosp. 3].
ACCESSION   WP_258081993
VERSION     WP_258081993.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae group genomosp. 3
  ORGANISM  Pseudomonas syringae group genomosp. 3
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 110)
  AUTHORS   Mullin,D.A., Zies,D.L., Mullin,A.H., Caballera,N. and Ely,B.
  TITLE     Genetic organization and transposition properties of IS511
  JOURNAL   Mol Gen Genet 254 (4), 456-463 (1997)
   PUBMED   9180700
REFERENCE   2  (residues 1 to 110)
  AUTHORS   Fischer,J., Maier,H., Viell,P. and Altenbuchner,J.
  TITLE     The use of an improved transposon mutagenesis system for DNA
            sequencing leads to the characterization of a new insertion
            sequence of Streptomyces lividans 66
  JOURNAL   Gene 180 (1-2), 81-89 (1996)
   PUBMED   8973350
REFERENCE   3  (residues 1 to 110)
  AUTHORS   Zekri,S. and Toro,N.
  TITLE     Identification and nucleotide sequence of Rhizobium meliloti
            insertion sequence ISRm6, a small transposable element that belongs
            to the IS3 family
  JOURNAL   Gene 175 (1-2), 43-48 (1996)
   PUBMED   8917074
  REMARK    Erratum:[Gene 1997 Mar 25;188(1):149]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01527.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Pseudomonas syringae group genomosp. 3"
                     /db_xref="taxon:251701"
     Protein         1..>110
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          51..>110
                     /region_name="transpos_IS3"
                     /note="IS3 family transposase; NF033516"
                     /db_xref="CDD:468052"
ORIGIN      
        1 mllpplnlsm aevsrregvs emslsnwrkq lssegsavse nkplaenwsa etkfavvlea
       61 aglseidlge ycrrkglype qitawrqafv agqksdkaqq kedreqarkd
//
LOCUS       WP_258082022             135 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Pseudomonas syringae group genomosp. 3].
ACCESSION   WP_258082022
VERSION     WP_258082022.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae group genomosp. 3
  ORGANISM  Pseudomonas syringae group genomosp. 3
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 135)
  AUTHORS   Mullin,D.A., Zies,D.L., Mullin,A.H., Caballera,N. and Ely,B.
  TITLE     Genetic organization and transposition properties of IS511
  JOURNAL   Mol Gen Genet 254 (4), 456-463 (1997)
   PUBMED   9180700
REFERENCE   2  (residues 1 to 135)
  AUTHORS   Fischer,J., Maier,H., Viell,P. and Altenbuchner,J.
  TITLE     The use of an improved transposon mutagenesis system for DNA
            sequencing leads to the characterization of a new insertion
            sequence of Streptomyces lividans 66
  JOURNAL   Gene 180 (1-2), 81-89 (1996)
   PUBMED   8973350
REFERENCE   3  (residues 1 to 135)
  AUTHORS   Zekri,S. and Toro,N.
  TITLE     Identification and nucleotide sequence of Rhizobium meliloti
            insertion sequence ISRm6, a small transposable element that belongs
            to the IS3 family
  JOURNAL   Gene 175 (1-2), 43-48 (1996)
   PUBMED   8917074
  REMARK    Erratum:[Gene 1997 Mar 25;188(1):149]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01527.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Pseudomonas syringae group genomosp. 3"
                     /db_xref="taxon:251701"
     Protein         1..>135
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          4..>56
                     /region_name="InsE"
                     /note="Transposase InsE and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2963"
                     /db_xref="CDD:442203"
     Region          65..>135
                     /region_name="transpos_IS3"
                     /note="IS3 family transposase; NF033516"
                     /db_xref="CDD:468052"
ORIGIN      
        1 mpyysperra allkmllppl nlsmaevsrr egvsemslsn wrkqlssegs avsenkplae
       61 nwsaetkfav vleaaglsei dlgeycrrkg lypeqitawr qafvagqksd kaqqkedreq
      121 arkdkkriqe lerel
//
LOCUS       WP_258082024             963 aa            linear   BCT 02-MAR-2025
DEFINITION  Tc toxin subunit A [Pseudomonas syringae group genomosp. 3].
ACCESSION   WP_258082024
VERSION     WP_258082024.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae group genomosp. 3
  ORGANISM  Pseudomonas syringae group genomosp. 3
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015501.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03538.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Pseudomonas syringae group genomosp. 3"
                     /db_xref="taxon:251701"
     Protein         1..963
                     /product="Tc toxin subunit A"
                     /calculated_mol_wt=107423
     Region          32..347
                     /region_name="VRP1"
                     /note="Salmonella virulence plasmid 28.1kDa A protein;
                     cl21676"
                     /db_xref="CDD:451351"
ORIGIN      
        1 mttgepdmte hpfsllrnla rsgndthehd ddtlsfinam eklnihsvfd ivrrsksafv
       61 helsrisdad aalayenarc yatqivrlyr nqllssgrtq qltrrtgvrs lvdigpgfpn
      121 lfkenwdlfc kvgaieakds pvayltslyr faleqlegsv aepsriklde rrpdlkdlli
      181 dqqstftpvp tlhivnqvls kainayvgtv pedkgktiyq lvaekqhpfq fpynfhfqqi
      241 slgldgkkpt lgelsyrvsl evpttsrygs dygkvqhssa iaqvlmsgag peqqaivlep
      301 alssqanadt sadltrqffk tkynvdyvdd asnplnnlnv flektgldsd gveallaign
      361 htayaspnil saghtadeds prearltaik arfgagyvng pttqpamaln kdaygikrlv
      421 ntsvdrfdrl qrmirlqrwt gipftaldtl vmavvrsega vnpqmvltvn tlralgtyry
      481 lnkryglapd efaafvhqmp geandgrlpm fdrvfnnpal fdtplvldgs tlyldqhssq
      541 hvkaraqlsr alhlsstheg lrqlaidvre lignaptdfr lnvsmissly rqariasmfg
      601 lttaecrali dllgslsfrk kvvsgqlddt epdvldilmq ldwavtwlea sdrdvatlrr
      661 qtgwdmteti vtqeltvqle qltndarlav lkgdqlasld lpskddqnnt lnwwailyyh
      721 lidgfglvtt qpldeepavs irrtlherls siaiaeplas evearletfv lngyrnqhrl
      781 veellltltg lppdrcepvi rwagsdvskf laallrdngv iqtlstliry sevsqqlgls
      841 aralrtflin prwlyagseg qfylspnsly lldrysnwrd ncgypeeall eyfkqandpq
      901 rdatqcaarl asltgwtsse vlaanalltg sdriassmhe vdwlsrmhsa scqrqlksdp
      961 lpc
//
LOCUS       WP_258082028             150 aa            linear   BCT 02-MAR-2025
DEFINITION  cysteine peptidase family C39 domain-containing protein
            [Pseudomonas syringae group genomosp. 3].
ACCESSION   WP_258082028
VERSION     WP_258082028.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae group genomosp. 3
  ORGANISM  Pseudomonas syringae group genomosp. 3
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 150)
  AUTHORS   Havarstein,L.S., Diep,D.B. and Nes,I.F.
  TITLE     A family of bacteriocin ABC transporters carry out proteolytic
            processing of their substrates concomitant with export
  JOURNAL   Mol Microbiol 16 (2), 229-240 (1995)
   PUBMED   7565085
REFERENCE   2  (residues 1 to 150)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015377.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03412.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Pseudomonas syringae group genomosp. 3"
                     /db_xref="taxon:251701"
     Protein         1..150
                     /product="cysteine peptidase family C39 domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=16004
     Region          13..133
                     /region_name="Peptidase_C39_likeA"
                     /note="A sub-family of peptidase C39 which contains
                     Cyclolysin and Hemolysin processing peptidases. Peptidase
                     family C39 mostly contains bacteriocin-processing
                     endopeptidases from bacteria. The cysteine peptidases in
                     family C39 cleave the 'double-glycine'...; cd02417"
                     /db_xref="CDD:239098"
ORIGIN      
        1 mndseigtqa penapridtg laslvmlarf hqvaaspeql ahefgspdqs lsqdslllaa
       61 rklglkakaa kttterldrt plpaiaadnn ggffiiarld qgkalihdpl aqrpevvtfe
      121 alqarwtgql llirseagtp gessrealqk
//
LOCUS       WP_258082032             101 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Pseudomonas syringae group genomosp. 3].
ACCESSION   WP_258082032
VERSION     WP_258082032.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae group genomosp. 3
  ORGANISM  Pseudomonas syringae group genomosp. 3
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 101)
  AUTHORS   Mullin,D.A., Zies,D.L., Mullin,A.H., Caballera,N. and Ely,B.
  TITLE     Genetic organization and transposition properties of IS511
  JOURNAL   Mol Gen Genet 254 (4), 456-463 (1997)
   PUBMED   9180700
REFERENCE   2  (residues 1 to 101)
  AUTHORS   Fischer,J., Maier,H., Viell,P. and Altenbuchner,J.
  TITLE     The use of an improved transposon mutagenesis system for DNA
            sequencing leads to the characterization of a new insertion
            sequence of Streptomyces lividans 66
  JOURNAL   Gene 180 (1-2), 81-89 (1996)
   PUBMED   8973350
REFERENCE   3  (residues 1 to 101)
  AUTHORS   Zekri,S. and Toro,N.
  TITLE     Identification and nucleotide sequence of Rhizobium meliloti
            insertion sequence ISRm6, a small transposable element that belongs
            to the IS3 family
  JOURNAL   Gene 175 (1-2), 43-48 (1996)
   PUBMED   8917074
  REMARK    Erratum:[Gene 1997 Mar 25;188(1):149]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01527.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Pseudomonas syringae group genomosp. 3"
                     /db_xref="taxon:251701"
     Protein         1..>101
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          4..>56
                     /region_name="InsE"
                     /note="Transposase InsE and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2963"
                     /db_xref="CDD:442203"
ORIGIN      
        1 mpyysperra allkmllppl nlsmaevsrr egvsemslsn wrkqlssegs avsenkplae
       61 nwsaetkfav vleaaglsei dlgeycrrkg lypeqitawr q
//
LOCUS       WP_258082061              84 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Pseudomonas syringae group genomosp. 3].
ACCESSION   WP_258082061
VERSION     WP_258082061.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas syringae group genomosp. 3
  ORGANISM  Pseudomonas syringae group genomosp. 3
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 84)
  AUTHORS   Mullin,D.A., Zies,D.L., Mullin,A.H., Caballera,N. and Ely,B.
  TITLE     Genetic organization and transposition properties of IS511
  JOURNAL   Mol Gen Genet 254 (4), 456-463 (1997)
   PUBMED   9180700
REFERENCE   2  (residues 1 to 84)
  AUTHORS   Fischer,J., Maier,H., Viell,P. and Altenbuchner,J.
  TITLE     The use of an improved transposon mutagenesis system for DNA
            sequencing leads to the characterization of a new insertion
            sequence of Streptomyces lividans 66
  JOURNAL   Gene 180 (1-2), 81-89 (1996)
   PUBMED   8973350
REFERENCE   3  (residues 1 to 84)
  AUTHORS   Zekri,S. and Toro,N.
  TITLE     Identification and nucleotide sequence of Rhizobium meliloti
            insertion sequence ISRm6, a small transposable element that belongs
            to the IS3 family
  JOURNAL   Gene 175 (1-2), 43-48 (1996)
   PUBMED   8917074
  REMARK    Erratum:[Gene 1997 Mar 25;188(1):149]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01527.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Pseudomonas syringae group genomosp. 3"
                     /db_xref="taxon:251701"
     Protein         1..>84
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          4..>56
                     /region_name="InsE"
                     /note="Transposase InsE and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2963"
                     /db_xref="CDD:442203"
ORIGIN      
        1 mpyysperra allkmllppl nlsmaevsrr egvsemslsn wrkqlssegs avsenkplae
       61 nwsaetkfav vleaaglsei ylge
//
LOCUS       WP_258082088             819 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258082088
VERSION     WP_258082088.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>819
                     /product="Ig-like domain-containing protein"
     Region          <1..48
                     /region_name="Big_6"
                     /note="Bacterial Ig domain; pfam17936"
                     /db_xref="CDD:465576"
     Region          52..130
                     /region_name="Big_6"
                     /note="Bacterial Ig domain; pfam17936"
                     /db_xref="CDD:465576"
     Region          <130..564
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
     Region          <376..810
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 gnpiaevtad gsgnwtytps tpiangtvvn vvaqdaagns sppatvtvds sappapvinp
       61 sngvvisgta eagatvtltd aggnpigqvt adgsgnwsft pgtplangtv ivatatdptg
      121 ntgpqaattv davappapvi dpsngttisg taeagakvil tdgngnpige ttadgsgnws
      181 ftpgtplang tvvnavaqdp agntgpqgst tvdavapntp vvnpsngnll ngtaepgstv
      241 tltdgngnpi gqttadgsgn wsftpgsqlp ngtvvnvtas daagntslpa tttvdsslps
      301 ipqvdpsngs visgtadagn tiiitdgngn pigqvtadgs gnwsftpgip lpdgtvvnvv
      361 arspsnvdsa pavitvdgva paapvidpsn gteisgtaea gatviltdgg gnpigqatad
      421 gsgnwtftps tplangtvin avaqdpagnt sgpasvtvda iappapvidp sngvvisgta
      481 eagatviltd gngnpigqvt adgsgnwsft pgtplangsv inalaqdaag ntsgpasttv
      541 dsvapatpvl dpsngtvisg taeagatvil tdgngnpigq vtadgsgnws ftpgtplang
      601 tvvnavaqda agntsgpast tvdsvapaap vidpsngsvi agtaeagatv iltdgggnpi
      661 gqatadgsgn wtftpstpla ngtvinavaq dpagntsgpa svtvdaiapp apvidpsngv
      721 visgtaeaga tviltdgngn pigqvtadgs gnwsftpgtp langsvinal aqdaagntsg
      781 pasttvdsva patpvldpsn gtvisgtaea gatviltdg
//
LOCUS       WP_258082096             263 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein,
            partial [Pseudomonas aeruginosa].
ACCESSION   WP_258082096
VERSION     WP_258082096.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 263)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>263
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
     Region          <1..263
                     /region_name="mrcA"
                     /note="penicillin-binding protein 1a; Provisional;
                     PRK11636"
                     /db_xref="CDD:183248"
ORIGIN      
        1 qglgqsknvv mvramramgv dyaaeylqrf gfpaqnivrt eslalgsasf tplqvargys
       61 vmanggflid pyfiskiend qggvlfeakp kiacpdcdip viygntpksd vlenkdmedp
      121 avsqeqqngv vpqpqleqan qslvaqtgap eyaphvintp lsfliksaln tnifgepgwq
      181 gtgwragrdl qrhdiggktg ttnsskdawf sgygpgvvts vwigfddhrr dlgrttasga
      241 ikdqisgyeg gaksaqpawd aym
//
LOCUS       WP_258082107             209 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein,
            partial [Pseudomonas aeruginosa].
ACCESSION   WP_258082107
VERSION     WP_258082107.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (residues 1 to 209)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>209
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
     Region          <1..209
                     /region_name="mrcB"
                     /note="bifunctional glycosyl transferase/transpeptidase;
                     Reviewed; PRK09506"
                     /db_xref="CDD:236544"
ORIGIN      
        1 aepqfagynr amqarrsigs lakpatylta lsqpnqyrln twiadapisl rqpngqvwsp
       61 qnddkqfsgq vmlvdaltrs mnvptvnlgm slglpaivdt wqklgvskeq lhpvpamilg
      121 alnltpieva qafqtiasgg nraplsalrs viaedgsvly qsfpqaerav paqaaymtlw
      181 tmqqvvqrgt grqlgakypg lhlagktgt
//
LOCUS       WP_258082108             207 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein, partial [Pseudomonas
            aeruginosa].
ACCESSION   WP_258082108
VERSION     WP_258082108.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         <1..>207
                     /product="ABC transporter substrate-binding protein"
     Region          <1..207
                     /region_name="PRK15413"
                     /note="glutathione ABC transporter substrate-binding
                     protein GsiB; Provisional"
                     /db_xref="CDD:185311"
ORIGIN      
        1 psimqryism nvtqkpfdnp kvreainyai nrqalvkvaf agyatpatgv lppaiayaqs
       61 yqpwpydpak arellkeagf pngfsttlws shnhstaqkv lqftqqqlaq vgikvqvtam
      121 dagqraaeve gkgqkesgvr mfytgwsast geadwalspl fasqnwpptl fntafysnpq
      181 vdkdladalk ttkpeekarl ykdaqdi
//
LOCUS       WP_258082133             692 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Enterococcus faecium].
ACCESSION   WP_258082133
VERSION     WP_258082133.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037006.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17936.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..>692
                     /product="Ig-like domain-containing protein"
     Region          98..202
                     /region_name="Pectate_lyase_5"
                     /note="Putative pectate lyase-like adhesive domain;
                     pfam20585"
                     /db_xref="CDD:466734"
     Region          <464..>660
                     /region_name="Ig_like_BLP2"
                     /note="Ig-like repeat protein Blp2; NF040520"
                     /db_xref="CDD:468522"
ORIGIN      
        1 mfaneqstqe ssissaeaka dlekgmavsg vensteakqe tqntektsen seddkisipe
       61 tardskeatk sstqdtssel peglrnakst rlsdgrisvd istfeeltaa fntplvgqvn
      121 ltndivftrs itpgnisnrn lvidgknhti nfsnyyidnd eygyftiknl htinggdgna
      181 tsgvfdlana dvtienvthk gnewlnarni elignidvtv egtgngytni lsvywtrngs
      241 itvksgatvn ltqntqygyg aivlphcdaf tiednatvsv ktttplgygv lgnikngmpi
      301 nigsgsklni estspstrgi ngnlgsinis kggelnvkta sdyaiaatyn natinlsgak
      361 fniqstksng lplymgsggs isfdkqnvra wlkgfatatd pqyswdnvtg vvnmsgantt
      421 salsnntefn alfknqnfsr issdgratqe ltkttinevk dtdttvsgkg epngkielkv
      481 gdqviasgtv gsdgnyslti pkqsagtvik avvsmdgqts eanttvvrta laqttisein
      541 tettqvsgkg epnapikimn gdqiiaqgvv gsdgnytlti prqakdsvik aivekdglts
      601 eaqttvkqgs laqttisein tettqvsgkg epnapikimn gdqiiaqgvi gsdgnytlti
      661 pkqakdsvik aivekdglts kaqttvtqgs lv
//
LOCUS       WP_258082162             149 aa            linear   BCT 02-MAR-2025
DEFINITION  FGGY family carbohydrate kinase, partial [Klebsiella pneumoniae].
ACCESSION   WP_258082162
VERSION     WP_258082162.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 149)
  AUTHORS   Ormo,M., Bystrom,C.E. and Remington,S.J.
  TITLE     Crystal structure of a complex of Escherichia coli glycerol kinase
            and an allosteric effector fructose 1,6-bisphosphate
  JOURNAL   Biochemistry 37 (47), 16565-16572 (1998)
   PUBMED   9843423
REFERENCE   2  (residues 1 to 149)
  AUTHORS   Hurley,J.H., Faber,H.R., Worthylake,D., Meadow,N.D., Roseman,S.,
            Pettigrew,D.W. and Remington,S.J.
  TITLE     Structure of the regulatory complex of Escherichia coli IIIGlc with
            glycerol kinase
  JOURNAL   Science 259 (5095), 673-677 (1993)
   PUBMED   8430315
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>149
                     /product="FGGY family carbohydrate kinase"
                     /GO_function="GO:0016301 - kinase activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          1..>149
                     /region_name="rhaB"
                     /note="rhamnulokinase; Provisional; PRK10640"
                     /db_xref="CDD:182609"
ORIGIN      
        1 slesairlgl nkvceegiri dsigidtwgv dfvlldqqgq rvglpvayra srtnglmaqa
       61 qqqlgkrdiy qrsgiqflpf ntlyqlralt eqqpeliphi ahallmpdyf syrltgkmnw
      121 eytnatttql vninsddwde sllawsgan
//
LOCUS       WP_258082239             273 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme, partial [Enterococcus
            faecium].
ACCESSION   WP_258082239
VERSION     WP_258082239.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 273)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..273
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
     Region          <1..214
                     /region_name="TPP_enzymes"
                     /note="Thiamine pyrophosphate (TPP) enzyme family,
                     TPP-binding module; found in many key metabolic enzymes
                     which use TPP (also known as thiamine diphosphate) as a
                     cofactor. These enzymes include, among others, the E1
                     components of the pyruvate, the acetoin and...; cl01629"
                     /db_xref="CDD:470272"
     Site            order(7..10,36,38)
                     /site_type="other"
                     /note="TPP-binding site [chemical binding]"
                     /db_xref="CDD:239472"
ORIGIN      
        1 sqwmiggdgw aydigfggid hvlasgadvn ilvldnevys ntggqtskat pasaiakfsa
       61 sgkyaskkdl gmmamtygnv yvaqiasgan qmqtikafee aekypgpsli iaytpcithg
      121 llggmkeslk eakeavssgy wslyrynpam veknkkpmtl dykkpdfstm pdfmrkqvrf
      181 sslenanpnl akalfektvq daktrfynya alsgelekik krlepeesid vvvktrkekt
      241 tdleaeerra arraaraerr kkmehvaeek sek
//
LOCUS       WP_258082184              89 aa            linear   BCT 02-MAR-2025
DEFINITION  PRD domain-containing protein [Enterococcus faecium].
ACCESSION   WP_258082184
VERSION     WP_258082184.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 89)
  AUTHORS   Graille,M., Zhou,C.Z., Receveur-Brechot,V., Collinet,B.,
            Declerck,N. and van Tilbeurgh,H.
  TITLE     Activation of the LicT transcriptional antiterminator involves a
            domain swing/lock mechanism provoking massive structural changes
  JOURNAL   J Biol Chem 280 (15), 14780-14789 (2005)
   PUBMED   15699035
REFERENCE   2  (residues 1 to 89)
  AUTHORS   Declerck,N., Dutartre,H., Receveur,V., Dubois,V., Royer,C.,
            Aymerich,S. and van Tilbeurgh,H.
  TITLE     Dimer stabilization upon activation of the transcriptional
            antiterminator LicT
  JOURNAL   J Mol Biol 314 (4), 671-681 (2001)
   PUBMED   11733988
REFERENCE   3  (residues 1 to 89)
  AUTHORS   van Tilbeurgh,H. and Declerck,N.
  TITLE     Structural insights into the regulation of bacterial signalling
            proteins containing PRDs
  JOURNAL   Curr Opin Struct Biol 11 (6), 685-693 (2001)
   PUBMED   11751049
REFERENCE   4  (residues 1 to 89)
  AUTHORS   van Tilbeurgh,H., Le Coq,D. and Declerck,N.
  TITLE     Crystal structure of an activated form of the PTS regulation domain
            from the LicT transcriptional antiterminator
  JOURNAL   EMBO J 20 (14), 3789-3799 (2001)
   PUBMED   11447120
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013070.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00874.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..89
                     /product="PRD domain-containing protein"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=10458
     Region          <1..86
                     /region_name="LevR"
                     /note="Transcriptional regulatory protein LevR, contains
                     PRD, AAA+ and EIIA domains [Transcription]; COG3933"
                     /db_xref="CDD:443134"
ORIGIN      
        1 mdfiqelect fhkkfthsil lkllihtacl iertlinghe lkiiseddtr pshetifhvk
       61 kafknietef ritvsydecf fiydiitsk
//
LOCUS       WP_258082247             385 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: helix-turn-helix domain-containing protein
            [Enterococcus].
ACCESSION   WP_258082247
VERSION     WP_258082247.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus
  ORGANISM  Enterococcus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae.
REFERENCE   1  (residues 1 to 385)
  AUTHORS   Kreikemeyer,B., Beckert,S., Braun-Kiewnick,A. and Podbielski,A.
  TITLE     Group A streptococcal RofA-type global regulators exhibit a
            strain-specific genomic presence and regulation pattern
  JOURNAL   Microbiology (Reading) 148 (Pt 5), 1501-1511 (2002)
   PUBMED   11988525
REFERENCE   2  (residues 1 to 385)
  AUTHORS   McIver,K.S. and Myles,R.L.
  TITLE     Two DNA-binding domains of Mga are required for virulence gene
            activation in the group A streptococcus
  JOURNAL   Mol Microbiol 43 (6), 1591-1601 (2002)
   PUBMED   11952907
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016901.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05043.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Enterococcus"
                     /db_xref="taxon:1350"
     Protein         1..385
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=46048
     Region          17..>231
                     /region_name="BglG"
                     /note="Transcriptional antiterminator [Transcription];
                     COG3711"
                     /db_xref="CDD:442925"
ORIGIN      
        1 mffnivftqk errklaifhl leeqheltik eiskkldlss svvknilnem enefndfcfs
       61 gfkllsknki nqnlpidlny dyyysyliqq slpyraikss lfypeknlme fcqenfisra
      121 samrhlqsla dyvqefdvif nrsqlsfkgd erlirlilfn ilwaasrgne dyafyvskse
      181 llkklaeltk htslnwsfvg kkevclfagi ttqriaqghy veddprysea vfsndhqikc
      241 lfgehfsila shqdsefrfa qfmvfyaptf qyenptlnea ldifdkkgql lssllreldn
      301 ywqteifpnd rvfqhnqivh lhlfnilfcy ylfpkrvptl fflmnyfykk ksssyyylke
      361 hftfflnkmg rrhnyqwlfl favti
//
LOCUS       WP_258082284             411 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerophosphodiester phosphodiesterase family protein
            [Enterococcus faecium].
ACCESSION   WP_258082284
VERSION     WP_258082284.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 411)
  AUTHORS   Kim,H. and Farrand,S.K.
  TITLE     Characterization of the acc operon from the nopaline-type Ti
            plasmid pTiC58, which encodes utilization of agrocinopines A and B
            and susceptibility to agrocin 84
  JOURNAL   J Bacteriol 179 (23), 7559-7572 (1997)
   PUBMED   9393724
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03009.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..411
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /GO_function="GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=45772
     Region          58..290
                     /region_name="PI-PLCc_GDPD_SF"
                     /note="Catalytic domain of phosphoinositide-specific
                     phospholipase C-like phosphodiesterases superfamily;
                     cl14615"
                     /db_xref="CDD:472694"
     Site            order(61,86,88,164,197,266)
                     /site_type="active"
                     /db_xref="CDD:176498"
     Site            order(61,101)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176498"
ORIGIN      
        1 mvnknlsdis adlnkqiann knniatnttn istnttaist lqnknlftqn ksthgltwia
       61 hrgnnstape nsivafenvy rhqaietdiq ltsdnrwvim hdetvdrttn gtgkisdmty
      121 dqfralridt ganvdkltdd ekippnleef llickknnri pvveikatgg ytkeqlqlik
      181 tisdgigmte ktifisfnyd mlvlmreifp fnelqwvyqg tintdvitkl ktlglpcgld
      241 inennasltk dnvnllhanr lkigawtvgy nsfekmkdlg idyittnsps gylkyaelsl
      301 lngftptndn gqvpqfaael eggyvflsfn vkdgtnnnql teiaklpdwa iphekqynqc
      361 mirtssgvsl atfdtqgwkh stgvtegtit iglgwssrtt waagqciyki d
//
LOCUS       WP_258082304             235 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Enterococcus faecium].
ACCESSION   WP_258082304
VERSION     WP_258082304.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 235)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..>235
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          2..>224
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 miatdsdreg eaiarliinl sgnsrktikr lwinsletse ikkgfqnlkd gqsfystyke
       61 aetrqiadwl vginltrlyt lymqkngmrg vfsvgrvqtp tlfliyqrne eikhfvsklf
      121 yelyatfths ngkykgkyke rfdtlenldg fketnqleqa enaevtnvkv eekrqyapkl
      181 fslsdlqsfa nkrfkysadk tlsiaqklye kkvlsyprsd tnyigspefd gsvak
//
LOCUS       WP_258082288             207 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-hairpin-helix domain-containing protein [Enterococcus
            faecium].
ACCESSION   WP_258082288
VERSION     WP_258082288.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 207)
  AUTHORS   Witte,G., Hartung,S., Buttner,K. and Hopfner,K.P.
  TITLE     Structural biochemistry of a bacterial checkpoint protein reveals
            diadenylate cyclase activity regulated by DNA recombination
            intermediates
  JOURNAL   Mol Cell 30 (2), 167-178 (2008)
   PUBMED   18439896
REFERENCE   2  (residues 1 to 207)
  AUTHORS   Doherty,A.J., Serpell,L.C. and Ponting,C.P.
  TITLE     The helix-hairpin-helix DNA-binding motif: a structural basis for
            non-sequence-specific recognition of DNA
  JOURNAL   Nucleic Acids Res 24 (13), 2488-2497 (1996)
   PUBMED   8692686
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12836.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..207
                     /product="helix-hairpin-helix domain-containing protein"
                     /calculated_mol_wt=22745
     Region          80..206
                     /region_name="comE"
                     /note="comEA protein; TIGR01259"
                     /db_xref="CDD:213597"
ORIGIN      
        1 mstvvlsfci vsgfllsnll fhrepeeiaa keilspfsss eenqlpegnt veedarpkvm
       61 ytdikgsvke pgiysfssee rvydvlkrag glleeadsdr infsakiedq qvlyipavge
      121 eppehlnqsa spegkqstad tepskinint aspselqqip gigsvkaqei irfreengsf
      181 qkvedlqeis gigektvekl knfvtik
//
LOCUS       WP_258082297             666 aa            linear   BCT 02-MAR-2025
DEFINITION  CAP domain-containing protein [Enterococcus faecium].
ACCESSION   WP_258082297
VERSION     WP_258082297.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 666)
  AUTHORS   Gibbs,G.M., Roelants,K. and O'Bryan,M.K.
  TITLE     The CAP superfamily: cysteine-rich secretory proteins, antigen 5,
            and pathogenesis-related 1 proteins--roles in reproduction, cancer,
            and immune defense
  JOURNAL   Endocr Rev 29 (7), 865-897 (2008)
   PUBMED   18824526
REFERENCE   2  (residues 1 to 666)
  AUTHORS   Milne,T.J., Abbenante,G., Tyndall,J.D., Halliday,J. and Lewis,R.J.
  TITLE     Isolation and characterization of a cone snail protease with
            homology to CRISP proteins of the pathogenesis-related protein
            superfamily
  JOURNAL   J Biol Chem 278 (33), 31105-31110 (2003)
   PUBMED   12759345
REFERENCE   3  (residues 1 to 666)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
REFERENCE   4  (residues 1 to 666)
  AUTHORS   Fernandez,C., Szyperski,T., Bruyere,T., Ramage,P., Mosinger,E. and
            Wuthrich,K.
  TITLE     NMR solution structure of the pathogenesis-related protein P14a
  JOURNAL   J Mol Biol 266 (3), 576-593 (1997)
   PUBMED   9067611
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012415.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00188.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..666
                     /product="CAP domain-containing protein"
                     /calculated_mol_wt=74675
     Region          16..54
                     /region_name="DUF5648"
                     /note="Repeat of unknown function (DUF5648); pfam18885"
                     /db_xref="CDD:436806"
     Region          62..100
                     /region_name="DUF5648"
                     /note="Repeat of unknown function (DUF5648); pfam18885"
                     /db_xref="CDD:436806"
     Region          108..148
                     /region_name="DUF5648"
                     /note="Repeat of unknown function (DUF5648); pfam18885"
                     /db_xref="CDD:436806"
     Region          166..219
                     /region_name="FIVAR"
                     /note="FIVAR domain; pfam07554"
                     /db_xref="CDD:400096"
     Region          237..290
                     /region_name="FIVAR"
                     /note="FIVAR domain; pfam07554"
                     /db_xref="CDD:400096"
     Region          534..644
                     /region_name="YkwD"
                     /note="Spore germination protein YkwD and related proteins
                     with CAP (CSP/antigen 5/PR1) domain [Cell cycle control,
                     cell division, chromosome partitioning, General function
                     prediction only]; COG2340"
                     /db_xref="CDD:441910"
ORIGIN      
        1 mtlpagsada astnvmyrly npnnhehfyt sstkerdhlv kikwgnyegp aweaptsggh
       61 lvyrlynkgl rdhhytaswd evkwltknyg wtyegpawrs aeknnkpiyr lflpgvksgs
      121 hhytaswkev qwltkdygwk yegigwygad tskpkvnksa lealytsvkg tkkgdytdnt
      181 wnafqtalnn ankvlndska tqkqvdsakn nldsaykglk kkpaptvnka elqalynrvk
      241 stakgdftee swndfqtals nakkvlddsk asqaqvnnak nsldaafkgl qhkpetpymv
      301 tinhidnqtg qviatdqaqv tsgstytaka kafkysegak dnfsykvign dtqsqtitgn
      361 ttitfnynqv hqinllcnnn yknegrvdil keqiinvthg esvtltapai qgyvlddrve
      421 ptnsvtlnnv tesqnyifny trkfnvtvnh vnadtnavls sesktvyegd sfstpwknmt
      481 dqnyflcrnd dpsisvdkng qrvinnvdqn rtitfkykni slsdlnnyvr qkelvwlnny
      541 rqqngaapmq fndivqqaad irakelqvsf shyrpgggtf qdlleslgcy gakgeninsf
      601 ylyvdeilsd tgavnamimw kdsaahnanl lynnqsivgl shayevsadg slssdnvfis
      661 anpifk
//
LOCUS       WP_258082333             219 aa            linear   BCT 02-MAR-2025
DEFINITION  CdaR family protein, partial [Enterococcus faecium].
ACCESSION   WP_258082333
VERSION     WP_258082333.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 219)
  AUTHORS   Meinnel,T. and Blanquet,S.
  TITLE     Characterization of the Thermus thermophilus locus encoding peptide
            deformylase and methionyl-tRNA(fMet) formyltransferase
  JOURNAL   J Bacteriol 176 (23), 7387-7390 (1994)
   PUBMED   7961514
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019561.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07949.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         <1..219
                     /product="CdaR family protein"
     Region          <4..>143
                     /region_name="YbbR"
                     /note="Cyclic di-AMP synthase regulator CdaR, YbbR domain
                     [Signal transduction mechanisms]; COG4856"
                     /db_xref="CDD:443884"
ORIGIN      
        1 tgdktlaeik rvvadvdasm vtddginsev piqalnaage vlsivsdpvq vtvradsikp
       61 sksvrlygiq qgtpaagves ydfsfsklea evsgssdlla sigdsiavpi nvsginhrtt
      121 rkieipveeg lsikpesvsv eitpvlqtss sssastssrt qentstsrsi ssadsgteps
      181 tttisssses gtsssttste etsetsestq msrtnssen
//
LOCUS       WP_258082334             442 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Enterococcus faecium].
ACCESSION   WP_258082334
VERSION     WP_258082334.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 442)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..442
                     /product="AMP-binding protein"
                     /calculated_mol_wt=50528
     Region          <98..440
                     /region_name="MenE/FadK"
                     /note="O-succinylbenzoic acid-CoA ligase MenE or related
                     acyl-CoA synthetase (AMP-forming) [Lipid transport and
                     metabolism]; COG0318"
                     /db_xref="CDD:440087"
ORIGIN      
        1 mtikiykssa fdtyllavsv sylgavpvmt syhlptttme vfidrledpf ilfddetkkr
       61 vreisngtks kqipilylme qpdlsvsqsf ldkneisymt htsgttgipk lichsahsmg
      121 wrtkwqktvf tkisekklia fhispvhsrf nigisslmsm gfpmmplana qsskvvhmle
      181 vhrpialety pnnfvqwrft akehpeafsg iryyhstfda innqtmktfl rtsmaqdavf
      241 lqvygqsecg pmilkahtle slktsdardm gvgledmtsa ritdsvgnvl pentdghiql
      301 lskgraltyy kedarfqenv ygdwwdsgdy gfmdkhghlf lkdrqvdlie tinstlaied
      361 flldsldfla evvivrdknh spqpiialap dkemdwnrww eqvhelprln vpiirdfdai
      421 prtatmkvqr lqiekelksq ks
//
LOCUS       WP_258082375              33 aa            linear   BCT 02-MAR-2025
DEFINITION  group II intron maturase-specific domain-containing protein
            [Enterococcus mundtii].
ACCESSION   WP_258082375
VERSION     WP_258082375.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus mundtii
  ORGANISM  Enterococcus mundtii
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 33)
  AUTHORS   Centron,D. and Roy,P.H.
  TITLE     Presence of a group II intron in a multiresistant Serratia
            marcescens strain that harbors three integrons and a novel gene
            fusion
  JOURNAL   Antimicrob Agents Chemother 46 (5), 1402-1409 (2002)
   PUBMED   11959575
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019984.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08388.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..33
                     /organism="Enterococcus mundtii"
                     /db_xref="taxon:53346"
     Protein         1..33
                     /product="group II intron maturase-specific
                     domain-containing protein"
                     /calculated_mol_wt=3857
     Region          <1..31
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
ORIGIN      
        1 mkvlfkeikq lingwinyyd igemkgyihe lis
//
LOCUS       WP_258082348             722 aa            linear   BCT 02-MAR-2025
DEFINITION  BppU family phage baseplate upper protein [Enterococcus faecium].
ACCESSION   WP_258082348
VERSION     WP_258082348.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 722)
  AUTHORS   Veesler,D., Spinelli,S., Mahony,J., Lichiere,J., Blangy,S.,
            Bricogne,G., Legrand,P., Ortiz-Lombardia,M., Campanacci,V., van
            Sinderen,D. and Cambillau,C.
  TITLE     Structure of the phage TP901-1 1.8 MDa baseplate suggests an
            alternative host adhesion mechanism
  JOURNAL   Proc Natl Acad Sci U S A 109 (23), 8954-8958 (2012)
   PUBMED   22611190
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022117.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10651.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..722
                     /product="BppU family phage baseplate upper protein"
                     /calculated_mol_wt=79526
     Region          10..156
                     /region_name="BppU_N"
                     /note="BppU N-terminal domain; pfam10651"
                     /db_xref="CDD:431419"
     Region          163..>232
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
ORIGIN      
        1 mvykmnesii viqaeatkpn dtnvvfwshd rgtaklrmkl vrkngipqsl pegttvpirl
       61 mfksataegg ygkhdylati edpvngivsi vlednilgyv gtvegsvyid fpndrsldta
      121 grftfyikrs piddstpele dyyfngfsqt idkiekilad gkqeieqkia esetqidakl
      181 kdtndkitka nqdvatlntn idkandridq tnqqigdlgk lkkmysnsid fgnydysgnp
      241 nvmtkpyiae nitggsagav vtpiddgvri ektqvdvprg fevalgnlln ntdyiisydv
      301 lvengyvgdl ktcnvaldgq fegkpnyfgv fymnsvtstd vwqkvsvkfn sganmeklsg
      361 fkfrvflsqs vqvalkiknv kiergstatp yqpnlldapy ylskvalgen iadptvkfpi
      421 tsssegiysk napedfvlge tytvtigatk pasqtirvyl aqkqfndfkp veglvdtwva
      481 tvsitqlgen akgvylfqtp ntslgsctik wlkiekgdtr tpnisqfkyf geglkdsnnp
      541 ndyswdimpe ytekglndsv sltepetilg lknfaeglqs sgvnvaveya kaidtdkytk
      601 hgaiylggca wlawetltfq ktegyakgsy irlgadgnas ftysdvpnif ggylwlggvc
      661 qpdytdggfg syhitvennf ddarkpivrf idspptpvkk lavrgfalvf apaptensqv
      721 ke
//
LOCUS       WP_258082427             339 aa            linear   BCT 02-MAR-2025
DEFINITION  Gfo/Idh/MocA family oxidoreductase [Enterococcus mundtii].
ACCESSION   WP_258082427
VERSION     WP_258082427.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus mundtii
  ORGANISM  Enterococcus mundtii
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 339)
  AUTHORS   Kingston,R.L., Scopes,R.K. and Baker,E.N.
  TITLE     The structure of glucose-fructose oxidoreductase from Zymomonas
            mobilis: an osmoprotective periplasmic enzyme containing
            non-dissociable NADP
  JOURNAL   Structure 4 (12), 1413-1428 (1996)
   PUBMED   8994968
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014893.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02894.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Enterococcus mundtii"
                     /db_xref="taxon:53346"
     Protein         1..339
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /calculated_mol_wt=38094
     Region          7..336
                     /region_name="PRK10206"
                     /note="putative oxidoreductase; Provisional"
                     /db_xref="CDD:182305"
ORIGIN      
        1 mkqlvmaivg ygksakryhl pyinvretik vkyicdlhls qdditelgks niigvtdlst
       61 vleddevivi tlctppethf slakeclear knviiekpfc etlaqaetll qlakeqnvhv
      121 ipyqnrrfds dfltlkkvie rnylgtliel eahidyyrpn tkerkgtild gsfyglgvha
      181 vdqivsifgk pnrvqydlrs vqndestvdd yydvqliygv fkvilkssqv vaksgprfrl
      241 lgtmgayeky gsdqqendlk agvfpgeggf gmdtaneygi vtyrnangdw iekaitsemg
      301 dygcfydgii emlfhnapsi vseeeiqitm eimdgasfg
//
LOCUS       WP_258082435             256 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Enterococcus mundtii].
ACCESSION   WP_258082435
VERSION     WP_258082435.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus mundtii
  ORGANISM  Enterococcus mundtii
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 256)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 256)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Enterococcus mundtii"
                     /db_xref="taxon:53346"
     Protein         1..256
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=28153
     Region          1..251
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(84,112,125,129)
                     /site_type="active"
                     /db_xref="CDD:187632"
     Site            order(112..114,119,125,156..157,163,179,182,227)
                     /site_type="other"
                     /note="steroid binding site"
                     /db_xref="CDD:187632"
ORIGIN      
        1 mkaghqvvat areaaavsae igqherllpl smdvtnsasi dqaihetldy fgridvlinn
       61 agrfstgffe tvtpdqvrdq mevtffgtln vtravlpvmr kqrqghviti saargivgel
      121 fisifsaskf alegwmealg aevapfgilt tivepgafrt kpgkdrlrtl fpeisiedya
      181 eetkkriesv kdfygnepgh rdkfatafis imdmeqppkr wvagkdavdd viakgkqlve
      241 datayfdlst slshed
//
LOCUS       WP_258082472             224 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5597 domain-containing protein [Enterococcus faecium].
ACCESSION   WP_258082472
VERSION     WP_258082472.1
KEYWORDS    RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Larsbrink,J., Thompson,A.J., Lundqvist,M., Gardner,J.G.,
            Davies,G.J. and Brumer,H.
  TITLE     A complex gene locus enables xyloglucan utilization in the model
            saprophyte Cellvibrio japonicus
  JOURNAL   Mol Microbiol 94 (2), 418-433 (2014)
   PUBMED   25171165
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037199.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18120.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Enterococcus faecium"
                     /db_xref="taxon:1352"
     Protein         1..224
                     /product="DUF5597 domain-containing protein"
                     /calculated_mol_wt=26363
     Region          94..187
                     /region_name="DUF5597"
                     /note="Domain of unknown function (DUF5597); pfam18120"
                     /db_xref="CDD:465657"
ORIGIN      
        1 midqplfipe trkdlrylsn cfyafgkgal lyspfgiedl rksteaiide dqaflkelgl
       61 dqaafdptgs lpyftkcyqi ikeltpfltd etikihsfkk ekdmtyqyqd enyrflikyl
      121 skdkkeqlnt aglffqlene yffagcnfal fhdavdeelc seilnfeegy fegkkwiter
      181 vlngderytp yignmpkiik fslytypkke qevvheylad ernl
//
LOCUS       WP_258082900             376 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ABC transporter permease [Salmonella].
ACCESSION   WP_258082900
VERSION     WP_258082900.1
KEYWORDS    RefSeq.
SOURCE      Salmonella
  ORGANISM  Salmonella
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae.
REFERENCE   1  (residues 1 to 376)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024110.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12698.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Salmonella"
                     /db_xref="taxon:590"
     Protein         1..376
                     /product="ABC transporter permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=41820
     Region          <2..356
                     /region_name="ABC2_perm_RbbA"
                     /note="ribosome-associated ATPase/putative transporter
                     RbbA; NF033858"
                     /db_xref="CDD:468210"
ORIGIN      
        1 mskslswrrv ralcvketrq ivrdpsswli avvipllllf ifgyginlds sklrvgille
       61 qqsqealdft hamtgspyid atisdnrhel iekmqagrir glvvipvdfa qqmaregdsa
      121 piqvitdgse pntanfvqgy vegiwqiwqq qraedrgdtf eplidvqtry wfnpaaisqh
      181 fiipgavtii mtvigailts lvvarewerg tmeallstev trvelllckl ipyyflgmla
      241 mllcmlvsvf ilgvpyrgsl vilfiitslf llstlgmgll istitrnqfn aaqvalnaaf
      301 lpsimlsgfi fqidsmpavi ravtyiipar yfvstlqslf lagnipvvlg vnvlfliasa
      361 vmfigltwlk tkrrld
//
LOCUS       WP_258082977              42 aa            linear   BCT 02-MAR-2025
DEFINITION  OadG family transporter subunit, partial [Salmonella enterica].
ACCESSION   WP_258082977
VERSION     WP_258082977.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 42)
  AUTHORS   Schmid,M., Wild,M.R., Dahinden,P. and Dimroth,P.
  TITLE     Subunit gamma of the oxaloacetate decarboxylase Na(+) pump:
            interaction with other subunits/domains of the complex and binding
            site for the Zn(2+) metal ion
  JOURNAL   Biochemistry 41 (4), 1285-1292 (2002)
   PUBMED   11802728
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016187.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04277.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..42
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         1..>42
                     /product="OadG family transporter subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0008948 - oxaloacetate decarboxylase
                     activity [Evidence IEA]"
                     /GO_function="GO:0015081 - sodium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0036376 - sodium ion export across plasma
                     membrane [Evidence IEA]"
     Region          1..>42
                     /region_name="PRK02919"
                     /note="oxaloacetate decarboxylase subunit gamma;
                     Provisional; cl01458"
                     /db_xref="CDD:470212"
ORIGIN      
        1 mnssvllgeg ftlmflamgf vlaflfllif airgmsaavn rf
//
LOCUS       WP_258082945             821 aa            linear   BCT 02-MAR-2025
DEFINITION  Hint domain-containing homing endonuclease [Salmonella enterica].
ACCESSION   WP_258082945
VERSION     WP_258082945.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 821)
  AUTHORS   Moure,C.M., Gimble,F.S. and Quiocho,F.A.
  TITLE     Crystal structure of the intein homing endonuclease PI-SceI bound
            to its recognition sequence
  JOURNAL   Nat Struct Biol 9 (10), 764-770 (2002)
   PUBMED   12219083
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017053.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05203.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..821
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         1..821
                     /product="Hint domain-containing homing endonuclease"
                     /GO_process="GO:0030908 - protein splicing [Evidence IEA]"
                     /calculated_mol_wt=92057
     Region          7..>51
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            29..35
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          34..379
                     /region_name="Hom_end_hint"
                     /note="Hom_end-associated Hint; pfam05203"
                     /db_xref="CDD:368334"
     Region          381..580
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Region          <398..812
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
ORIGIN      
        1 mskfarrpyq klmtsfmlqh prcniwasmg sgkclkrgte vimfdgttkk vedvivgdml
       61 mgpdstprnv lslgrgremm yevkprkges ytvneshils lrtttgiakg swpdntvfdi
      121 svrdwlklpk yvtgpngylk gwrasvdfag keqddvllpp yllglwlgdg tsssgaitsg
      181 enekeireyl esyaarngmq irkegltwsi sygntgpkkh gfthalksag vlnnkhiphn
      241 ykcgdrrqrl ellaglldsd gycdlskagf dwisvserla ddfcylcrsl gfaaykkktr
      301 krctntdvwg dyfrvsvsgd fsevpfvrgr hqnlpkrnin knvlnvgies itpvgvddyf
      361 gftidgdsrf llgdftvthn tsstlwvlnr lfrngqlndd drvlilaplr vasgtwpaeq
      421 arwnfpclrv idatgsekrr iaalesdanv vctnyeview lidyygkddw pftvivades
      481 tklksfrsrs ggskrakals kvafgkvkrf inltgtpspn glkdlwgqnw fidagerlgs
      541 sytaftdrwf nsvqkgksam areyharpga dneihqkmkd isltidaaew fgceapiivp
      601 veidlpkkar qayidmeekl faelesgeve aanaaaktsk clqiasgavy vsgpdgeatk
      661 dwekvhdtkl dalesiveel qgapllvayq fkhelerilk rfpqaqafak gakgnkqmea
      721 wnrgeieilc vhpasaghgl nlqdgghhla fisqgwnleh ylqvverigp vrqkqagher
      781 pvflyhivak dtldevvtar tdekksvqee llnymkrrgk k
//
LOCUS       WP_417281907             398 aa            linear   BCT 02-MAR-2025
DEFINITION  CCA tRNA nucleotidyltransferase [Bacillus salitolerans].
ACCESSION   WP_417281907
VERSION     WP_417281907.1
KEYWORDS    RefSeq.
SOURCE      Bacillus salitolerans
  ORGANISM  Bacillus salitolerans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF009814.0
            Evidence Source    :: NCBI Protein Cluster (PRK)
            Source Identifier  :: PRK13299
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Bacillus salitolerans"
                     /db_xref="taxon:1437434"
     Protein         1..398
                     /product="CCA tRNA nucleotidyltransferase"
                     /EC_number="2.7.7.72"
                     /GO_function="GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0001680 - tRNA 3'-terminal CCA addition
                     [Evidence IEA]"
                     /calculated_mol_wt=46038
     Region          1..396
                     /region_name="PRK13299"
                     /note="tRNA CCA-pyrophosphorylase; Provisional"
                     /db_xref="CDD:237339"
ORIGIN      
        1 mqeefqrpmh ilnrlidqgy eayfvggair dmllertigd vdiatsaqpe evmnlfsktv
       61 pvgiehgtvv vllqdtpyev ttfrmdeeyv dyrrpkevtf ikslhedlkr rdftmnaiam
      121 dregvlidpf egqasiqkrl iqtvgdpser fhedalrmlr avrfhsqlsf qveadtllgi
      181 kknaehlkhv sierittefe kilkgkscht alaliietgl vdyivnvnny kdqlmkwekv
      241 dtsllltrae lwalfcyflq vkdcesflms wklptkvikq ttlivdslvy iqkhgwtkil
      301 myklgidlal stervklivq hqhaqntldi fketymslpi fsrtdlqvkg tdiimwskqs
      361 pgpwvaktie rieeavvngk irndkeqike wlntcnll
//
LOCUS       WP_258085148             223 aa            linear   BCT 02-MAR-2025
DEFINITION  low temperature requirement protein A [Rhodococcus opacus].
ACCESSION   WP_258085148
VERSION     WP_258085148.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus opacus
  ORGANISM  Rhodococcus opacus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 223)
  AUTHORS   Zheng,W. and Kathariou,S.
  TITLE     Differentiation of epidemic-associated strains of Listeria
            monocytogenes by restriction fragment length polymorphism in a gene
            region essential for growth at low temperatures (4 degrees C)
  JOURNAL   Appl Environ Microbiol 61 (12), 4310-4314 (1995)
   PUBMED   8534098
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018479.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06772.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Rhodococcus opacus"
                     /db_xref="taxon:37919"
     Protein         1..223
                     /product="low temperature requirement protein A"
                     /calculated_mol_wt=24457
     Region          4..>202
                     /region_name="LtrA"
                     /note="Bacterial low temperature requirement A protein
                     (LtrA); cl01754"
                     /db_xref="CDD:470328"
ORIGIN      
        1 mmvrearsth pevsplelff dlvfvlaigq lthhlvdhlt wggaaetlva lvavcgvwaf
       61 ttfevtlldi ertgtrvvti tvmglglfmn agighaydds pwlfvvpmll alngpaiyaa
      121 ataptpllrr hflhvliwfa vsapfwvaga aldtqwrmwc wavaalidlv gtwtahpvpg
      181 gairtqqlpf daehmlermr lfliillgei illgetvltp waa
//
LOCUS       WP_258085162              74 aa            linear   BCT 02-MAR-2025
DEFINITION  cytosine permease [Rhodococcus opacus].
ACCESSION   WP_258085162
VERSION     WP_258085162.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus opacus
  ORGANISM  Rhodococcus opacus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 74)
  AUTHORS   Vickers,M.F., Yao,S.Y., Baldwin,S.A., Young,J.D. and Cass,C.E.
  TITLE     Nucleoside transporter proteins of Saccharomyces cerevisiae.
            Demonstration of a transporter (FUI1) with high uridine selectivity
            in plasma membranes and a transporter (FUN26) with broad nucleoside
            selectivity in intracellular membranes
  JOURNAL   J Biol Chem 275 (34), 25931-25938 (2000)
   PUBMED   10827169
REFERENCE   2  (residues 1 to 74)
  AUTHORS   Danielsen,S., Kilstrup,M., Barilla,K., Jochimsen,B. and Neuhard,J.
  TITLE     Characterization of the Escherichia coli codBA operon encoding
            cytosine permease and cytosine deaminase
  JOURNAL   Mol Microbiol 6 (10), 1335-1344 (1992)
   PUBMED   1640834
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014218.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02133.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Rhodococcus opacus"
                     /db_xref="taxon:37919"
     Protein         1..74
                     /product="cytosine permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=7816
     Region          7..>73
                     /region_name="CodB"
                     /note="Purine-cytosine permease or related protein
                     [Nucleotide transport and metabolism]; COG1457"
                     /db_xref="CDD:441066"
ORIGIN      
        1 mpdthvapml ekhtigfvpe sdrhgkvrdl ftlwfggnla plpivtgalg pslfglslww
       61 slvafvvghl agap
//
LOCUS       WP_258085178             183 aa            linear   BCT 02-MAR-2025
DEFINITION  FHA domain-containing protein [Rhodococcus opacus].
ACCESSION   WP_258085178
VERSION     WP_258085178.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus opacus
  ORGANISM  Rhodococcus opacus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 183)
  AUTHORS   Pallen,M., Chaudhuri,R. and Khan,A.
  TITLE     Bacterial FHA domains: neglected players in the phospho-threonine
            signalling game?
  JOURNAL   Trends Microbiol 10 (12), 556-563 (2002)
   PUBMED   12564991
REFERENCE   2  (residues 1 to 183)
  AUTHORS   Durocher,D., Henckel,J., Fersht,A.R. and Jackson,S.P.
  TITLE     The FHA domain is a modular phosphopeptide recognition motif
  JOURNAL   Mol Cell 4 (3), 387-394 (1999)
   PUBMED   10518219
REFERENCE   3  (residues 1 to 183)
  AUTHORS   Hofmann,K. and Bucher,P.
  TITLE     The FHA domain: a putative nuclear signalling domain found in
            protein kinases and transcription factors
  JOURNAL   Trends Biochem Sci 20 (9), 347-349 (1995)
   PUBMED   7482699
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012708.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00498.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Rhodococcus opacus"
                     /db_xref="taxon:37919"
     Protein         1..183
                     /product="FHA domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=19916
     Region          6..83
                     /region_name="FHA"
                     /note="Forkhead associated (FHA) domain, binds pSer, pThr,
                     pTyr [Signal transduction mechanisms]; COG1716"
                     /db_xref="CDD:441322"
     Region          <105..180
                     /region_name="CitB"
                     /note="DNA-binding response regulator, NarL/FixJ family,
                     contains REC and HTH domains [Signal transduction
                     mechanisms, Transcription]; COG2197"
                     /db_xref="CDD:441799"
ORIGIN      
        1 mplapdrspi tigrathadl slqsdpdisr lhatvehlgt ywtvcdngls rngtvvngtr
       61 lrgrhilrpg dvirigastl tyhgqpatdc gitnigdtld tplhltpaqh tvltelcrpf
      121 hdgtdhpipa snqqiadalh lsietvkthl ralfttfqid dlpqhhkrsq latralthni
      181 ptp
//
LOCUS       WP_258085224             126 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF222 domain-containing protein [Rhodococcus opacus].
ACCESSION   WP_258085224
VERSION     WP_258085224.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus opacus
  ORGANISM  Rhodococcus opacus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (residues 1 to 126)
  AUTHORS   Davis,E.O., Dullaghan,E.M. and Rand,L.
  TITLE     Definition of the mycobacterial SOS box and use to identify
            LexA-regulated genes in Mycobacterium tuberculosis
  JOURNAL   J Bacteriol 184 (12), 3287-3295 (2002)
   PUBMED   12029045
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014741.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02720.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Rhodococcus opacus"
                     /db_xref="taxon:37919"
     Protein         1..126
                     /product="DUF222 domain-containing protein"
                     /calculated_mol_wt=12991
ORIGIN      
        1 mfrvmlesgi lgrhrglpvt viitmtldql enaaggvttt atggllplgd alkspnaptr
       61 csscstttag pciwdgadew rartnaslss prkadahdlv arprpacarc ttcrsgatad
      121 tptsth
//
LOCUS       WP_258085228             296 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Rhodococcus opacus].
ACCESSION   WP_258085228
VERSION     WP_258085228.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus opacus
  ORGANISM  Rhodococcus opacus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Rhodococcus opacus"
                     /db_xref="taxon:37919"
     Protein         1..296
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=30918
     Region          <70..220
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 mlfliegipp illagavwfc lvdrpadakw ltdeekatve gdlaadeark agdgkgstgh
       61 tglraalrdp rvlilglcac gaytlanavs fwtpriinna gvdnvlslgl fsaitplagi
      121 ivmqivgrhs drtlerrwha agswfvasag lvalsfvtns pqmvvvllav vaaahyaglt
      181 vfysipsiyl sgrgtatgia lvttmgsfaa alspallgfi qehpqplvgt ahqrrprgdr
      241 whsarrrypg arlegeelmr pgpstaasgw csdvkpgevg sggpppaarp rgggqg
//
LOCUS       WP_258085248             223 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: condensation domain-containing protein [Rhodococcus].
ACCESSION   WP_258085248
VERSION     WP_258085248.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus
  ORGANISM  Rhodococcus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae.
REFERENCE   1  (residues 1 to 223)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Rhodococcus"
                     /db_xref="taxon:1827"
     Protein         1..223
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=23764
     Region          <5..209
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mtgalslpsd rprpekwsyg aarlpfaiap avhgalleaa rthhtglfta lhaavtllla
       61 rlsgatdiai gapvaghghp slddvvgmfv ntvvlrtqve stttfddlva rcsghrvagv
      121 rargcavrap ggdprsrtvt vvapvlpgrd larklrprrt rcrrthfdit pspldiakcd
      181 phfyfterhd gtgapdgida klvystdlfn kglravlstr sel
//
LOCUS       WP_258085261             202 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: condensation domain-containing protein [Rhodococcus].
ACCESSION   WP_258085261
VERSION     WP_258085261.1
KEYWORDS    RefSeq.
SOURCE      Rhodococcus
  ORGANISM  Rhodococcus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae.
REFERENCE   1  (residues 1 to 202)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Rhodococcus"
                     /db_xref="taxon:1827"
     Protein         1..202
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=22620
     Region          34..>199
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mfdaptvaal atrigestrd tdrhrlgaip lpdrlplspa qtfidrtvta pahynipftl
       61 rvrgafdhta lrravadvle rhrplrtiyp dtpagpyqhl ladavpdprr rrniravlta
      121 gfdvrthppl rirvfefgpd dhmiactfhh igvdgwslap lardlvlays araddsapqw
      181 qdlpvqyady tlwrravlgq rg
//
LOCUS       WP_258085272             313 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Staphylococcus
            ureilyticus].
ACCESSION   WP_258085272
VERSION     WP_258085272.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus ureilyticus
  ORGANISM  Staphylococcus ureilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus cohnii species
            complex.
REFERENCE   1  (residues 1 to 313)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Staphylococcus ureilyticus"
                     /db_xref="taxon:94138"
     Protein         1..313
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=35140
     Region          2..306
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(7,9..10,12,30..32,74..76,118..120,144,148,171..174)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(94,120,144,148)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mkilitggag figshlaeyf nkanevfild nlstghrsnv efiddahfie ndvintsfvt
       61 slvekeqfdi vihlaavvsv vetindpiks qsvningtln lleanrqynh nlkkfifass
      121 aavygntegl pkqvetfidp espyavekya geqytkiyst lyqlpttalr ffniygprqd
      181 phspysglls iidnkfknne tftffgdgeq trdfvyvkdl vqavstvldn evtngkiynl
      241 atgkqislle ifdkfkkvyn ksidyqfaes rsgdikhsca dikglealgy kpqydimsgl
      301 teyinysntd kkn
//
LOCUS       WP_258085343            1148 aa            linear   BCT 02-MAR-2025
DEFINITION  dynamin family protein [Staphylococcus ureilyticus].
ACCESSION   WP_258085343
VERSION     WP_258085343.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus ureilyticus
  ORGANISM  Staphylococcus ureilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus cohnii species
            complex.
REFERENCE   1  (residues 1 to 1148)
  AUTHORS   Warnock,D.E. and Schmid,S.L.
  TITLE     Dynamin GTPase, a force-generating molecular switch
  JOURNAL   Bioessays 18 (11), 885-893 (1996)
   PUBMED   8939066
REFERENCE   2  (residues 1 to 1148)
  AUTHORS   Obar,R.A., Collins,C.A., Hammarback,J.A., Shpetner,H.S. and
            Vallee,R.B.
  TITLE     Molecular cloning of the microtubule-associated mechanochemical
            enzyme dynamin reveals homology with a new family of GTP-binding
            proteins
  JOURNAL   Nature 347 (6290), 256-261 (1990)
   PUBMED   2144893
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012570.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00350.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Staphylococcus ureilyticus"
                     /db_xref="taxon:94138"
     Protein         1..1148
                     /product="dynamin family protein"
                     /calculated_mol_wt=134033
     Region          45..231
                     /region_name="DLP_2"
                     /note="Dynamin-like protein including dynamins,
                     mitofusins, and guanylate-binding proteins; cd09912"
                     /db_xref="CDD:206739"
     Site            47..54
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206739"
     Site            order(49..55,139,194..195,197,231)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206739"
     Site            74
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206739"
     Site            78..80
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206739"
     Site            136..139
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206739"
     Site            order(138..139,159..160)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206739"
     Site            194..197
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206739"
     Region          571..1136
                     /region_name="CrfC"
                     /note="Replication fork clamp-binding protein CrfC
                     (dynamin-like GTPase family) [Replication, recombination
                     and repair]; COG0699"
                     /db_xref="CDD:440463"
     Region          593..798
                     /region_name="Dynamin_N"
                     /note="Dynamin family; pfam00350"
                     /db_xref="CDD:459775"
ORIGIN      
        1 msktkqldil yklkkeveks nnhrlihiin qvikkifleq ytatfvghfs agkstlinml
       61 leesilpssp vpttsntaiv svadepgiia nlnnqkytll tnydevkqmn renidvesve
      121 ikfpsekfnk gftlqdtpgv dsnvsthqss teefmytsnv lfytvdynhv qsamnfqfmk
      181 qlnyagvpvv fvinqidkhh eseipfdtfk rrveksiaew eikldqifyv skfehehnqi
      241 qalsdylidk dqhresmady vertvnfitd eqlsfiqhei qtilneldif eedfdqayln
      301 fqqhqqvsee akllnnpdql ydflkqkrka ildnayvmth dtrekirtyl esktkdfkvg
      361 gifnkkkktl etqqirlqel leqlqekvnq eirqplredm sfltrfinss evndailnqh
      421 yqmppnlidd lyqmqisisn qyvltfsddl mksikqfifk eteplfekai shsqandigt
      481 eevedyndyv kfmelrnlre sletqnyrhy yihiddsldk lidreeityq akpehskvqk
      541 qnrsnttkrk ttdtsiqdik nslnlikdip lfeqtkqdin dtlkrldhki ikigvfgtfs
      601 agksslinal lgdaylvssp npttaamtel tygeesqitl kspeqileel nqlfelenkt
      661 fdsieaflnq ntekltasle knklafinai ekhyamyqem leqglthtia rdeikkwsae
      721 deyatfvntv hlklpiywlk dkvivdslgl hsnnqrhtne tekiltssdl ilyvsyfnhs
      781 ftdndkrfie hmkemnqlse nqsfkmvina tdlaeteedl navinyvsda lnqvnmnsdi
      841 favssrealk igdlgidklk nsinyftqve skdilqqqmt kqltniseaf dqmiedaqhn
      901 qskikqrknk leqyhnqill nnnilqiavq lasnevedqi yhlnerlkiq lldevksiyn
      961 gqmtqsnnfn eakrhstkqy ldqihqrlyl eqsllvervk kyfiqqihee iaplkqkleq
     1021 lhifiepefn ksnielddpy lkidlsqmls alpksltkkn ilqpkmqnev qttitqntlv
     1081 qlkpciaelr kalieivnnl nndaeikfnq yekdihtqik qllafemdhs likqlqetns
     1141 elkaqlli
//
LOCUS       WP_258085345             905 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase C-terminal domain-containing protein [Staphylococcus
            ureilyticus].
ACCESSION   WP_258085345
VERSION     WP_258085345.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus ureilyticus
  ORGANISM  Staphylococcus ureilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus cohnii species
            complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13307.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Staphylococcus ureilyticus"
                     /db_xref="taxon:94138"
     Protein         1..905
                     /product="helicase C-terminal domain-containing protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /GO_function="GO:0004386 - helicase activity [Evidence
                     IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA]"
                     /GO_process="GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /calculated_mol_wt=105479
     Region          6..894
                     /region_name="dinG_rel"
                     /note="DnaQ family exonuclease/DinG family helicase,
                     putative; TIGR01407"
                     /db_xref="CDD:273602"
ORIGIN      
        1 mtqpcyavvd lettgnqldy deiiqigitf vrdnkiigty hsmvktdlei ppfiqaltsi
       61 edemlkqspy fheiaddiyk qlegcifvah nvtfdlnfik ksfkkcniry rpkkvldtle
      121 lfkvafptdk syqlselaea hgitlnnahr adedaattaq lmilafnkfe alhldtlkql
      181 yylsknlkyd lhdilfemar nhnheqlsed feqfeqiiyk kqrdfkaptv nfdgtlkdly
      241 tditeklnlt yrpqqlylae iileqlmhse kamieaplgs gksfsyllas lmyniqtgkh
      301 vmistntkll qnqllekdip alksalnfki naslikskrd yislglisqi lkdesnnyev
      361 silkmqlliw itethtgdiq eldlkggqkm yyeqkletyv pvrndinyfn fikrnakniq
      421 igitnhahli hashdntiyq lfddciidea hrlpdyalnq vtnelsysdv kyqlgligkt
      481 endkllaaid hleqqrilek ldippidvfg lktnineihd lneqlfstmf nsiqqseihd
      541 devhkvhfvy hfdvtpilnd lhaiihklnm tleffngmsh ktiktvrkql lyindkfrai
      601 etslknnhts ylsikninqk stiklnvkdy dvkeiltkqv ldkfnaltfi sgtltfnhsf
      661 enfkqwfnkd iifntyeldt atvssnqttv fipndvasyn ykniddyvsf ivnyvieytt
      721 vieskclilf tsykmmhmvq ellnelpefe dyviltqqqn qnykivqqfn sfskaillgt
      781 stffegfdfq sngikcvmit klpfmnhnnt kywlmeseft stfkdfvlpd avtrfrqglg
      841 rlirseqdkg iivsfddrli ksnykqffeq slesyrqkkg dikqfssllk kikketihhk
      901 sntrn
//
LOCUS       WP_258085385             474 aa            linear   BCT 02-MAR-2025
DEFINITION  SH3 domain-containing protein [Staphylococcus ureilyticus].
ACCESSION   WP_258085385
VERSION     WP_258085385.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus ureilyticus
  ORGANISM  Staphylococcus ureilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus cohnii species
            complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020049.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08460.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Staphylococcus ureilyticus"
                     /db_xref="taxon:94138"
     Protein         1..474
                     /product="SH3 domain-containing protein"
                     /calculated_mol_wt=52900
     Region          23..113
                     /region_name="CHAP"
                     /note="CHAP domain; pfam05257"
                     /db_xref="CDD:461605"
     Region          191..315
                     /region_name="Ami_2"
                     /note="Ami_2 domain; smart00644"
                     /db_xref="CDD:214760"
     Site            order(199,229,306,312,314)
                     /site_type="active"
                     /note="amidase catalytic site [active]"
                     /db_xref="CDD:133475"
     Site            order(199,306,314)
                     /site_type="other"
                     /note="Zn binding residues [ion binding]"
                     /db_xref="CDD:133475"
     Site            order(200..201,226,229,242,249..250,257,306,310,312..314)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:133475"
     Region          388..453
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
ORIGIN      
        1 mvakltqkea vayvksqegk gydfdnfagw qcfdsvnyyw yqlfghglkg egaadipfkn
       61 dftneakvyq ntpsflpkpg dvvvwnrkyg ggyghvavvi satlnsfvvi eqnwlgggan
      121 ktevatkrtk sydnpmwfir phyksesakk vsaqsatknt akkktkakkk mkkltyirde
      181 vkgyrlpnrg ykptsitlhn dagsvgatae ayhrglvnap lsrleagvah syisgntvyq
      241 alpesriawh tanqngnkns ygieicqsig asdkvflane qaafqesarl lnkwglkanr
      301 ntirmhmefs qtscphrsmk lhtgfdpvtq gvpsqaiklk lkdyfikqir ayqagkvpta
      361 svskgtssas ntkstvagsw krnsygtwym sekarftngs qpimvrtvgp frscpyaydf
      421 qpggwcdyts vllqdnhvwl eyqwkgtlyy lpirtwdgtp pprhsvgklw gsis
//
LOCUS       WP_258085375             369 aa            linear   BCT 02-MAR-2025
DEFINITION  GAF domain-containing sensor histidine kinase [Staphylococcus
            ureilyticus].
ACCESSION   WP_258085375
VERSION     WP_258085375.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus ureilyticus
  ORGANISM  Staphylococcus ureilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus cohnii species
            complex.
REFERENCE   1  (residues 1 to 369)
  AUTHORS   Ortet,P., Whitworth,D.E., Santaella,C., Achouak,W. and Barakat,M.
  TITLE     P2CS: updates of the prokaryotic two-component systems database
  JOURNAL   Nucleic Acids Res 43 (Database issue), D536-D541 (2015)
   PUBMED   25324303
REFERENCE   2  (residues 1 to 369)
  AUTHORS   Heikaus,C.C., Pandit,J. and Klevit,R.E.
  TITLE     Cyclic nucleotide binding GAF domains from phosphodiesterases:
            structural and mechanistic insights
  JOURNAL   Structure 17 (12), 1551-1557 (2009)
   PUBMED   20004158
REFERENCE   3  (residues 1 to 369)
  AUTHORS   Ho,Y.S., Burden,L.M. and Hurley,J.H.
  TITLE     Structure of the GAF domain, a ubiquitous signaling motif and a new
            class of cyclic GMP receptor
  JOURNAL   EMBO J 19 (20), 5288-5299 (2000)
   PUBMED   11032796
  REMARK    Erratum:[EMBO J 2001 Mar 15;20(6):1483]
REFERENCE   4  (residues 1 to 369)
  AUTHORS   Dutta,R. and Inouye,M.
  TITLE     GHKL, an emergent ATPase/kinase superfamily
  JOURNAL   Trends Biochem Sci 25 (1), 24-28 (2000)
   PUBMED   10637609
REFERENCE   5  (residues 1 to 369)
  AUTHORS   Stock,A.M., Robinson,V.L. and Goudreau,P.N.
  TITLE     Two-component signal transduction
  JOURNAL   Annu Rev Biochem 69, 183-215 (2000)
   PUBMED   10966457
REFERENCE   6  (residues 1 to 369)
  AUTHORS   Stock,J.
  TITLE     Signal transduction: Gyrating protein kinases
  JOURNAL   Curr Biol 9 (10), R364-R367 (1999)
   PUBMED   10339418
REFERENCE   7  (residues 1 to 369)
  AUTHORS   Aravind,L. and Ponting,C.P.
  TITLE     The GAF domain: an evolutionary link between diverse
            phototransducing proteins
  JOURNAL   Trends Biochem Sci 22 (12), 458-459 (1997)
   PUBMED   9433123
REFERENCE   8  (residues 1 to 369)
  AUTHORS   Alex,L.A. and Simon,M.I.
  TITLE     Protein histidine kinases and signal transduction in prokaryotes
            and eukaryotes
  JOURNAL   Trends Genet 10 (4), 133-138 (1994)
   PUBMED   8029829
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11453261
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Staphylococcus ureilyticus"
                     /db_xref="taxon:94138"
     Protein         1..369
                     /product="GAF domain-containing sensor histidine kinase"
                     /EC_number="2.7.13.3"
                     /GO_function="GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=41589
     Region          <6..>289
                     /region_name="GAF"
                     /note="GAF domain [Signal transduction mechanisms];
                     COG2203"
                     /db_xref="CDD:441805"
     Region          171..369
                     /region_name="ComP"
                     /note="Signal transduction histidine kinase ComP [Signal
                     transduction mechanisms]; COG4585"
                     /db_xref="CDD:443642"
ORIGIN      
        1 mekptrlall keiaeflnee tetysmlqga lkslidgsef ttgwiffidd vgqhelvsyn
       61 glpgalennh cqymrkgtcw cvqayqnkkl tkasniinct rinlanrayh eetdgithha
      121 tvplrsgeeq fgllnvatpy trrysaenle llesvalqig saikrilltd qekeaarise
      181 rnrlardlhd svnqmlfsvk ltahaalgmt qenvsrkafq viedtsqqav nemraliwql
      241 kpvgleqglv nalkqyskll qlelvvkvdg liklpsqiee nvyrivqeam nntkkhsett
      301 qvrldlvqdd nyllvtiadf gkgfdkhksn lhhshglnnm kqrtkqisgk ltiegepnkg
      361 tkihisipl
//
LOCUS       WP_258085470             318 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Staphylococcus
            ureilyticus].
ACCESSION   WP_258085470
VERSION     WP_258085470.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus ureilyticus
  ORGANISM  Staphylococcus ureilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus cohnii species
            complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Staphylococcus ureilyticus"
                     /db_xref="taxon:94138"
     Protein         1..318
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=37503
     Region          5..>277
                     /region_name="viru_reg_Rsp"
                     /note="AraC family transcriptional regulator Rsp;
                     NF033869"
                     /db_xref="CDD:411433"
ORIGIN      
        1 mitidhacii nnadlyqyid ienlielkip lplfiekdks ianalfdikq ikyieqfrnl
       61 vlqklqnhnq nrkcmhlyis niiefllkea kvdlddqylp ilytkhplvq rltqyihkhi
      121 neplttkqvs nafyisqsyi silfskilnm nfkqytsslk ialslfdlle keqsiydval
      181 kysftnvsty sknfkfyikm ppkfyihqfr kndlnspyqv slstpnlskt inklynfshn
      241 qhissnqivl nklkytqkfn mtrtfitfnd lhklisfnqs tfsinmlsli skpnlillht
      301 nfddlnkldh hnvfvaik
//
LOCUS       WP_258085476             322 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase fold domain-containing protein [Staphylococcus
            ureilyticus].
ACCESSION   WP_258085476
VERSION     WP_258085476.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus ureilyticus
  ORGANISM  Staphylococcus ureilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus cohnii species
            complex.
REFERENCE   1  (residues 1 to 322)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019474.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07859.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Staphylococcus ureilyticus"
                     /db_xref="taxon:94138"
     Protein         1..322
                     /product="alpha/beta hydrolase fold domain-containing
                     protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=36872
     Region          102..287
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
ORIGIN      
        1 mlkkilifas vsviasylfa kliekrsyqs flyeimirat kmkqpfekki naqkalasvk
       61 aqtqgeyagt dynfdnavyt kklhditnyv vndredhqqk vviyihggaw fqdplpyhfe
      121 yidmlatafd akvimpiypk iphatyketf elleeiyrye ldqkmsseri vimgdsaggq
      181 ialsfaqylk tldlpqpsdi vmispvldgt fshpeihsye kidpmlgveg skylislwad
      241 klsltdwrvs piygtfnglg rmtisigtke tlypdavkls rmlnaqgihh nfipgyqlfh
      301 ihpifpiper aqfikklkki id
//
LOCUS       WP_258085568             214 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2975 domain-containing protein [Staphylococcus ureilyticus].
ACCESSION   WP_258085568
VERSION     WP_258085568.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus ureilyticus
  ORGANISM  Staphylococcus ureilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus cohnii species
            complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022636.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11188.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Staphylococcus ureilyticus"
                     /db_xref="taxon:94138"
     Protein         1..214
                     /product="DUF2975 domain-containing protein"
                     /calculated_mol_wt=24114
ORIGIN      
        1 mstikskrfn iliktltila tialvltsls ilpiiiaiia lliipssfin tqldkankpf
       61 wvdslglksh ditkhdlnsi tfpkpsvili llliivliai yilviayvrk wlknvskgqv
      121 ftnknasiii lisycfiglg vfeaffelan nfmiynflgq naklyalmdk dietfadfff
      181 nfnftlilag iviwiignvf kygaylqdef dytv
//
LOCUS       WP_258085574             317 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-dependent oxidoreductase [Staphylococcus ureilyticus].
ACCESSION   WP_258085574
VERSION     WP_258085574.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus ureilyticus
  ORGANISM  Staphylococcus ureilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus cohnii species
            complex.
REFERENCE   1  (residues 1 to 317)
  AUTHORS   Dengler,U., Niefind,K., Kiess,M. and Schomburg,D.
  TITLE     Crystal structure of a ternary complex of D-2-hydroxyisocaproate
            dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate
            at 1.9 A resolution
  JOURNAL   J Mol Biol 267 (3), 640-660 (1997)
   PUBMED   9126843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02826.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Staphylococcus ureilyticus"
                     /db_xref="taxon:94138"
     Protein         1..317
                     /product="NAD(P)-dependent oxidoreductase"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
                     /calculated_mol_wt=34852
     Region          2..317
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(152..154,156,174..176,206..207,234)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:240631"
ORIGIN      
        1 mkkifiagai peaglnqleq hfdvdmytge tliseallie kikdvdalit llstnvsrkv
       61 ietapklkii anygagfnni dieaarendi nvtntpiast nstaeltmgi llavarripe
      121 gdqlcrnegf ngwsplffrg revsgktigi iglgeigtav arrakgfdmn vlysgpkrye
      181 dkeaelnsey vsqdellnrs dfvtlncayn eklkhmidyn aikkmkptsy linasrgpiv
      241 yeeelvkale egiiegaald vfefepkite alksmknvvi tphignatfe ardmmadiaa
      301 snvvkqlsge qpnyivn
//
LOCUS       WP_258085662             203 aa            linear   BCT 02-MAR-2025
DEFINITION  YIP1 family protein [Staphylococcus ureilyticus].
ACCESSION   WP_258085662
VERSION     WP_258085662.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus ureilyticus
  ORGANISM  Staphylococcus ureilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus cohnii species
            complex.
REFERENCE   1  (residues 1 to 203)
  AUTHORS   Yang,X., Matern,H.T. and Gallwitz,D.
  TITLE     Specific binding to a novel and essential Golgi membrane protein
            (Yip1p) functionally links the transport GTPases Ypt1p and Ypt31p
  JOURNAL   EMBO J 17 (17), 4954-4963 (1998)
   PUBMED   9724632
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016764.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04893.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Staphylococcus ureilyticus"
                     /db_xref="taxon:94138"
     Protein         1..203
                     /product="YIP1 family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=21640
ORIGIN      
        1 mensnlpfaq hfsklreqpk wglkliiaiv vialsttvsa lsidyneiyq dagasaqdmg
       61 nmqtigligg iiagliggif gigitflifl viskimksda takpifsatl sftiitgiig
      121 livaliqwia glsptdynia slnvfdkgnq mlgafnlqtl isayvfgiml fatnrlskka
      181 siiwaiayii vsidfaliga sfq
//
LOCUS       WP_258085687             236 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Staphylococcus ureilyticus].
ACCESSION   WP_258085687
VERSION     WP_258085687.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus ureilyticus
  ORGANISM  Staphylococcus ureilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus cohnii species
            complex.
REFERENCE   1  (residues 1 to 236)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024091.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12679.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Staphylococcus ureilyticus"
                     /db_xref="taxon:94138"
     Protein         1..236
                     /product="ABC transporter permease subunit"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=26639
ORIGIN      
        1 mnitrlsall ekdfkeairn psiifmpiiv lafsffyrfi mselsdydsa itlmqliiin
       61 mafvavattp iitmfaeene kgtlkgliet patkleills kaiimailai ittiisllll
      121 dsainfeiqt yfgfaillif yltlgltlgl lanstgtatt ysmipffifa mtplfetmkd
      181 vlnlgffekl lsilpiglil eldtnhqpfn lffliiwliv silsliftyh ykfqkr
//
LOCUS       WP_258085694             552 aa            linear   BCT 02-MAR-2025
DEFINITION  DpnII family type II restriction endonuclease [Staphylococcus
            ureilyticus].
ACCESSION   WP_258085694
VERSION     WP_258085694.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus ureilyticus
  ORGANISM  Staphylococcus ureilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus cohnii species
            complex.
REFERENCE   1  (residues 1 to 552)
  AUTHORS   Sekizaki,T., Otani,Y., Osaki,M., Takamatsu,D. and Shimoji,Y.
  TITLE     Evidence for horizontal transfer of SsuDAT1I
            restriction-modification genes to the Streptococcus suis genome
  JOURNAL   J Bacteriol 183 (2), 500-511 (2001)
   PUBMED   11133943
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016443.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04556.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Staphylococcus ureilyticus"
                     /db_xref="taxon:94138"
     Protein         1..552
                     /product="DpnII family type II restriction endonuclease"
                     /EC_number="3.1.21.4"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0009036 - type II site-specific
                     deoxyribonuclease activity [Evidence IEA]"
                     /GO_process="GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /calculated_mol_wt=64729
     Region          5..274
                     /region_name="Dam"
                     /note="DNA-adenine methylase [Replication, recombination
                     and repair]; COG0338"
                     /db_xref="CDD:440107"
     Region          290..551
                     /region_name="DpnII"
                     /note="DpnII restriction endonuclease; pfam04556"
                     /db_xref="CDD:428007"
ORIGIN      
        1 msdyklspfv kwaggktqll dainalipye fdtyhepflg ggatllsnqp knaiindlny
       61 elmttysvik hdvgpfikel knmvkkhnsn dakdfymavr eqdltnlndv eiasrflyln
      121 ktgfnglyrv nskgkfnvpf nkketiknst vfsetklrnl nkylnendvl ilnddyneal
      181 ekvsendfvf vdspydeays nyqkggfhek ehrelaerli eldkkgvkwl vtnhntkliq
      241 slyrqfdfye ipvnrfinsd aqkrsnatne vlilnykpnk rqvkefnkvk fykqlkptsf
      301 vlkeyvkwek lqenvkeyel qlndlnvlma sddiefndkf erlysqrpes fdilplfiss
      361 rnkemeywss dgeaktygfd kketvfefli esglkdnlfm nnryknaldy ilglevglss
      421 ndkknytgtw msnqianmlk qydivyrkev pykeiidanr ikdktfdfvf tidgitycme
      481 vnffntsgsk inseaerfie lnkelqnyed iefiwvtdgi glkknqtsin kamkaidnly
      541 nlttfdnflk el
//
LOCUS       WP_258085735             116 aa            linear   BCT 02-MAR-2025
DEFINITION  PLDc N-terminal domain-containing protein, partial [Staphylococcus
            ureilyticus].
ACCESSION   WP_258085735
VERSION     WP_258085735.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus ureilyticus
  ORGANISM  Staphylococcus ureilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus cohnii species
            complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024788.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13396.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Staphylococcus ureilyticus"
                     /db_xref="taxon:94138"
     Protein         1..>116
                     /product="PLDc N-terminal domain-containing protein"
     Region          15..>116
                     /region_name="bac_cardiolipin"
                     /note="cardiolipin synthase; TIGR04265"
                     /db_xref="CDD:211988"
ORIGIN      
        1 midifaityn htnviinvil igafilnlif aftiifmerr sagsvwawil vlglipilgf
       61 ivyllfgrqi qrehifslde edkvgiemiv neqlealknd dfskgnhqiv kfkdmv
//
LOCUS       WP_258085828             553 aa            linear   BCT 02-MAR-2025
DEFINITION  tail spike protein, partial [Salmonella enterica].
ACCESSION   WP_258085828
VERSION     WP_258085828.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 553)
  AUTHORS   Steinbacher,S., Baxa,U., Miller,S., Weintraub,A., Seckler,R. and
            Huber,R.
  TITLE     Crystal structure of phage P22 tailspike protein complexed with
            Salmonella sp. O-antigen receptors
  JOURNAL   Proc Natl Acad Sci U S A 93 (20), 10584-10588 (1996)
   PUBMED   8855221
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020812.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09251.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         <1..553
                     /product="tail spike protein"
     Region          20..551
                     /region_name="PhageP22-tail"
                     /note="Salmonella phage P22 tail-spike; pfam09251"
                     /db_xref="CDD:312676"
ORIGIN      
        1 ianvlkydpd qysieadkkf kysvklsdyp tlqdaasaav dgllidvdyh ftdgetvdfs
       61 gkkltiecka kfigdgkltf enlgsgsriv hphmqsqtvp yvisrwdsng ewitepstii
      121 stltqsrtqg yaptvndvdi ynslpdnvkn qnlishliis nssgidvfyp katfgsyesf
      181 knnnvkfwyp rdfygdmsnc iaftawdstd yyhgnyvigg stnygsgsgv cfyrndggvg
      241 hdggviggft pyrcgesgvk tyqnevngis qrcynlrfid inpietyydg vdlnadygtp
      301 terqhdytla qyawnnlptn hivsniqayr thgvgifgdg stgfyrdiya sysrgagifi
      361 kgsgknfknl tsiqnnaant pgenqiildg aniidgvnii nytqptglai fapnstvtnl
      421 napsvpsssi nignieglvv gnlihvqpnl anqtsavyln vvntsvaskr edtikigpga
      481 sevtryvisg ssprltmren hgdfgsvnia fsgtvlpdea vpdansyavy wdgtnltali
      541 nhggvltrqk ltt
//
LOCUS       WP_258085901             215 aa            linear   BCT 02-MAR-2025
DEFINITION  P2 family phage major capsid protein, partial [Salmonella
            enterica].
ACCESSION   WP_258085901
VERSION     WP_258085901.1
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 215)
  AUTHORS   Linderoth,N.A., Ziermann,R., Haggard-Ljungquist,E., Christie,G.E.
            and Calendar,R.
  TITLE     Nucleotide sequence of the DNA packaging and capsid synthesis genes
            of bacteriophage P2
  JOURNAL   Nucleic Acids Res 19 (25), 7207-7214 (1991)
   PUBMED   1837355
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016981.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05125.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Salmonella enterica"
                     /db_xref="taxon:28901"
     Protein         1..>215
                     /product="P2 family phage major capsid protein"
     Region          8..>215
                     /region_name="Phage_cap_P2"
                     /note="Phage major capsid protein, P2 family; cl04947"
                     /db_xref="CDD:471156"
ORIGIN      
        1 mrpetrfkfn ayltrvaeln gistddvskk ftvepsvtqt lmnkvqessa flqtinilpv
       61 aemkgekigv gvtgtiastt dtsgdderkt adftalesnk yecdqinfdf hlkyktldlw
      121 arfqdfqrri rdaivkrqal dfimagfngt traatsdrtk npmlqdvavg wlqkyrneap
      181 trvmsnitda dgkvvsavir vgrngdyenl dalvm
//
LOCUS       WP_258086112             451 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Xenorhabdus bovienii].
ACCESSION   WP_258086112
VERSION     WP_258086112.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 451)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..451
                     /product="AMP-binding protein"
                     /calculated_mol_wt=50963
     Region          53..451
                     /region_name="MenE/FadK"
                     /note="O-succinylbenzoic acid-CoA ligase MenE or related
                     acyl-CoA synthetase (AMP-forming) [Lipid transport and
                     metabolism]; COG0318"
                     /db_xref="CDD:440087"
ORIGIN      
        1 mkthaisqwl srddcpdspi swqgndsitl rtlrhdvmal ylrmaestat rwalcfedsy
       61 hfcvgllatl hagkipvipg hcreaqlqeq qslfdgvltd lpltlscpcw qlfpnegkid
      121 lpetvlpgia pdavlvlfts gstgvpkqvi ksvsvmdqet qwlaslwgki lqsclirasv
      181 shqhlygltf riwlpmslgl pfertmvefp eqltnnprca lisspaflqq ldqnlpapdc
      241 sfvvsaggpl hfsdaeqvmq wlnitpheiy gctetgimaw rarktddavw ttfsgvsfek
      301 edemgmrvys pllsdpdgma lddrlsfdaq gnftlmgrrd rtvkigekri slsdierrlr
      361 evdgiadtav ltvkrgkrch igavvvldde tyahyqqqgi trfsrywrrq lklwlepval
      421 prywrvvkti plnaqskrsw palqelfnea r
//
LOCUS       WP_258086101             569 aa            linear   BCT 02-MAR-2025
DEFINITION  formyltransferase family protein [Xenorhabdus bovienii].
ACCESSION   WP_258086101
VERSION     WP_258086101.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 569)
  AUTHORS   Chen,P., Schulze-Gahmen,U., Stura,E.A., Inglese,J., Johnson,D.L.,
            Marolewski,A., Benkovic,S.J. and Wilson,I.A.
  TITLE     Crystal structure of glycinamide ribonucleotide transformylase from
            Escherichia coli at 3.0 A resolution. A target enzyme for
            chemotherapy
  JOURNAL   J Mol Biol 227 (1), 283-292 (1992)
   PUBMED   1522592
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012760.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00551.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..569
                     /product="formyltransferase family protein"
                     /GO_function="GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=64361
     Region          11..176
                     /region_name="FMT_core_NRPS_like"
                     /note="N-terminal formyl transferase catalytic core domain
                     of NRPS_like proteins, one of the proteins involved in the
                     synthesis of Oxazolomycin; cd08649"
                     /db_xref="CDD:187718"
     Site            order(16,23..25,77..84,89,98..101,109,129,131..132,
                     135..136)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:187718"
     Site            order(23..24,78..79,99,101,165)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:187718"
     Site            order(77,80,82..84,89,98,131..132,135..136)
                     /site_type="other"
                     /note="putative cosubstrate binding site"
                     /db_xref="CDD:187718"
     Site            order(98,100,136)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:187718"
     Region          203..302
                     /region_name="FMT_C_OzmH_like"
                     /note="C-terminal subdomain of the Formyltransferase-like
                     domain found in OzmH-like proteins; cd08700"
                     /db_xref="CDD:187728"
ORIGIN      
        1 mktmesseny tfviigqgtl avrccqflls igihlevvmp ldsvflswak keglkcinti
       61 qdleslvsnn svewllsisn piiltsalld niklgafnyh daplpkyagt hatswalfam
      121 edkyavtwhr iatvvdagdi avqqnveinr sdtalslnmk cynaafegfk klislikggk
      181 tieyvkqnls ersffssrkr pyagaclqwe hsaeelsalv rglsfgeryr nplcvpkvyl
      241 iniigivktl evlsvsthkq agilvdiaqn fwivttgttd iriefiqltg edlradflad
      301 mlcisvgdsl piinnsdled ltqeheelap yesfwvnrle scrplnfkfd tlyhdldcif
      361 eiyynwnfyi dienvtseer lvnilgafav ylalvndvqy fhldcvtelp khevidysvf
      421 fsasvpfefn idfncsalnl yssisversi lnkfktfhkd iifrypqlrs tesvyskyic
      481 nvrisiidfi nsevkpaasq lyeknnaslt mqidpvkgaf rwisnsshie sadlkrmadh
      541 iisldrllls nsnlplksll sqcgtlgii
//
LOCUS       WP_258086151            1228 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Xenorhabdus bovienii].
ACCESSION   WP_258086151
VERSION     WP_258086151.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024867.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13476.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1228
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..1228
                     /product="AAA family ATPase"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /GO_process="GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /calculated_mol_wt=140997
     Region          1..1228
                     /region_name="PRK10246"
                     /note="exonuclease subunit SbcC; Provisional"
                     /db_xref="CDD:182330"
ORIGIN      
        1 mkilslrlkn inslqgewki dftaepfasn glfaitgptg agkttlldai clalyhetpr
       61 frnnsisatq nelmtrhtae claevefevk giayrafwsq hrarnqaegk lqdpkvelal
      121 kadgkiladk vkgkkekite itgldferft ksillsqgdf aaflnaddkd radlleeltg
      181 teiygilsqe iyqrhkqaqs elniqqatas gielltpeqi ekyqneqqql iaaetqlsqq
      241 ikafqsaeqw lirqdelqqs itsstallqq tertiqdaqp qlqqlaasep aekirslwda
      301 qnrafsekqr vteqrikieh drqqqlsllq pvqqqltdle ktqgehqqkq iqqekliteq
      361 impldhkidt qskdlltlek eitrqnrelt eistqyqvaq nrkdtlhneq ktletyydqh
      421 pycrnldnkl pewkqlfsrq kekqiqiakf tqktqqiste larithhlnt lntelakqte
      481 qnqplhdnli ltekqltdlq kshppeqlqk qlsdyqqqlk sqnqleillp qirqlqttis
      541 inqtqsaqyq alleplpmqi saldqqltek qqhyedladr irleqritsl eqersqlkeg
      601 eacplcgstq hplvaeyqni alsqseerlk slrhqieqlq tnrsalqqkq qiqqqnnqql
      661 qqntaqltek ltettqqwkh hcqqlqaael pmetepvnnf igqrqsaaqq hqrqyeallq
      721 aekahqaaek alsanreqhk aseqtielek vkldshqkql aentaelrqa kteytattel
      781 lvsdlqhtpf alpslqevti wlqqretelk tyhdsrerwq qlqqeqaalq sqsnelekqk
      841 tkltirlhal nekqqqqkql leqttqerhh lfgeqsvsnv rqtlqqktne ldiackqats
      901 hlqqrqnvmn qltgaaseie rnsntaetqc klaasafqsg leqqgfadqs afeqvllepe
      961 qrkklqqlqe qltqhhlqak trhhesetal qrhtetqpql leqyeptqvs tvladvnekl
     1021 khnnqqqgev ktilnsdamr rqkqqtllaq ishlqqnydd wsylnnligs adgakfrrfa
     1081 qgltldhlih lanirleklh grydlqrkde gglelqiidt wqadavrdtk tlsggesflv
     1141 slalalalsd lvsnktqies lfldegfgtl dpetldiald aldhlnasgk tigvishvea
     1201 mkeripvqik vekvnglgvs rlasefrv
//
LOCUS       WP_258086152             544 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Xenorhabdus bovienii].
ACCESSION   WP_258086152
VERSION     WP_258086152.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..544
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=61733
     Region          9..544
                     /region_name="PRK15104"
                     /note="oligopeptide ABC transporter substrate-binding
                     protein OppA; Provisional"
                     /db_xref="CDD:185059"
ORIGIN      
        1 mkinkielmt kkiikslscs iaiimgnmtl syaaiiplgt qladkqeivr nngsepasld
       61 vhkvesdtef niihdffdgl vytdnkgdii pklatswete nnqtwifhlr kgakwsdgsp
      121 itahdvvfsw qrllnpqmgs pygsylvnat vvnandiltg kkqaedlgik alddftlevk
      181 ldrpvgdflq mlahpimviv sektikkygd kwtkpeyfvg sgpfklsewi vnekvigvrn
      241 pqywddkntv inkvtylpls sdkadlnryl ageiditlti plesfpslkk nsgeqiyisp
      301 rlgvyyyefn tqkppfndvr vrqalslavd rdiiankvlg qgqrpaytll ppktggfdfq
      361 qpdyaswtqk qriekaksll neagfnqnnp lrfnllynts eahkkiaiav ssmwkknlgv
      421 davlqnqewk vmldnkyqgk fdvarygwig dynspmsfln ifmsdstqns skysnqnfdk
      481 lvlkagetnk kdyyqqavdi ftddspvitv yyyvnakmvk pylggvyidp rgyvstkdly
      541 iiky
//
LOCUS       WP_258086153             544 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Xenorhabdus bovienii].
ACCESSION   WP_258086153
VERSION     WP_258086153.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..544
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=61607
     Region          1..544
                     /region_name="PRK15104"
                     /note="oligopeptide ABC transporter substrate-binding
                     protein OppA; Provisional"
                     /db_xref="CDD:185059"
ORIGIN      
        1 mkniiakfik nkttkiltcs iaiilaniaq shaavvppgt qladkqeivr nngsfpasld
       61 vhkvesnvel niihdffdgl vytdstgniv prlaeswetk dnqiwifhir kgskwsdgsp
      121 itahdvvfsw qrlldpeigs pyssylgsaf vvnandilsg kkkkqelgvk atddltlevk
      181 lekpvayllq mlthpilvpi sekavkkygd kwmqpdvfvs sgafklsewk vnenvvgvrn
      241 pqywddkntv inkvtylslv sekadlnryl adeiditqsi aldsfaslkk klgdqvhiap
      301 mlstyyyvfn tkkppfddvr vrqalslavd rdviankvlg qgqrpaydii ppntggfnli
      361 ppeaaswtqe qrikkarell neagfnqdnp lqfnllyntr eahkkiaiav tsmwkkhlgv
      421 qanlqnqewk vmldnmhqnk fdvvryawta dynspmsfld tfitgsshni plyensdfdq
      481 mvikagetnd iiyyqkamni ftndmpiipi yyyvsnklvk pyvgglyinp mdyistkdly
      541 iikh
//
LOCUS       WP_258086154             544 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Xenorhabdus bovienii].
ACCESSION   WP_258086154
VERSION     WP_258086154.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..544
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=61635
     Region          5..544
                     /region_name="PRK15104"
                     /note="oligopeptide ABC transporter substrate-binding
                     protein OppA; Provisional"
                     /db_xref="CDD:185059"
ORIGIN      
        1 mqnfmvslik nkiakvltci vslilgsvty syaavipsgt qladkqeitr nnfsepvsld
       61 phksdsssef dilrdfferm vaidkkdkii palaerwetn dnktwvfhlr kgvkwsdgsp
      121 itahdvvfsw rrmvtpdtis pygsylvqat vvnaydvlsg kkkpeelgvk alddatievt
      181 lgrpkadllq mmahpvmspi sekvvkkygn kwtqpeffvs ngpfklsewi vnekivgvrn
      241 pyywddkhtv inkvtylpls dykadlnrym ageldisngg psdffptlkk kfgdqfhisp
      301 imsvyyylfn tqkppfndvr vrqaltlald raiitdkvlg ngqkpafdvv ypgsggiylk
      361 hpdyaswtqv qrvekakall neagfnennp lkftllynts dghkkiaiaa ssmwkknlgv
      421 evvlqnqesk slydtmsqgn fevvryawna dynsptsfld ifttgntnni pkysnkefdq
      481 wvlkadetnn kiyyqraldi ltqdspaipv yyyvrtklvk pyvggvhisp lgdiptkdly
      541 iikh
//
LOCUS       WP_258086197             240 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2884 family protein [Xenorhabdus bovienii].
ACCESSION   WP_258086197
VERSION     WP_258086197.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022551.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11101.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..240
                     /product="DUF2884 family protein"
                     /calculated_mol_wt=26310
     Region          1..240
                     /region_name="DUF2884"
                     /note="Protein of unknown function (DUF2884); cl19726"
                     /db_xref="CDD:450346"
ORIGIN      
        1 mlrriaiaas llfvaqvqag sdcqttiqdd iivtsksvqi vgasgnlril pdgsmlrngk
       61 alslnseqrg kaqqyqqair qdlpwvktea lshltsarqa ldkvvvntmg kesnirnrls
      121 qlesglnkqi dkvletrsdg vafnsqaikk vesegqnliq qslggilqds inemsrkkse
      181 qngdgkqmlm sllgglggmq ngfdaewkkq eqelnrfkge vcskanqleq lrinlmnsik
//
LOCUS       WP_258086198             314 aa            linear   BCT 02-MAR-2025
DEFINITION  siderophore ABC transporter substrate-binding protein [Xenorhabdus
            bovienii].
ACCESSION   WP_258086198
VERSION     WP_258086198.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 314)
  AUTHORS   Delepelaire,P.
  TITLE     Bacterial ABC transporters of iron containing compounds
  JOURNAL   Res Microbiol 170 (8), 345-357 (2019)
   PUBMED   31678562
REFERENCE   2  (residues 1 to 314)
  AUTHORS   Kawano,H., Miyamoto,K., Sakaguchi,I., Myojin,T., Moriwaki,M.,
            Tsuchiya,T., Tanabe,T., Yamamoto,S. and Tsujibo,H.
  TITLE     Role of periplasmic binding proteins, FatB and VatD, in the
            vulnibactin utilization system of Vibrio vulnificus M2799
  JOURNAL   Microb Pathog 65, 73-81 (2013)
   PUBMED   24135791
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11468490
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..314
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=33970
     Region          1..314
                     /region_name="CeuA"
                     /note="ABC-type enterochelin transport system, periplasmic
                     component [Inorganic ion transport and metabolism];
                     COG4607"
                     /db_xref="CDD:443657"
ORIGIN      
        1 mkkilpvvla sllsvtsysa fsqpsvlftp nsvivqsgdf vtvkhlsget qvkknperiv
       61 lfdfgiydsl vklglsdrvi alpvgnapey vrgnmsanmq naggmkepdl eklagmkpdl
      121 ivitgrqgnf ypslskiapt vnldtdskny lssvesnlkl lgelfnkqda vkaqivdlek
      181 tiataqekak ssdskvlvll hnagnlypnn qaivydvvka qraelplptd keksrvvtae
      241 viaqanpdai fiidrskaig ageltkdqfe ndqvkstnay knskivylqs dlwylsgggl
      301 dslarqvnav advl
//
LOCUS       WP_258086210              74 aa            linear   BCT 02-MAR-2025
DEFINITION  (Na+)-NQR maturation NqrM [Xenorhabdus bovienii].
ACCESSION   WP_258086210
VERSION     WP_258086210.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 74)
  AUTHORS   Kostyrko,V.A., Bertsova,Y.V., Serebryakova,M.V., Baykov,A.A. and
            Bogachev,A.V.
  TITLE     NqrM (DUF539) Protein Is Required for Maturation of Bacterial
            Na+-Translocating NADH:Quinone Oxidoreductase
  JOURNAL   J Bacteriol 198 (4), 655-663 (2015)
   PUBMED   26644436
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016299.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04400.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     gene            1..74
                     /gene="nqrM"
     Protein         1..74
                     /product="(Na+)-NQR maturation NqrM"
                     /calculated_mol_wt=8154
     Region          1..67
                     /region_name="NqrM"
                     /note="Na+-NQR maturation protein NqrM [Energy production
                     and conversion, Posttranslational modification, protein
                     turnover, chaperones]; COG2991"
                     /db_xref="CDD:442230"
ORIGIN      
        1 mevfiaafif fllafagmal gyifkrksiq gscgglgsig vekvcdcpep cdtrkkrlar
       61 eaarheklek nrif
//
LOCUS       WP_258086220            2175 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Xenorhabdus bovienii].
ACCESSION   WP_258086220
VERSION     WP_258086220.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 2175)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2175
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..2175
                     /product="AMP-binding protein"
                     /calculated_mol_wt=241328
     Region          <199..>1926
                     /region_name="PRK12316"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237054"
ORIGIN      
        1 mkikqevaem htndpivmna rkqafkdyvr qqldtdyqgc pffvtrlats gtdtevvtts
       61 ftfaeplnsr iftmaasplh rlslfsacik ylaflhcrep egslnwaiga qdiagngtpa
      121 vlsddrsagv ylvpakwhla eteltqpvkr lfgeelaqwk qvaaltsgip lqsassvmsq
      181 spqilagyse tqppfegtet acyslslwlq aspektclhm rfdsqrvdae ltsllidrlt
      241 lllnsmvfep nsplasmpwm pdqerervaa lsapvpaqpl ryknvaqamt asmrdraetr
      301 fleagdqtvn fkqlerytdn lltdpdlpqw eslgdcvliv gakgvettla amacirigkp
      361 fclqsysape rqlldiielh stkvvllqes ygemvgffrt qgcqvvmlpy yvpaklthrt
      421 emsalaallr kgeavnpddp lcvvmtsgse gkpkgcinth qallnlsaek qtlhraagsr
      481 vasvanhtfd yfvlecvqcl tqdivlvmpp eetrtdaekc vrflrescid llftttvlae
      541 yimeqgdipn lrqlyfgges lrtfqknnye lfnvygpset gvittylslv rndqkitigk
      601 plggcqcvvv fpdslepcpi gvagelligg igvgmgyinr pdltekvfvd ldtewlkgky
      661 yrsgdlccwn vqgeieiegr rdrqlkvngf rveldaiekn ildlptvaqa avigiedqrg
      721 hahlgtfivt tdsgvteqni reallsrmpa ymvpsqvilv aelsltrngk ldrqglkqaf
      781 gkamsgkivr pdsatqewla acwarylele vdalsvdksf fslgghslra arvlaeiqhe
      841 fgqvvsllef fqndtieala ktidarrtgg dsmvtesfss lletapqfav ggrgplsaqe
      901 vrlyaqyrlh pesqayilal eiplshdlfp davkqalqal idrhdilrtr yridsegipy
      961 aeilpslpvd rvliddrnqw lqmraqafel geapllrgcl qeintehacl qlqihhilvd
     1021 kpsleilqre fqqllahesl apvalsyrcy alaladarqh lvwtqaetfw anyleglefn
     1081 pfghgavdag skvktlswhl saadmaavkr lcgavnvtpa mlflsvwglt varegssnaf
     1141 sisvanafrp knaletvgmf vslspcafrf dqpaetfdrf ikkladeqwr avdqlffpve
     1201 eafallsrdp rmfgrnplln vaysyldage nealdaedll leahgplslt vshrtqgiqn
     1261 tqscrltley qiaaftdsqi eaivtgyqei lrqilshaps alpidelivs adavkkafrp
     1321 vqrrasyrqi damlingflt ltdrpavide edvvtweefa altaaytqvl nkgtirrali
     1381 lgrqgrqlqa flaacfltht tylaletgtp eerinevirh aepdlvikcg seigaqlqdd
     1441 sliepvsinw rgfhsmksad dnpigwvlys sgttgkpkgi cvaahtaaqy vdslvnklgl
     1501 kqqlqatqqg lrivqqfsps fdgyleevll swalqgtsvv vdrysllder karafllhyr
     1561 pdvisaapal fsawnrmpal aplpkicisg gdflaagdis qllertqiwn sygptetcia
     1621 vsmvncaqla sgaalsigep fdhaafavin qdggrlrvgq wgelviygdf erhgylndpa
     1681 ltarkfgrda qgtffrtgdl amagknglfy lkgrmddsck vrgnfiglge lenragqhpd
     1741 viaagaavaf agtpeaclvl avegkenmqs dlqqhlarhy prshlpsaif pvaslprtet
     1801 gkldrqriva lflewreyty qtqeeqaatm geglqklitc wreclgykga ltqdsdfflv
     1861 sgsslnavrl anqletrfgv tfspvdvfrn atlgeqwsli narqgahdtm pvkllqerfl
     1921 nsddpniakl illppalggl ielqtladkl agrvtvsvlt tepravenls vqefkqalln
     1981 altlhikaqd ihpsrslwlg gyslgaemlv allaqqsess phfsqyidkl vfldpnlrtn
     2041 vfegdelyae fvaffrdvnr lafdcagida dmdvetlrrq fpslhqewry yqlqhqilen
     2101 ktfherilal psenlpvtmf fsddadeagi dgltqkmkgc ctvrrksgdh vefvkqltsd
     2161 dfidleqgkt lcvqk
//
LOCUS       WP_258086286             294 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Xenorhabdus bovienii].
ACCESSION   WP_258086286
VERSION     WP_258086286.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024871.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13480.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..294
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /calculated_mol_wt=34125
     Region          4..293
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
ORIGIN      
        1 makikpfllg wkrcnferyk daytllggsv sthpnivsfl nekldnelff yikehsssiv
       61 gayftcvnnk laaslqkkyp flydeiifpi skdvkiifpe kskrlsllhk gnivnasytl
      121 fnkrkiclik dsfsyktrrn rsneinkfkr aggeirpsse fsaeelvniy vdlyqkrwdy
      181 nhsaeqrkhl lemytelreh ifgyvlling npcaydfvlr adspkwisfd ainggydpey
      241 adlsvgsilm wvntqeakaq cqeadktmry slgnptfeyk nrwcvtlplg kvif
//
LOCUS       WP_258086296             403 aa            linear   BCT 02-MAR-2025
DEFINITION  oligosaccharide flippase family protein [Xenorhabdus bovienii].
ACCESSION   WP_258086296
VERSION     WP_258086296.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 403)
  AUTHORS   Yao,Z. and Valvano,M.A.
  TITLE     Genetic analysis of the O-specific lipopolysaccharide biosynthesis
            region (rfb) of Escherichia coli K-12 W3110: identification of
            genes that confer group 6 specificity to Shigella flexneri
            serotypes Y and 4a
  JOURNAL   J Bacteriol 176 (13), 4133-4143 (1994)
   PUBMED   7517390
REFERENCE   2  (residues 1 to 403)
  AUTHORS   Becker,A., Kleickmann,A., Kuster,H., Keller,M., Arnold,W. and
            Puhler,A.
  TITLE     Analysis of the Rhizobium meliloti genes exoU, exoV, exoW, exoT,
            and exoI involved in exopolysaccharide biosynthesis and nodule
            invasion: exoU and exoW probably encode glucosyltransferases
  JOURNAL   Mol Plant Microbe Interact 6 (6), 735-744 (1993)
   PUBMED   8118055
REFERENCE   3  (residues 1 to 403)
  AUTHORS   Popham,D.L. and Stragier,P.
  TITLE     Cloning, characterization, and expression of the spoVB gene of
            Bacillus subtilis
  JOURNAL   J Bacteriol 173 (24), 7942-7949 (1991)
   PUBMED   1744050
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014051.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01943.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..403
                     /product="oligosaccharide flippase family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=45392
     Region          7..397
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 mnikkeilsn iislssinim gmlipiitmp ilaralgsdl ygqyllfmti lifghtiidy
       61 gvqytgvrdv aqnrknsili keyyagyqtv rwilglsyil iitlysslfm nnditywifi
      121 agipyflgyi ltsswffqai gktkflmyss fvarivnliv iisiaatpes itilvisatw
      181 pvlicglilf wrlkknynvs llgfskikky fenglntfig ilapnlynai piiimgsiaa
      241 phefakfsva tkiceiittf qdviaksiyp alsmnnrnhl nkiilinilv slpifmviyf
      301 lgdyilemfl ghnfsdntyl kiisigmvfv gianaygqgf flpkgldiiy rtisirvsil
      361 ssvisiiliy nyqilggaia itiarllfvi dyhlvykklg htl
//
LOCUS       WP_258086414             106 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase [Xenorhabdus bovienii].
ACCESSION   WP_258086414
VERSION     WP_258086414.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 106)
  AUTHORS   Urbach,C., Evrard,C., Pudzaitis,V., Fastrez,J., Soumillion,P. and
            Declercq,J.P.
  TITLE     Structure of PBP-A from Thermosynechococcus elongatus, a
            penicillin-binding protein closely related to class A
            beta-lactamases
  JOURNAL   J Mol Biol 386 (1), 109-120 (2009)
   PUBMED   19100272
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024748.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13354.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..106
                     /product="serine hydrolase"
                     /GO_function="GO:0008800 - beta-lactamase activity
                     [Evidence IEA]"
                     /GO_process="GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=11940
     Region          2..>72
                     /region_name="PenP"
                     /note="Beta-lactamase class A [Defense mechanisms];
                     COG2367"
                     /db_xref="CDD:441934"
ORIGIN      
        1 meknangrlg vvliytadhs iityrgherf plcstskmma vsallkkset dkdllnqrih
       61 yqqsdiveys pirgplgkrk lshaktafct iryrlcvmdd isrtpa
//
LOCUS       WP_258086433             572 aa            linear   BCT 02-MAR-2025
DEFINITION  carbamoyltransferase C-terminal domain-containing protein
            [Xenorhabdus bovienii].
ACCESSION   WP_258086433
VERSION     WP_258086433.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 572)
  AUTHORS   Parthier,C., Gorlich,S., Jaenecke,F., Breithaupt,C., Brauer,U.,
            Fandrich,U., Clausnitzer,D., Wehmeier,U.F., Bottcher,C., Scheel,D.
            and Stubbs,M.T.
  TITLE     The O-carbamoyltransferase TobZ catalyzes an ancient enzymatic
            reaction
  JOURNAL   Angew Chem Int Ed Engl 51 (17), 4046-4052 (2012)
   PUBMED   22383337
REFERENCE   2  (residues 1 to 572)
  AUTHORS   Jabbouri,S., Fellay,R., Talmont,F., Kamalaprija,P., Burger,U.,
            Relic,B., Prome,J.C. and Broughton,W.J.
  TITLE     Involvement of nodS in N-methylation and nodU in 6-O-carbamoylation
            of Rhizobium sp. NGR234 nod factors
  JOURNAL   J Biol Chem 270 (39), 22968-22973 (1995)
   PUBMED   7559434
REFERENCE   3  (residues 1 to 572)
  AUTHORS   Coque,J.J., Perez-Llarena,F.J., Enguita,F.J., Fuente,J.L.,
            Martin,J.F. and Liras,P.
  TITLE     Characterization of the cmcH genes of Nocardia lactamdurans and
            Streptomyces clavuligerus encoding a functional
            3'-hydroxymethylcephem O-carbamoyltransferase for cephamycin
            biosynthesis
  JOURNAL   Gene 162 (1), 21-27 (1995)
   PUBMED   7557411
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028171.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16861.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..572
                     /product="carbamoyltransferase C-terminal
                     domain-containing protein"
                     /calculated_mol_wt=63992
     Region          12..564
                     /region_name="COG2192"
                     /note="Predicted carbamoyl transferase, NodU family
                     [General function prediction only]"
                     /db_xref="CDD:441795"
ORIGIN      
        1 mkeivlaini pilvdgsvty dgnvvladrn qvimaiaeer vskkkydgqv tnavkeilyr
       61 nkltlddlsa isvvsfgqpm tssgamannl kkyldslflg fekihivksh hvahamsavc
      121 qtdvkralvv vadhtgniig eitdtkvlen nsaeqvsyyl yenndlklla qdntqpcdqg
      181 ygrfygdvtc ylgfdsyres gktmglasfg dpavfscypa ftetktgvvs elkdenyvyd
      241 ctkdiqnwfr kqgvhiperr hkagvirpfd mhlaawaqdq lqksiinrvk elinkyhidt
      301 vcvtgcvamn svmnrkleee lninvyvpps pgdaglalga aaeyfwkqdk kipkfnsspy
      361 lgpvysedei lesifsykne fvtqkvndpe yqaarmiang kiigwfqdrs eygpralgnr
      421 silasasnsw tkeilnsqik lrewfrpyap vvleekadiy fnmlspvpym mkvapvkaqa
      481 rldipacihv dgtarlqtvs atsnqkfynl ikeldkitgi pvvlntsfnl agmpivespv
      541 daincfrqsi gmdalfigny clekntlfnk ni
//
LOCUS       WP_258086479             497 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein [Xenorhabdus bovienii].
ACCESSION   WP_258086479
VERSION     WP_258086479.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 497)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..497
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=53601
     Region          19..497
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     Site            order(167..171,179,194,196..197,245..248,251,254..255,
                     270..272,304,401,403,429,467)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143395"
     Site            order(171,270,301,304)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143395"
ORIGIN      
        1 mseitllkpv tdflqrphgh yinglsipgq gnntfsvvnp asdeviakvn rgeeaelnla
       61 meaaskafhg swaqtspmer gnclnrladl lqkhgeelaq leslcsgkpi qlsrmldvga
      121 sadylryfag wsskisgetl nvslpslkge kytaftrrep igvvvgiipw nfsimiaiwk
      181 lgaalacgct lvlkpseytp ltmlrvaela keagipdgvi nvvngsgarv gsallahpqc
      241 akvtftgsvp tgtiigksai eygltratle lggknaaafl sdmsvekivd gvleagylnq
      301 gqicaaaerf yipsvhmdav lkllserlsa mkigspldes temgplanke hyekilslfe
      361 karqdgseiv ygghalegeg ffvaptiira ksaedtlmqe etfgpigtfl syddeeeliv
      421 mmnatpfgls aslwtndlsk amrmipriqv gtlwinmhtf ldpavpfggv kssgigrefg
      481 safiehytel ksvmvry
//
LOCUS       WP_258086528             164 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Xenorhabdus bovienii].
ACCESSION   WP_258086528
VERSION     WP_258086528.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 164)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..164
                     /product="AMP-binding protein"
                     /calculated_mol_wt=17978
     Region          <1..159
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
ORIGIN      
        1 mtetcagsiy srefpegdan kefsslgqpv lslqmrvsde tgllekpgai gelelhgpmi
       61 ftcyynneea trssftedgw frtgdlaqie ngklhlvghn kdsiivsgvn yfsheleivl
      121 eqltgieksf vaafptrpag sdteqlvvaf atsfplpddd klyh
//
LOCUS       WP_258086687             986 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Xenorhabdus
            bovienii].
ACCESSION   WP_258086687
VERSION     WP_258086687.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 986)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..986
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..986
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=112211
     Region          73..986
                     /region_name="TonB-hemin"
                     /note="TonB-dependent heme/hemoglobin receptor family
                     protein; TIGR01785"
                     /db_xref="CDD:273807"
ORIGIN      
        1 mayrvkiqlt pitialslaf sltapplfae pkstvtspsk qtdlgkirvt dnsdkdeagh
       61 davydkdisn iyigkeqier ykgaspadli kgavgvysgd arnsgaldin irgiqgqgri
      121 pvtidgteqa itvgrgynga nnrnyidpnl issieiekgp slsrnikgsi ggavviktlt
      181 iddvvpkget fgintkvets snsvrerkps lalgqdyrdv pdfiqngvet dpelkitphs
      241 skdnkfpgfk dnafrvalgt rqeyfdlmla ysyrrqgnyf agkggahryd npitetdrql
      301 mkdvrttldp ylpfaariyq pgnevpntss emssvliknt wrftddqalq lgfrntrmef
      361 gdimpsrlgw ikpeenmvpq wplanvhqqa anltykwqpt dnpyvdfdin lwitrttsnt
      421 ntaggyprsp inrdfnwekd vkvgsrdsni ngtlidtait nsqnnrwgid isnkfeltry
      481 ldltlmgnfq herlnsnddy nstnlyffqs parkgqrqei nlafnfdwrp tswlalsaga
      541 krvsywsqdh llnerraard dryqkeketi ghemsywrtp teeeasyfkk rwddeyyskl
      601 srkekkelrh kaeeinsktd rdehtrrmvs ekftwlydss sgklnksdnp yfngqldmne
      661 kvidpisgke aykyeygara saanvisgsn vddpwepask rkdhawaptf satayitddf
      721 riytryaeav rmpsifedtv gfsgnkgnrv gqkfkperak ttevgfvydf sqlvdaerha
      781 dikmsyyniv ienvfdrdnt yefsqmdkqk iaglelqary dngsfftdmg ltynlknkvc
      841 dnnsslrmns lnrhdipeci dggfaggylr tsiqprysan ltvggrlfde klelgsrily
      901 hskaenkdek wlmetlpdvy kgqsnnpmrw npvltvdayv syqitptlsm eltgtnltnr
      961 yyldpltrsm ipapgrtfkl sitsqf
//
LOCUS       WP_258086723             453 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein [Xenorhabdus bovienii].
ACCESSION   WP_258086723
VERSION     WP_258086723.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 453)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..453
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=48942
     Region          20..451
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     Site            order(119..123,131,146,148..149,201..204,207,210..211,
                     221..223,255,346,348,376,421)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143395"
     Site            order(123,221,252,255)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143395"
ORIGIN      
        1 mtinenidit vqqtetasyi dklvdqgkia qkelekqsde didnglhhla kifsthcrew
       61 aekelavtri gnaddkehkl alvvnqvfkg lygtktygrl ggtqrlieya spvglifavv
      121 pltnpipnsl fkimlsiktr naiifsypgk tgklanefid lvqqvltehg lpvslvqvct
      181 ppshdkthml mqhpgvdmil atggrnlvha ayssgkpafg vgpgnvpvyi srsahipkta
      241 anivngkiyd ngivcgsesn livhpasknd lisaleanga ailtsseveq aiqtlfnpet
      301 qyvsrenigv caaslaakan israypikll vipaeigrnd flsnekmapi ltlytadeen
      361 gislayslic negaghtavi hsedpdeihq fstvmpagri lvntsatqgm lgettelpvs
      421 fmqgsgtfgh nhstdpiiwk hlvnikrvay glh
//
LOCUS       WP_258086735             513 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA translocase FtsK, partial [Xenorhabdus bovienii].
ACCESSION   WP_258086735
VERSION     WP_258086735.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 513)
  AUTHORS   Massey,T.H., Mercogliano,C.P., Yates,J., Sherratt,D.J. and Lowe,J.
  TITLE     Double-stranded DNA translocation: structure and mechanism of
            hexameric FtsK
  JOURNAL   Mol Cell 23 (4), 457-469 (2006)
   PUBMED   16916635
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036827.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17854.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         <1..513
                     /product="DNA translocase FtsK"
     Region          <1..512
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
ORIGIN      
        1 qsslfhpflm rndqplpkpt tpmpsldlla kppaeeepvd mfaleqtsrl ievrlndyri
       61 kadvvgfspg pvitrfeldl apgvkasris nlsrdlarsl savavrivev ipgkpyvgle
      121 lpnkkrhtvy lrevldcekf rdnpspltiv lgkdiagqpv vadlgkmphl lvagttgsgk
      181 svgvnamils ilykakpedv rfimidpkml elsvyegiph lltevvtdmk daanalrwcv
      241 nemerryklm salgvrnlag yndkikqaen mgrpipdpfw kpgdsmdvth pmlkkepyiv
      301 vmvdefadli mtvgkkveel iarlaqkara agihlvlatq rpsvdiitgl ikaniptria
      361 ftvsskidsr tildqggaes llgmgdmlyl apnssipvrv hgafvrdqev hevvndwkar
      421 grpqyidsii kggedgeggl gldsdeeldp lfdqavqfvt ekrrvsisgv qrqfrigynr
      481 aariveqmea qqivstpghn gnrevlappp heh
//
LOCUS       WP_258086967             178 aa            linear   BCT 02-MAR-2025
DEFINITION  Rha family transcriptional regulator [Xenorhabdus bovienii].
ACCESSION   WP_258086967
VERSION     WP_258086967.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 178)
  AUTHORS   Iyer,L.M., Koonin,E.V. and Aravind,L.
  TITLE     Extensive domain shuffling in transcription regulators of DNA
            viruses and implications for the origin of fungal APSES
            transcription factors
  JOURNAL   Genome Biol 3 (3), RESEARCH0012 (2002)
   PUBMED   11897024
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021206.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09669.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..178
                     /product="Rha family transcriptional regulator"
                     /calculated_mol_wt=20676
     Region          14..>121
                     /region_name="pRha"
                     /note="Phage regulatory protein Rha [Mobilome: prophages,
                     transposons]; COG3646"
                     /db_xref="CDD:442863"
     Region          123..174
                     /region_name="ORF11CD3"
                     /note="ORF11CD3 domain; pfam10549"
                     /db_xref="CDD:287514"
ORIGIN      
        1 mnyptvvngi dfrdlvfmsg qetetdtfkv akvfkrehkd vlrktrsvik scspefaern
       61 ftlchennel qngkpqpfyq mtkdgwmmlv mgftgaeair fkeafiaafn wmanvikkna
      121 hsmeqernav mleymkekdv asmsgrllrr wgqekkpqll hriaqieekg qmklgfne
//
LOCUS       WP_258086792             580 aa            linear   BCT 02-MAR-2025
DEFINITION  type VI secretion system baseplate subunit TssF [Xenorhabdus
            bovienii].
ACCESSION   WP_258086792
VERSION     WP_258086792.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 580)
  AUTHORS   Coyne,M.J., Roelofs,K.G. and Comstock,L.E.
  TITLE     Type VI secretion systems of human gut Bacteroidales segregate into
            three genetic architectures, two of which are contained on mobile
            genetic elements
  JOURNAL   BMC Genomics 17, 58 (2016)
   PUBMED   26768901
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 580)
  AUTHORS   Brunet,Y.R., Zoued,A., Boyer,F., Douzi,B. and Cascales,E.
  TITLE     The Type VI Secretion TssEFGK-VgrG Phage-Like Baseplate Is
            Recruited to the TssJLM Membrane Complex via Multiple Contacts and
            Serves As Assembly Platform for Tail Tube/Sheath Polymerization
  JOURNAL   PLoS Genet 11 (10), e1005545 (2015)
   PUBMED   26460929
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 580)
  AUTHORS   English,G., Byron,O., Cianfanelli,F.R., Prescott,A.R. and
            Coulthurst,S.J.
  TITLE     Biochemical analysis of TssK, a core component of the bacterial
            Type VI secretion system, reveals distinct oligomeric states of
            TssK and identifies a TssK-TssFG subcomplex
  JOURNAL   Biochem J 461 (2), 291-304 (2014)
   PUBMED   24779861
REFERENCE   4  (residues 1 to 580)
  AUTHORS   Zhou,Y., Tao,J., Yu,H., Ni,J., Zeng,L., Teng,Q., Kim,K.S.,
            Zhao,G.P., Guo,X. and Yao,Y.
  TITLE     Hcp family proteins secreted via the type VI secretion system
            coordinately regulate Escherichia coli K1 interaction with human
            brain microvascular endothelial cells
  JOURNAL   Infect Immun 80 (3), 1243-1251 (2012)
   PUBMED   22184413
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017733.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05947.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..580
                     /product="type VI secretion system baseplate subunit TssF"
                     /calculated_mol_wt=66152
     Region          4..567
                     /region_name="T6SS_TssF"
                     /note="Type VI secretion system, TssF; cl15462"
                     /db_xref="CDD:472810"
ORIGIN      
        1 mksfeyyyqr efdylrqlak ivseenphlr dvlgggdpdv erlfegasvl tarleqkied
       61 gfpeltrpll qklraqplkg lpatsiiqfd shgqgdsdfs ipagtevyte agqpfvmcrl
      121 cpvapltlvs reiihqiqat kiilkfrytg keaewqtrpi slflssdepv adilmlglmq
      181 yytdaelhhn gqvykaqger fearfgasrl tlssakddnw apqlliesly lphinqfldl
      241 plpimakqlk laehrefsve ltlntllpls aeqiesafql hcapvvnmer ncqvtlpfaa
      301 etaryplpla pnqgilhiag ielknepgse eehrgneylf ypaslltgme ryhpeydnag
      361 fygletphde wnrvryqvvf ydregklmhk ppecefichf ygfeqnlppl tsgaislgge
      421 nvpeilqlkn imptsrtypp itdslrywdf lshyaigsya lesvesvrql lqdfdlypeg
      481 drpgsrsirr midgisnita kwgdrlirgr pvrcllitle mdesayssag emyrfansly
      541 qffpfclaqg swlrmrvisq psgtewylsp smlegyrsim
//
LOCUS       WP_258087074             461 aa            linear   BCT 02-MAR-2025
DEFINITION  M28 family peptidase [Xenorhabdus bovienii].
ACCESSION   WP_258087074
VERSION     WP_258087074.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016289.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04389.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..461
                     /product="M28 family peptidase"
                     /calculated_mol_wt=50713
     Region          51..442
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mncttkimsl espqpfskss lwrhcrfvav islflpalaa ataspvitsn kvdivlqhiq
       61 klqeiadtng gnreagssgh aesvqyfseq lrnaglnvwi ekfeflyskp ehaqlvhngg
      121 mldlvpavfs pstpgpinas phfisgdgcd kqqyfnvprg siviikesth cttqhqhrla
      181 sesgartaii ashtetplym wlegaghrdi plvgisqpty vkinsdpsil ildvlmvtgr
      241 rwsmnliaen sgtsdapave vgahldsvpq gpgindnats avllldhats nanqpnarty
      301 rymfwsgeef afsgsrsylq tvtkpdriya yvnlemqtsp nsgyfytrdp ngrdvsqris
      361 nsiieayqql gieaytdtnt iprsddssyk dagiptgglw ggsfeiktre qaikwggqag
      421 ypfdgcyhrp cdnygrldkk klheaqfvlh hilakldday d
//
LOCUS       WP_258087120             567 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Xenorhabdus bovienii].
ACCESSION   WP_258087120
VERSION     WP_258087120.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 567)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..567
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=62747
     Region          1..567
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(304..305,308..309,312,315..316,318..319,322,
                     325..326,329,332..333,336..337,340,343..344,346..347,351,
                     353..354,357,360..361,364..365,368,371,374..375,378,382,
                     385,392,396,399,402..403,406,409..410,413..414,416..417,
                     420..421,434..435,438,441..442,445,448..449,451..452,
                     455..456,459,462..463,466,469..470,472..473,476..477,
                     479..480,483,486..487,490,493..494)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            374..407
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 mfnrmkivtg lisviilfga lqfisgglff nglkndteaf dlldkmrqqq klldeswinl
       61 lqarnnlnrv giiymmkerd ldgtyqiddv laeskvnlar gerrfeqfeq lkklpihdpd
      121 hlqrlkqthh eylnalkeld gflakkqyke ffaqkttdyq nafnveydyy lnqdqklyde
      181 vareadiayr niiislisvf vllilvmavs wislrkalin plnkllenik afskgdltqt
      241 invsgtnemg mlavglrhmq delihtvrsv hqstetiytg tseiaagnnd lssrteqqva
      301 sleetaasme qltatvkqna dnarqasnla dnasdiarqg gkvvanvvqt mhdiadssrk
      361 isditgvida iafqtnilal naaveaarag ehgrgfavva gevrnlaqrs aeaakeiksl
      421 iedsvdrtdt gsvlvesage tmnkivdsvt rvtdimgeia sasdeqsrgi tqvgvaisem
      481 drvtqqnasl veqsaaaaaa leeqamiltk avalfqlpeq aerkqsekrk hevlstiksp
      541 tppanktnpp mlkkgsnved psnwetf
//
LOCUS       WP_258086192             995 aa            linear   BCT 02-MAR-2025
DEFINITION  inverse autotransporter beta domain-containing protein [Xenorhabdus
            bovienii].
ACCESSION   WP_258086192
VERSION     WP_258086192.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 995)
  AUTHORS   Leo,J.C., Oberhettinger,P., Schutz,M. and Linke,D.
  TITLE     The inverse autotransporter family: intimin, invasin and related
            proteins
  JOURNAL   Int J Med Microbiol 305 (2), 276-282 (2015)
   PUBMED   25596886
REFERENCE   2  (residues 1 to 995)
  AUTHORS   Fairman,J.W., Dautin,N., Wojtowicz,D., Liu,W., Noinaj,N.,
            Barnard,T.J., Udho,E., Przytycka,T.M., Cherezov,V. and
            Buchanan,S.K.
  TITLE     Crystal structures of the outer membrane domain of intimin and
            invasin from enterohemorrhagic E. coli and enteropathogenic Y.
            pseudotuberculosis
  JOURNAL   Structure 20 (7), 1233-1243 (2012)
   PUBMED   22658748
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023351.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11924.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..995
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..995
                     /product="inverse autotransporter beta domain-containing
                     protein"
                     /calculated_mol_wt=110066
     Region          39..>614
                     /region_name="Ve_IatC_Nterm"
                     /note="inverse autotransporter adhesin IatC N-terminal
                     domain; NF040978"
                     /db_xref="CDD:468908"
     Region          140..415
                     /region_name="IAT_beta"
                     /note="Inverse autotransporter, beta-domain; pfam11924"
                     /db_xref="CDD:432192"
     Region          <709..>993
                     /region_name="PRK15316"
                     /note="RatA-like protein; Provisional"
                     /db_xref="CDD:185216"
     Region          859..993
                     /region_name="InvE_AD"
                     /note="Adhesion domain; pfam05689"
                     /db_xref="CDD:428588"
ORIGIN      
        1 mhrkfdkswp qnqppllkrm awaniiiqlt lpvagaftpi iaaakthtts hdqqltalpt
       61 kpyilksget idliakrysl tvddlkkinq lrtfsksfst lgigdeidvp rprlnkflpf
      121 nyspldesds kdgtnsrlsn aairvgdvlk snnisnsaki qlnglavsev nqqiqnwlgh
      181 ygtarvqani sdrgrldgsq ldmllplydt ksqltftqfg lrrlnkrntv nlgvgqrrff
      241 dggmlgynaf fdhdftgent rwgigaeyar nylklgangy frlsnwkesh lltdyderpa
      301 ngfdlrvqgy vptlpqlggk lmyehyfgse vglinqnhrq kdpsaftvgi nytpiplltf
      361 givrkqstsg ggetqfnmel nyeigtpwek lidpdatdfk rtlqgsrydl vdrnnqivle
      421 yrkreiirlt mdslitghag dikplhltvd skyglkniqw eavnlfadgg eierqggshy
      481 lltlpeyhhq gnntyilsav aydehgnasq rvetqvqvlp aavrdnkstf takdnellad
      541 drattmlklt ledkegkpir dvagdikwvt nqlsgegsdp tigkiketqs gvyeailtag
      601 kkigilkitp evdgvhikpl kiifvhpdap fvknltivgk leigqklsat ytfnpnggek
      661 vdksryiwgd kgniditngh tivesgklpn yalelsdagr vkavavqaqn glgligntmi
      721 vntsmsqesg nrthggsegg kvrgiaddia atvntdntkk snaitltvkt fkhgqpvrnv
      781 avevqatqai nrqnkpqtit lliggkpaly qgvtdeqgvl sipvtdpngn gvktalkita
      841 ygsakpktqd liftvptspd tplanfwghm sesvmganga vfmrpqlqie lkgnmkgmat
      901 ffesgeiwpr rvyrgakwyc gkihanlptq edlqslyray sanemhdlhg wpqhrsyrss
      961 tpaegnkvhi avnidngiah piednivsdy vicrq
//
LOCUS       WP_258087240             296 aa            linear   BCT 02-MAR-2025
DEFINITION  phage terminase small subunit [Xenorhabdus bovienii].
ACCESSION   WP_258087240
VERSION     WP_258087240.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 296)
  AUTHORS   Linderoth,N.A., Ziermann,R., Haggard-Ljungquist,E., Christie,G.E.
            and Calendar,R.
  TITLE     Nucleotide sequence of the DNA packaging and capsid synthesis genes
            of bacteriophage P2
  JOURNAL   Nucleic Acids Res 19 (25), 7207-7214 (1991)
   PUBMED   1837355
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017731.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05944.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     gene            1..296
                     /gene="gpM"
     Protein         1..296
                     /product="phage terminase small subunit"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_process="GO:0019069 - viral capsid assembly [Evidence
                     IEA]"
                     /calculated_mol_wt=32794
     Region          32..256
                     /region_name="Phage_term_smal"
                     /note="Phage small terminase subunit; cl19614"
                     /db_xref="CDD:450336"
ORIGIN      
        1 mkiflsrvpr aaanksldev peyagtvrgg mmltpaqehw qkvmasrrge egmtsealta
       61 yeqvlhrlrf dqarlsdlqs terkidykrt vlesydgwie gvlgsdtgla devlttvmiw
      121 qmdvghydra lttadyvirh nlplpdryrr tvgsllvdei cdkaltifsa gdatvdpvpl
      181 ailerlaelv tpldmpsqve aklfktlayt lrlsperedk aralslmqqa llrfvnigvk
      241 kdiealtrel kktaegdsas sdntvmpppk ttpatagkka dksktrttav kakssr
//
LOCUS       WP_258087242             548 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase large subunit domain-containing protein, partial
            [Xenorhabdus bovienii].
ACCESSION   WP_258087242
VERSION     WP_258087242.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 548)
  AUTHORS   Baumann,R.G. and Black,L.W.
  TITLE     Isolation and characterization of T4 bacteriophage gp17 terminase,
            a large subunit multimer with enhanced ATPase activity
  JOURNAL   J Biol Chem 278 (7), 4618-4627 (2003)
   PUBMED   12466275
REFERENCE   2  (residues 1 to 548)
  AUTHORS   Lang,A.S., Taylor,T.A. and Beatty,J.T.
  TITLE     Evolutionary implications of phylogenetic analyses of the gene
            transfer agent (GTA) of Rhodobacter capsulatus
  JOURNAL   J Mol Evol 55 (5), 534-543 (2002)
   PUBMED   12399927
REFERENCE   3  (residues 1 to 548)
  AUTHORS   Mitchell,M.S., Matsuzaki,S., Imai,S. and Rao,V.B.
  TITLE     Sequence analysis of bacteriophage T4 DNA packaging/terminase genes
            16 and 17 reveals a common ATPase center in the large subunit of
            viral terminases
  JOURNAL   Nucleic Acids Res 30 (18), 4009-4021 (2002)
   PUBMED   12235385
REFERENCE   4  (residues 1 to 548)
  AUTHORS   Lang,A.S. and Beatty,J.T.
  TITLE     The gene transfer agent of Rhodobacter capsulatus and 'constitutive
            transduction' in prokaryotes
  JOURNAL   Arch Microbiol 175 (4), 241-249 (2001)
   PUBMED   11382219
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015211.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03237.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         <1..548
                     /product="terminase large subunit domain-containing
                     protein"
     Region          1..548
                     /region_name="P"
                     /note="terminase ATPase subunit; Provisional; PHA02535"
                     /db_xref="CDD:222859"
ORIGIN      
        1 qiakrlgvsa ntlyswrrrd kwdeanpier vsdelhvkil riqakealtp hdfktldffy
       61 rqlerfdrhe vkkestkkak tpknhfteeq iaalraqvye slfeyqkrwy tqknrrnrmi
      121 lksrqigatw yfarealita letghnqifl sasraqafqf kkfiqmvarq vgvelkggde
      181 iilsngatly flgtsaataq sytgdlyfde ffwvsnfmel rkvaagmatq tglrrtyfst
      241 psseehegyp fwtgdffnks rshkkqitld lshktlqpga lcgdniwrqi vtihdaialg
      301 lnrvdlaeie senspedfdn lyrclfvkag erafdynsli qcgvdgyned vwpdwkpyap
      361 rplghkgvyi gadptgtggn gdglglavms ppavsggkwr viealrfrgm afekqaeeir
      421 klteryhvlg itldgtggtg eavhelvckf fpaatllkys aalkrmlvmk aqmlirsgrf
      481 eydagmqqva tsfmsikkii tqggivtyda drtrgvdhgd iawsimnvlh gepiasdsgg
      541 hqsfvsef
//
LOCUS       WP_258087265             392 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2515 family protein [Xenorhabdus bovienii].
ACCESSION   WP_258087265
VERSION     WP_258087265.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10720.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..392
                     /product="DUF2515 family protein"
                     /calculated_mol_wt=44551
ORIGIN      
        1 mveifkkhky ddmelykstq svaacdchfe ekdgkqikvi dvpiltcecv wrryqkeaed
       61 ivapggklia dpkernkrin qayakiwled nrfqwaglaa faskqvgcgl lhaselieki
      121 qaeydaiqrs senagkgkik wsipglitvh entnsaqtkr eleqvhennp vplfdarsrd
      181 eslsevqqqf nyvyemmalg nttlfldvyp lhafykqrgl kdfktclgvr qkidyssqfp
      241 ilwpigqdkl rfgrdypdil lafeaieagn iakgvvhlan heqinilqpt mysdsdlvfa
      301 lngnqfayvt nilpssvtqp veltmasqck ridnkrtitf sdynpiadls dvkqrmpfvl
      361 kaadrfdell rgskrsliee slqdiaswgg vk
//
LOCUS       WP_258087283             289 aa            linear   BCT 02-MAR-2025
DEFINITION  integrase domain-containing protein [Xenorhabdus bovienii].
ACCESSION   WP_258087283
VERSION     WP_258087283.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024244.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12835.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..289
                     /product="integrase domain-containing protein"
                     /calculated_mol_wt=32138
     Region          1..90
                     /region_name="Phage_int_SAM_2"
                     /note="Phage integrase, N-terminal; pfam12834"
                     /db_xref="CDD:432819"
     Region          102..250
                     /region_name="Integrase_1"
                     /note="pfam12835"
                     /db_xref="CDD:432820"
ORIGIN      
        1 msrlikelkf farkaggshk tchdririag rlgalllsln iqvkslsqlk akhveqyvda
       61 rlsqgiakrt vqnemsalrn ifrmagrekl etsprlsnqa lglsgtsrag tkqaipdatf
      121 qvvyqkaler daglavtlkl arllglrsqe avqcsaslks wlkqleqpep klhvvfgtkg
      181 grprqtrvld vaavkkaveq amaiaeqrgg rlidkpdlkq amnywrtytt rigltgchsp
      241 hslryawaqd alsfyqqngf srqesralvs mdlghgdgrg ryvvriysr
//
LOCUS       WP_258087298             286 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6387 family protein [Xenorhabdus bovienii].
ACCESSION   WP_258087298
VERSION     WP_258087298.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 286)
  AUTHORS   Hejnova,J., Pages,D., Rusniok,C., Glaser,P., Sebo,P. and
            Buchrieser,C.
  TITLE     Specific regions of genome plasticity and genetic diversity of the
            commensal Escherichia coli A0 34/86
  JOURNAL   Int J Med Microbiol 296 (8), 541-546 (2006)
   PUBMED   17049458
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039754.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19924.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..286
                     /product="DUF6387 family protein"
                     /calculated_mol_wt=33255
     Region          1..254
                     /region_name="DUF6387"
                     /note="Family of unknown function (DUF6387); pfam19924"
                     /db_xref="CDD:437756"
ORIGIN      
        1 mtkaeiasav newfnienys vlqnltveql fqeienrivv yrmeqyragl spenlrrhqk
       61 yyeeliegkv vfgdvfggpe krlsssyavk pvthqglwev agyvaafdky vnpegkplph
      121 mevshylkea ganneglmlv qinlaetsse eiinhlkvmv pewkqqlqap epqarnfrfg
      181 vsnlkkildy niipimdllf waqdeevrig mpqltsfiyp defkdgirdv ekmkstdhpl
      241 avkyltklar yqsfvdftyr yddrrhwnvq dlireelgkd eqsgqd
//
LOCUS       WP_258087324             262 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Xenorhabdus bovienii].
ACCESSION   WP_258087324
VERSION     WP_258087324.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..262
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=27907
     Region          7..259
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(14,16..17,19,38..40,89..91,139..141,154,158,
                     186..189)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(113,141,154,158)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mdlgiadrwa vicaaseglg fscaaalvae gvnvvinarr peplkaaarr lqninpavsi
       61 kwvpgdites qtqdtvlsas pmvdilvtna agpptgnysd wnrdiwyqai ntnmltpisl
      121 iqividemvn rrfgrvinit sgtvkapqse lglsngargg ltgficglak tdslasnnvt
      181 innllpgafd tnrlkqtfaq kasrcgdlpe riamqrrqki pagrfgtpee fgaycaflcs
      241 vyagyitgqn ilidggaypg if
//
LOCUS       WP_258087348             247 aa            linear   BCT 02-MAR-2025
DEFINITION  phage baseplate protein [Xenorhabdus bovienii].
ACCESSION   WP_258087348
VERSION     WP_258087348.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 247)
  AUTHORS   Yang,F., Jiang,Y.L., Zhang,J.T., Zhu,J., Du,K., Yu,R.C., Wei,Z.L.,
            Kong,W.W., Cui,N., Li,W.F., Chen,Y., Li,Q. and Zhou,C.Z.
  TITLE     Fine structure and assembly pattern of a minimal myophage Pam3
  JOURNAL   Proc Natl Acad Sci U S A 120 (4), e2213727120 (2023)
   PUBMED   36656854
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF044880.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21821.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..247
                     /product="phage baseplate protein"
                     /calculated_mol_wt=27330
ORIGIN      
        1 mfgmpdlpkm pdipnwkgvp naaldagisl ggaalintlf gnywgifnqy gipllladnv
       61 islqyqnqyr vvsapiengs fatynkvsdp ykvtvqltkg sggtlergaf laqleilaks
      121 tlkfhvvtpe fvytnaaivg ydlareskdg atlikvnvhl eeirevkvky dkeevknpdd
      181 akkkdtgdqt qkvesqkrrt ekgdmswgky iftnpeaafn tamdslnqea qekfkilnkw
      241 isggfpq
//
LOCUS       WP_258087357             405 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Xenorhabdus bovienii].
ACCESSION   WP_258087357
VERSION     WP_258087357.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025001.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13614.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..405
                     /product="AAA family ATPase"
                     /calculated_mol_wt=45171
     Region          15..106
                     /region_name="HTH_54"
                     /note="ParA helix turn helix domain; pfam18607"
                     /db_xref="CDD:436616"
     Region          114..394
                     /region_name="ParA"
                     /note="ParA-like ATPase involved in chromosome/plasmid
                     partitioning or cellulose biosynthesis protein BcsQ [Cell
                     cycle control, cell division, chromosome partitioning,
                     Cell motility]; COG1192"
                     /db_xref="CDD:440805"
ORIGIN      
        1 mndaykqldr vaersvrllq slteqiqtqk eelnetsyyq vyskaavakl pkltrasvdy
       61 avsemeeqgy efekrqtgss skyamtlqni idlyhhrgvp kyrdryfgef tffvgnlkgg
      121 vsktvstvsl ahalrthphl iyedlrilvi dldpqasatm flnheqsigs vettsaqaml
      181 qdvsreella efiipsvvqg vdviaasied afiasrweel caehlpgrni ytvlrdniis
      241 kiskdydfif vdsgphldsf lsnaitaadi lmtpippaqv dfhstlkyla rlpelvelie
      301 stgastslmg nigfmsklln ktdhklchsl akeifggdml dfslprldgf ercgesfdtv
      361 isanpstyig ssealknakn aaedfaksvf drveflranr gnhak
//
LOCUS       WP_258087373             261 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA cytosine methyltransferase [Xenorhabdus bovienii].
ACCESSION   WP_258087373
VERSION     WP_258087373.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012372.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00145.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..261
                     /product="DNA cytosine methyltransferase"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=29145
     Region          2..>166
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
ORIGIN      
        1 mtayyneidp yaaqwlrnli aaghiapgdv dersiedvkp ddlrnytqch ffagigvwsy
       61 alrnagwsdd kpvwtgscpc qpfsaagkga gftderhlwp hfhylieqcr prvvfgeqva
      121 skdgltwfdl vqtdlegtgy tsaavdicaa gigaphirqr lywvghannp ipqglrkhwe
      181 ivhqegwqds krhalssdva thvwnewepn qgadekirii panygkaidg itnrmgrlra
      241 ygnaivapva eefikaymqg v
//
LOCUS       WP_258087384              74 aa            linear   BCT 02-MAR-2025
DEFINITION  DDE-type integrase/transposase/recombinase, partial [Xenorhabdus
            bovienii].
ACCESSION   WP_258087384
VERSION     WP_258087384.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024997.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13610.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         <1..74
                     /product="DDE-type integrase/transposase/recombinase"
     Region          <1..74
                     /region_name="Rve"
                     /note="Transposase (or an inactivated derivative), DDE
                     domain [Mobilome: prophages, transposons]; COG3316"
                     /db_xref="CDD:442545"
ORIGIN      
        1 gieirqnkyl nnrieqdprh vkrrirpmlg fksfrraqti lagielvsml rkgqdsqsed
       61 kalspaemfy rlaa
//
LOCUS       WP_258087410             112 aa            linear   BCT 02-MAR-2025
DEFINITION  Rieske 2Fe-2S domain-containing protein [Xenorhabdus bovienii].
ACCESSION   WP_258087410
VERSION     WP_258087410.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 112)
  AUTHORS   Botelho,H.M., Leal,S.S., Veith,A., Prosinecki,V., Bauer,C.,
            Frohlich,R., Kletzin,A. and Gomes,C.M.
  TITLE     Role of a novel disulfide bridge within the all-beta fold of
            soluble Rieske proteins
  JOURNAL   J Biol Inorg Chem 15 (2), 271-281 (2010)
   PUBMED   19862563
REFERENCE   2  (residues 1 to 112)
  AUTHORS   Iwata,S., Saynovits,M., Link,T.A. and Michel,H.
  TITLE     Structure of a water soluble fragment of the 'Rieske' iron-sulfur
            protein of the bovine heart mitochondrial cytochrome bc1 complex
            determined by MAD phasing at 1.5 A resolution
  JOURNAL   Structure 4 (5), 567-579 (1996)
   PUBMED   8736555
REFERENCE   3  (residues 1 to 112)
  AUTHORS   Brandt,U., Yu,L., Yu,C.A. and Trumpower,B.L.
  TITLE     The mitochondrial targeting presequence of the Rieske iron-sulfur
            protein is processed in a single step after insertion into the
            cytochrome bc1 complex in mammals and retained as a subunit in the
            complex
  JOURNAL   J Biol Chem 268 (12), 8387-8390 (1993)
   PUBMED   8386158
REFERENCE   4  (residues 1 to 112)
  AUTHORS   Huang,J.T., Struck,F., Matzinger,D.F. and Levings,C.S. 3rd.
  TITLE     Functional analysis in yeast of cDNA coding for the mitochondrial
            Rieske iron-sulfur protein of higher plants
  JOURNAL   Proc Natl Acad Sci U S A 88 (23), 10716-10720 (1991)
   PUBMED   1961737
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012575.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00355.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..112
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /GO_function="GO:0051537 - 2 iron, 2 sulfur cluster
                     binding [Evidence IEA]"
                     /calculated_mol_wt=12487
     Region          <24..>63
                     /region_name="Rieske"
                     /note="Rieske domain; a [2Fe-2S] cluster binding domain
                     commonly found in Rieske non-heme iron oxygenase (RO)
                     systems such as naphthalene and biphenyl dioxygenases, as
                     well as in plant/cyanobacterial chloroplast b6f and
                     mitochondrial cytochrome bc(1) complexes; cl00938"
                     /db_xref="CDD:445190"
     Site            order(39,41..42,59,62)
                     /site_type="other"
                     /note="[2Fe-2S] cluster binding site [ion binding]"
                     /db_xref="CDD:239550"
ORIGIN      
        1 mgikkidysg allinfpaen krsvvyiens kiialddkcp hrggpihlcr khsdgklecl
       61 whgntikkps iskdvsaiyh rttgkvtlvs vtktnrewpv ktiaiklilk nr
//
LOCUS       WP_258087432             289 aa            linear   BCT 02-MAR-2025
DEFINITION  integrase domain-containing protein [Xenorhabdus bovienii].
ACCESSION   WP_258087432
VERSION     WP_258087432.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024244.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12835.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..289
                     /product="integrase domain-containing protein"
                     /calculated_mol_wt=32393
     Region          1..90
                     /region_name="Phage_int_SAM_2"
                     /note="Phage integrase, N-terminal; pfam12834"
                     /db_xref="CDD:432819"
     Region          102..250
                     /region_name="Integrase_1"
                     /note="pfam12835"
                     /db_xref="CDD:432820"
ORIGIN      
        1 msrlikelkf farqgggshk tchdririag rlgalllsln iqvkslshlk tkhveqyvda
       61 rlsqgiakrt vqnemsalrn ifrmagrekl etsprlsnqa lglsgtsrag tkqaipdatf
      121 qivyqkaler dagfavtlkl arllglrsqe avqcsaslks wrkqleqpep klhvvfgtkg
      181 grpretrvld vaavkeaveq aivvaeqrdg rlidkpdlkq amnywrtytt rigltgchsp
      241 hslryawaqd alrfyqqngf srqearalvs mdlghgdgrg ryveriysr
//
LOCUS       WP_258087494             265 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA cytosine methyltransferase [Xenorhabdus bovienii].
ACCESSION   WP_258087494
VERSION     WP_258087494.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012372.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00145.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..265
                     /product="DNA cytosine methyltransferase"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=29341
     Region          2..262
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
ORIGIN      
        1 mtayyneidp yaaqwlrnli aaghiapgdv dersiedvkp ndlrnytqch ffagigvwsy
       61 alrnsgwpdn kpvwtgscpc qpfsaagrgn gfaderhlwp hfhylieqcr prvvfgeqva
      121 sglgwfdlvq tdlagagyss aaidicaagv gaphirqrly wvghannpvp qglrrhweiv
      181 hqegwqdskr htlssdvaah vwnewepnqg adgkiriipa nygkavdgit nrvgrlrayg
      241 naivapvaea firayigsln eitei
//
LOCUS       WP_258087513             304 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Xenorhabdus
            bovienii].
ACCESSION   WP_258087513
VERSION     WP_258087513.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..>304
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          91..>298
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 mlillkelik nrvsvwvcen klklafaget ppvqlidkvk ekrqsvidfl nercifseed
       61 fqsfifnknq snvditfadp sqylenkiea ifpatslqqg fvyhylaqpq ddayrvqlll
      121 dyhdrldfav yqqawalasl rfpalrtafd wegevlqivt egasigpanf tikdisslpp
      181 eewdraieel qrndrtqpfd lsqpglirft lirqqaqrvt vlitqhhcia dgwstpillq
      241 tvheyynalv qgrvppkggd taylatqqyh idhkdaseay waerktqfqg andlsallsh
      301 gidl
//
LOCUS       WP_258087538             369 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Xenorhabdus
            bovienii].
ACCESSION   WP_258087538
VERSION     WP_258087538.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 369)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         <1..>369
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          1..145
                     /region_name="NRPS-para261"
                     /note="non-ribosomal peptide synthase domain TIGR01720"
                     /db_xref="CDD:273774"
     Region          157..>363
                     /region_name="C_NRPS-like"
                     /note="Condensation domain of nonribosomal peptide
                     synthetases (NRPSs); cl40425"
                     /db_xref="CDD:394795"
ORIGIN      
        1 etiihtkeml ravpnkgigy galhqagnla gelpaisfny lgqlggdagq grhqdwsltd
       61 ddcgavvasd npspllldin gavqagslqf svrsrlspal tqvfitafeq alttvitagq
      121 kqarlggvkt psdygiegvs ierlsrfqqr yqiealypat slqqgfvyhy laqpqddayr
      181 vqllldyhdr ldfaayqqaw slaslrfpvl rtafdwegev lqivtegasi gpanftikdi
      241 sslpaeewdr aieelqqndr aqpfdlhhpg lirftlirqq aqrvtvlitq hhciadgwsn
      301 pillqtvhey ynallqgrvl pkgvdtayla tqqyhldhke aseaywaerk tqfqgandls
      361 allshgidl
//
LOCUS       WP_258087568             262 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail sheath subtilisin-like domain-containing protein,
            partial [Xenorhabdus bovienii].
ACCESSION   WP_258087568
VERSION     WP_258087568.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 262)
  AUTHORS   Xue,Q. and Egan,J.B.
  TITLE     Tail sheath and tail tube genes of the temperate coliphage 186
  JOURNAL   Virology 212 (1), 218-221 (1995)
   PUBMED   7676633
REFERENCE   2  (residues 1 to 262)
  AUTHORS   Temple,L.M., Forsburg,S.L., Calendar,R. and Christie,G.E.
  TITLE     Nucleotide sequence of the genes encoding the major tail sheath and
            tail tube proteins of bacteriophage P2
  JOURNAL   Virology 181 (1), 353-358 (1991)
   PUBMED   1825255
REFERENCE   3  (residues 1 to 262)
  AUTHORS   Arisaka,F., Ishimoto,L., Kassavetis,G., Kumazaki,T. and Ishii,S.
  TITLE     Nucleotide sequence of the tail tube structural gene of
            bacteriophage T4
  JOURNAL   J Virol 62 (3), 882-886 (1988)
   PUBMED   2963141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04984.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         <1..>262
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
     Region          1..>262
                     /region_name="Phage_sheath_1"
                     /note="Phage tail sheath protein subtilisin-like domain;
                     cl01389"
                     /db_xref="CDD:470182"
ORIGIN      
        1 hhgvsvrett rlstlirdin tsvigvvcta ddadaevfpl dtpvlitrin svigkagktg
       61 tlyttlkais dqcspkvivi rvadagnlhg dgekptqdql iiggvnesgr ytglyallta
      121 danigehpri lavpqldtqp valqlaifae klrafayvsa yscktlaevk kyrenfsqre
      181 vmiiypdfit ynsqsgknet vpatafalgl raridadqgw hkslsnvpvn gvlgisadiy
      241 wtlqgtdtda ddlnskgvtt li
//
LOCUS       WP_258087574             207 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein, partial [Xenorhabdus
            bovienii].
ACCESSION   WP_258087574
VERSION     WP_258087574.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 207)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..>207
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          <3..>206
                     /region_name="PRK12467"
                     /note="peptide synthase; Provisional"
                     /db_xref="CDD:237108"
ORIGIN      
        1 mcavwqdvlg leqvgiednf friggdsivs irlvsklrqa gfslqvksif daptvarlak
       61 llaqastavr viaepgllsg efgllpiqqa ffgrnlpcph hwnqafmmql pgeiryadie
      121 qalirlagrh dmlrtrfvct edgyrqcyqa empfglpalh radvsvleka alhqqltqwq
      181 ggfdyaagsl wqaghltgya dgsarlf
//
LOCUS       WP_258087595             193 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase large subunit domain-containing protein, partial
            [Xenorhabdus bovienii].
ACCESSION   WP_258087595
VERSION     WP_258087595.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 193)
  AUTHORS   Baumann,R.G. and Black,L.W.
  TITLE     Isolation and characterization of T4 bacteriophage gp17 terminase,
            a large subunit multimer with enhanced ATPase activity
  JOURNAL   J Biol Chem 278 (7), 4618-4627 (2003)
   PUBMED   12466275
REFERENCE   2  (residues 1 to 193)
  AUTHORS   Lang,A.S., Taylor,T.A. and Beatty,J.T.
  TITLE     Evolutionary implications of phylogenetic analyses of the gene
            transfer agent (GTA) of Rhodobacter capsulatus
  JOURNAL   J Mol Evol 55 (5), 534-543 (2002)
   PUBMED   12399927
REFERENCE   3  (residues 1 to 193)
  AUTHORS   Mitchell,M.S., Matsuzaki,S., Imai,S. and Rao,V.B.
  TITLE     Sequence analysis of bacteriophage T4 DNA packaging/terminase genes
            16 and 17 reveals a common ATPase center in the large subunit of
            viral terminases
  JOURNAL   Nucleic Acids Res 30 (18), 4009-4021 (2002)
   PUBMED   12235385
REFERENCE   4  (residues 1 to 193)
  AUTHORS   Lang,A.S. and Beatty,J.T.
  TITLE     The gene transfer agent of Rhodobacter capsulatus and 'constitutive
            transduction' in prokaryotes
  JOURNAL   Arch Microbiol 175 (4), 241-249 (2001)
   PUBMED   11382219
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015211.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03237.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         <1..>193
                     /product="terminase large subunit domain-containing
                     protein"
     Region          <12..>151
                     /region_name="YjcR"
                     /note="Uncharacterized conserved protein YjcR, contains
                     N-terminal HTH domain [Function unknown]; COG5484"
                     /db_xref="CDD:444235"
ORIGIN      
        1 vyninrkfvl dlfvwqkrwk anqhhrnrfl hkcrqvgadh yfvlealsda crtgrnkifm
       61 sdkdwlqnfv ynvaqyfpeq qthltenaed irllklsnga eirflhensc svsisgdvyv
      121 sewaysddpi klirlalgis lntkwrrtfy ssrdsgdnge aaykefftrn cvkgesaffd
      181 tvtlfddven rld
//
LOCUS       WP_258087597             188 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Xenorhabdus bovienii].
ACCESSION   WP_258087597
VERSION     WP_258087597.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 188)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         <1..>188
                     /product="AMP-binding protein"
     Region          <1..188
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(21,23..24,27,43..44,60..65,155,167,170,178..181)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(43..44,60..65,155,167,170,181)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
ORIGIN      
        1 gdsdqllsfi ntheitkafi ptalmnhfat elarstlqvi htggealnal nlppdvtlfn
       61 qygptegtvc atqnwlqdgd raigkgidnt rlyvldgegn lspigapgel yiggaglarg
      121 ywnrpaltae rfvvnpfata edqargytrl yktgdwvrwr pdgnleyrgr ndfqvkirgy
      181 rielgeie
//
LOCUS       WP_258087605             166 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein, partial [Xenorhabdus bovienii].
ACCESSION   WP_258087605
VERSION     WP_258087605.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 166)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         <1..>166
                     /product="AMP-binding protein"
     Region          <1..>166
                     /region_name="EntF"
                     /note="seryl-AMP synthase component of non-ribosomal
                     peptide synthetase [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG1020"
                     /db_xref="CDD:440643"
ORIGIN      
        1 qqfeaqvvat pdnvalvfag etltyrqvne ranqlavvir eryqqqrhap mpadtpvaly
       61 ldrslemiis ilavlkagga yvpmspeypp ervrfiladt gsscvvtqqr hltalgeyth
      121 tlsliaaddp svtagrpmdn pvpvngatdl ayiiytsgtt gqpkgv
//
LOCUS       WP_258087647             102 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding enzyme, partial [Xenorhabdus bovienii].
ACCESSION   WP_258087647
VERSION     WP_258087647.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024591.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13193.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         <1..>102
                     /product="AMP-binding enzyme"
     Region          <1..101
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
ORIGIN      
        1 nleyrgrndf qvkirgyrie lgeiesalas hpqvkqavvi dreheghkvl aaylvtdgel
       61 sdeilighvs arlpdymvpa sltrietvpl tlngkldrqa lp
//
LOCUS       WP_258087263            2537 aa            linear   BCT 02-MAR-2025
DEFINITION  TcdA/TcdB pore-forming domain-containing protein [Xenorhabdus
            bovienii].
ACCESSION   WP_258087263
VERSION     WP_258087263.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 2537)
  AUTHORS   Barth,H., Pfeifer,G., Hofmann,F., Maier,E., Benz,R. and Aktories,K.
  TITLE     Low pH-induced formation of ion channels by clostridium difficile
            toxin B in target cells
  JOURNAL   J Biol Chem 276 (14), 10670-10676 (2001)
   PUBMED   11152463
REFERENCE   2  (residues 1 to 2537)
  AUTHORS   Qa'Dan,M., Spyres,L.M. and Ballard,J.D.
  TITLE     pH-induced conformational changes in Clostridium difficile toxin B
  JOURNAL   Infect Immun 68 (5), 2470-2474 (2000)
   PUBMED   10768933
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024322.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12920.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2537
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..2537
                     /product="TcdA/TcdB pore-forming domain-containing
                     protein"
                     /calculated_mol_wt=284487
     Region          931..1117
                     /region_name="C80_RtxA-like"
                     /note="peptidase C80 cysteine binding domain of RTX toxin
                     RtxA and related proteins; cd20501"
                     /db_xref="CDD:410974"
     Site            order(960,963..964,967,1007..1010,1019,1053..1055,
                     1089..1093,1099)
                     /site_type="other"
                     /note="peptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410974"
     Site            order(971..972,1003,1051,1084,1086,1097..1098)
                     /site_type="other"
                     /note="allosteric effector binding site [chemical
                     binding]"
                     /db_xref="CDD:410974"
     Region          1162..1808
                     /region_name="TcdA_TcdB_pore"
                     /note="TcdA/TcdB pore forming domain; pfam12920"
                     /db_xref="CDD:463749"
ORIGIN      
        1 mvymskdfkk llntlidrqi evagrqtewf nmnanarady irqvnerlqe mqqstlsvla
       61 aqhfqmqdnp vsvgdqlqtl qqrrqqmdgk sdtpaikayk qqldrdirly srqqaaithf
      121 nssrkkaldm lspsgsktln amtlredaav kqakldteik nleqqltiqv tdstfspkyv
      181 rlfsklqayk dvkaryiall etsskeetke akafskliev plasddlpvn vsllmmeerp
      241 gyirmnvalv naspdgrfkd fflkdgrlvv pkdgvfnfsf gtparslawq qqyrlksepp
      301 sfrsptyapi rsvlvkiefv ekyfanylvs esteregfke hfldndrkil lisvdrkvpn
      361 qigikvsght hevplagtls dlinqnadit sfqtigledf rqnsydpdrd glfinihele
      421 rsvgfgnrqy llempqgkip sktylsatpf gvmsvdgdkv ssghlskaqt aelyqynaaf
      481 fetldrlrdd gakasrlfeg sserkvfeqq lvrllernhi tpagvlesey tdnrmrdikg
      541 nnlnkvlweq afatsvweni dndpllskla nklnslvfss ttvdkvlkns yvqsdiaqvk
      601 gllalqyeqw rirateeetq rinranaeqh pnnpkiqvfn qteversldr kllalllvgp
      661 enfertdeql ypavkaalls negrslrkqv lfhvlrpvad sfsklavpvn phaelmserg
      721 dnkviinnrl nqpdpfliln tspeeqvyhd gsnlikddky rsynqfrpdp enkatlymnd
      781 ldtpfvggis gttqtvsnvl pelfgdtlsv keywnfqman aafmirngyh sffetfyvaa
      841 ryepksadsi gkgmlqmfde yraegrekal qgelydgvma rvlpiinqgl peakkfhspr
      901 fmptlldqee gryrhepegi apfdekpvsn wekpvveahh eggmsrfdgq liiqlendpv
      961 vreaaaklag khtdsvlvql daqsqyqvvh gdltilkdke kirwqlvghs rdggdklnhq
     1021 tlakrtpeal asqlsqfytd sgvkaspehi smvscslage dqqesyalkf aqsldqrirp
     1081 lsvkayttqi tvspegrkql iengnkaalv fnpensvwei tvtpgksvpa ggmvnpplgn
     1141 ktapvpdnvq idirllemln raedfqqate qlysknalsa eewlpvlgsl regesrpgsy
     1201 slqfintars elppqtfttd drriidfihs ydkdletvsk thayskgklt lrtgipeada
     1261 vhglntafiv ktlipwfadr nrttvasdkv pntletalrv htyvnlaqma hgtledgakl
     1321 aslyravase grgvtsslfs slshvstgvg aglnilsval dgielahaqn esqkavygtq
     1381 lafdsaglvt tgvgigagil gapivagfas slavplaglg igftalaeaf grvasdaqav
     1441 gnyfadleaa yqqggyrqte kvaadgsryt vmepipgavi rqldlrhghl tfdsqylyrn
     1501 dptyswgsgr snyffwwpgr aadtdkkhai niregighkq aqsnfhfrpr ssdililpvt
     1561 mksyinyeym ilpfvtarnd rgfdvlrrle edgrfdfdfy afpgervvrr ikpefvatpi
     1621 diilddedrd iviqqlpekd ygilsyqltg gkgkyrislq egvslslqgn tgthwildar
     1681 higsnvntsf skkdnrqllh igsikitlpe ksdnislinn agifsvkqnk enqwqitesv
     1741 tnamqfnslq alhdhlrqls nsehhnrpyl vveyyqhspq srpvgrafye tgrdrmiytn
     1801 vpdaadflsy aelakvegnk awfyrdttlw qvdivsgevl rqylpikfpg sdqekisshv
     1861 mqsndqlwfv verqldegyi sytyqvaeea lklvavdgnt vmlagldkis eknfvalpvp
     1921 ldssdgefng llaplaanqw ftgdlcaper qvkgspaevi slsgrvagvd rhywlqtdgk
     1981 qlrnvvrmnr inpdqedasi laelkkknsd llaltadftr vftttgdkpg yyfyshqrhs
     2041 lyfqqdngls gtpaskvavd dirsvsiank qlvalssrgm lwladdqgsi rligvtadwl
     2101 qqphqnglta alsqlardnp drfstllllg lqdsngkpis awydstagrv vqsgvglite
     2161 htltylglae dgsqawifdt dnhqlyrqpl saepdlklse krvlseepaa aepwlrashq
     2221 yrsavrqgnt lrletpdgav lllsadakmt drpvliawhv qgrpdsqias aivalrneae
     2281 lpqavrlfse rgypawylpe egktlrssiv dsnhvlhylg qvagqeasyv hdqttgelwq
     2341 vseekstleg nycfvnrtpe slvlqvgqvp lgekirlpql agtdrlaitg rskelyywls
     2401 spealthyrh itiddrgqgs airfsdtcia nlslwrsgqn lvllhqased tsicivsieq
     2461 aaqrymrles tgtpalkkmk iihllrkmdk ltvlnpdvsc felvseegef rikpvertek
     2521 lesfssipah svliprm
//
LOCUS       WP_258087663              69 aa            linear   BCT 02-MAR-2025
DEFINITION  IS1 family transposase, partial [Xenorhabdus bovienii].
ACCESSION   WP_258087663
VERSION     WP_258087663.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015750.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03811.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..>69
                     /product="IS1 family transposase"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          8..>69
                     /region_name="transpos_IS1"
                     /note="IS1 family transposase; NF033558"
                     /db_xref="CDD:468085"
ORIGIN      
        1 makvdvkcpf cqqtppvkkh glgstghqry rcqeccrsfq ldyeyrachp gtkdkildlt
       61 mnnagirdt
//
LOCUS       WP_258086901             549 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator receiver domain [Xenorhabdus bovienii].
ACCESSION   WP_258086901
VERSION     WP_258086901.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 549)
  AUTHORS   Bellieny-Rabelo,D., Pretorius,W.J.S. and Moleleki,L.N.
  TITLE     Novel Two-Component System-Like Elements Reveal Functional Domains
            Associated with Restriction-Modification Systems and paraMORC
            ATPases in Bacteria
  JOURNAL   Genome Biol Evol 13 (3) (2021)
   PUBMED   33565597
REFERENCE   2  (residues 1 to 549)
  AUTHORS   Casino,P., Rubio,V. and Marina,A.
  TITLE     The mechanism of signal transduction by two-component systems
  JOURNAL   Curr Opin Struct Biol 20 (6), 763-771 (2010)
   PUBMED   20951027
REFERENCE   3  (residues 1 to 549)
  AUTHORS   Gao,R. and Stock,A.M.
  TITLE     Biological insights from structures of two-component proteins
  JOURNAL   Annu Rev Microbiol 63, 133-154 (2009)
   PUBMED   19575571
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039256.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19192.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         1..549
                     /product="response regulator receiver domain"
                     /calculated_mol_wt=62813
     Region          15..186
                     /region_name="Response_reg_2"
                     /note="Response receiver domain; pfam19192"
                     /db_xref="CDD:437036"
ORIGIN      
        1 mtdfasvsrh tinnflqsiv fiddkayapa gypdqhefda keitkvfskd gkvcavyqlt
       61 qksdieslit vakkadvavl dwqivldqds dlfesndead aeqddirgly tksiisglls
      121 dqecqnsikl ilvytgetdl egiaddileh iesdkisgfk idkkndtctl nsnncrimvi
      181 aksnrdgeyt ddyslfkdkk itykelpnfi tqqfsdmtsg llsnfamesl seirrnfyhi
      241 inlfskelds aylahqtllt ntedanellv dllgdtftsi irykklnsfi nkenikiwmn
      301 knipevnkki peengkpeni eykrshslll kllesnnnve ekyfnafssd ingqkiaknk
      361 iknlsgklst tlftesnnye iinkkfanlc yhrnpishps yhptlslgtv vksslipety
      421 yiciqqrcds vrlsnsesrr flfisitkvk ddskfnfltp dgekllidkg tyslrtvkfr
      481 giegsvrtkc cnetgkkffe pahlseeipe kfefivelke lyaqrileey saslsrvgid
      541 epewvrrar
//
LOCUS       WP_258087668              88 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5916 domain-containing protein, partial [Xenorhabdus bovienii].
ACCESSION   WP_258087668
VERSION     WP_258087668.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039587.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19313.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         <1..>88
                     /product="DUF5916 domain-containing protein"
     Region          1..>88
                     /region_name="DUF5916"
                     /note="Domain of unknown function (DUF5916); pfam19313"
                     /db_xref="CDD:466036"
ORIGIN      
        1 sfftegtelf drgnmfysrr vgktfgdidl ndneetssap geaplinatk lsgrtskglg
       61 igvfnaitdk tfatvkdtlt getrevlv
//
LOCUS       WP_258087710              72 aa            linear   BCT 02-MAR-2025
DEFINITION  DDE-type integrase/transposase/recombinase, partial [Xenorhabdus
            bovienii].
ACCESSION   WP_258087710
VERSION     WP_258087710.1
KEYWORDS    RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024997.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13610.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Xenorhabdus bovienii"
                     /db_xref="taxon:40576"
     Protein         <1..>72
                     /product="DDE-type integrase/transposase/recombinase"
     Region          <1..72
                     /region_name="DDE_3"
                     /note="DDE superfamily endonuclease; cl46863"
                     /db_xref="CDD:481203"
ORIGIN      
        1 tdgqtidfll tarrdataar rffrkairqh grptvvtide sgantaaltl lnaegepqqg
       61 ieirqnkyln nr
//
LOCUS       WP_258087738             657 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase family 2 protein [Weissella fangxianensis].
ACCESSION   WP_258087738
VERSION     WP_258087738.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (residues 1 to 657)
  AUTHORS   Zhang,Y.L., Arakawa,E. and Leung,K.Y.
  TITLE     Novel Aeromonas hydrophila PPD134/91 genes involved in O-antigen
            and capsule biosynthesis
  JOURNAL   Infect Immun 70 (5), 2326-2335 (2002)
   PUBMED   11953367
  REMARK    Erratum:[Infect Immun 2002 Jun;70(6):3308]
REFERENCE   2  (residues 1 to 657)
  AUTHORS   Swartley,J.S., Liu,L.J., Miller,Y.K., Martin,L.E., Edupuganti,S.
            and Stephens,D.S.
  TITLE     Characterization of the gene cassette required for biosynthesis of
            the (alpha1-->6)-linked N-acetyl-D-mannosamine-1-phosphate capsule
            of serogroup A Neisseria meningitidis
  JOURNAL   J Bacteriol 180 (6), 1533-1539 (1998)
   PUBMED   9515923
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025017.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13632.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..657
                     /product="glycosyltransferase family 2 protein"
                     /calculated_mol_wt=75681
     Region          86..328
                     /region_name="CESA_CelA_like"
                     /note="CESA_CelA_like are involved in the elongation of
                     the glucan chain of cellulose; cd06421"
                     /db_xref="CDD:133043"
     Site            175..177
                     /site_type="active"
                     /note="DXD motif [active]"
                     /db_xref="CDD:133043"
     Region          516..612
                     /region_name="PilZ"
                     /note="PilZ domain; pfam07238"
                     /db_xref="CDD:399904"
ORIGIN      
        1 mqlklhqkvl yglaviltvi yliwrtfftl pshdhlgsfv vaillllsei lsnmtafiii
       61 yfrvnfdknk nqqldlpdia peivwpdidv iivtheedie llrktinaav nmtpghhqkv
      121 niviaddgnr psvkllaeey qvmyidmpeg nqaakagnin halkfiqapl lvvfdadmip
      181 fqtfllhsvp yfiqnklmqe qdnqvkslgf lqtpqsfyna difqynlfse ktatneqdff
      241 srdinilngs ngaaiftgsn avfareaida vggfpektlt edfelgvrin lagyislats
      301 epessgmtpm aiksvvkqrv rwargviqsa rnlhiltnrq lpwvnrlili nvylywwsfa
      361 rrmlfilapi lfalwhiklv dvnfwlllil wapgylllhy vlgksytnir gerwgeihet
      421 ffapylwlpv lletlgikqk kfkvtnknng qstqailygi pylalwlldv walisfnygk
      481 wgseimygai isfwllthli nltfslyiaw grqinrqser farsvkgsiq vndetnipit
      541 tidisdkgll frqsesigle igrevvvely hagktitfsg virmryddnt ryglqityit
      601 sdnqnklyhl iyngrntllp rekdswmtiy dallfnvgyh lknswrniqs yrrmkek
//
LOCUS       WP_258087762             111 aa            linear   BCT 02-MAR-2025
DEFINITION  heavy metal-binding domain-containing protein [Weissella
            fangxianensis].
ACCESSION   WP_258087762
VERSION     WP_258087762.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014019.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01906.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..111
                     /product="heavy metal-binding domain-containing protein"
                     /calculated_mol_wt=11662
     Region          6..108
                     /region_name="YbjQ_1"
                     /note="Putative heavy-metal-binding; cl00426"
                     /db_xref="CDD:444900"
ORIGIN      
        1 mservlvttt eaiagyhvve tmgevfgltt rsrnvvssfa qsmkaivgge ikgytklqda
       61 arndaidrlk taaaeldana vvmmrfdsss gaigdsvtay gtavkiekdi d
//
LOCUS       WP_258087814              95 aa            linear   BCT 02-MAR-2025
DEFINITION  GIY-YIG nuclease family protein [Weissella fangxianensis].
ACCESSION   WP_258087814
VERSION     WP_258087814.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (residues 1 to 95)
  AUTHORS   Dunin-Horkawicz,S., Feder,M. and Bujnicki,J.M.
  TITLE     Phylogenomic analysis of the GIY-YIG nuclease superfamily
  JOURNAL   BMC Genomics 7, 98 (2006)
   PUBMED   16646971
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 95)
  AUTHORS   Van Roey,P., Meehan,L., Kowalski,J.C., Belfort,M. and Derbyshire,V.
  TITLE     Catalytic domain structure and hypothesis for function of GIY-YIG
            intron endonuclease I-TevI
  JOURNAL   Nat Struct Biol 9 (11), 806-811 (2002)
   PUBMED   12379841
REFERENCE   3  (residues 1 to 95)
  AUTHORS   Kowalski,J.C., Belfort,M., Stapleton,M.A., Holpert,M.,
            Dansereau,J.T., Pietrokovski,S., Baxter,S.M. and Derbyshire,V.
  TITLE     Configuration of the catalytic GIY-YIG domain of intron
            endonuclease I-TevI: coincidence of computational and molecular
            findings
  JOURNAL   Nucleic Acids Res 27 (10), 2115-2125 (1999)
   PUBMED   10219084
REFERENCE   4  (residues 1 to 95)
  AUTHORS   Aravind,L., Walker,D.R. and Koonin,E.V.
  TITLE     Conserved domains in DNA repair proteins and evolution of repair
            systems
  JOURNAL   Nucleic Acids Res 27 (5), 1223-1242 (1999)
   PUBMED   9973609
REFERENCE   5  (residues 1 to 95)
  AUTHORS   Sharma,M., Ellis,R.L. and Hinton,D.M.
  TITLE     Identification of a family of bacteriophage T4 genes encoding
            proteins similar to those present in group I introns of fungi and
            phage
  JOURNAL   Proc Natl Acad Sci U S A 89 (14), 6658-6662 (1992)
   PUBMED   1631169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013691.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01541.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..95
                     /product="GIY-YIG nuclease family protein"
                     /calculated_mol_wt=10779
     Region          3..84
                     /region_name="GIY-YIG_SF"
                     /note="GIY-YIG nuclease domain superfamily; cl15257"
                     /db_xref="CDD:472790"
     Site            order(6..8,18..20)
                     /site_type="other"
                     /note="GIY-YIG motif/motif A"
                     /db_xref="CDD:198403"
     Site            order(8,18,20,28,32,67)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:198403"
     Site            67
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:198403"
ORIGIN      
        1 mnkpyymyvl ltadnmlycg ftddvgkrla theagkgakf trpakrhplt lvyaeaftkk
       61 hdalhaeamf kkltrkqked flqdhgvsla kktfn
//
LOCUS       WP_258087840             158 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Weissella fangxianensis].
ACCESSION   WP_258087840
VERSION     WP_258087840.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..158
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=17756
     Region          10..146
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mvmedyfkdl rhkigheeii mpgvagilfd dtrqkvlmeq rgdgevgwsl vggmqnlges
       61 aptslirefk eeagidvkit aligvdtnfh htfqsgdkaq ipmflfevek tggkliadgd
      121 etlslefvpl akqpkmynqq hqlaidqirk evpygwyf
//
LOCUS       WP_258087942             164 aa            linear   BCT 02-MAR-2025
DEFINITION  IS3 family transposase, partial [Weissella fangxianensis].
ACCESSION   WP_258087942
VERSION     WP_258087942.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024729.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13333.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         <1..164
                     /product="IS3 family transposase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <3..161
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 vltdvtemrw gsgtvseray ftayidvysg eiltwnidlh ptvdfvtkpl dellntrpkl
       61 nyrltihsdq gfqyqnyeyv srlqnnhvfq smsrkatcld namaesffhl lkvgtvhnnh
      121 yqnydelksa vnnyiyyynn kriktklagk tpvqyrnlsd qlva
//
LOCUS       WP_258088011             156 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphate-starvation-inducible PsiE family protein [Weissella
            fangxianensis].
ACCESSION   WP_258088011
VERSION     WP_258088011.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Kim,S.K., Kimura,S., Shinagawa,H., Nakata,A., Lee,K.S., Wanner,B.L.
            and Makino,K.
  TITLE     Dual transcriptional regulation of the Escherichia coli
            phosphate-starvation-inducible psiE gene of the phosphate regulon
            by PhoB and the cyclic AMP (cAMP)-cAMP receptor protein complex
  JOURNAL   J Bacteriol 182 (19), 5596-5599 (2000)
   PUBMED   10986267
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017913.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06146.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..156
                     /product="phosphate-starvation-inducible PsiE family
                     protein"
                     /calculated_mol_wt=18461
     Region          4..123
                     /region_name="PsiE"
                     /note="Phosphate starvation-inducible membrane PsiE
                     (function unknown) [General function prediction only];
                     cl01264"
                     /db_xref="CDD:470141"
ORIGIN      
        1 mgykhlekgy niflgvgmli lgiimfgffv kdlwvllqmi wqvdlqknfy siaqliletf
       61 lffefvvltq eyflqnhisl qnfmyigvta mlrnllvyhd dtmgiliqsi sialmilvlv
      121 iyrwsrryla dleqeearke aifaeehhkq qlenek
//
LOCUS       WP_258088013             256 aa            linear   BCT 02-MAR-2025
DEFINITION  adaptor protein MecA [Weissella fangxianensis].
ACCESSION   WP_258088013
VERSION     WP_258088013.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (residues 1 to 256)
  AUTHORS   Nakano,M.M., Nakano,S. and Zuber,P.
  TITLE     Spx (YjbD), a negative effector of competence in Bacillus subtilis,
            enhances ClpC-MecA-ComK interaction
  JOURNAL   Mol Microbiol 44 (5), 1341-1349 (2002)
   PUBMED   12028382
REFERENCE   2  (residues 1 to 256)
  AUTHORS   Borezee,E., Msadek,T., Durant,L. and Berche,P.
  TITLE     Identification in Listeria monocytogenes of MecA, a homologue of
            the Bacillus subtilis competence regulatory protein
  JOURNAL   J Bacteriol 182 (20), 5931-5934 (2000)
   PUBMED   11004200
REFERENCE   3  (residues 1 to 256)
  AUTHORS   Kong,L., Siranosian,K.J., Grossman,A.D. and Dubnau,D.
  TITLE     Sequence and properties of mecA, a negative regulator of genetic
            competence in Bacillus subtilis
  JOURNAL   Mol Microbiol 9 (2), 365-373 (1993)
   PUBMED   8412687
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017226.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05389.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..256
                     /product="adaptor protein MecA"
                     /calculated_mol_wt=28990
     Region          1..255
                     /region_name="MecA"
                     /note="Negative regulator of genetic competence (MecA);
                     cl02022"
                     /db_xref="CDD:470438"
ORIGIN      
        1 memerinddt irvvvtnddl aersisivdl lgnqdeieef fynileevdv dgdfedneav
       61 tfqvlpnrng lelfisknid dksmmegmln svlgkrdage andevsddll dkllasdstd
      121 nqnkpekpvi kqpevkdvtt sdkqnhlvdk lldsdnvadq elvlqfddfe niiqfslimk
      181 kqdfafstel vkyhgkfyyi lgidgqalqd nydmkdltav arefakisev saevliehgq
      241 vifandaleq vltyfn
//
LOCUS       WP_258088120             363 aa            linear   BCT 02-MAR-2025
DEFINITION  GH25 family lysozyme [Weissella fangxianensis].
ACCESSION   WP_258088120
VERSION     WP_258088120.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (residues 1 to 363)
  AUTHORS   Moroz,O.V., Blagova,E., Taylor,E., Turkenburg,J.P., Skov,L.K.,
            Gippert,G.P., Schnorr,K.M., Ming,L., Ye,L., Klausen,M., Cohn,M.T.,
            Schmidt,E.G.W., Nymand-Grarup,S., Davies,G.J. and Wilson,K.S.
  TITLE     Fungal GH25 muramidases: New family members with applications in
            animal nutrition and a crystal structure at 0.78A resolution
  JOURNAL   PLoS One 16 (3), e0248190 (2021)
   PUBMED   33711051
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 363)
  AUTHORS   Martinez-Fleites,C., Korczynska,J.E., Davies,G.J., Cope,M.J.,
            Turkenburg,J.P. and Taylor,E.J.
  TITLE     The crystal structure of a family GH25 lysozyme from Bacillus
            anthracis implies a neighboring-group catalytic mechanism with
            retention of anomeric configuration
  JOURNAL   Carbohydr Res 344 (13), 1753-1757 (2009)
   PUBMED   19595298
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013357.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01183.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..363
                     /product="GH25 family lysozyme"
                     /GO_function="GO:0003796 - lysozyme activity [Evidence
                     IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /GO_process="GO:0016998 - cell wall macromolecule
                     catabolic process [Evidence IEA]"
                     /calculated_mol_wt=39347
     Region          32..221
                     /region_name="GH25_muramidase"
                     /note="Endo-N-acetylmuramidases (muramidases) are
                     lysozymes (also referred to as peptidoglycan hydrolases)
                     that degrade bacterial cell walls by catalyzing the
                     hydrolysis of 1,4-beta-linkages between N-acetylmuramic
                     acid and N-acetyl-D-glucosamine residues; cl10448"
                     /db_xref="CDD:447900"
     Site            order(36,64,93,95,129,131,163,179,201,216)
                     /site_type="active"
                     /db_xref="CDD:119373"
     Region          266..>324
                     /region_name="ZoocinA_TRD"
                     /note="Target recognition domain of lytic exoenzyme;
                     pfam16775"
                     /db_xref="CDD:407041"
ORIGIN      
        1 mnkiktlvla agailalggv settahadtp rvdmvdtsnh ngqmtspefv ymrnnyglka
       61 vttkisegvg fhdytargni aaakqagvyi ngyhylhatt ttaaiqeady aarmakadgl
      121 pvgavlavdi eqpyqlrmgs amqsvanafe nrvraygyrs ttytggsala vspagekawi
      181 aqypyvptsa mkhystehaw qwtsnqrfas slgrfdasil ydnfftagtd kdvvvpnvtp
      241 skpvvnkdts aikkfknagn rftayksfrv dkiayangmw qainydlagg kdanwtangi
      301 plamldnvtr gnyaatrvgd qvkfmrgyny gtidqydnns ngagivegry gnvwynansl
      361 lak
//
LOCUS       WP_258088146             236 aa            linear   BCT 02-MAR-2025
DEFINITION  putative HNHc nuclease [Weissella fangxianensis].
ACCESSION   WP_258088146
VERSION     WP_258088146.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028094.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16784.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..236
                     /product="putative HNHc nuclease"
                     /calculated_mol_wt=27570
     Region          41..208
                     /region_name="HNHc_6"
                     /note="Putative HNHc nuclease; pfam16784"
                     /db_xref="CDD:293389"
ORIGIN      
        1 mdlwgkitai ngnqvvitle nreelanlsl fttaeqpqvi vdvqderhis klqrkkayai
       61 iaeiakwsgy lpeeckewmk yyftaetgnp yfsfsdtdmt tarrfitfll dfairnkvpm
      121 khsgmtyqdd ldmymymslk hrscvicgkh advhhvdgvg mgndrnlvdh rhkhlialcr
      181 ehhqeahklg wptfkekyhv kgilldpqtl nqlgimtykr meeiddkqrh tnwqtn
//
LOCUS       WP_258088285             425 aa            linear   BCT 02-MAR-2025
DEFINITION  solute carrier family 23 protein [Weissella fangxianensis].
ACCESSION   WP_258088285
VERSION     WP_258088285.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (residues 1 to 425)
  AUTHORS   Hogue,D.L. and Ling,V.
  TITLE     A human nucleobase transporter-like cDNA (SLC23A1): member of a
            transporter family conserved from bacteria to mammals
  JOURNAL   Genomics 59 (1), 18-23 (1999)
   PUBMED   10395795
REFERENCE   2  (residues 1 to 425)
  AUTHORS   Tsukaguchi,H., Tokui,T., Mackenzie,B., Berger,U.V., Chen,X.Z.,
            Wang,Y., Brubaker,R.F. and Hediger,M.A.
  TITLE     A family of mammalian Na+-dependent L-ascorbic acid transporters
  JOURNAL   Nature 399 (6731), 70-75 (1999)
   PUBMED   10331392
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013056.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00860.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..425
                     /product="solute carrier family 23 protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44849
     Region          8..416
                     /region_name="Xan_ur_permease"
                     /note="Permease family; cl23746"
                     /db_xref="CDD:474042"
ORIGIN      
        1 mevkrdvvld vdekpgfwqw iglslqhmfs mfgstvlvpl lvglnpgial fssgvgtllh
       61 ilitkrqipa ymgssfafii pmvalmkttg ypgvatgvis vgivylivaa ivgfigtdwi
      121 ekllppivvg piimviglsl sgsaaesatl ldgkydirvf lvamvtlgit iffnmylrgf
      181 lglipillgi ivgyvlaimv glvdlkpvad aawfalpefd mpfvdykpvm hwgavlvmap
      241 ialvtitehl ghlmvlddlt grdyiknpgl hrtlagdgaa slfaglvggp svtsygenig
      301 vmaitkvhsv yvligaatfa ilfsfvgkls aviqsipgav tggvsfllfg viaasglrii
      361 venqldfnsk rnlmitssvl vigignaylq ighgnnivqf sgvaiatvlg ivlnlilpek
      421 aasek
//
LOCUS       WP_258088286             209 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-binding protein [Weissella fangxianensis].
ACCESSION   WP_258088286
VERSION     WP_258088286.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13460.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..209
                     /product="NAD(P)H-binding protein"
                     /calculated_mol_wt=22513
     Region          2..199
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(7,9..10,12,31..33,72..74,106..108,124,128,148..151)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(84,108,124,128)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mrvlvagasg rvgrllvdkl aaaghevvag trhldeqfns gkvelanidl lvdeeqlvte
       61 ltdlkldavy fvagsrgsna lqvdafgavk lenaaekvgi krfimlsawq stnpkawgee
      121 lrdyyiakff adnwlmdhtt lnytilqpgn lleeagsgkv qfnpktatan sienvadvla
      181 gilnaentyg kllpmgdget diksaiaef
//
LOCUS       WP_258088293             450 aa            linear   BCT 02-MAR-2025
DEFINITION  MurT ligase domain-containing protein [Weissella fangxianensis].
ACCESSION   WP_258088293
VERSION     WP_258088293.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (residues 1 to 450)
  AUTHORS   Noldeke,E.R., Muckenfuss,L.M., Niemann,V., Muller,A., Stork,E.,
            Zocher,G., Schneider,T. and Stehle,T.
  TITLE     Structural basis of cell wall peptidoglycan amidation by the
            GatD/MurT complex of Staphylococcus aureus
  JOURNAL   Sci Rep 8 (1), 12953 (2018)
   PUBMED   30154570
  REMARK    Erratum:[Sci Rep. 2018 Dec 21;8(1):18073. doi:
            10.1038/s41598-018-37082-9.. PMID: 30573753]
            Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019952.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08353.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..450
                     /product="MurT ligase domain-containing protein"
                     /calculated_mol_wt=49756
     Region          <126..>322
                     /region_name="MurC"
                     /note="UDP-N-acetylmuramate-alanine ligase MurC and
                     related ligases, MurC/Mpl family [Cell
                     wall/membrane/envelope biogenesis]; COG0773"
                     /db_xref="CDD:440536"
     Region          323..431
                     /region_name="MurT_C"
                     /note="MurT ligase C-terminal; pfam08353"
                     /db_xref="CDD:462442"
ORIGIN      
        1 mslksglatl vgkgtyavlh dvlhrggtsl pgklatkidp nvmqsyaeky dvilitgtng
       61 ktltttlttr vlrekyadvi tnpsgsnmmq gitgtmltsk vtdkqrrpva llevdeanve
      121 avakqlkpka fvltnifrdq mdrygeiytt yekilkgirl fpeatviana dspifmrgnl
      181 pnpkvyygfn hvpatgdmka phntdgvlsp tdhsilhyhf mtfgnqgdyf svtddfkrpa
      241 ldyavtklnk ltpissnfdi dgktfqieig gmyniynala ayavgrfmgv sadqiqqafs
      301 snaqifgrqe avkvddkevt ivliknpvga nqvidmmktd dqpfsmiall nanyadgidt
      361 swiwdadfes lhdtgiqava tggerykdly vrlkmanfgd hpvyqdlkqi vpaiktlptk
      421 rvyilatyta mlqlraelkq qgyihtgmge
//
LOCUS       WP_258088302             382 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Weissella fangxianensis].
ACCESSION   WP_258088302
VERSION     WP_258088302.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (residues 1 to 382)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 382)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..382
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=41001
     Region          1..382
                     /region_name="PRK06348"
                     /note="pyridoxal phosphate-dependent aminotransferase"
                     /db_xref="CDD:180537"
ORIGIN      
        1 marslsnlfq npaanimsdi gknaalmtdv inlsigdpdm itpepilnaa kdaltvgkth
       61 ytasdgdpey ldaiinfyqk sfnltyaken vratvgagha tflafgailn pddeviifsp
      121 yfspyevqie ahhakvvvvn ctaennfqpt kediaaaitd ktkailvntp nnptgavydq
      181 etlqaladla kendiyllad evywpfvygd ndfipleslt pehtlvagsl skvfamtgfr
      241 igyligpadv iaaagllneg idfsapsvsq aagayglqhi deitpaliaq fgerleyvtt
      301 elnklpwlki lpvagsiylf adisatgmdd iefsnyllek agvlvipgqa fgeagkgyir
      361 iaatqnmatl ekavaafskl sf
//
LOCUS       WP_258088316             365 aa            linear   BCT 02-MAR-2025
DEFINITION  lipocalin-like domain-containing protein [Weissella fangxianensis].
ACCESSION   WP_258088316
VERSION     WP_258088316.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (residues 1 to 365)
  AUTHORS   Chiu,H.J., Bakolitsa,C., Skerra,A., Lomize,A., Carlton,D.,
            Miller,M.D., Krishna,S.S., Abdubek,P., Astakhova,T., Axelrod,H.L.,
            Clayton,T., Deller,M.C., Duan,L., Feuerhelm,J., Grant,J.C.,
            Grzechnik,S.K., Han,G.W., Jaroszewski,L., Jin,K.K., Klock,H.E.,
            Knuth,M.W., Kozbial,P., Kumar,A., Marciano,D., McMullan,D.,
            Morse,A.T., Nigoghossian,E., Okach,L., Paulsen,J., Reyes,R.,
            Rife,C.L., van den Bedem,H., Weekes,D., Xu,Q., Hodgson,K.O.,
            Wooley,J., Elsliger,M.A., Deacon,A.M., Godzik,A., Lesley,S.A. and
            Wilson,I.A.
  TITLE     Structure of the first representative of Pfam family PF09410
            (DUF2006) reveals a structural signature of the calycin superfamily
            that suggests a role in lipid metabolism
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 66 (Pt 10),
            1153-1159 (2010)
   PUBMED   20944205
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018805.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07143.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..365
                     /product="lipocalin-like domain-containing protein"
                     /calculated_mol_wt=41528
     Region          12..>250
                     /region_name="CrtC-like"
                     /note="carotenoid 1,2-hydratase and similar proteins;
                     cl28849"
                     /db_xref="CDD:452873"
ORIGIN      
        1 makarlmdqp adfeklgidp nkvqtwedgr rdtdtpgtse vwyfdaildd gskavlyfhp
       61 kspyklqeag dhpdigilit spegetygqq iidypaeety fgkdkcdvkv gphsvvgdfk
      121 dyeihidpva dvaadlhfha lvkpfrqgnt giitlgdnde yhytdlsvvk nqvtgtltyn
      181 gethevtgsg yhdhqwvnis pivawhhwlw ghlytenytv viydfvaskq fgykqipffg
      241 vmdnktgevi fqtdgnftke teltlqpeik khfpktskyt fanadgetvt fttkwqqele
      301 vrnmywgatd evraqydkmg iqpgymryfa kgtlsfekdg qqvtesgdmi yeynyggked
      361 peahv
//
LOCUS       WP_258088338             283 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein [Weissella
            fangxianensis].
ACCESSION   WP_258088338
VERSION     WP_258088338.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (residues 1 to 283)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..283
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=31096
     Region          38..268
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mvkkkvslvm gvatiaaagl ltvgysqkvs snsadkstlk vatsgtlypt syhdskskkl
       61 tgydievvra vakkmgrkve fkqlnvdgql tavktgkvdm aandigispq rkksyrlstp
      121 ykhsfnsivv rksdssgins wddikgkkaa geagtsyqrl akqldaktvn ynnvsndvyl
      181 rdvkngrtdf imndyylqkl alkavpdndl kikknmyfkt kddgsgtgil mkkdnkklak
      241 qvnkalaslk kdgtlkdlse kfydadvtkk pnvhisknft ikd
//
LOCUS       WP_258088475             298 aa            linear   BCT 02-MAR-2025
DEFINITION  UbiA family prenyltransferase [Weissella fangxianensis].
ACCESSION   WP_258088475
VERSION     WP_258088475.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013226.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01040.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..298
                     /product="UbiA family prenyltransferase"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /calculated_mol_wt=32407
     Region          1..296
                     /region_name="PT_UbiA"
                     /note="UbiA family of prenyltransferases (PTases);
                     cl00337"
                     /db_xref="CDD:469727"
ORIGIN      
        1 msiktwlkfv eiqslvasal plvlgnlyaa ityqefhtgy aivfaivvla lqmvanvwnn
       61 iqdfksatse ewkngvnnii gkggisqrqg witllvlali aavgglwlat qtgwpllimg
      121 ligfwvvywy agtplplsrt pfgelasglt mgyliflsat yvniaptfng elvfkaiias
      181 aiawfaigdi mfannigdyd edvaegrhtl awylgknrav kafgwvyiag yvmliiavia
      241 gilpwlslva lvsfpivmkn vkafqanpik pnfpyaikna vvisvtlaig lilalifn
//
LOCUS       WP_258088477             270 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein [Weissella
            fangxianensis].
ACCESSION   WP_258088477
VERSION     WP_258088477.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (residues 1 to 270)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..270
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=28993
     Region          45..266
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mnkytkiaai aavtlitass sayavvpsas dksvpayqkn lhkkgtltvg legtyspysy
       61 rdksgkltgf evdlskavak klglkvkftq tkfdslvagl dsrkydvvyn nmgktkertk
      121 kyafakpyiy tktvmitkag sdiktaadlk gkksaqsass nfgqaakkag tnvvsvpgfa
      181 eaidlvnsgk advtlnsqds wgvykkahpe tklkakvtkt ldntssspml nkkdkalakk
      241 itkaqkqlak dgtlsdlsek yfdsdltkkp
//
LOCUS       WP_258088121             106 aa            linear   BCT 02-MAR-2025
DEFINITION  phage holin, LLH family [Weissella fangxianensis].
ACCESSION   WP_258088121
VERSION     WP_258088121.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (residues 1 to 106)
  AUTHORS   Gindreau,E. and Lonvaud-Funel,A.
  TITLE     Molecular analysis of the region encoding the lytic system from
            Oenococcus oeni temperate bacteriophage phi 10MC
  JOURNAL   FEMS Microbiol Lett 171 (2), 231-238 (1999)
   PUBMED   10077848
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021218.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09682.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..106
                     /product="phage holin, LLH family"
                     /calculated_mol_wt=11765
ORIGIN      
        1 mnlqqignii lflwntgllt alaysgsrfl vahtknknll llnewamqav qyaethlhss
       61 tdkkksamsf laerlsankl gvkfddkqld tvielavtkl kgmtde
//
LOCUS       WP_258088506              81 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Weissella fangxianensis].
ACCESSION   WP_258088506
VERSION     WP_258088506.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (residues 1 to 81)
  AUTHORS   Vertes,A.A., Inui,M., Kobayashi,M., Kurusu,Y. and Yukawa,H.
  TITLE     Isolation and characterization of IS31831, a transposable element
            from Corynebacterium glutamicum
  JOURNAL   Mol Microbiol 11 (4), 739-746 (1994)
   PUBMED   8196545
REFERENCE   2  (residues 1 to 81)
  AUTHORS   van der Zee,A., Agterberg,C., van Agterveld,M., Peeters,M. and
            Mooi,F.R.
  TITLE     Characterization of IS1001, an insertion sequence element of
            Bordetella parapertussis
  JOURNAL   J Bacteriol 175 (1), 141-147 (1993)
   PUBMED   8093238
REFERENCE   3  (residues 1 to 81)
  AUTHORS   Johansen,E. and Kibenich,A.
  TITLE     Isolation and characterization of IS1165, an insertion sequence of
            Leuconostoc mesenteroides subsp. cremoris and other lactic acid
            bacteria
  JOURNAL   Plasmid 27 (3), 200-206 (1992)
   PUBMED   1325060
REFERENCE   4  (residues 1 to 81)
  AUTHORS   Cirillo,J.D., Barletta,R.G., Bloom,B.R. and Jacobs,W.R. Jr.
  TITLE     A novel transposon trap for mycobacteria: isolation and
            characterization of IS1096
  JOURNAL   J Bacteriol 173 (24), 7772-7780 (1991)
   PUBMED   1660454
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013753.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01610.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..81
                     /product="transposase"
                     /calculated_mol_wt=9399
     Region          <1..59
                     /region_name="COG3464"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442687"
ORIGIN      
        1 mkkarltlkk hlseiensft ykfsngpver annkikaikr taygfrnfkl frlriliafk
       61 dsfysqnytq kaakfmknsa a
//
LOCUS       WP_258088734             314 aa            linear   BCT 02-MAR-2025
DEFINITION  metal ABC transporter solute-binding protein, Zn/Mn family
            [Weissella fangxianensis].
ACCESSION   WP_258088734
VERSION     WP_258088734.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (residues 1 to 314)
  AUTHORS   Ilari,A., Alaleona,F., Tria,G., Petrarca,P., Battistoni,A.,
            Zamparelli,C., Verzili,D., Falconi,M. and Chiancone,E.
  TITLE     The Salmonella enterica ZinT structure, zinc affinity and
            interaction with the high-affinity uptake protein ZnuA provide
            insight into the management of periplasmic zinc
  JOURNAL   Biochim Biophys Acta 1840 (1), 535-544 (2014)
   PUBMED   24128931
REFERENCE   2  (residues 1 to 314)
  AUTHORS   Gabbianelli,R., Scotti,R., Ammendola,S., Petrarca,P., Nicolini,L.
            and Battistoni,A.
  TITLE     Role of ZnuABC and ZinT in Escherichia coli O157:H7 zinc
            acquisition and interaction with epithelial cells
  JOURNAL   BMC Microbiol 11, 36 (2011)
   PUBMED   21338480
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 314)
  AUTHORS   Lee,Y.H., Deka,R.K., Norgard,M.V., Radolf,J.D. and Hasemann,C.A.
  TITLE     Treponema pallidum TroA is a periplasmic zinc-binding protein with
            a helical backbone
  JOURNAL   Nat Struct Biol 6 (7), 628-633 (1999)
   PUBMED   10404217
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013465.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01297.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..314
                     /product="metal ABC transporter solute-binding protein,
                     Zn/Mn family"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=35027
     Region          30..311
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(105..106,109,160)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238347"
ORIGIN      
        1 mlkklsivii allvvgggif wfvngrgeqk atgsqklrvv ttnsiledmv eqvggkdvrv
       61 ysivkrgtdp heydpttndi aaateadvlf hnglnletgg sgwfnkltkt ankrdgkevf
      121 aaskhvkamy ltesgkenet dphawldlsn gvkyvkliss vlqdkdpkha kayqkrtday
      181 vekleklhke aqskfadipe kqrllvtseg afkyfskayd ikpafiwein teaqgtpeqm
      241 kqvlakidqs evkslfvess vspksmkqvs ketklpiyak iytdslakkg tkgdtyydmv
      301 kwnidkihdg mlak
//
LOCUS       WP_258088703             285 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-binding protein [Weissella fangxianensis].
ACCESSION   WP_258088703
VERSION     WP_258088703.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13460.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..285
                     /product="NAD(P)H-binding protein"
                     /calculated_mol_wt=30508
     Region          3..271
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(7,9..10,12,33..35,73..75,103..105,115,119,138..141)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(81,105,115,119)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mtilvtgatg nygsaaleel ktlvpqdeif alarneekaa tlrekgfqvr iasyddpksl
       61 ekafagidrl lfvsgsevgs rkpqhqhvvd aaqktgvsyi aytsfnkadt stsplaeeha
      121 yteqaiidsg iahtflrnnw ylenelpaiq aalkagklvh aggdgkagwt lrsefaklga
      181 havsgkfdfp svlevgnplm tykqlaaave svtgtklevi dadvatssqf lqdnagmpqe
      241 vtdmlagtqa ivksgslave sddiekylgr pflsveeslk qlltk
//
LOCUS       WP_258088850             370 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-hydroxy-acid oxidizing protein [Weissella fangxianensis].
ACCESSION   WP_258088850
VERSION     WP_258088850.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (residues 1 to 370)
  AUTHORS   Xia,Z.X. and Mathews,F.S.
  TITLE     Molecular structure of flavocytochrome b2 at 2.4 A resolution
  JOURNAL   J Mol Biol 212 (4), 837-863 (1990)
   PUBMED   2329585
REFERENCE   2  (residues 1 to 370)
  AUTHORS   Lindqvist,Y.
  TITLE     Refined structure of spinach glycolate oxidase at 2 A resolution
  JOURNAL   J Mol Biol 209 (1), 151-166 (1989)
   PUBMED   2681790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013253.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01070.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..370
                     /product="alpha-hydroxy-acid oxidizing protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=39146
     Region          14..368
                     /region_name="TIM-like beta/alpha barrel domains"
                     /note="A large family of domains similar to triose
                     phosphate isomerase (TIM) which, in general, share an
                     eight beta/alpha closed barrel structure; cl21457"
                     /db_xref="CDD:473867"
     Site            order(300..301,322..323)
                     /site_type="other"
                     /note="phosphate binding site [ion binding]"
                     /db_xref="CDD:240073"
ORIGIN      
        1 mvvvngyels ereqhlnvvn lpsleklake ilpkdsfdfi rggsedewtl rentiafnht
       61 qilphvlsni gnpetktsif glpldtpivm apaaaqgvah argevataeg maatgslmtq
      121 stysskliae aaeaghgapq ffqlylsqdd glnkflldka aaagikaivi ttdlttagyr
      181 esdvvndfhf pvpmanledf hvgsgqsdvg vghgkdvfdn eahqigiadi krvidytdlp
      241 viikgiqtpe dallaisaga qgiwvsnhgg rqlnggpasi dvlqgiatav nhqvpiifds
      301 gvrrgshvfk alasgadlva larpiiygla lggargvtdv vnhlnhefki tmqlagtkti
      361 advqqtslvk
//
LOCUS       WP_258088882             290 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Weissella fangxianensis].
ACCESSION   WP_258088882
VERSION     WP_258088882.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (residues 1 to 290)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 290)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..290
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=32785
     Region          32..279
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(39,78,111,260,263)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(39,260,263)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(39,78,111)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
ORIGIN      
        1 mkrkmylfla slfaffivgm stvnadnkek inlvavgdsl tegigdttkq qgytkrtakk
       61 ltkkydvnvn tsnygkagdr sdqilarika nsqaknnikq advivltvgg ndlqqtlfka
      121 vfsksqsavt khveqampdy tehlteltdf lkkqntdapi ylfgnynply vylanrddln
      181 ddvkiyndin anlasvddri yyvstfktlt fgqyktkasr eklrktsqna nrgslnnkvv
      241 tktltaeknv elnhyittqd hyhpnnlgyd kmstllvkkm sanrqdwlkk
//
LOCUS       WP_258088362             304 aa            linear   BCT 02-MAR-2025
DEFINITION  lytic exoenzyme target recognition domain-containing protein
            [Weissella fangxianensis].
ACCESSION   WP_258088362
VERSION     WP_258088362.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   Chen,Y., Simmonds,R.S., Young,J.K. and Timkovich,R.
  TITLE     Solution structure of the recombinant target recognition domain of
            zoocin A
  JOURNAL   Proteins 81 (4), 722-727 (2013)
   PUBMED   23184858
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028085.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16775.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..304
                     /product="lytic exoenzyme target recognition
                     domain-containing protein"
                     /calculated_mol_wt=33144
     Region          1..190
                     /region_name="CwlA"
                     /note="N-acetylmuramoyl-L-alanine amidase CwlA [Cell
                     wall/membrane/envelope biogenesis]; cl46750"
                     /db_xref="CDD:481090"
     Region          204..298
                     /region_name="ZoocinA_TRD"
                     /note="Target recognition domain of lytic exoenzyme;
                     pfam16775"
                     /db_xref="CDD:407041"
ORIGIN      
        1 mvnviknivv pgrpavdngl avapfkqvhl hstgsvapnk nfisylsrsw gnayythivg
       61 egqaiqvanv ngggydlggd wnwegyasie fnenvhsqae fnrdykiyie larqlareag
      121 itdftldngs ivgikthnyc srtghgsdhv dplpflqkwg vpydqlkhdi kygvggsvtt
      181 ssksakstak vdqvlnvgey fkakpayrvd dmkkvngiwq vysnelgggs nknwtlnglg
      241 vesvdkvdkn gkktanqtla vgdyfrlhsd rikvvandpa tngvafgtry gnvwvsadtl
      301 tevk
//
LOCUS       WP_258089034             277 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1129 family protein [Weissella fangxianensis].
ACCESSION   WP_258089034
VERSION     WP_258089034.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06570.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..277
                     /product="DUF1129 family protein"
                     /calculated_mol_wt=31130
     Region          4..>179
                     /region_name="DUF1129"
                     /note="Protein of unknown function (DUF1129); cl11555"
                     /db_xref="CDD:472220"
ORIGIN      
        1 msiedklikq nnqlraqlte knekyysdll lymrlnsfmk dqaaiesnll eivqdiieaq
       61 segltaeqyf gknpqilade llrqvpkkvg evfkfvlyfv gayvffsllp smisvnqsid
      121 ignliltgly igvvvlaglk ylgrtiyrgr vtetknwalf lklwlvimiv ivpmifiqmy
      181 attplqvtvg nklgigiilf wvviamiiff kqsekrtvlp lagfslflgi lgimtrlpge
      241 vseflrstqv ghttigvilg valvifwias vlvlkkk
//
LOCUS       WP_258089057             444 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: FAD-dependent oxidoreductase [Lactobacillaceae].
ACCESSION   WP_258089057
VERSION     WP_258089057.1
KEYWORDS    RefSeq.
SOURCE      Lactobacillaceae
  ORGANISM  Lactobacillaceae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales.
REFERENCE   1  (residues 1 to 444)
  AUTHORS   Mande,S.S., Sarfaty,S., Allen,M.D., Perham,R.N. and Hol,W.G.
  TITLE     Protein-protein interactions in the pyruvate dehydrogenase
            multienzyme complex: dihydrolipoamide dehydrogenase complexed with
            the binding domain of dihydrolipoamide acetyltransferase
  JOURNAL   Structure 4 (3), 277-286 (1996)
   PUBMED   8805537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07992.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Lactobacillaceae"
                     /db_xref="taxon:33958"
     Protein         1..444
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=48427
     Region          1..444
                     /region_name="chlor_oxi_RclA"
                     /note="reactive chlorine resistance oxidoreductase RclA;
                     NF040477"
                     /db_xref="CDD:439704"
ORIGIN      
        1 mkhfsniiig fgkagktlag tlakhgeevl iiekdpnmyg gtcinvaclp tknmiinahr
       61 gieyevalkk knaltamlrn knyhkvadlq eatvltatae flddhtvrvs dnsgqetlia
      121 drifintgat tiwpnidgll askhvysstd llvkdkqlke lvilgsgpig lefasmyaqf
      181 gshvtiidks skilghfepe iaeqakndle edgvsflles nltgvndtln gvtltistpk
      241 gikniqadgl lvatgrkanv tdlhlertsi ktgshgeilv ndiletdakd vyalgdvtgg
      301 pqftyisldd wrimanhlyg dktrsrlnrp vfantiflnp aissvgktea qlneagidyk
      361 vlkmpaasvp ktqvignprg nykalidpqt hqilgttiya eesfetinii slamqnhlsa
      421 etlrdqiyth ptmtealndl fdqi
//
LOCUS       WP_258089082             232 aa            linear   BCT 02-MAR-2025
DEFINITION  MATE family efflux transporter [Weissella fangxianensis].
ACCESSION   WP_258089082
VERSION     WP_258089082.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01554.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..232
                     /product="MATE family efflux transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=24873
     Region          11..>232
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 mqdltsgkpa kvilmfaipl mltnmvqqly nisdtlivgq tlgvnslaav gatgsiqflv
       61 mgfvqgfssg maiitaqryg ahnvrgires faasivaali tsivltitsl vfidnlldam
      121 qmpaaiygea klfigiilag timtmgynvv snalravgns kaplyyliig mivnvslell
      181 liikfhwgve gaatatvfaq fvtvvisylh itrytdtlrl swsdfklkkg dl
//
LOCUS       WP_258089100             742 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein [Weissella fangxianensis].
ACCESSION   WP_258089100
VERSION     WP_258089100.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024554.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13155.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..742
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..742
                     /product="toprim domain-containing protein"
                     /calculated_mol_wt=84436
     Region          124..216
                     /region_name="DUF3991"
                     /note="Protein of unknown function (DUF3991); pfam13154"
                     /db_xref="CDD:432999"
     Region          221..318
                     /region_name="Toprim_2"
                     /note="Toprim-like; pfam13155"
                     /db_xref="CDD:463793"
     Region          <411..508
                     /region_name="ArdcN"
                     /note="N-terminal domain of anti-restriction factor ArdC;
                     pfam08401"
                     /db_xref="CDD:429975"
     Region          <437..706
                     /region_name="ArdC"
                     /note="Antirestriction protein ArdC [Replication,
                     recombination and repair]; COG4227"
                     /db_xref="CDD:443371"
ORIGIN      
        1 mainraamka lpiqgyldyk gidyktehnr lrlvdhdscv intdknvffw nskqisgdlg
       61 dfiaayedvt pkeawvrwse fgrhyngqde tekakyqasa rennykfnwq rwriaqttnn
      121 sedylvnerg fdatfvqrla kadfikqgkp rqdrqtkewq kpailfpwhd endqvvgldq
      181 qgteinfeky gkrgtqkkva agsdtrygyn frtgngadql ivfespidal syaqmhftep
      241 tnknttflsl sgtdhqkvls qldrmkqlng hlpkqlvlat dndlagfkaa apfdmlqfeg
      301 mtnirqiptq gkdwndqlka hdpaiktltm denqqqlaal etftqqakpa vakattdekq
      361 vaqpqrvarq qrredrkgks rerneeiikd tltrvqnyqn dpkevqqyld fvaqgqnysp
      421 rntlliygqr qdativmgyk qfaergiqvn kgekgmkiyg apknlqsivt pagdrvywrd
      481 ataeqrqqak ageletrtvk hyqietvfdv kqtnaklddl pkllpnrpvn latdqspehl
      541 etvyqtlkky aqdeqharvv dqdqgaikfl adhkpmtshg vakgatainr qkpdeptiil
      601 rpdlpvtdri atlahemght alhqqsddki pngvqelqae mtsyvvlknv gvepgdisek
      661 ymsdwtnhlk efsdlkeksp nlitdvtras tsitnyladr lsdgqqitht rraapniqpt
      721 avqlatnqgi qdqtnetrgp kr
//
LOCUS       WP_258089118             310 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-dependent oxidoreductase [Weissella fangxianensis].
ACCESSION   WP_258089118
VERSION     WP_258089118.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (residues 1 to 310)
  AUTHORS   Dengler,U., Niefind,K., Kiess,M. and Schomburg,D.
  TITLE     Crystal structure of a ternary complex of D-2-hydroxyisocaproate
            dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate
            at 1.9 A resolution
  JOURNAL   J Mol Biol 267 (3), 640-660 (1997)
   PUBMED   9126843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02826.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..310
                     /product="NAD(P)-dependent oxidoreductase"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
                     /calculated_mol_wt=34825
     Region          3..310
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(140..142,144,162..164,194..195,222)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:240631"
ORIGIN      
        1 mttkllalsp ltdenietlk kyhitvvtpe tlvaddyaqi diiygwrskv iskilktpnh
       61 klkwiqsfsa gvdfmplael erqhitltna sgqkavpiae svmsyilhfa rglhvyqtqn
      121 hwepferqft lkelpviifg tgrigqqiat ylqafgttvy gvnttghsvd gfketfaind
      181 lkqmpdhiai vinalpsttt tnnffnktql glfkelflfi nigrgstvne qdllaklndg
      241 siqhaaldvt kvepipndsq lwhqdnlllt qhstwagesd slfnifmknl pdflagqpls
      301 ynvvdykrgy
//
LOCUS       WP_258089176             152 aa            linear   BCT 02-MAR-2025
DEFINITION  class Ib ribonucleoside-diphosphate reductase assembly flavoprotein
            NrdI [Weissella fangxianensis].
ACCESSION   WP_258089176
VERSION     WP_258089176.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019584.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07972.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..152
                     /product="class Ib ribonucleoside-diphosphate reductase
                     assembly flavoprotein NrdI"
                     /GO_function="GO:0010181 - FMN binding [Evidence IEA]"
                     /GO_process="GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /calculated_mol_wt=16989
     Region          2..148
                     /region_name="FMN_red"
                     /note="NADPH-dependent FMN reductase; cl00438"
                     /db_xref="CDD:469770"
ORIGIN      
        1 mpihllyssi sgntrafvkk lteyaktqgh ftlvpieisd atsdiietsh ffalvptyld
       61 ggngidngvf eiltdplreq leipenqqyl lgiigsgnkn fnaqyiltar ryavqfkvpl
      121 ianyelrgts nnvqrvyeai qqrltevqss hn
//
LOCUS       WP_258089232             230 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Weissella fangxianensis].
ACCESSION   WP_258089232
VERSION     WP_258089232.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (residues 1 to 230)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..230
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=26860
     Region          4..230
                     /region_name="PRK11517"
                     /note="DNA-binding response regulator HprR"
                     /db_xref="CDD:183172"
     Region          5..117
                     /region_name="REC_OmpR_NsrR-like"
                     /note="phosphoacceptor receiver (REC) domain of
                     Streptococcus agalactiae NsrR-like OmpR family response
                     regulators; cd18159"
                     /db_xref="CDD:381143"
     Site            order(35..36,54..64,83,90)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381143"
ORIGIN      
        1 mkykimived dvsirnllve himkygydcv vvddfenild vfisekphvv lldvnlpqyd
       61 gyywcrkirq isnqpiifls arnaeseqvm giesgaddyi tkpfyfdvvl akirsqirrm
      121 ygeyvqdsen dvltrgntsi kfktvhists mkeetltvte lklcrvlfet fpnvttrqql
      181 fsaiwneesf ieentlnvni krlrqklnli dstlkiktvr gmgyqlmeek
//
LOCUS       WP_258089336             447 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Weissella fangxianensis].
ACCESSION   WP_258089336
VERSION     WP_258089336.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (residues 1 to 447)
  AUTHORS   Mande,S.S., Sarfaty,S., Allen,M.D., Perham,R.N. and Hol,W.G.
  TITLE     Protein-protein interactions in the pyruvate dehydrogenase
            multienzyme complex: dihydrolipoamide dehydrogenase complexed with
            the binding domain of dihydrolipoamide acetyltransferase
  JOURNAL   Structure 4 (3), 277-286 (1996)
   PUBMED   8805537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07992.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..447
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=48735
     Region          1..427
                     /region_name="Pyr_redox_2"
                     /note="Pyridine nucleotide-disulphide oxidoreductase;
                     cl39093"
                     /db_xref="CDD:476868"
ORIGIN      
        1 mkvaiigsth agtfsaiqvk qqhpdaevtv feqhttvsfl scgialwlgd hvsdeqrmfy
       61 etpatmtdkg iimkmqhevv avnlaeksvq aknlltgelf setfdkivit tgskslipni
      121 sginsdriym vkswedaqkm kvvagevkra vvigagyiga eiaeqfsvtd kkvtlidgfd
      181 rvlpknfspa isdrlaqsfq khgvklalnq kvtsfedlpd ggirvntdkg syeadiavlg
      241 igflpntqlf agqvdmlnng aiitneymet svpdvyaagd attvyynpth eydylplatn
      301 airqgmlvgk nidghhlpys gtqgtsavel ygfamsatgl nkasaeqrgl aveetiyeen
      361 yrpefmlstt pvlsiltwek ktrrivgaaf mskhdisqaa nvvslaiqnn mtiddlvmad
      421 fffqpnftqp infvgatalq avndsdd
//
LOCUS       WP_258089454             150 aa            linear   BCT 02-MAR-2025
DEFINITION  winged helix-turn-helix domain-containing protein [Serratia
            liquefaciens].
ACCESSION   WP_258089454
VERSION     WP_258089454.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 150)
  AUTHORS   Wietzorrek,A. and Bibb,M.
  TITLE     A novel family of proteins that regulates antibiotic production in
            streptomycetes appears to contain an OmpR-like DNA-binding fold
  JOURNAL   Mol Microbiol 25 (6), 1181-1184 (1997)
   PUBMED   9350875
REFERENCE   2  (residues 1 to 150)
  AUTHORS   Martinez-Hackert,E. and Stock,A.M.
  TITLE     The DNA-binding domain of OmpR: crystal structures of a winged
            helix transcription factor
  JOURNAL   Structure 5 (1), 109-124 (1997)
   PUBMED   9016718
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012698.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00486.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..150
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=17159
     Region          4..>96
                     /region_name="PRK12370"
                     /note="HilA/EilA family virulence transcriptional
                     regulator"
                     /db_xref="CDD:237080"
ORIGIN      
        1 mmayefgdyl ltedgelsyk desieippke lsllyvllna ngsllskdei iekvwhgasi
       61 sdesltrciy glrrvlgnnk hyirtfysrg yrfsppyikk rnlsevkkms fdgsilsysy
      121 sivsekldfs ykqpstimlt tkkvinqvgn
//
LOCUS       WP_258089462             643 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase domain-containing protein [Serratia
            liquefaciens].
ACCESSION   WP_258089462
VERSION     WP_258089462.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 643)
  AUTHORS   Xiong,Y. and Eickbush,T.H.
  TITLE     Origin and evolution of retroelements based upon their reverse
            transcriptase sequences
  JOURNAL   EMBO J 9 (10), 3353-3362 (1990)
   PUBMED   1698615
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00078.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..643
                     /product="reverse transcriptase domain-containing protein"
                     /calculated_mol_wt=72564
     Region          <114..311
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            order(128..133,181..182,212,214..215,261..262)
                     /site_type="active"
                     /db_xref="CDD:238185"
     Site            order(128..133,181,214)
                     /site_type="other"
                     /note="NTP binding site [chemical binding]"
                     /db_xref="CDD:238185"
     Site            182
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:238185"
ORIGIN      
        1 mqltmsaelr rldeayqwlc dsrkkappna dvwdlrfrwe vrresllaql eagaysltpm
       61 qvvgkqrqvm wsaedalvlk wvalnimpfl plhskcehvr ghgggrtsll rmqqailreg
      121 yswvcrtdiq gyyaninknv lleqlalhvk ppvlmnllsq yihycvedgg efytpergia
      181 rgcalsplmg alhlwaldhh fsqqdniyya rymddvvimt ktrwslrrhv kalnghfekl
      241 gfhqhpdktf igllakgfdw mgaqlgcagl lgiapraltn hwtkvwrlye qtrslpater
      301 arrvsdylrr wqiwgrgglg agcliifspw ssaaiqmepd rivyplsdpa qvtsdwvdtr
      361 napqiaihlp esdaltiegt vvyrfimsdw ynypdrcevt itlkpgavps lsdrryigsr
      421 dyckkidsgv wggsggvyrf tmetgenrdk hhfklvrtsg spmvkvpspw gkhqlaygfv
      481 vrgngrdtki ywtdeeylpa ppncssllss ssvdfgtvss snpsdvqttr vyyscnfydp
      541 itvhvtvkam epysvygksm mstslpgwfi hgsstsngws scdpevgidl rpghpglshs
      601 pvddrenivp lhwnlcylst rrggsgrsgg elsssalvdv twd
//
LOCUS       WP_258089549             455 aa            linear   BCT 02-MAR-2025
DEFINITION  amino acid permease [Serratia liquefaciens].
ACCESSION   WP_258089549
VERSION     WP_258089549.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..455
                     /product="amino acid permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=49793
     Region          1..454
                     /region_name="AA_permease_2"
                     /note="Amino acid permease; cl45918"
                     /db_xref="CDD:459263"
ORIGIN      
        1 mggqqqdtpl krglknrhiq lialggaigt glflgiaqti kmagpsvllg yaiggfiafl
       61 imrqlgemvv eepvagsfsh faykywgdfa gflsgwnywa mfilvgmael tavgiyiqyw
      121 wpdiptwvsa avffvlinli nlvnvrlyge tefwfaiikv vaivgmilfg awllasgngg
      181 pqaslnnlwe qggfmphgis glvmamavim fsfgglemvg itaaeaadpr rsipkatnqv
      241 vyrilifyig sltvllslyp wdkvveggsp fvmifhalds slvatllnvv vltaalsvyn
      301 sgvyansrml fglatqgnap kaltrlnkrg vpvlsialsa lvtsvgvlin yvmpgkafel
      361 lmalvvstlv inwvmiclah lrfraaknrq gvipsfkalw ypfgnylclv flslilvimy
      421 fsegirisvl lmpvwilllw vgfrltrrkg anvrr
//
LOCUS       WP_258089585             545 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Serratia liquefaciens].
ACCESSION   WP_258089585
VERSION     WP_258089585.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..545
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=60711
     Region          1..545
                     /region_name="PRK15104"
                     /note="oligopeptide ABC transporter substrate-binding
                     protein OppA; Provisional"
                     /db_xref="CDD:185059"
ORIGIN      
        1 mqqtrkrtpl vmfiagllsi savysaqaad vpagvqlaqq qnivinngte vasldphkve
       61 gipesniiln lleglvstda nghvvpaaaa qwenqdfktw tfhlrpeavw sdgspvtaqd
      121 fvyswqrlad pktgspyasy lqyakienid diltgkkgpq slgikaiddk tlqvtlsepv
      181 pyfismlsht slkpvkrsvi ekfgekwtlp anyvgngayr lkewvvneri vlerspsywn
      241 nkktvidkat flpiasevsd vnrfrsgeid itnsaippnl fakmkkeipe qlhvnpylct
      301 fyyeinnqra pftdprvrta vkltldrdii ankimgqgqi pafsftptft egakftapaw
      361 aswsqeqrna earklleqag fsaakplkft llyntsdqnk qqaiaaasmw kknlgaevtl
      421 rnqewktsle srhqgqydia ratwcgdyne psaflnlvls nssintifyk spafdalmas
      481 tlkapdeaar aalyqqaeaq ldkdsalipv yyrvsarlir psvggftgkd pldytdvknl
      541 yiikq
//
LOCUS       WP_258089621             434 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Serratia liquefaciens].
ACCESSION   WP_258089621
VERSION     WP_258089621.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 434)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 434)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..434
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=46624
     Region          8..428
                     /region_name="PRK15481"
                     /note="transcriptional regulatory protein PtsJ;
                     Provisional"
                     /db_xref="CDD:185378"
ORIGIN      
        1 msslyakggs avqiaeqist qikqgdlqpg dllppvrqla gelgvnpntv asayaklrda
       61 glvatrgrag tqvleqplmt vrnvrqvpeg mgdlasgnld atllpalslg tedvfpqqtg
      121 ydvsgdlpal crlagdwlgq qgaelqepav fsgaldaiek alrihaapga svwvedpcwp
      181 plltllrhlr lkplplpvde qgcrlpekea aplgaavilt praqnptgms lsagraaswr
      241 eflsqnpgcl aivddfwgpl sqrplhlpft adnglyvlsl skflspdlri alacgkpqll
      301 qtmradqyir erwvshilqq iavklwtqaq qeglfaraqq tyqqrrddls erlraltgvp
      361 vssgegvhiw lpvrseaaas qmmaqrgwlv qsgepfrlks gpairislan lepaqletla
      421 qdlavaigtg tvvn
//
LOCUS       WP_258089624             370 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Serratia liquefaciens].
ACCESSION   WP_258089624
VERSION     WP_258089624.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 370)
  AUTHORS   Woodson,K. and Devine,K.M.
  TITLE     Analysis of a ribose transport operon from Bacillus subtilis
  JOURNAL   Microbiology (Reading) 140 (Pt 8), 1829-1838 (1994)
   PUBMED   7921236
REFERENCE   2  (residues 1 to 370)
  AUTHORS   Hogg,R.W., Voelker,C. and Von Carlowitz,I.
  TITLE     Nucleotide sequence and analysis of the mgl operon of Escherichia
            coli K12
  JOURNAL   Mol Gen Genet 229 (3), 453-459 (1991)
   PUBMED   1719366
REFERENCE   3  (residues 1 to 370)
  AUTHORS   Adams,M.D., Wagner,L.M., Graddis,T.J., Landick,R., Antonucci,T.K.,
            Gibson,A.L. and Oxender,D.L.
  TITLE     Nucleotide sequence and genetic characterization reveal six
            essential genes for the LIV-I and LS transport systems of
            Escherichia coli
  JOURNAL   J Biol Chem 265 (20), 11436-11443 (1990)
   PUBMED   2195019
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014684.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02653.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..370
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=39996
     Region          <60..366
                     /region_name="livM"
                     /note="leucine/isoleucine/valine transporter permease
                     subunit; Provisional; PRK11301"
                     /db_xref="CDD:236896"
ORIGIN      
        1 mtilthlqqt dspgraklgv alfmlgllla pwvagaaggn ywvrvidfal lylmlalgln
       61 ivvgltglld mgfiafyavg ayltallssp hlteqfpill qwfpdglhls illliplaai
      121 laalcgillg aptlrlrgdy laivtlgfge ivrilmrnld rplnitngpk gisgidpvsl
      181 fglkfsgmhq wfglrfssly lyyylfaall llilficlrl qhsrvgrawt airededaar
      241 amgintrnfk llafaigatf ggiagalfaa fqgfvspesf tlqesiavla mvvlggmghi
      301 pgvilgalll aalpellrst mgplqqalfg qvwidpeiir qlfyglalil vmlyrpaglw
      361 parhpqgatl
//
LOCUS       WP_258089660             485 aa            linear   BCT 02-MAR-2025
DEFINITION  amino acid permease [Serratia liquefaciens].
ACCESSION   WP_258089660
VERSION     WP_258089660.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..485
                     /product="amino acid permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=53671
     Region          9..467
                     /region_name="AA_permease_2"
                     /note="Amino acid permease; cl45918"
                     /db_xref="CDD:459263"
ORIGIN      
        1 mtkskqhrlk assteghdca qtlqrglser hiqlisigga igtglfmgsg ktialsgtsi
       61 vltyvivgff mfmvmramge llltkldyrs fadfvseylg pkasfflgws ywlswvvtci
      121 advvvcggyi qywypevspw lpalltlgll clfnmlsvkm fgeaefwfai ikviaiiali
      181 vtgawmvfig wtspdgvkas vnnitdpaif mphgilgffa gfqiaifsct giellgtmsa
      241 etkdphkvlp kainvipvri iifyvfsmla iiavtswshi spdsspfvml fdqaglpaaa
      301 avinfvalts amssansgvy sstrmlygls mekhahgqfk ilsrttaipi rslmfscfcm
      361 vvgtmllilm pnvmtlftiv stvaailvvy swgmilaayl vyrkqrpdlh arslfkmpgg
      421 vimtwltlaf faftlvlmif drdtlialcs mplwfitlai vwrfrikdsv aqegyvfyqs
      481 rreae
//
LOCUS       WP_258089809             519 aa            linear   BCT 02-MAR-2025
DEFINITION  PTS transporter subunit EIIC [Serratia liquefaciens].
ACCESSION   WP_258089809
VERSION     WP_258089809.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 519)
  AUTHORS   Reizer,J., Paulsen,I.T., Reizer,A., Titgemeyer,F. and Saier,M.H.
            Jr.
  TITLE     Novel phosphotransferase system genes revealed by bacterial genome
            analysis: the complete complement of pts genes in mycoplasma
            genitalium
  JOURNAL   Microb Comp Genomics 1 (3), 151-164 (1996)
   PUBMED   9689210
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02378.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..519
                     /product="PTS transporter subunit EIIC"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /calculated_mol_wt=56639
     Region          9..516
                     /region_name="PTS-IIBC-alpha"
                     /note="PTS system, alpha-glucoside-specific IIBC
                     component; TIGR02005"
                     /db_xref="CDD:273925"
ORIGIN      
        1 mkdiidnils klqifskamm gpifflpvig lilalssilt natlvnensg vfhigkmigd
       61 tfwplfgnlg lifcigityg lakdkkseaa lvavmcfimf lganssylql sghiaqking
      121 eyygtgqtel lgftvvdmgi flglilgvti awvhnrlcnv elngvlsvyg gsklvliamt
      181 pvimlyavgf sylwpaishg lisltgfmks sgslgvfvyg ffekfliptg lhhfiwspfq
      241 ltsiggsivq dghtvsgsqa iflaymrdps isplmnealr fsqqgmvtif glsgaalafy
      301 htakpekkvl akailipait tsilvgitep ieftflfisp llwvihavlt afsqvacnlf
      361 dvrpwgasgl ieflvynlpl pvaltrwply vviglvqfav yylvfktlvl klnlktpgre
      421 dddgvklysk qeyqnskntp nelsgiiira lggkeniisv dncftrlrve lkdmqlidea
      481 alkstgakgv vksrrevqvi ygvtvgkvks qvekylaal
//
LOCUS       WP_258089825             290 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase [Serratia liquefaciens].
ACCESSION   WP_258089825
VERSION     WP_258089825.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 290)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..290
                     /product="PfkB family carbohydrate kinase"
                     /calculated_mol_wt=30209
     Region          3..271
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
     Site            order(43,248,251)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238177"
     Site            order(183,218,246,249..250,253)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238177"
ORIGIN      
        1 mgkilvtgsl hydivihahh rpekgetvig sgcsykfggk ggnqavaaak agarvgfvga
       61 vgadtqgefl ravldengid nrfvtvnesv asgmsvalmd aegdygavvv snannhidva
      121 qfnddqlwqq vemlllqnev seavnlsaak qakqrgirvc lnaaparslc aemqyavdll
      181 vvngveardl sgipvnnlsd acmaaellsq hypavivtag ehgvawceag drsqsmpaek
      241 velvsthgag dcfmgtlcts ilqheslgss vakanraaaa hvsrkptain
//
LOCUS       WP_258089900             509 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing
            protein [Serratia liquefaciens].
ACCESSION   WP_258089900
VERSION     WP_258089900.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 509)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02737.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..509
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /GO_function="GO:0070403 - NAD+ binding [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=55229
     Region          8..493
                     /region_name="PRK08268"
                     /note="3-hydroxy-acyl-CoA dehydrogenase; Validated"
                     /db_xref="CDD:236211"
ORIGIN      
        1 maenntains vavigagtmg rgiayllaln girtllynrs ahslnqardy ivgdlnkkid
       61 ngkisqqkkg eilanlvfsp vfdaiadsdv vietiaehep tkheilaaia atvkkeaiia
      121 tntsslslnk laagiennsr figlhffnpa plmklieiip syftarvttl rcqqlvtaig
      181 kqfvvckatp gfivnrmarp fylegfrlle envalapqid ralkagghfr mgpleltdfi
      241 gqdinyqvss qiwqdmqydp rytpghlqrs lvdagllgkk ngrsffspsa dtapppaagg
      301 gtlsslhffg ehplfdllqq halatwaplp itrqpehpvl grfiqvndsl avkitdgrta
      361 nqladlagld tfvidvalny antaflvaah sqqatetnka lfltllqavi pqvefvkdsp
      421 glivarvlss linesvimve sgvcsredid iaavagvnya dgifawlaql gqknvkstld
      481 nmaqllhsar yyphysllht trpelavap
//
LOCUS       WP_258089971             407 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Serratia liquefaciens].
ACCESSION   WP_258089971
VERSION     WP_258089971.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..407
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44196
     Region          10..365
                     /region_name="PRK10054"
                     /note="efflux MFS transporter YdeE"
                     /db_xref="CDD:182213"
ORIGIN      
        1 mkgfpplina llvsslvlti grgvtlpfit iyltghfhll pksvgiilgi slaigifasl
       61 yggylvdkfn kntlilisil lfalsffaip wiprpggivv vlailhtays vlgitikacf
      121 adwlpvaqri kafsinytlv nvgwavgssl gvlvagldpl lpfylsggla lftvatlnfi
      181 lgkqpatapv aldatpaarp nfrqtltilr ndrrliyftf gstlgavvfg qfsgylsqyl
      241 itvsnaefay qvigavmivn acivialqyl lsrgmrqenm lrwlalgtlf filgligfwl
      301 agqslwlwil amaiftlgei ivipveymfi dfiapqhlkg syygvqnlsa lggainpvlc
      361 gfilsyaapq mmflmliaaa llsllffflg hrlaqrqqqn anfasae
//
LOCUS       WP_258090007             498 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Serratia liquefaciens].
ACCESSION   WP_258090007
VERSION     WP_258090007.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..498
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=51731
     Region          24..418
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(31..32,35..36,39,70,120..121,123..125,128,148,
                     151..152,155,276,279..280,283..285,315,319,376..377,381,
                     385,401,404..405,408..409,412)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mitnddsrwa dlfsgkngas aialslgval hainilvatt ilpsmvqdig glnlyawntt
       61 lfvvasilgs alsarllsgy garsaylvas lffiagamlc alapsmpvml igrtvqgfgg
      121 glifalsyam inlvfeqrlw pramalisam wgiatlvgpa vggifaelna wrwafgillp
      181 imvlyagftf lilpkgkpqq qaaplpvaql lllavavlvv sagsladsaw vnfggialav
      241 lmmvwlirre ahsrarllpq galrrgspla slyitvsllv vgmtseifvp yflqtlhgqs
      301 plisgyiaat maagwtlsei lssgwrsagm rraiisgplf vfvgllalgv lmptpsgghw
      361 saltpivial tvvgfgigfg wphlltrilq vspeadkdia gasittvqlf atafgaalag
      421 mvanlaglnv pggapgaasa arwlfllfal apllavfsaw rcaaitppvv atsdaevala
      481 spglslsatp vsecvrpe
//
LOCUS       WP_258088600             264 aa            linear   BCT 02-MAR-2025
DEFINITION  RecX family transcriptional regulator [Weissella fangxianensis].
ACCESSION   WP_258088600
VERSION     WP_258088600.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (residues 1 to 264)
  AUTHORS   Alekseev,A., Pobegalov,G., Morozova,N., Vedyaykin,A.,
            Cherevatenko,G., Yakimov,A., Baitin,D. and Khodorkovskii,M.
  TITLE     A new insight into RecA filament regulation by RecX from the
            analysis of conformation-specific interactions
  JOURNAL   Elife 11, e78409 (2022)
   PUBMED   35730924
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 264)
  AUTHORS   Cardenas,P.P., Carrasco,B., Defeu Soufo,C., Cesar,C.E., Herr,K.,
            Kaufenstein,M., Graumann,P.L. and Alonso,J.C.
  TITLE     RecX facilitates homologous recombination by modulating RecA
            activities
  JOURNAL   PLoS Genet 8 (12), e1003126 (2012)
   PUBMED   23284295
REFERENCE   3  (residues 1 to 264)
  AUTHORS   Ragone,S., Maman,J.D., Furnham,N. and Pellegrini,L.
  TITLE     Structural basis for inhibition of homologous recombination by the
            RecX protein
  JOURNAL   EMBO J 27 (16), 2259-2269 (2008)
   PUBMED   18650935
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014668.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02631.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..264
                     /product="RecX family transcriptional regulator"
                     /GO_process="GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /calculated_mol_wt=30312
     Region          4..263
                     /region_name="recX"
                     /note="recombination regulator RecX; Reviewed; cl00936"
                     /db_xref="CDD:470000"
ORIGIN      
        1 mqtvtkvthq rrkgryniyl ddeyafavde kilisynlfk gttldetaid eiktaefsqk
       61 aytkallyat gqmrtsqqvs rklkdqgydw atvkdvvqrl qndhvlddet yaetfvdqak
      121 sagklgprgv kfklqqagid qfviedalva yttddqrdal aervasllek narhskllae
      181 qktqqkllqq gfnqhliqqa iseyreneaf dtdqewenld rdatiaadry aslsgwefkt
      241 kvkaamyrkg ynlnlvdqwl kqsd
//
LOCUS       WP_258090085             302 aa            linear   BCT 02-MAR-2025
DEFINITION  ROK family protein [Serratia liquefaciens].
ACCESSION   WP_258090085
VERSION     WP_258090085.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..302
                     /product="ROK family protein"
                     /calculated_mol_wt=32184
     Region          1..297
                     /region_name="ASKHA_NBD_ROK_NAGK"
                     /note="nucleotide-binding domain (NBD) of
                     N-acetyl-D-glucosamine kinase (NAGK) and similar proteins;
                     cd24057"
                     /db_xref="CDD:466907"
ORIGIN      
        1 mrygfdiggt kiemaaydrq lrqvlcqrvs tptgdyrafl sciqqlvdha drelhtqgsi
       61 giglpgvtdp rsrrqlavnv pcltghclad dlahelarpv eiendcrcfa lseastpqte
      121 hlalvfgaii gtgaggglvm nkqlhkgrng lagewghtpi saqlaqrydl plftcncglt
      181 gcferyvsgs gllalslhfg hradsvpali ahyrhgdpla qrliamyvdi lasalaglql
      241 lldvdafvlg gglsnvgely allppamsaw llpgtepaav yppvhgdssg vrgaallrqs
      301 wq
//
LOCUS       WP_258090055             576 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Serratia
            liquefaciens].
ACCESSION   WP_258090055
VERSION     WP_258090055.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 576)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 576)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 576)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 576)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..576
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=62938
     Region          4..>564
                     /region_name="ABC2_perm_RbbA"
                     /note="ribosome-associated ATPase/putative transporter
                     RbbA; NF033858"
                     /db_xref="CDD:468210"
ORIGIN      
        1 meqvieleal ekrfpslqkp avaslttrlt sgavtglvgp dgagkttllr mlagllkpss
       61 gtlrvagldp iaqdrqlhai lgympqkfgl yedltvmenl tlyadlrgvt gdlrkqtfdr
      121 lltftdltrf tsrlagklsg gmkqklglac tlvgqpqvll ldepgvgvdp isrrelwrmv
      181 helandgmli lwstsyldea eqcrevllln egellfsgap kdltqrmagr tvlitppags
      241 hrallqraic lpavtdgviq gkylrlilke gedhrqvlqa ldlpdaelse aeprfedafi
      301 dllgggpnsk salaeimptv egestetvie aqgltkkfgd faatdhvdfk vqrgeifgll
      361 gpngagkstt fkmmcgllvp tegkalvlgm dlktssgkar qhlgymaqkf slygnltvaq
      421 nlkffsgvyg lsgkeqreki semsrafnfd piinqtpdsl plgfkqrlal acalmhepdi
      481 lfldeptsgv dpltrrefwl hingmvdkgv tvmvtthfmd eaeycdrigl vyrgkiiaag
      541 tpddlkhqva ssenpnpsme qafielvqgy dqeeka
//
LOCUS       WP_258089863            1062 aa            linear   BCT 02-MAR-2025
DEFINITION  RecE family exodeoxyribonuclease [Serratia liquefaciens].
ACCESSION   WP_258089863
VERSION     WP_258089863.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 1062)
  AUTHORS   Mahajan,S.K., Chu,C.C., Willis,D.K., Templin,A. and Clark,A.J.
  TITLE     Physical analysis of spontaneous and mutagen-induced mutants of
            Escherichia coli K-12 expressing DNA exonuclease VIII activity
  JOURNAL   Genetics 125 (2), 261-273 (1990)
   PUBMED   2199308
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018353.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06630.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..1062
                     /product="RecE family exodeoxyribonuclease"
                     /GO_function="GO:0051908 - double-stranded DNA 5'-3' DNA
                     exonuclease activity [Evidence IEA]"
                     /GO_process="GO:0090304 - nucleic acid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=118301
     Region          2..1059
                     /region_name="PRK09709"
                     /note="exodeoxyribonuclease VIII"
                     /db_xref="CDD:236615"
ORIGIN      
        1 mqnvyafylk akqktgkpsl fiwfdakndd raqrdlanyi edaelepkdy fkaartdypv
       61 yddlppegef sdtwcdryel gedkltwqki vapvvisekl qekpkvaaey faanldkhtv
      121 iaaawlygre clklneeqlk aakalvmdds qrypqnvila lsrlkqhefi ypempivaia
      181 amkavwlpfg kvpelgklcq fateyldakv edradvitkw qtggakpaek aeeqrrtesg
      241 ailtngtepa tgtpidseqm letvigcaly psdfdisnpp gsiiravtem kkrndktlka
      301 wneqlsntpg vlqfsreaiv slirgaeenl hltpgalrty inanlieidt qtvqqktetv
      361 qqngadaqqt aidshqiasn eggkeevatv dtpvvefete rrawirgevv aalsgdtgvm
      421 geddvaelma aigegvshty varllakeie pcdpfqqlaa deihhltcdv lenwldekdp
      481 rvafingrve fylkearqal eqasianqre nvemaqpdas negektevar qhqsgelrsm
      541 gsgqfdvstl faesplanvt vdepasndfr enedlttknv reflnsstka advsgetakf
      601 sgeridtpaq devqsgstaa addaqhreep patapayfep gryldipnev yhsangisst
      661 makdarislm yyhgrhviks iqrertdalt fgslvhtlal epekldaefs veplipegaf
      721 tdtasmrafi dkhnaalpkq adadtlravi ekhnatlpvp yalggnadei gqfygllpve
      781 fqrigedqkp tatamkacik eynatlpvpl ktsgsrdall eqleaidpvl veleraipap
      841 lpvsgskeem atriktilpt aifadelisa wrnandqrqp itqqqiqyak aiqralfthp
      901 sagpllqhpq ravevsyfgi deetgldvrv rpdleieagg mrtgfdlktv tmgnvkqsal
      961 rarlhreiie rdyhlsagmy cdvaafdqff wifvnkdehy hwiaiveasa dllelgrley
     1021 rktlrdikka qdtgvwpepi teeivddind fdqrrmealr va
//
LOCUS       WP_258090177             236 aa            linear   BCT 02-MAR-2025
DEFINITION  trehalose-6-phosphate synthase [Serratia liquefaciens].
ACCESSION   WP_258090177
VERSION     WP_258090177.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 236)
  AUTHORS   Campbell,J.A., Davies,G.J., Bulone,V. and Henrissat,B.
  TITLE     A classification of nucleotide-diphospho-sugar glycosyltransferases
            based on amino acid sequence similarities
  JOURNAL   Biochem J 326 (Pt 3) (Pt 3), 929-939 (1997)
   PUBMED   9334165
  REMARK    Erratum:[Biochem J 1998 Feb 1;329(Pt 3):719]
REFERENCE   2  (residues 1 to 236)
  AUTHORS   Kaasen,I., McDougall,J. and Strom,A.R.
  TITLE     Analysis of the otsBA operon for osmoregulatory trehalose synthesis
            in Escherichia coli and homology of the OtsA and OtsB proteins to
            the yeast trehalose-6-phosphate synthase/phosphatase complex
  JOURNAL   Gene 145 (1), 9-15 (1994)
   PUBMED   8045430
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013173.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00982.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..236
                     /product="trehalose-6-phosphate synthase"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_process="GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=27070
     Region          1..>235
                     /region_name="OtsA"
                     /note="Trehalose-6-phosphate synthase, GT20 family
                     [Carbohydrate transport and metabolism]; COG0380"
                     /db_xref="CDD:440149"
ORIGIN      
        1 msrlvlisnk qcdskdlaca tqalspdsqs dddrglwlgw ngdvqnfgda plrpvsyqhr
       61 sgyeqvtfpl steefhfhyq gyyhdglwpv fhnhpekahf tpenyrayrq lnrhfadiac
      121 eyvcpndiic iddyqllpcg qalkeqglln pcafffhlpf pstallrqip ehhglieslf
      181 fydligfqtl ddrnnflsyl theypveilp dsqlqvnghi fatgifpagi narkiy
//
LOCUS       WP_258090179             242 aa            linear   BCT 02-MAR-2025
DEFINITION  Fic family protein [Serratia liquefaciens].
ACCESSION   WP_258090179
VERSION     WP_258090179.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 242)
  AUTHORS   Garcia-Pino,A., Christensen-Dalsgaard,M., Wyns,L., Yarmolinsky,M.,
            Magnuson,R.D., Gerdes,K. and Loris,R.
  TITLE     Doc of prophage P1 is inhibited by its antitoxin partner Phd
            through fold complementation
  JOURNAL   J Biol Chem 283 (45), 30821-30827 (2008)
   PUBMED   18757857
REFERENCE   2  (residues 1 to 242)
  AUTHORS   Lehnherr,H., Maguin,E., Jafri,S. and Yarmolinsky,M.B.
  TITLE     Plasmid addiction genes of bacteriophage P1: doc, which causes cell
            death on curing of prophage, and phd, which prevents host death
            when prophage is retained
  JOURNAL   J Mol Biol 233 (3), 414-428 (1993)
   PUBMED   8411153
REFERENCE   3  (residues 1 to 242)
  AUTHORS   Komano,T., Utsumi,R. and Kawamukai,M.
  TITLE     Functional analysis of the fic gene involved in regulation of cell
            division
  JOURNAL   Res Microbiol 142 (2-3), 269-277 (1991)
   PUBMED   1656497
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014691.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02661.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..242
                     /product="Fic family protein"
                     /calculated_mol_wt=27609
     Region          1..198
                     /region_name="FIDO"
                     /note="Fido, protein-threonine AMPylation domain [Signal
                     transduction mechanisms]; COG2184"
                     /db_xref="CDD:441787"
ORIGIN      
        1 mifdpfgdfd aagylqntlh lkepaeikks ehlsfelsie dalsylaqtk hinyssvlkv
       61 heilfsdfyp wagkdrnelv phlavfkgse knsrhtvfer pdsirlavdy alrlavdker
      121 frerpgevmg llafahpfld gngrtillvf melsfragft inwpesnknd ylqaltdein
      181 apsqrhldhy lqpfvvdiss rddwptiigg ikgldgldke nisygslddp eiqknymtyr
      241 gk
//
LOCUS       WP_258090218             174 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-dependent oxidoreductase [Serratia liquefaciens].
ACCESSION   WP_258090218
VERSION     WP_258090218.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 174)
  AUTHORS   Li,R., Bianchet,M.A., Talalay,P. and Amzel,L.M.
  TITLE     The three-dimensional structure of NAD(P)H:quinone reductase, a
            flavoprotein involved in cancer chemoprotection and chemotherapy:
            mechanism of the two-electron reduction
  JOURNAL   Proc Natl Acad Sci U S A 92 (19), 8846-8850 (1995)
   PUBMED   7568029
  REMARK    Erratum:[Proc Natl Acad Sci U S A 1995 Nov 7;92(23):10815]
REFERENCE   2  (residues 1 to 174)
  AUTHORS   Fischl,A.S. and Kennedy,E.P.
  TITLE     Isolation and properties of acyl carrier protein phosphodiesterase
            of Escherichia coli
  JOURNAL   J Bacteriol 172 (9), 5445-5449 (1990)
   PUBMED   2168383
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014573.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02525.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..174
                     /product="NAD(P)H-dependent oxidoreductase"
                     /calculated_mol_wt=19579
     Region          2..164
                     /region_name="FMN_red"
                     /note="NADPH-dependent FMN reductase; cl00438"
                     /db_xref="CDD:469770"
ORIGIN      
        1 msrilvltah rfpdesrink aliealrplp dvtvhelmra ypdyqidvar eqellqnhda
       61 vvmlfpfywy sspailsewq davltygfay gsegtqlhgk plqlvvttgg nqqaytaegy
      121 nrypvedllr pfhamanltg mdyllphlvq gvfdmsderl aqeaagvval lkke
//
LOCUS       WP_258090240             175 aa            linear   BCT 02-MAR-2025
DEFINITION  fimbrial protein [Serratia liquefaciens].
ACCESSION   WP_258090240
VERSION     WP_258090240.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012635.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00419.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..175
                     /product="fimbrial protein"
                     /GO_component="GO:0009289 - pilus [Evidence IEA]"
                     /GO_process="GO:0007155 - cell adhesion [Evidence IEA]"
                     /calculated_mol_wt=18888
     Region          17..175
                     /region_name="Fimbrial"
                     /note="Fimbrial protein; cl01416"
                     /db_xref="CDD:445401"
ORIGIN      
        1 mttkrlpisg kmsalsmavv lllnsaimta akaaqtgdsk rvnfhgtlkk kpchiandqn
       61 idvyfekvgg krvdgqrymq pvpytlscde vdpswmlmls vrgiptgfed talqtnangl
      121 girilqdgkp mqinkpiais ygsppmlqav pvqqsgvkls eqtfsatatl maeyq
//
LOCUS       WP_258090266             407 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Serratia liquefaciens].
ACCESSION   WP_258090266
VERSION     WP_258090266.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..407
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=42386
     Region          22..372
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(29..30,33..34,37,69,131..132,134..136,139,159,
                     162..163,166,233,236..237,240..242,245,273,277,324..325,
                     329,333,346,349..350,353..354,357)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340888"
ORIGIN      
        1 mhissppksp piantspsnw plalcagllg igqngllval pvlvsmtqls lsvwaglltl
       61 gsmlflvgsp wwgrqseirg ckfvvtmala gylfsfalla lavwglaagw lsstlglsgl
      121 iaariiyglt vsgmvpasqt walqragyeq rmsalatiss glscgrllgp lcaalalsih
      181 pmaplwlmal apliallvvc rqhndpplpp vahqqnrlrl nmvpyllcal llaasvslmq
      241 lglvphltgl fshsattvsh hvavllsvaa actllaqflv vrpqrfsasq llliaavlmi
      301 vglglmcaqp lalfyvgcal asfgaamatp gyqlmlndkl stgkgsgaia tshtlgygls
      361 almvpvvakf ygesqliaaa ltmavllggi sgwlwrqhri sansage
//
LOCUS       WP_258090278             448 aa            linear   BCT 02-MAR-2025
DEFINITION  condensation domain-containing protein [Serratia liquefaciens].
ACCESSION   WP_258090278
VERSION     WP_258090278.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 448)
  AUTHORS   Stachelhaus,T., Mootz,H.D., Bergendahl,V. and Marahiel,M.A.
  TITLE     Peptide bond formation in nonribosomal peptide biosynthesis.
            Catalytic role of the condensation domain
  JOURNAL   J Biol Chem 273 (35), 22773-22781 (1998)
   PUBMED   9712910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012873.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00668.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..448
                     /product="condensation domain-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=49769
     Region          7..>439
                     /region_name="entF"
                     /note="enterobactin non-ribosomal peptide synthetase EntF;
                     PRK10252"
                     /db_xref="CDD:236668"
ORIGIN      
        1 msetvlatew lpltpaqldf wdeftlhpgq pfstvahvte lrgavdeeal craitqtmae
       61 tqafalrfhg gtgeslpqqr ydpqaipqln rldlqaqpdp yqtamrlmqa dvdqpldlcs
      121 qpvaavwlir lgpsrfiwym rahhividgf gmalvehrca alyahfldds aaghalgeir
      181 afqhhelaya asercakdry fwqrylppsq tlptvrkggr eygvkslsts tplpeeipqr
      241 lrwlsersgi gwpdlllsls aawlfftlpp lphdkgdsrt mwmpvmnrrs sqatntpala
      301 vntlpllvsl raeetlghfl sgmakmlrel rshagyrlrh iaadrgvtpa srlfispfin
      361 vqpfdpagfs gctctrrvla ggsgdganlt frgrtdagdl hldidvyvqq facdgiedyg
      421 rdlqafllra lreealetal gelvavpa
//
LOCUS       WP_258090502             460 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Serratia liquefaciens].
ACCESSION   WP_258090502
VERSION     WP_258090502.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..460
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=49569
     Region          11..444
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(18..19,22..23,26,58,108..109,111..113,116,136,
                     139..140,143,267,270..271,274..276,279,307,311,363..364,
                     368,372,388,391..392,395..396,399)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mpyrikvaiv yllgffvdli nmfianvayp sighalqasv gelawvsngy ilgltlvipl
       61 sawlaqrigg rrvfllsltl fmlataaagy adsigelvgw rvlqgmgggl lipigqtlty
      121 qlyrsherag lsaaimlvgl lapalspalg glivdrldwr wvffanlpla alalllaalw
      181 lrpqvpdpqr rpleikglls actaltltll gltrlgengg laqgalllaa gaialtyflr
      241 rslrithpll nlrlvqdpll rtsmmiyqci pglfigvsli amlylqnqlg mraaqvgslm
      301 lpwslasfla itltgrkfnh fgpkplfifg cllqglgila lsqiahagdy glqvaafalm
      361 gfggslcsst aqssaflhia deqladasal wninrqlsfc lgvallslll nlllehftpa
      421 vaykscfyla aastlipmll clrianraiv rrlntqqehq
//
LOCUS       WP_258090629             256 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6708 domain-containing protein [Serratia liquefaciens].
ACCESSION   WP_258090629
VERSION     WP_258090629.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042867.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20455.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..256
                     /product="DUF6708 domain-containing protein"
                     /calculated_mol_wt=29421
     Region          94..256
                     /region_name="DUF6708"
                     /note="Family of unknown function (DUF6708); pfam20455"
                     /db_xref="CDD:466604"
ORIGIN      
        1 mtnpklnppc tgwqedlppp nlaptvppti wrnatnhlds yylelsrvaf rarglllcmg
       61 lflltwlivs nigpvsffha ekasiffagl vstiicfwia lavirldisp prdlpirfnr
      121 arqriyaynf kyrwwnpfer wqvvpvaydw sqvraerwkk rgmtahgaii ikwgvvlsiv
      181 kpgtndvidr fplstmgade fawayictym qqgpgalpps elsrdhndvp wynlaqrlap
      241 kvrwpiemdh esrtap
//
LOCUS       WP_258090630             202 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6708 domain-containing protein [Serratia liquefaciens].
ACCESSION   WP_258090630
VERSION     WP_258090630.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042867.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20455.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..202
                     /product="DUF6708 domain-containing protein"
                     /calculated_mol_wt=23375
     Region          47..202
                     /region_name="DUF6708"
                     /note="Family of unknown function (DUF6708); pfam20455"
                     /db_xref="CDD:466604"
ORIGIN      
        1 mflfspllai ctvvsistll piagepysye fmfigifafv vcffaflhsl khsispprdl
       61 pirfnrarqr iyaynfkyrw wnpferwqvv pvaydwslvr aerwkkrgmt ahgaiiikwg
      121 vvlsivkpgt ndvidrfpls tmgadefawa yictymqqgp galppselsr dhndvpwynl
      181 alrlapkvkw piemdhesrt tp
//
LOCUS       WP_258090688             303 aa            linear   BCT 02-MAR-2025
DEFINITION  arginase family protein [Serratia liquefaciens].
ACCESSION   WP_258090688
VERSION     WP_258090688.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00491.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..303
                     /product="arginase family protein"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=32676
     Region          2..297
                     /region_name="Arginase_HDAC"
                     /note="Arginase-like and histone-like hydrolases; cl17011"
                     /db_xref="CDD:450134"
     Site            order(96,118,120,122,230,232,275)
                     /site_type="active"
                     /db_xref="CDD:212513"
     Site            order(118,120,232)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:212513"
ORIGIN      
        1 mqiilaptnl glrplrpghi pgtwrapqal maqglaqrla aeaihelvsp tysplapsgt
       61 rirnghaira fnlelaaeva avqargdfpl vivgdcsill galagarrag plslvhidgh
      121 sdfrhpgnyd pqqmlgavag mdlalatgrg ealltewpgv agplvpdrqv lqlgerecrd
      181 adfawpdinq taitridvfa anlmgraeii rhidqmlaae pawrfwlhld vdvldqavmp
      241 avdspgspgi drlwleniga kllqnplccg mtvsvfdpdl dpdnryaali vemlaamfhr
      301 hkp
//
LOCUS       WP_258090692             278 aa            linear   BCT 02-MAR-2025
DEFINITION  TIM barrel protein [Serratia liquefaciens].
ACCESSION   WP_258090692
VERSION     WP_258090692.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 278)
  AUTHORS   Fry,J., Wood,M. and Poole,P.S.
  TITLE     Investigation of myo-inositol catabolism in Rhizobium leguminosarum
            bv. viciae and its effect on nodulation competitiveness
  JOURNAL   Mol Plant Microbe Interact 14 (8), 1016-1025 (2001)
   PUBMED   11497462
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013429.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01261.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..278
                     /product="TIM barrel protein"
                     /calculated_mol_wt=30748
     Region          1..278
                     /region_name="COG4130"
                     /note="Predicted sugar epimerase, xylose isomerase-like
                     family [Carbohydrate transport and metabolism]"
                     /db_xref="CDD:443306"
ORIGIN      
        1 mtiapdrfci nrkiapnldl eqffslvkkc glnkvelrnd mssgkvtdnl sndqlnalae
       61 kygieivtin algmfnlled qaallknaea llsqaqairs kalvlcphcs agdnrseeqk
      121 ktdtlaalkl laplfrqygv qgyveplgfg isslrssllt qslirdsgap ykivldtfhh
      181 ylsdvtqpef daqiqidgig lvhlsgvedl rtksalsdee rimlsdkdrl eskkqvqnle
      241 rlgytgiyaf epfssqldsw taadiereir qsiallqg
//
LOCUS       WP_258090757            1615 aa            linear   BCT 02-MAR-2025
DEFINITION  hemagglutinin repeat-containing protein [Serratia liquefaciens].
ACCESSION   WP_258090757
VERSION     WP_258090757.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024728.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13332.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1615
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     Protein         1..1615
                     /product="hemagglutinin repeat-containing protein"
                     /calculated_mol_wt=166731
     Region          38..284
                     /region_name="TPS"
                     /note="TPS secretion domain; pfam05860"
                     /db_xref="CDD:461762"
     Region          401..>452
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          631..773
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          724..851
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          931..1092
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          1024..1177
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          1115..1287
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
     Region          1210..1382
                     /region_name="Fil_haemagg_2"
                     /note="Hemagglutinin repeat; pfam13332"
                     /db_xref="CDD:433123"
ORIGIN      
        1 mknnnfslsg agklaaslai ilaslgsaya geivaangan gpgvstagng aqvvnivtpn
       61 dhglshnqyq dfnvnqpgav lnnsldagrs qlagqlaanp nlnnqaasvi lnevisrnps
      121 llhgqqeifg maadyvlanp ngiscdgcgf intsrsslvv gnplvengml qgystlgnrn
      181 tlsldgrlna sgvldliapr insrgeviva plydkksdkm isainaisgn nrvsgdaqvl
      241 sseqpeltvw dqllgttdsy ylgsmqagri niihtvtgsg vklagkldgs deirvkayni
      301 rtdsqvndss snrnsgenyq nyrggiyind rstgqqlart elkgknislv adnsnhltat
      361 dvrgeeitlq gasltldgrq lkqtqghtde rwfyswkynv treneqlqqa tsnieatknv
      421 tltateqdvt lrgakvsagn alsidakrdv qlsglierek tsergnqrnh tpslrtgsws
      481 nsneteslks ssvfsggdla ikagnrvvgq gtkvyasgdl kvdandqini gvqktanekt
      541 vrdnktswgg igggnnqdns nrrevsnasq vtadgtlwln gkqgviitgs tvkgakggfv
      601 aatdgglrid nalsttvdkv dartgtvfni tsssqksnns hqqstaselv sdtnlqlvsk
      661 kdtdvvgskv tstgklevna ggninvssge qqqhideqkt alaingyane ksdkqyragl
      721 riehtsdsek ttrseqqsst lsggsvalka dkdvtfsgsk lvttqgdasv sgdsvaflaa
      781 dnkttsdtek tkigggvyyt ggidkvgsgi eggyenskth sqsskavtsg sdiagnltin
      841 akdkltqqga qhqvggkyqe nansvdhlaa vnsessnttk tdvgvdigan vdysavtrpv
      901 eravgkvakl dangvineig gigapnigld iganggssek snsssqavvs kitagsidvk
      961 asgklqdtgt qyqatqgsva ltadshhsea aknsqqesss etrggasvrv ytttgsdltv
     1021 dakgeggnkh sestgsqavt gsitaangid ikvkqdavyq gtsleagdgk akvkaedgni
     1081 rfvqatdtsh eshngfnvkv sakggttpet ksfglglggg ysngksdgss aqvsniggkq
     1141 gvevdagrgl tlqgsnvtsq gdvslkagdk valqaaqsqq trkddtlsgn idiggnstdn
     1201 dkksagglsl ggafdiakvd etsttqqggk itsggavtis akgndahalh lqgtevkgss
     1261 vglnaenggv vlesvqnqeq knnwnlglka nakggqsfnk dangkvdtts gsdthtlgag
     1321 vkvgvdnlqk ttqgnslisa gevtinsgkd tqlagarida dsvqgniggd lrvesrkdse
     1381 ssvkvdvdvg lshtndpass itsklskvgt phyagkvkek legginkvad attdkynsva
     1441 rrldpkqdtt gavsfskaeg kvtlpetlag ekekgplwdr garflgnksk esltgpaglq
     1501 gqfkvkadvv nndavgvqsa ingkndvaln vqgttrltgg eirskqgevt lgngkleqqd
     1561 vagnryqggg hldaaasaga llgiagksvv nletpvggyi nnqaadakag vfsgk
//
LOCUS       WP_258090487             515 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA recombination protein RmuC [Serratia liquefaciens].
ACCESSION   WP_258090487
VERSION     WP_258090487.1
KEYWORDS    RefSeq.
SOURCE      Serratia liquefaciens
  ORGANISM  Serratia liquefaciens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (residues 1 to 515)
  AUTHORS   Slupska,M.M., Chiang,J.H., Luther,W.M., Stewart,J.L., Amii,L.,
            Conrad,A. and Miller,J.H.
  TITLE     Genes involved in the determination of the rate of inversions at
            short inverted repeats
  JOURNAL   Genes Cells 5 (6), 425-437 (2000)
   PUBMED   10886369
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014680.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02646.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Serratia liquefaciens"
                     /db_xref="taxon:614"
     gene            1..515
                     /gene="rmuC"
     Protein         1..515
                     /product="DNA recombination protein RmuC"
                     /calculated_mol_wt=58721
     Region          1..510
                     /region_name="PRK10361"
                     /note="DNA recombination protein RmuC; Provisional"
                     /db_xref="CDD:182409"
ORIGIN      
        1 mdtslvygig gvtiglllgw liaslrvqqs hsqhetelrl leqslqqaqq etaarqetll
       61 rneqqmrqnd melrnlhsql aagheklqql nhwrnecell nqelraqrev nsaqeaelre
      121 vtirleetrm aaeekqrlli nseqrlttqf enlanrifeh sgrkvdeqnk qsldrlllpl
      181 reqldgfrrq vqdsfgqear erhtltheir nlqqlnaqma reainltkal kgdnktqgnw
      241 gevvlsrvle asglreghey etqvnvrldh qsrmqpdviv rlpqgkdvvi dakmslvaye
      301 ryfnsedeve reaalsehia svrghirllg rkdyqqlpgl rsldyvlmfi pvepafllai
      361 drepelisea lkhnimlvsp ttllvalrti tnlwryehqs qnaqriadra arlydkmrlf
      421 vddmsalgqs ldkaqgsyrq amnklsegrg nligqtegfr algvevkrpi npllaqqasa
      481 qhdeefeaag eddidalpga edddaaeqpr sasqa
//
LOCUS       WP_258090851             717 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Wohlfahrtiimonas
            chitiniclastica].
ACCESSION   WP_258090851
VERSION     WP_258090851.1
KEYWORDS    RefSeq.
SOURCE      Wohlfahrtiimonas chitiniclastica
  ORGANISM  Wohlfahrtiimonas chitiniclastica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cardiobacteriales; Ignatzschineriaceae; Wohlfahrtiimonas.
REFERENCE   1  (residues 1 to 717)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Wohlfahrtiimonas chitiniclastica"
                     /db_xref="taxon:400946"
     Protein         1..717
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=79206
     Region          9..717
                     /region_name="PRK13483"
                     /note="ligand-gated channel protein"
                     /db_xref="CDD:184080"
ORIGIN      
        1 mldakswkmn glavmvasvc mqahaeeavd etvvnlsqvv vtasgfgqai kdapasisvi
       61 sgaqltdkpi tglggalqdv egvsverggk sgganisirg lpsdytlimi dgkrlsqnsr
      121 garpngfgdv dsnfippmsa ieqievvrgp mstlygsdam ggvvniitkk vpaqwggefn
      181 igwtepqkts kfaskmntsl yaagpliket lglaimagyd hagnakgkfp knakeaandd
      241 ytgqynqfsg lgkrknynyg aklsftpdaq ndiilnyerg vqrfdnneeq lgtlnssvkp
      301 nkkgqrvggg ysdelkftrd rlslshqgry davtvdsail wdqtktlgri nplsakpmpy
      361 dgtprdikyt niivdnkwmf glgdhfitag gqykhqkltd glasapldvk qwqwalfved
      421 ewsvsdafia tfglrydkne dfgshfspri yltwnvddaw qvkggvsraf rapdlqlmrn
      481 divgygrqga lplvgnpdlk petstsaelg vyfdnqanfs anatlfytkf kdkintetkp
      541 sgqiagidlt gfaeaaqyrn vddakvygie agmryrmidn vvvslnytyt dssfkdendr
      601 kipfsetpkh mvnakvnwdi ndawstwldg eyrakqyqgl tdagakvyyk pyaimnlgak
      661 yqvneqlsfs agidnllnkn fadyqapria skrtdftnry rrleegrrfw vtakyif
//
LOCUS       WP_258090908            1132 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Wohlfahrtiimonas chitiniclastica].
ACCESSION   WP_258090908
VERSION     WP_258090908.1
KEYWORDS    RefSeq.
SOURCE      Wohlfahrtiimonas chitiniclastica
  ORGANISM  Wohlfahrtiimonas chitiniclastica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cardiobacteriales; Ignatzschineriaceae; Wohlfahrtiimonas.
REFERENCE   1  (residues 1 to 1132)
  AUTHORS   Mande,S.S., Sarfaty,S., Allen,M.D., Perham,R.N. and Hol,W.G.
  TITLE     Protein-protein interactions in the pyruvate dehydrogenase
            multienzyme complex: dihydrolipoamide dehydrogenase complexed with
            the binding domain of dihydrolipoamide acetyltransferase
  JOURNAL   Structure 4 (3), 277-286 (1996)
   PUBMED   8805537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07992.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Wohlfahrtiimonas chitiniclastica"
                     /db_xref="taxon:400946"
     Protein         1..1132
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=125705
     Region          11..1115
                     /region_name="PRK06567"
                     /note="putative bifunctional glutamate synthase subunit
                     beta/2-polyprenylphenol hydroxylase; Validated"
                     /db_xref="CDD:235832"
ORIGIN      
        1 mtdfndlwrp yalsfdalkt teglvsldel flkslspeln stikawrnna ltltaietse
       61 lqleiarhln rfisetlkie dhtnfyfeqa adeaivlefk nryvqrgakr ykqeitesfn
      121 alteqvmtks gataenfefa lakyamalea esseektvie watlalntde gkaltqhwvs
      181 fkfpervdpq alvnsteitf kgipvkkgdg kdrrrdgfhl tdsrmcdhdi agetdyckyc
      241 hdhdgdfcsk gfpvkkaqpe lglkkdafgn tqtgcpldek isemitlrks ghvvgalami
      301 mienpmvpat ghricndcmk aciyqktepv nipqietnvl tsvlnlpwgv eiydiftrwn
      361 plkqtdylpt estnrkvlvs glgpagftmt hylsqagchv vavdglkiep lpeallngpv
      421 ehwssleedl anrilygfgg vaeygitvrw dknflrliyl vlarrnnvqi fggvrlggtl
      481 mledafkmgf dhvsmavgag lprvlniens largmrqasd flmamqltga akqtslstlq
      541 vrmpavvigg gltavdaate mqayyikqve kvlhrvetlg eeavraklft pedhdildef
      601 lthgrevkte reraaaagea pnftpllhkw ggvllayrrt mqespaytln heeitkafee
      661 gifygeslnp tgvnldkygh iesisftkng edvtipartv lvaagtspnt iyatehgtle
      721 vedqhhfqgy dilgnkveyd rsktvkddfa pftsfnhkdh rvsyigdthp tfngnvvkai
      781 tsakrtadqv ieamkalpan hidnaelsrv mtegltvtie svkldnpava evwvkapfva
      841 rnfkpgqffr lqtyevdgqi vddtrlqipl ftasgtgskd dairlmvfqw gvaprlvsrl
      901 kkgdrlvlag ptgaptdipt nknilimagr wgtaimldla pvlreagnki tyiatlgqas
      961 emdkmdelea stdqivwcvq kgekvtarra qdssvvatdm iellheldkd gvvdlssidr
     1021 mlalgstsll kglqkelseg grltpifkad vevmgtvgsp mqcmmkgvcg qclqwqidpi
     1081 tkkrtkavft cagqdqnvke idldnltart sqnrlldvln vawfdyilkk id
//
LOCUS       WP_258090975             443 aa            linear   BCT 02-MAR-2025
DEFINITION  MATE family efflux transporter [Wohlfahrtiimonas chitiniclastica].
ACCESSION   WP_258090975
VERSION     WP_258090975.1
KEYWORDS    RefSeq.
SOURCE      Wohlfahrtiimonas chitiniclastica
  ORGANISM  Wohlfahrtiimonas chitiniclastica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cardiobacteriales; Ignatzschineriaceae; Wohlfahrtiimonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01554.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Wohlfahrtiimonas chitiniclastica"
                     /db_xref="taxon:400946"
     Protein         1..443
                     /product="MATE family efflux transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=48893
     Region          1..432
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 msqktlrllf isyviptlga mlisgtyqli dgffighfig peglagvnig wsyitvllgf
       61 gllvgvgtgs lysiakgaed detartiigq siplilipgl ifgiilyvaa pslvymlgdp
      121 qyqvsktfqt aalmavdfir vfavssplvi gslalpflvr nmgnpyratl ymaigvtini
      181 icsyfmivvw ewsifgaala siigescamf lglyyilyqs genlqwrhfk prpkllkeiv
      241 ingastffmy iyvgfimmlh hmmlvkyggt iavsaytitg yivtiyylgm egiangvqpi
      301 isrlygrenf lstraiirmm vivgmtygig ltillqifpg fftllftsdq elskvtihai
      361 nihlsllfle gvfvmvtvff qaigegskal visignlliq vpfllivpky fgldgvwism
      421 plssfllaip vvywayiryr hiv
//
LOCUS       WP_258091063             210 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine phosphate synthase [Wohlfahrtiimonas chitiniclastica].
ACCESSION   WP_258091063
VERSION     WP_258091063.1
KEYWORDS    RefSeq.
SOURCE      Wohlfahrtiimonas chitiniclastica
  ORGANISM  Wohlfahrtiimonas chitiniclastica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cardiobacteriales; Ignatzschineriaceae; Wohlfahrtiimonas.
REFERENCE   1  (residues 1 to 210)
  AUTHORS   Hazra,A.B., Han,Y., Chatterjee,A., Zhang,Y., Lai,R.Y., Ealick,S.E.
            and Begley,T.P.
  TITLE     A missing enzyme in thiamin thiazole biosynthesis: identification
            of TenI as a thiazole tautomerase
  JOURNAL   J Am Chem Soc 133 (24), 9311-9319 (2011)
   PUBMED   21534620
REFERENCE   2  (residues 1 to 210)
  AUTHORS   Zhang,Y., Taylor,S.V., Chiu,H.J. and Begley,T.P.
  TITLE     Characterization of the Bacillus subtilis thiC operon involved in
            thiamine biosynthesis
  JOURNAL   J Bacteriol 179 (9), 3030-3035 (1997)
   PUBMED   9139923
REFERENCE   3  (residues 1 to 210)
  AUTHORS   Pang,A.S., Nathoo,S. and Wong,S.L.
  TITLE     Cloning and characterization of a pair of novel genes that regulate
            production of extracellular enzymes in Bacillus subtilis
  JOURNAL   J Bacteriol 173 (1), 46-54 (1991)
   PUBMED   1898926
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014622.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02581.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Wohlfahrtiimonas chitiniclastica"
                     /db_xref="taxon:400946"
     Protein         1..210
                     /product="thiamine phosphate synthase"
                     /calculated_mol_wt=22586
     Region          1..194
                     /region_name="TIM-like beta/alpha barrel domains"
                     /note="A large family of domains similar to triose
                     phosphate isomerase (TIM) which, in general, share an
                     eight beta/alpha closed barrel structure; cl21457"
                     /db_xref="CDD:473867"
     Site            order(5,7,33,35,78,101,119,126,128,152,156,173..176)
                     /site_type="other"
                     /note="thiamine phosphate binding site [chemical binding]"
                     /db_xref="CDD:238317"
     Site            order(33,35,37,63..64,83,101,126,128..129,156,175..176)
                     /site_type="active"
                     /db_xref="CDD:238317"
     Site            order(35,37,63..64,80,83,101,129)
                     /site_type="other"
                     /note="pyrophosphate binding site [ion binding]"
                     /db_xref="CDD:238317"
ORIGIN      
        1 mfqihavtan qaqsieqlse hivallpyvd yvqireksrs pkaiaalidr iaqhapthql
       61 ilndrtdial amgiervhlt esslplavlk nafpsvqfgr sfhngaqira qlpeyaygyi
      121 ghifqtrlkt dpplglaglt aiakekragt liaiggidea niasiapivd gvavmsglfe
      181 rsiaqsiaha kslkllaeqa iidarrtcgn
//
LOCUS       WP_258091085             270 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Wohlfahrtiimonas
            chitiniclastica].
ACCESSION   WP_258091085
VERSION     WP_258091085.1
KEYWORDS    RefSeq.
SOURCE      Wohlfahrtiimonas chitiniclastica
  ORGANISM  Wohlfahrtiimonas chitiniclastica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cardiobacteriales; Ignatzschineriaceae; Wohlfahrtiimonas.
REFERENCE   1  (residues 1 to 270)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 270)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 270)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 270)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Wohlfahrtiimonas chitiniclastica"
                     /db_xref="taxon:400946"
     Protein         1..270
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=29950
     Region          2..249
                     /region_name="COG4559"
                     /note="ABC-type hemin transport system, ATPase component
                     [Inorganic ion transport and metabolism]"
                     /db_xref="CDD:443620"
ORIGIN      
        1 mmleihdlty diktrhgvrt lvniprlsiq khqltaligp ngagkttllh llsgdteptt
       61 grieldgrnl qhypiehlak kravlpqlqh ipfaisvmai lsmglmpygi heqhpqgkal
      121 iaevaeslql shlldrtyqa lsggeqhrvq igrvlvqslf eletagedrl llldepfnhl
      181 dlyhqkhllk yfdclrarkm tivcvmhdln qalhaaddci ilakgelqgv ypaaslkdga
      241 ilgqvfqipf iqlnnanhpn ahalsifgge
//
LOCUS       WP_258091137              43 aa            linear   BCT 02-MAR-2025
DEFINITION  Com family DNA-binding transcriptional regulator [Wohlfahrtiimonas
            chitiniclastica].
ACCESSION   WP_258091137
VERSION     WP_258091137.1
KEYWORDS    RefSeq.
SOURCE      Wohlfahrtiimonas chitiniclastica
  ORGANISM  Wohlfahrtiimonas chitiniclastica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cardiobacteriales; Ignatzschineriaceae; Wohlfahrtiimonas.
REFERENCE   1  (residues 1 to 43)
  AUTHORS   Morgan,G.J., Hatfull,G.F., Casjens,S. and Hendrix,R.W.
  TITLE     Bacteriophage Mu genome sequence: analysis and comparison with
            Mu-like prophages in Haemophilus, Neisseria and Deinococcus
  JOURNAL   J Mol Biol 317 (3), 337-359 (2002)
   PUBMED   11922669
REFERENCE   2  (residues 1 to 43)
  AUTHORS   Kahmann,R.
  TITLE     Methylation regulates the expression of a DNA-modification function
            encoded by bacteriophage Mu
  JOURNAL   Cold Spring Harb Symp Quant Biol 47 Pt 2, 639-646 (1983)
   PUBMED   6345072
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021626.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10122.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..43
                     /organism="Wohlfahrtiimonas chitiniclastica"
                     /db_xref="taxon:400946"
     Protein         1..43
                     /product="Com family DNA-binding transcriptional
                     regulator"
                     /calculated_mol_wt=4927
     Region          8..>42
                     /region_name="Mu-like_Com"
                     /note="Mu-like prophage protein Com; cl11540"
                     /db_xref="CDD:472211"
ORIGIN      
        1 merkkkvlte vrcancnkkl cdaeynvlki kcprcksmnv lkk
//
LOCUS       WP_258089347             229 aa            linear   BCT 02-MAR-2025
DEFINITION  triose-phosphate isomerase [Weissella fangxianensis].
ACCESSION   WP_258089347
VERSION     WP_258089347.1
KEYWORDS    RefSeq.
SOURCE      Weissella fangxianensis
  ORGANISM  Weissella fangxianensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Jogl,G., Rozovsky,S., McDermott,A.E. and Tong,L.
  TITLE     Optimal alignment for enzymatic proton transfer: structure of the
            Michaelis complex of triosephosphate isomerase at 1.2-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 100 (1), 50-55 (2003)
   PUBMED   12509510
REFERENCE   2  (residues 1 to 229)
  AUTHORS   Nagano,N., Orengo,C.A. and Thornton,J.M.
  TITLE     One fold with many functions: the evolutionary relationships
            between TIM barrel families based on their sequences, structures
            and functions
  JOURNAL   J Mol Biol 321 (5), 741-765 (2002)
   PUBMED   12206759
REFERENCE   3  (residues 1 to 229)
  AUTHORS   Olah,J., Orosz,F., Keseru,G.M., Kovari,Z., Kovacs,J., Hollan,S. and
            Ovadi,J.
  TITLE     Triosephosphate isomerase deficiency: a neurodegenerative
            misfolding disease
  JOURNAL   Biochem Soc Trans 30 (2), 30-38 (2002)
   PUBMED   12023819
REFERENCE   4  (residues 1 to 229)
  AUTHORS   Knowles,J.R.
  TITLE     Enzyme catalysis: not different, just better
  JOURNAL   Nature 350 (6314), 121-124 (1991)
   PUBMED   2005961
REFERENCE   5  (residues 1 to 229)
  AUTHORS   Lolis,E., Alber,T., Davenport,R.C., Rose,D., Hartman,F.C. and
            Petsko,G.A.
  TITLE     Structure of yeast triosephosphate isomerase at 1.9-A resolution
  JOURNAL   Biochemistry 29 (28), 6609-6618 (1990)
   PUBMED   2204417
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012349.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00121.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Weissella fangxianensis"
                     /db_xref="taxon:2953879"
     Protein         1..229
                     /product="triose-phosphate isomerase"
                     /GO_function="GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=25567
     Region          1..208
                     /region_name="TIM"
                     /note="Triosephosphate isomerase; pfam00121"
                     /db_xref="CDD:459680"
ORIGIN      
        1 mlavlnfknl vdfeqqkqfl adlsqttvdv dlkiaptlpv pntydnfevv sqnltikqrt
       61 vgeispsvlq slgittsfig hlerrkslne gllivrkrle nalenditpi lsvgqysnie
      121 mvveelgill kdepinkpii iayeslaste mgralyside irdihdairk fmknnypeis
      181 yqlilgghmd eagspianai gydgvligdr yhtlndfqpv ldvlnklsr
//
LOCUS       WP_258091260             295 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein
            [Wohlfahrtiimonas chitiniclastica].
ACCESSION   WP_258091260
VERSION     WP_258091260.1
KEYWORDS    RefSeq.
SOURCE      Wohlfahrtiimonas chitiniclastica
  ORGANISM  Wohlfahrtiimonas chitiniclastica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cardiobacteriales; Ignatzschineriaceae; Wohlfahrtiimonas.
REFERENCE   1  (residues 1 to 295)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Wohlfahrtiimonas chitiniclastica"
                     /db_xref="taxon:400946"
     Protein         1..295
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=32532
     Region          4..287
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(9,11..12,14,33..35,64..66,104..106,129,133,155..158)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(82,106,129,133)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mnetilltga sgflgrriar flqrtdayli ttsrqqesyp nhlvrdlanv taeiaqnvdt
       61 vihfaglnet anatdadyht anvehsvkll esamaagarr fifisttkvh gesgmditen
      121 spfapataya rsklaaemal qqaakdridl vilrlpliyh idainefghy iamvkegrsl
      181 pfdkmdnqrt mlalcnfesa lnavlmqpek gsdtfiiadg falstteifk giavsaevpl
      241 qlfylpkima kasmkltgra rsfdelwgsy vvnsqyaqtt lnwqpardyv anlsn
//
LOCUS       WP_258091305             360 aa            linear   BCT 02-MAR-2025
DEFINITION  GTPase [Wohlfahrtiimonas chitiniclastica].
ACCESSION   WP_258091305
VERSION     WP_258091305.1
KEYWORDS    RefSeq.
SOURCE      Wohlfahrtiimonas chitiniclastica
  ORGANISM  Wohlfahrtiimonas chitiniclastica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cardiobacteriales; Ignatzschineriaceae; Wohlfahrtiimonas.
REFERENCE   1  (residues 1 to 360)
  AUTHORS   Shields,M.J., Fischer,J.J. and Wieden,H.J.
  TITLE     Toward understanding the function of the universally conserved
            GTPase HflX from Escherichia coli: a kinetic approach
  JOURNAL   Biochemistry 48 (45), 10793-10802 (2009)
   PUBMED   19824612
REFERENCE   2  (residues 1 to 360)
  AUTHORS   Dutta,D., Bandyopadhyay,K., Datta,A.B., Sardesai,A.A. and
            Parrack,P.
  TITLE     Properties of HflX, an enigmatic protein from Escherichia coli
  JOURNAL   J Bacteriol 191 (7), 2307-2314 (2009)
   PUBMED   19181811
REFERENCE   3  (residues 1 to 360)
  AUTHORS   Jain,N., Dhimole,N., Khan,A.R., De,D., Tomar,S.K., Sajish,M.,
            Dutta,D., Parrack,P. and Prakash,B.
  TITLE     E. coli HflX interacts with 50S ribosomal subunits in presence of
            nucleotides
  JOURNAL   Biochem Biophys Res Commun 379 (2), 201-205 (2009)
   PUBMED   19109926
REFERENCE   4  (residues 1 to 360)
  AUTHORS   Bassler,J., Kallas,M. and Hurt,E.
  TITLE     The NUG1 GTPase reveals and N-terminal RNA-binding domain that is
            essential for association with 60 S pre-ribosomal particles
  JOURNAL   J Biol Chem 281 (34), 24737-24744 (2006)
   PUBMED   16803892
REFERENCE   5  (residues 1 to 360)
  AUTHORS   Vernet,C., Ribouchon,M.T., Chimini,G. and Pontarotti,P.
  TITLE     Structure and evolution of a member of a new subfamily of
            GTP-binding proteins mapping to the human MHC class I region
  JOURNAL   Mamm Genome 5 (2), 100-105 (1994)
   PUBMED   8180467
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014036.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01926.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Wohlfahrtiimonas chitiniclastica"
                     /db_xref="taxon:400946"
     Protein         1..360
                     /product="GTPase"
                     /GO_function="GO:0005525 - GTP binding [Evidence IEA]"
                     /calculated_mol_wt=40578
     Region          7..>215
                     /region_name="YeeP"
                     /note="Predicted GTPase [General function prediction
                     only]; COG3596"
                     /db_xref="CDD:442815"
ORIGIN      
        1 mtetnyniai igqtgvgkss linylfgdnv aktgvgkpvt tngfheikhf ikdmpvniyd
       61 swglevgked ewqndldeel kkrgidkpas ewfhsvfyci saasarlqdv dcaiirklis
      121 knykvsvvlt kadtlseede iefikviaee lgkdiaiipi cseqkktrag eilpfgkekv
      181 enqslvdlid slvlripkhc eqimldelqd wqreqkikie dkmsffsmas pseiqkelsn
      241 sskeivrvis dkggkakkna lnqyafianh lgdqefqsli gksisdnykt gfsfyvlaln
      301 lisiliplif slwnkkqqte amcesvddfv sqlteiiqkd tkelakslnv ikqqvtenll
//
LOCUS       WP_258091386            1023 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin dinucleotide binding domain-containing protein
            [Salipiger pentaromativorans].
ACCESSION   WP_258091386
VERSION     WP_258091386.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 1023)
  AUTHORS   Hochheimer,A., Hedderich,R. and Thauer,R.K.
  TITLE     The formylmethanofuran dehydrogenase isoenzymes in Methanobacterium
            wolfei and Methanobacterium thermoautotrophicum: induction of the
            molybdenum isoenzyme by molybdate and constitutive synthesis of the
            tungsten isoenzyme
  JOURNAL   Arch Microbiol 170 (5), 389-393 (1998)
   PUBMED   9818358
REFERENCE   2  (residues 1 to 1023)
  AUTHORS   Schneider,F., Lowe,J., Huber,R., Schindelin,H., Kisker,C. and
            Knablein,J.
  TITLE     Crystal structure of dimethyl sulfoxide reductase from Rhodobacter
            capsulatus at 1.88 A resolution
  JOURNAL   J Mol Biol 263 (1), 53-69 (1996)
   PUBMED   8890912
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013717.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01568.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..1023
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_function="GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /calculated_mol_wt=108540
     Region          1..1022
                     /region_name="PRK14991"
                     /note="tetrathionate reductase subunit TtrA"
                     /db_xref="CDD:237883"
ORIGIN      
        1 mstrrnilkg aaatgalatf gvgyadtlkk lakghwsger pdkalagnap dpeysidpet
       61 gdlalnpdqa lsytmcigct tmcgvrvrvd ktrnevlrva gnpyspmstd pfipyetsvr
      121 dsframaqtg agqgltnrst acgrgnavlq qvtnprrvlk pmkrvgprgs gewqtisfeq
      181 lveevveggd lfgegrvagl reicdletpa vegapeygpr anrlvlmncv ddgrdnlvlr
      241 wlkqsfgsnn ftrhgaycgg ayrsgsgalf gdvkamphak pdfseaefii fagtapgnag
      301 npfkrvgalv aqarasgkls yvvvdpvlnn aqnapsgdra rwlpikpgtd galamgmmrw
      361 mfendrinaa ylaqpsqaaa daageanwtn athlvvveeg hkrfgrmlrg sdmglavage
      421 pytdadpymv asdsgpvpag asaaplffdg vagtaggpva vktaltllre eamaqslday
      481 aqdcgipaet iaglarefts hgrkaavnsh ggmmngsgfy nawaltmlnt lignlnwkgg
      541 tmiagggfpe nkgpaydlas fpgavtargl pygrnapyek taefkakqaa gkpypadgpw
      601 ypqapglate wisslvngyp yhaealifrn tnpvygipgi ahvmdklkdp avvplilsvd
      661 pfinessaia dyivpdsvmy etwgftkpwg gvatkattar wpvieprmaq naegervgle
      721 sfliatakrm glpgfgdaai pdaegnlhpl nraedwylrg aanvaligtp vddasdddie
      781 lsgvsrirad leavlkpgew rkaatiyakg gryeniersy tgerathafa apmqiwnegv
      841 gsfrrastgk rmpgtacwra pefadgtkva ehypeadwpv klvsfksplq nsysvgakal
      901 lrivaanpvm igrdvaeprg iatgdmvrlt tpggqldsva vvrdglapgt vaiehgfghr
      961 gfgaeditid ghttpadprl aagvllndlg mmdptrgkag vwvdpvsgta vrqglparve
     1021 rig
//
LOCUS       WP_258091494             444 aa            linear   BCT 02-MAR-2025
DEFINITION  M48 family metalloprotease [Salipiger pentaromativorans].
ACCESSION   WP_258091494
VERSION     WP_258091494.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 444)
  AUTHORS   Quigley,A., Dong,Y.Y., Pike,A.C., Dong,L., Shrestha,L.,
            Berridge,G., Stansfeld,P.J., Sansom,M.S., Edwards,A.M., Bountra,C.,
            von Delft,F., Bullock,A.N., Burgess-Brown,N.A. and Carpenter,E.P.
  TITLE     The structural basis of ZMPSTE24-dependent laminopathies
  JOURNAL   Science 339 (6127), 1604-1607 (2013)
   PUBMED   23539603
REFERENCE   2  (residues 1 to 444)
  AUTHORS   Pryor,E.E. Jr., Horanyi,P.S., Clark,K.M., Fedoriw,N.,
            Connelly,S.M., Koszelak-Rosenblum,M., Zhu,G., Malkowski,M.G.,
            Wiener,M.C. and Dumont,M.E.
  TITLE     Structure of the integral membrane protein CAAX protease Ste24p
  JOURNAL   Science 339 (6127), 1600-1604 (2013)
   PUBMED   23539602
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013594.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01435.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..444
                     /product="M48 family metalloprotease"
                     /EC_number="3.4.24.-"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=47510
     Region          41..223
                     /region_name="M48C_Oma1-like"
                     /note="Oma1 peptidase-like, integral membrane
                     metallopeptidase; cd07324"
                     /db_xref="CDD:320683"
     Site            order(99..100,103,166,170,212)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:320683"
     Site            order(99,103,166,212)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:320683"
     Region          273..408
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          273..299
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(275..276,279..280,282,306,309..310,313..314,
                     316..317,340,343..344,347..348,351)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          304..334
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          339..365
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mstaarplav lliaatlllv amparavsll rdadieyalg elaapvlraa glspsqvqvl
       61 vvhdsslnaf iadtqhifih sglimkldsa aalqaviahe aahitnghit rrlgnmrsar
      121 tasalgmlla aatgaatgng damagvllgt qsaamrnfla htraeessad ltsirtlira
      181 gidpqgaldv qelfrgqeal sssrqdpyml thpltrdrlr alkglvaaag dkarddpead
      241 ywfartrakl saflrapnwt lrrldrapsr dialmseava rhrqsdltra lksidgaial
      301 rprdpflhdl kgqillesrk agpavqvydq arrlaprnaq ilgglgraql aagqysaalr
      361 tleeargrdw rdsrvlrdla vayaktgnpg maseataqry alegrpkdag ihakralgll
      421 prgsapwrra qdvldaaera akar
//
LOCUS       WP_258091165             177 aa            linear   BCT 02-MAR-2025
DEFINITION  UPF0149 family protein [Wohlfahrtiimonas chitiniclastica].
ACCESSION   WP_258091165
VERSION     WP_258091165.1
KEYWORDS    RefSeq.
SOURCE      Wohlfahrtiimonas chitiniclastica
  ORGANISM  Wohlfahrtiimonas chitiniclastica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cardiobacteriales; Ignatzschineriaceae; Wohlfahrtiimonas.
REFERENCE   1  (residues 1 to 177)
  AUTHORS   Galkin,A., Sarikaya,E., Lehmann,C., Howard,A. and Herzberg,O.
  TITLE     X-ray structure of HI0817 from Haemophilus influenzae: protein of
            unknown function with a novel fold
  JOURNAL   Proteins 57 (4), 874-877 (2004)
   PUBMED   15317022
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015642.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03695.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Wohlfahrtiimonas chitiniclastica"
                     /db_xref="taxon:400946"
     Protein         1..177
                     /product="UPF0149 family protein"
                     /calculated_mol_wt=20019
     Region          4..176
                     /region_name="YgfB"
                     /note="Uncharacterized conserved protein YgfB, UPF0149
                     family [Function unknown]; COG3079"
                     /db_xref="CDD:442313"
ORIGIN      
        1 msanqdvlyk eyqevlagln pseaqgilia yicahpneav llwikelsrl tndgikegdl
       61 lvqlyketvq slndlnftft pllpedadiy qkiaalqqcg eglvygigmn hfklegdaye
      121 fmndliefth adfepedeid deateqdfee ilefvrmgil liyheilqtt eakkpka
//
LOCUS       WP_258091536             274 aa            linear   BCT 02-MAR-2025
DEFINITION  transglycosylase SLT domain-containing protein [Salipiger
            pentaromativorans].
ACCESSION   WP_258091536
VERSION     WP_258091536.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 274)
  AUTHORS   Koraimann,G.
  TITLE     Lytic transglycosylases in macromolecular transport systems of
            Gram-negative bacteria
  JOURNAL   Cell Mol Life Sci 60 (11), 2371-2388 (2003)
   PUBMED   14625683
REFERENCE   2  (residues 1 to 274)
  AUTHORS   Mushegian,A.R., Fullner,K.J., Koonin,E.V. and Nester,E.W.
  TITLE     A family of lysozyme-like virulence factors in bacterial pathogens
            of plants and animals
  JOURNAL   Proc Natl Acad Sci U S A 93 (14), 7321-7326 (1996)
   PUBMED   8692991
REFERENCE   3  (residues 1 to 274)
  AUTHORS   Thunnissen,A.M., Rozeboom,H.J., Kalk,K.H. and Dijkstra,B.W.
  TITLE     Structure of the 70-kDa soluble lytic transglycosylase complexed
            with bulgecin A. Implications for the enzymatic mechanism
  JOURNAL   Biochemistry 34 (39), 12729-12737 (1995)
   PUBMED   7548026
REFERENCE   4  (residues 1 to 274)
  AUTHORS   Koonin,E.V. and Rudd,K.E.
  TITLE     A conserved domain in putative bacterial and bacteriophage
            transglycosylases
  JOURNAL   Trends Biochem Sci 19 (3), 106-107 (1994)
   PUBMED   8203016
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013618.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01464.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..274
                     /product="transglycosylase SLT domain-containing protein"
                     /calculated_mol_wt=29356
ORIGIN      
        1 msilalllsa tvawsdpvpl pptqsvravy eslrpqarrm aipearwgsd ggrkswslav
       61 ltalrshash lpetvpddia twcpaypsag radreafwlg lvsalakhes tyrptavggg
      121 glwygllqil pstarlygce arsgaalkdp rlnlscglri maktvardgv vsrnmrgvaa
      181 dwgpfhsskk rqdmiawtra qpycaglprs lrpiarpdaw gqpalmatag qtrpqvpatd
      241 gvvartvdgt vlrkgdgiia tsgmtseqkl lrar
//
LOCUS       WP_258091568             984 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein [Salipiger pentaromativorans].
ACCESSION   WP_258091568
VERSION     WP_258091568.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..984
                     /product="helicase-related protein"
                     /calculated_mol_wt=108728
     Region          11..>113
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(14..20,94)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          160..280
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            261
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350171"
     Region          <785..867
                     /region_name="rne"
                     /note="ribonuclease E; Reviewed; PRK10811"
                     /db_xref="CDD:236766"
ORIGIN      
        1 mpqrarvaav lgptntgkth yaiermlahr tgmiglplrl larevydkvv aargpsvval
       61 vtgeerivpp raaywvctve ampeglgcdf vaideiqlca dperghvftd rllrmrgqhe
      121 tlflgadtmr gpiaalvkgc efmrrermsq lsyigskkis rmpprsaivg fsvdnvyaia
      181 elirrtkgga avvmgalspr trnaqvdlyq ngevdylvat daigmglnld idhvafsslt
      241 kfdgrrmral qpnelaqiag ragrgmrpgt fgttgdagqi pedwveaicn htftplrkln
      301 wrnanlrfgt vqtlieslee apqddwltka readdlmvlk slsreaevma rassptsvql
      361 lwdvcripdf rgishaehag llqvifqhlh ergaiprdfm arqvkridrt dgdidtlskr
      421 layirtwtyv aqrrgwvdde shwreatrav edalsdalhe rltqrfvdrr tsvllrrlkq
      481 keallaevnd kgevtvegef vgrlegfrfr qdqgatgqea ktlkqaslqa laphfhlrad
      541 rfynapdtei dfteqgglmw gdqavgklvk gddalkprvv gfvddtagpd viqkverrlq
      601 hfidrkiaal feplltlqrd etltglargf afrmveamgi lprqlvtdev kqldqearga
      661 lrkhgmrfgq ytifmplllk paptrlrlvl wslfsdldtf peapppglvt vpnirdipmq
      721 hytlsgyrpa gerairidml erladllraq dsrggfeanp dmlsitgmtl eqfadlmqgl
      781 gykaekgere kvrsadevvt etsdpsgepg etepvmdaaq eeentpaama dpsatpeaad
      841 vvagsegydd egvapiaetp eaveiddnip evddtdllpg sapdealagp etemfftftw
      901 gggnrnrgpr rearegregq ghrgaprgnk gggapkgkgg kkpgkgkpqg qkgpktyesr
      961 prkedkidpd npfaaalmgf kgks
//
LOCUS       WP_258091781             649 aa            linear   BCT 02-MAR-2025
DEFINITION  transglycosylase SLT domain-containing protein [Salipiger
            pentaromativorans].
ACCESSION   WP_258091781
VERSION     WP_258091781.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 649)
  AUTHORS   Koraimann,G.
  TITLE     Lytic transglycosylases in macromolecular transport systems of
            Gram-negative bacteria
  JOURNAL   Cell Mol Life Sci 60 (11), 2371-2388 (2003)
   PUBMED   14625683
REFERENCE   2  (residues 1 to 649)
  AUTHORS   Mushegian,A.R., Fullner,K.J., Koonin,E.V. and Nester,E.W.
  TITLE     A family of lysozyme-like virulence factors in bacterial pathogens
            of plants and animals
  JOURNAL   Proc Natl Acad Sci U S A 93 (14), 7321-7326 (1996)
   PUBMED   8692991
REFERENCE   3  (residues 1 to 649)
  AUTHORS   Thunnissen,A.M., Rozeboom,H.J., Kalk,K.H. and Dijkstra,B.W.
  TITLE     Structure of the 70-kDa soluble lytic transglycosylase complexed
            with bulgecin A. Implications for the enzymatic mechanism
  JOURNAL   Biochemistry 34 (39), 12729-12737 (1995)
   PUBMED   7548026
REFERENCE   4  (residues 1 to 649)
  AUTHORS   Koonin,E.V. and Rudd,K.E.
  TITLE     A conserved domain in putative bacterial and bacteriophage
            transglycosylases
  JOURNAL   Trends Biochem Sci 19 (3), 106-107 (1994)
   PUBMED   8203016
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013618.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01464.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..649
                     /product="transglycosylase SLT domain-containing protein"
                     /calculated_mol_wt=71567
     Region          26..>85
                     /region_name="BamD"
                     /note="BamD lipoprotein, a component of the beta-barrel
                     assembly machinery; cd15830"
                     /db_xref="CDD:276939"
     Region          49..76
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276939"
     Region          471..626
                     /region_name="Slt70-like"
                     /note="70kDa soluble lytic transglycosylase (Slt70) and
                     similar proteins; cd13401"
                     /db_xref="CDD:381604"
     Site            order(500,509,511,513,518..520,523,554,573..577,608)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:381604"
ORIGIN      
        1 msrlwallll ivtsfpaqaq qdrplaqamt amrqgnwaaa lidsrgdgqa aldvilwhyl
       61 rasrgdaaqi mdflkrnpdw pgmpylreks eiaisesgdn divraffegy rpqtgagala
      121 laraylaege rgaaeaevvm awrtlplsse erqtflsdwg tllkphhear ldmalwkgwe
      181 snaramiplv gedwqklaea rialrdmeag vdvrieavpd rlknhpglay erylwrvrkg
      241 rdadaialll ehsksaetlg epwawagrrd dlahelmleg kyrdayrvas thhlvegsdy
      301 aglewlsgyi alrflddpqt alghfrghgg avdtpislgr agywtgrale algddagard
      361 ayrqgarwqt sfygllaaer agvpadpala gteafpdwrq apftqssvyk aavlllasge
      421 vslgerflth laegldrqqi gqlgvmlael grphvqvmlg kraarfgiel pgpyyalhpd
      481 ivktefpvpk elvlaiarre sefdpdvvsg agarglmqlm pgtakevsgw ldvayshdgl
      541 tedpaynarl gseylaslar rfdgnavmma agynagpsrp irwmeqfgdp rkgeidvvdw
      601 iemipfnetr nyvmrvvesl pvyrarlggn plpvpfsael vgstllpsd
//
LOCUS       WP_258091871             128 aa            linear   BCT 02-MAR-2025
DEFINITION  biopolymer transporter ExbD [Salipiger pentaromativorans].
ACCESSION   WP_258091871
VERSION     WP_258091871.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 128)
  AUTHORS   Wiggerich,H.G., Klauke,B., Koplin,R., Priefer,U.B. and Puhler,A.
  TITLE     Unusual structure of the tonB-exb DNA region of Xanthomonas
            campestris pv. campestris: tonB, exbB, and exbD1 are essential for
            ferric iron uptake, but exbD2 is not
  JOURNAL   J Bacteriol 179 (22), 7103-7110 (1997)
   PUBMED   9371459
REFERENCE   2  (residues 1 to 128)
  AUTHORS   Sun,T.P. and Webster,R.E.
  TITLE     Nucleotide sequence of a gene cluster involved in entry of E
            colicins and single-stranded DNA of infecting filamentous
            bacteriophages into Escherichia coli
  JOURNAL   J Bacteriol 169 (6), 2667-2674 (1987)
   PUBMED   3294803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014525.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02472.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..128
                     /product="biopolymer transporter ExbD"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=13380
ORIGIN      
        1 mrsakrrrrl smtslidvif llllffmlts tftrfsevel aaagsgaapa pserplflql
       61 gpetarlnsa evaleglada laaqrgdgaa vrrllvalqp gvsaqrltdl lvvlrglpgl
      121 apvvlgas
//
LOCUS       WP_258091470             391 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent monooxygenase [Salipiger pentaromativorans].
ACCESSION   WP_258091470
VERSION     WP_258091470.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 391)
  AUTHORS   Schreuder,H.A., van der Laan,J.M., Swarte,M.B., Kalk,K.H., Hol,W.G.
            and Drenth,J.
  TITLE     Crystal structure of the reduced form of p-hydroxybenzoate
            hydroxylase refined at 2.3 A resolution
  JOURNAL   Proteins 14 (2), 178-190 (1992)
   PUBMED   1409567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01494.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..391
                     /product="FAD-dependent monooxygenase"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /calculated_mol_wt=41701
     Region          18..314
                     /region_name="PRK08163"
                     /note="3-hydroxybenzoate 6-monooxygenase"
                     /db_xref="CDD:181262"
ORIGIN      
        1 maltgreivv agggigglaa alalrqrgae vrvleraeai tevgagiqvs pnglrvieal
       61 glgaalrars crgravvlrd hragaqvlrl dlgrlpagqe yyfvhradli gmladaaraa
      121 gvkirllqrv eavtpgarpe ldlgngdras gdlivgadgl hsvlrqalng vvapffahqv
      181 awravvpnvf ghppeaqvhm gpgrhmvsyp lrdgtivniv aaeerrgwve egwshedape
      241 nlraafaafg gevpkmlaav drvglwglfr hpvarhwhap gvallgdaah ptlpfmaqga
      301 nmaledawvl aaslaeepdq dralaryqar rrarcekvva aangnawkyh lrnpllrgaa
      361 hlglglagrl apermmgqfd wiyghdvtaq a
//
LOCUS       WP_258091988             254 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Salipiger pentaromativorans].
ACCESSION   WP_258091988
VERSION     WP_258091988.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 254)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..254
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=27855
     Region          10..248
                     /region_name="PRK10673"
                     /note="esterase"
                     /db_xref="CDD:182637"
ORIGIN      
        1 mlntilhgtp gaeppllivh glygsarnwg viakrlsder qviavdqrnh gdsawsdshs
       61 ypdmagdlae vieahggrad vlghsmggka amllaltrpe lvnrlivadi apvayshsqi
      121 qyieamravd ldrvekrsda sdqlarsvsd palrafftqs ldlrekrwkl nldvlaaemp
      181 kilsfpeieg vfegltlfls gaesdyvlpe yrerirtlfp aarfakipga ghwlhaekpr
      241 efeaavracl aarg
//
LOCUS       WP_258092025             382 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Salipiger pentaromativorans].
ACCESSION   WP_258092025
VERSION     WP_258092025.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..382
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=37871
     Region          11..368
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(20..21,24..25,28,60,109..110,112..114,117,136,
                     139..140,143,209,212..213,216..218,221,249,253,302..303,
                     307,311,328,331..332,335..336,339)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mtilkdlaas rgpaaafaam glfwggfaal vpdlkpqarl sdegfgmaml vatcgavlam
       61 wlapraearl graalpvlal vmaaafplpg laqswtgfal amamaaagsg lldvvmnarv
      121 aaleaalgrp lmnlnhglys lvyaaaavat glaretgaap lpvfsglalv avllagimlt
      181 apvatdgaee tkagalprwg lilpggtivl igflaeqsae gwsalhlern lgagaaagav
      241 gpallgltmg vgrlagqala qrfaeptvir agalvaacga alagfapglw aayagfavlg
      301 lgasvvvpma fafvagrvga erraqaisrl svigyagffl gppmmgglsg lmglatafga
      361 valilaaipa ilvpwmkrga ae
//
LOCUS       WP_258092081             347 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Salipiger pentaromativorans].
ACCESSION   WP_258092081
VERSION     WP_258092081.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 347)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 347)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 347)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 347)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..347
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=37395
     Region          25..293
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mtikkgitag ciaaltsgaa waegtinvlt wegyadpsfi tpfeetsgck vnatyvgsnd
       61 dfapklmagg gvydlitpsi dttqlmidlg fvepldtaai tgwdgiypkf laqdgiqqdg
      121 ayygmpyswg aiafmyldsa fdtppsslda lwsedlagki slwddksaiy vaarkngdmd
      181 iynltddqia aaqdsllaqk plvrkywata gelvdlykag evvisntwag yqssllaaeg
      241 vavtefipee gaegwmdswm vvkdtpnkdc aykflnmqls elgqcgvanv ngysaanasa
      301 akacmtaeqy salhqddpdy ldslliwtpl gdrfetytna wnavkaq
//
LOCUS       WP_258092083             391 aa            linear   BCT 02-MAR-2025
DEFINITION  PAS domain-containing protein [Salipiger pentaromativorans].
ACCESSION   WP_258092083
VERSION     WP_258092083.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024818.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13426.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..391
                     /product="PAS domain-containing protein"
                     /calculated_mol_wt=42821
     Region          262..>374
                     /region_name="NtrB"
                     /note="Signal transduction histidine kinase NtrB, nitrogen
                     specific [Signal transduction mechanisms]; COG3852"
                     /db_xref="CDD:443061"
ORIGIN      
        1 msvrttdqte mtdiltregr vaqicaaqea vlgtapgala gadwsriyrl parerleelf
       61 gqpdagphlv alemrrddgt llpvtavvtr ishpdhgicl rtvkwrssgm lenaaslaee
      121 nevissilaa sddagwcmew aepvdlsape qeiirqvfen gprwrfcnda marlyrtpeg
      181 adfnalpvhe tfprspenee fvhrlvqanf dvngspsrdl rydgvwieve ndvrghirgn
      241 rlyrmwgtvr dvskharraa vlreeietle ailaalpdav lvvdgeghll ranlaaeelf
      301 dlspdllpgr sltdlvdlpm alsalfataa erlpghpvst iavglrtpsq sfradlaarp
      361 lslrgteclv lslrarlgis gtgapplrar g
//
LOCUS       WP_258092089             411 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Salipiger pentaromativorans].
ACCESSION   WP_258092089
VERSION     WP_258092089.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 411)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..411
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=43461
     Region          29..399
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mtrniariva hpafaqaqet lraqhdrlve eiialteipa ppfhearraa afrerlaaqg
       61 leevrtdaig nvtglrrgrg ngqmvvlaah ldtvfpegtd vtvrregtrl yapgigddtr
      121 glavllafar aldaagiete qdllfvadvg eegkgdlrgi rhlliegryr drigafftld
      181 spevepvvir avgshryrit frgpgghsyg afgtvnpahv madvvagmar wrvpseprtt
      241 ycasvfgggs ainaipeevw teidlrsvcq eelnrldsdl hmliaaavea enargdtshg
      301 eitveaarlg arpaggtdps apivracdaa laafgftmrp etgstdanip mslgipavki
      361 gtggcggrah tlgewidvap epslrglyag laailgvagl hpdtettata p
//
LOCUS       WP_258092090             377 aa            linear   BCT 02-MAR-2025
DEFINITION  alanine racemase [Salipiger pentaromativorans].
ACCESSION   WP_258092090
VERSION     WP_258092090.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 377)
  AUTHORS   Shaw,J.P., Petsko,G.A. and Ringe,D.
  TITLE     Determination of the structure of alanine racemase from Bacillus
            stearothermophilus at 1.9-A resolution
  JOURNAL   Biochemistry 36 (6), 1329-1342 (1997)
   PUBMED   9063881
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013345.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01168.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..377
                     /product="alanine racemase"
                     /EC_number="5.1.1.1"
                     /calculated_mol_wt=39052
     Region          4..377
                     /region_name="PLPDE_III"
                     /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
                     Enzymes; cl00261"
                     /db_xref="CDD:469695"
     Site            order(40,42,83,133,168,170,232..235)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate (PLP) binding site [chemical
                     binding]"
                     /db_xref="CDD:143484"
     Site            42
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:143484"
ORIGIN      
        1 mpnlsdrdtp flaldrdrmd rnvarmrdra ealgvtlrph lktvksvpaa qrilgdmaap
       61 atvstlqeae afaeagcrdl iyavgiapak lprvlamrqa gtdlavildn aaqaeavcaa
      121 sraadapipa lieidsdgmr aglapddpri valgrrlveg gaelrgvlth ggasygrftd
      181 adrramaaqe rdaavaaata lraaglacpv vsvgstpsaa fatdltgvte lragvytlsd
      241 lmmaglgvgg iddialsvva tvighqearg wiltdagfma lsrdrgtagm pvdqgfglva
      301 dldgvpfgdl ivqgtsqehg ilamrpgssa plpdlpvgtr lriypnhaca tvgmhpafav
      361 teggqeivdd wpilrgw
//
LOCUS       WP_258092118             265 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Salipiger
            pentaromativorans].
ACCESSION   WP_258092118
VERSION     WP_258092118.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 265)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 265)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 265)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 265)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..265
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=29174
     Region          13..265
                     /region_name="PhnK"
                     /note="ABC-type phosphonate transport system, ATPase
                     component PhnK [Inorganic ion transport and metabolism];
                     COG4107"
                     /db_xref="CDD:443283"
ORIGIN      
        1 mtllreaprl vqaqpllrme rvhkrygdvv aledvsaevy pgevlgivge sgsgkstllr
       61 mmnledlpda ghyrldlpgv pedlftldgy arrmlrahhi givyqnphlg llmknsssgn
      121 vaerlliage rrfavlrdka rdalaasefp ldrmdappve lsggmqqrvq lakaialepa
      181 vllldepttg ldvsvqalvl dtlkrlqrer ritmvivshd lgvirtmadr vivmrrglvv
      241 eaglvdqvfq dpqaaytqal vhakl
//
LOCUS       WP_258092095             241 aa            linear   BCT 02-MAR-2025
DEFINITION  AroM family protein [Salipiger pentaromativorans].
ACCESSION   WP_258092095
VERSION     WP_258092095.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 241)
  AUTHORS   DeFeyter,R.C., Davidson,B.E. and Pittard,J.
  TITLE     Nucleotide sequence of the transcription unit containing the aroL
            and aroM genes from Escherichia coli K-12
  JOURNAL   J Bacteriol 165 (1), 233-239 (1986)
   PUBMED   3001025
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018952.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07302.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..241
                     /product="AroM family protein"
                     /calculated_mol_wt=24777
     Region          19..241
                     /region_name="Asp_Glu_race"
                     /note="Asp/Glu/Hydantoin racemase; cl00518"
                     /db_xref="CDD:444951"
ORIGIN      
        1 mldrtpkpas apetaplgrk lgtitpgqap radltpilea alpegvaliq kgvldglsae
       61 eiaagfapap gapviisrll dgasavmdkh kveaniqrlv teledagctt illlctgkfe
      121 alhtrsarlv epqkvllpsl aaltqglrvg llvplpeqid seggkfaafd tppiaaavsp
      181 yepandalae taralaeaga eilmtdcmgf vehhrdtara asglpvvlss aliaklvaei
      241 v
//
LOCUS       WP_258092186             218 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Salipiger pentaromativorans].
ACCESSION   WP_258092186
VERSION     WP_258092186.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021492.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09976.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..218
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=22710
     Region          1..218
                     /region_name="TPR1"
                     /note="TPR-like repeat domain [Function unknown]; COG4649"
                     /db_xref="CDD:443687"
ORIGIN      
        1 msdtdsfide vteevrrdrl falmkrygwl avllvlvlvg gaawreyaaa rdraaaealg
       61 dailsaldad dpaarsaala avdaptpgaq avvamlaate aaragdadta aqslesvaan
      121 gdlpeiyrei asfkalsrpd tglspedrri glealavpgk plrllaeeql alieieagar
      181 eaaidrlrri iedseatagl rqratqliva lggapeag
//
LOCUS       WP_258092096             321 aa            linear   BCT 02-MAR-2025
DEFINITION  AroM family protein [Salipiger pentaromativorans].
ACCESSION   WP_258092096
VERSION     WP_258092096.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 321)
  AUTHORS   DeFeyter,R.C., Davidson,B.E. and Pittard,J.
  TITLE     Nucleotide sequence of the transcription unit containing the aroL
            and aroM genes from Escherichia coli K-12
  JOURNAL   J Bacteriol 165 (1), 233-239 (1986)
   PUBMED   3001025
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018952.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07302.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..321
                     /product="AroM family protein"
                     /calculated_mol_wt=35090
     Region          23..235
                     /region_name="Asp_Glu_race"
                     /note="Asp/Glu/Hydantoin racemase; cl00518"
                     /db_xref="CDD:444951"
     Region          <218..314
                     /region_name="FixJ"
                     /note="DNA-binding response regulator, FixJ family,
                     consists of REC and HTH domains [Signal transduction
                     mechanisms, Transcription]; COG4566"
                     /db_xref="CDD:443623"
ORIGIN      
        1 mnldkahrsv faqdrpalpr vlfltvgrsp rqdilpeiln ildidldvve lgvlddlsag
       61 eieeilahdg eeslstylse nirvvlskaa vrrklerild eiqpydcdlv vllstgllrd
      121 fqsprpmvna qravesaiia lgsndqtigl ihplerqvge idipvlnqfn vtasharegd
      181 rdslaravmd vadsdvivlh svsyteadre ivaqasrkpv llarriiata irlmlqqapl
      241 rsgpalsaet rrrlerltpr erqvatlvce glpnkviaaq lgisqktvev hranvmsktg
      301 asslgglihm mlgitpstls i
//
LOCUS       WP_258092303             572 aa            linear   BCT 02-MAR-2025
DEFINITION  CoA-binding protein [Salipiger pentaromativorans].
ACCESSION   WP_258092303
VERSION     WP_258092303.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024773.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13380.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..572
                     /product="CoA-binding protein"
                     /calculated_mol_wt=58451
     Region          2..>354
                     /region_name="PatZN"
                     /note="Acyl-CoA synthetase (NDP forming) [Energy
                     production and conversion]; COG1042"
                     /db_xref="CDD:440664"
ORIGIN      
        1 mtrdfsrlfk prsialigaa awcsgvianl ramgfvwdiw pvvpgesavd gvrafesier
       61 lpappdvgfv cldgaeavta vaalarrgag aalcqgmadp aalaeaagrm lllgpgchgf
      121 vsameraaiw egplglrpvk rgvallarsa slaqslsmqr rglpiacvav aapgpaqtgm
      181 arlgaallqd dritalglqa edlgdpeafl alaqvaerlg kpvivlrage epgaaaliar
      241 agmarvrspe allealkilh vmgalpanal aalscstgta qlvrdlaaaq glrfppfsea
      301 qrraladdlg pgvalenpld csaavgrpap rmarifaevm sggavltlav ldcpredrcd
      361 detwqrvaea aaaararvgm plamistlpe glpearaeal mgqrliplag lsaalealaa
      421 cvalggplrr paplfmpaqg agaglpapdp aqaaatlaaq glellppgte pegpalalhl
      481 sadaaygyvl tfrmgatqvs gllplrreea rtllsglpls eedvaavvpa llsvqdyvia
      541 qkgtvaelel gfrpgsrgra lasglriraa gg
//
LOCUS       WP_258092367             615 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidyl-prolyl cis-trans isomerase [Salipiger pentaromativorans].
ACCESSION   WP_258092367
VERSION     WP_258092367.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024545.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13145.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..615
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /GO_function="GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /calculated_mol_wt=65352
     Region          12..606
                     /region_name="PRK10788"
                     /note="periplasmic folding chaperone; Provisional"
                     /db_xref="CDD:182731"
ORIGIN      
        1 maggksgitk yivwgilias flgfgafgtv nfsggvgsig svgntdistn dyaralqnel
       61 raieaqtgqp mtleqarqlg ltdqvlaqvv tnaalddeaa riglsvgdar vaeelrnvsa
      121 fqgpdgsfdr saytyalqna gmkeaefeag lrrdsarsml qaavisgttl pdtyvttlld
      181 yagqtrgftw aalgrdtltt glpvpseeel lawyeanldr ftlpetkvit fawltpdmiv
      241 dtvevdeaal rdayaereae fnmperrlte rlvfgneaea qdgmeriaag tadfetlvae
      301 rglelsdtdm gdlsraelga ageavfaaav gdvvgpaysp lgpalyrvng vlaaqqtsfe
      361 eaipdlrdal vldrarrvie gmaqslddel aggatledla netdmelgqi dwtqtsdlgi
      421 agydsfreaa qavtendypa iedlgdggif alrldelrap apqpfeevrg qvealweqdq
      481 atealvaqaq dlatriagge gfddaglnan tesgltrdar veglpasvle avfalepgea
      541 ralpgngeal vvrldsvtpv dmdsdqvqal sgmlrdqaan svandlfral nadiqsragi
      601 sidqaavnav hsnfr
//
LOCUS       WP_258092371             704 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Salipiger pentaromativorans].
ACCESSION   WP_258092371
VERSION     WP_258092371.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 704)
  AUTHORS   Clarke,T.A., Edwards,M.J., Gates,A.J., Hall,A., White,G.F.,
            Bradley,J., Reardon,C.L., Shi,L., Beliaev,A.S., Marshall,M.J.,
            Wang,Z., Watmough,N.J., Fredrickson,J.K., Zachara,J.M., Butt,J.N.
            and Richardson,D.J.
  TITLE     Structure of a bacterial cell surface decaheme electron conduit
  JOURNAL   Proc Natl Acad Sci U S A 108 (23), 9384-9389 (2011)
   PUBMED   21606337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037016.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17963.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..704
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=73371
     Region          8..>485
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          240..330
                     /region_name="tand_rpt_95"
                     /note="tandem-95 repeat; NF012211"
                     /db_xref="CDD:333740"
     Region          310..398
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
     Region          420..509
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          511..657
                     /region_name="Hint_2"
                     /note="Hint domain; pfam13403"
                     /db_xref="CDD:433179"
ORIGIN      
        1 madlvldwsa lgaygtnldn tapdavtttv etggvavdit ftaqddeaqa ftvtydgyvp
       61 egsdvdpnsh lklfgaggdg egiisptstt vldfsasdea ygdnvqnvsf llndvdggsg
      121 gdlsdlaeya lsgtgptfsf qdnvtvlayd aegnpvdvtm tvlgagtsvt gdtatgtevt
      181 nfaeqdgtvq vniagpvsri evvyenggna vqgvlisdvs fstteaggde apiavddaat
      241 tdedvpvvid vlgndsdpeg gdlsvtgata tngtvtvned ntltftpdpd yngpaeityt
      301 iedptgntat gtvdvtvnpv ndapvavdds tttgvntpvt ldpslndtdv dgddlavtgv
      361 tdptsgtvvl nddgtvtytp edgytgdatf dytvsdgngg tdtgtvtvtv gtvdpnpgen
      421 daptavedly httltspatf dptlndtdpd gdeltvtsvg dapngtvtln ddgtvtfvad
      481 egftgydsfa ytiddgnggt assyvtvevq pcftpgtlia tpqgerlved levgdrvitr
      541 dngiqeirwi grkdltghel arkphlrpvl iqqgalgknl pehdllvspn hrvlvandkt
      601 alyfeerevl aaakhltgld gvdevetlgv tyihmmfdnh evvlsngaws esfqpgdhsl
      661 kgigdaqrqe ifelfpeleh eeglkaygsa rrslkkheaq lltk
//
LOCUS       WP_258092394             372 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6456 domain-containing protein [Salipiger pentaromativorans].
ACCESSION   WP_258092394
VERSION     WP_258092394.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040428.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20057.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..372
                     /product="DUF6456 domain-containing protein"
                     /calculated_mol_wt=40413
     Region          227..362
                     /region_name="DUF6456"
                     /note="Domain of unknown function (DUF6456); pfam20057"
                     /db_xref="CDD:437889"
ORIGIN      
        1 mmichydtnv aerlpawvpe dakhylahte ggeairklar lagchastvl rqvrrietlr
       61 ddplvdgalr rlgalraraa eletkkefer mreplrdeit pdaamlarea rrvlrrlces
      121 gavlavaaem dkavvvrdtg dggstrtavv dapvaqamal kgwiaceapg risryritaa
      181 grgalsklla eqesklrgfa eaqtgfgsaa eaeaamdaaa adpqtrrrhl mtesplvlla
      241 rrrdrngapf lsddlvrage rlredfelaq mgprvtqnwd qfltggidsa ggqgfaqgpg
      301 aarerfiaal rdlgpglgdv alqcccymeg lenterrmgw aarsgkvvlr ialqrlrryy
      361 ddtvapgggl ig
//
LOCUS       WP_258092389             106 aa            linear   BCT 02-MAR-2025
DEFINITION  ArsC/Spx/MgsR family protein [Salipiger pentaromativorans].
ACCESSION   WP_258092389
VERSION     WP_258092389.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 106)
  AUTHORS   Rochat,T., Nicolas,P., Delumeau,O., Rabatinova,A., Korelusova,J.,
            Leduc,A., Bessieres,P., Dervyn,E., Krasny,L. and Noirot,P.
  TITLE     Genome-wide identification of genes directly regulated by the
            pleiotropic transcription factor Spx in Bacillus subtilis
  JOURNAL   Nucleic Acids Res 40 (19), 9571-9583 (2012)
   PUBMED   22904090
REFERENCE   2  (residues 1 to 106)
  AUTHORS   Reder,A., Hoper,D., Weinberg,C., Gerth,U., Fraunholz,M. and
            Hecker,M.
  TITLE     The Spx paralogue MgsR (YqgZ) controls a subregulon within the
            general stress response of Bacillus subtilis
  JOURNAL   Mol Microbiol 69 (5), 1104-1120 (2008)
   PUBMED   18643936
REFERENCE   3  (residues 1 to 106)
  AUTHORS   Martin,P., DeMel,S., Shi,J., Gladysheva,T., Gatti,D.L., Rosen,B.P.
            and Edwards,B.F.
  TITLE     Insights into the structure, solvation, and mechanism of ArsC
            arsenate reductase, a novel arsenic detoxification enzyme
  JOURNAL   Structure 9 (11), 1071-1081 (2001)
   PUBMED   11709171
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015893.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03960.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..106
                     /product="ArsC/Spx/MgsR family protein"
                     /calculated_mol_wt=11384
     Region          1..95
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 mvlyglkncd tcrkalkalp qaafvdvrte gvpadllaaa yarfgeklvn trsttwrgls
       61 eeerarpple llaqqptlmk rpliaegdal ylgwdkatqa algaaa
//
LOCUS       WP_258092523             819 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3772 domain-containing protein [Salipiger pentaromativorans].
ACCESSION   WP_258092523
VERSION     WP_258092523.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024021.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12607.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..819
                     /product="DUF3772 domain-containing protein"
                     /calculated_mol_wt=88816
     Region          <34..>190
                     /region_name="PRK02224"
                     /note="DNA double-strand break repair Rad50 ATPase"
                     /db_xref="CDD:179385"
     Region          124..186
                     /region_name="DUF3772"
                     /note="Protein of unknown function (DUF3772); pfam12607"
                     /db_xref="CDD:432664"
     Region          501..767
                     /region_name="MscK"
                     /note="Small-conductance mechanosensitive channel MscK
                     [Cell wall/membrane/envelope biogenesis]; COG3264"
                     /db_xref="CDD:442495"
ORIGIN      
        1 mttlfrwcaa aclalglmls atvlsaqdgk ldydaweqva araeqvidsg qasdaafeql
       61 rstiagwres flqaestsat riqtlesqla algdppaege seaediaarr adlsgelqrl
      121 qapvrraeea ytradglire ideiirnrqa dallelgpsp lnpalwpeaa ralassgrsl
      181 wselrqnlrs dikltearrd lpvilllval alllvirgpl wvrkgvdwlr grsrrgtgvw
      241 gflfslggia lpfaglvalt valhltgmag vkgrlmleql pgwggalmfv rwladqsfhr
      301 kediatlplp qiqrrearfy anvlaillvl rsvgqtvael fsysdttqav ldfpvlllca
      361 lmlsrlghil trltperaid gtmlegahfr lriarivgri vivlaiagpv msaigydavg
      421 eamvypaakt lavlalvlvl qrfvndlyel atgknaqeae slipvlagml lmlavlpvla
      481 liwgarvadl telwtrfreg fvfgdtrisp tdfltfvvvf gigyaltrll qsglrssilp
      541 ktkidpggqt aivsglgyvg iflaalvait aagldlssla ivagalsvgi gfglqnivsn
      601 fvsgiillie rpisegdwie vggnqgivks isvrstriet fdrtdlivpn sdfvsasvtn
      661 ftrsnvlgrv vvhvgvaygs dtrrvedilr rivrehdlvl lnpepmitfe efgadslnfv
      721 iravirdvgq klivtsdfhh eiarrfaeeg ieipfaqrdv wlrnpevlfq gdrsaaaaep
      781 akvdpapssl pperaesgam pagrdgdddq ghheegdgr
//
LOCUS       WP_258092528             399 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme [Salipiger
            pentaromativorans].
ACCESSION   WP_258092528
VERSION     WP_258092528.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..399
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /calculated_mol_wt=43353
     Region          2..395
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(90..91,94,167,195,198,218,221)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:99746"
     Site            221
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99746"
ORIGIN      
        1 mldlefvrgq fpafaepslq gwaffenagg sytcqpvidr ltrfyhqrkv qpyapypase
       61 aggaemdear rrlaallgve tdelsfgpst tqntyvlaqa frkfmapgea ivvtnqdhea
      121 ntgpwrrlae egieirewrm dpetghldpa dlenlldekv rlvcfphcsn vvgeinpvge
      181 italahaaga facvdgvsfa phglpdveal gcdiylfsay ktygphqgim vmrralaevl
      241 pnqahyfngd tlykkftpag pdhaqvaaca gmvdyveala ahqgvsprev sglmhaheva
      301 lmqpllefla srnsvrllgp keaenrapti avalqrpaid vakelsghgi magggdfyav
      361 ralqgqgidp aqgvlrlsfv hytsaqevek ltealdrvl
//
LOCUS       WP_258092594            1422 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4214 domain-containing protein [Salipiger pentaromativorans].
ACCESSION   WP_258092594
VERSION     WP_258092594.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025314.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13946.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1422
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..1422
                     /product="DUF4214 domain-containing protein"
                     /calculated_mol_wt=149479
     Region          423..648
                     /region_name="COG2931"
                     /note="Ca2+-binding protein, RTX toxin-related [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:442175"
     Region          575..827
                     /region_name="COG2931"
                     /note="Ca2+-binding protein, RTX toxin-related [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:442175"
     Region          829..>946
                     /region_name="ZirU_fam"
                     /note="ZirU family protein; NF040485"
                     /db_xref="CDD:468510"
     Region          <1083..1131
                     /region_name="DUF4214"
                     /note="Domain of unknown function (DUF4214); pfam13946"
                     /db_xref="CDD:433598"
     Region          1120..1185
                     /region_name="DUF4214"
                     /note="Domain of unknown function (DUF4214); pfam13946"
                     /db_xref="CDD:433598"
     Region          1175..1254
                     /region_name="DUF4214"
                     /note="Domain of unknown function (DUF4214); pfam13946"
                     /db_xref="CDD:433598"
     Region          1242..1308
                     /region_name="DUF4214"
                     /note="Domain of unknown function (DUF4214); pfam13946"
                     /db_xref="CDD:433598"
ORIGIN      
        1 mstifgtpgd dsiitsssad viyagpgddw iffgetwasr ityplesver idggdgsdtv
       61 avedvdpgnt lltptyafeq idpmlfagyt trvllltenl pnntfnivgq allrdvetlt
      121 dpdgtdhale wpdlpfyaks mpitddtgyy ynepiasrvv srpdgtvvql ldltgssdrg
      181 eerfvlramd sdgqilwest pdeasagvgg qfvgirggqi valqdggiam vwvvasddpd
      241 strdrdtvwm qifdadgtpr eapvavlssl rlysdnisle eladgtiavg tgydsggsyr
      301 ysvqsfdata aylgttgqid dysnfqtgag lvglegqsvl ihgggslgte hlsfrviggs
      361 sdgpalgtlf etpqdvriyy tsyavlsdnr faavigtddg qltlvlyedg vvsesaiaep
      421 yegawtnfgp slvadpdgga wltievnpss aegmargaha ftvfldedga lgdwfdvsny
      481 tgttnsnfya pavaatedgi lalwfhqgss vtrlaykdsd lytpepgteg ddtlpgtagd
      541 dstsagdgdd lviqsagsdr hdggdgsdtf rmgdgggtas lqygyaeaid gsgtrsvllg
      601 fetleggdgd dliegdgddn llmggpgndt itgfggtdtv dggtgtdtyl ysgaplagfg
      661 sivgielldl tagplratdd gvlfdlsdvg gyavfdrieg gtggdtiwgt qaadsilgda
      721 gddllyateg gdvldgerge dtleaglygd stltggydad lfrlhgafdt lltdfyyytd
      781 afalvgdagt aafavsyngd gnrvltfddt gasvifeglt rnnaltgtls vegemteget
      841 ltvdlsnlsd pddiqsaaap seagfemasv ryqwlrdgee ipgatgasym ltqedvgtrv
      901 tvrvdlvddf qhaesatsfg sgvvanvnda pqgevllaaf aevgtalqpd tsgisdedgl
      961 gtfsyawsrd gvvvsqdeiy tptaddagar liltvsyydg egtqerlvar sgvvqpqpvs
     1021 etgtsgddrl eggaerntls glegadtvdg gaggdlldgg adndylfgdg fdaayapdda
     1081 atvyrlyqat ldrapdgtgl anwterlftg shsvlqving fvaspefqnt ygalenegfv
     1141 tllynnvldr dpdagglasw varldegmtr tqvvlgfsqs pefvnntada arayamassq
     1201 alwsddvyrl yqatldrepe ptgfanwtar ladgtelldv isgfvnstef qntygaldna
     1261 gfvtllynnv lgrdpdatgl anwvarldgg mgraevvlgf sqstefvnst adalkawirg
     1321 idhgtgdvaq dvldggtgen wlagglyada frfaqadggs hhvldlepwd yleltgfgya
     1381 dagealahmt evggdlvfsd qgveivfaht alneltpdmv ll
//
LOCUS       WP_258092617             123 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Salipiger pentaromativorans].
ACCESSION   WP_258092617
VERSION     WP_258092617.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024375.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12973.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..123
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=13131
     Region          <49..111
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 mkpilpeqrr vasihddaaf apfdpeglre tgtsflklnp egardvgfyi yrmapgarsa
       61 phrhggaeef lilegelidn dgtvyrtgdv vwlapgteht shtetgclia vyaeageepp
      121 gga
//
LOCUS       WP_258092668             315 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-dependent oxidoreductase [Salipiger pentaromativorans].
ACCESSION   WP_258092668
VERSION     WP_258092668.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 315)
  AUTHORS   Dengler,U., Niefind,K., Kiess,M. and Schomburg,D.
  TITLE     Crystal structure of a ternary complex of D-2-hydroxyisocaproate
            dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate
            at 1.9 A resolution
  JOURNAL   J Mol Biol 267 (3), 640-660 (1997)
   PUBMED   9126843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02826.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..315
                     /product="NAD(P)-dependent oxidoreductase"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
                     /calculated_mol_wt=34268
     Region          6..309
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(145..147,149,167..169,198..199,226)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:240631"
ORIGIN      
        1 mtqppltivn qinaefgafl agldgaprvi dqagtdrpwe lpeetdvlft rargwraapd
       61 tppalprlkw vqtysagien ypdwlkngri vttgrgltsp qiaeyvlaam lrvekdldrl
      121 rarspadwte splgtlegkt lgvvgygaig qevvqraagf gmrilasrrs awtspdprvt
      181 acadaravva esdhlvlalp ltdqtrrsfd aemfalarpg qhlvnvsrgg ivdqealmaa
      241 ldsgrlsfat ldvtdpeplp eghplwthpk vlltphvsyi ggpemarfrt ktrdnlrafl
      301 agtpmtdvvs ldrgy
//
LOCUS       WP_258092576             195 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Salipiger pentaromativorans].
ACCESSION   WP_258092576
VERSION     WP_258092576.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 195)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07883.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..195
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=21371
     Region          15..195
                     /region_name="PRK09943"
                     /note="HTH-type transcriptional regulator PuuR"
                     /db_xref="CDD:182158"
     Region          103..191
                     /region_name="cupin_XRE_C"
                     /note="XRE (Xenobiotic Response Element) family
                     transcriptional regulators, C-terminal cupin domain;
                     cd02209"
                     /db_xref="CDD:380339"
     Site            order(105,120,122,133,136,140,174,176,188)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380339"
ORIGIN      
        1 meqsksgsre isdlgarlka errgrgmtlk dlaervgcsv smlskiendq aspslktlhq
       61 itsaldtsiv rlfteadgas vnlyrqgerp svmlrrkins paisierlsp tysdtlldan
      121 ihnlepgads ggdiqhegee igyvlegaae ltvdgqvyql vqgdsfyfss hlphryrnih
      181 dgktrilwva tpatf
//
LOCUS       WP_258092881            1131 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA domain-containing protein [Salipiger pentaromativorans].
ACCESSION   WP_258092881
VERSION     WP_258092881.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024487.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13087.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1131
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..1131
                     /product="AAA domain-containing protein"
                     /calculated_mol_wt=122791
     Region          194..1079
                     /region_name="DNA2"
                     /note="Superfamily I DNA and/or RNA helicase [Replication,
                     recombination and repair]; COG1112"
                     /db_xref="CDD:440729"
     Region          875..1070
                     /region_name="AAA_12"
                     /note="AAA domain; pfam13087"
                     /db_xref="CDD:463780"
ORIGIN      
        1 mapldqrfem ehgirgerfr sasglwmatd hadgesyllw liektgaavd ydvariladt
       61 vrrvrgvlar ksarevllev idlveddrei girlagadgt latltgrsrr mledgartls
      121 gragiwrqig rlvrglghlh aadlvhggia dgaiftvnme plelklggye gcvhigslgs
      181 ggagllrpgt vvshsqdwrd lgtiaarlll qsdadgmall ppeqrlldrl rlppqfafie
      241 gealaaeiee lclelervgs sgryelvaap grdllrrdap altrgliaaa dtdallafiq
      301 ddltadapqa wrnpgrhdgt iqifsqravy yvrpltdndr igritgcrvr gpgdgaiese
      361 tidarvhvar dlheardrva rtgggamawk svgadkatal savdpvewha lvlievaall
      421 egrlhhypae iidapetglv rvaartdvmr drwratfgrm eaaaelqrem lrddgtaewt
      481 ltvsdaltlg ptvpklyled vvdeggrrly vfrhegnlpv eahvllrprp drgtetqirr
      541 rlrhvvtard nvellraign pqsvgldpal saiaapgapp deldpsksda weaicrghsi
      601 dlivgppgvg ktflvsrlvs silsshptar vliaaqnhea laemerklre hlsqaerdpi
      661 vvrierpapd lsdtqlrdqa rtlldafvlg dasplsrrrr eavervlrrt gpvgdvdpeg
      721 eailrdtehl ilrsadvtla tanssvieem vaegeqfdwv iveeaarasg peligplllg
      781 arrvligdhr qlapfdaerk arlyrddage alladapeli davsdlpdav wmslevland
      841 pilradalga alrleqpfre iaetteemth arngpvsmlt eqsrmhpaic glvsdtfygg
      901 qlttvdriad rpcpiapasg alsapvvlfd lpslsrtrvq afetyegtsp cnraeaaalf
      961 ealdrlspan gatptlails pytaqcrilh arvasrvdpe tkllngfasp kgdgvfvqti
     1021 dsfqggeadl vvvttvrnnq kmgrhalgil gdrrrmnvll srakhklvlv tstgflknav
     1081 kwsepgrgpg hdleflgall rridlmaapd dpdttptasi iacgedgkvv q
//
LOCUS       WP_258092897             313 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Salipiger
            pentaromativorans].
ACCESSION   WP_258092897
VERSION     WP_258092897.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 313)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..313
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=33825
     Region          1..301
                     /region_name="PRK11139"
                     /note="DNA-binding transcriptional activator GcvA;
                     Provisional"
                     /db_xref="CDD:182990"
ORIGIN      
        1 mdkqvpfrln vplnalrafe aaarhlsike aalelgvtps avshqlrgle dalgltlmrr
       61 vgpaleltea garlapdlse gfsriieavg glrqdrnagp lrlsmlptfa ahwfsprltr
      121 ypferngfdl listtqeavd lsagvadaav rhgqgqwdgl qadllfeetv slfgapplsk
      181 ddpdemraqi sgmtlflsqy rkenyarwna tlpggpirpa avmmvdsagl alraamdgag
      241 valagveiaa fdvgagrlkq lfshwahtgg gyflvypeal ardrrvrnls rwmieasage
      301 rtlaqrqqep gad
//
LOCUS       WP_258092904             120 aa            linear   BCT 02-MAR-2025
DEFINITION  SPW repeat domain-containing protein [Salipiger pentaromativorans].
ACCESSION   WP_258092904
VERSION     WP_258092904.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 120)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015720.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03779.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..120
                     /product="SPW repeat domain-containing protein"
                     /calculated_mol_wt=12630
ORIGIN      
        1 msktwttnyd klgdgislla glalaglpfv itmtdiafws alltggliav lsaialwrph
       61 egldwarvvt giwaaispwv lidgftlavs lahlalglia lafpawrrwk ddggssalta
//
LOCUS       WP_258090899             216 aa            linear   BCT 02-MAR-2025
DEFINITION  ZapG family protein [Wohlfahrtiimonas chitiniclastica].
ACCESSION   WP_258090899
VERSION     WP_258090899.1
KEYWORDS    RefSeq.
SOURCE      Wohlfahrtiimonas chitiniclastica
  ORGANISM  Wohlfahrtiimonas chitiniclastica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cardiobacteriales; Ignatzschineriaceae; Wohlfahrtiimonas.
REFERENCE   1  (residues 1 to 216)
  AUTHORS   Wieczorek,A., Sendobra,A., Maniyeri,A., Sugalska,M., Klein,G. and
            Raina,S.
  TITLE     A New Factor LapD Is Required for the Regulation of LpxC Amounts
            and Lipopolysaccharide Trafficking
  JOURNAL   Int J Mol Sci 23 (17), 9706 (2022)
   PUBMED   36077106
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 216)
  AUTHORS   Goodall,E.C.A., Isom,G.L., Rooke,J.L., Pullela,K., Icke,C.,
            Yang,Z., Boelter,G., Jones,A., Warner,I., Da Costa,R., Zhang,B.,
            Rae,J., Tan,W.B., Winkle,M., Delhaye,A., Heinz,E., Collet,J.F.,
            Cunningham,A.F., Blaskovich,M.A., Parton,R.G., Cole,J.A.,
            Banzhaf,M., Chng,S.S., Vollmer,W., Bryant,J.A. and Henderson,I.R.
  TITLE     Loss of YhcB results in dysregulation of coordinated peptidoglycan,
            LPS and phospholipid synthesis during Escherichia coli cell growth
  JOURNAL   PLoS Genet 17 (12), e1009586 (2021)
   PUBMED   34941903
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 216)
  AUTHORS   Mehla,J., Liechti,G., Morgenstein,R.M., Caufield,J.H.,
            Hosseinnia,A., Gagarinova,A., Phanse,S., Goodacre,N., Brockett,M.,
            Sakhawalkar,N., Babu,M., Xiao,R., Montelione,G.T., Vorobiev,S., den
            Blaauwen,T., Hunt,J.F. and Uetz,P.
  TITLE     ZapG (YhcB/DUF1043), a novel cell division protein in
            gamma-proteobacteria linking the Z-ring to septal peptidoglycan
            synthesis
  JOURNAL   J Biol Chem 296, 100700 (2021)
   PUBMED   33895137
REFERENCE   4  (residues 1 to 216)
  AUTHORS   Li,G., Hamamoto,K. and Kitakawa,M.
  TITLE     Inner Membrane Protein YhcB Interacts with RodZ Involved in Cell
            Shape Maintenance in Escherichia coli
  JOURNAL   ISRN Mol Biol 2012, 304021 (2012)
   PUBMED   27335665
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018049.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06295.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Wohlfahrtiimonas chitiniclastica"
                     /db_xref="taxon:400946"
     Protein         1..216
                     /product="ZapG family protein"
                     /calculated_mol_wt=23377
     Region          6..>79
                     /region_name="DUF1043"
                     /note="Protein of unknown function (DUF1043); cl11473"
                     /db_xref="CDD:472195"
     Region          <91..>216
                     /region_name="PRK12472"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:237110"
ORIGIN      
        1 mgaevmffil ggiagvvigy fvarsgvsan nevidklkae legvkeklkt qtehftesen
       61 llhrlgtdlk dlyqhmskne istlkekfkg lvidadakld eighkakdag hkvkdaveha
      121 hetakeevaa akeksedvkk aaqdkieqaq vaiddaqkda kahaeqtieq akekasdvkd
      181 aakdatqtak dhisdakdav vetahdakdk vkdavk
//
LOCUS       WP_258092939              89 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA -binding domain-containing protein [Salipiger
            pentaromativorans].
ACCESSION   WP_258092939
VERSION     WP_258092939.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 89)
  AUTHORS   Jowsey,W.J., Morris,C.R.P., Hall,D.A., Sullivan,J.T.,
            Fagerlund,R.D., Eto,K.Y., Solomon,P.D., Mackay,J.P., Bond,C.S.,
            Ramsay,J.P. and Ronson,C.W.
  TITLE     DUF2285 is a novel helix-turn-helix domain variant that
            orchestrates both activation and antiactivation of conjugative
            element transfer in proteobacteria
  JOURNAL   Nucleic Acids Res 51 (13), 6841-6856 (2023)
   PUBMED   37246713
REFERENCE   2  (residues 1 to 89)
  AUTHORS   Knittel,V., Sadana,P., Seekircher,S., Stolle,A.S., Korner,B.,
            Volk,M., Jeffries,C.M., Svergun,D.I., Heroven,A.K., Scrima,A. and
            Dersch,P.
  TITLE     RovC - a novel type of hexameric transcriptional activator
            promoting type VI secretion gene expression
  JOURNAL   PLoS Pathog 16 (9), e1008552 (2020)
   PUBMED   32966346
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021581.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10074.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..89
                     /product="DNA -binding domain-containing protein"
                     /calculated_mol_wt=9868
ORIGIN      
        1 mrvtisslqd vppqgdvvte ydrhhmaqym rlldaadega swqdaaqiil gldtqkepgr
       61 arlvhdahle rarwlssegy rqlaagrta
//
LOCUS       WP_258092621             246 aa            linear   BCT 02-MAR-2025
DEFINITION  4Fe4S-binding leucine-rich repeat protein [Salipiger
            pentaromativorans].
ACCESSION   WP_258092621
VERSION     WP_258092621.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 246)
  AUTHORS   Peters,J.W., Stowell,M.H. and Rees,D.C.
  TITLE     A leucine-rich repeat variant with a novel repetitive protein
            structural motif
  JOURNAL   Nat Struct Biol 3 (12), 991-994 (1996)
   PUBMED   8946850
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017312.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05484.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..246
                     /product="4Fe4S-binding leucine-rich repeat protein"
                     /calculated_mol_wt=27104
     Region          6..58
                     /region_name="LRV_FeS"
                     /note="LRV protein FeS4 cluster; pfam05484"
                     /db_xref="CDD:428488"
     Region          <75..242
                     /region_name="FAD_binding_2"
                     /note="FAD binding domain; cl46878"
                     /db_xref="CDD:481218"
ORIGIN      
        1 mdgpapvdwq gaaldcgacr frarldlgqc gqgwacvhdr yakrierffl lnpdladqcl
       61 ghpyfetrmn aarvasvfrl prllsdadag vramailrlp pthaerkikd adrrvriava
      121 hrlsraqllp masdadgyvr sivarraepg mlpvmigdgd peirrivarr igegwldrfr
      181 adpdplvrre aalrrpglfv gdedlrvrha vaenggaeda aqltgdaeei iretacarla
      241 qlkega
//
LOCUS       WP_258093097             393 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class I/II-fold pyridoxal phosphate-dependent
            enzyme [Salipiger pentaromativorans].
ACCESSION   WP_258093097
VERSION     WP_258093097.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 393)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 393)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..393
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=42669
     Region          5..390
                     /region_name="PRK09147"
                     /note="succinyldiaminopimelate transaminase; Provisional"
                     /db_xref="CDD:236393"
ORIGIN      
        1 mfperfsnlp pyafprlral ldahapggpv thmsigepkh afpawvgevl aanvaefsky
       61 ppndgtpelr aaitgwiarr ygveldpatq vmplngtreg lynaamalcp etksgqqptv
      121 lipnpfyqvy avatvsvnae pvfvnatqet ghlpdygalp aevldraala yicspanpqg
      181 avadrdywer lialaekhdf qiladecyse iyrdtpppga lqvaremgad pervvifhsl
      241 skrsnlpglr sgfvaggpes larikqlrny agaplplpiq rvsekvwade ghvvenraly
      301 aekfamadri fgnvpgyapp qagfflwlpv edgetaalkl wqetgvrvlp gaylsrdtaa
      361 gnpgkgyirv alvapakete qgltrirdcl fgq
//
LOCUS       WP_258093116             374 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease [Salipiger pentaromativorans].
ACCESSION   WP_258093116
VERSION     WP_258093116.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 374)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024110.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12698.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..374
                     /product="ABC transporter permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=40682
     Region          <3..367
                     /region_name="ABC2_perm_RbbA"
                     /note="ribosome-associated ATPase/putative transporter
                     RbbA; NF033858"
                     /db_xref="CDD:468210"
ORIGIN      
        1 mtrilsftrl wallvketiq mrrdrvtfam migiplvqlm lfgfaintdp kelpaalvap
       61 tqdrftramv saleltgyyr fiapdataae aeemiargdv vfvvtvpsdf grraergdap
      121 silieadatd psvasgaist lgtvasealq reaggaqsdg qalsvvvhkr ynpegitqyn
      181 ivpgllgvil qltmvmmtam altretergt menllsmpat pleimlgkvv pylgvgavqv
      241 vvvlvaskai fdipmvghlw vilfgifvfv lalvilgyli stvsrtqmqa mqltfffflp
      301 simlsgfmfp yrgmpgwaqt lgevfplthf lrlirsvmlk gadaqtvaqs laalgvfvli
      361 lslaallrfr rtld
//
LOCUS       WP_258093265             295 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Salipiger
            pentaromativorans].
ACCESSION   WP_258093265
VERSION     WP_258093265.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 295)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..295
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=31819
     Region          9..67
                     /region_name="HTH_1"
                     /note="Bacterial regulatory helix-turn-helix protein, lysR
                     family; pfam00126"
                     /db_xref="CDD:459683"
     Region          96..284
                     /region_name="PBP2_HvrB"
                     /note="The C-terminal substrate-binding domain of
                     LysR-type transcriptional regulator HvrB, an activator of
                     S-adenosyl-L-homocysteine hydrolase expression, contains
                     the type 2 periplasmic binding fold; cd08483"
                     /db_xref="CDD:176172"
     Site            order(96..103,105..122,124..130)
                     /site_type="other"
                     /note="putative dimerization interface [polypeptide
                     binding]"
                     /db_xref="CDD:176172"
     Site            order(102..103,105,220..222,242)
                     /site_type="other"
                     /note="putative substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:176172"
ORIGIN      
        1 mdwsalppls alrafaayag sgsvaeagra lnvshaaisq qirnlethlg ttlldrskrk
       61 mhltpegdrl aaalaegfgt ilnatneltg rdadrpleis atpgfaatwl mprlpsfrah
      121 hpeisltidp satlrtlepg gldvairygn gdwpgleshl lvrspiavva atdlvgdrei
      181 ttpadlrpfp wlqelgtnea tdwfaeygve hdrslgltal pgnlmieaar qgqgvaitar
      241 lfaepdiaag rlrilfedgr kkgyflvtrp gvsrpplrhf vtwlrreaak pssgm
//
LOCUS       WP_258093274             519 aa            linear   BCT 02-MAR-2025
DEFINITION  radical SAM protein [Salipiger pentaromativorans].
ACCESSION   WP_258093274
VERSION     WP_258093274.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 519)
  AUTHORS   Benjdia,A., Leprince,J., Guillot,A., Vaudry,H., Rabot,S. and
            Berteau,O.
  TITLE     Anaerobic sulfatase-maturating enzymes: radical SAM enzymes able to
            catalyze in vitro sulfatase post-translational modification
  JOURNAL   J Am Chem Soc 129 (12), 3462-3463 (2007)
   PUBMED   17335281
REFERENCE   2  (residues 1 to 519)
  AUTHORS   Berteau,O., Guillot,A., Benjdia,A. and Rabot,S.
  TITLE     A new type of bacterial sulfatase reveals a novel maturation
            pathway in prokaryotes
  JOURNAL   J Biol Chem 281 (32), 22464-22470 (2006)
   PUBMED   16766528
REFERENCE   3  (residues 1 to 519)
  AUTHORS   Sofia,H.J., Chen,G., Hetzler,B.G., Reyes-Spindola,J.F. and
            Miller,N.E.
  TITLE     Radical SAM, a novel protein superfamily linking unresolved steps
            in familiar biosynthetic pathways with radical mechanisms:
            functional characterization using new analysis and information
            visualization methods
  JOURNAL   Nucleic Acids Res 29 (5), 1097-1106 (2001)
   PUBMED   11222759
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015983.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04055.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..519
                     /product="radical SAM protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0051539 - 4 iron, 4 sulfur cluster
                     binding [Evidence IEA]"
                     /calculated_mol_wt=57653
     Region          36..97
                     /region_name="SPASM"
                     /note="Iron-sulfur cluster-binding domain; pfam13186"
                     /db_xref="CDD:433020"
     Region          118..253
                     /region_name="SkfB"
                     /note="Radical SAM superfamily maturase, SkfB/NifB/PqqE
                     family [Cell cycle control, cell division, chromosome
                     partitioning, Coenzyme transport and metabolism]; COG0535"
                     /db_xref="CDD:440301"
ORIGIN      
        1 mmdgaaglsg lqqklnrrdt apsasmlpsd snryrcpwie gsltiladgn vtcglddphs
       61 lrsfgnvndq slteifanpe ftrlqqglaq grrcaecqly qpmpedrpsp rpalpraliv
      121 estircnlrc pnaacipnna aeirtrdsed ldrgalqrlv aeaapaleev yffnygdpfl
      181 hreavemvad iraacpdvri vtstngipla gqraeklvaa gldnivftis gmrqesyeky
      241 hvrgrlatal kglrrvaear raagaarpei vwrylvhrwt ddpeeiteai alaeelgide
      301 lsfyithipe gahsyrmapg tpqyhrfetr lavahgynvp alppnglfpl evmphfgpcr
      361 wtgwravtwa aaegdtvrvw latnqpsven gtrlvrlrlp wgavvetelp yckwgelrip
      421 rpasrrgrtv erveilvpep wfpidetgse dtrclgvltt ttasprsplp rialpckpas
      481 lparyafrka frhalltetp eaaasgeflr wkpdqiaee
//
LOCUS       WP_258093374             212 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing protein [Salipiger pentaromativorans].
ACCESSION   WP_258093374
VERSION     WP_258093374.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 212)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01966.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..212
                     /product="HD domain-containing protein"
                     /calculated_mol_wt=23164
     Region          12..193
                     /region_name="HDc"
                     /note="Metal dependent phosphohydrolases with conserved
                     'HD' motif; cl21469"
                     /db_xref="CDD:473873"
     Site            order(30,59..60,126)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:238032"
     Site            60
                     /site_type="other"
                     /note="Mg2+ binding site [ion binding]"
                     /db_xref="CDD:238032"
ORIGIN      
        1 mhrqfsnpal aeallphafd ardgahdeah llrvwrnvlr isdieggdle illaatllhd
       61 gvwidkgspq rgmasrfaae karnvlsdlg wnaersgqvc haieahsfsa giapqslear
      121 ilqdadrlds igfigvarcf yvaglrrssi cdavdpparh rplddsrfal dhfrtklmtl
      181 gdrfctatga rlaaersaqi eafyhgmlae ig
//
LOCUS       WP_258093405             176 aa            linear   BCT 02-MAR-2025
DEFINITION  invasion associated locus B family protein [Salipiger
            pentaromativorans].
ACCESSION   WP_258093405
VERSION     WP_258093405.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 176)
  AUTHORS   Coleman,S.A. and Minnick,M.F.
  TITLE     Differential expression of the invasion-associated locus B (ialB)
            gene of Bartonella bacilliformis in response to environmental cues
  JOURNAL   Microb Pathog 34 (4), 179-186 (2003)
   PUBMED   12668141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018482.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06776.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..176
                     /product="invasion associated locus B family protein"
                     /calculated_mol_wt=18744
     Region          16..175
                     /region_name="IalB"
                     /note="Invasion associated locus B (IalB) protein;
                     cl02207"
                     /db_xref="CDD:470493"
ORIGIN      
        1 mksflggvlg gallafaata slaqeesqnr vnaitdwsvf egndprecwa vttykesvnt
       61 kdgrvvsvrr gdillmvfyr pganvsgqva ftggypfang stvnvniggs efelytegew
      121 awpatpqeds kiitamkrgs davltarsgr gtltkdtfsl lgftaaveda ekrcsn
//
LOCUS       WP_258093353             197 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6088 family protein [Salipiger pentaromativorans].
ACCESSION   WP_258093353
VERSION     WP_258093353.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040319.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19570.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..197
                     /product="DUF6088 family protein"
                     /calculated_mol_wt=20838
     Region          7..170
                     /region_name="DUF6088"
                     /note="Family of unknown function (DUF6088); pfam19570"
                     /db_xref="CDD:437402"
ORIGIN      
        1 mtrlteqila httglpegmp vsakgllhlg nraavdqals rlsergqlir agrgvylrpi
       61 asrfgtrtps veqavealat qkgeiivsng aaaanalglt tqvpvrsvyl tsgrsrkmhl
      121 gkqvvelrha prwqlalanr pageavrala wlgperaeaa lttlkrkmpp gvfgelvaaa
      181 pqfptwlaqs vgkaayg
//
LOCUS       WP_258093548             145 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Salipiger
            pentaromativorans].
ACCESSION   WP_258093548
VERSION     WP_258093548.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020897.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09339.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..145
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=15475
     Region          <11..>130
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
ORIGIN      
        1 mtwpvsqkte dalraamkrl legalehtdg rlsvanlare agvsratanr atavlaefra
       61 aearfrsgsv aglkarirel eaelraargg elaelratvk tlaqqiqvla lkgeeqrrli
      121 avleaqiara dpkvlpfspp sqggi
//
LOCUS       WP_258093555             782 aa            linear   BCT 02-MAR-2025
DEFINITION  relaxase/mobilization nuclease domain-containing protein [Salipiger
            pentaromativorans].
ACCESSION   WP_258093555
VERSION     WP_258093555.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 782)
  AUTHORS   Meyer,R.
  TITLE     Identification of the mob genes of plasmid pSC101 and
            characterization of a hybrid pSC101-R1162 system for conjugal
            mobilization
  JOURNAL   J Bacteriol 182 (17), 4875-4881 (2000)
   PUBMED   10940031
REFERENCE   2  (residues 1 to 782)
  AUTHORS   Bravo-Angel,A.M., Gloeckler,V., Hohn,B. and Tinland,B.
  TITLE     Bacterial conjugation protein MobA mediates integration of complex
            DNA structures into plant cells
  JOURNAL   J Bacteriol 181 (18), 5758-5765 (1999)
   PUBMED   10482518
REFERENCE   3  (residues 1 to 782)
  AUTHORS   Byrd,D.R. and Matson,S.W.
  TITLE     Nicking by transesterification: the reaction catalysed by a
            relaxase
  JOURNAL   Mol Microbiol 25 (6), 1011-1022 (1997)
   PUBMED   9350859
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015397.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03432.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..782
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /calculated_mol_wt=86366
     Region          43..>221
                     /region_name="Relaxase"
                     /note="Relaxase/mobilization nuclease domain; cl21589"
                     /db_xref="CDD:451322"
ORIGIN      
        1 marsdrargi dpalfdrgws rvsgswqgls rgaqmvraar gyspaifkai skggchtgaq
       61 lraqltyltt ksthildsrg thdgkkqlse aeinrvarrf enqwnerhsp klghtshllm
      121 afpvgtsgde vrditqavce kffqgegsqf dyiaaihqdr ahphahivln rrskdgemff
      181 lgkdhhfnyd afreamveaa rvhgirleat rrldrgvtty aaetfeiyka rnegrppver
      241 qrtgadlaaa letvrhnali yrglaaeasr snfedvaeal erastilasg gqiqsdgaiy
      301 msqdeaafdt litefsqnir qieaaidrap aaerpvierk ltdvlasvah lnplgdrsaa
      361 lvdapsrdgi yarpnlseeh larlddgeva pklaealqgt gidaeavaar lregagnaal
      421 erqwlaqdlq giakasdldl eksadreeal drleavhvrl gdvltdvrvl raptevdevd
      481 daeaalgerl ttpgsdlaqd gsdifapser qafralvaqf rrtdfdhpfs ddpsvrraga
      541 veveearaaf dayaqrspqh aelasmaweq mtdsrmppqy avsaqdrtlh agdmdlalrd
      601 psdhlgpite elrilaryrt empddefgqa vedeinhlrs lgasrayise rsfeiedqar
      661 qdyaerryme etaptvmafv rnadvegpls eseqqdivrq iderlspdai dalragnadv
      721 ldtftedplr qlelaktylq ssevtahgpa mervldalae eqieaqrarh aaahgekgit
      781 hg
//
LOCUS       WP_258093601             777 aa            linear   BCT 02-MAR-2025
DEFINITION  relaxase/mobilization nuclease domain-containing protein [Salipiger
            pentaromativorans].
ACCESSION   WP_258093601
VERSION     WP_258093601.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 777)
  AUTHORS   Meyer,R.
  TITLE     Identification of the mob genes of plasmid pSC101 and
            characterization of a hybrid pSC101-R1162 system for conjugal
            mobilization
  JOURNAL   J Bacteriol 182 (17), 4875-4881 (2000)
   PUBMED   10940031
REFERENCE   2  (residues 1 to 777)
  AUTHORS   Bravo-Angel,A.M., Gloeckler,V., Hohn,B. and Tinland,B.
  TITLE     Bacterial conjugation protein MobA mediates integration of complex
            DNA structures into plant cells
  JOURNAL   J Bacteriol 181 (18), 5758-5765 (1999)
   PUBMED   10482518
REFERENCE   3  (residues 1 to 777)
  AUTHORS   Byrd,D.R. and Matson,S.W.
  TITLE     Nicking by transesterification: the reaction catalysed by a
            relaxase
  JOURNAL   Mol Microbiol 25 (6), 1011-1022 (1997)
   PUBMED   9350859
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015397.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03432.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..777
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /calculated_mol_wt=87795
     Region          48..>223
                     /region_name="Relaxase"
                     /note="Relaxase/mobilization nuclease domain; cl21589"
                     /db_xref="CDD:451322"
     Region          <478..>772
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
ORIGIN      
        1 mrlndavdav tgevfrdgws rirgsmqglh vakqsqlara aaghrpavfk airgggthtk
       61 sqlmnqldyl ttksthivds sgfldgkakl eakdikdlte rfakrwdagf kpklgqtthm
      121 lmsfpigtrg edvrdiatdv terffqtdeg hfdyiiavhe drdhphahlv lnrrsqegef
      181 fflgrnhrfn yddfrlamve eaekygvrle athrvdrglm hypartsevy aakeegrapr
      241 erervgtdlt rtlaeiantr tvyhslaaea srearediat alfragevla rggqldrtgd
      301 vymaedqsfe dlrslyaekl arvqgmiaek sdaerpvlek rlieiqtqvq hmqplglrss
      361 tlseapsegg iyseanidas rldrlaepdl rsridtalrg tgistsevva rietrasnaa
      421 lehqwiaddl skvaeardln lerradleqa rdilndvhve lgtllerenv lrrdgvmeae
      481 avserfhyqe davramegai rqemraeglt aeqieardwe vasraerrie teqrayleah
      541 pellarpddv idrsepyret itdvarasei trevdrimer rdartpvada vtddlraryp
      601 dmpshlargl gatyaavvei rdtevinqvr retemrdglg lgkrderlat rdetapqfdr
      661 sdrlaeeiar vldheragel sapfetdaer dafrgeiarv ldvrqldrlt sgdadaldkv
      721 ledrldrlyv akvylqsdaa tantealrqv vdeladaefe khratdvdge tergqvh
//
LOCUS       WP_258093626             544 aa            linear   BCT 02-MAR-2025
DEFINITION  endo alpha-1,4 polygalactosaminidase [Salipiger pentaromativorans].
ACCESSION   WP_258093626
VERSION     WP_258093626.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 544)
  AUTHORS   Naumov,D.G. and Stepushchenko,O.O.
  TITLE     [Endo-alpha-1-4-polygalactosaminidases and their homologues:
            structure and evolution]
  JOURNAL   Mol Biol (Mosk) 45 (4), 703-714 (2011)
   PUBMED   21954604
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015500.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03537.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..544
                     /product="endo alpha-1,4 polygalactosaminidase"
                     /calculated_mol_wt=58118
     Region          53..174
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          57..85
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276808"
     Region          90..117
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276808"
     Region          263..493
                     /region_name="COG2342"
                     /note="Endo alpha-1,4 polygalactosaminidase, GH114 family
                     (was erroneously annotated as Cys-tRNA synthetase)
                     [Carbohydrate transport and metabolism]"
                     /db_xref="CDD:441911"
ORIGIN      
        1 mkartqalla clagaaclla llpgrsefaa ralddgdwqa aaqaaeaapp dgaaspalll
       61 qrarlrseag diagagtala alhravpddp patlalaqhl raagrldead rllaalspda
      121 lspaqrarla aelqrdspaa ehafltrlre agladadqla rlgmiaaaeg rdreavaalt
      181 aadartgagl lrerltlldl llasgrrtea rsrasrwdvl mpgpgiatvl eetfaargla
      241 rtvmagadss gapvsrctlp lrswaiqlqs lvpdalhrat edlliidptd gipggafpre
      301 tmelmkhrpd gtrrlliayl sigqaesyrl ywrpdweetp pdwlmgpdpr wpgnyevrfw
      361 epgwqsliyg sadaaldril atgydgvmld gvdaferhrs erpdaaarma tfvaelarha
      421 ragdpeflvf plnghgllgr agfdtaidgl veedlyfgqq gdgvanpaeg idwkrdrlvr
      481 aterglpvll leyladeatr aataaraerd rlqpsygvrr ldrisepwpv vtgaslanga
      541 acgg
//
LOCUS       WP_258093764              95 aa            linear   BCT 02-MAR-2025
DEFINITION  FliM/FliN family flagellar motor switch protein [Salipiger
            pentaromativorans].
ACCESSION   WP_258093764
VERSION     WP_258093764.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 95)
  AUTHORS   Paul,K. and Blair,D.F.
  TITLE     Organization of FliN subunits in the flagellar motor of Escherichia
            coli
  JOURNAL   J Bacteriol 188 (7), 2502-2511 (2006)
   PUBMED   16547037
REFERENCE   2  (residues 1 to 95)
  AUTHORS   Brown,P.N., Mathews,M.A., Joss,L.A., Hill,C.P. and Blair,D.F.
  TITLE     Crystal structure of the flagellar rotor protein FliN from
            Thermotoga maritima
  JOURNAL   J Bacteriol 187 (8), 2890-2902 (2005)
   PUBMED   15805535
REFERENCE   3  (residues 1 to 95)
  AUTHORS   Chen,L.M., Kaniga,K. and Galan,J.E.
  TITLE     Salmonella spp. are cytotoxic for cultured macrophages
  JOURNAL   Mol Microbiol 21 (5), 1101-1115 (1996)
   PUBMED   8885278
REFERENCE   4  (residues 1 to 95)
  AUTHORS   Bischoff,D.S. and Ordal,G.W.
  TITLE     Identification and characterization of FliY, a novel component of
            the Bacillus subtilis flagellar switch complex
  JOURNAL   Mol Microbiol 6 (18), 2715-2723 (1992)
   PUBMED   1447979
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013236.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01052.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..95
                     /product="FliM/FliN family flagellar motor switch protein"
                     /calculated_mol_wt=9972
     Region          <2..90
                     /region_name="FliN"
                     /note="Flagellar motor switch/type III secretory pathway
                     protein FliN [Cell motility, Intracellular trafficking,
                     secretion, and vesicular transport]; COG1886"
                     /db_xref="CDD:441490"
ORIGIN      
        1 mddqpaaarp eaatpftsvp ieitvsvgra rplvrdllkl gegsvltldk rledpvelyv
       61 gdrligigal evlegaengq lavrltevvd lqspa
//
LOCUS       WP_258093795             511 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Salipiger pentaromativorans].
ACCESSION   WP_258093795
VERSION     WP_258093795.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..511
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=55993
     Region          80..486
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mtttkttvlk ralyaatalc lpaaamaqdy ssygikedvp gacsfaaida kdysgrtlni
       61 ithaipvige ptalhaqqfq eltgatvnvv hvpfgdlfqr imipfqtgqa aydvlfyasl
      121 wlgdfnpyfa evpqsyqdss gmmsvtptyk gvatwngkml qytmdgdrhy lkyradvfen
      181 pemqamfkek tgrdltvpat weeynevaaa fndmdfdgdg qpnfgsaevt krddlmfsaf
      241 isrvapyakh pdvkggfffd letmtplvnt pgwvhglelf veaqksmppg gtsfglgdei
      301 fsfgggqtlm syswddafiq amqedspirn kvaaailpga hevwnrdtga wdhfdepnra
      361 pyvtwgwssa vaansqnqdm afdylcffan eantlsdlqi grfgvnpyrd thfdpafyet
      421 emgwdaavae syattlrdid gganqvfdlr vpgvgefmss laagvarams geasaqeald
      481 gvaaewgqiv drigadrvra ayanvvaled r
//
LOCUS       WP_258093829              74 aa            linear   BCT 02-MAR-2025
DEFINITION  AbrB/MazE/SpoVT family DNA-binding domain-containing protein
            [Salipiger pentaromativorans].
ACCESSION   WP_258093829
VERSION     WP_258093829.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 74)
  AUTHORS   Mate,M.J., Vincentelli,R., Foos,N., Raoult,D., Cambillau,C. and
            Ortiz-Lombardia,M.
  TITLE     Crystal structure of the DNA-bound VapBC2 antitoxin/toxin pair from
            Rickettsia felis
  JOURNAL   Nucleic Acids Res 40 (7), 3245-3258 (2012)
   PUBMED   22140099
REFERENCE   2  (residues 1 to 74)
  AUTHORS   Hamon,M.A., Stanley,N.R., Britton,R.A., Grossman,A.D. and
            Lazazzera,B.A.
  TITLE     Identification of AbrB-regulated genes involved in biofilm
            formation by Bacillus subtilis
  JOURNAL   Mol Microbiol 52 (3), 847-860 (2004)
   PUBMED   15101989
REFERENCE   3  (residues 1 to 74)
  AUTHORS   Kamada,K., Hanaoka,F. and Burley,S.K.
  TITLE     Crystal structure of the MazE/MazF complex: molecular bases of
            antidote-toxin recognition
  JOURNAL   Mol Cell 11 (4), 875-884 (2003)
   PUBMED   12718874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015947.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04014.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..74
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=7830
     Region          5..74
                     /region_name="MazE_antitoxin"
                     /note="Antidote-toxin recognition MazE, bacterial
                     antitoxin; cl00877"
                     /db_xref="CDD:469969"
ORIGIN      
        1 mievkirkvg nsavmtlsae mlalldakeg dtlyavrtdd gglklmtenp elqaalaaae
       61 ivmdenrdll qala
//
LOCUS       WP_258093926            2366 aa            linear   BCT 02-MAR-2025
DEFINITION  LamG-like jellyroll fold domain-containing protein [Salipiger
            pentaromativorans].
ACCESSION   WP_258093926
VERSION     WP_258093926.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 2366)
  AUTHORS   Thompson,D., Pepys,M.B. and Wood,S.P.
  TITLE     The physiological structure of human C-reactive protein and its
            complex with phosphocholine
  JOURNAL   Structure 7 (2), 169-177 (1999)
   PUBMED   10368284
REFERENCE   2  (residues 1 to 2366)
  AUTHORS   Beckmann,G., Hanke,J., Bork,P. and Reich,J.G.
  TITLE     Merging extracellular domains: fold prediction for laminin G-like
            and amino-terminal thrombospondin-like modules based on homology to
            pentraxins
  JOURNAL   J Mol Biol 275 (5), 725-730 (1998)
   PUBMED   9480764
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024777.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13385.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2366
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..2366
                     /product="LamG-like jellyroll fold domain-containing
                     protein"
                     /calculated_mol_wt=251336
     Region          1108..1258
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          1354..1529
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          <1818..>1870
                     /region_name="PFM_aerolysin_family"
                     /note="pore-forming module of aerolysin-type beta-barrel
                     pore-forming proteins; cl40431"
                     /db_xref="CDD:394801"
ORIGIN      
        1 mlqfdqlvsl nfqgivvvfg rvagsdspdi yfnvlgpgtd pdsaaldwtg ftrlsfpdqv
       61 rqvgmglitv ladaetiqps tapfrvvtdq kyisivqqsa rgtlyvnrfr llktgsgsnq
      121 ktvsytlnpa wevrfmrshk qdvpldksdt qeyldadgqp ffepalelsm vdavadgnfd
      181 vallpvtgse tlawqfwtla pdgttinlfn fppssdglfd itgkalgeny giapdssftv
      241 ipekeadplp lagppraalf vkhekvvqsd gssigvkras rvmltlpvtl ndetetvtid
      301 saignagtma alneailada ivpaefdlvf ttgsyldlva gegdnplaia gpyemgfmaa
      361 prmlsdglti lggdpaadpk taapyvkvvd ggkleigfgd gtaavschsl hqvlfpqtws
      421 eitvaysgmg anpftltvnd npvpltacta gaeptgapvt tiggastgye galnririav
      481 ggadvldlps navdysstpp ttpnmisngl taavygpkpe pstapvsint ngafhvdaag
      541 lsyyvgladf iapkdpacli dgsdgllhly yrgkddllsv aqystrsara tfytdwstdw
      601 aegapmalar envalyrnip sedwshvstt vlaapdnsqt gflnfvahrv gtymndsaik
      661 vtasavspll cdvtvtgpeg vgsevwtglp rsiepfsriw ngagagnpdd qavlnqsrpf
      721 ydytgttlsv laatqaqdgy flftsvpglp ltlgsatvee gskpdlatlt ftssappnwa
      781 edatlthrwp dmpstargvt dvlsgrsdsy dyskvetpgt rafalpvalt rsddamahvv
      841 ifvrdtlkdf sakvsagkas drcdveiagy klpdvprdqt afarvlngdd kgysypkdyt
      901 dkivpqiyal tngltasvln atadapsspl ayagllraly qglhydasti aplektgaaa
      961 iqkaelvtds dttsvtgsrl fgaviadppt ngglgrlsdt asytkgqapv lmpginggwm
     1021 rvvpqfslqn aarsasyvgf didksytpal qlaidsdltv egwlkpdatt rgetsrllty
     1081 netgtlnhpd lpvqymmgtq qgpglitgtd tylgasfnft gpdltlqtyv kpasdtasgq
     1141 vlmvsavrgg atfltlsvtp igkaelsflg gkatvtsagt lpakkwscvt lsvkdigagk
     1201 valklyvgdg apvtveaeng fadplgaltv gsntgggmqa tlngvafwqr alsdkevres
     1261 vlygfpdndp qlgirwnlae gagtqimnsa asgpdydtki inpanpawda agafdvpyag
     1321 rndyvlvsnr ivkdwthval sskqgwglal dgansgtvad gdafnpgpsf aleawvapdt
     1381 vnnkqiilek pgsyslavtt lgqvsltvhl sqessdyrlp ptlfdhsvkt aiaagkssyv
     1441 avnfttgtvp ndkgsteyva qryfikasiy vdgqlaaenn vedldqpvsi tnadsafylg
     1501 iggaqtfefi gkvshvrvwg rtlnsaeiar vnafhtlpas rdgltaswdf deqsgtvakd
     1561 avgdndmvls snqlwalwqd vasaeiwvdg gaslpqrkta adlgdygdsq mtiggalaeg
     1621 sltlpftgqf ddirlfsirl tgtqidesnn tplggqeagl naywmvdags ggvlydmtgk
     1681 gnngsllpka rppvwspdaa piqneaeyvv naldgavdyh saqiagqpsv veyaslqtda
     1741 ygavysvmmr gyfyltdvgn telqtgykvg dldtifvgqv qskpsivgyi eggpplpsen
     1801 qtlaywwgdm ggparlystt stvayveset ktwsfsasqg stfkgefnik ggvyqvtktg
     1861 tsvgvgaeae tevlenklki glkakvggdl ghtdsvgqsh sqtqaltasl tpsgtweped
     1921 nilnpvvgrr yiqnnlgaai vksatadlym malkgtqtpv gyqlipneti pvdtniidfp
     1981 inpkyvkngt ldgkvglvnd pdypnanaer gsyfkpveay alkrriekqe qqlaayydqf
     2041 stdkyrvigs lgrvkdelge npafnfgdkt nqrslcnnyv wsaggglrke eqsvansyse
     2101 tytgassltv aggidfsadi gtpfggfyle advllgntws mtatksasas nafslactvs
     2161 pteflsapim etdangtllf kgyektpapg kvdayrymaf llapaaenft alnqvvdpnw
     2221 lnngttaaas amrealgdpt qpwrilyrtt yvsrvpapfq pvkddttspt itppanvpsn
     2281 ywlmaivnkf vpnpaptple igtaidavlg sratpgvlkd lipwwesfya kaqeygseef
     2341 ielaelrvdl ldymlsayea aayaqs
//
LOCUS       WP_258093957             192 aa            linear   BCT 02-MAR-2025
DEFINITION  nitroreductase family protein [Salipiger pentaromativorans].
ACCESSION   WP_258093957
VERSION     WP_258093957.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 192)
  AUTHORS   de Oliveira,I.M., Henriques,J.A. and Bonatto,D.
  TITLE     In silico identification of a new group of specific bacterial and
            fungal nitroreductases-like proteins
  JOURNAL   Biochem Biophys Res Commun 355 (4), 919-925 (2007)
   PUBMED   17331467
REFERENCE   2  (residues 1 to 192)
  AUTHORS   Hecht,H.J., Erdmann,H., Park,H.J., Sprinzl,M. and Schmid,R.D.
  TITLE     Crystal structure of NADH oxidase from Thermus thermophilus
  JOURNAL   Nat Struct Biol 2 (12), 1109-1114 (1995)
   PUBMED   8846223
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013077.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00881.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..192
                     /product="nitroreductase family protein"
                     /calculated_mol_wt=20129
     Region          9..170
                     /region_name="Nitro_FMN_reductase"
                     /note="nitroreductase family protein; cl00514"
                     /db_xref="CDD:444950"
     Site            order(13,15,35,37..38,40,43..44,46,48,50,52..57,117,
                     119..120,123..124,127..128,140..141,154)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:380311"
     Site            order(15,17,19,47,140..141)
                     /site_type="other"
                     /note="FMN binding site [chemical binding]"
                     /db_xref="CDD:380311"
ORIGIN      
        1 mpspnpaamd flltrrsrpa ktltgpapdr dalipiltaa arspdhgkle pwrfvvlega
       61 aldrlaaaal argaalglap etaekgrrqf adsplcvavv espkdspkvp aieqtysaga
      121 vclallnaal asgwganwlt gwisedrsfv etelglaahe riagflhlgt etvappdrpr
      181 pdiaaitewv ta
//
LOCUS       WP_258093970             740 aa            linear   BCT 02-MAR-2025
DEFINITION  sialate O-acetylesterase [Salipiger pentaromativorans].
ACCESSION   WP_258093970
VERSION     WP_258093970.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 740)
  AUTHORS   Surolia,I., Pirnie,S.P., Chellappa,V., Taylor,K.N., Cariappa,A.,
            Moya,J., Liu,H., Bell,D.W., Driscoll,D.R., Diederichs,S.,
            Haider,K., Netravali,I., Le,S., Elia,R., Dow,E., Lee,A.,
            Freudenberg,J., De Jager,P.L., Chretien,Y., Varki,A.,
            MacDonald,M.E., Gillis,T., Behrens,T.W., Bloch,D., Collier,D.,
            Korzenik,J., Podolsky,D.K., Hafler,D., Murali,M., Sands,B.,
            Stone,J.H., Gregersen,P.K. and Pillai,S.
  TITLE     Functionally defective germline variants of sialic acid
            acetylesterase in autoimmunity
  JOURNAL   Nature 466 (7303), 243-247 (2010)
   PUBMED   20555325
REFERENCE   2  (residues 1 to 740)
  AUTHORS   Bitto,E., Bingman,C.A., McCoy,J.G., Allard,S.T., Wesenberg,G.E. and
            Phillips,G.N. Jr.
  TITLE     The structure at 1.6 Angstroms resolution of the protein product of
            the At4g34215 gene from Arabidopsis thaliana
  JOURNAL   Acta Crystallogr D Biol Crystallogr 61 (Pt 12), 1655-1661 (2005)
   PUBMED   16301800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015585.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03629.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..740
                     /product="sialate O-acetylesterase"
                     /calculated_mol_wt=76654
     Region          <56..>118
                     /region_name="SASA"
                     /note="Carbohydrate esterase, sialic acid-specific
                     acetylesterase; pfam03629"
                     /db_xref="CDD:427409"
     Region          228..442
                     /region_name="COG2931"
                     /note="Ca2+-binding protein, RTX toxin-related [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:442175"
     Region          <305..>350
                     /region_name="Peptidase_M10_C"
                     /note="Peptidase M10 serralysin C terminal; cl23859"
                     /db_xref="CDD:451582"
     Region          395..646
                     /region_name="COG2931"
                     /note="Ca2+-binding protein, RTX toxin-related [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:442175"
     Region          <611..739
                     /region_name="Peptidase_M10_C"
                     /note="Peptidase M10 serralysin C terminal; cl23859"
                     /db_xref="CDD:451582"
ORIGIN      
        1 matpiiilag qsnasrisde ivaaldaeyg agryrlvevy aagapltrar dgnadwatrg
       61 elpnqllrna iaalndtpng rfvgiiwvqg egdtvgasap eeyasdfval fgglrralva
      121 efgsgvtgae tarivisels eqapaaegrg awdeiiaaqe rlgasgrlis svdpddvaar
      181 agirqnamfs dglhysdafa qrlanalvat ltdppeqslg gggaagatnr gtarddrfln
      241 dgaatvmegl agddtyyvdn prdriieaeg agydrvfaal sldlrshsqy leeltltgta
      301 dltgigngqa nritgnagdn llngawgddr lyggagndtf rdskgadlmv ggagddlyyv
      361 ddpgdrvvea agegwdrvls svsfalrdhs qhlenlaltg tgnidgtgna qpnritgnag
      421 dnvlngaggs dtlvggagnd tfrddggadr mvggsgddry yidnrgdviv eapgegfdrv
      481 fssisielrq hsqhletltl lgrgdltgig ngqanritgn agdnflngaw gddtlvggag
      541 ndtlrdssga dlliggsgnd vyyldspgdr iveregegrd lvfasvdtal rnhsqyieal
      601 tltgtedlsg vgnagdnvlr gnsgnnvlng awgddtligg agndtlcdsk gddlfsgggg
      661 rdvflftdgf gndriadfei rqwgevidls gvsaitgfad laanhlrdig gnaviddghg
      721 ntitlvgida gdlgandflf
//
LOCUS       WP_258093988             679 aa            linear   BCT 02-MAR-2025
DEFINITION  glutamine amidotransferase [Salipiger pentaromativorans].
ACCESSION   WP_258093988
VERSION     WP_258093988.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 679)
  AUTHORS   Petrova,T., Cuff,M.E., Wu,R., Kim,Y., Holzle,D. and Joachimiak,A.
  TITLE     Novel hexamerization motif is discovered in a conserved cytoplasmic
            protein from Salmonella typhimurium
  JOURNAL   J Struct Funct Genomics 8 (1), 19-25 (2007)
   PUBMED   17968677
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07090.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..679
                     /product="glutamine amidotransferase"
                     /calculated_mol_wt=73714
     Region          21..679
                     /region_name="COG5426"
                     /note="Uncharacterized protein STM3548, contains class I
                     glutamine amidotransferase domain [General function
                     prediction only]"
                     /db_xref="CDD:444178"
ORIGIN      
        1 mtgqivfdpl lpwvaiyalg avalagvvla lwrgltgwpl rffaglilva altqpsfqee
       61 draplsdivl mvvdksasqq ladrlevtes aaqalearia arpntelrri evgdgegdsg
      121 tqlmtalsaa maeeprgria gifllsdgrl hdlerapglp apmhllltgh qddwdrrliv
      181 knapafailg epvtltlrve ddgaapqetr ttldisvdgg eaqsftvpvg edvelpielp
      241 hgglnvirfa vpegageltd rnnaalvqin gvrdrlrvll vsgephaggr twrnllksdg
      301 svdlvhftil rppekqdgvp vtelsliafp trelflekie dfdliifdry krrgilpaiy
      361 ldnvrnyven ggavlvaagp dfasadsiyr splaeilpae ptarvieegy rptvtdlgqr
      421 hpvtaglsga eswgrwlrqi dltplegdvv msgvegkpll ildrvgegrv allasdhawl
      481 wsrgyegggp qlellrrlah wmmkepelee ealwaeatgq tmriirrsld etvgavtvtr
      541 pdggteevtl devspgrfea lyegpeigly rlsegdqeav iglgpaapre feqtiasgda
      601 lepvidtmrg gvmrlddgip siravsagrp aagrgwiglt preayetmdv rqipllpawl
      661 tlllasgfii gawlregrr
//
LOCUS       WP_258094074             782 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Salipiger pentaromativorans].
ACCESSION   WP_258094074
VERSION     WP_258094074.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 782)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 782)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 782)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 782)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..782
                     /product="ATP-binding protein"
                     /calculated_mol_wt=82446
     Region          <399..769
                     /region_name="PRK13557"
                     /note="histidine kinase; Provisional"
                     /db_xref="CDD:237425"
ORIGIN      
        1 mhrpalyhqt hgapvpaagl dhlgrwaqlc aalafvlafv iligdrlfpg lplsrlwpgf
       61 aamvpptals vmgaalalta arfgwrrsar llagavmafa lwrlgavavt lsqidlhsdr
      121 vsvgtalglv lvcvalfelt aradslllqp glpatlggil alvcltgyaf dapglydffl
      181 lsgmsvptal cllllsmail lqdghrswpr hllgrsagar larlllvpsv vapfvltala
      241 laaadhgvfs ialshallad vlmvsavgsl vliarnrsqe earmitemaw lrdvldatea
      301 aafgfddagd lvlanrlals ltdgapaewl qetaffipgt yepltggrhp rnlvspgggd
      361 arlyagwldg agrehslrls shrigdalsg rhmtiltild eteswsardq itrierleav
      421 gvmaggaahe fsniigviql sadvgllkcs gedaapfeai vracdrgadl terlltlsrd
      481 slgtlaahdl valtratapv liaalpgdie lafalpdapl yaeldrsdfe aallnlvina
      541 anairaapga arlirltlrp agemasvtvq drgagmdeet lrrattpfft srageggtgl
      601 glsmveafar rsggelsirs apgagttvei tlplreesge rhdgepaepv qslaglrvlv
      661 veddpqfrea lpaallqlga everfveaer alerlergpg fdlvlsdirl pggmsgtdla
      721 eivaqrfpel pmlllsgfqg krgavppggl vlrkpvrlrv lanairtvma aqkrsggagr
      781 ak
//
LOCUS       WP_258094118             312 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Salipiger
            pentaromativorans].
ACCESSION   WP_258094118
VERSION     WP_258094118.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 312)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..312
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=33972
     Region          2..292
                     /region_name="PRK11013"
                     /note="DNA-binding transcriptional regulator LysR;
                     Provisional"
                     /db_xref="CDD:236819"
ORIGIN      
        1 mnirqleafh avmetgsvtl agerlgisqp avskllksfs encgfrlftr sggrmlptsd
       61 aqllasevsr lfsgtdriqk laravrdrew gevtiaappa lsarflahal gplmaaqknm
      121 hisitsqssp rvaelvegqq idiglsvqpf ehpnvrselv mrfamicalp aahplaskrl
      181 irvedlkdep figlarddcs imtidrafql rgvqkravve vpmsetacdf vaggagvsiv
      241 ppfvglgyge dklvrrpvvp lttmnvwiml pasrppslat erivevlrak lrhydvdagr
      301 dsapdlenle qs
//
LOCUS       WP_258094122             335 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Salipiger pentaromativorans].
ACCESSION   WP_258094122
VERSION     WP_258094122.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00528.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..335
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=36282
     Region          1..335
                     /region_name="TM_PBP2"
                     /note="Transmembrane subunit (TM) found in Periplasmic
                     Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
                     transporters which generally bind type 2 PBPs. These types
                     of transporters consist of a PBP, two TMs, and two
                     cytoplasmic ABC ATPase subunits, and...; cl00427"
                     /db_xref="CDD:444901"
     Site            order(112..113,116..117,122,133..136,138..147,150..151,
                     153,212..213,215,217,220..221,223,227..228,231,248,
                     262..263,266,273..276,279..280,289..290,307..308,311..312,
                     314..315,318..319,322..323)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:119394"
     Site            order(139..153,273..278)
                     /site_type="active"
                     /note="conserved gate region [active]"
                     /db_xref="CDD:119394"
     Site            order(153,207,279,287,290,307)
                     /site_type="active"
                     /note="putative PBP binding loops [active]"
                     /db_xref="CDD:119394"
     Site            order(232..244,250..251,255)
                     /site_type="active"
                     /note="ABC-ATPase subunit interface [active]"
                     /db_xref="CDD:119394"
ORIGIN      
        1 mlryllgkla vlvptffgit vvafgfvrvl pgdpimlmag ergltperha qlmaqygfdr
       61 plwqqylsyl gdllrgdlgt slvthrpvte dfltffpatm elglcamala iciglplgvl
      121 aavkrgswfe qismsaalvg ysmpifwwgl lmiilfsgtl gwtpvsgris lmyyfpqvtg
      181 fmlidslisg qagafrsavq hlilpsvvla tiptaviarq srsamlevls edfvrtarak
      241 glgpalvvgr halrnalipv vtviglqvgs lmagailtet ifswpgigkw ivdsiskrdy
      301 pvvqggllvi avvvmivnli vdllyavinp rirhg
//
LOCUS       WP_258094136             372 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme [Salipiger
            pentaromativorans].
ACCESSION   WP_258094136
VERSION     WP_258094136.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..372
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /calculated_mol_wt=37853
     Region          3..356
                     /region_name="CsdA"
                     /note="Selenocysteine lyase/Cysteine desulfurase [Amino
                     acid transport and metabolism]; COG0520"
                     /db_xref="CDD:440286"
ORIGIN      
        1 mrdlsdirad lpalarlgyl ntgtagpmpa vaadamrrai aedaergris gkrfvkidem
       61 mercrvgmag ivgaqpeqia ltsgtvdgls ivldrltlpp garlltsdme hpaalgllrs
      121 faarrglvve glalegtdda eaaarvaaal ktpaallmls hvgyangrvl plpqiaaaar
      181 aanvpllvdg aqaagaiald lvalgvdfya wpgqkwlmgp egagalyiap dalsllggas
      241 sppetakdvq rgtlpkpvwa gmeaaldwra aqgseaelta ataeaaeamr salaqvpgve
      301 laeaprmagl vcfamagqea gavlmalgkt rlagrdvpgp apvrlscgff tspdeiaata
      361 gtlatlttda va
//
LOCUS       WP_258094198             126 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Salipiger
            pentaromativorans].
ACCESSION   WP_258094198
VERSION     WP_258094198.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 126)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 126)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 126)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 126)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..126
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=13299
     Region          1..>99
                     /region_name="TauB"
                     /note="ABC-type nitrate/sulfonate/bicarbonate transport
                     system, ATPase component [Inorganic ion transport and
                     metabolism]; COG1116"
                     /db_xref="CDD:440733"
ORIGIN      
        1 mlevrgltir agdtvlveel sldletgrlt cligpsgygk ssvikrlsgv lapelrrakg
       61 qarleetels lpheaiayqp qqdtlfpwlt ilenaalglg fepitgipsv aglcftsgng
      121 gehgpf
//
LOCUS       WP_258094266             137 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6636 domain-containing protein [Salipiger pentaromativorans].
ACCESSION   WP_258094266
VERSION     WP_258094266.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042550.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20341.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..137
                     /product="DUF6636 domain-containing protein"
                     /calculated_mol_wt=14174
     Region          16..131
                     /region_name="DUF6636"
                     /note="Family of unknown function (DUF6636); pfam20341"
                     /db_xref="CDD:466491"
ORIGIN      
        1 mfrslllagl clagpamadv spfrtpsdni rcwvgtgegp pdlsceivaf tgtpnvarpa
       61 scagpwghky vllargpatm ecgapvrgks atgvdvapyg vsadwggisc isertgltcr
      121 nadghgflls rrvlkvw
//
LOCUS       WP_258094219             367 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Salipiger pentaromativorans].
ACCESSION   WP_258094219
VERSION     WP_258094219.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 367)
  AUTHORS   Woodson,K. and Devine,K.M.
  TITLE     Analysis of a ribose transport operon from Bacillus subtilis
  JOURNAL   Microbiology (Reading) 140 (Pt 8), 1829-1838 (1994)
   PUBMED   7921236
REFERENCE   2  (residues 1 to 367)
  AUTHORS   Hogg,R.W., Voelker,C. and Von Carlowitz,I.
  TITLE     Nucleotide sequence and analysis of the mgl operon of Escherichia
            coli K12
  JOURNAL   Mol Gen Genet 229 (3), 453-459 (1991)
   PUBMED   1719366
REFERENCE   3  (residues 1 to 367)
  AUTHORS   Adams,M.D., Wagner,L.M., Graddis,T.J., Landick,R., Antonucci,T.K.,
            Gibson,A.L. and Oxender,D.L.
  TITLE     Nucleotide sequence and genetic characterization reveal six
            essential genes for the LIV-I and LS transport systems of
            Escherichia coli
  JOURNAL   J Biol Chem 265 (20), 11436-11443 (1990)
   PUBMED   2195019
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014684.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02653.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..367
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=38989
     Region          32..338
                     /region_name="TM_PBP1_branched-chain-AA_like"
                     /note="Transmembrane subunit (TM) of Periplasmic Binding
                     Protein (PBP)-dependent ATP-Binding Cassette (ABC)
                     transporters which are involved in the uptake of
                     branched-chain amino acids (AAs), as well as TMs of
                     transporters involved in the uptake of...; cl00454"
                     /db_xref="CDD:444914"
     Site            228..246
                     /site_type="active"
                     /note="TM-ABC transporter signature motif [active]"
                     /db_xref="CDD:119323"
ORIGIN      
        1 mldnpyhnkt lqwlayaavf lligivpllt dddfllnqla tygvygllav sislcwgsgg
       61 ilnlgqgiaf glgaygmamt mqmqsqapgt ippfmannal etlpifwepf wntglgiala
      121 llvptlfyli fgglmfvarv sgpffaimtl ailsalatvf valqpytngv ngispptglv
      181 iagtkidpys staywlvfal llictftakl ltqsrfglvv ralkddperv rflgynvavy
      241 etlvyalsgl maaaagasfa vltqyvspaq fevgfsisav iwaaiggrgs llwamlgaft
      301 vqgaqsyagd aflntwilil gfsfilvvrf lpggfaglae lllgrlaslr ggrreefgqa
      361 pakgaak
//
LOCUS       WP_258094282             161 aa            linear   BCT 02-MAR-2025
DEFINITION  LPS assembly lipoprotein LptE [Salipiger pentaromativorans].
ACCESSION   WP_258094282
VERSION     WP_258094282.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 161)
  AUTHORS   Sperandeo,P., Lau,F.K., Carpentieri,A., De Castro,C., Molinaro,A.,
            Deho,G., Silhavy,T.J. and Polissi,A.
  TITLE     Functional analysis of the protein machinery required for transport
            of lipopolysaccharide to the outer membrane of Escherichia coli
  JOURNAL   J Bacteriol 190 (13), 4460-4469 (2008)
   PUBMED   18424520
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016290.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04390.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     gene            1..161
                     /gene="lptE"
     Protein         1..161
                     /product="LPS assembly lipoprotein LptE"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /GO_process="GO:0043165 - Gram-negative-bacterium-type
                     cell outer membrane assembly [Evidence IEA]"
                     /calculated_mol_wt=17166
     Region          18..161
                     /region_name="COG5468"
                     /note="Predicted lipoprotein involved in
                     lipopolysaccharide assembly [Function unknown]"
                     /db_xref="CDD:444219"
ORIGIN      
        1 mwlsdrrnfl laaaalagcg ftpaygpqgg gsallgsial eepanrygyd fnsrfeerlg
       61 rasgpyalki rletqsqglg sladgqttry rlvgrvfytl tpvgseeali agrtnaftsy
      121 satgstaatq aaerdakrrl mviladqvid rllldadtlp k
//
LOCUS       WP_258094313             263 aa            linear   BCT 02-MAR-2025
DEFINITION  SseB family protein [Salipiger pentaromativorans].
ACCESSION   WP_258094313
VERSION     WP_258094313.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 263)
  AUTHORS   Ruiz-Albert,J., Mundy,R., Yu,X.J., Beuzon,C.R. and Holden,D.W.
  TITLE     SseA is a chaperone for the SseB and SseD translocon components of
            the Salmonella pathogenicity-island-2-encoded type III secretion
            system
  JOURNAL   Microbiology (Reading) 149 (Pt 5), 1103-1111 (2003)
   PUBMED   12724372
REFERENCE   2  (residues 1 to 263)
  AUTHORS   Hama,H., Kayahara,T., Ogawa,W., Tsuda,M. and Tsuchiya,T.
  TITLE     Enhancement of serine-sensitivity by a gene encoding rhodanese-like
            protein in Escherichia coli
  JOURNAL   J Biochem 115 (6), 1135-1140 (1994)
   PUBMED   7982894
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018837.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07179.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..263
                     /product="SseB family protein"
                     /calculated_mol_wt=27836
ORIGIN      
        1 mtedtpldla haameaapqd daarlrfyer ladselflll treaegdrie pelfeladas
       61 fvlvfdreer lsqfvgkaap yaalsgrava smlagqgigl avnievapss illpaqavdw
      121 laetlghgpq eteahieevt apaglpevlv taldtklata agfarcawla gvaysdntrs
      181 hllafagtvp gaedalarav nealvfsgie agaldvlfir dsdplaaslt rvglrfdlpe
      241 lqeperveri apgsdpdspp ilr
//
LOCUS       WP_258094388             685 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing
            protein [Salipiger pentaromativorans].
ACCESSION   WP_258094388
VERSION     WP_258094388.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 685)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02737.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..685
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /GO_function="GO:0070403 - NAD+ binding [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=71807
     Region          9..678
                     /region_name="fadB"
                     /note="fatty acid oxidation complex subunit alpha FadB;
                     PRK11730"
                     /db_xref="CDD:183293"
ORIGIN      
        1 msdpvrfsle gtvarividn ppvnvlsqav rrglmaafda aetsgakrvv lsgaerafva
       61 gsdtrefdlp pqppylpdif arieafplpv vaaingaalg gglelalvca arvavpgaql
      121 gmpevtlgvv pgaggtqrlp rligfgaals lisegrviga tearelglvd llaadaadea
      181 arlvlpdraa tgampapprd adavetartr aarrardqia pqkaidlvda atrlplkegl
      241 aleretfltl ktsdqaaalr hvffaeraam argrkggaai etavvvgggt mgsaisyala
      301 qggttvalve tdtaaverar tviaglyaea vargklssga adaalaarhs fhvgyddlpp
      361 aqiaieavve dltvkrqvfa aldaalppdt ilatntsyld pnaiaeglrn perflglhff
      421 spahvmklve viragetspe tlatvlrlag rlrkipvlag vcdgfignri ltgyrqicdv
      481 mllegclpaq vdaamrdfgm amgpyevqdl sgldiahanr krlgwaertd lryvpiadri
      541 veetgrlgrk tgagwydyag geaqraplie amvieasara gltrraftda eiaerasaam
      601 iveglrilee giaadaadid lvmvhgygfp rwrggpmhla ertglpeila riagyaaadp
      661 lswsvpgnlr ravaggqgle avrtd
//
LOCUS       WP_258094412             139 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Salipiger pentaromativorans].
ACCESSION   WP_258094412
VERSION     WP_258094412.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 139)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 139)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..139
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=14668
     Region          5..132
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
ORIGIN      
        1 mtpaelagia arayrhmtpw teaefaatls hptalltvge aafvlgrvva deaeilalat
       61 dpdgqrrgaa raalarfera aaardaveif levaaanapa rgfyfacgya pvgrrtayyt
      121 cpdgsrddal lmrkalpen
//
LOCUS       WP_258094426             728 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Salipiger
            pentaromativorans].
ACCESSION   WP_258094426
VERSION     WP_258094426.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 728)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 728)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 728)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 728)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..728
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=78720
     Region          55..727
                     /region_name="type_I_sec_LssB"
                     /note="type I secretion system ATPase, LssB family;
                     TIGR03375"
                     /db_xref="CDD:274550"
ORIGIN      
        1 mlagqarkaa lravpqdapa ntpgpaprhs drvrarsdli rvlaglrgie akapdileal
       61 srhegadggi ganalraglt aagllpetqe pdrlvpglwp alalmtngqa vlvleqeagg
      121 ltiydagapg rraevplgef apyfsgtllr aeapvqalse thaatageah wfwgqfhrft
      181 rafgevalgs fvanllavsv alfslqvydr viphqsestl wvlaagafma llleaflkva
      241 rsqlldgagr qiemtvqell marllgmrsd tpgrspaqlf ssmrefgsvr efftastvga
      301 ladipfifvf lllvwsiagp vvgvlilggv lmvlpgvfmq krmirltrem qgasakqsrl
      361 lqetvveldt iksqraedrf rrlweeltav qalksseqrr lsailtfwsq giqqatyvta
      421 visgtylvfa geftvgsiia tgiltsrtla pltqlsgima rwgnvkgald gldgiahaaq
      481 drsasrsylr rdhlrgqyel rdvtfrydpe gasvvdlqtl aiqpgqtlai lgangsgkst
      541 llkmltglya pasgkllidg temaqieprd lrrcigylgq dvrlfhgtlr dnlnlsller
      601 ddarlyeald faglgqyvka hpkgldldir dggeglsvgq rqsigwarlw lqdpdiclld
      661 eptaaldqtl ektlisrleg wlkgrtavia thrvpilala drtmvlahgr laidgprdqv
      721 lghlrkga
//
LOCUS       WP_258094451             226 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar hook capping FlgD N-terminal domain-containing protein
            [Salipiger pentaromativorans].
ACCESSION   WP_258094451
VERSION     WP_258094451.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 226)
  AUTHORS   Luo,M., Niu,S., Yin,Y., Huang,A. and Wang,D.
  TITLE     Cloning, purification, crystallization and preliminary X-ray
            studies of flagellar hook scaffolding protein FlgD from Pseudomonas
            aeruginosa PAO1
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 65 (Pt 8), 795-797
            (2009)
   PUBMED   19652342
REFERENCE   2  (residues 1 to 226)
  AUTHORS   Kuo,W.T., Chin,K.H., Lo,W.T., Wang,A.H. and Chou,S.H.
  TITLE     Crystal structure of the C-terminal domain of a flagellar
            hook-capping protein from Xanthomonas campestris
  JOURNAL   J Mol Biol 381 (1), 189-199 (2008)
   PUBMED   18599076
REFERENCE   3  (residues 1 to 226)
  AUTHORS   Ohnishi,K., Ohto,Y., Aizawa,S., Macnab,R.M. and Iino,T.
  TITLE     FlgD is a scaffolding protein needed for flagellar hook assembly in
            Salmonella typhimurium
  JOURNAL   J Bacteriol 176 (8), 2272-2281 (1994)
   PUBMED   8157595
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015896.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03963.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..226
                     /product="flagellar hook capping FlgD N-terminal
                     domain-containing protein"
                     /calculated_mol_wt=23468
     Region          16..222
                     /region_name="flgD"
                     /note="flagellar basal body rod modification protein;
                     Reviewed; PRK12813"
                     /db_xref="CDD:237214"
ORIGIN      
        1 metgttssst ataagqsaag gksggetgll ssdfetflrm lttqmqnqdp lnpvdatdya
       61 tqlatfssve qqvltndllr dlteqlagsa fqalaswigl ealaeapvyf ngrpivlrpe
      121 vaagadsarl vvtdaagetv qtltldpsep lvawagvdae gdrlasgvys ftvqsysega
      181 lieetaaqvy npivearqdg drilltlsdg teieasrvsa lrsgta
//
LOCUS       WP_258094579              87 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6455 family protein [Salipiger pentaromativorans].
ACCESSION   WP_258094579
VERSION     WP_258094579.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040427.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20056.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..87
                     /product="DUF6455 family protein"
                     /calculated_mol_wt=9372
     Region          5..85
                     /region_name="DUF6455"
                     /note="Family of unknown function (DUF6455); pfam20056"
                     /db_xref="CDD:466276"
ORIGIN      
        1 mketlgdpar hfwmtrsvar amglnlseem lsgrlepddy admvtccrgc alveacekwl
       61 gtqtavsaap ppgccngmml aqlkklh
//
LOCUS       WP_258094621             267 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Salipiger pentaromativorans].
ACCESSION   WP_258094621
VERSION     WP_258094621.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 267)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 267)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..267
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=27630
     Region          12..245
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(109,111,113..114,180..181,198,245)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 msahassaaa twrvggteia clvdgggrfg advfpsadde traarlaaag leaidtvyna
       61 yllrhddggi dlvdtgcgta fgdaggalag qlaafgiapa qvnrlimthl hgdhagggtr
      121 dgaavfpeae lvlhaaelpr wqgvdapggr llaamagrir tvadgedlgr dlrswhlpgh
      181 tpghmglrfg edlvlvadil hseamqlpdp acasryddda atatrtrlaa leeivtrgll
      241 wsgshmlgpg kfarltrdag gyrriap
//
LOCUS       WP_258094642             379 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Salipiger
            pentaromativorans].
ACCESSION   WP_258094642
VERSION     WP_258094642.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 379)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 379)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 379)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..379
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=40014
     Region          5..378
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(92,122,124,155,157,360..362,364,366)
                     /site_type="active"
                     /db_xref="CDD:173838"
ORIGIN      
        1 mdfalseeqv aifdmaygfg qeriapfaae wetagtipke lwkeagalgl ggiyvseeng
       61 gsglsrldat lifealsmac psvasflsih nmcarmiday gsealrarfl dsavsmdtvl
      121 sycltepgag sdaaalrtra etgaagytlt gtkafisggg ysdayivmar tggegahgvs
      181 ailvedgtag lsfggleqkm gwraqptrqv qmdgcavpag nllgeegkgf ryamagldgg
      241 rlnisacslg aaqaaldatl aymaerqafg qrldafqalq frladmeiel qaarvflrqa
      301 awkldqgapd atkfcamakk fvteagsrva dqclqlhggy gyladygiek ivrdlrvhqi
      361 legtneimrl ivarglvaa
//
LOCUS       WP_258094778             338 aa            linear   BCT 02-MAR-2025
DEFINITION  ribonuclease E/G [Salipiger pentaromativorans].
ACCESSION   WP_258094778
VERSION     WP_258094778.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 338)
  AUTHORS   Callaghan,A.J., Marcaida,M.J., Stead,J.A., McDowall,K.J.,
            Scott,W.G. and Luisi,B.F.
  TITLE     Structure of Escherichia coli RNase E catalytic domain and
            implications for RNA turnover
  JOURNAL   Nature 437 (7062), 1187-1191 (2005)
   PUBMED   16237448
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021653.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10150.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..338
                     /product="ribonuclease E/G"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /calculated_mol_wt=36244
     Region          103..327
                     /region_name="RNase_E_G"
                     /note="Ribonuclease E/G family; pfam10150"
                     /db_xref="CDD:462965"
ORIGIN      
        1 mkgrtialde ldgteaaali vdgqlqdlli dsdhprpgti yratalrpmk gqggmflqtp
       61 dgtaflrqvk glapgdallv qvtgyaepgk aipvttrllf ksryaivtpg apginvsrqi
      121 kdddlrdell aiahevmegd hglilrssca gahaqdiaed ieamarlaaq vlqdsagepe
      181 tlvegdgpha lawrewdtgd ldaapgsfer hnvhdmidal rsplvplagg gsmcieptra
      241 lvavdintgg dtspaaglka nmsalrelpr qlrlrglggq ilvdpapapk kdrrqmeqvl
      301 raalrqdete tilagwtqlg lmelqrkrer vplrevlt
//
LOCUS       WP_258094780             416 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme [Salipiger
            pentaromativorans].
ACCESSION   WP_258094780
VERSION     WP_258094780.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..416
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /calculated_mol_wt=43322
     Region          9..415
                     /region_name="CsdA"
                     /note="Selenocysteine lyase/Cysteine desulfurase [Amino
                     acid transport and metabolism]; COG0520"
                     /db_xref="CDD:440286"
ORIGIN      
        1 mtaitpelle tirakfayve dcpftgprif fenaggaltl ksvvetsarf aaipdnqgrd
       61 npasaalgei iakaredaal flgaetgkvl lgesgtellf rliadaclgt pegvvlgstv
      121 ehpasrsaca rwaevagkrh vlvphddatg vvtaeayaaa vtedvrvati lhtspvtgmg
      181 mdvpaivaai rskapealii vdgiqhachg gidiagydid gyvispykvf srhgyglawa
      241 sdrlsalphd aliggpagsw elgtrdtgay atfsdvveyf ewlggavsde teprariaaa
      301 graihdheaa ltramlhgtg nlaglaempg vtivggvdnp areglvsfya egrasvdlva
      361 alsgegirvh srkadhysgn iltplgqadc vrvslchyns eaevaaflaa mtrvlg
//
LOCUS       WP_258094797             103 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6476 family protein [Salipiger pentaromativorans].
ACCESSION   WP_258094797
VERSION     WP_258094797.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039467.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20082.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..103
                     /product="DUF6476 family protein"
                     /calculated_mol_wt=11112
     Region          11..100
                     /region_name="DUF6476"
                     /note="Family of unknown function (DUF6476); pfam20082"
                     /db_xref="CDD:466284"
ORIGIN      
        1 msqtpdpenl pepanlrflr llvtvltgvm iaglltilam ivisyrtara plpetitlpg
       61 gatataytqg sdwyavvted drilifdras gdlrqtikie sqp
//
LOCUS       WP_258094810             240 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein [Salipiger
            pentaromativorans].
ACCESSION   WP_258094810
VERSION     WP_258094810.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 240)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..240
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=25721
     Region          22..233
                     /region_name="PBP2_HisGluGlnArgOpine"
                     /note="Substrate binding domain of ABC-type
                     histidine/glutamate/glutamine/arginine/opine transporter;
                     the type 2 periplasmic-binding protein fold; cd13698"
                     /db_xref="CDD:270416"
     Site            order(29,32,70,87,89..90,95,129,132..134,169)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:270416"
ORIGIN      
        1 mkkillgtav lafsagmala qdvvrmgteg ayppynfind agevdgfere fgdelckrae
       61 ltcewvtnew dsiipnlvsg nydtiiagms inderdevid ftqdyippat ssyvalseda
      121 dlsgvvaaqt stlqagyise sgatllefat adeivaalrn geadavffdt dylapivees
      181 agelifvgep vvlgrgtgmg iresdtelkd kfdaaitsmk adgslntllv kwfgedtdty
//
LOCUS       WP_258094837             361 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Salipiger pentaromativorans].
ACCESSION   WP_258094837
VERSION     WP_258094837.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 361)
  AUTHORS   Levitz,R., Chapman,D., Amitsur,M., Green,R., Snyder,L. and
            Kaufmann,G.
  TITLE     The optional E. coli prr locus encodes a latent form of phage
            T4-induced anticodon nuclease
  JOURNAL   EMBO J 9 (5), 1383-1389 (1990)
   PUBMED   1691706
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024565.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13166.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..361
                     /product="AAA family ATPase"
                     /calculated_mol_wt=42445
     Region          <94..340
                     /region_name="RloC"
                     /note="Wobble nucleotide-excising tRNase [Translation,
                     ribosomal structure and biogenesis]; COG4694"
                     /db_xref="CDD:443729"
ORIGIN      
        1 mtntpklyey ksidklvtri rddlndhsfv llfayngtgk trlsmafkdv akkkgerdtl
       61 yfnaftedlf vwdndldgde nrylninsas affedfqsld leerifsfle ryasfnfrid
      121 yenwrvifyr datenikvsr geqnlfiwcv flaicqlvld nheaykwvkh iyvddpissl
      181 ddnnaiavas dlaqllksgk draksvvsth hslffnvmwn elkkvkhkay fyhrpqgvel
      241 htlrttdetp ffhhvamlse lqmavesdql ythhfnmmrs ilektatffg ykdfsacihg
      301 iddealysra lnllshgkys iyeprdmvgd nkdlfkdifk afleryrfel peiikqkepa
      361 q
//
LOCUS       WP_258094861             144 aa            linear   BCT 02-MAR-2025
DEFINITION  DMT family transporter [Salipiger pentaromativorans].
ACCESSION   WP_258094861
VERSION     WP_258094861.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 144)
  AUTHORS   Jack,D.L., Yang,N.M. and Saier,M.H. Jr.
  TITLE     The drug/metabolite transporter superfamily
  JOURNAL   Eur J Biochem 268 (13), 3620-3639 (2001)
   PUBMED   11432728
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10007109
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..144
                     /product="DMT family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=14807
     Region          1..144
                     /region_name="ydcZ"
                     /note="Uncharacterized membrane protein YdcZ, DUF606
                     family [Function unknown]; COG3238"
                     /db_xref="CDD:442470"
ORIGIN      
        1 mpvhaltmla aglgipilaa lnarlgahig spaaaavilf cvalsattiv lftldprpia
       61 ravdaprhlf lgglfvafyv lsvtyvapqf gvgravffvl lgqlisaali dhfglfgarv
      121 spftlnragg iglmalgvwm aqrg
//
LOCUS       WP_258094887             645 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Salipiger pentaromativorans].
ACCESSION   WP_258094887
VERSION     WP_258094887.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 645)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..645
                     /product="AMP-binding protein"
                     /calculated_mol_wt=69793
     Region          18..631
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(260,263..268,270..271)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(263,385..386,410..415,498,510,513,524,607)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(263,304..305,356,358..359,362,385..386,410..415,498,
                     510,513,521..524,588)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(304,358..359,362,385,521..523,582,588)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
ORIGIN      
        1 mfqpgsdiqr tstltsflkg cgidsyeelv rrsnedpdwf wgqiidhagi rfarpysrlr
       61 disegpesir wavgstlnlt etcldariad glgdkvaidw vgedgsrrrw tysdltaeas
      121 rvasalatrg vrpgqavgiy mpmipeieaa llgiarlgav avplfsgfap haivsrlnda
      181 davavltada tprrgkpvwm eatlaqaltd vpsvhtvisl rrfgdavadp ardldwtetv
      241 graspefaav pvsaddtfli aytsgttgrp kgvvhthlgv qakatadfll cldmkrddrh
      301 lwmtdmgwvm gpltllsvll sgstlvlaeg apsmpgdpfr llrlasemev thlgvaptlv
      361 rqfmtqdtet lsgydlsplr ivastgepwt edawlwqldh icrrravpln isggtelfga
      421 iltstvlhel kpggfsaqal gvgakvlrqd gseaapgevg elvvtqpplg ltpairgdrd
      481 ryldtywstf pglwrhgdwv rcdpdgtwyi lgrsddtlni agkrigppei eaaltetgev
      541 vdaaaiaapd dikgvavvcv cvaapnvspd aelvnrlkdr vgeivskpfr preihfveal
      601 pktrsmktmr rivraaflge dpgdlssisn petiqpiadl qkeks
//
LOCUS       WP_258094902             275 aa            linear   BCT 02-MAR-2025
DEFINITION  type IV secretion system protein [Salipiger pentaromativorans].
ACCESSION   WP_258094902
VERSION     WP_258094902.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 275)
  AUTHORS   Christie,P.J.
  TITLE     Type IV secretion: the Agrobacterium VirB/D4 and related
            conjugation systems
  JOURNAL   Biochim Biophys Acta 1694 (1-3), 219-234 (2004)
   PUBMED   15546668
REFERENCE   2  (residues 1 to 275)
  AUTHORS   Yeo,H.J., Yuan,Q., Beck,M.R., Baron,C. and Waksman,G.
  TITLE     Structural and functional characterization of the VirB5 protein
            from the type IV secretion system encoded by the conjugative
            plasmid pKM101
  JOURNAL   Proc Natl Acad Sci U S A 100 (26), 15947-15952 (2003)
   PUBMED   14673074
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019608.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07996.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..275
                     /product="type IV secretion system protein"
                     /calculated_mol_wt=29724
     Region          1..>114
                     /region_name="PRK11281"
                     /note="mechanosensitive channel MscK; cl46976"
                     /db_xref="CDD:481316"
     Region          64..238
                     /region_name="VirB5_like"
                     /note="VirB5 protein family; cl02193"
                     /db_xref="CDD:445702"
     Region          71..92
                     /region_name="3-helical coiled coil"
                     /note="3-helical coiled coil [structural motif]"
                     /db_xref="CDD:271354"
     Region          188..205
                     /region_name="3-helical coiled coil"
                     /note="3-helical coiled coil [structural motif]"
                     /db_xref="CDD:271354"
ORIGIN      
        1 mprrmfisap fraltlasvl alcspfvtsa palaqgvpvv dtqniaqniq qlrqmiedei
       61 lqneqlvqlr eqlatlteql aelqrtyeal trlaelpeii rtqmedelng lldqefgdii
      121 atiqaiktgd fsgltgsgav eietqmdrvl adlgfdedtl semarsgnpg avrvatqatt
      181 galvsaaaqn syedagqsle rvdrlvglid dmdelkesvd lntrvtaela ialvamwqle
      241 aiqtvgdgtg gvidaatiae eqrfmeftlp elnad
//
LOCUS       WP_258094985             541 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Salipiger pentaromativorans].
ACCESSION   WP_258094985
VERSION     WP_258094985.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 541)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..541
                     /product="AMP-binding protein"
                     /calculated_mol_wt=59054
     Region          7..541
                     /region_name="PRK08162"
                     /note="acyl-CoA synthetase; Validated"
                     /db_xref="CDD:236169"
ORIGIN      
        1 mgwlanetgl gkcaanfvpl tplsflirak qvypdhmavv ygphrktyae yyervtrlas
       61 altkigvapg dvvatllpni paqaeahfgv pacgavlnti ntrldidtia yildhgeakv
      121 vlcdpqfiph laeaielmet daptvievad hhggaphlge ymeyeefltt gdpdfawimp
      181 edeweslaln ytsgttgrpk gvvyhhrgay lnamgqvlsw rivlhpvylt ivplfhcngw
      241 chtwmmpavg gtvvccrdit pkalynafad egvthfggap ivlnmlvnak dedkrdfpqi
      301 vevftagapp apatlakiet mgfnvtqvyg ltetygpdve cawqsawdgi egperaalka
      361 rqgvampfme hitvmdekmq viaadgetkg eimhrgngvm kgylkapkat reafeggyfh
      421 sgdiavlhpd sylqiadrak diiisggeni ssveventlm aheavllcav vakpdekwge
      481 vpcafvelkp gheaseaeli afsrerlagf ktpkkvvfee lpktstgkiq kfqlraraka
      541 l
//
LOCUS       WP_258095028              56 aa            linear   BCT 02-MAR-2025
DEFINITION  NepR family anti-sigma factor [Salipiger pentaromativorans].
ACCESSION   WP_258095028
VERSION     WP_258095028.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 56)
  AUTHORS   Campagne,S., Damberger,F.F., Kaczmarczyk,A., Francez-Charlot,A.,
            Allain,F.H. and Vorholt,J.A.
  TITLE     Structural basis for sigma factor mimicry in the general stress
            response of Alphaproteobacteria
  JOURNAL   Proc Natl Acad Sci U S A 109 (21), E1405-E1414 (2012)
   PUBMED   22550171
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037848.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18557.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..56
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..56
                     /product="NepR family anti-sigma factor"
                     /GO_function="GO:0016989 - sigma factor antagonist
                     activity [Evidence IEA]"
                     /calculated_mol_wt=6199
     Region          11..43
                     /region_name="NepR"
                     /note="Anti-sigma factor NepR; pfam18557"
                     /db_xref="CDD:465800"
ORIGIN      
        1 mghtrrkdtg aeaidenlrr vyqdmleekv pdrfldliaq lraqdeggep tggdsk
//
LOCUS       WP_258094132            1356 aa            linear   BCT 02-MAR-2025
DEFINITION  Calx-beta domain-containing protein [Salipiger pentaromativorans].
ACCESSION   WP_258094132
VERSION     WP_258094132.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 1356)
  AUTHORS   Schwarz,E. and Benzer,S.
  TITLE     The recently reported NIbeta domain is already known as the
            Calx-beta motif
  JOURNAL   Trends Biochem Sci 24 (7), 260 (1999)
   PUBMED   10390612
REFERENCE   2  (residues 1 to 1356)
  AUTHORS   Schwarz,E.M. and Benzer,S.
  TITLE     Calx, a Na-Ca exchanger gene of Drosophila melanogaster
  JOURNAL   Proc Natl Acad Sci U S A 94 (19), 10249-10254 (1997)
   PUBMED   9294196
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015140.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03160.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..1356
                     /product="Calx-beta domain-containing protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007154 - cell communication [Evidence
                     IEA]"
                     /calculated_mol_wt=144315
     Region          <31..>214
                     /region_name="caca"
                     /note="sodium/calcium exchanger 1; TIGR00845"
                     /db_xref="CDD:273296"
     Region          <268..>474
                     /region_name="caca"
                     /note="sodium/calcium exchanger 1; TIGR00845"
                     /db_xref="CDD:273296"
     Region          <488..>681
                     /region_name="caca"
                     /note="sodium/calcium exchanger 1; TIGR00845"
                     /db_xref="CDD:273296"
     Region          595..686
                     /region_name="Calx-beta"
                     /note="Calx-beta domain; cl02522"
                     /db_xref="CDD:413355"
     Region          <742..>923
                     /region_name="caca"
                     /note="sodium/calcium exchanger 1; TIGR00845"
                     /db_xref="CDD:273296"
     Region          974..1008
                     /region_name="HemolysinCabind"
                     /note="RTX calcium-binding nonapeptide repeat (4 copies);
                     pfam00353"
                     /db_xref="CDD:459777"
     Region          <1024..1069
                     /region_name="DUF4214"
                     /note="Domain of unknown function (DUF4214); pfam13946"
                     /db_xref="CDD:433598"
     Region          1061..1126
                     /region_name="DUF4214"
                     /note="Domain of unknown function (DUF4214); pfam13946"
                     /db_xref="CDD:433598"
     Region          1116..1195
                     /region_name="DUF4214"
                     /note="Domain of unknown function (DUF4214); pfam13946"
                     /db_xref="CDD:433598"
     Region          1183..1250
                     /region_name="DUF4214"
                     /note="Domain of unknown function (DUF4214); pfam13946"
                     /db_xref="CDD:433598"
ORIGIN      
        1 mpvvsistaf ategdalyft vtldeaafdv vtvnyqtvlg tannsdlyya itnsnnrgtl
       61 tfapgetskt ltvytrsdsd derdenimlr lsglsenasf asgedieram giildndgqg
      121 snlallvsda elvegdggtk yaefdlvlsr padesfsvsy rtrdisatag edyaewngsa
      181 rfavgdqikt vrvpvygdnl aevtesfalv vtdpgspnlp veglvgeavi rdddtqpqpv
      241 vsisaakave geglvytvtl septfdavtm tyravpgtas dgdlyyspts synwntltfa
      301 pgetsrtvti yterdstder desvvlhlsg ltenasfagg eevlsgtgii ldndgtgsdl
      361 allvsdvrlv egdsgtkeav feirlsqpap tafsvgyrtr disatagedy eetvgslsfa
      421 egeevkvvrv pvygdtvaem tesfalvide ptglsvattg lageatiadd dntpgpvvsv
      481 svarategea liytvtlsep agdevalryq sfagtadead ldydfesdrn intlsfapgq
      541 isktiivyte rdstderdes iglrlynlte nasfaggedq lftngvildn dgvggnmtll
      601 vsgatllegd dgtkeavfel rlsqpaseai lltystrdit akagedyeaa vgtvsfavge
      661 evkvvrvpvy gdtevefter fglrvdasav pylgienvea eavirdddtt pnpvitvspa
      721 tategdallf tltlsepsdd avtvdykplv gtadendlyy sltsrnntgt ltfepgqtsk
      781 tviihserds iderdevffm efsnvigasl adgapsvsvs gtildddgvg lnrtatvqpm
      841 vlrehgvasf iyeipvelst pasaplsfnv eaidqtalag ldyrlldtrl nfaegqsvat
      901 itievlgdss ietteaftls lepvagtpya gsiadtviyi rpgpllpspq ddvlvgtvgd
      961 dlidllagsd hyrglegndt afgnhgadti iggagsdrln ggpgadllig gevedvstta
     1021 gaqvyrlyqa tldrlpdtqg ydnwsarids gemtllqvig gfvnspefqs tygalnnraf
     1081 vellylnvlg readatglan wtarldsgts reqvvlgfaq saefidntne pasayvaagv
     1141 aatyaddvfr iyqatldrap dlnglmnwsa rlgegteilt visgfvnste fqsvygnvsn
     1201 tgfvtllynn vlgrdpdang lanwtqrled gmsreavvlg faasaefiak tetafmtymr
     1261 ategdsfrgg pdndliyggm ladefafdvs dkgrdrvlel dawdtlsfsg fgyadaddar
     1321 shmtevgkdl vfadqgvsvv fmradletva nmeilv
//
LOCUS       WP_258095051             426 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Salipiger pentaromativorans].
ACCESSION   WP_258095051
VERSION     WP_258095051.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 426)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 426)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 426)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 426)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..426
                     /product="ATP-binding protein"
                     /calculated_mol_wt=47552
     Region          7..422
                     /region_name="envZ"
                     /note="osmolarity sensor protein; Provisional; PRK09467"
                     /db_xref="CDD:236531"
ORIGIN      
        1 mffqwlkrym prglygraal ililpvitlq lvvsvvfiqr hfedvsnqms relareiklv
       61 larpelaepl altvralpdd gvpaagqrrw ydfsglvvar tlerfvpgfe rvllpddydv
      121 rlyvrdaqgl seiafarrrv sptnahqlfv nmmvfgvlmt lvaflylrnq lrpitrlara
      181 aeafgrgrhm pyspsgavev raagnafldm rnrierqieq rtmmlsgvsh dlrtpltrlr
      241 lglsmleded replerdved mqrlidafld fargdsqegt aeptdpialv eaivadaqra
      301 gtpvrvahle grgevtlrpg amrralenli gnavrygrrc evsatltdks lrlrveddgp
      361 gipperreea lrpfvrldpa rnqdkgtgvg lglaiaadia rahggvlrlg qsetlgglra
      421 diviar
//
LOCUS       WP_258095154             140 aa            linear   BCT 02-MAR-2025
DEFINITION  acetyl-coenzyme A synthetase N-terminal domain-containing protein,
            partial [Salipiger pentaromativorans].
ACCESSION   WP_258095154
VERSION     WP_258095154.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027503.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16177.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..>140
                     /product="acetyl-coenzyme A synthetase N-terminal
                     domain-containing protein"
     Region          5..>140
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
ORIGIN      
        1 msdtyppsse fvtgahidaa rydemyarsl sdpdgfwaeq aqrldwmarp tkikntcfdf
       61 gkvdikwyed gvlnvaynci drhlktranq taiifepddp sdpaqhityr elydkvnrma
      121 nvllsqgvmr gdrvviylpm
//
LOCUS       WP_258095164             380 aa            linear   BCT 02-MAR-2025
DEFINITION  FliM/FliN family flagellar motor switch protein [Salipiger
            pentaromativorans].
ACCESSION   WP_258095164
VERSION     WP_258095164.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 380)
  AUTHORS   Paul,K. and Blair,D.F.
  TITLE     Organization of FliN subunits in the flagellar motor of Escherichia
            coli
  JOURNAL   J Bacteriol 188 (7), 2502-2511 (2006)
   PUBMED   16547037
REFERENCE   2  (residues 1 to 380)
  AUTHORS   Brown,P.N., Mathews,M.A., Joss,L.A., Hill,C.P. and Blair,D.F.
  TITLE     Crystal structure of the flagellar rotor protein FliN from
            Thermotoga maritima
  JOURNAL   J Bacteriol 187 (8), 2890-2902 (2005)
   PUBMED   15805535
REFERENCE   3  (residues 1 to 380)
  AUTHORS   Chen,L.M., Kaniga,K. and Galan,J.E.
  TITLE     Salmonella spp. are cytotoxic for cultured macrophages
  JOURNAL   Mol Microbiol 21 (5), 1101-1115 (1996)
   PUBMED   8885278
REFERENCE   4  (residues 1 to 380)
  AUTHORS   Bischoff,D.S. and Ordal,G.W.
  TITLE     Identification and characterization of FliY, a novel component of
            the Bacillus subtilis flagellar switch complex
  JOURNAL   Mol Microbiol 6 (18), 2715-2723 (1992)
   PUBMED   1447979
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013236.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01052.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..380
                     /product="FliM/FliN family flagellar motor switch protein"
                     /calculated_mol_wt=40400
     Region          <230..>373
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
ORIGIN      
        1 mgeparqddv lgqkasaarr afearamspa kalrralsrt advlwdlalv thgvsqemld
       61 qdgvverlpa ntllvlldgp egalglavid revmtgviev qtllqvtqmp vedrpltqtd
      121 aamtaplidg tmerlacyle ghplhaqfag yrfgamveda rnaglllnaa gyrsyrvavd
      181 lalgrrkgdl vlvlpdrpha eeaelaaqva pgtpgpheqk mkllpvrmea vlctltlplr
      241 aaqrlqpgdl lplppealdg vaflagsgaa vaggrlgqmn gmravrlawp egaprseqap
      301 epteraepap lpasppevaa peqapdlevs emsealpelp pmafdtgdfs fdaapmeeea
      361 sedetldfdf aaapldiees
//
LOCUS       WP_258095282             106 aa            linear   BCT 02-MAR-2025
DEFINITION  rod-binding protein [Salipiger pentaromativorans].
ACCESSION   WP_258095282
VERSION     WP_258095282.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021638.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10135.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..106
                     /product="rod-binding protein"
                     /calculated_mol_wt=11225
     Region          1..101
                     /region_name="FlgJ1"
                     /note="Rod binding protein domain [Cell motility];
                     COG3951"
                     /db_xref="CDD:443151"
ORIGIN      
        1 mdiktsmaal qvtsaqiaep gaaapdapns aarefeamfl tqmvdemmkq vdigdfgggq
       61 aeetwryfla eafgreiaeq ggagiaaslr galeaytesr tmeqrs
//
LOCUS       WP_258095299             278 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein [Salipiger
            pentaromativorans].
ACCESSION   WP_258095299
VERSION     WP_258095299.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 278)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..278
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=29848
     Region          27..262
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mntfkltvaa aalcfsavpa ladsiwenie asgevvcggi qnypptsfhv ggdleyagyg
       61 pnicrqivad lgaemgkelk vvwkettwqs vvldlqagri dlfpgmtate erkkaldmag
      121 plyrmtdcvi arkgtepmat weeyntadst famvtgtaqv aflesdvpea kimslkemse
      181 simavqagra eylvqelpic lqtftttpni feaytvpkpe hgspssagir kdddgrfsdf
      241 vqawadghra egtvapliid gfaaagmdvs nipagief
//
LOCUS       WP_258095301             506 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Salipiger pentaromativorans].
ACCESSION   WP_258095301
VERSION     WP_258095301.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 506)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..506
                     /product="AMP-binding protein"
                     /calculated_mol_wt=54313
     Region          39..495
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(161,164..169,171..172)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(164,278..279,298..303,383,395,398,409,489)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(164,204..205,253,255..256,259,278..279,298..303,383,
                     395,398,406..409,470)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(204,255..256,259,278,406..408,464,470)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
ORIGIN      
        1 maltsknweg dgflhllera apeqpyasep engvwtsrtv gdltararli acglsargig
       61 agdrvalmlg thfdycaavl glamlravwv pvglrqigsa vsfavseaqv slliaedava
      121 dvvqeagcpv llrpetgldg vlggapeiaf aapdpsdlmm isftsgttgk pkgvpvtham
      181 lrysaesaai ssaaedgavy ytwepfhhig gaqviilpli rkvslalapr ftasgfwnev
      241 rttgatrihh lggilqmllk qpprpddryh kvsvawgggc dadtwravea rfgvkvhegy
      301 gmteassltt vnteglpglv grplpwfdva ildrdgapva qgekgeivvt prpgresalf
      361 agytnsdeat realrggrlf tgdmgsldae grlrfhgrmk dtirvrgenv sawevenvve
      421 qhdgvaacaa ipvkaeigea dikiyvqpva gqqltgeslf dwlkgrlaph qlpqfisfvt
      481 dfertpsqri mkhkldpmrg gdwtrh
//
LOCUS       WP_258095390             561 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Salipiger pentaromativorans].
ACCESSION   WP_258095390
VERSION     WP_258095390.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 561)
  AUTHORS   Todone,F., Vanoni,M.A., Mozzarelli,A., Bolognesi,M., Coda,A.,
            Curti,B. and Mattevi,A.
  TITLE     Active site plasticity in D-amino acid oxidase: a crystallographic
            analysis
  JOURNAL   Biochemistry 36 (19), 5853-5860 (1997)
   PUBMED   9153426
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013434.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01266.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..561
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=59564
     Region          4..561
                     /region_name="PRK12842"
                     /note="putative succinate dehydrogenase; Reviewed"
                     /db_xref="CDD:237224"
ORIGIN      
        1 meqydvivag sgagglsaai taadqglsvl viekadtygg ttarsggwiw ipnnaqakre
       61 giqdsaekar tyieteagnq fdaarvdafi engpkmldwf drntevqftl gsyfpdyhpg
      121 qpggldggrs lnadpvnlkt lgknadrlap pipeatfmgm mvgsnrelkh ffeatrsvks
      181 fgyvgallar ygyekirygk tqrltngtal varlaksafd rgveirtgtp lddlvvedgr
      241 vtgivtggkt lkarkgvvla tggfpfdmgm rkklyrhapt geghfspasp tntgdamrat
      301 aglnaaiseg ykhpaawvpi slvprkdgtq gtfphfvdrg kpgviavlks gkrfvneans
      361 yhdygeglia ahdgngpaes wliidhptlr yyglgfvkpy piplgpalrs gylkrgktlr
      421 elaqaagidp aglektvtdf nrnaretgdd pefgrgstay nrylgdpdnk pnpcvkpiet
      481 gpfyairvvl gdlgsfvghr tdasarvlte ggdvipglya vgndaaslfg gnysgggitl
      541 gpamtfgfia grhlagisda a
//
LOCUS       WP_258095509             374 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme [Salipiger
            pentaromativorans].
ACCESSION   WP_258095509
VERSION     WP_258095509.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..374
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /calculated_mol_wt=39691
     Region          24..370
                     /region_name="PucG"
                     /note="Archaeal aspartate aminotransferase or a related
                     aminotransferase, includes purine catabolism protein PucG
                     [Amino acid transport and metabolism, Nucleotide transport
                     and metabolism]; COG0075"
                     /db_xref="CDD:439845"
ORIGIN      
        1 mplrddvdpn gleefsvvft drslnhmsaa fqqvmrdisg mlrevygada valvpgggtf
       61 gmeavarqfg qgakalvvrn gwfsfrwsqi feaggfggev tvmkarqtgn eptapfapap
      121 ieevvetirr eapqivfaph vetsagvilp dayiaamaaa ahevgalmvl dciasgcvwv
      181 dmkdtgvdvl isapqkgwsa tpcaglvmls dramarmeet vsnsfamdlk kwqqimaaye
      241 agghayhatm ptdglrmfrd amvetqemgf daakaaqwel gekvrallaa rgissvaaqg
      301 fgapgvvvsy tadpelqsgr afaakgtqia agvplqcdep agfstfrlgl fgldklkdvd
      361 gtvarleavl dqvm
//
LOCUS       WP_258095673             831 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4214 domain-containing protein [Salipiger pentaromativorans].
ACCESSION   WP_258095673
VERSION     WP_258095673.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025314.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13946.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..831
                     /product="DUF4214 domain-containing protein"
                     /calculated_mol_wt=88893
     Region          19..264
                     /region_name="COG2931"
                     /note="Ca2+-binding protein, RTX toxin-related [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:442175"
     Region          152..187
                     /region_name="HemolysinCabind"
                     /note="RTX calcium-binding nonapeptide repeat (4 copies);
                     pfam00353"
                     /db_xref="CDD:459777"
     Region          <492..540
                     /region_name="DUF4214"
                     /note="Domain of unknown function (DUF4214); pfam13946"
                     /db_xref="CDD:433598"
     Region          528..593
                     /region_name="DUF4214"
                     /note="Domain of unknown function (DUF4214); pfam13946"
                     /db_xref="CDD:433598"
     Region          652..717
                     /region_name="DUF4214"
                     /note="Domain of unknown function (DUF4214); pfam13946"
                     /db_xref="CDD:433598"
ORIGIN      
        1 mlltyhgysg dflddafyns itdgfdsdvv snsatriell npstgytavl ygtgfnnpna
       61 plltgtvsri eiydptaqls tvlqniawgl qefasamgll mddgddsllm glldrddvtf
      121 datssviasq ahldnltsnl tffgsafgdv avggdgndsl ygnngndsle gglgddvlvg
      181 gndddllnpg dndygvdvvd pgtgfdivdt sdmergyvei vhrqladagi plyvqidgna
      241 nfgaivkgln gnfgvtsitn vmnaleadgl aifggngdde fqvtsrdggw msviggpgnd
      301 lfeigasygt vridfrfdhn gnyatqpvqv nlttgevand gfgftdtily ersydpetgt
      361 yympdrieir agnfsdtlig svadesfipl ggndlidgre gydrlrydqg gagsgvrvdl
      421 eagtatgiwn gvafsqsvag ienvrgtsgy gdilsgntav gewldgrggg gndylfgdgf
      481 eaayaldeaa avyrlyqatl drapdigghd nwterlvtgs hsllqvtsnf vasrefqnty
      541 galdnagfvt llynnvldrd pdatglanwv arldggmsra qvvlgfaqsq efisatqada
      601 nafanghsqa nwgddvfriy qatlardpdf ggfgnwtarl adgtpletav agfvnstefq
      661 ntygsldnag fvtllynnvl grdpdatgla nwvqrlddgm sraqvvlgfa qstefvnsta
      721 ddykawmrgl dhgygwaehd wlegwdgndv lagglysdvf yfasgdtgsh tvldleawdy
      781 vylenfgyai yddvtahlsq qgadavfsdq gvtitflntq tsemtddmfl f
//
LOCUS       WP_258095645             262 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Salipiger pentaromativorans].
ACCESSION   WP_258095645
VERSION     WP_258095645.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 262)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..262
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=28526
     Region          4..239
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Site            order(9,11,50,83..84,156,194)
                     /site_type="active"
                     /db_xref="CDD:277317"
     Site            order(9,11,50,83,156,194)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277317"
ORIGIN      
        1 mlkfvvlsdl hlvdegetsq gldtharlqr gieaintrha dadfcvlagd ladlghqgav
       61 apytrlkelv agltmpchit ignhdnrday vsifgedera etgfidkvid akgyrvilld
      121 saehgthegv ldaaqidwlt arlaeaadrp vvivlhhhan plhtrvdrii lrdadrflaa
      181 lkthgdirqv iaghvhytsc glwygipftt lagghynvtv pldpeakvdr lfgpaqfavv
      241 lgdegqtlvh fdnyldgnav ls
//
LOCUS       WP_258095709             457 aa            linear   BCT 02-MAR-2025
DEFINITION  trypsin-like peptidase domain-containing protein [Salipiger
            pentaromativorans].
ACCESSION   WP_258095709
VERSION     WP_258095709.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024758.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13365.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..457
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /calculated_mol_wt=47497
     Region          31..455
                     /region_name="degP_htrA_DO"
                     /note="periplasmic serine protease, Do/DeqQ family;
                     TIGR02037"
                     /db_xref="CDD:273938"
ORIGIN      
        1 mlriclvalt laatplaaqt rvpdsqaeis lsfaplvkaa tpavvniyar rvvearspfa
       61 gdplfgnlfr dfggrprvqn slgsgvilsd dgivvsnyhv vgqatdirvv lnngaeyeaq
      121 vllgdeeadl ailkldgaad mphlalrdsd tvevgelvla ignpfgvgqt vssgivsgla
      181 rsgtatgnar gyfiqtdapi npgnsggali dvkgrligvn tsiltrsggs ngigfaipsa
      241 lvsqfveqar agkadferpw agmtgqpvna diseslglgl pngvliadlh pqspfaragl
      301 evgdvvlevd gqpvntppem lfrmsvrglg hraqirylhd gtprqaevem iappetpprd
      361 avilgetavl pglalarinp avsaelglpl pgegivvtdp gpygariglr pgdvlraing
      421 rdiaapddvg rlleraaprv qidaqrgagr vslrfrt
//
LOCUS       WP_258095475             306 aa            linear   BCT 02-MAR-2025
DEFINITION  dihydroneopterin aldolase [Salipiger pentaromativorans].
ACCESSION   WP_258095475
VERSION     WP_258095475.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 306)
  AUTHORS   Haussmann,C., Rohdich,F., Schmidt,E., Bacher,A. and Richter,G.
  TITLE     Biosynthesis of pteridines in Escherichia coli. Structural and
            mechanistic similarity of dihydroneopterin-triphosphate epimerase
            and dihydroneopterin aldolase
  JOURNAL   J Biol Chem 273 (28), 17418-17424 (1998)
   PUBMED   9651328
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014233.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02152.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..306
                     /product="dihydroneopterin aldolase"
                     /EC_number="4.1.2.25"
                     /GO_function="GO:0004150 - dihydroneopterin aldolase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006760 - folic acid-containing compound
                     metabolic process [Evidence IEA]"
                     /calculated_mol_wt=33123
     Region          26..139
                     /region_name="FolB"
                     /note="Dihydroneopterin aldolase [Coenzyme transport and
                     metabolism]; COG1539"
                     /db_xref="CDD:441148"
     Region          <198..>286
                     /region_name="AAK"
                     /note="Amino Acid Kinases (AAK) superfamily, catalytic
                     domain; present in such enzymes like N-acetylglutamate
                     kinase (NAGK), carbamate kinase (CK), aspartokinase (AK),
                     glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK
                     superfamily includes kinases that...; cl00452"
                     /db_xref="CDD:444912"
ORIGIN      
        1 madeirlafa hpseraiate geaprdrisl rdhvreveig afqaerghtq rvrfdvvvev
       61 apagglpddd vdrilsydrv teaisaelaa ervnlletla eriaerille pqamrafvri
      121 ekldrgpgal gveivrtrrd fgahlnevaq trphprivyl snaaiasdav sgwidgfaaq
      181 saplilcvgl pdvarpqaah plaqrrvdll aieqngwvla ardprckvva trteldwamk
      241 ngqiciwaps kivldatqgp asqprdsval aswfaglmea celvvigetp padspvpsra
      301 vtvgns
//
LOCUS       WP_258095759             142 aa            linear   BCT 02-MAR-2025
DEFINITION  glyoxalase superfamily protein [Salipiger pentaromativorans].
ACCESSION   WP_258095759
VERSION     WP_258095759.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040431.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20066.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..142
                     /product="glyoxalase superfamily protein"
                     /calculated_mol_wt=15627
     Region          1..141
                     /region_name="Glyoxalase_8"
                     /note="Glyoxalase superfamily protein; pfam20066"
                     /db_xref="CDD:437898"
ORIGIN      
        1 mtparptlet vkaearllra emkaqgidig hgqaleeiar rhgardwnal ravlgdsppd
       61 gfvpggrvrg rylshpfeat vvsvemlrpg wyrlelsldv pvdvvassrf sslrkrirgt
      121 vgprghsrec tsdgrphlei dr
//
LOCUS       WP_258095745             311 aa            linear   BCT 02-MAR-2025
DEFINITION  iron chelate uptake ABC transporter family permease subunit
            [Salipiger pentaromativorans].
ACCESSION   WP_258095745
VERSION     WP_258095745.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 311)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013219.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01032.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..311
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /calculated_mol_wt=31973
     Region          1..302
                     /region_name="CeuB"
                     /note="ABC-type enterochelin transport system, permease
                     component [Inorganic ion transport and metabolism];
                     COG4606"
                     /db_xref="CDD:443656"
ORIGIN      
        1 mrrrllplva laglialsls lgaasfgdda gwllmvsrlp rtaaallaga glalagvvvq
       61 qvvqnrlvep sltgapeaam lgllavtlla pglavagkml iaataalagm agylalaarl
      121 predpmllpi vgmvyggilg aagvwgawat dlmqylgawr lgefsgvmmg ryewlwaiaa
      181 laallyviad ritllglgea qarslgldya qtralglvvv svitalvlvt vgafpfvglv
      241 apnlvarwrg dnlranlpli alggggllla advigrliry pfeipaatvv avfgagvflw
      301 llhaapgrrh g
//
LOCUS       WP_258095744             314 aa            linear   BCT 02-MAR-2025
DEFINITION  iron chelate uptake ABC transporter family permease subunit
            [Salipiger pentaromativorans].
ACCESSION   WP_258095744
VERSION     WP_258095744.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 314)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013219.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01032.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..314
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /calculated_mol_wt=32607
     Region          23..297
                     /region_name="CeuC"
                     /note="ABC-type enterochelin transport system, permease
                     component [Inorganic ion transport and metabolism];
                     COG4605"
                     /db_xref="CDD:443655"
ORIGIN      
        1 maerrvlwla lallalsaaf lawhlrapmg filglraakl galicvgaat gaatilfqtv
       61 aanrlltpgl vgfdalfilm qtllvlilgg vgaaqipggl rfafevlalg lasaalfgll
      121 lrrdardvtr miltgiilgv llrglsemvq rlmdpsdyav vqqamfasfg ridpqqlava
      181 avvllaalaa alrmapaldv aglgrgtarg lgldhdrlvl valllmaamv svstalvgpi
      241 tflglltasl arqltgthrh avllpaaall galilvagqf vferllgsps alavivelfg
      301 gllflalvlk rrrp
//
LOCUS       WP_258095773             187 aa            linear   BCT 02-MAR-2025
DEFINITION  maleylpyruvate isomerase N-terminal domain-containing protein
            [Salipiger pentaromativorans].
ACCESSION   WP_258095773
VERSION     WP_258095773.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023144.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11716.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..187
                     /product="maleylpyruvate isomerase N-terminal
                     domain-containing protein"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=20049
     Region          27..>183
                     /region_name="MDMPI_N"
                     /note="Mycothiol maleylpyruvate isomerase N-terminal
                     domain; cl21506"
                     /db_xref="CDD:473890"
ORIGIN      
        1 mstldearda lrqrqglgar ydapeapaqd lalarsgtay farklneldd aalyapsrva
       61 gmtrahvvca vsyqaraiar qaeaatagaq ipplrdpewd aledldlgat lppralrhlf
      121 dhsavhldvv wrdlpgagwd lmgagadgtp rplratamer agmlwqsale lgngarerdl
      181 ppvlrpv
//
LOCUS       WP_258095917             748 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Salipiger pentaromativorans].
ACCESSION   WP_258095917
VERSION     WP_258095917.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 748)
  AUTHORS   Clarke,T.A., Edwards,M.J., Gates,A.J., Hall,A., White,G.F.,
            Bradley,J., Reardon,C.L., Shi,L., Beliaev,A.S., Marshall,M.J.,
            Wang,Z., Watmough,N.J., Fredrickson,J.K., Zachara,J.M., Butt,J.N.
            and Richardson,D.J.
  TITLE     Structure of a bacterial cell surface decaheme electron conduit
  JOURNAL   Proc Natl Acad Sci U S A 108 (23), 9384-9389 (2011)
   PUBMED   21606337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037016.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17963.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..748
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=77058
     Region          55..138
                     /region_name="tand_rpt_95"
                     /note="tandem-95 repeat; NF012211"
                     /db_xref="CDD:333740"
     Region          115..206
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
     Region          223..313
                     /region_name="Cadherin_5"
                     /note="Cadherin-like domain; pfam17892"
                     /db_xref="CDD:436123"
     Region          <407..>468
                     /region_name="Peptidase_M10_C"
                     /note="Peptidase M10 serralysin C terminal; cl23859"
                     /db_xref="CDD:451582"
ORIGIN      
        1 meliaisall lfglllpssg ddgddndgrg tgddgapeaa ddtatteagt atlidilgnd
       61 tdpdgdmliv drlgdpengs ieltedglly qpnadfvgtd tfdyrvsdgn ggsdtatvtv
      121 nvtesdingd peaapdiast gvdealiiev lsndtdtdgd plvvesagpa gngtvevltd
      181 gtvlytpntg ysgsdsfsyt vsdgqggtdv etvtvtvgtg gpnvgpiand dslmlaetlp
      241 qsinvlandt dpdgdpltvq svgeaaqgtt alaengtity tpadnfhgtd sfsytvvdtq
      301 getatanvev dinlatdlsd nlvlgdgdnm vdalngndtv agqggndtif agvgydevtg
      361 gdgddfldgs snlaftldvv ngeisdaalr lilaeaevte efadvvddfa dtvdggpgnd
      421 tllaaegdil tggegsddfl lgaydlgenn sqqititdfv pgedqillve ylgaeeivie
      481 sqsydpetnt ttvqlssdgn qinlvlegld qplteddiah lnplnmqeqs itggtlenvt
      541 teipltqteg eialtdfpdd vinngtpevi rlgggddilv nfgdrapyda thilagdgdd
      601 mitdfggshi faedgndtis stattltldg gegddrlefh agqtvvggag sdvfsyqgrd
      661 gdadveiadf tsedqielpg gayavamqtp tefglridlm rtepgetgtl tillqefegl
      721 ltpdnfvgpp evgapvtfln tadgtpvs
//
LOCUS       WP_258095966             255 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaT-like ssDNA-binding domain-containing protein [Klebsiella
            pneumoniae].
ACCESSION   WP_258095966
VERSION     WP_258095966.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 255)
  AUTHORS   Fujiyama,S., Abe,Y., Tani,J., Urabe,M., Sato,K., Aramaki,T.,
            Katayama,T. and Ueda,T.
  TITLE     Structure and mechanism of the primosome protein DnaT-functional
            structures for homotrimerization, dissociation of ssDNA from the
            PriB.ssDNA complex, and formation of the DnaT.ssDNA complex
  JOURNAL   FEBS J 281 (23), 5356-5370 (2014)
   PUBMED   25265331
REFERENCE   2  (residues 1 to 255)
  AUTHORS   Liu,Z., Chen,P., Wang,X., Cai,G., Niu,L., Teng,M. and Li,X.
  TITLE     Crystal structure of DnaT84-153-dT10 ssDNA complex reveals a novel
            single-stranded DNA binding mode
  JOURNAL   Nucleic Acids Res 42 (14), 9470-9483 (2014)
   PUBMED   25053836
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037684.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17948.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..255
                     /product="DnaT-like ssDNA-binding domain-containing
                     protein"
                     /calculated_mol_wt=28754
     Region          <144..252
                     /region_name="DnaT"
                     /note="DnaT DNA-binding domain; cl46275"
                     /db_xref="CDD:480615"
ORIGIN      
        1 marirtikpe fwtdedmaev sepacllaig llnyaddegy fnanpklika avfpirepsv
       61 pipvlirels ncgylsmfst pdgkhfgvit nflkhqvvnk pkeskikglp lvpyeygtdt
      121 vqvplgmdqg sgireiktpl sareviqvpp vvvdgigepi gkftmhenwk psedfvmrar
      181 twghalpadg ykksdliefi tywmaegnvm qhvqweqkfa rllmnrkkra agkrgessde
      241 evphwnspeg wkdfl
//
LOCUS       WP_258095968             273 aa            linear   BCT 02-MAR-2025
DEFINITION  PD-(D/E)XK nuclease-like domain-containing protein [Klebsiella
            pneumoniae].
ACCESSION   WP_258095968
VERSION     WP_258095968.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024096.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12684.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..273
                     /product="PD-(D/E)XK nuclease-like domain-containing
                     protein"
                     /calculated_mol_wt=31367
     Region          <1..267
                     /region_name="PRK09709"
                     /note="exodeoxyribonuclease VIII"
                     /db_xref="CDD:236615"
ORIGIN      
        1 mtpgiyfdis nedyhagdgv sksqldmval spallqwqks apvdteklka ldmgtalhcl
       61 llepeefdkr fivapqfnlr tnqgkadqea flkdvenmgm tvmdaeqgrk lklmrdsama
      121 hpaarwllea egfceashyw tdpetgelcr irpdkrlknh pvlldvkkva dmerfsrhie
      181 efryhvqdam yregaqqttg dphgffflav setidcgryq vrvfeldaqd vdtghalyrr
      241 dlntyhqcre tgdwggfevi krpewarkqd myv
//
LOCUS       WP_258096128             369 aa            linear   BCT 02-MAR-2025
DEFINITION  endonuclease/exonuclease/phosphatase family protein [Salinibacter
            sp. 10B].
ACCESSION   WP_258096128
VERSION     WP_258096128.1
KEYWORDS    RefSeq.
SOURCE      Salinibacter sp. 10B
  ORGANISM  Salinibacter sp. 10B
            Bacteria; Pseudomonadati; Rhodothermota; Rhodothermia;
            Rhodothermales; Salinibacteraceae; Salinibacter.
REFERENCE   1  (residues 1 to 369)
  AUTHORS   Dlakic,M.
  TITLE     Functionally unrelated signalling proteins contain a fold similar
            to Mg2+-dependent endonucleases
  JOURNAL   Trends Biochem Sci 25 (6), 272-273 (2000)
   PUBMED   10838565
REFERENCE   2  (residues 1 to 369)
  AUTHORS   Mol,C.D., Kuo,C.F., Thayer,M.M., Cunningham,R.P. and Tainer,J.A.
  TITLE     Structure and function of the multifunctional DNA-repair enzyme
            exonuclease III
  JOURNAL   Nature 374 (6520), 381-386 (1995)
   PUBMED   7885481
REFERENCE   3  (residues 1 to 369)
  AUTHORS   Lahm,A. and Suck,D.
  TITLE     DNase I-induced DNA conformation. 2 A structure of a DNase
            I-octamer complex
  JOURNAL   J Mol Biol 222 (3), 645-667 (1991)
   PUBMED   1748997
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015338.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03372.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Salinibacter sp. 10B"
                     /db_xref="taxon:1923971"
     Protein         1..369
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=41538
     Region          107..364
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(111,141,230,290,292,332,358..359)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     Site            order(141,358)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:197306"
     Site            order(230,292,359)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197306"
ORIGIN      
        1 miflrrtlra lgwglsivli aaflvgyaap ylsptsfwwt dlfavgvpal svligplsll
       61 mcgwgwyhrt rgrlllgigl lvllllrfgp rlvawtases eptalrimtf nvprafaqtn
      121 sgtamarfvr deapgvlafq ethlhttrhs pvalrrvspt iqgilddsig yelpllphst
      181 tlqqpvlgri pldsmsvhpl ppdgkqnars rytrttftwr grsavlynvh lhsvgearpw
      241 tllpeewtsw srwntflrty regalrraqq arllrrriar esrpvlivgd fnstphqway
      301 qhlaeglqna ilrrvrgwga tfpaqrplvq idhilagpaw qitaahippp tpqsplsdhr
      361 pvvahlqwk
//
LOCUS       WP_258096154             165 aa            linear   BCT 02-MAR-2025
DEFINITION  LPS assembly lipoprotein LptE [Salinibacter sp. 10B].
ACCESSION   WP_258096154
VERSION     WP_258096154.1
KEYWORDS    RefSeq.
SOURCE      Salinibacter sp. 10B
  ORGANISM  Salinibacter sp. 10B
            Bacteria; Pseudomonadati; Rhodothermota; Rhodothermia;
            Rhodothermales; Salinibacteraceae; Salinibacter.
REFERENCE   1  (residues 1 to 165)
  AUTHORS   Sperandeo,P., Lau,F.K., Carpentieri,A., De Castro,C., Molinaro,A.,
            Deho,G., Silhavy,T.J. and Polissi,A.
  TITLE     Functional analysis of the protein machinery required for transport
            of lipopolysaccharide to the outer membrane of Escherichia coli
  JOURNAL   J Bacteriol 190 (13), 4460-4469 (2008)
   PUBMED   18424520
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016290.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04390.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Salinibacter sp. 10B"
                     /db_xref="taxon:1923971"
     gene            1..165
                     /gene="lptE"
     Protein         1..165
                     /product="LPS assembly lipoprotein LptE"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /GO_process="GO:0043165 - Gram-negative-bacterium-type
                     cell outer membrane assembly [Evidence IEA]"
                     /calculated_mol_wt=17401
ORIGIN      
        1 mgvllclgag gvtgcayygf tgasipshle tiaipiaedn tsspvtnlgn qltdllteqf
       61 vgrtslslnn netdadavls trivqytnqp tgvsgderat qnrvsievdv ryydqvtdst
      121 mvqqtftgta nynpvqaglg geqqaaelav ervaedifts atsdw
//
LOCUS       WP_258096174             493 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding domain-containing protein [Salinibacter sp. 10B].
ACCESSION   WP_258096174
VERSION     WP_258096174.1
KEYWORDS    RefSeq.
SOURCE      Salinibacter sp. 10B
  ORGANISM  Salinibacter sp. 10B
            Bacteria; Pseudomonadati; Rhodothermota; Rhodothermia;
            Rhodothermales; Salinibacteraceae; Salinibacter.
REFERENCE   1  (residues 1 to 493)
  AUTHORS   Mees,A., Klar,T., Gnau,P., Hennecke,U., Eker,A.P., Carell,T. and
            Essen,L.O.
  TITLE     Crystal structure of a photolyase bound to a CPD-like DNA lesion
            after in situ repair
  JOURNAL   Science 306 (5702), 1789-1793 (2004)
   PUBMED   15576622
REFERENCE   2  (residues 1 to 493)
  AUTHORS   Tamada,T., Kitadokoro,K., Higuchi,Y., Inaka,K., Yasui,A., de
            Ruiter,P.E., Eker,A.P. and Miki,K.
  TITLE     Crystal structure of DNA photolyase from Anacystis nidulans
  JOURNAL   Nat Struct Biol 4 (11), 887-891 (1997)
   PUBMED   9360600
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015406.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03441.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Salinibacter sp. 10B"
                     /db_xref="taxon:1923971"
     Protein         1..493
                     /product="FAD-binding domain-containing protein"
                     /calculated_mol_wt=57204
     Region          4..467
                     /region_name="PhrB"
                     /note="Deoxyribodipyrimidine photolyase [Replication,
                     recombination and repair]; COG0415"
                     /db_xref="CDD:440184"
ORIGIN      
        1 mpdpvqvvwy krdlrvddhr plaraaergp vlplyvaeps itaaddyrsr hwtlireali
       61 elrarlakrg qplvvrcgem pevlealrrq vgplrlwahe evgngrtfer drrvrawaee
      121 qgirfteipc rgvvrgphdr ddwanhwena mrrplvyppd altpvdgiep gpmpshaelg
      181 lrpsttalqr igeaeahrtl daflrkrgqn yrramssplt geracsrmsv hlafgtislr
      241 rvvyelrqrr aelderrdpa atdwrqalds fdsrlhwhsh ftqkledapr iehesyipaf
      301 dalrkndwds alyeqwlhgr tgfpmvdacm rclrttgwln frmramlcsf aaydcwldwr
      361 rfaptygglm adyvpgihyp qvqmqsgttg inqiriynpv kqgkehdpeg tfirrwvpel
      421 shletdayvh epwqmspieq qavgcvigdd ypervvdhle ayhhaqetir sfrerpeiqt
      481 qaetilerhg srg
//
LOCUS       WP_258096210              89 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Klebsiella pneumoniae].
ACCESSION   WP_258096210
VERSION     WP_258096210.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 89)
  AUTHORS   Davies,D.R., Mahnke Braam,L., Reznikoff,W.S. and Rayment,I.
  TITLE     The three-dimensional structure of a Tn5 transposase-related
            protein determined to 2.9-A resolution
  JOURNAL   J Biol Chem 274 (17), 11904-11913 (1999)
   PUBMED   10207011
REFERENCE   2  (residues 1 to 89)
  AUTHORS   DasSarma,S.
  TITLE     Identification and analysis of the gas vesicle gene cluster on an
            unstable plasmid of Halobacterium halobium
  JOURNAL   Experientia 49 (6-7), 482-486 (1993)
   PUBMED   8335077
REFERENCE   3  (residues 1 to 89)
  AUTHORS   Ferrante,A.A. and Lessie,T.G.
  TITLE     Nucleotide sequence of IS402 from Pseudomonas cepacia
  JOURNAL   Gene 102 (1), 143-144 (1991)
   PUBMED   1650732
REFERENCE   4  (residues 1 to 89)
  AUTHORS   De Meirsman,C., Van Soom,C., Verreth,C., Van Gool,A. and
            Vanderleyden,J.
  TITLE     Nucleotide sequence analysis of IS427 and its target sites in
            Agrobacterium tumefaciens T37
  JOURNAL   Plasmid 24 (3), 227-234 (1990)
   PUBMED   1963949
REFERENCE   5  (residues 1 to 89)
  AUTHORS   Sato,S., Nakada,Y. and Shiratsuchi,A.
  TITLE     IS421, a new insertion sequence in Escherichia coli
  JOURNAL   FEBS Lett 249 (1), 21-26 (1989)
   PUBMED   2542093
REFERENCE   6  (residues 1 to 89)
  AUTHORS   Kroger,M. and Hobom,G.
  TITLE     Structural analysis of insertion sequence IS5
  JOURNAL   Nature 297 (5862), 159-162 (1982)
   PUBMED   6281654
REFERENCE   7  (residues 1 to 89)
  AUTHORS   Klaer,R., Kuhn,S., Tillmann,E., Fritz,H.J. and Starlinger,P.
  TITLE     The sequence of IS4
  JOURNAL   Mol Gen Genet 181 (2), 169-175 (1981)
   PUBMED   6268937
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01609.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..89
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <1..85
                     /region_name="IS5"
                     /note="Transposase and inactivated derivatives, IS5 family
                     [Mobilome: prophages, transposons]; COG3039"
                     /db_xref="CDD:442273"
ORIGIN      
        1 dwliaerpgr vktlkqhprk nktainieym kasirarveh pfriikrqfg fvkaryrgll
       61 kndnqlamlf tlanlfrvdq mirqwersq
//
LOCUS       WP_258096267             163 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent monooxygenase, partial [Klebsiella pneumoniae].
ACCESSION   WP_258096267
VERSION     WP_258096267.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 163)
  AUTHORS   Schreuder,H.A., van der Laan,J.M., Swarte,M.B., Kalk,K.H., Hol,W.G.
            and Drenth,J.
  TITLE     Crystal structure of the reduced form of p-hydroxybenzoate
            hydroxylase refined at 2.3 A resolution
  JOURNAL   Proteins 14 (2), 178-190 (1992)
   PUBMED   1409567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01494.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>163
                     /product="FAD-dependent monooxygenase"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
     Region          <2..150
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 vfrdafagwr wdwidipali dgaeaiyefp mvdkdplprw tfgrvtllgd aahpmypigs
       61 ngsaqaivda ryltdcllae rdpdyalrey eaerlprtag ivlrnrmngp eqvmqlaeer
      121 apqgfsdidt viplrereai arryktlagf gqqqlqasqp qas
//
LOCUS       WP_258096304             144 aa            linear   BCT 02-MAR-2025
DEFINITION  ShlB/FhaC/HecB family hemolysin secretion/activation protein,
            partial [Klebsiella pneumoniae].
ACCESSION   WP_258096304
VERSION     WP_258096304.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 144)
  AUTHORS   Desvaux,M., Parham,N.J. and Henderson,I.R.
  TITLE     Type V protein secretion: simplicity gone awry?
  JOURNAL   Curr Issues Mol Biol 6 (2), 111-124 (2004)
   PUBMED   15119822
REFERENCE   2  (residues 1 to 144)
  AUTHORS   Walker,G., Hertle,R. and Braun,V.
  TITLE     Activation of Serratia marcescens hemolysin through a
            conformational change
  JOURNAL   Infect Immun 72 (1), 611-614 (2004)
   PUBMED   14688146
REFERENCE   3  (residues 1 to 144)
  AUTHORS   Jacob-Dubuisson,F., Locht,C. and Antoine,R.
  TITLE     Two-partner secretion in Gram-negative bacteria: a thrifty,
            specific pathway for large virulence proteins
  JOURNAL   Mol Microbiol 40 (2), 306-313 (2001)
   PUBMED   11309114
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015803.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03865.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>144
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
     Region          <1..>144
                     /region_name="FhaC"
                     /note="Hemolysin activation/secretion protein
                     [Intracellular trafficking, secretion, and vesicular
                     transport]; COG2831"
                     /db_xref="CDD:442079"
ORIGIN      
        1 tpnrqvvpmv rpgslpqtvd velkvedhnp lggsvslnnd hsvdthalra satlshdnlw
       61 qrghqasvtf fgapqalsea rvwsfsylap frnspfsvqa tgytsdsnva tvggtsvlgn
      121 gyavglqgny alpqtgdwtg svgl
//
LOCUS       WP_258095674             243 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfotransferase family 2 domain-containing protein [Salipiger
            pentaromativorans].
ACCESSION   WP_258095674
VERSION     WP_258095674.1
KEYWORDS    RefSeq.
SOURCE      Salipiger pentaromativorans
  ORGANISM  Salipiger pentaromativorans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (residues 1 to 243)
  AUTHORS   Habuchi,H., Miyake,G., Nogami,K., Kuroiwa,A., Matsuda,Y.,
            Kusche-Gullberg,M., Habuchi,O., Tanaka,M. and Kimata,K.
  TITLE     Biosynthesis of heparan sulphate with diverse structures and
            functions: two alternatively spliced forms of human heparan
            sulphate 6-O-sulphotransferase-2 having different expression
            patterns and properties
  JOURNAL   Biochem J 371 (Pt 1), 131-142 (2003)
   PUBMED   12492399
REFERENCE   2  (residues 1 to 243)
  AUTHORS   Li,J., Shworak,N.W. and Simons,M.
  TITLE     Increased responsiveness of hypoxic endothelial cells to FGF2 is
            mediated by HIF-1alpha-dependent regulation of enzymes involved in
            synthesis of heparan sulfate FGF2-binding sites
  JOURNAL   J Cell Sci 115 (Pt 9), 1951-1959 (2002)
   PUBMED   11956326
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015527.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03567.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Salipiger pentaromativorans"
                     /db_xref="taxon:2943193"
     Protein         1..243
                     /product="sulfotransferase family 2 domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=28135
ORIGIN      
        1 mrialfhipk tggtslhdfl ishypedric perfknfdrf tpaqlreydy vsahmdygil
       61 rrlpgpfyti tilrepkari lslyyfwrsh tdetieklnl vgprlakkls lleflrtnth
      121 gipsninnly vrsllgsswt gpngrlvlqd dealrvamrn llsidtvgfv edmprlfqev
      181 tqrtgfampe elpwarsarn fgsekgsekv areeitpeid arldhltrld rilydnaral
      241 flr
//
LOCUS       WP_258096312             142 aa            linear   BCT 02-MAR-2025
DEFINITION  molybdopterin cofactor-binding domain-containing protein, partial
            [Klebsiella pneumoniae].
ACCESSION   WP_258096312
VERSION     WP_258096312.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 142)
  AUTHORS   Dobbek,H., Gremer,L., Meyer,O. and Huber,R.
  TITLE     Crystal structure and mechanism of CO dehydrogenase, a molybdo
            iron-sulfur flavoprotein containing S-selanylcysteine
  JOURNAL   Proc Natl Acad Sci U S A 96 (16), 8884-8889 (1999)
   PUBMED   10430865
REFERENCE   2  (residues 1 to 142)
  AUTHORS   Romao,M.J., Archer,M., Moura,I., Moura,J.J., LeGall,J., Engh,R.,
            Schneider,M., Hof,P. and Huber,R.
  TITLE     Crystal structure of the xanthine oxidase-related aldehyde
            oxido-reductase from D. gigas
  JOURNAL   Science 270 (5239), 1170-1176 (1995)
   PUBMED   7502041
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042649.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20256.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>142
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
     Region          <1..>142
                     /region_name="peri_hyde_PaoC"
                     /note="aldehyde oxidoreductase molybdenum-binding subunit
                     PaoC; NF041671"
                     /db_xref="CDD:469553"
ORIGIN      
        1 maleiaidem agklgmdpvq frilndtqvd pekperpfsq rrfveclrlg aehfgwnrrn
       61 pkpgsmregq wligmgvasa frnnlltksg arvaidagga vvvetdmtdi gtgsytiiaq
      121 taaemmgvpl drvvvrlgds nf
//
LOCUS       WP_258096332             134 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome ubiquinol oxidase subunit I, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_258096332
VERSION     WP_258096332.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 134)
  AUTHORS   Juty,N.S., Moshiri,F., Merrick,M., Anthony,C. and Hill,S.
  TITLE     The Klebsiella pneumoniae cytochrome bd' terminal oxidase complex
            and its role in microaerobic nitrogen fixation
  JOURNAL   Microbiology (Reading) 143 (Pt 8), 2673-2683 (1997)
   PUBMED   9274021
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013791.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01654.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>134
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /EC_number="1.10.3.-"
                     /GO_component="GO:0070069 - cytochrome complex [Evidence
                     IEA]"
                     /GO_function="GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /GO_process="GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
     Region          <1..>134
                     /region_name="Cyt_bd_oxida_I"
                     /note="Cytochrome bd terminal oxidase subunit I; cl00562"
                     /db_xref="CDD:469822"
ORIGIN      
        1 tllvaggttl safwilalns wmqtpagfem idgrahvvsw lavifnpsfp yrlvhmllas
       61 gltiafllag isayrwlrhd rsrevmhslr tgvmlaamli plqivagdlh glntlhhqpa
      121 kiaamegiwk tekg
//
LOCUS       WP_258096362             127 aa            linear   BCT 02-MAR-2025
DEFINITION  4Fe-4S dicluster domain-containing protein, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_258096362
VERSION     WP_258096362.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024644.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13247.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>127
                     /product="4Fe-4S dicluster domain-containing protein"
     Region          1..>127
                     /region_name="DMSOR_beta-like"
                     /note="Beta subunit of the DMSO Reductase (DMSOR) family;
                     cl25360"
                     /db_xref="CDD:355383"
ORIGIN      
        1 vgvnvgiydn padldehtwt lmrfteyenq ngnlewlirk dgcmhcedpg clkacpapga
       61 ivqyangivd fheencigcg ycitgcpfni prisktdhka ykctlcsdrv avgqepacvk
      121 tcptgai
//
LOCUS       WP_258096425              79 aa            linear   BCT 02-MAR-2025
DEFINITION  HeH/LEM domain-containing protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_258096425
VERSION     WP_258096425.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 79)
  AUTHORS   Hirano,Y., Kinugasa,Y., Asakawa,H., Chikashige,Y., Obuse,C.,
            Haraguchi,T. and Hiraoka,Y.
  TITLE     Lem2 is retained at the nuclear envelope through its interaction
            with Bqt4 in fission yeast
  JOURNAL   Genes Cells 23 (3), 122-135 (2018)
   PUBMED   29292846
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024351.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12949.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..79
                     /product="HeH/LEM domain-containing protein"
     Region          37..66
                     /region_name="HeH"
                     /note="HeH/LEM domain; pfam12949"
                     /db_xref="CDD:403988"
ORIGIN      
        1 edqgdfvlin eedfdpnvhk rydegakkaa tqpkasvdel raaltakgie ipegakkadl
       61 qalldkadae gasdgdnqg
//
LOCUS       WP_258096530              80 aa            linear   BCT 02-MAR-2025
DEFINITION  TatD family hydrolase, partial [Klebsiella pneumoniae].
ACCESSION   WP_258096530
VERSION     WP_258096530.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 80)
  AUTHORS   Wexler,M., Sargent,F., Jack,R.L., Stanley,N.R., Bogsch,E.G.,
            Robinson,C., Berks,B.C. and Palmer,T.
  TITLE     TatD is a cytoplasmic protein with DNase activity. No requirement
            for TatD family proteins in sec-independent protein export
  JOURNAL   J Biol Chem 275 (22), 16717-16722 (2000)
   PUBMED   10747959
REFERENCE   2  (residues 1 to 80)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013213.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01026.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>80
                     /product="TatD family hydrolase"
                     /GO_function="GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
     Region          6..>80
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
ORIGIN      
        1 mgairfdigv kltssqfsra heevvarala agvhphdgss wtpavaeaiy tlagepqvva
       61 igecgldfnr nfstpheqev
//
LOCUS       WP_258096553              95 aa            linear   BCT 02-MAR-2025
DEFINITION  PTS transporter subunit EIIC, partial [Klebsiella pneumoniae].
ACCESSION   WP_258096553
VERSION     WP_258096553.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 95)
  AUTHORS   Reizer,J., Paulsen,I.T., Reizer,A., Titgemeyer,F. and Saier,M.H.
            Jr.
  TITLE     Novel phosphotransferase system genes revealed by bacterial genome
            analysis: the complete complement of pts genes in mycoplasma
            genitalium
  JOURNAL   Microb Comp Genomics 1 (3), 151-164 (1996)
   PUBMED   9689210
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02378.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>95
                     /product="PTS transporter subunit EIIC"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
     Region          <1..93
                     /region_name="CelB"
                     /note="Phosphotransferase system cellobiose-specific
                     component IIC [Carbohydrate transport and metabolism];
                     COG1455"
                     /db_xref="CDD:441064"
ORIGIN      
        1 sahlrssgrv svvpslfnin epvifgtpiv mnpvffipvl lapmvnavla waamkldlig
       61 rvisvgpwta papiggawal gwdfraailv ivlac
//
LOCUS       WP_258096558              95 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Klebsiella pneumoniae].
ACCESSION   WP_258096558
VERSION     WP_258096558.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 95)
  AUTHORS   Davies,D.R., Mahnke Braam,L., Reznikoff,W.S. and Rayment,I.
  TITLE     The three-dimensional structure of a Tn5 transposase-related
            protein determined to 2.9-A resolution
  JOURNAL   J Biol Chem 274 (17), 11904-11913 (1999)
   PUBMED   10207011
REFERENCE   2  (residues 1 to 95)
  AUTHORS   DasSarma,S.
  TITLE     Identification and analysis of the gas vesicle gene cluster on an
            unstable plasmid of Halobacterium halobium
  JOURNAL   Experientia 49 (6-7), 482-486 (1993)
   PUBMED   8335077
REFERENCE   3  (residues 1 to 95)
  AUTHORS   Ferrante,A.A. and Lessie,T.G.
  TITLE     Nucleotide sequence of IS402 from Pseudomonas cepacia
  JOURNAL   Gene 102 (1), 143-144 (1991)
   PUBMED   1650732
REFERENCE   4  (residues 1 to 95)
  AUTHORS   De Meirsman,C., Van Soom,C., Verreth,C., Van Gool,A. and
            Vanderleyden,J.
  TITLE     Nucleotide sequence analysis of IS427 and its target sites in
            Agrobacterium tumefaciens T37
  JOURNAL   Plasmid 24 (3), 227-234 (1990)
   PUBMED   1963949
REFERENCE   5  (residues 1 to 95)
  AUTHORS   Sato,S., Nakada,Y. and Shiratsuchi,A.
  TITLE     IS421, a new insertion sequence in Escherichia coli
  JOURNAL   FEBS Lett 249 (1), 21-26 (1989)
   PUBMED   2542093
REFERENCE   6  (residues 1 to 95)
  AUTHORS   Kroger,M. and Hobom,G.
  TITLE     Structural analysis of insertion sequence IS5
  JOURNAL   Nature 297 (5862), 159-162 (1982)
   PUBMED   6281654
REFERENCE   7  (residues 1 to 95)
  AUTHORS   Klaer,R., Kuhn,S., Tillmann,E., Fritz,H.J. and Starlinger,P.
  TITLE     The sequence of IS4
  JOURNAL   Mol Gen Genet 181 (2), 169-175 (1981)
   PUBMED   6268937
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01609.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>95
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          <1..>95
                     /region_name="transpos_IS4_3"
                     /note="IS4 family transposase; NF033590"
                     /db_xref="CDD:468099"
ORIGIN      
        1 gnitlnavla eecnppkget plkwllltse pveslaqalr vidiynhrwr ieefhkawkt
       61 vagaerqrme epdnlerlvs ilsfvafrll qlres
//
LOCUS       WP_258096577              94 aa            linear   BCT 02-MAR-2025
DEFINITION  ROK family protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_258096577
VERSION     WP_258096577.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>94
                     /product="ROK family protein"
     Region          <1..94
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 iktickaank gdalacevie ymgrhlgkti aiainlfnpq kivvageivv aekvllpgie
       61 gcinaqalna frnnlpvvrs tldhrsaiga falv
//
LOCUS       WP_258096664             190 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein, partial
            [Salinibacter sp. 10B].
ACCESSION   WP_258096664
VERSION     WP_258096664.1
KEYWORDS    RefSeq.
SOURCE      Salinibacter sp. 10B
  ORGANISM  Salinibacter sp. 10B
            Bacteria; Pseudomonadati; Rhodothermota; Rhodothermia;
            Rhodothermales; Salinibacteraceae; Salinibacter.
REFERENCE   1  (residues 1 to 190)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Salinibacter sp. 10B"
                     /db_xref="taxon:1923971"
     Protein         1..>190
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
     Region          3..>190
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(8,10..11,13,34..36,76..78,116..118,143,147,170..173)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(95,118,143,147)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 msrilvtgan gqigselvaa lrerhgarqv vgldlkpppa sngqpregpf eeadvrdraa
       61 laevisaydv gtvyhlasll satgeqqpdr twevnmgglk nvldlargeg lrvfwpssia
      121 vfgpstpken tpqqtvldpt tiygvtkrsg ellcryyhrr fgvdvrslry pglisyktap
      181 gggttdyave
//
LOCUS       WP_258096667              85 aa            linear   BCT 02-MAR-2025
DEFINITION  glutathione S-transferase C-terminal domain-containing protein,
            partial [Klebsiella pneumoniae].
ACCESSION   WP_258096667
VERSION     WP_258096667.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024802.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13410.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..85
                     /product="glutathione S-transferase C-terminal
                     domain-containing protein"
     Region          <2..81
                     /region_name="GST_C_family"
                     /note="C-terminal, alpha helical domain of the Glutathione
                     S-transferase family; cl02776"
                     /db_xref="CDD:470672"
ORIGIN      
        1 gvaawarhwv dmgfcaieer laarrtgrfv vgdvptgadi ylfpqaigag rmgfdvaqrw
       61 phiaaivaal hdvpafalna paprt
//
LOCUS       WP_258096722              87 aa            linear   BCT 02-MAR-2025
DEFINITION  arginase family protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_258096722
VERSION     WP_258096722.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00491.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         <1..>87
                     /product="arginase family protein"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
     Region          1..>87
                     /region_name="Arginase_HDAC"
                     /note="Arginase-like and histone-like hydrolases; cl17011"
                     /db_xref="CDD:450134"
ORIGIN      
        1 yesdadwvit gvpfdlatsg raggrhgpaa irqvstnlaw ehnrvpwnfd mrerlnvvdc
       61 gdlvyafgea remseklqah aekllaa
//
LOCUS       WP_258096421             182 aa            linear   BCT 02-MAR-2025
DEFINITION  metal-dependent hydrolase [Salinibacter sp. 10B].
ACCESSION   WP_258096421
VERSION     WP_258096421.1
KEYWORDS    RefSeq.
SOURCE      Salinibacter sp. 10B
  ORGANISM  Salinibacter sp. 10B
            Bacteria; Pseudomonadati; Rhodothermota; Rhodothermia;
            Rhodothermales; Salinibacteraceae; Salinibacter.
REFERENCE   1  (residues 1 to 182)
  AUTHORS   Zhang,Y. and Lin,K.
  TITLE     A phylogenomic analysis of Escherichia coli / Shigella group:
            implications of genomic features associated with pathogenicity and
            ecological adaptation
  JOURNAL   BMC Evol Biol 12, 174 (2012)
   PUBMED   22958895
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 182)
  AUTHORS   Fernandez De Henestrosa,A.R., Ogi,T., Aoyagi,S., Chafin,D.,
            Hayes,J.J., Ohmori,H. and Woodgate,R.
  TITLE     Identification of additional genes belonging to the LexA regulon in
            Escherichia coli
  JOURNAL   Mol Microbiol 35 (6), 1560-1572 (2000)
   PUBMED   10760155
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016214.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04307.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Salinibacter sp. 10B"
                     /db_xref="taxon:1923971"
     Protein         1..182
                     /product="metal-dependent hydrolase"
                     /calculated_mol_wt=20486
     Region          <129..>182
                     /region_name="YdjM"
                     /note="LexA-binding, inner membrane-associated putative
                     hydrolase; cl00868"
                     /db_xref="CDD:469964"
ORIGIN      
        1 masrvprarw rlldhsylyi vtafmagykg hlagatlfai gylaalgyaf sidiayrqyt
       61 aleqvgypla lvvltllfgl wpdvdtnskg qqifytiffv tdvflivter fraaaylglv
      121 allpvlsrhr gwthtwwaml lvpspflilp ylhmperpli glpfygaavt gylshlvidw
      181 it
//
LOCUS       WP_258096727              67 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein, partial [Klebsiella pneumoniae].
ACCESSION   WP_258096727
VERSION     WP_258096727.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 67)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     Protein         1..>67
                     /product="EAL domain-containing protein"
     Region          <1..>67
                     /region_name="YjcC"
                     /note="Redox-sensing c-di-GMP phosphodiesterase, contains
                     CSS-motif and EAL domains [Signal transduction
                     mechanisms]; COG4943"
                     /db_xref="CDD:443970"
ORIGIN      
        1 mlqdairrke vfavyqpvma lddgrcvgae alvrwrlpdg sivlpdrfip maeevgaiha
       61 itrcmid
//
LOCUS       WP_258096885             302 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Klebsiella
            quasipneumoniae].
ACCESSION   WP_258096885
VERSION     WP_258096885.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..302
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=34797
     Region          9..280
                     /region_name="PRK15121"
                     /note="MDR efflux pump AcrAB transcriptional activator
                     RobA"
                     /db_xref="CDD:185076"
ORIGIN      
        1 mkqklylkml awledniycn paiddlaqym gysrrfvyev fyqygrlpig qyirlrrlti
       61 aavslrltrq piaaiawqls ydspqtfsre fkkrfslspr eyrcaahwdt akllkkfspd
      121 derlplaric slpervyygy pmkyelrlsd mvlqrtakta irqkvdrfft agegslsils
      181 dyaaarqnel nveinafvgc hearkpsstl tarsglyvgv dfygswsrya rlsrdlyldl
      241 lptlgvsrrd gydiecfmar hteggdteer cyhvryfipv tlkaaaqqpg sdnesvparg
      301 ae
//
LOCUS       WP_258097006             254 aa            linear   BCT 02-MAR-2025
DEFINITION  outer membrane beta-barrel protein [Klebsiella quasipneumoniae].
ACCESSION   WP_258097006
VERSION     WP_258097006.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10082.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..254
                     /product="outer membrane beta-barrel protein"
                     /calculated_mol_wt=30052
     Region          <50..225
                     /region_name="COG5338"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:444122"
ORIGIN      
        1 mevallrkql rfrdldsika asddfdyymh dqewnenslv aelfdqkakt lryrysfitn
       61 qrryelnplk dsneyyllfg mknrlsgkte ingnvawlyk dfihnpdsqg fnglnwdita
      121 dwkpleqmkf nlhssqrikd ptdsggyilv snfgvgyehh wlvdrfstlv dysyitedyk
      181 hqsnkrkdqs nllsltfnyd frpsinfklk lqwntmhsnk dtdtfyigpd yshavdrtlg
      241 yddsaiifmt qvqi
//
LOCUS       WP_258096933             103 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR family transcriptional regulator [Vibrio chagasii].
ACCESSION   WP_258096933
VERSION     WP_258096933.1
KEYWORDS    RefSeq.
SOURCE      Vibrio chagasii
  ORGANISM  Vibrio chagasii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 103)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012354.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00126.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Vibrio chagasii"
                     /db_xref="taxon:170679"
     Protein         1..103
                     /product="LysR family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=11867
     Region          3..>100
                     /region_name="leuO"
                     /note="leucine transcriptional activator; Reviewed;
                     PRK09508"
                     /db_xref="CDD:181918"
ORIGIN      
        1 mentdfslip yfvvmmedls isntakrfgv sqpavskals rlketyddpl fvktkdgyrp
       61 srfcydiypq ikqaydafes tfpnkrkfdp skidrsfnva cir
//
LOCUS       WP_258097114            1000 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Marinoscillum pacificum].
ACCESSION   WP_258097114
VERSION     WP_258097114.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024824.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13432.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..1000
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=115306
     Region          15..684
                     /region_name="PEP_TPR_lipo"
                     /note="putative PEP-CTERM system TPR-repeat lipoprotein;
                     TIGR02917"
                     /db_xref="CDD:274350"
     Site            order(102..103,106..107,109,136,139..140,143..144,
                     146..147,171,174..175,178..179,182)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          102..126
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          134..164
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          170..194
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(242,245..246,249..250,252,277,280..281,284..285,
                     287..288,312,315..316,319..320,323)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          242..269
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          275..306
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          311..339
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          347..376
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          390..417
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          424..451
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          460..488
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(461,464..465,468..469,471,497,500..501,504..505,
                     507..508,535,538..539,542..543,546)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          493..529
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          534..557
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          563..854
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Site            order(571..572,575..576,578,604,607..608,611..612,
                     614..615,641,644..645,648..649,652)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          571..595
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          600..632
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          640..668
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          751..779
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(752,755..756,759..760,762,788,791..792,795..796,
                     798..799,822,825,829,832..833,836)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          784..816
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          821..852
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          870..982
                     /region_name="CpoB"
                     /note="Cell division protein CpoB, coordinates
                     peptidoglycan biosynthesis and outer membrane constriction
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG1729"
                     /db_xref="CDD:441335"
ORIGIN      
        1 mrrillfffg lsvfslnaqq siadegsesl yqqamesyrq esyqsaatlf qqylnrtesp
       61 svearyyaal sklkssdqsg ltdikrfiad epqhplagga nflignhffa kgdyeqaiay
      121 yelvsrsqln ikdqeemlfk sgyayleted veraktnfgq aidfrgayme dasyylgviy
      181 yrqknyneal avlepidkeg seysgqvsml iascyfetrs ytrlyayaep klkkvtgegk
      241 kelnrllgea yyeqkkfena apylqryidl nrrttastyy klgmcyfkld qnknaieyfk
      301 lsgldkgelg qlssfylgql ymkennlnya ysafkkvteg ttnpemvees yvtlakinyq
      361 rnqfadavsd fntflskypn sryklesnel laqsylkssn ydqalahles ipnkstplkr
      421 ayqkvafqkg qllfndskfq rateyfdkaa iyamdkeita qayylkgecl svlnqydqaq
      481 aaykkcmdqr iddwtnksry glgyisynek dyksaekyfq dfimnsfkrd eltvdarlrl
      541 adcfyvqkdy draikqygev tqpeyasyis yqlglayqlk gettkaiqsf dktiadnrsa
      601 fadnayfqkg kiyvasgdfk savpvyksml safpesnlip yaktdlalcy lnlndlsnak
      661 qyytdvldnh mnhevandal lglqevikkg ekvkdfeqym dkfqaanpdd gslevvafen
      721 akasyynqey seairkltqf nnkypnsgfa idalyfqads ylrmedwkna vaqfkkvidq
      781 gsssylmrsl dkrgkaylem kdysgainny qllkvkasnr kelyqsqegl mtayfqrndl
      841 dsalyyadei lagdwkpgni etdtwlikgr iyyrqksysl amdefikvan eaqnengaea
      901 kymigkvyhd qlqfkrslev lfdmnknygs ypywigksfl liaddylemg ellqaeattk
      961 siienatipe ivkearekme kikrkteevi vseakgdsik
//
LOCUS       WP_258097183             534 aa            linear   BCT 02-MAR-2025
DEFINITION  CotH kinase family protein [Marinoscillum pacificum].
ACCESSION   WP_258097183
VERSION     WP_258097183.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 534)
  AUTHORS   Nguyen,K.B., Sreelatha,A., Durrant,E.S., Lopez-Garrido,J.,
            Muszewska,A., Dudkiewicz,M., Grynberg,M., Yee,S., Pogliano,K.,
            Tomchick,D.R., Pawlowski,K., Dixon,J.E. and Tagliabracci,V.S.
  TITLE     Phosphorylation of spore coat proteins by a family of atypical
            protein kinases
  JOURNAL   Proc Natl Acad Sci U S A 113 (25), E3482-E3491 (2016)
   PUBMED   27185916
REFERENCE   2  (residues 1 to 534)
  AUTHORS   Zilhao,R., Naclerio,G., Henriques,A.O., Baccigalupi,L., Moran,C.P.
            Jr. and Ricca,E.
  TITLE     Assembly requirements and role of CotH during spore coat formation
            in Bacillus subtilis
  JOURNAL   J Bacteriol 181 (8), 2631-2633 (1999)
   PUBMED   10198031
REFERENCE   3  (residues 1 to 534)
  AUTHORS   Naclerio,G., Baccigalupi,L., Zilhao,R., De Felice,M. and Ricca,E.
  TITLE     Bacillus subtilis spore coat assembly requires cotH gene expression
  JOURNAL   J Bacteriol 178 (15), 4375-4380 (1996)
   PUBMED   8755863
  REMARK    Erratum:[J Bacteriol. 1996 Nov;178(21):6407. doi:
            10.1128/jb.178.21.6407-6407.1996.. PMID: 8991897]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020337.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08757.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..534
                     /product="CotH kinase family protein"
                     /calculated_mol_wt=61271
     Region          75..441
                     /region_name="CotH"
                     /note="CotH kinase protein; cl26696"
                     /db_xref="CDD:474846"
     Region          465..534
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mmktllltvl iscgsfalha qvnftesnlp iilidtdhei vdepkvmatm kiinnpsgnn
       61 qitdvpndyn gyigiefrgq ssqsfdkknf gielwdeage dikfpvlglp eeedwilhgp
      121 ysdkslirny ltfnlwaktg rygsrtvlte vvingdyrgv yvlmekikrd gervdiskle
      181 edendgddlt ggyivkldki negelvkswe sayapplrqe nfqivnflvd ypkpedltda
      241 qftyiktyis afeqalytkd fsdetgyqny idvasfidya llcelnrnvd syrlstylfk
      301 dkdsddgklt mgppwdynla fgnadycngg tttgwawdfn eacpwdywln pfwwnfflqd
      361 peyvslmksr wtelrngdws deaiaslidn atrklsgpav rnfqrwpilg tyvwpnnyvg
      421 ssygdelsyl ntwitnrlaw mdqaiadlev qeivlseein qelsvfpnpt anywqiqqsd
      481 nqftytiysl dgriveeaed tnhntaigst lksgkyllri tqnnktasql iikn
//
LOCUS       WP_258097224             386 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing
            protein [Marinoscillum pacificum].
ACCESSION   WP_258097224
VERSION     WP_258097224.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 386)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02737.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..386
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /GO_function="GO:0070403 - NAD+ binding [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=43340
     Region          2..386
                     /region_name="PRK08268"
                     /note="3-hydroxy-acyl-CoA dehydrogenase; Validated"
                     /db_xref="CDD:236211"
ORIGIN      
        1 mkvgiigsgt mgsgiaqvaa tagcevlvfd tnqkaldrsk eqlekvlsrl iekgkidqek
       61 kqsiqnniqy iselsglkss dliieaiied aaikktvfeg lekhvskdci iasntsslsi
      121 tslaaclknp erfigihffn paplmklvev ipaiqtnttl ttkvkeiits wekdvviakd
      181 tpgfivnkva rsfygesirm yeegladpat idwamkelgg fkmgpfelmd figndvnytv
      241 tetvykaffy dprfrpsftq krlaeagylg rksgrghydy segaeipepk tdpvegqkll
      301 drvlvmline aadtlhyria trddidtamt kgvnypkgll rwadhigiqt cvermdelyf
      361 eyheeryrcs pllrkmareq lkfyae
//
LOCUS       WP_258097232             505 aa            linear   BCT 02-MAR-2025
DEFINITION  S41 family peptidase [Marinoscillum pacificum].
ACCESSION   WP_258097232
VERSION     WP_258097232.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015531.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03572.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..505
                     /product="S41 family peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=57568
     Region          <244..500
                     /region_name="Peptidase_S41"
                     /note="C-terminal processing peptidase family S41;
                     cl02526"
                     /db_xref="CDD:470603"
     Site            413
                     /site_type="active"
                     /note="Active site serine [active]"
                     /db_xref="CDD:143475"
ORIGIN      
        1 mnkicylliv agligcsqpe fisgeealed lnafqedlef gasycnladv svasnleplk
       61 tyfgaqekvs vlelldslsk tmgyfgdrhs yvrvaddprn teisylpfat tpfqdslvia
      121 vkpnndqtyd lvypkypvlk svngmrvdel mdkadyqhqk apkeakfyre viklvfiekk
      181 lqragipftn slkcvftdlh nakdtvvtih tskeriawse ladktekdke slfgdqeglf
      241 qrmddvgiit ipemvrkgkd eskgfydllq ekmldfrdtd alvidvrnnp ggqrhfigff
      301 shyfsdpehp wvanvalare ttvdndeynd rmramnrdql nsrflfqwns pywndqeria
      361 idqfmssfep klafdsadfs aphlmvlpir efpvdsyryt qpvyilaneg sfsaatvlvt
      421 afkghpnvqi vgkkvdgssg msyrselpns kilykysrmv sfqrngltld gngvepdivl
      481 krdldhvlar rdaqmeellk linnk
//
LOCUS       WP_258097353            1255 aa            linear   BCT 02-MAR-2025
DEFINITION  two-component regulator propeller domain-containing protein
            [Marinoscillum pacificum].
ACCESSION   WP_258097353
VERSION     WP_258097353.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 1255)
  AUTHORS   Lowe,E.C., Basle,A., Czjzek,M., Firbank,S.J. and Bolam,D.N.
  TITLE     A scissor blade-like closing mechanism implicated in transmembrane
            signaling in a Bacteroides hybrid two-component system
  JOURNAL   Proc Natl Acad Sci U S A 109 (19), 7298-7303 (2012)
   PUBMED   22532667
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019135.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07494.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1255
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..1255
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /calculated_mol_wt=140447
     Region          12..>626
                     /region_name="COG3292"
                     /note="Periplasmic ligand-binding sensor domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:442521"
     Region          725..788
                     /region_name="Y_Y_Y"
                     /note="Y_Y_Y domain; pfam07495"
                     /db_xref="CDD:400051"
     Region          769..1255
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
ORIGIN      
        1 mkiryialcv gllvglscei caqqhivqhq ynfkqktvdd glsnnrisai hqdnrgfiwf
       61 gtyngldrfd grnivnykhd pskpgtisdn diraifsdse gtlwvggngg ldyfdlpkeq
      121 fitfdhdsls ggigrvdaik edqssnlwia stkglfrynl qskefyqfpq nddsgslpeg
      181 qisrilvdrn nnlwiaiykk ylcyynqksg eiftfknepr nsrslsgnqi ermyedrtgn
      241 vwfgtmnngl nrynpatrdf triipdandd ystrvraife dfegnffvgt rggvymrnrn
      301 ngqffmyass ehpfstlsqn siqcsyidst gtlwigtfag gvnftnlqrk pfihysskad
      361 nsyflsspnv yafcednqnn lwvgtdngln rldrnsgrft ayfnnpndrg slsyndvksl
      421 ssdregniwv gtnqgglnfy nrrtgrfsty mhddndpgsi stdkiyglll drnsdlwvln
      481 gvgyldilrn gssvfehtai kpyygiiegs ndklwiggqe aiyaydynsg dfteiqedsl
      541 lgdvytlmea sngelwigge tgiviyhike dffealnven aplnevygik edqnhqiwis
      601 teegliklsn altsdrtnik frvytkhdgl qskqfnynah yqsangelmf ggingfnifd
      661 pseiknndip pyvaltdlkv fnrsvqiges kngntilses istakelafn rhqksftidf
      721 vglhyaqpda nqyrymlegy dedwtytnaa rnfapysnlp ggeytfrvna anvdgvwave
      781 drtvvievip pfwntwtfrl lvlallvggv vaymrwrtaq arenqqrler kvaeatdkvk
      841 hqndalreqs dllqnaiket nevvkeaves gnfsaridls nkkgewkslg esinhlfesv
      901 akpftainev vnkladgdlt gryhgtargd iqkltdnlnk aivnlsnlls eiaerarylk
      961 esssemlnsg eqmklstgei asaigemsng aheqvrkide sssliegvla sstnmgqqad
     1021 aiqetakqga eksrsgmdla qdmdktmkhi lasskrtnea vssltnrske issvlriike
     1081 iasqtnllal naaieaaqag esgrgfavva eeirklaess kkstaeieel isavqndtse
     1141 tatligdmss siklgeqtts qslttfqeiy kyyqetldks esialatkkq tedisnvvni
     1201 isgvvvisee taagteqtas ssaelsagmq nyqdkseqvs siadelqekv srfrl
//
LOCUS       WP_258097385             898 aa            linear   BCT 02-MAR-2025
DEFINITION  prolyl oligopeptidase family serine peptidase [Marinoscillum
            pacificum].
ACCESSION   WP_258097385
VERSION     WP_258097385.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012546.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00326.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..898
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..898
                     /product="prolyl oligopeptidase family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=101393
     Region          <34..123
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
     Region          82..213
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
     Region          415..675
                     /region_name="DAP2"
                     /note="Dipeptidyl aminopeptidase/acylaminoacyl peptidase
                     [Amino acid transport and metabolism]; COG1506"
                     /db_xref="CDD:441115"
     Region          729..>857
                     /region_name="YfmG"
                     /note="Formylglycine-generating enzyme, required for
                     sulfatase activity, contains SUMF1/FGE domain
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1262"
                     /db_xref="CDD:440874"
ORIGIN      
        1 mkqililtll tfgftalhgq kdqwtpeeii htkyvsspsf sndgsmvvws qreglkekdk
       61 fvsklyltrl dqlkkelplt iqltqgehne ynaffskdde siyflssree gkklwklsiy
      121 ggepeevhef kngissvdwl ndstlvfiag egktlfdltn ekddteived sihwapkrlf
      181 tfdindksiq rltqnsfqis nysvsengky lvyrettsph ygvdgktkpn ivlkdvvkgt
      241 ettpfidlqt psgfeftkdg kgfyftatks snpewegagi eelyyftlat nsfekvdldw
      301 engisdyyli gsnvltelan gpyqkiryys ksgstwtpse idlgdkqqhv sllavsddgk
      361 kvlysystas klpeyytadi sakkktisft nekkftslnd glkkktiars eviywtgand
      421 eqvngilyyp kdyeagkkyp lilsihggpt gvdqdswser wstypqiltq kgafvlkpny
      481 hgsgnhslef iesikngnyy sleqidiyng iqhlnekgli dmdklgtmgw sngailttwm
      541 tlkypdmfkf aapgagdinw tsdygtcqfg vtfdqsyfgg apwddtngkh ynewyinnsp
      601 ifeiekiktp tiifhgsedr avprdqgwey yrglqqvgkt pvkflwfpgq phglqkithq
      661 lrkmkeeiaw idkylfeked dkneafktds plasiltlds attdglagvt keelllpavt
      721 plskdsisig vfevtiaqyh astgedydrl vanqpitgls qeqitkylaw ltektgktyr
      781 lpnakeakal hklavsatgq nnlnyyagye ltildankla eklenmkssl iqpvgtkaav
      841 tvhksakvfd lggnvaeyyl dggklkiydf saydfvdamn selpsssmhv gfrvivek
//
LOCUS       WP_258097471             487 aa            linear   BCT 02-MAR-2025
DEFINITION  M28 family peptidase [Marinoscillum pacificum].
ACCESSION   WP_258097471
VERSION     WP_258097471.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016289.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04389.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..487
                     /product="M28 family peptidase"
                     /calculated_mol_wt=55079
     Region          271..477
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
ORIGIN      
        1 mrrlhllsil ivlfpvlvyp qshqslveke tlkkhiqvla sdslegrgtg spglikaqny
       61 liaefarlgl kpgnqssyle sftlekrymg etylsigdkr wsnfeevifm psgyfqqeev
      121 ekevvfggfg sdeeleqidl kdrfvvvfid nlmahtkigm elnkrgaygm iavkssndvq
      181 qmstmksifr dhylkdhygl rdipnprdta frlkdvvksv ravitprsem kklmgysvak
      241 lqkiaesgel tsvpnskvtv kieldtdeme sanvtafipg nsekkivvta hydhlgknde
      301 gifngaddna tgvagmlqla eslsrikdlp ygiefvamsa eepgllgsky hvnqpafnpd
      361 dvlininldm igrqdeehqd sdylyvlgtd qsdplkelin qldevndeiv idyrhdqskg
      421 fggfysrsdn ysfhqrgila iffhtgthed yhhqtdtwqk idysalekrv kfieevilql
      481 egnqsil
//
LOCUS       WP_258097486             373 aa            linear   BCT 02-MAR-2025
DEFINITION  L,D-transpeptidase family protein [Marinoscillum pacificum].
ACCESSION   WP_258097486
VERSION     WP_258097486.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 373)
  AUTHORS   Biarrotte-Sorin,S., Hugonnet,J.E., Delfosse,V., Mainardi,J.L.,
            Gutmann,L., Arthur,M. and Mayer,C.
  TITLE     Crystal structure of a novel beta-lactam-insensitive peptidoglycan
            transpeptidase
  JOURNAL   J Mol Biol 359 (3), 533-538 (2006)
   PUBMED   16647082
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015679.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03734.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..373
                     /product="L,D-transpeptidase family protein"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=41984
     Region          34..112
                     /region_name="DUF4398"
                     /note="Domain of unknown function (DUF4398); pfam14346"
                     /db_xref="CDD:464144"
     Region          212..356
                     /region_name="YafK"
                     /note="Murein L,D-transpeptidase YafK [Cell
                     wall/membrane/envelope biogenesis]; COG3034"
                     /db_xref="CDD:442269"
ORIGIN      
        1 mlryfialiv vvvlittivf irlsnsqyis paseisiart aitsamqaks dsyayptlkr
       61 aqtlydsamn lwstenerfi lyrdyqsarn laneaakian salrtaklae selkqlvadq
      121 lgridkmiln ydqnyanvpl tkslrqelan arllyheaks ayerkdlkrs klkldnaqvl
      181 itgltdhthq llanyfeeyd qwmkwvnkai vrssrektts ivvdkfarec kiyksgklvk
      241 tlpvelganw igdkmhqgdk ttpegnyhiv ktkvngdtry ykallinypn dedkirfsql
      301 qsqgrikkgv signlieihg gggkgvdwtd gcialnnsdm divfgysqvn tpvtivgslr
      361 pldeirtsss akp
//
LOCUS       WP_258097555             179 aa            linear   BCT 02-MAR-2025
DEFINITION  HEPN domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258097555
VERSION     WP_258097555.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 179)
  AUTHORS   Anantharaman,V., Makarova,K.S., Burroughs,A.M., Koonin,E.V. and
            Aravind,L.
  TITLE     Comprehensive analysis of the HEPN superfamily: identification of
            novel roles in intra-genomic conflicts, defense, pathogenesis and
            RNA processing
  JOURNAL   Biol Direct 8, 15 (2013)
   PUBMED   23768067
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037889.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18735.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..179
                     /product="HEPN domain-containing protein"
                     /calculated_mol_wt=20626
     Region          5..179
                     /region_name="HEPN_RiboL-PSP"
                     /note="RiboL-PSP-HEPN; pfam18735"
                     /db_xref="CDD:465851"
ORIGIN      
        1 mgavesikee ykgivdflae qkqpslqsdv nkyftkilvl saasyfehqi qeiliefvst
       61 tsnkdsrvtn flkkkaisqq yhtffnwgek nnpekpgkna nsffslfgqe fkkdlneein
      121 nnveldesik afleighlrn llvhsnfaay sldfktsdei ftlydkastf irfieeklk
//
LOCUS       WP_258097584             173 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6913 domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258097584
VERSION     WP_258097584.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046449.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21857.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..173
                     /product="DUF6913 domain-containing protein"
                     /calculated_mol_wt=20096
ORIGIN      
        1 mlkktivnyk tkknlkkhhs qetmdfrtsn rfaivysdqf eneeklkeii kdlkglgkev
       61 svmvychqpk kkiselpfft nlditygadi kgedlktfls qqydfalcfd qsghflidyv
      121 fslinskcrv gitsdershh ydlminssdd kaslssevir ylkmiqsney qpi
//
LOCUS       WP_258097631             215 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6261 family protein [Marinoscillum pacificum].
ACCESSION   WP_258097631
VERSION     WP_258097631.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040365.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19775.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..215
                     /product="DUF6261 family protein"
                     /calculated_mol_wt=23593
     Region          61..211
                     /region_name="DUF6261"
                     /note="Family of unknown function (DUF6261); pfam19775"
                     /db_xref="CDD:437607"
ORIGIN      
        1 mkmitvpqlr iaqlqtfteg vlsttanlse vsaqvadvqa hfdafkegmi rakaisdkpm
       61 ldrtrdslns gffksveaeq lfphkggake llddlvkits eygfrlyrmt ydeqtaqtdn
      121 mlkeleglkl gplpavsrwi aplkaandaf kattveyfkd vtasgdteaa tstapaltds
      181 inklftmlfa hvqisgseal iqaykelitq vdayk
//
LOCUS       WP_258097662             438 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome c3 family protein [Marinoscillum pacificum].
ACCESSION   WP_258097662
VERSION     WP_258097662.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 438)
  AUTHORS   Pokkuluri,P.R., Londer,Y.Y., Duke,N.E., Pessanha,M., Yang,X.,
            Orshonsky,V., Orshonsky,L., Erickson,J., Zagyanskiy,Y.,
            Salgueiro,C.A. and Schiffer,M.
  TITLE     Structure of a novel dodecaheme cytochrome c from Geobacter
            sulfurreducens reveals an extended 12 nm protein with interacting
            hemes
  JOURNAL   J Struct Biol 174 (1), 223-233 (2011)
   PUBMED   21130881
REFERENCE   2  (residues 1 to 438)
  AUTHORS   Pokkuluri,P.R., Londer,Y.Y., Yang,X., Duke,N.E., Erickson,J.,
            Orshonsky,V., Johnson,G. and Schiffer,M.
  TITLE     Structural characterization of a family of cytochromes c(7)
            involved in Fe(III) respiration by Geobacter sulfurreducens
  JOURNAL   Biochim Biophys Acta 1797 (2), 222-232 (2010)
   PUBMED   19857457
REFERENCE   3  (residues 1 to 438)
  AUTHORS   Morgado,L., Bruix,M., Orshonsky,V., Londer,Y.Y., Duke,N.E.,
            Yang,X., Pokkuluri,P.R., Schiffer,M. and Salgueiro,C.A.
  TITLE     Structural insights into the modulation of the redox properties of
            two Geobacter sulfurreducens homologous triheme cytochromes
  JOURNAL   Biochim Biophys Acta 1777 (9), 1157-1165 (2008)
   PUBMED   18534185
REFERENCE   4  (residues 1 to 438)
  AUTHORS   Rodrigues,M.L., Oliveira,T.F., Pereira,I.A. and Archer,M.
  TITLE     X-ray structure of the membrane-bound cytochrome c quinol
            dehydrogenase NrfH reveals novel haem coordination
  JOURNAL   EMBO J 25 (24), 5951-5960 (2006)
   PUBMED   17139260
REFERENCE   5  (residues 1 to 438)
  AUTHORS   Pokkuluri,P.R., Londer,Y.Y., Duke,N.E., Erickson,J., Pessanha,M.,
            Salgueiro,C.A. and Schiffer,M.
  TITLE     Structure of a novel c7-type three-heme cytochrome domain from a
            multidomain cytochrome c polymer
  JOURNAL   Protein Sci 13 (6), 1684-1692 (2004)
   PUBMED   15133162
  REMARK    Erratum:[Protein Sci. 2009 Mar;18(3):675]
REFERENCE   6  (residues 1 to 438)
  AUTHORS   Afkar,E. and Fukumori,Y.
  TITLE     Purification and characterization of triheme cytochrome c7 from the
            metal-reducing bacterium, Geobacter metallireducens
  JOURNAL   FEMS Microbiol Lett 175 (2), 205-210 (1999)
   PUBMED   10386369
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025875.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14522.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..438
                     /product="cytochrome c3 family protein"
                     /calculated_mol_wt=48141
     Region          50..138
                     /region_name="CytC552"
                     /note="Cytochrome c551/c552 [Energy production and
                     conversion]; COG4654"
                     /db_xref="CDD:443692"
     Region          265..396
                     /region_name="Cytochrom_C3"
                     /note="Heme-binding domain of the class III cytochrome C
                     family and related proteins; cd08168"
                     /db_xref="CDD:173979"
     Site            order(271,274,282,285..287,303,356,367,370..371,391,
                     394..395)
                     /site_type="other"
                     /note="heme-binding residues [chemical binding]"
                     /db_xref="CDD:173979"
     Region          364..437
                     /region_name="Cytochrom_C3"
                     /note="Heme-binding domain of the class III cytochrome C
                     family and related proteins; cl23752"
                     /db_xref="CDD:474044"
ORIGIN      
        1 mltkkqsmsk tprfvltslf faltlllsts lsaqdaasee gaadgiptda glvsageslf
       61 kanctqchai qekvigpalk nvherrekew linwirnsqk liqsgdetav alweeynkta
      121 mpaypfsede itsilayvkv estkepvaat taatgdaqva stgnenavss gyltailvvl
      181 vvvlvliliv lglivsvltk ylkdqkgels eedqevvgqk fdlqkllmsd ffigavafif
      241 valllktaid gafsigvqqg yqptqpiafs hqihagqyei dcnychtgvr kskaanipsa
      301 nicmnchtai ktespeiaki ykaidydpst geygdntqpi ewvrvhnlpd layfnhsqhv
      361 kvgglecqtc hgpieemdvv yqystltmgw cinchretnv ntkdneyysk lvelhsehsk
      421 epmkvedigg lecskchy
//
LOCUS       WP_258097684             187 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5683 domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258097684
VERSION     WP_258097684.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040144.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18935.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..187
                     /product="DUF5683 domain-containing protein"
                     /calculated_mol_wt=20925
     Region          39..186
                     /region_name="DUF5683"
                     /note="Family of unknown function (DUF5683); pfam18935"
                     /db_xref="CDD:465918"
ORIGIN      
        1 mailfvmtlp llssgqinqs dsiflnredi etietysqld pnkaaifsav lpglgqgynn
       61 qywkipiiyg ggllighyin ynhriyhefr naliaeadgn pntinpyegr fstealqrqr
      121 dafrrnrdml iiiagafyll nivdahvsah lhefdinenl smkvspsiqs splfsqavgl
      181 svslrlk
//
LOCUS       WP_258097707             594 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Marinoscillum pacificum].
ACCESSION   WP_258097707
VERSION     WP_258097707.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 594)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..594
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=67664
     Region          45..349
                     /region_name="GH43-like"
                     /note="Glycosyl hydrolase family 43 protein;
                     uncharacterized; cd08982"
                     /db_xref="CDD:350096"
     Region          375..482
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
     Region          <508..>586
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
ORIGIN      
        1 mkavliilll sgswlgfsqt qttycnpidi dytymshyra erdvsyrsga dpavinfngk
       61 yfmfvtrshg ywmsedmgtw kfikpqswyf ngcnapaaav rngkvivlgd psgrgaviet
      121 ynpelgnwqt nyavlnlpvg vqdpdlfvdd dnqvylyees snkwpihgia ldtanfyipv
      181 geqkdlfnlh peqhgwerfg qnhtsdmdpy iegpwmtkhg dtyyleysap gtqwnvyadg
      241 vytsksplgp feyadynpvs ykpggfltga ghgstvkdnq ghywhfasmp isvnfkferr
      301 igmfptgfee dgqmyvntay gdyphylpev gvldhknrft gwmllskgks iktnavvkdv
      361 vqkvadenas gyqleqeapn yeaaranden lrtfwvapsn sdslylemdl gavmdiravq
      421 infqdfnani fgkpdtlrqq fyiltslngk dwevaidysk nqrdqphayi elgkpiaary
      481 ikyqnvyfpn kylaigelri fgkgrgkapa mpksfeakrq adqrncnltw ktdkdatgyv
      541 lywgiaedrl nnsvmiydqn syelralntg vdyyyqveaf nengiskksl iikn
//
LOCUS       WP_258097725              97 aa            linear   BCT 02-MAR-2025
DEFINITION  GIY-YIG nuclease family protein [Marinoscillum pacificum].
ACCESSION   WP_258097725
VERSION     WP_258097725.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 97)
  AUTHORS   Dunin-Horkawicz,S., Feder,M. and Bujnicki,J.M.
  TITLE     Phylogenomic analysis of the GIY-YIG nuclease superfamily
  JOURNAL   BMC Genomics 7, 98 (2006)
   PUBMED   16646971
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 97)
  AUTHORS   Van Roey,P., Meehan,L., Kowalski,J.C., Belfort,M. and Derbyshire,V.
  TITLE     Catalytic domain structure and hypothesis for function of GIY-YIG
            intron endonuclease I-TevI
  JOURNAL   Nat Struct Biol 9 (11), 806-811 (2002)
   PUBMED   12379841
REFERENCE   3  (residues 1 to 97)
  AUTHORS   Kowalski,J.C., Belfort,M., Stapleton,M.A., Holpert,M.,
            Dansereau,J.T., Pietrokovski,S., Baxter,S.M. and Derbyshire,V.
  TITLE     Configuration of the catalytic GIY-YIG domain of intron
            endonuclease I-TevI: coincidence of computational and molecular
            findings
  JOURNAL   Nucleic Acids Res 27 (10), 2115-2125 (1999)
   PUBMED   10219084
REFERENCE   4  (residues 1 to 97)
  AUTHORS   Aravind,L., Walker,D.R. and Koonin,E.V.
  TITLE     Conserved domains in DNA repair proteins and evolution of repair
            systems
  JOURNAL   Nucleic Acids Res 27 (5), 1223-1242 (1999)
   PUBMED   9973609
REFERENCE   5  (residues 1 to 97)
  AUTHORS   Sharma,M., Ellis,R.L. and Hinton,D.M.
  TITLE     Identification of a family of bacteriophage T4 genes encoding
            proteins similar to those present in group I introns of fungi and
            phage
  JOURNAL   Proc Natl Acad Sci U S A 89 (14), 6658-6662 (1992)
   PUBMED   1631169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013691.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01541.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..97
                     /product="GIY-YIG nuclease family protein"
                     /calculated_mol_wt=11188
     Region          5..74
                     /region_name="GIY-YIG_SF"
                     /note="GIY-YIG nuclease domain superfamily; cl15257"
                     /db_xref="CDD:472790"
     Site            order(5..6,17..19)
                     /site_type="other"
                     /note="GIY-YIG motif/motif A"
                     /db_xref="CDD:198380"
     Site            order(6,17,19,28,32,67)
                     /site_type="active"
                     /db_xref="CDD:198380"
     Site            order(28,67)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:198380"
     Site            67
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:198380"
ORIGIN      
        1 mtyivyilhs sklnkfytgs selaaserle lhlnkyysnn kfsakaddwk lflaidcsnk
       61 sqalaiekhi kkmksskyit nlkqypemia klldtyk
//
LOCUS       WP_258097777            1219 aa            linear   BCT 02-MAR-2025
DEFINITION  chemotaxis protein CheB [Marinoscillum pacificum].
ACCESSION   WP_258097777
VERSION     WP_258097777.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 1219)
  AUTHORS   West,A.H., Martinez-Hackert,E. and Stock,A.M.
  TITLE     Crystal structure of the catalytic domain of the chemotaxis
            receptor methylesterase, CheB
  JOURNAL   J Mol Biol 250 (2), 276-290 (1995)
   PUBMED   7608974
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013502.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01339.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1219
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..1219
                     /product="chemotaxis protein CheB"
                     /GO_component="GO:0005737 - cytoplasm [Evidence IEA]"
                     /GO_function="GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA]"
                     /GO_function="GO:0008984 - protein-glutamate
                     methylesterase activity [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /GO_process="GO:0006935 - chemotaxis [Evidence IEA]"
                     /calculated_mol_wt=139514
     Region          11..190
                     /region_name="CheB-CheR_fusion"
                     /note="Chemotaxis response regulator protein-glutamate
                     methylesterase, CheB, fused with CheR domain; cd16434"
                     /db_xref="CDD:319753"
     Region          209..469
                     /region_name="CheR"
                     /note="Methylase of chemotaxis methyl-accepting proteins
                     [Signal transduction mechanisms]; COG1352"
                     /db_xref="CDD:440963"
     Region          <505..>716
                     /region_name="rad50"
                     /note="TIGR00606"
                     /db_xref="CDD:129694"
     Region          643..721
                     /region_name="ZapB"
                     /note="Cell division protein ZapB, interacts with FtsZ
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG3074"
                     /db_xref="CDD:442308"
     Region          712..>975
                     /region_name="KinE"
                     /note="Sporulation sensor histidine kinase E [Cell cycle
                     control, cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG5809"
                     /db_xref="CDD:444511"
     Region          721..829
                     /region_name="PAS_10"
                     /note="PAS domain; pfam13596"
                     /db_xref="CDD:404482"
     Region          963..1215
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
ORIGIN      
        1 mkkpqskirk vigigasagg ldaiqhlfdn ippntdnafv iiqhlspdfk slmpellakh
       61 tempiftted kqkilpnciy lnqstrnlhi kgdtlylldk gpksnvnlpi diffhtlgee
      121 fkensigiil sgtgsdgsrg iksikeaggl lfvqspdtaq fdgmpnasia trlidfilpa
      181 skigeavsky sstelnslls spdasisyde ifskilmeiq kysgldlkqy kdntlhrrle
      241 krlnvnnvdt lneylsilet senekkflyq dfligvtsff rdkeafdflk sdvlpflcnp
      301 eshinpirvw ipgcstgeea ysiaiiidey itshnidlqf kifatdinea nlqranqglf
      361 hinsseeide qslkkyfikt gdqiqivkhi rdkivfsshn ilkdppfirm dliccrnlli
      421 yleneaqrkv ighilfslnk dgflflgnse svgkyendle vlsskwkifk nisnthnrpa
      481 dlsteikpdt ifkykgikey pivpkresei qyykyisdky spslifidkd fnilflkgnv
      541 geklspregl fqqniiqlve pslasvirng vrrakteqkp ilikdvliqt rgseivtnlt
      601 feltnqfgvd rdiyiiayge dreiteeaie iqninlsdta aqriedleye lrikneelrn
      661 vieeletane elqsaneelm asneelqstn eelqsvneel ftvntelqek nkeladvndv
      721 innlinatdi atlfldkelk ikkftnslkr nlalepsdig rsissfsfnf shtisqiiig
      781 esercletkr pfekqitdkd essfllrinp ffnhydtidg vvitlvdvte lmstreelrl
      841 medkyanlfk nisvgvihge iisdtdgkpa dlklisinpe fetqigktsi evignklstt
      901 lrdpevktii kildkssksg ipynmryysp sinkhyivrs frpkkgecaa tfeditellh
      961 gkeilrktie rlnlaidltd taiwewdvks nkvtdsndhw rtiynlnted vtesfdqyif
     1021 addrkkvwde inalidgkvs kyhqifryed pktqrlkwie nvgqtfkrdn sgnistvlgv
     1081 srditserea ylkleeekdf svsitenats giyiydlkeg antymnnrys eilgwtmdei
     1141 nkmdavtffn lfhpddqeav kkhmdiiise kkedsisyqf khkdgnwvkc fsvdsplefn
     1201 edgtvksfig sfidlknle
//
LOCUS       WP_258097780             138 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6691 family protein [Marinoscillum pacificum].
ACCESSION   WP_258097780
VERSION     WP_258097780.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042761.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20398.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..138
                     /product="DUF6691 family protein"
                     /calculated_mol_wt=15400
     Region          6..135
                     /region_name="DUF6691"
                     /note="Family of unknown function (DUF6691); cl46265"
                     /db_xref="CDD:480605"
ORIGIN      
        1 mnkikflftg ivfgvvltka evvswyriye mfrfesfhmy gvigsavvlg ifciqaikrf
       61 klkdfsgrpi vippkqrkfw ppllggtifg lgwaligacp gpiyiimgng flvfivvfls
      121 allgtflygl vmnklpqk
//
LOCUS       WP_258096724              87 aa            linear   BCT 02-MAR-2025
DEFINITION  recombination-associated protein RdgC, partial [Klebsiella
            pneumoniae].
ACCESSION   WP_258096724
VERSION     WP_258096724.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 87)
  AUTHORS   Mehr,I.J., Long,C.D., Serkin,C.D. and Seifert,H.S.
  TITLE     A homologue of the recombination-dependent growth gene, rdgC, is
            involved in gonococcal pilin antigenic variation
  JOURNAL   Genetics 154 (2), 523-532 (2000)
   PUBMED   10655208
REFERENCE   2  (residues 1 to 87)
  AUTHORS   Ryder,L., Sharples,G.J. and Lloyd,R.G.
  TITLE     Recombination-dependent growth in exonuclease-depleted recBC sbcBC
            strains of Escherichia coli K-12
  JOURNAL   Genetics 143 (3), 1101-1114 (1996)
   PUBMED   8807285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016281.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04381.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Klebsiella pneumoniae"
                     /db_xref="taxon:573"
     gene            <1..>87
                     /gene="rdgC"
     Protein         <1..>87
                     /product="recombination-associated protein RdgC"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
     Region          <1..>81
                     /region_name="RdgC"
                     /note="Putative exonuclease, RdgC; cl01122"
                     /db_xref="CDD:470084"
ORIGIN      
        1 ndvvraraad leeqqgfkpg rkqlkelkeq vieellpraf svnsttrawi dtangwlvid
       61 agssskadem rgmlfkaidp lamtgvy
//
LOCUS       WP_258097297             531 aa            linear   BCT 02-MAR-2025
DEFINITION  SCO family protein [Marinoscillum pacificum].
ACCESSION   WP_258097297
VERSION     WP_258097297.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 531)
  AUTHORS   Buggy,J. and Bauer,C.E.
  TITLE     Cloning and characterization of senC, a gene involved in both
            aerobic respiration and photosynthesis gene expression in
            Rhodobacter capsulatus
  JOURNAL   J Bacteriol 177 (23), 6958-6965 (1995)
   PUBMED   7592491
REFERENCE   2  (residues 1 to 531)
  AUTHORS   Buchwald,P., Krummeck,G. and Rodel,G.
  TITLE     Immunological identification of yeast SCO1 protein as a component
            of the inner mitochondrial membrane
  JOURNAL   Mol Gen Genet 229 (3), 413-420 (1991)
   PUBMED   1944230
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014667.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02630.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..531
                     /product="SCO family protein"
                     /calculated_mol_wt=60635
     Region          215..361
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 mnlktkntec vsitseeeva eylndlrlra rtgyalvpll sehhaiyrgk gtnqinrikg
       61 yvlasfysvs lpeealiyvl eelensrtay ltaasamair gmseknvhvv pyllkgiinm
      121 rlrddavnld tyapdwgesk wttalnelle tlewmgayak eaiplltels edssfnhlir
      181 nkikttieli lndeeevdnc csitlpeids pdskldfsfi kqlqvqdqyg evfslndllk
      241 kptiisffyt rctnpnkcal tvsklgrlhn llkqkhyank vniilftyds dfdnpnrlkg
      301 ygenksfdfs hsskivrtss sdfqllmqyf glgvnfanst vsqhtielfv tdrhgivkks
      361 fkrlqwkeee vftwiqsnwt llnqgsyfis afkkrachgl ntmgaslisl siaffpkcpl
      421 cwygylsvlg isglktipys pwlfpvllif lglhlliifr arkkrngitp flfstigslf
      481 illstlwvei sitryvgiif ivlgsllnsl dfklylqlir piqrlmltfi r
//
LOCUS       WP_258097409             117 aa            linear   BCT 02-MAR-2025
DEFINITION  SiaC family regulatory phosphoprotein [Marinoscillum pacificum].
ACCESSION   WP_258097409
VERSION     WP_258097409.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 117)
  AUTHORS   Poh,W.H., Lin,J., Colley,B., Muller,N., Goh,B.C., Schleheck,D., El
            Sahili,A., Marquardt,A., Liang,Y., Kjelleberg,S., Lescar,J.,
            Rice,S.A. and Klebensberger,J.
  TITLE     The SiaABC threonine phosphorylation pathway controls biofilm
            formation in response to carbon availability in Pseudomonas
            aeruginosa
  JOURNAL   PLoS One 15 (11), e0241019 (2020)
   PUBMED   33156827
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020903.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09345.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..117
                     /product="SiaC family regulatory phosphoprotein"
                     /calculated_mol_wt=13647
ORIGIN      
        1 msysfqalvq errssnflnl rtiskinqfd ivyqpliedf knkvrytksg elvinmdfln
       61 kerartlfgl fkflqteqrl gavlkitwev plsnilmlet amdfaelyel qvtisid
//
LOCUS       WP_258097811             336 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Marinoscillum pacificum].
ACCESSION   WP_258097811
VERSION     WP_258097811.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 336)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..336
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=38679
     Region          3..>118
                     /region_name="OmpR"
                     /note="DNA-binding response regulator, OmpR family,
                     contains REC and winged-helix (wHTH) domain [Signal
                     transduction mechanisms, Transcription]; COG0745"
                     /db_xref="CDD:440508"
     Region          223..329
                     /region_name="CitB"
                     /note="DNA-binding response regulator DpiB of
                     citrate/malate metabolism [Transcription, Signal
                     transduction mechanisms]; COG4565"
                     /db_xref="CDD:443622"
ORIGIN      
        1 mdvllieddr giseavveml rlnqmsvtca yccndalevl tdfkpdiiis dimlpdgtgf
       61 dilrflrndt tiidyipfif lsgraahqdi rqgmnlgadd yltkpfeyed liqtirtvye
      121 knqvkhqhlt klegelaskm hqidqvksit shdlrsrvvk ifnmiellre eklpkekfid
      181 wmmqsgeyfd evmykiheil nesmnqpasy sgslhlpksm whveddviqr mfvksivdks
      241 fahldyqsfd nanealglml qgefpdyill dinmpgmsgf elldamrekq lntqvimlss
      301 sisdtdives ytyqnvvgye vkplkkevfn hlfglg
//
LOCUS       WP_258097883             391 aa            linear   BCT 02-MAR-2025
DEFINITION  aspartyl protease family protein [Marinoscillum pacificum].
ACCESSION   WP_258097883
VERSION     WP_258097883.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025034.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13650.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..391
                     /product="aspartyl protease family protein"
                     /calculated_mol_wt=43412
     Region          36..130
                     /region_name="Asp_protease_2"
                     /note="Aspartyl protease; pfam13650"
                     /db_xref="CDD:433378"
     Site            51..53
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133150"
     Site            51
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133150"
     Region          308..387
                     /region_name="cpPDZ_Deg_HtrA-like"
                     /note="permuted PDZ domain of Deg/high-temperature
                     requirement factor A (HtrA) family of housekeeping serine
                     proteases and related domains; cl49614"
                     /db_xref="CDD:483954"
     Site            order(309..315,324,327,359..360,363)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467621"
ORIGIN      
        1 mkkilslasi vmvlqvsaqk litetefelf gdhifisvsv ddsdpvdfif dtgdglsvld
       61 tdiakklnlk pdhqstktsa qgsisgslia hnkieindvk lddielytte lshleqtigr
      121 nidgiigydl lknyvvkidy edmkiklynq dgyqntgnge kfsfklihyi ptiqasvtln
      181 ngesytedff lntgagttld fntpfaqkhd viaktgdhys ypvagledne tmhyegriqn
      241 fsigtfnidq lpigisqaeh giqhnkkvag ivgngvlkhf nitfdyskne vylesnknfe
      301 kpylvnasgi nlqfnkertk llihrvfegs paeiagikvd aqllavdgqv vesmklpeir
      361 aalkqanksv tvkylqdgie kestldldpl i
//
LOCUS       WP_258097906             295 aa            linear   BCT 02-MAR-2025
DEFINITION  META domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258097906
VERSION     WP_258097906.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 295)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
REFERENCE   2  (residues 1 to 295)
  AUTHORS   Uliana,S.R., Goyal,N., Freymuller,E. and Smith,D.F.
  TITLE     Leishmania: overexpression and comparative structural analysis of
            the stage-regulated meta 1 gene
  JOURNAL   Exp Parasitol 92 (3), 183-191 (1999)
   PUBMED   10403759
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015669.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03724.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..295
                     /product="META domain-containing protein"
                     /calculated_mol_wt=33321
     Region          194..284
                     /region_name="META"
                     /note="META domain; cl01245"
                     /db_xref="CDD:470130"
ORIGIN      
        1 mliglliltf sgckeetetp nplsgneqis mkfdgkyaaq dsgssviyyn qylsinsfgi
       61 tgfrdnflqy sfefngmydg tlnvnlinel sltfieidyt nvrftnftpt dghfiitefd
      121 sinnsvsgef emtlendeht rkieikegkl qdlpfaelfc qpnwpvfthd stsiynkwgi
      181 vgirdedgnm dyppcdsspf ititpqskne dsenfqgsds sngfigkasi deenqtitvg
      241 elvstlafan iwnvdysrkf meilndatvh yqfsdtelii skensemelv fvpve
//
LOCUS       WP_258097941             941 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Marinoscillum pacificum].
ACCESSION   WP_258097941
VERSION     WP_258097941.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 941)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 941)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 941)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 941)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..941
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..941
                     /product="ATP-binding protein"
                     /calculated_mol_wt=108133
     Region          49..72
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          82..346
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Site            order(88..89,92..93,95,125,128..129,132..133,135..136,159,
                     168..169,172..173,176)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          88..112
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          117..153
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          158..192
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          244..272
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          302..649
                     /region_name="WalK"
                     /note="Sensor histidine kinase WalK [Signal transduction
                     mechanisms]; COG5002"
                     /db_xref="CDD:444026"
     Region          688..>811
                     /region_name="RpfG"
                     /note="Response regulator c-di-GMP phosphodiesterase, RpfG
                     family, contains REC and HD-GYP domains [Signal
                     transduction mechanisms]; COG3437"
                     /db_xref="CDD:442663"
     Region          860..939
                     /region_name="HTH_18"
                     /note="Helix-turn-helix domain; pfam12833"
                     /db_xref="CDD:432818"
ORIGIN      
        1 myirifalvf sifaissaya eenqvvdslh lelrrlsesd lkqrvainna laweyrdvrp
       61 dsslffanra lrisrengfl ddeiqsinyi gvayrnlsnf skafekylea lklaeereng
      121 eqrgyslinl gnlylyqtnf qgaikyfiqa ldqaqsladn rmvgycflnl grsykgisey
      181 gqaelyykqa idirgelgde ygtlaaeidl aetymlqgnl kqseryhlsl aerinpdtnp
      241 rmlsvvyknm selylaknel nkakqyafka iditrnvnsr yeeknvlenl skiyangsef
      301 eeayntnvry gelnqqlfse enirriermk sqyemeqqea eneflrkqae lnqeiinrqk
      361 iiitltvlgi vlfiigigvt vrayllkknl snkisrqkdk iqrdkeviek qsnklkelda
      421 aksrffanvs hdlrsplsli ignlemlred edvvltpgam knldtgyknc khllyltdei
      481 ndltkleegk inlkqevvrf gkylemltem fvgtaeykgv klscknyike hiavfidprq
      541 fekifynlvs nairhtskgd kitiethddg dsvllnvids gegipkesle yvfdrfyqsk
      601 dnqyrtkegl giglalvkel velhggtiav estlglgtsf kmsfpkvnam gedanigstf
      661 syvserkhly deidreesag islpkqeedk esilivddhp eiryhirqil eddyhiveaa
      721 hgiealellk hndisliisd lmmpwmdgfe liealkandd ynkipvlvvs ariseqdqek
      781 vlyqgindyl qkpfqkkelk lrinnllasr rnysgselne tfsklfdkss ldavekdils
      841 kldqvimdri ddenlsvfdl asamaaserq vyrlvkkltg mtpfeyvaei rmkyadylir
      901 knkvknatea aksiglknvt afskqyekkf gmkptdvlke a
//
LOCUS       WP_258097962             329 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Marinoscillum
            pacificum].
ACCESSION   WP_258097962
VERSION     WP_258097962.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020251.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08667.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..329
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=38893
     Region          25..>86
                     /region_name="HTH_XRE"
                     /note="Helix-turn-helix XRE-family like proteins.
                     Prokaryotic DNA binding proteins belonging to the
                     xenobiotic response element family of transcriptional
                     regulators; cl22854"
                     /db_xref="CDD:473980"
     Region          <184..243
                     /region_name="SDH_N_domain"
                     /note="Saccharopine dehydrogenase N-terminal domain;
                     cl19054"
                     /db_xref="CDD:450248"
ORIGIN      
        1 mntdrdiqis flewvkiknp qlrfadelvt lldiskdsay rrmrgdtllt fneirkisqh
       61 fnasldtffn lskdtvlfhk rmlnvnfgyn eflnavlqsi qliqrkesyh mtfiakdipp
      121 fhyfrfpels afksyfwmks ilkeptlsnk vfnrnvispe mtrlceeiwd ayqqvpslei
      181 wsdetfnvtl rqmeysyevg altkvqletl inelrqllnl laeeaeagvk kspcnkpvpn
      241 gryelyynei eigdntiffs mdeqrmvhkt ynmlnllstt dnefcenier yittilqksi
      301 pisnsseker mrffntmhsk lnefervtg
//
LOCUS       WP_258098006             261 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase family 25 protein [Marinoscillum pacificum].
ACCESSION   WP_258098006
VERSION     WP_258098006.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 261)
  AUTHORS   Campbell,J.A., Davies,G.J., Bulone,V. and Henrissat,B.
  TITLE     A classification of nucleotide-diphospho-sugar glycosyltransferases
            based on amino acid sequence similarities
  JOURNAL   Biochem J 326 (Pt 3) (Pt 3), 929-939 (1997)
   PUBMED   9334165
  REMARK    Erratum:[Biochem J 1998 Feb 1;329(Pt 3):719]
REFERENCE   2  (residues 1 to 261)
  AUTHORS   Jennings,M.P., Hood,D.W., Peak,I.R., Virji,M. and Moxon,E.R.
  TITLE     Molecular analysis of a locus for the biosynthesis and
            phase-variable expression of the lacto-N-neotetraose terminal
            lipopolysaccharide structure in Neisseria meningitidis
  JOURNAL   Mol Microbiol 18 (4), 729-740 (1995)
   PUBMED   8817494
REFERENCE   3  (residues 1 to 261)
  AUTHORS   Gotschlich,E.C.
  TITLE     Genetic locus for the biosynthesis of the variable portion of
            Neisseria gonorrhoeae lipooligosaccharide
  JOURNAL   J Exp Med 180 (6), 2181-2190 (1994)
   PUBMED   7964493
REFERENCE   4  (residues 1 to 261)
  AUTHORS   Cope,L.D., Yogev,R., Mertsola,J., Latimer,J.L., Hanson,M.S.,
            McCracken,G.H. Jr. and Hansen,E.J.
  TITLE     Molecular cloning of a gene involved in lipooligosaccharide
            biosynthesis and virulence expression by Haemophilus influenzae
            type B
  JOURNAL   Mol Microbiol 5 (5), 1113-1124 (1991)
   PUBMED   1956289
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013882.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01755.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..261
                     /product="glycosyltransferase family 25 protein"
                     /calculated_mol_wt=30393
     Region          5..>175
                     /region_name="COG3306"
                     /note="Glycosyltransferase involved in LPS biosynthesis,
                     GR25 family [Cell wall/membrane/envelope biogenesis]"
                     /db_xref="CDD:442535"
ORIGIN      
        1 mikaifcnnl drstdrrehm snlfeslgvk dnvyrfqafh gatidnpnnf qkgkignlts
       61 qmaiwkyism qedgwymime ddiklrdefd psifmnqlet aisqfpsgih avhltrnqnk
      121 lfdkkfdgkp gpykllghlg hqeirkcsli fpwstltgay lfrpkaayrv fryayysiky
      181 akvlpfkkfn tdvlmvrgly ttrhgamvqa fiqndfhdes tnsvsvlhdi ttnskdvkve
      241 iyptldyfkn dahkrlspwf e
//
LOCUS       WP_258098038              73 aa            linear   BCT 02-MAR-2025
DEFINITION  YgjV family protein [Marinoscillum pacificum].
ACCESSION   WP_258098038
VERSION     WP_258098038.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 73)
  AUTHORS   Drew,D., Sjostrand,D., Nilsson,J., Urbig,T., Chin,C.N., de
            Gier,J.W. and von Heijne,G.
  TITLE     Rapid topology mapping of Escherichia coli inner-membrane proteins
            by prediction and PhoA/GFP fusion analysis
  JOURNAL   Proc Natl Acad Sci U S A 99 (5), 2690-2695 (2002)
   PUBMED   11867724
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022152.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10688.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..73
                     /product="YgjV family protein"
                     /calculated_mol_wt=8132
ORIGIN      
        1 miieitgyva iafsllamaq kdmiklrvfh llsailyivy glhlaaypiv lgaitfliih
       61 iwhlykltfs nng
//
LOCUS       WP_258098040             630 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Marinoscillum pacificum].
ACCESSION   WP_258098040
VERSION     WP_258098040.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 630)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 630)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 630)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 630)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..630
                     /product="ATP-binding protein"
                     /calculated_mol_wt=71809
     Region          75..300
                     /region_name="HisJ"
                     /note="ABC-type amino acid transport/signal transduction
                     system, periplasmic component/domain [Amino acid transport
                     and metabolism, Signal transduction mechanisms]; COG0834"
                     /db_xref="CDD:440596"
     Region          <344..>372
                     /region_name="JMTM_Notch_APP"
                     /note="juxtamembrane and transmembrane (JMTM) domain found
                     in Notch and APP family proteins; cl41775"
                     /db_xref="CDD:425406"
     Site            order(347..348,350..351,353..359,363..368)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:411983"
     Region          394..630
                     /region_name="KdpD"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; COG2205"
                     /db_xref="CDD:441807"
ORIGIN      
        1 mikpdgsgni hyqfipihsn pvacfviieh fnhmvrlalf lpltmlfsav gaqsweeaqk
       61 thaasldlaw ytsrpfieev ngemkgiead mmlefqeflk eryqvqltin wiedvnfpgi
      121 mnrvktsnqp nvfgisafsi teeraremkf tkpylpditv lvssegtpiv stlediedfm
      181 idkvavtiks ttyehmlfdl knqlgatfkm eyipsgdnil eaiakadnrf gfidlpiylk
      241 liqnggsltr qnfftirgdg ygiimplhsd wdvpfneflk dlkygprvee siskylgeel
      301 yraideiyns eslstsiltk ekelqnqlir nanqeleqeq svkkyliigm iiilfflivv
      361 ivlylknrks krelsyqkrq iekqqkaiai kneqltnrnn qlisineekn nlvsilahdm
      421 rsplgqiigl agalksqlen vdddhmemvg qigksayrln qmitkmlden sldkheilhe
      481 pvyvsqlled ivkryglvsn kknieielnp cshqyiistd hllllqvlen lmsnavkfsp
      541 vnskivisae ckeeevvfqi qdqgpgftes dkqmmfaryq klsakptage sstglglsiv
      601 kkyveqlkgn lklesepnrg scffvtipks
//
LOCUS       WP_258098046             626 aa            linear   BCT 02-MAR-2025
DEFINITION  sodium:solute symporter family transporter [Marinoscillum
            pacificum].
ACCESSION   WP_258098046
VERSION     WP_258098046.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012686.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00474.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..626
                     /product="sodium:solute symporter family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /note="Members of the Solute:Sodium Symporter (SSS), TC
                     2.A.21 as described in tcdb.org, catalyze solute:Na+
                     symport. Known solutes for members of the family include
                     sugars, amino acids, nucleosides, inositols, vitamins,
                     urea or anions, depending on the system.; Members of the
                     Solute:Sodium Symporter (SSS), TC 2.A.21 as described in
                     tcdb.org, catalyze solute:Na+ symport. Known solutes for
                     members of the family include sugars, amino acids,
                     nucleosides, inositols, vitamins, urea or anions,
                     depending on the system.; Members of the Solute:Sodium
                     Symporter (SSS), TC 2.A.21 as described in tcdb.org,
                     catalyze solute:Na+ symport. Known solutes for members of
                     the family include sugars, amino acids, nucleosides,
                     inositols, vitamins, urea or anions, depending on the
                     system."
                     /calculated_mol_wt=67929
     Region          9..626
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     Site            order(57,60,370,373..374)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271356"
ORIGIN      
        1 mgfltldyvv fgaycvvima iglylsrdek ghektandyf lagnslswwa igasliaani
       61 saehfigmsg sgfavgigia ayewlaavtl ilvakfllpq minnkiytip qfakerygkg
      121 vsfffsffwl lvyifvnlts vawlgalame eilgwpmvyg vpgllifagi ysiygglkav
      181 awtdviqvvf lvggglitaf falsavagdd ggaiegfmiv lnkvrevpsd lhfsmileeg
      241 vasipdgsgg tkdpyidlpg lavifgamwl inigywgfnq yiiqkglaak slqeakrgli
      301 fagflkilip iivivpgita yvmfnhpdls hsieglsgti dkadqaypwl lrnfaptgir
      361 glafaaliaa vvsslasmln ststiftldi ykdiinpeas qtqlvkigri aafvalviav
      421 faakpllggl dqafqyiqey tgfiypgvvv vfgmgilwkr atnraalwtt iatlpvgiaf
      481 klllpdlpfi irmgyvcmvl islaliltlt dsnqvatkea sedkkkkfrq aglifgaaga
      541 ltlvlgllfg tewfgmsmrn lgfhsifmlt fmmaflsiim ytnansskqd akaytiepel
      601 fktdktfflg amgivviiva lyavfw
//
LOCUS       WP_258098053             282 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Marinoscillum
            pacificum].
ACCESSION   WP_258098053
VERSION     WP_258098053.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 282)
  AUTHORS   Coquille,S., Roux,C., Fitzpatrick,T.B. and Thore,S.
  TITLE     The last piece in the vitamin B1 biosynthesis puzzle: structural
            and functional insight into yeast
            4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate (HMP-P)
            synthase
  JOURNAL   J Biol Chem 287 (50), 42333-42343 (2012)
   PUBMED   23048037
REFERENCE   2  (residues 1 to 282)
  AUTHORS   Wightman,R. and Meacock,P.A.
  TITLE     The THI5 gene family of Saccharomyces cerevisiae: distribution of
            homologues among the hemiascomycetes and functional redundancy in
            the aerobic biosynthesis of thiamin from pyridoxine
  JOURNAL   Microbiology (Reading) 149 (Pt 6), 1447-1460 (2003)
   PUBMED   12777485
REFERENCE   3  (residues 1 to 282)
  AUTHORS   Rodriguez-Navarro,S., Llorente,B., Rodriguez-Manzaneque,M.T.,
            Ramne,A., Uber,G., Marchesan,D., Dujon,B., Herrero,E.,
            Sunnerhagen,P. and Perez-Ortin,J.E.
  TITLE     Functional analysis of yeast gene families involved in metabolism
            of vitamins B1 and B6
  JOURNAL   Yeast 19 (14), 1261-1276 (2002)
   PUBMED   12271461
REFERENCE   4  (residues 1 to 282)
  AUTHORS   Maundrell,K.
  TITLE     nmt1 of fission yeast. A highly transcribed gene completely
            repressed by thiamine
  JOURNAL   J Biol Chem 265 (19), 10857-10864 (1990)
   PUBMED   2358444
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020650.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09084.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..282
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=31367
     Region          3..270
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mhkftiggvp eyfnlpilna iatgdlekad iklrwetvke gtgamskmlh dgdldiamil
       61 legatksild gqrikiikdy vsspltwgvh tspfvnsvde lyarrvgisr ygsgshmmaf
      121 lmaeqygwpk eslefvvinn ldgaidafak qeidiflwek fttkpfvdag qmnridtvat
      181 pwpcfvlaan artmaayske vkkicqlinh qasvlmsdks lseliskdyg ltsddsklit
      241 qevkwstate vdetaiqkvm dtyrelkvik stqdtkslia lv
//
LOCUS       WP_258098159            1244 aa            linear   BCT 02-MAR-2025
DEFINITION  T9SS type A sorting domain-containing protein [Marinoscillum
            pacificum].
ACCESSION   WP_258098159
VERSION     WP_258098159.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 1244)
  AUTHORS   Veith,P.D., Nor Muhammad,N.A., Dashper,S.G., Likic,V.A.,
            Gorasia,D.G., Chen,D., Byrne,S.J., Catmull,D.V. and Reynolds,E.C.
  TITLE     Protein substrates of a novel secretion system are numerous in the
            Bacteroidetes phylum and have in common a cleavable C-terminal
            secretion signal, extensive post-translational modification, and
            cell-surface attachment
  JOURNAL   J Proteome Res 12 (10), 4449-4461 (2013)
   PUBMED   24007199
REFERENCE   2  (residues 1 to 1244)
  AUTHORS   Glew,M.D., Veith,P.D., Peng,B., Chen,Y.Y., Gorasia,D.G., Yang,Q.,
            Slakeski,N., Chen,D., Moore,C., Crawford,S. and Reynolds,E.C.
  TITLE     PG0026 is the C-terminal signal peptidase of a novel secretion
            system of Porphyromonas gingivalis
  JOURNAL   J Biol Chem 287 (29), 24605-24617 (2012)
   PUBMED   22593568
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039201.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18962.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1244
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..1244
                     /product="T9SS type A sorting domain-containing protein"
                     /GO_component="GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /calculated_mol_wt=139490
     Region          <54..>945
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          <1155..1231
                     /region_name="T9SSA_dep_M36"
                     /note="T9SS-dependent M36 family metallopeptidase;
                     NF038113"
                     /db_xref="CDD:468356"
ORIGIN      
        1 mnnkltpyqn lsrvtlglll mmllstalna ktvaadsicn aeytyridsv gnipvytfsa
       61 typnnqytye wniggslirt gstiehifnd aggwgvtlta fsatdtctsy qnvgampppe
      121 decffntwqi ndstyavetw lpmfwedmss tidfgdgtvv ahepvhgehi thtydsagty
      181 ticqtmgand csyckeiefe lstiptcnad ftytidstgn ipvytfsain pnnqysyewk
      241 fneglprtga siehifadwd dwtggefdvt ltsynqtdtc stiqtikaef ppfdvcffnt
      301 wqiddstyai etslpmywed msssvdfgdg tviayepeig eyithsynkp gtyticqtmd
      361 tddcsyckev svgtastecp ttfnyelids lngeyeyhfs pleidstary iwtfdlneet
      421 eaftanytft tpgthevnlq iytdnsfcdl seyidieenv episcptsfn yeidslnsli
      481 yafypteids aasytwkids idvstnasft yqfeeagqyv vnlsinkgds lcnlaevinv
      541 essevpitcp ssfnyqvdsl ntleysfgve eydtaatsys wfineeqvgy eayfnytfpe
      601 gglysvdlli aydaseclvs dsilveapid sitcttsfny qvdslntley sfgvdeydta
      661 attyswfine eqvgyeayfn ytfpegglys vdlliaydtf eclvsdsilv eapidsiicp
      721 tsfnyqmdsl ntleysfgve eydtaattys wfineeqvgf eayfnytfpe gglysvdlli
      781 aydaseclvs dsilveapid siicptsfny hvdslntlny sfgveeydta attyswfine
      841 eqvgyeayfn ytfpksglys vdlfiaydas eclvsdsilv eapldslvcp tsfnavlvds
      901 lntlnyqfsp leidnsasyl wavdgaiste avytynfpsa gnydvtlttv keqdtcevtq
      961 tiavmagtlh iqgmlyadlv pvvdgsllly qeidnrwtys nqvsttnghf ifenlapgty
     1021 llhgmgdrti heafiptyfv ngvswkdafe ieltgsaeel kitlikaqgl tnghgrirat
     1081 mnthdfdsqi vllkdrnsne tvkwtisegd qfsfsqlplg ayritmemps esfsmnvdvt
     1141 dnqpevnlnl dmfnilssdd vaqkelivyp tavenevfih npspssselt ikvismtgqk
     1201 vlsrsvkias ngtyqlslsn ldrgmyiilt edseghknny riqk
//
LOCUS       WP_258098188             468 aa            linear   BCT 02-MAR-2025
DEFINITION  serine hydrolase [Marinoscillum pacificum].
ACCESSION   WP_258098188
VERSION     WP_258098188.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012371.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00144.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..468
                     /product="serine hydrolase"
                     /calculated_mol_wt=52885
     Region          28..>67
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
     Region          131..441
                     /region_name="AmpC"
                     /note="CubicO group peptidase, beta-lactamase class C
                     family [Defense mechanisms]; COG1680"
                     /db_xref="CDD:441286"
ORIGIN      
        1 mmkstyllil visvtlisck edlpsskisg vlidkyskdp vanatilvle ngpsitsesd
       61 gsfsfdnssl idieemding slfaavriqh edyrpievni qlnskseigl tdkelptyyy
      121 nqpvqlnddi ptgplsessl drqtiqllme nivqdeykel hsilvykdda lvledyffgn
      181 ndtidfennv ivdkqptpiq wdrttphyia svnkaltstl tgialdqqnl stsstikdyl
      241 peyasyfade nkasvtfesc ltmttgfqwd ewssndlall wksedfgdfv lsrdnmgigt
      301 ewrynsaipn lllksienvt genvrdwaqe nfydklgitn fkwqsqpdgt pegsariylt
      361 prdmlkvgit ylsegkwkge qvipadyvae cfeikentts gdysyyfwir elngvkylsa
      421 egdggnyini fpeqnmvivi tqglylkwps yvtqandimg nyilpaie
//
LOCUS       WP_258098171             444 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3526 domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258098171
VERSION     WP_258098171.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023464.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12040.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..444
                     /product="DUF3526 domain-containing protein"
                     /calculated_mol_wt=50895
     Region          <124..247
                     /region_name="NosY"
                     /note="ABC-type transport system involved in multi-copper
                     enzyme maturation, permease component [Posttranslational
                     modification, protein turnover, chaperones]; COG1277"
                     /db_xref="CDD:440888"
     Region          267..405
                     /region_name="DUF3526"
                     /note="Domain of unknown function (DUF3526); pfam12040"
                     /db_xref="CDD:432281"
ORIGIN      
        1 mfrqflrtkt ciiglslllv lgtislligk qflteqqeva hqvvekqadh iarnveyhsd
       61 dlglllyyle falindpspl aglsigqrdi npsvqsvtir tleaqkydtd llnpvkllyg
      121 nldlsfiliy vlplliiaft ynllseeees gtwrmirvmt rskikfllak lsvrfvllft
      181 vvltlfilav glldipvgqp llaffsvail ymvfwfalsf wiislqrnsn fnaltllsiw
      241 ltlmilvpaa lnnyltvnhp ipealtatiq qrdgyhekwd tnkeetleaf ytaypqykky
      301 gyptedgfnw lwyyamqhlg dvesheqsva mrdkilkreh iselwsrfvp tmhaqlalnr
      361 lagtglinhi hflqetsdfh ertrlyfypq ifdqagaeav nwasfkpehm ttvteinwws
      421 tlgslvigal vftglafvqs rsvl
//
LOCUS       WP_258098289              83 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6364 family protein [Marinoscillum pacificum].
ACCESSION   WP_258098289
VERSION     WP_258098289.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039417.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19891.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..83
                     /product="DUF6364 family protein"
                     /calculated_mol_wt=9360
     Region          1..83
                     /region_name="DUF6364"
                     /note="Family of unknown function (DUF6364); pfam19891"
                     /db_xref="CDD:466224"
ORIGIN      
        1 mdakvtlsfd kevikkakay assqgislsr lteilyrria enqyssiedl pvadwvnmva
       61 egaaeykpkk pslkneyyes rkk
//
LOCUS       WP_258098302             472 aa            linear   BCT 02-MAR-2025
DEFINITION  RICIN domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258098302
VERSION     WP_258098302.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025563.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14200.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..472
                     /product="RICIN domain-containing protein"
                     /calculated_mol_wt=52284
     Region          22..234
                     /region_name="Glyco_hydro_12"
                     /note="Glycosyl hydrolase family 12; cl03302"
                     /db_xref="CDD:413657"
     Region          245..374
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cd00161"
                     /db_xref="CDD:467293"
     Site            order(258..260,270,272,279..280)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(304,316,318,325..326)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(350,351,362,364,371..372)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Region          400..471
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mkkvltlfmm lgiflhqfns naqilqscdq wantsvngyn iynniwgang gsqcmtayae
       61 ddwyvdanht gggiksypns ekqlsvnvdn mgqisssfnv srpsggsyss aydiwydnya
      121 yeimlwmnyt gsvgpisyny gcngypstac peatnvnvgg htwniyrgnn ggnevfsflr
      181 tsntnsgtvd itaisqwlrn ngwfgnanlh siqfgfeitn tsgtqrfein dfsvntgsgg
      241 gsssyvqfrn rntglyldgm grttngaavg qygntshvns qwelvsqggn yyqlrnrgtg
      301 lyldgmgrtt ngsdcgqwsn ttlynshwel lqysgnyyrl rnrttglyld gmgrtsngsn
      361 cgqwsntthp naqweminss gsredlsiva mgaknepill ypnpaqhdih lnleessfqk
      421 mevidmtgrk isdkaiesnv vdlnitnlks ghymirlsgq dgtitkrffk qd
//
LOCUS       WP_258098323             278 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-binding protein [Marinoscillum pacificum].
ACCESSION   WP_258098323
VERSION     WP_258098323.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13460.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..278
                     /product="NAD(P)H-binding protein"
                     /calculated_mol_wt=30491
     Region          6..258
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(9,11..12,14,33..35,61..63,93..95,120..123)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mstktlvigg tgktgrkvva klqalgeevr igsrngfpaf dwqdqsgwsd alqgitqvyi
       61 tfqpdlavpg aldaieglvk eakksgvqkl vllsgkgere aelceqvvih sgldytivra
      121 swfmenfses ffldpilagh valpkpeakv pyvstddiae vvvkaltedh ngqlyeltga
      181 elltfeqvin kideasgrni aftpislsay vtmleehqvp kdyiwlinyl ftevlgtegn
      241 dvvtqdiekv lnrpatsfdq yvkntvktgv wnpevtvq
//
LOCUS       WP_258098473             185 aa            linear   BCT 02-MAR-2025
DEFINITION  sterol desaturase family protein [Marinoscillum pacificum].
ACCESSION   WP_258098473
VERSION     WP_258098473.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 185)
  AUTHORS   Zhu,G., Koszelak-Rosenblum,M., Connelly,S.M., Dumont,M.E. and
            Malkowski,M.G.
  TITLE     The Crystal Structure of an Integral Membrane Fatty Acid
            alpha-Hydroxylase
  JOURNAL   J Biol Chem 290 (50), 29820-29833 (2015)
   PUBMED   26515067
REFERENCE   2  (residues 1 to 185)
  AUTHORS   Lagarde,D. and Vermaas,W.
  TITLE     The zeaxanthin biosynthesis enzyme beta-carotene hydroxylase is
            involved in myxoxanthophyll synthesis in Synechocystis sp. PCC 6803
  JOURNAL   FEBS Lett 454 (3), 247-251 (1999)
   PUBMED   10431816
REFERENCE   3  (residues 1 to 185)
  AUTHORS   Husselstein,T., Schaller,H., Gachotte,D. and Benveniste,P.
  TITLE     Delta7-sterol-C5-desaturase: molecular characterization and
            functional expression of wild-type and mutant alleles
  JOURNAL   Plant Mol Biol 39 (5), 891-906 (1999)
   PUBMED   10344195
REFERENCE   4  (residues 1 to 185)
  AUTHORS   Mitchell,A.G. and Martin,C.E.
  TITLE     Fah1p, a Saccharomyces cerevisiae cytochrome b5 fusion protein, and
            its Arabidopsis thaliana homolog that lacks the cytochrome b5
            domain both function in the alpha-hydroxylation of
            sphingolipid-associated very long chain fatty acids
  JOURNAL   J Biol Chem 272 (45), 28281-28288 (1997)
   PUBMED   9353282
REFERENCE   5  (residues 1 to 185)
  AUTHORS   Bard,M., Bruner,D.A., Pierson,C.A., Lees,N.D., Biermann,B.,
            Frye,L., Koegel,C. and Barbuch,R.
  TITLE     Cloning and characterization of ERG25, the Saccharomyces cerevisiae
            gene encoding C-4 sterol methyl oxidase
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 186-190 (1996)
   PUBMED   8552601
REFERENCE   6  (residues 1 to 185)
  AUTHORS   Aarts,M.G., Keijzer,C.J., Stiekema,W.J. and Pereira,A.
  TITLE     Molecular characterization of the CER1 gene of arabidopsis involved
            in epicuticular wax biosynthesis and pollen fertility
  JOURNAL   Plant Cell 7 (12), 2115-2127 (1995)
   PUBMED   8718622
REFERENCE   7  (residues 1 to 185)
  AUTHORS   Arthington,B.A., Bennett,L.G., Skatrud,P.L., Guynn,C.J.,
            Barbuch,R.J., Ulbright,C.E. and Bard,M.
  TITLE     Cloning, disruption and sequence of the gene encoding yeast C-5
            sterol desaturase
  JOURNAL   Gene 102 (1), 39-44 (1991)
   PUBMED   1864507
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016041.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04116.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..185
                     /product="sterol desaturase family protein"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_process="GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=21949
     Region          <23..182
                     /region_name="FA_hydroxylase"
                     /note="Fatty acid hydroxylase; cl01132"
                     /db_xref="CDD:412761"
ORIGIN      
        1 mekltrthis ipvtmhsiiv itfcyfafrq vawqtviglf fagwltwtla eywvhryvyh
       61 vhtekkwllk iqhmghgihh qypkdptrla mppvpallll slfyglfwla lgnlaiaffp
      121 gfvfgyllyi sihyaqhrfk tpkffmfkrl wkyhamhhyk ypedkafgvs tllwdvvfgt
      181 lpken
//
LOCUS       WP_258098521             234 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3823 domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258098521
VERSION     WP_258098521.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024272.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12866.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..234
                     /product="DUF3823 domain-containing protein"
                     /calculated_mol_wt=25387
     Region          31..123
                     /region_name="DUF3823"
                     /note="Protein of unknown function (DUF3823) N-terminal
                     domain; pfam12866"
                     /db_xref="CDD:432840"
     Region          127..231
                     /region_name="DUF3823_C"
                     /note="Domain of unknown function (DUF3823_C); pfam18003"
                     /db_xref="CDD:465612"
ORIGIN      
        1 mnkilnklsm favalllltg caldnyeepg sflkgrivyq gepigveynq vsfqlwepgw
       61 elsksidvtv sqdgefsall fdaqykliip shqgpfmsie nsgtnsdtii vdlngstemd
      121 ievlpfyvfn sadmsvsgtt vnmsaslnkv vtgvdernid rvnlyiskth fvsgntsvss
      181 aeigggditd ignitlstei pdltpsqsyv yarvgvkisg vedmlfspvq klef
//
LOCUS       WP_258098580             223 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3823 domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258098580
VERSION     WP_258098580.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024272.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12866.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..223
                     /product="DUF3823 domain-containing protein"
                     /calculated_mol_wt=24676
     Region          29..116
                     /region_name="DUF3823"
                     /note="Protein of unknown function (DUF3823) N-terminal
                     domain; pfam12866"
                     /db_xref="CDD:432840"
     Region          119..220
                     /region_name="DUF3823_C"
                     /note="Domain of unknown function (DUF3823_C); pfam18003"
                     /db_xref="CDD:465612"
ORIGIN      
        1 mknyiiyill gtalvfgace ydnyeepqai lygqvvydgq avgvrtngpq lelwqdgyel
       61 sknipifiaq dgtysvslfd geyklvrkag apwlaelsdt iivnvnghte fdvpvtpyfs
      121 lhdetyqvgn ntvsvtftid qvvdaaaiqe vnlylgyavl tdqnknehia gadisnitlg
      181 gqntiqatip ehlkdeeylf vrvgvrsnms gefsytevqk ldi
//
LOCUS       WP_258098589             705 aa            linear   BCT 02-MAR-2025
DEFINITION  tail fiber domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258098589
VERSION     WP_258098589.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 705)
  AUTHORS   Schwarzer,D., Stummeyer,K., Gerardy-Schahn,R. and Muhlenhoff,M.
  TITLE     Characterization of a novel intramolecular chaperone domain
            conserved in endosialidases and other bacteriophage tail spike and
            fiber proteins
  JOURNAL   J Biol Chem 282 (5), 2821-2831 (2007)
   PUBMED   17158460
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025253.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13884.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..705
                     /product="tail fiber domain-containing protein"
                     /calculated_mol_wt=75454
     Region          582..633
                     /region_name="Peptidase_S74"
                     /note="Chaperone of endosialidase; pfam13884"
                     /db_xref="CDD:404724"
     Region          656..>705
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
ORIGIN      
        1 mlkiglplvs ifllytvgiv eaqtslgvnt nspnsnavlh lvspsgnqgl liptlstsqr
       61 lgmdlgasdn glmvydlset qfyfwngsdw stfvqssdad penelqsllf nsnqltlsdd
      121 pgsvvvdfsg wdmdasddfd gdyaslvnkp tiptntselt ndsgfvtsad dadadssnel
      181 qglnfnsnql tlsddpgsvv vdfsgwdmda sddfdgdyan lvnkptiptn tseltndsgf
      241 vtsaddadad ssnelqglnf nsnqltlsnd pgsvvvdfsg wdmdasddfd gdyaslvnkp
      301 tiptntselt ndsgfvtsad dadadssnel qglnftsnql tlsddpgsvv vdfsgwdmda
      361 sddfdgdyas lvnkptiptn tseltndsgy vtsaddadsd ssnelqglnf ssnqltlsdd
      421 pgsvvvdfsg wdmdasddfd gdyaslvnkp tiptntselt ndsgfitsad dadsdssnel
      481 qglnftsnql tlsddpgsvv vdfsgwdmds sddfdgdyts ltslptlgtl aglntvgtte
      541 isdgsvtsdk ladvvtanty tiviggdity nskgqiiatg tsdqrlkkdt vriqnalsrl
      601 kgvkgytyfw kdeslpliqh gfmaqqleay fpdlvrtnvs gmksvnytgm ipvlvealke
      661 qqqeieqlrn eleekdhsis siesklnkle aalslmenqi ktvnq
//
LOCUS       WP_258098593             572 aa            linear   BCT 02-MAR-2025
DEFINITION  SusE domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258098593
VERSION     WP_258098593.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 572)
  AUTHORS   Reeves,A.R., Wang,G.R. and Salyers,A.A.
  TITLE     Characterization of four outer membrane proteins that play a role
            in utilization of starch by Bacteroides thetaiotaomicron
  JOURNAL   J Bacteriol 179 (3), 643-649 (1997)
   PUBMED   9006015
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025650.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14292.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..572
                     /product="SusE domain-containing protein"
                     /calculated_mol_wt=61973
     Region          25..132
                     /region_name="SusE"
                     /note="SusE outer membrane protein; pfam14292"
                     /db_xref="CDD:433843"
     Region          161..258
                     /region_name="CBM_SusE-F_like"
                     /note="carbohydrate-binding modules from Bacteroides
                     thetaiotaomicron SusE, SusF and similar proteins; cl28889"
                     /db_xref="CDD:475118"
     Site            order(170,197,199,206,209)
                     /site_type="other"
                     /note="starch binding site [chemical binding]"
                     /db_xref="CDD:240562"
     Region          265..362
                     /region_name="CBM_SusE-F_like"
                     /note="carbohydrate-binding modules from Bacteroides
                     thetaiotaomicron SusE, SusF and similar proteins; cl28889"
                     /db_xref="CDD:475118"
     Site            order(274,301,303,310,313)
                     /site_type="other"
                     /note="starch binding site [chemical binding]"
                     /db_xref="CDD:240562"
     Region          370..462
                     /region_name="CBM_SusE-F_like"
                     /note="carbohydrate-binding modules from Bacteroides
                     thetaiotaomicron SusE, SusF and similar proteins; cl28889"
                     /db_xref="CDD:475118"
     Site            order(380,407,409,417,420)
                     /site_type="other"
                     /note="starch binding site [chemical binding]"
                     /db_xref="CDD:240562"
     Region          475..572
                     /region_name="CBM_SusE-F_like"
                     /note="carbohydrate-binding modules from Bacteroides
                     thetaiotaomicron SusE, SusF and similar proteins; cl28889"
                     /db_xref="CDD:475118"
     Site            order(484,512,514,522,525)
                     /site_type="other"
                     /note="starch binding site [chemical binding]"
                     /db_xref="CDD:240562"
ORIGIN      
        1 mklinyikaf vlllvtsiig msceedfeki tikdevaant lantsadsyv ftfesrsevf
       61 nefswdapdf gfeasitytl qmdlgagdfs apttiattqd ltaaptiqsl nntllglgle
      121 pdvasevkfr irsavnanve pvysnvvtts itpylavfpp iyiigdaqgw vlgdalevss
      181 tgpgtyeavg mfvnggkfrm fatpswdaeq wgysyfdggt lpstlidged gdsnfifdgt
      241 sgvykisinl naktitmees elptlyvigd gqgwdlqqaa sleflgggky egtavlqkdg
      301 ffrffekadw natqfgygyf aegslpesft qagdgddnii fagetaeylv tvdlddftvt
      361 ievasaypts lylvgddqsw tfansptftd lgggtfeata dftngatfrf feeldnwsda
      421 ynfdyftevd sdlgavgdad gnfsfngatg tytitvsfsn ksvivepysa ypaalylvgd
      481 dqswtfgnsp aftdmgngvf eatdvtftng atfrffeeld nwtdsfgasy ftggldells
      541 avndnddnms fdgtdgtykv tvdlanktls le
//
LOCUS       WP_258098608             777 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 N-terminal domain-containing protein
            [Marinoscillum pacificum].
ACCESSION   WP_258098608
VERSION     WP_258098608.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 777)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00933.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..777
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=85905
     Region          47..765
                     /region_name="PRK15098"
                     /note="beta-glucosidase BglX"
                     /db_xref="CDD:185053"
ORIGIN      
        1 mlkrfkvvlp fvlmvlcamn slnscqpaeg hqkvsyldaq apvanrvedl lskmtleekv
       61 gqmsqyvglf hlqksadlnt pidlmaddan afypglsgkd lydliktgri gsflhvltak
      121 eanelqkaaq qtrlkiplli gidaihgnal yegatvyptp lslastwdtl lvktiaqqta
      181 remratgshw afspnvdvar dprwgrvget fgedpflvge mgvamvgglq gdrfenpdnv
      241 lacikhfvag sepvnglnas pmdvsertlr evyfppyqka idagaftama ahneingdpc
      301 hgskylltdi lrnemgfegf vvsdwmdier lktvhrvvds qkeacyltvd agmdmhmhgp
      361 dflepvmelv qegrlseeri nqsvrkllea kfrlglfenp fvqedqiats irteahrsta
      421 leaarksivl lkndnllpvk gdvknilitg pnannhtlmg dwsfeqpeen ittvvegfeq
      481 vkpakvklny hdmgmqvtei tsqhiseava kskdndlivv vvgsnslryq skfktngeni
      541 ardnldlvgr qqelvealha tgkpvvvvli ngrplgvewi aenipavvea wepgseggqa
      601 iaevifgkvn psgklpitip rnvgqipsyy nhkrahyvkk ykwsktgply afghglsysq
      661 fqygepvlsd siiksadtvq vtvevtnssk lageevvqly vrdlyssvtr pmkelkgfar
      721 isllpgetkn vtfrldaeaf sfynlnmeqt iesgefwist gsssanedlk ttkltiq
//
LOCUS       WP_258098637             204 aa            linear   BCT 02-MAR-2025
DEFINITION  MCP four helix bundle domain-containing protein [Marinoscillum
            pacificum].
ACCESSION   WP_258098637
VERSION     WP_258098637.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 204)
  AUTHORS   Ulrich,L.E. and Zhulin,I.B.
  TITLE     Four-helix bundle: a ubiquitous sensory module in prokaryotic
            signal transduction
  JOURNAL   Bioinformatics 21 Suppl 3 (Suppl 3), iii45-iii48 (2005)
   PUBMED   16306392
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024140.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12729.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..204
                     /product="MCP four helix bundle domain-containing protein"
                     /calculated_mol_wt=23409
ORIGIN      
        1 miqrrtfskl ksivalvvvf llvlatnlmd kqhfevvera lttvyedrll vkdylfkisr
       61 qlqkkqealh laelaeiqqt nnlsntaids ligkfastam vaheesyfer lkrelavlek
      121 yesellvsdn qgvsseyirq ldeqhlevne ildvlfeiqi kegkrqidys nqaidrsnlm
      181 tkleigalia iglviqiill yrsk
//
LOCUS       WP_258098659             696 aa            linear   BCT 02-MAR-2025
DEFINITION  phospholipase D-like domain-containing protein [Marinoscillum
            pacificum].
ACCESSION   WP_258098659
VERSION     WP_258098659.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13091.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..696
                     /product="phospholipase D-like domain-containing protein"
                     /calculated_mol_wt=80266
     Region          35..164
                     /region_name="PLDc_SF"
                     /note="Catalytic domain of phospholipase D superfamily
                     proteins; cl15239"
                     /db_xref="CDD:472788"
     Site            order(115,117,130,132,143)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197200"
     Site            115
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197200"
ORIGIN      
        1 msilnglsvw eqkpgmngnh rqtseidqrt isnnqeifet isrelkeaqq eilvvaawft
       61 dsdllrilke kaeaglnvqi ivsdnednrk lefdsfpdae snvlrvknvg ygmmhqkycv
      121 idrekaihgs ynwtvnakkn nhesviitnh qqtvdelvkn fenikqrlke iselgledak
      181 aikahfksse vseetepiet krssvevidq rkrdyeqild tmiaaevshy nrseiaaqgy
      241 elakttngdy qilgnafdsv yssfiadida ledkkhrlln rideqrskni qslkenqele
      301 insiskkyet keqvqqaqva tskvliaqnd skidkyqtqe lveiqeqidf ykeeinkqer
      361 dfitpgikwf elipaviinl glfiylflfy ssaayilmfs eldakeeqlr gdtslppevf
      421 npnalgmafd kggtailfil lfvfvpmtla ivgrlkgskk glpewsvwvl ilvvdafiaf
      481 vvsksiheve yltgkadeiw hwlmifgnpn fylvfimgal glflfkfsfd kligifedrn
      541 pqiaelrskk lieqyrekik eykdtyqqke deihqlslan iehlktvqsg eseinqlpey
      601 reaeiarlks etsiiidgit ritdvyvsyi endnylisih avkdristfl egwyrflheq
      661 ysitkannit klsyeaasaw kqeklvsknl dsrikq
//
LOCUS       WP_258098796             334 aa            linear   BCT 02-MAR-2025
DEFINITION  beta galactosidase jelly roll domain-containing protein
            [Marinoscillum pacificum].
ACCESSION   WP_258098796
VERSION     WP_258098796.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 334)
  AUTHORS   Rojas,A.L., Nagem,R.A., Neustroev,K.N., Arand,M., Adamska,M.,
            Eneyskaya,E.V., Kulminskaya,A.A., Garratt,R.C., Golubev,A.M. and
            Polikarpov,I.
  TITLE     Crystal structures of beta-galactosidase from Penicillium sp. and
            its complex with galactose
  JOURNAL   J Mol Biol 343 (5), 1281-1292 (2004)
   PUBMED   15491613
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13364.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..334
                     /product="beta galactosidase jelly roll domain-containing
                     protein"
                     /calculated_mol_wt=38650
     Region          33..>168
                     /region_name="LacZ"
                     /note="Beta-galactosidase/beta-glucuronidase [Carbohydrate
                     transport and metabolism]; COG3250"
                     /db_xref="CDD:442481"
     Region          182..>314
                     /region_name="LacZ"
                     /note="Beta-galactosidase/beta-glucuronidase [Carbohydrate
                     transport and metabolism]; COG3250"
                     /db_xref="CDD:442481"
ORIGIN      
        1 mmkmkrliyl vvlllpylss aqeelkrvvd lrgywkfsig dnprwsnpey ndqswekifv
       61 papwenegfs gfdgyawyri tvdfknisdq nlflvlgfid dvdevylngh lighsgsfpp
      121 nfytaynsyr kyyvpevyln rngknliair vfdtileggi ikgdvgiysd kncpektill
      181 egnwkfkegd sqtwaredfe drdwqdimvp slwrslkkth iqkgvawyrk evtfptkynt
      241 nedlvlvlgk iddfdetyfn gvkigetndh kpygwttsyl qprvydipks likkgepnli
      301 svrvsdlggd agiyngplai ipksklddli lvre
//
LOCUS       WP_258097828              75 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome b5 domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258097828
VERSION     WP_258097828.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 75)
  AUTHORS   Mifsud,W. and Bateman,A.
  TITLE     Membrane-bound progesterone receptors contain a cytochrome b5-like
            ligand-binding domain
  JOURNAL   Genome Biol 3 (12), RESEARCH0068 (2002)
   PUBMED   12537557
REFERENCE   2  (residues 1 to 75)
  AUTHORS   Gerdes,D., Wehling,M., Leube,B. and Falkenstein,E.
  TITLE     Cloning and tissue expression of two putative steroid membrane
            receptors
  JOURNAL   Biol Chem 379 (7), 907-911 (1998)
   PUBMED   9705155
REFERENCE   3  (residues 1 to 75)
  AUTHORS   Meyer,C., Schmid,R., Scriba,P.C. and Wehling,M.
  TITLE     Purification and partial sequencing of high-affinity
            progesterone-binding site(s) from porcine liver membranes
  JOURNAL   Eur J Biochem 239 (3), 726-731 (1996)
   PUBMED   8774719
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012400.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00173.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..75
                     /product="cytochrome b5 domain-containing protein"
                     /calculated_mol_wt=8762
     Region          1..75
                     /region_name="COG4892"
                     /note="Predicted heme/steroid binding protein [General
                     function prediction only]"
                     /db_xref="CDD:443920"
ORIGIN      
        1 mteytrsqla lrngqdrdei wvayqgkifd vtqsrlwrng khyehwagqd ltdelvdaph
       61 tekvfermtq igilv
//
LOCUS       WP_258098853             448 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Marinoscillum pacificum].
ACCESSION   WP_258098853
VERSION     WP_258098853.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 448)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 448)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 448)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 448)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..448
                     /product="ATP-binding protein"
                     /calculated_mol_wt=50533
     Region          24..185
                     /region_name="Crp"
                     /note="cAMP-binding domain of CRP or a regulatory subunit
                     of cAMP-dependent protein kinases [Signal transduction
                     mechanisms]; COG0664"
                     /db_xref="CDD:440428"
     Region          <124..446
                     /region_name="COG4191"
                     /note="Signal transduction histidine kinase regulating
                     C4-dicarboxylate transport system [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443345"
ORIGIN      
        1 medkvsfnwv kqeffsdenk klyvkkgevl ldpqhkntrl flvtkgkflg ylsdaeigny
       61 pvfeasenkf igvysyfsdd hysyskvvav edsevyyydk vreahtpeem qrlsqfhisi
      121 vvnelyarqy fakkmaqerh ndsqrllkae kmstlgqmaa gvahelnnsi gvidgsmgrl
      181 aefinkcvds hgdhhlrdvf etgkkgqeis seeartirkq yekikgltdg qirklsktgi
      241 paneviktlq kdpsaadrin efwemgctlh dmeiaanhst hvvrsvkqlg vtehqwskdv
      301 sinhtiseam vilknltkrv kttvfldeyi pnteacpgql vqvwinlvkn giesmlssqt
      361 edpqiriasg hdakniiitv tdngpgiped ikqrifepsf ttkvdglnfg lglglavvqr
      421 ivtehdavie vnsepghtef tvkiplis
//
LOCUS       WP_258098921             927 aa            linear   BCT 02-MAR-2025
DEFINITION  sugar-binding domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258098921
VERSION     WP_258098921.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 927)
  AUTHORS   Jacobson,R.H., Zhang,X.J., DuBose,R.F. and Matthews,B.W.
  TITLE     Three-dimensional structure of beta-galactosidase from E. coli
  JOURNAL   Nature 369 (6483), 761-766 (1994)
   PUBMED   8008071
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014851.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02837.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..927
                     /product="sugar-binding domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=103832
     Region          32..>463
                     /region_name="LacZ"
                     /note="Beta-galactosidase/beta-glucuronidase [Carbohydrate
                     transport and metabolism]; COG3250"
                     /db_xref="CDD:442481"
ORIGIN      
        1 mrstlpfial lfvvlgcskt depirermll agtwqfqldt gsigeqeqwy nqklgdaivl
       61 pgttdsnekg flntdtttmh lnrqytyaga awyqkevtip esfagkhlel yfertkpskv
      121 wvdgelvgts mllqspqqfe lskklspgvh tltvlinndl kltpfgnvhi ysddtqtnwn
      181 gilgdmyiea kdrtfiadlq vftdinqqqa nvqlglvnel evsnatielq lhlnlngett
      241 qlpttvyeva ldsvitltyd feevalwdey eqpiytvkav lkgegfsdeq satfgmrdft
      301 vsgsqfqing rttflrgkhe savfpltgsa pmdveswarv yriaksygin hyrfhsycpp
      361 eaafiaadqe giylqaelpf wggldndtta qmlrnegygl lkaygnhpsf vmfspgneiw
      421 gghervasnm kalkaydgrp lytmgsnnni gylppqdyae ffvgaripdk gdtitghtrl
      481 thafadayhg galntlkpst qinfnyavah mdlpivshei gqyqiypnyd eitkytgnlk
      541 pwnlevfqqr lqakgmgdld svfqqasgaw salcykaeme aairtkgmag fqlldlqdfp
      601 gqgtalvgil dafmdskgvv spevwkqscn dvvllaefpk ytwsnletfs aelvianysn
      661 knleqpvnws lndeagqslf tgsiesptis hggltslgei tidlasvyqa qkltltille
      721 gtnfsnsypi wvypaadlpp vedmvvtnsl stevmdqltn gasvllfpet eaiedksfag
      781 hfppefwnyg mfkgisewvk kpvspgtlgl lldpehpifa dfptdfhtnw qwysiiknsr
      841 siilddtpan yrplvqvidn lernyklgml fefkvgtgkl lictaqlqdl lhepeanyly
      901 rsivnymqse afdpqqvmsk eelekll
//
LOCUS       WP_258098940             892 aa            linear   BCT 02-MAR-2025
DEFINITION  sialate O-acetylesterase [Marinoscillum pacificum].
ACCESSION   WP_258098940
VERSION     WP_258098940.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 892)
  AUTHORS   Surolia,I., Pirnie,S.P., Chellappa,V., Taylor,K.N., Cariappa,A.,
            Moya,J., Liu,H., Bell,D.W., Driscoll,D.R., Diederichs,S.,
            Haider,K., Netravali,I., Le,S., Elia,R., Dow,E., Lee,A.,
            Freudenberg,J., De Jager,P.L., Chretien,Y., Varki,A.,
            MacDonald,M.E., Gillis,T., Behrens,T.W., Bloch,D., Collier,D.,
            Korzenik,J., Podolsky,D.K., Hafler,D., Murali,M., Sands,B.,
            Stone,J.H., Gregersen,P.K. and Pillai,S.
  TITLE     Functionally defective germline variants of sialic acid
            acetylesterase in autoimmunity
  JOURNAL   Nature 466 (7303), 243-247 (2010)
   PUBMED   20555325
REFERENCE   2  (residues 1 to 892)
  AUTHORS   Bitto,E., Bingman,C.A., McCoy,J.G., Allard,S.T., Wesenberg,G.E. and
            Phillips,G.N. Jr.
  TITLE     The structure at 1.6 Angstroms resolution of the protein product of
            the At4g34215 gene from Arabidopsis thaliana
  JOURNAL   Acta Crystallogr D Biol Crystallogr 61 (Pt 12), 1655-1661 (2005)
   PUBMED   16301800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015585.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03629.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..892
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..892
                     /product="sialate O-acetylesterase"
                     /calculated_mol_wt=100359
     Region          107..>215
                     /region_name="SASA"
                     /note="Carbohydrate esterase, sialic acid-specific
                     acetylesterase; pfam03629"
                     /db_xref="CDD:427409"
     Region          267..>363
                     /region_name="LacZ"
                     /note="Beta-galactosidase/beta-glucuronidase [Carbohydrate
                     transport and metabolism]; COG3250"
                     /db_xref="CDD:442481"
     Region          <430..540
                     /region_name="SASA"
                     /note="Carbohydrate esterase, sialic acid-specific
                     acetylesterase; pfam03629"
                     /db_xref="CDD:427409"
     Region          662..870
                     /region_name="CE4_GLA_like_6s"
                     /note="Putative catalytic NodB homology domain of gellan
                     lyase and similar proteins; cd10967"
                     /db_xref="CDD:200589"
     Site            order(669..670,721,725,774..776,846)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:200589"
ORIGIN      
        1 mmiskdykpl livlfclmat iarseiklpq liqsgmvlqr esivtiwgwa dpgeeiviqf
       61 qrkkhrtstd kggkwslqle tgksggpytm eltgdgsrit lnnillgdvw lcsgqsnmvh
      121 nlgrhqdryr yeidnatnpe irqiiipdhp vlsgpedelk ntswkeanpe nvldftvvgy
      181 ffanhlydqy qvpigiiksa vggtpiqawi sedglkdfpd ltatiqqnkd taylndikkr
      241 vsearksasp psadqglvae ipwysldyqp kgwdrmnipg ywedqgvrdl ngtvwfrkei
      301 evpqtmvgqp aridmgriid sdnvyinger iggtgyqypq rryeikdgil kegknlivvq
      361 vtnnggkggf vpdkpyrlfa gtdtidlkgy wqykvgnvfk pikggyiggi saqnqpsalf
      421 ngmiapftpy kikgvlwyqg esntwrgqay dklmkalisd wrkqwndpel pvfyaqlpny
      481 mdvnylpees swaelrfsqf qalevpntam avtlnlgewn dihpgnkkpi gdrlalaarn
      541 mvyeeqdlvy sgplyksatr egnkiylsfn higdglvsdd geslrwfaia gadkefvwae
      601 aeiegdqviv wseeindpef vryawmdnpa hanffnkngl paspfeasll vkekglwngk
      661 kaavvltydd alevhldnvi peldrkgfkg sfyltasspg sqarlndwkr aaesghelgn
      721 htlyhpcnge grdwispand lsqytteqiv revkmtnvfl qaldgqtert faytcgdtqt
      781 kegsfvnaik defvalrgvd gainkigtmd lnnlncfvad gkgaddfidw veqaktengl
      841 vvilfhgvgg ghsgnvdlee hnrfltylke hqeelwittt leaskhikty qk
//
LOCUS       WP_258098942             541 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Marinoscillum pacificum].
ACCESSION   WP_258098942
VERSION     WP_258098942.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 541)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..541
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=60391
     Region          24..310
                     /region_name="GH43_XynD-like"
                     /note="Glycosyl hydrolase family 43 protein such as
                     Bacillus subtilis arabinoxylan arabinofuranohydrolase
                     (XynD;BsAXH-m23;BSU18160); cd09003"
                     /db_xref="CDD:350117"
     Site            order(98,157,206..207,262)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:350117"
     Region          328..453
                     /region_name="CBM6_xylanase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); many are
                     appended to glycoside hydrolase (GH) family 11 and GH43
                     xylanase domains; cd04084"
                     /db_xref="CDD:271150"
     Site            order(344,354..355,414,447)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:271150"
     Region          470..538
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mkrlialils ifligltqnl kadypvvshr yladpaslvy ngrvylfcsn dndnsatgng
       61 dyrmssivcv sssdlknwtd hgevfrvprd aswanlswap saverdgkfy lyfpngasni
      121 gvavsdrptg pyqdpigkpl idadtpgvqp adniwifdpm tfvdddgray lyfggngenn
      181 mriielnedl istkgeattf fvpkffeaaw mhkrngiyyf systlpetgl ridymtsdnp
      241 ttgftyqgvm sgqppennnn nhhavfefqg kwyqayhnri vareagispn yrrnicldei
      301 lyntdgtiqq mvntedgvsq vgylnpytkv eaetmndqsg ietayfndig mavtnggdgd
      361 wikvrgldfd geitssftgy faglnegssl elrldtetgp ligtveveat gsaqtwqeqt
      421 ieisqnvegv hdlyfifrgg daetlftidy wyfntkptvl saslkqgvsv ypnpardhvn
      481 lifgddarpv ewiirdlsgk vllrgvkage esinvsslqh giymlsvrqd glwnterlri
      541 e
//
LOCUS       WP_258098950             953 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase 115 family protein [Marinoscillum pacificum].
ACCESSION   WP_258098950
VERSION     WP_258098950.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027309.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15979.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..953
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..953
                     /product="glycosyl hydrolase 115 family protein"
                     /calculated_mol_wt=108053
     Region          184..516
                     /region_name="Glyco_hydro_115"
                     /note="Glycosyl hydrolase family 115; pfam15979"
                     /db_xref="CDD:435050"
     Region          <699..762
                     /region_name="BACON_2"
                     /note="Viral BACON domain; pfam19190"
                     /db_xref="CDD:408960"
     Region          775..948
                     /region_name="GH115_C"
                     /note="Gylcosyl hydrolase family 115 C-terminal domain;
                     pfam17829"
                     /db_xref="CDD:436074"
ORIGIN      
        1 mkhlslvalf mismsslfaq efvsfsplkn aftlsepgqq isilvaaedy kgvhrivemf
       61 kkdleevtgn tvkviqkvsd vsgqviivgs tdkssfihql rdskkfktdd legkwekfiv
      121 tsvsqpfegi rnalviagsd krgaifgmfe lsrqigvspw ywwadapivk nssiyikpgr
      181 htkgepdvky rgifindeap altgwvgekf gefgaafysq vfelilrsgg nylwpamwrp
      241 rafsaddpen arladelgvv istshheplm rahdewgred ngawnfqtnk eklnefwkgg
      301 iermgkyesv vtvgmrgdgd eamsedaavp llqeiiaeqr diieevtgkp aaetpqvwai
      361 ykevqdyydq gmrvpedimv lfcddnwgnv rilpkkedlg rsggfgmyyh fdyvggpvsy
      421 rwlnvtqier tweqmnlayd wgvkdlwivn vgdikpmelp isffldfawd astmeakdlp
      481 vyyskwaklq fggeyaeeig eilslytkyn arrtpemlkp dtyslfyyre adrvlaeyqd
      541 llkrsesiye klpashqsaf yqlvlspval canlnemyia agknqaysrq grasanfyad
      601 ktkelffkdd elteayhqnn dgkwnhfmdq vhigyeswnn psndkmpavs yiqvdenpsl
      661 gyvvehgaes rwskgglfsn gfssfdpind qhyylevfnr gggelsyels asedwillsk
      721 tsgkvkyeer ievsikwdkv padvekgqis lkqngsdrty tievpvrqsl petkgfvenn
      781 gvvsipatay sfkqsakeiq wvkvsnmgrt gssmtiepan alqqsigknt plleyeftll
      841 dggdlklkty vsptlnykkn eglkfaisid deepqiinih agetqpdwey pkwwndsvtd
      901 hikkmtsdhs nisagvhtlk vwmidpgvvf qqfvidaggl kssylgppts kmk
//
LOCUS       WP_258098949             265 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase [Marinoscillum pacificum].
ACCESSION   WP_258098949
VERSION     WP_258098949.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13561.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..265
                     /product="SDR family oxidoreductase"
                     /calculated_mol_wt=28341
     Region          20..265
                     /region_name="PRK08277"
                     /note="D-mannonate oxidoreductase; Provisional"
                     /db_xref="CDD:236216"
ORIGIN      
        1 mnfykdkvvv vtggagvlgs smarcfyele aqvvlidrne dalndllkel pnaksfigdv
       61 lnqesitgik dqvikefgrv dvllnvaggn vegatqredq tvfdidsgli dkaiqlnlhg
      121 tiypslvfge miaknenggs iinissmaty saitrvmgys iaksgvnslt qwmacelarn
      181 ygdkvrvnai apgffignqn rklllnpdgs ltsrsekvin ktpmgrfgsi delngavkfl
      241 cgneatfitg vvlpidggfs afsgv
//
LOCUS       WP_258099004             133 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Marinoscillum pacificum].
ACCESSION   WP_258099004
VERSION     WP_258099004.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 133)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..133
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=15465
     Region          9..122
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(101..104,106)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 msrpekleil yvddepanlr sfksafrrly kvhiaehptl ameivkerdl kivvsdhrmp
       61 dlvgtdflke vhayddkikr iilsgfvske elleannsfg lhayipkpwd fedvnatfer
      121 llseeespkm nye
//
LOCUS       WP_258099018             269 aa            linear   BCT 02-MAR-2025
DEFINITION  M48 family metalloprotease [Marinoscillum pacificum].
ACCESSION   WP_258099018
VERSION     WP_258099018.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 269)
  AUTHORS   Quigley,A., Dong,Y.Y., Pike,A.C., Dong,L., Shrestha,L.,
            Berridge,G., Stansfeld,P.J., Sansom,M.S., Edwards,A.M., Bountra,C.,
            von Delft,F., Bullock,A.N., Burgess-Brown,N.A. and Carpenter,E.P.
  TITLE     The structural basis of ZMPSTE24-dependent laminopathies
  JOURNAL   Science 339 (6127), 1604-1607 (2013)
   PUBMED   23539603
REFERENCE   2  (residues 1 to 269)
  AUTHORS   Pryor,E.E. Jr., Horanyi,P.S., Clark,K.M., Fedoriw,N.,
            Connelly,S.M., Koszelak-Rosenblum,M., Zhu,G., Malkowski,M.G.,
            Wiener,M.C. and Dumont,M.E.
  TITLE     Structure of the integral membrane protein CAAX protease Ste24p
  JOURNAL   Science 339 (6127), 1600-1604 (2013)
   PUBMED   23539602
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013594.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01435.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..269
                     /product="M48 family metalloprotease"
                     /EC_number="3.4.24.-"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=29182
     Region          36..246
                     /region_name="Peptidase_M48_M56"
                     /note="Peptidases M48 (Ste24 endopeptidase or htpX
                     homolog) and M56 (in MecR1 and BlaR1), integral membrane
                     metallopeptidases; cl28898"
                     /db_xref="CDD:333718"
     Site            order(131..132,135,187,191)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:320692"
     Site            order(131,135,187)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:320692"
ORIGIN      
        1 mknfkslvif laigvlgtlw scdkngdivl fsiendkqlg aqvaaeiead tsftilsrae
       61 ypeaynylqs mtddilssde vsyrdefawe ihiidddvln afctpggyiy vytglikyle
      121 naddlagvmg heiahadqrh sskqlqrayg iqillsialg eessqlgqiv gqlagtgatl
      181 afsrsaesea ddfsveylad tdyacngaas ffqkllesgq sggpeflsth pspstrvedi
      241 nakaddlgcd ktqisesgft yadfqnslp
//
LOCUS       WP_258099077             508 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Marinoscillum pacificum].
ACCESSION   WP_258099077
VERSION     WP_258099077.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 508)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..508
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=56538
     Region          2..341
                     /region_name="XynB2"
                     /note="Beta-xylosidase [Carbohydrate transport and
                     metabolism]; COG3507"
                     /db_xref="CDD:442730"
     Region          327..505
                     /region_name="GH43_C2"
                     /note="Beta xylosidase C-terminal Concanavalin A-like
                     domain; pfam17851"
                     /db_xref="CDD:436093"
ORIGIN      
        1 mmmrllyvfa vlsmligcgp qlkpvseqrn lipgelpdps iievdgtyyl tgssndwgpv
       61 ypiyqstdlk nwsivtyvfa eqpswtinsf wapelyyrdg kfycyytarr tdgvsgigva
      121 vtdditkgfe dkgqiiewgs eaidafvyed qdklyitwka yglnpdkpit ilgselseng
      181 lslkgavftv leadadgwer ggiegqcivk kgdylymlys gnaccgsgcd ymvgvarsks
      241 ilgpwekyvs npllkgnaqw kcpghgtave vnenwqyvyh ayssegfpnm grtnlisqin
      301 wdsssewpyv dipndstevk lvttdfkdvf dgesinyrwr ydipnnhfta sldsgklrls
      361 etgegnnpsg aslvidpqva dftmqttisq qnnslkglil yvtksnnlgf gvagdslvvw
      421 kvkdgefyel ekiavksvnk idlkadvvda qeimfsykld ndewktikta vsgdnlawws
      481 wgtkaglfvk gaahngegaf defsisyh
//
LOCUS       WP_258099088             396 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF255 domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258099088
VERSION     WP_258099088.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015168.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03190.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..396
                     /product="DUF255 domain-containing protein"
                     /calculated_mol_wt=45515
     Region          32..135
                     /region_name="SoxW"
                     /note="Thioredoxin-related protein SoxW [Posttranslational
                     modification, protein turnover, chaperones]; COG2143"
                     /db_xref="CDD:441746"
ORIGIN      
        1 mtkltsflti vlllslsfss qaqdkgiqfv dmewekvlek skaenklifi tgfvewsepc
       61 avlreytlsd kevgeyynqk finvlvdmed ylglqltdly evqsypvflf idaegnmvhr
      121 gcgaidaadf ltmgevalse snlsimkqkf etgersvdfl teysyaleya cvnktefiet
      181 ffegtdqkdw mteeswtmin lnvsdpyskq iqylmayhdr fsmkygkdtv dakifnvlld
      241 qlisiyeged ltlfatqalr rliseveftd keklvsladl kvndlkenwp ayatnaitvv
      301 eeqevsdpdq lnefswkfyl fiddvaqlet aakwmkgvlq dypdatyydt yaslkfklgd
      361 qkeavkygql alqaaelege dvmhyktqld lfkagk
//
LOCUS       WP_258099120             541 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Marinoscillum pacificum].
ACCESSION   WP_258099120
VERSION     WP_258099120.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024816.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13424.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..541
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=62396
     Region          102..360
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          102..127
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(103..104,107..108,110,140,143..144,147..148,
                     150..151,180,183..184,187..188,191)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          132..168
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          179..207
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          259..287
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          299..323
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <439..526
                     /region_name="PRK10188"
                     /note="transcriptional regulator SdiA"
                     /db_xref="CDD:182292"
     Region          <484..534
                     /region_name="CitB"
                     /note="DNA-binding response regulator, NarL/FixJ family,
                     contains REC and HTH domains [Signal transduction
                     mechanisms, Transcription]; COG2197"
                     /db_xref="CDD:441799"
ORIGIN      
        1 myrsnqdilf friinsmkmh rmllviiacl vahfgysqnq siidslhqel vhaesneerv
       61 evyyalsyew aefsfdsanf haqegflisr kidnpklisl gyssigsayy cqyeldsaig
      121 yydkarevsq qnqdtsglvk atfnigniyl msgkledaln vyeeaqgiyk smgdqmgiar
      181 awnnkalvfr rtkqnemakk alleaidiyk sidepkktyn assnlasiyl lleeydsaiq
      241 vaksnidlar slqnqsyelq plvvigqsfe kleeldssfs yynkarelin eytptsdkvy
      301 vyfglatyyl nkdehrpakp yldslkelgp fdkilnlaip yyemtakfhr lngdlelaya
      361 qrlkyeemkd kyhdqqlidr tteleqvfek ekreleiakl qlenekkslq tvalmiisgl
      421 allaliflvi lfsqrqaknk lkhqllneei eslrlrisri ysevklseie tdikkiqtaf
      481 hndlsereae ilqlavtnkt naeiaesvhl svntvkyhlk niyskigvss rlearqvmse
      541 s
//
LOCUS       WP_258099151             564 aa            linear   BCT 02-MAR-2025
DEFINITION  GMC oxidoreductase [Marinoscillum pacificum].
ACCESSION   WP_258099151
VERSION     WP_258099151.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05199.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..564
                     /product="GMC oxidoreductase"
                     /GO_function="GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /calculated_mol_wt=63205
     Region          11..561
                     /region_name="BetA"
                     /note="Choline dehydrogenase or related flavoprotein
                     [Lipid transport and metabolism, General function
                     prediction only]; COG2303"
                     /db_xref="CDD:441878"
ORIGIN      
        1 mmqdqsntny ydaivvgsgi sggwatkila eggmktlmle rgrmlrhgey ptagldpwdm
       61 pnrgvltpeq nqeynkqtrt gwisfdnkdm fvkdvnnpyd edkrfdwirg yqvggrsitw
      121 grqtyrlsdl dfeanakegi gvdwpirykd lapwydyvek yvgisgqamg lphlpdgqfl
      181 ppmelncveq htkeiiestf dsryltigrv tnltqqhngr gpcqyrnrci rgcpysgyfs
      241 slsstipdae ksgnltiran svvlsviyde stgkasgvri vdaetkethe ffakviflna
      301 saigstsilm nsisdrfpng mgndsdqlgr nlmdhhyrvg amgfidgfed kyykgrrpng
      361 iyiprfrnld eatkrddylr gfgyqggagr agfdqsaytd gygaeykeql mkpgpwsmsl
      421 vgfgemlpdp snrvylnhdk kdpygmptvt fdcefkdnel amrkdmktsa aemleaagfr
      481 dvreyddlga pglgihemgt armghdpkts vlnkwnqvhg aenvfvtdga amtssacqnp
      541 sltymaltar aahyaldqvk kknl
//
LOCUS       WP_258099174             797 aa            linear   BCT 02-MAR-2025
DEFINITION  endonuclease [Marinoscillum pacificum].
ACCESSION   WP_258099174
VERSION     WP_258099174.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 797)
  AUTHORS   Jekel,M. and Wackernagel,W.
  TITLE     The periplasmic endonuclease I of Escherichia coli has amino-acid
            sequence homology to the extracellular DNases of Vibrio cholerae
            and Aeromonas hydrophila
  JOURNAL   Gene 154 (1), 55-59 (1995)
   PUBMED   7867949
REFERENCE   2  (residues 1 to 797)
  AUTHORS   Nakamura,A., Koide,Y., Miyazaki,H., Kitamura,A., Masaki,H.,
            Beppu,T. and Uozumi,T.
  TITLE     Gene cloning and characterization of a novel extracellular
            ribonuclease of Bacillus subtilis
  JOURNAL   Eur J Biochem 209 (1), 121-127 (1992)
   PUBMED   1396690
REFERENCE   3  (residues 1 to 797)
  AUTHORS   Focareta,T. and Manning,P.A.
  TITLE     Extracellular proteins of Vibrio cholerae: molecular cloning,
            nucleotide sequence and characterization of the deoxyribonuclease
            (DNase) together with its periplasmic localization in Escherichia
            coli K-12
  JOURNAL   Gene 53 (1), 31-40 (1987)
   PUBMED   3036665
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016146.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04231.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..797
                     /product="endonuclease"
                     /GO_function="GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /calculated_mol_wt=83502
     Region          65..255
                     /region_name="EndA"
                     /note="Endonuclease I [Replication, recombination and
                     repair]; COG2356"
                     /db_xref="CDD:441923"
     Region          621..694
                     /region_name="GEVED"
                     /note="GEVED domain; pfam20009"
                     /db_xref="CDD:466256"
     Region          720..796
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     pfam18962"
                     /db_xref="CDD:436869"
ORIGIN      
        1 mkklllilsl lgqgvlfaqa psgyynsang ltgealkael nniidghtey sygdlwdllk
       61 vtdrdpnnss nvvgiysrfs mnaaaeyasg agwnrehvwa ksrgdfgtsn gpgtdlhhir
      121 aedvttnsar snkafdnggs pytdsggnys gstpastdsd swypgnnvrg dvarmilyma
      181 vryegengep dleltedvlp ntdkspyhgv esvllawhaa dpvsteemnr nnaiysyqgn
      241 rnpfidhpey vdaiwgsgtg ggggggggtt csdtevtftl vtdnypaets wtlkqgstti
      301 asgsgysnan styteelclt ngtydftind qygdgiccsy gngsyefsss ggtlisggqf
      361 sstetqsfti gssggggggg ggttgnviis eyvegssnnk aieianigss svslsayslk
      421 kqtngagsws talslsgtla aqstyvivys sasstllaka dlttgssvmt fngndpvglf
      481 ennvlsdivg tfnggssnfa qnvtlqrnss vtgpsssysa sqwtsqaqds fdnlgsltsg
      541 stgggggsgg gssmptgycs sqgnnssyey issfslgsis nssgndggyg dytsistnva
      601 kgssysfslt pafpsgayne ylriwidlnr dgdfadsgeq lyssgafqst isgsitipss
      661 asegitkmrv smkyngspts cesfsygeve dyaveivgsg ariansiakt naaiqlttei
      721 ypnpaldfvn lnlkvkqdgi yqirlldlng kvmwqseaks nrntlrgeiq lsnhesglyf
      781 lkisgngqsy esklivn
//
LOCUS       WP_258099177             560 aa            linear   BCT 02-MAR-2025
DEFINITION  1-acyl-sn-glycerol-3-phosphate acyltransferase [Marinoscillum
            pacificum].
ACCESSION   WP_258099177
VERSION     WP_258099177.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 560)
  AUTHORS   Neuwald,A.F.
  TITLE     Barth syndrome may be due to an acyltransferase deficiency
  JOURNAL   Curr Biol 7 (8), R465-R466 (1997)
   PUBMED   9259571
REFERENCE   2  (residues 1 to 560)
  AUTHORS   Bione,S., D'Adamo,P., Maestrini,E., Gedeon,A.K., Bolhuis,P.A. and
            Toniolo,D.
  TITLE     A novel X-linked gene, G4.5. is responsible for Barth syndrome
  JOURNAL   Nat Genet 12 (4), 385-389 (1996)
   PUBMED   8630491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013702.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01553.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..560
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /GO_function="GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=64885
     Region          83..>461
                     /region_name="PlsB"
                     /note="Glycerol-3-phosphate O-acyltransferase [Lipid
                     transport and metabolism]; COG2937"
                     /db_xref="CDD:442180"
ORIGIN      
        1 mrkqkekvry seiiprtqqw pivqlakdrk afigevtnes fdslktitrg rslreelemt
       61 vyreklrmka npwrvdpkde kpfwksiqdr lvdsatlppa eakeieegll reiihryade
      121 iagnfkknsy rfarafitfg farllnatrv kgftslfsrq ldlddkihiv gepehirala
      181 kkgtvvmvpt hfsnldsili gwviqflglp afiygaglnl fnlkifayfm nslgaykvdr
      241 rkknpvylet lktyssmalr rgchslffpg gtrsrsgqie kalklgllst tieaqrimyq
      301 qedaenkakk ifivpvviny nftleapali nehlkrtgqe ryykeadeft tsykiasflf
      361 kfftkgsnis vtigkgmdil gnyvdmeghs ldstgaiihp kdyfisqgei tvdhqreqey
      421 vrilakrive eyhkynrvfa shlvaytafk mmerknpkld lynllripde damidyeefk
      481 tawkklrkri lklekkgkvg vaehmkekan laiehgvanl gmyhaqrplv kkgdkviiqd
      541 mntlyyyhnr megyglekhi
//
LOCUS       WP_258099259             408 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase-fold protein [Marinoscillum pacificum].
ACCESSION   WP_258099259
VERSION     WP_258099259.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 408)
  AUTHORS   Goins,C.M., Dajnowicz,S., Smith,M.D., Parks,J.M. and Ronning,D.R.
  TITLE     Mycolyltransferase from Mycobacterium tuberculosis in covalent
            complex with tetrahydrolipstatin provides insights into antigen 85
            catalysis
  JOURNAL   J Biol Chem 293 (10), 3651-3662 (2018)
   PUBMED   29352107
REFERENCE   2  (residues 1 to 408)
  AUTHORS   van Straaten,K.E., Gonzalez,C.F., Valladares,R.B., Xu,X.,
            Savchenko,A.V. and Sanders,D.A.
  TITLE     The structure of a putative S-formylglutathione hydrolase from
            Agrobacterium tumefaciens
  JOURNAL   Protein Sci 18 (10), 2196-2202 (2009)
   PUBMED   19653299
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012958.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00756.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..408
                     /product="alpha/beta hydrolase-fold protein"
                     /calculated_mol_wt=47354
     Region          20..241
                     /region_name="YbbA"
                     /note="Predicted hydrolase of the alpha/beta superfamily
                     [General function prediction only]; COG2819"
                     /db_xref="CDD:442067"
     Region          307..387
                     /region_name="CpoB"
                     /note="Cell division protein CpoB, coordinates
                     peptidoglycan biosynthesis and outer membrane constriction
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG1729"
                     /db_xref="CDD:441335"
     Region          326..350
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          355..388
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mihkvllltl fssfvfnlag qvhfenhsiy sqsigtamql qvylpqsysg nskdypvvyv
       61 ldgqwfffng vgiqetlrge nvmpemivvg vdfrnrpfrd sllqanwkgv vgfvqndvpn
      121 findkyrtsk eqvlfgweqn aaiaceallt ekspflgaia snggfaneqm wsnqqaskgv
      181 kkylfiansk ydvytrasgy elvnqlekhp lnnlewtfqs fddevheslp yvslyrglry
      241 fyhnysayii adthefterg gmpelkryfq ergerfgldt evsastknml iwlawkqddf
      301 esfqyfmdef kevlttrrya saywqhrlgs yylandhfqe aieyftkgid qypdraylst
      361 myakrgeafa rlgdrvkakk dfkaaisiae eyqedaledy kallkqln
//
LOCUS       WP_258099300              97 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Marinoscillum pacificum].
ACCESSION   WP_258099300
VERSION     WP_258099300.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13751.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         <1..97
                     /product="transposase"
     Region          <1..97
                     /region_name="transpos_IS1182"
                     /note="IS1182 family transposase; NF033551"
                     /db_xref="CDD:468080"
ORIGIN      
        1 akncngcslr gschkskgnr iveinhnlrr hkqnvrqnlf seqglahrsk rpwdveavfa
       61 aikhnrgfrr fmlkgtdkve ieagllaiah nlakkaa
//
LOCUS       WP_258099311             291 aa            linear   BCT 02-MAR-2025
DEFINITION  glycerophosphodiester phosphodiesterase family protein
            [Marinoscillum pacificum].
ACCESSION   WP_258099311
VERSION     WP_258099311.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 291)
  AUTHORS   Kim,H. and Farrand,S.K.
  TITLE     Characterization of the acc operon from the nopaline-type Ti
            plasmid pTiC58, which encodes utilization of agrocinopines A and B
            and susceptibility to agrocin 84
  JOURNAL   J Bacteriol 179 (23), 7559-7572 (1997)
   PUBMED   9393724
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015000.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03009.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..291
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /GO_function="GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=33987
     Region          24..288
                     /region_name="PI-PLCc_GDPD_SF"
                     /note="Catalytic domain of phosphoinositide-specific
                     phospholipase C-like phosphodiesterases superfamily;
                     cl14615"
                     /db_xref="CDD:472694"
     Site            order(29,56,58,156,196,262)
                     /site_type="active"
                     /db_xref="CDD:176510"
     Site            order(29,71)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176510"
ORIGIN      
        1 mryffiilti ifmscnpekk esnfdlqghr gcrglypent ipaflhaidl gvntlemdla
       61 vtddrellvs hepymsaemc ldkqgreisd taqyqyniyq mnyeeiqqfd cgtkphprfp
      121 eqkkmvvnkp llkdviasvn ehlkesgkkh inynieiksq eksddvyhps padfsdlvys
      181 tiddlidwky vtiqsfdfrv lqyfhdkypk vtlalliene lpyeqnldsl gfkpeiyscy
      241 fklltaqtvh dlqdqeikvi pwtvneeedm lhmieigvdg litdypdrfn l
//
LOCUS       WP_258099312             355 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Marinoscillum pacificum].
ACCESSION   WP_258099312
VERSION     WP_258099312.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 355)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..355
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=41989
     Region          31..223
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Site            order(35,37,74,112..113,146,208)
                     /site_type="active"
                     /db_xref="CDD:277317"
     Site            order(35,37,74,112,146,208)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277317"
ORIGIN      
        1 mkitnkivyq nldnlfdasp tfelkegdkw vvfsdlhmgd ggstddfktn aelfktvlge
       61 hylkkdfsli lngdveemqr fklkkilkqw eavydlfdqf hkksrllkti gnhdleldlm
      121 qelpfdyqll egfkfeykgd hlfffhghqa skkfqkhnal igftlkyfan plgiknysva
      181 hsskkqyaie krtyhysayr kvvsiighth rplfeslhkv erlkfkieql irdyandlkh
      241 rteevittik slkkdlkkyy kqnedtnfqn yvyntifhip clfnsgcvig krgitcleie
      301 dgkirlvhwf daninkkhlh ksgykqqqld gtdyhrmvln eetldyiftr ikflt
//
LOCUS       WP_258099335             472 aa            linear   BCT 02-MAR-2025
DEFINITION  rubredoxin [Marinoscillum pacificum].
ACCESSION   WP_258099335
VERSION     WP_258099335.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012522.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00301.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..472
                     /product="rubredoxin"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=54959
     Region          7..58
                     /region_name="NIR_SIR_ferr"
                     /note="Nitrite/Sulfite reductase ferredoxin-like half
                     domain; pfam03460"
                     /db_xref="CDD:377044"
     Region          421..472
                     /region_name="NorV"
                     /note="Flavorubredoxin [Inorganic ion transport and
                     metabolism]; COG1773"
                     /db_xref="CDD:441379"
ORIGIN      
        1 mqvkdlirvf vkggiispgd flkvlliaek lgaqhihfgs rqdilfpake kskeildetf
       61 qaikteyein tfqyqnilss yltldilpgk kwlashiyhy iinqfdyrtk lrvnvvdpsq
      121 slvplftgqv nfiasnqeny wyvylrfkhi qdtpwqmpfl vytedlvkia kaldeieiqe
      181 knwdykqvfe ylndhskvnt qpvtenlvlp ephfpyyegi hrqsdekywl glywrtnqyk
      241 istlkaiaer cieteigkvt ltpwksfvik gilekdrlgw eklmgkfgmn lrhsalelnw
      301 hlpaldqeal dlkfylvrel dkldvstygl tftiktssdi tlftsvviek vengeqdmyn
      361 llysksfnpn ltdyhcyard ihksvlapli velskvyyds lheqqvespk vksirdniek
      421 dmyqcihcqt iydaeygdpe anvaagtsfr elpadyvcpt cggkkegfqk in
//
LOCUS       WP_258099429             849 aa            linear   BCT 02-MAR-2025
DEFINITION  M14 family zinc carboxypeptidase [Marinoscillum pacificum].
ACCESSION   WP_258099429
VERSION     WP_258099429.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012471.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00246.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..849
                     /product="M14 family zinc carboxypeptidase"
                     /GO_function="GO:0004181 - metallocarboxypeptidase
                     activity [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=95273
     Region          124..338
                     /region_name="Peptidase_M14_like"
                     /note="M14 family of metallocarboxypeptidases and related
                     proteins; cl11393"
                     /db_xref="CDD:472171"
     Site            order(134,137,211,220..221,250..251,255,327)
                     /site_type="active"
                     /db_xref="CDD:349427"
ORIGIN      
        1 mkykvvlila ligvtlkgsg qvdlsyylpt tvsyneeipt pkdvlgyevg ewhvshdqli
       61 yymrtlakat drieinefak thegrqlmql iithpsnren leeirkthva ltdpnsgvtp
      121 dqaklvhwmg ysihgneasg snaaliaayy laaaesteie dllkntvivf dpsynpdglq
      181 rfstwvnmhk sanlvsdpas refdevwpgg rtnhywfdln rdwmpvqhpe srgrieqfhy
      241 wkpnvltdhh emgtnstfff qpgilarknp ltpmanvamt ediaayhanm ldsigslyfs
      301 eegfddyyvg kgstypdlng gvgilfeqgs srghlqenqf gkisfpqair nhfvtslstl
      361 kavhemrerl lkmqydfyqe sktmaqndpv kaivfgsked pmrafklmel inqhdisiyp
      421 vkgsikkegr syadgsyvip lsqpqyrlik smfetrtefq dslfydistw tlplaynldy
      481 aelgakdfss snlgvaidqv iapkgevkgi sdyayifepy gyftqraimr lvnegivtei
      541 ihtehvtsdk tyargsivip vgiqrekvea iestikkiae mdgidvyams tglsnsgsdl
      601 gsrnleviek pevailvgdg vssyeagetw hlldtryemr itllpleqvn rdisrynrii
      661 fpsgsyrgin tngidnlkkw vskggvivaw ksggkwladn gisnatyvkp esegtsfkry
      721 vdlentrgaq viggaifeas ldlghpltyg lvnskiplfr dhslmmdksk nsyanpivyt
      781 aspllsgyis eekldqvkst mavtvsqlgr grvinfsdnp nfrafwfgtn klfmnalffg
      841 qtissaaae
//
LOCUS       WP_258099427             348 aa            linear   BCT 02-MAR-2025
DEFINITION  1-acyl-sn-glycerol-3-phosphate acyltransferase [Marinoscillum
            pacificum].
ACCESSION   WP_258099427
VERSION     WP_258099427.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 348)
  AUTHORS   Neuwald,A.F.
  TITLE     Barth syndrome may be due to an acyltransferase deficiency
  JOURNAL   Curr Biol 7 (8), R465-R466 (1997)
   PUBMED   9259571
REFERENCE   2  (residues 1 to 348)
  AUTHORS   Bione,S., D'Adamo,P., Maestrini,E., Gedeon,A.K., Bolhuis,P.A. and
            Toniolo,D.
  TITLE     A novel X-linked gene, G4.5. is responsible for Barth syndrome
  JOURNAL   Nat Genet 12 (4), 385-389 (1996)
   PUBMED   8630491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013702.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01553.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..348
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /GO_function="GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=39849
     Region          10..211
                     /region_name="LPLAT"
                     /note="Lysophospholipid acyltransferases (LPLATs) of
                     glycerophospholipid biosynthesis; cl17185"
                     /db_xref="CDD:473073"
     Site            order(45,48,51,67..70,124..126)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153254"
ORIGIN      
        1 mnahwfyylv kstgwlgsql ffggikilgk dkfptdgavl lapnhqgafm daivagtfak
       61 kpvsfltrad vfnkwtnpil kslnmmpiyr irdgiqslsq ndavfdtcfk mlseervili
      121 fpegnhgkeh ylrpiskgta rlaldardqi dpntkiyivp vginyfshsq plakvflkyg
      181 dpielsqyme iyrehkqkgy ntlkadltqa mkdvlilpen denyekkkew ifqskhesls
      241 fdklkemgrg dhyeevkprk knffvkmlia ffsifnfpal lglkkllgiv kdpvfkvslk
      301 ylgggifhil wwiivytiga ttigweagll fvttcimtmy arqslikf
//
LOCUS       WP_258099510             271 aa            linear   BCT 02-MAR-2025
DEFINITION  UbiA family prenyltransferase [Marinoscillum pacificum].
ACCESSION   WP_258099510
VERSION     WP_258099510.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013226.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01040.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..271
                     /product="UbiA family prenyltransferase"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /calculated_mol_wt=30817
ORIGIN      
        1 mmiqldriyk yfrwlsldiv lgaifflafl eryyqvnlsi hvyfalgsav wliyttdhlm
       61 dgaslanpss drhrfhkryf kwlisagglv lilalvnvyf leidivrnga ivsacsvsyl
      121 llvyffrklw vkeilvalvy sigiylapis mvdsfsyldv ilifqlsgva flnllifsfy
      181 drhsdnkdgf nslvlrlgdy rsrlsivtca mvivlsclvt glgspiqvly llmtailllv
      241 flmpklfnts alyrtigdgi fylpgifvll l
//
LOCUS       WP_258099577            1216 aa            linear   BCT 02-MAR-2025
DEFINITION  cadherin domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258099577
VERSION     WP_258099577.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012258.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00028.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1216
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..1216
                     /product="cadherin domain-containing protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0007156 - homophilic cell adhesion via
                     plasma membrane adhesion molecules [Evidence IEA]"
                     /calculated_mol_wt=132517
     Region          <106..432
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
     Region          <448..880
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
     Region          539..623
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          <673..728
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          737..825
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          938..1021
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          1037..1122
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          1134..1214
                     /region_name="CHU_C"
                     /note="CHU_C Type IX secretion signal domain; pfam13585"
                     /db_xref="CDD:404473"
ORIGIN      
        1 mkkyiilivt lfamlkswaa dpgwsvspas ysysmtvtav ldvncteltn asnrlgafvg
       61 anvrgsvlsa tvvngkyval ltvysntisg edisfkiyde dndqiidatt vlafqddasy
      121 gtpsvpqvir nnhppvnlvl dnldvdenna vgdvignlsv ddedtgdsht ftlvagdgdt
      181 dnasftitgs elklqevanf evkesyeirv eaadaicsie aafvidvnnl netptnltls
      241 nlaidegvsa pftigtlgse dedtdetfty slvagtgdtd ngtfeidgts lvspvtfdfe
      301 tqpsyfirir ttdsggeyfe aefevtvndl nespsnlals gltvdenqda gtavgtlsad
      361 dpdtgevlty afvtgtndna sfqlsgiqls tneifnyeek seytvvisvt dsenvsieet
      421 ftisvvdlee tptnielsnt tvaenndtpl eiatltsedn dadetftytl vagtgdtdna
      481 tfsiegeklv tstafdfetq ssfairlrtt dsaneffeks ftisitdvne tpsnlalstl
      541 sieenqevgt vlgtlsaddp dtdevltyef vegendnasf tlngtelfvn evfsyevkne
      601 ysvtikvtds edvsieetft isiidqeetp tdiqlssetv aeenftplqv aimtstdddt
      661 detftytlvt gdgdtdnttf singdtlfts tkfdfetkss ysirlrttds adeffeksft
      721 ititdvnepp ydlilsstei eenqavgsvl gtlsvsdqda petltfelve dgindnslfe
      781 lvdqeirtke vfnyeikney tlhvkvsdse nqviqetytv sildveeapt aiqlsnsell
      841 egndssvela altstdedld etftytlvag dgdtdnasft iegdrlivst vfdfetkssy
      901 sirirttdsa netyeeafii nvldnseapy dftlsnqein enlpigtvig vldvedddtn
      961 ptvtysftdg ndsdvnafqi vgnelqsavv fdfeqkssys iaviatdndg ltvesswdis
     1021 ilnlnetped leldnrtike dqpigtligy lsvydddkne sitfsltssl gennntlvei
     1081 ideelvtsqv lnfadneeli ievtasdseg asvtaqytie veaisaskfp sidivtpngd
     1141 gindtwtinn vvdyanysvk ifnangqlvf svasnydnew ngnnngvits tgvyyyevln
     1201 ntfpgkkftg tisllk
//
LOCUS       WP_258099615             129 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Marinoscillum pacificum].
ACCESSION   WP_258099615
VERSION     WP_258099615.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 129)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 129)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..129
                     /product="VOC family protein"
                     /calculated_mol_wt=14713
     Region          6..124
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 meftqiketc lyvsdldqsy afyhdklglp liskvpnrhv ffrlgtsvll cfiaeatkge
       61 kelpphfasg kqhiafevak dnynetkekf kvlgieithc qkwpgsyesf yledpdghvl
      121 eivpegmws
//
LOCUS       WP_258099568             349 aa            linear   BCT 02-MAR-2025
DEFINITION  phytase [Marinoscillum pacificum].
ACCESSION   WP_258099568
VERSION     WP_258099568.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 349)
  AUTHORS   Ha,N.C., Oh,B.C., Shin,S., Kim,H.J., Oh,T.K., Kim,Y.O., Choi,K.Y.
            and Oh,B.H.
  TITLE     Crystal structures of a novel, thermostable phytase in partially
            and fully calcium-loaded states
  JOURNAL   Nat Struct Biol 7 (2), 147-153 (2000)
   PUBMED   10655618
REFERENCE   2  (residues 1 to 349)
  AUTHORS   Kerovuo,J., Lauraeus,M., Nurminen,P., Kalkkinen,N. and
            Apajalahti,J.
  TITLE     Isolation, characterization, molecular gene cloning, and sequencing
            of a novel phytase from Bacillus subtilis
  JOURNAL   Appl Environ Microbiol 64 (6), 2079-2085 (1998)
   PUBMED   9603817
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014396.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02333.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..349
                     /product="phytase"
                     /GO_function="GO:0016158 - 3-phytase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=38608
     Region          1..346
                     /region_name="Phy"
                     /note="3-phytase (myo-inositol-hexaphosphate
                     3-phosphohydrolase) [Lipid transport and metabolism];
                     COG4247"
                     /db_xref="CDD:443389"
ORIGIN      
        1 mrysysilvv gllascmskq penaaikpiy vtdsvtydsd dpaiwinkkd panslilgtd
       61 kqeqdggvya fdlkgnlltd rkaypldrpn nvdlaydfvl ngdtidvava tergkgqirv
      121 frvpdlqpvd nggikvfedd slnnqvmgva lykrtadnkl yaivsrkegt tnvdnylyqy
      181 elvsdslgvt gklvrkfgqf sgtkeieaia vdaelgyvyy sdehfgvrky yadpekgnee
      241 laqfgltgfa ddregisiyk tgvktgyiiv sdqgahqfqv faregssenp hlhelittip
      301 vtamssdgse ttsvalgpdf pkglfvamsd nktfeiydwr dlekrilsk
//
LOCUS       WP_258099642             622 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5723 family protein [Marinoscillum pacificum].
ACCESSION   WP_258099642
VERSION     WP_258099642.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040164.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18990.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..622
                     /product="DUF5723 family protein"
                     /calculated_mol_wt=67903
     Region          46..418
                     /region_name="DUF5723"
                     /note="Family of unknown function (DUF5723); pfam18990"
                     /db_xref="CDD:465943"
ORIGIN      
        1 mrsikvlsih lilslvlavs trlsaqtsmg fynmgnatfq ssfynptyip egklfiglpv
       61 lsgvhlninn kfdysdvfvr tetgnkidln gflaslqknn tvsatvdlnl fhvaytarng
      121 mnfslfaner vqtdvlytrq lmqfaiegni shlgetikid ktaasatyfr eigvgfsgai
      181 pklkmnvgar lkylqgiana stsnytaqlt tnnvdyqldl dlegaalrts gvetlqgntt
      241 idpvsylinn ankgvsadfg msmevnryvn fsasivdlgf iswqedikny tipdtvmryg
      301 glnlkepkgl eqnikdslin rfknrvvkts dayttslnpk iytsisyktp iggevvgslg
      361 tryikgkfny lvgagyrhrf gkyfigsasv trlpqqflnv gaglaikggp vqfylaadql
      421 vkfdltkaks fdfrvgmnfi igkrkakssa stsggssikq pktqasansf lgkkvkvkgq
      481 ddiytvikkq drrkqkdytn paadipsegg yyegevisep ipseslrkff ggksdpipse
      541 tkksrgtvks ppipgsnkrv rggksdpipk akrkarggks dpipgskkik rggksdpips
      601 ggkkvksrks spipkgkkkr kn
//
LOCUS       WP_258099320             590 aa            linear   BCT 02-MAR-2025
DEFINITION  type IV pili methyl-accepting chemotaxis transducer N-terminal
            domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258099320
VERSION     WP_258099320.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 590)
  AUTHORS   Piepenbrink,K.H., Maldarelli,G.A., de la Pena,C.F., Mulvey,G.L.,
            Snyder,G.A., De Masi,L., von Rosenvinge,E.C., Gunther,S.,
            Armstrong,G.D., Donnenberg,M.S. and Sundberg,E.J.
  TITLE     Structure of Clostridium difficile PilJ exhibits unprecedented
            divergence from known type IV pilins
  JOURNAL   J Biol Chem 289 (7), 4334-4345 (2014)
   PUBMED   24362261
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025055.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13675.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..590
                     /product="type IV pili methyl-accepting chemotaxis
                     transducer N-terminal domain-containing protein"
                     /calculated_mol_wt=66864
     Region          11..584
                     /region_name="PRK10935"
                     /note="nitrate/nitrite two-component system sensor
                     histidine kinase NarQ"
                     /db_xref="CDD:236800"
     Region          361..584
                     /region_name="ComP"
                     /note="Signal transduction histidine kinase ComP [Signal
                     transduction mechanisms]; COG4585"
                     /db_xref="CDD:443642"
ORIGIN      
        1 mpktrfrrlg lfyiaalggi alsiiisqll iqtsissqqd darvinvagr qrmlsqnisk
       61 lalkieqhkg dsstnfselq haldlwkqsh eglqngnpel glsgnpsrvi rkmfdeveph
      121 ylsilqaagn lfgntdslsi qsnvgiilrh eanfleamdr ivfqydfear ekvidlrske
      181 iylfvisili iglellfift plaktiratv qeltesekas knmtrelskl yeelgksyqd
      241 leavnaepes pslyasmdts gqithlssqf lqvmeyeeee ppqslkelle rsdyrpdfid
      301 gvldllkngk nwsgelrlit epgdfcwlet hlipvtatqe ikliarntth ykeaklksre
      361 inkerieksv keqqyrsali legqeeerkr lsremhdgvg qmlsamklll esfnpsstpm
      421 kmrlndakdl mksiiqevrr vsfnltpssl ddfglvpain kfcdeinavt kpevtfvnet
      481 rfinrldsni etnlyriiqe avnnaikyak ashitvtfsh tinnlnitvv ddgkgfdfsr
      541 versghfeka ghgifnmker tsyiggsfqm etevgkgtki titlsldknd
//
LOCUS       WP_258099674             174 aa            linear   BCT 02-MAR-2025
DEFINITION  LPS assembly lipoprotein LptE [Marinoscillum pacificum].
ACCESSION   WP_258099674
VERSION     WP_258099674.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 174)
  AUTHORS   Sperandeo,P., Lau,F.K., Carpentieri,A., De Castro,C., Molinaro,A.,
            Deho,G., Silhavy,T.J. and Polissi,A.
  TITLE     Functional analysis of the protein machinery required for transport
            of lipopolysaccharide to the outer membrane of Escherichia coli
  JOURNAL   J Bacteriol 190 (13), 4460-4469 (2008)
   PUBMED   18424520
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016290.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04390.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     gene            1..174
                     /gene="lptE"
     Protein         1..174
                     /product="LPS assembly lipoprotein LptE"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /GO_process="GO:0043165 - Gram-negative-bacterium-type
                     cell outer membrane assembly [Evidence IEA]"
                     /calculated_mol_wt=18849
ORIGIN      
        1 mrsiifscci lgiaalagcg vygftgasis pdvktisigt fynnatlgps nmsilfteai
       61 kdyyqqntsl tlvddngdlq legfvadyki tpvsasasgn nsnadfssts rititvscsy
      121 intkddefdf dknfsffvdy dqnstdlase eqafveeifd qiildifnas vanw
//
LOCUS       WP_258099681             544 aa            linear   BCT 02-MAR-2025
DEFINITION  RagB/SusD family nutrient uptake outer membrane protein
            [Marinoscillum pacificum].
ACCESSION   WP_258099681
VERSION     WP_258099681.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 544)
  AUTHORS   Goulas,T., Garcia-Ferrer,I., Hutcherson,J.A., Potempa,B.A.,
            Potempa,J., Scott,D.A. and Gomis-Ruth,F.X.
  TITLE     Structure of RagB, a major immunodominant outer-membrane surface
            receptor antigen of Porphyromonas gingivalis
  JOURNAL   Mol Oral Microbiol 31 (6), 472-485 (2016)
   PUBMED   26441291
REFERENCE   2  (residues 1 to 544)
  AUTHORS   Bolam,D.N. and Koropatkin,N.M.
  TITLE     Glycan recognition by the Bacteroidetes Sus-like systems
  JOURNAL   Curr Opin Struct Biol 22 (5), 563-569 (2012)
   PUBMED   22819666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07980.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..544
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /calculated_mol_wt=61874
     Region          64..500
                     /region_name="SusD"
                     /note="starch binding outer membrane protein SusD;
                     cl21747"
                     /db_xref="CDD:451378"
     Region          287..541
                     /region_name="SusD_RagB"
                     /note="SusD family; pfam07980"
                     /db_xref="CDD:429768"
ORIGIN      
        1 mrkyiksttt flmsicllil agctdldeti yselnkqnfy nnrlevmqga lrpfthmqaw
       61 lvptwrgnyw yhnelsgdqq awpqkgkhgy dggdhfrmhy htwtpeegrl adtwalmwsg
      121 vglinsaied lsgveyqsmg itdeemnaii aelhvlrafh yiklmdlwgn ipivtkvadp
      181 lnpetkpsae vfafieeelt tyvpdllpys eeligrvsat agyamlaely lnaevwagep
      241 mydkciqacn kiidgeaggl nggpslapdi fesfgntnqt arenlfqfay srkggfefiw
      301 qylfsgygnm saalnvsysg wnavvvtptg fdlfddndlr kqewflsgpq yvygtedpil
      361 gteeyadqpl vyvnairres egdftseggm aegeensgar fhkyrsgtvd eesyrenhyi
      421 iyrlteiyfn kaeaimrqng gvatpeavdl inscrqrafd aadwpaeays vatltldely
      481 rergrefvfe gkrrtdmirf dkfittdwwd hsahsdpnke lfpiparqia inpnlkqnpg
      541 yvse
//
LOCUS       WP_258099753            1083 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Marinoscillum pacificum].
ACCESSION   WP_258099753
VERSION     WP_258099753.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 1083)
  AUTHORS   Gao,G., Nara,T., Nakajima-Shimada,J. and Aoki,T.
  TITLE     Novel organization and sequences of five genes encoding all six
            enzymes for de novo pyrimidine biosynthesis in Trypanosoma cruzi
  JOURNAL   J Mol Biol 285 (1), 149-161 (1999)
   PUBMED   9878395
REFERENCE   2  (residues 1 to 1083)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
REFERENCE   3  (residues 1 to 1083)
  AUTHORS   Nygaard,P., Duckert,P. and Saxild,H.H.
  TITLE     Role of adenine deaminase in purine salvage and nitrogen metabolism
            and characterization of the ade gene in Bacillus subtilis
  JOURNAL   J Bacteriol 178 (3), 846-853 (1996)
   PUBMED   8550522
REFERENCE   4  (residues 1 to 1083)
  AUTHORS   Lollier,M., Jaquet,L., Nedeva,T., Lacroute,F., Potier,S. and
            Souciet,J.L.
  TITLE     As in Saccharomyces cerevisiae, aspartate transcarbamoylase is
            assembled on a multifunctional protein including a
            dihydroorotase-like cryptic domain in Schizosaccharomyces pombe
  JOURNAL   Curr Genet 28 (2), 138-149 (1995)
   PUBMED   8590465
REFERENCE   5  (residues 1 to 1083)
  AUTHORS   Jabri,E., Carr,M.B., Hausinger,R.P. and Karplus,P.A.
  TITLE     The crystal structure of urease from Klebsiella aerogenes
  JOURNAL   Science 268 (5213), 998-1004 (1995)
   PUBMED   7754395
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01979.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..1083
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=120217
     Region          4..>517
                     /region_name="COG4946"
                     /note="Uncharacterized N-terminal domain of tricorn
                     protease, contains WD40 repeats [Function unknown]"
                     /db_xref="CDD:443973"
     Region          82..122
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          641..1036
                     /region_name="HutI"
                     /note="Imidazolonepropionase or related amidohydrolase
                     [Secondary metabolites biosynthesis, transport and
                     catabolism]; COG1228"
                     /db_xref="CDD:440841"
ORIGIN      
        1 mnikntismm lcllaigaya qnwdvtqpve dytettisvd egtwmnldvs pdgqkivfdl
       61 lgdiyimpis ggdatplrtg payevqprfs pdgkqisfts dagggdniwv mnvdgtdakq
      121 itkesfrlln navwtpdgqy liarkhftsg rslgagemwm yhitagsgiq ltkrkndqqd
      181 agepwvagdy vyysedvypg gyfqynkdpn sqiyvikryn rkdgetetii sgpggavrpq
      241 vspdgkklaf vrrvrtksvl ylhdfatgtq kpvydelykd qqeawaifgv ypnynwlpdn
      301 khviiyangk ikklntetgv asvipfkata thkiteppmf kqnpapetfe snvirnasts
      361 pdgktlvfna agyvytkklp ngkpkrltsg adfeyeptfs pdgksivyvt wndeqkgaim
      421 kvtssggtpt klssekglyr tptyspdgks ivykkdggdg slghsyghkp giymisstgg
      481 sqkfitehgd npkftkdgdr iylqtggylf gslnksyksv dlnggnekth fhstyanqya
      541 vspdgkwlaf gelydvyimp fshhgqtfel tgstmslpvt kvtddaginl hwskdsdqlm
      601 wtlgndyysv dlnqtftfle gspdsigdmn kkklevglel ttdvpdgiia ftgakvvtmk
      661 gdeiigngvv vvegnkilsv gksgevtips kakvidvngk vimpgivdth ahlrafrygm
      721 spqkdwayya nlafgittth dpsansetal sqsemvktgr mvgprifstg tilygaegdf
      781 kavinsynda ysaikrtkay gtfsvksynq prreqrqqii kaakeleimv ypeggstffh
      841 nmsmildght siehnipvap lyedvlqlws asktantptl ivnygglnge yywyqntevw
      901 nnkkllkytp riivdsrsrh rtmapqeeyd nghilvsqsi kkmvdrgvkv cvgghgqlqg
      961 lgvhwemwnl sqggmtnmev lraatlhgae yigmgddlgs levgkladli ildkdptedi
     1021 rnsefvshtm vngrlyetat mneignsekp rskfyweqeg yndnfpwhee shsfqaihcs
     1081 cqh
//
LOCUS       WP_258099803             313 aa            linear   BCT 02-MAR-2025
DEFINITION  pectinesterase family protein [Marinoscillum pacificum].
ACCESSION   WP_258099803
VERSION     WP_258099803.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013276.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01095.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..313
                     /product="pectinesterase family protein"
                     /GO_function="GO:0030599 - pectinesterase activity
                     [Evidence IEA]"
                     /GO_process="GO:0042545 - cell wall modification [Evidence
                     IEA]"
                     /calculated_mol_wt=34850
     Region          10..311
                     /region_name="PemB"
                     /note="Pectin methylesterase and related acyl-CoA
                     thioesterases [Carbohydrate transport and metabolism,
                     Lipid transport and metabolism]; COG4677"
                     /db_xref="CDD:443713"
ORIGIN      
        1 mkniisvltl litisccgqy ateitvdqtg hgdftsiqea iyatkafpek ditilikngv
       61 ykekvtiysw nnrltlvgen pdstiitfdd hfdkinlgrn stfhtytlkv dandvslknl
      121 tiqntsgpvg qavalhiegd rvqvincqih gnqdtlygag egfrqyfknc eidgttdfif
      181 geatmvfenc aieskansyi taasttqtsk fgfvfigcdl tksdesinkv ylgrpwrsya
      241 ktvfincemd shitpvgwnn wgsaekektv fyaeyqsagp gandqnrttw shilskkeaa
      301 kyqlnnifgn wqp
//
LOCUS       WP_258099829             420 aa            linear   BCT 02-MAR-2025
DEFINITION  IPT/TIG domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258099829
VERSION     WP_258099829.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 420)
  AUTHORS   Bork,P., Doerks,T., Springer,T.A. and Snel,B.
  TITLE     Domains in plexins: links to integrins and transcription factors
  JOURNAL   Trends Biochem Sci 24 (7), 261-263 (1999)
   PUBMED   10390613
REFERENCE   2  (residues 1 to 420)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Gleaning non-trivial structural, functional and evolutionary
            information about proteins by iterative database searches
  JOURNAL   J Mol Biol 287 (5), 1023-1040 (1999)
   PUBMED   10222208
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01833.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..420
                     /product="IPT/TIG domain-containing protein"
                     /calculated_mol_wt=43138
     Region          38..114
                     /region_name="IPT"
                     /note="Immunoglobulin-like fold, Plexins, Transcription
                     factors (IPT). IPTs are also known as Transcription factor
                     ImmunoGlobin (TIG) domains. They are present in
                     intracellular transcription factors, cell surface
                     receptors (such as plexins and scatter factor...; cl15674"
                     /db_xref="CDD:472823"
     Region          121..>174
                     /region_name="IPT"
                     /note="Immunoglobulin-like fold, Plexins, Transcription
                     factors (IPT). IPTs are also known as Transcription factor
                     ImmunoGlobin (TIG) domains. They are present in
                     intracellular transcription factors, cell surface
                     receptors (such as plexins and scatter factor...; cl15674"
                     /db_xref="CDD:472823"
ORIGIN      
        1 mqtsrllkta smicllafvs vnliscgede ggndpripvv lsfspdsgep gdnvtitgtd
       61 lddatgvtig ggnavivsns stevvatvpe gastgkinvs taggvgqsag dftvivigaa
      121 tvasvspisg qvgdnitvtg tdmatvssvk vgdieatvvg ttdetvefti pegaeigass
      181 ltitntggtt ttstdavefy vfktnadlmm tfdgeqtgif tgspdpeest iygtsddatv
      241 qseaaalpea idgnffqfeg ysstdisgny ativqntsal pagtyaefla gasendiyfn
      301 iqinvgdlpa dydgalfglr frfdgddyef tptpteltel gfaaddngww nlsipatlfd
      361 ddaalgtfaf tdlqrvgvav rrnygsggta gqqvteadgg vfysqsvdnv ivtvggpysy
//
LOCUS       WP_258099913             347 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Marinoscillum pacificum].
ACCESSION   WP_258099913
VERSION     WP_258099913.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 347)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..347
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=39628
     Region          2..>125
                     /region_name="OmpR"
                     /note="DNA-binding response regulator, OmpR family,
                     contains REC and winged-helix (wHTH) domain [Signal
                     transduction mechanisms, Transcription]; COG0745"
                     /db_xref="CDD:440508"
     Region          141..342
                     /region_name="Crp"
                     /note="cAMP-binding domain of CRP or a regulatory subunit
                     of cAMP-dependent protein kinases [Signal transduction
                     mechanisms]; COG0664"
                     /db_xref="CDD:440428"
ORIGIN      
        1 mkkkvliied qpevreniae llelsnynpi taengkigvk kalqeqpdii lcdimmpemd
       61 gyevlylisk rpeiastpfi fltaksekad frkgmnmgad dyitkpfeem ellgaierrl
      121 nkyeklstkd elsefvkqak syaeledlen tsktrnfkkk dilyrqgdfa syaykiktgk
      181 vkiyqinqdg kefiidilte gqflgenali qdtdrtefaq aledtevimi prkefqdlif
      241 qnrevsgkfi kmlsknllek esslmemayd tvrkrtadal mklygtyses tgatkfevsr
      301 adlasmvgta tesvirmlse fkkdgyikie gstihvldae klgsirf
//
LOCUS       WP_258099920             209 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Marinoscillum pacificum].
ACCESSION   WP_258099920
VERSION     WP_258099920.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 209)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..209
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=23175
     Region          1..209
                     /region_name="PRK15369"
                     /note="two component system response regulator"
                     /db_xref="CDD:185267"
ORIGIN      
        1 mskirvlvvd dhqlfregir sifssnsdie vigeadsves mlsffestlp evvlidvtmp
       61 ggdgisaikq ckkkfptirf vvltmhadgq yvvkaarsga fgyllknadk eeltkavkea
      121 sfgrkyfnse isqlmvgnms legddpqqls erelqvlqlv sdgkttkeia delfvssrtv
      181 ethrvnmmkk lnvqntaeli kkavklnli
//
LOCUS       WP_258099921             570 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Marinoscillum pacificum].
ACCESSION   WP_258099921
VERSION     WP_258099921.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 570)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 570)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 570)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 570)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..570
                     /product="ATP-binding protein"
                     /calculated_mol_wt=64544
     Region          148..234
                     /region_name="PDC2_HK_sensor"
                     /note="second PDC (PhoQ/DcuS/CitA) domain of
                     methyl-accepting chemotaxis proteins, diguanylate-cyclase
                     and similar domains; cd18774"
                     /db_xref="CDD:350342"
     Region          344..568
                     /region_name="ComP"
                     /note="Signal transduction histidine kinase ComP [Signal
                     transduction mechanisms]; COG4585"
                     /db_xref="CDD:443642"
ORIGIN      
        1 mrfidikirn klalvmmifa maivfaittl yyyqfqaalk ervflqlssv kqlkvsqirq
       61 rlqgieesfi erndlklreq ygevlfhghi skdtiihgfp irfkdsesva iedisthdpy
      121 grltislqir esegcdvaiv rpnlqsilie rtglgetges ylvgsdkrmr tssrffpnqn
      181 pqeilvntrs vrdalegetg kniiddyrgv kvfsvyellv dselswviis eideqealfp
      241 lsslrqnliv vliiilvaif avsyelstql vspvlkakqh lasmakgvfn pvnknnignd
      301 elgqmfqaln glvkamdqtv gfadrigqgd fdaeyqllsn edklgaslie mkdrlrayqv
      361 neeklkranq kslisgeeke rsrlskelhd glgplltllr lkiesstidt nskhellnml
      421 dgtinemrri snnlmpsvlm dfgageairn vikqlkneei kvtyqydrne sleipsqiei
      481 tlfriaqeai nnvlkhsgaa dlkvsltefd drislfikdn gtgfdpeevh ngngirnmre
      541 rvniergife lttskqgtti eveipineqd
//
LOCUS       WP_258099946             509 aa            linear   BCT 02-MAR-2025
DEFINITION  NFACT RNA binding domain-containing protein [Marinoscillum
            pacificum].
ACCESSION   WP_258099946
VERSION     WP_258099946.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 509)
  AUTHORS   Burroughs,A.M. and Aravind,L.
  TITLE     A highly conserved family of domains related to the DNA-glycosylase
            fold helps predict multiple novel pathways for RNA modifications
  JOURNAL   RNA Biol 11 (4), 360-372 (2014)
   PUBMED   24646681
REFERENCE   2  (residues 1 to 509)
  AUTHORS   Courtney,H.S., Li,Y., Dale,J.B. and Hasty,D.L.
  TITLE     Cloning, sequencing, and expression of a
            fibronectin/fibrinogen-binding protein from group A streptococci
  JOURNAL   Infect Immun 62 (9), 3937-3946 (1994)
   PUBMED   8063411
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017482.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05670.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..509
                     /product="NFACT RNA binding domain-containing protein"
                     /calculated_mol_wt=58194
     Region          1..332
                     /region_name="NFACT_N"
                     /note="NFACT N-terminal and middle domains; pfam05833"
                     /db_xref="CDD:428644"
     Region          <226..509
                     /region_name="RqcH"
                     /note="Ribosome quality control (RQC) protein RqcH,
                     Rqc2/NEMF/Tae2 family, contains fibronectin-(FbpA) and
                     RNA- (NFACT) binding domains [Translation, ribosomal
                     structure and biogenesis, Posttranslational modification,
                     protein turnover, chaperones]; COG1293"
                     /db_xref="CDD:440904"
ORIGIN      
        1 mkrlakeldq eltdlellec fsqskdelil gfasanktiy iranlepqig llqimndfkr
       61 akrnsadlfs dligikvisv nvfqyersfw idfengmsli fkmhgsrsni llsendevks
      121 lfrsvlendl eikpselykh ldlsldrfns legnpnkyip algkevknyl trkgyfdadl
      181 nerwqqlqal lalletnhic vlnepkpnis llettcdqpl asaisatnel yirftknhyl
      241 tsakssvikp ledqikkten yisnteeklf kildrrgyde ianilmanlh liqkgqetvt
      301 lddfysneki diklnpelsp qknaenlyrk aknqnleian leaniesrkv kleelkkkla
      361 evaesediks lrkesssqqs skkeenlpyh pylingyqvf vgknarhnde ltlkvanknd
      421 lwlhakdvag shvvirdqag kkipkdviea aaqlaawysk rktdslcpvi ytpkkyirkr
      481 kgdppgavvv ekenvmmvvp knfdnsisi
//
LOCUS       WP_258100041             261 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3667 domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258100041
VERSION     WP_258100041.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12412.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..261
                     /product="DUF3667 domain-containing protein"
                     /calculated_mol_wt=30961
     Region          20..39
                     /region_name="zinc_ribbon_2"
                     /note="zinc-ribbon domain; pfam13240"
                     /db_xref="CDD:433054"
     Region          64..108
                     /region_name="DUF3667"
                     /note="Protein of unknown function (DUF3667); pfam12412"
                     /db_xref="CDD:432535"
ORIGIN      
        1 mqplifvsnl ivvndssaki ckncgfhlet thhfcpncgq ehkerviyfk effidflgdy
       61 ftfdskiirs vkpllfnpgf ltseyldgrr vryipplrmy ifisiffflm lssskepiql
      121 dgenldaaff dayfdiwmpr lfffllplfa fftyflfrqk gryylssfif svhfhafvll
      181 lftvyifits yfsqamygvn qwmllacgli veiyllmalk rvfdkkwfst wlrliflnvl
      241 yivsvavifl aiavliyktq y
//
LOCUS       WP_258100025             119 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6249 domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258100025
VERSION     WP_258100025.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039701.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19762.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..119
                     /product="DUF6249 domain-containing protein"
                     /calculated_mol_wt=13251
     Region          3..111
                     /region_name="DUF6249"
                     /note="Domain of unknown function (DUF6249); pfam19762"
                     /db_xref="CDD:466175"
ORIGIN      
        1 mevmivflvf famvfgiayv ffttrnkerl lmiekgadas lferkstpfs iakfilnial
       61 lfmgiglgif lgwtigdalg arhnqhievy vmssvfifgg lglvtgffit rkieradtk
//
LOCUS       WP_258100097            1130 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4175 family protein [Marinoscillum pacificum].
ACCESSION   WP_258100097
VERSION     WP_258100097.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025152.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13779.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1130
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..1130
                     /product="DUF4175 family protein"
                     /calculated_mol_wt=130326
     Region          <10..76
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          20..42
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320170"
     Region          47..76
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320170"
     Region          501..>1104
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
ORIGIN      
        1 mttnnlkdni irfkrkfhvn qlirgslisi llfgaiwlif sllegyfwfd qpvrlgifai
       61 lvglllyfvi frilipiski vqinrgisdq eaakligrhf pdiqdkllnl lqlsqnstsq
      121 sslllaaidq kqselkvfdf keavdfkvnk kyliyvgsll vviflvsfis pglfsesssr
      181 ivqfnkpfek papfsfeles klfafkgdsy eidvmlnges ipdqvylldn nqkfrlnkgk
      241 nghyvfnyps insnksiqfs aagydskkye ikvinrpelr nmsvkidype ytglsdemre
      301 ntgsfvvaeg tkitwninss dtqqgffivg gdsssmslkn dhfefarsvt nsleyeiala
      361 neyatnksri iydisvikde lpeidanylp dtisyksllf tgnieddygf tslsllykkn
      421 ddknyhriai pfeksqinqq fylqwdldsm nltsedylea fvqvtdndri ngykasqsqk
      481 fflrmpsdke vesmiseksn esesklddae akaeeindrl kdledrlrnk reldwqdkkl
      541 iediikdkek lskeieelae qhqqlldsqk efgkqseklq ekakqlqeli eevlddetkk
      601 lydelqkllk eqnntdqvle elskiknnek nmekeleral elfkrlklqt gieqsaekle
      661 klaekqedla nvtmaealld eerqssksae nkesqqqnde qkaaqtdtek qqeeinkefd
      721 eiqeqldsle qlnqdlknpq pmedfqkeeq qieeklneip qdlqnqqkqk agqkmknagq
      781 qmknmassmq qmqmgmemtm mqenldhlrd ildnliklsf eqeniideik evqqidprfi
      841 elsqdqlqli snaqviedsl lslasrvaqi snfvtrevge insqldramn elrernkgka
      901 ashqqfamts mnnlallldd vmqqmqmams eamgnpqkgq gqkqslpsmq qmqqqlsdqi
      961 qqlkssgksg relseqlakl aaeqaelrrq mesmqqqlag qkagkegeng eeggngseag
     1021 dklgeaikqm eenevdlvnk rltqelidrq qeiltrmlea eesmreqkes peregetatp
     1081 qqrklppaie eylkakkeei ellktipldl npfykkevnd yfrrlsgeeq
//
LOCUS       WP_258100092             568 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258100092
VERSION     WP_258100092.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024603.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13205.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..568
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=64443
     Region          33..132
                     /region_name="Big_5"
                     /note="Bacterial Ig-like domain; pfam13205"
                     /db_xref="CDD:463809"
     Region          <476..>534
                     /region_name="DUF2141"
                     /note="Uncharacterized protein conserved in bacteria
                     (DUF2141); cl01930"
                     /db_xref="CDD:470398"
ORIGIN      
        1 mkllfksiti ilvfelials canpitptgg pkdtipptll esnpvdqqln fkgqtitlef
       61 devinadklq qnlvitptte tkyktiqkky svtlqfeepf edsttytfnf fdgitditek
      121 tpaenliiaf stgsyidsly lsgqvldllt gepkdkitvg lytisdtldf evnkptyfst
      181 tneegqfflq nikaskfrml afgdenrnli fdaatesyai ksdtidmrtq sgdtlslnai
      241 qinaaaleyi sarpsgryfe iryskplvey siqntdslni asklvdenkt irvydnksft
      301 dslfsilyvr dslgntstdt tyiqfressr kpeaftmsll paknsqvtst sryklsfnkp
      361 teilntdfld vvydtlvrld yqprnvvysn hnldisfdld itlnnykdsl trlsdaivid
      421 stnidtaqme lkkrltsinq snfsvqilpk sfqsveldss avlnqnykfl kqeslgliev
      481 tlntdsthfi vqlmnkkevv asqtntkhcv fnnlppanyw vrilidsnqn gkwdvgnyre
      541 niapepviyf keettlranf enqlefsf
//
LOCUS       WP_258100126             153 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6702 family protein [Marinoscillum pacificum].
ACCESSION   WP_258100126
VERSION     WP_258100126.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042765.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20420.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..153
                     /product="DUF6702 family protein"
                     /calculated_mol_wt=17707
     Region          10..143
                     /region_name="DUF6702"
                     /note="Domain of unknown function (DUF6702); pfam20420"
                     /db_xref="CDD:466569"
ORIGIN      
        1 mllflllllh pyhvsvteir ydeevksiqi teriflddle eglraannde kfvimedslq
       61 theylaayfq enfnvginga kssftylgge veddviwcyi evtnvdqles iqltnkvlte
      121 vyddqknlvh fkiggekksf ilsqkefkae yqk
//
LOCUS       WP_258100158             814 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha-L-arabinofuranosidase C-terminal domain-containing protein
            [Marinoscillum pacificum].
ACCESSION   WP_258100158
VERSION     WP_258100158.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 814)
  AUTHORS   Gilead,S. and Shoham,Y.
  TITLE     Purification and characterization of alpha-L-arabinofuranosidase
            from Bacillus stearothermophilus T-6
  JOURNAL   Appl Environ Microbiol 61 (1), 170-174 (1995)
   PUBMED   7887599
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018647.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06964.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..814
                     /product="alpha-L-arabinofuranosidase C-terminal
                     domain-containing protein"
                     /GO_function="GO:0046556 - alpha-L-arabinofuranosidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0046373 - L-arabinose metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=91071
     Region          61..205
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; cl19911"
                     /db_xref="CDD:418717"
     Region          224..557
                     /region_name="AbfA"
                     /note="Alpha-L-arabinofuranosidase [Carbohydrate transport
                     and metabolism]; COG3534"
                     /db_xref="CDD:442755"
     Region          457..>574
                     /region_name="Alpha-L-AF_C"
                     /note="Alpha-L-arabinofuranosidase C-terminal domain;
                     cl01412"
                     /db_xref="CDD:470194"
ORIGIN      
        1 mksirtalfa ltgglffaac eqpaqvtvkv npndpgtsis phligaffed inyaadggly
       61 aelvqnrsfe yyeeegyttt kplfaweqig asgnlsvekt kplnannsny lhfdvkdaqg
      121 gsfknagfdg isvksdesys fsmfvrtsss tsqgievslv nakgnsiael eleaptsewt
      181 kvegvlkpse tdenselviq ingsgdyyfd mislfpektf ngranglrmd laqsiadlsp
      241 qfvrfpggci shgasldnay rwketvgave ertpnfnawg yhqtyglgff eyfqfcedig
      301 aiplpvvpvg iscqfrnrqi apiedmqlwv ddaldlvefa ngsvdtewgk lraemghpes
      361 fnmeyiclgn eedfipefev rmkmitdslr kyypeikvig tsgvaasgyh ydelwdysek
      421 ekldavdehy yvspiwmlnn lnryddfdrn gpkvfigeya srddrlqnai aeaayltgve
      481 knadviqftc yaplltnvnh qqwhpdmirf dnnnvvktps yyvqqlysqy tgdeyipsei
      541 tysktyqpna ktyfgkvgvg twhtqakydd ikvvsgdkvl mdqtfdents ewtsskgtfv
      601 leegsyaqts deepamsifn lpinetrytl tlkamktggr egflipfayq gsdkfywlni
      661 ggwnnsrhav evanggakae liskggsies nkwytikvev gekvkcyldd ellfeipeqa
      721 ppiaasvvkd ldenelivkl vnssdeaita dvmiegldeq lsadvitltg astrlrnkle
      781 epenvkpvss tiqvkdlkny slpansfqvi sikr
//
LOCUS       WP_258100170             469 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein [Marinoscillum pacificum].
ACCESSION   WP_258100170
VERSION     WP_258100170.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 469)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..469
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=52283
     Region          15..438
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     Site            order(119..123,131,146,148..149,194..197,200,203..204,
                     218..220,252,343,345,371,411)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143395"
     Site            order(123,218,249,252)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143395"
ORIGIN      
        1 meapqvstkn efsslfqshq ktammlkkgt iterkgklig lkdwlldhqh elhqseyldl
       61 kkpedevnvt elypliaear haishldewt tpqpirssmt ffgtrafvhy epkgtaliis
      121 pwnyplllal gpmisaiaag ntvilkpsef tpatnkvilk mahdlfdhne iqviegeaev
      181 sasllelpfd hifftgspqv gkivmtaaak hltsvtlelg gksptiidet anirdaaakl
      241 swakwtnagq tcvapdylfi heskkedfin aykdatlkmy gdkksytsii nvkhyhriee
      301 tlqdalnkga nviisgnnsp eeldiqpvvi dnvtddmrvm keeifgpvfp imtyqnldev
      361 idyinarpkp lalylysknr knkrkvlqet ssgalvynds vlhfghphlp aggvnnsgig
      421 kahghagfla fsheksvlsq qigltvastv rppysklkkk liqfmlkyl
//
LOCUS       WP_258100189             251 aa            linear   BCT 02-MAR-2025
DEFINITION  site-2 protease family protein [Marinoscillum pacificum].
ACCESSION   WP_258100189
VERSION     WP_258100189.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014244.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02163.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..251
                     /product="site-2 protease family protein"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=29147
     Region          <124..251
                     /region_name="RseP"
                     /note="Membrane-associated protease RseP, regulator of
                     RpoE activity [Posttranslational modification, protein
                     turnover, chaperones, Transcription]; COG0750"
                     /db_xref="CDD:440513"
ORIGIN      
        1 mnptfstiva ylfiylvyll gklvlclryg iydrhiflgm gekpaftfsl slvtisvglf
       61 iplpyfarfy syqpdgsker mkmaweyadr pilhrllinf ggafsmmima ififlfigfv
      121 qeesvlrair ygflepfrli winikalyil ifggiadadt lsgpvrmaql fgewsylrfl
      181 ritgvilggf vfyeflpfpk tamtrtipli teaffnkpfs yklynridqi fwgliivlft
      241 wtiikdisql m
//
LOCUS       WP_258100215             109 aa            linear   BCT 02-MAR-2025
DEFINITION  YciI family protein [Marinoscillum pacificum].
ACCESSION   WP_258100215
VERSION     WP_258100215.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 109)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015735.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03795.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..109
                     /product="YciI family protein"
                     /calculated_mol_wt=11926
     Region          3..105
                     /region_name="YCII"
                     /note="5-chloro-2-hydroxyhydroquinone dehydrochlorinase
                     TtfG, YCII superfamily [Secondary metabolites
                     biosynthesis, transport and catabolism]; COG3795"
                     /db_xref="CDD:443009"
ORIGIN      
        1 mnkylviyha pkaevkgmnf pseeekmaam mpwfawkeam gdhlldfgnp lmggkkltpk
       61 gtpvesqkev sgysliqans ydhaiellng hphlasgace ievheaiam
//
LOCUS       WP_258100269             239 aa            linear   BCT 02-MAR-2025
DEFINITION  type III pantothenate kinase [Marinoscillum pacificum].
ACCESSION   WP_258100269
VERSION     WP_258100269.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 239)
  AUTHORS   Yang,K., Eyobo,Y., Brand,L.A., Martynowski,D., Tomchick,D.,
            Strauss,E. and Zhang,H.
  TITLE     Crystal structure of a type III pantothenate kinase: insight into
            the mechanism of an essential coenzyme A biosynthetic enzyme
            universally distributed in bacteria
  JOURNAL   J Bacteriol 188 (15), 5532-5540 (2006)
   PUBMED   16855243
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015280.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03309.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..239
                     /product="type III pantothenate kinase"
                     /EC_number="2.7.1.33"
                     /GO_function="GO:0004594 - pantothenate kinase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=26599
     Region          1..239
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mpnvavdign triksalfeg ehlistaihe nlealhsfya ksahhwifgs vkhydeqikk
       61 ifydekyhll nnrtplpiev nydtpetlgv drlasavgaf tsfpdknili idagtcityd
      121 vidkngvfqg gviapglkmr mkamshytda lpdissefse imlknlgkst recllagsls
      181 atihevngfi dhflkeyedl vvmmtggdti hfesklkahi fadfdlvltg lnriliknq
//
LOCUS       WP_258100335             257 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-dependent peptidase [Marinoscillum pacificum].
ACCESSION   WP_258100335
VERSION     WP_258100335.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 257)
  AUTHORS   Gohler,A.K., Staab,A., Gabor,E., Homann,K., Klang,E., Kosfeld,A.,
            Muus,J.E., Wulftange,J.S. and Jahreis,K.
  TITLE     Characterization of MtfA, a novel regulatory output signal protein
            of the glucose-phosphotransferase system in Escherichia coli K-12
  JOURNAL   J Bacteriol 194 (5), 1024-1035 (2012)
   PUBMED   22178967
REFERENCE   2  (residues 1 to 257)
  AUTHORS   Deutscher,J.
  TITLE     The mechanisms of carbon catabolite repression in bacteria
  JOURNAL   Curr Opin Microbiol 11 (2), 87-93 (2008)
   PUBMED   18359269
REFERENCE   3  (residues 1 to 257)
  AUTHORS   Becker,A.K., Zeppenfeld,T., Staab,A., Seitz,S., Boos,W., Morita,T.,
            Aiba,H., Mahr,K., Titgemeyer,F. and Jahreis,K.
  TITLE     YeeI, a novel protein involved in modulation of the activity of the
            glucose-phosphotransferase system in Escherichia coli K-12
  JOURNAL   J Bacteriol 188 (15), 5439-5449 (2006)
   PUBMED   16855233
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017932.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06167.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..257
                     /product="zinc-dependent peptidase"
                     /calculated_mol_wt=29680
     Region          43..246
                     /region_name="Peptidase_M90-like"
                     /note="uncharacterized M90 peptidase family-like proteins;
                     cd20170"
                     /db_xref="CDD:380913"
ORIGIN      
        1 mlwflliavi ifgvvvyrsh lfqqflaaeg ikpslnkeel yslqkhfayy ralppksqri
       61 fayrvnrfkk ltefvprhmg evtsemevli sasavqiafg fadvflahfd riivypdqff
      121 stadqryhkg evnpamaviv iswrhfvegy ateeglnlgl hemahalqle nvimndefgf
      181 mdedaiklwq glasqemrli regkstffrs yagtnhaeff avavenffer pkefsehhsa
      241 lyktladllq qdplllr
//
LOCUS       WP_258100339             384 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Marinoscillum pacificum].
ACCESSION   WP_258100339
VERSION     WP_258100339.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 384)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 384)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 384)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..384
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=41818
     Region          12..384
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(98,128,130,161,163,366..368,370,372)
                     /site_type="active"
                     /db_xref="CDD:173847"
ORIGIN      
        1 mtespqtsqr eenqrmiadm irefakheie phkmewdesq efpihvfkkl gelglmgvlv
       61 pqeyggsgfg yheyvtaiie lgrvdgsigl smaahnslct ghilqhases qkakylpkla
      121 tgewigawgl tepntgsdag nmrttavkeg newvlngakn fithgisgdv avviartgep
      181 gksrnasafi vergtpgfsg grkenklgmr csetaemifd ncripqenli gevgdgfvqs
      241 lkvldggris iaalgcgiaq gafdvsvqys kereqfgkpi ssfqaisfkl admatkleaa
      301 klltyqsael kmqgkpmtke samakyysse vavelgneav qifggygytk dypaekyyrd
      361 aklctigegt seiqklvisr evlk
//
LOCUS       WP_258100367             217 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Marinoscillum
            pacificum].
ACCESSION   WP_258100367
VERSION     WP_258100367.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 217)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 217)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..217
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=23572
     Region          4..208
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(9,11..12,14,34,35,86..88,136..138,151,155,181..184)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(110,138,151,155)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mekviaivgm gggisyaval rfgragykig miarneeklk vfkemlfkdg ipseyytadv
       61 svqsqltnaf rdlksdmgdp evlhynaaki knkhilkesi asiaadikvn vggalhsvkq
      121 vvrpmkkank gtilitgggl sqdphpnygs lsigkaavln laqqlgkela dtnikvgtvv
      181 vngyvqakdl kynptmiade fwkihtdpyk dfslvey
//
LOCUS       WP_258100370             253 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Marinoscillum pacificum].
ACCESSION   WP_258100370
VERSION     WP_258100370.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 253)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..253
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=28594
     Region          1..253
                     /region_name="PRK10673"
                     /note="esterase"
                     /db_xref="CDD:182637"
ORIGIN      
        1 mklnfrkygs ghplfvlhgv fgssdnwqtl gkgfsehftt ylidlrnhgn sphsdemnyq
       61 vmtddllelm edeglesiyl vghsmggkta mhfatmnpdk vdklivvdia pkyypphhqq
      121 ifegfhsinl atlqsrkead dqmakvitef gvrqfilknl grdsdnnfew klnlaaiean
      181 idqvgsgiad navyekptlf iggkksnyik eedyslissh fpeakiemid daghwvhaek
      241 pkelfelvid fls
//
LOCUS       WP_258100415             833 aa            linear   BCT 02-MAR-2025
DEFINITION  SLBB domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258100415
VERSION     WP_258100415.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 833)
  AUTHORS   Burroughs,A.M., Balaji,S., Iyer,L.M. and Aravind,L.
  TITLE     A novel superfamily containing the beta-grasp fold involved in
            binding diverse soluble ligands
  JOURNAL   Biol Direct 2, 4 (2007)
   PUBMED   17250770
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022007.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10531.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..833
                     /product="SLBB domain-containing protein"
                     /calculated_mol_wt=92497
     Region          159..328
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          327..377
                     /region_name="SLBB"
                     /note="SLBB domain; pfam10531"
                     /db_xref="CDD:463136"
     Region          410..>445
                     /region_name="SLBB"
                     /note="SLBB domain; pfam10531"
                     /db_xref="CDD:463136"
     Region          <500..590
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          <598..729
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
ORIGIN      
        1 mhknlvvvlf aiilfgysdf vsaqnansiq nlenvnvdel sddqiqriid qaesggyteq
       61 qlefmarsrg mssaqisklr qrinevrngs sskssnissv drsrvspnqe evdanrssgf
      121 dpfqtifped tlvdpselki fgldffnnpe isfdpslnia tpadyqigpg dqividvwga
      181 seqnyqlqvs pegsiiipnl gpiylnglsv ekaetriksr lkniystlgq ntfaqvslgq
      241 irtvsvnvlg evaqpgtyqv ssfttafnal ynaggpteng sfrsigiyrs gkevavlday
      301 nflisgtgqn imlqdqdvvm vkpyenrvav rgevkrpayy evikgeslnd vvsfaggftg
      361 waykksisir rnldnrktvv tvlanrfpet glidgddlev gkiqnqfvnr vrvegavnhp
      421 gefelsdgmt lkdlinyvdg lradaflqrg iiirqnddlt lsnisfspre ivsgesdlml
      481 ksedlikiqs ifdlreeymv siqgevltpg dypfadgmtv enliylangf ketaaksfve
      541 varrvtdedg dgsatatiyn fpidknlsik dgdkdfqlkp fdlvvirksp fyekqnivev
      601 egeaqypgky alaskneris dvltraggtt kyayikgatl irrteyfvnk gkgesdsnes
      661 tdaaakirqe dlksllerdt lvdqrdqvfk tqesigikld eilkapgsky dlilkegdvl
      721 siprqlqtvr irgevlypst vrfdnnrtfr qyisqsggfs ddakkgksyv vypngsaert
      781 ksflwfknyp rvdpgaevii prkpekrkls pqevigiasg lgtlaliinn ltr
//
LOCUS       WP_258100481            3325 aa            linear   BCT 02-MAR-2025
DEFINITION  PKD domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258100481
VERSION     WP_258100481.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040138.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18911.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3325
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..3325
                     /product="PKD domain-containing protein"
                     /calculated_mol_wt=362380
     Region          <416..695
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
     Region          416..502
                     /region_name="PKD_4"
                     /note="PKD domain; pfam18911"
                     /db_xref="CDD:436824"
     Region          <544..587
                     /region_name="PKD_4"
                     /note="PKD domain; pfam18911"
                     /db_xref="CDD:436824"
     Region          785..864
                     /region_name="PKD_4"
                     /note="PKD domain; pfam18911"
                     /db_xref="CDD:436824"
     Region          <1080..>1831
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          <1548..>2211
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          1684..1757
                     /region_name="PKD_4"
                     /note="PKD domain; pfam18911"
                     /db_xref="CDD:436824"
     Region          2166..2414
                     /region_name="COG3291"
                     /note="Uncharacterized conserved protein, PKD repeat
                     domain [Function unknown]"
                     /db_xref="CDD:442520"
     Region          <2497..>3229
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          3249..3322
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     pfam18962"
                     /db_xref="CDD:436869"
ORIGIN      
        1 mrlvsvvisl vlltmaqmlf gqtnlynket qltisekaql yisgdyqdds dgtqryllln
       61 gklvlggdfi nnsenkllna dqkndpndyg slimtggnvs idgdhgslyv psltlsgsvn
      121 ltlgddlevq syidlaggsi llneknieye eyqvsatvge aiinesvnht fsgtgvltfp
      181 syydstgvne vnfrgtglgf ildgssslpe lkikrvyddq dkfsvtdgsf hskryytihv
      241 pldegqnidl itipelrfny yqdevenidt plaiyvrdtt dveawvrlet fgtisdslir
      301 vedfsfvpdq elelvlakkd cdevpdaipt tsqsdvldgd tisicdasel ilssdehfvr
      361 wiyqgdttya ssltidntdl sdetnngdle tiklfersin gcqqevtyil dlieyptasf
      421 eyptsvcdld tvvfdgsass lngeagtliy dwnfddelss sntssdevts hvfsdtsyay
      481 nvtlivtnqh ncsdedsydv lvnelpfvsf dlkdtvcqgs aleiinnsyg tdvqaggqts
      541 tsqltyswef esggtssirt ptytyntegv ksvylqvtda rncvndttel idikplptas
      601 femlidggtf detgvgvceg veitmnnesf eprngpltyl wefgdgedtt laspdhsftp
      661 distsynitl ttttefgcvd dsirsvlihp apegdqlfmy dpggypvwda cideqiqfqs
      721 nsfiqsgsid svswnfgdye ysddvtanhs fassgnyniv qelwsdhgcr neiltdsift
      781 ihenplasfq fdatcdgdav nfygyedpnr dylfdwifrs getselqnps hefptdnqys
      841 ydvlltvtds iagctddttr tvtisratni dlpsyaismt gsyeldpvvt gsypnlstgs
      901 fywiykndtv stssnllaee sdnynfhiyt vdgcydaqti nvfivaphdf pseksdcdnv
      961 elnatvnhyp ttegtltykw yydgapfane arieaiesge yvsevvfryn gadyihrdti
     1021 qvsvdsppil dlggdksice geiailqsnv yggnttwtwy nskqevvgtd svyhasladt
     1081 yrldikkdsc esstivkvsi ypapesgftv sksqvcedee itfqsqvnas qgdhivdylw
     1141 dfgdgtsssl qnpdksftnh giytvtltvt sssgcsdsys sdvtvypnpi vdfdfassce
     1201 dqsiglvnnt viagggtlky twdfgdstgs tlfnpdktys qpgtyvitls vegpnecils
     1261 esqsitihpk ptgsfhfene dndiitgace neliyfinnt idpnsgvldy swdfgdgqss
     1321 ilpnptysya nsgsypvilt vtteegceyt lentihvrpv pevafdfspv cdgnvisfin
     1381 nttldagafi ksyywdfgdg ntskeqspdh tyntygsyni tltvettkgc aasltksvei
     1441 yrkpefdlde yvlsvsgsyl idpaadplsy ipagsifrwf dkdgevstnp tlevseygvy
     1501 hltiespegc dssgsitvyn lipnelggdl tvcgeyllda tvldappgsd isyswfkdga
     1561 sldvtepell vtesanyrvd vvltvltetg hpsksysddi tinvqepsdp idlggtidlc
     1621 rgstvmltsn vdadsyvwkn lttnttlgsa stqlvsesgl yqletssgtc nstgtvevvd
     1681 astpiagfta dnevcinstv afqnisfsdd ldnaiiayaw dfgdgttsti enpdksyass
     1741 gnfsvlltvt gengctdtft ksisvddips pafsasdvcl gevvsfvdas inasnedytw
     1801 dfgdghysse knpshlyeaa giysvsltln naceatytdn isvlssdpif nsedvftcgs
     1861 smlldagven snyrwydvgs nttlattqsy tentdrllgl sytsvsgcpv veevtvhlns
     1921 tvqadlgldr tvcesvilnp gafpgatflw stgassptie iinsgtysvd itdqngctts
     1981 davvitveta ptlefgpdqs lcfgeelild agnsgatylw sngatsqtis vnqsgeyavl
     2041 velgscsvsd tvyvtiegel sndfevdgvc sgaatnfnyt gsesnleylw dfgdgttsvq
     2101 aspqkiftss giqyvsltit dangcsatit kpvditpgii pdftfsnace gaemeflqas
     2161 syagldnlsf qwyfgdgqsa sgssvghvfn svdtyvvrle vtndfgcsas iskavniles
     2221 pevsiadvet cesstildae nigstylwsd nsiqqtlevt tsgsyavmvt dvngcfatdt
     2281 aevvifeydq pdlgadieac gtlelnpsav aasyewstgq tsstidiqts gtywvktrsa
     2341 dlcpasdtiv vtihelpefe lgdplefceg esvvlnpnss iaidsyswsd gsteeilevs
     2401 esgnysvvli stdgceytdd idvyvnelpe spleetyaac erielfanna gssyvwstge
     2461 tsssieitns gdywvqinsa dgcsiidsts vtitttpivd lgfdqvicag sqitldaena
     2521 gavykwstgd ttktiqiaet geyavevnyg gcslsdtitv tvldeldidf efteacsgaa
     2581 tvftytgven disyswnfgd gtssvnasps kifstsgsfe vlltitnqtg csvstsktmv
     2641 vspriqpnfa fgtacegnsi sftnasiyag tdslsylwyf gdgttsteye pahtyissgt
     2701 ylvrlevsne sscleyitkn vevrdapyld lgdylescse sivinagsyg eayrwsdnss
     2761 dqilevfesg tywvrvtgen gcvsidsvev eiyeydhadl gedlevcgef ildpnaqaas
     2821 fewstgddsp titinetgty wvqtvsddfc fsrdtidmiv nplpefdlge didlcegeev
     2881 tlipnsteea vaylwstget tsqvtisttg sytatlttae gcdytdeidv tinelpesvl
     2941 edyylgcasl rlevdspdna ilwstgeirp ylditttgty wieirtragc siidstfvei
     3001 vdfpnpdlgp dvelcygeev tldagvftsy kwngieggry ldvgvsgiye vevtneygcv
     3061 etdeieviir pslgldlpde hlvcegseft ldagvagedy syewkspdgk tgtdrffdse
     3121 ipglyyvtvs dpfgcsetda mnvvtttesi easflvpsvv algdrvkfiq ltepepvwfe
     3181 wdlgngvvtd ymfnmtyryq aigtytvslt vsngicehkv skdievvear tfeagedkie
     3241 fvgfeelkvy pnpasefinl eyeltteatv diqvydlsgf lvahhafdnk evalqmdist
     3301 yasgtyivim ragsdikkmr fikmk
//
LOCUS       WP_258099844             289 aa            linear   BCT 02-MAR-2025
DEFINITION  polysaccharide lyase [Marinoscillum pacificum].
ACCESSION   WP_258099844
VERSION     WP_258099844.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 289)
  AUTHORS   Dong,F., Xu,F., Chen,X.L., Li,P.Y., Li,C.Y., Li,F.C., Chen,Y.,
            Wang,P. and Zhang,Y.Z.
  TITLE     Alginate Lyase Aly36B is a New Bacterial Member of the
            Polysaccharide Lyase Family 36 and Catalyzes by a Novel Mechanism
            With Lysine as Both the Catalytic Base and Catalytic Acid
  JOURNAL   J Mol Biol 431 (24), 4897-4909 (2019)
   PUBMED   31682837
REFERENCE   2  (residues 1 to 289)
  AUTHORS   Qin,H.M., Miyakawa,T., Inoue,A., Nishiyama,R., Nakamura,A.,
            Asano,A., Sawano,Y., Ojima,T. and Tanokura,M.
  TITLE     Structure and Polymannuronate Specificity of a Eukaryotic Member of
            Polysaccharide Lyase Family 14
  JOURNAL   J Biol Chem 292 (6), 2182-2190 (2017)
   PUBMED   28011642
REFERENCE   3  (residues 1 to 289)
  AUTHORS   Ogura,K., Yamasaki,M., Yamada,T., Mikami,B., Hashimoto,W. and
            Murata,K.
  TITLE     Crystal structure of family 14 polysaccharide lyase with
            pH-dependent modes of action
  JOURNAL   J Biol Chem 284 (51), 35572-35579 (2009)
   PUBMED   19846561
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF045027.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21294.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..289
                     /product="polysaccharide lyase"
                     /calculated_mol_wt=31603
ORIGIN      
        1 msniyqqwkg wtlsiiagvg llfggcqedl vtpeiideda tearaiyssr evyftqsngq
       61 fsssnassaf gnisgwdags tyissntlri alaanvvgts ggmesridvs dgteywleyk
      121 vrfhsqfdws rggkvgwgfq vgdgvtgcra sdaqagnggs mramwyspns dpnrvyfqpy
      181 lyhqgmtsnc gesfgakyps sgalsrgtwy tigfymksnt gssyngtaem kvngstvlrr
      241 dnikwassds krkvkglyys vfrggsqsyw gsgsvgyiyf ddlkwvkms
//
LOCUS       WP_258100636             418 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Marinoscillum pacificum].
ACCESSION   WP_258100636
VERSION     WP_258100636.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 418)
  AUTHORS   Das,A.K., Cohen,P.W. and Barford,D.
  TITLE     The structure of the tetratricopeptide repeats of protein
            phosphatase 5: implications for TPR-mediated protein-protein
            interactions
  JOURNAL   EMBO J 17 (5), 1192-1199 (1998)
   PUBMED   9482716
REFERENCE   2  (residues 1 to 418)
  AUTHORS   Lamb,J.R., Tugendreich,S. and Hieter,P.
  TITLE     Tetratrico peptide repeat interactions: to TPR or not to TPR?
  JOURNAL   Trends Biochem Sci 20 (7), 257-259 (1995)
   PUBMED   7667876
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019339.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07719.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..418
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=48651
     Region          28..>327
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          146..180
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(147,150..151,154..155,157,187,190..191,194..195,
                     197..198,228,231..232,235..236,239)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          185..215
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          227..254
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          260..302
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          307..332
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mkyflialfs vllseviasd kdiivklhdk cyslldnnld saiilaeqae klalqennlf
       61 leakslyika faydakqdlg ksfvlnlkal ellnklkskq asdtrieiln ntglilkqhy
      121 vyseaikyyd egidlaieng nmellaplyy nkalalrhnn qlnealeiie lsllsaqkak
      181 desrvlrgln qkglilkdle efnrardtyt eiikypfekk spekylgqaw hniavtylne
      241 nnldkakkay qkailikeqr nkpedlfity qdysqtllnl selneaysya qkclvlyehc
      301 dldpdnykff nlmseiayrq nkpklvreys qkyfdenekf ltqqreilev kdrykmevlt
      361 agffselhad qnisllervl wtvgilftci llitriytyl rkrslsiqit qikeegtv
//
LOCUS       WP_258100665            1365 aa            linear   BCT 02-MAR-2025
DEFINITION  BspA family leucine-rich repeat surface protein [Marinoscillum
            pacificum].
ACCESSION   WP_258100665
VERSION     WP_258100665.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015347.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03382.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1365
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..1365
                     /product="BspA family leucine-rich repeat surface protein"
                     /calculated_mol_wt=148228
     Region          140..259
                     /region_name="DUF285"
                     /note="Mycoplasma protein of unknown function, DUF285;
                     pfam03382"
                     /db_xref="CDD:427272"
     Region          290..409
                     /region_name="DUF285"
                     /note="Mycoplasma protein of unknown function, DUF285;
                     pfam03382"
                     /db_xref="CDD:427272"
     Region          365..532
                     /region_name="DUF285"
                     /note="Mycoplasma protein of unknown function, DUF285;
                     pfam03382"
                     /db_xref="CDD:427272"
     Region          702..810
                     /region_name="DUF285"
                     /note="Mycoplasma protein of unknown function, DUF285;
                     pfam03382"
                     /db_xref="CDD:427272"
     Region          1304..1365
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mnktipllcl lflasfalfs qptgnpfitk wdtnggvrvv lpqnssysyn ftvdwgdgti
       61 esktssggvv hdyatsgvkt ikiygeypil nfpfsfsytw elvevvqwgd iqwasmnqmf
      121 rncsnlvvsa tdvpdltnvt dmsnmfqnag lgtvdftgwd vssvtnmsem figsssfngd
      181 lsdwdvsavt dmnrmfygas sfnsdlstwn pssvtdmsym fygassfasd lsgwttpalv
      241 amnnmfenat dfnsdltswd vsgitdmtsv fknassfngn lsgwdvsgvt nmnslfygas
      301 sfnsdisgwd vsavtdlqqi fynatnfngd isswnvgavt nlyaafrgas sfnqniggwd
      361 vsqvtnmylm fynatafnqd igswntgnvt nmssmfrgat afnqeigswd vssvsgfnnm
      421 fenasafaad lsswdvssga sfsvmfqnvp gfnadisgwn tssatnmgsm fagatsfnqd
      481 iggwdvsnvt iayfmfsgas sfdqdlsdwd vtsmtnmrni fdntslsssn ydlilnswsq
      541 lsglqsnvrf ggvgleyceg gdgraslidt ynwniegdte vcpdpfitkw hieddgtady
      601 nqvryyasgv ylgkfdidwg dgqvsedvvk eathtyaadg dylisvsgdy htfrvvdnkg
      661 mkqlieivqw gdtqwwdlng sfaqctnlem tatdipdlsi atslfrafyq csnfnsdlsd
      721 wdvsnitnmd wafaysgfng digswdvssv tsmgstfsnn tvfnqdvssw dvsnvtttsg
      781 lfegassfdq dlgdwdlssv ttlggifkna glstenydnt ligwaqntgl qsnlslgang
      841 ltycaggnar qmlidnfnws ildggescdv itwngsswsn gvgpsinddv vmasgtytag
      901 fecnnlsiss gasivlngsi evhgdltndg tfevssgssl itydgntiae nitfsrntry
      961 sdgkysfvgv pvenggstit gvqlgshvys ydesaseisd dlarwidass dalvpgrgyt
     1021 qaeqqiieft grpndgtvsy tasavndgfh llsnpypaai dvnefidgns ditgtlyvwd
     1081 dngsdtgrgs nsdyivvtkt gatdnngpdn esrwnghigs mqgffiqmdg sagsveftes
     1141 mrvsasnadg nffrssdeka sivrvnltna nglfkqaivg wndeasntef skgydgrvfs
     1201 tsspnliysi kgedalaiqt ithlkeqipl afnvseqgiy kieldfsesk geflylrdnl
     1261 tgeivdagag yefsaqsgqn ngrfvlvrsr nvlgltddnl hvyaanntly ftiqdgvkrn
     1321 fkvlnlsgqq vmtlslehsa qvqmsvpagv yfvtdgkqsf kvvlk
//
LOCUS       WP_258100175              94 aa            linear   BCT 02-MAR-2025
DEFINITION  Trm112 family protein [Marinoscillum pacificum].
ACCESSION   WP_258100175
VERSION     WP_258100175.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 94)
  AUTHORS   Heurgue-Hamard,V., Graille,M., Scrima,N., Ulryck,N., Champ,S., van
            Tilbeurgh,H. and Buckingham,R.H.
  TITLE     The zinc finger protein Ynr046w is plurifunctional and a component
            of the eRF1 methyltransferase in yeast
  JOURNAL   J Biol Chem 281 (47), 36140-36148 (2006)
   PUBMED   17008308
REFERENCE   2  (residues 1 to 94)
  AUTHORS   Purushothaman,S.K., Bujnicki,J.M., Grosjean,H. and Lapeyre,B.
  TITLE     Trm11p and Trm112p are both required for the formation of
            2-methylguanosine at position 10 in yeast tRNA
  JOURNAL   Mol Cell Biol 25 (11), 4359-4370 (2005)
   PUBMED   15899842
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015899.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03966.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..94
                     /product="Trm112 family protein"
                     /calculated_mol_wt=10822
     Region          1..59
                     /region_name="Trm112_arch"
                     /note="methytransferase partner Trm112; NF038101"
                     /db_xref="CDD:411682"
ORIGIN      
        1 mrkallekmc cpfdkgdlev tilteendei ieglmtcpsc qryypiiysi pimtpdeyrq
       61 ksleapvlek wglsidphnp drfmlenakt llee
//
LOCUS       WP_258100679             505 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Marinoscillum pacificum].
ACCESSION   WP_258100679
VERSION     WP_258100679.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024816.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13424.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..505
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=57015
     Site            order(61,64..65,68..69,71,99,102..103,106..107,109..110,
                     133,136,144,147..148,151)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          61..88
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          63..309
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          93..127
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          132..167
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          179..203
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <358..503
                     /region_name="CsgD"
                     /note="DNA-binding transcriptional regulator, CsgD family
                     [Transcription]; COG2771"
                     /db_xref="CDD:442052"
     Region          <447..503
                     /region_name="CitB"
                     /note="DNA-binding response regulator, NarL/FixJ family,
                     contains REC and HTH domains [Signal transduction
                     mechanisms, Transcription]; COG2197"
                     /db_xref="CDD:441799"
ORIGIN      
        1 mklllqvlia fvlfgsssly aqdfeqelkr ahdaqnpnvs iaalgkiked lsqvsdslkl
       61 qfylamgiay gqlgrsdssl fylsqveala ndssrvlida wntkglvyms sgdfeeslnq
      121 fhkalrlaet kdeeeikiik iignaagvfy qledfssaie ymeraislse svglnhgvgv
      181 snlrlaiiym dmdslqrsie hlrvseqila eerdtimlly akntlggilq rqnlnqealk
      241 efqvserlam aisntediif akasiaelyl tinqfdkaeq fskevlelas angfmdrvgq
      301 ahdllyqiym tnqsykqali hrnaslaind sisgvevksr iaeletkyet ekkeaeieql
      361 slenslhean larsrnaqla igigsvltii lvivfftlrh krhvaereaq elqiealqkr
      421 vmeiqsssdt finisldqfn qklhndlter efeilrlsle nktnseisee lfisvstvkf
      481 hlrntyaklg vnnrkeafey vakka
//
LOCUS       WP_258100687             111 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Marinoscillum pacificum].
ACCESSION   WP_258100687
VERSION     WP_258100687.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017416.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05598.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..>111
                     /product="transposase"
     Region          8..>111
                     /region_name="COG3666"
                     /note="Transposase, IS1182 family [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:442883"
ORIGIN      
        1 mrnsnlvfkd ytpsqvmllp psleelieen hpvrvvnavi dqinvepllk qykpggtsvy
       61 hprmllkvlv ygyltniyss rkleaalken ihmmwlsamn rpdhntiarf r
//
LOCUS       WP_258100794             215 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Marinoscillum pacificum].
ACCESSION   WP_258100794
VERSION     WP_258100794.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 215)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..215
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=24288
     Region          6..196
                     /region_name="PRK15369"
                     /note="two component system response regulator"
                     /db_xref="CDD:185267"
ORIGIN      
        1 mfepselslv iaddhplllq glkdtlehyh fkqintcsng tsaleaiiqh kpdlaildie
       61 mpylsglava eeckkrgidt kviilsyhke ykfvakakal nisgyilked ttteiykcle
      121 qvyynkfyys psiseevass dlitqklqql spselkilkl iadslgsqti aemlhisert
      181 vekhrsniit kldiakqpns lsiwaieqrh vieel
//
LOCUS       WP_258100827             752 aa            linear   BCT 02-MAR-2025
DEFINITION  cellulase family glycosylhydrolase [Marinoscillum pacificum].
ACCESSION   WP_258100827
VERSION     WP_258100827.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012377.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00150.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..752
                     /product="cellulase family glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0000272 - polysaccharide catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=80468
     Region          25..300
                     /region_name="Cellulase"
                     /note="Cellulase (glycosyl hydrolase family 5); pfam00150"
                     /db_xref="CDD:395098"
     Region          <363..738
                     /region_name="YjdB"
                     /note="Uncharacterized conserved protein YjdB, contains
                     Ig-like domain [General function prediction only];
                     COG5492"
                     /db_xref="CDD:444243"
     Region          514..575
                     /region_name="Big_2"
                     /note="Bacterial Ig-like domain (group 2); pfam02368"
                     /db_xref="CDD:396788"
     Region          681..752
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mriivfivvi cffspvfaqv eyagvnlaga efgdgslpgt vnrdyvypth eevdyftskg
       61 mntfrvpfkw ermqrtlnge ldadelsymd dfveyatske ayvvldphny arwygeiigt
      121 davpvsafgd fwsrlashyk dnsyvifgim nepydmstel wledanvaiq airrtgahnl
      181 llvpgnawtg ghswthdwyg tpnaevmlgi vdsldnyaye ihqyldsdys gtspecitaa
      241 easeklidft nwakengkra flgefgvadn sncyealegm ldymyanndv wmgwtwwaag
      301 pwwsnyifll epgsggedkp qmsalepyin pvliesivlt gdaemaigsq qsltaeigpe
      361 nhtistltws ssdtdvvtvd aegtvsaval gtaditatas dgsevsasft isvtpvlves
      421 lsisgepemn pgdtqvliat aapdeatdpt vswassdadi atvdesgmvt aiaegtveii
      481 atandgsevs asftvnvgpv lvesvaitgd aemqveetqv lsatvtpgda adqsvvwssa
      541 ntsiatvdqn glvtaiavgt vdivatanda sgatstfvit vnpvllesvs ingvstmivg
      601 eaqyvtvtta pdnaadetvs wsssdpeiat vdyigfvsaq aegevvltal andgsgtsat
      661 fsltinaapl plgeqvenll iwpnptsell ylevpavyga avysiydvsg kliqsntleq
      721 pttvdvsdfe kgvylieikg ekdstkrrvv ve
//
LOCUS       WP_258100835             851 aa            linear   BCT 02-MAR-2025
DEFINITION  GEVED domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258100835
VERSION     WP_258100835.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 851)
  AUTHORS   Back,C.R., Sztukowska,M.N., Till,M., Lamont,R.J., Jenkinson,H.F.,
            Nobbs,A.H. and Race,P.R.
  TITLE     The Streptococcus gordonii Adhesin CshA Protein Binds Host
            Fibronectin via a Catch-Clamp Mechanism
  JOURNAL   J Biol Chem 292 (5), 1538-1549 (2017)
   PUBMED   27920201
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039776.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20009.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..851
                     /product="GEVED domain-containing protein"
                     /calculated_mol_wt=89297
     Region          68..308
                     /region_name="ZnMc_pappalysin_like"
                     /note="Zinc-dependent metalloprotease, pappalysin_like
                     subfamily. The pregnancy-associated plasma protein A
                     (PAPP-A or pappalysin-1) cleaves insulin-like growth
                     factor-binding proteins 4 and 5, thereby promoting cell
                     growth by releasing bound growth factor; cd04275"
                     /db_xref="CDD:239802"
     Site            order(225..226,229,235)
                     /site_type="active"
                     /db_xref="CDD:239802"
     Region          341..>608
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          519..>721
                     /region_name="COG3979"
                     /note="Chitodextrinase [Carbohydrate transport and
                     metabolism]"
                     /db_xref="CDD:443178"
     Region          781..851
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mkkpfllmaa mlymafttva qdrracaade vyerqnnnpk vrelrsriee qtqrfmangg
       61 qssartgilt ipvivhviyn tsqqnisdaq iqsqidvmte dfrllnsdvg lipsefapla
      121 sdiqiefsla qitrkqssra swgtndamks ssqggvdvvn pdeylniwvc nigggilgya
      181 qfpggpastd gvvispnyfg sidkqaagqn fylsspfnkg rtathevghy lnlrhiwgdg
      241 gctvddfvsd tptagaanyg cpsypskscs snggftsdmf mnymdyvdda cmfmfsagqk
      301 armdalfepg gsrenlgsss ggcslaapss lsssniqdns ftlswgsvsg aasydvnvdg
      361 tvtntsstsi sitgltagtt ysvqvrsvcs dgtkgaysag fsitttgsnc negpvtlslt
      421 ldnypsetsw tltkdgstva sgsgystngq titenfdfga gsysftinds ygdgiccsyg
      481 sgsysltddn nnvivsggaf gnsestsfcl egssggdtqa pttptglsss nvstssvtls
      541 wsassdnvgv tgynvyqngs liasptatnl svtglspett ysftvtaeda agnvsaassa
      601 lsvttdaivi tyctssgnns syewidlvql gainnssagn ggygdftsqs ttlapgssnt
      661 vyfsagfsgs sysenwkvyi dynqdgdftd sgetvvtgts sngstysgnf tvpasaslgs
      721 trmrvvmrwn staqscgsfs ygevedytvv issgsrgmgs madapaserl sdnaadgmfm
      781 vypspavntl gielgefkei skvrifdlgg qlmksgtpte nkldvsdlks glylievtte
      841 rgkfetkflk e
//
LOCUS       WP_258100917             360 aa            linear   BCT 02-MAR-2025
DEFINITION  alkaline phosphatase family protein [Marinoscillum pacificum].
ACCESSION   WP_258100917
VERSION     WP_258100917.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 360)
  AUTHORS   Jin-Hua,P., Goding,J.W., Nakamura,H. and Sano,K.
  TITLE     Molecular cloning and chromosomal localization of PD-Ibeta (PDNP3),
            a new member of the human phosphodiesterase I genes
  JOURNAL   Genomics 45 (2), 412-415 (1997)
   PUBMED   9344668
REFERENCE   2  (residues 1 to 360)
  AUTHORS   Peiffer,W.E., Desrosiers,M.G. and Menick,D.R.
  TITLE     Cloning and expression of the unique Ca2+-ATPase from
            Flavobacterium odoratum
  JOURNAL   J Biol Chem 271 (9), 5095-5100 (1996)
   PUBMED   8617788
REFERENCE   3  (residues 1 to 360)
  AUTHORS   Deissler,H., Lottspeich,F. and Rajewsky,M.F.
  TITLE     Affinity purification and cDNA cloning of rat neural
            differentiation and tumor cell surface antigen gp130RB13-6 reveals
            relationship to human and murine PC-1
  JOURNAL   J Biol Chem 270 (17), 9849-9855 (1995)
   PUBMED   7730366
REFERENCE   4  (residues 1 to 360)
  AUTHORS   Murata,J., Lee,H.Y., Clair,T., Krutzsch,H.C., Arestad,A.A.,
            Sobel,M.E., Liotta,L.A. and Stracke,M.L.
  TITLE     cDNA cloning of the human tumor motility-stimulating protein,
            autotaxin, reveals a homology with phosphodiesterases
  JOURNAL   J Biol Chem 269 (48), 30479-30484 (1994)
   PUBMED   7982964
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01663.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..360
                     /product="alkaline phosphatase family protein"
                     /calculated_mol_wt=40983
     Region          1..>292
                     /region_name="AtaC"
                     /note="c-di-AMP phosphodiesterase AtaC or nucleotide
                     pyrophosphatase, AlkP superfamily [Signal transduction
                     mechanisms]; COG1524"
                     /db_xref="CDD:441133"
     Region          <245..353
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
ORIGIN      
        1 mikkltlgff lllslqvfaq kkspkviwit ldglrwqelf tgadsslvgd sgytehlddl
       61 akefwtndpl qrreilmpfv wstlveqgqi ygnrelgnkv dcsnqmrfsy pgyneiltgf
      121 addenirsnd kilnpnetll eyvnkqngfe nkvfafgswd vfpfiineer sgvpvnagfe
      181 kanesltere rflnelqdev igpwgnvrld vfthhyamec lkskkpklmy iaygetddya
      241 hdgkydhylk sarqtddyia klwayvqsdp fykdqttlii ttdhgrgtvp kdawryhgeg
      301 tpessqiwfm amgpnvpalg evktnaqlyq nqvaatvaea lgvsynqska gesipsvfkk
//
LOCUS       WP_258100935             121 aa            linear   BCT 02-MAR-2025
DEFINITION  phage holin family protein [Marinoscillum pacificum].
ACCESSION   WP_258100935
VERSION     WP_258100935.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018980.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07332.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..121
                     /product="phage holin family protein"
                     /calculated_mol_wt=13571
ORIGIN      
        1 mavinklvdk isdfirlkge kikldiiaqv skllahfvaf mtmavvgffl liflsialaa
       61 ylnyvlesph fgylivggiy ligliiiill lrsnklqnwl etlflnlses iqdesddeke
      121 i
//
LOCUS       WP_258101002             531 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Marinoscillum
            pacificum].
ACCESSION   WP_258101002
VERSION     WP_258101002.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 531)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 531)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 531)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 531)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..531
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=60052
     Region          1..531
                     /region_name="PvdE"
                     /note="ABC-type siderophore export system, fused ATPase
                     and permease components [Inorganic ion transport and
                     metabolism]; COG4615"
                     /db_xref="CDD:443659"
ORIGIN      
        1 msfvwkylkg sltgliiatl mstlsglgiv yimrsfhqav kkgldnptmf ftsvgigllv
       61 fivfglisek tlsritnrii lemridfsnl ifqseyeeve gkkkelfssm isdinglsri
      121 ieklpganrn fvialagiiy lvtiswlltl imiaffgvty liilrrnvla ykltmssrks
      181 wdavynnihd iiygikelsl nssqkdtfie nhlkksgeie aqnkislrff nqatgkmset
      241 vmilgiccmi llsisvdvln msafaeflti slfivnplss vsnftkdlvp lkvytthiqe
      301 igielsnakd dsqedriele sinqfislqn aeytyrrgdd shfhlgpvsm eipanqitii
      361 ygsngsgktt lskviaglyk iekgqlvygn eqinrnnlqs frnkisavfa dnhlfknndi
      421 sqdqlprvqe llqlfsidnh vqienntvih kglstgqskr lalvlsmiae keiyifdewa
      481 anqdpqfkka fyhqlipqlk eegktvilit hddqyfdiad hkihlqegkv v
//
LOCUS       WP_258101029             801 aa            linear   BCT 02-MAR-2025
DEFINITION  carbohydrate-binding protein [Marinoscillum pacificum].
ACCESSION   WP_258101029
VERSION     WP_258101029.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015387.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03422.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..801
                     /product="carbohydrate-binding protein"
                     /GO_function="GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /calculated_mol_wt=88839
     Region          107..374
                     /region_name="BglC"
                     /note="Aryl-phospho-beta-D-glucosidase BglC, GH1 family
                     [Carbohydrate transport and metabolism]; COG2730"
                     /db_xref="CDD:442036"
     Region          454..575
                     /region_name="CBM6_cellulase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); appended to
                     glycoside hydrolase (GH) domains, including GH5
                     (cellulase); cd04080"
                     /db_xref="CDD:271146"
     Site            order(470,478..484,537..544,568)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:271146"
     Site            order(487,489,491,520,522,561)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:271146"
     Region          585..706
                     /region_name="beta-trefoil_FSCN_ZgPorA-like"
                     /note="fascin-like domain, beta-trefoil fold, found in
                     Zobellia galactanivorans beta-porphyranase A (PorA) and
                     similar proteins; cd23342"
                     /db_xref="CDD:467450"
     Region          728..801
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mmnhnvlqqi vkarsctrqs nellksrsvt rflsaiilfl mvslsfsaqa qyvkaqgtqi
       61 ldengapiyf rginlgnwll wegylmmgdf eyrthtqffd giknavggdl gqaiefehqw
      121 rmnyvneqti idlknlgfns vripfhfnlf wdygsygvtn rgfqyfdrvi nwcrahdmyv
      181 lldmhaapgy qnpgdhsdnv nsnssqprss vtfwdgdnvn iaaqvwhhia dyyknepvvw
      241 gydlinepvp qpgreyellp slltirnair qvdnnhviva egswwgsdmq kldwqdpsvq
      301 sstginyrwd nnlvyqthhy sddvsqlngr kdltnrlnvp lmlgeygent nsklremtdw
      361 cinnnvayfp wsfkkmyhdr ciwtinpnga ynsvrdyiky ggsppanayn nliafcqnni
      421 gngasgitfh qgyydavkyt gasggcqgny qsigtiqaes fcdmqgvqte ntsdtgggsn
      481 vgwldagdwm gyrvnipssg aytieyrvas qggggsiqle slgggssygs inipstggwq
      541 swttishsvn lnagnqdlal silaggfnln wfrisssgtt gaptgqviwl rgsngqyvss
      601 engqggmncn rgsvggweqf tvvavgsnqi alqgtnglyv ssgngqsvmt cnstsvsgwe
      661 aftwedlgnn tvalrgfgnq yvssengisn mmcdrasigg wetftwgtgs garwssedlt
      721 hqktevliyp npvtseyqid lssagveeas vrwrdlsgrq vvskkvqsgn kyslphgvik
      781 glyvieietd nqlitrrivv k
//
LOCUS       WP_258101154            1631 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA repair ATPase [Marinoscillum pacificum].
ACCESSION   WP_258101154
VERSION     WP_258101154.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023874.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12458.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1631
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..1631
                     /product="DNA repair ATPase"
                     /calculated_mol_wt=186516
     Region          31..469
                     /region_name="DUF3686"
                     /note="ATPase involved in DNA repair; pfam12458"
                     /db_xref="CDD:432568"
     Region          <497..>848
                     /region_name="235kDa-fam"
                     /note="reticulocyte binding/rhoptry protein; TIGR01612"
                     /db_xref="CDD:130673"
     Region          1222..>1302
                     /region_name="ruvB"
                     /note="Holliday junction branch migration DNA helicase
                     RuvB; PRK00080"
                     /db_xref="CDD:234619"
     Region          1269..1410
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            1273..1280
                     /site_type="other"
                     /note="Walker A motif"
                     /db_xref="CDD:99707"
     Site            order(1274..1281,1341,1389)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:99707"
     Site            1337..1342
                     /site_type="other"
                     /note="Walker B motif"
                     /db_xref="CDD:99707"
     Site            1403
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:99707"
ORIGIN      
        1 maekeanqsq nleagtyell rgrinnhsgv lkerltalne erktvfgtie tkvlateris
       61 tsnncipwdm ysfenkllfg ynvhvglrse vqigdvfsfy eyqsdrsfge skvesllsdk
      121 tflddfhkly kyykhakflr fatvgpylym vfrigrdvad vktfkwqvng dkltyidnrs
      181 dheykfppqh efewtkttrd dfregvhphv sikdrvfvec vggdltikie dntadgqgiy
      241 redvvnkdqt lvdadfayse ignlilikak pyqekeryli fneklhevkr ldiiaescvl
      301 lpddqglmfs kgyylqsgef kifdiglenm lferritsin gedfiyvfyn reegiyllln
      361 yniisqsvds piichgftif engemclfka daepkkhhai qiwqtpftsp dfqikkpsds
      421 flqkignkev vsamaecqdv inllsrddiy adlyldvikk atdvidtyhw lsttgeydlg
      481 splkeirqva esavreyekv rkiqesssqr leelheqrkq ilkkakasfg sinayvdlls
      541 tirevrgavi takemryidq gkldqfnedl snasdtvses cvrflmqeha lkpfeekvte
      601 fkaqieavek vvladelltk gdkianeldl lietvsnlki tdatqttdii ekisdiygry
      661 nqskgalanr rkkllfeegk aefaatikll eqsvtnyldi sdspeqcdey ltklvvqiee
      721 legrfaefpd fldlitqkre evynafeskk vylteqrnkk anqlfqsaer ilkavrnkad
      781 tikskqeing yfasdlmvek vrnvvsqlvk mgetvkgddl ssqlktiqed virqlkdrqe
      841 lfvdgenvlq mgghkfytne laldltivvk nkvpcfhlag tdffepiene elkalghlwd
      901 qslvsenenv yrseylafql ynqlisigsk dsltvekyla kseeeqlsyi qkemnsryqe
      961 gyvkgihefd tllilnklie lsqaagvirf tpacralasf fwtkclddak rdlflrqira
     1021 aavvlsvfpg nkdfediidd lehelsqcep tyyshqikys eaakylfeel lsgdeftist
     1081 gaaelyqafn khlkskkadl efqrsldaie vpnltvrmir qwlksympes dvdlsayide
     1141 vavlilnksf iesrvkkisv vadlehlkgs heviqdgnyh fhlsdflqkq atyveevvpg
     1201 ylrlqqlkkq lsedykkelr lesfrprvls sfvrnklidk vyfpliganl akqigtagea
     1261 krtdlmglll lisppgygkt tlmeyiasrl gvvfmkingp aighevtsld padapnaasa
     1321 eeleklnlsf emgnnvmiyl ddiqhcnpef lqkfismcda qrkiegvykg ktktydfrgk
     1381 kvcvvmagnp ytesgdkfqi pdmlsnradi ynlgdvigds eevfklsyie nsltsnsils
     1441 rlasrsiddi hgvikmadtg ssegidfqgn htveeleeyv aivkhlsvvr dvilavnmly
     1501 iksaamsdey rvepafklqg syrdmnkite kvlpmmthqe vvgvvqshye neaqtltsna
     1561 eanilkfkql tnemdevake rwqhilenfm kqqklkgygq naqlvegies iadklhdisg
     1621 kiggasttkk k
//
LOCUS       WP_258101269              98 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6787 family protein [Marinoscillum pacificum].
ACCESSION   WP_258101269
VERSION     WP_258101269.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042899.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20584.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..98
                     /product="DUF6787 family protein"
                     /calculated_mol_wt=11773
     Region          21..98
                     /region_name="DUF6787"
                     /note="Family of unknown function (DUF6787); pfam20584"
                     /db_xref="CDD:466733"
ORIGIN      
        1 mgwidklqnr wnlkngwqvv ivlvvfactg ftvlflkkpi vafftsegeq niwftviyyi
       61 lilpiynvil lfygfvfgqf qffwqfekrm wnrmtgrk
//
LOCUS       WP_258101315            2656 aa            linear   BCT 02-MAR-2025
DEFINITION  MBG domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258101315
VERSION     WP_258101315.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037085.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18676.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2656
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..2656
                     /product="MBG domain-containing protein"
                     /calculated_mol_wt=288564
     Region          1577..1652
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          1658..1733
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          1739..1805
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          1820..1886
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          1902..1976
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          2063..2138
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          2144..2218
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          2309..2384
                     /region_name="MBG_2"
                     /note="MBG domain (YGX type); pfam18676"
                     /db_xref="CDD:436658"
     Region          2578..2656
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mknlllvfav lviastatan dyywvggsgd wsdyenhwat ssggssfhss vptssdnvyf
       61 deqsfttesn iltidvdatc fhldwsdvnt lalvrgnmdi dvyadltlnk stdysgfygn
      121 frlrsnvttn idtdanatll stsssyggls ffgsgvfils dsvnsgninv ynnaelding
      181 qyldihrfys sssfvghvdf tdskvnvnfl dlysegetaf nfdnstlnia srlilgngty
      241 efagvtlsga qmtmnagtsa lidfahltln qnlqlsitpg silkitevta ngtpiepiil
      301 rttspgqvas lssetgvhef dyvilediqa vggatfnatn svandlstgw nvtapesldy
      361 ywvggtgnwd eyethwatss ggstfysrpp srydnvhfda nstssigtay vyltydnktc
      421 qnfdaseite nlslsysrfm eplsvygdvs lssqmntsnl mgffnmmsne nttittdnlh
      481 wngvnggfkf ygdgpfdivd slivpnvlfy nqsevdlsdk yisgnsfaly sgyngtldls
      541 nstidvaife driassvgvf ydmsldgtsi avsqvflsyn afqnygkvti npggvsemrf
      601 snytndeilf dtliiqpgai vrvpdglnlk tsslkaegnr kdfitissde egkqfsfeis
      661 egtidgkyld lrdcegkgga tfnanysidn gnntnwtfsd ippldyywvg nsgnwsdvnh
      721 wattsggdvi hatppsridr vyfdqnsfte aeqlvtldsd vefgglslde vanspgfqae
      781 agievnvhgh fvlnssvdfs nfkasiytks dldstsidfd gnssfyntnl yfegsgnyyl
      841 ngdinfysvt vnddvnidfn gyqvdlgffa ihgsakgsvd fstseiytny fsngidffdq
      901 sefeldadss siyvrssfsw ysdqynygdl tltndnpqvf lnnyyytdln laklniepga
      961 tvslpdghki iceeltaign knqiinihse derfqaiivt dsallkaeyl nlkniksese
     1021 killarysed lgnntgwqft kpldatyywv ggsgdwsdvn hwatssggss lhrylpskyd
     1081 qvifdensfs evdpqinldt tgnmknldms gismpvelim esqknlnvyg dlrlssdlti
     1141 ngvynqvnlt ssdsafiemn gfengnylsf nidgegaytl qsdfvgysln frrgrfymng
     1201 hdinlnylnl yrdfegvidf sgsnltisyl nleeikssei niiedeltvf niirsfsfrs
     1261 gysfnhlvlg geasfrfggs yassitvnkl glkagtsytf rrsttnidei wlqgtsesit
     1321 nitsyyddqp ftfiktngev slgqvylkdc hasggatfsa vnstdggnnt gwnfisddtg
     1381 psfisgypqi tdltgnslia svalneigkv gyvvqetgms aptveqilag rngsnnlani
     1441 sgeiavpssn tstqsvigsl mpvtsytiyf aaedvggtaq tsassiaftt skanqvlsln
     1501 pfgtkrygss efeitavsns gltvnvssnn peilsisgnt asvhgagevv ltlsqagnaa
     1561 yedatkqvti niqkatlsis vadankvygq enpsftfdyq gfigtddesi ldetpeatts
     1621 anelsvagty niniqelmde nyeivplpgi ltiakksltv stgnyqrayg genpsfiley
     1681 sgfingdnae glesvpvvip natrsssvgv yaitisgged srydfeaspg qltvtkaelt
     1741 ptlssltkvy gednpvlefg fsgfvngesr dvldvlptat isttsasnag sypvtvtsga
     1801 dnnyewtldd ysfeitkasl slvmddytkv ygaanpgfsf sydgfvngdd esdldelpsv
     1861 tseassssdv gtyallvsgg sdnnynysis adadltitka plsvsvgdyt kvygesnpvf
     1921 eiefdgfvne ddesdlsdef gvsttagqfs svgtydltft gltqtnyeve stdgsleivk
     1981 atlnlevids qsaygedivi dftysgfvgn dnaanldeep vlgvenaadp gtyevvftee
     2041 gednnytfsl pddvsheitk atlvatvsns sktygesnpe feisfsgfvl desvedllei
     2101 ptietladet spvgvypltl sevsdphyiv elidgeftit kallsvivnd twkyagevsp
     2161 eltyeisgfv nnenvdvitq lplittevti esapgeyvis asnamatnyd fdyisgvfyv
     2221 lseaqqvilf plvadkrygd eafelnatas sglavvmess desilsvseg iatihgvgev
     2281 titvsqsgdd efdpsasvsr sfvinkaeln viaddqqity gdelpeltlt yqgfvysenv
     2341 esfivapvgm lssdtiseag eyeiliseas sdnydisyel gtlsilkasq visvdsienk
     2401 litdepfeit asvssdllls yqisgpatiq delitlngee glveitisqs gnknfeaaen
     2461 vtvqffvddp tsnfapelet inpllvtvge ivsfnvigsd edihdqlhyt ldqisvdkgm
     2521 eigelsgafl wrpelqdvgs htlvvsvsdt ketvsitlei evvsntlsad adgmsvvlyp
     2581 teiendltls itdsqtgqvs vqilnlfgqv iqqeiyqkdl lskevlievn pdltsgvyia
     2641 lvrfgnrtht qriikk
//
LOCUS       WP_258101319             214 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Marinoscillum
            pacificum].
ACCESSION   WP_258101319
VERSION     WP_258101319.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..214
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=23764
     Region          1..197
                     /region_name="PRK10651"
                     /note="transcriptional regulator NarL; Provisional"
                     /db_xref="CDD:182619"
ORIGIN      
        1 mqekidivia ddhglirygl ikllsevedf rvideagngs dalalvrkwk pkvliadlfm
       61 pelsgieiaq niineglpts vliisasyde dnvisayqng algyifkgsn ealiisavrk
      121 vaqhetfysq lvmnilgnqh qkkssqsitt ayqltrrelq ilkllaegvt nkeiaydlnl
      181 strtvdahrr nimeklsvsn taqlirvsie knli
//
LOCUS       WP_258101401             568 aa            linear   BCT 02-MAR-2025
DEFINITION  carbohydrate-binding protein [Marinoscillum pacificum].
ACCESSION   WP_258101401
VERSION     WP_258101401.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015387.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03422.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..568
                     /product="carbohydrate-binding protein"
                     /GO_function="GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /calculated_mol_wt=62630
     Region          59..272
                     /region_name="ManB2"
                     /note="Beta-mannanase [Carbohydrate transport and
                     metabolism]; COG4124"
                     /db_xref="CDD:443300"
     Region          343..464
                     /region_name="CBM6_cellulase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); appended to
                     glycoside hydrolase (GH) domains, including GH5
                     (cellulase); cd04080"
                     /db_xref="CDD:271146"
     Site            order(350,375,377,379,409,411,450)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:271146"
     Site            order(357,365,367..372,426..433,457)
                     /site_type="other"
                     /note="ligand binding site I [chemical binding]"
                     /db_xref="CDD:271146"
     Region          487..566
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     cl46851"
                     /db_xref="CDD:481191"
ORIGIN      
        1 mkslriigvl mllaissfaq tpyeslnyly sirgnttigg ihnrqpisnp nqysqqlnsi
       61 tgdwpglyss dfmfesweid drqtminqvi newnngamin lmwhacnpvs geacnwdgng
      121 vlanlsnsqw ndlltngtai nnrwkammde vatllqqlen agvevffrpl hemnqgmfww
      181 ggrpgsggta alyrlthdyf tytkglsnli wvwnlqdfgs lssdlnnydp gwnywdvltm
      241 dmywsdgqgy ssskynalvn kaagkpigig ecedlpavnl lnqqplwtff mgwseltfsg
      301 nsnqkiqdif wsgkvrvlde mpgwngtgsw qnggggtggt qyiqaesynn msgiqtepts
      361 dpgggnqnvg wvdagdwlty dginipssgn ysiayrvasq ngggviqleq agggpvygti
      421 nvpatggwqt wttiyqtvyl nagtqsfgik anaggwnlnw waitpasgsr iaepttelat
      481 qqklraypnp ftkevaipve wdgetdftvr ifdvsgnvir tlnmdhlsnq keviwdgang
      541 agsivskgny ffqyqsgrna asgklike
//
LOCUS       WP_258101435             408 aa            linear   BCT 02-MAR-2025
DEFINITION  M20/M25/M40 family metallo-hydrolase [Marinoscillum pacificum].
ACCESSION   WP_258101435
VERSION     WP_258101435.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 408)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013696.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01546.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..408
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=44439
     Region          30..304
                     /region_name="M28_like_PA_PDZ_associated"
                     /note="M28 Zn-peptidase containing a protease-associated
                     (PA) domain insert and associated with a PDZ domain;
                     cd05663"
                     /db_xref="CDD:349913"
     Region          323..407
                     /region_name="cpPDZ_Deg_HtrA-like"
                     /note="permuted PDZ domain of Deg/high-temperature
                     requirement factor A (HtrA) family of housekeeping serine
                     proteases and related domains; cl49614"
                     /db_xref="CDD:483954"
ORIGIN      
        1 mrfisalilg sfliscqqqp esttsiyddi qvlasdslqg revgtegerm aaaylvsrfk
       61 siglepkgtn dylqsffvkd adnpheqakm savdsikgie grnviafqdn pgdnliivga
      121 hydhlgyggf sslhrgdtai hngaddnasg vaamlaiaqy fkknppnsdl lyiafsgeek
      181 glwgsnyfvk nptidltnan fminmdmvgr ldtakgiaih gtgtapvwse vidqsntvgl
      241 kvikkesgvg psdhtsfylq dipvlhfftg qhsdyhkptd dadlinidgi qkiathieni
      301 isnldnepkl afqktkdest qgprftvtlg vvpdylfdgk gmkidgvsed kpaqkaglek
      361 gdvvlqmgds titdmmsymq alsafykgde tkvvidrnge elifditf
//
LOCUS       WP_258101450              82 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6364 family protein [Marinoscillum pacificum].
ACCESSION   WP_258101450
VERSION     WP_258101450.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039417.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19891.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..82
                     /product="DUF6364 family protein"
                     /calculated_mol_wt=8662
     Region          1..75
                     /region_name="DUF6364"
                     /note="Family of unknown function (DUF6364); pfam19891"
                     /db_xref="CDD:466224"
ORIGIN      
        1 mstkltlsid eevvrkakey skasgrslss liesyliglt ssgdannevs tpltsrllgs
       61 ikgngsvdie kvltdnwkat dd
//
LOCUS       WP_258101451             136 aa            linear   BCT 02-MAR-2025
DEFINITION  PIN domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258101451
VERSION     WP_258101451.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024861.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13470.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..136
                     /product="PIN domain-containing protein"
                     /calculated_mol_wt=15328
ORIGIN      
        1 mikafidpdl ileflmdkqp qsresakift laernevkll vsaqafsnly lilkqyashe
       61 kvveklqllt qlvevgtldq kavlsalnsn fnnlidgiqn ycvesnnvkv litrrhkdyk
      121 nsglsimspa lflemv
//
LOCUS       WP_258100218             475 aa            linear   BCT 02-MAR-2025
DEFINITION  neutral/alkaline non-lysosomal ceramidase N-terminal
            domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258100218
VERSION     WP_258100218.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 475)
  AUTHORS   Inoue,T., Okino,N., Kakuta,Y., Hijikata,A., Okano,H., Goda,H.M.,
            Tani,M., Sueyoshi,N., Kambayashi,K., Matsumura,H., Kai,Y. and
            Ito,M.
  TITLE     Mechanistic insights into the hydrolysis and synthesis of ceramide
            by neutral ceramidase
  JOURNAL   J Biol Chem 284 (14), 9566-9577 (2009)
   PUBMED   19088069
REFERENCE   2  (residues 1 to 475)
  AUTHORS   El Bawab,S., Roddy,P., Qian,T., Bielawska,A., Lemasters,J.J. and
            Hannun,Y.A.
  TITLE     Molecular cloning and characterization of a human mitochondrial
            ceramidase
  JOURNAL   J Biol Chem 275 (28), 21508-21513 (2000)
   PUBMED   10781606
REFERENCE   3  (residues 1 to 475)
  AUTHORS   Tani,M., Okino,N., Mori,K., Tanigawa,T., Izu,H. and Ito,M.
  TITLE     Molecular cloning of the full-length cDNA encoding mouse neutral
            ceramidase. A novel but highly conserved gene family of
            neutral/alkaline ceramidases
  JOURNAL   J Biol Chem 275 (15), 11229-11234 (2000)
   PUBMED   10753931
REFERENCE   4  (residues 1 to 475)
  AUTHORS   Okino,N., Ichinose,S., Omori,A., Imayama,S., Nakamura,T. and Ito,M.
  TITLE     Molecular cloning, sequencing, and expression of the gene encoding
            alkaline ceramidase from Pseudomonas aeruginosa. Cloning of a
            ceramidase homologue from Mycobacterium tuberculosis
  JOURNAL   J Biol Chem 274 (51), 36616-36622 (1999)
   PUBMED   10593963
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016612.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04734.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..475
                     /product="neutral/alkaline non-lysosomal ceramidase
                     N-terminal domain-containing protein"
                     /calculated_mol_wt=52560
     Region          69..>276
                     /region_name="PTZ00487"
                     /note="ceramidase; Provisional"
                     /db_xref="CDD:240437"
ORIGIN      
        1 msetkevrlk ifanllkmlr ylskillglf lillvlvisv vklvdrspye eqafyqemdq
       61 rldslnshfs vpidtvtlqv gwsevnitps tnlplagyga rdpktmegvl dssfiravvy
      121 qldarklami fsdllvihpe lrnavfeslp sgwqrheiyf taththsgqg awapgvvgdl
      181 fagaydpqqv vilsdktlea inkatanlkp gavqfgelsv dnlvrnrlvk ekgitdpwlk
      241 varlqsdtlv ghiavfsaha tcfgadnhll asdypgelvr mlnepfdfga yaagavgsma
      301 vntngdspke kieevasgln eqvqllslig ldqlpiqqlt sfrlnlpmrd pqvkltnsla
      361 lrpyifnmsf geysndisva vlgqaifigl pcdfsgelav plyeqaralg yqlfitsfng
      421 gyagyvikde wydlskyear tmswygpdag sylsevisrl iqiihennet nparr
//
LOCUS       WP_258101462             690 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 C-terminal domain-containing protein
            [Marinoscillum pacificum].
ACCESSION   WP_258101462
VERSION     WP_258101462.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 690)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014026.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01915.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..690
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=75527
     Region          10..690
                     /region_name="alph_arabinopyran"
                     /note="exo-alpha-(1->6)-L-arabinopyranosidase; NF041610"
                     /db_xref="CDD:469494"
ORIGIN      
        1 msidqlvsqm tleekvhmlh gsgkftsagv erlgvpalts tdgplgvree iqndswaaag
       61 wdndfatffp aggglsatwn ldlakqygea igqeararnk hvllapavnl irsplggrnf
      121 eyftedpfln kqlavpyvlg lqaqdviscv khyainnqet lrgsidvqad ertiremylp
      181 vfkaavqegn aysvmsaynq frgaylsend ymlntilrde wgfkgfvmsd wgavhstves
      241 akygldiemg teiddydqwy fsealigavk dgkvdeavid akvknilyam nqvhaidttg
      301 rksgsintpe hlevaynvak esivllknen nllplkddqv ksiavigdna krkhanqgfg
      361 agvktktevt pfdaittkyp nvkvnyaqgy eekylpndld rswglpidys adsnlikeav
      421 eaasnsdvav vfagsnrlve teaedrkglr lpfaqeelia avkaanpnti vvmiagapyd
      481 vsnvheqvda lvwswfngsk agdaivdvlf gvvnpsgklp vtfpkkleds pahatnsfpg
      541 gpdvvtyqeg ilvgyrwfdt knvepfypfg fglsyttfdy sepkvmnngg titlsldian
      601 tgdvagkeiv qvyfgknnss ieraakelkg fakvelkage tqqlsvevpv selayydvet
      661 sswkvesgey tvwvgassrd irsevsvsld
//
LOCUS       WP_258101495             225 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4956 domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258101495
VERSION     WP_258101495.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027640.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16316.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..225
                     /product="DUF4956 domain-containing protein"
                     /calculated_mol_wt=24959
ORIGIN      
        1 mlesltketl yeypsfkval fsillsfvls siiaftyylt nkemafsrnf lqamilsavv
       61 scmvimavgn nvaagfgiig aiaiirfrvt vqnprniifi fstlsvgvas gvygysiala
      121 gtvvfcfiam llhfskfggv tiakecslql ivsneyddrn ipaildeyce yirltnlsst
      181 klgkrlgyfl ilkketdrdq lfatlndeeg isnikierdd nldki
//
LOCUS       WP_258101527             200 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Marinoscillum pacificum].
ACCESSION   WP_258101527
VERSION     WP_258101527.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 200)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 200)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..200
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=23039
     Region          29..197
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(35,59,88,178,181)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(35,178,181)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(35,59,88)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
ORIGIN      
        1 mevinmefes eiedlekkii dfpnkedltv fygsssirlw esleedmapl nvlnlgfggs
       61 sfswciyyfd rlftkikpkh iviyvgdndl angippekvv kkfrtlasli rtsfphtpmd
      121 fitikpspsr tyllpeiklt nslirkelmn vekaslinif dsmlsengva rpelyledel
      181 hmnakgykiw kgvvrkhfei
//
LOCUS       WP_258101571             401 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Marinoscillum pacificum].
ACCESSION   WP_258101571
VERSION     WP_258101571.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..401
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=46095
     Region          1..392
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mkvlhlntlt eggaakalkr lhlnlldfgv dsrvlslykl pegesianwf sllneeislq
       61 ekfirsikyr vrnwtdpyye yssplsifrp eetkliewad vlnlhwianf ihypsffshk
      121 vvatkpvvwr tpdlfpmrgv vhydgyinvk nqkleksake lkmnalsvhe ninvaatssw
      181 tmreakksli fskaksfrli hnglniekfa esnslnqapk nkkqllfvaa rlsnekkgfl
      241 kviqilntik mdgwellvvg egevnyfdaq fairylgnis seqemmaiyr didiyisaad
      301 eeafgqtiie amfcekpvva fgvggildtv mheetgllse lndiegfkkn lillmknkem
      361 rkdfgrngrv raekffsaqv qaekylqyyk dvlnekadrk q
//
LOCUS       WP_258101579             365 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Marinoscillum pacificum].
ACCESSION   WP_258101579
VERSION     WP_258101579.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..365
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=41026
     Region          7..352
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mkerfgivmq dlpgstetfi kahiselqpr fvyygapipq fvnddklqpl fmralrkvaa
       61 vlknetywhd evafekhlkk qsievllaey gvvgayiykt cqklgiklvi hfhgydasmy
      121 svilrlgnry rqmfevatrv vavseemknd liilgcdpqk idvnpygpne eftnvipnyq
      181 snnivsvgrf tekkapdvmi kafarvlkaf pearlrmigd gelkkscedl vvelgladqi
      241 eflgllskdh ickvfedssi fvqhsvqass gdkegspvai meaaaaglpi vstrhagire
      301 tvieeetgyl cnehdvqsfs dnlkkllesk nrreqmgnag rvhiktnfsr qkhigflnni
      361 vsnat
//
LOCUS       WP_258101449             115 aa            linear   BCT 02-MAR-2025
DEFINITION  4Fe-4S dicluster domain-containing protein [Marinoscillum
            pacificum].
ACCESSION   WP_258101449
VERSION     WP_258101449.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 115)
  AUTHORS   Fukuyama,K., Nagahara,Y., Tsukihara,T., Katsube,Y., Hase,T. and
            Matsubara,H.
  TITLE     Tertiary structure of Bacillus thermoproteolyticus [4Fe-4S]
            ferredoxin. Evolutionary implications for bacterial ferredoxins
  JOURNAL   J Mol Biol 199 (1), 183-193 (1988)
   PUBMED   3351918
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024585.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13187.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..115
                     /product="4Fe-4S dicluster domain-containing protein"
                     /calculated_mol_wt=12682
     Region          1..112
                     /region_name="di_4Fe-4S_YfhL"
                     /note="YfhL family 4Fe-4S dicluster ferredoxin; NF033683"
                     /db_xref="CDD:468141"
ORIGIN      
        1 maimitdeci ncgacepecp ntaiyeggve wkwsdgtdlt evemedgsvi dgsedqepvs
       61 defyyivsgk ctectgfhee pqcaavcpvd ccvpdpdyee tqeeldakke wlhve
//
LOCUS       WP_258101632            1093 aa            linear   BCT 02-MAR-2025
DEFINITION  FG-GAP-like repeat-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258101632
VERSION     WP_258101632.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13517.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..1093
                     /product="FG-GAP-like repeat-containing protein"
                     /calculated_mol_wt=114860
     Region          29..100
                     /region_name="TIG"
                     /note="IPT/TIG domain; pfam01833"
                     /db_xref="CDD:460355"
     Region          135..204
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          193..264
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          253..321
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          310..375
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          364..426
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          415..473
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          <495..>1001
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          743..>809
                     /region_name="PKD_4"
                     /note="PKD domain; pfam18911"
                     /db_xref="CDD:436824"
     Region          1009..1091
                     /region_name="CHU_C"
                     /note="CHU_C Type IX secretion signal domain; cl21544"
                     /db_xref="CDD:473906"
ORIGIN      
        1 mrnlivllil gftahytlaq kpivngfdks satvgetivi sganfpttat nlqvnfgsgk
       61 ativstsate iratvpatst ygpvvvtnls nglrgtssqf ftmsfggstf dltaldtrid
      121 intgqqesyd icncdfnddg lldvaiannn stnvsvyqnv stinttsfvq vtginnidnn
      181 lkpintvate csdlngdglp dlvftsvenv nkqifiyqnt ssggtisfsp lptftlpvte
      241 tgtrtprtfk iadmdldgkp eliisdtkdg eneifiyqnt stgaisfnrt spisltvtga
      301 sktgaidvad ldgdqlpdiv tapyvvsssr iyaiknqstv gninfaepva lspvsswrnv
      361 laadvnndnl pdiiatnsns vvialnrgsl gnfnfpssav ittsiaspfg laagdldgng
      421 ladiavtstt nslnilenlg gdtpsfelks istdfntrnv eiadynndak pdlgfthrse
      481 fsafgflsii tnrncispti sptditfctg spftleatns inatynwsft gdvtlqnqsg
      541 neatfivnsg nsatitvgia tndgscstsk seaytltggt ppsapaitns ntgiicggsd
      601 ftlsgpdsse eylwtypdgt tatsqeitis nasvnnagay tlrvksaggc fsnaattnis
      661 vdqppvisii ntgsdvicet stttlqvpdy agysyqwkqg ttnigtdlns isvsetgdyt
      721 vdiisettgc sytasatsit syvlptasfs svdesctnfs vsfdasastg qtgveleynw
      781 efgdggsetg nstshtysta gtytvsltvg ysdlttctsv ttkdiiisdp psaadiiadi
      841 spnpastqkc pedgltltlp nsyqtvnwtf nteditansa dvttldnqde vtvtidvitd
      901 igctvsgttv tvsnfdnsgf vfsspegtvv ndtleladnt ssilvnvdng sdftwspedl
      961 lssttgssvt vfprnrfsti vvsgtdeagc sitsdltiia pgviarksfs pngdniydcw
     1021 eilnssdiqg ctiyiydekg sivfkgdspf tencvwngnl dngsvaapag iyyfvfkcdd
     1081 ssyntsgtiv lar
//
LOCUS       WP_258101474             419 aa            linear   BCT 02-MAR-2025
DEFINITION  glycan-binding surface protein [Marinoscillum pacificum].
ACCESSION   WP_258101474
VERSION     WP_258101474.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 419)
  AUTHORS   Tauzin,A.S., Kwiatkowski,K.J., Orlovsky,N.I., Smith,C.J.,
            Creagh,A.L., Haynes,C.A., Wawrzak,Z., Brumer,H. and Koropatkin,N.M.
  TITLE     Molecular Dissection of Xyloglucan Recognition in a Prominent Human
            Gut Symbiont
  JOURNAL   mBio 7 (2), e02134-e02115 (2016)
   PUBMED   27118585
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037325.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18329.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..419
                     /product="glycan-binding surface protein"
                     /GO_function="GO:0030247 - polysaccharide binding
                     [Evidence IEA]"
                     /calculated_mol_wt=46302
     Region          148..>204
                     /region_name="IPT"
                     /note="Immunoglobulin-like fold, Plexins, Transcription
                     factors (IPT). IPTs are also known as Transcription factor
                     ImmunoGlobin (TIG) domains. They are present in
                     intracellular transcription factors, cell surface
                     receptors (such as plexins and scatter factor...; cd00102"
                     /db_xref="CDD:238050"
     Region          214..418
                     /region_name="SGBP_B_XBD"
                     /note="Surface glycan-binding protein B xyloglucan binding
                     domain; pfam18329"
                     /db_xref="CDD:465713"
ORIGIN      
        1 mkrnnwiykv lpvmmitstf ffascedddg vpleepngsp sinyirvtnp eqsdsllvra
       61 elgagvvimg enlggtrevw fndrlanvnp swvtnetiiv svpsvaplni tdelylvddn
      121 ldtliypfev tipapvvlsa knewpqages liingdyffd vtpitvsfsg gvesvatlln
      181 qnqlevpvpe gaqegpvtvs tnfgsvtstf hvwdsrnvvl nfddlvangw rigmtdnsdg
      241 pidgnylvvg geiganerde gpgapsessk vmeywggsdp nrtenfyply pnsyqeyvmk
      301 fevkvntwyg ghlnfclapp dhtgsnqeiw snsinaraiw apweetgeef stdgewitmv
      361 vpmtefqyfi eapdaivytg nqkfiesaag slstwiigsp entgnyvemy idnirfvqp
//
LOCUS       WP_258101666             198 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase [Marinoscillum pacificum].
ACCESSION   WP_258101666
VERSION     WP_258101666.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017026.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05175.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..198
                     /product="methyltransferase"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=22277
     Region          43..188
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(47..52,69..70,94..96,111)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
ORIGIN      
        1 mnpfysyegi rlkilngvfh pglffsthvf leylktrqls elkilelgag sglisfycsr
       61 egaqvtasdi nqaaiaglrl naernklein vvhsdlfeni aisdfdmili nppyypkepn
      121 ndseaawfcg anfeyfdnlf gqlgnvsslp eilmilsedc dltkiksial nsgfanqqiy
      181 seskwgeeny ifqffrva
//
LOCUS       WP_258101637             501 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4062 domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258101637
VERSION     WP_258101637.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024668.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13271.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..501
                     /product="DUF4062 domain-containing protein"
                     /calculated_mol_wt=57196
ORIGIN      
        1 mkfnkeihly fseldneple gvmkgwvtnf hkflstllsq isrdtvsvkl iseenidsts
       61 iddtavviai ctpaftaspe ltatlntyak klkgnnllls egiarifkvh kspfsedeal
      121 peledvisyd yfmidplsgd aqefrrffgn daersywmkl vdmaydinqv lqdsstgtkt
      181 vqeediprek tvylastgvd mviqrdiikr ellrhgykvl pqhtlpkeig qletqvaedl
      241 hkcrlsihli gedygykpkg seisvvdiqn riasnhtydm vdynktadee kafsrliwvs
      301 pdlknvterq kifiedlksd aaaleeaevl qiplqelksi ireelvtggr fkrehreiag
      361 ydkehnsgak miyliqdksd irdakqlref lenagykvvf psysgdlvdi ryihqenlrr
      421 cdasiiyfgn akeawiktkl qdllkapgfg rdkkllakav yfdgpkpvdl dhfernnami
      481 lgnnggfkpe hlkpfltkle k
//
LOCUS       WP_258101690             150 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3592 domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258101690
VERSION     WP_258101690.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 150)
  AUTHORS   Whitney,J.C., Beck,C.M., Goo,Y.A., Russell,A.B., Harding,B.N., De
            Leon,J.A., Cunningham,D.A., Tran,B.Q., Low,D.A., Goodlett,D.R.,
            Hayes,C.S. and Mougous,J.D.
  TITLE     Genetically distinct pathways guide effector export through the
            type VI secretion system
  JOURNAL   Mol Microbiol 92 (3), 529-542 (2014)
   PUBMED   24589350
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023580.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12158.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..150
                     /product="DUF3592 domain-containing protein"
                     /calculated_mol_wt=17251
     Region          40..>136
                     /region_name="DUF3592"
                     /note="Protein of unknown function (DUF3592); pfam12158"
                     /db_xref="CDD:432368"
ORIGIN      
        1 mrkitksdrt tiylntapfl lgeafciigf impffavmdl ralggllfla iglyivkrki
       61 dtaklgyyvl qhgeksiaei thitntnavh ngrtvkeynf ryeangkmfn heyqsaykrh
      121 lqegerltif ydpknpklcf ipslynlnvy
//
LOCUS       WP_258101707            1205 aa            linear   BCT 02-MAR-2025
DEFINITION  FG-GAP-like repeat-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258101707
VERSION     WP_258101707.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13517.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..1205
                     /product="FG-GAP-like repeat-containing protein"
                     /calculated_mol_wt=135501
     Region          <55..91
                     /region_name="PliI_like"
                     /note="Periplasmic lysozyme inhibitor, I-type (PliI) and
                     similar proteins; cl15236"
                     /db_xref="CDD:449514"
     Site            order(84..85,87)
                     /site_type="other"
                     /note="putative inhibitory loop"
                     /db_xref="CDD:193606"
     Region          <417..>621
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          646..708
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          698..756
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          912..979
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          1130..1192
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     cl46851"
                     /db_xref="CDD:481191"
ORIGIN      
        1 mrsskqlevc ttqkllksfs isliyavlfy csiyqleaqs pvksnftevn levtdvddiy
       61 afdiadinkd gakeliitfn naghgtigea ifnssnscsv ysdhiagdty ltefrngllt
      121 sdftkdnsld iiganggstl niytkndqew ellpghvigs ygnnfelgdf nhdtypeilt
      181 naantnivsy ldshsgwpmt yslneenssw qewvdvdnng ideiftiyrq dysdiseqii
      241 yrydsisdtf itldlnlnid fsnvetftfy dydqdgdkdl ltlppvgseg yslethlyin
      301 dgsfnfsfyk sfpsanraiw hdldndgwad lilessppke nptftilyvt kvffqrglne
      361 fvesdleska ydwrselkls dydndgdtdi ffqyekesfs qgirvcindw adlgnttsap
      421 tvpdnlsnhs ignfanelsw nsssddkcgq ygiyynvaik kddeyvlaps advstgkqfk
      481 tftsnvgsht tlpvnclsdg tyqwavqaid nsgkassfsd fqeftitgrn psspinlsae
      541 tlsdkiisls wdstsdnete yviekrtpnq dqffvlkmip anqtvytdtt fegastliey
      601 rvkavncase seysntvlae tfpmhfsqns kfilsqakgr aanlgdynnd sfldllinyr
      661 deitrdykve lyknvqgqfi psgiffenne lsqlewidyn ndgqldifmv sdsywdktis
      721 vyqnngdngf eqiqldslfe gfenvddlfw inlnndqkrq lifsassefa snnrnifils
      781 fnqdnsvgik eimqgvkllt sptdlnndgf ldfpvlntal tqnnlgylmn kdnltfeyis
      841 mnsgltnfqk tiifaplned tyldavlmgp yyeenqygqs iilsnnqgef iektntnllq
      901 snqneasiaf gdfyndgstd litmgyfels ptqshdgtvl yhnigdyhfe qtfglfeset
      961 qhgqvvtgdi dndgdldiih lgeynytspr ivlfentivd gwgisnaapl pptsltnqtk
     1021 gnsvilswnn gsddltsvdq lsynvalikd dsdtilfpls hsngirkvvg lgnanlnlql
     1081 kidslemgny kwlvqsidgt fqgsefsnsq efeivetnvl nsqvsdkiti ypspaaddvn
     1141 ievnqsigei iiqdllgrti tsrkfessan ktvqlniktl nkglyivmlk nefgeligtn
     1201 klike
//
LOCUS       WP_258101745             633 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258101745
VERSION     WP_258101745.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024486.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13086.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..633
                     /product="AAA domain-containing protein"
                     /GO_function="GO:0004386 - helicase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=72470
     Region          95..629
                     /region_name="TIGR00376"
                     /note="DNA helicase, putative"
                     /db_xref="CDD:273041"
ORIGIN      
        1 mdhsehflhl lqllkkerve drkqyenkir nrsledrkre gvtwypvvvd rsylgtgekw
       61 vlqlertsqt enrhffqags saslflndek rklsasgiis rvnekymtlv lnsddapdwi
      121 degklgvdll fdestydeme rtmismasvr egrlkeltki llgeteprfa slidfrhpgl
      181 ndsqnkalsl idaskdvglv hgppgtgktt tlveaikdtv skekqvlvaa asnaavdlla
      241 ekltqqglrv lrighparvt eevvsctlda rlsehndakm lkelrkkaee frnlgrkykr
      301 nfgkaerqqr kmlldearsl kdeahmledh miydelnkaq viactlvgtn snyikgrtfk
      361 tlfideasqa lepaawipim kseriimagd hwqlpptvks leaakeglsq tifrrvieqw
      421 sadvmlevqy rmhddimqfs nehfyegklr sgdiilqrra lfdqavrfid tagcgfdekl
      481 nqetlstynv eearfvlsrl qeivedvmsr edriptigii apykaqaeil rkyledfgld
      541 qevlkritin svdsfqgqer dimlislvrs npnaeigfla derrmnvamt rarhllvmvg
      601 dsatlssnsf fdqliqnfqs rnlyqsafey lys
//
LOCUS       WP_258101812             886 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Marinoscillum pacificum].
ACCESSION   WP_258101812
VERSION     WP_258101812.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 886)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..886
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=98145
     Region          <146..553
                     /region_name="Tar"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; COG0840"
                     /db_xref="CDD:440602"
     Region          595..869
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
ORIGIN      
        1 mndgvftadv idilqitgyv tlitvvslli iyrnfkgsfl fiicliltvi saelavvsya
       61 agkfgfiyfv yaspfivlqf flgmrwtfhk vhhplfrvik riklmskgev dvnfeeints
      121 hrtdeigsit naltshvnfl kstthlaedi kngnldtdft iqnendilgr tlvemranlk
      181 qiitetnqvv qsageqgdfs arveiedksg vwltlsqsln ellesvsrpf fsinkivsam
      241 angdltlrye eqeegdikkm tdnlnlaldn ldsllntiar nvniiddsas emqitgeems
      301 nntneiasai gqmshgaqsq lakvdessal vegiltaskg mvskaedins takrgadlsk
      361 sgitiveemv nsmreistfs nktkdsmgvl terskeitrv lgviseiasq tnllalnaai
      421 eaaqagdagr gfavvaeeir klaedskksa keieelvkgv qvdtretaev itqmsemvke
      481 gentsvqass sfreifdssn ktlhsseeil qaansqiesi nnvvtitesi vviaeetaag
      541 teqvassate lssgmvnfgd rstylaqvae efregismvk lsgntsensa lynmrekfeq
      601 ekalldails nlpdliyfkd lesrftrisd sliklhnkqs adailgksdf dlfgehakka
      661 lkdeqeiikt gkpllnliek edridgtvay vsttklplkd vngqiigtfg itrditelke
      721 aelkssqrad qlqrqeeiik nnanvvkrqn elfvdiinql eekievkspe gklylindva
      781 assygtdvsq vigkdnfdff dhetaskywn tekqlilnnq savslekvil kgkptywfir
      841 kqpiyipefd glgllgiqre vesyqieekg laedlkvkyp eisvel
//
LOCUS       WP_258101868             211 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6134 family protein [Marinoscillum pacificum].
ACCESSION   WP_258101868
VERSION     WP_258101868.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040005.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19630.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..211
                     /product="DUF6134 family protein"
                     /calculated_mol_wt=24050
     Region          25..193
                     /region_name="DUF6134"
                     /note="Domain of unknown function (DUF6134); pfam19630"
                     /db_xref="CDD:466133"
ORIGIN      
        1 mkliltttgf llfvfssita qrleydvirs desmgttvvn rtntngkvty llntktefrv
       61 ifkfeveyel eetflngtlq sgrsfntlng ntqketelai kqgfysliid gihtqvdeke
      121 irnsvselyf eepydgkevf sayfgrmltf dkigehlykl vspdgtneyl yengicvnvk
      181 vsrdfatfnq vlkpellaav rnnkyansis k
//
LOCUS       WP_258101886             220 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Marinoscillum pacificum].
ACCESSION   WP_258101886
VERSION     WP_258101886.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 220)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..220
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=24786
     Region          17..215
                     /region_name="PRK15369"
                     /note="two component system response regulator"
                     /db_xref="CDD:185267"
ORIGIN      
        1 mnllsflrkn svnnqmrifl tddhavligg lqkiietehd levvgtagdv qstmdaltht
       61 kvdllitdyn lpdedgltlv rkvkrkypal kilvlsmhde ahlvkeilke gvdgylikkd
      121 shkelinaiy sikggktyls sdvnsilikg lngegeqkll tdrereilkl iskeftnkqi
      181 aeelfisert vethrknifr ktgtnnlvgl ikyayannli
//
LOCUS       WP_258101981             572 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Marinoscillum
            pacificum].
ACCESSION   WP_258101981
VERSION     WP_258101981.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025846.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14493.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..572
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=64397
     Region          <2..386
                     /region_name="RecD"
                     /note="ATPase/5#-3# helicase helicase subunit RecD of the
                     DNA repair enzyme RecBCD (exonuclease V) [Replication,
                     recombination and repair]; COG0507"
                     /db_xref="CDD:440273"
     Region          2..178
                     /region_name="DEXSc_Pif1_like"
                     /note="DEAD-box helicase domain of Pif1; cd18037"
                     /db_xref="CDD:350795"
     Site            order(3,21..28,101,141)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350795"
     Region          467..568
                     /region_name="HTH_40"
                     /note="Helix-turn-helix domain; pfam14493"
                     /db_xref="CDD:464189"
ORIGIN      
        1 mdqetalsil kagqniyltg sagtgktyll nqyieylrqr evpvaitast giaathiggq
       61 tihswsgigi rehigpkele qignnrqtvs rirnthvlii devsmlsgkv lmginaimkh
      121 frnsqeafgg aqvifsgdfy qlppvskeam snrekfafma pvwveaklki cyltqqfrqg
      181 rdtlsfilse irsqdvsdds lerireklee dekhddaikl ythnadvdqm nskklkenty
      241 plrtfyaetk gktnileglk ssvlaspale lkkearvmfv knnpekgffn gslgtvvsfd
      301 dnenfpivel degkkviakp eewtvtdeke tilasykqip lrlawaitvh ksqgmtldaa
      361 emdlsktfea gqgyvalsrl ksweglnltg inrvslmldp lavkadkrfq elseesedwi
      421 nihqgkdltn lfekfivrcg gtndpviieg nkeriqeyye kpkkastyqk tlemvkagkg
      481 ldeiafdrdl glgtivnhle elkkqdpdld lskyepdrks lekvskviar lkaqaneefy
      541 dkdgniklgf ihgalngqvd yetirlarlf ad
//
LOCUS       WP_258101748             143 aa            linear   BCT 02-MAR-2025
DEFINITION  sporulation protein [Marinoscillum pacificum].
ACCESSION   WP_258101748
VERSION     WP_258101748.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 143)
  AUTHORS   Han,W.D., Kawamoto,S., Hosoya,Y., Fujita,M., Sadaie,Y., Suzuki,K.,
            Ohashi,Y., Kawamura,F. and Ochi,K.
  TITLE     A novel sporulation-control gene (spo0M) of Bacillus subtilis with
            a sigmaH-regulated promoter
  JOURNAL   Gene 217 (1-2), 31-40 (1998)
   PUBMED   9795118
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07070.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..143
                     /product="sporulation protein"
                     /calculated_mol_wt=15945
     Region          <38..131
                     /region_name="Arrestin_N"
                     /note="Arrestin (or S-antigen), N-terminal domain;
                     cl22903"
                     /db_xref="CDD:451447"
ORIGIN      
        1 mglfknvanf vtggaaevql elinpvldne ysmhvvirvk ptgdtihakr lylevqvvee
       61 sstknvlfrq ehilsedlqi nqgdekewsf tvelpaevpp tylakyfsvk wgikasldmp
      121 gvdpnsgwqp fvlnkevgvs elm
//
LOCUS       WP_258102122             390 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Marinoscillum pacificum].
ACCESSION   WP_258102122
VERSION     WP_258102122.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 390)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..390
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=44438
     Region          121..352
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Site            order(125,127,161,196..197,254,334)
                     /site_type="active"
                     /db_xref="CDD:277368"
     Site            order(125,127,161,196,254,334)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277368"
ORIGIN      
        1 mkkrvlryll higvtaliic igfvitvilq gaafkygdhp arknlnqegp yvfylndsia
       61 tvhyiygdke kgfkdqvety stddgitasc ffpldssqfq ftinhqitip ptyyednepi
      121 laisdieggy qtfrdflian kvidkhlnwt fgkghlvlvg dfvdrgwsvt qvlwfiykme
      181 qdakeqgghv hfiignhelk nlqgmygyta dryfaaaaim gklhhhlydt nsfigrwlss
      241 knvaeringy lfvhgglhpd lgnsnitleq insiyrknyy qvyyrqpneg aerlilsdqk
      301 gicwyrgyfn edlsqadvdk plekfgakav vvghtlqkev ttlyngrvia idikhpkdyr
      361 niwpsvnsqg livkngqtyr ahadgsteil
//
LOCUS       WP_258102151             777 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Marinoscillum pacificum].
ACCESSION   WP_258102151
VERSION     WP_258102151.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 777)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..777
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=88386
     Region          218..397
                     /region_name="7TMR-DISM_7TM"
                     /note="7TM diverse intracellular signalling; pfam07695"
                     /db_xref="CDD:429600"
     Region          <399..777
                     /region_name="PRK11107"
                     /note="hybrid sensory histidine kinase BarA; Provisional"
                     /db_xref="CDD:236848"
ORIGIN      
        1 miqrltlilc ivlaqssltm aqvengwldl rditdfdepv ylsgewrfyw gdllsplemd
       61 tvresdyfyf petwtnqysr dgielnrfgs atyqmqvvlp ddypelalyi khvysagdly
      121 vnddlvefgg epgtsksttk pkwvpkiiel prgidtlklt lhianyshdk ggarepivlq
      181 seemldsrys elmaydllla galimtglff aglfffgsre ipalsfalfc ltfsyrviga
      241 ddytlqiiyp empwwlslkl eylslflppm flsfythqlf tfnykvnpff vfsaisgvfa
      301 vitiffppii ytqfvefylg lilvgilvag ftyfkayrrk lngskwamls sfvvfvifgy
      361 eifvylgali qiefitfigy taffffqsii lfllfadslr rakeeaeraa ktkseflsmm
      421 sheirtpmna vigltnylld dqpkeshket lstlkfsaen llviindild fskieaqkie
      481 ldfqvmsirq lvrkmqqife piakakslam rinvedsipd qlecdqtrls qvltnligna
      541 ikftekgsvt lelkkewlgk naasirfsvk dtgigidksr qnaifesftq anssitrefg
      601 gtglgltitk rllalqgsel yleseqgkgs nfwfvlnlrt geekpvsnsg lnntvnespi
      661 agkillvedn evnvmvatkf lvkwgaevqv akngqeavdr lrtekyavil mdlqmpvmdg
      721 ftaarkirem gvnipiialt asvlledrdk iyeagmddfv mkpfdpmqlq nkilhys
//
LOCUS       WP_258102169            1150 aa            linear   BCT 02-MAR-2025
DEFINITION  M43 family zinc metalloprotease [Marinoscillum pacificum].
ACCESSION   WP_258102169
VERSION     WP_258102169.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 1150)
  AUTHORS   Chen,B.K., Overgaard,M.T., Bale,L.K., Resch,Z.T., Christiansen,M.,
            Oxvig,C. and Conover,C.A.
  TITLE     Molecular regulation of the IGF-binding protein-4 protease system
            in human fibroblasts: identification of a novel inducible inhibitor
  JOURNAL   Endocrinology 143 (4), 1199-1205 (2002)
   PUBMED   11897673
REFERENCE   2  (residues 1 to 1150)
  AUTHORS   Mazerbourg,S., Overgaard,M.T., Oxvig,C., Christiansen,M.,
            Conover,C.A., Laurendeau,I., Vidaud,M., Tosser-Klopp,G., Zapf,J.
            and Monget,P.
  TITLE     Pregnancy-associated plasma protein-A (PAPP-A) in ovine, bovine,
            porcine, and equine ovarian follicles: involvement in IGF binding
            protein-4 proteolytic degradation and mRNA expression during
            follicular development
  JOURNAL   Endocrinology 142 (12), 5243-5253 (2001)
   PUBMED   11713222
REFERENCE   3  (residues 1 to 1150)
  AUTHORS   Chelius,D., Conover,C.A., Baldwin,M.A. and Spencer,E.M.
  TITLE     Characterization of the enzymatic specificity of the IGF-dependent
            insulin-like growth factor binding protein-4 (IGFBP-4) protease
  JOURNAL   Growth Horm IGF Res 10 (6), 360-366 (2000)
   PUBMED   11161967
REFERENCE   4  (residues 1 to 1150)
  AUTHORS   Overgaard,M.T., Haaning,J., Boldt,H.B., Olsen,I.M., Laursen,L.S.,
            Christiansen,M., Gleich,G.J., Sottrup-Jensen,L., Conover,C.A. and
            Oxvig,C.
  TITLE     Expression of recombinant human pregnancy-associated plasma
            protein-A and identification of the proform of eosinophil major
            basic protein as its physiological inhibitor
  JOURNAL   J Biol Chem 275 (40), 31128-31133 (2000)
   PUBMED   10913121
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017393.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05572.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..1150
                     /product="M43 family zinc metalloprotease"
                     /calculated_mol_wt=130054
     Region          79..323
                     /region_name="ZnMc_pappalysin_like"
                     /note="Zinc-dependent metalloprotease, pappalysin_like
                     subfamily. The pregnancy-associated plasma protein A
                     (PAPP-A or pappalysin-1) cleaves insulin-like growth
                     factor-binding proteins 4 and 5, thereby promoting cell
                     growth by releasing bound growth factor; cd04275"
                     /db_xref="CDD:239802"
     Site            order(247..248,251,257)
                     /site_type="active"
                     /db_xref="CDD:239802"
     Region          980..1065
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          1079..1150
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mrnrlynlhf lfllftflwi ptrgqhttkp telcgtvpyi dslqriyhys fqetrfeqql
       61 khyitnsssr kiseeeevyr ipvivhvihs gepegqgsni sfkqvvsqie vlnddfrrrg
      121 ygynenpdga dtkiefflae rgpdgillse pgvdrvrfnt qwtrksleeq lkpqtywnps
      181 kylniwvvdf pdwlgfsgya qfpvnsgleg inealpeysd gvliktqyfg tngtatapyn
      241 mgrvathevg hwlglrhiwg dgdcskddyc edtppaespn reclenvsce trdmienymd
      301 ytpdacknif tldqkarmra vlevspmrrn lvrvvsdcqs alvidegehs tqslpqyysy
      361 taqkdeviai sslgltssdt ylelysscsg evlksnddir ndkqslvtys mmkdeevlik
      421 wesldnemnf gwqlktsdhf igatsdlpvl aidgdnvlpv dsgwiwyqyp vitenmklqi
      481 daedasidvf vnscfggvas fvgagsvsad glvagdtcyi lltgkmpevm rmemlpmeag
      541 escmspatsv lganafegae hwssfttpya gdfvilhqnd dnqesinlqv yrncdelvgs
      601 snigvyrlgn vgadetylik wedlgdrsgf ewmiqshedl agenchltfn aveghntyev
      661 tqdyfelwfr yitpdyraml tfdfgenssl qnfdlykgdd cnnldyiysi spypwndspl
      721 fepndtiymv wevdenmlld wtihvmpeav gdacdnahvs ieginqtpgd ymncwsrftm
      781 prsgkltvts vgltdqdtel eiftncadpv qlasnddseg tqqstvilda vnageslilh
      841 wknenanlpi qwnisvednd lpgalcvnai evdmssepld gkaenwyrvv mpeqgnmlis
      901 snnltdvdty lrvydgcgla lvgesddvdw yamnfqsell ieelnagdel lifwsgkwse
      961 epfqwqlswk eplpevtdqt felsehtipg tqigqievak adladlsfsi lgegsypfrl
     1021 daatgelflt eavdyetqne ytlsveiikg ewsaeivltl llvdeielst glskldisvf
     1081 pnpvqeelfi ekhtgedlma fvfdvsgemq lsfklttnqh rvrvdqlkag vyilqlnsad
     1141 ksyqtkfirr
//
LOCUS       WP_258102187             972 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Marinoscillum pacificum].
ACCESSION   WP_258102187
VERSION     WP_258102187.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024816.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13424.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..972
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..972
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=112161
     Region          53..217
                     /region_name="TadD"
                     /note="Flp pilus assembly protein TadD, contains TPR
                     repeats [Intracellular trafficking, secretion, and
                     vesicular transport, Extracellular structures]; COG5010"
                     /db_xref="CDD:444034"
     Region          149..180
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          179..449
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          186..214
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(187,190..191,194..195,197,221,232..233,236..237,
                     239..240,269,272..273,276..277,280)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          219..257
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          268..296
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          307..337
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          342..372
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          458..694
                     /region_name="KdpD"
                     /note="K+-sensing histidine kinase KdpD [Signal
                     transduction mechanisms]; COG2205"
                     /db_xref="CDD:441807"
     Region          738..>848
                     /region_name="PleD"
                     /note="Two-component response regulator, PleD family,
                     consists of two REC domains and a diguanylate cyclase
                     (GGDEF) domain [Signal transduction mechanisms,
                     Transcription]; COG3706"
                     /db_xref="CDD:442920"
     Region          887..>955
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
ORIGIN      
        1 mksvacrsil rsifcafffc fvlfsqsqsk eqldsirhya dtsssydisv knylklahyy
       61 akrqradsid kyaeladsll qfiphrdqyd ykiysnklwa nwirgnyvea tdwailldpe
      121 lekintqias geypivenip dtiylnehwn alsdlyrkig dfeksyayvi ksleyaqsis
      181 yeygiadsyn nlgilydlqd qpeeaivhyn kaieinkrlg knrrwqlgtn ynnlgiifkn
      241 ketfdssqlm yeaalsimve mkqdygrgvv ldnlgtmfnk kgdydeaviy hqqalelmre
      301 lgsrdqesei sinlsdnyln lgeldkaqel aeaafqiakt deqwenvrtg skmlsqiyea
      361 kgntakalef yktfhdeyer fqneetsdav enlrikyetq qkinenellk tqvtvsesri
      421 erqqlyiviv avvlvfvlvi lfilykvyqh skrqrrviee qanklqeldq yksrffanis
      481 hdlrtpltli ggrlnqlked ssnilsvqsq syleslieyn khlqvlvddm kelmviesgk
      541 inlnfeckpv lsyvkstvyl fqsyadlkni nllfeqtfdd drvihldsnq inkviynlls
      601 nafkftdtgg tvsvfldane ngielkvsdt gigiekshld kifnryyqad nqyfqreglg
      661 iglslvkeiv elhsgvvtve seihkgttft vflpynldkd veavvpssvk efslanlqpq
      721 ehvvqkfstn pttgnevvli vddhddvrgy ihevlqehfn vleatngeea lkvlgqrkvd
      781 vvvtdlmmpf mdgfglldam nddprftklp ilvvsarvgl eerrevlnkg vndflskpfd
      841 keemilrvrn llngaqqtgq qvhaesdlre tvldkldhyl iknidrqisv eelanellts
      901 nrnlyrmikt ltgmtpleyq ndlkykfaye mlssqqvssl keasmaigvk nvtyfkkqme
      961 srfgnnfvkf ls
//
LOCUS       WP_258102221            2380 aa            linear   BCT 02-MAR-2025
DEFINITION  BspA family leucine-rich repeat surface protein [Marinoscillum
            pacificum].
ACCESSION   WP_258102221
VERSION     WP_258102221.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015347.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03382.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2380
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..2380
                     /product="BspA family leucine-rich repeat surface protein"
                     /calculated_mol_wt=254540
     Region          142..>226
                     /region_name="DUF285"
                     /note="Mycoplasma protein of unknown function, DUF285;
                     pfam03382"
                     /db_xref="CDD:427272"
     Region          <321..>378
                     /region_name="DUF5018"
                     /note="Domain of unknown function (DUF5018); pfam16410"
                     /db_xref="CDD:435323"
     Region          519..638
                     /region_name="DUF285"
                     /note="Mycoplasma protein of unknown function, DUF285;
                     pfam03382"
                     /db_xref="CDD:427272"
     Region          594..712
                     /region_name="DUF285"
                     /note="Mycoplasma protein of unknown function, DUF285;
                     pfam03382"
                     /db_xref="CDD:427272"
     Region          <766..931
                     /region_name="DUF5018"
                     /note="Domain of unknown function (DUF5018); pfam16410"
                     /db_xref="CDD:435323"
     Region          1139..1231
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(1144..1145,1196,1198,1229,1230..1231)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          1239..1330
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(1244..1245,1293,1295,1327,1329..1330)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          1347..1429
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          1441..1533
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(1446..1447,1497,1499,1530,1532..1533)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          1555..1628
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          1639..1733
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(1643..1644,1697,1699,1730,1732..1733)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          1748..1836
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(1748..1749,1800,1802,1833,1835..1836)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          1824..1913
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
     Region          1896..2190
                     /region_name="DUF5018"
                     /note="Domain of unknown function (DUF5018); pfam16410"
                     /db_xref="CDD:435323"
     Region          <2207..>2284
                     /region_name="DUF5018"
                     /note="Domain of unknown function (DUF5018); pfam16410"
                     /db_xref="CDD:435323"
     Region          2310..2377
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mkkllltaig lfglyglfaq snpfitqwnv andldtiqig lnsgqsydfs yvwknnadst
       61 vssgthasad gdfktgfaka gtytleitgs fphftnypkg rlldvqqwgd ivwksfnqtf
      121 anwsgttfsa tdapilseeg vsffrifrqs gsfagdlshw dvshvtqfne sfqsarsfns
      181 dlstwdltgv dnfgnsfnga ikfeghglse wditnatrfa gtfnntaiat atydsilisw
      241 snqnanrgvs fnigntqacs tegevarekl irdfnwsisd ggtcdeasni lsfqfpeiqi
      301 gdefidytnh ivelevfpgi dissvvpvfk lsegatstpd gevsqdftns vtytvtaedg
      361 ittqdwtvnv sftdqlpfis swsatagesi tiglnnqlsy dfnylwkden gnlivfgnhs
      421 isdgnftstl petgiytlei fddfphlten ypkdqlldvl qwgdiewksf vksfknwpgs
      481 dfsatdvpdl sqvtemfelf yqaenfngni gswdvsnvtn mnsvfreaiv fngdvsewdv
      541 vkvedmsrmf enansfngdl sdwqvseltn mskmfkdasn fnsdisgwnv snvtnmlelf
      601 sgassfnqdl nnwnvsqvtn festfrnata fngdisnwqv negtnmsfmf sgaenfdqdv
      661 sgwqtgkaqd mrdmfasaka fnqdvsqwsv gavtnmtnml sgsglspqny dklliawsaq
      721 evldnvslgv nditfckgev arqsliddhg wiieddgqfc ldetdildfk ilgfnktavi
      781 daanhtleiv lpqntdvsil qpvmtlspga tsspaneevv dftnpvsiti taedgtttqe
      841 wvvtvhvvps ndfcsgaiti tigetvtgnt tfatndsnva sscgsnevrn dedgenggis
      901 vgvwyrlign getvilstcd fadfdtgisv ytgscsagln clsgnddgee cedfrsklkf
      961 nsvvdeeyli lvdgygsasg efdltitsqp tipppdndnc sdaeeltvfa egagtptngt
     1021 nshattftkp qlcdqygtin dvwyrfnsga nvevsvtval tdtdsdgple vaefiridgy
     1081 etcggesldl cenqgtfsme vqpntdyllq lwndevsegt ftilvndgpn taaivedaev
     1141 aisrfstsgs lvvtvesnde egheqrysie agneesifai nevtgeisvi neaallasat
     1201 tsfeltiqaa dqgpgtltst gtvtiniidn dfpeianqsa svdenasngt vvmqviasdd
     1261 dgiefsiaeg qgevpfviss sgeitvsdet alnfeeqsvf efvvkvqddd allplastat
     1321 ititlndvne apvltslpdf gisgflpngs lirtisfqdq dagqthsfai tagnddgifg
     1381 invgtgsitv vnsdaleale ngsaitltvt vtddgvpplt gqtevlmsvf knaapaivtt
     1441 sftidenlad gtevgtvlat daegdaisfs liggnslgaf lidedgvitv adeemlnfev
     1501 npsfeliiea sddsegslat teaititlqd vneaptaddl slnmsafvqn ghvwgtvvas
     1561 dpendvlsys ivsgnedgvf aidantgvgt vldasqinve ntpsydleia vsdgelsaii
     1621 saeisvfvnr fpaliasdfd idenssigtv iatlssddad giesyeiisa seegilslns
     1681 ktgvitlvgs gsafeldyet lqeivlevkl tdlgigqlea tetvtisvnd ineytpvide
     1741 vqvnalnenv asgtvvasvi asdedifqsl sytitggntg daftisnsgi itvnssatld
     1801 fevnpsfvlt vevsddveti rtvtqqvnia ltdvneapvl tafeaqigkv geelsitava
     1861 sdvdlpantl vysidtdsqn kgitidpasg vlvwtptvdq vgdhtvvvsv sdgefsdees
     1921 vsitihsiat eiltfvldaq tgdatidsvs heillevarg tdltalspef tlsagatsdp
     1981 vsgstidfse saiitvtaqd aettqawtvs vtealnsand iltfelaeqv epatidienh
     2041 tislvvndsa ditalapvlt lsedatsdpa sgtvqdfsgn vtytvtaeng daqewtvsvd
     2101 qevalssekd iltfevaeqv stpnidatnh tvevivaegt dltslvpvft isegatsdpg
     2161 sgevvdftis edssvvytlt aedgttrawr vlvevevltv pktsttilsf tlpeqvsdae
     2221 idtenhtvav vvafgtnvta ltpsftlsdg atsdpasgeg idftspvvit vtaedevtvq
     2281 ewtvtvevee edsepdpgll sadkgmnlki ypnpvasqly inakttvsar lldvegktir
     2341 esktgtdisf dvadlsagiy lliiesgnev kthrilkvrs
//
LOCUS       WP_258102256            1622 aa            linear   BCT 02-MAR-2025
DEFINITION  FG-GAP-like repeat-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258102256
VERSION     WP_258102256.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13517.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1622
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..1622
                     /product="FG-GAP-like repeat-containing protein"
                     /calculated_mol_wt=176154
     Region          190..258
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          247..307
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          296..357
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          346..412
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          402..472
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          708..771
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          <1099..>1181
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          1104..1123
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1124..1147
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1148..1170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <1462..1503
                     /region_name="CarboxypepD_reg"
                     /note="Carboxypeptidase regulatory-like domain; pfam13620"
                     /db_xref="CDD:433354"
     Region          1542..1620
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     cl46851"
                     /db_xref="CDD:481191"
ORIGIN      
        1 mkpelqniik erqhstyqkl rgrflksmks gtfqeksskr khrlveklkh leeqlgfkst
       61 pklkhwamav algfvtvian gqdtdtskkt gilgrrevra kstplsnvpk vsnvaeialf
      121 esqdffgdpl medgvylhgd mdgdgdedlv vfnysgtldm lqndgagnfd nrivisnvss
      181 nyldntlitd idadgdldll alnssydsyg tptleihtyl ndgtgllsst sqtiadigan
      241 ndfeivding dgnsdiitgs yspqngssvi tlindgtgsf slgssigsst efilgdfdgd
      301 sdldivvsdy fvrvytndgs ggfapanyil ndaisnayfe qgdagdldgn gtddivlsyy
      361 nsgvvvlynt egtgifdipd tliqnnvttd farraylehl ididkdgdld ivykeeyrny
      421 llfeesdsft alyndgigtf tpsqlpittn ggsidalsif dvdgdsdldl iasnyfdivv
      481 ykntaqtftl frddfttvfy glrnkfvdid ndddldviis gtpavfendg kgnltikqdl
      541 frdfnaplgy alvvgdfdsd gdidmmlgdi dgfqsnltlw tndgtgtfte gtpisltgev
      601 fqtevadldg dgdldivtis eylegtyylm thfneggvft tnqtqfinqe iknelqlvdi
      661 dgdgdmdiis ggsngvviit ndagtlastp ttyldgigge fdkliigdid adsdldiial
      721 nsyisggaph ylltndglgv fssevlpfsp tayyggkiad fdldgdvdil ilggeeyede
      781 fwandgagaf tlagtlgtss ydadygdidg dgdldiialq yyagshliln ttnepvlipt
      841 iagsilynda pvtdgqvvly qmsvgpfvpv dtvaivdgaf sfedvadgay iletkadptl
      901 ypdalptygs tgepswtlad tiffaesldp ttiiistfvp psvedgalls asvsntisad
      961 lneaiplvis rsdtengtyi pydyketdas gnidfgaigt gfysaelayp glispelvfe
     1021 vadanlldey vldatisfts ieitttiitp sntitkgdst alvrlynnlg gpewanadtn
     1081 gwlsttadsw agvtidadkr vskldlaenn lvgkfpalee ldqldtliin nndlgtnaid
     1141 slgfnfsliy ldassnnldt ipnfglfelm tyldvsnnnl tfeelvpnaa ianytyteqa
     1201 iigqaksdtl aagssieisv pdlgvgtvyq wkfgklipgq nintdvvela gqvnrnllie
     1261 ninfdnqgty iltathpsvp eltlisepln vwaktnlfga ittagnpltd gdviilrltp
     1321 sgpfvaedtv elsttgtyef sdvilgdfli nvkpnrevfe ntiqtyyike qdyedadtlk
     1381 lrqettgvni emivftpptt tpppsqaksi tgivetnfqe dgtdnngnri darrkvkraa
     1441 csvrrfvpkg rttqegdfvl yayvesndng efqftnleag tyrlrieypg vpmdedsdve
     1501 fvlegsnvtg ysvlatvted gifvesspvl gtpspflnei kvypnpvket aqlrytvnrk
     1561 isslnfklls idgkiisngs lgtktgtydl klntenldpg iyfvnlydte rnfsyqvkli
     1621 ke
//
LOCUS       WP_258102319             574 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Marinoscillum pacificum].
ACCESSION   WP_258102319
VERSION     WP_258102319.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024816.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13424.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..574
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=65204
     Region          77..379
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Site            order(120,123..124,127..128,130,159,162..163,166..167,
                     169..170,197,200..201,204..205,208)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          120..147
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          157..187
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          192..222
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          234..257
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <486..569
                     /region_name="LytT"
                     /note="DNA-binding response regulator, LytR/AlgR family
                     [Transcription, Signal transduction mechanisms]; COG3279"
                     /db_xref="CDD:442510"
ORIGIN      
        1 mklfiylmli acsslimaqr pdfeslkqai skaetdeakl rafnqygdal pndrhaevls
       61 iadsleivaq tandpkllia ssnflhgvgy fkareyaksk pylqkaanly hemndeiefr
      121 alnvlglsyi rlrevdssiy lynkiletlp ntniqgkist hgnlgssyrq sgnyakaleh
      181 leaayrldsm naftqintam niahiyneme mydqaistlk kvainnappi ppkavyynnl
      241 aisyskngql dsafqyftag rkiaqdvkyp sgeftaisnl vecnleleqf dkipellsdl
      301 knlipvrpmd gdfrfhflng qyllktekyn daidalllge tatnkpplsn mkpaiyhali
      361 daytaldslk lakeyinkld rerespansk rerflaeaka nyllavteae lddknkevve
      421 ssnkviifgg aaallmivaf ilfrinqksn etlvsqeqek adlqkeiekq rtqiielksk
      481 aileaqeivs iksdghylef slknkpkpev drnklkdile vlpdffiqih rsyiinikev
      541 rvkfadkvem kngeelpvsr kfkeefneai kkfe
//
LOCUS       WP_258102430             250 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Leuconostoc mesenteroides].
ACCESSION   WP_258102430
VERSION     WP_258102430.1
KEYWORDS    RefSeq.
SOURCE      Leuconostoc mesenteroides
  ORGANISM  Leuconostoc mesenteroides
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Leuconostoc.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Leuconostoc mesenteroides"
                     /db_xref="taxon:1245"
     Protein         1..250
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=27883
     Region          1..>118
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
ORIGIN      
        1 msvvlikkyk ikslfisail flvlgtllga favsfemlia arafqgigtg ialplmyhii
       61 ltqspksklp iimglggmat siapafgpay ggfmlqtfgw ryifvgllpi icfsliigic
      121 sieshgiekk sdikmplntl fylivaivsl flflshfkiv fvvisiiawi lfgitnkvhk
      181 lieliilkqr kyalllisll tyqmlllsva fiipnfiqik mgminagwyv ydprglcwch
      241 sctnfwkfte
//
LOCUS       WP_258102443             382 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Leuconostoc mesenteroides].
ACCESSION   WP_258102443
VERSION     WP_258102443.1
KEYWORDS    RefSeq.
SOURCE      Leuconostoc mesenteroides
  ORGANISM  Leuconostoc mesenteroides
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Leuconostoc.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Leuconostoc mesenteroides"
                     /db_xref="taxon:1245"
     Protein         1..382
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=43652
     Region          5..361
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 maqfnhrnie ilqnlnyevh vaanfthygt lsgksnqkfi dwlykkgvav hdvslrrgfg
       61 klldnvnall einklmkqeh fsfihvhtpi asvlgrvial knkvpvvyta hgfhfsktsn
      121 kinwlifpie wmlsfftkql ivinqedygf akrhlhakyi nyqagvginf nllksvtise
      181 hieakktlle kfdipenari ivsvgelttr knhrvvieai kklgrsdvhy viagkgylls
      241 ylknlaield lesqvhfmny ttairrlnla advavlpslr eglsragles irdgvyllga
      301 dirgikdyiv ndqvgrtfnp ydseelttll vktidmkrtk lnqesvdklm ifdrknidkq
      361 mrdvykkmgt gndnrlrntv gr
//
LOCUS       WP_258102485             343 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Vibrio campbellii].
ACCESSION   WP_258102485
VERSION     WP_258102485.1
KEYWORDS    RefSeq.
SOURCE      Vibrio campbellii
  ORGANISM  Vibrio campbellii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024573.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13175.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Vibrio campbellii"
                     /db_xref="taxon:680"
     Protein         1..343
                     /product="AAA family ATPase"
                     /calculated_mol_wt=38807
     Region          96..343
                     /region_name="COG4938"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443965"
ORIGIN      
        1 megtnfqity rfdcvqfkie gkknkrgktt lsltyddgfn kyvkhckkty qkalcelrnd
       61 ksgkaainre rhlfyervme ghgehvysdv fkdgafvpas rsffanlqkn iftflasnld
      121 idpylkefgs lyeaskrwyn msfitkskly selasgltsv vggdysyhde qdwilakngr
      181 vnlanassgq qealpmllvl stwplmralg stsndgrrkl fieepeahlf ptsqssvvsl
      241 lsslyaktet dlfitthspy ilsalnnlil agdkidegki teerfselnh sgspikyedi
      301 sayticngel kvitddefrm igaemldevs ghfenvmnel lel
//
LOCUS       WP_258102552              94 aa            linear   BCT 02-MAR-2025
DEFINITION  YciI family protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258102552
VERSION     WP_258102552.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 94)
  AUTHORS   Yeats,C., Bentley,S. and Bateman,A.
  TITLE     New knowledge from old: in silico discovery of novel protein
            domains in Streptomyces coelicolor
  JOURNAL   BMC Microbiol 3, 3 (2003)
   PUBMED   12625841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015735.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03795.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..94
                     /product="YciI family protein"
                     /calculated_mol_wt=10430
     Region          1..86
                     /region_name="YCII"
                     /note="YCII-related domain; cl00999"
                     /db_xref="CDD:445220"
ORIGIN      
        1 msylvigrdg hdaaerrqaq rqahldsvak lksegkilya vamleegkmv gsvmvfdfes
       61 veelevwkan epyitgnvwe tvevmecavp pafk
//
LOCUS       WP_258101884             604 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat-containing sensor histidine kinase
            [Marinoscillum pacificum].
ACCESSION   WP_258101884
VERSION     WP_258101884.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 604)
  AUTHORS   Perez-Riba,A. and Itzhaki,L.S.
  TITLE     The tetratricopeptide-repeat motif is a versatile platform that
            enables diverse modes of molecular recognition
  JOURNAL   Curr Opin Struct Biol 54, 43-49 (2019)
   PUBMED   30708253
REFERENCE   2  (residues 1 to 604)
  AUTHORS   Ortet,P., Whitworth,D.E., Santaella,C., Achouak,W. and Barakat,M.
  TITLE     P2CS: updates of the prokaryotic two-component systems database
  JOURNAL   Nucleic Acids Res 43 (Database issue), D536-D541 (2015)
   PUBMED   25324303
REFERENCE   3  (residues 1 to 604)
  AUTHORS   Zeytuni,N. and Zarivach,R.
  TITLE     Structural and functional discussion of the tetra-trico-peptide
            repeat, a protein interaction module
  JOURNAL   Structure 20 (3), 397-405 (2012)
   PUBMED   22404999
REFERENCE   4  (residues 1 to 604)
  AUTHORS   Allan,R.K. and Ratajczak,T.
  TITLE     Versatile TPR domains accommodate different modes of target protein
            recognition and function
  JOURNAL   Cell Stress Chaperones 16 (4), 353-367 (2011)
   PUBMED   21153002
REFERENCE   5  (residues 1 to 604)
  AUTHORS   Dutta,R. and Inouye,M.
  TITLE     GHKL, an emergent ATPase/kinase superfamily
  JOURNAL   Trends Biochem Sci 25 (1), 24-28 (2000)
   PUBMED   10637609
REFERENCE   6  (residues 1 to 604)
  AUTHORS   Stock,A.M., Robinson,V.L. and Goudreau,P.N.
  TITLE     Two-component signal transduction
  JOURNAL   Annu Rev Biochem 69, 183-215 (2000)
   PUBMED   10966457
REFERENCE   7  (residues 1 to 604)
  AUTHORS   Blatch,G.L. and Lassle,M.
  TITLE     The tetratricopeptide repeat: a structural motif mediating
            protein-protein interactions
  JOURNAL   Bioessays 21 (11), 932-939 (1999)
   PUBMED   10517866
REFERENCE   8  (residues 1 to 604)
  AUTHORS   Stock,J.
  TITLE     Signal transduction: Gyrating protein kinases
  JOURNAL   Curr Biol 9 (10), R364-R367 (1999)
   PUBMED   10339418
REFERENCE   9  (residues 1 to 604)
  AUTHORS   Alex,L.A. and Simon,M.I.
  TITLE     Protein histidine kinases and signal transduction in prokaryotes
            and eukaryotes
  JOURNAL   Trends Genet 10 (4), 133-138 (1994)
   PUBMED   8029829
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 18641222
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..604
                     /product="tetratricopeptide repeat-containing sensor
                     histidine kinase"
                     /EC_number="2.7.13.3"
                     /GO_function="GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=68623
     Region          44..340
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          67..103
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          114..140
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          154..177
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          194..219
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          371..579
                     /region_name="ComP"
                     /note="Signal transduction histidine kinase ComP [Signal
                     transduction mechanisms]; COG4585"
                     /db_xref="CDD:443642"
ORIGIN      
        1 mkhlltlvfv mtltacqfqd qpsldysnqd eailvdslna nfyqiysadf naakeamksa
       61 idistinqwp dkkaesyknm avieyltgny eqalslalqa relydsiqdw sgvaktdnel
      121 gnfyrktgrd dkalemwnea eklslkvndl ttlgtaygmk gtfywlkeqy eisdeyyfks
      181 ydirvqeqds vglgyilvdl adieqrkgnl ngaisyfeqs nsirekigdw qgvvdnnkmi
      241 gdmwmkeknw ksaivyyqkc aeqsqelgyp dlrrksldsl ssangylgqf kealelklla
      301 idlkdslfsa ektmriaklq tqyetakkeq iiaeqqltiq qnqlllgglg fgllfllisg
      361 yqlsqkqklk hqkaletekr makeaqieas issqekersr fakdlhdgfg qlisilnlnl
      421 ksleqgdkdk hevfessskv leemyqelkg icfnlmpqtl ilhgitsaln efaarinttd
      481 klyvetdffg lderltdvqe islyritqew inniikysda skvtiqitkd qeeltllied
      541 ngngfninsl tsgkgngwkn mnsranling elevdstpgi hgntlivnav itqsvvkdyn
      601 tinn
//
LOCUS       WP_258102568              97 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidylprolyl isomerase [Vibrio campbellii].
ACCESSION   WP_258102568
VERSION     WP_258102568.1
KEYWORDS    RefSeq.
SOURCE      Vibrio campbellii
  ORGANISM  Vibrio campbellii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025002.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13616.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Vibrio campbellii"
                     /db_xref="taxon:680"
     Protein         1..97
                     /product="peptidylprolyl isomerase"
                     /EC_number="5.2.1.8"
                     /calculated_mol_wt=11020
     Region          6..96
                     /region_name="Rotamase_2"
                     /note="PPIC-type PPIASE domain; cl29122"
                     /db_xref="CDD:452928"
ORIGIN      
        1 mrdrhmanta halhilvkhk eqaedimkql kqgkkfadla rkhstcpsgk kggdlgefrk
       61 gqmvpqfdra vfqgetitpq lvktkfgwhi vktlwrt
//
LOCUS       WP_258101879              51 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5522 domain-containing protein [Marinoscillum pacificum].
ACCESSION   WP_258101879
VERSION     WP_258101879.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 51)
  AUTHORS   Ito,T., Matsubara,D., Tanaka,I., Makiya,K., Tanei,Z.I., Kumagai,Y.,
            Shiu,S.J., Nakaoka,H.J., Ishikawa,S., Isagawa,T., Morikawa,T.,
            Shinozaki-Ushiku,A., Goto,Y., Nakano,T., Tsuchiya,T., Tsubochi,H.,
            Komura,D., Aburatani,H., Dobashi,Y., Nakajima,J., Endo,S.,
            Fukayama,M., Sekido,Y., Niki,T. and Murakami,Y.
  TITLE     Loss of YAP1 defines neuroendocrine differentiation of lung tumors
  JOURNAL   Cancer Sci 107 (10), 1527-1538 (2016)
   PUBMED   27418196
REFERENCE   2  (residues 1 to 51)
  AUTHORS   Schmidt,J., Braggio,E., Kortuem,K.M., Egan,J.B., Zhu,Y.X.,
            Xin,C.S., Tiedemann,R.E., Palmer,S.E., Garbitt,V.M., McCauley,D.,
            Kauffman,M., Shacham,S., Chesi,M., Bergsagel,P.L. and Stewart,A.K.
  TITLE     Genome-wide studies in multiple myeloma identify XPO1/CRM1 as a
            critical target validated using the selective nuclear export
            inhibitor KPT-276
  JOURNAL   Leukemia 27 (12), 2357-2365 (2013)
   PUBMED   23752175
REFERENCE   3  (residues 1 to 51)
  AUTHORS   Chan,C.X., Reyes-Prieto,A. and Bhattacharya,D.
  TITLE     Red and green algal origin of diatom membrane transporters:
            insights into environmental adaptation and cell evolution
  JOURNAL   PLoS One 6 (12), e29138 (2011)
   PUBMED   22195008
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037605.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17653.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..51
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..51
                     /product="DUF5522 domain-containing protein"
                     /calculated_mol_wt=6052
     Region          10..50
                     /region_name="DUF5522"
                     /note="Family of unknown function (DUF5522); pfam17653"
                     /db_xref="CDD:435947"
ORIGIN      
        1 makgkkykgl eeedfyytee gflvftekyh rkrgyccksg crhcpygfkr n
//
LOCUS       WP_258102569            1326 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA domain-containing protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258102569
VERSION     WP_258102569.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024487.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13087.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1326
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..1326
                     /product="AAA domain-containing protein"
                     /calculated_mol_wt=154522
     Region          9..146
                     /region_name="DUF4011"
                     /note="Protein of unknown function (DUF4011); pfam13195"
                     /db_xref="CDD:463806"
     Region          297..>354
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            319..325
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          401..1209
                     /region_name="DNA2"
                     /note="Superfamily I DNA and/or RNA helicase [Replication,
                     recombination and repair]; COG1112"
                     /db_xref="CDD:440729"
ORIGIN      
        1 mekvlqsylr rltnlssnnr sllflrlisd qsidlhafdh aindvsfnii eqliakkrsi
       61 plvqqidthd gsgnqlaerl kkidriekfi fqergardly vgwpfirgkf vddtlvrapl
      121 iffpvtlsls knqwslqlrd qvnitfnktf llayahynqv pvdeelveti lsdldddatv
      181 frtklyqilk qsqleinfnq dnfvdklssf rnykkaelnk eektgklkly peavlgifpq
      241 agsylvpdyl kllaspveqs ladfftsrrk enpeaesktk fsdkvkeent ftpfdcdasq
      301 eralrlvkng nsmviqgppg tgksqlicnl isdyiargkn vllisqkkaa ldvvfnrlks
      361 kelhdfvglv hdfkndrksi fdqvarqidn idaykqknng ldaiylertf qqssrkidqt
      421 veeldeykra lfdeaesgks ikelylisdp neqhislnqd yrqfhyqevp giiqkfrqyl
      481 dyhtkfsdhs ffnnrpnysh ftagdlskik diitqagdfq eklkkesasf ltspmdyetc
      541 lhfltqrenl eqlitnldne tvfkyfqlmq eheterppwl tdqerimmnc fkgsgvetsl
      601 pardlgrfqe slehaikark nifswvkwkl fskdkifitr ilitnrlksd rqgfevlldr
      661 idnrlnfehl fseiqerkwl idfpksfrii diqnwffyqk lafrsndiah girtlsdfap
      721 skeharasyv sllkklgnfl dqvptqqklw srylnekqir qlmlgkvsaq einkeltssf
      781 dslveydkik ssmssseiki ienlistceg peeiievlqn sialawidhi eakfpilrav
      841 sslkmnhlsq elqesvrekk evseeilllk arertyheve fnrqnnmvty relyhqvtkk
      901 rkvwpirkvi heykeelfal lpcwmaspes asaifpmeei fdiiifdeas qcfaergipg
      961 myrgkqvvia gddkqlqpnd lyrvrweded lielevdsll slgkqylpev slqghyrsks
     1021 leliafsneh fynnklkvlp dyrhvaemkn pihfikvngt wedsinreea stvvklvqri
     1081 lkenpqkeig vvtfnvsqqs hildllddlq aneeftlpdt ffvknienvq gdekdviift
     1141 tayghdkdgk lqlkfgslnq aggenrlnva vsrareeiyl vtslmpsemk tegtknqgpk
     1201 llrayldfah dvsegkwkpa pnhgdthnpe wylkkklekv dtasqlksel pfadltakne
     1261 ghyqglvltd ddlfyetlss kdaycdrmdq ftekhwpfvq fysreywldk ahaeeklrkf
     1321 virtss
//
LOCUS       WP_258102630             610 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258102630
VERSION     WP_258102630.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..610
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=70625
     Region          16..605
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 msespkrllk gqikrtllve tawevlnqvg giytvirskv ptvvkkwgpn ycllgpymph
       61 nvasefepie klddafgrtv krmremgygv hygewlisgr pkvilfelgt vmprigeiky
      121 elwehhgiss psddfllndv lafgemvriy ltqlsleagd skkviahfhe wmsasglpel
      181 rrtgvnvrti ftthatllgr ylamndplfy dhlpfldwqq eaehfniqtn agleraaahg
      241 ahvfttvsdv taaecrqllg rnpdyilpng innqrfevlh efqnmhleck krihsftmsh
      301 ffssytfdld ktlyfftsgr yeylnkgydl tlealarlnh rlqteksdvt vvmffitkrp
      361 fhginpnilh sralleefrs tidaiknqig nrllfesmnr ndnrlpelke fvddywklry
      421 rrtlqswksg alppivthnl hddstdeiln flrssnlvnh endrvkvvyh pdfinytnpl
      481 fsmdygqfvr gchlgvfpsy yepwgytple ciasgvptvt sdlagfgdyv sdqvpdhdkr
      541 giyivkrnkk sfdeaagqma nrmynyirln rrqridlrnr teasavlfdw dnlvkyyeaa
      601 ytkaidikip
//
LOCUS       WP_258102677             367 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258102677
VERSION     WP_258102677.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..367
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=42608
     Region          2..362
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mkiaiigsrg ypyvysgyet fvketfellk ekheihvyah rhlyterpke vngihihyip
       61 tvdtkalsql snsflatlha llflrfdiil yvntangpfg lltklfrkrt aiitdglewq
      121 rpkwkgfgar yfywasrlst kvfdqlisds eemrriylee fnkdsvviey gahlkesrqa
      181 drlesigiip reyylivgrl ipdnnadliv eafsktsskk klvivgdvpy edeyarniks
      241 fasdkiiftg yvkdqellme lysnayiyvh gheyggtnpt llkalaygcc ilaldtpfsr
      301 evllddkhgf yfqkkiqsiv dqvafldnqe gmieekrvis rsritekytw eriaqeydhl
      361 fkglvnn
//
LOCUS       WP_258102673             363 aa            linear   BCT 02-MAR-2025
DEFINITION  Wzz/FepE/Etk N-terminal domain-containing protein [Marinoscillum
            sp. MHG1-6].
ACCESSION   WP_258102673
VERSION     WP_258102673.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 363)
  AUTHORS   Franco,A.V., Liu,D. and Reeves,P.R.
  TITLE     The wzz (cld) protein in Escherichia coli: amino acid sequence
            variation determines O-antigen chain length specificity
  JOURNAL   J Bacteriol 180 (10), 2670-2675 (1998)
   PUBMED   9573151
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014732.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02706.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..363
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /calculated_mol_wt=40404
     Region          1..>362
                     /region_name="GumC"
                     /note="Exopolysaccharide export protein/domain GumC/Wzc1
                     [Cell wall/membrane/envelope biogenesis]; COG3206"
                     /db_xref="CDD:442439"
ORIGIN      
        1 mseekqskvt yddeidlvel akhiwsrrkf iakftgifvl vglfvaftsk deytstckll
       61 petqegglgn lgtlgglagl agidlssmsg sagglspsly pelvsskpfm yslinepirf
      121 esldttmssf iyfkevyspg llgllfeytv glpgkikskl natkpevsea tdgeyvrlsk
      181 eqakiiekti drieigtnpe ngvisvevem pdpyaaavla nmvvdkltne virykiekaq
      241 ismefiqery reaerlyglk qqklaiysdr nrnvtsslvq ieqnrlenev diafevfkgl
      301 asqleqakik vkeetpvfti lepvdipsek snirlsilmi vmlfggftls alwvlivsfl
      361 dne
//
LOCUS       WP_258102686             817 aa            linear   BCT 02-MAR-2025
DEFINITION  SLBB domain-containing protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258102686
VERSION     WP_258102686.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 817)
  AUTHORS   Burroughs,A.M., Balaji,S., Iyer,L.M. and Aravind,L.
  TITLE     A novel superfamily containing the beta-grasp fold involved in
            binding diverse soluble ligands
  JOURNAL   Biol Direct 2, 4 (2007)
   PUBMED   17250770
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022007.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10531.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..817
                     /product="SLBB domain-containing protein"
                     /calculated_mol_wt=89677
     Region          151..316
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          320..>355
                     /region_name="SLBB"
                     /note="SLBB domain; pfam10531"
                     /db_xref="CDD:463136"
     Region          402..>444
                     /region_name="SLBB"
                     /note="SLBB domain; pfam10531"
                     /db_xref="CDD:463136"
     Region          <493..582
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          <590..713
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
     Region          <711..790
                     /region_name="Wza"
                     /note="Periplasmic protein Wza involved in polysaccharide
                     export, contains SLBB domain of the beta-grasp fold [Cell
                     wall/membrane/envelope biogenesis]; COG1596"
                     /db_xref="CDD:441204"
ORIGIN      
        1 miknqlaamm vilcvathlg aqnlgtsanl qnievdnltd eqlenfleka kasgyteqql
       61 evlarargms paqiaklkar alqrgaasvs gqvnadarvr rlpqvaeein tdfdpyadly
      121 ihtdsldeps eifgmafftn gkltfepsmn iptpenyllg pgdemiidiw gasevtyrlt
      181 ispegsilip rlgpvylngl tvekaasklg iklksifssl gsntfyqvsl gqiktisvnv
      241 vgevakpgty qlssfgtafn alyqaggpse sgslreifvf rngkkvaeld aykfliygeg
      301 eaiklqdqdv vlvkpyvahv kvdgevkrpm iyevkadetl aslldfcggf ngqaysksvs
      361 lqrnaenfkt irtvgkgafe slnlqdgdev eivkisnyfv nrvrvegavn hpgsfelqeg
      421 mklsdaiala dglrkdafll raliirened ltlsnipfep vevlsgsvdf elnsgdliki
      481 qsifdlreal iltidgeara pgdfpfvsgm tvedlillag gfseaaarsv veisrrvtsq
      541 pdedtkasev ynfpisenlg lseeassfkl apfdlvvirk spfyerqaiv qvdgevqfpg
      601 kyaleskter isdlirrsgg ftsiafvega slirksdyfa aedenktvad vrreelegli
      661 rrdtlvdsge eefkelepig ielkkimddp gseydlilks gdilnvprkl qtvrvrgevl
      721 rpgivrysks sslkqfvgqa ggftedarkr rayvvyangt tdktnsflwl knypdvepga
      781 eiiipekper rkmlpqevig istglatlal iinnlan
//
LOCUS       WP_258102701              63 aa            linear   BCT 02-MAR-2025
DEFINITION  CcmD family protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258102701
VERSION     WP_258102701.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040113.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20077.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..63
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..63
                     /product="CcmD family protein"
                     /calculated_mol_wt=7198
     Region          <14..55
                     /region_name="CcmD_alt"
                     /note="CcmD family protein; pfam20077"
                     /db_xref="CDD:466281"
ORIGIN      
        1 minlltilsl llqvpmadtf rsdgkiyvvi aiiliillgm ffylfrldkk igqieeelkd
       61 kek
//
LOCUS       WP_258102703             839 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome c biogenesis protein CcsA [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258102703
VERSION     WP_258102703.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 839)
  AUTHORS   Sawyer,E.B. and Barker,P.D.
  TITLE     Continued surprises in the cytochrome c biogenesis story
  JOURNAL   Protein Cell 3 (6), 405-409 (2012)
   PUBMED   22723177
REFERENCE   2  (residues 1 to 839)
  AUTHORS   Stevens,J.M., Mavridou,D.A., Hamer,R., Kritsiligkou,P.,
            Goddard,A.D. and Ferguson,S.J.
  TITLE     Cytochrome c biogenesis System I
  JOURNAL   FEBS J 278 (22), 4170-4178 (2011)
   PUBMED   21958041
REFERENCE   3  (residues 1 to 839)
  AUTHORS   Sanders,C., Turkarslan,S., Lee,D.W. and Daldal,F.
  TITLE     Cytochrome c biogenesis: the Ccm system
  JOURNAL   Trends Microbiol 18 (6), 266-274 (2010)
   PUBMED   20382024
REFERENCE   4  (residues 1 to 839)
  AUTHORS   Page,M.D., Pearce,D.A., Norris,H.A.C. and Ferguson,S.J.
  TITLE     The Paracoccus denitrificans ccmA, B and C genes: cloning and
            sequencing, and analysis of the potential of their products to form
            a haem or apo- c-type cytochrome transporter
  JOURNAL   Microbiology (Reading) 143 (Pt 2), 563-576 (1997)
   PUBMED   9043133
REFERENCE   5  (residues 1 to 839)
  AUTHORS   Delgado,M.J., Yeoman,K.H., Wu,G., Vargas,C., Davies,A.E.,
            Poole,R.K., Johnston,A.W. and Downie,J.A.
  TITLE     Characterization of the cycHJKL genes involved in cytochrome c
            biogenesis and symbiotic nitrogen fixation in Rhizobium
            leguminosarum
  JOURNAL   J Bacteriol 177 (17), 4927-4934 (1995)
   PUBMED   7665469
REFERENCE   6  (residues 1 to 839)
  AUTHORS   Thony-Meyer,L., Fischer,F., Kunzler,P., Ritz,D. and Hennecke,H.
  TITLE     Escherichia coli genes required for cytochrome c maturation
  JOURNAL   J Bacteriol 177 (15), 4321-4326 (1995)
   PUBMED   7635817
REFERENCE   7  (residues 1 to 839)
  AUTHORS   Bonnard,G. and Grienenberger,J.M.
  TITLE     A gene proposed to encode a transmembrane domain of an ABC
            transporter is expressed in wheat mitochondria
  JOURNAL   Mol Gen Genet 246 (1), 91-99 (1995)
   PUBMED   7529870
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013725.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01578.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     gene            1..839
                     /gene="ccsA"
     Protein         1..839
                     /product="cytochrome c biogenesis protein CcsA"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /GO_process="GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /calculated_mol_wt=94629
     Region          6..>531
                     /region_name="CcmF"
                     /note="Cytochrome c biogenesis protein CcmF [Energy
                     production and conversion, Posttranslational modification,
                     protein turnover, chaperones]; COG1138"
                     /db_xref="CDD:440753"
ORIGIN      
        1 mvhllignlg hllvivafvt sllatfsfwk stnnqestwa gfakwmyyih vmailgvctt
       61 lfliinqqyf eyhyafsyts kylpiyyqis sfwngqegsf llwmfwnail gviliqtnkt
      121 wkapmmmffs ftqvflvsmi mgvvifggki gsspfmllrd vvsdpifdid pnfipedgrg
      181 lnpllqnywm vihpptlflg fattvipfay claglytgrf kewirpalpw aqfsaavlgl
      241 gilmgayway etlnfggywn wdpvenaiyv pwlvmvaaih tmiafkknet alkasiilvi
      301 ttyvlivyst fltrsgilgn asvhsftdlg lsgqlliylf vfiilsivva ariwpsipsa
      361 keevsaysre fwifigatal slmafqviip tsipvwneii effggnsnla ppaeqvefyt
      421 kfqlyfavai allsgtgqff wwkkmdrael kkqlstpvmi alilsaliiv ifkiqvagyi
      481 llltasvysv vantkiflsv aksniklsgg aithigvafm llgilfssgy skilsknntg
      541 lvwskefpde vnqnnlllfl neprqmadys ltykgirkls kdygyvdlnd iegaisplei
      601 iiaretktst gemlqpgdti difnpensyf eveyqkhsga sftlfprlqm nesmdmlvys
      661 pdinrtvtad lythvrtfpd pesetnwsev kevkaepgmt ffindyvakf vsmepldeva
      721 gvamkdgdla iktlieiqge nktyqaepiy iikdkmagri pyvvndlask itvqsilpee
      781 nsfvfgvstt qkdwiiieav ekpwinilwl gtlllvigfg vatnrrytef vkmrdkgme
//
LOCUS       WP_258102732             253 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258102732
VERSION     WP_258102732.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 253)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..253
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=28032
     Region          1..253
                     /region_name="PRK10673"
                     /note="esterase"
                     /db_xref="CDD:182637"
ORIGIN      
        1 mklnfrtlge gkpliilhgl fgsadnwqtl akgfagnyqv ylvdqrnhga sphsnefnyd
       61 lmvqdlkelf ddenigqasi lghsmggkta mcfaaqypel vdrlivvdig pkqypphhen
      121 ifnayrsldl skitsrkeae eelskvihev gvrlfilknl grngdngfew kinldglean
      181 asevgralda sdkfdgptlf igganshyik dedsdtilsh fpeasiqkid gaghwvhadk
      241 pkelyemvsg fls
//
LOCUS       WP_258102918             152 aa            linear   BCT 02-MAR-2025
DEFINITION  TerB family tellurite resistance protein [Marinoscillum sp.
            MHG1-6].
ACCESSION   WP_258102918
VERSION     WP_258102918.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 152)
  AUTHORS   Burian,J., Tu,N., Kl'ucar,L., Guller,L., Lloyd-Jones,G.,
            Stuchlik,S., Fejdi,P., Siekel,P. and Turna,J.
  TITLE     In vivo and in vitro cloning and phenotype characterization of
            tellurite resistance determinant conferred by plasmid pTE53 of a
            clinical isolate of Escherichia coli
  JOURNAL   Folia Microbiol (Praha) 43 (6), 589-599 (1998)
   PUBMED   10069007
REFERENCE   2  (residues 1 to 152)
  AUTHORS   Jobling,M.G. and Ritchie,D.A.
  TITLE     The nucleotide sequence of a plasmid determinant for resistance to
            tellurium anions
  JOURNAL   Gene 66 (2), 245-258 (1988)
   PUBMED   3049247
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05099.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..152
                     /product="TerB family tellurite resistance protein"
                     /calculated_mol_wt=16869
     Region          25..152
                     /region_name="terB_like"
                     /note="tellurium resistance terB-like protein; cl11965"
                     /db_xref="CDD:448369"
     Site            order(37,44,103,106,113)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143581"
ORIGIN      
        1 mdsalnvvsp vfygislvpr slwrvygytl ltiagsdgiv sdpelewltm dlagkvgvpd
       61 eiiedweafd ydmadleelf ssfnsstisn fsklllydai rmsyadgeya leekekvmqa
      121 aqmmnvsids vvaiealvdl eqaaeklrmt lf
//
LOCUS       WP_258102928             280 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase domain-containing protein [Marinoscillum sp.
            MHG1-6].
ACCESSION   WP_258102928
VERSION     WP_258102928.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024880.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13489.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..280
                     /product="methyltransferase domain-containing protein"
                     /calculated_mol_wt=32860
     Region          <108..182
                     /region_name="UbiG"
                     /note="2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,
                     4-benzoquinol methylase [Coenzyme transport and
                     metabolism]; COG2227"
                     /db_xref="CDD:441829"
ORIGIN      
        1 myekleqcps ckhtqfnnfl ickdllasee sfalvrctkc qlvftnprvs pdhlkdyqfs
       61 ldmgnqpflv rqtykhlyfs fykeqlksvf nysqptnild lsnhhlsysr flsnkgwnvt
      121 sqpfdinnqd tfldslskdk tqtyssilcl ntlqriydvk rvikllrkkl npegylfisl
      181 pnyqsieakh sqqswpgydv prtqyhfnqq afsiflkank lnlidaipit tygrylhfiq
      241 qlvlkekisv krliektrqs nklaksdtad hsmylyvlsk
//
LOCUS       WP_258103023             504 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5723 family protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258103023
VERSION     WP_258103023.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040164.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18990.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..504
                     /product="DUF5723 family protein"
                     /calculated_mol_wt=55594
     Region          45..410
                     /region_name="DUF5723"
                     /note="Family of unknown function (DUF5723); pfam18990"
                     /db_xref="CDD:465943"
ORIGIN      
        1 mkklgavilt lclsglslvh aqtslsfyql ggttfqnssy npthlpdgki ffglpvlsgi
       61 hlnynnrlgy seviatnpet gnpkiyprta lkamgnnnli rvhstigllh lgvrlnngls
      121 isafanerfe sdvfftqqti kffvkgnnsl idqrvevgkn ranishfrei glgvtlpspd
      181 fpvvmgarlk ylqgftnvst pgnqsafvst saesyditge legamlrtsg mdligdgshy
      241 gfnkntgfav dlgfewqmnk ynvisgsivd lgfiswkedi knhylqdttf sytgvdlnql
      301 nnvrktildt laghfkkrsn nnsyttllgt kifaswvyht pypggdvvss igtrylqgkl
      361 ntmlgvgyrq rfgnffvgsv nltklpqqff nigssfavqg gpvqfymavd qvvnfdltkf
      421 qafdarvgin fvirqrssgi tgggamttfd knkndtkrks sggaknqsfm gskvkvrsnd
      481 giynvipkqk rrkkeeyfpn ndpn
//
LOCUS       WP_258103013             420 aa            linear   BCT 02-MAR-2025
DEFINITION  aspartyl protease family protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258103013
VERSION     WP_258103013.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025034.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13650.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..420
                     /product="aspartyl protease family protein"
                     /calculated_mol_wt=47193
     Region          55..156
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(74,76,78,103..105,154)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133150"
     Site            74..76
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133150"
     Site            74
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133150"
     Site            order(103..106,110..113)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133150"
     Region          217..285
                     /region_name="Asp_protease_2"
                     /note="Aspartyl protease; pfam13650"
                     /db_xref="CDD:433378"
     Site            order(220,222,224,249..251)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133150"
     Site            220..222
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133150"
     Site            220
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133150"
     Site            order(249..252,256..259)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133150"
     Region          <347..>418
                     /region_name="CtpA"
                     /note="C-terminal processing protease CtpA/Prc, contains a
                     PDZ domain [Posttranslational modification, protein
                     turnover, chaperones]; COG0793"
                     /db_xref="CDD:440556"
ORIGIN      
        1 mpkahpvrkl liiglaalge ivlflqpkay cqsqigfima ptvdkveief erynnlivip
       61 lqinnqlslk fvldtgaesi ilteklfadf lnlnfireit lnapgvadsi tafvahdvsl
      121 sldknlkadn mnvlvlaqdy ielqknlgee vygiigyeif hryvvdiqyd dnkliihrpe
      181 tykpkrfqte vpitvsyakp fipmvieqng lrdtlifmvd tgashaalvd vstshrliyp
      241 kqviptrlgr glggeipgki grmnkciidk yefsdvlvsi pedgayskai krgtkygtig
      301 gdllsrfnvv fdyvhekmyl dkghnykspf eynmsgmslm aegddldqii vthvidqspa
      361 hvagiqagdi vikingqnli nsslgniqhl lrsrprkkir vtflrhgeki kskfrlkrli
//
LOCUS       WP_258103112             670 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha amylase C-terminal domain-containing protein [Marinoscillum
            sp. MHG1-6].
ACCESSION   WP_258103112
VERSION     WP_258103112.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 670)
  AUTHORS   Strobl,S., Maskos,K., Betz,M., Wiegand,G., Huber,R.,
            Gomis-Ruth,F.X. and Glockshuber,R.
  TITLE     Crystal structure of yellow meal worm alpha-amylase at 1.64 A
            resolution
  JOURNAL   J Mol Biol 278 (3), 617-628 (1998)
   PUBMED   9600843
REFERENCE   2  (residues 1 to 670)
  AUTHORS   Larson,S.B., Greenwood,A., Cascio,D., Day,J. and McPherson,A.
  TITLE     Refined molecular structure of pig pancreatic alpha-amylase at 2.1
            A resolution
  JOURNAL   J Mol Biol 235 (5), 1560-1584 (1994)
   PUBMED   8107092
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014822.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02806.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..670
                     /product="alpha amylase C-terminal domain-containing
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0043169 - cation binding [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=78305
     Region          10..670
                     /region_name="PLN02447"
                     /note="1,4-alpha-glucan-branching enzyme"
                     /db_xref="CDD:215246"
ORIGIN      
        1 mpektkipil vqndpwlspy vddinnrtar fenrkkeiek nygslqafas ayeyyglnys
       61 kkekgwwyre wapnahalyl tgdfnkwdke shpmkknqfg vweifipdgk sgiahesafk
      121 vhvvgnngsm dripayakyc tqdevnydft arawnpakpy kwknkkfdlk tpnekpliye
      181 chigmaqeke gigtykefte kvlpkvkeqg yntlqvmavq ehpyygsfgy hvssffapss
      241 rfgtpydlke lvdtahgmgi avvmdivhsh avkniaegln efdgtedqyf hpggrgnhdq
      301 wdsklfnygk eevqrfllsn vkywieefnf dgyrydgits mlyfhhgnis fdhydkyfnd
      361 tdwdvltylq lanvlakeik phailiaedm sgmpglcrpv eegglgfdfr lamgipdywi
      421 kllkhksdee wnihemwqtl snrrygerti ayseshdqal vgdksvafwl mdkemythmh
      481 inhesliidr gialhklirl ftislggegw lnfignefgh pewvdfpreg ngwsykyarr
      541 qwnlqehpel ryqylynfga dmvkmvneyn iinalpgqql nmdetnhtmv yernnvifal
      601 nfhhhnsipd yrfrvpekgk ykiilnsdkk eyggfdrldd amtyptvtlf gehflsiylp
      661 srvgvvlkkv
//
LOCUS       WP_258103117             198 aa            linear   BCT 02-MAR-2025
DEFINITION  HNH endonuclease [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258103117
VERSION     WP_258103117.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 198)
  AUTHORS   Krishna,S.S., Majumdar,I. and Grishin,N.V.
  TITLE     Structural classification of zinc fingers: survey and summary
  JOURNAL   Nucleic Acids Res 31 (2), 532-550 (2003)
   PUBMED   12527760
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024784.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13392.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..198
                     /product="HNH endonuclease"
                     /calculated_mol_wt=23152
     Region          82..123
                     /region_name="HNHc"
                     /note="HNH nucleases; HNH endonuclease signature which is
                     found in viral, prokaryotic, and eukaryotic proteins. The
                     alignment includes members of the large group of homing
                     endonucleases, yeast intron 1 protein, MutS, as well as
                     bacterial colicins, pyocins, and...; cl00083"
                     /db_xref="CDD:469607"
     Region          146..182
                     /region_name="HTH_CRP"
                     /note="helix_turn_helix, cAMP Regulatory protein
                     C-terminus; DNA binding domain of prokaryotic regulatory
                     proteins belonging to the catabolite activator protein
                     family; cl46859"
                     /db_xref="CDD:481199"
ORIGIN      
        1 mseltsdlpg nlpegfetrk nevwkeyire dlrskfmisn lgrvlsypsn npenpillsg
       61 yknmgyyaip tkkkdgkntl iyvhklvael fvpnpdnykk lvfkdrkren cradnlqwms
      121 keefadvmre rksvyyykpd hkpntkltpa kvallkkmin dpnrktryki iakrfginig
      181 tlfsikrgds wkeveplk
//
LOCUS       WP_258102948             221 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258102948
VERSION     WP_258102948.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 221)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..221
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=25101
     Region          5..206
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Site            order(9,11,37,67..68,126,165)
                     /site_type="active"
                     /db_xref="CDD:277317"
     Site            order(9,11,37,67,126,165)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277317"
ORIGIN      
        1 mrkryvigdi hgclktflql ieeiqpdhsd rvillgdyis kgpepllvle aikelesktn
       61 lialrgnhdq flldyysspt teledqlieq gneellalda peknklfklv sgfplwhedn
      121 eniyvhagln fdhpnpfqdt fsllnirqmn yrptlvngkr iihghvpehl dtivdaiase
      181 erivgldngc vykntpqlgn lvcldlfenr iitvanvddy t
//
LOCUS       WP_258103141             872 aa            linear   BCT 02-MAR-2025
DEFINITION  WG repeat-containing protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258103141
VERSION     WP_258103141.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026253.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14903.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..872
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..872
                     /product="WG repeat-containing protein"
                     /calculated_mol_wt=100855
     Region          163..262
                     /region_name="tol_pal_ybgF"
                     /note="tol-pal system protein YbgF; TIGR02795"
                     /db_xref="CDD:188247"
     Region          732..761
                     /region_name="WG_beta_rep"
                     /note="WG containing repeat; pfam14903"
                     /db_xref="CDD:464361"
ORIGIN      
        1 mkqrqstnkl yllitlffgv cffsngqnlk kvekellkad fedlkqqiek siekdsghfa
       61 nyyflshyfl dttqgqfsld sarvninkal tlapnansdq mdvwgkteis lnaldtlksh
      121 iallayrkyt rpasvssldi fltyypdskq fpaalrmrds iaydeataag nwqafktfid
      181 lypeshlfmk akenyhllly qdqtksgele sylaflkenp etphraeaea iilkkmtlth
      241 rpedyidfin rfpkssmrkh aadilyyqyk lgkipnikdv lnlhpdkdsl iainnleqkq
      301 lvplysdgqy slmdekgevi egllfkdiks dyycggilde wlvvkpkekw allnrqglql
      361 aenvssvtni geelmiveqq nkrllyhktg nlvsklaldd vrivfdewil fkqgelwglm
      421 sfngevvlpp lyaeiredgf flilesenek ygitslsqlp elyrtgqqvq tdfddyevmg
      481 dslcigfigk ietlmdrnmk mlirpgwqri fikpnmwyiq rndlyyvfdq elgelrreeh
      541 sglitnsnfm aikdstkwnv ygpgsqfais vdsiglises lafyhlngkd yllftngqtf
      601 qlqsndefhl igpansagfv vitsgksqev ldmkgermfi gskfnkieyl nnnyvivryg
      661 nkygiytlge gylirpgydl iqrstdglth llknnllgcv ntfdrtiipp vyeakltffg
      721 ehyfvtkngl kgvvdkdnkp vipieydeir qwndssywar kwdfwslmty dgrvvfdnvs
      781 slrpwltntt gqyflfrqdd gygiihatkg ilidpkyndi vnvgteehpv yfteqhlkka
      841 dffvvtyfds ngetlksqay rpheyeniyc dq
//
LOCUS       WP_258103179             316 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Marinoscillum
            sp. MHG1-6].
ACCESSION   WP_258103179
VERSION     WP_258103179.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 316)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..316
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=35590
     Region          3..309
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(8,10..11,13,34..36,74..76,114..116,141,145,168..171)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(93,116,141,145)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mdkiliigac gqlgteltlk lramkgrdsv vatdlqnepp kivgdgpyep lnildsdrfh
       61 eilsthdike vyhlaailsa kgednpkfaw klnmeslltv leagrnkvkk iywpssiavf
      121 gkdtpkenvp qktimnpdtv ygisklager wceyyfqkyg vdvrslrypg ligykampgg
      181 gttdyavhvf hkaiaresye cfieegtvlp mmymedavra tielmeapid qvkvrssynl
      241 aamsfspmsi tteirkhypd fkitfvpdyr qkianswpas iddsearadw gwrheyglpe
      301 lvetmighlk dtivvs
//
LOCUS       WP_258103340             331 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA reductase [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258103340
VERSION     WP_258103340.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 331)
  AUTHORS   Lee,C.Y. and Meighen,E.A.
  TITLE     Cysteine-286 as the site of acylation of the Lux-specific fatty
            acyl-CoA reductase
  JOURNAL   Biochim Biophys Acta 1338 (2), 215-222 (1997)
   PUBMED   9128139
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017686.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05893.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..331
                     /product="acyl-CoA reductase"
                     /GO_function="GO:0003995 - acyl-CoA dehydrogenase activity
                     [Evidence IEA]"
                     /GO_process="GO:0008218 - bioluminescence [Evidence IEA]"
                     /calculated_mol_wt=37909
     Region          37..>151
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     Region          122..>191
                     /region_name="HemD"
                     /note="Uroporphyrinogen-III synthase (HemD) catalyzes the
                     asymmetrical cyclization of tetrapyrrole (linear) to
                     uroporphyrinogen-III, the fourth step in the biosynthesis
                     of heme. This ubiquitous enzyme is present in eukaryotes,
                     bacteria and archaea. Mutations in...; cl03649"
                     /db_xref="CDD:446154"
ORIGIN      
        1 mniearisaf iqladkikrl sndeledlys raeaenawft kenieralfg isyqldedkl
       61 nqwlskyqle peipkivgiv magniplvgf hdllcvlisg hfaaikassq dsflinkiis
      121 wlleiepgfk kslelrerlt gidaviatgs dntaryfehy fkdipsiirk nrssvavltg
      181 netaqelkal gkdifwyfgl gcrniskllv pkgykpdflf esiqefepvi hhhkyrnnyd
      241 ynksiylvns ephldtgflm wrkteelvsp isvmyaqeye stgeiqdiln ahkdkiqcvv
      301 grdyipfgka qlpelwdyad kvdtlkflaa l
//
LOCUS       WP_258103442             320 aa            linear   BCT 02-MAR-2025
DEFINITION  pectinesterase family protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258103442
VERSION     WP_258103442.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013276.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01095.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..320
                     /product="pectinesterase family protein"
                     /GO_function="GO:0030599 - pectinesterase activity
                     [Evidence IEA]"
                     /GO_process="GO:0042545 - cell wall modification [Evidence
                     IEA]"
                     /calculated_mol_wt=35656
     Region          5..312
                     /region_name="PemB"
                     /note="Pectin methylesterase and related acyl-CoA
                     thioesterases [Carbohydrate transport and metabolism,
                     Lipid transport and metabolism]; COG4677"
                     /db_xref="CDD:443713"
ORIGIN      
        1 mrkvalilsw vflygialaq eydftvakdg sgdfltvqea idavphlrkn rtviliksgv
       61 ykerlilptt ktnvtfigeg aektvltydd yaskpnrfge nmgtsgsssf yingdgfeay
      121 nitfenssgp vgqavavrvd gdkvkfencr flgfqdtlyp hgknsrqyyk ncyiegtvdf
      181 ifgwstayfe gceifckspg yvtaasteqe seygfvfrnc kisgsadkgs vylgrpwrpy
      241 aqtvfincem sevinragwd pwgseekkkt ayyaehgskg kggkvnervd wsfqlsadel
      301 dkytvqkvlg gwdpnsdsge
//
LOCUS       WP_258103462             286 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6089 family protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258103462
VERSION     WP_258103462.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039345.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19573.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..286
                     /product="DUF6089 family protein"
                     /calculated_mol_wt=32121
     Region          2..280
                     /region_name="DUF6089"
                     /note="Domain of unknown function (DUF6089); pfam19573"
                     /db_xref="CDD:437405"
ORIGIN      
        1 mknirlficf tllssslmaq dflswqlndr yfslhigtgs atyfgdlkhd shirkaasnl
       61 nfgletrlls kvsaraqvay fglkgtdaka kdstyarqrn lsfngnnwei slqgvyyifn
      121 ysgdyyrrkg aepylfagvg ashfnpktsi seqtialael qtegvdysqw alsfpvgmgv
      181 klrlntfmnl naevsyhftt sdylddvsrr ypsaypdltt elvsnrkdei pvinqdaydn
      241 ilieggrrgn pktkdsylfi nfqlefylpp dllsgngplf kkgsgg
//
LOCUS       WP_258103478            1382 aa            linear   BCT 02-MAR-2025
DEFINITION  two-component regulator propeller domain-containing protein
            [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258103478
VERSION     WP_258103478.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 1382)
  AUTHORS   Lowe,E.C., Basle,A., Czjzek,M., Firbank,S.J. and Bolam,D.N.
  TITLE     A scissor blade-like closing mechanism implicated in transmembrane
            signaling in a Bacteroides hybrid two-component system
  JOURNAL   Proc Natl Acad Sci U S A 109 (19), 7298-7303 (2012)
   PUBMED   22532667
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019135.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07494.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1382
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..1382
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /calculated_mol_wt=157031
     Region          2..1105
                     /region_name="COG3292"
                     /note="Periplasmic ligand-binding sensor domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:442521"
     Region          1119..1326
                     /region_name="OmpR"
                     /note="DNA-binding response regulator, OmpR family,
                     contains REC and winged-helix (wHTH) domain [Signal
                     transduction mechanisms, Transcription]; COG0745"
                     /db_xref="CDD:440508"
     Region          <1297..1361
                     /region_name="PRK13503"
                     /note="HTH-type transcriptional activator RhaS"
                     /db_xref="CDD:184094"
ORIGIN      
        1 mrvryiifll iavsgfdvka qssepsfqhi ttenglsqng vmaifkdsrg yiwfgtrdgl
       61 nryngyeiev frsdrfdsss isnnsitcis ednsgnvwig tedgvniydr yqnafkrlyl
      121 aprrgrnlye navgdittdr ngkvwvggsa glffygdgrm keyglndsvn tklsvyvnei
      181 fvddqnrlwm gtdehgllll dfesgkvnqf kpgnpgpygi rissivsvdn knlwvgfdas
      241 glgyfdvskk tfqmftssdk tkpslsndrv rcltvdskrn lwvgtyngln yfdlenwtik
      301 ayfhedlyeg rlsnnsirsl lvddtgifwv gtyfggvnmm dphaqtfkfy rsdpqnensi
      361 sfdvvgpmve dskgniwigt eggglnyfdt knnkfirypy npnvsgglsa ktvkslalds
      421 dgslwvgtyi rgldhfnied kkfvnyntst spsvcggnid vlfrdsnenl wvgtasgltv
      481 idpsrsnsrc yhtfsqshpa ltdnrvkaii eltngeiwvg tnggginifn nefkieeqyl
      541 ntdsdrnsls nnrvyciyed srsnvwvgty ggglnkfnsg tkdfynytvn dglvnaivya
      601 iledsdgflw lttpgglskf dpdeeiftny grgeglpite fnesaalkln ngefllggln
      661 glmllqpnsl ttnvykppvy itglkvfnee ekingrygil tqdisttndl efnhdqnnft
      721 lefvalnyts skknkyaykl egfdedwiqv gsqrfatytn idpgdyvfkv kasnndeiwn
      781 eegaslnitv npapwktwwa ysiytalaii lfmvvrrfll iqlklehnle verlskerte
      841 eitkmklqff tnishdfrtp ltliygpiee minelnvhne lrgrlqvvkk nvthllrlvg
      901 qlmdfrkldn gklelkvvke divdcmdsvi esfsdhakll dvslkfrtev qsmimyldrd
      961 kfekimfnll snsfkycnkk geiivslsid qdeemmvvkv kddgvgieks hldhifkpfy
     1021 qvsnrrkqnt gtgiglavtq glvnlhkgyi tidsivnkgt evvfglplae gayseeekae
     1081 liyeqdesva vapatmqtql seiqelpngy ldtehedfti livedneelr sflrrnlqkr
     1141 fkvieapngr egvhkaieim psliisdimm peldglelck ilkqdpktkh ipivlltakt
     1201 afdqkmqglq fgadeyltkp fsitelniri nniieyqrsv rkrvhkeefl svenlnelsa
     1261 dekllddlva lvkekmadtk isvaslskdm gisrvhlfrk ikqltgiapv elirkirlka
     1321 aahlleqnkl nvnevcyktg fqdtgyfrkc frkefgvspt eylqsnrvtp enftireiln
     1381 kd
//
LOCUS       WP_258103482             264 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1961 family protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258103482
VERSION     WP_258103482.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020785.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09224.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..264
                     /product="DUF1961 family protein"
                     /calculated_mol_wt=30450
ORIGIN      
        1 mktpllyvil apalfctiac hnktdknltp lkstllfdds gianwrenwi ldgeratvin
       61 tdlgmelrag pehgndtcht viwtkqsfkg dicieydytr tdtttrcvni lyfhasgkgn
      121 ddfpvdialw nekrtvphmd tyydnmhtyh isyaafsate ysgdndyirl rryhpngngl
      181 ngtgvpgdhf ktglfkpnvs yhiqvfkyqn rvemhiqnnq naseqlickw dvsmfpeces
      241 grvgfrhmyt rnarykdiki welk
//
LOCUS       WP_258103505             211 aa            linear   BCT 02-MAR-2025
DEFINITION  endonuclease/exonuclease/phosphatase family protein [Vibrio
            campbellii].
ACCESSION   WP_258103505
VERSION     WP_258103505.1
KEYWORDS    RefSeq.
SOURCE      Vibrio campbellii
  ORGANISM  Vibrio campbellii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 211)
  AUTHORS   Dlakic,M.
  TITLE     Functionally unrelated signalling proteins contain a fold similar
            to Mg2+-dependent endonucleases
  JOURNAL   Trends Biochem Sci 25 (6), 272-273 (2000)
   PUBMED   10838565
REFERENCE   2  (residues 1 to 211)
  AUTHORS   Mol,C.D., Kuo,C.F., Thayer,M.M., Cunningham,R.P. and Tainer,J.A.
  TITLE     Structure and function of the multifunctional DNA-repair enzyme
            exonuclease III
  JOURNAL   Nature 374 (6520), 381-386 (1995)
   PUBMED   7885481
REFERENCE   3  (residues 1 to 211)
  AUTHORS   Lahm,A. and Suck,D.
  TITLE     DNase I-induced DNA conformation. 2 A structure of a DNase
            I-octamer complex
  JOURNAL   J Mol Biol 222 (3), 645-667 (1991)
   PUBMED   1748997
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015338.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03372.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Vibrio campbellii"
                     /db_xref="taxon:680"
     Protein         1..211
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=23476
     Region          27..>208
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(74,76,116..117)
                     /site_type="metal-binding"
                     /note="metal binding site C [ion binding]"
                     /db_xref="CDD:197312"
ORIGIN      
        1 miryilpiiy llislavead eisappkims ynvymldhrl gifvggtnpn kraellsnsp
       61 vfddidvlvf nevfdnqast ilidalaqkf gyrtpvlgrt ksgwdhtegw rssslddggv
      121 ivlskypiey ksqvifregc gadwasqkgf ihavinknge rynivgthvq addntcsipp
      181 svvrqdqfaq ienyisganr sfdemfllpv i
//
LOCUS       WP_258103608             222 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Marinoscillum
            sp. MHG1-6].
ACCESSION   WP_258103608
VERSION     WP_258103608.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 222)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..222
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=24443
     Region          1..210
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(7,9..10,12,33..35,71..73,111..113,126,130,150..153)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(88,113,126,130)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mkaiitgatg mvgmgvllec ldhpeitqvl tigrskvnlg hpklkqvehm dfsdfstikd
       61 qlagydaayl cmgisaagln eaqytkityd ytlalakelv alnpqmtciy vsgegtdsse
      121 kgrimwarvk gktendiinl dfkqafafrp gailplrgik sktklyqtmy dylswllrli
      181 kkvspnsvvn tteiglsmin ltlkgydkkv irpkdilita kg
//
LOCUS       WP_258103654             285 aa            linear   BCT 02-MAR-2025
DEFINITION  M48 family metalloprotease [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258103654
VERSION     WP_258103654.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 285)
  AUTHORS   Quigley,A., Dong,Y.Y., Pike,A.C., Dong,L., Shrestha,L.,
            Berridge,G., Stansfeld,P.J., Sansom,M.S., Edwards,A.M., Bountra,C.,
            von Delft,F., Bullock,A.N., Burgess-Brown,N.A. and Carpenter,E.P.
  TITLE     The structural basis of ZMPSTE24-dependent laminopathies
  JOURNAL   Science 339 (6127), 1604-1607 (2013)
   PUBMED   23539603
REFERENCE   2  (residues 1 to 285)
  AUTHORS   Pryor,E.E. Jr., Horanyi,P.S., Clark,K.M., Fedoriw,N.,
            Connelly,S.M., Koszelak-Rosenblum,M., Zhu,G., Malkowski,M.G.,
            Wiener,M.C. and Dumont,M.E.
  TITLE     Structure of the integral membrane protein CAAX protease Ste24p
  JOURNAL   Science 339 (6127), 1600-1604 (2013)
   PUBMED   23539602
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013594.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01435.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..285
                     /product="M48 family metalloprotease"
                     /EC_number="3.4.24.-"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=30781
     Region          53..260
                     /region_name="Peptidase_M48_M56"
                     /note="Peptidases M48 (Ste24 endopeptidase or htpX
                     homolog) and M56 (in MecR1 and BlaR1), integral membrane
                     metallopeptidases; cl28898"
                     /db_xref="CDD:333718"
     Site            order(145..146,149,202,206)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:320692"
     Site            order(145,149,202)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:320692"
ORIGIN      
        1 mnkkiflnia vvalavlmit iqsckkddpc adlgkvggll tnltfpvaqd tilgaqvahq
       61 vdstymdsil lesanpqaya ylqsivddll asedilhrdl fkwkltiidq dvlnafatpg
      121 gyiyvytgli kyldnvddla gvmgheiaha drrhsvnqmi ksmklavvls iiaggdessa
      181 iaqyiaglvg tlkqlefsre deaeadaasv dyldetdfac ngaaeffrki eaeggagvpe
      241 flsthpnpsn rindidsras crgcstenst vningmtyae fkglf
//
LOCUS       WP_258103713             250 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Marinoscillum sp.
            MHG1-6].
ACCESSION   WP_258103713
VERSION     WP_258103713.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 250)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 250)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..250
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=27162
     Region          4..248
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(9,11..12,14,32..34,84..86,135..137,150,154,180..183)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(109,137,150,154)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mkeiamitga tsgigkatae vlanthrlii cgrrlerlee lrsnlhsqtd vvtlnfdvsi
       61 qadvhsaiqs lptewvnidv lvnnagnahg lapihagdlk dweamidinl kgllyvthev
      121 lpnmierktg hiinvgsiag ieaykngnvy naskyavdgl tksmrhdlte hnikvseikp
      181 gavntefsev rfkgdkarad kvyegflpls gqdvaeaiaf ivnspyhvni adllilpraq
      241 sgattvhknk
//
LOCUS       WP_258103718             350 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme [Marinoscillum
            sp. MHG1-6].
ACCESSION   WP_258103718
VERSION     WP_258103718.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..350
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /calculated_mol_wt=39326
     Region          8..329
                     /region_name="PucG"
                     /note="Archaeal aspartate aminotransferase or a related
                     aminotransferase, includes purine catabolism protein PucG
                     [Amino acid transport and metabolism, Nucleotide transport
                     and metabolism]; COG0075"
                     /db_xref="CDD:439845"
ORIGIN      
        1 mntanfypgp srvysnvpey iyeaymqgvm smnhrspecm elvsetkmil reklripaay
       61 eiaftssate nweiiaqslt ekgsfhfyng afgqkwfgya dkitkakgvk fdindelpqe
      121 evgeefdvia lthnetstgt kvsaarmaql rsdypehiit vdvtsslgge ridfdladyw
      181 yasvqkclgl paglglmils paamekayvl sekghynslv nilentrhnq tqytpnvlgi
      241 yllnrtqris kgidainkkl qqritsyhal vndlegiefl isnekvrsqt vltlkcddpa
      301 alraeakdhe iilgagygdl kphtfrianf paikgreidk lmtflrkkfa
//
LOCUS       WP_258103812             185 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6580 family putative transport protein [Marinoscillum sp.
            MHG1-6].
ACCESSION   WP_258103812
VERSION     WP_258103812.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042461.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20221.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..185
                     /product="DUF6580 family putative transport protein"
                     /calculated_mol_wt=20494
     Region          2..168
                     /region_name="DUF6580"
                     /note="Family of unknown function (DUF6580); pfam20221"
                     /db_xref="CDD:466372"
ORIGIN      
        1 mnkyfkdill gallvfvavf srvglhtpnf talaavalfs gfyfrsywsa ivplaavfis
       61 dlfigfyspg vmvlvygawv ltmmigrwnw gtsqtrmgtv lklagkalma sgsfylisnl
      121 gvwlfsgmyt lnitgliecy vlaipffrqt imgdlfytal vfgtyflaiy lsedkkevva
      181 vpvkk
//
LOCUS       WP_258103900             168 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphoribosyltransferase family protein [Marinoscillum sp.
            MHG1-6].
ACCESSION   WP_258103900
VERSION     WP_258103900.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 168)
  AUTHORS   Islam,M.R., Kim,H., Kang,S.W., Kim,J.S., Jeong,Y.M., Hwang,H.J.,
            Lee,S.Y., Woo,J.C. and Kim,S.G.
  TITLE     Functional characterization of a gene encoding a dual domain for
            uridine kinase and uracil phosphoribosyltransferase in Arabidopsis
            thaliana
  JOURNAL   Plant Mol Biol 63 (4), 465-477 (2007)
   PUBMED   17143579
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012383.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00156.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..168
                     /product="phosphoribosyltransferase family protein"
                     /GO_process="GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=19024
     Region          7..168
                     /region_name="PyrR"
                     /note="Pyrimidine operon attenuation protein PyrR/uracil
                     phosphoribosyltransferase [Nucleotide transport and
                     metabolism]; COG2065"
                     /db_xref="CDD:441668"
ORIGIN      
        1 mistdnliip ektvrqiikr fayeifennf aekeivlvgv ydkgyqmasl iqdqlkeisd
       61 fskialvkls vnkenplsse iqldqpidel sgksvvlidd vlnsgrtlvh clkalmetdv
      121 kkietvvlvd rshkrfpvla nykgyelstt ldehvevkld sdfgvyly
//
LOCUS       WP_258103963             491 aa            linear   BCT 02-MAR-2025
DEFINITION  M28 family peptidase [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258103963
VERSION     WP_258103963.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016289.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04389.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..491
                     /product="M28 family peptidase"
                     /calculated_mol_wt=54707
     Region          39..474
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     Region          110..204
                     /region_name="PA"
                     /note="Protease-associated (PA) domain. The PA domain is
                     an insert domain in a diverse fraction of proteases. The
                     significance of the PA domain to many of the proteins in
                     which it is inserted is undetermined. It may be a
                     protein-protein interaction domain. At...; cl28883"
                     /db_xref="CDD:333703"
ORIGIN      
        1 mktflytaii llvqigfaqk klakqinkev kkedyqsyvy flasdemrgr ntgtqeneia
       61 arfiaeqfrs fgvkpvpgte nyfqpvylqk skapreasvi lgdsvfnlwk dmifvstsnv
      121 dlkaemmfve ygfeedlegk dvegkiliak agngdpskgs ykfslqksal arergalgli
      181 elyrpsripw klivnylsgd qfaldhgqqs kpfpsgwlvd esgdllsyfk skdgeeitlk
      241 lsgsgnekvi apnvvayieg tdpelkddyi lisahldhvg vknvvggeds iwngardngi
      301 gianmintak yfakhpakrs ilflacnaee vgllgsqwya ehpliplekt vfnlntdtgg
      361 yddiskvtiv gfnrtsvtpy lvegadmfgl eaiddmfpee nfydrsdnvs faakgvpavs
      421 ygpgvvemga aitdyyhqpt depqtldydy likfskayiy tlnkiantnd vlwwtpgdky
      481 eedgkklygk n
//
LOCUS       WP_258103984             362 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258103984
VERSION     WP_258103984.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..362
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=41761
     Region          5..358
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mqpngknill ispepwdhif vskhhyarvl aergnhvvfa nppkgnwkls eseyvnlsil
       61 dypkfmkglr klpsfissrl irnrlkkien yckrrfdiiw sfdnsvffdf sllrtynish
      121 ivdlnqnfet araagtadvc fyttqfiger lktynpnahf ihhgyndggi sdpielpgeq
      181 svkilyagnl nmpyldwksl sdaisenpna dfifvgplad gemmlntteq yfnkvrsner
      241 vhllgkvdad dlpgyyatad vliicyqeeh hmdqanphkm meylgtgkci vatyteafse
      301 yqdtliemcd rntefpdrlk iciqdlsryn saeiqqkrrq laldntytrq veriesiigl
      361 dv
//
LOCUS       WP_258103987              69 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase, partial [Vibrio campbellii].
ACCESSION   WP_258103987
VERSION     WP_258103987.1
KEYWORDS    RefSeq.
SOURCE      Vibrio campbellii
  ORGANISM  Vibrio campbellii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 69)
  AUTHORS   Mullin,D.A., Zies,D.L., Mullin,A.H., Caballera,N. and Ely,B.
  TITLE     Genetic organization and transposition properties of IS511
  JOURNAL   Mol Gen Genet 254 (4), 456-463 (1997)
   PUBMED   9180700
REFERENCE   2  (residues 1 to 69)
  AUTHORS   Fischer,J., Maier,H., Viell,P. and Altenbuchner,J.
  TITLE     The use of an improved transposon mutagenesis system for DNA
            sequencing leads to the characterization of a new insertion
            sequence of Streptomyces lividans 66
  JOURNAL   Gene 180 (1-2), 81-89 (1996)
   PUBMED   8973350
REFERENCE   3  (residues 1 to 69)
  AUTHORS   Zekri,S. and Toro,N.
  TITLE     Identification and nucleotide sequence of Rhizobium meliloti
            insertion sequence ISRm6, a small transposable element that belongs
            to the IS3 family
  JOURNAL   Gene 175 (1-2), 43-48 (1996)
   PUBMED   8917074
  REMARK    Erratum:[Gene 1997 Mar 25;188(1):149]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01527.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..69
                     /organism="Vibrio campbellii"
                     /db_xref="taxon:680"
     Protein         1..>69
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          2..>69
                     /region_name="InsE"
                     /note="Transposase InsE and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2963"
                     /db_xref="CDD:442203"
ORIGIN      
        1 mnhspefrak vvleaakgdk tvaelaqkyn lhanqistwk kellenaami fasesqlskd
       61 nteevdklh
//
LOCUS       WP_258103999             172 aa            linear   BCT 02-MAR-2025
DEFINITION  LPS assembly lipoprotein LptE [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258103999
VERSION     WP_258103999.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Sperandeo,P., Lau,F.K., Carpentieri,A., De Castro,C., Molinaro,A.,
            Deho,G., Silhavy,T.J. and Polissi,A.
  TITLE     Functional analysis of the protein machinery required for transport
            of lipopolysaccharide to the outer membrane of Escherichia coli
  JOURNAL   J Bacteriol 190 (13), 4460-4469 (2008)
   PUBMED   18424520
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016290.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04390.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     gene            1..172
                     /gene="lptE"
     Protein         1..172
                     /product="LPS assembly lipoprotein LptE"
                     /GO_component="GO:0019867 - outer membrane [Evidence IEA]"
                     /GO_process="GO:0043165 - Gram-negative-bacterium-type
                     cell outer membrane assembly [Evidence IEA]"
                     /calculated_mol_wt=19056
ORIGIN      
        1 mrsiinslii itflglsgcg iygftgasis pdiktisiqt fynnaplgps nmtatftemi
       61 kdyyqqntsl tivdeegdlq vdgyianyqi spvaananrg tgdvsslsri titvfatyvn
      121 tqddqfdfer kfsffkdydp nqtdlasneq dfveeifdqi ildifnasva nw
//
LOCUS       WP_258104113             209 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104113
VERSION     WP_258104113.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 209)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..209
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=23437
     Region          1..209
                     /region_name="PRK15369"
                     /note="two component system response regulator"
                     /db_xref="CDD:185267"
ORIGIN      
        1 mskikilvvd dhqlfregii sllsknedle ivgecdsvng fydllketep hvvlmdismp
       61 evngleiike arskfentkf iiltmhaegq yvvkavknga fgyliknsde delitaikqv
      121 sagkkyfnse isqlmignma ldeeshkkls dremevldlv sqgrttkeia dqlfvsartv
      181 ethrvnmmkk lnvqntaeli kkaahlgli
//
LOCUS       WP_258104131             628 aa            linear   BCT 02-MAR-2025
DEFINITION  T9SS type A sorting domain-containing protein [Marinoscillum sp.
            MHG1-6].
ACCESSION   WP_258104131
VERSION     WP_258104131.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 628)
  AUTHORS   Veith,P.D., Nor Muhammad,N.A., Dashper,S.G., Likic,V.A.,
            Gorasia,D.G., Chen,D., Byrne,S.J., Catmull,D.V. and Reynolds,E.C.
  TITLE     Protein substrates of a novel secretion system are numerous in the
            Bacteroidetes phylum and have in common a cleavable C-terminal
            secretion signal, extensive post-translational modification, and
            cell-surface attachment
  JOURNAL   J Proteome Res 12 (10), 4449-4461 (2013)
   PUBMED   24007199
REFERENCE   2  (residues 1 to 628)
  AUTHORS   Glew,M.D., Veith,P.D., Peng,B., Chen,Y.Y., Gorasia,D.G., Yang,Q.,
            Slakeski,N., Chen,D., Moore,C., Crawford,S. and Reynolds,E.C.
  TITLE     PG0026 is the C-terminal signal peptidase of a novel secretion
            system of Porphyromonas gingivalis
  JOURNAL   J Biol Chem 287 (29), 24605-24617 (2012)
   PUBMED   22593568
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039201.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18962.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..628
                     /product="T9SS type A sorting domain-containing protein"
                     /GO_component="GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /calculated_mol_wt=68865
     Region          113..>289
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          <126..>193
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          130..155
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          156..177
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <461..511
                     /region_name="CarboxypepD_reg"
                     /note="Carboxypeptidase regulatory-like domain; pfam13620"
                     /db_xref="CDD:433354"
     Region          548..625
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mirlflisil ssvlisgfaq tagdtaryvi nsgggtssgg tyttyysigd paasdelavg
       61 atigadtvvq tvypgfipgn lillsfglkk dsavlvvlye sakgsgwvnn dgwlsdpnla
      121 nwhgveitnl rvsalnlpgn nlqnnfpevv knleklhtld vsdnnlkkfp nlstlpgltt
      181 lavekndlsf ndiapnvgtv etftyspqdp ygtvradtiq agnsktylst ipgattyqwq
      241 fdefstdtvl ysdlagqtss sitvsnldya kmgtykvvat spekvpglti essrkylfas
      301 tevsgavnvg gmplttgsei glfritedga ydsaafgnte vngtyqlgkv vlgnfvlkvd
      361 ptedyegenq liqtyyisqd dwqladvlev lnqkgdinid llfvgppaqq gsaqiygyie
      421 selddpfvie degrttarrk vrkaacsmrr fksqgrpdqq aeteiayyie tddegyfsfd
      481 gvedgtylin iqfpgvpmnn qsgveftigg dkenqvfevn alitelgiev eqteilfnwk
      541 pyikdvvlyp npsseyldin ytvyrdiddl kiqllaldgr klleidedhl kgrkhtridm
      601 stfstgsyll sftdedgtfk etrkvarq
//
LOCUS       WP_258104170             527 aa            linear   BCT 02-MAR-2025
DEFINITION  endo-1,4-beta-xylanase [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104170
VERSION     WP_258104170.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012551.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00331.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..527
                     /product="endo-1,4-beta-xylanase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=59661
     Region          26..358
                     /region_name="XynA"
                     /note="Endo-1,4-beta-xylanase, GH35 family [Carbohydrate
                     transport and metabolism]; COG3693"
                     /db_xref="CDD:442908"
     Region          375..430
                     /region_name="Flg_new_2"
                     /note="Divergent InlB B-repeat domain; pfam18998"
                     /db_xref="CDD:436898"
     Region          451..525
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     pfam18962"
                     /db_xref="CDD:436869"
ORIGIN      
        1 mtlitvlfle tsfnlltaqs idievptgrr lkkiaeekfi fdrvfigasv gykawgdtsf
       61 ailkrefnfv tptnefkqty ihpdpgtwrw ercdqwvdta alnghtmrmh spispqastw
      121 aktdtrtage letnmteymt elckryngve qikwmdvvne tverdgswfg pkdgtdkwen
      181 pwpligydit edglnppsyi rmafeianqy apdiklvynq hggmevvmwe kvkktilylk
      241 slglrvdalg wqahiasdfl ddetniiklk giiewahnnd lefhvtendv delgdeqaqa
      301 dvfaaivktv veqglngvvg wnawnirdsd gqkaaskpnf frqdgspkpg yyaiqevlen
      361 vvhsaeltsr vfgqgeitla pghyllnssl nlaaipakgy afwkwdgdls gsdslktlvm
      421 dadkyvaayf lqeddprlvl gsansdldim iypnpvnhrk inislpgtkp qqvqyqlyda
      481 agkvisqnqy dqtkmieier dadwnsgiyi lhiivddqvi qkklvln
//
LOCUS       WP_258104213             649 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Marinoscillum sp.
            MHG1-6].
ACCESSION   WP_258104213
VERSION     WP_258104213.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 649)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 649)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..649
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=72053
     Region          101..312
                     /region_name="Rhamnogalacturan_acetylesterase_like"
                     /note="Rhamnogalacturan_acetylesterase_like subgroup of
                     SGNH-hydrolases. Rhamnogalacturan acetylesterase removes
                     acetyl esters from rhamnogalacturonan substrates, and
                     renders them susceptible to degradation by
                     rhamnogalacturonases. Rhamnogalacturonans are...; cd01821"
                     /db_xref="CDD:238859"
     Site            order(109,146,178,295)
                     /site_type="active"
                     /db_xref="CDD:238859"
     Site            order(109,287,295)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238859"
     Region          583..649
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mmnfystlda krsfilllll vsltslyasv nhirveqssk elvapdgany ewyldgklmv
       61 mergqkikan nsgtysvkyt tengisrest isvvvsveai rtiyvigdst vqtyngssyp
      121 mmgwgqvlql ffdnaqasvs nhaiggrssr sfheegrwtp vrdalvtgdf vfiqwghndr
      181 dyskperytd taqykqylrl yvnetrekga ipilispmmm nsyprnvfte gtndyrgamf
      241 dvateldvhf idlnmlsyql lskvsveyak wylfmglevg eypnypdgws dfwthfqemg
      301 alsmatliid glealetads ditflkgaak dryqvnvsld nvnagmisqp iklpegahvt
      361 lkttmneggt fvrwengage tlttdrtyef tsatsastyk avtidcmgme ggsgyfdacd
      421 icidginntt ectkllnnac sssgklvtkt eydksvsyyq ftsgqtdtie ytlragkdad
      481 fsvgfkytna qsgqlvdvyi dkklaysgvs lkaasdnpiv qkfdfsllkg nhlvqfvfpd
      541 lktdlntglv lisydaalya ticdieiadp lsntpelegv tfypnpfkds atlklnapqs
      601 yriltlsgtt letgdclsec iigkdlkpgt yilqidskdd skgmliikn
//
LOCUS       WP_258104215             827 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase 115 family protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104215
VERSION     WP_258104215.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027309.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15979.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..827
                     /product="glycosyl hydrolase 115 family protein"
                     /calculated_mol_wt=95228
     Region          9..>96
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
     Region          173..512
                     /region_name="Glyco_hydro_115"
                     /note="Glycosyl hydrolase family 115; pfam15979"
                     /db_xref="CDD:435050"
     Region          672..821
                     /region_name="GH115_C"
                     /note="Gylcosyl hydrolase family 115 C-terminal domain;
                     pfam17829"
                     /db_xref="CDD:436074"
ORIGIN      
        1 mlkknifrii glilisvsca dgvedskfvi tkdskdiric vdqnaddlvk waakelsddm
       61 edilgrkvpv vliddviega sdiyigtied klvqglskny lpslqgkwen fvvdldqrnl
      121 aivgsdirgt lygvfdlaek mgispsswwa dvvptqndsi vidmltydsq rgpsvqfrgi
      181 flndedwglq pwaahtfepe tgdigpktye kifqlllrlk antiwpamhp stqaffkvsg
      241 nrkmaekyhi vvgtshaepm lrnnvdewdh erygefnyft nedgiksywq erveqtkngd
      301 ylytvgmrgi hdsgmegeas reekiqmlek viedqrtmls ntlgksakev pqvfvaykev
      361 lelydngllv peditlmwsd dnygyirrls dqaeqkregg sgvyyhlsyw grphdylwls
      421 ttqpgliwye mtrafqngak kiwianvgdi kpaeynmeff ldlawdvnsi seetihehlv
      481 dwasrefgns vgkevagvmd eyyrlaflrk peymgwsqte pttstrmtgf ttsnnneiqr
      541 ridaymrlvh rvesiksklv enrdaffqlv eypvkcaafm nhkflyaqqs aiekdeqqks
      601 mlnlkvqlaf dsivtlteky nkeisdgkwd hmmsmkprel pvfdlpeyhl adeypesasd
      661 vtksdestpv fiqgsdysea rsfdnyvwkt iaglgysmsg vtlypfehkv fsqespyley
      721 nfevknpgsy lirirclpth sndfnhkiwi etdkatsesi slntkgrstd wkvnvlrnyq
      781 eaafpvnfer sgeqrlrvyi nqtgividqi svnpigypey yeipnkd
//
LOCUS       WP_258104217             644 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Marinoscillum sp.
            MHG1-6].
ACCESSION   WP_258104217
VERSION     WP_258104217.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 644)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 644)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..644
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=71249
     Region          98..302
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(105,142,175,282,285)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(105,282,285)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(105,142,175)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
     Region          437..536
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cd00161"
                     /db_xref="CDD:467293"
     Site            order(450..452,456,458,465..466)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Region          570..643
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mkkyllvfhl vtlivffsda gvacssenia idqetstlia pegisyewyl ngvriddigp
       61 eleicesgny vvktlmmdge qriseitvnv dadgtvyriw tigdstmqty tagwyprmgw
      121 gqvfqaffdt thvevinkga ggtssksfye iaelwpaivs qlqpndfvli qfgindryks
      181 dparysdpta ptsqvgsyky nlkryvdesi akgaypilvs tirrnewsgt tnvdgygaya
      241 qaardlakei dvpildvdsl gkiamhevgq dyatqfwyvk ddiihiqemg aikcaelaie
      301 gmklnsddpt ianllphlrp tysinvttny pedvlvtqte qipsgltftl nafyddqalv
      361 wvgwhdgenn rvsydlpyyl kvgdqnysfe armdndfskl dcsgvyegga fidgcgdcaa
      421 gqtginacst gfdealtyqf rlvhsdmcmt pdnyveqhpc tgsknqvwml eaaseghyyi
      481 knvdlgtylv ssgsvtvmga tgtewriepd gefyrliakg nlnanlavsg kstfegvris
      541 tisrtsssaa hlfqiepkti lsigneglrv ypnpvnagel vlnidnqigt vkvelfslng
      601 nklisevvmt gvgelslekl tsgiyvfkvy qknevlfqek iivp
//
LOCUS       WP_258104218             785 aa            linear   BCT 02-MAR-2025
DEFINITION  RagB/SusD family nutrient uptake outer membrane protein
            [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104218
VERSION     WP_258104218.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 785)
  AUTHORS   Larsbrink,J., Rogers,T.E., Hemsworth,G.R., McKee,L.S., Tauzin,A.S.,
            Spadiut,O., Klinter,S., Pudlo,N.A., Urs,K., Koropatkin,N.M.,
            Creagh,A.L., Haynes,C.A., Kelly,A.G., Cederholm,S.N., Davies,G.J.,
            Martens,E.C. and Brumer,H.
  TITLE     A discrete genetic locus confers xyloglucan metabolism in select
            human gut Bacteroidetes
  JOURNAL   Nature 506 (7489), 498-502 (2014)
   PUBMED   24463512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025680.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14322.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..785
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /calculated_mol_wt=86747
     Region          68..>262
                     /region_name="SusD"
                     /note="starch binding outer membrane protein SusD;
                     cl21747"
                     /db_xref="CDD:451378"
     Region          <544..>600
                     /region_name="SusD_RagB"
                     /note="SusD family; pfam07980"
                     /db_xref="CDD:429768"
ORIGIN      
        1 mkklsiiili aglflgckdd vlketpvtvl nndfyttidg lnglvngtyq vfrfkpdynp
       61 gnflfgasnd vevflnndnq grissslyqp dswgpaaega qvitdqinsl lgttsggvse
      121 gmypvitrcn iflenyangs aelqdvmaea kgemlfiray ayylltnvlg dvplilntpk
      181 gystifyfpk spiedvykvm isdlrqavdi lpeeaaqlgr vskpaaahll akiylnraqa
      241 anwegaethl dmlykgnvst dldssifyst mvidqkqget afgglapnfg dlwqvdpndp
      301 snllkdhtrd lvseiilstq yegtgqfngr yggsqlihmy dqdytvltcg vsrndmtypr
      361 pfravgpndw aydmytdran dsrwaktfih eyaantdign lnwtdgtawy ynnnlkskyp
      421 dryegndvid gatkieleer tlvfienskd epldslwvas qpylllarwi agspngagyf
      481 drdgggnitg lkagitidpd npvvtdvsnr evryrvvpag ggnisrygcd aepssslayl
      541 spskwwdknr glgvndrgpg sidiplirla etyliraeal grrdgptaai pdlnvirsra
      601 ayhpgenrse ilatiepgvl tgrwnipage tvapyavgad syteieitge ewgtgakaql
      661 enypptatte mdrfihfiyn ekarefifeq mitedlhnag ilydrvyyrd yygapssstg
      721 tvdypfpvdp vdqggivgat gtgrglfdkr htfkawpiry lnlltdeiga pldgnaiday
      781 qnpgy
//
LOCUS       WP_258104233             727 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104233
VERSION     WP_258104233.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 727)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..727
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=82444
     Region          11..>77
                     /region_name="DUF6491"
                     /note="Family of unknown function (DUF6491); pfam20101"
                     /db_xref="CDD:437933"
     Region          64..324
                     /region_name="GH43_Bt3655-like"
                     /note="Glycosyl hydrolase family 43 protein such as
                     Bacteroides thetaiotaomicron VPI-5482 arabinofuranosidase
                     Bt3655; cd08983"
                     /db_xref="CDD:350097"
     Region          419..701
                     /region_name="GH43_BT3675-like"
                     /note="Glycosyl hydrolase family 43 protein such as
                     Bacteroides thetaiotaomicron VPI-5482
                     alpha-L-arabinofuranosidases (BT3675;BT_3675); cd18828"
                     /db_xref="CDD:350149"
ORIGIN      
        1 mirrvvisql mimvvltsll lsgcastssk neyvgylfay ftgngpgeeq vryalstdgf
       61 nyfalnsndp vidsriisar ggvrdphilr gedgmfymvl tdlyvpemgw entamimlks
      121 kdlinwthsi idipktysen fgdvrrvwap qtnydtstgk ymlywsmlqp gtpdiiyyay
      181 ansdftgleg epkqllykdg acidgdivlk dgkyhlffkn edegakgiml atsdkinegy
      241 evqegyvdqt ddavegsgtf klinsdkyil mydvytsgky qfcetddlkn fkvidenism
      301 nfhprhgsii pitqeemnrl lskwgkvigl vegtsndqvk sqnieiresl itlpvmpgtd
      361 vssfdpqlnl fsevkvspig pqdfskgavk ysfqfgeqtr tvdvvvreqa npvlngyyad
      421 peiiysereq kyylyptsdg fnwwsgkhfe vfesadmvkw tnkgkildlt tdvewadrna
      481 wapcaiekkv gdsykyyyyf saaqkigvav adnpwgpfvd tgkplidfrp egvkggqeid
      541 pdvfydkqtg kyylywgngy magvelnddm vsinkstlkv mtpdqtfreg tevffrngky
      601 yflwseddtr spnykvryat adsplgtlni pqwnvviekd plkaiygtgh nsvvyskakd
      661 qwyivyhrfn rpkgikmgda agynrevcid elnfddngyi krtqptvkgt inslpaiska
      721 eevasvn
//
LOCUS       WP_258104240            1117 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104240
VERSION     WP_258104240.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 1117)
  AUTHORS   Sakamoto,Y., Nakade,K. and Konno,N.
  TITLE     Endo-beta-1,3-glucanase GLU1, from the fruiting body of Lentinula
            edodes, belongs to a new glycoside hydrolase family
  JOURNAL   Appl Environ Microbiol 77 (23), 8350-8354 (2011)
   PUBMED   21965406
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023218.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11790.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1117
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..1117
                     /product="glycosyl hydrolase"
                     /GO_function="GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /calculated_mol_wt=124310
     Region          64..224
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          616..815
                     /region_name="Glycosyl hydrolases"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     cl23725"
                     /db_xref="CDD:474034"
     Region          1053..1116
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     cl46851"
                     /db_xref="CDD:481191"
ORIGIN      
        1 mriitliils gvlgvtsmdl ihaqtlkhsy tfdegdaqdi ignadgiihg givengrysa
       61 tlqgnyielp adkininqyt qasfeamiqt psgnawntml fyfgrttgen ygadylffsp
      121 knggttkvgi sclnssspwt aetnitasvl ednelhhivl tlnnssltly idgsqtgsvs
      181 lssenkleni snlsaylckg gytddptwlg sidqfniyeg ilsapiisnk alsyfsspel
      241 iattygnlds yddkiknlsp itvqdfldgl tisknaeadi ldsnqnkitd lttvvnsdmt
      301 lritgsavkl yqlvvrpisd dnyvkwafna eilhgpsiin dlyndltasq flsgvkipsf
      361 ssirllngag telepshili tkdkveitae ngdiktyqff vgsvpmtdti vsnsqktfdq
      421 lplgkyelqd niewyildda npipgsklnl tseniwiyfp nvlpqtlydk yfpnitingq
      481 aavpdqnvrl vqhgvgsvii ghpstyqplt vysgasltgd skklslytyy keadaytasp
      541 reslgtfdnn iesfllkkgy masfsentdg tgaskvyiad eedivintme tglvntvsfi
      601 rvfpwrwvnr kgyvgnawdg qntssqwvyc hcdqageess lnveyvplkh npgwpglpyt
      661 kknvtnllyy nepdnsvddg ystvadaisn ypallatglr mvspaptdgg vwwledfltq
      721 ckannyrvda vaihfylgcq stqqfyhfln gvhevskvyd pnglpvwite fnngcnwsda
      781 gckpttyeqq eavikdwvdm ledapfvery siwpgceqyq qfwmwdgdvg qwvmtpagey
      841 ysnkrsglay tssaqhdyhy fpenndsevi ssklswvpkp astgqqlyfg mtsppeyftq
      901 leghigkidv gplefnqkyy wrideyqsdg tiitgqelef ttynlpkasd pipsdgstlk
      961 qgnhlgwssd pfgtethqvy lsrspnnmfl eatfpdvtts fvpdaltage tyywrvdevv
     1021 tlsdgrevtg kgdiwsftat lplnnhqpsi itvypnpard llyingipen trievydlig
     1081 hrvisehyeg qisisqlkpg iyilhlggae askfive
//
LOCUS       WP_258104242             406 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5000 domain-containing lipoprotein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104242
VERSION     WP_258104242.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16391.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..406
                     /product="DUF5000 domain-containing lipoprotein"
                     /calculated_mol_wt=45612
     Region          19..122
                     /region_name="DUF4959"
                     /note="Domain of unknown function (DUF4959); pfam16323"
                     /db_xref="CDD:465093"
     Region          125..226
                     /region_name="DUF5126"
                     /note="Domain of unknown function (DUF5126); pfam17166"
                     /db_xref="CDD:465365"
     Region          254..403
                     /region_name="Sad1_UNC"
                     /note="Sad1 / UNC-like C-terminal; cl23730"
                     /db_xref="CDD:474037"
ORIGIN      
        1 mksnylikll llvgvaflfs ceegefrepl eksdavpqnv seitftslag avkmsftlpd
       61 dpnvshvsvk yettsgierv ltssvysnsi ildgfadlee heieiytvsk gnvksevitk
      121 svsaleapiw kvqrelefpv qfggfniegt nadssivsvl imeknefdef evsitksfat
      181 alkkierkir gldtsvyvyk vfvmdkwkns tdtttieikp lfetrmlken ykyyplsgda
      241 pqvsnnpvgp eaafdgrngw gfvsfttdkq pelgphmlty dvgeefrlsr wwyqpypefg
      301 wdpaliqyyy latlkefeiy gstapsvsgd lddswtlmgs fviekpsgag ygkdtpedia
      361 taeaglsfef spdlpkvryi rirclenfvg gpyfnigeme ffgdpr
//
LOCUS       WP_258104245            1221 aa            linear   BCT 02-MAR-2025
DEFINITION  LamG-like jellyroll fold domain-containing protein [Marinoscillum
            sp. MHG1-6].
ACCESSION   WP_258104245
VERSION     WP_258104245.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 1221)
  AUTHORS   Thompson,D., Pepys,M.B. and Wood,S.P.
  TITLE     The physiological structure of human C-reactive protein and its
            complex with phosphocholine
  JOURNAL   Structure 7 (2), 169-177 (1999)
   PUBMED   10368284
REFERENCE   2  (residues 1 to 1221)
  AUTHORS   Beckmann,G., Hanke,J., Bork,P. and Reich,J.G.
  TITLE     Merging extracellular domains: fold prediction for laminin G-like
            and amino-terminal thrombospondin-like modules based on homology to
            pentraxins
  JOURNAL   J Mol Biol 275 (5), 725-730 (1998)
   PUBMED   9480764
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024777.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13385.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1221
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..1221
                     /product="LamG-like jellyroll fold domain-containing
                     protein"
                     /calculated_mol_wt=128263
     Region          240..262
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275365"
     Region          283..366
                     /region_name="Cadherin-like"
                     /note="Cadherin-like beta sandwich domain; pfam12733"
                     /db_xref="CDD:403821"
     Region          432..573
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          <574..595
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          616..695
                     /region_name="Cadherin-like"
                     /note="Cadherin-like beta sandwich domain; pfam12733"
                     /db_xref="CDD:403821"
     Region          740..892
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          950..981
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          950..981
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275366"
     Region          1042..1109
                     /region_name="ASH"
                     /note="Abnormal spindle-like microcephaly-assoc'd,
                     ASPM-SPD-2-Hydin; pfam15780"
                     /db_xref="CDD:464865"
     Region          1149..1219
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     pfam18962"
                     /db_xref="CDD:436869"
ORIGIN      
        1 mkqiqlkclk wlqylliavp flvaehaysq atkihsytfe gtggtelqdg tgsadltlea
       61 gasisggalv lgtagdyaal dakaidinqy savsfeahii agngvntsgn htlfyfgnnd
      121 pandwkgydh vylqaargta asyaaistsg nvgdpwnyed avtgsfsmdd gnehhlivil
      181 tetsisyfvd svnvgtkvye kgssiaalsd slawigksgy kndptylgsv lefniyngsl
      241 dsdgdgvldw kdncvdvans dqadtdgdgt gdkcdpdfaa anlsdlstdl gelipafdpe
      301 iynytvgnlp rgtmdvtlsa taelgtsvvt ytvsgdgvvd vssgpvtevi tvtddaatdk
      361 tytisvqpia kihaydfega avtdaigsad gtlegsatis ggslvlsgeg dfaaldadai
      421 ginqyhavsi eahvtaggaq lngsnksvfy fgnsenvgwd kgfdhfflqa inggtnsrfa
      481 lstandnepw ngetgingna laanteyhlv tiltatnisy yvdsvlvgkt aitnenalad
      541 vsdslvwlgn sgyvgdgtwl gsihefniys gsldndndgi ldlvdncpdv ananqadvdg
      601 dgigntcded fnaavlsdls vdagkitpaf dpfayeysvf vpfgvtevsi tatpssgths
      661 vvgdstidvs sgnvtvsviv seegldtsty niqftpvilk hsytfeeqpv dgfvsdqagd
      721 ldgeilgate ikdgalvssg gtdglsldgv alglknydai tvetyvtgse antgfhmlny
      781 fggvnsdgaw fvqparendk avaeflgtwi eadseyvdtl yhhfvstltn demtlyvdgy
      841 ligtavpsgt isqikttyaf lcesgwsqdn swagqvhewn iyngvmdsas vaarvnkfdp
      901 dedgilnawd ddddndgqld kyelaacast dpldassfat ddftngvags ngipdclevd
      961 tdsdgiqdwe dncpetanad qadsdgdgig dvcdddrdgd giandvdqcp dqanvgdtdn
     1021 dglddacdpl iatvdlsdee ntgtiqfgdv avssdlakll yisnggsdam svteitapag
     1081 ftldktsatv sgpglaivtv tfapteevty sgyivvkada gtdsiavngk gvtaalgsea
     1141 anlglkigpn piqdefmvdw slsefnnpsi rvmnidgkvi weqtslsgqy vnidlsgtss
     1201 gmffleikse enthlfklik e
//
LOCUS       WP_258104261            1348 aa            linear   BCT 02-MAR-2025
DEFINITION  FG-GAP-like repeat-containing protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104261
VERSION     WP_258104261.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13517.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1348
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..1348
                     /product="FG-GAP-like repeat-containing protein"
                     /calculated_mol_wt=150338
     Region          64..146
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          135..198
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          241..305
                     /region_name="FG-GAP_3"
                     /note="FG-GAP-like repeat; pfam13517"
                     /db_xref="CDD:433275"
     Region          452..516
                     /region_name="UnbV_ASPIC"
                     /note="ASPIC and UnbV; pfam07593"
                     /db_xref="CDD:429555"
     Region          562..631
                     /region_name="PKD_6"
                     /note="PKD-like domain; pfam19408"
                     /db_xref="CDD:466068"
     Region          978..1254
                     /region_name="PAP2_haloperoxidase"
                     /note="PAP2, haloperoxidase_like subfamily.
                     Haloperoxidases catalyze the oxidation of halides such as
                     bromide or chloride by hydrogen peroxide, which results in
                     subsequent halogenation of organic substrates, or
                     halide-assisted disproportionation of hydrogen...;
                     cd03398"
                     /db_xref="CDD:239492"
     Site            order(1055,1062,1163..1165,1228,1234,1238)
                     /site_type="active"
                     /db_xref="CDD:239492"
     Region          1276..1348
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 mkqvfaatrs srksngrkin lciclvlfvp wiagtkvlaq gfreihtqsg lsgsfnnngv
       61 svadydrdgd ldlfvvsrwk sgngaatsql yqnnndgtft nvtvesgins thdytgeyii
      121 gfsgfgermg aswgdydndg fpdlflsnvy yfelyhnngn gtftdvtaea nlpltnscyi
      181 tgatwfdfnn dsyldlyvtk lyscsekffy knngdgsfse ysenvgltgs gsaswmavpw
      241 dinkdgfqdl yivtdfdlpn qlyindsgtf fidsaefygl kdinkegmgf tlgdynndel
      301 ldfyittide nslfknlgnn vyadvavglg vdttkwswgt qffdydndld ldlvvvngyn
      361 ikyrnaffen tlesgiegff nratefgmde lsssngvvtf dydndgdldf ligrtgdhle
      421 lfenqldldp sgsknwvqls legttsnrda igtlikvrvg dtvltryyng lalmaqnlqp
      481 vhfgladven idqltikwps gikeeytnlp vnsflkfteg ssydtldlts nkisgcmdpn
      541 scnynpaatq ddggcgylks ksitgginve vlneadysyp etsghtydws vtngvilegq
      601 gtasikvewd iadkgtvtvt emgncsslpv tlevnlsgql alesksiarl wneallaair
      661 kdyarptvha rnlfhasvam ydawalfnes atpyligkql ynynnqfngf esevddstam
      721 staisfaayr llthrfknsp nqavtqqrfd dlmtllgldk sfkstnyssg dpaalgnfig
      781 qslieygfid ranetsgyan qyyqprnepl vpvlpgnpni idpnhwqplt ldvfidqagn
      841 vvegktpsfl spewgvvypf slskadastf srdggeyvvy hdpgpppshr qqkiaagemd
      901 lykwnfllvs mwsshldpyd gvmwevspig ignidfdqlp tsivnhsefy dlerggdigk
      961 grsvnpitsq pyisqmvprg dytrvlaefw adgpdsetpp ghwfvilnyv tdhpqfirkf
     1021 kgegeivdll ewdvkayftl ggtmhdaaiv awgvkgwydf irpisairym aeygqstdit
     1081 lsnyhqngip lvpgfvevvk sgdslagvgn enlgkiklya wrgheyvqdp nvdeagvgwi
     1141 laenwwpyqr psfvtppfag yvsghstysr aaaevmtllt gseyfpggmg efvakknefl
     1201 vfeegpsqdv hlqwatyrda sdqcslsriw ggihppaddi pgrilgheig ieafvmaesy
     1261 fnnytlsnel medvvvypvp trdsriyirn vsedqsfkvf dvqghemsvi ekgydtfsrt
     1321 mtlrldeemp nglyilqsgs erwkilir
//
LOCUS       WP_258104278             241 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104278
VERSION     WP_258104278.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 241)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024091.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12679.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..241
                     /product="ABC transporter permease subunit"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=26500
     Region          4..237
                     /region_name="ABC2_membrane"
                     /note="ABC-2 type transporter; cl21474"
                     /db_xref="CDD:473876"
ORIGIN      
        1 mskiwiitrr elasffdsli ayvmiilflg lsglftwlvg snmffinqas lqvffsiayw
       61 slfffipait mrmiaeenra gtiellitka vsdsqivwgk flaclllvai alvctlpyyi
      121 tvsnlgnidd gaviggymgl lflsasyisi glfassvtqn qivafllalf igiffqmvfd
      181 avggsirgts geilnylsms shyesisrgv vdsrdlvyfa siiglgalls qimlskrnwq
      241 s
//
LOCUS       WP_258104279             307 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Marinoscillum sp.
            MHG1-6].
ACCESSION   WP_258104279
VERSION     WP_258104279.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 307)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 307)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 307)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..307
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=34214
     Region          1..306
                     /region_name="GldA_ABC_ATP"
                     /note="gliding motility-associated ABC transporter
                     ATP-binding subunit GldA; TIGR03522"
                     /db_xref="CDD:132561"
ORIGIN      
        1 msiivenltk kygeqkavnd isfeiktgev vgflgpngag ksttmkiitc fmapssgdvk
       61 ldghsihtdq elikkkigyl pennplyqdm pivdylrfsa evqgveknli pgrigemiek
      121 cgldqekhkn inelskgyrq rvglaqamih dpevlildep ttgldpnqiv eirklikelg
      181 kektvilssh ilseveatcd riliinrgri vadgtsdtlr sqaqgqellk inieaeaakv
      241 ekailelssv ekvtslngke gwfnvqskpd mssrkeifdl cvknkwylme msgletrled
      301 vfqkltk
//
LOCUS       WP_258104346             454 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104346
VERSION     WP_258104346.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 454)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..454
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=50267
     Region          4..452
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     Site            order(126..130,138,153,155..156,202..205,208,211..212,
                     226..228,261,358,360,386,424)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143395"
     Site            order(130,226,258,261)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143395"
ORIGIN      
        1 mniinpsngr iienlkeddl nsvhkklvhl ratqkvwstr tvkerlavie kfgelvkqnr
       61 eelaqiltse tgkpirqarg evmgslnrit hlksiaekwl seeqivkegg tlesiryepl
      121 gvianisawn fpynvgynvf lyalvagngv fykpseyatm tglkfktlle eaglpeglfe
      181 vvigkgdvgq llleedidgy fftgsyktgv hiakevaskl vpvqlelggk dplyvmddvp
      241 dikvaaanaa egafynngqs ccaverlyvh ekiydefvsy fvdevkgymv gdplqentfi
      301 gpltrepqiq viidqvkdav dkgaqlvlgg drvegsgyym aptiltnvnh dmdvmrdesf
      361 gpiigiqkva sdeealelmn dteygltaaa fsvnearann llekvnvgtv ywnccdrvsp
      421 fvpwsgrkns glgatlsymg iraftqpkay hirk
//
LOCUS       WP_258103479             874 aa            linear   BCT 02-MAR-2025
DEFINITION  BNR-4 repeat-containing protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258103479
VERSION     WP_258103479.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 874)
  AUTHORS   Roggentin,P., Rothe,B., Kaper,J.B., Galen,J., Lawrisuk,L.,
            Vimr,E.R. and Schauer,R.
  TITLE     Conserved sequences in bacterial and viral sialidases
  JOURNAL   Glycoconj J 6 (3), 349-353 (1989)
   PUBMED   2562507
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027224.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15892.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..874
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..874
                     /product="BNR-4 repeat-containing protein"
                     /calculated_mol_wt=98746
     Region          52..321
                     /region_name="BNR_4"
                     /note="BNR repeat-containing family member; pfam15892"
                     /db_xref="CDD:435002"
     Region          445..571
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cd00161"
                     /db_xref="CDD:467293"
     Site            order(502..503,513,515,522..523)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(547..549,562,564,571)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
ORIGIN      
        1 mrkligafif iigaiwplgl saqvkvtelv dfarddewrg npslasdgen vyvlftdvdr
       61 kgsvckysmg sgkvewtkgi fetigdhdps hndaaiavdg dgyihcwigm hndnikyyrs
      121 vkprdislfq dvsfempnhd karatypwat tsangdvfli frralganne wqdlyhwhna
      181 ekrwtrriil gkfgdsayms smcadsensi hivtawsdfh frdnhyqrgs yirydvnadk
      241 fykadgqevv dlpikhdglg vdlfyenqnp wgeieeiqtp ritvdeqgnp iisypytkdd
      301 ggfwdynvar wedgkwnhkt vyrsgtrygr ppltysnglm rmyctdvseq avdvvlnlks
      361 ksfkvfqnav ssdyvfakmv tsparvnsgk riatdflisr rhlyqieydl kklkkwspak
      421 seqrpenlls rvlsgevksg fegkgdylii ckngykaaad vpgeklakqt iltgeenqiw
      481 kieaisenkf sivnkssgea lcligddtwi daetrplsds enhqwmikhs gfgylnivnn
      541 englaltpgg nhgstdvman itgqvlnssy nafnwlmvpv dqqgspfpae vindeslgri
      601 kagnlsveee vgffgsgdyl imdkersevl svkpgtvdle vqafngeinq lwminhtrrq
      661 sfpviknkmi veklivengn lqmacvaadt skvdslsidk sgklvfgasg enagsefydi
      721 fndkewyiyy ygsripvpta iaggdfqgey liydsisggv lsrgledpgl kiglfygyvy
      781 hnsvweiryq gdnqyflink enqellyydq rnkvcrtksy rsgegflwei ipqpdgsysl
      841 nnvstnqslv vfengsteqv glgeprmasw kirk
//
LOCUS       WP_258104324             334 aa            linear   BCT 02-MAR-2025
DEFINITION  homocysteine S-methyltransferase family protein [Marinoscillum sp.
            MHG1-6].
ACCESSION   WP_258104324
VERSION     WP_258104324.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 334)
  AUTHORS   Thanbichler,M., Neuhierl,B. and Bock,A.
  TITLE     S-methylmethionine metabolism in Escherichia coli
  JOURNAL   J Bacteriol 181 (2), 662-665 (1999)
   PUBMED   9882684
REFERENCE   2  (residues 1 to 334)
  AUTHORS   Chen,L.H., Liu,M.L., Hwang,H.Y., Chen,L.S., Korenberg,J. and
            Shane,B.
  TITLE     Human methionine synthase. cDNA cloning, gene localization, and
            expression
  JOURNAL   J Biol Chem 272 (6), 3628-3634 (1997)
   PUBMED   9013615
REFERENCE   3  (residues 1 to 334)
  AUTHORS   Garrow,T.A.
  TITLE     Purification, kinetic properties, and cDNA cloning of mammalian
            betaine-homocysteine methyltransferase
  JOURNAL   J Biol Chem 271 (37), 22831-22838 (1996)
   PUBMED   8798461
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014615.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02574.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..334
                     /product="homocysteine S-methyltransferase family protein"
                     /calculated_mol_wt=36597
     Region          4..>328
                     /region_name="metH"
                     /note="B12-dependent methionine synthase; Provisional;
                     cl46890"
                     /db_xref="CDD:481230"
ORIGIN      
        1 msklkeiakq rilvldgamg tmiqryklee edfrnealkd hpkplkgnnd llaltrpdvl
       61 seihaayfea gadiaetntf ssttiaqady glesyvyqln yesariarev adkftadnpd
      121 kprfvagsig ptnrtasisp dvndpgyrav tfedlktayy eqakalldgg vdaflvetvf
      181 dtlnakaalv aiddlntern vnvpvmvsgt itdasgrtls gqtteaflis ishmdllsvg
      241 lncalgasel rpylqvlser cdfmvsahpn aglpnefgey dqspeemgeq ikefmeqgwl
      301 nivggccgtt pdhiheiarl anqfqprike ayvd
//
LOCUS       WP_258104373             142 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104373
VERSION     WP_258104373.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 142)
  AUTHORS   Ronning,D.R., Guynet,C., Ton-Hoang,B., Perez,Z.N., Ghirlando,R.,
            Chandler,M. and Dyda,F.
  TITLE     Active site sharing and subterminal hairpin recognition in a new
            class of DNA transposases
  JOURNAL   Mol Cell 20 (1), 143-154 (2005)
   PUBMED   16209952
REFERENCE   2  (residues 1 to 142)
  AUTHORS   Brynestad,S., Synstad,B. and Granum,P.E.
  TITLE     The Clostridium perfringens enterotoxin gene is on a transposable
            element in type A human food poisoning strains
  JOURNAL   Microbiology (Reading) 143 (Pt 7), 2109-2115 (1997)
   PUBMED   9245800
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013921.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01797.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..142
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=16578
     Region          1..>89
                     /region_name="RAYT"
                     /note="REP element-mobilizing transposase RayT [Mobilome:
                     prophages, transposons]; COG1943"
                     /db_xref="CDD:441546"
ORIGIN      
        1 msaykfddpd glyfvtftvv ewvdvftred yvmiilgslr hcqkekglii hawvimsnhl
       61 hlvisrkegv nnsfsdivrd fkkftssqil asiqsnsfes rrgwmlwlfq sagaknsnnk
      121 nyqfwkhdsh sellfsnkfm dq
//
LOCUS       WP_258104416             339 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-binding dehydrogenase [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104416
VERSION     WP_258104416.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00107.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..339
                     /product="zinc-binding dehydrogenase"
                     /calculated_mol_wt=36511
     Region          2..335
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
     Site            order(41..43,46,123,127,148..151,153..154,172..173,176,
                     191,215..216,237..238,277..279)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176178"
ORIGIN      
        1 mkayylikng ssdqafelre tetpkpnage vlvksqgfgl nfadvmarlg iykecpplpt
       61 vvgyenvghv vavgegvtsv kegdrvlaft rfggyadhvi tpvlavakip eewsvgiata
      121 latqyitayf aieeavklhr gdhvlvhaaa ggvgtalvqf lkakgciifg tasaskheyl
      181 kslgvdypid yrdndyalei eklgfkgkid atynpiggdy vkrdyqllns ggrvvlfgas
      241 klteakgnii kmlklvfgfg fwspikfvsq sksiigvnml higdnkpall sqclqqvvak
      301 aangdiqptv gkefehsela aahdflasrk sigkiainw
//
LOCUS       WP_258104432             554 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104432
VERSION     WP_258104432.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 554)
  AUTHORS   Brunecky,R., Alahuhta,M., Bomble,Y.J., Xu,Q., Baker,J.O.,
            Ding,S.Y., Himmel,M.E. and Lunin,V.V.
  TITLE     Structure and function of the Clostridium thermocellum
            cellobiohydrolase A X1-module repeat: enhancement through
            stabilization of the CbhA complex
  JOURNAL   Acta Crystallogr D Biol Crystallogr 68 (Pt 3), 292-299 (2012)
   PUBMED   22349231
REFERENCE   2  (residues 1 to 554)
  AUTHORS   Le Nours,J., Anderson,L., Stoll,D., Stalbrand,H. and Lo Leggio,L.
  TITLE     The structure and characterization of a modular
            endo-beta-1,4-mannanase from Cellulomonas fimi
  JOURNAL   Biochemistry 44 (38), 12700-12708 (2005)
   PUBMED   16171384
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037015.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17957.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..554
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=59220
     Region          64..251
                     /region_name="Alginate_lyase2"
                     /note="Alginate lyase; cl21738"
                     /db_xref="CDD:451375"
     Region          264..329
                     /region_name="Big_7"
                     /note="Bacterial Ig domain; pfam17957"
                     /db_xref="CDD:436171"
     Region          476..552
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     cl46851"
                     /db_xref="CDD:481191"
ORIGIN      
        1 mknpvlylpq qysygnrlkk krpfsflkla cliffiqltt lavsqpysyp yeiprfqdfm
       61 gecklqapts staattaeli agytsswfyv advdkvafnq sgyanrtelr dlrnwlvsdg
      121 drslhgrfnv veqtcdqvtl mqihddanag ngpnkpllri yrhlvksptn hlwaavktda
      181 tgantthidl glnpegyvnc dvkiiggymi idvdgvekvn mdvsfwtwps ywkagvylqt
      241 dgdatayfdd lytgtpsgni ppsvsitapv ngasfadgen vtisadatds dgfvdqveff
      301 vdgnsvgvdt sspysinwti gvgsyditav atdnelattt sssvtitgnt isemyvssit
      361 tgtqnagqgn kygtasvtil dnagapvvga svtgtfsgtf netvssitgg ngvvdlitst
      421 takggvmvdl cvddvthssl aynstlniit ctgssarssg siisesldag kvavglypnp
      481 attsliislt ldeeshfsgn vigldgkvls tirhqvlsvg shevavdlah lnkgiyfiey
      541 tlngdkrisr iikq
//
LOCUS       WP_258104438             862 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104438
VERSION     WP_258104438.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 862)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 862)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 862)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 862)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..862
                     /product="ATP-binding protein"
                     /calculated_mol_wt=98408
     Region          40..>117
                     /region_name="PilJ"
                     /note="Type IV pili methyl-accepting chemotaxis transducer
                     N-term; pfam13675"
                     /db_xref="CDD:433397"
     Region          227..706
                     /region_name="COG4251"
                     /note="Bacteriophytochrome (light-regulated signal
                     transduction histidine kinase) [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443393"
     Region          <468..851
                     /region_name="PRK11107"
                     /note="hybrid sensory histidine kinase BarA; Provisional"
                     /db_xref="CDD:236848"
ORIGIN      
        1 msyqkvrfkl liffvlgvca viftvtvlnt qmshyiakhk yvaeliniag rqrmlsqnia
       61 kntaliisgn kttasldsla elldrshyyl syrkdtldms svqkhrfdsl fnaitphftl
      121 isqvsddlin qndsvkaavf esvifsesrf lplmdaitke fevlarnkld dvnqhtlwsn
      181 vlitfavfis glivflvtak svklysnqlr niqdqlksav setntkiekl efltsaikvg
      241 vweyyradds ekwsdelyni lgyqtdelkg tfseflerth pddqqkllda sdasrrtgip
      301 stieirvltk hngykwveat gnvrrdelgr tslimggvid ihgrkmlenq lkvfvenapa
      361 aiamlnknme ytaisnrwit ayrlegrlli gkshyeifpe isdewkeihq rclkgsvekr
      421 dvdrfdrang etqwvkwevr pwfisdneig giimftedit qeiereeelk kakdqaelas
      481 ktkeeflatm sheirtplna vsglsqills dtpkpeqidn lnllkfsadn llnlindild
      541 iskiesgkla levrafdfky lvqnvkrsld frarenivev vqeydkslpe tfigdatrvt
      601 qiiynlagna ikftrkgkvf isvtklsedd kqctmrvsik dngigisqen qekifesftq
      661 aeagttrqyg gtglglyitr rllqmmdsei qliselgqgs efffdltltk snekidittd
      721 leenvlpers rnmkilvaed nkanqliiqt llkkagvqft ivsdgkeave kaktknfdli
      781 lmdlqmpimg gfeatyeirk etdtyfqrlp iialtadafs nikekaeaig mngyltkpyn
      841 isdlyhlidk ygklnrneke iy
//
LOCUS       WP_258104548             382 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA dehydrogenase family protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104548
VERSION     WP_258104548.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 382)
  AUTHORS   Dym,O. and Eisenberg,D.
  TITLE     Sequence-structure analysis of FAD-containing proteins
  JOURNAL   Protein Sci 10 (9), 1712-1728 (2001)
   PUBMED   11514662
REFERENCE   2  (residues 1 to 382)
  AUTHORS   Djordjevic,S., Pace,C.P., Stankovich,M.T. and Kim,J.J.
  TITLE     Three-dimensional structure of butyryl-CoA dehydrogenase from
            Megasphaera elsdenii
  JOURNAL   Biochemistry 34 (7), 2163-2171 (1995)
   PUBMED   7857927
REFERENCE   3  (residues 1 to 382)
  AUTHORS   Kim,J.J., Wang,M. and Paschke,R.
  TITLE     Crystal structures of medium-chain acyl-CoA dehydrogenase from pig
            liver mitochondria with and without substrate
  JOURNAL   Proc Natl Acad Sci U S A 90 (16), 7523-7527 (1993)
   PUBMED   8356049
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012656.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00441.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..382
                     /product="acyl-CoA dehydrogenase family protein"
                     /GO_function="GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /calculated_mol_wt=42462
     Region          7..382
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(93,123,125,156,158,364..366,368,370)
                     /site_type="active"
                     /db_xref="CDD:173847"
ORIGIN      
        1 mdiycneqhd mirqtvrefa emeiqpkaqa lddkeefspe ltrkigeigl fgmlvpnkyg
       61 gqgmdvlsyi iaveelarvd gsqaatvaah nslgigpilk fgsreqkeky lpelctgehl
      121 wafgltetea gsdsrgsktn aklvkgewvi ngsktfitng ssdmnigvtv qaitnvhsdg
      181 rkeistiive rgtegftsqt mhgkmmwras dtsqlffddc kvprknilgk rgngskimls
      241 tldsgrlsia amglgcaqga yeralayske rkqfgrpiar fqvisfklad mamkielarn
      301 llykacwlkq krkpfgmeaa maklycseia kevadeavqi hggyglmkey dverfyrdqr
      361 llqigegtse iqrlviarqi lk
//
LOCUS       WP_258104552             640 aa            linear   BCT 02-MAR-2025
DEFINITION  OmpA family protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104552
VERSION     WP_258104552.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012894.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00691.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..640
                     /product="OmpA family protein"
                     /calculated_mol_wt=70862
     Region          <27..142
                     /region_name="NlpI"
                     /note="Lipoprotein NlpI, contains TPR repeats [Cell
                     wall/membrane/envelope biogenesis]; COG4785"
                     /db_xref="CDD:443815"
     Site            order(27..28,31..32,34,58,61..62,65..66,68..69,92,96..97,
                     100..101,104)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          27..51
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          56..86
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          91..115
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          157..318
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
     Region          259..437
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
     Region          351..639
                     /region_name="OmpA"
                     /note="Outer membrane protein OmpA and related
                     peptidoglycan-associated (lipo)proteins [Cell
                     wall/membrane/envelope biogenesis]; COG2885"
                     /db_xref="CDD:442131"
ORIGIN      
        1 mktqlaifsf lmllvgsvcf aqgqeafnkg meyykqyrld eaiqkfqeat rynqrdvksf
       61 yflgmacnyk gryedaakaf emvakinpny dytfyyeask plialgrfsd aqwclsnymq
      121 rlpkgpnttm nehmaknrve yatkspkire qattmdtpre vsainssygd ympqvsptgt
      181 klyftsvrkg gfdyrsdttq tahwgedlyv stmtdgswgv pellpqplns lrddfgsaft
      241 gdgqtmvyvr cgdekqgvgn cdlyitqlng tewseptnmg nvinssdwds qptissdgtr
      301 iiftsarsgg yggsdlymse knhlgdwgip qnlgstvntp lnekspylap dgktlyystd
      361 ghpgygnadi fycvfengkw skpvnlgapv nssgddtnfs isaegigyfa ssridpgnyd
      421 iyqvelpdhl kpkptvviqg ivsnsetnep lgavvliedi nsgeliaink snsvtgeyli
      481 vlpagrsysv stnskgfffy sqsfdipsda nyeeismdis lepikkgtkv vlnniffesg
      541 katlkpisyv elnkavtlle enatmvieig ghtdnvgsde lnlklseqra kavvdymvla
      601 gvpaerlkyk gygettpiad nstaegkakn rrtefeivef
//
LOCUS       WP_258104597             344 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104597
VERSION     WP_258104597.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 344)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..344
                     /product="AMP-binding protein"
                     /calculated_mol_wt=38254
     Region          42..340
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(44,154..155,176..181,230,242,245,256,330)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(44,85..86,130,132..133,136,154..155,176..181,230,
                     242,245,253..256,311)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(44..49,51..52)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(85,132..133,136,154,253..255,311)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
ORIGIN      
        1 mqlnlngrev ildkvyddlt kaentvfqii kdwlngkalf sfttsgstgp qksieihrsi
       61 leysasctld kldpnrnfks slicinpefi ggfmaivrgv lgghsitfmd pqsnplklvp
      121 nekfdlvsmv piqvetlfre ssellsqvdt viiggakvnq ptlnhirqnt ttrfyhsygm
      181 tetashfalq dlrleevfev igdakigkdh dsclnvkgtv tgqaliqttd lvdiidlkhf
      241 rwlgradnii nsggikispe lvenilqgqi evpffvaglp deklgskvsl iiesnksfdl
      301 gqfdfsklsr yqqpkaiisi pkfvytatek inraetlkrl qfgs
//
LOCUS       WP_258104625              58 aa            linear   BCT 02-MAR-2025
DEFINITION  PLDc N-terminal domain-containing protein [Marinoscillum sp.
            MHG1-6].
ACCESSION   WP_258104625
VERSION     WP_258104625.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024788.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13396.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..58
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..58
                     /product="PLDc N-terminal domain-containing protein"
                     /calculated_mol_wt=6582
ORIGIN      
        1 mntnsllgii allcaiwviy dvwtkqkkms dgskilwtic avifniitai vyyfkkkk
//
LOCUS       WP_258104630             180 aa            linear   BCT 02-MAR-2025
DEFINITION  1-acyl-sn-glycerol-3-phosphate acyltransferase [Marinoscillum sp.
            MHG1-6].
ACCESSION   WP_258104630
VERSION     WP_258104630.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 180)
  AUTHORS   Neuwald,A.F.
  TITLE     Barth syndrome may be due to an acyltransferase deficiency
  JOURNAL   Curr Biol 7 (8), R465-R466 (1997)
   PUBMED   9259571
REFERENCE   2  (residues 1 to 180)
  AUTHORS   Bione,S., D'Adamo,P., Maestrini,E., Gedeon,A.K., Bolhuis,P.A. and
            Toniolo,D.
  TITLE     A novel X-linked gene, G4.5. is responsible for Barth syndrome
  JOURNAL   Nat Genet 12 (4), 385-389 (1996)
   PUBMED   8630491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013702.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01553.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..180
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /GO_function="GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=20889
     Region          5..168
                     /region_name="LPLAT"
                     /note="Lysophospholipid acyltransferases (LPLATs) of
                     glycerophospholipid biosynthesis; cl17185"
                     /db_xref="CDD:473073"
     Site            order(33,36,38,57..60,109..111)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153250"
ORIGIN      
        1 mkyffrfcfw ltgwkiighk ptlnkyvliv aphtsnwdff vglaartieg ihsrflikds
       61 itklpvigql iewlggrgvd rskstrvvdq iaemyskeqe fvmtitpegt rsyspnwktg
      121 fyrlavmvni piqmvgfdyg kkevvfrelf yptgdadrdi eymkayyrti rgkhpekgvk
//
LOCUS       WP_258104646            1079 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104646
VERSION     WP_258104646.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 1079)
  AUTHORS   Das,A.K., Cohen,P.W. and Barford,D.
  TITLE     The structure of the tetratricopeptide repeats of protein
            phosphatase 5: implications for TPR-mediated protein-protein
            interactions
  JOURNAL   EMBO J 17 (5), 1192-1199 (1998)
   PUBMED   9482716
REFERENCE   2  (residues 1 to 1079)
  AUTHORS   Lamb,J.R., Tugendreich,S. and Hieter,P.
  TITLE     Tetratrico peptide repeat interactions: to TPR or not to TPR?
  JOURNAL   Trends Biochem Sci 20 (7), 257-259 (1995)
   PUBMED   7667876
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019339.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07719.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..1079
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=125122
     Region          <29..213
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          59..87
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(95,98..99,102..103,105,129,132..133,136..137,
                     139..140,163,166..167,170..171,174)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          95..122
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          127..157
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <390..489
                     /region_name="YwqK"
                     /note="Antitoxin component YwqK of the YwqJK
                     toxin-antitoxin module [Defense mechanisms]; COG2849"
                     /db_xref="CDD:442097"
     Region          466..611
                     /region_name="YwqK"
                     /note="Antitoxin component YwqK of the YwqJK
                     toxin-antitoxin module [Defense mechanisms]; COG2849"
                     /db_xref="CDD:442097"
     Region          624..776
                     /region_name="YwqK"
                     /note="Antitoxin component YwqK of the YwqJK
                     toxin-antitoxin module [Defense mechanisms]; COG2849"
                     /db_xref="CDD:442097"
     Region          <823..935
                     /region_name="YwqK"
                     /note="Antitoxin component YwqK of the YwqJK
                     toxin-antitoxin module [Defense mechanisms]; COG2849"
                     /db_xref="CDD:442097"
     Region          920..1079
                     /region_name="YwqK"
                     /note="Antitoxin component YwqK of the YwqJK
                     toxin-antitoxin module [Defense mechanisms]; COG2849"
                     /db_xref="CDD:442097"
ORIGIN      
        1 mlncliftil fsvtptfdst eftspaeiie lagdleaqgq yedaialyls iskndtshiq
       61 vmselmdayn aleqydesia iglelkdiks efrkdiyitl gnaflnkgdl eksaeiyreg
      121 lglfpynhvl lyniglyhym kedyqdatry fqkcleiqpf yssahgllay itmlqghrtk
      181 ailgyltyla inpdknstlv flenlvndaa rnegsippit snelfvqyde lsrskaalds
      241 rfnikvnfna sivkqlellf srlkyqentg dfwmdlyvpf yselnkngls tafiyfilqs
      301 tndqgvlnwi dkhsdeksdw idlanaglkq mrgtlpatvl gekndysfwy fnsnilsaig
      361 neadddtrig pwafystngq lnatgrynde gdmigewkyy hdngqlsree yyndegvhik
      421 paqyyhengq lwivapyken qlhdtleyyy ecgqlkellp ykegvqngkg kifhqsgplh
      481 ityeildgef endyiyhyen gqvgnhytyk lgsldgpyks yyingqides geyqmdslhg
      541 ewtgyhqngn lryegtddng krvgnwtfyh sngnikqtet yksgklqgea kaydrqgrlk
      601 ditlynediv igytcfdqyg dtlfhsydpk gnmlitayei tgekkytcql qngkyngsyt
      661 syfkngniyi kgsmknnqfd geyeeyyptg qlkydsyyld gnqhgyfkky ykngqieqeg
      721 wyvddnfeqe wklyhpdgsl devqyyisgk lhgwtqyyap nnklqeeyky dmgtiialre
      781 ydtlgniyhe teyefgtglr tektpsgkti fkadsrcgyv igdfknlyen gkissiypqk
      841 gtlyegdyka yhsngklmtn gpyknnmrhg qwkwysdngk lessydyefn klngltrqyh
      901 yngqldsece qdegsnqgtc kyydhagnlq likvydqdnf vfyinnqtkd tihfkttgef
      961 sletyfdngk pavvqnfnng kydgkclynn lnggksesis fkygdyhgpk ikyytngnvq
     1021 ietpyqydlk hgeekeyfan grlkrvtpyv ndskngyeim ynsngsvksk tyywngeiy
//
LOCUS       WP_258104647             654 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3857 domain-containing protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104647
VERSION     WP_258104647.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024371.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12969.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..654
                     /product="DUF3857 domain-containing protein"
                     /calculated_mol_wt=75136
     Region          <100..184
                     /region_name="DUF3857"
                     /note="Domain of Unknown Function with PDB structure
                     (DUF3857); pfam12969"
                     /db_xref="CDD:432907"
     Region          <281..402
                     /region_name="YebA"
                     /note="Transglutaminase-like enzyme, putative cysteine
                     protease [Posttranslational modification, protein
                     turnover, chaperones]; COG1305"
                     /db_xref="CDD:440916"
ORIGIN      
        1 mvrfiksqsr hifffllcsv hllaqgqmka deeyahfkkl ypndqviylt ksetvnytiv
       61 ndsvkttidv yheilhlgen tagyagekvf sssfsevsnl eaytlvpnkr kyrrieveef
      121 kssydknsyv fyddnkeisf typgvqkgak cilkytktvn dprmigtfff esyipihrav
      181 yevkrdpnis isqhtfnqrk lditvnestt ksgelktsfs vnkidkvkfd vdcpsfsyla
      241 asvycpvssy qkvngesswl isspetlhqw yrtflngiqg tnpevknlig giikdddpvl
      301 ekvrkiyywv qanikyiafe dgmrgfiphp geyviskryg dckdmasaiv smlraadiea
      361 yytwigtrdl pykysetpsp itdnhmiatf ihegkvyyld atgqytpidl ptsmiqgkec
      421 lismgedkfr vetvpvipke tnmmidsvei eiadgnikgt gratlkgysk vfnsysliks
      481 nqtrvenhve qllgkgsnkf eiedfelsdl enlskptvid ysfhiqsyyr aigddiyinl
      541 vldkamteaq ienrtvalen eykyldrhvv rlkipeeytv qklpenqknt neqfgyaisy
      601 eadenyitvt kdvfvdylim hpeafdswnq iiseyakasr qalilslkke asik
//
LOCUS       WP_258104666             439 aa            linear   BCT 02-MAR-2025
DEFINITION  D-arabinono-1,4-lactone oxidase [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104666
VERSION     WP_258104666.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 439)
  AUTHORS   Huh,W.K., Lee,B.H., Kim,S.T., Kim,Y.R., Rhie,G.E., Baek,Y.W.,
            Hwang,C.S., Lee,J.S. and Kang,S.O.
  TITLE     D-Erythroascorbic acid is an important antioxidant molecule in
            Saccharomyces cerevisiae
  JOURNAL   Mol Microbiol 30 (4), 895-903 (1998)
   PUBMED   10094636
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015963.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04030.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..439
                     /product="D-arabinono-1,4-lactone oxidase"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0003885 - D-arabinono-1,4-lactone oxidase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=50017
     Region          3..426
                     /region_name="FAD_lactone_ox"
                     /note="sugar 1,4-lactone oxidases; TIGR01678"
                     /db_xref="CDD:273751"
ORIGIN      
        1 mpvyrnwsgs fqfkyqklhq ptseseivav vrqatnsrqk vkvvgsghsc sqiakaddai
       61 lislknynri leadpssglv kaqsgiilrd lckqlkhhgl alqnmgtide qtlagaiatg
      121 thgtgitqpa idqqihaytl vtgtgeviev dqnhelyeag kvalgalgil stitlkcvan
      181 fklevntfst slqqavkklp ehlqspyfrl wwfphtnkvq vwqanettkp asieskwayw
      241 yknillgnyv telglwftsf lptsirsfnr wvfnqlfsqp qsnvryayda fvipirtkql
      301 vmeyaipigq aesaikkmea fiesgsqvvh fpieirfaps neawmsmsye rtscyigiit
      361 yhpygkkiph epyfrqihhi ladfdarphw akihyfsaea leqkyakwnd fkrlrsqldp
      421 egmfeneylk klfstekkt
//
LOCUS       WP_258104704            1111 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 2 TIM barrel-domain containing protein
            [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104704
VERSION     WP_258104704.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 1111)
  AUTHORS   Jacobson,R.H., Zhang,X.J., DuBose,R.F. and Matthews,B.W.
  TITLE     Three-dimensional structure of beta-galactosidase from E. coli
  JOURNAL   Nature 369 (6483), 761-766 (1994)
   PUBMED   8008071
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02836.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1111
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..1111
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=126148
     Region          62..1091
                     /region_name="Bgal_small_N"
                     /note="Beta galactosidase small chain; cl46900"
                     /db_xref="CDD:481240"
ORIGIN      
        1 mvirwrysyg ndkrcrhwnr csaclvvivv fflqspkvta qtvtgepagi ppkpsvyefa
       61 pweeplitsi nrdqaratay syatvqeala geremsyryl nlnglwdfky aenfeaapqd
      121 fynsrvsgwd qievpsnwel kgydipiyas avypfrpvnp pyvpkdyngi gsyqrtfdvp
      181 dswdnmnitl hfggvssafr vwvngkflgy gedsclptef nvtpylqege nilsvqvirw
      241 sdgayledqd hwrmsgiqre vlllaepklr iadfhyqtkl ddnyedaifs lrprldnytg
      301 dalgsainfe aqlydankrp vfdspltisa qeiinesypr ldnvkfglle etvknplkws
      361 detpnlytlv mslkdtlgnv leaksckvgf rsiefskdes kllingkity lyginrhdhh
      421 avkgkalsre dieadvrmik qfnfncirts hypndpyfyd lcdqygilvm deanlethgl
      481 ggklsndpqw tqahmerlqr mvmrdknhps viiwslgnea grgpnhaama ewahdfditr
      541 pvhyepaqgn hraegyippg hpdypkdhsh riqvptdqpy vdmvsrfypg lftvdllanq
      601 pgdnrpiifv eyshsmgnst gnmkewwdaf rttkrmiggc iwdfkdqgll kkdslgndff
      661 ayggdfgeer hhgnfclngi vasdgrpkaa iyeckrvyqp iestylgngq lqienrhahl
      721 ntkmykpvli flrdgqvysr keldaisimp gdtmvvdisk yvpktpdgce tlgeikwklm
      781 dsklwapkgy eiasnqfalt dlitisvksa kgplnltqnd slvlvsgegf rltfdkrlga
      841 lssyisagrq qvfapllphf trpltdndkk gwkpqrelrs wyearpvlkd cgvsevngdi
      901 vvvsnyemia dsafvevtyt vvpsglvkia ykltanealp nmpkvgmqmg itneydqakw
      961 ygkgplenyv draygfdaev yqanldqine pypmpqergn ltdvrwmslt ggatgllvva
     1021 dsllsmsvwr yteeninqat hiyelqspgf ltlnidlrqm gvggndswss vaaplekyqi
     1081 pagyyaysff llpisgdgni dkiinqnfir q
//
LOCUS       WP_258104729             518 aa            linear   BCT 02-MAR-2025
DEFINITION  MGH1-like glycoside hydrolase domain-containing protein
            [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104729
VERSION     WP_258104729.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 518)
  AUTHORS   Ndeh,D., Rogowski,A., Cartmell,A., Luis,A.S., Basle,A., Gray,J.,
            Venditto,I., Briggs,J., Zhang,X., Labourel,A., Terrapon,N.,
            Buffetto,F., Nepogodiev,S., Xiao,Y., Field,R.A., Zhu,Y.,
            O'Neil,M.A., Urbanowicz,B.R., York,W.S., Davies,G.J., Abbott,D.W.,
            Ralet,M.C., Martens,E.C., Henrissat,B. and Gilbert,H.J.
  TITLE     Complex pectin metabolism by gut bacteria reveals novel catalytic
            functions
  JOURNAL   Nature 544 (7648), 65-70 (2017)
   PUBMED   28329766
  REMARK    Erratum:[Nature. 2017 Aug 31;548(7669):612. doi:
            10.1038/nature23659.. PMID: 29411780]
REFERENCE   2  (residues 1 to 518)
  AUTHORS   Bianchetti,C.M., Elsen,N.L., Fox,B.G. and Phillips,G.N. Jr.
  TITLE     Structure of cellobiose phosphorylase from Clostridium thermocellum
            in complex with phosphate
  JOURNAL   Acta Crystallogr Sect F Struct Biol Cryst Commun 67 (Pt 11),
            1345-1349 (2011)
   PUBMED   22102229
REFERENCE   3  (residues 1 to 518)
  AUTHORS   Kurakata,Y., Uechi,A., Yoshida,H., Kamitori,S., Sakano,Y.,
            Nishikawa,A. and Tonozuka,T.
  TITLE     Structural insights into the substrate specificity and function of
            Escherichia coli K12 YgjK, a glucosidase belonging to the glycoside
            hydrolase family 63
  JOURNAL   J Mol Biol 381 (1), 116-128 (2008)
   PUBMED   18586271
  REMARK    Erratum:[J Mol Biol. 2008 Nov 14;383(3):745]
REFERENCE   4  (residues 1 to 518)
  AUTHORS   Cui,Z., Maruyama,Y., Mikami,B., Hashimoto,W. and Murata,K.
  TITLE     Crystal structure of glycoside hydrolase family 78
            alpha-L-Rhamnosidase from Bacillus sp. GL1
  JOURNAL   J Mol Biol 374 (2), 384-398 (2007)
   PUBMED   17936784
REFERENCE   5  (residues 1 to 518)
  AUTHORS   Gibson,R.P., Gloster,T.M., Roberts,S., Warren,R.A., Storch de
            Gracia,I., Garcia,A., Chiara,J.L. and Davies,G.J.
  TITLE     Molecular basis for trehalase inhibition revealed by the structure
            of trehalase in complex with potent inhibitors
  JOURNAL   Angew Chem Int Ed Engl 46 (22), 4115-4119 (2007)
   PUBMED   17455176
REFERENCE   6  (residues 1 to 518)
  AUTHORS   Hidaka,M., Honda,Y., Kitaoka,M., Nirasawa,S., Hayashi,K.,
            Wakagi,T., Shoun,H. and Fushinobu,S.
  TITLE     Chitobiose phosphorylase from Vibrio proteolyticus, a member of
            glycosyl transferase family 36, has a clan GH-L-like
            (alpha/alpha)(6) barrel fold
  JOURNAL   Structure 12 (6), 937-947 (2004)
   PUBMED   15274915
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046269.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22422.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..518
                     /product="MGH1-like glycoside hydrolase domain-containing
                     protein"
                     /calculated_mol_wt=59977
     Region          <236..372
                     /region_name="GDB1"
                     /note="Glycogen debranching enzyme (alpha-1,6-glucosidase)
                     [Carbohydrate transport and metabolism]; COG3408"
                     /db_xref="CDD:442634"
ORIGIN      
        1 mpqfklerlp viiacfvlli fisacsgded etsiltadny rhyvdvfnss edenitqaip
       61 nnkswewmka niplfecpqq nfeemyyyrw wtlrkhikat pvgyamtefl vdrsysdkyn
      121 liacaighhv sesrwlyndq ymddylhvwy rgndgqpmkk lnkfsswtpy aeyqrflvnl
      181 dttylldmyp dfvkeysrwe qerrlssglf wqedvkdgme eqisggrrvk narptinsym
      241 ygnalalaem aklkgdekva slytakadti kalvdtvlwn pelnfyetlr engqyadvre
      301 aigyipwyfg lpgedktvaw nqvtdpqgfl apfglttaei rhpefrgngc ckcewdgavw
      361 pfatsqtltg lanllndydq vlmtdsiyfd lletyvesqy yrgrpyigey ldeqtgywlk
      421 gdqersryyn hstfndlvit glvglrprad diievnplvp adkwdwfald gvryhgkkis
      481 iiwdkdgtky gkgagltila dgkqiansts lqkltanl
//
LOCUS       WP_258104757             700 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxy terminal-processing peptidase [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104757
VERSION     WP_258104757.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023246.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11818.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..700
                     /product="carboxy terminal-processing peptidase"
                     /EC_number="3.4.21.102"
                     /calculated_mol_wt=79179
     Region          11..660
                     /region_name="PRK11186"
                     /note="carboxy terminal-processing peptidase"
                     /db_xref="CDD:236873"
ORIGIN      
        1 mrdvrryilg ivlflglvts sfaqvdslqe lapkpehaie tkvivgllnn yhynkvfidd
       61 slsntifnny fssldpnksy flandvayfe kykddlddai ldgdvefgfq vftlyreral
      121 qriahvytll enefdysede ylvadrskmp wpetteelne iwrkiiknqa lsyklagkew
      181 ddictsltkr ynriekaliq ynsedvyqay mnaftsaydp htdffspidr dnfkiemsks
      241 legigarltq qldytviadv ipggpayksk flqkddkivg vaqgddgeye dvigwrlddv
      301 vqkirgpkgt vvrlqilkan qemgtlpdtl rlvrdkikle essakaeiip itegnkvykl
      361 gvitvpsfyi dfderskgvp dyksttrdvk klitdlqadg idglmidlry ngggsldeai
      421 tltglfipdg pvvqvknple mvdvhededd gvfydgplav linrysasas eifsgaiqdy
      481 krgivlgens fgkgtvqnli glersvanel krevlsknfs kdevdelvrm rsevlsgdlp
      541 vgqlkltlak fyrvtgsstq rlgvapdiaf pspydgeefg egsrpnalpw deiktsrfys
      601 tnkvtdemie klskiyqkhl sddkdlidll nevnkikrmn adnqislnfd trknqdgtdd
      661 latsidadev vtedeteekl sddpylkegl rllaelsrki
//
LOCUS       WP_258104743             997 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Marinoscillum sp.
            MHG1-6].
ACCESSION   WP_258104743
VERSION     WP_258104743.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 997)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 997)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 997)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 997)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..997
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..997
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=113935
     Region          8..121
                     /region_name="terB_like"
                     /note="tellurium resistance terB-like protein; cl11965"
                     /db_xref="CDD:448369"
     Region          236..461
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Region          255..763
                     /region_name="3a01204"
                     /note="The Eye Pigment Precursor Transporter (EPP) Family
                     protein; TIGR00955"
                     /db_xref="CDD:273361"
     Site            272..279
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213179"
     Site            order(275..276,278..280,319,402..403,435)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:213179"
     Site            316..319
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213179"
     Site            378..387
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213179"
     Site            398..403
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213179"
     Site            406..409
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213179"
     Site            431..437
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213179"
ORIGIN      
        1 mseetlsaii lllaivaked dvtldekasi qtfleeslne tdairymtlf iklsseqald
       61 kesekkriik ecskinreqt vqqkvaiilh liiliaadgh vsereqelly yiseqlnvsk
      121 rvtdlvkafv ifedrkkiis rniliidngk eevpercrhl ahegmpgflf vllvpevniy
      181 ltkyigehdl elngapmrng riyvfptgsv ikstdfspiy hseivnefqt idsdhhitft
      241 arnisfkfpn gdlglrdvni eeesgklial mggsgagkst llnvlngneq pskgsvring
      301 vdihtqkski dgvigyvpqd dllieeltvf dnlfyaaklc fkslndgqle slvtktlqsl
      361 glyetrnlkv gsplektisg gqrkrlnigl ellrepsvmf vdeptsglss rdsenimdll
      421 kelslkgkmi fvvihqpsee ifkmfdklii ldvggyqvyy gnpigaieyf ksivkmvdps
      481 kavnpeqifn iieskviney gnftnqrkvt paqwnqhfke qitieeitet aivphktlhv
      541 pnklkqlaif tirdlkakls nkqylfinll eapvlavila fivkyiphem tdyvfrenln
      601 ipvfffmsvi valfmgltvs aeeiikdqki lkresflnls rgsylfsklf ilfglsavqt
      661 ltfvligsfi leihgmnltf wmilfsvscf anvlglniss afksavtvyi lipllvipql
      721 ilsgvvvnfd klhpnlstrd kvpfigeima srwafealav hqfvyndyea nfygedkima
      781 eseyktiyff pelesdleyi hhkingstpe dsvhiisnla iikkalqrel lsikgaefpe
      841 ideleihnfk ehtyestraf lkklesyynk rykkanelkq aflskytkde ndhqklidfr
      901 nkcenqaiae lvkntaaeqr fitvgdeiiq kiypifsept fpdhvfdfra qfyvpykhff
      961 galidtsifn vyiiwlmtvv lfvalyfdwl rkfvslf
//
LOCUS       WP_258104783             237 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF998 domain-containing protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104783
VERSION     WP_258104783.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017959.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06197.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..237
                     /product="DUF998 domain-containing protein"
                     /calculated_mol_wt=26829
ORIGIN      
        1 msiffpvvlv fgsilkggca eiqnaissyy ytnmrdlfvg wiclvsmllm sykgygridq
       61 vlsitagvfa lgvaffptsi rppftacvse ginqgvrgvi hlvsaagfli tlaylsyfqf
      121 tksrrwttpr krirnliyqv caiimvasti liafymitwk ftfpalqglk pifwletial
      181 fafgfswlvk geiilkdrkr ptfdlmkgil qtlirpfkka kklsvfreti kkpirak
//
LOCUS       WP_258104855             909 aa            linear   BCT 02-MAR-2025
DEFINITION  4-alpha-glucanotransferase [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104855
VERSION     WP_258104855.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 909)
  AUTHORS   Takaha,T., Yanase,M., Okada,S. and Smith,S.M.
  TITLE     Disproportionating enzyme (4-alpha-glucanotransferase; EC 2.4.1.25)
            of potato. Purification, molecular cloning, and potential role in
            starch metabolism
  JOURNAL   J Biol Chem 268 (2), 1391-1396 (1993)
   PUBMED   7678257
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014499.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02446.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..909
                     /product="4-alpha-glucanotransferase"
                     /EC_number="2.4.1.25"
                     /GO_function="GO:0004134 - 4-alpha-glucanotransferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=105727
     Region          47..891
                     /region_name="PLN02950"
                     /note="4-alpha-glucanotransferase"
                     /db_xref="CDD:215512"
ORIGIN      
        1 mkrfnpmkvw fdlqvktqpg ervfviikka aqhqelviel fwqdgrwkgs gdlrngagli
       61 yyyevrsese swsefgeart vkmsdtesly lrdhfrysds penllhsspf ykaffnrkss
      121 kkktskksgk asknltvsit lraprvgpny lvgimgntpe lgewsegkvr hlndpnypiw
      181 dytldlpkqp srieykyviv naetgriatw etggnrvvel sdemldseqv aindeyfsyp
      241 sdpwkgagfa ipvfsirses gagvgefadi pklvdwavkt nmkiiqvlpv ndtvathtwk
      301 dsypyasisv halhpiyasm kkigdlkdkk lqksineeae rlnqraqldy egvmklkskf
      361 fkyhfdevki kflnskelng fitqniswii ayavfsflrd kfktadfsqw geyaqmtdeq
      421 liefaqpgqd hyediaihyy iqyhldqqlk eateyarqhg vvlkgdipig ifrhsvdawr
      481 wphlfnmdtq tgappddfsv vgqnwgfpty nweameaggy rwwisrmkkm adyfdvfrid
      541 hilgffriwe mpkhaiqgim ghfspalpys iseiesrgis wnydrfckpy isedlldylf
      601 aehtdwikkn flierennqf dlkpefstqv gicnrldklv etepgkapff nslrlplysl
      661 pgevlffesd kqkgsfnpri slhqtssfah ldpmtrhqlf elhndyfyhr hnhfwresal
      721 rklpmlkrat nmlicgedlg mvpacvpgvm delqilslai qrmpndaref wqpadipwmy
      781 vtstgshdvs nlrewwleds elsqrffnni lhfhgiapkr ceawvayetv rqhlaspaml
      841 avfpiqdila msddlkrgna meerinvpai vphywryrlh inieellead kfngnlsglv
      901 esngrftdy
//
LOCUS       WP_258101582             214 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfotransferase [Marinoscillum pacificum].
ACCESSION   WP_258101582
VERSION     WP_258101582.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum pacificum
  ORGANISM  Marinoscillum pacificum
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 214)
  AUTHORS   Valentim,C.L., Cioli,D., Chevalier,F.D., Cao,X., Taylor,A.B.,
            Holloway,S.P., Pica-Mattoccia,L., Guidi,A., Basso,A., Tsai,I.J.,
            Berriman,M., Carvalho-Queiroz,C., Almeida,M., Aguilar,H.,
            Frantz,D.E., Hart,P.J., LoVerde,P.T. and Anderson,T.J.
  TITLE     Genetic and molecular basis of drug resistance and species-specific
            drug action in schistosome parasites
  JOURNAL   Science 342 (6164), 1385-1389 (2013)
   PUBMED   24263136
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036807.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17784.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Marinoscillum pacificum"
                     /db_xref="taxon:392723"
     Protein         1..214
                     /product="sulfotransferase"
                     /calculated_mol_wt=24707
     Region          9..212
                     /region_name="Sulfotransfer_4"
                     /note="Sulfotransferase domain; pfam17784"
                     /db_xref="CDD:465504"
ORIGIN      
        1 miylsrnkki fciglnktgt ttlefcldel gfrmgdqlka kpllddwakr nfkpiikyck
       61 sadafqdspf slphtylalh safprakfil svrnnpdqwa dsittfhgkl wangntptke
      121 dlqnainhtk grpwkvnrll fntpeddpyn rdvlkvfydn hnrnvvdyfk tlpgsllvln
      181 vakkesyrdf ceflnvkpmr elfpiknsts dlkl
//
LOCUS       WP_258104901             161 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104901
VERSION     WP_258104901.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..161
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=18064
     Region          13..132
                     /region_name="NUDIX_ADPRase"
                     /note="ADP-ribose pyrophosphatase and similar proteins;
                     cd18880"
                     /db_xref="CDD:467591"
ORIGIN      
        1 mvqdinpfsg svrvrvcgll eekdkilllk heglgsagyl wsppgggvef gqsiketlkr
       61 efleetnlsi diehfmfvne yidsqyhaie lffkvkking qlklgkdpel apnkqilsda
      121 qfisimdlqk mdhttihnsl ldctssgklf qkngffasen k
//
LOCUS       WP_258104909             217 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4905 domain-containing protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104909
VERSION     WP_258104909.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027573.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16248.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..217
                     /product="DUF4905 domain-containing protein"
                     /calculated_mol_wt=24525
     Region          22..103
                     /region_name="DUF4905"
                     /note="Domain of unknown function (DUF4905); pfam16248"
                     /db_xref="CDD:435235"
ORIGIN      
        1 mehhlsfdfs fdivgkiwql kadhkngqla levrneedqs vsflvfdlet feisdylnie
       61 vidwwstlhg iqsgdlaiiq ysdpqdpskk tylsyncetq rltqsddgfi esedsggmap
      121 vfapmgseif elckeyleed iqlgveyyee gstiifsyyl rsgakfdryl lvnkdgeeil
      181 ravqdtgldg yasggfliqs gflifiadsk qvngiki
//
LOCUS       WP_258104943             199 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2085 domain-containing protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104943
VERSION     WP_258104943.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021384.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09858.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..199
                     /product="DUF2085 domain-containing protein"
                     /calculated_mol_wt=22443
     Region          8..>76
                     /region_name="DUF2085"
                     /note="Predicted membrane protein (DUF2085); cl01570"
                     /db_xref="CDD:470256"
ORIGIN      
        1 mephhelthf vtvffglfch qnesilmhie gtpfplcirc iglqtgffsv wlslsffiey
       61 qsnrvsnwfg gvgmvflala alewllaqit gyaatdlsrl tagllggigi gllvnnyqky
      121 sihfnidrfr klkqalllly gslllvyvvv ydplisslmm limalimian igytlglivl
      181 rirqnfnspk ifyhetskn
//
LOCUS       WP_258105023             475 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleoside recognition domain-containing protein [Marinoscillum sp.
            MHG1-6].
ACCESSION   WP_258105023
VERSION     WP_258105023.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 475)
  AUTHORS   Hantke,K.
  TITLE     Is the bacterial ferrous iron transporter FeoB a living fossil?
  JOURNAL   Trends Microbiol 11 (5), 192-195 (2003)
   PUBMED   12781516
REFERENCE   2  (residues 1 to 475)
  AUTHORS   Loewen,S.K., Ng,A.M., Yao,S.Y., Cass,C.E., Baldwin,S.A. and
            Young,J.D.
  TITLE     Identification of amino acid residues responsible for the
            pyrimidine and purine nucleoside specificities of human
            concentrative Na(+) nucleoside cotransporters hCNT1 and hCNT2
  JOURNAL   J Biol Chem 274 (35), 24475-24484 (1999)
   PUBMED   10455109
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019292.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07670.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..475
                     /product="nucleoside recognition domain-containing
                     protein"
                     /calculated_mol_wt=52388
     Region          <5..475
                     /region_name="FeoB"
                     /note="Fe2+ transporter FeoB [Inorganic ion transport and
                     metabolism]; COG0370"
                     /db_xref="CDD:440139"
ORIGIN      
        1 msdqnnqidd iisfasslrw kvgddfhdkl teaiysdaav itsrvetkgd deksyhfdrl
       61 ldriltsrrf gflimalils vilwltiqga nypssmlntl lleliyptlk svsasiglpw
      121 wldgflfdgv ymavawviav mlppmaiffp lftlledfgy lprvafnldg lfkksgahgk
      181 qaltmsmgwg cnaagvvatr iidsprerli aiitnnfslc ngrwptqili atifigalvp
      241 sglsgtistl aviaiaflgi vfmfltswll srtmlkgevs tftlelppyr pprfwktiyt
      301 slidrtiivl wraiifaapa gaviwlisni digstsvash aiefldpfgi liglngvill
      361 ayvvaipane iviptvlmlt vahfnitgfg agdgvmfeld svsetenilk tggwtlltgi
      421 nlmlfsllhn pcsttiftiy ketkswkwts vatilpvvfg vvvcfliaqc wrllf
//
LOCUS       WP_258105046             131 aa            linear   BCT 02-MAR-2025
DEFINITION  SRPBCC domain-containing protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258105046
VERSION     WP_258105046.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 131)
  AUTHORS   Stark,J.L., Mercier,K.A., Mueller,G.A., Acton,T.B., Xiao,R.,
            Montelione,G.T. and Powers,R.
  TITLE     Solution structure and function of YndB, an AHSA1 protein from
            Bacillus subtilis
  JOURNAL   Proteins 78 (16), 3328-3340 (2010)
   PUBMED   20818668
REFERENCE   2  (residues 1 to 131)
  AUTHORS   Lotz,G.P., Lin,H., Harst,A. and Obermann,W.M.
  TITLE     Aha1 binds to the middle domain of Hsp90, contributes to client
            protein activation, and stimulates the ATPase activity of the
            molecular chaperone
  JOURNAL   J Biol Chem 278 (19), 17228-17235 (2003)
   PUBMED   12604615
REFERENCE   3  (residues 1 to 131)
  AUTHORS   Panaretou,B., Siligardi,G., Meyer,P., Maloney,A., Sullivan,J.K.,
            Singh,S., Millson,S.H., Clarke,P.A., Naaby-Hansen,S., Stein,R.,
            Cramer,R., Mollapour,M., Workman,P., Piper,P.W., Pearl,L.H. and
            Prodromou,C.
  TITLE     Activation of the ATPase activity of hsp90 by the stress-regulated
            cochaperone aha1
  JOURNAL   Mol Cell 10 (6), 1307-1318 (2002)
   PUBMED   12504007
REFERENCE   4  (residues 1 to 131)
  AUTHORS   Sevier,C.S. and Machamer,C.E.
  TITLE     p38: A novel protein that associates with the vesicular stomatitis
            virus glycoprotein
  JOURNAL   Biochem Biophys Res Commun 287 (2), 574-582 (2001)
   PUBMED   11554768
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08327.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..131
                     /product="SRPBCC domain-containing protein"
                     /calculated_mol_wt=15028
     Region          7..130
                     /region_name="COG5580"
                     /note="Activator of HSP90 ATPase [Posttranslational
                     modification, protein turnover, chaperones]"
                     /db_xref="CDD:444319"
ORIGIN      
        1 meyfcdmpdf kkyftipaap eevfaaltfk ptielwtgsp avfelkkgae fsmwdesivg
       61 elvdfdpgkk lveqwyfgah desivtlkfh phkkgtslev nhtnipendf edivggwhem
      121 fiqglldfye e
//
LOCUS       WP_258105113             357 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme [Marinoscillum
            sp. MHG1-6].
ACCESSION   WP_258105113
VERSION     WP_258105113.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..357
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /calculated_mol_wt=40011
     Region          33..301
                     /region_name="SerC"
                     /note="Phosphoserine aminotransferase [Coenzyme transport
                     and metabolism, Amino acid transport and metabolism];
                     COG1932"
                     /db_xref="CDD:441535"
ORIGIN      
        1 mskniyftpg ptqlfytveg hiksalkddi gsishrskaf ekvfaearen ltellglsqg
       61 heiyftssan eiweriiqnl vahrshhfsn gsfakkfysf akdyqkdsil tesgpgkpfe
      121 dlsiaegsel isctlnetsi gytfpiqdiy dlkakhpdkl vavdgvsafp cipfdfskvd
      181 tayfsvqksf glpsglgvwi lnkacvekae qleangqitg syhklselrk hgaknqtpet
      241 pntlgiyllg kvakdmidrg vkniqnetiy kstllyqtle nhpdfnpfie nkehrsktvv
      301 vseckngsae vierfkkkgw ilgsgyssfk adhirianfp mhskeqieql cdyfnqg
//
LOCUS       WP_258105205             670 aa            linear   BCT 02-MAR-2025
DEFINITION  SBBP repeat-containing protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258105205
VERSION     WP_258105205.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018449.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06739.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..670
                     /product="SBBP repeat-containing protein"
                     /calculated_mol_wt=73587
     Region          <6..>153
                     /region_name="NHL"
                     /note="NHL repeat unit of beta-propeller proteins;
                     cl18310"
                     /db_xref="CDD:302697"
     Region          6..62
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          52..84
                     /region_name="SBBP"
                     /note="Beta-propeller repeat; pfam06739"
                     /db_xref="CDD:115400"
     Region          67..114
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          477..>547
                     /region_name="CarboxypepD_reg"
                     /note="Carboxypeptidase regulatory-like domain; pfam13620"
                     /db_xref="CDD:433354"
     Region          598..663
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     cl46851"
                     /db_xref="CDD:481191"
ORIGIN      
        1 mssffdiald snqntyltgh fqgswtfkns sitsdyrndi ltvklnsdgn vvwaqkfgps
       61 dkrdfgssia idslgnvyva gslndaqnti likydsdgel iwerqiglgy twytkrrimt
      121 vlnnliylaa dgnvivyatn gdslaslgnn atylsksgdy liasnsesis sydsriidsn
      181 gliskisele ipngilnina cewndsslvf agvyqqnilk dnqkvfsqdi ektgmflinm
      241 dtssqilwak palatpydie iskdkvlvcg syrnfgefds iqvgelglfe eifvagyetr
      301 sgqltdlita ggggeddigy smapirngef lltgsayrwa nglnfgdiyi egplagnang
      361 fiakigspqv dasiqgeihk qgspssarik ltkvqneklv tvydnfigng qfelslsdsg
      421 yyflkahyyd nqfmgaylgd qflwddaiql ninsdtaite liinlielpt legngaisgs
      481 iedslgnpkr fidvilstep dntpiaysls dtagnysfqg lpngtfnilv dtagifmddy
      541 ytvtvsansr lysesinydy visdgvifkk nektipqdkq dstlfplnvs tqlssfhvyp
      601 npienfaeis mvhdldeile isiiditgns vlivddfesp mnlsslshgv ytlcitqtng
      661 qvtflkiikl
//
LOCUS       WP_258105314             391 aa            linear   BCT 02-MAR-2025
DEFINITION  thioredoxin family protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258105314
VERSION     WP_258105314.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025268.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13899.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..391
                     /product="thioredoxin family protein"
                     /calculated_mol_wt=45610
     Region          1..134
                     /region_name="SoxW"
                     /note="Thioredoxin-related protein SoxW [Posttranslational
                     modification, protein turnover, chaperones]; COG2143"
                     /db_xref="CDD:441746"
     Region          <321..372
                     /region_name="TPR_12"
                     /note="Tetratricopeptide repeat; pfam13424"
                     /db_xref="CDD:315987"
ORIGIN      
        1 mrhqltlvcl laclgataqm idfqdpdwqs amdkakaddk llmvylntew cepclemeeg
       61 tfldpkdsaf ysenfvnvpf daeafpgaei adrydvfvyp aylfinsyge lihkgcgwmr
      121 peefislget aldeeknlms yqkrftdglr apqflaelss lmdyscsdvs rimktfykdl
      181 pqeewleeps wtminfnidd pfspqfqyli tyddlfairy grdtidakiy evllgqfidi
      241 yegadltlfa nqalqkmled ldfakkeelv hmiemqyaei tedwelyges vvnvvdeqnv
      301 tdpdrlnefa wkfylyipkk eqldaaitwm ekslreekta tsldtyasll fktgrskeai
      361 kwekkaiqma ddnledlthy qlqmekfkmg r
//
LOCUS       WP_258105360             114 aa            linear   BCT 02-MAR-2025
DEFINITION  phage holin family protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258105360
VERSION     WP_258105360.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018980.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07332.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..114
                     /product="phage holin family protein"
                     /calculated_mol_wt=12860
ORIGIN      
        1 mslinnlldk isgyiqakge klkldiiaqv skllahfvaf llvgligfff fifgsitlga
       61 ylnevmesty lgyliltgfy llllivivll lktnriqkwm etffinlsen msde
//
LOCUS       WP_258105374             187 aa            linear   BCT 02-MAR-2025
DEFINITION  NnrU family protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258105374
VERSION     WP_258105374.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 187)
  AUTHORS   Bartnikas,T.B., Tosques,I.E., Laratta,W.P., Shi,J. and
            Shapleigh,J.P.
  TITLE     Characterization of the nitric oxide reductase-encoding region in
            Rhodobacter sphaeroides 2.4.3
  JOURNAL   J Bacteriol 179 (11), 3534-3540 (1997)
   PUBMED   9171397
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018949.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07298.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..187
                     /product="NnrU family protein"
                     /calculated_mol_wt=20538
     Region          7..>121
                     /region_name="NnrU"
                     /note="NnrU protein; cl17713"
                     /db_xref="CDD:473088"
     Region          75..186
                     /region_name="STE14"
                     /note="Protein-S-isoprenylcysteine O-methyltransferase
                     Ste14 [Posttranslational modification, protein turnover,
                     chaperones]; COG2020"
                     /db_xref="CDD:441623"
ORIGIN      
        1 mssyipliig wtvylglhsv faaegvkrri plgeqayrli ystmstigli vliglmavsk
       61 svyfyeqtfv tkylglglgv wgvmlmvaaf reislksflg vhpaenkglv ttgihakvrh
      121 piysggllil lgmlisvpsn ivlvsiacic aylpigihfe ekkllkdfgd dyreyrkqvk
      181 aiipgvm
//
LOCUS       WP_258105405             225 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Marinoscillum sp.
            MHG1-6].
ACCESSION   WP_258105405
VERSION     WP_258105405.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 225)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 225)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..225
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=24434
     Region          2..223
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(9,11..12,14,31..33,77..79,127..129,143,147,173..176)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(101,129,143,147)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mskniiitgt tgnlgsavak kfisegyhvl gsstpgrstp ddgvdyfead ltnpdsskef
       61 fkrafkkydt iiagiflvgg fgmsniente dkdihkmfnl nfltafhctk nlyphlklyg
      121 ggkmvvvgak palegggaam lpytisknav mklaellnet gqddyiqtsv iipsiidtpv
      181 nreampkanf sdwvtpesia esiyflisek gnklrdtvlk lygns
//
LOCUS       WP_258104692             348 aa            linear   BCT 02-MAR-2025
DEFINITION  L-rhamnose/proton symporter RhaT [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258104692
VERSION     WP_258104692.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 348)
  AUTHORS   Via,P., Badia,J., Baldoma,L., Obradors,N. and Aguilar,J.
  TITLE     Transcriptional regulation of the Escherichia coli rhaT gene
  JOURNAL   Microbiology (Reading) 142 (Pt 7), 1833-1840 (1996)
   PUBMED   8757746
REFERENCE   2  (residues 1 to 348)
  AUTHORS   Tate,C.G., Muiry,J.A. and Henderson,P.J.
  TITLE     Mapping, cloning, expression, and sequencing of the rhaT gene,
            which encodes a novel L-rhamnose-H+ transport protein in Salmonella
            typhimurium and Escherichia coli
  JOURNAL   J Biol Chem 267 (10), 6923-6932 (1992)
   PUBMED   1551902
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018123.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06379.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..348
                     /product="L-rhamnose/proton symporter RhaT"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015153 - rhamnose transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0008645 - hexose transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=37497
     Region          1..346
                     /region_name="RhaT"
                     /note="L-rhamnose-proton symport protein (RhaT); cl19288"
                     /db_xref="CDD:302813"
ORIGIN      
        1 msvingillh gvgasaaslc ytpekklirw swqsywlaqa ficwfllpli gayitipela
       61 tvlrhapada mwksfalgaa ygiggtafgl aiqhigfslt yaisigiscv lgtllppwvk
      121 gelttvlsqp gsgfiilgmv lgvcgiafcg iagrskevdi asqekdraqn fnlgkglfls
      181 isagvlsaly gfsldqgqpi advaaqygag qfqgnviyif sntgafifpm vyslylhrke
      241 gtfkeyftpa eagarrplar nyllailtgc lwysqfffyg lghtrmgdye ftswaihmim
      301 lvllslvtgl llkewvgssk ktvwllslal lvligsvivl tignsmga
//
LOCUS       WP_258105425            1113 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258105425
VERSION     WP_258105425.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 1113)
  AUTHORS   Miyata,T., Kashige,N., Satho,T., Yamaguchi,T., Aso,Y. and Miake,F.
  TITLE     Cloning, sequence analysis, and expression of the gene encoding
            Sphingomonas paucimobilis FP2001 alpha-L -rhamnosidase
  JOURNAL   Curr Microbiol 51 (2), 105-109 (2005)
   PUBMED   15991055
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17132.9
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..1113
                     /product="glycosyl hydrolase"
                     /calculated_mol_wt=125368
     Region          12..901
                     /region_name="Glyco_hydro_106"
                     /note="alpha-L-rhamnosidase; pfam17132"
                     /db_xref="CDD:435739"
     Region          961..>1075
                     /region_name="LacZ"
                     /note="Beta-galactosidase/beta-glucuronidase [Carbohydrate
                     transport and metabolism]; COG3250"
                     /db_xref="CDD:442481"
ORIGIN      
        1 mgkvhfdtnd dqpwvfwywm yasvskegit adleamkeag lagaymmpil geldppvyep
       61 talqlspeww gmvehaikea grlglelgih asdgfavagg pwikpeqsmq klvwsetvvn
      121 ggkqfndtlp qpptiegyyr diaiiaipnl ggepvssfnl npsvisenae nvaflgidqt
      181 eekfksddpv wiqfefddpf tcrsvrptgp ssnlqwqrlt mlasqdgeqf dtvaqmkpar
      241 qgwqnwdegs tfsvppttar yfrfaynpeg tepgsedlda gkwkaklvvq nielmnspki
      301 hqiegksglv wrisdrtses qipkslctsq nqvilltdsl dengvlnwnv pdgswtvlrm
      361 ghtstghtny tgggglglec dkfskeaval qfknwfgaiq qkagselare vitrfhvdsw
      421 ecgsqnwsst faeefltrrg yeitpylpvl agiplespev serflydfre tiselyienf
      481 yqtlselahn ngvqfsaenv sptmlsdgvr hfaevdlpig efwlrspthd kpndmldais
      541 gghiygkkii paeaftqlrm dwdehpaslk algdyqytlg inrfvyhvfa hnpwmdrkpg
      601 mtlngvglyf qrdqtwwkpg ramvdyatrc qallqngipv rdiavfigee lprrsmlpdr
      661 lvrilpglyd qelrerestr lrnegtptmk qpanvtltan mavnfpwvdp lngyqydsfn
      721 phalmtlahi ekgrvvfaeg sgygilvipq ntlmnpegqr msvavaskll klieegatvy
      781 fqgemdqtlg lkgsdkelda vmnqifggkf sqlggslkmk algqgkvltg kfdiaslepi
      841 ginrdfvamd qngkqveeis wthrkdkgfd lyflsnqtee vreiyasvnl egyqpeiydp
      901 vvdelieard wkviegriel plrlepngsl flifskagep trskgknwkd ftevmqlqes
      961 wqvqfdtadf gpkgvfdfdr liswteheif diryfsgtat yqttfefdkk kgdarywlnl
     1021 gevgniaevk vngvqcaiaw tppyqveitd alkagindli vevtntwqnr ligdqelpee
     1081 ervtftprap yllegrplir sgllgpvsil ked
//
LOCUS       WP_258105441             104 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6787 family protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258105441
VERSION     WP_258105441.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042899.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20584.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..104
                     /product="DUF6787 family protein"
                     /calculated_mol_wt=12567
     Region          21..97
                     /region_name="DUF6787"
                     /note="Family of unknown function (DUF6787); pfam20584"
                     /db_xref="CDD:466733"
ORIGIN      
        1 mswikklqqr wnlknttqvi lvlvvfactg ftvmflkkpi vdlftsdsdq nfwfsviyyl
       61 lilpvynvvl lfyglifgqf rffwefekkm fsrfkrkqnd peqe
//
LOCUS       WP_258105547             153 aa            linear   BCT 02-MAR-2025
DEFINITION  Lrp/AsnC ligand binding domain-containing protein [Marinoscillum
            sp. MHG1-6].
ACCESSION   WP_258105547
VERSION     WP_258105547.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Ren,J., Sainsbury,S., Combs,S.E., Capper,R.G., Jordan,P.W.,
            Berrow,N.S., Stammers,D.K., Saunders,N.J. and Owens,R.J.
  TITLE     The structure and transcriptional analysis of a global regulator
            from Neisseria meningitidis
  JOURNAL   J Biol Chem 282 (19), 14655-14664 (2007)
   PUBMED   17374605
REFERENCE   2  (residues 1 to 153)
  AUTHORS   Kyrpides,N.C. and Ouzounis,C.A.
  TITLE     The eubacterial transcriptional activator Lrp is present in the
            archaeon Pyrococcus furiosus
  JOURNAL   Trends Biochem Sci 20 (4), 140-141 (1995)
   PUBMED   7770911
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013224.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01037.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..153
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /calculated_mol_wt=17683
     Region          1..149
                     /region_name="PRK11179"
                     /note="DNA-binding transcriptional regulator AsnC;
                     Provisional"
                     /db_xref="CDD:183019"
ORIGIN      
        1 msknyeidni dlkilnllmd dakipyteva kkvfvsggtv hvrmkkleem gvvrgttlqm
       61 dysklgydvt cfmgiflqks slydqvveql rkipeivkvh yttgnynifi kihckdtkhl
      121 kdvlhdkiqk vegiertetf isleeslnrh lqf
//
LOCUS       WP_258105578             147 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6265 family protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258105578
VERSION     WP_258105578.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039391.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19780.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..147
                     /product="DUF6265 family protein"
                     /calculated_mol_wt=16992
     Region          27..130
                     /region_name="DUF6265"
                     /note="Domain of unknown function (DUF6265); pfam19780"
                     /db_xref="CDD:466183"
ORIGIN      
        1 mrsyllvfvt lltfscteke sldqfywmeg lwlkddpdsm lysceswtki tpfemsgfgm
       61 tldsgdtify eelqiisgqs diyyiadvgd gpvsfkltqv esdrwvfenp ehdfpqrivy
      121 tktdstmtay teaaqvsipf rfkrake
//
LOCUS       WP_258105650            1098 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258105650
VERSION     WP_258105650.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 1098)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..1098
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=118965
     Region          46..334
                     /region_name="GH43_Arb43a-like"
                     /note="Glycosyl hydrolase family 43 protein such as
                     Bacillus subtilis subsp. subtilis str. 168
                     endo-alpha-1,5-L-arabinanase Arb43A; cd08998"
                     /db_xref="CDD:350112"
     Site            order(46..48,64..65,113,175,195..196,234,254,262)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:350112"
     Region          373..506
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cd00161"
                     /db_xref="CDD:467293"
     Site            order(387..389,400,402,410..411)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(436..437,447,449,457..458)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Site            order(482..484,494,496,503..504)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
     Region          527..600
                     /region_name="Cadherin-like"
                     /note="Cadherin-like beta sandwich domain; pfam12733"
                     /db_xref="CDD:403821"
     Region          640..797
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          830..899
                     /region_name="Cadherin-like"
                     /note="Cadherin-like beta sandwich domain; pfam12733"
                     /db_xref="CDD:403821"
     Region          1027..1093
                     /region_name="Por_Secre_tail"
                     /note="Secretion system C-terminal sorting domain;
                     pfam18962"
                     /db_xref="CDD:436869"
ORIGIN      
        1 mktpklypfn pksqklvfek kiralltfia fiiyltsqaq nwpagihdps siikdkdkyw
       61 ifatgdgiaa kysydmvtwl dgpspfpnge ypswidtytn npagpgsftg hfwapdiiym
      121 ngkyylyysa svwgttfsci gvvvnetldp edpnyewvdq gdigiyspra gfdinaidaa
      181 mmrgpdnriw mtygsfnkdg ilvtevdsis gqpigntisv ansytgngay gegeggsmfy
      241 rdgyyyliyd kggccngias tyymvigrsv spfgpftdkd gnpmrvesap sggtlffehd
      301 dsrglddryy gpghfglyre ngvdyvsfhy yspngyypse eanymggptl ghamlewged
      361 gwptlsmdfl kagvyslene nsskaldlen hntssgtity qydvnpnqst qkwrftplgt
      421 geytiqsyad etkyleavgt nndtdiqlts nytgtinqkw rvvkdandql iiypsskdvm
      481 meipfaqtad apvtlfvntn hpcqrwtvse flpdtptlsk lttsngtlvp nfdpdifnyt
      541 vyaakgassv tltptpadns ftitengasn gvvdissgeq tatfdlttsi ntnstytitv
      601 vpvalkhsys fesdasdqvg sahgslagsa tisngalild aegdyanlda atiaintyqs
      661 ttlelfvktg advgcsmalf mgdinliwme gndylmtsas ncsdisysci qqgdaypwtt
      721 elgvfgpalg enemhhlvtv irgeslrfyv dgdelgfipl ddsrqlsnvs nnhaflgksg
      781 yfndptwlge ihefniyagq vdaasirqsa dgflmpavss ladmsfevgs lspsfdpaih
      841 sytvslpagt asvqptvitt staaivngdd pvdvssgsgt stivvtsfdg sssttytvny
      901 svinnttihv egiidgtinl grgkkkgfae vtvfdnngsa vpsvtvdgtf igtfnesisg
      961 vtgtdgkvyf atsgeatgsv nidfcvdnlt hqvfsydpnn nnltcasegg arksehvlan
     1021 sapfkfypnp stnyltieip vftgseiisi tdlsgivrgr knasstiesl dvsdlsagiy
     1081 iisvtgqeyk sqefmikh
//
LOCUS       WP_258105652             291 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258105652
VERSION     WP_258105652.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 291)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..291
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=33621
     Region          12..288
                     /region_name="PRK03204"
                     /note="haloalkane dehalogenase; Provisional"
                     /db_xref="CDD:179554"
ORIGIN      
        1 mnatiiaqpw vdtdlypfds kylrleagnm hyvdegqgev ilfihgtptw sflyrdfika
       61 fssnyrciai dhlgfglsek qedtlgtpef hsqnlaefiq kldlknitlv vhdfggpigl
      121 gagiqhsdri kkvilfntwl wstkelkean kinkivnsgl gkflylrlnf spkvllkkgf
      181 sdkkklsgkv hqqyihpfpd kasrqpllql akalvgssdw yqqqweqldq lenkewlilw
      241 gskdefitte fllkwknrlp qaqvtelpyg hfvqeeqtee aigmmqefle r
//
LOCUS       WP_258105672             559 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258105672
VERSION     WP_258105672.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 559)
  AUTHORS   Mande,S.S., Sarfaty,S., Allen,M.D., Perham,R.N. and Hol,W.G.
  TITLE     Protein-protein interactions in the pyruvate dehydrogenase
            multienzyme complex: dihydrolipoamide dehydrogenase complexed with
            the binding domain of dihydrolipoamide acetyltransferase
  JOURNAL   Structure 4 (3), 277-286 (1996)
   PUBMED   8805537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07992.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..559
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=61362
     Region          17..437
                     /region_name="Pyr_redox_2"
                     /note="Pyridine nucleotide-disulphide oxidoreductase;
                     cl39093"
                     /db_xref="CDD:476868"
     Region          459..546
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            513
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238782"
ORIGIN      
        1 mkrkriiiig glsagpsaaa karrldenae illfektahi syatcgipya lsgkiktrdk
       61 llvvhpdllr krfkvdlyln epvieidptd hivytnlgqy tydklilatg srailppiqg
      121 inefqnwaha ktiedfdrvm krgvldtsmh itivgaglig letaenlida gkkvtviela
      181 dnvlsnwdek fatmtetilq sngidlrtgv svkavdprtq elllsngdrl ytdfmfvgis
      241 vkpntemlts kgaehlpnga livdekmqts ipdiyaagdc asikdqvaqk mgwfpmgths
      301 nkggrtagsq avgqvanfkg gygtaimklf dhtiartgmg ikalkanhid fqstfivaat
      361 tpsfypdpkd lfleiyfepk tgkllgaemi gefgvdkrvd vlstaiyagl tiydlpnldl
      421 ayappyspak dpvivagyva qntqrgwyra lnvleaekei nsinpneitl ldvrnpselh
      481 ragkienain iplddlrdri deiderkpvy iycakglrgy lasmilhhng fekitnvagg
      541 ftawnkivgk vevlevpas
//
LOCUS       WP_258105684             122 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Marinoscillum sp.
            MHG1-6].
ACCESSION   WP_258105684
VERSION     WP_258105684.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13407.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..122
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=13950
     Region          26..>122
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mgrffillfi iiafcscree ekvvykigfs qcivdvwrea myqemrrell fhddmeiiyr
       61 dagadnakqi ghiqgmldeg idllivspne papispmiek vynmgipvil ldrkisgehf
      121 na
//
LOCUS       WP_258105686              89 aa            linear   BCT 02-MAR-2025
DEFINITION  GH32 C-terminal domain-containing protein [Marinoscillum sp.
            MHG1-6].
ACCESSION   WP_258105686
VERSION     WP_258105686.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 89)
  AUTHORS   Alberto,F., Bignon,C., Sulzenbacher,G., Henrissat,B. and Czjzek,M.
  TITLE     The three-dimensional structure of invertase (beta-fructosidase)
            from Thermotoga maritima reveals a bimodular arrangement and an
            evolutionary relationship between retaining and inverting
            glycosidases
  JOURNAL   J Biol Chem 279 (18), 18903-18910 (2004)
   PUBMED   14973124
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019849.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08244.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..89
                     /product="GH32 C-terminal domain-containing protein"
                     /calculated_mol_wt=10128
     Region          <6..86
                     /region_name="SacC"
                     /note="Sucrose-6-phosphate hydrolase SacC, GH32 family
                     [Carbohydrate transport and metabolism]; COG1621"
                     /db_xref="CDD:441228"
ORIGIN      
        1 mqnqdrfsfd kttrtlidan alpdndflil lnqntnynir ilienamvnv yvnnevalsn
       61 qiykatgtnw rifadnrnat fsninvcvl
//
LOCUS       WP_258105690             744 aa            linear   BCT 02-MAR-2025
DEFINITION  GH32 C-terminal domain-containing protein [Marinoscillum sp.
            MHG1-6].
ACCESSION   WP_258105690
VERSION     WP_258105690.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 744)
  AUTHORS   Alberto,F., Bignon,C., Sulzenbacher,G., Henrissat,B. and Czjzek,M.
  TITLE     The three-dimensional structure of invertase (beta-fructosidase)
            from Thermotoga maritima reveals a bimodular arrangement and an
            evolutionary relationship between retaining and inverting
            glycosidases
  JOURNAL   J Biol Chem 279 (18), 18903-18910 (2004)
   PUBMED   14973124
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019849.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08244.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..744
                     /product="GH32 C-terminal domain-containing protein"
                     /calculated_mol_wt=83410
     Region          23..643
                     /region_name="SacC"
                     /note="Sucrose-6-phosphate hydrolase SacC, GH32 family
                     [Carbohydrate transport and metabolism]; COG1621"
                     /db_xref="CDD:441228"
     Region          674..744
                     /region_name="Por_Secre_tail"
                     /note="Por secretion system C-terminal sorting domain;
                     TIGR04183"
                     /db_xref="CDD:275036"
ORIGIN      
        1 miryiailgf tifsmhlsaq vryaelyrpq fhatprtgfm gdpngpnkfs dtyhlywwgh
       61 misddmvywq eltsnalkgt psgygnwsgc vavdlentag fntaedtami avytlndnnt
      121 gvqhqaisvs ldqgsfdyyn gnpviqsnqa dfrdpqvfwh eptskwvmvi tkpidraief
      181 ytssdikvws ykskfqgrga rreiwevpdl fqltlngnvn dqrwvltcgm gpnrmqywvg
      241 dfdgtkftla sddnlltgnq ikgdlladfe adytgwtveg tafgsapasg tladqqevmg
      301 ytgyklvnsf lggdgptgkm isddftitkk finlqigggs gsglsfkvis egvelanirs
      361 tgdteilqwr gidlsahagk tahieiedea tggwghilvd hivfsdyeyd trienanwad
      421 wghdfyagks frnydgddtr kiwlawmgnw tyardvptnp wkgcesiprs lslvnegngy
      481 elvqkpivel eklrdvtysk snfsvegtqe itgfqpdwnv yelkvsfkit gdnqvfglnl
      541 aegddhklev rfdthnsvls vnrgtkpfsf aykritetpi iipedsildl hifvdqssve
      601 ilandykvst tslffnlpts tgisifsdng lvqvpefqaw slksiwgisv edmvlpedpg
      661 tgtplgldqk kkliypnpvr rgeklilgnp eteevklfdl sgqiqpirki qndqfiipee
      721 vspgvyfllv rnadsvvkkk livr
//
LOCUS       WP_258105699             696 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Marinoscillum sp.
            MHG1-6].
ACCESSION   WP_258105699
VERSION     WP_258105699.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..696
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=80912
     Region          <5..104
                     /region_name="AraC"
                     /note="AraC-type DNA-binding domain and AraC-containing
                     proteins [Transcription]; COG2207"
                     /db_xref="CDD:441809"
     Region          147..282
                     /region_name="TolBN"
                     /note="TolB amino-terminal domain (function unknown)
                     [Signal transduction mechanisms]; COG5616"
                     /db_xref="CDD:444347"
     Region          461..678
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Site            order(549..550,552,575,581..582,585..586,588..589,612,
                     617..618,621..622,625)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          573..606
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          611..640
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mstpdqlisq lneqveanlq neqfgvdela qsvdmsrstl hrklheltgq sisqfireyr
       61 lersldllqn enltasevah rvgfgsatyf sksfheffgf tpgeakdgki perkhstsan
      121 krktpllgig vliivvitag yfafsdstsk pvqeleksia ilpfrndshd ssnvyivngl
      181 mesilnnlal iedlrvisrt svekyrnqmn skiiteigke lnvsyivegs gqkygnemll
      241 tvqlievpte rhlwskqykr qanniidlqi evaksiarei eaivtedeqe lleklpttne
      301 qaydyylkgn eivfayerwt aqydtielkk areyfrkaie vdntyalaya klsltcyhln
      361 watndryahe mksasemaml ydpelaesli akshslhfef vrdtirtrds vhlelmygyi
      421 ekatkvgpdn ilalriardi sswdrpnlky qlefalrslk leidkdtsel indyfglprs
      481 frvagffdra qeaisimeel taeghvarvi eqteliadkr sdykecasil qeavserpnn
      541 relnrflaqa yffmerydda yeyyqkieyd ievylaygdy nriaficekl gfidkskkyy
      601 algmeryegl peaykyfnqt elysalndke kaiksleaal nqefipywni rfikdspiyg
      661 emrknpefik llermeekfw kkhdeiekdl meksll
//
LOCUS       WP_258105734             138 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258105734
VERSION     WP_258105734.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 138)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..138
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=15881
     Region          8..137
                     /region_name="REC"
                     /note="phosphoacceptor receiver (REC) domain of response
                     regulators (RRs) and pseudo response regulators (PRRs);
                     cl19078"
                     /db_xref="CDD:473134"
     Site            order(113..116,118)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381085"
ORIGIN      
        1 mkqklncvll idddeatnfl hellisecei tnkiikaeng vealdyltnk vngrypkpdl
       61 ifvdinmplm ngwgfleeye kleltqkgri vvvmlttsln pedkdkaqei lairdykskp
      121 ltvdmlneil qthfkewl
//
LOCUS       WP_258105741             103 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF7009 family protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258105741
VERSION     WP_258105741.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046888.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22668.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..103
                     /product="DUF7009 family protein"
                     /calculated_mol_wt=11334
ORIGIN      
        1 mklqitdqql nlqlkrdeie dlkegfplsv nvsfglalap fscelkacyd dglysvdfsk
       61 gtisikapma lvsawadtes nslefnirte aretlgviie kay
//
LOCUS       WP_258105975             211 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: putative metallopeptidase [Klebsiella pneumoniae
            complex].
ACCESSION   WP_258105975
VERSION     WP_258105975.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae complex
  ORGANISM  Klebsiella pneumoniae complex
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039181.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18894.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Klebsiella pneumoniae complex"
                     /db_xref="taxon:3390273"
     Protein         1..211
                     /product="putative metallopeptidase"
                     /EC_number="3.4.24.-"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=23621
     Region          34..189
                     /region_name="PhageMetallopep"
                     /note="Putative phage metallopeptidase; pfam18894"
                     /db_xref="CDD:465902"
ORIGIN      
        1 magngnrrpy ppvnftgenw lpytrlipat eigewvnqni ltedgrihnp dhahlldadv
       61 afmwasgsfa ksgrivlgqc eqvmmraggw qksrmeqqmh ewfgripkfi itlaadyceq
      121 cddlefcalv ehelyhiaqa tddygapkfn ketgmpvlkl rghdveefvg vvrrygaskd
      181 vqemvdaanr paevahidva racgtcmlkl a
//
LOCUS       WP_258105978             229 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: bacteriophage antitermination protein Q [Klebsiella
            pneumoniae complex].
ACCESSION   WP_258105978
VERSION     WP_258105978.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae complex
  ORGANISM  Klebsiella pneumoniae complex
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Goliger,J.A. and Roberts,J.W.
  TITLE     Bacteriophage 82 gene Q and Q protein. Sequence, overproduction,
            and activity as a transcription antiterminator in vitro
  JOURNAL   J Biol Chem 262 (24), 11721-11725 (1987)
   PUBMED   3624233
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018074.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06323.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Klebsiella pneumoniae complex"
                     /db_xref="taxon:3390273"
     Protein         1..229
                     /product="bacteriophage antitermination protein Q"
                     /calculated_mol_wt=26083
     Region          5..220
                     /region_name="Phage_antiter_Q"
                     /note="Phage antitermination protein Q; pfam06323"
                     /db_xref="CDD:428887"
ORIGIN      
        1 mtaqylefvr qqlivatadl sgatkgqlva faenaqftat arsrgrkkvy sevkqkmvnp
       61 dgppmsgsqs rakgssialv lpveystasw rrallsledh qkawllwnys dnirwehqet
      121 itrwaweqfs eklagvriak ktvdrlrqli wlaaqdvkae lagretyeyq klaalvgvtp
      181 knwsetfter weemkttlrr ldsdsllqvt rsrsqqkatn fdsilakld
//
LOCUS       WP_258106027             350 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Vibrio jasicida].
ACCESSION   WP_258106027
VERSION     WP_258106027.1
KEYWORDS    RefSeq.
SOURCE      Vibrio jasicida
  ORGANISM  Vibrio jasicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 350)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Vibrio jasicida"
                     /db_xref="taxon:766224"
     Protein         1..>350
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          1..>339
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 mrlflcekps qgrdianvlg chekidgalr gngdvvtwaf ghllsqadpe hydaslsgaw
       61 syeqlpivps qwqmvvpsdk kkqfnvikkl lascrevvia tdadregevi areildyvgy
      121 tgrvsrlwls aldeasirkg laslrpgseh eplywaglgr sqadwllgmn ltrlcsiagr
      181 evgyrgalsv grvqtptlrl vverdvaian fvskpfydvv akagfdakwq vpealgdesg
      241 rclsrdaasq vaaqcqgqpa vvsafdtkrq kakhpalffl gtlqktmsaq yghtaqqvld
      301 taqalyekhk lttyprtdca flptsqqgev sqvvnalsse safasmchga
//
LOCUS       WP_258106043             224 aa            linear   BCT 02-MAR-2025
DEFINITION  phospholipase D-like domain-containing protein [Vibrio jasicida].
ACCESSION   WP_258106043
VERSION     WP_258106043.1
KEYWORDS    RefSeq.
SOURCE      Vibrio jasicida
  ORGANISM  Vibrio jasicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13091.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Vibrio jasicida"
                     /db_xref="taxon:766224"
     Protein         1..224
                     /product="phospholipase D-like domain-containing protein"
                     /calculated_mol_wt=25028
     Region          129..>224
                     /region_name="PLDc_Nuc_like_unchar2"
                     /note="Putative catalytic domain of uncharacterized
                     hypothetical proteins closely related to Nuc, an
                     endonuclease from Salmonella typhimurium; cd09174"
                     /db_xref="CDD:197271"
     Site            216
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197271"
ORIGIN      
        1 mklsdfsiea lkgfvtgdds dapymsgpdl vkffnlfgvr dvysfqnggl pesasrkdya
       61 lktvkslngt nqmklmvegl vdsrrsenyt elavgineii khdgysleqn slgvfivsgc
      121 niedstvdve ayfqeirqri lesilqakfs iwvamawftd keignallnk hrdglniqvi
      181 vnddsttsky gldfsskgie yykiapsspw gkkimhnkfc vidf
//
LOCUS       WP_258106049             886 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase family protein [Vibrio jasicida].
ACCESSION   WP_258106049
VERSION     WP_258106049.1
KEYWORDS    RefSeq.
SOURCE      Vibrio jasicida
  ORGANISM  Vibrio jasicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04851.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Vibrio jasicida"
                     /db_xref="taxon:766224"
     Protein         1..886
                     /product="DEAD/DEAH box helicase family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=100727
     Region          14..>225
                     /region_name="SSL2"
                     /note="Superfamily II DNA or RNA helicase [Transcription,
                     Replication, recombination, and repair]; COG1061"
                     /db_xref="CDD:440681"
     Region          <508..551
                     /region_name="SF2_C"
                     /note="C-terminal helicase domain of superfamily 2
                     DEAD/H-box helicases; cd18785"
                     /db_xref="CDD:350172"
     Site            order(548,551)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350172"
ORIGIN      
        1 mqpfetmkfr htwrpyqarv idavhehldd krlhvvaapg agkttlglei frllgkptlv
       61 lsptrvirdq wierlqdfte deapidwvsd slnspkvlts ityqslhanl rrnedspseg
      121 ddeeslpsee qsleesevdc fiqtikahni qvlildeahh lrsewwkale rvcqifpdlv
      181 lvsltatppy dsqdkewqry eqlcgpidee isvpelvkag tlcphqdfvw icqlserekq
      241 rvqeydarvs alcttlfdsp qfedvvlshp wlsqqrnese itkdpqaaia llvfikaksl
      301 prngglmtql dmrteeiptl grrwwqvlie ntlfskttqf teeqqkfvde lkkqlrasel
      361 lrkrelsler errierslsl ssskigacaa ihkieykyrk salrqvvltd yirdeqhnsh
      421 vdtgeinlga lpvfeqlvss saipdqvgll tgrisviptr klplllrvie sknvttepfd
      481 qkgkyqkvsa psnaltaaft tllmqgdikv lvgtrallge gwdapainsl vlastvgsfm
      541 ltnqmrgrai rvdpnskgki ssiwhlaavs tklasgisdy ynlrqrfdtf vglsekelti
      601 esgyerirld esrslkphpn nnlrmlrrfr rlslvaerwh kavttddtvr vipsvqvnkt
      661 prlrayllnn sfsflitqlv lsfistvtgi larvrpdsis tfflllgvas ffgflynlpk
      721 titavkvvir ylppdgalkq igkavaealc etgfiktase rlkvhvfklp tgefyislsg
      781 ctfyesslfs ncirevlapi espryilars gasfglsked yhavpmqfav kkklaqvfye
      841 swqkhvcmse liytrtgegr kkllkaqana fssifenevk rqdrwq
//
LOCUS       WP_258106091              81 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Vibrio jasicida].
ACCESSION   WP_258106091
VERSION     WP_258106091.1
KEYWORDS    RefSeq.
SOURCE      Vibrio jasicida
  ORGANISM  Vibrio jasicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024908.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13518.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Vibrio jasicida"
                     /db_xref="taxon:766224"
     Protein         1..81
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=9353
     Region          14..>68
                     /region_name="transpos_ISNCY_2"
                     /note="ISNCY family transposase; NF033594"
                     /db_xref="CDD:468103"
ORIGIN      
        1 mlltmstkel kkleliqhvc dkrirqidaa qalklsrrqi qrlvnlfref gpqglvskkr
       61 tqpgnhqywg stpepqners l
//
LOCUS       WP_258106073             362 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Vibrio jasicida].
ACCESSION   WP_258106073
VERSION     WP_258106073.1
KEYWORDS    RefSeq.
SOURCE      Vibrio jasicida
  ORGANISM  Vibrio jasicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 362)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Vibrio jasicida"
                     /db_xref="taxon:766224"
     Protein         <1..362
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          <1..316
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 daalqsacwn dkkvaqsshh aivptaktpk laelsererh vyiavvqryl aqfypyaedd
       61 atsielqcgv hrfkasgkve rvkgwrvvig gdeekgkdeg kgkreasanq tlpsltigqs
      121 vtlsdvnvvd kkttppaaft egtlldaman iarsdnipaq fkailketag lgtqatraai
      181 ietlkkrgfi eakgkkllst aagrgviqal pnevsnpvmt avweqalegi anktttleaf
      241 mqnqegfvra iiskvksgel qinlpkvvep tapcplcgkt mrlrhgkkpf waceerdqcg
      301 lildsvrgkp aknqkcacgk gvlvrksgks kgsfywscsa wkqgcqkrhf ddkgklgkei
      361 gg
//
LOCUS       WP_258106083             349 aa            linear   BCT 02-MAR-2025
DEFINITION  outer membrane beta-barrel protein [Vibrio jasicida].
ACCESSION   WP_258106083
VERSION     WP_258106083.1
KEYWORDS    RefSeq.
SOURCE      Vibrio jasicida
  ORGANISM  Vibrio jasicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024895.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13505.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Vibrio jasicida"
                     /db_xref="taxon:766224"
     Protein         1..349
                     /product="outer membrane beta-barrel protein"
                     /calculated_mol_wt=38527
     Region          43..339
                     /region_name="PRK10808"
                     /note="outer membrane protein A; Reviewed"
                     /db_xref="CDD:236764"
ORIGIN      
        1 mkykllaslm lmalsmpila qdapepkeke aeslpllqsp hfylggrlgw gyfqdacdsn
       61 seachddtfg ggvyagyqfn dwfaleggvt dygkpdaryt agsvsadtyg aelsaklsyr
      121 lssewalfsr igaayqdiek qsdwdgkqts qdwntlvavg vdyrlsqrws lrgeyqfidg
      181 igdgevlqsd lhftslglty hfgqenppvv vapapppepe ptlvtetvsl dasaffdfds
      241 seliynadle alavqltegs qgniridght dslgsleynq rlseqraqav aeyfkrmgva
      301 esrlivegkg enspvannet kegraqnrrv eihfeaqeer avenneevk
//
LOCUS       WP_258105726             272 aa            linear   BCT 02-MAR-2025
DEFINITION  c-type heme family protein [Marinoscillum sp. MHG1-6].
ACCESSION   WP_258105726
VERSION     WP_258105726.1
KEYWORDS    RefSeq.
SOURCE      Marinoscillum sp. MHG1-6
  ORGANISM  Marinoscillum sp. MHG1-6
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Reichenbachiellaceae; Marinoscillum.
REFERENCE   1  (residues 1 to 272)
  AUTHORS   Motomura,T., Suga,M., Hienerwadel,R., Nakagawa,A., Lai,T.L.,
            Nitschke,W., Kuma,T., Sugiura,M., Boussac,A. and Shen,J.R.
  TITLE     Crystal structure and redox properties of a novel cyanobacterial
            heme protein with a His/Cys heme axial ligation and a Per-Arnt-Sim
            (PAS)-like domain
  JOURNAL   J Biol Chem 292 (23), 9599-9612 (2017)
   PUBMED   28428249
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023273.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11845.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Marinoscillum sp. MHG1-6"
                     /db_xref="taxon:2959627"
     Protein         1..272
                     /product="c-type heme family protein"
                     /calculated_mol_wt=29605
     Region          41..188
                     /region_name="DUF3365"
                     /note="Protein of unknown function (DUF3365); pfam11845"
                     /db_xref="CDD:432123"
ORIGIN      
        1 mktlskrtkl tyfgglllaa msctplpeet aseasdkmys ieeafeivaa endvartlyt
       61 kaivgagkkq glkfhedwek deveagplpa lflrgiagdi rkkgevplgl flgsdfpvrk
      121 snkfvgkqae lfaairedgk pkyfydeenq lytamfpdfa aaapcvnchn ehpettktdw
      181 algdimgatt wtypsdsvsf delqgiimay rdgaaatfqt yldkaagfke sdvpavgatw
      241 pvggyslptp dvfldsvnel asektlkgil ki
//
LOCUS       WP_258106106             324 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA topoisomerase, partial [Vibrio jasicida].
ACCESSION   WP_258106106
VERSION     WP_258106106.1
KEYWORDS    RefSeq.
SOURCE      Vibrio jasicida
  ORGANISM  Vibrio jasicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 324)
  AUTHORS   Lima,C.D., Wang,J.C. and Mondragon,A.
  TITLE     Three-dimensional structure of the 67K N-terminal fragment of E.
            coli DNA topoisomerase I
  JOURNAL   Nature 367 (6459), 138-146 (1994)
   PUBMED   8114910
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01131.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Vibrio jasicida"
                     /db_xref="taxon:766224"
     Protein         1..>324
                     /product="DNA topoisomerase"
                     /EC_number="5.6.2.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006265 - DNA topological change [Evidence
                     IEA]"
     Region          <2..324
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 myekhkltty prtdcaflpt sqqgevsqvv nalssesafa smchgadaal qsacwndkkv
       61 aqsshhaivp taktpklael sererhvyia vvqrylaqfy phaeddatsi elqcgvhrfk
      121 asgkvervkg wrvvtcgdee kgkdegkgkr easanqtlps ltigqsvtls dvnvvdkktt
      181 ppaaftegtl ldamaniars dnipaqfkai lketaglgtq atraaiietl kkrgfieakg
      241 kkllstaagr gviqalpnev snpvmtavwe qalegianqt ttleafmqnq egfvraiisk
      301 vksgelqinl pkvveptapc plcg
//
LOCUS       WP_258106203            1076 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase family 39 protein [Christensenella minuta].
ACCESSION   WP_258106203
VERSION     WP_258106203.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024629.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13231.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..1076
                     /product="glycosyltransferase family 39 protein"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=122327
     Region          73..296
                     /region_name="COG5542"
                     /note="Mannosyltransferase related to Gpi18 [Carbohydrate
                     transport and metabolism]"
                     /db_xref="CDD:444286"
     Region          <509..591
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
     Region          637..1072
                     /region_name="PMT1"
                     /note="Dolichyl-phosphate-mannose--protein O-mannosyl
                     transferase [Posttranslational modification, protein
                     turnover, chaperones]; COG1928"
                     /db_xref="CDD:441531"
ORIGIN      
        1 meaqnelivw ftvlgviflf liaylyygkk trnpfeqpvs agmifalfai iallvrlvla
       61 ystpgyatdl dcfkawanys ytgglenfyt sdffadyppv yiyvlyffgf lqntfslnlg
      121 gpefalmihl pavccdilaa yivyrlarkk frpntallls vlillnpavi fnssiwgqvd
      181 iivtlmmilv iyllvknkpi wasaafmaaf llkpqaimif pvlafvlirn iivsenrkkd
      241 vlnllisigv maglfflipl pfagsqeplw lvkqfistvg qydqaslnaf nlfallgqnf
      301 isssqavflg ltadiwgfil ialvcayslf lyirnpkkef lfalaaliim gvfalghgmh
      361 drylfpvpil llfafiftkd krlvwpvilt fialllnqsl slyyyqvmip lawtigvsav
      421 smavfiytgy vitklalgpv qekredsdis ametlekppa qlrlenfeek rtlnkkdgll
      481 mlvisaiyal vaftnlgsfq ipetpaqlek epviaefaae qqistveyya gygeanfefy
      541 ysadgmtytp vvlekggktv seiehkfanm ykwqiyttdi dakyikvvpl sgslpileva
      601 fkdaqgnllq pqdtspssaq vlfdeqslvp aestymtdfy fdeiyhvrta yenihgiepy
      661 eithpplgkl ilacgiqlfg mnpfgwrfmg tltgvlmlpv lyifakmlfk kskyaaisai
      721 lfavdfmhfa qtrigtidsy silwimlmyl fmyqftqsnf nkqkisktli plalsglffg
      781 igaatkwlci yagaglavif fmtlykryke yrfakekllv hetgaaadtg gldhyrsivk
      841 kykinialil cwcvlffiiv paviyiasyy pytivtqgea yrfinpgnlk ehhsivgnqf
      901 ymlnyhstln pdhvhpfssm wyswpvdvrp vlffnghndl nhttstlstm gnpliwwagv
      961 vasfwlvids argkhrnygv tftaiaalsq fmpwwfvtre vfiyhyfatv pfliilivyw
     1021 lkniesdfry gkqfmwgfvi acgvmfavfy pvitgipfdt dyitalrwlp swpfyg
//
LOCUS       WP_258106103             182 aa            linear   BCT 02-MAR-2025
DEFINITION  toprim domain-containing protein, partial [Vibrio jasicida].
ACCESSION   WP_258106103
VERSION     WP_258106103.1
KEYWORDS    RefSeq.
SOURCE      Vibrio jasicida
  ORGANISM  Vibrio jasicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 182)
  AUTHORS   Aravind,L., Leipe,D.D. and Koonin,E.V.
  TITLE     Toprim--a conserved catalytic domain in type IA and II
            topoisomerases, DnaG-type primases, OLD family nucleases and RecR
            proteins
  JOURNAL   Nucleic Acids Res 26 (18), 4205-4213 (1998)
   PUBMED   9722641
REFERENCE   2  (residues 1 to 182)
  AUTHORS   Szafranski,P., Smith,C.L. and Cantor,C.R.
  TITLE     Cloning and analysis of the dnaG gene encoding Pseudomonas putida
            DNA primase
  JOURNAL   Biochim Biophys Acta 1352 (3), 243-248 (1997)
   PUBMED   9224947
REFERENCE   3  (residues 1 to 182)
  AUTHORS   Bergerat,A., de Massy,B., Gadelle,D., Varoutas,P.C., Nicolas,A. and
            Forterre,P.
  TITLE     An atypical topoisomerase II from Archaea with implications for
            meiotic recombination
  JOURNAL   Nature 386 (6623), 414-417 (1997)
   PUBMED   9121560
REFERENCE   4  (residues 1 to 182)
  AUTHORS   Versalovic,J. and Lupski,J.R.
  TITLE     The Haemophilus influenzae dnaG sequence and conserved bacterial
            primase motifs
  JOURNAL   Gene 136 (1-2), 281-286 (1993)
   PUBMED   8294018
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013878.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01751.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Vibrio jasicida"
                     /db_xref="taxon:766224"
     Protein         <1..>182
                     /product="toprim domain-containing protein"
     Region          1..>181
                     /region_name="PRK07726"
                     /note="DNA topoisomerase 3"
                     /db_xref="CDD:236078"
ORIGIN      
        1 cekpsqgrdi anvlgcheki dgalrgngdv vtwafghlls qadpeyydas lsgawsyeql
       61 pivpsqwqmv vpsdkkkqfn vikkllascs evviatdadr egeviareil dyvgytgrvs
      121 rlwlsaldea sirkglaslr pgseheplyw aglgrsqadw llgmnltrlc siagrevgyr
      181 ga
//
LOCUS       WP_258106244             128 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4368 domain-containing protein [Christensenella minuta].
ACCESSION   WP_258106244
VERSION     WP_258106244.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025645.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14287.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..128
                     /product="DUF4368 domain-containing protein"
                     /calculated_mol_wt=14597
     Region          41..100
                     /region_name="DUF4368"
                     /note="Domain of unknown function (DUF4368); pfam14287"
                     /db_xref="CDD:433840"
ORIGIN      
        1 mtgkisderf akmaasyeqq qaviaekvka lqkelervsc kagtaehfvk tvrkytrark
       61 ltqamlyeli dkievfhaek idgkrvqrlr ifyhcigeid ipelpevdfe irtrkgvtis
      121 yagaheai
//
LOCUS       WP_258106316             305 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Christensenella minuta].
ACCESSION   WP_258106316
VERSION     WP_258106316.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 305)
  AUTHORS   Yeo,C.C. and Poh,C.L.
  TITLE     Characterization of IS1474, an insertion sequence of the IS21
            family isolated from Pseudomonas alcaligenes NCIB 9867
  JOURNAL   FEMS Microbiol Lett 149 (2), 257-263 (1997)
   PUBMED   9141667
REFERENCE   2  (residues 1 to 305)
  AUTHORS   Solinas,F., Marconi,A.M., Ruzzi,M. and Zennaro,E.
  TITLE     Characterization and sequence of a novel insertion sequence,
            IS1162, from Pseudomonas fluorescens
  JOURNAL   Gene 155 (1), 77-82 (1995)
   PUBMED   7698671
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01695.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..305
                     /product="ATP-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=34416
     Region          31..305
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            175..182
                     /site_type="other"
                     /note="Walker A motif"
                     /db_xref="CDD:99707"
     Site            order(176..183,234,269)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:99707"
     Site            230..235
                     /site_type="other"
                     /note="Walker B motif"
                     /db_xref="CDD:99707"
     Site            284
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:99707"
ORIGIN      
        1 manktvidll edfsfrhaki dqenerrmks daqimgleeq krallaeklk raflaedatg
       61 fdaeimeler rqeeiarkkg lmvpyacaac rdtglvgrky ctcflrevyq tiygavdvdt
      121 vaecfgradm svfdgkkela mgrtqrslae laygickkyv dsfpqtprln lllrgkaglg
      181 ksyllrciaa aarekgvdvc liragelfga ffrhrmgeem plsflqdaql lliddlgtep
      241 mtqnvtteyl fdllnrriea grhtavatnv edlqaryger issrlesrec avlmldgedl
      301 rlrra
//
LOCUS       WP_258106347             513 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6034 family protein [Christensenella minuta].
ACCESSION   WP_258106347
VERSION     WP_258106347.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039328.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19499.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..513
                     /product="DUF6034 family protein"
                     /calculated_mol_wt=57265
     Region          1..510
                     /region_name="DUF6034"
                     /note="Family of unknown function (DUF6034); pfam19499"
                     /db_xref="CDD:437331"
ORIGIN      
        1 mkkrlnticv calcaaflla gcqatpekra vvqknngsfe ktagetaglp yeaparyene
       61 lagaagvsir faadvempgl saypvysvrp alftqeqvdr vldvlleget lyedntqqrs
      121 rdeiqhdidy ytkeleacgd npefaaaaet ykqwlkdfmi eyenapeqld lkeaertlkf
      181 nendpnivmf ygeqqpmene geyqtvlted gkkraeaagn acvtgvfwke iggmptkmrf
      241 vasnhmtgmg nglesnlyce pyasgipqvp asltqedaek iaqdaleqmg idavlisaqr
      301 dvildweete dgafgftdrg aacytvtfkh nvpgtlqrgv spanqyaeey dfaaripnet
      361 itvrvngdgi vgflwnnpme vvavenentp llpfeevsqr meeqikntta slsmgdpesd
      421 gqrilvdrit lsylmtrkpd npdeyyfvpv wdacgnifyh ypddypdnts nhyvvdenre
      481 raeynmdeiw gqqpvslvtl naadgsvinr ays
//
LOCUS       WP_258106352             161 aa            linear   BCT 02-MAR-2025
DEFINITION  flavodoxin [Christensenella minuta].
ACCESSION   WP_258106352
VERSION     WP_258106352.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024094.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12682.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..161
                     /product="flavodoxin"
                     /GO_function="GO:0010181 - FMN binding [Evidence IEA]"
                     /calculated_mol_wt=17187
     Region          1..157
                     /region_name="FMN_red"
                     /note="NADPH-dependent FMN reductase; cl00438"
                     /db_xref="CDD:469770"
ORIGIN      
        1 mkniliayys hsgnteelae lirtetggal feikpvvpyp sayqavvgqa keeiragfrp
       61 eigepadvgp ydvvfvgspn wwstvappva sflercdltg ktvvpfcthg gggmaglard
      121 tkalcpdsev mdgfaaygns vprargevda wlrgiglker r
//
LOCUS       WP_258106368             256 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease [Christensenella minuta].
ACCESSION   WP_258106368
VERSION     WP_258106368.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 256)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01061.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..256
                     /product="ABC transporter permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=27741
     Region          <100..252
                     /region_name="YadH"
                     /note="ABC-type multidrug transport system, permease
                     component [Defense mechanisms]; COG0842"
                     /db_xref="CDD:440604"
ORIGIN      
        1 mkrltlrfvg yelrnaagnw fsvffgvafp ilmslliska fagempveav psfetgvfis
       61 mslivpmatl ligyaanysq elekevplrl rlfgcpegil lgakmlanli fmtaalaiyt
      121 aadllllrie ppaaesvlll vssiyllali lfmlahgiat lfgkfgpaya vtmtlyfgfm
      181 ivcglmgvpv erlpagvqsa asalpmtyig ndfagfwqgg sydfgplils fvilgsisfa
      241 vlllglwkrr rrgfpr
//
LOCUS       WP_258106379             395 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Christensenella minuta].
ACCESSION   WP_258106379
VERSION     WP_258106379.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 395)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 395)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 395)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..395
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=42962
     Region          58..360
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(164,166,169,195)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238347"
ORIGIN      
        1 mkksiailla vlmclslmlt acapqepepa asqepaesas aqpsesaeaa aseeaegtrt
       61 itdhaghevv lpekvervai ggltpltsvy cmfmgssdgl vgihpdskna avnsilgeay
      121 pglkdlpdgw asgddinmee likldpdvvf ynadvtanyd aleaagipav gfsttlfddy
      181 ntidtfnawi elmkevmgps dradgiiayg eevqktvadk laeipeeeyp ntlilsnyne
      241 saitaggtsf anywitstgg knlgydvgaf vgevnmeqiy ewnpdvlfln sfsaytpedl
      301 ynntaadghd wsgikavqdk rvykiplgmy ywfppssdsp lmlqwmakqm ypelfedldi
      361 eqeikdyysg fygleltddq vdlilnptpe saaaf
//
LOCUS       WP_258106391             286 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramoyl-L-alanine amidase [Christensenella minuta].
ACCESSION   WP_258106391
VERSION     WP_258106391.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 286)
  AUTHORS   Kuroda,A., Sugimoto,Y., Funahashi,T. and Sekiguchi,J.
  TITLE     Genetic structure, isolation and characterization of a Bacillus
            licheniformis cell wall hydrolase
  JOURNAL   Mol Gen Genet 234 (1), 129-137 (1992)
   PUBMED   1495475
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013670.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01520.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..286
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /EC_number="3.5.1.28"
                     /GO_function="GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=30508
     Region          3..180
                     /region_name="AmiC"
                     /note="N-acetylmuramoyl-L-alanine amidase [Cell
                     wall/membrane/envelope biogenesis]; COG0860"
                     /db_xref="CDD:440621"
     Region          203..281
                     /region_name="PGRP"
                     /note="Peptidoglycan-binding (PGRP) domain of
                     peptidoglycan hydrolases [Cell wall/membrane/envelope
                     biogenesis]; COG3409"
                     /db_xref="CDD:442635"
ORIGIN      
        1 mskiyinpgh ggadsgavgt ggrrekddvl rlatavshil assghdvrmy rdgdyllels
       61 eitrsanlwg adlfiafhrn dadgkdtqpn gaecgiapka setskrlaaa vqqelvalgf
      121 kdrtsgvgyk vwttrnyvvt rttmpatsie cgfvlnpgdn elfdgkfdli aqgiaaails
      181 iaggvvpntv tppspsanvp elnrvlkygc kggdvrmmqe rlnahkanvg kadgefgdkt
      241 rrglhafqqa rinegrdvgc ryngnkpdgk cgeltwtilh epapge
//
LOCUS       WP_258106447             464 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 N-terminal domain-containing protein
            [Christensenella minuta].
ACCESSION   WP_258106447
VERSION     WP_258106447.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 464)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00933.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..464
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=49867
     Region          141..>464
                     /region_name="BglX"
                     /note="Periplasmic beta-glucosidase and related
                     glycosidases [Carbohydrate transport and metabolism];
                     COG1472"
                     /db_xref="CDD:441081"
ORIGIN      
        1 mkkkvitall cvlllltgct egspdgtaaa ptvvsairds qtgpsfspqp evksaagmvl
       61 aadeesfllk hedgtqqafs ygvedsvlpl vrtvergasv rvaytenggk civqdvqler
      121 eapnppfnly edraaeilqs mtaaekvgqm ffarcpeeda agtaekyqpa gyilfdrdfk
      181 gkskaeviet vksyqqvskl gmligvdeeg gtvkrvskye dlcdgpflsp qelyseggme
      241 rivsdtaeka gvlkglginv nlapvcdvst dpgdfiykra fgqaagetag yvaevvrqmn
      301 esgigctlkh fpgygsnvdt htgiahdtre ydaflnsdfl pfsagikena ggilvchniv
      361 ecmddeypas lsarvheilr sdlgfsgvim tddlymdavr deygageaav lavqagndli
      421 lssqfeeqyq avldalgdgt lredqidkav krvlcwklsl giie
//
LOCUS       WP_258106471             467 aa            linear   BCT 02-MAR-2025
DEFINITION  GntR family transcriptional regulator [Christensenella minuta].
ACCESSION   WP_258106471
VERSION     WP_258106471.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 467)
  AUTHORS   Hillerich,B. and Westpheling,J.
  TITLE     A new GntR family transcriptional regulator in streptomyces
            coelicolor is required for morphogenesis and antibiotic production
            and controls transcription of an ABC transporter in response to
            carbon source
  JOURNAL   J Bacteriol 188 (21), 7477-7487 (2006)
   PUBMED   16936034
REFERENCE   2  (residues 1 to 467)
  AUTHORS   Rigali,S., Nothaft,H., Noens,E.E., Schlicht,M., Colson,S.,
            Muller,M., Joris,B., Koerten,H.K., Hopwood,D.A., Titgemeyer,F. and
            van Wezel,G.P.
  TITLE     The sugar phosphotransferase system of Streptomyces coelicolor is
            regulated by the GntR-family regulator DasR and links
            N-acetylglucosamine metabolism to the control of development
  JOURNAL   Mol Microbiol 61 (5), 1237-1251 (2006)
   PUBMED   16925557
REFERENCE   3  (residues 1 to 467)
  AUTHORS   Gorelik,M., Lunin,V.V., Skarina,T. and Savchenko,A.
  TITLE     Structural characterization of GntR/HutC family signaling domain
  JOURNAL   Protein Sci 15 (6), 1506-1511 (2006)
   PUBMED   16672238
REFERENCE   4  (residues 1 to 467)
  AUTHORS   Rigali,S., Schlicht,M., Hoskisson,P., Nothaft,H., Merzbacher,M.,
            Joris,B. and Titgemeyer,F.
  TITLE     Extending the classification of bacterial transcription factors
            beyond the helix-turn-helix motif as an alternative approach to
            discover new cis/trans relationships
  JOURNAL   Nucleic Acids Res 32 (11), 3418-3426 (2004)
   PUBMED   15247334
  REMARK    Publication Status: Online-Only
REFERENCE   5  (residues 1 to 467)
  AUTHORS   Lee,M.H., Scherer,M., Rigali,S. and Golden,J.W.
  TITLE     PlmA, a new member of the GntR family, has plasmid maintenance
            functions in Anabaena sp. strain PCC 7120
  JOURNAL   J Bacteriol 185 (15), 4315-4325 (2003)
   PUBMED   12867439
REFERENCE   6  (residues 1 to 467)
  AUTHORS   Rigali,S., Derouaux,A., Giannotta,F. and Dusart,J.
  TITLE     Subdivision of the helix-turn-helix GntR family of bacterial
            regulators in the FadR, HutC, MocR, and YtrA subfamilies
  JOURNAL   J Biol Chem 277 (15), 12507-12515 (2002)
   PUBMED   11756427
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012610.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00392.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..467
                     /product="GntR family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=53998
     Region          7..66
                     /region_name="HTH_ARSR"
                     /note="Arsenical Resistance Operon Repressor and similar
                     prokaryotic, metal regulated homodimeric repressors. ARSR
                     subfamily of helix-turn-helix bacterial transcription
                     regulatory proteins (winged helix topology). Includes
                     several proteins that appear to...; cl46857"
                     /db_xref="CDD:481197"
     Region          8..>143
                     /region_name="PRK03837"
                     /note="transcriptional regulator NanR; Provisional;
                     cl46953"
                     /db_xref="CDD:481293"
     Site            order(8,31,33..34,42..46,48..49,52,62..63,65..66)
                     /site_type="DNA binding"
                     /note="DNA-binding site [nucleotide binding]"
                     /db_xref="CDD:153418"
     Region          235..307
                     /region_name="WHTH_GntR"
                     /note="Winged helix-turn-helix (WHTH) DNA-binding domain
                     of the GntR family of transcriptional regulators; cd07377"
                     /db_xref="CDD:153418"
     Site            order(235,237,267,269..270,278..282,284..285,288,298..299,
                     301..304)
                     /site_type="DNA binding"
                     /note="DNA-binding site [nucleotide binding]"
                     /db_xref="CDD:153418"
ORIGIN      
        1 mktdsgryql vydyyetril ygfyirgehl psilkicaif qlapatvrsa lrllekrgyi
       61 kvaarkaaev vykarpgqfr knaaeyfvpr kegiidlfqs gkllfeplwk tgirqwnaed
      121 wedvrrtlkg tsadfvalpv kfyilvlgtl knelvlnlyw emiryirfpy lggrreagad
      181 cfaagtdtkn etvseleqkf eadynaavke llifierart eysladaepv pfrwsiyrqr
      241 pqlrytlash iirgvmngqy pvgsylpslq qmansygvgl ntvrrtlgll esmgltksyq
      301 gkgtlvcrep akvdftqtgt wegirlyres lqllaltieq islytlnhak eaeksaladg
      361 leriqrdgks ylcfeaylgf ieehcplsfv recyrrlrel lawgysfvlf rikgkslhke
      421 yaaiiaqaet llrqkrfpef ahiwkklmer eecqfqsamd eilpgrr
//
LOCUS       WP_258106105              42 aa            linear   BCT 02-MAR-2025
DEFINITION  AcaB family transcriptional regulator [Vibrio jasicida].
ACCESSION   WP_258106105
VERSION     WP_258106105.1
KEYWORDS    RefSeq.
SOURCE      Vibrio jasicida
  ORGANISM  Vibrio jasicida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (residues 1 to 42)
  AUTHORS   Hancock,S.J., Phan,M.D., Luo,Z., Lo,A.W., Peters,K.M., Nhu,N.T.K.,
            Forde,B.M., Whitfield,J., Yang,J., Strugnell,R.A., Paterson,D.L.,
            Walsh,T.R., Kobe,B., Beatson,S.A. and Schembri,M.A.
  TITLE     Comprehensive analysis of IncC plasmid conjugation identifies a
            crucial role for the transcriptional regulator AcaB
  JOURNAL   Nat Microbiol 5 (11), 1340-1348 (2020)
   PUBMED   32807890
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020474.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08900.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..42
                     /organism="Vibrio jasicida"
                     /db_xref="taxon:766224"
     Protein         1..42
                     /product="AcaB family transcriptional regulator"
                     /calculated_mol_wt=4356
ORIGIN      
        1 mtrqdmaann akaqaaqakl gaipfevleg veraefapdi rg
//
LOCUS       WP_258106502             306 aa            linear   BCT 02-MAR-2025
DEFINITION  polysaccharide deacetylase family protein [Christensenella minuta].
ACCESSION   WP_258106502
VERSION     WP_258106502.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 306)
  AUTHORS   Freiberg,C., Fellay,R., Bairoch,A., Broughton,W.J., Rosenthal,A.
            and Perret,X.
  TITLE     Molecular basis of symbiosis between Rhizobium and legumes
  JOURNAL   Nature 387 (6631), 394-401 (1997)
   PUBMED   9163424
REFERENCE   2  (residues 1 to 306)
  AUTHORS   Mishra,C., Semino,C.E., McCreath,K.J., de la Vega,H., Jones,B.J.,
            Specht,C.A. and Robbins,P.W.
  TITLE     Cloning and expression of two chitin deacetylase genes of
            Saccharomyces cerevisiae
  JOURNAL   Yeast 13 (4), 327-336 (1997)
   PUBMED   9133736
REFERENCE   3  (residues 1 to 306)
  AUTHORS   Millward-Sadler,S.J., Poole,D.M., Henrissat,B., Hazlewood,G.P.,
            Clarke,J.H. and Gilbert,H.J.
  TITLE     Evidence for a general role for high-affinity non-catalytic
            cellulose binding domains in microbial plant cell wall hydrolases
  JOURNAL   Mol Microbiol 11 (2), 375-382 (1994)
   PUBMED   8170399
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013672.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01522.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..306
                     /product="polysaccharide deacetylase family protein"
                     /GO_function="GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=32956
     Region          91..278
                     /region_name="CE4_SF"
                     /note="Catalytic NodB homology domain of the carbohydrate
                     esterase 4 superfamily; cl15692"
                     /db_xref="CDD:472828"
ORIGIN      
        1 mmrktvcitl svlacmalla gcgagdaaaa aeptvitsgq taaashmpee depaatpept
       61 pgqvtdleql qakegfmlpk sldgidpmnd kvvaltfddg pnpvktpell dilkengava
      121 tffvvgnlae eypdvvkrey eegheiaths ythpeasewk glstaaqleq ytkandaiea
      181 atglrtlfdr ppggnlteeq aeeigreqil wsvdpedwky kdadaiyehv mngwnggvvq
      241 dgvvilshei yqstvdayar iipalkekgy kfvtvsqmmq iaelrgetpa ylfrsapaag
      301 eavgee
//
LOCUS       WP_258106504             596 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Christensenella
            minuta].
ACCESSION   WP_258106504
VERSION     WP_258106504.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 596)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 596)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 596)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 596)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 596)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 596)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 596)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 596)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 596)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..596
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=68904
     Region          31..165
                     /region_name="GAF_2"
                     /note="GAF domain; cl21515"
                     /db_xref="CDD:473894"
     Region          300..455
                     /region_name="GGDEF"
                     /note="Diguanylate-cyclase (DGC) or GGDEF domain; cd01949"
                     /db_xref="CDD:143635"
     Site            order(335,378)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143635"
     Site            order(340,343..344,348,352,374,376..379)
                     /site_type="active"
                     /db_xref="CDD:143635"
     Site            order(370,398)
                     /site_type="active"
                     /note="I-site [active]"
                     /db_xref="CDD:143635"
     Site            order(500,504,510,525..528,555,560)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Region          511..586
                     /region_name="PAS_3"
                     /note="PAS fold; pfam08447"
                     /db_xref="CDD:430001"
     Site            order(522,526,534,537..538,567,569)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
ORIGIN      
        1 msgncgktey lnilnealee lepfvigqgp laeiiesfav firrflpvcg vgliglsedy
       61 rvreaavwrn grilpeeavr hffdldfsew kdfartdeaa ddeklgrimk ldcrteedap
      121 llvvpvsyss riqgvimaek eqewteeekr llemlaqtsr ialanriycq nqmeqtwvfn
      181 elmdnmrani yvtdldtdei lfmnktmrke fgveepigki cwkilqadkt qrcdfcpidq
      241 lrnnpaekps ylweeyntlt hrhyenydst mrwldgrivh fqqsvditsa kkmsreagld
      301 eltgmmgrra gkerlsevla rakkesaavt vclydvnllk tvndtyghve gdnllttiak
      361 vvtgslekgq fafrmsgdef mvvfygcger vadrvmqhal eelarirere kkpyeisfcy
      421 gvlevgpqdm editkittev dermyrqkri yhngrmgrer aekgmpgnfs ydkehlyeal
      481 sastddyiyi cnmktnmfrf ppkmveefal pgevvyggds iwsmlihede rpafaqsmee
      541 irdgatdthd leyrvrdkdg kwvwihcrgr vsrdengeae lfagiitkpk elkttd
//
LOCUS       WP_258106508            1071 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein [Christensenella minuta].
ACCESSION   WP_258106508
VERSION     WP_258106508.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 1071)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..1071
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=117479
     Region          3..406
                     /region_name="PfuEndoQ-like"
                     /note="lesion-specific endonuclease similar to Pyrococcus
                     furiosus EndoQ; cd19067"
                     /db_xref="CDD:410989"
     Site            order(7,160,163,165,193..196,217..219)
                     /site_type="other"
                     /note="putative deaminated base recognition pocket
                     [nucleotide binding]"
                     /db_xref="CDD:410989"
     Site            order(225,266,274,299)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410989"
     Region          463..1050
                     /region_name="UvrD"
                     /note="Superfamily I DNA or RNA helicase [Replication,
                     recombination and repair]; COG0210"
                     /db_xref="CDD:439980"
ORIGIN      
        1 mfiadlhihs kysratsrec vpehldlwar rkgidllgtg dfthpawree lkqklapaee
       61 glyrlkeeyr ladevggnpa sprfilsgei ssiykqdgkv rkihnvillp sleaaealag
      121 klelsfnlhs dgrpilglps rdlleitldi cpeavfipah iwtphfslfg aysgfdavee
      181 cfrdltphih aletglssdp pmnwrlsald gftmvsnsda hspanlarea nlfntemsyp
      241 aiaaalenhd tdefygtlef fpeegkyhnd ghrnckvcmt peetaaaggk cpvcgrritv
      301 gvyhrvvela draegfrpen akhfesivpl pevvassmgl tpaskkvraq yleligtlgp
      361 eltilrktpl aeieraagvc iaegirrlrc geveihpgyd geygkilvmd ksevqalsgq
      421 lslladepkk kpekhasaqa appkadespk eaapvetggn pyglneeqwa aasapertva
      481 vlagpgtgkt rtlvyriawl veqcgvapea itavtftnka asemrerlet qfgdkkavra
      541 mhigtfhslg lsllkewdkn itvidgqeaq avlsetltac ncvmkprdai qavskiknga
      601 agdipqvvyd aycarlrslg vldfddilad tlekfragga kcetlcprfe hllvdefqdi
      661 npvqlelira wgkkskgifv igdpdqsiyg frgsdahcfe rlkedrpvre irlkknyrst
      721 peiigcalpv lrrsepvlea qresgvktrl laadspfsea lfiakeinam vggvdmlaah
      781 aqhkksadta yglsdiavly rthrqaelie eclvkegipy vvlgkdntlt drrvrgalaf
      841 frilcdpkds vslgtclrad svapavaeki ldaygrrkqt aaslvsvled agetklaghf
      901 etcaplmrka apaelldlwi sgqgygeeap aclkrlrnma vfhhrmadfl taltlgtegd
      961 lkrsgqkayt adavtlmtlh aakglefpav flcgvtdgli pfrrkdgecs egeerrlfyv
     1021 gmtraqdelv mltrqeersp fladipsgll aegpahtrkk pagrqlgfft n
//
LOCUS       WP_258106512             109 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Christensenella minuta].
ACCESSION   WP_258106512
VERSION     WP_258106512.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 109)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07883.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..109
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=11564
     Region          25..106
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 mlidfeqlde teiknfyggt qstyarmfad esnrimrgrl apgasigpht hetgseiifi
       61 lsgtgkafcg gatealtpgm chycpkghth slaadgaeal vffavvpqq
//
LOCUS       WP_258106546             147 aa            linear   BCT 02-MAR-2025
DEFINITION  prepilin-type N-terminal cleavage/methylation domain-containing
            protein [Christensenella minuta].
ACCESSION   WP_258106546
VERSION     WP_258106546.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019575.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07963.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..147
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /calculated_mol_wt=16181
ORIGIN      
        1 mrqtkkkgft lieliiviai lailaailip niagylksas tevahsdlkl iertfqnata
       61 laaakeyelq gqiiipanaq hstaaeqylt gkmnetlgee leysifyeas ndpqhpdvpq
      121 yliisywpdg rdgdvyvlnn gtfedpq
//
LOCUS       WP_258106549             221 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Christensenella minuta].
ACCESSION   WP_258106549
VERSION     WP_258106549.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 221)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..221
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=24640
     Region          3..136
                     /region_name="CitB"
                     /note="DNA-binding response regulator DpiB of
                     citrate/malate metabolism [Transcription, Signal
                     transduction mechanisms]; COG4565"
                     /db_xref="CDD:443622"
     Region          <158..>218
                     /region_name="COG3355"
                     /note="Predicted transcriptional regulator
                     [Transcription]"
                     /db_xref="CDD:442583"
ORIGIN      
        1 metkqfrvvi vdddpmvsyi sreylerdcr favagefadg realhflcgn tvdlvllelr
       61 mpeysgeelm kdllkndvpa dvipvtaers geslghalrl gaadylikpf tyerfrqcle
      121 ryaqraqiaa glkaadqeav dhllhmpqaa vdagggreqh imgcfrnape rsftvkevar
      181 eaglsdvtvr rylkrladag rivsgidynt gghprilykl p
//
LOCUS       WP_258106563             759 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Christensenella minuta].
ACCESSION   WP_258106563
VERSION     WP_258106563.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 759)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 759)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 759)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 759)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..759
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=86181
     Region          21..341
                     /region_name="PurR"
                     /note="DNA-binding transcriptional regulator, LacI/PurR
                     family [Transcription]; COG1609"
                     /db_xref="CDD:441217"
     Region          405..753
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mpetfqgnqd kerklerhki atmrdvarla gvsqgtvsnv lngvkgvssd kikrveaavr
       61 elgyeqnala knlktskngn tiyvvfpnln epefeeifda vtrmaeergf slnvfvcsel
      121 pyrekqilnq armfnadgil litcqpener lfqklekggh rvvgmlrkie ncgfvgidvr
      181 ealikninrq igcgikriam ltgpreysfd tacvdaylna lfsadieirn dylltteydk
      241 esamqqavrl lnleekpeai yvtsevlaeg vrkavaltsi dgkdipklii mksrrwtdtp
      301 aaneesmilp ygkmgkmafe mlaglignpk ggaeerlikp eekqeellkl qagkprqgrv
      361 rvllpnnhag ravkylcndf trstgigvqa dlinyrgmld eiwrssdgky dvfaldvpwv
      421 kelvvegcle lledyigdas qlrerfpgqi fdayslmngr vwtlpfsftt qllfyrkdlf
      481 eklknqrlyf ewykeelrvp ttweeynkva rlftrkfnpd sdtlygtsls grvptgatse
      541 ylpriwaqgi dlfngetain drekavyale nyiecydyah pdapdwwwdd eamdfcqgns
      601 ammvqysdqv tilrdrnisr vvgkvgydvv pgnaslfggw sigmnshske kaaayefikw
      661 aasermsvvn avlgriipyt sicdstelln lypwhketfe vfqdakkrfa pntadgrcis
      721 envfekiigs tvneaitkkc takeavdrmd teigkiylr
//
LOCUS       WP_258106592             299 aa            linear   BCT 02-MAR-2025
DEFINITION  glycine betaine ABC transporter substrate-binding protein
            [Christensenella minuta].
ACCESSION   WP_258106592
VERSION     WP_258106592.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 299)
  AUTHORS   Fraser,K.R., Harvie,D., Coote,P.J. and O'Byrne,C.P.
  TITLE     Identification and characterization of an ATP binding cassette
            L-carnitine transporter in Listeria monocytogenes
  JOURNAL   Appl Environ Microbiol 66 (11), 4696-4704 (2000)
   PUBMED   11055912
REFERENCE   2  (residues 1 to 299)
  AUTHORS   Kappes,R.M., Kempf,B., Kneip,S., Boch,J., Gade,J., Meier-Wagner,J.
            and Bremer,E.
  TITLE     Two evolutionarily closely related ABC transporters mediate the
            uptake of choline for synthesis of the osmoprotectant glycine
            betaine in Bacillus subtilis
  JOURNAL   Mol Microbiol 32 (1), 203-216 (1999)
   PUBMED   10216873
REFERENCE   3  (residues 1 to 299)
  AUTHORS   Kempf,B. and Bremer,E.
  TITLE     OpuA, an osmotically regulated binding protein-dependent transport
            system for the osmoprotectant glycine betaine in Bacillus subtilis
  JOURNAL   J Biol Chem 270 (28), 16701-16713 (1995)
   PUBMED   7622480
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015995.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04069.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..299
                     /product="glycine betaine ABC transporter
                     substrate-binding protein"
                     /GO_component="GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=33462
     Region          31..298
                     /region_name="PBP2_ProWX"
                     /note="Substrate-binding protein ProWX of ABC-type
                     osmoregulated transporter and its related proteins; the
                     type 2 periplasmic-binding protein fold; cd13612"
                     /db_xref="CDD:270330"
     Site            order(37,39,88..89,92,133,135,214,238)
                     /site_type="other"
                     /note="putative chemical substrate binding site [chemical
                     binding]"
                     /db_xref="CDD:270330"
ORIGIN      
        1 mkkkkwtall maavlcgtfl lggcsgkasd tvriatkpma eqfilsemla aliekdtdln
       61 veitkgiagg tgnihpamvk gdfdlypeyt gtawsdilkh teqaspdemy kklqeeykdq
      121 fkmewvglyg fnntytlavk kefaeennvv tfsdlaaltp nlkfgaeydf yeredgydpl
      181 cetygyhfkd tsdldiglky qaigadevdv inafttdgll gayelktled dkdffpsyyc
      241 gtivrgevle ahpelrgvlm kmdgiltdee msqlnyrven dnedektvav dfltqkgll
//
LOCUS       WP_258106647             587 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6020 family protein [Christensenella minuta].
ACCESSION   WP_258106647
VERSION     WP_258106647.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039324.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19484.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..587
                     /product="DUF6020 family protein"
                     /calculated_mol_wt=65538
     Region          60..575
                     /region_name="DUF6020"
                     /note="Family of unknown function (DUF6020); pfam19484"
                     /db_xref="CDD:466106"
ORIGIN      
        1 mrfivnalls lcctvalsrg ylnggqplvp adnvfsvlff vlfyvlfyfa fhslyrrdtv
       61 isliagfvla actsaganfi qfgslaltdr yfllnlaalt iiytalflll fkhapklnga
      121 ikkvsppvgi ynrlfgtkwr afltffavla icwlpaflat ypghfsydgp iqaaqiftdg
      181 rlnahhpvah tlfmtslfel gklisgdyql gltlycviqa livaaclsym gafllckkvp
      241 vlvvllailf lalnpfvqyf afttakdvlf gaffllailm itdmlldpet ffekkarifa
      301 fiivtllvcl lrkqglyvll lfvpvmlvin rrhlvkqaia ivvgivlslv vtgpvstaag
      361 vipsppqevl svpiqqlara inyappekit eeeraailey ipqealdsyi aeisdpvkdk
      421 fnqdayardp egffsiwaev gqktpgmyvd sflygsmgyl ypspalmhqw avmmdfytid
      481 dlpiernsmf payteylddv gqsffsgvpi lstlvspavp fwimvlvaaf lfkrrqykal
      541 vpllaafifl cslflapvmc iryiipllyl iplivslpyi fpiqrre
//
LOCUS       WP_258106718             345 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Christensenella
            minuta].
ACCESSION   WP_258106718
VERSION     WP_258106718.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13407.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..345
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=36659
     Region          61..333
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mkklvvlsla llivfatllt gcsgtaqpsa esegpsasae etaaekeaes saaaetgekr
       61 tigtvvldgt nphctlfeeg frsivedkyg deaivldavg dpetlincis dlmsqqvdgi
      121 vleacddeap iailkevkam gipvaaadmy lqttedeglv lsqtisqnye agvavaedli
      181 eraggeemnv cimemkqnss gmmridgfvd tiaghdniki leqsqpseds veaklelaei
      241 wvqkyddida ifayhdvaal aavqalkaan mldgvlvygv dgspdamtsi kngemtgtsk
      301 qqpdqmaiss aedvytvlng gtidhewevy iptifvdasn vdeyl
//
LOCUS       WP_258106699             110 aa            linear   BCT 02-MAR-2025
DEFINITION  plasmid mobilization protein [Christensenella minuta].
ACCESSION   WP_258106699
VERSION     WP_258106699.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 110)
  AUTHORS   Rehman,S., Li,Y.G., Schmitt,A., Lassinantti,L., Christie,P.J. and
            Berntsson,R.P.
  TITLE     Enterococcal PcfF Is a Ribbon-Helix-Helix Protein That Recruits the
            Relaxase PcfG Through Binding and Bending of the oriT Sequence
  JOURNAL   Front Microbiol 10, 958 (2019)
   PUBMED   31134011
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046164.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21983.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..110
                     /product="plasmid mobilization protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=12556
     Region          4..>68
                     /region_name="PRK13877"
                     /note="conjugal transfer transcriptional regulator TraJ"
                     /db_xref="CDD:184361"
     Region          61..99
                     /region_name="MobC"
                     /note="Bacterial mobilization protein (MobC); pfam05713"
                     /db_xref="CDD:428600"
ORIGIN      
        1 madrkrkipl ivyvtenere tiqkkmelag sannysayar kmlidgyviq idhapikela
       61 reiggigrni nqitaranam gnlyahdiqd ikelmkevwh tvrytllsqr
//
LOCUS       WP_258106727             553 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Christensenella minuta].
ACCESSION   WP_258106727
VERSION     WP_258106727.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 553)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..553
                     /product="AMP-binding protein"
                     /calculated_mol_wt=61342
     Region          69..540
                     /region_name="FAA1"
                     /note="Long-chain acyl-CoA synthetase (AMP-forming) [Lipid
                     transport and metabolism]; COG1022"
                     /db_xref="CDD:440645"
ORIGIN      
        1 menypnyplr neknmrtmla aakeaygard mlrvrtkekt vrgigagefl sdmdalgnal
       61 lglgladahi avigptsyew lltyyavqcg vgvivpidke lpdgeianil adsgaralvf
      121 sgeyadtven irgglaavky yidmraekng gntlsfrgli reakdcgyeq reidenamsa
      181 llytsgttgk skgvmltqkn ilsaseggls lldlgqvcms vlpvhhsfes thgitmmiqn
      241 gtticindsl rhfmenlqlf kpdmiflvpl fvemmhrkiw qnaeangqae alralveksn
      301 aelragednr gryfknirda fggnlkliic ggaplsarlm refrelgill lngygiteca
      361 plvsvnknry ycdgavgipi accdvkvena dedgdgeiwv kgpnvmlgyy kneegtrevm
      421 kdgwfntgdi gridgggflh itgrkknliv lssgknvype eieeylmrip yikevivyap
      481 ladgmretel caeifvteey tavhsareie enlrkdisav nktlptfkhi grfhvrdref
      541 ekttkksikr fam
//
LOCUS       WP_258106776             384 aa            linear   BCT 02-MAR-2025
DEFINITION  ImmA/IrrE family metallo-endopeptidase [Christensenella minuta].
ACCESSION   WP_258106776
VERSION     WP_258106776.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 384)
  AUTHORS   Masiewicz,P., Brzostek,A., Wolanski,M., Dziadek,J. and
            Zakrzewska-Czerwinska,J.
  TITLE     A novel role of the PrpR as a transcription factor involved in the
            regulation of methylcitrate pathway in Mycobacterium tuberculosis
  JOURNAL   PLoS One 7 (8), e43651 (2012)
   PUBMED   22916289
  REMARK    Erratum:[PLoS One. 2014;9(11):e113015]
REFERENCE   2  (residues 1 to 384)
  AUTHORS   Vujicic-Zagar,A., Dulermo,R., Le Gorrec,M., Vannier,F., Servant,P.,
            Sommer,S., de Groot,A. and Serre,L.
  TITLE     Crystal structure of the IrrE protein, a central regulator of DNA
            damage repair in deinococcaceae
  JOURNAL   J Mol Biol 386 (3), 704-716 (2009)
   PUBMED   19150362
REFERENCE   3  (residues 1 to 384)
  AUTHORS   Bose,B., Auchtung,J.M., Lee,C.A. and Grossman,A.D.
  TITLE     A conserved anti-repressor controls horizontal gene transfer by
            proteolysis
  JOURNAL   Mol Microbiol 70 (3), 570-582 (2008)
   PUBMED   18761623
REFERENCE   4  (residues 1 to 384)
  AUTHORS   Gerstmeir,R., Cramer,A., Dangel,P., Schaffer,S. and Eikmanns,B.J.
  TITLE     RamB, a novel transcriptional regulator of genes involved in
            acetate metabolism of Corynebacterium glutamicum
  JOURNAL   J Bacteriol 186 (9), 2798-2809 (2004)
   PUBMED   15090522
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017885.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06114.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..384
                     /product="ImmA/IrrE family metallo-endopeptidase"
                     /calculated_mol_wt=43883
     Region          85..179
                     /region_name="ImmA"
                     /note="Zn-dependent peptidase ImmA, M78 family
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG2856"
                     /db_xref="CDD:442104"
     Region          208..>257
                     /region_name="DUF2072"
                     /note="Zn-ribbon containing protein; pfam09845"
                     /db_xref="CDD:430873"
     Region          259..321
                     /region_name="DZR"
                     /note="Double zinc ribbon; pfam12773"
                     /db_xref="CDD:432773"
ORIGIN      
        1 msasisrypk afdisqiilf ssgadkfpld vkklvensyk dgnilfssls dfavwnkivn
       61 pqdyviprip darcyyypki dtyiivynes qppwrirfsl ahelghimlk hlrdeqteid
      121 rggindpayf wkegeantfa gnllappili qerldgrqfn isdissffrl sptavkdyrk
      181 tdyeqwctws pskyeleile rcrdimhpqk circnhlfyl kgakycpvcg ckflshyyse
      241 dhmkydniel neqgqvtkcl kcgneefvdh adfchicgsp iqnkcgliky dgygnfcgve
      301 scdasrsgti pgnarfcpyc gdetafsrtg llqdwtiera gileneefea raahqnnsis
      361 slppeaeegp dlsdfeplde slpf
//
LOCUS       WP_258106825             168 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Christensenella minuta].
ACCESSION   WP_258106825
VERSION     WP_258106825.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 168)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 168)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13669.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..168
                     /product="VOC family protein"
                     /calculated_mol_wt=19375
     Region          9..146
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mkkewdimqv civvkdlrky vgnyweklgi gpwklrhftn eivreykvdg kpvedefdfh
       61 iatcqigrme feiiqpvkgp ncyfrfleek geglhhvkvp iekeevgemv ryfeaggnpi
      121 lqtgwvdgdf haypdtqddl ammielgvpg pidvpyelyp peavskev
//
LOCUS       WP_258106837             834 aa            linear   BCT 02-MAR-2025
DEFINITION  SpaA isopeptide-forming pilin-related protein [Christensenella
            minuta].
ACCESSION   WP_258106837
VERSION     WP_258106837.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 834)
  AUTHORS   Kang,H.J., Paterson,N.G., Gaspar,A.H., Ton-That,H. and Baker,E.N.
  TITLE     The Corynebacterium diphtheriae shaft pilin SpaA is built of tandem
            Ig-like modules with stabilizing isopeptide and disulfide bonds
  JOURNAL   Proc Natl Acad Sci U S A 106 (40), 16967-16971 (2009)
   PUBMED   19805181
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2009 Oct 27;106(43):18427]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037639.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17802.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..834
                     /product="SpaA isopeptide-forming pilin-related protein"
                     /calculated_mol_wt=91833
     Region          89..197
                     /region_name="TED"
                     /note="Thioester domain; pfam08341"
                     /db_xref="CDD:462437"
     Region          234..820
                     /region_name="ClfA"
                     /note="Clumping factor A-related surface protein, MSCRAMM
                     (microbial surface components recognizing adhesive matrix
                     molecules) family, DEv-IgG fold [Cell
                     wall/membrane/envelope biogenesis]; COG4932"
                     /db_xref="CDD:443959"
ORIGIN      
        1 mikskfkrvt slflatlmcv ttfagigstt ayaasgekad vymvdfprdg danydgvwgh
       61 snltlkngwh tgrsnftnlk aigsysgnva yciepgislk vgqtmnkyde nyfnnlaang
      121 visgdeirlf vgrilqygyr gtistswrsq neaaansiaq ayatqlliwe tvigerdanf
      181 nhvaasgcsn vkdvinakhp lrnkifsyyn smvqsvqnha iipsfcnkss gsaktielew
      241 ngskytttlt dsnnvlskyn fkasisgvsf svngnkltvs mdtapskeft itatkknavr
      301 rgvvvwsegk hgqnssvqdv vsyaqevsds ingyvkmkvs ygscqivkts edgkvdginf
      361 titgnginqt vttanggkfq idnlmpgiyt vteqaydkye pqethrvtvv agqvakvnfn
      421 nklkrgdlqv vkssednlve gvkfhlygts lsgdavdqya vtdkngvatf kdmlisgsep
      481 ytleevdtai ryvvpknqta pvkwkevttr nfnnilkkft vtvtksdaek geaqgnakls
      541 gaiygiykge tlvdkyvtde ngqfttkeyv cdtdwtirei tpsegylldk tihkvgadpk
      601 lyevehnlts ndvteqvikg nvaiikhtdd getkietpek gasfeiylks agsydaankd
      661 erdtivcden gfgqtkdmpy giytvhqtsg wegremmddf dvfisqnaqt yrylinnrnf
      721 esfvnvvkvd aesgksipya gagfkiydpq gnqvkmtfty ptpttidvfy tdangslvtp
      781 ekldygkgys ivevqapygy vlddtpvyfd iteensteev acppilepvp klve
//
LOCUS       WP_258106912             301 aa            linear   BCT 02-MAR-2025
DEFINITION  ROK family protein, partial [Christensenella minuta].
ACCESSION   WP_258106912
VERSION     WP_258106912.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         <1..301
                     /product="ROK family protein"
     Region          6..296
                     /region_name="ASKHA_NBD_ROK_AlsK"
                     /note="nucleotide-binding domain (NBD) of D-allose kinase
                     (AlsK) and similar proteins; cd24070"
                     /db_xref="CDD:466920"
ORIGIN      
        1 rmrsaigidi ggtnfrigwv redgavlcsd kkpskalgeg gkaadllage irafmdanev
       61 rdaraigigf papvcadgkr vfpcpnlknt degfdgidvv srleglglpv aiakdtdmll
      121 qaeimerhtg pqdivtafyf gtgvgnsvyy rgsllrgahg sgcdaghipv lggmrtcgcg
      181 kkgciecyas gaylvslwke rfadcaladl frvhkgarel aafveacaip vaaevaifdp
      241 tlvilgggil emdhfpykel tgkiyehvkk pypaenmvie raaaadagir gaawyalsha
      301 l
//
LOCUS       WP_258106898             803 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 C-terminal domain-containing protein
            [Christensenella minuta].
ACCESSION   WP_258106898
VERSION     WP_258106898.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 803)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014026.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01915.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..803
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=88163
     Region          17..717
                     /region_name="alph_arabinopyran"
                     /note="exo-alpha-(1->6)-L-arabinopyranosidase; NF041610"
                     /db_xref="CDD:469494"
ORIGIN      
        1 merlkdrssv kkiigqmtle ekagaltggs lffgtgleky gipslyfldg gtganyfqmy
       61 ldcfcknhkm steggsalfd mnseaqavpe llaldadeqa aaqadektrk evammkekmk
      121 ayipggvmpg cfppgillga twdgenirrv gralgkeany ygvdvllgtp nvnihrdplg
      181 grlfegysed pclvaqlape lvkgvqeegv lanpkhfaan nqetdrrgvd etvqkralye
      241 iyfpgfraci qegksktvms aynaingecc amnrwlltdv lrgewgfegf vvsdwggayd
      301 qaealragnd ydmpgprsia piveavksgr lpekvldtal ervlnmmlea pamtgkktek
      361 idiedsrqaa ydaakegivl lkneggtlpf stdanisffg gkskkfiesg ggsanvitdr
      421 tsnvydcsrk iagdgrvrfg eitddtdavv vtvgvigqeg fdraslsida edekmlketl
      481 eeakrsgkkt vvilnvcgpv dvrefiddtd allcvfipgm eggraaadil ygrvnpsgkl
      541 pltfpkryed cptygnfpgr gakvmygegi fvgyryydmk niepmfpfgf glsytqfgig
      601 hlhldrdcmn vdregddlsa tvkvkntgrc ggkevvqlyi aqekptlvkp pkelkafrkv
      661 wlepgeekei tftvtadmlq syddgtekwq iepgyykvlv gnssrnicae asfevkgynp
      721 ygvnedtplg klvmipgald elmkhcpegr ltresvelsi lfaatgklse ywdkviapam
      781 egigddekqr ryeamlaamn rfh
//
LOCUS       WP_258106926             203 aa            linear   BCT 02-MAR-2025
DEFINITION  4Fe-4S binding protein [Christensenella minuta].
ACCESSION   WP_258106926
VERSION     WP_258106926.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024211.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12801.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..203
                     /product="4Fe-4S binding protein"
                     /calculated_mol_wt=23057
     Region          <24..>177
                     /region_name="NapH"
                     /note="Polyferredoxin NapH [Energy production and
                     conversion]; COG0348"
                     /db_xref="CDD:440117"
ORIGIN      
        1 mkkhwydylw ifsaaylalg ffnilfawig licfivplli siiggskayc nkycgrgqlf
       61 ellggrlgls rkkappkflr skwfryaflt ffmamfilmv yntylvfaga tlreavtllw
      121 mfklpwqwvn tsfvapgiaq fafgfygvml tssvlgmitm ilfkprswcv ycpmgtmtqa
      181 ickikyigvg qdgkknetdc gva
//
LOCUS       WP_258106931             238 aa            linear   BCT 02-MAR-2025
DEFINITION  permease [Christensenella minuta].
ACCESSION   WP_258106931
VERSION     WP_258106931.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015715.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03773.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..238
                     /product="permease"
                     /calculated_mol_wt=26371
     Region          44..>169
                     /region_name="ArsP_1"
                     /note="Predicted permease; pfam03773"
                     /db_xref="CDD:281730"
     Region          180..233
                     /region_name="Fer"
                     /note="Ferredoxin [Energy production and conversion];
                     COG1141"
                     /db_xref="CDD:440756"
ORIGIN      
        1 msilkklkgn iflvvviaay ivmfivrpdm gvesiknsgy yikemllimp vifiltalld
       61 lwlpkekvir ylgkdskakg iafsfilgsi sagpvyaafp mcvmlhkkga sirniviils
      121 swavikipml vneakflglk fmairwiltv iaiiifswit akivkdkdlp tqipahigps
      181 lnrdacmgcg lcvkhypemf vmdgkkadin keidpdpekl kqtidvcpvk aisnqgys
//
LOCUS       WP_258106965             383 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Christensenella
            minuta].
ACCESSION   WP_258106965
VERSION     WP_258106965.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13407.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..383
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=40524
     Region          61..374
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mkkmlalfla llmtccvfag caagggsaep saeapaegte sspaaaatea ageqgtkdtf
       61 kvgfsaitln gdffttmase lqqacydegl vaspedvlvl nansntadei anmdtfiaqg
      121 ydmifvdstn pddivplinq anaagaqvic idsyvnggdk vtvvysdnkq ngrkvglafa
      181 eemgdqeiys imlsgvkgni ageerrvgim cgvlearlgi tedeawelay qmndeligng
      241 ytentdakfv iagqgwgnwn iqdimadand livktygkln tifaendqml fggmqaaeda
      301 glkegiyyaa aadgekktcd yikegkvvav genspvqiak laaqtarevl vdgkdptsyp
      361 dtvttdavav tkenvdeeye ncf
//
LOCUS       WP_258107075             259 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase family protein [Christensenella minuta].
ACCESSION   WP_258107075
VERSION     WP_258107075.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04851.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..259
                     /product="DEAD/DEAH box helicase family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=30361
     Region          10..>214
                     /region_name="SSL2"
                     /note="Superfamily II DNA or RNA helicase [Transcription,
                     Replication, recombination, and repair]; COG1061"
                     /db_xref="CDD:440681"
ORIGIN      
        1 myvselittd aidtwrgnsr illksscgtg ktkfvtekfy gyakqrhkki liltnrrflk
       61 qqtekdcegk edvitiktyq sleqnldyan rmlhkydyiv adeahyffsd svlfnstsyr
      121 lmsllkqldr pvifmtatpe vlerwitfne enkfdiqkpp qvdkfyyfrn paaigrllgl
      181 ipldektvcf csdlrymeel ynqykddsmf vcsesqahyy rkyvdknvvq nwaapnlctk
      241 yrvsgggivk vsytaytml
//
LOCUS       WP_258107114             959 aa            linear   BCT 02-MAR-2025
DEFINITION  EAL domain-containing protein [Christensenella minuta].
ACCESSION   WP_258107114
VERSION     WP_258107114.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 959)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00563.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..959
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..959
                     /product="EAL domain-containing protein"
                     /calculated_mol_wt=108605
     Region          32..252
                     /region_name="HisJ"
                     /note="ABC-type amino acid transport/signal transduction
                     system, periplasmic component/domain [Amino acid transport
                     and metabolism, Signal transduction mechanisms]; COG0834"
                     /db_xref="CDD:440596"
     Region          281..478
                     /region_name="PBP2_BvgS_HisK_like"
                     /note="The type 2 periplasmic ligand-binding protein
                     domain of the sensor-kinase BvgS and histidine kinase
                     receptors, and related proteins; cd01007"
                     /db_xref="CDD:270228"
     Region          407..959
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
ORIGIN      
        1 mtrcrqifcc miavllvfaf splpahaqke kirvgyyedg dymslnenge yagfnieyle
       61 kiarytdwey eivdcrswdn tlqmlkdgki dllpavyyte erarelllsn lkmcdiystl
      121 nvradddryh yedfesfggm kvgviknsvd aanfgkyceg ngieleiipy eetgellgal
      181 adgtldgvai thlgknstfr svaqfspepl yialapgrer llrelnqaqs qlklrdpyye
      241 aelydkyfsv sihqqpafta eeqefidhad kikavygtad mpiefndpet gefagiarel
      301 fqsienqtgl efefipaatr aeafgkikng eadvicsvvd dylwarehgl dmtgsylrsp
      361 lvavttkhrn geiialpegy wfsreiakdn pgrtikyyvt fencfdalls gqadvtftdt
      421 yvadyllsdi ryeqfsvvtl sgyveeisig vsksadprlf aildrcvqyt steaideivl
      481 qnsvvrqeit ldylihrypa atigivvlvf aavtgvlgyi lrtksknnkt irdllyrdrl
      541 tgagnlnqfr mdaekvmeek trgeyavvsa dieqfkaind afgftegdev lrslaavler
      601 svteeecyar vsadrfvlll ryggweelaa rtasigreme ewaentkrpy sismifgvyi
      661 vqdaekfets lamdfanyar whakttraaq tvlydetmrr eelrqrhlsd imkgalknge
      721 fvpyyqpkvn mctgdtvgae alvrwirpdg emqmpgsflp ffeqngfive idlhifeetc
      781 rlmkewadsg iavktvscnf srrhfknpsf arqlagiadr fgvphgllev eitesivmed
      841 iysvrkcfgq lkelgfklai ddfgagyssl glleqldvdv ikldrsfirs eskkikeeiv
      901 vrgvvaiase lgmeivcegv etkeqadmlv rvgcliaqgf yyarpmpage frkrlhgaq
//
LOCUS       WP_258106313             214 aa            linear   BCT 02-MAR-2025
DEFINITION  CDGSH iron-sulfur domain-containing protein [Christensenella
            minuta].
ACCESSION   WP_258106313
VERSION     WP_258106313.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 214)
  AUTHORS   Paddock,M.L., Wiley,S.E., Axelrod,H.L., Cohen,A.E., Roy,M.,
            Abresch,E.C., Capraro,D., Murphy,A.N., Nechushtai,R., Dixon,J.E.
            and Jennings,P.A.
  TITLE     MitoNEET is a uniquely folded 2Fe 2S outer mitochondrial membrane
            protein stabilized by pioglitazone
  JOURNAL   Proc Natl Acad Sci U S A 104 (36), 14342-14347 (2007)
   PUBMED   17766440
REFERENCE   2  (residues 1 to 214)
  AUTHORS   Wiley,S.E., Paddock,M.L., Abresch,E.C., Gross,L., van der Geer,P.,
            Nechushtai,R., Murphy,A.N., Jennings,P.A. and Dixon,J.E.
  TITLE     The outer mitochondrial membrane protein mitoNEET contains a novel
            redox-active 2Fe-2S cluster
  JOURNAL   J Biol Chem 282 (33), 23745-23749 (2007)
   PUBMED   17584744
REFERENCE   3  (residues 1 to 214)
  AUTHORS   Wiley,S.E., Murphy,A.N., Ross,S.A., van der Geer,P. and Dixon,J.E.
  TITLE     MitoNEET is an iron-containing outer mitochondrial membrane protein
            that regulates oxidative capacity
  JOURNAL   Proc Natl Acad Sci U S A 104 (13), 5318-5323 (2007)
   PUBMED   17376863
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020917.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09360.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..214
                     /product="CDGSH iron-sulfur domain-containing protein"
                     /GO_component="GO:0043231 - intracellular membrane-bounded
                     organelle [Evidence IEA]"
                     /GO_function="GO:0051537 - 2 iron, 2 sulfur cluster
                     binding [Evidence IEA]"
                     /calculated_mol_wt=23326
     Region          1..75
                     /region_name="COG3369"
                     /note="Uncharacterized conserved protein, contains
                     Zn-finger domain of CDGSH type [Function unknown]"
                     /db_xref="CDD:442596"
     Region          87..143
                     /region_name="Fer4_8"
                     /note="4Fe-4S dicluster domain; cl19102"
                     /db_xref="CDD:473136"
     Region          165..>209
                     /region_name="COG3369"
                     /note="Uncharacterized conserved protein, contains
                     Zn-finger domain of CDGSH type [Function unknown]"
                     /db_xref="CDD:442596"
ORIGIN      
        1 mrikvlkdgp yevtgnvplr emkiganeag estrwvdgkt fkteetyhlc rcgksknkpf
       61 cdgshthgfd gtetadnmsy ddtavvycgd gmelmddegl cavarfcdaa gstwrlinga
      121 enealairqa cdcpsgrltv vkdgkkiepk lpreiavved epegkhgplw vrggieieae
      181 dgtvyevrnr vtlcrcggsg nkpfcdamhm edge
//
LOCUS       WP_258107137             229 aa            linear   BCT 02-MAR-2025
DEFINITION  biotin/lipoyl-containing protein, partial [Christensenella minuta].
ACCESSION   WP_258107137
VERSION     WP_258107137.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012584.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00364.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..>229
                     /product="biotin/lipoyl-containing protein"
     Region          1..>227
                     /region_name="PRK11856"
                     /note="branched-chain alpha-keto acid dehydrogenase
                     subunit E2; Reviewed"
                     /db_xref="CDD:237001"
ORIGIN      
        1 matavimprq gqsvesciit kwnkqvgdsv aegdvlfsye tdkasfeeea kvagtllail
       61 aeegddvpcl envcvigepg edvsefsaaa tvdggetapa aqeapaqaea apvaaaatgs
      121 vqaggrikis prakgiaenq nldikkavpt gpngriierd ilelsklgae amasaatavc
      181 asagaavpea eyedvalpni rkviarsmha slsemaqlth sfsfdatqv
//
LOCUS       WP_258107142             109 aa            linear   BCT 02-MAR-2025
DEFINITION  BMC domain-containing protein [Christensenella minuta].
ACCESSION   WP_258107142
VERSION     WP_258107142.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 109)
  AUTHORS   Kerfeld,C.A., Sawaya,M.R., Tanaka,S., Nguyen,C.V., Phillips,M.,
            Beeby,M. and Yeates,T.O.
  TITLE     Protein structures forming the shell of primitive bacterial
            organelles
  JOURNAL   Science 309 (5736), 936-938 (2005)
   PUBMED   16081736
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013129.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00936.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..109
                     /product="BMC domain-containing protein"
                     /GO_component="GO:0031469 - bacterial microcompartment
                     [Evidence IEA]"
                     /calculated_mol_wt=11226
     Region          <1..16
                     /region_name="NeuC_NnaA"
                     /note="UDP-N-acetyl-D-glucosamine 2-epimerase,
                     UDP-hydrolysing; TIGR03568"
                     /db_xref="CDD:274654"
     Region          21..98
                     /region_name="BMC_PduT_repeat2"
                     /note="1,2-propanediol utilization protein T (PduT),
                     Bacterial Micro-Compartment (BMC) domain repeat 2;
                     cd07054"
                     /db_xref="CDD:132894"
     Site            order(26,29,38,41..42,48,53,60)
                     /site_type="other"
                     /note="putative hexamer interface [polypeptide binding]"
                     /db_xref="CDD:132894"
     Site            53
                     /site_type="active"
                     /note="putative hexagonal pore [active]"
                     /db_xref="CDD:132894"
ORIGIN      
        1 mignlssgil espsigestd algiietrda asavyaadea vktsgvwvre lrlangiggk
       61 gvvilcggia eiiaatekas llcrkrnrlv astvvtnphe qtcktlfet
//
LOCUS       WP_258107174             354 aa            linear   BCT 02-MAR-2025
DEFINITION  type I restriction endonuclease [Christensenella minuta].
ACCESSION   WP_258107174
VERSION     WP_258107174.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 354)
  AUTHORS   Piekarowicz,A., Klyz,A., Kwiatek,A. and Stein,D.C.
  TITLE     Analysis of type I restriction modification systems in the
            Neisseriaceae: genetic organization and properties of the gene
            products
  JOURNAL   Mol Microbiol 41 (5), 1199-1210 (2001)
   PUBMED   11555298
REFERENCE   2  (residues 1 to 354)
  AUTHORS   Makovets,S., Doronina,V.A. and Murray,N.E.
  TITLE     Regulation of endonuclease activity by proteolysis prevents
            breakage of unmodified bacterial chromosomes by type I restriction
            enzymes
  JOURNAL   Proc Natl Acad Sci U S A 96 (17), 9757-9762 (1999)
   PUBMED   10449767
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016220.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04313.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..354
                     /product="type I restriction endonuclease"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=40472
     Region          1..353
                     /region_name="COG4748"
                     /note="Uncharacterized conserved protein, contains
                     restriction enzyme R protein N terminal (HSDR_N) domain
                     [Function unknown]"
                     /db_xref="CDD:443782"
ORIGIN      
        1 mdftdqikqf skriasmkds ilteeatkts ivmpffnmlg ydvfnpqefv peftcdvgik
       61 kgekidyaim idgdpailve vkwigepldk hdsqlfryfg ttcakfsilt ngaiyrfytd
      121 leetnkmdmt pfleidllnl ddnkilelkk fckenfdess ifdtaselky mslikgvlre
      181 qfanpsddfv rfilsngvye gvktqsivdk yqpivkrams qfindlvsek iqnalktnde
      241 tekieeapia endtptakse ivtteeeiqa fyiirsllce avpveriqfk dtvnylgill
      301 dgkvtkwicr lslkdrskcv fiqengetik hqigsindly qfkdvlavri aelg
//
LOCUS       WP_258107188             262 aa            linear   BCT 02-MAR-2025
DEFINITION  replication protein [Christensenella minuta].
ACCESSION   WP_258107188
VERSION     WP_258107188.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 262)
  AUTHORS   Zylicz,M., Gorska,I., Taylor,K. and Georgopoulos,C.
  TITLE     Bacteriophage lambda replication proteins: formation of a mixed
            oligomer and binding to the origin of lambda DNA
  JOURNAL   Mol Gen Genet 196 (3), 401-406 (1984)
   PUBMED   6239082
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016381.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04492.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..262
                     /product="replication protein"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /calculated_mol_wt=29677
     Region          5..103
                     /region_name="Phage_rep_O"
                     /note="Bacteriophage replication protein O; pfam04492"
                     /db_xref="CDD:461329"
     Region          151..235
                     /region_name="DnaD"
                     /note="DNA replication protein DnaD [Replication,
                     recombination and repair]; COG3935"
                     /db_xref="CDD:443136"
ORIGIN      
        1 maapqkengy tpianeilea vyaaklsatq ykilmilwry tygynrknap isqsfiakat
       61 dthissvrre maklvkwgiv reispagfnr akvlefnkny dewkptqvap tlggsadans
      121 tqneadtgsa hatqkrnikq dtqqqaraya rfytanfgvl tpfisqeaes flddgmtdel
      181 ivmalekavg nnkrywsyak gilnrwleag idtpekarae rvefknrtrg kpkdtmersy
      241 taeekkkreq dayadmealy de
//
LOCUS       WP_258107209             175 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaT-like ssDNA-binding protein [Christensenella minuta].
ACCESSION   WP_258107209
VERSION     WP_258107209.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042800.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20557.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..175
                     /product="DnaT-like ssDNA-binding protein"
                     /calculated_mol_wt=19278
     Region          6..171
                     /region_name="DnaT_2"
                     /note="Putative DnaT-like ssDNA binding protein;
                     pfam20557"
                     /db_xref="CDD:466706"
ORIGIN      
        1 mgltmgvdty vtieesdvyi aehylstdeq rkaweaagdd keialrraca aldsltfrgv
       61 kfafpqplaf pryfgenyam idgvlyapev drypelrevp qaikaaqiee alemvsttva
      121 tenkdirnnp vqsysighls etfetasvgs lqsvlasvra qalirpytgg gyevr
//
LOCUS       WP_258107451             714 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing protein [Campylobacter lari].
ACCESSION   WP_258107451
VERSION     WP_258107451.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter lari
  ORGANISM  Campylobacter lari
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 714)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01966.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Campylobacter lari"
                     /db_xref="taxon:201"
     Protein         1..714
                     /product="HD domain-containing protein"
                     /calculated_mol_wt=83270
     Region          237..>332
                     /region_name="HDc"
                     /note="Metal dependent phosphohydrolases with conserved
                     'HD' motif; cl21469"
                     /db_xref="CDD:473873"
ORIGIN      
        1 mleiienlmk fiythkkvre liyyfiista gfllfvfvll ninigvqksn lsllfnsqty
       61 yylfniyqre iaifliieqi illsfiyyqn hklnqhikns kkdelqvihi kdlsklwiee
      121 esiilndplk qslkrkyqpl ahtknedlls iahfkndnii lfleksikpy lnileseelk
      181 aivkllhile dnskvpsvvp nkndpnatyg fghlknivep ltldgktrfd ifytislldh
      241 tlevarntid tiesnknfkk kdilaqaiis alahdigkie kykmqdkskd fialkeqphh
      301 visniilyds fktlpnldqi akavinhhsg aiakedvllk llvdcdkqtr ekeihsylvk
      361 ynafeinkav tfrkniftql qtleeknnys lliikskdeq lkstaikeli qdesiinfsn
      421 ednklimliq eksknkiman iltpiisfca eegifiktil islqdieyld ktymkniike
      481 lfdhiqnket nfihyadykk ikhskisisd nstteeskth nedksskske iitqikdklq
      541 tktaqenqek ilqlktdesa eegfdiqnie kllldklknk intieyygtk neinsishkn
      601 fvlfkkscli kilgeliggd sesldrkvnf likyyknhqd edkrlvwfvn tdsgfyeslf
      661 yiyengekev fscipfeakl afnldsyele kikeksdlkk ynigkyrgek natk
//
LOCUS       WP_258107579             390 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Campylobacter lari].
ACCESSION   WP_258107579
VERSION     WP_258107579.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter lari
  ORGANISM  Campylobacter lari
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Campylobacter lari"
                     /db_xref="taxon:201"
     Protein         1..390
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=42918
     Region          15..383
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(25..26,29..30,33,65,110..111,113..115,118,137,
                     140..141,144,213,216..217,220..222,225,252,256,308..309,
                     313,317,334,337..338,341..342,345)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mhtqisykkf fwinilvvit lalnlrapit sigpmieyiq eyyninsala gmlttlplia
       61 fglisffvay fsqikalffa lclivfgeli rsyggniglf sgvfligagi aianvllpsf
      121 vkekfaknay kimglygsii glssiagval slpllkifev pqamffwvvl alialifyfp
      181 hlknkrllrp krkninkinl flnltawkvt iimglqsfls yslfawlsvm isekgfgidf
      241 gsnvlllsqi igmpvafllp ivlsklrtha ksfvivllgf lyvlsfilvf fcdvklvlll
      301 aaiflgfass gvftisllfi avkssnsfia aklsamsqgi gyliaaqapw iigmlhdsfg
      361 nftlgfimli tvaialnifv flaykapvik
//
LOCUS       WP_258107594             389 aa            linear   BCT 02-MAR-2025
DEFINITION  Mur ligase family protein [Campylobacter lari].
ACCESSION   WP_258107594
VERSION     WP_258107594.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter lari
  ORGANISM  Campylobacter lari
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 389)
  AUTHORS   Bertrand,J.A., Auger,G., Fanchon,E., Martin,L., Blanot,D., van
            Heijenoort,J. and Dideberg,O.
  TITLE     Crystal structure of UDP-N-acetylmuramoyl-L-alanine:D-glutamate
            ligase from Escherichia coli
  JOURNAL   EMBO J 16 (12), 3416-3425 (1997)
   PUBMED   9218784
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019850.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08245.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Campylobacter lari"
                     /db_xref="taxon:201"
     Protein         1..389
                     /product="Mur ligase family protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=44930
     Region          39..384
                     /region_name="PLN02881"
                     /note="tetrahydrofolylpolyglutamate synthase; cl47075"
                     /db_xref="CDD:481415"
ORIGIN      
        1 mkfqqtlsqk tmyvqkisrf fmfsmyekyk kiipktkniq iigtngkgst grflallllg
       61 qgykvghyts phifefnerf wlngkiasne llekaheele sifledikkl syfeyatfla
      121 ffifkdcdyv ileagvggey datsvfeinf svftkigfdh qdllgknlee iartklkams
      181 akalinhkqe tkvlnlakki anlkqtgldi saldenkviy pyvqeyiqky nlvsflkdnl
      241 flalevfski caknekeliq siknlpkldl kgrceqisqn ifvdvghnem aalalaeifk
      301 ekkvhlvync fldkdsykil ralkpiikiv eiyeyeskdr plagsvllen lgkldiayqk
      361 feqikkdely lvfgsfvlve nflrgyner
//
LOCUS       WP_258107738             250 aa            linear   BCT 02-MAR-2025
DEFINITION  urease accessory protein UreD [Campylobacter lari].
ACCESSION   WP_258107738
VERSION     WP_258107738.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter lari
  ORGANISM  Campylobacter lari
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 250)
  AUTHORS   Farrugia,M.A., Wang,B., Feig,M. and Hausinger,R.P.
  TITLE     Mutational and Computational Evidence That a Nickel-Transfer Tunnel
            in UreD Is Used for Activation of Klebsiella aerogenes Urease
  JOURNAL   Biochemistry 54 (41), 6392-6401 (2015)
   PUBMED   26401965
REFERENCE   2  (residues 1 to 250)
  AUTHORS   Farrugia,M.A., Macomber,L. and Hausinger,R.P.
  TITLE     Biosynthesis of the urease metallocenter
  JOURNAL   J Biol Chem 288 (19), 13178-13185 (2013)
   PUBMED   23539618
REFERENCE   3  (residues 1 to 250)
  AUTHORS   Moncrief,M.B. and Hausinger,R.P.
  TITLE     Characterization of UreG, identification of a UreD-UreF-UreG
            complex, and evidence suggesting that a nucleotide-binding site in
            UreG is required for in vivo metallocenter assembly of Klebsiella
            aerogenes urease
  JOURNAL   J Bacteriol 179 (13), 4081-4086 (1997)
   PUBMED   9209019
REFERENCE   4  (residues 1 to 250)
  AUTHORS   Neyrolles,O., Ferris,S., Behbahani,N., Montagnier,L. and
            Blanchard,A.
  TITLE     Organization of Ureaplasma urealyticum urease gene cluster and
            expression in a suppressor strain of Escherichia coli
  JOURNAL   J Bacteriol 178 (3), 647-655 (1996)
   PUBMED   8550495
  REMARK    Erratum:[J Bacteriol. 1996 May;178(9):2725. doi:
            10.1128/jb.178.9.2725-2725.1996.. PMID: 8626347]
REFERENCE   5  (residues 1 to 250)
  AUTHORS   Park,I.S., Carr,M.B. and Hausinger,R.P.
  TITLE     In vitro activation of urease apoprotein and role of UreD as a
            chaperone required for nickel metallocenter assembly
  JOURNAL   Proc Natl Acad Sci U S A 91 (8), 3233-3237 (1994)
   PUBMED   7909161
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10002853
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Campylobacter lari"
                     /db_xref="taxon:201"
     Protein         1..250
                     /product="urease accessory protein UreD"
                     /GO_function="GO:0016151 - nickel cation binding [Evidence
                     IEA]"
                     /GO_process="GO:0008152 - metabolic process [Evidence
                     IEA]"
                     /calculated_mol_wt=29378
     Region          10..235
                     /region_name="UreH"
                     /note="Urease accessory protein UreH [Posttranslational
                     modification, protein turnover, chaperones]; COG0829"
                     /db_xref="CDD:440591"
ORIGIN      
        1 mfaqksvfkl tldtinekti iknsfftppf klmrnfydkk ltsiyvlnss agifkedhls
       61 feiickkstn tailtqsyek vydtkdsfas knidftleen asffympkpl llqenanfiq
      121 ntkinlasfs rlvyvdfvif grvamdekfv fknyesltqi yrndtlilnd kikinpsymk
      181 endlnffanh thylsiylfg ydefyeelka sfddinqlfy eglcikilsn esekllllqd
      241 klfkfcqnki
//
LOCUS       WP_258107753             278 aa            linear   BCT 02-MAR-2025
DEFINITION  metal ABC transporter solute-binding protein, Zn/Mn family
            [Campylobacter lari].
ACCESSION   WP_258107753
VERSION     WP_258107753.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter lari
  ORGANISM  Campylobacter lari
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 278)
  AUTHORS   Ilari,A., Alaleona,F., Tria,G., Petrarca,P., Battistoni,A.,
            Zamparelli,C., Verzili,D., Falconi,M. and Chiancone,E.
  TITLE     The Salmonella enterica ZinT structure, zinc affinity and
            interaction with the high-affinity uptake protein ZnuA provide
            insight into the management of periplasmic zinc
  JOURNAL   Biochim Biophys Acta 1840 (1), 535-544 (2014)
   PUBMED   24128931
REFERENCE   2  (residues 1 to 278)
  AUTHORS   Gabbianelli,R., Scotti,R., Ammendola,S., Petrarca,P., Nicolini,L.
            and Battistoni,A.
  TITLE     Role of ZnuABC and ZinT in Escherichia coli O157:H7 zinc
            acquisition and interaction with epithelial cells
  JOURNAL   BMC Microbiol 11, 36 (2011)
   PUBMED   21338480
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 278)
  AUTHORS   Lee,Y.H., Deka,R.K., Norgard,M.V., Radolf,J.D. and Hasemann,C.A.
  TITLE     Treponema pallidum TroA is a periplasmic zinc-binding protein with
            a helical backbone
  JOURNAL   Nat Struct Biol 6 (7), 628-633 (1999)
   PUBMED   10404217
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013465.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01297.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Campylobacter lari"
                     /db_xref="taxon:201"
     Protein         1..278
                     /product="metal ABC transporter solute-binding protein,
                     Zn/Mn family"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=31892
     Region          16..275
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(83..84,87,139)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238347"
ORIGIN      
        1 mrvlflclis flsiyakdlv svsiapqayf vkqiakdtld inivippnan ehtfefkpsg
       61 ilkleksdiy ftanlefeki wilklkdnlk ntkiistqng idfiplqeha heghhhhgdd
      121 phtwldplla kthaknitla lieqypqnka fyeqnlenfl kemdalnlqi qalfknvknk
      181 hflvyhpswg yfakryhlsq ipveiegkep kpkdlaklak liqkeqikai fvpkgannnt
      241 ieamasnynl kiieldhlss dyknellkda knitsvlq
//
LOCUS       WP_258107934             478 aa            linear   BCT 02-MAR-2025
DEFINITION  conjugal transfer protein TraH [Campylobacter lari].
ACCESSION   WP_258107934
VERSION     WP_258107934.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter lari
  ORGANISM  Campylobacter lari
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 478)
  AUTHORS   Lawley,T.D., Gilmour,M.W., Gunton,J.E., Standeven,L.J. and
            Taylor,D.E.
  TITLE     Functional and mutational analysis of conjugative transfer region 1
            (Tra1) from the IncHI1 plasmid R27
  JOURNAL   J Bacteriol 184 (8), 2173-2180 (2002)
   PUBMED   11914349
REFERENCE   2  (residues 1 to 478)
  AUTHORS   Maneewannakul,S., Maneewannakul,K. and Ippen-Ihler,K.
  TITLE     Characterization, localization, and sequence of F transfer region
            products: the pilus assembly gene product TraW and a new product,
            TrbI
  JOURNAL   J Bacteriol 174 (17), 5567-5574 (1992)
   PUBMED   1355084
REFERENCE   3  (residues 1 to 478)
  AUTHORS   Ham,L.M., Firth,N. and Skurray,R.
  TITLE     Nucleotide sequence of the F plasmid transfer gene, traH:
            identification of a new gene and a promoter within the transfer
            operon
  JOURNAL   Gene 75 (1), 157-165 (1989)
   PUBMED   2656408
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017892.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06122.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Campylobacter lari"
                     /db_xref="taxon:201"
     Protein         1..478
                     /product="conjugal transfer protein TraH"
                     /calculated_mol_wt=53113
     Region          31..399
                     /region_name="TraH"
                     /note="Conjugative relaxosome accessory transposon
                     protein; cl05580"
                     /db_xref="CDD:446722"
     Region          411..>473
                     /region_name="zf-C4H2"
                     /note="Zinc finger-containing protein; pfam10146"
                     /db_xref="CDD:462963"
ORIGIN      
        1 menikklsls fiasvciass ahssmssfvq nnlgttitse nagyyksqvs gfisggsarv
       61 rwgggetiqp fsvqapsfnv gcsgidmvfg gfsylnfehl veklkkiaaa apafafkial
      121 stlckdcdti mselekiana insmnfdtcq mtnnwtnnia gmlnldlqgg qsdswltgfk
      181 nvsegtqatv drfvnwvngt npsskekpak qllsqgsllk kalengkdaf fkkafgeqey
      241 edigrgllgd ivsytttets ptgeanketk vliirptiga erfidlvwns nnqdikskqi
      301 dytaytisee anglykepvg kkavlkmdks mrdiliesfr tivtkisaqt alddedmsfv
      361 ssaplpvvdi lnieaigmtf gdeiyefval lmfdafiqel freytdmlfi iqnedkkfal
      421 dhqediremn tqvrsiraei nklmdkiqlk dstknkklde vrkllreyfk lsdsynak
//
LOCUS       WP_258107936             701 aa            linear   BCT 02-MAR-2025
DEFINITION  conjugal transfer protein TraN [Campylobacter lari].
ACCESSION   WP_258107936
VERSION     WP_258107936.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter lari
  ORGANISM  Campylobacter lari
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 701)
  AUTHORS   Frost,L.S., Leplae,R., Summers,A.O. and Toussaint,A.
  TITLE     Mobile genetic elements: the agents of open source evolution
  JOURNAL   Nat Rev Microbiol 3 (9), 722-732 (2005)
   PUBMED   16138100
REFERENCE   2  (residues 1 to 701)
  AUTHORS   Lawley,T.D., Klimke,W.A., Gubbins,M.J. and Frost,L.S.
  TITLE     F factor conjugation is a true type IV secretion system
  JOURNAL   FEMS Microbiol Lett 224 (1), 1-15 (2003)
   PUBMED   12855161
REFERENCE   3  (residues 1 to 701)
  AUTHORS   Maneewannakul,S., Kathir,P. and Ippen-Ihler,K.
  TITLE     Characterization of the F plasmid mating aggregation gene traN and
            of a new F transfer region locus trbE
  JOURNAL   J Mol Biol 225 (2), 299-311 (1992)
   PUBMED   1593622
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018666.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06986.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Campylobacter lari"
                     /db_xref="taxon:201"
     gene            1..701
                     /gene="traN"
     Protein         1..701
                     /product="conjugal transfer protein TraN"
                     /calculated_mol_wt=78339
     Region          36..183
                     /region_name="CLECT_VCBS"
                     /note="A bacterial subgroup of the C-type lectin-like
                     (CTLD) domain; a subgroup of bacterial protein domains
                     homologous to the carbohydrate-recognition domains (CRDs)
                     of the C-type lectins; cd03603"
                     /db_xref="CDD:153073"
     Site            order(147,151,153,160,162..165,175..177)
                     /site_type="other"
                     /note="ligand binding surface [chemical binding]"
                     /db_xref="CDD:153073"
     Region          <538..688
                     /region_name="PRK12355"
                     /note="type-F conjugative transfer system mating-pair
                     stabilization protein TraN"
                     /db_xref="CDD:237072"
ORIGIN      
        1 mfklkhlcli lsmsfsfsqa giqctdyndf kefgghyytv svkkltflda qalaeksggy
       61 laipntkden nfitslvkgg eyawigihdp sytsnyckeg agcfydtsrf ktvknealty
      121 qkwsekqpdn llkqydivds kervsplgeh wvalaspsgk wadfgnhfgd innpikhyav
      181 yefesippcy dkptpdpedp ilngffcnsa isddpnfkpe nigkstsciq nehnkesyfc
      241 pmqltqcvdk dysidgssek ieggvldtki qkitlkfssg yvghnswkvi esffhikdik
      301 eidsfkltya gaddwvavfa pnsnisvinn ypyidevkdn gkalvyipyr pngeytelgk
      361 ysgkklniel kkylrnglnk gvaffatvgt gswdiiyeay gknikcddfg qtvctqeeik
      421 vsysaykytc pegyqakedg gncnpssidd lidtdgdgig dscnsstppa nncvkstkvc
      481 pfneerecdl idnkyqcspf pciegsndiq vddtkvgind annngweddg scggqilifn
      541 gqdnrcrskd kffglfgggc cdkdkvfigl ipckedekkl aklnkdnrcv qigeycskki
      601 pfvgciqnkt tfccfnskla rifneqgrpq igrgwgspks pdcrgftpee fqkldfseid
      661 lsefiadivg sidvdkiqad sikiqekies nlenltrkpt n
//
LOCUS       WP_258107939             226 aa            linear   BCT 02-MAR-2025
DEFINITION  endonuclease [Campylobacter lari].
ACCESSION   WP_258107939
VERSION     WP_258107939.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter lari
  ORGANISM  Campylobacter lari
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 226)
  AUTHORS   Jekel,M. and Wackernagel,W.
  TITLE     The periplasmic endonuclease I of Escherichia coli has amino-acid
            sequence homology to the extracellular DNases of Vibrio cholerae
            and Aeromonas hydrophila
  JOURNAL   Gene 154 (1), 55-59 (1995)
   PUBMED   7867949
REFERENCE   2  (residues 1 to 226)
  AUTHORS   Nakamura,A., Koide,Y., Miyazaki,H., Kitamura,A., Masaki,H.,
            Beppu,T. and Uozumi,T.
  TITLE     Gene cloning and characterization of a novel extracellular
            ribonuclease of Bacillus subtilis
  JOURNAL   Eur J Biochem 209 (1), 121-127 (1992)
   PUBMED   1396690
REFERENCE   3  (residues 1 to 226)
  AUTHORS   Focareta,T. and Manning,P.A.
  TITLE     Extracellular proteins of Vibrio cholerae: molecular cloning,
            nucleotide sequence and characterization of the deoxyribonuclease
            (DNase) together with its periplasmic localization in Escherichia
            coli K-12
  JOURNAL   Gene 53 (1), 31-40 (1987)
   PUBMED   3036665
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016146.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04231.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Campylobacter lari"
                     /db_xref="taxon:201"
     Protein         1..226
                     /product="endonuclease"
                     /GO_function="GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /calculated_mol_wt=26611
     Region          42..217
                     /region_name="HNHc"
                     /note="HNH nucleases; HNH endonuclease signature which is
                     found in viral, prokaryotic, and eukaryotic proteins. The
                     alignment includes members of the large group of homing
                     endonucleases, yeast intron 1 protein, MutS, as well as
                     bacterial colicins, pyocins, and...; cl00083"
                     /db_xref="CDD:469607"
ORIGIN      
        1 mkkllsillf sslsllasdn fneskkelve lyeslgstyq ydfycnapfk ankkgkytkf
       61 evvksdlytp rneytkkgki nqrskriewe himpaqnfgk hlpcwreggr kacqndslft
      121 kmeadkqnlv paigevngdr snfryaeapl nleytqygnc kvytdfktkr fypanyskgw
      181 iarsylymsk tynirlsdqe rklmeswdkq ypmsekerii rekssk
//
LOCUS       WP_258108069             212 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5644 domain-containing protein [Campylobacter lari].
ACCESSION   WP_258108069
VERSION     WP_258108069.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter lari
  ORGANISM  Campylobacter lari
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037395.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18712.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Campylobacter lari"
                     /db_xref="taxon:201"
     Protein         1..212
                     /product="DUF5644 domain-containing protein"
                     /calculated_mol_wt=25447
     Region          1..>107
                     /region_name="SdhB/FrdB"
                     /note="Succinate dehydrogenase/fumarate reductase, Fe-S
                     protein subunit [Energy production and conversion];
                     COG0479"
                     /db_xref="CDD:440247"
     Region          <137..205
                     /region_name="DUF5644"
                     /note="Family of unknown function (DUF5644); pfam18712"
                     /db_xref="CDD:436685"
ORIGIN      
        1 mqitlrifrf nkdsdylayy kpyvydsknf ksvydilvqv kkddiyfdfe enpescikin
       61 qvalrqrrdl nniiekfgke liiepldtkr atkdlimdks dfleklelfk glidihdiel
      121 ykqydflyyt seireflpey lgdsffifay kmllkypeka pqflklvade ekgiyyhtkf
      181 knfissneld yesyikelkv mlvksglars if
//
LOCUS       WP_258108076             250 aa            linear   BCT 02-MAR-2025
DEFINITION  TSUP family transporter [Campylobacter lari].
ACCESSION   WP_258108076
VERSION     WP_258108076.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter lari
  ORGANISM  Campylobacter lari
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 250)
  AUTHORS   Krejcik,Z., Denger,K., Weinitschke,S., Hollemeyer,K., Paces,V.,
            Cook,A.M. and Smits,T.H.
  TITLE     Sulfoacetate released during the assimilation of taurine-nitrogen
            by Neptuniibacter caesariensis: purification of sulfoacetaldehyde
            dehydrogenase
  JOURNAL   Arch Microbiol 190 (2), 159-168 (2008)
   PUBMED   18506422
REFERENCE   2  (residues 1 to 250)
  AUTHORS   Weinitschke,S., Denger,K., Cook,A.M. and Smits,T.H.M.
  TITLE     The DUF81 protein TauE in Cupriavidus necator H16, a sulfite
            exporter in the metabolism of C2 sulfonates
  JOURNAL   Microbiology (Reading) 153 (Pt 9), 3055-3060 (2007)
   PUBMED   17768248
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014035.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01925.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Campylobacter lari"
                     /db_xref="taxon:201"
     Protein         1..250
                     /product="TSUP family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=26817
     Region          7..247
                     /region_name="DsbD"
                     /note="Cytochrome C biogenesis protein transmembrane
                     region; cl21514"
                     /db_xref="CDD:473893"
ORIGIN      
        1 meleltyyvi lffvaafagc vdaivggggl itipalfacg ipphlalatn klqstfgslt
       61 avlayrksmh iekialgilf taigaaigty avllidqnav kiivliclvl iflytifkpd
      121 lghvhnkakm sttsfqiifg lllgfydgfl gpgtgsfwif acviflgfsm knasintkil
      181 nftsnvvalg vflysyevlw kvgilmgigq ilgafvgskl vlktqgtfik klfltmvalt
      241 iakvaydyla
//
LOCUS       WP_258107164            1258 aa            linear   BCT 02-MAR-2025
DEFINITION  lectin like domain-containing protein [Christensenella minuta].
ACCESSION   WP_258107164
VERSION     WP_258107164.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 1258)
  AUTHORS   Bradshaw,W.J., Kirby,J.M., Thiyagarajan,N., Chambers,C.J.,
            Davies,A.H., Roberts,A.K., Shone,C.C. and Acharya,K.R.
  TITLE     The structure of the cysteine protease and lectin-like domains of
            Cwp84, a surface layer-associated protein from Clostridium
            difficile
  JOURNAL   Acta Crystallogr D Biol Crystallogr 70 (Pt 7), 1983-1993 (2014)
   PUBMED   25004975
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037272.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18560.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1258
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..1258
                     /product="lectin like domain-containing protein"
                     /calculated_mol_wt=133101
     Region          154..223
                     /region_name="CHB_HEX_C_1"
                     /note="Chitobiase/beta-hexosaminidase C-terminal domain;
                     pfam13290"
                     /db_xref="CDD:433091"
     Region          238..308
                     /region_name="CHB_HEX_C_1"
                     /note="Chitobiase/beta-hexosaminidase C-terminal domain;
                     pfam13290"
                     /db_xref="CDD:433091"
     Region          425..821
                     /region_name="COG4870"
                     /note="Cysteine protease, C1A family [Posttranslational
                     modification, protein turnover, chaperones]"
                     /db_xref="CDD:443898"
     Region          657..810
                     /region_name="Lectin_like"
                     /note="Lectin like domain; pfam18560"
                     /db_xref="CDD:465802"
     Region          873..>915
                     /region_name="Peptidase_C1"
                     /note="C1 Peptidase family (MEROPS database nomenclature),
                     also referred to as the papain family; composed of two
                     subfamilies of cysteine peptidases (CPs), C1A (papain) and
                     C1B (bleomycin hydrolase). Papain-like enzymes are mostly
                     endopeptidases with some...; cl23744"
                     /db_xref="CDD:451520"
ORIGIN      
        1 mkrtvclllt vvlavsavfs casfafaeeg paklslvfen cdppeegdly aaeedttvri
       61 adtapagget iyymlmftlk nkearmteri pytgtvslre aiaqavadgv ltqeefdgvg
      121 vafidvtage eydpvasgna rfmpaackpv afgpaageyp agtrlglsse tadaeiyytl
      181 dgtspklpga slynpadklt laedsrilas arkaglksse pasaaytvqk sgtvtadpap
      241 gtvaagtqvt lrasaedeki lyttdgtvpa qgaagtvdsg sataavmidr dtvinartyk
      301 dgtapgdvqr fsytaggagd ayepndtqet aasvsfpski ratihsaedv dyykfhysya
      361 tpielllfqp deegaayslt llgsggaeva asalagdqri taelaegdyy avvkspdghf
      421 sakeytlavs kqaaegldfs eynmlnamln adssedcytp aegrggvlsg gdiymalayl
      481 arwsgpvlee ddpymldefg gdvseftyhq lparyhlrqa illpdrekta edtlhyknai
      541 ytygaiycgi rhqegeggyy datgsyyfkp eadmagggha islvgwddtv paeqftvtvd
      601 gkpytpagdg afiaknnygt ekgqngffyi syysadlsan paaavfvddp andydniyqy
      661 dplgytnlye psqysrgkvl ytknvftaad rqdvkavsfy smhedqdydv ylevngetrh
      721 vasgthkykg yytvelgegl pvgageefsv tvrlqnrdgs dvvaavempi tgrsdraraq
      781 agqsftstdg rdwtdisaky sanncikaft dgagggtdds sqggagrafs aaqlesagel
      841 sapaaaadsa snsgqnktsi lpqgrtadpv tklpekfdlr digavtpvkn qgwipscwtf
      901 atmssaesil lrqnniaeqm gvesvsidsa dtvclevgqt adfsaaaavt pneeefsgir
      961 wsyagdldsi dirteagrsg etavlftaka tgtvvvtats taddtrsvsk tvtivqeaqi
     1021 pgaegkeivs lpkreggldl gkikealsal spqqallipv gegtavpqei feqikgqdkt
     1081 iifavlddag kvvarfvfhg tdiaaamdms lafsntpgea aknaavfpqg tkllflnfgh
     1141 sgalpgkatv svlavppfga geetylyyfn gtgyddistq nvdsagyaaf tlrhcseyvl
     1201 anrkqaessv paddgakqed gpqtgdtkdm tpwiviaiia gaaaaaavil llrrragk
//
LOCUS       WP_258108138             550 aa            linear   BCT 02-MAR-2025
DEFINITION  4Fe-4S dicluster domain-containing protein [Campylobacter lari].
ACCESSION   WP_258108138
VERSION     WP_258108138.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter lari
  ORGANISM  Campylobacter lari
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024247.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12838.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Campylobacter lari"
                     /db_xref="taxon:201"
     Protein         1..550
                     /product="4Fe-4S dicluster domain-containing protein"
                     /calculated_mol_wt=62355
     Region          <188..281
                     /region_name="PRK08348"
                     /note="NADH-plastoquinone oxidoreductase subunit;
                     Provisional"
                     /db_xref="CDD:181399"
     Region          <332..465
                     /region_name="NapF"
                     /note="Ferredoxin [Energy production and conversion];
                     COG1145"
                     /db_xref="CDD:440760"
     Region          412..>465
                     /region_name="COG1149"
                     /note="MinD superfamily P-loop ATPase, contains an
                     inserted ferredoxin domain [General function prediction
                     only]"
                     /db_xref="CDD:440763"
     Region          415..539
                     /region_name="PRK12387"
                     /note="formate hydrogenlyase complex iron-sulfur subunit;
                     Provisional"
                     /db_xref="CDD:183492"
ORIGIN      
        1 mkdfvflene dliplsddis ivqkacneev fignskllnp evyapeinfy lknsqddalk
       61 kaktieslyk irskvydlgl dleytkevgk nviivsnedq nelieslkkq eykvlklsne
      121 qclgvlgcvg elcvialkdd eqveidcdff lydvkkesfd qqsgcydltt lsqeeiikll
      181 nsnspkykfr nyisyddsic qyherrsvhc gkcaeicpsv ailkddeqrk lefshvdcls
      241 cgdcvgicps galdyapmpr nsfyeilkfy edkiiliipe kmsienlnit lkedvmpfmi
      301 kgenyldqah flamlqtsga svifysdgls qgalevialt neifqrkfkq naiflakdek
      361 elleainqah fienlkfisy nptllkredf airlrefike enlgnipske wirygkitin
      421 tdtctlclsc vgacnvgalv adtkdnslkf naslcttcgy ceascaekdt lmlqrsgidl
      481 ekeyfsfmvl aqdelfacve cgkefatkka iekiasimkp rfmgdeakik tlyccaecka
      541 kvmiqsmnvl
//
LOCUS       WP_258108285             375 aa            linear   BCT 02-MAR-2025
DEFINITION  c-type cytochrome [Campylobacter lari].
ACCESSION   WP_258108285
VERSION     WP_258108285.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter lari
  ORGANISM  Campylobacter lari
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012264.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00034.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Campylobacter lari"
                     /db_xref="taxon:201"
     Protein         1..375
                     /product="c-type cytochrome"
                     /GO_function="GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=41666
     Region          <80..>126
                     /region_name="TsdA"
                     /note="Thiosulfate dehydrogenase TsdA, contains C-terminal
                     cytochrome c domain [Inorganic ion transport and
                     metabolism]; COG3258"
                     /db_xref="CDD:442489"
     Region          106..206
                     /region_name="Cytochrom_C"
                     /note="Cytochrome c; pfam00034"
                     /db_xref="CDD:459641"
     Region          253..375
                     /region_name="CYT1"
                     /note="Cytochrome c1 [Energy production and conversion];
                     COG2857"
                     /db_xref="CDD:442105"
ORIGIN      
        1 mrelkiffvv vfftglvywg vepyahsvmn ppstpvnfdf akadaeftkg evalkekaam
       61 danasgseka ianaqkalel aksqeeatkq lwekiakidf tkgnaqkgke lfegnciach
      121 gvkaagipat itdsslgvtp pdlsdagaiy dekfltalii dpvkalqish kfndenpflm
      181 payplsgdev qdnqdladli affkntasey ekefdaklka dleekyaknq elseqaktal
      241 iakefdfakn khtfenacgr chdvkydgfv sssnmsdlkn ylgmtppdls mmirskgahy
      301 leifinepqk kihgtamprv glnekaqtqv inylekvgds kkeereqtgi yimiffails
      361 ifaigwkrsv wsklh
//
LOCUS       WP_258108328             372 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Campylobacter
            lari].
ACCESSION   WP_258108328
VERSION     WP_258108328.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter lari
  ORGANISM  Campylobacter lari
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 372)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Campylobacter lari"
                     /db_xref="taxon:201"
     Protein         1..372
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=42784
     Region          35..363
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(40,42..43,45,69..71,117..119,159..161,192,196,
                     219..222)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187541"
     Site            order(137,161,192,196)
                     /site_type="active"
                     /db_xref="CDD:187541"
ORIGIN      
        1 mksysclenp iaiedleyiy nsltkvekqk fdnstilftg cagflgfyfi nffvkyskdl
       61 nikkiialdn fmlrkpkwle qlsndysdil elhkfdiind kidllkdays adliihaasi
      121 aspmfyrtyp ietldaniwg lrslldfykn knikgflffs sseiygdpdv skiptdeeyr
      181 gnvacigpra cydeskrfge tmcslfaqkf nmpitiarpf nnygpgmsig dkrvpadfak
      241 aviegkniei lsdgspkrtf cyiadaiagy lkvlvygkfd yfnigidkpe isvkelsyiy
      301 akyskeifnf epqvnfavse dknylkdnpn rrcpiidkar nklqynptil vedgvrrflk
      361 flkfekenge ll
//
LOCUS       WP_258108354              80 aa            linear   BCT 02-MAR-2025
DEFINITION  conjugal transfer protein TraN [Campylobacter lari].
ACCESSION   WP_258108354
VERSION     WP_258108354.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter lari
  ORGANISM  Campylobacter lari
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 80)
  AUTHORS   Frost,L.S., Leplae,R., Summers,A.O. and Toussaint,A.
  TITLE     Mobile genetic elements: the agents of open source evolution
  JOURNAL   Nat Rev Microbiol 3 (9), 722-732 (2005)
   PUBMED   16138100
REFERENCE   2  (residues 1 to 80)
  AUTHORS   Lawley,T.D., Klimke,W.A., Gubbins,M.J. and Frost,L.S.
  TITLE     F factor conjugation is a true type IV secretion system
  JOURNAL   FEMS Microbiol Lett 224 (1), 1-15 (2003)
   PUBMED   12855161
REFERENCE   3  (residues 1 to 80)
  AUTHORS   Maneewannakul,S., Kathir,P. and Ippen-Ihler,K.
  TITLE     Characterization of the F plasmid mating aggregation gene traN and
            of a new F transfer region locus trbE
  JOURNAL   J Mol Biol 225 (2), 299-311 (1992)
   PUBMED   1593622
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018666.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06986.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Campylobacter lari"
                     /db_xref="taxon:201"
     gene            1..80
                     /gene="traN"
     Protein         1..80
                     /product="conjugal transfer protein TraN"
                     /calculated_mol_wt=8968
     Region          <3..67
                     /region_name="PRK12355"
                     /note="type-F conjugative transfer system mating-pair
                     stabilization protein TraN"
                     /db_xref="CDD:237072"
ORIGIN      
        1 mfneqgrpqi krgwgspksp dcrgftpeef qkldfseidl sefiadiags idvdkiqads
       61 ikiqekiesn lenltrkptn
//
LOCUS       WP_258108458             434 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: AAA family ATPase [Campylobacter].
ACCESSION   WP_258108458
VERSION     WP_258108458.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter
  ORGANISM  Campylobacter
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae.
REFERENCE   1  (residues 1 to 434)
  AUTHORS   Levitz,R., Chapman,D., Amitsur,M., Green,R., Snyder,L. and
            Kaufmann,G.
  TITLE     The optional E. coli prr locus encodes a latent form of phage
            T4-induced anticodon nuclease
  JOURNAL   EMBO J 9 (5), 1383-1389 (1990)
   PUBMED   1691706
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024565.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13166.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Campylobacter"
                     /db_xref="taxon:194"
     Protein         1..434
                     /product="AAA family ATPase"
                     /calculated_mol_wt=51405
     Region          <171..418
                     /region_name="RloC"
                     /note="Wobble nucleotide-excising tRNase [Translation,
                     ribosomal structure and biogenesis]; COG4694"
                     /db_xref="CDD:443729"
ORIGIN      
        1 msinvpeiis keeykkltnk tlnkpdfqqy kstvtnnykr sndqteyhlk eglaeqvlik
       61 ldfifkrige sqfenleeia kyfrmmldee rkkyillfay ngtgktrlsa efktlgqmln
      121 eetgektadt lyynaftedl fywdndlend tdrflklnsd srffsglkel emesrirpfl
      181 hrytdfdfti dydeykisfy rnvtiegvsq ridnikvsrg eenifvwcff laimqlvvdk
      241 eesyswvkyi yiddpissld dnnviavash lvnlmsdadi kvvisshhtl fynvlcneid
      301 nperlffqrl tknglyilkd tsntplfyhv sllkelkkva dsgkiynyhf nilrnvlekt
      361 aafhgyqhfs sclrkldndd dfivhkrmvn imshgnysvf epapltddnk eyfrnildnf
      421 ledykfnqki fdte
//
LOCUS       WP_258108529              63 aa            linear   BCT 02-MAR-2025
DEFINITION  cation transporter [Campylobacter lari].
ACCESSION   WP_258108529
VERSION     WP_258108529.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter lari
  ORGANISM  Campylobacter lari
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 63)
  AUTHORS   Rosenzweig,A.C., Huffman,D.L., Hou,M.Y., Wernimont,A.K.,
            Pufahl,R.A. and O'Halloran,T.V.
  TITLE     Crystal structure of the Atx1 metallochaperone protein at 1.02 A
            resolution
  JOURNAL   Structure 7 (6), 605-617 (1999)
   PUBMED   10404590
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012621.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00403.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..63
                     /organism="Campylobacter lari"
                     /db_xref="taxon:201"
     Protein         1..63
                     /product="cation transporter"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=7001
     Region          1..63
                     /region_name="CopZ"
                     /note="Copper chaperone CopZ [Inorganic ion transport and
                     metabolism]; COG2608"
                     /db_xref="CDD:442020"
ORIGIN      
        1 miiktkninc qscvnlikas ledefgtmqi nvetksieid lkaeqvgefk kqlqelgfei
       61 dna
//
LOCUS       WP_258108619             324 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6531 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_258108619
VERSION     WP_258108619.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040127.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20148.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>324
                     /product="DUF6531 domain-containing protein"
     Region          4..>324
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
ORIGIN      
        1 mgggkpaarq gdmtrkgldi vqgsagvlig aptgvacsvc htkkdspnyg spvnpllgak
       61 vlpvetdlal pgplpfilfr ayssyrtrtp apvgvfgpgw kapfdirlqi rdeglilnds
      121 ggrsihfepl fpgeisysrs esfwlarggv lkqhkghpla rlwralpeav rlsphtymma
      181 vsttgqwlil gwpervpead evpppeppay rvltgvvdgf grtlafhraa kgdvagavtg
      241 vtdgagrrfh lalttqaqra eafrkqrass lsspasprsv sssqvfpdtl pagteygadn
      301 girleavwlt hdpaypdeqp tapl
//
LOCUS       WP_258108634             175 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Escherichia coli].
ACCESSION   WP_258108634
VERSION     WP_258108634.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 175)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 175)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>175
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          <1..>175
                     /region_name="VI_Rhs_Vgr"
                     /note="type VI secretion system Vgr family protein;
                     TIGR03361"
                     /db_xref="CDD:274542"
ORIGIN      
        1 ipwnpntrte vstlcisqfr ysaqirpssv vtkdytfkrp gwagrfeqeg qhqdyqrtqy
       61 evydypgrfk gahgqnfarw qmdgwrnnae vargtsrspe iwpgrrivlt ghpqanlnre
      121 wqvvaselhg eqpqavpgrq gagtalenhf avipadrtwr pqpllkplvd gpqsa
//
LOCUS       WP_258108640             125 aa            linear   BCT 02-MAR-2025
DEFINITION  Ail/Lom family outer membrane beta-barrel protein, partial
            [Escherichia coli].
ACCESSION   WP_258108640
VERSION     WP_258108640.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 125)
  AUTHORS   Miller,V.L., Beer,K.B., Heusipp,G., Young,B.M. and Wachtel,M.R.
  TITLE     Identification of regions of Ail required for the invasion and
            serum resistance phenotypes
  JOURNAL   Mol Microbiol 41 (5), 1053-1062 (2001)
   PUBMED   11555286
REFERENCE   2  (residues 1 to 125)
  AUTHORS   Barondess,J.J. and Beckwith,J.
  TITLE     A bacterial virulence determinant encoded by lysogenic coliphage
            lambda
  JOURNAL   Nature 346 (6287), 871-874 (1990)
   PUBMED   2144037
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06316.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>125
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /GO_component="GO:0044384 - host outer membrane [Evidence
                     IEA]"
     Region          1..>125
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mrklyaails aaiclavsga pawasehqst lsagylhast nvpgsddlng invkyryeft
       61 dtlgmvtsfs yagdnnrqlt hysdtrwhed svrnrwfsvm agpsvrvnew fsayamagva
      121 ysrvs
//
LOCUS       WP_258108694             293 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Campylobacter lari].
ACCESSION   WP_258108694
VERSION     WP_258108694.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter lari
  ORGANISM  Campylobacter lari
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 293)
  AUTHORS   Ollis,D.L., Cheah,E., Cygler,M., Dijkstra,B., Frolow,F.,
            Franken,S.M., Harel,M., Remington,S.J., Silman,I., Schrag,J. et al.
  TITLE     The alpha/beta hydrolase fold
  JOURNAL   Protein Eng 5 (3), 197-211 (1992)
   PUBMED   1409539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00561.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Campylobacter lari"
                     /db_xref="taxon:201"
     Protein         1..293
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=34225
     Region          <118..241
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     Site            192..196
                     /site_type="active"
                     /note="nucleophilic elbow [active]"
                     /db_xref="CDD:238382"
ORIGIN      
        1 mffdlqsfia lsqktnltsq ekllllklht hfeknidllq klydyslvay canvylnqsl
       61 qkeglqkhka iikaltnpfy kkekipvggl nnaflalkfv knyeilehin ethpqskmgf
      121 rasfiydkkr knyilafags dlnplcfdfk dlysdflill nktpkgqiqs mqyfynqlkq
      181 kytidknlii ighslggyla qtfartfpst ikevyalqap glnqnfqnls yinfhintth
      241 nlnfktykww nfnfvqklyk kdskeillht gsikhhpsvc iyklhelfki lnp
//
LOCUS       WP_258108703             229 aa            linear   BCT 02-MAR-2025
DEFINITION  ion channel [Campylobacter lari].
ACCESSION   WP_258108703
VERSION     WP_258108703.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter lari
  ORGANISM  Campylobacter lari
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 229)
  AUTHORS   Choe,S.
  TITLE     Potassium channel structures
  JOURNAL   Nat Rev Neurosci 3 (2), 115-121 (2002)
   PUBMED   11836519
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019500.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07885.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Campylobacter lari"
                     /db_xref="taxon:201"
     Protein         1..229
                     /product="ion channel"
                     /calculated_mol_wt=26445
     Region          <159..>221
                     /region_name="PRK10537"
                     /note="voltage-gated potassium channel protein"
                     /db_xref="CDD:236711"
ORIGIN      
        1 mlyhrllnhy isiyhkstkr flfvwtllav vplfcsflfd elaiyatgki tseilfliln
       61 iipimvaial mmfllisiwa afssminike kffiilyayv liwfaygnly yfscdvdnyn
      121 rmliatqkne nldivdlqek iievqfqtpi rgihnfwsln delkpqiqnr ikglvdcyyf
      181 sgvtmltigf gdvtpvssll rlfsvfqgfl gqvivviamg lwinqagkq
//
LOCUS       WP_258108846             424 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4910 domain-containing protein [Campylobacter lari].
ACCESSION   WP_258108846
VERSION     WP_258108846.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter lari
  ORGANISM  Campylobacter lari
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16254.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Campylobacter lari"
                     /db_xref="taxon:201"
     Protein         1..424
                     /product="DUF4910 domain-containing protein"
                     /calculated_mol_wt=48364
     Region          4..424
                     /region_name="COG4310"
                     /note="Uncharacterized conserved protein, cotains an
                     aminopeptidase-like domain [General function prediction
                     only]"
                     /db_xref="CDD:443451"
ORIGIN      
        1 msksmyelac elfpicrsit gkgfrqslki ldeamgedil kihsiasgsk vfdwevpaew
       61 eindayiitp dgekicdfkq nnlhvlnyse gidtelnlas lqehlysiee mpdaipyvts
      121 yykkrwgfci khedrvklke gkykvfidak hhengilnya dllipstqkt kdeilistyl
      181 chpsmannel sgpvvatflt kwllglkerk ynyrfvfape tigsivylsk hlkhlqkhtk
      241 agfalscigd dnayslihtp sentladkva lhtlkdknnf kefsfldrgs derqycsplv
      301 nlpvvcvcrt rfgdykeyht skddlsfise eglqgglkam qeiimnlevn eiyqntvfce
      361 pnlgkrdlyh tintsstndi piscnflayc dgkndvldia sklniqtyel kdlveklkfh
      421 glik
//
LOCUS       WP_258107217             349 aa            linear   BCT 02-MAR-2025
DEFINITION  phage distal tail protein domain-containing protein, partial
            [Christensenella minuta].
ACCESSION   WP_258107217
VERSION     WP_258107217.1
KEYWORDS    RefSeq.
SOURCE      Christensenella minuta
  ORGANISM  Christensenella minuta
            Bacteria; Bacillati; Bacillota; Clostridia; Christensenellales;
            Christensenellaceae; Christensenella.
REFERENCE   1  (residues 1 to 349)
  AUTHORS   Spinelli,S., Tremblay,D., Moineau,S., Cambillau,C. and Goulet,A.
  TITLE     Structural Insights into Lactococcal Siphophage p2 Baseplate
            Activation Mechanism
  JOURNAL   Viruses 12 (8), 878 (2020)
   PUBMED   32796652
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 349)
  AUTHORS   Sciara,G., Bebeacua,C., Bron,P., Tremblay,D., Ortiz-Lombardia,M.,
            Lichiere,J., van Heel,M., Campanacci,V., Moineau,S. and
            Cambillau,C.
  TITLE     Structure of lactococcal phage p2 baseplate and its mechanism of
            activation
  JOURNAL   Proc Natl Acad Sci U S A 107 (15), 6852-6857 (2010)
   PUBMED   20351260
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028084.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16774.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Christensenella minuta"
                     /db_xref="taxon:626937"
     Protein         1..>349
                     /product="phage distal tail protein domain-containing
                     protein"
ORIGIN      
        1 mrklylvdgt grerslqsdi efmwepsglg faenreyaqv eygffiessk dfeqpeisgt
       61 lvfwsktqep yqtyhefvdw vqgaqdlqlk yvpypgrely mdvnldgler tektlygple
      121 cpvtftgtsp yhkknpltfl fktdsttnpm rftfkfpfkf sdsgagdaqv ftpqghfpaa
      181 melyingpas niyykvednt tgeligafdl sgvsvaagdh iyyssrpnad gvwkvsgntr
      241 tdlveslnen vanfftlpvg revratltad tpptygkitr iggnsvqeag enmpspehps
      301 eiesvgdggv iditvngska vsipidqplr alrdadgnit aqdhvdada
//
LOCUS       WP_258108856             774 aa            linear   BCT 02-MAR-2025
DEFINITION  PEP-utilizing enzyme [Campylobacter lari].
ACCESSION   WP_258108856
VERSION     WP_258108856.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter lari
  ORGANISM  Campylobacter lari
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (residues 1 to 774)
  AUTHORS   Herzberg,O., Chen,C.C., Kapadia,G., McGuire,M., Carroll,L.J.,
            Noh,S.J. and Dunaway-Mariano,D.
  TITLE     Swiveling-domain mechanism for enzymatic phosphotransfer between
            remote reaction sites
  JOURNAL   Proc Natl Acad Sci U S A 93 (7), 2652-2657 (1996)
   PUBMED   8610096
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012609.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00391.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Campylobacter lari"
                     /db_xref="taxon:201"
     Protein         1..774
                     /product="PEP-utilizing enzyme"
                     /GO_function="GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA]"
                     /GO_process="GO:0016310 - phosphorylation [Evidence IEA]"
                     /calculated_mol_wt=89188
     Region          1..774
                     /region_name="PRK05849"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:235623"
ORIGIN      
        1 mdrlvfqtka rnlqnlknil knakvldvvi aslkeitqdr eevfkkitnl nakkliirss
       61 snsedslkss nagaflslan vdisnkgqlf nalekvghsm psendeiliq pmlldikkcg
      121 vafsvdkdnf apyfcieyde ngsnssitdg saknaktyfh yrenedikdp ymqkvilllk
      181 eleslygcnf ldvefafneq nelfclqvrp limqektnlf nslskealhr lykrflslqk
      241 prsrvlgdka ifgvmpdwnp aeiiglrpkr lafslykeii tdniwayqrd nygyrdlrsh
      301 plihsflgip yvdvrlsfns fipktldeni akrlvnyyld klyenhelhd kvefdivfsc
      361 ydfhmadkle rlldhsfnkn eikriefsll nltnsivnik nglclkdiek skqmivyyen
      421 imhsdfspld kiywlleeck rygtlpfagv araafvamtm lnslveigff skeekdefln
      481 slhtvsktls nelatlnenn kqdfikqfgh lragtynils prydedfdgy fdlkqkseik
      541 kekefkiddd kllkldqilk ehgievnake ffsflkiaie grefvkfefs kllskaisli
      601 edlgnyyeis kedmahldik silnlyssvy skspkdkfls einenkqeye lslaiklpal
      661 ltdahqifgf fanyihpnfi tqksisania leneqdlkgk ivliyaadpg ydylftkdia
      721 gfitcyggan shmairasel ampavigvge enfkkylqak kikidcqseq ifcl
//
LOCUS       WP_258109021             406 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Campylobacter lari].
ACCESSION   WP_258109021
VERSION     WP_258109021.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter lari
  ORGANISM  Campylobacter lari
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Campylobacter lari"
                     /db_xref="taxon:201"
     Protein         1..406
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45834
     Region          11..372
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(18..19,22..23,26,64,122..123,125..127,130,150,
                     153..154,157,241,244..245,248..250,279,283,332..333,336,
                     354,357..358,361..362,365)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mqkafkntiy aslggilefy dfvlfiffas vfakiffpqn ddfwpliyty vafgagylar
       61 pfgavvlahf adikgrknvf yvsmllmvvp sfvlaflpty enigllatfm lfiiriaqgl
      121 aigaevsgaw ifvsefvskk rlglalgfis atltlglllg nlatlsiyay fdkeevesfa
      181 wripffiggf fgilalflrt klnetpafkn ikekekilnf pllqalkthk ksmlicallt
      241 vvltsgvatl milpqyfesl lgvskttalt yqnlaivmii lgslvqgcla dflgyfkicl
      301 iftllfgifg mafsfynewf llfyllacfa qgiiafapif mtqifttelr ssglsfayni
      361 syailgfltp fivnfmheky fyfyiffvfi tslismflvk kyikil
//
LOCUS       WP_258109196             369 aa            linear   BCT 02-MAR-2025
DEFINITION  BclA C-terminal domain-containing protein [Bacillus paranthracis].
ACCESSION   WP_258109196
VERSION     WP_258109196.1
KEYWORDS    RefSeq.
SOURCE      Bacillus paranthracis
  ORGANISM  Bacillus paranthracis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 369)
  AUTHORS   Kirchdoerfer,R.N., Herrin,B.R., Han,B.W., Turnbough,C.L. Jr.,
            Cooper,M.D. and Wilson,I.A.
  TITLE     Variable lymphocyte receptor recognition of the immunodominant
            glycoprotein of Bacillus anthracis spores
  JOURNAL   Structure 20 (3), 479-486 (2012)
   PUBMED   22405006
REFERENCE   2  (residues 1 to 369)
  AUTHORS   Liu,C.Q., Nuttall,S.D., Tran,H., Wilkins,M., Streltsov,V.A. and
            Alderton,M.R.
  TITLE     Construction, crystal structure and application of a recombinant
            protein that lacks the collagen-like region of BclA from Bacillus
            anthracis spores
  JOURNAL   Biotechnol Bioeng 99 (4), 774-782 (2008)
   PUBMED   17879302
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18573.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Bacillus paranthracis"
                     /db_xref="taxon:2026186"
     Protein         1..369
                     /product="BclA C-terminal domain-containing protein"
                     /calculated_mol_wt=33456
     Region          <37..>116
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          241..369
                     /region_name="BclA_C"
                     /note="BclA C-terminal domain; pfam18573"
                     /db_xref="CDD:436587"
ORIGIN      
        1 msswrnning ycscnnqngv hvdsccfscd gtvpklgptg ptgatgptga tgatgptgvt
       61 gstgatgitg atgptgatga tgptgvtgit gvtgatgptg vtgitgvtgp tgvtgptgat
      121 gatgatgatg itgitgitga tgatgatgit gatgitgatg atgitgitgi tgatgatgat
      181 gitgatgitg atgatgptga tgatgatgpt gaagitgatg ptgstgatga tgtsitatya
      241 fanntsgtai svllggtnvp lpsnqnigpg itvsggntvf tvanagnyyi sytinitasl
      301 lvssriting aplagtinsp alattsfsat iittlaagda islqlfglla vatlstttpg
      361 avltiirls
//
LOCUS       WP_258109252             234 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Bacillus paranthracis].
ACCESSION   WP_258109252
VERSION     WP_258109252.1
KEYWORDS    RefSeq.
SOURCE      Bacillus paranthracis
  ORGANISM  Bacillus paranthracis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 234)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 234)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Bacillus paranthracis"
                     /db_xref="taxon:2026186"
     Protein         1..234
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=26041
     Region          3..234
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(7,9..10,12,31..33,81..83,132..134,156,160,186..189)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187586"
     Site            order(106,134,156,160)
                     /site_type="active"
                     /db_xref="CDD:187586"
ORIGIN      
        1 mrvlitggnr glglqlvkvf henghivypl vrtevaltql kkmfscrcfp iladlsades
       61 teqikkqlee yteyihlvin nagitgkete vlhtnseelt dlfnihclgv iravkgtyva
      121 laksdhprii nvssrlgslh kmankefpqg hfsysyriak aaqnmltlcl qqefedkgir
      181 vtaihpgklk teigafdanm tpaegakniy dwiidsnedv sgkfiepgvg elkw
//
LOCUS       WP_258109293             575 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase large subunit domain-containing protein [Klebsiella
            quasipneumoniae].
ACCESSION   WP_258109293
VERSION     WP_258109293.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 575)
  AUTHORS   Baumann,R.G. and Black,L.W.
  TITLE     Isolation and characterization of T4 bacteriophage gp17 terminase,
            a large subunit multimer with enhanced ATPase activity
  JOURNAL   J Biol Chem 278 (7), 4618-4627 (2003)
   PUBMED   12466275
REFERENCE   2  (residues 1 to 575)
  AUTHORS   Lang,A.S., Taylor,T.A. and Beatty,J.T.
  TITLE     Evolutionary implications of phylogenetic analyses of the gene
            transfer agent (GTA) of Rhodobacter capsulatus
  JOURNAL   J Mol Evol 55 (5), 534-543 (2002)
   PUBMED   12399927
REFERENCE   3  (residues 1 to 575)
  AUTHORS   Mitchell,M.S., Matsuzaki,S., Imai,S. and Rao,V.B.
  TITLE     Sequence analysis of bacteriophage T4 DNA packaging/terminase genes
            16 and 17 reveals a common ATPase center in the large subunit of
            viral terminases
  JOURNAL   Nucleic Acids Res 30 (18), 4009-4021 (2002)
   PUBMED   12235385
REFERENCE   4  (residues 1 to 575)
  AUTHORS   Lang,A.S. and Beatty,J.T.
  TITLE     The gene transfer agent of Rhodobacter capsulatus and 'constitutive
            transduction' in prokaryotes
  JOURNAL   Arch Microbiol 175 (4), 241-249 (2001)
   PUBMED   11382219
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015211.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03237.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..575
                     /product="terminase large subunit domain-containing
                     protein"
                     /calculated_mol_wt=65339
     Region          7..575
                     /region_name="P"
                     /note="terminase ATPase subunit; Provisional; PHA02535"
                     /db_xref="CDD:222859"
ORIGIN      
        1 miqdafirlr akqlywqgyp paeisrlmgi nsntvyswkk rdawddttpi krvtqsidtr
       61 lcqlsakdnk tsgdfkeidl ltrqlkrldt gqtttttgvk ktsrrkkknh fseeqidalr
      121 skildslawh qrgwyeqrdq rnrmilksrq igatwyfare allgalrtdv khdyqrnqif
      181 lsasrkqalq frnfirkaae evdvelkgge qitlsngael hflgtsaata qsytghlrfd
      241 effwtgnfin lrkvagamat lkgltrtyfs tpssesheay qfwtgdrwna krpkaqrvdf
      301 dvswkkthsg vlypdktwrq ivtiqdainn gwdytdidei rdenspdefe nlymcefvkd
      361 gesafnlsql lgcgadgydd wpdwkpfasr pmgqrevwlg yddnggsgng dagalsvtvp
      421 plvaggrfrt velkqlrgle feqqaavike aaerynvthi aidgqgvgea vwqivknwfp
      481 aaicyqmsls skralvlkml qviragrwey drseqglvra fnavrkvvtp ggfityetdr
      541 srgvshgdma watmlsiine plgqesgggg famgw
//
LOCUS       WP_258109438              83 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4652 domain-containing protein [Bacillus paranthracis].
ACCESSION   WP_258109438
VERSION     WP_258109438.1
KEYWORDS    RefSeq.
SOURCE      Bacillus paranthracis
  ORGANISM  Bacillus paranthracis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15525.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Bacillus paranthracis"
                     /db_xref="taxon:2026186"
     Protein         1..83
                     /product="DUF4652 domain-containing protein"
                     /calculated_mol_wt=9350
ORIGIN      
        1 msnnilaiii gfgygtiavg gdvylfnldn qekinltnne wdirivdiqy kdngiltkgi
       61 kytgldfigf eefikeievn kyl
//
LOCUS       WP_258109331             289 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Klebsiella
            quasipneumoniae].
ACCESSION   WP_258109331
VERSION     WP_258109331.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 289)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..289
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=33027
     Region          1..287
                     /region_name="PRK10086"
                     /note="DNA-binding transcriptional regulator DsdC"
                     /db_xref="CDD:182231"
ORIGIN      
        1 mqtfevtarh lsftlaahem nltqgavshr irklemhigf rlfirmtrkl alteegkrll
       61 ttlshslrai ndeiedireq dlrgtlhigi aptlahlwlm prlprfqaqw pglnlqfrvr
      121 agvmdfneer vdlaiyygat rypdlyqqrl maesllpvcs peyrrqyrpl sggdaaaivw
      181 ihacestdvq dqfaewrlwc qqsgqalpfd gryyavnnhs laiemalngl gvvmgrktli
      241 qpllatgrlv alsedeaesp fgydlicpqe nrsrprfraf skwlaaecv
//
LOCUS       WP_258109500             226 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: zonular occludens toxin domain-containing protein
            [Bacillus cereus group].
ACCESSION   WP_258109500
VERSION     WP_258109500.1
KEYWORDS    RefSeq.
SOURCE      Bacillus cereus group
  ORGANISM  Bacillus cereus group
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 226)
  AUTHORS   Karyekar,C.S., Fasano,A., Raje,S., Lu,R., Dowling,T.C. and
            Eddington,N.D.
  TITLE     Zonula occludens toxin increases the permeability of molecular
            weight markers and chemotherapeutic agents across the bovine brain
            microvessel endothelial cells
  JOURNAL   J Pharm Sci 92 (2), 414-423 (2003)
   PUBMED   12532391
REFERENCE   2  (residues 1 to 226)
  AUTHORS   Rossi,M., Maurano,F., Luongo,D., Fasano,A., Uzzau,S., Auricchio,S.
            and Troncone,R.
  TITLE     Zonula occludens toxin (Zot) interferes with the induction of nasal
            tolerance to gliadin
  JOURNAL   Immunol Lett 81 (3), 217-221 (2002)
   PUBMED   11947928
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017518.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05707.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Bacillus cereus group"
                     /db_xref="taxon:86661"
     Protein         1..226
                     /product="zonular occludens toxin domain-containing
                     protein"
                     /calculated_mol_wt=26327
ORIGIN      
        1 mafhifiqap lrqgktllms llahywkmkv eemggeiqlf snyqlldskp mdhytdwyev
       61 aeaqgsiccw deahmafsnr kwskhgqsia tevmiytgkm rsvqiycspn isnvdsrirq
      121 ivevlvdvrk tpkgfhirft dyqegtllnk aflpmsrakk ifdlelydth qmvkgfplps
      181 tekasdeffe klemihdrar gkekrkkket ttialekvfd kekmti
//
LOCUS       WP_258109555             109 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase, partial [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258109555
VERSION     WP_258109555.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 109)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 109)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..>109
                     /product="MBL fold metallo-hydrolase"
     Region          3..>104
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
ORIGIN      
        1 mnitvlggae igatclwfrt astewlvdag trmderdplp alslleegha npqaifitha
       61 hqdhlgalpl issmypnapv ymtqptldia rvmladalhl sqlegharv
//
LOCUS       WP_258109575             250 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaD domain protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258109575
VERSION     WP_258109575.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 250)
  AUTHORS   Marbouty,M., Saguez,C. and Chauvat,F.
  TITLE     The cyanobacterial cell division factor Ftn6 contains an N-terminal
            DnaD-like domain
  JOURNAL   BMC Struct Biol 9, 54 (2009)
   PUBMED   19698108
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 250)
  AUTHORS   Bruand,C., Farache,M., McGovern,S., Ehrlich,S.D. and Polard,P.
  TITLE     DnaB, DnaD and DnaI proteins are components of the Bacillus
            subtilis replication restart primosome
  JOURNAL   Mol Microbiol 42 (1), 245-255 (2001)
   PUBMED   11679082
REFERENCE   3  (residues 1 to 250)
  AUTHORS   Hoshino,T., McKenzie,T., Schmidt,S., Tanaka,T. and Sueoka,N.
  TITLE     Nucleotide sequence of Bacillus subtilis dnaB: a gene essential for
            DNA replication initiation and membrane attachment
  JOURNAL   Proc Natl Acad Sci U S A 84 (3), 653-657 (1987)
   PUBMED   3027697
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018914.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07261.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..250
                     /product="DnaD domain protein"
                     /calculated_mol_wt=29196
     Region          34..86
                     /region_name="HTH_36"
                     /note="Helix-turn-helix domain; pfam13730"
                     /db_xref="CDD:463970"
     Region          129..>207
                     /region_name="DnaD"
                     /note="DNA replication protein DnaD [Replication,
                     recombination and repair]; COG3935"
                     /db_xref="CDD:443136"
ORIGIN      
        1 mrpfvpspdd idflgrafvs vpldlleryg ewdmepqafi lllsilsasq legstdlstv
       61 rlaerckmss ndvlryleql vqggflsige rldtegthst yfdlrplwrr irqkdagksp
      121 yqdwrrdpvt lfeeefgrpl sgleldqirq wleedrvpew mivealreav yankfafkyi
      181 drvlfdwqkn hirtkqeldd yrerfrttnk sqtssksqsg kadasgypqk arptnkddry
      241 safyelfpda
//
LOCUS       WP_258109653             322 aa            linear   BCT 02-MAR-2025
DEFINITION  polyprenyl synthetase family protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258109653
VERSION     WP_258109653.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012568.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00348.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..322
                     /product="polyprenyl synthetase family protein"
                     /GO_process="GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=35791
     Region          6..322
                     /region_name="Isoprenoid_Biosyn_C1"
                     /note="Isoprenoid Biosynthesis enzymes, Class 1; cl00210"
                     /db_xref="CDD:469660"
     Site            order(77,80..82,84..86,88..89,94..95,147,150,171..172,175,
                     212..213,216,226,231,236)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:173833"
     Site            80..89
                     /site_type="active"
                     /note="chain length determination region [active]"
                     /db_xref="CDD:173833"
     Site            order(85..86,89,94..95,150,171,212..213,216,226,231,236)
                     /site_type="active"
                     /note="substrate-Mg2+ binding site [active]"
                     /db_xref="CDD:173833"
     Site            order(85..86,89,94..95,171,212..213)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:173833"
     Site            order(85..86,89,94..95,150,171)
                     /site_type="other"
                     /note="aspartate-rich region 1"
                     /db_xref="CDD:173833"
     Site            order(91..105,219..220,226..231,234..238)
                     /site_type="active"
                     /note="active site lid residues [active]"
                     /db_xref="CDD:173833"
     Site            order(212..213,216,226,231,236)
                     /site_type="other"
                     /note="aspartate-rich region 2"
                     /db_xref="CDD:173833"
ORIGIN      
        1 msfvqvynry esrlhsvelr lrgevhseqa tlsraalhll eaggkrirpl favicgslgq
       61 rentedverv acalelihma tlvhddvidd sslrrgqptv kaqfgnraam yvgdflfara
      121 igilsrierv dihqefstai akmcrgeieq irdlfnwtqt lrtyfrrier ktallisvsc
      181 slgasaagas aqnvsalrrf gywtgmafqi iddvldfsgd eshvgkpvag dlrqgnltlp
      241 tllasldvpv geqlrrlvqk dmtseqatla iqivrdsgci esargiakkc makavqhlqc
      301 idipevrvel qtvadfvyer lf
//
LOCUS       WP_258109697             732 aa            linear   BCT 02-MAR-2025
DEFINITION  penicillin-binding transpeptidase domain-containing protein
            [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258109697
VERSION     WP_258109697.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 732)
  AUTHORS   Pares,S., Mouz,N., Petillot,Y., Hakenbeck,R. and Dideberg,O.
  TITLE     X-ray structure of Streptococcus pneumoniae PBP2x, a primary
            penicillin target enzyme
  JOURNAL   Nat Struct Biol 3 (3), 284-289 (1996)
   PUBMED   8605631
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00905.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..732
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /GO_function="GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /calculated_mol_wt=79775
     Region          15..585
                     /region_name="FtsI"
                     /note="Cell division protein FtsI, peptidoglycan
                     transpeptidase (Penicillin-binding protein 2) [Cell cycle
                     control, cell division, chromosome partitioning, Cell
                     wall/membrane/envelope biogenesis]; COG0768"
                     /db_xref="CDD:440531"
     Region          613..658
                     /region_name="PASTA"
                     /note="PASTA domain. This domain is found at the C-termini
                     of several Penicillin-binding proteins (PBPs) and
                     bacterial serine/threonine kinases. It is a small globular
                     fold consisting of 3 beta-sheets and an alpha-helix. The
                     name PASTA is derived from PBP and...; cl02768"
                     /db_xref="CDD:470670"
     Region          673..726
                     /region_name="PASTA_Pbp2x-like_2"
                     /note="PASTA domain of PBP2x-like proteins, second repeat.
                     Penicillin-binding proteins (PBPs) are the major targets
                     for beta-lactam antibiotics, like penicillins and
                     cephalosporins. Beta-lactam antibiotics specifically
                     inhibit transpeptidase activity by...; cd06575"
                     /db_xref="CDD:119326"
     Region          673..725
                     /region_name="PASTA domain"
                     /note="PASTA domain [structural motif]"
                     /db_xref="CDD:275384"
ORIGIN      
        1 mkrktptrsq stqaknrpsr hkkrvlliqa vgigtlclvg wrildiqttl gpsllkaaak
       61 iqdvhktila prgsilddtg hpvaydvpay vmdikvsnfr nrealaqnls aamklpvssi
      121 aglvdendkw iqwprpvlat vkealqkdyq ntphindftf ttteervypf grfaaatigy
      181 vgpngqgvmg vessynkvle gtpgiltykq dasgfplpgt mktiqaakpg dsveltinpt
      241 iqgfvdeemn kldnqvhpah aalivmdpyn gailamssrp nfnpnhywta ppaaldqnwa
      301 vsasfepgst fklvvlsaal avhainlnqk ymsgqitidg rtihdwnywg wgrityrkal
      361 eyssnvgfar iamatgwhnl mhylrlfgmt kptgidlpde atsilfpksd ehakqgelel
      421 attgfgqgia vtplqlvdst saianggtly rpyvvkails pdgkviqrir phirrahfis
      481 psilktirqt mvldvsqgid naayikgydv agktgtaqvv npktgkfyss rfltsfigfa
      541 pewdpkvvvy cyvdwpklpv ndtwgsttat piaravlkdi meyyhiaphg svaqkeeaal
      601 mkpptptsyv eslpslvgds lstldywaks tganviqngt gqtvvrqwpa pgdslstnmp
      661 vyvwmsqpak tvkmpnlkgl tmgqvlslle ayqltpalhg sgfvatqsvp agsvvhsget
      721 vsvtlkpplq ep
//
LOCUS       WP_258109870             488 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258109870
VERSION     WP_258109870.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017416.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05598.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..488
                     /product="transposase"
                     /calculated_mol_wt=55667
     Region          2..394
                     /region_name="transpos_IS1182"
                     /note="IS1182 family transposase; NF033551"
                     /db_xref="CDD:468080"
ORIGIN      
        1 mdlqlellpy hyystlgfda elidyidhvd dsivlekiap lyknggrppv dprtcfrmhy
       61 lyftrpeiss frelerqlke pknqawrnfi gvpsiekvpv hsslshfrtk vsaelfyail
      121 fdliaqalkl kdflqpmltg idsrpvwanv ngykhkrcdc pdrsrcdcek tytdpdatcg
      181 vqrtkanqnk ffigyrkhsi vcpspkgpiv lfsillpndt tdvkvmlpli dmmkkieglk
      241 vdyvvadlgy ldakdqkeal lshdvavvtg ikkntvipeh cspkgkpgce qghalvfdgf
      301 drdthtawfr gdpvlcaacp lqglcdkqfg ysfkenplfh gpvpqdsmlq eqimkfrkqv
      361 elafaqesnq ltsvmkhkkv pvreikrvek wfilrdafrl vgrmiqhira tvlpqdhvvn
      421 ikknegqisf heplspicqv rvitkrnvtg nhslplaygg lnileqfcsn pwdiaqkhlf
      481 ivcrccvv
//
LOCUS       WP_258109772             325 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258109772
VERSION     WP_258109772.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 325)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 325)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..325
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=35580
     Region          1..311
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     Site            order(19..21,48,53,78,119,149..150,175,203..209,261,
                     278..281,286,289..290)
                     /site_type="active"
                     /db_xref="CDD:381296"
     Site            order(48,53,78,119)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381296"
ORIGIN      
        1 mkyrrlgrsg levsvlglgt nafggradke tsiqivhral dvglnfidta nvytgtqset
       61 ilgealvgrr heavlatkgs mprgagpnqr gssrahltre legslqrlrt dyvdlyqihs
      121 fdphtpldet lrtlddfics gkvryigasn yaawelmksl sisernhwnr fvsvqpgysl
      181 adrwvehelm pmcvsegvgi ipyfplaggi ltgkyaggke tvpsgsraek dpnfanrldp
      241 arlklgenva alaashgwtt talslawlmh qpavttvivg atrtsqledn laaaeldlsp
      301 evlrelhems reflysppfa tfrls
//
LOCUS       WP_258109950             459 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein [Alicyclobacillus sp.
            SP_1].
ACCESSION   WP_258109950
VERSION     WP_258109950.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 459)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..459
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=53186
     Region          2..>351
                     /region_name="UvrD"
                     /note="Superfamily I DNA or RNA helicase [Replication,
                     recombination and repair]; COG0210"
                     /db_xref="CDD:439980"
     Region          <345..423
                     /region_name="UvrD_C"
                     /note="UvrD-like helicase C-terminal domain; pfam13361"
                     /db_xref="CDD:433145"
ORIGIN      
        1 mwteeqlrvl eepirdmvvf agpgsgkttv lteymarqlv trdiepehim sltftrksat
       61 qlgkrlleqh pelgtqldkl hlgtfhsqlf hsllrkmpdi pvllksseqy qlakqavsea
      121 fsenstgprv iqnflaevtr lkstfpvavd dspyvrafhr yeqlkvaekr wdfddivlef
      181 lrileshglp lefqnvrlml vdefqdtnal qwriferirs nssarmyvvg dddqsiysfr
      241 gassewlvnf esyvplatrh ylqtnfrsar ticevastli qynvdrapkt mrpvrletgv
      301 aqairvrdea deietirflv eyylrgtets iavlartrqq llpilqiylr htsfrkaydg
      361 rvhslefrtf heakgqewdv viilgavans pylrdrstes tesseerrlf fvactrarvc
      421 lyilvpkfyk tlcvrslcfl seskieftrk sqlssnlrg
//
LOCUS       WP_258109889             269 aa            linear   BCT 02-MAR-2025
DEFINITION  pyrroline-5-carboxylate reductase dimerization domain-containing
            protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258109889
VERSION     WP_258109889.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 269)
  AUTHORS   Nocek,B., Chang,C., Li,H., Lezondra,L., Holzle,D., Collart,F. and
            Joachimiak,A.
  TITLE     Crystal structures of delta1-pyrroline-5-carboxylate reductase from
            human pathogens Neisseria meningitides and Streptococcus pyogenes
  JOURNAL   J Mol Biol 354 (1), 91-106 (2005)
   PUBMED   16233902
  REMARK    Erratum:[J Mol Biol. 2006 Mar 31;357(3):1050]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14748.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..269
                     /product="pyrroline-5-carboxylate reductase dimerization
                     domain-containing protein"
                     /calculated_mol_wt=28802
     Region          1..250
                     /region_name="PRK07680"
                     /note="late competence protein ComER; Validated"
                     /db_xref="CDD:181080"
ORIGIN      
        1 mnigivgtgn mggmlakafa evpdhqvfvy nrhpekslhl aqscpsisvl psaeavaqsa
       61 evlflctrhd dtvevmatll phlsahqwvg ttcssiplhe wsdespatff kcipsltqtv
      121 rsgsilftme pdapasescr lanilggigm pvriredqlr iysdltscgp aflsqvllrw
      181 aeaagdtrhi tpkvaedmlv rtligtarll eagmslediv ghiavpggvt arglesigda
      241 slqlfrrlhe ttmahqqkaa tlsvsepna
//
LOCUS       WP_258109951             230 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258109951
VERSION     WP_258109951.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 230)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..230
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=26178
     Region          1..228
                     /region_name="DR1119"
                     /note="Predicted phosphohydrolase, DR1119 family,
                     metallophosphatase superfamily [General function
                     prediction only]; COG1768"
                     /db_xref="CDD:441374"
ORIGIN      
        1 mryfaiadlh lsfsnpkpmn lfgelwdnhe lkikhtwtdm vreedvvfia gdiswamtls
       61 damrdiewia qlpgqkviir gnhdywwsgi skmrsllppg vhalqndaig fgdvvvcgsr
      121 gwqlpshpsf tgederlysr elerlrlslv yadslphktk vvllhyppls adgnetamtr
      181 lleqygvslc vyghlhahah rhayvgrlhg iqyqlvsady vnfhpmllpi
//
LOCUS       WP_258109964             196 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleoside recognition domain-containing protein [Alicyclobacillus
            sp. SP_1].
ACCESSION   WP_258109964
VERSION     WP_258109964.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 196)
  AUTHORS   Hantke,K.
  TITLE     Is the bacterial ferrous iron transporter FeoB a living fossil?
  JOURNAL   Trends Microbiol 11 (5), 192-195 (2003)
   PUBMED   12781516
REFERENCE   2  (residues 1 to 196)
  AUTHORS   Loewen,S.K., Ng,A.M., Yao,S.Y., Cass,C.E., Baldwin,S.A. and
            Young,J.D.
  TITLE     Identification of amino acid residues responsible for the
            pyrimidine and purine nucleoside specificities of human
            concentrative Na(+) nucleoside cotransporters hCNT1 and hCNT2
  JOURNAL   J Biol Chem 274 (35), 24475-24484 (1999)
   PUBMED   10455109
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019292.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07670.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..196
                     /product="nucleoside recognition domain-containing
                     protein"
                     /calculated_mol_wt=20632
     Region          1..195
                     /region_name="SpmA"
                     /note="Spore maturation protein SpmA (function unknown)
                     [General function prediction only]; COG2715"
                     /db_xref="CDD:442028"
ORIGIN      
        1 midliwlllf vtgiatalft grmpqvsegi lsgaatgvel ciglisvivl wmglmniaek
       61 sgaisllsrv lrpvarrlfp svpvdhpamg ailanmsani lgignaatpl glramkelqt
      121 lnpnkdvasd amctflavnt asitlipttv iavrmqmhsa hptsvigpti lataigtvaa
      181 lcfdrlfraf skrrrv
//
LOCUS       WP_258110000             363 aa            linear   BCT 02-MAR-2025
DEFINITION  Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing
            protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258110000
VERSION     WP_258110000.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 363)
  AUTHORS   Baker,P.J., Turnbull,A.P., Sedelnikova,S.E., Stillman,T.J. and
            Rice,D.W.
  TITLE     A role for quaternary structure in the substrate specificity of
            leucine dehydrogenase
  JOURNAL   Structure 3 (7), 693-705 (1995)
   PUBMED   8591046
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014827.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02812.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..363
                     /product="Glu/Leu/Phe/Val dehydrogenase dimerization
                     domain-containing protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=38858
     Region          3..343
                     /region_name="Trp_DH_ScyB"
                     /note="tryptophan dehydrogenase ScyB; NF035922"
                     /db_xref="CDD:411511"
ORIGIN      
        1 melfdylsey dyeqviychd kasglkaiia ihdttlgpal ggcrmwpyas eeealldalr
       61 lsrgmtykaa aaglnlgggk tvvigdakkd ksealfrslg ryiqslggry itaedvgttv
      121 sdmdmihtet tfvtgvskay gsggnpspmt afgvfrgmqa takvalgsdd lsgktvaiqg
      181 lgsvgyalaq qihdaggklv vtdinpdavm rakeefgaea vgiqeifdvr cdilapcalg
      241 avlndqtlpk lkckaiagsa nnqlgearhg dwlhshgily apdyvinsgg linvadeleg
      301 yqadramkkv dniynimlel yavseresip syaaadhmae eriqlmqqvr stfvqgsrtv
      361 lqk
//
LOCUS       WP_258110001             685 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma 54-interacting transcriptional regulator [Alicyclobacillus
            sp. SP_1].
ACCESSION   WP_258110001
VERSION     WP_258110001.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 685)
  AUTHORS   Studholme,D.J. and Dixon,R.
  TITLE     Domain architectures of sigma54-dependent transcriptional
            activators
  JOURNAL   J Bacteriol 185 (6), 1757-1767 (2003)
   PUBMED   12618438
REFERENCE   2  (residues 1 to 685)
  AUTHORS   Chaney,M., Grande,R., Wigneshweraraj,S.R., Cannon,W., Casaz,P.,
            Gallegos,M.T., Schumacher,J., Jones,S., Elderkin,S., Dago,A.E.,
            Morett,E. and Buck,M.
  TITLE     Binding of transcriptional activators to sigma 54 in the presence
            of the transition state analog ADP-aluminum fluoride: insights into
            activator mechanochemical action
  JOURNAL   Genes Dev 15 (17), 2282-2294 (2001)
   PUBMED   11544185
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00158.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..685
                     /product="sigma 54-interacting transcriptional regulator"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008134 - transcription factor binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=74635
     Region          113..>244
                     /region_name="NtrB"
                     /note="Signal transduction histidine kinase NtrB, nitrogen
                     specific [Signal transduction mechanisms]; COG3852"
                     /db_xref="CDD:443061"
     Region          227..680
                     /region_name="RocR"
                     /note="RocR-type transcriptional regulator, contains PAS,
                     AAA-type ATPase, and DNA-binding Fis domains
                     [Transcription, Signal transduction mechanisms]; COG3829"
                     /db_xref="CDD:443041"
ORIGIN      
        1 mnliligagk ggakvlhtla dyrevsiacv vdidgsapgi avakekgipv andidaalqv
       61 vrsqidvile vtgdtavyms llrrfpvepi vvpasalkff lllmgekerl igaartrqrd
      121 lqrildathd gmigidlgtr vtfcnaaasr llgtpeheir grkstnwipd etvrpvlsgh
      181 dgrvlqmtsd tgtdlvvhcl piddengsri gamvvlrdvt evrrlaeevt nlrelqqwle
      241 aviqstqdai svvdkngmgl linpaytrlt glspeevigh paevdiaege smhlqvlrtg
      301 kpvksvplkv glqrrevivd vapiwvegel rgavgvihdi seiarlnael nkanrllrsl
      361 sarysfadiv ggsqsmvvai eqakraaatp atvllrgesg tgkelfahai hqesdragkp
      421 flrvncaslg egllevelfg qepstwemsa qkrvglmeda sggtlfldei gelslatqak
      481 llraiqerei vrvggsrpvp vdvrficath vnleqavarg tfredlyyrl nvipifippl
      541 ryrkedlaql aiaivsrhnq tygrnvtevd pdaiaalsrw dwpgnvrele nvlgrammav
      601 gyaetklrah hlpplgfpnl eqtttaealp smlplhgtla drmksiekll iqqtlsetgg
      661 nktetarrlg isvrslyykm gsdgp
//
LOCUS       WP_258110127             334 aa            linear   BCT 02-MAR-2025
DEFINITION  RodZ domain-containing protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258110127
VERSION     WP_258110127.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 334)
  AUTHORS   Alyahya,S.A., Alexander,R., Costa,T., Henriques,A.O., Emonet,T. and
            Jacobs-Wagner,C.
  TITLE     RodZ, a component of the bacterial core morphogenic apparatus
  JOURNAL   Proc Natl Acad Sci U S A 106 (4), 1239-1244 (2009)
   PUBMED   19164570
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024855.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13464.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..334
                     /product="RodZ domain-containing protein"
                     /calculated_mol_wt=35219
     Region          8..73
                     /region_name="RodZ"
                     /note="Cytoskeletal protein RodZ, contains Xre-like HTH
                     and DUF4115 domains [Cell cycle control, cell division,
                     chromosome partitioning]; COG1426"
                     /db_xref="CDD:441035"
     Region          9..272
                     /region_name="PRK10856"
                     /note="cytoskeleton protein RodZ"
                     /db_xref="CDD:236776"
     Region          266..318
                     /region_name="DUF4115"
                     /note="Domain of unknown function (DUF4115); pfam13464"
                     /db_xref="CDD:433229"
ORIGIN      
        1 mnslvrdlgq rlkdtresqg lsldevadrt kirthylkal engewdflpg dvyargfvrs
       61 yadvlgmdgq allaeldaqv armkrveqsa vlepqkksge drglaredgk seqksagsds
      121 qqqrnqsgks gqrdgkpsrr llawngtsqa avvivglali aagayvlnhg hgmkkapgtg
      181 avtatvppst svtgtatppt splttsstqs sspkppktst aaktytsass nfsvtplafq
      241 ngqmtyrvss pqtmlvtvta tsangcwlev qddgtvvnps lllasgtsrs wtsshsmlir
      301 vgnvpgasvk vdghaltlpd vkvpinvlie rqss
//
LOCUS       WP_258110173             377 aa            linear   BCT 02-MAR-2025
DEFINITION  redoxin domain-containing protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258110173
VERSION     WP_258110173.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 377)
  AUTHORS   Chae,H.Z., Robison,K., Poole,L.B., Church,G., Storz,G. and
            Rhee,S.G.
  TITLE     Cloning and sequencing of thiol-specific antioxidant from mammalian
            brain: alkyl hydroperoxide reductase and thiol-specific antioxidant
            define a large family of antioxidant enzymes
  JOURNAL   Proc Natl Acad Sci U S A 91 (15), 7017-7021 (1994)
   PUBMED   8041738
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012787.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00578.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..377
                     /product="redoxin domain-containing protein"
                     /GO_function="GO:0016209 - antioxidant activity [Evidence
                     IEA]"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=40757
     Region          68..223
                     /region_name="Sco1"
                     /note="Cytochrome oxidase Cu insertion factor,
                     SCO1/SenC/PrrC family [Posttranslational modification,
                     protein turnover, chaperones]; COG1999"
                     /db_xref="CDD:441602"
     Region          262..377
                     /region_name="TrxA"
                     /note="Thiol-disulfide isomerase or thioredoxin
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG0526"
                     /db_xref="CDD:440292"
ORIGIN      
        1 mseskglkew slpvisvvlg igiiyglyht fsesapstva iapapagtas iamdagtkln
       61 nqpapafqlh nqlhqmvgps qwqgkvvllt fvnpddttat plllnemsha vkllnpsars
      121 qvvlaavtan ptqqanqvlm hyqtshqlqg nwemlsgpdq tlktvwrkyg vatsirtgev
      181 eespvvyvln ekgqetrkyt vapdyvtgqs qtdefaeslv qllpsaslks svavtpptag
      241 pppsklpvye ngrpmgelay qsgkpqidvf laswatglga emrtleklhq ndptlpirli
      301 dvlpvesslk hvatwdakkl pakwplfvdt kgevseayav nsvptvaiid eegdvawsrn
      361 sftpyktlqk airtqlg
//
LOCUS       WP_258110190             179 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-dependent oxidoreductase [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258110190
VERSION     WP_258110190.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 179)
  AUTHORS   van Der Ploeg,J.R., Iwanicka-Nowicka,R., Bykowski,T.,
            Hryniewicz,M.M. and Leisinger,T.
  TITLE     The Escherichia coli ssuEADCB gene cluster is required for the
            utilization of sulfur from aliphatic sulfonates and is regulated by
            the transcriptional activator Cbl
  JOURNAL   J Biol Chem 274 (41), 29358-29365 (1999)
   PUBMED   10506196
REFERENCE   2  (residues 1 to 179)
  AUTHORS   Kertesz,M.A., Schmidt-Larbig,K. and Wuest,T.
  TITLE     A novel reduced flavin mononucleotide-dependent methanesulfonate
            sulfonatase encoded by the sulfur-regulated msu operon of
            Pseudomonas aeruginosa
  JOURNAL   J Bacteriol 181 (5), 1464-1473 (1999)
   PUBMED   10049377
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015325.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03358.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..179
                     /product="NAD(P)H-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=18923
     Region          1..177
                     /region_name="FMN_red"
                     /note="NADPH-dependent FMN reductase; cl00438"
                     /db_xref="CDD:469770"
ORIGIN      
        1 mkvyivydse nghtemlaks vaegarnheg aevflhhvqd anprdlvamd aiiwgcpghf
       61 gtissglksw idqlgylwat gklvgkvgaa fcttatvhgg iemtlwnlit pmlhngmiiv
      121 glpgnvpenv lygsyygvgv tcpveldata plnmpsaehl algralgrrv advagklsv
//
LOCUS       WP_258110197             352 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Alicyclobacillus sp.
            SP_1].
ACCESSION   WP_258110197
VERSION     WP_258110197.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..352
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=38784
     Region          <2..332
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mkivdgpfrl vkavpyqswt lvpnknydgh kstlkkivfd yessnasefa glktgainvg
       61 yldlsqytar seltsmgdti tpeyafgysd tqlnmfpgak takifdhlyv rqamqmgide
      121 dainkdiyhg yapptygpip tvpatqfldp elskpiypyn pskglalmes hgwkmqngil
      181 vkgsekmkfv mlyvsgvqag qdeaelmkqd waaegisvtl kpmpistfit itsnpkqpns
      241 wqmatglgwd yngpgyyptg gelfgtgaps gfgysnseed kliaathqpy tsdtanlhaf
      301 wryenftaeh lpvlwnnnaa tlivnsanvh gvaknydgpd gnvdmqywsl ak
//
LOCUS       WP_258110245             300 aa            linear   BCT 02-MAR-2025
DEFINITION  P-loop NTPase [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258110245
VERSION     WP_258110245.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 300)
  AUTHORS   Hausmann,A., Aguilar Netz,D.J., Balk,J., Pierik,A.J., Muhlenhoff,U.
            and Lill,R.
  TITLE     The eukaryotic P loop NTPase Nbp35: an essential component of the
            cytosolic and nuclear iron-sulfur protein assembly machinery
  JOURNAL   Proc Natl Acad Sci U S A 102 (9), 3266-3271 (2005)
   PUBMED   15728363
REFERENCE   2  (residues 1 to 300)
  AUTHORS   Motallebi-Veshareh,M., Rouch,D.A. and Thomas,C.M.
  TITLE     A family of ATPases involved in active partitioning of diverse
            bacterial plasmids
  JOURNAL   Mol Microbiol 4 (9), 1455-1463 (1990)
   PUBMED   2149583
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022077.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10609.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..300
                     /product="P-loop NTPase"
                     /calculated_mol_wt=32616
     Region          27..255
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            order(37..42,64,142,196..197)
                     /site_type="active"
                     /db_xref="CDD:349758"
ORIGIN      
        1 mtdqaeslrr rmvevappal egefvprviv vasgkggvgk snfcvnfsls lsqqgyrpvv
       61 vdsdvgfanv ellldarpta tvldlcgtad vwdvvqyskh glpflsggss lssvnqldge
      121 gvqrlhsqlg rlgerfnvvv fdlgagigpq fstlvaeade mvvvttpept alsdayalik
      181 yvqenghrph wrlvinrarr lvdakdaaek lsatvrrfld ldvqvlgyvl ededvqkavm
      241 rqtpwvlshp nstatrcmeq ivqnylradr psrggwtrfl srllgrtgds ggdknsghsa
//
LOCUS       WP_258110261             199 aa            linear   BCT 02-MAR-2025
DEFINITION  magnesium transporter MgtE N-terminal domain-containing protein
            [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258110261
VERSION     WP_258110261.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 199)
  AUTHORS   Hattori,M., Tanaka,Y., Fukai,S., Ishitani,R. and Nureki,O.
  TITLE     Crystal structure of the MgtE Mg2+ transporter
  JOURNAL   Nature 448 (7157), 1072-1075 (2007)
   PUBMED   17700703
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015413.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03448.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..199
                     /product="magnesium transporter MgtE N-terminal
                     domain-containing protein"
                     /calculated_mol_wt=20751
     Region          74..178
                     /region_name="MotE"
                     /note="Flagellar motility protein MotE, a chaperone for
                     MotC folding [Cell motility]; COG3334"
                     /db_xref="CDD:442563"
ORIGIN      
        1 mantttvste rspslfkrll iwillavvgl laaagiigga leyvgvpvik tvtdwvmplp
       61 kkheangtas sqnalssqma vqvaenhsle nqlsldtqkl qalkaevkkl eaeqgvqvtd
      121 haaaeteani lvqmdpqkaa avlenmkfta aartiavmqa sdsgqiladv ppqlasklia
      181 aaaldekltv santnsats
//
LOCUS       WP_258110307            1385 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA domain-containing protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258110307
VERSION     WP_258110307.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024486.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13086.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1385
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..1385
                     /product="AAA domain-containing protein"
                     /GO_function="GO:0004386 - helicase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=159150
     Region          <89..153
                     /region_name="DUF4011"
                     /note="Protein of unknown function (DUF4011); pfam13195"
                     /db_xref="CDD:463806"
     Region          237..>340
                     /region_name="SSL2"
                     /note="Superfamily II DNA or RNA helicase [Transcription,
                     Replication, recombination, and repair]; COG1061"
                     /db_xref="CDD:440681"
     Region          292..>350
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Region          294..>457
                     /region_name="AAA_11"
                     /note="AAA domain; pfam13086"
                     /db_xref="CDD:404072"
     Site            314..320
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          <647..1246
                     /region_name="DNA2"
                     /note="Superfamily I DNA and/or RNA helicase [Replication,
                     recombination and repair]; COG1112"
                     /db_xref="CDD:440729"
     Region          1280..1373
                     /region_name="MTES_1575"
                     /note="REase_MTES_1575; pfam18741"
                     /db_xref="CDD:465853"
ORIGIN      
        1 mqdifelyrd rlidlskrnp slrllkltnk nhadmcsmef aeeghsiria qavveqkqei
       61 vlmtalgqsd eelllnrrlt tlrreldlie qetgantfhv aygflegtlv edfflrspil
      121 mypghllkkk irgvphwvid lesenppfln pvldlalnrf lgvnlgeamk qvgeevptyd
      181 vwswvdsifs aanmkvtrge eslapfqslt ksdiivesvp friqpfmifg kfrqstsnll
      241 vdyeallknp pthgllyrlf dkepideqls evktellnqq keeeaffvln tdasqeaavv
      301 asrgrdgliv hgppgtgksq vivnliadrl argqrvlvvc qkpvalevvy nrlaainlnh
      361 qvvlvhdvnr dkavvygkig silqrnipag vtaleriste mdtlanslnm iahslhverp
      421 fgktlqylyg hakwdqnlii dvsdlassmt ydelqkrlle irsitvmmqk fdnskhpwak
      481 rksfvsfgnq qhmqlegttk rlssavhqas eiwmqvelpy tpqfllqnki alvklksavq
      541 rlqrtnlheh vsmfyagggk sfeskeqigk vkqkhqtisp klnrmkestd svdhlsvlea
      601 kecakkiadf lgyqqkltrf vstswyglkk evqaycvkfg vqftskalqk qldsiksfll
      661 fqemredlae vhffsdvpmt nsieeweawa rrkqhaleil dkyveaqtcf kdwlpdlmtk
      721 edltrltdpr ftltvdrllq vislteqasi diedlnpyld gdaltelhem irqgifdakr
      781 fddlhqavrd fdslqrldqm kdeldgfnrv lmnrcrerap iestpsvvdl wtqmiensfi
      841 hawidaieqv ekhvsevstg lfeqarsryg sllqekrklv pewidqqlal evsnvrgqar
      901 ttlkheagkk rqlkplrkvl reytpdvlrl vpcwlctpea vsaifppeng lfdlvifdea
      961 sqcpvenalp aiyrgkqvvv agdekqlppt nlfritdded dlddeiedfa rdhhrkaqhl
     1021 ldwskpkmad qwltwhyrsv ndglinfsny afygkrmqta pivgfgkekp iefirvdgkw
     1081 mgrrnqkeae riadvvidil kydqqhptlg iitfnadqte lihdvldarg qsdpsvqdli
     1141 drarsrkdgd qyvglfvkni envqgderdi ilfsvayand qdgkmvsqfg alskdmgenr
     1201 lnvaitrarf kiyivcsfep sewtrvetys rgprllkryl eyakavsdgd yrrvntvleg
     1261 vldatavqsi envsiydspf eeevaiglrn lgyqvqsqig fsgyridlai vhpddpqrfi
     1321 lgiecdgamy hsskvarerd lyrqrfleqq gwsihrvwsr nwwksksgel ekiqleverl
     1381 rgrlr
//
LOCUS       WP_258110429             572 aa            linear   BCT 02-MAR-2025
DEFINITION  MutS-related protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258110429
VERSION     WP_258110429.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 572)
  AUTHORS   Obmolova,G., Ban,C., Hsieh,P. and Yang,W.
  TITLE     Crystal structures of mismatch repair protein MutS and its complex
            with a substrate DNA
  JOURNAL   Nature 407 (6805), 703-710 (2000)
   PUBMED   11048710
REFERENCE   2  (residues 1 to 572)
  AUTHORS   Tachiki,H., Kato,R., Masui,R., Hasegawa,K., Itakura,H., Fukuyama,K.
            and Kuramitsu,S.
  TITLE     Domain organization and functional analysis of Thermus thermophilus
            MutS protein
  JOURNAL   Nucleic Acids Res 26 (18), 4153-4159 (1998)
   PUBMED   9722634
  REMARK    Erratum:[Nucleic Acids Res 1998 Oct 15;26(20):following 4789]
REFERENCE   3  (residues 1 to 572)
  AUTHORS   Jiricny,J.
  TITLE     Colon cancer and DNA repair: have mismatches met their match?
  JOURNAL   Trends Genet 10 (5), 164-168 (1994)
   PUBMED   8036718
REFERENCE   4  (residues 1 to 572)
  AUTHORS   New,L., Liu,K. and Crouse,G.F.
  TITLE     The yeast gene MSH3 defines a new class of eukaryotic MutS
            homologues
  JOURNAL   Mol Gen Genet 239 (1-2), 97-108 (1993)
   PUBMED   8510668
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012700.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00488.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..572
                     /product="MutS-related protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0030983 - mismatched DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006298 - mismatch repair [Evidence IEA]"
                     /calculated_mol_wt=63406
     Region          <243..324
                     /region_name="MUTSd"
                     /note="DNA-binding domain of DNA mismatch repair MUTS
                     family; smart00533"
                     /db_xref="CDD:214710"
     Region          339..548
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            356..363
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213210"
     Site            order(359..360,362..364,398,437..438,473)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:213210"
     Site            405..418
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213210"
     Site            433..438
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213210"
     Site            441..444
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213210"
     Site            order(469..474,496)
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213210"
ORIGIN      
        1 mntagthsng apfldaatva alqlpdlwen lqpvtayghr wkqhlrpylp gqeahltael
       61 gqlrrdaqsi seatadrhre wlaglvdihp vlsslaagcn svsskealll kqfalhlrhg
      121 lqqsqnlcds slwdisvddv aavlhpfret eepgfsvahl adaayrqaae rlaearrarw
      181 qalqaesqkf aaihpalrml asgevvlslp egravvpele vrtdlvkqse tpvavrydsi
      241 pgphlvevsr rfeayegqle aegerllqal aaqlrrdlli wqrlvlavta mdarlskvvl
      301 lhawdgcvpe lgeadlhvva gvhpqirqrf wqqrqkqcfv pidfdsdgar vhaiagsnmg
      361 gktvamsvll laqiffqyal pvpakafssr lfgcvrfaap pdtdirhgls sfgqeivrlr
      421 avwrdatsya palmafdepg rstnpregea lvmgllsaaq saedgrmvlf athfaqptlr
      481 ediahwrvqg lrartdempa rneqaalset edearmalle qwmdyrlkrs qpgewraeav
      541 piarllglpd vileyteeyl sshsngeegt hr
//
LOCUS       WP_258110465             124 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258110465
VERSION     WP_258110465.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 124)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..124
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=14008
     Region          1..118
                     /region_name="Spo0F"
                     /note="Stage 0 sporulation initiation response regulator
                     Spo0F [Cell cycle control, cell division, chromosome
                     partitioning, Signal transduction mechanisms]; COG5803"
                     /db_xref="CDD:444505"
ORIGIN      
        1 mshkilvvdd qfgirillqe vleregyhtf laangatale lferespdlv lldmkipgmd
       61 gleilrnlrk lnqttrvimm taygeldliq eamqmgalsh ftkpfdidel reavheqlrg
      121 daid
//
LOCUS       WP_258110653             384 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome P450 [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258110653
VERSION     WP_258110653.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 384)
  AUTHORS   Werck-Reichhart,D. and Feyereisen,R.
  TITLE     Cytochromes P450: a success story
  JOURNAL   Genome Biol 1 (6), REVIEWS3003 (2000)
   PUBMED   11178272
REFERENCE   2  (residues 1 to 384)
  AUTHORS   Graham-Lorence,S., Amarneh,B., White,R.E., Peterson,J.A. and
            Simpson,E.R.
  TITLE     A three-dimensional model of aromatase cytochrome P450
  JOURNAL   Protein Sci 4 (6), 1065-1080 (1995)
   PUBMED   7549871
REFERENCE   3  (residues 1 to 384)
  AUTHORS   Degtyarenko,K.N. and Archakov,A.I.
  TITLE     Molecular evolution of P450 superfamily and P450-containing
            monooxygenase systems
  JOURNAL   FEBS Lett 332 (1-2), 1-8 (1993)
   PUBMED   8405421
REFERENCE   4  (residues 1 to 384)
  AUTHORS   Nelson,D.R., Kamataki,T., Waxman,D.J., Guengerich,F.P.,
            Estabrook,R.W., Feyereisen,R., Gonzalez,F.J., Coon,M.J.,
            Gunsalus,I.C., Gotoh,O. et al.
  TITLE     The P450 superfamily: update on new sequences, gene mapping,
            accession numbers, early trivial names of enzymes, and nomenclature
  JOURNAL   DNA Cell Biol 12 (1), 1-51 (1993)
   PUBMED   7678494
REFERENCE   5  (residues 1 to 384)
  AUTHORS   Guengerich,F.P.
  TITLE     Reactions and significance of cytochrome P-450 enzymes
  JOURNAL   J Biol Chem 266 (16), 10019-10022 (1991)
   PUBMED   2037557
REFERENCE   6  (residues 1 to 384)
  AUTHORS   Nebert,D.W. and Gonzalez,F.J.
  TITLE     P450 genes: structure, evolution, and regulation
  JOURNAL   Annu Rev Biochem 56, 945-993 (1987)
   PUBMED   3304150
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012296.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00067.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..384
                     /product="cytochrome P450"
                     /GO_function="GO:0004497 - monooxygenase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=42823
     Region          20..382
                     /region_name="P450_EryK-like"
                     /note="cytochrome P450 EryK and similar cytochrome P450s;
                     cd11032"
                     /db_xref="CDD:410658"
     Site            order(68,70..71,154..155,173,220,223..225,227..228,275,
                     372..373)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410658"
     Site            order(69..70,77,81,88,133,220..221,224..225,228..229,232,
                     270,274,276,299,326..328,331..332,334..336,339..340)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410658"
ORIGIN      
        1 midfserdkl npftwyermr renpvlvded gdvhafgyea vkkvlfehel fssrrgpadd
       61 pnnpiaasli sldpprhrql rslvsqaftp raiaalapri eeissgliqd mkatsgevdf
      121 vetfsvplpv tviaellgip ledrdkfkvw sdaiisgtae mdsggelnft daqremvmyf
      181 gemiaertrr pkedfvsqll aatvdgerls ptdilgfcil llvagnettt nllsnailtl
      241 nehqefwssm rdsaamvenv veevlryrsp vqhmyrtatr dlelggvqip anaavvawmg
      301 sanrdeaafe haeqfvpgrs pnrhvafghg ihfclgapla rleakisltq larefrridv
      361 dtsrlvsipt sfvygfyhmp vtla
//
LOCUS       WP_258110175             186 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfocyanin-like copper-binding protein [Alicyclobacillus sp.
            SP_1].
ACCESSION   WP_258110175
VERSION     WP_258110175.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Komorowski,L. and Schafer,G.
  TITLE     Sulfocyanin and subunit II, two copper proteins with novel
            features, provide new insight into the archaeal SoxM oxidase
            supercomplex
  JOURNAL   FEBS Lett 487 (3), 351-355 (2001)
   PUBMED   11163357
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018257.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06525.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..186
                     /product="sulfocyanin-like copper-binding protein"
                     /GO_function="GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=19874
ORIGIN      
        1 mtwrsrlnva gvmvvalgvs alatgcsttn pntlskfltv ntsahtvnve liagytpend
       61 ylnfdgfahg qlvvtvptgy kvnfdyynna gipvdigvyg skygklafak agdsirdiml
      121 npdsipsaia pgtsenikft adrsgtfkia nylsryqmfq thpyddlgmw atlkvvngat
      181 psisvs
//
LOCUS       WP_258110691             359 aa            linear   BCT 02-MAR-2025
DEFINITION  phage baseplate assembly protein [Klebsiella quasipneumoniae].
ACCESSION   WP_258110691
VERSION     WP_258110691.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF044847.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21683.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..359
                     /product="phage baseplate assembly protein"
                     /calculated_mol_wt=40266
     Region          6..349
                     /region_name="COG4379"
                     /note="Mu-like prophage tail protein gpP [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443505"
ORIGIN      
        1 msddldtvrl tvgnkiiegw dsvrvtrsie rfpsdfslgl mdyypgtndk qlvqkgqsce
       61 vrigndlvlt gyvdswepsi trsrhevqan grskcqdlvd csaewpnnvi nqsdalsias
      121 rlaswygisv scdvsdlvnv pqftinwges pqeiiervtr wsallyydlp dgnlfltrvg
      181 trraasgvae genieqayyr admserfsdy vgismsvspi agfspdtayd svtlatardp
      241 eaakmryrkr ivivestlma sqqaqraidw emnrrygrsk qlsvtidswr dkagklwepn
      301 tlipvniptl klpntellia dvtfmrdsdg tharltlmpp eafavqpyaf yqqlagfnq
//
LOCUS       WP_258110686             204 aa            linear   BCT 02-MAR-2025
DEFINITION  YkoP family protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258110686
VERSION     WP_258110686.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046921.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22790.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..204
                     /product="YkoP family protein"
                     /calculated_mol_wt=23644
ORIGIN      
        1 mwrsmmratw qafehlfhwa frlkpiqpge ehlfyvakrr yygrqfqvdd ivvhrfdkvv
       61 elhmnndmia dilstetemm pivlrllkea nrsvsilarl leeeefrdan aiygitfihr
      121 girrfglhai plqtgilrsi trwhlknvfr mvnpnadeil knhmdvfepk lvaasrarfv
      181 arhgvaassa avaeqsvvad hvls
//
LOCUS       WP_258110699             218 aa            linear   BCT 02-MAR-2025
DEFINITION  sterol desaturase family protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258110699
VERSION     WP_258110699.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 218)
  AUTHORS   Zhu,G., Koszelak-Rosenblum,M., Connelly,S.M., Dumont,M.E. and
            Malkowski,M.G.
  TITLE     The Crystal Structure of an Integral Membrane Fatty Acid
            alpha-Hydroxylase
  JOURNAL   J Biol Chem 290 (50), 29820-29833 (2015)
   PUBMED   26515067
REFERENCE   2  (residues 1 to 218)
  AUTHORS   Lagarde,D. and Vermaas,W.
  TITLE     The zeaxanthin biosynthesis enzyme beta-carotene hydroxylase is
            involved in myxoxanthophyll synthesis in Synechocystis sp. PCC 6803
  JOURNAL   FEBS Lett 454 (3), 247-251 (1999)
   PUBMED   10431816
REFERENCE   3  (residues 1 to 218)
  AUTHORS   Husselstein,T., Schaller,H., Gachotte,D. and Benveniste,P.
  TITLE     Delta7-sterol-C5-desaturase: molecular characterization and
            functional expression of wild-type and mutant alleles
  JOURNAL   Plant Mol Biol 39 (5), 891-906 (1999)
   PUBMED   10344195
REFERENCE   4  (residues 1 to 218)
  AUTHORS   Mitchell,A.G. and Martin,C.E.
  TITLE     Fah1p, a Saccharomyces cerevisiae cytochrome b5 fusion protein, and
            its Arabidopsis thaliana homolog that lacks the cytochrome b5
            domain both function in the alpha-hydroxylation of
            sphingolipid-associated very long chain fatty acids
  JOURNAL   J Biol Chem 272 (45), 28281-28288 (1997)
   PUBMED   9353282
REFERENCE   5  (residues 1 to 218)
  AUTHORS   Bard,M., Bruner,D.A., Pierson,C.A., Lees,N.D., Biermann,B.,
            Frye,L., Koegel,C. and Barbuch,R.
  TITLE     Cloning and characterization of ERG25, the Saccharomyces cerevisiae
            gene encoding C-4 sterol methyl oxidase
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 186-190 (1996)
   PUBMED   8552601
REFERENCE   6  (residues 1 to 218)
  AUTHORS   Aarts,M.G., Keijzer,C.J., Stiekema,W.J. and Pereira,A.
  TITLE     Molecular characterization of the CER1 gene of arabidopsis involved
            in epicuticular wax biosynthesis and pollen fertility
  JOURNAL   Plant Cell 7 (12), 2115-2127 (1995)
   PUBMED   8718622
REFERENCE   7  (residues 1 to 218)
  AUTHORS   Arthington,B.A., Bennett,L.G., Skatrud,P.L., Guynn,C.J.,
            Barbuch,R.J., Ulbright,C.E. and Bard,M.
  TITLE     Cloning, disruption and sequence of the gene encoding yeast C-5
            sterol desaturase
  JOURNAL   Gene 102 (1), 39-44 (1991)
   PUBMED   1864507
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016041.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04116.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..218
                     /product="sterol desaturase family protein"
                     /GO_function="GO:0005506 - iron ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /GO_process="GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /calculated_mol_wt=25006
     Region          <38..196
                     /region_name="FA_hydroxylase"
                     /note="Fatty acid hydroxylase; cl01132"
                     /db_xref="CDD:412761"
ORIGIN      
        1 mryatefltd rrvlfllsvs tvsfigtltf plhtmdwlal aggvvvwyft eyivhrfilh
       61 gilakvmpka ydgharhhsh peelkylltp nhynipgyvf favvaylvtr hfdttsafll
      121 tlslsqiyye wshfvshrpi vplspwgkwm kkfhllhhfk nehywfgvtn atldvlvgsd
      181 pepstvpsys tadkkrygeh gksadgdgvf qepshdip
//
LOCUS       WP_258110704             336 aa            linear   BCT 02-MAR-2025
DEFINITION  G1 family glutamic endopeptidase [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258110704
VERSION     WP_258110704.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 336)
  AUTHORS   Jensen,K., Ostergaard,P.R., Wilting,R. and Lassen,S.F.
  TITLE     Identification and characterization of a bacterial glutamic
            peptidase
  JOURNAL   BMC Biochem 11, 47 (2010)
   PUBMED   21122090
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013950.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01828.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..336
                     /product="G1 family glutamic endopeptidase"
                     /GO_function="GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=36713
     Region          110..333
                     /region_name="Peptidase_G1_like"
                     /note="Peptidases of the G1 family and homologs that might
                     lack peptidase activity; cl03371"
                     /db_xref="CDD:446078"
ORIGIN      
        1 maifstftla ipvahaatnn ptapamhhfh tppanfnpln vsdaqleeyg fpvrptnpqy
       61 lsgwiaamkt frvmlkptfk vryirktmpk gkllnpkvet tsntiehavn piwsgyldya
      121 qnatynftdl qgtfiaspid saysstgshy sswfgfggys gleghnspyv lqsgisatln
      181 sagntsfapf weiggfnyeq nlgylaiysg dtmyvdisyt vnaggdfkyf venestgkav
      241 sgyvedssgy ydgteaeait eansvdgqin cgdfhsvsfn nistnsisnq rygitdqdsp
      301 yqifrltaed sndtvlinas qptssssfvt ywhnat
//
LOCUS       WP_258110730             302 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Alicyclobacillus sp.
            SP_1].
ACCESSION   WP_258110730
VERSION     WP_258110730.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 302)
  AUTHORS   Sebulsky,M.T., Shilton,B.H., Speziali,C.D. and Heinrichs,D.E.
  TITLE     The role of FhuD2 in iron(III)-hydroxamate transport in
            Staphylococcus aureus. Demonstration that FhuD2 binds
            iron(III)-hydroxamates but with minimal conformational change and
            implication of mutations on transport
  JOURNAL   J Biol Chem 278 (50), 49890-49900 (2003)
   PUBMED   14514690
REFERENCE   2  (residues 1 to 302)
  AUTHORS   Borths,E.L., Locher,K.P., Lee,A.T. and Rees,D.C.
  TITLE     The structure of Escherichia coli BtuF and binding to its cognate
            ATP binding cassette transporter
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16642-16647 (2002)
   PUBMED   12475936
REFERENCE   3  (residues 1 to 302)
  AUTHORS   Staudenmaier,H., Van Hove,B., Yaraghi,Z. and Braun,V.
  TITLE     Nucleotide sequences of the fecBCDE genes and locations of the
            proteins suggest a periplasmic-binding-protein-dependent transport
            mechanism for iron(III) dicitrate in Escherichia coli
  JOURNAL   J Bacteriol 171 (5), 2626-2633 (1989)
   PUBMED   2651410
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01497.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..302
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=33464
     Region          6..261
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(80..81,84,109)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238347"
ORIGIN      
        1 mssslriisl cpsnteliha lgltenlvav dnysdypapl lqnlprlgpd lhinmervqe
       61 lkpdlvlasl svpgmervvs slkatgmnyv vlspkslddi yrdimtlsea tnsesirrta
      121 veavrslktr vetvrqlsgn avqesdipri ywewwpnpvf spaadnwlte istiaggvnc
      181 fsnhsgsqvk detgelvggs radfylavwt gipqhkvpvk kmfarpyihq lpaylhnrvy
      241 ilseglycrp sqrlidgleq lftllhpnla rqhgftlenn apirgpygkd ilsedlsksg
      301 gt
//
LOCUS       WP_258110814             129 aa            linear   BCT 02-MAR-2025
DEFINITION  Mov34/MPN/PAD-1 family protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258110814
VERSION     WP_258110814.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 129)
  AUTHORS   Iyer,L.M., Zhang,D., Rogozin,I.B. and Aravind,L.
  TITLE     Evolution of the deaminase fold and multiple origins of eukaryotic
            editing and mutagenic nucleic acid deaminases from bacterial toxin
            systems
  JOURNAL   Nucleic Acids Res 39 (22), 9473-9497 (2011)
   PUBMED   21890906
REFERENCE   2  (residues 1 to 129)
  AUTHORS   Iyer,L.M., Burroughs,A.M. and Aravind,L.
  TITLE     The prokaryotic antecedents of the ubiquitin-signaling system and
            the early evolution of ubiquitin-like beta-grasp domains
  JOURNAL   Genome Biol 7 (7), R60 (2006)
   PUBMED   16859499
REFERENCE   3  (residues 1 to 129)
  AUTHORS   Burns,K.E., Baumgart,S., Dorrestein,P.C., Zhai,H., McLafferty,F.W.
            and Begley,T.P.
  TITLE     Reconstitution of a new cysteine biosynthetic pathway in
            Mycobacterium tuberculosis
  JOURNAL   J Am Chem Soc 127 (33), 11602-11603 (2005)
   PUBMED   16104727
REFERENCE   4  (residues 1 to 129)
  AUTHORS   Verma,R., Aravind,L., Oania,R., McDonald,W.H., Yates,J.R. 3rd,
            Koonin,E.V. and Deshaies,R.J.
  TITLE     Role of Rpn11 metalloprotease in deubiquitination and degradation
            by the 26S proteasome
  JOURNAL   Science 298 (5593), 611-615 (2002)
   PUBMED   12183636
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025819.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14464.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..129
                     /product="Mov34/MPN/PAD-1 family protein"
                     /calculated_mol_wt=14227
     Region          20..111
                     /region_name="Rri1"
                     /note="Proteasome lid subunit RPN8/RPN11, contains
                     Jab1/MPN domain metalloenzyme (JAMM) motif
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1310"
                     /db_xref="CDD:440921"
ORIGIN      
        1 miswskcahl ppwwtsmsge vlahlqqalp neaaglvmar sdyiffyklp vlatrvafql
       61 tpdhvlklgt rlaengevil stvhshpngr lgmsaldgsl awwsndhllv sfdlvttshv
      121 isfyksqll
//
LOCUS       WP_258110975             715 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5054 domain-containing protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258110975
VERSION     WP_258110975.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16477.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..715
                     /product="DUF5054 domain-containing protein"
                     /calculated_mol_wt=80102
     Region          6..259
                     /region_name="GH38N_AMII_like_1"
                     /note="N-terminal catalytic domain of mainly
                     uncharacterized eukaryotic proteins similar to
                     alpha-mannosidases; glycoside hydrolase family 38 (GH38);
                     cd10791"
                     /db_xref="CDD:212103"
     Site            order(14,16,19,126,128,150,233)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:212103"
     Region          261..576
                     /region_name="Glyco_hydro_38C"
                     /note="Glycosyl hydrolases family 38 C-terminal domain;
                     cl20343"
                     /db_xref="CDD:418856"
ORIGIN      
        1 mssiervhvi fkthldvgft dlaknviqty vdeyipraln laeqrpgefl wttgswlihh
       61 ylkvagaadr krmeeaieag riawhalpft mhseladerl fefglslske ldrrfgkqtv
      121 aakmtdvpgh tlavarllak ngveffhigv npgsavpqvp pvfrwrtadg tevivayhds
      181 ygealciegl pdalvfahth dnhgpqaaea ldalyadlgv rfpgaeigps tmdafarklg
      241 kvkeqlpvvs eeigdtwihg igtdplkvaq frallrcrda wleagkladd saiykefsew
      301 lllvpehtwg vdiktyltdy vnyakgdfgq arsadkipvv lapkgceyvy dwarktrdek
      361 csysfveqsw qeqrdyvtka mralprelee easealaalc psallvsesr aqsedrttgk
      421 atmtqtetev asvkrlplva gesyslglfd atwdntgais qlcdatgrdw aggairlgvy
      481 tyevfdaedy rrwyqdycsr grteyetwit cdfgkpgies leppvhhrtv eavarglvrw
      541 eqgdcdivra elqlpewatl dagapaqvvv eyafsktser idirldclhk dayrlpeasw
      601 fsfglnvdhp tnwqlhklge wvspvqvvrg gnrnlhalgr glryngadgs alietldapl
      661 vavgapgllr fdrtiaqnpg ifhfnlhnnv wgtnfpmwfe gdmryrfrvs llrst
//
LOCUS       WP_258111086             316 aa            linear   BCT 02-MAR-2025
DEFINITION  Mov34/MPN/PAD-1 family protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258111086
VERSION     WP_258111086.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 316)
  AUTHORS   Iyer,L.M., Zhang,D., Rogozin,I.B. and Aravind,L.
  TITLE     Evolution of the deaminase fold and multiple origins of eukaryotic
            editing and mutagenic nucleic acid deaminases from bacterial toxin
            systems
  JOURNAL   Nucleic Acids Res 39 (22), 9473-9497 (2011)
   PUBMED   21890906
REFERENCE   2  (residues 1 to 316)
  AUTHORS   Iyer,L.M., Burroughs,A.M. and Aravind,L.
  TITLE     The prokaryotic antecedents of the ubiquitin-signaling system and
            the early evolution of ubiquitin-like beta-grasp domains
  JOURNAL   Genome Biol 7 (7), R60 (2006)
   PUBMED   16859499
REFERENCE   3  (residues 1 to 316)
  AUTHORS   Burns,K.E., Baumgart,S., Dorrestein,P.C., Zhai,H., McLafferty,F.W.
            and Begley,T.P.
  TITLE     Reconstitution of a new cysteine biosynthetic pathway in
            Mycobacterium tuberculosis
  JOURNAL   J Am Chem Soc 127 (33), 11602-11603 (2005)
   PUBMED   16104727
REFERENCE   4  (residues 1 to 316)
  AUTHORS   Verma,R., Aravind,L., Oania,R., McDonald,W.H., Yates,J.R. 3rd,
            Koonin,E.V. and Deshaies,R.J.
  TITLE     Role of Rpn11 metalloprotease in deubiquitination and degradation
            by the 26S proteasome
  JOURNAL   Science 298 (5593), 611-615 (2002)
   PUBMED   12183636
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025819.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14464.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..316
                     /product="Mov34/MPN/PAD-1 family protein"
                     /calculated_mol_wt=35578
     Region          53..>89
                     /region_name="Prok_Ub"
                     /note="Prokaryotic Ubiquitin; cl14020"
                     /db_xref="CDD:449323"
     Region          <196..290
                     /region_name="PRTRC_A"
                     /note="PRTRC system protein A; TIGR03735"
                     /db_xref="CDD:163447"
ORIGIN      
        1 mtlehqdqms ifdllpeeea kafksdepta skkktkttap aaskeepepd vyeidrvvyy
       61 aghrldvpsr tmkleavraw laeqfpeltk ercelvydae nghivpvlka hkkgtdrplt
      121 vfrtppsdpv ppvyhyldah gttweirqtq tgrfqvplrg qgtlepdsaf qanlpkmpya
      181 clrdivarch aepdvehlay vvydrrsgfa vlwpeqhana vsvvgrgvle hedffvvahi
      241 hshgrlpaff sstddadevr tglygvlgrc dkdrpdllfr mscgghfrpl apevlfdgdl
      301 stlvdtdflk kteear
//
LOCUS       WP_258111255              36 aa            linear   BCT 02-MAR-2025
DEFINITION  putative holin-like toxin [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258111255
VERSION     WP_258111255.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 36)
  AUTHORS   Rajesh,T., Anthony,T., Saranya,S., Pushpam,P.L. and Gunasekaran,P.
  TITLE     Functional characterization of a new holin-like antibacterial
            protein coding gene tmp1 from goat skin surface metagenome
  JOURNAL   Appl Microbiol Biotechnol 89 (4), 1061-1073 (2011)
   PUBMED   20927512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16935.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..36
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..36
                     /product="putative holin-like toxin"
                     /calculated_mol_wt=3695
ORIGIN      
        1 msiaraltlm iqfgllivsl lavivavval arksdk
//
LOCUS       WP_258111327             456 aa            linear   BCT 02-MAR-2025
DEFINITION  MurT ligase domain-containing protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258111327
VERSION     WP_258111327.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 456)
  AUTHORS   Noldeke,E.R., Muckenfuss,L.M., Niemann,V., Muller,A., Stork,E.,
            Zocher,G., Schneider,T. and Stehle,T.
  TITLE     Structural basis of cell wall peptidoglycan amidation by the
            GatD/MurT complex of Staphylococcus aureus
  JOURNAL   Sci Rep 8 (1), 12953 (2018)
   PUBMED   30154570
  REMARK    Erratum:[Sci Rep. 2018 Dec 21;8(1):18073. doi:
            10.1038/s41598-018-37082-9.. PMID: 30573753]
            Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019952.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08353.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..456
                     /product="MurT ligase domain-containing protein"
                     /calculated_mol_wt=48960
     Region          <36..>297
                     /region_name="MurD"
                     /note="UDP-N-acetylmuramoylalanine-D-glutamate ligase
                     [Cell wall/membrane/envelope biogenesis]; COG0771"
                     /db_xref="CDD:440534"
     Region          316..429
                     /region_name="MurT_C"
                     /note="MurT ligase C-terminal; pfam08353"
                     /db_xref="CDD:462442"
ORIGIN      
        1 mfalwiakll illlrlrgks atslpgkvam rlspkllarl cnslervviv tgtngktttv
       61 rllaammree tpiitnaega nltqgilsal laasnwrgrl asktalfevd eatlpniasc
      121 mpvkllvvtn vfrdqldryg eidntidkii agaafvrgtv lvnaddplar higlrfagas
      181 ktfgfspega smtgfdgvrd gafclqcgaa leydgyfygq lglyrcpqcd fsrphpdfvg
      241 hysqgllqfh evgtpdtsyr vpvrglynvd nllaavaaar vfgisseair sgidhfkspi
      301 grmqtfstsp qsilnliknp agcdsvltai cadpaekvvc vgindqaadg rdvswlwdan
      361 feqlaefgrv hrfvvsgdra ldmavrfkya gvptasvdvv pdleaaldaa lsaaqsadgl
      421 svyvlttytl ihkaaallae rrvadveiay hrasvs
//
LOCUS       WP_258110524             264 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfocyanin-like copper-binding protein [Alicyclobacillus sp.
            SP_1].
ACCESSION   WP_258110524
VERSION     WP_258110524.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 264)
  AUTHORS   Komorowski,L. and Schafer,G.
  TITLE     Sulfocyanin and subunit II, two copper proteins with novel
            features, provide new insight into the archaeal SoxM oxidase
            supercomplex
  JOURNAL   FEBS Lett 487 (3), 351-355 (2001)
   PUBMED   11163357
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018257.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06525.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..264
                     /product="sulfocyanin-like copper-binding protein"
                     /GO_function="GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=27245
     Region          133..259
                     /region_name="Cupredoxin"
                     /note="Cupredoxin superfamily; cl19115"
                     /db_xref="CDD:473140"
ORIGIN      
        1 mklkhwiaps ivatsvliag gsvfaattar hgqyatnwsa mmgqapsnvg sagsgvnggg
       61 gygrmggygs gangdggygm mggygsgang sggygmmggg arganrslvn naqlsqlvrq
      121 geagavinrk tntvtyqgqn vtlvalasph gkpnmtweid glvnptvvvs skaqvrvtlv
      181 ntdwgymhgf evtttpppyp fmsmmaintd flqmplpqrt tkalpsaqyd ttsgllnlra
      241 gtyyylcpvp ghaqqgmhgt lrvt
//
LOCUS       WP_258111362             412 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258111362
VERSION     WP_258111362.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..412
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44145
     Region          17..352
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(27..28,31..32,35,67,117..118,120..122,125,145,
                     148..149,152,222,225..226,229..231,234,261,265,318..319,
                     323,327,343,346..347,350..351)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340887"
ORIGIN      
        1 mttagappls trfsipvyfl fgqsmlmnlg ffmlipmlsi hylslgatal fvgnlyavri
       61 laqqglqlfg gyvsdrvpyr lvlfigclir aigfalfgvm rpsewlflaa tlfgiggalf
      121 gpaqnaalva lipadkqara ftirqaasnv gttvgpvlga flvfhhfsli cwisgllfmv
      181 lgiaslfilp krqarpvekp tfwrgvhsir knylflafvv lfmgyyviyq qmyiaipdll
      241 stlhapksal gelfsleail eiaasypmva fmtrrghlws aprlmaigml vmsigwipll
      301 fhvnlatlla pvvtisigsv ialpnrqtyt aalanpsyia tyfgvaslsm aigasagasg
      361 gswlmhvlgh pagplavpaa avfvgvaglc gllflrlpat rrsapetvds al
//
LOCUS       WP_258111444             261 aa            linear   BCT 02-MAR-2025
DEFINITION  enoyl-CoA hydratase-related protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258111444
VERSION     WP_258111444.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012596.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00378.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..261
                     /product="enoyl-CoA hydratase-related protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=27961
     Region          13..261
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     Site            order(27,29,60,65..69,108,110..112,134..135,138)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(67,112)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(92,100,121..124,136..139,145,147..149,151..152,
                     157..158,160..161,163..164,167,178,181,196,199..200)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
ORIGIN      
        1 mttqyqwinv eteghvatvt lcreqaansl sqalclefve amgelqeadv ravvltgqgk
       61 kafcagadlk erkgmaeaev rvavhrirqv vesvaalpmp tiaavngvaf gggteialaa
      121 dlricareaq fgltetglgi vpgaggtqrl prlvgvlrak eliytarris aeeaehiglv
      181 levvesegll trakelaqkv aangpiavra akwaidhgls epmarglqie eeayervlnt
      241 edrleglraf aekrppvyrg k
//
LOCUS       WP_258111628             459 aa            linear   BCT 02-MAR-2025
DEFINITION  transglycosylase SLT domain-containing protein [Alicyclobacillus
            sp. SP_1].
ACCESSION   WP_258111628
VERSION     WP_258111628.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 459)
  AUTHORS   Koraimann,G.
  TITLE     Lytic transglycosylases in macromolecular transport systems of
            Gram-negative bacteria
  JOURNAL   Cell Mol Life Sci 60 (11), 2371-2388 (2003)
   PUBMED   14625683
REFERENCE   2  (residues 1 to 459)
  AUTHORS   Mushegian,A.R., Fullner,K.J., Koonin,E.V. and Nester,E.W.
  TITLE     A family of lysozyme-like virulence factors in bacterial pathogens
            of plants and animals
  JOURNAL   Proc Natl Acad Sci U S A 93 (14), 7321-7326 (1996)
   PUBMED   8692991
REFERENCE   3  (residues 1 to 459)
  AUTHORS   Thunnissen,A.M., Rozeboom,H.J., Kalk,K.H. and Dijkstra,B.W.
  TITLE     Structure of the 70-kDa soluble lytic transglycosylase complexed
            with bulgecin A. Implications for the enzymatic mechanism
  JOURNAL   Biochemistry 34 (39), 12729-12737 (1995)
   PUBMED   7548026
REFERENCE   4  (residues 1 to 459)
  AUTHORS   Koonin,E.V. and Rudd,K.E.
  TITLE     A conserved domain in putative bacterial and bacteriophage
            transglycosylases
  JOURNAL   Trends Biochem Sci 19 (3), 106-107 (1994)
   PUBMED   8203016
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013618.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01464.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..459
                     /product="transglycosylase SLT domain-containing protein"
                     /calculated_mol_wt=49319
     Region          308..445
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
ORIGIN      
        1 mkrriswssw lrfptepkdv fpwlvkrliv saglgnsvgi vllvlagvsl lgflvgdyqg
       61 tgggtvgang sirlgsataa knhallshdt evadawqqgl satqiaqvqv eqaglpaavl
      121 laigkvennl nppdahryar flqphlvwht fedvtvrtwt tenkqgqvqv htsvtrtpvt
      181 rlvsadlwdg tlvnryryvs hrtgqahhst lterivlvnt ertytwsrvw allkaypagl
      241 gsghtevlrk nrinrqtiag liaavddtis dpyvqamvdg vdypggvqgl gtlsgiapar
      301 vdvvqnvlry rsyieraaae chlpavliag vmaeesggre hqgqgvltsy agamglmqve
      361 pataagwvvh gvqvgnqava ylsqagsnll lgslylsely hqfgenveet lsaynaggga
      421 eeealaegyt vaqnsqteny vsvilgrwip alqqsfgpl
//
LOCUS       WP_258111694             328 aa            linear   BCT 02-MAR-2025
DEFINITION  ROK family protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258111694
VERSION     WP_258111694.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..328
                     /product="ROK family protein"
                     /calculated_mol_wt=34343
     Region          9..308
                     /region_name="ASKHA_ATPase_ROK_BsXylR-like"
                     /note="ATPase-like domain of Bacillus subtilis xylose
                     repressor (XylR) and similar proteins; cd24076"
                     /db_xref="CDD:466926"
ORIGIN      
        1 mlgfnatagy avgvelgvdf irvltvnlag ksiscnelsl edtsvrnvvt eivtcikres
       61 ailpksklgi igvglgvpgl vdftsgnily apnlgwsdvp iraymeahin lpvfvdnean
      121 agalaeqlfg vgttdenaiy fsvgagigvg iilnhtiirg sggaagefgh miietrglrc
      181 scgsrgclem yastralvak yaqltghtkt vdeiiqdlhv gdpnareaid svgrylgmgv
      241 snlinglnps lvvignhlse ardrlltivt evvdtsalkv pgtiariels slgrnstaig
      301 aaslalndyf qgpfpfshaa epsrsgyr
//
LOCUS       WP_258111733             172 aa            linear   BCT 02-MAR-2025
DEFINITION  DJ-1/PfpI family protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258111733
VERSION     WP_258111733.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 172)
  AUTHORS   Ohnishi,Y., Yamazaki,H., Kato,J.Y., Tomono,A. and Horinouchi,S.
  TITLE     AdpA, a central transcriptional regulator in the A-factor
            regulatory cascade that leads to morphological development and
            secondary metabolism in Streptomyces griseus
  JOURNAL   Biosci Biotechnol Biochem 69 (3), 431-439 (2005)
   PUBMED   15784968
REFERENCE   2  (residues 1 to 172)
  AUTHORS   Halio,S.B., Blumentals,I.I., Short,S.A., Merrill,B.M. and
            Kelly,R.M.
  TITLE     Sequence, expression in Escherichia coli, and analysis of the gene
            encoding a novel intracellular protease (PfpI) from the
            hyperthermophilic archaeon Pyrococcus furiosus
  JOURNAL   J Bacteriol 178 (9), 2605-2612 (1996)
   PUBMED   8626329
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01965.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..172
                     /product="DJ-1/PfpI family protein"
                     /calculated_mol_wt=18110
     Region          1..170
                     /region_name="YajL"
                     /note="Protein/nucleotide deglycase, PfpI/YajL/DJ-1 family
                     (repair of methylglyoxal-glycated proteins and nucleic
                     acids) [Defense mechanisms]; COG0693"
                     /db_xref="CDD:440457"
ORIGIN      
        1 mkaalmaleg cslwqtgqla rvlvkndwrv rtltlqgspi atdggqrivs dgkleeavam
       61 eynmvllpgg dyatasvfna hamrflrqad ghnawiaatg rgvallaaag mlgglrvavd
      121 eptkiafptl ftnmrlvmgk aavdgnivta hatadaevte avakyvrllt tl
//
LOCUS       WP_258111750             823 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Alicyclobacillus
            sp. SP_1].
ACCESSION   WP_258111750
VERSION     WP_258111750.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 823)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 823)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 823)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 823)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..823
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=90339
     Region          39..540
                     /region_name="GsiA"
                     /note="ABC-type glutathione transport system ATPase
                     component, contains duplicated ATPase domain
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1123"
                     /db_xref="CDD:440740"
     Region          571..806
                     /region_name="EcfT"
                     /note="ECF-type transporter transmembrane protein EcfT
                     [Coenzyme transport and metabolism]; COG0619"
                     /db_xref="CDD:440384"
     Site            order(589..590,592..593,596..597,634,638..639,642..643,
                     676,680,687,690..691,696,712,716..717,719..721,723..724,
                     727..728,731..732,752..753,755..757,759..761,763..764,
                     766..767,771,774..775,786,788)
                     /site_type="other"
                     /note="S component interface [polypeptide binding]"
                     /db_xref="CDD:410987"
     Site            order(715,719,722..723,725..726,766,769..770,772..777,780,
                     786..787,791,793)
                     /site_type="other"
                     /note="A' component interface [polypeptide binding]"
                     /db_xref="CDD:410987"
     Site            order(736..743,754,757..758,761)
                     /site_type="other"
                     /note="A component interface [polypeptide binding]"
                     /db_xref="CDD:410987"
ORIGIN      
        1 mstrqpvses plqrdrqnrv rlglenetvp fgeqawseev lldargltvr yevgelpils
       61 disfrmhrhe svlllgpsgc gkstlamvla glvpnsveav legevwhhae lskpgaigyv
      121 fqdpeaqfcm lqvadeiafg lenhrvlpaq mtermhasld avhlsvplda rheafsggmk
      181 qklavacala mepellvlde ptanldplst aqvfhtlasl radgrsllii ehkfeailpy
      241 vdtvvlftad grihrqgpva qviasewewm qatgistrrp lptpawsqta gesseakrll
      301 rvasdtvatr saaqqgalge vvqatgacva lggkpilhsi dftlrqgefv alvgpngsgk
      361 stllqtlagl vlpsggsvrl fgkaskawks pelyrkiavs fqnpesqfvy ervgeelsnr
      421 llpdgvpddi vrllskfgld glaeqspfal sqgqkrrlsv aamlreehdl ylldeptygq
      481 dartleallk tldelhrsgr tivvsthdme laarfatrvv alrdgeivfd gpptelfqnp
      541 ewmgalhlls dvelpkvdps ptwtppptak vrrrppvahl hpvwfflavl ssaavmmfaq
      601 nvwqglamla wplillmavg wqtprkiavr lspfvllyvl siisftlnaa vppgpdtfhf
      661 lwwnpslagf idgivlacrm tgavalgflf lvslditdlt vgltkdfrlp pkfaygllag
      721 frvmplfqte wqkirqarkv rgkdprtplv raatfalpil aqavrmserv aiamearglv
      781 qeaslsakhr tffravrvrt rdwvvavllp lsvalllvlt arl
//
LOCUS       WP_258111837             215 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Alicyclobacillus sp.
            SP_1].
ACCESSION   WP_258111837
VERSION     WP_258111837.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 215)
  AUTHORS   Ren,J., Sainsbury,S., Nettleship,J.E., Saunders,N.J. and Owens,R.J.
  TITLE     The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals
            a novel protein fold incorporating a helix-turn-helix motif
  JOURNAL   Proteins 78 (7), 1798-1802 (2010)
   PUBMED   20196080
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013540.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01381.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..215
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=24126
     Region          11..71
                     /region_name="HipB"
                     /note="Transcriptional regulator, contains XRE-family HTH
                     domain [Transcription]; COG1396"
                     /db_xref="CDD:441006"
     Region          168..199
                     /region_name="DUF1232"
                     /note="Protein of unknown function (DUF1232); pfam06803"
                     /db_xref="CDD:462011"
ORIGIN      
        1 maespsrele rlvkdllqdq emsmrrlaaa tgidvaaisk mlsgkqrvnp eylqriaecl
       61 kvnpivlfea agfqlernms avepnltaic aglfkdlgwn iqctrldier elqkcegyan
      121 teegqllive kfvekreqln dsgvfsgvld emyaaflisg isdierqilg gallyfivat
      181 daipdylfpv gymddaiald isykkwkeyq rrlss
//
LOCUS       WP_258111850             396 aa            linear   BCT 02-MAR-2025
DEFINITION  YheC/YheD family protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258111850
VERSION     WP_258111850.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 396)
  AUTHORS   Iyer,L.M., Abhiman,S., Maxwell Burroughs,A. and Aravind,L.
  TITLE     Amidoligases with ATP-grasp, glutamine synthetase-like and
            acetyltransferase-like domains: synthesis of novel metabolites and
            peptide modifications of proteins
  JOURNAL   Mol Biosyst 5 (12), 1636-1660 (2009)
   PUBMED   20023723
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025756.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14398.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..396
                     /product="YheC/YheD family protein"
                     /calculated_mol_wt=44062
     Region          3..362
                     /region_name="YheC"
                     /note="Spore coat protein YheC/YheD, ATP-grasp superfamily
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG5891"
                     /db_xref="CDD:444593"
ORIGIN      
        1 mlvvissqsp ksaihprlaf ayqtlataae hegmdllvvp ptaqlgsvsa lvgcrydevd
       61 avgvwheqsh pakrtvyfdf mylsdiranp sryrllmrsl rqharpvfnp pmppkdhlfq
      121 ilsqsspstd gqipktfqei saesairile qvpklwikpv hgsggrnsly verrksnqfl
      181 vvaeqffgqt ivadlnrrel lqllsmatrr srylgqmhvp llqtadkrtv dirvtlvrnr
      241 cgaweivstt grssqpdsll tnyhaggkvv slterteesv awllqshmsd ddisrahrfg
      301 ltvaeklqat lphlailgvd igqttdgqqy vydcnarpgr diltnseiah ylqrvvafah
      361 wleeqsygll pngtvcdqss tartasslcs qvdsst
//
LOCUS       WP_258111851             366 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258111851
VERSION     WP_258111851.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 366)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 366)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..366
                     /product="phosphotransferase"
                     /calculated_mol_wt=42171
     Region          46..362
                     /region_name="CotI"
                     /note="Spore coat protein CotI/CotS, protein kinase
                     superfamily [Cell cycle control, cell division, chromosome
                     partitioning]; COG5881"
                     /db_xref="CDD:444583"
ORIGIN      
        1 mgkfrtllst qvssaqdevf ldlewgswmk qsashghehp qawlalalkt ygmrvrgfep
       61 cqsaytaraa yrvdtgnghv vvkvfrqply rlqrmlrelq ylkksgyrrm pkvlsnqsgq
      121 ywsecgkrli yltewvdgpp vslhssdlml lgralaelht vpvpveksrs sqmltrmkql
      181 endfyqrnlp svlsqhspsq rwfqshvgei relsesawta lgreeiapil eqslqqgsyl
      241 hgdvtrpnvl rrrrdvclid weqvkigcpw lelvkamant tefesrslla llrgyerirp
      301 lspaerriva alfhfpreaw laalqigsrr knlatfqvle stweqrleav ravddwsqtv
      361 pfgrrp
//
LOCUS       WP_258111585             320 aa            linear   BCT 02-MAR-2025
DEFINITION  ribonucleotide-diphosphate reductase subunit beta [Alicyclobacillus
            sp. SP_1].
ACCESSION   WP_258111585
VERSION     WP_258111585.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 320)
  AUTHORS   Nordlund,P. and Eklund,H.
  TITLE     Structure and function of the Escherichia coli ribonucleotide
            reductase protein R2
  JOURNAL   J Mol Biol 232 (1), 123-164 (1993)
   PUBMED   8331655
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012490.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00268.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..320
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /GO_process="GO:0009263 - deoxyribonucleotide biosynthetic
                     process [Evidence IEA]"
                     /calculated_mol_wt=36853
     Region          39..>254
                     /region_name="Ferritin_like"
                     /note="Ferritin-like superfamily of diiron-containing
                     four-helix-bundle proteins; cl00264"
                     /db_xref="CDD:469698"
     Site            order(89,119,122,192,227,230)
                     /site_type="other"
                     /note="dinuclear metal binding motif [ion binding]"
                     /db_xref="CDD:153097"
ORIGIN      
        1 mpeeleqigl vdievlhhqf dvdsviryvh egivpidrty pldlyrkyea qrwniseldf
       61 tqdkadwmnl tdaerdtflr vatgfhhger qvavdivpll maaprdehkm yltsqledet
      121 rhtlffdrfy revvglaatd imdtldqsyr ymsetfigsf gylayiadqi rrhpdnrkll
      181 asgitnyhlw iegvlalsva kitlnfcksq hklpgfhkgf lattrdesrh vvfgmkllke
      241 liaddpslqs vvyetvitml tmgstytqii dyspllverd dvrhimmnnl rkklnmveip
      301 ipqqldkmis avqpetaagg
//
LOCUS       WP_258111853             310 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphotransferase [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258111853
VERSION     WP_258111853.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 310)
  AUTHORS   Trower,M.K. and Clark,K.G.
  TITLE     PCR cloning of a streptomycin phosphotransferase (aphE) gene from
            Streptomyces griseus ATCC 12475
  JOURNAL   Nucleic Acids Res 18 (15), 4615 (1990)
   PUBMED   2167474
REFERENCE   2  (residues 1 to 310)
  AUTHORS   Sarwar,M. and Akhtar,M.
  TITLE     Cloning of aminoglycoside phosphotransferase (APH) gene from
            antibiotic-producing strain of Bacillus circulans into a
            high-expression vector, pKK223-3. Purification, properties and
            location of the enzyme
  JOURNAL   Biochem J 268 (3), 671-677 (1990)
   PUBMED   2163618
  REMARK    Erratum:[Biochem J 1991 Feb 1;273(3):807]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01636.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..310
                     /product="phosphotransferase"
                     /calculated_mol_wt=36268
     Region          3..269
                     /region_name="CotI"
                     /note="Spore coat protein CotI/CotS, protein kinase
                     superfamily [Cell cycle control, cell division, chromosome
                     partitioning]; COG5881"
                     /db_xref="CDD:444583"
ORIGIN      
        1 mhltefmekm ygmrvahiqp krrnvfllrt tdgtqwcvkv vqstpehlrh llqvseylqa
       61 ngfvhcplvq ydksgkayvs wrkkilfvtn wipgenphls dindwnkalq tlavfhqhav
      121 gypltlvpta kiqyhrvler vesgkqiish lshvqkkyer ffdlldvaed svkhplvqqf
      181 iererldgsf ihgdynypnl vfdthrqlhl idfdntsmqg rmmdlahllh rnaawdgprm
      241 vesistydrq rtlgktekry lftllhvpyp vlrwynmarr hgksgseggl slpsrkqlhq
      301 yaeylnsall
//
LOCUS       WP_258111882             288 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4912 domain-containing protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258111882
VERSION     WP_258111882.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027583.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16258.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..288
                     /product="DUF4912 domain-containing protein"
                     /calculated_mol_wt=33114
     Region          12..>48
                     /region_name="HTH_28"
                     /note="Helix-turn-helix domain; pfam13518"
                     /db_xref="CDD:463908"
     Region          91..204
                     /region_name="DUF4912"
                     /note="Domain of unknown function (DUF4912); pfam16258"
                     /db_xref="CDD:435240"
ORIGIN      
        1 mqkhewqqad wldvlrrleq gqsqrqvael lgvslgqlky rlrryrqavg qeessaglcs
       61 eemlgfselw qkdyqemdlw neswsrhlsg srvslwavdp hhlfaywtva dwrkqlieeh
      121 frqswmdvpv clrlndvtdl wfdgynahes vsirihpntd nwhflqiasn rnyvlelgis
      181 ldsgaffsil rsnmvhcpad ksvdavhpai efrkvweder drpdgllakh agvstrvssk
      241 pssssqvtgv igeppyapif dgysirladt srvdeetvhp vpseearp
//
LOCUS       WP_258111862             263 aa            linear   BCT 02-MAR-2025
DEFINITION  enoyl-CoA hydratase-related protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258111862
VERSION     WP_258111862.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012596.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00378.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..263
                     /product="enoyl-CoA hydratase-related protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=27765
     Region          5..263
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     Site            order(28,30,62,66..70,110,112..114,136..137,140)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(68,114)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(94,102,123..126,138..141,147,149..151,153..154,
                     159..160,162..163,165..166,169,180,183,198,201..202)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
ORIGIN      
        1 mysptedsvq lelresvayv fmnrpdklna ltmpmlrelt atigwcdase dvraivltgr
       61 grgfsagqdl savdsslpvd yeaivksgyn plveqiatsk kpviaavqgv aagaganlaf
      121 acdlvvasaq asflqsfvpi glvpdsggsw wlprlvglsk akelaffgdr ltaddarqlg
      181 lvmtvapmde feevvakvat rlaalptlai gltkqamhaa lgmdltsala aeaklqgeag
      241 rtadhqegvk aflekrkpaf rgr
//
LOCUS       WP_258111975            1128 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF499 domain-containing protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258111975
VERSION     WP_258111975.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016358.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04465.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..1128
                     /product="DUF499 domain-containing protein"
                     /calculated_mol_wt=125815
     Region          10..132
                     /region_name="HEPN_Swt1"
                     /note="Swt1-like HEPN; pfam18731"
                     /db_xref="CDD:465849"
     Region          183..1126
                     /region_name="COG1483"
                     /note="Predicted ATPase, AAA+ superfamily [General
                     function prediction only]"
                     /db_xref="CDD:441092"
ORIGIN      
        1 mesnhaqvtq gfrillgafa pyiarelgne fgkewwdvav letlyeeqrr nlpnsgdwat
       61 lvdsldiqrc lllfdlhwqk vfrkklsidh rtwakelvgv rnklahiggv dfsdddtwra
      121 ldtmsrlaeq mdsesaeeir gllrtlrygs angsttvtev svtpvgakpk nvgilsrtpi
      181 sglsswrdvi ephpdvaqgr yknaefaadl aqvargegay eyrdpveffa rtyvtegmtg
      241 lleqslrrvc gkdgepvvql ktafgggkth smlalyhmlr grvsvekipn ikpvlqragi
      301 stlpktnvav lvgtaldptk skrpnnmpgi tintlwgema aqlaesagnp slydfvkead
      361 kkgvspgsea lknlfdaaap clvlmdelva yakkiygasg lpagtfdnfi sfiqevteaa
      421 rasknslvva sipesdieig geagkialet iehtfgrmea iwkpvaaneg fevvrrrlfl
      481 dcknldarda vismfsqmya enqsdfples keleykermg scypihpevf drlyedwatl
      541 erfqrtrgvl rlmaavihel wmgndaslmi mpgsipldvp nvrdeltrhl segwnslvdr
      601 evdgknsipy qkdqstpryg sklaarrvar tvmlgsaptv rdqnvrgiea srirlgviqp
      661 geiianfnda lntlqtslay lytspsgdrf wydtrptlrk tvedratqia asdveyeies
      721 rlrglrkeqp faglhvcpas sldvpddqsa rlivlrpede ykatnelnsa mgavtdilnn
      781 rgntpriyrn mlafiapdqd lmvplkhevr rylawksvka dsedlnldaa qnretennlr
      841 rsnetvdari keaycwllvp yidknvdmkt ivwdtirisg gnesivlkaa kkmlqneaii
      901 tqwapalllm eldnvlwrds enisvkklwe ylctycylpr laseivleet irtglnstey
      961 fafasgfdgk ryidlkfnqy vgiversgcl vkisaaqkqm aeeaerrqga pgqisgdgtg
     1021 tasaggssst pypfidnggg fstaheqpea pknkhfymsa qldttrigrd vqrlveevis
     1081 hltsvdgahv evslelnvks peglsqqvvr tisencrtlk vqsfefde
//
LOCUS       WP_258112053             187 aa            linear   BCT 02-MAR-2025
DEFINITION  NYN domain-containing protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258112053
VERSION     WP_258112053.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 187)
  AUTHORS   Anantharaman,V. and Aravind,L.
  TITLE     The NYN domains: novel predicted RNAses with a PIN domain-like fold
  JOURNAL   RNA Biol 3 (1), 18-27 (2006)
   PUBMED   17114934
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014045.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01936.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..187
                     /product="NYN domain-containing protein"
                     /GO_function="GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /calculated_mol_wt=21045
     Region          2..174
                     /region_name="PIN_SF"
                     /note="PIN (PilT N terminus) domain: Superfamily; cl28905"
                     /db_xref="CDD:475124"
ORIGIN      
        1 mnrcavfmdg gyidsihkgl gspqidfvql veratencpl lrvyyynclp yqsqtpteve
       61 knlvsskqrf faavsklpyf tvregklayr ghdregrpil eqkrvdvmla tdlvmhstkh
      121 lisyaillag dsdfipavei aknegvnvhl ysvggvsarp hdelimacdr htiisreeyl
      181 aferhvg
//
LOCUS       WP_258112059             255 aa            linear   BCT 02-MAR-2025
DEFINITION  TSUP family transporter [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258112059
VERSION     WP_258112059.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 255)
  AUTHORS   Krejcik,Z., Denger,K., Weinitschke,S., Hollemeyer,K., Paces,V.,
            Cook,A.M. and Smits,T.H.
  TITLE     Sulfoacetate released during the assimilation of taurine-nitrogen
            by Neptuniibacter caesariensis: purification of sulfoacetaldehyde
            dehydrogenase
  JOURNAL   Arch Microbiol 190 (2), 159-168 (2008)
   PUBMED   18506422
REFERENCE   2  (residues 1 to 255)
  AUTHORS   Weinitschke,S., Denger,K., Cook,A.M. and Smits,T.H.M.
  TITLE     The DUF81 protein TauE in Cupriavidus necator H16, a sulfite
            exporter in the metabolism of C2 sulfonates
  JOURNAL   Microbiology (Reading) 153 (Pt 9), 3055-3060 (2007)
   PUBMED   17768248
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014035.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01925.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..255
                     /product="TSUP family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=27106
     Region          10..249
                     /region_name="DsbD"
                     /note="Cytochrome C biogenesis protein transmembrane
                     region; cl21514"
                     /db_xref="CDD:473893"
ORIGIN      
        1 mhtfwvtdsi lllfgfvaaf idssvggggl islptllllg lpptialgtn klggtmsavt
       61 sftnyartgh vhfrlirwlv pfgfvgailg atvvrhispd flrpivviml vvvaaysivr
      121 rrlgtvntyi egrkatfmga cvasallgfy dgffgpgtgs flilsflllg fdyiqasgna
      181 ksvnlasnig alltfviagd vayadgfilg agmmigaftg sqvairhgvk yirpificit
      241 famisqqlyq lfiph
//
LOCUS       WP_258112093             506 aa            linear   BCT 02-MAR-2025
DEFINITION  class I SAM-dependent methyltransferase [Alicyclobacillus sp.
            SP_1].
ACCESSION   WP_258112093
VERSION     WP_258112093.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01209.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..506
                     /product="class I SAM-dependent methyltransferase"
                     /EC_number="2.1.1.-"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=57797
     Region          245..>385
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
ORIGIN      
        1 mdketciadl ermrasglfl dpllargiyl qldddcvqav drfvhrlelr hvrlqalgdh
       61 lgqlpyspsi asrcllealv stacqvayhr sgqarpeled irvahsrtaa cllehgmacl
      121 yklyfliagy dlltplhyhr pvsedeflqg awhhpyppdg leqclmiala hgsvrykass
      181 terfertiql trigqtryew mtevlkesgy leerlemsht ylfdhaldle tlfhtlepns
      241 lryyrefvdw mdisegsqll evrcgtgtlt ydgelyrkvg ehgricavde sagllqqanr
      301 kiaavdaaeh vqlfrasvlq lpfqegvfda clgvavlqge qplsalaema rvvmpggtig
      361 llealhvnav ttafqdwfgp lfdvlkrrne sykmnilpte tqvfqwlhev glhhfetkra
      421 mttwvyesae evvqlalrai pylqreflrl pwddrrsial elidrgrdvc rrcslaertl
      481 tipmlfikar rpvgrwdarr rggaee
//
LOCUS       WP_258112096             328 aa            linear   BCT 02-MAR-2025
DEFINITION  SHOCT-like domain-containing protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258112096
VERSION     WP_258112096.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046909.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22746.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..328
                     /product="SHOCT-like domain-containing protein"
                     /calculated_mol_wt=36261
     Region          <6..28
                     /region_name="DUF2089"
                     /note="Protein of unknown function (DUF2089); cl22936"
                     /db_xref="CDD:473997"
     Region          <154..328
                     /region_name="YvlB"
                     /note="Uncharacterized conserved protein YvlB, contains
                     DUF4097 and DUF4098 domains [Function unknown]; COG3595"
                     /db_xref="CDD:442814"
ORIGIN      
        1 mnghdermkv lellesgkis aeeahrllsa lespsarrip pippvgphwn raanewksvk
       61 nqlssmvaqt vadvrrsmet qvgvwkgvep ttptaheiel pqtvrnialf vsngnvhlqp
      121 wdksyarvyi raqmrtaagd npkeylleci dtteadstys lrisdtsgkh wmsechvdvy
      181 lpqtmdrvev ksqngpvsvy gvianvldid tqnghitvqq ssvhklratt lngridlrks
      241 ienqtesvyl ttkngrievt glktvaalrg taktdcgtih isetalsaef pdgkmknvaq
      301 fmslgtavdt ertevycetk ngnihled
//
LOCUS       WP_258112254             550 aa            linear   BCT 02-MAR-2025
DEFINITION  SMP-30/gluconolactonase/LRE family protein [Alicyclobacillus sp.
            SP_1].
ACCESSION   WP_258112254
VERSION     WP_258112254.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020039.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08450.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..550
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /calculated_mol_wt=57204
     Region          <90..337
                     /region_name="NHL"
                     /note="NHL repeat unit of beta-propeller proteins;
                     cl18310"
                     /db_xref="CDD:302697"
     Region          92..137
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          145..182
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          191..252
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          261..301
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          310..337
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
ORIGIN      
        1 msrarkwtsi avaaasvagi stqvalastn sgssmqnsgt astsqsssts tasgmsahsm
       61 ammalhpvgd ianlnvnkvl sstvsangdn npyavtvnmv kgskffgqvf vsdfsnkagv
      121 ngagstivri vngkpvpftt tamgpaamaf splgplwian fgkdgtdgnv qvtkpngasf
      181 gsagtivnsa vkgpwgqafa apyatssgvk vpptffvtga engtvaamyg fspphfdttt
      241 kflvigsglp tmgtnanniq gpqgmawdam shtlyvadta dnaiyayqwy gantpnqgkg
      301 qlvyqggalk qpagltvdpv ngnllvvnqg nnhlvqlrvd wsgnkpsahv vgqvvldktp
      361 vnpktgagsa lfgvtattds agnlvvyytd dntntvnels yqptygawqk ktggflyagg
      421 lpisgfpywt atdslthqmk svvplyyiqq alkqlgihsm wngmalnlti pgnmtmasss
      481 nmpmstgssm amvqvngktv asvpklvatd wysgknttyv afnqlqqvma dlhinlqwng
      541 sslmltlqka
//
LOCUS       WP_258112267             612 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258112267
VERSION     WP_258112267.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 612)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 612)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 612)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 612)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..612
                     /product="ATP-binding protein"
                     /calculated_mol_wt=69290
     Region          <233..575
                     /region_name="KinE"
                     /note="Sporulation sensor histidine kinase E [Cell cycle
                     control, cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG5809"
                     /db_xref="CDD:444511"
ORIGIN      
        1 mritslriri alavlgglal lglsyglpes vvsvdailll talllcmfpl rfrqgyiypg
       61 plvcyillma nsslwllall lipgiyvgsq iesiesampl tlrrlftkyi rflvgfaaaf
      121 fvfhrllaha pnplryaaal vvveavqwll qtryvsrrqq fsgklhwskl psllgsnqvw
      181 pnllnffilw rvdniykdsq tlsdlvwlai pflllsaivy rleslyesrv raeeiyqmia
      241 antqdlivll trerriryls psvervfgae naksmgrywl efvdeerrrr fqhaldvcga
      301 tlepqridvy rigpehnldf ecevspvldg srqftgfvlv ardvtdrnrs feqfrksekl
      361 avighmaagv aheirnpvtt ikgflqlske rfadtpqywe imqaeilhie hiigtylsvt
      421 qspraedvsd vdvndlisqi ideldescqr qevlvtvvlp ssspilfghr lhlkralesi
      481 lqnaldampf ggqlnirlew lvperviqlt iedtgkgmde erlrylgeph yvnaergigf
      541 glllstklie ehngsldies qlgqgtkvti rlptsglsey lnqsksegsv nqgeplhaan
      601 vseavyvheq hg
//
LOCUS       WP_258112271             347 aa            linear   BCT 02-MAR-2025
DEFINITION  type I phosphomannose isomerase catalytic subunit [Alicyclobacillus
            sp. SP_1].
ACCESSION   WP_258112271
VERSION     WP_258112271.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 347)
  AUTHORS   Cleasby,A., Wonacott,A., Skarzynski,T., Hubbard,R.E., Davies,G.J.,
            Proudfoot,A.E., Bernard,A.R., Payton,M.A. and Wells,T.N.
  TITLE     The x-ray crystal structure of phosphomannose isomerase from
            Candida albicans at 1.7 angstrom resolution
  JOURNAL   Nat Struct Biol 3 (5), 470-479 (1996)
   PUBMED   8612079
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042587.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20511.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..347
                     /product="type I phosphomannose isomerase catalytic
                     subunit"
                     /GO_function="GO:0004476 - mannose-6-phosphate isomerase
                     activity [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=38465
     Region          1..342
                     /region_name="ManA"
                     /note="Mannose-6-phosphate isomerase, class I
                     [Carbohydrate transport and metabolism]; COG1482"
                     /db_xref="CDD:441091"
ORIGIN      
        1 mypvvfqpvv keriwgghql ktmfgvetdr pigeywtlad hpagsstvrn grllgrtlte
       61 ivqdhpedyl grtrakhfpl mvkfleaesn lsvqvhpgdd yasmhggdng kteawyvlra
      121 lpgakvnvgh rfanpdvfrq airegrledg leflnihsgd viyvpsgtlh allegtqvie
      181 vqqssdvtyr vydwnrvdeh gnsrdlhvdd alavlrfpen dgndvnsdha aawqrdgarv
      241 iysgpgvvhe rkvdgehfcl dtlslreagw krlreggtsp eililaegac rltansldae
      301 dfsaeervld lvpgdtvlvp atmssyhlqt pshaqfvlat ypttqhg
//
LOCUS       WP_258112284             452 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Alicyclobacillus sp.
            SP_1].
ACCESSION   WP_258112284
VERSION     WP_258112284.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 452)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 452)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..452
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=46700
     Region          44..257
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(51,91,123,244,247)
                     /site_type="active"
                     /db_xref="CDD:238141"
     Site            order(51,244,247)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238141"
     Site            order(51,91,123)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238141"
ORIGIN      
        1 mgglkkkigg lvgaacatgm lavaaappar aatmpvsavk tngqlvalgd sitfgfnlsd
       61 thqntipsad afpalmgkky hlsvtnfgsp gwtstdlvan vttpnferav sgaslitldi
      121 gsndllhfas hlgllnptti estygvtlts adeqalaavi arfkdnlvvt letlrketsa
      181 pivlytlynp fpsgigvhdv tnqiqtvvdg viesvgkafp nvyiahahsa fashqetyvd
      241 lyrddihptv lgqqvlasvg eaalaadkqp lpkshdvaqa tevgyvgqag gtmsgilgaa
      301 rtsvgysmsf pshdltksst flfsseipsa lasvapkqtk ivsdfavnfe asvkltkpyq
      361 ltlenssiqp gdevyvlsas gatkvnasvt tgkativssm pgdyvvvgpt vaavpgatkp
      421 vtgkpifmeg glallllalg atflglarkr rv
//
LOCUS       WP_258112306             715 aa            linear   BCT 02-MAR-2025
DEFINITION  prenyltransferase/squalene oxidase repeat-containing protein
            [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258112306
VERSION     WP_258112306.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 715)
  AUTHORS   Wendt,K.U., Poralla,K. and Schulz,G.E.
  TITLE     Structure and function of a squalene cyclase
  JOURNAL   Science 277 (5333), 1811-1815 (1997)
   PUBMED   9295270
REFERENCE   2  (residues 1 to 715)
  AUTHORS   Poralla,K., Hewelt,A., Prestwich,G.D., Abe,I., Reipen,I. and
            Sprenger,G.
  TITLE     A specific amino acid repeat in squalene and oxidosqualene cyclases
  JOURNAL   Trends Biochem Sci 19 (4), 157-158 (1994)
   PUBMED   8016864
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012647.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00432.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..715
                     /product="prenyltransferase/squalene oxidase
                     repeat-containing protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=79331
     Region          27..626
                     /region_name="SqhC"
                     /note="Terpene cyclase SqhC [Lipid transport and
                     metabolism]; COG1657"
                     /db_xref="CDD:441263"
ORIGIN      
        1 mdwnnnvgsg geafeslggv ledglerlva sqaqdgswqh afdtgvmpda qtaiglyllg
       61 eqawdwvrpl lvrlqamqee hggwsvypgd ggdlsttvec yyaltlwraw pvgselakcr
      121 aekfirergg lrkcrnltkt wlavggeilw relpsarwys mllrrgspir leqltiftql
      181 hivpmlllgh lryvspyaka pvltnldmhs risrrgsswt gdkdarttna rrllvrrras
      241 ercrqmiqqh qeddgtlagy hsstflwlla krawvhpdtc dvsqelcsir knclfiagef
      301 gkhqqtcnah vwntslalqa lqekslwahe ktharaidrg vayllthqhr meygggwafs
      361 snntrhpdtd dtvaaltalm pvrtshaaaw srgvqflldr qnkdggwsaf vknagksyle
      421 wipandmkra madpstadvt grvleflars qslpsahpvv argcrwllrh qeadgswygr
      481 wgtayvygtw cavralvsqt hqagvraslq valdwlmsvq redggfgesa aseclghyvp
      541 lghslptqta waldtlvala tgdldealrr aaqrsaercv lwllkhehhg qweedyptgs
      601 afagalhiry hiyrevwpli alsrfaemve sghagsvkgg eqhgasalic slslkdcqsh
      661 vlaqnpsdss lllagrlgha rgscstcrph elrieradha cgagrsrava cgaad
//
LOCUS       WP_258112338             438 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258112338
VERSION     WP_258112338.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..438
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=47884
     Region          55..372
                     /region_name="2A0115"
                     /note="benzoate transport; TIGR00895"
                     /db_xref="CDD:273327"
ORIGIN      
        1 masgvvghqg ekwtgtdgwl fwsfglgmll enyifsiapi atgwvhvpky ldslllswap
       61 iwliigiiif gpiadrygrk stfyltmgly avggiilifs ttylvllisl allllasgge
      121 mntimvashe mmpamhrgkt mmmelnfinl gaflvgilgv vssawsssha fqkgtvgvai
      181 livlfvlfla rtrtpeslrw lvrrgqtera haeavryyge eqgmirltpv qervvtapqs
      241 nrkrvslsir flvtlttafa gsagfglmty tlgpnffpkl tsliiliagg tgfisgffgl
      301 wadrlsrknl lltgylgtfl vtvliyftvg twsksiaffm illvvlnvfv nigyltedal
      361 kgevwptarr gtytaivrfi sigfyipviy isgaaslkgn milnigiwai gligalvwla
      421 kgietgkgvs ieeaslen
//
LOCUS       WP_258112322             456 aa            linear   BCT 02-MAR-2025
DEFINITION  Mu transposase C-terminal domain-containing protein
            [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258112322
VERSION     WP_258112322.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 456)
  AUTHORS   Rice,P. and Mizuuchi,K.
  TITLE     Structure of the bacteriophage Mu transposase core: a common
            structural motif for DNA transposition and retroviral integration
  JOURNAL   Cell 82 (2), 209-220 (1995)
   PUBMED   7628012
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020859.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09299.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..456
                     /product="Mu transposase C-terminal domain-containing
                     protein"
                     /calculated_mol_wt=52227
     Region          12..327
                     /region_name="transpos_IS481"
                     /note="IS481 family transposase; NF033577"
                     /db_xref="CDD:468094"
     Region          346..400
                     /region_name="Mu-transpos_C"
                     /note="Mu transposase, C-terminal; pfam09299"
                     /db_xref="CDD:430512"
ORIGIN      
        1 mtqgsreqia sfrysliapv vsrqtpltpg elgaflrevs sreydipgst srrvsvrsle
       61 rylaqyrkgg yealipkvrh dtgnmrlpet vflraaelra erpersveqi illleaegva
      121 epetvavstl arhlrqagls rrellitpqn kgtfrrfeae dvhvmwqadf qhtlylpdpd
      181 nlgkrkkail failddhsrl ivhgqfywde kmprmedslk kailrhglpe qlyvdngavf
      241 asdhlkricg rvgihlshst vrrpagrgki erlfrfidts fvpeayqaid sgyietlddl
      301 ndafqtwvng yyherkhgst gmspkqratq tarrprrise qelheifywq eerkadkagc
      361 vslqgnlfqv ddelankkiq lrydpfdltt iqvwysetry adatpvdltr rydrrvqhet
      421 etsappapgi smfealkqkq kakaeglsfa esgdvq
//
LOCUS       WP_258112367             804 aa            linear   BCT 02-MAR-2025
DEFINITION  type IV secretory system conjugative DNA transfer family protein
            [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258112367
VERSION     WP_258112367.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 804)
  AUTHORS   Lu,J., Wong,J.J., Edwards,R.A., Manchak,J., Frost,L.S. and
            Glover,J.N.
  TITLE     Structural basis of specific TraD-TraM recognition during F
            plasmid-mediated bacterial conjugation
  JOURNAL   Mol Microbiol 70 (1), 89-99 (2008)
   PUBMED   18717787
REFERENCE   2  (residues 1 to 804)
  AUTHORS   Gunton,J.E., Gilmour,M.W., Baptista,K.P., Lawley,T.D. and
            Taylor,D.E.
  TITLE     Interaction between the co-inherited TraG coupling protein and the
            TraJ membrane-associated protein of the H-plasmid conjugative DNA
            transfer system resembles chromosomal DNA translocases
  JOURNAL   Microbiology (Reading) 153 (Pt 2), 428-441 (2007)
   PUBMED   17259614
REFERENCE   3  (residues 1 to 804)
  AUTHORS   Schroder,G., Krause,S., Zechner,E.L., Traxler,B., Yeo,H.J.,
            Lurz,R., Waksman,G. and Lanka,E.
  TITLE     TraG-like proteins of DNA transfer systems and of the Helicobacter
            pylori type IV secretion system: inner membrane gate for exported
            substrates?
  JOURNAL   J Bacteriol 184 (10), 2767-2779 (2002)
   PUBMED   11976307
REFERENCE   4  (residues 1 to 804)
  AUTHORS   Dougherty,B.A., Hill,C., Weidman,J.F., Richardson,D.R., Venter,J.C.
            and Ross,R.P.
  TITLE     Sequence and analysis of the 60 kb conjugative,
            bacteriocin-producing plasmid pMRC01 from Lactococcus lactis
            DPC3147
  JOURNAL   Mol Microbiol 29 (4), 1029-1038 (1998)
   PUBMED   9767571
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014581.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02534.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..804
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=89623
     Region          196..634
                     /region_name="VirD4"
                     /note="Type IV secretory pathway, VirD4 component,
                     TraG/TraD family ATPase [Intracellular trafficking,
                     secretion, and vesicular transport]; COG3505"
                     /db_xref="CDD:442728"
     Region          774..799
                     /region_name="Nudix_N_2"
                     /note="Nudix N-terminal; pfam14803"
                     /db_xref="CDD:464323"
ORIGIN      
        1 mhapvivppt vllgwvtrpw frwlligggl ygvyryvyri vgygytalvl gagvfcgfgv
       61 fevhrdlahw qrtlrpttta pypalsgtkg slmhtvlvqp smpslngfsp lakenpwiva
      121 ialvlgaigl lgyllyrglp atvtakwrqr llegkavpar wsqghdgayp ispielgihk
      181 dtgkpirieg kdrfintavl gsigtgktsr illkavyqdl vamsqgwpmd vivlepdgef
      241 aeqtirqaka fgietdiidl rsgedeadhp ywestvsftp fggstladti dnvraalqek
      301 mgkqegffqn aqdallrsvl qiqvslwpdt dfaqfadlit dilhfrsicq mihdyttqtt
      361 ggrkkseald ewsaaweyer teietrlakl pdsvqkmvst aarsflmdtr sdqkidqlek
      421 itqglkivvg eiaynprlqr vfrtsqlpil dlkkflnpve drparvlvlv tgnqpagklf
      481 gklflvtlkm malrrkgden trrpvylyvd efavygteay aemfsqarky rvgqmvayqv
      541 raqlldvskk fqdvvegscr nkvyfpapsp edagfleksl gslakvreth senrlgffgf
      601 dnrtldrkvs rtetvdprfr lenilyglqa neaifvmteq nqakapvvgq tsyatdwlkq
      661 naptrskpkr rprqstsekp tqtntfdrvs iaalreaaat asedapnasc aplpspnrge
      721 tqatptskvp svpskkdetp tatppslvgt aervkrthlh kramevtpgt npicpacgqp
      781 lrleeretkq kwvcpacgfe rkkr
//
LOCUS       WP_258112387             432 aa            linear   BCT 02-MAR-2025
DEFINITION  nuclease domain-containing protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258112387
VERSION     WP_258112387.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 432)
  AUTHORS   Knizewski,L., Kinch,L.N., Grishin,N.V., Rychlewski,L. and
            Ginalski,K.
  TITLE     Realm of PD-(D/E)XK nuclease superfamily revisited: detection of
            novel families with modified transitive meta profile searches
  JOURNAL   BMC Struct Biol 7, 40 (2007)
   PUBMED   17584917
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016309.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04411.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..432
                     /product="nuclease domain-containing protein"
                     /calculated_mol_wt=49890
     Region          <2..311
                     /region_name="AQ645"
                     /note="Predicted anti-virus defense system component
                     AQ645, contains DUF2357 and PD-(D/E)xK nuclease domains
                     [Defense mechanisms]; COG1700"
                     /db_xref="CDD:441306"
ORIGIN      
        1 mleawlkfdl aarlvwhggq dvygggkrdv atlyeywvff qlldlvklef nldipsvdel
       61 iettkdgfgl klrsgkklev egnyasatrp lrvrfsynrt fvrhgnends tsypypgswt
      121 rrmrpdytfs fwpealteaq aerqelivhi hfdakyrvdn ieglfgadtd devneeksaq
      181 rnngtykrad llkmhayrda irrtqgayil ypgtedyrwn gfhevlpsig afslrpgden
      241 egvqhihsfl kdvldhlsdr vsrrekqsfh tfmiqekpsa yalkanipet egtrralppd
      301 ehhivvcgft dldqfetitr thtyylkcse ldgefqinpy vffakhilll gfsdekaqgl
      361 wkvtapkpkf vvgsklegrp dsdgmylaie iekderfdhl swdrarmcvs egefeprvmt
      421 ladlmhsqne ts
//
LOCUS       WP_258112453             330 aa            linear   BCT 02-MAR-2025
DEFINITION  metal ABC transporter solute-binding protein, Zn/Mn family
            [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258112453
VERSION     WP_258112453.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 330)
  AUTHORS   Ilari,A., Alaleona,F., Tria,G., Petrarca,P., Battistoni,A.,
            Zamparelli,C., Verzili,D., Falconi,M. and Chiancone,E.
  TITLE     The Salmonella enterica ZinT structure, zinc affinity and
            interaction with the high-affinity uptake protein ZnuA provide
            insight into the management of periplasmic zinc
  JOURNAL   Biochim Biophys Acta 1840 (1), 535-544 (2014)
   PUBMED   24128931
REFERENCE   2  (residues 1 to 330)
  AUTHORS   Gabbianelli,R., Scotti,R., Ammendola,S., Petrarca,P., Nicolini,L.
            and Battistoni,A.
  TITLE     Role of ZnuABC and ZinT in Escherichia coli O157:H7 zinc
            acquisition and interaction with epithelial cells
  JOURNAL   BMC Microbiol 11, 36 (2011)
   PUBMED   21338480
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 330)
  AUTHORS   Lee,Y.H., Deka,R.K., Norgard,M.V., Radolf,J.D. and Hasemann,C.A.
  TITLE     Treponema pallidum TroA is a periplasmic zinc-binding protein with
            a helical backbone
  JOURNAL   Nat Struct Biol 6 (7), 628-633 (1999)
   PUBMED   10404217
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013465.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01297.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..330
                     /product="metal ABC transporter solute-binding protein,
                     Zn/Mn family"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=35833
     Region          58..321
                     /region_name="TroA-like"
                     /note="Helical backbone metal receptor (TroA-like domain).
                     These proteins have been shown to function in the ABC
                     transport of ferric siderophores and metal ions such as
                     Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is
                     formed in the interface between...; cl00262"
                     /db_xref="CDD:469696"
     Site            order(123..124,127,170)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238347"
ORIGIN      
        1 mttpftkspf wkhslptfaa vglilaaavg cgsapaelns shssttpatk ltnsstvira
       61 vgaeneyanv isqiggpyvq vtaimsnpnt dphtfeaspq vanvissakl ivqnglgydt
      121 fmsklesasq npartvidvq hlldlpdstp nphlwyspst mpvvataien rlsqlqpahk
      181 ayfqanlqrf lhslqpwnaa italkaqypg apvattepva ddmlnaaglk netpwtfqad
      241 vmngtdpspq tveiqkklft ehrvkvflyn qqvvdpltns llllakqnni pvvgvyetmp
      301 pnenyqtwml revqdvqaal qdhkstetmn
//
LOCUS       WP_258112528             412 aa            linear   BCT 02-MAR-2025
DEFINITION  YCF48-related protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258112528
VERSION     WP_258112528.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 412)
  AUTHORS   Rengstl,B., Oster,U., Stengel,A. and Nickelsen,J.
  TITLE     An intermediate membrane subfraction in cyanobacteria is involved
            in an assembly network for Photosystem II biogenesis
  JOURNAL   J Biol Chem 286 (24), 21944-21951 (2011)
   PUBMED   21531723
REFERENCE   2  (residues 1 to 412)
  AUTHORS   Komenda,J., Nickelsen,J., Tichy,M., Prasil,O., Eichacker,L.A. and
            Nixon,P.J.
  TITLE     The cyanobacterial homologue of HCF136/YCF48 is a component of an
            early photosystem II assembly complex and is important for both the
            efficient assembly and repair of photosystem II in Synechocystis
            sp. PCC 6803
  JOURNAL   J Biol Chem 283 (33), 22390-22399 (2008)
   PUBMED   18550538
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026220.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14870.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..412
                     /product="YCF48-related protein"
                     /calculated_mol_wt=46375
     Region          161..>303
                     /region_name="PRK13684"
                     /note="photosynthesis system II assembly factor Ycf48"
                     /db_xref="CDD:237468"
     Region          287..>399
                     /region_name="COG4447"
                     /note="Uncharacterized conserved protein related to plant
                     photosystem II stability/assembly factor [General function
                     prediction only]"
                     /db_xref="CDD:443546"
ORIGIN      
        1 mqkrlwgvsa aalaltcltv tgcgvsvhpl rseheaqntv rdfvkeakil klqlignqgf
       61 svveityrgq ryiciatspn egriwyiskn smiptylmwp ldapispnev afhflnsssg
      121 wflveeknsi eilktnnegk kwiehkirmn arstsagnif vdfnnmqngw ilvssnpalq
      181 lvssslystn dggttwtklh aknipfsgks tgitfinknt gfltknypdt spniplyttl
      241 dsgqnwtkah vklpfdkksf lysnayppvf fsqsnglflv tfmqthgtra avytttdggh
      301 qwnpgrasli kvnmsgsris dyflnpnigw mlseggylwi itdygqkwtr iahfnnlkni
      361 ksapqmyftn rldgwilfqt stqtdlyqsd dggvswhrih wkvrldspqs pa
//
LOCUS       WP_258112595             592 aa            linear   BCT 02-MAR-2025
DEFINITION  hydantoinase B/oxoprolinase family protein [Alicyclobacillus sp.
            SP_1].
ACCESSION   WP_258112595
VERSION     WP_258112595.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 592)
  AUTHORS   Watabe,K., Ishikawa,T., Mukohara,Y. and Nakamura,H.
  TITLE     Cloning and sequencing of the genes involved in the conversion of
            5-substituted hydantoins to the corresponding L-amino acids from
            the native plasmid of Pseudomonas sp. strain NS671
  JOURNAL   J Bacteriol 174 (3), 962-969 (1992)
   PUBMED   1732229
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10000641
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..592
                     /product="hydantoinase B/oxoprolinase family protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=64930
     Region          1..556
                     /region_name="HyuB"
                     /note="N-methylhydantoinase B/oxoprolinase/acetone
                     carboxylase, alpha subunit [Amino acid transport and
                     metabolism, Secondary metabolites biosynthesis, transport
                     and catabolism]; COG0146"
                     /db_xref="CDD:439916"
ORIGIN      
        1 mamdsitvdi venalknikd emdvtlfrsa mspvireqhd cfpmitdvhg qmvvgnfgsh
       61 vpeviahfpe gvaegdvifl sdpyscggsi shindwmiii piffssrlvg yasmfghvmd
      121 vggpvpaslp vtatsifgeg vrfppvklye rgklndavlr iiqantrtpl enysdlmalv
      181 aacrtaekrv velcarfgpd tyqealdell artnrmmrql iqgflpeqpv sfedyvdddg
      241 lgngpfkmkl siwregdqaf fdwtgtdpqa qgpisyylsd amfkmfigaf lisvfdpaim
      301 fndgfydllh vttpegsllr pnfpaalgcr thvlsrlfdv lsgalslntp enspaagygt
      361 spyfiysgtd adgrdyhlme vmygglpgrp igdgldghsw wpafvnipte yletyyplrv
      421 eyyrtgmdsg gaglhrggnc neklytclad glvsihddra klqpwgingg epgtssykil
      481 irsdgtvehl pskldgvevh kgdqvlfvtg gsggfgdple rhpdrvradv arglvsrdka
      541 aksygvvfkp gttevdevat edlrrdlret rgelaafqfg nrdvvasssd tm
//
LOCUS       WP_258112659             129 aa            linear   BCT 02-MAR-2025
DEFINITION  DEAD/DEAH box helicase family protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258112659
VERSION     WP_258112659.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04851.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..129
                     /product="DEAD/DEAH box helicase family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=14191
     Region          9..>126
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(32..38,120)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
ORIGIN      
        1 mghaltlspy qaeavdaffa etcrrqlmvl ptgagktilf gaiakrwwea sdqtrpilil
       61 ahrserldpa eqkltmvwpe avvgrvqgsr neplgnvlva stqtlvlgra irppgliiyd
      121 echhsgrff
//
LOCUS       WP_258112697             332 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidylprolyl isomerase [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258112697
VERSION     WP_258112697.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025002.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13616.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..332
                     /product="peptidylprolyl isomerase"
                     /EC_number="5.2.1.8"
                     /calculated_mol_wt=36137
     Region          1..324
                     /region_name="prsA"
                     /note="peptidylprolyl isomerase; Provisional; PRK00059"
                     /db_xref="CDD:234605"
ORIGIN      
        1 mpskgklita asilaavmmv agcgtgqgtt htaknkaaat lnlpvsqhys gpvvatyngg
       61 kltkeeftqq ynlqvvlpkm taqesktqfl qsyvlfykym ygkavasdkt pvnvaqakql
      121 tdqylkqlvg qqyktqadld kemktlgvtk adyitlaekg qvlqdylqql lknvkvsdad
      181 aksyynahkl dylqvtvsei llktkaqant iiaelkkddg knfaalanky sqdpgvktnh
      241 gtyansmagq fvphfaeaca tlpigkiggp vktrygyfam rvdarkqlpf sqvessikqq
      301 llqpaqnake qsiiaaakka ldmkmtvkaa dl
//
LOCUS       WP_258112797             482 aa            linear   BCT 02-MAR-2025
DEFINITION  helicase-related protein, partial [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258112797
VERSION     WP_258112797.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012493.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00271.37
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         <1..482
                     /product="helicase-related protein"
     Region          <100..336
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
ORIGIN      
        1 plcgprfrit rgntnsyhpk ltalgamlad gmdhrslnkf vrrygtmeqk grwatddvkt
       61 ggtmserkvl lnppkevpgl sptlfvqhla dkcvflelgd lglplvelee rpvfvrmdpd
      121 heqaygtfhv dleaemkrqy algntkafaq fipavvnaan qpyrsqtvwl seedavafaa
      181 tqlesawtpk erqlvsdvqa eleqgrrcvv yvrysgdalq dkrvtavlqq agiraetlsa
      241 tvapedrvaw lerslergvd vvvcnaklve vgldllshps lffyqftdei atmrqaarra
      301 wrigqhrpck vfyylyqgty emaqmsrmla krshamlleg rldrsevaef takdaqsast
      361 yaiahclgdv adlssqwram adkdipqgvt llseerfrge igramqrlae etkrmagvsp
      421 seespcltlq dtsvsvsvaq kaplpmepev tlgewkkrlp dkakkvlkkq gvgddqlllf
      481 al
//
LOCUS       WP_258112855             422 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258112855
VERSION     WP_258112855.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..422
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=45452
     Region          22..410
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(32..33,36..37,40,73,123..124,126..128,131,150,
                     153..154,157,245,248..249,252..254,257,284,288,338..339,
                     343,347,363,366..367,370..371,374)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340887"
ORIGIN      
        1 mkgsrarefg vrhkkreipa vlwmlalasl invgglsllw pvnsiyihvr llqsmstvgw
       61 vlmvysgsgf vgsliggwly drvgptwtla gssvlaaavi vipaldtsfv vyigvmatfg
      121 lfcaipfpvl naiashawpe ggrrafnfly vsnnigvaig taigglvaaa sfqavffgic
      181 igylvfvglt ltlfrrpflq ayragrqqrs attdsvlhig ddgdvqnelh apipwgavll
      241 vlmgflcaws vyvqwqstls vdmqalrypl aaysilwtmn galiflgqpi itwvvrrlpv
      301 ltlhmlvgvc lyvfafglll vshayiafva amilttfgem fawpsvpaav snlappskag
      361 llqglvggaa tlgrmigply ggylydaggi hsvllfacsf lsmplllfiv fhfltkrivv
      421 vv
//
LOCUS       WP_258112989             467 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail sheath C-terminal domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_258112989
VERSION     WP_258112989.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 467)
  AUTHORS   Aksyuk,A.A., Kurochkina,L.P., Fokine,A., Forouhar,F.,
            Mesyanzhinov,V.V., Tong,L. and Rossmann,M.G.
  TITLE     Structural conservation of the myoviridae phage tail sheath protein
            fold
  JOURNAL   Structure 19 (12), 1885-1894 (2011)
   PUBMED   22153511
REFERENCE   2  (residues 1 to 467)
  AUTHORS   Xue,Q. and Egan,J.B.
  TITLE     Tail sheath and tail tube genes of the temperate coliphage 186
  JOURNAL   Virology 212 (1), 218-221 (1995)
   PUBMED   7676633
REFERENCE   3  (residues 1 to 467)
  AUTHORS   Temple,L.M., Forsburg,S.L., Calendar,R. and Christie,G.E.
  TITLE     Nucleotide sequence of the genes encoding the major tail sheath and
            tail tube proteins of bacteriophage P2
  JOURNAL   Virology 181 (1), 353-358 (1991)
   PUBMED   1825255
REFERENCE   4  (residues 1 to 467)
  AUTHORS   Arisaka,F., Ishimoto,L., Kassavetis,G., Kumazaki,T. and Ishii,S.
  TITLE     Nucleotide sequence of the tail tube structural gene of
            bacteriophage T4
  JOURNAL   J Virol 62 (3), 882-886 (1988)
   PUBMED   2963141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037565.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17482.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..467
                     /product="phage tail sheath C-terminal domain-containing
                     protein"
     Region          85..459
                     /region_name="Phage_sheath_1"
                     /note="Phage tail sheath protein subtilisin-like domain;
                     cl01389"
                     /db_xref="CDD:470182"
ORIGIN      
        1 ttietaiigv vgtapqaaga vaatltagtp lldneltfta kaggrsgnti tviaeqavke
       61 ksagavptsa kwengsllit lgcsekgagn asvsdvvtav ngvagagvra tgsgdgvvsp
      121 fsgtlsgged epfplntpva magttalsrl gsagtlkqal teindqrnal svivrveekt
      181 kpeeqraail agismlssak svttyqpriv iapgfsedda vgkaletvag klravayvdc
      241 aagatlqevv qrrqsygart ellrprvqvs naegqlvyrp ysafaaglra ridyekgwww
      301 sksnqevyni lgveqvdefi lgerncdanl lnmqnvstli rragfkhwgn rlcsshpqwh
      361 fesvrrtadv iedsiqeaml ayvdrpldrq naddiigtin aymrrlvaeg aifggrawld
      421 pelntaetla agelyinydf gpksptelis mrvsvnneyg ikemtat
//
LOCUS       WP_258112993             355 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: glycoside hydrolase family 113 [Bacillus cereus
            group].
ACCESSION   WP_258112993
VERSION     WP_258112993.1
KEYWORDS    RefSeq.
SOURCE      Bacillus cereus group
  ORGANISM  Bacillus cereus group
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 355)
  AUTHORS   Lin,H.Y., Chen,C.Y., Lin,T.C., Yeh,L.F., Hsieh,W.C., Gao,S.,
            Burnouf,P.A., Chen,B.M., Hsieh,T.J., Dashnyam,P., Kuo,Y.H., Tu,Z.,
            Roffler,S.R. and Lin,C.H.
  TITLE     Entropy-driven binding of gut bacterial beta-glucuronidase
            inhibitors ameliorates irinotecan-induced toxicity
  JOURNAL   Commun Biol 4 (1), 280 (2021)
   PUBMED   33664385
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 355)
  AUTHORS   Bardy,P., Fuzik,T., Hrebik,D., Pantucek,R., Thomas Beatty,J. and
            Plevka,P.
  TITLE     Structure and mechanism of DNA delivery of a gene transfer agent
  JOURNAL   Nat Commun 11 (1), 3034 (2020)
   PUBMED   32541663
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 355)
  AUTHORS   You,X., Qin,Z., Yan,Q., Yang,S., Li,Y. and Jiang,Z.
  TITLE     Structural insights into the catalytic mechanism of a novel
            glycoside hydrolase family 113 beta-1,4-mannanase from
            Amphibacillus xylanus
  JOURNAL   J Biol Chem 293 (30), 11746-11757 (2018)
   PUBMED   29871927
REFERENCE   4  (residues 1 to 355)
  AUTHORS   Williams,R.J., Iglesias-Fernandez,J., Stepper,J., Jackson,A.,
            Thompson,A.J., Lowe,E.C., White,J.M., Gilbert,H.J., Rovira,C.,
            Davies,G.J. and Williams,S.J.
  TITLE     Combined inhibitor free-energy landscape and structural analysis
            reports on the mannosidase conformational coordinate
  JOURNAL   Angew Chem Int Ed Engl 53 (4), 1087-1091 (2014)
   PUBMED   24339341
REFERENCE   5  (residues 1 to 355)
  AUTHORS   Zhang,Y., Ju,J., Peng,H., Gao,F., Zhou,C., Zeng,Y., Xue,Y., Li,Y.,
            Henrissat,B., Gao,G.F. and Ma,Y.
  TITLE     Biochemical and structural characterization of the intracellular
            mannanase AaManA of Alicyclobacillus acidocaldarius reveals a novel
            glycoside hydrolase family belonging to clan GH-A
  JOURNAL   J Biol Chem 283 (46), 31551-31558 (2008)
   PUBMED   18755688
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046780.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22612.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Bacillus cereus group"
                     /db_xref="taxon:86661"
     Protein         1..355
                     /product="glycoside hydrolase family 113"
                     /GO_function="GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /calculated_mol_wt=40781
     Region          36..353
                     /region_name="GH113-like"
                     /note="Glycoside hydrolase family 113 beta-mannosidase and
                     similar proteins; cl16298"
                     /db_xref="CDD:449734"
     Site            order(113,119..120,162,193,228,277,327..328,338)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:381624"
ORIGIN      
        1 mkknkslisf lgvfimlfsf cfqgnvqadv ntvqsgkiks gnvtvwevgn vakvladver
       61 lnlntvnvpi qvdipnvtst nmvinqaqkq qaiiliqell krniqvivep fpyiqqgnvg
      121 etewnpsnin dffwnwktvi lqdifnsits kynvyglkia snfvnmeyae gywsdtidfv
      181 rnqykgnvly qmnwwltasw dpsyeakfke kinrsylkkv divsidswfe vsgkrnptye
      241 evkqslfatt vynrgqnvvq qleqlhnatg kpvyfggfnv parelglqnp wnpdvsnvfs
      301 kdvqlngwra yrdvlepkpy fkgfsiwfig sndsthayqi hskaaetvin gwyrk
//
LOCUS       WP_258112636             286 aa            linear   BCT 02-MAR-2025
DEFINITION  LppP/LprE family lipoprotein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258112636
VERSION     WP_258112636.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 286)
  AUTHORS   Rezwan,M., Grau,T., Tschumi,A. and Sander,P.
  TITLE     Lipoprotein synthesis in mycobacteria
  JOURNAL   Microbiology (Reading) 153 (Pt 3), 652-658 (2007)
   PUBMED   17322184
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025407.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14041.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..286
                     /product="LppP/LprE family lipoprotein"
                     /calculated_mol_wt=30922
     Region          180..258
                     /region_name="Lipoprotein_21"
                     /note="LppP/LprE lipoprotein; pfam14041"
                     /db_xref="CDD:433666"
ORIGIN      
        1 mrytrrllal ftvavagaga vqwmqapvaw aastpsrevp advvflngha llhsahvvsh
       61 attyfpetdv mtvlanlnvp hhyehfrlsv dgayttsaeq vgtvfylpiw yvmqalhrig
      121 desqwnghaw siqaklpvlh gpsasavhav mastseiqdt gedfsetskp iltpdgqggt
      181 lsavvgtrnp tadglgqilf ffhnntwvgl nshaeatqik svipdgaeaf qvtyvnyasn
      241 dpmyapnlpp vtviyrwekg rmvpsrelpk gvlngltvht vgtpak
//
LOCUS       WP_258113008             158 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase gpA endonuclease subunit, partial [Escherichia coli].
ACCESSION   WP_258113008
VERSION     WP_258113008.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 158)
  AUTHORS   Ortiz,D., delToro,D., Ordyan,M., Pajak,J., Sippy,J., Catala,A.,
            Oh,C.S., Vu,A., Arya,G., Feiss,M., Smith,D.E. and Catalano,C.E.
  TITLE     Evidence that a catalytic glutamate and an 'Arginine Toggle' act in
            concert to mediate ATP hydrolysis and mechanochemical coupling in a
            viral DNA packaging motor
  JOURNAL   Nucleic Acids Res 47 (3), 1404-1415 (2019)
   PUBMED   30541105
REFERENCE   2  (residues 1 to 158)
  AUTHORS   delToro,D., Ortiz,D., Ordyan,M., Sippy,J., Oh,C.S., Keller,N.,
            Feiss,M., Catalano,C.E. and Smith,D.E.
  TITLE     Walker-A Motif Acts to Coordinate ATP Hydrolysis with Motor Output
            in Viral DNA Packaging
  JOURNAL   J Mol Biol 428 (13), 2709-2729 (2016)
   PUBMED   27139643
REFERENCE   3  (residues 1 to 158)
  AUTHORS   Andrews,B.T. and Catalano,C.E.
  TITLE     The enzymology of a viral genome packaging motor is influenced by
            the assembly state of the motor subunits
  JOURNAL   Biochemistry 51 (46), 9342-9353 (2012)
   PUBMED   23134123
REFERENCE   4  (residues 1 to 158)
  AUTHORS   Ortega,M.E., Gaussier,H. and Catalano,C.E.
  TITLE     The DNA maturation domain of gpA, the DNA packaging motor protein
            of bacteriophage lambda, contains an ATPase site associated with
            endonuclease activity
  JOURNAL   J Mol Biol 373 (4), 851-865 (2007)
   PUBMED   17870092
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042573.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20454.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>158
                     /product="terminase gpA endonuclease subunit"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
     Region          <1..>158
                     /region_name="gpA1"
                     /note="Phage terminase, large subunit GpA [Mobilome:
                     prophages, transposons]; COG5525"
                     /db_xref="CDD:444276"
ORIGIN      
        1 kpetvyylce hngcvirqse ldqtdgrwic dntgmwtrdg lafysagdee mppprsityh
       61 vwtayspftt wvqivydwld alkdpngvkt finttlgepy eeavaeklsf elllekvchy
      121 gaqvplrvvy ltagidsqkd ryeiyvwgwa pgeeafli
//
LOCUS       WP_258113009             158 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase gpA endonuclease subunit, partial [Escherichia coli].
ACCESSION   WP_258113009
VERSION     WP_258113009.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 158)
  AUTHORS   Ortiz,D., delToro,D., Ordyan,M., Pajak,J., Sippy,J., Catala,A.,
            Oh,C.S., Vu,A., Arya,G., Feiss,M., Smith,D.E. and Catalano,C.E.
  TITLE     Evidence that a catalytic glutamate and an 'Arginine Toggle' act in
            concert to mediate ATP hydrolysis and mechanochemical coupling in a
            viral DNA packaging motor
  JOURNAL   Nucleic Acids Res 47 (3), 1404-1415 (2019)
   PUBMED   30541105
REFERENCE   2  (residues 1 to 158)
  AUTHORS   delToro,D., Ortiz,D., Ordyan,M., Sippy,J., Oh,C.S., Keller,N.,
            Feiss,M., Catalano,C.E. and Smith,D.E.
  TITLE     Walker-A Motif Acts to Coordinate ATP Hydrolysis with Motor Output
            in Viral DNA Packaging
  JOURNAL   J Mol Biol 428 (13), 2709-2729 (2016)
   PUBMED   27139643
REFERENCE   3  (residues 1 to 158)
  AUTHORS   Andrews,B.T. and Catalano,C.E.
  TITLE     The enzymology of a viral genome packaging motor is influenced by
            the assembly state of the motor subunits
  JOURNAL   Biochemistry 51 (46), 9342-9353 (2012)
   PUBMED   23134123
REFERENCE   4  (residues 1 to 158)
  AUTHORS   Ortega,M.E., Gaussier,H. and Catalano,C.E.
  TITLE     The DNA maturation domain of gpA, the DNA packaging motor protein
            of bacteriophage lambda, contains an ATPase site associated with
            endonuclease activity
  JOURNAL   J Mol Biol 373 (4), 851-865 (2007)
   PUBMED   17870092
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042573.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20454.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>158
                     /product="terminase gpA endonuclease subunit"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
     Region          <1..>158
                     /region_name="gpA1"
                     /note="Phage terminase, large subunit GpA [Mobilome:
                     prophages, transposons]; COG5525"
                     /db_xref="CDD:444276"
ORIGIN      
        1 kpetvyylce hngcvirqse ldqtdgrwic dntgmwtrdg ltfysagdee mppprsisyh
       61 iwtayspftt wvqivydwld alkdpngvkt finttlgepy eeavaeklsf elllekvchy
      121 gaqvplrvvy ltagidsqkd ryeiyvwgwa pgeeafli
//
LOCUS       WP_258113082             467 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: amino acid permease [Bacillus cereus group].
ACCESSION   WP_258113082
VERSION     WP_258113082.1
KEYWORDS    RefSeq.
SOURCE      Bacillus cereus group
  ORGANISM  Bacillus cereus group
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Bacillus cereus group"
                     /db_xref="taxon:86661"
     Protein         1..467
                     /product="amino acid permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=49987
     Region          18..448
                     /region_name="2A0306"
                     /note="amino acid transporter; TIGR00909"
                     /db_xref="CDD:129987"
ORIGIN      
        1 mksllrkkal stespkqlar tltaldltfl gigavigtgi fvltgivaak hsgpgimlsf
       61 liaaftcacv afcyaefass ipvsgsvyty aymtvgevva fivgwclmle yllavaavav
      121 gwsgylqsll qgfnihlpai iasapgvgkg glidlpavci lllitgllsf giresarinn
      181 imvliklavi itfivagaky vkpenwtpfi pfgydgiitg aatvffaflg fdaiataaee
      241 tkkpqrdlpi giigsllict vlymivsfvl tgmvpytqld vsdpvafalh fvgedaiagl
      301 lavgamtgmt tvllvvmygq vrvsyamsrd gllpkalarv nkkvkiplln twitgvvaal
      361 laglldlhll anlvnigtlt aftfvccavl ilrkahpdlk rgfrtpfvpv lpvvailccl
      421 ylminlsktt wisfavwliv glcfyffysr khshlaiekt ndeqkka
//
LOCUS       WP_258113138             740 aa            linear   BCT 02-MAR-2025
DEFINITION  M60 family metallopeptidase [Bacillus thuringiensis].
ACCESSION   WP_258113138
VERSION     WP_258113138.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 740)
  AUTHORS   Nakjang,S., Ndeh,D.A., Wipat,A., Bolam,D.N. and Hirt,R.P.
  TITLE     A novel extracellular metallopeptidase domain shared by animal
            host-associated mutualistic and pathogenic microbes
  JOURNAL   PLoS One 7 (1), e30287 (2012)
   PUBMED   22299034
REFERENCE   2  (residues 1 to 740)
  AUTHORS   Galloway,C.S., Wang,P., Winstanley,D. and Jones,I.M.
  TITLE     Comparison of the bacterial Enhancin-like proteins from Yersinia
            and Bacillus spp. with a baculovirus Enhancin
  JOURNAL   J Invertebr Pathol 90 (2), 134-137 (2005)
   PUBMED   16081094
REFERENCE   3  (residues 1 to 740)
  AUTHORS   Wang,P. and Granados,R.R.
  TITLE     An intestinal mucin is the target substrate for a baculovirus
            enhancin
  JOURNAL   Proc Natl Acad Sci U S A 94 (13), 6977-6982 (1997)
   PUBMED   9192677
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13402.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         1..740
                     /product="M60 family metallopeptidase"
                     /calculated_mol_wt=83425
     Region          82..149
                     /region_name="M60-like_N"
                     /note="N-terminal domain of M60-like peptidases;
                     pfam17291"
                     /db_xref="CDD:435844"
     Region          169..425
                     /region_name="Peptidase_M60"
                     /note="Peptidase M60, enhancin and enhancin-like;
                     pfam13402"
                     /db_xref="CDD:433178"
     Region          470..584
                     /region_name="Mucin_bdg"
                     /note="Putative mucin or carbohydrate-binding module;
                     pfam03272"
                     /db_xref="CDD:460871"
     Region          598..>677
                     /region_name="COG3979"
                     /note="Chitodextrinase [Carbohydrate transport and
                     metabolism]"
                     /db_xref="CDD:443178"
     Region          694..>715
                     /region_name="ChiC_BD"
                     /note="Chitin-binding domain of chitinase C; cd12215"
                     /db_xref="CDD:213178"
ORIGIN      
        1 mgnklkhktk rilvatatlt iissgmasss dvfaeetqqq knlstspqse ksvksenrtf
       61 tvpgkgdvev lkqqerksma fspyeptgly akpneqitin vegnqdiqvy igtysydasw
      121 redskiksft lkpgvntiqs pnggliyfyn kqqggtirtt ittggtttpf felgkhtkqd
      181 linmldqypn ahavelkger vlitasparv kkyllgsntd pvqllkkmde atriqdkvag
      241 lseeqvdkhy vhyveenhsp dyymyatsyr tayvgdaiqy vldinkfvtd gwgpwheagh
      301 lrqqvpwkfy nmgevqnniy slsvekafnq psnleksgty tkafqyleqt nknydeisda
      361 fvklvmlwql qlaygedfyp klhqlyrdms snelpqtden kkqlfmisas kvakqnlipf
      421 fekwglhpnn dtiqkvtalg ypiltaeiwr gtdsnpnsln vlegsqfaws lkgigdfefa
      481 kvnlnkstee mqidlkagvp hnyfdstyas ikvqntsgkv vynkeiygnk qqnaeqakvp
      541 vkvgdyielt hlegvhrati tnvekgiqes fgnkvvyeit keglkkvdki vnpepdteap
      601 tqpqglyasn ltsnsvelkw npstdnigvk eyqvlrdgql iqtvqgttfi dqnltankey
      661 kyavkavdaa gntsiqseil pvktkdqnvs yekwdskkay tkgdkvehqg tvyeavqnhq
      721 gngdpnwifa lslwkpltik
//
LOCUS       WP_258113309             748 aa            linear   BCT 02-MAR-2025
DEFINITION  ESPR-type extended signal peptide-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_258113309
VERSION     WP_258113309.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 748)
  AUTHORS   Leyton,D.L., Rossiter,A.E. and Henderson,I.R.
  TITLE     From self sufficiency to dependence: mechanisms and factors
            important for autotransporter biogenesis
  JOURNAL   Nat Rev Microbiol 10 (3), 213-225 (2012)
   PUBMED   22337167
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 748)
  AUTHORS   Desvaux,M., Scott-Tucker,A., Turner,S.M., Cooper,L.M., Huber,D.,
            Nataro,J.P. and Henderson,I.R.
  TITLE     A conserved extended signal peptide region directs
            posttranslational protein translocation via a novel mechanism
  JOURNAL   Microbiology (Reading) 153 (Pt 1), 59-70 (2007)
   PUBMED   17185535
REFERENCE   3  (residues 1 to 748)
  AUTHORS   Desvaux,M., Cooper,L.M., Filenko,N.A., Scott-Tucker,A.,
            Turner,S.M., Cole,J.A. and Henderson,I.R.
  TITLE     The unusual extended signal peptide region of the type V secretion
            system is phylogenetically restricted
  JOURNAL   FEMS Microbiol Lett 264 (1), 22-30 (2006)
   PUBMED   17020545
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024418.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13018.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>748
                     /product="ESPR-type extended signal peptide-containing
                     protein"
     Region          1..>694
                     /region_name="auto_AIDA-I"
                     /note="autotransporter adhesin AIDA-I; NF033176"
                     /db_xref="CDD:380183"
ORIGIN      
        1 mnkiynivwn essgmwvvts eltrkggqrh rkikrtmlag liaglmlptv palaqvfnde
       61 ildysssmsl sagdsafntt idggeqyvss ggsaisttin dgaqiifngg tastttingg
      121 yqdissggsv tntlisggdq yisdggsatn tvidggtqyi ssggnaiett iengfqevsn
      181 ggsatstvin agfqnissgg satstiinag fqdvsnggsa tsttinggvq lissggsavd
      241 ttiqsgiqev geggsasgtt innsgiqfis sggsatatti nsggwqeiss ggsatetain
      301 ggiqwiydgg sasdstinsg yqvissggsv tsttiyrgge qsihnaglat gtiisggeql
      361 vssggsavdt tiegglqtil nggnvsgtli sggeqrvssg gsavdttiee glqtvlnggn
      421 vsgthisgge qnissggsav dttievglqt vfdggsvngt iidggeqhis sggsainttl
      481 dgyqtvfngg natgttingg fqnissggsa tstiinagfq evssggsats ttinagfqal
      541 ydssiasgtv inngfqliss ggsainttik ggfqevsdgg raiettitsg wqnvlsggva
      601 tetlivggvq tiydggsase itinsgyqvi ssggsvtttt iyrggeqsit naglatgtii
      661 rggeqrvssg gsavdttieg glqtvfsggs vsgtlintge qqvssggsav dttiegglqt
      721 vfgggsvsgt lintgeqqvs sggsavdt
//
LOCUS       WP_258113315             274 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4047 domain-containing protein [Bacillus thuringiensis].
ACCESSION   WP_258113315
VERSION     WP_258113315.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024653.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13256.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         1..274
                     /product="DUF4047 domain-containing protein"
                     /calculated_mol_wt=32168
     Region          28..152
                     /region_name="DUF4047"
                     /note="Domain of unknown function (DUF4047); pfam13256"
                     /db_xref="CDD:315838"
     Region          <184..>274
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
ORIGIN      
        1 mlkrprnfkk mlilpcmcsi tfylgsqimt hteaafihet kveatlstai ifpktvntlk
       61 eqsekhkqfi ereygtmkgk skatsieeik qaisvwqhgr ekivaekeal qnvyteieap
      121 ynqiqeelkv nkdesmqqvs iyvnegfrsi kekrdyieke islkaideqi qalqqqlnva
      181 ieaegqkkae eqkkaeeqkk aeeqkkveeq kkveeqkkve eqkkveeqkk veeqkkveeq
      241 kkveeqkkie eqkkieeqkk aeeqkkieeq kkae
//
LOCUS       WP_258113328            1620 aa            linear   BCT 02-MAR-2025
DEFINITION  zincin-like metallopeptidase toxin domain-containing protein
            [Escherichia coli].
ACCESSION   WP_258113328
VERSION     WP_258113328.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 1620)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026976.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15640.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1620
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..1620
                     /product="zincin-like metallopeptidase toxin
                     domain-containing protein"
                     /calculated_mol_wt=180455
     Region          <252..305
                     /region_name="PAAR_RHS"
                     /note="proline-alanine-alanine-arginine (PAAR) domain,
                     also containing C-terminal Rearrangement hotspot (Rhs)
                     extensions; cd14742"
                     /db_xref="CDD:269827"
     Region          393..465
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
     Region          553..593
                     /region_name="YD_repeat_2x"
                     /note="YD repeat (two copies); TIGR01643"
                     /db_xref="CDD:273728"
     Region          <592..1470
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
     Region          1485..1613
                     /region_name="Tox-MPTase4"
                     /note="Metallopeptidase toxin 4; pfam15640"
                     /db_xref="CDD:406148"
ORIGIN      
        1 msegpggpqg ataggtlamr mlsqqamvas qmkraandka iaqmlaskks gppaarlgde
       61 iqhksflgal agavlgaivt iaegclimaa catgpyalvl vpalmyasyk asdyveekqn
      121 qleswinsfc dtdgaintgs envkingela araavtlppp pppgaipevp qgepswgdia
      181 tdllesaaek avplakawgn avitltdsna gfmdrvsaga sllfpagpvl mefatmvggr
      241 geikkevdfp eagedtalcd kenkppriaq gssnvfinnq paarkgdkle csaaivggsp
      301 dvfiggeqvt yldiqpefpp wqrmilggit iasyllppag llgklknlar lgklgnllgk
      361 sgkllgaklg allgktgksl ksiankvirw vtdpvdpvtg aycdertdft lgqtlplsft
      421 rfhssvlplh gltgvgwsds wseyawvreq gnrvdiisqg atlrfafdgd sdttvnpyha
      481 qyilrrrddy lelfdrdals srffydafpg mrlrhpvtdd tsddrlahsp ndrmymlggm
      541 sdtasnritf erdsqyritg vshtdgirlk ltyhasgylk aihrtdngiq tlatyeqdar
      601 grlteadarl dyhlfyeyda adriirwsdn dqtwsrftyd eqgrcvnvtg aegyynatld
      661 ygdgcttvtd gkgthryyyd pdgnilreea pdgstttyew defhhllarh spagrvekfe
      721 ynaalgqlsr ytaadgaewl yryderglls nitdpagqtw tqqcderglp vslvspqgee
      781 trlaytaqgl lsgifrqder rlgieydhhn rpetltdvmg rehhteysgh dlpvkmrgpg
      841 gqsvrlqwqq hhklsgiera gtgaegfryd rhgnllaytd gngvvwtmey gpfdlpvart
      901 dgeghrwqyr ydkdtlqlte vinpqgesyr yildncgrvt eerdwggvvw ryrydadglc
      961 tarvngleet ilysrdaagr laevitpegk tqyaydksgr ltgifspdgt sqrtgyderg
     1021 rvnvttqgrr aieyhypdeh tvirciqppe derdrhpdes llkttyryna ageltevilp
     1081 gdetltfsrd eagrevlrhs nrgfaceqgw naasqlvtqr agffpaeatw gglvpslvre
     1141 yrydsagnvs gvtsredygr etrreyrldr ngqvtavtas gtglgygegd esygydscgy
     1201 lkaqsagrhr iseetdqyag ghrlkqagnt qydydaagrm vsrtkhrdgy rpeterfrwd
     1261 sldqltgycs aqgeqweyry dasgrrtekr cgrkkirfty lwdgdsiaei reyrddklys
     1321 vrhlvfngfe lisqqfsrvr qphpsvapqw vtrtnhavsd ltgrplmlfn segktvwrpg
     1381 qtslwglals lpadtgypdp rgeldpeadp gllyagqwqd aesglcynrf ryyepetgmy
     1441 lvsdplgllg geqtyryvpn pcgwvdplrl aasskisslm dyigdgrrvs ghtgfldgvr
     1501 lsrsqinnia kemeklgikv irkadkylpp naraafdygl rniylrknat lyevyhevih
     1561 akqfakigre ayealgrlsr eehvlneilk sknlfneaei ahaikyvegl rekfmmgltn
//
LOCUS       WP_258113353             345 aa            linear   BCT 02-MAR-2025
DEFINITION  BclA C-terminal domain-containing protein [Bacillus thuringiensis].
ACCESSION   WP_258113353
VERSION     WP_258113353.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 345)
  AUTHORS   Kirchdoerfer,R.N., Herrin,B.R., Han,B.W., Turnbough,C.L. Jr.,
            Cooper,M.D. and Wilson,I.A.
  TITLE     Variable lymphocyte receptor recognition of the immunodominant
            glycoprotein of Bacillus anthracis spores
  JOURNAL   Structure 20 (3), 479-486 (2012)
   PUBMED   22405006
REFERENCE   2  (residues 1 to 345)
  AUTHORS   Liu,C.Q., Nuttall,S.D., Tran,H., Wilkins,M., Streltsov,V.A. and
            Alderton,M.R.
  TITLE     Construction, crystal structure and application of a recombinant
            protein that lacks the collagen-like region of BclA from Bacillus
            anthracis spores
  JOURNAL   Biotechnol Bioeng 99 (4), 774-782 (2008)
   PUBMED   17879302
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18573.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         1..345
                     /product="BclA C-terminal domain-containing protein"
                     /calculated_mol_wt=31842
     Region          216..345
                     /region_name="BclA_C"
                     /note="BclA C-terminal domain; pfam18573"
                     /db_xref="CDD:436587"
ORIGIN      
        1 mskfkkhcch ipfplpqigp tgitgptgit gatgpsggpp gptgptgitg atgpsggppg
       61 ptgptgitga tgpsggppgp tgptgitgat gpsggppgpt gptgitgatg psggppgptg
      121 ptgitgatgp sggppgptgp tgitgatgps ggppgptgpt gitgatgpsg gptgptgitg
      181 atgpsggppg ptgitgptgp tgpsglttsg lsqyayvfnt aaqvvaleap ilfnshgrit
      241 sgfthtlgts qmtvinagdy kisfsvsgve pnqfalflng apvtnsiyga gagtqqnngq
      301 tiltlaagdi ltlnnhtsaa avtlqtlagg tqtnvnasit iekln
//
LOCUS       WP_258112997             291 aa            linear   BCT 02-MAR-2025
DEFINITION  phage terminase large subunit family protein, partial [Escherichia
            coli].
ACCESSION   WP_258112997
VERSION     WP_258112997.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 291)
  AUTHORS   Ortiz,D., delToro,D., Ordyan,M., Pajak,J., Sippy,J., Catala,A.,
            Oh,C.S., Vu,A., Arya,G., Feiss,M., Smith,D.E. and Catalano,C.E.
  TITLE     Evidence that a catalytic glutamate and an 'Arginine Toggle' act in
            concert to mediate ATP hydrolysis and mechanochemical coupling in a
            viral DNA packaging motor
  JOURNAL   Nucleic Acids Res 47 (3), 1404-1415 (2019)
   PUBMED   30541105
REFERENCE   2  (residues 1 to 291)
  AUTHORS   Andrews,B.T. and Catalano,C.E.
  TITLE     The enzymology of a viral genome packaging motor is influenced by
            the assembly state of the motor subunits
  JOURNAL   Biochemistry 51 (46), 9342-9353 (2012)
   PUBMED   23134123
REFERENCE   3  (residues 1 to 291)
  AUTHORS   Ortega,M.E., Gaussier,H. and Catalano,C.E.
  TITLE     The DNA maturation domain of gpA, the DNA packaging motor protein
            of bacteriophage lambda, contains an ATPase site associated with
            endonuclease activity
  JOURNAL   J Mol Biol 373 (4), 851-865 (2007)
   PUBMED   17870092
REFERENCE   4  (residues 1 to 291)
  AUTHORS   Duffy,C. and Feiss,M.
  TITLE     The large subunit of bacteriophage lambda's terminase plays a role
            in DNA translocation and packaging termination
  JOURNAL   J Mol Biol 316 (3), 547-561 (2002)
   PUBMED   11866517
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017673.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05876.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>291
                     /product="phage terminase large subunit family protein"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
     Region          18..>288
                     /region_name="gpA1"
                     /note="Phage terminase, large subunit GpA [Mobilome:
                     prophages, transposons]; COG5525"
                     /db_xref="CDD:444276"
ORIGIN      
        1 misdaqkaan aagaiatgll slnipvpltt vqwadqhyyl pkessytpgq wetlpfqvai
       61 mnsmgndrir tvnliksarv gytkmllgve ayfiehksrn sllfqptdsa aedfmkshve
      121 ptirdvpall elapwfgrkh rdntltlkrf ssgvgfwclg gaaaknyrek svdvvcydel
      181 ssfepdveke gsptllgdkr iegsvwpksi rgstpkikgs cqiekaanes ahfmrfyvpc
      241 phcgeaqylk fgddatpsgl kwekgkpetv yylcehngcv irqseldqtd g
//
LOCUS       WP_258113458             266 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma 54-interacting transcriptional regulator, partial
            [Escherichia coli].
ACCESSION   WP_258113458
VERSION     WP_258113458.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 266)
  AUTHORS   Studholme,D.J. and Dixon,R.
  TITLE     Domain architectures of sigma54-dependent transcriptional
            activators
  JOURNAL   J Bacteriol 185 (6), 1757-1767 (2003)
   PUBMED   12618438
REFERENCE   2  (residues 1 to 266)
  AUTHORS   Chaney,M., Grande,R., Wigneshweraraj,S.R., Cannon,W., Casaz,P.,
            Gallegos,M.T., Schumacher,J., Jones,S., Elderkin,S., Dago,A.E.,
            Morett,E. and Buck,M.
  TITLE     Binding of transcriptional activators to sigma 54 in the presence
            of the transition state analog ADP-aluminum fluoride: insights into
            activator mechanochemical action
  JOURNAL   Genes Dev 15 (17), 2282-2294 (2001)
   PUBMED   11544185
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00158.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..266
                     /product="sigma 54-interacting transcriptional regulator"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008134 - transcription factor binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
     Region          <26..263
                     /region_name="RocR"
                     /note="RocR-type transcriptional regulator, contains PAS,
                     AAA-type ATPase, and DNA-binding Fis domains
                     [Transcription, Signal transduction mechanisms]; COG3829"
                     /db_xref="CDD:443041"
ORIGIN      
        1 drnrshwsts ktpsytksvs wqhhrasang ktgliqaant gtlfldeigd mplmlqakll
       61 raieareilp igasspiqvd iriisatnqn laqfiaegkf redlfyrlnv ipitlpplre
      121 rqediellvh yflhlhtrrl gsvypgiapd vveilrkhrw pgnlrelsnl meylvnvvps
      181 gevidstllp pnllnngtte qsdvtevtea hlslddaggt aleemekqmi realsrhnsk
      241 kqvadelgig iptlyrkikk yellnt
//
LOCUS       WP_258113477             473 aa            linear   BCT 02-MAR-2025
DEFINITION  LysM peptidoglycan-binding domain-containing protein [Aerococcus
            urinae].
ACCESSION   WP_258113477
VERSION     WP_258113477.1
KEYWORDS    RefSeq.
SOURCE      Aerococcus urinae
  ORGANISM  Aerococcus urinae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Aerococcaceae; Aerococcus.
REFERENCE   1  (residues 1 to 473)
  AUTHORS   Bateman,A. and Bycroft,M.
  TITLE     The structure of a LysM domain from E. coli membrane-bound lytic
            murein transglycosylase D (MltD)
  JOURNAL   J Mol Biol 299 (4), 1113-1119 (2000)
   PUBMED   10843862
REFERENCE   2  (residues 1 to 473)
  AUTHORS   Joris,B., Englebert,S., Chu,C.P., Kariyama,R., Daneo-Moore,L.,
            Shockman,G.D. and Ghuysen,J.M.
  TITLE     Modular design of the Enterococcus hirae muramidase-2 and
            Streptococcus faecalis autolysin
  JOURNAL   FEMS Microbiol Lett 70 (3), 257-264 (1992)
   PUBMED   1352512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01476.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Aerococcus urinae"
                     /db_xref="taxon:1376"
     Protein         1..473
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=48891
     Region          <28..152
                     /region_name="PRK06347"
                     /note="1,4-beta-N-acetylmuramoylhydrolase"
                     /db_xref="CDD:180536"
     Region          <75..>233
                     /region_name="PRK13914"
                     /note="invasion associated endopeptidase"
                     /db_xref="CDD:237555"
     Region          345..473
                     /region_name="COG3942"
                     /note="Surface antigen [Cell wall/membrane/envelope
                     biogenesis]"
                     /db_xref="CDD:443142"
ORIGIN      
        1 mkktkkimlg tsvltsaala aviapnvdaa eytikvgdtl selalqfntt ieelrdgnni
       61 edvnlifage tldvpsaetp qvsnkkevka ekpapaaktt tsqtsdangv ytvvagdtln
      121 kiaaefntta qairdlnglr gdliligqql qvkvalqesp apvaeyqatp qdqvveekia
      181 yelpevtane ghveesaspv eapatpevae aevapkaevv eaevaspapa kevkaeaavd
      241 aeaaqakeaa ekaqaeqaqa qaakeaeaqk aaqaqaeqaa keaeaqkaaq aakeaeaqka
      301 aqaakeaeeq kaaeaakqae iekaqlqaqt yqaantqvqa qpvstnnatv lsaydgsvdp
      361 rglapagqct yyvinrlhal gkpvpgpmgn anqwaytasn hgipvsnkpt vgsvvsfpag
      421 vagasgyghv afvegvnpdg sirisemnfg gspnvtyrtv dagsaaassy ihf
//
LOCUS       WP_258113502            1860 aa            linear   BCT 02-MAR-2025
DEFINITION  tape measure protein [Aerococcus urinae].
ACCESSION   WP_258113502
VERSION     WP_258113502.1
KEYWORDS    RefSeq.
SOURCE      Aerococcus urinae
  ORGANISM  Aerococcus urinae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Aerococcaceae; Aerococcus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040129.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20155.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1860
                     /organism="Aerococcus urinae"
                     /db_xref="taxon:1376"
     Protein         1..1860
                     /product="tape measure protein"
                     /calculated_mol_wt=192138
     Region          482..673
                     /region_name="TMP_3"
                     /note="Tape measure protein; pfam20155"
                     /db_xref="CDD:466312"
     Region          776..1237
                     /region_name="COG5412"
                     /note="Phage-related protein [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:444167"
     Region          <1239..1781
                     /region_name="COG5412"
                     /note="Phage-related protein [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:444167"
ORIGIN      
        1 mafsgniday igadtsayes amarvssatn qafqkakqya nanssqlaqi vantiakles
       61 gsiskfkaig qgvfdavkip lgklqglasr iglkipepiq kgfqmmvsga rtafstllsi
      121 sgngikgyig afksanqaik ngigfvadai gnklsngfsk lsiaankaat ylpgpfktaa
      181 snianifndl avktdslsgr manairnggi vpafnyvsqs iknvlakgit gatnvvansl
      241 dkiafaaiks aqhlptpfqa aaqkiasifv slessvrssg ermansiang tlvsavhsig
      301 qkirsglvna vnsatntvaq sfdrialagf raadrlpapf qnslmristl fvglevktrs
      361 igeriaqsia gtslgravsr fqsafsaits kagtmasnvk skleslvsva tsvssriass
      421 lengftslgs katnalsris ahfakgssga rafgssvkel ftafslanla skamsvltqs
      481 fssavsrfdt lkqfpkimqs wgysaddasa atkrlsegid glpttldeit nstksfvvag
      541 ldlntaadaa iafndamlan gastseaang mtqlnqmlav gkvdqqawns ltiasgkaln
      601 dvaqemlgag knsrdlyeal ksgevtmddf vqkmiemdka tggfaeqalk gsegvktsig
      661 ilqsavvrgm aniisafdsv leskglpnia qsiarlkapi dnvfnsisna vptvvegfqr
      721 lgkagtmalm afptvaplal sslgnmgngl ksilsvgnnv srglmkgilg yqqvvgdtiv
      781 khdglfksfw klgqgvgglk gtfiqtagtg isalggmtsa itsiasvala sigpaailgl
      841 vvaglglinn afgdqisqml ttvtqkgpev iarftqgivs aipqliqsgt qliaqfaqal
      901 aanipaivqa gvqiiaalvn gigsnsgsli ssalmvitsf vtsilsalpq lvsigmqfll
      961 qltqgilqni pqiissaqti vmgfvnsvva nlptiistgi niinnlitgl vqllpqliqi
     1021 gaqaimvliq giisnlplim agavsivsnl vngiltalpq listagqlis tflngiiaal
     1081 ptilsggiqi vmalvsgiiq nlpsiltaag qlilsfmggl iefaaqlita gvalvvftiq
     1141 gilsalgeli sagleaaqnf vnglksmslg eliqigwdwi kslfqgaida lsnfvgglid
     1201 kctnvwdsik svftggssev ntqvstdfsq tatnvessta qmansatnna naaqqaiena
     1261 sslanmngsm nfeemmqnvs nstgqmasma gsnanlttdg ilgasgqant lgsqdyqdla
     1321 nnantsltqm tqniqtqlnq qkatvteftt slttsisqaf teigttssta laslsegist
     1381 slqtvsttvt tqmqtittti qngftqintv astslasfgt siatslqsvt sivtsqmqai
     1441 lmaiqsgfmq intiaasslg nfgtlvassf qqaiaviqsq mmamvtvvqs afaqmqavsv
     1501 salagmsaai isqfsqqtaa vqaqlatmva svqssfaqis siansafagm tativaqmaa
     1561 qtsavssaas amvstvqsaf sqigsistsa lnnmssavts afsrisnais tamnqvnnti
     1621 sqtfnrvvsi tqqsmnrvqs itqqafnrmr stiqsagqqm rstwqsamhg mvsvtsssln
     1681 qaraltastm ssivsimhsa aagarsagan tgwgfysgla gtagsiysla asiasnvast
     1741 lrsalsihsp srvtrgigsy tgegfylgmg dwlgkvkqms kdyadavvnr nfesnalmva
     1801 tgkvvdsgvi nqlddmqrqi dsadlsdnqi vvhnelvgdr iytsvetirg rkenkdkyfn
//
LOCUS       WP_258113514            1509 aa            linear   BCT 02-MAR-2025
DEFINITION  Cna B-type domain-containing protein [Aerococcus urinae].
ACCESSION   WP_258113514
VERSION     WP_258113514.1
KEYWORDS    RefSeq.
SOURCE      Aerococcus urinae
  ORGANISM  Aerococcus urinae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Aerococcaceae; Aerococcus.
REFERENCE   1  (residues 1 to 1509)
  AUTHORS   Deivanayagam,C.C., Rich,R.L., Carson,M., Owens,R.T., Danthuluri,S.,
            Bice,T., Hook,M. and Narayana,S.V.
  TITLE     Novel fold and assembly of the repetitive B region of the
            Staphylococcus aureus collagen-binding surface protein
  JOURNAL   Structure 8 (1), 67-78 (2000)
   PUBMED   10673425
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017548.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05738.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Aerococcus urinae"
                     /db_xref="taxon:1376"
     Protein         1..1509
                     /product="Cna B-type domain-containing protein"
                     /calculated_mol_wt=168359
     Region          42..>448
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          192..288
                     /region_name="Big_8"
                     /note="Bacterial Ig domain; pfam17961"
                     /db_xref="CDD:465589"
     Region          <406..>596
                     /region_name="ClfA"
                     /note="Clumping factor A-related surface protein, MSCRAMM
                     (microbial surface components recognizing adhesive matrix
                     molecules) family, DEv-IgG fold [Cell
                     wall/membrane/envelope biogenesis]; COG4932"
                     /db_xref="CDD:443959"
     Region          570..656
                     /region_name="Cna_B"
                     /note="Cna protein B-type domain; pfam05738"
                     /db_xref="CDD:461726"
     Region          665..767
                     /region_name="CollagenBindB"
                     /note="Repeat unit of collagen-binding protein domain B;
                     cd00222"
                     /db_xref="CDD:212461"
     Site            order(666,668,670,695..696,712,714,716,731,733,735,738,
                     743,745..746)
                     /site_type="other"
                     /note="domain interaction interfaces [polypeptide
                     binding]"
                     /db_xref="CDD:212461"
     Region          781..883
                     /region_name="CollagenBindB"
                     /note="Repeat unit of collagen-binding protein domain B;
                     cd00222"
                     /db_xref="CDD:212461"
     Site            order(782,784,786,811..812,828,830,832,847,849,851,854,
                     868,870..871)
                     /site_type="other"
                     /note="domain interaction interfaces [polypeptide
                     binding]"
                     /db_xref="CDD:212461"
     Region          897..999
                     /region_name="CollagenBindB"
                     /note="Repeat unit of collagen-binding protein domain B;
                     cd00222"
                     /db_xref="CDD:212461"
     Site            order(898,900,902,927..928,944,946,948,963,965,967,970,
                     984,986..987)
                     /site_type="other"
                     /note="domain interaction interfaces [polypeptide
                     binding]"
                     /db_xref="CDD:212461"
     Region          1013..1115
                     /region_name="CollagenBindB"
                     /note="Repeat unit of collagen-binding protein domain B;
                     cd00222"
                     /db_xref="CDD:212461"
     Site            order(1014,1016,1018,1043..1044,1060,1062,1064,1079,1081,
                     1083,1086,1100,1102..1103)
                     /site_type="other"
                     /note="domain interaction interfaces [polypeptide
                     binding]"
                     /db_xref="CDD:212461"
     Region          1129..1231
                     /region_name="CollagenBindB"
                     /note="Repeat unit of collagen-binding protein domain B;
                     cd00222"
                     /db_xref="CDD:212461"
     Site            order(1130,1132,1134,1159..1160,1176,1178,1180,1195,1197,
                     1199,1202,1216,1218..1219)
                     /site_type="other"
                     /note="domain interaction interfaces [polypeptide
                     binding]"
                     /db_xref="CDD:212461"
     Region          1245..1347
                     /region_name="CollagenBindB"
                     /note="Repeat unit of collagen-binding protein domain B;
                     cd00222"
                     /db_xref="CDD:212461"
     Site            order(1246,1248,1250,1275..1276,1292,1294,1296,1311,1313,
                     1315,1318,1332,1334..1335)
                     /site_type="other"
                     /note="domain interaction interfaces [polypeptide
                     binding]"
                     /db_xref="CDD:212461"
     Region          <1352..>1433
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          <1379..1509
                     /region_name="PRK09418"
                     /note="bifunctional 2',3'-cyclic-nucleotide
                     2'-phosphodiesterase/3'-nucleotidase"
                     /db_xref="CDD:236504"
ORIGIN      
        1 mkkgftalll aiamlifsfm ptrveakelg ppianqevma inevngqdkv tpspeahkev
       61 nsiekkdtts qvagqkkegg dqapatlken tqavqattra sdgahainsr ateeerpstk
      121 rlqdqlvkee evpkpiekpa qasttteevr adklpdqavd vglrsapthh ddvikgvrvt
      181 kangqkvnsa yqwmtikvnm dfqlpdntik agdtttiqlp kelvfketpn rfgvkdstga
      241 vvargyvnpq nktltlsytd yvekhsgikg tlffstrvdh sqekkaknip lnfrignqli
      301 fagnirwqga vkakyyplqk dawksrlgnn iiqyriavnr kgqdiyngai sddlvsekve
      361 hiknslrvym gkwqwndkks dfdfnhgvnv tshvkiiwge nnkafkihfg rlrpdqglmi
      421 tyraqidyqa ldgeviknyv rltgdginne egisryryls aggkaqgyvy qmklvkldqa
      481 dpnktlagak frlvrnrtga ligeyetnqa geiviknllr ddytlkesqa pvgyqldpsp
      541 iavgaedfdn peklaiksit nkkieeklsi pvtklwigkm lkevtvflka dgekiqegki
      601 svdtfwmhtf enlakfkpdg spieytveea pvagyrtdir qkvagdvsrg fiitnkeips
      661 liprreikvt kawlnsqges lnapvdklev elyrdgqatg kkvtlsvenh wtgafknlpv
      721 yesienpkay eysvrevged kgsiqvnghw fkvtyqgtmk dgftilnqet ptwtpmspps
      781 revkvtktwl naqaealkap idklevelyr dgqatgnklf lsaenhwags fkdlpvyesv
      841 enpkayeysv revgevkrsi qvnghwfkvt yqgtmkdgft ilnqetptwt pmtppsrevk
      901 vtktwlnaqg ealeapidkf evelyrdgqa tgkkltlsve nhwigafknl pvyesientk
      961 vyeysikevg eakgsiqvag kwfkvsyqgt mkdgfnvlnq etpawtpmtp psrevkvtka
     1021 wvnaqgesls vpvdklevel yrdgqatgkk ltlsaenqws gafknlpvye sienpkayay
     1081 sikevgeakg siqvagkwfk vsyqgtmkdg ftilnqetpi wtpmtppire lkvtktwlnt
     1141 egeslnapve klevelyrdg qatgkkltls venhwsgafk nlpvyesven pkvyeysvke
     1201 vgeekgsiqv agkwfkvsyq gtmkdgftil nqetptwtpm tpptrelkvt ktwlntqges
     1261 lsapvdniqv elyrdgqatg kkltlsvenh wtgafkdlpv yqsientkay aysikevgea
     1321 kgeiqiagqc fkvtysgtmk dgfkvvnqay ppeepqtppd kpkkpetppv tppdkpkkpe
     1381 tppvtppdkp kkpetppvtp pdkpkkpetp pvtppdkakk petppvtpsd kakkveippm
     1441 tstkvvplag npsqateksl pahkqahkea glpktgvdse tqdwlalgvg avfvgclfaw
     1501 lgknnkskr
//
LOCUS       WP_258112404             116 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Alicyclobacillus sp. SP_1].
ACCESSION   WP_258112404
VERSION     WP_258112404.1
KEYWORDS    RefSeq.
SOURCE      Alicyclobacillus sp. SP_1
  ORGANISM  Alicyclobacillus sp. SP_1
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Alicyclobacillaceae; Alicyclobacillus.
REFERENCE   1  (residues 1 to 116)
  AUTHORS   Moore,T.C. and Escalante-Semerena,J.C.
  TITLE     The EutQ and EutP proteins are novel acetate kinases involved in
            ethanolamine catabolism: physiological implications for the
            function of the ethanolamine metabolosome in Salmonella enterica
  JOURNAL   Mol Microbiol 99 (3), 497-511 (2016)
   PUBMED   26448059
REFERENCE   2  (residues 1 to 116)
  AUTHORS   Pitts,A.C., Tuck,L.R., Faulds-Pain,A., Lewis,R.J. and
            Marles-Wright,J.
  TITLE     Structural insight into the Clostridium difficile ethanolamine
            utilisation microcompartment
  JOURNAL   PLoS One 7 (10), e48360 (2012)
   PUBMED   23144756
REFERENCE   3  (residues 1 to 116)
  AUTHORS   Serventi,F., Ramazzina,I., Lamberto,I., Puggioni,V., Gatti,R. and
            Percudani,R.
  TITLE     Chemical basis of nitrogen recovery through the ureide pathway:
            formation and hydrolysis of S-ureidoglycine in plants and bacteria
  JOURNAL   ACS Chem Biol 5 (2), 203-214 (2010)
   PUBMED   20038185
REFERENCE   4  (residues 1 to 116)
  AUTHORS   Werner,A.K., Romeis,T. and Witte,C.P.
  TITLE     Ureide catabolism in Arabidopsis thaliana and Escherichia coli
  JOURNAL   Nat Chem Biol 6 (1), 19-21 (2010)
   PUBMED   19935661
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017690.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05899.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Alicyclobacillus sp. SP_1"
                     /db_xref="taxon:2942475"
     Protein         1..116
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=13104
     Region          <17..112
                     /region_name="EutQ"
                     /note="Ethanolamine utilization protein EutQ, cupin
                     superfamily (function unknown) [Amino acid transport and
                     metabolism]; COG4766"
                     /db_xref="CDD:443798"
ORIGIN      
        1 mehlvhiihg ndiqfedmgv dgdlaeiasp ihklsktmgg gicrmkksaf ewqlhydeai
       61 yvisgsmyig yegekiqava gdiyfmkdga kitygtdeev efffsmypvn wkelqk
//
LOCUS       WP_258113653             944 aa            linear   BCT 02-MAR-2025
DEFINITION  C39 family peptidase [Lacticaseibacillus paracasei].
ACCESSION   WP_258113653
VERSION     WP_258113653.1
KEYWORDS    RefSeq.
SOURCE      Lacticaseibacillus paracasei
  ORGANISM  Lacticaseibacillus paracasei
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024919.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13529.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..944
                     /organism="Lacticaseibacillus paracasei"
                     /db_xref="taxon:1597"
     Protein         1..944
                     /product="C39 family peptidase"
                     /calculated_mol_wt=102112
     Region          636..938
                     /region_name="YvpB"
                     /note="Predicted cysteine peptidase, C39 family [General
                     function prediction only]; COG4990"
                     /db_xref="CDD:444014"
ORIGIN      
        1 mrkakiirtr qvvsplltll aavalsgvtt vhasdntdkt pavnesvqss atsqqeqaaa
       61 tdrkagtlsd ddleklidrs datptqdilk mkdgvpsdqq eawltvakrv adqdlstshr
      121 eqvilynetk ivvpapkaaa psaesdasnq asnasaqnps saassaaass ssssaaasss
      181 sqskpeaapa kneaasaaat papvtdnryv svtdknavly adlngtkkqe gaavyqrtfk
      241 sqakyqkdgv tylalydanq tlqgymnqas ikvaagaggv wtnasgyasl tkpgqdiygn
      301 ldtkqvikks ddvldntyfi sgayhhldgq vyyslydshn nwlgymagsg fetvnsaega
      361 waaasgyakv vdknyaiyns fkfdatgstd hyyqqyfkkv gqyhhvngav yysvfdlfgh
      421 wlgyvnsaav qnvtianpeg twqaddryvt vtdnratlys dfnwtkkqaa tdvmlqtfks
      481 tgkyhnlngl tylslydkdg nwrgyinqqs itagvsdgga wlpanayttf taanvnayad
      541 fnqqkvatsg aglvnqtvni sgqyhafggv vyysiydvrg kwlgyvdasq vkttssaagl
      601 wlphdgyltt tqsgqmiytn ldsfaggrtt tanyqrtfri mgeykhynga tyyslydgsg
      661 nwmgylnsal gseskeaqgv wmnynanvli tasnaalyss ffnmtrdtss lyggvyqvsg
      721 kyshvngtty yslydgnrwl gylaswatvp yelrflnvpy vsqfrpimap dgcapaalsm
      781 alqavgvnps lsylmnnlpm agsvpggqag siygggfqyv itpaaltvya qnwdknarni
      841 sgasttqiia evvtghpvly ygfspyqksg dynrnhchvi agfdpnrgfe imdpgyntqf
      901 dragsaggns rfdhgpvywi slssfeseya hqygseavkr aiaf
//
LOCUS       WP_258113409              97 aa            linear   BCT 02-MAR-2025
DEFINITION  phage anti-RecBCD protein [Escherichia coli].
ACCESSION   WP_258113409
VERSION     WP_258113409.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 97)
  AUTHORS   Murphy,K.C.
  TITLE     Bacteriophage P22 Abc2 protein binds to RecC increases the 5'
            strand nicking activity of RecBCD and together with lambda bet,
            promotes Chi-independent recombination
  JOURNAL   J Mol Biol 296 (2), 385-401 (2000)
   PUBMED   10669596
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022496.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11043.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..97
                     /product="phage anti-RecBCD protein"
                     /calculated_mol_wt=11541
     Region          1..97
                     /region_name="Anti-RecBCD_p2"
                     /note="Bacteriophage P22, anti-RecBCD protein 2;
                     pfam11043"
                     /db_xref="CDD:287956"
ORIGIN      
        1 mpaplygadd arrcsgnsvs evldkfrkny drimslpqet keekefryci wlaekeerer
       61 iyqtsirpfr katythfpei dprlrnyrsr ygaisnd
//
LOCUS       WP_258113775             300 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase [Lacticaseibacillus paracasei].
ACCESSION   WP_258113775
VERSION     WP_258113775.1
KEYWORDS    RefSeq.
SOURCE      Lacticaseibacillus paracasei
  ORGANISM  Lacticaseibacillus paracasei
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06028.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Lacticaseibacillus paracasei"
                     /db_xref="taxon:1597"
     Protein         1..300
                     /product="alpha/beta hydrolase"
                     /calculated_mol_wt=32992
     Region          20..273
                     /region_name="COG4814"
                     /note="Uncharacterized conserved protein with an
                     alpha/beta hydrolase fold [Function unknown]"
                     /db_xref="CDD:443842"
ORIGIN      
        1 mikhwrkwll llvsvlavta itlpatswme qnvksarvvh nsrmqpiili pgssatedrf
       61 ntlitqlnaq ttghsllkit vktngtltys gkiaardtep yivvafennk dgynnikkqa
      121 awfniafkql aktynfnrfr gighsnggli ftlflekyys dsdvrmtrlm tigtpynlee
      181 snpdnrtqml ndlitsrnkl pssltvysia gtenldgdgt vpiesveagk yifqnqvahy
      241 tqitvsgdea ghsslpqnrq ivnlisqymv atpnqqgirp gqggsgrgvg qapgdtgqnp
//
LOCUS       WP_258113776             454 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Lacticaseibacillus paracasei].
ACCESSION   WP_258113776
VERSION     WP_258113776.1
KEYWORDS    RefSeq.
SOURCE      Lacticaseibacillus paracasei
  ORGANISM  Lacticaseibacillus paracasei
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (residues 1 to 454)
  AUTHORS   Mande,S.S., Sarfaty,S., Allen,M.D., Perham,R.N. and Hol,W.G.
  TITLE     Protein-protein interactions in the pyruvate dehydrogenase
            multienzyme complex: dihydrolipoamide dehydrogenase complexed with
            the binding domain of dihydrolipoamide acetyltransferase
  JOURNAL   Structure 4 (3), 277-286 (1996)
   PUBMED   8805537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07992.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Lacticaseibacillus paracasei"
                     /db_xref="taxon:1597"
     Protein         1..454
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=48812
     Region          1..427
                     /region_name="Pyr_redox_2"
                     /note="Pyridine nucleotide-disulphide oxidoreductase;
                     cl39093"
                     /db_xref="CDD:476868"
ORIGIN      
        1 mkvlvigath agtfatqqil aehpdydvtv yernsnlsfl scgialwvgd hvsdpdkmfy
       61 sspealaalg anmqmehdvl aidpaektve vkdlktgnvt tdtydklvyt tgstpivpni
      121 pgihdtdvhl cknwhdakal kalaptiksa ivigagyiga elaeqyaltd kqvtlidglp
      181 rvlaknfdat itdrveklyt dhgvnlalge mvtgftqgtd gemtvttdkg sytadtavlc
      241 tgfrpntell kdhletlpng avitdaymqt sdpaifaagd tatvhynptg kndyiplatn
      301 avrqgilvgk niekptekyl gtqsssavel fehaiaasgm ttegakargi evasvtieqd
      361 yrpdfmlttt pvlcsltwdp kthevkggaf fskhdisqsa nvislaiqth mtietlamvd
      421 mlfqpnfdqp inwvnavama avakaqemek tpva
//
LOCUS       WP_258113793            2231 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase [Lacticaseibacillus paracasei].
ACCESSION   WP_258113793
VERSION     WP_258113793.1
KEYWORDS    RefSeq.
SOURCE      Lacticaseibacillus paracasei
  ORGANISM  Lacticaseibacillus paracasei
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2231
                     /organism="Lacticaseibacillus paracasei"
                     /db_xref="taxon:1597"
     Protein         1..2231
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=236220
     Region          8..>150
                     /region_name="Agg_substance"
                     /note="LPXTG-anchored aggregation substance; NF033875"
                     /db_xref="CDD:411439"
     Region          9..50
                     /region_name="KxYKxGKxW_sig"
                     /note="KxYKxGKxW signal peptide; pfam19258"
                     /db_xref="CDD:466014"
     Region          190..532
                     /region_name="Peptidases_S8_C5a_Peptidase"
                     /note="Peptidase S8 family domain in Streptococcal C5a
                     peptidases; cd07475"
                     /db_xref="CDD:173801"
     Site            order(207,269,334..336,368,462)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:173801"
     Site            order(207,269,462)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173801"
     Region          546..654
                     /region_name="fn3_6"
                     /note="Fibronectin type-III domain; cl05663"
                     /db_xref="CDD:471288"
     Region          <1359..1836
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          1911..>2190
                     /region_name="PRK08581"
                     /note="amidase domain-containing protein"
                     /db_xref="CDD:236304"
ORIGIN      
        1 mnrvkpfsqe krrykmyksg rhwvysaivt fgaasflmmq paqgvsadaa apptttqtks
       61 nqaapdaasa dspvskpasa ttgqvtssad tptttaasat ptatakpatp apvtsqakpe
      121 asakakqptq ptsvtpstpa ttntktaqkt vsqpaqkapa apakpapiak paptsnpenk
      181 asltkgnvqp lwdqnikgqg mvaavidqgv ephpdfrlsd aktaalsedq vkaftashgy
      241 gdyvnekipf fydytnnvne nlkfdtsnhg qhlagiiaan gqpsdskkyv tgiapeaqll
      301 smkilgksss dslnnaarai ydavdlgana inisfgmgvd iddptaegqa aikfatdhgv
      361 fvtvatgnng haggiydksa sngittsyqp anastlttps atpsamavaa gndvldakaa
      421 lisasswgpt asyklkpdit apgekvastl lndelgkvsg tsqanayvtg asllvmqnlk
      481 rstnltgaql vkavklalmn aanpildiny pgqiisprrq gagqidgaka anltvsaegt
      541 ddagsvslqq ftgsksfvit lenrgtdqqt ytldlgqpat evidtannkt vhdrtlsgat
      601 lttatptftl dagaskkitf tlslddtvkl nqvvegfikf kaaddrqsis vpymgyygst
      661 ndeavfdkpa neegsifkgg ylvdnnhnpl gitdptslse lvnnptngft wqtigakvqn
      721 nkvafspngd gisdtitpyv ftkqnlkqvi aqildqddkv mrvidqetdt tksflevgst
      781 tnadlaksis mflnpdklkw dgqvydqttg qmvpakdgiy tyrligmtyt pgennmqtms
      841 lpvavdtikp tlsnlaysdg kltadysdqg vgftaysqak ltigsatygv plnhdnqsts
      901 gtvsyqlsde qlvllkkgdg klmltitdla gnrseasiqa ingenkevdp pfiwpqvrws
      961 lpigtdniir pdglyqaatk dsiytvqamv pagqdfivta tdsksgrdyl gnldkttgtv
     1021 tfkvdatgyp yarlsitala rdgfgdfiqs psiaefvift sknytgysne ktktdpfdde
     1081 atvmgrakvi sgadyskpit tkgkfingia fldlnnnkrt lvgidsastf ydaklktltl
     1141 rgkvsdpkns klrifvtprq ndpqnevtfa adgsfsmtmp cnpteernig yvlttldkdg
     1201 kektnggfll lymdttlptl elsdadsmki dddgtylvtt dadtfsikgs vtdniggyrl
     1261 ysngnniftq qnlagfnahq ssaapnqltn gynpygaasf detyqltdgl niitlqavdq
     1321 vgntvtktfn vtktpkllke esldeleitp eqqdqkpksd tdevlvttps teeslvtpst
     1381 eptmvnpeds kvetsnpvve idtskeaqsd gngdtatntp asvttgvden pvdnspnaat
     1441 tmpnhakgvd sdaeateatn tkdntpgtaa ptstdpatnk esptksevdp tatslpdsqv
     1501 vetatettvn edkdnktddd eptvtnltts kdsaihpksd paaslqsndk aveaaiendk
     1561 iaekeghqsa ntqpaitdvt tdknsavkpe idsaassqsn dkaveaamed skvendkgsk
     1621 sdsaetniap tmaknsgvks eidltaiapr dntatssgta tenanvkddk gnktdtvesa
     1681 vtdteddneg tvkseiesva ttpssnttta teitkentpt edekdnqvnv vettdthpkp
     1741 ikdratksei eseatapskt evgetvaeda kgehdksnks ddveptvsdr ktdegraiks
     1801 esdasaitpn ednldettve eakaednrea aagtistvaa dpkasednsv kskmdattia
     1861 pidnkaietv tettgvekve shkstdtesp vtdpaidkdr avnsditpat asptadkape
     1921 attesvnven teshhpdige tsvsdsqagk dsaaeskvdp katpssdntt tgstvetltt
     1981 gseqnsqint skttvtpatd dkkvpsetia paktsddtae fgtatttsgq ntltkteves
     2041 snhatnhpdt tdsstdatlq pdeptisiea tkptpstedn pvqpnvdqkv sdqksdkdnq
     2101 dnptaieknp kskvtddeet isktrqkdpk snivekeddt ilivqkglkt etvkdaepas
     2161 pldqktsalk qkeskektla ksvhstksaa kalppmgmqn shwlqalgia llgmvfalsi
     2221 gltskkkhek n
//
LOCUS       WP_258113812             281 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase [Lacticaseibacillus paracasei].
ACCESSION   WP_258113812
VERSION     WP_258113812.1
KEYWORDS    RefSeq.
SOURCE      Lacticaseibacillus paracasei
  ORGANISM  Lacticaseibacillus paracasei
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (residues 1 to 281)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 281)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Lacticaseibacillus paracasei"
                     /db_xref="taxon:1597"
     Protein         1..281
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=30901
     Region          2..266
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     Site            order(17..19,48,53,79,112,141..142,164,192..198,221,
                     237..240,245,248..249)
                     /site_type="active"
                     /db_xref="CDD:381296"
     Site            order(48,53,79,112)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381296"
ORIGIN      
        1 mktikiggvn vpimgmgtwy lgegnaaqse qeaaalkygl nhgltvidta emygngaaes
       61 ligsflgdyd raniyliskf npshadkrqm rtalknslkr lrtdyldlyl lhwrgstpla
      121 etleglqdlq keglikqygv snfdvddmdq ltlepggdqi aanevlynlq srgieydllp
      181 qqkqanitti gyspfgsgsg ksiklppelr tlakeknist hqlmlawvlr hgdvltiprs
      241 geashmaeni aavdvtfspd elalfdqafp sprhhillqm i
//
LOCUS       WP_258113849             185 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF669 domain-containing protein [Lacticaseibacillus paracasei].
ACCESSION   WP_258113849
VERSION     WP_258113849.1
KEYWORDS    RefSeq.
SOURCE      Lacticaseibacillus paracasei
  ORGANISM  Lacticaseibacillus paracasei
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016896.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05037.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Lacticaseibacillus paracasei"
                     /db_xref="taxon:1597"
     Protein         1..185
                     /product="DUF669 domain-containing protein"
                     /calculated_mol_wt=20825
     Region          <25..>60
                     /region_name="Motor_domain"
                     /note="Myosin and Kinesin motor domain; cl22853"
                     /db_xref="CDD:473979"
     Region          <148..185
                     /region_name="Replication protein A, class 2b
                     aminoacyl-tRNA synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold."
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     cl09930"
                     /db_xref="CDD:471953"
ORIGIN      
        1 maitmdysqa aegngdiqdg vyecvinrfg fdnykdrefi kfdlivrndv pqkyqnkhif
       61 dnqypkkdtg dyamgylfmi gknagipdhk awadlaamla dftghavkvt vkneeyngkt
      121 yphikkwept afpqiqhrwk dskdesssns kpsfgtpaqa sqtntadpfa nngkpidisd
      181 ddlpf
//
LOCUS       WP_258113848             235 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Lacticaseibacillus paracasei].
ACCESSION   WP_258113848
VERSION     WP_258113848.1
KEYWORDS    RefSeq.
SOURCE      Lacticaseibacillus paracasei
  ORGANISM  Lacticaseibacillus paracasei
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024870.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13479.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Lacticaseibacillus paracasei"
                     /db_xref="taxon:1597"
     Protein         1..235
                     /product="AAA family ATPase"
                     /calculated_mol_wt=26338
     Region          14..225
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
ORIGIN      
        1 mqpikhasai drtnnwrvli ygkpgvgkts airnldgktl vldlddsskv lsgapnidvq
       61 pfdrskpsee wkeflknlae rvsgydnlvi dnvsafekdw fvemgrhskn gignelqdys
      121 rwtnyfarim tmifmdapvn vlvtawentr dvtsetgqsf sqyapairds vrdgllgltd
      181 vvgrvvvnpk tdgrgvileg tdaifaknrl dnrklvpike lfkfgnqeks ikqed
//
LOCUS       WP_258113865             176 aa            linear   BCT 02-MAR-2025
DEFINITION  NUMOD4 domain-containing protein [Lacticaseibacillus paracasei].
ACCESSION   WP_258113865
VERSION     WP_258113865.1
KEYWORDS    RefSeq.
SOURCE      Lacticaseibacillus paracasei
  ORGANISM  Lacticaseibacillus paracasei
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (residues 1 to 176)
  AUTHORS   Sitbon,E. and Pietrokovski,S.
  TITLE     New types of conserved sequence domains in DNA-binding regions of
            homing endonucleases
  JOURNAL   Trends Biochem Sci 28 (9), 473-477 (2003)
   PUBMED   13678957
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019106.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07463.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Lacticaseibacillus paracasei"
                     /db_xref="taxon:1597"
     Protein         1..176
                     /product="NUMOD4 domain-containing protein"
                     /GO_function="GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /calculated_mol_wt=19996
     Region          5..58
                     /region_name="NUMOD4"
                     /note="NUMOD4 motif; pfam07463"
                     /db_xref="CDD:462171"
     Region          66..109
                     /region_name="HNHc"
                     /note="HNH nucleases; HNH endonuclease signature which is
                     found in viral, prokaryotic, and eukaryotic proteins. The
                     alignment includes members of the large group of homing
                     endonucleases, yeast intron 1 protein, MutS, as well as
                     bacterial colicins, pyocins, and...; cl00083"
                     /db_xref="CDD:469607"
     Region          <137..172
                     /region_name="IENR1"
                     /note="Intron encoded nuclease repeat motif; smart00497"
                     /db_xref="CDD:197761"
ORIGIN      
        1 msekeiwkdi edykglyqvs nlgrvrsler valnghsvke kvlasfpnrn gylkvnlywd
       61 rsikqvfihr lvaaafldnp dnlpevnhid edkgnnlven lewctalynt nygtrteraa
      121 kanerpiyav sgsghryffe sarkaaellg ldrsavskcl rgkrkyhggf sfelav
//
LOCUS       WP_258113870              79 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Lacticaseibacillus paracasei].
ACCESSION   WP_258113870
VERSION     WP_258113870.1
KEYWORDS    RefSeq.
SOURCE      Lacticaseibacillus paracasei
  ORGANISM  Lacticaseibacillus paracasei
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (residues 1 to 79)
  AUTHORS   Kelly,G., Prasannan,S., Daniell,S., Fleming,K., Frankel,G.,
            Dougan,G., Connerton,I. and Matthews,S.
  TITLE     Structure of the cell-adhesion fragment of intimin from
            enteropathogenic Escherichia coli
  JOURNAL   Nat Struct Biol 6 (4), 313-318 (1999)
   PUBMED   10201396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014427.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02368.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Lacticaseibacillus paracasei"
                     /db_xref="taxon:1597"
     Protein         1..79
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=7778
ORIGIN      
        1 msqktftgdv gatkditvtv tpdgapqave avssnekvat vvkksdgvyt itnltagtat
       61 itfstngiss tlavtvnag
//
LOCUS       WP_258113976              36 aa            linear   BCT 02-MAR-2025
DEFINITION  XkdX family protein [Lacticaseibacillus paracasei].
ACCESSION   WP_258113976
VERSION     WP_258113976.1
KEYWORDS    RefSeq.
SOURCE      Lacticaseibacillus paracasei
  ORGANISM  Lacticaseibacillus paracasei
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021229.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09693.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..36
                     /organism="Lacticaseibacillus paracasei"
                     /db_xref="taxon:1597"
     Protein         1..36
                     /product="XkdX family protein"
                     /calculated_mol_wt=3983
ORIGIN      
        1 mlfyswgidl tpyvpvmitp deykqitgkd yvggks
//
LOCUS       WP_258114077             266 aa            linear   BCT 02-MAR-2025
DEFINITION  phage terminase small subunit [Escherichia coli].
ACCESSION   WP_258114077
VERSION     WP_258114077.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 266)
  AUTHORS   Linderoth,N.A., Ziermann,R., Haggard-Ljungquist,E., Christie,G.E.
            and Calendar,R.
  TITLE     Nucleotide sequence of the DNA packaging and capsid synthesis genes
            of bacteriophage P2
  JOURNAL   Nucleic Acids Res 19 (25), 7207-7214 (1991)
   PUBMED   1837355
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017731.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05944.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     gene            1..266
                     /gene="gpM"
     Protein         1..266
                     /product="phage terminase small subunit"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /GO_process="GO:0019069 - viral capsid assembly [Evidence
                     IEA]"
                     /calculated_mol_wt=28793
     Region          1..224
                     /region_name="Phage_term_smal"
                     /note="Phage small terminase subunit; cl19614"
                     /db_xref="CDD:450336"
ORIGIN      
        1 mitpaqqhwq nvmaqragra negvdhatrt aheevlyrlr laqarlkgvq arsakaaikk
       61 ellpdfsgwi egtleadggq qdeviatlmv waidcgdlpl alrigayvvr hnlimpdnfg
      121 rtaatvltee icnpvltqag tdadadlsaf iepldtlrei vtdqdmpdev raklckacaf
      181 arrglsdads malslkllre amhlnpnagv kreiatlsra lkkadsaaap edasaqqaqd
      241 esskskkttr kpatrkttat qkakrg
//
LOCUS       WP_258113545             478 aa            linear   BCT 02-MAR-2025
DEFINITION  Spo0B domain-containing protein [Aerococcus urinae].
ACCESSION   WP_258113545
VERSION     WP_258113545.1
KEYWORDS    RefSeq.
SOURCE      Aerococcus urinae
  ORGANISM  Aerococcus urinae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Aerococcaceae; Aerococcus.
REFERENCE   1  (residues 1 to 478)
  AUTHORS   Varughese,K.I., Madhusudan, Zhou,X.Z., Whiteley,J.M. and Hoch,J.A.
  TITLE     Formation of a novel four-helix bundle and molecular recognition
            sites by dimerization of a response regulator phosphotransferase
  JOURNAL   Mol Cell 2 (4), 485-493 (1998)
   PUBMED   9809070
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026040.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14689.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Aerococcus urinae"
                     /db_xref="taxon:1376"
     Protein         1..478
                     /product="Spo0B domain-containing protein"
                     /calculated_mol_wt=54535
     Region          1..429
                     /region_name="PRK11086"
                     /note="sensory histidine kinase DcuS; Provisional"
                     /db_xref="CDD:236839"
ORIGIN      
        1 mtftlvivtl limffiltrs skqtivdsqa dmllkvghei addpfiqssa edthfsqqii
       61 dyasaeearf gldyvvimtk dstrlthpnr hligspfqge qdqydalngk sytrtgqgpm
      121 grsmrafvpi lnqenqvvga valgimlpkl nllfdqarht vissilvafl vagimaiwla
      181 yslknrmlgm epeeiaqvve ernamfnytd mailitdpkg kirfennsai tyignylnqp
      241 ysaifpnlkv kdkvfmslik svnedeyvgs vapiivnrek rgylfilrna levidlvnql
      301 enshyfakql vkqnhdflnk vhviygltdl geykelksyl qdlisdkshf nqnvqllinn
      361 ptiagylllg anhystyrqi tvkdeipeaq nfsqnnewlk itntieesln qlqdtvkidi
      421 eleyvndhll tsfylypdqg lyhkvakvld qvhndfdkvk innkrnyfvl syqvqygg
//
LOCUS       WP_258114146            1255 aa            linear   BCT 02-MAR-2025
DEFINITION  LPD7 domain-containing protein [Escherichia coli].
ACCESSION   WP_258114146
VERSION     WP_258114146.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 1255)
  AUTHORS   Iyer,L.M., Burroughs,A.M., Anand,S., de Souza,R.F. and Aravind,L.
  TITLE     Polyvalent Proteins, a Pervasive Theme in the Intergenomic
            Biological Conflicts of Bacteriophages and Conjugative Elements
  JOURNAL   J Bacteriol 199 (15), e00245-17 (2017)
   PUBMED   28559295
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 1255)
  AUTHORS   Maindola,P., Raina,R., Goyal,P., Atmakuri,K., Ojha,A., Gupta,S.,
            Christie,P.J., Iyer,L.M., Aravind,L. and Arockiasamy,A.
  TITLE     Multiple enzymatic activities of ParB/Srx superfamily mediate
            sexual conflict among conjugative plasmids
  JOURNAL   Nat Commun 5, 5322 (2014)
   PUBMED   25358815
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037421.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18821.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1255
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..1255
                     /product="LPD7 domain-containing protein"
                     /calculated_mol_wt=137602
     Region          8..59
                     /region_name="DUF5710"
                     /note="Domain of unknown function (DUF5710); cl46755"
                     /db_xref="CDD:481095"
     Region          69..>384
                     /region_name="COG4643"
                     /note="Uncharacterized domain associated with
                     phage/plasmid primase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:443681"
     Region          <373..571
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          <521..694
                     /region_name="NESP55"
                     /note="Neuroendocrine-specific golgi protein P55 (NESP55);
                     pfam06390"
                     /db_xref="CDD:115071"
     Region          <777..>944
                     /region_name="PRK13878"
                     /note="conjugal transfer relaxase TraI; Provisional"
                     /db_xref="CDD:237539"
     Region          779..861
                     /region_name="LPD7"
                     /note="Large polyvalent protein-associated domain 7;
                     pfam18821"
                     /db_xref="CDD:465879"
ORIGIN      
        1 mpsvsryrtw lavpadeied lkkahppmng htpvlwdkeh klwfarpgad lsrldrwlpr
       61 pqdvsmngsd pvtefaqvle naglvlkelp vmdgkihrvp taddkkgqks gayrgfldgr
      121 pagwyrdyrs addspitwtf sggeqtdpra rlhlkahsmq rredaerelk aqynrqaaya
      181 rryvnkwpqa taheyltrkg iqaapgvrvn nknelvipfs nrngairsyq ripvtggkda
      241 rilkdsektg nwfalgtprn gqpvlfaegy ataaslheat glpvlmtvdg gnmiavaena
      301 rqkwtqspfi fcadndhair vnkgivsatk aaeltggsvi fpaftdaeka qgltdfndld
      361 asrgraafqh vinaqlehig vstpnsntpe irealvignl vftpvhteek tmtpteypet
      421 spdtghshdq gpslpsatqq eqpaasssni adetqsftsh atenngkder hadnvqaqte
      481 ssvvqdspae spaspestta sapdepahpa eppekvvsva tdkdwrefea elsqpeknes
      541 qqesgtspei papaaapasp edspssetmn esaepspspd avkeemtvmt epddkqstgi
      601 spdtpreeav nhvtediplq pepflpesdg peeyenysay qelmnnenpe hlqensdmps
      661 qpdtdhvqad eselqattdt aepavrdept pqqpvqstsp sdntssfldk argfftrkkt
      721 dsqahensdp tpspettttt papdsivyap erpdapisln ldeiiksleg eeradrtvly
      781 kldgkpafid rvnrlemvng asnddrsvla alavatdfyg gvieltgsda fkqkamqlii
      841 ehnikvrmkf pdqraalekl rkemavgkdt vvthkptpel nrntpeqpav pdpvqekeat
      901 qspaspvape astvstvpas spaepgktad aaqgeeppgk lrpgdsvtav lhnfgraeya
      961 pgkgesffve lknrsgskly wgeqleslvk nhqkgdvvtl tlqnreqfil pgeqkarfrn
     1021 kwsmesvtng isvshdnpdk gqriqaipve tfmkvaaqis qgwpeemkal rmpenvgshl
     1081 figedrhpvs apqnanqvte itsaapdklt pvlgsvdkdt relnlllvqs adehlqgvvr
     1141 lngtlypala tpsadnsqlv inaltdkglr fagygeavnh dadstnrpap elmqfhlktr
     1201 eeplfaavyt pekqpdalyr nlgfeqswqq wsnsqkpedr qektlhqdls hspgr
//
LOCUS       WP_258114227             180 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1133 family protein [Escherichia coli].
ACCESSION   WP_258114227
VERSION     WP_258114227.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06576.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..180
                     /product="DUF1133 family protein"
                     /calculated_mol_wt=20519
     Region          1..174
                     /region_name="Phage_antitermQ"
                     /note="Phage antitermination protein Q; cl29970"
                     /db_xref="CDD:453083"
ORIGIN      
        1 miyptnigkn gehfrlatle svwiqgklrm wgrwsyiggg rsgnmfnqfl askkltktai
       61 nealfrmkka giekpelesf lreiingkqk swlvhctdae alcidrvise vladhpglic
      121 ilqqryegrg mtkrkmaell ndahpewcfs tcekrianwl avaeyalyip mreslaqkia
//
LOCUS       WP_258114285             305 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF930 domain-containing protein [Agrobacterium fabrum].
ACCESSION   WP_258114285
VERSION     WP_258114285.1
KEYWORDS    RefSeq.
SOURCE      Agrobacterium fabrum
  ORGANISM  Agrobacterium fabrum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium; Agrobacterium tumefaciens complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017837.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06059.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Agrobacterium fabrum"
                     /db_xref="taxon:1176649"
     Protein         1..305
                     /product="DUF930 domain-containing protein"
                     /calculated_mol_wt=32753
     Region          <23..179
                     /region_name="rne"
                     /note="ribonuclease E; Reviewed; PRK10811"
                     /db_xref="CDD:236766"
     Region          206..302
                     /region_name="DUF930"
                     /note="Domain of Unknown Function (DUF930); pfam06059"
                     /db_xref="CDD:428747"
ORIGIN      
        1 mpvsvllhlv vvalfffelp eriaepqepe svkvelvppp eekkeeaapp patvakeekp
       61 qpppppppap pkedvkptpq pqatlpaiam rpeemqadke dkpgkaeeae kseaseepas
      121 qpekaaeekp appaansdlq asaeqgeiav spvkeetqpe qppvpqakpa eekpaevaek
      181 kpaklpaaks llssalltpa qrrqifgdlp prrrivqlcq aealaqirei ypatrgmygf
      241 sdtggrisgn vldatggafn vgdvwrdvtf qcdvdvdnya vtafrfkigd vitpaeatkr
      301 gftgr
//
LOCUS       WP_258114310             440 aa            linear   BCT 02-MAR-2025
DEFINITION  solute carrier family 23 protein [Agrobacterium fabrum].
ACCESSION   WP_258114310
VERSION     WP_258114310.1
KEYWORDS    RefSeq.
SOURCE      Agrobacterium fabrum
  ORGANISM  Agrobacterium fabrum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium; Agrobacterium tumefaciens complex.
REFERENCE   1  (residues 1 to 440)
  AUTHORS   Hogue,D.L. and Ling,V.
  TITLE     A human nucleobase transporter-like cDNA (SLC23A1): member of a
            transporter family conserved from bacteria to mammals
  JOURNAL   Genomics 59 (1), 18-23 (1999)
   PUBMED   10395795
REFERENCE   2  (residues 1 to 440)
  AUTHORS   Tsukaguchi,H., Tokui,T., Mackenzie,B., Berger,U.V., Chen,X.Z.,
            Wang,Y., Brubaker,R.F. and Hediger,M.A.
  TITLE     A family of mammalian Na+-dependent L-ascorbic acid transporters
  JOURNAL   Nature 399 (6731), 70-75 (1999)
   PUBMED   10331392
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013056.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00860.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Agrobacterium fabrum"
                     /db_xref="taxon:1176649"
     Protein         1..440
                     /product="solute carrier family 23 protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=44705
     Region          7..431
                     /region_name="Xan_ur_permease"
                     /note="Permease family; cl23746"
                     /db_xref="CDD:474042"
ORIGIN      
        1 msdtggyfpr wrlktegrim pderlpvgqt avlglqhvva mfgstvlapl imgfdpnvsi
       61 lfsgistlif fiavggrvps ylgssfafig pvlvatgaaa gaaspdiala lggiiaagvl
      121 yaligvivmi vghnwieklm ppvltgaiva aiglvlapia iasasgtgpg npdgdqlsrw
      181 iailtvtsvg aiavyapgmt rrlpillgga iaylvylvla ngfglgkpvd fagvaaaawf
      241 glpsfttpvf sapaialiap vvvilvaenl ghikaigamt grnldpylgr afigdgiati
      301 fsgafggtgm ttyaenmgvm aitrifstlv fvvaalvaii lgfspkfgal iqtipgpvig
      361 glsvvvfgli aatagriwve nkvdfseprn litvgialvl gagnfklnva gftldgigta
      421 tigaiafyhl lglgrpaqgr
//
LOCUS       WP_258114325             424 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Agrobacterium fabrum].
ACCESSION   WP_258114325
VERSION     WP_258114325.1
KEYWORDS    RefSeq.
SOURCE      Agrobacterium fabrum
  ORGANISM  Agrobacterium fabrum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium; Agrobacterium tumefaciens complex.
REFERENCE   1  (residues 1 to 424)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 424)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 424)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 424)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Agrobacterium fabrum"
                     /db_xref="taxon:1176649"
     Protein         1..424
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=45992
     Region          26..423
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mrliktllvg tvlgltalpa lakqdivwwd flsggdgvrm kalidafnke hpdiqvkgtt
       61 lewgvpfytk vrtasavgeg pdvmtyhlsr aplalqekvl seitdkdlee aglkkddffs
      121 apleaathdg klyavpfdih alvlyynadl lkgspyldae gkltgiksmd dfekalawak
      181 ekgvetpvty qsggeagvwr vfytlfsqqg gelvtngevl agdnaekaak aidtmskwre
      241 ngwapeqaey pasvalfsag ksafqlngvw evptykdlek ngklgfkwsa vevppfmgkr
      301 atwadshafa ipnqgdktvs gekraavmkl igwmekhais wadaghipay ksitessdyk
      361 amqpnatyas laeaaefdpk ttitgvaspa ydaalnviap aiqgfmsgtd aveqikeelq
      421 sklk
//
LOCUS       WP_258114664              94 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase gpA endonuclease subunit, partial [Escherichia coli].
ACCESSION   WP_258114664
VERSION     WP_258114664.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 94)
  AUTHORS   Ortiz,D., delToro,D., Ordyan,M., Pajak,J., Sippy,J., Catala,A.,
            Oh,C.S., Vu,A., Arya,G., Feiss,M., Smith,D.E. and Catalano,C.E.
  TITLE     Evidence that a catalytic glutamate and an 'Arginine Toggle' act in
            concert to mediate ATP hydrolysis and mechanochemical coupling in a
            viral DNA packaging motor
  JOURNAL   Nucleic Acids Res 47 (3), 1404-1415 (2019)
   PUBMED   30541105
REFERENCE   2  (residues 1 to 94)
  AUTHORS   delToro,D., Ortiz,D., Ordyan,M., Sippy,J., Oh,C.S., Keller,N.,
            Feiss,M., Catalano,C.E. and Smith,D.E.
  TITLE     Walker-A Motif Acts to Coordinate ATP Hydrolysis with Motor Output
            in Viral DNA Packaging
  JOURNAL   J Mol Biol 428 (13), 2709-2729 (2016)
   PUBMED   27139643
REFERENCE   3  (residues 1 to 94)
  AUTHORS   Andrews,B.T. and Catalano,C.E.
  TITLE     The enzymology of a viral genome packaging motor is influenced by
            the assembly state of the motor subunits
  JOURNAL   Biochemistry 51 (46), 9342-9353 (2012)
   PUBMED   23134123
REFERENCE   4  (residues 1 to 94)
  AUTHORS   Ortega,M.E., Gaussier,H. and Catalano,C.E.
  TITLE     The DNA maturation domain of gpA, the DNA packaging motor protein
            of bacteriophage lambda, contains an ATPase site associated with
            endonuclease activity
  JOURNAL   J Mol Biol 373 (4), 851-865 (2007)
   PUBMED   17870092
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042573.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20454.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..94
                     /product="terminase gpA endonuclease subunit"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
     Region          <1..67
                     /region_name="gpA1"
                     /note="Phage terminase, large subunit GpA [Mobilome:
                     prophages, transposons]; COG5525"
                     /db_xref="CDD:444276"
ORIGIN      
        1 rssdgkwskp grganeafdl mvyaealvil hgyekiqwpd apewacretw lecvsdnaep
       61 pvlpelerpp arkkkrkkma pdednpwvts ggwl
//
LOCUS       WP_258114695              94 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase gpA endonuclease subunit, partial [Escherichia coli].
ACCESSION   WP_258114695
VERSION     WP_258114695.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 94)
  AUTHORS   Ortiz,D., delToro,D., Ordyan,M., Pajak,J., Sippy,J., Catala,A.,
            Oh,C.S., Vu,A., Arya,G., Feiss,M., Smith,D.E. and Catalano,C.E.
  TITLE     Evidence that a catalytic glutamate and an 'Arginine Toggle' act in
            concert to mediate ATP hydrolysis and mechanochemical coupling in a
            viral DNA packaging motor
  JOURNAL   Nucleic Acids Res 47 (3), 1404-1415 (2019)
   PUBMED   30541105
REFERENCE   2  (residues 1 to 94)
  AUTHORS   delToro,D., Ortiz,D., Ordyan,M., Sippy,J., Oh,C.S., Keller,N.,
            Feiss,M., Catalano,C.E. and Smith,D.E.
  TITLE     Walker-A Motif Acts to Coordinate ATP Hydrolysis with Motor Output
            in Viral DNA Packaging
  JOURNAL   J Mol Biol 428 (13), 2709-2729 (2016)
   PUBMED   27139643
REFERENCE   3  (residues 1 to 94)
  AUTHORS   Andrews,B.T. and Catalano,C.E.
  TITLE     The enzymology of a viral genome packaging motor is influenced by
            the assembly state of the motor subunits
  JOURNAL   Biochemistry 51 (46), 9342-9353 (2012)
   PUBMED   23134123
REFERENCE   4  (residues 1 to 94)
  AUTHORS   Ortega,M.E., Gaussier,H. and Catalano,C.E.
  TITLE     The DNA maturation domain of gpA, the DNA packaging motor protein
            of bacteriophage lambda, contains an ATPase site associated with
            endonuclease activity
  JOURNAL   J Mol Biol 373 (4), 851-865 (2007)
   PUBMED   17870092
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042573.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20454.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..94
                     /product="terminase gpA endonuclease subunit"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
     Region          <1..88
                     /region_name="gpA1"
                     /note="Phage terminase, large subunit GpA [Mobilome:
                     prophages, transposons]; COG5525"
                     /db_xref="CDD:444276"
ORIGIN      
        1 rssdgkwskp grganeafdl mvyaealvil hgyekirwpd apewasretw lecvqdstep
       61 ssspepvstp vkkqkrkktv tddvnpwlts ggwl
//
LOCUS       WP_258114745             136 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase N-terminal domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_258114745
VERSION     WP_258114745.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025039.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13655.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>136
                     /product="reverse transcriptase N-terminal
                     domain-containing protein"
     Region          16..97
                     /region_name="RVT_N"
                     /note="N-terminal domain of reverse transcriptase;
                     pfam13655"
                     /db_xref="CDD:433382"
     Region          64..>135
                     /region_name="YkfC"
                     /note="Retron-type reverse transcriptase [Mobilome:
                     prophages, transposons]; COG3344"
                     /db_xref="CDD:442573"
ORIGIN      
        1 mnthisvsti phltgwhain wkacharvrk lqlriakatr qqqwrqvrel qrvltrsfsg
       61 kavavrrvte nagkrtpgid gkiwhtpkek wegicslnlc gyrpqslrri yipksngktr
      121 plgiptmrdr amqalw
//
LOCUS       WP_258114764              81 aa            linear   BCT 02-MAR-2025
DEFINITION  Ail/Lom family outer membrane beta-barrel protein, partial
            [Escherichia coli].
ACCESSION   WP_258114764
VERSION     WP_258114764.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 81)
  AUTHORS   Miller,V.L., Beer,K.B., Heusipp,G., Young,B.M. and Wachtel,M.R.
  TITLE     Identification of regions of Ail required for the invasion and
            serum resistance phenotypes
  JOURNAL   Mol Microbiol 41 (5), 1053-1062 (2001)
   PUBMED   11555286
REFERENCE   2  (residues 1 to 81)
  AUTHORS   Barondess,J.J. and Beckwith,J.
  TITLE     A bacterial virulence determinant encoded by lysogenic coliphage
            lambda
  JOURNAL   Nature 346 (6287), 871-874 (1990)
   PUBMED   2144037
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06316.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>81
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /GO_component="GO:0044384 - host outer membrane [Evidence
                     IEA]"
     Region          1..>81
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 sehqstlsag ylhartnvpg sddlnginvk yryeftdtlg lvtsfsyagd knrqltrysd
       61 trwhedsvrn rwfsvmagps v
//
LOCUS       WP_258114899             634 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Agrobacterium fabrum].
ACCESSION   WP_258114899
VERSION     WP_258114899.1
KEYWORDS    RefSeq.
SOURCE      Agrobacterium fabrum
  ORGANISM  Agrobacterium fabrum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium; Agrobacterium tumefaciens complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024945.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13556.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Agrobacterium fabrum"
                     /db_xref="taxon:1176649"
     Protein         1..634
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=70663
     Region          15..582
                     /region_name="GAF"
                     /note="GAF domain [Signal transduction mechanisms];
                     COG2203"
                     /db_xref="CDD:441805"
     Region          359..629
                     /region_name="CdaR"
                     /note="Sugar diacid utilization regulator CdaR
                     [Transcription, Signal transduction mechanisms]; COG3835"
                     /db_xref="CDD:443046"
ORIGIN      
        1 meiilsshpe lsrmqhegvl rfkdvdvate qtasllshtv ersderfrlv vdhsyftakr
       61 tifevssqcg eqiitrvvaa vqeavitvqt ktvdmlasvn aavinslddq eivhsvlaev
      121 mnvlphadag vfrlfdeesg ylipvshrgl pddytdyrlq pnesvsgevf vtgvpaihng
      181 rqniidahrv mspesqsfme rsrianallc vpvaaegkrl gtlttlcfsp rgtfspfdrt
      241 vleslaaqva vayqrslayk naiatssrle kmrsdlaskn veldravelh dkllrifsts
      301 gslverldlv aglfgvefrf envlgvdyrs rgwtdhsdsv eqmveiaeap vgffhfrpie
      361 dapfqralfg tlsafvaldf vrdmskldvl nasnrayfdd llkgveshgr lehfgfrler
      421 fhqimvakvs gplspdarls lhrsqtnlqn airlsntlvf hqddeiiivf sastaaalar
      481 ninammdrml hlniqvgasv vydligfhst aktqaqraae clvrrgqsgi lshqdmgiea
      541 llsgrdrhei idfahevlap llhdqkhefl yetlrsyiqe gksatraasc lkihnntlyq
      601 rlariemltg rkisnaedft llsvacqlys tysg
//
LOCUS       WP_258114578             376 aa            linear   BCT 02-MAR-2025
DEFINITION  phage integrase Arm DNA-binding domain-containing protein
            [Escherichia coli].
ACCESSION   WP_258114578
VERSION     WP_258114578.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 376)
  AUTHORS   Wojciak,J.M., Sarkar,D., Landy,A. and Clubb,R.T.
  TITLE     Arm-site binding by lambda -integrase: solution structure and
            functional characterization of its amino-terminal domain
  JOURNAL   Proc Natl Acad Sci U S A 99 (6), 3434-3439 (2002)
   PUBMED   11904406
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020572.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09003.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..376
                     /product="phage integrase Arm DNA-binding
                     domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0008907 - integrase activity [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=43041
     Region          2..73
                     /region_name="Arm-DNA-bind_1"
                     /note="Bacteriophage lambda integrase, Arm DNA-binding
                     domain; pfam09003"
                     /db_xref="CDD:430365"
     Region          197..372
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(212,226..227,305,307,331,363)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:271157"
     Site            order(226,331,334,354,363)
                     /site_type="active"
                     /db_xref="CDD:271157"
ORIGIN      
        1 marprkyktd vpglspyfdk rnnkvywryr hpitgknhgl gsidqklaet iaaeansrla
       61 rqqmeqmlsl qekiisdtgg sstvsifltn yrkiqqerye ngeiklntlk qkaaplrvfd
      121 erfgtrplda itvkdvvsvl eeykarghnr mgqifrkvli dvfreaqqtg dvppsfnpae
      181 sakkpqvris rqrltfeewm miynaaekdg yflqrgmlla lmtgqrlsdi ckmqfsdird
      241 gylhveqqkt gtriaiplal rcdklnltld dvvsscrdcv lspwllhhhh akgtakrggm
      301 vkpatltvaf kkardsvdyn wcpngtppsf heqrslserl freqgidtqi llghsnqkmt
      361 diyndargke wkklvi
//
LOCUS       WP_258114419              95 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6074 family protein [Agrobacterium fabrum].
ACCESSION   WP_258114419
VERSION     WP_258114419.1
KEYWORDS    RefSeq.
SOURCE      Agrobacterium fabrum
  ORGANISM  Agrobacterium fabrum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium; Agrobacterium tumefaciens complex.
REFERENCE   1  (residues 1 to 95)
  AUTHORS   Xu,L., Cheng,R., Li,J., Wang,Y., Zhu,B., Ma,S., Zhang,W., Dong,W.,
            Wang,S. and Zhang,J.
  TITLE     Identification of substituent groups and related genes involved in
            salecan biosynthesis in Agrobacterium sp. ZX09
  JOURNAL   Appl Microbiol Biotechnol 101 (2), 585-598 (2017)
   PUBMED   27678113
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039341.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19551.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Agrobacterium fabrum"
                     /db_xref="taxon:1176649"
     Protein         1..95
                     /product="DUF6074 family protein"
                     /calculated_mol_wt=10999
     Region          8..86
                     /region_name="DUF6074"
                     /note="Family of unknown function (DUF6074); pfam19551"
                     /db_xref="CDD:437383"
ORIGIN      
        1 mkstpiecei ivfppsrqig karrlaelmi plqikeerkr aasyysrqrd rfdmqmiaag
       61 yslerrkael elfeetlaie mgrlvvklak qekae
//
LOCUS       WP_258114957             502 aa            linear   BCT 02-MAR-2025
DEFINITION  ATPase domain-containing protein [Agrobacterium fabrum].
ACCESSION   WP_258114957
VERSION     WP_258114957.1
KEYWORDS    RefSeq.
SOURCE      Agrobacterium fabrum
  ORGANISM  Agrobacterium fabrum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium; Agrobacterium tumefaciens complex.
REFERENCE   1  (residues 1 to 502)
  AUTHORS   Iwasaki,H., Taniguchi,Y., Ishiura,M. and Kondo,T.
  TITLE     Physical interactions among circadian clock proteins KaiA, KaiB and
            KaiC in cyanobacteria
  JOURNAL   EMBO J 18 (5), 1137-1145 (1999)
   PUBMED   10064581
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018455.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06745.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Agrobacterium fabrum"
                     /db_xref="taxon:1176649"
     Protein         1..502
                     /product="ATPase domain-containing protein"
                     /calculated_mol_wt=55329
     Region          9..234
                     /region_name="KaiC-like_N"
                     /note="N-terminal domain of KaiC family protein;
                     uncharacterized subfamily; cd19488"
                     /db_xref="CDD:410896"
     Site            order(28,36..37,40,64..65,69,72..73,75..76,139,152,
                     155..156,159,162,173,179,181,184..185,194..195,197,
                     203..206,208,210..211,213..214,222)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:410896"
     Site            order(36..42,65,76..77,205,226..227)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410896"
     Region          251..468
                     /region_name="KaiC-like_C"
                     /note="C-terminal domain of KaiC family protein;
                     uncharacterized subfamily; cd19487"
                     /db_xref="CDD:410895"
     Site            order(270,278..279,282,306..307,311,314..315,317..318,370,
                     383,386..387,390,393,404,414,416,419..420,429..430,432,
                     437..440,442,444..445,447..448,456)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:410895"
     Site            order(278..284,307,318..319,439,460..461)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410895"
ORIGIN      
        1 mtdnsgakak tgveglddil sgglsrrhvf llegapgsgk ttialqflle ganigercly
       61 itlseteeel rdsasshgkd igdqveifel vppeslldad qqqsllyssd lelgettkli
      121 feafervkph rvvidslsei rllaqsslry rrqilalkhf fsrsdatvll lddmtsdamd
      181 ktvhsvvhgv ihleqlapdy gserrrlrvl kyrgqafrgg yhdftiktgg vevfprlral
      241 ehrlafertl vasgisefdd llgggvargs stlligpagt gkslfalqfv eaavgrgera
      301 aifvfdeelg llfdrtkemg ldleamrnkn llhieqldaa elspgefsqr vrdkvasfda
      361 ktvvidsing yqaampeena lilhmhellq ylnrqgantf itvaqhglvg dmkspvdvty
      421 ladtvillry feaearvrra isvikkrtgr hedtireyki gangltlgep lsafqgilrg
      481 vpifvgdrqp llqtldedgs hs
//
LOCUS       WP_258114994             174 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Agrobacterium fabrum].
ACCESSION   WP_258114994
VERSION     WP_258114994.1
KEYWORDS    RefSeq.
SOURCE      Agrobacterium fabrum
  ORGANISM  Agrobacterium fabrum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium; Agrobacterium tumefaciens complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Agrobacterium fabrum"
                     /db_xref="taxon:1176649"
     Protein         1..174
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=18709
     Region          5..>144
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 masslregvk shdgqpftsd dviftlgrag svpnspggfg gfmrnlasve adgnnaviin
       61 tkapaptlpg dlaniaivsr hagervdtad ynsgkaaiat gafrlttfkq gievglernp
      121 dwwgkkvtwe hatyrmissa nartifgcdi khrnecgleq sifvfddrrn qkvn
//
LOCUS       WP_258115027             219 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6766 family protein [Agrobacterium fabrum].
ACCESSION   WP_258115027
VERSION     WP_258115027.1
KEYWORDS    RefSeq.
SOURCE      Agrobacterium fabrum
  ORGANISM  Agrobacterium fabrum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium; Agrobacterium tumefaciens complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042831.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20554.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Agrobacterium fabrum"
                     /db_xref="taxon:1176649"
     Protein         1..219
                     /product="DUF6766 family protein"
                     /calculated_mol_wt=24162
     Region          2..218
                     /region_name="DUF6766"
                     /note="Domain of unknown function (DUF6766); pfam20554"
                     /db_xref="CDD:466703"
ORIGIN      
        1 mrlvrdnglt ivlvltsllt iggmlatgwa vynkelvqhh atpltlfsya rsghflsalf
       61 enweseflqm sayvmltafl fqrgsseskn pdepssqded paqkaddpea pwavraggfi
      121 raiysyslgl alfflfvvsf vlhlkysada aaletamhgn pettlfsylg stefwfesfq
      181 nwqseflsta vlvvlsiflr frgspeskpv aaphsetgg
//
LOCUS       WP_258115004             492 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-binding domain-containing protein [Agrobacterium fabrum].
ACCESSION   WP_258115004
VERSION     WP_258115004.1
KEYWORDS    RefSeq.
SOURCE      Agrobacterium fabrum
  ORGANISM  Agrobacterium fabrum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium; Agrobacterium tumefaciens complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025114.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13738.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Agrobacterium fabrum"
                     /db_xref="taxon:1176649"
     Protein         1..492
                     /product="NAD(P)-binding domain-containing protein"
                     /calculated_mol_wt=54587
     Region          48..>360
                     /region_name="CzcO"
                     /note="Predicted flavoprotein CzcO associated with the
                     cation diffusion facilitator CzcD [Inorganic ion transport
                     and metabolism]; COG2072"
                     /db_xref="CDD:441675"
ORIGIN      
        1 mtleqqdrte qqlaalnaqv rqdlcylnyp aanwskpvst sdgqlvsdvv iigggmcglv
       61 awhaltragi anirivdraa ngeegpwvty armetlrspk nllgpalgma sltfrawyta
      121 rfgkeaweel friprpmwme ylswyrqvme ipvennihvt rviprldgll eleieggkad
      181 piitrklvma tgrdglgept ipdfvkgmqr hvswahsadm idfqrlkgkr vvvigvgasa
      241 vdnaaealeq gagevrllar rktmptinkl mgigsygvta gfakidpewr wrlmdysvkq
      301 qtpaphnstl rvsrhsnayf hfdcgiqstk eeggevvitt ingrvfrtdf vilgtgfsid
      361 pvsrpelemf ngqiacwedr ytppageenp glgrfpwlqd dfsftekepg aapwlqhihc
      421 fnygssvslg kvsgdipais egalwlargi aaslfiadid hhwealkaye kpeldgsewt
      481 dadadpsmqk ta
//
LOCUS       WP_258115117             295 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF7007 domain-containing protein [Agrobacterium fabrum].
ACCESSION   WP_258115117
VERSION     WP_258115117.1
KEYWORDS    RefSeq.
SOURCE      Agrobacterium fabrum
  ORGANISM  Agrobacterium fabrum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium; Agrobacterium tumefaciens complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046788.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22653.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Agrobacterium fabrum"
                     /db_xref="taxon:1176649"
     Protein         1..295
                     /product="DUF7007 domain-containing protein"
                     /calculated_mol_wt=32606
ORIGIN      
        1 mkdstpetvg pptpdssgve fgrsadgmpv arvghlvfam vpardgqyfl asawrvtrpf
       61 adlkrgdfys hhgriedepa fharmleqae dsrelaslsr rtarihcntp wgpsqgatiy
      121 aegvvahtta ghggfklsvd rnaqvhpmlr sqdawyeeds awaavavafp dlftgfeqrc
      181 aartlkdwep dawetifgtr lapgeshtkd rrafeqqhan dwivisalrs dhhpgmtevl
      241 atrggrrdhg ieerrflvps adykagcfgf videtrhavy egpssfaswt grava
//
LOCUS       WP_258115198             162 aa            linear   BCT 02-MAR-2025
DEFINITION  cyclophilin-like fold protein [Agrobacterium fabrum].
ACCESSION   WP_258115198
VERSION     WP_258115198.1
KEYWORDS    RefSeq.
SOURCE      Agrobacterium fabrum
  ORGANISM  Agrobacterium fabrum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium; Agrobacterium tumefaciens complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037716.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18050.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Agrobacterium fabrum"
                     /db_xref="taxon:1176649"
     Protein         1..162
                     /product="cyclophilin-like fold protein"
                     /calculated_mol_wt=17482
     Region          45..160
                     /region_name="Cyclophil_like2"
                     /note="Cyclophilin-like family; cl41962"
                     /db_xref="CDD:477883"
ORIGIN      
        1 mmmlarlkwl liatlltgqa llgmpsavsa qaigprdgas rlagitisvg ekvirahlfd
       61 tptsrdllaq lpatipmsrl rereyygrpl gplstegrrr egfdngdigy tarsgylavf
      121 fdnskdpdis dlivigkvts disdfnglgq svnmkiersk ad
//
LOCUS       WP_258114915             397 aa            linear   BCT 02-MAR-2025
DEFINITION  abortive infection family protein [Agrobacterium fabrum].
ACCESSION   WP_258114915
VERSION     WP_258114915.1
KEYWORDS    RefSeq.
SOURCE      Agrobacterium fabrum
  ORGANISM  Agrobacterium fabrum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium; Agrobacterium tumefaciens complex.
REFERENCE   1  (residues 1 to 397)
  AUTHORS   Deng,Y.M., Harvey,M.L., Liu,C.Q. and Dunn,N.W.
  TITLE     A novel plasmid-encoded phage abortive infection system from
            Lactococcus lactis biovar. diacetylactis
  JOURNAL   FEMS Microbiol Lett 146 (1), 149-154 (1997)
   PUBMED   8997719
  REMARK    Erratum:[FEMS Microbiol Lett 1997 Mar 15;148(2):273]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025713.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14355.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Agrobacterium fabrum"
                     /db_xref="taxon:1176649"
     Protein         1..397
                     /product="abortive infection family protein"
                     /calculated_mol_wt=43659
     Region          96..255
                     /region_name="AbiJ_NTD3"
                     /note="AbiJ N-terminal domain 3; pfam18860"
                     /db_xref="CDD:436789"
     Region          298..373
                     /region_name="Abi_C"
                     /note="Abortive infection C-terminus; pfam14355"
                     /db_xref="CDD:433897"
ORIGIN      
        1 mttapasmir elrteianai sdykaydvpg vcvrlglddg dsseafsskf kyamnrlvsv
       61 paedllplak kllqdvsnyr lsehvakvee fgqpgiteit rrrllselkt rplatemeev
      121 eliqrawpld eipspygtsg gilediyqht ernydwetdd vlihlgfltc sqaqlfrfle
      181 evtapvvqap eaqasliadl nnhlqhdgfr lavvgkvsgs svykiqrail gspadqgisa
      241 alhafdpadv harwtaaver rvddprgait lartlledvc kwildeaead ypdnadlpvl
      301 yrklakvlrl apddhteqtf kqllgscqqi vellgslrsk lgdahspgpk kakpqprhae
      361 lavnlsgtma tflvetwrar kaevgqsspa dsaatti
//
LOCUS       WP_258115360             356 aa            linear   BCT 02-MAR-2025
DEFINITION  fimbrial protein [Escherichia coli].
ACCESSION   WP_258115360
VERSION     WP_258115360.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012635.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00419.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..356
                     /product="fimbrial protein"
                     /GO_component="GO:0009289 - pilus [Evidence IEA]"
                     /GO_process="GO:0007155 - cell adhesion [Evidence IEA]"
                     /calculated_mol_wt=37747
     Region          7..356
                     /region_name="Fimbrial"
                     /note="Fimbrial protein; cl01416"
                     /db_xref="CDD:445401"
ORIGIN      
        1 mqiifgekcv sllrlffaav lmlwcaqtaa ysgqchttqg npyigvnfgv ktleeeanta
       61 gvvkdkfyqw nesndyyvsc dcdkdnvrsg rwafaadspl vylgdnwyki ndylaakvll
      121 qvkgssptav pfenvgtggd trwhicdpgg qrlggqgasg nsgsfslkil qpfvgsvvip
      181 pmalarlyec ynipagdsct ttgtpvlvyy lsgtinslgs csvnagetie vdlgdvfaan
      241 frvvghkplg artaelaipv rcntgnaglv nvnlsltatt dpnypqaikt srpgvgvvvt
      301 dsqnniispa ggtlplsipd dadsiarmnv ypvsttgvpp etgrfeatat vrinfd
//
LOCUS       WP_258115516             439 aa            linear   BCT 02-MAR-2025
DEFINITION  PTS transporter subunit EIIC [Levilactobacillus yiduensis].
ACCESSION   WP_258115516
VERSION     WP_258115516.1
KEYWORDS    RefSeq.
SOURCE      Levilactobacillus yiduensis
  ORGANISM  Levilactobacillus yiduensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
REFERENCE   1  (residues 1 to 439)
  AUTHORS   Reizer,J., Paulsen,I.T., Reizer,A., Titgemeyer,F. and Saier,M.H.
            Jr.
  TITLE     Novel phosphotransferase system genes revealed by bacterial genome
            analysis: the complete complement of pts genes in mycoplasma
            genitalium
  JOURNAL   Microb Comp Genomics 1 (3), 151-164 (1996)
   PUBMED   9689210
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02378.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Levilactobacillus yiduensis"
                     /db_xref="taxon:2953880"
     Protein         1..439
                     /product="PTS transporter subunit EIIC"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA]"
                     /GO_process="GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /calculated_mol_wt=47492
     Region          16..430
                     /region_name="CelB"
                     /note="Phosphotransferase system cellobiose-specific
                     component IIC [Carbohydrate transport and metabolism];
                     COG1455"
                     /db_xref="CDD:441064"
ORIGIN      
        1 mtgkraplrg lwrlnqrieq wramraikea lrvaypfilv mtlidvvgqg lltksgfffq
       61 iyhvgswlpg lelwrqlfqv islvingiva vmvafttghy lartyrgdal avgvmsalaf
      121 ltlnvnydal ntpvrgngdd ipqfmennlg pqgiflaivv glvvgwfgch lmswlgkwal
      181 khpqwgqlsw tsrvawplvv vltltvgmgy glswlnsggl nglvyqglna lvtnpghrgv
      241 iilavtainn glwwlgligp islagnssvt slqnlayavq hgsgwnapnp itlhtlgday
      301 anfggagmtl alllaiwigs kqasyrrvan qtflpnlvnl neptllglpl lynplllipf
      361 ivapavnivv awcaitwklv ppivypvprt tpgpliaylg tggdwralll sliclalsva
      421 iylpfvrlan laggddhaa
//
LOCUS       WP_258115412             563 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Levilactobacillus
            yiduensis].
ACCESSION   WP_258115412
VERSION     WP_258115412.1
KEYWORDS    RefSeq.
SOURCE      Levilactobacillus yiduensis
  ORGANISM  Levilactobacillus yiduensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
REFERENCE   1  (residues 1 to 563)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 563)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 563)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 563)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Levilactobacillus yiduensis"
                     /db_xref="taxon:2953880"
     Protein         1..563
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=63136
     Region          7..555
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
ORIGIN      
        1 mviitdilyt igittlpaya arivvhpgss ivrvlttiai lslliygahv vgiyfqgkia
       61 qltfdfrfdy vpifskrifs wpqqkidsve gkmiidqaye siynganvgi eavidqtilv
      121 lryslqiisl lvlmgllsiw paivvlslni fgylmqslgn rwyanhknaq nritsyqeyf
      181 srtlmareng kdirlfgmvp lfhhyqknla krlvrweghy stvlagvnil qqlfnlagim
      241 ftllflisek sltianciff ltaiqvmntn fanlrnaytl tsknltfvpn frkfmdteld
      301 latenkqnvi ggfkqltlnr vflklennti lksinlsvsk gdhlivvgen gagksslvkv
      361 lsglygptrg taklngialn sinpqslqaq mtvqfqddil lhftiaenis ctdlkrtnyq
      421 kvnevlrqvh llefvnalpn gietyvgnel sangvlvsgg qkqrllfarv lykqadltil
      481 deptaaldpi seknfyqliq nelatktvif vthrlgsfvk kgkiavmskg kiiaigthdd
      541 llvncelyre mwqaqrslyt vgd
//
LOCUS       WP_258115535             712 aa            linear   BCT 02-MAR-2025
DEFINITION  MucBP domain-containing protein [Levilactobacillus yiduensis].
ACCESSION   WP_258115535
VERSION     WP_258115535.1
KEYWORDS    RefSeq.
SOURCE      Levilactobacillus yiduensis
  ORGANISM  Levilactobacillus yiduensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018196.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06458.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Levilactobacillus yiduensis"
                     /db_xref="taxon:2953880"
     Protein         1..712
                     /product="MucBP domain-containing protein"
                     /calculated_mol_wt=74382
     Region          <1..174
                     /region_name="rne"
                     /note="ribonuclease E; Reviewed; PRK10811"
                     /db_xref="CDD:236766"
     Region          <245..>315
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          247..265
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          279..300
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          301..315
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          459..520
                     /region_name="MucBP"
                     /note="MucBP domain; pfam06458"
                     /db_xref="CDD:461917"
     Region          541..601
                     /region_name="MucBP"
                     /note="MucBP domain; pfam06458"
                     /db_xref="CDD:461917"
ORIGIN      
        1 mkrgrtwvfa slvtatlaig tdrvtaqadt sappvaptaa tgaasqtese vtlsptatqp
       61 tdtatastde ativdenesd ntsnsiadev ttetlatest dpesmdtvns dvtvtvdtet
      121 papavdtkpv aisapvessp qavtgaapql kavklvkaev tkpatvklah qqkaatiddw
      181 mpnttlqqav lkalraqnpg qswasvadit qvdmallktl siqagagtyi dgktdfkldg
      241 lefatnltsf saggnlngtp gayygdiadv tplagleklt sldlqhnrit dvtplaglkn
      301 lrtlylafnr iqdfsvlkgn nyqtfhagsq avvldpikvs atkrsahlkv qfitidgnvi
      361 qlepvavria dpvfynngaf tyrfyftggt gvsdgqggln ytalkdqipg iteypgvtvd
      421 vqennyfmtg kaegndaygs ylfvamqgyd iaeeaaavtv khqdengtal vddvvlpagm
      481 igedyqtapv tipgyklktt panatgkyga dpvtviyvye kegggtvtpp vvtpvedvtm
      541 tidyqladgt tiadsqtisg qpgtayttsp laiagytlva tpdnatgvfg dtdgrivyvy
      601 ektgdetdsg dgdqvidggd gdeitdggdd vvtggsdgpt atenggagdt isgrpihteq
      661 stitsptalp lttqnattlp qtderhtsaw wgvallavtv aggwlgkrrw lk
//
LOCUS       WP_258115541             805 aa            linear   BCT 02-MAR-2025
DEFINITION  BspA family leucine-rich repeat surface protein [Levilactobacillus
            yiduensis].
ACCESSION   WP_258115541
VERSION     WP_258115541.1
KEYWORDS    RefSeq.
SOURCE      Levilactobacillus yiduensis
  ORGANISM  Levilactobacillus yiduensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015347.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03382.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..805
                     /organism="Levilactobacillus yiduensis"
                     /db_xref="taxon:2953880"
     Protein         1..805
                     /product="BspA family leucine-rich repeat surface protein"
                     /calculated_mol_wt=89604
     Region          186..295
                     /region_name="DUF285"
                     /note="Mycoplasma protein of unknown function, DUF285;
                     pfam03382"
                     /db_xref="CDD:427272"
     Region          197..221
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          222..249
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          250..274
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          263..414
                     /region_name="DUF285"
                     /note="Mycoplasma protein of unknown function, DUF285;
                     pfam03382"
                     /db_xref="CDD:427272"
     Region          275..292
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          315..342
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          343..369
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          370..391
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          392..417
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275383"
     Region          665..733
                     /region_name="DUF5776"
                     /note="Domain of unknown function (DUF5776); pfam19087"
                     /db_xref="CDD:465973"
     Region          741..800
                     /region_name="DUF5776"
                     /note="Domain of unknown function (DUF5776); pfam19087"
                     /db_xref="CDD:465973"
ORIGIN      
        1 mlkrkkskvr shlnylwytf arvirtinsv gghnmswekt vavlaglvig iglsggviaa
       61 paseglmtak aagtgqayhg tlgtnctwdl sadgktltia gtgpdgsgtl peananpyfg
      121 sgvlydlitk nsnydalgyl qtiklsgnlk tgksadslfa gfnafygggp islegldtld
      181 thdtvnmkgm fqrssfksld lsnfntqkvt nmssmfndeq qlkkidissf dtdqvtnmhq
      241 mfmgsglssl davldkldms qvtdmggmfg smenltsldv srldtsnvvd msslfdrdkn
      301 lkkitfggkf ntrkvefmgy mfsgltsmtd ldlswidtsd vtsmmymfsg atgltyldls
      361 kfdtknvddf qfmfqgdssl qnvnlssfdt sngtnfwcmf kdctslekld ipnfdvskaf
      421 snvyvsgmnn geqqmfandt sltsldisgf kmteddpwyt ftddmffgde kisrlvlgsg
      481 vrfvtipnts egpqlaniip sadytgawqa vgagteddpr gavykssdal vkayegdtrp
      541 tgvqtyvwqp vnrpvtppvt ppvtptvppr ptpvpdepde vftgsslnai kkigfyrrpt
      601 ftkknritwf akaprtrqpq fvvigkaask hgvaryrvrd vnrhsqtyrl tgyvttraay
      661 veptyvsknt qakritvinp rgingygran ltqkqrhyrq gqqlkvkriv thnlttrfql
      721 pngqyvtanr qwiqtgrras prqiktthti wryrdvnfqk kthhyrrhqq lrilgwdysd
      781 hgtlryrvag gyitantrwv kvvkr
//
LOCUS       WP_258115563             408 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Levilactobacillus yiduensis].
ACCESSION   WP_258115563
VERSION     WP_258115563.1
KEYWORDS    RefSeq.
SOURCE      Levilactobacillus yiduensis
  ORGANISM  Levilactobacillus yiduensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Levilactobacillus yiduensis"
                     /db_xref="taxon:2953880"
     Protein         1..408
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=43324
     Region          24..398
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(34..35,38..39,42,75,125..126,128..130,133,151,
                     154..155,158,235,238..239,242..244,247,274,278,327..328,
                     332,336,351,354..355,358..359,362)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340887"
ORIGIN      
        1 midlaqylqv gggnngmlkl irkmwpllvl gflvntaysv mwplttiylh gdlhlnlvqs
       61 glilaaysgc nvlggylggv ltdrysarrv gvgmligliv dagggffwng lvgypivlvi
      121 fglltggmlt litamtaqls hldgrlfnll yifinvglvv gtasigilyh gslkpifall
      181 lgcyvlaagl waasarhfer qasrqapvsr gktapvtast srlshvqlii illslvfmwv
      241 tyaqwmsnvs vyiqneglgi klysylwvyn gvlliavqaa makfsrskvl pwqilgglva
      301 igssflqlsn hsgvailfva mtlltigeav yvpgvpalin tytvgnegky qglvnafssl
      361 gkalgpvvgg vviaqansfp alfwlcavvd gliaisflvg vvpglqkg
//
LOCUS       WP_258115571             264 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ead/Ea22-like family protein [Escherichia].
ACCESSION   WP_258115571
VERSION     WP_258115571.1
KEYWORDS    RefSeq.
SOURCE      Escherichia
  ORGANISM  Escherichia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025303.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13935.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Escherichia"
                     /db_xref="taxon:561"
     Protein         1..264
                     /product="ead/Ea22-like family protein"
                     /calculated_mol_wt=29413
     Region          2..142
                     /region_name="Ead_Ea22"
                     /note="Ead/Ea22-like protein; pfam13935"
                     /db_xref="CDD:379401"
     Region          202..259
                     /region_name="DUF551"
                     /note="Protein of unknown function (DUF551); pfam04448"
                     /db_xref="CDD:427954"
ORIGIN      
        1 mskidyqalr dkaekatcgv wsleygeerf dagdalihre vvgylpicri egahpesgfd
       61 edfqteqqan aefiaaanpa tvlalldere rnqqyikrrd qeneeialtv gklrveleaa
      121 nkriaeleae pvsqaynlae liegmevsid vstcdadlgn ryfgtvteal eldtakngyi
      181 llvqdaepnf dvngnspvtp dgwiscserm pddgqwcvvn teygyyvqcw segqgwlgdd
      241 isipecdvin wiplpeppqe vnrg
//
LOCUS       WP_258115620             198 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF669 domain-containing protein [Levilactobacillus yiduensis].
ACCESSION   WP_258115620
VERSION     WP_258115620.1
KEYWORDS    RefSeq.
SOURCE      Levilactobacillus yiduensis
  ORGANISM  Levilactobacillus yiduensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016896.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05037.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Levilactobacillus yiduensis"
                     /db_xref="taxon:2953880"
     Protein         1..198
                     /product="DUF669 domain-containing protein"
                     /calculated_mol_wt=21883
     Region          8..139
                     /region_name="DUF669"
                     /note="Protein of unknown function (DUF669); pfam05037"
                     /db_xref="CDD:398629"
     Region          <176..198
                     /region_name="Replication protein A, class 2b
                     aminoacyl-tRNA synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold."
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     cl09930"
                     /db_xref="CDD:471953"
ORIGIN      
        1 madfmntdys nntggdyeal pagnyemiin nakedatkng aetlqidllv rndldkvpdl
       61 aetnakfhnr hifvdnwkrk atnqydldgf qyilqaagvp entplhtvdd fiklisgaav
      121 rvfvkqednt yngttttvnr vapwnfevtq fpqvqhtykd kksgptagkp tpppatntsd
      181 pfantgdsid ipdddlpf
//
LOCUS       WP_258115642             140 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail terminator family protein [Levilactobacillus yiduensis].
ACCESSION   WP_258115642
VERSION     WP_258115642.1
KEYWORDS    RefSeq.
SOURCE      Levilactobacillus yiduensis
  ORGANISM  Levilactobacillus yiduensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF044614.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20765.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Levilactobacillus yiduensis"
                     /db_xref="taxon:2953880"
     Protein         1..140
                     /product="phage tail terminator family protein"
                     /calculated_mol_wt=15976
ORIGIN      
        1 mdiierigql letispgvpi yrenqkggfk epsfyvsaig srgqpelfgr qkrthgyqvv
       61 cfpdpkkqna dmevmeqlll dqfltlpgfa hirdrnfnrv dgtltidfnv vvwahpvddt
      121 pkqekmkqte rvtksdrskn
//
LOCUS       WP_258115661              94 aa            linear   BCT 02-MAR-2025
DEFINITION  holin [Levilactobacillus yiduensis].
ACCESSION   WP_258115661
VERSION     WP_258115661.1
KEYWORDS    RefSeq.
SOURCE      Levilactobacillus yiduensis
  ORGANISM  Levilactobacillus yiduensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
REFERENCE   1  (residues 1 to 94)
  AUTHORS   Grundling,A., Manson,M.D. and Young,R.
  TITLE     Holins kill without warning
  JOURNAL   Proc Natl Acad Sci U S A 98 (16), 9348-9352 (2001)
   PUBMED   11459934
REFERENCE   2  (residues 1 to 94)
  AUTHORS   Loessner,M.J., Wendlinger,G. and Scherer,S.
  TITLE     Heterogeneous endolysins in Listeria monocytogenes bacteriophages:
            a new class of enzymes and evidence for conserved holin genes
            within the siphoviral lysis cassettes
  JOURNAL   Mol Microbiol 16 (6), 1231-1241 (1995)
   PUBMED   8577256
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018631.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06946.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Levilactobacillus yiduensis"
                     /db_xref="taxon:2953880"
     Protein         1..94
                     /product="holin"
                     /calculated_mol_wt=10003
ORIGIN      
        1 mdyiqqlnlg taaelalttl vvfvltqavk qtkvsnqwmp wlsmgvgvvv gllsvfvtad
       61 hnflsgavmg llvggftsgl fdgfkgfqik edhk
//
LOCUS       WP_258115662             253 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5776 domain-containing protein [Levilactobacillus yiduensis].
ACCESSION   WP_258115662
VERSION     WP_258115662.1
KEYWORDS    RefSeq.
SOURCE      Levilactobacillus yiduensis
  ORGANISM  Levilactobacillus yiduensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039855.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19087.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Levilactobacillus yiduensis"
                     /db_xref="taxon:2953880"
     Protein         1..253
                     /product="DUF5776 domain-containing protein"
                     /calculated_mol_wt=27837
     Region          24..180
                     /region_name="CwlA"
                     /note="N-acetylmuramoyl-L-alanine amidase CwlA [Cell
                     wall/membrane/envelope biogenesis]; cl46750"
                     /db_xref="CDD:481090"
     Region          186..249
                     /region_name="DUF5776"
                     /note="Domain of unknown function (DUF5776); pfam19087"
                     /db_xref="CDD:465973"
ORIGIN      
        1 mgysfnrsye laanagdnrk aahkyiiahd tgndnnrgig sgkneasymk ghwsaaytha
       61 ivddqgiyiv gtpgyvayga gtvananspf qvelahvdsq krfnesykry vwvlryyakk
      121 ygipltldga gagikshkwv sdniwgdhqd pygylskwgi skaqfakdlk ngvggsastp
      181 akkatylkaa kqvkaktsit ryhdkafkka ekkftkgtvf dvesvvsygk itrfklgngl
      241 yitsntdyvk klk
//
LOCUS       WP_258115682             224 aa            linear   BCT 02-MAR-2025
DEFINITION  Abi family protein [Levilactobacillus yiduensis].
ACCESSION   WP_258115682
VERSION     WP_258115682.1
KEYWORDS    RefSeq.
SOURCE      Levilactobacillus yiduensis
  ORGANISM  Levilactobacillus yiduensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Garvey,P., Fitzgerald,G.F. and Hill,C.
  TITLE     Cloning and DNA sequence analysis of two abortive infection phage
            resistance determinants from the lactococcal plasmid pNP40
  JOURNAL   Appl Environ Microbiol 61 (12), 4321-4328 (1995)
   PUBMED   8534099
REFERENCE   2  (residues 1 to 224)
  AUTHORS   Bidnenko,E., Ehrlich,D. and Chopin,M.C.
  TITLE     Phage operon involved in sensitivity to the Lactococcus lactis
            abortive infection mechanism AbiD1
  JOURNAL   J Bacteriol 177 (13), 3824-3829 (1995)
   PUBMED   7601849
REFERENCE   3  (residues 1 to 224)
  AUTHORS   Anba,J., Bidnenko,E., Hillier,A., Ehrlich,D. and Chopin,M.C.
  TITLE     Characterization of the lactococcal abiD1 gene coding for phage
            abortive infection
  JOURNAL   J Bacteriol 177 (13), 3818-3823 (1995)
   PUBMED   7601848
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019371.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07751.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Levilactobacillus yiduensis"
                     /db_xref="taxon:2953880"
     Protein         1..224
                     /product="Abi family protein"
                     /calculated_mol_wt=25523
     Region          <6..205
                     /region_name="Abi_2"
                     /note="Abi-like protein; cl01988"
                     /db_xref="CDD:470424"
ORIGIN      
        1 mtlpgnsvat ilgkkygafg ylnfsnwcdr gikrfqveek qfyfkkdllk avkksrnhyv
       61 nvsankndeg fptvwllsnv lmfgniinli simslnnkra lakiygctpd elmswlrcll
      121 fvrntcahns nlidlnlrtq pmvprryksk iletesgysn glaivlliik slmnivnsky
      181 kfgniydsly kiidhegira tsigfasvrs invfkpykkr kkss
//
LOCUS       WP_258115725             229 aa            linear   BCT 02-MAR-2025
DEFINITION  putative HNHc nuclease [Levilactobacillus yiduensis].
ACCESSION   WP_258115725
VERSION     WP_258115725.1
KEYWORDS    RefSeq.
SOURCE      Levilactobacillus yiduensis
  ORGANISM  Levilactobacillus yiduensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028094.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16784.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Levilactobacillus yiduensis"
                     /db_xref="taxon:2953880"
     Protein         1..229
                     /product="putative HNHc nuclease"
                     /calculated_mol_wt=27012
     Region          29..217
                     /region_name="HNHc_6"
                     /note="Putative HNHc nuclease; pfam16784"
                     /db_xref="CDD:293389"
ORIGIN      
        1 mqrsrskyfe rngksyllve ldhqpnldhi etvsgsrdql yldweladtr karpqqrrlf
       61 fallnditdy fvvpqdflka mfygqyreyt ngneislsdt tessvsdanv lldlvidfmf
      121 twrvpfkqgy ellpreqeyy qyqccrhrrc mvcgrehsdi nhvdtvgsgr drnhldhtql
      181 rvnclcrehh tewhkigpta fgekyhipva gikldeetlr kigvrgiyd
//
LOCUS       WP_258115736             706 aa            linear   BCT 02-MAR-2025
DEFINITION  SH3 domain-containing protein [Levilactobacillus yiduensis].
ACCESSION   WP_258115736
VERSION     WP_258115736.1
KEYWORDS    RefSeq.
SOURCE      Levilactobacillus yiduensis
  ORGANISM  Levilactobacillus yiduensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020049.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08460.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Levilactobacillus yiduensis"
                     /db_xref="taxon:2953880"
     Protein         1..706
                     /product="SH3 domain-containing protein"
                     /calculated_mol_wt=76497
     Region          10..>186
                     /region_name="Sipho_tail"
                     /note="Phage tail protein; cl17486"
                     /db_xref="CDD:450183"
     Region          527..590
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
ORIGIN      
        1 mgkvllpvtp aitessqvip arygpvyqgs sygaltinvp vyyltpysql ysvaggqlae
       61 qkirelsaaf idpqeergte ypltfddlpg ytfyahitqi sdpeplndgv sdwsstitfv
      121 csdprgfleq qdwdvadast tavlpvkgnt pvgaiivatf nkdvktftvl kdtgeqstef
      181 iqlggdadvd sgsdgtssdd ktrmlvhdpc ttlstwtaik envnpvstin ldidgamast
      241 daslrvakns dgtynfgkvn theqwygpge lhqalpyspk nwklsvrlhh skysgahnyr
      301 amakvevyil dtkqrtcgri gikdvkgggy pqayvqigsn fangtegkdf knlyygsams
      361 lthtsrpekv kvkykkatky ldnaqmvdaf sdffgqftli kqyvkqadgt tainwgysid
      421 qwdaekavyl stgvhfgknk vayvdtncaf dfdlgtvaff takhditedk akvayknvfq
      481 tmsnyqveel ldaptpattt gstttggsgt astggtppap gttpdkytid akgtftfnaa
      541 vnvrnspdtt gtvaatyaag esvaydrkey tngyywlsyi sysggrryaa yydtagkaiy
      601 gtdsnpvnpv kpdtaassgd sttipdqsat gnsdlsdfdq qvfhagdelh incdtghvfl
      661 nnepadylit pdstffmldg gkdntlafdp sspdvdisvs vrpaiq
//
LOCUS       WP_258115739             272 aa            linear   BCT 02-MAR-2025
DEFINITION  GH25 family lysozyme [Levilactobacillus yiduensis].
ACCESSION   WP_258115739
VERSION     WP_258115739.1
KEYWORDS    RefSeq.
SOURCE      Levilactobacillus yiduensis
  ORGANISM  Levilactobacillus yiduensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
REFERENCE   1  (residues 1 to 272)
  AUTHORS   Moroz,O.V., Blagova,E., Taylor,E., Turkenburg,J.P., Skov,L.K.,
            Gippert,G.P., Schnorr,K.M., Ming,L., Ye,L., Klausen,M., Cohn,M.T.,
            Schmidt,E.G.W., Nymand-Grarup,S., Davies,G.J. and Wilson,K.S.
  TITLE     Fungal GH25 muramidases: New family members with applications in
            animal nutrition and a crystal structure at 0.78A resolution
  JOURNAL   PLoS One 16 (3), e0248190 (2021)
   PUBMED   33711051
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 272)
  AUTHORS   Martinez-Fleites,C., Korczynska,J.E., Davies,G.J., Cope,M.J.,
            Turkenburg,J.P. and Taylor,E.J.
  TITLE     The crystal structure of a family GH25 lysozyme from Bacillus
            anthracis implies a neighboring-group catalytic mechanism with
            retention of anomeric configuration
  JOURNAL   Carbohydr Res 344 (13), 1753-1757 (2009)
   PUBMED   19595298
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013357.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01183.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Levilactobacillus yiduensis"
                     /db_xref="taxon:2953880"
     Protein         1..272
                     /product="GH25 family lysozyme"
                     /GO_function="GO:0003796 - lysozyme activity [Evidence
                     IEA]"
                     /GO_process="GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /GO_process="GO:0016998 - cell wall macromolecule
                     catabolic process [Evidence IEA]"
                     /calculated_mol_wt=30121
     Region          3..180
                     /region_name="GH25_muramidase"
                     /note="Endo-N-acetylmuramidases (muramidases) are
                     lysozymes (also referred to as peptidoglycan hydrolases)
                     that degrade bacterial cell walls by catalyzing the
                     hydrolysis of 1,4-beta-linkages between N-acetylmuramic
                     acid and N-acetyl-D-glucosamine residues; cl10448"
                     /db_xref="CDD:447900"
     Site            order(7,33,62,64,94,96,126,148,166,175)
                     /site_type="active"
                     /db_xref="CDD:119373"
     Region          207..263
                     /region_name="DUF5776"
                     /note="Domain of unknown function (DUF5776); pfam19087"
                     /db_xref="CDD:465973"
ORIGIN      
        1 mtkkivdlss yqadslayik qlkkwgadgi mvkltegtgy lspkagnqia ngfkvfdtvg
       61 vyhffhgrgt aeaqyflawv kkmgldkstv laidveapdl pwkttsqvnv flrylishgy
      121 knvitygsgs wfnagrinrs qlvdkaiwva aygvsqpgva nanawqytdn whgvdcsydf
      181 dgklsgkatk vthkkasywa dnglyevitn hvnvyskpal nkankrrvhf skgstiygka
      241 vkygkvyrik tgvgyisank kyvklvrksg gk
//
LOCUS       WP_258115815             218 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Levilactobacillus yiduensis].
ACCESSION   WP_258115815
VERSION     WP_258115815.1
KEYWORDS    RefSeq.
SOURCE      Levilactobacillus yiduensis
  ORGANISM  Levilactobacillus yiduensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
REFERENCE   1  (residues 1 to 218)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 218)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Levilactobacillus yiduensis"
                     /db_xref="taxon:2953880"
     Protein         1..218
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=23869
     Region          <7..157
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(15,17,19..20,96..97,117,157)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 mtdhhvtlky iylththadh ffgagmikda fpgatiivtr atadgipavm tpanlagtwe
       61 klfpgklptp ivgadqvvkd hftleehpit iisdgftdth dttslwvpdl qlivagdaty
      121 kgihaymqet tlaarqnwik tnehlktfkp qhvvaghkip enaddpaild stiayitafn
      181 kfaqkatsal elyrqvlaly ptyanpgslw ssahavir
//
LOCUS       WP_258115873             157 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-dependent oxidoreductase [Escherichia coli].
ACCESSION   WP_258115873
VERSION     WP_258115873.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Dengler,U., Niefind,K., Kiess,M. and Schomburg,D.
  TITLE     Crystal structure of a ternary complex of D-2-hydroxyisocaproate
            dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate
            at 1.9 A resolution
  JOURNAL   J Mol Biol 267 (3), 640-660 (1997)
   PUBMED   9126843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02826.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..157
                     /product="NAD(P)-dependent oxidoreductase"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
                     /calculated_mol_wt=17131
     Region          <2..154
                     /region_name="PRK07574"
                     /note="NAD-dependent formate dehydrogenase"
                     /db_xref="CDD:181041"
ORIGIN      
        1 mvatqlglty hpdaeslart vdivnlqvpl ypstehffnq kmisemkrgs ylintaraql
       61 vdrdavvnal ksghlagyag dvwfpqpapa shpwrtmpwn gmtphmsgts lsaqaryaag
      121 tleilesflg nspireeyli vdrgqlagtg aksyqln
//
LOCUS       WP_258116031             627 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma 54-interacting transcriptional regulator [Klebsiella
            quasipneumoniae].
ACCESSION   WP_258116031
VERSION     WP_258116031.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (residues 1 to 627)
  AUTHORS   Studholme,D.J. and Dixon,R.
  TITLE     Domain architectures of sigma54-dependent transcriptional
            activators
  JOURNAL   J Bacteriol 185 (6), 1757-1767 (2003)
   PUBMED   12618438
REFERENCE   2  (residues 1 to 627)
  AUTHORS   Chaney,M., Grande,R., Wigneshweraraj,S.R., Cannon,W., Casaz,P.,
            Gallegos,M.T., Schumacher,J., Jones,S., Elderkin,S., Dago,A.E.,
            Morett,E. and Buck,M.
  TITLE     Binding of transcriptional activators to sigma 54 in the presence
            of the transition state analog ADP-aluminum fluoride: insights into
            activator mechanochemical action
  JOURNAL   Genes Dev 15 (17), 2282-2294 (2001)
   PUBMED   11544185
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00158.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..627
                     /product="sigma 54-interacting transcriptional regulator"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008134 - transcription factor binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=70342
     Region          25..189
                     /region_name="PrpR_N"
                     /note="Propionate catabolism activator; pfam06506"
                     /db_xref="CDD:428980"
     Region          199..626
                     /region_name="RocR"
                     /note="RocR-type transcriptional regulator, contains PAS,
                     AAA-type ATPase, and DNA-binding Fis domains
                     [Transcription, Signal transduction mechanisms]; COG3829"
                     /db_xref="CDD:443041"
ORIGIN      
        1 mknneivifs vsstitqrim hvlierklei pvyefrysdv lnkanemiqs gtriiisrgg
       61 taallrnnip ipvieiahdf hgvyrilqea knksqkiaai gfpqfcralr hyqsmtndef
      121 kicqvynhhd ienviknlse ndyhmviggl tvaemakkyn lnviegdadn nsieqainea
      181 hgllkyinre nlklvmshaa lnqsregimc vdqlgeiihi naigmtlfqc qvgdklfkke
      241 vfkdiyasmi nesnvkeqai eingtlvsls vryfsnrhns yavitglsqe stlwqqttsk
      301 kshlrgyats ysfdniiaqs pimhqviqka rlcaqhelpv hilgdtgtgk elfaqsihhv
      361 sarshgpfva lncaaipesl leselfgyae gaftnarkgg kpgvfematn gtvfideise
      421 aplsvqvkll rvlqekqfsr lggdtllsad frlitasnkd lgqlvasgef rqdlyyrini
      481 lelqlpslre rpedimvlih hllqqqnkhl tftadavncl qnydwpgnir elqaviyrli
      541 vlldgntvnk evlqqishls pvchqsvslv sdhtlvades dllkkqekql iasviektdg
      601 drtrasailg ispttlwrkl kqhnisg
//
LOCUS       WP_258116136              65 aa            linear   BCT 02-MAR-2025
DEFINITION  IS1 family transposase, partial [Klebsiella quasipneumoniae].
ACCESSION   WP_258116136
VERSION     WP_258116136.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015750.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03811.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Klebsiella quasipneumoniae"
                     /db_xref="taxon:1463165"
     Protein         1..>65
                     /product="IS1 family transposase"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
     Region          8..>65
                     /region_name="transpos_IS1"
                     /note="IS1 family transposase; NF033558"
                     /db_xref="CDD:468085"
ORIGIN      
        1 mvsvsvfcps csatqgvvrn gkstaghqry lcshclktwq ltftytasqp gthqkiidma
       61 mngvg
//
LOCUS       WP_258114845             117 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Agrobacterium fabrum].
ACCESSION   WP_258114845
VERSION     WP_258114845.1
KEYWORDS    RefSeq.
SOURCE      Agrobacterium fabrum
  ORGANISM  Agrobacterium fabrum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium; Agrobacterium tumefaciens complex.
REFERENCE   1  (residues 1 to 117)
  AUTHORS   Moore,T.C. and Escalante-Semerena,J.C.
  TITLE     The EutQ and EutP proteins are novel acetate kinases involved in
            ethanolamine catabolism: physiological implications for the
            function of the ethanolamine metabolosome in Salmonella enterica
  JOURNAL   Mol Microbiol 99 (3), 497-511 (2016)
   PUBMED   26448059
REFERENCE   2  (residues 1 to 117)
  AUTHORS   Pitts,A.C., Tuck,L.R., Faulds-Pain,A., Lewis,R.J. and
            Marles-Wright,J.
  TITLE     Structural insight into the Clostridium difficile ethanolamine
            utilisation microcompartment
  JOURNAL   PLoS One 7 (10), e48360 (2012)
   PUBMED   23144756
REFERENCE   3  (residues 1 to 117)
  AUTHORS   Serventi,F., Ramazzina,I., Lamberto,I., Puggioni,V., Gatti,R. and
            Percudani,R.
  TITLE     Chemical basis of nitrogen recovery through the ureide pathway:
            formation and hydrolysis of S-ureidoglycine in plants and bacteria
  JOURNAL   ACS Chem Biol 5 (2), 203-214 (2010)
   PUBMED   20038185
REFERENCE   4  (residues 1 to 117)
  AUTHORS   Werner,A.K., Romeis,T. and Witte,C.P.
  TITLE     Ureide catabolism in Arabidopsis thaliana and Escherichia coli
  JOURNAL   Nat Chem Biol 6 (1), 19-21 (2010)
   PUBMED   19935661
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017690.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05899.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Agrobacterium fabrum"
                     /db_xref="taxon:1176649"
     Protein         1..117
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=12259
     Region          <16..113
                     /region_name="EutQ"
                     /note="Ethanolamine utilization protein EutQ, cupin
                     superfamily (function unknown) [Amino acid transport and
                     metabolism]; COG4766"
                     /db_xref="CDD:443798"
ORIGIN      
        1 mkvqkfsisd aelvkspgqd adiyvgnlvd ersggpvsig ygryapgqsl tetmavddtm
       61 ivlegrlsvs tsdgtvtvgp gdivympkgq svtittegeg attafvtyph waearek
//
LOCUS       WP_258116164             197 aa            linear   BCT 02-MAR-2025
DEFINITION  PD-(D/E)XK nuclease family protein, partial [Bacillus
            thuringiensis].
ACCESSION   WP_258116164
VERSION     WP_258116164.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 197)
  AUTHORS   Kinch,L.N., Ginalski,K., Rychlewski,L. and Grishin,N.V.
  TITLE     Identification of novel restriction endonuclease-like fold families
            among hypothetical proteins
  JOURNAL   Nucleic Acids Res 33 (11), 3598-3605 (2005)
   PUBMED   15972856
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024117.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12705.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         <1..197
                     /product="PD-(D/E)XK nuclease family protein"
     Region          <1..197
                     /region_name="addB_Gpos"
                     /note="helicase-exonuclease AddAB, AddB subunit;
                     TIGR02773"
                     /db_xref="CDD:213736"
ORIGIN      
        1 ldlteeyygl alqmltyldv vtsnaqtwmk kghaaspagv lyfhihnpiv emkgdaseae
       61 iekeilkkfk mkglvlgdad vvrlmdnkls tgssdiisag lkkdgsfsar ssiaseqefn
      121 vlqkyvhhtf enigkditeg vidiapykmg nkaactfcnf ksvcqfdesl ednqfrslkd
      181 mkdseameki reevgge
//
LOCUS       WP_258116175             387 aa            linear   BCT 02-MAR-2025
DEFINITION  BclA C-terminal domain-containing protein [Bacillus thuringiensis].
ACCESSION   WP_258116175
VERSION     WP_258116175.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 387)
  AUTHORS   Kirchdoerfer,R.N., Herrin,B.R., Han,B.W., Turnbough,C.L. Jr.,
            Cooper,M.D. and Wilson,I.A.
  TITLE     Variable lymphocyte receptor recognition of the immunodominant
            glycoprotein of Bacillus anthracis spores
  JOURNAL   Structure 20 (3), 479-486 (2012)
   PUBMED   22405006
REFERENCE   2  (residues 1 to 387)
  AUTHORS   Liu,C.Q., Nuttall,S.D., Tran,H., Wilkins,M., Streltsov,V.A. and
            Alderton,M.R.
  TITLE     Construction, crystal structure and application of a recombinant
            protein that lacks the collagen-like region of BclA from Bacillus
            anthracis spores
  JOURNAL   Biotechnol Bioeng 99 (4), 774-782 (2008)
   PUBMED   17879302
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18573.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         1..387
                     /product="BclA C-terminal domain-containing protein"
                     /calculated_mol_wt=34567
     Region          <64..>211
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          259..387
                     /region_name="BclA_C"
                     /note="BclA C-terminal domain; pfam18573"
                     /db_xref="CDD:436587"
ORIGIN      
        1 msswsnning ycgcnnqngv hvdsccfscd gtvpkvgptg ptgatgatgg tgptgatgvt
       61 gdtgptgatg itgatgptga tgitgatgat gptgatgitg atgptgptgp tgatgatgat
      121 gatgptgatg itgatgatgp tgatgitgat gptgatgatg atgptgatgi tgatgatgpt
      181 gptgatgatg ptgatgitga tgatgptgat gitgatgptg atgatgatga tgatgitgat
      241 gatgdtgatg tsitatyafa nntsgtaisv llggtnvplp nnqnigpgit vsggntvfta
      301 anagnyyisy tinitasllv ssritingap lagtinspal attsfsatii ttlaagsais
      361 lqlfgllava tlstttpgav ltiirls
//
LOCUS       WP_258116180            1025 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Bacillus thuringiensis].
ACCESSION   WP_258116180
VERSION     WP_258116180.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024867.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13476.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         1..1025
                     /product="AAA family ATPase"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /GO_process="GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /calculated_mol_wt=119799
     Region          1..1016
                     /region_name="sbcc"
                     /note="exonuclease SbcC; TIGR00618"
                     /db_xref="CDD:129705"
ORIGIN      
        1 mrpiqlimta fgpykqkevi dfedlgehri faisgntgag kttifdaicy vlygeasgee
       61 rsdtsmlrsq fadddvytsv eltfqlkgkr yeikrqlghk kqgnktitgh avelyevidg
      121 envpavdrfh vtdvnkkved liglskhqfs qivmlpqgef rklltseten keeilrrifk
      181 tdryklmrel ldqkrkqwkd vlqekqkere lyfrnvfklp irdgalletl vaqehvnthq
      241 vvealeqett vykaeveqlq veqdvqtkql kdaetrfhvn ekfidlqqkn ekyntlqenr
      301 aaierkeksf kraeqakrll pfeqwyeeam qneqkaesll kqiivkqeqi mnsfelaqek
      361 yevvknkele reeakklvqr leelqaiies laerklnlqn aeiqigklke smhkldqqle
      421 ehtsqkqgms delqqleqal eqyvakveel tnmredakvl kqaydvwqek qkfeqekeaa
      481 nnkmqvavra yenmerrwls eqagilalhl hdgescpvcg stnhpqkate qsnaidekel
      541 ndlrdkknia eklhvqveek wnfyrlqyeq vieevvkrgy nseklaetys alvqkgkqla
      601 advntlkase etrkqiavnm ksveekieel qkqkrevetm qhrtemecmq lrtsyehdkr
      661 nipenlqtvq awkaqldqam qelrlmedew kkvqeayqhw qneniriqae qkgasnqfes
      721 aklkkeetfa rfmreleqsg ftdqftykea klsdaqmeml qkeiqgyyss levlakqiee
      781 lnselkdkey mditslgehi keleinldii kekrqraqna vtyisdlhen irrideqihe
      841 eekafqelvd lyevmkgdne srisferyil ieyleqivqi anerlrklsn gqfylkrser
      901 vekrnrqsgl gldvydaytg qtrdvktlsg gekfnaslcl algmadviqa yeggisietm
      961 fidegfgsld eesltkavda lidlqksgrf igvishvqel knampavlev tkqkdgcsqt
     1021 rfvvk
//
LOCUS       WP_258116244             584 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Aeromonas dhakensis].
ACCESSION   WP_258116244
VERSION     WP_258116244.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024700.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13304.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..584
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=67281
     Region          1..471
                     /region_name="restrict_AAA_1"
                     /note="restriction system-associated AAA family ATPase;
                     TIGR04435"
                     /db_xref="CDD:275228"
ORIGIN      
        1 mrlnkltigs akdspthqfk nlknitidfd ekhwvtvvig wngtgksnvl ealaiifrdl
       61 ialkrmpsfa fklryrmgsg atlrhiyids dpdrtgdpfq fysgsaqdid nvmqvpqhpl
      121 mgytlseitq gphfinnhrv haqeflkeds dylpryvfay ysgegkrmhs iftpyleryd
      181 kklrsgedpg lkrlfyampv hsqfvllafl iqqseiirtf ldehlgldpd egiesvlfvl
      241 rqppwkskap dgdarfwnar gvvrdflsrl ydialapiev srqvstsiwn kktlqfkyly
      301 vkdiealrrl vgdqapaqff rdlestyvse lieevrikvr lkkndgsvtf relsegeqql
      361 ltvlgllrft aedeslflld epdthlnprw svdyisylkq fiasgtnqee tshilltthn
      421 plaiaeldre qvqilrmske neqrqivacy pemaplgmgy aaivtsdmfg iassldqptq
      481 llletqrafa aksllsadeq qeldiinaql nrlgfrffhp ddeysrylrl rneilmarft
      541 vtkprdiadr vlamsrlere qlatklidkl maddddelmd rvdt
//
LOCUS       WP_258116249             460 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ATP-binding protein [Aeromonas].
ACCESSION   WP_258116249
VERSION     WP_258116249.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas
  ORGANISM  Aeromonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae.
REFERENCE   1  (residues 1 to 460)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 460)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 460)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 460)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Aeromonas"
                     /db_xref="taxon:642"
     Protein         1..460
                     /product="ATP-binding protein"
                     /calculated_mol_wt=52356
     Region          <205..454
                     /region_name="PRK10815"
                     /note="two-component system sensor histidine kinase PhoQ"
                     /db_xref="CDD:182754"
ORIGIN      
        1 mdvrllrpmr firrslhikl mlsamlvial imafsvyily lghteeqaqk astrmqenls
       61 klfssklpea rattdlgrit pdavdpnldt licradgqls wssmhmpevi qakdticqdl
      121 mkylggldqd yffklhtikn gesyfiyslr flrnhgdgpt tyyvvmvdsa krylaqtrdy
      181 lhqrirqall aylmlgalll ltsfwslgsl rtmarqmdei ragkrdalsn dyereltplt
      241 esvnqllene rqqtqryqha lndlahslkt rlaliqmtaq evklgrdihd nineqiltmd
      301 qiiqyqlrra vtgrqrlask gtepvpliek llaslakvyr hkklqtrfkf dddvffageq
      361 gdlmelmgnl ldnafkfais eirvtvsrrl drlrieiedd gpgidpgksq qifqrgvrad
      421 sspgqgigla vvteivhsyg gqimvdespl ggarftldlp
//
LOCUS       WP_258116256             668 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar hook-length control protein FliK [Aeromonas dhakensis].
ACCESSION   WP_258116256
VERSION     WP_258116256.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 668)
  AUTHORS   Shibata,S., Takahashi,N., Chevance,F.F., Karlinsey,J.E.,
            Hughes,K.T. and Aizawa,S.
  TITLE     FliK regulates flagellar hook length as an internal ruler
  JOURNAL   Mol Microbiol 64 (5), 1404-1415 (2007)
   PUBMED   17542929
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014207.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02120.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..668
                     /product="flagellar hook-length control protein FliK"
                     /calculated_mol_wt=67733
     Region          63..>469
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          328..>442
                     /region_name="kgd"
                     /note="multifunctional oxoglutarate
                     decarboxylase/oxoglutarate dehydrogenase thiamine
                     pyrophosphate-binding subunit/dihydrolipoyllysine-residue
                     succinyltransferase subunit; cl39092"
                     /db_xref="CDD:476867"
     Region          426..>602
                     /region_name="FliK"
                     /note="Flagellar hook-length control protein FliK [Cell
                     motility]; COG3144"
                     /db_xref="CDD:442378"
     Region          526..602
                     /region_name="T3SS_Flik_C"
                     /note="C-terminal domain of flagellar hook-length control
                     protein FliK and similar domains; cd17470"
                     /db_xref="CDD:350657"
ORIGIN      
        1 mmqtlltnss aaptaatadk savltasqdg segalqsdgk ggfsevmnrv qqagkgnaka
       61 dghvanadgk agsrpgtgpe ragavesdkp lptakgeaak slaneveeaa gaddtpqkgs
      121 dpgpaltpnd flqrlqdalk qdtslvapaa itlvastpvv etdgkmlppd daqaasdeas
      181 atlaqslags gdklgtttaa aalarqaass ltgetsapvd akaaqpdavm tddaalaaql
      241 qeagkegcgk esgagganad qhadkngkda kgsksdlsaa eraalqskvp aaaavsgqdk
      301 envqiqvega dkgakpvvpp mvgkdepakp splqtthstv aaqpgaaraf aegmsradge
      361 anltsekaqp qsvaegdgqs rpataaktes qpapaagstp apaaaqsepv lvapqqvlas
      421 sepqgpqasl aslsaglkqm eatersdsar grsevkvdlk qkaaelargt sqgssettat
      481 pesshsqqvq qnsqpqavgh dnrpataela arrdpanlph lkladpeapa qlhqkvnlml
      541 adklqqaeiq ldplglgkmk iqiqidssnq anvhfvvqhg qtremleqam prlrdmlagq
      601 giqlgqtqvq qqpqqqsqgq sgfsgqgqqg qkgsgsfaet gqteaevtga gmslsrestn
      661 drgidfya
//
LOCUS       WP_258116311             282 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF72 domain-containing protein [Aeromonas dhakensis].
ACCESSION   WP_258116311
VERSION     WP_258116311.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014017.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01904.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..282
                     /product="DUF72 domain-containing protein"
                     /calculated_mol_wt=31699
     Region          3..256
                     /region_name="DUF72"
                     /note="Protein of unknown function DUF72; cl00777"
                     /db_xref="CDD:469916"
ORIGIN      
        1 mslflglpqw shpawpghll gvgakpaehl ahyarvfntv egnttfyasp tpdtvrrwad
       61 avpsdfrfsf kfpqtishqs dlvsadkqvs dfirlltplh dklgllklql parfgpdglp
      121 rlaafferlp tqfnyalevr hpdfftkgea erqlnrllme rginrimlds rplfsvpats
      181 aamidaqgkk prlpvhllat anapvvrlig lphpednhpf lpgwlphwrq wlaegkelyl
      241 fihtadnaqa pelarqvarl lgqemapwpg endrarqgvl pf
//
LOCUS       WP_258116368             256 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2092 domain-containing protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258116368
VERSION     WP_258116368.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021391.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09865.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..256
                     /product="DUF2092 domain-containing protein"
                     /calculated_mol_wt=27662
     Region          5..242
                     /region_name="COG3900"
                     /note="Predicted periplasmic protein [Function unknown]"
                     /db_xref="CDD:443107"
ORIGIN      
        1 mpfqvsaaal vlatglggsa raddaearhl lkamsdylaa qkaisfgydt nlevvtkddq
       61 klllassgav dlarpdkfrg srhggfanve mvfdgktltl lgkdanlytq vdvpgtldhl
      121 vnelrdkyhr pvpgadllls nvydelmrdv tdvkdlgsgv iggtecdhla frtkevdwqi
      181 wiaqgehpyp cryvitsnav dqgpqysiqi sdwktgadva addfafkapd gakkvdlkel
      241 vdfdelpthl spgaak
//
LOCUS       WP_258116398             375 aa            linear   BCT 02-MAR-2025
DEFINITION  multicopper oxidase domain-containing protein [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258116398
VERSION     WP_258116398.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 375)
  AUTHORS   Page,C.C., Moser,C.C., Chen,X. and Dutton,P.L.
  TITLE     Natural engineering principles of electron tunnelling in biological
            oxidation-reduction
  JOURNAL   Nature 402 (6757), 47-52 (1999)
   PUBMED   10573417
REFERENCE   2  (residues 1 to 375)
  AUTHORS   Grossmann,J.G., Ingledew,W.J., Harvey,I., Strange,R.W. and
            Hasnain,S.S.
  TITLE     X-ray absorption studies and homology modeling define the
            structural features that specify the nature of the copper site in
            rusticyanin
  JOURNAL   Biochemistry 34 (26), 8406-8414 (1995)
   PUBMED   7599131
REFERENCE   3  (residues 1 to 375)
  AUTHORS   Messerschmidt,A., Ladenstein,R., Huber,R., Bolognesi,M.,
            Avigliano,L., Petruzzelli,R., Rossi,A. and Finazzi-Agro,A.
  TITLE     Refined crystal structure of ascorbate oxidase at 1.9 A resolution
  JOURNAL   J Mol Biol 224 (1), 179-205 (1992)
   PUBMED   1548698
REFERENCE   4  (residues 1 to 375)
  AUTHORS   Messerschmidt,A. and Huber,R.
  TITLE     The blue oxidases, ascorbate oxidase, laccase and ceruloplasmin.
            Modelling and structural relationships
  JOURNAL   Eur J Biochem 187 (2), 341-352 (1990)
   PUBMED   2404764
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019352.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07732.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..375
                     /product="multicopper oxidase domain-containing protein"
                     /GO_function="GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=41289
     Region          100..219
                     /region_name="CuRO_1_2DMCO_NIR_like"
                     /note="The cupredoxin domain 1 of a two-domain laccase
                     related to nitrite reductase; cd11024"
                     /db_xref="CDD:259910"
     Site            order(114..115,120,129..130,133,159,190..194,203,206..207,
                     211,213,215)
                     /site_type="other"
                     /note="Domain 2 interface [polypeptide binding]"
                     /db_xref="CDD:259910"
     Site            order(157,159..164,189,193,196,198,201..202)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:259910"
     Region          244..372
                     /region_name="Cupredoxin"
                     /note="Cupredoxin superfamily; cl19115"
                     /db_xref="CDD:473140"
ORIGIN      
        1 msevsawfre kisrrgllwg glaaaggsai agtaagqsvh sghgaasaad aapppahlaa
       61 hgsmitvgdv dnerngfdps rivtdwetgs vsklpdgril rtfeieavdk eieiapgimf
      121 pawtyngrvp gpalratege hlrmvfrnsg shphsmhfhg ihaarmdgvp gaglidpgee
      181 fvyefdarpf gchlyhchal plkrhihkgm yglfvidpdp arhpgladva rsrllgtpen
      241 aewqefamvm ngfdtnfdng nevyavntva haymkrpiri vrnrpvriyl anvvefdpin
      301 sfhlhanffd yfeqgttltp tlrtvdlitq vqaqrgilef tykdhetgly mfhphqseft
      361 elgwtgmfdv veava
//
LOCUS       WP_258116408             350 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor domain-containing protein [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258116408
VERSION     WP_258116408.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 350)
  AUTHORS   Buchanan,S.K., Smith,B.S., Venkatramani,L., Xia,D., Esser,L.,
            Palnitkar,M., Chakraborty,R., van der Helm,D. and Deisenhofer,J.
  TITLE     Crystal structure of the outer membrane active transporter FepA
            from Escherichia coli
  JOURNAL   Nat Struct Biol 6 (1), 56-63 (1999)
   PUBMED   9886293
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012801.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..350
                     /product="TonB-dependent receptor domain-containing
                     protein"
                     /calculated_mol_wt=37849
     Region          <10..305
                     /region_name="TonB-hemin"
                     /note="TonB-dependent heme/hemoglobin receptor family
                     protein; TIGR01785"
                     /db_xref="CDD:273807"
ORIGIN      
        1 mndvdleant ftarynitde dkswldlhvn asynktklem tslvpqnrfd pvtglpivlp
       61 agsmstfdvg tsgidiwnts rfetaglahe ltyggdwvgd dvetggaagg dsfytpsgkr
      121 disgayiqdk ltwdwleiia glrydsykle sdvgetsgdr lspritvgvs pfettslsgl
      181 qlygtyaegy rspslsetli sgnhpagvsf pflpnpdlkp etgktvefgi nykqddivea
      241 gdafrfkaay fnndvedyid gvtlsafdpt sgcpfgpgip icfqyqnfak akirgfemeg
      301 iygagwvspg frprssmatp spmtasgqtl lpsplprspg nsasafwrts
//
LOCUS       WP_258116409             244 aa            linear   BCT 02-MAR-2025
DEFINITION  TonB-dependent receptor plug domain-containing protein
            [Mesorhizobium onobrychidis].
ACCESSION   WP_258116409
VERSION     WP_258116409.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 244)
  AUTHORS   Oke,M., Sarra,R., Ghirlando,R., Farnaud,S., Gorringe,A.R.,
            Evans,R.W. and Buchanan,S.K.
  TITLE     The plug domain of a neisserial TonB-dependent transporter retains
            structural integrity in the absence of its transmembrane
            beta-barrel
  JOURNAL   FEBS Lett 564 (3), 294-300 (2004)
   PUBMED   15111112
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019335.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07715.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..244
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /calculated_mol_wt=25339
     Region          55..>204
                     /region_name="TonB-hemin"
                     /note="TonB-dependent heme/hemoglobin receptor family
                     protein; TIGR01785"
                     /db_xref="CDD:273807"
ORIGIN      
        1 maallavaaa ialltpsasa qsanaqqaaq patdqqqteq aqtpeevapa gatlldqilv
       61 isrtgetaid slasashvdq eqlerrmatt pnemllgvpg vavqadarrv sssinirglq
      121 dfgrvavivd garqnfqrsd hgpqstfyid peliksvdvi rgpvantygs gaiggvvlfe
      181 tkdaedylrd getwaasatg ryesmakagr pappaptvst rtgmssatss iatmmttrma
      241 aair
//
LOCUS       WP_258116427             523 aa            linear   BCT 02-MAR-2025
DEFINITION  cytochrome ubiquinol oxidase subunit I [Aeromonas dhakensis].
ACCESSION   WP_258116427
VERSION     WP_258116427.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 523)
  AUTHORS   Juty,N.S., Moshiri,F., Merrick,M., Anthony,C. and Hill,S.
  TITLE     The Klebsiella pneumoniae cytochrome bd' terminal oxidase complex
            and its role in microaerobic nitrogen fixation
  JOURNAL   Microbiology (Reading) 143 (Pt 8), 2673-2683 (1997)
   PUBMED   9274021
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013791.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01654.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..523
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /EC_number="1.10.3.-"
                     /GO_component="GO:0070069 - cytochrome complex [Evidence
                     IEA]"
                     /GO_function="GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /GO_process="GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /calculated_mol_wt=57241
     Region          6..520
                     /region_name="Cyt_bd_oxida_I"
                     /note="Cytochrome bd terminal oxidase subunit I; cl00562"
                     /db_xref="CDD:469822"
ORIGIN      
        1 minpddvvsl srlqfgatam fhflfvpltl glswilviae sayvmtgkvi ykditrfwgk
       61 lfginfvmgv ttgitlefqf gtnwayysqy vgdifgtpla veglmaffle stlvglfffg
      121 wdklsrgqhl lvtmlvalgs nlsalwilig ngwmqnpvga efnlvtqrme lvdvaavifn
      181 pvaqvkfvht vaagyvaasl fvmgvsswyl lrrmevrfal rsfaiasgfg laailsvivl
      241 gdesgyrtge vqkvklaaie aewetepapa aftlfgfpdq gaetthaaik ipylmgiiat
      301 rsldeavtgi kdlkaqhetr irsgmvaaga leqiragnds aenralfdqh gqdlgyglll
      361 tpyasniaka geaeiarave dsvpqvaplf wgfrimvglg vvmlglfvag fvqlcrnrll
      421 asprllkall wsiplpwiai eagwfvaefg rqpwtisdvl pvsasvsllq pgqlwfslis
      481 icliyscllv velfllrrvi rqgpavlhtg ryrgeqpela ria
//
LOCUS       WP_258116529             436 aa            linear   BCT 02-MAR-2025
DEFINITION  O-antigen ligase family protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258116529
VERSION     WP_258116529.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 436)
  AUTHORS   Klena,J.D., Pradel,E. and Schnaitman,C.A.
  TITLE     Comparison of lipopolysaccharide biosynthesis genes rfaK, rfaL,
            rfaY, and rfaZ of Escherichia coli K-12 and Salmonella typhimurium
  JOURNAL   J Bacteriol 174 (14), 4746-4752 (1992)
   PUBMED   1624462
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016800.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04932.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..436
                     /product="O-antigen ligase family protein"
                     /calculated_mol_wt=47251
ORIGIN      
        1 mtspatlsrr kgsepvdlvc shspdvldyt lflsgiwlac alaislrllg pffivipvgv
       61 clayavlrqt vpprllavyt afclfialls ryglmpdswq vhflqeavir qivpivgffa
      121 vawaskayfr rrlmngnaff gapvflflsl vvapavmfqq dvqyqgaspq atipilygsl
      181 innmviaaff iaggifltnd wrryggilll lgialaspla qfkvlavtmi viligvpgrl
      241 maaalatalt sayavglnfi pqtfaldpna girlafisda lasladtygf gigfgkesvr
      301 wryefpgfed itflpdtrni thakmleils tgihnsffqa ilrtgvigfi livsailvaf
      361 ppnrlprgvs nhastvfiti flamfvnpvl espvqivgia fsygylialr asvpalavep
      421 ppfeagrtqh cacsyi
//
LOCUS       WP_258116570             508 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing phosphohydrolase [Aeromonas dhakensis].
ACCESSION   WP_258116570
VERSION     WP_258116570.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 508)
  AUTHORS   Galperin,M.Y. and Chou,S.H.
  TITLE     Sequence Conservation, Domain Architectures, and Phylogenetic
            Distribution of the HD-GYP Type c-di-GMP Phosphodiesterases
  JOURNAL   J Bacteriol 204 (4), e0056121 (2022)
   PUBMED   34928179
REFERENCE   2  (residues 1 to 508)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024878.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13487.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..508
                     /product="HD domain-containing phosphohydrolase"
                     /calculated_mol_wt=56650
     Region          23..131
                     /region_name="PAS_4"
                     /note="PAS fold; pfam08448"
                     /db_xref="CDD:312075"
     Region          233..493
                     /region_name="HDGYP"
                     /note="HD-GYP domain, c-di-GMP phosphodiesterase class II
                     (or its inactivated variant) [Signal transduction
                     mechanisms]; COG2206"
                     /db_xref="CDD:441808"
ORIGIN      
        1 mssrpappft plptaallgq vmdqlpyrvm lkdtrslfia cnrllagdla ltpaelagkc
       61 dadffpaela qryrdddlrv mtsgttqrhe epylkggear wlsttkfplf delgqvvgvg
      121 vffdditekk qqqerlqqyt wtleaigrah hamlrpddeq tllqeicdai tfdgrfplvt
      181 vlqekpdqht lqvlaqagna twfacdewlt rdpalhqais teipcnealp celvhhsatl
      241 rarlllplqw htggrgglli hseqarpftd eevhlfsqla dylayglqar stqqayltaq
      301 rdkmlharql elaledalga iaavleqrdp ytaghqkhva tlalaigrel qldekrlrgl
      361 ylgamvhdig kiqvpvdilt kpgrltpqef nlvkehpgag yqvlkdialp wpiaqmihqh
      421 heyidgsgyp aglkgeqill eariltvadi vesmssdrpy raalgipqar ahiiqlrgtr
      481 ldeavvdacl rildrgdfip helghgrp
//
LOCUS       WP_258116637             200 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258116637
VERSION     WP_258116637.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024824.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13432.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..200
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=21429
     Region          4..>131
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          5..29
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(36,39..40,43..44,46,70,73..74,77..78,80..81,104,
                     107..108,111..112,115)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          36..63
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          68..98
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          103..131
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mggalqeaar fhkkgwviqa envyrqilnt epthdqalyg lghvlgtkgd hrqaaecfga
       61 laamspqsvn awlclgiaqq slndhsaaie sfgratdldp gltlaryarg rsllalqrtd
      121 eaaqaftlvl engspapaet alrakarrql qqlrtakply ilkkperetp viqssvplgl
      181 tnllkvarpa tasrsissva
//
LOCUS       WP_258116646              82 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF982 domain-containing protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258116646
VERSION     WP_258116646.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 82)
  AUTHORS   Rigden,D.J.
  TITLE     Ab initio modeling led annotation suggests nucleic acid binding
            function for many DUFs
  JOURNAL   OMICS 15 (7-8), 431-438 (2011)
   PUBMED   21348639
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017934.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06169.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..82
                     /product="DUF982 domain-containing protein"
                     /calculated_mol_wt=9009
ORIGIN      
        1 malhwfhppv iietvrpglt ygcnnvegaa aelmrwtkrg pkwkeaveac maliegertp
       61 ddvrkafeaa aeeegllrss sn
//
LOCUS       WP_258116649             471 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Aeromonas dhakensis].
ACCESSION   WP_258116649
VERSION     WP_258116649.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 471)
  AUTHORS   Mande,S.S., Sarfaty,S., Allen,M.D., Perham,R.N. and Hol,W.G.
  TITLE     Protein-protein interactions in the pyruvate dehydrogenase
            multienzyme complex: dihydrolipoamide dehydrogenase complexed with
            the binding domain of dihydrolipoamide acetyltransferase
  JOURNAL   Structure 4 (3), 277-286 (1996)
   PUBMED   8805537
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019604.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07992.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..471
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=51670
     Region          6..471
                     /region_name="PRK11749"
                     /note="dihydropyrimidine dehydrogenase subunit A;
                     Provisional; cl46914"
                     /db_xref="CDD:481254"
ORIGIN      
        1 msqnvfqfid vqrvdppkkp lkirkiqfve iyesfnqaqv gmqadrcldc gnpycewkcp
       61 vhnyipnwlk lanegrilea velshqtnsl pevcgrvcpq drlcegsctl ndrfgavtig
      121 niekyitdka femgwkpdls nvvktgkrva vigagpagla cadvlarngv tpvvfdkype
      181 igglltfgip sfklekevmq rrreifegmg vefrletevg rdvtfadllg efdavflgvg
      241 tykymkggfa neeapgvyda lpylisnanr llgfekaqad yidfagkqvv vlgggdtamd
      301 cvrtairqga drvicayrrd aenmpgskre vknaqeegve fmfnlqpigv eldahgrtcg
      361 ikvvstelga pdangrrnpv viegseqvla adavvmafgf qpnpqpwmae ygieldgrdr
      421 ikapeqaeya fqtsnpkvfa ggdavrgsdl vvtaiyegrk aaegimdyla v
//
LOCUS       WP_258116654             527 aa            linear   BCT 02-MAR-2025
DEFINITION  CHASE4 domain-containing protein [Aeromonas dhakensis].
ACCESSION   WP_258116654
VERSION     WP_258116654.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 527)
  AUTHORS   Zhulin,I.B., Nikolskaya,A.N. and Galperin,M.Y.
  TITLE     Common extracellular sensory domains in transmembrane receptors for
            diverse signal transduction pathways in bacteria and archaea
  JOURNAL   J Bacteriol 185 (1), 285-294 (2003)
   PUBMED   12486065
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017078.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05228.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..527
                     /product="CHASE4 domain-containing protein"
                     /calculated_mol_wt=58963
     Region          27..>392
                     /region_name="CHASE4"
                     /note="Extracellular (periplasmic) sensor domain CHASE
                     (specificity unknown) [Signal transduction mechanisms];
                     COG3322"
                     /db_xref="CDD:442551"
     Region          371..515
                     /region_name="GAF"
                     /note="GAF domain; pfam01590"
                     /db_xref="CDD:460259"
ORIGIN      
        1 mkisrkitlt ivltlllllg vgyvglhyvv gnkfgelerl svernrervr avvqaeldql
       61 tilgqdwsew ddtyaymasr dpaylaanln artfetlavd lvalydadkq pqvafayhgg
      121 klleqtpdel apltdylvry gslkpnggiw fdgeryylla atqilssege gpsrgtllll
      181 kafntrlvhq lqkrtnlsls flspqqlats lgvttlarlr andslilpqe erlltlaqid
      241 tlreedplif rftlprdlml egkaverrif wllslgvllf gglvllilng yiaarlqrls
      301 anlrligedg avrrllvegs deisqvavdc nrmldhldsl rqqqadsear qklqhgalih
      361 laksdlltge dpgqaarhin eaicagtgav rasvwfsaed rqsmycqdlf flpklhhqqg
      421 fhlpyaliqg ryesskpehe pclilrepyd ltrfgamlaq lgleglsgti lmaplkhgde
      481 llgfiiaera rleevwhpde lafvlsvcdl saqtlltltk lqrlkys
//
LOCUS       WP_258116899             346 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD:protein FMN transferase [Aeromonas dhakensis].
ACCESSION   WP_258116899
VERSION     WP_258116899.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 346)
  AUTHORS   Bertsova,Y.V., Fadeeva,M.S., Kostyrko,V.A., Serebryakova,M.V.,
            Baykov,A.A. and Bogachev,A.V.
  TITLE     Alternative pyrimidine biosynthesis protein ApbE is a flavin
            transferase catalyzing covalent attachment of FMN to a threonine
            residue in bacterial flavoproteins
  JOURNAL   J Biol Chem 288 (20), 14276-14286 (2013)
   PUBMED   23558683
REFERENCE   2  (residues 1 to 346)
  AUTHORS   Han,G.W., Sri Krishna,S., Schwarzenbacher,R., McMullan,D.,
            Ginalski,K., Elsliger,M.A., Brittain,S.M., Abdubek,P.,
            Agarwalla,S., Ambing,E., Astakhova,T., Axelrod,H., Canaves,J.M.,
            Chiu,H.J., DiDonato,M., Grzechnik,S.K., Hale,J., Hampton,E.,
            Haugen,J., Jaroszewski,L., Jin,K.K., Klock,H.E., Knuth,M.W.,
            Koesema,E., Kreusch,A., Kuhn,P., Miller,M.D., Morse,A.T., Moy,K.,
            Nigoghossian,E., Oommachen,S., Ouyang,J., Paulsen,J., Quijano,K.,
            Reyes,R., Rife,C., Spraggon,G., Stevens,R.C., van den Bedem,H.,
            Velasquez,J., Wang,X., West,B., White,A., Wolf,G., Xu,Q.,
            Hodgson,K.O., Wooley,J., Deacon,A.M., Godzik,A., Lesley,S.A. and
            Wilson,I.A.
  TITLE     Crystal structure of the ApbE protein (TM1553) from Thermotoga
            maritima at 1.58 A resolution
  JOURNAL   Proteins 64 (4), 1083-1090 (2006)
   PUBMED   16779835
REFERENCE   3  (residues 1 to 346)
  AUTHORS   Beck,B.J. and Downs,D.M.
  TITLE     A periplasmic location is essential for the role of the ApbE
            lipoprotein in thiamine synthesis in Salmonella typhimurium
  JOURNAL   J Bacteriol 181 (23), 7285-7290 (1999)
   PUBMED   10572132
REFERENCE   4  (residues 1 to 346)
  AUTHORS   Beck,B.J. and Downs,D.M.
  TITLE     The apbE gene encodes a lipoprotein involved in thiamine synthesis
            in Salmonella typhimurium
  JOURNAL   J Bacteriol 180 (4), 885-891 (1998)
   PUBMED   9473043
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014477.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02424.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..346
                     /product="FAD:protein FMN transferase"
                     /GO_process="GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /calculated_mol_wt=36778
     Region          22..345
                     /region_name="PRK10461"
                     /note="thiamine biosynthesis lipoprotein ApbE;
                     Provisional"
                     /db_xref="CDD:182478"
ORIGIN      
        1 msllarpapr gllltlllml tacqpaptqt riqgktmgty yavtlsdpfp ggepalqqev
       61 dallarmnhe istydpnsli srfnqgsgqp pmaipatmak ivqqgidagh ltkgkldvtv
      121 gplvnlwgfg pdkrpikrps aeqiasarqk vgidrltltp egdhfllgkg ipdlyldlst
      181 lgegaasdei aglleqkgvh nylievagav rskgnnakgk pwrvaiveps dqpgafsdvv
      241 ipngmalsta gsyrnyyeld gqryshiidp atgqpithkl vsasvitpta leadaldtal
      301 mvmgpeqama farahglavy livkteqgfa ashtpqfapy lvakqp
//
LOCUS       WP_258116935             297 aa            linear   BCT 02-MAR-2025
DEFINITION  DHHA2 domain-containing protein [Aeromonas dhakensis].
ACCESSION   WP_258116935
VERSION     WP_258116935.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 297)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     A novel family of predicted phosphoesterases includes Drosophila
            prune protein and bacterial RecJ exonuclease
  JOURNAL   Trends Biochem Sci 23 (1), 17-19 (1998)
   PUBMED   9478130
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014848.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02833.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..297
                     /product="DHHA2 domain-containing protein"
                     /GO_component="GO:0005737 - cytoplasm [Evidence IEA]"
                     /GO_function="GO:0016462 - pyrophosphatase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=31869
     Region          1..294
                     /region_name="PRK05427"
                     /note="putative manganese-dependent inorganic
                     pyrophosphatase; Provisional"
                     /db_xref="CDD:235458"
ORIGIN      
        1 mlhvfghknp dsdsictalv aadwlnrqgr paqayalgep iaetrfilet agvaappllq
       61 gsvankevfl vdfseleqgp dglaeadvqg lidhhrigtl itrgpldawi ravgcsatvl
      121 lelmgyhtls raqarlllga iisdtfslts ptttardraa vhallpltdl alepfaqtll
      181 errtqlgdap mtellaadek ayriagyqls vsqicvmdpg qlhsrqaele qamqlrlaed
      241 gldayvlmlt dlaqggsqlh fasngilpsh piqligavsr kkeglpwlts ylagkpl
//
LOCUS       WP_258116914             811 aa            linear   BCT 02-MAR-2025
DEFINITION  diguanylate cyclase domain-containing protein [Aeromonas
            dhakensis].
ACCESSION   WP_258116914
VERSION     WP_258116914.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 811)
  AUTHORS   Levet-Paulo,M., Lazzaroni,J.C., Gilbert,C., Atlan,D., Doublet,P.
            and Vianney,A.
  TITLE     The atypical two-component sensor kinase Lpl0330 from Legionella
            pneumophila controls the bifunctional diguanylate
            cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic
            dimeric GMP synthesis
  JOURNAL   J Biol Chem 286 (36), 31136-31144 (2011)
   PUBMED   21757706
REFERENCE   2  (residues 1 to 811)
  AUTHORS   De,N., Pirruccello,M., Krasteva,P.V., Bae,N., Raghavan,R.V. and
            Sondermann,H.
  TITLE     Phosphorylation-independent regulation of the diguanylate cyclase
            WspR
  JOURNAL   PLoS Biol 6 (3), e67 (2008)
   PUBMED   18366254
REFERENCE   3  (residues 1 to 811)
  AUTHORS   Christen,B., Christen,M., Paul,R., Schmid,F., Folcher,M., Jenoe,P.,
            Meuwly,M. and Jenal,U.
  TITLE     Allosteric control of cyclic di-GMP signaling
  JOURNAL   J Biol Chem 281 (42), 32015-32024 (2006)
   PUBMED   16923812
REFERENCE   4  (residues 1 to 811)
  AUTHORS   Chan,C., Paul,R., Samoray,D., Amiot,N.C., Giese,B., Jenal,U. and
            Schirmer,T.
  TITLE     Structural basis of activity and allosteric control of diguanylate
            cyclase
  JOURNAL   Proc Natl Acad Sci U S A 101 (49), 17084-17089 (2004)
   PUBMED   15569936
REFERENCE   5  (residues 1 to 811)
  AUTHORS   Galperin,M.Y.
  TITLE     Bacterial signal transduction network in a genomic perspective
  JOURNAL   Environ Microbiol 6 (6), 552-567 (2004)
   PUBMED   15142243
REFERENCE   6  (residues 1 to 811)
  AUTHORS   Jenal,U.
  TITLE     Cyclic di-guanosine-monophosphate comes of age: a novel secondary
            messenger involved in modulating cell surface structures in
            bacteria?
  JOURNAL   Curr Opin Microbiol 7 (2), 185-191 (2004)
   PUBMED   15063857
REFERENCE   7  (residues 1 to 811)
  AUTHORS   Paul,R., Weiser,S., Amiot,N.C., Chan,C., Schirmer,T., Giese,B. and
            Jenal,U.
  TITLE     Cell cycle-dependent dynamic localization of a bacterial response
            regulator with a novel di-guanylate cyclase output domain
  JOURNAL   Genes Dev 18 (6), 715-727 (2004)
   PUBMED   15075296
REFERENCE   8  (residues 1 to 811)
  AUTHORS   Galperin,M.Y., Nikolskaya,A.N. and Koonin,E.V.
  TITLE     Novel domains of the prokaryotic two-component signal transduction
            systems
  JOURNAL   FEMS Microbiol Lett 203 (1), 11-21 (2001)
   PUBMED   11557134
  REMARK    Erratum:[FEMS Microbiol Lett 2001 Oct 16;204(1):213-4]
REFERENCE   9  (residues 1 to 811)
  AUTHORS   Pei,J. and Grishin,N.V.
  TITLE     GGDEF domain is homologous to adenylyl cyclase
  JOURNAL   Proteins 42 (2), 210-216 (2001)
   PUBMED   11119645
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013180.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00990.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..811
                     /product="diguanylate cyclase domain-containing protein"
                     /EC_number="2.7.7.65"
                     /calculated_mol_wt=92571
     Region          15..311
                     /region_name="TauA"
                     /note="ABC-type nitrate/sulfonate/bicarbonate transport
                     system, periplasmic component [Inorganic ion transport and
                     metabolism]; COG0715"
                     /db_xref="CDD:440479"
     Region          267..>676
                     /region_name="COG5001"
                     /note="Cyclic di-GMP metabolism protein, combines GGDEF
                     and EAL domains with a 6TM membrane domain [Signal
                     transduction mechanisms]"
                     /db_xref="CDD:444025"
     Region          682..811
                     /region_name="COG2703"
                     /note="Hemerythrin [Signal transduction mechanisms]"
                     /db_xref="CDD:442023"
ORIGIN      
        1 msvvnsslhr llwylpmlgs amfcaffspp skavidkvtv qlpwqhqfqf agyyaaqakg
       61 fyraagldvt lrpamtgtdv vnevmsgnaq fgisgsdlll arasgqpivv lasmlqhspl
      121 vlltlerpdi rqpadlagkr lmlepgsqel qiylnrhtpp eswikqpyrq glkallagkt
      181 daisaystte pfylakmgip yrvfsprsid fdfygdnlft serelssrpe rvyafqqatl
      241 kgwryamdnp aemidwivtk ypsgagrdll qfeadttrel mqpdlvepgy mqperwqqia
      301 rnyldaglls alpdlehfly npdrerirqq rqlldksvav amlitlsllt llgifcylyl
      361 rlrqeargrq rltrelaqse qhyrfvaens adviwtmdtt tlrfryvspa iqplsgydpt
      421 dvltlplrql ipetsrkqlr aelsgslaaw qrgdheqtrc virtqlrhke ghlvatetit
      481 tlhgneqgqp dailgvtrdi teraareemm rrlafydplt nlpnrrllqq rlkevmegkv
      541 aqlallfidl dhfkpindtf ghetgdvlln mvaermrhcv rerdlvarlg gdefvillpd
      601 tgdealtvad hlhqrlrhpf rideeqelri sssigvalyp ehgtdpktlm hhadqamyqa
      661 kgrgrgrvcl ytagldpeqg slvwqsshec ghpridaehr qlfvltnrll ehmkdhqehp
      721 alflecmenl fdvarhhftf eeqvlaelgy peftshqqdh qlllqkadql mtaaragtlg
      781 ndellnfiiq elvvghmsqa drryfplmkg r
//
LOCUS       WP_258116952            1083 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Aeromonas dhakensis].
ACCESSION   WP_258116952
VERSION     WP_258116952.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 1083)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..1083
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=118840
     Region          32..1074
                     /region_name="PRK09959"
                     /note="acid-sensing system histidine kinase EvgS"
                     /db_xref="CDD:182169"
ORIGIN      
        1 mnlirplllc lllplcaqal tlhsrpylqs tpapastadq pwlaemtalr vgvlrhdyrp
       61 famigpddhf egiaadyldi laralqkpvk lrafndtrsa laalragdld lvnlgnlnlg
      121 aaeqagials rryfssapvf salaaeqgpl llpgqrvatv rgyvneaafk ryypdlvlvn
      181 ypsnvaafda vffgheplll sdphslhyln serfdkirqr sqaqpaiaad gfrfavsaah
      241 pgllalldqt legvsdvtrs lifnqwngpi rdiierpsdl ysreerawla sagpvkvwlm
      301 ddlypygvrd ydnqltgmsv emlekiskrs glrfefvsyg seqarkeall rgeldligai
      361 srpvaegyrl rpslpyatdd iyvlvarkgd alsgdlaqla gkrvgstiyn piarglgdsq
      421 vsflesadea meavnegrld aaivplyfaq haveggrlqq iriagpaddq pirmgfaglp
      481 anrmlmdiid ktilsiapne lammsyqwrn rklpaptfme rnapyfylll aglcavalll
      541 fyrnrmlnrl arseqasrrq leehvrfiea lgeslphpiv vrdkggkvil cnskylatln
      601 apiervlgts faeglkgllg aeaiaaleqd fqqvlrsgsp ilsdrifsqr gprqfvyhwm
      661 vpyfdyrgai sgvingwidi terktmeeal rrakeqadra sraksdflat msheirtpmn
      721 ailgmlelas qdpalarhtg eqlriasesa nglldligdv ldissieagq ltlapepcel
      781 apllhsvara ckgmaeqkgl gyrvelpplp rvlidplrlr qivfnllgna ikftergevs
      841 lqasltgste qpllhliird sgvgiapdkl pglfspfyra hdpyqfagtg lglniarmlc
      901 qlmggkiavs selgsgtelr irlpltplaa plepldaasp pagpllvpsp rpfaptplrv
      961 lvvddnhanq vllrqqlkhl ghevcvrgng aealqasqsq pfdlvitdcq mplmdgfelt
     1021 rrlrarghtl piwgftahat arerelclaa gmddclykpi glarlrtals tleqssasaq
     1081 pql
//
LOCUS       WP_258117051             709 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma 54-interacting transcriptional regulator [Aeromonas
            dhakensis].
ACCESSION   WP_258117051
VERSION     WP_258117051.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 709)
  AUTHORS   Studholme,D.J. and Dixon,R.
  TITLE     Domain architectures of sigma54-dependent transcriptional
            activators
  JOURNAL   J Bacteriol 185 (6), 1757-1767 (2003)
   PUBMED   12618438
REFERENCE   2  (residues 1 to 709)
  AUTHORS   Chaney,M., Grande,R., Wigneshweraraj,S.R., Cannon,W., Casaz,P.,
            Gallegos,M.T., Schumacher,J., Jones,S., Elderkin,S., Dago,A.E.,
            Morett,E. and Buck,M.
  TITLE     Binding of transcriptional activators to sigma 54 in the presence
            of the transition state analog ADP-aluminum fluoride: insights into
            activator mechanochemical action
  JOURNAL   Genes Dev 15 (17), 2282-2294 (2001)
   PUBMED   11544185
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00158.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..709
                     /product="sigma 54-interacting transcriptional regulator"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008134 - transcription factor binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=78955
     Region          10..700
                     /region_name="PRK15429"
                     /note="formate hydrogenlyase transcriptional activator
                     FlhA"
                     /db_xref="CDD:237965"
ORIGIN      
        1 mlnvsaiplt dispiwddgf lslsknllsa vtlddfikkl nriqpcfrqv drvnlilnlg
       61 tgeeavfyyl gvqgpahlic rkadlhfsre qaivlpasrf rhrceqlast pvydglhsyc
      121 qlpittarsh lggvefisre anafpmetla kltqlaaiva ialenvldke rtleqanslr
      181 lerdsckilv dvtnaviklv riaelpqslf tilhhhvgis slclaeynat sdsfksylvn
      241 qqqreqpgii nhscfekncl qgalghsepf flyreqghgc qsscrftsqi lppdadssci
      301 lplryrgnll gvlilshpea dffadldisl leqvaartai amnnvqaqqe isnttgarek
      361 tlrvdgpapq gdfaniiyqs avmekvlekv klvaqsdctv lilgetgtgk eliaqaihal
      421 sarhdhemvk vncaaiptgl iesdlfghek gaftgaltqr igrferahkg tlfldevgdm
      481 pldlqpkllr vlqehelerv gnsnpiaidv rlvaatncdl lsmvknkrfr sdlyyrlnvf
      541 pielpplrer redipllvnf fikkiakrmr rtitsipada mkmlvslpwy gnirelenii
      601 eravvmtrgh vlnlspdell plkgfhkiet lvydeparel freplpalpq gdeaqgeder
      661 vsiiralkac ngivagerga aqrlgmkrtt llskmkrlgi sakdprtln
//
LOCUS       WP_258117084             213 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Aeromonas
            dhakensis].
ACCESSION   WP_258117084
VERSION     WP_258117084.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 213)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 213)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 213)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 213)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..213
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=23758
     Region          1..208
                     /region_name="DppF"
                     /note="ABC-type dipeptide/oligopeptide/nickel transport
                     system, ATPase component [Amino acid transport and
                     metabolism, Inorganic ion transport and metabolism];
                     COG1124"
                     /db_xref="CDD:440741"
ORIGIN      
        1 mlelrnltia qgerplwqgl sltvkagerl gisapsghgk ttlgrvlagw qpvgaggqil
       61 ldgqpvperv kgynpiqlvp qhpeltfnpy ritgqalwdv wrpddamlar fmvkpewlgr
      121 kpgqlsggel ariallrald prtrlliade vtaqldpqiq rqlwrelmve ceqrglamli
      181 fshqqallrq vchrvlrfge emaeqelvvc nva
//
LOCUS       WP_258117116             474 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent oxidoreductase [Aeromonas dhakensis].
ACCESSION   WP_258117116
VERSION     WP_258117116.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 474)
  AUTHORS   Tavladoraki,P., Schinina,M.E., Cecconi,F., Di Agostino,S.,
            Manera,F., Rea,G., Mariottini,P., Federico,R. and Angelini,R.
  TITLE     Maize polyamine oxidase: primary structure from protein and cDNA
            sequencing
  JOURNAL   FEBS Lett 426 (1), 62-66 (1998)
   PUBMED   9598979
REFERENCE   2  (residues 1 to 474)
  AUTHORS   Tsugeno,Y. and Ito,A.
  TITLE     A key amino acid responsible for substrate selectivity of monoamine
            oxidase A and B
  JOURNAL   J Biol Chem 272 (22), 14033-14036 (1997)
   PUBMED   9162023
REFERENCE   3  (residues 1 to 474)
  AUTHORS   Schilling,B. and Lerch,K.
  TITLE     Cloning, sequencing and heterologous expression of the monoamine
            oxidase gene from Aspergillus niger
  JOURNAL   Mol Gen Genet 247 (4), 430-438 (1995)
   PUBMED   7770050
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..474
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=53347
     Region          3..471
                     /region_name="PRK07208"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:235967"
ORIGIN      
        1 msdnntqhia vlgagpaglm aawrlrqagf avtlfeqesv vggmcatqtf kgrdgeyrfd
       61 ygghrfitkn pellafidel mgddllhaer ksvirfggrt ydyplnlpnl lktaplalma
      121 gavkdllllp farkptdfak asfaewiqsh fgrtlyrqff egytgklwgi npdqlsadwa
      181 gqrislidlk dvarrllprr ngsisvrtya rkyrypkygf gqifttlger lvaegallkt
      241 gatitrleqa ggriervyws qdnveqserf dqvistlplp ltcqhlglpc dlhyrslrfv
      301 nmplkqenls dntwqylsdp hilatrlqep rrrspfmapq gqtsvmleip cnpgdatwqa
      361 plsdlrgrvt tdlaslgvdt aklgdetfea rseyayplmd lgyqarrnqa ikalmpitnl
      421 imtgrqgtfr yiftdtamem gmmaadmvid gvdrrhaifn hrnentviet qsva
//
LOCUS       WP_258117143             399 aa            linear   BCT 02-MAR-2025
DEFINITION  beta-propeller fold lactonase family protein [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258117143
VERSION     WP_258117143.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 399)
  AUTHORS   Kajander,T., Merckel,M.C., Thompson,A., Deacon,A.M., Mazur,P.,
            Kozarich,J.W. and Goldman,A.
  TITLE     The structure of Neurospora crassa 3-carboxy-cis,cis-muconate
            lactonizing enzyme, a beta propeller cycloisomerase
  JOURNAL   Structure 10 (4), 483-492 (2002)
   PUBMED   11937053
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021778.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10282.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..399
                     /product="beta-propeller fold lactonase family protein"
                     /calculated_mol_wt=43236
     Region          41..354
                     /region_name="Pgl"
                     /note="6-phosphogluconolactonase, cycloisomerase 2 family
                     [Carbohydrate transport and metabolism]; COG2706"
                     /db_xref="CDD:442025"
ORIGIN      
        1 msdvdmvptv yetgelgppd phyrdtlsii tsptersrsv alkevsnsty gppgaldvsl
       61 dgqfvfvaet frqrseratr ldelqqgdti rslqfdgghs avadsvrigi qpqaihlnpa
      121 gdliaaitad aeheltfvpv regrfgqass fglglepstg fiplkatwvq whpsgryvgv
      181 nlvdrgqvaf yevlrgedga vsairpwgnr iqtnkfpfvg rfspdgryyi tsdvqwgidt
      241 agfygvqegi lttvrladvg ttgdaarhtv phialggwga etiafspdgr flvtsnlrgt
      301 gkqdgsrdwt ehaslslyql dsetgrlsph gewplagvlp qglafdrtgq klfvgvnryr
      361 neeaplggav eiwqittdgr palaptsdri rlptgvhtr
//
LOCUS       WP_258117195             187 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF899 family protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258117195
VERSION     WP_258117195.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017771.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05988.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..187
                     /product="DUF899 family protein"
                     /calculated_mol_wt=21517
     Region          10..183
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 mniselrypn esneyrdara allkdeqeli dkvksvaekr rnlppggqlk edyvfqwand
       61 gkvgtsvkfs elfadkntll lysfmfgpnw dkpcpsctsl vdgfdrswyq vtqsgasfva
      121 iakapaerin awakqrgwsq iwlvsgsesp yqadykcqgd tddmqwpvmh vfmkrdgrif
      181 hfwelkr
//
LOCUS       WP_258117186              94 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF982 domain-containing protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258117186
VERSION     WP_258117186.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 94)
  AUTHORS   Rigden,D.J.
  TITLE     Ab initio modeling led annotation suggests nucleic acid binding
            function for many DUFs
  JOURNAL   OMICS 15 (7-8), 431-438 (2011)
   PUBMED   21348639
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017934.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06169.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..94
                     /product="DUF982 domain-containing protein"
                     /calculated_mol_wt=10146
ORIGIN      
        1 maafipitvy lnhkpmvvas iadaemalqq pwplmekpsr leairmieec laghcshqaa
       61 faafkaaase qgllkrkrps aglkkfdgva edli
//
LOCUS       WP_258117203             380 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258117203
VERSION     WP_258117203.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..380
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=42070
     Region          77..350
                     /region_name="PRK09685"
                     /note="DNA-binding transcriptional activator FeaR;
                     Provisional"
                     /db_xref="CDD:236612"
ORIGIN      
        1 mdakrqdkal arqalqrdrr rwpreaqsyn eaapslapal eplpfstlel apedqfvawq
       61 ahmaplveik lpddkslddg fpadhtawnl ggmlivqqra pahsymrsaa klrsssidhw
      121 yialphtgrs wtevdrrvae nqpgkleirs lgypfrgrat esqslflylp rdlfadaaat
      181 ldaknnsils gnfanllldy lnsiearlrs vtaddlpriv hatrsmiiac lsppaehaaa
      241 teqlvsvalm erarryvhnn ldaahltpds mcralgvsrs rlyqlfepsg gvlhyiqsrr
      301 llaahvalsd padsrrivni aeavgfssaa nfsrafskef gysprevrss vvlprpahsv
      361 shagheeass fehwlkalgs
//
LOCUS       WP_258117278             143 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Aeromonas dhakensis].
ACCESSION   WP_258117278
VERSION     WP_258117278.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 143)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..143
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=14908
     Region          <2..>142
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            42..75
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 mletsahins svsevtrqie nlnqqsrsie siistissia dqtnllalna aieaarageq
       61 grgfavvade vrqlaartst stgeivsvir lnsditsrit qtvsvvseka magqaqadii
      121 agviqeiied ansvsetvkg lsi
//
LOCUS       WP_258117336             405 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Aeromonas dhakensis].
ACCESSION   WP_258117336
VERSION     WP_258117336.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..405
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=43639
     Region          13..387
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(23..24,27..28,31,64,114..115,117..119,122,143,
                     146..147,150,222,225..226,229..231,234,263,267,318..319,
                     323,327,343,346..347,350..351,354)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 mswallkqfp plvwtvilgt fmvrtsyymv wpflsillyr eyglsattig amlgataais
       61 tlvsfyggwl sdklgrrnil lagclvsvlc ygllgfshsv fwlgfgvlgs glssglidap
      121 gkalmadsla sakarelalh lryfllnlga algpllgvtl ginaqqqtfl llsssylllg
      181 aaflwgfaqs rvavtrgnel glrvaikvlw rdrgflllvl anllmnlvys qfhsplvqyl
      241 tragtpevas liailvatna ltvvllqfpl lhllarwpgk vrlqvgitlf lgaqvlfalg
      301 dpqqwshwig avlmlsvget ilfpllnvli dqmspphlkg syfgagalag lggaigallg
      361 gwllaqwsgq llyalmaqlc lltfllyewg ariprpelar anpgq
//
LOCUS       WP_258117416             663 aa            linear   BCT 02-MAR-2025
DEFINITION  SIR2 family protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258117416
VERSION     WP_258117416.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024685.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13289.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..663
                     /product="SIR2 family protein"
                     /calculated_mol_wt=75065
     Region          21..272
                     /region_name="SIR2"
                     /note="SIR2 superfamily of proteins includes silent
                     information regulator 2 (Sir2) enzymes which catalyze
                     NAD+-dependent protein/histone deacetylation, where the
                     acetyl group from the lysine epsilon-amino group is
                     transferred to the ADP-ribose moiety of NAD+; cl00195"
                     /db_xref="CDD:444738"
ORIGIN      
        1 mrfvengpni pdlllerrdq grvvflcgag vsfnagmptf vgltkhvihs fdppkgsaia
       61 ssfgpwedae yhgsktpldq ifhllhqeyg redvnalvae rlrqgapgev eslehkliar
      121 issdqegnpq ivttnfdrlf ehavgvevgk vyeppafpdi rmgvpvtgvt ylhgrlqepg
      181 aahhpyilss adfgraylse gwatsfirsl lesytvvlvg yqaedppvky llqglnhdgm
      241 sdrsnlyafd kglaeeieak wrdrgvsaia yndhsdlwqc leawaerand prawrsklvd
      301 larrgprnva ayergqvahl vrttpgarlf anadpsppae wlcvfdafcr askkssgyge
      361 daetfdplet ygldddpprp pesdrqtqrl hdhllewrrg dtnpptfhrl agrqpegfed
      421 ipprlfhlvr wiikllhspv tawwalrqng lhpsltegvr relrrrsdlh qqarrnwnli
      481 lefqsdhrnf kwdhgwfelk drinsegwst svlrqfeals apilsrnlpl gidasmppfg
      541 swdelgskel aswavkfadt hgekikvpde vlesvfriae shlrrasgll eelnrtfftt
      601 ltcypgreid gedrdrdgda nfrqflglfa rmveyrpall rahapsrgql ttnttfessn
      661 csr
//
LOCUS       WP_258117464             212 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Aeromonas dhakensis].
ACCESSION   WP_258117464
VERSION     WP_258117464.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12697.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..212
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=23465
     Region          12..206
                     /region_name="Abhydrolase_11"
                     /note="Alpha/beta hydrolase domain; pfam20408"
                     /db_xref="CDD:466557"
ORIGIN      
        1 mhevsregav dapvrillah gagagmehaf laelsrllag peievvrfnf pymskraldg
       61 krrppdrqpv lldhwrqmik efahprlfla gksmggrmaa elyqesedem naagllilgy
      121 pfhppakpdr wrgevlkqik tptlllqger dtfgtraelt dfpfssavsv hwltdgdhgf
      181 kprkssgase qgnlcqaaer ikdfiatipa rg
//
LOCUS       WP_258117563             349 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1176 domain-containing protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258117563
VERSION     WP_258117563.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018389.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06674.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..349
                     /product="DUF1176 domain-containing protein"
                     /calculated_mol_wt=38038
     Region          <139..327
                     /region_name="DUF1176"
                     /note="Protein of unknown function (DUF1176); pfam06674"
                     /db_xref="CDD:461982"
ORIGIN      
        1 mrsalfaata ffslavtgqp vlaaeapyvd drsdaeavir slysainrqe farawdyfgd
       61 tkpakdfdaf vkgydgterv dvktggvsdd gaagsiyynv pvairatakd gsenvfagcy
      121 tlrqvnaqiq eplfrpifid kgalkpskad fedavpescg dgppppkkda aleqakkafa
      181 atygdqcdke mpggeplaep dayslrykda gaetdepere trlfrffcsm aaynesavyy
      241 vyddvsgvrq lqfaspeldi hyennnsegk veainvvgfe tddqlvnsey ddatktissl
      301 nkwrgvgdas sagtylfrng nfslvqydvd asydgeinpq tvvdyntap
//
LOCUS       WP_258117604             334 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Aeromonas dhakensis].
ACCESSION   WP_258117604
VERSION     WP_258117604.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 334)
  AUTHORS   Swint-Kruse,L. and Matthews,K.S.
  TITLE     Allostery in the LacI/GalR family: variations on a theme
  JOURNAL   Curr Opin Microbiol 12 (2), 129-137 (2009)
   PUBMED   19269243
REFERENCE   2  (residues 1 to 334)
  AUTHORS   Fukami-Kobayashi,K., Tateno,Y. and Nishikawa,K.
  TITLE     Parallel evolution of ligand specificity between LacI/GalR family
            repressors and periplasmic sugar-binding proteins
  JOURNAL   Mol Biol Evol 20 (2), 267-277 (2003)
   PUBMED   12598694
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13377.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..334
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=36390
     Region          1..334
                     /region_name="PRK10703"
                     /note="HTH-type transcriptional repressor PurR"
                     /db_xref="CDD:236739"
ORIGIN      
        1 manikevaal agvstttvsh vinetrfvae etrervfsam relnyapslv arslkvketn
       61 sigmlvttss npffaevvrg verycfeqgy nlmlgntegq aetalsylkm mlrkrvdgll
      121 imcsegqqev fnqldwlksl pvvvmdwgme sadvdliadn shrggylatr hllglghtai
      181 gcitgphsra panqrqagfe qamleagltv nphwvqegdf dcasghqamr rllalperpt
      241 alfvcndmma mgaisaahqa glviprdlsi vgydnvalae fmspplttvn qpkeelgrla
      301 vtrllaring ealadhlitv dpdlvirdsc aprp
//
LOCUS       WP_258117609             155 aa            linear   BCT 02-MAR-2025
DEFINITION  Ail/Lom family outer membrane beta-barrel protein, partial
            [Escherichia coli].
ACCESSION   WP_258117609
VERSION     WP_258117609.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 155)
  AUTHORS   Miller,V.L., Beer,K.B., Heusipp,G., Young,B.M. and Wachtel,M.R.
  TITLE     Identification of regions of Ail required for the invasion and
            serum resistance phenotypes
  JOURNAL   Mol Microbiol 41 (5), 1053-1062 (2001)
   PUBMED   11555286
REFERENCE   2  (residues 1 to 155)
  AUTHORS   Barondess,J.J. and Beckwith,J.
  TITLE     A bacterial virulence determinant encoded by lysogenic coliphage
            lambda
  JOURNAL   Nature 346 (6287), 871-874 (1990)
   PUBMED   2144037
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06316.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>155
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /GO_component="GO:0044384 - host outer membrane [Evidence
                     IEA]"
     Region          1..155
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 lsaaiclavs gapawasehq stlsagylha rtnvsgsddl nginvkyrye ftdtlgmvts
       61 fsyagdknrq ltrysdtrwh edsarnrwfs vmagpsvrvn ewfsayamag vaysrvstfs
      121 gdylrvtdnk gkthdvltgs ddgrhsntsl awgag
//
LOCUS       WP_258117617             120 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: helix-turn-helix domain-containing protein
            [Aeromonas].
ACCESSION   WP_258117617
VERSION     WP_258117617.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas
  ORGANISM  Aeromonas
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae.
REFERENCE   1  (residues 1 to 120)
  AUTHORS   Ren,J., Sainsbury,S., Nettleship,J.E., Saunders,N.J. and Owens,R.J.
  TITLE     The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals
            a novel protein fold incorporating a helix-turn-helix motif
  JOURNAL   Proteins 78 (7), 1798-1802 (2010)
   PUBMED   20196080
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013540.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01381.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Aeromonas"
                     /db_xref="taxon:642"
     Protein         1..120
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=12923
     Region          1..>87
                     /region_name="DUF3693"
                     /note="Phage related protein; cl22943"
                     /db_xref="CDD:451460"
ORIGIN      
        1 mdskaliqay mraknfsqyq qvaaelgftk shisslttgk vqltdatakr laqeigldvq
       61 evllslaavr etdpelkkaw ydilakytkg agtavalaaa vflapshghd ltahnvyyvk
//
LOCUS       WP_258117665            1314 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Aeromonas dhakensis].
ACCESSION   WP_258117665
VERSION     WP_258117665.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 1314)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 1314)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 1314)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 1314)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1314
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..1314
                     /product="ATP-binding protein"
                     /calculated_mol_wt=146617
     Region          41..220
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Region          132..1312
                     /region_name="PRK09959"
                     /note="acid-sensing system histidine kinase EvgS"
                     /db_xref="CDD:182169"
     Region          670..994
                     /region_name="BaeS"
                     /note="Signal transduction histidine kinase [Signal
                     transduction mechanisms]; COG0642"
                     /db_xref="CDD:440407"
ORIGIN      
        1 mlglllaapl qamdlplstt akafadatks lticypalir ppyldesggl lvdqmerlae
       61 qlpfpliyqk lpnwsavrsg llegrcdlip nvgpslealp gmalsramle aesailyrge
      121 leqarflvsp iwqanevlra lyphstqqpl teadnwyaal aagkgtaylg dylqlrylmr
      181 eypdtglrlr rlrsdelvvs yrlmmrdkpa lrelidtair ylppgslyqd ldrylaqgeq
      241 dinplhftdk eqawlvgtss aiklvvnpdl mpysgldeqg dlkgwsadvl klvsqqtgln
      301 fhviptasre ealaklrsge admmvgllet paltdafdft rimavsryal vsrktqpfet
      361 laavkgriav patlydeeml trlegthhwr ksdtlaagia avqsgaadam laelyqlqyp
      421 lrnnqldgle vrelpqrfgl gfaisrhspr lagvmeqslm tltgkqnddl klrwhrlvlt
      481 qqagvsygiw lgsvllalli sagviwliwr srqqlarevs qrqameqtla lesqfreslf
      541 qalpvpvflr dnqgeiikrn kqakrleary laelhlpqaq lqesegemal gdqvysyaqi
      601 plqlgkqspa gdlialsnis alrertrllr qaerrlralt ntvpgvviqf llheegirqv
      661 efisrgsyel lglasqqirr npgealgrla pqdkvemqqp mremlqagqp fsyalryqhp
      721 lkgtrwlqfy grgrslpeqg wrvygvvqdv tvrveqeqal qasheraeqa vlakgrflaa
      781 vsheirtpmn ailgllewis htplnaeqhs alshvrqagd ellgllndvl dfsrnenrql
      841 alspqptdlv dlcehvaavh wskarskrlq lrldldhrlp aqveldphrv qqvlhnllan
      901 aikfssrgev vlwarrdgtq llcgvddegp gisaellprl flpfeqggee gqpraqgtgl
      961 glaicrqlme qmggeirvep rttggsrftc alplvllqem prwrprvssv hvaldgaerd
     1021 yllpwlgeld lpddpagpvl sarqdeqglr ywdwqgepwv pgsvvslmqp rlvpsaqgmi
     1081 tlpgqgmrvl lvedhevnrv lismqltqlg aqvisaangq laldmlqhet vdlvltdlqm
     1141 pvmdgaelcr rlrdsprwqh lptyvitadl sepaaaqlas cgcrghldkp lllkdlanll
     1201 rtlgdpapep npeqkaaapa swseaqmpll tpelislyle atgqdladie rcvtqadema
     1261 leaalhkmkg aakmvgatpl vqvieqwkrd prqpllpplr qaldevcrrl rerl
//
LOCUS       WP_258117697             140 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258117697
VERSION     WP_258117697.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 140)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 140)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..140
                     /product="VOC family protein"
                     /calculated_mol_wt=14982
     Region          7..125
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 meprisiiti avddleratr fyeamgltrh agitdgvaff qmgcvilglf presaeadsg
       61 itfgtapsai ylayntrsdt evdhvlamae kaggrivkpa grafwggwyg yfadteghvw
      121 evahnpafpi aedgsislpg
//
LOCUS       WP_258117829             140 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6163 family protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258117829
VERSION     WP_258117829.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039363.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19660.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..140
                     /product="DUF6163 family protein"
                     /calculated_mol_wt=15952
     Region          14..140
                     /region_name="DUF6163"
                     /note="Family of unknown function (DUF6163); pfam19660"
                     /db_xref="CDD:437492"
ORIGIN      
        1 msevtsrrvv lqpstvevif awfqrvvsay cllfgilywi rligfypgpl wrfdlmpvhw
       61 qvaavtlavf fpfaaaglwm laswgpviwf icaatetimy agfpelfghr plivashaav
      121 allyivfrva iwmqkrqarq
//
LOCUS       WP_258117387             232 aa            linear   BCT 02-MAR-2025
DEFINITION  DAPG hydrolase family protein [Aeromonas dhakensis].
ACCESSION   WP_258117387
VERSION     WP_258117387.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 232)
  AUTHORS   He,Y.X., Huang,L., Xue,Y., Fei,X., Teng,Y.B., Rubin-Pitel,S.B.,
            Zhao,H. and Zhou,C.Z.
  TITLE     Crystal structure and computational analyses provide insights into
            the catalytic mechanism of 2,4-diacetylphloroglucinol hydrolase
            PhlG from Pseudomonas fluorescens
  JOURNAL   J Biol Chem 285 (7), 4603-4611 (2010)
   PUBMED   20018877
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF036707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18089.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..232
                     /product="DAPG hydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=26443
     Region          12..220
                     /region_name="DAPG_hydrolase"
                     /note="DAPG hydrolase PhiG domain; pfam18089"
                     /db_xref="CDD:465645"
ORIGIN      
        1 mntsallapw gvndinellr pqplrlemgl trsteglltv airtdlhgck grmldwwftf
       61 fettqhirww hphdhvehrg wdhhwkrger yvgasiaave wlaelppvaa rlkfhsaeev
      121 fapqplqear etqalsaaic arigfgdevv ldengapldg emlhlardtp ygcvlrsrfl
      181 lgkactnpld evpdeigfnl mrhcysefsy laqflpslyy aengrelapr lw
//
LOCUS       WP_258117842             132 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6950 family protein [Aeromonas dhakensis].
ACCESSION   WP_258117842
VERSION     WP_258117842.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046717.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22262.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..132
                     /product="DUF6950 family protein"
                     /calculated_mol_wt=14962
ORIGIN      
        1 mdelihkyrg hqrapstlcc ftmllewvds qdsrqgleli agrfktilga krvlpqilnh
       61 pdldsfmian gvelidyrfm qdgdllvvdg shtliyfggy ffgvmsnqvf dfidantvln
      121 anskkqayrk ik
//
LOCUS       WP_258117845             323 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl transferase family 90 [Mesorhizobium onobrychidis].
ACCESSION   WP_258117845
VERSION     WP_258117845.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05686.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..323
                     /product="glycosyl transferase family 90"
                     /calculated_mol_wt=36902
     Region          <145..276
                     /region_name="Glyco_transf_90"
                     /note="Glycosyl transferase family 90; cl23835"
                     /db_xref="CDD:329112"
ORIGIN      
        1 matlqrnaqk lfyyarnavr diapqalfrr rlaglldqar lsdgsvrarl nyynrlqdaf
       61 apsagavpvs rlprgrsmyy ydlkeftryf dpdlridlef gdvvevpamp sivkdrpiag
      121 dnrngvlfkl nkfrhfhmpa ddvafadklp vavwrgelnn pirtllleaa rdlpfcdvgt
      181 pkptaapayr kpylsidqqr rcryiisleg ndvatnlkwi mssnslclmp pptyetwfae
      241 sdlvanvhyv plepdftdla ervqylerhp teaeriiaaa naycrkfade raeqaicllv
      301 lykyfvlsgq iepdpevwrf isg
//
LOCUS       WP_258117876             644 aa            linear   BCT 02-MAR-2025
DEFINITION  sigma 54-interacting transcriptional regulator [Aeromonas
            dhakensis].
ACCESSION   WP_258117876
VERSION     WP_258117876.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 644)
  AUTHORS   Studholme,D.J. and Dixon,R.
  TITLE     Domain architectures of sigma54-dependent transcriptional
            activators
  JOURNAL   J Bacteriol 185 (6), 1757-1767 (2003)
   PUBMED   12618438
REFERENCE   2  (residues 1 to 644)
  AUTHORS   Chaney,M., Grande,R., Wigneshweraraj,S.R., Cannon,W., Casaz,P.,
            Gallegos,M.T., Schumacher,J., Jones,S., Elderkin,S., Dago,A.E.,
            Morett,E. and Buck,M.
  TITLE     Binding of transcriptional activators to sigma 54 in the presence
            of the transition state analog ADP-aluminum fluoride: insights into
            activator mechanochemical action
  JOURNAL   Genes Dev 15 (17), 2282-2294 (2001)
   PUBMED   11544185
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012385.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00158.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..644
                     /product="sigma 54-interacting transcriptional regulator"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0008134 - transcription factor binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=70643
     Region          <62..137
                     /region_name="GAF_2"
                     /note="GAF domain; cl21515"
                     /db_xref="CDD:473894"
     Region          159..640
                     /region_name="RocR"
                     /note="RocR-type transcriptional regulator, contains PAS,
                     AAA-type ATPase, and DNA-binding Fis domains
                     [Transcription, Signal transduction mechanisms]; COG3829"
                     /db_xref="CDD:443041"
ORIGIN      
        1 mmsvsnqcll mqiqptilrf akmlasvlql eveivdanmv rvagtgpygk ffgrqlegds
       61 rllryviehq rekivthtse dpvcegcsck escreraflg vpimveenci gvislvafnp
      121 eqqarlnnnl qevcdyvqhi ssifvaklld srglsdgvnk vflslmnhmd qgcllldeks
      181 qllyaneval kqlncqqeal lgceiglrpl tfaqqgltgh lqhivtlgdr qeliigqlhh
      241 vqgqqlflma fhqshgtpnp plepdegvtm ligeskpmra lkkllhrial spssvlvcge
      301 sgtgkevvar aihrlsprrd kpfiaincaa ipeqllesel fgyvkgaftg asstgkqgli
      361 qaaqqgtlfl deigdmpltm qakllrvlel revtpigasr pvpvdiriia athqhleqyi
      421 aegkfredlf yrlnvipihl pplrerggdv allthyflnl htsrigllyp glspevmall
      481 egyrwpgnvr elsnlieylv nvvqagevie sillppnilr nqrsgadepp rstvqiarmp
      541 lspdpyshgv ladpalspaa gnpasaagtp wsspeaslpe paagqvergl vlplgengle
      601 nmekqmieet llrlgnkkla aqalgigiat lyrkikkyei avqa
//
LOCUS       WP_258117896             310 aa            linear   BCT 02-MAR-2025
DEFINITION  lysylphosphatidylglycerol synthase domain-containing protein
            [Mesorhizobium onobrychidis].
ACCESSION   WP_258117896
VERSION     WP_258117896.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 310)
  AUTHORS   Staubitz,P., Neumann,H., Schneider,T., Wiedemann,I. and Peschel,A.
  TITLE     MprF-mediated biosynthesis of lysylphosphatidylglycerol, an
            important determinant in staphylococcal defensin resistance
  JOURNAL   FEMS Microbiol Lett 231 (1), 67-71 (2004)
   PUBMED   14769468
REFERENCE   2  (residues 1 to 310)
  AUTHORS   Kristian,S.A., Durr,M., Van Strijp,J.A., Neumeister,B. and
            Peschel,A.
  TITLE     MprF-mediated lysinylation of phospholipids in Staphylococcus
            aureus leads to protection against oxygen-independent neutrophil
            killing
  JOURNAL   Infect Immun 71 (1), 546-549 (2003)
   PUBMED   12496209
REFERENCE   3  (residues 1 to 310)
  AUTHORS   Peschel,A., Jack,R.W., Otto,M., Collins,L.V., Staubitz,P.,
            Nicholson,G., Kalbacher,H., Nieuwenhuizen,W.F., Jung,G.,
            Tarkowski,A., van Kessel,K.P. and van Strijp,J.A.
  TITLE     Staphylococcus aureus resistance to human defensins and evasion of
            neutrophil killing via the novel virulence factor MprF is based on
            modification of membrane lipids with l-lysine
  JOURNAL   J Exp Med 193 (9), 1067-1076 (2001)
   PUBMED   11342591
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015651.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03706.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..310
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /calculated_mol_wt=33487
     Region          4..>308
                     /region_name="bifunc_MprF"
                     /note="bifunctional lysylphosphatidylglycerol
                     flippase/synthetase MprF; NF033480"
                     /db_xref="CDD:468043"
ORIGIN      
        1 mnwrryfwpv vgiaavvfsl wlllhelrgi slddvwdgiv aipargwvla alssviayas
       61 lagydhiall higrrvswlf vtlcsfttya lshniggsvf sgaviryray gtrgligqdv
      121 gilvaicwit fvlstilvsg lvlvfepeii drfsgvphhg ltmaagvaml llvaayvfgs
      181 wlhlrplkig sfqihypalp ivarqlligp iellaaaaii ffalpvsgnp gyfvvlgvfl
      241 vsfsiaqish apgglgvfev vflaglshmd pvgvlaallv frlfyliipl lialgvvlyf
      301 ehsqlgrgen
//
LOCUS       WP_258117969             308 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258117969
VERSION     WP_258117969.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 308)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..308
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=33779
     Region          10..271
                     /region_name="PRK11139"
                     /note="DNA-binding transcriptional activator GcvA;
                     Provisional"
                     /db_xref="CDD:182990"
ORIGIN      
        1 mdhssdailp letlrafdaa artgsfsaaa eklnithgav srqiakledw lglkvfdrga
       61 rgvsltiegn rlhlrtteaf alissnsdrw veprgtavvr ltsipsvsgl wlmprmaale
      121 nnpsklrivl dvdirqadla ddgidlsirc grgripgrvs vqlfeehvfp vaspdlarei
      181 grgdparllk fplindsdas awrawfaaqd mdyrpraqdr rfedynlvld aaahglgial
      241 arppmiehql ksgrivavdd rivlspisyw ldrptgrpra aaaelarria aqaglaaeki
      301 eefivaeq
//
LOCUS       WP_258117991             297 aa            linear   BCT 02-MAR-2025
DEFINITION  HNH endonuclease [Mesorhizobium onobrychidis].
ACCESSION   WP_258117991
VERSION     WP_258117991.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024783.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13391.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..297
                     /product="HNH endonuclease"
                     /calculated_mol_wt=33818
     Region          <28..131
                     /region_name="EVE-like"
                     /note="EVE and YTH domains belong to the PUA superfamily;
                     cl42428"
                     /db_xref="CDD:455773"
     Region          158..296
                     /region_name="COG3440"
                     /note="Predicted restriction endonuclease [Defense
                     mechanisms]"
                     /db_xref="CDD:442665"
ORIGIN      
        1 mgfgvfihrs dsryndrpee qyqfpsqylr rveacvgdwi iyyepskvne trgyfaigkv
       61 qevipdpvtp dmylaliepg syldffnpvp fngtdglver gllndqgris graqsavrpi
      121 spadfnriid lgqdmnelll prvdeagtgf hdeqapfefe qsrdrvnyig srivrdrifr
      181 rivlrayder caitglklin gggraevsaa hirpveangp dvinngials gtahwmfdrg
      241 lislsddlei lisrqvndle smqafinktr ralppgrpfe rphprflqwh rehcfkq
//
LOCUS       WP_258118002             233 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Mesorhizobium onobrychidis].
ACCESSION   WP_258118002
VERSION     WP_258118002.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 233)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..233
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=25519
     Region          4..230
                     /region_name="ompR"
                     /note="osmolarity response regulator; Provisional;
                     PRK09468"
                     /db_xref="CDD:181883"
ORIGIN      
        1 madiivvdde tdlafmiady lqakgyrvrm asggaelrea iaaatvdlvv ldlnmpgeng
       61 fslarwlreh hdtgilmltg adsvfdkvag levgaddyla kpfspvelea riaavlrrrr
      121 pkrsndadal pagqfafgty vfdararnli dadgvaiplt pmeldlvaaf atragqvigr
      181 delldlappr gdepfdrsid sritrlrrrl ekdpakpeli ktirgvgyly pkr
//
LOCUS       WP_258118036             178 aa            linear   BCT 02-MAR-2025
DEFINITION  LysE family transporter [Aeromonas dhakensis].
ACCESSION   WP_258118036
VERSION     WP_258118036.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 178)
  AUTHORS   Aleshin,V.V., Zakataeva,N.P. and Livshits,V.A.
  TITLE     A new family of amino-acid-efflux proteins
  JOURNAL   Trends Biochem Sci 24 (4), 133-135 (1999)
   PUBMED   10322417
REFERENCE   2  (residues 1 to 178)
  AUTHORS   Vrljic,M., Sahm,H. and Eggeling,L.
  TITLE     A new type of transporter with a new type of cellular function:
            L-lysine export from Corynebacterium glutamicum
  JOURNAL   Mol Microbiol 22 (5), 815-826 (1996)
   PUBMED   8971704
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013933.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01810.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..178
                     /product="LysE family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /calculated_mol_wt=19357
     Region          1..178
                     /region_name="LysE"
                     /note="LysE type translocator; cl00565"
                     /db_xref="CDD:444980"
ORIGIN      
        1 msrsiedgiv qaryniiglq lallvhliiv svglgafias semafdgiky iggsyliylg
       61 vmkiknsgns vlrnaemqsg klksladgfv vnitnpksiv flvaflpqfv dssgssyqyf
      121 klglfiiivd ciamfsyasl anvllrylsd plhlkrlnli fgavfiilav mllmsgrh
//
LOCUS       WP_258117357             239 aa            linear   BCT 02-MAR-2025
DEFINITION  disulfide isomerase DsbC N-terminal domain-containing protein
            [Aeromonas dhakensis].
ACCESSION   WP_258117357
VERSION     WP_258117357.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 239)
  AUTHORS   Hiniker,A., Collet,J.F. and Bardwell,J.C.
  TITLE     Copper stress causes an in vivo requirement for the Escherichia
            coli disulfide isomerase DsbC
  JOURNAL   J Biol Chem 280 (40), 33785-33791 (2005)
   PUBMED   16087673
REFERENCE   2  (residues 1 to 239)
  AUTHORS   McCarthy,A.A., Haebel,P.W., Torronen,A., Rybin,V., Baker,E.N. and
            Metcalf,P.
  TITLE     Crystal structure of the protein disulfide bond isomerase, DsbC,
            from Escherichia coli
  JOURNAL   Nat Struct Biol 7 (3), 196-199 (2000)
   PUBMED   10700276
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021896.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10411.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..239
                     /product="disulfide isomerase DsbC N-terminal
                     domain-containing protein"
                     /calculated_mol_wt=26188
     Region          40..224
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
ORIGIN      
        1 mhylllgmml lgsfavsagm dpqllkqtie rrlgvqvylv detpvsglyl lgtaqgplyt
       61 dargdhvllg tmldlahdmk nltmlgqrqq rqlalaqige rrmqlkavpe rhrltlftdl
      121 acrgcratld elsalqargv svqllpvlgp fadlaeaqar wcdpgllrel elsdrlpesg
      181 cneilahhig lsqwlgikvl pswvlpngdl lrgyqspeql lkildhidap antsssarg
//
LOCUS       WP_258118128             255 aa            linear   BCT 02-MAR-2025
DEFINITION  YbaY family lipoprotein [Mesorhizobium onobrychidis].
ACCESSION   WP_258118128
VERSION     WP_258118128.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021158.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09619.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..255
                     /product="YbaY family lipoprotein"
                     /calculated_mol_wt=26879
     Region          1..138
                     /region_name="YbaY"
                     /note="Uncharacterized lipoprotein YbaY [Function
                     unknown]; COG3126"
                     /db_xref="CDD:442360"
     Region          141..250
                     /region_name="HslJ"
                     /note="Heat shock protein HslJ [Posttranslational
                     modification, protein turnover, chaperones]; COG3187"
                     /db_xref="CDD:442420"
ORIGIN      
        1 mlgriaalfi fgvmplvvgi lvvpalsvaa ektlkgeviy rerialppna vlsvqladvs
       61 ltdapaavig ehkvapagqv pikfeisfdp qvirpdttya lqaritvddr llftsgmshq
      121 vdplsdapqt imlkmvtsse qpptapvfgq swlveyidgi gviaepqatf rideagkagg
      181 sgpcnvyfat akvdgstiai gdigstfkac aseimaeeka lfealakaas yhvdagklii
      241 vdkddrvilr fnaas
//
LOCUS       WP_258118196             287 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258118196
VERSION     WP_258118196.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 287)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..287
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=30257
     Region          4..278
                     /region_name="PRK15092"
                     /note="DNA-binding transcriptional repressor LrhA;
                     Provisional"
                     /db_xref="CDD:237907"
ORIGIN      
        1 mqtldadllk tflafvdsgs laqaasivgr spsavtaqmq rledivgell lvpqgrarvl
       61 tpagedlvgh arrilavhre awlalkgvra dgrvaigttq dfadsglpdl lrafavshpr
      121 vrielrvgrs aelaqalqsg tldlaiamrr apapdevgvl repmmwlcsq kglvsrqdev
      181 plalldphcg freaaitald avgrryriaa gsaslaglrt avnagialtl rtarfahsgi
      241 veaphdlglp pvpiaefair lrqdaeppaq hlaalfssnl alagaps
//
LOCUS       WP_258118222             453 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4910 domain-containing protein [Aeromonas dhakensis].
ACCESSION   WP_258118222
VERSION     WP_258118222.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16254.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..453
                     /product="DUF4910 domain-containing protein"
                     /calculated_mol_wt=51021
     Region          23..445
                     /region_name="COG4310"
                     /note="Uncharacterized conserved protein, cotains an
                     aminopeptidase-like domain [General function prediction
                     only]"
                     /db_xref="CDD:443451"
ORIGIN      
        1 msfspksgyl ptdwddqaqi geqlhrlltl lfplnrsltg dgvrqslalw rehclpelqi
       61 hevasgtecf dwtvpdewnv reayivgpdg rrvvdfqdhn lhlvgysepv rctlslaelq
      121 phlhslpeqp daipyvtsyy krrwgfclph rlrealpege yqvvidatla pgsltygdwv
      181 lpgeseqeil lssytchpsm annelsgpcv gvflmawlas lptrrysyrl mlvpetlgai
      241 vylsrhldql kqrtlagfnl tclgddrsys flpsrqgntl adrigrhvlg hlapgykays
      301 flergsnerq lcapgidlpv tsvmrsrygc yaeyhtsldd lslvtpagla ggfmalrrai
      361 eclelderce vtvlgepqlg krglypdlst rysgwrvrem mnllaysdgk ltlfeiaeti
      421 gapfwrvepl armlldagll rrlspqpdys itr
//
LOCUS       WP_258118223             134 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Aeromonas dhakensis].
ACCESSION   WP_258118223
VERSION     WP_258118223.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 134)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 134)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13669.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..134
                     /product="VOC family protein"
                     /calculated_mol_wt=14652
     Region          4..130
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mqfdhiglvv pdlasgvayc rdvlglnrfs aavedplqrv wvlfvhddhg lcyelvapag
       61 eespvaqvlk trrnvinhla yrvsnlqesa erlrtqrhlp lgpsqpaiaf ggahvqffls
      121 plghivelie aptp
//
LOCUS       WP_258118323             578 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258118323
VERSION     WP_258118323.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 578)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 578)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 578)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 578)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..578
                     /product="ATP-binding protein"
                     /calculated_mol_wt=61689
     Region          <36..178
                     /region_name="COG4233"
                     /note="Thiol-disulfide interchange protein, contains DsbC
                     and DsbD domains [Posttranslational modification, protein
                     turnover, chaperones, Energy production and conversion]"
                     /db_xref="CDD:443377"
     Region          186..>264
                     /region_name="PAS"
                     /note="PAS fold; pfam00989"
                     /db_xref="CDD:395786"
     Region          226..544
                     /region_name="BaeS"
                     /note="Signal transduction histidine kinase [Signal
                     transduction mechanisms]; COG0642"
                     /db_xref="CDD:440407"
ORIGIN      
        1 mvhpsilgqn drrcqrrfig vmlaapffaa gaaitlvtsg mgaavtmaai fatfglcwfa
       61 allvaasgkm afagqvalvm gslalagvia aagglaspva mlvvalpfea wwmgasrraa
      121 lwgaiaafva illqafagsv fpfgpaeita whwllplgwa ltlvprvarl gnpagvqldp
      181 atddrlenii davvlragrh gevldasaka rtilklqpel lfgsglfdri hlsdrvayls
      241 aladmrdgas arrldlrvrl pqngngptad nyrpfslelm raeqedvfal vlrendelag
      301 lreelaaake aaasaevakg rflavvshel rtplnaiigf sdmllhemfg tfkdprqkey
      361 vglvkesgqh llavvtsild vsrieagaya tepepfrfve avemcqsmmr lqaeaknidl
      421 qaqiapdage inadrravqq ilinlvsnai kftpdggdvv vgakrigsrl hfwvrdtgig
      481 iaeedfanlg kpfmqiqndy trrfegtglg lslvkglval hegtmsiesm pgegttvtis
      541 lpvngpkgrs tdkpgvlpmp aakaetkgdr hgslrkta
//
LOCUS       WP_258118407             152 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6314 family protein [Aeromonas dhakensis].
ACCESSION   WP_258118407
VERSION     WP_258118407.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039724.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19834.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..152
                     /product="DUF6314 family protein"
                     /calculated_mol_wt=17112
     Region          30..151
                     /region_name="DUF6314"
                     /note="Family of unknown function (DUF6314); pfam19834"
                     /db_xref="CDD:437666"
ORIGIN      
        1 maekeaviqr lwrqlpqiga fafsasngag satdwsgsge gevvvtdhqg gwlfvetgry
       61 ttphgrvltm hnrfwwqrge qgirlshlry eqpvvlfell pqtdgrwlta ephlcgqdhy
      121 saeltpsegg fllgwqitgp rknerlsyry sv
//
LOCUS       WP_258118430             811 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Aeromonas dhakensis].
ACCESSION   WP_258118430
VERSION     WP_258118430.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 811)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 811)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 811)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 811)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..811
                     /product="ATP-binding protein"
                     /calculated_mol_wt=89857
     Region          13..788
                     /region_name="COG4192"
                     /note="Signal transduction histidine kinase regulating
                     phosphoglycerate transport system [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443346"
     Region          398..>565
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
ORIGIN      
        1 msrlghllam prslgrrlil afvaitaltg amgmaayvmw drlgrqihli veeslpaidn
       61 ayqlerassr lllllaqlrd trdpvqyqrl shsvsttlgd iqrayrlgtp gdqetpsqrq
      121 afgelsalva dhgrylkqqi ehaetlqqlq krsnwlhqdl vddaapllqe vewhltgmva
      181 spddmsefgn vikefsalqd ltfkenelqs lvgeviaqry qqdlesaflf igykideide
      241 ltsrlaeyps tvsyrqilqd iitlvkpdgp lhrllladvq thqqltalrp rlddavsryh
      301 qkvslmvsda nrslsalged ssqqvatgkl vilvvlaltl llsifvlvvl igrrlikrld
      361 llgqeldrva agrldvpvst sgrdeigrlg dslrhfsqql qqmeranaln linntqacli
      421 tchpdgties vnpsaltlfr qtgvepgrpl wqafppaara mladqfgadq plhrlghsec
      481 tlacdqdetp rflhlnlrrf eqgrgyrfii titdvtrqel tarelglrva ertreltenn
      541 rllaeevvqr qqaertllqt qdeliqaakm avvgqamtsl ahelnqplsa mmtylytsra
      601 alaagqlqal dqdlgkldkl grrmsriina lrhfarkspa eevrvrlelg alaeqamlll
      661 etrakrdgct lcnelpeglw letdpvlleq vlvnllvngl davaglarre irlqllerse
      721 arlrlavvds gagfgeailp rlftpfttsk evglglglti crsllarcgg eimlgsaltg
      781 gamvivelaa adpagsnahq neesaiyava r
//
LOCUS       WP_258118473             320 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258118473
VERSION     WP_258118473.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 320)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..320
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=35655
     Region          5..306
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(9,11..12,14,34..36,79..81,120..122,147,151,174..177)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(98,122,147,151)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mtqsilvtgg agnigsaltr alvklpqtqv vvadnlstgs rdkvqidagn ltvvkadand
       61 fddisslfyr fhfthvfhfa avvgvqrtla npllvlrdit gienvlrlck ntgaervyfa
      121 sssevygepf efpqnesttp lnsrlpyavv knlgevylrt fqrefglpft ifrffntygp
      181 rqsedfvlpr fvraaqrgep ltiygdgsqt rtfcyvddtv daciavhrtr ahenevinvg
      241 sdvemsirql aefvievlgs ssklefrppl aegdmtrrcp dtnkmkailn rplvpleegi
      301 rrladhlsrp edrpalrrva
//
LOCUS       WP_258118509             144 aa            linear   BCT 02-MAR-2025
DEFINITION  ricin-type beta-trefoil lectin domain protein [Aeromonas
            dhakensis].
ACCESSION   WP_258118509
VERSION     WP_258118509.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012859.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00652.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..144
                     /product="ricin-type beta-trefoil lectin domain protein"
                     /calculated_mol_wt=15434
     Region          <68..138
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cl49609"
                     /db_xref="CDD:483949"
     Site            order(113..115,126,128,135..136)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467293"
ORIGIN      
        1 maalllggct lkppmdevmn smvsqsqses assllltyng fcvgvagqqa vtqvcgakdt
       61 rpfewalgel kmqetclqar sgnelilapc dghaqwvwre dklfnnkasr cldvagrrht
      121 pntplrlaec ygganqsflv ggie
//
LOCUS       WP_258118526             839 aa            linear   BCT 02-MAR-2025
DEFINITION  caspase family protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258118526
VERSION     WP_258118526.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 839)
  AUTHORS   Wilson,K.P., Black,J.A., Thomson,J.A., Kim,E.E., Griffith,J.P.,
            Navia,M.A., Murcko,M.A., Chambers,S.P., Aldape,R.A., Raybuck,S.A.
            et al.
  TITLE     Structure and mechanism of interleukin-1 beta converting enzyme
  JOURNAL   Nature 370 (6487), 270-275 (1994)
   PUBMED   8035875
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012862.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00656.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..839
                     /product="caspase family protein"
                     /GO_function="GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=90039
     Region          10..242
                     /region_name="COG4249"
                     /note="Uncharacterized conserved protein, contains caspase
                     domain [General function prediction only]"
                     /db_xref="CDD:443391"
     Region          513..737
                     /region_name="TPR"
                     /note="TPR repeat [General function prediction only];
                     COG0790"
                     /db_xref="CDD:440553"
     Region          529..557
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          581..610
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          617..646
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          654..683
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          726..755
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
ORIGIN      
        1 mlasvtafda saverrvafv ignsdyreis alknpakdvv dvsntfraag fdvfvasnlt
       61 klqfedqfrn ylaavdgadv avvyysghgf qiggenflip vdaslkdaad vevqaiklnd
      121 vlqqmrsksk iqviildacr nnpfprkdyw lrdqlltasg tglaqvrssl ntliafatep
      181 gavaydgagd lspfslafsr ralapnqeir tvmsavrrdv veatkglqvp wensslidev
      241 vlmrrssrps lppvlervvl sgvgpvdlnl pepvevdggs itvsierppa lgrlmlngkv
      301 veageliqgk dlphlqmdvp kgvgepeemd mlayaardnw ggeakgmlvf rvksgegtqg
      361 eqvmasleae qkqqvlqrgi hvtgaaeaie nreidvpvgi gavalnldlp tddsavslkv
      421 anypatgtls lpdraltpes sltvgevevl ryepqigtsa pvevtfeira dsgvskpakm
      481 klspsvdpcd laagepldlq gvvpgllpne igadavklce tavkaypdva rfryelgral
      541 laagkvdqar kaiqqaadrg hvravfelgy lyatgtglav drkqantfya aaadkgdpyg
      601 mtswgralfh gygverdtgk gldlllkaaa mghtyamndl aaiftegrng vpadqarava
      661 fleagvqrqd mysmnllgrn ylsgrgvekd pkaalalfqk aidlgqpyap gslarmyrdg
      721 vgveqnldea qrlfelatsr gdqsgaydra alemqkgdka dqavavrfla ftvaldlrne
      781 lpdaratlak fgakakaaal kqlrgelksk iplsgsvdkq lvkvaravwe qanprrdlf
//
LOCUS       WP_258118546             249 aa            linear   BCT 02-MAR-2025
DEFINITION  D-glutamate cyclase family protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258118546
VERSION     WP_258118546.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 249)
  AUTHORS   Ariyoshi,M., Katane,M., Hamase,K., Miyoshi,Y., Nakane,M.,
            Hoshino,A., Okawa,Y., Mita,Y., Kaimoto,S., Uchihashi,M., Fukai,K.,
            Ono,K., Tateishi,S., Hato,D., Yamanaka,R., Honda,S., Fushimura,Y.,
            Iwai-Kanai,E., Ishihara,N., Mita,M., Homma,H. and Matoba,S.
  TITLE     D-Glutamate is metabolized in the heart mitochondria
  JOURNAL   Sci Rep 7, 43911 (2017)
   PUBMED   28266638
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018937.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07286.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..249
                     /product="D-glutamate cyclase family protein"
                     /calculated_mol_wt=26732
     Region          2..237
                     /region_name="D-Glu_cyclase"
                     /note="D-glutamate cyclase; cl01790"
                     /db_xref="CDD:470346"
ORIGIN      
        1 mgayeghtgg lahgklqanv vivprsfagd fhqfcirnpk scplvgvnra gsplipalgd
       61 idirtdapqy niyhfgeltr qrtdiidlwr ddfaafalgs sltveaalae kgvklrrigc
      121 gkasakfrtr iktcrvgpfg gemvvsmrpi rrcdvdrvra ltarfphahg spihvgdptv
      181 igiadlmapd wgdavkimdg evpvfwassi taqdalarae latsitvspg hmlitdvdar
      241 adagvfkvy
//
LOCUS       WP_258118598             416 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Mesorhizobium onobrychidis].
ACCESSION   WP_258118598
VERSION     WP_258118598.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025072.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13692.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..416
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=44754
     Region          17..340
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mkvqdaegki dvgrrlriah vitrlingga dentvhscnw aaqgghdval lhgetvlpei
       61 iakvdprvel igvpgltrsi spvsdmrall altrrfraln adivhthtsk agilgrlaaw
      121 aagvpaivhg vhivpfvnvg vaerftylal eklaapvtsa fisvsegird lclsagvghp
      181 dkhyvvhsgf dldrfrnagp pdgwrdllrl tpdaprpsvl lmiaafeprk rhtefldafn
      241 kvavrlpdav lvlagdgplr stvesrakql glerqvvftg yrddperlia ladlcllcsm
      301 reglprvvmq ylaggkpcva cdlpglrevl rpgingvitp addlaamada iaalledrgr
      361 laclaqgaaa atdlsnwdvk lmgkrtdaiy realdqhras tgvsttppvr kwalpr
//
LOCUS       WP_258118581             716 aa            linear   BCT 02-MAR-2025
DEFINITION  GDSL-type esterase/lipase family protein [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258118581
VERSION     WP_258118581.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 716)
  AUTHORS   Molgaard,A., Kauppinen,S. and Larsen,S.
  TITLE     Rhamnogalacturonan acetylesterase elucidates the structure and
            function of a new family of hydrolases
  JOURNAL   Structure 8 (4), 373-383 (2000)
   PUBMED   10801485
REFERENCE   2  (residues 1 to 716)
  AUTHORS   Upton,C. and Buckley,J.T.
  TITLE     A new family of lipolytic enzymes?
  JOURNAL   Trends Biochem Sci 20 (5), 178-179 (1995)
   PUBMED   7610479
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024863.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13472.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..716
                     /product="GDSL-type esterase/lipase family protein"
                     /calculated_mol_wt=73747
     Region          44..248
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Site            order(52,107,136,228,231)
                     /site_type="active"
                     /db_xref="CDD:238871"
     Site            order(52,228,231)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238871"
     Site            order(52,107,136)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238871"
     Region          257..>431
                     /region_name="COG2931"
                     /note="Ca2+-binding protein, RTX toxin-related [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:442175"
     Region          <269..>324
                     /region_name="Peptidase_M10_C"
                     /note="Peptidase M10 serralysin C terminal; cl23859"
                     /db_xref="CDD:451582"
     Region          502..>654
                     /region_name="COG2931"
                     /note="Ca2+-binding protein, RTX toxin-related [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:442175"
     Region          <594..>677
                     /region_name="Peptidase_M10_C"
                     /note="Peptidase M10 serralysin C terminal; cl23859"
                     /db_xref="CDD:451582"
ORIGIN      
        1 mtvfydssrp dafaggagsd avtygassrg viadlasgha ykllsilplg dsitygvias
       61 ssdtesggyr kfmleqlgal nvkidfvgss sngpasmgdr dheghrnwtl nqlngidndv
      121 vaatkpdavl liagtndsst dsvptmlqdl rtlllsltss dpaltvfvgs lppvrvgqqs
      181 qaradrvday ndampglise laaqghkvif vdmrdltpdd itappldsgl hptadgyaki
      241 aahwidalee hfrldgtgig rdrdtftsie nltgssfadq lggneganvl dglagddvle
      301 grggsdqlig gvgadtlvgg agndvyyvdn agdktieatn ggidethayl nwtladnven
      361 lflrsaanla akgnglantm vgngaantle glggadrldg rggsdrlvgg lgtdiltggt
      421 gndsfvfatg hghdtvtdfd lsgddlleis gyqsyselrq vgsdtlvvfs dsdtvllkdv
      481 tsaslsssdf vwidppnepp pgsivgddgn ntltggsgad viygmdgsdi lngkagadth
      541 vggagddvyy vdnagdktie etnggfdeth aylnwtladn venlflrsaa nlagkgngla
      601 ntmvgngaan tleglggadr ldgrggsdrl vgglgtdilt ggtgndsfvf aaghghdtit
      661 dfdlsgddll eisgyqnyse lrqvgsdtlv vfsdsdmlsl ngvlvasisn sdflfv
//
LOCUS       WP_258118664             795 aa            linear   BCT 02-MAR-2025
DEFINITION  replication endonuclease [Aeromonas dhakensis].
ACCESSION   WP_258118664
VERSION     WP_258118664.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 795)
  AUTHORS   Esposito,D. and Scocca,J.J.
  TITLE     Identification of an HP1 phage protein required for site-specific
            excision
  JOURNAL   Mol Microbiol 13 (4), 685-695 (1994)
   PUBMED   7997180
REFERENCE   2  (residues 1 to 795)
  AUTHORS   Liu,Y., Saha,S. and Haggard-Ljungquist,E.
  TITLE     Studies of bacteriophage P2 DNA replication. The DNA sequence of
            the cis-acting gene A and ori region and construction of a P2
            mini-chromosome
  JOURNAL   J Mol Biol 231 (2), 361-374 (1993)
   PUBMED   8510152
REFERENCE   3  (residues 1 to 795)
  AUTHORS   Hsu,M.Y., Inouye,M. and Inouye,S.
  TITLE     Retron for the 67-base multicopy single-stranded DNA from
            Escherichia coli: a potential transposable element encoding both
            reverse transcriptase and Dam methylase functions
  JOURNAL   Proc Natl Acad Sci U S A 87 (23), 9454-9458 (1990)
   PUBMED   1701261
REFERENCE   4  (residues 1 to 795)
  AUTHORS   van Mansfeld,A.D., van Teeffelen,H.A., Baas,P.D. and Jansz,H.S.
  TITLE     Two juxtaposed tyrosyl-OH groups participate in phi X174 gene A
            protein catalysed cleavage and ligation of DNA
  JOURNAL   Nucleic Acids Res 14 (10), 4229-4238 (1986)
   PUBMED   2940511
REFERENCE   5  (residues 1 to 795)
  AUTHORS   Ikeda,J.E., Yudelevich,A., Shimamoto,N. and Hurwitz,J.
  TITLE     Role of polymeric forms of the bacteriophage phi X174 coded gene A
            protein in phi XRFI DNA cleavage
  JOURNAL   J Biol Chem 254 (19), 9416-9428 (1979)
   PUBMED   158588
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017640.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05840.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..795
                     /product="replication endonuclease"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /calculated_mol_wt=88436
     Region          89..457
                     /region_name="Phage_GPA"
                     /note="Bacteriophage replication gene A protein (GPA);
                     pfam05840"
                     /db_xref="CDD:336220"
     Region          <716..>787
                     /region_name="SPX"
                     /note="Domain found in Syg1, Pho81, XPR1, and related
                     proteins; cl21499"
                     /db_xref="CDD:354841"
ORIGIN      
        1 midaitnlhg iqlpqrylvg vhavnmagaa eqlariewhv akplakhylh rypanhktan
       61 iwlrrmvdac aaaqsrfpvp vidlrndvrr elvaaewarr cqqllaragn ectaaellad
      121 igaqakawhf cptlpihprt kverllgrpl sqeerdkltd evdkfegaaa sllvrlldes
      181 wwlrkinraw aiyceliail tgqvrkgvsp yasahavref tqrkaaqqaw magmsavnee
      241 lgqeidlada imasvanpei rrhelmvrmr gfedmaqeqg klglfltlta psshhawrqg
      301 skdksktyqn dkfngacpte tnrllckqwa rfraalareg imafgfrvve phhdgtphwh
      361 cllfinpehq rdfltllayh ftaaeraelk mpngaqldal aelpirnkfp rikwllnved
      421 ptvvkainpr vnwkvidptk gsatgyiaky iaknidghkv gmdyeaeapv dhttiavaaw
      481 ascwrirqfq qiggpavsvw relrrlgdev iewdcileaa rtaadnnrwg dfidamggid
      541 lprkehlirl skrldeaank ygedvlklmg vitdigmtta vtrtegwqiv rkgvtgsglg
      601 eqrepavger selqsgggsr pprssvnnct kgsksgvkgs alakelsrmg ldvsnedlll
      661 qgciinadgq yvrlvgdrli vtrtwpgagd avadqltaev eaeqaskraa ssdqlkqqar
      721 elvhsgdsvt ewlaalplak aeeaiaiftr llddeedras yqpteqeqar vasmqadndr
      781 hqaeiakara rlgve
//
LOCUS       WP_258118685             358 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase [Aeromonas dhakensis].
ACCESSION   WP_258118685
VERSION     WP_258118685.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 358)
  AUTHORS   Keller,N.P., Dischinger,H.C. Jr., Bhatnagar,D., Cleveland,T.E. and
            Ullah,A.H.
  TITLE     Purification of a 40-kilodalton methyltransferase active in the
            aflatoxin biosynthetic pathway
  JOURNAL   Appl Environ Microbiol 59 (2), 479-484 (1993)
   PUBMED   8434913
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013087.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00891.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..358
                     /product="methyltransferase"
                     /GO_function="GO:0008171 - O-methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=40361
     Region          <181..>286
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(186..192,210..211,236..238,254)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
ORIGIN      
        1 mnhyqtdpyn aleaiseaqk iafgpmlfqa swclretgvl ayletrgqrg apladiaqac
       61 elseygagvl ldmglggglc ylaeehyvlg rvgkyllndt msrvnldftq hvcyqplahl
      121 ldairngtpa glqefgpwqt lyphlselpe parrswfafd hfysdwafqq aqdkvfgyep
      181 rhlydlggnt gkwaiacakr dpalrvtild lpeqlalarr nieeaglter vqghpvdllq
      241 pgtlpgeadi wwmsqfldcf sheqivailn rirlamkpda rvcilelfwd rqsfeaasfs
      301 lnatslyftc langnsrfyh skqlyqclre ahfhveaehe ipgpghtllv arplhtrp
//
LOCUS       WP_258118837             140 aa            linear   BCT 02-MAR-2025
DEFINITION  MauE/DoxX family redox-associated membrane protein [Aeromonas
            dhakensis].
ACCESSION   WP_258118837
VERSION     WP_258118837.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 140)
  AUTHORS   van der Palen,C.J., Reijnders,W.N., de Vries,S., Duine,J.A. and van
            Spanning,R.J.
  TITLE     MauE and MauD proteins are essential in methylamine metabolism of
            Paracoccus denitrificans
  JOURNAL   Antonie Van Leeuwenhoek 72 (3), 219-228 (1997)
   PUBMED   9403107
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018942.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07291.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..140
                     /product="MauE/DoxX family redox-associated membrane
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0030416 - methylamine metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=14786
ORIGIN      
        1 mavylrvltr falggffvvs agfklaapdl ftaqigafgl lwspfiplav wgliglelca
       61 gvavianrrw glwlviglla lfipvlgygi aigldiscgc lgradlgslp eallrdllll
      121 tlagallrhs rpvftvpkeq
//
LOCUS       WP_258118853             132 aa            linear   BCT 02-MAR-2025
DEFINITION  SMR family transporter [Aeromonas dhakensis].
ACCESSION   WP_258118853
VERSION     WP_258118853.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 132)
  AUTHORS   Yerushalmi,H., Lebendiker,M. and Schuldiner,S.
  TITLE     EmrE, an Escherichia coli 12-kDa multidrug transporter, exchanges
            toxic cations and H+ and is soluble in organic solvents
  JOURNAL   J Biol Chem 270 (12), 6856-6863 (1995)
   PUBMED   7896833
REFERENCE   2  (residues 1 to 132)
  AUTHORS   Parent,R. and Roy,P.H.
  TITLE     The chloramphenicol acetyltransferase gene of Tn2424: a new breed
            of cat
  JOURNAL   J Bacteriol 174 (9), 2891-2897 (1992)
   PUBMED   1314803
REFERENCE   3  (residues 1 to 132)
  AUTHORS   Sasatsu,M., Shima,K., Shibata,Y. and Kono,M.
  TITLE     Nucleotide sequence of a gene that encodes resistance to ethidium
            bromide from a transferable plasmid in Staphylococcus aureus
  JOURNAL   Nucleic Acids Res 17 (23), 10103 (1989)
   PUBMED   2602117
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013089.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00893.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..132
                     /product="SMR family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /calculated_mol_wt=14280
     Region          11..113
                     /region_name="EamA"
                     /note="EamA-like transporter family; cl23754"
                     /db_xref="CDD:474045"
ORIGIN      
        1 mlfnrmllar ifltgailte vagtssmami peneagwlny lpmwllisfs ylllskaakt
       61 isigiafalw eglgialitv vsvlfldyql naqeliglal aivgivlvtm gerhdepaar
      121 tpraneeavc tr
//
LOCUS       WP_258118950             614 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase family 2 protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258118950
VERSION     WP_258118950.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 614)
  AUTHORS   Zhang,Y.L., Arakawa,E. and Leung,K.Y.
  TITLE     Novel Aeromonas hydrophila PPD134/91 genes involved in O-antigen
            and capsule biosynthesis
  JOURNAL   Infect Immun 70 (5), 2326-2335 (2002)
   PUBMED   11953367
  REMARK    Erratum:[Infect Immun 2002 Jun;70(6):3308]
REFERENCE   2  (residues 1 to 614)
  AUTHORS   Swartley,J.S., Liu,L.J., Miller,Y.K., Martin,L.E., Edupuganti,S.
            and Stephens,D.S.
  TITLE     Characterization of the gene cassette required for biosynthesis of
            the (alpha1-->6)-linked N-acetyl-D-mannosamine-1-phosphate capsule
            of serogroup A Neisseria meningitidis
  JOURNAL   J Bacteriol 180 (6), 1533-1539 (1998)
   PUBMED   9515923
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025017.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13632.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..614
                     /product="glycosyltransferase family 2 protein"
                     /calculated_mol_wt=69727
     Region          97..335
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
     Site            order(104,106,132,195,197)
                     /site_type="active"
                     /db_xref="CDD:133043"
     Region          <263..563
                     /region_name="PLN02189"
                     /note="cellulose synthase"
                     /db_xref="CDD:215121"
ORIGIN      
        1 mrtprialsv dreeplmvpv ftgrkrveyi mgavlwamav affwqwwvfg athtnmvgsi
       61 lvtallawit llpvyfitif fnarrphgrl risagsrvam vvtkapsepf evvaetlram
      121 laqnvphdtw ladedpspat lawcrehgvf vstrksrady hrqswprrtr ckegnlaffy
      181 dhygydqydf vsqldadhvp epdylynmlr pfadptigyv sapsicdrna heswsargrl
      241 yieasmhgsl qagynngfap vcigshyavr taalkeiggl gpelaedhst tlfmnaygwr
      301 gahaldaiah gdgprtfadl vtqefqwsrs lvtillqysp klighlplrl kvqflfsqfw
      361 yplyafflal tfllpvivli qgdnfinvty pefllhfmpq slmilllafw wrssrtfrpi
      421 dgkifsweam lfllarwpwv lagsfaafrd wmtgsfvdfr vtpkgtsevd plpfrvlapy
      481 afvvlisilp vvfvqdayqt rgffvfaiin acfylllifm illqhgrend vrmksrayrp
      541 alassfmall mvtsfatver grdgiealaw gtksfslfdd sfsiagagvg gravhktifn
      601 prwrtnapsn snqr
//
LOCUS       WP_258118992             893 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA domain-containing protein [Escherichia coli].
ACCESSION   WP_258118992
VERSION     WP_258118992.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024486.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13086.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..893
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..893
                     /product="AAA domain-containing protein"
                     /GO_function="GO:0004386 - helicase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=101760
     Region          119..>219
                     /region_name="recD"
                     /note="exodeoxyribonuclease V subunit alpha; PRK10875"
                     /db_xref="CDD:236783"
     Region          179..>237
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            201..207
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          <281..729
                     /region_name="DNA2"
                     /note="Superfamily I DNA and/or RNA helicase [Replication,
                     recombination and repair]; COG1112"
                     /db_xref="CDD:440729"
     Region          <813..879
                     /region_name="PDDEXK_nuclease-like"
                     /note="PDDEXK family nucleases; cl40440"
                     /db_xref="CDD:477358"
ORIGIN      
        1 mvticvdgen kthkitdwtl wagnddgevm ltchfrsgkk ytrplsvcqi tptvnlrnvf
       61 lerkgdavts raerviiygd kyaavyyheg erpyimkttg ldfqqcsaft eravfnylcr
      121 vanerifyar gnnrnideni lrqikkivph pdtalhaycs gqskkrdlpw glifpfglne
      181 sqllaveraf ssqisviegp pgtgktqtil nivaniliqn ktvailsnnn savsnvyekm
      241 dkqqlgyvva rlgstenrqq ffstsisrse evlpdspsan aiddvlqqve khlnainqva
      301 slkaeineln ieykylqqwq sqnlrpeelf shkyrfssqk ttdlmayihy lsdrrigfrn
      361 ridlllnfri lkvkplmipe rrlalftslq lsyyekaire kqislneyeg vlkksdfkil
      421 lgrltswsml ylkqhlrrnv strssfsaet yrdefdhfik rfpvigssth siinsigkga
      481 lldyviidea sqqdivpgil glgcarnviv vgdrkqlphv pvllpssppp paeyynceky
      541 slldsvcmlf rnmvpvtllk ehyrchpkii qfcnkqfydn alipltvdsg easlslvita
      601 kgnhtrnfsn lreleslegh ywdeessrgy iapynaqvnl aekvlpadfv kstvhkfqgr
      661 ecdeivfstv ldkkrssqhs rniafvdnpe lvnvavsrar nkftlvtgnd vferhaghia
      721 aliryikyya ddgeifespv isafdllyse ydkslerlns rlnsndshfk seqivacllr
      781 dilsqdsyrs mmfhsqialn qlvllergdf threqlfmrn rascdfvvyy kvgktplgvi
      841 evdggyhlts vqaerdelkn silkkcglpl lrlrtidsdi egklgaflsg ltg
//
LOCUS       WP_258119045             407 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Mesorhizobium onobrychidis].
ACCESSION   WP_258119045
VERSION     WP_258119045.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..407
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=42153
     Region          17..383
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(24..25,28..29,32,64,118..119,121..123,126,146,
                     149..150,153,221,224..225,228..230,233,255,259,312..313,
                     317,321,337,340..341,344..345,348)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340863"
ORIGIN      
        1 mpnpyreifk argakgfaaa gfvarmpmam apigivamls qthgeywlag avsatyalan
       61 afvapqisrl vdrlgqariv mpttvisala fvvliaaanq dwpiwtlfvs allaaampsi
      121 pamvrarwte lfrdrpemnt afafesaade lvyiagasls vglsvalfpe agmlastlfl
      181 afgstafilq rsteprvrpv eigsrssair lrpvqiitla lifigatfat tevstvaitk
      241 elgqpgaasl vigvyalgsf vvgiiigaln lktplqiqla iaiaiialtt lpllvadtvp
      301 llalavfvsg vaisptfita fglierrvpe amltegvtwv mtgigigmal gsfaagwvvd
      361 afgaqsgflv svaagaialv ivlagqrsla tadcdtsacd aaavpae
//
LOCUS       WP_258119046             475 aa            linear   BCT 02-MAR-2025
DEFINITION  GA-like domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_258119046
VERSION     WP_258119046.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 475)
  AUTHORS   Whelan,F., Lafita,A., Gilburt,J., Degut,C., Griffiths,S.C.,
            Jenkins,H.T., St John,A.N., Paci,E., Moir,J.W.B., Plevin,M.J.,
            Baumann,C.G., Bateman,A. and Potts,J.R.
  TITLE     Periscope Proteins are variable-length regulators of bacterial cell
            surface interactions
  JOURNAL   Proc Natl Acad Sci U S A 118 (23) (2021)
   PUBMED   34074781
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047257.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22775.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..475
                     /product="GA-like domain-containing protein"
ORIGIN      
        1 gdlqdrvdal dgiqvpevnd qdgngraddl dvaaataave aaeaadqaak dklaelnadn
       61 litpeekaql eaakqnadtl keeansavqa lpdtvaekgd lqdrvdaldg iqvpevndqd
      121 gngipdfids qlaffnkass pnvsgdlypn aprfswstes nkistvnknw egilnanpga
      181 yvtrevistn veqynyngin gsdiisikns lfgldrvqvd rqpvglftge gndiivtgqd
      241 ygrntslgyt dhanitnmgg gddtlvvgag nnnvtlyvnd dgqlrattdg ydglysinyn
      301 qinpgvtggt isgtdismge gndtilalgt egntadaiin tnidlgqgnd fiyingnvss
      361 awntsvnirg negvdtlfid ngnisslqfs gfeviklgrn ggvnirevdl lksgadaieg
      421 gdlkiireas srvklegdfi qkgietvegv nylvysndnt pgirilvdtd iplim
//
LOCUS       WP_258119057              86 aa            linear   BCT 02-MAR-2025
DEFINITION  aldo/keto reductase [Mesorhizobium onobrychidis].
ACCESSION   WP_258119057
VERSION     WP_258119057.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 86)
  AUTHORS   Gulbis,J.M., Zhou,M., Mann,S. and MacKinnon,R.
  TITLE     Structure of the cytoplasmic beta subunit-T1 assembly of
            voltage-dependent K+ channels
  JOURNAL   Science 289 (5476), 123-127 (2000)
   PUBMED   10884227
REFERENCE   2  (residues 1 to 86)
  AUTHORS   Wilson,D.K., Tarle,I., Petrash,J.M. and Quiocho,F.A.
  TITLE     Refined 1.8 A structure of human aldose reductase complexed with
            the potent inhibitor zopolrestat
  JOURNAL   Proc Natl Acad Sci U S A 90 (21), 9847-9851 (1993)
   PUBMED   8234324
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012472.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00248.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..86
                     /product="aldo/keto reductase"
                     /calculated_mol_wt=9662
     Region          <2..>78
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
ORIGIN      
        1 mtgilvrela srdeivlana iliainnllr rlstdhvdly qihrwdrirp srwrpyaaka
       61 gdarylgass msawhfaksa ekalfg
//
LOCUS       WP_258119146             240 aa            linear   BCT 02-MAR-2025
DEFINITION  response regulator [Aeromonas dhakensis].
ACCESSION   WP_258119146
VERSION     WP_258119146.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 240)
  AUTHORS   Pao,G.M. and Saier,M.H. Jr.
  TITLE     Response regulators of bacterial signal transduction systems:
            selective domain shuffling during evolution
  JOURNAL   J Mol Evol 40 (2), 136-154 (1995)
   PUBMED   7699720
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012301.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00072.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..240
                     /product="response regulator"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=27501
     Region          1..236
                     /region_name="ompR"
                     /note="osmolarity response regulator; Provisional;
                     PRK09468"
                     /db_xref="CDD:181883"
ORIGIN      
        1 mnqnsthilv vddhseirdl lkrfleqhgl rvscardgke mkrllevref dllvldlmmp
       61 gedgltlcre lraksslpii mltamgeetd riiglemgad dylakpfnpr ellarikavm
      121 rrtqvepqpv aealtrdlrf drwlldinrr elvdeegvgl slstaefdll rvflerpqrv
      181 lsrdqlldla rgreavafdr aidtlvsrlr rklerdpknp eliktiwggg ylfaadvtqv
//
LOCUS       WP_258119189             161 aa            linear   BCT 02-MAR-2025
DEFINITION  GNAT family N-acetyltransferase [Aeromonas dhakensis].
ACCESSION   WP_258119189
VERSION     WP_258119189.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 161)
  AUTHORS   Chinenov,Y.
  TITLE     A second catalytic domain in the Elp3 histone acetyltransferases: a
            candidate for histone demethylase activity?
  JOURNAL   Trends Biochem Sci 27 (3), 115-117 (2002)
   PUBMED   11893502
REFERENCE   2  (residues 1 to 161)
  AUTHORS   Neuwald,A.F. and Landsman,D.
  TITLE     GCN5-related histone N-acetyltransferases belong to a diverse
            superfamily that includes the yeast SPT10 protein
  JOURNAL   Trends Biochem Sci 22 (5), 154-155 (1997)
   PUBMED   9175471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012792.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00583.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..161
                     /product="GNAT family N-acetyltransferase"
                     /EC_number="2.3.1.-"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /calculated_mol_wt=17512
     Region          2..160
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
ORIGIN      
        1 mqitirhaep adapalrdly ampnaqagtl hlptpplsqw qkrlessdmv alvaeadggl
       61 vgqitlhvep nprrkhvagi gmgvrddwag kgvgsalmaa aldladnwln lhrieltvfv
      121 dneaalalyr kfgfieegla rgfafrqgey vdalymarir p
//
LOCUS       WP_258119198             459 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphatase PAP2 family protein [Aeromonas dhakensis].
ACCESSION   WP_258119198
VERSION     WP_258119198.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 459)
  AUTHORS   Neuwald,A.F.
  TITLE     An unexpected structural relationship between integral membrane
            phosphatases and soluble haloperoxidases
  JOURNAL   Protein Sci 6 (8), 1764-1767 (1997)
   PUBMED   9260289
REFERENCE   2  (residues 1 to 459)
  AUTHORS   Stukey,J. and Carman,G.M.
  TITLE     Identification of a novel phosphatase sequence motif
  JOURNAL   Protein Sci 6 (2), 469-472 (1997)
   PUBMED   9041652
REFERENCE   3  (residues 1 to 459)
  AUTHORS   Messerschmidt,A. and Wever,R.
  TITLE     X-ray structure of a vanadium-containing enzyme: chloroperoxidase
            from the fungus Curvularia inaequalis
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 392-396 (1996)
   PUBMED   8552646
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013718.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01569.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..459
                     /product="phosphatase PAP2 family protein"
                     /calculated_mol_wt=49507
     Region          22..102
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cd02883"
                     /db_xref="CDD:467528"
     Region          148..315
                     /region_name="PgpB"
                     /note="Membrane-associated phospholipid phosphatase [Lipid
                     transport and metabolism]; COG0671"
                     /db_xref="CDD:440435"
     Region          233..315
                     /region_name="PAP2_like"
                     /note="PAP2_like proteins, a super-family of histidine
                     phosphatases and vanadium haloperoxidases, includes type 2
                     phosphatidic acid phosphatase or lipid phosphate
                     phosphatase (LPP), Glucose-6-phosphatase,
                     Phosphatidylglycerophosphatase B and bacterial acid...;
                     cd01610"
                     /db_xref="CDD:238813"
     Site            order(237,244,264..266,304,310,314)
                     /site_type="active"
                     /db_xref="CDD:238813"
     Region          <251..>443
                     /region_name="COG4233"
                     /note="Thiol-disulfide interchange protein, contains DsbC
                     and DsbD domains [Posttranslational modification, protein
                     turnover, chaperones, Energy production and conversion]"
                     /db_xref="CDD:443377"
ORIGIN      
        1 mlrhcflllc lllsspplla aptaavcvvk hqqqlllvqd rvssrysltg gyidagetpq
       61 qaalrelyee tglrgrivae lgpwqrallf acqtlepira qtgsgfvsll qapnlggeil
      121 narliaparl sddqrrfpaq ldwlapqlaa mpdspvlwlp dfrgegnalh qmevplihql
      181 qtwlgsqarw levsnlfgsa afqlallpll lpwlgwprvr qlllamltlt llvqvakegi
      241 gwprpfhldp alaqgsaqgf gmpsghtasa llfwgvllra cwpaslwrst vlalllaalt
      301 glarvwlgvh flsdvaagll lgalllalyp rlaglaasrw gwagltlaca laagwsqssa
      361 laglatfslg ltlgmmlplp rtapagwrlp llallgglpl gaawwalplw ltsswlillg
      421 qwllycclgl wlsaglwwil slvnndplpk gpgpdkgll
//
LOCUS       WP_258119239             355 aa            linear   BCT 02-MAR-2025
DEFINITION  cation:dicarboxylate symporter family transporter [Aeromonas
            dhakensis].
ACCESSION   WP_258119239
VERSION     WP_258119239.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012593.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00375.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..355
                     /product="cation:dicarboxylate symporter family
                     transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /calculated_mol_wt=37665
     Region          1..351
                     /region_name="SDF"
                     /note="Sodium:dicarboxylate symporter family; cl00573"
                     /db_xref="CDD:444986"
ORIGIN      
        1 mqkkivssly fqvllaitlg vilghiypdl gadmkplgdg fvklikmiia pvifctvvtg
       61 iagmesmkav gktgaially fevvstiali iglcvvnllq pgagmnvdpa tldasaisay
      121 aeqakaqgii pflldvipgs vigafasgni lqvllfavlf gfslhhigek gkvifnvids
      181 fsqvifgiin mimrlapvga fgamaftigk ygigslvqlg qliacfymtc llfiflvlgs
      241 iarangfsil rfisyireel livlgtssse svlprmlvkm ealgckksvv ghlplaglal
      301 ilgidrfmse araltnlign gvatlvvary cdqldeqqmh ealsnptqav kvdqh
//
LOCUS       WP_258119337              97 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6958 family protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258119337
VERSION     WP_258119337.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046224.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22278.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..97
                     /product="DUF6958 family protein"
                     /calculated_mol_wt=10428
ORIGIN      
        1 maekievenv aspgrvvrvd kakyeamkga llavlppaap gltvaeakqk llpllpqdlf
       61 pggakagwwl kaaqldleak griereatkp lrlhrkq
//
LOCUS       WP_258119312             264 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258119312
VERSION     WP_258119312.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 264)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 264)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 264)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 264)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..264
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=28723
     Region          2..>254
                     /region_name="MglA"
                     /note="ABC-type sugar transport system, ATPase component
                     [Carbohydrate transport and metabolism]; COG1129"
                     /db_xref="CDD:440745"
ORIGIN      
        1 maeplvrmen irksygrvqa lvdanfhvne reivgllgdn gagkstlikv lsgavpltsg
       61 difirgkkvd frstsdaiah gietiyqdsa lvtqlsiarn lflgrepikp prflnrmdqe
      121 amnvvardll kqvgisknip pttpigslsg gerqavaiar amhfdsdlii ldeptnnlgv
      181 aetqgvlsfv rsardsghsc ifiahnihhv fqvvdrivvm rrgkvvaddi dpkntnvaev
      241 eriitgmsde eirdaivqgk qsqg
//
LOCUS       WP_258119422             294 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258119422
VERSION     WP_258119422.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..294
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=33000
     Region          <178..287
                     /region_name="GlxA"
                     /note="Transcriptional regulator GlxA, contains an amidase
                     domain and an AraC-type DNA-binding HTH domain
                     [Transcription]; COG4977"
                     /db_xref="CDD:444002"
ORIGIN      
        1 msfrpllgdg rvrsqeekse tlqtaswgss sivfdnrrwa creaelrwta phhlivltee
       61 ggtshtsirh earslydgmd rpgaltfvpa gaerqgcyrd vnlsysalwi dpdirlpgce
      121 rlrdlpilvn rkdvviatll sslrdemalg dkpdtayveh lvalvslrva nlnreqqppv
      181 rhgclsrral grvrdyidah mnsdvslsel aavvdmavds farrfkattg lapyayliee
      241 rvrraetllr etdlsiasia frlgfssqsh ftttfrrlrg mtprayrvns spes
//
LOCUS       WP_258119451             533 aa            linear   BCT 02-MAR-2025
DEFINITION  carboxyl transferase domain-containing protein [Aeromonas
            dhakensis].
ACCESSION   WP_258119451
VERSION     WP_258119451.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 533)
  AUTHORS   Zhang,H., Yang,Z., Shen,Y. and Tong,L.
  TITLE     Crystal structure of the carboxyltransferase domain of
            acetyl-coenzyme A carboxylase
  JOURNAL   Science 299 (5615), 2064-2067 (2003)
   PUBMED   12663926
REFERENCE   2  (residues 1 to 533)
  AUTHORS   Thornton,C.G., Kumar,G.K., Haase,F.C., Phillips,N.F., Woo,S.B.,
            Park,V.M., Magner,W.J., Shenoy,B.C., Wood,H.G. and Samols,D.
  TITLE     Primary structure of the monomer of the 12S subunit of
            transcarboxylase as deduced from DNA and characterization of the
            product expressed in Escherichia coli
  JOURNAL   J Bacteriol 175 (17), 5301-5308 (1993)
   PUBMED   8366018
REFERENCE   3  (residues 1 to 533)
  AUTHORS   Toh,H., Kondo,H. and Tanabe,T.
  TITLE     Molecular evolution of biotin-dependent carboxylases
  JOURNAL   Eur J Biochem 215 (3), 687-696 (1993)
   PUBMED   8102604
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013225.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01039.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..533
                     /product="carboxyl transferase domain-containing protein"
                     /calculated_mol_wt=56978
     Region          8..533
                     /region_name="Carboxyl_trans"
                     /note="Carboxyl transferase domain; cl47203"
                     /db_xref="CDD:481543"
ORIGIN      
        1 msrlhsrldt aspdyeanqa amqalvddln arleeialgg gaannarhqa rgkllpreri
       61 nqlldpgspf lelsalagwq vydepvpaag iltgigrvsg rlcmlvvnda tvkggtyypl
      121 tvkkhlraqa iaerlrlpcl ylvdsggafl pmqdevfpdr ehfgrifynq armsaqnipq
      181 lavvmglcta ggayvpamad esimvkeqat iflagpplvk aatgeeisae alggaevhca
      241 hsgvadhmar ddahalaiar tlvthlgnep vetnpgyepp cypiedlygl vgtslkrpyd
      301 areliarlvd gsdfdefkal fgttlvtgfa ricgmpvgil anngvlhsds aqkgahfiql
      361 cnrraipllf lqnitgfmvg ssaeregiak hgaklvtava csrvpkitlv vggsfgagny
      421 gmcgraydpd flfswpnsri svmggeqaag vlvqvrrdkl aaegkplseq eaaairapvi
      481 eqyerqghpy yasarlwddg vidpaqsrtv lalalaacqg aetgpeqygi frm
//
LOCUS       WP_258119469             752 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5682 family protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258119469
VERSION     WP_258119469.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040143.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18934.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..752
                     /product="DUF5682 family protein"
                     /calculated_mol_wt=80905
     Region          22..731
                     /region_name="DUF5682"
                     /note="Family of unknown function (DUF5682); pfam18934"
                     /db_xref="CDD:436841"
ORIGIN      
        1 mghsdvtyfg irhhgpgsad slvqalqdlq pvavliegpi dasallplla rpemqppval
       61 lcypeedpas tsfwpfaefs peyqavlwav dkkaalrfid lpssarftaa aadgaekvdt
      121 geakeasehd dvaphrrdpi gtlaraagye dgeswwsdii eqnpepgpif aaisdamitl
      181 rdgegsiaqy eaqreahmrl eiaaarkefd gpiavvcgaw hvpalqathp qkndqallkg
      241 iarrkstmtl apwtgprlal gygygagvva pgwckhlwrt rgrrdaatlw lamiaavlrv
      301 kghlvstasl ieaerlartl aairerpkpg feelrdaaia alfngeallw alveaelllg
      361 advgeippdt plapliedlq rnqkaarlkp ealerelsvd lrsdsglfrs tllhrlnvlg
      421 vhwgkltdag rsrgtfrerw tlawepeyav rlvenliygp tiekaangrl iqmieaaatl
      481 dtlaalvqga itaglseast aglaaleara arssecleil asvppladii rygearktet
      541 nrlsglmerl ivegaialpy aardldeqaa atlasamrka deairlvepg edvldgwrng
      601 laavlegsra tallagcaah llyeagrlsa eaaagllgrr lspgtpvaea agffegffst
      661 agqrliydeg lraavdswlk sldedafiah lpllrrvfsn ldsmerrrli eavlgraarl
      721 pagltptpdg geawrrhler lgpllmggng ng
//
LOCUS       WP_258119508             476 aa            linear   BCT 02-MAR-2025
DEFINITION  putative sulfate exporter family transporter [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258119508
VERSION     WP_258119508.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015558.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03601.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..476
                     /product="putative sulfate exporter family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /calculated_mol_wt=50675
     Region          8..340
                     /region_name="YeiH"
                     /note="Uncharacterized membrane protein YadS, UPF0324
                     family [Function unknown]; COG2855"
                     /db_xref="CDD:442103"
     Region          <363..473
                     /region_name="CCP_MauG"
                     /note="Di-haem cytochrome c peroxidase; cl42173"
                     /db_xref="CDD:478002"
ORIGIN      
        1 mslaltlsha pekmrpvlpg vivaaalala agwiagglge plsrnpvlva mlfglligss
       61 facpdalrpg ldftkryllr lavvlvgfri ttrlfldlgf mplavaaiel ilvltllyai
      121 arklfrldse iallvavgsa vcgaaailsm aalvrardqs agiaialitl sgtvalltyp
      181 vmflggwlph lddrlygvfv gasifelaqv ygasfaisdd alntatlvkl skvlmlvpll
      241 lvaslvfrrr hkaqeatpip fpwfivafig vvmfnseitl npqlrrviln vdqflflmvm
      301 ialgittrvg rlgeaggawr ligvglvgva lsaalaygal ipfsatfraa spsssqsaml
      361 gshggrlfas tgcakchvpa legingevrl ysdlllhdmg palddkivqg davgaewrtt
      421 plvgirlrqr ylhdgrattl rdavfahggt aqivrdrffd ledtdrqail dfvakp
//
LOCUS       WP_258119518              96 aa            linear   BCT 02-MAR-2025
DEFINITION  TOBE domain-containing protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258119518
VERSION     WP_258119518.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 96)
  AUTHORS   Koonin,E.V., Wolf,Y.I. and Aravind,L.
  TITLE     Protein fold recognition using sequence profiles and its
            application in structural genomics
  JOURNAL   Adv Protein Chem 54, 245-275 (2000)
   PUBMED   10829230
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019998.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08402.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..96
                     /product="TOBE domain-containing protein"
                     /GO_component="GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=10708
     Region          29..>83
                     /region_name="TOBE_2"
                     /note="TOBE domain; pfam08402"
                     /db_xref="CDD:462465"
ORIGIN      
        1 mtdascyrir lrfhnsivpt gelrgkmivs irpesfrfnr dndttqsamg rvedvifigs
       61 rsfyticlad gvravgshhd aiedeidesc hsnqst
//
LOCUS       WP_258119523             386 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258119523
VERSION     WP_258119523.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13416.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..386
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=41363
     Region          28..292
                     /region_name="UgpB"
                     /note="ABC-type glycerol-3-phosphate transport system,
                     periplasmic component [Carbohydrate transport and
                     metabolism]; COG1653"
                     /db_xref="CDD:441259"
ORIGIN      
        1 msdvmlkgmt wshprgydpm vacsalwkqr tgvtvewdkr slqdfesfpv eelaraydli
       61 vidhphvgqi taenclapld vvgreaeraa laagsvgrsy psynwqgrqw afpidtasqv
      121 qawrpdmlsa apanwsdvld larqgrvllp lrpphslmvf ytlagnfgrp aaeepgdhvs
      181 pemgsrvfem mreiaalvdp aclgmdpidi leqmarsgsr iacaplvygy vsyaiagfrp
      241 nrlafadipa aghagpvgsa lggtgiavsa fskakqaaid faywiasgev qrgpyasagg
      301 qpghaaawdd avvnaatgnf ymdtratleg awvrprhdgy mtfqqaasdr inlgltekhd
      361 agrvvadlnr lfvesfpapg aagggs
//
LOCUS       WP_258119545             396 aa            linear   BCT 02-MAR-2025
DEFINITION  M24 family metallopeptidase [Mesorhizobium onobrychidis].
ACCESSION   WP_258119545
VERSION     WP_258119545.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 396)
  AUTHORS   Stuwe,T., Hothorn,M., Lejeune,E., Rybin,V., Bortfeld,M.,
            Scheffzek,K. and Ladurner,A.G.
  TITLE     The FACT Spt16 'peptidase' domain is a histone H3-H4 binding module
  JOURNAL   Proc Natl Acad Sci U S A 105 (26), 8884-8889 (2008)
   PUBMED   18579787
REFERENCE   2  (residues 1 to 396)
  AUTHORS   Rawlings,N.D. and Barrett,A.J.
  TITLE     Evolutionary families of metallopeptidases
  JOURNAL   Methods Enzymol 248, 183-228 (1995)
   PUBMED   7674922
REFERENCE   3  (residues 1 to 396)
  AUTHORS   Roderick,S.L. and Matthews,B.W.
  TITLE     Structure of the cobalt-dependent methionine aminopeptidase from
            Escherichia coli: a new type of proteolytic enzyme
  JOURNAL   Biochemistry 32 (15), 3907-3912 (1993)
   PUBMED   8471602
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012766.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00557.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..396
                     /product="M24 family metallopeptidase"
                     /calculated_mol_wt=43432
     Region          10..396
                     /region_name="ectoine_eutD"
                     /note="ectoine utilization protein EutD; TIGR02993"
                     /db_xref="CDD:274380"
ORIGIN      
        1 masasgfgtf tqaeyaqrla gvksrmekag fdliicqdpa nmcwltgydg wsfyvpqcvl
       61 vhleedrpiw fgraqdarsa rlttglpekn ivpfserlvq qpvehpydel aqlirsrgwg
      121 narigvemda hyytarchah lvsglpeahf annhdlvnwa rlvkseaelv lvreagaict
      181 qamkraiekm rpgvpqnhvi aeiyhaqimg vpgaggdyaa icplmpvgeg tstphltwsd
      241 tplpdsglai leiagvrrry haaltrtvhf gkppqaildm akaivegvda glekarpgyt
      301 aeeveaawqa vlrknglkke srvgypvgla yppdwgerta slrpgdttem qsgmcfhfma
      361 gvwlddfgia isesfvvtdh ggerlcdvar elivid
//
LOCUS       WP_258119606             105 aa            linear   BCT 02-MAR-2025
DEFINITION  2Fe-2S iron-sulfur cluster-binding protein [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258119606
VERSION     WP_258119606.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012339.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00111.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..105
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /GO_function="GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /calculated_mol_wt=10917
     Region          <3..105
                     /region_name="fer2"
                     /note="2Fe-2S iron-sulfur cluster binding domain.
                     Iron-sulfur proteins play an important role in electron
                     transfer processes and in various enzymatic reactions. The
                     family includes plant and algal ferredoxins, which act as
                     electron carriers in photosynthesis...; cl00159"
                     /db_xref="CDD:444718"
     Site            order(36..37,40,43,46..49,85..86)
                     /site_type="active"
                     /note="catalytic loop [active]"
                     /db_xref="CDD:238126"
     Site            order(40,46,49,86)
                     /site_type="other"
                     /note="iron binding site [ion binding]"
                     /db_xref="CDD:238126"
ORIGIN      
        1 mskltvikrd gthvsldgea gvsvmenirs sgideilaic ggccscatch vyvdtdasga
       61 lppmstdede llegsphrrp nsrlscqvpf saglnlisve iaped
//
LOCUS       WP_258119564             690 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Mesorhizobium onobrychidis].
ACCESSION   WP_258119564
VERSION     WP_258119564.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 690)
  AUTHORS   Woodson,K. and Devine,K.M.
  TITLE     Analysis of a ribose transport operon from Bacillus subtilis
  JOURNAL   Microbiology (Reading) 140 (Pt 8), 1829-1838 (1994)
   PUBMED   7921236
REFERENCE   2  (residues 1 to 690)
  AUTHORS   Hogg,R.W., Voelker,C. and Von Carlowitz,I.
  TITLE     Nucleotide sequence and analysis of the mgl operon of Escherichia
            coli K12
  JOURNAL   Mol Gen Genet 229 (3), 453-459 (1991)
   PUBMED   1719366
REFERENCE   3  (residues 1 to 690)
  AUTHORS   Adams,M.D., Wagner,L.M., Graddis,T.J., Landick,R., Antonucci,T.K.,
            Gibson,A.L. and Oxender,D.L.
  TITLE     Nucleotide sequence and genetic characterization reveal six
            essential genes for the LIV-I and LS transport systems of
            Escherichia coli
  JOURNAL   J Biol Chem 265 (20), 11436-11443 (1990)
   PUBMED   2195019
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014684.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02653.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..690
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=71149
     Region          63..321
                     /region_name="TM_PBP1_transp_AraH_like"
                     /note="Transmembrane subunit (TM) of Escherichia coli AraH
                     and related proteins. E. coli AraH is the TM of a
                     Periplasmic Binding Protein (PBP)-dependent ATP-Binding
                     Cassette (ABC) transporter involved in the uptake of the
                     monosaccharide arabinose. This group...; cd06579"
                     /db_xref="CDD:119321"
     Site            212..230
                     /site_type="active"
                     /note="TM-ABC transporter signature motif [active]"
                     /db_xref="CDD:119321"
     Region          391..640
                     /region_name="AraH"
                     /note="Ribose/xylose/arabinose/galactoside ABC-type
                     transport system, permease component [Carbohydrate
                     transport and metabolism]; COG1172"
                     /db_xref="CDD:440785"
ORIGIN      
        1 msaisspaaa pagtlsrlls rhsgaiiaav vfaalllvvd lvsagrltyf disflssgga
       61 tsalaaigqt lvvlsggfdl sagavislvn vvlatgmdpm atglsvvlwt lvgigvgmlv
      121 gafngffiav lrmqpivvtl stmfilqgit llvmdkpggf vspdlgafyl gdavegwlpm
      181 plvvigvvll awfwlkgtrf gtalyavgsd pdaaasvgvr vvlvrflvyv iaggcyglag
      241 vfisaqtgsg dplvgnplll smfaavvvgg trlgggqggp vgtvfgayil mmvvnillvl
      301 nvsayystia egtililavl agslshgsvl arqfraarar laawragmlp sqidridrrl
      361 riardstgdq pvvrppfhvr naetlryaap ayvclaivvi vtqiwlgrai fnvtywnslf
      421 vlssflaila lgqgsviltg gldlsvpwti glsgillagi vngsdaalay alpavlviac
      481 lvglangigi vllgispivm tlatngilqg fallysqgtp agfsspmlrw fmtgkifalt
      541 pvvlfmvafv vfavlllgrt afgrrvygig nslraaqlsg iavgrtlilv ymlsavcaai
      601 vgimltgfsg qaslgmgddy llpsiavvvv ggalitggrg hylgmlggvl lltalqmlla
      661 gttlpyatra ilyglvvlga vmalrerrlq
//
LOCUS       WP_258119643             477 aa            linear   BCT 02-MAR-2025
DEFINITION  cbb3-type cytochrome c oxidase subunit I [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258119643
VERSION     WP_258119643.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 477)
  AUTHORS   Gopalasingam,C.C., Johnson,R.M., Chiduza,G.N., Tosha,T.,
            Yamamoto,M., Shiro,Y., Antonyuk,S.V., Muench,S.P. and Hasnain,S.S.
  TITLE     Dimeric structures of quinol-dependent nitric oxide reductases
            (qNORs) revealed by cryo-electron microscopy
  JOURNAL   Sci Adv 5 (8), eaax1803 (2019)
   PUBMED   31489376
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 477)
  AUTHORS   Tsukihara,T., Aoyama,H., Yamashita,E., Tomizaki,T., Yamaguchi,H.,
            Shinzawa-Itoh,K., Nakashima,R., Yaono,R. and Yoshikawa,S.
  TITLE     The whole structure of the 13-subunit oxidized cytochrome c oxidase
            at 2.8 A
  JOURNAL   Science 272 (5265), 1136-1144 (1996)
   PUBMED   8638158
REFERENCE   3  (residues 1 to 477)
  AUTHORS   Castresana,J., Lubben,M., Saraste,M. and Higgins,D.G.
  TITLE     Evolution of cytochrome oxidase, an enzyme older than atmospheric
            oxygen
  JOURNAL   EMBO J 13 (11), 2516-2525 (1994)
   PUBMED   8013452
REFERENCE   4  (residues 1 to 477)
  AUTHORS   Papa,S., Capitanio,N., Glaser,P. and Villani,G.
  TITLE     The proton pump of heme-copper oxidases
  JOURNAL   Cell Biol Int 18 (5), 345-355 (1994)
   PUBMED   8049679
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012343.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00115.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..477
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /GO_process="GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /calculated_mol_wt=52659
     Region          21..452
                     /region_name="Heme_Cu_Oxidase_I"
                     /note="Heme-copper oxidase subunit I. Heme-copper oxidases
                     are transmembrane protein complexes in the respiratory
                     chains of prokaryotes and mitochondria which catalyze the
                     reduction of O2 and simultaneously pump protons across the
                     membrane. The superfamily is...; cl00275"
                     /db_xref="CDD:469701"
     Site            order(25,29..30,34,85,341,348,351..352,410..411,432)
                     /site_type="other"
                     /note="Low-spin heme binding site [chemical binding]"
                     /db_xref="CDD:238831"
     Site            order(44,47,55,58,117..118,124,128)
                     /site_type="active"
                     /note="D-pathway [active]"
                     /db_xref="CDD:238831"
     Site            order(195,200..201,334,338..339,410)
                     /site_type="other"
                     /note="Putative water exit pathway"
                     /db_xref="CDD:238831"
     Site            order(208,258..259,346)
                     /site_type="active"
                     /note="Binuclear center (active site) [active]"
                     /db_xref="CDD:238831"
     Site            order(208,212,223,258..259,284,287)
                     /site_type="active"
                     /note="K-pathway [active]"
                     /db_xref="CDD:238831"
     Site            order(259,338..339,410..411)
                     /site_type="other"
                     /note="Putative proton exit pathway"
                     /db_xref="CDD:238831"
ORIGIN      
        1 maetlrgrfa gidldelvnw pvvrtwlywg mfwllvapsv gvalsglfny pdylgttlel
       61 tfgrlrpvhv ngvifgafss lfigecyylv prlcgvrvpw pqwgvplawl wnvsvaaali
      121 slpfgenhgl eagefplfak ipiflvvaaa taqflitiar rlepplyval wyligafvwt
      181 tmnlvlgiil pytisginsa afhglylhyi vglwitpagy vliynflpls vgnpiyghkl
      241 slvgfwslal fypfvgihhy lyspiadwae tiaivtsmll iipvwtvlvn ffgtvmgrwd
      301 afgknlpakf limgslmylv gcfqgsteal rsiqqpthft dfvishshlt vfgtfvvwam
      361 gglvyvwpra cgrelwsftm gnwafwlitv gistmglvlt aaglqqgfqw magtewldtv
      421 ismrpywlvr tvagvsmdig mtllvinmmm taltrpaeaa egavfgaapv paggagr
//
LOCUS       WP_258119670             276 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Aeromonas dhakensis].
ACCESSION   WP_258119670
VERSION     WP_258119670.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 276)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 276)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..276
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=29809
     Region          3..275
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(10,12..13,15,34..36,82..84,132..134,147,151,
                     177..180)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187632"
     Site            order(106,134,147,151)
                     /site_type="active"
                     /db_xref="CDD:187632"
ORIGIN      
        1 msnryvlitg cssgiglaaa kalgahgfiv issarkaedv allrqqglla vrldladeas
       61 ieqgaaeala laggrlyglf nnsgygqpga ledlpteafr eqletnlfgl hhlirlvlps
      121 mlevgegrii qnssvlglva mkyrgaynas kfalegytdt lrlelagtgv hisliepgpi
      181 dtrfransrv aflrhidpaq srhqsayhqt ltrlekegps gpftlpaeac vpplvhalss
      241 rhpkarypvt fptqlfawlr rilptrllde llaksv
//
LOCUS       WP_258119658             244 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Aeromonas dhakensis].
ACCESSION   WP_258119658
VERSION     WP_258119658.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 244)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 244)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..244
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=25834
     Region          2..239
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(9,11..12,14,33..35,76..78,125..127,140,144,170..173)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187608"
     Site            order(101,127,140,144)
                     /site_type="active"
                     /db_xref="CDD:187608"
ORIGIN      
        1 msgrvlitga tsgigyqlal dyrragwqvw gcgrdgerll algrhgitpl qfdgrdanav
       61 seaaaslprv dlvilnagnc eymavnegfd galfarviet nlvatghala aflpllgagg
      121 rlaivsssvs wlplpraeay gaskaaldyl adtlrldlas kgigvtlirp gfvqtpltak
      181 ndfpmpclvp veeasraima glaagrhqih fprrfiwllr llgalptglw lrlgralvsk
      241 grps
//
LOCUS       WP_258119891             310 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Mesorhizobium onobrychidis].
ACCESSION   WP_258119891
VERSION     WP_258119891.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 310)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 310)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..310
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=34009
     Region          109..303
                     /region_name="INT_RitB_C_like"
                     /note="C-terminal catalytic domain of recombinase RitB, a
                     component of the recombinase trio; cd00797"
                     /db_xref="CDD:271178"
     Site            order(148,245,248..249,288)
                     /site_type="active"
                     /db_xref="CDD:271178"
ORIGIN      
        1 mtafarflge kaecyielrh slgyafskqa gtlrafvryv graqldapat rtmaldfvls
       61 fsgaansrai rhgvlrrfye ylavydarte rlerrafprs raipppriln eaeltslida
      121 carispsipl rgrmmatlig llassglrsg evvgldrsdv dltngvllvr ktkfrkdrlv
      181 pvhtttqaal gcyarerdaa fpipkdqgff lssrgnrlsa tglqngfaev rklagfnggk
      241 plrphdlrhr favtrlslwh qqradvqall pllatylgha sytdtayylt gsaellaiaa
      301 eraaldggaa
//
LOCUS       WP_258119943             235 aa            linear   BCT 02-MAR-2025
DEFINITION  SIMPL domain-containing protein [Aeromonas dhakensis].
ACCESSION   WP_258119943
VERSION     WP_258119943.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 235)
  AUTHORS   Vig,E., Green,M., Liu,Y., Yu,K.Y., Kwon,H.J., Tian,J., Goebl,M.G.
            and Harrington,M.A.
  TITLE     SIMPL is a tumor necrosis factor-specific regulator of nuclear
            factor-kappaB activity
  JOURNAL   J Biol Chem 276 (11), 7859-7866 (2001)
   PUBMED   11096118
REFERENCE   2  (residues 1 to 235)
  AUTHORS   Pfeuffer,T., Goebel,W., Laubinger,J., Bachmann,M. and Kuhn,M.
  TITLE     LaXp180, a mammalian ActA-binding protein, identified with the
            yeast two-hybrid system, co-localizes with intracellular Listeria
            monocytogenes
  JOURNAL   Cell Microbiol 2 (2), 101-114 (2000)
   PUBMED   11207567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016300.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04402.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..235
                     /product="SIMPL domain-containing protein"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress.; The SIMPL domain is
                     named for its presence in mouse protein SIMPL (signalling
                     molecule that associates with mouse pelle-like kinase).
                     Bacterial member BP26, from Brucella, was shown to
                     assemble into a channel-like structure, while YggE from E.
                     coli has been associated with resistance to oxidative
                     stress.; The SIMPL domain is named for its presence in
                     mouse protein SIMPL (signalling molecule that associates
                     with mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress.; The SIMPL domain is
                     named for its presence in mouse protein SIMPL (signalling
                     molecule that associates with mouse pelle-like kinase).
                     Bacterial member BP26, from Brucella, was shown to
                     assemble into a channel-like structure, while YggE from E.
                     coli has been associated with resistance to oxidative
                     stress.; The SIMPL domain is named for its presence in
                     mouse protein SIMPL (signalling molecule that associates
                     with mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress.; The SIMPL domain is
                     named for its presence in mouse protein SIMPL (signalling
                     molecule that associates with mouse pelle-like kinase).
                     Bacterial member BP26, from Brucella, was shown to
                     assemble into a channel-like structure, while YggE from E.
                     coli has been associated with resistance to oxidative
                     stress."
                     /calculated_mol_wt=25630
     Region          8..235
                     /region_name="SIMPL"
                     /note="Protein of unknown function (DUF541); cl01077"
                     /db_xref="CDD:470063"
ORIGIN      
        1 mwrplltlsa lvvsaplfai evpqaphlvv sgyaeqkaep dmltlnvsvt alekqgikak
       61 qqvdgkvaaf fgqleglgik rtdveagnlv ispeyqypqn kkpelvgyra qrqlavklyq
      121 ldklselmdt alkaglesvs qieyglktpq amkeqarlga vedarskaes lakafgmklg
      181 kvysveyrnn tpmpvysral kvaamaapaa emvdnsyqqq qisitdnvea vflle
//
LOCUS       WP_258119963             108 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258119963
VERSION     WP_258119963.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024940.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13551.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..108
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=11804
     Region          31..>108
                     /region_name="transpos_IS630"
                     /note="IS630 family transposase; NF033545"
                     /db_xref="CDD:468076"
ORIGIN      
        1 mataqgagsa aerseleglv rrrgtaqglp rraqivllas ermenkeial rlgampntvg
       61 tlrrrfaeqr ldslydeprp gaprqigdee iaetirltle ttprdath
//
LOCUS       WP_258119966             444 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease subunit S [Aeromonas dhakensis].
ACCESSION   WP_258119966
VERSION     WP_258119966.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 444)
  AUTHORS   Janscak,P. and Bickle,T.A.
  TITLE     The DNA recognition subunit of the type IB restriction-modification
            enzyme EcoAI tolerates circular permutions of its polypeptide chain
  JOURNAL   J Mol Biol 284 (4), 937-948 (1998)
   PUBMED   9837717
REFERENCE   2  (residues 1 to 444)
  AUTHORS   Bickle,T.A. and Kruger,D.H.
  TITLE     Biology of DNA restriction
  JOURNAL   Microbiol Rev 57 (2), 434-450 (1993)
   PUBMED   8336674
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013579.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01420.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..444
                     /product="restriction endonuclease subunit S"
                     /EC_number="3.1.21.-"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=49516
     Region          27..213
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
     Site            order(140,143..144,146..147,175,177,182,186,208,210..211)
                     /site_type="other"
                     /note="TRD-CR/TRD-CR interface [polypeptide binding]"
                     /db_xref="CDD:341131"
     Region          286..438
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
     Site            order(358,361..362,364..365,393,395,401,405,407,430,
                     432..433)
                     /site_type="other"
                     /note="TRD-CR/TRD-CR interface [polypeptide binding]"
                     /db_xref="CDD:341131"
ORIGIN      
        1 mqtrhdpyyy lpkfvrlear vtarstarlr dyvlalsggs tpkkeekeky yadaesgipf
       61 vrvqnlnvdg hlslddvkyv nretheglln rskvlqddll vkitgvgrma vasvppigfe
      121 gninqhiaci rtesramsea laawlntdia etlakrrstg gtrpaldypa lrsipvilda
      181 qvqkelseay aqykqaeaka nellagiddy llselgitll pepantiasr iftaqrkela
      241 gwrfdpqalh perelcidal rrlnslslks achfvrdlra eipegatyig leniesntgr
      301 fvpssekdsv ssafafrkgq vlfpklrpyl nkvffapfdg lcstefhvle ghsvssdfla
      361 lflrsqvvvk qtkhlmsgnt lprlqtedie dllipvvdpa lqekiviean rrmidadnlr
      421 skaeselnta khrietmllg evta
//
LOCUS       WP_258120019             569 aa            linear   BCT 02-MAR-2025
DEFINITION  Eco57I restriction-modification methylase domain-containing protein
            [Mesorhizobium onobrychidis].
ACCESSION   WP_258120019
VERSION     WP_258120019.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 569)
  AUTHORS   Schluckebier,G., Kozak,M., Bleimling,N., Weinhold,E. and Saenger,W.
  TITLE     Differential binding of S-adenosylmethionine S-adenosylhomocysteine
            and Sinefungin to the adenine-specific DNA methyltransferase M.TaqI
  JOURNAL   J Mol Biol 265 (1), 56-67 (1997)
   PUBMED   8995524
REFERENCE   2  (residues 1 to 569)
  AUTHORS   Janulaitis,A., Vaisvila,R., Timinskas,A., Klimasauskas,S. and
            Butkus,V.
  TITLE     Cloning and sequence analysis of the genes coding for Eco57I type
            IV restriction-modification enzymes
  JOURNAL   Nucleic Acids Res 20 (22), 6051-6056 (1992)
   PUBMED   1334261
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019291.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07669.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..569
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_process="GO:0006304 - DNA modification [Evidence IEA]"
                     /calculated_mol_wt=63817
     Region          26..243
                     /region_name="HsdM"
                     /note="Type I restriction-modification system, DNA
                     methylase subunit [Defense mechanisms]; COG0286"
                     /db_xref="CDD:440055"
     Region          <142..564
                     /region_name="YeeA"
                     /note="Type II restriction/modification system,
                     endonuclease and methylase domains [Defense mechanisms];
                     COG1002"
                     /db_xref="CDD:440626"
ORIGIN      
        1 mdgklraplq lslaglsqle pavralanae aedrgaiftr revvdfildl vgytvdqplh
       61 qqsllepsfg egdfllavvk rvfeslrasg tktnavlalk davrgvelnp atfertfsrv
      121 veamveegls erearalagv wlrsgdfllt ewaerftyvv gnppyvrqel iptiliaeyr
      181 rrfssvfdra dlyvpflehg lsllrqggrl gficadrwmk nrygaplrrl vadhyqllay
      241 vdmvdtlafh sdvvaypaif vlgnertstt rvahrpsldp nslsrlaeam rdgvannavt
      301 evggvvqgde pwildapdql avvrrleadf ppleetgcrv gigvatgadk vfigkfdeld
      361 veasrklpla msrdissgvv kwrgygvlnp fedngrlaal kdypkfaryl eehgaaikqr
      421 hvskknpssw yrtidriyrs ltykpkllfp dikgeanvvy eegrlyphhn lyvltsdewe
      481 lralqavmls siarlfvaty ttkmrggylr fqaqyvrrir lprwetvper qrqelaaaas
      541 agdhercnaa varlykltaa ervalgmeg
//
LOCUS       WP_258120070             309 aa            linear   BCT 02-MAR-2025
DEFINITION  ROK family protein [Aeromonas dhakensis].
ACCESSION   WP_258120070
VERSION     WP_258120070.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..309
                     /product="ROK family protein"
                     /calculated_mol_wt=32791
     Region          8..298
                     /region_name="ASKHA_NBD_ROK_EcFRK-like"
                     /note="nucleotide-binding domain (NBD) of Escherichia coli
                     fructokinase (FRK) and similar proteins; cd24066"
                     /db_xref="CDD:466916"
ORIGIN      
        1 msnrlldwgi dlggtkcecv vlegdevllr hripteragg ydhmigqiak lvaecadklg
       61 qrpaligmgt pgardpqtgl mkncntteln grpfkedler rlgvpvlian dancfalaet
      121 hlgavrqhhp dakvvfgiim gtgvgsgivi ngrilnghhg iagewghnvl spdgpecycg
      181 krgcvetfis gpaleawyea kakrrlplak iaavtahdhv akltidrlhl lfgqalanvv
      241 nildpdvivi gggvgnvqsl yragretilp flfnprfatp iiapalgdsa gvfgaallar
      301 gefqdalls
//
LOCUS       WP_258119645             553 aa            linear   BCT 02-MAR-2025
DEFINITION  cbb3-type cytochrome c oxidase subunit II [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258119645
VERSION     WP_258119645.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 553)
  AUTHORS   Marchal,K., Sun,J., Keijers,V., Haaker,H. and Vanderleyden,J.
  TITLE     A cytochrome cbb3 (cytochrome c) terminal oxidase in Azospirillum
            brasilense Sp7 supports microaerobic growth
  JOURNAL   J Bacteriol 180 (21), 5689-5696 (1998)
   PUBMED   9791120
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014486.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02433.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..553
                     /product="cbb3-type cytochrome c oxidase subunit II"
                     /calculated_mol_wt=61036
     Region          <50..240
                     /region_name="FixO"
                     /note="Cytochrome C oxidase, mono-heme subunit/FixO;
                     cl46552"
                     /db_xref="CDD:480892"
     Region          <211..356
                     /region_name="TsdA"
                     /note="Thiosulfate dehydrogenase TsdA, contains C-terminal
                     cytochrome c domain [Inorganic ion transport and
                     metabolism]; COG3258"
                     /db_xref="CDD:442489"
     Region          316..488
                     /region_name="CccA"
                     /note="Cytochrome c, mono- and diheme variants [Energy
                     production and conversion]; COG2010"
                     /db_xref="CDD:441613"
ORIGIN      
        1 magifcffaa litqgflpff epsartnrvt avvrtdfgql kwmmtqatdy tplqklgrdv
       61 ylregcwych sqyvrpvtge trrwgpvtes gefaydvphl fgtrrigpdl mrvglkfsde
      121 whlahfwnpr mlspdsimap yrglfdtpeq pvkivddgag nrtlertpvs eglfdfaske
      181 qikltpnadg llfvpmqarg kapvivipne eykgdavkia aetkdlegli ayiqklgmdr
      241 gkwrdlfepq qlevtevtfp rssewiahgr evyerrclgc hgvngdgngp aatflykqrp
      301 rsfaaavfkf rltkeplptd gdllrtitrg vrgtampawy elpltdrlav iqyikyelav
      361 drsdpaepya ffieeppgpp lyigkpptvs qailergkev wkiakcwech gqggkgdgqk
      421 aaglkddlgf silpadltsg qfksgsaved ifrtmttgls gtpmpsyrds lpeedrwals
      481 yyvlalsayk dplagaplai adkdraalne ltleagspdk ayvpggvpaq ntselgegng
      541 gsvtekqnaa egg
//
LOCUS       WP_258120147              74 aa            linear   BCT 02-MAR-2025
DEFINITION  site-specific integrase [Mesorhizobium onobrychidis].
ACCESSION   WP_258120147
VERSION     WP_258120147.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 74)
  AUTHORS   Subramanya,H.S., Arciszewska,L.K., Baker,R.A., Bird,L.E.,
            Sherratt,D.J. and Wigley,D.B.
  TITLE     Crystal structure of the site-specific recombinase, XerD
  JOURNAL   EMBO J 16 (17), 5178-5187 (1997)
   PUBMED   9311978
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014898.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02899.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..74
                     /product="site-specific integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=8366
     Region          9..>69
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
ORIGIN      
        1 mkdesllgpw irrfllehlv aernlsrntq asyrdtltll lpfaskqggr aidrmtveel
       61 tpaivrkflr psat
//
LOCUS       WP_258120156              96 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Mesorhizobium onobrychidis].
ACCESSION   WP_258120156
VERSION     WP_258120156.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02371.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..96
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=10726
     Region          <12..>93
                     /region_name="COG3547"
                     /note="Transposase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:442768"
ORIGIN      
        1 mptyagksqd wlneqvvped erlaikrhlr efdrlgedlr vierdlarsa landdakrli
       61 tipgvdmtva lattaaigev srfneppklv sylehl
//
LOCUS       WP_258120211              82 aa            linear   BCT 02-MAR-2025
DEFINITION  biotin/lipoyl-containing protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258120211
VERSION     WP_258120211.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012584.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00364.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..82
                     /product="biotin/lipoyl-containing protein"
                     /calculated_mol_wt=8435
     Region          5..>82
                     /region_name="PRK11856"
                     /note="branched-chain alpha-keto acid dehydrogenase
                     subunit E2; Reviewed"
                     /db_xref="CDD:237001"
ORIGIN      
        1 mdikmttdii lpssgmgiee ativrwlksi gdevsegeiv vevetakatv eieapasgrl
       61 ativapvgkt veinavigti ea
//
LOCUS       WP_258120226              53 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258120226
VERSION     WP_258120226.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 53)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 53)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..53
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..53
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=5308
     Region          19..>50
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mnlqneilsn kradgaggrl ldkvavitga asgigkeial sfaregarvv rgs
//
LOCUS       WP_258120235             501 aa            linear   BCT 02-MAR-2025
DEFINITION  pyridoxal-dependent decarboxylase [Aeromonas dhakensis].
ACCESSION   WP_258120235
VERSION     WP_258120235.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 501)
  AUTHORS   Viguera,E., Trelles,O., Urdiales,J.L., Mates,J.M. and
            Sanchez-Jimenez,F.
  TITLE     Mammalian L-amino acid decarboxylases producing 1,4-diamines:
            analogies among differences
  JOURNAL   Trends Biochem Sci 19 (8), 318-319 (1994)
   PUBMED   7940675
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012503.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00282.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         1..501
                     /product="pyridoxal-dependent decarboxylase"
                     /GO_function="GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA]"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0019752 - carboxylic acid metabolic
                     process [Evidence IEA]"
                     /calculated_mol_wt=55210
     Region          49..491
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(154..155,158,247,276,279,305,308)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:99743"
     Site            308
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99743"
ORIGIN      
        1 mkltelfaqp dpafgqamtd lletfhhsdd sqapyqrdqf thqleqsgmp etglamadyl
       61 trlatlvpga shltsprymg hmtaplpaft aelsrlvvml nqnpmkmess rllsflerev
      121 laklhrlvyr adedfygthm hakdaalgvm tsggtianvt alwlarnrac gdnlfalyeq
      181 gyrgavilgs rlmhysfdkg mdllglgars vwrletdqhn rlslaaleqa laqckeqklk
      241 vlalvgvags tdfgsidplp elaaiaareq ihfhvdaawg gptlfspryq gllagiehad
      301 tvtldghkql lvplgtgmll crqpdlmmav kreapyaira ssfdqgrftl egtrpanaly
      361 ldaafqlfgq qgyaeliean ydrarlmasl idqdpafelm sapvmnllsy rcipphlqgk
      421 vldeaaneqv nafnvalqka qraeghsfvs rtqravgryg aqpltllrav llnplieerh
      481 irdlladqkr lgdeiagqlf g
//
LOCUS       WP_258120250             162 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF269 domain-containing protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258120250
VERSION     WP_258120250.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03270.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..162
                     /product="DUF269 domain-containing protein"
                     /calculated_mol_wt=17723
     Region          20..141
                     /region_name="DUF269"
                     /note="Protein of unknown function, DUF269; cl03973"
                     /db_xref="CDD:446249"
ORIGIN      
        1 mphapvgpav nkddealarp fvkcllrlir tqdsfglweg nsdaellaef iitkeqrhat
       61 pvigdhdpda lwrldmfyta valaieersg vststiigmk pvgasggwsv crdvhrfgfe
      121 tfrklaeagt klvddataat rslardsark ekhcsrkdlc qt
//
LOCUS       WP_258120334             224 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase [Mesorhizobium onobrychidis].
ACCESSION   WP_258120334
VERSION     WP_258120334.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 224)
  AUTHORS   Mullin,D.A., Zies,D.L., Mullin,A.H., Caballera,N. and Ely,B.
  TITLE     Genetic organization and transposition properties of IS511
  JOURNAL   Mol Gen Genet 254 (4), 456-463 (1997)
   PUBMED   9180700
REFERENCE   2  (residues 1 to 224)
  AUTHORS   Fischer,J., Maier,H., Viell,P. and Altenbuchner,J.
  TITLE     The use of an improved transposon mutagenesis system for DNA
            sequencing leads to the characterization of a new insertion
            sequence of Streptomyces lividans 66
  JOURNAL   Gene 180 (1-2), 81-89 (1996)
   PUBMED   8973350
REFERENCE   3  (residues 1 to 224)
  AUTHORS   Zekri,S. and Toro,N.
  TITLE     Identification and nucleotide sequence of Rhizobium meliloti
            insertion sequence ISRm6, a small transposable element that belongs
            to the IS3 family
  JOURNAL   Gene 175 (1-2), 43-48 (1996)
   PUBMED   8917074
  REMARK    Erratum:[Gene 1997 Mar 25;188(1):149]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01527.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..224
                     /product="transposase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /GO_process="GO:0006313 - DNA transposition [Evidence
                     IEA]"
                     /calculated_mol_wt=24931
     Region          <6..168
                     /region_name="valS"
                     /note="valyl-tRNA synthetase; Provisional; PRK14900"
                     /db_xref="CDD:237855"
     Region          144..>224
                     /region_name="transpos_IS3"
                     /note="IS3 family transposase; NF033516"
                     /db_xref="CDD:468052"
ORIGIN      
        1 mrrqtraftv eirqkrssqk rsrsiwsdvd lsaamaettr elnemelpnr rlidssvvai
       61 daeqihksra eylmanplev esvtatesaa kvetpekkka prsrkakaep kpparknaan
      121 tpsqaekapa aavrrkiyse keraqmlaqi eksisggath ksavkqagis eqtyyqwkka
      181 aapasdgdnl kdlvaleeen krlksllaer lrkenaelkr klgl
//
LOCUS       WP_258120374             304 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR family transcriptional regulator [Mesorhizobium onobrychidis].
ACCESSION   WP_258120374
VERSION     WP_258120374.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012354.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00126.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..304
                     /product="LysR family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=33673
     Region          8..290
                     /region_name="PRK11139"
                     /note="DNA-binding transcriptional activator GcvA;
                     Provisional"
                     /db_xref="CDD:182990"
ORIGIN      
        1 maeekdlsln avrafvqvar dktvtraskt lgitqssvsr hiavleeyfg akllerrgrq
       61 sqltdfgrlf adavaeplet ilftamrmrr rgdrkdanrl vvrtslstfa ytllipnlsd
      121 fskemggvtv dvistlsapa sddsfdvllt rdltvsepad rwdfydehlv cvgspncvag
      181 rglealrttp miavtsrpdi lpiwlrgmdl ktsdilsgar ydhhylalpa vttgqtllvt
      241 pyiivadlir qclldvlpgs rapsgmqyra yavdrsgnpd larafcrwlt rlcrkkteee
      301 stgk
//
LOCUS       WP_258120495             116 aa            linear   BCT 02-MAR-2025
DEFINITION  contractile injection system protein, VgrG/Pvc8 family, partial
            [Aeromonas dhakensis].
ACCESSION   WP_258120495
VERSION     WP_258120495.1
KEYWORDS    RefSeq.
SOURCE      Aeromonas dhakensis
  ORGANISM  Aeromonas dhakensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (residues 1 to 116)
  AUTHORS   Christie,G.E. and Calendar,R.
  TITLE     Bacteriophage P2
  JOURNAL   Bacteriophage 6 (1), e1145782 (2016)
   PUBMED   27144088
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 116)
  AUTHORS   Gloor,G. and Chaconas,G.
  TITLE     Sequence of bacteriophage Mu N and P genes
  JOURNAL   Nucleic Acids Res 16 (11), 5211-5212 (1988)
   PUBMED   2968539
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05954.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Aeromonas dhakensis"
                     /db_xref="taxon:196024"
     Protein         <1..>116
                     /product="contractile injection system protein, VgrG/Pvc8
                     family"
     Region          <2..>116
                     /region_name="VI_Rhs_Vgr"
                     /note="type VI secretion system Vgr family protein;
                     TIGR03361"
                     /db_xref="CDD:274542"
ORIGIN      
        1 sgkafaqhrl dalrndavsg sgksnsaall pgqsfslteh pngslntdwq ivnirhtgeq
       61 pqaleeeggs gptvyhnefg vvkasttwra rigspeaphk pmvdgpqiai vvgpdg
//
LOCUS       WP_258120529            1162 aa            linear   BCT 02-MAR-2025
DEFINITION  PAS domain-containing hybrid sensor histidine kinase/response
            regulator [Mesorhizobium onobrychidis].
ACCESSION   WP_258120529
VERSION     WP_258120529.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 1162)
  AUTHORS   Stuffle,E.C., Johnson,M.S. and Watts,K.J.
  TITLE     PAS domains in bacterial signal transduction
  JOURNAL   Curr Opin Microbiol 61, 8-15 (2021)
   PUBMED   33647528
REFERENCE   2  (residues 1 to 1162)
  AUTHORS   Gao,R., Bouillet,S. and Stock,A.M.
  TITLE     Structural Basis of Response Regulator Function
  JOURNAL   Annu Rev Microbiol 73, 175-197 (2019)
   PUBMED   31100988
REFERENCE   3  (residues 1 to 1162)
  AUTHORS   Ortet,P., Whitworth,D.E., Santaella,C., Achouak,W. and Barakat,M.
  TITLE     P2CS: updates of the prokaryotic two-component systems database
  JOURNAL   Nucleic Acids Res 43 (Database issue), D536-D541 (2015)
   PUBMED   25324303
REFERENCE   4  (residues 1 to 1162)
  AUTHORS   Attwood,P.V.
  TITLE     Histidine kinases from bacteria to humans
  JOURNAL   Biochem Soc Trans 41 (4), 1023-1028 (2013)
   PUBMED   23863173
REFERENCE   5  (residues 1 to 1162)
  AUTHORS   Galperin,M.Y.
  TITLE     Diversity of structure and function of response regulator output
            domains
  JOURNAL   Curr Opin Microbiol 13 (2), 150-159 (2010)
   PUBMED   20226724
REFERENCE   6  (residues 1 to 1162)
  AUTHORS   Galperin,M.Y.
  TITLE     Structural classification of bacterial response regulators:
            diversity of output domains and domain combinations
  JOURNAL   J Bacteriol 188 (12), 4169-4182 (2006)
   PUBMED   16740923
REFERENCE   7  (residues 1 to 1162)
  AUTHORS   Hefti,M.H., Francoijs,K.J., de Vries,S.C., Dixon,R. and Vervoort,J.
  TITLE     The PAS fold. A redefinition of the PAS domain based upon
            structural prediction
  JOURNAL   Eur J Biochem 271 (6), 1198-1208 (2004)
   PUBMED   15009198
REFERENCE   8  (residues 1 to 1162)
  AUTHORS   Dutta,R. and Inouye,M.
  TITLE     GHKL, an emergent ATPase/kinase superfamily
  JOURNAL   Trends Biochem Sci 25 (1), 24-28 (2000)
   PUBMED   10637609
REFERENCE   9  (residues 1 to 1162)
  AUTHORS   Stock,A.M., Robinson,V.L. and Goudreau,P.N.
  TITLE     Two-component signal transduction
  JOURNAL   Annu Rev Biochem 69, 183-215 (2000)
   PUBMED   10966457
REFERENCE   10 (residues 1 to 1162)
  AUTHORS   Stock,J.
  TITLE     Signal transduction: Gyrating protein kinases
  JOURNAL   Curr Biol 9 (10), R364-R367 (1999)
   PUBMED   10339418
REFERENCE   11 (residues 1 to 1162)
  AUTHORS   Ponting,C.P. and Aravind,L.
  TITLE     PAS: a multifunctional domain family comes to light
  JOURNAL   Curr Biol 7 (11), R674-R677 (1997)
   PUBMED   9382818
REFERENCE   12 (residues 1 to 1162)
  AUTHORS   Alex,L.A. and Simon,M.I.
  TITLE     Protein histidine kinases and signal transduction in prokaryotes
            and eukaryotes
  JOURNAL   Trends Genet 10 (4), 133-138 (1994)
   PUBMED   8029829
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11586208
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..1162
                     /product="PAS domain-containing hybrid sensor histidine
                     kinase/response regulator"
                     /EC_number="2.7.13.3"
                     /GO_function="GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA]"
                     /GO_function="GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=126502
     Region          6..515
                     /region_name="SLC5sbd"
                     /note="Solute carrier 5 family, sodium/glucose
                     transporters and related proteins; solute-binding domain;
                     cd10322"
                     /db_xref="CDD:271357"
     Site            order(46,49,341,344..345)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271357"
     Region          649..758
                     /region_name="PAS_7"
                     /note="PAS fold; pfam12860"
                     /db_xref="CDD:432837"
     Region          744..1017
                     /region_name="BaeS"
                     /note="Signal transduction histidine kinase [Signal
                     transduction mechanisms]; COG0642"
                     /db_xref="CDD:440407"
     Region          1036..1154
                     /region_name="CheY"
                     /note="CheY-like REC (receiver) domain, includes
                     chemotaxis protein CheY and sporulation regulator Spo0F
                     [Signal transduction mechanisms]; COG0784"
                     /db_xref="CDD:440547"
ORIGIN      
        1 mqgwfiviia iayvtllfvi aslgdrrstt sgpdrarpfi yalslaiyct swtffgsvgl
       61 ssergleflg iyigpvlvfv fgfpllrriv rlaktekits iadflgaryg ksfavaaiat
      121 liatigavpy malqlkaisg svslmvehyt gsppsfdpfv sdislvvaml lalfavlfgt
      181 rhadatehqd glvlavavet vvklaaflai glmvtflifg gpgdmvdkla qnsqvqqamg
      241 yrtslatwlv ltclsgfaii mlprqfyvti venrseaelr tatwvfplyl vainlfvlpi
      301 alaglalvgt rtssdlyvls lpllsghdvl amaafiggls aatamvives valsimisnd
      361 lviplfvrrl lktttsened wsalilnvrr aaifimlfia flyyrestds arlssiglms
      421 faaiaqfapa liggliwrga ngrgaalgmv agivvwsytl llpslaasdt givvhglfgf
      481 ealrpqalfg tvaeplnhgv lwslsvntlf fvlgslsras vpleriqasi fvpreaspmp
      541 slrrfrttvt vndlkdtiar ylgverters fqsfeksnga slhgneqasm dvirfseqll
      601 asavgsssar lilslllrrn dreskdafrl lddatealqh nrdllqiald qmeqgitvfd
      661 rdfrlicwnr qyralfdlpd emgqvgvsld rilrhlaerg dipadqrvtm lnrltsfvsp
      721 wqmelktsgr ilelrsnpmp dggivatyad isgrveqdla lkranesleq rvkdrtvelt
      781 rvneelaqaq mlaeeanlgk trflaaaghd ilqplnaarl ycssliekag kgptgkaann
      841 iesslesvet ilgavldisr ldagamkpdd tvfsldellr qigndfqpla aerklgltim
      901 psslsvmtdr nllrrliqnl vsnaikytrr grvlvgvrrr gelaeievid tgigiaadkl
      961 ntvfheftrl degareadgl glglsivdri arvlrlelqi fsnpgrgtrf svilpvaaaq
     1021 eprrvvtaka pvrtgaslag lrvlcidnda rildgmrlll egwgcsvetl agsgdlersg
     1081 mrrpdivlad yhldgetgle miaklraihg qdmpavlvta drssevrasa grldvpvink
     1141 plkpavlrsm marvrplasa ae
//
LOCUS       WP_258120653             335 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Mesorhizobium onobrychidis].
ACCESSION   WP_258120653
VERSION     WP_258120653.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012738.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00528.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..335
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=36363
     Region          1..333
                     /region_name="TM_PBP2"
                     /note="Transmembrane subunit (TM) found in Periplasmic
                     Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
                     transporters which generally bind type 2 PBPs. These types
                     of transporters consist of a PBP, two TMs, and two
                     cytoplasmic ABC ATPase subunits, and...; cl00427"
                     /db_xref="CDD:444901"
     Site            order(112..113,116..117,122,133..136,138..147,150..151,
                     153,212..213,215,217,220..221,223,227..228,231,248,
                     262..263,266,273..276,279..280,289..290,300..301,304..305,
                     307..308,311..312,315)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:119394"
     Site            order(139..153,273..278)
                     /site_type="active"
                     /note="conserved gate region [active]"
                     /db_xref="CDD:119394"
     Site            order(153,207,279,287,290,300)
                     /site_type="active"
                     /note="putative PBP binding loops [active]"
                     /db_xref="CDD:119394"
     Site            order(232..244,250..251,255)
                     /site_type="active"
                     /note="ABC-ATPase subunit interface [active]"
                     /db_xref="CDD:119394"
ORIGIN      
        1 mlryllhkla liiptvfgis laafafvrll pgdpimalag ergvsperya elverfgynr
       61 pyvvqyleyi grvltgdfgi siatkrpvlg efqalfpatl elatialiia vligipagif
      121 aavkrgswfd qatmgvaltg ysmpifwwgl lliiffsgyl gwtpvsgrig lqyffkpttg
      181 fmlidslisg ksgafrsaas hlvlpaivla tiplaviarq trsamlevlg edyvrtarak
      241 glaprrvigl hafrnalipv vttiglqvgt lmagailtet ifswpgigkw midaiakrdy
      301 vvvqsgllii alivmavnli vdvlyavinp rirvq
//
LOCUS       WP_258120696              84 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6356 family protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258120696
VERSION     WP_258120696.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040386.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19883.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..84
                     /product="DUF6356 family protein"
                     /calculated_mol_wt=9459
     Region          7..69
                     /region_name="DUF6356"
                     /note="Family of unknown function (DUF6356); pfam19883"
                     /db_xref="CDD:437715"
ORIGIN      
        1 mtiplsrlft shpakvgety fshmafaawf csrlfmaafa alihaflpfl fettasrivr
       61 elyerthnrg thaikepaal mdra
//
LOCUS       WP_258120739             486 aa            linear   BCT 02-MAR-2025
DEFINITION  GMC oxidoreductase [Mesorhizobium onobrychidis].
ACCESSION   WP_258120739
VERSION     WP_258120739.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05199.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..486
                     /product="GMC oxidoreductase"
                     /GO_function="GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /calculated_mol_wt=53602
     Region          11..467
                     /region_name="BetA"
                     /note="Choline dehydrogenase or related flavoprotein
                     [Lipid transport and metabolism, General function
                     prediction only]; COG2303"
                     /db_xref="CDD:441878"
ORIGIN      
        1 mvlgirpeqi anehfdlvav gsgfgsaffl hafakqrkar illlewgrhn thewqleqnv
       61 ntdiedetty ktnsdkpwny tiglgggtnc wfaqtprfhp ndfrlkslyg vgndwpisyd
      121 elepfycdae dvmsisgdpd maammprsrp fpqpphhmst pdrmmkaaqp dqhfvvptar
      181 arvptaqrss ccanlrcglc pvdakftann glmhvfehpd vsvclgaevr rldhvggsvr
      241 svtfvhdgke ysvsgdlfil ganaiqspai mlrsglsgef vgrglhesyg wnfeayldgv
      301 dnfdgstitt glnfglydgs hrsqhaaalv yfenrwqhgm rpekgrvrqt lpliivtenl
      361 lepenlvild edenafisfk gasdyavkgm arakeklpal laplpveaif drgirrtesh
      421 vqgtlrmgvs padsvvdrdm ihhrlrnlvv vgsstypscs canpsltaaa lslraasria
      481 gkemag
//
LOCUS       WP_258120748             447 aa            linear   BCT 02-MAR-2025
DEFINITION  glucoamylase family protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258120748
VERSION     WP_258120748.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021596.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10091.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..447
                     /product="glucoamylase family protein"
                     /calculated_mol_wt=50463
     Region          6..434
                     /region_name="COG5368"
                     /note="Endo-beta-1,2-glucanase, glucoamylase superfamily
                     [Carbohydrate transport and metabolism]"
                     /db_xref="CDD:444138"
ORIGIN      
        1 mlrvepplsd edlldrfqca afgyfletmn penglvadts rpnwpasiav vgfalscypv
       61 gvergwmtrd taakltlaal rffwnsrqgn gdnvtghkgf yyhfldmqtg lrawrcelsm
      121 vdtallmagv lvagayftgd ndeeteirel aevlyrrvdw rwaqgsnstl rqgwrpksgf
      181 lrygwegyne atmlyvlama apdkpasdds yagwtatyqw eniygydvly ggplfmhqfs
      241 hawidfdgir dafmreknsd yfensrraty lhrdyarhnp sgydgygegl wglsagdgpg
      301 nfraqierrp rkfsgyaarg apfgpddgti apwsylaslp fapeiclpal rhlrerhpev
      361 idsfrmpsgf nptlanrrkf gpsgwisdah ygldqgivvl mienhrsrli wdlmrssphi
      421 rrglckagfs ggwlsqpasl lprtsae
//
LOCUS       WP_258120381              82 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6074 family protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258120381
VERSION     WP_258120381.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 82)
  AUTHORS   Xu,L., Cheng,R., Li,J., Wang,Y., Zhu,B., Ma,S., Zhang,W., Dong,W.,
            Wang,S. and Zhang,J.
  TITLE     Identification of substituent groups and related genes involved in
            salecan biosynthesis in Agrobacterium sp. ZX09
  JOURNAL   Appl Microbiol Biotechnol 101 (2), 585-598 (2017)
   PUBMED   27678113
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039341.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19551.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..82
                     /product="DUF6074 family protein"
                     /calculated_mol_wt=8913
     Region          6..>63
                     /region_name="DUF6074"
                     /note="Family of unknown function (DUF6074); pfam19551"
                     /db_xref="CDD:437383"
ORIGIN      
        1 mgesniiafp lhrrrklveg iarvleskdg edanafwrst vktilvqlse sgigpglaeq
       61 eigmllrsvl rdiatrsakl ar
//
LOCUS       WP_258120925             421 aa            linear   BCT 02-MAR-2025
DEFINITION  ESPR-type extended signal peptide-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_258120925
VERSION     WP_258120925.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 421)
  AUTHORS   Leyton,D.L., Rossiter,A.E. and Henderson,I.R.
  TITLE     From self sufficiency to dependence: mechanisms and factors
            important for autotransporter biogenesis
  JOURNAL   Nat Rev Microbiol 10 (3), 213-225 (2012)
   PUBMED   22337167
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 421)
  AUTHORS   Desvaux,M., Scott-Tucker,A., Turner,S.M., Cooper,L.M., Huber,D.,
            Nataro,J.P. and Henderson,I.R.
  TITLE     A conserved extended signal peptide region directs
            posttranslational protein translocation via a novel mechanism
  JOURNAL   Microbiology (Reading) 153 (Pt 1), 59-70 (2007)
   PUBMED   17185535
REFERENCE   3  (residues 1 to 421)
  AUTHORS   Desvaux,M., Cooper,L.M., Filenko,N.A., Scott-Tucker,A.,
            Turner,S.M., Cole,J.A. and Henderson,I.R.
  TITLE     The unusual extended signal peptide region of the type V secretion
            system is phylogenetically restricted
  JOURNAL   FEMS Microbiol Lett 264 (1), 22-30 (2006)
   PUBMED   17020545
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024418.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13018.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>421
                     /product="ESPR-type extended signal peptide-containing
                     protein"
     Region          1..>421
                     /region_name="auto_AIDA-I"
                     /note="autotransporter adhesin AIDA-I; NF033176"
                     /db_xref="CDD:380183"
ORIGIN      
        1 mnkiynivwn essgmwvvts eltrkggqrh rkikrtmlag liaglmlpvi pamaqmyndk
       61 tleysdsame lsagdtatnt tinggeqyis sggnatstti negvqivfdg glatntiidg
      121 gdqyissggn aidttiengy qtvfsggnat stiinggfqe vssggsatsa iinagfqtly
      181 dnsiasstvi nngfqlissg gssvdttiqg giqevgeggs asattindgf qillsggsat
      241 nttinngwqd issggsatqt iisggiqtiy dggsaseiti nsgyqvissg gsvttttiyr
      301 ggeqsitnag latgtiirgg eqrvssggsa vdttieeglq tvlnggnvsg thisggeqrv
      361 ssggsavdtt ieegfqtvln ggnvsgthis ggeqnissgg savdttieeg fqtvlnggnv
      421 s
//
LOCUS       WP_258120816             340 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258120816
VERSION     WP_258120816.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 340)
  AUTHORS   Swint-Kruse,L. and Matthews,K.S.
  TITLE     Allostery in the LacI/GalR family: variations on a theme
  JOURNAL   Curr Opin Microbiol 12 (2), 129-137 (2009)
   PUBMED   19269243
REFERENCE   2  (residues 1 to 340)
  AUTHORS   Fukami-Kobayashi,K., Tateno,Y. and Nishikawa,K.
  TITLE     Parallel evolution of ligand specificity between LacI/GalR family
            repressors and periplasmic sugar-binding proteins
  JOURNAL   Mol Biol Evol 20 (2), 267-277 (2003)
   PUBMED   12598694
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13377.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..340
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=36879
     Site            order(12..16,18..19,22,27..28,31,44,47,50..51,53..54)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143331"
     Region          13..67
                     /region_name="HTH_XRE"
                     /note="Helix-turn-helix XRE-family like proteins.
                     Prokaryotic DNA binding proteins belonging to the
                     xenobiotic response element family of transcriptional
                     regulators; cl22854"
                     /db_xref="CDD:473980"
     Site            44..53
                     /site_type="active"
                     /note="domain linker motif [active]"
                     /db_xref="CDD:143331"
     Region          60..330
                     /region_name="PBP1_AglR-like"
                     /note="Ligand-binding domain of DNA transcription
                     repressor specific for alpha-glucosides (AglR) and similar
                     proteins; cd20010"
                     /db_xref="CDD:380665"
     Site            order(65,78..79,81..83,86,94..97,99,117,225,228,250,257)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:380665"
     Site            order(76,80,145..146,158..161,197,248,276)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:380665"
ORIGIN      
        1 mnlkqlshml alsqttvsra lngypevnee trrrvidaak rhgyrpnpsa rrlatgktgm
       61 igyvlptgta vdidphfvef lsglgdyars heldlvlspa daddqettyr rivanrqvda
      121 vyissprpad rrvalvstlg ipfivhgrse gldfdypftd idnegafhea arllvqlghr
      181 rlalingddr etfaihrehg vrralaasgl algeghvcsl amteengyra arrlleqsda
      241 ptaiacssli malgvvravr dlgltipgdl sliahddvfp wlkpenfsvp lsttrssirl
      301 agariaerla arisgleega rgevwpvdlv irgsvagapt
//
LOCUS       WP_258120913             215 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258120913
VERSION     WP_258120913.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 215)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 215)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..215
                     /product="VOC family protein"
                     /calculated_mol_wt=24176
     Region          96..210
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mpnlenlkkq akqylrwhre ryypvaaqir aalprfqhld dtqilessfk lndaqelvar
       61 qlgfegwqal ksgahvmttq srqnaprpil ssasaqlfvs dikascgffa dklgfaidfv
      121 ygdppfygqv irdkaqlalr lvcepvfvdd irqrehllsa sitvdtasei krlfldfqaa
      181 gvdfhqtlkk epwgarnfii ldpdgnlilf agpad
//
LOCUS       WP_258121071             304 aa            linear   BCT 02-MAR-2025
DEFINITION  nitrilase-related carbon-nitrogen hydrolase [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258121071
VERSION     WP_258121071.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   Pace,H.C. and Brenner,C.
  TITLE     The nitrilase superfamily: classification, structure and function
  JOURNAL   Genome Biol 2 (1), REVIEWS0001 (2001)
   PUBMED   11380987
REFERENCE   2  (residues 1 to 304)
  AUTHORS   Bork,P. and Koonin,E.V.
  TITLE     A new family of carbon-nitrogen hydrolases
  JOURNAL   Protein Sci 3 (8), 1344-1346 (1994)
   PUBMED   7987228
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012993.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00795.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..304
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /GO_process="GO:0008152 - metabolic process [Evidence
                     IEA]"
                     /calculated_mol_wt=33531
     Region          2..302
                     /region_name="nitrilase"
                     /note="Nitrilase superfamily, including nitrile- or
                     amide-hydrolyzing enzymes and amide-condensing enzymes;
                     cl11424"
                     /db_xref="CDD:448250"
     Site            order(47,127,131,145,171..172,174..175,196)
                     /site_type="active"
                     /db_xref="CDD:143587"
     Site            order(47,127,171)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:143587"
     Site            order(128..131,144,151..153,172,174..178,181..182,
                     217..218,220..222,224..225,246..247,290..293)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143587"
ORIGIN      
        1 mardltiavc qtgpvqksaq rsetvdrlva llekaaaaga eiavfpelal ttffprwrid
       61 dqaeieaffe pampgpqtqr lydtaarlki gfalgyaelt rvdgvtrrfn tmdlvgqdgk
      121 lvgryrkihv pgssepepgt tvhlerryfe pgnlgfpvfv yrgvrvgmai cndrrwpety
      181 rmlclngaei vvigyntpll ldeapalahl rmfhnhlpmq agayqntvwv aaaakagved
      241 gqaliggsci iaptgeiaaq amslddeviv hradldliav crkvnfdfar yrrpdqyrli
      301 adqv
//
LOCUS       WP_258121086             120 aa            linear   BCT 02-MAR-2025
DEFINITION  PerC family transcriptional regulator, partial [Escherichia coli].
ACCESSION   WP_258121086
VERSION     WP_258121086.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 120)
  AUTHORS   Gomez-Duarte,O.G. and Kaper,J.B.
  TITLE     A plasmid-encoded regulatory region activates chromosomal eaeA
            expression in enteropathogenic Escherichia coli
  JOURNAL   Infect Immun 63 (5), 1767-1776 (1995)
   PUBMED   7729884
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06069.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..120
                     /product="PerC family transcriptional regulator"
     Region          56..>103
                     /region_name="PerC"
                     /note="PerC transcriptional activator; pfam06069"
                     /db_xref="CDD:310570"
ORIGIN      
        1 qsgrvahrce gdtrrhfprl teraqepepq pvretrpvrk fyvgtndprv ilcltrqaee
       61 lesrglyrra atvwmaafre shsqpernnf larrerclrk sskraasgee wylsgnyvga
//
LOCUS       WP_258121173             145 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail sheath C-terminal domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_258121173
VERSION     WP_258121173.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 145)
  AUTHORS   Aksyuk,A.A., Kurochkina,L.P., Fokine,A., Forouhar,F.,
            Mesyanzhinov,V.V., Tong,L. and Rossmann,M.G.
  TITLE     Structural conservation of the myoviridae phage tail sheath protein
            fold
  JOURNAL   Structure 19 (12), 1885-1894 (2011)
   PUBMED   22153511
REFERENCE   2  (residues 1 to 145)
  AUTHORS   Xue,Q. and Egan,J.B.
  TITLE     Tail sheath and tail tube genes of the temperate coliphage 186
  JOURNAL   Virology 212 (1), 218-221 (1995)
   PUBMED   7676633
REFERENCE   3  (residues 1 to 145)
  AUTHORS   Temple,L.M., Forsburg,S.L., Calendar,R. and Christie,G.E.
  TITLE     Nucleotide sequence of the genes encoding the major tail sheath and
            tail tube proteins of bacteriophage P2
  JOURNAL   Virology 181 (1), 353-358 (1991)
   PUBMED   1825255
REFERENCE   4  (residues 1 to 145)
  AUTHORS   Arisaka,F., Ishimoto,L., Kassavetis,G., Kumazaki,T. and Ishii,S.
  TITLE     Nucleotide sequence of the tail tube structural gene of
            bacteriophage T4
  JOURNAL   J Virol 62 (3), 882-886 (1988)
   PUBMED   2963141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037565.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17482.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>145
                     /product="phage tail sheath C-terminal domain-containing
                     protein"
     Region          <1..145
                     /region_name="gpL"
                     /note="Mu-like prophage tail sheath protein gpL [Mobilome:
                     prophages, transposons]; COG4386"
                     /db_xref="CDD:443512"
ORIGIN      
        1 parptqtgel vgmlpapkgk rftmteqqtl lshgvatayv esgvlriqrd vttyrknayg
       61 vadnsyldse tlhtsayvlr klksvitsky grhklasdgt rfgpgqaivt pavikgella
      121 tyrqleragi venyelfkqy lvver
//
LOCUS       WP_258121180             275 aa            linear   BCT 02-MAR-2025
DEFINITION  saccharopine dehydrogenase NADP-binding domain-containing protein
            [Mesorhizobium onobrychidis].
ACCESSION   WP_258121180
VERSION     WP_258121180.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 275)
  AUTHORS   Azevedo,R.A. and Lea,P.J.
  TITLE     Lysine metabolism in higher plants
  JOURNAL   Amino Acids 20 (3), 261-279 (2001)
   PUBMED   11354603
REFERENCE   2  (residues 1 to 275)
  AUTHORS   Johansson,E., Steffens,J.J., Lindqvist,Y. and Schneider,G.
  TITLE     Crystal structure of saccharopine reductase from Magnaporthe
            grisea, an enzyme of the alpha-aminoadipate pathway of lysine
            biosynthesis
  JOURNAL   Structure 8 (10), 1037-1047 (2000)
   PUBMED   11080625
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015400.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03435.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..275
                     /product="saccharopine dehydrogenase NADP-binding
                     domain-containing protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=29401
     Region          28..>248
                     /region_name="Lys9"
                     /note="Saccharopine dehydrogenase, NADP-dependent [Amino
                     acid transport and metabolism]; COG1748"
                     /db_xref="CDD:441354"
ORIGIN      
        1 mkilivggyg sfggrivell eneprltliv agrslaraha ycksrdrava rivpalfdrd
       61 gdlpallawl rpdilidasg pfqaygegry rlieacidqr vnyldladgs dfvagvfafd
      121 gaaraaglfv lsgvssfpvl taaavrrlsa dmarvdsirg giapspfagv genviraisg
      181 yagqpvklvr ngrsalghpf teqtrytiap pgrlplsntl fslvdvpdlr alselwpeak
      241 tiwmgagpvp evlhraligl awlvrartvr arfga
//
LOCUS       WP_258121232             904 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter transmembrane domain-containing protein
            [Mesorhizobium onobrychidis].
ACCESSION   WP_258121232
VERSION     WP_258121232.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012869.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00664.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..904
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=100799
     Region          100..>471
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
     Region          <750..904
                     /region_name="SunT"
                     /note="ABC-type bacteriocin/lantibiotic exporters, contain
                     an N-terminal double-glycine peptidase domain [Defense
                     mechanisms]; COG2274"
                     /db_xref="CDD:441875"
ORIGIN      
        1 mepsiaryiw thtkkqqlwi lmivvlsmip yfmsfdlpkl ivngpiqgsg feqpgatqpf
       61 mrlhynlpfi gevqffsgfe ldrkatlfal slvflllvvi nglfklyint ykgrlgerml
      121 rrirfdlidr vlrfppfyfk rvksaevatm vkdeveplgg figdafvqpv llggqaltam
      181 lfivvqnfwl gmiaavivai qivliprmrr rlivlgrerq ltaralsgrv geivdgigav
      241 hvhdtsnyer adiaarlgli fkirfdlyqw kfmvkflnnf laqvtpflfy miggylviqg
      301 rldvgqlvav igaykdlpgp mkelidwdqa rqdiqvkyqq vveqftaegl iaprigalti
      361 ddpdpmtnpl saislsiadd ggamlldris lqvkpgetva lvstatggae alaeafarln
      421 wpgsgrvasg addllelpes vtgrrmsyas sdvflfqasl rdnllyglkh apltsvpydg
      481 aaadqhrwni hearrsgnpd fdihsdwiny asagatgphd lfeavrrvld avvlsrdild
      541 lglrstadlt rhtelarriv elraalrtrl eheglsglva pfepgaynke atigqnllfg
      601 aaagpeladr alaanpyfas vlrqagldht lyemgmeiae qaielfadlp pdhpffqqla
      661 fmsaeeipty ktllqrlknr pheavsendr amivtlsfay ieprhrfgll sdelmskiva
      721 arnrfyenlp pelqnaiery dpakyiaaat vmdnvlfgrv gnnhpdapdr irsivydild
      781 elglyaelld vgldfnvgsg grrltggqrq kldvarallk rpdflilnrp lsaidqrmqd
      841 kvlrnvleea rrddhspaiv wvvtnpamgm ifdrvivfds gklvedgtpe tllagngifk
      901 ells
//
LOCUS       WP_258121353             336 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Mesorhizobium onobrychidis].
ACCESSION   WP_258121353
VERSION     WP_258121353.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024118.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12706.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..336
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=37170
     Region          78..263
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(133,135,137..138,208..209,229,263)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 maarkraanr yysgppsdhf dgtlffnpng klparfsdll kwqlggersk wpaanpspfh
       61 qatpakridg sglrltmigh sslliqtagl niltdpvwsr rvsplsfagp krvnppgiaf
      121 snlppidlvl vshnhydhld latlkrlktr hdplvltplg ndaiiddgvs gmrlsvhdwg
      181 ervdigkdva vhvepvhhws argtrdrrma lwagfvvetp ggkvyfpgdt gfhdginyrl
      241 maerhagfrl ailpigayep rwfmaphhqn peeavqgmll cnaayaagch wgtfrltnep
      301 ideparklge alddqgipqe rfralrpgev wdvpav
//
LOCUS       WP_258121414             234 aa            linear   BCT 02-MAR-2025
DEFINITION  ROK family protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258121414
VERSION     WP_258121414.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..234
                     /product="ROK family protein"
                     /calculated_mol_wt=25110
     Region          16..227
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 makaarkpap dsekivlaid iggshvkilt saggeerrtd sgpgltpqqm iaavqtladg
       61 lpydvismgy pgpvhhnrpl tdpanlgkgw vgcdfatqfg kpvkivndal mqavgsyegg
      121 rmlflglgtg lgaamivdnv aqpmelahlp ykkggsfedy igerglekrg kkkwrkhvfd
      181 vverlraamq pdyvvigggn vdeldelpag crrgdntraf eggfrlwrdk sliv
//
LOCUS       WP_258121453             314 aa            linear   BCT 02-MAR-2025
DEFINITION  LLM class flavin-dependent oxidoreductase [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258121453
VERSION     WP_258121453.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012517.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00296.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..314
                     /product="LLM class flavin-dependent oxidoreductase"
                     /GO_function="GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /calculated_mol_wt=33805
     Region          <57..232
                     /region_name="Flavin_utilizing_monoxygenases"
                     /note="Flavin-utilizing monoxygenases; cl19096"
                     /db_xref="CDD:450250"
ORIGIN      
        1 mpiefthvpg kthpadstvp ffydfaetat klsliedigf qkivvddpag lltnmdiaar
       61 aldrtsslev vlthwagvie ptvaarqlaa ldaksggrls lrmlseplsd ddaearpvgh
      121 tlvwqridey lvllkrlwsn drpfdhegaf ysvrggyvpr kgpqgagmti rmggqsgtal
      181 rvagrhadvf elapgsrgei rqlmervrsa aaehgragkl rfalpvrirs ednascqkav
      241 diagppaqia lsllpyaalg iqefmivgvd rpreiaaagr etiallrnsl tcreadvpqp
      301 gafashvtge vrag
//
LOCUS       WP_258121461             263 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258121461
VERSION     WP_258121461.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 263)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 263)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 263)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 263)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..263
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=28683
     Region          4..262
                     /region_name="PRK10575"
                     /note="Fe3+-hydroxamate ABC transporter ATP-binding
                     protein FhuC"
                     /db_xref="CDD:182561"
ORIGIN      
        1 magihaqtaf hveavrfavg ertllgpvtf elqrsrvygl ighngsgkst likllarqqp
       61 assggitfaq rplvqwgare laralaylpq ttpaatgltv relatlgryp whgalgrfgh
      121 adrrhvdeal vltdmadftd rlvdelsgge rqrawlamlv aqnagvmlld episaldiah
      181 qvevlglvrd lsrrrdlcvv vvlhdpnmaa rycdelialk dgrlltrgtp dqimqgdvlr
      241 rifgvemgvf ahpvtgqpig yvq
//
LOCUS       WP_258121468             477 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-binding domain-containing protein [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258121468
VERSION     WP_258121468.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025114.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13738.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..477
                     /product="NAD(P)-binding domain-containing protein"
                     /calculated_mol_wt=49864
     Region          6..369
                     /region_name="CzcO"
                     /note="Predicted flavoprotein CzcO associated with the
                     cation diffusion facilitator CzcD [Inorganic ion transport
                     and metabolism]; COG2072"
                     /db_xref="CDD:441675"
ORIGIN      
        1 mvsendlpvv iigggpvgla aaaqlvsrgl pvkvyeagsa vgsnlldwgh vrvftpwryc
       61 vdavarklle shgwqmpkpe afptadeivd qylaplakls elapsietna rivaisrwga
      121 dkvlskaret rpfmllveta kgtrrdsara vidasgtwqt pnplgagglp aegerefgdr
      181 iaygipdvlg rdrhlyagrt tlvvgaghsa anallelael aetepgtsal wvtrstdlvr
      241 iygggdadal pargelgsdv rqlaesgrvr lvtgfatvai revdgrlvve gqtkdglrtl
      301 epvdriiaat gqrpdlaltr elrldldpwl egvkalgpli dpnehscgdv pphghrelsh
      361 pepdfytvgv ksygraptfl lltgyeqvrs vaaaiagdma aadavqlvlp etgvctvpvs
      421 lsgassqgcc ggpapaavda ccvddakaka sgksgcgcgs tqaiaavrsd dleiaaq
//
LOCUS       WP_258121472             176 aa            linear   BCT 02-MAR-2025
DEFINITION  flavodoxin domain-containing protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258121472
VERSION     WP_258121472.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 176)
  AUTHORS   Houwman,J.A. and van Mierlo,C.P.M.
  TITLE     Folding of proteins with a flavodoxin-like architecture
  JOURNAL   FEBS J 284 (19), 3145-3167 (2017)
   PUBMED   28380286
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024135.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12724.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..176
                     /product="flavodoxin domain-containing protein"
                     /calculated_mol_wt=19638
     Region          1..173
                     /region_name="HemG"
                     /note="Protoporphyrinogen IX oxidase,
                     menaquinone-dependent (flavodoxin domain) [Coenzyme
                     transport and metabolism]; COG4635"
                     /db_xref="CDD:443673"
ORIGIN      
        1 mnvlivygtt egqtrkiaaw tathirergh qvelqdsaal asdlklgpfd afviaasvhq
       61 ehhqeivtnf vfahhellnt kpsalisvsl saaledqkte aqnyvdrfvs vtgwqprmtl
      121 llggalrftk ydyfqeqfvk fvvmkgsgdp sperdheftd wnaladfadr fletag
//
LOCUS       WP_258121565             115 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6867 family protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258121565
VERSION     WP_258121565.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF045145.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21741.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..115
                     /product="DUF6867 family protein"
                     /calculated_mol_wt=13254
ORIGIN      
        1 mqgilyeeps vwhfffvtcl lggwaawmtg kacaqtwrsf vqlfaymlgl giavrfihha
       61 lfggtmfslq yyivdtivlm ivgfigyqyt rtnqmvtqyn wlyeraslls wkpkg
//
LOCUS       WP_258121583             277 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)H-binding protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258121583
VERSION     WP_258121583.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13460.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..277
                     /product="NAD(P)H-binding protein"
                     /calculated_mol_wt=29224
     Region          10..262
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(13,15..16,18,37..39,65..67,97..99,124..127)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
ORIGIN      
        1 msdtigkptl ilggtgkigr rlaerltarg lpvrigsrsg tpsfdwedna twgpamqgvg
       61 avyisyypdl svpgaaeavg afanlavqng itrlvllsgr geteaqraee mlkasgadwt
      121 ilrcawfsqn fsesffldpl lagevalpvg nvgepfvdad diadaavtal tqqghvgqly
      181 eltgprllsf adaiaeigka agrnigfkqi shaefaaaia ahelpaefaw llnelftevl
      241 dgrnealadg vervlgrapr dfsayateta atgiwsd
//
LOCUS       WP_258121685             205 aa            linear   BCT 02-MAR-2025
DEFINITION  LysE family transporter [Mesorhizobium onobrychidis].
ACCESSION   WP_258121685
VERSION     WP_258121685.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 205)
  AUTHORS   Aleshin,V.V., Zakataeva,N.P. and Livshits,V.A.
  TITLE     A new family of amino-acid-efflux proteins
  JOURNAL   Trends Biochem Sci 24 (4), 133-135 (1999)
   PUBMED   10322417
REFERENCE   2  (residues 1 to 205)
  AUTHORS   Vrljic,M., Sahm,H. and Eggeling,L.
  TITLE     A new type of transporter with a new type of cellular function:
            L-lysine export from Corynebacterium glutamicum
  JOURNAL   Mol Microbiol 22 (5), 815-826 (1996)
   PUBMED   8971704
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013933.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01810.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..205
                     /product="LysE family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /calculated_mol_wt=20771
     Region          25..199
                     /region_name="LysE"
                     /note="LysE type translocator; cl00565"
                     /db_xref="CDD:444980"
ORIGIN      
        1 mletghavaa glfpfaisya lvamlpganf avvaqaglta sratalsaaa gialgassla
       61 avvatgagal rpggiahqma aslygamlvf igwnsmrral siktgvnepk pvpivryfrp
      121 gfvtavanpa talffasstl nlnargathl svvalvfaia iawfgllgls isqpatrrfy
      181 srfrkhadiv lggalvalgf aalgy
//
LOCUS       WP_258121702             135 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258121702
VERSION     WP_258121702.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 135)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 135)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..135
                     /product="VOC family protein"
                     /calculated_mol_wt=14774
     Region          12..132
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mtgfaenrrv atvalvvrnd deaiswyvdr lgflltedvd lgggkrwvtv apangqgarl
       61 llaeaaddmq assignqtgg rvflfletdd fvrdhaamle kgvefreapr heayatvavf
      121 adlhgnlwdl iepkr
//
LOCUS       WP_258121898             316 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD(P)-dependent oxidoreductase [Mesorhizobium onobrychidis].
ACCESSION   WP_258121898
VERSION     WP_258121898.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 316)
  AUTHORS   Dengler,U., Niefind,K., Kiess,M. and Schomburg,D.
  TITLE     Crystal structure of a ternary complex of D-2-hydroxyisocaproate
            dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate
            at 1.9 A resolution
  JOURNAL   J Mol Biol 267 (3), 640-660 (1997)
   PUBMED   9126843
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02826.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..316
                     /product="NAD(P)-dependent oxidoreductase"
                     /GO_function="GO:0051287 - NAD binding [Evidence IEA]"
                     /calculated_mol_wt=34593
     Region          19..311
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(148..150,152,170..172,202..203,230)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:240631"
ORIGIN      
        1 msgqpitvlm vneypdyida kvwaaelknr vpqlefrlwp dvgnkgdidi vlidkgaspg
       61 ffdamtglra vvylgagvdg idlqsfpksv slirlatreq asevvqyivl rvlcqqrhva
      121 eymsqqarki wspiaprkvs etrivvlgag riggwaaklf adlgydtavw srhqktlpgi
      181 qsyfgraqla daltlrdyvi cslpltgdtr gilnssafgk mkrgaylvnv argahvnead
      241 liraldedql sgacldvfqr epleassplw nhpkvtitph vasfwvdsgi dqaadlcgqv
      301 argeplsnki dlelgy
//
LOCUS       WP_258122043             488 aa            linear   BCT 02-MAR-2025
DEFINITION  ROK family protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258122043
VERSION     WP_258122043.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..488
                     /product="ROK family protein"
                     /calculated_mol_wt=50904
     Region          2..288
                     /region_name="NagC"
                     /note="Sugar kinase of the NBD/HSP70 family, may contain
                     an N-terminal HTH domain [Carbohydrate transport and
                     metabolism, Transcription]; COG1940"
                     /db_xref="CDD:441543"
     Region          314..470
                     /region_name="COG0645"
                     /note="Predicted kinase, contains AAA domain [General
                     function prediction only]"
                     /db_xref="CDD:440410"
ORIGIN      
        1 mplssmaigi diggtnlraa risgtgeild riseksapdp elvlsriaem vrrldspeva
       61 aigigvpgrv darlgavlsg gyvnlatisl aqrleslagk pvvidndcnm alvaemalgs
      121 arghesivmf tigtgiggav vqdrrivrgk gtagqlghit vdisgeacvc grrgcvetts
      181 sgtalgrhia raglgpdvsv dqlfardagg dplargilea wagplraaid ttvamfdpdl
      241 vllggglgla ahralarapa lapwyqcpve aaqlgddagv igaglqalat kaavapvslp
      301 sarldravps rravlvngip asgkstvsrg iaermgwpll aldtiknpfl evlgggdref
      361 nrtlgrasyq aiwsvvgeap agsifvvdaw fgfqprqmle dhlrragveq taeiwchaps
      421 gvlaeryrar ldqrpaghpg aayipeliel anraeplrrg plfdvdttkp iafdaitqwl
      481 qatiaadr
//
LOCUS       WP_258122048             251 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ATP-binding cassette domain-containing protein
            [Mesorhizobium].
ACCESSION   WP_258122048
VERSION     WP_258122048.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium
  ORGANISM  Mesorhizobium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae.
REFERENCE   1  (residues 1 to 251)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 251)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 251)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 251)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Mesorhizobium"
                     /db_xref="taxon:68287"
     Protein         1..251
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=26998
     Region          7..>250
                     /region_name="MglA"
                     /note="ABC-type sugar transport system, ATPase component
                     [Carbohydrate transport and metabolism]; COG1129"
                     /db_xref="CDD:440745"
ORIGIN      
        1 mnssepttpl levrhlskhf gavqalndfs mavrpgevva lagdngagkt tlikaisgvf
       61 qptggeillr gqpvtfatpq earekgieti yqdlaladnl siganiflgr epmrkafgfl
      121 pvldrkamav aakqtmgrld fhvsrldapv snfsggqrqa vaigravywd aqilimdept
      181 aalgvpeqrk vislihqlka qgrgvifish nlqdifavsd rivvlrrgvq agerkisetn
      241 hdevvklmvg g
//
LOCUS       WP_258122061             498 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-linked oxidase C-terminal domain-containing protein
            [Mesorhizobium onobrychidis].
ACCESSION   WP_258122061
VERSION     WP_258122061.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 498)
  AUTHORS   Mattevi,A., Fraaije,M.W., Coda,A. and van Berkel,W.J.
  TITLE     Crystallization and preliminary X-ray analysis of the flavoenzyme
            vanillyl-alcohol oxidase from Penicillium simplicissimum
  JOURNAL   Proteins 27 (4), 601-603 (1997)
   PUBMED   9141139
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02913.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..498
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=53660
     Region          17..498
                     /region_name="PRK11230"
                     /note="glycolate oxidase subunit GlcD; Provisional"
                     /db_xref="CDD:183043"
ORIGIN      
        1 msgllmpkpd datmrrrdei vadmriivpg egvvdaansm rafesdglta yrqlplvvvl
       61 petvaqvsrv lkycndrnir vvprgsgtsl sggalpleda vllvmsrfnr ileidfpnri
      121 vvaqpgvtnl gittaveqeg fyyapdpssq iacsiggnva ensggvhclk ygltannvlg
      181 iemvlmngev vrlggkhlda egydllgvmt gsegllgvvt evtvrilkkp etaralligf
      241 ptseqggqcv adiigagiip ggmemmdrpa ihaaedfvha gypldveall iveldgpgve
      301 vdhliglvea iahksgsttc rvsqseqerl tfwagrkaaf pavgrispdy ycmdgtiprk
      361 elprvlhgmr elsekyglgv anvfhagdgn lhplilydan vpgeldkaes fgadilrlcv
      421 kvggvltgeh gvgvekrdlm pemfnqidld qqmrvkcafd pnhllnpgkv fpqlrrcael
      481 grmhvhrgqt afpdiprf
//
LOCUS       WP_258122062             418 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-binding protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258122062
VERSION     WP_258122062.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 418)
  AUTHORS   Mattevi,A., Fraaije,M.W., Mozzarelli,A., Olivi,L., Coda,A. and van
            Berkel,W.J.
  TITLE     Crystal structures and inhibitor binding in the octameric
            flavoenzyme vanillyl-alcohol oxidase: the shape of the active-site
            cavity controls substrate specificity
  JOURNAL   Structure 5 (7), 907-920 (1997)
   PUBMED   9261083
REFERENCE   2  (residues 1 to 418)
  AUTHORS   Benson,T.E., Walsh,C.T. and Hogle,J.M.
  TITLE     The structure of the substrate-free form of MurB, an essential
            enzyme for the synthesis of bacterial cell walls
  JOURNAL   Structure 4 (1), 47-54 (1996)
   PUBMED   8805513
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013714.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01565.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..418
                     /product="FAD-binding protein"
                     /GO_function="GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /calculated_mol_wt=43216
     Region          10..402
                     /region_name="glcE"
                     /note="glycolate oxidase FAD binding subunit; Provisional;
                     PRK11282"
                     /db_xref="CDD:236893"
ORIGIN      
        1 mttftpstaa etlstvawaa aedspleilg hgskrgigrp lqtehtldls klsgvtlyep
       61 aelvlsakag tpladiesll aengqqltfe pldygpllgg elgrgtiggv laanlcgprr
      121 lkagaardhi lgvaavsgrg eafksggrvv knvtgydlsk lmanswgtla iltdvtfkvl
      181 psaetevtla lrgllddhaa aamalalgss aevssaahlp ervaarvagg slgnaaatll
      241 rvegfgpsva yriaalkdll gnagpleeis gdvshsvwrd irdcapfadg lekpvwrvsm
      301 apaqghqmvl alrmqaaada fydwqggliw lrmehgdpea dllrglvrqy ggghatlvra
      361 apshraavpv fepqapqlaa lsarlkaefd pknilnpgrm apaassatlg tategaas
//
LOCUS       WP_258122084             222 aa            linear   BCT 02-MAR-2025
DEFINITION  aquaporin [Mesorhizobium onobrychidis].
ACCESSION   WP_258122084
VERSION     WP_258122084.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 222)
  AUTHORS   Froger,A., Tallur,B., Thomas,D. and Delamarche,C.
  TITLE     Prediction of functional residues in water channels and related
            proteins
  JOURNAL   Protein Sci 7 (6), 1458-1468 (1998)
   PUBMED   9655351
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012455.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00230.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..222
                     /product="aquaporin"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015267 - channel activity [Evidence
                     IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=22235
     Region          1..215
                     /region_name="MIP"
                     /note="Major intrinsic protein (MIP) superfamily. Members
                     of the MIP superfamily function as membrane channels that
                     selectively transport water, small neutral molecules, and
                     ions out of and between cells. The channel proteins share
                     a common fold: the N-terminal...; cl00200"
                     /db_xref="CDD:444743"
     Site            order(42,60..62,173..174,177,180)
                     /site_type="active"
                     /note="amphipathic channel [active]"
                     /db_xref="CDD:238204"
     Site            order(62..64,177..179)
                     /site_type="other"
                     /note="Asn-Pro-Ala signature motifs"
                     /db_xref="CDD:238204"
ORIGIN      
        1 mktylaevlg tfllvfigta svvtggfgga lplgqegigl afgigliaaa yaigpisgah
       61 lnpavtlgvf lagrmqakdv ipywiaqiig aiiaslalwi ivsgqvgght ggfgangwdt
      121 tkwgvssall weligtftvi lgvtsgshat afaglviglt laglhfaiip vtgtslnpar
      181 sigpalfsgs aaigqlwlfi vapliggaia gvvaktrife kd
//
LOCUS       WP_258122112             438 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258122112
VERSION     WP_258122112.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 438)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 438)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 438)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 438)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..438
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=49295
     Region          1..353
                     /region_name="UgpB"
                     /note="ABC-type glycerol-3-phosphate transport system,
                     periplasmic component [Carbohydrate transport and
                     metabolism]; COG1653"
                     /db_xref="CDD:441259"
     Region          <321..405
                     /region_name="AfuA"
                     /note="ABC-type Fe3+ transport system, periplasmic
                     component [Inorganic ion transport and metabolism];
                     COG1840"
                     /db_xref="CDD:441445"
ORIGIN      
        1 mrktmtsmla giglvlacgt svyaqdkelt ifwaewdpan ylqelvnlye aesgvkvtve
       61 ttpwgdfqtk aftefnakgs aydmvvgdsq wigaaseagh yvdltdffnk hnlkevmapa
      121 tvkyyaeyps nsgkywsipa egdavgwsyr kdwfedpkem eafkakygyd lgvpkdwkql
      181 rdiaeffhrp dekrygvaiy tdnsydalvm gvenaifsfg gelgdyatyk vdgivnseqn
      241 vkaleaykel ysftppgwak sffiednqai tenlaamsmn yfaffpalin easnpnakvt
      301 gffanppgps gdqfaalggq gisvvsysqn qeeamkflew fikdetqkkw aelggytasa
      361 kvlespefqn atpynkafye tmfkvkdfwa tpeyaelliq mnqrvypyit gnqgtakevl
      421 dslaadwnat fkkynrvk
//
LOCUS       WP_258122132             205 aa            linear   BCT 02-MAR-2025
DEFINITION  DapH/DapD/GlmU-related protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258122132
VERSION     WP_258122132.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025953.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14602.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..205
                     /product="DapH/DapD/GlmU-related protein"
                     /calculated_mol_wt=22787
     Region          1..204
                     /region_name="LbetaH"
                     /note="Left-handed parallel beta-Helix (LbetaH or LbH)
                     domain: The alignment contains 5 turns, each containing
                     three imperfect tandem repeats of a hexapeptide repeat
                     motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing
                     hexapeptide repeats are often enzymes...; cl00160"
                     /db_xref="CDD:469633"
     Site            order(42,44,61,73..74,79,82,84,114,116,119,154,162)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:100040"
     Site            order(44,72..73,75,85..86,116,119,128,150,152..153,155,
                     159)
                     /site_type="active"
                     /db_xref="CDD:100040"
     Site            order(44,72,85..86)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:100040"
     Site            order(73,75,106,116,119,124,128,150,152..153,155,159)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:100040"
ORIGIN      
        1 mtrklsetpl vhetaevens tlgrwteiae rcrvsestlg dysymmqdcg vwcatigkfa
       61 niaasvrina tnhptwrptl hhftyrasdy wddaehesef faqrrarrvt ighdswlghg
      121 stilpgvtvg dgaavgagav vskdvapyai vggvpakpir erfdrrtaer yqalawwdwd
      181 harlraaldd frglsaeafl ekhgg
//
LOCUS       WP_258122178             259 aa            linear   BCT 02-MAR-2025
DEFINITION  cupin domain-containing protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258122178
VERSION     WP_258122178.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 259)
  AUTHORS   Dunwell,J.M.
  TITLE     Cupins: a new superfamily of functionally diverse proteins that
            include germins and plant storage proteins
  JOURNAL   Biotechnol Genet Eng Rev 15, 1-32 (1998)
   PUBMED   9573603
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019498.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07883.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..259
                     /product="cupin domain-containing protein"
                     /calculated_mol_wt=28716
     Region          114..230
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
ORIGIN      
        1 mntnvvevte falkpgfteq mflqtrdevn devrklkgfi nrrllksegg wtemfewadm
       61 dsgkaagevw stlpgiknyc smvnsasikv gyhsvaavag geagrripha fcshalegea
      121 rwwlgslavi katatqtagq ftlvevlene geaplhvhhr edesfqvmeg eiefeiggsk
      181 imarpgsflf aprdvphrym vkhgparmlf lftpagfeel vratsvpadd wripparvgm
      241 pdmetfpdvv rrygcellg
//
LOCUS       WP_258122293             518 aa            linear   BCT 02-MAR-2025
DEFINITION  amino acid permease [Mesorhizobium onobrychidis].
ACCESSION   WP_258122293
VERSION     WP_258122293.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13520.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..518
                     /product="amino acid permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=55608
     Region          18..493
                     /region_name="AA_permease_2"
                     /note="Amino acid permease; cl45918"
                     /db_xref="CDD:459263"
ORIGIN      
        1 maapgytevd ksedmkvlhs mgyaqelerr lsrfsnfavs fsiicilsgg inslaqatsg
       61 aggigigigw lvgcfvsltf avamsqissa yptagglyhw gsilgnrgtg wvtawlnllg
      121 litvlgainv gtwtfflgaf gpalgiegtl tnqmifliii tgaqalinhl gikltakltd
      181 fsgyliffga ilialvclis aetwdfsrlf tfknysgdag ngvwpavsnw wvfalglllp
      241 iytitgydas ahtseetika assvpramvm svvwsaifgy lflaafilmi pnmddaakqg
      301 wnvffwafdq rvspgikelv ylvvfvaqll cglatvtsas rmifafsrdg glpasgalsk
      361 vsptyrtpva aiwtasilsv lfvwgstlvs vagtsaytiv vsctviflfl sftvpivlgm
      421 lawgtpkwdk mgpwnmgkgm fmlfavlsil smilifvigi qppnnwalyi tvgffiltai
      481 vwfvfernrf qgpplgdiia arqaaikaae qavgetgh
//
LOCUS       WP_258122307             504 aa            linear   BCT 02-MAR-2025
DEFINITION  GMC oxidoreductase [Mesorhizobium onobrychidis].
ACCESSION   WP_258122307
VERSION     WP_258122307.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017050.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05199.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..504
                     /product="GMC oxidoreductase"
                     /GO_function="GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /calculated_mol_wt=54743
     Region          20..499
                     /region_name="BetA"
                     /note="Choline dehydrogenase or related flavoprotein
                     [Lipid transport and metabolism, General function
                     prediction only]; COG2303"
                     /db_xref="CDD:441878"
ORIGIN      
        1 mtnpdiviig sgiggatias glagsgasil mlergeplpa tphtrdtrai fvdghyrpke
       61 mwleaggaaf npgnyyyvgg nskfygavli ryrrqdfsam ehyggvspaw pfsydefepw
      121 yskaeqlfrv rgalgedpte pfhsipyafg pvpdeppiar araelkglgl hpaslplgvd
      181 idawlkdgkt gwdafpntgt gkvdaqsgpl taaltdrnir letgahveyl eassdartia
      241 avhyrqngtl kkvtpklvil sagavnsavi llrspspnsn gggnglanrs dqvgrnfmnh
      301 nssamlaidp rrrntsvyqk tlmlndyyls dgkggkplgn vqllgkidgn ilranvklap
      361 kfaldfmagh avdwylmced lpdpesrfmv dgkdivmqwr rsnmqslegl tkvmrenfra
      421 cgypivlsrp fdkrtpshqc gtvkmgddpa tspldpfcrs fdhhnlfvvd gsflpnsaav
      481 npalsiaaqa lrvadhirkt elva
//
LOCUS       WP_258122311             503 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258122311
VERSION     WP_258122311.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 503)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..503
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=52843
     Region          39..492
                     /region_name="ALDH_SNDH"
                     /note="Gluconobacter oxydans L-sorbosone
                     dehydrogenase-like; cd07118"
                     /db_xref="CDD:143436"
     Site            order(164..168,176,191,193..194,242..245,248,251..252,
                     266..268,300,398,400,426,464)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143436"
     Site            order(168,266,297,300)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143436"
ORIGIN      
        1 mnlpltiamp aeaaatpksy rllidgkfvd ardgrtlern spghgftvsr yaqageadve
       61 aavtaahkaf vtgpwphmka geraaillka adlietrlee iarldvlesg kpiaqargei
      121 ggavdiwrya aalartlhge tyanlgdaml gvvlrepigv vsiitpwnfp flivsqklpf
      181 alaagctavv kpsemtsast fvlgdilmqa glpdgvvnil aglgadvgaa mvshplvemv
      241 sftgstrvgk vtmasaanwl kkvsmelggk ngqivfpdad feaaadaavf ggffnagecc
      301 nagsrlivhe aiaddflgav kaltarvtvg dplddstkvg amissehlak vtgyvaaaan
      361 dgssvysggk qiassagqyl dptilrgvte dmaiareevf gpvlsvltfg sieealrian
      421 ntpyglsagv wsasidtcms varsvrsgtv wvntfmegyp elpfggykqs glgrelgrra
      481 vedyteekti qfhrgqrtgw wvg
//
LOCUS       WP_258122337             155 aa            linear   BCT 02-MAR-2025
DEFINITION  Hsp20 family protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258122337
VERSION     WP_258122337.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 155)
  AUTHORS   Maaroufi,H. and Tanguay,R.M.
  TITLE     Analysis and phylogeny of small heat shock proteins from marine
            viruses and their cyanobacteria host
  JOURNAL   PLoS One 8 (11), e81207 (2013)
   PUBMED   24265841
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 155)
  AUTHORS   Kim,K.K., Kim,R. and Kim,S.H.
  TITLE     Crystal structure of a small heat-shock protein
  JOURNAL   Nature 394 (6693), 595-599 (1998)
   PUBMED   9707123
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012241.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00011.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..155
                     /product="Hsp20 family protein"
                     /calculated_mol_wt=17085
     Region          1..139
                     /region_name="alpha-crystallin domain (ACD) found in
                     alpha-crystallin-type small heat shock proteins, and a
                     similar domain found in p23 (a cochaperone for Hsp90) and
                     in other p23-like proteins."
                     /note="The alpha-crystallin-Hsps_p23-like superfamily
                     includes the alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small heat shock proteins (sHsps)
                     and a similar domain found in p23-like proteins. sHsps are
                     small stress induced proteins with monomeric...; cl00175"
                     /db_xref="CDD:469641"
     Site            order(38..42,51,53,55..56,100,118..119)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:107227"
ORIGIN      
        1 mrhvdfsply rstvgfdrlf tmldslaqpe gaqtyppyni ertgedsyri smavagfsdd
       61 elsieahrnv ltvkgerkeg gngegselly rgiasrafer rfqladhvev vgaslkngll
      121 fvdlkrnipe elkprkiait assakakqie aknaa
//
LOCUS       WP_258122398             187 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4329 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_258122398
VERSION     WP_258122398.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025581.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14220.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..187
                     /product="DUF4329 domain-containing protein"
     Region          <1..40
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
     Region          55..173
                     /region_name="DUF4329"
                     /note="Domain of unknown function (DUF4329); pfam14220"
                     /db_xref="CDD:433783"
ORIGIN      
        1 ryydplqgry itqdpiglkg gwnlytypls pvnsmdplgl yefksknidd igifalamcn
       61 gesinenkey gglickkqge yfpmnpissn dndsvdlrni kcpegservg dyhthgfysd
      121 dkgnkvtken dvydslnfss kdltnsymng mekkeyssyl gtpnntylky npkakgngvt
      181 iirqgsn
//
LOCUS       WP_258122454             201 aa            linear   BCT 02-MAR-2025
DEFINITION  Arc family DNA-binding protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258122454
VERSION     WP_258122454.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 201)
  AUTHORS   Raumann,B.E., Rould,M.A., Pabo,C.O. and Sauer,R.T.
  TITLE     DNA recognition by beta-sheets in the Arc repressor-operator
            crystal structure
  JOURNAL   Nature 367 (6465), 754-757 (1994)
   PUBMED   8107872
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015807.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03869.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..201
                     /product="Arc family DNA-binding protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /calculated_mol_wt=23520
     Region          13..57
                     /region_name="Arc"
                     /note="Arc-like DNA binding domain; cl46767"
                     /db_xref="CDD:481107"
ORIGIN      
        1 mdddeqkyps qlaerfqvrl paglrdrika yaerhgrsmn teivrvleqe fpeqwpidtr
       61 lndlaemmai lragtsdpri defvskfeet vegivsgrvt gvdletresi mgmwqayrsr
      121 edeknyeaaq dampeyddee rrsleltgrs ekfalppprr kewsemseee qdrhikerlk
      181 leretgeqsn ssdlplpewk p
//
LOCUS       WP_258122460              93 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6074 family protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258122460
VERSION     WP_258122460.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 93)
  AUTHORS   Xu,L., Cheng,R., Li,J., Wang,Y., Zhu,B., Ma,S., Zhang,W., Dong,W.,
            Wang,S. and Zhang,J.
  TITLE     Identification of substituent groups and related genes involved in
            salecan biosynthesis in Agrobacterium sp. ZX09
  JOURNAL   Appl Microbiol Biotechnol 101 (2), 585-598 (2017)
   PUBMED   27678113
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039341.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19551.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..93
                     /product="DUF6074 family protein"
                     /calculated_mol_wt=10245
     Region          8..89
                     /region_name="DUF6074"
                     /note="Family of unknown function (DUF6074); pfam19551"
                     /db_xref="CDD:437383"
ORIGIN      
        1 mniepaacnv ivfplvrrvg kvrdvarkml dkstdrhads yrdqvttall ghmtrvgipd
       61 qeqdeqlgaf wsavdaemtr qtyrgsrpgd saa
//
LOCUS       WP_258122471             285 aa            linear   BCT 02-MAR-2025
DEFINITION  reverse transcriptase domain-containing protein [Escherichia coli].
ACCESSION   WP_258122471
VERSION     WP_258122471.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 285)
  AUTHORS   Xiong,Y. and Eickbush,T.H.
  TITLE     Origin and evolution of retroelements based upon their reverse
            transcriptase sequences
  JOURNAL   EMBO J 9 (10), 3353-3362 (1990)
   PUBMED   1698615
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012307.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00078.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..285
                     /product="reverse transcriptase domain-containing protein"
                     /calculated_mol_wt=33516
     Region          <49..>269
                     /region_name="YkfC"
                     /note="Retron-type reverse transcriptase [Mobilome:
                     prophages, transposons]; COG3344"
                     /db_xref="CDD:442573"
ORIGIN      
        1 mdnceyrllp pqlirtgkqd divlwsaada mvmkwvtlei kdllplqsrc vhtaghhggr
       61 dslteitqml aqgarfvwrt dirgyyrhir keqlwhhicr fvrssvlqni ikqyiwytve
      121 hggvfftpqg gicrgsalrp llgasflwyv dsafsrqedi yyvrymddfl flstrrwplr
      181 ravrrlhdyf edtgfechpd ktqvgrterg fywlgvwfda tgptgiapra kenhrarrlr
      241 leeqarrkgl sevavqhrvq qyearwllwa erqmtaalpd gfnlt
//
LOCUS       WP_258122484             274 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase domain-containing protein [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258122484
VERSION     WP_258122484.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019846.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08241.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..274
                     /product="methyltransferase domain-containing protein"
                     /GO_function="GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /calculated_mol_wt=29154
     Region          28..>142
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(48..54,72..73,97..99,115)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
ORIGIN      
        1 maeqeqwqle gsaaelyery lvpaitalwa adlvdraapl sgervldvac gtgvvarlaa
       61 ermgsgqvvg ldintgmlav arslprgagp lidwhegsal empfpdatfd lvlcqlglqf
      121 fpdrssalre mfrvlvpngr lalsvfraie rtpaakalad aldrhlgpga satkrsehsl
      181 adadelyrlv agagfrqvti dtttqnirfp sskeyvrlql aatpqaglvs gmdaghrdav
      241 iaaimgdvss slaiystgge lmfpqeahvv lark
//
LOCUS       WP_258122500             495 aa            linear   BCT 02-MAR-2025
DEFINITION  ATPase domain-containing protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258122500
VERSION     WP_258122500.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 495)
  AUTHORS   Iwasaki,H., Taniguchi,Y., Ishiura,M. and Kondo,T.
  TITLE     Physical interactions among circadian clock proteins KaiA, KaiB and
            KaiC in cyanobacteria
  JOURNAL   EMBO J 18 (5), 1137-1145 (1999)
   PUBMED   10064581
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018455.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06745.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..495
                     /product="ATPase domain-containing protein"
                     /calculated_mol_wt=53921
     Region          9..233
                     /region_name="KaiC-like_N"
                     /note="N-terminal domain of KaiC family protein;
                     uncharacterized subfamily; cd19488"
                     /db_xref="CDD:410896"
     Site            order(28,36..37,40,64..65,69,72..73,75..76,138,151,
                     154..155,158,161,172,178,180,183..184,193..194,196,
                     202..205,207,209..210,212..213,221)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:410896"
     Site            order(36..42,65,76..77,204,225..226)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410896"
     Region          250..466
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            order(279..281,300,302..303,364..365)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410865"
ORIGIN      
        1 metddaspiv tgvegldhvl rggyakfrsh lvegrpgsgk ttlglqflln gaqnkercly
       61 itlseskrel lsvasrhgls ldgieilelv ppelsldpsq lqtlvhssdl elgetvqsal
      121 aeierlkpdr vvfdslseir llsqgslryr rqvlalksff llsnatvlll ddltaehddl
      181 nlhsishgvi rleqlspvyg gerrrlrvik mrgvqirggy hdfvirpggl tvfprlvase
      241 hemveygppa ssetsidnla ggglergtst llmgpsgvgk stiasaycha allrgesvlv
      301 llfdetkrif marasglgmn leafaeegrl lleqidpael spgelsariq saversnari
      361 vvvdsltgyl ntmsgeqhlv lqmheiltyl nhkgvvtilv lanhgligqv aapvemtylc
      421 dsvmllrffe sggrlrrais vvkrrvgphe dtirefkita aglavgeple dfrgiltgvp
      481 sfegkkadll edeps
//
LOCUS       WP_258122328              95 aa            linear   BCT 02-MAR-2025
DEFINITION  PerC family transcriptional regulator [Escherichia coli].
ACCESSION   WP_258122328
VERSION     WP_258122328.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 95)
  AUTHORS   Gomez-Duarte,O.G. and Kaper,J.B.
  TITLE     A plasmid-encoded regulatory region activates chromosomal eaeA
            expression in enteropathogenic Escherichia coli
  JOURNAL   Infect Immun 63 (5), 1767-1776 (1995)
   PUBMED   7729884
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06069.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..95
                     /product="PerC family transcriptional regulator"
                     /calculated_mol_wt=10575
     Region          1..90
                     /region_name="PerC"
                     /note="PerC transcriptional activator; pfam06069"
                     /db_xref="CDD:310570"
ORIGIN      
        1 mihdskaeal earglyrraa erwaevimla ngdkareqva krraecirra arpparqdnf
       61 gemrgtisra hagmglhqpn skafrkypgs kncsq
//
LOCUS       WP_258122525             100 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4258 domain-containing protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258122525
VERSION     WP_258122525.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14076.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..100
                     /product="DUF4258 domain-containing protein"
                     /calculated_mol_wt=11092
ORIGIN      
        1 maeiipltlt aplalkmikl laadtnnivi vtharkrgrq rrisrrqvel cvqrgsiceg
       61 pvmnakghwq vnmyrhaage emecvvaidw gkslvvitvf
//
LOCUS       WP_258122569             432 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6638 family protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258122569
VERSION     WP_258122569.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042723.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20343.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..432
                     /product="DUF6638 family protein"
                     /calculated_mol_wt=49398
     Region          14..429
                     /region_name="DUF6638"
                     /note="Family of unknown function (DUF6638); pfam20343"
                     /db_xref="CDD:466493"
ORIGIN      
        1 makssdllre neliygrllt idephliqry nkalvafglk ptklksfeid rtgfspqvae
       61 ecgdynyldp neinrrfiil tpsqidlpvv htafsntsql mfefmstnqr aidaltikdv
      121 iygeiedsvp kvddiedlls inqvefkvls aedvlgkaae lgklvdqlkq epdawrdsam
      181 ltrmvelakv cgdirenalv pdqvifrhsa ywtshfggly vfidpdmttv isdpaapgfr
      241 rsrpwqvsyl sindadrvfk flaatgriel praswietsg ylehraemvv ralirdaepd
      301 rnltdvdkvw lqtwihghad litrdgnfpf lnaakreiah lgylkiedvf pqqrflaira
      361 kpghpdawlt nqlisdfvpq dfvsryvfnk pgfyrdydgf sdawrshvvd vlkttylkdk
      421 vafrtrlygl td
//
LOCUS       WP_258116610             482 aa            linear   BCT 02-MAR-2025
DEFINITION  aromatic amino acid lyase [Mesorhizobium onobrychidis].
ACCESSION   WP_258116610
VERSION     WP_258116610.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 482)
  AUTHORS   Rachid,S., Krug,D., Kunze,B., Kochems,I., Scharfe,M.,
            Zabriskie,T.M., Blocker,H. and Muller,R.
  TITLE     Molecular and biochemical studies of chondramide formation-highly
            cytotoxic natural products from Chondromyces crocatus Cm c5
  JOURNAL   Chem Biol 13 (6), 667-681 (2006)
   PUBMED   16793524
REFERENCE   2  (residues 1 to 482)
  AUTHORS   Schwede,T.F., Retey,J. and Schulz,G.E.
  TITLE     Crystal structure of histidine ammonia-lyase revealing a novel
            polypeptide modification as the catalytic electrophile
  JOURNAL   Biochemistry 38 (17), 5355-5361 (1999)
   PUBMED   10220322
REFERENCE   3  (residues 1 to 482)
  AUTHORS   Appert,C., Logemann,E., Hahlbrock,K., Schmid,J. and Amrhein,N.
  TITLE     Structural and catalytic properties of the four phenylalanine
            ammonia-lyase isoenzymes from parsley (Petroselinum crispum Nym.)
  JOURNAL   Eur J Biochem 225 (1), 491-499 (1994)
   PUBMED   7925471
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012447.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00221.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..482
                     /product="aromatic amino acid lyase"
                     /calculated_mol_wt=51422
     Region          11..453
                     /region_name="Lyase_aromatic"
                     /note="Aromatic amino acid lyase; pfam00221"
                     /db_xref="CDD:459718"
ORIGIN      
        1 mtiilttred inlssvfrva wkkdtvqisg kalqriaecr tsflrlietd pvpviygvtt
       61 amgelasrrl elgerdrhar ikafaaatsf geplpdrvvr aivlarlanf legnaattpr
      121 valavaamld ggpmplvpss gqggageila lyplfaelst rfdlevkerg slingspcaa
      181 alvadaalaa rrrirlaekv falsieafra plehydpald alwgdeheaa alrglrefla
      241 gagtgrrnyq apvsyrivpr ilghahrala saeraatvsl asvsdnpvyi ppddghplgr
      301 cistggyhna matpalddla aiwadtcllc drhaskllng kvsllpdlll tgrdwsdsdg
      361 hgnvgyvpma itgyleqakl aaqrtfipgt esagagqddv attiflawtk earagrclda
      421 amamlavias qalhvterva ppalqsfvad vrsivppvgd drvlgpelat ltgwftrqvf
      481 ee
//
LOCUS       WP_258122595             237 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase gpA endonuclease subunit, partial [Escherichia coli].
ACCESSION   WP_258122595
VERSION     WP_258122595.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 237)
  AUTHORS   Ortiz,D., delToro,D., Ordyan,M., Pajak,J., Sippy,J., Catala,A.,
            Oh,C.S., Vu,A., Arya,G., Feiss,M., Smith,D.E. and Catalano,C.E.
  TITLE     Evidence that a catalytic glutamate and an 'Arginine Toggle' act in
            concert to mediate ATP hydrolysis and mechanochemical coupling in a
            viral DNA packaging motor
  JOURNAL   Nucleic Acids Res 47 (3), 1404-1415 (2019)
   PUBMED   30541105
REFERENCE   2  (residues 1 to 237)
  AUTHORS   delToro,D., Ortiz,D., Ordyan,M., Sippy,J., Oh,C.S., Keller,N.,
            Feiss,M., Catalano,C.E. and Smith,D.E.
  TITLE     Walker-A Motif Acts to Coordinate ATP Hydrolysis with Motor Output
            in Viral DNA Packaging
  JOURNAL   J Mol Biol 428 (13), 2709-2729 (2016)
   PUBMED   27139643
REFERENCE   3  (residues 1 to 237)
  AUTHORS   Andrews,B.T. and Catalano,C.E.
  TITLE     The enzymology of a viral genome packaging motor is influenced by
            the assembly state of the motor subunits
  JOURNAL   Biochemistry 51 (46), 9342-9353 (2012)
   PUBMED   23134123
REFERENCE   4  (residues 1 to 237)
  AUTHORS   Ortega,M.E., Gaussier,H. and Catalano,C.E.
  TITLE     The DNA maturation domain of gpA, the DNA packaging motor protein
            of bacteriophage lambda, contains an ATPase site associated with
            endonuclease activity
  JOURNAL   J Mol Biol 373 (4), 851-865 (2007)
   PUBMED   17870092
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042573.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20454.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>237
                     /product="terminase gpA endonuclease subunit"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
     Region          <27..237
                     /region_name="gpA1"
                     /note="Phage terminase, large subunit GpA [Mobilome:
                     prophages, transposons]; COG5525"
                     /db_xref="CDD:444276"
ORIGIN      
        1 ryicektgiw trdgilwfss sgeeieppds vtfhiwtays pfttwvqivk dwmktkgdtg
       61 krktfvnttl getweakige rpdaevmaer kehysapvpd rvayltagid sqldryemrv
      121 wgwgpgeesw lidrqiimgr hddeqtllrv deainktytr rngaemsisr icwdtggidp
      181 tivyerskkh glfrvipikg asvygkpvas mprkrnkngv ylteigtdta keqiynr
//
LOCUS       WP_258122610             313 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258122610
VERSION     WP_258122610.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13407.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..313
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=33124
     Region          21..302
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 mkkllcsaal atmmstaama ekigvsivnf dnnfqtllmh gmqdrakekg vgiqvedaqn
       61 dvakqldqvk nfiangvdai vvtlvdtnas ktlsdeaasa giplvfvnle pndmanlpdk
      121 qvyvgsneae sgtleafevc kllrangksa garayivmgs lvhqaalqrt kdveqifgtd
      181 mcnfikiidk qssewsrdna qnlmtnwlta gpvpdavian ndesaigvil alkangvdmk
      241 nvvvggidat qdglqsmkag dlsvtvfqna kaqggggvda aialakgekv drvvyvpfel
      301 vtpanmndyl nkn
//
LOCUS       WP_258122715             154 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6644 family protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258122715
VERSION     WP_258122715.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042488.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20349.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..154
                     /product="DUF6644 family protein"
                     /calculated_mol_wt=16459
     Region          29..152
                     /region_name="DUF6644"
                     /note="Family of unknown function (DUF6644); pfam20349"
                     /db_xref="CDD:466499"
ORIGIN      
        1 mdellagieq lalvralkas fvaypivnal himsigallt svwlmdlrvl gafrslpyaa
       61 ftallrrtaf aafagalvtg sllfsvrase yaampifltk mtlillagan flvfmrrakg
      121 gdepadgtvt ilavlslmlw tsvlfagrfi gfln
//
LOCUS       WP_258122761            1137 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Mesorhizobium onobrychidis].
ACCESSION   WP_258122761
VERSION     WP_258122761.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13191.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1137
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..1137
                     /product="AAA family ATPase"
                     /calculated_mol_wt=121801
     Region          1..58
                     /region_name="SAM_1"
                     /note="SAM domain (Sterile alpha motif); pfam00536"
                     /db_xref="CDD:425739"
     Region          <90..1074
                     /region_name="TOMM_kin_cyc"
                     /note="TOMM system kinase/cyclase fusion protein;
                     TIGR03903"
                     /db_xref="CDD:274846"
ORIGIN      
        1 mdiaawlasl glgeyapafr dndidfellp klttedltal girsvghrrk llsaisalae
       61 nssaqpgsnl stleefaqda addvaaprae rrqltvmfvd lvgstalsqr ldpedmrevi
      121 lsyqqavsre iaryegrvak lmgdgvlayf gwpqahedda eravraglaa atatgrlagp
      181 grvplaarvg iatglvvvgd lvgegaaqee avvgdtpnla arlqavaepd sivvaeatqr
      241 lvaglftatd lgerelkgft apvrcwrivg etaaesrfea rhavltplvg rqeelaflle
      301 rwhratsgqg qvvlltgeag igksrllaal aaqvaagprs vlrffcsahy tnsalhplis
      361 hleraagfvg dnnadtrfdk ltallaeiga eagealplla tllsidasgr yrppklpapa
      421 lrartlaalt rlveapatna pvlvlvedah widpttaewl etlverlsdl pvllvvtarp
      481 efeprwrals cvdtlqlgrl epsdgtaime rvaggkklpr diadrilant egvplfveel
      541 tktvldsgll veagdcylai gplpaiaips tlqdslmarl drlspvketa qiaacigrvf
      601 qhrllaavsg agrgrlddal sqleqaellf rsgaapeaty tfkhalvcdt ayqsllksrr
      661 qqihakiaaa leaefadvae tepetvaqhy tmaglaaeaa swwlkagqra mtksanreaa
      721 ahfgkglelv vtlpasearl rqelslwtav gsalisargw gdpevlhsfs karelaerlg
      781 dktqlfaavr gesacrtisg hllaanalan qcltlgmela hasgdsgyml eahhqlwgvn
      841 fylgnyktse vhasqgmaiy dyekhrhlaw gytghdpgvc crsfsaqmlc vcgnpdravq
      901 qsreavalae rdshpvslaq aqmalsvvhl mrrephdgrl waekaiavct dfamplllgq
      961 arvffgwala gvgqldegir qmregiaaia atgadmgmay ylcalaracg ergeasegla
     1021 lleqafdtla ksgssyqlpe llsakgells rldqgddaie gsfrqslaaa reqgarlael
     1081 raalrlarlw sdrgresear dllapayaaf negfgmpdla earavlqkls hhptasp
//
LOCUS       WP_258122856              65 aa            linear   BCT 02-MAR-2025
DEFINITION  efflux RND transporter permease subunit [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258122856
VERSION     WP_258122856.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 65)
  AUTHORS   Murakami,S., Nakashima,R., Yamashita,E. and Yamaguchi,A.
  TITLE     Crystal structure of bacterial multidrug efflux transporter AcrB
  JOURNAL   Nature 419 (6907), 587-593 (2002)
   PUBMED   12374972
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013069.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00873.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..65
                     /product="efflux RND transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=6626
     Region          <1..65
                     /region_name="AcrB"
                     /note="Multidrug efflux pump subunit AcrB [Defense
                     mechanisms]; COG0841"
                     /db_xref="CDD:440603"
ORIGIN      
        1 mglvaqlgvi alagmiirna viliqevden iarghtplda vvnasiqrar pivltacaai
       61 lgmip
//
LOCUS       WP_258122759             256 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258122759
VERSION     WP_258122759.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 256)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 256)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..256
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=26151
     Region          5..255
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(14,16..17,19,39..41,100..102,148..150,163,167,
                     193..196)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(124,150,163,167)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 msgrlankva lvtggsrgig raialafake gaaligvhya snakaaattv qeiealgsra
       61 vviradlrdg kaaadsiaeq frkaslaatg kagldilvnn agiavatpla qtseatfddl
      121 mtinfkapff liqalandir edgrvinvst gftriaapth payaaskgal etltlalape
      181 fasrgitvna vmpgvtetdm naawlatdar agaeglsvfs rvgqpadvad vitfiasnda
      241 rwttgqrida tggari
//
LOCUS       WP_258122948             464 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6513 domain-containing protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258122948
VERSION     WP_258122948.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040121.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20123.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..464
                     /product="DUF6513 domain-containing protein"
                     /calculated_mol_wt=49874
     Region          4..435
                     /region_name="TIGR00284"
                     /note="dihydropteroate synthase-related protein"
                     /db_xref="CDD:272997"
ORIGIN      
        1 maerlafltg hlakvrldrl laglgetefa weiidigvkv aalmsediik rrltltggad
       61 rvilpgryrg diehlsnhfg vpfvrgpdei adlpaflgra geppdlsrhd mrifaeivda
      121 pmlsvealva rartlaaaga dvidlgclpe tpfpsleeav ielkaqgflv svdsastdel
      181 sigaragady llsldentlq lafdhkavpv lipstpgdld slgraieaaq kagvafiadp
      241 vldpihfgfa aslgrfvear rrwpdvellm gtgnlteltd adssgvtavl aglcselqir
      301 nvlavhvsph tlrtieehdi arrilfaarn dgalprsyhp gllqvhdrkp ftastgdida
      361 laaevrdtnf rimtaedgih vfngkghava tdafelfagl gveadgahaf ylgaelmkae
      421 iawrlgkryv qdeplawgva apapetdrtr laeaghtlra kker
//
LOCUS       WP_258122955             364 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-grasp domain-containing protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258122955
VERSION     WP_258122955.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014686.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02655.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..364
                     /product="ATP-grasp domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=38893
     Region          2..360
                     /region_name="PylC"
                     /note="Pyrrolysine biosynthesis ligase PylC and related
                     enzymes, ATP-grasp superfamily [Amino acid transport and
                     metabolism]; COG2232"
                     /db_xref="CDD:441833"
ORIGIN      
        1 miaaisgral aaaarragyg plvadffcdt dtvalaeraa mlpgdlqggi dgariietlr
       61 qlagddrpva ivlgsgferm tetvdeiarh fplagnsgaa irrikdpqll aadcaelgip
      121 hpqfrwdrpp dpenwvvkta ggaggthirq aagetpatgr yfqrfvagrs isalfvgdgq
      181 tadivgfsqq waspapaapy ryggavrlrr fdrrqagmir gwlsglarra glvglcsadl
      241 irgpdgykli einprpgatl difddadapl ieahlraaag rayqlprfvd smasmvtyaa
      301 apiahfpsia wpewtadhqs pgtrliagdp vctifargps adltrrlikg qasrlqhqwe
      361 gdrt
//
LOCUS       WP_258122949             196 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF447 domain-containing protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258122949
VERSION     WP_258122949.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 196)
  AUTHORS   Smal,C., Aran,M., Lanzarotti,E., Papouchado,M., Foti,M.,
            Marti,M.A., Coria,S.H., Vazquez,S.C., Bercovich,A., Mac
            Cormack,W.P., Turjanski,A.G., Gallo,M. and Cicero,D.O.
  TITLE     1H, 15N and 13C chemical shift assignments of the BA42 protein of
            the psychrophilic bacteria Bizionia argentinensis sp. nov
  JOURNAL   Biomol NMR Assign 6 (2), 181-183 (2012)
   PUBMED   22201035
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016199.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04289.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..196
                     /product="DUF447 domain-containing protein"
                     /calculated_mol_wt=21438
     Region          4..181
                     /region_name="COG2457"
                     /note="Uncharacterized conserved protein, DUF447 domain
                     [Function unknown]"
                     /db_xref="CDD:441992"
ORIGIN      
        1 mpyiresiit tvnkagdvhi apigiiaekd gwviapfrps itldnlaevp faianytddv
       61 rifagcltgr khwptvavdg favprleaal ahsvleverv dddgmrprhf crvvqeetha
      121 pftgfnraka avlelailvs rlgmlprdki eaeiaylsia iektagegek eawgwlmqrv
      181 gdhlsvkesg geevrg
//
LOCUS       WP_258123087             295 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258123087
VERSION     WP_258123087.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 295)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..295
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=32283
     Region          2..295
                     /region_name="PRK11139"
                     /note="DNA-binding transcriptional activator GcvA;
                     Provisional"
                     /db_xref="CDD:182990"
ORIGIN      
        1 mripstqalr aldsfarhgs vwraadelhl trsavshqlr llerdlgfdl lerigkgval
       61 tprgqryasd vrkaltvlgd avtrhagtgv ggsfsvsctp gfaslflcth igefrqmypd
      121 valriltprr lddvsnaead afiafgvgnw pnrsvellce isftplcspt llnkiggfsr
      181 padvlranll hlgdtedwar wlalskvenp dieggiffsd mnlvfsaaia gqgiamgdel
      241 tsrralsegr lvrpfdiaik sprsyflvse hakashpvln vfvgwlrskl senqr
//
LOCUS       WP_258123175              87 aa            linear   BCT 02-MAR-2025
DEFINITION  metal-sensing transcriptional repressor [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258123175
VERSION     WP_258123175.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 87)
  AUTHORS   Sakamoto,K., Agari,Y., Agari,K., Kuramitsu,S. and Shinkai,A.
  TITLE     Structural and functional characterization of the transcriptional
            repressor CsoR from Thermus thermophilus HB8
  JOURNAL   Microbiology (Reading) 156 (Pt 7), 1993-2005 (2010)
   PUBMED   20395270
  REMARK    Erratum:[Microbiology. 2014 Dec;160(Pt 12):2820]
REFERENCE   2  (residues 1 to 87)
  AUTHORS   Tian,J., Wu,N., Li,J., Liu,Y., Guo,J., Yao,B. and Fan,Y.
  TITLE     Nickel-resistant determinant from Leptospirillum ferriphilum
  JOURNAL   Appl Environ Microbiol 73 (7), 2364-2368 (2007)
   PUBMED   17293508
REFERENCE   3  (residues 1 to 87)
  AUTHORS   Marrero,J., Auling,G., Coto,O. and Nies,D.H.
  TITLE     High-level resistance to cobalt and nickel but probably no
            transenvelope efflux: Metal resistance in the Cuban Serratia
            marcescens strain C-1
  JOURNAL   Microb Ecol 53 (1), 123-133 (2007)
   PUBMED   17186148
REFERENCE   4  (residues 1 to 87)
  AUTHORS   Liu,T., Ramesh,A., Ma,Z., Ward,S.K., Zhang,L., George,G.N.,
            Talaat,A.M., Sacchettini,J.C. and Giedroc,D.P.
  TITLE     CsoR is a novel Mycobacterium tuberculosis copper-sensing
            transcriptional regulator
  JOURNAL   Nat Chem Biol 3 (1), 60-68 (2007)
   PUBMED   17143269
REFERENCE   5  (residues 1 to 87)
  AUTHORS   Iwig,J.S., Rowe,J.L. and Chivers,P.T.
  TITLE     Nickel homeostasis in Escherichia coli - the rcnR-rcnA efflux
            pathway and its linkage to NikR function
  JOURNAL   Mol Microbiol 62 (1), 252-262 (2006)
   PUBMED   16956381
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014624.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02583.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..87
                     /product="metal-sensing transcriptional repressor"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=9426
     Region          6..87
                     /region_name="CsoR-like_DUF156"
                     /note="Transcriptional regulators CsoR (copper-sensitive
                     operon repressor), RcnR, and FrmR, and related domains;
                     this domain superfamily was previously known as DUF156;
                     cl00846"
                     /db_xref="CDD:445134"
     Site            order(9,12..13,16..17,20,23..24,26..27,30..33,35..37,
                     39..41,43..44,46..47,50..51,54..55,57..59,61..63,66,
                     76..85)
                     /site_type="other"
                     /note="putative homotetramer interface [polypeptide
                     binding]"
                     /db_xref="CDD:197385"
     Site            order(9,12..13,16..17,20,23..24,26..27,30..33,35..37,
                     39..41,43..44,46..47,50..51,54,57,61,79,82..85)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:197385"
     Site            order(35,61,79)
                     /site_type="other"
                     /note="putative allosteric switch controlling residues"
                     /db_xref="CDD:197385"
     Site            order(36,61,65)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:197385"
     Site            order(55,58..59,62..63,65..66,76..78,80..81)
                     /site_type="other"
                     /note="putative homodimer-homodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:197385"
ORIGIN      
        1 msvsihrshp ailnrlkraq ghlaavlsmf eahrpcvdla qqlhavesai ssakrelihd
       61 hiehcltdta eaggnslael kqlakyl
//
LOCUS       WP_417281909             226 aa            linear   BCT 02-MAR-2025
DEFINITION  hypothetical protein [Catellatospora aurea].
ACCESSION   WP_417281909
VERSION     WP_417281909.1
KEYWORDS    RefSeq.
SOURCE      Catellatospora aurea
  ORGANISM  Catellatospora aurea
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Catellatospora.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Catellatospora aurea"
                     /db_xref="taxon:1337874"
     Protein         1..226
                     /product="hypothetical protein"
                     /calculated_mol_wt=22913
ORIGIN      
        1 mavsllaagt gtggataasp paasaplgrp aaaqprtvtl vtgdqvtsyg sghiavaprd
       61 gvrflryava dhryvipsda lpllrsdrld rrlfdvtall eagydkhasl glvvsgvtgd
      121 saaaprelks irklaavrgy takvgkekla aywksltssv avksgsqgkv wldglrkptl
      181 dastaqigap sawsagfdgt gvtvsgaghg nrhhssgldg qghlap
//
LOCUS       WP_258123077             241 aa            linear   BCT 02-MAR-2025
DEFINITION  3-keto-5-aminohexanoate cleavage protein [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258123077
VERSION     WP_258123077.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 241)
  AUTHORS   Bastard,K., Smith,A.A., Vergne-Vaxelaire,C., Perret,A.,
            Zaparucha,A., De Melo-Minardi,R., Mariage,A., Boutard,M.,
            Debard,A., Lechaplais,C., Pelle,C., Pellouin,V., Perchat,N.,
            Petit,J.L., Kreimeyer,A., Medigue,C., Weissenbach,J.,
            Artiguenave,F., De Berardinis,V., Vallenet,D. and Salanoubat,M.
  TITLE     Revealing the hidden functional diversity of an enzyme family
  JOURNAL   Nat Chem Biol 10 (1), 42-49 (2014)
   PUBMED   24240508
REFERENCE   2  (residues 1 to 241)
  AUTHORS   Bellinzoni,M., Bastard,K., Perret,A., Zaparucha,A., Perchat,N.,
            Vergne,C., Wagner,T., de Melo-Minardi,R.C., Artiguenave,F.,
            Cohen,G.N., Weissenbach,J., Salanoubat,M. and Alzari,P.M.
  TITLE     3-Keto-5-aminohexanoate cleavage enzyme: a common fold for an
            uncommon Claisen-type condensation
  JOURNAL   J Biol Chem 286 (31), 27399-27405 (2011)
   PUBMED   21632536
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017652.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05853.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..241
                     /product="3-keto-5-aminohexanoate cleavage protein"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /GO_function="GO:0043720 - 3-keto-5-aminohexanoate
                     cleavage activity [Evidence IEA]"
                     /GO_process="GO:0019475 - L-lysine catabolic process to
                     acetate [Evidence IEA]"
                     /calculated_mol_wt=25291
     Region          2..226
                     /region_name="BKACE"
                     /note="beta-keto acid cleavage enzyme; cl15827"
                     /db_xref="CDD:472835"
ORIGIN      
        1 mivqtcinga rsadfhpqlp lnaeamarvg aacvaagaae lhvhargldg reslapdamn
       61 ptvlalrrac pgtligvstg twienddert laaiagwgel pdyasvnlse daapevmerl
      121 rqrgvgieag lasvtdaerl vrldrgsqvl rilieiseqe ldaalevcdg iaavldhagv
      181 rraillhgad atvwpfvrra aernwstrvg ledgkalpdg ttawgnaalt aaavailras
      241 r
//
LOCUS       WP_258123359             537 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258123359
VERSION     WP_258123359.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 537)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 537)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 537)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 537)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..537
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=58587
     Region          101..506
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 msdmirmsrr rllasggkaa vlvaaagiap kfirpsraya adalapgmig gptgfdgser
       61 yqygpdtpeg raieaakamk gagkapakiv lglsdgsigq ltqpfpagap sikdlweket
      121 gipleivgvp ngqeftktmq distkggayd iyavewnrlg dlaetggilk lddfvaqykp
      181 ewddpergyv ngakgvslln qyrgstygvs ldgdfqtwvy ridlfgaaae kkafsdkhgy
      241 elapprtwkq hdeiaaffqr pdkglfgstd lrnqgwgytn wyqryvsmas pnqflfddtg
      301 kplinseqgv aatneyiasl ahhspdaisw gwpeqygnfa kggaamtcaf snlpkfldna
      361 gnkdsavtgk igsmlppgre idgklisrsv lwlnlsasvs sqaknpeacy lflqwlgssr
      421 iyawmtanpg gyfdpfrlsd fsdrlvrqty hayhmdvvre tvartvptin ypgatafhna
      481 ldenlvaalt kaktaeqamv dteaewkkia rrtgeeklle aiktnkeawp tvldpis
//
LOCUS       WP_258123387             821 aa            linear   BCT 02-MAR-2025
DEFINITION  adenylate/guanylate cyclase domain-containing protein
            [Mesorhizobium onobrychidis].
ACCESSION   WP_258123387
VERSION     WP_258123387.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00211.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..821
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..821
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /GO_process="GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA]"
                     /GO_process="GO:0035556 - intracellular signal
                     transduction [Evidence IEA]"
                     /calculated_mol_wt=89532
     Region          1..>422
                     /region_name="COG4192"
                     /note="Signal transduction histidine kinase regulating
                     phosphoglycerate transport system [Signal transduction
                     mechanisms]"
                     /db_xref="CDD:443346"
     Region          371..772
                     /region_name="AcyC"
                     /note="Adenylate cyclase, class 3 [Signal transduction
                     mechanisms]; COG2114"
                     /db_xref="CDD:441717"
ORIGIN      
        1 mlerlgirgr lllaffgisa favlataaal yaflqvgdvv dritrdrvps alaslqlsrq
       61 aervaaiapa vltltskarh nevsaaigve mtrleellaa lkgaalgtpa vaeieaavlg
      121 lrrnldaldd lvatrlavva rkeellrrls attiagqrlv apgilvmnsr laqwraaada
      181 slapdrsaav madlvqaiaa yipqqrahqe msavndalvr tadastpgdl alilfplrrs
      241 laaletisae ideklqvrfr qrvdefkali dgeksipkar qdelavlaqg ekllgennrl
      301 srsltaavdr lvaaadreit asgleaavvq rygtgvvlgs aflsllssvl vvwlyvdrsl
      361 larlgavsqg mfaiaggnlr aplpaagrde igrmadalrl frdtavevee knlrevaear
      421 qrlvdaiesi segfalydge drlvlsnsry rellysdlai elapgttfeq iirrsaergy
      481 ikdaegrfee wvaerlsrhr npgepwvqrr gdgrwimige rritgggtva vysditelkq
      541 reenlaqksa alealsnkla kylapqvyks ifsgrqdvri asqrkkltic fsdiagftet
      601 tdkmesedlt qllnhyltem skiasdhgat idkyvgdail mffgdpetrg vkedalacve
      661 malamqkrms dlaeiwrdig ietplrcrig ihtdyctvgn fgsedrmdyt iiggavnlas
      721 rleqeappga vlisyetfaq vkdtidcvel ghvqvrgiay pvatyrvldl kanlvaagsa
      781 vrtelphlrl eaepelmsag ereeaatalr dvldrlchkp g
//
LOCUS       WP_258123315             577 aa            linear   BCT 02-MAR-2025
DEFINITION  portal protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258123315
VERSION     WP_258123315.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 577)
  AUTHORS   Nakasu,S., Fujisawa,H. and Minagawa,T.
  TITLE     Purification of characterization of gene 8 product of bacteriophage
            T3
  JOURNAL   Virology 143 (2), 422-434 (1985)
   PUBMED   3904172
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023657.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12236.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..577
                     /product="portal protein"
                     /calculated_mol_wt=63593
     Region          10..522
                     /region_name="Head-tail_con"
                     /note="Bacteriophage head to tail connecting protein;
                     cl19541"
                     /db_xref="CDD:450324"
ORIGIN      
        1 mtsdsrahdi lsrqaelete rsqyevvwea vsefcdpdap dvwsgrrqsg aatqaerqer
       61 rgarvyanti nsaanrlaag lesliipqse kwhglstaam ndeetdeeke waealrdflf
      121 alrysansnf vpatqaclrn vvrygpayly aeegfggtli ryasipvveg ylcrnrwgqv
      181 difhrryert arqsaqllgy eklparikml vddpakcetk isliqciqpr derkmyrlgg
      241 syqyldtafa syhviedeev ivresgfrsf pvscfnwrry egdpygispt iealttvree
      301 navrrsglra lqqitdpata skarldyvpv lnpgenypgl iddngrplia pivtgqnpty
      361 afdyaesrae eirdmmfvnl fqtlvqnpqm tatealirqe ekgallgpsg siiqagfaan
      421 ldrelgiled kglyeedsrf lppaslagka vrptftgpld vlrrsaeard tiqvvttamq
      481 maqfdpgvmd nidgdealki vqsagrspqr ifrrhdevad irdarakaqa aqagmaaiat
      541 agkvagdavp aavqardsgl ldglsglmpq ggeggga
//
LOCUS       WP_258123548             710 aa            linear   BCT 02-MAR-2025
DEFINITION  adenylate/guanylate cyclase domain-containing protein
            [Mesorhizobium onobrychidis].
ACCESSION   WP_258123548
VERSION     WP_258123548.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012437.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00211.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..710
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /GO_process="GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA]"
                     /GO_process="GO:0035556 - intracellular signal
                     transduction [Evidence IEA]"
                     /calculated_mol_wt=77421
     Region          <257..353
                     /region_name="dCache_1"
                     /note="Cache domain; pfam02743"
                     /db_xref="CDD:460673"
     Region          320..709
                     /region_name="AcyC"
                     /note="Adenylate cyclase, class 3 [Signal transduction
                     mechanisms]; COG2114"
                     /db_xref="CDD:441717"
     Region          534..708
                     /region_name="Guanylate_cyc"
                     /note="Adenylate and Guanylate cyclase catalytic domain;
                     pfam00211"
                     /db_xref="CDD:425528"
     Site            order(541,543..548,583,585..587,590,652..654,658..659,
                     662..663,698)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(543,587)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(548,560,563..564,567,571,583..584,640,643,653..656,
                     659,698)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
ORIGIN      
        1 mssthvtgsp rparwglaak lftilallga iavlvtgvlg yfrardalek avfdqlmaar
       61 qtksrqvety frtiqadlrl lstskmvvda trefriavdq ldrasaspel rqkvsdwyad
      121 nflpritrvf grepavadym pvgaapyylq yhyivanphp kerrklldda gdgsdysrlh
      181 avyhpviraa aatvgffdlm vadvksgrli ytvekevdft tslqigpyrn ssvaevvarc
      241 alspdrsaic ledfapyaps ngapiafmga pvidqgvvig vliaqlsnee idnvvtggrr
      301 wrqegfgntg eaylvgpdyl vrsgprtfye drekyfaelk svgtsdeeia tiqrygtpvl
      361 hqridtratq aalggvegtg eiigyrgvpt laswgplaip gvtwalvaki dsaeafapia
      421 qlrqnllvvg glallvvvat aawlsramlg plreltagvm rfaagdygts vpvrtrdeig
      481 qlcsafnsmv kdlheknivi enknreneal llnvlpapia nrlrggeegi adgfaevtva
      541 fadivgftal tsempphevv tflnglftrf daaaqdlgie kiktvgdaym avcglpvpvp
      601 nhaermvrma irmihitreh amehkipmki rvgvnsgpvv agvigkskyi ydlwgdtvnl
      661 asrmesggia dsvqvtravy eqlkdqfvfe prgaievrgk gkveawllrl
//
LOCUS       WP_258123601             144 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF1636 family protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258123601
VERSION     WP_258123601.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019460.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07845.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..144
                     /product="DUF1636 family protein"
                     /calculated_mol_wt=15096
     Region          23..138
                     /region_name="COG5469"
                     /note="Predicted metal-binding protein [Function unknown]"
                     /db_xref="CDD:444220"
ORIGIN      
        1 merdssfpae tagvlsgdre alagvtvivc ascrdetgsd ahpragella edtgraasge
       61 nihirtvecl gnckrrlsaa ilrdgcwsyv fgdltatsga dlvagaklfa tstdglipwr
      121 grpdclkrgl varippldll kdqi
//
LOCUS       WP_258123718             378 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease [Mesorhizobium onobrychidis].
ACCESSION   WP_258123718
VERSION     WP_258123718.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 378)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024110.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12698.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..378
                     /product="ABC transporter permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=41114
     Region          <2..371
                     /region_name="ABC2_perm_RbbA"
                     /note="ribosome-associated ATPase/putative transporter
                     RbbA; NF033858"
                     /db_xref="CDD:468210"
ORIGIN      
        1 mnsvfslarl galltkefiq mrrdritfam mlgvplmqlv lfgyainndp kslpaalvam
       61 sndpytramv salqttgyyr fdhvaesaae aeflmargdv afvvtipadf arrvergdqp
      121 qilieadatd pavasgaist lgtvanqall rargmqetaa eaargqlevv vhrrynpegi
      181 sqynivpgll gvilqmtmvm mtsialtret ergtmenlla mpsspleiml gkvlpylavg
      241 avqvvvvlaa akllfaipft gsmpllltav lifvlalvll gytistmart qmqalqltff
      301 fflpsimlsg fmfpyrgmpg waqafgevlp lthflriira vmlkgaelpa vateigwlvv
      361 fvalfaglal vrfrrtld
//
LOCUS       WP_258123679             622 aa            linear   BCT 02-MAR-2025
DEFINITION  phospholipase D-like domain-containing protein [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258123679
VERSION     WP_258123679.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024491.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13091.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..622
                     /product="phospholipase D-like domain-containing protein"
                     /calculated_mol_wt=68546
     Region          194..341
                     /region_name="PLDc_SF"
                     /note="Catalytic domain of phospholipase D superfamily
                     proteins; cl15239"
                     /db_xref="CDD:472788"
     Site            order(287,289,307,309,320)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197200"
     Site            287
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197200"
     Region          401..580
                     /region_name="PLDc_SF"
                     /note="Catalytic domain of phospholipase D superfamily
                     proteins; cl15239"
                     /db_xref="CDD:472788"
     Site            order(522,524,541,543,554)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197200"
     Site            522
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197200"
ORIGIN      
        1 msdvvsvraa tnnevafiaw didgmidgcl gfeivriypg tgeerclasw vpfkgqrnkd
       61 wipqdtgvwp vqktfwrdlt vrrrrdslei rpdgemvayr vrpigdmrpg ldpvpvrpek
      121 aytgaarplg ylgqgavspt iflgsmfgka rlaftngvls tqwlsraled agikvgqrdk
      181 iraelqrpgs kiraylhgev pdlltslmkr akaeggtvrl alyelgddel cdaiidakdv
      241 vdvilsnsgr deqtkawdag napfrkrlre agvvltdrlf nnnhighnkf avyrdaqgnp
      301 qavmtgstnw tstgicgqsn nafirddpam aevfdaywer mkadvfpppa sesapgrvaq
      361 kqgkpfrlkn rtpnhvngtt iwfspndpdr snkdisvrpv dledvfarik aakeavlflv
      421 fnpsrlgnns vidqavaaat anpklivqga isdhtampny vaptrdpvtr ksnkdgkspf
      481 vfpekvweap nvsivraanl tgasvardfq aevltvghai vhdkiviidp madnatviag
      541 shnlgykasy endenmvive gdktfaaafa vhmldvfdhy kfrawrrtig egpsdndgls
      601 iddkwlkpya egrkgaiary fp
//
LOCUS       WP_258123662             232 aa            linear   BCT 02-MAR-2025
DEFINITION  fatty acid desaturase [Mesorhizobium onobrychidis].
ACCESSION   WP_258123662
VERSION     WP_258123662.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 232)
  AUTHORS   Shen,J., Wu,G., Tsai,A.L. and Zhou,M.
  TITLE     Structure and Mechanism of a Unique Diiron Center in Mammalian
            Stearoyl-CoA Desaturase
  JOURNAL   J Mol Biol 432 (18), 5152-5161 (2020)
   PUBMED   32470559
REFERENCE   2  (residues 1 to 232)
  AUTHORS   Wang,H., Klein,M.G., Zou,H., Lane,W., Snell,G., Levin,I., Li,K. and
            Sang,B.C.
  TITLE     Crystal structure of human stearoyl-coenzyme A desaturase in
            complex with substrate
  JOURNAL   Nat Struct Mol Biol 22 (7), 581-585 (2015)
   PUBMED   26098317
REFERENCE   3  (residues 1 to 232)
  AUTHORS   Lindqvist,Y., Huang,W., Schneider,G. and Shanklin,J.
  TITLE     Crystal structure of delta9 stearoyl-acyl carrier protein
            desaturase from castor seed and its relationship to other di-iron
            proteins
  JOURNAL   EMBO J 15 (16), 4081-4092 (1996)
   PUBMED   8861937
REFERENCE   4  (residues 1 to 232)
  AUTHORS   Shanklin,J. and Somerville,C.
  TITLE     Stearoyl-acyl-carrier-protein desaturase from higher plants is
            structurally unrelated to the animal and fungal homologs
  JOURNAL   Proc Natl Acad Sci U S A 88 (6), 2510-2514 (1991)
   PUBMED   2006187
REFERENCE   5  (residues 1 to 232)
  AUTHORS   Wada,H., Gombos,Z. and Murata,N.
  TITLE     Enhancement of chilling tolerance of a cyanobacterium by genetic
            manipulation of fatty acid desaturation
  JOURNAL   Nature 347 (6289), 200-203 (1990)
   PUBMED   2118597
REFERENCE   6  (residues 1 to 232)
  AUTHORS   Kaestner,K.H., Ntambi,J.M., Kelly,T.J. Jr. and Lane,M.D.
  TITLE     Differentiation-induced gene expression in 3T3-L1 preadipocytes. A
            second differentially expressed gene encoding stearoyl-CoA
            desaturase
  JOURNAL   J Biol Chem 264 (25), 14755-14761 (1989)
   PUBMED   2570068
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012699.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00487.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..232
                     /product="fatty acid desaturase"
                     /EC_number="1.14.19.-"
                     /GO_process="GO:0006629 - lipid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=26736
     Region          <2..221
                     /region_name="Membrane-FADS-like"
                     /note="The membrane fatty acid desaturase
                     (Membrane_FADS)-like CD includes membrane FADSs, alkane
                     hydroxylases, beta carotene ketolases (CrtW-like),
                     hydroxylases (CrtR-like), and other related proteins. They
                     are present in all groups of organisms with the...;
                     cl00615"
                     /db_xref="CDD:445012"
     Site            order(2,6,38,41..42,184,187..188)
                     /site_type="other"
                     /note="putative di-iron ligands [ion binding]"
                     /db_xref="CDD:239588"
ORIGIN      
        1 mhetihetaf rtpwlnraia tvtgflillp pawfryfhfa hhrhthdpdn dpelmapkpe
       61 tiaqylryls gisywsgmar vivvnaagrn rdgfvpdkgr dkvisearwf liayavllaa
      121 slavqsalll wgwivpvlvg qpflraylla ehalcphvan mlentrttft trlvrfvawn
      181 mpyhsehhsy pavpfhrlpr fhqivaehlr ttergyirfh rklvgsfdrr ag
//
LOCUS       WP_258123755             547 aa            linear   BCT 02-MAR-2025
DEFINITION  CHASE domain-containing protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258123755
VERSION     WP_258123755.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 547)
  AUTHORS   Heyl,A., Wulfetange,K., Pils,B., Nielsen,N., Romanov,G.A. and
            Schmulling,T.
  TITLE     Evolutionary proteomics identifies amino acids essential for
            ligand-binding of the cytokinin receptor CHASE domain
  JOURNAL   BMC Evol Biol 7, 62 (2007)
   PUBMED   17439640
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 547)
  AUTHORS   Mougel,C. and Zhulin,I.B.
  TITLE     CHASE: an extracellular sensing domain common to transmembrane
            receptors from prokaryotes, lower eukaryotes and plants
  JOURNAL   Trends Biochem Sci 26 (10), 582-584 (2001)
   PUBMED   11590001
REFERENCE   3  (residues 1 to 547)
  AUTHORS   Anantharaman,V. and Aravind,L.
  TITLE     The CHASE domain: a predicted ligand-binding module in plant
            cytokinin receptors and other eukaryotic and bacterial receptors
  JOURNAL   Trends Biochem Sci 26 (10), 579-582 (2001)
   PUBMED   11590000
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10007605
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..547
                     /product="CHASE domain-containing protein"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=60271
     Region          4..546
                     /region_name="CHASE1"
                     /note="Extracytoplasmic sensor domain CHASE1 (specificity
                     unknown) [Signal transduction mechanisms]; COG3614"
                     /db_xref="CDD:442832"
ORIGIN      
        1 mkkffpivaf iavalisltm agfayfatqe aarikfeata ddalnridsr idlhlsllrs
       61 thalfearng gisrgefkaf fealgindnf tglrgigflr lvragdeaav erailhdyga
      121 shaiypattt lpwrtpitlf epldpsnqss igydmftepv rreaierama dnqqhasgrv
      181 qlgqetgaaq tftgflvfvr lnvetaqdgi dgsssstsgf lyaafrardl fqtalsrtpl
      241 lpvnieiydg kvdadhllfq setppastlg drllvsreit iagrpwtvlf rptsafsqps
      301 sraipvmlgl fglllagtia lvaryqeray davsllhett eksllekdlm lqemkhrikn
      361 sitrvlaiar qtashatdvh efsssfsarl qamaasqdml trsrwqkadl gdllrielgq
      421 vfgkelpegi lsgpevllde tttqalgltf helatnalky getgnsvnar tgewslkvdw
      481 svegrrsdrt lvlnwreagq kkleppvktg fgtklidlnv trelrgtinr dfhdgglsve
      541 iriplld
//
LOCUS       WP_258123757              64 aa            linear   BCT 02-MAR-2025
DEFINITION  NepR family anti-sigma factor [Mesorhizobium onobrychidis].
ACCESSION   WP_258123757
VERSION     WP_258123757.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 64)
  AUTHORS   Campagne,S., Damberger,F.F., Kaczmarczyk,A., Francez-Charlot,A.,
            Allain,F.H. and Vorholt,J.A.
  TITLE     Structural basis for sigma factor mimicry in the general stress
            response of Alphaproteobacteria
  JOURNAL   Proc Natl Acad Sci U S A 109 (21), E1405-E1414 (2012)
   PUBMED   22550171
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037848.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18557.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..64
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..64
                     /product="NepR family anti-sigma factor"
                     /GO_function="GO:0016989 - sigma factor antagonist
                     activity [Evidence IEA]"
                     /calculated_mol_wt=6972
     Region          24..56
                     /region_name="NepR"
                     /note="Anti-sigma factor NepR; pfam18557"
                     /db_xref="CDD:465800"
ORIGIN      
        1 mtkdttagaa nrrraasgdp lgpnseigrk lkqyydelis dnvpdrfaql lsqleqaqpa
       61 rkkd
//
LOCUS       WP_258123872             709 aa            linear   BCT 02-MAR-2025
DEFINITION  ASKHA domain-containing protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258123872
VERSION     WP_258123872.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 709)
  AUTHORS   Hennig,S.E., Jeoung,J.H., Goetzl,S. and Dobbek,H.
  TITLE     Redox-dependent complex formation by an ATP-dependent activator of
            the corrinoid/iron-sulfur protein
  JOURNAL   Proc Natl Acad Sci U S A 109 (14), 5235-5240 (2012)
   PUBMED   22431597
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025925.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14574.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..709
                     /product="ASKHA domain-containing protein"
                     /calculated_mol_wt=76000
     Region          28..672
                     /region_name="COG3894"
                     /note="Uncharacterized 2Fe-2S and 4Fe-4S
                     clusters-containing protein, contains DUF4445 domain
                     [Function unknown]"
                     /db_xref="CDD:443101"
ORIGIN      
        1 maaagavavk pvwpedkrat vnspanitdp lvlfmpsgkr grfpvgtpvl daarqlgvyv
       61 esvcggratc grcqvevqeg nfakhkivss ndhispkgak eeryervrgl perrrlscsa
      121 qilgdlvvdv pqdtvinaqt irkdadtrvi ardsaihmcy veieepdmhn psgdldrlki
      181 almkdwglks ldfdfhllpq vqgilrkgnw tataaihkda esetarvial wpglkneayg
      241 lacdigstti amhlvsllsg rvaassgtsn pqirfgedlm srvsyvmmnp dgregmtvav
      301 reaisglvdk vcaegnvqrn dildsvfvgn pimhhlflgi dptelggapf alavsgavhi
      361 kaldiglkln qgarlymlpc iaghvgadaa avtlsegphr qdemmlivdv gtnaeivlgn
      421 rqrvvaassp tgpafegaei sggqraapga iervridpdt lepkyrvigs elwsdepgfl
      481 dsvqatgvtg icgsgiievv aemylagiis edgvvdggls arsprvtang rtfsyvlkeg
      541 eprititqtd vraiqlakaa lyagtkllme kqhtdhvdri hfagafgsfi dpkyamvlgl
      601 ipdcdldkvs avgnaagaga rmallnrgyr reieetvsri ekietalesk fqehfvyama
      661 lpnkvdpfpk lsaavklppr ktvsedgiag daaprrrsre ghaarrgrg
//
LOCUS       WP_258123782             257 aa            linear   BCT 02-MAR-2025
DEFINITION  metallophosphoesterase [Mesorhizobium onobrychidis].
ACCESSION   WP_258123782
VERSION     WP_258123782.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 257)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     Phosphoesterase domains associated with DNA polymerases of diverse
            origins
  JOURNAL   Nucleic Acids Res 26 (16), 3746-3752 (1998)
   PUBMED   9685491
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012376.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00149.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..257
                     /product="metallophosphoesterase"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=28132
     Region          20..242
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Site            order(24,26,58,89..90,173,212)
                     /site_type="active"
                     /db_xref="CDD:277317"
     Site            order(24,26,58,89,173,212)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277317"
ORIGIN      
        1 mttpgihfld argpegmriy avgdvhgrld llaamyrria aeirqarpad wrvihlgdyv
       61 drgpdskgvi dflievrkrd prhlmlagnh digfldflds pdpdglfiry ggiqtaqsyg
      121 vainegggaw fgrsdaalrq ghaalveavp kshveflqsl pfsltfgdff fchagirpgi
      181 alesqstqdl iwirdvfhnh sglhpkivvh ghtpvpeaev mvnrvnidtl ayqtgnlsal
      241 vvdgadkril vvsgerg
//
LOCUS       WP_258123963             325 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Mesorhizobium onobrychidis].
ACCESSION   WP_258123963
VERSION     WP_258123963.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..325
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=35171
     Region          <7..249
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 mpglnnyvaq dapvlqrlvl slaagycdlc ehiiaptrsi adllrhhdvt kpitiiptgi
       61 dlarfaegdr lrlrsrlrla etdfivghvg rlapeknlty lteavclfls qnerahfvaa
      121 gdgasasemr rmldeaglqg rchllgvveg aeladvyaam dvfafssrse tqglvlveam
      181 atgvpvvgln epgvrevvrn akngyllsad aspgqfskal arvraitapg raalqeearq
      241 taasihdprp rsrpsisirr lsqampvpel palvllrrrs kvssrngess ptlpmpsrtr
      301 wrravipksd gcgtlclrln ycdps
//
LOCUS       WP_258123980             591 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258123980
VERSION     WP_258123980.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 591)
  AUTHORS   Das,A.K., Cohen,P.W. and Barford,D.
  TITLE     The structure of the tetratricopeptide repeats of protein
            phosphatase 5: implications for TPR-mediated protein-protein
            interactions
  JOURNAL   EMBO J 17 (5), 1192-1199 (1998)
   PUBMED   9482716
REFERENCE   2  (residues 1 to 591)
  AUTHORS   Lamb,J.R., Tugendreich,S. and Hieter,P.
  TITLE     Tetratrico peptide repeat interactions: to TPR or not to TPR?
  JOURNAL   Trends Biochem Sci 20 (7), 257-259 (1995)
   PUBMED   7667876
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019339.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07719.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..591
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=64647
     Region          <24..539
                     /region_name="PEP_TPR_lipo"
                     /note="putative PEP-CTERM system TPR-repeat lipoprotein;
                     TIGR02917"
                     /db_xref="CDD:274350"
     Site            order(43..44,47..48,50,74,77..78,81..82,84..85,107,
                     111..112,115..116,119)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          43..67
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          72..101
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          106..135
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          313..339
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          349..373
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          380..407
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          419..445
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(421..422,425..426,428,452,455..456,459..460,
                     462..463,487,490..491,494..495,498)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          450..481
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          486..514
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          519..549
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mrqgcarwlt glaivtgmai sglpayaket tepvnitsfs gaylaarvae gdndldsaia
       61 yykqalafap gdtslqqslm lsliaqgrfe eslvyadklk tvpdverfsr lalavgsfhk
      121 kdfskaeywl klslesdldr lisgvmtgwa kqgagdasea masidrlqgp dwfglfksfh
      181 raliadasgl penadaiyaa tlqdtatgsa apetwmrnaq ayasflarkg dkdkalsvld
      241 qaeafapgkv eisalrdkit kgekvepfva gpsdgaseil ldlatalnrg ggepfvrlyl
      301 qyalalrpds daalvqlaav seqlkdgega iafyrrvpas splkalselq lglnladldr
      361 ydeaiahlka lveahpgdmr ayqalggvya skedfrsaag lydkavavlk tptradwnif
      421 yqrgiayerl kewpkaepnf rkalelfpdq pqvlnylgys wvdmninlee glqmiqkavd
      481 lrpsdgyivd slgwayfrmg rfedavreme ravslkpedp vlndhlgday wrvgrrleat
      541 fqwnqardlk pdpdvlaalq qkllkglppi esntaqetpk vkpepapapk g
//
LOCUS       WP_258124033             141 aa            linear   BCT 02-MAR-2025
DEFINITION  group II intron maturase-specific domain-containing protein
            [Mesorhizobium onobrychidis].
ACCESSION   WP_258124033
VERSION     WP_258124033.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 141)
  AUTHORS   Centron,D. and Roy,P.H.
  TITLE     Presence of a group II intron in a multiresistant Serratia
            marcescens strain that harbors three integrons and a novel gene
            fusion
  JOURNAL   Antimicrob Agents Chemother 46 (5), 1402-1409 (2002)
   PUBMED   11959575
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019984.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08388.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..141
                     /product="group II intron maturase-specific
                     domain-containing protein"
                     /calculated_mol_wt=16238
     Region          2..68
                     /region_name="GIIM"
                     /note="Group II intron, maturase-specific domain;
                     pfam08388"
                     /db_xref="CDD:429966"
ORIGIN      
        1 mkgnagvtqe vliqnlnpvi rgwamyhrhv vakasfssid shiwqmlwkw asrrhpmkga
       61 rwvrnryfrv dghrswdfat kgpadastsg crlframtip itrhvkirgl anpfdpvwct
      121 yfarrriakr sgqlfgatpw c
//
LOCUS       WP_258124044             112 aa            linear   BCT 02-MAR-2025
DEFINITION  aminoglycoside phosphotransferase family protein [Brucella
            anthropi].
ACCESSION   WP_258124044
VERSION     WP_258124044.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 112)
  AUTHORS   Davies,J. and Wright,G.D.
  TITLE     Bacterial resistance to aminoglycoside antibiotics
  JOURNAL   Trends Microbiol 5 (6), 234-240 (1997)
   PUBMED   9211644
REFERENCE   2  (residues 1 to 112)
  AUTHORS   Kormanec,J., Farkasovsky,M., Potuckova,L. and Godar,S.
  TITLE     A gene (hur) from Streptomyces aureofaciens, conferring resistance
            to hydroxyurea, is related to genes encoding streptomycin
            phosphotransferase
  JOURNAL   Gene 114 (1), 133-137 (1992)
   PUBMED   1316866
REFERENCE   3  (residues 1 to 112)
  AUTHORS   Tohyama,H., Okami,Y. and Umezawa,H.
  TITLE     Nucleotide sequence of the streptomycinphosphotransferase and
            amidinotransferase genes from Streptomyces griseus
  JOURNAL   Nucleic Acids Res 15 (4), 1819-1833 (1987)
   PUBMED   3029728
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016533.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04655.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..112
                     /product="aminoglycoside phosphotransferase family
                     protein"
                     /GO_function="GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA]"
                     /GO_process="GO:0006468 - protein phosphorylation
                     [Evidence IEA]"
                     /GO_process="GO:0019748 - secondary metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=12488
     Region          <6..110
                     /region_name="StrB"
                     /note="Streptomycin 6-kinase [Defense mechanisms];
                     COG3570"
                     /db_xref="CDD:442791"
ORIGIN      
        1 mgnagynvld fgpergwlai dpkglfgerg fdyaimflnp dltapyhria vdrgrflrrl
       61 dlvaeaadle rhrllrwila wcglscvwss hdddavsvai evarfaaael dl
//
LOCUS       WP_258124145             704 aa            linear   BCT 02-MAR-2025
DEFINITION  trypsin-like peptidase domain-containing protein [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258124145
VERSION     WP_258124145.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024758.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13365.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..704
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /calculated_mol_wt=76039
     Region          121..336
                     /region_name="eMpr"
                     /note="V8-like Glu-specific endopeptidase
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG3591"
                     /db_xref="CDD:442810"
     Region          389..657
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(395,428,534,572,574,614,649..650)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     Site            order(428,649)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:197306"
     Site            order(534,574,650)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197306"
ORIGIN      
        1 mngdqeqiar ivsevlsqlg yqadtsipai araaatltdt atssplqrph altdipfved
       61 vdplappfsd vgtkggvddp trmlrgwtgs metelvleta vgryltspaa llhvlgdrrr
      121 avaivstqgt dykgergqws gtgflvgpnl fltnhhvlns ldvavaakie fnyeitpenl
      181 llgngappqa tqifaldpdr lfvtsptqgg ldytfvwied aaqatfgaip merssftvee
      241 gaqafvvhhp dgrpkevsld dtdilgiktt iihyssdtmg gssgapvfdh rgrlialhha
      301 srrqavdlpd ggqsdvvneg ikiaaiaidl enrmrsggad asfaetilrq vkgsdtmsgy
      361 fggigreias gatgpeavvd tyrgtdqdid igfwniewla tkwtdekkln gaarviadln
      421 ldawglseis pagvealvsr iehiygdryd cafsepdapq gkqstamiwk ksalfgesin
      481 wpasiepllr qrsddpgvgv eavhgkifdr rpglfrfrts gdlpaysffa vplhlkamde
      541 gslrrrlasr imaraveeis reygldvilg gdmnaplasg dfatieqagf tilgaqdeqd
      601 gaftylkapk saidniflsp gmkqtvgatd yfiiakersm sdfirsvsdh rpvamrlsla
      661 kaarpagate aadldaiida mlisekaqrt rrgqrrrspt trpq
//
LOCUS       WP_258124163             233 aa            linear   BCT 02-MAR-2025
DEFINITION  type IV secretion system protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258124163
VERSION     WP_258124163.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 233)
  AUTHORS   Christie,P.J.
  TITLE     Type IV secretion: the Agrobacterium VirB/D4 and related
            conjugation systems
  JOURNAL   Biochim Biophys Acta 1694 (1-3), 219-234 (2004)
   PUBMED   15546668
REFERENCE   2  (residues 1 to 233)
  AUTHORS   Yeo,H.J., Yuan,Q., Beck,M.R., Baron,C. and Waksman,G.
  TITLE     Structural and functional characterization of the VirB5 protein
            from the type IV secretion system encoded by the conjugative
            plasmid pKM101
  JOURNAL   Proc Natl Acad Sci U S A 100 (26), 15947-15952 (2003)
   PUBMED   14673074
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019608.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07996.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..233
                     /product="type IV secretion system protein"
                     /calculated_mol_wt=24010
ORIGIN      
        1 mkrliisasv ivlasaasaq vpvidganfd vakqtaattd kilgtnkeil ttveqtlksv
       61 tgdrgsdanq mqdlavgngf svssmpsfds llqggvpnfg gmggdiakva ttfinglqlv
      121 kslsgqanst fsgdksyeel vntvlgvaal vngsqqaaqt rksafeqagq qigqaqdikg
      181 sidqntqlqv qagltineli gvmngavssl qadnqrrltd isnskkalny sgn
//
LOCUS       WP_258124192             337 aa            linear   BCT 02-MAR-2025
DEFINITION  caspase family protein [Mesorhizobium onobrychidis].
ACCESSION   WP_258124192
VERSION     WP_258124192.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 337)
  AUTHORS   Wilson,K.P., Black,J.A., Thomson,J.A., Kim,E.E., Griffith,J.P.,
            Navia,M.A., Murcko,M.A., Chambers,S.P., Aldape,R.A., Raybuck,S.A.
            et al.
  TITLE     Structure and mechanism of interleukin-1 beta converting enzyme
  JOURNAL   Nature 370 (6487), 270-275 (1994)
   PUBMED   8035875
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012862.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00656.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..337
                     /product="caspase family protein"
                     /GO_function="GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=36253
     Region          1..261
                     /region_name="Raptor_N"
                     /note="Raptor N-terminal CASPase like domain; cl46306"
                     /db_xref="CDD:480646"
ORIGIN      
        1 mpkrpthyal vigindypgy gsrrtlqgav rdatrfkdwl cdttigggld pancelivss
       61 dnpvrpihee idnalerivt aaaaaggpae rlyfyfsghg lsmdthnval clanwsgmrr
      121 haalsshqyl eylkqcspfr evivfldccr irqggvigra selgcavpvd gagakrhlig
      181 yatefgdtaf eapdttddev rghftevlla alsgaaarpa ggvtaaalqe yleknvqlva
      241 kasnhkqiaq vpsdlpghtl fgsakpianc tirfsaarqg qilledpdlt pvhqadvtta
      301 pwtlglrpgl yclteigtgt qynfrfqpvp gfndvtf
//
LOCUS       WP_258124204             582 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258124204
VERSION     WP_258124204.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (residues 1 to 582)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..582
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /calculated_mol_wt=61913
     Region          1..541
                     /region_name="PDC1"
                     /note="TPP-dependent 2-oxoacid decarboxylase, includes
                     indolepyruvate decarboxylase [Carbohydrate transport and
                     metabolism, Coenzyme transport and metabolism, General
                     function prediction only]; COG3961"
                     /db_xref="CDD:443161"
ORIGIN      
        1 mptaadyiie rmaqhnveal fgvpavycap mfaaaararg frtivtasdl eagyaadaya
       61 rvrglsvvsv aygvgtlsli navagayier spmvvinggp tdaniqiqte kgilfshsmg
      121 rphsdleafr pftafcerpa rqtdvpslvd ralvvaltrk hpvyleipqd wlggscprps
      181 gtldlsiphg aeqaiaativ gqikaarkpl lmvgievqrf glassvmsii rkldlnwatt
      241 llarstlpep arpsddprfl gvfngnhapk plrdaitqsd lllslgavfg sgharlmlva
      301 hprtirvwdg lvhipmqtpq pasidhlvae ldrqaltlpl aaqalnsrev evdtgdsevf
      361 saiderawdg drgsdigple ntedrdvpra pianaltyde lfaeigaktf ldrsftvipd
      421 tflgiysaak lkmpsqncfi ssaiwasigh svgagvgaai pgekrplvvc gdggfqmipq
      481 alstmarygl navivivdng lygyeqylla pgyysgssqp lpytvlsrwq yeslarsmgv
      541 gmvasadtva slkkalaaak anvngpaivh aivgsrslpa gl
//
LOCUS       WP_258124247            1165 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Mesorhizobium onobrychidis].
ACCESSION   WP_258124247
VERSION     WP_258124247.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024904.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13514.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1165
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..1165
                     /product="AAA family ATPase"
                     /calculated_mol_wt=129445
     Region          2..>531
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          2..209
                     /region_name="AAA_27"
                     /note="AAA domain; pfam13514"
                     /db_xref="CDD:433272"
     Region          586..1148
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
ORIGIN      
        1 mmrinrldlt rygkftdkhi dfgpvepgrp dlhiiygpne agkstalsaf ldllfgiesr
       61 srydflhpys tmrigaaldi ggvarelvri kkpqssllgp gdqpigehli lgelggverd
      121 vycamfsldd dtleeggksi laskgdlgql lfsastglaa lsqtlvelrs qadglfklra
      181 rsseigdlks rlsdlkerke qidmlathyr qmvetkersl anydeamadr trtqlrldei
      241 knlltalprl aelrdirdvl aelqdipeap pswgnelpal rqedielavk qetakasmae
      301 lekglnaigl ddialtlgqr mdaiselhar fvtaardlpd rrlqlmevdr eianilrlle
      361 rpeddepssl mlgsrisgsi rdlverrsgi datlqnakre aaeanrrlig lrsklsseaa
      421 astnsaavaa larelsalre ndhaarrrva ersrvdlket larqmsellp wgesldqvrq
      481 mrvpapsele awksalskae aeidrysdds grltselrcl raeldalkns tgvvddheaa
      541 tsrsareaaw athrdaldes taaafeielr kddlitsarl ghmsdlakln qtyqrlavae
      601 aelersaell naakskreai rtdildsark maltvsgein lggleawlgr remvlatadl
      661 lreaegdlrq aaadgtaarn rlsaalsaaa vsqdhsdsye allaraqsav dlevehknlr
      721 eqlercereq asrqsaleta aadeaqwdgs waevckscwl gaggtipsla tvkevmdrla
      781 elspaaqrqa gladriakme edqaafsrel almaaelgme rpaesalrfw almsarveea
      841 rlkkaeresk hlaledqilk nrdleaeiav cerrksemtq lfgvsslqea ekklrmieqk
      901 rdlrrrsnii ereirdalsi qdmadaeqml daadrpalea eqvelrarfe dqdrrvrelf
      961 tayskasdev davdgdsava aleeqrrtvl leiedkafsy frlragvvaa eqalrlyrdk
     1021 hrssmmlras eafqvisrga yrglatqpdk dtevligiga dgssklaqem skgtrfqlyl
     1081 alrvagyhef gqsrspvpfi addimetfdd fraeeafrlf admakvgqvi ylthhqhlcd
     1141 iarrvcpnar ihelaaplvl esraa
//
LOCUS       WP_258124296            1004 aa            linear   BCT 02-MAR-2025
DEFINITION  trypsin-like peptidase domain-containing protein [Mesorhizobium
            onobrychidis].
ACCESSION   WP_258124296
VERSION     WP_258124296.1
KEYWORDS    RefSeq.
SOURCE      Mesorhizobium onobrychidis
  ORGANISM  Mesorhizobium onobrychidis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024758.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13365.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Mesorhizobium onobrychidis"
                     /db_xref="taxon:2775404"
     Protein         1..1004
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /calculated_mol_wt=110160
     Region          78..260
                     /region_name="eMpr"
                     /note="V8-like Glu-specific endopeptidase
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG3591"
                     /db_xref="CDD:442810"
     Region          345..617
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(351,384,493,531,533,574,609..610)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     Site            order(384,609)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:197306"
     Site            order(493,533,610)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197306"
ORIGIN      
        1 mvdsapgrap rgipfasatk peqsfadira klpvtspesm qlgwkgvrev gvtferaigr
       61 yvtisatllk vladrrrava riqtdgidfr gdpgawggtg flvapnlflt nnhvlnsdvv
      121 agkalvefdy evgeeallgg tstvspskkv frldprrlfi tspaqdgldy tfvwidssaa
      181 aefgtivler ssftmmegeq afvihhpdgr lkeasvddtd ilkvdsrvvh yssdtdygss
      241 gapvfnrqgn lialhhatse qdltlpnghk skyvnegiki aaialdletk aqssgsdaat
      301 aqevlsairg sdtltgffga lgrrpegand lervvnayts ddadidigfw niehlasryq
      361 egpkleaaaa vladmkldiw glsevspnav ralvkelker fgedygcafs epdagdgkqs
      421 taviwrtavl dgssvewpee vqllfkmrsd npaasefeav hgkifdrypg lfrfvtgkry
      481 gaapvtlhvi plhlkamseg slrrrmasgi lrralevlkr ngiedvilgg dmnatlasgd
      541 lnhlkhagfr pmgaddeqdg aftylkspyk sfidniflsp nlkhtfgdde flvvardrei
      601 gdfvktvsdh rpimirlalr dkpateepag tslgaidvdg lldsiqlhas farrppaalg
      661 lpgkitfeel krmlsdpsip darirpylqv sprdhapfsp ivepnpnkvi mdqidrveve
      721 sainwgnsfc rwrreqrfeq rlkindpkpi llvegdswfq fpllldevvd hldgdfvvrc
      781 lgaagdtadn mihrdpeyar elaaldgrlg kekrkvsafl lsaagndvig adaegnsvll
      841 kllkkyqpkk gasahidpka skavfsylea ayrkviatvh amptyrdlpi lihgydyaip
      901 ggfaedprhp iwaaqdkwlg apmrakgivd pilqreiikl lidrlydmfd kvagnsrvtk
      961 vhmvdargal gpvdswadei hgtsdgfanv asrfkavlnr virl
//
LOCUS       WP_258124381             399 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase [Brucella anthropi].
ACCESSION   WP_258124381
VERSION     WP_258124381.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012744.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00534.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..399
                     /product="glycosyltransferase"
                     /EC_number="2.4.-.-"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=43050
     Region          2..373
                     /region_name="GT4_Bme6-like"
                     /note="Brucella melitensis Bme6 and similar proteins;
                     cd03821"
                     /db_xref="CDD:340848"
     Site            order(16,209..211,275,296)
                     /site_type="other"
                     /note="putative ADP-binding pocket [chemical binding]"
                     /db_xref="CDD:340848"
ORIGIN      
        1 mnivhvigsy dpakggpqav vvrlaaaqat lghevtivsy sddevsgrav satatipgfd
       61 kvctlllpmp dlretlfgga aakamemllr sadfvhlhgi wetnllrasm lcrryrvpyc
      121 vcccgmldvw smqqsawkkk iammlgfrrm ldgaafihal nadeielmrp lglkspsmii
      181 pngiflneve gdkdiavrgl perpyilfls rlhykkgldi ladafrrvat lfpdvdlvva
      241 gpdggaeedf rqrirqygle trvhmtggly gpakiaalkq sacfclpsrq egfsvaitea
      301 lacgvpvait dachfpevae agagvvcsld pmavasaleq iledpdrakr mgaagarlvr
      361 anytwprial qtiaayqsfq sqksgavagr kalrsvpas
//
LOCUS       WP_258124400             308 aa            linear   BCT 02-MAR-2025
DEFINITION  VOC family protein [Brucella anthropi].
ACCESSION   WP_258124400
VERSION     WP_258124400.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 308)
  AUTHORS   Han,S., Eltis,L.D., Timmis,K.N., Muchmore,S.W. and Bolin,J.T.
  TITLE     Crystal structure of the biphenyl-cleaving extradiol dioxygenase
            from a PCB-degrading pseudomonad
  JOURNAL   Science 270 (5238), 976-980 (1995)
   PUBMED   7481800
REFERENCE   2  (residues 1 to 308)
  AUTHORS   Ruetschi,U., Dellsen,A., Sahlin,P., Stenman,G., Rymo,L. and
            Lindstedt,S.
  TITLE     Human 4-hydroxyphenylpyruvate dioxygenase. Primary structure and
            chromosomal localization of the gene
  JOURNAL   Eur J Biochem 213 (3), 1081-1089 (1993)
   PUBMED   8504803
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013098.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00903.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..308
                     /product="VOC family protein"
                     /calculated_mol_wt=34383
     Region          7..130
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
     Region          153..305
                     /region_name="VOC"
                     /note="vicinal oxygen chelate (VOC) family; cl14632"
                     /db_xref="CDD:472697"
ORIGIN      
        1 mlnqikglhh vtslaadars nnrfftdtlg lrrvkktvnf ddpsvyhlyy gdelgtpgtv
       61 mtyfpfpgmp rgrdgtgevg ttvfavpqgs lgfwkdrfeq savkiesede afgekrihfr
      121 gpdgdsfalv evkddprapw ahegidaeha irgfhsvsmr lrdegatsel lkymgyqkld
      181 akdgvtrlim pegngagvid letlpavgrn qqgagsvhhv afavenrekq levrkalmdt
      241 gyhvtpvidr dyfwaiyfrt pggvlfevat nepgfdrded tahlgealkl peqhqhlrgy
      301 leehldri
//
LOCUS       WP_258124353             346 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Brucella anthropi].
ACCESSION   WP_258124353
VERSION     WP_258124353.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 346)
  AUTHORS   Koropatkin,N.M., Pakrasi,H.B. and Smith,T.J.
  TITLE     Atomic structure of a nitrate-binding protein crucial for
            photosynthetic productivity
  JOURNAL   Proc Natl Acad Sci U S A 103 (26), 9820-9825 (2006)
   PUBMED   16777960
REFERENCE   2  (residues 1 to 346)
  AUTHORS   Maeda,S., Price,G.D., Badger,M.R., Enomoto,C. and Omata,T.
  TITLE     Bicarbonate binding activity of the CmpA protein of the
            cyanobacterium Synechococcus sp. strain PCC 7942 involved in active
            transport of bicarbonate
  JOURNAL   J Biol Chem 275 (27), 20551-20555 (2000)
   PUBMED   10779519
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024772.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13379.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..346
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=36639
     Region          39..261
                     /region_name="PBP2_Cae31940"
                     /note="Substrate binding domain of an uncharacterized
                     protein similar to ABC-type transporter for thiamin
                     biosynthetic pathway intermediates; a member of the type 2
                     periplasmic binding fold superfamily; cd13649"
                     /db_xref="CDD:270367"
     Site            order(46,78,123,149,155,198..199,202,235)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:270367"
ORIGIN      
        1 mrttrrdill gaaafgfagi asrlpayaqd asatpekpel mfgvggkplf yylpltiaer
       61 kgffeeegik atindfggga kslqaliggs vdvvtgayeh tirmqnkgqd ikavcelgrf
      121 pgicigvrkd lageiktiad lkgqnvgvta pgsstslllq yaliknglaa daasiigvgg
      181 gasavaavkk geiaalvhld pvitrlevdg ditllldtrt eegtrqlfgg tnpaatvyvq
      241 qsfidanpvt tqrvvnafvk slnwihkasa devadavpee yllgdrelyk tgfeksramy
      301 sekgliaedg fkslfemlka ldpelasadi sfaqtfdprf veaaka
//
LOCUS       WP_258124535             410 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Brucella anthropi].
ACCESSION   WP_258124535
VERSION     WP_258124535.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..410
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=42689
     Region          17..386
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(24..25,28..29,32,64,118..119,121..123,126,146,
                     149..150,153,222,225..226,229..231,234,256,260,314..315,
                     319,323,339,342..343,346..347,350)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340863"
ORIGIN      
        1 msnpyreifs apgaigfsaa affarlpiam apvgivamla qthgeywlag avsatfaltn
       61 afiapqisrl vdrygqsriv mpatvvsvia fafllvatnq gwanwtlfvs affagampsi
      121 pamvrarwte ifrnrpelnt afafesaade lvyisgasls valavslfpe agmlistafl
      181 avgtiafllq rsseppvral dqdspqrsai wsrpvqiitl alifvgstfa taevsavait
      241 selgqpgaas lvigvyaigs flvgitlgal slrmplqrql miavsvlalt alplpfagts
      301 ttllavavfv sgvaisptfi tafglierrv petmltegit wvmtgigigm afgafvsgwv
      361 vdnfgaangf wvsvvaslsa vatvalgqvs lsgtreaaec dalcvaeaae
//
LOCUS       WP_258124491             378 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease [Brucella anthropi].
ACCESSION   WP_258124491
VERSION     WP_258124491.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 378)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024110.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12698.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..378
                     /product="ABC transporter permease"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=41283
     Region          <2..372
                     /region_name="ABC2_perm_RbbA"
                     /note="ribosome-associated ATPase/putative transporter
                     RbbA; NF033858"
                     /db_xref="CDD:468210"
ORIGIN      
        1 msgwfsferl gamlvkefiq mrrdritfam mlvvplmqll lfgfainndp kslpsalvvt
       61 sqdhytrami salettgyyr fdhvvqsaae aealiadgtv sfvvtipsdf arrvdageqp
      121 qilieadatd psvasgaist lgtvasqall reqgkqaeaa daarsqlqvv vhrrynpegv
      181 sqynivpgll gvilqmtmvm mtamaltret ergtmenlla mpatpaeiml gkvlpflvvg
      241 gvqvvvvlva akllfgvpfv gslallltcv lifvlslvll gytistasrt qmqamqltff
      301 fflpslmlsg fmfpfrgmpd waqalgeifp lthflrivra vmlkgahlsd iagevnalif
      361 fvflfaslal lrfrrtld
//
LOCUS       WP_258124486             340 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein [Brucella anthropi].
ACCESSION   WP_258124486
VERSION     WP_258124486.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 340)
  AUTHORS   Swint-Kruse,L. and Matthews,K.S.
  TITLE     Allostery in the LacI/GalR family: variations on a theme
  JOURNAL   Curr Opin Microbiol 12 (2), 129-137 (2009)
   PUBMED   19269243
REFERENCE   2  (residues 1 to 340)
  AUTHORS   Fukami-Kobayashi,K., Tateno,Y. and Nishikawa,K.
  TITLE     Parallel evolution of ligand specificity between LacI/GalR family
            repressors and periplasmic sugar-binding proteins
  JOURNAL   Mol Biol Evol 20 (2), 267-277 (2003)
   PUBMED   12598694
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13377.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..340
                     /product="substrate-binding domain-containing protein"
                     /calculated_mol_wt=37813
     Region          1..64
                     /region_name="HTH_XRE"
                     /note="Helix-turn-helix XRE-family like proteins.
                     Prokaryotic DNA binding proteins belonging to the
                     xenobiotic response element family of transcriptional
                     regulators; cl22854"
                     /db_xref="CDD:473980"
     Site            order(4,12..16,18..19,22,27..28,31,44,47,50..51,53..54)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143331"
     Site            44..53
                     /site_type="active"
                     /note="domain linker motif [active]"
                     /db_xref="CDD:143331"
     Region          60..328
                     /region_name="PBP1_AglR-like"
                     /note="Ligand-binding domain of DNA transcription
                     repressor specific for alpha-glucosides (AglR) and similar
                     proteins; cd20010"
                     /db_xref="CDD:380665"
     Site            order(65,74..75,77..79,82,90..93,95,116,223,226,248,255)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:380665"
     Site            order(72,76,144..145,156..159,195,246,274)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:380665"
ORIGIN      
        1 mklrefakhl glsattvsra lsgypevaes trkrvmdeav rlgyrpnvna vrlvtgraga
       61 igvvmgrnse fhfaefmrgm aerlsqdevd ilvspianyg tddevqlcrr latshrvdai
      121 ivtspkpnde rirmlhelgm pflvhgrset diphawldid negavyrsta hlldlghrri
      181 amingrygft fslhrdegyr kalesrgiaf dpelvehgdf tdeigyrlar kllerdprpt
      241 afvagsmmta lgiyraarsf gltigkdisv iahddvisfl sadnmvpslt atrssmraag
      301 krcadllmdi ldgraatdih elwpvelilr esatrvpewa
//
LOCUS       WP_258124735             439 aa            linear   BCT 02-MAR-2025
DEFINITION  phage minor head protein [Escherichia coli].
ACCESSION   WP_258124735
VERSION     WP_258124735.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 439)
  AUTHORS   Vinga,I., Droge,A., Stiege,A.C., Lurz,R., Santos,M.A.,
            Daugelavicius,R. and Tavares,P.
  TITLE     The minor capsid protein gp7 of bacteriophage SPP1 is required for
            efficient infection of Bacillus subtilis
  JOURNAL   Mol Microbiol 61 (6), 1609-1621 (2006)
   PUBMED   16899078
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016148.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04233.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..439
                     /product="phage minor head protein"
                     /calculated_mol_wt=49418
     Region          6..225
                     /region_name="COG2369"
                     /note="Uncharacterized protein, contains phage Mu head
                     morphogenesis gpF-like domain [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:441936"
     Region          349..428
                     /region_name="MuF_C"
                     /note="Phage MuF-C-terminal domain; pfam18819"
                     /db_xref="CDD:436762"
ORIGIN      
        1 mpqqtidlay aarlppkeav ayfrakgyni twnwyeqlad aharaftvak atrmdvltti
       61 reeveravse gitreeftrt laprlqklgw wgkqiivdae gnakeielgs prrlatiynv
      121 ntrtaygagr yaqmmntadl ypywqyvavm dgrtrpehar lhnmvfrydd ifwqthyppn
      181 gwncrcrvra lsaarmkepg lqvsygasfm ntrevdagtd estgeifrts sttfdngrvk
      241 mtpdvgwsyn pssaafgtdq alirklveih daqlreqvvq tlnnsrerql afslwlkrla
      301 ksrragheir algfmtgsva kavyqrtgnm parllvmngk slattadaal kpedlqrlps
      361 lmakpqavlw drenhqllyv vatrdgmari vvrtsqtvgr qndradvlvs isrvsaqsle
      421 aaiadgmidv leghvevnk
//
LOCUS       WP_258124371             501 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6212 domain-containing protein [Brucella anthropi].
ACCESSION   WP_258124371
VERSION     WP_258124371.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 501)
  AUTHORS   Becker,A., Ruberg,S., Kuster,H., Roxlau,A.A., Keller,M.,
            Ivashina,T., Cheng,H.P., Walker,G.C. and Puhler,A.
  TITLE     The 32-kilobase exp gene cluster of Rhizobium meliloti directing
            the biosynthesis of galactoglucan: genetic organization and
            properties of the encoded gene products
  JOURNAL   J Bacteriol 179 (4), 1375-1384 (1997)
   PUBMED   9023225
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040354.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19717.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..501
                     /product="DUF6212 domain-containing protein"
                     /calculated_mol_wt=55319
     Region          64..463
                     /region_name="DUF6212"
                     /note="Family of unknown function (DUF6212); pfam19717"
                     /db_xref="CDD:437549"
ORIGIN      
        1 mlstplpais arksrryaia smrdrealea tslgglttfv egdgkrlrla ntfpliaiaa
       61 sqegedelkt vlqqvyrlst ipelpvvrid dataetvpll vtqllessld rlvghvskvh
      121 telamlrrer etmfenyrai edafharnwd ssteifshap lvdpkdegfa rllreseieq
      181 lfpvssyavs gfalhfrelp anrngqlivt ldylengegi aewlvpygal hsewnffslp
      241 kacdgshrtl rlrisasggv ppelslgnvi aneryaarar iphadldmrp lalriftglp
      301 gvrpaslpna ivptalingr kvddyrlpve llrnvanvsv tpitpdfptv rflehedaig
      361 chpledgvta aairrvvapg tvrvsaravi dhpegqpcav glllvnlasd vkeeidaiss
      421 ldrrrqqvlf sgwsevapnh pidinfmlee pidrtmdlvv lskaaagsvd fswlkvfnfr
      481 lvkhiearps qeitkeaanv r
//
LOCUS       WP_258124772             152 aa            linear   BCT 02-MAR-2025
DEFINITION  DDE-type integrase/transposase/recombinase, partial [Brucella
            anthropi].
ACCESSION   WP_258124772
VERSION     WP_258124772.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 152)
  AUTHORS   Dyda,F., Hickman,A.B., Jenkins,T.M., Engelman,A., Craigie,R. and
            Davies,D.R.
  TITLE     Crystal structure of the catalytic domain of HIV-1 integrase:
            similarity to other polynucleotidyl transferases
  JOURNAL   Science 266 (5193), 1981-1986 (1994)
   PUBMED   7801124
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012870.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00665.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         <1..152
                     /product="DDE-type integrase/transposase/recombinase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <1..141
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 pmargfvylc avvdwfsrkv lswrlsitme aafcieavee alarygrpdi fntdqgsqft
       61 smdfttvlkk aeiaismdgk gawrdnvfve rlwrsikyee vylhayktvs earagigryl
      121 tfynsrrphs sldrqtpdqa yfnaltpmma aa
//
LOCUS       WP_258124844             659 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing
            protein [Brucella anthropi].
ACCESSION   WP_258124844
VERSION     WP_258124844.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 659)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02737.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..659
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /GO_function="GO:0070403 - NAD+ binding [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=69448
     Region          17..648
                     /region_name="fadJ"
                     /note="fatty acid oxidation complex subunit alpha FadJ;
                     PRK11154"
                     /db_xref="CDD:236864"
ORIGIN      
        1 madrrefspv vtgmvvdgil vvtidnppvn atsaevrkgl aaaihhasat aairatvlsg
       61 agkifiggad irefgkppve ptlpdvitii enadkpvvaa ingpalgggl evalvahari
      121 astsasfalp evklgivpga ggtqrlprli gslaaldmia mgrqiapdea qqlglinris
      181 dgdlvtdaia lahalvgkpl rrtgdlpvta pdaatfeqak akilkkarga tapgeaarlv
      241 qlsttisiae glaeeratfi rlrdseeaaa lrhlffaera agkvegmeak plalstigia
      301 gtglmgsgia vaclaagytv igyettaeaa akgharisdm iqkavdtgrl steaadaqra
      361 klsvsadmaa ladadlviea vfddftvkas lfreldallp patilatnts ylnpdelaav
      421 tnrtdrvlgl hffspanimr llevvrcaet sdetlatgia farkikklpi vtgvcegfig
      481 nrmfsayrte aekmlaegay pedidramea ygfpmglfav ydmagleiaw arrkraaasr
      541 dpnlpyfdva dklceagrfg ckaglgwyry adgvrtsdpd vhaliddyra rnaivprsfs
      601 deaimqrlla amayegeall eegiarhsdd idlvlvngys fpsikggplf atrqtgetr
//
LOCUS       WP_258124895             159 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6878 family protein [Brucella anthropi].
ACCESSION   WP_258124895
VERSION     WP_258124895.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF044572.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21798.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..159
                     /product="DUF6878 family protein"
                     /calculated_mol_wt=17271
ORIGIN      
        1 msetsdttpq htpplsewet laaartqlet elfvlnkael lnalalagvt hvvvtfdgyg
       61 dsgqiedvqv ragdddltmp savielceav wgepepkrss vsiatavesl aydvlerchg
      121 gwenndgayg ditfdvaart itldyneryt asenythnf
//
LOCUS       WP_258124847             270 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Brucella anthropi].
ACCESSION   WP_258124847
VERSION     WP_258124847.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 270)
  AUTHORS   Maqbool,A., Horler,R.S., Muller,A., Wilkinson,A.J., Wilson,K.S. and
            Thomas,G.H.
  TITLE     The substrate-binding protein in bacterial ABC transporters:
            dissecting roles in the evolution of substrate specificity
  JOURNAL   Biochem Soc Trans 43 (5), 1011-1017 (2015)
   PUBMED   26517916
REFERENCE   2  (residues 1 to 270)
  AUTHORS   Wilkens,S.
  TITLE     Structure and mechanism of ABC transporters
  JOURNAL   F1000Prime Rep 7, 14 (2015)
   PUBMED   25750732
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 270)
  AUTHORS   ter Beek,J., Guskov,A. and Slotboom,D.J.
  TITLE     Structural diversity of ABC transporters
  JOURNAL   J Gen Physiol 143 (4), 419-435 (2014)
   PUBMED   24638992
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10194221
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..270
                     /product="ABC transporter substrate-binding protein"
                     /GO_component="GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=28595
     Region          35..250
                     /region_name="PBP2_peptides_like"
                     /note="Peptide-binding protein and related homologs; type
                     2 periplasmic binding protein fold; cd13530"
                     /db_xref="CDD:270248"
ORIGIN      
        1 mmicrrnfla maglasalaa ssfamtsasl aadalnigay psnppfelkn adgtfegfei
       61 diateaakra glepeiadyg fqalfaatts rridvavssi titperlksq sftqpyydsd
      121 igvatktdsa vtgladlkgk tvgalsgstg ekwvkenkea kgfvdikgyn sqqdlfldlg
      181 agridavisd ipgmehlflk mkgfavkdri qtgeqyglmm akdhpllgkl ndaitamkqd
      241 gttaaihkkw fgtepaasss tvtvvpipkp
//
LOCUS       WP_258124950             183 aa            linear   BCT 02-MAR-2025
DEFINITION  chemotaxis protein CheW [Brucella anthropi].
ACCESSION   WP_258124950
VERSION     WP_258124950.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 183)
  AUTHORS   Bilwes,A.M., Alex,L.A., Crane,B.R. and Simon,M.I.
  TITLE     Structure of CheA, a signal-transducing histidine kinase
  JOURNAL   Cell 96 (1), 131-141 (1999)
   PUBMED   9989504
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013731.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01584.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..183
                     /product="chemotaxis protein CheW"
                     /GO_process="GO:0006935 - chemotaxis [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=19396
     Region          14..149
                     /region_name="CheW_like"
                     /note="CheW-like domain. CheW proteins are part of the
                     chemotaxis signalling mechanism in bacteria. CheW
                     interacts with the methyl accepting chemotaxis proteins
                     (MCPs) and relays signals to CheY, which affects flageller
                     rotation. This family includes CheW and...; cl00256"
                     /db_xref="CDD:469692"
ORIGIN      
        1 mtqaletpdt tdaseglvsv kvgsqsfgip vlqvqdviap tainrvplap pevagslnlr
       61 grivtaidmr krlgmppkas ddgsmsvivd rhgelyallv ddvgdvlwlp asrhealpst
      121 lsqdwrslcs glyrleaell lvlrieevlv lnrqgaaigl aprvdrtggq sdelvggeaa
      181 qar
//
LOCUS       WP_258124951             974 aa            linear   BCT 02-MAR-2025
DEFINITION  chemotaxis protein CheW [Brucella anthropi].
ACCESSION   WP_258124951
VERSION     WP_258124951.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 974)
  AUTHORS   Bilwes,A.M., Alex,L.A., Crane,B.R. and Simon,M.I.
  TITLE     Structure of CheA, a signal-transducing histidine kinase
  JOURNAL   Cell 96 (1), 131-141 (1999)
   PUBMED   9989504
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013731.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01584.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..974
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..974
                     /product="chemotaxis protein CheW"
                     /GO_process="GO:0006935 - chemotaxis [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=102193
     Region          1..692
                     /region_name="CheA"
                     /note="Chemotaxis protein histidine kinase CheA [Signal
                     transduction mechanisms]; COG0643"
                     /db_xref="CDD:440408"
     Region          709..>797
                     /region_name="CheW"
                     /note="CheW-like domain; pfam01584"
                     /db_xref="CDD:460257"
     Region          858..>913
                     /region_name="CheY"
                     /note="CheY-like REC (receiver) domain, includes
                     chemotaxis protein CheY and sporulation regulator Spo0F
                     [Signal transduction mechanisms]; COG0784"
                     /db_xref="CDD:440547"
     Region          860..>968
                     /region_name="RpfG"
                     /note="Response regulator c-di-GMP phosphodiesterase, RpfG
                     family, contains REC and HD-GYP domains [Signal
                     transduction mechanisms]; COG3437"
                     /db_xref="CDD:442663"
ORIGIN      
        1 mddlvvdfia etregleald selvrfeqrp ddpatlggif rlvhtikgtc gflgltrlqt
       61 vahhaenvlg gfrdgqlavt pdavtvvlet vdlirslvda lasdgaepag ddsaliarle
      121 qvqeppsaap akkkaaggrg gkaaatpali erlggdalld aavemalprl releplqaal
      181 adgdldyqqg alrdalstla rkqtptgafq ralealgvas pdstalsaay gliaeglaal
      241 daddsaiaql gvlagapida apvsgpattp tpltktppap vaaeaadaga prseagvtqs
      301 irvsvdaleh lmtvaselvl irnqliqtlr lepespfaap lnrlnqvtse lqegvmttrm
      361 qpisgawakl prlvrdlaqd lgktvdlamt gqeteldrqv lelikdplth mirnaadhgl
      421 etpderraag kppagrislh arheggaili dvaddgrgls aekirakala sglitasqad
      481 qmseaevcql iflagfstaa qvtsvsgrgv gmdvvrtnie kiggtievss vegagtrfii
      541 ripltltivs aliveccger falpqsslve lvrasgatgh aieqiegaav lrlrdrllpl
      601 vslqqllkle eapeptgetc ivvarvgaft fgvivdrvfd teeivvkpva tvlrhvklys
      661 gatilgdgsv vlildpkgms teagagqsaa amdavadrnt ataenrkall vfraadealk
      721 aaplaevsri eeikpeqiey ingrtvlqyr grlmpilgid akaagrwteg ggrpllvfvr
      781 gdqaigllvd eivdtveatv afdlasaaeg algslivaeq atelididfy wrraitdgrt
      841 apaaesavpq asaaqpiark srrlllidds sfaelllqpl lsqagyevvv assadqalel
      901 yhagekfhli mvdapsdrdq arafaraliq akdwartpml smalggvagq aappqrstll
      961 aaveealepl rgaa
//
LOCUS       WP_258124965             160 aa            linear   BCT 02-MAR-2025
DEFINITION  pyridoxal-dependent decarboxylase, partial [Escherichia coli].
ACCESSION   WP_258124965
VERSION     WP_258124965.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 160)
  AUTHORS   Viguera,E., Trelles,O., Urdiales,J.L., Mates,J.M. and
            Sanchez-Jimenez,F.
  TITLE     Mammalian L-amino acid decarboxylases producing 1,4-diamines:
            analogies among differences
  JOURNAL   Trends Biochem Sci 19 (8), 318-319 (1994)
   PUBMED   7940675
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012503.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00282.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>160
                     /product="pyridoxal-dependent decarboxylase"
                     /GO_function="GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA]"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0019752 - carboxylic acid metabolic
                     process [Evidence IEA]"
     Region          <1..>160
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            146
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99743"
ORIGIN      
        1 mlggmamkwr wrkrmeaagk ptnkpnlvcg pvqicwhkfa rywdvelrei pmrpgqlfmd
       61 pkrmieacde ntigvvptfg vtytgnyefp qplhdaldkf qadtgididm hidaasggfl
      121 apfvapdivw dfrlprvksi sasghkfgla plgcgwviwr
//
LOCUS       WP_258125045             176 aa            linear   BCT 02-MAR-2025
DEFINITION  Ail/Lom family outer membrane beta-barrel protein, partial
            [Escherichia coli].
ACCESSION   WP_258125045
VERSION     WP_258125045.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 176)
  AUTHORS   Miller,V.L., Beer,K.B., Heusipp,G., Young,B.M. and Wachtel,M.R.
  TITLE     Identification of regions of Ail required for the invasion and
            serum resistance phenotypes
  JOURNAL   Mol Microbiol 41 (5), 1053-1062 (2001)
   PUBMED   11555286
REFERENCE   2  (residues 1 to 176)
  AUTHORS   Barondess,J.J. and Beckwith,J.
  TITLE     A bacterial virulence determinant encoded by lysogenic coliphage
            lambda
  JOURNAL   Nature 346 (6287), 871-874 (1990)
   PUBMED   2144037
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06316.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>176
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /GO_component="GO:0044384 - host outer membrane [Evidence
                     IEA]"
     Region          1..176
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mrklyaails aaiclavsga pawasehqst lsagylhvst nvpgsddlng invkyryeft
       61 dtlglvtsfs yagdknrqlt rysdtrwhed svrnrwfsvm agpsvrvnew fsayamagma
      121 ysrvstfsgd ylrvtdnkgk thdvltgsdd drhsntslaw gagvqfnpte svaidi
//
LOCUS       WP_258125079             167 aa            linear   BCT 02-MAR-2025
DEFINITION  zinc-binding dehydrogenase [Brucella anthropi].
ACCESSION   WP_258125079
VERSION     WP_258125079.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024989.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13602.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..167
                     /product="zinc-binding dehydrogenase"
                     /calculated_mol_wt=17361
     Region          <3..167
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
ORIGIN      
        1 mrhvngtkst samrnsased radgaafver gaddrhqfrf ivspedgtdg lgvdyaidgi
       61 ggdmlsksla ctrrfgmvas igqvagpipp iavedigpir slsfarpsvm ayaadptiyp
      121 qaaaallefm rlditadvgg eyaftdapqa qagleagrtt gsllllp
//
LOCUS       WP_258125095            1440 aa            linear   BCT 02-MAR-2025
DEFINITION  strawberry notch-like NTP hydrolase domain-containing protein
            [Brucella anthropi].
ACCESSION   WP_258125095
VERSION     WP_258125095.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025241.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13872.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1440
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..1440
                     /product="strawberry notch-like NTP hydrolase
                     domain-containing protein"
                     /calculated_mol_wt=156374
     Region          97..>232
                     /region_name="COG2263"
                     /note="Predicted RNA methylase [General function
                     prediction only]"
                     /db_xref="CDD:441864"
     Region          414..733
                     /region_name="AAA_34"
                     /note="P-loop containing NTP hydrolase pore-1; pfam13872"
                     /db_xref="CDD:464010"
     Region          904..1161
                     /region_name="Helicase_C_4"
                     /note="C-terminal domain on Strawberry notch homolog;
                     pfam13871"
                     /db_xref="CDD:464009"
ORIGIN      
        1 mnmvfpvadp vtplaaapai laaanlllps lergeridaa tlrrametaf gasdatgvwd
       61 wklayeacev atvlflrkyg kalfrkaasp aarisvlaki aallptqtrr seesqnlqqf
      121 stpiplglta ltaaaitpdd rvlepsagtg llailaqtig gslilnelae tradllaqif
      181 pafavtrfda aqiddhlapd avpsvvlmnp pfsvmanvsg rvadaayrhv aaalarlapg
      241 grlvtitgag fgpeapawrd afirlqargr vvfsaavdga vyakhgttid trltvidklp
      301 addpaslpas pgiapdvatl irwieeqvpp rlpvslpkiv vsasatapkt vrgylarsav
      361 trsvaasand pdgvelayet vdwtppegar lsdaiyeeya lqslriagaq phptklvqsa
      421 amasvappkp syrpmlppdi carlsdaqle tviyageaha dhlagawtvd ehfdnvsaap
      481 edaagsirfr rgfmlgdgtg agkgrqsaai ildnwlrgrr kaiwisksdk liedaqrdws
      541 algmerllvt plsrfpqgkp itlsegilft tyatlrsddr gekvsrvkqi vewlgsdfdg
      601 aiifdeshsm qnagggkger gdvaasqqgr aglrlqhalp darvvyvsat gattvhnlay
      661 aqrlglwgge dfpfqtraef veaiesggva amevlardlr slglytarsl sydgveyeli
      721 ehqltdeqrh iydsyaaafa vihgnldaam eaanitgsdg tlnrqaksaa rsafestkqr
      781 ffghlltsmk tptlirsiea dleaghaavi qivstgealm errlseipte ewndisvdvt
      841 preyvgsylh hsfpvqlyep ftdgegnlss rpvfrdgqpv ecreavarrd emleqlgslp
      901 pvpsaldqiv qrfgtdmvae vtgrsrrivr kgegasarla venrapsanl vetsafmddq
      961 krilvfsdag gtgrsyhael sarnqrlrvh yllepgwkad aaiqglgrtn rtnqaqpplf
     1021 rpiatdvkae krflstiarr ldtlgaitrg qrqtggqglf rpednlesay ardalrqlyl
     1081 livrgkvegc slerfesatg lklmdsngvk delppittfl nrllaltiel qgilfsafeq
     1141 llqaridgai asgtydmgle tlkaesfivt drqvihthpg tgaetrlltl terkrnqpva
     1201 ldaalaeldd prarlliner sgraavqipt tsvmlddgei errvrlirpm eamnipvram
     1261 gethwieadr aafnaawkae laevpeytds ilhmvtglll piwkrlpqds sriyrlqtde
     1321 geriigrrvs pawtanapts gvtssltpda ayaaliegrt ildlaeglql rrvrvmganr
     1381 ieltgftdam rdrlrayglf seiiswklrf fvpvdatgpa iisklldlfp alrigereaa
//
LOCUS       WP_258125090              72 aa            linear   BCT 02-MAR-2025
DEFINITION  transcriptional regulator domain-containing protein [Brucella
            anthropi].
ACCESSION   WP_258125090
VERSION     WP_258125090.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 72)
  AUTHORS   Jowsey,W.J., Morris,C.R.P., Hall,D.A., Sullivan,J.T.,
            Fagerlund,R.D., Eto,K.Y., Solomon,P.D., Mackay,J.P., Bond,C.S.,
            Ramsay,J.P. and Ronson,C.W.
  TITLE     DUF2285 is a novel helix-turn-helix domain variant that
            orchestrates both activation and antiactivation of conjugative
            element transfer in proteobacteria
  JOURNAL   Nucleic Acids Res 51 (13), 6841-6856 (2023)
   PUBMED   37246713
REFERENCE   2  (residues 1 to 72)
  AUTHORS   Knittel,V., Sadana,P., Seekircher,S., Stolle,A.S., Korner,B.,
            Volk,M., Jeffries,C.M., Svergun,D.I., Heroven,A.K., Scrima,A. and
            Dersch,P.
  TITLE     RovC - a novel type of hexameric transcriptional activator
            promoting type VI secretion gene expression
  JOURNAL   PLoS Pathog 16 (9), e1008552 (2020)
   PUBMED   32966346
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040446.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20109.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..72
                     /product="transcriptional regulator domain-containing
                     protein"
                     /calculated_mol_wt=8635
     Region          2..60
                     /region_name="DUF6499"
                     /note="Family of unknown function (DUF6499); pfam20109"
                     /db_xref="CDD:437941"
ORIGIN      
        1 mqsidwrtpa aykrikdlpp agfaweylrr nedyrrever ltqrrepage evdafasrwg
       61 vrfrtrprrr aa
//
LOCUS       WP_258125145             694 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: carboxy terminal-processing peptidase [Brucella].
ACCESSION   WP_258125145
VERSION     WP_258125145.1
KEYWORDS    RefSeq.
SOURCE      Brucella
  ORGANISM  Brucella
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023246.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11818.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Brucella"
                     /db_xref="taxon:234"
     Protein         1..694
                     /product="carboxy terminal-processing peptidase"
                     /EC_number="3.4.21.102"
                     /calculated_mol_wt=76731
     Region          6..693
                     /region_name="PRK11186"
                     /note="carboxy terminal-processing peptidase"
                     /db_xref="CDD:236873"
ORIGIN      
        1 mehslkriki glvwlflagi ssahalevss pailkpspeq mqaanltaef ltrfhyrpip
       61 lddalsirim nrfidsldpd rliflqadvd kfltgskeid daierqdltv pfsifntyqm
      121 riiermtfar sllkqgfdfs kqedfsivrd kepwprssee sndlwrkrvk ndwlrlklag
      181 kddatirktl dkryensier tfkynsndaf qsfmaaytts vdphtdyfga kasaefdism
      241 klslvgigav lqerddytti relvaggpaq ssgklavgdr ivgvgqgkeg pikevigmrl
      301 devvqmirgd kgsvvrldil pvdagpdgkh hvislvrdki sldkqaaqkk ilsvkdgdas
      361 rkigvitlpa fyediearrk gdknyrsasr dvakliaelk qdkvdgvlvd lrnngggsls
      421 eaidltglfv gkgpvvqqrn asgevkvesd tlsapawkgp lgvlinrgsa saseifaaai
      481 qdygrgvvig epsfgkgtvq tvvnldevan npkpeygelk ftvaqffrvd ggttqlrgvt
      541 pdislpglfd lklvgessfd nalpwsqvka akykssdnik tllprlqklh dervqkslef
      601 qdflqdvatl keqrektsis lneterrnem aaqekrikar gkvndgidtg mddglqsner
      661 slsadlaiek nrksatdvlq neaaaivgdl vdlr
//
LOCUS       WP_258125198             645 aa            linear   BCT 02-MAR-2025
DEFINITION  YadA-like family protein [Brucella anthropi].
ACCESSION   WP_258125198
VERSION     WP_258125198.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 645)
  AUTHORS   Sandt,C.H. and Hill,C.W.
  TITLE     Nonimmune binding of human immunoglobulin A (IgA) and IgG Fc by
            distinct sequence segments of the EibF cell surface protein of
            Escherichia coli
  JOURNAL   Infect Immun 69 (12), 7293-7303 (2001)
   PUBMED   11705900
REFERENCE   2  (residues 1 to 645)
  AUTHORS   Hoiczyk,E., Roggenkamp,A., Reichenbecher,M., Lupas,A. and
            Heesemann,J.
  TITLE     Structure and sequence analysis of Yersinia YadA and Moraxella
            UspAs reveal a novel class of adhesins
  JOURNAL   EMBO J 19 (22), 5989-5999 (2000)
   PUBMED   11080146
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015831.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03895.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..645
                     /product="YadA-like family protein"
                     /calculated_mol_wt=67623
     Region          <136..371
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          403..644
                     /region_name="VOMP_auto_Cterm"
                     /note="Vomp family autotransporter C-terminal domain;
                     NF033870"
                     /db_xref="CDD:411434"
ORIGIN      
        1 msyqstlrlk llststasll fgltlapgpv saapvvngts gcvmgdgkaa agsgtilgpg
       61 ggdsvtwgav cgggfignqi ppgayngwvq gnfvsaaein gafqqqenyi nsvvnqartd
      121 ltnyidqrvn navpdlsaih aknaeqdnrl nandtknnqq dtrlnnaegr lntaesrlgn
      181 vetkntqqdt rldgvdnrla dndqknaaqd atladhenrv tegekknaeq dakltdhedr
      241 isageqknae qdarldehdr lladhedrit egekknaeqd akladhegri tetekknaeq
      301 dvvladhegr itetekknae qdvvladheg riteteknik dvsdnavfyd rdangnktgg
      361 ltlndgtgke vqlgnvaagk agtdatnvdq lsgaldglgg gakvnddgsv tgpkynvggv
      421 dynnvgdalk atnklgvqyv adengnptnt vvltgngtgp vkitnvadgt adsdavnygq
      481 vkdnisydrn sdgsrsnsit ltgggagpvs ihnladgkad sdaanvrqvn karqdsfdyt
      541 dqriselaid ssaqfaalsg eisktrtelr agvasamama slkfddrpgk asiagsiggf
      601 kgstsiatgf gytsedgnwr inagiahsfa tndtswnaga sftln
//
LOCUS       WP_258125252              59 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein, partial [Brucella
            anthropi].
ACCESSION   WP_258125252
VERSION     WP_258125252.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024242.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12833.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..59
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         <1..59
                     /product="helix-turn-helix domain-containing protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
     Region          <1..57
                     /region_name="HTH_ARAC"
                     /note="helix_turn_helix, arabinose operon control protein;
                     smart00342"
                     /db_xref="CDD:197666"
ORIGIN      
        1 ipplryasel rmrlasqwln rdrlaidtva hklgytsqaa fsrafkrvtg rppgasrqf
//
LOCUS       WP_258125331             120 aa            linear   BCT 02-MAR-2025
DEFINITION  DDE-type integrase/transposase/recombinase, partial [Brucella
            anthropi].
ACCESSION   WP_258125331
VERSION     WP_258125331.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 120)
  AUTHORS   Dyda,F., Hickman,A.B., Jenkins,T.M., Engelman,A., Craigie,R. and
            Davies,D.R.
  TITLE     Crystal structure of the catalytic domain of HIV-1 integrase:
            similarity to other polynucleotidyl transferases
  JOURNAL   Science 266 (5193), 1981-1986 (1994)
   PUBMED   7801124
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012870.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00665.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         <1..>120
                     /product="DDE-type integrase/transposase/recombinase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <1..120
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 pmargfvylc avvdwfsrrv lswrlsitme adfcieavee alarygkpdi fntdqgsqft
       61 sidftavlkk aeiaismdgk gawrdnvfve rlwrsikyee vylhayktvs earagigryl
//
LOCUS       WP_258125439             182 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrB/UvrC motif-containing protein [Bacillus sp. IBL03825].
ACCESSION   WP_258125439
VERSION     WP_258125439.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. IBL03825
  ORGANISM  Bacillus sp. IBL03825
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014232.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02151.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Bacillus sp. IBL03825"
                     /db_xref="taxon:2953580"
     Protein         1..182
                     /product="UvrB/UvrC motif-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=20721
     Region          1..180
                     /region_name="McsA"
                     /note="Protein-arginine kinase activator protein McsA
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG3880"
                     /db_xref="CDD:443088"
ORIGIN      
        1 mtcqncnirp atlhytkvin eqkaevhlce qcaeqsgyts ffqspqsnfs fhdlfaglly
       61 gestmfeegq nglsntsilr cpdckmtseq ftkvgrfgca scydtfkghl kpllkrlhgg
      121 htdhcgkipe riegnlhlkk eldelklilk qyvqkeefek aaevrdkirg lenqfsehre
      181 ge
//
LOCUS       WP_258125262              71 aa            linear   BCT 02-MAR-2025
DEFINITION  plasmid partition protein ParG [Brucella anthropi].
ACCESSION   WP_258125262
VERSION     WP_258125262.1
KEYWORDS    RefSeq.
SOURCE      Brucella anthropi (Ochrobactrum anthropi)
  ORGANISM  Brucella anthropi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group;
            Brucella.
REFERENCE   1  (residues 1 to 71)
  AUTHORS   Golovanov,A.P., Barilla,D., Golovanova,M., Hayes,F. and Lian,L.Y.
  TITLE     ParG, a protein required for active partition of bacterial
            plasmids, has a dimeric ribbon-helix-helix structure
  JOURNAL   Mol Microbiol 50 (4), 1141-1153 (2003)
   PUBMED   14622405
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020835.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09274.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Brucella anthropi"
                     /db_xref="taxon:529"
     Protein         1..71
                     /product="plasmid partition protein ParG"
                     /calculated_mol_wt=7835
     Region          <30..71
                     /region_name="ParG"
                     /note="pfam09274"
                     /db_xref="CDD:117819"
ORIGIN      
        1 mseekrgmls agrpsnvrka atlaslsdkg ptvrvnfdld reehkrlklm aveqgrtvte
       61 ilrelvsqsl k
//
LOCUS       WP_258125444             140 aa            linear   BCT 02-MAR-2025
DEFINITION  Mor transcription activator family protein [Escherichia coli].
ACCESSION   WP_258125444
VERSION     WP_258125444.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 140)
  AUTHORS   Kumaraswami,M., Howe,M.M. and Park,H.W.
  TITLE     Crystal structure of the Mor protein of bacteriophage Mu, a member
            of the Mor/C family of transcription activators
  JOURNAL   J Biol Chem 279 (16), 16581-16590 (2004)
   PUBMED   14729670
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020345.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08765.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..140
                     /product="Mor transcription activator family protein"
                     /calculated_mol_wt=16469
     Region          29..133
                     /region_name="Mor"
                     /note="Mor transcription activator family; pfam08765"
                     /db_xref="CDD:400902"
ORIGIN      
        1 mqhdlfehdp airqlighid nipapelesr wprsvvdlid vlenelkrqn vrnprelark
       61 qavalscflg grqfyipcgd tiltalrddl lycqfngrnm eelrrqyrls qpqiyqiiar
      121 qrklhtrrhq pdlfspesqk
//
LOCUS       WP_258125549             960 aa            linear   BCT 02-MAR-2025
DEFINITION  leucine-rich repeat domain-containing protein [Bacillus sp.
            IBL03825].
ACCESSION   WP_258125549
VERSION     WP_258125549.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. IBL03825
  ORGANISM  Bacillus sp. IBL03825
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 960)
  AUTHORS   Kobe,B. and Deisenhofer,J.
  TITLE     The leucine-rich repeat: a versatile binding motif
  JOURNAL   Trends Biochem Sci 19 (10), 415-421 (1994)
   PUBMED   7817399
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024209.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12799.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Bacillus sp. IBL03825"
                     /db_xref="taxon:2953580"
     Protein         1..960
                     /product="leucine-rich repeat domain-containing protein"
                     /calculated_mol_wt=109032
     Region          25..>534
                     /region_name="inl_like_NEAT_1"
                     /note="NEAT domain-containing leucine-rich repeat protein;
                     NF033190"
                     /db_xref="CDD:467986"
     Region          245..266
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          267..288
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          289..310
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          311..332
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          333..354
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          355..376
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          377..398
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          399..420
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          478..>671
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          593..636
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          637..658
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          921..956
                     /region_name="Gram_pos_anchor"
                     /note="LPXTG cell wall anchor motif; pfam00746"
                     /db_xref="CDD:366278"
ORIGIN      
        1 mkknkrkhin amlvaaalal pfaaystpal aavaieankk gysledgtyd avmkaykdkt
       61 neesmatvyi knpkltieng kkivtatlsd sdffkylkte dihtpgvfhd vkvisedkkk
      121 ngtkviqfev gelgkrynmq mhiyiptmay dnkyqvqfev nalnlennvp ekqkenkedk
      181 vdqqdenanv ivdkklqqhi nkynlerkni nepitkedll qikilsiysg egineiagle
      241 ymtnlekltl resnvtdisv isglrhlkyl dlssnpiesi qpvsklenld mlflrdnkia
      301 dltplsqmkk ikildlignn ikdltplftv lsleevylan nqisnlsgie klknvkllwi
      361 gnnkisdvep iskmsnliel eiadseikdi sslsklvkiq vlnleenyis displsnltn
      421 lhevnlgane isdiksveel gkrtsidiqr qkifldeasv deeikipvyn fkgeplqnik
      481 lknegatlsn gfikwnspge kiyefkldtn paeskirfng mvvqnivekq kesenlildk
      541 tlqqhinken lgrenlntpi tkedllqikk leilkekeke ikditgleym tnlenltleg
      601 vglkniefis nlkqlndvnv shnqiedvtp lsslknlqwl nltdnrikdv tvlgsmldll
      661 slklaeneir dvrpliqlgq wgtidvrrqk vildaaeink evtipvynle gepiekitlk
      721 seggtltdeg iiwntlgeki yefdldadhy etgilysgiv mqniveklip keevkeptke
      781 veeakeevke ptkeveeake evkeptkeve etkeevkepv keveetkeev kepvkeveet
      841 keevkepvke veetkeevke pvkeveetke evkeptkeve evkesatgld qepkennqvv
      901 ekegrkadtl nkqhtnksee gkkslpstgg eaststllsg itlvlstlsm fvfrkrlfkk
//
LOCUS       WP_258125576             820 aa            linear   BCT 02-MAR-2025
DEFINITION  LamG-like jellyroll fold domain-containing protein [Bacillus sp.
            IBL03825].
ACCESSION   WP_258125576
VERSION     WP_258125576.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. IBL03825
  ORGANISM  Bacillus sp. IBL03825
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 820)
  AUTHORS   Thompson,D., Pepys,M.B. and Wood,S.P.
  TITLE     The physiological structure of human C-reactive protein and its
            complex with phosphocholine
  JOURNAL   Structure 7 (2), 169-177 (1999)
   PUBMED   10368284
REFERENCE   2  (residues 1 to 820)
  AUTHORS   Beckmann,G., Hanke,J., Bork,P. and Reich,J.G.
  TITLE     Merging extracellular domains: fold prediction for laminin G-like
            and amino-terminal thrombospondin-like modules based on homology to
            pentraxins
  JOURNAL   J Mol Biol 275 (5), 725-730 (1998)
   PUBMED   9480764
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024777.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13385.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Bacillus sp. IBL03825"
                     /db_xref="taxon:2953580"
     Protein         1..820
                     /product="LamG-like jellyroll fold domain-containing
                     protein"
                     /calculated_mol_wt=91068
     Region          52..306
                     /region_name="CpdA"
                     /note="3',5'-cyclic AMP phosphodiesterase CpdA [Signal
                     transduction mechanisms]; COG1409"
                     /db_xref="CDD:441019"
     Region          344..439
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(428..429,431..432)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          517..649
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
ORIGIN      
        1 mertalrkvk gligllmvfv lafvsfpwst svkaeekkqe kapsekkivf pvvsdvhikn
       61 sgtddtfrwk raieqfntla pkqdafvivg dftdsgsvqq ydrfmqvyne nankdavrmn
      121 slgnhdywng lsvegaqkrf lektgmesiy yhkvvkgyhf lvmspenett hgyysdkqin
      181 wlkeemakvq kddpekpifv flhqhikdtv ygsqewgtkd sakinevlkq ypqvitfsgh
      241 shyplddprs ihqkdftsvg tssvsymeve ggkvqgnips esralsqgll vevddkevti
      301 nrrdfhtnsw tgepwkiklp skkdtfthve drdkerphfa kdaklavsnv tenaatvtfm
      361 qaldnllvhs yrvqardkqt geiknkllaf sefyrdpvpk eltftlagld ggktytlevv
      421 aidsfgnesv qpltaeittk kdnidpnvkv pkadvfdvnf adgtfkdnss fgtkgdvkgn
      481 vtieydkalk knvmklngka ntfgylpfsa aqkekvantf tletvfsmne irgqgilqnt
      541 esggigfest gsgyvelwah iggsykrvgv qleanktyhl tgtyngseva iyvdgkkvns
      601 qpatgkvyhp nvpfalgadp dsngnggipl ngqialakly skalsssevl aaynefssrt
      661 kleqvnalye elgkvkevla gtyefgdkpg qyskeafqal eksyntakqa fenvgstgek
      721 ivqtynelkt anvtfvqskv aeeqpktpke klqinietak avvkkaqaan vtdgsvksls
      781 qkvtvaeavl kdakvkdaqv etmnrtveya islveksink
//
LOCUS       WP_258125588             813 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DEAD/DEAH box helicase family protein [Bacillus].
ACCESSION   WP_258125588
VERSION     WP_258125588.1
KEYWORDS    RefSeq.
SOURCE      Bacillus
  ORGANISM  Bacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016724.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04851.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Bacillus"
                     /db_xref="taxon:1386"
     Protein         1..813
                     /product="DEAD/DEAH box helicase family protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=94429
     Region          9..149
                     /region_name="PLDc_N_DEXD_b3"
                     /note="N-terminal putative catalytic domain of
                     uncharacterized prokaryotic and archeal HKD family
                     nucleases fused to a DEAD/DEAH box helicase domain;
                     cd09205"
                     /db_xref="CDD:197299"
     Site            order(91..96,109,111,113,121..125,127,129)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:197299"
     Site            order(93,95,111,113,124)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197299"
     Site            93
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197299"
     Region          217..731
                     /region_name="SSL2"
                     /note="Superfamily II DNA or RNA helicase [Transcription,
                     Replication, recombination, and repair]; COG1061"
                     /db_xref="CDD:440681"
ORIGIN      
        1 mtnvqlvtnn lihklerymd daksiyilts fvmksgvnvl apllrvaaek nvdikictgd
       61 ylyitqpdal eklyqihpdi eirlwksagk sfhpkaylfe resdgvmivg ssnmsrsalt
      121 sgvewsllvk esvgeeafse aidqflhihm neatqsinve tikqyrkeye gfhtthsnli
      181 rtwtkqeeie mmmpsgqedy sassgvevel eesavyetki aprfaqipal eqlenvleeg
      241 ynkamvvmat glgktylaaf ftgrfkrvlf iahleeilnq aersflrvid nkttgiyngk
      301 kkegekdvvf asiqtlsrkr hlenfspndf dliivdelhh aaansyqrvl dyfkpnfllg
      361 itatpdrnef rdiysicdgn vayridfmea iqrgwlspfr yygvhdetdy sqirwignky
      421 dreelaqvql reelalnile awkkykktrt ivfcssirqa vflstyfnen gyntislhse
      481 tkdisredai krldsnelda iftvdlfneg vdipsvdtll fvrpteslti ftqqigrglr
      541 lheqkescvv idlianyrna dikmqmlrvd dgktrgngtq nilpagctve feleakqlld
      601 elmkkkmprk eklqhsyqtv kmdlgrrpty lelhklgtee skeyrqefks yvgflawnde
      661 ltaqekavfl hyeawlqeve ktgmaksykm llllamlqrg keswyhpisp gevapffhqf
      721 lmekeyrkri dfsdkqaqrm wdydeekvsk littmpmtkw sdsskgllsf densfslnmd
      781 irkadeellf ewtkeiceyr lhtyferrta tlk
//
LOCUS       WP_258125534             113 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar biosynthetic protein FliR [Escherichia coli].
ACCESSION   WP_258125534
VERSION     WP_258125534.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 113)
  AUTHORS   Zhuang,W.Y. and Shapiro,L.
  TITLE     Caulobacter FliQ and FliR membrane proteins, required for flagellar
            biogenesis and cell division, belong to a family of virulence
            factor export proteins
  JOURNAL   J Bacteriol 177 (2), 343-356 (1995)
   PUBMED   7814323
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013478.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01311.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..113
                     /product="flagellar biosynthetic protein FliR"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0006605 - protein targeting [Evidence
                     IEA]"
                     /calculated_mol_wt=12589
     Region          <1..112
                     /region_name="fliR"
                     /note="flagellar type III secretion system protein FliR;
                     cl00734"
                     /db_xref="CDD:469896"
ORIGIN      
        1 mnfiletlwq synlwpsgnf nfpkleplfs yinnimthti vyaspviavm lggeavlgll
       61 aryasqlnaf aisltvksal afliliiyfg pilagrvmpl sffpeqlqly iek
//
LOCUS       WP_258125739            1632 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail tape measure protein [Bacillus sp. IBL03825].
ACCESSION   WP_258125739
VERSION     WP_258125739.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. IBL03825
  ORGANISM  Bacillus sp. IBL03825
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10145.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1632
                     /organism="Bacillus sp. IBL03825"
                     /db_xref="taxon:2953580"
     Protein         1..1632
                     /product="phage tail tape measure protein"
                     /calculated_mol_wt=176156
     Region          14..>326
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          174..1126
                     /region_name="YqbO"
                     /note="Phage-related minor tail protein [Mobilome:
                     prophages, transposons]; COG5280"
                     /db_xref="CDD:444091"
     Region          <1182..>1423
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
ORIGIN      
        1 malgdntigg rvrldtdqfe ngiaginrsl kridaefrnt seqlrgvgse mdqlenktnh
       61 lnqkieaqtq kmkhyeqalr tsqqkqqemr qkceqlatsm qqleqeiqqs tqaygknaqe
      121 tkdlqaqynq lqqeykqgtq alqrltaqvs rndtafnnas aalhrfrnel gdteermdql
      181 snvsgrmrer mnevgnsmqe tgtrisqgfg aaavgvaagv galvvnasqf eeankkvqag
      241 lgltreeslk vsavarevwr egygedlasv sdslvkvkrn ikdinddetl kqvtrdseil
      301 aetmesdvne vtrgaaqlmg rfglsgqqaf dllaqgsakg lnysnelfdn lseygplfne
      361 mgfsaeemft ilingsknga ynldyvndvm kefqirvkdg skstsdamge mskgtqkvwq
      421 eflkgkgtvk dvfnavlnel kssddqikvn qlgvslfgtk wedleattml slnnmetglg
      481 dysgamnkmv dgydtsakqw ksvtrelqia leplgkvild iakqaipelk esikgvadwf
      541 nglddstkkv ygtslllapv vlgvvsalgm lsfaigaiia npivatiggv viglgalgfa
      601 faeagkkakq aeedsrkyge gvsegtkkal egyvnlkeka fktldeipvl tgdkakeavq
      661 rahdefgkla deaiqainkd kgklqahlds wfsgetdsav lrakdkilnd qmevfkaqee
      721 avikanekiq slltqyngqi ykmsaadksv flaalksids evgksasksv deiqkigkam
      781 dnfnkntsve tiqgkvkdlg kqytslyndl dkarqkeief akskiadtkg qevaiaqink
      841 kyseqsilit egykqqlqha qevlkskgie mdltsgitka eqekitiqgr sfgeyvknse
      901 mieskndnlf rrlqersake selrqksaee vkrygealia nsntvydslf qstrekavqv
      961 gsdiayaled gtkavnlgek gvvkveefvd giktgkykvq dvavalintm riemgnkplt
     1021 aegikvmntf adglkqmnvs diatklnldl kknlevdlgp lgkmtstqfv nglkegtvgi
     1081 davfiffqqh lskltakdls qdgtkimatl ktgmetgfls vqdvlqklgi siedktkynl
     1141 gpngevtiss lvkglqtgqf sidqalevir qmvvtktnvd ttqqganisq ttadgirqng
     1201 gqpvqaagev kqgvegtlgs ttdgnggams tllmrqfmaq nkpgivgeas gikqgveqql
     1261 gsttdnnggn nstsmmrnni vnnhgsvvga asgvksgvei slgsttdgng gsnstnimqr
     1321 misgnrgnvv gsassvkqgv egtlgsatdg gggakagsdf argignqsgs arssgvsvae
     1381 sgksglnsvs ansaggsfaq gfadgmsskg sivsrvasgl aqgafaalra tldvnspskl
     1441 trdqggmpfg egfalgikqs ssmaekesrt lafqansalv nelnknehtf agvrmaqgia
     1501 sgiksqssiv rdalqntveg amdgirsfkp nqllslqgnf sgnmreiisn igrniarfen
     1561 lssmdigrlr gwetvisnnn rnrehapvdn ktiqpktptq ivnhfynqdt sevmrqqqrv
     1621 lnevaftwgg ts
//
LOCUS       WP_258125853             422 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Bacillus sp. IBL03825].
ACCESSION   WP_258125853
VERSION     WP_258125853.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. IBL03825
  ORGANISM  Bacillus sp. IBL03825
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Bacillus sp. IBL03825"
                     /db_xref="taxon:2953580"
     Protein         1..422
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=43291
     Region          30..419
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(37..38,41..42,45,77,130..131,133..135,138,157,
                     160..161,164,251,254..255,258..260,263,290,294,345..346,
                     350,354,370,373..374,377..378,381)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
ORIGIN      
        1 midtadasis nhiyteeeqq klykrtlliv sisqmfggag laagitvgal laqqmlgtda
       61 yaglpaamft mgsavaaffv gklsqkhgrr iglaggfivg gigaigvvva altnsiilll
      121 vslliygagt atnlqaryag tdlankkqra taisitmvmt tfgavvgpnl vgvmgrfahs
      181 igipelagpf ilsaaafila glilfvmlrp dpllianmie tykqehtykg qpvieeaten
      241 krgitvgaiv miltqivmva imtmtpvhmg hhghalsavg lvigfhvgam ylpslvtgml
      301 idkigrttms iaggvillaa gviaaiapsd slillilals llglgwnlgl isgtaqivda
      361 tipstraktq gkidvfiala gasggamsgm vvanssyaal slaggvlafm lipvviwtrt
      421 gk
//
LOCUS       WP_258125895             671 aa            linear   BCT 02-MAR-2025
DEFINITION  tape measure protein [Escherichia coli].
ACCESSION   WP_258125895
VERSION     WP_258125895.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040129.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20155.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..671
                     /product="tape measure protein"
                     /calculated_mol_wt=71767
     Region          20..>370
                     /region_name="HI1514"
                     /note="Phage tail tape-measure protein, controls tail
                     length [Mobilome: prophages, transposons]; COG3941"
                     /db_xref="CDD:443141"
ORIGIN      
        1 mtgkrlkasv iidlngnlsr rsrqysnqin alsrsgqssl ralrmevvrv sgaidrmgsl
       61 strtfrmlsa galgiagvgy tanklfigaa aqreqqiiam nslyhgdkvr aqammawakq
      121 nakdtswgls gvldeirssk gfgmtdeqtk qfitmlqdqg amhgwdlpta qgaslqlkqm
      181 farqqitaad anlltgygin vyqtladalg kdvrdirkqg ekgklglksi ltvfrtlseq
      241 skgaqasamn swdgmfaqme anllefrikv ansgpfeeik nemrrvlnwh dmadksgeld
      301 alaenigqnf lttfrtvkia aqelwrwlkp gkdalawvdq nivslkklaa vlvsvwltnk
      361 alragwavak pswqvasypf ktgrrmwrwm rnrkrgqagl pvpdamtset llqgigiqrv
      421 fvinwprgfg gyrsgggrrv rsggrmapll prqplllsgp qplalpaplp lpgksgllsr
      481 lagsaagqlv tgtvgklada gravggwfsg ignklsgsvi grvvtkgaga lgwmgkgagr
      541 alsrlggpvm galqlapvlm deqastheka gaigstagaw lggavgslag plgtvagatl
      601 gsvageylgg fvtdlyqkwt apdkepqeqk vnaeaslrve lgeglrltss rvtedgmgln
      661 iyagdnyitg w
//
LOCUS       WP_258125897             439 aa            linear   BCT 02-MAR-2025
DEFINITION  phage minor head protein [Escherichia coli].
ACCESSION   WP_258125897
VERSION     WP_258125897.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 439)
  AUTHORS   Vinga,I., Droge,A., Stiege,A.C., Lurz,R., Santos,M.A.,
            Daugelavicius,R. and Tavares,P.
  TITLE     The minor capsid protein gp7 of bacteriophage SPP1 is required for
            efficient infection of Bacillus subtilis
  JOURNAL   Mol Microbiol 61 (6), 1609-1621 (2006)
   PUBMED   16899078
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016148.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04233.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..439
                     /product="phage minor head protein"
                     /calculated_mol_wt=49336
     Region          6..253
                     /region_name="COG2369"
                     /note="Uncharacterized protein, contains phage Mu head
                     morphogenesis gpF-like domain [Mobilome: prophages,
                     transposons]"
                     /db_xref="CDD:441936"
     Region          349..428
                     /region_name="MuF_C"
                     /note="Phage MuF-C-terminal domain; pfam18819"
                     /db_xref="CDD:436762"
ORIGIN      
        1 mpqqtidlay aarlppkeav ayfrakgyni twnwyeqlad aharaftvak atrmdvltti
       61 reeveravse gitreeftrt laprlqklgw wgkqiivdad gnakeielgs prrlatiynv
      121 ntrtaygagr yaqmmntadl ypywqyvavm dgrtrpehar lhnmvfrydd ifwqthyppn
      181 gwncrcrvra vsaarmkelg lqvsygasfm ntrevdagtd estgeifrts sttfdngrvk
      241 mtpdvgwsyn pgsaafgtdq alirklveih dvqlreqvvq tlnnsrerql afslwlkrla
      301 gsrqtgheir algfmtgsva eavyqrtgnm parllvmngk slattadaal kpedlqrlps
      361 lmakpqavlw drenhqllyv vatrdgmari vvrtsqtvgr qndradvlvs isrvsaqsle
      421 aaiadgmidv leghvevnk
//
LOCUS       WP_258125900             551 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase large subunit domain-containing protein [Escherichia
            coli].
ACCESSION   WP_258125900
VERSION     WP_258125900.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 551)
  AUTHORS   Baumann,R.G. and Black,L.W.
  TITLE     Isolation and characterization of T4 bacteriophage gp17 terminase,
            a large subunit multimer with enhanced ATPase activity
  JOURNAL   J Biol Chem 278 (7), 4618-4627 (2003)
   PUBMED   12466275
REFERENCE   2  (residues 1 to 551)
  AUTHORS   Lang,A.S., Taylor,T.A. and Beatty,J.T.
  TITLE     Evolutionary implications of phylogenetic analyses of the gene
            transfer agent (GTA) of Rhodobacter capsulatus
  JOURNAL   J Mol Evol 55 (5), 534-543 (2002)
   PUBMED   12399927
REFERENCE   3  (residues 1 to 551)
  AUTHORS   Mitchell,M.S., Matsuzaki,S., Imai,S. and Rao,V.B.
  TITLE     Sequence analysis of bacteriophage T4 DNA packaging/terminase genes
            16 and 17 reveals a common ATPase center in the large subunit of
            viral terminases
  JOURNAL   Nucleic Acids Res 30 (18), 4009-4021 (2002)
   PUBMED   12235385
REFERENCE   4  (residues 1 to 551)
  AUTHORS   Lang,A.S. and Beatty,J.T.
  TITLE     The gene transfer agent of Rhodobacter capsulatus and 'constitutive
            transduction' in prokaryotes
  JOURNAL   Arch Microbiol 175 (4), 241-249 (2001)
   PUBMED   11382219
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015211.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03237.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..551
                     /product="terminase large subunit domain-containing
                     protein"
                     /calculated_mol_wt=62649
     Region          37..532
                     /region_name="COG4373"
                     /note="Mu-like prophage FluMu protein gp28 [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443501"
ORIGIN      
        1 mntrennlka lhaprkinlr eeaellgvni vtdigeaqpr nepvflgyqr rwfedesqic
       61 iaeksrrtgl twaeagrnvm taakprrrgg rnvfyvgsrq emaleyiaac alfarafnql
      121 akadvweqtf wdsdkkeeil tymirfpnsg fkvqalssrp snlrglqgdv videaafhea
      181 ldellkaafa ltmwgarvri isthngvdnl fnqyiqdare grkdysvhri tlddaiadgl
      241 yrricyvtnq pwspeaekaw rdglyrnapn kesadeeygc ipkksggayl srvlieaamt
      301 pvrdipilrf eapddfeslt pqmrhgivqd wceqellpll dalsllnkhv lgedfarrgd
      361 ltvfvplait pdlrkrecfr velrnvtydq qrqillfils rlprftgaaf datgnggyla
      421 eaarliygpe midcvnltas wyqewmpklk gefeaqniti arhqttlddl lhikvdkgip
      481 qidkgrtkde ggkgrrhgdf avalcmavra symngfvide dsiqalpprh rgdgvdnddf
      541 ddyhqfergg w
//
LOCUS       WP_258125911             302 aa            linear   BCT 02-MAR-2025
DEFINITION  CfaE/CblD family pilus tip adhesin [Escherichia coli].
ACCESSION   WP_258125911
VERSION     WP_258125911.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 302)
  AUTHORS   Sajjan,U.S., Xie,H., Lefebre,M.D., Valvano,M.A. and Forstner,J.F.
  TITLE     Identification and molecular analysis of cable pilus biosynthesis
            genes in Burkholderia cepacia
  JOURNAL   Microbiology (Reading) 149 (Pt 4), 961-971 (2003)
   PUBMED   12686638
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019078.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07434.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..302
                     /product="CfaE/CblD family pilus tip adhesin"
                     /calculated_mol_wt=33631
     Region          48..298
                     /region_name="CblD"
                     /note="CblD like pilus biogenesis initiator; pfam07434"
                     /db_xref="CDD:462164"
ORIGIN      
        1 mrnrliaail glfgtltgvq aapdvtseit ydlasgrady yfwkdeappg ckggkglqtn
       61 lkdsnrssct edgqhyyiyd tkfltlyleq temknlpigg vwkgkvklhs nspaqdyfan
      121 itlntldpnh idvffpefah atprvqldlh ptgsvngsny aqdltmldmc lydgfngnai
      181 syeimlkdeg rpaagrrdgy fsiyrqggtt tdegeridyr vkmynpetgg qidvrnnenm
      241 vwnsinlkrv rpvvlpgiry avmcvptplt lavdkfsvmd kqagyymgkl sviftpslpt
      301 in
//
LOCUS       WP_258125958             438 aa            linear   BCT 02-MAR-2025
DEFINITION  BclA C-terminal domain-containing protein [Bacillus sp. IBL03825].
ACCESSION   WP_258125958
VERSION     WP_258125958.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. IBL03825
  ORGANISM  Bacillus sp. IBL03825
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 438)
  AUTHORS   Kirchdoerfer,R.N., Herrin,B.R., Han,B.W., Turnbough,C.L. Jr.,
            Cooper,M.D. and Wilson,I.A.
  TITLE     Variable lymphocyte receptor recognition of the immunodominant
            glycoprotein of Bacillus anthracis spores
  JOURNAL   Structure 20 (3), 479-486 (2012)
   PUBMED   22405006
REFERENCE   2  (residues 1 to 438)
  AUTHORS   Liu,C.Q., Nuttall,S.D., Tran,H., Wilkins,M., Streltsov,V.A. and
            Alderton,M.R.
  TITLE     Construction, crystal structure and application of a recombinant
            protein that lacks the collagen-like region of BclA from Bacillus
            anthracis spores
  JOURNAL   Biotechnol Bioeng 99 (4), 774-782 (2008)
   PUBMED   17879302
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18573.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Bacillus sp. IBL03825"
                     /db_xref="taxon:2953580"
     Protein         1..438
                     /product="BclA C-terminal domain-containing protein"
                     /calculated_mol_wt=41280
     Region          <31..>295
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          309..438
                     /region_name="BclA_C"
                     /note="BclA C-terminal domain; pfam18573"
                     /db_xref="CDD:436587"
ORIGIN      
        1 mskfkknchi pfpcafplpq igstgltgat gptgatgpsg gprgptgptg iqgslgptgp
       61 qgisgpqgip gisgsigptg psgiqgiqgi qgipgiqgpi gptgitgvtg iqgipgiqgi
      121 pgiqgiqgiq gipgptgpqg ipgipgsegp tgpsgavgpt gpsggppgpt gptgpsggpp
      181 gptgvtgptg psgspgptgl qgiqgiqgip gptgpqgsqg iqgiqgnpgp igpigptgit
      241 gatgiqgiqg iqgnpgligp igptgptglq giqgiqgipg ptglpgtaga tgptgptglt
      301 vsglshyayv fntaaqvval eapilfnshg rmtsgfthtl gtsqlmvlna gdykisfsvs
      361 gvepnqftlf lngapvtsav ygsgagtqpn ngqtilalaa gdiitlnnht saaavtlqtl
      421 aggtqtnina siviekln
//
LOCUS       WP_258125981             438 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar filament capping protein FliD [Escherichia coli].
ACCESSION   WP_258125981
VERSION     WP_258125981.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 438)
  AUTHORS   Tasteyre,A., Karjalainen,T., Avesani,V., Delmee,M., Collignon,A.,
            Bourlioux,P. and Barc,M.C.
  TITLE     Molecular characterization of fliD gene encoding flagellar cap and
            its expression among Clostridium difficile isolates from different
            serogroups
  JOURNAL   J Clin Microbiol 39 (3), 1178-1183 (2001)
   PUBMED   11230454
REFERENCE   2  (residues 1 to 438)
  AUTHORS   Arora,S.K., Ritchings,B.W., Almira,E.C., Lory,S. and Ramphal,R.
  TITLE     The Pseudomonas aeruginosa flagellar cap protein, FliD, is
            responsible for mucin adhesion
  JOURNAL   Infect Immun 66 (3), 1000-1007 (1998)
   PUBMED   9488388
REFERENCE   3  (residues 1 to 438)
  AUTHORS   Chen,L. and Helmann,J.D.
  TITLE     The Bacillus subtilis sigma D-dependent operon encoding the
            flagellar proteins FliD, FliS, and FliT
  JOURNAL   J Bacteriol 176 (11), 3093-3101 (1994)
   PUBMED   8195064
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07195.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     gene            1..438
                     /gene="fliD"
     Protein         1..438
                     /product="flagellar filament capping protein FliD"
                     /GO_component="GO:0009288 - bacterial-type flagellum
                     [Evidence IEA]"
                     /GO_process="GO:0007155 - cell adhesion [Evidence IEA]"
                     /calculated_mol_wt=45882
     Region          23..422
                     /region_name="FliD"
                     /note="Flagellar capping protein FliD [Cell motility];
                     COG1345"
                     /db_xref="CDD:440956"
ORIGIN      
        1 minprtiaqe iayadvatqa anlqekqtel daessgldsl ssalsdfqsa vdalnsdtdg
       61 pvtfaatsnn dsatvsansq aqagsysffv eqlaqgqqtt fsmgddafsa tgtfeltmgd
      121 stmdidlsaa dqngdgdgfi daselvnain dsddnpgvsa alvktdgttt imltsdstga
      181 qsafsvsvtg hdasndstsa pvatdvssaq daiihlgsat gpeitnssnt fddvipsvtm
      241 tftevsdsds dlttfnised ssasqekvqt fvdayntlid tvdsltthgd dstsagvfag
      301 daglsslanq lddiahasyn gvsivdygit ldshghlqid sdqfndemak npdgltsifv
      361 gdnsmvaqmd dlintytdss ngiitlrqqn iddqmskiqd egdqltdtyn anydryleey
      421 tntlvevytm kasmaafa
//
LOCUS       WP_258126010             891 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Bacillus sp. IBL03825].
ACCESSION   WP_258126010
VERSION     WP_258126010.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. IBL03825
  ORGANISM  Bacillus sp. IBL03825
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025910.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14559.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..891
                     /organism="Bacillus sp. IBL03825"
                     /db_xref="taxon:2953580"
     Protein         1..891
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=102054
     Region          36..228
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(36..37,40,42,55,57,90,111..114,157,161..162,164,
                     182..183)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          488..>631
                     /region_name="YfgM"
                     /note="Putative negative regulator of RcsB-dependent
                     stress response, UPF0070 family [Signal transduction
                     mechanisms]; COG2976"
                     /db_xref="CDD:442215"
     Region          533..561
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(567,570..571,574..575,577,604,607..608,611..612,
                     614..615,643,646..647,650..651,654)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          567..597
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          569..868
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          602..637
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          676..706
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          728..751
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          757..798
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(758,761..762,765..766,768,805,808..809,812..813,
                     815..816,839,842..843,846..847,850)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          803..833
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          838..863
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mgfrpevgek islnkdvyrf ekhpavigie mpygqegrqg tvyqlqqeng verialkvfk
       61 eryreekhql aflkplsslv glkvcsryiv tkeehtsaie ksedlansiv mpwiegptwa
      121 diiqeqrmls keqcffiaea flttlkmmee nevahndlss snvlvpflse nptegqhnie
      181 lvdveqmygp ktkrpsllpa gsagyapmyl ksgvwqkead rfagaillge ilswcseevr
      241 nkkwtdasyf kteemqtece rytllrqvlh nqwngeiakl frqawssnsf aecpsfaqwy
      301 dvfnsarerm kidaerqsae ehslfvskcl eiarlleerg fkqaalyeyk iifnslnpst
      361 alqkelayii qtmesqepei nnkmvlqhyl elateleren naafacfvys rivqfpnidq
      421 alkqeiesii eeikeeqgtq sqqevaatit vptsilqsrk qtkkqveydv ddeilnakas
      481 nqpltitheq sepsafskww kknrkrilii gstvvvvigg stlfyfyttn akyqkfmeqa
      541 rqayhdkkyt kaeeavghai avkgkdeayl qlatiyvaeg knkiaidyit klikdreidk
      601 enneaaylla sanfrigkyq eavqnfeqal annakgiepy kkdamrdlav chmkmkefek
      661 aedvivkmst ktnedkaivs ylkgqlstat vqldkaesff keaimqdskn aiytielsnl
      721 yvlwnktnli dsakkemnyq qashilqvai qkdmkniell nqlgivyyea gqfyetrdga
      781 kstaayqqal eaynrvvssg trdintlvni gilydkvgqg neaeklftea ysqndenphv
      841 nfafgmfkik qkkyedasrf lrktvqanen esevraaqek ltemktsgwi q
//
LOCUS       WP_258126088             465 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase [Escherichia coli].
ACCESSION   WP_258126088
VERSION     WP_258126088.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 465)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 465)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..465
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
                     /calculated_mol_wt=52758
     Region          236..449
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(254,268..269,355,357,370,429)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:271182"
     Site            order(268,370,382,417,429)
                     /site_type="active"
                     /db_xref="CDD:271182"
ORIGIN      
        1 mprtvthnpd spnnddvlaa sekwdackpp ytsahmkicv aaakiilaas gvarrskyek
       61 enylridfsk agkvtfyaef pkkmglkgkk lgewpelaiq larekalgma dgglraesvh
      121 aalemyrddl kakvarqkls pdsfttygvr idrikatfge revfsdvtys rlvevldewi
      181 strsnnnale lfaelrrfwk fcaptlcngr nvaaslpddy vssrvqkptp trlftdiesi
      241 arlwlnvaac tsvhqknavr fmiitgvrpi nvhnlrwdyv heeageivyp egvigmrgam
      301 ktqkafrlpi tpeirriide qkawrdsvpe cnrdyvflqp rdpmqpfskr sldklvktys
      361 pdgavkgikh dgtvkgkdga fntmcrkflk snvialmker gysrsdrrei sllclhhssk
      421 sddpmaehyd fsdeilqeei alkreafeah ersilaqval lrrrg
//
LOCUS       WP_258126093             236 aa            linear   BCT 02-MAR-2025
DEFINITION  family 1 glycosylhydrolase, partial [Escherichia coli].
ACCESSION   WP_258126093
VERSION     WP_258126093.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012457.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00232.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..236
                     /product="family 1 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
     Region          <25..234
                     /region_name="Glycosyl hydrolases"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     cl23725"
                     /db_xref="CDD:474034"
ORIGIN      
        1 lildgysess ysatprfaaa rlpwffgdvq argqypgymq rffrdhniti emtesdaedl
       61 khtvdfisfs yymtgcvshd esinknaqgn ilnmipnphl kssewgwqid pvglrvllnt
      121 lwdryqkplf ivenglgakd sveadgsiqd dyriaylndh lvqvneaiad gvdimgytsw
      181 gpidlvsash sqmskrygfi yvdrddngeg sltrtrkksf gwyaeviktr glslkk
//
LOCUS       WP_258126102            1056 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ATP-binding cassette domain-containing protein
            [Bacillus].
ACCESSION   WP_258126102
VERSION     WP_258126102.1
KEYWORDS    RefSeq.
SOURCE      Bacillus
  ORGANISM  Bacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 1056)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 1056)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 1056)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 1056)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Bacillus"
                     /db_xref="taxon:1386"
     Protein         1..1056
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=120229
     Region          1..305
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            28..35
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213205"
     Site            order(31..32,34..36,86,244..245,276)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:213205"
     Site            83..86
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213205"
     Site            219..228
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213205"
     Site            240..245
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213205"
     Site            248..251
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213205"
     Site            272..278
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213205"
     Region          324..548
                     /region_name="ABC_UvrA"
                     /note="ATP-binding cassette domain of the excision repair
                     protein UvrA; cd03238"
                     /db_xref="CDD:213205"
     Region          <659..>836
                     /region_name="uvrA"
                     /note="excinuclease ABC subunit UvrA; PRK00349"
                     /db_xref="CDD:234734"
     Region          955..>997
                     /region_name="Lar_restr_allev"
                     /note="Restriction alleviation protein Lar; cl08047"
                     /db_xref="CDD:471789"
ORIGIN      
        1 mkvnqliann inkldtaipf nksfgiagls gsgkttfcqt igeeskkrlv sllpkaeyqy
       61 lfpnimetnf saikiedmpl vlflgkssis snprstigth tgvftevrek ladvfhlspe
      121 vfsfnnqlgw ctgckgrgtt knieckkcmg kryseeieqh tidlfakpht isnindlsve
      181 silslaeeln iseakqhilk niinmnigyl tlnrimgtls ggeltrlyla efmavsenav
      241 iiideisvgl dhetllqile eikqlgcknq iwlidhsdtv ldttdeqlff gpgsgkyggq
      301 ivkesprpkp ilsdlnkevp teyytfheln crniqmaefq ipknrlvtvt gesgcgkstl
      361 vneclatdfl krypkdklvm vgqdrnqsit srstvatfld ikkkltkyse eiddifersi
      421 ediidelpne diaykrlsll iklglgyltl erktqtlstg efqcvhlvse lfantrnpht
      481 lfifdepskg lsqnilnqfi dsvrgilqde svsiimiehn symlessdyi vdfgkrqles
      541 ikhldvvshe dyyrqkssvn naeqihissa lkhkegvhyl eenhihyfkn aeniykggil
      601 kslssmarli yseyesdtia pvvaidlerh lysqysflye igglinhiva ahptnkdtrs
      661 fdfysqdnhc pscsgrlqie vfdkdiaiqd knvpfwdglf dpeimkvlkf yqyekieflf
      721 eeiknelghd lsksyndmse eekhtfwygy feksfydkkg ktrrtwvgfn tiiggyivis
      781 kaaikeeikt skelitcpic egtvlnhqkp lkfanfdire iinqpidevl kivgdlpalq
      841 klksivggdm rltedvsllp rkaqvalkmf eleqasfsny emvlqnvlpf wdeikgnies
      901 isvnnqvtvc dfpnvyetre niidkyftng kykkltyvye afgykklvtq inkikksnpc
      961 pfckgkkvit ednlhdgvfk ltipcvtcta tgindeglke vvesvdvqtw ltgkvcdvvd
     1021 eslltedvsq ipifnrirel dkqdmmavye cleinn
//
LOCUS       WP_258126106             498 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail sheath subtilisin-like domain-containing protein
            [Escherichia coli].
ACCESSION   WP_258126106
VERSION     WP_258126106.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 498)
  AUTHORS   Xue,Q. and Egan,J.B.
  TITLE     Tail sheath and tail tube genes of the temperate coliphage 186
  JOURNAL   Virology 212 (1), 218-221 (1995)
   PUBMED   7676633
REFERENCE   2  (residues 1 to 498)
  AUTHORS   Temple,L.M., Forsburg,S.L., Calendar,R. and Christie,G.E.
  TITLE     Nucleotide sequence of the genes encoding the major tail sheath and
            tail tube proteins of bacteriophage P2
  JOURNAL   Virology 181 (1), 353-358 (1991)
   PUBMED   1825255
REFERENCE   3  (residues 1 to 498)
  AUTHORS   Arisaka,F., Ishimoto,L., Kassavetis,G., Kumazaki,T. and Ishii,S.
  TITLE     Nucleotide sequence of the tail tube structural gene of
            bacteriophage T4
  JOURNAL   J Virol 62 (3), 882-886 (1988)
   PUBMED   2963141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04984.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..498
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
                     /calculated_mol_wt=53256
     Region          1..491
                     /region_name="gpL"
                     /note="Mu-like prophage tail sheath protein gpL [Mobilome:
                     prophages, transposons]; COG4386"
                     /db_xref="CDD:443512"
ORIGIN      
        1 mtisfsavps ntlvplfyae mdnsaantav tsapalligh asndaaievn slvlmpsady
       61 arqicgagsq larmvdvyrq tdpfgelyvi avpeargaaa tvrvtvtgea eesgtlslyv
      121 grsrvqvpvv ngddatavat aikeavngvi tlpfaassda gvvtltarhk glygnelpvc
      181 lnyygsggge ilpaglqvvt eagtagsgap dltaavaamg deafdfiglp fndaasinmm
      241 mtemndssgr wsyarqlygh vytaklgtls elvdagdmhn qqhitlagye ketqspvdel
      301 vasrlareav firndparpt qtgelvgmlp apkgkrfimt eqqtllshgv atayveggtl
      361 riqrsvttyk knaygvadns yldsetlhts ayvlrklksv itgkygrhkl andgtrfgpg
      421 qaivtpavik gellatyrqm eragivenyd lfkqyliver dadnpnrlnt lfppdyvnql
      481 rvfavvnqfr lqyseesa
//
LOCUS       WP_258125748             255 aa            linear   BCT 02-MAR-2025
DEFINITION  N-acetylmuramoyl-L-alanine amidase C-terminal domain-containing
            protein [Bacillus sp. IBL03825].
ACCESSION   WP_258125748
VERSION     WP_258125748.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. IBL03825
  ORGANISM  Bacillus sp. IBL03825
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 255)
  AUTHORS   Kikkawa,H., Fujinami,Y., Suzuki,S. and Yasuda,J.
  TITLE     Identification of the amino acid residues critical for specific
            binding of the bacteriolytic enzyme of gamma-phage, PlyG, to
            Bacillus anthracis
  JOURNAL   Biochem Biophys Res Commun 363 (3), 531-535 (2007)
   PUBMED   17888883
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023545.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12123.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Bacillus sp. IBL03825"
                     /db_xref="taxon:2953580"
     Protein         1..255
                     /product="N-acetylmuramoyl-L-alanine amidase C-terminal
                     domain-containing protein"
                     /calculated_mol_wt=27971
     Region          9..171
                     /region_name="MurNAc-LAA"
                     /note="N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA
                     (also known as peptidoglycan aminohydrolase, NAMLA
                     amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC
                     3.5.1.28) is an autolysin that hydrolyzes the amide bond
                     between N-acetylmuramoyl and L-amino...; cd02696"
                     /db_xref="CDD:119407"
     Site            order(10,24,81,142)
                     /site_type="active"
                     /db_xref="CDD:119407"
     Site            order(10,24,81)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:119407"
     Region          211..254
                     /region_name="CBD_PlyG"
                     /note="PlyG Cell wall binding domain; pfam12123"
                     /db_xref="CDD:338253"
ORIGIN      
        1 mgcfagsggh nqkvpgansq ygiehvedrr fldavakyvq aagwkyvncs devgstkydv
       61 wnnaannhlr vkdsnvdcqf hlnatlggtg cevwlhpsyg nrelaakisk amadafglrd
      121 rgikfstelg winktktgll peicfidnet dmqkyranfd kaakavaevi vgkpiqssgt
      181 sqpntpskqn iiqsgafspy etpdvmgalt svkmtanfkl qsdgltyfis dptsdaqlna
      241 mkeylgrkef wyevk
//
LOCUS       WP_258126186             491 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail sheath C-terminal domain-containing protein [Escherichia
            coli].
ACCESSION   WP_258126186
VERSION     WP_258126186.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 491)
  AUTHORS   Aksyuk,A.A., Kurochkina,L.P., Fokine,A., Forouhar,F.,
            Mesyanzhinov,V.V., Tong,L. and Rossmann,M.G.
  TITLE     Structural conservation of the myoviridae phage tail sheath protein
            fold
  JOURNAL   Structure 19 (12), 1885-1894 (2011)
   PUBMED   22153511
REFERENCE   2  (residues 1 to 491)
  AUTHORS   Xue,Q. and Egan,J.B.
  TITLE     Tail sheath and tail tube genes of the temperate coliphage 186
  JOURNAL   Virology 212 (1), 218-221 (1995)
   PUBMED   7676633
REFERENCE   3  (residues 1 to 491)
  AUTHORS   Temple,L.M., Forsburg,S.L., Calendar,R. and Christie,G.E.
  TITLE     Nucleotide sequence of the genes encoding the major tail sheath and
            tail tube proteins of bacteriophage P2
  JOURNAL   Virology 181 (1), 353-358 (1991)
   PUBMED   1825255
REFERENCE   4  (residues 1 to 491)
  AUTHORS   Arisaka,F., Ishimoto,L., Kassavetis,G., Kumazaki,T. and Ishii,S.
  TITLE     Nucleotide sequence of the tail tube structural gene of
            bacteriophage T4
  JOURNAL   J Virol 62 (3), 882-886 (1988)
   PUBMED   2963141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037565.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17482.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..491
                     /product="phage tail sheath C-terminal domain-containing
                     protein"
                     /calculated_mol_wt=52346
     Region          146..483
                     /region_name="Phage_sheath_1"
                     /note="Phage tail sheath protein subtilisin-like domain;
                     cl01389"
                     /db_xref="CDD:470182"
ORIGIN      
        1 msglhgveti elttgtvavq tvstaviglv gtapdasggv casgtagswl lssaldftak
       61 kagrsgneis vvangstqqn aettaalegn tltitlgtde hgetnatasr vkevvnaled
      121 spvmadtsml nadsvgegvv spftltlsgg edeafpvntp vvvagaltqa gklgasgtly
      181 palrdifdqt galvivvrae skpkaketeq raavikamea ltkskgvtgy qprilvatgy
      241 seddgvakal etyaaklrav ayidspsmvt pqdvvqrrtl fggrvellrp rvsvtddsgq
      301 tvfrpysara aglraridye kgwwwsksnq dvmnitgleq vdtftlgeqn ctanllnmen
      361 istiirhdgf khwgnrlcts hsqlrfesvr rtadviedsv qesmlpyvdr pidrdvaddi
      421 lgsinaymrq lknlgaihgg sawlndelnt aetlaagqly idydfgpksp lerltlrtmi
      481 nnklaqeelt v
//
LOCUS       WP_258126204             317 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Bacillus sp. IBL03825].
ACCESSION   WP_258126204
VERSION     WP_258126204.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. IBL03825
  ORGANISM  Bacillus sp. IBL03825
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 317)
  AUTHORS   Woodson,K. and Devine,K.M.
  TITLE     Analysis of a ribose transport operon from Bacillus subtilis
  JOURNAL   Microbiology (Reading) 140 (Pt 8), 1829-1838 (1994)
   PUBMED   7921236
REFERENCE   2  (residues 1 to 317)
  AUTHORS   Hogg,R.W., Voelker,C. and Von Carlowitz,I.
  TITLE     Nucleotide sequence and analysis of the mgl operon of Escherichia
            coli K12
  JOURNAL   Mol Gen Genet 229 (3), 453-459 (1991)
   PUBMED   1719366
REFERENCE   3  (residues 1 to 317)
  AUTHORS   Adams,M.D., Wagner,L.M., Graddis,T.J., Landick,R., Antonucci,T.K.,
            Gibson,A.L. and Oxender,D.L.
  TITLE     Nucleotide sequence and genetic characterization reveal six
            essential genes for the LIV-I and LS transport systems of
            Escherichia coli
  JOURNAL   J Biol Chem 265 (20), 11436-11443 (1990)
   PUBMED   2195019
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014684.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02653.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Bacillus sp. IBL03825"
                     /db_xref="taxon:2953580"
     Protein         1..317
                     /product="ABC transporter permease subunit"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=33928
     Region          1..303
                     /region_name="TM_PBP1_branched-chain-AA_like"
                     /note="Transmembrane subunit (TM) of Periplasmic Binding
                     Protein (PBP)-dependent ATP-Binding Cassette (ABC)
                     transporters which are involved in the uptake of
                     branched-chain amino acids (AAs), as well as TMs of
                     transporters involved in the uptake of...; cl00454"
                     /db_xref="CDD:444914"
     Site            193..211
                     /site_type="active"
                     /note="TM-ABC transporter signature motif [active]"
                     /db_xref="CDD:119321"
ORIGIN      
        1 mkrmykmhet siilllliyi aivgminpsf vqlnslslmm kssvilvvla igqsfvlftk
       61 nidvsvgsim glsaavcgml lsdgynafls itavillgai igfangigva kfrvpaiimt
      121 lgmlgvirga mliftggkwi edipndfkql ssivilglpi ivwvvliill llyfflrkvp
      181 fgryfyavgd nedgarligi pvnkvkiyaf iisgisaala gcifvmnigf vpnqtgtgie
      241 lqviaaavlg gihlkggtgs ivgaalgalf levissslvf lkipafwnna isgflllliv
      301 ildsvmkkwk aerrmnl
//
LOCUS       WP_258126269             105 aa            linear   BCT 02-MAR-2025
DEFINITION  AEC family transporter, partial [Escherichia coli].
ACCESSION   WP_258126269
VERSION     WP_258126269.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015509.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03547.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..105
                     /product="AEC family transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
     Region          <25..105
                     /region_name="Mem_trans"
                     /note="Membrane transport protein; cl22894"
                     /db_xref="CDD:451441"
ORIGIN      
        1 gstppvfpfi yhcapylmgw dvfitflkli lmplalllvg machlnsehl qmmvlagalp
       61 pafsgiiias rfnvytrtgt aslavsvlgf vvtaplwiyv srlvs
//
LOCUS       WP_258126300             355 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 113 [Bacillus sp. IBL03825].
ACCESSION   WP_258126300
VERSION     WP_258126300.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. IBL03825
  ORGANISM  Bacillus sp. IBL03825
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 355)
  AUTHORS   Lin,H.Y., Chen,C.Y., Lin,T.C., Yeh,L.F., Hsieh,W.C., Gao,S.,
            Burnouf,P.A., Chen,B.M., Hsieh,T.J., Dashnyam,P., Kuo,Y.H., Tu,Z.,
            Roffler,S.R. and Lin,C.H.
  TITLE     Entropy-driven binding of gut bacterial beta-glucuronidase
            inhibitors ameliorates irinotecan-induced toxicity
  JOURNAL   Commun Biol 4 (1), 280 (2021)
   PUBMED   33664385
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 355)
  AUTHORS   Bardy,P., Fuzik,T., Hrebik,D., Pantucek,R., Thomas Beatty,J. and
            Plevka,P.
  TITLE     Structure and mechanism of DNA delivery of a gene transfer agent
  JOURNAL   Nat Commun 11 (1), 3034 (2020)
   PUBMED   32541663
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 355)
  AUTHORS   You,X., Qin,Z., Yan,Q., Yang,S., Li,Y. and Jiang,Z.
  TITLE     Structural insights into the catalytic mechanism of a novel
            glycoside hydrolase family 113 beta-1,4-mannanase from
            Amphibacillus xylanus
  JOURNAL   J Biol Chem 293 (30), 11746-11757 (2018)
   PUBMED   29871927
REFERENCE   4  (residues 1 to 355)
  AUTHORS   Williams,R.J., Iglesias-Fernandez,J., Stepper,J., Jackson,A.,
            Thompson,A.J., Lowe,E.C., White,J.M., Gilbert,H.J., Rovira,C.,
            Davies,G.J. and Williams,S.J.
  TITLE     Combined inhibitor free-energy landscape and structural analysis
            reports on the mannosidase conformational coordinate
  JOURNAL   Angew Chem Int Ed Engl 53 (4), 1087-1091 (2014)
   PUBMED   24339341
REFERENCE   5  (residues 1 to 355)
  AUTHORS   Zhang,Y., Ju,J., Peng,H., Gao,F., Zhou,C., Zeng,Y., Xue,Y., Li,Y.,
            Henrissat,B., Gao,G.F. and Ma,Y.
  TITLE     Biochemical and structural characterization of the intracellular
            mannanase AaManA of Alicyclobacillus acidocaldarius reveals a novel
            glycoside hydrolase family belonging to clan GH-A
  JOURNAL   J Biol Chem 283 (46), 31551-31558 (2008)
   PUBMED   18755688
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046780.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22612.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Bacillus sp. IBL03825"
                     /db_xref="taxon:2953580"
     Protein         1..355
                     /product="glycoside hydrolase family 113"
                     /GO_function="GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /calculated_mol_wt=40865
     Region          36..353
                     /region_name="GH113_mannanase-like"
                     /note="Glycoside hydrolase family 113 beta-1,4-mannanase
                     and similar proteins; cd19608"
                     /db_xref="CDD:381626"
     Site            order(113,119..120,162,193..194,228,277,291,327..328,338)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:381626"
ORIGIN      
        1 mkknkslvsf lgvcmmlfsf cfqgnvqadv ntvqsgkiks gnvtvwevgn vskvladver
       61 lnlntvnvpi qvdipnvtst nmvinqaqkq qaiiliqels krniqvivep fpyiqqgnvg
      121 etewnpsnin dffwnwktvi lqdifhsits kynvyglkia snfvnmeyae gywndtidfv
      181 rkqykgnvly qmnwwltasf dlsyeakfke kinrpylkkv divsidswfe vsgkrnptye
      241 evkqslfatt vynrgqnvvq qleqlhkatg kpvyfggfnv parelglqnp wnpdvsnvfs
      301 kdvqlngwra yrevletkpy fkgfsiwfig shnsthayqi hskeaeavin gwyrk
//
LOCUS       WP_258126314             215 aa            linear   BCT 02-MAR-2025
DEFINITION  conjugal transfer nickase/helicase domain-containing protein,
            partial [Escherichia coli].
ACCESSION   WP_258126314
VERSION     WP_258126314.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 215)
  AUTHORS   Larbig,K.D., Christmann,A., Johann,A., Klockgether,J., Hartsch,T.,
            Merkl,R., Wiehlmann,L., Fritz,H.J. and Tummler,B.
  TITLE     Gene islands integrated into tRNA(Gly) genes confer genome
            diversity on a Pseudomonas aeruginosa clone
  JOURNAL   J Bacteriol 184 (23), 6665-6680 (2002)
   PUBMED   12426355
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019154.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07515.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..215
                     /product="conjugal transfer nickase/helicase
                     domain-containing protein"
     Region          97..205
                     /region_name="TraI_2_C"
                     /note="Putative conjugal transfer nickase/helicase TraI
                     C-term; pfam07515"
                     /db_xref="CDD:429507"
ORIGIN      
        1 svsgtdgaev evrdtlqsat gaeekaleeq slhddtdmll slfsvvddna svpvtagegv
       61 qealvptdnd lshgkyddat fslisgssap evvisegemf inwlkkgvsn geislngkkd
      121 kihivagfvf lpvpgifyef tkaagipadk kddiqasfer lnihkrrdnr rfyfahlcee
      181 penrsrfktl kgylvkgrql ldgqelqdsr ylffp
//
LOCUS       WP_258126356             325 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4179 domain-containing protein [Bacillus sp. IBL03825].
ACCESSION   WP_258126356
VERSION     WP_258126356.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. IBL03825
  ORGANISM  Bacillus sp. IBL03825
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025159.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13786.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Bacillus sp. IBL03825"
                     /db_xref="taxon:2953580"
     Protein         1..325
                     /product="DUF4179 domain-containing protein"
                     /calculated_mol_wt=36556
     Region          1..>58
                     /region_name="RsiW"
                     /note="Transmembrane transcriptional regulator RsiW
                     (anti-sigma-W factor) [Transcription]; COG5662"
                     /db_xref="CDD:444381"
     Region          103..201
                     /region_name="DUF4179"
                     /note="Domain of unknown function (DUF4179); pfam13786"
                     /db_xref="CDD:463985"
     Region          <233..300
                     /region_name="UAE_UbL"
                     /note="Ubiquitin/SUMO-activating enzyme ubiquitin-like
                     domain; cl39046"
                     /db_xref="CDD:476859"
ORIGIN      
        1 mkcydigfiq tyidgelphd irkeftmhld tceacqdllv eisklnqwes vmldeesans
       61 pqeikidieq awktfesrsk ldnvsninhk kqqkkglftn mskkskrfmy tavaaaalft
      121 tamipqvqva atnvasyfsd aitndkvvne giqdengviq dmmkngkyip idekitdqgi
      181 tvhfkelyia dsrisvhyrm ekadgslvpf efdtsglele sdgkingqqe enpeikhegr
      241 lsfihdsddr lpfelmaagk klndvgirdn dkpegvatfv ivtggkddfk qpltldvnin
      301 rigkvigswk geiqidtshl knntn
//
LOCUS       WP_258126376             480 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA-binding protein, partial [Escherichia coli].
ACCESSION   WP_258126376
VERSION     WP_258126376.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 480)
  AUTHORS   Ilangovan,U., Wojciak,J.M., Connolly,K.M. and Clubb,R.T.
  TITLE     NMR structure and functional studies of the Mu repressor
            DNA-binding domain
  JOURNAL   Biochemistry 38 (26), 8367-8376 (1999)
   PUBMED   10387082
REFERENCE   2  (residues 1 to 480)
  AUTHORS   Harshey,R.M., Getzoff,E.D., Baldwin,D.L., Miller,J.L. and
            Chaconas,G.
  TITLE     Primary structure of phage mu transposase: homology to mu repressor
  JOURNAL   Proc Natl Acad Sci U S A 82 (22), 7676-7680 (1985)
   PUBMED   2999776
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014380.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02316.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>480
                     /product="DNA-binding protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
     Region          7..140
                     /region_name="HTH_MerR-SF"
                     /note="Helix-Turn-Helix DNA binding domain of
                     transcription regulators from the MerR superfamily;
                     cl02600"
                     /db_xref="CDD:470628"
     Region          <302..418
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 mfysanelvg lpclpgtvqg vrwtlnrite thpewkrkre gtkafeyrid clpaeaqkvl
       61 rkrlthqvle dtqlpvvveq kaaknvtvrd elevmvkcpe lvlrevqalt dkqkaiadar
      121 illatevhkl reyagmsrta avkhivdgir qealperviv agntanarqg krtgvstgsl
      181 qewysawlma rgdanqllal lapghhkgtp weqvwwlsdf fmfyrswkrp tveyayrefs
      241 awwhekhand agmlaalpsv havrrvlsnv pvivkerfrs tgsawrslnp fvrrdwtslp
      301 vnavwvgdgh cmkmtafnpl tgnifrpevt lvmdagqrfv vgwslslsen viavadalry
      361 gmaqhgipli yysdngggek nrvldaditg ilprlgvehh tgipgnpqgr gvierankgi
      421 pkdvalsfrt ycardadket vmmqqrimqs aikathkgke ltkrqvkard eiptfeqlma
//
LOCUS       WP_258126461             303 aa            linear   BCT 02-MAR-2025
DEFINITION  VENN motif pre-toxin domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_258126461
VERSION     WP_258126461.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 303)
  AUTHORS   Zhang,D., Iyer,L.M. and Aravind,L.
  TITLE     A novel immunity system for bacterial nucleic acid degrading toxins
            and its recruitment in various eukaryotic and DNA viral systems
  JOURNAL   Nucleic Acids Res 39 (11), 4532-4552 (2011)
   PUBMED   21306995
REFERENCE   2  (residues 1 to 303)
  AUTHORS   Aoki,S.K., Diner,E.J., de Roodenbeke,C.T., Burgess,B.R.,
            Poole,S.J., Braaten,B.A., Jones,A.M., Webb,J.S., Hayes,C.S.,
            Cotter,P.A. and Low,D.A.
  TITLE     A widespread family of polymorphic contact-dependent toxin delivery
            systems in bacteria
  JOURNAL   Nature 468 (7322), 439-442 (2010)
   PUBMED   21085179
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016702.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04829.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..303
                     /product="VENN motif pre-toxin domain-containing protein"
     Region          116..167
                     /region_name="PT-VENN"
                     /note="Pre-toxin domain with VENN motif; pfam04829"
                     /db_xref="CDD:428147"
     Region          212..303
                     /region_name="ECs1768"
                     /note="Phage-encoded DNA-binding protein ECs1768, contains
                     HTH and DnaT DNA-binding domains [Mobilome: prophages,
                     transposons]; COG5529"
                     /db_xref="CDD:444280"
ORIGIN      
        1 aqraynngma asgfgtggky qqaiqaataa vqglaggnls aalaggaapy laevvktmtt
       61 dpvtgevnka anvaahavvn aalavaqgnn alagaagaat gevvgmiatq mygkpvsels
      121 etekqtvstl atvaaglagg lvgdsgasav agaqsgkttv ennalgnknd klppiipinp
      181 lpigvegadg eslnggggia kggkskdtqi wtetkkaepv gnayghwtkh gkefpeyqna
      241 kqyvdaahnf mtnpppgtlt ktrsngdtly ynpvtnvfas kdingvprtm fkpekgieyw
      301 nkq
//
LOCUS       WP_258126517             199 aa            linear   BCT 02-MAR-2025
DEFINITION  Ail/Lom family outer membrane beta-barrel protein [Escherichia
            coli].
ACCESSION   WP_258126517
VERSION     WP_258126517.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 199)
  AUTHORS   Miller,V.L., Beer,K.B., Heusipp,G., Young,B.M. and Wachtel,M.R.
  TITLE     Identification of regions of Ail required for the invasion and
            serum resistance phenotypes
  JOURNAL   Mol Microbiol 41 (5), 1053-1062 (2001)
   PUBMED   11555286
REFERENCE   2  (residues 1 to 199)
  AUTHORS   Barondess,J.J. and Beckwith,J.
  TITLE     A bacterial virulence determinant encoded by lysogenic coliphage
            lambda
  JOURNAL   Nature 346 (6287), 871-874 (1990)
   PUBMED   2144037
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018068.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06316.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..199
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /GO_component="GO:0044384 - host outer membrane [Evidence
                     IEA]"
                     /calculated_mol_wt=21678
     Region          1..199
                     /region_name="OM_channels"
                     /note="Porin superfamily. These outer membrane channels
                     share a beta-barrel structure that differ in strand and
                     shear number. Classical (gram-negative) porins are
                     non-specific channels for small hydrophillic molecules and
                     form 16 beta-stranded barrels (16,20)...; cl21487"
                     /db_xref="CDD:473880"
ORIGIN      
        1 mrklyaails aaiclavsga pawasehqst lsagylhalt nvpgsddlng invkyryeft
       61 dtlglvtsfs yagdknrqlt rysdtrwhed svrnrwfsvm vgpsvrvnew fsayamagma
      121 ysrvstfsgd ylrvtdnkgk thdvltgsdd grhsntslaw gagvqfnpte svaidiayeg
      181 sgsgdwrtdg fivgvgykf
//
LOCUS       WP_258126552            1124 aa            linear   BCT 02-MAR-2025
DEFINITION  NEAT domain-containing protein [Bacillus sp. IBL03825].
ACCESSION   WP_258126552
VERSION     WP_258126552.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. IBL03825
  ORGANISM  Bacillus sp. IBL03825
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 1124)
  AUTHORS   Sheldon,J.R. and Heinrichs,D.E.
  TITLE     Recent developments in understanding the iron acquisition
            strategies of gram positive pathogens
  JOURNAL   FEMS Microbiol Rev 39 (4), 592-630 (2015)
   PUBMED   25862688
REFERENCE   2  (residues 1 to 1124)
  AUTHORS   Honsa,E.S., Maresso,A.W. and Highlander,S.K.
  TITLE     Molecular and evolutionary analysis of NEAr-iron Transporter (NEAT)
            domains
  JOURNAL   PLoS One 9 (8), e104794 (2014)
   PUBMED   25153520
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016890.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05031.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1124
                     /organism="Bacillus sp. IBL03825"
                     /db_xref="taxon:2953580"
     Protein         1..1124
                     /product="NEAT domain-containing protein"
                     /calculated_mol_wt=125492
     Region          1..279
                     /region_name="NEAT"
                     /note="Heme-binding NEAT domain [Inorganic ion transport
                     and metabolism]; COG5386"
                     /db_xref="CDD:444149"
     Region          195..446
                     /region_name="NEAT"
                     /note="Heme-binding NEAT domain [Inorganic ion transport
                     and metabolism]; COG5386"
                     /db_xref="CDD:444149"
     Region          481..782
                     /region_name="NEAT"
                     /note="Heme-binding NEAT domain [Inorganic ion transport
                     and metabolism]; COG5386"
                     /db_xref="CDD:444149"
     Region          682..982
                     /region_name="NEAT"
                     /note="Heme-binding NEAT domain [Inorganic ion transport
                     and metabolism]; COG5386"
                     /db_xref="CDD:444149"
     Region          841..857
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          865..881
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          883..899
                     /region_name="FHA beta-helical repeat"
                     /note="FHA beta-helical repeat [structural motif]"
                     /db_xref="CDD:293785"
     Region          911..>1098
                     /region_name="NEAT"
                     /note="Heme-binding NEAT domain [Inorganic ion transport
                     and metabolism]; COG5386"
                     /db_xref="CDD:444149"
ORIGIN      
        1 mnryvkiiva mflmvftfvs tlqplavqaa tqltdgeysi gfkvlkdtsd eesmmnqysv
       61 spgtlkvkdg kkkvsftleh sswitkfete kngqfvatnv isedkekdtr vvefevddve
      121 kvlnakvkvd idflnyhhdy dvrivfdqns itpihveqpn ekedpankpd pnenpdpsqk
      181 pdqkpdpdqq pnsntikdge ysipfkvlkd qtdeeskmnt ymvnpgvlkv engkkkafvt
      241 lksssliknf qtekdgafad akvvsedkek dtrvvefevd dlskkintkv fievasqgyk
      301 qthnvqllfe qdkleqikne ekqpdgdkkp evekpeieti kdgeysipfk vlkdktdees
      361 rmkdklispa vlkvengkkk atvtltdnas iknfqtkkeg sfvdvkvvse dkekntrvve
      421 fevdslsnkl ntkvfievas qnykqthelq lqfnqdklep ikneekqpdg dkkpevekpd
      481 aetmkdgeys infkalkdqt eeismmntyt kspgvlkvkd gkkyvsftlt nsawitkfef
      541 ekkgsfvnas vlsedkkadt rvvevevddl skklnakvkv didsmnyhhf ydiqfafdkg
      601 sikpldnqgg ndnqggndnq ggndnqggnd nqggndnqgg ndnqggndnq ggndnqggnd
      661 nqggnnnqgg nnnqgnntti dpkalkdgey sigfkvlkdk teeismmnty tkspavlkvk
      721 dgkkyvsftl tnstwitkfe fekngsfvna kvlsenkeqn tkvvelevdd lfkklnakvk
      781 vdidamnyhh fydvqfvfdq dsikalgnqg gndnqggndn qggndnqggn dnqggndnqg
      841 gndnqggndn qggndnqggn dnqggndnqg gndnqggndn qggndnqggn dnqggndnqd
      901 gnnqpkvivd pknlvdgqyd ipfkvlkdkt nelskmhdyt vhpaklivkd gkkyiemtlk
      961 nsawitkfqt ennslfadak vvsedknant rvvqfevsdl faklnakvkv dinemnyhhf
     1021 ydvqiqfdtn nigalgtike dpkkdpkndp nnpvitpkvd nikkvdnpdf nrnaddkkkk
     1081 egqkndpkke knsktadtaq lglymvlllg slallvrkyr agrl
//
LOCUS       WP_258126553             878 aa            linear   BCT 02-MAR-2025
DEFINITION  TcfC E-set like domain-containing protein [Escherichia coli].
ACCESSION   WP_258126553
VERSION     WP_258126553.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028277.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16967.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..878
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..878
                     /product="TcfC E-set like domain-containing protein"
                     /calculated_mol_wt=96223
     Region          11..867
                     /region_name="PRK15310"
                     /note="fimbrial outer membrane usher protein TcfC;
                     Provisional"
                     /db_xref="CDD:185210"
ORIGIN      
        1 mkvyvkkmcg lflfaassal ansvppgfet lalgqdeflt vqiegksydv aqvhitpdtl
       61 tflkpddvik qsyfsgmsds dknvvlsflk kplprhdsey tpdvnedvgc iyneesqavv
      121 llinpalkgn ikhtyftesr nnvstafisq qsislshgaq eesvggnghw algtgdkgyv
      181 mgdwdfaknn tlraegyssf rtenlfyrrd lsnmtyvqgg hmnstglndt nggnfplsll
      241 pvpritgirv gstdaylnta hesgaspltv ilteaaridi ykgtrllgtr yeeagvrrld
      301 tqgfpagayp vtlkiyhngq lsrvmtqyfr ntgddgvsht trwflqggea dsgiqtlytr
      361 nnknhsrtei aagvrhelhp gitwteaaqy hdknylmend iswripvfsg yieldggmlt
      421 kkdhlvagqv qttwaagnts lslshyqsym gsenldsryr sesatfdvse grwfgslglt
      481 rsqnalryyn wsqpfygnas tealdwkhnt sergwsatdi mlslgysahy ddinimprmg
      541 vserfarnqn aksvffsltl sryqapsgsn gmssdtslqi naatthqsns melsqrweqe
      601 gdtwknfgvs vsqgdkqqng rvdgewigha gaaaltfsld hyhgesqktv sgqygsnfai
      661 trngffwgeg kgdasrlsgm vvdtrvdnda gvqgdiaevs gssgrtirla qservflplt
      721 qyasnavdid nvaqkgangq ltqggghnel fllpghvklt rlyseatyiy tgrlvrsngt
      781 plsggsilna svpdansngd fvvefshppe tiyalnqgvi ytcpvhfteg fnnirhigtv
      841 scaetavtsl pqnvrksrrt slllamspgk qavatsqs
//
LOCUS       WP_258126615             446 aa            linear   BCT 02-MAR-2025
DEFINITION  FKBP-type peptidyl-prolyl cis-trans isomerase N-terminal
            domain-containing protein [Escherichia coli].
ACCESSION   WP_258126615
VERSION     WP_258126615.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 446)
  AUTHORS   Saul,F.A., Arie,J.P., Vulliez-le Normand,B., Kahn,R., Betton,J.M.
            and Bentley,G.A.
  TITLE     Structural and functional studies of FkpA from Escherichia coli, a
            cis/trans peptidyl-prolyl isomerase with chaperone activity
  JOURNAL   J Mol Biol 335 (2), 595-608 (2004)
   PUBMED   14672666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013509.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01346.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..446
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase
                     N-terminal domain-containing protein"
                     /GO_process="GO:0006457 - protein folding [Evidence IEA]"
                     /calculated_mol_wt=48526
     Region          <81..>282
                     /region_name="GumC"
                     /note="Exopolysaccharide export protein/domain GumC/Wzc1
                     [Cell wall/membrane/envelope biogenesis]; COG3206"
                     /db_xref="CDD:442439"
     Region          183..416
                     /region_name="PRK10902"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     Provisional"
                     /db_xref="CDD:236791"
ORIGIN      
        1 mndglkicrr ilqttggval llwggcagag dnsggvpgil kfaqqyqqqe asaikeggsg
       61 gktdsvarsv gkgeagagst telrrrltlr eqevrqlkke nrglrerlkv lpdtaqdnae
      121 kdkvvaslka eldesrkqle titrkgeqaq etlnaqviel kqqlsrmete sktaaeqagk
      181 ektelqatln tlkaemadmp vvtaemlkpd dmqqtyaagv mlgrdmlnlq aaqqqlglkt
      241 dnrilmagir dalnrkvlln esvldvalqr aeelaqkarl avireqkkag aawlekfrkq
      301 kgvkqaeggf wyrseyagdg efirgddtlv dvvvtekltd gtvvedmdar grvisqvlge
      361 yppvfrealm lmknhgtmel vvppelaygd egyppkvppg stmvytlrve evkpvaepas
      421 gestgknmss lagkndkagr tegvkk
//
LOCUS       WP_258126629            1407 aa            linear   BCT 02-MAR-2025
DEFINITION  S8 family serine peptidase [Bacillus sp. IBL03825].
ACCESSION   WP_258126629
VERSION     WP_258126629.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. IBL03825
  ORGANISM  Bacillus sp. IBL03825
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012311.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00082.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1407
                     /organism="Bacillus sp. IBL03825"
                     /db_xref="taxon:2953580"
     Protein         1..1407
                     /product="S8 family serine peptidase"
                     /GO_function="GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=154766
     Region          105..183
                     /region_name="Inhibitor_I9"
                     /note="Peptidase inhibitor I9; pfam05922"
                     /db_xref="CDD:428674"
     Region          216..672
                     /region_name="Peptidases_S8_subtilisin_Vpr-like"
                     /note="Peptidase S8 family domain in Vpr-like proteins;
                     cd07474"
                     /db_xref="CDD:173800"
     Site            order(225,297,361..363,393,617)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:173800"
     Site            order(225,297,617)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173800"
     Region          444..573
                     /region_name="PA_C5a_like"
                     /note="Protease-associated domain containing proteins like
                     Streptococcus pyogenes C5a peptidase. This group contains
                     various PA domain-containing proteins similar to S.
                     pyogenes C5a, including, i) Vpr, a minor extracellular
                     serine protease from Bacillus...; cd02133"
                     /db_xref="CDD:239048"
     Site            483..485
                     /site_type="active"
                     /note="putative integrin binding motif [active]"
                     /db_xref="CDD:239048"
     Region          719..809
                     /region_name="fn3_6"
                     /note="Fibronectin type-III domain; cl05663"
                     /db_xref="CDD:471288"
     Region          1076..>1173
                     /region_name="Reeler_cohesin_like"
                     /note="Domains similar to the eukaryotic reeler domain and
                     bacterial cohesins; cl14606"
                     /db_xref="CDD:472692"
     Region          1322..1373
                     /region_name="Dockerin_II"
                     /note="Type II dockerin repeat domain; cd14254"
                     /db_xref="CDD:271213"
     Site            order(1327,1329,1331..1333,1335..1336,1338..1340,1342,
                     1365,1369,1372..1373)
                     /site_type="other"
                     /note="cohesin binding interface 1 [polypeptide binding]"
                     /db_xref="CDD:271213"
     Site            order(1332,1339,1342,1357,1359,1361..1363,1365..1366,
                     1369..1370,1372)
                     /site_type="other"
                     /note="cohesin binding interface 2 [polypeptide binding]"
                     /db_xref="CDD:271213"
ORIGIN      
        1 mkkknrfvtg ivtagvlfst alpfnvlaen pinqidsssv qsllsklske qrqalqtldt
       61 npgftispdi ntsssepvni ivefqtapvk inelkqkekg lqaapknika ridqeheefq
      121 kglkrlyqfs psvksgnfqs vqikrsykha ingvaltlpa ntveellrig vvkriwkdye
      181 vklnlpkqae qkapqkltds ipqigvdklh segitgkgik vgvldtgidy nhpdlkdvyk
      241 gyrakpgeds skvdpnsvkg wdfinndadp mettytewqq sgapefddrg ssfytahgth
      301 vagivsaqkk nksdsavkgv apdielynyr vlgpygsgds sgiiaaidks isdgmnvinl
      361 slgddsnnpl dptsiavnna mlsgvvtvva agnsgpnpat lgspgaspfa itvgasdssi
      421 slpklsghag qlqfpnlilf gknftdkied fkgkslpies vgigtpdefs kkdvkgkial
      481 vargtisfde kianakqaga taviiynnvd geipnyiges tkyipafrlt kedgeklkaq
      541 ieqgktsltf deinyiqteg dhladfssrg pvtsnddikp ditapgvavl stvpeyindp
      601 qegenydvsy ermqgtsmas phiagvaali lqehpeyspf dvkaslmnta ddlkekysvy
      661 evgagrvday nsvhtetsfk vldttktivn devievpeet gsiafgkyyq kdgesleqkr
      721 kikvenrnkq ekkefkteis ytpassaind atangvkvst setitidagk sdeieakini
      781 pagakqgrye gyihitntkn keetyqipfs irvsepgien allsrktist dtskfnpyre
      841 sylhgafqln seletldliv kdsktnkalg figmlntsgl ktdvyyylds ffngrvypft
      901 ndpakpigde kidlpegdyt iefvgydkag karvkgdyvv idntppevkl tglqpgiyel
      961 neenytvedg kkalwikgnv ydsnvdylkg kgfnitqean gvmyydyspy lhkflpinan
     1021 gdfkvgitpe sfkvegpmnt gvyifdyata gpdypsgvnn ywfipqgaqy akasydkkel
     1081 ykddeftvtl nakhvkqfis gefnvkflek nfkfanakln pafekllsek ggtakvnepk
     1141 leegsvtvgg aiddknfagl dgdfpfidvt fkvendefye anaqldlavf aywkqgesep
     1201 nrmrvlqdqt fsvmslnsla egnikpgafl nergyldekf dytklgvkvy atdsyrhkfe
     1261 gsldkygyfk lnglpvnkrd ynlyveipgh ltsrlttklg tekdgkllgq yyyarldesl
     1321 agdvngdkvi dikdaeiias nydkkglsvk dgdlnkdgiv dekdirfvek nflkkgpdas
     1381 nsktpveksk sgtladilkk lgltpkk
//
LOCUS       WP_258126634             293 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Bacillus sp. IBL03825].
ACCESSION   WP_258126634
VERSION     WP_258126634.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. IBL03825
  ORGANISM  Bacillus sp. IBL03825
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025107.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13730.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Bacillus sp. IBL03825"
                     /db_xref="taxon:2953580"
     Protein         1..293
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=34010
     Region          8..>126
                     /region_name="COG3355"
                     /note="Predicted transcriptional regulator
                     [Transcription]"
                     /db_xref="CDD:442583"
     Region          34..92
                     /region_name="HTH_36"
                     /note="Helix-turn-helix domain; pfam13730"
                     /db_xref="CDD:463970"
ORIGIN      
        1 mgslynlmkp ysefrskeef ntyqrqilkc yrfelnktdt tiihflgkya vnekqktvgv
       61 acplmetiat kvgksirtvr rsiakleelg iikrvatker hkrggysanl yvfltsaidr
      121 mddrmklsac esedrvdgcs kneqkseget iifknipqik enrketyeld etycrhdipk
      181 pfiyalvpmt rnpkkinifw skvelaykks glleqgvlle qiladeevyg nfiwrvksvv
      241 raykygeirk nvkallystv rdlflevgle wgaavrrrkg illfdpfkke pcv
//
LOCUS       WP_258126676             292 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Escherichia coli].
ACCESSION   WP_258126676
VERSION     WP_258126676.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 292)
  AUTHORS   Yeo,C.C. and Poh,C.L.
  TITLE     Characterization of IS1474, an insertion sequence of the IS21
            family isolated from Pseudomonas alcaligenes NCIB 9867
  JOURNAL   FEMS Microbiol Lett 149 (2), 257-263 (1997)
   PUBMED   9141667
REFERENCE   2  (residues 1 to 292)
  AUTHORS   Solinas,F., Marconi,A.M., Ruzzi,M. and Zennaro,E.
  TITLE     Characterization and sequence of a novel insertion sequence,
            IS1162, from Pseudomonas fluorescens
  JOURNAL   Gene 155 (1), 77-82 (1995)
   PUBMED   7698671
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013828.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01695.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..292
                     /product="ATP-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=32961
     Region          86..289
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            151..158
                     /site_type="other"
                     /note="Walker A motif"
                     /db_xref="CDD:99707"
     Site            order(152..159,216,250)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:99707"
     Site            212..217
                     /site_type="other"
                     /note="Walker B motif"
                     /db_xref="CDD:99707"
     Site            267
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:99707"
ORIGIN      
        1 mmtfnlreqq trlqarmdel rsemafaetg ekpwpyrscr mregrgycek hgeyhahilv
       61 wgerngedre kishcphcls teindvimel sslkaeeltd nagialrfrd cefenyqein
      121 pdaarnlaac rryaenwadv lengtnlvlt gscgtgknhl avamakyvir nylasveitd
      181 vmrltravkn cwrndsekta deviehyasl dlliidevgv qfgsaaemai lqeiinarye
      241 silptilisn lspkalwayi spriadrvtd ggrnllsfnw psyrahaggv aa
//
LOCUS       WP_258126714             459 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: zinc ribbon domain-containing protein [Bacillus].
ACCESSION   WP_258126714
VERSION     WP_258126714.1
KEYWORDS    RefSeq.
SOURCE      Bacillus
  ORGANISM  Bacillus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae.
REFERENCE   1  (residues 1 to 459)
  AUTHORS   Isernia,C., Malgieri,G., Russo,L., D'Abrosca,G., Baglivo,I.,
            Pedone,P.V. and Fattorusso,R.
  TITLE     Zinc Fingers
  JOURNAL   Met Ions Life Sci 20 (2020)
   PUBMED   32851833
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11468645
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Bacillus"
                     /db_xref="taxon:1386"
     Protein         1..459
                     /product="zinc ribbon domain-containing protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=52044
     Region          1..437
                     /region_name="YvbJ"
                     /note="Uncharacterized protein YvbJ, contains N-terminal
                     Zn ribbon domain [Function unknown]; COG4640"
                     /db_xref="CDD:443678"
ORIGIN      
        1 mkfcgtckkn vadhlnfcpe cgskvevivd ntvasytevq setkpakskk nlfliigfai
       61 iaillfgayk fgaykfskek qinvmieafq kkditaidef vkandsslki ktedikaymr
      121 ylkenpsynk qllsylqket vdqkltkdkn sfkdgeiiee gkewflypky kfsmksyyms
      181 vsttaknaei yvndkketel ssdktskelg pyfpgtyvvk atakteltel etekevdlad
      241 eqgekvnvdl slegkyvsis sdendatvfv ngkkrgklsy gnyklgpvst detvevhlek
      301 ttdfgvikse sikigdqsty ylkfpketss savgdfvrnh iynnvraisl ndfsliendy
      361 dksgksyked rdyiqylhkk gitedlltmd vrnverqsat kykvttyeey hirygdgsvk
      421 fksfnndhiv tvngngkvly hslgandtlk seevsgptr
//
LOCUS       WP_258126681             294 aa            linear   BCT 02-MAR-2025
DEFINITION  Kiwa anti-phage protein KwaB-like domain-containing protein
            [Escherichia coli].
ACCESSION   WP_258126681
VERSION     WP_258126681.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 294)
  AUTHORS   Doron,S., Melamed,S., Ofir,G., Leavitt,A., Lopatina,A., Keren,M.,
            Amitai,G. and Sorek,R.
  TITLE     Systematic discovery of antiphage defense systems in the microbial
            pangenome
  JOURNAL   Science 359 (6379) (2018)
   PUBMED   29371424
REFERENCE   2  (residues 1 to 294)
  AUTHORS   Cuozzo,S.A., Sesma,F., Palacios,J.M., de Ruiz Holgado,A.P. and
            Raya,R.R.
  TITLE     Identification and nucleotide sequence of genes involved in the
            synthesis of lactocin 705, a two-peptide bacteriocin from
            Lactobacillus casei CRL 705
  JOURNAL   FEMS Microbiol Lett 185 (2), 157-161 (2000)
   PUBMED   10754241
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16162.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..294
                     /product="Kiwa anti-phage protein KwaB-like
                     domain-containing protein"
                     /calculated_mol_wt=32662
ORIGIN      
        1 malfavidnt iatrivrvel datastsvta ifqqqrqyfe shhnnmipfy agytpkhsec
       61 feiqnftdsa rlidavnrpt avpiwdpsqi digyikalfv gvdapanpni ialqtfnkkq
      121 ildtsksffg klfaskttfs kangigfnvd dklvaiiind tirfksffnl rsifdmssyf
      181 saatdqelna fsqlsvfstp qgfdlksvad tvirnkvtli nqtgmltppn mskfkseaak
      241 vnfplqtiiv ggvekivmps skkeikalld fleediwvsg isgrrfksns krpi
//
LOCUS       WP_258126726             682 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6270 domain-containing protein [Bacillus sp. IBL03825].
ACCESSION   WP_258126726
VERSION     WP_258126726.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. IBL03825
  ORGANISM  Bacillus sp. IBL03825
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039710.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19786.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Bacillus sp. IBL03825"
                     /db_xref="taxon:2953580"
     Protein         1..682
                     /product="DUF6270 domain-containing protein"
                     /calculated_mol_wt=79661
     Region          431..659
                     /region_name="DUF6270"
                     /note="Family of unknown function (DUF6270); pfam19786"
                     /db_xref="CDD:466185"
ORIGIN      
        1 mgvrieklgy nlkkgdmkii gtstagsgrl ilrkksnhrd fefplevklg evlqgekfqi
       61 dinlksilek qglnndtvwl iymisgeney vvkvkeniee qfeyyygens ifklipyiak
      121 dgvlafytrg lelapfvkkm eylngkllln illtgkdnky lkeekiklif krrnqvnmaf
      181 hgtsisttyi piikesmdit mdiageipyi nqdketcwdv fvnicskdgn ecynlpletd
      241 svvkeqafry tqlkvnnlsy ikpyitgdnr laiyqsnilh kvraidiied nesikidigl
      301 eifnnqkide lnlvikrrek tgngyeyyee fiydveesgd kyiarinkks lshkhilrdk
      361 evwdffirlk sgnnksdlql niskqykkkf syfdicykdk nmegklfing syqlslytid
      421 gknrcairva vlgtcfsrna fnssqyfnpd ykkiyecvyt qfhsslislv skpvsldike
      481 lenikesdrk fvevdfdksf fnklkeseae ylildlysda sksilkidsd ryiscsyile
      541 dskyikklen skiidhtnnd eyfeiwkgav gdfiqklksi lpedkiilnk grftpiyfde
      601 nrevksfsdp qlisrnnhfw drldnyvmhl ipkakvidlt ntsyigdaty pfgksfshye
      661 sgyykeflnr lnslvisdrl sr
//
LOCUS       WP_258126745              36 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2786 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_258126745
VERSION     WP_258126745.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022432.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10979.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..36
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>36
                     /product="DUF2786 domain-containing protein"
ORIGIN      
        1 menkskyiak ikkllrlarg tsspeeaana iakaqa
//
LOCUS       WP_258126781             330 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter permease subunit [Bacillus sp. IBL03825].
ACCESSION   WP_258126781
VERSION     WP_258126781.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. IBL03825
  ORGANISM  Bacillus sp. IBL03825
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 330)
  AUTHORS   Reizer,J., Reizer,A. and Saier,M.H. Jr.
  TITLE     A new subfamily of bacterial ABC-type transport systems catalyzing
            export of drugs and carbohydrates
  JOURNAL   Protein Sci 1 (10), 1326-1332 (1992)
   PUBMED   1303751
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024091.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12679.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Bacillus sp. IBL03825"
                     /db_xref="taxon:2953580"
     Protein         1..330
                     /product="ABC transporter permease subunit"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=37370
     Region          <21..>104
                     /region_name="PRK00145"
                     /note="putative inner membrane protein translocase
                     component YidC; Provisional; cl00489"
                     /db_xref="CDD:469790"
     Region          <106..265
                     /region_name="NosY"
                     /note="ABC-type transport system involved in multi-copper
                     enzyme maturation, permease component [Posttranslational
                     modification, protein turnover, chaperones]; COG1277"
                     /db_xref="CDD:440888"
ORIGIN      
        1 mrefanlvln esekiyrkkr ifvvmlilai liplfvyaqy revettqkrl gttdwkvslq
       61 qqivdsqnrl nnsrlpeewr dwlkirveqq qyyldhdinp mapgaptfvr afieqgitlf
      121 ipllvmivai divsgersdg tmkmlltrpi rrwkillsky vtmlffisli lllvglfayv
      181 lsglvfgysg wnlpvltgfv idketlntnf vhlipqwqyi lmayglawfv aivvgtisfm
      241 vsvlirntpa gmgvmlaali aggilssfat swegakyifs vnlsltdyls gklpalqgls
      301 mgfslmnltv wavvsliisf vvftkqdmvn
//
LOCUS       WP_258126804             230 aa            linear   BCT 02-MAR-2025
DEFINITION  prophage tail fiber N-terminal domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_258126804
VERSION     WP_258126804.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019996.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08400.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>230
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
     Region          1..119
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
     Region          <100..230
                     /region_name="MARTX_Nterm"
                     /note="MARTX multifunctional-autoprocessing
                     repeats-in-toxin holotoxin N-terminal region; NF012221"
                     /db_xref="CDD:467957"
ORIGIN      
        1 ipmsgchiil ksrvntsevv mrtvadvvtg ncgeycfkaq tgkycvylkq dwrdeycvgh
       61 itvypestpg tlndfltvfd eddlkpdvvk rfeemvaqaq qsaeavaedk qrvaqlasev
      121 eqnagqvqqg vqsvtdavkq aqqaaddsas saeesknnad naalseqnak scadnaagsa
      181 qqtaqdvkat aaarddaerf adeaqknaaa taedrnatae dvrlsgqnae
//
LOCUS       WP_258126816              85 aa            linear   BCT 02-MAR-2025
DEFINITION  Arm DNA-binding domain-containing protein, partial [Escherichia
            coli].
ACCESSION   WP_258126816
VERSION     WP_258126816.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12167.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>85
                     /product="Arm DNA-binding domain-containing protein"
     Region          7..70
                     /region_name="Arm-DNA-bind_2"
                     /note="Arm DNA-binding domain; pfam12167"
                     /db_xref="CDD:432377"
ORIGIN      
        1 mdkvkyptgv enhggtlriw fnfkgkrvre nlgvpdtakn rkiagelrts vcfairtgnf
       61 dyaaqfpdsp nlkafgvnkk eitvk
//
LOCUS       WP_258126850             127 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6262 family protein [Bacillus sp. IBL03825].
ACCESSION   WP_258126850
VERSION     WP_258126850.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. IBL03825
  ORGANISM  Bacillus sp. IBL03825
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 127)
  AUTHORS   Bastos,M.C. and Murphy,E.
  TITLE     Transposon Tn554 encodes three products required for transposition
  JOURNAL   EMBO J 7 (9), 2935-2941 (1988)
   PUBMED   2846290
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040041.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19776.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Bacillus sp. IBL03825"
                     /db_xref="taxon:2953580"
     Protein         1..127
                     /product="DUF6262 family protein"
                     /calculated_mol_wt=14815
     Region          8..120
                     /region_name="DUF6262"
                     /note="Family of unknown function (DUF6262); pfam19776"
                     /db_xref="CDD:466180"
ORIGIN      
        1 mntnnyknte giknyaklks eltlskvdqa iqiliknkek infnsvsita gvsksylynh
       61 ldireridkl reqqkrlpsp kqvkyeitdt nkdillaarn krikqleden krlkkelmhl
      121 rgkiyeg
//
LOCUS       WP_258126882              27 aa            linear   BCT 02-MAR-2025
DEFINITION  M15 family metallopeptidase, partial [Escherichia coli].
ACCESSION   WP_258126882
VERSION     WP_258126882.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024929.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13539.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..27
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..27
                     /product="M15 family metallopeptidase"
                     /GO_function="GO:0008233 - peptidase activity [Evidence
                     IEA]"
     Region          <4..26
                     /region_name="Peptidase_M15"
                     /note="Metalloproteases including zinc D-Ala-D-Ala
                     carboxypeptidase, L-Ala-D-Glu peptidase,
                     L,D-carboxypeptidase, bacteriophage endolysins, and
                     related proteins; cl38918"
                     /db_xref="CDD:453889"
ORIGIN      
        1 aaelgtaiew ggdwrtlkdg phfqlkr
//
LOCUS       WP_258126915              74 aa            linear   BCT 02-MAR-2025
DEFINITION  transposase zinc-binding domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_258126915
VERSION     WP_258126915.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025677.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14319.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>74
                     /product="transposase zinc-binding domain-containing
                     protein"
     Region          13..>74
                     /region_name="transpos_IS91"
                     /note="IS91 family transposase; NF033538"
                     /db_xref="CDD:468069"
ORIGIN      
        1 mtrsggdfqp rplkrlftan qcwtsfldag glrdieveav tkmlacgtri pgvkeyncdk
       61 pdcphvryvt nscg
//
LOCUS       WP_258126138             440 aa            linear   BCT 02-MAR-2025
DEFINITION  NfrA family protein, partial [Escherichia coli].
ACCESSION   WP_258126138
VERSION     WP_258126138.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 440)
  AUTHORS   Kiino,D.R., Singer,M.S. and Rothman-Denes,L.B.
  TITLE     Two overlapping genes encoding membrane proteins required for
            bacteriophage N4 adsorption
  JOURNAL   J Bacteriol 175 (21), 7081-7085 (1993)
   PUBMED   8226649
REFERENCE   2  (residues 1 to 440)
  AUTHORS   Kiino,D.R., Licudine,R., Wilt,K., Yang,D.H. and Rothman-Denes,L.B.
  TITLE     A cytoplasmic protein, NfrC, is required for bacteriophage N4
            adsorption
  JOURNAL   J Bacteriol 175 (21), 7074-7080 (1993)
   PUBMED   8226648
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024679.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13283.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..440
                     /product="NfrA family protein"
     Region          <24..440
                     /region_name="PRK09782"
                     /note="bacteriophage N4 receptor, outer membrane subunit;
                     Provisional"
                     /db_xref="CDD:236624"
     Region          61..91
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          96..124
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          130..154
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 ekqkgsrgir rgqwyrlvfq fpirglgsna lywwlhaqry ipgqpelaln dltrsiniap
       61 sanayvarat iyrqrhnvpa avsdlraale lepnnsniqa algyalwdsg diaqsremle
      121 qahkglpddp alirqlayvn qrlddmpatq yyarlviddi dnqalitplt peqnqqrfnf
      181 rrlheevgrr wtfsfdssig lrsgamstan nnvggaapgk syrsygqlea eyrigrnmll
      241 egdllsvysr vfadtgengv mmpvknpmsg tglrwkplrd qifflaveqq lplngqngas
      301 dtmlrasasf fnggkysdew hpngsgwfaq nlyldaaqyi rqdiqawtad yrvswhqkva
      361 ngqtiepyah vqdngyrdkg tqgaqlggvg vrwniwtget hydawphkvs lgveyqhtfk
      421 ainqrngern nafltigvhw
//
LOCUS       WP_258127042              84 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6440 family protein [Bacillus sp. IBL03825].
ACCESSION   WP_258127042
VERSION     WP_258127042.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. IBL03825
  ORGANISM  Bacillus sp. IBL03825
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039785.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20037.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Bacillus sp. IBL03825"
                     /db_xref="taxon:2953580"
     Protein         1..84
                     /product="DUF6440 family protein"
                     /calculated_mol_wt=8564
     Region          29..79
                     /region_name="DUF6440"
                     /note="Family of unknown function (DUF6440); pfam20037"
                     /db_xref="CDD:466268"
ORIGIN      
        1 mkkligvalf gaiilgecgd sgvgaslgrl evigkdsvgk gpsgeitifk dkkmgcqymh
       61 tdaasgpmit pvlnqdgkpd ciqe
//
LOCUS       WP_258127138             470 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Bacillus sp. IBL03825].
ACCESSION   WP_258127138
VERSION     WP_258127138.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. IBL03825
  ORGANISM  Bacillus sp. IBL03825
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024700.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13304.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Bacillus sp. IBL03825"
                     /db_xref="taxon:2953580"
     Protein         1..470
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=53477
     Region          6..416
                     /region_name="COG4637"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443675"
ORIGIN      
        1 mnkkirvsev eiqnfknvin gkitfpsskr qsfngadvlg iygqngsgkt avieafeils
       61 kllkgkeldn nltrlinqdt dtatltftfl ieidnekyel vycfeitkyk ndnfenkdfe
      121 npksediiyv skeelkykql kkgarpkiii qysrrderda lspktlfnkv ksnktellis
      181 ykvntqlafk ertsflfrke gmeftkeifd advyelipil kntfannlfi innkqsslil
      241 anviipvhyk kqdfnkgetg ygviilgtep rkmsrdvfdk tynmlkaisk vlkeiipglt
      301 velrelgeqt lndgdvgvra eliairdgia lpialesdgi kklisilssl ivmyndpnac
      361 ivideldagi fefllgevvk ilndsgkgql lftshnlrll evlekdnlvf tsinpeqryi
      421 nlkgiketnn irdvyiraiq lgndeesvye atdrydimda feeagelnfg
//
LOCUS       WP_258127150             874 aa            linear   BCT 02-MAR-2025
DEFINITION  binary toxin-like calcium binding domain-containing protein
            [Bacillus sp. IBL03825].
ACCESSION   WP_258127150
VERSION     WP_258127150.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. IBL03825
  ORGANISM  Bacillus sp. IBL03825
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015460.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03495.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..874
                     /organism="Bacillus sp. IBL03825"
                     /db_xref="taxon:2953580"
     Protein         1..874
                     /product="binary toxin-like calcium binding
                     domain-containing protein"
                     /calculated_mol_wt=98752
     Region          48..181
                     /region_name="PA14"
                     /note="domain in bacterial beta-glucosidases other
                     glycosidases, glycosyltransferases, proteases, amidases,
                     yeast adhesins, and bacterial toxins; smart00758"
                     /db_xref="CDD:214807"
     Region          235..304
                     /region_name="Binary_toxB"
                     /note="Clostridial binary toxin B/anthrax toxin PA
                     Ca-binding domain; pfam03495"
                     /db_xref="CDD:367526"
     Region          307..513
                     /region_name="Binary_toxB_2"
                     /note="Clostridial binary toxin B/anthrax toxin PA domain
                     2; pfam17475"
                     /db_xref="CDD:435917"
     Region          516..616
                     /region_name="Binary_toxB_3"
                     /note="Clostridial binary toxin B/anthrax toxin PA domain
                     3; pfam17476"
                     /db_xref="CDD:375198"
     Region          <671..737
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; cl19911"
                     /db_xref="CDD:418717"
     Region          <784..873
                     /region_name="Fve"
                     /note="Fungal immunomodulatory protein Fve; pfam09259"
                     /db_xref="CDD:401265"
ORIGIN      
        1 mntitfykcl tstallglli apnasyaqtd emnksqspqq evtidarqgl mgyyyndnnf
       61 kepvliapev ngdlkiekse ikdlvqedkq niqsvrwigy ikpsktaeyl lstssdervi
      121 mqlddqivin qtkmtkkvkl ekdklyqvki eyrpetkmss nnlvelqlyw nnspetteli
      181 ptenlmlpdf speeinnsfi pkqnlfesnt nnkvqkrslk aseddeytdt dddsiydswe
      241 engytvqqkm avkwdesmkd kgykkyvsnp yeshtvgdpy tdfekasgdm drgvkaearn
      301 plvaaypvvg vgmekmiise fnevtkekge svstetsnsn teentsgiea svgfdglsin
      361 gqvttsfsht ssntttvens sekdwseaig mnkgesaaln anvryyntgt apiydaqptt
      421 nlilgtdtlh tirvrqnqia ntlapgksyp ekglgpiald qlddegtnif mnydqlrkiq
      481 ngeklkletm qtsglygikd vdgsikkdss qewapvitqi enssanliln ignetlerrv
      541 aakdytdped kkpevtigea ikiafgctee dgqiyyndml lnesavgfiy dektaqeias
      601 qleqmdnkki ydvklkrgmn imiqkpvlys sgdnhdetgw lgatlewvpg gttgramklq
      661 pnqevstsat klkpnttytl styakvdssn kndkqkvyle aygqgddghk rektpkkeve
      721 idgtkyqrie ltfktsqypm hfqglfignt gkqpilfddf tlvewktepi sekqvredhp
      781 vkewmedkkm gyvngiqfsr vptyqkyqyk wvvsggnfek dygpydirnl esdkslkinf
      841 pdynngfgip vtsvikmyav dpishkeylv akwn
//
LOCUS       WP_258127267              43 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3954 domain-containing protein [Bacillus thuringiensis].
ACCESSION   WP_258127267
VERSION     WP_258127267.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024528.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13128.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..43
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         1..43
                     /product="DUF3954 domain-containing protein"
                     /calculated_mol_wt=4844
     Region          <1..39
                     /region_name="DUF3954"
                     /note="Protein of unknown function (DUF3954); pfam13128"
                     /db_xref="CDD:315731"
ORIGIN      
        1 myivvdgkin feeppksgyg qqvlywvkgk vshtqttitk kfk
//
LOCUS       WP_258127280              39 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2501 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_258127280
VERSION     WP_258127280.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022159.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10696.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..39
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..39
                     /product="DUF2501 domain-containing protein"
     Region          <1..38
                     /region_name="DUF2501"
                     /note="Protein of unknown function (DUF2501); cl08197"
                     /db_xref="CDD:447582"
ORIGIN      
        1 ktkdgqqlnl dnigttplae kvktkacdlv lkqglnfis
//
LOCUS       WP_258127325              84 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein, partial [Bacillus thuringiensis].
ACCESSION   WP_258127325
VERSION     WP_258127325.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         1..>84
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
     Region          11..>84
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mttnkdyiry irekvghdli flnfaggivy nerneillqk rgdrnewglp ggamelgesl
       61 eetakreile etglnveveh ligv
//
LOCUS       WP_258127329            1599 aa            linear   BCT 02-MAR-2025
DEFINITION  restriction endonuclease fold toxin [Escherichia coli].
ACCESSION   WP_258127329
VERSION     WP_258127329.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 1599)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026983.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15647.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..1599
                     /product="restriction endonuclease fold toxin"
                     /calculated_mol_wt=178129
     Region          <252..305
                     /region_name="PAAR_RHS"
                     /note="proline-alanine-alanine-arginine (PAAR) domain,
                     also containing C-terminal Rearrangement hotspot (Rhs)
                     extensions; cd14742"
                     /db_xref="CDD:269827"
     Region          393..454
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
     Region          553..593
                     /region_name="YD_repeat_2x"
                     /note="YD repeat (two copies); TIGR01643"
                     /db_xref="CDD:273728"
     Region          <592..1470
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
     Region          1493..1596
                     /region_name="Tox-REase-3"
                     /note="Restriction endonuclease fold toxin 3; pfam15647"
                     /db_xref="CDD:373988"
ORIGIN      
        1 msegpggpqg ataggtlamr mlsqqamvas qmkraandka iaqmlaakks gppaarlgde
       61 iqhksflgal agavlgaivt iaegclimta catgpyalvl vpalmyasyk asdyveekqn
      121 qleswinsfc dtdgaintgs envkingkpa araavtlppp pppgaipevp qgepswgdia
      181 tdllesaaek avplakawgn avitltdsna gfmdrvsaga sllfpagpvl mefatmvggr
      241 geikkdvdfp eagedtalcd kenkppriaq gssnvfinnq paarkgdkle csaaivegsp
      301 dvfiggeqvt yldiqpefpp wqrmilggit iasyllppag llgklgnlak lgklgnllgk
      361 sgkllgaklg allsrtknal kntynvlkkf ikdpvdpvtg aycdertdft lgqtlplsft
      421 rfhcsvlplh gltgvgwsds sseyawvreq gkrvdiislg atlnfafdge sdtavnpyha
      481 qyilrrrddy lelfdrdals srffydafpg mrlrhpvtdd tsddrlahsp adrmymlggm
      541 sdtasnritf erdsqyritg vshtdgirlk ltyhasgylk aihrtdngiq tlatyeqdar
      601 grlteadarl dyhlfyeyda adriirwsdn dqtwsrftyd eqgrcvtvtg aegyynatld
      661 ygdgcttltd gkgthryyyd pdgnilreea pdgstttyew defhhllarh spagrvekfe
      721 ynaahgqlsr ytaadgaewq yryderglls nitdpagqtw tqqcderglp vslvspqgee
      781 trlaytpqgl lsgifrqder rlgieydhhn rpetltdvmg rehhteysgh dlpvkmrgpg
      841 gqsvrlqwqq hhklsgiera gtgaegfryd rhgnllaytd gngvvwtmey gpfdlpvart
      901 dgeghrwqyr ydkdtlqlte vinpqgesyr yildncgrvt eerdwggvvw ryrydadglc
      961 tarvngleet ilysrdaagr laevitpegk tqyaydksgr ltgifspdgt sqrtgyderg
     1021 rvnvttqgrr aieyhypdeh tvircilppe derdrhpdes llkttyryna ageltevilp
     1081 gdetltfsrd eagrevfrhs nrgfaceqgw naasqlvtqr agffpeeatw ggllpslvre
     1141 yrydsagnvs avtsredygr etrreyrldr ngqvtavtas gtglgygegd esygydscgy
     1201 lkaqsagrhr iseetdqyag ghrlkqagnt qydydaagrm vsrtkhrdgy rpeterfrwd
     1261 srdqltgycs aqgelweyrh dasgrrtekr cdrkkirfty lwdgdsiaei reyrddklys
     1321 vrhlvfngfe lisqqfsrvr qphpsvapqw vtrtnyavsd ltgrplmlfn segktvwrpg
     1381 qtslwglals lpadtdypdp rgeldpeaap gllyagqwqd aesglcynrf ryyepetgmy
     1441 lvsdplglqg geqtyryvpn plgyidplgl aktsvpaeki slsdkardlf rqgkvreald
     1501 vhyedlvrrk lggisqeiag reydvvtdki iaqvkrtyss idnpknflsk strtqikkti
     1561 elaeeqgkea qfwfkygvsp kvreyieskg gkvilgmgn
//
LOCUS       WP_258127410             498 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein [Achromobacter anxifer].
ACCESSION   WP_258127410
VERSION     WP_258127410.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 498)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..498
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=51937
     Region          38..491
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     Site            order(160..164,172,187,189..190,236..239,242,245..246,
                     260..262,295,396,398,424,462)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143395"
     Site            order(164,260,292,295)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143395"
ORIGIN      
        1 magkthktas gdvqlpanng vyydggwhap vserwtdvaa pgtgerlmav adagaedvar
       61 aasaarngar awrrtaplar aatlrkmaqr lrenarelal ldaldcgnpv semgsdvmva
      121 aalldffagl vtelkgdtip mghdaldyte repvgvvari vaynhpllfa mgklaaplaa
      181 gnaviikppv qaplsalrca eligdllppg vfslvpggad agaalaaspd vdmiglvgsi
      241 ptgrrvmqaa aarlkpvale lggknafiac pdvapslaar aivdgmnftw cgqscgstsr
      301 afvhrsiyde vcaqvvqaca afvpgdptdp attmgamisr ehrdrvkqai dtavaqgarl
      361 iagggvpreg vpaggfylep tvfadvsaas plateeffgp vlalipwdde qemlsavhsl
      421 dvgltaaiwt adlarahrla reidagfvwv nevgkhflga pyggvkqsgi grdecigemi
      481 sftreknvhi nfrpvspt
//
LOCUS       WP_258127524             219 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail tube protein [Achromobacter anxifer].
ACCESSION   WP_258127524
VERSION     WP_258127524.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 219)
  AUTHORS   Pell,L.G., Cumby,N., Clark,T.E., Tuite,A., Battaile,K.P.,
            Edwards,A.M., Chirgadze,N.Y., Davidson,A.R. and Maxwell,K.L.
  TITLE     A conserved spiral structure for highly diverged phage tail
            assembly chaperones
  JOURNAL   J Mol Biol 425 (14), 2436-2449 (2013)
   PUBMED   23542344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF027775.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF16460.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..219
                     /product="phage tail tube protein"
                     /calculated_mol_wt=22357
     Region          31..97
                     /region_name="E1_FCCH"
                     /note="Ubiquitin-activating enzyme E1 FCCH domain;
                     pfam16190"
                     /db_xref="CDD:465054"
     Region          88..213
                     /region_name="Phage_TTP_12"
                     /note="Lambda phage tail tube protein, TTP; cl11463"
                     /db_xref="CDD:472191"
ORIGIN      
        1 maqtaisaqk skleisgtng aaknitgvql snpvvitata hglklgdvvt iagivgttql
       61 nglqavvqyv tattvalani naaamteyts ggtltpvqwt kigglksfsg fdgqaneidt
      121 tdldsdaeei mlglarygsf tielnkkfdd ttaaedpgql alaaahtsgg rrsfrltlpn
      181 sktrtfdayv ranplsggvd avatssvplr itgpvlsgg
//
LOCUS       WP_258127545             554 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail tip lysozyme [Achromobacter anxifer].
ACCESSION   WP_258127545
VERSION     WP_258127545.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 554)
  AUTHORS   Xiang,Y., Morais,M.C., Cohen,D.N., Bowman,V.D., Anderson,D.L. and
            Rossmann,M.G.
  TITLE     Crystal and cryoEM structural studies of a cell wall degrading
            enzyme in the bacteriophage phi29 tail
  JOURNAL   Proc Natl Acad Sci U S A 105 (28), 9552-9557 (2008)
   PUBMED   18606992
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037025.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18013.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..554
                     /product="phage tail tip lysozyme"
                     /calculated_mol_wt=57678
     Region          347..468
                     /region_name="Phage_lysozyme2"
                     /note="Phage tail lysozyme; pfam18013"
                     /db_xref="CDD:465617"
ORIGIN      
        1 matiidallv tagfepkrfa adsfsgavsl aqmaqnldms terlsawqka aeraggtaea
       61 isaqlressg evarfnrgsa asslpgffdn ggnvgdlkdg ntyllarsri iadlyqkdra
      121 qaavaaqdmg isegsfdllk rgpdeverll qiqekraais mndaqaasql rdryldlrdt
      181 fesvgvkvll almpaferlm alaqgwgdyl lenrdevvqw vdgavqaivk fvdvvdsaaq
      241 avggwqnvll vlgalkilsw vsslldlasa lgtvaaalgt lggagaatgl aalkgvgaaa
      301 lraagpiaag aallfgsedl nagekeflaa rdnpalkske vihavryfes kgytrdaavg
      361 laanlqaqsn ldpravgadg asigiglwnp rrqadfkrvy gmdmrestve qqldfvawel
      421 qntrrragvh laaattpaqa saavyrhfgl nksegpgsse erklaaaaga ihgtlffddq
      481 drgaaaaatt aaaaqasaag isssttttnn tsethihgpi timtqatdgp giasslgqag
      541 rsqnlvqqgn tgif
//
LOCUS       WP_258127035             733 aa            linear   BCT 02-MAR-2025
DEFINITION  M60 family metallopeptidase [Bacillus sp. IBL03825].
ACCESSION   WP_258127035
VERSION     WP_258127035.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. IBL03825
  ORGANISM  Bacillus sp. IBL03825
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 733)
  AUTHORS   Nakjang,S., Ndeh,D.A., Wipat,A., Bolam,D.N. and Hirt,R.P.
  TITLE     A novel extracellular metallopeptidase domain shared by animal
            host-associated mutualistic and pathogenic microbes
  JOURNAL   PLoS One 7 (1), e30287 (2012)
   PUBMED   22299034
REFERENCE   2  (residues 1 to 733)
  AUTHORS   Galloway,C.S., Wang,P., Winstanley,D. and Jones,I.M.
  TITLE     Comparison of the bacterial Enhancin-like proteins from Yersinia
            and Bacillus spp. with a baculovirus Enhancin
  JOURNAL   J Invertebr Pathol 90 (2), 134-137 (2005)
   PUBMED   16081094
REFERENCE   3  (residues 1 to 733)
  AUTHORS   Wang,P. and Granados,R.R.
  TITLE     An intestinal mucin is the target substrate for a baculovirus
            enhancin
  JOURNAL   Proc Natl Acad Sci U S A 94 (13), 6977-6982 (1997)
   PUBMED   9192677
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13402.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..733
                     /organism="Bacillus sp. IBL03825"
                     /db_xref="taxon:2953580"
     Protein         1..733
                     /product="M60 family metallopeptidase"
                     /calculated_mol_wt=82197
     Region          65..149
                     /region_name="M60-like_N"
                     /note="N-terminal domain of M60-like peptidases;
                     pfam17291"
                     /db_xref="CDD:435844"
     Region          151..420
                     /region_name="Peptidase_M60"
                     /note="Peptidase M60, enhancin and enhancin-like;
                     pfam13402"
                     /db_xref="CDD:433178"
     Region          464..586
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
     Region          606..728
                     /region_name="F5_F8_type_C"
                     /note="F5/8 type C domain; pfam00754"
                     /db_xref="CDD:459925"
ORIGIN      
        1 mnkrkngrlq kpikvlatsa ilttmlftpi mtsnldvhae taqnatqfeq refdlpgtgs
       61 fwdeakrekr deqknymptg iyvkpneqvt itvsgtqkir aiigthqydk ewgkeidlsp
      121 gsntisspng gvlgldnfqs tgtvkvqvtq ggspipffql gkhtkedwva mmnnypnaha
      181 vqlkseravl tvtrdsanky ivnqdpvpll nkydemiraq dkiaglsetd pnplhrstrr
      241 iwafvenpne qswgmyaswd gavfttagea ikstlnvnef gwgqmheagh arqqypwtwn
      301 dlrgmgevtn nlyslaafkk iypniptrld tagdynrafa ylkqtnkeyk niddlfvklv
      361 mlwqlhlayg ddfypnlhkl yretpedqlp ktdedkiqef iyntskiakq nllpffdqwg
      421 lkatqetrqk vealnnpili apiweatdan pvkplavlsk kimkasanse estgsaskai
      481 dgkkdtfwhs swtpnqypyn ltlelgdtrt isqlaylprq dgsengrilt yniytsvdgv
      541 kydkissgtw gnnsdkknat fdpvtakyvk vevtngqngf ataaevdilt dapsvkpyvl
      601 pkntmkasan seetsgsask aidgktdtfw hsswtpnqyp ynltleldkn qtiskvdylp
      661 rqdgsengri lgyniytsvd gvkynkvssg twennsnkkt atfapvtaky mkvevtngqn
      721 gfasaaevdi wgy
//
LOCUS       WP_258127596             651 aa            linear   BCT 02-MAR-2025
DEFINITION  3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing
            protein [Achromobacter anxifer].
ACCESSION   WP_258127596
VERSION     WP_258127596.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 651)
  AUTHORS   Birktoft,J.J., Holden,H.M., Hamlin,R., Xuong,N.H. and Banaszak,L.J.
  TITLE     Structure of L-3-hydroxyacyl-coenzyme A dehydrogenase: preliminary
            chain tracing at 2.8-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 84 (23), 8262-8266 (1987)
   PUBMED   3479790
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02737.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..651
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /GO_function="GO:0070403 - NAD+ binding [Evidence IEA]"
                     /GO_process="GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=68416
     Region          4..636
                     /region_name="fadJ"
                     /note="fatty acid oxidation complex subunit alpha FadJ;
                     PRK11154"
                     /db_xref="CDD:236864"
ORIGIN      
        1 mttmdtlahw rldrdadgla wltfdragsa inalsadama elalvldald aappmglvir
       61 sgkatgfivg advnefasld tpeqaralva rgwnlfnrla avryptlali eghclgggle
      121 lalacryrlv adqpgtslal pevmlgifpg wggmlrlprl igapaaldmm ltgrgadarr
      181 aaalgladar vpprlllaaa rqtvlsrkpp rgargfgawa nrwplkaiva grarkqiaak
      241 dpqghypaap aiveiwekhg gnalqapali eriissdtar nllrvfrlqe rlkanskqag
      301 iaparhvhvv gagvmggdia awcalkgmtv tlqdqdmari apaikrasdl yarrlkdprl
      361 araasdrlip dpagggvpra divieaiseq pdakralyaa leprmkadal latntsslpl
      421 etlraglarp erlvgihffn pvakmplvev vhaeggsdaa qaracafvgq idklalpvrs
      481 apgflvnavl apymlqamrs vdeglapeav daamvafgmp mgpleladtv gldiaraage
      541 elaggaeppr claerlargd lgkksgkgfy awrdgkpvkg saagapagla qrliqplida
      601 trqrvdagiv adadladagv ifgtgfapft ggplhyqssn evrstrpaha e
//
LOCUS       WP_258127619             332 aa            linear   BCT 02-MAR-2025
DEFINITION  type II secretion system F family protein [Achromobacter anxifer].
ACCESSION   WP_258127619
VERSION     WP_258127619.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 332)
  AUTHORS   Peabody,C.R., Chung,Y.J., Yen,M.R., Vidal-Ingigliardi,D.,
            Pugsley,A.P. and Saier,M.H.
  TITLE     Type II protein secretion and its relationship to bacterial type IV
            pili and archaeal flagella
  JOURNAL   Microbiology (Reading) 149 (Pt 11), 3051-3072 (2003)
   PUBMED   14600218
REFERENCE   2  (residues 1 to 332)
  AUTHORS   Py,B., Loiseau,L. and Barras,F.
  TITLE     An inner membrane platform in the type II secretion machinery of
            Gram-negative bacteria
  JOURNAL   EMBO Rep 2 (3), 244-248 (2001)
   PUBMED   11266368
REFERENCE   3  (residues 1 to 332)
  AUTHORS   Stathopoulos,C., Hendrixson,D.R., Thanassi,D.G., Hultgren,S.J., St
            Geme,J.W. 3rd and Curtiss,R. 3rd.
  TITLE     Secretion of virulence determinants by the general secretory
            pathway in gram-negative pathogens: an evolving story
  JOURNAL   Microbes Infect 2 (9), 1061-1072 (2000)
   PUBMED   10967286
REFERENCE   4  (residues 1 to 332)
  AUTHORS   Salmond,G.P. and Reeves,P.J.
  TITLE     Membrane traffic wardens and protein secretion in gram-negative
            bacteria
  JOURNAL   Trends Biochem Sci 18 (1), 7-12 (1993)
   PUBMED   8438237
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 11449670
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..332
                     /product="type II secretion system F family protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /calculated_mol_wt=35721
     Region          146..323
                     /region_name="TadC"
                     /note="Flp pilus assembly protein TadC [Extracellular
                     structures]; COG2064"
                     /db_xref="CDD:441667"
ORIGIN      
        1 mdilhswnas tvlatalmlv aaallvlglg marrlrsqgr srqvvdqala areggaaapa
       61 alrgegrkgr laaaaraadt fgkrlsegrl adallagedr klvdmagyad pgiarsrfvv
      121 irfglaillp vvavaldlsk hvtdmpmgal vaaffgfaig ymlpkwfvqr rlarrrrlaa
      181 delpllidll rllqgvglsi dqslqvlvke fgqvlpvlsf elrlaselyv rgrtreqsla
      241 rlasgfdndd lsaicrliaq vdqhggavqe plnrfgerlr dkrrlelkek vgkttvkmtg
      301 vmivtllpal livtggagfi avlrglsrmg gm
//
LOCUS       WP_258127662             264 aa            linear   BCT 02-MAR-2025
DEFINITION  TOBE domain-containing protein [Achromobacter anxifer].
ACCESSION   WP_258127662
VERSION     WP_258127662.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 264)
  AUTHORS   Koonin,E.V., Wolf,Y.I. and Aravind,L.
  TITLE     Protein fold recognition using sequence profiles and its
            application in structural genomics
  JOURNAL   Adv Protein Chem 54, 245-275 (2000)
   PUBMED   10829230
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015424.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03459.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..264
                     /product="TOBE domain-containing protein"
                     /calculated_mol_wt=27230
     Region          22..263
                     /region_name="PRK10676"
                     /note="DNA-binding transcriptional regulator ModE;
                     Provisional"
                     /db_xref="CDD:182640"
ORIGIN      
        1 mleldgsiwf rsgaqtwggk nridllaqid atgsitaaar avgmsykgaw daidamnnla
       61 geplviraag gkggggtrlt drarsliatf rameaehrkf menltragvt asgdidlmrr
      121 fmlktsarnk llgtviqira gavndeivlr iaggltitat itrestqelg latgkeaial
      181 vkassvivga pgpglrlsar nqlpgkital rpgavnseil igleggvtla aivtnesaqd
      241 laldvgadav aifkassvil gvld
//
LOCUS       WP_258127177             297 aa            linear   BCT 02-MAR-2025
DEFINITION  ETX/MTX2 family pore-forming toxin [Bacillus sp. IBL03825].
ACCESSION   WP_258127177
VERSION     WP_258127177.1
KEYWORDS    RefSeq.
SOURCE      Bacillus sp. IBL03825
  ORGANISM  Bacillus sp. IBL03825
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 297)
  AUTHORS   Petit,L., Maier,E., Gibert,M., Popoff,M.R. and Benz,R.
  TITLE     Clostridium perfringens epsilon toxin induces a rapid change of
            cell membrane permeability to ions and forms channels in artificial
            lipid bilayers
  JOURNAL   J Biol Chem 276 (19), 15736-15740 (2001)
   PUBMED   11278669
REFERENCE   2  (residues 1 to 297)
  AUTHORS   Thanabalu,T. and Porter,A.G.
  TITLE     A Bacillus sphaericus gene encoding a novel type of mosquitocidal
            toxin of 31.8 kDa
  JOURNAL   Gene 170 (1), 85-89 (1996)
   PUBMED   8621095
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015288.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03318.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Bacillus sp. IBL03825"
                     /db_xref="taxon:2953580"
     Protein         1..297
                     /product="ETX/MTX2 family pore-forming toxin"
                     /calculated_mol_wt=32437
     Region          34..261
                     /region_name="PFM_Cry51Aa-like"
                     /note="pore-forming module of Bacillus thuringiensis
                     insecticidal Cry51A toxin, Bacillus thuringiensis
                     cytotoxic parasporin-5 and similar aerolysin-type
                     beta-barrel pore-forming proteins; cd20226"
                     /db_xref="CDD:380796"
     Region          79..143
                     /region_name="putative membrane-spanning region"
                     /note="putative membrane-spanning region [structural
                     motif]"
                     /db_xref="CDD:380796"
     Region          164..250
                     /region_name="putative variable loop region"
                     /note="putative variable loop region [structural motif]"
                     /db_xref="CDD:380796"
ORIGIN      
        1 mamidfsdsi ksywdyygqi ngfgsfvdfy iydysvgnln aeqtvssgev epqiiltsvq
       61 vlenntevnq sqtlkysekt idtatstttn gikfivavkd tiqvdfsahf sfagkdysaq
      121 igaaleynfs tstantqtte klwsltqpvi vppystvvat lqiyngtasi pinlsgtvyg
      181 ngsyngntny laqesgyksn gskdywigpa selannswpd kpenyvssnd sdeslnytgs
      241 tradltmglf sqikfeqrpl pghngetktf ysplilannk rlipsaalgn dvpiink
//
LOCUS       WP_258127735             170 aa            linear   BCT 02-MAR-2025
DEFINITION  winged helix DNA-binding protein [Achromobacter anxifer].
ACCESSION   WP_258127735
VERSION     WP_258127735.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024854.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13463.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..170
                     /product="winged helix DNA-binding protein"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=18250
     Region          2..170
                     /region_name="COG5631"
                     /note="Predicted transcription regulator, contains HTH
                     domain, MarR family [Transcription]"
                     /db_xref="CDD:444358"
ORIGIN      
        1 mpvsardaiv ssshlassap elsevefgli iashafnrwm vrcmacaglp eltsldilvl
       61 nhvfhrgrgk kladvcftln vedthlvnys lkklerlgvv qsaktgkevi ytatdagaaa
      121 iqryaevreq clvkpfiesp aaddashqla ntlralsgly dqaaraatsl
//
LOCUS       WP_258127751             195 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Achromobacter anxifer].
ACCESSION   WP_258127751
VERSION     WP_258127751.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..195
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=21412
     Region          8..180
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mtskpdshle eklvaseapy ngaflkvrrd tvslpngnta treyvvhpga vvvipllddg
       61 rvllerqfry pigrvmtefp agkldpgedp lvcgkrelle etgytadqwa hagalhlaia
      121 ysteiihiyf arglragprq ldqdefldvi saqpadliqa cargevtdak tltcvlwmqn
      181 vlsgawqldw qdnag
//
LOCUS       WP_258127786             299 aa            linear   BCT 02-MAR-2025
DEFINITION  catalase [Achromobacter anxifer].
ACCESSION   WP_258127786
VERSION     WP_258127786.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012425.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00199.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..299
                     /product="catalase"
                     /EC_number="1.11.1.6"
                     /GO_function="GO:0004096 - catalase activity [Evidence
                     IEA]"
                     /GO_function="GO:0020037 - heme binding [Evidence IEA]"
                     /calculated_mol_wt=31934
     Region          10..295
                     /region_name="catalase_like"
                     /note="Catalase-like heme-binding proteins and protein
                     domains; cl09506"
                     /db_xref="CDD:471888"
     Site            order(27,64,99,104,113,283,287)
                     /site_type="other"
                     /note="heme binding pocket [chemical binding]"
                     /db_xref="CDD:163706"
ORIGIN      
        1 mqdpiaaklv dalhagadvp pgcrvnharg llvegrflgv pqasqlcaap lfddaeqpli
       61 arfsdsgpdp rirqdspqae prglavrigq hsqlvlvght legfpardpq tflafiqaln
      121 aqhtapeslq ahlaanpaaq rydqlrqdal ptgyasrsyh mlhpyrltaa dgqtrtgrlt
      181 irgrnaegah kaltgrncmd ealrhamkag pvalelaftp apeqgatddp saawpgqgsp
      241 mllgyliler iapdqdaqrt lafdpsvlpa gmafagdpll avrlqayria aerrlrgas
//
LOCUS       WP_258127800             905 aa            linear   BCT 02-MAR-2025
DEFINITION  transglycosylase SLT domain-containing protein [Escherichia coli].
ACCESSION   WP_258127800
VERSION     WP_258127800.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 905)
  AUTHORS   Koraimann,G.
  TITLE     Lytic transglycosylases in macromolecular transport systems of
            Gram-negative bacteria
  JOURNAL   Cell Mol Life Sci 60 (11), 2371-2388 (2003)
   PUBMED   14625683
REFERENCE   2  (residues 1 to 905)
  AUTHORS   Mushegian,A.R., Fullner,K.J., Koonin,E.V. and Nester,E.W.
  TITLE     A family of lysozyme-like virulence factors in bacterial pathogens
            of plants and animals
  JOURNAL   Proc Natl Acad Sci U S A 93 (14), 7321-7326 (1996)
   PUBMED   8692991
REFERENCE   3  (residues 1 to 905)
  AUTHORS   Thunnissen,A.M., Rozeboom,H.J., Kalk,K.H. and Dijkstra,B.W.
  TITLE     Structure of the 70-kDa soluble lytic transglycosylase complexed
            with bulgecin A. Implications for the enzymatic mechanism
  JOURNAL   Biochemistry 34 (39), 12729-12737 (1995)
   PUBMED   7548026
REFERENCE   4  (residues 1 to 905)
  AUTHORS   Koonin,E.V. and Rudd,K.E.
  TITLE     A conserved domain in putative bacterial and bacteriophage
            transglycosylases
  JOURNAL   Trends Biochem Sci 19 (3), 106-107 (1994)
   PUBMED   8203016
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013618.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01464.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..905
                     /product="transglycosylase SLT domain-containing protein"
                     /calculated_mol_wt=102254
     Region          15..>364
                     /region_name="PHA00658"
                     /note="putative lysin"
                     /db_xref="CDD:106967"
     Region          236..365
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
ORIGIN      
        1 mpvvpttsgr qvqsrgvqtg gfqifdvpqa gqvlanvadq yavaygearq kanvalsqda
       61 ilqlnqrsne rlynpqtgfy aqqgknaigk gqeyisgfdq dveeiaaslt deaarnmflq
      121 qartqkiqfs tgvlrheigq tnayedeqyq atrklwiqne adawndpqta tlarnsrmva
      181 iarygaargw sqerileeie sddrsatemr aknyaaanpe gwlnglfqkn dsggmdmrai
      241 rlvesgdrhf npdgsllegp itssgeraqg kyqlmpgtgk elaakrgvey nptdeqqhem
      301 lasdyvnqly gkygseiltg aaynwgmgnv dkliakvgdp rkgeiseeef irnlpsetqg
      361 wlsryrknkt amdpltiyqi dnlansqiek qrklileqle painntmaql yngevpdyip
      421 aqetiirgyg knadkiinql diaidnarif qaiqylppsq qqeemqkvkp evndphyalk
      481 ldaygklsal lqrsneaiqa qrdsrrfnea ltigekldps nksmqkaady temaqnfrin
      541 dasthdgvvr lvaqtgimps qvitqlsavs rssnqevvkn aaelfsrlye tdnasignmp
      601 kdmqgfyltv kqltdsgmsa daaieqaqnl tynqtdalka qlastqsske ykndrskamn
      661 savsnmaqwf rwdpsaddqt peaarfrndy qtlydinyrv aggnadvakq mtnqqiartw
      721 sisevngeaq fmkyapealy qygpsgwqaa qwkaekerlm ygerkeiitt sptllgitsg
      781 napvvetktp esringelfi tpdvltprng dyaimvrtkd engidrvqpf ynkhgrpmrw
      841 epsledwepy kkmqqereqy eqeeimrgqa irnfkdkhra ldeqyqrlhn ermdkfkdyf
      901 swgsk
//
LOCUS       WP_258127832             764 aa            linear   BCT 02-MAR-2025
DEFINITION  UvrD-helicase domain-containing protein [Achromobacter anxifer].
ACCESSION   WP_258127832
VERSION     WP_258127832.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 764)
  AUTHORS   Korolev,S., Hsieh,J., Gauss,G.H., Lohman,T.M. and Waksman,G.
  TITLE     Major domain swiveling revealed by the crystal structures of
            complexes of E. coli Rep helicase bound to single-stranded DNA and
            ADP
  JOURNAL   Cell 90 (4), 635-647 (1997)
   PUBMED   9288744
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012789.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00580.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..764
                     /product="UvrD-helicase domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=84158
     Region          3..762
                     /region_name="uvrD"
                     /note="DNA-dependent helicase II; Provisional; PRK11773"
                     /db_xref="CDD:236976"
ORIGIN      
        1 mmleklnpeq raavtlepqh alvlagagsg ktrvlttrma wliqtgqasp fgllavtftn
       61 kaaremlarm sailpidtrg lwigtfhglc nrmlrahhrd aglpqsfqil dvtdqlaaik
      121 rlmkangvdd ekypprdvqr fingakeegl rpadveayda hrrrlieiyq lyeaqclreg
      181 vvdfaelllr ayellsrnap vrehyqrrfr hilvdefqdt ntlqykwlrl lagggaaifa
      241 vgdddqsiya frganvgnma dferdyargt virleqnyrs fghildsana lighntgrlg
      301 knlwteqgdg epvrvieqps dgmeaqwivd eirsliregs lrreiavlyr snaqsrvleh
      361 aifsagipyk vygglrffer qeikhalayl rlmanphddt swmrvvnfpt rgigartleq
      421 lgdaarahdt slyaavalvp gkggsnlaqf aqlihrliee trdlplpemv ehmleasgln
      481 ahykaerega erlenlneli taaavfasee nydgmpagvv peqdtastln agvvdapvva
      541 sdgltplaaf lshaaleagd nqaqqgqdav qlmtvhaakg lefdavfitg leeglfphen
      601 svleasglee errlmyvait rarqrlyisl aqsrmlhgqt ryamrsrfld eipeqhlkwl
      661 spkaglaqvg stgagwgggn rgdafgrkpt ntiaprqars vttgvtvgdk qyrigqgvhh
      721 arfgegtiig lsgagqdaqa eiqfrdvgak tlalgiakld ivqg
//
LOCUS       WP_258127846             396 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Achromobacter anxifer].
ACCESSION   WP_258127846
VERSION     WP_258127846.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..396
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=40521
     Region          70..384
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(118..119,121..123,126,146,149..150,153,221,224..225,
                     228..230,233,255,259,312..313,317,321,337,340..341,
                     344..345,348)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340863"
ORIGIN      
        1 msnpyrelfq apgalgfvla gaiarlplpm igigiitmls evrgayalag avaatfalat
       61 allaprisrl vdrhgqgrvl pvaaglcvag llglaacvhw dapdwtlfvf aaltgalpsm
      121 pamirarwte ifrdrpqlrt ayalesvade lsfivgppls vglsvlffpq aaplaaalll
      181 avgvtafvvq ratepvlrft qegpqesvlr mppmrallav maamgiivgt idvlsvafar
      241 qqgmpagasl vlsayalgsc vaglvfgvlk frtplarllv vaaavtaftt iplllvndll
      301 tlslgvllag lsfaptmiia malvessvpg hrltegltwl vtglgagvaa gaalagwvvd
      361 hygvgagfwt avgagvvvll aalpvargpg sgrvda
//
LOCUS       WP_258128088             535 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Achromobacter anxifer].
ACCESSION   WP_258128088
VERSION     WP_258128088.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024700.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13304.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..535
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=58527
     Region          25..237
                     /region_name="COG3950"
                     /note="Predicted ATP-binding protein involved in virulence
                     [General function prediction only]"
                     /db_xref="CDD:443150"
ORIGIN      
        1 mtfetmipia agssltvqld vgqalflvga ngtgksslmh qfysahnars rkisahrqtw
       61 fssnaitlsp eqkrqaesyi rgsdtspqar wkddyssqra siaiydlida enmrarsiag
      121 avdggqmdla kelsrkdapl kvinellrls nipieisvhr neqvlasrhg gttysvaels
      181 dgernallia anvltvpagt lllideperh lhrsiispll tlliskrpdc afvvsthdvm
      241 lpldnpsakt llvrgctyag qsviswdvdl lesaedvdes lkrdilgarr qvlfvegnaq
      301 sldaplyalv fpnasivpks scrdvihavt gvrgsaslhw vrafglidnd rrpqsevdkl
      361 reqgvyalsv favesiyyhp diqvlvaarh aavtgsdtas lmeeacnrgi avllpharrl
      421 servvehtlr delerhlpts qdiatgnpis vtidvqaavn aelatlndll erkelhsvia
      481 rypvretpal seiakrlgfq grdqyesavr klliddtsal tqvrsmfgsl tgdli
//
LOCUS       WP_258128141             522 aa            linear   BCT 02-MAR-2025
DEFINITION  M48 family metalloprotease [Achromobacter anxifer].
ACCESSION   WP_258128141
VERSION     WP_258128141.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 522)
  AUTHORS   Quigley,A., Dong,Y.Y., Pike,A.C., Dong,L., Shrestha,L.,
            Berridge,G., Stansfeld,P.J., Sansom,M.S., Edwards,A.M., Bountra,C.,
            von Delft,F., Bullock,A.N., Burgess-Brown,N.A. and Carpenter,E.P.
  TITLE     The structural basis of ZMPSTE24-dependent laminopathies
  JOURNAL   Science 339 (6127), 1604-1607 (2013)
   PUBMED   23539603
REFERENCE   2  (residues 1 to 522)
  AUTHORS   Pryor,E.E. Jr., Horanyi,P.S., Clark,K.M., Fedoriw,N.,
            Connelly,S.M., Koszelak-Rosenblum,M., Zhu,G., Malkowski,M.G.,
            Wiener,M.C. and Dumont,M.E.
  TITLE     Structure of the integral membrane protein CAAX protease Ste24p
  JOURNAL   Science 339 (6127), 1600-1604 (2013)
   PUBMED   23539602
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013594.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01435.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..522
                     /product="M48 family metalloprotease"
                     /EC_number="3.4.24.-"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=55627
     Region          72..243
                     /region_name="Peptidase_M48_M56"
                     /note="Peptidases M48 (Ste24 endopeptidase or htpX
                     homolog) and M56 (in MecR1 and BlaR1), integral membrane
                     metallopeptidases; cl28898"
                     /db_xref="CDD:333718"
     Site            order(133..134,137,201,205)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:320682"
     Site            order(133,137,201)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:320682"
ORIGIN      
        1 mrsahilrla aisgalflta cstlpggkgf svtagqlppp padrqwpdas qdarnqraqg
       61 mglvvmpeme aylngllari ktaagvpgwp gavhvtsssa leaystgagn iylsmgwlss
      121 aesedeivai lshefghvyl dyhqmesvna agdqvatlaa vgvalarkag satgwspvds
      181 viasytlgkn vlvpawgrqq eenadrfgat islelgysyt qgfkaflerq atwesenakt
      241 qaeerqrmle qikqaaadnt rkqeaakgnn iapltelqas lnsgvagase glrtglddlw
      301 kkitvshpdt garlaslteq vmplmagkpr ppaaaapwnk araqrrtaal lknyktagea
      361 qqalqaqdyp rarklaaqaa sgpsathalp lltlsmaqae agargstlld rnlasendra
      421 wqvyvlrann llgagqsapa skvmdqgfgy frnsalawpe airfygqtqg wdqarklaqe
      481 casrfasyaa ecskaaqspa eqaeaqrrse qkaqslvdkl fk
//
LOCUS       WP_258128267             307 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Achromobacter
            anxifer].
ACCESSION   WP_258128267
VERSION     WP_258128267.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 307)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..307
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=33727
     Region          1..290
                     /region_name="PRK11139"
                     /note="DNA-binding transcriptional activator GcvA;
                     Provisional"
                     /db_xref="CDD:182990"
ORIGIN      
        1 mrrvpnfvll rafeaaarlq sfalaaqelh ltpsaishqv keleqyfgrt lflrrhrrve
       61 ptpeatrlle slsrvfdvve aacaevalap qaqvlalhca psfaakwlgp rlsdftqahp
      121 ritirlttga epldltrvne idvavsygsa leragmrtia lgrepilplc apelarsslp
      181 prelisrltl idsqlsrvtw rdwfganglr lpdtprpsfd raamaiaaav dgmgvvlesa
      241 rlaareigrg elvelgrgef pevqrethfl syrasearqe kvgafiswll riagmappaa
      301 esgradk
//
LOCUS       WP_258128271             270 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein [Achromobacter
            anxifer].
ACCESSION   WP_258128271
VERSION     WP_258128271.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 270)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 270)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 270)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 270)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..270
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=29147
     Region          22..>259
                     /region_name="AppF"
                     /note="ABC-type oligopeptide transport system, ATPase
                     component [Amino acid transport and metabolism]; COG4608"
                     /db_xref="CDD:443658"
ORIGIN      
        1 mssrstpsas islnalcfqy graglfsrrp aprilhdidl yvpagqtigl vgesgsgkst
       61 iaklmlglla ptqgqalldg kplaampara rarriqmvfq dpysslnprr tineiltapl
      121 rvhrigdaas qaasvrrmmd avglvpafaa ryprelsggq rqrvaiaral mlepqllicd
      181 eptsaldvsv qaqilnllme lqrerglgyl fishnlavvq hiadeivvlq ggrvvergpa
      241 sqvyfepvhp ytrqligatl avpqmqelaa
//
LOCUS       WP_258128277             568 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme [Achromobacter anxifer].
ACCESSION   WP_258128277
VERSION     WP_258128277.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 568)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..568
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /calculated_mol_wt=59691
     Region          1..546
                     /region_name="PRK08155"
                     /note="acetolactate synthase large subunit; cl39075"
                     /db_xref="CDD:453955"
ORIGIN      
        1 mtpvsaptts ahallrifag ngldrvflvp gesylgvlda lhdfldidvv tcrheggaaf
       61 magadgrltg rpgvamvsrg pgaanaaigv haaqqdgvpm illigqvpck dlrkeafqei
      121 dyqkmfgsia kwvhevatpq dlawaafkal rvatsgtpgp vvlvvpedvq qacvpqpdwv
      181 avpaspaqpa patlerlqal laaarkplii aggafnapgg realrqlaer hgipvavsfr
      241 qhdlfpnthp lyagdldlat qpaqvaafds sdlilalgtr lgdittqgyt fpayprpsqt
      301 lvhchadahf vnqhfaadvg viadpvataq alaalppagr agredwaasl raireraadw
      361 pdpkaddgvp fvsvvralae qapadlmvcl dagtfaapvy rhfpfaypqr lmasqsgamg
      421 ygtpaaiaaq lrhpqskvvc lvgdggfmmt gnemmaaaer glpvffivsn nncygsirlh
      481 qartypgrha gtnlaspdft mmarafgmqt ehvtrpdqva aavarglast apyflevkts
      541 laailpegvd saagvdllgr gqpaphsr
//
LOCUS       WP_258128337             407 aa            linear   BCT 02-MAR-2025
DEFINITION  FAD-dependent monooxygenase [Achromobacter anxifer].
ACCESSION   WP_258128337
VERSION     WP_258128337.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 407)
  AUTHORS   Schreuder,H.A., van der Laan,J.M., Swarte,M.B., Kalk,K.H., Hol,W.G.
            and Drenth,J.
  TITLE     Crystal structure of the reduced form of p-hydroxybenzoate
            hydroxylase refined at 2.3 A resolution
  JOURNAL   Proteins 14 (2), 178-190 (1992)
   PUBMED   1409567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013646.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01494.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..407
                     /product="FAD-dependent monooxygenase"
                     /GO_function="GO:0071949 - FAD binding [Evidence IEA]"
                     /calculated_mol_wt=43268
     Region          15..344
                     /region_name="PRK06753"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:168661"
ORIGIN      
        1 meigilgggi aglsvalalr klghrprvye rgaaattmga gvtlwpnagf vlkemgllqn
       61 vaavggrpaa mrrqdaagnp lggldiglld rtmgypthti lrrdllavll dhaaragiev
      121 vyghravave ldadgravar fenglcirpd lligadgrmd svarrfvagd napvyqgfvn
      181 wigvaqadda lvddiaiqdy wgagerfglv pvqpglvywa aaqarplaga epaadprrev
      241 erlfggwpdp variiqatpa halrlievhd leplrtwsra nvllvgdaah aplptsgqga
      301 cqaledawhl arcledadgc ledalprfte lrvpktsqli eqarffargl fatdpeacri
      361 rnqrakdadp lrdvqamaag waqglpmsgq aeadsagqag fgslyra
//
LOCUS       WP_258128396             264 aa            linear   BCT 02-MAR-2025
DEFINITION  bifunctional DNA primase/polymerase, partial [Lacticaseibacillus
            rhamnosus].
ACCESSION   WP_258128396
VERSION     WP_258128396.1
KEYWORDS    RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (residues 1 to 264)
  AUTHORS   Lipps,G., Weinzierl,A.O., von Scheven,G., Buchen,C. and Cramer,P.
  TITLE     Structure of a bifunctional DNA primase-polymerase
  JOURNAL   Nat Struct Mol Biol 11 (2), 157-162 (2004)
   PUBMED   14730355
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020811.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09250.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Lacticaseibacillus rhamnosus"
                     /db_xref="taxon:47715"
     Protein         1..>264
                     /product="bifunctional DNA primase/polymerase"
     Region          8..172
                     /region_name="Prim-Pol"
                     /note="Bifunctional DNA primase/polymerase, N-terminal;
                     pfam09250"
                     /db_xref="CDD:430484"
     Site            order(26,68,70,109,137)
                     /site_type="active"
                     /note="polymerase nucleotide-binding site [active]"
                     /db_xref="CDD:240129"
     Site            order(58,68,70,103,106..107,109,137)
                     /site_type="other"
                     /note="nucleotide binding site [chemical binding]"
                     /db_xref="CDD:240129"
     Site            order(68,70,109,137)
                     /site_type="other"
                     /note="primase nucleotide-binding site [nucleotide
                     binding]"
                     /db_xref="CDD:240129"
     Region          206..264
                     /region_name="PriCT_1"
                     /note="Primase C terminal 1 (PriCT-1); smart00942"
                     /db_xref="CDD:214926"
ORIGIN      
        1 mvdvlkvalg yqqhgfavyp lapgtrtplk gshgykdatk dpeqakkwwg ehpnyniglg
       61 ldgvlvfdid vghksgtngs dtlaklcadg ragqipssya eispngglhi fftypkelkl
      121 tsrsdlfskn gektgldyva tgvpvfpsir engiyqplrg rkitklapvp qwlldeiqrv
      181 shpnqvfsgs tvyrgkrwtg klldeivnga stgnrndflt kiagkmlftg aepqtvynll
      241 fttndnyldt plaeaevnki fksv
//
LOCUS       WP_258128416             456 aa            linear   BCT 02-MAR-2025
DEFINITION  flagellar filament capping protein FliD [Achromobacter anxifer].
ACCESSION   WP_258128416
VERSION     WP_258128416.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 456)
  AUTHORS   Tasteyre,A., Karjalainen,T., Avesani,V., Delmee,M., Collignon,A.,
            Bourlioux,P. and Barc,M.C.
  TITLE     Molecular characterization of fliD gene encoding flagellar cap and
            its expression among Clostridium difficile isolates from different
            serogroups
  JOURNAL   J Clin Microbiol 39 (3), 1178-1183 (2001)
   PUBMED   11230454
REFERENCE   2  (residues 1 to 456)
  AUTHORS   Arora,S.K., Ritchings,B.W., Almira,E.C., Lory,S. and Ramphal,R.
  TITLE     The Pseudomonas aeruginosa flagellar cap protein, FliD, is
            responsible for mucin adhesion
  JOURNAL   Infect Immun 66 (3), 1000-1007 (1998)
   PUBMED   9488388
REFERENCE   3  (residues 1 to 456)
  AUTHORS   Chen,L. and Helmann,J.D.
  TITLE     The Bacillus subtilis sigma D-dependent operon encoding the
            flagellar proteins FliD, FliS, and FliT
  JOURNAL   J Bacteriol 176 (11), 3093-3101 (1994)
   PUBMED   8195064
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07195.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     gene            1..456
                     /gene="fliD"
     Protein         1..456
                     /product="flagellar filament capping protein FliD"
                     /GO_component="GO:0009288 - bacterial-type flagellum
                     [Evidence IEA]"
                     /GO_process="GO:0007155 - cell adhesion [Evidence IEA]"
                     /calculated_mol_wt=47073
     Region          1..452
                     /region_name="FliD"
                     /note="Flagellar capping protein FliD [Cell motility];
                     COG1345"
                     /db_xref="CDD:440956"
ORIGIN      
        1 masitnlgst tglplekilt dlqaaedkkl tlytnrqasy earvsafgqi qsavealqka
       61 aaalgkastl davkptvvgd gvtatigedg atmgeysinv knlataqtlq sglvadrkas
      121 ngasgsfeie ltngekhtid lsdtslngia kainsddkag lratiitnds gsylmlsakd
      181 tgvqasvkti tvtgtpelen ilsynsgsgt qltqqtaatd aeleingitv ksgsnsisga
      241 idgvtlnlta ktdpnkvvtl klqgdtsvas kavqdfvsay navqstiskl tafditaqtn
      301 qaltgdsttr giqsamssal qvftgegsvr sladlgiamd pktgllkldq kqldsaltan
      361 padvkrlmts adglaarfda atkaalgsng siklsqdgln esikdvkdql erakatstas
      421 maamraqfva ldkfvsqqtv tanyltqqfa amtksk
//
LOCUS       WP_258128432             567 aa            linear   BCT 02-MAR-2025
DEFINITION  methyl-accepting chemotaxis protein [Achromobacter anxifer].
ACCESSION   WP_258128432
VERSION     WP_258128432.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 567)
  AUTHORS   Hanlon,D.W., Marquez-Magana,L.M., Carpenter,P.B., Chamberlin,M.J.
            and Ordal,G.W.
  TITLE     Sequence and characterization of Bacillus subtilis CheW
  JOURNAL   J Biol Chem 267 (17), 12055-12060 (1992)
   PUBMED   1601874
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012245.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00015.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..567
                     /product="methyl-accepting chemotaxis protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=60113
     Region          96..567
                     /region_name="MCP_signal"
                     /note="Methyl-accepting chemotaxis protein (MCP),
                     signaling domain; cl46910"
                     /db_xref="CDD:481250"
     Site            order(319..320,323..324,327,330..331,333..334,337,
                     340..341,344,347..348,351..352,355,358..359,361..362,366,
                     368..369,372,375..376,379..380,383,386,389..390,393,397,
                     400,407,411,414,417..418,421,424..425,428..429,431..432,
                     435..436,449..450,453,456..457,460,463..464,466..467,
                     470..471,474,477..478,481,484..485,487..488,491..492,
                     494..495,498,501..502)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206779"
     Site            389..422
                     /site_type="other"
                     /note="putative CheW interface [polypeptide binding]"
                     /db_xref="CDD:206779"
ORIGIN      
        1 mrkffanmti rssllwvlaf fsfmlvigaa lgvlslrisn gtlaeikqsq elddavgrvv
       61 ssykdtmtgl graasanyad ivknvgqatl ltqglssdaa gllerakasm nkgqaeyeyy
      121 ktlsrpaeaa etlkeidesy galvqqgltp lvaslekadm pafqkqvqtv qdalegrfar
      181 aiegfdfwra sktldaheva qvryqfvlma vgaggviaal lvfatyvflr rrvlqplkea
      241 ghhfdriagg dltarvdvrn tneigqlfaa lkrmqesltr tvasvrrgvd einvgsheia
      301 agntdlssrt eqqaasleet aasmeqlast vkqnadnarq anqlaasasd vaerggsavs
      361 evvstmqeis assrkiseiv svidgiafqt nilalnaave aarageqgkg favvagevrs
      421 laqrsaqaak eikgliedsv tkvgagsqqv eragstmqei vasvkrvtdi mgeisaasee
      481 qssgieqvnr avsqmdevtq qnaalveeaa aaagslqeqa qrlaeavavf kvnageviev
      541 paqrlssars sdddarlqap dalalgh
//
LOCUS       WP_258128559             463 aa            linear   BCT 02-MAR-2025
DEFINITION  GA-like domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_258128559
VERSION     WP_258128559.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 463)
  AUTHORS   Whelan,F., Lafita,A., Gilburt,J., Degut,C., Griffiths,S.C.,
            Jenkins,H.T., St John,A.N., Paci,E., Moir,J.W.B., Plevin,M.J.,
            Baumann,C.G., Bateman,A. and Potts,J.R.
  TITLE     Periscope Proteins are variable-length regulators of bacterial cell
            surface interactions
  JOURNAL   Proc Natl Acad Sci U S A 118 (23) (2021)
   PUBMED   34074781
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF047257.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22775.2
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..463
                     /product="GA-like domain-containing protein"
     Region          <49..294
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
ORIGIN      
        1 aldgiqvpev ndqdgngkad aeeaaaavaa atekveaaea adkaakdkla elnadklitp
       61 eekaqletak qnadtlkgea dsavkalpdt aaekgglqgr vdaldgiqvp evndqdgngk
      121 adaeeaavaf yeralpsnvs gdlypqpsif gdkvssvskn wstlldsnpg syvtsqrlds
      181 ganqynyngh tgsdvisitd slggldrtqa srfpvglftg egndlivtgr dygrntsagy
      241 tdhshrtdmg ngddtlvvgv gnndvtlyvn eegqlrattd syngstsidy tglnssssgg
      301 tisgtdivmg agndtvlalg yegnsadaii ntnidlgagn dfiyangeis tnngtqvnii
      361 ggegfdtisl dnttvtsamf sgfehvdlhs tshlilnsdd fksqdiegei lkisgssgas
      421 vdvqnfdwen lssandgdvk yftyqstdip gltlwiqegi evk
//
LOCUS       WP_258128580             413 aa            linear   BCT 02-MAR-2025
DEFINITION  styrene monooxygenase/indole monooxygenase family protein
            [Achromobacter anxifer].
ACCESSION   WP_258128580
VERSION     WP_258128580.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 413)
  AUTHORS   Ukaegbu,U.E., Kantz,A., Beaton,M., Gassner,G.T. and Rosenzweig,A.C.
  TITLE     Structure and ligand binding properties of the epoxidase component
            of styrene monooxygenase
  JOURNAL   Biochemistry 49 (8), 1678-1688 (2010)
   PUBMED   20055497
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037663.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17885.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..413
                     /product="styrene monooxygenase/indole monooxygenase
                     family protein"
                     /calculated_mol_wt=44755
     Region          22..343
                     /region_name="FixC"
                     /note="Dehydrogenase (flavoprotein) [Energy production and
                     conversion]; COG0644"
                     /db_xref="CDD:440409"
     Region          148..255
                     /region_name="Smoa_sbd"
                     /note="Styrene monooxygenase A putative substrate binding
                     domain; pfam17885"
                     /db_xref="CDD:436116"
ORIGIN      
        1 mrriaivggg qaglplalgl ldkgyevtvv tnrepddirr gkvmssqcmf daslqiernl
       61 glnqweaecp tvdgiglaip hperpghkli dwvarldrsa qavdqrikmp awmelfaarg
      121 grlliqdggv aelellaash dlvllaagkg evvklferda lrsrfdrpqr alaltyvhgm
      181 rpapdysrva fnlipgmgey fvfpaltvsg pceimvfegv pggpmdcwrd irspqehlaq
      241 slhilhtylp weaercsave ltdangilag sfaptvrkpv ltlpsgrlvf glgdavvtnd
      301 pitgqgsnna tkacavylda ilahgdgayt adwmqrtfer fwdyggavve wtnsmllppa
      361 phllkllqaa dhtpalasii angfnhppsl fpwwgdatac eafiaaqpar aaa
//
LOCUS       WP_258128590             238 aa            linear   BCT 02-MAR-2025
DEFINITION  conjugal transfer protein TraH, partial [Escherichia coli].
ACCESSION   WP_258128590
VERSION     WP_258128590.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 238)
  AUTHORS   Lawley,T.D., Gilmour,M.W., Gunton,J.E., Standeven,L.J. and
            Taylor,D.E.
  TITLE     Functional and mutational analysis of conjugative transfer region 1
            (Tra1) from the IncHI1 plasmid R27
  JOURNAL   J Bacteriol 184 (8), 2173-2180 (2002)
   PUBMED   11914349
REFERENCE   2  (residues 1 to 238)
  AUTHORS   Maneewannakul,S., Maneewannakul,K. and Ippen-Ihler,K.
  TITLE     Characterization, localization, and sequence of F transfer region
            products: the pilus assembly gene product TraW and a new product,
            TrbI
  JOURNAL   J Bacteriol 174 (17), 5567-5574 (1992)
   PUBMED   1355084
REFERENCE   3  (residues 1 to 238)
  AUTHORS   Ham,L.M., Firth,N. and Skurray,R.
  TITLE     Nucleotide sequence of the F plasmid transfer gene, traH:
            identification of a new gene and a promoter within the transfer
            operon
  JOURNAL   Gene 75 (1), 157-165 (1989)
   PUBMED   2656408
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017892.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06122.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..238
                     /product="conjugal transfer protein TraH"
     Region          <1..235
                     /region_name="TraH"
                     /note="Conjugative relaxosome accessory transposon
                     protein; cl05580"
                     /db_xref="CDD:446722"
ORIGIN      
        1 iiwdslsknr mldgnkelke fimtltgtli fgedseitpl parttdrdiv raimeggtak
       61 iyhcndsdkc lkvvadanvt iskdralksq iaklltsiqn kalsdsplae nektfiqstt
      121 ipvfrylvdp lmlgvsnsvl yqltdyigyd imlqyiqell qqaramistg nypqavldsv
      181 ldnlnqaqqq iaifqsqvqv qqdallvvdr qmsymrqqls armlsryqnn yhfgggvq
//
LOCUS       WP_258128643             270 aa            linear   BCT 02-MAR-2025
DEFINITION  PfkB family carbohydrate kinase [Lacticaseibacillus rhamnosus].
ACCESSION   WP_258128643
VERSION     WP_258128643.1
KEYWORDS    RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (residues 1 to 270)
  AUTHORS   Sigrell,J.A., Cameron,A.D., Jones,T.A. and Mowbray,S.L.
  TITLE     Structure of Escherichia coli ribokinase in complex with ribose and
            dinucleotide determined to 1.8 A resolution: insights into a new
            family of kinase structures
  JOURNAL   Structure 6 (2), 183-193 (1998)
   PUBMED   9519409
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012515.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00294.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Lacticaseibacillus rhamnosus"
                     /db_xref="taxon:47715"
     Protein         1..270
                     /product="PfkB family carbohydrate kinase"
                     /calculated_mol_wt=28659
     Region          2..262
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
     Site            order(28,216,219)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238177"
     Site            order(160,187,214,217..218,221)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238177"
ORIGIN      
        1 mkiiaigdnv vdlypadkkm flgghaanta afatmmglda aylgtfgnda rgdfarrtli
       61 elgvdlshsl qydgpnaftt mkittgkrhq tvgepvqelq lsrddiayin tfdlvylnne
      121 sgadaflsai taptiydfst idddrifkki apqidlayls gkakshydve slcrrvaaag
      181 cqrvvcsrgl rgsaalvadm mswqqalgvk avdalgagda yitcfaatly ssqkptldak
      241 vseslshaak fasaqvqlpg sfghgaalia
//
LOCUS       WP_258128698              70 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase, partial
            [Lacticaseibacillus rhamnosus].
ACCESSION   WP_258128698
VERSION     WP_258128698.1
KEYWORDS    RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (residues 1 to 70)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 70)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Lacticaseibacillus rhamnosus"
                     /db_xref="taxon:47715"
     Protein         1..>70
                     /product="SDR family NAD(P)-dependent oxidoreductase"
     Region          1..>58
                     /region_name="PRK08220"
                     /note="2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated"
                     /db_xref="CDD:236190"
ORIGIN      
        1 mnqfdfsgqt vvvtgaasgi gaaqaaafka agaqvigvdl qpmtgvtvai qadvsdpetg
       61 kkraadytpd
//
LOCUS       WP_258128704              76 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding cassette domain-containing protein, partial
            [Lacticaseibacillus rhamnosus].
ACCESSION   WP_258128704
VERSION     WP_258128704.1
KEYWORDS    RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (residues 1 to 76)
  AUTHORS   Hung,L.W., Wang,I.X., Nikaido,K., Liu,P.Q., Ames,G.F. and Kim,S.H.
  TITLE     Crystal structure of the ATP-binding subunit of an ABC transporter
  JOURNAL   Nature 396 (6712), 703-707 (1998)
   PUBMED   9872322
REFERENCE   2  (residues 1 to 76)
  AUTHORS   Rosteck,P.R. Jr., Reynolds,P.A. and Hershberger,C.L.
  TITLE     Homology between proteins controlling Streptomyces fradiae tylosin
            resistance and ATP-binding transport
  JOURNAL   Gene 102 (1), 27-32 (1991)
   PUBMED   1864505
REFERENCE   3  (residues 1 to 76)
  AUTHORS   Higgins,C.F., Hyde,S.C., Mimmack,M.M., Gileadi,U., Gill,D.R. and
            Gallagher,M.P.
  TITLE     Binding protein-dependent transport systems
  JOURNAL   J Bioenerg Biomembr 22 (4), 571-592 (1990)
   PUBMED   2229036
REFERENCE   4  (residues 1 to 76)
  AUTHORS   Blight,M.A. and Holland,I.B.
  TITLE     Structure and function of haemolysin B,P-glycoprotein and other
            members of a novel family of membrane translocators
  JOURNAL   Mol Microbiol 4 (6), 873-880 (1990)
   PUBMED   1977073
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012235.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00005.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Lacticaseibacillus rhamnosus"
                     /db_xref="taxon:47715"
     Protein         1..>76
                     /product="ATP-binding cassette domain-containing protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
     Region          <2..>76
                     /region_name="GsiA"
                     /note="ABC-type glutathione transport system ATPase
                     component, contains duplicated ATPase domain
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1123"
                     /db_xref="CDD:440740"
ORIGIN      
        1 madsqkkkvl vsvkhlvqtf nagkkdevka iqdisfdiye getlglvges gsgktttgra
       61 iirlydptsg eilyng
//
LOCUS       WP_258128706              60 aa            linear   BCT 02-MAR-2025
DEFINITION  single-stranded DNA-binding protein, partial [Lacticaseibacillus
            rhamnosus].
ACCESSION   WP_258128706
VERSION     WP_258128706.1
KEYWORDS    RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (residues 1 to 60)
  AUTHORS   Webster,G., Genschel,J., Curth,U., Urbanke,C., Kang,C. and
            Hilgenfeld,R.
  TITLE     A common core for binding single-stranded DNA: structural
            comparison of the single-stranded DNA-binding proteins (SSB) from
            E. coli and human mitochondria
  JOURNAL   FEBS Lett 411 (2-3), 313-316 (1997)
   PUBMED   9271227
  REMARK    Erratum:[FEBS Lett 1997 Oct 27;416(3):387]
REFERENCE   2  (residues 1 to 60)
  AUTHORS   Raghunathan,S., Ricard,C.S., Lohman,T.M. and Waksman,G.
  TITLE     Crystal structure of the homo-tetrameric DNA binding domain of
            Escherichia coli single-stranded DNA-binding protein determined by
            multiwavelength x-ray diffraction on the selenomethionyl protein at
            2.9-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 94 (13), 6652-6657 (1997)
   PUBMED   9192620
REFERENCE   3  (residues 1 to 60)
  AUTHORS   Yang,C., Curth,U., Urbanke,C. and Kang,C.
  TITLE     Crystal structure of human mitochondrial single-stranded DNA
            binding protein at 2.4 A resolution
  JOURNAL   Nat Struct Biol 4 (2), 153-157 (1997)
   PUBMED   9033597
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012651.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00436.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..60
                     /organism="Lacticaseibacillus rhamnosus"
                     /db_xref="taxon:47715"
     Protein         1..>60
                     /product="single-stranded DNA-binding protein"
                     /GO_function="GO:0003697 - single-stranded DNA binding
                     [Evidence IEA]"
     Region          1..>60
                     /region_name="Replication protein A, class 2b
                     aminoacyl-tRNA synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold."
                     /note="This superfamily includes two
                     oligonucleotide/oligosaccharide binding fold (OBF) domain
                     families. One of these contains the OBF domains of the
                     large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small
                     (RPA3, 14 kDa) subunits of human heterotrimeric...;
                     cl09930"
                     /db_xref="CDD:471953"
ORIGIN      
        1 mlnsvaltgr ltkpvdlsyt qsgkavgsft iavdlqfrsa ngelendfin cdiwrksadn
//
LOCUS       WP_258128743             527 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidylprolyl isomerase [Achromobacter anxifer].
ACCESSION   WP_258128743
VERSION     WP_258128743.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012846.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00639.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..527
                     /product="peptidylprolyl isomerase"
                     /EC_number="5.2.1.8"
                     /GO_function="GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /calculated_mol_wt=57531
     Region          51..512
                     /region_name="PRK10770"
                     /note="peptidyl-prolyl cis-trans isomerase SurA;
                     Provisional"
                     /db_xref="CDD:236758"
ORIGIN      
        1 mmrrlhslrr lsgnalllav caglpvahaa eqggkgantg akantpaqks aapapqreqf
       61 vdgiaaivdk dvitlrelre atqritgelk srgiqvpddq tlqhqvlqrl imervqrhea
      121 drmgirvdda qvdqaiqtia srnkitvaql rqeieksgth wdayrkslre eirtdrlrqr
      181 avdstivisd aevdaflkdq rrnpafgaap qaapqpqaqp epapeqaaap sgpmlyalaq
      241 ilvrvpegas pdqlaalrkk aegllaqakr gddfaslaaa asdgpealqg gvmgvrpldg
      301 wpdlfvqavs nlqkgqvsgl iqsgngfhii kvmdrgtaqp apartarapa paqapqpaaa
      361 apaqshqgpv evmqtrarhi liktstvmsd eqarqrleqv rqrllsggak fedmarqysq
      421 datapqggel gwlnpgetvp pfeaamnalk pgeisppiqs pfgwhlieve errqhdatdd
      481 larmkarqil ferraqpafe dwleqlraqa yidnrlekqq kiqqnnr
//
LOCUS       WP_258128745             409 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleoside recognition domain-containing protein [Achromobacter
            anxifer].
ACCESSION   WP_258128745
VERSION     WP_258128745.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 409)
  AUTHORS   Hantke,K.
  TITLE     Is the bacterial ferrous iron transporter FeoB a living fossil?
  JOURNAL   Trends Microbiol 11 (5), 192-195 (2003)
   PUBMED   12781516
REFERENCE   2  (residues 1 to 409)
  AUTHORS   Loewen,S.K., Ng,A.M., Yao,S.Y., Cass,C.E., Baldwin,S.A. and
            Young,J.D.
  TITLE     Identification of amino acid residues responsible for the
            pyrimidine and purine nucleoside specificities of human
            concentrative Na(+) nucleoside cotransporters hCNT1 and hCNT2
  JOURNAL   J Biol Chem 274 (35), 24475-24484 (1999)
   PUBMED   10455109
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019292.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07670.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..409
                     /product="nucleoside recognition domain-containing
                     protein"
                     /calculated_mol_wt=43291
     Region          1..202
                     /region_name="SpmA"
                     /note="Spore maturation protein SpmA (function unknown)
                     [General function prediction only]; COG2715"
                     /db_xref="CDD:442028"
     Region          238..409
                     /region_name="SpmB"
                     /note="Spore maturation protein SpmB (function unknown)
                     [Function unknown]; COG0700"
                     /db_xref="CDD:440464"
ORIGIN      
        1 mlnklwlgff ltaaaaalyr wlfigdaevf rlmvaslfdm arvsvevmvl lfgtltlwlg
       61 flriaegagl veklarvlgp lfarlmpevp rnhpaiglit lnfaanglgl dnaatpiglr
      121 amrelqslnp tpetasnaqi lflvlnassl tllpvtlfmf raqqgaadpt lvflpillat
      181 sastlagfla vaasqrlrli dpvvmlwlgg aallmggfma llasmsaaai aslssllgnl
      241 tlfgillafl iagawkkvpv yeafiegake gfdiaksllp ylvamlcavg vlrasgaldf
      301 lldgirwlav qagwdtrfvd alptalvkpf sgsaaramml etmthfgvds fpallaavvq
      361 gstettfyvl avyfgsvgil rarhavgcal iadlagvlaa igvcywffg
//
LOCUS       WP_258128753             286 aa            linear   BCT 02-MAR-2025
DEFINITION  MaoC/PaaZ C-terminal domain-containing protein [Achromobacter
            anxifer].
ACCESSION   WP_258128753
VERSION     WP_258128753.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 286)
  AUTHORS   Fukui,T., Shiomi,N. and Doi,Y.
  TITLE     Expression and characterization of (R)-specific enoyl coenzyme A
            hydratase involved in polyhydroxyalkanoate biosynthesis by
            Aeromonas caviae
  JOURNAL   J Bacteriol 180 (3), 667-673 (1998)
   PUBMED   9457873
REFERENCE   2  (residues 1 to 286)
  AUTHORS   Steinebach,V., Benen,J.A., Bader,R., Postma,P.W., De Vries,S. and
            Duine,J.A.
  TITLE     Cloning of the maoA gene that encodes aromatic amine oxidase of
            Escherichia coli W3350 and characterization of the overexpressed
            enzyme
  JOURNAL   Eur J Biochem 237 (3), 584-591 (1996)
   PUBMED   8647101
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013722.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01575.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..286
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /calculated_mol_wt=31256
     Region          2..285
                     /region_name="PLN02864"
                     /note="enoyl-CoA hydratase"
                     /db_xref="CDD:178455"
ORIGIN      
        1 mpldyatvkn wrfddvrqry dekdtmlyal giglgqdped agqlryvyek dlqafptmsv
       61 vlgypgfwvr daragidwvr vvhgeqrltm haplpasgvv igksrnthvi dkgadkgaiv
      121 iteralhdgt garlatlqqs tfcrgdggfg qgdsgpeplp aapagepdlr celrippdaa
      181 llyrlnadrn plhadpevar qagyprpilh glcsygvvah aivksccdyn asrlaslntr
      241 fsapvypget lqcdiwrmpg gllrfqaraq ernvvvlshg taelrp
//
LOCUS       WP_258128754             304 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family NAD(P)-dependent oxidoreductase [Achromobacter anxifer].
ACCESSION   WP_258128754
VERSION     WP_258128754.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   Yamashita,A., Kato,H., Wakatsuki,S., Tomizaki,T., Nakatsu,T.,
            Nakajima,K., Hashimoto,T., Yamada,Y. and Oda,J.
  TITLE     Structure of tropinone reductase-II complexed with NADP+ and
            pseudotropine at 1.9 A resolution: implication for stereospecific
            substrate binding and catalysis
  JOURNAL   Biochemistry 38 (24), 7630-7637 (1999)
   PUBMED   10387002
REFERENCE   2  (residues 1 to 304)
  AUTHORS   Benach,J., Atrian,S., Gonzalez-Duarte,R. and Ladenstein,R.
  TITLE     The refined crystal structure of Drosophila lebanonensis alcohol
            dehydrogenase at 1.9 A resolution
  JOURNAL   J Mol Biol 282 (2), 383-399 (1998)
   PUBMED   9735295
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012334.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00106.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..304
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /calculated_mol_wt=32029
     Region          7..254
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(14,16..17,19,38..40,100..102,150..152,165,169,
                     195..198)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(124,152,165,169)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 msgmvsgkvv ivtgagggig rsialamaqa gakvvvndig vsltgeggae gpaqavvkei
       61 vaaggqavan tdsvaaydsa srcvqtaida ygridavvnn agnlrdrvfh kmseeewsqv
      121 lgvhlngsff msraaapyfr eqesgafvhm tstsglignf gqanyaaakl givalsksia
      181 ldmarynvrs nciapfawsr mtssipaetd eekarveklk kmeagkvapm avylasdaas
      241 avtaqifavr aneimlmsqp rplrtvhhge gwtperiaei avpamrkhfy alerspdvid
      301 wdpi
//
LOCUS       WP_258128820             295 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Achromobacter
            anxifer].
ACCESSION   WP_258128820
VERSION     WP_258128820.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 295)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..295
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=32010
     Region          1..>147
                     /region_name="PRK11151"
                     /note="DNA-binding transcriptional regulator OxyR;
                     Provisional"
                     /db_xref="CDD:182999"
     Region          90..283
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Site            order(105..106,108..109,112,116,118..124,213..218,
                     224..225,227..228)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:176102"
ORIGIN      
        1 mdirtlytli aiadhgsfae agntiglsls avsmqvrale delgitifdr srrppiltdt
       61 glalvhrard liahwesmsa slkkgtsagl lklgsvhtcv sgvlplalrh lqkqghglev
      121 hvttglthdl eralyhrqld vaivtepdap rsgldfmpfv eeqlvviahr svkgasdqei
      181 leqtpyvrfn rsarvghlvq eemvrrritv rstmeidnle gviamvangl gasvvparrg
      241 rnefpsgirv ipfgsptvtr rlgilapken prahlsqlll dalksvcasq qeaag
//
LOCUS       WP_258128873             255 aa            linear   BCT 02-MAR-2025
DEFINITION  extracellular solute-binding protein [Achromobacter anxifer].
ACCESSION   WP_258128873
VERSION     WP_258128873.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 255)
  AUTHORS   Vassylyev,D.G., Tomitori,H., Kashiwagi,K., Morikawa,K. and
            Igarashi,K.
  TITLE     Crystal structure and mutational analysis of the Escherichia coli
            putrescine receptor. Structural basis for substrate specificity
  JOURNAL   J Biol Chem 273 (28), 17604-17609 (1998)
   PUBMED   9651355
REFERENCE   2  (residues 1 to 255)
  AUTHORS   Bruns,C.M., Nowalk,A.J., Arvai,A.S., McTigue,M.A., Vaughan,K.G.,
            Mietzner,T.A. and McRee,D.E.
  TITLE     Structure of Haemophilus influenzae Fe(+3)-binding protein reveals
            convergent evolution within a superfamily
  JOURNAL   Nat Struct Biol 4 (11), 919-924 (1997)
   PUBMED   9360608
REFERENCE   3  (residues 1 to 255)
  AUTHORS   Tam,R. and Saier,M.H. Jr.
  TITLE     Structural, functional, and evolutionary relationships among
            extracellular solute-binding receptors of bacteria
  JOURNAL   Microbiol Rev 57 (2), 320-346 (1993)
   PUBMED   8336670
REFERENCE   4  (residues 1 to 255)
  AUTHORS   Spurlino,J.C., Lu,G.Y. and Quiocho,F.A.
  TITLE     The 2.3-A resolution structure of the maltose- or
            maltodextrin-binding protein, a primary receptor of bacterial
            active transport and chemotaxis
  JOURNAL   J Biol Chem 266 (8), 5202-5219 (1991)
   PUBMED   2002054
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013697.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01547.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..255
                     /product="extracellular solute-binding protein"
                     /calculated_mol_wt=26984
     Region          22..254
                     /region_name="AcfC"
                     /note="Accessory colonization factor AcfC, contains
                     ABC-type periplasmic domain [Cell wall/membrane/envelope
                     biogenesis]; COG4588"
                     /db_xref="CDD:443645"
ORIGIN      
        1 mksikslacg ialacvaags awaapglnvy gpggpapamk eaaeafgkaq gisvtvtagp
       61 tpawaeqakq dadviysgae nmmsgfasal pgvfdlrear tlylrpsail vrpgnpkaik
      121 gfkdllkpgi kvmavsgagq tglwedvagr lgdietvraf ranlvlpeag nsaqarkqwt
      181 edktidawli wniwqvsnpd laslveveep yriyrdagav vtkkgkanpq aqafvdflta
      241 pegraifkkw gwktd
//
LOCUS       WP_258128895             462 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta fold hydrolase [Achromobacter anxifer].
ACCESSION   WP_258128895
VERSION     WP_258128895.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024109.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12697.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..462
                     /product="alpha/beta fold hydrolase"
                     /calculated_mol_wt=47820
     Region          8..461
                     /region_name="PRK14875"
                     /note="acetoin dehydrogenase E2 subunit
                     dihydrolipoyllysine-residue acetyltransferase;
                     Provisional"
                     /db_xref="CDD:184875"
ORIGIN      
        1 mtrtldmvvp ptgealdaar lvawivtpgq afkagdvlve ietdksiiev pahddgimle
       61 hlvavdgivn adtviarvem egevppgsgt saaqtpsvaa saggasvatp lppvahatsq
      121 papqsvsqst hpthsaqpga rkfatpaarr vaaergiald avqgtgpngr vtvadvgegp
      181 qragargveg mqargaagdk regwaatrhg dvrysvwegs gpasqtavli hgmfgdrdaw
      241 aslahalnrg glrvlamdlp chgatrsqaa rfeqvvdava dtvasqcagp ltlighsfga
      301 avaaraasrp gmdvsalili apvglgteid qgfltgmtha atneavqrel qkltvtgmtp
      361 sgnfidalrq stqarrepli elcrevgwng vqqlnivpdl anlssrctli hgrrdavipw
      421 rhalnapprt alhllpdagh mpqweagklv adivldalaa ar
//
LOCUS       WP_258128913             696 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4344 domain-containing metallopeptidase [Achromobacter anxifer].
ACCESSION   WP_258128913
VERSION     WP_258128913.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025606.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14247.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..696
                     /product="DUF4344 domain-containing metallopeptidase"
                     /calculated_mol_wt=73659
     Region          <263..406
                     /region_name="DUF4344"
                     /note="Putative metallopeptidase; pfam14247"
                     /db_xref="CDD:433808"
     Region          460..>502
                     /region_name="DUF4344"
                     /note="Putative metallopeptidase; pfam14247"
                     /db_xref="CDD:433808"
     Region          576..692
                     /region_name="PspE"
                     /note="Rhodanese-related sulfurtransferase [Inorganic ion
                     transport and metabolism]; COG0607"
                     /db_xref="CDD:440372"
ORIGIN      
        1 mhlrgialla vfgalsspah aqyeqqlgpl agavkqqmle gwtagvqdgw ftlhnptkpd
       61 seqtlymnvg papdsgrvtd vnvvvksanp kasigvalsn rankalclle ltadkntllf
      121 clqgqnrrdi asvpnvakld gsdrirvvel pgaarfivng kqigdvsnep atgaelgima
      181 ydvgtfgiad fkitmtgnes gaapaaaglp arggaggggg gatqkpqapa agqsggdsnp
      241 glpgegpypr fggdtmrivs vyigimrsif mhefghalig elelpstgae edavdiysal
      301 qiveptmyps dnkdvnimaq daakyaalqw yysgklaerr gadassawqd ehtgdlkrfr
      361 nmlcimyggn pavfesiakh vgledrtrar csdefnkqnr awnkilapht rvgtwtpegq
      421 qaanapgapv nvvfqpskrk ignlfannls eaisnnikll geryvlprpv nvvfkdcgql
      481 nawyspregs itmcyelien iavmisdiem gtvggevaaq gggaapgsaa prqqpaqpgq
      541 gmppsaidel kdlgvpattm lftapykgpt pnkiyraqvi ttgdlvgmiq kdknllivdt
      601 sglrdtvpig yplpdagsdg svtdrlqqdl dawllknngg nrkapvvilg agmndrsayn
      661 aalragtlgw tvywyrggve awaanglptt ssmpkm
//
LOCUS       WP_258128962             366 aa            linear   BCT 02-MAR-2025
DEFINITION  pyridoxal-phosphate dependent enzyme [Achromobacter anxifer].
ACCESSION   WP_258128962
VERSION     WP_258128962.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012512.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00291.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..366
                     /product="pyridoxal-phosphate dependent enzyme"
                     /calculated_mol_wt=38470
     Region          53..363
                     /region_name="Trp-synth-beta_II"
                     /note="Tryptophan synthase beta superfamily (fold type
                     II); this family of pyridoxal phosphate (PLP)-dependent
                     enzymes catalyzes beta-replacement and beta-elimination
                     reactions. This CD corresponds to
                     aminocyclopropane-1-carboxylate deaminase (ACCD),
                     tryptophan...; cl00342"
                     /db_xref="CDD:444852"
     Site            order(98..99,125,229..233,332,360..361)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:107206"
     Site            99
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:107206"
ORIGIN      
        1 mqmnpslsgl rcircaslwp padypegcps cleaghpasl eclyepsaad apmplpvldp
       61 vtlgegatpc laapalaqae gvgqlwlkce sanptgshkd rmaaqlvsra rlagatrvaa
      121 assgnagvsl aaycaaarlq adiaitrncp plqreamqrf garltafeds lsrwphvedl
      181 crnhgafagt nylnpptgth aygvegykpi aqeildvcgt psdivvptar gdllwgiflg
      241 wqhllrsgri ermprlhave pyarlsrara tgdarkiwdg vtdqysiagg tstlqsleal
      301 srsggspvev sdasaaqaqq rleriglate lsaaaalaav srlrrsglld aessvvlivt
      361 sdgrrg
//
LOCUS       WP_258128942             483 aa            linear   BCT 02-MAR-2025
DEFINITION  acyl-CoA reductase [Leuconostoc mesenteroides].
ACCESSION   WP_258128942
VERSION     WP_258128942.1
KEYWORDS    RefSeq.
SOURCE      Leuconostoc mesenteroides
  ORGANISM  Leuconostoc mesenteroides
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Leuconostoc.
REFERENCE   1  (residues 1 to 483)
  AUTHORS   Lee,C.Y. and Meighen,E.A.
  TITLE     Cysteine-286 as the site of acylation of the Lux-specific fatty
            acyl-CoA reductase
  JOURNAL   Biochim Biophys Acta 1338 (2), 215-222 (1997)
   PUBMED   9128139
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017686.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05893.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Leuconostoc mesenteroides"
                     /db_xref="taxon:1245"
     Protein         1..483
                     /product="acyl-CoA reductase"
                     /GO_function="GO:0003995 - acyl-CoA dehydrogenase activity
                     [Evidence IEA]"
                     /GO_process="GO:0008218 - bioluminescence [Evidence IEA]"
                     /calculated_mol_wt=53919
     Region          36..465
                     /region_name="ALDH_Acyl-CoA-Red_LuxC"
                     /note="Acyl-CoA reductase LuxC; cd07080"
                     /db_xref="CDD:143399"
     Site            294
                     /site_type="active"
                     /note="putative catalytic cysteine [active]"
                     /db_xref="CDD:143399"
ORIGIN      
        1 mtkinifytp dsiiladlte kvvenethhl vlcypkiteq eikeitkiit hnrnhylkhl
       61 tvneiidiia raaekwtnps yhlrkiaeka vpavtgydad qfslelknfi rlfrkkelkr
      121 fvntelgqsg amlddfqpnl sggfskfygp dlifqifsgn vpgiqlwtli mgllvksptl
      181 gktsfvepim palfvqtlae idpklantia ilpwhnggkf earclnladt ivvcggkeav
      241 asvksktpln kkilsygyki glaivgretl tpeyyaqvik dlaediatyd qqsclapqsi
      301 fierggaitp qefasilsne lnnyqikypr apihesdkia iekmrqeaei tsikngatsv
      361 frsdnstawt iilhnnigfs asplnrsihi fvvndltdlp pvliphqqyl qsagiaispn
      421 rlfsladmlg kvgvnrmsal gkmnhvssgw hhdgrfnlld lvrvtdieqs lefssekfdp
      481 dve
//
LOCUS       WP_258128993             338 aa            linear   BCT 02-MAR-2025
DEFINITION  FecR domain-containing protein [Achromobacter anxifer].
ACCESSION   WP_258128993
VERSION     WP_258128993.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 338)
  AUTHORS   Van Hove,B., Staudenmaier,H. and Braun,V.
  TITLE     Novel two-component transmembrane transcription control: regulation
            of iron dicitrate transport in Escherichia coli K-12
  JOURNAL   J Bacteriol 172 (12), 6749-6758 (1990)
   PUBMED   2254251
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016648.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04773.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..338
                     /product="FecR domain-containing protein"
                     /calculated_mol_wt=36595
     Region          16..334
                     /region_name="PRK09774"
                     /note="fec operon regulator FecR; Reviewed"
                     /db_xref="CDD:236622"
ORIGIN      
        1 mssgagvsvd pvaeqaiaww vrlqsgmega aarrscedwl aqdpahrqaw drlqrisqda
       61 rrvpaalahs alahsaltqs althsgpgha alaaprssgr rtvlrgllmi ggtavagwag
      121 yrhapwqrla admstsvger lavavadglh itlnsdsavr lhlrddargi dllrgeilvr
      181 telrpgmpel rvdtgygelh aeqarfdlrr taagarvgvy egsvvllreg vathadager
      241 lafggrgeih rraadpdrla wadglvvakd wrldyfaqyl arqrtgvirv dpsvadlrls
      301 gvfplddaer alkalepalp irvtrhtqyw lqvsarea
//
LOCUS       WP_258128683              30 aa            linear   BCT 02-MAR-2025
DEFINITION  phage holin, partial [Lacticaseibacillus rhamnosus].
ACCESSION   WP_258128683
VERSION     WP_258128683.1
KEYWORDS    RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (residues 1 to 30)
  AUTHORS   Grundling,A., Manson,M.D. and Young,R.
  TITLE     Holins kill without warning
  JOURNAL   Proc Natl Acad Sci U S A 98 (16), 9348-9352 (2001)
   PUBMED   11459934
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016419.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04531.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..30
                     /organism="Lacticaseibacillus rhamnosus"
                     /db_xref="taxon:47715"
     Protein         1..>30
                     /product="phage holin"
     Region          2..>30
                     /region_name="Phage_holin_1"
                     /note="Bacteriophage holin; cl02344"
                     /db_xref="CDD:470542"
ORIGIN      
        1 mkinwkvrvl svkfwlalvp aallvvqtva
//
LOCUS       WP_258129043             273 aa            linear   BCT 02-MAR-2025
DEFINITION  PD-(D/E)XK nuclease-like domain-containing protein [Escherichia
            coli].
ACCESSION   WP_258129043
VERSION     WP_258129043.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024096.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12684.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..273
                     /product="PD-(D/E)XK nuclease-like domain-containing
                     protein"
                     /calculated_mol_wt=31529
     Region          <1..267
                     /region_name="PRK09709"
                     /note="exodeoxyribonuclease VIII"
                     /db_xref="CDD:236615"
ORIGIN      
        1 mntgiyfdis nedyhagdgv sksqldmvak npallkwvqa apedeekksa ldmgtalhcl
       61 llepgefdkr fivspkfdrr tkqgkadeea flrdvadmgi tvldveqwrk lelmrdstma
      121 hpaarwmlea pgyceasmyw ndeetgelcr irpdkwlneh nvivdvkkva dmdrfarhie
      181 efryhvqdam yregammvtg qphgffflav sesidcgryp vrvfeldvpd vdaghalfrr
      241 dlntyhecri ndewggveii krpdwarkqd myv
//
LOCUS       WP_258129011             326 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4434 domain-containing protein [Achromobacter anxifer].
ACCESSION   WP_258129011
VERSION     WP_258129011.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025841.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14488.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..326
                     /product="DUF4434 domain-containing protein"
                     /calculated_mol_wt=36351
     Region          10..>62
                     /region_name="FcbT1"
                     /note="TRAP-type mannitol/chloroaromatic compound
                     transport system, periplasmic component [Secondary
                     metabolites biosynthesis, transport and catabolism];
                     COG4663"
                     /db_xref="CDD:443700"
     Region          39..204
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
ORIGIN      
        1 mqalapasps rrrllrglgv aalaaslpac apawslqstf wqlwpshlel spqawrerma
       61 amhglgfrei iiqwvgasgg aqpwqlpaat lallfdeaqr lgmdlqlglp yderwwrqlg
      121 npddaalaaf lqaaqeqala yarasdvtgl aafrgwyipy eieqhswatp errerlaqwl
      181 rglaeplaqq vgrmptisty hsklpgplsl adlwsgllda vklrpmlqdg vgvsgmeaye
      241 aleplhrlll arrapfdliv elfeelpser qdgttfnars asasrirqql riarryraqs
      301 vvafaadpwl igptpeaerl rrewpl
//
LOCUS       WP_258129060             442 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Achromobacter anxifer].
ACCESSION   WP_258129060
VERSION     WP_258129060.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 442)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 442)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 442)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 442)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..442
                     /product="ATP-binding protein"
                     /calculated_mol_wt=47700
     Region          22..147
                     /region_name="2CSK_N"
                     /note="Two-component sensor kinase N-terminal; pfam08521"
                     /db_xref="CDD:430051"
     Region          <108..438
                     /region_name="PRK10337"
                     /note="sensor protein QseC; Provisional"
                     /db_xref="CDD:182388"
ORIGIN      
        1 msiplsyslr arllffllaa ivvgalvqgt iayrstlaqa ddifdsllqr talslgtgng
       61 llttdpahar gagspvaddf iiqiwtpdgv rvfnsrsrrp lpdqivlgfs darmegstyr
      121 vyslatpfqv iqvaqdmavr tsmaralalr tiapiaaaap llmlivwcvv swslrpvkra
      181 raqvaarqpe dlspvsvegl pdeirplvle lnlllermrg afaqqkqfvg daahelrspl
      241 aalrlqlqal qragdgdarr laeqrlaagi dratrlveql lsmarhesaa gqtapvavdl
      301 advlrqalse mlpqanakai sidldgapqa wvqgnrdalt llarnlldna ikytpagkri
      361 hlhleqqpgk aalliddegp giapeerarv fdrfyrvegn aqhgsglgla iaraiadqhr
      421 atmelqdapd gpglrvkvvf pa
//
LOCUS       WP_258129216             605 aa            linear   BCT 02-MAR-2025
DEFINITION  DNA cytosine methyltransferase [Achromobacter anxifer].
ACCESSION   WP_258129216
VERSION     WP_258129216.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012372.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00145.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..605
                     /product="DNA cytosine methyltransferase"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=65558
     Region          10..>244
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
     Region          <508..572
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
ORIGIN      
        1 misdinhfhl fsgagvgaag mqdarpeipg lrgrmiclgg idvdaagaad fhqftgvhct
       61 vrdlfsrqqy tafharepag gwveampqdi rvaaggrrpn imflsapckg fsgllshsrs
      121 ltakyqalne ltlrgvwlal eawkddpvev ilfenvpria srgrhfldqi vqllrhygyv
      181 vretahdcge lgglaqsrkr flliarhaek vpafiyeppk rplravgeil grmhlpgdlr
      241 agpmhripnl swktwvrlaf veagsdwrsl nrltvqdgyl qdyllvpemr rgalgvhgme
      301 nsagviaarn yplngafsva dprfdpsaaw kdgqaygvrr wdastgaiag qqgpgqgays
      361 vadprhhgpa khsnefrivr ydaparavtg ahgtgqcvad prggpdsskl hgkfhtaawd
      421 ehshaviagy angafavadp rpglarergd hyltaghygv aawdqhvgav sasachdngs
      481 wsvadprtlp aandklvcri vaedgtwhrp fttlelaalq slydpddyae aeergevfqm
      541 dgssdsahre rignavprka akamaeeigr aillsrages fqlsstpiwv rpiatalavh
      601 ggeas
//
LOCUS       WP_258129226             202 aa            linear   BCT 02-MAR-2025
DEFINITION  putative metallopeptidase [Achromobacter anxifer].
ACCESSION   WP_258129226
VERSION     WP_258129226.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039181.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18894.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..202
                     /product="putative metallopeptidase"
                     /EC_number="3.4.24.-"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=21813
     Region          28..180
                     /region_name="PhageMetallopep"
                     /note="Putative phage metallopeptidase; pfam18894"
                     /db_xref="CDD:465902"
ORIGIN      
        1 makrpalmrp appeqlagfv papellawae qtilapggpl hnpdhahlvd adlaflwapg
       61 afekagrtvl gqaeqvmfra ggwqkarqeq qmiewfgrvp eflitlaady cglctdaefc
      121 alvehelyhl gqrtdefgap afdkegrpkl rivghdveef vgvvarygag tdvqrlvaaa
      181 adaptmprln iaracgcclk aa
//
LOCUS       WP_258129288             172 aa            linear   BCT 02-MAR-2025
DEFINITION  transcription termination/antitermination NusG family protein
            [Escherichia coli].
ACCESSION   WP_258129288
VERSION     WP_258129288.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014417.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02357.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..172
                     /product="transcription termination/antitermination NusG
                     family protein"
                     /GO_process="GO:0006354 - DNA-templated transcription
                     elongation [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /GO_process="GO:0140673 - transcription elongation-coupled
                     chromatin remodeling [Evidence IEA]"
                     /calculated_mol_wt=19774
     Region          5..103
                     /region_name="NGN_SP_AnfA1"
                     /note="N-Utilization Substance G (NusG) N-terminal domain
                     in the NusG Specialized Paralog (SP), AnFA1; cd09894"
                     /db_xref="CDD:193583"
ORIGIN      
        1 mkgqkqfyll qcsphfhqsv llqlsrsgia yynpvirtfy krrdcsayrg qimpmfpgyv
       61 fvlldfevvh pscftrmknv yglvsfgeyp aevplsiine vkeqekifsm nlslmnnscl
      121 akillladas krgqvfadyv cnrkydrlkn dsykrkaeta tqctlpsyrs sc
//
LOCUS       WP_258129294             261 aa            linear   BCT 02-MAR-2025
DEFINITION  AraC family transcriptional regulator [Escherichia coli].
ACCESSION   WP_258129294
VERSION     WP_258129294.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 261)
  AUTHORS   Saviola,B., Seabold,R. and Schleif,R.F.
  TITLE     Arm-domain interactions in AraC
  JOURNAL   J Mol Biol 278 (3), 539-548 (1998)
   PUBMED   9600837
REFERENCE   2  (residues 1 to 261)
  AUTHORS   Seabold,R.R. and Schleif,R.F.
  TITLE     Apo-AraC actively seeks to loop
  JOURNAL   J Mol Biol 278 (3), 529-538 (1998)
   PUBMED   9600836
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012392.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00165.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..261
                     /product="AraC family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_function="GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=29946
     Region          43..251
                     /region_name="PRK09940"
                     /note="transcriptional regulator YdeO; Provisional"
                     /db_xref="CDD:182157"
     Region          <146..240
                     /region_name="PRK15044"
                     /note="transcriptional regulator SirC; Provisional"
                     /db_xref="CDD:185004"
ORIGIN      
        1 mlpfkkmifn kytliyvtss nvrihlsgqd elelikdtlf liekkskvig ysgnisksdv
       61 vciddediek virflpdkni hnnvstppii vvpkligdek kifrllkedl ssfrrvsill
      121 filsrievei ltnflryskp vslisdkiss lieedlssaw kigdmaaalh tsvsslrrrl
      181 kdedytftqi nldtkmrnal rlidcscgni siiasmlgyk seayfiavfk ryyditpkqf
      241 ylqskrqrss srllrsnlsv e
//
LOCUS       WP_258129324             835 aa            linear   BCT 02-MAR-2025
DEFINITION  fimbria/pilus outer membrane usher protein [Escherichia coli].
ACCESSION   WP_258129324
VERSION     WP_258129324.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 835)
  AUTHORS   Huang,Y., Smith,B.S., Chen,L.X., Baxter,R.H. and Deisenhofer,J.
  TITLE     Insights into pilus assembly and secretion from the structure and
            functional characterization of usher PapC
  JOURNAL   Proc Natl Acad Sci U S A 106 (18), 7403-7407 (2009)
   PUBMED   19380723
REFERENCE   2  (residues 1 to 835)
  AUTHORS   Remaut,H., Tang,C., Henderson,N.S., Pinkner,J.S., Wang,T.,
            Hultgren,S.J., Thanassi,D.G., Waksman,G. and Li,H.
  TITLE     Fiber formation across the bacterial outer membrane by the
            chaperone/usher pathway
  JOURNAL   Cell 133 (4), 640-652 (2008)
   PUBMED   18485872
REFERENCE   3  (residues 1 to 835)
  AUTHORS   Jacob-Dubuisson,F., Striker,R. and Hultgren,S.J.
  TITLE     Chaperone-assisted self-assembly of pili independent of cellular
            energy
  JOURNAL   J Biol Chem 269 (17), 12447-12455 (1994)
   PUBMED   7909802
REFERENCE   4  (residues 1 to 835)
  AUTHORS   Schifferli,D.M. and Alrutz,M.A.
  TITLE     Permissive linker insertion sites in the outer membrane protein of
            987P fimbriae of Escherichia coli
  JOURNAL   J Bacteriol 176 (4), 1099-1110 (1994)
   PUBMED   7906265
REFERENCE   5  (residues 1 to 835)
  AUTHORS   Van Rosmalen,M. and Saier,M.H. Jr.
  TITLE     Structural and evolutionary relationships between two families of
            bacterial extracytoplasmic chaperone proteins which function
            cooperatively in fimbrial assembly
  JOURNAL   Res Microbiol 144 (7), 507-527 (1993)
   PUBMED   7906046
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012786.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00577.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..835
                     /product="fimbria/pilus outer membrane usher protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015473 - fimbrial usher porin activity
                     [Evidence IEA]"
                     /GO_process="GO:0009297 - pilus assembly [Evidence IEA]"
                     /calculated_mol_wt=91507
     Region          1..833
                     /region_name="PRK15284"
                     /note="putative fimbrial outer membrane usher protein
                     StfC; Provisional"
                     /db_xref="CDD:185184"
ORIGIN      
        1 mknnisfavn sityalmlsl agapayavdf ntdvldaadr qnidfsrfsq agyilpgqyq
       61 meimvndqgi spsafpvtfl eppvsgqdgk kplpqacltp emvsrmglte asqekvtywn
      121 ngqcadfsrl pgveirpnpa egmlyinmpq awleysdasw lppsrwdngi pgllfdynin
      181 gtvnkphkgk qsqslsyngt aganfgawrl radyqgnlnh ttgsgqgtds qftwsrfymy
      241 raiprwranl tlgenyinse ifsswrytga slesddrmlp pklrgyapqv sgiadtnarv
      301 visqqgrily dstvpagpft iqdldssvrg rldvevieqd grkktfqvdt ayvpyltrpg
      361 qiryklvsgr srnyehtteg pvfaageasw gisnkwslyg ggivagdyna lavglgrdln
      421 efgtvsadvt wsvaripged tkqgkswrls yskrfddmna ditfagyrfs ernymtmdqy
      481 lnaryrndft grekelytvt lnknfedwkt svnlqyshqt ywdrrasdyy tlsvnryfda
      541 fgfknislgl sasrskyqnr dndsafvrls vpwgtgtasy sgsmsndryt ntvgysdtln
      601 kglssyslna gvssgggqps qsqmsayynh ssplanlsan fsavengyts fgmsasggat
      661 itakgaalha ggmnggtrll vdtdgvggvp vdggrvstnr wgigvvtdvs syyrnttsvd
      721 lnklpedmea trsvvesvlt egaigyrefe vlkgsrlfav lrladnshpp fgasvtnakg
      781 relgmvadsg lawlsgvnpg etlnvgwdgr tqcvvdipak lapaqqlllp crkan
//
LOCUS       WP_258129335             636 aa            linear   BCT 02-MAR-2025
DEFINITION  PAAR domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_258129335
VERSION     WP_258129335.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017315.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05488.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>636
                     /product="PAAR domain-containing protein"
     Region          <252..305
                     /region_name="PAAR_RHS"
                     /note="proline-alanine-alanine-arginine (PAAR) domain,
                     also containing C-terminal Rearrangement hotspot (Rhs)
                     extensions; cd14742"
                     /db_xref="CDD:269827"
     Region          <389..633
                     /region_name="RhsA"
                     /note="Uncharacterized conserved protein RhaS, contains 28
                     RHS repeats [General function prediction only]; COG3209"
                     /db_xref="CDD:442442"
     Region          393..465
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
ORIGIN      
        1 msegpggpqg ataggtlamr mlsqqamvas qmkraandka iaqmlaskks gppaarlgde
       61 iqhksflgal agavlgaivt iaegclimaa catgpyalvl vpalmyasyk asdyveekqn
      121 qleswinsfc dtdgaintgs envkingela araavtlppp pppgaipevp qgepswgdia
      181 tdllesaaek avplakawgn avitltdsna gfmdrvsaga sllfpagpvl mefatmvggr
      241 geikkevdfp eagedtalcd kenkppriaq gssnvfinnq paarkgdkle csaaivggsp
      301 dvfiggeqvt yldiqpefpp wqrmilggit iasyllppag llgklknlar lgklgnllgk
      361 sgkllgaklg allgktgksl ksiankvirw vtdpvdpvtg aycdertdft lgqtlplsft
      421 rfhssvlplh gltgvgwsds wseyawvreq gnrvdiisqg atlrfafdgd sdttvnpyha
      481 qyilrrrddy lelfdrdals srffydafpg mrlrhpvtdd tsddrlahsp ndrmymlggm
      541 sdtasnritf erdsqyritg vshtdgirlk ltyhasgylk aihrtdngiq tlatyeqdar
      601 grlteadarl dyhlfyeyda adriirwsdn dqtwsr
//
LOCUS       WP_258129372             265 aa            linear   BCT 02-MAR-2025
DEFINITION  AHH domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_258129372
VERSION     WP_258129372.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 265)
  AUTHORS   Zhang,D., Iyer,L.M. and Aravind,L.
  TITLE     A novel immunity system for bacterial nucleic acid degrading toxins
            and its recruitment in various eukaryotic and DNA viral systems
  JOURNAL   Nucleic Acids Res 39 (11), 4532-4552 (2011)
   PUBMED   21306995
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025769.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14412.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..265
                     /product="AHH domain-containing protein"
     Region          <4..124
                     /region_name="RhsA"
                     /note="Uncharacterized conserved protein RhaS, contains 28
                     RHS repeats [General function prediction only]; COG3209"
                     /db_xref="CDD:442442"
     Region          126..226
                     /region_name="AHH"
                     /note="A nuclease family of the HNH/ENDO VII superfamily
                     with conserved AHH; pfam14412"
                     /db_xref="CDD:464166"
ORIGIN      
        1 nhavsdltgr plmlfnsegk tvwrpgqtsl wglalslpad tdypdprgel dpeadpglly
       61 agqwqdaesg lcynrfryye pesgmylvsd plglqggeqt yryvpnpcgy vdplglvgcs
      121 tklgknmmea mglarsttwk gyrahhiipk elwnhpvlqk ikydidkatn giflrkvddg
      181 vsamarhqgn hdgytqvikd aldkidinqs tdvitkqiee iqkiarngle ngypvrpldm
      241 dsiggaagns kvysiwtkif dkggw
//
LOCUS       WP_258129189             323 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase family 9 protein [Achromobacter anxifer].
ACCESSION   WP_258129189
VERSION     WP_258129189.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 323)
  AUTHORS   Kadrmas,J.L. and Raetz,C.R.
  TITLE     Enzymatic synthesis of lipopolysaccharide in Escherichia coli.
            Purification and properties of heptosyltransferase i
  JOURNAL   J Biol Chem 273 (5), 2799-2807 (1998)
   PUBMED   9446588
REFERENCE   2  (residues 1 to 323)
  AUTHORS   Campbell,J.A., Davies,G.J., Bulone,V. and Henrissat,B.
  TITLE     A classification of nucleotide-diphospho-sugar glycosyltransferases
            based on amino acid sequence similarities
  JOURNAL   Biochem J 326 (Pt 3) (Pt 3), 929-939 (1997)
   PUBMED   9334165
  REMARK    Erratum:[Biochem J 1998 Feb 1;329(Pt 3):719]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013257.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01075.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..323
                     /product="glycosyltransferase family 9 protein"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=34330
     Region          12..>117
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     Region          71..302
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
ORIGIN      
        1 msdisclyvr lpnwvgdvcm slpslralha sglplvicar pwardlldgv akqdfipmrg
       61 kvgpdraavs ahrrglgaqg rrarglllpd slssalvfrl aglpsagyrd dgrsfllrwp
      121 vnkpddslha vqswhyltrq altrwglpsg paepgptldl pltpahrsaa dlaleaagla
      181 gqrfvliapt atglhkgkik vwpgfdtltr alqarghtvv mcpppaetee arrnaptall
      241 lpplslgafa altaraalvi cndsgvshva aaaaareltl fgvtrpgrtg pwspravcvg
      301 sehawpsvee veqqanilld etq
//
LOCUS       WP_258129432             179 aa            linear   BCT 02-MAR-2025
DEFINITION  terminase gpA endonuclease subunit, partial [Escherichia coli].
ACCESSION   WP_258129432
VERSION     WP_258129432.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 179)
  AUTHORS   Ortiz,D., delToro,D., Ordyan,M., Pajak,J., Sippy,J., Catala,A.,
            Oh,C.S., Vu,A., Arya,G., Feiss,M., Smith,D.E. and Catalano,C.E.
  TITLE     Evidence that a catalytic glutamate and an 'Arginine Toggle' act in
            concert to mediate ATP hydrolysis and mechanochemical coupling in a
            viral DNA packaging motor
  JOURNAL   Nucleic Acids Res 47 (3), 1404-1415 (2019)
   PUBMED   30541105
REFERENCE   2  (residues 1 to 179)
  AUTHORS   delToro,D., Ortiz,D., Ordyan,M., Sippy,J., Oh,C.S., Keller,N.,
            Feiss,M., Catalano,C.E. and Smith,D.E.
  TITLE     Walker-A Motif Acts to Coordinate ATP Hydrolysis with Motor Output
            in Viral DNA Packaging
  JOURNAL   J Mol Biol 428 (13), 2709-2729 (2016)
   PUBMED   27139643
REFERENCE   3  (residues 1 to 179)
  AUTHORS   Andrews,B.T. and Catalano,C.E.
  TITLE     The enzymology of a viral genome packaging motor is influenced by
            the assembly state of the motor subunits
  JOURNAL   Biochemistry 51 (46), 9342-9353 (2012)
   PUBMED   23134123
REFERENCE   4  (residues 1 to 179)
  AUTHORS   Ortega,M.E., Gaussier,H. and Catalano,C.E.
  TITLE     The DNA maturation domain of gpA, the DNA packaging motor protein
            of bacteriophage lambda, contains an ATPase site associated with
            endonuclease activity
  JOURNAL   J Mol Biol 373 (4), 851-865 (2007)
   PUBMED   17870092
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042573.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20454.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>179
                     /product="terminase gpA endonuclease subunit"
                     /GO_function="GO:0004519 - endonuclease activity [Evidence
                     IEA]"
     Region          <1..>179
                     /region_name="gpA1"
                     /note="Phage terminase, large subunit GpA [Mobilome:
                     prophages, transposons]; COG5525"
                     /db_xref="CDD:444276"
ORIGIN      
        1 wpcphcgeyf qpcgdvvagf rdiadpvlas eaayiqcpsc sgrilpeqkr elngrgvwlr
       61 dgesinadgs rygdprrsri asfwmegpaa ayqtlsqlvy klltaeqeye ttgseetlkt
      121 vintdwglpy lprasmeqrk selleqraep vpsrsvpdgv nflvatvdvq agrhrrfvv
//
LOCUS       WP_258129448             126 aa            linear   BCT 02-MAR-2025
DEFINITION  hemagglutinin repeat-containing protein, partial [Escherichia
            coli].
ACCESSION   WP_258129448
VERSION     WP_258129448.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024728.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13332.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>126
                     /product="hemagglutinin repeat-containing protein"
ORIGIN      
        1 sgmlsktttt thdvtdrrtm tgselsggtv tigaghnlnv agssvvgdnr vslaagnnls
       61 igtltesnre thlkqekksg lmssggvgfs vgsqslkvtd aatdttqkgs tvgsvhgdvs
      121 lqagnr
//
LOCUS       WP_258129524             335 aa            linear   BCT 02-MAR-2025
DEFINITION  2Fe-2S iron-sulfur cluster-binding protein [Achromobacter anxifer].
ACCESSION   WP_258129524
VERSION     WP_258129524.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012339.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00111.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..335
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /GO_function="GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /calculated_mol_wt=36879
     Region          1..328
                     /region_name="PRK07609"
                     /note="CDP-6-deoxy-delta-3,4-glucoseen reductase;
                     Validated"
                     /db_xref="CDD:181058"
ORIGIN      
        1 mayrvhilqt desfqveege svlqaaersa vrlpqectfg gcgtcrikle sgaveyeefp
       61 maltpeeaae gyalacqarp lgdlcisvas srqtfpeprr lpatihrier fcddvihltl
      121 alpeagldyv pgqymnvvlp dgetrsfsma sapagnlvdf hvrripggry tdqwlgqaqa
      181 gagleieapl gvfsyheedw rplimmatgt giapikaile slldnedcpp vtlywgmrte
      241 adlylrdvie swagrlyefn fvpvlsraga dwqgrrghvq qavmedhedl sehaiylcga
      301 pdmireaksl laargasldh myadsftfqh alaaa
//
LOCUS       WP_258129528             331 aa            linear   BCT 02-MAR-2025
DEFINITION  tripartite tricarboxylate transporter substrate-binding protein
            [Achromobacter anxifer].
ACCESSION   WP_258129528
VERSION     WP_258129528.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 331)
  AUTHORS   Winnen,B., Hvorup,R.N. and Saier,M.H. Jr.
  TITLE     The tripartite tricarboxylate transporter (TTT) family
  JOURNAL   Res Microbiol 154 (7), 457-465 (2003)
   PUBMED   14499931
REFERENCE   2  (residues 1 to 331)
  AUTHORS   Antoine,R., Jacob-Dubuisson,F., Drobecq,H., Willery,E., Lesjean,S.
            and Locht,C.
  TITLE     Overrepresentation of a gene family encoding extracytoplasmic
            solute receptors in Bordetella
  JOURNAL   J Bacteriol 185 (4), 1470-1474 (2003)
   PUBMED   12562821
REFERENCE   3  (residues 1 to 331)
  AUTHORS   Sweet,G.D., Kay,C.M. and Kay,W.W.
  TITLE     Tricarboxylate-binding proteins of Salmonella typhimurium.
            Purification, crystallization, and physical properties
  JOURNAL   J Biol Chem 259 (3), 1586-1592 (1984)
   PUBMED   6141166
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015366.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03401.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..331
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /calculated_mol_wt=34320
     Region          29..317
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mqiavslprr rlvstlalga lgaaagrlqa vpltrilvgf ppgggvdvia rllarqleag
       61 lgevvlvenr pgqggllaaq allaarpdgr tlmftndhal aivphiveqa gyaspddfaa
      121 vaqvtdkaam glavkadspl qsledlrahq dalfvgvpap gsipelaldl lgahlgvvat
      181 aipyrggapl vtdlqggyla lgmtslaell epvragrlri laisgpdrhp avadvptfae
      241 qgiaglergg vaglfaprgv aparieqlqr qvaraleses vrqqlsrqgs rlnygdsatl
      301 arnmcaihra waeraeawra rpgrqadass a
//
LOCUS       WP_258129588             355 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Achromobacter anxifer].
ACCESSION   WP_258129588
VERSION     WP_258129588.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 355)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 355)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..355
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=40166
     Region          32..277
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(94,96,98..99,203..204,222,267)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 mnpneqklqy pwtdfqpeag rshvvadgvk wirmplpfal dhinlwllrd nidgrdgwti
       61 vdcgitrdev ktlwervfet eleglpvlrv ivthmhpdhi glahwlcerw naplwmtmtd
      121 fmvaslwssr rgesgggpgg qsavehfarh gltdpdaqeq irqrasyypn lvpavparyt
      181 rimhgdavri ggrdwrvivg yghapehasl ysrdlrvlis gdmvlprist nvsvfdyepd
      241 anplplylrs ldgyadlped tlvlpshgrp fkglheritq qhehhrdrla evleacaaqp
      301 qsttdivpvl fkrkldlhql tfamgealah lhalyfegkl kraqgadgiv rftav
//
LOCUS       WP_258129756             324 aa            linear   BCT 02-MAR-2025
DEFINITION  metal ABC transporter substrate-binding protein [Achromobacter
            anxifer].
ACCESSION   WP_258129756
VERSION     WP_258129756.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10100136
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..324
                     /product="metal ABC transporter substrate-binding protein"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /GO_process="GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /calculated_mol_wt=34236
     Region          18..322
                     /region_name="PsaA"
                     /note="Metal binding protein PsaA. These proteins have
                     been shown to function as initial receptors in ABC
                     transport of Mn2+ and as surface adhesins in some
                     eubacterial species. They belong to the TroA superfamily
                     of periplasmic metal binding proteins that...; cd01137"
                     /db_xref="CDD:238557"
     Site            order(67,154,220,295)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:238557"
ORIGIN      
        1 mrthslarrr allamaglcl savlgsghaa eplkavasfs ilgdivrevg ggdvsvatlv
       61 gpdgdaheye ptpgdakkla aarvlfvngl dfetwmprla kasgfagatv vasqgvtprk
      121 faggghddgh dhdhghdhsh dhdhghqhgd adphawqnla ngviyarnva eglaaadpah
      181 adayrqraqa yiarlqalda qvrktfaaip aerrkivtsh dafgyfgday gvafipamgv
      241 stdaepsage variieqvkr ervpavfven issprlvqqi aretgakvgg tlysdalskp
      301 gqpgatylem fewnvrqlaa amqp
//
LOCUS       WP_258129598             292 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR family transcriptional regulator [Achromobacter anxifer].
ACCESSION   WP_258129598
VERSION     WP_258129598.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 292)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012354.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00126.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..292
                     /product="LysR family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=32231
     Region          1..286
                     /region_name="PRK11139"
                     /note="DNA-binding transcriptional activator GcvA;
                     Provisional"
                     /db_xref="CDD:182990"
ORIGIN      
        1 mlkqwpplnv lrgfeaaarl gsfhkaadel hltqsaisqq vrsledylgq plffrqgrav
       61 sltdagwdll gttqamlqql aagirrldqy rkpdqlivnt spafsrhwll prldafralh
      121 peadlwlyts daapdmaaqt idiavrddlg pqadcafrvl vedrlypach prllaadgra
      181 tlhgeremdw shwetqggad vgqrgqgmnf sdpgqlldaa reglgmalvs gllaerwrrd
      241 gslaalteqt vrgpkwawlv hrdsqddplt rafcewvsge lgasredggt aa
//
LOCUS       WP_258129327             203 aa            linear   BCT 02-MAR-2025
DEFINITION  YfdX family protein [Escherichia coli].
ACCESSION   WP_258129327
VERSION     WP_258129327.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 203)
  AUTHORS   Nishino,K., Inazumi,Y. and Yamaguchi,A.
  TITLE     Global analysis of genes regulated by EvgA of the two-component
            regulatory system in Escherichia coli
  JOURNAL   J Bacteriol 185 (8), 2667-2672 (2003)
   PUBMED   12670992
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022391.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10938.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..203
                     /product="YfdX family protein"
                     /calculated_mol_wt=22172
     Region          1..202
                     /region_name="YfdX"
                     /note="YfdX protein; cl26486"
                     /db_xref="CDD:452621"
ORIGIN      
        1 mkrilttial aaslaasvav adtktqdtsa ahhpvvtsek mkmeqrgini mrdiqyarlt
       61 lfsgdtegav klindankll tseditwaql vrkdkktpqe gdvyviinsq ltlaedftat
      121 pekqkaidea nkkldkgdkk gaieklqlag inisetqwlm plkqtqqkvk saqslmaegk
      181 yyeanlalkg aedgtimdtv slh
//
LOCUS       WP_258129787             869 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: M36 family metallopeptidase [Flavobacterium].
ACCESSION   WP_258129787
VERSION     WP_258129787.1
KEYWORDS    RefSeq.
SOURCE      Flavobacterium
  ORGANISM  Flavobacterium
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014214.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02128.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..869
                     /organism="Flavobacterium"
                     /db_xref="taxon:237"
     Protein         1..869
                     /product="M36 family metallopeptidase"
                     /GO_component="GO:0005615 - extracellular space [Evidence
                     IEA]"
                     /GO_function="GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /GO_function="GO:0008270 - zinc ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=96673
     Region          1..869
                     /region_name="T9SSA_dep_M36"
                     /note="T9SS-dependent M36 family metallopeptidase;
                     NF038113"
                     /db_xref="CDD:468356"
ORIGIN      
        1 msqteidhli isdefittsn ntvchvkqtq ngipiynvds nflidkagkv sgnlksvpll
       61 enktknrfqk idfktalaha fastndiiqe yrfnklennk frlenslnke ddvngqlvyf
      121 ltnknelkla yffeyysgnd eknlwhifvd setgniikks nktlkcsfhk ennhttnnpl
      181 flfkpdnfsk lalltpgttn ynvipwnyes pnhyreafpt niegrtmvtn pesttalapl
      241 taaaspngwh nnnstigstt nttnfqytrg nnvfaysdin nsepsissin tytnssfgty
      301 pnltfdypys glsnaplnei naattnlfym nnimhdlwyq ygfdeinknf qdknygrggk
      361 qgdfvlaqsq dnsqsrlpsy nnanfstpid gsnpkmqmyl wqhiapikvq itsgtllnkt
      421 ynamdnnfdt ghielpitpt nmsgeltlln datspdvndg csaatntltn kiavvrrgnc
      481 nfsskaiaaq nagakalivv nnsiiplelg ggdiaikipv iglsktdgde liqalktenn
      541 intilenkny vyadgdfdng iiaheyghgi strlsgncld sseqmgegws dwfwlmmqik
      601 egdkgndkks tgtftnnqpt ngkgirkypy ttdmnsnpyt yahlnkmwyl dpadatekin
      661 vhaigtvwat ilwdltwayi nkygydpniy ngkggnnkvm kivldgikid gcspsfitgr
      721 dailaadqaa tggqdyeliw rvfarrgvgy sassgasnig vagikdnpts lqtdlppnia
      781 lsnedfisnn lvnvypnpsn glinisfdrt pnhftlkind ingrivytee itnntrdvqt
      841 inldslqkgf yilslkssti nftqkille
//
LOCUS       WP_258129911             297 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR family transcriptional regulator [Achromobacter anxifer].
ACCESSION   WP_258129911
VERSION     WP_258129911.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 297)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012354.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00126.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..297
                     /product="LysR family transcriptional regulator"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=32403
     Region          2..297
                     /region_name="nhaR"
                     /note="transcriptional activator NhaR; Provisional;
                     PRK11062"
                     /db_xref="CDD:182938"
ORIGIN      
        1 mlnyrhlyyf wmvakeggfs raaerldmai qtisaqvrel eknlghqllk pagrgvaltd
       61 ageaafarae eifqigqvlp qevraaatkp amrlsvglsd gisklaaqal lgpvlhtpdl
      121 rltchegeve ellgelaqhh ldlvlagqga panpnlrlts drlvsspvdw ygpaklvrks
      181 dtldfpqcle rlpvllptgh svlrqtldrw fgeqgiypnv vgefedsalm svfaarglgv
      241 fplsrlgggd igvlrglrpl arcddvheei hairnrrgqh hplvqiilae aktsvfs
//
LOCUS       WP_258129828            1064 aa            linear   BCT 02-MAR-2025
DEFINITION  PAAR domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_258129828
VERSION     WP_258129828.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017315.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05488.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>1064
                     /product="PAAR domain-containing protein"
     Region          <252..305
                     /region_name="PAAR_RHS"
                     /note="proline-alanine-alanine-arginine (PAAR) domain,
                     also containing C-terminal Rearrangement hotspot (Rhs)
                     extensions; cd14742"
                     /db_xref="CDD:269827"
     Region          393..454
                     /region_name="DUF6531"
                     /note="Domain of unknown function (DUF6531); pfam20148"
                     /db_xref="CDD:466309"
     Region          <569..>1040
                     /region_name="RHS_core"
                     /note="RHS element core protein; NF041261"
                     /db_xref="CDD:469161"
ORIGIN      
        1 msegpggpqg ataggtlamr mlsqqamvas qmkraandka iaqmlaskks gppaarlgde
       61 iqhksflgal agavlgaivt iaegclimaa catgpyalvl vpalmyasyk asdyveekqn
      121 qleswinsfc dtdgaintgs envkingkpa araavtlppp pppgaipevp qgepswgdia
      181 tdllesaaek avplakawgn avitltdsna gfmdrvsaga sllfpagpvl mefatmvggr
      241 geikkdvdfp eagedtalcd kenkppriaq gssnvfinnq paarqgdkle csaaivggsp
      301 dvfiggeqvt yldiqpefpp wqrmilggit iasyllppag llgklknlar lgklgnllgk
      361 sgkllgaklg allgktgksl ksiankvirw vtdpvdpvtg aycdertdft lgqtlplsft
      421 rfhssvlplh gltgvgwsds wseyawvreq gnrvdiislg atlnfafdge sdtavnpyha
      481 qyilrrrddy lelfdrdals srffydafpg mrlrhpvtdd tsddrlahsp gdrmymlggm
      541 sdtasnritf erdsqyritg vshtdgirlk ltyhasgylk aihrtdngiq tlatyeqdar
      601 grlteadarl dyhlfyeyda adriirwsdn dqtwsrftyd aqgrcvnvtg aegyynatld
      661 ygdgcttvtd gkgihryyyd pdgnilreea pdgstttyew defhhllarh spagrvekfe
      721 ynaahgqlsr ytaadgaewl yryderglfs nitdpagqtw tqlcderglp vslvspqgee
      781 trlaytaqgl lsgifrqder rlgieydhhn rpetltdvmg rehhteysgh dlpvkmrgpg
      841 gqsvrlqwqq hhklsgiera gtgaegfryd rhgnllaytd gngvvwtmey gpfdlpvart
      901 dgeghrwqyr ydkdtlqlte vinpqgesyl yvldncgrvt eerdwggvvw ryrydadglc
      961 tarvngleet ilysrdaagr laevispegk tqyaydksgr ltgifspdgt sqrtgyderg
     1021 rvnvttqgrr aieyhypdeh tvircilppe derdrhpdes llkt
//
LOCUS       WP_258130033             153 aa            linear   BCT 02-MAR-2025
DEFINITION  substrate-binding domain-containing protein, partial [Escherichia
            coli].
ACCESSION   WP_258130033
VERSION     WP_258130033.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 153)
  AUTHORS   Swint-Kruse,L. and Matthews,K.S.
  TITLE     Allostery in the LacI/GalR family: variations on a theme
  JOURNAL   Curr Opin Microbiol 12 (2), 129-137 (2009)
   PUBMED   19269243
REFERENCE   2  (residues 1 to 153)
  AUTHORS   Fukami-Kobayashi,K., Tateno,Y. and Nishikawa,K.
  TITLE     Parallel evolution of ligand specificity between LacI/GalR family
            repressors and periplasmic sugar-binding proteins
  JOURNAL   Mol Biol Evol 20 (2), 267-277 (2003)
   PUBMED   12598694
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024770.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13377.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..153
                     /product="substrate-binding domain-containing protein"
     Region          <1..152
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
ORIGIN      
        1 gfigahmdnr lqrqqlngwh kamlsyyqns dlvitmpgaa slqlgryaln eillrqpeld
       61 avicsheeia lgimfecqrr llkipgniav acldgsdscd qthptltsir idykkmgtet
      121 gklligllnn nhdeseesri vqfnyqielr qst
//
LOCUS       WP_258130136             120 aa            linear   BCT 02-MAR-2025
DEFINITION  YagK/YfjJ domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_258130136
VERSION     WP_258130136.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 120)
  AUTHORS   Lin,N.T., Chang,R.Y., Lee,S.J. and Tseng,Y.H.
  TITLE     Plasmids carrying cloned fragments of RF DNA from the filamentous
            phage (phi)Lf can be integrated into the host chromosome via
            site-specific integration and homologous recombination
  JOURNAL   Mol Genet Genomics 266 (3), 425-435 (2001)
   PUBMED   11713672
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023154.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11726.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>120
                     /product="YagK/YfjJ domain-containing protein"
ORIGIN      
        1 mytesnvkls cnalwqkcvl atlyraaath peikllqfkl ipgqginkai pslmadftge
       61 lhrliseylq ckrrkdksve ptplyylwsr eavandttpy lmvlllnndv wcksrevvvl
//
LOCUS       WP_258130143             175 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein, partial [Escherichia coli].
ACCESSION   WP_258130143
VERSION     WP_258130143.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 175)
  AUTHORS   Wang,J., Hofnung,M. and Charbit,A.
  TITLE     The C-terminal portion of the tail fiber protein of bacteriophage
            lambda is responsible for binding to LamB, its receptor at the
            surface of Escherichia coli K-12
  JOURNAL   J Bacteriol 182 (2), 508-512 (2000)
   PUBMED   10629200
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024939.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13550.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>175
                     /product="phage tail protein"
     Region          <1..>169
                     /region_name="COG4733"
                     /note="Phage-related protein, tail protein J [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443767"
ORIGIN      
        1 wpytnsdvvv ddngvgfrys fsalkdrhta vevnytdpqn gwqtstelve dpdailrygr
       61 nllkmdafgc tsrgqahrag lwviktelle tqtvdftlgs qglrhtpgdi ieicdndyag
      121 tltggrilsi daasrtltld revilpeagt stvnlingsg kpvrvditah papdr
//
LOCUS       WP_258130158             152 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein, partial [Escherichia coli].
ACCESSION   WP_258130158
VERSION     WP_258130158.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 152)
  AUTHORS   Wang,J., Hofnung,M. and Charbit,A.
  TITLE     The C-terminal portion of the tail fiber protein of bacteriophage
            lambda is responsible for binding to LamB, its receptor at the
            surface of Escherichia coli K-12
  JOURNAL   J Bacteriol 182 (2), 508-512 (2000)
   PUBMED   10629200
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024939.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13550.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>152
                     /product="phage tail protein"
     Region          <4..>152
                     /region_name="COG4733"
                     /note="Phage-related protein, tail protein J [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443767"
ORIGIN      
        1 sdkvwtynrs nvvmpddgap frysfsalkd rhnavevnwi dpnngwetat elvedtqaia
       61 rygrnvtkmd afgctsrgqa hraglwlikt elletqtvdf svgaeglrhv pgdvieicdd
      121 dyagisiggr vlavnsqtrt ltldreitlp ss
//
LOCUS       WP_258130237             609 aa            linear   BCT 02-MAR-2025
DEFINITION  AAA family ATPase [Achromobacter anxifer].
ACCESSION   WP_258130237
VERSION     WP_258130237.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 609)
  AUTHORS   Neuwald,A.F., Aravind,L., Spouge,J.L. and Koonin,E.V.
  TITLE     AAA+: A class of chaperone-like ATPases associated with the
            assembly, operation, and disassembly of protein complexes
  JOURNAL   Genome Res 9 (1), 27-43 (1999)
   PUBMED   9927482
REFERENCE   2  (residues 1 to 609)
  AUTHORS   Confalonieri,F. and Duguet,M.
  TITLE     A 200-amino acid ATPase module in search of a basic function
  JOURNAL   Bioessays 17 (7), 639-650 (1995)
   PUBMED   7646486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019344.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07724.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..609
                     /product="AAA family ATPase"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /calculated_mol_wt=66325
     Region          <286..595
                     /region_name="ClpA"
                     /note="ATP-dependent Clp protease, ATP-binding subunit
                     ClpA [Posttranslational modification, protein turnover,
                     chaperones]; COG0542"
                     /db_xref="CDD:440308"
ORIGIN      
        1 msvyvkprwl rdtlrflplk sqfvlsgnvr dlqacevapg lvaaqplvst ladnlreagy
       61 aqlvvwnpvt gftvpdsrea paeppdetlr rlgltpadga apggmdalta clerlvalag
      121 ppvaliidfa srlavrsetl saaehalftr alvlahsaaa rpagesrrpf fntviwivdk
      181 egdlpdwlli enprirhvpv skpdsaarra lagallrgvp gardatpeal aeaesafvdg
      241 segllladmn aiatlarved vpitniadav rrykvgvted pwlridrdki rnadsfirrr
      301 vkgqthavth mldlvkramt gvgtqrkgnr prgvaflagp tgvgktelak tvtsllfgde
      361 sayirfdmse fsaehadqrl igappgyvgy dvggeltnai rerpfsvvlf deiekahpri
      421 ldkflqildd gvltsgrgdr vyfsealivf tsnlgiyrqd etgqrvanvh pgdsfediqq
      481 nvlgeiqrhf klvlnrpeil nrigeniivf dfirkdvate ifeqmvnsil adiaalgitv
      541 elaeaskaal qqrcigdlsn ggrgirnqle ahllnplarg lfdqdaqsgd rylisgldae
      601 afqlekrgp
//
LOCUS       WP_258130274              79 aa            linear   BCT 02-MAR-2025
DEFINITION  Arm DNA-binding domain-containing protein [Achromobacter anxifer].
ACCESSION   WP_258130274
VERSION     WP_258130274.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023589.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12167.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..79
                     /product="Arm DNA-binding domain-containing protein"
                     /calculated_mol_wt=8501
     Region          6..67
                     /region_name="Arm-DNA-bind_2"
                     /note="Arm DNA-binding domain; pfam12167"
                     /db_xref="CDD:432377"
ORIGIN      
        1 mrqgfdgvrp asessieigf fhegrhcver irakptaanl kraadrraai leaiargefd
       61 ydaefpkrgg atkpsqgsa
//
LOCUS       WP_258130289             546 aa            linear   BCT 02-MAR-2025
DEFINITION  AMP-binding protein [Achromobacter anxifer].
ACCESSION   WP_258130289
VERSION     WP_258130289.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 546)
  AUTHORS   Conti,E., Franks,N.P. and Brick,P.
  TITLE     Crystal structure of firefly luciferase throws light on a
            superfamily of adenylate-forming enzymes
  JOURNAL   Structure 4 (3), 287-298 (1996)
   PUBMED   8805533
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012711.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00501.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..546
                     /product="AMP-binding protein"
                     /calculated_mol_wt=59202
     Region          68..543
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(208,211..216,218..219)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(211,325..326,347..352,427,439,442,453,536)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(211,252..253,300,302..303,306,325..326,347..352,427,
                     439,442,450..453,517)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(252,302..303,306,325,450..452,511,517)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
ORIGIN      
        1 measahidtf ardnlppgeq wpeflldgpd vaypkrfnca veladamver ghgervalrw
       61 sqdgkpatmt yrelaalsnr iarvlsedmg lvpgnrlllr gpnnpmmaas wlaaikaglv
      121 tvptmpllra kelkqiidka qiqavlcdir lkdevefcaq athehhcpgl tkimyfndta
      181 paaldalaaa kpddyqacdt aaddvcliaf tsgttgapkg cmhfhrdvla mcdlfpkhvi
      241 kpgpddifcg tpplaftfgl ggllcfplrv gastvlaekl spesllqliq dfrativfta
      301 ptfyrqmaal vdkfdlsslk ksvsagealp datrqlwkqa sgiemidgig gtemihvfvs
      361 sppesvraga igrvvpgyva qivdddmnpv pngtvgrlai kgptgcryla derqlrfvqk
      421 gwnlpgdtfl qdddgylfyq arnddmivsa gyniagpeve dallrheava ecgvvgaadd
      481 ergqvvkafv vlkpgyqagg elvaalqqfv kaniapykyp raiefvdalp rtetgklqrf
      541 alrkma
//
LOCUS       WP_258130382           11235 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4347 domain-containing protein [Achromobacter anxifer].
ACCESSION   WP_258130382
VERSION     WP_258130382.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025611.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14252.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..11235
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..11235
                     /product="DUF4347 domain-containing protein"
                     /calculated_mol_wt=1132681
     Region          28..51
                     /region_name="LEPR-8K"
                     /note="LEPR-XLL family repeat protein signature domain;
                     NF012209"
                     /db_xref="CDD:333738"
     Region          157..343
                     /region_name="DUF4347"
                     /note="Domain of unknown function (DUF4347); pfam14252"
                     /db_xref="CDD:433811"
     Region          <283..1557
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          1653..3241
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          2920..4554
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          3738..5437
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          5280..7023
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          8915..10571
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          10548..10794
                     /region_name="COG2931"
                     /note="Ca2+-binding protein, RTX toxin-related [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:442175"
     Region          10681..10716
                     /region_name="HemolysinCabind"
                     /note="RTX calcium-binding nonapeptide repeat (4 copies);
                     pfam00353"
                     /db_xref="CDD:459777"
ORIGIN      
        1 msmkklarkl wtgrssrevq qslfrrrplf ealerrylms aellvppppp aseqapvvap
       61 adpaagaqgk kpsapgshpy lveraafkav tqhsemltle qyakasatrq gdakawlpgq
      121 eagqktgqna gqgrpsalpd aipgytthse qtpvrqiifv dpavdnaeqi vqglyglisg
      181 ktegldglak ptgdgpqlqv lrshdteiiv ldgrydgvdq itqvlgqhkd laavqimshg
      241 svgsltlgta tlgsgqlday kdqlrawgda msedgdilly gcnvaagrgg iafvdslaai
      301 tradvaaath tvgsaalggd wvldyrhgvi dantvtvasw ngvmasasgl qsggstlvgv
      361 aandqlvgyg snntfvfnns staavttiev rqgmklengv wvrnedddns nntldfsgiq
      421 gnvtaiisnn dayqitystv dagnnwtqhv vnvvfksadg sqslkigdkt fnligtaqsg
      481 ktildysgya tgvtvdlsgp tadsngeeip pppptgfgyv raisgvkgst qggnritvvg
      541 dttvtinssq diikgsgggn tyiaasgtfg fnltqqagqs gntldlsqfg advtarvqtg
      601 gglsvymgag vaadgsvnsl ttalvsnldv qmffgvagkt tldysayedn vtvnlnfqdg
      661 ntglynasgm agvlnisnvi gaggeygndi vgslgdniit vansrgqnri sggggndlvi
      721 gnlatggate yiagvessaa lsgdktsatl tntpagagaa stvtlrgvna vtlqdyrtid
      781 aaaaagstnh aatsvtldgt nyrgdltlig saganvllgg mghnvftgyq ganqlwaqag
      841 slsntleeng qwnytltngq lsaayasdgt plgtgvpvpt lantlhgafs darlngglgs
      901 tlidasafsg ntvlvsglma ggvirsgsgd ntrhqimllg grygvyggtg anattelvva
      961 adgltgtdga aykaqldasg gvgyvsfqqt ggtagwikrs sqetqatast yagitsvrvv
     1021 ageygnwidt srfagtavld gaaglsnyfi isnayatqvi gsagantvel stggksvald
     1081 nsqvkigsgg aqissaftnv kdfrfvvegs gantvdttaf tgvttrtyls dlssgytpae
     1141 gpalafvfpn hanarvdvgl egvrtiqdll daigagimin aageplriav ggpnagklip
     1201 atdttsawdy lyaltaslda qgrlqvsysq daiaagfsgm fslapgmqta lnadgtvsts
     1261 tvslsdaayk lgliaagqvq sssngagvlt gaalaighqt qfvlagsnst irsgggdntf
     1321 vvnygqgaln tgagnsiaaq vgarnslvvn tslgavlsnt avhyvsggsp asqvalngsa
     1381 fadatvists stgattldas vwnqavtlat rggydtlkgn tsnvsfvvtq padtaagkvt
     1441 vslasnsgsg nslqvmalgd gtalsrlisq tgaiagvtlg antgkldyvl digkgtldqa
     1501 lsvggrnvii rgesytvlqn itldagytlr legqnitvga tsganimlaa gaielaaqry
     1561 rpwrsamaqi yeldagitvn natlwardqq gsgvsltski dskdydldpl ikngenqstv
     1621 lnslasgvns afdalmkfld gasamaswag ikytssitvg tqarlvsnge vtitsttsat
     1681 vklsplvaki agiavgvlqn kstidvqgtv iaskaitiks dltnemeial lpgqlgavpa
     1741 vigvgvavvi sessvhigtg arletgllht adaytssvsg vggdvtiqal tshkstisis
     1801 aagamaesdd tkpvtgadgk idpsketgky kasyakvgva vgfaynqltt eafmdgtvva
     1861 rnagkvtvea kaedagsaia vktilggraa tgsdflssaq teaksaaigk tvtpivggal
     1921 sglgtgaqyt ksffsalvse nrgtkfgeki kqikqekdfe drakydsdiq keidkpstef
     1981 qvgaalgmsm snitttarig ngvtaatvst aggdvtvnaq tqyntkltvm sgvddqaiad
     2041 kqaflnkknn lttnqperaa gpdgsdfgaa aaviigidnv atqatvsqla nistqggdva
     2101 vtastlnqid pkklwlvnly apfdgidtkw ndadgtkdkm tvagkaaasf lnnlqatlts
     2161 tggisssfss wasatakskk lalsgaftvl vqdtktqaqv agkinttlsg gaagdvkvea
     2221 enssqrlnlv gniilpsmsl ggakslqkaa prgasegrfs ygkdlvkgfl tpkfqgfdyg
     2281 ssskegsaig vsvyvnaath qtravvsdta einsgkltvd adnelisvtl gasggqaktl
     2341 alngvvlvns tsattlaqvg rganitaaga asiqatdatw vgtvagaaag sqavgvgmsv
     2401 sindvnrwtq aligdtlraa dgaptarpvg sfsaasltlr aenkgfignl avagsrvssp
     2461 vagagsgtga gaggaggagg tgtsldnlkl ptsqgdaapg adspapaptd lgskleglsg
     2521 qvtqltqdtg aapgspapgg gsgsqqskag vaisgavavn mvsdfaqayv naagmkitig
     2581 gdakveaqng thtlalsgsa alaqsdnaks nvgiagaysm nmlggearaq vlavgelvva
     2641 adlalaarrt gvavtiaagm agakgqkgva vagsaavgva dyaniavlgn aakvsardvt
     2701 leardlsvlv tvagavasse gkagvgaava vnvstsnaea girqvtelly tgrvdvsaqs
     2761 tqvavgfaga lgaardgagv ggsvsvnvls nrinsyvvns kvvyggaags nhgvdiraed
     2821 kstlvaitga agvgkkagvg iavsyneign vvmagiqgst vdtgghgavn vtakdtsslg
     2881 ggavgvgvgm geakfaaags vqvnrvssav aayvlpsrdg ngavtarsri dasaltveat
     2941 enntlvavtg gvavtaggsv avgasvsvne fssrtsalle yadvdvagkv dvsahsspll
     3001 vsvgaagals kkfalagavn vnmmrgatea risdstvkag sqagfsgdav rvnasdasal
     3061 yaitvagaia tqgaavglav avnimggnta fdrnllgfnn ttladsgaav ttvgvadnag
     3121 atanpkiaas ilrsdvraaq gninvfaglv dpmaaggnaq lnggnqlpvg dggigvnqgg
     3181 stltftgdaa aiingtkdds gnagmpgqsg asgeefsgwq tgdgvylssg agnitladgs
     3241 slrndrvyyv irreapdgqa iiqladtqed alrgkalqfg svvnlsaigf ahvrmqeats
     3301 vnlqpfhgvd agvtlntatn tlvlaqpfpg vqegsaiiys gsvggngqie dvlanrilaq
     3361 gkdvlkvgvt yyvfnlsadq tsfqlrdgqg nvvdfsgaav ggalqrfsvs npagaalnpd
     3421 gsltlpkahg latgdkvvvn laangiltgl andhvyvvev vnsttlrfkd vngaavtlga
     3481 lgyvaefnag skrydyflad angvklldaq nrpisvnpda miaftqvalq rqtsqtstst
     3541 gsdgtqntsi tqgtptnatl sassaksqva gensfsfasd aglatgdvvi yrsqgtniag
     3601 lvdgqryyvi nasqggafry qlasslenar dgiamqlgal tgtggislqk avdrissggl
     3661 itldigsltk gqslsnsmls itvagaggks lggagaigvn lsradvtaii dntgaaagtk
     3721 vqadtgavsv saqdasrivt atgalgistt qgasaaigas vgvadmrnsv raaiaqatve
     3781 aqavqvraee rasiynvsvg laggagvavs gslavntiqn tvhaqirdas vtatsgdiri
     3841 vardtasiaa lagnvavsvg grvaagmafa vnqifdtvya gavrsslsat gdivvqaafa
     3901 kpddlspgln aqistmavsg avaaggsgan vgfggsavln wiansikaei getsagqdvt
     3961 aggdivvras destinslag avalglgsqg asvavgasls ynylggapag narehsisaq
     4021 irdtqgavrg ahvqvaslfe gsihnvtvag svavgtaavs vggavsvnrl nskneagirn
     4081 arlvealsag gapgvavqar ddgyvlavag glgvavspgs gagiaagvsa thntvnnqtr
     4141 ayidgssasn sglntaigsa hgiavdavne srivsvsigv aaavavgqgf agagagagsg
     4201 ntiggsveat lknviplnng yiagdvrvna entgsivtva galavavsag gmgagasvgv
     4261 svaiseistt vralvensvi wtngtgqgvt vsasdratit aiavggavsv qagsagvaia
     4321 vgtsvavnkv fntvhadirg gdiqtagagl svsanqqagi lsvvlgasva vsvgdsanaa
     4381 iggggalarn visasvqagi sdahistega ggargaldvr alglsqinav vlgmsasvsv
     4441 shyaaasasv gvamaenvig ydvnsagqvv alganrpvne itasidrsav tagavsvnas
     4501 nvkfkadgsv dqqqsidavv vagavavsva yappivdgas lavsgagaga ravnkiktai
     4561 taritdqnqa hawnaasvsv vatdksrids tiaavaisva vslgatasls vaaslaqnev
     4621 gndtlakvdg vnftgapvit vkadsqasih tvsvavsiaa gvslgglsva gggadarnvi
     4681 sssavammng srvtgngana ltidadmsgt idakvvvasv aftaaggsla igaslaenei
     4741 tqaagarasl sntqiwhlga vnvsadtrqt leavvvagav giayqgaala gagssaynts
     4801 ravtraevng ltqsdatvrg aeslnvrasn tstlkataag aslagtsqgl alsvgvalas
     4861 nkalgaveaa lsnsvltasa gaqmtrvavt aqdtttleak aigaslafam qggslsvgas
     4921 varnvaamsv qssitgstln vsdgvavsak etatldgvsv aasvaagfag vavsgagaes
     4981 tqtvandvgg yisgstitag tgvsvkadnt ssisavtgav svsvtgaglg asigvsiakn
     5041 tfgaysgdgv tranralayi dnstisvakg nvdvlatsse tltsvnfags vaaagaggsa
     5101 agsgvqvtnr fatttsayiq gseaiagitg gagsvnvraq dastilksga ygvavaaslp
     5161 vpgnfglnla lavtlvdsea anevsayint asgknvgayd avsvtalekt dfkgldavta
     5221 svavgggiaa sgagvrvtnn trnnvsaris gagkvgalgk veikadtqvr aeidltqvsv
     5281 avgivgaavg vgiaeniard tttasvdgat vsapvvdmna lvsvdfsqtq tagvaattgl
     5341 avnvnkalvd iatttlaear ngavlqgvsv svpgqgeipg mvninaqgty ygrayskait
     5401 ggvigvgvms aetrlggslk asvdnatvqg aiigittaat terngeaglq aearslevgg
     5461 vtvsidsakl ttaldsrvqi gnnarvdgtl lsivagqvqs vdvkmdagti alvagrqgki
     5521 dvevggksai disggaqvtg nkldirsnnt vrgtstlsgy svkvagadvs khtvtikpes
     5581 tititgarqa nstlesagmt vvqargnfdt pgmldlvttn diiytqrnki tgvsgvsvtl
     5641 stnklstdga lsqvkvsgaf lrnafgdvvm aantrgvttt isdllvvavs sfsksdsnnd
     5701 ltvrnailid nssiegdsil alagsgkasd plstgyllan dnvsftlvgi aqipdvdsga
     5761 karqintvli dgvssigsll kaqrnvrlet npskldqahv ngsvqvigln lnptvklada
     5821 vvdttssrva tgsatqiiag vnnaanlfvi paellaqlgl svaglptaga plrfdsnspv
     5881 vkailekllg agktsldgap gtvnidvrye ltafsasdik vnvtagmiie hngsyyryns
     5941 pnsrdldlaa edyvnnsywm rlsnptqaqk dealgsdfga faagnvgrly fvlktvdidq
     6001 ptlryasqqn viseqirtlt rmqvehasdp qavaryqani aalqqqlqsi qmgmtlangq
     6061 iryldsfstf fidmpdmyas ggsvyvsasd tsgvyrsgid arantqiniv ndspmlmnvr
     6121 davvldgtii rpgsdgqlkv fktghlyind vsvkgasgad taevsisqlk ngwaadpfgg
     6181 alndpsdpnn svakmianap vdlslmgavv nplgkvsvin algsinvsgt iqalsldiva
     6241 kgnfslqseg wynsgadptf lndkwqsvin alknggtstg iddtmqnvll kwgynnqlgs
     6301 ftnylngnaa ardsriftlg aisisaltln idgkiqsglt dayikidssf rgdqdkalqd
     6361 gngyaiggvs fsadgslnry gaitgrfdya tqtiildpir laggsisltg qivsvgngnl
     6421 ivangyasvh idnqttyalv thdidvstyr rgrieiidta rgqkdlyelq glndvvhtvw
     6481 nkfvqpssas tdplaldriw vyensagqqd aaglrnsagt lqdgrtltlt ykpqagqmmv
     6541 wvmgwtsget tttvytskrf nlfgdwdplg wltnndttks gpvtvyetpr pvlvstvvay
     6601 dgvnsvpdal rqqlaasgkl nqallpttie gsgtqrlved asgdivgpdg khyrlessgg
     6661 taldtstfsv ayrkfntgvi vrndgphtsg ggwlrtkttt ltqvvekkqq elftfyvpas
     6721 qeitlsflgs snsdnaiyir sngnvtlagn livgngktvh ieavsasspt sitmqgevgi
     6781 mardpngqmp tgasavvnvd aialggsisl nvmgsngytr aearndirln yfsdggnssw
     6841 atlkkvasaa gtvyiealng ifahasagnd tvvtgnriel nagygaigta skaltiyarq
     6901 gfaaqaglag gpagadksiy laqnvlnadl tlvkpvnwsn pqaavyaalg svhislnggs
     6961 lldgeladtr tatekayptv taklladlsa qlsqydsyws gvrslqtatv tlggsgtyls
     7021 tqaeggqyla igmtaaqyaa alqaavdghh lvrlaynnsl ngnarteilg ylglvagsga
     7081 ngvyqftftl ydpsnpnagp vslaslgyta gsqgvlygps yalagatdqs nanlpitftl
     7141 psgnlttqqg sdtlrlqlsa dqiaafyakg dpaigdyyqr vlaglrsynt ilvggqvlai
     7201 dqilptgqww gsnsfdtili rlkspyvgdl tptdgnghre lnvvlsngsq tagagsytgs
     7261 tdtarpqvps sgtsaatlpq gdqdittsiv naitqynlah pqakidtgpg slyanltats
     7321 psnpwsvver ssssnsllls gsqlgwgmps giytvqgynq wmnqavngli gseisftidg
     7381 vsytrriesl slvradgspa lnlndsqnyv svtfsgaave iknyyvrnga gtvvsnqlps
     7441 elaygltglg kgsgsgsatl amaytvqrgf gatalkqgtl ssdtptsywg wygsnllpfy
     7501 tytektgtga gyveyvdmgn sfswdltgss lsdsartqla nsikallqsg qsislaglel
     7561 ymtnqngtlq ghelgvydng tlhiltivda qgnpltaass dsdwltgrit fsgkvyaqks
     7621 qledldvykn tnvhdpaats gyvpnlqgkt vnagirlvdt gfaqqsltqf gaatltlpgt
     7681 drlvqgqrve lsfsnsnqtv iyyvqsvngr vvtlsdsvdg afnggtpvsv gailalagns
     7741 pgavtvrlld aaasgasvla dnvitltdmn ivpvtdangq itgyralqnf drvylndvrl
     7801 qtgkvsslqt nvayyvlvga nntiqlfask eqamlyqqiq vlnqtpagqa lvkalftdag
     7861 itgellrgfa atdvrgmftv sthlfqtqaa gsteglsaqm lalheqlrnq gfdpnylpaa
     7921 ldiaaaqnlv kstrnqvvyd yvvekelaqt aeyhnywrer lestagtavs glvsvgsgsf
     7981 kladmnivdd gtgqlralrt gdeiyfrnav gnvradtayy aivgadgtir laasladaml
     8041 yqtgagqndg llalypnmgq pitlmfdass lngadvqayt rvytvradat aqtaeeialy
     8101 gqtydaghff yfsnatlrni ennllypvsa ainekvfdle gngesarpvd rflnvkaggd
     8161 ielrtsgqgs igaqlgdytl qlpnldglsd aeranvfdsl peadkailsr anavnlagvy
     8221 htlyryigpa gttpldrsqv dfsdtslwqr feplfsndas lllgrtlaad savqflfadr
     8281 fdlyqnsrqv fiynskmleg attaqrsqlq anidaarang vqvvdigsgf ldpvwsqisv
     8341 pymaqdgasp qalsagmlvg dmrdpryltl kltrslavqa vdgvvsaysd ttvgldspqg
     8401 sirlgdihak qgititvgaq ggsiigtdag tlesagqvsl vadkdivgst rdangiyqyd
     8461 askhlqlnls aghslyveag gvarvaqsga qdlnlvlaht kgtaaggssy qaganllvgq
     8521 vvsagsvtlq agqsilnata egqrqyanvv lsdlsasela algyvrevvl iagksvgqlg
     8581 aelsqqgspl lisisqgdtq alvrasages vnlygmhglr lgginvadan gnrgdariya
     8641 ldsilngtas gqaaitarnv wletlsgtig elgsplltdm sgylvasasg svslsqlgah
     8701 dlalsrvesr srdevhlsse asivndktah pggsssrsga vvtggslyft avgsvggyaq
     8761 sdtagaqand alivaavgpq atinalaggd valvqlgaat daqgasqals mnigrieann
     8821 awlvarheag qsapsgdivl spdsvistvg vlsllagnnl svagrnglap galtqagqrm
     8881 nlrvdrddrg tagygktsvm dingrllapq ihvygsqtgd naisfgsnae igggldgngg
     8941 ltqgalldit ggsgqdritv rallinqqqt yvrtldgddt vtfdssdlrg nlsvqtgqgd
     9001 davsvldtri sgdlavaage gvntvlldaa aiggdtsits gagadqitlr nssltgsltv
     9061 tagdggntvl leavnvggna alttgagadr itlrdsgvtg alsvdagdgd ntilldtvtv
     9121 ggnaaittgv gidlitlldt dlagtltvda gdgdnavlle rvtvglatgi rtgsgtdrit
     9181 lrnsglggal tvvagdgdnt vlldtvnvgg ntaittgaga dqitlldtgl agtltvdagd
     9241 ggnvvllerv ttglatsirt glgadrvtlr dsnlsgmlav dagtgdntvl ldtvtvggdt
     9301 aitagagidq itlrnsgltg sltvdagngd ntvlldtvtv ggdtaittga gidqitllns
     9361 sltgsltvda gngdntvlld tvtvggdtai tagagvdlvt lrdsgltgsl avdagdddns
     9421 vlldtvtvgg ntaittgsgv dlitllnagl sglltveagd gdnivlldtv tvggnaaitt
     9481 gagldlitll nsglkgslav dagggdntvl lstvtvggnt aittgsgids itlldsgltg
     9541 sltvdagdgn ntvllntvtv grnttittgs gidsitllds gltgsltvda gdgnntvlln
     9601 tvtvggntti ttgsgidsit lqdsgltgsl tvdagngdnt vlldtvtvgg nttittgssi
     9661 dsitlldsgl tgsltvdagn gdntvllntv tvggntaitt gsgidsitll dsgltgsltv
     9721 dagngdntvl lntvtvggnt tittgsgsds itlldsgltg sltvaagdgg nailldtvav
     9781 sgntsittgk dadritlrds rlagalavna gdgdnavlld tvtvgggtvi vtgsgadlim
     9841 lsdsdflghl svdsgagddk iwmsrillar gaavqagegd dyiylsaral aggislrgdg
     9901 gndlivldel psltsqqgtp gvtdrvevdg grgsnhvvvn lnealtsili nvhnsdgmga
     9961 enlagvnqlt ingtvqdesf lvranyvaki tpqgagyada vqrvnydrss tgglrlnavd
    10021 ggnrfyiddt styvvidggl gsdaskhney qvgqlyaldr llpqvaagdq idtvlttqgy
    10081 lsrgnsyglt lygaqnssnv frvysnaapl alhggsrdde fmvyafkqaq pqangergyv
    10141 ingpvsidgg dglntytmlg sedddafvlt qegirgagln tsyqniqrvn ldaregndhi
    10201 yvlstrsnvi ttliggsgsn tfdlsgdvag ntivsgrggs rdvfdgaqpv sitaqpgeld
    10261 ahggntlsls vsldagvlpr pasgqayvsl ssamvasaly gslsqgagls sadalaaamq
    10321 slqgrgvlls tdggqswhqs vvlafdanga gaqawgatqq vlikvedgag vglpplslag
    10381 rdlhlsaslf ttlpglqdva lppilvrvad payagpanep gkvrnprasd qpvitvdpat
    10441 gisyanygdq phdvsgiqgs llieggtldr pgydgvlhag vglpgetdga lgarhegaaq
    10501 tapannriri fddgttvgqt gmqdqvdnls glgrlydnaq aadfgritgl gmtpglggag
    10561 gtvsqtgkeg thvydrgivf hgvqsvntml gqgddtytvr hatigtmtlv qggggnnlla
    10621 aegstvggae rpvllfgsts qddayytagp gqrqagqals fgkagnnvld artttqgvil
    10681 yggagndliy ggsgndliag gggnnvihag qgnnivfgna gmnvdlgasm dmgaaaradl
    10741 rtlaaltlvl tpeqaaglav grsadllaag gntitagdgn nivfanfgri vtvdpvnylr
    10801 drgdfidaaa pggearylag dglrmletin lpaggvntit vgagrnalfg gmgddiirae
    10861 gaggfnliag dgararytda griavfesiy psvggndsly nngegvmlgg mgadqlesga
    10921 gnnvmfgdng rvafvndris lieaidiafg gddillagtg gnymlgglga dkfrgnfskd
    10981 vmvgdfaaiy idpvsgrvin ltrfgqggnt pdlitramen lyswsgnfgd wprpafgalv
    11041 srwgadnrqe aegraaadrv rlgvarpdiv idrhdgglsd yassapadav smrtdqtvqd
    11101 ggqgypggaq paaatqapaa kapsadpadd aasqdaapta taapqdarah vesdagsglq
    11161 sdaapaatga saaeraalaa gvgllglsga lgasgngtvv fnsktntwet kaarkrglsv
    11221 rrqepeltei gsede
//
LOCUS       WP_258130400             200 aa            linear   BCT 02-MAR-2025
DEFINITION  LysE/ArgO family amino acid transporter [Achromobacter anxifer].
ACCESSION   WP_258130400
VERSION     WP_258130400.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 200)
  AUTHORS   Vrljic,M., Garg,J., Bellmann,A., Wachi,S., Freudl,R., Malecki,M.J.,
            Sahm,H., Kozina,V.J., Eggeling,L., Saier,M.H. Jr., Eggeling,L. and
            Saier,M.H. Jr.
  TITLE     The LysE superfamily: topology of the lysine exporter LysE of
            Corynebacterium glutamicum, a paradyme for a novel superfamily of
            transmembrane solute translocators
  JOURNAL   J Mol Microbiol Biotechnol 1 (2), 327-336 (1999)
   PUBMED   10943564
REFERENCE   2  (residues 1 to 200)
  AUTHORS   Zakataeva,N.P., Aleshin,V.V., Tokmakova,I.L., Troshin,P.V. and
            Livshits,V.A.
  TITLE     The novel transmembrane Escherichia coli proteins involved in the
            amino acid efflux
  JOURNAL   FEBS Lett 452 (3), 228-232 (1999)
   PUBMED   10386596
REFERENCE   3  (residues 1 to 200)
  AUTHORS   Aleshin,V.V., Zakataeva,N.P. and Livshits,V.A.
  TITLE     A new family of amino-acid-efflux proteins
  JOURNAL   Trends Biochem Sci 24 (4), 133-135 (1999)
   PUBMED   10322417
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10003422
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..200
                     /product="LysE/ArgO family amino acid transporter"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_function="GO:0015171 - amino acid transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_process="GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /calculated_mol_wt=20981
     Region          1..200
                     /region_name="ArgO"
                     /note="Arginine exporter protein ArgO [Amino acid
                     transport and metabolism]; COG1279"
                     /db_xref="CDD:440890"
ORIGIN      
        1 mttaylpgfl lglslimaig aqnafvlrqg lrqehvfvvc lacalsdail isagvagfgl
       61 avgalpwlep alryggalfl fayaarslrs alrarhdslt psstkaagry aalatclalt
      121 wlnphvyldt vvllgsvssq ydghktafal gaisasfvff falgygarll rpvfanpnaw
      181 rvldgcvaaa mfaiglklvl
//
LOCUS       WP_258129359             199 aa            linear   BCT 02-MAR-2025
DEFINITION  polymorphic toxin type 25 domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_258129359
VERSION     WP_258129359.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 199)
  AUTHORS   Cuthbert,B.J., Hayes,C.S. and Goulding,C.W.
  TITLE     Functional and Structural Diversity of Bacterial Contact-Dependent
            Growth Inhibition Effectors
  JOURNAL   Front Mol Biosci 9, 866854 (2022)
   PUBMED   35558562
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 199)
  AUTHORS   Waneskog,M., Halvorsen,T., Filek,K., Xu,F., Hammarlof,D.L.,
            Hayes,C.S., Braaten,B.A., Low,D.A., Poole,S.J. and Koskiniemi,S.
  TITLE     Escherichia coli EC93 deploys two plasmid-encoded class I
            contact-dependent growth inhibition systems for antagonistic
            bacterial interactions
  JOURNAL   Microb Genom 7 (3) (2021)
   PUBMED   33646095
REFERENCE   3  (residues 1 to 199)
  AUTHORS   Zhang,D., de Souza,R.F., Anantharaman,V., Iyer,L.M. and Aravind,L.
  TITLE     Polymorphic toxin systems: Comprehensive characterization of
            trafficking modes, processing, mechanisms of action, immunity and
            ecology using comparative genomics
  JOURNAL   Biol Direct 7, 18 (2012)
   PUBMED   22731697
  REMARK    Publication Status: Online-Only
REFERENCE   4  (residues 1 to 199)
  AUTHORS   Aoki,S.K., Diner,E.J., de Roodenbeke,C.T., Burgess,B.R.,
            Poole,S.J., Braaten,B.A., Jones,A.M., Webb,J.S., Hayes,C.S.,
            Cotter,P.A. and Low,D.A.
  TITLE     A widespread family of polymorphic contact-dependent toxin delivery
            systems in bacteria
  JOURNAL   Nature 468 (7322), 439-442 (2010)
   PUBMED   21085179
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF026868.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF15530.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..199
                     /product="polymorphic toxin type 25 domain-containing
                     protein"
     Region          <1..29
                     /region_name="PT-VENN"
                     /note="Pre-toxin domain with VENN motif; pfam04829"
                     /db_xref="CDD:428147"
     Region          32..199
                     /region_name="Ntox25"
                     /note="Bacterial toxin 25; pfam15530"
                     /db_xref="CDD:373925"
ORIGIN      
        1 agglvgdsga savagaqsgk ttvennalse lvpprvqqdt slaidlgqkg qgygeinnai
       61 dashlgpswg teykvktngk ievsggigpa lkgemkvnnd yfsvstgytk efgakagasi
      121 gidfgpydfg vfgdlnrdys tsigygpgsv glsvgqdglg fsfsvgpsig ftgsstvphs
      181 ekiemngdtt keiyhydfk
//
LOCUS       WP_258130430             302 aa            linear   BCT 02-MAR-2025
DEFINITION  arginase family protein [Achromobacter anxifer].
ACCESSION   WP_258130430
VERSION     WP_258130430.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012703.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00491.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..302
                     /product="arginase family protein"
                     /GO_function="GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /calculated_mol_wt=32016
     Region          17..286
                     /region_name="Arginase_HDAC"
                     /note="Arginase-like and histone-like hydrolases; cl17011"
                     /db_xref="CDD:450134"
     Site            order(109,132,134,136,219,221,263)
                     /site_type="active"
                     /db_xref="CDD:212513"
     Site            order(132,134,221)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:212513"
ORIGIN      
        1 mglpavraag tgaaracvvg ipfdcgthpf rvgsrqgpda ireqsrllrp vdifrrhgid
       61 nppeflraid vgnvachpgd pdasypliea gigaildaga ipismggdga vtlpqlrava
      121 rrhpdfvvlh fdshtdtypi pgyntattft raaeeglldv assfhvgtrg ssfmpgvlef
      181 grevgytivp yddfdqdqkg aladikqrig qrpvylcfdm difdpscapg vctpewgglt
      241 pkeglallrq laglnfvafd vntvsppqdv qgataflaat vmqefcalaa vavqqypqgr
      301 pa
//
LOCUS       WP_258130437             252 aa            linear   BCT 02-MAR-2025
DEFINITION  SIMPL domain-containing protein [Achromobacter anxifer].
ACCESSION   WP_258130437
VERSION     WP_258130437.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 252)
  AUTHORS   Vig,E., Green,M., Liu,Y., Yu,K.Y., Kwon,H.J., Tian,J., Goebl,M.G.
            and Harrington,M.A.
  TITLE     SIMPL is a tumor necrosis factor-specific regulator of nuclear
            factor-kappaB activity
  JOURNAL   J Biol Chem 276 (11), 7859-7866 (2001)
   PUBMED   11096118
REFERENCE   2  (residues 1 to 252)
  AUTHORS   Pfeuffer,T., Goebel,W., Laubinger,J., Bachmann,M. and Kuhn,M.
  TITLE     LaXp180, a mammalian ActA-binding protein, identified with the
            yeast two-hybrid system, co-localizes with intracellular Listeria
            monocytogenes
  JOURNAL   Cell Microbiol 2 (2), 101-114 (2000)
   PUBMED   11207567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016300.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04402.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..252
                     /product="SIMPL domain-containing protein"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress.; The SIMPL domain is
                     named for its presence in mouse protein SIMPL (signalling
                     molecule that associates with mouse pelle-like kinase).
                     Bacterial member BP26, from Brucella, was shown to
                     assemble into a channel-like structure, while YggE from E.
                     coli has been associated with resistance to oxidative
                     stress.; The SIMPL domain is named for its presence in
                     mouse protein SIMPL (signalling molecule that associates
                     with mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress.; The SIMPL domain is
                     named for its presence in mouse protein SIMPL (signalling
                     molecule that associates with mouse pelle-like kinase).
                     Bacterial member BP26, from Brucella, was shown to
                     assemble into a channel-like structure, while YggE from E.
                     coli has been associated with resistance to oxidative
                     stress.; The SIMPL domain is named for its presence in
                     mouse protein SIMPL (signalling molecule that associates
                     with mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress.; The SIMPL domain is
                     named for its presence in mouse protein SIMPL (signalling
                     molecule that associates with mouse pelle-like kinase).
                     Bacterial member BP26, from Brucella, was shown to
                     assemble into a channel-like structure, while YggE from E.
                     coli has been associated with resistance to oxidative
                     stress."
                     /calculated_mol_wt=25984
     Region          8..252
                     /region_name="COG3471"
                     /note="Predicted secreted (periplasmic) protein [Function
                     unknown]"
                     /db_xref="CDD:442694"
ORIGIN      
        1 mfkhpvfslt klgaacatva alsaaplaha qaqapaaate tsasrapelt lqamassevk
       61 qdtvrislsa eveapdqpaa gkkltamldd vvkrardvkg vevrtggynv wpntsskgki
      121 gswrgqgevi leskdfeaaa alasklsdkt aisnisflls reareaeerk llkeaaqafk
      181 dralaaanaf gfsgyrlskl elggsggpvp mprmmgaaam akdasggysp dvpleagnvt
      241 vsiavngtiv lq
//
LOCUS       WP_258130500             391 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Achromobacter anxifer].
ACCESSION   WP_258130500
VERSION     WP_258130500.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..391
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=39927
     Region          3..384
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(14..15,18..19,22,58,105..106,108..110,113,136,
                     139..140,143,214,217..218,221..223,226,256,260,310..311,
                     315,319,335,338..339,342..343,346)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340913"
ORIGIN      
        1 mippraivcl gltqlvgwgv tfyligalgp amaadlgwna atvyggfsaa ivvmalvspl
       61 agravdrwgg hrvmpvgaal salgcatlsv ahavplyfla wivlgvgmrl clydaafasl
      121 araagptarr pmsqitlfgg lastvmwpvg halsewlgwr gavlayagla latlplylal
      181 prqryaakad gkdktsagla rnaaerrlag vlyaliamlt nflaagnaah lisllsglgl
      241 aaaaavsvaa lwgvgqfaar ladvalgsrl hpltltlavc vvlplcflla llsggnlyas
      301 aayallygac nglltitrgt lplalfdfrs ygalvgallv psflltaaap vayaymaash
      361 gargamalsl glatvicaaa falrckfiar c
//
LOCUS       WP_258130550             234 aa            linear   BCT 02-MAR-2025
DEFINITION  LuxR C-terminal-related transcriptional regulator [Achromobacter
            anxifer].
ACCESSION   WP_258130550
VERSION     WP_258130550.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012422.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00196.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..234
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /calculated_mol_wt=25093
     Region          16..234
                     /region_name="PRK15369"
                     /note="two component system response regulator"
                     /db_xref="CDD:185267"
ORIGIN      
        1 mtanmlapes tlpapvllve deplicrrle slllqlgyap ealvfaatla qarerlasqp
       61 falalvdlgl pdgngtdlia emhaedpgla ilvisawste dailaalrag atgyvlkerd
      121 dlevslsirs vlrggapidp fvarriieel rprrteaaga aaagetadpg eslspresqi
      181 lrlvseglgn reiaeelhls rytvechvkh iyrklavssr traihaartr glld
//
LOCUS       WP_258130557             128 aa            linear   BCT 02-MAR-2025
DEFINITION  Hpt domain-containing protein [Achromobacter anxifer].
ACCESSION   WP_258130557
VERSION     WP_258130557.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 128)
  AUTHORS   Porter,S.W., Xu,Q. and West,A.H.
  TITLE     Ssk1p response regulator binding surface on histidine-containing
            phosphotransfer protein Ypd1p
  JOURNAL   Eukaryot Cell 2 (1), 27-33 (2003)
   PUBMED   12582120
REFERENCE   2  (residues 1 to 128)
  AUTHORS   Kato,M., Mizuno,T., Shimizu,T. and Hakoshima,T.
  TITLE     Insights into multistep phosphorelay from the crystal structure of
            the C-terminal HPt domain of ArcB
  JOURNAL   Cell 88 (5), 717-723 (1997)
   PUBMED   9054511
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013767.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01627.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..128
                     /product="Hpt domain-containing protein"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /calculated_mol_wt=13904
ORIGIN      
        1 mtlslhseqe spqeqvvaal rgellfkvgn dldiaaelah slhthhkedv dalrlamqqe
       61 cwpevgryah rilntaqllg cgalvelslr veeklvrdgg pacaellagy vpvvenlsav
      121 larvsrtf
//
LOCUS       WP_258130565             508 aa            linear   BCT 02-MAR-2025
DEFINITION  sulfatase-like hydrolase/transferase [Achromobacter anxifer].
ACCESSION   WP_258130565
VERSION     WP_258130565.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 508)
  AUTHORS   Lukatela,G., Krauss,N., Theis,K., Selmer,T., Gieselmann,V., von
            Figura,K. and Saenger,W.
  TITLE     Crystal structure of human arylsulfatase A: the aldehyde function
            and the metal ion at the active site suggest a novel mechanism for
            sulfate ester hydrolysis
  JOURNAL   Biochemistry 37 (11), 3654-3664 (1998)
   PUBMED   9521684
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013080.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00884.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..508
                     /product="sulfatase-like hydrolase/transferase"
                     /GO_function="GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=56068
     Region          4..490
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
     Site            order(12,51,231,339..340)
                     /site_type="active"
                     /db_xref="CDD:293732"
     Site            order(12,51,231,340)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293732"
ORIGIN      
        1 mkrpnillit tdqhrgdclg fagrrvktph idhlartgth ftacitpnvv cqpsrasmlt
       61 gllplthgvr dngidldlrt geagfagsla aagydtgfig kahfsthhtf qatgrpecqy
      121 seagmgpawa gpymgfehve lvveghnywl ptplpgglnh srwhygdglg elrnqlyqtd
      181 lgpasgapqt fssalpaawh nsawigdrsv dylrehrdrp fclwasfpdp hhpfdcpepw
      241 srlhhpdevd lprhrvtdye rrpwwhrasm eskpmgnaev qavrqnfsrm ptqsdealrr
      301 iianyygmis lvdhqvgrim kalseygldq dtiviftsdh gewlgdhglm lkgpmpyegl
      361 lrvamvasgp givagqrved pvstldlaat fydyggvsgl apvhgrslrp llegrdasre
      421 falsewdvaa srcgvelklr tvrtrdwklt lelgsgagem ycladdpdem dnlfddpgha
      481 akrreltdml asrpadqlsa rvaasgia
//
LOCUS       WP_258130609             310 aa            linear   BCT 02-MAR-2025
DEFINITION  LysR substrate-binding domain-containing protein [Achromobacter
            anxifer].
ACCESSION   WP_258130609
VERSION     WP_258130609.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 310)
  AUTHORS   Tyrrell,R., Verschueren,K.H., Dodson,E.J., Murshudov,G.N., Addy,C.
            and Wilkinson,A.J.
  TITLE     The structure of the cofactor-binding fragment of the LysR family
            member, CysB: a familiar fold with a surprising subunit arrangement
  JOURNAL   Structure 5 (8), 1017-1032 (1997)
   PUBMED   9309218
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015431.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03466.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..310
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=33862
     Region          6..300
                     /region_name="PRK11139"
                     /note="DNA-binding transcriptional activator GcvA;
                     Provisional"
                     /db_xref="CDD:182990"
ORIGIN      
        1 mrlhspsmse lhafvtaarl gsftraaeil cvtqgavsra isrleahfgq plmhrnahgl
       61 tltetgrrly egaqapllai etlsaglrad nrrlrltlst vptlasawlv prlpdfharh
      121 pdiqlgfaay rrnedfsgat pdasilsgmp eqwpgwqvdy vigremvvic hpgrlatrra
      181 qglwdtpagl lgepllyhsn gmdnwaqwla aagvprpavq lsngfdqvsi lvravmadmg
      241 iavlqrclvh ddlqagrvaa pfpdlpvria rgyhlcspaq rrdhyalacf rqwlletagq
      301 dpdvlaanpa
//
LOCUS       WP_258130731             396 aa            linear   BCT 02-MAR-2025
DEFINITION  amine dehydrogenase large subunit [Achromobacter anxifer].
ACCESSION   WP_258130731
VERSION     WP_258130731.1
KEYWORDS    RefSeq.
SOURCE      Achromobacter anxifer
  ORGANISM  Achromobacter anxifer
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Alcaligenaceae; Achromobacter.
REFERENCE   1  (residues 1 to 396)
  AUTHORS   Chen,L., Doi,M., Durley,R.C., Chistoserdov,A.Y., Lidstrom,M.E.,
            Davidson,V.L. and Mathews,F.S.
  TITLE     Refined crystal structure of methylamine dehydrogenase from
            Paracoccus denitrificans at 1.75 A resolution
  JOURNAL   J Mol Biol 276 (1), 131-149 (1998)
   PUBMED   9514722
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018172.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06433.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Achromobacter anxifer"
                     /db_xref="taxon:1287737"
     Protein         1..396
                     /product="amine dehydrogenase large subunit"
                     /GO_component="GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /GO_function="GO:0030058 - aliphatic amine dehydrogenase
                     activity [Evidence IEA]"
                     /calculated_mol_wt=42898
     Region          51..365
                     /region_name="Me-amine-dh_H"
                     /note="Methylamine dehydrogenase heavy chain (MADH);
                     pfam06433"
                     /db_xref="CDD:399440"
ORIGIN      
        1 mnalrarsra sravrwalca alaasaglar adlpveelkg gtrlppatph rlyvmdavfn
       61 hlvdsrvniy dgdsmkflgm vpasfnghmt vsadgkdiyv mttyyerlnr gkrtdvveaw
      121 daetltpkye vpipqkraqa lnyrnylqqs tdgellfvqn atpassvtvv nlktrefade
      181 vtaaagcwsi ivlpsrprsf asicgdgalv tvdldqagkp agqqrsqpmf dpekdpifth
      241 tenlgdtyyf vsyngnvysa dfsgkdaafg kpwslldasg kdqgwrpggy nllainkaat
      301 rlyvgmhpng aegshktpaa eiwvydlath krvarvpgqn alsmsvsqdd qprlytidgg
      361 nvnvydaapa apvlkgtiqa agetalqvep qprgar
//
LOCUS       WP_258130815             197 aa            linear   BCT 02-MAR-2025
DEFINITION  phage integrase Arm DNA-binding domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_258130815
VERSION     WP_258130815.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 197)
  AUTHORS   Wojciak,J.M., Sarkar,D., Landy,A. and Clubb,R.T.
  TITLE     Arm-site binding by lambda -integrase: solution structure and
            functional characterization of its amino-terminal domain
  JOURNAL   Proc Natl Acad Sci U S A 99 (6), 3434-3439 (2002)
   PUBMED   11904406
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020572.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09003.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>197
                     /product="phage integrase Arm DNA-binding
                     domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0008907 - integrase activity [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          2..62
                     /region_name="Arm-DNA-bind_1"
                     /note="Bacteriophage lambda integrase, Arm DNA-binding
                     domain; pfam09003"
                     /db_xref="CDD:430365"
     Region          3..>194
                     /region_name="FimB"
                     /note="Integrase/recombinase, includes phage integrase
                     [Replication, recombination and repair, Mobilome:
                     prophages, transposons]; COG0582"
                     /db_xref="CDD:440347"
ORIGIN      
        1 msprprknst dvaglyekfd rrtgrvyyqy knpvtgkfhg lgtdkgkaek iastanqria
       61 aaeaeyfmrk idespsatkr rgirlkawvd rylkiqdtrl kngdiaatth kektrmaayl
      121 vsrlgnhplk elevrdfali ldewldkdmv starvnrglw vdiykeaqha gevppgwnpp
      181 eatrkpipkv trsrltl
//
LOCUS       WP_258130885             532 aa            linear   BCT 02-MAR-2025
DEFINITION  tail fiber protein, partial [Escherichia coli].
ACCESSION   WP_258130885
VERSION     WP_258130885.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 532)
  AUTHORS   Xue,Q. and Egan,J.B.
  TITLE     DNA sequence of tail fiber genes of coliphage 186 and evidence for
            a common ancestor shared by dsDNA phage fiber genes
  JOURNAL   Virology 212 (1), 128-133 (1995)
   PUBMED   7676622
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015371.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03406.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>532
                     /product="tail fiber protein"
                     /GO_process="GO:0019062 - virion attachment to host cell
                     [Evidence IEA]"
                     /GO_process="GO:0046718 - symbiont entry into host cell
                     [Evidence IEA]"
     Region          5..87
                     /region_name="CarboxypepD_reg"
                     /note="Carboxypeptidase regulatory-like domain; pfam13620"
                     /db_xref="CDD:433354"
     Region          <158..>263
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          <243..>530
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          407..442
                     /region_name="Phage_fiber_2"
                     /note="Phage tail fibre repeat; pfam03406"
                     /db_xref="CDD:427282"
ORIGIN      
        1 msvvvsgtlk spdgeaisga nitltaltvs pdalsgtsas avtreggyyg mtmdpgeyav
       61 svtvkgktav ygrvriegte stvtlnmllr rslvevsipg elltdfrqiq nnvaddlati
      121 rrlnedtatk ntqatqskes aaasaksasd saktatsraa eagqkatdat eaatravtaa
      181 gnaeesstra gesekaagtd aekarqhaek arlaqesage ilkraeaatv saeearrmae
      241 nargprgpqg etgpkgdvgp kgetgpvgpq gpagpkgerg dvgaqgavgp agprgekgeq
      301 gergpqgipg lkgdtgergp kgdqgdmgpk gekgdpggpa gpqgpkgerg eagpqgpmga
      361 rgergetgpr gepgpqgprg ergetgpqgp rgepgpagsa anvadattaq kgivqlssat
      421 dsddeakaat pkavkaamdv aneaktkaee aaagggvpgp kgdkgdsgpa gpagprgvqg
      481 pkgdpgpqgp kgdtgaagak gekgatgatg pqgpkgdtga agpagpqgpk gd
//
LOCUS       WP_258130898             197 aa            linear   BCT 02-MAR-2025
DEFINITION  phage integrase Arm DNA-binding domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_258130898
VERSION     WP_258130898.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 197)
  AUTHORS   Wojciak,J.M., Sarkar,D., Landy,A. and Clubb,R.T.
  TITLE     Arm-site binding by lambda -integrase: solution structure and
            functional characterization of its amino-terminal domain
  JOURNAL   Proc Natl Acad Sci U S A 99 (6), 3434-3439 (2002)
   PUBMED   11904406
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF020572.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF09003.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>197
                     /product="phage integrase Arm DNA-binding
                     domain-containing protein"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0008907 - integrase activity [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          2..62
                     /region_name="Arm-DNA-bind_1"
                     /note="Bacteriophage lambda integrase, Arm DNA-binding
                     domain; pfam09003"
                     /db_xref="CDD:430365"
ORIGIN      
        1 msprprknst dvaalyekfd rrtgkvyyqy knpvtgkfhg lgtdkvkaek iastanqria
       61 aaeaeyfmrk idespsatkr rgirlkawvd rylkiqdsrl kngdiaatth kekvrmaayl
      121 vsrlgnhplk elevrdfali ldewmdkdmv starvnrglw vdiykeaqha gevppgwnpp
      181 eatrkpipkv trsrltl
//
LOCUS       WP_258130900             201 aa            linear   BCT 02-MAR-2025
DEFINITION  tyrosine-type recombinase/integrase, partial [Escherichia coli].
ACCESSION   WP_258130900
VERSION     WP_258130900.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 201)
  AUTHORS   Guo,F., Gopaul,D.N. and van Duyne,G.D.
  TITLE     Structure of Cre recombinase complexed with DNA in a site-specific
            recombination synapse
  JOURNAL   Nature 389 (6646), 40-46 (1997)
   PUBMED   9288963
REFERENCE   2  (residues 1 to 201)
  AUTHORS   Kwon,H.J., Tirumalai,R., Landy,A. and Ellenberger,T.
  TITLE     Flexibility in DNA recombination: structure of the lambda integrase
            catalytic core
  JOURNAL   Science 276 (5309), 126-131 (1997)
   PUBMED   9082984
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012798.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00589.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..201
                     /product="tyrosine-type recombinase/integrase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence
                     IEA]"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          27..197
                     /region_name="DNA_BRE_C"
                     /note="DNA breaking-rejoining enzymes, C-terminal
                     catalytic domain; cl00213"
                     /db_xref="CDD:469662"
     Site            order(41,55..56,130,132,156,188)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:271181"
     Site            order(55,156,159,179,188)
                     /site_type="active"
                     /db_xref="CDD:271181"
ORIGIN      
        1 evppgwnppe atrkpipkvt rsrltledwq kiynatpekh firnamllai vtgqrrddic
       61 hmrfsdvwng hlhitqgktg mrlalpltlr cdeigvslke vidgcrdrml spylihsrqq
      121 kqpkpmskdn lsdyfakard lagiippagk tpptfheqrs lserlyraqg vdtktllghk
      181 vqattdrynd trgqewvklv i
//
LOCUS       WP_258130907             165 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein, partial [Escherichia coli].
ACCESSION   WP_258130907
VERSION     WP_258130907.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 165)
  AUTHORS   Wang,J., Hofnung,M. and Charbit,A.
  TITLE     The C-terminal portion of the tail fiber protein of bacteriophage
            lambda is responsible for binding to LamB, its receptor at the
            surface of Escherichia coli K-12
  JOURNAL   J Bacteriol 182 (2), 508-512 (2000)
   PUBMED   10629200
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024939.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13550.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>165
                     /product="phage tail protein"
     Region          <1..>165
                     /region_name="COG4733"
                     /note="Phage-related protein, tail protein J [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443767"
ORIGIN      
        1 hprygmgkrl gaadvdkwal yaigqycdqr vpdgfggtep rmtfnaylsq qrkawdvlsd
       61 fcsamrcmpv wngqtltfvq drpsdvvwpy tnsdvvvddn gvgfrysfsa lkdrhtavev
      121 nytdpqngwq tstelvedpe ailrygrnll kmdafgctsr gqahr
//
LOCUS       WP_258130982             356 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF998 domain-containing protein [Microbacterium sp. MYb66].
ACCESSION   WP_258130982
VERSION     WP_258130982.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb66
  ORGANISM  Microbacterium sp. MYb66
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017959.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06197.19
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Microbacterium sp. MYb66"
                     /db_xref="taxon:1848692"
     Protein         1..356
                     /product="DUF998 domain-containing protein"
                     /calculated_mol_wt=36102
ORIGIN      
        1 merearlrae travwatvlc fvvgaltgil lleggggtrp ltgegslamp vaaiagivaa
       61 aafltstllh rrgetapmpr wqtvvsnlst ialtvafgav tvmgvllaae vlaagleglr
      121 lgavggglla gvasavggrf afgaaiglrt adlaallfgf lvigtlfamv taadprwwet
      181 nfsqlgsgsw afngtlvvag llvatvgsyi grdlhrmlgd dalgriaavv alwaatgval
      241 aavgllplqr vpiphdvaas atlvlfaaaa attvaaipgl pralmitslg vgllivvavv
      301 swfpfglysa taleavvvgl gllwmatlvr vlailvppqs rpsarrtllr dragpp
//
LOCUS       WP_258130991             186 aa            linear   BCT 02-MAR-2025
DEFINITION  putative immunity protein [Microbacterium sp. MYb66].
ACCESSION   WP_258130991
VERSION     WP_258130991.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb66
  ORGANISM  Microbacterium sp. MYb66
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF044575.3
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF21805.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Microbacterium sp. MYb66"
                     /db_xref="taxon:1848692"
     Protein         1..186
                     /product="putative immunity protein"
                     /calculated_mol_wt=19070
ORIGIN      
        1 mdepqsrrst atpqgmtead rqvvavwaad caervlplfe aeapdddrar daiartrafa
       61 rgelsaaeei rrrfvagraa rsaaspagva aarsaaqaag vahmgahalg aaayaakava
      121 lahpadvdar sgevrrqlaa mspearaalr rlpplgedta gplgpgllat gtlgevirei
      181 qahlgd
//
LOCUS       WP_258131001             576 aa            linear   BCT 02-MAR-2025
DEFINITION  protein kinase domain-containing protein [Microbacterium sp.
            MYb66].
ACCESSION   WP_258131001
VERSION     WP_258131001.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb66
  ORGANISM  Microbacterium sp. MYb66
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 576)
  AUTHORS   Hunter,T. and Plowman,G.D.
  TITLE     The protein kinases of budding yeast: six score and more
  JOURNAL   Trends Biochem Sci 22 (1), 18-22 (1997)
   PUBMED   9020587
REFERENCE   2  (residues 1 to 576)
  AUTHORS   Hanks,S.K. and Hunter,T.
  TITLE     Protein kinases 6. The eukaryotic protein kinase superfamily:
            kinase (catalytic) domain structure and classification
  JOURNAL   FASEB J 9 (8), 576-596 (1995)
   PUBMED   7768349
REFERENCE   3  (residues 1 to 576)
  AUTHORS   Hanks,S.K. and Quinn,A.M.
  TITLE     Protein kinase catalytic domain sequence database: identification
            of conserved features of primary structure and classification of
            family members
  JOURNAL   Methods Enzymol 200, 38-62 (1991)
   PUBMED   1956325
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012298.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00069.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Microbacterium sp. MYb66"
                     /db_xref="taxon:1848692"
     Protein         1..576
                     /product="protein kinase domain-containing protein"
                     /GO_function="GO:0004672 - protein kinase activity
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_process="GO:0006468 - protein phosphorylation
                     [Evidence IEA]"
                     /calculated_mol_wt=59349
     Region          9..>455
                     /region_name="PknB_PASTA_kin"
                     /note="Stk1 family PASTA domain-containing Ser/Thr kinase;
                     NF033483"
                     /db_xref="CDD:468045"
ORIGIN      
        1 mrptqgvsfg gryelqsria iggmgevwea tdhvigrtva ikilkdeymg dpgflerfra
       61 earhaalvnh egiasvfdyg eengsaylvm elvpgealst vlerdgalsa dktldivaqt
      121 asalqaahaa glvhrdikpg nllitpdgrv kitdfgiari adqvpltatg qvmgtvqyls
      181 peqasghpas patdtyslgi vayeclagkr pftgesqvai amaqineqpp plpptvpipv
      241 qnlvmamiak kpadrpsssa tvaraaqalr rgdlnsaaia vpaiatggia gnddatrmln
      301 asgddgatri lpttaqlpte eaaeeekkkk rspwtwplia liallvivlg gtvwamlanq
      361 ggdadptgtp tntqtqsqtp setptpevtr vdvtalnlgg mdcgtatstl tgagfssdit
      421 cvdgdpaptd aevgkvyrvd psgnvettqs itltiyaara glptptdapt itgdpvagst
      481 vtiswgtgft cpsgttlsgy vvslqngtfv sggpnfqptq rntqvkvada egqqlivtyq
      541 gmcsggdqrt saaspplsvp ivaapapgdg ddgadg
//
LOCUS       WP_258131005             328 aa            linear   BCT 02-MAR-2025
DEFINITION  VWA domain-containing protein [Microbacterium sp. MYb66].
ACCESSION   WP_258131005
VERSION     WP_258131005.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb66
  ORGANISM  Microbacterium sp. MYb66
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 328)
  AUTHORS   Bork,P. and Rohde,K.
  TITLE     More von Willebrand factor type A domains? Sequence similarities
            with malaria thrombospondin-related anonymous protein,
            dihydropyridine-sensitive calcium channel and inter-alpha-trypsin
            inhibitor
  JOURNAL   Biochem J 279 (Pt 3) (Pt 3), 908-910 (1991)
   PUBMED   1659389
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012321.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00092.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Microbacterium sp. MYb66"
                     /db_xref="taxon:1848692"
     Protein         1..328
                     /product="VWA domain-containing protein"
                     /calculated_mol_wt=34914
     Region          99..>244
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(106,191,216)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
ORIGIN      
        1 malanvwmli aaaavvlial aiglilglrr ggrlrggdsa riaraerlrt lptfrralar
       61 ralalsgila lgatativag vvaarpmsaq tiqpvntsrd imlcldvsgs mtevdvevln
      121 vfdelldgfe gerigltifn sspvqifplt ddydfirehl asmtksfdyv dqipehwvgt
      181 lngdgaslig dglaacamgf drpddersrs vifatdnein gasivtlqea aayaaskdvr
      241 vfalnpvqgk daavsaelta aaeatggaaf glrdtttvsd ivsqvqeqea telrgeaqvv
      301 wtdtpnlwia llsvfllafv vvlwrvrl
//
LOCUS       WP_258131033             209 aa            linear   BCT 02-MAR-2025
DEFINITION  phosphatase PAP2 family protein [Microbacterium sp. MYb66].
ACCESSION   WP_258131033
VERSION     WP_258131033.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb66
  ORGANISM  Microbacterium sp. MYb66
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 209)
  AUTHORS   Neuwald,A.F.
  TITLE     An unexpected structural relationship between integral membrane
            phosphatases and soluble haloperoxidases
  JOURNAL   Protein Sci 6 (8), 1764-1767 (1997)
   PUBMED   9260289
REFERENCE   2  (residues 1 to 209)
  AUTHORS   Stukey,J. and Carman,G.M.
  TITLE     Identification of a novel phosphatase sequence motif
  JOURNAL   Protein Sci 6 (2), 469-472 (1997)
   PUBMED   9041652
REFERENCE   3  (residues 1 to 209)
  AUTHORS   Messerschmidt,A. and Wever,R.
  TITLE     X-ray structure of a vanadium-containing enzyme: chloroperoxidase
            from the fungus Curvularia inaequalis
  JOURNAL   Proc Natl Acad Sci U S A 93 (1), 392-396 (1996)
   PUBMED   8552646
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013718.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01569.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Microbacterium sp. MYb66"
                     /db_xref="taxon:1848692"
     Protein         1..209
                     /product="phosphatase PAP2 family protein"
                     /calculated_mol_wt=22349
     Region          24..191
                     /region_name="PAP2_like"
                     /note="PAP2_like proteins, a super-family of histidine
                     phosphatases and vanadium haloperoxidases, includes type 2
                     phosphatidic acid phosphatase or lipid phosphate
                     phosphatase (LPP), Glucose-6-phosphatase,
                     Phosphatidylglycerophosphatase B and bacterial acid...;
                     cl00474"
                     /db_xref="CDD:469784"
     Site            order(105,112,127..129,164,170,174)
                     /site_type="active"
                     /db_xref="CDD:239486"
ORIGIN      
        1 mnrrmllwwg vgllalatvl gavvvfaype tpgfdrwwnd tvagfraewm ldfalalnwi
       61 gggwvailgv pvlailalvl arrwrgavfa aacfaasaga vqllkqlfgr arpddmlvvs
      121 dygsfpsght anaatialvl wvlfprvwva ivgalwvlam alsrtflsvh watdtlggai
      181 vgagvvlvla awllpwaqrt kaqvdapig
//
LOCUS       WP_258131039             776 aa            linear   BCT 02-MAR-2025
DEFINITION  FtsK/SpoIIIE domain-containing protein [Bacillus thuringiensis].
ACCESSION   WP_258131039
VERSION     WP_258131039.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis
  ORGANISM  Bacillus thuringiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 776)
  AUTHORS   Begg,K.J., Dewar,S.J. and Donachie,W.D.
  TITLE     A new Escherichia coli cell division gene, ftsK
  JOURNAL   J Bacteriol 177 (21), 6211-6222 (1995)
   PUBMED   7592387
REFERENCE   2  (residues 1 to 776)
  AUTHORS   Wu,L.J. and Errington,J.
  TITLE     Bacillus subtilis SpoIIIE protein required for DNA segregation
            during asymmetric cell division
  JOURNAL   Science 264 (5158), 572-575 (1994)
   PUBMED   8160014
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013727.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01580.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Bacillus thuringiensis"
                     /db_xref="taxon:1428"
     Protein         1..776
                     /product="FtsK/SpoIIIE domain-containing protein"
                     /GO_function="GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /calculated_mol_wt=87067
     Region          <405..667
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
ORIGIN      
        1 msfdsrnfvs dddlakerqd rqdrqnppsv ehgqggdpfs dldidamfsn pspssptdnn
       61 nsfnsfgdap plgqplgggn dpflnpiggi ppmggmnqpp tpfgqppqqp ksdeekimda
      121 gkkswsfikd lgsgfhdlks tptnwsmtgr nlvkmsaiac glsfatmmif kkdvmdfmmg
      181 sgftaivgvl llsfnndkar mikgtdgeee qpfdinkieg dplpqddifa nafatepnmv
      241 vnldkpplee vqpfdsyeed edegeeddde fddgwdefde eeddeydeed deitefvtvd
      301 eaptdiatvl tdvdqvpagm ytrhflyeny kkaltsitps ysdtiylded eddewdaysr
      361 lirevqqqmd lesgaddyes dlseilsvek rlltvyveat rpkklknski eefnrelsni
      421 vsrvkgrlve grysqtiavg ntiyitiftg etasvsvkda iikeqdffln tdnripvvmg
      481 fnelgdtikt dlydvesilt agmprggktf svktvmsqmv qfcspsevnf yfadvkgkvs
      541 dwyqfrtphv rrfesnpqdi itmlthltev egprrekima evgvtnlkdy nqvphdvelp
      601 miyvvidema tlmqkltdkd kklfharmvd lvtkmpgfgl rlwgiphlvk ndiipktvsd
      661 lipckisvkg deshveattg akpskfkfkl shvgdcavnm plissdvffm hsfilakngt
      721 gvtrvldyqa klweklepds ikgslayqld ntnkqkvild kldlpsepvf gkdgmy
//
LOCUS       WP_258131056            1372 aa            linear   BCT 02-MAR-2025
DEFINITION  PQQ-dependent sugar dehydrogenase [Microbacterium sp. MYb66].
ACCESSION   WP_258131056
VERSION     WP_258131056.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb66
  ORGANISM  Microbacterium sp. MYb66
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 1372)
  AUTHORS   Pallanca,J.E. and Smirnoff,N.
  TITLE     Ascorbic acid metabolism in pea seedlings. A comparison of
            D-glucosone, L-sorbosone, and L-galactono-1,4-lactone as ascorbate
            precursors
  JOURNAL   Plant Physiol 120 (2), 453-462 (1999)
   PUBMED   10364396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019607.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07995.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1372
                     /organism="Microbacterium sp. MYb66"
                     /db_xref="taxon:1848692"
     Protein         1..1372
                     /product="PQQ-dependent sugar dehydrogenase"
                     /calculated_mol_wt=146536
     Region          256..692
                     /region_name="YliI"
                     /note="Glucose/arabinose dehydrogenase, beta-propeller
                     fold [Carbohydrate transport and metabolism]; COG2133"
                     /db_xref="CDD:441736"
     Region          <865..971
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
ORIGIN      
        1 mrrtgalvaa aavvgallta tpaaaaepft elvdfeayer valngqdgwa asaaprviad
       61 plngnnqvve svgggqqsyr aipaiaegdt gtlffrflrt gnvdtsfglt dvdapndyan
      121 srayvnnqnd dvlrvrdgga fkpagvwsrd awqcvwivad naadkvtvys qggayetqtr
      181 lpegteqqfg frqavngald rffwkngass agrlllddva vdntgenlai atgnpgdcap
      241 ggtaseplln plpdpaladl gievtelaql pksqttpatq dqrlvrhnri thldevpdds
      301 grlmvpdnnd ilylvdkesg eyvpylnvrn efvdnfhnsa glgtglgsae fhpdfaengl
      361 fytvhteggt altedtpdfp afgttafhsv itewkaddps aatfagthre vmripfagrv
      421 htvqqiafnp tvsegdadyg nlyvlvgdgg ngvgngnpqd latpqgkilr vdptgddsen
      481 geygvpadnp fvdeadalpe iyavgmrdph riswdtegdh tmylahigew qvesvyavep
      541 gdnfgwsvre gsflaenrqi fplpaddaen gftypvaayd hnrdpgqtgd agvavnggfv
      601 yrgeipelqg rylftdlvrg wvlstdaeem vrndgdiddl atieelrvfa dgvettfqel
      661 vgdkrvdlrf gsdadgelyl vskangkiwk vtgarsveep tnpfvlpala pnlvthhdfd
      721 hpdaakptie ldqgrsgtdi slinggvemr vadraypgag ealqtqqmsp rtasnddwka
      781 giydadgves ldrfagtdka svmgwfkptg dhpalnsgta npddvynaig lagvltgtsd
      841 ghavrallev itvdgelklv algrrvdgag swtfaadlpw neilkkgqwv hlaatfdfaa
      901 gemklfmnge elagkytaan pwgdgstsdt apagikiggs fpqntkeanp fngrmddiml
      961 ldtvptaeqv aaqyalyavp pvepptpptc tpdgevitdv mgegdwaprt pakwdfpgdd
     1021 vvlteagtnp ndgirrpfey avltegpelg sfdltgqvrl dekasvnnrd viivfgwksd
     1081 teyyyahlsq dnsiyphngi fkvnkadrer iddqwdgavg appavtdeew hdvrvvrcvd
     1141 sgdiavyvdg ldtplmtand ktfpegrvgf gsfdnfgrlr dlsvtaaatd ttapvatvks
     1201 gaeftvgrdg iyskvsfalq degtidrltl ngvekdltna awsdlngvvp gafgavegan
     1261 tlvvydvagn attvtftldv taptvtvkeg dqftvganga yslvsyklnd agkvdrltvn
     1321 gvakdltdnv wsdlnflkpg afgavsgant lvvydvagna ttvpftvtga gg
//
LOCUS       WP_258131141             212 aa            linear   BCT 02-MAR-2025
DEFINITION  RpiB/LacA/LacB family sugar-phosphate isomerase [Microbacterium sp.
            MYb66].
ACCESSION   WP_258131141
VERSION     WP_258131141.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb66
  ORGANISM  Microbacterium sp. MYb66
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 212)
  AUTHORS   Zhang,R.G., Andersson,C.E., Skarina,T., Evdokimova,E.,
            Edwards,A.M., Joachimiak,A., Savchenko,A. and Mowbray,S.L.
  TITLE     The 2.2 A resolution structure of RpiB/AlsB from Escherichia coli
            illustrates a new approach to the ribose-5-phosphate isomerase
            reaction
  JOURNAL   J Mol Biol 332 (5), 1083-1094 (2003)
   PUBMED   14499611
REFERENCE   2  (residues 1 to 212)
  AUTHORS   Sorensen,K.I. and Hove-Jensen,B.
  TITLE     Ribose catabolism of Escherichia coli: characterization of the rpiB
            gene encoding ribose phosphate isomerase B and of the rpiR gene,
            which is involved in regulation of rpiB expression
  JOURNAL   J Bacteriol 178 (4), 1003-1011 (1996)
   PUBMED   8576032
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10002173
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Microbacterium sp. MYb66"
                     /db_xref="taxon:1848692"
     Protein         1..212
                     /product="RpiB/LacA/LacB family sugar-phosphate isomerase"
                     /EC_number="5.3.1.-"
                     /GO_function="GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=22636
     Region          34..157
                     /region_name="RpiB"
                     /note="Ribose 5-phosphate isomerase RpiB [Carbohydrate
                     transport and metabolism]; COG0698"
                     /db_xref="CDD:440462"
ORIGIN      
        1 msaaigqeda gsagdeieag kgdagmkraa dkqvvvgsdf agfalkeavk ahleergwtv
       61 edltpvesea pmyhragflv gsriaereyd kalafcgsgm gihiaaskvp hvhaavaetv
      121 psarraatan nanllamgaf ytgprlamam adaflesslg ddyeewdgfy eyhligydev
      181 edfdyqayka ngfevphprs arlgpeprgl ay
//
LOCUS       WP_258131264            1517 aa            linear   BCT 02-MAR-2025
DEFINITION  tape measure protein [Escherichia coli].
ACCESSION   WP_258131264
VERSION     WP_258131264.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040129.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20155.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1517
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..1517
                     /product="tape measure protein"
                     /calculated_mol_wt=161072
     Region          233..1031
                     /region_name="HI1514"
                     /note="Phage tail tape-measure protein, controls tail
                     length [Mobilome: prophages, transposons]; COG3941"
                     /db_xref="CDD:443141"
     Region          1150..1215
                     /region_name="Tape_meas_lam_C"
                     /note="Lambda phage tail tape-measure protein
                     (Tape_meas_lam_C); pfam09718"
                     /db_xref="CDD:430770"
ORIGIN      
        1 msqnvefils ledkqftasi dragklltrf geqvtkpaqk iqtferslgs variigvles
       61 kldstadklq dvaagfelas datrkmrgni tslnsglkal iervdtttss vdkltaslrk
      121 vqselndfsd watyasksas rfgtevkeas asvsgmntrl ntttkrlsnw gvttsqaaeg
      181 lkkvreqmde vigrqqlisk pvrvrtsgsg dggsgrrsga sghsgksneg gmfsglrgni
      241 fllgeigdaa rtvtdimfgw qkpiveaaae mermrvmlrg lnkeksnpgq aaaddmkyiv
      301 dmaqnapfam qaltdsfvkf rsagldptdg slkalvdsva rfggdsellk raavavqqms
      361 gkgvvsmeel rqqlgeavpn amqamadaag itmgeltkav asgtveakqa lslmfvglra
      421 enenaakdmm qtytgalaql qtsftlfadr vgqagyldsl skgmkelasi mnsaegisfa
      481 nslgsgltta idglrqlaqw laknqelvin lgkvvaamva fklmragimg vvgagsqmvs
      541 tfatmataiq tpfnlgatav trfnraarmg lapipslifa irgaitglkg afagltafia
      601 anpigaaftv atvavaglit ymtmlrsets kvvdeirkip eamtaakraq madraeklek
      661 qiladqralk ngegvnyvsn sagvithkes kadiearlkk nqeeyqkitg tialgdgava
      721 krlakeaaes qiekiraenq ifaatfvkar qealdkiqki nddgslsdde knkllaplre
      781 tvnksylepa qklvdslssr knatekqiat lndqlekakk dgnteqiqkl qgsirgyqeh
      841 leavaqeltq aeferdnaak tgkgvmsnqg tvlglgttdk aakkalaqym rnqmdsatyq
      901 rtlpdgtpmm dfegkpiigp kqlktqlnlq kassasslek msdeeraaai aaltkareqd
      961 aaaaekaaqr sanasqraak keqaaqqkla agyqkaldka dqlmgqmges skatvsfdqs
     1021 lrdttksltd lanavpnefi tqemidkakk rledlknatp eyremfnrrn veqmistwap
     1081 eadsiisagy tpsreekvad fedtynrnlk alielrdkas dpkvvalytk kinqliaaan
     1141 taliketgta tqklaleyen laeqiestwt dlfsgltdvl tdfvingkms fsslsqsilk
     1201 ditnmvvksq itlplmnmlg mgttaagssq sgnlltgvas avanqgvrmg ntvngdksvg
     1261 eatketsssv tglgqttqqt tsaigtatna igswvsglfd steakdaetk avkdsifsmq
     1321 nlssvtgals aafamlgana sgsgnkwlsf gatvasglvs awagggfdsv tsssaktats
     1381 svadgtkgip aipkfanggi fgkdgviplr ayqkggians pqlalfgegs mneayvplpd
     1441 grtipvtlst dgmsgggnvl spvsieinvh sdgsttesgd tesiwnnaaq rmkaialeti
     1501 aqekrpggsl npntqrn
//
LOCUS       WP_258131329             638 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: endonuclease/exonuclease/phosphatase family protein
            [unclassified Microbacterium].
ACCESSION   WP_258131329
VERSION     WP_258131329.1
KEYWORDS    RefSeq.
SOURCE      unclassified Microbacterium
  ORGANISM  unclassified Microbacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 638)
  AUTHORS   Dlakic,M.
  TITLE     Functionally unrelated signalling proteins contain a fold similar
            to Mg2+-dependent endonucleases
  JOURNAL   Trends Biochem Sci 25 (6), 272-273 (2000)
   PUBMED   10838565
REFERENCE   2  (residues 1 to 638)
  AUTHORS   Mol,C.D., Kuo,C.F., Thayer,M.M., Cunningham,R.P. and Tainer,J.A.
  TITLE     Structure and function of the multifunctional DNA-repair enzyme
            exonuclease III
  JOURNAL   Nature 374 (6520), 381-386 (1995)
   PUBMED   7885481
REFERENCE   3  (residues 1 to 638)
  AUTHORS   Lahm,A. and Suck,D.
  TITLE     DNase I-induced DNA conformation. 2 A structure of a DNase
            I-octamer complex
  JOURNAL   J Mol Biol 222 (3), 645-667 (1991)
   PUBMED   1748997
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015338.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03372.29
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="unclassified Microbacterium"
                     /db_xref="taxon:2609290"
     Protein         1..638
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=66292
     Region          162..358
                     /region_name="ElsH"
                     /note="Metal-dependent hydrolase,
                     endonuclease/exonuclease/phosphatase family [General
                     function prediction only]; COG3568"
                     /db_xref="CDD:442789"
     Region          <313..471
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
ORIGIN      
        1 mtspsrprrg llallgagva fagllvapta haadgdgslt sdaasiaide titfsfdvga
       61 svhdrnwigi yrdgvvpggp asldwryvpd ktgevtwnps trdgwtrnta vmgageydvy
      121 lleddgynvl agpiditvtd aepepplppa epkpevdgks glnvltfnvw hggtqvenga
      181 qqiadiiret dadvtflpev gqapaqvasl lgyqhltatd tgivsrypiv stdtigrwws
      241 kavldvngse vvvygghley rwyttylprg yggeirgdwp agwntwnkld apvtdveail
      301 qaneqsgrpa taaelvadid aeraagrlai vggdfnepps qdwtaatadl fdhngvvapw
      361 qttqtlldgg lvdafrtvyp dpvanpgftw padnvlfpts sltwapeade rdridyifaa
      421 pderlsidga tvvgpqstiv rnqrvvddsa deiltpdavw psdhkavlas ftvcgggcvt
      481 pepgqpslei gsvavaagas vavegtnfpa aavlrielrs tpvllgtatt davgafrttv
      541 svpagttpga hslvvidpdg vettaaitvt aptdgttpgg ipggtpgsgg aaapgsgnar
      601 dgslattgad stpfvlgavl llgvglglvv mhrrrrlg
//
LOCUS       WP_258131349             351 aa            linear   BCT 02-MAR-2025
DEFINITION  BclA C-terminal domain-containing protein [Bacillus cereus].
ACCESSION   WP_258131349
VERSION     WP_258131349.1
KEYWORDS    RefSeq.
SOURCE      Bacillus cereus
  ORGANISM  Bacillus cereus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 351)
  AUTHORS   Kirchdoerfer,R.N., Herrin,B.R., Han,B.W., Turnbough,C.L. Jr.,
            Cooper,M.D. and Wilson,I.A.
  TITLE     Variable lymphocyte receptor recognition of the immunodominant
            glycoprotein of Bacillus anthracis spores
  JOURNAL   Structure 20 (3), 479-486 (2012)
   PUBMED   22405006
REFERENCE   2  (residues 1 to 351)
  AUTHORS   Liu,C.Q., Nuttall,S.D., Tran,H., Wilkins,M., Streltsov,V.A. and
            Alderton,M.R.
  TITLE     Construction, crystal structure and application of a recombinant
            protein that lacks the collagen-like region of BclA from Bacillus
            anthracis spores
  JOURNAL   Biotechnol Bioeng 99 (4), 774-782 (2008)
   PUBMED   17879302
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18573.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Bacillus cereus"
                     /db_xref="taxon:1396"
     Protein         1..351
                     /product="BclA C-terminal domain-containing protein"
                     /calculated_mol_wt=31858
     Region          <70..>214
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          223..351
                     /region_name="BclA_C"
                     /note="BclA C-terminal domain; pfam18573"
                     /db_xref="CDD:436587"
ORIGIN      
        1 msswsnnvng ycgcnnqngv hvdsccfscd gtvpkfgptg ptgatggtgp tgatgvtgdt
       61 gptgatgatg aigptgatgv tgdtgatgpt gatgatgptg atgvtgdtgp tgatgvtgdt
      121 gatgptgatg itgatgptga tgitgatgat gitgatgptg atgvtgatgp tgatgitgat
      181 gptgatgptg atgptgatgv tgatgdtgpt gatgtsitat yafanntsgt aisvllggtn
      241 vplpnnqnig pgitvsggnt vftaanagny yisysinita sllvssriti ngaplagtin
      301 spalattsfs atiittlaag saislqlfgl lavatlsttt pgavltiirl s
//
LOCUS       WP_258131436             144 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF6194 family protein [unclassified Microbacterium].
ACCESSION   WP_258131436
VERSION     WP_258131436.1
KEYWORDS    RefSeq.
SOURCE      unclassified Microbacterium
  ORGANISM  unclassified Microbacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 144)
  AUTHORS   Miyanaga,A., Hayakawa,Y., Numakura,M., Hashimoto,J., Teruya,K.,
            Hirano,T., Shin-Ya,K., Kudo,F. and Eguchi,T.
  TITLE     Identification of the Fluvirucin B2 (Sch 38518) Biosynthetic Gene
            Cluster from Actinomadura fulva subsp. indica ATCC 53714: substrate
            Specificity of the beta-Amino Acid Selective Adenylating Enzyme
            FlvN
  JOURNAL   Biosci Biotechnol Biochem 80 (5), 935-941 (2016)
   PUBMED   26818633
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039682.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19694.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="unclassified Microbacterium"
                     /db_xref="taxon:2609290"
     Protein         1..144
                     /product="DUF6194 family protein"
                     /calculated_mol_wt=15946
     Region          1..144
                     /region_name="DUF6194"
                     /note="Family of unknown function (DUF6194); pfam19694"
                     /db_xref="CDD:466148"
ORIGIN      
        1 mqkiidtvrg ldgvfvvepe agsdfpelsw gdtylyyapd grmpertqpy gtiitkdypd
       61 dtssaldtpg rfrvnihvgr eqtesivdad adptaadvfh rhplygssgw vcvinpaert
      121 adavltllre aheaarsrie rrar
//
LOCUS       WP_258131439             620 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF4430 domain-containing protein [Bacillus cereus
            group].
ACCESSION   WP_258131439
VERSION     WP_258131439.1
KEYWORDS    RefSeq.
SOURCE      Bacillus cereus group
  ORGANISM  Bacillus cereus group
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025833.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF14478.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Bacillus cereus group"
                     /db_xref="taxon:86661"
     Protein         1..620
                     /product="DUF4430 domain-containing protein"
                     /calculated_mol_wt=67623
     Region          60..130
                     /region_name="DUF4430"
                     /note="Domain of unknown function (DUF4430); pfam14478"
                     /db_xref="CDD:433979"
     Region          <152..>247
                     /region_name="PspC_subgroup_2"
                     /note="pneumococcal surface protein PspC, LPXTG-anchored
                     form; NF033839"
                     /db_xref="CDD:468202"
     Region          <344..514
                     /region_name="ISOPREN_C2_like"
                     /note="This group contains class II terpene cyclases,
                     protein prenyltransferases beta subunit, two broadly
                     specific proteinase inhibitors alpha2-macroglobulin (alpha
                     (2)-M) and pregnancy zone protein (PZP) and, the C3 C4 and
                     C5 components of vertebrate...; cd00688"
                     /db_xref="CDD:238362"
ORIGIN      
        1 mamlkkwllt slmavtlvfv sfantvhitf aeentaklai igesqkgiml cpkeeqikdg
       61 etalsllqkv mgdkvesetm sfgtyvkgid glmagatsaw lydvndqsae vgadsyklks
      121 gdvvvfrfvs dwsnisqetl ketldkfgtc kteepkpege ngkptvepkp egengkptve
      181 pkpegengkp tvepkpegen gkptvepkpe gengkptvep kpegengkkp eqpkqenvqi
      241 pakqleeais ktsdkmlqdg iesdwvaval srsgknvpie aklnyvksvt ekvekrinrf
      301 satdlartii mmnaisadpk nvgghnlvqk lyesdkvnsv tgyafallaf dtkkyeipve
      361 skwnrvalve allnnqhtdg gwtynssgsk dsassvdvtg mvlsalapyq ersdvkpaiq
      421 kavaylyneq lqnggfsadg qensnstaqa iiglslvkdv dqnrlhkamq nllsyqlsng
      481 efkwlpsdqn gngmateqal lallqfkemg ksiydwsnvd agdvikpkpi eepekvvepe
      541 nnvvekevie epkeqnqvqq etkdenlkvv vdnepvknkk igngnslpkt gasshsaate
      601 vgmgvlcias ayvlwrrkaa
//
LOCUS       WP_258131499             157 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: SRPBCC domain-containing protein [unclassified
            Microbacterium].
ACCESSION   WP_258131499
VERSION     WP_258131499.1
KEYWORDS    RefSeq.
SOURCE      unclassified Microbacterium
  ORGANISM  unclassified Microbacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 157)
  AUTHORS   Stark,J.L., Mercier,K.A., Mueller,G.A., Acton,T.B., Xiao,R.,
            Montelione,G.T. and Powers,R.
  TITLE     Solution structure and function of YndB, an AHSA1 protein from
            Bacillus subtilis
  JOURNAL   Proteins 78 (16), 3328-3340 (2010)
   PUBMED   20818668
REFERENCE   2  (residues 1 to 157)
  AUTHORS   Lotz,G.P., Lin,H., Harst,A. and Obermann,W.M.
  TITLE     Aha1 binds to the middle domain of Hsp90, contributes to client
            protein activation, and stimulates the ATPase activity of the
            molecular chaperone
  JOURNAL   J Biol Chem 278 (19), 17228-17235 (2003)
   PUBMED   12604615
REFERENCE   3  (residues 1 to 157)
  AUTHORS   Panaretou,B., Siligardi,G., Meyer,P., Maloney,A., Sullivan,J.K.,
            Singh,S., Millson,S.H., Clarke,P.A., Naaby-Hansen,S., Stein,R.,
            Cramer,R., Mollapour,M., Workman,P., Piper,P.W., Pearl,L.H. and
            Prodromou,C.
  TITLE     Activation of the ATPase activity of hsp90 by the stress-regulated
            cochaperone aha1
  JOURNAL   Mol Cell 10 (6), 1307-1318 (2002)
   PUBMED   12504007
REFERENCE   4  (residues 1 to 157)
  AUTHORS   Sevier,C.S. and Machamer,C.E.
  TITLE     p38: A novel protein that associates with the vesicular stomatitis
            virus glycoprotein
  JOURNAL   Biochem Biophys Res Commun 287 (2), 574-582 (2001)
   PUBMED   11554768
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019928.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08327.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="unclassified Microbacterium"
                     /db_xref="taxon:2609290"
     Protein         1..157
                     /product="SRPBCC domain-containing protein"
                     /calculated_mol_wt=17363
     Region          14..155
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(16,18,20,29..31,33..34,50,57,59,61,63,69,71,73,80,
                     82,104..105,107,109,118,120,122,124,134..138,140..141,
                     144..146,149)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176907"
ORIGIN      
        1 mthneasvvd eetfsvrrsi qiaasvdkvw ravaepehvs rwfgrtvldg vgvgatgtms
       61 fpdydviplr veeydeprri tyrwnnddal gklpdavdes tstvftftle eadggtrltv
      121 vesgfertsd pignleshrt gwdleldkmv alvegea
//
LOCUS       WP_258131528             499 aa            linear   BCT 02-MAR-2025
DEFINITION  SpaA isopeptide-forming pilin-related protein, partial [Bacillus
            cereus].
ACCESSION   WP_258131528
VERSION     WP_258131528.1
KEYWORDS    RefSeq.
SOURCE      Bacillus cereus
  ORGANISM  Bacillus cereus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 499)
  AUTHORS   Kang,H.J., Paterson,N.G., Gaspar,A.H., Ton-That,H. and Baker,E.N.
  TITLE     The Corynebacterium diphtheriae shaft pilin SpaA is built of tandem
            Ig-like modules with stabilizing isopeptide and disulfide bonds
  JOURNAL   Proc Natl Acad Sci U S A 106 (40), 16967-16971 (2009)
   PUBMED   19805181
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2009 Oct 27;106(43):18427]
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037639.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17802.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Bacillus cereus"
                     /db_xref="taxon:1396"
     Protein         1..>499
                     /product="SpaA isopeptide-forming pilin-related protein"
     Region          40..321
                     /region_name="pAdhesive_15"
                     /note="Putative Ice-binding-like adhesive domain;
                     pfam20597"
                     /db_xref="CDD:466746"
     Region          <332..>499
                     /region_name="ClfA"
                     /note="Clumping factor A-related surface protein, MSCRAMM
                     (microbial surface components recognizing adhesive matrix
                     molecules) family, DEv-IgG fold [Cell
                     wall/membrane/envelope biogenesis]; COG4932"
                     /db_xref="CDD:443959"
ORIGIN      
        1 mrlrlklvsi hfivllmlsv sfvvyvpqea ygsttnlegl gdisrynavv fgnhkaiggd
       61 iegaiavqgd mdasgytivg aaagtsnivg ekwvdegyps lllsgkfkks reesfiiqng
      121 ivvmtkesdp driiqssydh ivykekleid akfnefrniv nqvsknagqy ktntpipnms
      181 ygigkdinns niyvsseltg knnldirdvf lpsakdkdfi vmysdatevt fkngsilydt
      241 nnigratdiv ptsqpyspns pftelygkvi wvfpnakkit tegygvvgsv fapnavletk
      301 ggsingqafv gavqqtggfe fhnfkfnwqh wnkpstgkvk ikkvdsnndn kklvgakfhi
      361 edsnkkvvge lvtneegeai skdlpignyi lveieapkdy ellkekitvk iekdavveik
      421 ignkklpdpm gkmklvkvdi sdknkklaga kfhiedskgk ivgelvtnee geviskdlpi
      481 gnytlvevea pkgyellke
//
LOCUS       WP_258131641             166 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: transporter substrate-binding domain-containing
            protein [unclassified Microbacterium].
ACCESSION   WP_258131641
VERSION     WP_258131641.1
KEYWORDS    RefSeq.
SOURCE      unclassified Microbacterium
  ORGANISM  unclassified Microbacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 166)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="unclassified Microbacterium"
                     /db_xref="taxon:2609290"
     Protein         1..166
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=17131
     Region          49..>120
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mnrssarrlh lhrrtssaat allvtislsg cgltipadpd gtlntvtgge lrigtapdgd
       61 lvrlddgept gsvvdlvdgf aasihaeaqw tvaseetlvt mldagdldli aggittdtpw
      121 vdkagvtrgy adiegadgre ivmlvplgen aflsslerfl deeagg
//
LOCUS       WP_258131592             663 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: alkaline phosphatase family protein [unclassified
            Microbacterium].
ACCESSION   WP_258131592
VERSION     WP_258131592.1
KEYWORDS    RefSeq.
SOURCE      unclassified Microbacterium
  ORGANISM  unclassified Microbacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 663)
  AUTHORS   Jin-Hua,P., Goding,J.W., Nakamura,H. and Sano,K.
  TITLE     Molecular cloning and chromosomal localization of PD-Ibeta (PDNP3),
            a new member of the human phosphodiesterase I genes
  JOURNAL   Genomics 45 (2), 412-415 (1997)
   PUBMED   9344668
REFERENCE   2  (residues 1 to 663)
  AUTHORS   Peiffer,W.E., Desrosiers,M.G. and Menick,D.R.
  TITLE     Cloning and expression of the unique Ca2+-ATPase from
            Flavobacterium odoratum
  JOURNAL   J Biol Chem 271 (9), 5095-5100 (1996)
   PUBMED   8617788
REFERENCE   3  (residues 1 to 663)
  AUTHORS   Deissler,H., Lottspeich,F. and Rajewsky,M.F.
  TITLE     Affinity purification and cDNA cloning of rat neural
            differentiation and tumor cell surface antigen gp130RB13-6 reveals
            relationship to human and murine PC-1
  JOURNAL   J Biol Chem 270 (17), 9849-9855 (1995)
   PUBMED   7730366
REFERENCE   4  (residues 1 to 663)
  AUTHORS   Murata,J., Lee,H.Y., Clair,T., Krutzsch,H.C., Arestad,A.A.,
            Sobel,M.E., Liotta,L.A. and Stracke,M.L.
  TITLE     cDNA cloning of the human tumor motility-stimulating protein,
            autotaxin, reveals a homology with phosphodiesterases
  JOURNAL   J Biol Chem 269 (48), 30479-30484 (1994)
   PUBMED   7982964
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013799.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01663.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="unclassified Microbacterium"
                     /db_xref="taxon:2609290"
     Protein         1..663
                     /product="alkaline phosphatase family protein"
                     /calculated_mol_wt=68831
     Region          5..>212
                     /region_name="AtaC"
                     /note="c-di-AMP phosphodiesterase AtaC or nucleotide
                     pyrophosphatase, AlkP superfamily [Signal transduction
                     mechanisms]; COG1524"
                     /db_xref="CDD:441133"
     Region          <186..291
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
     Region          544..661
                     /region_name="Invasin_D3"
                     /note="Invasin, domain 3; cl23771"
                     /db_xref="CDD:474048"
ORIGIN      
        1 mstlsvipaa avgdakpvkt lvvgidgasf dflddadmpn ldalmargmv sssnlygtpl
       61 agtisgpgws tiatgvwpdk hnvvdnnfts prydlypdyl srieaaqpar stavvatwap
      121 iattifgstv dsrvqggnda gttakaveti aggaddvfvh ldevdgaghs tgtngaayar
      181 alakadgeig qilaavdarp ddeewlivvt adhghtptgg hggsspaerk vfvvaagpgi
      241 epgvrndvki sdvaptvlsa vgiaadpawn ldgtalsala pdafdslrpv lqtradetrp
      301 gadvlgwtrs apegwsidns rmpsggvkew sgwsfatdef wtnvelgqrr etsvrardvf
      361 avadsdewdd kshsagafds tlvspayplt gastamlsya tnyfidgpqs aevlvsfdgg
      421 eprslkaysa ntntnealsf dvpagartaq frfhytgtns afwvvdrval gqapapvdtq
      481 kpvatlvapt tagptpqvql qvnatddvgl krivanvykd gklvkstqsa mngatsgihq
      541 atlaladgsy tvkynaedla gniaqtgafa faidttppta tikdgasftv gsggthdlvs
      601 yklfdagkvs lvtingitkd ltdntwsdvn flkpgtfgav sgqntmvvqd vagntttvsf
      661 tln
//
LOCUS       WP_258131662             592 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2326 domain-containing protein [Bacillus cereus].
ACCESSION   WP_258131662
VERSION     WP_258131662.1
KEYWORDS    RefSeq.
SOURCE      Bacillus cereus
  ORGANISM  Bacillus cereus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF021594.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10088.15
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Bacillus cereus"
                     /db_xref="taxon:1396"
     Protein         1..592
                     /product="DUF2326 domain-containing protein"
                     /calculated_mol_wt=69296
     Region          1..587
                     /region_name="YydB"
                     /note="Uncharacterized conserved protein YydD, contains
                     DUF2326 domain [Function unknown]; COG5293"
                     /db_xref="CDD:444096"
ORIGIN      
        1 mklsklycsn nnvfqpiffn dglnivlaek rdpmnktkst hdlgktllat vidycllkev
       61 rkdyflkknk klfsdlvfyl eiklnngefc tirravqgkn qvslamhneq vffdensywd
      121 fnggirkaki klndilqfnv lptreyratl pyflrapqsf gnvfrtvnfi qnqdvewkpi
      181 iaellgfkse iivekyildy kisnvkeeik qltnnntlnn sarndekfal lqvkkdmlln
      241 kekviktlnl kvpdenimsi lvedidkdiq qllvdnyykk tqlrkakssl mdfkvnfeai
      301 eelysqiniy fssqlvkdyd dvidfneqlf qernqilaei ieessnkikf nenkieelnn
      361 tksdlmeyir sedsfdklki lereiidlkv gieqiekein ivndtkelel qnqeldidqa
      421 nvvydlkkei ykeneilasi kknfleiiys tlgegatidv klngkknief haeivdlqna
      481 rqssrdkgtt ykklmccafd lavlatyyes syfhfvyhdg vfdgldsrqk nnyyeviqky
      541 vsefdiqyif sviedelppd ikdldvlken gtiirvlhdm gnmgrlfnvd pf
//
LOCUS       WP_258131664             174 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC-three component system protein [Bacillus cereus].
ACCESSION   WP_258131664
VERSION     WP_258131664.1
KEYWORDS    RefSeq.
SOURCE      Bacillus cereus
  ORGANISM  Bacillus cereus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 174)
  AUTHORS   Krishnan,A., Burroughs,A.M., Iyer,L.M. and Aravind,L.
  TITLE     Comprehensive classification of ABC ATPases and their functional
            radiation in nucleoprotein dynamics and biological conflict systems
  JOURNAL   Nucleic Acids Res 48 (18), 10045-10075 (2020)
   PUBMED   32894288
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042656.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20279.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Bacillus cereus"
                     /db_xref="taxon:1396"
     Protein         1..174
                     /product="ABC-three component system protein"
                     /calculated_mol_wt=20673
     Region          26..169
                     /region_name="CTD12"
                     /note="C-terminal domain 12 of the ABC-three component
                     (ABC-3C) systems; pfam20279"
                     /db_xref="CDD:466429"
ORIGIN      
        1 mmdypsqqan sihnigrdqy nqfnyhdspi iidpiemgnl insfyenidq leqqleilvi
       61 krteihikne lngmsddyfe taikeylpdf eqirlflgds rnrthnkryk yivreinakl
      121 sayknrypdf neafevltsn yiqnlhvnfe kktlvrtffa ymyftcdvgk nkvg
//
LOCUS       WP_258131675             416 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: aminotransferase class I/II-fold pyridoxal
            phosphate-dependent enzyme [unclassified Microbacterium].
ACCESSION   WP_258131675
VERSION     WP_258131675.1
KEYWORDS    RefSeq.
SOURCE      unclassified Microbacterium
  ORGANISM  unclassified Microbacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 416)
  AUTHORS   Ko,T.P., Wu,S.P., Yang,W.Z., Tsai,H. and Yuan,H.S.
  TITLE     Crystallization and preliminary crystallographic analysis of the
            Escherichia coli tyrosine aminotransferase
  JOURNAL   Acta Crystallogr D Biol Crystallogr 55 (Pt 8), 1474-1477 (1999)
   PUBMED   10417420
REFERENCE   2  (residues 1 to 416)
  AUTHORS   Nakai,T., Okada,K., Akutsu,S., Miyahara,I., Kawaguchi,S., Kato,R.,
            Kuramitsu,S. and Hirotsu,K.
  TITLE     Structure of Thermus thermophilus HB8 aspartate aminotransferase
            and its complex with maleate
  JOURNAL   Biochemistry 38 (8), 2413-2424 (1999)
   PUBMED   10029535
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012382.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00155.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="unclassified Microbacterium"
                     /db_xref="taxon:2609290"
     Protein         1..416
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /GO_function="GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /GO_process="GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /calculated_mol_wt=44622
     Region          13..411
                     /region_name="PRK09265"
                     /note="aminotransferase AlaT; Validated"
                     /db_xref="CDD:181738"
ORIGIN      
        1 mtpprpggae hrigrssrle gvlydlrgpv aeraaelekr gesilrlnig npapfgfeap
       61 daivealrsa lphahgyses aglpetreai sghyalragf palgidditv gngvselvgl
      121 tlqalieqgd evlipspdyp lwtastvlag gravhypcve sdgwtpdlaa mesligprtv
      181 aivvinpnnp tgavygravl eqiaelarrh gllllsdeiy drvvypgceh vsmaqvapdv
      241 pcvtfaglsk thrvagyraa wmtttgfhrd dpflsgvrll asmrmcasvp aqhaitaalt
      301 qdtsldalva pdgrltrqrd aalaaldaia gvdtqpaggg lylfprldpn vhriddderl
      361 vldfldaeri llvhgrafnl ntpdhlriaf lpesdvltda iqrfgvflng yspprr
//
LOCUS       WP_258131696             484 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyltransferase family 39 protein [Bacillus cereus].
ACCESSION   WP_258131696
VERSION     WP_258131696.1
KEYWORDS    RefSeq.
SOURCE      Bacillus cereus
  ORGANISM  Bacillus cereus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024629.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13231.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Bacillus cereus"
                     /db_xref="taxon:1396"
     Protein         1..484
                     /product="glycosyltransferase family 39 protein"
                     /EC_number="2.4.-.-"
                     /calculated_mol_wt=55672
     Region          69..>257
                     /region_name="ArnT"
                     /note="PMT family glycosyltransferase ArnT/Agl22, involved
                     in glycosylation of proteins and lipid IVA [Cell
                     wall/membrane/envelope biogenesis]; COG1807"
                     /db_xref="CDD:441412"
ORIGIN      
        1 mpitafnrin sfltksllil cliilswitw esyltisdkl dvpnsvslpi migiglvfli
       61 vaclinkyms sltfvisltl lafivrliwi lqipsvplsd faimynsaiq aahgdfsftn
      121 tiyftswvyq lgftmyeali ikifgegifa lqflnvlfct gttifvykia aktfnewsgr
      181 iaglmyalyi psimlssvlt nqhlatfffy fgfyllvtkg lqseymwifi gtllslgdim
      241 rplgmlilia vaiyiflhgm lgkpkkiifn sfkklcgifi vfylvhymis fafissgitq
      301 yplsnrdplw kfvvglnhet kggyshedag himsleigee rtleekkiik erladkdkvi
      361 slfeekfalm wgdtdsspsw slytpnfeil dgmqdlkena ilyerymyta amffgiiail
      421 ylivtkqdnl hytlfllliv gyvlihllie yqtryryfii psfsiiqsyg iyvcfqyvrk
      481 fkrn
//
LOCUS       WP_258131812             298 aa            linear   BCT 02-MAR-2025
DEFINITION  BclA C-terminal domain-containing protein [Bacillus cereus].
ACCESSION   WP_258131812
VERSION     WP_258131812.1
KEYWORDS    RefSeq.
SOURCE      Bacillus cereus
  ORGANISM  Bacillus cereus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 298)
  AUTHORS   Kirchdoerfer,R.N., Herrin,B.R., Han,B.W., Turnbough,C.L. Jr.,
            Cooper,M.D. and Wilson,I.A.
  TITLE     Variable lymphocyte receptor recognition of the immunodominant
            glycoprotein of Bacillus anthracis spores
  JOURNAL   Structure 20 (3), 479-486 (2012)
   PUBMED   22405006
REFERENCE   2  (residues 1 to 298)
  AUTHORS   Liu,C.Q., Nuttall,S.D., Tran,H., Wilkins,M., Streltsov,V.A. and
            Alderton,M.R.
  TITLE     Construction, crystal structure and application of a recombinant
            protein that lacks the collagen-like region of BclA from Bacillus
            anthracis spores
  JOURNAL   Biotechnol Bioeng 99 (4), 774-782 (2008)
   PUBMED   17879302
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037852.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18573.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Bacillus cereus"
                     /db_xref="taxon:1396"
     Protein         1..298
                     /product="BclA C-terminal domain-containing protein"
                     /calculated_mol_wt=27946
     Region          122..164
                     /region_name="Collagen"
                     /note="Collagen triple helix repeat (20 copies);
                     pfam01391"
                     /db_xref="CDD:460189"
     Region          172..298
                     /region_name="BclA_C"
                     /note="BclA C-terminal domain; pfam18573"
                     /db_xref="CDD:436587"
ORIGIN      
        1 msnnnysngl npdeslsasa fdpnlvgptl ppippftlpt gptgptgptg ptvptgptgp
       61 tgptgptgpt gptgptgptg vtgttgptgp tgdtgatgpt gptgdtgttg ptgptgdtga
      121 tgptgptgdt gatgptgptg dtgatgptgp tgatgptgpt gpsglglpag lyafnsagis
      181 ldlglnapvp fntvgsqfgt aisqldadtf viaetgfyki tvivytaais vlggltiqvn
      241 gvsvpgtgat lisvgapivv qaitqitttp slvevivtgl glslalgtna siiiekva
//
LOCUS       WP_258131824             275 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: DUF4037 domain-containing protein [Bacillus cereus
            group].
ACCESSION   WP_258131824
VERSION     WP_258131824.1
KEYWORDS    RefSeq.
SOURCE      Bacillus cereus group
  ORGANISM  Bacillus cereus group
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024626.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13228.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Bacillus cereus group"
                     /db_xref="taxon:86661"
     Protein         1..275
                     /product="DUF4037 domain-containing protein"
                     /calculated_mol_wt=32168
     Region          3..>62
                     /region_name="MJ0604"
                     /note="Predicted nucleotidyltransferase, MJ0604 family
                     [General function prediction only]; COG1708"
                     /db_xref="CDD:441314"
     Region          115..210
                     /region_name="DUF4037"
                     /note="Domain of unknown function (DUF4037); pfam13228"
                     /db_xref="CDD:433045"
ORIGIN      
        1 mglkekaiem seiyrqnpkv eaiilagsva rkledehsdi elhilwstpp ededrrapih
       61 hidgtilsyy pyeeeewset yltkegikle isnfltetve kvisdvvdqy disyekqciv
      121 ssvhdgvsly geekvnelkd rvvvypdelv krmisenlwl snrwqnrkal lkrkdwlmly
      181 dvicevqrnv fgvlfglnkm yvhhpafkwm pnnvermtik penlyermad tligspensv
      241 qelellieev lqqvhtyapg vnvdeqeksi fyfvk
//
LOCUS       WP_258131840              37 aa            linear   BCT 02-MAR-2025
DEFINITION  IS3 family transposase, partial [Bacillus cereus].
ACCESSION   WP_258131840
VERSION     WP_258131840.1
KEYWORDS    RefSeq.
SOURCE      Bacillus cereus
  ORGANISM  Bacillus cereus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024729.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13333.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..37
                     /organism="Bacillus cereus"
                     /db_xref="taxon:1396"
     Protein         <1..37
                     /product="IS3 family transposase"
                     /GO_process="GO:0015074 - DNA integration [Evidence IEA]"
     Region          <1..37
                     /region_name="Tra5"
                     /note="Transposase InsO and inactivated derivatives
                     [Mobilome: prophages, transposons]; COG2801"
                     /db_xref="CDD:442053"
ORIGIN      
        1 hfkielekyi dyyntkrika klkmslvqyr thfyqaa
//
LOCUS       WP_258131858             194 aa            linear   BCT 02-MAR-2025
DEFINITION  helix-turn-helix domain-containing protein [Bacillus cereus].
ACCESSION   WP_258131858
VERSION     WP_258131858.1
KEYWORDS    RefSeq.
SOURCE      Bacillus cereus
  ORGANISM  Bacillus cereus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025107.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13730.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Bacillus cereus"
                     /db_xref="taxon:1396"
     Protein         1..194
                     /product="helix-turn-helix domain-containing protein"
                     /calculated_mol_wt=22433
     Region          16..>117
                     /region_name="COG3355"
                     /note="Predicted transcriptional regulator
                     [Transcription]"
                     /db_xref="CDD:442583"
ORIGIN      
        1 mtntvtkitg tgiickgnve gnfeqvpmel fdyiqlglit htdlivyvkl lqlynenygy
       61 ayptveklmv htriaskati hnslkrlgev gliykskgnr gnnvyvaykp lskaelygff
      121 pdeveqfkkf kakwikiadq dkkrfeqhlq ekqlreqqeq qiqarqvipk eetatfddme
      181 nlplkelsrl srdn
//
LOCUS       WP_258131353             924 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: NEAT domain-containing protein [Bacillus cereus
            group].
ACCESSION   WP_258131353
VERSION     WP_258131353.1
KEYWORDS    RefSeq.
SOURCE      Bacillus cereus group
  ORGANISM  Bacillus cereus group
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (residues 1 to 924)
  AUTHORS   Sheldon,J.R. and Heinrichs,D.E.
  TITLE     Recent developments in understanding the iron acquisition
            strategies of gram positive pathogens
  JOURNAL   FEMS Microbiol Rev 39 (4), 592-630 (2015)
   PUBMED   25862688
REFERENCE   2  (residues 1 to 924)
  AUTHORS   Honsa,E.S., Maresso,A.W. and Highlander,S.K.
  TITLE     Molecular and evolutionary analysis of NEAr-iron Transporter (NEAT)
            domains
  JOURNAL   PLoS One 9 (8), e104794 (2014)
   PUBMED   25153520
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016890.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05031.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..924
                     /organism="Bacillus cereus group"
                     /db_xref="taxon:86661"
     Protein         1..924
                     /product="NEAT domain-containing protein"
                     /calculated_mol_wt=103386
     Region          1..279
                     /region_name="NEAT"
                     /note="Heme-binding NEAT domain [Inorganic ion transport
                     and metabolism]; COG5386"
                     /db_xref="CDD:444149"
     Region          <311..>361
                     /region_name="PspC_subgroup_2"
                     /note="pneumococcal surface protein PspC, LPXTG-anchored
                     form; NF033839"
                     /db_xref="CDD:468202"
     Region          357..646
                     /region_name="NEAT"
                     /note="Heme-binding NEAT domain [Inorganic ion transport
                     and metabolism]; COG5386"
                     /db_xref="CDD:444149"
     Region          546..813
                     /region_name="NEAT"
                     /note="Heme-binding NEAT domain [Inorganic ion transport
                     and metabolism]; COG5386"
                     /db_xref="CDD:444149"
     Region          717..922
                     /region_name="IsdC"
                     /note="heme uptake protein IsdC; TIGR03656"
                     /db_xref="CDD:274705"
ORIGIN      
        1 mnrytkiiva mflmiftfvs tlqplavqaa tkladgeysi gfkvlkdtsd eesmmnqysv
       61 spgtlkvkdg kkkvsftltn sswitkfete kagklvatnv isedkekdtr vvefdvedve
      121 kvlnakvkvd idflnyhhey dvriafdqns itpihvekpn ekedpankpd pnettdpgqk
      181 pdqkpdpdqq pnsntitdga ysipfkvlkd qtdeeskmnt ymvnpgvlkv engkkkaivt
      241 lksssliknf qtekdgafvd akvvsedkek dtrvvefevn dlskklntkv fiemasrnyk
      301 qthdvqllfe qdkleqikne ekqpevekpe vekpeaekpe vekpeaekpd enkkpdaeti
      361 kdgeysinfk alkdqtdeis mmntytkspg vlkvkdgkky vsftltnssw itkfefekng
      421 sfvdahvise dkkadtrvve vevpdlskkl nakvkvdids mnyhhfydiq fafdkgsikp
      481 ldsqggnnnq ggnnnqggnd nqggndnqgg ndnqggndnq ggnnnqggnd nqggndnqdn
      541 nttidpkalk dgeysigfkv lkdqtdeism mntytkspgv lkvkdgkkyv sftltnstwi
      601 tkfefekngs fvnakvlsen keqntrvvev evndlskkln akvkvdidsm nyhhfydvqf
      661 vfdqdsikal gnqggndnqg gndnqggngn qggngnqggn dnqggnnnpk vivdpknlvd
      721 gqyditfkvl kdktdeiskm ndyvvnpakl ivkdgkkyie mtlknsawit kfqtenkelf
      781 adakvvsedk nantrvvqfg vedlfkklna kvkvdidemn yhhfydvqiq fdtnnigalg
      841 tikeepknep knpvttpkvd nvktvgtpdf nrnadgqkkk edtkndskke knsktadtaq
      901 lglymvlllg slallvrkyr agrl
//
LOCUS       WP_258132049             151 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein
            [Microbacterium sp. MYb62].
ACCESSION   WP_258132049
VERSION     WP_258132049.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb62
  ORGANISM  Microbacterium sp. MYb62
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 151)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Microbacterium sp. MYb62"
                     /db_xref="taxon:1848690"
     Protein         1..151
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=15509
     Region          9..>118
                     /region_name="MltF"
                     /note="Membrane-bound lytic murein transglycosylase MltF
                     [Cell wall/membrane/envelope biogenesis, Signal
                     transduction mechanisms]; COG4623"
                     /db_xref="CDD:443662"
ORIGIN      
        1 mqialgimla aslagcgltv ptdpegtlas vtggelrvgt spdgdlvevt rdgptgsivd
       61 lvdrfadsvd aetewtvase etlvtmleag eldliaggit adtpwvdkag vtrgyrtidg
      121 adgreivmlv plgenaflss lerfldeevg g
//
LOCUS       WP_258132115             933 aa            linear   BCT 02-MAR-2025
DEFINITION  S-layer homology domain-containing protein [Bacillus cereus].
ACCESSION   WP_258132115
VERSION     WP_258132115.1
KEYWORDS    RefSeq.
SOURCE      Bacillus cereus
  ORGANISM  Bacillus cereus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 933)
  AUTHORS   Mesnage,S., Fontaine,T., Mignot,T., Delepierre,M., Mock,M. and
            Fouet,A.
  TITLE     Bacterial SLH domain proteins are non-covalently anchored to the
            cell surface via a conserved mechanism involving wall
            polysaccharide pyruvylation
  JOURNAL   EMBO J 19 (17), 4473-4484 (2000)
   PUBMED   10970841
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012613.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00395.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..933
                     /organism="Bacillus cereus"
                     /db_xref="taxon:1396"
     Protein         1..933
                     /product="S-layer homology domain-containing protein"
                     /calculated_mol_wt=104844
     Region          37..76
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          96..136
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          154..194
                     /region_name="SLH"
                     /note="S-layer homology domain; pfam00395"
                     /db_xref="CDD:459798"
     Region          <214..320
                     /region_name="COG5263"
                     /note="Glucan-binding domain (YG repeat) [Carbohydrate
                     transport and metabolism]"
                     /db_xref="CDD:444077"
ORIGIN      
        1 mntikklfls svicillfst vgtayaeqng qvnsssfidv pkthwaykem mymaenkiit
       61 gygngyfgat dpiirehlaa flyrylkpqd stnnpfvdig dsnfkkeila ltargifsvn
      121 vekqfnpknn mtraemaavl vrtfdlkpkg nfdftdmkgh waneyvkila gnkitngtgd
      181 gkfnpnglvt reqfsvflyr timatssikn nesvgwvvdg ekkyyydkpg vkhtgllrsg
      241 ddtylfdkng nlasgwntvd gkdyyfdtvs gaaqkgwfsq tthwyyaddn gviqkgdvty
      301 kgkqfqfdrt gkmvkgwiti qsldqniyks rtvvrgfdpi kvrkdeilev vgedgplwfk
      361 vnyngqtyvv qklfavvfdq slsnkidtir qdiadlktta nlvkiyserf kkaketknyd
      421 malvdssela aslsgfltti knsdmtnlvn kiyekeadpa ikekynstia tlemmnedfg
      481 kihklmllkd simvldkanq dsgniiqqiq ngknlaqqdk iklqnyandm taykkqlvew
      541 yadtltavtd ltvslidqts lywltindtf vepaekwvgt lpkdeiskfa dgvrdygqqv
      601 tamhegfksr lpeykqmasd lrvvnqsfhk fgdsvqkaga slhkqavmad glinsvsthv
      661 aeaqqafptl htdimsglda annmmdsank isgykidtsn vvknvgnmdg lttrlkdfgv
      721 ppekmkeyle eqkrtnelgs maldfipvvg qikqglqiyn grefftdrky epndyvwgtv
      781 stvvggtpkv igrvfgkyge leqkakdlgk vskvteeigw smprgggvid grkytehale
      841 rmapdtiqvr aeltkrarer aerngytfgs keymeelkkv dprgvtpsvv eetikhatkq
      901 pgnkpglwqy dgkdvrvvln dngdvvsvvp nks
//
LOCUS       WP_258132121             896 aa            linear   BCT 02-MAR-2025
DEFINITION  ATP-binding protein [Bacillus cereus].
ACCESSION   WP_258132121
VERSION     WP_258132121.1
KEYWORDS    RefSeq.
SOURCE      Bacillus cereus
  ORGANISM  Bacillus cereus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 896)
  AUTHORS   Immormino,R.M., Dollins,D.E., Shaffer,P.L., Soldano,K.L.,
            Walker,M.A. and Gewirth,D.T.
  TITLE     Ligand-induced conformational shift in the N-terminal domain of
            GRP94, an Hsp90 chaperone
  JOURNAL   J Biol Chem 279 (44), 46162-46171 (2004)
   PUBMED   15292259
REFERENCE   2  (residues 1 to 896)
  AUTHORS   Song,Y., Peisach,D., Pioszak,A.A., Xu,Z. and Ninfa,A.J.
  TITLE     Crystal structure of the C-terminal domain of the two-component
            system transmitter protein nitrogen regulator II (NRII; NtrB),
            regulator of nitrogen assimilation in Escherichia coli
  JOURNAL   Biochemistry 43 (21), 6670-6678 (2004)
   PUBMED   15157101
REFERENCE   3  (residues 1 to 896)
  AUTHORS   Wright,L., Barril,X., Dymock,B., Sheridan,L., Surgenor,A.,
            Beswick,M., Drysdale,M., Collier,A., Massey,A., Davies,N., Fink,A.,
            Fromont,C., Aherne,W., Boxall,K., Sharp,S., Workman,P. and
            Hubbard,R.E.
  TITLE     Structure-activity relationships in purine-based inhibitor binding
            to HSP90 isoforms
  JOURNAL   Chem Biol 11 (6), 775-785 (2004)
   PUBMED   15217611
REFERENCE   4  (residues 1 to 896)
  AUTHORS   Roe,S.M., Ali,M.M., Meyer,P., Vaughan,C.K., Panaretou,B.,
            Piper,P.W., Prodromou,C. and Pearl,L.H.
  TITLE     The Mechanism of Hsp90 regulation by the protein kinase-specific
            cochaperone p50(cdc37)
  JOURNAL   Cell 116 (1), 87-98 (2004)
   PUBMED   14718169
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014567.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02518.31
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..896
                     /organism="Bacillus cereus"
                     /db_xref="taxon:1396"
     Protein         1..896
                     /product="ATP-binding protein"
                     /calculated_mol_wt=101499
     Region          46..172
                     /region_name="CHASE3"
                     /note="CHASE3 domain; pfam05227"
                     /db_xref="CDD:428379"
     Region          207..252
                     /region_name="HAMP"
                     /note="Histidine kinase, Adenylyl cyclase,
                     Methyl-accepting protein, and Phosphatase (HAMP) domain;
                     cd06225"
                     /db_xref="CDD:381743"
     Region          273..411
                     /region_name="GAF_2"
                     /note="GAF domain; pfam13185"
                     /db_xref="CDD:433019"
     Region          390..731
                     /region_name="BaeS"
                     /note="Signal transduction histidine kinase [Signal
                     transduction mechanisms]; COG0642"
                     /db_xref="CDD:440407"
     Region          776..894
                     /region_name="CheY"
                     /note="CheY-like REC (receiver) domain, includes
                     chemotaxis protein CheY and sporulation regulator Spo0F
                     [Signal transduction mechanisms]; COG0784"
                     /db_xref="CDD:440547"
ORIGIN      
        1 mnskakfsir ykimagylvi ilfllvsfim lnneisnlqk srnfiidhdf kvlnltnqve
       61 kelltienka kgfiisnnpn yvqslnsaek dyekhyqdlf sllednpsqq eklkqineni
      121 tswinkeihp litnnnsnnv qtidttqiqs lqsqvtnfrs teeqltkkra aqldtennkl
      181 eiwlysllfl lscisiiisl yisnsitkti knviqaiksi sskekiteri hvntrdeikd
      241 lahttnhlld eiskrewlqt elaelilmyq gvssiemlgk kilsgiiqkt qtscgafyvr
      301 eeyeetvyyv kkasfadqga digkqsiqmg egfigqsale kksfilrdip eefryvtsgv
      361 leirpknlli ipilfedkvi avmelvsvte isdlhqdliq qtvdnlglti hsimgrmriq
      421 tllhesqamt eelqvqseel qtqaeelqmq aeelrttneq lesrteeaeq ktadlqitks
      481 eleekasell rsskyksefl anmshelrtp lnsilllsem lrenhdnhls ddeielatvi
      541 hssgkdlltl indildlskv eagkldiife atnisdmaan mhqnflhiaa qknveftied
      601 sdtipdlfyt dakrieqiik nllsnafkft ekgsvslhfd siettnlshd mqsiskdwit
      661 isvkdtgigi akeqhqlife afqqadgati rkyggtglgl sickefarll ggwitlesnv
      721 gegstftayi pnlpnglhdi qlpnlevaat iedvipaevv eetivttetn nvfqeknili
      781 vdddhrnifa lqnalkkqna niitaqngie cleilksntn idlilmdimm pnmdgyetme
      841 nirmnlglhe ipiialtaka mpndkekcls agasdyiskp lnlhqlysvm svwlik
//
LOCUS       WP_258132253             523 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Microbacterium sp. MYb62].
ACCESSION   WP_258132253
VERSION     WP_258132253.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb62
  ORGANISM  Microbacterium sp. MYb62
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Microbacterium sp. MYb62"
                     /db_xref="taxon:1848690"
     Protein         1..523
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=54681
     Region          21..>174
                     /region_name="MFS_MMR_MDR_like"
                     /note="Methylenomycin A resistance protein (also called
                     MMR peptide) and similar multidrug resistance (MDR)
                     transporters of the Major Facilitator Superfamily;
                     cd17321"
                     /db_xref="CDD:340879"
     Region          40..>310
                     /region_name="PRK14995"
                     /note="SmvA family efflux MFS transporter"
                     /db_xref="CDD:184957"
ORIGIN      
        1 mstptakegs arlavgvllv tcistlvvna ntsavtillp aisadtgmsv dtlqwavtgy
       61 sligaativt sgalgdvfgr rrlfliglal fiascvmial aqdglmviag rciqgasgat
      121 ilacgmslia aahtktaqlr avtlwgaasa igaavgplvg gvlasttgwq glfwidaaia
      181 aacipltlas vkesrdpart rsidfagtvl iavilapvif altngstwgw asfatigcfa
      241 lsaaavvafv lveqrvkapl ldlqllrnpv lvgatiaill gsgtinaimy vvslyfqdpv
      301 alglsplqag latlpvaaaa vvlaplipsr gphrrarhhr prihhhdrvl rpagscerlv
      361 glralrastr rrrggheppe rtgildlhve rpgqpdrrrf ghlehgplrr sgsddgdrrl
      421 gvflgrrear grrragrgca ggrpvvvvdl dghlvcprdr tlaahgtpph rrtdrggsrc
      481 ggrehrphdr dpghagrrra raadgvtlth pgqtspgrsf apa
//
LOCUS       WP_258132276             265 aa            linear   BCT 02-MAR-2025
DEFINITION  TrmH family RNA methyltransferase [Microbacterium sp. MYb62].
ACCESSION   WP_258132276
VERSION     WP_258132276.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb62
  ORGANISM  Microbacterium sp. MYb62
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 265)
  AUTHORS   Persson,B.C., Jager,G. and Gustafsson,C.
  TITLE     The spoU gene of Escherichia coli, the fourth gene of the spoT
            operon, is essential for tRNA (Gm18) 2'-O-methyltransferase
            activity
  JOURNAL   Nucleic Acids Res 25 (20), 4093-4097 (1997)
   PUBMED   9321663
REFERENCE   2  (residues 1 to 265)
  AUTHORS   Koonin,E.V. and Rudd,K.E.
  TITLE     SpoU protein of Escherichia coli belongs to a new family of
            putative rRNA methylases
  JOURNAL   Nucleic Acids Res 21 (23), 5519 (1993)
   PUBMED   8265370
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012797.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00588.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Microbacterium sp. MYb62"
                     /db_xref="taxon:1848690"
     Protein         1..265
                     /product="TrmH family RNA methyltransferase"
                     /GO_function="GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_function="GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006396 - RNA processing [Evidence IEA]"
                     /calculated_mol_wt=28353
     Region          <4..>81
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          121..259
                     /region_name="SPOUT_MTase"
                     /note="SPOUT superfamily of SAM-dependent RNA
                     methyltransferases; cl38912"
                     /db_xref="CDD:476814"
     Site            order(194..196,216..219,235..237,246,248,251)
                     /site_type="other"
                     /note="SAM binding site [chemical binding]"
                     /db_xref="CDD:349969"
ORIGIN      
        1 mddaapespn peapaasrsl rpeapaasrs pnpeapaasr slgpattspa atgpaatgpg
       61 sstqpgygvg pwpggedawp egdqydrell avgdtrnvid ryrywrmeai vadldtqrhp
      121 fhvaienwqh dmnigsivrs anafladtvh iigrrrwnkr gamvtdryqh vvhhedveaf
      181 aawadaeglp iiavdnvdga vpvdkadlpq rcvllfgqeg pglsaealaa asahieitqy
      241 gstrsinasa aaavimyewc rryar
//
LOCUS       WP_258132303             226 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase domain-containing protein [Microbacterium sp.
            MYb62].
ACCESSION   WP_258132303
VERSION     WP_258132303.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb62
  ORGANISM  Microbacterium sp. MYb62
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025033.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13649.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Microbacterium sp. MYb62"
                     /db_xref="taxon:1848690"
     Protein         1..226
                     /product="methyltransferase domain-containing protein"
                     /calculated_mol_wt=24712
     Region          1..221
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(51..57,79..80,102,103,120)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
ORIGIN      
        1 mddphadarl lartygrfgl vnalvsrpgm lyrrdirpra dragrlrild vgagggdlcr
       61 llaqrlrrdg leaditalda ddrairwasa hdrgagiryr raltsdlvaa getfdvvlsn
      121 hvlhhlddae lqvvlgdsvr lvapgglvsh hdiarsrtah alfavatwpi sgtlladsfi
      181 redglisirr sytvselati apagwlvrgg vparlelrwe rdrarp
//
LOCUS       WP_258132307             196 aa            linear   BCT 02-MAR-2025
DEFINITION  2'-5' RNA ligase family protein [Microbacterium sp. MYb62].
ACCESSION   WP_258132307
VERSION     WP_258132307.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb62
  ORGANISM  Microbacterium sp. MYb62
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024952.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13563.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Microbacterium sp. MYb62"
                     /db_xref="taxon:1848690"
     Protein         1..196
                     /product="2'-5' RNA ligase family protein"
                     /calculated_mol_wt=21816
     Region          42..185
                     /region_name="2_5_RNA_ligase2"
                     /note="2'-5' RNA ligase superfamily; cl38987"
                     /db_xref="CDD:453916"
ORIGIN      
        1 mrrpfmdtpe qlasldgqqy lvlrptasva asyrqvqdaa ltrlgtplrh phtehvtlrg
       61 ffeperrdel talirewaar qppidlvaea vdefaapwqi livrlarsas lvsayatlta
      121 aldptdfrrl gelslddwtf hlsvlygktl aaadwtsfar aesrplspqp tevvteaelv
      181 wyqdgiehae ilplgg
//
LOCUS       WP_258132355             406 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 N-terminal domain-containing protein
            [Microbacterium sp. MYb62].
ACCESSION   WP_258132355
VERSION     WP_258132355.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb62
  ORGANISM  Microbacterium sp. MYb62
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 406)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013126.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00933.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Microbacterium sp. MYb62"
                     /db_xref="taxon:1848690"
     Protein         1..406
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=40548
     Region          97..385
                     /region_name="Glyco_hydro_3"
                     /note="Glycosyl hydrolase family 3 N terminal domain;
                     cl29895"
                     /db_xref="CDD:421946"
ORIGIN      
        1 msrhrgwaag alavaalstl cipsvasast atantassva psaadavvss tadptgpaeh
       61 atalvgemtv aaqaatvvmg hvagtdpaal raymesglgg filmganipe seselqalts
      121 altvdpalpp liavdqeggl vsrlhddgyp sstslkglpv adtssaflar gsvvaragit
      181 vnfgtvadft gdpgtfiygr algtdaasaa ervsaattaq erfvastlkh fpghgaapgd
      241 shhaipstam gleewratea vpfaagidag asllmyghla ytavdplpas lsptwheiar
      301 delgfegvav tddlgmllss gdpayadpva ngvaaiaagn dlvlmiagsd artagdmavg
      361 iasaveagtl saerleeaat rvmtlrvqla gdtadwqvca dcepvd
//
LOCUS       WP_258132386             177 aa            linear   BCT 02-MAR-2025
DEFINITION  transcription termination/antitermination NusG family protein
            [Escherichia coli].
ACCESSION   WP_258132386
VERSION     WP_258132386.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014417.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02357.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..177
                     /product="transcription termination/antitermination NusG
                     family protein"
                     /GO_process="GO:0006354 - DNA-templated transcription
                     elongation [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /GO_process="GO:0140673 - transcription elongation-coupled
                     chromatin remodeling [Evidence IEA]"
                     /calculated_mol_wt=20625
     Region          9..110
                     /region_name="NGN"
                     /note="N-Utilization Substance G (NusG) N-terminal (NGN)
                     domain Superfamily; cl02766"
                     /db_xref="CDD:445911"
ORIGIN      
        1 mniehlnnrn wylaqyntag knreslfswl neqnvvpwtp litrkirrad srccyrerif
       61 aifpgyffil anfdiqpvsa lrrhrafidf vkfggeikpv nkdivdglmk iypdpvlnpg
      121 areelnaass iwltkaqyqy llrmentlqp esrislllel vsnaehhgfm erlvnip
//
LOCUS       WP_258132481             705 aa            linear   BCT 02-MAR-2025
DEFINITION  HD domain-containing phosphohydrolase [Aliivibrio sifiae].
ACCESSION   WP_258132481
VERSION     WP_258132481.1
KEYWORDS    RefSeq.
SOURCE      Aliivibrio sifiae
  ORGANISM  Aliivibrio sifiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Aliivibrio.
REFERENCE   1  (residues 1 to 705)
  AUTHORS   Galperin,M.Y. and Chou,S.H.
  TITLE     Sequence Conservation, Domain Architectures, and Phylogenetic
            Distribution of the HD-GYP Type c-di-GMP Phosphodiesterases
  JOURNAL   J Bacteriol 204 (4), e0056121 (2022)
   PUBMED   34928179
REFERENCE   2  (residues 1 to 705)
  AUTHORS   Aravind,L. and Koonin,E.V.
  TITLE     The HD domain defines a new superfamily of metal-dependent
            phosphohydrolases
  JOURNAL   Trends Biochem Sci 23 (12), 469-472 (1998)
   PUBMED   9868367
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024878.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13487.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Aliivibrio sifiae"
                     /db_xref="taxon:566293"
     Protein         1..705
                     /product="HD domain-containing phosphohydrolase"
                     /calculated_mol_wt=82201
     Region          50..243
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Region          263..467
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
     Region          385..702
                     /region_name="HDGYP"
                     /note="HD-GYP domain, c-di-GMP phosphodiesterase class II
                     (or its inactivated variant) [Signal transduction
                     mechanisms]; COG2206"
                     /db_xref="CDD:441808"
ORIGIN      
        1 mkrifvfily iyssflwsid ltkeegtwlk nnnnfifynd dydsrllfie ngetkglykn
       61 liddinkklg tyftiyvedv dllhnkfknl dsgayfdfan tkerrenyff vptlyrvstk
      121 vffkdtknik dlvslnhkki gliddwystt nfvnqyegei hyipvkyknl neltsalqvg
      181 didafvadtq vitdkayptl slprlenlyt sfaiskehse lyailikyft eltseevkem
      241 vkksredyfi ylfkkseelk gleisvgygf nefptsylin nqyhgiaptl fdsiklifkd
      301 vvnfteptlg dcndydills afenkcitdn yfltkpyysf elsvfnkleg nfisriadvn
      361 ystvgmlkna yyydyvknnt rnvkmvffdt fneiikavnd grvdyafgdq rlllnhtinh
      421 dmydlktagt ltekvsvyia vkkeyealfd sinlisissd nerlikniyi nenekyqrnd
      481 lwllisilsg slfiislllv rdfiakkaqa rlltmnesli gslemaslys deetsehnkr
      541 intysehlsk llnmpkpfve dirmiaslhd igkigiphyi lkkpgkldpd efdvmkqhvn
      601 igyeiiknte lstitknivl yhhekwngkg ylhlagkdip iearivsivd vydalrqkrv
      661 ykegftheva ieiiaeergv sfdpiivdlf lhhheefrai fennq
//
LOCUS       WP_258132522             471 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MFS transporter [unclassified Microbacterium].
ACCESSION   WP_258132522
VERSION     WP_258132522.1
KEYWORDS    RefSeq.
SOURCE      unclassified Microbacterium
  ORGANISM  unclassified Microbacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="unclassified Microbacterium"
                     /db_xref="taxon:2609290"
     Protein         1..471
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=48251
     Region          30..463
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(37..38,41..42,45,77,127..128,130..132,135,154,
                     157..158,161,286,289..290,293..295,298,331,335,385..386,
                     390,394,411,414)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:341047"
ORIGIN      
        1 mhthaptasp gapvrepvrg aravglvatl ilgvlsyqln asmitpalpd iaaqlgedig
       61 rvsqvsslff vagavggvvl grwsdfigrk ralfivlgil slgtllcifa pnltvlligr
      121 vlqgassaaf qlayvilses lsakvfgttl giitavnggv ggvdgyiggl lseafgfrsi
      181 fvvifivgli aivcvarvip atqvsassgk mdwwgaavls ialicvtyfv ssgpsagwla
      241 pvtllflaga vaslvafwvv ekrratplia vehlrsrqvw pvlattvltl ssvfavinft
      301 vvllsqdgth gfgldaataa llflappali gvfaapmsgw lagrrgwipv lrvgmiaclv
      361 llvviallpq sfwvvfamia llgityngiv lttinglgvv qspaeapaal pglngsafgi
      421 gaglgigiva pfaaqgtpgg yvtalwisvg italalitsf lirprvpvda s
//
LOCUS       WP_258132524            2013 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein [Microbacterium sp. MYb72].
ACCESSION   WP_258132524
VERSION     WP_258132524.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb72
  ORGANISM  Microbacterium sp. MYb72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 2013)
  AUTHORS   Clarke,T.A., Edwards,M.J., Gates,A.J., Hall,A., White,G.F.,
            Bradley,J., Reardon,C.L., Shi,L., Beliaev,A.S., Marshall,M.J.,
            Wang,Z., Watmough,N.J., Fredrickson,J.K., Zachara,J.M., Butt,J.N.
            and Richardson,D.J.
  TITLE     Structure of a bacterial cell surface decaheme electron conduit
  JOURNAL   Proc Natl Acad Sci U S A 108 (23), 9384-9389 (2011)
   PUBMED   21606337
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037016.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17963.7
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2013
                     /organism="Microbacterium sp. MYb72"
                     /db_xref="taxon:1848693"
     Protein         1..2013
                     /product="Ig-like domain-containing protein"
                     /calculated_mol_wt=209725
     Region          <373..579
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
     Region          390..444
                     /region_name="Cadherin_4"
                     /note="Bacterial cadherin-like domain; pfam17803"
                     /db_xref="CDD:465514"
     Region          861..949
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
     Region          956..1051
                     /region_name="Big_9"
                     /note="Bacterial Ig domain; pfam17963"
                     /db_xref="CDD:465590"
     Region          <1230..1388
                     /region_name="myxo_dep_M36"
                     /note="myxosortase-dependent M36 family metallopeptidase;
                     NF038112"
                     /db_xref="CDD:468355"
     Region          1324..1890
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          1459..1543
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(1459,1518,1533)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(1534..1535,1537..1538)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
ORIGIN      
        1 mrarpktlas aagvaaaaia ittlafaydg npttkvelnd ggvwitktss llvghfnhes
       61 tvldgglrtt genydilqde snvlvvdrgs stltavdpar valgdssgip ssakvvlgnk
      121 taaildpksg nlwviavrai agfkieavdp taelgdgadv avaddgtvfg lsaargevvt
      181 ipvdnegepl dpseasvgdi dtdeaptita vgrtavvlda atgvvmtpgg frteipdaad
      241 avlqqssaaa dsvaiatpsa llsvpldgsd ptetavdgtg npavpvslrg cfygawagsa
      301 rfvrdcpgda ddveakidga edaasltfrv nrdviilnda vggaawmade slqrvdnwnd
      361 ltppegeaen eedttqetve ttlpdrkeen tppvaeddsf gvrpgasill pvldndndpd
      421 gdvlvaalae qqpsigtvqp iqnggslqia vdekatgsat ftyeaddgrk gkdtaavtls
      481 vhdwdvngap apkrktsltv esggtvsyni lpdwidpdgd diylkavaaa pgdevdfstd
      541 gqitykatas lqgrkdieva vadgsgevgt asitidvrpp gttdpktnad hvvtrvgeqv
      601 tvapltndts ssreplrlgr vdevpgatvi pdftnktftf sadapgtyyv qylatagpkn
      661 geglvrvdvl eagasdlapv avrdvallps ggdvligvla ndedpgggil vvqsvsmeps
      721 sgvsvsvinh etlritdqgs ltgqarityt isngsksaeg evvvipipap dtimqpvanp
      781 dtvtvragdv vtipvldndt hpnddvmhva peliepfvdp ddgeafvsqd tvrfkagpea
      841 ktvyltyeav dsrqqkaagy vtiqilpvde dtnaaprprd lvaralagte isiavpldgi
      901 dadgdsvell diassptkgr inetganyft yeaftgssgv dtfkyrvrdh lgkegiatir
      961 vgiappeqvn qdpyavkdav vvrpgreiav pvlandsdpe gdeitlvsek ngglevpkel
     1021 earvsgdrvl vqapdrslet slqytirdar gatasailqv tvdedvplqa pvarddrvrp
     1081 ddlkdgglta dieiltnded pdgttdsldl dlgagatalq ngkvrvtvtd eqqlirytlt
     1141 dqdglqasaf ifvpavsglr ptidstkpvq vvsgetislp lskyvtvagg gtaritehak
     1201 vsavhadgad lvkdestlvy tsaagyfgqd aitfevtdgt gpddpegrka tltipidvlp
     1261 penqqptfvs gqvqvapgek dtaldlaalt tdpdpedeht fafvggdgkg vtakvdgdkl
     1321 lveaassakk gtaltldvri sdgetepveg tvsvivaast ralpaantdt vgqadqgksv
     1381 tvpvlandfn pfpetpleiv syvvesgsgd vskkgdelvv tpsanfvgtm vvryrikdat
     1441 ddpdreangq vvvtvqgvpe apgaptvtsv qdrtvvisfa apsnngaeit kytvtsaqgs
     1501 syrkecqstt ctldgltnnv eytfrvtatn rvgegkpsgt sevarpdarp dtpnppslkf
     1561 gdkslqvnwv tpstpgspve rytleispap psgiaqkevt gnsitwegle ngsnyqvrvq
     1621 ahnkapepss wsgwsaseip agppfapaap ttteipsvgd qaqmqvnwaa pnsngdaidg
     1681 yqleiyegst lrrtvtpgag atsqavtlpt setaytfrik atnkagwgey spmsaprrgv
     1741 napgaptglt aephdksivi aytpgsrnga rtgevsyqyr lnggtwqals gptisgltng
     1801 ttykvevrgv atvdgstysg apsnaasavp ygvpfapkat aknlgtqvql nwdasgsgng
     1861 rkidvvqisv dgggwqnvav sgsrtvgggy kethsikvra qdsagqwspe asdsartndp
     1921 paevlktekg asgswpdcgs sscakvrltv anfnspgnyh lqcddgnkwg ggtlsyvpan
     1981 gsvdlncyyg fpgntirvyi keldryatam vwy
//
LOCUS       WP_258132525             674 aa            linear   BCT 02-MAR-2025
DEFINITION  aldehyde dehydrogenase family protein [Microbacterium sp. MYb72].
ACCESSION   WP_258132525
VERSION     WP_258132525.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb72
  ORGANISM  Microbacterium sp. MYb72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 674)
  AUTHORS   Steinmetz,C.G., Xie,P., Weiner,H. and Hurley,T.D.
  TITLE     Structure of mitochondrial aldehyde dehydrogenase: the genetic
            component of ethanol aversion
  JOURNAL   Structure 5 (5), 701-711 (1997)
   PUBMED   9195888
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012398.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00171.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Microbacterium sp. MYb72"
                     /db_xref="taxon:1848693"
     Protein         1..674
                     /product="aldehyde dehydrogenase family protein"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=70185
     Region          <4..>105
                     /region_name="PRK10905"
                     /note="cell division protein DamX; Validated"
                     /db_xref="CDD:236792"
     Region          225..586
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     Site            order(270..274,281,297,300..301,346..349,352,355..356,
                     382..384,420,497,499,545,578)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143395"
     Site            order(274,382,417,420)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143395"
ORIGIN      
        1 mtsatspsad esasstprpa kkassgakap ktapatpkrp daaqtakapa sarpktaaaa
       61 akspggtkta kapasarqks seaastapat akssgttasa salpaldege rtrldsaigd
      121 lqtgasiwsa ltlsqrvtll ravrtsvaat aedwadtaaa skgldgrhpl rgeewlsgpy
      181 svlgaldayi etlsrladgt npldgvkidr apggrtrvht fpltgidrfl lsgftgevwl
      241 epgitpngar aaaglaqrtp tasggvelvl gagnitsipv ldvlyellah nrtallkvnp
      301 tqdalvpvyk rafapliepg flrivrggpa vgayltghpd lvhvhitgsa atfdaivwgt
      361 gaaatrrrre nrpqlkkpit aelggvspii vvpgawsddd lryqaehvat mrlqngghnc
      421 iagqvvilss dwaqadrfra elrrayanap erpiwypgsp srmqqatday pdalvlgdrl
      481 lveigdgddp dalqhteyfa pvlgvvtvpg egqsfldaav syandelqgt lganllidpa
      541 tekslgsgfe raianlrygs iaingwtafg fitptltwga fpgstiddvg sgigivhnal
      601 lldgversvi rgpfrpfprs lpvvngggrl tilpkppwfv sartgaevse gltrfrvngs
      661 taglvktllk alra
//
LOCUS       WP_258132580             347 aa            linear   BCT 02-MAR-2025
DEFINITION  HAMP domain-containing protein [Aliivibrio sifiae].
ACCESSION   WP_258132580
VERSION     WP_258132580.1
KEYWORDS    RefSeq.
SOURCE      Aliivibrio sifiae
  ORGANISM  Aliivibrio sifiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Aliivibrio.
REFERENCE   1  (residues 1 to 347)
  AUTHORS   Aravind,L. and Ponting,C.P.
  TITLE     The cytoplasmic helical linker domain of receptor histidine kinase
            and methyl-accepting proteins is common to many prokaryotic
            signalling proteins
  JOURNAL   FEMS Microbiol Lett 176 (1), 111-116 (1999)
   PUBMED   10418137
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012876.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00672.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Aliivibrio sifiae"
                     /db_xref="taxon:566293"
     Protein         1..347
                     /product="HAMP domain-containing protein"
                     /GO_component="GO:0016020 - membrane [Evidence IEA]"
                     /GO_process="GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /calculated_mol_wt=40416
     Region          <275..>345
                     /region_name="NarQ"
                     /note="Signal transduction histidine kinase NarQ,
                     nitrate/nitrite-specific [Signal transduction mechanisms];
                     COG3850"
                     /db_xref="CDD:443059"
ORIGIN      
        1 mllknkffva ltgtitiysi lisvatyqii ainekeitsv ttnvenkyih rnvshyandm
       61 snhlnvklke ieriskkyat mlkknsrnie yvlnksneel rnyststylm ndkiifnnkn
      121 dkftikqykv sngsyltfkt nitrlvysis esqtrndfis liidqdmnvv tknkkaqqyl
      181 seykeklsdi tkieeltfne mitmrnistk kawdseirlg kelyivatqp innypwnvav
      241 likkktaksy seeitnkihs nsnefikkii ssiimltift lfistlitny ikgplilfsq
      301 wireiqngny eynnpllyrk delgtlarnv slmaqhistl vydlekk
//
LOCUS       WP_258132058             261 aa            linear   BCT 02-MAR-2025
DEFINITION  glycine-rich protein [Bacillus cereus].
ACCESSION   WP_258132058
VERSION     WP_258132058.1
KEYWORDS    RefSeq.
SOURCE      Bacillus cereus
  ORGANISM  Bacillus cereus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 261)
  AUTHORS   Li,T., Stayrook,S.E., Tsutsui,Y., Zhang,J., Wang,Y., Li,H.,
            Proffitt,A., Krimmer,S.G., Ahmed,M., Belliveau,O., Walker,I.X.,
            Mudumbi,K.C., Suzuki,Y., Lax,I., Alvarado,D., Lemmon,M.A.,
            Schlessinger,J. and Klein,D.E.
  TITLE     Structural basis for ligand reception by anaplastic lymphoma kinase
  JOURNAL   Nature 600 (7887), 148-152 (2021)
   PUBMED   34819665
REFERENCE   2  (residues 1 to 261)
  AUTHORS   De Munck,S., Provost,M., Kurikawa,M., Omori,I., Mukohyama,J.,
            Felix,J., Bloch,Y., Abdel-Wahab,O., Bazan,J.F., Yoshimi,A. and
            Savvides,S.N.
  TITLE     Structural basis of cytokine-mediated activation of ALK family
            receptors
  JOURNAL   Nature 600 (7887), 143-147 (2021)
   PUBMED   34646012
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024220.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12810.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Bacillus cereus"
                     /db_xref="taxon:1396"
     Protein         1..261
                     /product="glycine-rich protein"
                     /calculated_mol_wt=25234
ORIGIN      
        1 mtrtwtfnyt gkmetyippv tgiytvevqg aqggnsssgg vgglgalvsg dftleggkpi
       61 yvfvggqgkp vesgsiaggf fgggdigsts gsaasgggas diriggfdls rrvivaaggg
      121 gggwqktkgg yggvrygang etwgssyhgg sgagptyggr asttsgaggw ktyptdgkig
      181 aggtgvgssg gggggggggg ggyyrggggs syntglnqsg kdnyrtgngl viitlksepn
      241 llliqdgdii ktykngawqs i
//
LOCUS       WP_258132475              94 aa            linear   BCT 02-MAR-2025
DEFINITION  GIY-YIG nuclease family protein [Microbacterium sp. MYb72].
ACCESSION   WP_258132475
VERSION     WP_258132475.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb72
  ORGANISM  Microbacterium sp. MYb72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 94)
  AUTHORS   Martin-Castellanos,C., Blanco,M., Rozalen,A.E., Perez-Hidalgo,L.,
            Garcia,A.I., Conde,F., Mata,J., Ellermeier,C., Davis,L.,
            San-Segundo,P., Smith,G.R. and Moreno,S.
  TITLE     A large-scale screen in S. pombe identifies seven novel genes
            required for critical meiotic events
  JOURNAL   Curr Biol 15 (22), 2056-2062 (2005)
   PUBMED   16303567
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024847.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13455.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Microbacterium sp. MYb72"
                     /db_xref="taxon:1848693"
     Protein         1..94
                     /product="GIY-YIG nuclease family protein"
                     /calculated_mol_wt=11165
     Region          14..73
                     /region_name="GIY-YIG_SF"
                     /note="GIY-YIG nuclease domain superfamily; cl15257"
                     /db_xref="CDD:472790"
ORIGIN      
        1 mievvyylry drrvkigtsr rprqrlasir hdellafeqg graleqqrhr efalvregge
       61 wftltdevra hiaalrerge pwtlyarwls dalr
//
LOCUS       WP_258132080             423 aa            linear   BCT 02-MAR-2025
DEFINITION  glycine-rich protein [Bacillus cereus].
ACCESSION   WP_258132080
VERSION     WP_258132080.1
KEYWORDS    RefSeq.
SOURCE      Bacillus cereus
  ORGANISM  Bacillus cereus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (residues 1 to 423)
  AUTHORS   Li,T., Stayrook,S.E., Tsutsui,Y., Zhang,J., Wang,Y., Li,H.,
            Proffitt,A., Krimmer,S.G., Ahmed,M., Belliveau,O., Walker,I.X.,
            Mudumbi,K.C., Suzuki,Y., Lax,I., Alvarado,D., Lemmon,M.A.,
            Schlessinger,J. and Klein,D.E.
  TITLE     Structural basis for ligand reception by anaplastic lymphoma kinase
  JOURNAL   Nature 600 (7887), 148-152 (2021)
   PUBMED   34819665
REFERENCE   2  (residues 1 to 423)
  AUTHORS   De Munck,S., Provost,M., Kurikawa,M., Omori,I., Mukohyama,J.,
            Felix,J., Bloch,Y., Abdel-Wahab,O., Bazan,J.F., Yoshimi,A. and
            Savvides,S.N.
  TITLE     Structural basis of cytokine-mediated activation of ALK family
            receptors
  JOURNAL   Nature 600 (7887), 143-147 (2021)
   PUBMED   34646012
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024220.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12810.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Bacillus cereus"
                     /db_xref="taxon:1396"
     Protein         1..423
                     /product="glycine-rich protein"
                     /calculated_mol_wt=43523
ORIGIN      
        1 maitmtlkiy sfttagaygn rgptqdqiea aykgtnlegk vsssngvqyw tvpltgmydi
       61 eagggrggtn pgtttpmggf garikgsfhl nagqvlriiv gqkgtdggtg efaaggggas
      121 vvsikdadsp mivaggggga stnniafspe pgdstnkgdm pgysgigyng sfpshfgggg
      181 aswsfsgatd sgktlstsrg gkrlkgetpf ggdpvntsdq kyasvggfgg ggsggrnngs
      241 ggggggytgg nggrydtvpv kqqghgggsf nagenqsnir ggntsvytgy vtitiddnnn
      301 pptnpesfli qpetnsknls seiihlswtp stdededaiv ytvefyngtd wqtilsdlsq
      361 sfydfmlpii ntdnaqiris aidskgaksd flisnvfciq kqfilvqdnn tiktyqngnw
      421 ksi
//
LOCUS       WP_258132693             383 aa            linear   BCT 02-MAR-2025
DEFINITION  LysM peptidoglycan-binding domain-containing protein
            [Microbacterium sp. MYb72].
ACCESSION   WP_258132693
VERSION     WP_258132693.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb72
  ORGANISM  Microbacterium sp. MYb72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 383)
  AUTHORS   Bateman,A. and Bycroft,M.
  TITLE     The structure of a LysM domain from E. coli membrane-bound lytic
            murein transglycosylase D (MltD)
  JOURNAL   J Mol Biol 299 (4), 1113-1119 (2000)
   PUBMED   10843862
REFERENCE   2  (residues 1 to 383)
  AUTHORS   Joris,B., Englebert,S., Chu,C.P., Kariyama,R., Daneo-Moore,L.,
            Shockman,G.D. and Ghuysen,J.M.
  TITLE     Modular design of the Enterococcus hirae muramidase-2 and
            Streptococcus faecalis autolysin
  JOURNAL   FEMS Microbiol Lett 70 (3), 257-264 (1992)
   PUBMED   1352512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01476.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Microbacterium sp. MYb72"
                     /db_xref="taxon:1848693"
     Protein         1..383
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=39030
     Region          <57..249
                     /region_name="PRK06347"
                     /note="1,4-beta-N-acetylmuramoylhydrolase"
                     /db_xref="CDD:180536"
ORIGIN      
        1 mrpnsaarrm rylqlgvpaa vlgtlagtia aapasadass tqierlhlsg lrivpatasp
       61 tsyvvqpgdt vsaiaqqhgl rttdvlawng ltwrsviypg qtltltgaaa paspapsaav
      121 gqshlvvagd tvygiaqkyg ttvdavlaan gltrasviyp gqtlavtgal apaaapavva
      181 apaptggqay tvvagdtlsa iaqkygtsta nlyawnglgp gsiiypgqsi tvsappaaaa
      241 sgteqlsasl daeqtanaal ivrigrqlgv sdrgvaiala tamvesgmrn lsygdrdslg
      301 lfqqrpstgw gaaeqimdad rstrvfyggq sdpngqnsrg lldipgwdgm aftdaaqavq
      361 isayplrygq wesqayqwla hlg
//
LOCUS       WP_258132686             453 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: FAD-dependent oxidoreductase [Microbacterium].
ACCESSION   WP_258132686
VERSION     WP_258132686.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium
  ORGANISM  Microbacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae.
REFERENCE   1  (residues 1 to 453)
  AUTHORS   Tavladoraki,P., Schinina,M.E., Cecconi,F., Di Agostino,S.,
            Manera,F., Rea,G., Mariottini,P., Federico,R. and Angelini,R.
  TITLE     Maize polyamine oxidase: primary structure from protein and cDNA
            sequencing
  JOURNAL   FEBS Lett 426 (1), 62-66 (1998)
   PUBMED   9598979
REFERENCE   2  (residues 1 to 453)
  AUTHORS   Tsugeno,Y. and Ito,A.
  TITLE     A key amino acid responsible for substrate selectivity of monoamine
            oxidase A and B
  JOURNAL   J Biol Chem 272 (22), 14033-14036 (1997)
   PUBMED   9162023
REFERENCE   3  (residues 1 to 453)
  AUTHORS   Schilling,B. and Lerch,K.
  TITLE     Cloning, sequencing and heterologous expression of the monoamine
            oxidase gene from Aspergillus niger
  JOURNAL   Mol Gen Genet 247 (4), 430-438 (1995)
   PUBMED   7770050
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013739.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01593.30
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Microbacterium"
                     /db_xref="taxon:33882"
     Protein         1..453
                     /product="FAD-dependent oxidoreductase"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=45723
     Region          <46..112
                     /region_name="YobN"
                     /note="Monoamine oxidase [Amino acid transport and
                     metabolism]; COG1231"
                     /db_xref="CDD:440844"
     Region          142..>423
                     /region_name="YobN"
                     /note="Monoamine oxidase [Amino acid transport and
                     metabolism]; COG1231"
                     /db_xref="CDD:440844"
ORIGIN      
        1 mtrrtlliga gagvlgvlla sctpepvpsp tpdrspsprp tgstiaplaf arsrwasdpf
       61 algsasftpa gvqasardal aasvdgrlff ageatdadap gtmsgalrsg traaeellaa
      121 aeygeriaiv gaglagaaaa arlsgtgfel tvfdardrvg grvqsvvdek swpvpaqlgg
      181 wllgaqdadv seqlnaldir tgslsaslwk stegdvepva dqvltdaias aqalpadipl
      241 aqaltdagad paepglaall aslsassgsd adqasswfpp vippaertav lgdlgalaah
      301 llddvktsls spvsrvaydd agvslgiatg eslsfdrvvi tvplgvlqsd giefspklpf
      361 gqrgaiadls mgfietvwlr feepllvtda aiwhvvggda tirtwfnlap ltgenilvgl
      421 vggadaadfa dldddavlaa aaaslapfla pas
//
LOCUS       WP_258132681             335 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Aliivibrio sifiae].
ACCESSION   WP_258132681
VERSION     WP_258132681.1
KEYWORDS    RefSeq.
SOURCE      Aliivibrio sifiae
  ORGANISM  Aliivibrio sifiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Aliivibrio.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024118.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12706.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Aliivibrio sifiae"
                     /db_xref="taxon:566293"
     Protein         1..335
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=37771
     Region          75..256
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(130,132,134..135,204..205,225)
                     /site_type="active"
                     /db_xref="CDD:293792"
ORIGIN      
        1 maltfsyfqq gektkpvrfk nseteyttsa sniwdiakay isttrteatp kntvpvqtis
       61 idnlmqekea vlyrlghssv likldgklil tdpvfsdras pvqwagpkrf hqapisisdl
      121 ptiqvvaish dhydhldkha vkllndkveh fvvplrvgal lkkwgvaedk itefdwwqst
      181 tvsniefsla ptqhfsgrgl tdknstlwgs waikgeqanv ffsgdsgyfs gfkeigekyg
      241 pfdltmietg ayndlwsdih mfpsqsvqah ldvkgkammp ihnstfdlal hdwqdpleqv
      301 ttiseeknvk litpmigekv iitepkptsl wwrnm
//
LOCUS       WP_258132760             216 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: N-6 DNA methylase [unclassified Microbacterium].
ACCESSION   WP_258132760
VERSION     WP_258132760.1
KEYWORDS    RefSeq.
SOURCE      unclassified Microbacterium
  ORGANISM  unclassified Microbacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 216)
  AUTHORS   Schouler,C., Gautier,M., Ehrlich,S.D. and Chopin,M.C.
  TITLE     Combinational variation of restriction modification specificities
            in Lactococcus lactis
  JOURNAL   Mol Microbiol 28 (1), 169-178 (1998)
   PUBMED   9593305
REFERENCE   2  (residues 1 to 216)
  AUTHORS   Schouler,C., Clier,F., Lerayer,A.L., Ehrlich,S.D. and Chopin,M.C.
  TITLE     A type IC restriction-modification system in Lactococcus lactis
  JOURNAL   J Bacteriol 180 (2), 407-411 (1998)
   PUBMED   9440532
REFERENCE   3  (residues 1 to 216)
  AUTHORS   Thorpe,P.H., Ternent,D. and Murray,N.E.
  TITLE     The specificity of sty SKI, a type I restriction enzyme, implies a
            structure with rotational symmetry
  JOURNAL   Nucleic Acids Res 25 (9), 1694-1700 (1997)
   PUBMED   9108149
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02384.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="unclassified Microbacterium"
                     /db_xref="taxon:2609290"
     Protein         1..216
                     /product="N-6 DNA methylase"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_function="GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=24020
     Region          76..>194
                     /region_name="HsdM"
                     /note="Type I restriction-modification system, DNA
                     methylase subunit [Defense mechanisms]; COG0286"
                     /db_xref="CDD:440055"
ORIGIN      
        1 mkllrantge rdlhtvfgdf csmsasalrn rfdpnghder eeqyertrer yseaqwmrfa
       61 ealgavtiel aseprdvlge vymqleiasr dqgqfftpys vcrlmaalqv pdaaerlqtr
      121 pfltvyepac gagamviava qelasqgfdc stqlhvtadd islnavhmsy iqlsllqipa
      181 ivnhrnsltl ehfdtwptvt halggwdrtl stplag
//
LOCUS       WP_258132552             179 aa            linear   BCT 02-MAR-2025
DEFINITION  ribosomal protein L7/L12 [Microbacterium sp. MYb72].
ACCESSION   WP_258132552
VERSION     WP_258132552.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb72
  ORGANISM  Microbacterium sp. MYb72
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 179)
  AUTHORS   Leijonmarck,M. and Liljas,A.
  TITLE     Structure of the C-terminal domain of the ribosomal protein L7/L12
            from Escherichia coli at 1.7 A
  JOURNAL   J Mol Biol 195 (3), 555-579 (1987)
   PUBMED   3309338
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012752.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00542.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Microbacterium sp. MYb72"
                     /db_xref="taxon:1848693"
     Protein         1..179
                     /product="ribosomal protein L7/L12"
                     /GO_function="GO:0003735 - structural constituent of
                     ribosome [Evidence IEA]"
                     /GO_process="GO:0006412 - translation [Evidence IEA]"
                     /calculated_mol_wt=18595
     Region          <72..>100
                     /region_name="Ribosomal_L7_L12"
                     /note="Ribosomal protein L7/L12. Ribosomal protein L7/L12
                     refers to the large ribosomal subunit proteins L7 and L12,
                     which are identical except that L7 is acetylated at the N
                     terminus. It is a component of the L7/L12 stalk, which is
                     located at the surface of...; cl46846"
                     /db_xref="CDD:481186"
     Site            order(77..78,81..82,85,92..93,96)
                     /site_type="other"
                     /note="L11 interface [polypeptide binding]"
                     /db_xref="CDD:100102"
     Site            order(78,82,85,92..93,96)
                     /site_type="other"
                     /note="putative EF-Tu interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:100102"
     Site            order(78,81..82,85)
                     /site_type="other"
                     /note="putative EF-G interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:100102"
     Region          146..>174
                     /region_name="Ribosomal_L7_L12"
                     /note="Ribosomal protein L7/L12. Ribosomal protein L7/L12
                     refers to the large ribosomal subunit proteins L7 and L12,
                     which are identical except that L7 is acetylated at the N
                     terminus. It is a component of the L7/L12 stalk, which is
                     located at the surface of...; cl46846"
                     /db_xref="CDD:481186"
     Site            order(150..151,154..155,158,165..166,169)
                     /site_type="other"
                     /note="L11 interface [polypeptide binding]"
                     /db_xref="CDD:100102"
     Site            order(151,155,158,165..166,169)
                     /site_type="other"
                     /note="putative EF-Tu interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:100102"
     Site            order(151,154..155,158)
                     /site_type="other"
                     /note="putative EF-G interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:100102"
ORIGIN      
        1 mdsiivvivv aavvvvgivi vaaalrgmrp kepeaqvyrp spttartapa tssmsptsgl
       61 tprvvadidr lvasdqkiqa iklyrqstgv glkeakdrid hwsisttaph aaavshanaa
      121 rtsitpssir aslpapvaad idrlvaegak itaikalreh tgvglkeakd aieawtpgr
//
LOCUS       WP_258132804            1093 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5107 domain-containing protein [Escherichia coli].
ACCESSION   WP_258132804
VERSION     WP_258132804.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028438.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17128.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..1093
                     /product="DUF5107 domain-containing protein"
                     /calculated_mol_wt=123787
     Region          40..343
                     /region_name="DUF5107"
                     /note="Domain of unknown function (DUF5107); pfam17128"
                     /db_xref="CDD:407262"
     Region          468..702
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          495..523
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(496,499..500,503..504,506,536,539..540,543..544,
                     546..547,570,573..574,577..578,581)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          534..564
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          569..597
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          618..>816
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          746..772
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          749..>961
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          777..808
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mtpvkvwqer veiptyetgp qdihpmflen rvyqgssgav ypygvtdtls eqktlkswqa
       61 vwlendyikv milpelggrv hrawdkvkqr dfvyhnevik palvgllgpw isggiefnwp
      121 qhhrpttfmp vdftleahed gaqtvwvget epmhglqvmt gftlrpdraa leiasrvyng
      181 natprhflww anpavkggeg hqsvfppdvt avfdhgkrav safpiatgty ykvdysagvd
      241 isryknvpvp tsymaeksqy dfvgawchde dggllhvanh hiapgkkqws wghsefgqaw
      301 dksltdnngp yielmtgifa dnqpdftwld ayeekrfeqy flpyhslgmv qnasrdavik
      361 lqrsergiew glyaisplng yrlaireigk cnallddava lmpataiqgv lhginperlt
      421 ielsdadgni vlsyqehqpq elplpdvaka plsaqditst deawfigqhl eqyhhasrsp
      481 fdyylrgval dpldyrcnla lamleynrad fpqavayatq alkrahalnk npqcgqasli
      541 rasayerqgq yqqaeedfwr avwsgnskag gyyglarlaa rngnfdagld fcqqslracp
      601 tnqevlclhn lllvlsgrqd narlqrakll rdyplnatlw wlnwfdgrse salaqwrglc
      661 qgrdvnalmt agqlinwgmp tlaaemlnal dcqrtlplyl qasllpkaer gelvakaidv
      721 fpqfvrfpnt leevaalesi eecwfarhll acfyynkrsy nkaitlwqrc vemspefadg
      781 wrglaihawn kqhdyelaar yldnayqlap qdarllferd lldklsgatp ekrlarlenn
      841 leivlkrddm taellnlwhl tgqadkaadi latrkfhpwe ggegkvtsqf ilnqllrawq
      901 hldarqpqqa sellhaalhy penlsegrlp gqtdndiwfw qaicanaqgd eteamrclrl
      961 aatgdrtini hsyyndqpvd ylfwqgmalr llgeqhtaqq lfsemkqwaq emaktsiead
     1021 ffavsqpdll slygdlqqqh kekclmvaml asaglgevaq yesaraelta inpawpkaal
     1081 fttvmpfifn yvh
//
LOCUS       WP_258132792             592 aa            linear   BCT 02-MAR-2025
DEFINITION  prophage tail fiber N-terminal domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_258132792
VERSION     WP_258132792.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019996.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08400.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>592
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
     Region          1..134
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
     Region          <219..>321
                     /region_name="PHA00430"
                     /note="tail fiber protein"
                     /db_xref="CDD:222790"
     Region          <341..421
                     /region_name="COG5301"
                     /note="Phage-related tail fiber protein [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:444101"
     Region          343..380
                     /region_name="Phage_fiber_2"
                     /note="Phage tail fibre repeat; pfam03406"
                     /db_xref="CDD:427282"
ORIGIN      
        1 msvlisgvlt dgtglpmsgy hiilkarqnt savvmrtvat vltgpageya feaqtgrydv
       61 ylrscierey cvgdisvydd skpgtlndfl taldegdlkp dvvkrfeemv aqaqqsaeaa
      121 aeserqagqh vadaqqiksd cqtladnvqq naeavaedkk qvallassat qdaaraeqav
      181 kdadtivqka vdkfgeaatl tgeakasaea aakseqnaks yadnaagsaq qtaqdvtata
      241 tarddaerfa neaensaqas gaarnesvda agrasqykea assaatsaen aankaqghen
      301 ataeyarqak asqdasegna qeakrcrdea qqivddlkgs natttekglv qlcsdtdnds
      361 eelaatpkav kvvmdetntk apldspaftg tpttptppdd atglemanaa fvrkllaalv
      421 gsspealdtl nelaaalgnd pnfattvtkt lagkqplndv ltavgqitpr knsllyynes
      481 gnltltdltg raksllglgt yekmrallel kaaatmdpqs dirdrtpgrl alpgafgfgy
      541 afsqserldf nsdekflewv knategryfi ysynskifpd rnsftgivdv nl
//
LOCUS       WP_258132816             578 aa            linear   BCT 02-MAR-2025
DEFINITION  ESPR-type extended signal peptide-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_258132816
VERSION     WP_258132816.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 578)
  AUTHORS   Leyton,D.L., Rossiter,A.E. and Henderson,I.R.
  TITLE     From self sufficiency to dependence: mechanisms and factors
            important for autotransporter biogenesis
  JOURNAL   Nat Rev Microbiol 10 (3), 213-225 (2012)
   PUBMED   22337167
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 578)
  AUTHORS   Desvaux,M., Scott-Tucker,A., Turner,S.M., Cooper,L.M., Huber,D.,
            Nataro,J.P. and Henderson,I.R.
  TITLE     A conserved extended signal peptide region directs
            posttranslational protein translocation via a novel mechanism
  JOURNAL   Microbiology (Reading) 153 (Pt 1), 59-70 (2007)
   PUBMED   17185535
REFERENCE   3  (residues 1 to 578)
  AUTHORS   Desvaux,M., Cooper,L.M., Filenko,N.A., Scott-Tucker,A.,
            Turner,S.M., Cole,J.A. and Henderson,I.R.
  TITLE     The unusual extended signal peptide region of the type V secretion
            system is phylogenetically restricted
  JOURNAL   FEMS Microbiol Lett 264 (1), 22-30 (2006)
   PUBMED   17020545
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024418.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13018.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>578
                     /product="ESPR-type extended signal peptide-containing
                     protein"
     Region          1..>553
                     /region_name="PRK14849"
                     /note="autotransporter barrel domain-containing
                     lipoprotein"
                     /db_xref="CDD:184851"
ORIGIN      
        1 mnriyrviwn ctlqafqacs eltrragkts tvnlrkssgl ttkfsrltlg vllalsgsas
       61 gaslevdndq itnidtdvay daylvgwygt gvlnilaggn aslttittsv iganedsegt
      121 vnvlggtwrl ydsgnnarpl nvgqsgtgtl nikqkghvdg gylrlgsstg gvgtvnvege
      181 dsvlttelfe igsygtgsln itdkgyvtss ivailgyqag sngqvvvekg gewliknnds
      241 siefqignqg tgeatiregg litaentiig gnatgigtln vqdqdsvitv rrlyngyfgn
      301 gtlnisnngl innkeyslvg vqdgshgvvn vtdkghwnfl gtgeafryiy igdagdgeln
      361 vsregkvdsg iitagmketg tgnitvkdkn svitnlgtnl gydghgemni sneglvvsng
      421 gsslgygetg vgnvsittgg mwevnknvyt tigvagvgnl nisdggkfvs qnitflgdka
      481 sgigtlnlmd atssfdtvgi nvgnfgsgiv nvsngatlns tgygfiggna sgkgivnist
      541 dslwnlktss tnagfapifp dtcyhlthyw paaadipv
//
LOCUS       WP_258132902            1300 aa            linear   BCT 02-MAR-2025
DEFINITION  S6 family peptidase [Escherichia coli].
ACCESSION   WP_258132902
VERSION     WP_258132902.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 1300)
  AUTHORS   Maldonado-Contreras,A., Birtley,J.R., Boll,E., Zhao,Y., Mumy,K.L.,
            Toscano,J., Ayehunie,S., Reinecker,H.C., Stern,L.J. and
            McCormick,B.A.
  TITLE     Shigella depends on SepA to destabilize the intestinal epithelial
            integrity via cofilin activation
  JOURNAL   Gut Microbes 8 (6), 544-560 (2017)
   PUBMED   28598765
REFERENCE   2  (residues 1 to 1300)
  AUTHORS   Johnson,T.A., Qiu,J., Plaut,A.G. and Holyoak,T.
  TITLE     Active-site gating regulates substrate selectivity in a
            chymotrypsin-like serine protease the structure of haemophilus
            influenzae immunoglobulin A1 protease
  JOURNAL   J Mol Biol 389 (3), 559-574 (2009)
   PUBMED   19393662
REFERENCE   3  (residues 1 to 1300)
  AUTHORS   Henderson,I.R., Czeczulin,J., Eslava,C., Noriega,F. and Nataro,J.P.
  TITLE     Characterization of pic, a secreted protease of Shigella flexneri
            and enteroaggregative Escherichia coli
  JOURNAL   Infect Immun 67 (11), 5587-5596 (1999)
   PUBMED   10531204
REFERENCE   4  (residues 1 to 1300)
  AUTHORS   Benjelloun-Touimi,Z., Si Tahar,M., Montecucco,C., Sansonetti,P.J.
            and Parsot,C.
  TITLE     SepA, the 110 kDa protein secreted by Shigella flexneri: two-domain
            structure and proteolytic activity
  JOURNAL   Microbiology (Reading) 144 (Pt 7), 1815-1822 (1998)
   PUBMED   9695914
REFERENCE   5  (residues 1 to 1300)
  AUTHORS   Stein,M., Kenny,B., Stein,M.A. and Finlay,B.B.
  TITLE     Characterization of EspC, a 110-kilodalton protein secreted by
            enteropathogenic Escherichia coli which is homologous to members of
            the immunoglobulin A protease-like family of secreted proteins
  JOURNAL   J Bacteriol 178 (22), 6546-6554 (1996)
   PUBMED   8932311
REFERENCE   6  (residues 1 to 1300)
  AUTHORS   Bachovchin,W.W., Plaut,A.G., Flentke,G.R., Lynch,M. and
            Kettner,C.A.
  TITLE     Inhibition of IgA1 proteinases from Neisseria gonorrhoeae and
            Hemophilus influenzae by peptide prolyl boronic acids
  JOURNAL   J Biol Chem 265 (7), 3738-3743 (1990)
   PUBMED   2105953
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014452.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02395.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..1300
                     /product="S6 family peptidase"
                     /GO_function="GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=139792
     Region          1..50
                     /region_name="ESPR"
                     /note="Extended Signal Peptide of Type V secretion system;
                     pfam13018"
                     /db_xref="CDD:463773"
     Region          53..811
                     /region_name="Peptidase_S6"
                     /note="Immunoglobulin A1 protease; pfam02395"
                     /db_xref="CDD:396804"
     Region          748..925
                     /region_name="PL_Passenger_AT"
                     /note="Pertactin-like passenger domains (virulence
                     factors) of autotransporter proteins of the type V
                     secretion system. Autotransporters are proteins used by
                     Gram-negative bacteria to transport proteins across their
                     outer membranes. The C-terminal (beta) domain...; cl00185"
                     /db_xref="CDD:469645"
     Region          836..1300
                     /region_name="autotrans_barl"
                     /note="outer membrane autotransporter barrel domain;
                     TIGR01414"
                     /db_xref="CDD:273608"
ORIGIN      
        1 mnriyslrys avargviavs efarkcvhks vrrqcfsvll ltpvlfsagc lagtvnnelg
       61 yqlfrdfaen kgmfrpgatn iaiynkqger vgtldkaamp dfssvsvrdg iatlvdsqyv
      121 vsvkhnpdsy lnifrfgyge deytrvnrnn asqdfsilrl nklvteavps eitaqgtisg
      181 aylnkerypv fyrlgsgtqy ikdsngqltq lggayswltg gtvgslssyq ngemistssg
      241 lvfdyklnga mpiygekgds gsplfafdtv qnkwvlvgvl tagngaggrg nnwavipldf
      301 igqkfnednd apvtfrtseg gvlewsfnss tgagaltqgs ttyamhgqqg ndlnagknli
      361 fqgqngqinl kdsvsqgags ltfrdnytvt tsngstwtga giivdngvsv nwqvngvkdd
      421 nlhkigegtl tvqgagineg glkvgdgkvv lnqqadnkgq vqafssvnia sgrptvvlad
      481 erqvnpdtvs wgyrggtldv ngnsltfhql kaadygavla nnadkratit ldyalradkv
      541 alngwsesrk gtagnlykyn npytnttdyf ilkqstygyf ptdqssnatw efvghsqgda
      601 qklvadrfna agylfhgqlk gnlnvdnrlp egvtgalvmd gsadisgtft qengrltlqg
      661 hpvihayntq svadklaasg dhsvltqpts fsqedwenrs ftfdrlslkn tdfglgrnat
      721 lntmleatds tvtlgdrrvf idkndgngta faleegtsea vkdadrsvfn gsavlngktt
      781 ldimnatfng disghvgshv elsrrshwnm tksstldsfr skggtlsfvt dnwspktltv
      841 ntlhassmni amgvstadnt gdridilnka tgghntldls slfdqtvtlk ndltlasapv
      901 gtshgyfsfa slnrgftvyt pdtqvqekdg rvywqlksha gttesqvstd vsddvtdtts
      961 pvapdtgstg steadgivse gnnsngvsps pdspaenagt mvngstlfkg adntsllkka
     1021 ramfaarefi lsdsadrwtq vvdnsdadgg awamtgyshg gyddfslnqs glnvgfrqsa
     1081 agnawwgmga efyrghsstd dyrddfslwg vhvlagksfa gglfvdgmtg yrelsedyti
     1141 qgelsdlsgr akshiltvgi rggwkmhaap ldmsitptvs lngarvdgnr lqgrersvel
     1201 hdgdalwlka gveaekvsgn mtlkagiwrn itlndmpgmt lrddwkarhy daekadrytv
     1261 sfgingklte klsvqakvns sfdgyfktav egvvgvrydf
//
LOCUS       WP_258133013             154 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF4165 domain-containing protein [Escherichia fergusonii].
ACCESSION   WP_258133013
VERSION     WP_258133013.1
KEYWORDS    RefSeq.
SOURCE      Escherichia fergusonii
  ORGANISM  Escherichia fergusonii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF025127.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13752.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Escherichia fergusonii"
                     /db_xref="taxon:564"
     Protein         1..154
                     /product="DUF4165 domain-containing protein"
                     /calculated_mol_wt=16572
     Region          18..137
                     /region_name="DUF4165"
                     /note="Domain of unknown function (DUF4165); pfam13752"
                     /db_xref="CDD:433454"
ORIGIN      
        1 mkiklallia fagfsagasa eiaefsfkdt lnvkktvspa svwinpvtsf dvavisgldr
       61 yitlsllksd gsliwstkss lvtvddrtts stgfdyygkt ltvpamgeds ftlrevitdl
      121 qgkevsrqdy plaidrtppa tgtisytrng wnfg
//
LOCUS       WP_258133017             439 aa            linear   BCT 02-MAR-2025
DEFINITION  Ig-like domain-containing protein, partial [Escherichia
            fergusonii].
ACCESSION   WP_258133017
VERSION     WP_258133017.1
KEYWORDS    RefSeq.
SOURCE      Escherichia fergusonii
  ORGANISM  Escherichia fergusonii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014428.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02369.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Escherichia fergusonii"
                     /db_xref="taxon:564"
     Protein         1..>439
                     /product="Ig-like domain-containing protein"
     Region          <1..>357
                     /region_name="Ve_IatC_Nterm"
                     /note="inverse autotransporter adhesin IatC N-terminal
                     domain; NF040978"
                     /db_xref="CDD:468908"
     Region          373..439
                     /region_name="Invasin_D3"
                     /note="Invasin, domain 3; cl23771"
                     /db_xref="CDD:474048"
ORIGIN      
        1 mnnknfnltl payktngtpg esveeantyn infvatdkkg nksnsatlkv ivtssghsas
       61 arftgtpvvt gspspangtt avqvgftvtd gsgnplpdqd vvityndgts eksvtvktdt
      121 sgvaqadvtg tragdtavta qvngqaqqav vkfvpdavsa rftgtpvvtg spspangtta
      181 vqvgftvtdg sgnplpdqdv vityndgtae rsvtvktdag gvaqadvtgt ragdtavtaq
      241 vngqaqqavv kfvpdavsar ftgtpvvtgs pspangttav qvgftvtdgn gnplpdqdvv
      301 ityndgtsek svtvktdtsg vaqadvtgsr agdtavtaqv ngqaqqavvk fvpdavsarf
      361 tgtpvvtgsp spangttavq vgftvtdgsg nplpdqdvvi tyndgtaers vtvktdaggv
      421 aqadvtgtra gdtavtaqv
//
LOCUS       WP_258133097             501 aa            linear   BCT 02-MAR-2025
DEFINITION  prophage tail fiber N-terminal domain-containing protein, partial
            [Escherichia coli].
ACCESSION   WP_258133097
VERSION     WP_258133097.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019996.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF08400.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>501
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
     Region          1..134
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cl21470"
                     /db_xref="CDD:473874"
     Region          462..499
                     /region_name="Phage_fiber_2"
                     /note="Phage tail fibre repeat; pfam03406"
                     /db_xref="CDD:427282"
ORIGIN      
        1 mavkisgvlk dgagkpvqnc tiqlkakrns ttvvantvas enpdeagrys mdveygqysv
       61 illvegfpps hagtitvyed sqpgtlndfl gamteddarp ealrrfelmv eevarnasav
      121 aqntaaakks agdagtsare aathatdaag saraastsag qaatsaqeas ssagtastka
      181 teasksaaaa essksaaats agaaktsetn aaasqksaat sastattkas eaatsardaa
      241 askeaaksse tnastsassa assataagns vkaaktsetn arssetaaeq sasaaadset
      301 aaassareas ikaeeaavsa taagksaesa assastattk ageateqasa aarsasaakt
      361 setnakaset saessktaaa ssassaassa ssasaskdea trqasaargs attastkate
      421 aagsaaaaaq skstaesaat raetaakrae diasavaled asttkkgivq lssatnstse
      481 sqaatpkavk aaydlangky t
//
LOCUS       WP_258133115             320 aa            linear   BCT 02-MAR-2025
DEFINITION  SDR family oxidoreductase, partial [Escherichia coli].
ACCESSION   WP_258133115
VERSION     WP_258133115.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 320)
  AUTHORS   Aarts,M.G., Hodge,R., Kalantidis,K., Florack,D., Wilson,Z.A.,
            Mulligan,B.J., Stiekema,W.J., Scott,R. and Pereira,A.
  TITLE     The Arabidopsis MALE STERILITY 2 protein shares similarity with
            reductases in elongation/condensation complexes
  JOURNAL   Plant J 12 (3), 615-623 (1997)
   PUBMED   9351246
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019605.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07993.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..>320
                     /product="SDR family oxidoreductase"
     Region          2..276
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(8,10..11,13,34..36,94..96,133..135,163,167,188..191)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(113,135,163,167)
                     /site_type="active"
                     /db_xref="CDD:187535"
ORIGIN      
        1 mklllltgat gflggavldk lldncnninl lllvraptpq aglerikenm rkfnvceerl
       61 haltndnilp gdlnnpeafl mdprldevth vincaaiasf gnnpfiwnvn vtgtlafarr
      121 makvaglkrf lhvgtamsct phtgslvkee sassetgehl veythskati eylmrkqcpd
      181 lpllvarpsi ivghsrlgcl pstsifwvfr mglmlqkfmc slddkidvip vdycadallm
      241 llesslinge ivhisagkes svtfsaidea varalncdpv gdrytkvsyd ilamwicpyi
      301 srhllslnpl laccrrysrg
//
LOCUS       WP_258133183             287 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Microbacterium sp.
            MYb64].
ACCESSION   WP_258133183
VERSION     WP_258133183.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb64
  ORGANISM  Microbacterium sp. MYb64
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 287)
  AUTHORS   Maqbool,A., Horler,R.S., Muller,A., Wilkinson,A.J., Wilson,K.S. and
            Thomas,G.H.
  TITLE     The substrate-binding protein in bacterial ABC transporters:
            dissecting roles in the evolution of substrate specificity
  JOURNAL   Biochem Soc Trans 43 (5), 1011-1017 (2015)
   PUBMED   26517916
REFERENCE   2  (residues 1 to 287)
  AUTHORS   Wilkens,S.
  TITLE     Structure and mechanism of ABC transporters
  JOURNAL   F1000Prime Rep 7, 14 (2015)
   PUBMED   25750732
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 287)
  AUTHORS   ter Beek,J., Guskov,A. and Slotboom,D.J.
  TITLE     Structural diversity of ABC transporters
  JOURNAL   J Gen Physiol 143 (4), 419-435 (2014)
   PUBMED   24638992
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: Conserved Domain (CDD)
            Evidence Accession :: Domain architecture ID 10194221
            Evidence Source    :: NCBI SPARCLE
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Microbacterium sp. MYb64"
                     /db_xref="taxon:1848691"
     Protein         1..287
                     /product="ABC transporter substrate-binding protein"
                     /GO_component="GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA]"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /GO_function="GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /calculated_mol_wt=29185
     Region          53..276
                     /region_name="PBP2_peptides_like"
                     /note="Peptide-binding protein and related homologs; type
                     2 periplasmic binding protein fold; cd13530"
                     /db_xref="CDD:270248"
ORIGIN      
        1 mslapalrrv alvstiaaaa alslaacsgs aasapsagad atgaalqtvt agkltiatgd
       61 pdyepwfvdn epsngkgfeg avahavaael gfsdkqivwt rtgfdaaiap gpkdwdlniq
      121 qfsisedrkk avdfsssyyt ttqavvaakg tpaasatsia dlkkakvgva tgttsytvak
      181 aqlgtgdlsv fnsvddvvqa lkggqidami tdlpgafyvt aaqlenaavv gqfaddkggd
      241 qfafvlpkns sltpavtkav dalqkngtia elqkkwlsea vnvpvlk
//
LOCUS       WP_258132896              51 aa            linear   BCT 02-MAR-2025
DEFINITION  PerC family transcriptional regulator [Escherichia coli].
ACCESSION   WP_258132896
VERSION     WP_258132896.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 51)
  AUTHORS   Gomez-Duarte,O.G. and Kaper,J.B.
  TITLE     A plasmid-encoded regulatory region activates chromosomal eaeA
            expression in enteropathogenic Escherichia coli
  JOURNAL   Infect Immun 63 (5), 1767-1776 (1995)
   PUBMED   7729884
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017845.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06069.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..51
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..51
                     /product="PerC family transcriptional regulator"
                     /calculated_mol_wt=5827
     Region          10..>37
                     /region_name="PerC"
                     /note="PerC transcriptional activator; pfam06069"
                     /db_xref="CDD:310570"
ORIGIN      
        1 msrnrptpei vkdaiagrle sanlwrrasa rwlmlmgyym nasrfaqlpl f
//
LOCUS       WP_258133240            1254 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF3320 domain-containing protein [Cronobacter sakazakii].
ACCESSION   WP_258133240
VERSION     WP_258133240.1
KEYWORDS    RefSeq.
SOURCE      Cronobacter sakazakii
  ORGANISM  Cronobacter sakazakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF023212.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF11784.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Cronobacter sakazakii"
                     /db_xref="taxon:28141"
     Protein         1..1254
                     /product="DUF3320 domain-containing protein"
                     /calculated_mol_wt=140735
     Region          63..883
                     /region_name="DNA2"
                     /note="Superfamily I DNA and/or RNA helicase [Replication,
                     recombination and repair]; COG1112"
                     /db_xref="CDD:440729"
     Region          903..1000
                     /region_name="MTES_1575"
                     /note="REase_MTES_1575; pfam18741"
                     /db_xref="CDD:465853"
     Region          1115..1162
                     /region_name="DUF3320"
                     /note="Protein of unknown function (DUF3320); pfam11784"
                     /db_xref="CDD:432073"
ORIGIN      
        1 maiqaalevv yrrleaqglg dfclelhssk tskvdflkql erawdardil ttteweqeaa
       61 kvqhlrdkln evvrllhhrw pngltlhqam grvirdasnl tpqftwlagt lhtaeqmeqf
      121 rdiarrleln rhaliqhgth fecinqtdwt ngwqssllte ahnfpnnieq lkqatdellk
      181 atgitlesde pekiiqltml cealskahgl dlsfmflpda ttridaakma isllkeieia
      241 ktqlsvvypd nswlqvnteq ihksleeadk kfwflatrar kkvigayirq cslcatpdis
      301 tdvqviktlq slhkklselm pltasipgcn gldteysdlq haidladair iaqsgfassp
      361 qqlaeirsav ktllidanel ldaqgiiaal teklrvtlhs fsesksrfcs likatesemt
      421 isalhscaln ivnhqsslks wsdwcrvree avqqgllpli halihlgphe qsasalfeta
      481 ycrwfaswmi dseplmhnfv paehmsdiea yriqtdrlak ltvryirarl cgvipaknei
      541 trqggfallk nelqksrrhk pvrqmaaemg daltklapcm lmsplsvaqf lppeqalfdl
      601 vifdeasqit pwdaigamar gkqvviagdp rqmpptsffn raanetdddt eedlesilde
      661 claaglynhs lswhyrsrhe sliafsnhhy ysnnlitfpa petrqcavhw ykvagvyskg
      721 kgrhnqaeae aivaetvkrl kdknfitsgk sigiitlnte qqslisdlld rarqqhpeie
      781 pyfqpeleep vvvknletvq gderdlimlg igygptepga nsmsmnfgpl nrqggwrrln
      841 vavtrarqem ivfssfdpsl idlnrtnaea vsqlkhfief aqrgpvalaq avrgsvgsyd
      901 spfeeavang lrrkgwqvvp qigvsrfrid lgivhpdkpg dylvgvecdg atyhsaatar
      961 drdkvrstil qglgwkllrl wstdwwidke galeklhtai vklleesraa dtavaeannh
     1021 ekgtlaiese anvirektal knaaqvande ellasvtnik veseseenke eaetlsselk
     1081 yasaatsdkn acktagkyiv nnlqewqgct epekfymaey detlknlvae ivnreapvld
     1141 talvqriara hgftragrli rerimelvdh hyyvatddng edfvwlseaq kkewnsfrlp
     1201 ateadirqvd aipseelral amsvsganki pkmikllgik rvtsqvrqrl elvi
//
LOCUS       WP_258133251             511 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Microbacterium sp.
            MYb64].
ACCESSION   WP_258133251
VERSION     WP_258133251.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb64
  ORGANISM  Microbacterium sp. MYb64
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Microbacterium sp. MYb64"
                     /db_xref="taxon:1848691"
     Protein         1..511
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=54372
     Region          43..493
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mkrvplaiaa avaavlalts csggagattq asdaaaanap ddlnignfld itswdpslad
       61 igfdgpylsa vydalvaldk dgkpvpalae kwevapddls itltlhkggv fsdgspvdad
      121 avvksleylk agarsgeayt nvssfeavdd htvkisltqr ddtilyfmgl grsyvmspka
      181 iaagtlgkqp vgsgpytldg tksvagseyh ftkvpgywda kaysfknlai fpimdatarq
      241 namlsgqinv qygditnkda akqqgwntis rvsgwaglvi tdhtgaknka lgdlkvrqal
      301 nyafdgaail kavgsgagva tnqvfpdggs indpslntqy aynvdkakql ladagypngf
      361 dismpmspif eqwkpaadqa laaigvkvtw dnmqmpdyql napnypmfis flamdgneva
      421 tvarqvtskq wfnptpdyas nsvlkplvdk vhgtkgadqt aaikelnkal veqawwsvwy
      481 qadntyysvp gikiqpvigm mfptlryitk g
//
LOCUS       WP_258133301             156 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6421 family protein, partial [Microbacterium sp. MYb64].
ACCESSION   WP_258133301
VERSION     WP_258133301.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb64
  ORGANISM  Microbacterium sp. MYb64
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 156)
  AUTHORS   Li,R., Xie,Z., Tian,Y., Yang,H., Chen,W., You,D., Liu,G., Deng,Z.
            and Tan,H.
  TITLE     polR, a pathway-specific transcriptional regulatory gene,
            positively controls polyoxin biosynthesis in Streptomyces cacaoi
            subsp. asoensis
  JOURNAL   Microbiology (Reading) 155 (Pt 6), 1819-1831 (2009)
   PUBMED   19383687
REFERENCE   2  (residues 1 to 156)
  AUTHORS   Chen,W., Huang,T., He,X., Meng,Q., You,D., Bai,L., Li,J., Wu,M.,
            Li,R., Xie,Z., Zhou,H., Zhou,X., Tan,H. and Deng,Z.
  TITLE     Characterization of the polyoxin biosynthetic gene cluster from
            Streptomyces cacaoi and engineered production of polyoxin H
  JOURNAL   J Biol Chem 284 (16), 10627-10638 (2009)
   PUBMED   19233844
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039440.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19985.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Microbacterium sp. MYb64"
                     /db_xref="taxon:1848691"
     Protein         <1..156
                     /product="DUF6421 family protein"
     Region          <2..154
                     /region_name="DUF6421"
                     /note="Family of unknown function (DUF6421); pfam19985"
                     /db_xref="CDD:437817"
ORIGIN      
        1 hlvqyavifd rifrfsitgn rtrnydavgg qllfawlhqr gvlhwtdtal afdwdnvpda
       61 vvalgdaidd lywhsidrpk iahwlaayel vrgtltphpa srwarglsdd ilagapkgyt
      121 davlddefpl smffetldkk mkpiiestvg irgtdd
//
LOCUS       WP_258133374             442 aa            linear   BCT 02-MAR-2025
DEFINITION  GAF domain-containing protein [Microbacterium sp. MYb64].
ACCESSION   WP_258133374
VERSION     WP_258133374.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb64
  ORGANISM  Microbacterium sp. MYb64
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 442)
  AUTHORS   Hughes,J.
  TITLE     Phytochrome three-dimensional structures and functions
  JOURNAL   Biochem Soc Trans 38 (2), 710-716 (2010)
   PUBMED   20298248
REFERENCE   2  (residues 1 to 442)
  AUTHORS   Heikaus,C.C., Pandit,J. and Klevit,R.E.
  TITLE     Cyclic nucleotide binding GAF domains from phosphodiesterases:
            structural and mechanistic insights
  JOURNAL   Structure 17 (12), 1551-1557 (2009)
   PUBMED   20004158
REFERENCE   3  (residues 1 to 442)
  AUTHORS   Aravind,L. and Ponting,C.P.
  TITLE     The GAF domain: an evolutionary link between diverse
            phototransducing proteins
  JOURNAL   Trends Biochem Sci 22 (12), 458-459 (1997)
   PUBMED   9433123
REFERENCE   4  (residues 1 to 442)
  AUTHORS   Santero,E., Hoover,T.R., North,A.K., Berger,D.K., Porter,S.C. and
            Kustu,S.
  TITLE     Role of integration host factor in stimulating transcription from
            the sigma 54-dependent nifH promoter
  JOURNAL   J Mol Biol 227 (3), 602-620 (1992)
   PUBMED   1404379
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013736.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01590.32
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Microbacterium sp. MYb64"
                     /db_xref="taxon:1848691"
     Protein         1..442
                     /product="GAF domain-containing protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=47937
     Region          20..>367
                     /region_name="AcoR"
                     /note="Transcriptional regulator DhaR of acetoin/glycerol
                     metabolism [Transcription]; COG3284"
                     /db_xref="CDD:442514"
ORIGIN      
        1 mssgwqpsre papaasrlli eraheelvag niddgrlqnv rslvreswer swrqrvgaeg
       61 lppldftada ldayrrahpl agamdtiral llpgsaddsg vivavgdhag rllwvegdln
      121 qrilsgemgf veganwsera vgtsapgtal elgasvqirg aehynrlvqp wsctaapvfd
      181 pedrrilgvi dvtggaeaas pqarmlvdat araveaellv arlraraqpt glsapaarrr
      241 pvpdraalrv lgrdrarlev sggdgervve lsarhaeill llavhrqgls aerlaelvyg
      301 egssadtlrp eivrlrkale riwpalvpes rpyrlpvple tdaqdvlsll drgahrvals
      361 ayrgpvlpds tspgveeyre tvrstlretm rteasidvll syaeipegse daeilrlcle
      421 llparspkra glvgrierle qa
//
LOCUS       WP_258133412            1187 aa            linear   BCT 02-MAR-2025
DEFINITION  PQQ-dependent sugar dehydrogenase, partial [Microbacterium sp.
            MYb32].
ACCESSION   WP_258133412
VERSION     WP_258133412.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb32
  ORGANISM  Microbacterium sp. MYb32
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 1187)
  AUTHORS   Pallanca,J.E. and Smirnoff,N.
  TITLE     Ascorbic acid metabolism in pea seedlings. A comparison of
            D-glucosone, L-sorbosone, and L-galactono-1,4-lactone as ascorbate
            precursors
  JOURNAL   Plant Physiol 120 (2), 453-462 (1999)
   PUBMED   10364396
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019607.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07995.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..1187
                     /organism="Microbacterium sp. MYb32"
                     /db_xref="taxon:1848685"
     Protein         1..>1187
                     /product="PQQ-dependent sugar dehydrogenase"
     Region          315..716
                     /region_name="YliI"
                     /note="Glucose/arabinose dehydrogenase, beta-propeller
                     fold [Carbohydrate transport and metabolism]; COG2133"
                     /db_xref="CDD:441736"
     Region          <889..995
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
ORIGIN      
        1 mhertmrpas sstrsaappp rsfgvrrtga lvaavavvga lltaspaaaa epftelidfe
       61 gyervalngq dgwaasgapr viadplngnn qvvesvgggq qsyraipaia egdtgtlffr
      121 flrtgsvdts fgltdvdapn dyvnsrayvn nqnddvlrvr dggafkpagv wskdawqcvw
      181 ivadnaadkv tvysqggaye eqtrlpegte qqfgfrqavn galdrffwkn gatstgrlll
      241 ddvavdntge nlaiatgnpg dcapggtane pllnplpdpa ladlgievte laqlpksqtt
      301 patqdprlvr hnrithldev pddsgrlmvp dnndilylvd kesgeyvpyl nvrnefidnf
      361 hnsaglgtgl gsaefhpdfa englfytvht eggtaltedt pdfpafgtta fhsvitewka
      421 ddpsaatfag threvmripf agrvhtvqqi afnptvsagd adygnlyvlv gdggngvgng
      481 npqdlatpqg kilrvnptgd dsengaygvp ddnpfvdead alpeiyavgm rdphriswdt
      541 egdhtmylah igewqvesvy avepgdnfgw svregsflae nrqifplped daengftypv
      601 aaydhnrdpg qtgdagvavn ggfvyrgeip elqgrylftd lvrgwvlstd saemvrndgd
      661 iadlatieel rvfadgvett fqelvgdkrv dlrfgsdadg elylvskang kiwkvtgars
      721 vdeptnpfvl palapnlvth hdfdhpdaak ptieldqgrs gtpislingg vemrvadray
      781 pgagealqtq qmsprtasnd dwkagvydad gvesldrfag tdkasvmgwf kptgdhpaln
      841 sgtakpddvy naiglagvlt gtsdghavra llevitvdge lklvalgrrv dgagswtfaa
      901 dlpwneilkk gqwvhlaatf dfaagemklf mngeelagky taanpwgdgs tsdtapagik
      961 iggsfpqntk eanpfngrmd diilldtvpt aeqvaaqyal yavppveppv ppactpdget
     1021 ltdvmaeddw aprtpakwdf pgdevvltea gtnpndgirr pfeyavlteg eelgsfdltg
     1081 qvrldekasv nnrdviivfg wksdteyyya hlsqdnsiyp hngifkvnka dreriddqwd
     1141 gavgappavt deewhdvrvl rcadtgdiav yvdgldtplm tandktf
//
LOCUS       WP_258133415             427 aa            linear   BCT 02-MAR-2025
DEFINITION  aminotransferase class V-fold PLP-dependent enzyme, partial
            [Microbacterium sp. MYb32].
ACCESSION   WP_258133415
VERSION     WP_258133415.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb32
  ORGANISM  Microbacterium sp. MYb32
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012488.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00266.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Microbacterium sp. MYb32"
                     /db_xref="taxon:1848685"
     Protein         1..>427
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
     Region          17..390
                     /region_name="CsdA"
                     /note="Selenocysteine lyase/Cysteine desulfurase [Amino
                     acid transport and metabolism]; COG0520"
                     /db_xref="CDD:440286"
ORIGIN      
        1 msaplfpapl tlnsgmrard awpldpavih lnhgsfgavp svvvehqdal rrradlspve
       61 wfpriaervq earertapfv garaedsafv pnasaaatvv ynalqletgd eilvtdqgyg
      121 aitmgaerla rrfgarvrtv alpllssdde ivqlfvdqlt prtrllvidq itsptarllp
      181 arriadaaae rgvrtlvdga hapglipdaa avaggdwwfg nlhkwpcapr gsallvtsaq
      241 drdelwplid swaaretypt rfdtqgtida ttylatptai dfienefgwa aartamaeia
      301 dagaeliaea lrpygdedpl tplpspvpsm rlvrlplglg atreeadalr mdlldevgve
      361 taftsfrgig yfrlsahlyn eaadyeafve rcipqilsra girrlpaagp rghrdgagll
      421 adgrpvg
//
LOCUS       WP_258133485             269 aa            linear   BCT 02-MAR-2025
DEFINITION  transporter substrate-binding domain-containing protein
            [Arthrobacter sp. MYb224].
ACCESSION   WP_258133485
VERSION     WP_258133485.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. MYb224
  ORGANISM  Arthrobacter sp. MYb224
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 269)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012707.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00497.25
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Arthrobacter sp. MYb224"
                     /db_xref="taxon:1848600"
     Protein         1..269
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /calculated_mol_wt=29321
     Region          38..268
                     /region_name="Periplasmic_Binding_Protein_Type_2"
                     /note="Type 2 periplasmic binding fold superfamily;
                     cl21456"
                     /db_xref="CDD:473866"
ORIGIN      
        1 mtrllpvfal savlltagcs apnpgqsnda ataagdtrla svsesgilkv cttgdyrpft
       61 yldpetgdws giditmakdl aesldveaef iqtswkdlmp dflskcdigv ggvsismera
      121 qqayyseatl degktpitlc envekydtvk eintpgvrsi tpiggtnekf aeanypegei
      181 irfennntif deiiagradv mttdasetrw vanehpqlca vhpdkpfnfs qkayllplgd
      241 dkfqeyvdqw lnmakhdgtl aaaekpwfg
//
LOCUS       WP_258133537             313 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF2797 domain-containing protein [Arthrobacter sp. MYb224].
ACCESSION   WP_258133537
VERSION     WP_258133537.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. MYb224
  ORGANISM  Arthrobacter sp. MYb224
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF022430.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF10977.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Arthrobacter sp. MYb224"
                     /db_xref="taxon:1848600"
     Protein         1..313
                     /product="DUF2797 domain-containing protein"
                     /calculated_mol_wt=34827
ORIGIN      
        1 milerenrql chgisfsqne pdpmlrlrrg ddwineplre nrsitlsvge tkfclgyvsm
       61 radgsrslhp cpklkglntg tqcdgcrrld qskfmhqfhk tgeapeglrk yleqphflyv
      121 asfaqgatkv gttsmqskwt rlaqqgavaa ryvaravdga airvledlvt ehvglkqqvr
      181 qkskvkglts wdmdaaslda anasaarrtq tflesqgdls aygvelmdqr weqpafarev
      241 irawdaksvh pwagavpgse lnlrirgvlg qvilvdsgae ttlrlldaae lktrvvsvke
      301 qrgeffeeqs plf
//
LOCUS       WP_258133581             527 aa            linear   BCT 02-MAR-2025
DEFINITION  ABC transporter substrate-binding protein [Arthrobacter sp.
            MYb224].
ACCESSION   WP_258133581
VERSION     WP_258133581.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. MYb224
  ORGANISM  Arthrobacter sp. MYb224
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012706.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00496.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Arthrobacter sp. MYb224"
                     /db_xref="taxon:1848600"
     Protein         1..527
                     /product="ABC transporter substrate-binding protein"
                     /calculated_mol_wt=57056
     Region          33..495
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
ORIGIN      
        1 mtlplilfta gcqpasgqaa deqpisllta alpetlnpla gfdsyglgki neslftlege
       61 qdqlpnlvpl laakepkisa dslvwdisls qdikfsdgtt fdaqdvvasy kaildprtas
      121 plagslenle svsapnehtv rfklkeaqvs fktslligia padlvdpakp vaesalsrtp
      181 vgtgpyvven fssaqlvlta npnyrtgpvq aspviyeaap ddnarsqrla tggftgtvlp
      241 prlahsfagr agyevltats adwrgislpa ehpftsepev rlalnlavdr eqlidavldg
      301 sgrpaytfvs peygrnyaak atfahdpera aalldksgwv esehgvrskd gaeaaftvly
      361 npgdtlrrdl slavaaqlae fgitvdvraa tfdeaeprst qdaimlgggd dpydvdtqly
      421 kmlhssypea gayydnpsry adsemdeqlh igrtnldpda rsaayrkvqq ryvqqpsmll
      481 lafldhtyvq rsdvsehwnt sslllephdh gttwgpwaki hewtrkq
//
LOCUS       WP_258133609             759 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5682 family protein [Escherichia coli].
ACCESSION   WP_258133609
VERSION     WP_258133609.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040143.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18934.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..759
                     /product="DUF5682 family protein"
                     /calculated_mol_wt=83331
     Region          20..716
                     /region_name="DUF5682"
                     /note="Family of unknown function (DUF5682); pfam18934"
                     /db_xref="CDD:436841"
ORIGIN      
        1 mseplivgir hhspacarlv ksliesqrpr yvliegpadf ndrvdelfla hqlpvaiysy
       61 cqyqdgaapg rgawtpfaef spewqalqaa rriqaqtyfi dlpcwaqsee vddspdtqee
      121 sqalllratr mdnsdtlwdh lfedesqqta lpsalahyfa qlrgdspgda lnrlreafma
      181 rwigwamqqn ngdvlvvcgg whapvlakmw recpqeintp elpsladavt gcyltpysek
      241 rldvlagyls gmpapvwqnw cwqwglqqag eqllktvltr lrqhklpast admaaahlha
      301 malaqlrght lplrtdwlda iagslikeal naplpwsyrg vihpdtdpil ltlidtlagd
      361 gfgklapstp qpplpkdvtc elertaislp aeltlnrfnp nglaqsqvlh rlaileipgi
      421 vrqqgstltl agngeerwkl trplsqhaal ieaacfgatl qeaarhklea dmldaggigs
      481 ittclsqaal aglasfsqql leqltlliaq enqfaemgqa levlyalwrl deisgmqgaq
      541 ilqttlcaai drtlwlcesn grpdekefha hlhswqalch ilrdlhsgvq llgislsaav
      601 allerrsqai hapaldrgaa hgalmrlehp nasaeaaltm laqlspaqsg ealhgllala
      661 rhqlacqptf iagfsshlnq lsdadfinal pdlraamawl pprergtlah qvlehyqlaq
      721 lpvsalqmpl hcppqaiahh qqleqqalas lqnwgvfhv
//
LOCUS       WP_258133721             358 aa            linear   BCT 02-MAR-2025
DEFINITION  DnaT-like ssDNA-binding domain-containing protein [Escherichia
            coli].
ACCESSION   WP_258133721
VERSION     WP_258133721.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 358)
  AUTHORS   Fujiyama,S., Abe,Y., Tani,J., Urabe,M., Sato,K., Aramaki,T.,
            Katayama,T. and Ueda,T.
  TITLE     Structure and mechanism of the primosome protein DnaT-functional
            structures for homotrimerization, dissociation of ssDNA from the
            PriB.ssDNA complex, and formation of the DnaT.ssDNA complex
  JOURNAL   FEBS J 281 (23), 5356-5370 (2014)
   PUBMED   25265331
REFERENCE   2  (residues 1 to 358)
  AUTHORS   Liu,Z., Chen,P., Wang,X., Cai,G., Niu,L., Teng,M. and Li,X.
  TITLE     Crystal structure of DnaT84-153-dT10 ssDNA complex reveals a novel
            single-stranded DNA binding mode
  JOURNAL   Nucleic Acids Res 42 (14), 9470-9483 (2014)
   PUBMED   25053836
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037684.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17948.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..358
                     /product="DnaT-like ssDNA-binding domain-containing
                     protein"
                     /calculated_mol_wt=39953
     Region          <206..278
                     /region_name="DnaT"
                     /note="DnaT DNA-binding domain; cl46275"
                     /db_xref="CDD:480615"
ORIGIN      
        1 msnawlrlwh dmpndpkwrt iarvsgqpia tvmavyihll vsasrnvttc hgvsrrghvd
       61 vtaedlasal dvteevidsi lqamqgrvld gdlitgwekr qvskedngni sqtaktpaer
      121 kraqrerekq reqngdccge isrdvtschd esrichdesr hvttdkdkdl kelnpthnar
      181 vresaptsns tgapsqttdp eyldglsepi gkfpmtdgwh psldfrrraa vwgvslpepe
      241 ftpaelaafr dywmaegkvf tqvqweqkfa rhvnhvraqa kpvskgvnha aapggtasra
      301 vreiraareq werengfird gngveavgth ggglfepmds eergrtvetl dctdwrdd
//
LOCUS       WP_258133794             420 aa            linear   BCT 02-MAR-2025
DEFINITION  MFS transporter [Arthrobacter sp. MYb224].
ACCESSION   WP_258133794
VERSION     WP_258133794.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. MYb224
  ORGANISM  Arthrobacter sp. MYb224
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019310.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07690.21
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Arthrobacter sp. MYb224"
                     /db_xref="taxon:1848600"
     Protein         1..420
                     /product="MFS transporter"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /calculated_mol_wt=42637
     Region          31..393
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(34..35,38..39,42,74,130..131,133..135,141,163,
                     166..167,170,245,248..249,252..254,276,280,333..334,338,
                     342,358,361..362,365..366,369)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340863"
ORIGIN      
        1 mlsnepneii epkpgfaslv pmvgtaylpl sffarlplam ltigsmtlvt assgsyalgg
       61 lsaamvglgs aiggptlgyl adrlgqrpvl ipaailhtil lliltwygns gpgmvvgvlv
      121 lisllagatg pqvgpmsrvr wismtrqqkr npkvltaals lesmldelgf vfgpvavgll
      181 asllhptlpl liaavltvvl vpvfakhrtg davklhaata qtgrvrigra rlaaigalvm
      241 gmiglgtvfg ssaagtlafa gaqgdsnqgg llygamgiss alaavsvaaw pqgfsqinrw
      301 itcglaltia sfglhfaatv pwmllalfva gfavgpvivt vmtlggevap pkllstvmtl
      361 lsagivvgts ignglaglla dsagylgafw vssaaaflil laalamkliv srapslsrvr
//
LOCUS       WP_258133871             141 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: NUDIX domain-containing protein [unclassified
            Arthrobacter].
ACCESSION   WP_258133871
VERSION     WP_258133871.1
KEYWORDS    RefSeq.
SOURCE      unclassified Arthrobacter
  ORGANISM  unclassified Arthrobacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="unclassified Arthrobacter"
                     /db_xref="taxon:235627"
     Protein         1..141
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=15599
     Region          1..130
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mvrdrhrvll qrrqgtgyld gywstaaagh veagesaiqa avretreelg ieldamqlkp
       61 lttvhrpqss netaggridf ffecttwtgv pqimephkas altwfdlcel pgkvvphery
      121 ilerlgndlp aiiaanslma q
//
LOCUS       WP_258133882             261 aa            linear   BCT 02-MAR-2025
DEFINITION  IclR family transcriptional regulator domain-containing protein
            [Arthrobacter sp. MYb216].
ACCESSION   WP_258133882
VERSION     WP_258133882.1
KEYWORDS    RefSeq.
SOURCE      Arthrobacter sp. MYb216
  ORGANISM  Arthrobacter sp. MYb216
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (residues 1 to 261)
  AUTHORS   Matilla,M.A., Velando,F., Martin-Mora,D., Monteagudo-Cascales,E.
            and Krell,T.
  TITLE     A catalogue of signal molecules that interact with sensor kinases,
            chemoreceptors and transcriptional regulators
  JOURNAL   FEMS Microbiol Rev 46 (1) (2022)
   PUBMED   34424339
REFERENCE   2  (residues 1 to 261)
  AUTHORS   Galinier,A., Bleicher,F., Negre,D., Perriere,G., Duclos,B.,
            Cozzone,A.J. and Cortay,J.C.
  TITLE     Primary structure of the intergenic region between aceK and iclR in
            the Escherichia coli chromosome
  JOURNAL   Gene 97 (1), 149-150 (1991)
   PUBMED   1995429
REFERENCE   3  (residues 1 to 261)
  AUTHORS   Smith,C.P. and Chater,K.F.
  TITLE     Structure and regulation of controlling sequences for the
            Streptomyces coelicolor glycerol operon
  JOURNAL   J Mol Biol 204 (3), 569-580 (1988)
   PUBMED   3225846
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013757.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01614.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Arthrobacter sp. MYb216"
                     /db_xref="taxon:1848597"
     Protein         1..261
                     /product="IclR family transcriptional regulator
                     domain-containing protein"
                     /calculated_mol_wt=28206
     Region          13..256
                     /region_name="pcaR_pcaU"
                     /note="beta-ketoadipate pathway transcriptional
                     regulators, PcaR/PcaU/PobR family; TIGR02431"
                     /db_xref="CDD:131484"
ORIGIN      
        1 mgtpivaeqp dyyvksaekt lavllafkge nsaltvsqva aatdqtrasa rrflltlvdl
       61 gylavvgnty qqtprvldvg asylsgltlp raaishlqrl areldettsl cvlegqdily
      121 vervsaprlh qmnvsignrl pawvtsmgrv lianltager edflqgielr sytehtvgsl
      181 eelraelerv aeqgwslvnq eldeglrgla vpvrrgnqll galnvsvqsg radastiset
      241 mlpalfrtak diagdfggrv d
//
LOCUS       WP_258133913             320 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: ROK family protein [unclassified Arthrobacter].
ACCESSION   WP_258133913
VERSION     WP_258133913.1
KEYWORDS    RefSeq.
SOURCE      unclassified Arthrobacter
  ORGANISM  unclassified Arthrobacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012692.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00480.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="unclassified Arthrobacter"
                     /db_xref="taxon:235627"
     Protein         1..320
                     /product="ROK family protein"
                     /calculated_mol_wt=33305
     Region          7..315
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
ORIGIN      
        1 mspanlsigv diggtkilaa lvdeegnafg qirretpdhd vagteralae mirelsegse
       61 alpvgigaag wmdrkgqnvl fsphlswrne pvrdrlmklv ghevtlvnda daagwaehrf
      121 gagrgesdmv cltlgtgigg avilggqihr gksgiagefg hqvivpgghr cacgnrgcwe
      181 qyasgnalgr egaelvrsks pvafrlreav dddpeavtga evtrlaaegd pacadliadm
      241 gewlglgisn lvsvldpgtv viggglgaas kqlvstaeet yrrtlpgrgy rpfakisqae
      301 lgpvagliga adlarfnqqq
//
LOCUS       WP_258133942             326 aa            linear   BCT 02-MAR-2025
DEFINITION  FUSC family protein [Microbacterium sp. MYb45].
ACCESSION   WP_258133942
VERSION     WP_258133942.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb45
  ORGANISM  Microbacterium sp. MYb45
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024905.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13515.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Microbacterium sp. MYb45"
                     /db_xref="taxon:1827294"
     Protein         1..326
                     /product="FUSC family protein"
                     /calculated_mol_wt=33167
     Region          <187..>310
                     /region_name="YccC"
                     /note="Uncharacterized membrane protein YccC [Function
                     unknown]; COG1289"
                     /db_xref="CDD:440900"
ORIGIN      
        1 mddqagltwq warfglgiaf alpamvvapf sptlglalav gvlpaaafrl pprrrgravi
       61 llvgglsaig llvgsllatv pavavvavfg aavlacinav hgrlaqlvli lvlpmigigl
      121 sfpwssaavg lagsmvagsl yawlvsllwp erdgppppaa pvprgramlv yglllgaaaa
      181 iaaavgflld lqhvgwataa vllvmrpvrg qlisrsigra isvlvgafaa aafavfapgd
      241 lviglvagvv vgalcatqgs rwyvapgftt fialtfilvn steqpgarfl eraletllgv
      301 glalffgaav psllsllalr rrspsv
//
LOCUS       WP_258133972             159 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: tetratricopeptide repeat protein [unclassified
            Arthrobacter].
ACCESSION   WP_258133972
VERSION     WP_258133972.1
KEYWORDS    RefSeq.
SOURCE      unclassified Arthrobacter
  ORGANISM  unclassified Arthrobacter
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024100.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12688.13
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="unclassified Arthrobacter"
                     /db_xref="taxon:235627"
     Protein         1..159
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=17128
     Region          42..156
                     /region_name="TPR_5"
                     /note="Tetratrico peptide repeat; pfam12688"
                     /db_xref="CDD:403783"
ORIGIN      
        1 mtgswqerie lfwntagakn pdslrnelaq llaqkpadda ealferaslh dylgeealav
       61 gpyraaiagr lseqklsear iqlastlrnl gevreaiell rmvgpdsslh rdaqaflala
      121 lhdagegsaa lqvalqalap slelyarpvh ayaaelrts
//
LOCUS       WP_258134026             460 aa            linear   BCT 02-MAR-2025
DEFINITION  MULTISPECIES: MBL fold metallo-hydrolase [unclassified
            Microbacterium].
ACCESSION   WP_258134026
VERSION     WP_258134026.1
KEYWORDS    RefSeq.
SOURCE      unclassified Microbacterium
  ORGANISM  unclassified Microbacterium
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 460)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 460)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="unclassified Microbacterium"
                     /db_xref="taxon:2609290"
     Protein         1..460
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=50049
     Region          11..460
                     /region_name="COG1782"
                     /note="Predicted metal-dependent RNase, contains
                     metallo-beta-lactamase and KH domains [General function
                     prediction only]"
                     /db_xref="CDD:441388"
ORIGIN      
        1 mtaatsmsaa tlrflgaadt vtgsrymlst psarilvdcg lfqgykvlre rnraplavpp
       61 rtidavvlth ahldhsgylp alvregyrgs vyasegtasl crimlidsah lleeearhaa
      121 khrwsrhenp tplytvkdae ralerfvvvp egeethiaga ttavlhpagh ilgamsayid
      181 vgerlvcftg dlgrsddplm rpphpfegad ilvtestygn rahspvdpes qlgdvvrrtv
      241 rrngvvlipa favgrtetvl lhlsrlrerg eipdvpiyvn spmaisvadv yrrhpeehrl
      301 sadeverlyd latpvhsvdd skllnlrggp miiisasgml aggrilhhll ayapdkrnai
      361 vltgfqaggt rgarllager tlrvfgrdia vgaevvsids msahadadgi vrwmraaera
      421 pdavyvthge pasadtlrlr ierelgwpar vpdhgeevri
//
LOCUS       WP_258134078             396 aa            linear   BCT 02-MAR-2025
DEFINITION  LysM peptidoglycan-binding domain-containing protein
            [Microbacterium sp. MYb45].
ACCESSION   WP_258134078
VERSION     WP_258134078.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb45
  ORGANISM  Microbacterium sp. MYb45
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 396)
  AUTHORS   Bateman,A. and Bycroft,M.
  TITLE     The structure of a LysM domain from E. coli membrane-bound lytic
            murein transglycosylase D (MltD)
  JOURNAL   J Mol Biol 299 (4), 1113-1119 (2000)
   PUBMED   10843862
REFERENCE   2  (residues 1 to 396)
  AUTHORS   Joris,B., Englebert,S., Chu,C.P., Kariyama,R., Daneo-Moore,L.,
            Shockman,G.D. and Ghuysen,J.M.
  TITLE     Modular design of the Enterococcus hirae muramidase-2 and
            Streptococcus faecalis autolysin
  JOURNAL   FEMS Microbiol Lett 70 (3), 257-264 (1992)
   PUBMED   1352512
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013630.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01476.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Microbacterium sp. MYb45"
                     /db_xref="taxon:1827294"
     Protein         1..396
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /calculated_mol_wt=40374
     Region          <15..108
                     /region_name="XkdP"
                     /note="Cytoplasmic potassium-binding protein
                     Kbp/XkdP/YgaU, contains LysM domain [Inorganic ion
                     transport and metabolism]; COG1652"
                     /db_xref="CDD:441258"
     Region          <66..237
                     /region_name="PRK06347"
                     /note="1,4-beta-N-acetylmuramoylhydrolase"
                     /db_xref="CDD:180536"
ORIGIN      
        1 mrtktatrrt rslqfgvpaa vlgalaatlt aapaeaaatt tdlapverqr stpvrvvpaq
       61 aapasyvvrp gdtvssiasr fglrtvdvlt wnglswrsvi ypgqtltlrt aatapapapa
      121 paaapsashk vvagdtvyai aqkygttvda vlaangltra sviypgqsls vagsaapaaa
      181 paaapasapt paatashtvv agdtvfgiaq kygittqtvf alnglgpssi iypgqklavr
      241 aapvaappaa aaattggqrs atldseqaan asliirvgre lgvpdraial alatgmvesg
      301 lrnldwgdrd slgifqqrps tgwgtpaqim dadrstrvfy ggrndpnghv trglldvagw
      361 esmpftsaaq avqisaypdk ygqwetqays wlalhg
//
LOCUS       WP_258134124             410 aa            linear   BCT 02-MAR-2025
DEFINITION  family 1 glycosylhydrolase [Microbacterium sp. MYb45].
ACCESSION   WP_258134124
VERSION     WP_258134124.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb45
  ORGANISM  Microbacterium sp. MYb45
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012457.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00232.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Microbacterium sp. MYb45"
                     /db_xref="taxon:1827294"
     Protein         1..410
                     /product="family 1 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=46794
     Region          3..366
                     /region_name="BglB"
                     /note="Beta-glucosidase/6-phospho-beta-glucosidase/beta-
                     galactosidase [Carbohydrate transport and metabolism];
                     COG2723"
                     /db_xref="CDD:442035"
ORIGIN      
        1 mnwfedgrlr famgvedtfi pqtrpgeral deyelmqhyr fwsedlgyca dvgsemvrwg
       61 ipwyrvnpap gewdwewldg vidrfdelgi eliadlvhyg tplwledqfv npeypervae
      121 yaaavaeryr grirhytpln epllnimycg efaqwppyrs gdrgfvevlr gisrgivttq
      181 raiaavdpda dfvhveasfr fagdtaahsd thehlrhray ivqdlvmgrv adghplteyl
      241 rengftdedf awaientaip dvvginyypq hstevfeagv vhtggprdlr prldagtegl
      301 adviesfaar yerpvfltet sytgtveeri awmdasiaav edlrgagvdv igytwwcitd
      361 mvewsyrpgv gepmdyrlsm glwaleedad gvlqrhrtpv adaflrhtqa
//
LOCUS       WP_258134136             808 aa            linear   BCT 02-MAR-2025
DEFINITION  glycoside hydrolase family 3 C-terminal domain-containing protein
            [Microbacterium sp. MYb45].
ACCESSION   WP_258134136
VERSION     WP_258134136.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb45
  ORGANISM  Microbacterium sp. MYb45
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 808)
  AUTHORS   Varghese,J.N., Hrmova,M. and Fincher,G.B.
  TITLE     Three-dimensional structure of a barley beta-D-glucan exohydrolase,
            a family 3 glycosyl hydrolase
  JOURNAL   Structure 7 (2), 179-190 (1999)
   PUBMED   10368285
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014026.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01915.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..808
                     /organism="Microbacterium sp. MYb45"
                     /db_xref="taxon:1827294"
     Protein         1..808
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=85091
     Region          11..715
                     /region_name="alph_arabinopyran"
                     /note="exo-alpha-(1->6)-L-arabinopyranosidase; NF041610"
                     /db_xref="CDD:469494"
ORIGIN      
        1 mkettalvas lsllekaall sgantwqtra ieragipavw madgphgvrr qvgsadhlgi
       61 ngsepatcfp taatvagswd delaeeigta lgreassqgv gvllgpglni krsplggrsf
      121 eyfsedpels grlaaayvrg iqsegvaatp khfavnsqel rrmvsdsvid ertlreiylt
      181 afeivvreas pwgimssynl vngayahena hllidilrqe wgfsgavvsd wggsndavaa
      241 aaaggtvemp spgfdsvrqi vaavesgels eadvdaraae vidlvrrvta hprasvdlda
      301 hhalarraaa esavllrndd allplaggts vgligafatv pryqgagssl vnatrvptlv
      361 davgastlkl egvaegfrrd girddelhre avalacraev vvlalglpei aesegldrst
      421 lqlpaeqvrl lrevraanpr tvvvlsaggv vetpwaedaa allhaylggq agaeaiadvl
      481 tgavepggrl aetmplrlad tptagafpsa grtaeyregp fvgyryyeta evpvafpfgf
      541 glgyttfsys elvadaegve vtvtntgdrd gsdvaqlyvs rlgasgvtrp vrelkgyakv
      601 rlaagesrrl ripfgprtfr yfdaaanawq veageyevav gshvrdlpvr atitregatv
      661 sasvdlpaal pttrvddstf aamlgralpd aawgtgplae ndpmdrlata ksplaragfr
      721 lldsrrrkae aagkpdlnil fllngpfrvi skmsgglatr rltaavltlv ngqtirglgr
      781 viaayfggrr dekatkkafd aaatkrsi
//
LOCUS       WP_258134172             409 aa            linear   BCT 02-MAR-2025
DEFINITION  heparan-alpha-glucosaminide N-acetyltransferase domain-containing
            protein [Microbacterium sp. MYb45].
ACCESSION   WP_258134172
VERSION     WP_258134172.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb45
  ORGANISM  Microbacterium sp. MYb45
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 409)
  AUTHORS   Durand,S., Feldhammer,M., Bonneil,E., Thibault,P. and
            Pshezhetsky,A.V.
  TITLE     Analysis of the biogenesis of heparan sulfate
            acetyl-CoA:alpha-glucosaminide N-acetyltransferase provides
            insights into the mechanism underlying its complete deficiency in
            mucopolysaccharidosis IIIC
  JOURNAL   J Biol Chem 285 (41), 31233-31242 (2010)
   PUBMED   20650889
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019403.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07786.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Microbacterium sp. MYb45"
                     /db_xref="taxon:1827294"
     Protein         1..409
                     /product="heparan-alpha-glucosaminide N-acetyltransferase
                     domain-containing protein"
                     /calculated_mol_wt=42633
     Region          1..382
                     /region_name="YeiB"
                     /note="Uncharacterized membrane protein YeiB [Function
                     unknown]; COG2311"
                     /db_xref="CDD:441885"
ORIGIN      
        1 mitaaapvrw frefgrppri lgldvargla ilgmagahig eteafewmdp atwtdlvhgr
       61 ssilfallag vsialmtgrs vlpererlps irlnlvgrga vifliglale mlntpiavil
      121 tlygilyvav ipflrwrpwq lllgaavlal vgpallaflg avmlhpfgtg igfvlygtyp
      181 itvwlalvlg gmalgrmhve rvrtaviala vgivlavvgy glggigqaag lstpaeysss
      241 sfvdgssfse ssfdvsmpng wegypqalea sdplgsvlaa vfavephsgg taevlgsggf
      301 altvialcll lsrplrwvll plgalgsmpl taysahvlsi vlfggpggff ssnefwaata
      361 igllvvttlw smffgrgple rlvgrgaaam alvssptast sdaghrleg
//
LOCUS       WP_258134338             188 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6651 domain-containing protein, partial [Escherichia coli].
ACCESSION   WP_258134338
VERSION     WP_258134338.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042491.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20356.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..188
                     /product="DUF6651 domain-containing protein"
     Region          48..160
                     /region_name="DUF6651"
                     /note="Family of unknown function (DUF6651); pfam20356"
                     /db_xref="CDD:466506"
ORIGIN      
        1 faaiedpkka iealemlski dqkklldagq vdqvkaeitk nfqqqldeek qrsqmlekql
       61 ydsmiggsfa gskyiadkia ipadllqarf gqafkveegr ivaydasgnk iysrakpgel
      121 aqfdealefl venypqkdyi lkasgnnggg srptqhdigq ktmkrsafda ldvagkqnal
      181 kdgitivd
//
LOCUS       WP_258134260             452 aa            linear   BCT 02-MAR-2025
DEFINITION  amidohydrolase family protein [Microbacterium sp. MYb45].
ACCESSION   WP_258134260
VERSION     WP_258134260.1
KEYWORDS    RefSeq.
SOURCE      Microbacterium sp. MYb45
  ORGANISM  Microbacterium sp. MYb45
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (residues 1 to 452)
  AUTHORS   Gao,G., Nara,T., Nakajima-Shimada,J. and Aoki,T.
  TITLE     Novel organization and sequences of five genes encoding all six
            enzymes for de novo pyrimidine biosynthesis in Trypanosoma cruzi
  JOURNAL   J Mol Biol 285 (1), 149-161 (1999)
   PUBMED   9878395
REFERENCE   2  (residues 1 to 452)
  AUTHORS   Holm,L. and Sander,C.
  TITLE     An evolutionary treasure: unification of a broad set of
            amidohydrolases related to urease
  JOURNAL   Proteins 28 (1), 72-82 (1997)
   PUBMED   9144792
REFERENCE   3  (residues 1 to 452)
  AUTHORS   Nygaard,P., Duckert,P. and Saxild,H.H.
  TITLE     Role of adenine deaminase in purine salvage and nitrogen metabolism
            and characterization of the ade gene in Bacillus subtilis
  JOURNAL   J Bacteriol 178 (3), 846-853 (1996)
   PUBMED   8550522
REFERENCE   4  (residues 1 to 452)
  AUTHORS   Lollier,M., Jaquet,L., Nedeva,T., Lacroute,F., Potier,S. and
            Souciet,J.L.
  TITLE     As in Saccharomyces cerevisiae, aspartate transcarbamoylase is
            assembled on a multifunctional protein including a
            dihydroorotase-like cryptic domain in Schizosaccharomyces pombe
  JOURNAL   Curr Genet 28 (2), 138-149 (1995)
   PUBMED   8590465
REFERENCE   5  (residues 1 to 452)
  AUTHORS   Jabri,E., Carr,M.B., Hausinger,R.P. and Karplus,P.A.
  TITLE     The crystal structure of urease from Klebsiella aerogenes
  JOURNAL   Science 268 (5213), 998-1004 (1995)
   PUBMED   7754395
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014081.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01979.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Microbacterium sp. MYb45"
                     /db_xref="taxon:1827294"
     Protein         1..452
                     /product="amidohydrolase family protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=47506
     Region          30..415
                     /region_name="metallo-dependent_hydrolases"
                     /note="Superfamily of metallo-dependent hydrolases (also
                     called amidohydrolase superfamily) is a large group of
                     proteins that show conservation in their 3-dimensional
                     fold (TIM barrel) and in details of their active site. The
                     vast majority of the members have a...; cl00281"
                     /db_xref="CDD:469705"
     Site            order(69,71,211,267,318)
                     /site_type="active"
                     /db_xref="CDD:238617"
ORIGIN      
        1 mtavtvysag lvvpitappi vdgavavrdg rimhvgerew vlrslsergi eadevhwpgv
       61 ltpglvnaht hlqytgmasv grgqydgfdd wvrafdpvye ggrdwaadaa dgaaqalrsg
      121 ttavadvvtd raaatalhda rlhgitywev mswtnadwar tgraqveqal dalptppgtg
      181 lsphapysld ieplleipdi vrerggrihi hlgeaafese fahehpqawh taglasfqel
      241 rkagfgtsat efvdqlgvlg pdchiahgvy msardrailr errttvalcp rsnaviglee
      301 ppiaaylreg spiavgtdsl ssspsldvla dvaelariar sqgytdrdlh arllgaatlg
      361 gahamgidvg pdrtgylavg aladltffdi pagpdavael vehgagraaa tvvsgevrfa
      421 vdsferaave sapaesapae srpvepasgg sa
//
LOCUS       WP_258134343             279 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein, partial [Escherichia coli].
ACCESSION   WP_258134343
VERSION     WP_258134343.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 279)
  AUTHORS   Wang,J., Hofnung,M. and Charbit,A.
  TITLE     The C-terminal portion of the tail fiber protein of bacteriophage
            lambda is responsible for binding to LamB, its receptor at the
            surface of Escherichia coli K-12
  JOURNAL   J Bacteriol 182 (2), 508-512 (2000)
   PUBMED   10629200
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024939.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13550.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>279
                     /product="phage tail protein"
     Region          <3..>266
                     /region_name="COG4733"
                     /note="Phage-related protein, tail protein J [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443767"
ORIGIN      
        1 gapfrysfsa lkdrhnavev nwidpnngwe tatelvedtq aiarygrnvt kmdafgctsr
       61 gqahraglwl iktelletqt vdfsvgaegl rhvpgdviei cdddyagisi ggrvlavnsq
      121 trtltldrei tlpssgttli slvdgsgnpv svevqsvtdr vkvkvsrvpd gvagysvwgl
      181 klptlrqrlf rcvsirendd gtyaitavqh vpekeaivdn gahfdgdqsg tvngvtppav
      241 qhltaevtad sgeyqvlarw dtpkvvkgvs fmlrltvaa
//
LOCUS       WP_258134416            1255 aa            linear   BCT 02-MAR-2025
DEFINITION  LPD7 domain-containing protein [Escherichia coli].
ACCESSION   WP_258134416
VERSION     WP_258134416.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 1255)
  AUTHORS   Iyer,L.M., Burroughs,A.M., Anand,S., de Souza,R.F. and Aravind,L.
  TITLE     Polyvalent Proteins, a Pervasive Theme in the Intergenomic
            Biological Conflicts of Bacteriophages and Conjugative Elements
  JOURNAL   J Bacteriol 199 (15), e00245-17 (2017)
   PUBMED   28559295
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 1255)
  AUTHORS   Maindola,P., Raina,R., Goyal,P., Atmakuri,K., Ojha,A., Gupta,S.,
            Christie,P.J., Iyer,L.M., Aravind,L. and Arockiasamy,A.
  TITLE     Multiple enzymatic activities of ParB/Srx superfamily mediate
            sexual conflict among conjugative plasmids
  JOURNAL   Nat Commun 5, 5322 (2014)
   PUBMED   25358815
  REMARK    Publication Status: Online-Only
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF037421.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF18821.6
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1255
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..1255
                     /product="LPD7 domain-containing protein"
                     /calculated_mol_wt=137798
     Region          8..59
                     /region_name="DUF5710"
                     /note="Domain of unknown function (DUF5710); cl46755"
                     /db_xref="CDD:481095"
     Region          71..>384
                     /region_name="COG4643"
                     /note="Uncharacterized domain associated with
                     phage/plasmid primase [Mobilome: prophages, transposons]"
                     /db_xref="CDD:443681"
     Region          <398..782
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          779..861
                     /region_name="LPD7"
                     /note="Large polyvalent protein-associated domain 7;
                     pfam18821"
                     /db_xref="CDD:465879"
     Region          844..>936
                     /region_name="COG5373"
                     /note="Uncharacterized membrane protein [Function
                     unknown]"
                     /db_xref="CDD:444140"
ORIGIN      
        1 mpsvsryrtw lavpadeied lkkahppmng htpviwdkeh klwfarpgad lsrldrwlpr
       61 pqdvsmngse pvtefaqvle naglvlkelp vmdgkihrvp taddkkgqks gayrgfldgr
      121 pagwyrdyrs addspitwtf sggeqtdpra rlhlkahsmq rredaerelk aqynrqaaya
      181 rryvnkwpqa taheyltrkg iqaapgvrvn nknelvipfs nrngairsyq ripvtggkda
      241 rilkdsektg nwfalgtprn gqpvlfaegy ataaslheat glpvlmtvdg gnmiavaena
      301 rqkwtqspfi fcadndhair vnkgivsatk aaeltggtvi fpaftdaeka qgltdfndld
      361 asrgraafqh vinaqlehig vstpnsntpe irealvignl vftpvhteek tmtpteypet
      421 spdtghshdq gpslpsatqq eqpaasssni adetqsftsh atenngkder hadnvqaqte
      481 ssvvqdspae spaspestta sapdepahpa eppekvvsva tdkdwrefea elsqpeknes
      541 qqesgtspei papaaapasp edspssetmn esaepspspd avkeemtvmt epddkqstgi
      601 spdtpreeav nhvtediplq pepflpesdg peeyenysay qelmnnenpe hlqensdmps
      661 qpdtdhvqad eselqattdt aepavrdept pqqpvqstsp sdntssfldk argfftrkkt
      721 dsqahensdp tpsaettttp pipdsivyap ersdapisln mdeilkeldw ekradrtvly
      781 kldgkpafid rvnrlemvng asnddrsvla alavatkfyg gvieltgsda fkqkamqlii
      841 ehnidvrmkl pdqraelekl rkemavskda vvthkptpel nrnipeqpav pdpvqekeat
      901 qspaspaape astvstvpas spaepgktad aapgeeppgk lrpgesvtav lhnfgraeya
      961 pgkgesffve lknrsgskly wgeqleslvk nhqkgdvvtl tlqnreqfil pgeqkarfrn
     1021 kwsmesvtng isvshdnpdk gqriqaipve tfmkvaaqis qgwpeemkal rmpenvgshl
     1081 figedrhpvs apqnanqvte itsaapdklt pvlgsvdkdt relnlllvqs adehlqgvvr
     1141 lngtlypala tpsadnsqlv inaltdkglr fagygeavnh dadstnrpap elmqfhlktr
     1201 eeplfaavyt pekqpdalyr nlgfeqswqq wsnsqkpedr qektlhqdls hspgr
//
LOCUS       WP_258134481             187 aa            linear   BCT 02-MAR-2025
DEFINITION  methyltransferase [Escherichia coli].
ACCESSION   WP_258134481
VERSION     WP_258134481.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF017026.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF05175.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..187
                     /product="methyltransferase"
                     /GO_function="GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=21072
     Region          32..183
                     /region_name="HsdM"
                     /note="Type I restriction-modification system, DNA
                     methylase subunit [Defense mechanisms]; COG0286"
                     /db_xref="CDD:440055"
ORIGIN      
        1 mhsqlrerir lmrarldnar pvieipaefq lfvtpapvcd rlvtlaeisn hdhilepsag
       61 tgailraird tapgamcdav einnglvryl renfngvrvq cgdfmewqpv qyysriimnp
      121 pfshgqdirh ilrafsllrp ggvlvavcln gprqqekllp fsdvreelpc gtfaytrvpt
      181 miirlra
//
LOCUS       WP_258134490             185 aa            linear   BCT 02-MAR-2025
DEFINITION  bacteriophage antitermination protein Q, partial [Escherichia
            coli].
ACCESSION   WP_258134490
VERSION     WP_258134490.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 185)
  AUTHORS   Goliger,J.A. and Roberts,J.W.
  TITLE     Bacteriophage 82 gene Q and Q protein. Sequence, overproduction,
            and activity as a transcription antiterminator in vitro
  JOURNAL   J Biol Chem 262 (24), 11721-11725 (1987)
   PUBMED   3624233
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018074.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06323.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..185
                     /product="bacteriophage antitermination protein Q"
     Region          1..182
                     /region_name="Phage_antiter_Q"
                     /note="Phage antitermination protein Q; pfam06323"
                     /db_xref="CDD:428887"
ORIGIN      
        1 fdtgryrrkk iryrdevtgk mitrdnppip gkqslakgss ialvspvefs tsswrravls
       61 leehhkawlq wcysgsicwd hqiaitqwaw tefnaqsgtr kiagktlvrl ktliwlaaqa
      121 vkaelfggeg yeyqelallv gvttknwskt ftghwvamkh ifhrldseal llvegtrskq
      181 kaafs
//
LOCUS       WP_258134503             193 aa            linear   BCT 02-MAR-2025
DEFINITION  bacteriophage antitermination protein Q, partial [Escherichia
            coli].
ACCESSION   WP_258134503
VERSION     WP_258134503.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 193)
  AUTHORS   Goliger,J.A. and Roberts,J.W.
  TITLE     Bacteriophage 82 gene Q and Q protein. Sequence, overproduction,
            and activity as a transcription antiterminator in vitro
  JOURNAL   J Biol Chem 262 (24), 11721-11725 (1987)
   PUBMED   3624233
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF018074.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF06323.16
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..193
                     /product="bacteriophage antitermination protein Q"
     Region          1..183
                     /region_name="Phage_antiter_Q"
                     /note="Phage antitermination protein Q; pfam06323"
                     /db_xref="CDD:428887"
ORIGIN      
        1 fdtgryrrkk iryrdevtgk mitrdnppiq gkqslakgss ialvspvefa tsswrralle
       61 leehqkawll wcyggnicwe hqiaitqwvw sefktqsgsr kiavktlerv kkliwlaaqd
      121 vrgwvtgcev yqrqelarlc gvkpdnwshn yanywremcd ifkrldresl icsvkiraqq
      181 katfsrrdia kvn
//
LOCUS       WP_258134516             169 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein, partial [Escherichia coli].
ACCESSION   WP_258134516
VERSION     WP_258134516.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 169)
  AUTHORS   Wang,J., Hofnung,M. and Charbit,A.
  TITLE     The C-terminal portion of the tail fiber protein of bacteriophage
            lambda is responsible for binding to LamB, its receptor at the
            surface of Escherichia coli K-12
  JOURNAL   J Bacteriol 182 (2), 508-512 (2000)
   PUBMED   10629200
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024939.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13550.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>169
                     /product="phage tail protein"
     Region          <1..>169
                     /region_name="COG4733"
                     /note="Phage-related protein, tail protein J [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443767"
ORIGIN      
        1 qtstelvedp dailrygrnl lkmdafgcts rgqahraglw viktelletq tvdftlgsqg
       61 lrhtpgdiie icdndyagtl tggrilsida asrtltldre vtlpetgtst vnlingsgkp
      121 vrvditaqpa pdriqvsilp dgvatygvwg lslpslrrrl frcvsiren
//
LOCUS       WP_258134517             169 aa            linear   BCT 02-MAR-2025
DEFINITION  phage tail protein, partial [Escherichia coli].
ACCESSION   WP_258134517
VERSION     WP_258134517.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 169)
  AUTHORS   Wang,J., Hofnung,M. and Charbit,A.
  TITLE     The C-terminal portion of the tail fiber protein of bacteriophage
            lambda is responsible for binding to LamB, its receptor at the
            surface of Escherichia coli K-12
  JOURNAL   J Bacteriol 182 (2), 508-512 (2000)
   PUBMED   10629200
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024939.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13550.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..>169
                     /product="phage tail protein"
     Region          <1..>169
                     /region_name="COG4733"
                     /note="Phage-related protein, tail protein J [Mobilome:
                     prophages, transposons]"
                     /db_xref="CDD:443767"
ORIGIN      
        1 qtstelvedp dailrygrnl lkmdafgcts rgqahraglw viktelletq tvdftlgsqg
       61 lrhtpgdiie icdndyagtl tggrilsmda asrtltldre atlpetgtst vnlingsgkp
      121 vrvditahpa pdriqvsvlp dgvetygvwg lslpslrrrl frcvsiren
//
LOCUS       WP_258134575            1093 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF5107 domain-containing protein [Escherichia coli].
ACCESSION   WP_258134575
VERSION     WP_258134575.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028438.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17128.10
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         1..1093
                     /product="DUF5107 domain-containing protein"
                     /calculated_mol_wt=123858
     Region          40..343
                     /region_name="DUF5107"
                     /note="Domain of unknown function (DUF5107); pfam17128"
                     /db_xref="CDD:407262"
     Region          468..702
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          495..523
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(496,499..500,503..504,506,536,539..540,543..544,
                     546..547,570,573..574,577..578,581)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          534..564
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          569..597
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          603..631
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          746..772
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          749..>961
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          777..808
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mtpvkvwqer veiptyetgp qdihpmflen rvyqgssgav ypygvtdtls eqktlkswqa
       61 vwlendyikv milpelggrv hrawdkvkqr dfvyhnevik palvgllgpw isggiefnwp
      121 qhhrpttfmp vdftleahed gaqtvwvget epmhglqvmt gftlrpdraa leiasrvyng
      181 natprhflww anpavkggeg hqsvfppdvt avfdhgkrav safpiatgty ykvdysagvd
      241 isryknvpvp tsymaeksqy dfvgawchde dggllhvanh hiapgkkqws wghsefgqaw
      301 dksltdnngp yielmtgifa dnqpdftwld ayeekrfeqy flpyhslgmv qnasrdavik
      361 lqrsergiew glyaisplkg yrlaireigk cnallddava ltpataiqgv lhginperlt
      421 ielsdadgni tlsyqehqpq elplpdvaka plaaqditst deawfigqhl eqyhhasrsp
      481 fdyylrgval dpldyrcnla lamleynrad fpqavayatq alkrahalnk npqcgqasli
      541 rasayerqgq yqqaeedfwr avwsgnskag gyyglarlaa rnghfdagld fcqqslracp
      601 tnqevlclhn lllvlsgrqd narlqrekll rdyplnatlw wlnwfdgrse saftqwrglc
      661 qgrdvnalmt agqlinwgmp tlaaemlnal dcqrtlplyl qasllpkaer gelvtkaidv
      721 fpqfvrfpnt leevaalesi eecwfarhll acfyynkrsy nkaitlwqrc vemspefadg
      781 wrglaihawn kqhdyelaar yldnayqlas qdarllferd lldklsgatp ekrlarlenn
      841 leialkrddm taellnlwhl tgqadkaadi latrkfhpwe ggegkvtsqf ilnqllrawq
      901 hldarepqqa sellhaalhy penlsegrlp gqtdndiwfw qaicanaqgd eteatrclrl
      961 aatgdrtini hsyyndqpvd ylfwqgmalr llgeqqtaqq lfsemkqwaq emaktsiead
     1021 ffavsqpdll slygdlqqqh kekclmvaml asaglgevah yesaraelta inpawpkaal
     1081 fttvmpfifn rvh
//
LOCUS       WP_258134675              80 aa            linear   BCT 02-MAR-2025
DEFINITION  S24 family peptidase [Cronobacter sakazakii].
ACCESSION   WP_258134675
VERSION     WP_258134675.1
KEYWORDS    RefSeq.
SOURCE      Cronobacter sakazakii
  ORGANISM  Cronobacter sakazakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (residues 1 to 80)
  AUTHORS   Bell,C.E., Frescura,P., Hochschild,A. and Lewis,M.
  TITLE     Crystal structure of the lambda repressor C-terminal domain
            provides a model for cooperative operator binding
  JOURNAL   Cell 101 (7), 801-811 (2000)
   PUBMED   10892750
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012920.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00717.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Cronobacter sakazakii"
                     /db_xref="taxon:28141"
     Protein         1..80
                     /product="S24 family peptidase"
                     /calculated_mol_wt=8594
     Region          <6..70
                     /region_name="Peptidase_S24_S26"
                     /note="The S24, S26 LexA/signal peptidase superfamily
                     contains LexA-related and type I signal peptidase
                     families. The S24 LexA protein domains include: the lambda
                     repressor CI/C2 family and related bacterial prophage
                     repressor proteins; LexA (EC 3.4.21.88), the...; cl10465"
                     /db_xref="CDD:447902"
ORIGIN      
        1 mpgvslllvd fslhakhndi mvasiggeft ikrlvtypva qlraenpayp piavydaddl
       61 eivgvvicvi ntlhrnvrpg
//
LOCUS       WP_258134339             383 aa            linear   BCT 02-MAR-2025
DEFINITION  tail fiber protein, partial [Escherichia coli].
ACCESSION   WP_258134339
VERSION     WP_258134339.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 383)
  AUTHORS   Yu,S.L., Ko,K.L., Chen,C.S., Chang,Y.C. and Syu,W.J.
  TITLE     Characterization of the distal tail fiber locus and determination
            of the receptor for phage AR1, which specifically infects
            Escherichia coli O157:H7
  JOURNAL   J Bacteriol 182 (21), 5962-5968 (2000)
   PUBMED   11029414
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024018.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF12604.14
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..383
                     /product="tail fiber protein"
ORIGIN      
        1 seslaatpka vkaacenaek rlqkdkngad vpdkdtftkn igacrafgga vstttgdwtt
       61 aqfigwldsq gafnhpywmc kgswsygnnk iitdtgcgni hlagavievm giksamtiri
      121 ttpttssgsg tanaqftyin hgdgyspgwr rdyntknkpp afalgktget ladtdavawn
      181 ldsgaycaqd ggasslilhf ntgegscpav qfrvnyrngg ifyrsardgy gfeadwerlf
      241 tttggtldga vgigaqntlg ghslalgrgd tglkqngdgn ldvyagnarv mrftngsiqv
      301 skglnvsgrv npsdysnfdi ryvrdirlgt rvvqgmqkgv tyeksghvit glclvgdadg
      361 dnsavyrpvq kyingtwfnv sqv
//
LOCUS       WP_258134736             273 aa            linear   BCT 02-MAR-2025
DEFINITION  uroporphyrinogen-III synthase [Mycoavidus sp. HKI].
ACCESSION   WP_258134736
VERSION     WP_258134736.1
KEYWORDS    RefSeq.
SOURCE      Mycoavidus sp. HKI
  ORGANISM  Mycoavidus sp. HKI
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Mycoavidus.
REFERENCE   1  (residues 1 to 273)
  AUTHORS   Xu,W., Astrin,K.H. and Desnick,R.J.
  TITLE     Molecular basis of congenital erythropoietic porphyria: mutations
            in the human uroporphyrinogen III synthase gene
  JOURNAL   Hum Mutat 7 (3), 187-192 (1996)
   PUBMED   8829650
REFERENCE   2  (residues 1 to 273)
  AUTHORS   Amillet,J.M. and Labbe-Bois,R.
  TITLE     Isolation of the gene HEM4 encoding uroporphyrinogen III synthase
            in Saccharomyces cerevisiae
  JOURNAL   Yeast 11 (5), 419-424 (1995)
   PUBMED   7597845
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014641.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02602.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Mycoavidus sp. HKI"
                     /db_xref="taxon:2840467"
     Protein         1..273
                     /product="uroporphyrinogen-III synthase"
                     /EC_number="4.2.1.75"
                     /GO_function="GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA]"
                     /GO_process="GO:0033014 - tetrapyrrole biosynthetic
                     process [Evidence IEA]"
                     /calculated_mol_wt=28972
     Region          9..>269
                     /region_name="PRK06975"
                     /note="bifunctional uroporphyrinogen-III
                     synthetase/uroporphyrin-III C-methyltransferase; Reviewed"
                     /db_xref="CDD:235899"
ORIGIN      
        1 mplqamtrta vltgsrgqsv sllqalavag meafefplie ifstndhtll akafavleqy
       61 alvifvspaa iefasahlpl qwpamvpiav vgpgsvralk qygiaaplqr viapaqrsad
      121 qavrydseal aaaldqtlgl aslngrsvli vrgdsgrewl adtlraegaq ievvsayrra
      181 lpvptlaqwt rvrallagep hawlltssqg vrnlerlaqa hlseaeqsal krspiivpha
      241 riaecadaag fvtitqchag desiarallf sts
//
LOCUS       WP_258134788             122 aa            linear   BCT 02-MAR-2025
DEFINITION  IS66 family transposase, partial [Escherichia coli].
ACCESSION   WP_258134788
VERSION     WP_258134788.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 122)
  AUTHORS   Schwedock,J. and Long,S.R.
  TITLE     An open reading frame downstream of Rhizobium meliloti nodQ1 shows
            nucleotide sequence similarity to an Agrobacterium tumefaciens
            insertion sequence
  JOURNAL   Mol Plant Microbe Interact 7 (1), 151-153 (1994)
   PUBMED   8167368
REFERENCE   2  (residues 1 to 122)
  AUTHORS   Machida,Y., Sakurai,M., Kiyokawa,S., Ubasawa,A., Suzuki,Y. and
            Ikeda,J.E.
  TITLE     Nucleotide sequence of the insertion sequence found in the T-DNA
            region of mutant Ti plasmid pTiA66 and distribution of its
            homologues in octopine Ti plasmid
  JOURNAL   Proc Natl Acad Sci U S A 81 (23), 7495-7499 (1984)
   PUBMED   6095299
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF015038.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF03050.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Escherichia coli"
                     /db_xref="taxon:562"
     Protein         <1..122
                     /product="IS66 family transposase"
     Region          <1..99
                     /region_name="transpos_IS66"
                     /note="IS66 family transposase; NF033517"
                     /db_xref="CDD:468053"
ORIGIN      
        1 hewmvekngt lskksrlgea fsyvlnqwda lcyysddgla eadnnaaera lravclgkkn
       61 yvffgsdhgg ergavlygli gtcrlngidp eaylrhilsv lpewpsnrvd ellpwnvvlt
      121 nk
//
LOCUS       WP_258134797             251 aa            linear   BCT 02-MAR-2025
DEFINITION  peptidoglycan-binding protein [Mucilaginibacter
            phenanthrenivorans].
ACCESSION   WP_258134797
VERSION     WP_258134797.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter phenanthrenivorans
  ORGANISM  Mucilaginibacter phenanthrenivorans
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
REFERENCE   1  (residues 1 to 251)
  AUTHORS   Briers,Y., Volckaert,G., Cornelissen,A., Lagaert,S., Michiels,C.W.,
            Hertveldt,K. and Lavigne,R.
  TITLE     Muralytic activity and modular structure of the endolysins of
            Pseudomonas aeruginosa bacteriophages phiKZ and EL
  JOURNAL   Mol Microbiol 65 (5), 1334-1344 (2007)
   PUBMED   17697255
REFERENCE   2  (residues 1 to 251)
  AUTHORS   Gooley,P.R., O'Connell,J.F., Marcy,A.I., Cuca,G.C., Salowe,S.P.,
            Bush,B.L., Hermes,J.D., Esser,C.K., Hagmann,W.K., Springer,J.P. et
            al.
  TITLE     The NMR structure of the inhibited catalytic domain of human
            stromelysin-1
  JOURNAL   Nat Struct Biol 1 (2), 111-118 (1994)
   PUBMED   7656014
REFERENCE   3  (residues 1 to 251)
  AUTHORS   Foster,S.J.
  TITLE     Cloning, expression, sequence analysis and biochemical
            characterization of an autolytic amidase of Bacillus subtilis 168
            trpC2
  JOURNAL   J Gen Microbiol 137 (8), 1987-1998 (1991)
   PUBMED   1683402
REFERENCE   4  (residues 1 to 251)
  AUTHORS   Dideberg,O., Charlier,P., Dive,G., Joris,B., Frere,J.M. and
            Ghuysen,J.M.
  TITLE     Structure of a Zn2+-containing D-alanyl-D-alanine-cleaving
            carboxypeptidase at 2.5 A resolution
  JOURNAL   Nature 299 (5882), 469-470 (1982)
   PUBMED   7121588
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013625.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01471.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Mucilaginibacter phenanthrenivorans"
                     /db_xref="taxon:1234842"
     Protein         1..251
                     /product="peptidoglycan-binding protein"
                     /calculated_mol_wt=26984
     Region          <18..76
                     /region_name="PGRP"
                     /note="Peptidoglycan-binding (PGRP) domain of
                     peptidoglycan hydrolases [Cell wall/membrane/envelope
                     biogenesis]; COG3409"
                     /db_xref="CDD:442635"
     Region          137..220
                     /region_name="CHAP"
                     /note="CHAP domain; pfam05257"
                     /db_xref="CDD:461605"
ORIGIN      
        1 mdypghtiql qafditsvka iqqqlnikgc gplkingdyd ldtshavmlf qtrfndvngt
       61 pldadgvvgp itwaalfgtk niqsitkapn illstvldva rsqigvvefp sgsnegpgvs
      121 kyqdavniah gqrwslafvy wcfsqactkl evnnpvfktg dviqgwlkak gklltnhdak
      181 vntslvlpgq vffistgggh ghaglverne sgllttiegn icvdssdgai gvfrrkgryi
      241 dtintgfiqf e
//
LOCUS       WP_258134889             276 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6263 family protein [Mucilaginibacter phenanthrenivorans].
ACCESSION   WP_258134889
VERSION     WP_258134889.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter phenanthrenivorans
  ORGANISM  Mucilaginibacter phenanthrenivorans
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF039709.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19777.4
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Mucilaginibacter phenanthrenivorans"
                     /db_xref="taxon:1234842"
     Protein         1..276
                     /product="DUF6263 family protein"
                     /calculated_mol_wt=30586
     Region          78..239
                     /region_name="DUF6263"
                     /note="Family of unknown function (DUF6263); pfam19777"
                     /db_xref="CDD:466181"
ORIGIN      
        1 mklsftiiks llilslllii stsdaqtvhr dfrfkkgdef erqlavksnc vmqrgsqkln
       61 istysavtkt ykindvvngn atihitfnkv idsinalgrn vnfnsdktpd pnsdiqmsly
      121 qligksaivs adskgtilav kkrepvsdtl maftgiqsen lspnnqlefl ldfpaspflk
      181 kgytwtdvsp vnnvynttyt iyavtgrttt ityktsilkd amntringvm lidndsgvvl
      241 krsmqsvttg yeeikgviyt virrsassev cykktn
//
LOCUS       WP_258134936             446 aa            linear   BCT 02-MAR-2025
DEFINITION  oligosaccharide flippase family protein [Mucilaginibacter
            phenanthrenivorans].
ACCESSION   WP_258134936
VERSION     WP_258134936.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter phenanthrenivorans
  ORGANISM  Mucilaginibacter phenanthrenivorans
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024832.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13440.11
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Mucilaginibacter phenanthrenivorans"
                     /db_xref="taxon:1234842"
     Protein         1..446
                     /product="oligosaccharide flippase family protein"
                     /calculated_mol_wt=50216
     Region          15..411
                     /region_name="MATE_like"
                     /note="Multidrug and toxic compound extrusion family and
                     similar proteins; cl09326"
                     /db_xref="CDD:447704"
ORIGIN      
        1 msiakklink htlslasnav mpvvgmvtvg llarsmsvea fgdwsfflit ftlanltrsg
       61 flqtslvkfy agatkeqadm vagstwflgf vitatlgffs lialifyhgh qtteitikwf
      121 aiiyfstlps svalwilqae erfdkifilq liwqgtflll iivlmilheg sfqviiyayf
      181 tavvitslys ittgwariss issrkwecir elanfgkysv gtsissyllr ssdnfiikfm
      241 fadpafigiy ylpqrlmeii evplrsfiat ampamsaavn rddknyityi lkkysgilti
      301 liipvslasi lfadiiidvl gghkylhtna snifrifmcf avllpvdrff gitldilnkp
      361 kinmikviim lvvnvigdfv giyffhslya valasiftfl agviygywvl rkylnftmfg
      421 iitmgfietk aliaelilky knrntk
//
LOCUS       WP_258134998             463 aa            linear   BCT 02-MAR-2025
DEFINITION  MBL fold metallo-hydrolase [Mucilaginibacter phenanthrenivorans].
ACCESSION   WP_258134998
VERSION     WP_258134998.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter phenanthrenivorans
  ORGANISM  Mucilaginibacter phenanthrenivorans
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
REFERENCE   1  (residues 1 to 463)
  AUTHORS   Neuwald,A.F., Liu,J.S., Lipman,D.J. and Lawrence,C.E.
  TITLE     Extracting protein alignment models from the sequence database
  JOURNAL   Nucleic Acids Res 25 (9), 1665-1677 (1997)
   PUBMED   9108146
REFERENCE   2  (residues 1 to 463)
  AUTHORS   Carfi,A., Pares,S., Duee,E., Galleni,M., Duez,C., Frere,J.M. and
            Dideberg,O.
  TITLE     The 3-D structure of a zinc metallo-beta-lactamase from Bacillus
            cereus reveals a new type of protein fold
  JOURNAL   EMBO J 14 (20), 4914-4921 (1995)
   PUBMED   7588620
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012955.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00753.33
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Mucilaginibacter phenanthrenivorans"
                     /db_xref="taxon:1234842"
     Protein         1..463
                     /product="MBL fold metallo-hydrolase"
                     /calculated_mol_wt=52024
     Region          1..463
                     /region_name="COG1782"
                     /note="Predicted metal-dependent RNase, contains
                     metallo-beta-lactamase and KH domains [General function
                     prediction only]"
                     /db_xref="CDD:441388"
ORIGIN      
        1 mkltiygaar qvtgsmhlle vgkfkilidc gldyekdrni qanenfpfkp edidvvilth
       61 ahidhsgnlp tlvrlgfngq ilctpptadl telllldsvn ifmrkadkgr khrkgkfntg
      121 iqplylqkhv mdtvdrfvti gfdrpfring dieltfisvg hllgaaaaif kvndngeeks
      181 iaftgdigrk nypvledpqe lpqvdylvte styggrlhtk dktveqtlve viekacikeq
      241 grmiipafsi grtqslvyal nkiftsgllp pvkvfvdspl atrstevfrk yhylvndeaq
      301 efyqkkgdef efenlvyves lkdsrqvsny yepciiissa gmleggriqd hlfyniqnyy
      361 ctilfigyca kgtlghrllr gdsivhikdr dlavyatikq tdvlsahgdh edlvntvkqq
      421 dkaklknvfl vhgevtsmqa ladalevegy pvtipekgls yll
//
LOCUS       WP_258135018             192 aa            linear   BCT 02-MAR-2025
DEFINITION  outer membrane beta-barrel protein [Mucilaginibacter
            phenanthrenivorans].
ACCESSION   WP_258135018
VERSION     WP_258135018.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter phenanthrenivorans
  ORGANISM  Mucilaginibacter phenanthrenivorans
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024895.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13505.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Mucilaginibacter phenanthrenivorans"
                     /db_xref="taxon:1234842"
     Protein         1..192
                     /product="outer membrane beta-barrel protein"
                     /calculated_mol_wt=20616
ORIGIN      
        1 mknttmknlt kllasalfav ailfgtnvka qtitpnkfrf glgveggivt gdahdfsnle
       61 lggtarvqyg ltptvaltlt sgyynffgkt vpglnekyqs lgmvpikagv kyfftqnlyl
      121 ageagvgiet ktfayqgepd nldsqtntkl lltpgigyan khwdvgvrye nysgqdvnyg
      181 ivglrvaygf gl
//
LOCUS       WP_258135021             146 aa            linear   BCT 02-MAR-2025
DEFINITION  NUDIX domain-containing protein [Mucilaginibacter
            phenanthrenivorans].
ACCESSION   WP_258135021
VERSION     WP_258135021.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter phenanthrenivorans
  ORGANISM  Mucilaginibacter phenanthrenivorans
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012514.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00293.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Mucilaginibacter phenanthrenivorans"
                     /db_xref="taxon:1234842"
     Protein         1..146
                     /product="NUDIX domain-containing protein"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /calculated_mol_wt=16633
     Region          6..145
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
ORIGIN      
        1 mypfnvrvyg ilindanevl isdeqeygmq ftkfpgggle fgeglidglk refveecnin
       61 vevvshfytt dffvksafne sqivsvyyvv knvdpinfai ktvqfdfdgd gevlqsfrlv
      121 kldelqpdef ifptdkhvvk llinni
//
LOCUS       WP_258135151             323 aa            linear   BCT 02-MAR-2025
DEFINITION  ion channel [Mucilaginibacter phenanthrenivorans].
ACCESSION   WP_258135151
VERSION     WP_258135151.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter phenanthrenivorans
  ORGANISM  Mucilaginibacter phenanthrenivorans
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
REFERENCE   1  (residues 1 to 323)
  AUTHORS   Choe,S.
  TITLE     Potassium channel structures
  JOURNAL   Nat Rev Neurosci 3 (2), 115-121 (2002)
   PUBMED   11836519
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019500.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07885.22
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Mucilaginibacter phenanthrenivorans"
                     /db_xref="taxon:1234842"
     Protein         1..323
                     /product="ion channel"
                     /calculated_mol_wt=36379
     Region          70..148
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          178..306
                     /region_name="IRK_C"
                     /note="Inward rectifier potassium channel C-terminal
                     domain; pfam17655"
                     /db_xref="CDD:465439"
ORIGIN      
        1 makserkinp eddlgfgpqp viknqplmnk dgspnvrrvg lpffntanny htlitmswrk
       61 fwllvitcyl lvniifafiy msfgpngldg tsgnttfnhf mdsfffsaqt mstvgyghis
      121 pkgmgtnsva alesmmglla falatgllyg rfsrpsaqiv ysknilvapy mgtgrgimfr
      181 lanlrrnmli dleieiifsy netvdgkttr rfyplevers kvsvltlnwt vvhpldensp
      241 midmskedmi kseagfaill rafddtfsqt vhsrtqyqgh eiiwgakfkp vfdrdemgri
      301 vldlskisdy dmfelekvge avg
//
LOCUS       WP_258135132             118 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF7009 family protein [Mucilaginibacter phenanthrenivorans].
ACCESSION   WP_258135132
VERSION     WP_258135132.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter phenanthrenivorans
  ORGANISM  Mucilaginibacter phenanthrenivorans
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF046888.2
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF22668.1
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Mucilaginibacter phenanthrenivorans"
                     /db_xref="taxon:1234842"
     Protein         1..118
                     /product="DUF7009 family protein"
                     /calculated_mol_wt=13350
ORIGIN      
        1 mkiriksnsi ryrltksdva alvkngrled svdfglqklv yeiqivedye lsatfnnsti
       61 tlfmpkkmid elantdkvgf esarhplhll vekdftcldn vaedqsdnyp nplaektl
//
LOCUS       WP_258135159             652 aa            linear   BCT 02-MAR-2025
DEFINITION  redoxin domain-containing protein [Mucilaginibacter
            phenanthrenivorans].
ACCESSION   WP_258135159
VERSION     WP_258135159.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter phenanthrenivorans
  ORGANISM  Mucilaginibacter phenanthrenivorans
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
REFERENCE   1  (residues 1 to 652)
  AUTHORS   Chae,H.Z., Robison,K., Poole,L.B., Church,G., Storz,G. and
            Rhee,S.G.
  TITLE     Cloning and sequencing of thiol-specific antioxidant from mammalian
            brain: alkyl hydroperoxide reductase and thiol-specific antioxidant
            define a large family of antioxidant enzymes
  JOURNAL   Proc Natl Acad Sci U S A 91 (15), 7017-7021 (1994)
   PUBMED   8041738
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012787.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00578.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Mucilaginibacter phenanthrenivorans"
                     /db_xref="taxon:1234842"
     Protein         1..652
                     /product="redoxin domain-containing protein"
                     /GO_function="GO:0016209 - antioxidant activity [Evidence
                     IEA]"
                     /GO_function="GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /calculated_mol_wt=72200
     Region          308..432
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          480..627
                     /region_name="TrxA"
                     /note="Thiol-disulfide isomerase or thioredoxin
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG0526"
                     /db_xref="CDD:440292"
ORIGIN      
        1 mktmktllll pgvlvmhfai aqteshvkls sdypspgeki tmtydptgtv vdgkkditas
       61 vfyldnkdyp vadidlkpng klltgdltip ataksffiki ssgsdvdann dkgytylvyk
      121 dkqpvagaya mngnllasgm gqyfakiktd avagmelykk efalhpdtkk dyeasyyymi
      181 arkpeykaev seeiksleks sdekdlmmav nllnmtkssg adslntivkn kfpdgltvkn
      241 elstsfykek dvakkdsiyn vyikkypedk sekhpiqdnl rvqlanaylt kgditnydrv
      301 aaqvknksnl amglnntayq waekgehmdd aaklskqsld ivaediknpv amaysspsqa
      361 kknyeesydm yadtyayilm kqnkfaealk yeqpvvdhak atdpevaehy vqilgalgqn
      421 akafeyaena ikdakgtavl kdefkknyik vkgsdkgyde yfsaleaaak akaiaelakt
      481 minqpspafa lkdldgntvs ladlkgkvvi vdfwatwcgp ckasfpgmqm avnkfkdnpn
      541 vkflfidvwe tgsnyvdgvk kfiadnkytf hvlidektes gkqdkvvstf kvdgiptkfi
      601 idkagnirfk yvgysgtpek vlnevinmvd iagnpeayas aqkttepksg sk
//
LOCUS       WP_258135243              76 aa            linear   BCT 02-MAR-2025
DEFINITION  4a-hydroxytetrahydrobiopterin dehydratase [Mucilaginibacter
            phenanthrenivorans].
ACCESSION   WP_258135243
VERSION     WP_258135243.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter phenanthrenivorans
  ORGANISM  Mucilaginibacter phenanthrenivorans
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
REFERENCE   1  (residues 1 to 76)
  AUTHORS   Cronk,J.D., Endrizzi,J.A. and Alber,T.
  TITLE     High-resolution structures of the bifunctional enzyme and
            transcriptional coactivator DCoH and its complex with a product
            analogue
  JOURNAL   Protein Sci 5 (10), 1963-1972 (1996)
   PUBMED   8897596
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013494.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01329.24
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Mucilaginibacter phenanthrenivorans"
                     /db_xref="taxon:1234842"
     Protein         1..76
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /EC_number="4.2.1.96"
                     /GO_function="GO:0008124 -
                     4-alpha-hydroxytetrahydrobiopterin dehydratase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006729 - tetrahydrobiopterin biosynthetic
                     process [Evidence IEA]"
                     /calculated_mol_wt=8663
     Region          7..75
                     /region_name="PCD_DCoH"
                     /note="The bifunctional protein
                     pterin-4alpha-carbinolamine dehydratase (PCD), also known
                     as DCoH (dimerization cofactor of hepatocyte nuclear
                     factor-1), is both a transcription activator and a
                     metabolic enzyme. DCoH stimulates gene expression by
                     associating...; cl00942"
                     /db_xref="CDD:470002"
     Site            order(18,22,38,41,55)
                     /site_type="other"
                     /note="aromatic arch"
                     /db_xref="CDD:238456"
     Site            order(18,22,26,33,38..45)
                     /site_type="other"
                     /note="DCoH dimer interaction site [polypeptide binding]"
                     /db_xref="CDD:238456"
     Site            order(19..20,26..27,30,33..34)
                     /site_type="other"
                     /note="DCoH /HNF-1 dimer interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:238456"
     Site            order(19,26..27,30,34)
                     /site_type="other"
                     /note="DCoH tetramer interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:238456"
     Site            order(36..38,53,55..56)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238456"
ORIGIN      
        1 mwnkidnkly kafefkdfsa afsfmtrval laeksnhhpt wtntynkvei wlsthdagdk
       61 vtdkdkllad eidava
//
LOCUS       WP_258135255             498 aa            linear   BCT 02-MAR-2025
DEFINITION  RagB/SusD family nutrient uptake outer membrane protein
            [Mucilaginibacter phenanthrenivorans].
ACCESSION   WP_258135255
VERSION     WP_258135255.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter phenanthrenivorans
  ORGANISM  Mucilaginibacter phenanthrenivorans
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
REFERENCE   1  (residues 1 to 498)
  AUTHORS   Goulas,T., Garcia-Ferrer,I., Hutcherson,J.A., Potempa,B.A.,
            Potempa,J., Scott,D.A. and Gomis-Ruth,F.X.
  TITLE     Structure of RagB, a major immunodominant outer-membrane surface
            receptor antigen of Porphyromonas gingivalis
  JOURNAL   Mol Oral Microbiol 31 (6), 472-485 (2016)
   PUBMED   26441291
REFERENCE   2  (residues 1 to 498)
  AUTHORS   Bolam,D.N. and Koropatkin,N.M.
  TITLE     Glycan recognition by the Bacteroidetes Sus-like systems
  JOURNAL   Curr Opin Struct Biol 22 (5), 563-569 (2012)
   PUBMED   22819666
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF019592.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF07980.17
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Mucilaginibacter phenanthrenivorans"
                     /db_xref="taxon:1234842"
     Protein         1..498
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /calculated_mol_wt=55812
     Region          44..448
                     /region_name="SusD"
                     /note="starch binding outer membrane protein SusD;
                     cl21747"
                     /db_xref="CDD:451378"
ORIGIN      
        1 mkfnikkygi gvtllvllvt vssckkylde ksnsnfvknn yfktasqaqt fvngiysqlh
       61 lfqngdayge spfitlelfa ghatslgqsv nnsnvihqrt davnpgfedv wqnsynaian
      121 anlalqqipt igmdatlskk llgevyflra ffyyhlvrly gdvplittpv tidspdlypt
      181 rtdykkvydq iisdlqaaet sglpetdqtg rvslgavhtl lasvylttag ypmqatanya
      241 laaaeaqkvl tdytlftdya ylhdnahknq gelifqgqyl vgvatnaltq ltvpfnlnvg
      301 aygdhlgami ptdqfvasye agdlrtqerq fyfssypshd dptkiiqfge hclykffhve
      361 sangngicde nwtflrlpea mltyaeatne vsgptadava qvnkiraraq laplgtlskd
      421 afrqeiwker yhelayedka yfdiqrthmi ydvvnnkfgd alstaneqgv tmkeqyllwp
      481 ipqreintnk kltqnkdw
//
LOCUS       WP_258135276             482 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Mucilaginibacter phenanthrenivorans].
ACCESSION   WP_258135276
VERSION     WP_258135276.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter phenanthrenivorans
  ORGANISM  Mucilaginibacter phenanthrenivorans
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
REFERENCE   1  (residues 1 to 482)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Mucilaginibacter phenanthrenivorans"
                     /db_xref="taxon:1234842"
     Protein         1..482
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=51998
     Region          31..294
                     /region_name="GH43_Arb43a-like"
                     /note="Glycosyl hydrolase family 43 protein such as
                     Bacillus subtilis subsp. subtilis str. 168
                     endo-alpha-1,5-L-arabinanase Arb43A; cd08998"
                     /db_xref="CDD:350112"
     Site            order(31..33,49..50,73,136,157..158,188,208,216,285)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:350112"
     Region          375..>444
                     /region_name="RicinB_lectin_2"
                     /note="Ricin-type beta-trefoil lectin domain-like;
                     pfam14200"
                     /db_xref="CDD:464102"
ORIGIN      
        1 mklivkaisi islfsllrag saiaqvgkpf ihdpstiaec dgkyytfgtg ggglisedgw
       61 twnggavrpg ggaapdvlki gdrylivyga tggglagghn gkiltmwnkt ldpgspdfky
      121 seavvvassd giedndsidp gllldptdgk lwlsygtywg yirlveldpk tgkrvegnks
      181 lniaidceat dliyrdgwyy llgthgtccd gpnstynivv grskkitgpy ldnigremlk
      241 gggklvvaag drrigpghfg rsvvsdgvek ischyeadld qnarsvlgir pllwkngwpi
      301 agdtfkegty eieserrgya lqlgvdftrm pggmrfnrnn depvkpvssq elsdviktwp
      361 tgnivvnlsd ymfrphqkwt ispvagaggy lggpyykivi agtdralaat pdaelitvpk
      421 ftgapeqlwr idqltdgtyr impkvvsnpk gqlalvssgd stptlatfdm nsdnskwnfk
      481 th
//
LOCUS       WP_258135278             374 aa            linear   BCT 02-MAR-2025
DEFINITION  alpha/beta hydrolase-fold protein [Mucilaginibacter
            phenanthrenivorans].
ACCESSION   WP_258135278
VERSION     WP_258135278.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter phenanthrenivorans
  ORGANISM  Mucilaginibacter phenanthrenivorans
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
REFERENCE   1  (residues 1 to 374)
  AUTHORS   Goins,C.M., Dajnowicz,S., Smith,M.D., Parks,J.M. and Ronning,D.R.
  TITLE     Mycolyltransferase from Mycobacterium tuberculosis in covalent
            complex with tetrahydrolipstatin provides insights into antigen 85
            catalysis
  JOURNAL   J Biol Chem 293 (10), 3651-3662 (2018)
   PUBMED   29352107
REFERENCE   2  (residues 1 to 374)
  AUTHORS   van Straaten,K.E., Gonzalez,C.F., Valladares,R.B., Xu,X.,
            Savchenko,A.V. and Sanders,D.A.
  TITLE     The structure of a putative S-formylglutathione hydrolase from
            Agrobacterium tumefaciens
  JOURNAL   Protein Sci 18 (10), 2196-2202 (2009)
   PUBMED   19653299
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012958.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00756.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Mucilaginibacter phenanthrenivorans"
                     /db_xref="taxon:1234842"
     Protein         1..374
                     /product="alpha/beta hydrolase-fold protein"
                     /calculated_mol_wt=41021
     Region          52..133
                     /region_name="E_set_Esterase_N"
                     /note="N-terminal Early set domain associated with the
                     catalytic domain of esterase; cd02858"
                     /db_xref="CDD:199888"
     Region          94..374
                     /region_name="Fes"
                     /note="Enterochelin esterase or related enzyme [Inorganic
                     ion transport and metabolism]; COG2382"
                     /db_xref="CDD:441948"
ORIGIN      
        1 mnlkyltivv laaslagplc kaqtpsgeik ddfqasslnq pgqdyprvns qgyvrfsika
       61 pkadsirvtl glggrggtkl ikgtdgyftg tteapmdegf hyyhlivdgg ifndpgtlny
      121 ygstrwesgi eipahdqdfy altdvphgnv qqvlfpskst ntqrrafvyt ppgyekdksk
      181 kypvlylqhg wgedetawsn qghanlimdn liaegkakpf iivmtygmtn dvkpggirnf
      241 kidafetvlt delvpyvdan frtianrenr amaglsmggm ethlitlakp defayyglls
      301 ggtytpaelq dkpkaklifi scgskenptg vnkataalkd agynavsfis dntahefltw
      361 rrslkqlapl lfnn
//
LOCUS       WP_258135299             644 aa            linear   BCT 02-MAR-2025
DEFINITION  family 43 glycosylhydrolase [Mucilaginibacter phenanthrenivorans].
ACCESSION   WP_258135299
VERSION     WP_258135299.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter phenanthrenivorans
  ORGANISM  Mucilaginibacter phenanthrenivorans
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
REFERENCE   1  (residues 1 to 644)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.20
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Mucilaginibacter phenanthrenivorans"
                     /db_xref="taxon:1234842"
     Protein         1..644
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=71217
     Region          28..308
                     /region_name="GH43_62_32_68_117_130"
                     /note="Glycosyl hydrolase families: GH43, GH62, GH32,
                     GH68, GH117, CH130; cl14647"
                     /db_xref="CDD:449341"
     Region          334..510
                     /region_name="GH43_C2"
                     /note="Beta xylosidase C-terminal Concanavalin A-like
                     domain; pfam17851"
                     /db_xref="CDD:436093"
     Region          517..639
                     /region_name="CBM6_xylanase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); many are
                     appended to glycoside hydrolase (GH) family 11 and GH43
                     xylanase domains; cd04084"
                     /db_xref="CDD:271150"
     Site            order(533,542..543,603,633)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:271150"
ORIGIN      
        1 mllsapiciy aqtkptvdss sfyqtvqtyv npvlpgdhpd ptllqvgkdf yhcgssfhfn
       61 pylpvyhstd lvhwkiigrv lapakadwvt drpsagiwqg aityfygsyw iyfsangqwf
      121 srasspagpw sapvhlktdl etgnpgydns ifvdddskpy mlikngqkan rlhelgrdgq
      181 ltghlinldw vnahlqyswa egpvmckrnd vyyyfpagdv tggqyvlkss altgdstkwq
      241 rlgnffkpvt dphagfrhpn hisapvqlsd gtwwtlgqsy ekydgddwsg mgrqtslypv
      301 iwegdrpwgm apasqpivkp dlpqsgilwr svttdyfage apglcwhflt kassckyslt
      361 arkgwirlsp dsvrthivqk etdhfytvit rvdlaaadks akagiylsng gqtvigrlyt
      421 gysdgrkivl qldtairtlt npfgrtvwlk lvrnghqlsg yfsgdkkawt tlgapvsaik
      481 ldkaqpnyns wvgtsiglfa egkpadfdcf ickdgrsvlp avgysnyfgt aavsmgneka
      541 vtntsgkggw fmisgvetgr isplsvaltc ritartkiei wlddlqkgrl iatlnldasg
      601 srqwqvfskt ikgvtgqhdv fvrfipgtaq sayiksiqfg dhii
//
LOCUS       WP_258135319             250 aa            linear   BCT 02-MAR-2025
DEFINITION  M17 family peptidase N-terminal domain-containing protein
            [Mucilaginibacter phenanthrenivorans].
ACCESSION   WP_258135319
VERSION     WP_258135319.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter phenanthrenivorans
  ORGANISM  Mucilaginibacter phenanthrenivorans
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
REFERENCE   1  (residues 1 to 250)
  AUTHORS   Burley,S.K., David,P.R., Taylor,A. and Lipscomb,W.N.
  TITLE     Molecular structure of leucine aminopeptidase at 2.7-A resolution
  JOURNAL   Proc Natl Acad Sci U S A 87 (17), 6878-6882 (1990)
   PUBMED   2395881
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014808.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02789.23
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Mucilaginibacter phenanthrenivorans"
                     /db_xref="taxon:1234842"
     Protein         1..250
                     /product="M17 family peptidase N-terminal
                     domain-containing protein"
                     /GO_function="GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006508 - proteolysis [Evidence IEA]"
                     /calculated_mol_wt=26723
     Region          102..211
                     /region_name="Macro_SF"
                     /note="macrodomain superfamily; cl00019"
                     /db_xref="CDD:469581"
ORIGIN      
        1 miklftstgk prqqnfritf saflllitvn thlwaqntap rladvgttav lgkadgivfe
       61 akvqspsdqa tplqiicife ytegdmtgpq alpaaangll hvdqalngli tmlrksekfa
      121 ghaletllii ppkgtmpaqk illiglgnrd qfnpeimtsv grvgmrealr lgvssyshas
      181 dlkdaginsp tgavavnvvk galdayetee flvkkkvtth kpltkitila gqpffaptgd
      241 aikaylsikn
//
LOCUS       WP_258135326             579 aa            linear   BCT 02-MAR-2025
DEFINITION  thiamine pyrophosphate-dependent enzyme [Mucilaginibacter
            phenanthrenivorans].
ACCESSION   WP_258135326
VERSION     WP_258135326.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter phenanthrenivorans
  ORGANISM  Mucilaginibacter phenanthrenivorans
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
REFERENCE   1  (residues 1 to 579)
  AUTHORS   Arjunan,P., Umland,T., Dyda,F., Swaminathan,S., Furey,W., Sax,M.,
            Farrenkopf,B., Gao,Y., Zhang,D. and Jordan,F.
  TITLE     Crystal structure of the thiamin diphosphate-dependent enzyme
            pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at
            2.3 A resolution
  JOURNAL   J Mol Biol 256 (3), 590-600 (1996)
   PUBMED   8604141
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF014794.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF02775.26
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Mucilaginibacter phenanthrenivorans"
                     /db_xref="taxon:1234842"
     Protein         1..579
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_function="GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /calculated_mol_wt=62640
     Region          1..569
                     /region_name="PRK06546"
                     /note="pyruvate dehydrogenase; Provisional"
                     /db_xref="CDD:180614"
ORIGIN      
        1 mskkvaeqlv dmlvqagikr iyaitgdsln elndavrrnd qiqwvhvrhe eagayaaaae
       61 aelkglacca gssgpghihl inglydahra nvpvlaiast cattefgsgy fqetnitklf
      121 ddcshynqia ataaqlprmt qaaiqhavqr kgvavlglpg dvsamaaven issnknyfsk
      181 alirpsdedi agmaslinry qkvsiycgig aadahdevvq laeminapig ysfrgkmgiq
      241 ynnpyevgmt gllglpsayh smhesdliil lgtdfpyvpf mptdkkiiqv dlqperlgrr
      301 akldiglhgd ikttltalfp llnrkdddsf lkaqlhiygk vkehlniyve dkgaenaihp
      361 eavaacldkl atedaiftvd tgmccvwgar yiqatgkrhm lgsfthgsma namphaigaa
      421 lscpdrqvva mcgdggisml lgdlatikqy klpikiivfn nrslgmvkle mevaglpdse
      481 tdmenpdfsv iagamgikgi tinhpndlet slrqafehdg pvlvnvftdp nalamppkve
      541 lkmvkgmals mtrlmlggkf qevldtvksg ykhmgelld
//
LOCUS       WP_258135341             134 aa            linear   BCT 02-MAR-2025
DEFINITION  NAD-dependent epimerase/dehydratase family protein
            [Mucilaginibacter phenanthrenivorans].
ACCESSION   WP_258135341
VERSION     WP_258135341.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter phenanthrenivorans
  ORGANISM  Mucilaginibacter phenanthrenivorans
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
REFERENCE   1  (residues 1 to 134)
  AUTHORS   Thoden,J.B., Hegeman,A.D., Wesenberg,G., Chapeau,M.C., Frey,P.A.
            and Holden,H.M.
  TITLE     Structural analysis of UDP-sugar binding to UDP-galactose
            4-epimerase from Escherichia coli
  JOURNAL   Biochemistry 36 (21), 6294-6304 (1997)
   PUBMED   9174344
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF013530.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF01370.27
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Mucilaginibacter phenanthrenivorans"
                     /db_xref="taxon:1234842"
     Protein         1..134
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /calculated_mol_wt=14286
     Region          1..>88
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
ORIGIN      
        1 mkvfvtgatg fvgsaivqel ihsghqvigl srneasdkkl igagaqahrg dlnnldslrs
       61 gataadgvih tafnhdfskf kessendqld vkeavernia tmllnadngr arhrllqikn
      121 alespysgpe ipkl
//
LOCUS       WP_258135371             467 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase family 18 protein [Mucilaginibacter
            phenanthrenivorans].
ACCESSION   WP_258135371
VERSION     WP_258135371.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter phenanthrenivorans
  ORGANISM  Mucilaginibacter phenanthrenivorans
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
REFERENCE   1  (residues 1 to 467)
  AUTHORS   Perrakis,A., Tews,I., Dauter,Z., Oppenheim,A.B., Chet,I.,
            Wilson,K.S. and Vorgias,C.E.
  TITLE     Crystal structure of a bacterial chitinase at 2.3 A resolution
  JOURNAL   Structure 2 (12), 1169-1180 (1994)
   PUBMED   7704527
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012907.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00704.34
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Mucilaginibacter phenanthrenivorans"
                     /db_xref="taxon:1234842"
     Protein         1..467
                     /product="glycosyl hydrolase family 18 protein"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=50139
     Region          56..328
                     /region_name="GH18_chitinase-like"
                     /note="The GH18 (glycosyl hydrolase, family 18) type II
                     chitinases hydrolyze chitin, an abundant polymer of
                     beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a
                     major component of the cell wall of fungi and the
                     exoskeleton of arthropods. Chitinases have...; cl10447"
                     /db_xref="CDD:471972"
     Site            order(58,82,157,159,161,218..219,255,312)
                     /site_type="active"
                     /db_xref="CDD:119349"
     Region          345..463
                     /region_name="beta-trefoil_FSCN_ZgPorA-like"
                     /note="fascin-like domain, beta-trefoil fold, found in
                     Zobellia galactanivorans beta-porphyranase A (PorA) and
                     similar proteins; cd23342"
                     /db_xref="CDD:467450"
ORIGIN      
        1 mkakfnlylf sgvlatlfal sschkedkad yapktvdlsa kntqtpmpvt aatfkvvgyl
       61 pswegdvssi qfsklthiny afltpttsgg lnpldnlakf tslvsaahtn nvkvmisvgg
      121 ggggdafhti vassslrtaf vnnmvgfvnq ynvdgvdvdw efpsagtean nfllmmqqla
      181 tamhnsgrlc tiavistgat yitsgmfttl dwlnimdydd nnfqhstyqs avdclnywsg
      241 rglplektil gvpfygrdnr ydyltvnynv ilseggspns dtfqtigyng iptitsktnl
      301 sfdrgiggmm iwelagdatg ansllsaiht aivahsggst nppigqtitl kgfnneyvsg
      361 engtqamncn rptasawetf tvvdagagki alrsmgkyvs sengtqaitc nrttfsdwek
      421 fdwvpttdgk itlrgnngkf issengtqam tcnrttasgw eafginq
//
LOCUS       WP_258135504             681 aa            linear   BCT 02-MAR-2025
DEFINITION  HRDC domain-containing protein [Mucilaginibacter
            phenanthrenivorans].
ACCESSION   WP_258135504
VERSION     WP_258135504.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter phenanthrenivorans
  ORGANISM  Mucilaginibacter phenanthrenivorans
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
REFERENCE   1  (residues 1 to 681)
  AUTHORS   Huang,L., Hua,X., Lu,H., Gao,G., Tian,B., Shen,B. and Hua,Y.
  TITLE     Three tandem HRDC domains have synergistic effect on the RecQ
            functions in Deinococcus radiodurans
  JOURNAL   DNA Repair (Amst) 6 (2), 167-176 (2007)
   PUBMED   17085080
REFERENCE   2  (residues 1 to 681)
  AUTHORS   Wu,L., Chan,K.L., Ralf,C., Bernstein,D.A., Garcia,P.L., Bohr,V.A.,
            Vindigni,A., Janscak,P., Keck,J.L. and Hickson,I.D.
  TITLE     The HRDC domain of BLM is required for the dissolution of double
            Holliday junctions
  JOURNAL   EMBO J 24 (14), 2679-2687 (2005)
   PUBMED   15990871
REFERENCE   3  (residues 1 to 681)
  AUTHORS   Liu,Z., Macias,M.J., Bottomley,M.J., Stier,G., Linge,J.P.,
            Nilges,M., Bork,P. and Sattler,M.
  TITLE     The three-dimensional structure of the HRDC domain and implications
            for the Werner and Bloom syndrome proteins
  JOURNAL   Structure 7 (12), 1557-1566 (1999)
   PUBMED   10647186
REFERENCE   4  (residues 1 to 681)
  AUTHORS   Morozov,V., Mushegian,A.R., Koonin,E.V. and Bork,P.
  TITLE     A putative nucleic acid-binding domain in Bloom's and Werner's
            syndrome helicases
  JOURNAL   Trends Biochem Sci 22 (11), 417-418 (1997)
   PUBMED   9397680
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF012779.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF00570.28
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Mucilaginibacter phenanthrenivorans"
                     /db_xref="taxon:1234842"
     Protein         1..681
                     /product="HRDC domain-containing protein"
                     /GO_function="GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /calculated_mol_wt=76383
     Region          <16..436
                     /region_name="RecD"
                     /note="ATPase/5#-3# helicase helicase subunit RecD of the
                     DNA repair enzyme RecBCD (exonuclease V) [Replication,
                     recombination and repair]; COG0507"
                     /db_xref="CDD:440273"
     Region          597..663
                     /region_name="HRDC"
                     /note="HRDC domain; pfam00570"
                     /db_xref="CDD:425755"
ORIGIN      
        1 mdtsakpeld milapadnmt elnpvmqlay dyltdtntiv fltgkagtgk ttflqrvkqe
       61 skkklavvap tgvaainagg mtihslfqip fgpiipggns rpdahystek kellsslell
      121 iidevsmvrp dvldqidlil rnlkdcahpf ggvqllligd lsqlspiird eewimlnryy
      181 atpyffssqv mqkapfvrie lnhvfrqkeq afvdilnevr nqtissssle llnarhlpgf
      241 rptieepyit ltthnslaqq insefvevld geefefkati rgefpkdayp tetnlklkig
      301 aqvmfvknhg saeklfyngk igtviriend tvfvqcgneg reiavqavew tnikyqleeq
      361 qisetnagsf aqiplklawa itihksqgls fdraiidvse afthgqayva lsrcrtlsgm
      421 vlrnpittqn iigdpaislf neqakalqpd alkleqdrel yklfliself nfnglktkva
      481 gfeelipdlq kdilgvsgkf trqlapervq kaavyfyekl ksaievlhgq lpgmigqske
      541 kaakadrlin wmmvrmelmd cfstvdftpf tyldrkknga ttqtssylki lnakpnekly
      601 defltwrnvi aekeqimpnm vlsektlaav aeklpstlkl isaikgvgpq ktnqygtdli
      661 tlirsyqqke qgsdteqksl f
//
LOCUS       WP_258135511            1076 aa            linear   BCT 02-MAR-2025
DEFINITION  glycosyl hydrolase [Mucilaginibacter phenanthrenivorans].
ACCESSION   WP_258135511
VERSION     WP_258135511.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter phenanthrenivorans
  ORGANISM  Mucilaginibacter phenanthrenivorans
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
REFERENCE   1  (residues 1 to 1076)
  AUTHORS   Miyata,T., Kashige,N., Satho,T., Yamaguchi,T., Aso,Y. and Miake,F.
  TITLE     Cloning, sequence analysis, and expression of the gene encoding
            Sphingomonas paucimobilis FP2001 alpha-L -rhamnosidase
  JOURNAL   Curr Microbiol 51 (2), 105-109 (2005)
   PUBMED   15991055
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF028442.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF17132.9
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Mucilaginibacter phenanthrenivorans"
                     /db_xref="taxon:1234842"
     Protein         1..1076
                     /product="glycosyl hydrolase"
                     /calculated_mol_wt=120233
     Region          41..873
                     /region_name="Glyco_hydro_106"
                     /note="alpha-L-rhamnosidase; pfam17132"
                     /db_xref="CDD:435739"
     Region          958..>1033
                     /region_name="LacZ"
                     /note="Beta-galactosidase/beta-glucuronidase [Carbohydrate
                     transport and metabolism]; COG3250"
                     /db_xref="CDD:442481"
ORIGIN      
        1 mrifpfiicf lvickissgq nsaippyrse dfktieagfi tapdsiqtsv ywywlsgnvs
       61 kqgvvedlea mkkvginraf igniglndvq qgkvkflsde wwdilhtalk iatrlnikig
      121 ifngpgwsqs ggpwvrsdqt mryltssqvm vkgpvlfnkq lvkpqvnfhd vkvlaypvpa
      181 dyntdisvlk pklsseqpid slnnlmdnni ttgihfknne pfsidinttk pytlrsvtis
      241 vlhqavyfeg diqvkvnnay vtvkhftvdr rspalnfgfl pwaesaisvp vttsanfrls
      301 ltkisgnsgi selklsstsm vdsymektla kawqtedliw nayvwgmqsn ehskyvidpt
      361 kvidvskyma adgtlnwkvp agnwmiersg mvptnmhnep atpeatgyet dkmskqhise
      421 hfdayigqil krippedrkt ftvvvadsye tgsqnwtdll ipefkrkyny dptpfipvlq
      481 gkvvgnpdvs drflwdlrrl iaddaafnyv ggltevshkh glttwlenyg yfgfpaeflq
      541 yggqsdevag efwgggrlgt venraassaa hiygkikvss esftsadnsw raypgmlkpr
      601 gdrfftdgvn ntllhvfihq pdstakpgis awfgtefnra ntwffdmdif lkylkrcnlm
      661 lqqgqyvadv ayfigedapr lmggtdpalp kgysfdying dviknklsvk ngklmlpngi
      721 sysilvlpkl ttirpellsk irelvqngav vlgpkpersp slegypqvdk qiksmadelw
      781 gnidstknkv nhygkglvis gmnmqealdl vkaipdfkvn sdsvlfihrq lkdgsiyfis
      841 nqknkpisit adfrsvgkkp elwdavtgdv rdlpsfhqtg ittlvpikla angsefivfr
      901 kegttgdttk snypvakksi disthwtvtf dnkmrgpekp vifntltdws vnandsikyy
      961 sgaayyrnif kidklekgan yvidlgmakd iakitvngie vggvwtppyl lditralkpg
     1021 enkleikivn twtnrlmgdk llpadqrkts tlffpdpghg lessgllgpv kidvfn
//
LOCUS       WP_258135560             190 aa            linear   BCT 02-MAR-2025
DEFINITION  DUF6580 family putative transport protein [Mucilaginibacter
            phenanthrenivorans].
ACCESSION   WP_258135560
VERSION     WP_258135560.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter phenanthrenivorans
  ORGANISM  Mucilaginibacter phenanthrenivorans
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF042461.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF20221.3
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Mucilaginibacter phenanthrenivorans"
                     /db_xref="taxon:1234842"
     Protein         1..190
                     /product="DUF6580 family putative transport protein"
                     /calculated_mol_wt=21094
     Region          4..182
                     /region_name="DUF6580"
                     /note="Family of unknown function (DUF6580); pfam20221"
                     /db_xref="CDD:466372"
ORIGIN      
        1 msaktinirt ivlilivlaa tamrlvsfky pflsnftpvg aialfggayf npkwkayviv
       61 llslflsdil inylytskwv llysgslwly lcfaimvfvg slikkvnvln vflasfasva
      121 ihwlimdlpw lygtlyphtl agygtsliaa lpfeknmilg diifgailfg gfelaktkyt
      181 ilrtnkelav
//
LOCUS       WP_258135577             433 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Mucilaginibacter
            phenanthrenivorans].
ACCESSION   WP_258135577
VERSION     WP_258135577.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter phenanthrenivorans
  ORGANISM  Mucilaginibacter phenanthrenivorans
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024823.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13431.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Mucilaginibacter phenanthrenivorans"
                     /db_xref="taxon:1234842"
     Protein         1..433
                     /product="tetratricopeptide repeat protein"
                     /calculated_mol_wt=47354
     Region          128..>347
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          242..270
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(243,246..247,250..251,253,277,280..281,284..285,
                     287..288,336,339..340,343..344,347)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          275..330
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          313..394
                     /region_name="PilF"
                     /note="Type IV pilus assembly protein PilF/PilW [Cell
                     motility, Extracellular structures]; COG3063"
                     /db_xref="CDD:442297"
ORIGIN      
        1 mkikflmtcl lglasattfa qkgelkdaqs nydgytvtis ggakakilvd kamaslkdak
       61 tsidkasvne ktanmpqtya lkaaiyaala vndtvtttsa plfstaddav kkakeldtkn
      121 efktlidaan inlaqyklta gvkdyqnkky eeaykefdyy rtvlpedtna vyytalsatn
      181 agekdpkyyq laltnykklv tlkysgnaka yldmssiyla vkdtagalka tsegitkypa
      241 sselrkreie ialqsgkqse vvakiqsait ndpknkelyy ylaltysnlg daanaksakd
      301 kdaaaktsdh ntaldnyaka teaykkalei dpnyfeanmn lgyvlmrpal difnaaqalp
      361 sskqkeyeae lkksdsmldl akpylqkave ikpkdkdalt nlrsyyraks dpataadska
      421 kaadlkkqid alq
//
LOCUS       WP_258135597             913 aa            linear   BCT 02-MAR-2025
DEFINITION  putative LPS assembly protein LptD [Mucilaginibacter
            phenanthrenivorans].
ACCESSION   WP_258135597
VERSION     WP_258135597.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter phenanthrenivorans
  ORGANISM  Mucilaginibacter phenanthrenivorans
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF040057.5
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF19838.5
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..913
                     /organism="Mucilaginibacter phenanthrenivorans"
                     /db_xref="taxon:1234842"
     Protein         1..913
                     /product="putative LPS assembly protein LptD"
                     /calculated_mol_wt=101625
     Region          229..713
                     /region_name="LptD_2"
                     /note="LptD protein; pfam19838"
                     /db_xref="CDD:466203"
ORIGIN      
        1 mkfislffll atiltanvma ssrnvstyvf tlqtdslkka dtskttkvtk gkkskanagk
       61 knaaakndtt kngsngglqs qvtshaedsv itdkvhdity lygrarvtye dfeldadyir
      121 ldqknhlifa kgstdpitkr yvgrpiskqs kdkpvesdsl lfdyktkkgr vfnpaseqdg
      181 nylsggeikk lnetevayrn ttfstcdlpq pdthfgivit kgigeknrii sgpayleieg
      241 iplplaipfg ffpkpdqras gviiptfged qklgfylrnf gyyigfsdyl dlttmgtvys
      301 kgsyelntta hylqrykygg tvslsygshn yglegdpaqk dfnitwshsq dpnahpgstf
      361 sasvnagtst yyrndpaqnn ynlnsltqnn lrssinyskt wdgtpfnlsv glshsqdltn
      421 ktvtlqlptl sftmasinpf dskdrvgeqk wyqkltvsys lqatnevdai peaqlfkgst
      481 lskklqsrav hqipvglsln vlkyfqfsss vnytdhwylq tinksyirgg vtkdgvvidp
      541 tqpvidtisg fkragsynls tglstklyst infkkgniia irhvmtptis fnynpdfsdp
      601 sygyykrivs naaipyptqs qlysifpdgf psagkqagis lsvdntiqmk lkpkttdtsg
      661 karkvnlldg fsvstfynfa qdslklspis fsahtailnq kvnlslygsf npyetlvldt
      721 isngviqkyt reinrytfqd gkfpmlttis fsmsgslnst tfkphvpvtp gstlqtitpq
      781 qaqklafins dpsqyidfnv pwnlafnynf sfnnniintn stntvmlsgd vsitskwkiq
      841 yntnfdlrag klavssfsiy rdlhcwdlnv qwvpfgiyks ynvtlkvkaa ilqdlklskr
      901 sdytsssyfn gnq
//
LOCUS       WP_258135627             114 aa            linear   BCT 02-MAR-2025
DEFINITION  tetratricopeptide repeat protein [Mucilaginibacter
            phenanthrenivorans].
ACCESSION   WP_258135627
VERSION     WP_258135627.1
KEYWORDS    RefSeq.
SOURCE      Mucilaginibacter phenanthrenivorans
  ORGANISM  Mucilaginibacter phenanthrenivorans
            Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
            Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF024572.6
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF13174.12
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Mucilaginibacter phenanthrenivorans"
                     /db_xref="taxon:1234842"
     Protein         1..114
                     /product="tetratricopeptide repeat protein"
                     /GO_function="GO:0005515 - protein binding [Evidence IEA]"
                     /calculated_mol_wt=13243
     Region          <2..86
                     /region_name="HemYx"
                     /note="Uncharacterized protein HemY, contains HemY_N
                     domain and TPR repeats (unrelated to protoporphyrinogen
                     oxidase HemY) [Function unknown]; COG3071"
                     /db_xref="CDD:442305"
     Region          19..49
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          54..78
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
ORIGIN      
        1 mqisrlekll efiknepddp flkyalatey lrinetdkal ayyedlvnnh rsyvgtyyhl
       61 gklyealdrk qdaintyetg mlvsreqrdn hafselqgvy naltgfgddd dddy
//
LOCUS       WP_258135672             412 aa            linear   BCT 02-MAR-2025
DEFINITION  nucleoside recognition domain-conta